Mercurial > repos > dereeper > sniplay
comparison test-data/vcf2fastaAndHapmap-reference.gff @ 4:10627af23f10 draft
planemo upload
| author | gandres |
|---|---|
| date | Tue, 15 Dec 2015 05:18:02 -0500 |
| parents | |
| children |
comparison
equal
deleted
inserted
replaced
| 3:345f88a8f483 | 4:10627af23f10 |
|---|---|
| 1 ##gff-version 3 | |
| 2 chr1 manual_curation gene 390 1820 . - . ID=GSCOCG00012439001;Name=Cc01_g00010 | |
| 3 chr1 manual_curation mRNA 390 1820 . - . ID=GSCOCT00012439001;Parent=GSCOCG00012439001;Name=Cc01_g00010 | |
| 4 chr1 manual_curation polypeptide 390 1820 . - . ID=GSCOCP00012439001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q7XA40,SwissProt:Q7XBQ9,SwissProt:Q9LRR4,TAIR:AT1G50180.1,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TrEMBL:B9GZ62,TrEMBL:B9IBB8,TrEMBL:B9NBB7;Derives_from=GSCOCT00012439001;Name=Cc01_g00010;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance protein RGA3,CC_functional_completeness:fragment,CC_gene:RGA3,CC_gene:RPPL1,CC_gene:RGA2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012439001~ Putative disease resistance protein RGA3~ RGA3~ fragment;original_location=join(390862..390909%2C390964..392292);owner=coffea | |
| 5 chr1 manual_curation exon 1773 1820 . - . Parent=GSCOCT00012439001 | |
| 6 chr1 manual_curation exon 390 1718 . - . Parent=GSCOCT00012439001 | |
| 7 chr1 manual_curation CDS 1773 1820 . - 0 Parent=GSCOCT00012439001 | |
| 8 chr1 manual_curation CDS 390 1718 . - 0 Parent=GSCOCT00012439001 | |
| 9 chr1 manual_curation gene 4545 12431 . - . ID=GSCOCG00012438001;Name=Cc01_g00020 | |
| 10 chr1 manual_curation mRNA 4545 12431 . - . ID=GSCOCT00012438001;Parent=GSCOCG00012438001;Name=Cc01_g00020 | |
| 11 chr1 manual_curation polypeptide 5023 10877 . - . ID=GSCOCP00012438001;Dbxref=GENE3D:G3DSA:2.30.30.30,GENE3D:G3DSA:2.40.50.140,InterPro:IPR001059,InterPro:IPR008991,InterPro:IPR012340,InterPro:IPR013185,InterPro:IPR013852,InterPro:IPR014722,InterPro:IPR015365,InterPro:IPR016027,InterPro:IPR020599,PFAM:PF01132,PFAM:PF08207,PFAM:PF09285,PIR:PIRSF005901,PROSITE:PS01275,SMART:SM00841,SUPERFAMILY:SSF50104,SUPERFAMILY:SSF50249,SwissProt:A9H6E1,SwissProt:Q0BT69,SwissProt:Q5FUC7,TAIR:AT3G08740.1,TAIR:AT4G26310.2,TrEMBL:D7SLK8,TrEMBL:I1PGI0,TrEMBL:Q84M44;Derives_from=GSCOCT00012438001;Name=Cc01_g00020;Ontology_term=CC_evidence_code:ISS,GO:0003746,GO:0006414,CC_EC_number:missing_EC_number,PRODUCT:Putative Elongation factor P,CC_functional_completeness:complete,CC_gene:efp;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012438001~ Putative Elongation factor P~ efp~ complete;original_location=join(381805..381822%2C382048..382098%2C383122..383191%2C384170..384236%2C384325..384392%2C384571..384694%2C385829..385868%2C387202..387269%2C387653..387659);owner=coffea | |
| 12 chr1 manual_curation exon 12138 12431 . - . Parent=GSCOCT00012438001 | |
| 13 chr1 manual_curation exon 10860 10890 . - . Parent=GSCOCT00012438001 | |
| 14 chr1 manual_curation exon 10584 10634 . - . Parent=GSCOCT00012438001 | |
| 15 chr1 manual_curation exon 9491 9560 . - . Parent=GSCOCT00012438001 | |
| 16 chr1 manual_curation exon 8446 8512 . - . Parent=GSCOCT00012438001 | |
| 17 chr1 manual_curation exon 8290 8357 . - . Parent=GSCOCT00012438001 | |
| 18 chr1 manual_curation exon 7988 8111 . - . Parent=GSCOCT00012438001 | |
| 19 chr1 manual_curation exon 6814 6853 . - . Parent=GSCOCT00012438001 | |
| 20 chr1 manual_curation exon 5413 5480 . - . Parent=GSCOCT00012438001 | |
| 21 chr1 manual_curation exon 4545 5029 . - . Parent=GSCOCT00012438001 | |
| 22 chr1 manual_curation CDS 10860 10877 . - 0 Parent=GSCOCT00012438001 | |
| 23 chr1 manual_curation CDS 10584 10634 . - 0 Parent=GSCOCT00012438001 | |
| 24 chr1 manual_curation CDS 9491 9560 . - 0 Parent=GSCOCT00012438001 | |
| 25 chr1 manual_curation CDS 8446 8512 . - 1 Parent=GSCOCT00012438001 | |
| 26 chr1 manual_curation CDS 8290 8357 . - 2 Parent=GSCOCT00012438001 | |
| 27 chr1 manual_curation CDS 7988 8111 . - 1 Parent=GSCOCT00012438001 | |
| 28 chr1 manual_curation CDS 6814 6853 . - 2 Parent=GSCOCT00012438001 | |
| 29 chr1 manual_curation CDS 5413 5480 . - 0 Parent=GSCOCT00012438001 | |
| 30 chr1 manual_curation CDS 5023 5029 . - 2 Parent=GSCOCT00012438001 | |
| 31 chr1 manual_curation gene 13982 33973 . + . ID=GSCOCG00012437001;Name=Cc01_g00030 | |
| 32 chr1 manual_curation mRNA 13982 33973 . + . ID=GSCOCT00012437001;Parent=GSCOCG00012437001;Name=Cc01_g00030 | |
| 33 chr1 manual_curation polypeptide 13982 33499 . + . ID=GSCOCP00012437001;Dbxref=InterPro:IPR009401,PFAM:PF06333,SwissProt:A2VCZ5,SwissProt:F4I096,SwissProt:Q54S20,TAIR:AT1G55325.2,TrEMBL:B9GY64,TrEMBL:F4I095,TrEMBL:F6GUN3;Derives_from=GSCOCT00012437001;Name=Cc01_g00030;Ontology_term=CC_evidence_code:ISS,GO:0006357,GO:0016455,GO:0016592,CC_EC_number:missing_EC_number,PRODUCT:Mediator of RNA polymerase II transcription subunit 13 homolog,CC_functional_completeness:complete,CC_gene:GCT,CC_gene:amiB,CC_gene:zgc;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012437001~ Mediator of RNA polymerase II transcription subunit 13 homolog~ GCT~ complete;original_location=complement(join(378677..378700%2C377380..377453%2C377153..377292%2C376952..377038%2C376485..376572%2C376223..376306%2C375435..375512%2C375257..375336%2C374568..374646%2C374117..374434%2C373726..373788%2C373373..373655%2C371449..371697%2C369315..370682%2C368380..368578%2C368139..368271%2C367423..367510%2C367170..367248%2C366719..367014%2C364749..365850%2C361906..362268%2C359183..359793));owner=coffea | |
| 34 chr1 manual_curation exon 32889 33973 . + . Parent=GSCOCT00012437001 | |
| 35 chr1 manual_curation exon 30414 30776 . + . Parent=GSCOCT00012437001 | |
| 36 chr1 manual_curation exon 26832 27933 . + . Parent=GSCOCT00012437001 | |
| 37 chr1 manual_curation exon 25668 25963 . + . Parent=GSCOCT00012437001 | |
| 38 chr1 manual_curation exon 25434 25512 . + . Parent=GSCOCT00012437001 | |
| 39 chr1 manual_curation exon 25172 25259 . + . Parent=GSCOCT00012437001 | |
| 40 chr1 manual_curation exon 24411 24543 . + . Parent=GSCOCT00012437001 | |
| 41 chr1 manual_curation exon 24104 24302 . + . Parent=GSCOCT00012437001 | |
| 42 chr1 manual_curation exon 22000 23367 . + . Parent=GSCOCT00012437001 | |
| 43 chr1 manual_curation exon 20985 21233 . + . Parent=GSCOCT00012437001 | |
| 44 chr1 manual_curation exon 19027 19309 . + . Parent=GSCOCT00012437001 | |
| 45 chr1 manual_curation exon 18894 18956 . + . Parent=GSCOCT00012437001 | |
| 46 chr1 manual_curation exon 18248 18565 . + . Parent=GSCOCT00012437001 | |
| 47 chr1 manual_curation exon 18036 18114 . + . Parent=GSCOCT00012437001 | |
| 48 chr1 manual_curation exon 17346 17425 . + . Parent=GSCOCT00012437001 | |
| 49 chr1 manual_curation exon 17170 17247 . + . Parent=GSCOCT00012437001 | |
| 50 chr1 manual_curation exon 16376 16459 . + . Parent=GSCOCT00012437001 | |
| 51 chr1 manual_curation exon 16110 16197 . + . Parent=GSCOCT00012437001 | |
| 52 chr1 manual_curation exon 15644 15730 . + . Parent=GSCOCT00012437001 | |
| 53 chr1 manual_curation exon 15390 15529 . + . Parent=GSCOCT00012437001 | |
| 54 chr1 manual_curation exon 15229 15302 . + . Parent=GSCOCT00012437001 | |
| 55 chr1 manual_curation exon 13982 14005 . + . Parent=GSCOCT00012437001 | |
| 56 chr1 manual_curation CDS 32889 33499 . + 1 Parent=GSCOCT00012437001 | |
| 57 chr1 manual_curation CDS 30414 30776 . + 1 Parent=GSCOCT00012437001 | |
| 58 chr1 manual_curation CDS 26832 27933 . + 0 Parent=GSCOCT00012437001 | |
| 59 chr1 manual_curation CDS 25668 25963 . + 1 Parent=GSCOCT00012437001 | |
| 60 chr1 manual_curation CDS 25434 25512 . + 0 Parent=GSCOCT00012437001 | |
| 61 chr1 manual_curation CDS 25172 25259 . + 2 Parent=GSCOCT00012437001 | |
| 62 chr1 manual_curation CDS 24411 24543 . + 1 Parent=GSCOCT00012437001 | |
| 63 chr1 manual_curation CDS 24104 24302 . + 0 Parent=GSCOCT00012437001 | |
| 64 chr1 manual_curation CDS 22000 23367 . + 0 Parent=GSCOCT00012437001 | |
| 65 chr1 manual_curation CDS 20985 21233 . + 0 Parent=GSCOCT00012437001 | |
| 66 chr1 manual_curation CDS 19027 19309 . + 2 Parent=GSCOCT00012437001 | |
| 67 chr1 manual_curation CDS 18894 18956 . + 2 Parent=GSCOCT00012437001 | |
| 68 chr1 manual_curation CDS 18248 18565 . + 2 Parent=GSCOCT00012437001 | |
| 69 chr1 manual_curation CDS 18036 18114 . + 1 Parent=GSCOCT00012437001 | |
| 70 chr1 manual_curation CDS 17346 17425 . + 2 Parent=GSCOCT00012437001 | |
| 71 chr1 manual_curation CDS 17170 17247 . + 2 Parent=GSCOCT00012437001 | |
| 72 chr1 manual_curation CDS 16376 16459 . + 2 Parent=GSCOCT00012437001 | |
| 73 chr1 manual_curation CDS 16110 16197 . + 1 Parent=GSCOCT00012437001 | |
| 74 chr1 manual_curation CDS 15644 15730 . + 1 Parent=GSCOCT00012437001 | |
| 75 chr1 manual_curation CDS 15390 15529 . + 2 Parent=GSCOCT00012437001 | |
| 76 chr1 manual_curation CDS 15229 15302 . + 0 Parent=GSCOCT00012437001 | |
| 77 chr1 manual_curation CDS 13982 14005 . + 0 Parent=GSCOCT00012437001 | |
| 78 chr1 manual_curation gene 36982 39766 . + . ID=GSCOCG00012436001;Name=Cc01_g00040 | |
| 79 chr1 manual_curation mRNA 36982 39766 . + . ID=GSCOCT00012436001;Parent=GSCOCG00012436001;Name=Cc01_g00040 | |
| 80 chr1 manual_curation polypeptide 37175 39395 . + . ID=GSCOCP00012436001;Dbxref=InterPro:IPR003480,PFAM:PF02458,SwissProt:Q5H873,SwissProt:Q8GT20,SwissProt:Q8GT21,TAIR:AT3G03480.1,TAIR:AT5G17540.1,TAIR:AT5G41040.1,TrEMBL:Q43583,TrEMBL:Q5I2Q5,TrEMBL:Q6E593;Derives_from=GSCOCT00012436001;Name=Cc01_g00040;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.3.1.162,PRODUCT:Benzyl alcohol O-benzoyltransferase,CC_functional_completeness:complete,CC_gene:HSR201,CC_gene:HMT/HLT;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012436001~ Benzyl alcohol O-benzoyltransferase~ HSR201~ complete;original_location=complement(join(355061..355507%2C353287..354222));owner=coffea | |
| 81 chr1 manual_curation exon 38460 39766 . + . Parent=GSCOCT00012436001 | |
| 82 chr1 manual_curation exon 36982 37621 . + . Parent=GSCOCT00012436001 | |
| 83 chr1 manual_curation CDS 38460 39395 . + 0 Parent=GSCOCT00012436001 | |
| 84 chr1 manual_curation CDS 37175 37621 . + 0 Parent=GSCOCT00012436001 | |
| 85 chr1 manual_curation gene 76277 77218 . - . ID=GSCOCG00012435001;Name=Cc01_g00050 | |
| 86 chr1 manual_curation mRNA 76277 77218 . - . ID=GSCOCT00012435001;Parent=GSCOCG00012435001;Name=Cc01_g00050 | |
| 87 chr1 manual_curation polypeptide 76911 77099 . - . ID=GSCOCP00012435001;Dbxref=TAIR:AT5G56540.1;Derives_from=GSCOCT00012435001;Name=Cc01_g00050;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:arabinogalactan protein 14,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012435001~ arabinogalactan protein 14~ unknown_gene~ complete;original_location=315583..315771;owner=coffea | |
| 88 chr1 manual_curation exon 76277 77218 . - . Parent=GSCOCT00012435001 | |
| 89 chr1 manual_curation CDS 76911 77099 . - 0 Parent=GSCOCT00012435001 | |
| 90 chr1 manual_curation gene 83279 85762 . + . ID=GSCOCG00012434001;Name=Cc01_g00060 | |
| 91 chr1 manual_curation mRNA 83279 85762 . + . ID=GSCOCT00012434001;Parent=GSCOCG00012434001;Name=Cc01_g00060 | |
| 92 chr1 manual_curation polypeptide 83826 85370 . + . ID=GSCOCP00012434001;Dbxref=InterPro:IPR012438,PFAM:PF07797,TAIR:AT1G55340.1,TAIR:AT3G03880.1,TAIR:AT4G20300.2,TrEMBL:A5BD63,TrEMBL:B9IPQ6,TrEMBL:D7TI71;Derives_from=GSCOCT00012434001;Name=Cc01_g00060;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF1639),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012434001~ Protein of unknown function (DUF1639)~ unknown_gene~ complete;original_location=complement(join(308618..308856%2C307691..307976%2C307479..307556%2C307312..307362));owner=coffea | |
| 93 chr1 manual_curation exon 83509 83569 . + . Parent=GSCOCT00012434001 | |
| 94 chr1 manual_curation exon 83279 83401 . + . Parent=GSCOCT00012434001 | |
| 95 chr1 manual_curation exon 85320 85762 . + . Parent=GSCOCT00012434001 | |
| 96 chr1 manual_curation exon 85126 85203 . + . Parent=GSCOCT00012434001 | |
| 97 chr1 manual_curation exon 84706 84991 . + . Parent=GSCOCT00012434001 | |
| 98 chr1 manual_curation exon 83730 84064 . + . Parent=GSCOCT00012434001 | |
| 99 chr1 manual_curation CDS 85320 85370 . + 0 Parent=GSCOCT00012434001 | |
| 100 chr1 manual_curation CDS 85126 85203 . + 0 Parent=GSCOCT00012434001 | |
| 101 chr1 manual_curation CDS 84706 84991 . + 2 Parent=GSCOCT00012434001 | |
| 102 chr1 manual_curation CDS 83826 84064 . + 0 Parent=GSCOCT00012434001 | |
| 103 chr1 manual_curation gene 87508 106373 . - . ID=GSCOCG00012432001;Name=Cc01_g00070 | |
| 104 chr1 manual_curation mRNA 87508 106373 . - . ID=GSCOCT00012432001;Parent=GSCOCG00012432001;Name=Cc01_g00070 | |
| 105 chr1 manual_curation polypeptide 87508 105526 . - . ID=GSCOCP00012432001;Dbxref=InterPro:IPR000169,InterPro:IPR001300,InterPro:IPR008985,InterPro:IPR022682,InterPro:IPR022683,InterPro:IPR022684,PFAM:PF00648,PFAM:PF01067,PRINTS:PR00704,PROFILE:PS50203,PROSITE:PS00139,SMART:SM00230,SMART:SM00720,SUPERFAMILY:SSF49758,SUPERFAMILY:SSF49899,SwissProt:Q11002,SwissProt:Q92177,SwissProt:Q9D805,TAIR:AT1G55350.5,TrEMBL:B9SBQ0,TrEMBL:D7SLL2,TrEMBL:Q6SSJ2;Derives_from=GSCOCT00012432001;Name=Cc01_g00070;Ontology_term=CC_evidence_code:ISS,GO:0004197,GO:0004198,GO:0005622,GO:0006508,CC_EC_number:3.4.22.52,PRODUCT:calpain-type cysteine protease family,CC_functional_completeness:complete,CC_gene:CAPN3,CC_gene:Capn9,CC_gene:CalpA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012432001~ calpain-type cysteine protease family~ CAPN3~ complete;original_location=join(287156..287274%2C289559..289809%2C291537..291719%2C291822..291981%2C292218..292348%2C292502..292616%2C292704..293685%2C293802..293912%2C294255..294334%2C295016..295067%2C295511..295611%2C296065..296227%2C297086..297359%2C297474..297624%2C297763..297874%2C297974..298139%2C298251..298321%2C298489..298580%2C298707..298869%2C298983..299054%2C300452..300829%2C300922..301037%2C301185..301482%2C301748..302067%2C302266..302617%2C302777..303064%2C303187..303291%2C303432..303560%2C303792..304172%2C304264..304401%2C304536..304772%2C304869..305174);owner=coffea | |
| 106 chr1 manual_curation exon 105901 106373 . - . Parent=GSCOCT00012432001 | |
| 107 chr1 manual_curation exon 105408 105565 . - . Parent=GSCOCT00012432001 | |
| 108 chr1 manual_curation exon 102873 103123 . - . Parent=GSCOCT00012432001 | |
| 109 chr1 manual_curation exon 100963 101145 . - . Parent=GSCOCT00012432001 | |
| 110 chr1 manual_curation exon 100701 100860 . - . Parent=GSCOCT00012432001 | |
| 111 chr1 manual_curation exon 100334 100464 . - . Parent=GSCOCT00012432001 | |
| 112 chr1 manual_curation exon 100066 100180 . - . Parent=GSCOCT00012432001 | |
| 113 chr1 manual_curation exon 98997 99978 . - . Parent=GSCOCT00012432001 | |
| 114 chr1 manual_curation exon 98770 98880 . - . Parent=GSCOCT00012432001 | |
| 115 chr1 manual_curation exon 98348 98427 . - . Parent=GSCOCT00012432001 | |
| 116 chr1 manual_curation exon 97615 97666 . - . Parent=GSCOCT00012432001 | |
| 117 chr1 manual_curation exon 97071 97171 . - . Parent=GSCOCT00012432001 | |
| 118 chr1 manual_curation exon 96455 96617 . - . Parent=GSCOCT00012432001 | |
| 119 chr1 manual_curation exon 95323 95596 . - . Parent=GSCOCT00012432001 | |
| 120 chr1 manual_curation exon 95058 95208 . - . Parent=GSCOCT00012432001 | |
| 121 chr1 manual_curation exon 94808 94919 . - . Parent=GSCOCT00012432001 | |
| 122 chr1 manual_curation exon 94543 94708 . - . Parent=GSCOCT00012432001 | |
| 123 chr1 manual_curation exon 94361 94431 . - . Parent=GSCOCT00012432001 | |
| 124 chr1 manual_curation exon 94102 94193 . - . Parent=GSCOCT00012432001 | |
| 125 chr1 manual_curation exon 93813 93975 . - . Parent=GSCOCT00012432001 | |
| 126 chr1 manual_curation exon 93628 93699 . - . Parent=GSCOCT00012432001 | |
| 127 chr1 manual_curation exon 91853 92230 . - . Parent=GSCOCT00012432001 | |
| 128 chr1 manual_curation exon 91645 91760 . - . Parent=GSCOCT00012432001 | |
| 129 chr1 manual_curation exon 91200 91497 . - . Parent=GSCOCT00012432001 | |
| 130 chr1 manual_curation exon 90615 90934 . - . Parent=GSCOCT00012432001 | |
| 131 chr1 manual_curation exon 90065 90416 . - . Parent=GSCOCT00012432001 | |
| 132 chr1 manual_curation exon 89618 89905 . - . Parent=GSCOCT00012432001 | |
| 133 chr1 manual_curation exon 89391 89495 . - . Parent=GSCOCT00012432001 | |
| 134 chr1 manual_curation exon 89122 89250 . - . Parent=GSCOCT00012432001 | |
| 135 chr1 manual_curation exon 88510 88890 . - . Parent=GSCOCT00012432001 | |
| 136 chr1 manual_curation exon 88281 88418 . - . Parent=GSCOCT00012432001 | |
| 137 chr1 manual_curation exon 87910 88146 . - . Parent=GSCOCT00012432001 | |
| 138 chr1 manual_curation exon 87508 87813 . - . Parent=GSCOCT00012432001 | |
| 139 chr1 manual_curation CDS 105408 105526 . - 0 Parent=GSCOCT00012432001 | |
| 140 chr1 manual_curation CDS 102873 103123 . - 2 Parent=GSCOCT00012432001 | |
| 141 chr1 manual_curation CDS 100963 101145 . - 1 Parent=GSCOCT00012432001 | |
| 142 chr1 manual_curation CDS 100701 100860 . - 1 Parent=GSCOCT00012432001 | |
| 143 chr1 manual_curation CDS 100334 100464 . - 2 Parent=GSCOCT00012432001 | |
| 144 chr1 manual_curation CDS 100066 100180 . - 1 Parent=GSCOCT00012432001 | |
| 145 chr1 manual_curation CDS 98997 99978 . - 2 Parent=GSCOCT00012432001 | |
| 146 chr1 manual_curation CDS 98770 98880 . - 0 Parent=GSCOCT00012432001 | |
| 147 chr1 manual_curation CDS 98348 98427 . - 0 Parent=GSCOCT00012432001 | |
| 148 chr1 manual_curation CDS 97615 97666 . - 2 Parent=GSCOCT00012432001 | |
| 149 chr1 manual_curation CDS 97071 97171 . - 0 Parent=GSCOCT00012432001 | |
| 150 chr1 manual_curation CDS 96455 96617 . - 2 Parent=GSCOCT00012432001 | |
| 151 chr1 manual_curation CDS 95323 95596 . - 0 Parent=GSCOCT00012432001 | |
| 152 chr1 manual_curation CDS 95058 95208 . - 1 Parent=GSCOCT00012432001 | |
| 153 chr1 manual_curation CDS 94808 94919 . - 2 Parent=GSCOCT00012432001 | |
| 154 chr1 manual_curation CDS 94543 94708 . - 0 Parent=GSCOCT00012432001 | |
| 155 chr1 manual_curation CDS 94361 94431 . - 1 Parent=GSCOCT00012432001 | |
| 156 chr1 manual_curation CDS 94102 94193 . - 0 Parent=GSCOCT00012432001 | |
| 157 chr1 manual_curation CDS 93813 93975 . - 2 Parent=GSCOCT00012432001 | |
| 158 chr1 manual_curation CDS 93628 93699 . - 0 Parent=GSCOCT00012432001 | |
| 159 chr1 manual_curation CDS 91853 92230 . - 0 Parent=GSCOCT00012432001 | |
| 160 chr1 manual_curation CDS 91645 91760 . - 0 Parent=GSCOCT00012432001 | |
| 161 chr1 manual_curation CDS 91200 91497 . - 2 Parent=GSCOCT00012432001 | |
| 162 chr1 manual_curation CDS 90615 90934 . - 0 Parent=GSCOCT00012432001 | |
| 163 chr1 manual_curation CDS 90065 90416 . - 2 Parent=GSCOCT00012432001 | |
| 164 chr1 manual_curation CDS 89618 89905 . - 0 Parent=GSCOCT00012432001 | |
| 165 chr1 manual_curation CDS 89391 89495 . - 0 Parent=GSCOCT00012432001 | |
| 166 chr1 manual_curation CDS 89122 89250 . - 0 Parent=GSCOCT00012432001 | |
| 167 chr1 manual_curation CDS 88510 88890 . - 0 Parent=GSCOCT00012432001 | |
| 168 chr1 manual_curation CDS 88281 88418 . - 0 Parent=GSCOCT00012432001 | |
| 169 chr1 manual_curation CDS 87910 88146 . - 0 Parent=GSCOCT00012432001 | |
| 170 chr1 manual_curation CDS 87508 87813 . - 0 Parent=GSCOCT00012432001 | |
| 171 chr1 manual_curation gene 109059 113429 . - . ID=GSCOCG00012431001;Name=Cc01_g00080 | |
| 172 chr1 manual_curation mRNA 109059 113429 . - . ID=GSCOCT00012431001;Parent=GSCOCG00012431001;Name=Cc01_g00080 | |
| 173 chr1 manual_curation polypeptide 110077 112993 . - . ID=GSCOCP00012431001;Dbxref=InterPro:IPR004314,PFAM:PF03080,TAIR:AT1G55360.1,TAIR:AT3G13510.1,TAIR:AT5G56530.1,TrEMBL:A5BPH6,TrEMBL:I1K482,TrEMBL:I1KSP0;Derives_from=GSCOCT00012431001;Name=Cc01_g00080;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of Unknown Function (DUF239),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012431001~ Protein of Unknown Function (DUF239)~ unknown_gene~ complete;original_location=join(279689..279928%2C280579..280926%2C281117..281281%2C281441..281494%2C281600..281746%2C282228..282605);owner=coffea | |
| 174 chr1 manual_curation exon 112754 113429 . - . Parent=GSCOCT00012431001 | |
| 175 chr1 manual_curation exon 111756 112103 . - . Parent=GSCOCT00012431001 | |
| 176 chr1 manual_curation exon 111401 111565 . - . Parent=GSCOCT00012431001 | |
| 177 chr1 manual_curation exon 111188 111241 . - . Parent=GSCOCT00012431001 | |
| 178 chr1 manual_curation exon 110936 111082 . - . Parent=GSCOCT00012431001 | |
| 179 chr1 manual_curation exon 109059 110454 . - . Parent=GSCOCT00012431001 | |
| 180 chr1 manual_curation CDS 112754 112993 . - 0 Parent=GSCOCT00012431001 | |
| 181 chr1 manual_curation CDS 111756 112103 . - 0 Parent=GSCOCT00012431001 | |
| 182 chr1 manual_curation CDS 111401 111565 . - 0 Parent=GSCOCT00012431001 | |
| 183 chr1 manual_curation CDS 111188 111241 . - 0 Parent=GSCOCT00012431001 | |
| 184 chr1 manual_curation CDS 110936 111082 . - 0 Parent=GSCOCT00012431001 | |
| 185 chr1 manual_curation CDS 110077 110454 . - 0 Parent=GSCOCT00012431001 | |
| 186 chr1 manual_curation gene 127970 128260 . + . ID=GSCOCG00012429001;Name=Cc01_g00090 | |
| 187 chr1 manual_curation mRNA 127970 128260 . + . ID=GSCOCT00012429001;Parent=GSCOCG00012429001;Name=Cc01_g00090 | |
| 188 chr1 manual_curation polypeptide 127970 128260 . + . ID=GSCOCP00012429001;Derives_from=GSCOCT00012429001;Name=Cc01_g00090;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012429001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(264422..264712);owner=coffea | |
| 189 chr1 manual_curation exon 127970 128260 . + . Parent=GSCOCT00012429001 | |
| 190 chr1 manual_curation CDS 127970 128260 . + 0 Parent=GSCOCT00012429001 | |
| 191 chr1 manual_curation gene 133387 135269 . + . ID=GSCOCG00012426001;Name=Cc01_g00100 | |
| 192 chr1 manual_curation mRNA 133387 135269 . + . ID=GSCOCT00012426001;Parent=GSCOCG00012426001;Name=Cc01_g00100 | |
| 193 chr1 manual_curation polypeptide 133821 135269 . + . ID=GSCOCP00012426001;Dbxref=InterPro:IPR019333,PFAM:PF10189,SwissProt:Q55EZ4,SwissProt:Q5RE70,SwissProt:Q7TPD0,TAIR:AT4G14590.1,TrEMBL:B9GG97,TrEMBL:B9SM21,TrEMBL:G7JKH2;Derives_from=GSCOCT00012426001;Name=Cc01_g00100;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Integrator complex subunit 3,CC_functional_completeness:fragment,CC_gene:Ints3,CC_gene:INTS3,CC_gene:ints3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012426001~ Putative Integrator complex subunit 3~ Ints3~ fragment;original_location=complement(257413..258861);owner=coffea | |
| 194 chr1 manual_curation exon 133387 135269 . + . Parent=GSCOCT00012426001 | |
| 195 chr1 manual_curation CDS 133821 135269 . + 0 Parent=GSCOCT00012426001 | |
| 196 chr1 manual_curation gene 135870 136467 . + . ID=GSCOCG00012425001;Name=Cc01_g00110 | |
| 197 chr1 manual_curation mRNA 135870 136467 . + . ID=GSCOCT00012425001;Parent=GSCOCG00012425001;Name=Cc01_g00110 | |
| 198 chr1 manual_curation polypeptide 135870 136467 . + . ID=GSCOCP00012425001;Derives_from=GSCOCT00012425001;Name=Cc01_g00110;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012425001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(256710..256812%2C256215..256249));owner=coffea | |
| 199 chr1 manual_curation exon 136433 136467 . + . Parent=GSCOCT00012425001 | |
| 200 chr1 manual_curation exon 135870 135972 . + . Parent=GSCOCT00012425001 | |
| 201 chr1 manual_curation CDS 136433 136467 . + 1 Parent=GSCOCT00012425001 | |
| 202 chr1 manual_curation CDS 135870 135972 . + 0 Parent=GSCOCT00012425001 | |
| 203 chr1 manual_curation gene 136527 140715 . + . ID=GSCOCG00012424001;Name=Cc01_g00120 | |
| 204 chr1 manual_curation mRNA 136527 140715 . + . ID=GSCOCT00012424001;Parent=GSCOCG00012424001;Name=Cc01_g00120 | |
| 205 chr1 manual_curation polypeptide 136527 138644 . + . ID=GSCOCP00012424001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q56XI1,SwissProt:Q9FXB9,SwissProt:Q9SY02,TAIR:AT1G09410.1,TAIR:AT1G56690.1,TAIR:AT4G02750.1,TIGRFAMs:TIGR00756,TrEMBL:B9I6N6,TrEMBL:F6I4V5,TrEMBL:I1L6X3;Derives_from=GSCOCT00012424001;Name=Cc01_g00120;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At1g56690%2C mitochondrial,CC_functional_completeness:complete,CC_gene:PCMP-H69,CC_gene:PCMP-H18,CC_gene:PCMP-H24;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012424001~ Pentatricopeptide repeat-containing protein At1g56690%2C mitochondrial~ PCMP-H69~ complete;original_location=complement(254038..256155);owner=coffea | |
| 206 chr1 manual_curation exon 140476 140715 . + . Parent=GSCOCT00012424001 | |
| 207 chr1 manual_curation exon 140148 140210 . + . Parent=GSCOCT00012424001 | |
| 208 chr1 manual_curation exon 139790 139933 . + . Parent=GSCOCT00012424001 | |
| 209 chr1 manual_curation exon 136527 139057 . + . Parent=GSCOCT00012424001 | |
| 210 chr1 manual_curation CDS 136527 138644 . + 0 Parent=GSCOCT00012424001 | |
| 211 chr1 manual_curation gene 144043 144887 . - . ID=GSCOCG00012422001;Name=Cc01_g00130 | |
| 212 chr1 manual_curation mRNA 144043 144887 . - . ID=GSCOCT00012422001;Parent=GSCOCG00012422001;Name=Cc01_g00130 | |
| 213 chr1 manual_curation polypeptide 144186 144650 . - . ID=GSCOCP00012422001;Dbxref=TAIR:AT1G55365.1,TAIR:AT5G56520.1,TrEMBL:B9GLC9,TrEMBL:B9GXY5,TrEMBL:B9SBP8;Derives_from=GSCOCT00012422001;Name=Cc01_g00130;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012422001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=248032..248496;owner=coffea | |
| 214 chr1 manual_curation exon 144043 144887 . - . Parent=GSCOCT00012422001 | |
| 215 chr1 manual_curation CDS 144186 144650 . - 0 Parent=GSCOCT00012422001 | |
| 216 chr1 manual_curation gene 147799 165157 . + . ID=GSCOCG00012421001;Name=Cc01_g00140 | |
| 217 chr1 manual_curation mRNA 147799 165157 . + . ID=GSCOCT00012421001;Parent=GSCOCG00012421001;Name=Cc01_g00140 | |
| 218 chr1 manual_curation polypeptide 147799 164628 . + . ID=GSCOCP00012421001;Dbxref=GENE3D:G3DSA:2.40.50.140,HAMAP:MF_00252,InterPro:IPR002313,InterPro:IPR004364,InterPro:IPR004365,InterPro:IPR006195,InterPro:IPR012340,InterPro:IPR016027,InterPro:IPR018149,InterPro:IPR018150,PANTHER:PTHR22594,PANTHER:PTHR22594:SF4,PFAM:PF00152,PFAM:PF01336,PRINTS:PR00982,PROFILE:PS50862,SUPERFAMILY:SSF50249,SwissProt:P73443,SwissProt:Q3M8C8,SwissProt:Q8DMA9,TAIR:AT3G11710.1,TAIR:AT3G13490.1,TAIR:AT4G26870.1,TIGRFAMs:TIGR00499,TrEMBL:A5BPH5,TrEMBL:D7SLL4,TrEMBL:I1JMN9;Derives_from=GSCOCT00012421001;Name=Cc01_g00140;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,GO:0004812,GO:0004824,GO:0005524,GO:0005737,GO:0006412,GO:0006418,GO:0006430,CC_EC_number:6.1.1.6,PRODUCT:Lysine--tRNA ligase,CC_functional_completeness:modules,CC_gene:lysS;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012421001~ Lysine--tRNA ligase~ lysS~ modules;original_location=complement(join(244439..244883%2C243737..243750%2C243322..243540%2C242565..242676%2C241358..241466%2C240036..240093%2C235565..235633%2C232465..232572%2C231863..231955%2C231386..231490%2C230835..231041%2C230543..230637%2C229973..230063%2C229145..229321%2C228054..228146));owner=coffea | |
| 219 chr1 manual_curation exon 164536 165157 . + . Parent=GSCOCT00012421001 | |
| 220 chr1 manual_curation exon 163361 163537 . + . Parent=GSCOCT00012421001 | |
| 221 chr1 manual_curation exon 162619 162709 . + . Parent=GSCOCT00012421001 | |
| 222 chr1 manual_curation exon 162045 162139 . + . Parent=GSCOCT00012421001 | |
| 223 chr1 manual_curation exon 161641 161847 . + . Parent=GSCOCT00012421001 | |
| 224 chr1 manual_curation exon 161192 161296 . + . Parent=GSCOCT00012421001 | |
| 225 chr1 manual_curation exon 160727 160819 . + . Parent=GSCOCT00012421001 | |
| 226 chr1 manual_curation exon 160110 160217 . + . Parent=GSCOCT00012421001 | |
| 227 chr1 manual_curation exon 157049 157117 . + . Parent=GSCOCT00012421001 | |
| 228 chr1 manual_curation exon 152589 152646 . + . Parent=GSCOCT00012421001 | |
| 229 chr1 manual_curation exon 151216 151324 . + . Parent=GSCOCT00012421001 | |
| 230 chr1 manual_curation exon 150006 150117 . + . Parent=GSCOCT00012421001 | |
| 231 chr1 manual_curation exon 149142 149360 . + . Parent=GSCOCT00012421001 | |
| 232 chr1 manual_curation exon 148932 148945 . + . Parent=GSCOCT00012421001 | |
| 233 chr1 manual_curation exon 147799 148243 . + . Parent=GSCOCT00012421001 | |
| 234 chr1 manual_curation CDS 164536 164628 . + 0 Parent=GSCOCT00012421001 | |
| 235 chr1 manual_curation CDS 163361 163537 . + 0 Parent=GSCOCT00012421001 | |
| 236 chr1 manual_curation CDS 162619 162709 . + 2 Parent=GSCOCT00012421001 | |
| 237 chr1 manual_curation CDS 162045 162139 . + 0 Parent=GSCOCT00012421001 | |
| 238 chr1 manual_curation CDS 161641 161847 . + 0 Parent=GSCOCT00012421001 | |
| 239 chr1 manual_curation CDS 161192 161296 . + 0 Parent=GSCOCT00012421001 | |
| 240 chr1 manual_curation CDS 160727 160819 . + 0 Parent=GSCOCT00012421001 | |
| 241 chr1 manual_curation CDS 160110 160217 . + 0 Parent=GSCOCT00012421001 | |
| 242 chr1 manual_curation CDS 157049 157117 . + 0 Parent=GSCOCT00012421001 | |
| 243 chr1 manual_curation CDS 152589 152646 . + 2 Parent=GSCOCT00012421001 | |
| 244 chr1 manual_curation CDS 151216 151324 . + 1 Parent=GSCOCT00012421001 | |
| 245 chr1 manual_curation CDS 150006 150117 . + 0 Parent=GSCOCT00012421001 | |
| 246 chr1 manual_curation CDS 149142 149360 . + 0 Parent=GSCOCT00012421001 | |
| 247 chr1 manual_curation CDS 148932 148945 . + 1 Parent=GSCOCT00012421001 | |
| 248 chr1 manual_curation CDS 147799 148243 . + 0 Parent=GSCOCT00012421001 | |
| 249 chr1 manual_curation gene 168361 170725 . + . ID=GSCOCG00012419001;Name=Cc01_g00150 | |
| 250 chr1 manual_curation mRNA 168361 170725 . + . ID=GSCOCT00012419001;Parent=GSCOCG00012419001;Name=Cc01_g00150 | |
| 251 chr1 manual_curation polypeptide 168409 170725 . + . ID=GSCOCP00012419001;Dbxref=TAIR:AT3G13480.1,TrEMBL:B9GLC8,TrEMBL:B9NFL4,TrEMBL:D7SLL6;Derives_from=GSCOCT00012419001;Name=Cc01_g00150;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012419001~ Putative unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55475.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(223900..224273%2C221957..222017));owner=coffea | |
| 252 chr1 manual_curation exon 170665 170725 . + . Parent=GSCOCT00012419001 | |
| 253 chr1 manual_curation exon 168361 168782 . + . Parent=GSCOCT00012419001 | |
| 254 chr1 manual_curation CDS 170665 170725 . + 2 Parent=GSCOCT00012419001 | |
| 255 chr1 manual_curation CDS 168409 168782 . + 0 Parent=GSCOCT00012419001 | |
| 256 chr1 manual_curation gene 170781 174622 . - . ID=GSCOCG00012418001;Name=Cc01_g00160 | |
| 257 chr1 manual_curation mRNA 170781 174622 . - . ID=GSCOCT00012418001;Parent=GSCOCG00012418001;Name=Cc01_g00160 | |
| 258 chr1 manual_curation polypeptide 172130 174622 . - . ID=GSCOCP00012418001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SMART:SM00369,SwissProt:Q8VZG8,SwissProt:Q9C9H7,SwissProt:Q9FL28,TAIR:AT1G71400.1,TAIR:AT4G04220.1,TAIR:AT4G08850.1,TrEMBL:A5AKU2,TrEMBL:B9GLC7,TrEMBL:B9SBP1;Derives_from=GSCOCT00012418001;Name=Cc01_g00160;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:3.1.3.16,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At4g08850,CC_functional_completeness:fragment,CC_gene:At4g08850,CC_gene:RLP12,CC_gene:FLS2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012418001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At4g08850~ At4g08850~ fragment;original_location=218060..220552;owner=coffea | |
| 259 chr1 manual_curation exon 170781 174622 . - . Parent=GSCOCT00012418001 | |
| 260 chr1 manual_curation CDS 172130 174622 . - 0 Parent=GSCOCT00012418001 | |
| 261 chr1 manual_curation gene 180581 183123 . + . ID=GSCOCG00012417001;Name=Cc01_g00170 | |
| 262 chr1 manual_curation mRNA 180581 183123 . + . ID=GSCOCT00012417001;Parent=GSCOCG00012417001;Name=Cc01_g00170 | |
| 263 chr1 manual_curation polypeptide 180581 183123 . + . ID=GSCOCP00012417001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:Q50EK0,SwissProt:Q50EK1,SwissProt:Q8W4T9,TAIR:AT2G29090.1,TAIR:AT2G42850.1,TAIR:AT5G36110.1,TrEMBL:B8Y882,TrEMBL:Q0NZP1,TrEMBL:Q2HYU7;Derives_from=GSCOCT00012417001;Name=Cc01_g00170;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.77,PRODUCT:Putative Cytochrome P450,CC_functional_completeness:complete,CC_gene:CYP716B2,CC_gene:CYP716B1,CC_gene:CYP725A2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012417001~ Putative Cytochrome P450~ CYP716B2~ complete;original_location=complement(join(211810..212101%2C210384..210932%2C210075..210277%2C209559..209876));owner=coffea | |
| 264 chr1 manual_curation exon 182806 183123 . + . Parent=GSCOCT00012417001 | |
| 265 chr1 manual_curation exon 182405 182607 . + . Parent=GSCOCT00012417001 | |
| 266 chr1 manual_curation exon 181750 182298 . + . Parent=GSCOCT00012417001 | |
| 267 chr1 manual_curation exon 180581 180872 . + . Parent=GSCOCT00012417001 | |
| 268 chr1 manual_curation CDS 182806 183123 . + 0 Parent=GSCOCT00012417001 | |
| 269 chr1 manual_curation CDS 182405 182607 . + 1 Parent=GSCOCT00012417001 | |
| 270 chr1 manual_curation CDS 181750 182298 . + 1 Parent=GSCOCT00012417001 | |
| 271 chr1 manual_curation CDS 180581 180872 . + 0 Parent=GSCOCT00012417001 | |
| 272 chr1 manual_curation gene 188034 190837 . + . ID=GSCOCG00012416001;Name=Cc01_g00180 | |
| 273 chr1 manual_curation mRNA 188034 190837 . + . ID=GSCOCT00012416001;Parent=GSCOCG00012416001;Name=Cc01_g00180 | |
| 274 chr1 manual_curation polypeptide 188610 190662 . + . ID=GSCOCP00012416001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:Q50EK0,SwissProt:Q50EK1,SwissProt:Q8W4T9,TAIR:AT2G42850.1,TAIR:AT5G36110.1,TAIR:AT5G45340.1,TrEMBL:B8Y882,TrEMBL:Q0NZP1,TrEMBL:Q2HYU7;Derives_from=GSCOCT00012416001;Name=Cc01_g00180;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.77,PRODUCT:Cytochrome P450 716B2,CC_functional_completeness:fragment,CC_gene:CYP716B2,CC_gene:CYP716B1,CC_gene:CYP725A2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012416001~ Cytochrome P450 716B2~ CYP716B2~ fragment;original_location=complement(join(203826..204072%2C202969..203424%2C202505..202692%2C202020..202319));owner=coffea | |
| 275 chr1 manual_curation exon 190363 190837 . + . Parent=GSCOCT00012416001 | |
| 276 chr1 manual_curation exon 189990 190177 . + . Parent=GSCOCT00012416001 | |
| 277 chr1 manual_curation exon 189258 189713 . + . Parent=GSCOCT00012416001 | |
| 278 chr1 manual_curation exon 188034 188856 . + . Parent=GSCOCT00012416001 | |
| 279 chr1 manual_curation CDS 190363 190662 . + 0 Parent=GSCOCT00012416001 | |
| 280 chr1 manual_curation CDS 189990 190177 . + 1 Parent=GSCOCT00012416001 | |
| 281 chr1 manual_curation CDS 189258 189713 . + 1 Parent=GSCOCT00012416001 | |
| 282 chr1 manual_curation CDS 188610 188856 . + 0 Parent=GSCOCT00012416001 | |
| 283 chr1 manual_curation gene 190985 194343 . - . ID=GSCOCG00012415001;Name=Cc01_g00190 | |
| 284 chr1 manual_curation mRNA 190985 194343 . - . ID=GSCOCT00012415001;Parent=GSCOCG00012415001;Name=Cc01_g00190 | |
| 285 chr1 manual_curation polypeptide 191298 193965 . - . ID=GSCOCP00012415001;Dbxref=GENE3D:G3DSA:1.25.40.10,InterPro:IPR001478,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR019734,PROFILE:PS50005,PROFILE:PS50106,PROFILE:PS50293,SUPERFAMILY:SSF50156,TAIR:AT1G55480.1,TrEMBL:B7FKN6,TrEMBL:B9SBN8,TrEMBL:G7L8R3;Derives_from=GSCOCT00012415001;Name=Cc01_g00190;Ontology_term=CC_evidence_code:ISS,GO:0005488,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:protein containing PDZ domain%2C a K-box domain%2C and a TPR region,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012415001~ protein containing PDZ domain%2C a K-box domain%2C and a TPR region~ unknown_gene~ complete;original_location=join(198717..198948%2C198994..199159%2C199507..199613%2C199828..199922%2C200004..200080%2C200712..200832%2C201097..201156%2C201241..201384);owner=coffea | |
| 286 chr1 manual_curation exon 193734 194343 . - . Parent=GSCOCT00012415001 | |
| 287 chr1 manual_curation exon 193523 193688 . - . Parent=GSCOCT00012415001 | |
| 288 chr1 manual_curation exon 193069 193175 . - . Parent=GSCOCT00012415001 | |
| 289 chr1 manual_curation exon 192760 192854 . - . Parent=GSCOCT00012415001 | |
| 290 chr1 manual_curation exon 192602 192678 . - . Parent=GSCOCT00012415001 | |
| 291 chr1 manual_curation exon 191850 191970 . - . Parent=GSCOCT00012415001 | |
| 292 chr1 manual_curation exon 191526 191585 . - . Parent=GSCOCT00012415001 | |
| 293 chr1 manual_curation exon 190985 191441 . - . Parent=GSCOCT00012415001 | |
| 294 chr1 manual_curation CDS 193734 193965 . - 0 Parent=GSCOCT00012415001 | |
| 295 chr1 manual_curation CDS 193523 193688 . - 1 Parent=GSCOCT00012415001 | |
| 296 chr1 manual_curation CDS 193069 193175 . - 2 Parent=GSCOCT00012415001 | |
| 297 chr1 manual_curation CDS 192760 192854 . - 1 Parent=GSCOCT00012415001 | |
| 298 chr1 manual_curation CDS 192602 192678 . - 0 Parent=GSCOCT00012415001 | |
| 299 chr1 manual_curation CDS 191850 191970 . - 2 Parent=GSCOCT00012415001 | |
| 300 chr1 manual_curation CDS 191526 191585 . - 0 Parent=GSCOCT00012415001 | |
| 301 chr1 manual_curation CDS 191298 191441 . - 0 Parent=GSCOCT00012415001 | |
| 302 chr1 manual_curation gene 195322 200129 . - . ID=GSCOCG00012414001;Name=Cc01_g00200 | |
| 303 chr1 manual_curation mRNA 195322 200129 . - . ID=GSCOCT00012414001;Parent=GSCOCG00012414001;Name=Cc01_g00200 | |
| 304 chr1 manual_curation polypeptide 195621 199258 . - . ID=GSCOCP00012414001;Dbxref=HAMAP:MF_00600,InterPro:IPR001844,InterPro:IPR002423,InterPro:IPR018370,PANTHER:PTHR11353,PFAM:PF00118,PRINTS:PR00298,PROSITE:PS00296,SUPERFAMILY:SSF48592,SwissProt:P08927,SwissProt:P21240,SwissProt:Q9LJE4,TAIR:AT1G55490.1,TAIR:AT3G13470.1,TAIR:AT5G56500.1,TIGRFAMs:TIGR02348,TrEMBL:B9GXY0,TrEMBL:B9SBN5,TrEMBL:P93570;Derives_from=GSCOCT00012414001;Name=Cc01_g00200;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0005524,GO:0005737,GO:0006457,GO:0042026,GO:0044267,CC_EC_number:missing_EC_number,PRODUCT:RuBisCO large subunit-binding protein subunit beta%2C chloroplastic,CC_functional_completeness:complete,CC_gene:CPN60B2,CC_gene:CPN60B1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012414001~ RuBisCO large subunit-binding protein subunit beta%2C chloroplastic~ CPN60B2~ complete;original_location=join(193424..193666%2C193764..193889%2C194194..194331%2C194438..194533%2C194675..194917%2C195015..195249%2C195357..195526%2C195613..195690%2C195853..195924%2C196029..196133%2C196290..196382%2C196567..196659%2C196802..196925%2C197048..197061);owner=coffea | |
| 305 chr1 manual_curation exon 199939 200129 . - . Parent=GSCOCT00012414001 | |
| 306 chr1 manual_curation exon 199016 199273 . - . Parent=GSCOCT00012414001 | |
| 307 chr1 manual_curation exon 198793 198918 . - . Parent=GSCOCT00012414001 | |
| 308 chr1 manual_curation exon 198351 198488 . - . Parent=GSCOCT00012414001 | |
| 309 chr1 manual_curation exon 198149 198244 . - . Parent=GSCOCT00012414001 | |
| 310 chr1 manual_curation exon 197765 198007 . - . Parent=GSCOCT00012414001 | |
| 311 chr1 manual_curation exon 197433 197667 . - . Parent=GSCOCT00012414001 | |
| 312 chr1 manual_curation exon 197156 197325 . - . Parent=GSCOCT00012414001 | |
| 313 chr1 manual_curation exon 196992 197069 . - . Parent=GSCOCT00012414001 | |
| 314 chr1 manual_curation exon 196758 196829 . - . Parent=GSCOCT00012414001 | |
| 315 chr1 manual_curation exon 196549 196653 . - . Parent=GSCOCT00012414001 | |
| 316 chr1 manual_curation exon 196300 196392 . - . Parent=GSCOCT00012414001 | |
| 317 chr1 manual_curation exon 196023 196115 . - . Parent=GSCOCT00012414001 | |
| 318 chr1 manual_curation exon 195757 195880 . - . Parent=GSCOCT00012414001 | |
| 319 chr1 manual_curation exon 195322 195634 . - . Parent=GSCOCT00012414001 | |
| 320 chr1 manual_curation CDS 199016 199258 . - 0 Parent=GSCOCT00012414001 | |
| 321 chr1 manual_curation CDS 198793 198918 . - 0 Parent=GSCOCT00012414001 | |
| 322 chr1 manual_curation CDS 198351 198488 . - 0 Parent=GSCOCT00012414001 | |
| 323 chr1 manual_curation CDS 198149 198244 . - 0 Parent=GSCOCT00012414001 | |
| 324 chr1 manual_curation CDS 197765 198007 . - 0 Parent=GSCOCT00012414001 | |
| 325 chr1 manual_curation CDS 197433 197667 . - 0 Parent=GSCOCT00012414001 | |
| 326 chr1 manual_curation CDS 197156 197325 . - 1 Parent=GSCOCT00012414001 | |
| 327 chr1 manual_curation CDS 196992 197069 . - 0 Parent=GSCOCT00012414001 | |
| 328 chr1 manual_curation CDS 196758 196829 . - 0 Parent=GSCOCT00012414001 | |
| 329 chr1 manual_curation CDS 196549 196653 . - 0 Parent=GSCOCT00012414001 | |
| 330 chr1 manual_curation CDS 196300 196392 . - 0 Parent=GSCOCT00012414001 | |
| 331 chr1 manual_curation CDS 196023 196115 . - 0 Parent=GSCOCT00012414001 | |
| 332 chr1 manual_curation CDS 195757 195880 . - 0 Parent=GSCOCT00012414001 | |
| 333 chr1 manual_curation CDS 195621 195634 . - 1 Parent=GSCOCT00012414001 | |
| 334 chr1 manual_curation gene 201413 202782 . + . ID=GSCOCG00012413001;Name=Cc01_g00210 | |
| 335 chr1 manual_curation mRNA 201413 202782 . + . ID=GSCOCT00012413001;Parent=GSCOCG00012413001;Name=Cc01_g00210 | |
| 336 chr1 manual_curation polypeptide 201413 202782 . + . ID=GSCOCP00012413001;Dbxref=SwissProt:O82150,SwissProt:Q39444,SwissProt:Q9FH02,TAIR:AT1G50250.1,TAIR:AT2G30950.1,TAIR:AT5G42270.1,TrEMBL:A1KXM7,TrEMBL:A5B2F0,TrEMBL:B9R8K6;Derives_from=GSCOCT00012413001;Name=Cc01_g00210;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:ATP-dependent zinc metalloprotease FTSH%2C chloroplastic (Fragment),CC_functional_completeness:fragment,CC_gene:FTSH,CC_gene:FTSH5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012413001~ ATP-dependent zinc metalloprotease FTSH%2C chloroplastic (Fragment)~ FTSH~ fragment;original_location=complement(join(191255..191269%2C189900..190586));owner=coffea | |
| 337 chr1 manual_curation exon 202096 202782 . + . Parent=GSCOCT00012413001 | |
| 338 chr1 manual_curation exon 201413 201427 . + . Parent=GSCOCT00012413001 | |
| 339 chr1 manual_curation CDS 202096 202782 . + 0 Parent=GSCOCT00012413001 | |
| 340 chr1 manual_curation CDS 201413 201427 . + 0 Parent=GSCOCT00012413001 | |
| 341 chr1 manual_curation gene 206067 210940 . - . ID=GSCOCG00012412001;Name=Cc01_g00220 | |
| 342 chr1 manual_curation mRNA 206067 210940 . - . ID=GSCOCT00012412001;Parent=GSCOCG00012412001;Name=Cc01_g00220 | |
| 343 chr1 manual_curation polypeptide 206363 210342 . - . ID=GSCOCP00012412001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR020635,PFAM:PF07714,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q8GXZ3,SwissProt:Q9FM85,SwissProt:Q9LFP7,TAIR:AT2G05940.1,TAIR:AT5G01020.1,TAIR:AT5G56460.1,TrEMBL:A5C1Z1,TrEMBL:B9SBN3,TrEMBL:F6GUP0;Derives_from=GSCOCT00012412001;Name=Cc01_g00220;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Probable receptor-like protein kinase At5g56460,CC_functional_completeness:complete,CC_gene:At5g56460,CC_gene:At5g01020,CC_gene:At5g15080;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012412001~ Probable receptor-like protein kinase At5g56460~ At5g56460~ complete;original_location=join(182340..182412%2C183414..183718%2C183813..183948%2C184835..184971%2C185551..185674%2C185919..186319);owner=coffea | |
| 344 chr1 manual_curation exon 210270 210940 . - . Parent=GSCOCT00012412001 | |
| 345 chr1 manual_curation exon 208964 209268 . - . Parent=GSCOCT00012412001 | |
| 346 chr1 manual_curation exon 208734 208869 . - . Parent=GSCOCT00012412001 | |
| 347 chr1 manual_curation exon 207711 207847 . - . Parent=GSCOCT00012412001 | |
| 348 chr1 manual_curation exon 207008 207131 . - . Parent=GSCOCT00012412001 | |
| 349 chr1 manual_curation exon 206067 206763 . - . Parent=GSCOCT00012412001 | |
| 350 chr1 manual_curation CDS 210270 210342 . - 0 Parent=GSCOCT00012412001 | |
| 351 chr1 manual_curation CDS 208964 209268 . - 1 Parent=GSCOCT00012412001 | |
| 352 chr1 manual_curation CDS 208734 208869 . - 0 Parent=GSCOCT00012412001 | |
| 353 chr1 manual_curation CDS 207711 207847 . - 1 Parent=GSCOCT00012412001 | |
| 354 chr1 manual_curation CDS 207008 207131 . - 0 Parent=GSCOCT00012412001 | |
| 355 chr1 manual_curation CDS 206363 206763 . - 1 Parent=GSCOCT00012412001 | |
| 356 chr1 manual_curation gene 215279 220399 . + . ID=GSCOCG00012411001;Name=Cc01_g00230 | |
| 357 chr1 manual_curation mRNA 215279 220399 . + . ID=GSCOCT00012411001;Parent=GSCOCG00012411001;Name=Cc01_g00230 | |
| 358 chr1 manual_curation polypeptide 215279 220399 . + . ID=GSCOCP00012411001;Dbxref=GENE3D:G3DSA:3.40.50.200,InterPro:IPR000209,InterPro:IPR009020,InterPro:IPR010259,InterPro:IPR015500,InterPro:IPR022398,PANTHER:PTHR10795,PFAM:PF00082,PFAM:PF05922,PRINTS:PR00723,PROSITE:PS00137,PROSITE:PS00138,SUPERFAMILY:SSF52743,SUPERFAMILY:SSF54897,SwissProt:O64495,SwissProt:O65351,SwissProt:Q39547,TAIR:AT4G10520.1,TAIR:AT4G10540.1,TAIR:AT4G26330.1,TrEMBL:A5C1Z0,TrEMBL:B9GLC0,TrEMBL:D7SLN2;Derives_from=GSCOCT00012411001;Name=Cc01_g00230;Ontology_term=CC_evidence_code:ISS,GO:0004252,GO:0006508,GO:0042802,GO:0043086,CC_EC_number:3.4.21.25,PRODUCT:Putative Subtilisin-like protease,CC_functional_completeness:complete,CC_gene:ARA12,CC_gene:SDD1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012411001~ Putative Subtilisin-like protease~ ARA12~ complete;original_location=complement(join(177323..177403%2C177140..177231%2C176920..177017%2C176648..176815%2C176573..176611%2C175362..176035%2C174146..174213%2C173691..173939%2C173388..173505%2C173073..173286%2C172711..172926%2C172283..172656));owner=coffea | |
| 359 chr1 manual_curation exon 220026 220399 . + . Parent=GSCOCT00012411001 | |
| 360 chr1 manual_curation exon 219756 219971 . + . Parent=GSCOCT00012411001 | |
| 361 chr1 manual_curation exon 219396 219609 . + . Parent=GSCOCT00012411001 | |
| 362 chr1 manual_curation exon 219177 219294 . + . Parent=GSCOCT00012411001 | |
| 363 chr1 manual_curation exon 218743 218991 . + . Parent=GSCOCT00012411001 | |
| 364 chr1 manual_curation exon 218469 218536 . + . Parent=GSCOCT00012411001 | |
| 365 chr1 manual_curation exon 216647 217320 . + . Parent=GSCOCT00012411001 | |
| 366 chr1 manual_curation exon 216071 216109 . + . Parent=GSCOCT00012411001 | |
| 367 chr1 manual_curation exon 215867 216034 . + . Parent=GSCOCT00012411001 | |
| 368 chr1 manual_curation exon 215665 215762 . + . Parent=GSCOCT00012411001 | |
| 369 chr1 manual_curation exon 215451 215542 . + . Parent=GSCOCT00012411001 | |
| 370 chr1 manual_curation exon 215279 215359 . + . Parent=GSCOCT00012411001 | |
| 371 chr1 manual_curation CDS 220026 220399 . + 1 Parent=GSCOCT00012411001 | |
| 372 chr1 manual_curation CDS 219756 219971 . + 1 Parent=GSCOCT00012411001 | |
| 373 chr1 manual_curation CDS 219396 219609 . + 0 Parent=GSCOCT00012411001 | |
| 374 chr1 manual_curation CDS 219177 219294 . + 2 Parent=GSCOCT00012411001 | |
| 375 chr1 manual_curation CDS 218743 218991 . + 2 Parent=GSCOCT00012411001 | |
| 376 chr1 manual_curation CDS 218469 218536 . + 0 Parent=GSCOCT00012411001 | |
| 377 chr1 manual_curation CDS 216647 217320 . + 1 Parent=GSCOCT00012411001 | |
| 378 chr1 manual_curation CDS 216071 216109 . + 1 Parent=GSCOCT00012411001 | |
| 379 chr1 manual_curation CDS 215867 216034 . + 1 Parent=GSCOCT00012411001 | |
| 380 chr1 manual_curation CDS 215665 215762 . + 2 Parent=GSCOCT00012411001 | |
| 381 chr1 manual_curation CDS 215451 215542 . + 0 Parent=GSCOCT00012411001 | |
| 382 chr1 manual_curation CDS 215279 215359 . + 0 Parent=GSCOCT00012411001 | |
| 383 chr1 manual_curation gene 221243 227244 . + . ID=GSCOCG00012410001;Name=Cc01_g00240 | |
| 384 chr1 manual_curation mRNA 221243 227244 . + . ID=GSCOCT00012410001;Parent=GSCOCG00012410001;Name=Cc01_g00240 | |
| 385 chr1 manual_curation polypeptide 221591 226707 . + . ID=GSCOCP00012410001;Dbxref=GENE3D:G3DSA:3.40.50.920,InterPro:IPR005475,InterPro:IPR005476,InterPro:IPR009014,InterPro:IPR015941,PFAM:PF02779,PFAM:PF02780,SMART:SM00861,SUPERFAMILY:SSF52922,SwissProt:P21839,SwissProt:P21953,SwissProt:P35738,TAIR:AT1G55510.1,TAIR:AT3G13450.1,TAIR:AT5G50850.1,TrEMBL:C6TGA9,TrEMBL:D7SLN4,TrEMBL:I1JM18;Derives_from=GSCOCT00012410001;Name=Cc01_g00240;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,CC_EC_number:1.2.4.1,PRODUCT:2-oxoisovalerate dehydrogenase subunit beta%2C mitochondrial,CC_functional_completeness:complete,CC_gene:BCKDHB,CC_gene:Bckdhb;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012410001~ 2-oxoisovalerate dehydrogenase subunit beta%2C mitochondrial~ BCKDHB~ complete;original_location=complement(join(170805..171091%2C170254..170365%2C170031..170066%2C169846..169905%2C169712..169769%2C169543..169640%2C168281..168370%2C168114..168182%2C167950..168036%2C167590..167685%2C167425..167502%2C166095..166181%2C165975..166010));owner=coffea | |
| 386 chr1 manual_curation exon 226672 227244 . + . Parent=GSCOCT00012410001 | |
| 387 chr1 manual_curation exon 226501 226587 . + . Parent=GSCOCT00012410001 | |
| 388 chr1 manual_curation exon 225180 225257 . + . Parent=GSCOCT00012410001 | |
| 389 chr1 manual_curation exon 224997 225092 . + . Parent=GSCOCT00012410001 | |
| 390 chr1 manual_curation exon 224646 224732 . + . Parent=GSCOCT00012410001 | |
| 391 chr1 manual_curation exon 224500 224568 . + . Parent=GSCOCT00012410001 | |
| 392 chr1 manual_curation exon 224312 224401 . + . Parent=GSCOCT00012410001 | |
| 393 chr1 manual_curation exon 223042 223139 . + . Parent=GSCOCT00012410001 | |
| 394 chr1 manual_curation exon 222913 222970 . + . Parent=GSCOCT00012410001 | |
| 395 chr1 manual_curation exon 222777 222836 . + . Parent=GSCOCT00012410001 | |
| 396 chr1 manual_curation exon 222616 222651 . + . Parent=GSCOCT00012410001 | |
| 397 chr1 manual_curation exon 222317 222428 . + . Parent=GSCOCT00012410001 | |
| 398 chr1 manual_curation exon 221243 221877 . + . Parent=GSCOCT00012410001 | |
| 399 chr1 manual_curation CDS 226672 226707 . + 0 Parent=GSCOCT00012410001 | |
| 400 chr1 manual_curation CDS 226501 226587 . + 0 Parent=GSCOCT00012410001 | |
| 401 chr1 manual_curation CDS 225180 225257 . + 0 Parent=GSCOCT00012410001 | |
| 402 chr1 manual_curation CDS 224997 225092 . + 0 Parent=GSCOCT00012410001 | |
| 403 chr1 manual_curation CDS 224646 224732 . + 0 Parent=GSCOCT00012410001 | |
| 404 chr1 manual_curation CDS 224500 224568 . + 0 Parent=GSCOCT00012410001 | |
| 405 chr1 manual_curation CDS 224312 224401 . + 0 Parent=GSCOCT00012410001 | |
| 406 chr1 manual_curation CDS 223042 223139 . + 1 Parent=GSCOCT00012410001 | |
| 407 chr1 manual_curation CDS 222913 222970 . + 0 Parent=GSCOCT00012410001 | |
| 408 chr1 manual_curation CDS 222777 222836 . + 0 Parent=GSCOCT00012410001 | |
| 409 chr1 manual_curation CDS 222616 222651 . + 0 Parent=GSCOCT00012410001 | |
| 410 chr1 manual_curation CDS 222317 222428 . + 2 Parent=GSCOCT00012410001 | |
| 411 chr1 manual_curation CDS 221591 221877 . + 0 Parent=GSCOCT00012410001 | |
| 412 chr1 manual_curation gene 228213 232372 . - . ID=GSCOCG00012409001;Name=Cc01_g00250 | |
| 413 chr1 manual_curation mRNA 228213 232372 . - . ID=GSCOCT00012409001;Parent=GSCOCG00012409001;Name=Cc01_g00250 | |
| 414 chr1 manual_curation polypeptide 228213 232372 . - . ID=GSCOCP00012409001;Dbxref=GENE3D:G3DSA:3.30.310.10,InterPro:IPR000814,InterPro:IPR012294,InterPro:IPR012295,PANTHER:PTHR10126,PFAM:PF00352,PRINTS:PR00686,PROSITE:PS00351,SUPERFAMILY:SSF55945,SwissProt:P26357,SwissProt:P50159,SwissProt:Q42808,TAIR:AT1G55520.1,TrEMBL:B6SGQ4,TrEMBL:C5WQG2;Derives_from=GSCOCT00012409001;Name=Cc01_g00250;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003702,GO:0005488,GO:0006367,CC_EC_number:missing_EC_number,PRODUCT:TATA-box-binding protein,CC_functional_completeness:complete,CC_gene:TBP,CC_gene:TBP1,CC_gene:TBP2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012409001~ TATA-box-binding protein~ TBP~ complete;original_location=join(160310..160395%2C161139..161226%2C162091..162162%2C162428..162478%2C162665..162709%2C162949..163041%2C164046..164147%2C164383..164469);owner=coffea | |
| 415 chr1 manual_curation exon 232287 232372 . - . Parent=GSCOCT00012409001 | |
| 416 chr1 manual_curation exon 231456 231543 . - . Parent=GSCOCT00012409001 | |
| 417 chr1 manual_curation exon 230520 230591 . - . Parent=GSCOCT00012409001 | |
| 418 chr1 manual_curation exon 230204 230254 . - . Parent=GSCOCT00012409001 | |
| 419 chr1 manual_curation exon 229973 230017 . - . Parent=GSCOCT00012409001 | |
| 420 chr1 manual_curation exon 229641 229733 . - . Parent=GSCOCT00012409001 | |
| 421 chr1 manual_curation exon 228535 228636 . - . Parent=GSCOCT00012409001 | |
| 422 chr1 manual_curation exon 228213 228299 . - . Parent=GSCOCT00012409001 | |
| 423 chr1 manual_curation CDS 232287 232372 . - 0 Parent=GSCOCT00012409001 | |
| 424 chr1 manual_curation CDS 231456 231543 . - 2 Parent=GSCOCT00012409001 | |
| 425 chr1 manual_curation CDS 230520 230591 . - 0 Parent=GSCOCT00012409001 | |
| 426 chr1 manual_curation CDS 230204 230254 . - 0 Parent=GSCOCT00012409001 | |
| 427 chr1 manual_curation CDS 229973 230017 . - 0 Parent=GSCOCT00012409001 | |
| 428 chr1 manual_curation CDS 229641 229733 . - 0 Parent=GSCOCT00012409001 | |
| 429 chr1 manual_curation CDS 228535 228636 . - 0 Parent=GSCOCT00012409001 | |
| 430 chr1 manual_curation CDS 228213 228299 . - 0 Parent=GSCOCT00012409001 | |
| 431 chr1 manual_curation gene 244359 250736 . - . ID=GSCOCG00012408001;Name=Cc01_g00260 | |
| 432 chr1 manual_curation mRNA 244359 250736 . - . ID=GSCOCT00012408001;Parent=GSCOCG00012408001;Name=Cc01_g00260 | |
| 433 chr1 manual_curation polypeptide 244693 250603 . - . ID=GSCOCP00012408001;Dbxref=InterPro:IPR016803,PIR:PIRSF022280,TAIR:AT2G45060.1,TAIR:AT4G26410.1,TrEMBL:B9SBM3,TrEMBL:D7MF99,TrEMBL:D7SLP2;Derives_from=GSCOCT00012408001;Name=Cc01_g00260;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterised conserved protein UCP022280,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012408001~ Uncharacterised conserved protein UCP022280~ unknown_gene~ complete;original_location=join(142079..142312%2C143048..143114%2C143602..143679%2C145482..145534%2C145729..145865%2C145946..146010%2C147730..147788%2C147900..147989);owner=coffea | |
| 434 chr1 manual_curation exon 250370 250736 . - . Parent=GSCOCT00012408001 | |
| 435 chr1 manual_curation exon 249568 249634 . - . Parent=GSCOCT00012408001 | |
| 436 chr1 manual_curation exon 249003 249080 . - . Parent=GSCOCT00012408001 | |
| 437 chr1 manual_curation exon 247148 247200 . - . Parent=GSCOCT00012408001 | |
| 438 chr1 manual_curation exon 246817 246953 . - . Parent=GSCOCT00012408001 | |
| 439 chr1 manual_curation exon 246672 246736 . - . Parent=GSCOCT00012408001 | |
| 440 chr1 manual_curation exon 244894 244952 . - . Parent=GSCOCT00012408001 | |
| 441 chr1 manual_curation exon 244359 244782 . - . Parent=GSCOCT00012408001 | |
| 442 chr1 manual_curation CDS 250370 250603 . - 0 Parent=GSCOCT00012408001 | |
| 443 chr1 manual_curation CDS 249568 249634 . - 0 Parent=GSCOCT00012408001 | |
| 444 chr1 manual_curation CDS 249003 249080 . - 1 Parent=GSCOCT00012408001 | |
| 445 chr1 manual_curation CDS 247148 247200 . - 1 Parent=GSCOCT00012408001 | |
| 446 chr1 manual_curation CDS 246817 246953 . - 0 Parent=GSCOCT00012408001 | |
| 447 chr1 manual_curation CDS 246672 246736 . - 2 Parent=GSCOCT00012408001 | |
| 448 chr1 manual_curation CDS 244894 244952 . - 1 Parent=GSCOCT00012408001 | |
| 449 chr1 manual_curation CDS 244693 244782 . - 0 Parent=GSCOCT00012408001 | |
| 450 chr1 manual_curation gene 253251 263411 . + . ID=GSCOCG00012407001;Name=Cc01_g00270 | |
| 451 chr1 manual_curation mRNA 253251 263411 . + . ID=GSCOCT00012407001;Parent=GSCOCG00012407001;Name=Cc01_g00270 | |
| 452 chr1 manual_curation polypeptide 253934 262802 . + . ID=GSCOCP00012407001;Dbxref=TAIR:AT1G55535.1,TAIR:AT3G13420.1,TrEMBL:D7KMA4,TrEMBL:F4I1T5,TrEMBL:Q5XF13;Derives_from=GSCOCT00012407001;Name=Cc01_g00270;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012407001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: cultured cell%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13420.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(138647..138748%2C138131..138324%2C136317..136638%2C135379..135474%2C129880..129915));owner=coffea | |
| 453 chr1 manual_curation exon 262767 263411 . + . Parent=GSCOCT00012407001 | |
| 454 chr1 manual_curation exon 257208 257303 . + . Parent=GSCOCT00012407001 | |
| 455 chr1 manual_curation exon 256044 256365 . + . Parent=GSCOCT00012407001 | |
| 456 chr1 manual_curation exon 254358 254551 . + . Parent=GSCOCT00012407001 | |
| 457 chr1 manual_curation exon 253251 254035 . + . Parent=GSCOCT00012407001 | |
| 458 chr1 manual_curation CDS 262767 262802 . + 0 Parent=GSCOCT00012407001 | |
| 459 chr1 manual_curation CDS 257208 257303 . + 0 Parent=GSCOCT00012407001 | |
| 460 chr1 manual_curation CDS 256044 256365 . + 2 Parent=GSCOCT00012407001 | |
| 461 chr1 manual_curation CDS 254358 254551 . + 0 Parent=GSCOCT00012407001 | |
| 462 chr1 manual_curation CDS 253934 254035 . + 0 Parent=GSCOCT00012407001 | |
| 463 chr1 manual_curation gene 268645 270543 . + . ID=GSCOCG00012406001;Name=Cc01_g00280 | |
| 464 chr1 manual_curation mRNA 268645 270543 . + . ID=GSCOCT00012406001;Parent=GSCOCG00012406001;Name=Cc01_g00280 | |
| 465 chr1 manual_curation polypeptide 269389 270543 . + . ID=GSCOCP00012406001;Dbxref=InterPro:IPR001841,InterPro:IPR018957,PFAM:PF00097,PROFILE:PS50089,SMART:SM00184,SwissProt:P0CH30,SwissProt:Q8LPN7,SwissProt:Q9D0C1,TAIR:AT1G55530.1,TAIR:AT4G26400.2,TAIR:AT5G56340.1,TrEMBL:B9GXX2,TrEMBL:G7J9L6,TrEMBL:I1MY79;Derives_from=GSCOCT00012406001;Name=Cc01_g00280;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative E3 ubiquitin-protein ligase RNF115,CC_functional_completeness:complete,CC_gene:RING1,CC_gene:At3g19950,CC_gene:Rnf115;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012406001~ Putative E3 ubiquitin-protein ligase RNF115~ RING1~ complete;original_location=complement(122139..123293);owner=coffea | |
| 466 chr1 manual_curation exon 268645 270543 . + . Parent=GSCOCT00012406001 | |
| 467 chr1 manual_curation CDS 269389 270543 . + 0 Parent=GSCOCT00012406001 | |
| 468 chr1 manual_curation gene 272605 277291 . - . ID=GSCOCG00012404001;Name=Cc01_g00290 | |
| 469 chr1 manual_curation mRNA 272605 277291 . - . ID=GSCOCT00012404001;Parent=GSCOCG00012404001;Name=Cc01_g00290 | |
| 470 chr1 manual_curation polypeptide 272893 276789 . - . ID=GSCOCP00012404001;Dbxref=GENE3D:G3DSA:3.20.20.60,GENE3D:G3DSA:3.40.1380.20,InterPro:IPR001697,InterPro:IPR011037,InterPro:IPR015793,InterPro:IPR015794,InterPro:IPR015795,InterPro:IPR015813,InterPro:IPR018209,PANTHER:PTHR11817,PFAM:PF00224,PFAM:PF02887,PRINTS:PR01050,PROSITE:PS00110,SUPERFAMILY:SSF50800,SUPERFAMILY:SSF51621,SUPERFAMILY:SSF52935,SwissProt:O65595,SwissProt:Q42806,TAIR:AT4G26390.1,TAIR:AT5G08570.1,TAIR:AT5G56350.1,TIGRFAMs:TIGR01064,TrEMBL:G7JHK8,TrEMBL:I1KMC2;Derives_from=GSCOCT00012404001;Name=Cc01_g00290;Ontology_term=CC_evidence_code:ISS,GO:0000287,GO:0003824,GO:0004743,GO:0006096,GO:0030955,CC_EC_number:2.7.1.40,PRODUCT:Probable pyruvate kinase%2C cytosolic isozyme,CC_functional_completeness:complete,CC_gene:At4g26390;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012404001~ Probable pyruvate kinase%2C cytosolic isozyme~ At4g26390~ complete;original_location=join(115893..116015%2C117960..118421%2C118977..119789);owner=coffea | |
| 471 chr1 manual_curation exon 276667 277291 . - . Parent=GSCOCT00012404001 | |
| 472 chr1 manual_curation exon 274261 274722 . - . Parent=GSCOCT00012404001 | |
| 473 chr1 manual_curation exon 272605 273705 . - . Parent=GSCOCT00012404001 | |
| 474 chr1 manual_curation CDS 276667 276789 . - 0 Parent=GSCOCT00012404001 | |
| 475 chr1 manual_curation CDS 274261 274722 . - 0 Parent=GSCOCT00012404001 | |
| 476 chr1 manual_curation CDS 272893 273705 . - 0 Parent=GSCOCT00012404001 | |
| 477 chr1 manual_curation gene 279317 288970 . - . ID=GSCOCG00012403001;Name=Cc01_g00300 | |
| 478 chr1 manual_curation mRNA 279317 288970 . - . ID=GSCOCT00012403001;Parent=GSCOCG00012403001;Name=Cc01_g00300 | |
| 479 chr1 manual_curation polypeptide 279958 288510 . - . ID=GSCOCP00012403001;Dbxref=InterPro:IPR002172,InterPro:IPR009011,InterPro:IPR012913,PFAM:PF07915,SUPERFAMILY:SSF50911,SUPERFAMILY:SSF57424,SwissProt:O08795,SwissProt:P14314,SwissProt:Q9USH8,TAIR:AT2G42390.1,TAIR:AT5G56360.1,TrEMBL:B9GLB7,TrEMBL:B9GXX4,TrEMBL:D7SLN8;Derives_from=GSCOCT00012403001;Name=Cc01_g00300;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:calmodulin-binding protein,CC_functional_completeness:complete,CC_gene:Prkcsh,CC_gene:PRKCSH,CC_gene:gtb1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012403001~ calmodulin-binding protein~ Prkcsh~ complete;original_location=join(104172..104325%2C104489..104620%2C104741..104836%2C105128..105367%2C105986..106245%2C106713..106826%2C106926..106991%2C108514..108832%2C108959..109048%2C109130..109231%2C109388..109445%2C109525..109593%2C112072..112174%2C112316..112377%2C112496..112547%2C112662..112724);owner=coffea | |
| 480 chr1 manual_curation exon 288357 288970 . - . Parent=GSCOCT00012403001 | |
| 481 chr1 manual_curation exon 288062 288193 . - . Parent=GSCOCT00012403001 | |
| 482 chr1 manual_curation exon 287846 287941 . - . Parent=GSCOCT00012403001 | |
| 483 chr1 manual_curation exon 287315 287554 . - . Parent=GSCOCT00012403001 | |
| 484 chr1 manual_curation exon 286437 286696 . - . Parent=GSCOCT00012403001 | |
| 485 chr1 manual_curation exon 285856 285969 . - . Parent=GSCOCT00012403001 | |
| 486 chr1 manual_curation exon 285691 285756 . - . Parent=GSCOCT00012403001 | |
| 487 chr1 manual_curation exon 283850 284168 . - . Parent=GSCOCT00012403001 | |
| 488 chr1 manual_curation exon 283634 283723 . - . Parent=GSCOCT00012403001 | |
| 489 chr1 manual_curation exon 283451 283552 . - . Parent=GSCOCT00012403001 | |
| 490 chr1 manual_curation exon 283237 283294 . - . Parent=GSCOCT00012403001 | |
| 491 chr1 manual_curation exon 283089 283157 . - . Parent=GSCOCT00012403001 | |
| 492 chr1 manual_curation exon 280508 280610 . - . Parent=GSCOCT00012403001 | |
| 493 chr1 manual_curation exon 280305 280366 . - . Parent=GSCOCT00012403001 | |
| 494 chr1 manual_curation exon 280135 280186 . - . Parent=GSCOCT00012403001 | |
| 495 chr1 manual_curation exon 279317 280020 . - . Parent=GSCOCT00012403001 | |
| 496 chr1 manual_curation CDS 288357 288510 . - 0 Parent=GSCOCT00012403001 | |
| 497 chr1 manual_curation CDS 288062 288193 . - 1 Parent=GSCOCT00012403001 | |
| 498 chr1 manual_curation CDS 287846 287941 . - 1 Parent=GSCOCT00012403001 | |
| 499 chr1 manual_curation CDS 287315 287554 . - 1 Parent=GSCOCT00012403001 | |
| 500 chr1 manual_curation CDS 286437 286696 . - 1 Parent=GSCOCT00012403001 | |
| 501 chr1 manual_curation CDS 285856 285969 . - 0 Parent=GSCOCT00012403001 | |
| 502 chr1 manual_curation CDS 285691 285756 . - 0 Parent=GSCOCT00012403001 | |
| 503 chr1 manual_curation CDS 283850 284168 . - 0 Parent=GSCOCT00012403001 | |
| 504 chr1 manual_curation CDS 283634 283723 . - 1 Parent=GSCOCT00012403001 | |
| 505 chr1 manual_curation CDS 283451 283552 . - 1 Parent=GSCOCT00012403001 | |
| 506 chr1 manual_curation CDS 283237 283294 . - 1 Parent=GSCOCT00012403001 | |
| 507 chr1 manual_curation CDS 283089 283157 . - 2 Parent=GSCOCT00012403001 | |
| 508 chr1 manual_curation CDS 280508 280610 . - 2 Parent=GSCOCT00012403001 | |
| 509 chr1 manual_curation CDS 280305 280366 . - 0 Parent=GSCOCT00012403001 | |
| 510 chr1 manual_curation CDS 280135 280186 . - 2 Parent=GSCOCT00012403001 | |
| 511 chr1 manual_curation CDS 279958 280020 . - 0 Parent=GSCOCT00012403001 | |
| 512 chr1 manual_curation gene 290029 293677 . - . ID=GSCOCG00012402001;Name=Cc01_g00310 | |
| 513 chr1 manual_curation mRNA 290029 293677 . - . ID=GSCOCT00012402001;Parent=GSCOCG00012402001;Name=Cc01_g00310 | |
| 514 chr1 manual_curation polypeptide 290290 293616 . - . ID=GSCOCP00012402001;Dbxref=InterPro:IPR007653,PANTHER:PTHR12804,PFAM:PF04573,PIR:PIRSF016089,SwissProt:Q53YF3,SwissProt:Q9LGB4,SwissProt:Q9MA96,TAIR:AT3G05230.1,TAIR:AT5G27430.1,TrEMBL:B9RF33,TrEMBL:I1JRE6,TrEMBL:I1NC08;Derives_from=GSCOCT00012402001;Name=Cc01_g00310;Ontology_term=CC_evidence_code:ISS,GO:0005787,GO:0006465,GO:0008233,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Signal peptidase complex subunit 3B,CC_functional_completeness:complete,CC_gene:At5g27430,CC_gene:At3g05230,CC_gene:Os01g0131800;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012402001~ Signal peptidase complex subunit 3B~ At5g27430~ complete;original_location=join(99066..99191%2C99351..99398%2C100393..100455%2C101244..101297%2C102093..102179%2C102267..102392);owner=coffea | |
| 515 chr1 manual_curation exon 293491 293677 . - . Parent=GSCOCT00012402001 | |
| 516 chr1 manual_curation exon 293284 293331 . - . Parent=GSCOCT00012402001 | |
| 517 chr1 manual_curation exon 292227 292289 . - . Parent=GSCOCT00012402001 | |
| 518 chr1 manual_curation exon 291385 291438 . - . Parent=GSCOCT00012402001 | |
| 519 chr1 manual_curation exon 290503 290589 . - . Parent=GSCOCT00012402001 | |
| 520 chr1 manual_curation exon 290029 290415 . - . Parent=GSCOCT00012402001 | |
| 521 chr1 manual_curation CDS 293491 293616 . - 0 Parent=GSCOCT00012402001 | |
| 522 chr1 manual_curation CDS 293284 293331 . - 0 Parent=GSCOCT00012402001 | |
| 523 chr1 manual_curation CDS 292227 292289 . - 0 Parent=GSCOCT00012402001 | |
| 524 chr1 manual_curation CDS 291385 291438 . - 0 Parent=GSCOCT00012402001 | |
| 525 chr1 manual_curation CDS 290503 290589 . - 0 Parent=GSCOCT00012402001 | |
| 526 chr1 manual_curation CDS 290290 290415 . - 0 Parent=GSCOCT00012402001 | |
| 527 chr1 manual_curation gene 300133 305405 . + . ID=GSCOCG00012401001;Name=Cc01_g00320 | |
| 528 chr1 manual_curation mRNA 300133 305405 . + . ID=GSCOCT00012401001;Parent=GSCOCG00012401001;Name=Cc01_g00320 | |
| 529 chr1 manual_curation polypeptide 300630 304797 . + . ID=GSCOCP00012401001;Dbxref=GENE3D:G3DSA:1.10.940.10,InterPro:IPR006027,PFAM:PF01029,SUPERFAMILY:SSF48013,TAIR:AT4G26370.1,TrEMBL:B9GXX5,TrEMBL:D7MFA2,TrEMBL:D7SLN6;Derives_from=GSCOCT00012401001;Name=Cc01_g00320;Ontology_term=CC_evidence_code:ISS,GO:0003723,CC_EC_number:missing_EC_number,PRODUCT:antitermination NusB domain-containing protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012401001~ antitermination NusB domain-containing protein~ unknown_gene~ fragment;original_location=complement(join(91988..92052%2C91740..91816%2C91460..91594%2C89754..89808%2C89588..89675%2C88313..88411%2C87885..88001));owner=coffea | |
| 530 chr1 manual_curation exon 304681 305405 . + . Parent=GSCOCT00012401001 | |
| 531 chr1 manual_curation exon 304271 304369 . + . Parent=GSCOCT00012401001 | |
| 532 chr1 manual_curation exon 303007 303094 . + . Parent=GSCOCT00012401001 | |
| 533 chr1 manual_curation exon 302874 302928 . + . Parent=GSCOCT00012401001 | |
| 534 chr1 manual_curation exon 301088 301222 . + . Parent=GSCOCT00012401001 | |
| 535 chr1 manual_curation exon 300866 300942 . + . Parent=GSCOCT00012401001 | |
| 536 chr1 manual_curation exon 300133 300694 . + . Parent=GSCOCT00012401001 | |
| 537 chr1 manual_curation CDS 304681 304797 . + 0 Parent=GSCOCT00012401001 | |
| 538 chr1 manual_curation CDS 304271 304369 . + 0 Parent=GSCOCT00012401001 | |
| 539 chr1 manual_curation CDS 303007 303094 . + 2 Parent=GSCOCT00012401001 | |
| 540 chr1 manual_curation CDS 302874 302928 . + 1 Parent=GSCOCT00012401001 | |
| 541 chr1 manual_curation CDS 301088 301222 . + 1 Parent=GSCOCT00012401001 | |
| 542 chr1 manual_curation CDS 300866 300942 . + 2 Parent=GSCOCT00012401001 | |
| 543 chr1 manual_curation CDS 300630 300694 . + 0 Parent=GSCOCT00012401001 | |
| 544 chr1 manual_curation gene 310211 329956 . - . ID=GSCOCG00012399001;Name=Cc01_g00330 | |
| 545 chr1 manual_curation mRNA 310211 329956 . - . ID=GSCOCT00012399001;Parent=GSCOCG00012399001;Name=Cc01_g00330 | |
| 546 chr1 manual_curation polypeptide 310724 329679 . - . ID=GSCOCP00012399001;Dbxref=TAIR:AT1G55540.2,TrEMBL:B9SBM1,TrEMBL:F6GUP6,TrEMBL:I1MYG1;Derives_from=GSCOCT00012399001;Name=Cc01_g00330;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012399001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=join(63003..63234%2C63398..63606%2C64519..64687%2C64941..65064%2C65138..65163%2C65501..65625%2C68081..68193%2C70235..70374%2C72440..72602%2C72713..73709%2C74142..74294%2C75114..75171%2C76987..77120%2C77192..77316%2C77538..77883%2C79620..79821%2C79926..81761%2C81846..81958);owner=coffea | |
| 547 chr1 manual_curation exon 329448 329956 . - . Parent=GSCOCT00012399001 | |
| 548 chr1 manual_curation exon 329076 329284 . - . Parent=GSCOCT00012399001 | |
| 549 chr1 manual_curation exon 327995 328163 . - . Parent=GSCOCT00012399001 | |
| 550 chr1 manual_curation exon 327618 327741 . - . Parent=GSCOCT00012399001 | |
| 551 chr1 manual_curation exon 327519 327544 . - . Parent=GSCOCT00012399001 | |
| 552 chr1 manual_curation exon 327057 327181 . - . Parent=GSCOCT00012399001 | |
| 553 chr1 manual_curation exon 324489 324601 . - . Parent=GSCOCT00012399001 | |
| 554 chr1 manual_curation exon 322308 322447 . - . Parent=GSCOCT00012399001 | |
| 555 chr1 manual_curation exon 320080 320242 . - . Parent=GSCOCT00012399001 | |
| 556 chr1 manual_curation exon 318973 319969 . - . Parent=GSCOCT00012399001 | |
| 557 chr1 manual_curation exon 318388 318540 . - . Parent=GSCOCT00012399001 | |
| 558 chr1 manual_curation exon 317511 317568 . - . Parent=GSCOCT00012399001 | |
| 559 chr1 manual_curation exon 315562 315695 . - . Parent=GSCOCT00012399001 | |
| 560 chr1 manual_curation exon 315366 315490 . - . Parent=GSCOCT00012399001 | |
| 561 chr1 manual_curation exon 314799 315144 . - . Parent=GSCOCT00012399001 | |
| 562 chr1 manual_curation exon 312861 313062 . - . Parent=GSCOCT00012399001 | |
| 563 chr1 manual_curation exon 310921 312756 . - . Parent=GSCOCT00012399001 | |
| 564 chr1 manual_curation exon 310211 310836 . - . Parent=GSCOCT00012399001 | |
| 565 chr1 manual_curation CDS 329448 329679 . - 0 Parent=GSCOCT00012399001 | |
| 566 chr1 manual_curation CDS 329076 329284 . - 1 Parent=GSCOCT00012399001 | |
| 567 chr1 manual_curation CDS 327995 328163 . - 0 Parent=GSCOCT00012399001 | |
| 568 chr1 manual_curation CDS 327618 327741 . - 1 Parent=GSCOCT00012399001 | |
| 569 chr1 manual_curation CDS 327519 327544 . - 2 Parent=GSCOCT00012399001 | |
| 570 chr1 manual_curation CDS 327057 327181 . - 1 Parent=GSCOCT00012399001 | |
| 571 chr1 manual_curation CDS 324489 324601 . - 0 Parent=GSCOCT00012399001 | |
| 572 chr1 manual_curation CDS 322308 322447 . - 2 Parent=GSCOCT00012399001 | |
| 573 chr1 manual_curation CDS 320080 320242 . - 1 Parent=GSCOCT00012399001 | |
| 574 chr1 manual_curation CDS 318973 319969 . - 2 Parent=GSCOCT00012399001 | |
| 575 chr1 manual_curation CDS 318388 318540 . - 0 Parent=GSCOCT00012399001 | |
| 576 chr1 manual_curation CDS 317511 317568 . - 0 Parent=GSCOCT00012399001 | |
| 577 chr1 manual_curation CDS 315562 315695 . - 1 Parent=GSCOCT00012399001 | |
| 578 chr1 manual_curation CDS 315366 315490 . - 0 Parent=GSCOCT00012399001 | |
| 579 chr1 manual_curation CDS 314799 315144 . - 2 Parent=GSCOCT00012399001 | |
| 580 chr1 manual_curation CDS 312861 313062 . - 0 Parent=GSCOCT00012399001 | |
| 581 chr1 manual_curation CDS 310921 312756 . - 1 Parent=GSCOCT00012399001 | |
| 582 chr1 manual_curation CDS 310724 310836 . - 1 Parent=GSCOCT00012399001 | |
| 583 chr1 manual_curation gene 330648 331301 . + . ID=GSCOCG00012398001;Name=Cc01_g00340 | |
| 584 chr1 manual_curation mRNA 330648 331301 . + . ID=GSCOCT00012398001;Parent=GSCOCG00012398001;Name=Cc01_g00340 | |
| 585 chr1 manual_curation polypeptide 330648 331301 . + . ID=GSCOCP00012398001;Dbxref=InterPro:IPR001623,SUPERFAMILY:SSF46565,SwissProt:Q9FIG9,TAIR:AT5G42480.1,TrEMBL:B9H4J0,TrEMBL:F6I050,TrEMBL:G8Z271;Derives_from=GSCOCT00012398001;Name=Cc01_g00340;Ontology_term=CC_evidence_code:ISS,GO:0031072,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:ARC6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012398001~ Putative Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6%2C chloroplastic~ ARC6~ fragment;original_location=complement(join(61979..62034%2C61381..61924));owner=coffea | |
| 586 chr1 manual_curation exon 330758 331301 . + . Parent=GSCOCT00012398001 | |
| 587 chr1 manual_curation exon 330648 330703 . + . Parent=GSCOCT00012398001 | |
| 588 chr1 manual_curation CDS 330758 331301 . + 2 Parent=GSCOCT00012398001 | |
| 589 chr1 manual_curation CDS 330648 330703 . + 0 Parent=GSCOCT00012398001 | |
| 590 chr1 manual_curation gene 339278 347158 . + . ID=GSCOCG00012397001;Name=Cc01_g00350 | |
| 591 chr1 manual_curation mRNA 339278 347158 . + . ID=GSCOCT00012397001;Parent=GSCOCG00012397001;Name=Cc01_g00350 | |
| 592 chr1 manual_curation polypeptide 339755 346740 . + . ID=GSCOCP00012397001;Dbxref=InterPro:IPR006628,PANTHER:PTHR12611,PFAM:PF04845,SMART:SM00712,SwissProt:P42669,SwissProt:Q6PHK6,SwissProt:Q9SKZ1,TAIR:AT2G32080.1,TrEMBL:C6TG15,TrEMBL:I1KMC5;Derives_from=GSCOCT00012397001;Name=Cc01_g00350;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Transcription factor Pur-alpha 1,CC_functional_completeness:complete,CC_gene:PURA1,CC_gene:purb,CC_gene:Pura;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012397001~ Transcription factor Pur-alpha 1~ PURA1~ complete;original_location=complement(join(52688..52927%2C52504..52551%2C46542..46682%2C46202..46441%2C45942..46094));owner=coffea | |
| 593 chr1 manual_curation exon 346588 347158 . + . Parent=GSCOCT00012397001 | |
| 594 chr1 manual_curation exon 346241 346480 . + . Parent=GSCOCT00012397001 | |
| 595 chr1 manual_curation exon 346000 346140 . + . Parent=GSCOCT00012397001 | |
| 596 chr1 manual_curation exon 340131 340178 . + . Parent=GSCOCT00012397001 | |
| 597 chr1 manual_curation exon 339278 339994 . + . Parent=GSCOCT00012397001 | |
| 598 chr1 manual_curation CDS 346588 346740 . + 0 Parent=GSCOCT00012397001 | |
| 599 chr1 manual_curation CDS 346241 346480 . + 0 Parent=GSCOCT00012397001 | |
| 600 chr1 manual_curation CDS 346000 346140 . + 0 Parent=GSCOCT00012397001 | |
| 601 chr1 manual_curation CDS 340131 340178 . + 0 Parent=GSCOCT00012397001 | |
| 602 chr1 manual_curation CDS 339755 339994 . + 0 Parent=GSCOCT00012397001 | |
| 603 chr1 manual_curation gene 349809 351482 . + . ID=GSCOCG00012396001;Name=Cc01_g00360 | |
| 604 chr1 manual_curation mRNA 349809 351482 . + . ID=GSCOCT00012396001;Parent=GSCOCG00012396001;Name=Cc01_g00360 | |
| 605 chr1 manual_curation polypeptide 349809 351482 . + . ID=GSCOCP00012396001;Dbxref=GENE3D:G3DSA:2.60.40.420,InterPro:IPR001117,InterPro:IPR008972,InterPro:IPR011706,InterPro:IPR011707,PFAM:PF00394,PFAM:PF07731,PFAM:PF07732,SUPERFAMILY:SSF49503,SwissProt:P29162,SwissProt:Q00624,SwissProt:Q9FHN6,TAIR:AT1G55560.1,TAIR:AT1G55570.1,TAIR:AT3G13400.1,TrEMBL:Q6UN73,TrEMBL:Q6UN74,TrEMBL:Q6UN75;Derives_from=GSCOCT00012396001;Name=Cc01_g00360;Ontology_term=CC_evidence_code:ISS,GO:0005507,GO:0016491,GO:0055114,CC_EC_number:1.10.3.3,PRODUCT:L-ascorbate oxidase homolog,CC_functional_completeness:complete,CC_gene:Bp10,CC_gene:SKS2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012396001~ L-ascorbate oxidase homolog~ Bp10~ complete;original_location=complement(41200..42873);owner=coffea | |
| 606 chr1 manual_curation exon 349809 351482 . + . Parent=GSCOCT00012396001 | |
| 607 chr1 manual_curation CDS 349809 351482 . + 0 Parent=GSCOCT00012396001 | |
| 608 chr1 manual_curation gene 392902 393783 . + . ID=GSCOCG00013679001;Name=Cc01_g00370 | |
| 609 chr1 manual_curation mRNA 392902 393783 . + . ID=GSCOCT00013679001;Parent=GSCOCG00013679001;Name=Cc01_g00370 | |
| 610 chr1 manual_curation polypeptide 392902 393783 . + . ID=GSCOCP00013679001;Dbxref=InterPro:IPR003480,PFAM:PF02458,SwissProt:Q5H873,SwissProt:Q8GT20,SwissProt:Q8GT21,TAIR:AT3G03480.1,TAIR:AT5G17540.1,TAIR:AT5G41040.1,TrEMBL:A4F1S1,TrEMBL:Q43583,TrEMBL:Q5I2Q5;Derives_from=GSCOCT00013679001;Name=Cc01_g00370;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.3.1.162,PRODUCT:Benzyl alcohol O-benzoyltransferase,CC_functional_completeness:fragment,CC_gene:HSR201,CC_gene:HMT/HLT;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013679001~ Benzyl alcohol O-benzoyltransferase~ HSR201~ fragment;original_location=121..1002;owner=coffea | |
| 611 chr1 manual_curation exon 392902 393783 . + . Parent=GSCOCT00013679001 | |
| 612 chr1 manual_curation CDS 392902 393783 . + 0 Parent=GSCOCT00013679001 | |
| 613 chr1 manual_curation gene 396846 400506 . + . ID=GSCOCG00013680001;Name=Cc01_g00380 | |
| 614 chr1 manual_curation mRNA 396846 400506 . + . ID=GSCOCT00013680001;Parent=GSCOCG00013680001;Name=Cc01_g00380 | |
| 615 chr1 manual_curation polypeptide 397146 399824 . + . ID=GSCOCP00013680001;Dbxref=InterPro:IPR003480,PFAM:PF02458,SwissProt:Q8GT20,SwissProt:Q8GT21,SwissProt:Q9SRQ2,TAIR:AT3G03480.1,TAIR:AT5G17540.1,TAIR:AT5G41040.1,TrEMBL:Q43583,TrEMBL:Q5I2Q5,TrEMBL:Q6E593;Derives_from=GSCOCT00013680001;Name=Cc01_g00380;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.3.1.162,PRODUCT:Benzyl alcohol O-benzoyltransferase,CC_functional_completeness:complete,CC_gene:HSR201,CC_gene:CHAT;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013680001~ Benzyl alcohol O-benzoyltransferase~ HSR201~ complete;original_location=join(4365..4799%2C6108..7043);owner=coffea | |
| 616 chr1 manual_curation exon 396846 397580 . + . Parent=GSCOCT00013680001 | |
| 617 chr1 manual_curation exon 398889 400506 . + . Parent=GSCOCT00013680001 | |
| 618 chr1 manual_curation CDS 397146 397580 . + 0 Parent=GSCOCT00013680001 | |
| 619 chr1 manual_curation CDS 398889 399824 . + 0 Parent=GSCOCT00013680001 | |
| 620 chr1 manual_curation gene 419818 426557 . + . ID=GSCOCG00005539001;Name=Cc01_g00390 | |
| 621 chr1 manual_curation mRNA 419818 426557 . + . ID=GSCOCT00005539001;Parent=GSCOCG00005539001;Name=Cc01_g00390 | |
| 622 chr1 manual_curation polypeptide 419818 422904 . + . ID=GSCOCP00005539001;Dbxref=InterPro:IPR000767,InterPro:IPR001611,InterPro:IPR002182,PFAM:PF00560,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q7XA40,SwissProt:Q7XA42,SwissProt:Q7XBQ9,TAIR:AT3G07040.1,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TrEMBL:B9IP06,TrEMBL:B9NBB7,TrEMBL:B9NBC0;Derives_from=GSCOCT00005539001;Name=Cc01_g00390;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative Disease resistance protein RGA2,CC_functional_completeness:complete,CC_gene:RGA2,CC_gene:RGA3,CC_gene:RGA1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005539001~ Putative Disease resistance protein RGA2~ RGA2~ complete;original_location=join(18782..20774%2C20925..21557%2C21645..21868);owner=coffea | |
| 623 chr1 manual_curation exon 423454 423756 . + . Parent=GSCOCT00005539001 | |
| 624 chr1 manual_curation exon 423861 424027 . + . Parent=GSCOCT00005539001 | |
| 625 chr1 manual_curation exon 424149 424571 . + . Parent=GSCOCT00005539001 | |
| 626 chr1 manual_curation exon 425542 425656 . + . Parent=GSCOCT00005539001 | |
| 627 chr1 manual_curation exon 426128 426557 . + . Parent=GSCOCT00005539001 | |
| 628 chr1 manual_curation exon 419818 421810 . + . Parent=GSCOCT00005539001 | |
| 629 chr1 manual_curation exon 421961 422593 . + . Parent=GSCOCT00005539001 | |
| 630 chr1 manual_curation exon 422681 422978 . + . Parent=GSCOCT00005539001 | |
| 631 chr1 manual_curation CDS 419818 421810 . + 0 Parent=GSCOCT00005539001 | |
| 632 chr1 manual_curation CDS 421961 422593 . + 1 Parent=GSCOCT00005539001 | |
| 633 chr1 manual_curation CDS 422681 422904 . + 1 Parent=GSCOCT00005539001 | |
| 634 chr1 manual_curation gene 443413 444149 . - . ID=GSCOCG00005540001;Name=Cc01_g00400 | |
| 635 chr1 manual_curation mRNA 443413 444149 . - . ID=GSCOCT00005540001;Parent=GSCOCG00005540001;Name=Cc01_g00400 | |
| 636 chr1 manual_curation polypeptide 443413 444149 . - . ID=GSCOCP00005540001;Dbxref=TrEMBL:B9INK9,TrEMBL:B9SD86,TrEMBL:D7SJI2;Derives_from=GSCOCT00005540001;Name=Cc01_g00400;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005540001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=complement(join(43027..43113%2C42842..42916%2C42377..42553));owner=coffea | |
| 637 chr1 manual_curation exon 443413 443589 . - . Parent=GSCOCT00005540001 | |
| 638 chr1 manual_curation exon 443878 443952 . - . Parent=GSCOCT00005540001 | |
| 639 chr1 manual_curation exon 444063 444149 . - . Parent=GSCOCT00005540001 | |
| 640 chr1 manual_curation CDS 443413 443589 . - 0 Parent=GSCOCT00005540001 | |
| 641 chr1 manual_curation CDS 443878 443952 . - 0 Parent=GSCOCT00005540001 | |
| 642 chr1 manual_curation CDS 444063 444149 . - 0 Parent=GSCOCT00005540001 | |
| 643 chr1 manual_curation gene 444874 445382 . - . ID=GSCOCG00005541001;Name=Cc01_g00410 | |
| 644 chr1 manual_curation mRNA 444874 445382 . - . ID=GSCOCT00005541001;Parent=GSCOCG00005541001;Name=Cc01_g00410 | |
| 645 chr1 manual_curation polypeptide 444874 445382 . - . ID=GSCOCP00005541001;Dbxref=GENE3D:G3DSA:2.60.120.200,InterPro:IPR001580,InterPro:IPR009169,InterPro:IPR013320,PANTHER:PTHR11073,PANTHER:PTHR11073:SF2,SwissProt:O81919,SwissProt:Q9ZPP1,TAIR:AT1G09210.1,TrEMBL:I1GLA0,TrEMBL:I1GLA4,TrEMBL:Q7Y140;Derives_from=GSCOCT00005541001;Name=Cc01_g00410;Ontology_term=CC_evidence_code:ISS,GO:0005509,GO:0005783,GO:0006457,GO:0051082,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:CRT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005541001~ Hypothetical protein~ CRT1~ missing_functional_completeness;original_location=complement(join(44315..44346%2C44102..44234%2C43838..43996));owner=coffea | |
| 646 chr1 manual_curation exon 444874 445032 . - . Parent=GSCOCT00005541001 | |
| 647 chr1 manual_curation exon 445138 445270 . - . Parent=GSCOCT00005541001 | |
| 648 chr1 manual_curation exon 445351 445382 . - . Parent=GSCOCT00005541001 | |
| 649 chr1 manual_curation CDS 444874 445032 . - 0 Parent=GSCOCT00005541001 | |
| 650 chr1 manual_curation CDS 445138 445270 . - 2 Parent=GSCOCT00005541001 | |
| 651 chr1 manual_curation CDS 445351 445382 . - 0 Parent=GSCOCT00005541001 | |
| 652 chr1 manual_curation gene 558593 564647 . + . ID=GSCOCG00005542001;Name=Cc01_g00420 | |
| 653 chr1 manual_curation mRNA 558593 564647 . + . ID=GSCOCT00005542001;Parent=GSCOCG00005542001;Name=Cc01_g00420 | |
| 654 chr1 manual_curation polypeptide 558593 564647 . + . ID=GSCOCP00005542001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q7XA40,SwissProt:Q7XA42,SwissProt:Q7XBQ9,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TAIR:AT3G46710.1,TrEMBL:B9NBB7,TrEMBL:B9NBC0,TrEMBL:B9NED8;Derives_from=GSCOCT00005542001;Name=Cc01_g00420;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance protein RGA3,CC_functional_completeness:complete,CC_gene:RGA3,CC_gene:RGA2,CC_gene:RGA1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005542001~ Putative disease resistance protein RGA3~ RGA3~ complete;original_location=join(157557..158795%2C159923..160446%2C160536..162181%2C162251..162520%2C162560..162993%2C163075..163611);owner=coffea | |
| 655 chr1 manual_curation exon 558593 559831 . + . Parent=GSCOCT00005542001 | |
| 656 chr1 manual_curation exon 560959 561482 . + . Parent=GSCOCT00005542001 | |
| 657 chr1 manual_curation exon 561572 563217 . + . Parent=GSCOCT00005542001 | |
| 658 chr1 manual_curation exon 563287 563556 . + . Parent=GSCOCT00005542001 | |
| 659 chr1 manual_curation exon 563596 564029 . + . Parent=GSCOCT00005542001 | |
| 660 chr1 manual_curation exon 564111 564647 . + . Parent=GSCOCT00005542001 | |
| 661 chr1 manual_curation CDS 558593 559831 . + 0 Parent=GSCOCT00005542001 | |
| 662 chr1 manual_curation CDS 560959 561482 . + 0 Parent=GSCOCT00005542001 | |
| 663 chr1 manual_curation CDS 561572 563217 . + 2 Parent=GSCOCT00005542001 | |
| 664 chr1 manual_curation CDS 563287 563556 . + 1 Parent=GSCOCT00005542001 | |
| 665 chr1 manual_curation CDS 563596 564029 . + 1 Parent=GSCOCT00005542001 | |
| 666 chr1 manual_curation CDS 564111 564647 . + 0 Parent=GSCOCT00005542001 | |
| 667 chr1 manual_curation gene 624484 628011 . + . ID=GSCOCG00011017001;Name=Cc01_g00430 | |
| 668 chr1 manual_curation mRNA 624484 628011 . + . ID=GSCOCT00011017001;Parent=GSCOCG00011017001;Name=Cc01_g00430 | |
| 669 chr1 manual_curation polypeptide 624778 628011 . + . ID=GSCOCP00011017001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q7XA39,SwissProt:Q7XA40,SwissProt:Q7XA42,TAIR:AT3G07040.1,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TrEMBL:B9IBB8,TrEMBL:B9NBB7,TrEMBL:B9NED8;Derives_from=GSCOCT00011017001;Name=Cc01_g00430;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance protein RGA3,CC_functional_completeness:fragment,CC_gene:RGA3,CC_gene:RGA1,CC_gene:RGA4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011017001~ Putative disease resistance protein RGA3~ RGA3~ fragment;original_location=join(19490..20423%2C20577..21293%2C21327..21920%2C22017..22193%2C22284..22723);owner=coffea | |
| 670 chr1 manual_curation exon 624484 625711 . + . Parent=GSCOCT00011017001 | |
| 671 chr1 manual_curation exon 625865 626581 . + . Parent=GSCOCT00011017001 | |
| 672 chr1 manual_curation exon 626615 627208 . + . Parent=GSCOCT00011017001 | |
| 673 chr1 manual_curation exon 627305 627481 . + . Parent=GSCOCT00011017001 | |
| 674 chr1 manual_curation exon 627572 628011 . + . Parent=GSCOCT00011017001 | |
| 675 chr1 manual_curation CDS 624778 625711 . + 0 Parent=GSCOCT00011017001 | |
| 676 chr1 manual_curation CDS 625865 626581 . + 1 Parent=GSCOCT00011017001 | |
| 677 chr1 manual_curation CDS 626615 627208 . + 1 Parent=GSCOCT00011017001 | |
| 678 chr1 manual_curation CDS 627305 627481 . + 1 Parent=GSCOCT00011017001 | |
| 679 chr1 manual_curation CDS 627572 628011 . + 1 Parent=GSCOCT00011017001 | |
| 680 chr1 manual_curation gene 693156 696902 . + . ID=GSCOCG00011020001;Name=Cc01_g00440 | |
| 681 chr1 manual_curation mRNA 693156 696902 . + . ID=GSCOCT00011020001;Parent=GSCOCG00011020001;Name=Cc01_g00440 | |
| 682 chr1 manual_curation polypeptide 693156 696902 . + . ID=GSCOCP00011020001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q7XA39,SwissProt:Q7XA40,SwissProt:Q7XBQ9,TAIR:AT1G59218.1,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TrEMBL:B9NBB7,TrEMBL:B9NED8,TrEMBL:Q19PN6;Derives_from=GSCOCT00011020001;Name=Cc01_g00440;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative Disease resistance protein RGA2,CC_functional_completeness:complete,CC_gene:RGA2,CC_gene:RGA3,CC_gene:RGA4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011020001~ Putative Disease resistance protein RGA2~ RGA2~ complete;original_location=join(87868..88305%2C88357..90286%2C90326..90523%2C90659..91168%2C91223..91614);owner=coffea | |
| 683 chr1 manual_curation exon 693156 693593 . + . Parent=GSCOCT00011020001 | |
| 684 chr1 manual_curation exon 693645 695574 . + . Parent=GSCOCT00011020001 | |
| 685 chr1 manual_curation exon 695614 695811 . + . Parent=GSCOCT00011020001 | |
| 686 chr1 manual_curation exon 695947 696456 . + . Parent=GSCOCT00011020001 | |
| 687 chr1 manual_curation exon 696511 696902 . + . Parent=GSCOCT00011020001 | |
| 688 chr1 manual_curation CDS 693156 693593 . + 0 Parent=GSCOCT00011020001 | |
| 689 chr1 manual_curation CDS 693645 695574 . + 0 Parent=GSCOCT00011020001 | |
| 690 chr1 manual_curation CDS 695614 695811 . + 1 Parent=GSCOCT00011020001 | |
| 691 chr1 manual_curation CDS 695947 696456 . + 1 Parent=GSCOCT00011020001 | |
| 692 chr1 manual_curation CDS 696511 696902 . + 1 Parent=GSCOCT00011020001 | |
| 693 chr1 manual_curation gene 697656 698456 . + . ID=GSCOCG00011021001;Name=Cc01_g00450 | |
| 694 chr1 manual_curation mRNA 697656 698456 . + . ID=GSCOCT00011021001;Parent=GSCOCG00011021001;Name=Cc01_g00450 | |
| 695 chr1 manual_curation polypeptide 698113 698456 . + . ID=GSCOCP00011021001;Derives_from=GSCOCT00011021001;Name=Cc01_g00450;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011021001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(92825..92857%2C92977..93168);owner=coffea | |
| 696 chr1 manual_curation exon 697656 697767 . + . Parent=GSCOCT00011021001 | |
| 697 chr1 manual_curation exon 697959 698145 . + . Parent=GSCOCT00011021001 | |
| 698 chr1 manual_curation exon 698265 698456 . + . Parent=GSCOCT00011021001 | |
| 699 chr1 manual_curation CDS 698113 698145 . + 0 Parent=GSCOCT00011021001 | |
| 700 chr1 manual_curation CDS 698265 698456 . + 0 Parent=GSCOCT00011021001 | |
| 701 chr1 manual_curation gene 702169 703824 . - . ID=GSCOCG00011023001;Name=Cc01_g00460 | |
| 702 chr1 manual_curation mRNA 702169 703824 . - . ID=GSCOCT00011023001;Parent=GSCOCG00011023001;Name=Cc01_g00460 | |
| 703 chr1 manual_curation polypeptide 702169 703824 . - . ID=GSCOCP00011023001;Dbxref=InterPro:IPR005299,PFAM:PF03492,SwissProt:Q9AVK0,SwissProt:Q9AVK1,SwissProt:Q9AVL9,TAIR:AT3G11480.1,TAIR:AT3G21950.1,TAIR:AT5G66430.1,TrEMBL:E5Q8J7,TrEMBL:Q84PP6,TrEMBL:Q8RVL9;Derives_from=GSCOCT00011023001;Name=Cc01_g00460;Ontology_term=CC_evidence_code:ISS,GO:0008168,CC_EC_number:2.1.1.141,PRODUCT:Putative Probable caffeine synthase 4,CC_functional_completeness:fragment,CC_gene:CS4,CC_gene:CS3,CC_gene:XMT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011023001~ Putative Probable caffeine synthase 4~ CS4~ fragment;original_location=complement(join(98468..98536%2C98262..98389%2C97966..98185%2C97154..97414%2C96881..97078));owner=coffea | |
| 704 chr1 manual_curation exon 702169 702366 . - . Parent=GSCOCT00011023001 | |
| 705 chr1 manual_curation exon 702442 702702 . - . Parent=GSCOCT00011023001 | |
| 706 chr1 manual_curation exon 703254 703473 . - . Parent=GSCOCT00011023001 | |
| 707 chr1 manual_curation exon 703550 703677 . - . Parent=GSCOCT00011023001 | |
| 708 chr1 manual_curation exon 703756 703824 . - . Parent=GSCOCT00011023001 | |
| 709 chr1 manual_curation CDS 702169 702366 . - 0 Parent=GSCOCT00011023001 | |
| 710 chr1 manual_curation CDS 702442 702702 . - 0 Parent=GSCOCT00011023001 | |
| 711 chr1 manual_curation CDS 703254 703473 . - 2 Parent=GSCOCT00011023001 | |
| 712 chr1 manual_curation CDS 703550 703677 . - 0 Parent=GSCOCT00011023001 | |
| 713 chr1 manual_curation CDS 703756 703824 . - 0 Parent=GSCOCT00011023001 | |
| 714 chr1 manual_curation gene 714435 718476 . + . ID=GSCOCG00011024001;Name=Cc01_g00470 | |
| 715 chr1 manual_curation mRNA 714435 718476 . + . ID=GSCOCT00011024001;Parent=GSCOCG00011024001;Name=Cc01_g00470 | |
| 716 chr1 manual_curation polypeptide 714435 717493 . + . ID=GSCOCP00011024001;Dbxref=InterPro:IPR002182,PFAM:PF00931,SwissProt:Q7XA40,SwissProt:Q7XA42,SwissProt:Q7XBQ9,TAIR:AT1G58400.1,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TrEMBL:B9NBB7,TrEMBL:B9NBC0,TrEMBL:Q19PN6;Derives_from=GSCOCT00011024001;Name=Cc01_g00470;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance protein RGA1,CC_functional_completeness:fragment,CC_gene:RGA1,CC_gene:RGA3,CC_gene:RGA2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011024001~ Putative disease resistance protein RGA1~ RGA1~ fragment;original_location=join(109147..109412%2C109514..110907%2C111019..111744%2C111979..112205);owner=coffea | |
| 717 chr1 manual_curation exon 714435 714700 . + . Parent=GSCOCT00011024001 | |
| 718 chr1 manual_curation exon 714802 716195 . + . Parent=GSCOCT00011024001 | |
| 719 chr1 manual_curation exon 716307 717032 . + . Parent=GSCOCT00011024001 | |
| 720 chr1 manual_curation exon 717267 718476 . + . Parent=GSCOCT00011024001 | |
| 721 chr1 manual_curation CDS 714435 714700 . + 0 Parent=GSCOCT00011024001 | |
| 722 chr1 manual_curation CDS 714802 716195 . + 2 Parent=GSCOCT00011024001 | |
| 723 chr1 manual_curation CDS 716307 717032 . + 1 Parent=GSCOCT00011024001 | |
| 724 chr1 manual_curation CDS 717267 717493 . + 1 Parent=GSCOCT00011024001 | |
| 725 chr1 manual_curation gene 718549 719124 . + . ID=GSCOCG00011025001;Name=Cc01_g00480 | |
| 726 chr1 manual_curation mRNA 718549 719124 . + . ID=GSCOCT00011025001;Parent=GSCOCG00011025001;Name=Cc01_g00480 | |
| 727 chr1 manual_curation polypeptide 718549 719124 . + . ID=GSCOCP00011025001;Derives_from=GSCOCT00011025001;Name=Cc01_g00480;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011025001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(113261..113391%2C113800..113836);owner=coffea | |
| 728 chr1 manual_curation exon 718549 718679 . + . Parent=GSCOCT00011025001 | |
| 729 chr1 manual_curation exon 719088 719124 . + . Parent=GSCOCT00011025001 | |
| 730 chr1 manual_curation CDS 718549 718679 . + 0 Parent=GSCOCT00011025001 | |
| 731 chr1 manual_curation CDS 719088 719124 . + 2 Parent=GSCOCT00011025001 | |
| 732 chr1 manual_curation gene 720537 720983 . - . ID=GSCOCG00011026001;Name=Cc01_g00490 | |
| 733 chr1 manual_curation mRNA 720537 720983 . - . ID=GSCOCT00011026001;Parent=GSCOCG00011026001;Name=Cc01_g00490 | |
| 734 chr1 manual_curation polypeptide 720537 720983 . - . ID=GSCOCP00011026001;Dbxref=InterPro:IPR005299,PFAM:PF03492,SwissProt:A4GE69,SwissProt:Q9AVJ9,SwissProt:Q9AVK0,TAIR:AT3G11480.1,TAIR:AT5G04370.2,TAIR:AT5G38020.1,TrEMBL:Q4U5S1,TrEMBL:Q7FRH9,TrEMBL:Q8RVM1;Derives_from=GSCOCT00011026001;Name=Cc01_g00490;Ontology_term=CC_evidence_code:ISS,GO:0008168,CC_EC_number:missing_EC_number,PRODUCT:Putative Monomethylxanthine methyltransferase 1,CC_functional_completeness:fragment,CC_gene:MXMT1,CC_gene:XMT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011026001~ Putative Monomethylxanthine methyltransferase 1~ MXMT1~ fragment;original_location=complement(join(115684..115695%2C115249..115608));owner=coffea | |
| 735 chr1 manual_curation exon 720537 720896 . - . Parent=GSCOCT00011026001 | |
| 736 chr1 manual_curation exon 720972 720983 . - . Parent=GSCOCT00011026001 | |
| 737 chr1 manual_curation CDS 720537 720896 . - 0 Parent=GSCOCT00011026001 | |
| 738 chr1 manual_curation CDS 720972 720983 . - 0 Parent=GSCOCT00011026001 | |
| 739 chr1 manual_curation gene 756364 758227 . - . ID=GSCOCG00011029001;Name=Cc01_g00500 | |
| 740 chr1 manual_curation mRNA 756364 758227 . - . ID=GSCOCT00011029001;Parent=GSCOCG00011029001;Name=Cc01_g00500 | |
| 741 chr1 manual_curation polypeptide 756364 757898 . - . ID=GSCOCP00011029001;Dbxref=InterPro:IPR005484,PFAM:PF00861,SwissProt:P04453,SwissProt:Q8SAY0,SwissProt:Q9SX68,TAIR:AT1G14205.1,TAIR:AT1G48350.1,TrEMBL:B9S8X7,TrEMBL:F4HUG8,TrEMBL:F6H952;Derives_from=GSCOCT00011029001;Name=Cc01_g00500;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:Putative 50S ribosomal protein L18,CC_functional_completeness:modules,CC_gene:RPL18,CC_gene:rplR;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011029001~ Putative 50S ribosomal protein L18~ RPL18~ modules;original_location=complement(join(152493..152610%2C151847..151929%2C151462..151614%2C151076..151231));owner=coffea | |
| 742 chr1 manual_curation exon 758031 758227 . - . Parent=GSCOCT00011029001 | |
| 743 chr1 manual_curation exon 756364 756519 . - . Parent=GSCOCT00011029001 | |
| 744 chr1 manual_curation exon 756750 756902 . - . Parent=GSCOCT00011029001 | |
| 745 chr1 manual_curation exon 757135 757217 . - . Parent=GSCOCT00011029001 | |
| 746 chr1 manual_curation exon 757781 757945 . - . Parent=GSCOCT00011029001 | |
| 747 chr1 manual_curation CDS 756364 756519 . - 0 Parent=GSCOCT00011029001 | |
| 748 chr1 manual_curation CDS 756750 756902 . - 0 Parent=GSCOCT00011029001 | |
| 749 chr1 manual_curation CDS 757135 757217 . - 1 Parent=GSCOCT00011029001 | |
| 750 chr1 manual_curation CDS 757781 757898 . - 0 Parent=GSCOCT00011029001 | |
| 751 chr1 manual_curation gene 763151 763605 . - . ID=GSCOCG00011030001;Name=Cc01_g00510 | |
| 752 chr1 manual_curation mRNA 763151 763605 . - . ID=GSCOCT00011030001;Parent=GSCOCG00011030001;Name=Cc01_g00510 | |
| 753 chr1 manual_curation polypeptide 763151 763605 . - . ID=GSCOCP00011030001;Dbxref=InterPro:IPR005299,PFAM:PF03492,SwissProt:Q8H0G0,SwissProt:Q9AVK1,SwissProt:Q9AVL9,TAIR:AT1G19640.1,TAIR:AT1G68040.1,TAIR:AT4G36470.1,TrEMBL:G9BZJ8,TrEMBL:Q6US91,TrEMBL:Q8RVM1;Derives_from=GSCOCT00011030001;Name=Cc01_g00510;Ontology_term=CC_evidence_code:ISS,GO:0008168,CC_EC_number:2.1.1.141,PRODUCT:Putative Probable caffeine synthase 3,CC_functional_completeness:fragment,CC_gene:CS3,CC_gene:CTS2,CC_gene:CS4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011030001~ Putative Probable caffeine synthase 3~ CS3~ fragment;original_location=complement(join(158243..158317%2C157863..158111));owner=coffea | |
| 754 chr1 manual_curation exon 763151 763399 . - . Parent=GSCOCT00011030001 | |
| 755 chr1 manual_curation exon 763531 763605 . - . Parent=GSCOCT00011030001 | |
| 756 chr1 manual_curation CDS 763151 763399 . - 0 Parent=GSCOCT00011030001 | |
| 757 chr1 manual_curation CDS 763531 763605 . - 0 Parent=GSCOCT00011030001 | |
| 758 chr1 manual_curation gene 764816 769019 . + . ID=GSCOCG00011031001;Name=Cc01_g00520 | |
| 759 chr1 manual_curation mRNA 764816 769019 . + . ID=GSCOCT00011031001;Parent=GSCOCG00011031001;Name=Cc01_g00520 | |
| 760 chr1 manual_curation polypeptide 765561 769019 . + . ID=GSCOCP00011031001;Dbxref=InterPro:IPR000767,InterPro:IPR001611,InterPro:IPR002182,PFAM:PF00560,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q7XA40,SwissProt:Q7XA42,SwissProt:Q7XBQ9,TAIR:AT1G59218.1,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TrEMBL:B9NBC0,TrEMBL:B9NED8,TrEMBL:Q19PN6;Derives_from=GSCOCT00011031001;Name=Cc01_g00520;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance protein RGA3,CC_functional_completeness:fragment,CC_gene:RGA3,CC_gene:RGA1,CC_gene:RGA2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011031001~ Putative disease resistance protein RGA3~ RGA3~ fragment;original_location=join(160273..161518%2C161615..162187%2C162221..162529%2C162788..163541%2C163626..163731);owner=coffea | |
| 761 chr1 manual_curation exon 764816 766806 . + . Parent=GSCOCT00011031001 | |
| 762 chr1 manual_curation exon 766903 767475 . + . Parent=GSCOCT00011031001 | |
| 763 chr1 manual_curation exon 767509 767817 . + . Parent=GSCOCT00011031001 | |
| 764 chr1 manual_curation exon 768076 768829 . + . Parent=GSCOCT00011031001 | |
| 765 chr1 manual_curation exon 768914 769019 . + . Parent=GSCOCT00011031001 | |
| 766 chr1 manual_curation CDS 765561 766806 . + 0 Parent=GSCOCT00011031001 | |
| 767 chr1 manual_curation CDS 766903 767475 . + 1 Parent=GSCOCT00011031001 | |
| 768 chr1 manual_curation CDS 767509 767817 . + 1 Parent=GSCOCT00011031001 | |
| 769 chr1 manual_curation CDS 768076 768829 . + 1 Parent=GSCOCT00011031001 | |
| 770 chr1 manual_curation CDS 768914 769019 . + 2 Parent=GSCOCT00011031001 | |
| 771 chr1 manual_curation gene 772357 773221 . + . ID=GSCOCG00011032001;Name=Cc01_g00530 | |
| 772 chr1 manual_curation mRNA 772357 773221 . + . ID=GSCOCT00011032001;Parent=GSCOCG00011032001;Name=Cc01_g00530 | |
| 773 chr1 manual_curation polypeptide 772357 772617 . + . ID=GSCOCP00011032001;Dbxref=InterPro:IPR013698,PFAM:PF08491,SwissProt:O48651,SwissProt:O65404,SwissProt:O65727,TAIR:AT1G58440.1,TAIR:AT2G22830.1,TAIR:AT4G37760.1,TrEMBL:C5WRR5,TrEMBL:I1KQU4;Derives_from=GSCOCT00011032001;Name=Cc01_g00530;Ontology_term=CC_evidence_code:ISS,GO:0004506,GO:0016021,GO:0050660,GO:0055114,CC_EC_number:1.14.99.7,PRODUCT:Squalene monooxygenase,CC_functional_completeness:fragment,CC_gene:SQP1%2C1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011032001~ Squalene monooxygenase~ SQP1%2C1~ fragment;original_location=167069..167329;owner=coffea | |
| 774 chr1 manual_curation exon 772357 773221 . + . Parent=GSCOCT00011032001 | |
| 775 chr1 manual_curation CDS 772357 772617 . + 0 Parent=GSCOCT00011032001 | |
| 776 chr1 manual_curation gene 774012 774615 . - . ID=GSCOCG00011033001;Name=Cc01_g00540 | |
| 777 chr1 manual_curation mRNA 774012 774615 . - . ID=GSCOCT00011033001;Parent=GSCOCG00011033001;Name=Cc01_g00540 | |
| 778 chr1 manual_curation polypeptide 774012 774615 . - . ID=GSCOCP00011033001;Dbxref=InterPro:IPR005299,PFAM:PF03492,SwissProt:Q8H0D2,SwissProt:Q9AVK1,SwissProt:Q9AVL9,TAIR:AT1G19640.1,TAIR:AT3G21950.1,TAIR:AT4G36470.1,TrEMBL:E5Q8J6,TrEMBL:E5Q8J7,TrEMBL:G9BZJ7;Derives_from=GSCOCT00011033001;Name=Cc01_g00540;Ontology_term=CC_evidence_code:ISS,GO:0008168,CC_EC_number:2.1.1.141,PRODUCT:Probable caffeine synthase 4,CC_functional_completeness:fragment,CC_gene:CS4,CC_gene:CS3,CC_gene:DXMT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011033001~ Probable caffeine synthase 4~ CS4~ fragment;original_location=complement(join(169259..169327%2C168724..169161));owner=coffea | |
| 779 chr1 manual_curation exon 774012 774449 . - . Parent=GSCOCT00011033001 | |
| 780 chr1 manual_curation exon 774547 774615 . - . Parent=GSCOCT00011033001 | |
| 781 chr1 manual_curation CDS 774012 774449 . - 0 Parent=GSCOCT00011033001 | |
| 782 chr1 manual_curation CDS 774547 774615 . - 0 Parent=GSCOCT00011033001 | |
| 783 chr1 manual_curation gene 785574 792382 . + . ID=GSCOCG00011035001;Name=Cc01_g00550 | |
| 784 chr1 manual_curation mRNA 785574 792382 . + . ID=GSCOCT00011035001;Parent=GSCOCG00011035001;Name=Cc01_g00550 | |
| 785 chr1 manual_curation polypeptide 785574 788738 . + . ID=GSCOCP00011035001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q7XA40,SwissProt:Q7XA42,SwissProt:Q7XBQ9,TAIR:AT3G07040.1,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TrEMBL:A5BFB1,TrEMBL:F6H8Z2,TrEMBL:Q7XKH0;Derives_from=GSCOCT00011035001;Name=Cc01_g00550;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative Disease resistance protein RGA2,CC_functional_completeness:complete,CC_gene:RGA2,CC_gene:RGA3,CC_gene:RGA1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011035001~ Putative Disease resistance protein RGA2~ RGA2~ complete;original_location=join(180286..181234%2C181670..182104%2C182174..182385%2C182716..183004%2C183095..183450);owner=coffea | |
| 786 chr1 manual_curation exon 789366 789446 . + . Parent=GSCOCT00011035001 | |
| 787 chr1 manual_curation exon 789568 789990 . + . Parent=GSCOCT00011035001 | |
| 788 chr1 manual_curation exon 790723 790832 . + . Parent=GSCOCT00011035001 | |
| 789 chr1 manual_curation exon 791100 791264 . + . Parent=GSCOCT00011035001 | |
| 790 chr1 manual_curation exon 792078 792130 . + . Parent=GSCOCT00011035001 | |
| 791 chr1 manual_curation exon 792209 792382 . + . Parent=GSCOCT00011035001 | |
| 792 chr1 manual_curation exon 785574 786522 . + . Parent=GSCOCT00011035001 | |
| 793 chr1 manual_curation exon 786958 787392 . + . Parent=GSCOCT00011035001 | |
| 794 chr1 manual_curation exon 787462 787673 . + . Parent=GSCOCT00011035001 | |
| 795 chr1 manual_curation exon 788004 788292 . + . Parent=GSCOCT00011035001 | |
| 796 chr1 manual_curation exon 788383 788746 . + . Parent=GSCOCT00011035001 | |
| 797 chr1 manual_curation CDS 785574 786522 . + 0 Parent=GSCOCT00011035001 | |
| 798 chr1 manual_curation CDS 786958 787392 . + 1 Parent=GSCOCT00011035001 | |
| 799 chr1 manual_curation CDS 787462 787673 . + 1 Parent=GSCOCT00011035001 | |
| 800 chr1 manual_curation CDS 788004 788292 . + 0 Parent=GSCOCT00011035001 | |
| 801 chr1 manual_curation CDS 788383 788738 . + 1 Parent=GSCOCT00011035001 | |
| 802 chr1 manual_curation gene 792664 795449 . - . ID=GSCOCG00011036001;Name=Cc01_g00560 | |
| 803 chr1 manual_curation mRNA 792664 795449 . - . ID=GSCOCT00011036001;Parent=GSCOCG00011036001;Name=Cc01_g00560 | |
| 804 chr1 manual_curation polypeptide 792664 793164 . - . ID=GSCOCP00011036001;Dbxref=InterPro:IPR005299,PFAM:PF03492,SwissProt:Q9AVK0,SwissProt:Q9AVK1,SwissProt:Q9AVL9,TAIR:AT1G19640.1,TAIR:AT2G14060.1,TAIR:AT3G21950.1,TrEMBL:E5Q8J7,TrEMBL:G9BZJ7,TrEMBL:Q8RVL9;Derives_from=GSCOCT00011036001;Name=Cc01_g00560;Ontology_term=CC_evidence_code:ISS,GO:0008168,CC_EC_number:2.1.1.141,PRODUCT:Probable caffeine synthase 4,CC_functional_completeness:fragment,CC_gene:CS4,CC_gene:CS3,CC_gene:XMT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011036001~ Probable caffeine synthase 4~ CS4~ fragment;original_location=complement(join(187808..187876%2C187376..187711));owner=coffea | |
| 805 chr1 manual_curation exon 795189 795449 . - . Parent=GSCOCT00011036001 | |
| 806 chr1 manual_curation exon 792664 792999 . - . Parent=GSCOCT00011036001 | |
| 807 chr1 manual_curation exon 793096 793185 . - . Parent=GSCOCT00011036001 | |
| 808 chr1 manual_curation CDS 792664 792999 . - 0 Parent=GSCOCT00011036001 | |
| 809 chr1 manual_curation CDS 793096 793164 . - 0 Parent=GSCOCT00011036001 | |
| 810 chr1 manual_curation gene 836237 839958 . + . ID=GSCOCG00011037001;Name=Cc01_g00570 | |
| 811 chr1 manual_curation mRNA 836237 839958 . + . ID=GSCOCT00011037001;Parent=GSCOCG00011037001;Name=Cc01_g00570 | |
| 812 chr1 manual_curation polypeptide 836237 839958 . + . ID=GSCOCP00011037001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q7XA39,SwissProt:Q7XA40,SwissProt:Q7XBQ9,TAIR:AT1G58390.1,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TrEMBL:B9NBB7,TrEMBL:B9NBC0,TrEMBL:B9NED8;Derives_from=GSCOCT00011037001;Name=Cc01_g00570;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance protein RGA3,CC_functional_completeness:complete,CC_gene:RGA3,CC_gene:RGA2,CC_gene:RGA4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011037001~ Putative disease resistance protein RGA3~ RGA3~ complete;original_location=join(230949..231360%2C231421..233343%2C233377..233620%2C233725..234670);owner=coffea | |
| 813 chr1 manual_curation exon 836237 836648 . + . Parent=GSCOCT00011037001 | |
| 814 chr1 manual_curation exon 836709 838631 . + . Parent=GSCOCT00011037001 | |
| 815 chr1 manual_curation exon 838665 838908 . + . Parent=GSCOCT00011037001 | |
| 816 chr1 manual_curation exon 839013 839958 . + . Parent=GSCOCT00011037001 | |
| 817 chr1 manual_curation CDS 836237 836648 . + 0 Parent=GSCOCT00011037001 | |
| 818 chr1 manual_curation CDS 836709 838631 . + 1 Parent=GSCOCT00011037001 | |
| 819 chr1 manual_curation CDS 838665 838908 . + 1 Parent=GSCOCT00011037001 | |
| 820 chr1 manual_curation CDS 839013 839958 . + 2 Parent=GSCOCT00011037001 | |
| 821 chr1 manual_curation gene 928708 930138 . + . ID=GSCOCG00011039001;Name=Cc01_g00580 | |
| 822 chr1 manual_curation mRNA 928708 930138 . + . ID=GSCOCT00011039001;Parent=GSCOCG00011039001;Name=Cc01_g00580 | |
| 823 chr1 manual_curation polypeptide 928708 928950 . + . ID=GSCOCP00011039001;Derives_from=GSCOCT00011039001;Name=Cc01_g00580;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011039001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=323420..323662;owner=coffea | |
| 824 chr1 manual_curation exon 928708 930138 . + . Parent=GSCOCT00011039001 | |
| 825 chr1 manual_curation CDS 928708 928950 . + 0 Parent=GSCOCT00011039001 | |
| 826 chr1 manual_curation gene 966267 968243 . + . ID=GSCOCG00011041001;Name=Cc01_g00590 | |
| 827 chr1 manual_curation mRNA 966267 968243 . + . ID=GSCOCT00011041001;Parent=GSCOCG00011041001;Name=Cc01_g00590 | |
| 828 chr1 manual_curation polypeptide 966267 968243 . + . ID=GSCOCP00011041001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q7XA40,SwissProt:Q7XA42,SwissProt:Q7XBQ9,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TAIR:AT3G46710.1,TrEMBL:B9NBB7,TrEMBL:B9NCH8,TrEMBL:Q19PN6;Derives_from=GSCOCT00011041001;Name=Cc01_g00590;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance protein RGA3,CC_functional_completeness:fragment,CC_gene:RGA3,CC_gene:RGA1,CC_gene:RGA2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011041001~ Putative disease resistance protein RGA3~ RGA3~ fragment;original_location=join(360979..361431%2C361483..362955);owner=coffea | |
| 829 chr1 manual_curation exon 966267 966719 . + . Parent=GSCOCT00011041001 | |
| 830 chr1 manual_curation exon 966771 968243 . + . Parent=GSCOCT00011041001 | |
| 831 chr1 manual_curation CDS 966267 966719 . + 0 Parent=GSCOCT00011041001 | |
| 832 chr1 manual_curation CDS 966771 968243 . + 0 Parent=GSCOCT00011041001 | |
| 833 chr1 manual_curation gene 984294 985692 . + . ID=GSCOCG00011044001;Name=Cc01_g00600 | |
| 834 chr1 manual_curation mRNA 984294 985692 . + . ID=GSCOCT00011044001;Parent=GSCOCG00011044001;Name=Cc01_g00600 | |
| 835 chr1 manual_curation polypeptide 984527 984796 . + . ID=GSCOCP00011044001;Derives_from=GSCOCT00011044001;Name=Cc01_g00600;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011044001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=379239..379508;owner=coffea | |
| 836 chr1 manual_curation exon 984294 985692 . + . Parent=GSCOCT00011044001 | |
| 837 chr1 manual_curation CDS 984527 984796 . + 0 Parent=GSCOCT00011044001 | |
| 838 chr1 manual_curation gene 986391 988311 . + . ID=GSCOCG00011045001;Name=Cc01_g00610 | |
| 839 chr1 manual_curation mRNA 986391 988311 . + . ID=GSCOCT00011045001;Parent=GSCOCG00011045001;Name=Cc01_g00610 | |
| 840 chr1 manual_curation polypeptide 986391 988311 . + . ID=GSCOCP00011045001;Dbxref=InterPro:IPR001611,PFAM:PF00560,SwissProt:Q7XA39,SwissProt:Q7XA40,SwissProt:Q7XBQ9,TAIR:AT2G14080.1,TAIR:AT3G14470.1,TAIR:AT3G25510.1,TrEMBL:B9MYT6,TrEMBL:B9NED8,TrEMBL:Q19PN6;Derives_from=GSCOCT00011045001;Name=Cc01_g00610;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative Cc-nbs-lrr resistance protein,CC_functional_completeness:fragment,CC_gene:RGA4,CC_gene:RGA3,CC_gene:RGA2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011045001~ Putative Cc-nbs-lrr resistance protein~ RGA4~ fragment;original_location=join(381103..381487%2C381652..382551%2C382587..383023);owner=coffea | |
| 841 chr1 manual_curation exon 986391 986775 . + . Parent=GSCOCT00011045001 | |
| 842 chr1 manual_curation exon 986940 987839 . + . Parent=GSCOCT00011045001 | |
| 843 chr1 manual_curation exon 987875 988311 . + . Parent=GSCOCT00011045001 | |
| 844 chr1 manual_curation CDS 986391 986775 . + 0 Parent=GSCOCT00011045001 | |
| 845 chr1 manual_curation CDS 986940 987839 . + 1 Parent=GSCOCT00011045001 | |
| 846 chr1 manual_curation CDS 987875 988311 . + 1 Parent=GSCOCT00011045001 | |
| 847 chr1 manual_curation gene 993739 997435 . - . ID=GSCOCG00011047001;Name=Cc01_g00620 | |
| 848 chr1 manual_curation mRNA 993739 997435 . - . ID=GSCOCT00011047001;Parent=GSCOCG00011047001;Name=Cc01_g00620 | |
| 849 chr1 manual_curation polypeptide 993739 997435 . - . ID=GSCOCP00011047001;Dbxref=InterPro:IPR000873,InterPro:IPR005299,PFAM:PF00501,PFAM:PF03492,SwissProt:A4GE69,SwissProt:Q9AVK0,SwissProt:Q9AVK1,TAIR:AT1G19640.1,TAIR:AT3G11480.1,TAIR:AT5G04370.2,TrEMBL:E5Q8J7,TrEMBL:Q84PP6,TrEMBL:Q8RVL9;Derives_from=GSCOCT00011047001;Name=Cc01_g00620;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,GO:0008168,CC_EC_number:2.1.1.141,PRODUCT:Putative 7-methylxanthosine synthase 1,CC_functional_completeness:modules,CC_gene:XMT1,CC_gene:CS3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011047001~ Putative 7-methylxanthosine synthase 1~ XMT1~ modules;original_location=complement(join(392100..392147%2C391760..392023%2C390049..390138%2C389559..389980%2C388893..389199%2C388451..388816));owner=coffea | |
| 850 chr1 manual_curation exon 993739 994104 . - . Parent=GSCOCT00011047001 | |
| 851 chr1 manual_curation exon 994181 994487 . - . Parent=GSCOCT00011047001 | |
| 852 chr1 manual_curation exon 994847 995268 . - . Parent=GSCOCT00011047001 | |
| 853 chr1 manual_curation exon 995337 995426 . - . Parent=GSCOCT00011047001 | |
| 854 chr1 manual_curation exon 997048 997311 . - . Parent=GSCOCT00011047001 | |
| 855 chr1 manual_curation exon 997388 997435 . - . Parent=GSCOCT00011047001 | |
| 856 chr1 manual_curation CDS 993739 994104 . - 0 Parent=GSCOCT00011047001 | |
| 857 chr1 manual_curation CDS 994181 994487 . - 2 Parent=GSCOCT00011047001 | |
| 858 chr1 manual_curation CDS 994847 995268 . - 0 Parent=GSCOCT00011047001 | |
| 859 chr1 manual_curation CDS 995337 995426 . - 0 Parent=GSCOCT00011047001 | |
| 860 chr1 manual_curation CDS 997048 997311 . - 0 Parent=GSCOCT00011047001 | |
| 861 chr1 manual_curation CDS 997388 997435 . - 0 Parent=GSCOCT00011047001 | |
| 862 chr1 manual_curation gene 1101782 1106658 . + . ID=GSCOCG00011049001;Name=Cc01_g00630 | |
| 863 chr1 manual_curation mRNA 1101782 1106658 . + . ID=GSCOCT00011049001;Parent=GSCOCG00011049001;Name=Cc01_g00630 | |
| 864 chr1 manual_curation polypeptide 1102003 1105754 . + . ID=GSCOCP00011049001;Dbxref=InterPro:IPR006751,PFAM:PF04658,SwissProt:Q6R1L1,SwissProt:Q9D3R9,SwissProt:Q9R1C0,TAIR:AT1G55300.2,TrEMBL:B9DG24,TrEMBL:D7KM83,TrEMBL:D7SLI3;Derives_from=GSCOCT00011049001;Name=Cc01_g00630;Ontology_term=CC_evidence_code:ISS,GO:0005669,GO:0006367,GO:0016251,CC_EC_number:missing_EC_number,PRODUCT:Putative Transcription initiation factor TFIID subunit 7,CC_functional_completeness:fragment,CC_gene:Taf7,CC_gene:Taf7l,CC_gene:TAF7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011049001~ Putative Transcription initiation factor TFIID subunit 7~ Taf7~ fragment;original_location=join(496715..496832%2C499563..499696%2C499790..499909%2C500362..500466);owner=coffea | |
| 865 chr1 manual_curation exon 1101782 1101819 . + . Parent=GSCOCT00011049001 | |
| 866 chr1 manual_curation exon 1102001 1102120 . + . Parent=GSCOCT00011049001 | |
| 867 chr1 manual_curation exon 1104851 1104984 . + . Parent=GSCOCT00011049001 | |
| 868 chr1 manual_curation exon 1105078 1105197 . + . Parent=GSCOCT00011049001 | |
| 869 chr1 manual_curation exon 1105650 1106658 . + . Parent=GSCOCT00011049001 | |
| 870 chr1 manual_curation CDS 1102003 1102120 . + 0 Parent=GSCOCT00011049001 | |
| 871 chr1 manual_curation CDS 1104851 1104984 . + 1 Parent=GSCOCT00011049001 | |
| 872 chr1 manual_curation CDS 1105078 1105197 . + 0 Parent=GSCOCT00011049001 | |
| 873 chr1 manual_curation CDS 1105650 1105754 . + 0 Parent=GSCOCT00011049001 | |
| 874 chr1 manual_curation gene 1123809 1126217 . + . ID=GSCOCG00011050001;Name=Cc01_g00640 | |
| 875 chr1 manual_curation mRNA 1123809 1126217 . + . ID=GSCOCT00011050001;Parent=GSCOCG00011050001;Name=Cc01_g00640 | |
| 876 chr1 manual_curation polypeptide 1123809 1126217 . + . ID=GSCOCP00011050001;Dbxref=TAIR:AT2G26190.1,TAIR:AT3G13600.1,TAIR:AT3G58480.1,TrEMBL:F6GUK4,TrEMBL:I1K3X1,TrEMBL:Q9LHN9;Derives_from=GSCOCT00011050001;Name=Cc01_g00640;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:calmodulin-binding family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011050001~ calmodulin-binding family protein~ unknown_gene~ complete;original_location=join(518521..518909%2C519025..519205%2C519303..519391%2C519481..519571%2C519679..519915%2C520037..520138%2C520243..520929);owner=coffea | |
| 877 chr1 manual_curation exon 1123809 1124197 . + . Parent=GSCOCT00011050001 | |
| 878 chr1 manual_curation exon 1124313 1124493 . + . Parent=GSCOCT00011050001 | |
| 879 chr1 manual_curation exon 1124591 1124679 . + . Parent=GSCOCT00011050001 | |
| 880 chr1 manual_curation exon 1124769 1124859 . + . Parent=GSCOCT00011050001 | |
| 881 chr1 manual_curation exon 1124967 1125203 . + . Parent=GSCOCT00011050001 | |
| 882 chr1 manual_curation exon 1125325 1125426 . + . Parent=GSCOCT00011050001 | |
| 883 chr1 manual_curation exon 1125531 1126217 . + . Parent=GSCOCT00011050001 | |
| 884 chr1 manual_curation CDS 1123809 1124197 . + 0 Parent=GSCOCT00011050001 | |
| 885 chr1 manual_curation CDS 1124313 1124493 . + 2 Parent=GSCOCT00011050001 | |
| 886 chr1 manual_curation CDS 1124591 1124679 . + 0 Parent=GSCOCT00011050001 | |
| 887 chr1 manual_curation CDS 1124769 1124859 . + 2 Parent=GSCOCT00011050001 | |
| 888 chr1 manual_curation CDS 1124967 1125203 . + 0 Parent=GSCOCT00011050001 | |
| 889 chr1 manual_curation CDS 1125325 1125426 . + 0 Parent=GSCOCT00011050001 | |
| 890 chr1 manual_curation CDS 1125531 1126217 . + 0 Parent=GSCOCT00011050001 | |
| 891 chr1 manual_curation gene 1140011 1142949 . + . ID=GSCOCG00011051001;Name=Cc01_g00650 | |
| 892 chr1 manual_curation mRNA 1140011 1142949 . + . ID=GSCOCT00011051001;Parent=GSCOCG00011051001;Name=Cc01_g00650 | |
| 893 chr1 manual_curation polypeptide 1140214 1142646 . + . ID=GSCOCP00011051001;Dbxref=InterPro:IPR000719,InterPro:IPR000858,InterPro:IPR001245,InterPro:IPR001480,InterPro:IPR002290,InterPro:IPR003609,InterPro:IPR011009,InterPro:IPR020635,PFAM:PF00954,PFAM:PF01453,PFAM:PF07714,PROFILE:PS50011,PROFILE:PS50927,PROFILE:PS50948,SMART:SM00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF51110,SUPERFAMILY:SSF56112,SwissProt:P93756,SwissProt:Q9FLV4,SwissProt:Q9XID3,TAIR:AT1G34300.1,TAIR:AT2G41890.1,TAIR:AT4G32300.1,TrEMBL:B9H9X2,TrEMBL:E6YCZ1,TrEMBL:E6YCZ6;Derives_from=GSCOCT00011051001;Name=Cc01_g00650;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0005529,GO:0006468,GO:0048544,CC_EC_number:2.7.10.2,PRODUCT:Putative G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1,CC_functional_completeness:complete,CC_gene:SD31,CC_gene:At1g34300,CC_gene:At5g24080;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011051001~ Putative G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1~ SD31~ complete;original_location=534926..537358;owner=coffea | |
| 894 chr1 manual_curation exon 1140011 1142949 . + . Parent=GSCOCT00011051001 | |
| 895 chr1 manual_curation CDS 1140214 1142646 . + 0 Parent=GSCOCT00011051001 | |
| 896 chr1 manual_curation gene 1145424 1149014 . - . ID=GSCOCG00011052001;Name=Cc01_g00660 | |
| 897 chr1 manual_curation mRNA 1145424 1149014 . - . ID=GSCOCT00011052001;Parent=GSCOCG00011052001;Name=Cc01_g00660 | |
| 898 chr1 manual_curation polypeptide 1145424 1149014 . - . ID=GSCOCP00011052001;Dbxref=InterPro:IPR000719,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017442,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00108,SUPERFAMILY:SSF56112,SwissProt:P27450,SwissProt:P43293,SwissProt:Q8GXZ3,TAIR:AT1G76360.1,TAIR:AT2G17220.1,TAIR:AT4G35600.2,TrEMBL:B9R8N8,TrEMBL:I1JSV0,TrEMBL:I1K7C7;Derives_from=GSCOCT00011052001;Name=Cc01_g00660;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:At4g35600,CC_gene:NAK,CC_gene:At5g01020;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011052001~ Hypothetical protein~ At4g35600~ missing_functional_completeness;original_location=complement(join(543669..543726%2C542943..543037%2C540621..540697%2C540251..540281%2C540136..540201));owner=coffea | |
| 899 chr1 manual_curation exon 1145424 1145489 . - . Parent=GSCOCT00011052001 | |
| 900 chr1 manual_curation exon 1145539 1145569 . - . Parent=GSCOCT00011052001 | |
| 901 chr1 manual_curation exon 1145909 1145985 . - . Parent=GSCOCT00011052001 | |
| 902 chr1 manual_curation exon 1148231 1148325 . - . Parent=GSCOCT00011052001 | |
| 903 chr1 manual_curation exon 1148957 1149014 . - . Parent=GSCOCT00011052001 | |
| 904 chr1 manual_curation CDS 1145424 1145489 . - 0 Parent=GSCOCT00011052001 | |
| 905 chr1 manual_curation CDS 1145539 1145569 . - 2 Parent=GSCOCT00011052001 | |
| 906 chr1 manual_curation CDS 1145909 1145985 . - 0 Parent=GSCOCT00011052001 | |
| 907 chr1 manual_curation CDS 1148231 1148325 . - 1 Parent=GSCOCT00011052001 | |
| 908 chr1 manual_curation CDS 1148957 1149014 . - 0 Parent=GSCOCT00011052001 | |
| 909 chr1 manual_curation gene 1151065 1157107 . + . ID=GSCOCG00011053001;Name=Cc01_g00670 | |
| 910 chr1 manual_curation mRNA 1151065 1157107 . + . ID=GSCOCT00011053001;Parent=GSCOCG00011053001;Name=Cc01_g00670 | |
| 911 chr1 manual_curation polypeptide 1151596 1156929 . + . ID=GSCOCP00011053001;Dbxref=GENE3D:G3DSA:2.102.10.10,InterPro:IPR013626,InterPro:IPR017941,PFAM:PF00355,PFAM:PF08417,PROFILE:PS51296,SUPERFAMILY:SSF50022,SwissProt:O49931,SwissProt:Q8W496,SwissProt:Q9FYC2,TAIR:AT2G24820.1,TAIR:AT3G44880.1,TAIR:AT4G25650.2,TrEMBL:B9T573,TrEMBL:F6GUK7,TrEMBL:G7LIM7;Derives_from=GSCOCT00011053001;Name=Cc01_g00670;Ontology_term=CC_evidence_code:ISS,GO:0010277,GO:0016491,GO:0055114,CC_EC_number:1.14.13.82,CC_EC_number:1.14.13.82,PRODUCT:Protochlorophyllide-dependent translocon component 52%2C chloroplastic,CC_functional_completeness:complete,CC_gene:PTC52,CC_gene:PAO,CC_gene:TIC55;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011053001~ Protochlorophyllide-dependent translocon component 52%2C chloroplastic~ PTC52~ complete;original_location=join(546308..546559%2C548414..548601%2C549014..549058%2C549179..549392%2C549550..549747%2C550631..550818%2C551386..551641);owner=coffea | |
| 912 chr1 manual_curation exon 1151065 1151847 . + . Parent=GSCOCT00011053001 | |
| 913 chr1 manual_curation exon 1153702 1153889 . + . Parent=GSCOCT00011053001 | |
| 914 chr1 manual_curation exon 1154302 1154346 . + . Parent=GSCOCT00011053001 | |
| 915 chr1 manual_curation exon 1154467 1154680 . + . Parent=GSCOCT00011053001 | |
| 916 chr1 manual_curation exon 1154838 1155035 . + . Parent=GSCOCT00011053001 | |
| 917 chr1 manual_curation exon 1155919 1156106 . + . Parent=GSCOCT00011053001 | |
| 918 chr1 manual_curation exon 1156674 1157107 . + . Parent=GSCOCT00011053001 | |
| 919 chr1 manual_curation CDS 1151596 1151847 . + 0 Parent=GSCOCT00011053001 | |
| 920 chr1 manual_curation CDS 1153702 1153889 . + 0 Parent=GSCOCT00011053001 | |
| 921 chr1 manual_curation CDS 1154302 1154346 . + 2 Parent=GSCOCT00011053001 | |
| 922 chr1 manual_curation CDS 1154467 1154680 . + 2 Parent=GSCOCT00011053001 | |
| 923 chr1 manual_curation CDS 1154838 1155035 . + 0 Parent=GSCOCT00011053001 | |
| 924 chr1 manual_curation CDS 1155919 1156106 . + 0 Parent=GSCOCT00011053001 | |
| 925 chr1 manual_curation CDS 1156674 1156929 . + 2 Parent=GSCOCT00011053001 | |
| 926 chr1 manual_curation gene 1165577 1165995 . - . ID=GSCOCG00011054001;Name=Cc01_g00680 | |
| 927 chr1 manual_curation mRNA 1165577 1165995 . - . ID=GSCOCT00011054001;Parent=GSCOCG00011054001;Name=Cc01_g00680 | |
| 928 chr1 manual_curation polypeptide 1165577 1165723 . - . ID=GSCOCP00011054001;Derives_from=GSCOCT00011054001;Name=Cc01_g00680;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011054001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(560289..560435);owner=coffea | |
| 929 chr1 manual_curation exon 1165577 1165995 . - . Parent=GSCOCT00011054001 | |
| 930 chr1 manual_curation CDS 1165577 1165723 . - 0 Parent=GSCOCT00011054001 | |
| 931 chr1 manual_curation gene 1166187 1166906 . + . ID=GSCOCG00011055001;Name=Cc01_g00690 | |
| 932 chr1 manual_curation mRNA 1166187 1166906 . + . ID=GSCOCT00011055001;Parent=GSCOCG00011055001;Name=Cc01_g00690 | |
| 933 chr1 manual_curation polypeptide 1166187 1166906 . + . ID=GSCOCP00011055001;Dbxref=TAIR:AT2G04280.1,TAIR:AT4G08810.1,TAIR:AT4G12700.1,TrEMBL:A5AYT0,TrEMBL:B9SM64,TrEMBL:F6GUK8;Derives_from=GSCOCT00011055001;Name=Cc01_g00690;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:calcium ion binding,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011055001~ calcium ion binding~ unknown_gene~ fragment;original_location=560899..561618;owner=coffea | |
| 934 chr1 manual_curation exon 1166187 1166906 . + . Parent=GSCOCT00011055001 | |
| 935 chr1 manual_curation CDS 1166187 1166906 . + 0 Parent=GSCOCT00011055001 | |
| 936 chr1 manual_curation gene 1166975 1168791 . + . ID=GSCOCG00011056001;Name=Cc01_g00700 | |
| 937 chr1 manual_curation mRNA 1166975 1168791 . + . ID=GSCOCT00011056001;Parent=GSCOCG00011056001;Name=Cc01_g00700 | |
| 938 chr1 manual_curation polypeptide 1166975 1167847 . + . ID=GSCOCP00011056001;Dbxref=TAIR:AT2G04280.1,TAIR:AT4G08810.1,TAIR:AT4G12700.1,TrEMBL:A5AYT0,TrEMBL:F6GUK8,TrEMBL:I1K3W7;Derives_from=GSCOCT00011056001;Name=Cc01_g00700;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:calcium ion binding,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011056001~ calcium ion binding~ unknown_gene~ fragment;original_location=561687..562559;owner=coffea | |
| 939 chr1 manual_curation exon 1168319 1168791 . + . Parent=GSCOCT00011056001 | |
| 940 chr1 manual_curation exon 1166975 1167886 . + . Parent=GSCOCT00011056001 | |
| 941 chr1 manual_curation CDS 1166975 1167847 . + 0 Parent=GSCOCT00011056001 | |
| 942 chr1 manual_curation gene 1179686 1180063 . + . ID=GSCOCG00011057001;Name=Cc01_g00710 | |
| 943 chr1 manual_curation mRNA 1179686 1180063 . + . ID=GSCOCT00011057001;Parent=GSCOCG00011057001;Name=Cc01_g00710 | |
| 944 chr1 manual_curation polypeptide 1179686 1180063 . + . ID=GSCOCP00011057001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:P93011,SwissProt:Q9SS60,SwissProt:Q9STE1,TAIR:AT2G33760.1,TAIR:AT3G03580.1,TAIR:AT4G21300.1,TIGRFAMs:TIGR00756,TrEMBL:A5ADY4,TrEMBL:B9I0W9,TrEMBL:I1L253;Derives_from=GSCOCT00011057001;Name=Cc01_g00710;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Pentatricopeptide repeat-containing protein At4g21300,CC_functional_completeness:fragment,CC_gene:PCMP-E36,CC_gene:PCMP-H23,CC_gene:PCMP-H6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011057001~ Putative Pentatricopeptide repeat-containing protein At4g21300~ PCMP-E36~ fragment;original_location=574398..574775;owner=coffea | |
| 945 chr1 manual_curation exon 1179686 1180063 . + . Parent=GSCOCT00011057001 | |
| 946 chr1 manual_curation CDS 1179686 1180063 . + 0 Parent=GSCOCT00011057001 | |
| 947 chr1 manual_curation gene 1210274 1212695 . - . ID=GSCOCG00011062001;Name=Cc01_g00720 | |
| 948 chr1 manual_curation mRNA 1210274 1212695 . - . ID=GSCOCT00011062001;Parent=GSCOCG00011062001;Name=Cc01_g00720 | |
| 949 chr1 manual_curation polypeptide 1210494 1212499 . - . ID=GSCOCP00011062001;Dbxref=InterPro:IPR005299,PFAM:PF03492,SwissProt:A4GE70,SwissProt:Q8H0D2,SwissProt:Q8H0D3,TAIR:AT4G36470.1,TAIR:AT5G04370.2,TAIR:AT5G38020.1,TrEMBL:G9BZJ6,TrEMBL:G9BZJ8,TrEMBL:Q8RVL5;Derives_from=GSCOCT00011062001;Name=Cc01_g00720;Ontology_term=CC_evidence_code:ISS,GO:0008168,CC_EC_number:2.1.1.141,PRODUCT:3%2C7-dimethylxanthine N-methyltransferase,CC_functional_completeness:complete,CC_gene:DXMT1,CC_gene:CCS1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011062001~ 3%2C7-dimethylxanthine N-methyltransferase~ DXMT1~ complete;original_location=complement(join(607137..607211%2C606574..606990%2C606056..606316%2C605206..605607));owner=coffea | |
| 950 chr1 manual_curation exon 1210274 1210895 . - . Parent=GSCOCT00011062001 | |
| 951 chr1 manual_curation exon 1211344 1211604 . - . Parent=GSCOCT00011062001 | |
| 952 chr1 manual_curation exon 1211862 1212278 . - . Parent=GSCOCT00011062001 | |
| 953 chr1 manual_curation exon 1212425 1212695 . - . Parent=GSCOCT00011062001 | |
| 954 chr1 manual_curation CDS 1210494 1210895 . - 0 Parent=GSCOCT00011062001 | |
| 955 chr1 manual_curation CDS 1211344 1211604 . - 0 Parent=GSCOCT00011062001 | |
| 956 chr1 manual_curation CDS 1211862 1212278 . - 0 Parent=GSCOCT00011062001 | |
| 957 chr1 manual_curation CDS 1212425 1212499 . - 0 Parent=GSCOCT00011062001 | |
| 958 chr1 manual_curation gene 1241750 1245796 . + . ID=GSCOCG00011065001;Name=Cc01_g00730 | |
| 959 chr1 manual_curation mRNA 1241750 1245796 . + . ID=GSCOCT00011065001;Parent=GSCOCG00011065001;Name=Cc01_g00730 | |
| 960 chr1 manual_curation polypeptide 1242676 1245578 . + . ID=GSCOCP00011065001;Dbxref=GENE3D:G3DSA:2.102.10.10,InterPro:IPR017941,PFAM:PF00355,PROFILE:PS51296,SUPERFAMILY:SSF50022,SwissProt:O49931,SwissProt:Q8W496,SwissProt:Q9FYC2,TAIR:AT2G24820.1,TAIR:AT3G44880.1,TAIR:AT4G25650.2,TrEMBL:B9T573,TrEMBL:G7LIM2,TrEMBL:G7LIM7;Derives_from=GSCOCT00011065001;Name=Cc01_g00730;Ontology_term=CC_evidence_code:ISS,GO:0016491,GO:0055114,CC_EC_number:1.14.13.82,PRODUCT:Protochlorophyllide-dependent translocon component 52%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:PTC52,CC_gene:PAO,CC_gene:TIC55;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011065001~ Protochlorophyllide-dependent translocon component 52%2C chloroplastic~ PTC52~ fragment;original_location=join(637388..637744%2C639596..639783%2C640197..640290);owner=coffea | |
| 961 chr1 manual_curation exon 1241750 1243032 . + . Parent=GSCOCT00011065001 | |
| 962 chr1 manual_curation exon 1244884 1245071 . + . Parent=GSCOCT00011065001 | |
| 963 chr1 manual_curation exon 1245485 1245796 . + . Parent=GSCOCT00011065001 | |
| 964 chr1 manual_curation CDS 1242676 1243032 . + 0 Parent=GSCOCT00011065001 | |
| 965 chr1 manual_curation CDS 1244884 1245071 . + 0 Parent=GSCOCT00011065001 | |
| 966 chr1 manual_curation CDS 1245485 1245578 . + 2 Parent=GSCOCT00011065001 | |
| 967 chr1 manual_curation gene 1252369 1254735 . + . ID=GSCOCG00011068001;Name=Cc01_g00740 | |
| 968 chr1 manual_curation mRNA 1252369 1254735 . + . ID=GSCOCT00011068001;Parent=GSCOCG00011068001;Name=Cc01_g00740 | |
| 969 chr1 manual_curation polypeptide 1252812 1254473 . + . ID=GSCOCP00011068001;Dbxref=TAIR:AT2G04280.1,TAIR:AT4G08810.1,TAIR:AT4G12700.1,TrEMBL:A5AYT0,TrEMBL:B9SM64,TrEMBL:F6GUK8;Derives_from=GSCOCT00011068001;Name=Cc01_g00740;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:calcium ion binding,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011068001~ calcium ion binding~ unknown_gene~ complete;original_location=647524..649185;owner=coffea | |
| 970 chr1 manual_curation exon 1252369 1254735 . + . Parent=GSCOCT00011068001 | |
| 971 chr1 manual_curation CDS 1252812 1254473 . + 0 Parent=GSCOCT00011068001 | |
| 972 chr1 manual_curation gene 1255480 1257560 . - . ID=GSCOCG00011069001;Name=Cc01_g00750 | |
| 973 chr1 manual_curation mRNA 1255480 1257560 . - . ID=GSCOCT00011069001;Parent=GSCOCG00011069001;Name=Cc01_g00750 | |
| 974 chr1 manual_curation polypeptide 1255603 1256556 . - . ID=GSCOCP00011069001;Dbxref=InterPro:IPR005269,PFAM:PF03641,SwissProt:Q5TKP8,SwissProt:Q84MC2,SwissProt:Q8RUN2,TAIR:AT2G28305.1,TAIR:AT3G53450.1,TAIR:AT5G11950.1,TrEMBL:A5AYT1,TrEMBL:B9GFD4,TrEMBL:D7SLJ5;Derives_from=GSCOCT00011069001;Name=Cc01_g00750;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8,CC_functional_completeness:fragment,CC_gene:LOG8,CC_gene:LOG1,CC_gene:LOGL7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011069001~ Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8~ LOG8~ fragment;original_location=complement(join(651107..651268%2C650315..650392));owner=coffea | |
| 975 chr1 manual_curation exon 1255480 1255680 . - . Parent=GSCOCT00011069001 | |
| 976 chr1 manual_curation exon 1256395 1257560 . - . Parent=GSCOCT00011069001 | |
| 977 chr1 manual_curation CDS 1255603 1255680 . - 0 Parent=GSCOCT00011069001 | |
| 978 chr1 manual_curation CDS 1256395 1256556 . - 0 Parent=GSCOCT00011069001 | |
| 979 chr1 manual_curation gene 1261553 1262871 . - . ID=GSCOCG00011071001;Name=Cc01_g00760 | |
| 980 chr1 manual_curation mRNA 1261553 1262871 . - . ID=GSCOCT00011071001;Parent=GSCOCG00011071001;Name=Cc01_g00760 | |
| 981 chr1 manual_curation polypeptide 1261553 1262829 . - . ID=GSCOCP00011071001;Dbxref=InterPro:IPR005269,PFAM:PF03641,SwissProt:Q5TKP8,SwissProt:Q84MC2,SwissProt:Q8LR50,TAIR:AT3G53450.1,TAIR:AT4G35190.1,TAIR:AT5G11950.1,TIGRFAMs:TIGR00730,TrEMBL:B9GLF1,TrEMBL:B9GY77,TrEMBL:D7SLJ5;Derives_from=GSCOCT00011071001;Name=Cc01_g00760;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL1,CC_functional_completeness:fragment,CC_gene:LOGL1,CC_gene:LOGL7,CC_gene:LOG8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011071001~ Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL1~ LOGL1~ fragment;original_location=complement(join(657446..657541%2C657178..657275%2C656980..657010%2C656737..656836%2C656265..656377));owner=coffea | |
| 982 chr1 manual_curation exon 1261553 1261665 . - . Parent=GSCOCT00011071001 | |
| 983 chr1 manual_curation exon 1262025 1262124 . - . Parent=GSCOCT00011071001 | |
| 984 chr1 manual_curation exon 1262268 1262298 . - . Parent=GSCOCT00011071001 | |
| 985 chr1 manual_curation exon 1262466 1262563 . - . Parent=GSCOCT00011071001 | |
| 986 chr1 manual_curation exon 1262734 1262871 . - . Parent=GSCOCT00011071001 | |
| 987 chr1 manual_curation CDS 1261553 1261665 . - 1 Parent=GSCOCT00011071001 | |
| 988 chr1 manual_curation CDS 1262025 1262124 . - 0 Parent=GSCOCT00011071001 | |
| 989 chr1 manual_curation CDS 1262268 1262298 . - 2 Parent=GSCOCT00011071001 | |
| 990 chr1 manual_curation CDS 1262466 1262563 . - 0 Parent=GSCOCT00011071001 | |
| 991 chr1 manual_curation CDS 1262734 1262829 . - 0 Parent=GSCOCT00011071001 | |
| 992 chr1 manual_curation gene 1269798 1277241 . + . ID=GSCOCG00011072001;Name=Cc01_g00770 | |
| 993 chr1 manual_curation mRNA 1269798 1277241 . + . ID=GSCOCT00011072001;Parent=GSCOCG00011072001;Name=Cc01_g00770 | |
| 994 chr1 manual_curation polypeptide 1269798 1276137 . + . ID=GSCOCP00011072001;Derives_from=GSCOCT00011072001;Name=Cc01_g00770;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011072001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(664510..664817%2C670804..670849);owner=coffea | |
| 995 chr1 manual_curation exon 1269798 1270105 . + . Parent=GSCOCT00011072001 | |
| 996 chr1 manual_curation exon 1276092 1277241 . + . Parent=GSCOCT00011072001 | |
| 997 chr1 manual_curation CDS 1269798 1270105 . + 0 Parent=GSCOCT00011072001 | |
| 998 chr1 manual_curation CDS 1276092 1276137 . + 2 Parent=GSCOCT00011072001 | |
| 999 chr1 manual_curation gene 1277753 1279811 . + . ID=GSCOCG00011073001;Name=Cc01_g00780 | |
| 1000 chr1 manual_curation mRNA 1277753 1279811 . + . ID=GSCOCT00011073001;Parent=GSCOCG00011073001;Name=Cc01_g00780 | |
| 1001 chr1 manual_curation polypeptide 1277903 1279386 . + . ID=GSCOCP00011073001;Derives_from=GSCOCT00011073001;Name=Cc01_g00780;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011073001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(672615..672654%2C672753..672930%2C673135..673269%2C673327..673375%2C673922..674098);owner=coffea | |
| 1002 chr1 manual_curation exon 1277753 1277942 . + . Parent=GSCOCT00011073001 | |
| 1003 chr1 manual_curation exon 1278041 1278218 . + . Parent=GSCOCT00011073001 | |
| 1004 chr1 manual_curation exon 1278423 1278557 . + . Parent=GSCOCT00011073001 | |
| 1005 chr1 manual_curation exon 1278615 1278663 . + . Parent=GSCOCT00011073001 | |
| 1006 chr1 manual_curation exon 1279210 1279811 . + . Parent=GSCOCT00011073001 | |
| 1007 chr1 manual_curation CDS 1277903 1277942 . + 0 Parent=GSCOCT00011073001 | |
| 1008 chr1 manual_curation CDS 1278041 1278218 . + 1 Parent=GSCOCT00011073001 | |
| 1009 chr1 manual_curation CDS 1278423 1278557 . + 2 Parent=GSCOCT00011073001 | |
| 1010 chr1 manual_curation CDS 1278615 1278663 . + 2 Parent=GSCOCT00011073001 | |
| 1011 chr1 manual_curation CDS 1279210 1279386 . + 0 Parent=GSCOCT00011073001 | |
| 1012 chr1 manual_curation gene 1284401 1287736 . - . ID=GSCOCG00011074001;Name=Cc01_g00790 | |
| 1013 chr1 manual_curation mRNA 1284401 1287736 . - . ID=GSCOCT00011074001;Parent=GSCOCG00011074001;Name=Cc01_g00790 | |
| 1014 chr1 manual_curation polypeptide 1284723 1287736 . - . ID=GSCOCP00011074001;Dbxref=GENE3D:G3DSA:3.40.50.1470,InterPro:IPR001328,InterPro:IPR018171,PANTHER:PTHR17224,PFAM:PF01195,PROSITE:PS01196,SUPERFAMILY:SSF53178,SwissProt:Q5ZCL8,SwissProt:Q6NLS8,SwissProt:Q9M5P4,TAIR:AT5G16140.1,TAIR:AT5G19830.1,TAIR:AT5G38290.2,TrEMBL:B9T1E8,TrEMBL:C6TJQ3,TrEMBL:D7SLJ8;Derives_from=GSCOCT00011074001;Name=Cc01_g00790;Ontology_term=CC_evidence_code:ISS,GO:0004045,GO:0006412,CC_EC_number:3.1.1.29,PRODUCT:Peptidyl-tRNA hydrolase%2C mitochondrial,CC_functional_completeness:fragment,CC_gene:At5g19830,CC_gene:CRS2,CC_gene:Os01g0132800;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011074001~ Peptidyl-tRNA hydrolase%2C mitochondrial~ At5g19830~ fragment;original_location=complement(join(682433..682448%2C682331..682398%2C681616..681666%2C681463..681536%2C680163..680221%2C680014..680090%2C679435..679566));owner=coffea | |
| 1015 chr1 manual_curation exon 1284401 1284854 . - . Parent=GSCOCT00011074001 | |
| 1016 chr1 manual_curation exon 1285302 1285378 . - . Parent=GSCOCT00011074001 | |
| 1017 chr1 manual_curation exon 1285451 1285509 . - . Parent=GSCOCT00011074001 | |
| 1018 chr1 manual_curation exon 1286751 1286824 . - . Parent=GSCOCT00011074001 | |
| 1019 chr1 manual_curation exon 1286904 1286954 . - . Parent=GSCOCT00011074001 | |
| 1020 chr1 manual_curation exon 1287619 1287686 . - . Parent=GSCOCT00011074001 | |
| 1021 chr1 manual_curation exon 1287721 1287736 . - . Parent=GSCOCT00011074001 | |
| 1022 chr1 manual_curation CDS 1284723 1284854 . - 0 Parent=GSCOCT00011074001 | |
| 1023 chr1 manual_curation CDS 1285302 1285378 . - 1 Parent=GSCOCT00011074001 | |
| 1024 chr1 manual_curation CDS 1285451 1285509 . - 2 Parent=GSCOCT00011074001 | |
| 1025 chr1 manual_curation CDS 1286751 1286824 . - 0 Parent=GSCOCT00011074001 | |
| 1026 chr1 manual_curation CDS 1286904 1286954 . - 0 Parent=GSCOCT00011074001 | |
| 1027 chr1 manual_curation CDS 1287619 1287686 . - 1 Parent=GSCOCT00011074001 | |
| 1028 chr1 manual_curation CDS 1287721 1287736 . - 0 Parent=GSCOCT00011074001 | |
| 1029 chr1 manual_curation gene 1287798 1288993 . - . ID=GSCOCG00011075001;Name=Cc01_g00800 | |
| 1030 chr1 manual_curation mRNA 1287798 1288993 . - . ID=GSCOCT00011075001;Parent=GSCOCG00011075001;Name=Cc01_g00800 | |
| 1031 chr1 manual_curation polypeptide 1287798 1288090 . - . ID=GSCOCP00011075001;Dbxref=GENE3D:G3DSA:3.40.50.1470,InterPro:IPR001328,InterPro:IPR018171,PANTHER:PTHR17224,PFAM:PF01195,PROSITE:PS01195,SUPERFAMILY:SSF53178,SwissProt:Q5N9Q7,SwissProt:Q6NLS8,SwissProt:Q8GW64,TAIR:AT1G18440.1,TAIR:AT5G16140.1,TAIR:AT5G19830.1,TrEMBL:C6TJQ3,TrEMBL:D7SLJ8,TrEMBL:I1K3X2;Derives_from=GSCOCT00011075001;Name=Cc01_g00800;Ontology_term=CC_evidence_code:ISS,GO:0004045,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:Peptidyl-tRNA hydrolase%2C mitochondrial,CC_functional_completeness:fragment,CC_gene:At5g19830,CC_gene:At1g18440,CC_gene:Os01g0693900;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011075001~ Peptidyl-tRNA hydrolase%2C mitochondrial~ At5g19830~ fragment;original_location=complement(join(682695..682802%2C682510..682602));owner=coffea | |
| 1032 chr1 manual_curation exon 1288843 1288993 . - . Parent=GSCOCT00011075001 | |
| 1033 chr1 manual_curation exon 1287798 1287890 . - . Parent=GSCOCT00011075001 | |
| 1034 chr1 manual_curation exon 1287983 1288121 . - . Parent=GSCOCT00011075001 | |
| 1035 chr1 manual_curation CDS 1287798 1287890 . - 0 Parent=GSCOCT00011075001 | |
| 1036 chr1 manual_curation CDS 1287983 1288090 . - 0 Parent=GSCOCT00011075001 | |
| 1037 chr1 manual_curation gene 1291418 1295627 . + . ID=GSCOCG00011076001;Name=Cc01_g00810 | |
| 1038 chr1 manual_curation mRNA 1291418 1295627 . + . ID=GSCOCT00011076001;Parent=GSCOCG00011076001;Name=Cc01_g00810 | |
| 1039 chr1 manual_curation polypeptide 1291552 1294936 . + . ID=GSCOCP00011076001;Dbxref=InterPro:IPR003788,PFAM:PF02636,SwissProt:Q54S83,SwissProt:Q5BKM6,SwissProt:Q9VGR2,TAIR:AT3G28700.1,TrEMBL:B9RUL9,TrEMBL:D7LM24,TrEMBL:D7TX13;Derives_from=GSCOCT00011076001;Name=Cc01_g00810;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein midA%2C mitochondrial,CC_functional_completeness:complete,CC_gene:midA,CC_gene:CG17726,CC_gene:TEgg135j01.1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011076001~ Putative Protein midA%2C mitochondrial~ midA~ complete;original_location=join(686264..686504%2C686592..686797%2C686898..687008%2C687092..687281%2C687797..687855%2C688518..688570%2C688669..688891%2C689127..689235%2C689386..689648);owner=coffea | |
| 1040 chr1 manual_curation exon 1291418 1291792 . + . Parent=GSCOCT00011076001 | |
| 1041 chr1 manual_curation exon 1291880 1292085 . + . Parent=GSCOCT00011076001 | |
| 1042 chr1 manual_curation exon 1292186 1292296 . + . Parent=GSCOCT00011076001 | |
| 1043 chr1 manual_curation exon 1292380 1292569 . + . Parent=GSCOCT00011076001 | |
| 1044 chr1 manual_curation exon 1293085 1293143 . + . Parent=GSCOCT00011076001 | |
| 1045 chr1 manual_curation exon 1293806 1293858 . + . Parent=GSCOCT00011076001 | |
| 1046 chr1 manual_curation exon 1293957 1294179 . + . Parent=GSCOCT00011076001 | |
| 1047 chr1 manual_curation exon 1294415 1294523 . + . Parent=GSCOCT00011076001 | |
| 1048 chr1 manual_curation exon 1294674 1295627 . + . Parent=GSCOCT00011076001 | |
| 1049 chr1 manual_curation CDS 1291552 1291792 . + 0 Parent=GSCOCT00011076001 | |
| 1050 chr1 manual_curation CDS 1291880 1292085 . + 1 Parent=GSCOCT00011076001 | |
| 1051 chr1 manual_curation CDS 1292186 1292296 . + 0 Parent=GSCOCT00011076001 | |
| 1052 chr1 manual_curation CDS 1292380 1292569 . + 0 Parent=GSCOCT00011076001 | |
| 1053 chr1 manual_curation CDS 1293085 1293143 . + 1 Parent=GSCOCT00011076001 | |
| 1054 chr1 manual_curation CDS 1293806 1293858 . + 0 Parent=GSCOCT00011076001 | |
| 1055 chr1 manual_curation CDS 1293957 1294179 . + 2 Parent=GSCOCT00011076001 | |
| 1056 chr1 manual_curation CDS 1294415 1294523 . + 0 Parent=GSCOCT00011076001 | |
| 1057 chr1 manual_curation CDS 1294674 1294936 . + 1 Parent=GSCOCT00011076001 | |
| 1058 chr1 manual_curation gene 1299890 1308506 . + . ID=GSCOCG00011077001;Name=Cc01_g00820 | |
| 1059 chr1 manual_curation mRNA 1299890 1308506 . + . ID=GSCOCT00011077001;Parent=GSCOCG00011077001;Name=Cc01_g00820 | |
| 1060 chr1 manual_curation polypeptide 1299890 1308506 . + . ID=GSCOCP00011077001;Dbxref=GENE3D:G3DSA:1.25.10.10,InterPro:IPR000357,InterPro:IPR011989,InterPro:IPR016024,InterPro:IPR021133,PFAM:PF02985,PROFILE:PS50077,SUPERFAMILY:SSF48371,SwissProt:O00410,SwissProt:O60518,SwissProt:Q8BKC5,TAIR:AT2G16950.1,TAIR:AT4G27640.1,TAIR:AT5G19820.1,TrEMBL:B9GLE5,TrEMBL:B9GY72,TrEMBL:F6GUN0;Derives_from=GSCOCT00011077001;Name=Cc01_g00820;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:Putative Importin-5,CC_functional_completeness:complete,CC_gene:Ipo5,CC_gene:IPO5,CC_gene:RANBP6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011077001~ Putative Importin-5~ Ipo5~ complete;original_location=join(694602..694811%2C694956..695831%2C696240..696443%2C697064..697168%2C697269..697334%2C697426..697590%2C697881..697955%2C698042..698196%2C699368..699503%2C699591..699660%2C699796..699923%2C700021..700077%2C700744..700929%2C701028..701120%2C701812..701897%2C701985..702051%2C702223..702289%2C702395..702531%2C703114..703218);owner=coffea | |
| 1061 chr1 manual_curation exon 1299890 1300099 . + . Parent=GSCOCT00011077001 | |
| 1062 chr1 manual_curation exon 1300244 1301119 . + . Parent=GSCOCT00011077001 | |
| 1063 chr1 manual_curation exon 1301528 1301731 . + . Parent=GSCOCT00011077001 | |
| 1064 chr1 manual_curation exon 1302352 1302456 . + . Parent=GSCOCT00011077001 | |
| 1065 chr1 manual_curation exon 1302557 1302622 . + . Parent=GSCOCT00011077001 | |
| 1066 chr1 manual_curation exon 1302714 1302878 . + . Parent=GSCOCT00011077001 | |
| 1067 chr1 manual_curation exon 1303169 1303243 . + . Parent=GSCOCT00011077001 | |
| 1068 chr1 manual_curation exon 1303330 1303484 . + . Parent=GSCOCT00011077001 | |
| 1069 chr1 manual_curation exon 1304656 1304791 . + . Parent=GSCOCT00011077001 | |
| 1070 chr1 manual_curation exon 1304879 1304948 . + . Parent=GSCOCT00011077001 | |
| 1071 chr1 manual_curation exon 1305084 1305211 . + . Parent=GSCOCT00011077001 | |
| 1072 chr1 manual_curation exon 1305309 1305365 . + . Parent=GSCOCT00011077001 | |
| 1073 chr1 manual_curation exon 1306032 1306217 . + . Parent=GSCOCT00011077001 | |
| 1074 chr1 manual_curation exon 1306316 1306408 . + . Parent=GSCOCT00011077001 | |
| 1075 chr1 manual_curation exon 1307100 1307185 . + . Parent=GSCOCT00011077001 | |
| 1076 chr1 manual_curation exon 1307273 1307339 . + . Parent=GSCOCT00011077001 | |
| 1077 chr1 manual_curation exon 1307511 1307577 . + . Parent=GSCOCT00011077001 | |
| 1078 chr1 manual_curation exon 1307683 1307819 . + . Parent=GSCOCT00011077001 | |
| 1079 chr1 manual_curation exon 1308402 1308506 . + . Parent=GSCOCT00011077001 | |
| 1080 chr1 manual_curation CDS 1299890 1300099 . + 0 Parent=GSCOCT00011077001 | |
| 1081 chr1 manual_curation CDS 1300244 1301119 . + 0 Parent=GSCOCT00011077001 | |
| 1082 chr1 manual_curation CDS 1301528 1301731 . + 0 Parent=GSCOCT00011077001 | |
| 1083 chr1 manual_curation CDS 1302352 1302456 . + 0 Parent=GSCOCT00011077001 | |
| 1084 chr1 manual_curation CDS 1302557 1302622 . + 0 Parent=GSCOCT00011077001 | |
| 1085 chr1 manual_curation CDS 1302714 1302878 . + 0 Parent=GSCOCT00011077001 | |
| 1086 chr1 manual_curation CDS 1303169 1303243 . + 0 Parent=GSCOCT00011077001 | |
| 1087 chr1 manual_curation CDS 1303330 1303484 . + 0 Parent=GSCOCT00011077001 | |
| 1088 chr1 manual_curation CDS 1304656 1304791 . + 2 Parent=GSCOCT00011077001 | |
| 1089 chr1 manual_curation CDS 1304879 1304948 . + 0 Parent=GSCOCT00011077001 | |
| 1090 chr1 manual_curation CDS 1305084 1305211 . + 1 Parent=GSCOCT00011077001 | |
| 1091 chr1 manual_curation CDS 1305309 1305365 . + 0 Parent=GSCOCT00011077001 | |
| 1092 chr1 manual_curation CDS 1306032 1306217 . + 0 Parent=GSCOCT00011077001 | |
| 1093 chr1 manual_curation CDS 1306316 1306408 . + 0 Parent=GSCOCT00011077001 | |
| 1094 chr1 manual_curation CDS 1307100 1307185 . + 0 Parent=GSCOCT00011077001 | |
| 1095 chr1 manual_curation CDS 1307273 1307339 . + 2 Parent=GSCOCT00011077001 | |
| 1096 chr1 manual_curation CDS 1307511 1307577 . + 0 Parent=GSCOCT00011077001 | |
| 1097 chr1 manual_curation CDS 1307683 1307819 . + 1 Parent=GSCOCT00011077001 | |
| 1098 chr1 manual_curation CDS 1308402 1308506 . + 0 Parent=GSCOCT00011077001 | |
| 1099 chr1 manual_curation gene 1308585 1310171 . + . ID=GSCOCG00011078001;Name=Cc01_g00830 | |
| 1100 chr1 manual_curation mRNA 1308585 1310171 . + . ID=GSCOCT00011078001;Parent=GSCOCG00011078001;Name=Cc01_g00830 | |
| 1101 chr1 manual_curation polypeptide 1308585 1309772 . + . ID=GSCOCP00011078001;Dbxref=TAIR:AT5G19820.1,TrEMBL:A5XEM2;Derives_from=GSCOCT00011078001;Name=Cc01_g00830;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:ARM repeat superfamily protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011078001~ ARM repeat superfamily protein~ unknown_gene~ fragment;original_location=join(703297..703389%2C704320..704484);owner=coffea | |
| 1102 chr1 manual_curation exon 1308585 1308677 . + . Parent=GSCOCT00011078001 | |
| 1103 chr1 manual_curation exon 1309608 1310171 . + . Parent=GSCOCT00011078001 | |
| 1104 chr1 manual_curation CDS 1308585 1308677 . + 0 Parent=GSCOCT00011078001 | |
| 1105 chr1 manual_curation CDS 1309608 1309772 . + 0 Parent=GSCOCT00011078001 | |
| 1106 chr1 manual_curation gene 1314515 1315408 . + . ID=GSCOCG00011079001;Name=Cc01_g00840 | |
| 1107 chr1 manual_curation mRNA 1314515 1315408 . + . ID=GSCOCT00011079001;Parent=GSCOCG00011079001;Name=Cc01_g00840 | |
| 1108 chr1 manual_curation polypeptide 1314515 1315408 . + . ID=GSCOCP00011079001;Dbxref=GENE3D:G3DSA:3.30.730.10,InterPro:IPR001471,InterPro:IPR016177,PFAM:PF00847,PRINTS:PR00367,PROFILE:PS51032,SMART:SM00380,SUPERFAMILY:SSF54171,SwissProt:O82503,SwissProt:P93007,SwissProt:Q6J9S1,TAIR:AT2G33710.2,TAIR:AT4G11140.1,TAIR:AT5G19790.1,TrEMBL:B9GLE4,TrEMBL:B9GY71,TrEMBL:B9T1F0;Derives_from=GSCOCT00011079001;Name=Cc01_g00840;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,CC_EC_number:missing_EC_number,PRODUCT:DNA binding protein%2C putative,CC_functional_completeness:complete,CC_gene:RAP2-11,CC_gene:ERF112,CC_gene:CRF1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011079001~ DNA binding protein%2C putative~ RAP2-11~ complete;original_location=709227..710120;owner=coffea | |
| 1109 chr1 manual_curation exon 1314515 1315408 . + . Parent=GSCOCT00011079001 | |
| 1110 chr1 manual_curation CDS 1314515 1315408 . + 0 Parent=GSCOCT00011079001 | |
| 1111 chr1 manual_curation gene 1321556 1329576 . + . ID=GSCOCG00011080001;Name=Cc01_g00850 | |
| 1112 chr1 manual_curation mRNA 1321556 1329576 . + . ID=GSCOCT00011080001;Parent=GSCOCG00011080001;Name=Cc01_g00850 | |
| 1113 chr1 manual_curation polypeptide 1321658 1328287 . + . ID=GSCOCP00011080001;Dbxref=InterPro:IPR006476,PFAM:PF09713,TAIR:AT3G10250.1,TAIR:AT3G61700.2,TAIR:AT5G04090.2,TIGRFAMs:TIGR01589,TrEMBL:B9H947,TrEMBL:B9T2X0,TrEMBL:D7TIM9;Derives_from=GSCOCT00011080001;Name=Cc01_g00850;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Plant protein 1589 of unknown function,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011080001~ Putative Plant protein 1589 of unknown function~ unknown_gene~ complete;original_location=join(716370..716405%2C719047..719152%2C721259..721441%2C722150..722641%2C722797..722856%2C722938..722999);owner=coffea | |
| 1114 chr1 manual_curation exon 1328737 1328876 . + . Parent=GSCOCT00011080001 | |
| 1115 chr1 manual_curation exon 1329111 1329576 . + . Parent=GSCOCT00011080001 | |
| 1116 chr1 manual_curation exon 1321556 1321693 . + . Parent=GSCOCT00011080001 | |
| 1117 chr1 manual_curation exon 1324335 1324440 . + . Parent=GSCOCT00011080001 | |
| 1118 chr1 manual_curation exon 1326547 1326729 . + . Parent=GSCOCT00011080001 | |
| 1119 chr1 manual_curation exon 1327438 1327929 . + . Parent=GSCOCT00011080001 | |
| 1120 chr1 manual_curation exon 1328085 1328144 . + . Parent=GSCOCT00011080001 | |
| 1121 chr1 manual_curation exon 1328226 1328302 . + . Parent=GSCOCT00011080001 | |
| 1122 chr1 manual_curation CDS 1321658 1321693 . + 0 Parent=GSCOCT00011080001 | |
| 1123 chr1 manual_curation CDS 1324335 1324440 . + 0 Parent=GSCOCT00011080001 | |
| 1124 chr1 manual_curation CDS 1326547 1326729 . + 1 Parent=GSCOCT00011080001 | |
| 1125 chr1 manual_curation CDS 1327438 1327929 . + 1 Parent=GSCOCT00011080001 | |
| 1126 chr1 manual_curation CDS 1328085 1328144 . + 1 Parent=GSCOCT00011080001 | |
| 1127 chr1 manual_curation CDS 1328226 1328287 . + 1 Parent=GSCOCT00011080001 | |
| 1128 chr1 manual_curation gene 1330491 1334260 . - . ID=GSCOCG00011081001;Name=Cc01_g00860 | |
| 1129 chr1 manual_curation mRNA 1330491 1334260 . - . ID=GSCOCT00011081001;Parent=GSCOCG00011081001;Name=Cc01_g00860 | |
| 1130 chr1 manual_curation polypeptide 1330701 1334049 . - . ID=GSCOCP00011081001;Dbxref=GENE3D:G3DSA:3.30.1330.20,GENE3D:G3DSA:3.40.50.1440,InterPro:IPR000217,InterPro:IPR002452,InterPro:IPR003008,InterPro:IPR008280,InterPro:IPR013838,InterPro:IPR017975,InterPro:IPR018316,PANTHER:PTHR11588,PANTHER:PTHR11588:SF10,PFAM:PF00091,PFAM:PF03953,PRINTS:PR01161,PRINTS:PR01162,PROSITE:PS00227,PROSITE:PS00228,SMART:SM00864,SMART:SM00865,SUPERFAMILY:SSF52490,SUPERFAMILY:SSF55307,SwissProt:O22349,SwissProt:P20363,SwissProt:P28752,TAIR:AT1G64740.1,TAIR:AT5G19770.1,TAIR:AT5G19780.1,TrEMBL:F6GUN1,TrEMBL:I1QEI6,TrEMBL:Q0PVB0;Derives_from=GSCOCT00011081001;Name=Cc01_g00860;Ontology_term=CC_evidence_code:ISS,GO:0003924,GO:0005198,GO:0005525,GO:0005874,GO:0007017,GO:0007018,GO:0043234,GO:0051258,CC_EC_number:missing_EC_number,PRODUCT:Tubulin alpha-3 chain,CC_functional_completeness:complete,CC_gene:TUBA3,CC_gene:TUBA1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011081001~ Tubulin alpha-3 chain~ TUBA3~ complete;original_location=complement(join(728649..728761%2C727841..728055%2C727541..727740%2C726743..727251%2C725413..725725));owner=coffea | |
| 1131 chr1 manual_curation exon 1330491 1331013 . - . Parent=GSCOCT00011081001 | |
| 1132 chr1 manual_curation exon 1332031 1332539 . - . Parent=GSCOCT00011081001 | |
| 1133 chr1 manual_curation exon 1332829 1333028 . - . Parent=GSCOCT00011081001 | |
| 1134 chr1 manual_curation exon 1333129 1333343 . - . Parent=GSCOCT00011081001 | |
| 1135 chr1 manual_curation exon 1333937 1334260 . - . Parent=GSCOCT00011081001 | |
| 1136 chr1 manual_curation CDS 1330701 1331013 . - 2 Parent=GSCOCT00011081001 | |
| 1137 chr1 manual_curation CDS 1332031 1332539 . - 0 Parent=GSCOCT00011081001 | |
| 1138 chr1 manual_curation CDS 1332829 1333028 . - 1 Parent=GSCOCT00011081001 | |
| 1139 chr1 manual_curation CDS 1333129 1333343 . - 2 Parent=GSCOCT00011081001 | |
| 1140 chr1 manual_curation CDS 1333937 1334049 . - 0 Parent=GSCOCT00011081001 | |
| 1141 chr1 manual_curation gene 1349630 1350757 . + . ID=GSCOCG00011082001;Name=Cc01_g00870 | |
| 1142 chr1 manual_curation mRNA 1349630 1350757 . + . ID=GSCOCT00011082001;Parent=GSCOCG00011082001;Name=Cc01_g00870 | |
| 1143 chr1 manual_curation polypeptide 1349862 1350757 . + . ID=GSCOCP00011082001;Dbxref=InterPro:IPR001993,InterPro:IPR018108,PANTHER:PTHR11896,PFAM:PF00153,PROFILE:PS50920,SUPERFAMILY:SSF103506,TAIR:AT5G19760.1,TrEMBL:B9T1E7,TrEMBL:F6HLE5,TrEMBL:I1KSD7;Derives_from=GSCOCT00011082001;Name=Cc01_g00870;Ontology_term=CC_evidence_code:ISS,GO:0005488,GO:0006810,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011082001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(744574..744699%2C745227..745469);owner=coffea | |
| 1144 chr1 manual_curation exon 1349630 1349987 . + . Parent=GSCOCT00011082001 | |
| 1145 chr1 manual_curation exon 1350515 1350757 . + . Parent=GSCOCT00011082001 | |
| 1146 chr1 manual_curation CDS 1349862 1349987 . + 0 Parent=GSCOCT00011082001 | |
| 1147 chr1 manual_curation CDS 1350515 1350757 . + 0 Parent=GSCOCT00011082001 | |
| 1148 chr1 manual_curation gene 1400277 1400729 . + . ID=GSCOCG00038020001;Name=Cc01_g00880 | |
| 1149 chr1 manual_curation mRNA 1400277 1400729 . + . ID=GSCOCT00038020001;Parent=GSCOCG00038020001;Name=Cc01_g00880 | |
| 1150 chr1 manual_curation polypeptide 1400277 1400729 . + . ID=GSCOCP00038020001;Dbxref=GENE3D:G3DSA:2.60.210.10,InterPro:IPR004162,InterPro:IPR008974,InterPro:IPR013322,InterPro:IPR018121,PANTHER:PTHR10315,PFAM:PF03145,SUPERFAMILY:SSF49599,SwissProt:P93748,SwissProt:Q9M2P4,SwissProt:Q9STN8,TAIR:AT2G41980.1,TAIR:AT3G58040.1,TAIR:AT4G27880.1,TrEMBL:B9GYJ4,TrEMBL:I1NWW3,TrEMBL:Q6Z6Z3;Derives_from=GSCOCT00038020001;Name=Cc01_g00880;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0006511,GO:0007275,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:SINAT2,CC_gene:SINAT1,CC_gene:SINAT4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038020001~ Hypothetical protein~ SINAT2~ missing_functional_completeness;original_location=complement(1779977..1780429);owner=coffea | |
| 1151 chr1 manual_curation exon 1400277 1400729 . + . Parent=GSCOCT00038020001 | |
| 1152 chr1 manual_curation CDS 1400277 1400729 . + 0 Parent=GSCOCT00038020001 | |
| 1153 chr1 manual_curation gene 1410520 1411011 . + . ID=GSCOCG00038017001;Name=Cc01_g00890 | |
| 1154 chr1 manual_curation mRNA 1410520 1411011 . + . ID=GSCOCT00038017001;Parent=GSCOCG00038017001;Name=Cc01_g00890 | |
| 1155 chr1 manual_curation polypeptide 1410520 1411011 . + . ID=GSCOCP00038017001;Dbxref=GENE3D:G3DSA:2.60.210.10,InterPro:IPR004162,InterPro:IPR008974,InterPro:IPR013322,InterPro:IPR018121,PANTHER:PTHR10315,PFAM:PF03145,SUPERFAMILY:SSF49599,SwissProt:P93748,SwissProt:Q9M2P4,SwissProt:Q9STN8,TAIR:AT2G41980.1,TAIR:AT3G58040.1,TAIR:AT4G27880.1,TrEMBL:B9GYJ4,TrEMBL:I1NWW3,TrEMBL:Q6Z6Z3;Derives_from=GSCOCT00038017001;Name=Cc01_g00890;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0006511,GO:0007275,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:SINAT2,CC_gene:SINAT1,CC_gene:SINAT4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038017001~ Hypothetical protein~ SINAT2~ missing_functional_completeness;original_location=complement(1769695..1770186);owner=coffea | |
| 1156 chr1 manual_curation exon 1410520 1411011 . + . Parent=GSCOCT00038017001 | |
| 1157 chr1 manual_curation CDS 1410520 1411011 . + 0 Parent=GSCOCT00038017001 | |
| 1158 chr1 manual_curation gene 1426712 1427631 . - . ID=GSCOCG00038014001;Name=Cc01_g00900 | |
| 1159 chr1 manual_curation mRNA 1426712 1427631 . - . ID=GSCOCT00038014001;Parent=GSCOCG00038014001;Name=Cc01_g00900 | |
| 1160 chr1 manual_curation polypeptide 1426887 1427301 . - . ID=GSCOCP00038014001;Derives_from=GSCOCT00038014001;Name=Cc01_g00900;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038014001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(1753405..1753462%2C1753581..1753819);owner=coffea | |
| 1161 chr1 manual_curation exon 1427557 1427631 . - . Parent=GSCOCT00038014001 | |
| 1162 chr1 manual_curation exon 1427244 1427439 . - . Parent=GSCOCT00038014001 | |
| 1163 chr1 manual_curation exon 1426712 1427125 . - . Parent=GSCOCT00038014001 | |
| 1164 chr1 manual_curation CDS 1427244 1427301 . - 0 Parent=GSCOCT00038014001 | |
| 1165 chr1 manual_curation CDS 1426887 1427125 . - 1 Parent=GSCOCT00038014001 | |
| 1166 chr1 manual_curation gene 1431718 1433519 . - . ID=GSCOCG00038012001;Name=Cc01_g00910 | |
| 1167 chr1 manual_curation mRNA 1431718 1433519 . - . ID=GSCOCT00038012001;Parent=GSCOCG00038012001;Name=Cc01_g00910 | |
| 1168 chr1 manual_curation polypeptide 1431718 1433519 . - . ID=GSCOCP00038012001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q7XA40,SwissProt:Q7XA42,SwissProt:Q7XBQ9,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TAIR:AT3G50950.2,TrEMBL:B9NBB7,TrEMBL:D2Y392,TrEMBL:Q6TAF7;Derives_from=GSCOCT00038012001;Name=Cc01_g00910;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance protein RGA3,CC_functional_completeness:fragment,CC_gene:RGA3,CC_gene:RGA1,CC_gene:RGA2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038012001~ Putative disease resistance protein RGA3~ RGA3~ fragment;original_location=join(1747187..1747459%2C1747676..1748798%2C1748903..1748988);owner=coffea | |
| 1169 chr1 manual_curation exon 1433247 1433519 . - . Parent=GSCOCT00038012001 | |
| 1170 chr1 manual_curation exon 1431908 1433030 . - . Parent=GSCOCT00038012001 | |
| 1171 chr1 manual_curation exon 1431718 1431803 . - . Parent=GSCOCT00038012001 | |
| 1172 chr1 manual_curation CDS 1433247 1433519 . - 0 Parent=GSCOCT00038012001 | |
| 1173 chr1 manual_curation CDS 1431908 1433030 . - 0 Parent=GSCOCT00038012001 | |
| 1174 chr1 manual_curation CDS 1431718 1431803 . - 1 Parent=GSCOCT00038012001 | |
| 1175 chr1 manual_curation gene 1496095 1500079 . - . ID=GSCOCG00038010001;Name=Cc01_g00920 | |
| 1176 chr1 manual_curation mRNA 1496095 1500079 . - . ID=GSCOCT00038010001;Parent=GSCOCG00038010001;Name=Cc01_g00920 | |
| 1177 chr1 manual_curation polypeptide 1499270 1500079 . - . ID=GSCOCP00038010001;Dbxref=TAIR:AT1G69550.1,TrEMBL:B9NBB7,TrEMBL:B9NED8,TrEMBL:B9S468;Derives_from=GSCOCT00038010001;Name=Cc01_g00920;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance protein (TIR-NBS-LRR class),CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038010001~ Putative disease resistance protein (TIR-NBS-LRR class)~ unknown_gene~ fragment;original_location=1680627..1681436;owner=coffea | |
| 1178 chr1 manual_curation exon 1498846 1498876 . - . Parent=GSCOCT00038010001 | |
| 1179 chr1 manual_curation exon 1498295 1498528 . - . Parent=GSCOCT00038010001 | |
| 1180 chr1 manual_curation exon 1497991 1498173 . - . Parent=GSCOCT00038010001 | |
| 1181 chr1 manual_curation exon 1497135 1497319 . - . Parent=GSCOCT00038010001 | |
| 1182 chr1 manual_curation exon 1496095 1496200 . - . Parent=GSCOCT00038010001 | |
| 1183 chr1 manual_curation exon 1499231 1500079 . - . Parent=GSCOCT00038010001 | |
| 1184 chr1 manual_curation CDS 1499270 1500079 . - 0 Parent=GSCOCT00038010001 | |
| 1185 chr1 manual_curation gene 1500130 1500961 . - . ID=GSCOCG00038009001;Name=Cc01_g00930 | |
| 1186 chr1 manual_curation mRNA 1500130 1500961 . - . ID=GSCOCT00038009001;Parent=GSCOCG00038009001;Name=Cc01_g00930 | |
| 1187 chr1 manual_curation polypeptide 1500130 1500961 . - . ID=GSCOCP00038009001;Dbxref=SwissProt:Q7XA39,SwissProt:Q7XA40,SwissProt:Q7XBQ9,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TrEMBL:B9S468,TrEMBL:E0YA38,TrEMBL:E0YA41;Derives_from=GSCOCT00038009001;Name=Cc01_g00930;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Disease resistance protein RGA2,CC_functional_completeness:fragment,CC_gene:RGA2,CC_gene:RGA4,CC_gene:RGA3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038009001~ Putative Disease resistance protein RGA2~ RGA2~ fragment;original_location=join(1679745..1680219%2C1680307..1680455%2C1680547..1680576);owner=coffea | |
| 1188 chr1 manual_curation exon 1500487 1500961 . - . Parent=GSCOCT00038009001 | |
| 1189 chr1 manual_curation exon 1500251 1500399 . - . Parent=GSCOCT00038009001 | |
| 1190 chr1 manual_curation exon 1500130 1500159 . - . Parent=GSCOCT00038009001 | |
| 1191 chr1 manual_curation CDS 1500487 1500961 . - 0 Parent=GSCOCT00038009001 | |
| 1192 chr1 manual_curation CDS 1500251 1500399 . - 1 Parent=GSCOCT00038009001 | |
| 1193 chr1 manual_curation CDS 1500130 1500159 . - 0 Parent=GSCOCT00038009001 | |
| 1194 chr1 manual_curation gene 1526032 1530013 . - . ID=GSCOCG00038008001;Name=Cc01_g00940 | |
| 1195 chr1 manual_curation mRNA 1526032 1530013 . - . ID=GSCOCT00038008001;Parent=GSCOCG00038008001;Name=Cc01_g00940 | |
| 1196 chr1 manual_curation polypeptide 1527230 1528858 . - . ID=GSCOCP00038008001;Derives_from=GSCOCT00038008001;Name=Cc01_g00940;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038008001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(1651848..1651893%2C1653169..1653232%2C1653356..1653476);owner=coffea | |
| 1197 chr1 manual_curation exon 1526817 1527054 . - . Parent=GSCOCT00038008001 | |
| 1198 chr1 manual_curation exon 1526032 1526418 . - . Parent=GSCOCT00038008001 | |
| 1199 chr1 manual_curation exon 1528813 1530013 . - . Parent=GSCOCT00038008001 | |
| 1200 chr1 manual_curation exon 1527474 1527537 . - . Parent=GSCOCT00038008001 | |
| 1201 chr1 manual_curation exon 1527172 1527350 . - . Parent=GSCOCT00038008001 | |
| 1202 chr1 manual_curation CDS 1528813 1528858 . - 0 Parent=GSCOCT00038008001 | |
| 1203 chr1 manual_curation CDS 1527474 1527537 . - 1 Parent=GSCOCT00038008001 | |
| 1204 chr1 manual_curation CDS 1527230 1527350 . - 2 Parent=GSCOCT00038008001 | |
| 1205 chr1 manual_curation gene 1530068 1532450 . - . ID=GSCOCG00038007001;Name=Cc01_g00950 | |
| 1206 chr1 manual_curation mRNA 1530068 1532450 . - . ID=GSCOCT00038007001;Parent=GSCOCG00038007001;Name=Cc01_g00950 | |
| 1207 chr1 manual_curation polypeptide 1530068 1532450 . - . ID=GSCOCP00038007001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q7XA39,SwissProt:Q7XA40,SwissProt:Q7XA42,TAIR:AT3G07040.1,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TrEMBL:B9GZ62,TrEMBL:B9NBB7,TrEMBL:B9NBB9;Derives_from=GSCOCT00038007001;Name=Cc01_g00950;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance protein RGA3,CC_functional_completeness:fragment,CC_gene:RGA3,CC_gene:RGA4,CC_gene:RGA1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038007001~ Putative disease resistance protein RGA3~ RGA3~ fragment;original_location=join(1648256..1648595%2C1648716..1650494%2C1650553..1650638);owner=coffea | |
| 1208 chr1 manual_curation exon 1532111 1532450 . - . Parent=GSCOCT00038007001 | |
| 1209 chr1 manual_curation exon 1530212 1531990 . - . Parent=GSCOCT00038007001 | |
| 1210 chr1 manual_curation exon 1530068 1530153 . - . Parent=GSCOCT00038007001 | |
| 1211 chr1 manual_curation CDS 1532111 1532450 . - 0 Parent=GSCOCT00038007001 | |
| 1212 chr1 manual_curation CDS 1530212 1531990 . - 1 Parent=GSCOCT00038007001 | |
| 1213 chr1 manual_curation CDS 1530068 1530153 . - 1 Parent=GSCOCT00038007001 | |
| 1214 chr1 manual_curation gene 1538604 1543204 . + . ID=GSCOCG00038005001;Name=Cc01_g00960 | |
| 1215 chr1 manual_curation mRNA 1538604 1543204 . + . ID=GSCOCT00038005001;Parent=GSCOCG00038005001;Name=Cc01_g00960 | |
| 1216 chr1 manual_curation polypeptide 1538604 1542517 . + . ID=GSCOCP00038005001;Dbxref=SwissProt:P54453,SwissProt:Q66GP9,SwissProt:Q6YPG5,TAIR:AT3G47450.1,TAIR:AT3G57180.1,TAIR:AT4G10620.1,TrEMBL:D7LYR0,TrEMBL:F6GUF5,TrEMBL:G7JNJ0;Derives_from=GSCOCT00038005001;Name=Cc01_g00960;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized protein yqeH,CC_functional_completeness:modules,CC_gene:yqeH,CC_gene:NOS1,CC_gene:Os02g0104700;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038005001~ Putative Uncharacterized protein yqeH~ yqeH~ modules;original_location=complement(join(1640870..1642102%2C1639598..1639765%2C1638189..1638575));owner=coffea | |
| 1217 chr1 manual_curation exon 1542131 1543204 . + . Parent=GSCOCT00038005001 | |
| 1218 chr1 manual_curation exon 1540941 1541108 . + . Parent=GSCOCT00038005001 | |
| 1219 chr1 manual_curation exon 1538604 1539836 . + . Parent=GSCOCT00038005001 | |
| 1220 chr1 manual_curation CDS 1542131 1542517 . + 0 Parent=GSCOCT00038005001 | |
| 1221 chr1 manual_curation CDS 1540941 1541108 . + 0 Parent=GSCOCT00038005001 | |
| 1222 chr1 manual_curation CDS 1538604 1539836 . + 0 Parent=GSCOCT00038005001 | |
| 1223 chr1 manual_curation gene 1545293 1549181 . + . ID=GSCOCG00038004001;Name=Cc01_g00970 | |
| 1224 chr1 manual_curation mRNA 1545293 1549181 . + . ID=GSCOCT00038004001;Parent=GSCOCG00038004001;Name=Cc01_g00970 | |
| 1225 chr1 manual_curation polypeptide 1545710 1548963 . + . ID=GSCOCP00038004001;Dbxref=InterPro:IPR008545,PFAM:PF05701,SwissProt:F4I8B9,SwissProt:Q9LFE4,SwissProt:Q9M8T5,TAIR:AT1G65010.1,TAIR:AT3G02930.1,TAIR:AT5G16730.1,TrEMBL:B9I744,TrEMBL:B9S250,TrEMBL:F6HEE0;Derives_from=GSCOCT00038004001;Name=Cc01_g00970;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:WEB family protein At5g16730%2C chloroplastic,CC_functional_completeness:complete,CC_gene:At5g16730,CC_gene:At1g65010,CC_gene:At3g02930;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038004001~ WEB family protein At5g16730%2C chloroplastic~ At5g16730~ complete;original_location=complement(join(1634980..1634996%2C1634152..1634368%2C1631983..1634076%2C1631743..1631883));owner=coffea | |
| 1226 chr1 manual_curation exon 1548823 1549181 . + . Parent=GSCOCT00038004001 | |
| 1227 chr1 manual_curation exon 1546630 1548723 . + . Parent=GSCOCT00038004001 | |
| 1228 chr1 manual_curation exon 1546338 1546554 . + . Parent=GSCOCT00038004001 | |
| 1229 chr1 manual_curation exon 1545293 1545726 . + . Parent=GSCOCT00038004001 | |
| 1230 chr1 manual_curation CDS 1548823 1548963 . + 0 Parent=GSCOCT00038004001 | |
| 1231 chr1 manual_curation CDS 1546630 1548723 . + 0 Parent=GSCOCT00038004001 | |
| 1232 chr1 manual_curation CDS 1546338 1546554 . + 2 Parent=GSCOCT00038004001 | |
| 1233 chr1 manual_curation CDS 1545710 1545726 . + 0 Parent=GSCOCT00038004001 | |
| 1234 chr1 manual_curation gene 1565012 1570996 . + . ID=GSCOCG00038003001;Name=Cc01_g00980 | |
| 1235 chr1 manual_curation mRNA 1565012 1570996 . + . ID=GSCOCT00038003001;Parent=GSCOCG00038003001;Name=Cc01_g00980 | |
| 1236 chr1 manual_curation polypeptide 1565334 1570417 . + . ID=GSCOCP00038003001;Dbxref=InterPro:IPR002524,PANTHER:PTHR11562,PFAM:PF01545,SwissProt:Q10PP8,SwissProt:Q6Z7K5,SwissProt:Q9M2P2,TAIR:AT1G16310.1,TAIR:AT1G79520.2,TAIR:AT3G58060.1,TIGRFAMs:TIGR01297,TrEMBL:B9T072,TrEMBL:G7IV59,TrEMBL:Q84ND6;Derives_from=GSCOCT00038003001;Name=Cc01_g00980;Ontology_term=CC_evidence_code:ISS,GO:0006812,GO:0008324,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Metal tolerance protein 4,CC_functional_completeness:complete,CC_gene:MTP4,CC_gene:MTP3,CC_gene:MTPC3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038003001~ Metal tolerance protein 4~ MTP4~ complete;original_location=complement(join(1615153..1615372%2C1613664..1613833%2C1611867..1612065%2C1611426..1611604%2C1611196..1611346%2C1610583..1610713%2C1610289..1610468));owner=coffea | |
| 1237 chr1 manual_curation exon 1570238 1570996 . + . Parent=GSCOCT00038003001 | |
| 1238 chr1 manual_curation exon 1569993 1570123 . + . Parent=GSCOCT00038003001 | |
| 1239 chr1 manual_curation exon 1569360 1569510 . + . Parent=GSCOCT00038003001 | |
| 1240 chr1 manual_curation exon 1569102 1569280 . + . Parent=GSCOCT00038003001 | |
| 1241 chr1 manual_curation exon 1568641 1568839 . + . Parent=GSCOCT00038003001 | |
| 1242 chr1 manual_curation exon 1566873 1567042 . + . Parent=GSCOCT00038003001 | |
| 1243 chr1 manual_curation exon 1565012 1565553 . + . Parent=GSCOCT00038003001 | |
| 1244 chr1 manual_curation CDS 1570238 1570417 . + 0 Parent=GSCOCT00038003001 | |
| 1245 chr1 manual_curation CDS 1569993 1570123 . + 1 Parent=GSCOCT00038003001 | |
| 1246 chr1 manual_curation CDS 1569360 1569510 . + 0 Parent=GSCOCT00038003001 | |
| 1247 chr1 manual_curation CDS 1569102 1569280 . + 1 Parent=GSCOCT00038003001 | |
| 1248 chr1 manual_curation CDS 1568641 1568839 . + 0 Parent=GSCOCT00038003001 | |
| 1249 chr1 manual_curation CDS 1566873 1567042 . + 1 Parent=GSCOCT00038003001 | |
| 1250 chr1 manual_curation CDS 1565334 1565553 . + 0 Parent=GSCOCT00038003001 | |
| 1251 chr1 manual_curation gene 1573993 1578755 . - . ID=GSCOCG00038001001;Name=Cc01_g00990 | |
| 1252 chr1 manual_curation mRNA 1573993 1578755 . - . ID=GSCOCT00038001001;Parent=GSCOCG00038001001;Name=Cc01_g00990 | |
| 1253 chr1 manual_curation polypeptide 1574576 1578731 . - . ID=GSCOCP00038001001;Dbxref=GENE3D:G3DSA:2.10.230.10,InterPro:IPR001305,SUPERFAMILY:SSF57938,TAIR:AT2G34860.1,TrEMBL:B9GLJ5,TrEMBL:B9T070,TrEMBL:F6GUF6;Derives_from=GSCOCT00038001001;Name=Cc01_g00990;Ontology_term=CC_evidence_code:ISS,GO:0006457,GO:0031072,GO:0051082,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038001001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=join(1601975..1602068%2C1602523..1602617%2C1603258..1603423%2C1604653..1604745%2C1606000..1606130);owner=coffea | |
| 1254 chr1 manual_curation exon 1573993 1574360 . - . Parent=GSCOCT00038001001 | |
| 1255 chr1 manual_curation exon 1578638 1578755 . - . Parent=GSCOCT00038001001 | |
| 1256 chr1 manual_curation exon 1578089 1578183 . - . Parent=GSCOCT00038001001 | |
| 1257 chr1 manual_curation exon 1577283 1577448 . - . Parent=GSCOCT00038001001 | |
| 1258 chr1 manual_curation exon 1575961 1576053 . - . Parent=GSCOCT00038001001 | |
| 1259 chr1 manual_curation exon 1574576 1574706 . - . Parent=GSCOCT00038001001 | |
| 1260 chr1 manual_curation CDS 1578638 1578731 . - 0 Parent=GSCOCT00038001001 | |
| 1261 chr1 manual_curation CDS 1578089 1578183 . - 1 Parent=GSCOCT00038001001 | |
| 1262 chr1 manual_curation CDS 1577283 1577448 . - 0 Parent=GSCOCT00038001001 | |
| 1263 chr1 manual_curation CDS 1575961 1576053 . - 1 Parent=GSCOCT00038001001 | |
| 1264 chr1 manual_curation CDS 1574576 1574706 . - 1 Parent=GSCOCT00038001001 | |
| 1265 chr1 manual_curation gene 1583125 1589177 . - . ID=GSCOCG00038000001;Name=Cc01_g01000 | |
| 1266 chr1 manual_curation mRNA 1583125 1589177 . - . ID=GSCOCT00038000001;Parent=GSCOCG00038000001;Name=Cc01_g01000 | |
| 1267 chr1 manual_curation polypeptide 1587369 1589177 . - . ID=GSCOCP00038000001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:O23169,SwissProt:Q9SHZ8,SwissProt:Q9SKQ4,TAIR:AT2G21090.1,TAIR:AT2G22070.1,TAIR:AT4G37170.1,TIGRFAMs:TIGR00756,TrEMBL:B9SQL4,TrEMBL:D7LKZ8,TrEMBL:F6I116;Derives_from=GSCOCT00038000001;Name=Cc01_g01000;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At2g21090,CC_functional_completeness:complete,CC_gene:PCMP-E48,CC_gene:PCMP-H41,CC_gene:PCMP-H5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038000001~ Pentatricopeptide repeat-containing protein At2g21090~ PCMP-E48~ complete;original_location=1591529..1593337;owner=coffea | |
| 1268 chr1 manual_curation exon 1584627 1584752 . - . Parent=GSCOCT00038000001 | |
| 1269 chr1 manual_curation exon 1583125 1583773 . - . Parent=GSCOCT00038000001 | |
| 1270 chr1 manual_curation exon 1587310 1589177 . - . Parent=GSCOCT00038000001 | |
| 1271 chr1 manual_curation CDS 1587369 1589177 . - 0 Parent=GSCOCT00038000001 | |
| 1272 chr1 manual_curation gene 1590736 1597626 . - . ID=GSCOCG00037999001;Name=Cc01_g01010 | |
| 1273 chr1 manual_curation mRNA 1590736 1597626 . - . ID=GSCOCT00037999001;Parent=GSCOCG00037999001;Name=Cc01_g01010 | |
| 1274 chr1 manual_curation polypeptide 1590942 1596850 . - . ID=GSCOCP00037999001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:P40234,SwissProt:P67963,SwissProt:Q8BK63,TAIR:AT3G03940.1,TAIR:AT3G13670.1,TAIR:AT5G18190.1,TrEMBL:A5AZA1,TrEMBL:B9T069,TrEMBL:F6GUF7;Derives_from=GSCOCT00037999001;Name=Cc01_g01010;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Casein kinase I isoform alpha,CC_functional_completeness:modules,CC_gene:cki2,CC_gene:csnk1a1,CC_gene:Csnk1a1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037999001~ Putative Casein kinase I isoform alpha~ cki2~ modules;original_location=join(1583856..1583939%2C1584722..1584847%2C1584974..1585047%2C1585128..1585197%2C1585327..1585382%2C1585896..1585967%2C1586093..1586187%2C1586292..1586358%2C1586448..1586577%2C1586698..1586916%2C1587010..1587149%2C1587584..1587758%2C1587864..1587954%2C1588628..1588785%2C1589327..1589515%2C1589705..1589764);owner=coffea | |
| 1275 chr1 manual_curation exon 1596767 1597626 . - . Parent=GSCOCT00037999001 | |
| 1276 chr1 manual_curation exon 1595859 1595984 . - . Parent=GSCOCT00037999001 | |
| 1277 chr1 manual_curation exon 1595659 1595732 . - . Parent=GSCOCT00037999001 | |
| 1278 chr1 manual_curation exon 1595509 1595578 . - . Parent=GSCOCT00037999001 | |
| 1279 chr1 manual_curation exon 1595324 1595379 . - . Parent=GSCOCT00037999001 | |
| 1280 chr1 manual_curation exon 1594739 1594810 . - . Parent=GSCOCT00037999001 | |
| 1281 chr1 manual_curation exon 1594519 1594613 . - . Parent=GSCOCT00037999001 | |
| 1282 chr1 manual_curation exon 1594348 1594414 . - . Parent=GSCOCT00037999001 | |
| 1283 chr1 manual_curation exon 1594129 1594258 . - . Parent=GSCOCT00037999001 | |
| 1284 chr1 manual_curation exon 1593790 1594008 . - . Parent=GSCOCT00037999001 | |
| 1285 chr1 manual_curation exon 1593557 1593696 . - . Parent=GSCOCT00037999001 | |
| 1286 chr1 manual_curation exon 1592948 1593122 . - . Parent=GSCOCT00037999001 | |
| 1287 chr1 manual_curation exon 1592752 1592842 . - . Parent=GSCOCT00037999001 | |
| 1288 chr1 manual_curation exon 1591921 1592078 . - . Parent=GSCOCT00037999001 | |
| 1289 chr1 manual_curation exon 1591191 1591379 . - . Parent=GSCOCT00037999001 | |
| 1290 chr1 manual_curation exon 1590736 1591001 . - . Parent=GSCOCT00037999001 | |
| 1291 chr1 manual_curation CDS 1596767 1596850 . - 0 Parent=GSCOCT00037999001 | |
| 1292 chr1 manual_curation CDS 1595859 1595984 . - 0 Parent=GSCOCT00037999001 | |
| 1293 chr1 manual_curation CDS 1595659 1595732 . - 0 Parent=GSCOCT00037999001 | |
| 1294 chr1 manual_curation CDS 1595509 1595578 . - 2 Parent=GSCOCT00037999001 | |
| 1295 chr1 manual_curation CDS 1595324 1595379 . - 0 Parent=GSCOCT00037999001 | |
| 1296 chr1 manual_curation CDS 1594739 1594810 . - 2 Parent=GSCOCT00037999001 | |
| 1297 chr1 manual_curation CDS 1594519 1594613 . - 2 Parent=GSCOCT00037999001 | |
| 1298 chr1 manual_curation CDS 1594348 1594414 . - 1 Parent=GSCOCT00037999001 | |
| 1299 chr1 manual_curation CDS 1594129 1594258 . - 2 Parent=GSCOCT00037999001 | |
| 1300 chr1 manual_curation CDS 1593790 1594008 . - 0 Parent=GSCOCT00037999001 | |
| 1301 chr1 manual_curation CDS 1593557 1593696 . - 0 Parent=GSCOCT00037999001 | |
| 1302 chr1 manual_curation CDS 1592948 1593122 . - 2 Parent=GSCOCT00037999001 | |
| 1303 chr1 manual_curation CDS 1592752 1592842 . - 0 Parent=GSCOCT00037999001 | |
| 1304 chr1 manual_curation CDS 1591921 1592078 . - 1 Parent=GSCOCT00037999001 | |
| 1305 chr1 manual_curation CDS 1591191 1591379 . - 0 Parent=GSCOCT00037999001 | |
| 1306 chr1 manual_curation CDS 1590942 1591001 . - 0 Parent=GSCOCT00037999001 | |
| 1307 chr1 manual_curation gene 1605761 1614361 . + . ID=GSCOCG00037998001;Name=Cc01_g01020 | |
| 1308 chr1 manual_curation mRNA 1605761 1614361 . + . ID=GSCOCT00037998001;Parent=GSCOCG00037998001;Name=Cc01_g01020 | |
| 1309 chr1 manual_curation polypeptide 1605918 1613970 . + . ID=GSCOCP00037998001;Dbxref=InterPro:IPR000953,InterPro:IPR001025,InterPro:IPR001525,InterPro:IPR016197,InterPro:IPR018117,PANTHER:PTHR10629,PFAM:PF00145,PFAM:PF00385,PRINTS:PR00105,PROFILE:PS50013,PROFILE:PS51038,PROSITE:PS00094,SMART:SM00298,SMART:SM00439,SUPERFAMILY:SSF54160,SwissProt:Q8LPU5,SwissProt:Q9ARI6,SwissProt:Q9AXT8,TAIR:AT1G69770.1,TAIR:AT1G80740.1,TAIR:AT4G19020.1,TrEMBL:B9GLJ3,TrEMBL:F6GUF8,TrEMBL:F6KFY9;Derives_from=GSCOCT00037998001;Name=Cc01_g01020;Ontology_term=CC_evidence_code:ISS,GO:0000785,GO:0003677,GO:0003682,GO:0005634,GO:0006306,GO:0006333,CC_EC_number:2.1.1.37,PRODUCT:DNA (cytosine-5)-methyltransferase 1,CC_functional_completeness:complete,CC_gene:MET2A,CC_gene:DMT105,CC_gene:ZMET5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037998001~ DNA (cytosine-5)-methyltransferase 1~ MET2A~ complete;original_location=complement(join(1574426..1574788%2C1572984..1573018%2C1572765..1572864%2C1571537..1571644%2C1571335..1571454%2C1571155..1571254%2C1570856..1571055%2C1570712..1570777%2C1570345..1570614%2C1570182..1570240%2C1570027..1570093%2C1569606..1569935%2C1569451..1569519%2C1569284..1569370%2C1569096..1569183%2C1568516..1568634%2C1568254..1568358%2C1568117..1568160%2C1567952..1568021%2C1567756..1567859%2C1566736..1566895));owner=coffea | |
| 1310 chr1 manual_curation exon 1613811 1614361 . + . Parent=GSCOCT00037998001 | |
| 1311 chr1 manual_curation exon 1612847 1612950 . + . Parent=GSCOCT00037998001 | |
| 1312 chr1 manual_curation exon 1612685 1612754 . + . Parent=GSCOCT00037998001 | |
| 1313 chr1 manual_curation exon 1612546 1612589 . + . Parent=GSCOCT00037998001 | |
| 1314 chr1 manual_curation exon 1612348 1612452 . + . Parent=GSCOCT00037998001 | |
| 1315 chr1 manual_curation exon 1612072 1612190 . + . Parent=GSCOCT00037998001 | |
| 1316 chr1 manual_curation exon 1611523 1611610 . + . Parent=GSCOCT00037998001 | |
| 1317 chr1 manual_curation exon 1611336 1611422 . + . Parent=GSCOCT00037998001 | |
| 1318 chr1 manual_curation exon 1611187 1611255 . + . Parent=GSCOCT00037998001 | |
| 1319 chr1 manual_curation exon 1610771 1611100 . + . Parent=GSCOCT00037998001 | |
| 1320 chr1 manual_curation exon 1610613 1610679 . + . Parent=GSCOCT00037998001 | |
| 1321 chr1 manual_curation exon 1610466 1610524 . + . Parent=GSCOCT00037998001 | |
| 1322 chr1 manual_curation exon 1610092 1610361 . + . Parent=GSCOCT00037998001 | |
| 1323 chr1 manual_curation exon 1609929 1609994 . + . Parent=GSCOCT00037998001 | |
| 1324 chr1 manual_curation exon 1609651 1609850 . + . Parent=GSCOCT00037998001 | |
| 1325 chr1 manual_curation exon 1609452 1609551 . + . Parent=GSCOCT00037998001 | |
| 1326 chr1 manual_curation exon 1609252 1609371 . + . Parent=GSCOCT00037998001 | |
| 1327 chr1 manual_curation exon 1609062 1609169 . + . Parent=GSCOCT00037998001 | |
| 1328 chr1 manual_curation exon 1607842 1607941 . + . Parent=GSCOCT00037998001 | |
| 1329 chr1 manual_curation exon 1607688 1607722 . + . Parent=GSCOCT00037998001 | |
| 1330 chr1 manual_curation exon 1605761 1606280 . + . Parent=GSCOCT00037998001 | |
| 1331 chr1 manual_curation CDS 1613811 1613970 . + 2 Parent=GSCOCT00037998001 | |
| 1332 chr1 manual_curation CDS 1612847 1612950 . + 0 Parent=GSCOCT00037998001 | |
| 1333 chr1 manual_curation CDS 1612685 1612754 . + 2 Parent=GSCOCT00037998001 | |
| 1334 chr1 manual_curation CDS 1612546 1612589 . + 0 Parent=GSCOCT00037998001 | |
| 1335 chr1 manual_curation CDS 1612348 1612452 . + 0 Parent=GSCOCT00037998001 | |
| 1336 chr1 manual_curation CDS 1612072 1612190 . + 1 Parent=GSCOCT00037998001 | |
| 1337 chr1 manual_curation CDS 1611523 1611610 . + 0 Parent=GSCOCT00037998001 | |
| 1338 chr1 manual_curation CDS 1611336 1611422 . + 0 Parent=GSCOCT00037998001 | |
| 1339 chr1 manual_curation CDS 1611187 1611255 . + 0 Parent=GSCOCT00037998001 | |
| 1340 chr1 manual_curation CDS 1610771 1611100 . + 0 Parent=GSCOCT00037998001 | |
| 1341 chr1 manual_curation CDS 1610613 1610679 . + 2 Parent=GSCOCT00037998001 | |
| 1342 chr1 manual_curation CDS 1610466 1610524 . + 0 Parent=GSCOCT00037998001 | |
| 1343 chr1 manual_curation CDS 1610092 1610361 . + 0 Parent=GSCOCT00037998001 | |
| 1344 chr1 manual_curation CDS 1609929 1609994 . + 0 Parent=GSCOCT00037998001 | |
| 1345 chr1 manual_curation CDS 1609651 1609850 . + 1 Parent=GSCOCT00037998001 | |
| 1346 chr1 manual_curation CDS 1609452 1609551 . + 0 Parent=GSCOCT00037998001 | |
| 1347 chr1 manual_curation CDS 1609252 1609371 . + 0 Parent=GSCOCT00037998001 | |
| 1348 chr1 manual_curation CDS 1609062 1609169 . + 0 Parent=GSCOCT00037998001 | |
| 1349 chr1 manual_curation CDS 1607842 1607941 . + 2 Parent=GSCOCT00037998001 | |
| 1350 chr1 manual_curation CDS 1607688 1607722 . + 0 Parent=GSCOCT00037998001 | |
| 1351 chr1 manual_curation CDS 1605918 1606280 . + 0 Parent=GSCOCT00037998001 | |
| 1352 chr1 manual_curation gene 1615130 1615680 . - . ID=GSCOCG00037997001;Name=Cc01_g01030 | |
| 1353 chr1 manual_curation mRNA 1615130 1615680 . - . ID=GSCOCT00037997001;Parent=GSCOCG00037997001;Name=Cc01_g01030 | |
| 1354 chr1 manual_curation polypeptide 1615245 1615562 . - . ID=GSCOCP00037997001;Dbxref=TAIR:AT2G20480.1,TrEMBL:A9P9F7,TrEMBL:D7L3N9,TrEMBL:I1N2G7;Derives_from=GSCOCT00037997001;Name=Cc01_g01030;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Predicted protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037997001~ Predicted protein~ unknown_gene~ complete;original_location=join(1565144..1565266%2C1565363..1565461);owner=coffea | |
| 1355 chr1 manual_curation exon 1615440 1615680 . - . Parent=GSCOCT00037997001 | |
| 1356 chr1 manual_curation exon 1615130 1615343 . - . Parent=GSCOCT00037997001 | |
| 1357 chr1 manual_curation CDS 1615440 1615562 . - 0 Parent=GSCOCT00037997001 | |
| 1358 chr1 manual_curation CDS 1615245 1615343 . - 0 Parent=GSCOCT00037997001 | |
| 1359 chr1 manual_curation gene 1616856 1621656 . - . ID=GSCOCG00037996001;Name=Cc01_g01040 | |
| 1360 chr1 manual_curation mRNA 1616856 1621656 . - . ID=GSCOCT00037996001;Parent=GSCOCG00037996001;Name=Cc01_g01040 | |
| 1361 chr1 manual_curation polypeptide 1617102 1621268 . - . ID=GSCOCP00037996001;Dbxref=InterPro:IPR000270,PFAM:PF00564,SMART:SM00666,SwissProt:Q0JC27,SwissProt:Q84TH9,SwissProt:Q8RWY4,TAIR:AT1G20640.1,TAIR:AT1G64530.1,TAIR:AT4G24020.1,TrEMBL:B9RYP2,TrEMBL:I1LDQ1,TrEMBL:I1NGV0;Derives_from=GSCOCT00037996001;Name=Cc01_g01040;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein NLP2,CC_functional_completeness:modules,CC_gene:NLP6,CC_gene:NLP7,CC_gene:NLP2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037996001~ Putative Protein NLP2~ NLP6~ modules;original_location=join(1559438..1559956%2C1561092..1561142%2C1561260..1562010%2C1562128..1563503%2C1563560..1563604);owner=coffea | |
| 1362 chr1 manual_curation exon 1620750 1621656 . - . Parent=GSCOCT00037996001 | |
| 1363 chr1 manual_curation exon 1619564 1619614 . - . Parent=GSCOCT00037996001 | |
| 1364 chr1 manual_curation exon 1618696 1619446 . - . Parent=GSCOCT00037996001 | |
| 1365 chr1 manual_curation exon 1617203 1618578 . - . Parent=GSCOCT00037996001 | |
| 1366 chr1 manual_curation exon 1616856 1617146 . - . Parent=GSCOCT00037996001 | |
| 1367 chr1 manual_curation CDS 1620750 1621268 . - 0 Parent=GSCOCT00037996001 | |
| 1368 chr1 manual_curation CDS 1619564 1619614 . - 0 Parent=GSCOCT00037996001 | |
| 1369 chr1 manual_curation CDS 1618696 1619446 . - 0 Parent=GSCOCT00037996001 | |
| 1370 chr1 manual_curation CDS 1617203 1618578 . - 1 Parent=GSCOCT00037996001 | |
| 1371 chr1 manual_curation CDS 1617102 1617146 . - 0 Parent=GSCOCT00037996001 | |
| 1372 chr1 manual_curation gene 1626772 1630412 . + . ID=GSCOCG00037995001;Name=Cc01_g01050 | |
| 1373 chr1 manual_curation mRNA 1626772 1630412 . + . ID=GSCOCT00037995001;Parent=GSCOCG00037995001;Name=Cc01_g01050 | |
| 1374 chr1 manual_curation polypeptide 1626772 1630346 . + . ID=GSCOCP00037995001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:A8MQA3,SwissProt:Q8LK93,SwissProt:Q9ZQA1,TAIR:AT2G02980.1,TAIR:AT2G36730.1,TAIR:AT4G21065.1,TIGRFAMs:TIGR00756,TrEMBL:B9HY03,TrEMBL:D7TN78,TrEMBL:I1KRU7;Derives_from=GSCOCT00037995001;Name=Cc01_g01050;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Pentatricopeptide repeat-containing protein At2g36730,CC_functional_completeness:complete,CC_gene:PCMP-E44,CC_gene:PCMP-H28,CC_gene:PCMP-H26;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037995001~ Putative Pentatricopeptide repeat-containing protein At2g36730~ PCMP-E44~ complete;original_location=complement(join(1553396..1553934%2C1551462..1552262%2C1550652..1550776%2C1550360..1550418));owner=coffea | |
| 1375 chr1 manual_curation exon 1630288 1630412 . + . Parent=GSCOCT00037995001 | |
| 1376 chr1 manual_curation exon 1629930 1630054 . + . Parent=GSCOCT00037995001 | |
| 1377 chr1 manual_curation exon 1628444 1629244 . + . Parent=GSCOCT00037995001 | |
| 1378 chr1 manual_curation exon 1626772 1627310 . + . Parent=GSCOCT00037995001 | |
| 1379 chr1 manual_curation CDS 1630288 1630346 . + 1 Parent=GSCOCT00037995001 | |
| 1380 chr1 manual_curation CDS 1629930 1630054 . + 2 Parent=GSCOCT00037995001 | |
| 1381 chr1 manual_curation CDS 1628444 1629244 . + 2 Parent=GSCOCT00037995001 | |
| 1382 chr1 manual_curation CDS 1626772 1627310 . + 0 Parent=GSCOCT00037995001 | |
| 1383 chr1 manual_curation gene 1632997 1633898 . - . ID=GSCOCG00037993001;Name=Cc01_g01060 | |
| 1384 chr1 manual_curation mRNA 1632997 1633898 . - . ID=GSCOCT00037993001;Parent=GSCOCG00037993001;Name=Cc01_g01060 | |
| 1385 chr1 manual_curation polypeptide 1633361 1633750 . - . ID=GSCOCP00037993001;Dbxref=TAIR:AT2G31940.1,TAIR:AT5G19875.1,TrEMBL:B8LM81,TrEMBL:G7KH57,TrEMBL:H9XBK8;Derives_from=GSCOCT00037993001;Name=Cc01_g01060;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037993001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: response to oxidative stress%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G31940.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ unknown_gene~ complete;original_location=1546956..1547345;owner=coffea | |
| 1386 chr1 manual_curation exon 1632997 1633898 . - . Parent=GSCOCT00037993001 | |
| 1387 chr1 manual_curation CDS 1633361 1633750 . - 0 Parent=GSCOCT00037993001 | |
| 1388 chr1 manual_curation gene 1651392 1651964 . - . ID=GSCOCG00037992001;Name=Cc01_g01070 | |
| 1389 chr1 manual_curation mRNA 1651392 1651964 . - . ID=GSCOCT00037992001;Parent=GSCOCG00037992001;Name=Cc01_g01070 | |
| 1390 chr1 manual_curation polypeptide 1651392 1651964 . - . ID=GSCOCP00037992001;Dbxref=InterPro:IPR004265,PFAM:PF03018,TAIR:AT1G55210.1,TAIR:AT1G58170.1,TAIR:AT3G13650.1,TrEMBL:C6TAH7,TrEMBL:D2DMN3,TrEMBL:H8ZXA8;Derives_from=GSCOCT00037992001;Name=Cc01_g01070;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Disease resistance-responsive (dirigent-like protein) family protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037992001~ Disease resistance-responsive (dirigent-like protein) family protein~ unknown_gene~ modules;original_location=1528742..1529314;owner=coffea | |
| 1391 chr1 manual_curation exon 1651392 1651964 . - . Parent=GSCOCT00037992001 | |
| 1392 chr1 manual_curation CDS 1651392 1651964 . - 0 Parent=GSCOCT00037992001 | |
| 1393 chr1 manual_curation gene 1676519 1677103 . - . ID=GSCOCG00037987001;Name=Cc01_g01080 | |
| 1394 chr1 manual_curation mRNA 1676519 1677103 . - . ID=GSCOCT00037987001;Parent=GSCOCG00037987001;Name=Cc01_g01080 | |
| 1395 chr1 manual_curation polypeptide 1676519 1677103 . - . ID=GSCOCP00037987001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,SwissProt:Q9LME8,SwissProt:Q9SK82,SwissProt:Q9ZWJ3,TAIR:AT1G22340.1,TAIR:AT1G22360.1,TAIR:AT1G22400.1,TrEMBL:A5B177,TrEMBL:A9PFY6,TrEMBL:F6HJK8;Derives_from=GSCOCT00037987001;Name=Cc01_g01080;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:Putative UDP-glycosyltransferase 85A7,CC_functional_completeness:fragment,CC_gene:UGT85A7,CC_gene:UGT85A2,CC_gene:UGT85A1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037987001~ Putative UDP-glycosyltransferase 85A7~ UGT85A7~ fragment;original_location=join(1503603..1503977%2C1504071..1504187);owner=coffea | |
| 1396 chr1 manual_curation exon 1676729 1677103 . - . Parent=GSCOCT00037987001 | |
| 1397 chr1 manual_curation exon 1676519 1676635 . - . Parent=GSCOCT00037987001 | |
| 1398 chr1 manual_curation CDS 1676729 1677103 . - 0 Parent=GSCOCT00037987001 | |
| 1399 chr1 manual_curation CDS 1676519 1676635 . - 0 Parent=GSCOCT00037987001 | |
| 1400 chr1 manual_curation gene 1691456 1692160 . + . ID=GSCOCG00037986001;Name=Cc01_g01090 | |
| 1401 chr1 manual_curation mRNA 1691456 1692160 . + . ID=GSCOCT00037986001;Parent=GSCOCG00037986001;Name=Cc01_g01090 | |
| 1402 chr1 manual_curation polypeptide 1691456 1692160 . + . ID=GSCOCP00037986001;Dbxref=InterPro:IPR000163,InterPro:IPR001107,PANTHER:PTHR23222,PFAM:PF01145,PRINTS:PR00679,SwissProt:P50085,SwissProt:P67779,SwissProt:Q54Q31,TAIR:AT1G03860.1,TAIR:AT2G20530.1,TAIR:AT4G28510.1,TrEMBL:A5BVI0,TrEMBL:F6H9U4,TrEMBL:Q4ZGM7;Derives_from=GSCOCT00037986001;Name=Cc01_g01090;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Prohibitin-2,CC_functional_completeness:fragment,CC_gene:PHB2,CC_gene:phbB,CC_gene:Phb;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037986001~ Prohibitin-2~ PHB2~ fragment;original_location=complement(join(1489173..1489250%2C1489014..1489112%2C1488546..1488728));owner=coffea | |
| 1403 chr1 manual_curation exon 1691978 1692160 . + . Parent=GSCOCT00037986001 | |
| 1404 chr1 manual_curation exon 1691594 1691692 . + . Parent=GSCOCT00037986001 | |
| 1405 chr1 manual_curation exon 1691456 1691533 . + . Parent=GSCOCT00037986001 | |
| 1406 chr1 manual_curation CDS 1691978 1692160 . + 0 Parent=GSCOCT00037986001 | |
| 1407 chr1 manual_curation CDS 1691594 1691692 . + 0 Parent=GSCOCT00037986001 | |
| 1408 chr1 manual_curation CDS 1691456 1691533 . + 0 Parent=GSCOCT00037986001 | |
| 1409 chr1 manual_curation gene 1706639 1711303 . - . ID=GSCOCG00037984001;Name=Cc01_g01100 | |
| 1410 chr1 manual_curation mRNA 1706639 1711303 . - . ID=GSCOCT00037984001;Parent=GSCOCG00037984001;Name=Cc01_g01100 | |
| 1411 chr1 manual_curation polypeptide 1707114 1710850 . - . ID=GSCOCP00037984001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,SwissProt:Q9LMF1,SwissProt:Q9SK82,SwissProt:Q9ZWJ3,TAIR:AT1G22360.1,TAIR:AT1G22380.1,TAIR:AT1G22400.1,TrEMBL:F6HJK8,TrEMBL:F6I298,TrEMBL:F6I299;Derives_from=GSCOCT00037984001;Name=Cc01_g01100;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:Putative UDP-glycosyltransferase 85A3,CC_functional_completeness:fragment,CC_gene:UGT85A3,CC_gene:UGT85A2,CC_gene:UGT85A1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037984001~ Putative UDP-glycosyltransferase 85A3~ UGT85A3~ fragment;original_location=join(1469856..1469988%2C1472893..1473410%2C1473506..1473592);owner=coffea | |
| 1412 chr1 manual_curation exon 1710718 1711303 . - . Parent=GSCOCT00037984001 | |
| 1413 chr1 manual_curation exon 1707296 1707813 . - . Parent=GSCOCT00037984001 | |
| 1414 chr1 manual_curation exon 1706639 1707200 . - . Parent=GSCOCT00037984001 | |
| 1415 chr1 manual_curation CDS 1710718 1710850 . - 0 Parent=GSCOCT00037984001 | |
| 1416 chr1 manual_curation CDS 1707296 1707813 . - 1 Parent=GSCOCT00037984001 | |
| 1417 chr1 manual_curation CDS 1707114 1707200 . - 0 Parent=GSCOCT00037984001 | |
| 1418 chr1 manual_curation gene 1721135 1721917 . + . ID=GSCOCG00037983001;Name=Cc01_g01110 | |
| 1419 chr1 manual_curation mRNA 1721135 1721917 . + . ID=GSCOCT00037983001;Parent=GSCOCG00037983001;Name=Cc01_g01110 | |
| 1420 chr1 manual_curation polypeptide 1721135 1721917 . + . ID=GSCOCP00037983001;Dbxref=InterPro:IPR000163,InterPro:IPR001107,PANTHER:PTHR23222,PFAM:PF01145,PRINTS:PR00679,SwissProt:P40961,SwissProt:P50085,SwissProt:Q54Q31,TAIR:AT1G03860.1,TAIR:AT2G20530.1,TAIR:AT4G28510.1,TrEMBL:A5BVI0,TrEMBL:F6H9U4,TrEMBL:Q4ZGM7;Derives_from=GSCOCT00037983001;Name=Cc01_g01110;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Prohibitin-2,CC_functional_completeness:fragment,CC_gene:PHB2,CC_gene:phbB,CC_gene:PHB1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037983001~ Prohibitin-2~ PHB2~ fragment;original_location=complement(join(1459468..1459571%2C1459257..1459368%2C1458789..1458971));owner=coffea | |
| 1421 chr1 manual_curation exon 1721735 1721917 . + . Parent=GSCOCT00037983001 | |
| 1422 chr1 manual_curation exon 1721338 1721449 . + . Parent=GSCOCT00037983001 | |
| 1423 chr1 manual_curation exon 1721135 1721238 . + . Parent=GSCOCT00037983001 | |
| 1424 chr1 manual_curation CDS 1721735 1721917 . + 0 Parent=GSCOCT00037983001 | |
| 1425 chr1 manual_curation CDS 1721338 1721449 . + 2 Parent=GSCOCT00037983001 | |
| 1426 chr1 manual_curation CDS 1721135 1721238 . + 0 Parent=GSCOCT00037983001 | |
| 1427 chr1 manual_curation gene 1750110 1752702 . - . ID=GSCOCG00037981001;Name=Cc01_g01120 | |
| 1428 chr1 manual_curation mRNA 1750110 1752702 . - . ID=GSCOCT00037981001;Parent=GSCOCG00037981001;Name=Cc01_g01120 | |
| 1429 chr1 manual_curation polypeptide 1750110 1752702 . - . ID=GSCOCP00037981001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,PROSITE:PS00375,SwissProt:Q9LMF1,SwissProt:Q9SK82,SwissProt:Q9ZWJ3,TAIR:AT1G22360.1,TAIR:AT1G22380.1,TAIR:AT1G22400.1,TrEMBL:A9PFY6,TrEMBL:F6HJK8,TrEMBL:F6I299;Derives_from=GSCOCT00037981001;Name=Cc01_g01120;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:UDP-glycosyltransferase 85A3,CC_functional_completeness:complete,CC_gene:UGT85A3,CC_gene:UGT85A2,CC_gene:UGT85A1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037981001~ UDP-glycosyltransferase 85A3~ UGT85A3~ complete;original_location=join(1428004..1428282%2C1428347..1428515%2C1429653..1430596);owner=coffea | |
| 1430 chr1 manual_curation exon 1752424 1752702 . - . Parent=GSCOCT00037981001 | |
| 1431 chr1 manual_curation exon 1752191 1752359 . - . Parent=GSCOCT00037981001 | |
| 1432 chr1 manual_curation exon 1750110 1751053 . - . Parent=GSCOCT00037981001 | |
| 1433 chr1 manual_curation CDS 1752424 1752702 . - 0 Parent=GSCOCT00037981001 | |
| 1434 chr1 manual_curation CDS 1752191 1752359 . - 0 Parent=GSCOCT00037981001 | |
| 1435 chr1 manual_curation CDS 1750110 1751053 . - 1 Parent=GSCOCT00037981001 | |
| 1436 chr1 manual_curation gene 1758496 1760657 . - . ID=GSCOCG00037980001;Name=Cc01_g01130 | |
| 1437 chr1 manual_curation mRNA 1758496 1760657 . - . ID=GSCOCT00037980001;Parent=GSCOCG00037980001;Name=Cc01_g01130 | |
| 1438 chr1 manual_curation polypeptide 1758496 1760657 . - . ID=GSCOCP00037980001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,PROSITE:PS00375,SwissProt:Q9LME8,SwissProt:Q9LMF1,SwissProt:Q9ZWJ3,TAIR:AT1G22340.1,TAIR:AT1G22360.1,TAIR:AT1G22380.1,TrEMBL:A9PFY6,TrEMBL:F6HJK8,TrEMBL:F6I299;Derives_from=GSCOCT00037980001;Name=Cc01_g01130;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:UDP-glycosyltransferase 85A3,CC_functional_completeness:complete,CC_gene:UGT85A3,CC_gene:UGT85A2,CC_gene:UGT85A7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037980001~ UDP-glycosyltransferase 85A3~ UGT85A3~ complete;original_location=join(1420049..1420568%2C1421216..1422210);owner=coffea | |
| 1439 chr1 manual_curation exon 1760138 1760657 . - . Parent=GSCOCT00037980001 | |
| 1440 chr1 manual_curation exon 1758496 1759490 . - . Parent=GSCOCT00037980001 | |
| 1441 chr1 manual_curation CDS 1760138 1760657 . - 0 Parent=GSCOCT00037980001 | |
| 1442 chr1 manual_curation CDS 1758496 1759490 . - 1 Parent=GSCOCT00037980001 | |
| 1443 chr1 manual_curation gene 1768663 1771209 . + . ID=GSCOCG00037977001;Name=Cc01_g01140 | |
| 1444 chr1 manual_curation mRNA 1768663 1771209 . + . ID=GSCOCT00037977001;Parent=GSCOCG00037977001;Name=Cc01_g01140 | |
| 1445 chr1 manual_curation polypeptide 1768663 1771209 . + . ID=GSCOCP00037977001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q6L3Z7,SwissProt:Q6L400,SwissProt:Q6L403,TAIR:AT3G46530.1,TAIR:AT5G43470.1,TAIR:AT5G48620.1,TrEMBL:Q96485,TrEMBL:Q9LLD0,TrEMBL:Q9LLD4;Derives_from=GSCOCT00037977001;Name=Cc01_g01140;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1B-17,CC_functional_completeness:fragment,CC_gene:R1B-17,CC_gene:R1B-14,CC_gene:R1B-16;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037977001~ Putative late blight resistance protein homolog R1B-17~ R1B-17~ fragment;original_location=complement(join(1411001..1412043%2C1410029..1410940%2C1409896..1409966%2C1409497..1409549));owner=coffea | |
| 1446 chr1 manual_curation exon 1771157 1771209 . + . Parent=GSCOCT00037977001 | |
| 1447 chr1 manual_curation exon 1770740 1770810 . + . Parent=GSCOCT00037977001 | |
| 1448 chr1 manual_curation exon 1769766 1770677 . + . Parent=GSCOCT00037977001 | |
| 1449 chr1 manual_curation exon 1768663 1769705 . + . Parent=GSCOCT00037977001 | |
| 1450 chr1 manual_curation CDS 1771157 1771209 . + 1 Parent=GSCOCT00037977001 | |
| 1451 chr1 manual_curation CDS 1770740 1770810 . + 2 Parent=GSCOCT00037977001 | |
| 1452 chr1 manual_curation CDS 1769766 1770677 . + 2 Parent=GSCOCT00037977001 | |
| 1453 chr1 manual_curation CDS 1768663 1769705 . + 0 Parent=GSCOCT00037977001 | |
| 1454 chr1 manual_curation gene 1774889 1776661 . - . ID=GSCOCG00037975001;Name=Cc01_g01150 | |
| 1455 chr1 manual_curation mRNA 1774889 1776661 . - . ID=GSCOCT00037975001;Parent=GSCOCG00037975001;Name=Cc01_g01150 | |
| 1456 chr1 manual_curation polypeptide 1774889 1775089 . - . ID=GSCOCP00037975001;Derives_from=GSCOCT00037975001;Name=Cc01_g01150;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037975001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1405617..1405817;owner=coffea | |
| 1457 chr1 manual_curation exon 1776386 1776661 . - . Parent=GSCOCT00037975001 | |
| 1458 chr1 manual_curation exon 1774889 1776296 . - . Parent=GSCOCT00037975001 | |
| 1459 chr1 manual_curation CDS 1774889 1775089 . - 0 Parent=GSCOCT00037975001 | |
| 1460 chr1 manual_curation gene 1784178 1784905 . - . ID=GSCOCG00037973001;Name=Cc01_g01160 | |
| 1461 chr1 manual_curation mRNA 1784178 1784905 . - . ID=GSCOCT00037973001;Parent=GSCOCG00037973001;Name=Cc01_g01160 | |
| 1462 chr1 manual_curation polypeptide 1784311 1784889 . - . ID=GSCOCP00037973001;Dbxref=InterPro:IPR004265,PFAM:PF03018,TAIR:AT1G58170.1,TAIR:AT3G13650.1,TAIR:AT5G49040.1,TrEMBL:A9PD67,TrEMBL:C6TAH7,TrEMBL:D2DMN3;Derives_from=GSCOCT00037973001;Name=Cc01_g01160;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Disease resistance-responsive (dirigent-like protein) family protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037973001~ Disease resistance-responsive (dirigent-like protein) family protein~ unknown_gene~ modules;original_location=1395817..1396395;owner=coffea | |
| 1463 chr1 manual_curation exon 1784178 1784905 . - . Parent=GSCOCT00037973001 | |
| 1464 chr1 manual_curation CDS 1784311 1784889 . - 0 Parent=GSCOCT00037973001 | |
| 1465 chr1 manual_curation gene 1785838 1786432 . - . ID=GSCOCG00037972001;Name=Cc01_g01170 | |
| 1466 chr1 manual_curation mRNA 1785838 1786432 . - . ID=GSCOCT00037972001;Parent=GSCOCG00037972001;Name=Cc01_g01170 | |
| 1467 chr1 manual_curation polypeptide 1785838 1786416 . - . ID=GSCOCP00037972001;Dbxref=InterPro:IPR004265,PFAM:PF03018,SwissProt:P13240,TAIR:AT1G58170.1,TAIR:AT3G13650.1,TAIR:AT5G49040.1,TrEMBL:A9PD67,TrEMBL:C6TAH7,TrEMBL:D2DMN3;Derives_from=GSCOCT00037972001;Name=Cc01_g01170;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Disease resistance-responsive (dirigent-like protein) family protein,CC_functional_completeness:modules,CC_gene:PI206;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037972001~ Disease resistance-responsive (dirigent-like protein) family protein~ PI206~ modules;original_location=1394290..1394868;owner=coffea | |
| 1468 chr1 manual_curation exon 1785838 1786432 . - . Parent=GSCOCT00037972001 | |
| 1469 chr1 manual_curation CDS 1785838 1786416 . - 0 Parent=GSCOCT00037972001 | |
| 1470 chr1 manual_curation gene 1791623 1800743 . - . ID=GSCOCG00037970001;Name=Cc01_g01180 | |
| 1471 chr1 manual_curation mRNA 1791623 1800743 . - . ID=GSCOCT00037970001;Parent=GSCOCG00037970001;Name=Cc01_g01180 | |
| 1472 chr1 manual_curation polypeptide 1792798 1800645 . - . ID=GSCOCP00037970001;Dbxref=InterPro:IPR000182,InterPro:IPR001965,InterPro:IPR011011,InterPro:IPR016181,InterPro:IPR019787,PROFILE:PS50016,PROFILE:PS51186,SMART:SM00249,SUPERFAMILY:SSF55729,SUPERFAMILY:SSF57903,TAIR:AT1G05380.1,TAIR:AT4G14920.1,TAIR:AT5G36740.1,TrEMBL:B9RTS1,TrEMBL:F6HDQ0,TrEMBL:F6HI46;Derives_from=GSCOCT00037970001;Name=Cc01_g01180;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008080,GO:0008152,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037970001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(1380061..1380147%2C1380286..1380330%2C1380449..1382590%2C1382685..1382760%2C1382908..1382976%2C1383088..1383170%2C1384053..1384291%2C1384951..1385037%2C1386175..1386274%2C1387477..1387675%2C1387748..1387908);owner=coffea | |
| 1473 chr1 manual_curation exon 1800559 1800743 . - . Parent=GSCOCT00037970001 | |
| 1474 chr1 manual_curation exon 1800376 1800420 . - . Parent=GSCOCT00037970001 | |
| 1475 chr1 manual_curation exon 1798116 1800257 . - . Parent=GSCOCT00037970001 | |
| 1476 chr1 manual_curation exon 1797946 1798021 . - . Parent=GSCOCT00037970001 | |
| 1477 chr1 manual_curation exon 1797730 1797798 . - . Parent=GSCOCT00037970001 | |
| 1478 chr1 manual_curation exon 1797536 1797618 . - . Parent=GSCOCT00037970001 | |
| 1479 chr1 manual_curation exon 1796415 1796653 . - . Parent=GSCOCT00037970001 | |
| 1480 chr1 manual_curation exon 1795669 1795755 . - . Parent=GSCOCT00037970001 | |
| 1481 chr1 manual_curation exon 1794432 1794531 . - . Parent=GSCOCT00037970001 | |
| 1482 chr1 manual_curation exon 1793031 1793229 . - . Parent=GSCOCT00037970001 | |
| 1483 chr1 manual_curation exon 1791623 1792958 . - . Parent=GSCOCT00037970001 | |
| 1484 chr1 manual_curation CDS 1800559 1800645 . - 0 Parent=GSCOCT00037970001 | |
| 1485 chr1 manual_curation CDS 1800376 1800420 . - 0 Parent=GSCOCT00037970001 | |
| 1486 chr1 manual_curation CDS 1798116 1800257 . - 0 Parent=GSCOCT00037970001 | |
| 1487 chr1 manual_curation CDS 1797946 1798021 . - 0 Parent=GSCOCT00037970001 | |
| 1488 chr1 manual_curation CDS 1797730 1797798 . - 1 Parent=GSCOCT00037970001 | |
| 1489 chr1 manual_curation CDS 1797536 1797618 . - 1 Parent=GSCOCT00037970001 | |
| 1490 chr1 manual_curation CDS 1796415 1796653 . - 0 Parent=GSCOCT00037970001 | |
| 1491 chr1 manual_curation CDS 1795669 1795755 . - 2 Parent=GSCOCT00037970001 | |
| 1492 chr1 manual_curation CDS 1794432 1794531 . - 2 Parent=GSCOCT00037970001 | |
| 1493 chr1 manual_curation CDS 1793031 1793229 . - 0 Parent=GSCOCT00037970001 | |
| 1494 chr1 manual_curation CDS 1792798 1792958 . - 1 Parent=GSCOCT00037970001 | |
| 1495 chr1 manual_curation gene 1813579 1814034 . - . ID=GSCOCG00037969001;Name=Cc01_g01190 | |
| 1496 chr1 manual_curation mRNA 1813579 1814034 . - . ID=GSCOCT00037969001;Parent=GSCOCG00037969001;Name=Cc01_g01190 | |
| 1497 chr1 manual_curation polypeptide 1813579 1814034 . - . ID=GSCOCP00037969001;Dbxref=InterPro:IPR004265,PFAM:PF03018,SwissProt:P13240,TAIR:AT1G55210.1,TAIR:AT1G58170.1,TAIR:AT3G13650.1,TrEMBL:A9PD67,TrEMBL:C6TAH7,TrEMBL:D2DMN3;Derives_from=GSCOCT00037969001;Name=Cc01_g01190;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Disease resistance response protein 206,CC_functional_completeness:fragment,CC_gene:PI206;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037969001~ Putative Disease resistance response protein 206~ PI206~ fragment;original_location=1366672..1367127;owner=coffea | |
| 1498 chr1 manual_curation exon 1813579 1814034 . - . Parent=GSCOCT00037969001 | |
| 1499 chr1 manual_curation CDS 1813579 1814034 . - 0 Parent=GSCOCT00037969001 | |
| 1500 chr1 manual_curation gene 1817760 1818655 . - . ID=GSCOCG00037968001;Name=Cc01_g01200 | |
| 1501 chr1 manual_curation mRNA 1817760 1818655 . - . ID=GSCOCT00037968001;Parent=GSCOCG00037968001;Name=Cc01_g01200 | |
| 1502 chr1 manual_curation polypeptide 1818002 1818457 . - . ID=GSCOCP00037968001;Dbxref=InterPro:IPR004265,PFAM:PF03018,SwissProt:P13240,TAIR:AT1G55210.1,TAIR:AT1G58170.1,TAIR:AT5G49040.1,TrEMBL:C6TAH7,TrEMBL:D2DMN3,TrEMBL:I1KKL4;Derives_from=GSCOCT00037968001;Name=Cc01_g01200;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Disease resistance response protein 206,CC_functional_completeness:fragment,CC_gene:PI206;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037968001~ Putative Disease resistance response protein 206~ PI206~ fragment;original_location=1362249..1362704;owner=coffea | |
| 1503 chr1 manual_curation exon 1817760 1818655 . - . Parent=GSCOCT00037968001 | |
| 1504 chr1 manual_curation CDS 1818002 1818457 . - 0 Parent=GSCOCT00037968001 | |
| 1505 chr1 manual_curation gene 1821969 1822841 . - . ID=GSCOCG00037967001;Name=Cc01_g01210 | |
| 1506 chr1 manual_curation mRNA 1821969 1822841 . - . ID=GSCOCT00037967001;Parent=GSCOCG00037967001;Name=Cc01_g01210 | |
| 1507 chr1 manual_curation polypeptide 1822194 1822649 . - . ID=GSCOCP00037967001;Dbxref=InterPro:IPR004265,PFAM:PF03018,SwissProt:P13240,TAIR:AT1G55210.1,TAIR:AT1G58170.1,TAIR:AT3G13650.1,TrEMBL:C6TAH7,TrEMBL:D2DMN3,TrEMBL:I1KKL4;Derives_from=GSCOCT00037967001;Name=Cc01_g01210;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Disease resistance response protein 206,CC_functional_completeness:fragment,CC_gene:PI206;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037967001~ Putative Disease resistance response protein 206~ PI206~ fragment;original_location=1358057..1358512;owner=coffea | |
| 1508 chr1 manual_curation exon 1821969 1822841 . - . Parent=GSCOCT00037967001 | |
| 1509 chr1 manual_curation CDS 1822194 1822649 . - 0 Parent=GSCOCT00037967001 | |
| 1510 chr1 manual_curation gene 1871407 1873275 . + . ID=GSCOCG00037961001;Name=Cc01_g01220 | |
| 1511 chr1 manual_curation mRNA 1871407 1873275 . + . ID=GSCOCT00037961001;Parent=GSCOCG00037961001;Name=Cc01_g01220 | |
| 1512 chr1 manual_curation polypeptide 1871407 1873121 . + . ID=GSCOCP00037961001;Derives_from=GSCOCT00037961001;Name=Cc01_g01220;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037961001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1309259..1309299%2C1308909..1308955%2C1308641..1308776%2C1307585..1307663));owner=coffea | |
| 1513 chr1 manual_curation exon 1873043 1873275 . + . Parent=GSCOCT00037961001 | |
| 1514 chr1 manual_curation exon 1871930 1872065 . + . Parent=GSCOCT00037961001 | |
| 1515 chr1 manual_curation exon 1871751 1871797 . + . Parent=GSCOCT00037961001 | |
| 1516 chr1 manual_curation exon 1871407 1871447 . + . Parent=GSCOCT00037961001 | |
| 1517 chr1 manual_curation CDS 1873043 1873121 . + 2 Parent=GSCOCT00037961001 | |
| 1518 chr1 manual_curation CDS 1871930 1872065 . + 1 Parent=GSCOCT00037961001 | |
| 1519 chr1 manual_curation CDS 1871751 1871797 . + 2 Parent=GSCOCT00037961001 | |
| 1520 chr1 manual_curation CDS 1871407 1871447 . + 0 Parent=GSCOCT00037961001 | |
| 1521 chr1 manual_curation gene 1873485 1874972 . + . ID=GSCOCG00037960001;Name=Cc01_g01230 | |
| 1522 chr1 manual_curation mRNA 1873485 1874972 . + . ID=GSCOCT00037960001;Parent=GSCOCG00037960001;Name=Cc01_g01230 | |
| 1523 chr1 manual_curation polypeptide 1874541 1874828 . + . ID=GSCOCP00037960001;Derives_from=GSCOCT00037960001;Name=Cc01_g01230;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037960001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1306051..1306165%2C1305878..1305951));owner=coffea | |
| 1524 chr1 manual_curation exon 1873485 1873911 . + . Parent=GSCOCT00037960001 | |
| 1525 chr1 manual_curation exon 1874755 1874972 . + . Parent=GSCOCT00037960001 | |
| 1526 chr1 manual_curation exon 1874428 1874655 . + . Parent=GSCOCT00037960001 | |
| 1527 chr1 manual_curation CDS 1874755 1874828 . + 1 Parent=GSCOCT00037960001 | |
| 1528 chr1 manual_curation CDS 1874541 1874655 . + 0 Parent=GSCOCT00037960001 | |
| 1529 chr1 manual_curation gene 1879599 1880252 . - . ID=GSCOCG00037956001;Name=Cc01_g01240 | |
| 1530 chr1 manual_curation mRNA 1879599 1880252 . - . ID=GSCOCT00037956001;Parent=GSCOCG00037956001;Name=Cc01_g01240 | |
| 1531 chr1 manual_curation polypeptide 1879599 1879802 . - . ID=GSCOCP00037956001;Derives_from=GSCOCT00037956001;Name=Cc01_g01240;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037956001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1300904..1301107;owner=coffea | |
| 1532 chr1 manual_curation exon 1879599 1880252 . - . Parent=GSCOCT00037956001 | |
| 1533 chr1 manual_curation CDS 1879599 1879802 . - 0 Parent=GSCOCT00037956001 | |
| 1534 chr1 manual_curation gene 1907356 1910025 . + . ID=GSCOCG00037952001;Name=Cc01_g01250 | |
| 1535 chr1 manual_curation mRNA 1907356 1910025 . + . ID=GSCOCT00037952001;Parent=GSCOCG00037952001;Name=Cc01_g01250 | |
| 1536 chr1 manual_curation polypeptide 1907356 1910025 . + . ID=GSCOCP00037952001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q7Y211,SwissProt:Q9LFL5,SwissProt:Q9SN39,TAIR:AT3G57430.1,TAIR:AT4G18750.1,TAIR:AT5G16860.1,TIGRFAMs:TIGR00756,TrEMBL:A9T8E9,TrEMBL:B8LQA8,TrEMBL:F5CAE2;Derives_from=GSCOCT00037952001;Name=Cc01_g01250;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Pentatricopeptide repeat-containing protein At5g16860,CC_functional_completeness:complete,CC_gene:PCMP-H92,CC_gene:PCMP-H45,CC_gene:PCMP-H81;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037952001~ Putative Pentatricopeptide repeat-containing protein At5g16860~ PCMP-H92~ complete;original_location=complement(join(1272947..1273350%2C1272558..1272874%2C1272157..1272377%2C1270681..1271952));owner=coffea | |
| 1537 chr1 manual_curation exon 1908754 1910025 . + . Parent=GSCOCT00037952001 | |
| 1538 chr1 manual_curation exon 1908329 1908549 . + . Parent=GSCOCT00037952001 | |
| 1539 chr1 manual_curation exon 1907832 1908148 . + . Parent=GSCOCT00037952001 | |
| 1540 chr1 manual_curation exon 1907356 1907759 . + . Parent=GSCOCT00037952001 | |
| 1541 chr1 manual_curation CDS 1908754 1910025 . + 0 Parent=GSCOCT00037952001 | |
| 1542 chr1 manual_curation CDS 1908329 1908549 . + 1 Parent=GSCOCT00037952001 | |
| 1543 chr1 manual_curation CDS 1907832 1908148 . + 2 Parent=GSCOCT00037952001 | |
| 1544 chr1 manual_curation CDS 1907356 1907759 . + 0 Parent=GSCOCT00037952001 | |
| 1545 chr1 manual_curation gene 2005275 2005760 . + . ID=GSCOCG00037944001;Name=Cc01_g01260 | |
| 1546 chr1 manual_curation mRNA 2005275 2005760 . + . ID=GSCOCT00037944001;Parent=GSCOCG00037944001;Name=Cc01_g01260 | |
| 1547 chr1 manual_curation polypeptide 2005275 2005760 . + . ID=GSCOCP00037944001;Dbxref=TAIR:AT2G19360.1,TAIR:AT2G44250.1,TAIR:AT3G13510.1,TrEMBL:B9N6K9,TrEMBL:B9T0D6,TrEMBL:Q5VPU9;Derives_from=GSCOCT00037944001;Name=Cc01_g01260;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of Unknown Function (DUF239),CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037944001~ Protein of Unknown Function (DUF239)~ unknown_gene~ fragment;original_location=complement(join(1175345..1175431%2C1174946..1175080));owner=coffea | |
| 1548 chr1 manual_curation exon 2005626 2005760 . + . Parent=GSCOCT00037944001 | |
| 1549 chr1 manual_curation exon 2005275 2005361 . + . Parent=GSCOCT00037944001 | |
| 1550 chr1 manual_curation CDS 2005626 2005760 . + 0 Parent=GSCOCT00037944001 | |
| 1551 chr1 manual_curation CDS 2005275 2005361 . + 0 Parent=GSCOCT00037944001 | |
| 1552 chr1 manual_curation gene 2007706 2010165 . + . ID=GSCOCG00037943001;Name=Cc01_g01270 | |
| 1553 chr1 manual_curation mRNA 2007706 2010165 . + . ID=GSCOCT00037943001;Parent=GSCOCG00037943001;Name=Cc01_g01270 | |
| 1554 chr1 manual_curation polypeptide 2007706 2010165 . + . ID=GSCOCP00037943001;Dbxref=InterPro:IPR004314,PFAM:PF03080,TAIR:AT1G55360.1,TAIR:AT3G13510.1,TAIR:AT5G56530.1,TrEMBL:F2CZX3,TrEMBL:F2D8Z1,TrEMBL:I1GT61;Derives_from=GSCOCT00037943001;Name=Cc01_g01270;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of Unknown Function (DUF239),CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037943001~ Putative Protein of Unknown Function (DUF239)~ unknown_gene~ fragment;original_location=complement(join(1172947..1173000%2C1172735..1172881%2C1172657..1172694%2C1172230..1172414%2C1170541..1170692));owner=coffea | |
| 1555 chr1 manual_curation exon 2010014 2010165 . + . Parent=GSCOCT00037943001 | |
| 1556 chr1 manual_curation exon 2008292 2008476 . + . Parent=GSCOCT00037943001 | |
| 1557 chr1 manual_curation exon 2008012 2008049 . + . Parent=GSCOCT00037943001 | |
| 1558 chr1 manual_curation exon 2007825 2007971 . + . Parent=GSCOCT00037943001 | |
| 1559 chr1 manual_curation exon 2007706 2007759 . + . Parent=GSCOCT00037943001 | |
| 1560 chr1 manual_curation CDS 2010014 2010165 . + 1 Parent=GSCOCT00037943001 | |
| 1561 chr1 manual_curation CDS 2008292 2008476 . + 2 Parent=GSCOCT00037943001 | |
| 1562 chr1 manual_curation CDS 2008012 2008049 . + 0 Parent=GSCOCT00037943001 | |
| 1563 chr1 manual_curation CDS 2007825 2007971 . + 0 Parent=GSCOCT00037943001 | |
| 1564 chr1 manual_curation CDS 2007706 2007759 . + 0 Parent=GSCOCT00037943001 | |
| 1565 chr1 manual_curation gene 2011861 2012361 . - . ID=GSCOCG00037942001;Name=Cc01_g01280 | |
| 1566 chr1 manual_curation mRNA 2011861 2012361 . - . ID=GSCOCT00037942001;Parent=GSCOCG00037942001;Name=Cc01_g01280 | |
| 1567 chr1 manual_curation polypeptide 2011861 2012361 . - . ID=GSCOCP00037942001;Dbxref=GENE3D:G3DSA:4.10.1110.10,InterPro:IPR000058,InterPro:IPR002653,PFAM:PF01428,PFAM:PF01754,PROFILE:PS51036,PROFILE:PS51039,SMART:SM00154,SMART:SM00259,SwissProt:O49663,SwissProt:Q6NNI8,SwissProt:Q9SZ69,TAIR:AT1G12440.1,TAIR:AT4G12040.1,TAIR:AT4G22820.1,TrEMBL:B9GKT2,TrEMBL:C4NAL8,TrEMBL:D7M0D7;Derives_from=GSCOCT00037942001;Name=Cc01_g01280;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Zinc finger A20 and AN1 domain-containing stress-associated protein 7,CC_functional_completeness:complete,CC_gene:SAP7,CC_gene:SAP9,CC_gene:SAP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037942001~ Zinc finger A20 and AN1 domain-containing stress-associated protein 7~ SAP7~ complete;original_location=1168345..1168845;owner=coffea | |
| 1568 chr1 manual_curation exon 2011861 2012361 . - . Parent=GSCOCT00037942001 | |
| 1569 chr1 manual_curation CDS 2011861 2012361 . - 0 Parent=GSCOCT00037942001 | |
| 1570 chr1 manual_curation gene 2026998 2027210 . + . ID=GSCOCG00037937001;Name=Cc01_g01290 | |
| 1571 chr1 manual_curation mRNA 2026998 2027210 . + . ID=GSCOCT00037937001;Parent=GSCOCG00037937001;Name=Cc01_g01290 | |
| 1572 chr1 manual_curation polypeptide 2026998 2027210 . + . ID=GSCOCP00037937001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR001014,InterPro:IPR012677,InterPro:IPR012678,InterPro:IPR013025,PFAM:PF00276,PROSITE:PS00050,SUPERFAMILY:SSF54189,SwissProt:P62750,SwissProt:P62751,SwissProt:P62752;Derives_from=GSCOCT00037937001;Name=Cc01_g01290;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003723,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:60S ribosomal protein L23a,CC_functional_completeness:fragment,CC_gene:Rpl23a,CC_gene:RPL23A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037937001~ 60S ribosomal protein L23a~ Rpl23a~ fragment;original_location=complement(1153496..1153708);owner=coffea | |
| 1573 chr1 manual_curation exon 2026998 2027210 . + . Parent=GSCOCT00037937001 | |
| 1574 chr1 manual_curation CDS 2026998 2027210 . + 0 Parent=GSCOCT00037937001 | |
| 1575 chr1 manual_curation gene 2028260 2029633 . - . ID=GSCOCG00037936001;Name=Cc01_g01300 | |
| 1576 chr1 manual_curation mRNA 2028260 2029633 . - . ID=GSCOCT00037936001;Parent=GSCOCG00037936001;Name=Cc01_g01300 | |
| 1577 chr1 manual_curation polypeptide 2028260 2029255 . - . ID=GSCOCP00037936001;Dbxref=InterPro:IPR000626,InterPro:IPR001757,InterPro:IPR019955,InterPro:IPR019956,PANTHER:PTHR11939,PFAM:PF00240,PRINTS:PR00348,PROFILE:PS50053,SwissProt:Q9LF79,SwissProt:Q9LU41,SwissProt:Q9SZR1,TAIR:AT3G21180.1,TAIR:AT4G29900.1,TAIR:AT5G57110.1,TrEMBL:B9DH83,TrEMBL:I1MH50,TrEMBL:Q0WV19;Derives_from=GSCOCT00037936001;Name=Cc01_g01300;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006754,GO:0016020,CC_EC_number:3.6.3.8,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:ACA8,CC_gene:ACA9,CC_gene:ACA10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037936001~ Hypothetical protein~ ACA8~ missing_functional_completeness;original_location=join(1151451..1151690%2C1151873..1151962%2C1152330..1152446);owner=coffea | |
| 1578 chr1 manual_curation exon 2029016 2029633 . - . Parent=GSCOCT00037936001 | |
| 1579 chr1 manual_curation exon 2028744 2028833 . - . Parent=GSCOCT00037936001 | |
| 1580 chr1 manual_curation exon 2028260 2028376 . - . Parent=GSCOCT00037936001 | |
| 1581 chr1 manual_curation CDS 2029016 2029255 . - 0 Parent=GSCOCT00037936001 | |
| 1582 chr1 manual_curation CDS 2028744 2028833 . - 0 Parent=GSCOCT00037936001 | |
| 1583 chr1 manual_curation CDS 2028260 2028376 . - 0 Parent=GSCOCT00037936001 | |
| 1584 chr1 manual_curation gene 2073759 2074082 . + . ID=GSCOCG00037929001;Name=Cc01_g01310 | |
| 1585 chr1 manual_curation mRNA 2073759 2074082 . + . ID=GSCOCT00037929001;Parent=GSCOCG00037929001;Name=Cc01_g01310 | |
| 1586 chr1 manual_curation polypeptide 2073759 2074082 . + . ID=GSCOCP00037929001;Dbxref=SwissProt:P16002,TrEMBL:B9R8G0;Derives_from=GSCOCT00037929001;Name=Cc01_g01310;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:PETE;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037929001~ Hypothetical protein~ PETE~ missing_functional_completeness;original_location=complement(1106624..1106947);owner=coffea | |
| 1587 chr1 manual_curation exon 2073759 2074082 . + . Parent=GSCOCT00037929001 | |
| 1588 chr1 manual_curation CDS 2073759 2074082 . + 0 Parent=GSCOCT00037929001 | |
| 1589 chr1 manual_curation gene 2074133 2074264 . + . ID=GSCOCG00037928001;Name=Cc01_g01320 | |
| 1590 chr1 manual_curation mRNA 2074133 2074264 . + . ID=GSCOCT00037928001;Parent=GSCOCG00037928001;Name=Cc01_g01320 | |
| 1591 chr1 manual_curation polypeptide 2074133 2074264 . + . ID=GSCOCP00037928001;Dbxref=GENE3D:G3DSA:2.60.40.420,InterPro:IPR000923,InterPro:IPR008972,PFAM:PF00127,PROSITE:PS00196,SUPERFAMILY:SSF49503,SwissProt:P00290,SwissProt:P17340,TAIR:AT1G20340.1,TAIR:AT1G76100.1,TrEMBL:B9R8G0;Derives_from=GSCOCT00037928001;Name=Cc01_g01320;Ontology_term=CC_evidence_code:ISS,GO:0005507,GO:0009055,CC_EC_number:missing_EC_number,PRODUCT:Plastocyanin%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:PETE;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037928001~ Plastocyanin%2C chloroplastic~ PETE~ fragment;original_location=complement(1106442..1106573);owner=coffea | |
| 1592 chr1 manual_curation exon 2074133 2074264 . + . Parent=GSCOCT00037928001 | |
| 1593 chr1 manual_curation CDS 2074133 2074264 . + 0 Parent=GSCOCT00037928001 | |
| 1594 chr1 manual_curation gene 2084420 2087032 . + . ID=GSCOCG00037926001;Name=Cc01_g01330 | |
| 1595 chr1 manual_curation mRNA 2084420 2087032 . + . ID=GSCOCT00037926001;Parent=GSCOCG00037926001;Name=Cc01_g01330 | |
| 1596 chr1 manual_curation polypeptide 2084420 2086856 . + . ID=GSCOCP00037926001;Dbxref=InterPro:IPR001810,InterPro:IPR006566,InterPro:IPR013101,InterPro:IPR013596,InterPro:IPR022364,PFAM:PF00646,PFAM:PF07723,PFAM:PF08387,PROFILE:PS50181,SMART:SM00579,SUPERFAMILY:SSF81383,SwissProt:Q0V7P8,SwissProt:Q9FZ52,SwissProt:Q9ZV93,TAIR:AT1G16930.1,TAIR:AT1G78750.1,TAIR:AT5G27750.1,TrEMBL:A5BLF6,TrEMBL:D7KEK4,TrEMBL:D7M5H8;Derives_from=GSCOCT00037926001;Name=Cc01_g01330;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative F-box/FBD/LRR-repeat protein At1g16930,CC_functional_completeness:complete,CC_gene:At1g16930,CC_gene:At5g27750,CC_gene:At1g78750;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037926001~ Putative F-box/FBD/LRR-repeat protein At1g16930~ At1g16930~ complete;original_location=complement(join(1095225..1096286%2C1094240..1094401%2C1093850..1094161));owner=coffea | |
| 1597 chr1 manual_curation exon 2086545 2087032 . + . Parent=GSCOCT00037926001 | |
| 1598 chr1 manual_curation exon 2086305 2086466 . + . Parent=GSCOCT00037926001 | |
| 1599 chr1 manual_curation exon 2084420 2085481 . + . Parent=GSCOCT00037926001 | |
| 1600 chr1 manual_curation CDS 2086545 2086856 . + 0 Parent=GSCOCT00037926001 | |
| 1601 chr1 manual_curation CDS 2086305 2086466 . + 0 Parent=GSCOCT00037926001 | |
| 1602 chr1 manual_curation CDS 2084420 2085481 . + 0 Parent=GSCOCT00037926001 | |
| 1603 chr1 manual_curation gene 2093514 2095187 . - . ID=GSCOCG00037925001;Name=Cc01_g01340 | |
| 1604 chr1 manual_curation mRNA 2093514 2095187 . - . ID=GSCOCT00037925001;Parent=GSCOCG00037925001;Name=Cc01_g01340 | |
| 1605 chr1 manual_curation polypeptide 2093514 2093855 . - . ID=GSCOCP00037925001;Dbxref=InterPro:IPR002182,PFAM:PF00931;Derives_from=GSCOCT00037925001;Name=Cc01_g01340;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037925001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1086851..1087192;owner=coffea | |
| 1606 chr1 manual_curation exon 2093514 2095187 . - . Parent=GSCOCT00037925001 | |
| 1607 chr1 manual_curation CDS 2093514 2093855 . - 0 Parent=GSCOCT00037925001 | |
| 1608 chr1 manual_curation gene 2095254 2097079 . + . ID=GSCOCG00037924001;Name=Cc01_g01350 | |
| 1609 chr1 manual_curation mRNA 2095254 2097079 . + . ID=GSCOCT00037924001;Parent=GSCOCG00037924001;Name=Cc01_g01350 | |
| 1610 chr1 manual_curation polypeptide 2095254 2096784 . + . ID=GSCOCP00037924001;Dbxref=InterPro:IPR006566,InterPro:IPR013101,InterPro:IPR013596,PFAM:PF07723,PFAM:PF08387,SMART:SM00579,SwissProt:Q0V7P8,SwissProt:Q9FNJ4,SwissProt:Q9ZV93,TAIR:AT1G78750.1,TAIR:AT5G22670.1,TAIR:AT5G27750.1,TrEMBL:A5BLF6,TrEMBL:D7M5H8,TrEMBL:F6HR85;Derives_from=GSCOCT00037924001;Name=Cc01_g01350;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:At5g22670,CC_gene:At1g78750,CC_gene:At5g27750;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037924001~ Putative uncharacterized protein~ At5g22670~ fragment;original_location=complement(join(1084622..1085452%2C1084342..1084503%2C1083922..1084263));owner=coffea | |
| 1611 chr1 manual_curation exon 2096443 2097079 . + . Parent=GSCOCT00037924001 | |
| 1612 chr1 manual_curation exon 2096203 2096364 . + . Parent=GSCOCT00037924001 | |
| 1613 chr1 manual_curation exon 2095254 2096084 . + . Parent=GSCOCT00037924001 | |
| 1614 chr1 manual_curation CDS 2096443 2096784 . + 0 Parent=GSCOCT00037924001 | |
| 1615 chr1 manual_curation CDS 2096203 2096364 . + 0 Parent=GSCOCT00037924001 | |
| 1616 chr1 manual_curation CDS 2095254 2096084 . + 0 Parent=GSCOCT00037924001 | |
| 1617 chr1 manual_curation gene 2098821 2101485 . - . ID=GSCOCG00037923001;Name=Cc01_g01360 | |
| 1618 chr1 manual_curation mRNA 2098821 2101485 . - . ID=GSCOCT00037923001;Parent=GSCOCG00037923001;Name=Cc01_g01360 | |
| 1619 chr1 manual_curation polypeptide 2100106 2100351 . - . ID=GSCOCP00037923001;Derives_from=GSCOCT00037923001;Name=Cc01_g01360;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037923001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1080355..1080600;owner=coffea | |
| 1620 chr1 manual_curation exon 2098821 2101485 . - . Parent=GSCOCT00037923001 | |
| 1621 chr1 manual_curation CDS 2100106 2100351 . - 0 Parent=GSCOCT00037923001 | |
| 1622 chr1 manual_curation gene 2105468 2107958 . + . ID=GSCOCG00037921001;Name=Cc01_g01370 | |
| 1623 chr1 manual_curation mRNA 2105468 2107958 . + . ID=GSCOCT00037921001;Parent=GSCOCG00037921001;Name=Cc01_g01370 | |
| 1624 chr1 manual_curation polypeptide 2105876 2107627 . + . ID=GSCOCP00037921001;Dbxref=InterPro:IPR001810,InterPro:IPR006566,InterPro:IPR013596,InterPro:IPR022364,PFAM:PF00646,PFAM:PF08387,SMART:SM00579,SUPERFAMILY:SSF81383,SwissProt:Q94B46,SwissProt:Q9FZ52,SwissProt:Q9M8U4,TAIR:AT1G16930.1,TAIR:AT3G03030.1,TAIR:AT4G14096.1,TrEMBL:A5BLF6,TrEMBL:D7M5H8,TrEMBL:F6HR85;Derives_from=GSCOCT00037921001;Name=Cc01_g01370;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative F-box/FBD/LRR-repeat protein At1g16930,CC_functional_completeness:complete,CC_gene:At1g16930,CC_gene:At4g14096,CC_gene:At3g03030;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037921001~ Putative F-box/FBD/LRR-repeat protein At1g16930~ At1g16930~ complete;original_location=complement(join(1074252..1074830%2C1073771..1074157%2C1073490..1073651%2C1073079..1073411));owner=coffea | |
| 1625 chr1 manual_curation exon 2107295 2107958 . + . Parent=GSCOCT00037921001 | |
| 1626 chr1 manual_curation exon 2107055 2107216 . + . Parent=GSCOCT00037921001 | |
| 1627 chr1 manual_curation exon 2106549 2106935 . + . Parent=GSCOCT00037921001 | |
| 1628 chr1 manual_curation exon 2105468 2106454 . + . Parent=GSCOCT00037921001 | |
| 1629 chr1 manual_curation CDS 2107295 2107627 . + 0 Parent=GSCOCT00037921001 | |
| 1630 chr1 manual_curation CDS 2107055 2107216 . + 0 Parent=GSCOCT00037921001 | |
| 1631 chr1 manual_curation CDS 2106549 2106935 . + 0 Parent=GSCOCT00037921001 | |
| 1632 chr1 manual_curation CDS 2105876 2106454 . + 0 Parent=GSCOCT00037921001 | |
| 1633 chr1 manual_curation gene 2116719 2117339 . - . ID=GSCOCG00037919001;Name=Cc01_g01380 | |
| 1634 chr1 manual_curation mRNA 2116719 2117339 . - . ID=GSCOCT00037919001;Parent=GSCOCG00037919001;Name=Cc01_g01380 | |
| 1635 chr1 manual_curation polypeptide 2116719 2117339 . - . ID=GSCOCP00037919001;Dbxref=InterPro:IPR000916,PFAM:PF00407,TrEMBL:B9I002,TrEMBL:B9N590,TrEMBL:B9T645;Derives_from=GSCOCT00037919001;Name=Cc01_g01380;Ontology_term=CC_evidence_code:ISS,GO:0006952,GO:0009607,CC_EC_number:missing_EC_number,PRODUCT:Predicted protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037919001~ Predicted protein~ unknown_gene~ complete;original_location=join(1063367..1063547%2C1063704..1063987);owner=coffea | |
| 1636 chr1 manual_curation exon 2117159 2117339 . - . Parent=GSCOCT00037919001 | |
| 1637 chr1 manual_curation exon 2116719 2117002 . - . Parent=GSCOCT00037919001 | |
| 1638 chr1 manual_curation CDS 2117159 2117339 . - 0 Parent=GSCOCT00037919001 | |
| 1639 chr1 manual_curation CDS 2116719 2117002 . - 1 Parent=GSCOCT00037919001 | |
| 1640 chr1 manual_curation gene 2168731 2173196 . + . ID=GSCOCG00037914001;Name=Cc01_g01390 | |
| 1641 chr1 manual_curation mRNA 2168731 2173196 . + . ID=GSCOCT00037914001;Parent=GSCOCG00037914001;Name=Cc01_g01390 | |
| 1642 chr1 manual_curation polypeptide 2169158 2170893 . + . ID=GSCOCP00037914001;Dbxref=InterPro:IPR001810,InterPro:IPR006566,InterPro:IPR013596,InterPro:IPR022364,PFAM:PF00646,PFAM:PF08387,SMART:SM00579,SUPERFAMILY:SSF81383,SwissProt:Q9FZ52,SwissProt:Q9ZV93,SwissProt:Q9ZV94,TAIR:AT1G16930.1,TAIR:AT1G78750.1,TAIR:AT1G78760.1,TrEMBL:A5BLF6,TrEMBL:D7M5H8,TrEMBL:F6HR85;Derives_from=GSCOCT00037914001;Name=Cc01_g01390;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative F-box/FBD/LRR-repeat protein At1g16930,CC_functional_completeness:complete,CC_gene:At1g16930,CC_gene:At1g78750,CC_gene:At1g78760;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037914001~ Putative F-box/FBD/LRR-repeat protein At1g16930~ At1g16930~ complete;original_location=complement(join(1010481..1011548%2C1010194..1010355%2C1009813..1010115));owner=coffea | |
| 1643 chr1 manual_curation exon 2172590 2173196 . + . Parent=GSCOCT00037914001 | |
| 1644 chr1 manual_curation exon 2170591 2171125 . + . Parent=GSCOCT00037914001 | |
| 1645 chr1 manual_curation exon 2170351 2170512 . + . Parent=GSCOCT00037914001 | |
| 1646 chr1 manual_curation exon 2168731 2170225 . + . Parent=GSCOCT00037914001 | |
| 1647 chr1 manual_curation CDS 2170591 2170893 . + 0 Parent=GSCOCT00037914001 | |
| 1648 chr1 manual_curation CDS 2170351 2170512 . + 0 Parent=GSCOCT00037914001 | |
| 1649 chr1 manual_curation CDS 2169158 2170225 . + 0 Parent=GSCOCT00037914001 | |
| 1650 chr1 manual_curation gene 2174778 2176700 . + . ID=GSCOCG00037912001;Name=Cc01_g01400 | |
| 1651 chr1 manual_curation mRNA 2174778 2176700 . + . ID=GSCOCT00037912001;Parent=GSCOCG00037912001;Name=Cc01_g01400 | |
| 1652 chr1 manual_curation polypeptide 2174778 2176506 . + . ID=GSCOCP00037912001;Dbxref=InterPro:IPR001810,InterPro:IPR006566,InterPro:IPR013596,InterPro:IPR022364,PFAM:PF00646,PFAM:PF08387,PROFILE:PS50181,SMART:SM00579,SUPERFAMILY:SSF81383,SwissProt:Q1PED9,SwissProt:Q94B46,SwissProt:Q9LXR4,TAIR:AT3G58880.1,TAIR:AT3G59190.1,TAIR:AT4G14096.1,TrEMBL:A0MF35,TrEMBL:A5BLF6,TrEMBL:F6HR85;Derives_from=GSCOCT00037912001;Name=Cc01_g01400;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative F-box/LRR-repeat protein At3g59190,CC_functional_completeness:modules,CC_gene:At3g59190,CC_gene:At4g14096,CC_gene:At3g58880;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037912001~ Putative F-box/LRR-repeat protein At3g59190~ At3g59190~ modules;original_location=complement(join(1004858..1005928%2C1004575..1004745%2C1004200..1004493));owner=coffea | |
| 1653 chr1 manual_curation exon 2176213 2176700 . + . Parent=GSCOCT00037912001 | |
| 1654 chr1 manual_curation exon 2175961 2176131 . + . Parent=GSCOCT00037912001 | |
| 1655 chr1 manual_curation exon 2174778 2175848 . + . Parent=GSCOCT00037912001 | |
| 1656 chr1 manual_curation CDS 2176213 2176506 . + 0 Parent=GSCOCT00037912001 | |
| 1657 chr1 manual_curation CDS 2175961 2176131 . + 0 Parent=GSCOCT00037912001 | |
| 1658 chr1 manual_curation CDS 2174778 2175848 . + 0 Parent=GSCOCT00037912001 | |
| 1659 chr1 manual_curation gene 2177035 2178669 . + . ID=GSCOCG00037911001;Name=Cc01_g01410 | |
| 1660 chr1 manual_curation mRNA 2177035 2178669 . + . ID=GSCOCT00037911001;Parent=GSCOCG00037911001;Name=Cc01_g01410 | |
| 1661 chr1 manual_curation polypeptide 2177035 2178342 . + . ID=GSCOCP00037911001;Derives_from=GSCOCT00037911001;Name=Cc01_g01410;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037911001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1003496..1003671%2C1002685..1002774%2C1002364..1002439));owner=coffea | |
| 1662 chr1 manual_curation exon 2178267 2178669 . + . Parent=GSCOCT00037911001 | |
| 1663 chr1 manual_curation exon 2177932 2178021 . + . Parent=GSCOCT00037911001 | |
| 1664 chr1 manual_curation exon 2177035 2177210 . + . Parent=GSCOCT00037911001 | |
| 1665 chr1 manual_curation CDS 2178267 2178342 . + 2 Parent=GSCOCT00037911001 | |
| 1666 chr1 manual_curation CDS 2177932 2178021 . + 2 Parent=GSCOCT00037911001 | |
| 1667 chr1 manual_curation CDS 2177035 2177210 . + 0 Parent=GSCOCT00037911001 | |
| 1668 chr1 manual_curation gene 2183557 2186202 . - . ID=GSCOCG00037910001;Name=Cc01_g01420 | |
| 1669 chr1 manual_curation mRNA 2183557 2186202 . - . ID=GSCOCT00037910001;Parent=GSCOCG00037910001;Name=Cc01_g01420 | |
| 1670 chr1 manual_curation polypeptide 2183884 2185641 . - . ID=GSCOCP00037910001;Dbxref=InterPro:IPR001810,InterPro:IPR006566,InterPro:IPR013596,InterPro:IPR022364,PFAM:PF00646,PFAM:PF08387,PROFILE:PS50181,SMART:SM00579,SUPERFAMILY:SSF81383,SwissProt:Q8L7H1,SwissProt:Q9FZ52,SwissProt:Q9ZV93,TAIR:AT1G16930.1,TAIR:AT1G78750.1,TAIR:AT4G14103.2,TrEMBL:A5BLF6,TrEMBL:F4JUK8,TrEMBL:F6HR85;Derives_from=GSCOCT00037910001;Name=Cc01_g01420;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative F-box/FBD/LRR-repeat protein At1g78750,CC_functional_completeness:complete,CC_gene:At1g78750,CC_gene:At1g16930,CC_gene:At4g14103;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037910001~ Putative F-box/FBD/LRR-repeat protein At1g78750~ At1g78750~ complete;original_location=join(995065..996129%2C996249..996410%2C996490..996822);owner=coffea | |
| 1671 chr1 manual_curation exon 2184577 2186202 . - . Parent=GSCOCT00037910001 | |
| 1672 chr1 manual_curation exon 2184296 2184457 . - . Parent=GSCOCT00037910001 | |
| 1673 chr1 manual_curation exon 2183557 2184216 . - . Parent=GSCOCT00037910001 | |
| 1674 chr1 manual_curation CDS 2184577 2185641 . - 0 Parent=GSCOCT00037910001 | |
| 1675 chr1 manual_curation CDS 2184296 2184457 . - 0 Parent=GSCOCT00037910001 | |
| 1676 chr1 manual_curation CDS 2183884 2184216 . - 0 Parent=GSCOCT00037910001 | |
| 1677 chr1 manual_curation gene 2188266 2192559 . - . ID=GSCOCG00037909001;Name=Cc01_g01430 | |
| 1678 chr1 manual_curation mRNA 2188266 2192559 . - . ID=GSCOCT00037909001;Parent=GSCOCG00037909001;Name=Cc01_g01430 | |
| 1679 chr1 manual_curation polypeptide 2188461 2191627 . - . ID=GSCOCP00037909001;Dbxref=InterPro:IPR002035,InterPro:IPR004595,InterPro:IPR007198,InterPro:IPR012170,PFAM:PF04056,PFAM:PF07975,PIR:PIRSF015919,PROFILE:PS50234,SMART:SM00327,SwissProt:A0JN27,SwissProt:Q2TBV5,SwissProt:Q86KZ2,TAIR:AT1G05055.1,TIGRFAMs:TIGR00622,TrEMBL:B9N7M5,TrEMBL:F6GTZ1,TrEMBL:G7L5Y2;Derives_from=GSCOCT00037909001;Name=Cc01_g01430;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0006281,GO:0008270,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative General transcription factor IIH subunit 2,CC_functional_completeness:complete,CC_gene:gtf2h2,CC_gene:GTF2H2,CC_gene:Gtf2h2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037909001~ Putative General transcription factor IIH subunit 2~ gtf2h2~ complete;original_location=join(989079..989369%2C989904..990365%2C990756..991128%2C992097..992245);owner=coffea | |
| 1680 chr1 manual_curation exon 2192372 2192559 . - . Parent=GSCOCT00037909001 | |
| 1681 chr1 manual_curation exon 2191337 2191645 . - . Parent=GSCOCT00037909001 | |
| 1682 chr1 manual_curation exon 2190341 2190802 . - . Parent=GSCOCT00037909001 | |
| 1683 chr1 manual_curation exon 2189578 2189950 . - . Parent=GSCOCT00037909001 | |
| 1684 chr1 manual_curation exon 2188266 2188609 . - . Parent=GSCOCT00037909001 | |
| 1685 chr1 manual_curation CDS 2191337 2191627 . - 0 Parent=GSCOCT00037909001 | |
| 1686 chr1 manual_curation CDS 2190341 2190802 . - 0 Parent=GSCOCT00037909001 | |
| 1687 chr1 manual_curation CDS 2189578 2189950 . - 0 Parent=GSCOCT00037909001 | |
| 1688 chr1 manual_curation CDS 2188461 2188609 . - 1 Parent=GSCOCT00037909001 | |
| 1689 chr1 manual_curation gene 2193236 2196663 . - . ID=GSCOCG00037908001;Name=Cc01_g01440 | |
| 1690 chr1 manual_curation mRNA 2193236 2196663 . - . ID=GSCOCT00037908001;Parent=GSCOCG00037908001;Name=Cc01_g01440 | |
| 1691 chr1 manual_curation polypeptide 2193907 2196457 . - . ID=GSCOCP00037908001;Dbxref=InterPro:IPR005123,PFAM:PF03171,SwissProt:Q43383,SwissProt:Q84MB3,SwissProt:Q9LTH8,TAIR:AT1G55290.1,TAIR:AT3G12900.1,TAIR:AT3G13610.1,TrEMBL:B9H637,TrEMBL:D7SZ09,TrEMBL:D7SZ13;Derives_from=GSCOCT00037908001;Name=Cc01_g01440;Ontology_term=CC_evidence_code:ISS,GO:0016491,CC_EC_number:1.14.11.9,PRODUCT:Putative 1-aminocyclopropane-1-carboxylate oxidase homolog 1,CC_functional_completeness:complete,CC_gene:At1g06620,CC_gene:2A6,CC_gene:At5g59530;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037908001~ Putative 1-aminocyclopropane-1-carboxylate oxidase homolog 1~ At1g06620~ complete;original_location=join(984249..984757%2C985231..985576%2C986548..986799);owner=coffea | |
| 1692 chr1 manual_curation exon 2195949 2196663 . - . Parent=GSCOCT00037908001 | |
| 1693 chr1 manual_curation exon 2195130 2195475 . - . Parent=GSCOCT00037908001 | |
| 1694 chr1 manual_curation exon 2193236 2194158 . - . Parent=GSCOCT00037908001 | |
| 1695 chr1 manual_curation CDS 2195949 2196457 . - 0 Parent=GSCOCT00037908001 | |
| 1696 chr1 manual_curation CDS 2195130 2195475 . - 2 Parent=GSCOCT00037908001 | |
| 1697 chr1 manual_curation CDS 2193907 2194158 . - 0 Parent=GSCOCT00037908001 | |
| 1698 chr1 manual_curation gene 2208057 2209802 . - . ID=GSCOCG00037907001;Name=Cc01_g01450 | |
| 1699 chr1 manual_curation mRNA 2208057 2209802 . - . ID=GSCOCT00037907001;Parent=GSCOCG00037907001;Name=Cc01_g01450 | |
| 1700 chr1 manual_curation polypeptide 2208057 2209715 . - . ID=GSCOCP00037907001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,PROSITE:PS00375,SwissProt:O22820,SwissProt:O22822,SwissProt:Q9SYK9,TAIR:AT1G05680.1,TAIR:AT2G43820.1,TAIR:AT2G43840.2,TrEMBL:B6EWX8,TrEMBL:F6H7U4,TrEMBL:Q9M6E7;Derives_from=GSCOCT00037907001;Name=Cc01_g01450;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.121,PRODUCT:Putative UDP-glycosyltransferase 74F2,CC_functional_completeness:complete,CC_gene:UGT74F2,CC_gene:UGT74E2,CC_gene:UGT74F1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037907001~ Putative UDP-glycosyltransferase 74F2~ UGT74F2~ complete;original_location=join(970991..971623%2C971927..972649);owner=coffea | |
| 1701 chr1 manual_curation exon 2209083 2209802 . - . Parent=GSCOCT00037907001 | |
| 1702 chr1 manual_curation exon 2208057 2208779 . - . Parent=GSCOCT00037907001 | |
| 1703 chr1 manual_curation CDS 2209083 2209715 . - 0 Parent=GSCOCT00037907001 | |
| 1704 chr1 manual_curation CDS 2208057 2208779 . - 0 Parent=GSCOCT00037907001 | |
| 1705 chr1 manual_curation gene 2271805 2274480 . + . ID=GSCOCG00037906001;Name=Cc01_g01460 | |
| 1706 chr1 manual_curation mRNA 2271805 2274480 . + . ID=GSCOCT00037906001;Parent=GSCOCG00037906001;Name=Cc01_g01460 | |
| 1707 chr1 manual_curation polypeptide 2271805 2274480 . + . ID=GSCOCP00037906001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,SwissProt:O22820,SwissProt:O22822,SwissProt:O48676,TAIR:AT1G24100.1,TAIR:AT2G43820.1,TAIR:AT2G43840.2,TrEMBL:B6EWX8,TrEMBL:F6HRI4,TrEMBL:Q9M6E7;Derives_from=GSCOCT00037906001;Name=Cc01_g01460;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.121,PRODUCT:Putative UDP-glycosyltransferase 74F2,CC_functional_completeness:complete,CC_gene:UGT74F2,CC_gene:UGT74B1,CC_gene:UGT74F1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037906001~ Putative UDP-glycosyltransferase 74F2~ UGT74F2~ complete;original_location=complement(join(908734..908901%2C908384..908655%2C908282..908314%2C906857..906944%2C906483..906689%2C906226..906414));owner=coffea | |
| 1708 chr1 manual_curation exon 2274292 2274480 . + . Parent=GSCOCT00037906001 | |
| 1709 chr1 manual_curation exon 2274017 2274223 . + . Parent=GSCOCT00037906001 | |
| 1710 chr1 manual_curation exon 2273762 2273849 . + . Parent=GSCOCT00037906001 | |
| 1711 chr1 manual_curation exon 2272392 2272424 . + . Parent=GSCOCT00037906001 | |
| 1712 chr1 manual_curation exon 2272051 2272322 . + . Parent=GSCOCT00037906001 | |
| 1713 chr1 manual_curation exon 2271805 2271972 . + . Parent=GSCOCT00037906001 | |
| 1714 chr1 manual_curation CDS 2274292 2274480 . + 0 Parent=GSCOCT00037906001 | |
| 1715 chr1 manual_curation CDS 2274017 2274223 . + 0 Parent=GSCOCT00037906001 | |
| 1716 chr1 manual_curation CDS 2273762 2273849 . + 2 Parent=GSCOCT00037906001 | |
| 1717 chr1 manual_curation CDS 2272392 2272424 . + 2 Parent=GSCOCT00037906001 | |
| 1718 chr1 manual_curation CDS 2272051 2272322 . + 0 Parent=GSCOCT00037906001 | |
| 1719 chr1 manual_curation CDS 2271805 2271972 . + 0 Parent=GSCOCT00037906001 | |
| 1720 chr1 manual_curation gene 2300180 2301840 . - . ID=GSCOCG00037904001;Name=Cc01_g01470 | |
| 1721 chr1 manual_curation mRNA 2300180 2301840 . - . ID=GSCOCT00037904001;Parent=GSCOCG00037904001;Name=Cc01_g01470 | |
| 1722 chr1 manual_curation polypeptide 2300180 2301840 . - . ID=GSCOCP00037904001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,SwissProt:O22822,SwissProt:P0C7P7,SwissProt:Q9SYK9,TAIR:AT1G05675.1,TAIR:AT1G05680.1,TAIR:AT2G43820.1,TrEMBL:B6EWX8,TrEMBL:F6H7U4,TrEMBL:Q9M6E7;Derives_from=GSCOCT00037904001;Name=Cc01_g01470;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.121,PRODUCT:Putative UDP-glycosyltransferase 74F2,CC_functional_completeness:complete,CC_gene:UGT74F2,CC_gene:UGT74E2,CC_gene:UGT74E1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037904001~ Putative UDP-glycosyltransferase 74F2~ UGT74F2~ complete;original_location=join(878866..879498%2C879804..880073%2C880161..880526);owner=coffea | |
| 1723 chr1 manual_curation exon 2301208 2301840 . - . Parent=GSCOCT00037904001 | |
| 1724 chr1 manual_curation exon 2300633 2300902 . - . Parent=GSCOCT00037904001 | |
| 1725 chr1 manual_curation exon 2300180 2300545 . - . Parent=GSCOCT00037904001 | |
| 1726 chr1 manual_curation CDS 2301208 2301840 . - 0 Parent=GSCOCT00037904001 | |
| 1727 chr1 manual_curation CDS 2300633 2300902 . - 0 Parent=GSCOCT00037904001 | |
| 1728 chr1 manual_curation CDS 2300180 2300545 . - 0 Parent=GSCOCT00037904001 | |
| 1729 chr1 manual_curation gene 2311525 2311659 . - . ID=GSCOCG00037903001;Name=Cc01_g01480 | |
| 1730 chr1 manual_curation mRNA 2311525 2311659 . - . ID=GSCOCT00037903001;Parent=GSCOCG00037903001;Name=Cc01_g01480 | |
| 1731 chr1 manual_curation polypeptide 2311525 2311659 . - . ID=GSCOCP00037903001;Derives_from=GSCOCT00037903001;Name=Cc01_g01480;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037903001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=869047..869181;owner=coffea | |
| 1732 chr1 manual_curation exon 2311525 2311659 . - . Parent=GSCOCT00037903001 | |
| 1733 chr1 manual_curation CDS 2311525 2311659 . - 0 Parent=GSCOCT00037903001 | |
| 1734 chr1 manual_curation gene 2332992 2343390 . - . ID=GSCOCG00037900001;Name=Cc01_g01490 | |
| 1735 chr1 manual_curation mRNA 2332992 2343390 . - . ID=GSCOCT00037900001;Parent=GSCOCG00037900001;Name=Cc01_g01490 | |
| 1736 chr1 manual_curation polypeptide 2333832 2343390 . - . ID=GSCOCP00037900001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,PROSITE:PS00375,SwissProt:O22822,SwissProt:P0C7P7,SwissProt:Q9SYK9,TAIR:AT1G05675.1,TAIR:AT1G05680.1,TAIR:AT2G43820.1,TrEMBL:B6EWX5,TrEMBL:B6EWX8,TrEMBL:F6HAY4;Derives_from=GSCOCT00037900001;Name=Cc01_g01490;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.121,PRODUCT:Putative UDP-glycosyltransferase 74E2,CC_functional_completeness:complete,CC_gene:UGT74E2,CC_gene:UGT74E1,CC_gene:UGT74F2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037900001~ Putative UDP-glycosyltransferase 74E2~ UGT74E2~ complete;original_location=join(837316..837948%2C838322..838427%2C838518..839037%2C840020..840039%2C845743..846173%2C846513..846779%2C846842..846874);owner=coffea | |
| 1737 chr1 manual_curation exon 2342758 2343390 . - . Parent=GSCOCT00037900001 | |
| 1738 chr1 manual_curation exon 2342279 2342384 . - . Parent=GSCOCT00037900001 | |
| 1739 chr1 manual_curation exon 2341669 2342188 . - . Parent=GSCOCT00037900001 | |
| 1740 chr1 manual_curation exon 2340667 2340686 . - . Parent=GSCOCT00037900001 | |
| 1741 chr1 manual_curation exon 2334533 2334963 . - . Parent=GSCOCT00037900001 | |
| 1742 chr1 manual_curation exon 2333927 2334193 . - . Parent=GSCOCT00037900001 | |
| 1743 chr1 manual_curation exon 2332992 2333864 . - . Parent=GSCOCT00037900001 | |
| 1744 chr1 manual_curation CDS 2342758 2343390 . - 0 Parent=GSCOCT00037900001 | |
| 1745 chr1 manual_curation CDS 2342279 2342384 . - 0 Parent=GSCOCT00037900001 | |
| 1746 chr1 manual_curation CDS 2341669 2342188 . - 1 Parent=GSCOCT00037900001 | |
| 1747 chr1 manual_curation CDS 2340667 2340686 . - 2 Parent=GSCOCT00037900001 | |
| 1748 chr1 manual_curation CDS 2334533 2334963 . - 1 Parent=GSCOCT00037900001 | |
| 1749 chr1 manual_curation CDS 2333927 2334193 . - 0 Parent=GSCOCT00037900001 | |
| 1750 chr1 manual_curation CDS 2333832 2333864 . - 0 Parent=GSCOCT00037900001 | |
| 1751 chr1 manual_curation gene 2353759 2356212 . + . ID=GSCOCG00037898001;Name=Cc01_g01500 | |
| 1752 chr1 manual_curation mRNA 2353759 2356212 . + . ID=GSCOCT00037898001;Parent=GSCOCG00037898001;Name=Cc01_g01500 | |
| 1753 chr1 manual_curation polypeptide 2353759 2356212 . + . ID=GSCOCP00037898001;Dbxref=InterPro:IPR004314,PFAM:PF03080,TAIR:AT1G55360.1,TAIR:AT3G13510.1,TAIR:AT5G56530.1,TrEMBL:B4G0L1,TrEMBL:B6U8T6,TrEMBL:B9GLD1;Derives_from=GSCOCT00037898001;Name=Cc01_g01500;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of Unknown Function (DUF239),CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037898001~ Putative Protein of Unknown Function (DUF239)~ unknown_gene~ fragment;original_location=complement(join(826894..826947%2C826778..826840%2C826469..826555%2C826123..826266%2C825922..825969%2C825459..825617%2C825287..825340%2C824763..824945%2C824494..824586));owner=coffea | |
| 1754 chr1 manual_curation exon 2356120 2356212 . + . Parent=GSCOCT00037898001 | |
| 1755 chr1 manual_curation exon 2355761 2355943 . + . Parent=GSCOCT00037898001 | |
| 1756 chr1 manual_curation exon 2355366 2355419 . + . Parent=GSCOCT00037898001 | |
| 1757 chr1 manual_curation exon 2355089 2355247 . + . Parent=GSCOCT00037898001 | |
| 1758 chr1 manual_curation exon 2354737 2354784 . + . Parent=GSCOCT00037898001 | |
| 1759 chr1 manual_curation exon 2354440 2354583 . + . Parent=GSCOCT00037898001 | |
| 1760 chr1 manual_curation exon 2354151 2354237 . + . Parent=GSCOCT00037898001 | |
| 1761 chr1 manual_curation exon 2353866 2353928 . + . Parent=GSCOCT00037898001 | |
| 1762 chr1 manual_curation exon 2353759 2353812 . + . Parent=GSCOCT00037898001 | |
| 1763 chr1 manual_curation CDS 2356120 2356212 . + 0 Parent=GSCOCT00037898001 | |
| 1764 chr1 manual_curation CDS 2355761 2355943 . + 0 Parent=GSCOCT00037898001 | |
| 1765 chr1 manual_curation CDS 2355366 2355419 . + 0 Parent=GSCOCT00037898001 | |
| 1766 chr1 manual_curation CDS 2355089 2355247 . + 0 Parent=GSCOCT00037898001 | |
| 1767 chr1 manual_curation CDS 2354737 2354784 . + 0 Parent=GSCOCT00037898001 | |
| 1768 chr1 manual_curation CDS 2354440 2354583 . + 0 Parent=GSCOCT00037898001 | |
| 1769 chr1 manual_curation CDS 2354151 2354237 . + 0 Parent=GSCOCT00037898001 | |
| 1770 chr1 manual_curation CDS 2353866 2353928 . + 0 Parent=GSCOCT00037898001 | |
| 1771 chr1 manual_curation CDS 2353759 2353812 . + 0 Parent=GSCOCT00037898001 | |
| 1772 chr1 manual_curation gene 2360146 2361991 . + . ID=GSCOCG00037897001;Name=Cc01_g01510 | |
| 1773 chr1 manual_curation mRNA 2360146 2361991 . + . ID=GSCOCT00037897001;Parent=GSCOCG00037897001;Name=Cc01_g01510 | |
| 1774 chr1 manual_curation polypeptide 2360146 2361887 . + . ID=GSCOCP00037897001;Dbxref=InterPro:IPR006566,InterPro:IPR013101,InterPro:IPR013596,InterPro:IPR022364,PFAM:PF07723,PFAM:PF08387,SMART:SM00579,SUPERFAMILY:SSF81383,SwissProt:Q56YH2,SwissProt:Q94B46,SwissProt:Q9FNJ4,TAIR:AT4G14096.1,TAIR:AT5G18780.1,TAIR:AT5G22670.1,TrEMBL:A5BLF6,TrEMBL:F6HR85,TrEMBL:F6HR88;Derives_from=GSCOCT00037897001;Name=Cc01_g01510;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative F-box/FBD/LRR-repeat protein At5g22670,CC_functional_completeness:complete,CC_gene:At5g22670,CC_gene:At4g14096,CC_gene:At5g18780;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037897001~ Putative F-box/FBD/LRR-repeat protein At5g22670~ At5g22670~ complete;original_location=complement(join(819547..820560%2C819297..819443%2C818819..819178));owner=coffea | |
| 1775 chr1 manual_curation exon 2361528 2361991 . + . Parent=GSCOCT00037897001 | |
| 1776 chr1 manual_curation exon 2361263 2361409 . + . Parent=GSCOCT00037897001 | |
| 1777 chr1 manual_curation exon 2360146 2361159 . + . Parent=GSCOCT00037897001 | |
| 1778 chr1 manual_curation CDS 2361528 2361887 . + 0 Parent=GSCOCT00037897001 | |
| 1779 chr1 manual_curation CDS 2361263 2361409 . + 0 Parent=GSCOCT00037897001 | |
| 1780 chr1 manual_curation CDS 2360146 2361159 . + 0 Parent=GSCOCT00037897001 | |
| 1781 chr1 manual_curation gene 2382404 2385643 . + . ID=GSCOCG00037895001;Name=Cc01_g01520 | |
| 1782 chr1 manual_curation mRNA 2382404 2385643 . + . ID=GSCOCT00037895001;Parent=GSCOCG00037895001;Name=Cc01_g01520 | |
| 1783 chr1 manual_curation polypeptide 2383613 2385362 . + . ID=GSCOCP00037895001;Dbxref=InterPro:IPR001810,InterPro:IPR006566,InterPro:IPR013101,InterPro:IPR013596,InterPro:IPR022364,PFAM:PF00646,PFAM:PF07723,PFAM:PF08387,SMART:SM00579,SUPERFAMILY:SSF81383,SwissProt:Q8H1R7,SwissProt:Q94B46,SwissProt:Q9FNJ4,TAIR:AT1G55660.1,TAIR:AT4G26340.1,TAIR:AT5G22670.1,TrEMBL:A5BLF6,TrEMBL:F6HR85,TrEMBL:F6HR88;Derives_from=GSCOCT00037895001;Name=Cc01_g01520;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative F-box/FBD/LRR-repeat protein At5g22670,CC_functional_completeness:complete,CC_gene:At5g22670,CC_gene:At4g26340,CC_gene:At4g14096;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037895001~ Putative F-box/FBD/LRR-repeat protein At5g22670~ At5g22670~ complete;original_location=complement(join(796080..797093%2C795830..795976%2C795344..795706));owner=coffea | |
| 1784 chr1 manual_curation exon 2385000 2385643 . + . Parent=GSCOCT00037895001 | |
| 1785 chr1 manual_curation exon 2384730 2384876 . + . Parent=GSCOCT00037895001 | |
| 1786 chr1 manual_curation exon 2382404 2384626 . + . Parent=GSCOCT00037895001 | |
| 1787 chr1 manual_curation CDS 2385000 2385362 . + 0 Parent=GSCOCT00037895001 | |
| 1788 chr1 manual_curation CDS 2384730 2384876 . + 0 Parent=GSCOCT00037895001 | |
| 1789 chr1 manual_curation CDS 2383613 2384626 . + 0 Parent=GSCOCT00037895001 | |
| 1790 chr1 manual_curation gene 2408977 2409915 . + . ID=GSCOCG00037894001;Name=Cc01_g01530 | |
| 1791 chr1 manual_curation mRNA 2408977 2409915 . + . ID=GSCOCT00037894001;Parent=GSCOCG00037894001;Name=Cc01_g01530 | |
| 1792 chr1 manual_curation polypeptide 2408977 2409915 . + . ID=GSCOCP00037894001;Dbxref=InterPro:IPR006904,PANTHER:PTHR16007,PFAM:PF04819,TAIR:AT1G55230.1,TAIR:AT1G55240.1,TAIR:AT5G19870.1,TrEMBL:B9GYI2,TrEMBL:D7TFC3,TrEMBL:I1KN80;Derives_from=GSCOCT00037894001;Name=Cc01_g01530;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Family of unknown function (DUF716) ,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037894001~ Family of unknown function (DUF716) ~ unknown_gene~ complete;original_location=complement(770791..771729);owner=coffea | |
| 1793 chr1 manual_curation exon 2408977 2409915 . + . Parent=GSCOCT00037894001 | |
| 1794 chr1 manual_curation CDS 2408977 2409915 . + 0 Parent=GSCOCT00037894001 | |
| 1795 chr1 manual_curation gene 2424524 2434732 . + . ID=GSCOCG00037893001;Name=Cc01_g01540 | |
| 1796 chr1 manual_curation mRNA 2424524 2434732 . + . ID=GSCOCT00037893001;Parent=GSCOCG00037893001;Name=Cc01_g01540 | |
| 1797 chr1 manual_curation polypeptide 2424636 2434563 . + . ID=GSCOCP00037893001;Dbxref=InterPro:IPR001841,InterPro:IPR017907,PROFILE:PS50089,PROSITE:PS00518,SMART:SM00184,SwissProt:A2ZAC2,SwissProt:Q336R3,SwissProt:Q9C895,TAIR:AT1G55250.1,TAIR:AT2G44950.1,TrEMBL:B9SY00,TrEMBL:D7SLF9,TrEMBL:F4I079;Derives_from=GSCOCT00037893001;Name=Cc01_g01540;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:E3 ubiquitin-protein ligase BRE1-like 2,CC_functional_completeness:complete,CC_gene:HUB2,CC_gene:BRE1B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037893001~ E3 ubiquitin-protein ligase BRE1-like 2~ HUB2~ complete;original_location=complement(join(756002..756070%2C754726..754887%2C754546..754633%2C754193..754423%2C753905..754072%2C753451..753644%2C753206..753289%2C752934..753053%2C752657..752843%2C752416..752576%2C751558..751629%2C751351..751427%2C748849..749043%2C748145..748217%2C747943..748029%2C747709..747846%2C747439..747641%2C746489..746651%2C746143..746274));owner=coffea | |
| 1798 chr1 manual_curation exon 2434432 2434732 . + . Parent=GSCOCT00037893001 | |
| 1799 chr1 manual_curation exon 2434055 2434217 . + . Parent=GSCOCT00037893001 | |
| 1800 chr1 manual_curation exon 2433065 2433267 . + . Parent=GSCOCT00037893001 | |
| 1801 chr1 manual_curation exon 2432860 2432997 . + . Parent=GSCOCT00037893001 | |
| 1802 chr1 manual_curation exon 2432677 2432763 . + . Parent=GSCOCT00037893001 | |
| 1803 chr1 manual_curation exon 2432489 2432561 . + . Parent=GSCOCT00037893001 | |
| 1804 chr1 manual_curation exon 2431663 2431857 . + . Parent=GSCOCT00037893001 | |
| 1805 chr1 manual_curation exon 2429279 2429355 . + . Parent=GSCOCT00037893001 | |
| 1806 chr1 manual_curation exon 2429077 2429148 . + . Parent=GSCOCT00037893001 | |
| 1807 chr1 manual_curation exon 2428130 2428290 . + . Parent=GSCOCT00037893001 | |
| 1808 chr1 manual_curation exon 2427863 2428049 . + . Parent=GSCOCT00037893001 | |
| 1809 chr1 manual_curation exon 2427653 2427772 . + . Parent=GSCOCT00037893001 | |
| 1810 chr1 manual_curation exon 2427417 2427500 . + . Parent=GSCOCT00037893001 | |
| 1811 chr1 manual_curation exon 2427062 2427255 . + . Parent=GSCOCT00037893001 | |
| 1812 chr1 manual_curation exon 2426634 2426801 . + . Parent=GSCOCT00037893001 | |
| 1813 chr1 manual_curation exon 2426283 2426513 . + . Parent=GSCOCT00037893001 | |
| 1814 chr1 manual_curation exon 2426073 2426160 . + . Parent=GSCOCT00037893001 | |
| 1815 chr1 manual_curation exon 2425819 2425980 . + . Parent=GSCOCT00037893001 | |
| 1816 chr1 manual_curation exon 2424524 2424704 . + . Parent=GSCOCT00037893001 | |
| 1817 chr1 manual_curation CDS 2434432 2434563 . + 0 Parent=GSCOCT00037893001 | |
| 1818 chr1 manual_curation CDS 2434055 2434217 . + 2 Parent=GSCOCT00037893001 | |
| 1819 chr1 manual_curation CDS 2433065 2433267 . + 0 Parent=GSCOCT00037893001 | |
| 1820 chr1 manual_curation CDS 2432860 2432997 . + 0 Parent=GSCOCT00037893001 | |
| 1821 chr1 manual_curation CDS 2432677 2432763 . + 0 Parent=GSCOCT00037893001 | |
| 1822 chr1 manual_curation CDS 2432489 2432561 . + 2 Parent=GSCOCT00037893001 | |
| 1823 chr1 manual_curation CDS 2431663 2431857 . + 2 Parent=GSCOCT00037893001 | |
| 1824 chr1 manual_curation CDS 2429279 2429355 . + 0 Parent=GSCOCT00037893001 | |
| 1825 chr1 manual_curation CDS 2429077 2429148 . + 0 Parent=GSCOCT00037893001 | |
| 1826 chr1 manual_curation CDS 2428130 2428290 . + 1 Parent=GSCOCT00037893001 | |
| 1827 chr1 manual_curation CDS 2427863 2428049 . + 0 Parent=GSCOCT00037893001 | |
| 1828 chr1 manual_curation CDS 2427653 2427772 . + 0 Parent=GSCOCT00037893001 | |
| 1829 chr1 manual_curation CDS 2427417 2427500 . + 0 Parent=GSCOCT00037893001 | |
| 1830 chr1 manual_curation CDS 2427062 2427255 . + 1 Parent=GSCOCT00037893001 | |
| 1831 chr1 manual_curation CDS 2426634 2426801 . + 1 Parent=GSCOCT00037893001 | |
| 1832 chr1 manual_curation CDS 2426283 2426513 . + 1 Parent=GSCOCT00037893001 | |
| 1833 chr1 manual_curation CDS 2426073 2426160 . + 0 Parent=GSCOCT00037893001 | |
| 1834 chr1 manual_curation CDS 2425819 2425980 . + 0 Parent=GSCOCT00037893001 | |
| 1835 chr1 manual_curation CDS 2424636 2424704 . + 0 Parent=GSCOCT00037893001 | |
| 1836 chr1 manual_curation gene 2436149 2440541 . + . ID=GSCOCG00037891001;Name=Cc01_g01550 | |
| 1837 chr1 manual_curation mRNA 2436149 2440541 . + . ID=GSCOCT00037891001;Parent=GSCOCG00037891001;Name=Cc01_g01550 | |
| 1838 chr1 manual_curation polypeptide 2436361 2440239 . + . ID=GSCOCP00037891001;Dbxref=TAIR:AT3G32930.1,TrEMBL:B9SY01,TrEMBL:D7LP88,TrEMBL:D7SLG0;Derives_from=GSCOCT00037891001;Name=Cc01_g01550;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037891001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=complement(join(743991..744345%2C743839..743904%2C740759..740931%2C740467..740661));owner=coffea | |
| 1839 chr1 manual_curation exon 2440045 2440541 . + . Parent=GSCOCT00037891001 | |
| 1840 chr1 manual_curation exon 2439775 2439947 . + . Parent=GSCOCT00037891001 | |
| 1841 chr1 manual_curation exon 2436802 2436867 . + . Parent=GSCOCT00037891001 | |
| 1842 chr1 manual_curation exon 2436149 2436715 . + . Parent=GSCOCT00037891001 | |
| 1843 chr1 manual_curation CDS 2440045 2440239 . + 0 Parent=GSCOCT00037891001 | |
| 1844 chr1 manual_curation CDS 2439775 2439947 . + 1 Parent=GSCOCT00037891001 | |
| 1845 chr1 manual_curation CDS 2436802 2436867 . + 1 Parent=GSCOCT00037891001 | |
| 1846 chr1 manual_curation CDS 2436361 2436715 . + 0 Parent=GSCOCT00037891001 | |
| 1847 chr1 manual_curation gene 2444953 2445840 . + . ID=GSCOCG00037890001;Name=Cc01_g01560 | |
| 1848 chr1 manual_curation mRNA 2444953 2445840 . + . ID=GSCOCT00037890001;Parent=GSCOCG00037890001;Name=Cc01_g01560 | |
| 1849 chr1 manual_curation polypeptide 2444953 2445840 . + . ID=GSCOCP00037890001;Dbxref=InterPro:IPR006904,PANTHER:PTHR16007,PFAM:PF04819,TAIR:AT1G55230.1,TAIR:AT1G55240.1,TAIR:AT5G19870.1,TrEMBL:B9GLI7,TrEMBL:B9GYI2,TrEMBL:D7TFC3;Derives_from=GSCOCT00037890001;Name=Cc01_g01560;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Family of unknown function (DUF716) ,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037890001~ Family of unknown function (DUF716) ~ unknown_gene~ complete;original_location=complement(734866..735753);owner=coffea | |
| 1850 chr1 manual_curation exon 2444953 2445840 . + . Parent=GSCOCT00037890001 | |
| 1851 chr1 manual_curation CDS 2444953 2445840 . + 0 Parent=GSCOCT00037890001 | |
| 1852 chr1 manual_curation gene 2483208 2483960 . - . ID=GSCOCG00037885001;Name=Cc01_g01570 | |
| 1853 chr1 manual_curation mRNA 2483208 2483960 . - . ID=GSCOCT00037885001;Parent=GSCOCG00037885001;Name=Cc01_g01570 | |
| 1854 chr1 manual_curation polypeptide 2483208 2483960 . - . ID=GSCOCP00037885001;Dbxref=InterPro:IPR006904,PANTHER:PTHR16007,PFAM:PF04819,TAIR:AT1G55230.1,TAIR:AT1G55240.1,TAIR:AT5G19870.1,TrEMBL:B9GLI7,TrEMBL:B9GYI3,TrEMBL:D7TFC3;Derives_from=GSCOCT00037885001;Name=Cc01_g01570;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Family of unknown function (DUF716) ,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037885001~ Family of unknown function (DUF716) ~ unknown_gene~ complete;original_location=696746..697498;owner=coffea | |
| 1855 chr1 manual_curation exon 2483208 2483960 . - . Parent=GSCOCT00037885001 | |
| 1856 chr1 manual_curation CDS 2483208 2483960 . - 0 Parent=GSCOCT00037885001 | |
| 1857 chr1 manual_curation gene 2513095 2513430 . + . ID=GSCOCG00037882001;Name=Cc01_g01580 | |
| 1858 chr1 manual_curation mRNA 2513095 2513430 . + . ID=GSCOCT00037882001;Parent=GSCOCG00037882001;Name=Cc01_g01580 | |
| 1859 chr1 manual_curation polypeptide 2513095 2513430 . + . ID=GSCOCP00037882001;Derives_from=GSCOCT00037882001;Name=Cc01_g01580;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037882001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(667539..667611%2C667276..667439));owner=coffea | |
| 1860 chr1 manual_curation exon 2513267 2513430 . + . Parent=GSCOCT00037882001 | |
| 1861 chr1 manual_curation exon 2513095 2513167 . + . Parent=GSCOCT00037882001 | |
| 1862 chr1 manual_curation CDS 2513267 2513430 . + 1 Parent=GSCOCT00037882001 | |
| 1863 chr1 manual_curation CDS 2513095 2513167 . + 0 Parent=GSCOCT00037882001 | |
| 1864 chr1 manual_curation gene 2513993 2515398 . + . ID=GSCOCG00037881001;Name=Cc01_g01590 | |
| 1865 chr1 manual_curation mRNA 2513993 2515398 . + . ID=GSCOCT00037881001;Parent=GSCOCG00037881001;Name=Cc01_g01590 | |
| 1866 chr1 manual_curation polypeptide 2513993 2515398 . + . ID=GSCOCP00037881001;Dbxref=InterPro:IPR005299,PFAM:PF03492,SwissProt:Q84PP7,SwissProt:Q8H0G0,SwissProt:Q9AVJ9,TAIR:AT3G11480.1,TAIR:AT5G04370.2,TAIR:AT5G66430.1,TrEMBL:Q4U5S1,TrEMBL:Q7FRH9,TrEMBL:Q8RVM1;Derives_from=GSCOCT00037881001;Name=Cc01_g01590;Ontology_term=CC_evidence_code:ISS,GO:0008168,CC_EC_number:2.1.1.141,PRODUCT:Putative Monomethylxanthine methyltransferase 1,CC_functional_completeness:fragment,CC_gene:MXMT1,CC_gene:CTS2,CC_gene:MXMT2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037881001~ Putative Monomethylxanthine methyltransferase 1~ MXMT1~ fragment;original_location=complement(join(666525..666713%2C665747..665983%2C665308..665673));owner=coffea | |
| 1867 chr1 manual_curation exon 2515033 2515398 . + . Parent=GSCOCT00037881001 | |
| 1868 chr1 manual_curation exon 2514723 2514959 . + . Parent=GSCOCT00037881001 | |
| 1869 chr1 manual_curation exon 2513993 2514181 . + . Parent=GSCOCT00037881001 | |
| 1870 chr1 manual_curation CDS 2515033 2515398 . + 0 Parent=GSCOCT00037881001 | |
| 1871 chr1 manual_curation CDS 2514723 2514959 . + 0 Parent=GSCOCT00037881001 | |
| 1872 chr1 manual_curation CDS 2513993 2514181 . + 0 Parent=GSCOCT00037881001 | |
| 1873 chr1 manual_curation gene 2520456 2525052 . - . ID=GSCOCG00037879001;Name=Cc01_g01600 | |
| 1874 chr1 manual_curation mRNA 2520456 2525052 . - . ID=GSCOCT00037879001;Parent=GSCOCG00037879001;Name=Cc01_g01600 | |
| 1875 chr1 manual_curation polypeptide 2520456 2525052 . - . ID=GSCOCP00037879001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q7XA40,SwissProt:Q7XA42,SwissProt:Q7XBQ9,TAIR:AT1G59780.1,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TrEMBL:B9IBB8,TrEMBL:B9NBB7,TrEMBL:B9NFN7;Derives_from=GSCOCT00037879001;Name=Cc01_g01600;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance protein RGA3,CC_functional_completeness:complete,CC_gene:RGA3,CC_gene:RGA1,CC_gene:RGA2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037879001~ Putative disease resistance protein RGA3~ RGA3~ complete;original_location=join(655654..655996%2C656066..657493%2C657683..658117%2C658211..658442%2C658524..659377%2C659468..659487%2C660110..660250);owner=coffea | |
| 1876 chr1 manual_curation exon 2524710 2525052 . - . Parent=GSCOCT00037879001 | |
| 1877 chr1 manual_curation exon 2523213 2524640 . - . Parent=GSCOCT00037879001 | |
| 1878 chr1 manual_curation exon 2522589 2523023 . - . Parent=GSCOCT00037879001 | |
| 1879 chr1 manual_curation exon 2522264 2522495 . - . Parent=GSCOCT00037879001 | |
| 1880 chr1 manual_curation exon 2521329 2522182 . - . Parent=GSCOCT00037879001 | |
| 1881 chr1 manual_curation exon 2521219 2521238 . - . Parent=GSCOCT00037879001 | |
| 1882 chr1 manual_curation exon 2520456 2520596 . - . Parent=GSCOCT00037879001 | |
| 1883 chr1 manual_curation CDS 2524710 2525052 . - 0 Parent=GSCOCT00037879001 | |
| 1884 chr1 manual_curation CDS 2523213 2524640 . - 1 Parent=GSCOCT00037879001 | |
| 1885 chr1 manual_curation CDS 2522589 2523023 . - 1 Parent=GSCOCT00037879001 | |
| 1886 chr1 manual_curation CDS 2522264 2522495 . - 1 Parent=GSCOCT00037879001 | |
| 1887 chr1 manual_curation CDS 2521329 2522182 . - 2 Parent=GSCOCT00037879001 | |
| 1888 chr1 manual_curation CDS 2521219 2521238 . - 1 Parent=GSCOCT00037879001 | |
| 1889 chr1 manual_curation CDS 2520456 2520596 . - 0 Parent=GSCOCT00037879001 | |
| 1890 chr1 manual_curation gene 2525547 2530112 . + . ID=GSCOCG00037878001;Name=Cc01_g01610 | |
| 1891 chr1 manual_curation mRNA 2525547 2530112 . + . ID=GSCOCT00037878001;Parent=GSCOCG00037878001;Name=Cc01_g01610 | |
| 1892 chr1 manual_curation polypeptide 2525547 2530112 . + . ID=GSCOCP00037878001;Dbxref=InterPro:IPR000873,InterPro:IPR020845,PFAM:PF00501,PROSITE:PS00455,SwissProt:F4HUK6,SwissProt:Q8VZF1,SwissProt:Q9SEY5,TAIR:AT1G20560.1,TAIR:AT2G17650.1,TAIR:AT3G16910.1,TrEMBL:B9H5H2,TrEMBL:B9R8M5,TrEMBL:F6I6S6;Derives_from=GSCOCT00037878001;Name=Cc01_g01610;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,CC_EC_number:6.2.1.26,PRODUCT:Probable acyl-activating enzyme 1%2C peroxisomal,CC_functional_completeness:fragment,CC_gene:AAE1,CC_gene:AAE2,CC_gene:AAE7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037878001~ Probable acyl-activating enzyme 1%2C peroxisomal~ AAE1~ fragment;original_location=complement(join(654958..655159%2C654558..654596%2C651838..652028%2C651642..651765%2C650594..651138));owner=coffea | |
| 1893 chr1 manual_curation exon 2529568 2530112 . + . Parent=GSCOCT00037878001 | |
| 1894 chr1 manual_curation exon 2528941 2529064 . + . Parent=GSCOCT00037878001 | |
| 1895 chr1 manual_curation exon 2528678 2528868 . + . Parent=GSCOCT00037878001 | |
| 1896 chr1 manual_curation exon 2526110 2526148 . + . Parent=GSCOCT00037878001 | |
| 1897 chr1 manual_curation exon 2525547 2525748 . + . Parent=GSCOCT00037878001 | |
| 1898 chr1 manual_curation CDS 2529568 2530112 . + 1 Parent=GSCOCT00037878001 | |
| 1899 chr1 manual_curation CDS 2528941 2529064 . + 0 Parent=GSCOCT00037878001 | |
| 1900 chr1 manual_curation CDS 2528678 2528868 . + 1 Parent=GSCOCT00037878001 | |
| 1901 chr1 manual_curation CDS 2526110 2526148 . + 1 Parent=GSCOCT00037878001 | |
| 1902 chr1 manual_curation CDS 2525547 2525748 . + 0 Parent=GSCOCT00037878001 | |
| 1903 chr1 manual_curation gene 2550149 2551207 . - . ID=GSCOCG00037876001;Name=Cc01_g01620 | |
| 1904 chr1 manual_curation mRNA 2550149 2551207 . - . ID=GSCOCT00037876001;Parent=GSCOCG00037876001;Name=Cc01_g01620 | |
| 1905 chr1 manual_curation polypeptide 2550350 2551207 . - . ID=GSCOCP00037876001;Dbxref=InterPro:IPR006904,PANTHER:PTHR16007,PFAM:PF04819,TAIR:AT1G55230.1,TAIR:AT1G55240.1,TAIR:AT5G19870.1,TrEMBL:B9GYI2,TrEMBL:D7TFC3,TrEMBL:I1KN80;Derives_from=GSCOCT00037876001;Name=Cc01_g01620;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Family of unknown function (DUF716) ,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037876001~ Family of unknown function (DUF716) ~ unknown_gene~ complete;original_location=629499..630356;owner=coffea | |
| 1906 chr1 manual_curation exon 2550149 2551207 . - . Parent=GSCOCT00037876001 | |
| 1907 chr1 manual_curation CDS 2550350 2551207 . - 0 Parent=GSCOCT00037876001 | |
| 1908 chr1 manual_curation gene 2556788 2568202 . - . ID=GSCOCG00037875001;Name=Cc01_g01630 | |
| 1909 chr1 manual_curation mRNA 2556788 2568202 . - . ID=GSCOCT00037875001;Parent=GSCOCG00037875001;Name=Cc01_g01630 | |
| 1910 chr1 manual_curation polypeptide 2556788 2566496 . - . ID=GSCOCP00037875001;Dbxref=InterPro:IPR004087,SMART:SM00322,SwissProt:Q15637,SwissProt:Q54BM5,SwissProt:Q64213,TAIR:AT3G32940.1,TAIR:AT5G51300.1,TrEMBL:B9GYI0,TrEMBL:B9SY02,TrEMBL:D7SLG1;Derives_from=GSCOCT00037875001;Name=Cc01_g01630;Ontology_term=CC_evidence_code:ISS,GO:0003723,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:sf1,CC_gene:SF1,CC_gene:Sf1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037875001~ Putative uncharacterized protein~ sf1~ complete;original_location=join(614210..614491%2C614867..614992%2C615063..615102%2C615201..615283%2C621475..621552%2C621666..621719%2C621939..622073%2C622212..622947%2C623047..623918);owner=coffea | |
| 1911 chr1 manual_curation exon 2568109 2568202 . - . Parent=GSCOCT00037875001 | |
| 1912 chr1 manual_curation exon 2566215 2566514 . - . Parent=GSCOCT00037875001 | |
| 1913 chr1 manual_curation exon 2565714 2565839 . - . Parent=GSCOCT00037875001 | |
| 1914 chr1 manual_curation exon 2565604 2565643 . - . Parent=GSCOCT00037875001 | |
| 1915 chr1 manual_curation exon 2565423 2565505 . - . Parent=GSCOCT00037875001 | |
| 1916 chr1 manual_curation exon 2559154 2559231 . - . Parent=GSCOCT00037875001 | |
| 1917 chr1 manual_curation exon 2558987 2559040 . - . Parent=GSCOCT00037875001 | |
| 1918 chr1 manual_curation exon 2558633 2558767 . - . Parent=GSCOCT00037875001 | |
| 1919 chr1 manual_curation exon 2557759 2558494 . - . Parent=GSCOCT00037875001 | |
| 1920 chr1 manual_curation exon 2556788 2557659 . - . Parent=GSCOCT00037875001 | |
| 1921 chr1 manual_curation CDS 2566215 2566496 . - 0 Parent=GSCOCT00037875001 | |
| 1922 chr1 manual_curation CDS 2565714 2565839 . - 0 Parent=GSCOCT00037875001 | |
| 1923 chr1 manual_curation CDS 2565604 2565643 . - 0 Parent=GSCOCT00037875001 | |
| 1924 chr1 manual_curation CDS 2565423 2565505 . - 1 Parent=GSCOCT00037875001 | |
| 1925 chr1 manual_curation CDS 2559154 2559231 . - 0 Parent=GSCOCT00037875001 | |
| 1926 chr1 manual_curation CDS 2558987 2559040 . - 0 Parent=GSCOCT00037875001 | |
| 1927 chr1 manual_curation CDS 2558633 2558767 . - 0 Parent=GSCOCT00037875001 | |
| 1928 chr1 manual_curation CDS 2557759 2558494 . - 0 Parent=GSCOCT00037875001 | |
| 1929 chr1 manual_curation CDS 2556788 2557659 . - 1 Parent=GSCOCT00037875001 | |
| 1930 chr1 manual_curation gene 2591536 2592397 . + . ID=GSCOCG00037869001;Name=Cc01_g01640 | |
| 1931 chr1 manual_curation mRNA 2591536 2592397 . + . ID=GSCOCT00037869001;Parent=GSCOCG00037869001;Name=Cc01_g01640 | |
| 1932 chr1 manual_curation polypeptide 2591536 2592397 . + . ID=GSCOCP00037869001;Dbxref=SwissProt:Q5W274,TAIR:AT1G15210.1,TAIR:AT2G37280.1,TrEMBL:A5BJT7,TrEMBL:F6I4H1,TrEMBL:G3FHD5;Derives_from=GSCOCT00037869001;Name=Cc01_g01640;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pleiotropic drug resistance protein 3,CC_functional_completeness:fragment,CC_gene:PDR3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037869001~ Pleiotropic drug resistance protein 3~ PDR3~ fragment;original_location=complement(join(589156..589170%2C588534..588626%2C588309..588455));owner=coffea | |
| 1933 chr1 manual_curation exon 2592251 2592397 . + . Parent=GSCOCT00037869001 | |
| 1934 chr1 manual_curation exon 2592080 2592172 . + . Parent=GSCOCT00037869001 | |
| 1935 chr1 manual_curation exon 2591536 2591550 . + . Parent=GSCOCT00037869001 | |
| 1936 chr1 manual_curation CDS 2592251 2592397 . + 0 Parent=GSCOCT00037869001 | |
| 1937 chr1 manual_curation CDS 2592080 2592172 . + 0 Parent=GSCOCT00037869001 | |
| 1938 chr1 manual_curation CDS 2591536 2591550 . + 0 Parent=GSCOCT00037869001 | |
| 1939 chr1 manual_curation gene 2608168 2625558 . + . ID=GSCOCG00037868001;Name=Cc01_g01650 | |
| 1940 chr1 manual_curation mRNA 2608168 2625558 . + . ID=GSCOCT00037868001;Parent=GSCOCG00037868001;Name=Cc01_g01650 | |
| 1941 chr1 manual_curation polypeptide 2609209 2625364 . + . ID=GSCOCP00037868001;Dbxref=InterPro:IPR009057,InterPro:IPR010561,PFAM:PF06584,SUPERFAMILY:SSF46689,SwissProt:Q6A331,SwissProt:Q6A332,SwissProt:Q6A333,TAIR:AT3G05380.2,TAIR:AT3G21430.2,TAIR:AT5G27610.1,TrEMBL:B9RT24,TrEMBL:D7L0S7,TrEMBL:F6HDG1;Derives_from=GSCOCT00037868001;Name=Cc01_g01650;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein ALWAYS EARLY 3,CC_functional_completeness:complete,CC_gene:ALY3,CC_gene:ALY2,CC_gene:ALY1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037868001~ Putative Protein ALWAYS EARLY 3~ ALY3~ complete;original_location=complement(join(571393..571497%2C570488..570586%2C570074..570136%2C569402..569479%2C567679..567862%2C567083..567324%2C566633..566978%2C565334..565411%2C564500..564777%2C564352..564408%2C561995..562300%2C561727..561905%2C561330..561612%2C560025..560249%2C558527..558679%2C557650..557766%2C557315..557533%2C556415..556519%2C556230..556328%2C555342..555506));owner=coffea | |
| 1942 chr1 manual_curation exon 2608472 2608508 . + . Parent=GSCOCT00037868001 | |
| 1943 chr1 manual_curation exon 2608168 2608358 . + . Parent=GSCOCT00037868001 | |
| 1944 chr1 manual_curation exon 2625200 2625558 . + . Parent=GSCOCT00037868001 | |
| 1945 chr1 manual_curation exon 2624378 2624476 . + . Parent=GSCOCT00037868001 | |
| 1946 chr1 manual_curation exon 2624187 2624291 . + . Parent=GSCOCT00037868001 | |
| 1947 chr1 manual_curation exon 2623173 2623391 . + . Parent=GSCOCT00037868001 | |
| 1948 chr1 manual_curation exon 2622940 2623056 . + . Parent=GSCOCT00037868001 | |
| 1949 chr1 manual_curation exon 2622027 2622179 . + . Parent=GSCOCT00037868001 | |
| 1950 chr1 manual_curation exon 2620457 2620681 . + . Parent=GSCOCT00037868001 | |
| 1951 chr1 manual_curation exon 2619094 2619376 . + . Parent=GSCOCT00037868001 | |
| 1952 chr1 manual_curation exon 2618801 2618979 . + . Parent=GSCOCT00037868001 | |
| 1953 chr1 manual_curation exon 2618406 2618711 . + . Parent=GSCOCT00037868001 | |
| 1954 chr1 manual_curation exon 2616298 2616354 . + . Parent=GSCOCT00037868001 | |
| 1955 chr1 manual_curation exon 2615929 2616206 . + . Parent=GSCOCT00037868001 | |
| 1956 chr1 manual_curation exon 2615295 2615372 . + . Parent=GSCOCT00037868001 | |
| 1957 chr1 manual_curation exon 2613728 2614073 . + . Parent=GSCOCT00037868001 | |
| 1958 chr1 manual_curation exon 2613382 2613623 . + . Parent=GSCOCT00037868001 | |
| 1959 chr1 manual_curation exon 2612844 2613027 . + . Parent=GSCOCT00037868001 | |
| 1960 chr1 manual_curation exon 2611227 2611304 . + . Parent=GSCOCT00037868001 | |
| 1961 chr1 manual_curation exon 2610570 2610632 . + . Parent=GSCOCT00037868001 | |
| 1962 chr1 manual_curation exon 2610120 2610218 . + . Parent=GSCOCT00037868001 | |
| 1963 chr1 manual_curation exon 2609190 2609313 . + . Parent=GSCOCT00037868001 | |
| 1964 chr1 manual_curation CDS 2625200 2625364 . + 0 Parent=GSCOCT00037868001 | |
| 1965 chr1 manual_curation CDS 2624378 2624476 . + 0 Parent=GSCOCT00037868001 | |
| 1966 chr1 manual_curation CDS 2624187 2624291 . + 0 Parent=GSCOCT00037868001 | |
| 1967 chr1 manual_curation CDS 2623173 2623391 . + 0 Parent=GSCOCT00037868001 | |
| 1968 chr1 manual_curation CDS 2622940 2623056 . + 0 Parent=GSCOCT00037868001 | |
| 1969 chr1 manual_curation CDS 2622027 2622179 . + 0 Parent=GSCOCT00037868001 | |
| 1970 chr1 manual_curation CDS 2620457 2620681 . + 0 Parent=GSCOCT00037868001 | |
| 1971 chr1 manual_curation CDS 2619094 2619376 . + 2 Parent=GSCOCT00037868001 | |
| 1972 chr1 manual_curation CDS 2618801 2618979 . + 0 Parent=GSCOCT00037868001 | |
| 1973 chr1 manual_curation CDS 2618406 2618711 . + 0 Parent=GSCOCT00037868001 | |
| 1974 chr1 manual_curation CDS 2616298 2616354 . + 0 Parent=GSCOCT00037868001 | |
| 1975 chr1 manual_curation CDS 2615929 2616206 . + 1 Parent=GSCOCT00037868001 | |
| 1976 chr1 manual_curation CDS 2615295 2615372 . + 1 Parent=GSCOCT00037868001 | |
| 1977 chr1 manual_curation CDS 2613728 2614073 . + 0 Parent=GSCOCT00037868001 | |
| 1978 chr1 manual_curation CDS 2613382 2613623 . + 1 Parent=GSCOCT00037868001 | |
| 1979 chr1 manual_curation CDS 2612844 2613027 . + 0 Parent=GSCOCT00037868001 | |
| 1980 chr1 manual_curation CDS 2611227 2611304 . + 0 Parent=GSCOCT00037868001 | |
| 1981 chr1 manual_curation CDS 2610570 2610632 . + 0 Parent=GSCOCT00037868001 | |
| 1982 chr1 manual_curation CDS 2610120 2610218 . + 0 Parent=GSCOCT00037868001 | |
| 1983 chr1 manual_curation CDS 2609209 2609313 . + 0 Parent=GSCOCT00037868001 | |
| 1984 chr1 manual_curation gene 2638418 2639680 . - . ID=GSCOCG00037867001;Name=Cc01_g01660 | |
| 1985 chr1 manual_curation mRNA 2638418 2639680 . - . ID=GSCOCT00037867001;Parent=GSCOCG00037867001;Name=Cc01_g01660 | |
| 1986 chr1 manual_curation polypeptide 2638418 2639680 . - . ID=GSCOCP00037867001;Dbxref=SwissProt:O65451,TAIR:AT4G04480.1,TAIR:AT4G22030.1,TrEMBL:A5AXW5,TrEMBL:F6H7H7,TrEMBL:F6H7I0;Derives_from=GSCOCT00037867001;Name=Cc01_g01660;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Probable F-box protein At4g22030,CC_functional_completeness:fragment,CC_gene:At4g22030;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037867001~ Probable F-box protein At4g22030~ At4g22030~ fragment;original_location=541026..542288;owner=coffea | |
| 1987 chr1 manual_curation exon 2638418 2639680 . - . Parent=GSCOCT00037867001 | |
| 1988 chr1 manual_curation CDS 2638418 2639680 . - 0 Parent=GSCOCT00037867001 | |
| 1989 chr1 manual_curation gene 2667789 2674198 . + . ID=GSCOCG00037865001;Name=Cc01_g01670 | |
| 1990 chr1 manual_curation mRNA 2667789 2674198 . + . ID=GSCOCT00037865001;Parent=GSCOCG00037865001;Name=Cc01_g01670 | |
| 1991 chr1 manual_curation polypeptide 2667789 2674198 . + . ID=GSCOCP00037865001;Dbxref=InterPro:IPR002182,PFAM:PF00931,SwissProt:Q7XA39,SwissProt:Q7XA40,SwissProt:Q7XBQ9,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TAIR:AT3G46730.1,TrEMBL:B9GZ62,TrEMBL:B9NED8,TrEMBL:B9P5D0;Derives_from=GSCOCT00037865001;Name=Cc01_g01670;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,CC_EC_number:missing_EC_number,PRODUCT:Putative Cc-nbs-lrr resistance protein,CC_functional_completeness:complete,CC_gene:RGA4,CC_gene:RGA2,CC_gene:RGA3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037865001~ Putative Cc-nbs-lrr resistance protein~ RGA4~ complete;original_location=complement(join(511417..512917%2C510609..511374%2C507163..508213%2C506508..506543));owner=coffea | |
| 1992 chr1 manual_curation exon 2674163 2674198 . + . Parent=GSCOCT00037865001 | |
| 1993 chr1 manual_curation exon 2672493 2673543 . + . Parent=GSCOCT00037865001 | |
| 1994 chr1 manual_curation exon 2669332 2670097 . + . Parent=GSCOCT00037865001 | |
| 1995 chr1 manual_curation exon 2667789 2669289 . + . Parent=GSCOCT00037865001 | |
| 1996 chr1 manual_curation CDS 2674163 2674198 . + 0 Parent=GSCOCT00037865001 | |
| 1997 chr1 manual_curation CDS 2672493 2673543 . + 2 Parent=GSCOCT00037865001 | |
| 1998 chr1 manual_curation CDS 2669332 2670097 . + 1 Parent=GSCOCT00037865001 | |
| 1999 chr1 manual_curation CDS 2667789 2669289 . + 0 Parent=GSCOCT00037865001 | |
| 2000 chr1 manual_curation gene 2674262 2675079 . + . ID=GSCOCG00037864001;Name=Cc01_g01680 | |
| 2001 chr1 manual_curation mRNA 2674262 2675079 . + . ID=GSCOCT00037864001;Parent=GSCOCG00037864001;Name=Cc01_g01680 | |
| 2002 chr1 manual_curation polypeptide 2674262 2675079 . + . ID=GSCOCP00037864001;Derives_from=GSCOCT00037864001;Name=Cc01_g01680;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037864001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(506401..506444%2C505627..505768));owner=coffea | |
| 2003 chr1 manual_curation exon 2674938 2675079 . + . Parent=GSCOCT00037864001 | |
| 2004 chr1 manual_curation exon 2674262 2674305 . + . Parent=GSCOCT00037864001 | |
| 2005 chr1 manual_curation CDS 2674938 2675079 . + 2 Parent=GSCOCT00037864001 | |
| 2006 chr1 manual_curation CDS 2674262 2674305 . + 0 Parent=GSCOCT00037864001 | |
| 2007 chr1 manual_curation gene 2675157 2675267 . + . ID=GSCOCG00037863001;Name=Cc01_g01690 | |
| 2008 chr1 manual_curation mRNA 2675157 2675267 . + . ID=GSCOCT00037863001;Parent=GSCOCG00037863001;Name=Cc01_g01690 | |
| 2009 chr1 manual_curation polypeptide 2675157 2675267 . + . ID=GSCOCP00037863001;Derives_from=GSCOCT00037863001;Name=Cc01_g01690;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037863001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(505439..505549);owner=coffea | |
| 2010 chr1 manual_curation exon 2675157 2675267 . + . Parent=GSCOCT00037863001 | |
| 2011 chr1 manual_curation CDS 2675157 2675267 . + 0 Parent=GSCOCT00037863001 | |
| 2012 chr1 manual_curation gene 2730496 2732883 . + . ID=GSCOCG00037859001;Name=Cc01_g01700 | |
| 2013 chr1 manual_curation mRNA 2730496 2732883 . + . ID=GSCOCT00037859001;Parent=GSCOCG00037859001;Name=Cc01_g01700 | |
| 2014 chr1 manual_curation polypeptide 2731546 2732883 . + . ID=GSCOCP00037859001;Dbxref=InterPro:IPR003480,PFAM:PF02458,SwissProt:Q70PR7,SwissProt:Q94FT4,SwissProt:Q9FI40,TAIR:AT3G26040.1,TAIR:AT3G30280.1,TAIR:AT4G15390.1,TrEMBL:B9GQ16,TrEMBL:B9H5H0,TrEMBL:B9R8I4;Derives_from=GSCOCT00037859001;Name=Cc01_g01700;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.3.1.150,PRODUCT:Putative Salutaridinol 7-O-acetyltransferase,CC_functional_completeness:complete,CC_gene:SALAT,CC_gene:ACT,CC_gene:BAHD1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037859001~ Putative Salutaridinol 7-O-acetyltransferase~ SALAT~ complete;original_location=complement(447823..449160);owner=coffea | |
| 2015 chr1 manual_curation exon 2730496 2730655 . + . Parent=GSCOCT00037859001 | |
| 2016 chr1 manual_curation exon 2731512 2732883 . + . Parent=GSCOCT00037859001 | |
| 2017 chr1 manual_curation CDS 2731546 2732883 . + 0 Parent=GSCOCT00037859001 | |
| 2018 chr1 manual_curation gene 2836265 2836918 . + . ID=GSCOCG00037858001;Name=Cc01_g01710 | |
| 2019 chr1 manual_curation mRNA 2836265 2836918 . + . ID=GSCOCT00037858001;Parent=GSCOCG00037858001;Name=Cc01_g01710 | |
| 2020 chr1 manual_curation polypeptide 2836265 2836918 . + . ID=GSCOCP00037858001;Dbxref=SwissProt:Q7XA39,TrEMBL:B9MYT6,TrEMBL:B9MYW7,TrEMBL:B9NED8;Derives_from=GSCOCT00037858001;Name=Cc01_g01710;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance protein RGA4,CC_functional_completeness:fragment,CC_gene:RGA4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037858001~ Putative disease resistance protein RGA4~ RGA4~ fragment;original_location=complement(343788..344441);owner=coffea | |
| 2021 chr1 manual_curation exon 2836265 2836918 . + . Parent=GSCOCT00037858001 | |
| 2022 chr1 manual_curation CDS 2836265 2836918 . + 0 Parent=GSCOCT00037858001 | |
| 2023 chr1 manual_curation gene 2836974 2838023 . + . ID=GSCOCG00037857001;Name=Cc01_g01720 | |
| 2024 chr1 manual_curation mRNA 2836974 2838023 . + . ID=GSCOCT00037857001;Parent=GSCOCG00037857001;Name=Cc01_g01720 | |
| 2025 chr1 manual_curation polypeptide 2836974 2838023 . + . ID=GSCOCP00037857001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q7XA39,SwissProt:Q7XA42,SwissProt:Q7XBQ9,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TAIR:AT3G50950.2,TrEMBL:Q2TSY9;Derives_from=GSCOCT00037857001;Name=Cc01_g01720;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance protein RGA1,CC_functional_completeness:fragment,CC_gene:RGA1,CC_gene:RGA2,CC_gene:RGA4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037857001~ Putative disease resistance protein RGA1~ RGA1~ fragment;original_location=complement(342683..343732);owner=coffea | |
| 2026 chr1 manual_curation exon 2836974 2838023 . + . Parent=GSCOCT00037857001 | |
| 2027 chr1 manual_curation CDS 2836974 2838023 . + 0 Parent=GSCOCT00037857001 | |
| 2028 chr1 manual_curation gene 2901448 2904595 . + . ID=GSCOCG00037856001;Name=Cc01_g01730 | |
| 2029 chr1 manual_curation mRNA 2901448 2904595 . + . ID=GSCOCT00037856001;Parent=GSCOCG00037856001;Name=Cc01_g01730 | |
| 2030 chr1 manual_curation polypeptide 2901448 2904595 . + . ID=GSCOCP00037856001;Dbxref=InterPro:IPR002182,PFAM:PF00931,SwissProt:Q7XA39,SwissProt:Q7XBQ9,SwissProt:Q9LRR4,TAIR:AT1G58400.1,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TrEMBL:B9GZ62,TrEMBL:B9NBC0,TrEMBL:B9P5D0;Derives_from=GSCOCT00037856001;Name=Cc01_g01730;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance protein RGA4,CC_functional_completeness:complete,CC_gene:RGA4,CC_gene:RGA2,CC_gene:RPPL1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037856001~ Putative disease resistance protein RGA4~ RGA4~ complete;original_location=complement(join(278655..279258%2C276844..278115%2C276584..276684%2C276208..276523%2C276111..276136));owner=coffea | |
| 2031 chr1 manual_curation exon 2904570 2904595 . + . Parent=GSCOCT00037856001 | |
| 2032 chr1 manual_curation exon 2904183 2904498 . + . Parent=GSCOCT00037856001 | |
| 2033 chr1 manual_curation exon 2904022 2904122 . + . Parent=GSCOCT00037856001 | |
| 2034 chr1 manual_curation exon 2902591 2903862 . + . Parent=GSCOCT00037856001 | |
| 2035 chr1 manual_curation exon 2901448 2902051 . + . Parent=GSCOCT00037856001 | |
| 2036 chr1 manual_curation CDS 2904570 2904595 . + 1 Parent=GSCOCT00037856001 | |
| 2037 chr1 manual_curation CDS 2904183 2904498 . + 0 Parent=GSCOCT00037856001 | |
| 2038 chr1 manual_curation CDS 2904022 2904122 . + 1 Parent=GSCOCT00037856001 | |
| 2039 chr1 manual_curation CDS 2902591 2903862 . + 1 Parent=GSCOCT00037856001 | |
| 2040 chr1 manual_curation CDS 2901448 2902051 . + 0 Parent=GSCOCT00037856001 | |
| 2041 chr1 manual_curation gene 2977459 2977653 . + . ID=GSCOCG00037854001;Name=Cc01_g01740 | |
| 2042 chr1 manual_curation mRNA 2977459 2977653 . + . ID=GSCOCT00037854001;Parent=GSCOCG00037854001;Name=Cc01_g01740 | |
| 2043 chr1 manual_curation polypeptide 2977459 2977653 . + . ID=GSCOCP00037854001;Dbxref=InterPro:IPR002182,PFAM:PF00931,TrEMBL:A7U1W3,TrEMBL:Q8GSU0,TrEMBL:Q8GSU7;Derives_from=GSCOCT00037854001;Name=Cc01_g01740;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,CC_EC_number:missing_EC_number,PRODUCT:Disease resistance-like protein (Fragment),CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037854001~ Disease resistance-like protein (Fragment)~ unknown_gene~ fragment;original_location=complement(203053..203247);owner=coffea | |
| 2044 chr1 manual_curation exon 2977459 2977653 . + . Parent=GSCOCT00037854001 | |
| 2045 chr1 manual_curation CDS 2977459 2977653 . + 0 Parent=GSCOCT00037854001 | |
| 2046 chr1 manual_curation gene 2986324 2989806 . + . ID=GSCOCG00037853001;Name=Cc01_g01750 | |
| 2047 chr1 manual_curation mRNA 2986324 2989806 . + . ID=GSCOCT00037853001;Parent=GSCOCG00037853001;Name=Cc01_g01750 | |
| 2048 chr1 manual_curation polypeptide 2986324 2989806 . + . ID=GSCOCP00037853001;Dbxref=InterPro:IPR000767,InterPro:IPR001611,InterPro:IPR002182,PFAM:PF00560,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q7XA39,SwissProt:Q7XA40,SwissProt:Q7XBQ9,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TAIR:AT3G46530.1,TrEMBL:B9IBB8,TrEMBL:B9NBB7,TrEMBL:B9S468;Derives_from=GSCOCT00037853001;Name=Cc01_g01750;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance protein RGA3,CC_functional_completeness:complete,CC_gene:RGA3,CC_gene:RGA2,CC_gene:RGA4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037853001~ Putative disease resistance protein RGA3~ RGA3~ complete;original_location=complement(join(193952..194382%2C191929..193897%2C191399..191838%2C190900..191317));owner=coffea | |
| 2049 chr1 manual_curation exon 2989389 2989806 . + . Parent=GSCOCT00037853001 | |
| 2050 chr1 manual_curation exon 2988868 2989307 . + . Parent=GSCOCT00037853001 | |
| 2051 chr1 manual_curation exon 2986809 2988777 . + . Parent=GSCOCT00037853001 | |
| 2052 chr1 manual_curation exon 2986324 2986754 . + . Parent=GSCOCT00037853001 | |
| 2053 chr1 manual_curation CDS 2989389 2989806 . + 2 Parent=GSCOCT00037853001 | |
| 2054 chr1 manual_curation CDS 2988868 2989307 . + 0 Parent=GSCOCT00037853001 | |
| 2055 chr1 manual_curation CDS 2986809 2988777 . + 2 Parent=GSCOCT00037853001 | |
| 2056 chr1 manual_curation CDS 2986324 2986754 . + 0 Parent=GSCOCT00037853001 | |
| 2057 chr1 manual_curation gene 2996360 2997294 . + . ID=GSCOCG00037852001;Name=Cc01_g01760 | |
| 2058 chr1 manual_curation mRNA 2996360 2997294 . + . ID=GSCOCT00037852001;Parent=GSCOCG00037852001;Name=Cc01_g01760 | |
| 2059 chr1 manual_curation polypeptide 2996360 2997294 . + . ID=GSCOCP00037852001;Derives_from=GSCOCT00037852001;Name=Cc01_g01760;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037852001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(184230..184346%2C183412..183627));owner=coffea | |
| 2060 chr1 manual_curation exon 2997079 2997294 . + . Parent=GSCOCT00037852001 | |
| 2061 chr1 manual_curation exon 2996360 2996476 . + . Parent=GSCOCT00037852001 | |
| 2062 chr1 manual_curation CDS 2997079 2997294 . + 0 Parent=GSCOCT00037852001 | |
| 2063 chr1 manual_curation CDS 2996360 2996476 . + 0 Parent=GSCOCT00037852001 | |
| 2064 chr1 manual_curation gene 3052489 3076874 . + . ID=GSCOCG00037850001;Name=Cc01_g01770 | |
| 2065 chr1 manual_curation mRNA 3052489 3076874 . + . ID=GSCOCT00037850001;Parent=GSCOCG00037850001;Name=Cc01_g01770 | |
| 2066 chr1 manual_curation polypeptide 3052489 3076627 . + . ID=GSCOCP00037850001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q7XA39,SwissProt:Q7XA40,SwissProt:Q9LRR4,TAIR:AT1G50180.1,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TrEMBL:B9NDT4,TrEMBL:B9NED8,TrEMBL:B9S468;Derives_from=GSCOCT00037850001;Name=Cc01_g01770;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance RPP13-like protein 1,CC_functional_completeness:fragment,CC_gene:RPPL1,CC_gene:RGA4,CC_gene:RGA3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037850001~ Putative disease resistance RPP13-like protein 1~ RPPL1~ fragment;original_location=complement(join(127384..128217%2C126541..127309%2C125883..126489%2C125528..125777%2C125447..125461%2C104442..104535%2C104079..104086));owner=coffea | |
| 2067 chr1 manual_curation exon 3076620 3076874 . + . Parent=GSCOCT00037850001 | |
| 2068 chr1 manual_curation exon 3076171 3076264 . + . Parent=GSCOCT00037850001 | |
| 2069 chr1 manual_curation exon 3055245 3055259 . + . Parent=GSCOCT00037850001 | |
| 2070 chr1 manual_curation exon 3054929 3055178 . + . Parent=GSCOCT00037850001 | |
| 2071 chr1 manual_curation exon 3054217 3054823 . + . Parent=GSCOCT00037850001 | |
| 2072 chr1 manual_curation exon 3053397 3054165 . + . Parent=GSCOCT00037850001 | |
| 2073 chr1 manual_curation exon 3052489 3053322 . + . Parent=GSCOCT00037850001 | |
| 2074 chr1 manual_curation CDS 3076620 3076627 . + 1 Parent=GSCOCT00037850001 | |
| 2075 chr1 manual_curation CDS 3076171 3076264 . + 0 Parent=GSCOCT00037850001 | |
| 2076 chr1 manual_curation CDS 3055245 3055259 . + 0 Parent=GSCOCT00037850001 | |
| 2077 chr1 manual_curation CDS 3054929 3055178 . + 2 Parent=GSCOCT00037850001 | |
| 2078 chr1 manual_curation CDS 3054217 3054823 . + 1 Parent=GSCOCT00037850001 | |
| 2079 chr1 manual_curation CDS 3053397 3054165 . + 0 Parent=GSCOCT00037850001 | |
| 2080 chr1 manual_curation CDS 3052489 3053322 . + 0 Parent=GSCOCT00037850001 | |
| 2081 chr1 manual_curation gene 3080550 3082059 . + . ID=GSCOCG00037849001;Name=Cc01_g01780 | |
| 2082 chr1 manual_curation mRNA 3080550 3082059 . + . ID=GSCOCT00037849001;Parent=GSCOCG00037849001;Name=Cc01_g01780 | |
| 2083 chr1 manual_curation polypeptide 3080550 3081918 . + . ID=GSCOCP00037849001;Derives_from=GSCOCT00037849001;Name=Cc01_g01780;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037849001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(100064..100156%2C99875..99979%2C99690..99788%2C98788..99018));owner=coffea | |
| 2084 chr1 manual_curation exon 3081688 3082059 . + . Parent=GSCOCT00037849001 | |
| 2085 chr1 manual_curation exon 3080918 3081016 . + . Parent=GSCOCT00037849001 | |
| 2086 chr1 manual_curation exon 3080727 3080831 . + . Parent=GSCOCT00037849001 | |
| 2087 chr1 manual_curation exon 3080550 3080642 . + . Parent=GSCOCT00037849001 | |
| 2088 chr1 manual_curation CDS 3081688 3081918 . + 0 Parent=GSCOCT00037849001 | |
| 2089 chr1 manual_curation CDS 3080918 3081016 . + 0 Parent=GSCOCT00037849001 | |
| 2090 chr1 manual_curation CDS 3080727 3080831 . + 0 Parent=GSCOCT00037849001 | |
| 2091 chr1 manual_curation CDS 3080550 3080642 . + 0 Parent=GSCOCT00037849001 | |
| 2092 chr1 manual_curation gene 3097512 3100742 . - . ID=GSCOCG00037847001;Name=Cc01_g01790 | |
| 2093 chr1 manual_curation mRNA 3097512 3100742 . - . ID=GSCOCT00037847001;Parent=GSCOCG00037847001;Name=Cc01_g01790 | |
| 2094 chr1 manual_curation polypeptide 3097512 3100584 . - . ID=GSCOCP00037847001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q7XA39,SwissProt:Q7XA40,SwissProt:Q7XBQ9,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TAIR:AT3G50950.2,TrEMBL:B9IBB8,TrEMBL:B9MYT6,TrEMBL:B9NBC0;Derives_from=GSCOCT00037847001;Name=Cc01_g01790;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative Disease resistance protein RGA2,CC_functional_completeness:complete,CC_gene:RGA2,CC_gene:RGA3,CC_gene:RGA4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037847001~ Putative Disease resistance protein RGA2~ RGA2~ complete;original_location=join(80122..80162%2C80240..81088%2C81315..82315%2C82367..83017%2C83172..83194);owner=coffea | |
| 2095 chr1 manual_curation exon 3100544 3100742 . - . Parent=GSCOCT00037847001 | |
| 2096 chr1 manual_curation exon 3099618 3100466 . - . Parent=GSCOCT00037847001 | |
| 2097 chr1 manual_curation exon 3098391 3099391 . - . Parent=GSCOCT00037847001 | |
| 2098 chr1 manual_curation exon 3097689 3098339 . - . Parent=GSCOCT00037847001 | |
| 2099 chr1 manual_curation exon 3097512 3097534 . - . Parent=GSCOCT00037847001 | |
| 2100 chr1 manual_curation CDS 3100544 3100584 . - 0 Parent=GSCOCT00037847001 | |
| 2101 chr1 manual_curation CDS 3099618 3100466 . - 2 Parent=GSCOCT00037847001 | |
| 2102 chr1 manual_curation CDS 3098391 3099391 . - 2 Parent=GSCOCT00037847001 | |
| 2103 chr1 manual_curation CDS 3097689 3098339 . - 1 Parent=GSCOCT00037847001 | |
| 2104 chr1 manual_curation CDS 3097512 3097534 . - 1 Parent=GSCOCT00037847001 | |
| 2105 chr1 manual_curation gene 3125375 3130402 . - . ID=GSCOCG00037845001;Name=Cc01_g01800 | |
| 2106 chr1 manual_curation mRNA 3125375 3130402 . - . ID=GSCOCT00037845001;Parent=GSCOCG00037845001;Name=Cc01_g01800 | |
| 2107 chr1 manual_curation polypeptide 3125781 3130402 . - . ID=GSCOCP00037845001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q7XA39,SwissProt:Q7XA40,SwissProt:Q7XBQ9,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TAIR:AT3G46530.1,TrEMBL:B9NBB7,TrEMBL:B9NBC0,TrEMBL:B9NED8;Derives_from=GSCOCT00037845001;Name=Cc01_g01800;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance protein RGA4,CC_functional_completeness:complete,CC_gene:RGA4,CC_gene:RGA2,CC_gene:RGA3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037845001~ Putative disease resistance protein RGA4~ RGA4~ complete;original_location=join(50304..50578%2C50633..50837%2C51559..52476%2C52567..53500%2C53594..53808%2C53869..54633%2C54881..54925);owner=coffea | |
| 2108 chr1 manual_curation exon 3130128 3130402 . - . Parent=GSCOCT00037845001 | |
| 2109 chr1 manual_curation exon 3129869 3130073 . - . Parent=GSCOCT00037845001 | |
| 2110 chr1 manual_curation exon 3128230 3129147 . - . Parent=GSCOCT00037845001 | |
| 2111 chr1 manual_curation exon 3127206 3128139 . - . Parent=GSCOCT00037845001 | |
| 2112 chr1 manual_curation exon 3126898 3127112 . - . Parent=GSCOCT00037845001 | |
| 2113 chr1 manual_curation exon 3126073 3126837 . - . Parent=GSCOCT00037845001 | |
| 2114 chr1 manual_curation exon 3125375 3125825 . - . Parent=GSCOCT00037845001 | |
| 2115 chr1 manual_curation CDS 3130128 3130402 . - 0 Parent=GSCOCT00037845001 | |
| 2116 chr1 manual_curation CDS 3129869 3130073 . - 2 Parent=GSCOCT00037845001 | |
| 2117 chr1 manual_curation CDS 3128230 3129147 . - 0 Parent=GSCOCT00037845001 | |
| 2118 chr1 manual_curation CDS 3127206 3128139 . - 0 Parent=GSCOCT00037845001 | |
| 2119 chr1 manual_curation CDS 3126898 3127112 . - 1 Parent=GSCOCT00037845001 | |
| 2120 chr1 manual_curation CDS 3126073 3126837 . - 0 Parent=GSCOCT00037845001 | |
| 2121 chr1 manual_curation CDS 3125781 3125825 . - 0 Parent=GSCOCT00037845001 | |
| 2122 chr1 manual_curation gene 3148072 3148338 . - . ID=GSCOCG00037843001;Name=Cc01_g01810 | |
| 2123 chr1 manual_curation mRNA 3148072 3148338 . - . ID=GSCOCT00037843001;Parent=GSCOCG00037843001;Name=Cc01_g01810 | |
| 2124 chr1 manual_curation polypeptide 3148072 3148338 . - . ID=GSCOCP00037843001;Derives_from=GSCOCT00037843001;Name=Cc01_g01810;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00037843001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(32368..32561%2C32595..32634);owner=coffea | |
| 2125 chr1 manual_curation exon 3148145 3148338 . - . Parent=GSCOCT00037843001 | |
| 2126 chr1 manual_curation exon 3148072 3148111 . - . Parent=GSCOCT00037843001 | |
| 2127 chr1 manual_curation CDS 3148145 3148338 . - 0 Parent=GSCOCT00037843001 | |
| 2128 chr1 manual_curation CDS 3148072 3148111 . - 2 Parent=GSCOCT00037843001 | |
| 2129 chr1 manual_curation gene 3191085 3194101 . + . ID=GSCOCG00019250001;Name=Cc01_g01820 | |
| 2130 chr1 manual_curation mRNA 3191085 3194101 . + . ID=GSCOCT00019250001;Parent=GSCOCG00019250001;Name=Cc01_g01820 | |
| 2131 chr1 manual_curation polypeptide 3191085 3194101 . + . ID=GSCOCP00019250001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q7XA39,SwissProt:Q7XA40,SwissProt:Q7XBQ9,TAIR:AT3G07040.1,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TrEMBL:B9NED8,TrEMBL:F6HHX4,TrEMBL:Q19PN6;Derives_from=GSCOCT00019250001;Name=Cc01_g01820;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance protein RGA4,CC_functional_completeness:complete,CC_gene:RGA4,CC_gene:RGA2,CC_gene:RGA3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019250001~ Putative disease resistance protein RGA4~ RGA4~ complete;original_location=join(10280..10582%2C10646..11759%2C11885..13296);owner=coffea | |
| 2132 chr1 manual_curation exon 3191085 3191387 . + . Parent=GSCOCT00019250001 | |
| 2133 chr1 manual_curation exon 3191451 3192564 . + . Parent=GSCOCT00019250001 | |
| 2134 chr1 manual_curation exon 3192690 3194101 . + . Parent=GSCOCT00019250001 | |
| 2135 chr1 manual_curation CDS 3191085 3191387 . + 0 Parent=GSCOCT00019250001 | |
| 2136 chr1 manual_curation CDS 3191451 3192564 . + 0 Parent=GSCOCT00019250001 | |
| 2137 chr1 manual_curation CDS 3192690 3194101 . + 1 Parent=GSCOCT00019250001 | |
| 2138 chr1 manual_curation gene 3196635 3197561 . + . ID=GSCOCG00019251001;Name=Cc01_g01830 | |
| 2139 chr1 manual_curation mRNA 3196635 3197561 . + . ID=GSCOCT00019251001;Parent=GSCOCG00019251001;Name=Cc01_g01830 | |
| 2140 chr1 manual_curation polypeptide 3197147 3197561 . + . ID=GSCOCP00019251001;Derives_from=GSCOCT00019251001;Name=Cc01_g01830;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019251001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(16342..16399%2C16518..16756);owner=coffea | |
| 2141 chr1 manual_curation exon 3196635 3197204 . + . Parent=GSCOCT00019251001 | |
| 2142 chr1 manual_curation exon 3197323 3197561 . + . Parent=GSCOCT00019251001 | |
| 2143 chr1 manual_curation CDS 3197147 3197204 . + 0 Parent=GSCOCT00019251001 | |
| 2144 chr1 manual_curation CDS 3197323 3197561 . + 1 Parent=GSCOCT00019251001 | |
| 2145 chr1 manual_curation gene 3293474 3296240 . + . ID=GSCOCG00019254001;Name=Cc01_g01840 | |
| 2146 chr1 manual_curation mRNA 3293474 3296240 . + . ID=GSCOCT00019254001;Parent=GSCOCG00019254001;Name=Cc01_g01840 | |
| 2147 chr1 manual_curation polypeptide 3293474 3296240 . + . ID=GSCOCP00019254001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q7XA39,SwissProt:Q7XA40,SwissProt:Q7XA42,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TAIR:AT3G50950.2,TrEMBL:A5BZM5,TrEMBL:G7J119,TrEMBL:Q6TAF7;Derives_from=GSCOCT00019254001;Name=Cc01_g01840;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance protein RGA4,CC_functional_completeness:fragment,CC_gene:RGA4,CC_gene:RGA1,CC_gene:RGA3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019254001~ Putative disease resistance protein RGA4~ RGA4~ fragment;original_location=join(112669..112941%2C113035..113370%2C113428..113866%2C114086..115141%2C115350..115435);owner=coffea | |
| 2148 chr1 manual_curation exon 3293474 3293746 . + . Parent=GSCOCT00019254001 | |
| 2149 chr1 manual_curation exon 3293840 3294175 . + . Parent=GSCOCT00019254001 | |
| 2150 chr1 manual_curation exon 3294233 3294671 . + . Parent=GSCOCT00019254001 | |
| 2151 chr1 manual_curation exon 3294891 3295946 . + . Parent=GSCOCT00019254001 | |
| 2152 chr1 manual_curation exon 3296155 3296240 . + . Parent=GSCOCT00019254001 | |
| 2153 chr1 manual_curation CDS 3293474 3293746 . + 0 Parent=GSCOCT00019254001 | |
| 2154 chr1 manual_curation CDS 3293840 3294175 . + 0 Parent=GSCOCT00019254001 | |
| 2155 chr1 manual_curation CDS 3294233 3294671 . + 0 Parent=GSCOCT00019254001 | |
| 2156 chr1 manual_curation CDS 3294891 3295946 . + 1 Parent=GSCOCT00019254001 | |
| 2157 chr1 manual_curation CDS 3296155 3296240 . + 1 Parent=GSCOCT00019254001 | |
| 2158 chr1 manual_curation gene 3322875 3330293 . - . ID=GSCOCG00019257001;Name=Cc01_g01850 | |
| 2159 chr1 manual_curation mRNA 3322875 3330293 . - . ID=GSCOCT00019257001;Parent=GSCOCG00019257001;Name=Cc01_g01850 | |
| 2160 chr1 manual_curation polypeptide 3323119 3326880 . - . ID=GSCOCP00019257001;Dbxref=GENE3D:G3DSA:2.60.210.10,GENE3D:G3DSA:3.90.890.10,InterPro:IPR001841,InterPro:IPR004162,InterPro:IPR008974,InterPro:IPR013010,InterPro:IPR013322,InterPro:IPR013323,InterPro:IPR018121,PANTHER:PTHR10315,PFAM:PF03145,PROFILE:PS50089,PROFILE:PS51081,SUPERFAMILY:SSF49599,SwissProt:P93748,SwissProt:Q84JL3,SwissProt:Q9M2P4,TAIR:AT2G41980.1,TAIR:AT3G58040.1,TAIR:AT3G61790.1,TrEMBL:A5AGG4,TrEMBL:D7SLE4,TrEMBL:Q9XGC3;Derives_from=GSCOCT00019257001;Name=Cc01_g01850;Ontology_term=CC_evidence_code:ISS,GO:0004842,GO:0005515,GO:0005634,GO:0006511,GO:0007275,GO:0008270,GO:0016567,CC_EC_number:missing_EC_number,PRODUCT:E3 ubiquitin-protein ligase SINAT2,CC_functional_completeness:complete,CC_gene:SINAT2,CC_gene:SINAT1,CC_gene:SINAT3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019257001~ E3 ubiquitin-protein ligase SINAT2~ SINAT2~ complete;original_location=complement(join(145857..146075%2C145055..145438%2C142314..142637));owner=coffea | |
| 2161 chr1 manual_curation exon 3328957 3329011 . - . Parent=GSCOCT00019257001 | |
| 2162 chr1 manual_curation exon 3330076 3330293 . - . Parent=GSCOCT00019257001 | |
| 2163 chr1 manual_curation exon 3322875 3323442 . - . Parent=GSCOCT00019257001 | |
| 2164 chr1 manual_curation exon 3325860 3326243 . - . Parent=GSCOCT00019257001 | |
| 2165 chr1 manual_curation exon 3326662 3326980 . - . Parent=GSCOCT00019257001 | |
| 2166 chr1 manual_curation CDS 3323119 3323442 . - 0 Parent=GSCOCT00019257001 | |
| 2167 chr1 manual_curation CDS 3325860 3326243 . - 0 Parent=GSCOCT00019257001 | |
| 2168 chr1 manual_curation CDS 3326662 3326880 . - 0 Parent=GSCOCT00019257001 | |
| 2169 chr1 manual_curation gene 3331924 3337474 . - . ID=GSCOCG00019258001;Name=Cc01_g01860 | |
| 2170 chr1 manual_curation mRNA 3331924 3337474 . - . ID=GSCOCT00019258001;Parent=GSCOCG00019258001;Name=Cc01_g01860 | |
| 2171 chr1 manual_curation polypeptide 3332195 3337232 . - . ID=GSCOCP00019258001;Dbxref=InterPro:IPR011513,InterPro:IPR014857,PFAM:PF07574,PFAM:PF08746,SwissProt:Q499U6,SwissProt:Q5RAZ5,SwissProt:Q9D720,TAIR:AT5G21140.1,TrEMBL:B4FXP9,TrEMBL:B9S6N4,TrEMBL:D7T1H8;Derives_from=GSCOCT00019258001;Name=Cc01_g01860;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Non-structural maintenance of chromosomes element 1 homolog,CC_functional_completeness:modules,CC_gene:Nsmce1,CC_gene:NSMCE1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019258001~ Putative Non-structural maintenance of chromosomes element 1 homolog~ Nsmce1~ modules;original_location=complement(join(156304..156427%2C155377..155567%2C154419..154499%2C152409..152648%2C151749..151826%2C151390..151650));owner=coffea | |
| 2172 chr1 manual_curation exon 3331924 3332455 . - . Parent=GSCOCT00019258001 | |
| 2173 chr1 manual_curation exon 3332554 3332631 . - . Parent=GSCOCT00019258001 | |
| 2174 chr1 manual_curation exon 3333214 3333453 . - . Parent=GSCOCT00019258001 | |
| 2175 chr1 manual_curation exon 3335224 3335304 . - . Parent=GSCOCT00019258001 | |
| 2176 chr1 manual_curation exon 3336182 3336372 . - . Parent=GSCOCT00019258001 | |
| 2177 chr1 manual_curation exon 3337109 3337474 . - . Parent=GSCOCT00019258001 | |
| 2178 chr1 manual_curation CDS 3332195 3332455 . - 0 Parent=GSCOCT00019258001 | |
| 2179 chr1 manual_curation CDS 3332554 3332631 . - 0 Parent=GSCOCT00019258001 | |
| 2180 chr1 manual_curation CDS 3333214 3333453 . - 0 Parent=GSCOCT00019258001 | |
| 2181 chr1 manual_curation CDS 3335224 3335304 . - 0 Parent=GSCOCT00019258001 | |
| 2182 chr1 manual_curation CDS 3336182 3336372 . - 1 Parent=GSCOCT00019258001 | |
| 2183 chr1 manual_curation CDS 3337109 3337232 . - 0 Parent=GSCOCT00019258001 | |
| 2184 chr1 manual_curation gene 3338415 3350284 . + . ID=GSCOCG00019259001;Name=Cc01_g01870 | |
| 2185 chr1 manual_curation mRNA 3338415 3350284 . + . ID=GSCOCT00019259001;Parent=GSCOCG00019259001;Name=Cc01_g01870 | |
| 2186 chr1 manual_curation polypeptide 3338415 3350058 . + . ID=GSCOCP00019259001;Dbxref=InterPro:IPR000555,InterPro:IPR012591,InterPro:IPR012592,InterPro:IPR012984,InterPro:IPR019580,InterPro:IPR019581,InterPro:IPR019582,InterPro:IPR021983,PFAM:PF01398,PFAM:PF08082,PFAM:PF08083,PFAM:PF08084,PFAM:PF10596,PFAM:PF10597,PFAM:PF10598,PFAM:PF12134,PRODOM:PD149576,SMART:SM00232,SwissProt:P34369,SwissProt:Q6P2Q9,SwissProt:Q99PV0,TAIR:AT1G80070.1,TAIR:AT4G38780.1,TrEMBL:B9MWN9,TrEMBL:B9RV85,TrEMBL:D7U143;Derives_from=GSCOCT00019259001;Name=Cc01_g01870;Ontology_term=CC_evidence_code:ISS,GO:0005681,CC_EC_number:missing_EC_number,PRODUCT:Pre-mRNA-processing-splicing factor 8,CC_functional_completeness:complete,CC_gene:Prpf8,CC_gene:PRPF8,CC_gene:prp-8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019259001~ Pre-mRNA-processing-splicing factor 8~ Prpf8~ complete;original_location=join(157610..157941%2C159756..159879%2C160000..160092%2C160290..160680%2C160860..161346%2C161442..161617%2C161674..163626%2C163716..164084%2C164191..164314%2C164407..164596%2C164684..164791%2C165091..165344%2C165794..166410%2C166497..166603%2C166713..166967%2C167044..167517%2C167734..167895%2C167992..168189%2C168267..168545%2C168708..168950%2C169062..169253);owner=coffea | |
| 2187 chr1 manual_curation exon 3338415 3338746 . + . Parent=GSCOCT00019259001 | |
| 2188 chr1 manual_curation exon 3340561 3340684 . + . Parent=GSCOCT00019259001 | |
| 2189 chr1 manual_curation exon 3340805 3340897 . + . Parent=GSCOCT00019259001 | |
| 2190 chr1 manual_curation exon 3341095 3341485 . + . Parent=GSCOCT00019259001 | |
| 2191 chr1 manual_curation exon 3341665 3342151 . + . Parent=GSCOCT00019259001 | |
| 2192 chr1 manual_curation exon 3342247 3342422 . + . Parent=GSCOCT00019259001 | |
| 2193 chr1 manual_curation exon 3342479 3344431 . + . Parent=GSCOCT00019259001 | |
| 2194 chr1 manual_curation exon 3344521 3344889 . + . Parent=GSCOCT00019259001 | |
| 2195 chr1 manual_curation exon 3344996 3345119 . + . Parent=GSCOCT00019259001 | |
| 2196 chr1 manual_curation exon 3345212 3345401 . + . Parent=GSCOCT00019259001 | |
| 2197 chr1 manual_curation exon 3345489 3345596 . + . Parent=GSCOCT00019259001 | |
| 2198 chr1 manual_curation exon 3345896 3346149 . + . Parent=GSCOCT00019259001 | |
| 2199 chr1 manual_curation exon 3346599 3347215 . + . Parent=GSCOCT00019259001 | |
| 2200 chr1 manual_curation exon 3347302 3347408 . + . Parent=GSCOCT00019259001 | |
| 2201 chr1 manual_curation exon 3347518 3347772 . + . Parent=GSCOCT00019259001 | |
| 2202 chr1 manual_curation exon 3347849 3348322 . + . Parent=GSCOCT00019259001 | |
| 2203 chr1 manual_curation exon 3348539 3348700 . + . Parent=GSCOCT00019259001 | |
| 2204 chr1 manual_curation exon 3348797 3348994 . + . Parent=GSCOCT00019259001 | |
| 2205 chr1 manual_curation exon 3349072 3349350 . + . Parent=GSCOCT00019259001 | |
| 2206 chr1 manual_curation exon 3349513 3349755 . + . Parent=GSCOCT00019259001 | |
| 2207 chr1 manual_curation exon 3349867 3350284 . + . Parent=GSCOCT00019259001 | |
| 2208 chr1 manual_curation CDS 3338415 3338746 . + 0 Parent=GSCOCT00019259001 | |
| 2209 chr1 manual_curation CDS 3340561 3340684 . + 2 Parent=GSCOCT00019259001 | |
| 2210 chr1 manual_curation CDS 3340805 3340897 . + 0 Parent=GSCOCT00019259001 | |
| 2211 chr1 manual_curation CDS 3341095 3341485 . + 0 Parent=GSCOCT00019259001 | |
| 2212 chr1 manual_curation CDS 3341665 3342151 . + 1 Parent=GSCOCT00019259001 | |
| 2213 chr1 manual_curation CDS 3342247 3342422 . + 2 Parent=GSCOCT00019259001 | |
| 2214 chr1 manual_curation CDS 3342479 3344431 . + 1 Parent=GSCOCT00019259001 | |
| 2215 chr1 manual_curation CDS 3344521 3344889 . + 1 Parent=GSCOCT00019259001 | |
| 2216 chr1 manual_curation CDS 3344996 3345119 . + 1 Parent=GSCOCT00019259001 | |
| 2217 chr1 manual_curation CDS 3345212 3345401 . + 2 Parent=GSCOCT00019259001 | |
| 2218 chr1 manual_curation CDS 3345489 3345596 . + 0 Parent=GSCOCT00019259001 | |
| 2219 chr1 manual_curation CDS 3345896 3346149 . + 0 Parent=GSCOCT00019259001 | |
| 2220 chr1 manual_curation CDS 3346599 3347215 . + 2 Parent=GSCOCT00019259001 | |
| 2221 chr1 manual_curation CDS 3347302 3347408 . + 1 Parent=GSCOCT00019259001 | |
| 2222 chr1 manual_curation CDS 3347518 3347772 . + 0 Parent=GSCOCT00019259001 | |
| 2223 chr1 manual_curation CDS 3347849 3348322 . + 0 Parent=GSCOCT00019259001 | |
| 2224 chr1 manual_curation CDS 3348539 3348700 . + 0 Parent=GSCOCT00019259001 | |
| 2225 chr1 manual_curation CDS 3348797 3348994 . + 0 Parent=GSCOCT00019259001 | |
| 2226 chr1 manual_curation CDS 3349072 3349350 . + 0 Parent=GSCOCT00019259001 | |
| 2227 chr1 manual_curation CDS 3349513 3349755 . + 0 Parent=GSCOCT00019259001 | |
| 2228 chr1 manual_curation CDS 3349867 3350058 . + 0 Parent=GSCOCT00019259001 | |
| 2229 chr1 manual_curation gene 3356726 3358876 . - . ID=GSCOCG00019260001;Name=Cc01_g01880 | |
| 2230 chr1 manual_curation mRNA 3356726 3358876 . - . ID=GSCOCT00019260001;Parent=GSCOCG00019260001;Name=Cc01_g01880 | |
| 2231 chr1 manual_curation polypeptide 3356726 3358876 . - . ID=GSCOCP00019260001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,SUPERFAMILY:SSF48264,SwissProt:O49396,SwissProt:Q43068,SwissProt:Q9SZ46,TAIR:AT4G31940.1,TAIR:AT4G31950.1,TAIR:AT4G31970.1,TrEMBL:A5BQG5,TrEMBL:B9MVI3,TrEMBL:B9N4T1;Derives_from=GSCOCT00019260001;Name=Cc01_g01880;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.21,PRODUCT:Cytochrome P450 82C4,CC_functional_completeness:fragment,CC_gene:CYP82C4,CC_gene:CYP82C3,CC_gene:CYP82A1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019260001~ Cytochrome P450 82C4~ CYP82C4~ fragment;original_location=complement(join(178030..178071%2C177661..177917%2C175921..175978));owner=coffea | |
| 2232 chr1 manual_curation exon 3356726 3356783 . - . Parent=GSCOCT00019260001 | |
| 2233 chr1 manual_curation exon 3358466 3358722 . - . Parent=GSCOCT00019260001 | |
| 2234 chr1 manual_curation exon 3358835 3358876 . - . Parent=GSCOCT00019260001 | |
| 2235 chr1 manual_curation CDS 3356726 3356783 . - 2 Parent=GSCOCT00019260001 | |
| 2236 chr1 manual_curation CDS 3358466 3358722 . - 0 Parent=GSCOCT00019260001 | |
| 2237 chr1 manual_curation CDS 3358835 3358876 . - 0 Parent=GSCOCT00019260001 | |
| 2238 chr1 manual_curation gene 3359327 3359464 . + . ID=GSCOCG00019261001;Name=Cc01_g01890 | |
| 2239 chr1 manual_curation mRNA 3359327 3359464 . + . ID=GSCOCT00019261001;Parent=GSCOCG00019261001;Name=Cc01_g01890 | |
| 2240 chr1 manual_curation polypeptide 3359360 3359464 . + . ID=GSCOCP00019261001;Derives_from=GSCOCT00019261001;Name=Cc01_g01890;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019261001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=178555..178659;owner=coffea | |
| 2241 chr1 manual_curation exon 3359327 3359464 . + . Parent=GSCOCT00019261001 | |
| 2242 chr1 manual_curation CDS 3359360 3359464 . + 0 Parent=GSCOCT00019261001 | |
| 2243 chr1 manual_curation gene 3362178 3362515 . - . ID=GSCOCG00019262001;Name=Cc01_g01900 | |
| 2244 chr1 manual_curation mRNA 3362178 3362515 . - . ID=GSCOCT00019262001;Parent=GSCOCG00019262001;Name=Cc01_g01900 | |
| 2245 chr1 manual_curation polypeptide 3362242 3362515 . - . ID=GSCOCP00019262001;Derives_from=GSCOCT00019262001;Name=Cc01_g01900;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019262001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(181557..181710%2C181437..181462));owner=coffea | |
| 2246 chr1 manual_curation exon 3362178 3362267 . - . Parent=GSCOCT00019262001 | |
| 2247 chr1 manual_curation exon 3362362 3362515 . - . Parent=GSCOCT00019262001 | |
| 2248 chr1 manual_curation CDS 3362242 3362267 . - 1 Parent=GSCOCT00019262001 | |
| 2249 chr1 manual_curation CDS 3362362 3362515 . - 0 Parent=GSCOCT00019262001 | |
| 2250 chr1 manual_curation gene 3382518 3383541 . - . ID=GSCOCG00019263001;Name=Cc01_g01910 | |
| 2251 chr1 manual_curation mRNA 3382518 3383541 . - . ID=GSCOCT00019263001;Parent=GSCOCG00019263001;Name=Cc01_g01910 | |
| 2252 chr1 manual_curation polypeptide 3382693 3383478 . - . ID=GSCOCP00019263001;Dbxref=GENE3D:G3DSA:3.90.730.10,InterPro:IPR001568,InterPro:IPR018188,PANTHER:PTHR11240,PFAM:PF00445,PROSITE:PS00530,PROSITE:PS00531,SUPERFAMILY:SSF55895,SwissProt:P04007,SwissProt:Q40379,SwissProt:Q40381,TAIR:AT1G14220.1,TAIR:AT1G26820.1,TAIR:AT2G02990.1,TrEMBL:H1ZS19,TrEMBL:H1ZS20,TrEMBL:H1ZS21;Derives_from=GSCOCT00019263001;Name=Cc01_g01910;Ontology_term=CC_evidence_code:ISS,GO:0003723,GO:0033897,CC_EC_number:3.1.27.1,PRODUCT:Putative Ribonuclease S-2,CC_functional_completeness:complete,CC_gene:S-2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019263001~ Putative Ribonuclease S-2~ S-2~ complete;original_location=complement(join(202428..202673%2C201888..202340));owner=coffea | |
| 2253 chr1 manual_curation exon 3382518 3383145 . - . Parent=GSCOCT00019263001 | |
| 2254 chr1 manual_curation exon 3383233 3383541 . - . Parent=GSCOCT00019263001 | |
| 2255 chr1 manual_curation CDS 3382693 3383145 . - 0 Parent=GSCOCT00019263001 | |
| 2256 chr1 manual_curation CDS 3383233 3383478 . - 0 Parent=GSCOCT00019263001 | |
| 2257 chr1 manual_curation gene 3502924 3503400 . - . ID=GSCOCG00019271001;Name=Cc01_g01920 | |
| 2258 chr1 manual_curation mRNA 3502924 3503400 . - . ID=GSCOCT00019271001;Parent=GSCOCG00019271001;Name=Cc01_g01920 | |
| 2259 chr1 manual_curation polypeptide 3502924 3503400 . - . ID=GSCOCP00019271001;Dbxref=GENE3D:G3DSA:3.30.710.10,InterPro:IPR001232,InterPro:IPR011333,InterPro:IPR016072,InterPro:IPR016073,InterPro:IPR016897,PANTHER:PTHR11165,PFAM:PF01466,PFAM:PF03931,PIR:PIRSF028729,SMART:SM00512,SUPERFAMILY:SSF54695,SUPERFAMILY:SSF81382,SwissProt:Q39255,SwissProt:Q9LNT9,SwissProt:Q9SL93,TAIR:AT1G20140.1,TAIR:AT1G75950.1,TAIR:AT2G25700.1,TrEMBL:A0ELU5,TrEMBL:B6CNU9,TrEMBL:D3TVT1;Derives_from=GSCOCT00019271001;Name=Cc01_g01920;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0006511,CC_EC_number:missing_EC_number,PRODUCT:SKP1-like protein 4,CC_functional_completeness:complete,CC_gene:ASK4,CC_gene:ASK3,CC_gene:SKP1A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019271001~ SKP1-like protein 4~ ASK4~ complete;original_location=complement(322119..322595);owner=coffea | |
| 2260 chr1 manual_curation exon 3502924 3503400 . - . Parent=GSCOCT00019271001 | |
| 2261 chr1 manual_curation CDS 3502924 3503400 . - 0 Parent=GSCOCT00019271001 | |
| 2262 chr1 manual_curation gene 3509136 3509594 . + . ID=GSCOCG00019272001;Name=Cc01_g01930 | |
| 2263 chr1 manual_curation mRNA 3509136 3509594 . + . ID=GSCOCT00019272001;Parent=GSCOCG00019272001;Name=Cc01_g01930 | |
| 2264 chr1 manual_curation polypeptide 3509136 3509594 . + . ID=GSCOCP00019272001;Dbxref=GENE3D:G3DSA:3.30.710.10,InterPro:IPR001232,InterPro:IPR011333,InterPro:IPR016072,InterPro:IPR016073,InterPro:IPR016897,PANTHER:PTHR11165,PFAM:PF01466,PFAM:PF03931,PIR:PIRSF028729,SMART:SM00512,SUPERFAMILY:SSF54695,SUPERFAMILY:SSF81382,SwissProt:Q39255,SwissProt:Q9LNT9,SwissProt:Q9SL93,TAIR:AT1G20140.1,TAIR:AT1G75950.1,TAIR:AT2G25700.1,TrEMBL:A5C7K8,TrEMBL:B6CNU7,TrEMBL:C3V9V9;Derives_from=GSCOCT00019272001;Name=Cc01_g01930;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0006511,CC_EC_number:missing_EC_number,PRODUCT:SKP1-like protein 4,CC_functional_completeness:complete,CC_gene:ASK4,CC_gene:ASK3,CC_gene:SKP1A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019272001~ SKP1-like protein 4~ ASK4~ complete;original_location=328331..328789;owner=coffea | |
| 2265 chr1 manual_curation exon 3509136 3509594 . + . Parent=GSCOCT00019272001 | |
| 2266 chr1 manual_curation CDS 3509136 3509594 . + 0 Parent=GSCOCT00019272001 | |
| 2267 chr1 manual_curation gene 3515894 3516352 . + . ID=GSCOCG00019273001;Name=Cc01_g01940 | |
| 2268 chr1 manual_curation mRNA 3515894 3516352 . + . ID=GSCOCT00019273001;Parent=GSCOCG00019273001;Name=Cc01_g01940 | |
| 2269 chr1 manual_curation polypeptide 3515894 3516352 . + . ID=GSCOCP00019273001;Dbxref=GENE3D:G3DSA:3.30.710.10,InterPro:IPR001232,InterPro:IPR011333,InterPro:IPR016072,InterPro:IPR016073,InterPro:IPR016897,PANTHER:PTHR11165,PFAM:PF01466,PFAM:PF03931,PIR:PIRSF028729,SMART:SM00512,SUPERFAMILY:SSF54695,SUPERFAMILY:SSF81382,SwissProt:Q9FHW7,SwissProt:Q9LNT9,SwissProt:Q9SL93,TAIR:AT1G20140.1,TAIR:AT2G25700.1,TAIR:AT5G42190.1,TrEMBL:A5C7K8,TrEMBL:B6CNU8,TrEMBL:C3V9V9;Derives_from=GSCOCT00019273001;Name=Cc01_g01940;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0006511,CC_EC_number:missing_EC_number,PRODUCT:SKP1-like protein 4,CC_functional_completeness:complete,CC_gene:ASK4,CC_gene:ASK3,CC_gene:SKP1B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019273001~ SKP1-like protein 4~ ASK4~ complete;original_location=335089..335547;owner=coffea | |
| 2270 chr1 manual_curation exon 3515894 3516352 . + . Parent=GSCOCT00019273001 | |
| 2271 chr1 manual_curation CDS 3515894 3516352 . + 0 Parent=GSCOCT00019273001 | |
| 2272 chr1 manual_curation gene 3542692 3544294 . + . ID=GSCOCG00019274001;Name=Cc01_g01950 | |
| 2273 chr1 manual_curation mRNA 3542692 3544294 . + . ID=GSCOCT00019274001;Parent=GSCOCG00019274001;Name=Cc01_g01950 | |
| 2274 chr1 manual_curation polypeptide 3543207 3544097 . + . ID=GSCOCP00019274001;Dbxref=InterPro:IPR006514,InterPro:IPR021148,PFAM:PF04669,TAIR:AT1G09610.1,TAIR:AT1G27930.1,TAIR:AT1G67330.1,TIGRFAMs:TIGR01627,TrEMBL:G7JBY4,TrEMBL:I1LN75,TrEMBL:I1MYE7;Derives_from=GSCOCT00019274001;Name=Cc01_g01950;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF579),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019274001~ Protein of unknown function (DUF579)~ unknown_gene~ complete;original_location=362402..363292;owner=coffea | |
| 2275 chr1 manual_curation exon 3542692 3542786 . + . Parent=GSCOCT00019274001 | |
| 2276 chr1 manual_curation exon 3543088 3544294 . + . Parent=GSCOCT00019274001 | |
| 2277 chr1 manual_curation CDS 3543207 3544097 . + 0 Parent=GSCOCT00019274001 | |
| 2278 chr1 manual_curation gene 3563332 3563853 . + . ID=GSCOCG00019276001;Name=Cc01_g01960 | |
| 2279 chr1 manual_curation mRNA 3563332 3563853 . + . ID=GSCOCT00019276001;Parent=GSCOCG00019276001;Name=Cc01_g01960 | |
| 2280 chr1 manual_curation polypeptide 3563332 3563853 . + . ID=GSCOCP00019276001;Dbxref=InterPro:IPR006514,InterPro:IPR021148,PFAM:PF04669,TAIR:AT1G09610.1,TAIR:AT1G27930.1,TAIR:AT1G67330.1,TIGRFAMs:TIGR01627,TrEMBL:G7JBY4,TrEMBL:I1LN75,TrEMBL:I1MYE7;Derives_from=GSCOCT00019276001;Name=Cc01_g01960;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF579),CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019276001~ Protein of unknown function (DUF579)~ unknown_gene~ fragment;original_location=382527..383048;owner=coffea | |
| 2281 chr1 manual_curation exon 3563332 3563853 . + . Parent=GSCOCT00019276001 | |
| 2282 chr1 manual_curation CDS 3563332 3563853 . + 0 Parent=GSCOCT00019276001 | |
| 2283 chr1 manual_curation gene 3572707 3574523 . - . ID=GSCOCG00019277001;Name=Cc01_g01970 | |
| 2284 chr1 manual_curation mRNA 3572707 3574523 . - . ID=GSCOCT00019277001;Parent=GSCOCG00019277001;Name=Cc01_g01970 | |
| 2285 chr1 manual_curation polypeptide 3572828 3574523 . - . ID=GSCOCP00019277001;Dbxref=InterPro:IPR001810,InterPro:IPR013596,InterPro:IPR022364,PFAM:PF00646,PFAM:PF08387,PROFILE:PS50181,SUPERFAMILY:SSF81383,SwissProt:Q8L7H1,SwissProt:Q94B46,SwissProt:Q9FJ30,TAIR:AT4G14096.1,TAIR:AT4G14103.2,TAIR:AT5G41840.1,TrEMBL:A5BLF6,TrEMBL:F4JUK8,TrEMBL:F6HR85;Derives_from=GSCOCT00019277001;Name=Cc01_g01970;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative F-box/LRR-repeat protein At4g14096,CC_functional_completeness:complete,CC_gene:At5g41840,CC_gene:At4g14096,CC_gene:At4g14103;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019277001~ Putative F-box/LRR-repeat protein At4g14096~ At5g41840~ complete;original_location=complement(join(392696..393718%2C392430..392594%2C392023..392355));owner=coffea | |
| 2286 chr1 manual_curation exon 3572707 3573160 . - . Parent=GSCOCT00019277001 | |
| 2287 chr1 manual_curation exon 3573235 3573399 . - . Parent=GSCOCT00019277001 | |
| 2288 chr1 manual_curation exon 3573501 3574523 . - . Parent=GSCOCT00019277001 | |
| 2289 chr1 manual_curation CDS 3572828 3573160 . - 0 Parent=GSCOCT00019277001 | |
| 2290 chr1 manual_curation CDS 3573235 3573399 . - 0 Parent=GSCOCT00019277001 | |
| 2291 chr1 manual_curation CDS 3573501 3574523 . - 0 Parent=GSCOCT00019277001 | |
| 2292 chr1 manual_curation gene 3646440 3650344 . + . ID=GSCOCG00019280001;Name=Cc01_g01980 | |
| 2293 chr1 manual_curation mRNA 3646440 3650344 . + . ID=GSCOCT00019280001;Parent=GSCOCG00019280001;Name=Cc01_g01980 | |
| 2294 chr1 manual_curation polypeptide 3649209 3649766 . + . ID=GSCOCP00019280001;Dbxref=InterPro:IPR006797,PFAM:PF04707,PROFILE:PS50904,SwissProt:Q4R5S9,SwissProt:Q54G07,SwissProt:Q58DB0,TAIR:AT5G13070.1,TrEMBL:B9RI96,TrEMBL:B9TAM4,TrEMBL:D7SL81;Derives_from=GSCOCT00019280001;Name=Cc01_g01980;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein slowmo homolog,CC_functional_completeness:fragment,CC_gene:slmo,CC_gene:SLMO2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019280001~ Putative Protein slowmo homolog~ slmo~ fragment;original_location=468404..468961;owner=coffea | |
| 2295 chr1 manual_curation exon 3646440 3646787 . + . Parent=GSCOCT00019280001 | |
| 2296 chr1 manual_curation exon 3649202 3650344 . + . Parent=GSCOCT00019280001 | |
| 2297 chr1 manual_curation CDS 3649209 3649766 . + 0 Parent=GSCOCT00019280001 | |
| 2298 chr1 manual_curation gene 3660258 3661577 . - . ID=GSCOCG00019283001;Name=Cc01_g01990 | |
| 2299 chr1 manual_curation mRNA 3660258 3661577 . - . ID=GSCOCT00019283001;Parent=GSCOCG00019283001;Name=Cc01_g01990 | |
| 2300 chr1 manual_curation polypeptide 3660363 3661577 . - . ID=GSCOCP00019283001;Derives_from=GSCOCT00019283001;Name=Cc01_g01990;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019283001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(480501..480772%2C480066..480089%2C479951..479987%2C479558..479824));owner=coffea | |
| 2301 chr1 manual_curation exon 3660258 3660629 . - . Parent=GSCOCT00019283001 | |
| 2302 chr1 manual_curation exon 3660756 3660792 . - . Parent=GSCOCT00019283001 | |
| 2303 chr1 manual_curation exon 3660871 3660894 . - . Parent=GSCOCT00019283001 | |
| 2304 chr1 manual_curation exon 3661306 3661577 . - . Parent=GSCOCT00019283001 | |
| 2305 chr1 manual_curation CDS 3660363 3660629 . - 0 Parent=GSCOCT00019283001 | |
| 2306 chr1 manual_curation CDS 3660756 3660792 . - 2 Parent=GSCOCT00019283001 | |
| 2307 chr1 manual_curation CDS 3660871 3660894 . - 2 Parent=GSCOCT00019283001 | |
| 2308 chr1 manual_curation CDS 3661306 3661577 . - 0 Parent=GSCOCT00019283001 | |
| 2309 chr1 manual_curation gene 3663104 3664438 . - . ID=GSCOCG00019285001;Name=Cc01_g02000 | |
| 2310 chr1 manual_curation mRNA 3663104 3664438 . - . ID=GSCOCT00019285001;Parent=GSCOCG00019285001;Name=Cc01_g02000 | |
| 2311 chr1 manual_curation polypeptide 3663306 3663578 . - . ID=GSCOCP00019285001;Dbxref=InterPro:IPR013596,PFAM:PF08387;Derives_from=GSCOCT00019285001;Name=Cc01_g02000;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019285001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(482753..482773%2C482501..482674));owner=coffea | |
| 2312 chr1 manual_curation exon 3663104 3663479 . - . Parent=GSCOCT00019285001 | |
| 2313 chr1 manual_curation exon 3663558 3664438 . - . Parent=GSCOCT00019285001 | |
| 2314 chr1 manual_curation CDS 3663306 3663479 . - 0 Parent=GSCOCT00019285001 | |
| 2315 chr1 manual_curation CDS 3663558 3663578 . - 0 Parent=GSCOCT00019285001 | |
| 2316 chr1 manual_curation gene 3695283 3704752 . - . ID=GSCOCG00019289001;Name=Cc01_g02010 | |
| 2317 chr1 manual_curation mRNA 3695283 3704752 . - . ID=GSCOCT00019289001;Parent=GSCOCG00019289001;Name=Cc01_g02010 | |
| 2318 chr1 manual_curation polypeptide 3695283 3704752 . - . ID=GSCOCP00019289001;Dbxref=InterPro:IPR000873,InterPro:IPR020845,PFAM:PF00501,PROSITE:PS00455,SwissProt:F4KBF3,SwissProt:Q84P17,SwissProt:Q88EH6,TAIR:AT1G55320.1,TAIR:AT5G23050.1,TAIR:AT5G36880.2,TrEMBL:D7SLH9,TrEMBL:H9A8L3,TrEMBL:I1KSB3;Derives_from=GSCOCT00019289001;Name=Cc01_g02010;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,CC_EC_number:6.2.1.1,PRODUCT:Probable acyl-activating enzyme 18%2C peroxisomal,CC_functional_completeness:complete,CC_gene:AAE18,CC_gene:AAE17,CC_gene:acsA1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019289001~ Probable acyl-activating enzyme 18%2C peroxisomal~ AAE18~ complete;original_location=complement(join(523655..523947%2C521745..521892%2C521395..521654%2C520396..520597%2C519692..519732%2C518571..518699%2C518349..518422%2C518021..518241%2C517738..517832%2C517442..517658%2C517070..517195%2C516060..516158%2C515473..515679%2C514478..514591));owner=coffea | |
| 2319 chr1 manual_curation exon 3695283 3695396 . - . Parent=GSCOCT00019289001 | |
| 2320 chr1 manual_curation exon 3696278 3696484 . - . Parent=GSCOCT00019289001 | |
| 2321 chr1 manual_curation exon 3696865 3696963 . - . Parent=GSCOCT00019289001 | |
| 2322 chr1 manual_curation exon 3697875 3698000 . - . Parent=GSCOCT00019289001 | |
| 2323 chr1 manual_curation exon 3698247 3698463 . - . Parent=GSCOCT00019289001 | |
| 2324 chr1 manual_curation exon 3698543 3698637 . - . Parent=GSCOCT00019289001 | |
| 2325 chr1 manual_curation exon 3698826 3699046 . - . Parent=GSCOCT00019289001 | |
| 2326 chr1 manual_curation exon 3699154 3699227 . - . Parent=GSCOCT00019289001 | |
| 2327 chr1 manual_curation exon 3699376 3699504 . - . Parent=GSCOCT00019289001 | |
| 2328 chr1 manual_curation exon 3700497 3700537 . - . Parent=GSCOCT00019289001 | |
| 2329 chr1 manual_curation exon 3701201 3701402 . - . Parent=GSCOCT00019289001 | |
| 2330 chr1 manual_curation exon 3702200 3702459 . - . Parent=GSCOCT00019289001 | |
| 2331 chr1 manual_curation exon 3702550 3702697 . - . Parent=GSCOCT00019289001 | |
| 2332 chr1 manual_curation exon 3704460 3704752 . - . Parent=GSCOCT00019289001 | |
| 2333 chr1 manual_curation CDS 3695283 3695396 . - 0 Parent=GSCOCT00019289001 | |
| 2334 chr1 manual_curation CDS 3696278 3696484 . - 0 Parent=GSCOCT00019289001 | |
| 2335 chr1 manual_curation CDS 3696865 3696963 . - 0 Parent=GSCOCT00019289001 | |
| 2336 chr1 manual_curation CDS 3697875 3698000 . - 0 Parent=GSCOCT00019289001 | |
| 2337 chr1 manual_curation CDS 3698247 3698463 . - 2 Parent=GSCOCT00019289001 | |
| 2338 chr1 manual_curation CDS 3698543 3698637 . - 0 Parent=GSCOCT00019289001 | |
| 2339 chr1 manual_curation CDS 3698826 3699046 . - 1 Parent=GSCOCT00019289001 | |
| 2340 chr1 manual_curation CDS 3699154 3699227 . - 2 Parent=GSCOCT00019289001 | |
| 2341 chr1 manual_curation CDS 3699376 3699504 . - 2 Parent=GSCOCT00019289001 | |
| 2342 chr1 manual_curation CDS 3700497 3700537 . - 0 Parent=GSCOCT00019289001 | |
| 2343 chr1 manual_curation CDS 3701201 3701402 . - 2 Parent=GSCOCT00019289001 | |
| 2344 chr1 manual_curation CDS 3702200 3702459 . - 0 Parent=GSCOCT00019289001 | |
| 2345 chr1 manual_curation CDS 3702550 3702697 . - 2 Parent=GSCOCT00019289001 | |
| 2346 chr1 manual_curation CDS 3704460 3704752 . - 0 Parent=GSCOCT00019289001 | |
| 2347 chr1 manual_curation gene 3724542 3730216 . + . ID=GSCOCG00019293001;Name=Cc01_g02020 | |
| 2348 chr1 manual_curation mRNA 3724542 3730216 . + . ID=GSCOCT00019293001;Parent=GSCOCG00019293001;Name=Cc01_g02020 | |
| 2349 chr1 manual_curation polypeptide 3725155 3728988 . + . ID=GSCOCP00019293001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q7XA39,SwissProt:Q7XA40,SwissProt:Q7XA42,TAIR:AT3G07040.1,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TrEMBL:B9IBB8,TrEMBL:B9IP06,TrEMBL:Q7XKH0;Derives_from=GSCOCT00019293001;Name=Cc01_g02020;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance protein RGA3,CC_functional_completeness:complete,CC_gene:RGA3,CC_gene:RGA4,CC_gene:RGA1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019293001~ Putative disease resistance protein RGA3~ RGA3~ complete;original_location=join(544350..545301%2C545731..546159%2C546199..546523%2C546632..547443%2C548167..548183);owner=coffea | |
| 2350 chr1 manual_curation exon 3729538 3729618 . + . Parent=GSCOCT00019293001 | |
| 2351 chr1 manual_curation exon 3729736 3730216 . + . Parent=GSCOCT00019293001 | |
| 2352 chr1 manual_curation exon 3724542 3726106 . + . Parent=GSCOCT00019293001 | |
| 2353 chr1 manual_curation exon 3726536 3726964 . + . Parent=GSCOCT00019293001 | |
| 2354 chr1 manual_curation exon 3727004 3727328 . + . Parent=GSCOCT00019293001 | |
| 2355 chr1 manual_curation exon 3727437 3728248 . + . Parent=GSCOCT00019293001 | |
| 2356 chr1 manual_curation exon 3728972 3729149 . + . Parent=GSCOCT00019293001 | |
| 2357 chr1 manual_curation CDS 3725155 3726106 . + 0 Parent=GSCOCT00019293001 | |
| 2358 chr1 manual_curation CDS 3726536 3726964 . + 1 Parent=GSCOCT00019293001 | |
| 2359 chr1 manual_curation CDS 3727004 3727328 . + 1 Parent=GSCOCT00019293001 | |
| 2360 chr1 manual_curation CDS 3727437 3728248 . + 2 Parent=GSCOCT00019293001 | |
| 2361 chr1 manual_curation CDS 3728972 3728988 . + 1 Parent=GSCOCT00019293001 | |
| 2362 chr1 manual_curation gene 3740415 3741661 . + . ID=GSCOCG00019295001;Name=Cc01_g02030 | |
| 2363 chr1 manual_curation mRNA 3740415 3741661 . + . ID=GSCOCT00019295001;Parent=GSCOCG00019295001;Name=Cc01_g02030 | |
| 2364 chr1 manual_curation polypeptide 3740552 3740842 . + . ID=GSCOCP00019295001;Derives_from=GSCOCT00019295001;Name=Cc01_g02030;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019295001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=559747..560037;owner=coffea | |
| 2365 chr1 manual_curation exon 3740415 3741661 . + . Parent=GSCOCT00019295001 | |
| 2366 chr1 manual_curation CDS 3740552 3740842 . + 0 Parent=GSCOCT00019295001 | |
| 2367 chr1 manual_curation gene 3741767 3750933 . - . ID=GSCOCG00019296001;Name=Cc01_g02040 | |
| 2368 chr1 manual_curation mRNA 3741767 3750933 . - . ID=GSCOCT00019296001;Parent=GSCOCG00019296001;Name=Cc01_g02040 | |
| 2369 chr1 manual_curation polypeptide 3741767 3750740 . - . ID=GSCOCP00019296001;Dbxref=InterPro:IPR000873,InterPro:IPR020845,PFAM:PF00501,PROSITE:PS00455,SwissProt:F4KBF3,SwissProt:Q84P17,SwissProt:Q88EH6,TAIR:AT1G55320.1,TAIR:AT5G23050.1,TAIR:AT5G36880.2,TrEMBL:D7SLH9,TrEMBL:H9A8L2,TrEMBL:H9A8L3;Derives_from=GSCOCT00019296001;Name=Cc01_g02040;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,CC_EC_number:6.2.1.1,PRODUCT:Probable acyl-activating enzyme 18%2C peroxisomal,CC_functional_completeness:complete,CC_gene:AAE18,CC_gene:AAE17,CC_gene:acsA1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019296001~ Probable acyl-activating enzyme 18%2C peroxisomal~ AAE18~ complete;original_location=complement(join(569640..569935%2C567709..567856%2C567359..567618%2C566369..566570%2C565836..565876%2C564886..565014%2C564664..564737%2C564337..564557%2C564053..564147%2C563757..563973%2C563383..563508%2C562568..562666%2C561982..562188%2C560962..561075));owner=coffea | |
| 2370 chr1 manual_curation exon 3741767 3741880 . - . Parent=GSCOCT00019296001 | |
| 2371 chr1 manual_curation exon 3742787 3742993 . - . Parent=GSCOCT00019296001 | |
| 2372 chr1 manual_curation exon 3743373 3743471 . - . Parent=GSCOCT00019296001 | |
| 2373 chr1 manual_curation exon 3744188 3744313 . - . Parent=GSCOCT00019296001 | |
| 2374 chr1 manual_curation exon 3744562 3744778 . - . Parent=GSCOCT00019296001 | |
| 2375 chr1 manual_curation exon 3744858 3744952 . - . Parent=GSCOCT00019296001 | |
| 2376 chr1 manual_curation exon 3745142 3745362 . - . Parent=GSCOCT00019296001 | |
| 2377 chr1 manual_curation exon 3745469 3745542 . - . Parent=GSCOCT00019296001 | |
| 2378 chr1 manual_curation exon 3745691 3745819 . - . Parent=GSCOCT00019296001 | |
| 2379 chr1 manual_curation exon 3746641 3746681 . - . Parent=GSCOCT00019296001 | |
| 2380 chr1 manual_curation exon 3747174 3747375 . - . Parent=GSCOCT00019296001 | |
| 2381 chr1 manual_curation exon 3748164 3748423 . - . Parent=GSCOCT00019296001 | |
| 2382 chr1 manual_curation exon 3748514 3748661 . - . Parent=GSCOCT00019296001 | |
| 2383 chr1 manual_curation exon 3750445 3750933 . - . Parent=GSCOCT00019296001 | |
| 2384 chr1 manual_curation CDS 3741767 3741880 . - 0 Parent=GSCOCT00019296001 | |
| 2385 chr1 manual_curation CDS 3742787 3742993 . - 0 Parent=GSCOCT00019296001 | |
| 2386 chr1 manual_curation CDS 3743373 3743471 . - 0 Parent=GSCOCT00019296001 | |
| 2387 chr1 manual_curation CDS 3744188 3744313 . - 0 Parent=GSCOCT00019296001 | |
| 2388 chr1 manual_curation CDS 3744562 3744778 . - 2 Parent=GSCOCT00019296001 | |
| 2389 chr1 manual_curation CDS 3744858 3744952 . - 0 Parent=GSCOCT00019296001 | |
| 2390 chr1 manual_curation CDS 3745142 3745362 . - 1 Parent=GSCOCT00019296001 | |
| 2391 chr1 manual_curation CDS 3745469 3745542 . - 2 Parent=GSCOCT00019296001 | |
| 2392 chr1 manual_curation CDS 3745691 3745819 . - 2 Parent=GSCOCT00019296001 | |
| 2393 chr1 manual_curation CDS 3746641 3746681 . - 0 Parent=GSCOCT00019296001 | |
| 2394 chr1 manual_curation CDS 3747174 3747375 . - 2 Parent=GSCOCT00019296001 | |
| 2395 chr1 manual_curation CDS 3748164 3748423 . - 0 Parent=GSCOCT00019296001 | |
| 2396 chr1 manual_curation CDS 3748514 3748661 . - 2 Parent=GSCOCT00019296001 | |
| 2397 chr1 manual_curation CDS 3750445 3750740 . - 0 Parent=GSCOCT00019296001 | |
| 2398 chr1 manual_curation gene 3758500 3763454 . + . ID=GSCOCG00019297001;Name=Cc01_g02050 | |
| 2399 chr1 manual_curation mRNA 3758500 3763454 . + . ID=GSCOCT00019297001;Parent=GSCOCG00019297001;Name=Cc01_g02050 | |
| 2400 chr1 manual_curation polypeptide 3759569 3763127 . + . ID=GSCOCP00019297001;Dbxref=GENE3D:G3DSA:2.30.170.20,InterPro:IPR000988,InterPro:IPR011017,PANTHER:PTHR10792,PFAM:PF01246,PROSITE:PS01073,SMART:SM00746,SwissProt:O22165,SwissProt:Q86B05,SwissProt:Q99L28,TAIR:AT2G36620.1,TAIR:AT2G44860.1,TAIR:AT3G53020.1,TrEMBL:D7TJ26,TrEMBL:I1LRC9;Derives_from=GSCOCT00019297001;Name=Cc01_g02050;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:Probable ribosome biogenesis protein RLP24,CC_functional_completeness:complete,CC_gene:At2g44860,CC_gene:rlp24,CC_gene:Rsl24d1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019297001~ Probable ribosome biogenesis protein RLP24~ At2g44860~ complete;original_location=join(578764..578844%2C581679..581792%2C581912..582048%2C582151..582322);owner=coffea | |
| 2401 chr1 manual_curation exon 3758500 3758558 . + . Parent=GSCOCT00019297001 | |
| 2402 chr1 manual_curation exon 3759543 3759649 . + . Parent=GSCOCT00019297001 | |
| 2403 chr1 manual_curation exon 3762484 3762597 . + . Parent=GSCOCT00019297001 | |
| 2404 chr1 manual_curation exon 3762717 3762853 . + . Parent=GSCOCT00019297001 | |
| 2405 chr1 manual_curation exon 3762956 3763454 . + . Parent=GSCOCT00019297001 | |
| 2406 chr1 manual_curation CDS 3759569 3759649 . + 0 Parent=GSCOCT00019297001 | |
| 2407 chr1 manual_curation CDS 3762484 3762597 . + 0 Parent=GSCOCT00019297001 | |
| 2408 chr1 manual_curation CDS 3762717 3762853 . + 0 Parent=GSCOCT00019297001 | |
| 2409 chr1 manual_curation CDS 3762956 3763127 . + 2 Parent=GSCOCT00019297001 | |
| 2410 chr1 manual_curation gene 3766049 3774825 . + . ID=GSCOCG00019298001;Name=Cc01_g02060 | |
| 2411 chr1 manual_curation mRNA 3766049 3774825 . + . ID=GSCOCT00019298001;Parent=GSCOCG00019298001;Name=Cc01_g02060 | |
| 2412 chr1 manual_curation polypeptide 3766049 3774825 . + . ID=GSCOCP00019298001;Dbxref=GENE3D:G3DSA:2.60.120.10,InterPro:IPR001929,InterPro:IPR006045,InterPro:IPR011051,InterPro:IPR014710,InterPro:IPR019780,PFAM:PF00190,PRINTS:PR00325,PROSITE:PS00725,SMART:SM00835,SUPERFAMILY:SSF51182,SwissProt:P92997,SwissProt:Q9FID0,SwissProt:Q9SFF9,TAIR:AT3G05950.1,TAIR:AT5G39110.1,TAIR:AT5G39150.1,TrEMBL:A5AJD2,TrEMBL:F6I2J5,TrEMBL:F6I2J6;Derives_from=GSCOCT00019298001;Name=Cc01_g02060;Ontology_term=CC_evidence_code:ISS,GO:0030145,GO:0045735,GO:0048046,CC_EC_number:1.2.3.4,PRODUCT:Germin-like protein subfamily 1 member 7,CC_functional_completeness:complete,CC_gene:At3g05950,CC_gene:At5g39110,CC_gene:GLP6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019298001~ Germin-like protein subfamily 1 member 7~ At3g05950~ complete;original_location=join(585244..585364%2C585480..586014%2C586086..586098%2C588582..588726%2C588829..589346%2C592112..592138%2C593205..593349%2C593452..594020);owner=coffea | |
| 2413 chr1 manual_curation exon 3766049 3766169 . + . Parent=GSCOCT00019298001 | |
| 2414 chr1 manual_curation exon 3766285 3766819 . + . Parent=GSCOCT00019298001 | |
| 2415 chr1 manual_curation exon 3766891 3766903 . + . Parent=GSCOCT00019298001 | |
| 2416 chr1 manual_curation exon 3769387 3769531 . + . Parent=GSCOCT00019298001 | |
| 2417 chr1 manual_curation exon 3769634 3770151 . + . Parent=GSCOCT00019298001 | |
| 2418 chr1 manual_curation exon 3772917 3772943 . + . Parent=GSCOCT00019298001 | |
| 2419 chr1 manual_curation exon 3774010 3774154 . + . Parent=GSCOCT00019298001 | |
| 2420 chr1 manual_curation exon 3774257 3774825 . + . Parent=GSCOCT00019298001 | |
| 2421 chr1 manual_curation CDS 3766049 3766169 . + 0 Parent=GSCOCT00019298001 | |
| 2422 chr1 manual_curation CDS 3766285 3766819 . + 1 Parent=GSCOCT00019298001 | |
| 2423 chr1 manual_curation CDS 3766891 3766903 . + 2 Parent=GSCOCT00019298001 | |
| 2424 chr1 manual_curation CDS 3769387 3769531 . + 0 Parent=GSCOCT00019298001 | |
| 2425 chr1 manual_curation CDS 3769634 3770151 . + 1 Parent=GSCOCT00019298001 | |
| 2426 chr1 manual_curation CDS 3772917 3772943 . + 0 Parent=GSCOCT00019298001 | |
| 2427 chr1 manual_curation CDS 3774010 3774154 . + 0 Parent=GSCOCT00019298001 | |
| 2428 chr1 manual_curation CDS 3774257 3774825 . + 1 Parent=GSCOCT00019298001 | |
| 2429 chr1 manual_curation gene 3858070 3858905 . + . ID=GSCOCG00019299001;Name=Cc01_g02070 | |
| 2430 chr1 manual_curation mRNA 3858070 3858905 . + . ID=GSCOCT00019299001;Parent=GSCOCG00019299001;Name=Cc01_g02070 | |
| 2431 chr1 manual_curation polypeptide 3858070 3858905 . + . ID=GSCOCP00019299001;Dbxref=GENE3D:G3DSA:2.60.120.10,InterPro:IPR001929,InterPro:IPR006045,InterPro:IPR011051,InterPro:IPR014710,InterPro:IPR019780,PFAM:PF00190,PRINTS:PR00325,PROSITE:PS00725,SMART:SM00835,SUPERFAMILY:SSF51182,SwissProt:P92997,SwissProt:Q9FID0,SwissProt:Q9SFF9,TAIR:AT3G05950.1,TAIR:AT5G39110.1,TAIR:AT5G39150.1,TrEMBL:A5AJD2,TrEMBL:F6I2J5,TrEMBL:F6I2J6;Derives_from=GSCOCT00019299001;Name=Cc01_g02070;Ontology_term=CC_evidence_code:ISS,GO:0030145,GO:0045735,GO:0048046,CC_EC_number:1.2.3.4,PRODUCT:Germin-like protein subfamily 1 member 7,CC_functional_completeness:complete,CC_gene:At3g05950,CC_gene:At5g39110,CC_gene:GLP6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019299001~ Germin-like protein subfamily 1 member 7~ At3g05950~ complete;original_location=join(677265..677385%2C677529..678100);owner=coffea | |
| 2432 chr1 manual_curation exon 3858070 3858190 . + . Parent=GSCOCT00019299001 | |
| 2433 chr1 manual_curation exon 3858334 3858905 . + . Parent=GSCOCT00019299001 | |
| 2434 chr1 manual_curation CDS 3858070 3858190 . + 0 Parent=GSCOCT00019299001 | |
| 2435 chr1 manual_curation CDS 3858334 3858905 . + 1 Parent=GSCOCT00019299001 | |
| 2436 chr1 manual_curation gene 3877081 3877872 . + . ID=GSCOCG00019300001;Name=Cc01_g02080 | |
| 2437 chr1 manual_curation mRNA 3877081 3877872 . + . ID=GSCOCT00019300001;Parent=GSCOCG00019300001;Name=Cc01_g02080 | |
| 2438 chr1 manual_curation polypeptide 3877081 3877872 . + . ID=GSCOCP00019300001;Dbxref=GENE3D:G3DSA:2.60.120.10,InterPro:IPR001929,InterPro:IPR006045,InterPro:IPR011051,InterPro:IPR014710,InterPro:IPR019780,PFAM:PF00190,PRINTS:PR00325,PROSITE:PS00725,SMART:SM00835,SUPERFAMILY:SSF51182,SwissProt:P92997,SwissProt:Q9FID0,SwissProt:Q9SFF9,TAIR:AT3G05950.1,TAIR:AT5G39110.1,TAIR:AT5G39150.1,TrEMBL:A5AJD2,TrEMBL:F6I2J5,TrEMBL:F6I2J6;Derives_from=GSCOCT00019300001;Name=Cc01_g02080;Ontology_term=CC_evidence_code:ISS,GO:0030145,GO:0045735,GO:0048046,CC_EC_number:1.2.3.4,PRODUCT:Germin-like protein subfamily 1 member 7,CC_functional_completeness:complete,CC_gene:At3g05950,CC_gene:At5g39110,CC_gene:GLP6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019300001~ Germin-like protein subfamily 1 member 7~ At3g05950~ complete;original_location=join(696276..696396%2C696499..697067);owner=coffea | |
| 2439 chr1 manual_curation exon 3877081 3877201 . + . Parent=GSCOCT00019300001 | |
| 2440 chr1 manual_curation exon 3877304 3877872 . + . Parent=GSCOCT00019300001 | |
| 2441 chr1 manual_curation CDS 3877081 3877201 . + 0 Parent=GSCOCT00019300001 | |
| 2442 chr1 manual_curation CDS 3877304 3877872 . + 1 Parent=GSCOCT00019300001 | |
| 2443 chr1 manual_curation gene 3883059 3887790 . + . ID=GSCOCG00019301001;Name=Cc01_g02090 | |
| 2444 chr1 manual_curation mRNA 3883059 3887790 . + . ID=GSCOCT00019301001;Parent=GSCOCG00019301001;Name=Cc01_g02090 | |
| 2445 chr1 manual_curation polypeptide 3883059 3887790 . + . ID=GSCOCP00019301001;Dbxref=GENE3D:G3DSA:2.60.120.10,InterPro:IPR001929,InterPro:IPR006045,InterPro:IPR011051,InterPro:IPR014710,InterPro:IPR019780,PFAM:PF00190,PRINTS:PR00325,PROSITE:PS00725,SMART:SM00835,SUPERFAMILY:SSF51182,SwissProt:P92997,SwissProt:Q9FID0,SwissProt:Q9SFF9,TAIR:AT3G05950.1,TAIR:AT5G39110.1,TAIR:AT5G39160.1,TrEMBL:F6HEI5,TrEMBL:F6I2J5,TrEMBL:F6I2J6;Derives_from=GSCOCT00019301001;Name=Cc01_g02090;Ontology_term=CC_evidence_code:ISS,GO:0030145,GO:0045735,GO:0048046,CC_EC_number:1.2.3.4,PRODUCT:Germin-like protein subfamily 1 member 7,CC_functional_completeness:complete,CC_gene:At3g05950,CC_gene:At5g39110,CC_gene:GLP6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019301001~ Germin-like protein subfamily 1 member 7~ At3g05950~ complete;original_location=join(702254..702374%2C702507..703053%2C705206..705289%2C706146..706288%2C706414..706985);owner=coffea | |
| 2446 chr1 manual_curation exon 3883059 3883179 . + . Parent=GSCOCT00019301001 | |
| 2447 chr1 manual_curation exon 3883312 3883858 . + . Parent=GSCOCT00019301001 | |
| 2448 chr1 manual_curation exon 3886011 3886094 . + . Parent=GSCOCT00019301001 | |
| 2449 chr1 manual_curation exon 3886951 3887093 . + . Parent=GSCOCT00019301001 | |
| 2450 chr1 manual_curation exon 3887219 3887790 . + . Parent=GSCOCT00019301001 | |
| 2451 chr1 manual_curation CDS 3883059 3883179 . + 0 Parent=GSCOCT00019301001 | |
| 2452 chr1 manual_curation CDS 3883312 3883858 . + 1 Parent=GSCOCT00019301001 | |
| 2453 chr1 manual_curation CDS 3886011 3886094 . + 2 Parent=GSCOCT00019301001 | |
| 2454 chr1 manual_curation CDS 3886951 3887093 . + 2 Parent=GSCOCT00019301001 | |
| 2455 chr1 manual_curation CDS 3887219 3887790 . + 1 Parent=GSCOCT00019301001 | |
| 2456 chr1 manual_curation gene 3898353 3899160 . + . ID=GSCOCG00019303001;Name=Cc01_g02100 | |
| 2457 chr1 manual_curation mRNA 3898353 3899160 . + . ID=GSCOCT00019303001;Parent=GSCOCG00019303001;Name=Cc01_g02100 | |
| 2458 chr1 manual_curation polypeptide 3898353 3899160 . + . ID=GSCOCP00019303001;Dbxref=GENE3D:G3DSA:2.60.120.10,InterPro:IPR001929,InterPro:IPR006045,InterPro:IPR011051,InterPro:IPR014710,InterPro:IPR019780,PFAM:PF00190,PRINTS:PR00325,PROSITE:PS00725,SMART:SM00835,SUPERFAMILY:SSF51182,SwissProt:P92999,SwissProt:Q9FID0,SwissProt:Q9SFF9,TAIR:AT3G05950.1,TAIR:AT5G39110.1,TAIR:AT5G39160.1,TrEMBL:A5AJD2,TrEMBL:F6I2J5,TrEMBL:F6I2J6;Derives_from=GSCOCT00019303001;Name=Cc01_g02100;Ontology_term=CC_evidence_code:ISS,GO:0030145,GO:0045735,GO:0048046,CC_EC_number:1.2.3.4,PRODUCT:Germin-like protein subfamily 1 member 7,CC_functional_completeness:complete,CC_gene:At3g05950,CC_gene:At5g39110,CC_gene:GLP2A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019303001~ Germin-like protein subfamily 1 member 7~ At3g05950~ complete;original_location=join(717548..717674%2C717784..718355);owner=coffea | |
| 2459 chr1 manual_curation exon 3898353 3898479 . + . Parent=GSCOCT00019303001 | |
| 2460 chr1 manual_curation exon 3898589 3899160 . + . Parent=GSCOCT00019303001 | |
| 2461 chr1 manual_curation CDS 3898353 3898479 . + 0 Parent=GSCOCT00019303001 | |
| 2462 chr1 manual_curation CDS 3898589 3899160 . + 1 Parent=GSCOCT00019303001 | |
| 2463 chr1 manual_curation gene 3920040 3920867 . + . ID=GSCOCG00019304001;Name=Cc01_g02110 | |
| 2464 chr1 manual_curation mRNA 3920040 3920867 . + . ID=GSCOCT00019304001;Parent=GSCOCG00019304001;Name=Cc01_g02110 | |
| 2465 chr1 manual_curation polypeptide 3920040 3920867 . + . ID=GSCOCP00019304001;Dbxref=GENE3D:G3DSA:2.60.120.10,InterPro:IPR001929,InterPro:IPR006045,InterPro:IPR011051,InterPro:IPR014710,InterPro:IPR019780,PFAM:PF00190,PRINTS:PR00325,PROSITE:PS00725,SMART:SM00835,SUPERFAMILY:SSF51182,SwissProt:P92999,SwissProt:Q9FID0,SwissProt:Q9SFF9,TAIR:AT3G05950.1,TAIR:AT5G39110.1,TAIR:AT5G39160.1,TrEMBL:F6HEI5,TrEMBL:F6I2J5,TrEMBL:F6I2J6;Derives_from=GSCOCT00019304001;Name=Cc01_g02110;Ontology_term=CC_evidence_code:ISS,GO:0030145,GO:0045735,GO:0048046,CC_EC_number:1.2.3.4,PRODUCT:Germin-like protein subfamily 1 member 7,CC_functional_completeness:complete,CC_gene:At3g05950,CC_gene:At5g39110,CC_gene:GLP2A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019304001~ Germin-like protein subfamily 1 member 7~ At3g05950~ complete;original_location=join(739235..739355%2C739491..740062);owner=coffea | |
| 2466 chr1 manual_curation exon 3920040 3920160 . + . Parent=GSCOCT00019304001 | |
| 2467 chr1 manual_curation exon 3920296 3920867 . + . Parent=GSCOCT00019304001 | |
| 2468 chr1 manual_curation CDS 3920040 3920160 . + 0 Parent=GSCOCT00019304001 | |
| 2469 chr1 manual_curation CDS 3920296 3920867 . + 1 Parent=GSCOCT00019304001 | |
| 2470 chr1 manual_curation gene 3922584 3926397 . + . ID=GSCOCG00019305001;Name=Cc01_g02120 | |
| 2471 chr1 manual_curation mRNA 3922584 3926397 . + . ID=GSCOCT00019305001;Parent=GSCOCG00019305001;Name=Cc01_g02120 | |
| 2472 chr1 manual_curation polypeptide 3923417 3925383 . + . ID=GSCOCP00019305001;Dbxref=InterPro:IPR018609,PFAM:PF09736,SwissProt:Q4QQU1,SwissProt:Q8R149,SwissProt:Q9BRD0,TAIR:AT1G31870.1,TrEMBL:B9N2S3,TrEMBL:B9T3X4,TrEMBL:I1KIA7;Derives_from=GSCOCT00019305001;Name=Cc01_g02120;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative BUD13 homolog,CC_functional_completeness:complete,CC_gene:Bud13,CC_gene:BUD13;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019305001~ Putative BUD13 homolog~ Bud13~ complete;original_location=join(742612..742804%2C742895..744340%2C744493..744578);owner=coffea | |
| 2473 chr1 manual_curation exon 3922584 3923609 . + . Parent=GSCOCT00019305001 | |
| 2474 chr1 manual_curation exon 3923700 3925145 . + . Parent=GSCOCT00019305001 | |
| 2475 chr1 manual_curation exon 3925298 3926397 . + . Parent=GSCOCT00019305001 | |
| 2476 chr1 manual_curation CDS 3923417 3923609 . + 0 Parent=GSCOCT00019305001 | |
| 2477 chr1 manual_curation CDS 3923700 3925145 . + 1 Parent=GSCOCT00019305001 | |
| 2478 chr1 manual_curation CDS 3925298 3925383 . + 1 Parent=GSCOCT00019305001 | |
| 2479 chr1 manual_curation gene 3930566 3937666 . + . ID=GSCOCG00019307001;Name=Cc01_g02130 | |
| 2480 chr1 manual_curation mRNA 3930566 3937666 . + . ID=GSCOCT00019307001;Parent=GSCOCG00019307001;Name=Cc01_g02130 | |
| 2481 chr1 manual_curation polypeptide 3930835 3937159 . + . ID=GSCOCP00019307001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR005097,InterPro:IPR016040,PFAM:PF03435,TAIR:AT1G50450.1,TrEMBL:B9HP02,TrEMBL:D7SNG1,TrEMBL:F1JTK3;Derives_from=GSCOCT00019307001;Name=Cc01_g02130;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,CC_EC_number:missing_EC_number,PRODUCT:Saccharopine dehydrogenase,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019307001~ Saccharopine dehydrogenase~ unknown_gene~ complete;original_location=join(750030..750289%2C750407..750504%2C751406..751488%2C751635..751761%2C752285..752348%2C753096..753193%2C753288..753372%2C754223..754346%2C754908..755009%2C755132..755196%2C755969..756050%2C756133..756212%2C756297..756354);owner=coffea | |
| 2482 chr1 manual_curation exon 3930566 3931094 . + . Parent=GSCOCT00019307001 | |
| 2483 chr1 manual_curation exon 3931212 3931309 . + . Parent=GSCOCT00019307001 | |
| 2484 chr1 manual_curation exon 3932211 3932293 . + . Parent=GSCOCT00019307001 | |
| 2485 chr1 manual_curation exon 3932440 3932566 . + . Parent=GSCOCT00019307001 | |
| 2486 chr1 manual_curation exon 3933090 3933153 . + . Parent=GSCOCT00019307001 | |
| 2487 chr1 manual_curation exon 3933901 3933998 . + . Parent=GSCOCT00019307001 | |
| 2488 chr1 manual_curation exon 3934093 3934177 . + . Parent=GSCOCT00019307001 | |
| 2489 chr1 manual_curation exon 3935028 3935151 . + . Parent=GSCOCT00019307001 | |
| 2490 chr1 manual_curation exon 3935713 3935814 . + . Parent=GSCOCT00019307001 | |
| 2491 chr1 manual_curation exon 3935937 3936001 . + . Parent=GSCOCT00019307001 | |
| 2492 chr1 manual_curation exon 3936774 3936855 . + . Parent=GSCOCT00019307001 | |
| 2493 chr1 manual_curation exon 3936938 3937017 . + . Parent=GSCOCT00019307001 | |
| 2494 chr1 manual_curation exon 3937102 3937666 . + . Parent=GSCOCT00019307001 | |
| 2495 chr1 manual_curation CDS 3930835 3931094 . + 0 Parent=GSCOCT00019307001 | |
| 2496 chr1 manual_curation CDS 3931212 3931309 . + 2 Parent=GSCOCT00019307001 | |
| 2497 chr1 manual_curation CDS 3932211 3932293 . + 1 Parent=GSCOCT00019307001 | |
| 2498 chr1 manual_curation CDS 3932440 3932566 . + 0 Parent=GSCOCT00019307001 | |
| 2499 chr1 manual_curation CDS 3933090 3933153 . + 1 Parent=GSCOCT00019307001 | |
| 2500 chr1 manual_curation CDS 3933901 3933998 . + 2 Parent=GSCOCT00019307001 | |
| 2501 chr1 manual_curation CDS 3934093 3934177 . + 1 Parent=GSCOCT00019307001 | |
| 2502 chr1 manual_curation CDS 3935028 3935151 . + 2 Parent=GSCOCT00019307001 | |
| 2503 chr1 manual_curation CDS 3935713 3935814 . + 0 Parent=GSCOCT00019307001 | |
| 2504 chr1 manual_curation CDS 3935937 3936001 . + 0 Parent=GSCOCT00019307001 | |
| 2505 chr1 manual_curation CDS 3936774 3936855 . + 2 Parent=GSCOCT00019307001 | |
| 2506 chr1 manual_curation CDS 3936938 3937017 . + 0 Parent=GSCOCT00019307001 | |
| 2507 chr1 manual_curation CDS 3937102 3937159 . + 2 Parent=GSCOCT00019307001 | |
| 2508 chr1 manual_curation gene 3938448 3945218 . - . ID=GSCOCG00019308001;Name=Cc01_g02140 | |
| 2509 chr1 manual_curation mRNA 3938448 3945218 . - . ID=GSCOCT00019308001;Parent=GSCOCG00019308001;Name=Cc01_g02140 | |
| 2510 chr1 manual_curation polypeptide 3938655 3942794 . - . ID=GSCOCP00019308001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR000490,InterPro:IPR012946,InterPro:IPR013781,InterPro:IPR017853,PFAM:PF00332,PFAM:PF07983,SMART:SM00768,SUPERFAMILY:SSF51445,SwissProt:Q94CD8,SwissProt:Q9C7U5,SwissProt:Q9ZU91,TAIR:AT1G66250.1,TAIR:AT2G01630.1,TAIR:AT3G13560.1,TrEMBL:A5B7F8,TrEMBL:I1KSB7,TrEMBL:I1MWK5;Derives_from=GSCOCT00019308001;Name=Cc01_g02140;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0043169,CC_EC_number:3.2.1.39,PRODUCT:Glucan endo-1%2C3-beta-glucosidase 4,CC_functional_completeness:complete,CC_gene:At3g13560,CC_gene:At2g01630,CC_gene:At1g66250;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019308001~ Glucan endo-1%2C3-beta-glucosidase 4~ At3g13560~ complete;original_location=complement(join(761914..761989%2C759010..760257%2C758155..758182%2C757850..758009));owner=coffea | |
| 2511 chr1 manual_curation exon 3944983 3945218 . - . Parent=GSCOCT00019308001 | |
| 2512 chr1 manual_curation exon 3938448 3938814 . - . Parent=GSCOCT00019308001 | |
| 2513 chr1 manual_curation exon 3938960 3938987 . - . Parent=GSCOCT00019308001 | |
| 2514 chr1 manual_curation exon 3939815 3941062 . - . Parent=GSCOCT00019308001 | |
| 2515 chr1 manual_curation exon 3942719 3942844 . - . Parent=GSCOCT00019308001 | |
| 2516 chr1 manual_curation CDS 3938655 3938814 . - 2 Parent=GSCOCT00019308001 | |
| 2517 chr1 manual_curation CDS 3938960 3938987 . - 1 Parent=GSCOCT00019308001 | |
| 2518 chr1 manual_curation CDS 3939815 3941062 . - 1 Parent=GSCOCT00019308001 | |
| 2519 chr1 manual_curation CDS 3942719 3942794 . - 0 Parent=GSCOCT00019308001 | |
| 2520 chr1 manual_curation gene 3948493 3952884 . - . ID=GSCOCG00019309001;Name=Cc01_g02150 | |
| 2521 chr1 manual_curation mRNA 3948493 3952884 . - . ID=GSCOCT00019309001;Parent=GSCOCG00019309001;Name=Cc01_g02150 | |
| 2522 chr1 manual_curation polypeptide 3948814 3951611 . - . ID=GSCOCP00019309001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR012677,PFAM:PF00076,PROFILE:PS50102,SMART:SM00360,SwissProt:O75494,SwissProt:Q8WXF0,SwissProt:Q9R0U0,TAIR:AT1G55310.3,TAIR:AT3G13570.1,TAIR:AT5G18810.1,TrEMBL:F6GUK3,TrEMBL:Q9FYA8,TrEMBL:Q9LHP2;Derives_from=GSCOCT00019309001;Name=Cc01_g02150;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,CC_EC_number:missing_EC_number,PRODUCT:SC35-like splicing factor 30A,CC_functional_completeness:complete,CC_gene:SRSF12,CC_gene:Srsf10,CC_gene:SRSF10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019309001~ SC35-like splicing factor 30A~ SRSF12~ complete;original_location=complement(join(770664..770806%2C770439..770516%2C769433..769600%2C768605..768751%2C768009..768285));owner=coffea | |
| 2523 chr1 manual_curation exon 3948493 3949090 . - . Parent=GSCOCT00019309001 | |
| 2524 chr1 manual_curation exon 3949410 3949556 . - . Parent=GSCOCT00019309001 | |
| 2525 chr1 manual_curation exon 3950238 3950405 . - . Parent=GSCOCT00019309001 | |
| 2526 chr1 manual_curation exon 3951244 3951321 . - . Parent=GSCOCT00019309001 | |
| 2527 chr1 manual_curation exon 3951469 3952884 . - . Parent=GSCOCT00019309001 | |
| 2528 chr1 manual_curation CDS 3948814 3949090 . - 2 Parent=GSCOCT00019309001 | |
| 2529 chr1 manual_curation CDS 3949410 3949556 . - 2 Parent=GSCOCT00019309001 | |
| 2530 chr1 manual_curation CDS 3950238 3950405 . - 2 Parent=GSCOCT00019309001 | |
| 2531 chr1 manual_curation CDS 3951244 3951321 . - 2 Parent=GSCOCT00019309001 | |
| 2532 chr1 manual_curation CDS 3951469 3951611 . - 0 Parent=GSCOCT00019309001 | |
| 2533 chr1 manual_curation gene 3966761 3967591 . - . ID=GSCOCG00019311001;Name=Cc01_g02160 | |
| 2534 chr1 manual_curation mRNA 3966761 3967591 . - . ID=GSCOCT00019311001;Parent=GSCOCG00019311001;Name=Cc01_g02160 | |
| 2535 chr1 manual_curation polypeptide 3966761 3967591 . - . ID=GSCOCP00019311001;Dbxref=InterPro:IPR000873,PFAM:PF00501,SwissProt:F4HUK6,SwissProt:Q8VZF1,SwissProt:Q9SEY5,TAIR:AT1G20560.1,TAIR:AT2G17650.1,TAIR:AT3G16910.1,TrEMBL:B9H5H2,TrEMBL:B9R8M5,TrEMBL:F6I6S6;Derives_from=GSCOCT00019311001;Name=Cc01_g02160;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,CC_EC_number:6.2.1.26,PRODUCT:Probable acyl-activating enzyme 1%2C peroxisomal,CC_functional_completeness:fragment,CC_gene:AAE1,CC_gene:AAE2,CC_gene:AAE7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019311001~ Probable acyl-activating enzyme 1%2C peroxisomal~ AAE1~ fragment;original_location=complement(785956..786786);owner=coffea | |
| 2536 chr1 manual_curation exon 3966761 3967591 . - . Parent=GSCOCT00019311001 | |
| 2537 chr1 manual_curation CDS 3966761 3967591 . - 0 Parent=GSCOCT00019311001 | |
| 2538 chr1 manual_curation gene 3970226 3970594 . - . ID=GSCOCG00019312001;Name=Cc01_g02170 | |
| 2539 chr1 manual_curation mRNA 3970226 3970594 . - . ID=GSCOCT00019312001;Parent=GSCOCG00019312001;Name=Cc01_g02170 | |
| 2540 chr1 manual_curation polypeptide 3970226 3970594 . - . ID=GSCOCP00019312001;Dbxref=SwissProt:F4HUK6,SwissProt:Q9SEY5,SwissProt:Q9SFW5,TAIR:AT1G20560.1,TAIR:AT1G76290.1,TAIR:AT2G17650.1,TrEMBL:B9H5H2,TrEMBL:B9PFE0,TrEMBL:D7KTB9;Derives_from=GSCOCT00019312001;Name=Cc01_g02170;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Predicted protein,CC_functional_completeness:modules,CC_gene:AEE21,CC_gene:AAE1,CC_gene:AAE2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019312001~ Predicted protein~ AEE21~ modules;original_location=complement(789421..789789);owner=coffea | |
| 2541 chr1 manual_curation exon 3970226 3970594 . - . Parent=GSCOCT00019312001 | |
| 2542 chr1 manual_curation CDS 3970226 3970594 . - 0 Parent=GSCOCT00019312001 | |
| 2543 chr1 manual_curation gene 3972179 3974764 . - . ID=GSCOCG00019313001;Name=Cc01_g02180 | |
| 2544 chr1 manual_curation mRNA 3972179 3974764 . - . ID=GSCOCT00019313001;Parent=GSCOCG00019313001;Name=Cc01_g02180 | |
| 2545 chr1 manual_curation polypeptide 3972179 3974764 . - . ID=GSCOCP00019313001;Dbxref=InterPro:IPR005299,PFAM:PF03492,SwissProt:A4GE69,SwissProt:Q9AVK0,SwissProt:Q9AVK1,TAIR:AT3G11480.1,TAIR:AT4G36470.1,TAIR:AT5G38020.1,TrEMBL:E5Q8J7,TrEMBL:Q8RVL8,TrEMBL:Q8RVL9;Derives_from=GSCOCT00019313001;Name=Cc01_g02180;Ontology_term=CC_evidence_code:ISS,GO:0008168,CC_EC_number:2.1.1.141,PRODUCT:Putative 7-methylxanthosine synthase 1,CC_functional_completeness:complete,CC_gene:XMT1,CC_gene:CS3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019313001~ Putative 7-methylxanthosine synthase 1~ XMT1~ complete;original_location=complement(join(793885..793959%2C793569..793781%2C793361..793486%2C792817..792897%2C792651..792675%2C791869..791897%2C791542..791731%2C791374..791483));owner=coffea | |
| 2546 chr1 manual_curation exon 3972179 3972288 . - . Parent=GSCOCT00019313001 | |
| 2547 chr1 manual_curation exon 3972347 3972536 . - . Parent=GSCOCT00019313001 | |
| 2548 chr1 manual_curation exon 3972674 3972702 . - . Parent=GSCOCT00019313001 | |
| 2549 chr1 manual_curation exon 3973456 3973480 . - . Parent=GSCOCT00019313001 | |
| 2550 chr1 manual_curation exon 3973622 3973702 . - . Parent=GSCOCT00019313001 | |
| 2551 chr1 manual_curation exon 3974166 3974291 . - . Parent=GSCOCT00019313001 | |
| 2552 chr1 manual_curation exon 3974374 3974586 . - . Parent=GSCOCT00019313001 | |
| 2553 chr1 manual_curation exon 3974690 3974764 . - . Parent=GSCOCT00019313001 | |
| 2554 chr1 manual_curation CDS 3972179 3972288 . - 1 Parent=GSCOCT00019313001 | |
| 2555 chr1 manual_curation CDS 3972347 3972536 . - 0 Parent=GSCOCT00019313001 | |
| 2556 chr1 manual_curation CDS 3972674 3972702 . - 1 Parent=GSCOCT00019313001 | |
| 2557 chr1 manual_curation CDS 3973456 3973480 . - 0 Parent=GSCOCT00019313001 | |
| 2558 chr1 manual_curation CDS 3973622 3973702 . - 0 Parent=GSCOCT00019313001 | |
| 2559 chr1 manual_curation CDS 3974166 3974291 . - 0 Parent=GSCOCT00019313001 | |
| 2560 chr1 manual_curation CDS 3974374 3974586 . - 0 Parent=GSCOCT00019313001 | |
| 2561 chr1 manual_curation CDS 3974690 3974764 . - 0 Parent=GSCOCT00019313001 | |
| 2562 chr1 manual_curation gene 3982633 3983466 . + . ID=GSCOCG00019314001;Name=Cc01_g02190 | |
| 2563 chr1 manual_curation mRNA 3982633 3983466 . + . ID=GSCOCT00019314001;Parent=GSCOCG00019314001;Name=Cc01_g02190 | |
| 2564 chr1 manual_curation polypeptide 3982633 3983466 . + . ID=GSCOCP00019314001;Dbxref=InterPro:IPR010339,PFAM:PF06068,TAIR:AT5G22330.1,TrEMBL:I1Q8I5,TrEMBL:Q5QMH1,TrEMBL:Q6ZLD7;Derives_from=GSCOCT00019314001;Name=Cc01_g02190;Ontology_term=CC_evidence_code:ISS,GO:0003678,GO:0005524,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019314001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(801828..801946%2C802520..802661);owner=coffea | |
| 2565 chr1 manual_curation exon 3982633 3982751 . + . Parent=GSCOCT00019314001 | |
| 2566 chr1 manual_curation exon 3983325 3983466 . + . Parent=GSCOCT00019314001 | |
| 2567 chr1 manual_curation CDS 3982633 3982751 . + 0 Parent=GSCOCT00019314001 | |
| 2568 chr1 manual_curation CDS 3983325 3983466 . + 2 Parent=GSCOCT00019314001 | |
| 2569 chr1 manual_curation gene 4098311 4100735 . - . ID=GSCOCG00019316001;Name=Cc01_g02200 | |
| 2570 chr1 manual_curation mRNA 4098311 4100735 . - . ID=GSCOCT00019316001;Parent=GSCOCG00019316001;Name=Cc01_g02200 | |
| 2571 chr1 manual_curation polypeptide 4098311 4100735 . - . ID=GSCOCP00019316001;Derives_from=GSCOCT00019316001;Name=Cc01_g02200;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019316001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(919813..919930%2C917506..917651));owner=coffea | |
| 2572 chr1 manual_curation exon 4098311 4098456 . - . Parent=GSCOCT00019316001 | |
| 2573 chr1 manual_curation exon 4100618 4100735 . - . Parent=GSCOCT00019316001 | |
| 2574 chr1 manual_curation CDS 4098311 4098456 . - 1 Parent=GSCOCT00019316001 | |
| 2575 chr1 manual_curation CDS 4100618 4100735 . - 0 Parent=GSCOCT00019316001 | |
| 2576 chr1 manual_curation gene 4114701 4115398 . - . ID=GSCOCG00019317001;Name=Cc01_g02210 | |
| 2577 chr1 manual_curation mRNA 4114701 4115398 . - . ID=GSCOCT00019317001;Parent=GSCOCG00019317001;Name=Cc01_g02210 | |
| 2578 chr1 manual_curation polypeptide 4114701 4115398 . - . ID=GSCOCP00019317001;Dbxref=InterPro:IPR005299,PFAM:PF03492,SwissProt:Q8H0D2,SwissProt:Q8H0G0,SwissProt:Q9AVK1,TAIR:AT3G21950.1,TAIR:AT4G36470.1,TAIR:AT5G38020.1,TrEMBL:G9BZJ6,TrEMBL:G9BZJ7,TrEMBL:Q6US91;Derives_from=GSCOCT00019317001;Name=Cc01_g02210;Ontology_term=CC_evidence_code:ISS,GO:0008168,CC_EC_number:2.1.1.141,PRODUCT:Probable caffeine synthase 3,CC_functional_completeness:fragment,CC_gene:CS3,CC_gene:DXMT1,CC_gene:CTS2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019317001~ Probable caffeine synthase 3~ CS3~ fragment;original_location=complement(join(934519..934593%2C934145..934415%2C933896..934107));owner=coffea | |
| 2579 chr1 manual_curation exon 4114701 4114912 . - . Parent=GSCOCT00019317001 | |
| 2580 chr1 manual_curation exon 4114950 4115220 . - . Parent=GSCOCT00019317001 | |
| 2581 chr1 manual_curation exon 4115324 4115398 . - . Parent=GSCOCT00019317001 | |
| 2582 chr1 manual_curation CDS 4114701 4114912 . - 1 Parent=GSCOCT00019317001 | |
| 2583 chr1 manual_curation CDS 4114950 4115220 . - 0 Parent=GSCOCT00019317001 | |
| 2584 chr1 manual_curation CDS 4115324 4115398 . - 0 Parent=GSCOCT00019317001 | |
| 2585 chr1 manual_curation gene 4127359 4127935 . - . ID=GSCOCG00019318001;Name=Cc01_g02220 | |
| 2586 chr1 manual_curation mRNA 4127359 4127935 . - . ID=GSCOCT00019318001;Parent=GSCOCG00019318001;Name=Cc01_g02220 | |
| 2587 chr1 manual_curation polypeptide 4127359 4127935 . - . ID=GSCOCP00019318001;Dbxref=InterPro:IPR005299,PFAM:PF03492,SwissProt:A4GE69,SwissProt:Q9AVJ9,SwissProt:Q9AVK0,TAIR:AT1G19640.1,TAIR:AT3G11480.1,TAIR:AT5G04370.2,TrEMBL:D7TD75,TrEMBL:F6HHQ1,TrEMBL:I1JLY0;Derives_from=GSCOCT00019318001;Name=Cc01_g02220;Ontology_term=CC_evidence_code:ISS,GO:0008168,CC_EC_number:2.1.1.141,PRODUCT:Putative Monomethylxanthine methyltransferase 1,CC_functional_completeness:fragment,CC_gene:MXMT1,CC_gene:XMT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019318001~ Putative Monomethylxanthine methyltransferase 1~ MXMT1~ fragment;original_location=complement(join(947020..947130%2C946554..946925));owner=coffea | |
| 2588 chr1 manual_curation exon 4127359 4127730 . - . Parent=GSCOCT00019318001 | |
| 2589 chr1 manual_curation exon 4127825 4127935 . - . Parent=GSCOCT00019318001 | |
| 2590 chr1 manual_curation CDS 4127359 4127730 . - 0 Parent=GSCOCT00019318001 | |
| 2591 chr1 manual_curation CDS 4127825 4127935 . - 0 Parent=GSCOCT00019318001 | |
| 2592 chr1 manual_curation gene 4128009 4129449 . - . ID=GSCOCG00019319001;Name=Cc01_g02230 | |
| 2593 chr1 manual_curation mRNA 4128009 4129449 . - . ID=GSCOCT00019319001;Parent=GSCOCG00019319001;Name=Cc01_g02230 | |
| 2594 chr1 manual_curation polypeptide 4128009 4129449 . - . ID=GSCOCP00019319001;Dbxref=InterPro:IPR005299,PFAM:PF03492,SwissProt:Q8H0G0,SwissProt:Q9AVK1,SwissProt:Q9AVL9,TAIR:AT3G21950.1,TAIR:AT4G36470.1,TAIR:AT5G38020.1,TrEMBL:G9BZJ6,TrEMBL:Q6US91,TrEMBL:Q8RVM1;Derives_from=GSCOCT00019319001;Name=Cc01_g02230;Ontology_term=CC_evidence_code:ISS,GO:0008168,CC_EC_number:2.1.1.141,PRODUCT:Probable caffeine synthase 3,CC_functional_completeness:fragment,CC_gene:CS3,CC_gene:CS4,CC_gene:CTS2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019319001~ Probable caffeine synthase 3~ CS3~ fragment;original_location=complement(join(948570..948644%2C948020..948439%2C947204..947287));owner=coffea | |
| 2595 chr1 manual_curation exon 4128009 4128092 . - . Parent=GSCOCT00019319001 | |
| 2596 chr1 manual_curation exon 4128825 4129244 . - . Parent=GSCOCT00019319001 | |
| 2597 chr1 manual_curation exon 4129375 4129449 . - . Parent=GSCOCT00019319001 | |
| 2598 chr1 manual_curation CDS 4128009 4128092 . - 0 Parent=GSCOCT00019319001 | |
| 2599 chr1 manual_curation CDS 4128825 4129244 . - 0 Parent=GSCOCT00019319001 | |
| 2600 chr1 manual_curation CDS 4129375 4129449 . - 0 Parent=GSCOCT00019319001 | |
| 2601 chr1 manual_curation gene 4133724 4135236 . + . ID=GSCOCG00019320001;Name=Cc01_g02240 | |
| 2602 chr1 manual_curation mRNA 4133724 4135236 . + . ID=GSCOCT00019320001;Parent=GSCOCG00019320001;Name=Cc01_g02240 | |
| 2603 chr1 manual_curation polypeptide 4134018 4135236 . + . ID=GSCOCP00019320001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q7XA40,SwissProt:Q7XA42,SwissProt:Q7XBQ9,TAIR:AT1G58390.1,TAIR:AT3G14470.1,TAIR:AT3G50950.2,TrEMBL:Q2TSY4,TrEMBL:Q2TSY8,TrEMBL:Q2TSZ4;Derives_from=GSCOCT00019320001;Name=Cc01_g02240;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance protein RGA3,CC_functional_completeness:fragment,CC_gene:RGA3,CC_gene:RGA1,CC_gene:RGA2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019320001~ Putative disease resistance protein RGA3~ RGA3~ fragment;original_location=join(953213..953854%2C954372..954431);owner=coffea | |
| 2604 chr1 manual_curation exon 4133724 4134659 . + . Parent=GSCOCT00019320001 | |
| 2605 chr1 manual_curation exon 4135177 4135236 . + . Parent=GSCOCT00019320001 | |
| 2606 chr1 manual_curation CDS 4134018 4134659 . + 0 Parent=GSCOCT00019320001 | |
| 2607 chr1 manual_curation CDS 4135177 4135236 . + 0 Parent=GSCOCT00019320001 | |
| 2608 chr1 manual_curation gene 4135536 4139764 . + . ID=GSCOCG00019321001;Name=Cc01_g02250 | |
| 2609 chr1 manual_curation mRNA 4135536 4139764 . + . ID=GSCOCT00019321001;Parent=GSCOCG00019321001;Name=Cc01_g02250 | |
| 2610 chr1 manual_curation polypeptide 4135536 4137378 . + . ID=GSCOCP00019321001;Dbxref=SwissProt:Q7XA39,SwissProt:Q7XA40,SwissProt:Q7XA42,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TrEMBL:B9GV38,TrEMBL:B9NFN7,TrEMBL:B9RSM1;Derives_from=GSCOCT00019321001;Name=Cc01_g02250;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance protein RGA4,CC_functional_completeness:fragment,CC_gene:RGA4,CC_gene:RGA3,CC_gene:RGA1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019321001~ Putative disease resistance protein RGA4~ RGA4~ fragment;original_location=join(954731..955028%2C955092..955380%2C955645..956013%2C956546..956573);owner=coffea | |
| 2611 chr1 manual_curation exon 4137940 4138125 . + . Parent=GSCOCT00019321001 | |
| 2612 chr1 manual_curation exon 4138248 4138695 . + . Parent=GSCOCT00019321001 | |
| 2613 chr1 manual_curation exon 4139697 4139764 . + . Parent=GSCOCT00019321001 | |
| 2614 chr1 manual_curation exon 4135536 4135833 . + . Parent=GSCOCT00019321001 | |
| 2615 chr1 manual_curation exon 4135897 4136185 . + . Parent=GSCOCT00019321001 | |
| 2616 chr1 manual_curation exon 4136450 4136818 . + . Parent=GSCOCT00019321001 | |
| 2617 chr1 manual_curation exon 4137351 4137655 . + . Parent=GSCOCT00019321001 | |
| 2618 chr1 manual_curation CDS 4135536 4135833 . + 0 Parent=GSCOCT00019321001 | |
| 2619 chr1 manual_curation CDS 4135897 4136185 . + 1 Parent=GSCOCT00019321001 | |
| 2620 chr1 manual_curation CDS 4136450 4136818 . + 2 Parent=GSCOCT00019321001 | |
| 2621 chr1 manual_curation CDS 4137351 4137378 . + 2 Parent=GSCOCT00019321001 | |
| 2622 chr1 manual_curation gene 4142619 4143324 . - . ID=GSCOCG00019323001;Name=Cc01_g02260 | |
| 2623 chr1 manual_curation mRNA 4142619 4143324 . - . ID=GSCOCT00019323001;Parent=GSCOCG00019323001;Name=Cc01_g02260 | |
| 2624 chr1 manual_curation polypeptide 4142619 4143324 . - . ID=GSCOCP00019323001;Dbxref=InterPro:IPR005299,PFAM:PF03492,SwissProt:Q68CM3,SwissProt:Q9AVL9,SwissProt:Q9FZN8,TAIR:AT3G11480.1,TAIR:AT5G04370.2,TAIR:AT5G66430.1,TrEMBL:B6ZH70,TrEMBL:B9T7V8,TrEMBL:D7TD75;Derives_from=GSCOCT00019323001;Name=Cc01_g02260;Ontology_term=CC_evidence_code:ISS,GO:0008168,CC_EC_number:2.1.1.141,PRODUCT:Caffeine synthase 1,CC_functional_completeness:fragment,CC_gene:TCS1,CC_gene:TCS2,CC_gene:CS4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019323001~ Caffeine synthase 1~ TCS1~ fragment;original_location=complement(join(962475..962519%2C961814..961975));owner=coffea | |
| 2625 chr1 manual_curation exon 4142619 4142780 . - . Parent=GSCOCT00019323001 | |
| 2626 chr1 manual_curation exon 4143280 4143324 . - . Parent=GSCOCT00019323001 | |
| 2627 chr1 manual_curation CDS 4142619 4142780 . - 0 Parent=GSCOCT00019323001 | |
| 2628 chr1 manual_curation CDS 4143280 4143324 . - 0 Parent=GSCOCT00019323001 | |
| 2629 chr1 manual_curation gene 4143418 4143858 . - . ID=GSCOCG00019324001;Name=Cc01_g02270 | |
| 2630 chr1 manual_curation mRNA 4143418 4143858 . - . ID=GSCOCT00019324001;Parent=GSCOCG00019324001;Name=Cc01_g02270 | |
| 2631 chr1 manual_curation polypeptide 4143418 4143858 . - . ID=GSCOCP00019324001;Dbxref=InterPro:IPR005299,PFAM:PF03492,SwissProt:A4GE69,SwissProt:Q9AVK0,SwissProt:Q9AVL9,TAIR:AT1G19640.1,TAIR:AT2G14060.1,TAIR:AT3G21950.1,TrEMBL:E5Q8J7,TrEMBL:G9BZJ7,TrEMBL:Q8RVL9;Derives_from=GSCOCT00019324001;Name=Cc01_g02270;Ontology_term=CC_evidence_code:ISS,GO:0008168,CC_EC_number:2.1.1.141,PRODUCT:Probable caffeine synthase 4,CC_functional_completeness:fragment,CC_gene:CS4,CC_gene:XMT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019324001~ Probable caffeine synthase 4~ CS4~ fragment;original_location=complement(join(962985..963053%2C962613..962888));owner=coffea | |
| 2632 chr1 manual_curation exon 4143418 4143693 . - . Parent=GSCOCT00019324001 | |
| 2633 chr1 manual_curation exon 4143790 4143858 . - . Parent=GSCOCT00019324001 | |
| 2634 chr1 manual_curation CDS 4143418 4143693 . - 0 Parent=GSCOCT00019324001 | |
| 2635 chr1 manual_curation CDS 4143790 4143858 . - 0 Parent=GSCOCT00019324001 | |
| 2636 chr1 manual_curation gene 4145815 4157657 . + . ID=GSCOCG00019326001;Name=Cc01_g02280 | |
| 2637 chr1 manual_curation mRNA 4145815 4157657 . + . ID=GSCOCT00019326001;Parent=GSCOCG00019326001;Name=Cc01_g02280 | |
| 2638 chr1 manual_curation polypeptide 4145815 4157657 . + . ID=GSCOCP00019326001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q7XA40,SwissProt:Q7XA42,SwissProt:Q7XBQ9,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TAIR:AT3G46710.1,TrEMBL:B9GZ62,TrEMBL:B9NBB7,TrEMBL:Q19PN6;Derives_from=GSCOCT00019326001;Name=Cc01_g02280;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance protein RGA3,CC_functional_completeness:modules,CC_gene:RGA3,CC_gene:RGA2,CC_gene:RGA1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019326001~ Putative disease resistance protein RGA3~ RGA3~ modules;original_location=join(965010..965327%2C966806..966903%2C966991..967049%2C972299..974788%2C974935..975132%2C975538..975687%2C976016..976125%2C976802..976852);owner=coffea | |
| 2639 chr1 manual_curation exon 4145815 4146132 . + . Parent=GSCOCT00019326001 | |
| 2640 chr1 manual_curation exon 4147611 4147708 . + . Parent=GSCOCT00019326001 | |
| 2641 chr1 manual_curation exon 4147796 4147854 . + . Parent=GSCOCT00019326001 | |
| 2642 chr1 manual_curation exon 4153104 4155593 . + . Parent=GSCOCT00019326001 | |
| 2643 chr1 manual_curation exon 4155740 4155937 . + . Parent=GSCOCT00019326001 | |
| 2644 chr1 manual_curation exon 4156343 4156492 . + . Parent=GSCOCT00019326001 | |
| 2645 chr1 manual_curation exon 4156821 4156930 . + . Parent=GSCOCT00019326001 | |
| 2646 chr1 manual_curation exon 4157607 4157657 . + . Parent=GSCOCT00019326001 | |
| 2647 chr1 manual_curation CDS 4145815 4146132 . + 0 Parent=GSCOCT00019326001 | |
| 2648 chr1 manual_curation CDS 4147611 4147708 . + 0 Parent=GSCOCT00019326001 | |
| 2649 chr1 manual_curation CDS 4147796 4147854 . + 2 Parent=GSCOCT00019326001 | |
| 2650 chr1 manual_curation CDS 4153104 4155593 . + 1 Parent=GSCOCT00019326001 | |
| 2651 chr1 manual_curation CDS 4155740 4155937 . + 1 Parent=GSCOCT00019326001 | |
| 2652 chr1 manual_curation CDS 4156343 4156492 . + 1 Parent=GSCOCT00019326001 | |
| 2653 chr1 manual_curation CDS 4156821 4156930 . + 1 Parent=GSCOCT00019326001 | |
| 2654 chr1 manual_curation CDS 4157607 4157657 . + 0 Parent=GSCOCT00019326001 | |
| 2655 chr1 manual_curation gene 4157787 4158403 . + . ID=GSCOCG00019327001;Name=Cc01_g02290 | |
| 2656 chr1 manual_curation mRNA 4157787 4158403 . + . ID=GSCOCT00019327001;Parent=GSCOCG00019327001;Name=Cc01_g02290 | |
| 2657 chr1 manual_curation polypeptide 4157787 4158365 . + . ID=GSCOCP00019327001;Derives_from=GSCOCT00019327001;Name=Cc01_g02290;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019327001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(976982..977046%2C977272..977395%2C977531..977560);owner=coffea | |
| 2658 chr1 manual_curation exon 4157787 4157851 . + . Parent=GSCOCT00019327001 | |
| 2659 chr1 manual_curation exon 4158077 4158200 . + . Parent=GSCOCT00019327001 | |
| 2660 chr1 manual_curation exon 4158336 4158403 . + . Parent=GSCOCT00019327001 | |
| 2661 chr1 manual_curation CDS 4157787 4157851 . + 0 Parent=GSCOCT00019327001 | |
| 2662 chr1 manual_curation CDS 4158077 4158200 . + 2 Parent=GSCOCT00019327001 | |
| 2663 chr1 manual_curation CDS 4158336 4158365 . + 0 Parent=GSCOCT00019327001 | |
| 2664 chr1 manual_curation gene 4161495 4163051 . - . ID=GSCOCG00019329001;Name=Cc01_g02300 | |
| 2665 chr1 manual_curation mRNA 4161495 4163051 . - . ID=GSCOCT00019329001;Parent=GSCOCG00019329001;Name=Cc01_g02300 | |
| 2666 chr1 manual_curation polypeptide 4161495 4163051 . - . ID=GSCOCP00019329001;Dbxref=InterPro:IPR005484,PFAM:PF00861,SwissProt:Q8SAY0,SwissProt:Q9SX68,TAIR:AT1G14205.1,TAIR:AT1G48350.1,TrEMBL:B9S8X7,TrEMBL:F6H952,TrEMBL:G7KFC6;Derives_from=GSCOCT00019329001;Name=Cc01_g02300;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:Ribosomal L18p/L5e family protein,CC_functional_completeness:complete,CC_gene:RPL18;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019329001~ Ribosomal L18p/L5e family protein~ RPL18~ complete;original_location=complement(join(982129..982246%2C981463..981546%2C981079..981344%2C980690..980845));owner=coffea | |
| 2667 chr1 manual_curation exon 4161495 4161650 . - . Parent=GSCOCT00019329001 | |
| 2668 chr1 manual_curation exon 4161884 4162149 . - . Parent=GSCOCT00019329001 | |
| 2669 chr1 manual_curation exon 4162268 4162351 . - . Parent=GSCOCT00019329001 | |
| 2670 chr1 manual_curation exon 4162934 4163051 . - . Parent=GSCOCT00019329001 | |
| 2671 chr1 manual_curation CDS 4161495 4161650 . - 0 Parent=GSCOCT00019329001 | |
| 2672 chr1 manual_curation CDS 4161884 4162149 . - 1 Parent=GSCOCT00019329001 | |
| 2673 chr1 manual_curation CDS 4162268 4162351 . - 1 Parent=GSCOCT00019329001 | |
| 2674 chr1 manual_curation CDS 4162934 4163051 . - 0 Parent=GSCOCT00019329001 | |
| 2675 chr1 manual_curation gene 4236005 4239835 . - . ID=GSCOCG00009725001;Name=Cc01_g02310 | |
| 2676 chr1 manual_curation mRNA 4236005 4239835 . - . ID=GSCOCT00009725001;Parent=GSCOCG00009725001;Name=Cc01_g02310 | |
| 2677 chr1 manual_curation polypeptide 4237418 4239835 . - . ID=GSCOCP00009725001;Dbxref=InterPro:IPR002182,PFAM:PF00931,SwissProt:Q7XA39,SwissProt:Q7XA40,SwissProt:Q7XBQ9,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TAIR:AT3G46730.1,TrEMBL:B9GZ62,TrEMBL:B9N7Z0,TrEMBL:B9NBC0;Derives_from=GSCOCT00009725001;Name=Cc01_g02310;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance protein RGA4,CC_functional_completeness:fragment,CC_gene:RGA4,CC_gene:RGA3,CC_gene:RGA2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009725001~ Putative disease resistance protein RGA4~ RGA4~ fragment;original_location=join(831713..833156%2C833196..833450%2C833850..834130);owner=coffea | |
| 2678 chr1 manual_curation exon 4236509 4236590 . - . Parent=GSCOCT00009725001 | |
| 2679 chr1 manual_curation exon 4236005 4236250 . - . Parent=GSCOCT00009725001 | |
| 2680 chr1 manual_curation exon 4238392 4239835 . - . Parent=GSCOCT00009725001 | |
| 2681 chr1 manual_curation exon 4238098 4238352 . - . Parent=GSCOCT00009725001 | |
| 2682 chr1 manual_curation exon 4237403 4237698 . - . Parent=GSCOCT00009725001 | |
| 2683 chr1 manual_curation CDS 4238392 4239835 . - 0 Parent=GSCOCT00009725001 | |
| 2684 chr1 manual_curation CDS 4238098 4238352 . - 1 Parent=GSCOCT00009725001 | |
| 2685 chr1 manual_curation CDS 4237418 4237698 . - 1 Parent=GSCOCT00009725001 | |
| 2686 chr1 manual_curation gene 4269952 4270788 . + . ID=GSCOCG00009723001;Name=Cc01_g02320 | |
| 2687 chr1 manual_curation mRNA 4269952 4270788 . + . ID=GSCOCT00009723001;Parent=GSCOCG00009723001;Name=Cc01_g02320 | |
| 2688 chr1 manual_curation polypeptide 4269952 4270788 . + . ID=GSCOCP00009723001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q7XA40,SwissProt:Q7XA42,SwissProt:Q7XBQ9,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TAIR:AT3G50950.2,TrEMBL:Q2TSZ3;Derives_from=GSCOCT00009723001;Name=Cc01_g02320;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance protein RGA1,CC_functional_completeness:fragment,CC_gene:RGA1,CC_gene:RGA2,CC_gene:RGA3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009723001~ Putative disease resistance protein RGA1~ RGA1~ fragment;original_location=complement(800760..801596);owner=coffea | |
| 2689 chr1 manual_curation exon 4269952 4270788 . + . Parent=GSCOCT00009723001 | |
| 2690 chr1 manual_curation CDS 4269952 4270788 . + 0 Parent=GSCOCT00009723001 | |
| 2691 chr1 manual_curation gene 4271034 4273738 . + . ID=GSCOCG00009722001;Name=Cc01_g02330 | |
| 2692 chr1 manual_curation mRNA 4271034 4273738 . + . ID=GSCOCT00009722001;Parent=GSCOCG00009722001;Name=Cc01_g02330 | |
| 2693 chr1 manual_curation polypeptide 4271034 4273738 . + . ID=GSCOCP00009722001;Dbxref=SwissProt:Q7XA39,SwissProt:Q7XA40,SwissProt:Q7XBQ9,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TAIR:AT5G44510.1,TrEMBL:B9NBC0,TrEMBL:B9NED8,TrEMBL:B9S468;Derives_from=GSCOCT00009722001;Name=Cc01_g02330;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Cc-nbs-lrr resistance protein,CC_functional_completeness:fragment,CC_gene:RGA2,CC_gene:RGA3,CC_gene:RGA4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009722001~ Putative Cc-nbs-lrr resistance protein~ RGA2~ fragment;original_location=complement(join(798415..800514%2C797810..797854));owner=coffea | |
| 2694 chr1 manual_curation exon 4273694 4273738 . + . Parent=GSCOCT00009722001 | |
| 2695 chr1 manual_curation exon 4271034 4273133 . + . Parent=GSCOCT00009722001 | |
| 2696 chr1 manual_curation CDS 4273694 4273738 . + 0 Parent=GSCOCT00009722001 | |
| 2697 chr1 manual_curation CDS 4271034 4273133 . + 0 Parent=GSCOCT00009722001 | |
| 2698 chr1 manual_curation gene 4273791 4274309 . + . ID=GSCOCG00009721001;Name=Cc01_g02340 | |
| 2699 chr1 manual_curation mRNA 4273791 4274309 . + . ID=GSCOCT00009721001;Parent=GSCOCG00009721001;Name=Cc01_g02340 | |
| 2700 chr1 manual_curation polypeptide 4273791 4274309 . + . ID=GSCOCP00009721001;Derives_from=GSCOCT00009721001;Name=Cc01_g02340;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009721001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(797714..797757%2C797239..797338));owner=coffea | |
| 2701 chr1 manual_curation exon 4274210 4274309 . + . Parent=GSCOCT00009721001 | |
| 2702 chr1 manual_curation exon 4273791 4273834 . + . Parent=GSCOCT00009721001 | |
| 2703 chr1 manual_curation CDS 4274210 4274309 . + 2 Parent=GSCOCT00009721001 | |
| 2704 chr1 manual_curation CDS 4273791 4273834 . + 0 Parent=GSCOCT00009721001 | |
| 2705 chr1 manual_curation gene 4353168 4356659 . + . ID=GSCOCG00009719001;Name=Cc01_g02350 | |
| 2706 chr1 manual_curation mRNA 4353168 4356659 . + . ID=GSCOCT00009719001;Parent=GSCOCG00009719001;Name=Cc01_g02350 | |
| 2707 chr1 manual_curation polypeptide 4353369 4356659 . + . ID=GSCOCP00009719001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q7XA39,SwissProt:Q7XA40,SwissProt:Q7XBQ9,TAIR:AT3G07040.1,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TrEMBL:B9IBB8,TrEMBL:B9NBC0,TrEMBL:B9NED8;Derives_from=GSCOCT00009719001;Name=Cc01_g02350;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance protein RGA3,CC_functional_completeness:complete,CC_gene:RGA3,CC_gene:RGA4,CC_gene:RGA2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009719001~ Putative disease resistance protein RGA3~ RGA3~ complete;original_location=complement(join(718143..718179%2C718028..718087%2C715011..717741%2C714889..714919));owner=coffea | |
| 2708 chr1 manual_curation exon 4356629 4356659 . + . Parent=GSCOCT00009719001 | |
| 2709 chr1 manual_curation exon 4353807 4356537 . + . Parent=GSCOCT00009719001 | |
| 2710 chr1 manual_curation exon 4353461 4353520 . + . Parent=GSCOCT00009719001 | |
| 2711 chr1 manual_curation exon 4353168 4353405 . + . Parent=GSCOCT00009719001 | |
| 2712 chr1 manual_curation CDS 4356629 4356659 . + 2 Parent=GSCOCT00009719001 | |
| 2713 chr1 manual_curation CDS 4353807 4356537 . + 1 Parent=GSCOCT00009719001 | |
| 2714 chr1 manual_curation CDS 4353461 4353520 . + 1 Parent=GSCOCT00009719001 | |
| 2715 chr1 manual_curation CDS 4353369 4353405 . + 0 Parent=GSCOCT00009719001 | |
| 2716 chr1 manual_curation gene 4400785 4402150 . + . ID=GSCOCG00009718001;Name=Cc01_g02360 | |
| 2717 chr1 manual_curation mRNA 4400785 4402150 . + . ID=GSCOCT00009718001;Parent=GSCOCG00009718001;Name=Cc01_g02360 | |
| 2718 chr1 manual_curation polypeptide 4400785 4402150 . + . ID=GSCOCP00009718001;Derives_from=GSCOCT00009718001;Name=Cc01_g02360;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009718001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(670677..670763%2C670529..670627%2C669737..669818%2C669398..669405));owner=coffea | |
| 2719 chr1 manual_curation exon 4402143 4402150 . + . Parent=GSCOCT00009718001 | |
| 2720 chr1 manual_curation exon 4401730 4401811 . + . Parent=GSCOCT00009718001 | |
| 2721 chr1 manual_curation exon 4400921 4401019 . + . Parent=GSCOCT00009718001 | |
| 2722 chr1 manual_curation exon 4400785 4400871 . + . Parent=GSCOCT00009718001 | |
| 2723 chr1 manual_curation CDS 4402143 4402150 . + 1 Parent=GSCOCT00009718001 | |
| 2724 chr1 manual_curation CDS 4401730 4401811 . + 0 Parent=GSCOCT00009718001 | |
| 2725 chr1 manual_curation CDS 4400921 4401019 . + 0 Parent=GSCOCT00009718001 | |
| 2726 chr1 manual_curation CDS 4400785 4400871 . + 0 Parent=GSCOCT00009718001 | |
| 2727 chr1 manual_curation gene 4403816 4404482 . + . ID=GSCOCG00009717001;Name=Cc01_g02370 | |
| 2728 chr1 manual_curation mRNA 4403816 4404482 . + . ID=GSCOCT00009717001;Parent=GSCOCG00009717001;Name=Cc01_g02370 | |
| 2729 chr1 manual_curation polypeptide 4403816 4403905 . + . ID=GSCOCP00009717001;Derives_from=GSCOCT00009717001;Name=Cc01_g02370;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009717001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(667643..667732);owner=coffea | |
| 2730 chr1 manual_curation exon 4403816 4404482 . + . Parent=GSCOCT00009717001 | |
| 2731 chr1 manual_curation CDS 4403816 4403905 . + 0 Parent=GSCOCT00009717001 | |
| 2732 chr1 manual_curation gene 4414562 4420707 . + . ID=GSCOCG00009715001;Name=Cc01_g02380 | |
| 2733 chr1 manual_curation mRNA 4414562 4420707 . + . ID=GSCOCT00009715001;Parent=GSCOCG00009715001;Name=Cc01_g02380 | |
| 2734 chr1 manual_curation polypeptide 4414665 4420465 . + . ID=GSCOCP00009715001;Dbxref=InterPro:IPR001810,InterPro:IPR019494,InterPro:IPR022364,PFAM:PF00646,PFAM:PF10442,SUPERFAMILY:SSF81383,SwissProt:Q9FMV0,TAIR:AT5G63520.1,TrEMBL:A5C7S4,TrEMBL:D7SH00,TrEMBL:I1KC16;Derives_from=GSCOCT00009715001;Name=Cc01_g02380;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative F-box/LRR-repeat protein At5g63520,CC_functional_completeness:complete,CC_gene:At5g63520;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009715001~ Putative F-box/LRR-repeat protein At5g63520~ At5g63520~ complete;original_location=complement(join(656647..656883%2C656456..656563%2C655993..656085%2C655758..655895%2C655034..655129%2C654598..654637%2C653935..654087%2C653154..653335%2C652059..652177%2C651083..651536));owner=coffea | |
| 2735 chr1 manual_curation exon 4420012 4420707 . + . Parent=GSCOCT00009715001 | |
| 2736 chr1 manual_curation exon 4419371 4419489 . + . Parent=GSCOCT00009715001 | |
| 2737 chr1 manual_curation exon 4418213 4418394 . + . Parent=GSCOCT00009715001 | |
| 2738 chr1 manual_curation exon 4417461 4417613 . + . Parent=GSCOCT00009715001 | |
| 2739 chr1 manual_curation exon 4416911 4416950 . + . Parent=GSCOCT00009715001 | |
| 2740 chr1 manual_curation exon 4416419 4416514 . + . Parent=GSCOCT00009715001 | |
| 2741 chr1 manual_curation exon 4415653 4415790 . + . Parent=GSCOCT00009715001 | |
| 2742 chr1 manual_curation exon 4415463 4415555 . + . Parent=GSCOCT00009715001 | |
| 2743 chr1 manual_curation exon 4414985 4415092 . + . Parent=GSCOCT00009715001 | |
| 2744 chr1 manual_curation exon 4414562 4414901 . + . Parent=GSCOCT00009715001 | |
| 2745 chr1 manual_curation CDS 4420012 4420465 . + 2 Parent=GSCOCT00009715001 | |
| 2746 chr1 manual_curation CDS 4419371 4419489 . + 0 Parent=GSCOCT00009715001 | |
| 2747 chr1 manual_curation CDS 4418213 4418394 . + 1 Parent=GSCOCT00009715001 | |
| 2748 chr1 manual_curation CDS 4417461 4417613 . + 1 Parent=GSCOCT00009715001 | |
| 2749 chr1 manual_curation CDS 4416911 4416950 . + 0 Parent=GSCOCT00009715001 | |
| 2750 chr1 manual_curation CDS 4416419 4416514 . + 0 Parent=GSCOCT00009715001 | |
| 2751 chr1 manual_curation CDS 4415653 4415790 . + 0 Parent=GSCOCT00009715001 | |
| 2752 chr1 manual_curation CDS 4415463 4415555 . + 0 Parent=GSCOCT00009715001 | |
| 2753 chr1 manual_curation CDS 4414985 4415092 . + 0 Parent=GSCOCT00009715001 | |
| 2754 chr1 manual_curation CDS 4414665 4414901 . + 0 Parent=GSCOCT00009715001 | |
| 2755 chr1 manual_curation gene 4422916 4425512 . + . ID=GSCOCG00009714001;Name=Cc01_g02390 | |
| 2756 chr1 manual_curation mRNA 4422916 4425512 . + . ID=GSCOCT00009714001;Parent=GSCOCG00009714001;Name=Cc01_g02390 | |
| 2757 chr1 manual_curation polypeptide 4422916 4425512 . + . ID=GSCOCP00009714001;Dbxref=InterPro:IPR005123,PFAM:PF03171,SwissProt:Q43383,SwissProt:Q9LSW6,SwissProt:Q9LTH8,TAIR:AT1G55290.1,TAIR:AT3G12900.1,TAIR:AT3G13610.1,TrEMBL:B9H637,TrEMBL:B9RI27,TrEMBL:D7SZ13;Derives_from=GSCOCT00009714001;Name=Cc01_g02390;Ontology_term=CC_evidence_code:ISS,GO:0016491,CC_EC_number:1.14.11.9,PRODUCT:Putative 1-aminocyclopropane-1-carboxylate oxidase homolog 10,CC_functional_completeness:fragment,CC_gene:At5g43450,CC_gene:2A6,CC_gene:At5g59530;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009714001~ Putative 1-aminocyclopropane-1-carboxylate oxidase homolog 10~ At5g43450~ fragment;original_location=complement(join(648324..648632%2C646036..646275));owner=coffea | |
| 2758 chr1 manual_curation exon 4425273 4425512 . + . Parent=GSCOCT00009714001 | |
| 2759 chr1 manual_curation exon 4422916 4423224 . + . Parent=GSCOCT00009714001 | |
| 2760 chr1 manual_curation CDS 4425273 4425512 . + 0 Parent=GSCOCT00009714001 | |
| 2761 chr1 manual_curation CDS 4422916 4423224 . + 0 Parent=GSCOCT00009714001 | |
| 2762 chr1 manual_curation gene 4428140 4434362 . - . ID=GSCOCG00009713001;Name=Cc01_g02400 | |
| 2763 chr1 manual_curation mRNA 4428140 4434362 . - . ID=GSCOCT00009713001;Parent=GSCOCG00009713001;Name=Cc01_g02400 | |
| 2764 chr1 manual_curation polypeptide 4428563 4434123 . - . ID=GSCOCP00009713001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR000594,InterPro:IPR009036,InterPro:IPR016040,PFAM:PF00899,SUPERFAMILY:SSF69572,SwissProt:P0DI12,SwissProt:P0DI13,SwissProt:Q8VY78,TAIR:AT4G24940.1,TAIR:AT5G50580.2,TAIR:AT5G50680.1,TrEMBL:B9I3U4,TrEMBL:B9RAD1,TrEMBL:D7SGZ8;Derives_from=GSCOCT00009713001;Name=Cc01_g02400;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,CC_EC_number:missing_EC_number,PRODUCT:SUMO-activating enzyme subunit 1A,CC_functional_completeness:complete,CC_gene:SAE1A,CC_gene:SAE1B-2,CC_gene:SAE1B-1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009713001~ SUMO-activating enzyme subunit 1A~ SAE1A~ complete;original_location=join(637425..637507%2C637604..637655%2C638053..638248%2C638641..638720%2C638852..638968%2C639288..639338%2C641816..641882%2C642437..642540%2C642631..642735%2C642824..642985);owner=coffea | |
| 2765 chr1 manual_curation exon 4434041 4434362 . - . Parent=GSCOCT00009713001 | |
| 2766 chr1 manual_curation exon 4433893 4433944 . - . Parent=GSCOCT00009713001 | |
| 2767 chr1 manual_curation exon 4433300 4433495 . - . Parent=GSCOCT00009713001 | |
| 2768 chr1 manual_curation exon 4432828 4432907 . - . Parent=GSCOCT00009713001 | |
| 2769 chr1 manual_curation exon 4432580 4432696 . - . Parent=GSCOCT00009713001 | |
| 2770 chr1 manual_curation exon 4432210 4432260 . - . Parent=GSCOCT00009713001 | |
| 2771 chr1 manual_curation exon 4429666 4429732 . - . Parent=GSCOCT00009713001 | |
| 2772 chr1 manual_curation exon 4429008 4429111 . - . Parent=GSCOCT00009713001 | |
| 2773 chr1 manual_curation exon 4428813 4428917 . - . Parent=GSCOCT00009713001 | |
| 2774 chr1 manual_curation exon 4428140 4428724 . - . Parent=GSCOCT00009713001 | |
| 2775 chr1 manual_curation CDS 4434041 4434123 . - 0 Parent=GSCOCT00009713001 | |
| 2776 chr1 manual_curation CDS 4433893 4433944 . - 2 Parent=GSCOCT00009713001 | |
| 2777 chr1 manual_curation CDS 4433300 4433495 . - 0 Parent=GSCOCT00009713001 | |
| 2778 chr1 manual_curation CDS 4432828 4432907 . - 1 Parent=GSCOCT00009713001 | |
| 2779 chr1 manual_curation CDS 4432580 4432696 . - 0 Parent=GSCOCT00009713001 | |
| 2780 chr1 manual_curation CDS 4432210 4432260 . - 0 Parent=GSCOCT00009713001 | |
| 2781 chr1 manual_curation CDS 4429666 4429732 . - 0 Parent=GSCOCT00009713001 | |
| 2782 chr1 manual_curation CDS 4429008 4429111 . - 1 Parent=GSCOCT00009713001 | |
| 2783 chr1 manual_curation CDS 4428813 4428917 . - 0 Parent=GSCOCT00009713001 | |
| 2784 chr1 manual_curation CDS 4428563 4428724 . - 0 Parent=GSCOCT00009713001 | |
| 2785 chr1 manual_curation gene 4442421 4447569 . + . ID=GSCOCG00009712001;Name=Cc01_g02410 | |
| 2786 chr1 manual_curation mRNA 4442421 4447569 . + . ID=GSCOCT00009712001;Parent=GSCOCG00009712001;Name=Cc01_g02410 | |
| 2787 chr1 manual_curation polypeptide 4443262 4447270 . + . ID=GSCOCP00009712001;Dbxref=TAIR:AT2G31130.1,TrEMBL:A5ADJ6,TrEMBL:F6H1X5,TrEMBL:Q6UA04;Derives_from=GSCOCT00009712001;Name=Cc01_g02410;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009712001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(628194..628286%2C625901..627935%2C625431..625585%2C624278..624469));owner=coffea | |
| 2788 chr1 manual_curation exon 4442421 4442547 . + . Parent=GSCOCT00009712001 | |
| 2789 chr1 manual_curation exon 4447079 4447569 . + . Parent=GSCOCT00009712001 | |
| 2790 chr1 manual_curation exon 4445963 4446117 . + . Parent=GSCOCT00009712001 | |
| 2791 chr1 manual_curation exon 4443613 4445647 . + . Parent=GSCOCT00009712001 | |
| 2792 chr1 manual_curation exon 4443176 4443354 . + . Parent=GSCOCT00009712001 | |
| 2793 chr1 manual_curation CDS 4447079 4447270 . + 0 Parent=GSCOCT00009712001 | |
| 2794 chr1 manual_curation CDS 4445963 4446117 . + 1 Parent=GSCOCT00009712001 | |
| 2795 chr1 manual_curation CDS 4443613 4445647 . + 0 Parent=GSCOCT00009712001 | |
| 2796 chr1 manual_curation CDS 4443262 4443354 . + 0 Parent=GSCOCT00009712001 | |
| 2797 chr1 manual_curation gene 4461678 4463305 . + . ID=GSCOCG00009711001;Name=Cc01_g02420 | |
| 2798 chr1 manual_curation mRNA 4461678 4463305 . + . ID=GSCOCT00009711001;Parent=GSCOCG00009711001;Name=Cc01_g02420 | |
| 2799 chr1 manual_curation polypeptide 4461757 4463001 . + . ID=GSCOCP00009711001;Dbxref=InterPro:IPR003612,InterPro:IPR016140,PFAM:PF00234,SMART:SM00499,SUPERFAMILY:SSF47699,TAIR:AT1G55260.1,TAIR:AT2G44290.1,TAIR:AT2G44300.1,TrEMBL:A5B703,TrEMBL:D7SLG3,TrEMBL:I1LN15;Derives_from=GSCOCT00009711001;Name=Cc01_g02420;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009711001~ Putative Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein~ unknown_gene~ complete;original_location=complement(join(609449..609791%2C608838..608924%2C608547..608692));owner=coffea | |
| 2800 chr1 manual_curation exon 4462856 4463305 . + . Parent=GSCOCT00009711001 | |
| 2801 chr1 manual_curation exon 4462624 4462710 . + . Parent=GSCOCT00009711001 | |
| 2802 chr1 manual_curation exon 4461678 4462099 . + . Parent=GSCOCT00009711001 | |
| 2803 chr1 manual_curation CDS 4462856 4463001 . + 1 Parent=GSCOCT00009711001 | |
| 2804 chr1 manual_curation CDS 4462624 4462710 . + 1 Parent=GSCOCT00009711001 | |
| 2805 chr1 manual_curation CDS 4461757 4462099 . + 0 Parent=GSCOCT00009711001 | |
| 2806 chr1 manual_curation gene 4481436 4486286 . + . ID=GSCOCG00009710001;Name=Cc01_g02430 | |
| 2807 chr1 manual_curation mRNA 4481436 4486286 . + . ID=GSCOCT00009710001;Parent=GSCOCG00009710001;Name=Cc01_g02430 | |
| 2808 chr1 manual_curation polypeptide 4481671 4485529 . + . ID=GSCOCP00009710001;Dbxref=GENE3D:G3DSA:2.30.240.10,InterPro:IPR007493,PFAM:PF04398,TAIR:AT1G55265.1,TAIR:AT5G19860.1,TAIR:AT5G54530.1,TrEMBL:B4UWA3,TrEMBL:F4YFD9,TrEMBL:I1KSA2;Derives_from=GSCOCT00009710001;Name=Cc01_g02430;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function%2C DUF538,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009710001~ Protein of unknown function%2C DUF538~ unknown_gene~ complete;original_location=complement(join(589380..589877%2C586019..586063));owner=coffea | |
| 2809 chr1 manual_curation exon 4485485 4486286 . + . Parent=GSCOCT00009710001 | |
| 2810 chr1 manual_curation exon 4481436 4482168 . + . Parent=GSCOCT00009710001 | |
| 2811 chr1 manual_curation CDS 4485485 4485529 . + 0 Parent=GSCOCT00009710001 | |
| 2812 chr1 manual_curation CDS 4481671 4482168 . + 0 Parent=GSCOCT00009710001 | |
| 2813 chr1 manual_curation gene 4518213 4524949 . + . ID=GSCOCG00009708001;Name=Cc01_g02440 | |
| 2814 chr1 manual_curation mRNA 4518213 4524949 . + . ID=GSCOCT00009708001;Parent=GSCOCG00009708001;Name=Cc01_g02440 | |
| 2815 chr1 manual_curation polypeptide 4518260 4524723 . + . ID=GSCOCP00009708001;Dbxref=InterPro:IPR001563,PANTHER:PTHR11802,PFAM:PF00450,PRINTS:PR00724,SwissProt:Q2V465,SwissProt:Q9C7Z9,SwissProt:Q9SQX6,TAIR:AT1G73300.1,TAIR:AT3G10450.1,TAIR:AT3G12203.1,TrEMBL:B0I1I1,TrEMBL:B9R6Y4,TrEMBL:F6H185;Derives_from=GSCOCT00009708001;Name=Cc01_g02440;Ontology_term=CC_evidence_code:ISS,GO:0004185,GO:0006508,CC_EC_number:3.4.16.5,PRODUCT:Serine carboxypeptidase-like 18,CC_functional_completeness:complete,CC_gene:SCPL18,CC_gene:SCPL7,CC_gene:SCPL11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009708001~ Serine carboxypeptidase-like 18~ SCPL18~ complete;original_location=complement(join(553134..553288%2C552889..553034%2C552612..552688%2C552321..552443%2C549418..549520%2C548896..548933%2C548624..548725%2C548423..548509%2C548073..548234%2C547775..547840%2C547350..547468%2C547135..547248%2C546981..547056%2C546825..546908));owner=coffea | |
| 2816 chr1 manual_curation exon 4524640 4524949 . + . Parent=GSCOCT00009708001 | |
| 2817 chr1 manual_curation exon 4524492 4524567 . + . Parent=GSCOCT00009708001 | |
| 2818 chr1 manual_curation exon 4524300 4524413 . + . Parent=GSCOCT00009708001 | |
| 2819 chr1 manual_curation exon 4524080 4524198 . + . Parent=GSCOCT00009708001 | |
| 2820 chr1 manual_curation exon 4523708 4523773 . + . Parent=GSCOCT00009708001 | |
| 2821 chr1 manual_curation exon 4523314 4523475 . + . Parent=GSCOCT00009708001 | |
| 2822 chr1 manual_curation exon 4523039 4523125 . + . Parent=GSCOCT00009708001 | |
| 2823 chr1 manual_curation exon 4522823 4522924 . + . Parent=GSCOCT00009708001 | |
| 2824 chr1 manual_curation exon 4522615 4522652 . + . Parent=GSCOCT00009708001 | |
| 2825 chr1 manual_curation exon 4522028 4522130 . + . Parent=GSCOCT00009708001 | |
| 2826 chr1 manual_curation exon 4519105 4519227 . + . Parent=GSCOCT00009708001 | |
| 2827 chr1 manual_curation exon 4518860 4518936 . + . Parent=GSCOCT00009708001 | |
| 2828 chr1 manual_curation exon 4518514 4518659 . + . Parent=GSCOCT00009708001 | |
| 2829 chr1 manual_curation exon 4518213 4518414 . + . Parent=GSCOCT00009708001 | |
| 2830 chr1 manual_curation CDS 4524640 4524723 . + 0 Parent=GSCOCT00009708001 | |
| 2831 chr1 manual_curation CDS 4524492 4524567 . + 2 Parent=GSCOCT00009708001 | |
| 2832 chr1 manual_curation CDS 4524300 4524413 . + 2 Parent=GSCOCT00009708001 | |
| 2833 chr1 manual_curation CDS 4524080 4524198 . + 0 Parent=GSCOCT00009708001 | |
| 2834 chr1 manual_curation CDS 4523708 4523773 . + 0 Parent=GSCOCT00009708001 | |
| 2835 chr1 manual_curation CDS 4523314 4523475 . + 0 Parent=GSCOCT00009708001 | |
| 2836 chr1 manual_curation CDS 4523039 4523125 . + 0 Parent=GSCOCT00009708001 | |
| 2837 chr1 manual_curation CDS 4522823 4522924 . + 0 Parent=GSCOCT00009708001 | |
| 2838 chr1 manual_curation CDS 4522615 4522652 . + 1 Parent=GSCOCT00009708001 | |
| 2839 chr1 manual_curation CDS 4522028 4522130 . + 0 Parent=GSCOCT00009708001 | |
| 2840 chr1 manual_curation CDS 4519105 4519227 . + 0 Parent=GSCOCT00009708001 | |
| 2841 chr1 manual_curation CDS 4518860 4518936 . + 1 Parent=GSCOCT00009708001 | |
| 2842 chr1 manual_curation CDS 4518514 4518659 . + 2 Parent=GSCOCT00009708001 | |
| 2843 chr1 manual_curation CDS 4518260 4518414 . + 0 Parent=GSCOCT00009708001 | |
| 2844 chr1 manual_curation gene 4584849 4586018 . + . ID=GSCOCG00009705001;Name=Cc01_g02450 | |
| 2845 chr1 manual_curation mRNA 4584849 4586018 . + . ID=GSCOCT00009705001;Parent=GSCOCG00009705001;Name=Cc01_g02450 | |
| 2846 chr1 manual_curation polypeptide 4584942 4585424 . + . ID=GSCOCP00009705001;Dbxref=GENE3D:G3DSA:2.30.240.10,InterPro:IPR007493,PFAM:PF04398,TAIR:AT1G55265.1,TAIR:AT3G07460.2,TAIR:AT5G19860.1,TrEMBL:A5C9A4,TrEMBL:D7KM80,TrEMBL:Q8LEJ7;Derives_from=GSCOCT00009705001;Name=Cc01_g02450;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of unknown function%2C DUF538,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009705001~ Putative Protein of unknown function%2C DUF538~ unknown_gene~ fragment;original_location=complement(486124..486606);owner=coffea | |
| 2847 chr1 manual_curation exon 4584849 4586018 . + . Parent=GSCOCT00009705001 | |
| 2848 chr1 manual_curation CDS 4584942 4585424 . + 0 Parent=GSCOCT00009705001 | |
| 2849 chr1 manual_curation gene 4600692 4605826 . - . ID=GSCOCG00009701001;Name=Cc01_g02460 | |
| 2850 chr1 manual_curation mRNA 4600692 4605826 . - . ID=GSCOCT00009701001;Parent=GSCOCG00009701001;Name=Cc01_g02460 | |
| 2851 chr1 manual_curation polypeptide 4601279 4605189 . - . ID=GSCOCP00009701001;Dbxref=GENE3D:G3DSA:2.120.10.80,InterPro:IPR001810,InterPro:IPR006652,InterPro:IPR011043,InterPro:IPR013089,InterPro:IPR015915,PANTHER:PTHR23230,PFAM:PF00646,PFAM:PF01344,SMART:SM00612,SUPERFAMILY:SSF50965,SwissProt:Q93W93,SwissProt:Q9C6Z0,SwissProt:Q9LM55,TAIR:AT1G22040.1,TAIR:AT1G30090.1,TAIR:AT1G55270.1,TrEMBL:A5C9A3,TrEMBL:B9GY93,TrEMBL:B9SM42;Derives_from=GSCOCT00009701001;Name=Cc01_g02460;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:F-box/kelch-repeat protein At1g55270,CC_functional_completeness:complete,CC_gene:At1g55270,CC_gene:At1g22040,CC_gene:At1g30090;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009701001~ F-box/kelch-repeat protein At1g55270~ At1g55270~ complete;original_location=join(466359..466421%2C469019..470269);owner=coffea | |
| 2852 chr1 manual_curation exon 4605127 4605826 . - . Parent=GSCOCT00009701001 | |
| 2853 chr1 manual_curation exon 4600692 4602529 . - . Parent=GSCOCT00009701001 | |
| 2854 chr1 manual_curation CDS 4605127 4605189 . - 0 Parent=GSCOCT00009701001 | |
| 2855 chr1 manual_curation CDS 4601279 4602529 . - 0 Parent=GSCOCT00009701001 | |
| 2856 chr1 manual_curation gene 4612933 4622192 . - . ID=GSCOCG00009700001;Name=Cc01_g02470 | |
| 2857 chr1 manual_curation mRNA 4612933 4622192 . - . ID=GSCOCT00009700001;Parent=GSCOCG00009700001;Name=Cc01_g02470 | |
| 2858 chr1 manual_curation polypeptide 4613564 4621251 . - . ID=GSCOCP00009700001;Dbxref=InterPro:IPR001650,InterPro:IPR011545,InterPro:IPR014001,InterPro:IPR014014,InterPro:IPR014021,PFAM:PF00270,PFAM:PF00271,PROFILE:PS51192,PROFILE:PS51194,PROFILE:PS51195,SMART:SM00487,SMART:SM00490,SwissProt:Q75HJ0,SwissProt:Q84W89,SwissProt:Q9M2F9,TAIR:AT2G42520.1,TAIR:AT3G58510.1,TAIR:AT3G58570.1,TrEMBL:A5B299,TrEMBL:F6HLF4,TrEMBL:I1LN13;Derives_from=GSCOCT00009700001;Name=Cc01_g02470;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0004386,GO:0005524,GO:0008026,CC_EC_number:missing_EC_number,PRODUCT:DEAD-box ATP-dependent RNA helicase 37,CC_functional_completeness:complete,CC_gene:RH37,CC_gene:RH52,CC_gene:PL10A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009700001~ DEAD-box ATP-dependent RNA helicase 37~ RH37~ complete;original_location=join(450297..450348%2C450400..451082%2C451172..451255%2C452315..452557%2C452972..453139%2C454095..454208%2C457505..457984);owner=coffea | |
| 2859 chr1 manual_curation exon 4621997 4622192 . - . Parent=GSCOCT00009700001 | |
| 2860 chr1 manual_curation exon 4621200 4621458 . - . Parent=GSCOCT00009700001 | |
| 2861 chr1 manual_curation exon 4620466 4621148 . - . Parent=GSCOCT00009700001 | |
| 2862 chr1 manual_curation exon 4620293 4620376 . - . Parent=GSCOCT00009700001 | |
| 2863 chr1 manual_curation exon 4618991 4619233 . - . Parent=GSCOCT00009700001 | |
| 2864 chr1 manual_curation exon 4618409 4618576 . - . Parent=GSCOCT00009700001 | |
| 2865 chr1 manual_curation exon 4617340 4617453 . - . Parent=GSCOCT00009700001 | |
| 2866 chr1 manual_curation exon 4612933 4614043 . - . Parent=GSCOCT00009700001 | |
| 2867 chr1 manual_curation CDS 4621200 4621251 . - 0 Parent=GSCOCT00009700001 | |
| 2868 chr1 manual_curation CDS 4620466 4621148 . - 1 Parent=GSCOCT00009700001 | |
| 2869 chr1 manual_curation CDS 4620293 4620376 . - 0 Parent=GSCOCT00009700001 | |
| 2870 chr1 manual_curation CDS 4618991 4619233 . - 0 Parent=GSCOCT00009700001 | |
| 2871 chr1 manual_curation CDS 4618409 4618576 . - 0 Parent=GSCOCT00009700001 | |
| 2872 chr1 manual_curation CDS 4617340 4617453 . - 0 Parent=GSCOCT00009700001 | |
| 2873 chr1 manual_curation CDS 4613564 4614043 . - 0 Parent=GSCOCT00009700001 | |
| 2874 chr1 manual_curation gene 4635911 4637026 . + . ID=GSCOCG00009699001;Name=Cc01_g02480 | |
| 2875 chr1 manual_curation mRNA 4635911 4637026 . + . ID=GSCOCT00009699001;Parent=GSCOCG00009699001;Name=Cc01_g02480 | |
| 2876 chr1 manual_curation polypeptide 4635911 4637026 . + . ID=GSCOCP00009699001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR000490,InterPro:IPR013781,InterPro:IPR017853,PFAM:PF00332,PROSITE:PS00587,SUPERFAMILY:SSF51445,SwissProt:P36401,SwissProt:Q02439,SwissProt:Q03773,TAIR:AT5G20330.1,TAIR:AT5G20340.1,TAIR:AT5G20390.1,TrEMBL:O49352,TrEMBL:Q8LEU0,TrEMBL:Q8VZ16;Derives_from=GSCOCT00009699001;Name=Cc01_g02480;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0043169,CC_EC_number:3.2.1.39,PRODUCT:Putative Glucan endo-1%2C3-beta-glucosidase,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009699001~ Putative Glucan endo-1%2C3-beta-glucosidase~ unknown_gene~ complete;original_location=complement(434522..435637);owner=coffea | |
| 2877 chr1 manual_curation exon 4635911 4637026 . + . Parent=GSCOCT00009699001 | |
| 2878 chr1 manual_curation CDS 4635911 4637026 . + 0 Parent=GSCOCT00009699001 | |
| 2879 chr1 manual_curation gene 4645038 4648202 . - . ID=GSCOCG00009697001;Name=Cc01_g02490 | |
| 2880 chr1 manual_curation mRNA 4645038 4648202 . - . ID=GSCOCT00009697001;Parent=GSCOCG00009697001;Name=Cc01_g02490 | |
| 2881 chr1 manual_curation polypeptide 4645038 4648202 . - . ID=GSCOCP00009697001;Dbxref=InterPro:IPR001611,InterPro:IPR002182,PFAM:PF00560,PFAM:PF00931,SwissProt:Q7XA39,SwissProt:Q7XA40,SwissProt:Q7XA42,TAIR:AT1G58400.1,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TrEMBL:B9GZ62,TrEMBL:B9NBC0,TrEMBL:B9P5D0;Derives_from=GSCOCT00009697001;Name=Cc01_g02490;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0005524,GO:0006915,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance protein RGA3,CC_functional_completeness:fragment,CC_gene:RGA3,CC_gene:RGA4,CC_gene:RGA1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009697001~ Putative disease resistance protein RGA3~ RGA3~ fragment;original_location=join(423346..423610%2C424385..426200%2C426264..426392%2C426438..426510);owner=coffea | |
| 2882 chr1 manual_curation exon 4647938 4648202 . - . Parent=GSCOCT00009697001 | |
| 2883 chr1 manual_curation exon 4645348 4647163 . - . Parent=GSCOCT00009697001 | |
| 2884 chr1 manual_curation exon 4645156 4645284 . - . Parent=GSCOCT00009697001 | |
| 2885 chr1 manual_curation exon 4645038 4645110 . - . Parent=GSCOCT00009697001 | |
| 2886 chr1 manual_curation CDS 4647938 4648202 . - 0 Parent=GSCOCT00009697001 | |
| 2887 chr1 manual_curation CDS 4645348 4647163 . - 1 Parent=GSCOCT00009697001 | |
| 2888 chr1 manual_curation CDS 4645156 4645284 . - 2 Parent=GSCOCT00009697001 | |
| 2889 chr1 manual_curation CDS 4645038 4645110 . - 2 Parent=GSCOCT00009697001 | |
| 2890 chr1 manual_curation gene 4699736 4703694 . - . ID=GSCOCG00009695001;Name=Cc01_g02500 | |
| 2891 chr1 manual_curation mRNA 4699736 4703694 . - . ID=GSCOCT00009695001;Parent=GSCOCG00009695001;Name=Cc01_g02500 | |
| 2892 chr1 manual_curation polypeptide 4699736 4703694 . - . ID=GSCOCP00009695001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q7XA39,SwissProt:Q7XA40,SwissProt:Q7XBQ9,TAIR:AT3G14470.1,TAIR:AT5G35450.1,TAIR:AT5G48620.1,TrEMBL:B9FQN0,TrEMBL:B9GUS0,TrEMBL:I1N910;Derives_from=GSCOCT00009695001;Name=Cc01_g02500;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:RGA4,CC_gene:RGA2,CC_gene:RGA3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009695001~ Putative uncharacterized protein~ RGA4~ fragment;original_location=join(367854..368322%2C368736..369035%2C370702..370793%2C370847..370960%2C371159..371310%2C371392..371812);owner=coffea | |
| 2893 chr1 manual_curation exon 4703226 4703694 . - . Parent=GSCOCT00009695001 | |
| 2894 chr1 manual_curation exon 4702513 4702812 . - . Parent=GSCOCT00009695001 | |
| 2895 chr1 manual_curation exon 4700755 4700846 . - . Parent=GSCOCT00009695001 | |
| 2896 chr1 manual_curation exon 4700588 4700701 . - . Parent=GSCOCT00009695001 | |
| 2897 chr1 manual_curation exon 4700238 4700389 . - . Parent=GSCOCT00009695001 | |
| 2898 chr1 manual_curation exon 4699736 4700156 . - . Parent=GSCOCT00009695001 | |
| 2899 chr1 manual_curation CDS 4703226 4703694 . - 0 Parent=GSCOCT00009695001 | |
| 2900 chr1 manual_curation CDS 4702513 4702812 . - 1 Parent=GSCOCT00009695001 | |
| 2901 chr1 manual_curation CDS 4700755 4700846 . - 1 Parent=GSCOCT00009695001 | |
| 2902 chr1 manual_curation CDS 4700588 4700701 . - 0 Parent=GSCOCT00009695001 | |
| 2903 chr1 manual_curation CDS 4700238 4700389 . - 0 Parent=GSCOCT00009695001 | |
| 2904 chr1 manual_curation CDS 4699736 4700156 . - 2 Parent=GSCOCT00009695001 | |
| 2905 chr1 manual_curation gene 4726678 4735212 . + . ID=GSCOCG00009694001;Name=Cc01_g02510 | |
| 2906 chr1 manual_curation mRNA 4726678 4735212 . + . ID=GSCOCT00009694001;Parent=GSCOCG00009694001;Name=Cc01_g02510 | |
| 2907 chr1 manual_curation polypeptide 4726903 4734334 . + . ID=GSCOCP00009694001;Dbxref=InterPro:IPR004843,InterPro:IPR006186,PANTHER:PTHR11668,PFAM:PF00149,PRINTS:PR00114,PROSITE:PS00125,SMART:SM00156,SwissProt:Q07100,SwissProt:Q9XGH7,TAIR:AT1G10430.1,TAIR:AT2G42500.1,TrEMBL:A5AT05,TrEMBL:B9GLH3,TrEMBL:B9GY91;Derives_from=GSCOCT00009694001;Name=Cc01_g02510;Ontology_term=CC_evidence_code:ISS,GO:0016787,CC_EC_number:3.1.3.16,PRODUCT:Serine/threonine-protein phosphatase PP2A catalytic subunit,CC_functional_completeness:complete,CC_gene:PP2A3,CC_gene:PP2A4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009694001~ Serine/threonine-protein phosphatase PP2A catalytic subunit~ PP2A3~ complete;original_location=complement(join(344541..344645%2C342962..343018%2C342013..342096%2C341540..341611%2C340649..340720%2C340305..340345%2C339238..339304%2C337826..338017%2C337653..337742%2C337434..337541%2C337214..337279));owner=coffea | |
| 2908 chr1 manual_curation exon 4734269 4735212 . + . Parent=GSCOCT00009694001 | |
| 2909 chr1 manual_curation exon 4734007 4734114 . + . Parent=GSCOCT00009694001 | |
| 2910 chr1 manual_curation exon 4733806 4733895 . + . Parent=GSCOCT00009694001 | |
| 2911 chr1 manual_curation exon 4733531 4733722 . + . Parent=GSCOCT00009694001 | |
| 2912 chr1 manual_curation exon 4732244 4732310 . + . Parent=GSCOCT00009694001 | |
| 2913 chr1 manual_curation exon 4731203 4731243 . + . Parent=GSCOCT00009694001 | |
| 2914 chr1 manual_curation exon 4730828 4730899 . + . Parent=GSCOCT00009694001 | |
| 2915 chr1 manual_curation exon 4729937 4730008 . + . Parent=GSCOCT00009694001 | |
| 2916 chr1 manual_curation exon 4729452 4729535 . + . Parent=GSCOCT00009694001 | |
| 2917 chr1 manual_curation exon 4728530 4728586 . + . Parent=GSCOCT00009694001 | |
| 2918 chr1 manual_curation exon 4726678 4727007 . + . Parent=GSCOCT00009694001 | |
| 2919 chr1 manual_curation CDS 4734269 4734334 . + 0 Parent=GSCOCT00009694001 | |
| 2920 chr1 manual_curation CDS 4734007 4734114 . + 0 Parent=GSCOCT00009694001 | |
| 2921 chr1 manual_curation CDS 4733806 4733895 . + 0 Parent=GSCOCT00009694001 | |
| 2922 chr1 manual_curation CDS 4733531 4733722 . + 0 Parent=GSCOCT00009694001 | |
| 2923 chr1 manual_curation CDS 4732244 4732310 . + 2 Parent=GSCOCT00009694001 | |
| 2924 chr1 manual_curation CDS 4731203 4731243 . + 0 Parent=GSCOCT00009694001 | |
| 2925 chr1 manual_curation CDS 4730828 4730899 . + 0 Parent=GSCOCT00009694001 | |
| 2926 chr1 manual_curation CDS 4729937 4730008 . + 0 Parent=GSCOCT00009694001 | |
| 2927 chr1 manual_curation CDS 4729452 4729535 . + 0 Parent=GSCOCT00009694001 | |
| 2928 chr1 manual_curation CDS 4728530 4728586 . + 0 Parent=GSCOCT00009694001 | |
| 2929 chr1 manual_curation CDS 4726903 4727007 . + 0 Parent=GSCOCT00009694001 | |
| 2930 chr1 manual_curation gene 4751718 4753782 . - . ID=GSCOCG00009692001;Name=Cc01_g02520 | |
| 2931 chr1 manual_curation mRNA 4751718 4753782 . - . ID=GSCOCT00009692001;Parent=GSCOCG00009692001;Name=Cc01_g02520 | |
| 2932 chr1 manual_curation polypeptide 4751718 4753782 . - . ID=GSCOCP00009692001;Dbxref=GENE3D:G3DSA:1.10.600.10,InterPro:IPR002060,InterPro:IPR008949,InterPro:IPR019845,PFAM:PF00494,PROSITE:PS01045,SUPERFAMILY:SSF48576,SwissProt:P08196,SwissProt:P37273,SwissProt:P49293,TAIR:AT5G17230.3,TrEMBL:B9SM48,TrEMBL:F8U9A7,TrEMBL:G7JA42;Derives_from=GSCOCT00009692001;Name=Cc01_g02520;Ontology_term=CC_evidence_code:ISS,GO:0009058,GO:0016740,CC_EC_number:missing_EC_number,PRODUCT:Phytoene synthase 1%2C chloroplastic,CC_functional_completeness:complete,CC_gene:PSY1,CC_gene:PSY,CC_gene:PSY2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009692001~ Phytoene synthase 1%2C chloroplastic~ PSY1~ complete;original_location=join(317766..318099%2C318477..318527%2C318689..318861%2C318942..319177%2C319272..319464%2C319627..319830);owner=coffea | |
| 2933 chr1 manual_curation exon 4753449 4753782 . - . Parent=GSCOCT00009692001 | |
| 2934 chr1 manual_curation exon 4753021 4753071 . - . Parent=GSCOCT00009692001 | |
| 2935 chr1 manual_curation exon 4752687 4752859 . - . Parent=GSCOCT00009692001 | |
| 2936 chr1 manual_curation exon 4752371 4752606 . - . Parent=GSCOCT00009692001 | |
| 2937 chr1 manual_curation exon 4752084 4752276 . - . Parent=GSCOCT00009692001 | |
| 2938 chr1 manual_curation exon 4751718 4751921 . - . Parent=GSCOCT00009692001 | |
| 2939 chr1 manual_curation CDS 4753449 4753782 . - 0 Parent=GSCOCT00009692001 | |
| 2940 chr1 manual_curation CDS 4753021 4753071 . - 1 Parent=GSCOCT00009692001 | |
| 2941 chr1 manual_curation CDS 4752687 4752859 . - 1 Parent=GSCOCT00009692001 | |
| 2942 chr1 manual_curation CDS 4752371 4752606 . - 0 Parent=GSCOCT00009692001 | |
| 2943 chr1 manual_curation CDS 4752084 4752276 . - 2 Parent=GSCOCT00009692001 | |
| 2944 chr1 manual_curation CDS 4751718 4751921 . - 0 Parent=GSCOCT00009692001 | |
| 2945 chr1 manual_curation gene 4770001 4774937 . - . ID=GSCOCG00009689001;Name=Cc01_g02530 | |
| 2946 chr1 manual_curation mRNA 4770001 4774937 . - . ID=GSCOCT00009689001;Parent=GSCOCG00009689001;Name=Cc01_g02530 | |
| 2947 chr1 manual_curation polypeptide 4770239 4774878 . - . ID=GSCOCP00009689001;Dbxref=TAIR:AT1G55280.1,TrEMBL:D7SLH3,TrEMBL:G7LHY7,TrEMBL:I1KSB0;Derives_from=GSCOCT00009689001;Name=Cc01_g02530;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Lipase/lipooxygenase%2C PLAT/LH2 family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009689001~ Putative Lipase/lipooxygenase%2C PLAT/LH2 family protein~ unknown_gene~ complete;original_location=join(296670..296817%2C297870..298253%2C300603..301309);owner=coffea | |
| 2948 chr1 manual_curation exon 4774731 4774937 . - . Parent=GSCOCT00009689001 | |
| 2949 chr1 manual_curation exon 4773295 4773678 . - . Parent=GSCOCT00009689001 | |
| 2950 chr1 manual_curation exon 4770001 4770945 . - . Parent=GSCOCT00009689001 | |
| 2951 chr1 manual_curation CDS 4774731 4774878 . - 0 Parent=GSCOCT00009689001 | |
| 2952 chr1 manual_curation CDS 4773295 4773678 . - 1 Parent=GSCOCT00009689001 | |
| 2953 chr1 manual_curation CDS 4770239 4770945 . - 1 Parent=GSCOCT00009689001 | |
| 2954 chr1 manual_curation gene 4780779 4782221 . + . ID=GSCOCG00009688001;Name=Cc01_g02540 | |
| 2955 chr1 manual_curation mRNA 4780779 4782221 . + . ID=GSCOCT00009688001;Parent=GSCOCG00009688001;Name=Cc01_g02540 | |
| 2956 chr1 manual_curation polypeptide 4780779 4782221 . + . ID=GSCOCP00009688001;Dbxref=InterPro:IPR002293,InterPro:IPR004841,PANTHER:PTHR11785,PFAM:PF00324,PIR:PIRSF006060,SwissProt:O34739,SwissProt:Q9WTR6,TAIR:AT1G31830.1,TAIR:AT3G13620.1,TAIR:AT5G05630.1,TrEMBL:B9GLG8,TrEMBL:B9SM54,TrEMBL:I1MAW8;Derives_from=GSCOCT00009688001;Name=Cc01_g02540;Ontology_term=CC_evidence_code:ISS,GO:0006810,GO:0006865,GO:0015171,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Amino acid permease family protein,CC_functional_completeness:complete,CC_gene:steT,CC_gene:Slc7a11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009688001~ Amino acid permease family protein~ steT~ complete;original_location=complement(289327..290769);owner=coffea | |
| 2957 chr1 manual_curation exon 4780779 4782221 . + . Parent=GSCOCT00009688001 | |
| 2958 chr1 manual_curation CDS 4780779 4782221 . + 0 Parent=GSCOCT00009688001 | |
| 2959 chr1 manual_curation gene 4799257 4800468 . - . ID=GSCOCG00009684001;Name=Cc01_g02550 | |
| 2960 chr1 manual_curation mRNA 4799257 4800468 . - . ID=GSCOCT00009684001;Parent=GSCOCG00009684001;Name=Cc01_g02550 | |
| 2961 chr1 manual_curation polypeptide 4799320 4800468 . - . ID=GSCOCP00009684001;Dbxref=InterPro:IPR001810,InterPro:IPR017451,InterPro:IPR022364,PFAM:PF00646,PROFILE:PS50181,SMART:SM00256,SUPERFAMILY:SSF81383,SwissProt:Q9FLS0,TAIR:AT5G07610.1,TIGRFAMs:TIGR01640,TrEMBL:B9HV09,TrEMBL:Q6V5B5,TrEMBL:Q6V5G6;Derives_from=GSCOCT00009684001;Name=Cc01_g02550;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative F-box protein At5g07610,CC_functional_completeness:complete,CC_gene:At5g07610;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009684001~ Putative F-box protein At5g07610~ At5g07610~ complete;original_location=271080..272228;owner=coffea | |
| 2962 chr1 manual_curation exon 4799257 4800468 . - . Parent=GSCOCT00009684001 | |
| 2963 chr1 manual_curation CDS 4799320 4800468 . - 0 Parent=GSCOCT00009684001 | |
| 2964 chr1 manual_curation gene 4803465 4804904 . + . ID=GSCOCG00009683001;Name=Cc01_g02560 | |
| 2965 chr1 manual_curation mRNA 4803465 4804904 . + . ID=GSCOCT00009683001;Parent=GSCOCG00009683001;Name=Cc01_g02560 | |
| 2966 chr1 manual_curation polypeptide 4803465 4804904 . + . ID=GSCOCP00009683001;Dbxref=InterPro:IPR002293,InterPro:IPR004841,PANTHER:PTHR11785,PFAM:PF00324,PIR:PIRSF006060,SwissProt:O34739,TAIR:AT1G31830.1,TAIR:AT3G13620.1,TAIR:AT5G05630.1,TrEMBL:B9GLG7,TrEMBL:B9SM54,TrEMBL:F6GUJ8;Derives_from=GSCOCT00009683001;Name=Cc01_g02560;Ontology_term=CC_evidence_code:ISS,GO:0006810,GO:0006865,GO:0015171,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Amino acid permease family protein,CC_functional_completeness:complete,CC_gene:steT;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009683001~ Amino acid permease family protein~ steT~ complete;original_location=complement(266644..268083);owner=coffea | |
| 2967 chr1 manual_curation exon 4803465 4804904 . + . Parent=GSCOCT00009683001 | |
| 2968 chr1 manual_curation CDS 4803465 4804904 . + 0 Parent=GSCOCT00009683001 | |
| 2969 chr1 manual_curation gene 4839601 4840611 . + . ID=GSCOCG00009679001;Name=Cc01_g02570 | |
| 2970 chr1 manual_curation mRNA 4839601 4840611 . + . ID=GSCOCT00009679001;Parent=GSCOCG00009679001;Name=Cc01_g02570 | |
| 2971 chr1 manual_curation polypeptide 4839601 4840611 . + . ID=GSCOCP00009679001;Dbxref=GENE3D:G3DSA:2.120.10.80,InterPro:IPR001810,InterPro:IPR006652,InterPro:IPR011043,InterPro:IPR013089,InterPro:IPR015915,PANTHER:PTHR23230,PFAM:PF00646,PFAM:PF01344,SMART:SM00256,SMART:SM00612,SUPERFAMILY:SSF50965,SwissProt:O80582,SwissProt:Q9LMR5,SwissProt:Q9M1Y1,TAIR:AT1G15670.1,TAIR:AT2G44130.1,TAIR:AT3G59940.1,TrEMBL:A5CA82,TrEMBL:B9GLG5,TrEMBL:B9GY86;Derives_from=GSCOCT00009679001;Name=Cc01_g02570;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative F-box/kelch-repeat protein At1g15670,CC_functional_completeness:complete,CC_gene:At2g44130,CC_gene:SKIP20,CC_gene:At1g15670;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009679001~ Putative F-box/kelch-repeat protein At1g15670~ At2g44130~ complete;original_location=complement(230937..231947);owner=coffea | |
| 2972 chr1 manual_curation exon 4839601 4840611 . + . Parent=GSCOCT00009679001 | |
| 2973 chr1 manual_curation CDS 4839601 4840611 . + 0 Parent=GSCOCT00009679001 | |
| 2974 chr1 manual_curation gene 4849302 4851652 . - . ID=GSCOCG00009678001;Name=Cc01_g02580 | |
| 2975 chr1 manual_curation mRNA 4849302 4851652 . - . ID=GSCOCT00009678001;Parent=GSCOCG00009678001;Name=Cc01_g02580 | |
| 2976 chr1 manual_curation polypeptide 4850436 4851652 . - . ID=GSCOCP00009678001;Derives_from=GSCOCT00009678001;Name=Cc01_g02580;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009678001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(219896..219930%2C220851..220925%2C221037..221112);owner=coffea | |
| 2977 chr1 manual_curation exon 4849999 4850181 . - . Parent=GSCOCT00009678001 | |
| 2978 chr1 manual_curation exon 4849302 4849514 . - . Parent=GSCOCT00009678001 | |
| 2979 chr1 manual_curation exon 4851618 4851652 . - . Parent=GSCOCT00009678001 | |
| 2980 chr1 manual_curation exon 4850623 4850697 . - . Parent=GSCOCT00009678001 | |
| 2981 chr1 manual_curation exon 4850302 4850511 . - . Parent=GSCOCT00009678001 | |
| 2982 chr1 manual_curation CDS 4851618 4851652 . - 0 Parent=GSCOCT00009678001 | |
| 2983 chr1 manual_curation CDS 4850623 4850697 . - 2 Parent=GSCOCT00009678001 | |
| 2984 chr1 manual_curation CDS 4850436 4850511 . - 2 Parent=GSCOCT00009678001 | |
| 2985 chr1 manual_curation gene 4851725 4852549 . - . ID=GSCOCG00009677001;Name=Cc01_g02590 | |
| 2986 chr1 manual_curation mRNA 4851725 4852549 . - . ID=GSCOCT00009677001;Parent=GSCOCG00009677001;Name=Cc01_g02590 | |
| 2987 chr1 manual_curation polypeptide 4851725 4852549 . - . ID=GSCOCP00009677001;Derives_from=GSCOCT00009677001;Name=Cc01_g02590;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009677001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(218999..219109%2C219719..219823);owner=coffea | |
| 2988 chr1 manual_curation exon 4852439 4852549 . - . Parent=GSCOCT00009677001 | |
| 2989 chr1 manual_curation exon 4851725 4851829 . - . Parent=GSCOCT00009677001 | |
| 2990 chr1 manual_curation CDS 4852439 4852549 . - 0 Parent=GSCOCT00009677001 | |
| 2991 chr1 manual_curation CDS 4851725 4851829 . - 0 Parent=GSCOCT00009677001 | |
| 2992 chr1 manual_curation gene 4860236 4864217 . - . ID=GSCOCG00009676001;Name=Cc01_g02600 | |
| 2993 chr1 manual_curation mRNA 4860236 4864217 . - . ID=GSCOCT00009676001;Parent=GSCOCG00009676001;Name=Cc01_g02600 | |
| 2994 chr1 manual_curation polypeptide 4861171 4864217 . - . ID=GSCOCP00009676001;Dbxref=InterPro:IPR000767,PRINTS:PR00364,SwissProt:Q7XA39,SwissProt:Q7XA40,SwissProt:Q7XA42,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TrEMBL:B9IBB8,TrEMBL:B9N7Y1,TrEMBL:B9NDT4;Derives_from=GSCOCT00009676001;Name=Cc01_g02600;Ontology_term=CC_evidence_code:ISS,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance protein RGA4,CC_functional_completeness:fragment,CC_gene:RGA4,CC_gene:RGA3,CC_gene:RGA1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009676001~ Putative disease resistance protein RGA4~ RGA4~ fragment;original_location=join(207331..207906%2C208570..209201%2C210110..210377);owner=coffea | |
| 2995 chr1 manual_curation exon 4860474 4860548 . - . Parent=GSCOCT00009676001 | |
| 2996 chr1 manual_curation exon 4860236 4860386 . - . Parent=GSCOCT00009676001 | |
| 2997 chr1 manual_curation exon 4863642 4864217 . - . Parent=GSCOCT00009676001 | |
| 2998 chr1 manual_curation exon 4862347 4862978 . - . Parent=GSCOCT00009676001 | |
| 2999 chr1 manual_curation exon 4861118 4861438 . - . Parent=GSCOCT00009676001 | |
| 3000 chr1 manual_curation CDS 4863642 4864217 . - 0 Parent=GSCOCT00009676001 | |
| 3001 chr1 manual_curation CDS 4862347 4862978 . - 0 Parent=GSCOCT00009676001 | |
| 3002 chr1 manual_curation CDS 4861171 4861438 . - 2 Parent=GSCOCT00009676001 | |
| 3003 chr1 manual_curation gene 4875632 4879202 . - . ID=GSCOCG00009674001;Name=Cc01_g02610 | |
| 3004 chr1 manual_curation mRNA 4875632 4879202 . - . ID=GSCOCT00009674001;Parent=GSCOCG00009674001;Name=Cc01_g02610 | |
| 3005 chr1 manual_curation polypeptide 4876370 4878903 . - . ID=GSCOCP00009674001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:A6YIH8,SwissProt:O48923,SwissProt:P98183,TAIR:AT3G26300.1,TAIR:AT3G26310.1,TAIR:AT3G26330.1,TrEMBL:G7K4E6,TrEMBL:G7K4E8,TrEMBL:I1JJH9;Derives_from=GSCOCT00009674001;Name=Cc01_g02610;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.68,PRODUCT:Cytochrome P450 71D10,CC_functional_completeness:complete,CC_gene:CYP71D10,CC_gene:CYP71D12,CC_gene:CYP71D55;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009674001~ Cytochrome P450 71D10~ CYP71D10~ complete;original_location=join(192645..193280%2C194537..194768%2C194808..195178);owner=coffea | |
| 3006 chr1 manual_curation exon 4878268 4879202 . - . Parent=GSCOCT00009674001 | |
| 3007 chr1 manual_curation exon 4876780 4877011 . - . Parent=GSCOCT00009674001 | |
| 3008 chr1 manual_curation exon 4875632 4876740 . - . Parent=GSCOCT00009674001 | |
| 3009 chr1 manual_curation CDS 4878268 4878903 . - 0 Parent=GSCOCT00009674001 | |
| 3010 chr1 manual_curation CDS 4876780 4877011 . - 0 Parent=GSCOCT00009674001 | |
| 3011 chr1 manual_curation CDS 4876370 4876740 . - 1 Parent=GSCOCT00009674001 | |
| 3012 chr1 manual_curation gene 4914174 4922023 . - . ID=GSCOCG00009671001;Name=Cc01_g02620 | |
| 3013 chr1 manual_curation mRNA 4914174 4922023 . - . ID=GSCOCT00009671001;Parent=GSCOCG00009671001;Name=Cc01_g02620 | |
| 3014 chr1 manual_curation polypeptide 4914573 4922023 . - . ID=GSCOCP00009671001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:O23051,SwissProt:Q9AXH9,SwissProt:Q9C5Y2,TAIR:AT1G05160.1,TAIR:AT2G32440.1,TAIR:AT3G19270.1,TrEMBL:B9I311,TrEMBL:F2DIX6,TrEMBL:F2DSD8;Derives_from=GSCOCT00009671001;Name=Cc01_g02620;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.79,PRODUCT:Putative Ent-kaurenoic acid oxidase 1,CC_functional_completeness:complete,CC_gene:KAO1,CC_gene:KAO2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009671001~ Putative Ent-kaurenoic acid oxidase 1~ KAO1~ complete;original_location=join(149525..149769%2C151257..151581%2C152181..152330%2C155071..155333%2C155914..155993%2C156130..156222%2C156385..156491%2C156582..156700%2C156885..156975);owner=coffea | |
| 3015 chr1 manual_curation exon 4921779 4922023 . - . Parent=GSCOCT00009671001 | |
| 3016 chr1 manual_curation exon 4919967 4920291 . - . Parent=GSCOCT00009671001 | |
| 3017 chr1 manual_curation exon 4919218 4919367 . - . Parent=GSCOCT00009671001 | |
| 3018 chr1 manual_curation exon 4916215 4916477 . - . Parent=GSCOCT00009671001 | |
| 3019 chr1 manual_curation exon 4915555 4915634 . - . Parent=GSCOCT00009671001 | |
| 3020 chr1 manual_curation exon 4915326 4915418 . - . Parent=GSCOCT00009671001 | |
| 3021 chr1 manual_curation exon 4915057 4915163 . - . Parent=GSCOCT00009671001 | |
| 3022 chr1 manual_curation exon 4914848 4914966 . - . Parent=GSCOCT00009671001 | |
| 3023 chr1 manual_curation exon 4914174 4914663 . - . Parent=GSCOCT00009671001 | |
| 3024 chr1 manual_curation CDS 4921779 4922023 . - 0 Parent=GSCOCT00009671001 | |
| 3025 chr1 manual_curation CDS 4919967 4920291 . - 2 Parent=GSCOCT00009671001 | |
| 3026 chr1 manual_curation CDS 4919218 4919367 . - 0 Parent=GSCOCT00009671001 | |
| 3027 chr1 manual_curation CDS 4916215 4916477 . - 0 Parent=GSCOCT00009671001 | |
| 3028 chr1 manual_curation CDS 4915555 4915634 . - 2 Parent=GSCOCT00009671001 | |
| 3029 chr1 manual_curation CDS 4915326 4915418 . - 1 Parent=GSCOCT00009671001 | |
| 3030 chr1 manual_curation CDS 4915057 4915163 . - 1 Parent=GSCOCT00009671001 | |
| 3031 chr1 manual_curation CDS 4914848 4914966 . - 0 Parent=GSCOCT00009671001 | |
| 3032 chr1 manual_curation CDS 4914573 4914663 . - 2 Parent=GSCOCT00009671001 | |
| 3033 chr1 manual_curation gene 4994429 4997291 . - . ID=GSCOCG00009670001;Name=Cc01_g02630 | |
| 3034 chr1 manual_curation mRNA 4994429 4997291 . - . ID=GSCOCT00009670001;Parent=GSCOCG00009670001;Name=Cc01_g02630 | |
| 3035 chr1 manual_curation polypeptide 4995798 4997291 . - . ID=GSCOCP00009670001;Dbxref=InterPro:IPR001563,PANTHER:PTHR11802,PFAM:PF00450,SwissProt:Q9CAU2,SwissProt:Q9CAU3,SwissProt:Q9CAU4,TAIR:AT1G73290.1,TAIR:AT1G73300.1,TAIR:AT1G73310.1,TrEMBL:D7KR93,TrEMBL:F6H185,TrEMBL:Q9FX26;Derives_from=GSCOCT00009670001;Name=Cc01_g02630;Ontology_term=CC_evidence_code:ISS,GO:0004185,GO:0006508,CC_EC_number:3.4.16.5,PRODUCT:Serine carboxypeptidase-like 2,CC_functional_completeness:fragment,CC_gene:SCPL2,CC_gene:SCPL4,CC_gene:SCPL5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009670001~ Serine carboxypeptidase-like 2~ SCPL2~ fragment;original_location=join(74257..74411%2C74511..74757%2C75443..75565%2C75709..75750);owner=coffea | |
| 3036 chr1 manual_curation exon 4997137 4997291 . - . Parent=GSCOCT00009670001 | |
| 3037 chr1 manual_curation exon 4996791 4997037 . - . Parent=GSCOCT00009670001 | |
| 3038 chr1 manual_curation exon 4995983 4996105 . - . Parent=GSCOCT00009670001 | |
| 3039 chr1 manual_curation exon 4994429 4995839 . - . Parent=GSCOCT00009670001 | |
| 3040 chr1 manual_curation CDS 4997137 4997291 . - 0 Parent=GSCOCT00009670001 | |
| 3041 chr1 manual_curation CDS 4996791 4997037 . - 2 Parent=GSCOCT00009670001 | |
| 3042 chr1 manual_curation CDS 4995983 4996105 . - 0 Parent=GSCOCT00009670001 | |
| 3043 chr1 manual_curation CDS 4995798 4995839 . - 0 Parent=GSCOCT00009670001 | |
| 3044 chr1 manual_curation gene 5064909 5065576 . - . ID=GSCOCG00009669001;Name=Cc01_g02640 | |
| 3045 chr1 manual_curation mRNA 5064909 5065576 . - . ID=GSCOCT00009669001;Parent=GSCOCG00009669001;Name=Cc01_g02640 | |
| 3046 chr1 manual_curation polypeptide 5064909 5065576 . - . ID=GSCOCP00009669001;Dbxref=InterPro:IPR007122,PANTHER:PTHR11977,SwissProt:O81644,SwissProt:O81645,TAIR:AT2G41740.1,TAIR:AT3G57410.1,TAIR:AT4G30160.2,TrEMBL:B9H9T9,TrEMBL:B9II82,TrEMBL:D7THV1;Derives_from=GSCOCT00009669001;Name=Cc01_g02640;Ontology_term=CC_evidence_code:ISS,GO:0003779,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:VLN3,CC_gene:VLN2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009669001~ Hypothetical protein~ VLN3~ missing_functional_completeness;original_location=join(5972..6003%2C6194..6244%2C6465..6639);owner=coffea | |
| 3047 chr1 manual_curation exon 5065545 5065576 . - . Parent=GSCOCT00009669001 | |
| 3048 chr1 manual_curation exon 5065304 5065354 . - . Parent=GSCOCT00009669001 | |
| 3049 chr1 manual_curation exon 5064909 5065083 . - . Parent=GSCOCT00009669001 | |
| 3050 chr1 manual_curation CDS 5065545 5065576 . - 0 Parent=GSCOCT00009669001 | |
| 3051 chr1 manual_curation CDS 5065304 5065354 . - 2 Parent=GSCOCT00009669001 | |
| 3052 chr1 manual_curation CDS 5064909 5065083 . - 2 Parent=GSCOCT00009669001 | |
| 3053 chr1 manual_curation gene 5101257 5106496 . - . ID=GSCOCG00013191001;Name=Cc01_g02650 | |
| 3054 chr1 manual_curation mRNA 5101257 5106496 . - . ID=GSCOCT00013191001;Parent=GSCOCG00013191001;Name=Cc01_g02650 | |
| 3055 chr1 manual_curation polypeptide 5101488 5106496 . - . ID=GSCOCP00013191001;Dbxref=InterPro:IPR001563,PANTHER:PTHR11802,PFAM:PF00450,PRINTS:PR00724,SwissProt:Q9C7D6,SwissProt:Q9C7Z9,SwissProt:Q9CAU3,TAIR:AT1G73300.1,TAIR:AT3G10450.1,TAIR:AT3G12203.1,TrEMBL:B0I1H8,TrEMBL:B9R6Y4,TrEMBL:F6H185;Derives_from=GSCOCT00013191001;Name=Cc01_g02650;Ontology_term=CC_evidence_code:ISS,GO:0004185,GO:0006508,CC_EC_number:3.4.16.5,PRODUCT:Serine carboxypeptidase-like 18,CC_functional_completeness:complete,CC_gene:SCPL18,CC_gene:SCPL2,CC_gene:SCPL17;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013191001~ Serine carboxypeptidase-like 18~ SCPL18~ complete;original_location=complement(join(34695..34849%2C34450..34595%2C34174..34250%2C33881..34003%2C32855..32957%2C31950..31987%2C31690..31791%2C31482..31568%2C31140..31301%2C30858..30888%2C30388..30493%2C30173..30286%2C29997..30072%2C29841..29894));owner=coffea | |
| 3056 chr1 manual_curation exon 5101257 5101541 . - . Parent=GSCOCT00013191001 | |
| 3057 chr1 manual_curation exon 5101644 5101719 . - . Parent=GSCOCT00013191001 | |
| 3058 chr1 manual_curation exon 5101820 5101933 . - . Parent=GSCOCT00013191001 | |
| 3059 chr1 manual_curation exon 5102035 5102140 . - . Parent=GSCOCT00013191001 | |
| 3060 chr1 manual_curation exon 5102505 5102535 . - . Parent=GSCOCT00013191001 | |
| 3061 chr1 manual_curation exon 5102787 5102948 . - . Parent=GSCOCT00013191001 | |
| 3062 chr1 manual_curation exon 5103129 5103215 . - . Parent=GSCOCT00013191001 | |
| 3063 chr1 manual_curation exon 5103337 5103438 . - . Parent=GSCOCT00013191001 | |
| 3064 chr1 manual_curation exon 5103597 5103634 . - . Parent=GSCOCT00013191001 | |
| 3065 chr1 manual_curation exon 5104502 5104604 . - . Parent=GSCOCT00013191001 | |
| 3066 chr1 manual_curation exon 5105528 5105650 . - . Parent=GSCOCT00013191001 | |
| 3067 chr1 manual_curation exon 5105821 5105897 . - . Parent=GSCOCT00013191001 | |
| 3068 chr1 manual_curation exon 5106097 5106242 . - . Parent=GSCOCT00013191001 | |
| 3069 chr1 manual_curation exon 5106342 5106496 . - . Parent=GSCOCT00013191001 | |
| 3070 chr1 manual_curation CDS 5101488 5101541 . - 0 Parent=GSCOCT00013191001 | |
| 3071 chr1 manual_curation CDS 5101644 5101719 . - 2 Parent=GSCOCT00013191001 | |
| 3072 chr1 manual_curation CDS 5101820 5101933 . - 2 Parent=GSCOCT00013191001 | |
| 3073 chr1 manual_curation CDS 5102035 5102140 . - 1 Parent=GSCOCT00013191001 | |
| 3074 chr1 manual_curation CDS 5102505 5102535 . - 0 Parent=GSCOCT00013191001 | |
| 3075 chr1 manual_curation CDS 5102787 5102948 . - 0 Parent=GSCOCT00013191001 | |
| 3076 chr1 manual_curation CDS 5103129 5103215 . - 0 Parent=GSCOCT00013191001 | |
| 3077 chr1 manual_curation CDS 5103337 5103438 . - 0 Parent=GSCOCT00013191001 | |
| 3078 chr1 manual_curation CDS 5103597 5103634 . - 1 Parent=GSCOCT00013191001 | |
| 3079 chr1 manual_curation CDS 5104502 5104604 . - 0 Parent=GSCOCT00013191001 | |
| 3080 chr1 manual_curation CDS 5105528 5105650 . - 0 Parent=GSCOCT00013191001 | |
| 3081 chr1 manual_curation CDS 5105821 5105897 . - 1 Parent=GSCOCT00013191001 | |
| 3082 chr1 manual_curation CDS 5106097 5106242 . - 2 Parent=GSCOCT00013191001 | |
| 3083 chr1 manual_curation CDS 5106342 5106496 . - 0 Parent=GSCOCT00013191001 | |
| 3084 chr1 manual_curation gene 5126747 5129364 . - . ID=GSCOCG00013192001;Name=Cc01_g02660 | |
| 3085 chr1 manual_curation mRNA 5126747 5129364 . - . ID=GSCOCT00013192001;Parent=GSCOCG00013192001;Name=Cc01_g02660 | |
| 3086 chr1 manual_curation polypeptide 5127048 5129138 . - . ID=GSCOCP00013192001;Dbxref=InterPro:IPR003480,PFAM:PF02458,SwissProt:Q8S9G6,SwissProt:Q9M6E2,SwissProt:Q9M6F0,TAIR:AT1G28680.1,TAIR:AT3G47170.1,TAIR:AT5G07080.1,TrEMBL:B9S966,TrEMBL:E1CFE2,TrEMBL:Q9FXS7;Derives_from=GSCOCT00013192001;Name=Cc01_g02660;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.3.1.162,PRODUCT:Putative Taxadien-5-alpha-ol O-acetyltransferase,CC_functional_completeness:complete,CC_gene:TAT;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013192001~ Putative Taxadien-5-alpha-ol O-acetyltransferase~ TAT~ complete;original_location=complement(join(56668..57491%2C55401..55935));owner=coffea | |
| 3087 chr1 manual_curation exon 5126747 5127582 . - . Parent=GSCOCT00013192001 | |
| 3088 chr1 manual_curation exon 5128315 5129364 . - . Parent=GSCOCT00013192001 | |
| 3089 chr1 manual_curation CDS 5127048 5127582 . - 2 Parent=GSCOCT00013192001 | |
| 3090 chr1 manual_curation CDS 5128315 5129138 . - 0 Parent=GSCOCT00013192001 | |
| 3091 chr1 manual_curation gene 5135105 5136887 . + . ID=GSCOCG00013194001;Name=Cc01_g02670 | |
| 3092 chr1 manual_curation mRNA 5135105 5136887 . + . ID=GSCOCT00013194001;Parent=GSCOCG00013194001;Name=Cc01_g02670 | |
| 3093 chr1 manual_curation polypeptide 5135105 5136639 . + . ID=GSCOCP00013194001;Dbxref=SwissProt:O04274,SwissProt:P51091,SwissProt:Q96323,TAIR:AT1G55290.1,TAIR:AT3G12900.1,TAIR:AT3G13610.1,TrEMBL:G9M9M0,TrEMBL:G9M9M1,TrEMBL:G9M9M2;Derives_from=GSCOCT00013194001;Name=Cc01_g02670;Ontology_term=CC_evidence_code:ISS,CC_EC_number:1.14.11.9,PRODUCT:Putative Leucoanthocyanidin dioxygenase,CC_functional_completeness:fragment,CC_gene:LDOX,CC_gene:ANS;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013194001~ Putative Leucoanthocyanidin dioxygenase~ LDOX~ fragment;original_location=join(63458..63960%2C64419..64593%2C64909..64992);owner=coffea | |
| 3094 chr1 manual_curation exon 5135105 5135607 . + . Parent=GSCOCT00013194001 | |
| 3095 chr1 manual_curation exon 5136066 5136240 . + . Parent=GSCOCT00013194001 | |
| 3096 chr1 manual_curation exon 5136556 5136887 . + . Parent=GSCOCT00013194001 | |
| 3097 chr1 manual_curation CDS 5135105 5135607 . + 0 Parent=GSCOCT00013194001 | |
| 3098 chr1 manual_curation CDS 5136066 5136240 . + 2 Parent=GSCOCT00013194001 | |
| 3099 chr1 manual_curation CDS 5136556 5136639 . + 0 Parent=GSCOCT00013194001 | |
| 3100 chr1 manual_curation gene 5142137 5143755 . + . ID=GSCOCG00013195001;Name=Cc01_g02680 | |
| 3101 chr1 manual_curation mRNA 5142137 5143755 . + . ID=GSCOCT00013195001;Parent=GSCOCG00013195001;Name=Cc01_g02680 | |
| 3102 chr1 manual_curation polypeptide 5142137 5143755 . + . ID=GSCOCP00013195001;Dbxref=InterPro:IPR005123,PFAM:PF03171,SwissProt:Q84MB3,SwissProt:Q9LTH7,SwissProt:Q9LTH8,TAIR:AT1G55290.1,TAIR:AT3G12900.1,TAIR:AT3G13610.1,TrEMBL:G9M9M0,TrEMBL:G9M9M1,TrEMBL:G9M9M2;Derives_from=GSCOCT00013195001;Name=Cc01_g02680;Ontology_term=CC_evidence_code:ISS,GO:0016491,CC_EC_number:1.14.11.9,PRODUCT:Putative 1-aminocyclopropane-1-carboxylate oxidase homolog 1,CC_functional_completeness:complete,CC_gene:At1g06620,CC_gene:At5g59540,CC_gene:At5g59530;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013195001~ Putative 1-aminocyclopropane-1-carboxylate oxidase homolog 1~ At1g06620~ complete;original_location=join(70490..70992%2C71535..72108);owner=coffea | |
| 3103 chr1 manual_curation exon 5142137 5142639 . + . Parent=GSCOCT00013195001 | |
| 3104 chr1 manual_curation exon 5143182 5143755 . + . Parent=GSCOCT00013195001 | |
| 3105 chr1 manual_curation CDS 5142137 5142639 . + 0 Parent=GSCOCT00013195001 | |
| 3106 chr1 manual_curation CDS 5143182 5143755 . + 2 Parent=GSCOCT00013195001 | |
| 3107 chr1 manual_curation gene 5221348 5222728 . - . ID=GSCOCG00013199001;Name=Cc01_g02690 | |
| 3108 chr1 manual_curation mRNA 5221348 5222728 . - . ID=GSCOCT00013199001;Parent=GSCOCG00013199001;Name=Cc01_g02690 | |
| 3109 chr1 manual_curation polypeptide 5221348 5222728 . - . ID=GSCOCP00013199001;Dbxref=InterPro:IPR005123,PFAM:PF03171,SwissProt:P10967,SwissProt:Q9LSW7,SwissProt:Q9LTH8,TAIR:AT1G55290.1,TAIR:AT3G13610.1,TAIR:AT5G12270.1,TrEMBL:G9M9M3,TrEMBL:G9M9M4,TrEMBL:G9M9M5;Derives_from=GSCOCT00013199001;Name=Cc01_g02690;Ontology_term=CC_evidence_code:ISS,GO:0016491,CC_EC_number:1.14.11.9,PRODUCT:Putative 1-aminocyclopropane-1-carboxylate oxidase homolog 9,CC_functional_completeness:complete,CC_gene:At5g43440,CC_gene:At5g59530,CC_gene:ACO3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013199001~ Putative 1-aminocyclopropane-1-carboxylate oxidase homolog 9~ At5g43440~ complete;original_location=complement(join(150618..151081%2C149701..150277));owner=coffea | |
| 3110 chr1 manual_curation exon 5221348 5221924 . - . Parent=GSCOCT00013199001 | |
| 3111 chr1 manual_curation exon 5222265 5222728 . - . Parent=GSCOCT00013199001 | |
| 3112 chr1 manual_curation CDS 5221348 5221924 . - 2 Parent=GSCOCT00013199001 | |
| 3113 chr1 manual_curation CDS 5222265 5222728 . - 0 Parent=GSCOCT00013199001 | |
| 3114 chr1 manual_curation gene 5227252 5230544 . - . ID=GSCOCG00013200001;Name=Cc01_g02700 | |
| 3115 chr1 manual_curation mRNA 5227252 5230544 . - . ID=GSCOCT00013200001;Parent=GSCOCG00013200001;Name=Cc01_g02700 | |
| 3116 chr1 manual_curation polypeptide 5227942 5230544 . - . ID=GSCOCP00013200001;Derives_from=GSCOCT00013200001;Name=Cc01_g02700;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013200001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(158864..158897%2C158729..158808%2C157042..157130%2C156295..156343));owner=coffea | |
| 3117 chr1 manual_curation exon 5227252 5227990 . - . Parent=GSCOCT00013200001 | |
| 3118 chr1 manual_curation exon 5228689 5228777 . - . Parent=GSCOCT00013200001 | |
| 3119 chr1 manual_curation exon 5230376 5230455 . - . Parent=GSCOCT00013200001 | |
| 3120 chr1 manual_curation exon 5230511 5230544 . - . Parent=GSCOCT00013200001 | |
| 3121 chr1 manual_curation CDS 5227942 5227990 . - 2 Parent=GSCOCT00013200001 | |
| 3122 chr1 manual_curation CDS 5228689 5228777 . - 0 Parent=GSCOCT00013200001 | |
| 3123 chr1 manual_curation CDS 5230376 5230455 . - 1 Parent=GSCOCT00013200001 | |
| 3124 chr1 manual_curation CDS 5230511 5230544 . - 0 Parent=GSCOCT00013200001 | |
| 3125 chr1 manual_curation gene 5234714 5239710 . + . ID=GSCOCG00013201001;Name=Cc01_g02710 | |
| 3126 chr1 manual_curation mRNA 5234714 5239710 . + . ID=GSCOCT00013201001;Parent=GSCOCG00013201001;Name=Cc01_g02710 | |
| 3127 chr1 manual_curation polypeptide 5235202 5239307 . + . ID=GSCOCP00013201001;Dbxref=InterPro:IPR007305,PFAM:PF04178,SwissProt:Q20263,SwissProt:Q2NKV8,SwissProt:Q9DCQ3,TAIR:AT3G03180.1,TAIR:AT3G49420.1,TAIR:AT5G01430.1,TrEMBL:B4FXX6,TrEMBL:B9HHD3,TrEMBL:B9MXZ3;Derives_from=GSCOCT00013201001;Name=Cc01_g02710;Ontology_term=CC_evidence_code:ISS,GO:0016192,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable Golgi transport protein 1,CC_functional_completeness:complete,CC_gene:F41C3.4,CC_gene:Golt1a,CC_gene:GOLT1A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013201001~ Putative Probable Golgi transport protein 1~ F41C3.4~ complete;original_location=join(163555..163585%2C165473..165564%2C165662..165742%2C165829..165926%2C166008..166089%2C167622..167660);owner=coffea | |
| 3128 chr1 manual_curation exon 5234714 5234958 . + . Parent=GSCOCT00013201001 | |
| 3129 chr1 manual_curation exon 5235129 5235232 . + . Parent=GSCOCT00013201001 | |
| 3130 chr1 manual_curation exon 5237120 5237211 . + . Parent=GSCOCT00013201001 | |
| 3131 chr1 manual_curation exon 5237309 5237389 . + . Parent=GSCOCT00013201001 | |
| 3132 chr1 manual_curation exon 5237476 5237573 . + . Parent=GSCOCT00013201001 | |
| 3133 chr1 manual_curation exon 5237655 5237736 . + . Parent=GSCOCT00013201001 | |
| 3134 chr1 manual_curation exon 5239269 5239710 . + . Parent=GSCOCT00013201001 | |
| 3135 chr1 manual_curation CDS 5235202 5235232 . + 0 Parent=GSCOCT00013201001 | |
| 3136 chr1 manual_curation CDS 5237120 5237211 . + 1 Parent=GSCOCT00013201001 | |
| 3137 chr1 manual_curation CDS 5237309 5237389 . + 0 Parent=GSCOCT00013201001 | |
| 3138 chr1 manual_curation CDS 5237476 5237573 . + 0 Parent=GSCOCT00013201001 | |
| 3139 chr1 manual_curation CDS 5237655 5237736 . + 2 Parent=GSCOCT00013201001 | |
| 3140 chr1 manual_curation CDS 5239269 5239307 . + 0 Parent=GSCOCT00013201001 | |
| 3141 chr1 manual_curation gene 5240453 5241276 . - . ID=GSCOCG00013202001;Name=Cc01_g02720 | |
| 3142 chr1 manual_curation mRNA 5240453 5241276 . - . ID=GSCOCT00013202001;Parent=GSCOCG00013202001;Name=Cc01_g02720 | |
| 3143 chr1 manual_curation polypeptide 5240453 5241276 . - . ID=GSCOCP00013202001;Dbxref=GENE3D:G3DSA:2.60.120.10,InterPro:IPR006045,InterPro:IPR011051,InterPro:IPR014710,PFAM:PF00190,SMART:SM00835,SUPERFAMILY:SSF51182,SwissProt:Q6K5P8,SwissProt:Q6K5Q0,SwissProt:Q9FID0,TAIR:AT5G38910.1,TAIR:AT5G39110.1,TAIR:AT5G39180.1,TrEMBL:A2X4Z8,TrEMBL:A5AWE5,TrEMBL:F6HIB9;Derives_from=GSCOCT00013202001;Name=Cc01_g02720;Ontology_term=CC_evidence_code:ISS,GO:0045735,CC_EC_number:1.15.1.1,PRODUCT:Putative germin-like protein 2-1,CC_functional_completeness:complete,CC_gene:Os02g0491600,CC_gene:Os02g0491800,CC_gene:At5g39110;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013202001~ Putative germin-like protein 2-1~ Os02g0491600~ complete;original_location=complement(join(169437..169629%2C168806..169134));owner=coffea | |
| 3144 chr1 manual_curation exon 5240453 5240781 . - . Parent=GSCOCT00013202001 | |
| 3145 chr1 manual_curation exon 5241084 5241276 . - . Parent=GSCOCT00013202001 | |
| 3146 chr1 manual_curation CDS 5240453 5240781 . - 1 Parent=GSCOCT00013202001 | |
| 3147 chr1 manual_curation CDS 5241084 5241276 . - 0 Parent=GSCOCT00013202001 | |
| 3148 chr1 manual_curation gene 5246216 5247296 . - . ID=GSCOCG00013203001;Name=Cc01_g02730 | |
| 3149 chr1 manual_curation mRNA 5246216 5247296 . - . ID=GSCOCT00013203001;Parent=GSCOCG00013203001;Name=Cc01_g02730 | |
| 3150 chr1 manual_curation polypeptide 5246216 5247296 . - . ID=GSCOCP00013203001;Dbxref=GENE3D:G3DSA:2.60.120.10,InterPro:IPR014710,SwissProt:Q6K5Q0,SwissProt:Q9FMA6,SwissProt:Q9M8X1,TAIR:AT3G04200.1,TAIR:AT3G05950.1,TAIR:AT5G38960.1,TrEMBL:B9N5Q6,TrEMBL:B9N5Q7,TrEMBL:F6HIB9;Derives_from=GSCOCT00013203001;Name=Cc01_g02730;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative germin-like protein 2-1,CC_functional_completeness:fragment,CC_gene:Os02g0491600,CC_gene:At3g04150,CC_gene:At5g38960;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013203001~ Putative germin-like protein 2-1~ Os02g0491600~ fragment;original_location=complement(join(175535..175649%2C174569..174846));owner=coffea | |
| 3151 chr1 manual_curation exon 5246216 5246493 . - . Parent=GSCOCT00013203001 | |
| 3152 chr1 manual_curation exon 5247182 5247296 . - . Parent=GSCOCT00013203001 | |
| 3153 chr1 manual_curation CDS 5246216 5246493 . - 1 Parent=GSCOCT00013203001 | |
| 3154 chr1 manual_curation CDS 5247182 5247296 . - 0 Parent=GSCOCT00013203001 | |
| 3155 chr1 manual_curation gene 5261218 5262789 . + . ID=GSCOCG00013204001;Name=Cc01_g02740 | |
| 3156 chr1 manual_curation mRNA 5261218 5262789 . + . ID=GSCOCT00013204001;Parent=GSCOCG00013204001;Name=Cc01_g02740 | |
| 3157 chr1 manual_curation polypeptide 5261218 5262789 . + . ID=GSCOCP00013204001;Dbxref=InterPro:IPR001841,InterPro:IPR002867,InterPro:IPR018957,PFAM:PF00097,PFAM:PF01485,PROFILE:PS50089,SMART:SM00647,SwissProt:Q84RR0,SwissProt:Q8L829,SwissProt:Q8W468,TAIR:AT1G05890.2,TAIR:AT1G65430.1,TAIR:AT2G31510.1,TrEMBL:B9HHY6,TrEMBL:B9HYH6,TrEMBL:I1LJR4;Derives_from=GSCOCT00013204001;Name=Cc01_g02740;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable E3 ubiquitin-protein ligase ARI8,CC_functional_completeness:complete,CC_gene:ARI8,CC_gene:ARI7,CC_gene:ARI5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013204001~ Putative Probable E3 ubiquitin-protein ligase ARI8~ ARI8~ complete;original_location=join(189571..190314%2C190540..191142);owner=coffea | |
| 3158 chr1 manual_curation exon 5261218 5261961 . + . Parent=GSCOCT00013204001 | |
| 3159 chr1 manual_curation exon 5262187 5262789 . + . Parent=GSCOCT00013204001 | |
| 3160 chr1 manual_curation CDS 5261218 5261961 . + 0 Parent=GSCOCT00013204001 | |
| 3161 chr1 manual_curation CDS 5262187 5262789 . + 0 Parent=GSCOCT00013204001 | |
| 3162 chr1 manual_curation gene 5318366 5320031 . - . ID=GSCOCG00013207001;Name=Cc01_g02750 | |
| 3163 chr1 manual_curation mRNA 5318366 5320031 . - . ID=GSCOCT00013207001;Parent=GSCOCG00013207001;Name=Cc01_g02750 | |
| 3164 chr1 manual_curation polypeptide 5318366 5320031 . - . ID=GSCOCP00013207001;Dbxref=GENE3D:G3DSA:2.60.210.10,GENE3D:G3DSA:3.90.890.10,InterPro:IPR001841,InterPro:IPR004162,InterPro:IPR008974,InterPro:IPR013010,InterPro:IPR013322,InterPro:IPR013323,InterPro:IPR018121,PANTHER:PTHR10315,PFAM:PF03145,PROFILE:PS50089,PROFILE:PS51081,SUPERFAMILY:SSF49599,SwissProt:Q84JL3,SwissProt:Q8S3N1,SwissProt:Q9M2P4,TAIR:AT2G41980.1,TAIR:AT3G58040.1,TAIR:AT3G61790.1,TrEMBL:A9NV72,TrEMBL:B9T806,TrEMBL:D7LVZ4;Derives_from=GSCOCT00013207001;Name=Cc01_g02750;Ontology_term=CC_evidence_code:ISS,GO:0004842,GO:0005515,GO:0005634,GO:0006511,GO:0007275,GO:0008270,GO:0016567,CC_EC_number:missing_EC_number,PRODUCT:E3 ubiquitin-protein ligase SINAT2,CC_functional_completeness:complete,CC_gene:SINAT2,CC_gene:SINAT5,CC_gene:SINAT3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013207001~ E3 ubiquitin-protein ligase SINAT2~ SINAT2~ complete;original_location=complement(join(248304..248384%2C247307..247690%2C246719..247042));owner=coffea | |
| 3165 chr1 manual_curation exon 5318366 5318689 . - . Parent=GSCOCT00013207001 | |
| 3166 chr1 manual_curation exon 5318954 5319337 . - . Parent=GSCOCT00013207001 | |
| 3167 chr1 manual_curation exon 5319951 5320031 . - . Parent=GSCOCT00013207001 | |
| 3168 chr1 manual_curation CDS 5318366 5318689 . - 0 Parent=GSCOCT00013207001 | |
| 3169 chr1 manual_curation CDS 5318954 5319337 . - 0 Parent=GSCOCT00013207001 | |
| 3170 chr1 manual_curation CDS 5319951 5320031 . - 0 Parent=GSCOCT00013207001 | |
| 3171 chr1 manual_curation gene 5338412 5349659 . - . ID=GSCOCG00013210001;Name=Cc01_g02760 | |
| 3172 chr1 manual_curation mRNA 5338412 5349659 . - . ID=GSCOCT00013210001;Parent=GSCOCG00013210001;Name=Cc01_g02760 | |
| 3173 chr1 manual_curation polypeptide 5338412 5349659 . - . ID=GSCOCP00013210001;Dbxref=InterPro:IPR001214,InterPro:IPR003616,InterPro:IPR006560,PFAM:PF00856,PROFILE:PS50280,PROFILE:PS50868,PROFILE:PS51215,SMART:SM00317,SMART:SM00570,SwissProt:Q945S8,SwissProt:Q949T8,SwissProt:Q9M1X9,TAIR:AT2G44150.1,TAIR:AT3G59960.1,TAIR:AT4G30860.1,TrEMBL:B9N8L1,TrEMBL:F6HE89,TrEMBL:I1MQB2;Derives_from=GSCOCT00013210001;Name=Cc01_g02760;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0018024,CC_EC_number:2.1.1.43,PRODUCT:Histone-lysine N-methyltransferase ASHH3,CC_functional_completeness:modules,CC_gene:ASHH3,CC_gene:ASHH4,CC_gene:ASHR3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013210001~ Histone-lysine N-methyltransferase ASHH3~ ASHH3~ modules;original_location=complement(join(277992..278012%2C277261..277404%2C276860..276941%2C275574..275635%2C272572..272701%2C272317..272428%2C270703..270802%2C270263..270341%2C269987..270158%2C269791..269871%2C269494..269671%2C268858..268885%2C268618..268702%2C266930..266978%2C266765..266830));owner=coffea | |
| 3174 chr1 manual_curation exon 5338412 5338477 . - . Parent=GSCOCT00013210001 | |
| 3175 chr1 manual_curation exon 5338577 5338625 . - . Parent=GSCOCT00013210001 | |
| 3176 chr1 manual_curation exon 5340265 5340349 . - . Parent=GSCOCT00013210001 | |
| 3177 chr1 manual_curation exon 5340505 5340532 . - . Parent=GSCOCT00013210001 | |
| 3178 chr1 manual_curation exon 5341141 5341318 . - . Parent=GSCOCT00013210001 | |
| 3179 chr1 manual_curation exon 5341438 5341518 . - . Parent=GSCOCT00013210001 | |
| 3180 chr1 manual_curation exon 5341634 5341805 . - . Parent=GSCOCT00013210001 | |
| 3181 chr1 manual_curation exon 5341910 5341988 . - . Parent=GSCOCT00013210001 | |
| 3182 chr1 manual_curation exon 5342350 5342449 . - . Parent=GSCOCT00013210001 | |
| 3183 chr1 manual_curation exon 5343964 5344075 . - . Parent=GSCOCT00013210001 | |
| 3184 chr1 manual_curation exon 5344219 5344348 . - . Parent=GSCOCT00013210001 | |
| 3185 chr1 manual_curation exon 5347221 5347282 . - . Parent=GSCOCT00013210001 | |
| 3186 chr1 manual_curation exon 5348507 5348588 . - . Parent=GSCOCT00013210001 | |
| 3187 chr1 manual_curation exon 5348908 5349051 . - . Parent=GSCOCT00013210001 | |
| 3188 chr1 manual_curation exon 5349639 5349659 . - . Parent=GSCOCT00013210001 | |
| 3189 chr1 manual_curation CDS 5338412 5338477 . - 0 Parent=GSCOCT00013210001 | |
| 3190 chr1 manual_curation CDS 5338577 5338625 . - 2 Parent=GSCOCT00013210001 | |
| 3191 chr1 manual_curation CDS 5340265 5340349 . - 1 Parent=GSCOCT00013210001 | |
| 3192 chr1 manual_curation CDS 5340505 5340532 . - 0 Parent=GSCOCT00013210001 | |
| 3193 chr1 manual_curation CDS 5341141 5341318 . - 2 Parent=GSCOCT00013210001 | |
| 3194 chr1 manual_curation CDS 5341438 5341518 . - 2 Parent=GSCOCT00013210001 | |
| 3195 chr1 manual_curation CDS 5341634 5341805 . - 1 Parent=GSCOCT00013210001 | |
| 3196 chr1 manual_curation CDS 5341910 5341988 . - 0 Parent=GSCOCT00013210001 | |
| 3197 chr1 manual_curation CDS 5342350 5342449 . - 2 Parent=GSCOCT00013210001 | |
| 3198 chr1 manual_curation CDS 5343964 5344075 . - 1 Parent=GSCOCT00013210001 | |
| 3199 chr1 manual_curation CDS 5344219 5344348 . - 0 Parent=GSCOCT00013210001 | |
| 3200 chr1 manual_curation CDS 5347221 5347282 . - 1 Parent=GSCOCT00013210001 | |
| 3201 chr1 manual_curation CDS 5348507 5348588 . - 0 Parent=GSCOCT00013210001 | |
| 3202 chr1 manual_curation CDS 5348908 5349051 . - 0 Parent=GSCOCT00013210001 | |
| 3203 chr1 manual_curation CDS 5349639 5349659 . - 0 Parent=GSCOCT00013210001 | |
| 3204 chr1 manual_curation gene 5375894 5382889 . + . ID=GSCOCG00013211001;Name=Cc01_g02770 | |
| 3205 chr1 manual_curation mRNA 5375894 5382889 . + . ID=GSCOCT00013211001;Parent=GSCOCG00013211001;Name=Cc01_g02770 | |
| 3206 chr1 manual_curation polypeptide 5376219 5382347 . + . ID=GSCOCP00013211001;Dbxref=HAMAP:MF_01543,InterPro:IPR000559,InterPro:IPR020628,PFAM:PF01268,PROSITE:PS00721,PROSITE:PS00722,SwissProt:P27653,SwissProt:P28723,SwissProt:Q9SPK5,TAIR:AT1G50480.1,TAIR:AT2G12200.1,TAIR:AT2G12280.1,TrEMBL:B9GLK3,TrEMBL:D7KG02,TrEMBL:F6GUF4;Derives_from=GSCOCT00013211001;Name=Cc01_g02770;Ontology_term=CC_evidence_code:ISS,GO:0004329,GO:0005524,GO:0009396,CC_EC_number:6.3.4.3,PRODUCT:Formate--tetrahydrofolate ligase,CC_functional_completeness:complete,CC_gene:THFS,CC_gene:Mthfd1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013211001~ Formate--tetrahydrofolate ligase~ THFS~ complete;original_location=join(304572..304727%2C305301..305450%2C305704..306879%2C309419..309565%2C310425..310700);owner=coffea | |
| 3207 chr1 manual_curation exon 5375894 5376374 . + . Parent=GSCOCT00013211001 | |
| 3208 chr1 manual_curation exon 5376948 5377097 . + . Parent=GSCOCT00013211001 | |
| 3209 chr1 manual_curation exon 5377351 5378526 . + . Parent=GSCOCT00013211001 | |
| 3210 chr1 manual_curation exon 5381066 5381212 . + . Parent=GSCOCT00013211001 | |
| 3211 chr1 manual_curation exon 5382072 5382889 . + . Parent=GSCOCT00013211001 | |
| 3212 chr1 manual_curation CDS 5376219 5376374 . + 0 Parent=GSCOCT00013211001 | |
| 3213 chr1 manual_curation CDS 5376948 5377097 . + 0 Parent=GSCOCT00013211001 | |
| 3214 chr1 manual_curation CDS 5377351 5378526 . + 0 Parent=GSCOCT00013211001 | |
| 3215 chr1 manual_curation CDS 5381066 5381212 . + 0 Parent=GSCOCT00013211001 | |
| 3216 chr1 manual_curation CDS 5382072 5382347 . + 0 Parent=GSCOCT00013211001 | |
| 3217 chr1 manual_curation gene 5383501 5385003 . - . ID=GSCOCG00013212001;Name=Cc01_g02780 | |
| 3218 chr1 manual_curation mRNA 5383501 5385003 . - . ID=GSCOCT00013212001;Parent=GSCOCG00013212001;Name=Cc01_g02780 | |
| 3219 chr1 manual_curation polypeptide 5383501 5385003 . - . ID=GSCOCP00013212001;Dbxref=InterPro:IPR000823,InterPro:IPR002016,InterPro:IPR010255,InterPro:IPR019793,InterPro:IPR019794,PFAM:PF00141,PRINTS:PR00458,PRINTS:PR00461,PROFILE:PS50873,PROSITE:PS00435,PROSITE:PS00436,SUPERFAMILY:SSF48113,SwissProt:Q39034,SwissProt:Q42517,SwissProt:Q9FG34,TAIR:AT5G06720.1,TAIR:AT5G06730.1,TAIR:AT5G19890.1,TrEMBL:B9GYK2,TrEMBL:C6TG60,TrEMBL:I1MSF0;Derives_from=GSCOCT00013212001;Name=Cc01_g02780;Ontology_term=CC_evidence_code:ISS,GO:0004601,GO:0006979,GO:0020037,GO:0055114,CC_EC_number:1.11.1.7,PRODUCT:Peroxidase N,CC_functional_completeness:complete,CC_gene:HRPN,CC_gene:PER59,CC_gene:PER54;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013212001~ Peroxidase N~ HRPN~ complete;original_location=complement(join(313141..313356%2C312862..313044%2C312538..312706%2C311854..312275));owner=coffea | |
| 3220 chr1 manual_curation exon 5383501 5383922 . - . Parent=GSCOCT00013212001 | |
| 3221 chr1 manual_curation exon 5384185 5384353 . - . Parent=GSCOCT00013212001 | |
| 3222 chr1 manual_curation exon 5384509 5384691 . - . Parent=GSCOCT00013212001 | |
| 3223 chr1 manual_curation exon 5384788 5385003 . - . Parent=GSCOCT00013212001 | |
| 3224 chr1 manual_curation CDS 5383501 5383922 . - 1 Parent=GSCOCT00013212001 | |
| 3225 chr1 manual_curation CDS 5384185 5384353 . - 0 Parent=GSCOCT00013212001 | |
| 3226 chr1 manual_curation CDS 5384509 5384691 . - 0 Parent=GSCOCT00013212001 | |
| 3227 chr1 manual_curation CDS 5384788 5385003 . - 0 Parent=GSCOCT00013212001 | |
| 3228 chr1 manual_curation gene 5389412 5390275 . + . ID=GSCOCG00013213001;Name=Cc01_g02790 | |
| 3229 chr1 manual_curation mRNA 5389412 5390275 . + . ID=GSCOCT00013213001;Parent=GSCOCG00013213001;Name=Cc01_g02790 | |
| 3230 chr1 manual_curation polypeptide 5389412 5390275 . + . ID=GSCOCP00013213001;Dbxref=InterPro:IPR004320,PFAM:PF03087,TAIR:AT2G17070.1,TAIR:AT2G17080.1,TAIR:AT4G35690.1,TrEMBL:B9SCA9,TrEMBL:B9SCB2,TrEMBL:B9T4T9;Derives_from=GSCOCT00013213001;Name=Cc01_g02790;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Arabidopsis protein of unknown function (DUF241),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013213001~ Putative Arabidopsis protein of unknown function (DUF241)~ unknown_gene~ complete;original_location=317765..318628;owner=coffea | |
| 3231 chr1 manual_curation exon 5389412 5390275 . + . Parent=GSCOCT00013213001 | |
| 3232 chr1 manual_curation CDS 5389412 5390275 . + 0 Parent=GSCOCT00013213001 | |
| 3233 chr1 manual_curation gene 5403718 5404569 . + . ID=GSCOCG00013215001;Name=Cc01_g02800 | |
| 3234 chr1 manual_curation mRNA 5403718 5404569 . + . ID=GSCOCT00013215001;Parent=GSCOCG00013215001;Name=Cc01_g02800 | |
| 3235 chr1 manual_curation polypeptide 5403718 5404569 . + . ID=GSCOCP00013215001;Dbxref=InterPro:IPR004320,PFAM:PF03087,TAIR:AT2G17070.1,TAIR:AT2G17080.1,TAIR:AT4G35690.1,TrEMBL:B9SCA9,TrEMBL:B9SCB2,TrEMBL:B9T4T9;Derives_from=GSCOCT00013215001;Name=Cc01_g02800;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Arabidopsis protein of unknown function (DUF241),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013215001~ Putative Arabidopsis protein of unknown function (DUF241)~ unknown_gene~ complete;original_location=332071..332922;owner=coffea | |
| 3236 chr1 manual_curation exon 5403718 5404569 . + . Parent=GSCOCT00013215001 | |
| 3237 chr1 manual_curation CDS 5403718 5404569 . + 0 Parent=GSCOCT00013215001 | |
| 3238 chr1 manual_curation gene 5428094 5430174 . + . ID=GSCOCG00013216001;Name=Cc01_g02810 | |
| 3239 chr1 manual_curation mRNA 5428094 5430174 . + . ID=GSCOCT00013216001;Parent=GSCOCG00013216001;Name=Cc01_g02810 | |
| 3240 chr1 manual_curation polypeptide 5428094 5430174 . + . ID=GSCOCP00013216001;Dbxref=InterPro:IPR000742,InterPro:IPR000858,InterPro:IPR001480,InterPro:IPR003609,InterPro:IPR013227,PFAM:PF00954,PFAM:PF01453,PFAM:PF08276,PROFILE:PS50026,PROFILE:PS50927,PROFILE:PS50948,SMART:SM00108,SMART:SM00473,SUPERFAMILY:SSF51110,SwissProt:Q9LPZ9,SwissProt:Q9SXB4,SwissProt:Q9SXB5,TAIR:AT1G11300.1,TAIR:AT1G11330.2,TAIR:AT1G11350.1,TrEMBL:A5BEK3,TrEMBL:A5BXZ3,TrEMBL:D7T5C7;Derives_from=GSCOCT00013216001;Name=Cc01_g02810;Ontology_term=CC_evidence_code:ISS,GO:0005529,GO:0048544,CC_EC_number:missing_EC_number,PRODUCT:Putative G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300,CC_functional_completeness:fragment,CC_gene:At1g11300,CC_gene:At1g11305,CC_gene:SD113;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013216001~ Putative G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300~ At1g11300~ fragment;original_location=join(356447..356884%2C357253..357439%2C357593..358090%2C358382..358527);owner=coffea | |
| 3241 chr1 manual_curation exon 5428094 5428531 . + . Parent=GSCOCT00013216001 | |
| 3242 chr1 manual_curation exon 5428900 5429086 . + . Parent=GSCOCT00013216001 | |
| 3243 chr1 manual_curation exon 5429240 5429737 . + . Parent=GSCOCT00013216001 | |
| 3244 chr1 manual_curation exon 5430029 5430174 . + . Parent=GSCOCT00013216001 | |
| 3245 chr1 manual_curation CDS 5428094 5428531 . + 0 Parent=GSCOCT00013216001 | |
| 3246 chr1 manual_curation CDS 5428900 5429086 . + 0 Parent=GSCOCT00013216001 | |
| 3247 chr1 manual_curation CDS 5429240 5429737 . + 1 Parent=GSCOCT00013216001 | |
| 3248 chr1 manual_curation CDS 5430029 5430174 . + 1 Parent=GSCOCT00013216001 | |
| 3249 chr1 manual_curation gene 5430281 5431121 . + . ID=GSCOCG00013217001;Name=Cc01_g02820 | |
| 3250 chr1 manual_curation mRNA 5430281 5431121 . + . ID=GSCOCT00013217001;Parent=GSCOCG00013217001;Name=Cc01_g02820 | |
| 3251 chr1 manual_curation polypeptide 5430281 5431121 . + . ID=GSCOCP00013217001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q9SXB4,SwissProt:Q9SXB5,SwissProt:Q9SXB8,TAIR:AT1G11300.1,TAIR:AT1G11330.2,TAIR:AT4G21390.1,TrEMBL:B9HYQ6,TrEMBL:D7T5C7,TrEMBL:I1KZ76;Derives_from=GSCOCT00013217001;Name=Cc01_g02820;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330,CC_functional_completeness:fragment,CC_gene:At1g11330,CC_gene:At1g11305,CC_gene:At1g11300;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013217001~ G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330~ At1g11330~ fragment;original_location=join(358634..358753%2C358835..359045%2C359236..359474);owner=coffea | |
| 3252 chr1 manual_curation exon 5430281 5430400 . + . Parent=GSCOCT00013217001 | |
| 3253 chr1 manual_curation exon 5430482 5430692 . + . Parent=GSCOCT00013217001 | |
| 3254 chr1 manual_curation exon 5430883 5431121 . + . Parent=GSCOCT00013217001 | |
| 3255 chr1 manual_curation CDS 5430281 5430400 . + 0 Parent=GSCOCT00013217001 | |
| 3256 chr1 manual_curation CDS 5430482 5430692 . + 0 Parent=GSCOCT00013217001 | |
| 3257 chr1 manual_curation CDS 5430883 5431121 . + 1 Parent=GSCOCT00013217001 | |
| 3258 chr1 manual_curation gene 5431238 5431758 . + . ID=GSCOCG00013218001;Name=Cc01_g02830 | |
| 3259 chr1 manual_curation mRNA 5431238 5431758 . + . ID=GSCOCT00013218001;Parent=GSCOCG00013218001;Name=Cc01_g02830 | |
| 3260 chr1 manual_curation polypeptide 5431238 5431758 . + . ID=GSCOCP00013218001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR011009,PFAM:PF07714,PROFILE:PS50011,SUPERFAMILY:SSF56112,SwissProt:O65468,SwissProt:Q9LPZ9,SwissProt:Q9SXB8,TAIR:AT1G11330.2,TAIR:AT1G11350.1,TAIR:AT4G23160.1,TrEMBL:A5BXZ2,TrEMBL:A5BXZ3,TrEMBL:E5D7E5;Derives_from=GSCOCT00013218001;Name=Cc01_g02830;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0005524,GO:0006468,CC_EC_number:missing_EC_number,PRODUCT:G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13,CC_functional_completeness:fragment,CC_gene:SD113,CC_gene:At1g11330,CC_gene:CRK8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013218001~ G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13~ SD113~ fragment;original_location=join(359591..359734%2C359839..360111);owner=coffea | |
| 3261 chr1 manual_curation exon 5431238 5431381 . + . Parent=GSCOCT00013218001 | |
| 3262 chr1 manual_curation exon 5431486 5431758 . + . Parent=GSCOCT00013218001 | |
| 3263 chr1 manual_curation CDS 5431238 5431381 . + 0 Parent=GSCOCT00013218001 | |
| 3264 chr1 manual_curation CDS 5431486 5431758 . + 0 Parent=GSCOCT00013218001 | |
| 3265 chr1 manual_curation gene 5450903 5457197 . + . ID=GSCOCG00013220001;Name=Cc01_g02840 | |
| 3266 chr1 manual_curation mRNA 5450903 5457197 . + . ID=GSCOCT00013220001;Parent=GSCOCG00013220001;Name=Cc01_g02840 | |
| 3267 chr1 manual_curation polypeptide 5451118 5456584 . + . ID=GSCOCP00013220001;Dbxref=InterPro:IPR006751,PFAM:PF04658,TAIR:AT1G55300.2,TrEMBL:B9DG24,TrEMBL:D7KM83,TrEMBL:Q9C8A0;Derives_from=GSCOCT00013220001;Name=Cc01_g02840;Ontology_term=CC_evidence_code:ISS,GO:0005669,GO:0006367,GO:0016251,CC_EC_number:missing_EC_number,PRODUCT:TBP-associated factor 7,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013220001~ TBP-associated factor 7~ unknown_gene~ fragment;original_location=join(379471..379588%2C384035..384045%2C384114..384167%2C384261..384380%2C384833..384937);owner=coffea | |
| 3268 chr1 manual_curation exon 5450903 5450936 . + . Parent=GSCOCT00013220001 | |
| 3269 chr1 manual_curation exon 5451116 5451235 . + . Parent=GSCOCT00013220001 | |
| 3270 chr1 manual_curation exon 5455682 5455692 . + . Parent=GSCOCT00013220001 | |
| 3271 chr1 manual_curation exon 5455761 5455814 . + . Parent=GSCOCT00013220001 | |
| 3272 chr1 manual_curation exon 5455908 5456027 . + . Parent=GSCOCT00013220001 | |
| 3273 chr1 manual_curation exon 5456480 5457197 . + . Parent=GSCOCT00013220001 | |
| 3274 chr1 manual_curation CDS 5451118 5451235 . + 0 Parent=GSCOCT00013220001 | |
| 3275 chr1 manual_curation CDS 5455682 5455692 . + 1 Parent=GSCOCT00013220001 | |
| 3276 chr1 manual_curation CDS 5455761 5455814 . + 0 Parent=GSCOCT00013220001 | |
| 3277 chr1 manual_curation CDS 5455908 5456027 . + 0 Parent=GSCOCT00013220001 | |
| 3278 chr1 manual_curation CDS 5456480 5456584 . + 0 Parent=GSCOCT00013220001 | |
| 3279 chr1 manual_curation gene 5469896 5471229 . - . ID=GSCOCG00013223001;Name=Cc01_g02850 | |
| 3280 chr1 manual_curation mRNA 5469896 5471229 . - . ID=GSCOCT00013223001;Parent=GSCOCG00013223001;Name=Cc01_g02850 | |
| 3281 chr1 manual_curation polypeptide 5469896 5471229 . - . ID=GSCOCP00013223001;Dbxref=InterPro:IPR000873,InterPro:IPR020845,PFAM:PF00501,PROSITE:PS00455,SwissProt:F4HUK6,SwissProt:Q9SEY5,SwissProt:Q9SFW5,TAIR:AT1G20560.1,TAIR:AT1G76290.1,TAIR:AT2G17650.1,TrEMBL:B9H5H2,TrEMBL:F6I6S6,TrEMBL:H9A1W1;Derives_from=GSCOCT00013223001;Name=Cc01_g02850;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,CC_EC_number:missing_EC_number,PRODUCT:Probable acyl-activating enzyme 1%2C peroxisomal,CC_functional_completeness:fragment,CC_gene:AAE1,CC_gene:AAE2,CC_gene:AEE21;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013223001~ Probable acyl-activating enzyme 1%2C peroxisomal~ AAE1~ fragment;original_location=complement(join(398817..399582%2C398249..398412));owner=coffea | |
| 3282 chr1 manual_curation exon 5469896 5470059 . - . Parent=GSCOCT00013223001 | |
| 3283 chr1 manual_curation exon 5470464 5471229 . - . Parent=GSCOCT00013223001 | |
| 3284 chr1 manual_curation CDS 5469896 5470059 . - 1 Parent=GSCOCT00013223001 | |
| 3285 chr1 manual_curation CDS 5470464 5471229 . - 0 Parent=GSCOCT00013223001 | |
| 3286 chr1 manual_curation gene 5481002 5481184 . - . ID=GSCOCG00013224001;Name=Cc01_g02860 | |
| 3287 chr1 manual_curation mRNA 5481002 5481184 . - . ID=GSCOCT00013224001;Parent=GSCOCG00013224001;Name=Cc01_g02860 | |
| 3288 chr1 manual_curation polypeptide 5481002 5481184 . - . ID=GSCOCP00013224001;Derives_from=GSCOCT00013224001;Name=Cc01_g02860;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013224001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(409355..409537);owner=coffea | |
| 3289 chr1 manual_curation exon 5481002 5481184 . - . Parent=GSCOCT00013224001 | |
| 3290 chr1 manual_curation CDS 5481002 5481184 . - 0 Parent=GSCOCT00013224001 | |
| 3291 chr1 manual_curation gene 5481508 5486688 . + . ID=GSCOCG00013225001;Name=Cc01_g02870 | |
| 3292 chr1 manual_curation mRNA 5481508 5486688 . + . ID=GSCOCT00013225001;Parent=GSCOCG00013225001;Name=Cc01_g02870 | |
| 3293 chr1 manual_curation polypeptide 5481508 5485621 . + . ID=GSCOCP00013225001;Dbxref=InterPro:IPR000767,InterPro:IPR001611,InterPro:IPR002182,PFAM:PF00560,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q7XA39,SwissProt:Q7XA40,SwissProt:Q7XBQ9,TAIR:AT1G59780.1,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TrEMBL:B9IBB8,TrEMBL:B9NBB7,TrEMBL:B9NBC0;Derives_from=GSCOCT00013225001;Name=Cc01_g02870;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance protein RGA3,CC_functional_completeness:complete,CC_gene:RGA3,CC_gene:RGA2,CC_gene:RGA4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013225001~ Putative disease resistance protein RGA3~ RGA3~ complete;original_location=join(409861..410203%2C410261..412279%2C412343..412624%2C412685..413202%2C413480..413518%2C413858..413974);owner=coffea | |
| 3294 chr1 manual_curation exon 5485847 5486042 . + . Parent=GSCOCT00013225001 | |
| 3295 chr1 manual_curation exon 5486166 5486688 . + . Parent=GSCOCT00013225001 | |
| 3296 chr1 manual_curation exon 5481508 5481850 . + . Parent=GSCOCT00013225001 | |
| 3297 chr1 manual_curation exon 5481908 5483926 . + . Parent=GSCOCT00013225001 | |
| 3298 chr1 manual_curation exon 5483990 5484271 . + . Parent=GSCOCT00013225001 | |
| 3299 chr1 manual_curation exon 5484332 5484849 . + . Parent=GSCOCT00013225001 | |
| 3300 chr1 manual_curation exon 5485127 5485165 . + . Parent=GSCOCT00013225001 | |
| 3301 chr1 manual_curation exon 5485505 5485671 . + . Parent=GSCOCT00013225001 | |
| 3302 chr1 manual_curation CDS 5481508 5481850 . + 0 Parent=GSCOCT00013225001 | |
| 3303 chr1 manual_curation CDS 5481908 5483926 . + 1 Parent=GSCOCT00013225001 | |
| 3304 chr1 manual_curation CDS 5483990 5484271 . + 1 Parent=GSCOCT00013225001 | |
| 3305 chr1 manual_curation CDS 5484332 5484849 . + 1 Parent=GSCOCT00013225001 | |
| 3306 chr1 manual_curation CDS 5485127 5485165 . + 0 Parent=GSCOCT00013225001 | |
| 3307 chr1 manual_curation CDS 5485505 5485621 . + 0 Parent=GSCOCT00013225001 | |
| 3308 chr1 manual_curation gene 5487118 5488530 . + . ID=GSCOCG00013226001;Name=Cc01_g02880 | |
| 3309 chr1 manual_curation mRNA 5487118 5488530 . + . ID=GSCOCT00013226001;Parent=GSCOCG00013226001;Name=Cc01_g02880 | |
| 3310 chr1 manual_curation polypeptide 5487220 5488156 . + . ID=GSCOCP00013226001;Derives_from=GSCOCT00013226001;Name=Cc01_g02880;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013226001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(415573..415580%2C415837..415937%2C416364..416509);owner=coffea | |
| 3311 chr1 manual_curation exon 5487118 5487227 . + . Parent=GSCOCT00013226001 | |
| 3312 chr1 manual_curation exon 5487484 5487584 . + . Parent=GSCOCT00013226001 | |
| 3313 chr1 manual_curation exon 5488011 5488530 . + . Parent=GSCOCT00013226001 | |
| 3314 chr1 manual_curation CDS 5487220 5487227 . + 0 Parent=GSCOCT00013226001 | |
| 3315 chr1 manual_curation CDS 5487484 5487584 . + 2 Parent=GSCOCT00013226001 | |
| 3316 chr1 manual_curation CDS 5488011 5488156 . + 1 Parent=GSCOCT00013226001 | |
| 3317 chr1 manual_curation gene 5489716 5491172 . - . ID=GSCOCG00013227001;Name=Cc01_g02890 | |
| 3318 chr1 manual_curation mRNA 5489716 5491172 . - . ID=GSCOCT00013227001;Parent=GSCOCG00013227001;Name=Cc01_g02890 | |
| 3319 chr1 manual_curation polypeptide 5489716 5491172 . - . ID=GSCOCP00013227001;Dbxref=InterPro:IPR005299,PFAM:PF03492,SwissProt:Q9AVK0,SwissProt:Q9AVK1,SwissProt:Q9AVL9,TAIR:AT1G19640.1,TAIR:AT3G11480.1,TAIR:AT5G04370.2,TrEMBL:E5Q8J7,TrEMBL:Q6US91,TrEMBL:Q8RVM1;Derives_from=GSCOCT00013227001;Name=Cc01_g02890;Ontology_term=CC_evidence_code:ISS,GO:0008168,CC_EC_number:2.1.1.141,PRODUCT:Putative Probable caffeine synthase 3,CC_functional_completeness:complete,CC_gene:CS3,CC_gene:CS4,CC_gene:XMT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013227001~ Putative Probable caffeine synthase 3~ CS3~ complete;original_location=complement(join(419457..419525%2C418926..419360%2C418542..418778%2C418069..418464));owner=coffea | |
| 3320 chr1 manual_curation exon 5489716 5490111 . - . Parent=GSCOCT00013227001 | |
| 3321 chr1 manual_curation exon 5490189 5490425 . - . Parent=GSCOCT00013227001 | |
| 3322 chr1 manual_curation exon 5490573 5491007 . - . Parent=GSCOCT00013227001 | |
| 3323 chr1 manual_curation exon 5491104 5491172 . - . Parent=GSCOCT00013227001 | |
| 3324 chr1 manual_curation CDS 5489716 5490111 . - 0 Parent=GSCOCT00013227001 | |
| 3325 chr1 manual_curation CDS 5490189 5490425 . - 0 Parent=GSCOCT00013227001 | |
| 3326 chr1 manual_curation CDS 5490573 5491007 . - 0 Parent=GSCOCT00013227001 | |
| 3327 chr1 manual_curation CDS 5491104 5491172 . - 0 Parent=GSCOCT00013227001 | |
| 3328 chr1 manual_curation gene 5500444 5501912 . - . ID=GSCOCG00013229001;Name=Cc01_g02900 | |
| 3329 chr1 manual_curation mRNA 5500444 5501912 . - . ID=GSCOCT00013229001;Parent=GSCOCG00013229001;Name=Cc01_g02900 | |
| 3330 chr1 manual_curation polypeptide 5500444 5501912 . - . ID=GSCOCP00013229001;Dbxref=InterPro:IPR005299,PFAM:PF03492,SwissProt:A4GE69,SwissProt:Q9AVK0,SwissProt:Q9AVL9,TAIR:AT3G11480.1,TAIR:AT3G21950.1,TAIR:AT5G04370.2,TrEMBL:E5Q8J7,TrEMBL:Q4U5S1,TrEMBL:Q8RVL9;Derives_from=GSCOCT00013229001;Name=Cc01_g02900;Ontology_term=CC_evidence_code:ISS,GO:0008168,CC_EC_number:2.1.1.141,PRODUCT:Putative Probable caffeine synthase 4,CC_functional_completeness:complete,CC_gene:CS4,CC_gene:XMT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013229001~ Putative Probable caffeine synthase 4~ CS4~ complete;original_location=complement(join(430197..430265%2C429689..430102%2C429240..429500%2C429031..429162%2C428797..428964));owner=coffea | |
| 3331 chr1 manual_curation exon 5500444 5500611 . - . Parent=GSCOCT00013229001 | |
| 3332 chr1 manual_curation exon 5500678 5500809 . - . Parent=GSCOCT00013229001 | |
| 3333 chr1 manual_curation exon 5500887 5501147 . - . Parent=GSCOCT00013229001 | |
| 3334 chr1 manual_curation exon 5501336 5501749 . - . Parent=GSCOCT00013229001 | |
| 3335 chr1 manual_curation exon 5501844 5501912 . - . Parent=GSCOCT00013229001 | |
| 3336 chr1 manual_curation CDS 5500444 5500611 . - 0 Parent=GSCOCT00013229001 | |
| 3337 chr1 manual_curation CDS 5500678 5500809 . - 0 Parent=GSCOCT00013229001 | |
| 3338 chr1 manual_curation CDS 5500887 5501147 . - 0 Parent=GSCOCT00013229001 | |
| 3339 chr1 manual_curation CDS 5501336 5501749 . - 0 Parent=GSCOCT00013229001 | |
| 3340 chr1 manual_curation CDS 5501844 5501912 . - 0 Parent=GSCOCT00013229001 | |
| 3341 chr1 manual_curation gene 5556045 5559451 . - . ID=GSCOCG00013230001;Name=Cc01_g02910 | |
| 3342 chr1 manual_curation mRNA 5556045 5559451 . - . ID=GSCOCT00013230001;Parent=GSCOCG00013230001;Name=Cc01_g02910 | |
| 3343 chr1 manual_curation polypeptide 5556045 5559451 . - . ID=GSCOCP00013230001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q7XA39,SwissProt:Q7XA40,SwissProt:Q7XBQ9,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TAIR:AT3G50950.2,TrEMBL:B9NBB7,TrEMBL:B9NBC0,TrEMBL:B9NED8;Derives_from=GSCOCT00013230001;Name=Cc01_g02910;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance protein RGA4,CC_functional_completeness:complete,CC_gene:RGA4,CC_gene:RGA3,CC_gene:RGA2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013230001~ Putative disease resistance protein RGA4~ RGA4~ complete;original_location=complement(join(486388..487804%2C485548..486354%2C485108..485496%2C484886..484970%2C484398..484774));owner=coffea | |
| 3344 chr1 manual_curation exon 5556045 5556421 . - . Parent=GSCOCT00013230001 | |
| 3345 chr1 manual_curation exon 5556533 5556617 . - . Parent=GSCOCT00013230001 | |
| 3346 chr1 manual_curation exon 5556755 5557143 . - . Parent=GSCOCT00013230001 | |
| 3347 chr1 manual_curation exon 5557195 5558001 . - . Parent=GSCOCT00013230001 | |
| 3348 chr1 manual_curation exon 5558035 5559451 . - . Parent=GSCOCT00013230001 | |
| 3349 chr1 manual_curation CDS 5556045 5556421 . - 1 Parent=GSCOCT00013230001 | |
| 3350 chr1 manual_curation CDS 5556533 5556617 . - 0 Parent=GSCOCT00013230001 | |
| 3351 chr1 manual_curation CDS 5556755 5557143 . - 1 Parent=GSCOCT00013230001 | |
| 3352 chr1 manual_curation CDS 5557195 5558001 . - 1 Parent=GSCOCT00013230001 | |
| 3353 chr1 manual_curation CDS 5558035 5559451 . - 0 Parent=GSCOCT00013230001 | |
| 3354 chr1 manual_curation gene 5562739 5562882 . - . ID=GSCOCG00013231001;Name=Cc01_g02920 | |
| 3355 chr1 manual_curation mRNA 5562739 5562882 . - . ID=GSCOCT00013231001;Parent=GSCOCG00013231001;Name=Cc01_g02920 | |
| 3356 chr1 manual_curation polypeptide 5562739 5562882 . - . ID=GSCOCP00013231001;Derives_from=GSCOCT00013231001;Name=Cc01_g02920;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013231001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(491092..491235);owner=coffea | |
| 3357 chr1 manual_curation exon 5562739 5562882 . - . Parent=GSCOCT00013231001 | |
| 3358 chr1 manual_curation CDS 5562739 5562882 . - 0 Parent=GSCOCT00013231001 | |
| 3359 chr1 manual_curation gene 5593730 5597890 . + . ID=GSCOCG00013234001;Name=Cc01_g02930 | |
| 3360 chr1 manual_curation mRNA 5593730 5597890 . + . ID=GSCOCT00013234001;Parent=GSCOCG00013234001;Name=Cc01_g02930 | |
| 3361 chr1 manual_curation polypeptide 5594946 5597619 . + . ID=GSCOCP00013234001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR003609,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR013227,InterPro:IPR020635,PFAM:PF07714,PFAM:PF08276,PROFILE:PS50011,PROFILE:PS50948,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SMART:SM00473,SUPERFAMILY:SSF56112,SwissProt:Q9LPZ9,SwissProt:Q9SXB4,SwissProt:Q9SXB8,TAIR:AT1G11300.1,TAIR:AT1G11330.2,TAIR:AT1G11350.1,TrEMBL:B9H1U5,TrEMBL:B9HYQ3,TrEMBL:D7T5C7;Derives_from=GSCOCT00013234001;Name=Cc01_g02930;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.10.2,PRODUCT:G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330,CC_functional_completeness:fragment,CC_gene:At1g11330,CC_gene:At1g11300,CC_gene:SD113;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013234001~ G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330~ At1g11330~ fragment;original_location=join(523299..523500%2C524244..524351%2C524427..524617%2C524700..524910%2C525097..525334%2C525419..525569%2C525673..525972);owner=coffea | |
| 3362 chr1 manual_curation exon 5593730 5595147 . + . Parent=GSCOCT00013234001 | |
| 3363 chr1 manual_curation exon 5595891 5595998 . + . Parent=GSCOCT00013234001 | |
| 3364 chr1 manual_curation exon 5596074 5596264 . + . Parent=GSCOCT00013234001 | |
| 3365 chr1 manual_curation exon 5596347 5596557 . + . Parent=GSCOCT00013234001 | |
| 3366 chr1 manual_curation exon 5596744 5596981 . + . Parent=GSCOCT00013234001 | |
| 3367 chr1 manual_curation exon 5597066 5597216 . + . Parent=GSCOCT00013234001 | |
| 3368 chr1 manual_curation exon 5597320 5597890 . + . Parent=GSCOCT00013234001 | |
| 3369 chr1 manual_curation CDS 5594946 5595147 . + 0 Parent=GSCOCT00013234001 | |
| 3370 chr1 manual_curation CDS 5595891 5595998 . + 1 Parent=GSCOCT00013234001 | |
| 3371 chr1 manual_curation CDS 5596074 5596264 . + 1 Parent=GSCOCT00013234001 | |
| 3372 chr1 manual_curation CDS 5596347 5596557 . + 0 Parent=GSCOCT00013234001 | |
| 3373 chr1 manual_curation CDS 5596744 5596981 . + 1 Parent=GSCOCT00013234001 | |
| 3374 chr1 manual_curation CDS 5597066 5597216 . + 2 Parent=GSCOCT00013234001 | |
| 3375 chr1 manual_curation CDS 5597320 5597619 . + 0 Parent=GSCOCT00013234001 | |
| 3376 chr1 manual_curation gene 5604386 5607873 . + . ID=GSCOCG00013235001;Name=Cc01_g02940 | |
| 3377 chr1 manual_curation mRNA 5604386 5607873 . + . ID=GSCOCT00013235001;Parent=GSCOCG00013235001;Name=Cc01_g02940 | |
| 3378 chr1 manual_curation polypeptide 5605165 5607660 . + . ID=GSCOCP00013235001;Dbxref=InterPro:IPR000719,InterPro:IPR000858,InterPro:IPR002290,InterPro:IPR003609,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR013227,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00954,PFAM:PF08276,PROFILE:PS50011,PROFILE:PS50948,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SMART:SM00473,SUPERFAMILY:SSF56112,SwissProt:Q9SXB4,SwissProt:Q9SXB5,SwissProt:Q9SXB8,TAIR:AT1G11300.1,TAIR:AT1G11330.2,TAIR:AT1G11350.1,TrEMBL:A5BH08,TrEMBL:B9H1U5,TrEMBL:D7T5C7;Derives_from=GSCOCT00013235001;Name=Cc01_g02940;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,GO:0048544,CC_EC_number:2.7.11.25,PRODUCT:G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330,CC_functional_completeness:fragment,CC_gene:At1g11330,CC_gene:At1g11300,CC_gene:At1g11305;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013235001~ G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330~ At1g11330~ fragment;original_location=join(533518..533998%2C534288..534395%2C534466..534656%2C534739..534949%2C535139..535376%2C535471..535621%2C535726..536013);owner=coffea | |
| 3379 chr1 manual_curation exon 5604386 5605645 . + . Parent=GSCOCT00013235001 | |
| 3380 chr1 manual_curation exon 5605935 5606042 . + . Parent=GSCOCT00013235001 | |
| 3381 chr1 manual_curation exon 5606113 5606303 . + . Parent=GSCOCT00013235001 | |
| 3382 chr1 manual_curation exon 5606386 5606596 . + . Parent=GSCOCT00013235001 | |
| 3383 chr1 manual_curation exon 5606786 5607023 . + . Parent=GSCOCT00013235001 | |
| 3384 chr1 manual_curation exon 5607118 5607268 . + . Parent=GSCOCT00013235001 | |
| 3385 chr1 manual_curation exon 5607373 5607873 . + . Parent=GSCOCT00013235001 | |
| 3386 chr1 manual_curation CDS 5605165 5605645 . + 0 Parent=GSCOCT00013235001 | |
| 3387 chr1 manual_curation CDS 5605935 5606042 . + 1 Parent=GSCOCT00013235001 | |
| 3388 chr1 manual_curation CDS 5606113 5606303 . + 1 Parent=GSCOCT00013235001 | |
| 3389 chr1 manual_curation CDS 5606386 5606596 . + 0 Parent=GSCOCT00013235001 | |
| 3390 chr1 manual_curation CDS 5606786 5607023 . + 1 Parent=GSCOCT00013235001 | |
| 3391 chr1 manual_curation CDS 5607118 5607268 . + 2 Parent=GSCOCT00013235001 | |
| 3392 chr1 manual_curation CDS 5607373 5607660 . + 0 Parent=GSCOCT00013235001 | |
| 3393 chr1 manual_curation gene 5686972 5689815 . + . ID=GSCOCG00013237001;Name=Cc01_g02950 | |
| 3394 chr1 manual_curation mRNA 5686972 5689815 . + . ID=GSCOCT00013237001;Parent=GSCOCG00013237001;Name=Cc01_g02950 | |
| 3395 chr1 manual_curation polypeptide 5686972 5689815 . + . ID=GSCOCP00013237001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR003609,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR013227,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF08276,PROFILE:PS50011,PROFILE:PS50948,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SMART:SM00473,SUPERFAMILY:SSF56112,SwissProt:Q9LPZ9,SwissProt:Q9SXB4,SwissProt:Q9SXB8,TAIR:AT1G11300.1,TAIR:AT1G11330.2,TAIR:AT1G11350.1,TrEMBL:A5BH08,TrEMBL:B9HYQ3,TrEMBL:D7T5C7;Derives_from=GSCOCT00013237001;Name=Cc01_g02950;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330,CC_functional_completeness:fragment,CC_gene:At1g11330,CC_gene:At1g11300,CC_gene:SD113;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013237001~ G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330~ At1g11330~ fragment;original_location=join(615325..615559%2C615899..616123%2C616412..616519%2C616592..616782%2C616864..617074%2C617268..617505%2C617614..617764%2C617869..618168);owner=coffea | |
| 3396 chr1 manual_curation exon 5686972 5687206 . + . Parent=GSCOCT00013237001 | |
| 3397 chr1 manual_curation exon 5687546 5687770 . + . Parent=GSCOCT00013237001 | |
| 3398 chr1 manual_curation exon 5688059 5688166 . + . Parent=GSCOCT00013237001 | |
| 3399 chr1 manual_curation exon 5688239 5688429 . + . Parent=GSCOCT00013237001 | |
| 3400 chr1 manual_curation exon 5688511 5688721 . + . Parent=GSCOCT00013237001 | |
| 3401 chr1 manual_curation exon 5688915 5689152 . + . Parent=GSCOCT00013237001 | |
| 3402 chr1 manual_curation exon 5689261 5689411 . + . Parent=GSCOCT00013237001 | |
| 3403 chr1 manual_curation exon 5689516 5689815 . + . Parent=GSCOCT00013237001 | |
| 3404 chr1 manual_curation CDS 5686972 5687206 . + 0 Parent=GSCOCT00013237001 | |
| 3405 chr1 manual_curation CDS 5687546 5687770 . + 1 Parent=GSCOCT00013237001 | |
| 3406 chr1 manual_curation CDS 5688059 5688166 . + 1 Parent=GSCOCT00013237001 | |
| 3407 chr1 manual_curation CDS 5688239 5688429 . + 1 Parent=GSCOCT00013237001 | |
| 3408 chr1 manual_curation CDS 5688511 5688721 . + 0 Parent=GSCOCT00013237001 | |
| 3409 chr1 manual_curation CDS 5688915 5689152 . + 1 Parent=GSCOCT00013237001 | |
| 3410 chr1 manual_curation CDS 5689261 5689411 . + 2 Parent=GSCOCT00013237001 | |
| 3411 chr1 manual_curation CDS 5689516 5689815 . + 0 Parent=GSCOCT00013237001 | |
| 3412 chr1 manual_curation gene 5693642 5694514 . + . ID=GSCOCG00013238001;Name=Cc01_g02960 | |
| 3413 chr1 manual_curation mRNA 5693642 5694514 . + . ID=GSCOCT00013238001;Parent=GSCOCG00013238001;Name=Cc01_g02960 | |
| 3414 chr1 manual_curation polypeptide 5693642 5694514 . + . ID=GSCOCP00013238001;Dbxref=InterPro:IPR004320,PFAM:PF03087,TAIR:AT2G17070.1,TAIR:AT2G17080.1,TAIR:AT4G35200.1,TrEMBL:B9SCA9,TrEMBL:B9SCB2,TrEMBL:B9T4T9;Derives_from=GSCOCT00013238001;Name=Cc01_g02960;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Arabidopsis protein of unknown function (DUF241),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013238001~ Putative Arabidopsis protein of unknown function (DUF241)~ unknown_gene~ complete;original_location=621995..622867;owner=coffea | |
| 3415 chr1 manual_curation exon 5693642 5694514 . + . Parent=GSCOCT00013238001 | |
| 3416 chr1 manual_curation CDS 5693642 5694514 . + 0 Parent=GSCOCT00013238001 | |
| 3417 chr1 manual_curation gene 5747891 5748399 . - . ID=GSCOCG00013241001;Name=Cc01_g02970 | |
| 3418 chr1 manual_curation mRNA 5747891 5748399 . - . ID=GSCOCT00013241001;Parent=GSCOCG00013241001;Name=Cc01_g02970 | |
| 3419 chr1 manual_curation polypeptide 5747891 5748399 . - . ID=GSCOCP00013241001;Dbxref=InterPro:IPR001023,InterPro:IPR013126,PANTHER:PTHR19375,PFAM:PF00012,SwissProt:A9N8H2,SwissProt:O87712,SwissProt:P19208,TAIR:AT1G09080.1,TAIR:AT5G02490.1,TAIR:AT5G28540.1,TrEMBL:B9I7J3,TrEMBL:F6I4L5,TrEMBL:H9BFL0;Derives_from=GSCOCT00013241001;Name=Cc01_g02970;Ontology_term=CC_evidence_code:ISS,GO:0005524,CC_EC_number:missing_EC_number,PRODUCT:Heat shock protein 70 (Hsp 70) family protein,CC_functional_completeness:fragment,CC_gene:hsp-3,CC_gene:dnaK;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013241001~ Heat shock protein 70 (Hsp 70) family protein~ hsp-3~ fragment;original_location=complement(join(676744..676752%2C676563..676630%2C676244..676346));owner=coffea | |
| 3420 chr1 manual_curation exon 5747891 5747993 . - . Parent=GSCOCT00013241001 | |
| 3421 chr1 manual_curation exon 5748210 5748277 . - . Parent=GSCOCT00013241001 | |
| 3422 chr1 manual_curation exon 5748391 5748399 . - . Parent=GSCOCT00013241001 | |
| 3423 chr1 manual_curation CDS 5747891 5747993 . - 2 Parent=GSCOCT00013241001 | |
| 3424 chr1 manual_curation CDS 5748210 5748277 . - 0 Parent=GSCOCT00013241001 | |
| 3425 chr1 manual_curation CDS 5748391 5748399 . - 0 Parent=GSCOCT00013241001 | |
| 3426 chr1 manual_curation gene 5795777 5801788 . + . ID=GSCOCG00019061001;Name=Cc01_g02980 | |
| 3427 chr1 manual_curation mRNA 5795777 5801788 . + . ID=GSCOCT00019061001;Parent=GSCOCG00019061001;Name=Cc01_g02980 | |
| 3428 chr1 manual_curation polypeptide 5797429 5801555 . + . ID=GSCOCP00019061001;Dbxref=TAIR:AT3G11720.3,TAIR:AT5G06440.4,TrEMBL:B9SDL8,TrEMBL:F6I3P7,TrEMBL:I1JGF5;Derives_from=GSCOCT00019061001;Name=Cc01_g02980;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative FUNCTIONS IN,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019061001~ Putative FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: mitochondrion%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 12 growth stages%3B BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT3G11720.3).~ unknown_gene~ modules;original_location=complement(join(1048983..1049121%2C1048754..1048881%2C1048557..1048665%2C1048390..1048429%2C1047525..1047614%2C1047338..1047437%2C1047089..1047228%2C1046531..1046633%2C1045393..1046072%2C1044995..1045277));owner=coffea | |
| 3429 chr1 manual_curation exon 5795777 5795853 . + . Parent=GSCOCT00019061001 | |
| 3430 chr1 manual_curation exon 5801273 5801788 . + . Parent=GSCOCT00019061001 | |
| 3431 chr1 manual_curation exon 5800478 5801157 . + . Parent=GSCOCT00019061001 | |
| 3432 chr1 manual_curation exon 5799917 5800019 . + . Parent=GSCOCT00019061001 | |
| 3433 chr1 manual_curation exon 5799322 5799461 . + . Parent=GSCOCT00019061001 | |
| 3434 chr1 manual_curation exon 5799113 5799212 . + . Parent=GSCOCT00019061001 | |
| 3435 chr1 manual_curation exon 5798936 5799025 . + . Parent=GSCOCT00019061001 | |
| 3436 chr1 manual_curation exon 5798121 5798160 . + . Parent=GSCOCT00019061001 | |
| 3437 chr1 manual_curation exon 5797885 5797993 . + . Parent=GSCOCT00019061001 | |
| 3438 chr1 manual_curation exon 5797669 5797796 . + . Parent=GSCOCT00019061001 | |
| 3439 chr1 manual_curation exon 5797389 5797567 . + . Parent=GSCOCT00019061001 | |
| 3440 chr1 manual_curation CDS 5801273 5801555 . + 2 Parent=GSCOCT00019061001 | |
| 3441 chr1 manual_curation CDS 5800478 5801157 . + 0 Parent=GSCOCT00019061001 | |
| 3442 chr1 manual_curation CDS 5799917 5800019 . + 2 Parent=GSCOCT00019061001 | |
| 3443 chr1 manual_curation CDS 5799322 5799461 . + 0 Parent=GSCOCT00019061001 | |
| 3444 chr1 manual_curation CDS 5799113 5799212 . + 2 Parent=GSCOCT00019061001 | |
| 3445 chr1 manual_curation CDS 5798936 5799025 . + 2 Parent=GSCOCT00019061001 | |
| 3446 chr1 manual_curation CDS 5798121 5798160 . + 1 Parent=GSCOCT00019061001 | |
| 3447 chr1 manual_curation CDS 5797885 5797993 . + 0 Parent=GSCOCT00019061001 | |
| 3448 chr1 manual_curation CDS 5797669 5797796 . + 1 Parent=GSCOCT00019061001 | |
| 3449 chr1 manual_curation CDS 5797429 5797567 . + 0 Parent=GSCOCT00019061001 | |
| 3450 chr1 manual_curation gene 5891855 5893297 . + . ID=GSCOCG00019058001;Name=Cc01_g02990 | |
| 3451 chr1 manual_curation mRNA 5891855 5893297 . + . ID=GSCOCT00019058001;Parent=GSCOCG00019058001;Name=Cc01_g02990 | |
| 3452 chr1 manual_curation polypeptide 5891855 5893297 . + . ID=GSCOCP00019058001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,PROSITE:PS00375,SwissProt:Q2V6K0,SwissProt:Q66PF3,SwissProt:Q9LSY8,TAIR:AT3G21750.1,TAIR:AT3G21760.1,TAIR:AT3G21780.1,TrEMBL:A7M6K3,TrEMBL:F8WKX0,TrEMBL:Q94IF2;Derives_from=GSCOCT00019058001;Name=Cc01_g02990;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:UDP-glucose flavonoid 3-O-glucosyltransferase 6,CC_functional_completeness:complete,CC_gene:GT6,CC_gene:GT3,CC_gene:UGT71B2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019058001~ UDP-glucose flavonoid 3-O-glucosyltransferase 6~ GT6~ complete;original_location=complement(953253..954695);owner=coffea | |
| 3453 chr1 manual_curation exon 5891855 5893297 . + . Parent=GSCOCT00019058001 | |
| 3454 chr1 manual_curation CDS 5891855 5893297 . + 0 Parent=GSCOCT00019058001 | |
| 3455 chr1 manual_curation gene 6003479 6016594 . + . ID=GSCOCG00019057001;Name=Cc01_g03000 | |
| 3456 chr1 manual_curation mRNA 6003479 6016594 . + . ID=GSCOCT00019057001;Parent=GSCOCG00019057001;Name=Cc01_g03000 | |
| 3457 chr1 manual_curation polypeptide 6003479 6016594 . + . ID=GSCOCP00019057001;Dbxref=SwissProt:Q0WP01,SwissProt:Q9SK96,SwissProt:Q9SK99,TAIR:AT1G22540.1,TAIR:AT1G22550.1,TAIR:AT1G22570.1,TrEMBL:B9IQF2,TrEMBL:B9PD62,TrEMBL:G7IYA9;Derives_from=GSCOCT00019057001;Name=Cc01_g03000;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Probable peptide/nitrate transporter At1g22540,CC_functional_completeness:fragment,CC_gene:At1g22550,CC_gene:At1g22570,CC_gene:At1g22540;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019057001~ Probable peptide/nitrate transporter At1g22540~ At1g22550~ fragment;original_location=complement(join(843011..843071%2C842558..842823%2C842251..842281%2C829956..830002));owner=coffea | |
| 3458 chr1 manual_curation exon 6016548 6016594 . + . Parent=GSCOCT00019057001 | |
| 3459 chr1 manual_curation exon 6004269 6004299 . + . Parent=GSCOCT00019057001 | |
| 3460 chr1 manual_curation exon 6003727 6003992 . + . Parent=GSCOCT00019057001 | |
| 3461 chr1 manual_curation exon 6003479 6003539 . + . Parent=GSCOCT00019057001 | |
| 3462 chr1 manual_curation CDS 6016548 6016594 . + 1 Parent=GSCOCT00019057001 | |
| 3463 chr1 manual_curation CDS 6004269 6004299 . + 0 Parent=GSCOCT00019057001 | |
| 3464 chr1 manual_curation CDS 6003727 6003992 . + 1 Parent=GSCOCT00019057001 | |
| 3465 chr1 manual_curation CDS 6003479 6003539 . + 0 Parent=GSCOCT00019057001 | |
| 3466 chr1 manual_curation gene 6149577 6153343 . - . ID=GSCOCG00019055001;Name=Cc01_g03010 | |
| 3467 chr1 manual_curation mRNA 6149577 6153343 . - . ID=GSCOCT00019055001;Parent=GSCOCG00019055001;Name=Cc01_g03010 | |
| 3468 chr1 manual_curation polypeptide 6149577 6153343 . - . ID=GSCOCP00019055001;Dbxref=InterPro:IPR000767,InterPro:IPR001611,InterPro:IPR002182,InterPro:IPR003591,PFAM:PF00560,PFAM:PF00931,PRINTS:PR00364,SMART:SM00369,SwissProt:O81825,SwissProt:O82484,SwissProt:P60838,TAIR:AT1G12280.1,TAIR:AT4G10780.1,TAIR:AT4G27220.1,TrEMBL:B9INX4,TrEMBL:B9IP02,TrEMBL:B9NEZ3;Derives_from=GSCOCT00019055001;Name=Cc01_g03010;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative BED finger-nbs resistance protein,CC_functional_completeness:complete,CC_gene:At4g27220,CC_gene:At4g10780,CC_gene:At1g12280;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019055001~ Putative BED finger-nbs resistance protein~ At4g27220~ complete;original_location=join(693207..694442%2C694509..695505%2C695886..695905%2C695975..696973);owner=coffea | |
| 3469 chr1 manual_curation exon 6152108 6153343 . - . Parent=GSCOCT00019055001 | |
| 3470 chr1 manual_curation exon 6151045 6152041 . - . Parent=GSCOCT00019055001 | |
| 3471 chr1 manual_curation exon 6150645 6150664 . - . Parent=GSCOCT00019055001 | |
| 3472 chr1 manual_curation exon 6149577 6150575 . - . Parent=GSCOCT00019055001 | |
| 3473 chr1 manual_curation CDS 6152108 6153343 . - 0 Parent=GSCOCT00019055001 | |
| 3474 chr1 manual_curation CDS 6151045 6152041 . - 0 Parent=GSCOCT00019055001 | |
| 3475 chr1 manual_curation CDS 6150645 6150664 . - 1 Parent=GSCOCT00019055001 | |
| 3476 chr1 manual_curation CDS 6149577 6150575 . - 0 Parent=GSCOCT00019055001 | |
| 3477 chr1 manual_curation gene 6161308 6163902 . - . ID=GSCOCG00019054001;Name=Cc01_g03020 | |
| 3478 chr1 manual_curation mRNA 6161308 6163902 . - . ID=GSCOCT00019054001;Parent=GSCOCG00019054001;Name=Cc01_g03020 | |
| 3479 chr1 manual_curation polypeptide 6161308 6163902 . - . ID=GSCOCP00019054001;Dbxref=InterPro:IPR000767,InterPro:IPR001611,InterPro:IPR002182,InterPro:IPR003593,PFAM:PF00560,PFAM:PF00931,PRINTS:PR00364,SMART:SM00382,SwissProt:O81825,SwissProt:O82484,SwissProt:P60838,TAIR:AT1G12280.1,TAIR:AT4G27190.1,TAIR:AT4G27220.1,TrEMBL:B9HZZ4,TrEMBL:B9N1L5,TrEMBL:B9N9S8;Derives_from=GSCOCT00019054001;Name=Cc01_g03020;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005515,GO:0005524,GO:0006915,GO:0006952,GO:0017111,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable disease resistance protein At1g12280,CC_functional_completeness:complete,CC_gene:At1g12280,CC_gene:At4g27220,CC_gene:At4g10780;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019054001~ Putative Probable disease resistance protein At1g12280~ At1g12280~ complete;original_location=join(682648..684208%2C684308..684568%2C684722..685242);owner=coffea | |
| 3480 chr1 manual_curation exon 6162342 6163902 . - . Parent=GSCOCT00019054001 | |
| 3481 chr1 manual_curation exon 6161982 6162242 . - . Parent=GSCOCT00019054001 | |
| 3482 chr1 manual_curation exon 6161308 6161828 . - . Parent=GSCOCT00019054001 | |
| 3483 chr1 manual_curation CDS 6162342 6163902 . - 0 Parent=GSCOCT00019054001 | |
| 3484 chr1 manual_curation CDS 6161982 6162242 . - 1 Parent=GSCOCT00019054001 | |
| 3485 chr1 manual_curation CDS 6161308 6161828 . - 1 Parent=GSCOCT00019054001 | |
| 3486 chr1 manual_curation gene 6188251 6192453 . + . ID=GSCOCG00019052001;Name=Cc01_g03030 | |
| 3487 chr1 manual_curation mRNA 6188251 6192453 . + . ID=GSCOCT00019052001;Parent=GSCOCG00019052001;Name=Cc01_g03030 | |
| 3488 chr1 manual_curation polypeptide 6188405 6192453 . + . ID=GSCOCP00019052001;Dbxref=TAIR:AT3G11720.3,TAIR:AT5G06440.4,TrEMBL:B9SDL8,TrEMBL:F6I3P7,TrEMBL:I1JGF5;Derives_from=GSCOCT00019052001;Name=Cc01_g03030;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative FUNCTIONS IN,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019052001~ Putative FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: mitochondrion%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 12 growth stages%3B BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT3G11720.3).~ unknown_gene~ modules;original_location=complement(join(658010..658145%2C657776..657903%2C657576..657684%2C657409..657448%2C656542..656631%2C656355..656454%2C656107..656246%2C655556..655658%2C654457..655121%2C654097..654379));owner=coffea | |
| 3489 chr1 manual_curation exon 6192171 6192453 . + . Parent=GSCOCT00019052001 | |
| 3490 chr1 manual_curation exon 6191429 6192093 . + . Parent=GSCOCT00019052001 | |
| 3491 chr1 manual_curation exon 6190892 6190994 . + . Parent=GSCOCT00019052001 | |
| 3492 chr1 manual_curation exon 6190304 6190443 . + . Parent=GSCOCT00019052001 | |
| 3493 chr1 manual_curation exon 6190096 6190195 . + . Parent=GSCOCT00019052001 | |
| 3494 chr1 manual_curation exon 6189919 6190008 . + . Parent=GSCOCT00019052001 | |
| 3495 chr1 manual_curation exon 6189102 6189141 . + . Parent=GSCOCT00019052001 | |
| 3496 chr1 manual_curation exon 6188866 6188974 . + . Parent=GSCOCT00019052001 | |
| 3497 chr1 manual_curation exon 6188647 6188774 . + . Parent=GSCOCT00019052001 | |
| 3498 chr1 manual_curation exon 6188251 6188540 . + . Parent=GSCOCT00019052001 | |
| 3499 chr1 manual_curation CDS 6192171 6192453 . + 2 Parent=GSCOCT00019052001 | |
| 3500 chr1 manual_curation CDS 6191429 6192093 . + 0 Parent=GSCOCT00019052001 | |
| 3501 chr1 manual_curation CDS 6190892 6190994 . + 2 Parent=GSCOCT00019052001 | |
| 3502 chr1 manual_curation CDS 6190304 6190443 . + 0 Parent=GSCOCT00019052001 | |
| 3503 chr1 manual_curation CDS 6190096 6190195 . + 2 Parent=GSCOCT00019052001 | |
| 3504 chr1 manual_curation CDS 6189919 6190008 . + 2 Parent=GSCOCT00019052001 | |
| 3505 chr1 manual_curation CDS 6189102 6189141 . + 1 Parent=GSCOCT00019052001 | |
| 3506 chr1 manual_curation CDS 6188866 6188974 . + 0 Parent=GSCOCT00019052001 | |
| 3507 chr1 manual_curation CDS 6188647 6188774 . + 1 Parent=GSCOCT00019052001 | |
| 3508 chr1 manual_curation CDS 6188405 6188540 . + 0 Parent=GSCOCT00019052001 | |
| 3509 chr1 manual_curation gene 6253396 6255268 . - . ID=GSCOCG00019050001;Name=Cc01_g03040 | |
| 3510 chr1 manual_curation mRNA 6253396 6255268 . - . ID=GSCOCT00019050001;Parent=GSCOCG00019050001;Name=Cc01_g03040 | |
| 3511 chr1 manual_curation polypeptide 6253660 6255195 . - . ID=GSCOCP00019050001;Dbxref=InterPro:IPR004263,PFAM:PF03016,SwissProt:Q7XJ98,SwissProt:Q8H038,TAIR:AT1G68470.1,TAIR:AT2G29040.1,TAIR:AT5G62220.1,TrEMBL:B9I4I7,TrEMBL:B9R9L8,TrEMBL:F6HAJ1;Derives_from=GSCOCT00019050001;Name=Cc01_g03040;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative Xyloglucan galactosyltransferase KATAMARI1 homolog,CC_functional_completeness:fragment,CC_gene:Os03g0144800,CC_gene:KAM1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019050001~ Putative Xyloglucan galactosyltransferase KATAMARI1 homolog~ Os03g0144800~ fragment;original_location=591355..592890;owner=coffea | |
| 3512 chr1 manual_curation exon 6253396 6255268 . - . Parent=GSCOCT00019050001 | |
| 3513 chr1 manual_curation CDS 6253660 6255195 . - 0 Parent=GSCOCT00019050001 | |
| 3514 chr1 manual_curation gene 6288053 6291310 . + . ID=GSCOCG00019046001;Name=Cc01_g03050 | |
| 3515 chr1 manual_curation mRNA 6288053 6291310 . + . ID=GSCOCT00019046001;Parent=GSCOCG00019046001;Name=Cc01_g03050 | |
| 3516 chr1 manual_curation polypeptide 6288053 6291310 . + . ID=GSCOCP00019046001;Dbxref=GENE3D:G3DSA:3.40.50.200,InterPro:IPR000209,InterPro:IPR003137,InterPro:IPR010259,InterPro:IPR015500,InterPro:IPR022398,PANTHER:PTHR10795,PFAM:PF00082,PFAM:PF02225,PFAM:PF05922,PRINTS:PR00723,PROSITE:PS00138,SUPERFAMILY:SSF52743,SwissProt:O64495,SwissProt:O65351,SwissProt:Q9LLL8,TAIR:AT1G20150.1,TAIR:AT1G20160.1,TAIR:AT5G51750.1,TrEMBL:B9H514,TrEMBL:E0CQB3,TrEMBL:Q9LNU1;Derives_from=GSCOCT00019046001;Name=Cc01_g03050;Ontology_term=CC_evidence_code:ISS,GO:0004252,GO:0006508,GO:0042802,GO:0043086,CC_EC_number:3.4.21.25,PRODUCT:Putative Subtilisin-like protease,CC_functional_completeness:complete,CC_gene:ARA12,CC_gene:SDD1,CC_gene:XSP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019046001~ Putative Subtilisin-like protease~ ARA12~ complete;original_location=complement(join(558325..558497%2C558080..558203%2C557938..558037%2C557651..557762%2C557398..557561%2C557049..557239%2C556760..556863%2C556522..556678%2C556365..556392%2C556187..556269%2C555895..556087%2C555644..555805%2C555240..555562));owner=coffea | |
| 3517 chr1 manual_curation exon 6290988 6291310 . + . Parent=GSCOCT00019046001 | |
| 3518 chr1 manual_curation exon 6290745 6290906 . + . Parent=GSCOCT00019046001 | |
| 3519 chr1 manual_curation exon 6290463 6290655 . + . Parent=GSCOCT00019046001 | |
| 3520 chr1 manual_curation exon 6290281 6290363 . + . Parent=GSCOCT00019046001 | |
| 3521 chr1 manual_curation exon 6290158 6290185 . + . Parent=GSCOCT00019046001 | |
| 3522 chr1 manual_curation exon 6289872 6290028 . + . Parent=GSCOCT00019046001 | |
| 3523 chr1 manual_curation exon 6289687 6289790 . + . Parent=GSCOCT00019046001 | |
| 3524 chr1 manual_curation exon 6289311 6289501 . + . Parent=GSCOCT00019046001 | |
| 3525 chr1 manual_curation exon 6288989 6289152 . + . Parent=GSCOCT00019046001 | |
| 3526 chr1 manual_curation exon 6288788 6288899 . + . Parent=GSCOCT00019046001 | |
| 3527 chr1 manual_curation exon 6288513 6288612 . + . Parent=GSCOCT00019046001 | |
| 3528 chr1 manual_curation exon 6288347 6288470 . + . Parent=GSCOCT00019046001 | |
| 3529 chr1 manual_curation exon 6288053 6288225 . + . Parent=GSCOCT00019046001 | |
| 3530 chr1 manual_curation CDS 6290988 6291310 . + 1 Parent=GSCOCT00019046001 | |
| 3531 chr1 manual_curation CDS 6290745 6290906 . + 1 Parent=GSCOCT00019046001 | |
| 3532 chr1 manual_curation CDS 6290463 6290655 . + 0 Parent=GSCOCT00019046001 | |
| 3533 chr1 manual_curation CDS 6290281 6290363 . + 1 Parent=GSCOCT00019046001 | |
| 3534 chr1 manual_curation CDS 6290158 6290185 . + 0 Parent=GSCOCT00019046001 | |
| 3535 chr1 manual_curation CDS 6289872 6290028 . + 2 Parent=GSCOCT00019046001 | |
| 3536 chr1 manual_curation CDS 6289687 6289790 . + 0 Parent=GSCOCT00019046001 | |
| 3537 chr1 manual_curation CDS 6289311 6289501 . + 1 Parent=GSCOCT00019046001 | |
| 3538 chr1 manual_curation CDS 6288989 6289152 . + 2 Parent=GSCOCT00019046001 | |
| 3539 chr1 manual_curation CDS 6288788 6288899 . + 1 Parent=GSCOCT00019046001 | |
| 3540 chr1 manual_curation CDS 6288513 6288612 . + 0 Parent=GSCOCT00019046001 | |
| 3541 chr1 manual_curation CDS 6288347 6288470 . + 2 Parent=GSCOCT00019046001 | |
| 3542 chr1 manual_curation CDS 6288053 6288225 . + 0 Parent=GSCOCT00019046001 | |
| 3543 chr1 manual_curation gene 6411437 6416216 . - . ID=GSCOCG00019041001;Name=Cc01_g03060 | |
| 3544 chr1 manual_curation mRNA 6411437 6416216 . - . ID=GSCOCT00019041001;Parent=GSCOCG00019041001;Name=Cc01_g03060 | |
| 3545 chr1 manual_curation polypeptide 6414636 6416216 . - . ID=GSCOCP00019041001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:O64705,SwissProt:P0C899,SwissProt:Q3E6Q1,TAIR:AT1G11290.1,TAIR:AT2G34400.1,TAIR:AT3G49142.1,TIGRFAMs:TIGR00756,TrEMBL:A5C7H1,TrEMBL:B9GMA8,TrEMBL:I1JDA6;Derives_from=GSCOCT00019041001;Name=Cc01_g03060;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Pentatricopeptide repeat-containing protein At1g11290,CC_functional_completeness:complete,CC_gene:PCMP-H40,CC_gene:PCMP-E23,CC_gene:PCMP-H77;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019041001~ Putative Pentatricopeptide repeat-containing protein At1g11290~ PCMP-H40~ complete;original_location=430334..431914;owner=coffea | |
| 3546 chr1 manual_curation exon 6412871 6413253 . - . Parent=GSCOCT00019041001 | |
| 3547 chr1 manual_curation exon 6411437 6411574 . - . Parent=GSCOCT00019041001 | |
| 3548 chr1 manual_curation exon 6414566 6416216 . - . Parent=GSCOCT00019041001 | |
| 3549 chr1 manual_curation CDS 6414636 6416216 . - 0 Parent=GSCOCT00019041001 | |
| 3550 chr1 manual_curation gene 6443678 6467779 . - . ID=GSCOCG00019040001;Name=Cc01_g03070 | |
| 3551 chr1 manual_curation mRNA 6443678 6467779 . - . ID=GSCOCT00019040001;Parent=GSCOCG00019040001;Name=Cc01_g03070 | |
| 3552 chr1 manual_curation polypeptide 6443678 6466785 . - . ID=GSCOCP00019040001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR011009,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q9FE20,SwissProt:Q9LQQ8,SwissProt:Q9SFT7,TAIR:AT5G02800.1,TAIR:AT5G13160.1,TAIR:AT5G18610.1,TrEMBL:B9RM95,TrEMBL:C6ZRR7,TrEMBL:I1NJF4;Derives_from=GSCOCT00019040001;Name=Cc01_g03070;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:PBS1,CC_gene:At1g07870,CC_gene:At3g07070;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019040001~ Hypothetical protein~ PBS1~ missing_functional_completeness;original_location=join(379765..379903%2C401085..401096%2C401251..401591%2C402711..402872);owner=coffea | |
| 3553 chr1 manual_curation exon 6467417 6467779 . - . Parent=GSCOCT00019040001 | |
| 3554 chr1 manual_curation exon 6467083 6467140 . - . Parent=GSCOCT00019040001 | |
| 3555 chr1 manual_curation exon 6466647 6466909 . - . Parent=GSCOCT00019040001 | |
| 3556 chr1 manual_curation exon 6445454 6445465 . - . Parent=GSCOCT00019040001 | |
| 3557 chr1 manual_curation exon 6444959 6445299 . - . Parent=GSCOCT00019040001 | |
| 3558 chr1 manual_curation exon 6443678 6443839 . - . Parent=GSCOCT00019040001 | |
| 3559 chr1 manual_curation CDS 6466647 6466785 . - 0 Parent=GSCOCT00019040001 | |
| 3560 chr1 manual_curation CDS 6445454 6445465 . - 1 Parent=GSCOCT00019040001 | |
| 3561 chr1 manual_curation CDS 6444959 6445299 . - 1 Parent=GSCOCT00019040001 | |
| 3562 chr1 manual_curation CDS 6443678 6443839 . - 0 Parent=GSCOCT00019040001 | |
| 3563 chr1 manual_curation gene 6470540 6473295 . + . ID=GSCOCG00019039001;Name=Cc01_g03080 | |
| 3564 chr1 manual_curation mRNA 6470540 6473295 . + . ID=GSCOCT00019039001;Parent=GSCOCG00019039001;Name=Cc01_g03080 | |
| 3565 chr1 manual_curation polypeptide 6470695 6472988 . + . ID=GSCOCP00019039001;Dbxref=InterPro:IPR000620,PFAM:PF00892,SwissProt:Q6J163,TAIR:AT3G28050.1,TAIR:AT5G40230.1,TAIR:AT5G40240.2,TrEMBL:F6HV17,TrEMBL:F6HV18,TrEMBL:Q9FL09;Derives_from=GSCOCT00019039001;Name=Cc01_g03080;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative Auxin-induced protein 5NG4,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019039001~ Putative Auxin-induced protein 5NG4~ unknown_gene~ fragment;original_location=complement(join(375710..375855%2C375570..375635%2C375321..375434%2C374473..374722%2C374221..374379%2C373830..373981%2C373562..373697));owner=coffea | |
| 3566 chr1 manual_curation exon 6472853 6473295 . + . Parent=GSCOCT00019039001 | |
| 3567 chr1 manual_curation exon 6472569 6472720 . + . Parent=GSCOCT00019039001 | |
| 3568 chr1 manual_curation exon 6472171 6472329 . + . Parent=GSCOCT00019039001 | |
| 3569 chr1 manual_curation exon 6471828 6472077 . + . Parent=GSCOCT00019039001 | |
| 3570 chr1 manual_curation exon 6471116 6471229 . + . Parent=GSCOCT00019039001 | |
| 3571 chr1 manual_curation exon 6470915 6470980 . + . Parent=GSCOCT00019039001 | |
| 3572 chr1 manual_curation exon 6470540 6470840 . + . Parent=GSCOCT00019039001 | |
| 3573 chr1 manual_curation CDS 6472853 6472988 . + 2 Parent=GSCOCT00019039001 | |
| 3574 chr1 manual_curation CDS 6472569 6472720 . + 0 Parent=GSCOCT00019039001 | |
| 3575 chr1 manual_curation CDS 6472171 6472329 . + 0 Parent=GSCOCT00019039001 | |
| 3576 chr1 manual_curation CDS 6471828 6472077 . + 2 Parent=GSCOCT00019039001 | |
| 3577 chr1 manual_curation CDS 6471116 6471229 . + 2 Parent=GSCOCT00019039001 | |
| 3578 chr1 manual_curation CDS 6470915 6470980 . + 2 Parent=GSCOCT00019039001 | |
| 3579 chr1 manual_curation CDS 6470695 6470840 . + 0 Parent=GSCOCT00019039001 | |
| 3580 chr1 manual_curation gene 6647715 6648615 . - . ID=GSCOCG00019035001;Name=Cc01_g03090 | |
| 3581 chr1 manual_curation mRNA 6647715 6648615 . - . ID=GSCOCT00019035001;Parent=GSCOCG00019035001;Name=Cc01_g03090 | |
| 3582 chr1 manual_curation polypeptide 6647837 6648545 . - . ID=GSCOCP00019035001;Derives_from=GSCOCT00019035001;Name=Cc01_g03090;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019035001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(198005..198193%2C198660..198713);owner=coffea | |
| 3583 chr1 manual_curation exon 6648357 6648615 . - . Parent=GSCOCT00019035001 | |
| 3584 chr1 manual_curation exon 6647715 6647890 . - . Parent=GSCOCT00019035001 | |
| 3585 chr1 manual_curation CDS 6648357 6648545 . - 0 Parent=GSCOCT00019035001 | |
| 3586 chr1 manual_curation CDS 6647837 6647890 . - 0 Parent=GSCOCT00019035001 | |
| 3587 chr1 manual_curation gene 6759622 6762445 . + . ID=GSCOCG00019030001;Name=Cc01_g03100 | |
| 3588 chr1 manual_curation mRNA 6759622 6762445 . + . ID=GSCOCT00019030001;Parent=GSCOCG00019030001;Name=Cc01_g03100 | |
| 3589 chr1 manual_curation polypeptide 6759622 6762234 . + . ID=GSCOCP00019030001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002403,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00465,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:O48786,SwissProt:Q05047,SwissProt:Q9SHG5,TAIR:AT3G14610.1,TAIR:AT3G14640.1,TAIR:AT3G14690.1,TrEMBL:B9N7U0,TrEMBL:F8S8F2,TrEMBL:H1A987;Derives_from=GSCOCT00019030001;Name=Cc01_g03100;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,CC_EC_number:1.3.3.9,PRODUCT:Secologanin synthase,CC_functional_completeness:complete,CC_gene:CYP72A1,CC_gene:CYP72C1,CC_gene:CYP734A1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019030001~ Secologanin synthase~ CYP72A1~ complete;original_location=complement(join(86649..86928%2C86284..86507%2C85942..86186%2C84916..85303%2C84316..84753));owner=coffea | |
| 3590 chr1 manual_curation exon 6761797 6762445 . + . Parent=GSCOCT00019030001 | |
| 3591 chr1 manual_curation exon 6761247 6761634 . + . Parent=GSCOCT00019030001 | |
| 3592 chr1 manual_curation exon 6760364 6760608 . + . Parent=GSCOCT00019030001 | |
| 3593 chr1 manual_curation exon 6760043 6760266 . + . Parent=GSCOCT00019030001 | |
| 3594 chr1 manual_curation exon 6759622 6759901 . + . Parent=GSCOCT00019030001 | |
| 3595 chr1 manual_curation CDS 6761797 6762234 . + 0 Parent=GSCOCT00019030001 | |
| 3596 chr1 manual_curation CDS 6761247 6761634 . + 2 Parent=GSCOCT00019030001 | |
| 3597 chr1 manual_curation CDS 6760364 6760608 . + 0 Parent=GSCOCT00019030001 | |
| 3598 chr1 manual_curation CDS 6760043 6760266 . + 1 Parent=GSCOCT00019030001 | |
| 3599 chr1 manual_curation CDS 6759622 6759901 . + 0 Parent=GSCOCT00019030001 | |
| 3600 chr1 manual_curation gene 6822092 6823185 . + . ID=GSCOCG00019028001;Name=Cc01_g03110 | |
| 3601 chr1 manual_curation mRNA 6822092 6823185 . + . ID=GSCOCT00019028001;Parent=GSCOCG00019028001;Name=Cc01_g03110 | |
| 3602 chr1 manual_curation polypeptide 6822092 6823185 . + . ID=GSCOCP00019028001;Dbxref=InterPro:IPR005299,PFAM:PF03492;Derives_from=GSCOCT00019028001;Name=Cc01_g03110;Ontology_term=CC_evidence_code:ISS,GO:0008168,CC_EC_number:missing_EC_number,PRODUCT:Putative SAM dependent carboxyl methyltransferase,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019028001~ Putative SAM dependent carboxyl methyltransferase~ unknown_gene~ complete;original_location=complement(join(24284..24458%2C24120..24173%2C23365..23693));owner=coffea | |
| 3603 chr1 manual_curation exon 6822857 6823185 . + . Parent=GSCOCT00019028001 | |
| 3604 chr1 manual_curation exon 6822377 6822430 . + . Parent=GSCOCT00019028001 | |
| 3605 chr1 manual_curation exon 6822092 6822266 . + . Parent=GSCOCT00019028001 | |
| 3606 chr1 manual_curation CDS 6822857 6823185 . + 1 Parent=GSCOCT00019028001 | |
| 3607 chr1 manual_curation CDS 6822377 6822430 . + 1 Parent=GSCOCT00019028001 | |
| 3608 chr1 manual_curation CDS 6822092 6822266 . + 0 Parent=GSCOCT00019028001 | |
| 3609 chr1 manual_curation gene 6825836 6827352 . - . ID=GSCOCG00019027001;Name=Cc01_g03120 | |
| 3610 chr1 manual_curation mRNA 6825836 6827352 . - . ID=GSCOCT00019027001;Parent=GSCOCG00019027001;Name=Cc01_g03120 | |
| 3611 chr1 manual_curation polypeptide 6825836 6827352 . - . ID=GSCOCP00019027001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR001360,InterPro:IPR013781,InterPro:IPR017853,PANTHER:PTHR10353,PFAM:PF00232,PRINTS:PR00131,SUPERFAMILY:SSF51445,SwissProt:Q7XKV2,SwissProt:Q7XKV4,SwissProt:Q7XKV5,TAIR:AT1G51470.1,TAIR:AT5G24540.1,TAIR:AT5G24550.1,TrEMBL:A2XUK4,TrEMBL:C5YAD5,TrEMBL:Q01KB3;Derives_from=GSCOCT00019027001;Name=Cc01_g03120;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0043169,CC_EC_number:3.2.1.21,PRODUCT:Beta-glucosidase 11,CC_functional_completeness:fragment,CC_gene:BGLU11,CC_gene:BGLU13,CC_gene:BGLU12;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019027001~ Beta-glucosidase 11~ BGLU11~ fragment;original_location=join(19198..19208%2C19322..19533%2C19839..19976%2C20084..20192%2C20546..20714);owner=coffea | |
| 3612 chr1 manual_curation exon 6827342 6827352 . - . Parent=GSCOCT00019027001 | |
| 3613 chr1 manual_curation exon 6827017 6827228 . - . Parent=GSCOCT00019027001 | |
| 3614 chr1 manual_curation exon 6826574 6826711 . - . Parent=GSCOCT00019027001 | |
| 3615 chr1 manual_curation exon 6826358 6826466 . - . Parent=GSCOCT00019027001 | |
| 3616 chr1 manual_curation exon 6825836 6826004 . - . Parent=GSCOCT00019027001 | |
| 3617 chr1 manual_curation CDS 6827342 6827352 . - 0 Parent=GSCOCT00019027001 | |
| 3618 chr1 manual_curation CDS 6827017 6827228 . - 2 Parent=GSCOCT00019027001 | |
| 3619 chr1 manual_curation CDS 6826574 6826711 . - 1 Parent=GSCOCT00019027001 | |
| 3620 chr1 manual_curation CDS 6826358 6826466 . - 1 Parent=GSCOCT00019027001 | |
| 3621 chr1 manual_curation CDS 6825836 6826004 . - 2 Parent=GSCOCT00019027001 | |
| 3622 chr1 manual_curation gene 6931503 6936931 . - . ID=GSCOCG00011771001;Name=Cc01_g03130 | |
| 3623 chr1 manual_curation mRNA 6931503 6936931 . - . ID=GSCOCT00011771001;Parent=GSCOCG00011771001;Name=Cc01_g03130 | |
| 3624 chr1 manual_curation polypeptide 6931933 6936683 . - . ID=GSCOCP00011771001;Dbxref=InterPro:IPR006767,InterPro:IPR006768,PFAM:PF04676,PFAM:PF04677,SwissProt:Q28C44,SwissProt:Q2TBE0,SwissProt:Q8BG79,TAIR:AT1G56290.1,TAIR:AT5G56900.2,TrEMBL:B9SK72,TrEMBL:D7T7A9,TrEMBL:I1NFV1;Derives_from=GSCOCT00011771001;Name=Cc01_g03130;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:CwfJ-like family protein,CC_functional_completeness:complete,CC_gene:cwf19l2,CC_gene:CWF19L2,CC_gene:Cwf19l2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011771001~ CwfJ-like family protein~ cwf19l2~ complete;original_location=complement(join(89992..90034%2C89706..89857%2C88596..88784%2C88348..88515%2C87352..88149%2C86468..86680%2C85284..85613));owner=coffea | |
| 3625 chr1 manual_curation exon 6931503 6932262 . - . Parent=GSCOCT00011771001 | |
| 3626 chr1 manual_curation exon 6933117 6933329 . - . Parent=GSCOCT00011771001 | |
| 3627 chr1 manual_curation exon 6934001 6934798 . - . Parent=GSCOCT00011771001 | |
| 3628 chr1 manual_curation exon 6934997 6935164 . - . Parent=GSCOCT00011771001 | |
| 3629 chr1 manual_curation exon 6935245 6935433 . - . Parent=GSCOCT00011771001 | |
| 3630 chr1 manual_curation exon 6936355 6936506 . - . Parent=GSCOCT00011771001 | |
| 3631 chr1 manual_curation exon 6936641 6936931 . - . Parent=GSCOCT00011771001 | |
| 3632 chr1 manual_curation CDS 6931933 6932262 . - 0 Parent=GSCOCT00011771001 | |
| 3633 chr1 manual_curation CDS 6933117 6933329 . - 0 Parent=GSCOCT00011771001 | |
| 3634 chr1 manual_curation CDS 6934001 6934798 . - 0 Parent=GSCOCT00011771001 | |
| 3635 chr1 manual_curation CDS 6934997 6935164 . - 0 Parent=GSCOCT00011771001 | |
| 3636 chr1 manual_curation CDS 6935245 6935433 . - 0 Parent=GSCOCT00011771001 | |
| 3637 chr1 manual_curation CDS 6936355 6936506 . - 1 Parent=GSCOCT00011771001 | |
| 3638 chr1 manual_curation CDS 6936641 6936683 . - 0 Parent=GSCOCT00011771001 | |
| 3639 chr1 manual_curation gene 6956062 6957387 . - . ID=GSCOCG00011772001;Name=Cc01_g03140 | |
| 3640 chr1 manual_curation mRNA 6956062 6957387 . - . ID=GSCOCT00011772001;Parent=GSCOCG00011772001;Name=Cc01_g03140 | |
| 3641 chr1 manual_curation polypeptide 6956062 6957387 . - . ID=GSCOCP00011772001;Dbxref=InterPro:IPR000163,PANTHER:PTHR23222,TAIR:AT1G03860.1,TAIR:AT2G20530.1,TAIR:AT4G28510.1,TrEMBL:A5BVI0,TrEMBL:F6H9U4,TrEMBL:Q45Q23;Derives_from=GSCOCT00011772001;Name=Cc01_g03140;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011772001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(110691..110738%2C110458..110499%2C109413..109526));owner=coffea | |
| 3642 chr1 manual_curation exon 6956062 6956175 . - . Parent=GSCOCT00011772001 | |
| 3643 chr1 manual_curation exon 6957107 6957148 . - . Parent=GSCOCT00011772001 | |
| 3644 chr1 manual_curation exon 6957340 6957387 . - . Parent=GSCOCT00011772001 | |
| 3645 chr1 manual_curation CDS 6956062 6956175 . - 0 Parent=GSCOCT00011772001 | |
| 3646 chr1 manual_curation CDS 6957107 6957148 . - 0 Parent=GSCOCT00011772001 | |
| 3647 chr1 manual_curation CDS 6957340 6957387 . - 0 Parent=GSCOCT00011772001 | |
| 3648 chr1 manual_curation gene 6963286 6965248 . + . ID=GSCOCG00033156001;Name=Cc01_g03150 | |
| 3649 chr1 manual_curation mRNA 6963286 6965248 . + . ID=GSCOCT00033156001;Parent=GSCOCG00033156001;Name=Cc01_g03150 | |
| 3650 chr1 manual_curation polypeptide 6963286 6965248 . + . ID=GSCOCP00033156001;Dbxref=InterPro:IPR005135,InterPro:IPR015706,PANTHER:PTHR19446,SUPERFAMILY:SSF56219,TrEMBL:B9ETF5,TrEMBL:C5YNA2,TrEMBL:C5Z721;Derives_from=GSCOCT00033156001;Name=Cc01_g03150;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein Sb07g024435 (Fragment),CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033156001~ Putative uncharacterized protein Sb07g024435 (Fragment)~ unknown_gene~ fragment;original_location=complement(join(2189927..2190442%2C2189180..2189384%2C2188480..2188919));owner=coffea | |
| 3651 chr1 manual_curation exon 6964809 6965248 . + . Parent=GSCOCT00033156001 | |
| 3652 chr1 manual_curation exon 6964344 6964548 . + . Parent=GSCOCT00033156001 | |
| 3653 chr1 manual_curation exon 6963286 6963801 . + . Parent=GSCOCT00033156001 | |
| 3654 chr1 manual_curation CDS 6964809 6965248 . + 1 Parent=GSCOCT00033156001 | |
| 3655 chr1 manual_curation CDS 6964344 6964548 . + 0 Parent=GSCOCT00033156001 | |
| 3656 chr1 manual_curation CDS 6963286 6963801 . + 0 Parent=GSCOCT00033156001 | |
| 3657 chr1 manual_curation gene 6973662 6974483 . + . ID=GSCOCG00033155001;Name=Cc01_g03160 | |
| 3658 chr1 manual_curation mRNA 6973662 6974483 . + . ID=GSCOCT00033155001;Parent=GSCOCG00033155001;Name=Cc01_g03160 | |
| 3659 chr1 manual_curation polypeptide 6973662 6974483 . + . ID=GSCOCP00033155001;Dbxref=InterPro:IPR004320,PFAM:PF03087,TAIR:AT2G17070.1,TAIR:AT2G17080.1,TAIR:AT4G35200.1,TrEMBL:B9SCA9,TrEMBL:B9SCB2,TrEMBL:B9T4T9;Derives_from=GSCOCT00033155001;Name=Cc01_g03160;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Arabidopsis protein of unknown function (DUF241),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033155001~ Putative Arabidopsis protein of unknown function (DUF241)~ unknown_gene~ complete;original_location=complement(2179245..2180066);owner=coffea | |
| 3660 chr1 manual_curation exon 6973662 6974483 . + . Parent=GSCOCT00033155001 | |
| 3661 chr1 manual_curation CDS 6973662 6974483 . + 0 Parent=GSCOCT00033155001 | |
| 3662 chr1 manual_curation gene 6977751 6987465 . + . ID=GSCOCG00033154001;Name=Cc01_g03170 | |
| 3663 chr1 manual_curation mRNA 6977751 6987465 . + . ID=GSCOCT00033154001;Parent=GSCOCG00033154001;Name=Cc01_g03170 | |
| 3664 chr1 manual_curation polypeptide 6978025 6986505 . + . ID=GSCOCP00033154001;Dbxref=InterPro:IPR006843,PFAM:PF04755,SwissProt:Q8LAP6,TAIR:AT1G51110.1,TrEMBL:B9GLL1,TrEMBL:B9SQ52,TrEMBL:D7SLD3;Derives_from=GSCOCT00033154001;Name=Cc01_g03170;Ontology_term=CC_evidence_code:ISS,GO:0005198,GO:0009507,CC_EC_number:missing_EC_number,PRODUCT:Probable plastid-lipid-associated protein 12%2C chloroplastic,CC_functional_completeness:complete,CC_gene:PAP12;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033154001~ Probable plastid-lipid-associated protein 12%2C chloroplastic~ PAP12~ complete;original_location=complement(join(2175566..2175703%2C2175022..2175075%2C2174694..2174768%2C2173616..2173735%2C2171597..2171788%2C2171354..2171437%2C2171130..2171222%2C2169749..2169802%2C2169552..2169631%2C2167426..2167533%2C2167223..2167310));owner=coffea | |
| 3665 chr1 manual_curation exon 6986418 6987465 . + . Parent=GSCOCT00033154001 | |
| 3666 chr1 manual_curation exon 6986195 6986302 . + . Parent=GSCOCT00033154001 | |
| 3667 chr1 manual_curation exon 6984097 6984176 . + . Parent=GSCOCT00033154001 | |
| 3668 chr1 manual_curation exon 6983926 6983979 . + . Parent=GSCOCT00033154001 | |
| 3669 chr1 manual_curation exon 6982506 6982598 . + . Parent=GSCOCT00033154001 | |
| 3670 chr1 manual_curation exon 6982291 6982374 . + . Parent=GSCOCT00033154001 | |
| 3671 chr1 manual_curation exon 6981940 6982131 . + . Parent=GSCOCT00033154001 | |
| 3672 chr1 manual_curation exon 6979993 6980112 . + . Parent=GSCOCT00033154001 | |
| 3673 chr1 manual_curation exon 6978960 6979034 . + . Parent=GSCOCT00033154001 | |
| 3674 chr1 manual_curation exon 6978653 6978706 . + . Parent=GSCOCT00033154001 | |
| 3675 chr1 manual_curation exon 6977751 6978162 . + . Parent=GSCOCT00033154001 | |
| 3676 chr1 manual_curation CDS 6986418 6986505 . + 2 Parent=GSCOCT00033154001 | |
| 3677 chr1 manual_curation CDS 6986195 6986302 . + 2 Parent=GSCOCT00033154001 | |
| 3678 chr1 manual_curation CDS 6984097 6984176 . + 0 Parent=GSCOCT00033154001 | |
| 3679 chr1 manual_curation CDS 6983926 6983979 . + 0 Parent=GSCOCT00033154001 | |
| 3680 chr1 manual_curation CDS 6982506 6982598 . + 0 Parent=GSCOCT00033154001 | |
| 3681 chr1 manual_curation CDS 6982291 6982374 . + 0 Parent=GSCOCT00033154001 | |
| 3682 chr1 manual_curation CDS 6981940 6982131 . + 0 Parent=GSCOCT00033154001 | |
| 3683 chr1 manual_curation CDS 6979993 6980112 . + 0 Parent=GSCOCT00033154001 | |
| 3684 chr1 manual_curation CDS 6978960 6979034 . + 0 Parent=GSCOCT00033154001 | |
| 3685 chr1 manual_curation CDS 6978653 6978706 . + 0 Parent=GSCOCT00033154001 | |
| 3686 chr1 manual_curation CDS 6978025 6978162 . + 0 Parent=GSCOCT00033154001 | |
| 3687 chr1 manual_curation gene 6987520 6990124 . - . ID=GSCOCG00033153001;Name=Cc01_g03180 | |
| 3688 chr1 manual_curation mRNA 6987520 6990124 . - . ID=GSCOCT00033153001;Parent=GSCOCG00033153001;Name=Cc01_g03180 | |
| 3689 chr1 manual_curation polypeptide 6987520 6990124 . - . ID=GSCOCP00033153001;Dbxref=InterPro:IPR000767,InterPro:IPR001611,InterPro:IPR002182,PFAM:PF00560,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q7XA40,SwissProt:Q7XA42,SwissProt:Q7XBQ9,TAIR:AT3G07040.1,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TrEMBL:B9IP06,TrEMBL:B9N7Z0,TrEMBL:B9NBB7;Derives_from=GSCOCT00033153001;Name=Cc01_g03180;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative NB-ARC domain-containing disease resistance protein,CC_functional_completeness:fragment,CC_gene:RGA3,CC_gene:RGA2,CC_gene:RGA1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033153001~ Putative NB-ARC domain-containing disease resistance protein~ RGA3~ fragment;original_location=join(2163604..2164891%2C2165198..2165793%2C2166071..2166208);owner=coffea | |
| 3690 chr1 manual_curation exon 6988837 6990124 . - . Parent=GSCOCT00033153001 | |
| 3691 chr1 manual_curation exon 6987935 6988530 . - . Parent=GSCOCT00033153001 | |
| 3692 chr1 manual_curation exon 6987520 6987657 . - . Parent=GSCOCT00033153001 | |
| 3693 chr1 manual_curation CDS 6988837 6990124 . - 0 Parent=GSCOCT00033153001 | |
| 3694 chr1 manual_curation CDS 6987935 6988530 . - 1 Parent=GSCOCT00033153001 | |
| 3695 chr1 manual_curation CDS 6987520 6987657 . - 0 Parent=GSCOCT00033153001 | |
| 3696 chr1 manual_curation gene 6992383 6992964 . - . ID=GSCOCG00033152001;Name=Cc01_g03190 | |
| 3697 chr1 manual_curation mRNA 6992383 6992964 . - . ID=GSCOCT00033152001;Parent=GSCOCG00033152001;Name=Cc01_g03190 | |
| 3698 chr1 manual_curation polypeptide 6992383 6992964 . - . ID=GSCOCP00033152001;Dbxref=SwissProt:O65451,TAIR:AT4G04480.1,TAIR:AT4G22030.1,TrEMBL:A5AXW6,TrEMBL:F6H7I0,TrEMBL:F6I2H2;Derives_from=GSCOCT00033152001;Name=Cc01_g03190;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Probable F-box protein At4g22030,CC_functional_completeness:fragment,CC_gene:At4g22030;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033152001~ Probable F-box protein At4g22030~ At4g22030~ fragment;original_location=2160764..2161345;owner=coffea | |
| 3699 chr1 manual_curation exon 6992383 6992964 . - . Parent=GSCOCT00033152001 | |
| 3700 chr1 manual_curation CDS 6992383 6992964 . - 0 Parent=GSCOCT00033152001 | |
| 3701 chr1 manual_curation gene 6993885 6994677 . - . ID=GSCOCG00033151001;Name=Cc01_g03200 | |
| 3702 chr1 manual_curation mRNA 6993885 6994677 . - . ID=GSCOCT00033151001;Parent=GSCOCG00033151001;Name=Cc01_g03200 | |
| 3703 chr1 manual_curation polypeptide 6994075 6994552 . - . ID=GSCOCP00033151001;Dbxref=TrEMBL:B9GUC5,TrEMBL:B9MYW7,TrEMBL:B9NFX1;Derives_from=GSCOCT00033151001;Name=Cc01_g03200;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Cc-nbs-lrr resistance protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033151001~ Putative Cc-nbs-lrr resistance protein~ unknown_gene~ fragment;original_location=join(2159176..2159484%2C2159627..2159653);owner=coffea | |
| 3704 chr1 manual_curation exon 6994244 6994677 . - . Parent=GSCOCT00033151001 | |
| 3705 chr1 manual_curation exon 6993885 6994101 . - . Parent=GSCOCT00033151001 | |
| 3706 chr1 manual_curation CDS 6994244 6994552 . - 0 Parent=GSCOCT00033151001 | |
| 3707 chr1 manual_curation CDS 6994075 6994101 . - 0 Parent=GSCOCT00033151001 | |
| 3708 chr1 manual_curation gene 6995987 6999020 . - . ID=GSCOCG00033150001;Name=Cc01_g03210 | |
| 3709 chr1 manual_curation mRNA 6995987 6999020 . - . ID=GSCOCT00033150001;Parent=GSCOCG00033150001;Name=Cc01_g03210 | |
| 3710 chr1 manual_curation polypeptide 6996508 6999020 . - . ID=GSCOCP00033150001;Dbxref=HAMAP:MF_00170,InterPro:IPR004788,InterPro:IPR020672,PANTHER:PTHR11934,PFAM:PF06026,SwissProt:B8FL28,SwissProt:Q2JSC9,SwissProt:Q9ZU38,TAIR:AT1G71100.1,TAIR:AT2G01290.1,TAIR:AT3G04790.1,TIGRFAMs:TIGR00021,TrEMBL:F6HTS6,TrEMBL:G7L1U4,TrEMBL:I1NC83;Derives_from=GSCOCT00033150001;Name=Cc01_g03210;Ontology_term=CC_evidence_code:ISS,GO:0004751,CC_EC_number:5.3.1.6,PRODUCT:Probable ribose-5-phosphate isomerase,CC_functional_completeness:modules,CC_gene:At2g01290,CC_gene:rpiA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033150001~ Probable ribose-5-phosphate isomerase~ At2g01290~ modules;original_location=join(2154708..2155536%2C2157180..2157220);owner=coffea | |
| 3711 chr1 manual_curation exon 6998192 6999020 . - . Parent=GSCOCT00033150001 | |
| 3712 chr1 manual_curation exon 6995987 6996548 . - . Parent=GSCOCT00033150001 | |
| 3713 chr1 manual_curation CDS 6998192 6999020 . - 0 Parent=GSCOCT00033150001 | |
| 3714 chr1 manual_curation CDS 6996508 6996548 . - 1 Parent=GSCOCT00033150001 | |
| 3715 chr1 manual_curation gene 7000134 7003753 . - . ID=GSCOCG00033149001;Name=Cc01_g03220 | |
| 3716 chr1 manual_curation mRNA 7000134 7003753 . - . ID=GSCOCT00033149001;Parent=GSCOCG00033149001;Name=Cc01_g03220 | |
| 3717 chr1 manual_curation polypeptide 7000134 7003753 . - . ID=GSCOCP00033149001;Dbxref=InterPro:IPR001611,PFAM:PF00560,SwissProt:C0LGQ5,SwissProt:Q8VZG8,SwissProt:Q9M0G7,TAIR:AT4G20140.1,TAIR:AT4G28650.1,TAIR:AT5G25910.1,TrEMBL:F6H6A5,TrEMBL:G5CBV1,TrEMBL:I1MPS1;Derives_from=GSCOCT00033149001;Name=Cc01_g03220;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative LRR receptor-like serine/threonine-protein kinase GSO1,CC_functional_completeness:complete,CC_gene:GSO1,CC_gene:PXL2,CC_gene:At4g08850;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033149001~ Putative LRR receptor-like serine/threonine-protein kinase GSO1~ GSO1~ complete;original_location=join(2149975..2150029%2C2151482..2151627%2C2152323..2152710%2C2152859..2153099%2C2153251..2153270%2C2153416..2153594);owner=coffea | |
| 3718 chr1 manual_curation exon 7003699 7003753 . - . Parent=GSCOCT00033149001 | |
| 3719 chr1 manual_curation exon 7002101 7002246 . - . Parent=GSCOCT00033149001 | |
| 3720 chr1 manual_curation exon 7001018 7001405 . - . Parent=GSCOCT00033149001 | |
| 3721 chr1 manual_curation exon 7000629 7000869 . - . Parent=GSCOCT00033149001 | |
| 3722 chr1 manual_curation exon 7000458 7000477 . - . Parent=GSCOCT00033149001 | |
| 3723 chr1 manual_curation exon 7000134 7000312 . - . Parent=GSCOCT00033149001 | |
| 3724 chr1 manual_curation CDS 7003699 7003753 . - 0 Parent=GSCOCT00033149001 | |
| 3725 chr1 manual_curation CDS 7002101 7002246 . - 1 Parent=GSCOCT00033149001 | |
| 3726 chr1 manual_curation CDS 7001018 7001405 . - 0 Parent=GSCOCT00033149001 | |
| 3727 chr1 manual_curation CDS 7000629 7000869 . - 1 Parent=GSCOCT00033149001 | |
| 3728 chr1 manual_curation CDS 7000458 7000477 . - 2 Parent=GSCOCT00033149001 | |
| 3729 chr1 manual_curation CDS 7000134 7000312 . - 1 Parent=GSCOCT00033149001 | |
| 3730 chr1 manual_curation gene 7009131 7009475 . - . ID=GSCOCG00033148001;Name=Cc01_g03230 | |
| 3731 chr1 manual_curation mRNA 7009131 7009475 . - . ID=GSCOCT00033148001;Parent=GSCOCG00033148001;Name=Cc01_g03230 | |
| 3732 chr1 manual_curation polypeptide 7009131 7009475 . - . ID=GSCOCP00033148001;Dbxref=InterPro:IPR004788,PANTHER:PTHR11934,TAIR:AT3G04790.1,TrEMBL:C6TEW9,TrEMBL:G7L1U4,TrEMBL:I1NC83;Derives_from=GSCOCT00033148001;Name=Cc01_g03230;Ontology_term=CC_evidence_code:ISS,GO:0004751,CC_EC_number:5.3.1.6,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033148001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=2144253..2144597;owner=coffea | |
| 3733 chr1 manual_curation exon 7009131 7009475 . - . Parent=GSCOCT00033148001 | |
| 3734 chr1 manual_curation CDS 7009131 7009475 . - 0 Parent=GSCOCT00033148001 | |
| 3735 chr1 manual_curation gene 7030448 7034678 . - . ID=GSCOCG00033146001;Name=Cc01_g03240 | |
| 3736 chr1 manual_curation mRNA 7030448 7034678 . - . ID=GSCOCT00033146001;Parent=GSCOCG00033146001;Name=Cc01_g03240 | |
| 3737 chr1 manual_curation polypeptide 7030448 7034678 . - . ID=GSCOCP00033146001;Dbxref=InterPro:IPR000767,InterPro:IPR001611,InterPro:IPR002182,PFAM:PF00560,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q7XA39,SwissProt:Q7XA40,SwissProt:Q7XA42,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TAIR:AT3G50950.2,TrEMBL:B9NBC0,TrEMBL:B9NED8,TrEMBL:Q19PN6;Derives_from=GSCOCT00033146001;Name=Cc01_g03240;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance protein RGA3,CC_functional_completeness:complete,CC_gene:RGA3,CC_gene:RGA4,CC_gene:RGA1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033146001~ Putative disease resistance protein RGA3~ RGA3~ complete;original_location=join(2119050..2119568%2C2119990..2120031%2C2120118..2122801%2C2122863..2123280);owner=coffea | |
| 3738 chr1 manual_curation exon 7034160 7034678 . - . Parent=GSCOCT00033146001 | |
| 3739 chr1 manual_curation exon 7033697 7033738 . - . Parent=GSCOCT00033146001 | |
| 3740 chr1 manual_curation exon 7030927 7033610 . - . Parent=GSCOCT00033146001 | |
| 3741 chr1 manual_curation exon 7030448 7030865 . - . Parent=GSCOCT00033146001 | |
| 3742 chr1 manual_curation CDS 7034160 7034678 . - 0 Parent=GSCOCT00033146001 | |
| 3743 chr1 manual_curation CDS 7033697 7033738 . - 0 Parent=GSCOCT00033146001 | |
| 3744 chr1 manual_curation CDS 7030927 7033610 . - 0 Parent=GSCOCT00033146001 | |
| 3745 chr1 manual_curation CDS 7030448 7030865 . - 2 Parent=GSCOCT00033146001 | |
| 3746 chr1 manual_curation gene 7063845 7067114 . - . ID=GSCOCG00033143001;Name=Cc01_g03250 | |
| 3747 chr1 manual_curation mRNA 7063845 7067114 . - . ID=GSCOCT00033143001;Parent=GSCOCG00033143001;Name=Cc01_g03250 | |
| 3748 chr1 manual_curation polypeptide 7063845 7067114 . - . ID=GSCOCP00033143001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q7XA40,SwissProt:Q7XA42,SwissProt:Q7XBQ9,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TAIR:AT3G46710.1,TrEMBL:B9NBB7,TrEMBL:B9NBB9,TrEMBL:B9NED8;Derives_from=GSCOCT00033143001;Name=Cc01_g03250;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance protein RGA3,CC_functional_completeness:complete,CC_gene:RGA3,CC_gene:RGA2,CC_gene:RGA1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033143001~ Putative disease resistance protein RGA3~ RGA3~ complete;original_location=join(2086614..2086666%2C2086793..2088459%2C2088529..2088731%2C2088927..2089398%2C2089447..2089883);owner=coffea | |
| 3749 chr1 manual_curation exon 7067062 7067114 . - . Parent=GSCOCT00033143001 | |
| 3750 chr1 manual_curation exon 7065269 7066935 . - . Parent=GSCOCT00033143001 | |
| 3751 chr1 manual_curation exon 7064997 7065199 . - . Parent=GSCOCT00033143001 | |
| 3752 chr1 manual_curation exon 7064330 7064801 . - . Parent=GSCOCT00033143001 | |
| 3753 chr1 manual_curation exon 7063845 7064281 . - . Parent=GSCOCT00033143001 | |
| 3754 chr1 manual_curation CDS 7067062 7067114 . - 0 Parent=GSCOCT00033143001 | |
| 3755 chr1 manual_curation CDS 7065269 7066935 . - 2 Parent=GSCOCT00033143001 | |
| 3756 chr1 manual_curation CDS 7064997 7065199 . - 1 Parent=GSCOCT00033143001 | |
| 3757 chr1 manual_curation CDS 7064330 7064801 . - 0 Parent=GSCOCT00033143001 | |
| 3758 chr1 manual_curation CDS 7063845 7064281 . - 1 Parent=GSCOCT00033143001 | |
| 3759 chr1 manual_curation gene 7072065 7079532 . - . ID=GSCOCG00033141001;Name=Cc01_g03260 | |
| 3760 chr1 manual_curation mRNA 7072065 7079532 . - . ID=GSCOCT00033141001;Parent=GSCOCG00033141001;Name=Cc01_g03260 | |
| 3761 chr1 manual_curation polypeptide 7072237 7077985 . - . ID=GSCOCP00033141001;Dbxref=GENE3D:G3DSA:2.30.30.30,GENE3D:G3DSA:2.40.50.140,InterPro:IPR001059,InterPro:IPR008991,InterPro:IPR012340,InterPro:IPR013185,InterPro:IPR013852,InterPro:IPR014722,InterPro:IPR015365,InterPro:IPR016027,InterPro:IPR020599,PFAM:PF01132,PFAM:PF08207,PFAM:PF09285,PIR:PIRSF005901,PROSITE:PS01275,SMART:SM00841,SUPERFAMILY:SSF50104,SUPERFAMILY:SSF50249,SwissProt:Q0BT69,SwissProt:Q5FUC7,SwissProt:Q5NQQ2,TAIR:AT3G08740.1,TAIR:AT4G26310.2,TrEMBL:D7SLK8,TrEMBL:I1PGI0,TrEMBL:Q84M44;Derives_from=GSCOCT00033141001;Name=Cc01_g03260;Ontology_term=CC_evidence_code:ISS,GO:0003746,GO:0006414,CC_EC_number:missing_EC_number,PRODUCT:Putative Elongation factor P,CC_functional_completeness:complete,CC_gene:efp;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033141001~ Putative Elongation factor P~ efp~ complete;original_location=join(2075743..2075760%2C2075971..2076036%2C2076939..2077008%2C2077987..2078053%2C2078142..2078209%2C2078388..2078511%2C2079646..2079685%2C2081015..2081082%2C2081485..2081491);owner=coffea | |
| 3762 chr1 manual_curation exon 7079257 7079532 . - . Parent=GSCOCT00033141001 | |
| 3763 chr1 manual_curation exon 7077968 7077998 . - . Parent=GSCOCT00033141001 | |
| 3764 chr1 manual_curation exon 7077692 7077757 . - . Parent=GSCOCT00033141001 | |
| 3765 chr1 manual_curation exon 7076720 7076789 . - . Parent=GSCOCT00033141001 | |
| 3766 chr1 manual_curation exon 7075675 7075741 . - . Parent=GSCOCT00033141001 | |
| 3767 chr1 manual_curation exon 7075519 7075586 . - . Parent=GSCOCT00033141001 | |
| 3768 chr1 manual_curation exon 7075217 7075340 . - . Parent=GSCOCT00033141001 | |
| 3769 chr1 manual_curation exon 7074043 7074082 . - . Parent=GSCOCT00033141001 | |
| 3770 chr1 manual_curation exon 7072646 7072713 . - . Parent=GSCOCT00033141001 | |
| 3771 chr1 manual_curation exon 7072065 7072243 . - . Parent=GSCOCT00033141001 | |
| 3772 chr1 manual_curation CDS 7077968 7077985 . - 0 Parent=GSCOCT00033141001 | |
| 3773 chr1 manual_curation CDS 7077692 7077757 . - 0 Parent=GSCOCT00033141001 | |
| 3774 chr1 manual_curation CDS 7076720 7076789 . - 0 Parent=GSCOCT00033141001 | |
| 3775 chr1 manual_curation CDS 7075675 7075741 . - 1 Parent=GSCOCT00033141001 | |
| 3776 chr1 manual_curation CDS 7075519 7075586 . - 2 Parent=GSCOCT00033141001 | |
| 3777 chr1 manual_curation CDS 7075217 7075340 . - 1 Parent=GSCOCT00033141001 | |
| 3778 chr1 manual_curation CDS 7074043 7074082 . - 2 Parent=GSCOCT00033141001 | |
| 3779 chr1 manual_curation CDS 7072646 7072713 . - 0 Parent=GSCOCT00033141001 | |
| 3780 chr1 manual_curation CDS 7072237 7072243 . - 2 Parent=GSCOCT00033141001 | |
| 3781 chr1 manual_curation gene 7083002 7084540 . - . ID=GSCOCG00033140001;Name=Cc01_g03270 | |
| 3782 chr1 manual_curation mRNA 7083002 7084540 . - . ID=GSCOCT00033140001;Parent=GSCOCG00033140001;Name=Cc01_g03270 | |
| 3783 chr1 manual_curation polypeptide 7083002 7084540 . - . ID=GSCOCP00033140001;Dbxref=SwissProt:Q9LRR4,SwissProt:Q9LRR5,TAIR:AT1G69550.1,TAIR:AT3G25510.1,TAIR:AT5G44510.1,TrEMBL:B9IBM5,TrEMBL:B9N7Y0,TrEMBL:B9NEE4;Derives_from=GSCOCT00033140001;Name=Cc01_g03270;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative target of AVRB operation1,CC_functional_completeness:fragment,CC_gene:RPPL1,CC_gene:At3g14460;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033140001~ Putative target of AVRB operation1~ RPPL1~ fragment;original_location=join(2069188..2069347%2C2069711..2070348%2C2070496..2070726);owner=coffea | |
| 3784 chr1 manual_curation exon 7084381 7084540 . - . Parent=GSCOCT00033140001 | |
| 3785 chr1 manual_curation exon 7083380 7084017 . - . Parent=GSCOCT00033140001 | |
| 3786 chr1 manual_curation exon 7083002 7083232 . - . Parent=GSCOCT00033140001 | |
| 3787 chr1 manual_curation CDS 7084381 7084540 . - 0 Parent=GSCOCT00033140001 | |
| 3788 chr1 manual_curation CDS 7083380 7084017 . - 1 Parent=GSCOCT00033140001 | |
| 3789 chr1 manual_curation CDS 7083002 7083232 . - 0 Parent=GSCOCT00033140001 | |
| 3790 chr1 manual_curation gene 7094959 7096771 . - . ID=GSCOCG00033139001;Name=Cc01_g03280 | |
| 3791 chr1 manual_curation mRNA 7094959 7096771 . - . ID=GSCOCT00033139001;Parent=GSCOCG00033139001;Name=Cc01_g03280 | |
| 3792 chr1 manual_curation polypeptide 7094959 7096632 . - . ID=GSCOCP00033139001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:O64635,SwissProt:O64636,SwissProt:O64638,TAIR:AT2G45550.1,TAIR:AT2G45580.1,TAIR:AT3G61040.1,TrEMBL:B3EXG1,TrEMBL:F6I332,TrEMBL:F6I337;Derives_from=GSCOCT00033139001;Name=Cc01_g03280;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.21,PRODUCT:Putative Cytochrome P450 76C4,CC_functional_completeness:complete,CC_gene:CYP76C4,CC_gene:CYP76C3,CC_gene:CYP76C1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033139001~ Putative Cytochrome P450 76C4~ CYP76C4~ complete;original_location=join(2057096..2057746%2C2057825..2058019%2C2058164..2058769);owner=coffea | |
| 3793 chr1 manual_curation exon 7095982 7096771 . - . Parent=GSCOCT00033139001 | |
| 3794 chr1 manual_curation exon 7095709 7095903 . - . Parent=GSCOCT00033139001 | |
| 3795 chr1 manual_curation exon 7094959 7095564 . - . Parent=GSCOCT00033139001 | |
| 3796 chr1 manual_curation CDS 7095982 7096632 . - 0 Parent=GSCOCT00033139001 | |
| 3797 chr1 manual_curation CDS 7095709 7095903 . - 0 Parent=GSCOCT00033139001 | |
| 3798 chr1 manual_curation CDS 7094959 7095564 . - 0 Parent=GSCOCT00033139001 | |
| 3799 chr1 manual_curation gene 7267517 7269323 . - . ID=GSCOCG00033134001;Name=Cc01_g03290 | |
| 3800 chr1 manual_curation mRNA 7267517 7269323 . - . ID=GSCOCT00033134001;Parent=GSCOCG00033134001;Name=Cc01_g03290 | |
| 3801 chr1 manual_curation polypeptide 7268114 7268962 . - . ID=GSCOCP00033134001;Dbxref=TAIR:AT1G64980.1,TrEMBL:D7KZ33,TrEMBL:F6HEC6,TrEMBL:Q9XIP8;Derives_from=GSCOCT00033134001;Name=Cc01_g03290;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Nucleotide-diphospho-sugar transferases superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033134001~ Nucleotide-diphospho-sugar transferases superfamily protein~ unknown_gene~ complete;original_location=1884766..1885614;owner=coffea | |
| 3802 chr1 manual_curation exon 7269097 7269323 . - . Parent=GSCOCT00033134001 | |
| 3803 chr1 manual_curation exon 7267517 7268985 . - . Parent=GSCOCT00033134001 | |
| 3804 chr1 manual_curation CDS 7268114 7268962 . - 0 Parent=GSCOCT00033134001 | |
| 3805 chr1 manual_curation gene 7278049 7282856 . - . ID=GSCOCG00033133001;Name=Cc01_g03300 | |
| 3806 chr1 manual_curation mRNA 7278049 7282856 . - . ID=GSCOCT00033133001;Parent=GSCOCG00033133001;Name=Cc01_g03300 | |
| 3807 chr1 manual_curation polypeptide 7278792 7281477 . - . ID=GSCOCP00033133001;Dbxref=InterPro:IPR002097,PFAM:PF00235,SUPERFAMILY:SSF55770,TAIR:AT4G19400.1,TrEMBL:B9RU02,TrEMBL:D7TFE5,TrEMBL:I1NCB8;Derives_from=GSCOCT00033133001;Name=Cc01_g03300;Ontology_term=CC_evidence_code:ISS,GO:0003779,GO:0007010,GO:0015629,CC_EC_number:missing_EC_number,PRODUCT:Profilin family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033133001~ Profilin family protein~ unknown_gene~ complete;original_location=join(1872251..1872305%2C1872438..1872507%2C1873836..1873945%2C1874610..1874724%2C1874852..1874936);owner=coffea | |
| 3808 chr1 manual_curation exon 7282714 7282856 . - . Parent=GSCOCT00033133001 | |
| 3809 chr1 manual_curation exon 7281423 7281494 . - . Parent=GSCOCT00033133001 | |
| 3810 chr1 manual_curation exon 7281221 7281290 . - . Parent=GSCOCT00033133001 | |
| 3811 chr1 manual_curation exon 7279783 7279892 . - . Parent=GSCOCT00033133001 | |
| 3812 chr1 manual_curation exon 7279004 7279118 . - . Parent=GSCOCT00033133001 | |
| 3813 chr1 manual_curation exon 7278049 7278876 . - . Parent=GSCOCT00033133001 | |
| 3814 chr1 manual_curation CDS 7281423 7281477 . - 0 Parent=GSCOCT00033133001 | |
| 3815 chr1 manual_curation CDS 7281221 7281290 . - 1 Parent=GSCOCT00033133001 | |
| 3816 chr1 manual_curation CDS 7279783 7279892 . - 2 Parent=GSCOCT00033133001 | |
| 3817 chr1 manual_curation CDS 7279004 7279118 . - 1 Parent=GSCOCT00033133001 | |
| 3818 chr1 manual_curation CDS 7278792 7278876 . - 2 Parent=GSCOCT00033133001 | |
| 3819 chr1 manual_curation gene 7297484 7299319 . - . ID=GSCOCG00033130001;Name=Cc01_g03310 | |
| 3820 chr1 manual_curation mRNA 7297484 7299319 . - . ID=GSCOCT00033130001;Parent=GSCOCG00033130001;Name=Cc01_g03310 | |
| 3821 chr1 manual_curation polypeptide 7297745 7299319 . - . ID=GSCOCP00033130001;Dbxref=GENE3D:G3DSA:1.25.40.10,InterPro:IPR002885,InterPro:IPR011990,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q9C501,SwissProt:Q9FIF7,SwissProt:Q9SIL5,TAIR:AT1G33350.1,TAIR:AT2G20540.1,TAIR:AT5G59200.1,TIGRFAMs:TIGR00756,TrEMBL:D7KIH8,TrEMBL:G7KMV5,TrEMBL:I1MQA1;Derives_from=GSCOCT00033130001;Name=Cc01_g03310;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At1g33350,CC_functional_completeness:complete,CC_gene:PCMP-E57,CC_gene:PCMP-E78,CC_gene:PCMP-E41;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033130001~ Pentatricopeptide repeat-containing protein At1g33350~ PCMP-E57~ complete;original_location=1854409..1855983;owner=coffea | |
| 3822 chr1 manual_curation exon 7297484 7299319 . - . Parent=GSCOCT00033130001 | |
| 3823 chr1 manual_curation CDS 7297745 7299319 . - 0 Parent=GSCOCT00033130001 | |
| 3824 chr1 manual_curation gene 7336754 7337116 . - . ID=GSCOCG00033129001;Name=Cc01_g03320 | |
| 3825 chr1 manual_curation mRNA 7336754 7337116 . - . ID=GSCOCT00033129001;Parent=GSCOCG00033129001;Name=Cc01_g03320 | |
| 3826 chr1 manual_curation polypeptide 7336754 7337116 . - . ID=GSCOCP00033129001;Dbxref=InterPro:IPR001950,PFAM:PF01253,PROFILE:PS50296,SUPERFAMILY:SSF55159,SwissProt:A6MZM2,SwissProt:P56330,SwissProt:Q0D5W6,TAIR:AT1G54290.1,TAIR:AT4G27130.1,TAIR:AT5G54760.1,TrEMBL:F6H9A6;Derives_from=GSCOCT00033129001;Name=Cc01_g03320;Ontology_term=CC_evidence_code:ISS,GO:0003743,GO:0006413,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:TIF,CC_gene:GOS2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033129001~ Hypothetical protein~ TIF~ missing_functional_completeness;original_location=1816612..1816974;owner=coffea | |
| 3827 chr1 manual_curation exon 7336754 7337116 . - . Parent=GSCOCT00033129001 | |
| 3828 chr1 manual_curation CDS 7336754 7337116 . - 0 Parent=GSCOCT00033129001 | |
| 3829 chr1 manual_curation gene 7338651 7341920 . + . ID=GSCOCG00033127001;Name=Cc01_g03330 | |
| 3830 chr1 manual_curation mRNA 7338651 7341920 . + . ID=GSCOCT00033127001;Parent=GSCOCG00033127001;Name=Cc01_g03330 | |
| 3831 chr1 manual_curation polypeptide 7338667 7341230 . + . ID=GSCOCP00033127001;Dbxref=InterPro:IPR001650,InterPro:IPR007529,InterPro:IPR011545,InterPro:IPR014001,InterPro:IPR014014,InterPro:IPR014021,PFAM:PF00270,PFAM:PF00271,PFAM:PF04438,PROFILE:PS51192,PROFILE:PS51194,PROFILE:PS51195,SMART:SM00487,SMART:SM00490,SwissProt:Q0E2Z7,SwissProt:Q3EBD3,SwissProt:Q9DBN9,TAIR:AT2G42520.1,TAIR:AT3G02065.2,TAIR:AT3G58570.1,TrEMBL:B9IA30,TrEMBL:B9RGT5,TrEMBL:F6H410;Derives_from=GSCOCT00033127001;Name=Cc01_g03330;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0004386,GO:0005524,GO:0008026,CC_EC_number:missing_EC_number,PRODUCT:DEAD-box ATP-dependent RNA helicase 41,CC_functional_completeness:complete,CC_gene:Os02g0201900,CC_gene:RH41,CC_gene:Ddx59;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033127001~ DEAD-box ATP-dependent RNA helicase 41~ Os02g0201900~ complete;original_location=complement(join(1815022..1815061%2C1812964..1814432%2C1812815..1812844%2C1812498..1812518));owner=coffea | |
| 3832 chr1 manual_curation exon 7341210 7341920 . + . Parent=GSCOCT00033127001 | |
| 3833 chr1 manual_curation exon 7340884 7340913 . + . Parent=GSCOCT00033127001 | |
| 3834 chr1 manual_curation exon 7339296 7340764 . + . Parent=GSCOCT00033127001 | |
| 3835 chr1 manual_curation exon 7338651 7338706 . + . Parent=GSCOCT00033127001 | |
| 3836 chr1 manual_curation CDS 7341210 7341230 . + 0 Parent=GSCOCT00033127001 | |
| 3837 chr1 manual_curation CDS 7340884 7340913 . + 0 Parent=GSCOCT00033127001 | |
| 3838 chr1 manual_curation CDS 7339296 7340764 . + 1 Parent=GSCOCT00033127001 | |
| 3839 chr1 manual_curation CDS 7338667 7338706 . + 0 Parent=GSCOCT00033127001 | |
| 3840 chr1 manual_curation gene 7368242 7372777 . - . ID=GSCOCG00033126001;Name=Cc01_g03340 | |
| 3841 chr1 manual_curation mRNA 7368242 7372777 . - . ID=GSCOCT00033126001;Parent=GSCOCG00033126001;Name=Cc01_g03340 | |
| 3842 chr1 manual_curation polypeptide 7370059 7372402 . - . ID=GSCOCP00033126001;Dbxref=TAIR:AT5G19900.1,TrEMBL:B9SQ53,TrEMBL:I1LFH8,TrEMBL:I1NJ98;Derives_from=GSCOCT00033126001;Name=Cc01_g03340;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033126001~ Uncharacterized protein~ unknown_gene~ complete;original_location=join(1781326..1781439%2C1781569..1783028%2C1783630..1783669);owner=coffea | |
| 3843 chr1 manual_curation exon 7368896 7369113 . - . Parent=GSCOCT00033126001 | |
| 3844 chr1 manual_curation exon 7368618 7368724 . - . Parent=GSCOCT00033126001 | |
| 3845 chr1 manual_curation exon 7368242 7368445 . - . Parent=GSCOCT00033126001 | |
| 3846 chr1 manual_curation exon 7372289 7372777 . - . Parent=GSCOCT00033126001 | |
| 3847 chr1 manual_curation exon 7370700 7372159 . - . Parent=GSCOCT00033126001 | |
| 3848 chr1 manual_curation exon 7370034 7370098 . - . Parent=GSCOCT00033126001 | |
| 3849 chr1 manual_curation CDS 7372289 7372402 . - 0 Parent=GSCOCT00033126001 | |
| 3850 chr1 manual_curation CDS 7370700 7372159 . - 0 Parent=GSCOCT00033126001 | |
| 3851 chr1 manual_curation CDS 7370059 7370098 . - 2 Parent=GSCOCT00033126001 | |
| 3852 chr1 manual_curation gene 7375119 7419382 . - . ID=GSCOCG00033125001;Name=Cc01_g03350 | |
| 3853 chr1 manual_curation mRNA 7375119 7419382 . - . ID=GSCOCT00033125001;Parent=GSCOCG00033125001;Name=Cc01_g03350 | |
| 3854 chr1 manual_curation polypeptide 7375472 7418542 . - . ID=GSCOCP00033125001;Dbxref=InterPro:IPR003440,PFAM:PF02364,SwissProt:Q9SFU6,SwissProt:Q9SJM0,SwissProt:Q9SL03,TAIR:AT2G31960.1,TAIR:AT2G36850.1,TAIR:AT3G07160.1,TrEMBL:B9SQ54,TrEMBL:I1NJA0,TrEMBL:Q9XEG1;Derives_from=GSCOCT00033125001;Name=Cc01_g03350;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:2.4.1.34,PRODUCT:Callose synthase 9,CC_functional_completeness:complete,CC_gene:CALS9,CC_gene:CALS10,CC_gene:CALS2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033125001~ Callose synthase 9~ CALS9~ complete;original_location=join(1735186..1735387%2C1738534..1738631%2C1739270..1739433%2C1740345..1740468%2C1741663..1741773%2C1741853..1741978%2C1745006..1745095%2C1746304..1746401%2C1746529..1746646%2C1746880..1747005%2C1748350..1748426%2C1748500..1748578%2C1750040..1750162%2C1751628..1751730%2C1752543..1752666%2C1752783..1752972%2C1753073..1753125%2C1755363..1755423%2C1755513..1755594%2C1755912..1755961%2C1756915..1757001%2C1757118..1757203%2C1757284..1757308%2C1759373..1759467%2C1759560..1759641%2C1759749..1759921%2C1760756..1760876%2C1762330..1762427%2C1762520..1762610%2C1762685..1762845%2C1762928..1763037%2C1764453..1764587%2C1765503..1765571%2C1765650..1765827%2C1766094..1766208%2C1767113..1767232%2C1768195..1768310%2C1768394..1768477%2C1768582..1768694%2C1770149..1770201%2C1770283..1770459%2C1771784..1771831%2C1772181..1772339%2C1772914..1773027%2C1773109..1773197%2C1773307..1773465%2C1773546..1773648%2C1774747..1774866%2C1776642..1776692%2C1776773..1776955%2C1778020..1778256);owner=coffea | |
| 3855 chr1 manual_curation exon 7419173 7419382 . - . Parent=GSCOCT00033125001 | |
| 3856 chr1 manual_curation exon 7418341 7418545 . - . Parent=GSCOCT00033125001 | |
| 3857 chr1 manual_curation exon 7415097 7415194 . - . Parent=GSCOCT00033125001 | |
| 3858 chr1 manual_curation exon 7414295 7414458 . - . Parent=GSCOCT00033125001 | |
| 3859 chr1 manual_curation exon 7413260 7413383 . - . Parent=GSCOCT00033125001 | |
| 3860 chr1 manual_curation exon 7411955 7412065 . - . Parent=GSCOCT00033125001 | |
| 3861 chr1 manual_curation exon 7411750 7411875 . - . Parent=GSCOCT00033125001 | |
| 3862 chr1 manual_curation exon 7408633 7408722 . - . Parent=GSCOCT00033125001 | |
| 3863 chr1 manual_curation exon 7407327 7407424 . - . Parent=GSCOCT00033125001 | |
| 3864 chr1 manual_curation exon 7407082 7407199 . - . Parent=GSCOCT00033125001 | |
| 3865 chr1 manual_curation exon 7406723 7406848 . - . Parent=GSCOCT00033125001 | |
| 3866 chr1 manual_curation exon 7405302 7405378 . - . Parent=GSCOCT00033125001 | |
| 3867 chr1 manual_curation exon 7405150 7405228 . - . Parent=GSCOCT00033125001 | |
| 3868 chr1 manual_curation exon 7403566 7403688 . - . Parent=GSCOCT00033125001 | |
| 3869 chr1 manual_curation exon 7401998 7402100 . - . Parent=GSCOCT00033125001 | |
| 3870 chr1 manual_curation exon 7401062 7401185 . - . Parent=GSCOCT00033125001 | |
| 3871 chr1 manual_curation exon 7400756 7400945 . - . Parent=GSCOCT00033125001 | |
| 3872 chr1 manual_curation exon 7400603 7400655 . - . Parent=GSCOCT00033125001 | |
| 3873 chr1 manual_curation exon 7398305 7398365 . - . Parent=GSCOCT00033125001 | |
| 3874 chr1 manual_curation exon 7398134 7398215 . - . Parent=GSCOCT00033125001 | |
| 3875 chr1 manual_curation exon 7397767 7397816 . - . Parent=GSCOCT00033125001 | |
| 3876 chr1 manual_curation exon 7396727 7396813 . - . Parent=GSCOCT00033125001 | |
| 3877 chr1 manual_curation exon 7396525 7396610 . - . Parent=GSCOCT00033125001 | |
| 3878 chr1 manual_curation exon 7396420 7396444 . - . Parent=GSCOCT00033125001 | |
| 3879 chr1 manual_curation exon 7394261 7394355 . - . Parent=GSCOCT00033125001 | |
| 3880 chr1 manual_curation exon 7394087 7394168 . - . Parent=GSCOCT00033125001 | |
| 3881 chr1 manual_curation exon 7393807 7393979 . - . Parent=GSCOCT00033125001 | |
| 3882 chr1 manual_curation exon 7392852 7392972 . - . Parent=GSCOCT00033125001 | |
| 3883 chr1 manual_curation exon 7391301 7391398 . - . Parent=GSCOCT00033125001 | |
| 3884 chr1 manual_curation exon 7391118 7391208 . - . Parent=GSCOCT00033125001 | |
| 3885 chr1 manual_curation exon 7390883 7391043 . - . Parent=GSCOCT00033125001 | |
| 3886 chr1 manual_curation exon 7390691 7390800 . - . Parent=GSCOCT00033125001 | |
| 3887 chr1 manual_curation exon 7389141 7389275 . - . Parent=GSCOCT00033125001 | |
| 3888 chr1 manual_curation exon 7388157 7388225 . - . Parent=GSCOCT00033125001 | |
| 3889 chr1 manual_curation exon 7387901 7388078 . - . Parent=GSCOCT00033125001 | |
| 3890 chr1 manual_curation exon 7387520 7387634 . - . Parent=GSCOCT00033125001 | |
| 3891 chr1 manual_curation exon 7386496 7386615 . - . Parent=GSCOCT00033125001 | |
| 3892 chr1 manual_curation exon 7385418 7385533 . - . Parent=GSCOCT00033125001 | |
| 3893 chr1 manual_curation exon 7385251 7385334 . - . Parent=GSCOCT00033125001 | |
| 3894 chr1 manual_curation exon 7385034 7385146 . - . Parent=GSCOCT00033125001 | |
| 3895 chr1 manual_curation exon 7383527 7383579 . - . Parent=GSCOCT00033125001 | |
| 3896 chr1 manual_curation exon 7383269 7383445 . - . Parent=GSCOCT00033125001 | |
| 3897 chr1 manual_curation exon 7381897 7381944 . - . Parent=GSCOCT00033125001 | |
| 3898 chr1 manual_curation exon 7381389 7381547 . - . Parent=GSCOCT00033125001 | |
| 3899 chr1 manual_curation exon 7380701 7380814 . - . Parent=GSCOCT00033125001 | |
| 3900 chr1 manual_curation exon 7380531 7380619 . - . Parent=GSCOCT00033125001 | |
| 3901 chr1 manual_curation exon 7380263 7380421 . - . Parent=GSCOCT00033125001 | |
| 3902 chr1 manual_curation exon 7380080 7380182 . - . Parent=GSCOCT00033125001 | |
| 3903 chr1 manual_curation exon 7378862 7378981 . - . Parent=GSCOCT00033125001 | |
| 3904 chr1 manual_curation exon 7377036 7377086 . - . Parent=GSCOCT00033125001 | |
| 3905 chr1 manual_curation exon 7376773 7376955 . - . Parent=GSCOCT00033125001 | |
| 3906 chr1 manual_curation exon 7375119 7375708 . - . Parent=GSCOCT00033125001 | |
| 3907 chr1 manual_curation CDS 7418341 7418542 . - 0 Parent=GSCOCT00033125001 | |
| 3908 chr1 manual_curation CDS 7415097 7415194 . - 1 Parent=GSCOCT00033125001 | |
| 3909 chr1 manual_curation CDS 7414295 7414458 . - 0 Parent=GSCOCT00033125001 | |
| 3910 chr1 manual_curation CDS 7413260 7413383 . - 2 Parent=GSCOCT00033125001 | |
| 3911 chr1 manual_curation CDS 7411955 7412065 . - 0 Parent=GSCOCT00033125001 | |
| 3912 chr1 manual_curation CDS 7411750 7411875 . - 0 Parent=GSCOCT00033125001 | |
| 3913 chr1 manual_curation CDS 7408633 7408722 . - 0 Parent=GSCOCT00033125001 | |
| 3914 chr1 manual_curation CDS 7407327 7407424 . - 0 Parent=GSCOCT00033125001 | |
| 3915 chr1 manual_curation CDS 7407082 7407199 . - 2 Parent=GSCOCT00033125001 | |
| 3916 chr1 manual_curation CDS 7406723 7406848 . - 0 Parent=GSCOCT00033125001 | |
| 3917 chr1 manual_curation CDS 7405302 7405378 . - 0 Parent=GSCOCT00033125001 | |
| 3918 chr1 manual_curation CDS 7405150 7405228 . - 2 Parent=GSCOCT00033125001 | |
| 3919 chr1 manual_curation CDS 7403566 7403688 . - 0 Parent=GSCOCT00033125001 | |
| 3920 chr1 manual_curation CDS 7401998 7402100 . - 0 Parent=GSCOCT00033125001 | |
| 3921 chr1 manual_curation CDS 7401062 7401185 . - 1 Parent=GSCOCT00033125001 | |
| 3922 chr1 manual_curation CDS 7400756 7400945 . - 2 Parent=GSCOCT00033125001 | |
| 3923 chr1 manual_curation CDS 7400603 7400655 . - 0 Parent=GSCOCT00033125001 | |
| 3924 chr1 manual_curation CDS 7398305 7398365 . - 2 Parent=GSCOCT00033125001 | |
| 3925 chr1 manual_curation CDS 7398134 7398215 . - 0 Parent=GSCOCT00033125001 | |
| 3926 chr1 manual_curation CDS 7397767 7397816 . - 1 Parent=GSCOCT00033125001 | |
| 3927 chr1 manual_curation CDS 7396727 7396813 . - 0 Parent=GSCOCT00033125001 | |
| 3928 chr1 manual_curation CDS 7396525 7396610 . - 0 Parent=GSCOCT00033125001 | |
| 3929 chr1 manual_curation CDS 7396420 7396444 . - 2 Parent=GSCOCT00033125001 | |
| 3930 chr1 manual_curation CDS 7394261 7394355 . - 0 Parent=GSCOCT00033125001 | |
| 3931 chr1 manual_curation CDS 7394087 7394168 . - 2 Parent=GSCOCT00033125001 | |
| 3932 chr1 manual_curation CDS 7393807 7393979 . - 0 Parent=GSCOCT00033125001 | |
| 3933 chr1 manual_curation CDS 7392852 7392972 . - 2 Parent=GSCOCT00033125001 | |
| 3934 chr1 manual_curation CDS 7391301 7391398 . - 0 Parent=GSCOCT00033125001 | |
| 3935 chr1 manual_curation CDS 7391118 7391208 . - 2 Parent=GSCOCT00033125001 | |
| 3936 chr1 manual_curation CDS 7390883 7391043 . - 0 Parent=GSCOCT00033125001 | |
| 3937 chr1 manual_curation CDS 7390691 7390800 . - 2 Parent=GSCOCT00033125001 | |
| 3938 chr1 manual_curation CDS 7389141 7389275 . - 1 Parent=GSCOCT00033125001 | |
| 3939 chr1 manual_curation CDS 7388157 7388225 . - 1 Parent=GSCOCT00033125001 | |
| 3940 chr1 manual_curation CDS 7387901 7388078 . - 1 Parent=GSCOCT00033125001 | |
| 3941 chr1 manual_curation CDS 7387520 7387634 . - 2 Parent=GSCOCT00033125001 | |
| 3942 chr1 manual_curation CDS 7386496 7386615 . - 0 Parent=GSCOCT00033125001 | |
| 3943 chr1 manual_curation CDS 7385418 7385533 . - 0 Parent=GSCOCT00033125001 | |
| 3944 chr1 manual_curation CDS 7385251 7385334 . - 2 Parent=GSCOCT00033125001 | |
| 3945 chr1 manual_curation CDS 7385034 7385146 . - 2 Parent=GSCOCT00033125001 | |
| 3946 chr1 manual_curation CDS 7383527 7383579 . - 1 Parent=GSCOCT00033125001 | |
| 3947 chr1 manual_curation CDS 7383269 7383445 . - 0 Parent=GSCOCT00033125001 | |
| 3948 chr1 manual_curation CDS 7381897 7381944 . - 0 Parent=GSCOCT00033125001 | |
| 3949 chr1 manual_curation CDS 7381389 7381547 . - 0 Parent=GSCOCT00033125001 | |
| 3950 chr1 manual_curation CDS 7380701 7380814 . - 0 Parent=GSCOCT00033125001 | |
| 3951 chr1 manual_curation CDS 7380531 7380619 . - 0 Parent=GSCOCT00033125001 | |
| 3952 chr1 manual_curation CDS 7380263 7380421 . - 2 Parent=GSCOCT00033125001 | |
| 3953 chr1 manual_curation CDS 7380080 7380182 . - 2 Parent=GSCOCT00033125001 | |
| 3954 chr1 manual_curation CDS 7378862 7378981 . - 0 Parent=GSCOCT00033125001 | |
| 3955 chr1 manual_curation CDS 7377036 7377086 . - 0 Parent=GSCOCT00033125001 | |
| 3956 chr1 manual_curation CDS 7376773 7376955 . - 0 Parent=GSCOCT00033125001 | |
| 3957 chr1 manual_curation CDS 7375472 7375708 . - 0 Parent=GSCOCT00033125001 | |
| 3958 chr1 manual_curation gene 7457282 7459595 . - . ID=GSCOCG00033124001;Name=Cc01_g03360 | |
| 3959 chr1 manual_curation mRNA 7457282 7459595 . - . ID=GSCOCT00033124001;Parent=GSCOCG00033124001;Name=Cc01_g03360 | |
| 3960 chr1 manual_curation polypeptide 7457509 7458846 . - . ID=GSCOCP00033124001;Dbxref=InterPro:IPR019378,PFAM:PF10250,TAIR:AT3G05320.1,TrEMBL:B9SZ16,TrEMBL:I1L0B3,TrEMBL:I1NDG1;Derives_from=GSCOCT00033124001;Name=Cc01_g03360;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:O-fucosyltransferase family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033124001~ O-fucosyltransferase family protein~ unknown_gene~ complete;original_location=1694882..1696219;owner=coffea | |
| 3961 chr1 manual_curation exon 7457282 7459595 . - . Parent=GSCOCT00033124001 | |
| 3962 chr1 manual_curation CDS 7457509 7458846 . - 0 Parent=GSCOCT00033124001 | |
| 3963 chr1 manual_curation gene 7588750 7591873 . - . ID=GSCOCG00033123001;Name=Cc01_g03370 | |
| 3964 chr1 manual_curation mRNA 7588750 7591873 . - . ID=GSCOCT00033123001;Parent=GSCOCG00033123001;Name=Cc01_g03370 | |
| 3965 chr1 manual_curation polypeptide 7588750 7591873 . - . ID=GSCOCP00033123001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008266,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00109,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:Q8VZG8,SwissProt:Q9LP24,SwissProt:Q9SHI2,TAIR:AT1G17230.1,TAIR:AT1G35710.1,TAIR:AT4G08850.1,TrEMBL:A5AR60,TrEMBL:B9ICP8,TrEMBL:G7ICI9;Derives_from=GSCOCT00033123001;Name=Cc01_g03370;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0004713,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At4g08850,CC_functional_completeness:complete,CC_gene:At4g08850,CC_gene:At1g35710,CC_gene:At1g17230;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033123001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At4g08850~ At4g08850~ complete;original_location=join(1561855..1562160%2C1562659..1563639%2C1563808..1563999%2C1564045..1564420%2C1564599..1564978);owner=coffea | |
| 3966 chr1 manual_curation exon 7591568 7591873 . - . Parent=GSCOCT00033123001 | |
| 3967 chr1 manual_curation exon 7590089 7591069 . - . Parent=GSCOCT00033123001 | |
| 3968 chr1 manual_curation exon 7589729 7589920 . - . Parent=GSCOCT00033123001 | |
| 3969 chr1 manual_curation exon 7589308 7589683 . - . Parent=GSCOCT00033123001 | |
| 3970 chr1 manual_curation exon 7588750 7589129 . - . Parent=GSCOCT00033123001 | |
| 3971 chr1 manual_curation CDS 7591568 7591873 . - 0 Parent=GSCOCT00033123001 | |
| 3972 chr1 manual_curation CDS 7590089 7591069 . - 0 Parent=GSCOCT00033123001 | |
| 3973 chr1 manual_curation CDS 7589729 7589920 . - 0 Parent=GSCOCT00033123001 | |
| 3974 chr1 manual_curation CDS 7589308 7589683 . - 0 Parent=GSCOCT00033123001 | |
| 3975 chr1 manual_curation CDS 7588750 7589129 . - 1 Parent=GSCOCT00033123001 | |
| 3976 chr1 manual_curation gene 7731821 7732431 . + . ID=GSCOCG00033120001;Name=Cc01_g03380 | |
| 3977 chr1 manual_curation mRNA 7731821 7732431 . + . ID=GSCOCT00033120001;Parent=GSCOCG00033120001;Name=Cc01_g03380 | |
| 3978 chr1 manual_curation polypeptide 7731821 7732431 . + . ID=GSCOCP00033120001;Dbxref=SwissProt:Q5HZ09,SwissProt:Q8GYL9,SwissProt:Q8GZ92,TAIR:AT1G54180.1,TAIR:AT3G14000.1,TAIR:AT5G20540.1,TrEMBL:B9S5S9,TrEMBL:C6TI58,TrEMBL:I1KH93;Derives_from=GSCOCT00033120001;Name=Cc01_g03380;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein Brevis radix-like 3,CC_functional_completeness:fragment,CC_gene:BRXL3,CC_gene:BRXL2,CC_gene:BRXL4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033120001~ Protein Brevis radix-like 3~ BRXL3~ fragment;original_location=complement(join(1421770..1421907%2C1421297..1421644));owner=coffea | |
| 3979 chr1 manual_curation exon 7732084 7732431 . + . Parent=GSCOCT00033120001 | |
| 3980 chr1 manual_curation exon 7731821 7731958 . + . Parent=GSCOCT00033120001 | |
| 3981 chr1 manual_curation CDS 7732084 7732431 . + 0 Parent=GSCOCT00033120001 | |
| 3982 chr1 manual_curation CDS 7731821 7731958 . + 0 Parent=GSCOCT00033120001 | |
| 3983 chr1 manual_curation gene 7804972 7805846 . - . ID=GSCOCG00033116001;Name=Cc01_g03390 | |
| 3984 chr1 manual_curation mRNA 7804972 7805846 . - . ID=GSCOCT00033116001;Parent=GSCOCG00033116001;Name=Cc01_g03390 | |
| 3985 chr1 manual_curation polypeptide 7804972 7805846 . - . ID=GSCOCP00033116001;Dbxref=TAIR:AT2G26560.1,TAIR:AT4G37050.1,TrEMBL:B9GUP3,TrEMBL:B9R7G5,TrEMBL:B9R7G6;Derives_from=GSCOCT00033116001;Name=Cc01_g03390;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033116001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(1347882..1348042%2C1348102..1348341%2C1348675..1348756);owner=coffea | |
| 3986 chr1 manual_curation exon 7805686 7805846 . - . Parent=GSCOCT00033116001 | |
| 3987 chr1 manual_curation exon 7805387 7805626 . - . Parent=GSCOCT00033116001 | |
| 3988 chr1 manual_curation exon 7804972 7805053 . - . Parent=GSCOCT00033116001 | |
| 3989 chr1 manual_curation CDS 7805686 7805846 . - 0 Parent=GSCOCT00033116001 | |
| 3990 chr1 manual_curation CDS 7805387 7805626 . - 2 Parent=GSCOCT00033116001 | |
| 3991 chr1 manual_curation CDS 7804972 7805053 . - 2 Parent=GSCOCT00033116001 | |
| 3992 chr1 manual_curation gene 7813967 7814750 . - . ID=GSCOCG00033114001;Name=Cc01_g03400 | |
| 3993 chr1 manual_curation mRNA 7813967 7814750 . - . ID=GSCOCT00033114001;Parent=GSCOCG00033114001;Name=Cc01_g03400 | |
| 3994 chr1 manual_curation polypeptide 7813967 7814750 . - . ID=GSCOCP00033114001;Dbxref=GENE3D:G3DSA:2.120.10.30,InterPro:IPR004141,InterPro:IPR011042,InterPro:IPR018119,PANTHER:PTHR10426,PFAM:PF03088,SwissProt:P68175,SwissProt:P92976,SwissProt:P94111,TAIR:AT1G74000.1,TAIR:AT1G74010.1,TAIR:AT1G74020.1,TrEMBL:A5AHV1,TrEMBL:F6GTG1,TrEMBL:G8E0P6;Derives_from=GSCOCT00033114001;Name=Cc01_g03400;Ontology_term=CC_evidence_code:ISS,GO:0009058,GO:0016844,CC_EC_number:4.3.3.2,PRODUCT:Putative Strictosidine synthase 1,CC_functional_completeness:fragment,CC_gene:SS1,CC_gene:SS3,CC_gene:STR1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033114001~ Putative Strictosidine synthase 1~ SS1~ fragment;original_location=join(1338978..1339010%2C1339076..1339185%2C1339278..1339761);owner=coffea | |
| 3995 chr1 manual_curation exon 7814718 7814750 . - . Parent=GSCOCT00033114001 | |
| 3996 chr1 manual_curation exon 7814543 7814652 . - . Parent=GSCOCT00033114001 | |
| 3997 chr1 manual_curation exon 7813967 7814450 . - . Parent=GSCOCT00033114001 | |
| 3998 chr1 manual_curation CDS 7814718 7814750 . - 0 Parent=GSCOCT00033114001 | |
| 3999 chr1 manual_curation CDS 7814543 7814652 . - 0 Parent=GSCOCT00033114001 | |
| 4000 chr1 manual_curation CDS 7813967 7814450 . - 2 Parent=GSCOCT00033114001 | |
| 4001 chr1 manual_curation gene 7825002 7826709 . - . ID=GSCOCG00033111001;Name=Cc01_g03410 | |
| 4002 chr1 manual_curation mRNA 7825002 7826709 . - . ID=GSCOCT00033111001;Parent=GSCOCG00033111001;Name=Cc01_g03410 | |
| 4003 chr1 manual_curation polypeptide 7825002 7826709 . - . ID=GSCOCP00033111001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR001547,InterPro:IPR013781,InterPro:IPR017853,PFAM:PF00150,SUPERFAMILY:SSF51445,SwissProt:O48540,SwissProt:Q6YM50,SwissProt:Q9FZ03,TAIR:AT3G10890.1,TAIR:AT5G01930.1,TAIR:AT5G66460.1,TrEMBL:A5B3T2,TrEMBL:F6GW23,TrEMBL:Q8H6B4;Derives_from=GSCOCT00033111001;Name=Cc01_g03410;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0043169,CC_EC_number:missing_EC_number,PRODUCT:Mannan endo-1%2C4-beta-mannosidase 5,CC_functional_completeness:complete,CC_gene:MAN5,CC_gene:MAN2,CC_gene:MAN1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033111001~ Mannan endo-1%2C4-beta-mannosidase 5~ MAN5~ complete;original_location=join(1327019..1327180%2C1327283..1327477%2C1327610..1327732%2C1327833..1328035%2C1328228..1328726);owner=coffea | |
| 4004 chr1 manual_curation exon 7826548 7826709 . - . Parent=GSCOCT00033111001 | |
| 4005 chr1 manual_curation exon 7826251 7826445 . - . Parent=GSCOCT00033111001 | |
| 4006 chr1 manual_curation exon 7825996 7826118 . - . Parent=GSCOCT00033111001 | |
| 4007 chr1 manual_curation exon 7825693 7825895 . - . Parent=GSCOCT00033111001 | |
| 4008 chr1 manual_curation exon 7825002 7825500 . - . Parent=GSCOCT00033111001 | |
| 4009 chr1 manual_curation CDS 7826548 7826709 . - 0 Parent=GSCOCT00033111001 | |
| 4010 chr1 manual_curation CDS 7826251 7826445 . - 0 Parent=GSCOCT00033111001 | |
| 4011 chr1 manual_curation CDS 7825996 7826118 . - 0 Parent=GSCOCT00033111001 | |
| 4012 chr1 manual_curation CDS 7825693 7825895 . - 0 Parent=GSCOCT00033111001 | |
| 4013 chr1 manual_curation CDS 7825002 7825500 . - 2 Parent=GSCOCT00033111001 | |
| 4014 chr1 manual_curation gene 7834567 7838584 . - . ID=GSCOCG00033110001;Name=Cc01_g03420 | |
| 4015 chr1 manual_curation mRNA 7834567 7838584 . - . ID=GSCOCT00033110001;Parent=GSCOCG00033110001;Name=Cc01_g03420 | |
| 4016 chr1 manual_curation polypeptide 7834567 7838584 . - . ID=GSCOCP00033110001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008266,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00109,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:O49545,SwissProt:Q8VZG8,SwissProt:Q9LP24,TAIR:AT1G35710.1,TAIR:AT4G08850.1,TAIR:AT5G65700.1,TrEMBL:B8A9B8,TrEMBL:F6HVC2,TrEMBL:Q9ZTJ6;Derives_from=GSCOCT00033110001;Name=Cc01_g03420;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0004713,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable leucine-rich repeat receptor-like protein kinase At1g35710,CC_functional_completeness:complete,CC_gene:At1g35710,CC_gene:BAM1,CC_gene:At4g08850;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033110001~ Putative Probable leucine-rich repeat receptor-like protein kinase At1g35710~ At1g35710~ complete;original_location=join(1315144..1315927%2C1316360..1316503%2C1316936..1317079%2C1317368..1317439%2C1317512..1318205%2C1318267..1318619%2C1318782..1319161);owner=coffea | |
| 4017 chr1 manual_curation exon 7837801 7838584 . - . Parent=GSCOCT00033110001 | |
| 4018 chr1 manual_curation exon 7837225 7837368 . - . Parent=GSCOCT00033110001 | |
| 4019 chr1 manual_curation exon 7836649 7836792 . - . Parent=GSCOCT00033110001 | |
| 4020 chr1 manual_curation exon 7836289 7836360 . - . Parent=GSCOCT00033110001 | |
| 4021 chr1 manual_curation exon 7835523 7836216 . - . Parent=GSCOCT00033110001 | |
| 4022 chr1 manual_curation exon 7835109 7835461 . - . Parent=GSCOCT00033110001 | |
| 4023 chr1 manual_curation exon 7834567 7834946 . - . Parent=GSCOCT00033110001 | |
| 4024 chr1 manual_curation CDS 7837801 7838584 . - 0 Parent=GSCOCT00033110001 | |
| 4025 chr1 manual_curation CDS 7837225 7837368 . - 1 Parent=GSCOCT00033110001 | |
| 4026 chr1 manual_curation CDS 7836649 7836792 . - 1 Parent=GSCOCT00033110001 | |
| 4027 chr1 manual_curation CDS 7836289 7836360 . - 1 Parent=GSCOCT00033110001 | |
| 4028 chr1 manual_curation CDS 7835523 7836216 . - 1 Parent=GSCOCT00033110001 | |
| 4029 chr1 manual_curation CDS 7835109 7835461 . - 2 Parent=GSCOCT00033110001 | |
| 4030 chr1 manual_curation CDS 7834567 7834946 . - 1 Parent=GSCOCT00033110001 | |
| 4031 chr1 manual_curation gene 7877424 7880893 . - . ID=GSCOCG00033108001;Name=Cc01_g03430 | |
| 4032 chr1 manual_curation mRNA 7877424 7880893 . - . ID=GSCOCT00033108001;Parent=GSCOCG00033108001;Name=Cc01_g03430 | |
| 4033 chr1 manual_curation polypeptide 7877424 7880893 . - . ID=GSCOCP00033108001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008266,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00109,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:Q8VZG8,SwissProt:Q9LP24,SwissProt:Q9SHI2,TAIR:AT1G17230.1,TAIR:AT1G35710.1,TAIR:AT4G08850.1,TrEMBL:B9I834,TrEMBL:B9ICP8,TrEMBL:I1J459;Derives_from=GSCOCT00033108001;Name=Cc01_g03430;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0004713,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At4g08850,CC_functional_completeness:complete,CC_gene:At4g08850,CC_gene:At1g35710,CC_gene:At1g17230;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033108001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At4g08850~ At4g08850~ complete;original_location=join(1272835..1273274%2C1274070..1275012%2C1275169..1275793%2C1275925..1276304);owner=coffea | |
| 4034 chr1 manual_curation exon 7880454 7880893 . - . Parent=GSCOCT00033108001 | |
| 4035 chr1 manual_curation exon 7878716 7879658 . - . Parent=GSCOCT00033108001 | |
| 4036 chr1 manual_curation exon 7877935 7878559 . - . Parent=GSCOCT00033108001 | |
| 4037 chr1 manual_curation exon 7877424 7877803 . - . Parent=GSCOCT00033108001 | |
| 4038 chr1 manual_curation CDS 7880454 7880893 . - 0 Parent=GSCOCT00033108001 | |
| 4039 chr1 manual_curation CDS 7878716 7879658 . - 2 Parent=GSCOCT00033108001 | |
| 4040 chr1 manual_curation CDS 7877935 7878559 . - 0 Parent=GSCOCT00033108001 | |
| 4041 chr1 manual_curation CDS 7877424 7877803 . - 1 Parent=GSCOCT00033108001 | |
| 4042 chr1 manual_curation gene 7884355 7887982 . - . ID=GSCOCG00033107001;Name=Cc01_g03440 | |
| 4043 chr1 manual_curation mRNA 7884355 7887982 . - . ID=GSCOCT00033107001;Parent=GSCOCG00033107001;Name=Cc01_g03440 | |
| 4044 chr1 manual_curation polypeptide 7884355 7887982 . - . ID=GSCOCP00033107001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008266,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00109,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:Q8VZG8,SwissProt:Q9LP24,SwissProt:Q9SHI2,TAIR:AT1G17230.1,TAIR:AT1G35710.1,TAIR:AT4G08850.1,TrEMBL:B9NDR5,TrEMBL:B9SAG6,TrEMBL:G7K7I9;Derives_from=GSCOCT00033107001;Name=Cc01_g03440;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0004713,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At4g08850,CC_functional_completeness:complete,CC_gene:At4g08850,CC_gene:At1g35710,CC_gene:At1g17230;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033107001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At4g08850~ At4g08850~ complete;original_location=join(1265746..1266068%2C1266333..1266911%2C1267404..1267744%2C1267886..1268815%2C1268994..1269373);owner=coffea | |
| 4045 chr1 manual_curation exon 7887660 7887982 . - . Parent=GSCOCT00033107001 | |
| 4046 chr1 manual_curation exon 7886817 7887395 . - . Parent=GSCOCT00033107001 | |
| 4047 chr1 manual_curation exon 7885984 7886324 . - . Parent=GSCOCT00033107001 | |
| 4048 chr1 manual_curation exon 7884913 7885842 . - . Parent=GSCOCT00033107001 | |
| 4049 chr1 manual_curation exon 7884355 7884734 . - . Parent=GSCOCT00033107001 | |
| 4050 chr1 manual_curation CDS 7887660 7887982 . - 0 Parent=GSCOCT00033107001 | |
| 4051 chr1 manual_curation CDS 7886817 7887395 . - 2 Parent=GSCOCT00033107001 | |
| 4052 chr1 manual_curation CDS 7885984 7886324 . - 2 Parent=GSCOCT00033107001 | |
| 4053 chr1 manual_curation CDS 7884913 7885842 . - 1 Parent=GSCOCT00033107001 | |
| 4054 chr1 manual_curation CDS 7884355 7884734 . - 1 Parent=GSCOCT00033107001 | |
| 4055 chr1 manual_curation gene 7935702 7939189 . - . ID=GSCOCG00033106001;Name=Cc01_g03450 | |
| 4056 chr1 manual_curation mRNA 7935702 7939189 . - . ID=GSCOCT00033106001;Parent=GSCOCG00033106001;Name=Cc01_g03450 | |
| 4057 chr1 manual_curation polypeptide 7935702 7939189 . - . ID=GSCOCP00033106001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008266,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00109,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:Q8VZG8,SwissProt:Q9LP24,SwissProt:Q9SHI2,TAIR:AT1G17230.1,TAIR:AT1G35710.1,TAIR:AT4G08850.1,TrEMBL:A5AR60,TrEMBL:B9NDR4,TrEMBL:G7ICH9;Derives_from=GSCOCT00033106001;Name=Cc01_g03450;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0004713,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At4g08850,CC_functional_completeness:complete,CC_gene:At4g08850,CC_gene:At1g35710,CC_gene:At1g17230;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033106001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At4g08850~ At4g08850~ complete;original_location=join(1214539..1215082%2C1215710..1217464%2C1217647..1218026);owner=coffea | |
| 4058 chr1 manual_curation exon 7938646 7939189 . - . Parent=GSCOCT00033106001 | |
| 4059 chr1 manual_curation exon 7936264 7938018 . - . Parent=GSCOCT00033106001 | |
| 4060 chr1 manual_curation exon 7935702 7936081 . - . Parent=GSCOCT00033106001 | |
| 4061 chr1 manual_curation CDS 7938646 7939189 . - 0 Parent=GSCOCT00033106001 | |
| 4062 chr1 manual_curation CDS 7936264 7938018 . - 1 Parent=GSCOCT00033106001 | |
| 4063 chr1 manual_curation CDS 7935702 7936081 . - 1 Parent=GSCOCT00033106001 | |
| 4064 chr1 manual_curation gene 7953141 7953494 . - . ID=GSCOCG00033104001;Name=Cc01_g03460 | |
| 4065 chr1 manual_curation mRNA 7953141 7953494 . - . ID=GSCOCT00033104001;Parent=GSCOCG00033104001;Name=Cc01_g03460 | |
| 4066 chr1 manual_curation polypeptide 7953141 7953494 . - . ID=GSCOCP00033104001;Dbxref=InterPro:IPR011009,InterPro:IPR017442,PFAM:PF00069,SUPERFAMILY:SSF56112,SwissProt:Q8VZG8,SwissProt:Q9LP24,TAIR:AT1G35710.1,TAIR:AT3G49670.1,TAIR:AT4G08850.1,TrEMBL:F6HV80,TrEMBL:G7K7I9,TrEMBL:G7KTF4;Derives_from=GSCOCT00033104001;Name=Cc01_g03460;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0005524,GO:0006468,CC_EC_number:missing_EC_number,PRODUCT:Putative Leucine-rich receptor-like protein kinase family protein,CC_functional_completeness:fragment,CC_gene:At4g08850,CC_gene:At1g35710;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033104001~ Putative Leucine-rich receptor-like protein kinase family protein~ At4g08850~ fragment;original_location=1200234..1200587;owner=coffea | |
| 4067 chr1 manual_curation exon 7953141 7953494 . - . Parent=GSCOCT00033104001 | |
| 4068 chr1 manual_curation CDS 7953141 7953494 . - 0 Parent=GSCOCT00033104001 | |
| 4069 chr1 manual_curation gene 7954497 7954646 . - . ID=GSCOCG00033102001;Name=Cc01_g03470 | |
| 4070 chr1 manual_curation mRNA 7954497 7954646 . - . ID=GSCOCT00033102001;Parent=GSCOCG00033102001;Name=Cc01_g03470 | |
| 4071 chr1 manual_curation polypeptide 7954497 7954646 . - . ID=GSCOCP00033102001;Dbxref=InterPro:IPR001611,PFAM:PF00560;Derives_from=GSCOCT00033102001;Name=Cc01_g03470;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033102001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1199082..1199231;owner=coffea | |
| 4072 chr1 manual_curation exon 7954497 7954646 . - . Parent=GSCOCT00033102001 | |
| 4073 chr1 manual_curation CDS 7954497 7954646 . - 0 Parent=GSCOCT00033102001 | |
| 4074 chr1 manual_curation gene 7954715 7956950 . - . ID=GSCOCG00033101001;Name=Cc01_g03480 | |
| 4075 chr1 manual_curation mRNA 7954715 7956950 . - . ID=GSCOCT00033101001;Parent=GSCOCG00033101001;Name=Cc01_g03480 | |
| 4076 chr1 manual_curation polypeptide 7954715 7956950 . - . ID=GSCOCP00033101001;Dbxref=InterPro:IPR001611,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SwissProt:C0LGQ5,SwissProt:Q8VZG8,SwissProt:Q9LP24,TAIR:AT1G35710.1,TAIR:AT4G08850.1,TAIR:AT5G56040.2,TrEMBL:B9I834,TrEMBL:B9ICP8,TrEMBL:B9N2E0;Derives_from=GSCOCT00033101001;Name=Cc01_g03480;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable leucine-rich repeat receptor-like protein kinase At1g35710,CC_functional_completeness:complete,CC_gene:At1g35710,CC_gene:At4g08850,CC_gene:GSO1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033101001~ Putative Probable leucine-rich repeat receptor-like protein kinase At1g35710~ At1g35710~ complete;original_location=join(1196778..1197214%2C1197986..1198166%2C1198421..1198468%2C1198620..1198896%2C1198976..1199013);owner=coffea | |
| 4077 chr1 manual_curation exon 7956514 7956950 . - . Parent=GSCOCT00033101001 | |
| 4078 chr1 manual_curation exon 7955562 7955742 . - . Parent=GSCOCT00033101001 | |
| 4079 chr1 manual_curation exon 7955260 7955307 . - . Parent=GSCOCT00033101001 | |
| 4080 chr1 manual_curation exon 7954832 7955108 . - . Parent=GSCOCT00033101001 | |
| 4081 chr1 manual_curation exon 7954715 7954752 . - . Parent=GSCOCT00033101001 | |
| 4082 chr1 manual_curation CDS 7956514 7956950 . - 0 Parent=GSCOCT00033101001 | |
| 4083 chr1 manual_curation CDS 7955562 7955742 . - 2 Parent=GSCOCT00033101001 | |
| 4084 chr1 manual_curation CDS 7955260 7955307 . - 0 Parent=GSCOCT00033101001 | |
| 4085 chr1 manual_curation CDS 7954832 7955108 . - 0 Parent=GSCOCT00033101001 | |
| 4086 chr1 manual_curation CDS 7954715 7954752 . - 1 Parent=GSCOCT00033101001 | |
| 4087 chr1 manual_curation gene 7970247 7973771 . - . ID=GSCOCG00033099001;Name=Cc01_g03490 | |
| 4088 chr1 manual_curation mRNA 7970247 7973771 . - . ID=GSCOCT00033099001;Parent=GSCOCG00033099001;Name=Cc01_g03490 | |
| 4089 chr1 manual_curation polypeptide 7970247 7973771 . - . ID=GSCOCP00033099001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008266,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00109,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:Q8VZG8,SwissProt:Q9LP24,SwissProt:Q9SHI2,TAIR:AT1G17230.1,TAIR:AT1G35710.1,TAIR:AT4G08850.1,TrEMBL:A5AR60,TrEMBL:B9NDR4,TrEMBL:B9NDR5;Derives_from=GSCOCT00033099001;Name=Cc01_g03490;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0004713,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At4g08850,CC_functional_completeness:complete,CC_gene:At4g08850,CC_gene:At1g35710,CC_gene:At1g17230;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033099001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At4g08850~ At4g08850~ complete;original_location=join(1179957..1180497%2C1181071..1182915%2C1183105..1183481);owner=coffea | |
| 4090 chr1 manual_curation exon 7973231 7973771 . - . Parent=GSCOCT00033099001 | |
| 4091 chr1 manual_curation exon 7970813 7972657 . - . Parent=GSCOCT00033099001 | |
| 4092 chr1 manual_curation exon 7970247 7970623 . - . Parent=GSCOCT00033099001 | |
| 4093 chr1 manual_curation CDS 7973231 7973771 . - 0 Parent=GSCOCT00033099001 | |
| 4094 chr1 manual_curation CDS 7970813 7972657 . - 1 Parent=GSCOCT00033099001 | |
| 4095 chr1 manual_curation CDS 7970247 7970623 . - 1 Parent=GSCOCT00033099001 | |
| 4096 chr1 manual_curation gene 8001530 8003134 . - . ID=GSCOCG00033098001;Name=Cc01_g03500 | |
| 4097 chr1 manual_curation mRNA 8001530 8003134 . - . ID=GSCOCT00033098001;Parent=GSCOCG00033098001;Name=Cc01_g03500 | |
| 4098 chr1 manual_curation polypeptide 8001530 8003134 . - . ID=GSCOCP00033098001;Dbxref=TAIR:AT2G33793.1,TrEMBL:B9H2V7,TrEMBL:B9RZ89,TrEMBL:I1KLJ4;Derives_from=GSCOCT00033098001;Name=Cc01_g03500;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B Has 35333 Blast hits to 34131 proteins in 2444 species,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033098001~ Putative unknown protein%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(1150594..1150715%2C1150800..1150889%2C1151192..1151236%2C1151415..1151540%2C1151678..1151769%2C1151930..1152021%2C1152112..1152198);owner=coffea | |
| 4099 chr1 manual_curation exon 8003013 8003134 . - . Parent=GSCOCT00033098001 | |
| 4100 chr1 manual_curation exon 8002839 8002928 . - . Parent=GSCOCT00033098001 | |
| 4101 chr1 manual_curation exon 8002492 8002536 . - . Parent=GSCOCT00033098001 | |
| 4102 chr1 manual_curation exon 8002188 8002313 . - . Parent=GSCOCT00033098001 | |
| 4103 chr1 manual_curation exon 8001959 8002050 . - . Parent=GSCOCT00033098001 | |
| 4104 chr1 manual_curation exon 8001707 8001798 . - . Parent=GSCOCT00033098001 | |
| 4105 chr1 manual_curation exon 8001530 8001616 . - . Parent=GSCOCT00033098001 | |
| 4106 chr1 manual_curation CDS 8003013 8003134 . - 0 Parent=GSCOCT00033098001 | |
| 4107 chr1 manual_curation CDS 8002839 8002928 . - 2 Parent=GSCOCT00033098001 | |
| 4108 chr1 manual_curation CDS 8002492 8002536 . - 2 Parent=GSCOCT00033098001 | |
| 4109 chr1 manual_curation CDS 8002188 8002313 . - 2 Parent=GSCOCT00033098001 | |
| 4110 chr1 manual_curation CDS 8001959 8002050 . - 2 Parent=GSCOCT00033098001 | |
| 4111 chr1 manual_curation CDS 8001707 8001798 . - 1 Parent=GSCOCT00033098001 | |
| 4112 chr1 manual_curation CDS 8001530 8001616 . - 0 Parent=GSCOCT00033098001 | |
| 4113 chr1 manual_curation gene 8021448 8023125 . - . ID=GSCOCG00033097001;Name=Cc01_g03510 | |
| 4114 chr1 manual_curation mRNA 8021448 8023125 . - . ID=GSCOCT00033097001;Parent=GSCOCG00033097001;Name=Cc01_g03510 | |
| 4115 chr1 manual_curation polypeptide 8021448 8023125 . - . ID=GSCOCP00033097001;Dbxref=InterPro:IPR002641,InterPro:IPR016035,PFAM:PF01734,SUPERFAMILY:SSF52151,SwissProt:P15478,SwissProt:Q2MY58,SwissProt:Q8LPW4,TAIR:AT2G26560.1,TAIR:AT4G37050.1,TAIR:AT4G37070.2,TrEMBL:A5AUQ2,TrEMBL:E0CP87,TrEMBL:F6H012;Derives_from=GSCOCT00033097001;Name=Cc01_g03510;Ontology_term=CC_evidence_code:ISS,GO:0006629,GO:0008152,CC_EC_number:missing_EC_number,PRODUCT:Patatin group A-3,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033097001~ Patatin group A-3~ unknown_gene~ complete;original_location=join(1130603..1130734%2C1130875..1131056%2C1131172..1131361%2C1131473..1131628%2C1131776..1132045%2C1132104..1132280);owner=coffea | |
| 4116 chr1 manual_curation exon 8022994 8023125 . - . Parent=GSCOCT00033097001 | |
| 4117 chr1 manual_curation exon 8022672 8022853 . - . Parent=GSCOCT00033097001 | |
| 4118 chr1 manual_curation exon 8022367 8022556 . - . Parent=GSCOCT00033097001 | |
| 4119 chr1 manual_curation exon 8022100 8022255 . - . Parent=GSCOCT00033097001 | |
| 4120 chr1 manual_curation exon 8021683 8021952 . - . Parent=GSCOCT00033097001 | |
| 4121 chr1 manual_curation exon 8021448 8021624 . - . Parent=GSCOCT00033097001 | |
| 4122 chr1 manual_curation CDS 8022994 8023125 . - 0 Parent=GSCOCT00033097001 | |
| 4123 chr1 manual_curation CDS 8022672 8022853 . - 0 Parent=GSCOCT00033097001 | |
| 4124 chr1 manual_curation CDS 8022367 8022556 . - 2 Parent=GSCOCT00033097001 | |
| 4125 chr1 manual_curation CDS 8022100 8022255 . - 0 Parent=GSCOCT00033097001 | |
| 4126 chr1 manual_curation CDS 8021683 8021952 . - 0 Parent=GSCOCT00033097001 | |
| 4127 chr1 manual_curation CDS 8021448 8021624 . - 0 Parent=GSCOCT00033097001 | |
| 4128 chr1 manual_curation gene 8046287 8047988 . - . ID=GSCOCG00033095001;Name=Cc01_g03520 | |
| 4129 chr1 manual_curation mRNA 8046287 8047988 . - . ID=GSCOCT00033095001;Parent=GSCOCG00033095001;Name=Cc01_g03520 | |
| 4130 chr1 manual_curation polypeptide 8046287 8047988 . - . ID=GSCOCP00033095001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR001547,InterPro:IPR013781,InterPro:IPR017853,PFAM:PF00150,SUPERFAMILY:SSF51445,SwissProt:O48540,SwissProt:Q6YM50,SwissProt:Q9FZ03,TAIR:AT3G10890.1,TAIR:AT5G01930.1,TAIR:AT5G66460.1,TrEMBL:A5B3T2,TrEMBL:F6GW23,TrEMBL:Q9FT02;Derives_from=GSCOCT00033095001;Name=Cc01_g03520;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0043169,CC_EC_number:missing_EC_number,PRODUCT:Mannan endo-1%2C4-beta-mannosidase 5,CC_functional_completeness:complete,CC_gene:MAN5,CC_gene:MAN2,CC_gene:MAN1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033095001~ Mannan endo-1%2C4-beta-mannosidase 5~ MAN5~ complete;original_location=join(1105740..1106102%2C1106205..1106376%2C1106411..1106452%2C1106539..1106657%2C1106762..1106964%2C1107165..1107441);owner=coffea | |
| 4131 chr1 manual_curation exon 8047626 8047988 . - . Parent=GSCOCT00033095001 | |
| 4132 chr1 manual_curation exon 8047352 8047523 . - . Parent=GSCOCT00033095001 | |
| 4133 chr1 manual_curation exon 8047276 8047317 . - . Parent=GSCOCT00033095001 | |
| 4134 chr1 manual_curation exon 8047071 8047189 . - . Parent=GSCOCT00033095001 | |
| 4135 chr1 manual_curation exon 8046764 8046966 . - . Parent=GSCOCT00033095001 | |
| 4136 chr1 manual_curation exon 8046287 8046563 . - . Parent=GSCOCT00033095001 | |
| 4137 chr1 manual_curation CDS 8047626 8047988 . - 0 Parent=GSCOCT00033095001 | |
| 4138 chr1 manual_curation CDS 8047352 8047523 . - 0 Parent=GSCOCT00033095001 | |
| 4139 chr1 manual_curation CDS 8047276 8047317 . - 1 Parent=GSCOCT00033095001 | |
| 4140 chr1 manual_curation CDS 8047071 8047189 . - 1 Parent=GSCOCT00033095001 | |
| 4141 chr1 manual_curation CDS 8046764 8046966 . - 0 Parent=GSCOCT00033095001 | |
| 4142 chr1 manual_curation CDS 8046287 8046563 . - 2 Parent=GSCOCT00033095001 | |
| 4143 chr1 manual_curation gene 8085878 8090051 . - . ID=GSCOCG00033094001;Name=Cc01_g03530 | |
| 4144 chr1 manual_curation mRNA 8085878 8090051 . - . ID=GSCOCT00033094001;Parent=GSCOCG00033094001;Name=Cc01_g03530 | |
| 4145 chr1 manual_curation polypeptide 8085878 8090051 . - . ID=GSCOCP00033094001;Dbxref=TAIR:AT2G33793.1,TrEMBL:B9H2V7,TrEMBL:B9RZ89,TrEMBL:I1KLJ4;Derives_from=GSCOCT00033094001;Name=Cc01_g03530;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B Has 35333 Blast hits to 34131 proteins in 2444 species,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033094001~ unknown protein%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(1063677..1063750%2C1064687..1064746%2C1064900..1064939%2C1065028..1065121%2C1067446..1067505%2C1067582..1067673%2C1067764..1067850);owner=coffea | |
| 4146 chr1 manual_curation exon 8089978 8090051 . - . Parent=GSCOCT00033094001 | |
| 4147 chr1 manual_curation exon 8088982 8089041 . - . Parent=GSCOCT00033094001 | |
| 4148 chr1 manual_curation exon 8088789 8088828 . - . Parent=GSCOCT00033094001 | |
| 4149 chr1 manual_curation exon 8088607 8088700 . - . Parent=GSCOCT00033094001 | |
| 4150 chr1 manual_curation exon 8086223 8086282 . - . Parent=GSCOCT00033094001 | |
| 4151 chr1 manual_curation exon 8086055 8086146 . - . Parent=GSCOCT00033094001 | |
| 4152 chr1 manual_curation exon 8085878 8085964 . - . Parent=GSCOCT00033094001 | |
| 4153 chr1 manual_curation CDS 8089978 8090051 . - 0 Parent=GSCOCT00033094001 | |
| 4154 chr1 manual_curation CDS 8088982 8089041 . - 2 Parent=GSCOCT00033094001 | |
| 4155 chr1 manual_curation CDS 8088789 8088828 . - 2 Parent=GSCOCT00033094001 | |
| 4156 chr1 manual_curation CDS 8088607 8088700 . - 0 Parent=GSCOCT00033094001 | |
| 4157 chr1 manual_curation CDS 8086223 8086282 . - 1 Parent=GSCOCT00033094001 | |
| 4158 chr1 manual_curation CDS 8086055 8086146 . - 1 Parent=GSCOCT00033094001 | |
| 4159 chr1 manual_curation CDS 8085878 8085964 . - 0 Parent=GSCOCT00033094001 | |
| 4160 chr1 manual_curation gene 8135739 8138800 . - . ID=GSCOCG00033092001;Name=Cc01_g03540 | |
| 4161 chr1 manual_curation mRNA 8135739 8138800 . - . ID=GSCOCT00033092001;Parent=GSCOCG00033092001;Name=Cc01_g03540 | |
| 4162 chr1 manual_curation polypeptide 8135739 8138800 . - . ID=GSCOCP00033092001;Dbxref=InterPro:IPR002641,InterPro:IPR016035,PFAM:PF01734,SUPERFAMILY:SSF52151,SwissProt:P15478,SwissProt:Q2MY58,SwissProt:Q3YJT2,TAIR:AT2G26560.1,TAIR:AT4G37050.1,TAIR:AT4G37070.2,TrEMBL:E0CP87,TrEMBL:F6H012,TrEMBL:Q29VI1;Derives_from=GSCOCT00033092001;Name=Cc01_g03540;Ontology_term=CC_evidence_code:ISS,GO:0006629,GO:0008152,CC_EC_number:missing_EC_number,PRODUCT:Patatin group A-3,CC_functional_completeness:complete,CC_gene:pat2-k2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033092001~ Patatin group A-3~ pat2-k2~ complete;original_location=join(1014928..1015059%2C1015200..1015380%2C1015531..1015682%2C1016686..1016847%2C1016962..1017264%2C1017402..1017574%2C1017908..1017989);owner=coffea | |
| 4163 chr1 manual_curation exon 8138669 8138800 . - . Parent=GSCOCT00033092001 | |
| 4164 chr1 manual_curation exon 8138348 8138528 . - . Parent=GSCOCT00033092001 | |
| 4165 chr1 manual_curation exon 8138046 8138197 . - . Parent=GSCOCT00033092001 | |
| 4166 chr1 manual_curation exon 8136881 8137042 . - . Parent=GSCOCT00033092001 | |
| 4167 chr1 manual_curation exon 8136464 8136766 . - . Parent=GSCOCT00033092001 | |
| 4168 chr1 manual_curation exon 8136154 8136326 . - . Parent=GSCOCT00033092001 | |
| 4169 chr1 manual_curation exon 8135739 8135820 . - . Parent=GSCOCT00033092001 | |
| 4170 chr1 manual_curation CDS 8138669 8138800 . - 0 Parent=GSCOCT00033092001 | |
| 4171 chr1 manual_curation CDS 8138348 8138528 . - 0 Parent=GSCOCT00033092001 | |
| 4172 chr1 manual_curation CDS 8138046 8138197 . - 1 Parent=GSCOCT00033092001 | |
| 4173 chr1 manual_curation CDS 8136881 8137042 . - 0 Parent=GSCOCT00033092001 | |
| 4174 chr1 manual_curation CDS 8136464 8136766 . - 0 Parent=GSCOCT00033092001 | |
| 4175 chr1 manual_curation CDS 8136154 8136326 . - 0 Parent=GSCOCT00033092001 | |
| 4176 chr1 manual_curation CDS 8135739 8135820 . - 2 Parent=GSCOCT00033092001 | |
| 4177 chr1 manual_curation gene 8141271 8203458 . - . ID=GSCOCG00033091001;Name=Cc01_g03550 | |
| 4178 chr1 manual_curation mRNA 8141271 8203458 . - . ID=GSCOCT00033091001;Parent=GSCOCG00033091001;Name=Cc01_g03550 | |
| 4179 chr1 manual_curation polypeptide 8141271 8203458 . - . ID=GSCOCP00033091001;Dbxref=GENE3D:G3DSA:3.30.730.10,InterPro:IPR000719,InterPro:IPR001471,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008266,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR016177,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PFAM:PF00847,PFAM:PF08263,PRINTS:PR00367,PROFILE:PS50011,PROFILE:PS51032,PROSITE:PS00107,PROSITE:PS00109,SMART:SM00219,SMART:SM00220,SMART:SM00369,SMART:SM00380,SUPERFAMILY:SSF54171,SUPERFAMILY:SSF56112,SwissProt:Q8VZG8,SwissProt:Q9LP24,SwissProt:Q9SHI2,TAIR:AT1G17230.1,TAIR:AT1G35710.1,TAIR:AT4G08850.1,TrEMBL:A5AR60,TrEMBL:G7K7I9,TrEMBL:I1J488;Derives_from=GSCOCT00033091001;Name=Cc01_g03550;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,GO:0004672,GO:0004674,GO:0004713,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At4g08850,CC_functional_completeness:complete,CC_gene:At4g08850,CC_gene:At1g35710,CC_gene:At1g17230;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033091001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At4g08850~ At4g08850~ complete;original_location=join(950270..950655%2C950740..951370%2C951662..952351%2C952439..953051%2C1012165..1012457);owner=coffea | |
| 4180 chr1 manual_curation exon 8203073 8203458 . - . Parent=GSCOCT00033091001 | |
| 4181 chr1 manual_curation exon 8202358 8202988 . - . Parent=GSCOCT00033091001 | |
| 4182 chr1 manual_curation exon 8201377 8202066 . - . Parent=GSCOCT00033091001 | |
| 4183 chr1 manual_curation exon 8200677 8201289 . - . Parent=GSCOCT00033091001 | |
| 4184 chr1 manual_curation exon 8141271 8141563 . - . Parent=GSCOCT00033091001 | |
| 4185 chr1 manual_curation CDS 8203073 8203458 . - 0 Parent=GSCOCT00033091001 | |
| 4186 chr1 manual_curation CDS 8202358 8202988 . - 2 Parent=GSCOCT00033091001 | |
| 4187 chr1 manual_curation CDS 8201377 8202066 . - 0 Parent=GSCOCT00033091001 | |
| 4188 chr1 manual_curation CDS 8200677 8201289 . - 0 Parent=GSCOCT00033091001 | |
| 4189 chr1 manual_curation CDS 8141271 8141563 . - 1 Parent=GSCOCT00033091001 | |
| 4190 chr1 manual_curation gene 8218175 8219528 . - . ID=GSCOCG00033088001;Name=Cc01_g03560 | |
| 4191 chr1 manual_curation mRNA 8218175 8219528 . - . ID=GSCOCT00033088001;Parent=GSCOCG00033088001;Name=Cc01_g03560 | |
| 4192 chr1 manual_curation polypeptide 8218175 8219528 . - . ID=GSCOCP00033088001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,PFAM:PF00560,SMART:SM00369,SwissProt:Q8VZG8,SwissProt:Q9LP24,SwissProt:Q9SHI2,TAIR:AT1G17230.1,TAIR:AT1G35710.1,TAIR:AT4G08850.1,TrEMBL:B9NDR4,TrEMBL:B9NDR5,TrEMBL:F6HYL7;Derives_from=GSCOCT00033088001;Name=Cc01_g03560;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At4g08850,CC_functional_completeness:complete,CC_gene:At4g08850,CC_gene:At1g35710,CC_gene:At1g17230;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033088001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At4g08850~ At4g08850~ complete;original_location=join(934200..934467%2C934524..934796%2C934871..935553);owner=coffea | |
| 4193 chr1 manual_curation exon 8219261 8219528 . - . Parent=GSCOCT00033088001 | |
| 4194 chr1 manual_curation exon 8218932 8219204 . - . Parent=GSCOCT00033088001 | |
| 4195 chr1 manual_curation exon 8218175 8218857 . - . Parent=GSCOCT00033088001 | |
| 4196 chr1 manual_curation CDS 8219261 8219528 . - 0 Parent=GSCOCT00033088001 | |
| 4197 chr1 manual_curation CDS 8218932 8219204 . - 1 Parent=GSCOCT00033088001 | |
| 4198 chr1 manual_curation CDS 8218175 8218857 . - 1 Parent=GSCOCT00033088001 | |
| 4199 chr1 manual_curation gene 8302588 8305158 . - . ID=GSCOCG00033085001;Name=Cc01_g03570 | |
| 4200 chr1 manual_curation mRNA 8302588 8305158 . - . ID=GSCOCT00033085001;Parent=GSCOCG00033085001;Name=Cc01_g03570 | |
| 4201 chr1 manual_curation polypeptide 8302588 8305158 . - . ID=GSCOCP00033085001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008266,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00109,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:Q8VZG8,SwissProt:Q9LP24,SwissProt:Q9SHI2,TAIR:AT1G17230.1,TAIR:AT1G35710.1,TAIR:AT4G08850.1,TrEMBL:B9SAG6,TrEMBL:F6HYL7,TrEMBL:G7IBH4;Derives_from=GSCOCT00033085001;Name=Cc01_g03570;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0004713,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At4g08850,CC_functional_completeness:complete,CC_gene:At4g08850,CC_gene:At1g35710,CC_gene:At1g17230;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033085001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At4g08850~ At4g08850~ complete;original_location=join(848570..850580%2C850761..851140);owner=coffea | |
| 4202 chr1 manual_curation exon 8303148 8305158 . - . Parent=GSCOCT00033085001 | |
| 4203 chr1 manual_curation exon 8302588 8302967 . - . Parent=GSCOCT00033085001 | |
| 4204 chr1 manual_curation CDS 8303148 8305158 . - 0 Parent=GSCOCT00033085001 | |
| 4205 chr1 manual_curation CDS 8302588 8302967 . - 1 Parent=GSCOCT00033085001 | |
| 4206 chr1 manual_curation gene 8310906 8314135 . + . ID=GSCOCG00033084001;Name=Cc01_g03580 | |
| 4207 chr1 manual_curation mRNA 8310906 8314135 . + . ID=GSCOCT00033084001;Parent=GSCOCG00033084001;Name=Cc01_g03580 | |
| 4208 chr1 manual_curation polypeptide 8311179 8313651 . + . ID=GSCOCP00033084001;Dbxref=InterPro:IPR001911,PFAM:PF01165,TAIR:AT3G26360.1,TIGRFAMs:TIGR00030,TrEMBL:B9SVN0,TrEMBL:D7TR92,TrEMBL:F4JCI2;Derives_from=GSCOCT00033084001;Name=Cc01_g03580;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:Ribosomal protein S21 family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033084001~ Ribosomal protein S21 family protein~ unknown_gene~ complete;original_location=complement(join(842239..842549%2C840077..840086));owner=coffea | |
| 4209 chr1 manual_curation exon 8310906 8311032 . + . Parent=GSCOCT00033084001 | |
| 4210 chr1 manual_curation exon 8313642 8314135 . + . Parent=GSCOCT00033084001 | |
| 4211 chr1 manual_curation exon 8311155 8311489 . + . Parent=GSCOCT00033084001 | |
| 4212 chr1 manual_curation CDS 8313642 8313651 . + 2 Parent=GSCOCT00033084001 | |
| 4213 chr1 manual_curation CDS 8311179 8311489 . + 0 Parent=GSCOCT00033084001 | |
| 4214 chr1 manual_curation gene 8335178 8349720 . - . ID=GSCOCG00033083001;Name=Cc01_g03590 | |
| 4215 chr1 manual_curation mRNA 8335178 8349720 . - . ID=GSCOCT00033083001;Parent=GSCOCG00033083001;Name=Cc01_g03590 | |
| 4216 chr1 manual_curation polypeptide 8335825 8349647 . - . ID=GSCOCP00033083001;Dbxref=InterPro:IPR002421,InterPro:IPR008918,InterPro:IPR020045,InterPro:IPR020046,InterPro:IPR020047,PFAM:PF01367,PFAM:PF02739,SMART:SM00279,SMART:SM00475,SUPERFAMILY:SSF47807,SwissProt:P52026,SwissProt:Q04957,SwissProt:Q1RH76,TAIR:AT1G34380.2,TAIR:AT3G52050.3,TrEMBL:D7T2D6,TrEMBL:Q10PN8,TrEMBL:Q10PN9;Derives_from=GSCOCT00033083001;Name=Cc01_g03590;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003824,GO:0008409,CC_EC_number:missing_EC_number,PRODUCT:5'-3' CDSuclease family protein,CC_functional_completeness:complete,CC_gene:polA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033083001~ 5'-3' CDSuclease family protein~ polA~ complete;original_location=join(804081..804233%2C804349..804598%2C805249..805328%2C805588..805626%2C806999..807017%2C808537..808590%2C811110..811237%2C811312..811380%2C811888..811973%2C813596..813705%2C815050..815100%2C815912..815970%2C816185..816233%2C816281..816378%2C817775..817903);owner=coffea | |
| 4217 chr1 manual_curation exon 8349495 8349720 . - . Parent=GSCOCT00033083001 | |
| 4218 chr1 manual_curation exon 8349130 8349379 . - . Parent=GSCOCT00033083001 | |
| 4219 chr1 manual_curation exon 8348400 8348479 . - . Parent=GSCOCT00033083001 | |
| 4220 chr1 manual_curation exon 8348102 8348140 . - . Parent=GSCOCT00033083001 | |
| 4221 chr1 manual_curation exon 8346711 8346729 . - . Parent=GSCOCT00033083001 | |
| 4222 chr1 manual_curation exon 8345138 8345191 . - . Parent=GSCOCT00033083001 | |
| 4223 chr1 manual_curation exon 8342491 8342618 . - . Parent=GSCOCT00033083001 | |
| 4224 chr1 manual_curation exon 8342348 8342416 . - . Parent=GSCOCT00033083001 | |
| 4225 chr1 manual_curation exon 8341755 8341840 . - . Parent=GSCOCT00033083001 | |
| 4226 chr1 manual_curation exon 8340023 8340132 . - . Parent=GSCOCT00033083001 | |
| 4227 chr1 manual_curation exon 8338628 8338678 . - . Parent=GSCOCT00033083001 | |
| 4228 chr1 manual_curation exon 8337758 8337816 . - . Parent=GSCOCT00033083001 | |
| 4229 chr1 manual_curation exon 8337495 8337543 . - . Parent=GSCOCT00033083001 | |
| 4230 chr1 manual_curation exon 8337350 8337447 . - . Parent=GSCOCT00033083001 | |
| 4231 chr1 manual_curation exon 8335178 8335953 . - . Parent=GSCOCT00033083001 | |
| 4232 chr1 manual_curation CDS 8349495 8349647 . - 0 Parent=GSCOCT00033083001 | |
| 4233 chr1 manual_curation CDS 8349130 8349379 . - 0 Parent=GSCOCT00033083001 | |
| 4234 chr1 manual_curation CDS 8348400 8348479 . - 1 Parent=GSCOCT00033083001 | |
| 4235 chr1 manual_curation CDS 8348102 8348140 . - 0 Parent=GSCOCT00033083001 | |
| 4236 chr1 manual_curation CDS 8346711 8346729 . - 0 Parent=GSCOCT00033083001 | |
| 4237 chr1 manual_curation CDS 8345138 8345191 . - 1 Parent=GSCOCT00033083001 | |
| 4238 chr1 manual_curation CDS 8342491 8342618 . - 1 Parent=GSCOCT00033083001 | |
| 4239 chr1 manual_curation CDS 8342348 8342416 . - 0 Parent=GSCOCT00033083001 | |
| 4240 chr1 manual_curation CDS 8341755 8341840 . - 0 Parent=GSCOCT00033083001 | |
| 4241 chr1 manual_curation CDS 8340023 8340132 . - 2 Parent=GSCOCT00033083001 | |
| 4242 chr1 manual_curation CDS 8338628 8338678 . - 1 Parent=GSCOCT00033083001 | |
| 4243 chr1 manual_curation CDS 8337758 8337816 . - 1 Parent=GSCOCT00033083001 | |
| 4244 chr1 manual_curation CDS 8337495 8337543 . - 0 Parent=GSCOCT00033083001 | |
| 4245 chr1 manual_curation CDS 8337350 8337447 . - 1 Parent=GSCOCT00033083001 | |
| 4246 chr1 manual_curation CDS 8335825 8335953 . - 0 Parent=GSCOCT00033083001 | |
| 4247 chr1 manual_curation gene 8393453 8395480 . + . ID=GSCOCG00033081001;Name=Cc01_g03600 | |
| 4248 chr1 manual_curation mRNA 8393453 8395480 . + . ID=GSCOCT00033081001;Parent=GSCOCG00033081001;Name=Cc01_g03600 | |
| 4249 chr1 manual_curation polypeptide 8393623 8395275 . + . ID=GSCOCP00033081001;Dbxref=InterPro:IPR000915,InterPro:IPR005568,PANTHER:PTHR10715,PFAM:PF01159,PFAM:PF03868,SwissProt:P34091,SwissProt:Q9C9C5,SwissProt:Q9C9C6,TAIR:AT1G18540.1,TAIR:AT1G74050.1,TAIR:AT1G74060.1,TrEMBL:B7FH28,TrEMBL:B7FH81,TrEMBL:B9SFN3;Derives_from=GSCOCT00033081001;Name=Cc01_g03600;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:60S ribosomal protein L6,CC_functional_completeness:complete,CC_gene:RPL6,CC_gene:RPL6C,CC_gene:RPL6B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033081001~ 60S ribosomal protein L6~ RPL6~ complete;original_location=complement(join(759927..760105%2C759706..759812%2C758721..758902%2C758453..758608));owner=coffea | |
| 4250 chr1 manual_curation exon 8395120 8395480 . + . Parent=GSCOCT00033081001 | |
| 4251 chr1 manual_curation exon 8394826 8395007 . + . Parent=GSCOCT00033081001 | |
| 4252 chr1 manual_curation exon 8393916 8394022 . + . Parent=GSCOCT00033081001 | |
| 4253 chr1 manual_curation exon 8393453 8393801 . + . Parent=GSCOCT00033081001 | |
| 4254 chr1 manual_curation CDS 8395120 8395275 . + 0 Parent=GSCOCT00033081001 | |
| 4255 chr1 manual_curation CDS 8394826 8395007 . + 1 Parent=GSCOCT00033081001 | |
| 4256 chr1 manual_curation CDS 8393916 8394022 . + 2 Parent=GSCOCT00033081001 | |
| 4257 chr1 manual_curation CDS 8393623 8393801 . + 0 Parent=GSCOCT00033081001 | |
| 4258 chr1 manual_curation gene 8395918 8417268 . - . ID=GSCOCG00033080001;Name=Cc01_g03610 | |
| 4259 chr1 manual_curation mRNA 8395918 8417268 . - . ID=GSCOCT00033080001;Parent=GSCOCG00033080001;Name=Cc01_g03610 | |
| 4260 chr1 manual_curation polypeptide 8396470 8416261 . - . ID=GSCOCP00033080001;Dbxref=InterPro:IPR003440,InterPro:IPR006745,PFAM:PF02364,PFAM:PF04652,SwissProt:Q9AUE0,SwissProt:Q9LXT9,SwissProt:Q9SL03,TAIR:AT1G05570.1,TAIR:AT2G31960.1,TAIR:AT5G13000.1,TrEMBL:B9GLL4,TrEMBL:B9SQ55,TrEMBL:F6GUE7;Derives_from=GSCOCT00033080001;Name=Cc01_g03610;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:2.4.1.34,PRODUCT:Callose synthase 3,CC_functional_completeness:complete,CC_gene:CALS3,CC_gene:CALS1,CC_gene:CALS2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033080001~ Callose synthase 3~ CALS3~ complete;original_location=join(737467..737659%2C739219..739319%2C740276..740400%2C740508..740601%2C740731..740841%2C740925..741041%2C741207..741299%2C741969..742060%2C742385..742511%2C743089..743226%2C743307..743383%2C743464..743551%2C744700..744819%2C744912..745029%2C745810..746144%2C746241..746293%2C746376..746436%2C747390..747471%2C747553..747602%2C747727..747813%2C748434..748571%2C748688..748782%2C748942..749026%2C749843..750003%2C750098..750221%2C750342..750439%2C750521..750650%2C750744..750895%2C751539..751648%2C751731..751856%2C752086..752154%2C752301..752487%2C752564..752717%2C753065..753184%2C753260..753378%2C753479..753562%2C754421..754533%2C754630..754859%2C755013..755810%2C755898..755948%2C756299..756484%2C757010..757258);owner=coffea | |
| 4261 chr1 manual_curation exon 8416069 8417268 . - . Parent=GSCOCT00033080001 | |
| 4262 chr1 manual_curation exon 8414409 8414509 . - . Parent=GSCOCT00033080001 | |
| 4263 chr1 manual_curation exon 8413328 8413452 . - . Parent=GSCOCT00033080001 | |
| 4264 chr1 manual_curation exon 8413127 8413220 . - . Parent=GSCOCT00033080001 | |
| 4265 chr1 manual_curation exon 8412887 8412997 . - . Parent=GSCOCT00033080001 | |
| 4266 chr1 manual_curation exon 8412687 8412803 . - . Parent=GSCOCT00033080001 | |
| 4267 chr1 manual_curation exon 8412429 8412521 . - . Parent=GSCOCT00033080001 | |
| 4268 chr1 manual_curation exon 8411668 8411759 . - . Parent=GSCOCT00033080001 | |
| 4269 chr1 manual_curation exon 8411217 8411343 . - . Parent=GSCOCT00033080001 | |
| 4270 chr1 manual_curation exon 8410502 8410639 . - . Parent=GSCOCT00033080001 | |
| 4271 chr1 manual_curation exon 8410345 8410421 . - . Parent=GSCOCT00033080001 | |
| 4272 chr1 manual_curation exon 8410177 8410264 . - . Parent=GSCOCT00033080001 | |
| 4273 chr1 manual_curation exon 8408909 8409028 . - . Parent=GSCOCT00033080001 | |
| 4274 chr1 manual_curation exon 8408699 8408816 . - . Parent=GSCOCT00033080001 | |
| 4275 chr1 manual_curation exon 8407584 8407918 . - . Parent=GSCOCT00033080001 | |
| 4276 chr1 manual_curation exon 8407435 8407487 . - . Parent=GSCOCT00033080001 | |
| 4277 chr1 manual_curation exon 8407292 8407352 . - . Parent=GSCOCT00033080001 | |
| 4278 chr1 manual_curation exon 8406257 8406338 . - . Parent=GSCOCT00033080001 | |
| 4279 chr1 manual_curation exon 8406126 8406175 . - . Parent=GSCOCT00033080001 | |
| 4280 chr1 manual_curation exon 8405915 8406001 . - . Parent=GSCOCT00033080001 | |
| 4281 chr1 manual_curation exon 8405157 8405294 . - . Parent=GSCOCT00033080001 | |
| 4282 chr1 manual_curation exon 8404946 8405040 . - . Parent=GSCOCT00033080001 | |
| 4283 chr1 manual_curation exon 8404702 8404786 . - . Parent=GSCOCT00033080001 | |
| 4284 chr1 manual_curation exon 8403725 8403885 . - . Parent=GSCOCT00033080001 | |
| 4285 chr1 manual_curation exon 8403507 8403630 . - . Parent=GSCOCT00033080001 | |
| 4286 chr1 manual_curation exon 8403289 8403386 . - . Parent=GSCOCT00033080001 | |
| 4287 chr1 manual_curation exon 8403078 8403207 . - . Parent=GSCOCT00033080001 | |
| 4288 chr1 manual_curation exon 8402833 8402984 . - . Parent=GSCOCT00033080001 | |
| 4289 chr1 manual_curation exon 8402080 8402189 . - . Parent=GSCOCT00033080001 | |
| 4290 chr1 manual_curation exon 8401872 8401997 . - . Parent=GSCOCT00033080001 | |
| 4291 chr1 manual_curation exon 8401574 8401642 . - . Parent=GSCOCT00033080001 | |
| 4292 chr1 manual_curation exon 8401241 8401427 . - . Parent=GSCOCT00033080001 | |
| 4293 chr1 manual_curation exon 8401011 8401164 . - . Parent=GSCOCT00033080001 | |
| 4294 chr1 manual_curation exon 8400544 8400663 . - . Parent=GSCOCT00033080001 | |
| 4295 chr1 manual_curation exon 8400350 8400468 . - . Parent=GSCOCT00033080001 | |
| 4296 chr1 manual_curation exon 8400166 8400249 . - . Parent=GSCOCT00033080001 | |
| 4297 chr1 manual_curation exon 8399195 8399307 . - . Parent=GSCOCT00033080001 | |
| 4298 chr1 manual_curation exon 8398869 8399098 . - . Parent=GSCOCT00033080001 | |
| 4299 chr1 manual_curation exon 8397918 8398715 . - . Parent=GSCOCT00033080001 | |
| 4300 chr1 manual_curation exon 8397780 8397830 . - . Parent=GSCOCT00033080001 | |
| 4301 chr1 manual_curation exon 8397244 8397429 . - . Parent=GSCOCT00033080001 | |
| 4302 chr1 manual_curation exon 8395918 8396718 . - . Parent=GSCOCT00033080001 | |
| 4303 chr1 manual_curation CDS 8416069 8416261 . - 0 Parent=GSCOCT00033080001 | |
| 4304 chr1 manual_curation CDS 8414409 8414509 . - 1 Parent=GSCOCT00033080001 | |
| 4305 chr1 manual_curation CDS 8413328 8413452 . - 0 Parent=GSCOCT00033080001 | |
| 4306 chr1 manual_curation CDS 8413127 8413220 . - 2 Parent=GSCOCT00033080001 | |
| 4307 chr1 manual_curation CDS 8412887 8412997 . - 0 Parent=GSCOCT00033080001 | |
| 4308 chr1 manual_curation CDS 8412687 8412803 . - 0 Parent=GSCOCT00033080001 | |
| 4309 chr1 manual_curation CDS 8412429 8412521 . - 0 Parent=GSCOCT00033080001 | |
| 4310 chr1 manual_curation CDS 8411668 8411759 . - 0 Parent=GSCOCT00033080001 | |
| 4311 chr1 manual_curation CDS 8411217 8411343 . - 2 Parent=GSCOCT00033080001 | |
| 4312 chr1 manual_curation CDS 8410502 8410639 . - 0 Parent=GSCOCT00033080001 | |
| 4313 chr1 manual_curation CDS 8410345 8410421 . - 0 Parent=GSCOCT00033080001 | |
| 4314 chr1 manual_curation CDS 8410177 8410264 . - 2 Parent=GSCOCT00033080001 | |
| 4315 chr1 manual_curation CDS 8408909 8409028 . - 0 Parent=GSCOCT00033080001 | |
| 4316 chr1 manual_curation CDS 8408699 8408816 . - 0 Parent=GSCOCT00033080001 | |
| 4317 chr1 manual_curation CDS 8407584 8407918 . - 1 Parent=GSCOCT00033080001 | |
| 4318 chr1 manual_curation CDS 8407435 8407487 . - 0 Parent=GSCOCT00033080001 | |
| 4319 chr1 manual_curation CDS 8407292 8407352 . - 2 Parent=GSCOCT00033080001 | |
| 4320 chr1 manual_curation CDS 8406257 8406338 . - 0 Parent=GSCOCT00033080001 | |
| 4321 chr1 manual_curation CDS 8406126 8406175 . - 1 Parent=GSCOCT00033080001 | |
| 4322 chr1 manual_curation CDS 8405915 8406001 . - 0 Parent=GSCOCT00033080001 | |
| 4323 chr1 manual_curation CDS 8405157 8405294 . - 0 Parent=GSCOCT00033080001 | |
| 4324 chr1 manual_curation CDS 8404946 8405040 . - 0 Parent=GSCOCT00033080001 | |
| 4325 chr1 manual_curation CDS 8404702 8404786 . - 2 Parent=GSCOCT00033080001 | |
| 4326 chr1 manual_curation CDS 8403725 8403885 . - 0 Parent=GSCOCT00033080001 | |
| 4327 chr1 manual_curation CDS 8403507 8403630 . - 2 Parent=GSCOCT00033080001 | |
| 4328 chr1 manual_curation CDS 8403289 8403386 . - 0 Parent=GSCOCT00033080001 | |
| 4329 chr1 manual_curation CDS 8403078 8403207 . - 2 Parent=GSCOCT00033080001 | |
| 4330 chr1 manual_curation CDS 8402833 8402984 . - 0 Parent=GSCOCT00033080001 | |
| 4331 chr1 manual_curation CDS 8402080 8402189 . - 2 Parent=GSCOCT00033080001 | |
| 4332 chr1 manual_curation CDS 8401872 8401997 . - 1 Parent=GSCOCT00033080001 | |
| 4333 chr1 manual_curation CDS 8401574 8401642 . - 1 Parent=GSCOCT00033080001 | |
| 4334 chr1 manual_curation CDS 8401241 8401427 . - 1 Parent=GSCOCT00033080001 | |
| 4335 chr1 manual_curation CDS 8401011 8401164 . - 2 Parent=GSCOCT00033080001 | |
| 4336 chr1 manual_curation CDS 8400544 8400663 . - 0 Parent=GSCOCT00033080001 | |
| 4337 chr1 manual_curation CDS 8400350 8400468 . - 0 Parent=GSCOCT00033080001 | |
| 4338 chr1 manual_curation CDS 8400166 8400249 . - 2 Parent=GSCOCT00033080001 | |
| 4339 chr1 manual_curation CDS 8399195 8399307 . - 2 Parent=GSCOCT00033080001 | |
| 4340 chr1 manual_curation CDS 8398869 8399098 . - 1 Parent=GSCOCT00033080001 | |
| 4341 chr1 manual_curation CDS 8397918 8398715 . - 0 Parent=GSCOCT00033080001 | |
| 4342 chr1 manual_curation CDS 8397780 8397830 . - 0 Parent=GSCOCT00033080001 | |
| 4343 chr1 manual_curation CDS 8397244 8397429 . - 0 Parent=GSCOCT00033080001 | |
| 4344 chr1 manual_curation CDS 8396470 8396718 . - 0 Parent=GSCOCT00033080001 | |
| 4345 chr1 manual_curation gene 8543708 8550688 . + . ID=GSCOCG00033076001;Name=Cc01_g03620 | |
| 4346 chr1 manual_curation mRNA 8543708 8550688 . + . ID=GSCOCT00033076001;Parent=GSCOCG00033076001;Name=Cc01_g03620 | |
| 4347 chr1 manual_curation polypeptide 8543989 8550259 . + . ID=GSCOCP00033076001;Dbxref=InterPro:IPR000806,InterPro:IPR002005,InterPro:IPR018203,PANTHER:PTHR11787,PFAM:PF00996,PRINTS:PR00891,PRINTS:PR00892,SwissProt:O97555,SwissProt:P21856,SwissProt:P50398,TAIR:AT2G44100.1,TAIR:AT3G59920.1,TAIR:AT5G09550.1,TrEMBL:B9RIY3,TrEMBL:O22402,TrEMBL:Q2VCK0;Derives_from=GSCOCT00033076001;Name=Cc01_g03620;Ontology_term=CC_evidence_code:ISS,GO:0005093,GO:0015031,GO:0043087,CC_EC_number:missing_EC_number,PRODUCT:Rab GDP dissociation inhibitor alpha,CC_functional_completeness:complete,CC_gene:Gdi1,CC_gene:GDI1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033076001~ Rab GDP dissociation inhibitor alpha~ Gdi1~ complete;original_location=complement(join(609653..609739%2C608515..608577%2C608351..608434%2C608132..608239%2C607863..608035%2C607565..607676%2C607378..607458%2C607137..607199%2C606891..606992%2C606550..606674%2C605803..606013%2C605642..605716%2C603469..603519));owner=coffea | |
| 4348 chr1 manual_curation exon 8550209 8550688 . + . Parent=GSCOCT00033076001 | |
| 4349 chr1 manual_curation exon 8548012 8548086 . + . Parent=GSCOCT00033076001 | |
| 4350 chr1 manual_curation exon 8547715 8547925 . + . Parent=GSCOCT00033076001 | |
| 4351 chr1 manual_curation exon 8547054 8547178 . + . Parent=GSCOCT00033076001 | |
| 4352 chr1 manual_curation exon 8546736 8546837 . + . Parent=GSCOCT00033076001 | |
| 4353 chr1 manual_curation exon 8546529 8546591 . + . Parent=GSCOCT00033076001 | |
| 4354 chr1 manual_curation exon 8546270 8546350 . + . Parent=GSCOCT00033076001 | |
| 4355 chr1 manual_curation exon 8546052 8546163 . + . Parent=GSCOCT00033076001 | |
| 4356 chr1 manual_curation exon 8545693 8545865 . + . Parent=GSCOCT00033076001 | |
| 4357 chr1 manual_curation exon 8545489 8545596 . + . Parent=GSCOCT00033076001 | |
| 4358 chr1 manual_curation exon 8545294 8545377 . + . Parent=GSCOCT00033076001 | |
| 4359 chr1 manual_curation exon 8545151 8545213 . + . Parent=GSCOCT00033076001 | |
| 4360 chr1 manual_curation exon 8543708 8544075 . + . Parent=GSCOCT00033076001 | |
| 4361 chr1 manual_curation CDS 8550209 8550259 . + 0 Parent=GSCOCT00033076001 | |
| 4362 chr1 manual_curation CDS 8548012 8548086 . + 0 Parent=GSCOCT00033076001 | |
| 4363 chr1 manual_curation CDS 8547715 8547925 . + 2 Parent=GSCOCT00033076001 | |
| 4364 chr1 manual_curation CDS 8547054 8547178 . + 0 Parent=GSCOCT00033076001 | |
| 4365 chr1 manual_curation CDS 8546736 8546837 . + 0 Parent=GSCOCT00033076001 | |
| 4366 chr1 manual_curation CDS 8546529 8546591 . + 0 Parent=GSCOCT00033076001 | |
| 4367 chr1 manual_curation CDS 8546270 8546350 . + 0 Parent=GSCOCT00033076001 | |
| 4368 chr1 manual_curation CDS 8546052 8546163 . + 2 Parent=GSCOCT00033076001 | |
| 4369 chr1 manual_curation CDS 8545693 8545865 . + 0 Parent=GSCOCT00033076001 | |
| 4370 chr1 manual_curation CDS 8545489 8545596 . + 0 Parent=GSCOCT00033076001 | |
| 4371 chr1 manual_curation CDS 8545294 8545377 . + 0 Parent=GSCOCT00033076001 | |
| 4372 chr1 manual_curation CDS 8545151 8545213 . + 0 Parent=GSCOCT00033076001 | |
| 4373 chr1 manual_curation CDS 8543989 8544075 . + 0 Parent=GSCOCT00033076001 | |
| 4374 chr1 manual_curation gene 8561313 8569111 . + . ID=GSCOCG00033075001;Name=Cc01_g03630 | |
| 4375 chr1 manual_curation mRNA 8561313 8569111 . + . ID=GSCOCT00033075001;Parent=GSCOCG00033075001;Name=Cc01_g03630 | |
| 4376 chr1 manual_curation polypeptide 8561313 8569111 . + . ID=GSCOCP00033075001;Dbxref=InterPro:IPR003613,InterPro:IPR016024,PFAM:PF04564,SMART:SM00504,SUPERFAMILY:SSF48371,SwissProt:C6L7U1,SwissProt:D1FP53,SwissProt:D1FP57,TAIR:AT1G23030.1,TAIR:AT1G29340.1,TAIR:AT3G06880.2,TrEMBL:A5AFC6,TrEMBL:B9GYK6,TrEMBL:D7SLC9;Derives_from=GSCOCT00033075001;Name=Cc01_g03630;Ontology_term=CC_evidence_code:ISS,GO:0000151,GO:0004842,GO:0005488,GO:0016567,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:CERBERUS,CC_gene:LIN;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033075001~ Putative uncharacterized protein~ CERBERUS~ complete;original_location=complement(join(592180..592415%2C590663..592092%2C589885..590094%2C589007..589607%2C587550..587694%2C586173..586430%2C585281..585599%2C584617..584729));owner=coffea | |
| 4377 chr1 manual_curation exon 8568999 8569111 . + . Parent=GSCOCT00033075001 | |
| 4378 chr1 manual_curation exon 8568129 8568447 . + . Parent=GSCOCT00033075001 | |
| 4379 chr1 manual_curation exon 8567298 8567555 . + . Parent=GSCOCT00033075001 | |
| 4380 chr1 manual_curation exon 8566034 8566178 . + . Parent=GSCOCT00033075001 | |
| 4381 chr1 manual_curation exon 8564121 8564721 . + . Parent=GSCOCT00033075001 | |
| 4382 chr1 manual_curation exon 8563634 8563843 . + . Parent=GSCOCT00033075001 | |
| 4383 chr1 manual_curation exon 8561636 8563065 . + . Parent=GSCOCT00033075001 | |
| 4384 chr1 manual_curation exon 8561313 8561548 . + . Parent=GSCOCT00033075001 | |
| 4385 chr1 manual_curation CDS 8568999 8569111 . + 1 Parent=GSCOCT00033075001 | |
| 4386 chr1 manual_curation CDS 8568129 8568447 . + 0 Parent=GSCOCT00033075001 | |
| 4387 chr1 manual_curation CDS 8567298 8567555 . + 0 Parent=GSCOCT00033075001 | |
| 4388 chr1 manual_curation CDS 8566034 8566178 . + 2 Parent=GSCOCT00033075001 | |
| 4389 chr1 manual_curation CDS 8564121 8564721 . + 1 Parent=GSCOCT00033075001 | |
| 4390 chr1 manual_curation CDS 8563634 8563843 . + 1 Parent=GSCOCT00033075001 | |
| 4391 chr1 manual_curation CDS 8561636 8563065 . + 2 Parent=GSCOCT00033075001 | |
| 4392 chr1 manual_curation CDS 8561313 8561548 . + 0 Parent=GSCOCT00033075001 | |
| 4393 chr1 manual_curation gene 8632871 8633458 . + . ID=GSCOCG00033074001;Name=Cc01_g03640 | |
| 4394 chr1 manual_curation mRNA 8632871 8633458 . + . ID=GSCOCT00033074001;Parent=GSCOCG00033074001;Name=Cc01_g03640 | |
| 4395 chr1 manual_curation polypeptide 8632871 8633458 . + . ID=GSCOCP00033074001;Dbxref=InterPro:IPR021914,PFAM:PF12041,SwissProt:Q6EI05,SwissProt:Q6EI06,SwissProt:Q8S4W7,TAIR:AT1G14920.1,TAIR:AT1G66350.1,TAIR:AT2G01570.1,TrEMBL:A5BH60,TrEMBL:B9SP75,TrEMBL:F6HFG4;Derives_from=GSCOCT00033074001;Name=Cc01_g03640;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:GAI1,CC_gene:GAIP,CC_gene:GAIPB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033074001~ Hypothetical protein~ GAI1~ missing_functional_completeness;original_location=complement(520270..520857);owner=coffea | |
| 4396 chr1 manual_curation exon 8632871 8633458 . + . Parent=GSCOCT00033074001 | |
| 4397 chr1 manual_curation CDS 8632871 8633458 . + 0 Parent=GSCOCT00033074001 | |
| 4398 chr1 manual_curation gene 8712063 8713356 . - . ID=GSCOCG00033072001;Name=Cc01_g03650 | |
| 4399 chr1 manual_curation mRNA 8712063 8713356 . - . ID=GSCOCT00033072001;Parent=GSCOCG00033072001;Name=Cc01_g03650 | |
| 4400 chr1 manual_curation polypeptide 8712063 8713187 . - . ID=GSCOCP00033072001;Dbxref=InterPro:IPR005804,InterPro:IPR021863,PFAM:PF00487,PFAM:PF11960,SwissProt:P46313,SwissProt:P48630,SwissProt:P48631,TAIR:AT3G11170.1,TAIR:AT3G12120.1,TAIR:AT5G05580.1,TrEMBL:F2YFG0,TrEMBL:Q4QWZ1,TrEMBL:Q9LLL7;Derives_from=GSCOCT00033072001;Name=Cc01_g03650;Ontology_term=CC_evidence_code:ISS,GO:0006629,GO:0016491,GO:0055114,CC_EC_number:1.14.99.33,PRODUCT:Omega-6 fatty acid desaturase%2C endoplasmic reticulum isozyme 2,CC_functional_completeness:complete,CC_gene:FAD2-2,CC_gene:FAD2,CC_gene:FAD2-1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033072001~ Omega-6 fatty acid desaturase%2C endoplasmic reticulum isozyme 2~ FAD2-2~ complete;original_location=440541..441665;owner=coffea | |
| 4401 chr1 manual_curation exon 8712063 8713356 . - . Parent=GSCOCT00033072001 | |
| 4402 chr1 manual_curation CDS 8712063 8713187 . - 0 Parent=GSCOCT00033072001 | |
| 4403 chr1 manual_curation gene 8850478 8851926 . - . ID=GSCOCG00033067001;Name=Cc01_g03660 | |
| 4404 chr1 manual_curation mRNA 8850478 8851926 . - . ID=GSCOCT00033067001;Parent=GSCOCG00033067001;Name=Cc01_g03660 | |
| 4405 chr1 manual_curation polypeptide 8851417 8851926 . - . ID=GSCOCP00033067001;Dbxref=InterPro:IPR003480,PFAM:PF02458,SwissProt:Q8GT20,SwissProt:Q8GT21,SwissProt:Q9SRQ2,TAIR:AT2G40230.1,TAIR:AT3G03480.1,TAIR:AT5G17540.1,TrEMBL:B9GZG2,TrEMBL:C9E0G4,TrEMBL:Q2PF15;Derives_from=GSCOCT00033067001;Name=Cc01_g03660;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.3.1.162,PRODUCT:Benzyl alcohol O-benzoyltransferase,CC_functional_completeness:fragment,CC_gene:HSR201,CC_gene:CHAT;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033067001~ Benzyl alcohol O-benzoyltransferase~ HSR201~ fragment;original_location=301802..302311;owner=coffea | |
| 4406 chr1 manual_curation exon 8850478 8851926 . - . Parent=GSCOCT00033067001 | |
| 4407 chr1 manual_curation CDS 8851417 8851926 . - 0 Parent=GSCOCT00033067001 | |
| 4408 chr1 manual_curation gene 8854951 8855406 . + . ID=GSCOCG00033066001;Name=Cc01_g03670 | |
| 4409 chr1 manual_curation mRNA 8854951 8855406 . + . ID=GSCOCT00033066001;Parent=GSCOCG00033066001;Name=Cc01_g03670 | |
| 4410 chr1 manual_curation polypeptide 8854951 8855406 . + . ID=GSCOCP00033066001;Dbxref=InterPro:IPR000589,InterPro:IPR009068,InterPro:IPR012606,PFAM:PF00312,PFAM:PF08069,PROSITE:PS00362,SUPERFAMILY:SSF47060,SwissProt:P59223,SwissProt:P59224,SwissProt:P62302,TAIR:AT3G60770.1,TAIR:AT4G00100.1,TrEMBL:A5B3K9,TrEMBL:B9RDA6,TrEMBL:Q9MAV9;Derives_from=GSCOCT00033066001;Name=Cc01_g03670;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:40S ribosomal protein S13,CC_functional_completeness:complete,CC_gene:RPS13,CC_gene:RPS13B,CC_gene:RPS13A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033066001~ 40S ribosomal protein S13~ RPS13~ complete;original_location=complement(298322..298777);owner=coffea | |
| 4411 chr1 manual_curation exon 8854951 8855406 . + . Parent=GSCOCT00033066001 | |
| 4412 chr1 manual_curation CDS 8854951 8855406 . + 0 Parent=GSCOCT00033066001 | |
| 4413 chr1 manual_curation gene 8868183 8869311 . - . ID=GSCOCG00033065001;Name=Cc01_g03680 | |
| 4414 chr1 manual_curation mRNA 8868183 8869311 . - . ID=GSCOCT00033065001;Parent=GSCOCG00033065001;Name=Cc01_g03680 | |
| 4415 chr1 manual_curation polypeptide 8868183 8869311 . - . ID=GSCOCP00033065001;Dbxref=InterPro:IPR005804,InterPro:IPR021863,PFAM:PF00487,PFAM:PF11960,SwissProt:P46313,SwissProt:P48630,SwissProt:P48631,TAIR:AT2G29980.1,TAIR:AT3G12120.1,TAIR:AT5G05580.1,TrEMBL:D2CM01,TrEMBL:F2YFG0,TrEMBL:Q4QWZ1;Derives_from=GSCOCT00033065001;Name=Cc01_g03680;Ontology_term=CC_evidence_code:ISS,GO:0006629,GO:0016491,GO:0055114,CC_EC_number:1.14.99.33,PRODUCT:Omega-6 fatty acid desaturase%2C endoplasmic reticulum isozyme 2,CC_functional_completeness:complete,CC_gene:FAD2-2,CC_gene:FAD2-1,CC_gene:FAD2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033065001~ Omega-6 fatty acid desaturase%2C endoplasmic reticulum isozyme 2~ FAD2-2~ complete;original_location=join(284417..284683%2C284763..285545);owner=coffea | |
| 4416 chr1 manual_curation exon 8869045 8869311 . - . Parent=GSCOCT00033065001 | |
| 4417 chr1 manual_curation exon 8868183 8868965 . - . Parent=GSCOCT00033065001 | |
| 4418 chr1 manual_curation CDS 8869045 8869311 . - 0 Parent=GSCOCT00033065001 | |
| 4419 chr1 manual_curation CDS 8868183 8868965 . - 0 Parent=GSCOCT00033065001 | |
| 4420 chr1 manual_curation gene 8907941 8911950 . + . ID=GSCOCG00033064001;Name=Cc01_g03690 | |
| 4421 chr1 manual_curation mRNA 8907941 8911950 . + . ID=GSCOCT00033064001;Parent=GSCOCG00033064001;Name=Cc01_g03690 | |
| 4422 chr1 manual_curation polypeptide 8907941 8911838 . + . ID=GSCOCP00033064001;Derives_from=GSCOCT00033064001;Name=Cc01_g03690;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033064001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(245731..245787%2C243113..243187%2C241890..241982));owner=coffea | |
| 4423 chr1 manual_curation exon 8911746 8911950 . + . Parent=GSCOCT00033064001 | |
| 4424 chr1 manual_curation exon 8910541 8910615 . + . Parent=GSCOCT00033064001 | |
| 4425 chr1 manual_curation exon 8907941 8907997 . + . Parent=GSCOCT00033064001 | |
| 4426 chr1 manual_curation CDS 8911746 8911838 . + 0 Parent=GSCOCT00033064001 | |
| 4427 chr1 manual_curation CDS 8910541 8910615 . + 0 Parent=GSCOCT00033064001 | |
| 4428 chr1 manual_curation CDS 8907941 8907997 . + 0 Parent=GSCOCT00033064001 | |
| 4429 chr1 manual_curation gene 8933561 8936458 . + . ID=GSCOCG00033062001;Name=Cc01_g03700 | |
| 4430 chr1 manual_curation mRNA 8933561 8936458 . + . ID=GSCOCT00033062001;Parent=GSCOCG00033062001;Name=Cc01_g03700 | |
| 4431 chr1 manual_curation polypeptide 8933561 8936458 . + . ID=GSCOCP00033062001;Dbxref=InterPro:IPR003480,PFAM:PF02458,SwissProt:Q5H873,SwissProt:Q8GT20,SwissProt:Q8GT21,TAIR:AT3G03480.1,TAIR:AT5G17540.1,TAIR:AT5G41040.1,TrEMBL:B9GZG2,TrEMBL:F6HBX5,TrEMBL:Q6E593;Derives_from=GSCOCT00033062001;Name=Cc01_g03700;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.3.1.162,PRODUCT:Putative Benzyl alcohol O-benzoyltransferase,CC_functional_completeness:complete,CC_gene:HSR201,CC_gene:HMT/HLT;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033062001~ Putative Benzyl alcohol O-benzoyltransferase~ HSR201~ complete;original_location=complement(join(219736..220167%2C217270..218217));owner=coffea | |
| 4432 chr1 manual_curation exon 8935511 8936458 . + . Parent=GSCOCT00033062001 | |
| 4433 chr1 manual_curation exon 8933561 8933992 . + . Parent=GSCOCT00033062001 | |
| 4434 chr1 manual_curation CDS 8935511 8936458 . + 0 Parent=GSCOCT00033062001 | |
| 4435 chr1 manual_curation CDS 8933561 8933992 . + 0 Parent=GSCOCT00033062001 | |
| 4436 chr1 manual_curation gene 9016080 9021232 . - . ID=GSCOCG00033057001;Name=Cc01_g03710 | |
| 4437 chr1 manual_curation mRNA 9016080 9021232 . - . ID=GSCOCT00033057001;Parent=GSCOCG00033057001;Name=Cc01_g03710 | |
| 4438 chr1 manual_curation polypeptide 9016080 9021232 . - . ID=GSCOCP00033057001;Derives_from=GSCOCT00033057001;Name=Cc01_g03710;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033057001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(132496..132742%2C137345..137364%2C137466..137648);owner=coffea | |
| 4439 chr1 manual_curation exon 9020986 9021232 . - . Parent=GSCOCT00033057001 | |
| 4440 chr1 manual_curation exon 9016364 9016383 . - . Parent=GSCOCT00033057001 | |
| 4441 chr1 manual_curation exon 9016080 9016262 . - . Parent=GSCOCT00033057001 | |
| 4442 chr1 manual_curation CDS 9020986 9021232 . - 0 Parent=GSCOCT00033057001 | |
| 4443 chr1 manual_curation CDS 9016364 9016383 . - 1 Parent=GSCOCT00033057001 | |
| 4444 chr1 manual_curation CDS 9016080 9016262 . - 0 Parent=GSCOCT00033057001 | |
| 4445 chr1 manual_curation gene 9093790 9096074 . - . ID=GSCOCG00033054001;Name=Cc01_g03720 | |
| 4446 chr1 manual_curation mRNA 9093790 9096074 . - . ID=GSCOCT00033054001;Parent=GSCOCG00033054001;Name=Cc01_g03720 | |
| 4447 chr1 manual_curation polypeptide 9093790 9095628 . - . ID=GSCOCP00033054001;Dbxref=GENE3D:G3DSA:2.60.120.10,InterPro:IPR000526,InterPro:IPR011051,InterPro:IPR014710,PFAM:PF02041,PRINTS:PR00655,SUPERFAMILY:SSF51182,SwissProt:P33488,SwissProt:P33490,SwissProt:P33491,TAIR:AT4G02980.1,TrEMBL:B5TGQ0,TrEMBL:B6VB01,TrEMBL:I1JFD3;Derives_from=GSCOCT00033054001;Name=Cc01_g03720;Ontology_term=CC_evidence_code:ISS,GO:0004872,GO:0005788,CC_EC_number:missing_EC_number,PRODUCT:Auxin-binding protein T85,CC_functional_completeness:fragment,CC_gene:T85,CC_gene:T92,CC_gene:ABP4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033054001~ Auxin-binding protein T85~ T85~ fragment;original_location=join(58100..58138%2C58248..58451%2C58912..58979%2C59830..59938);owner=coffea | |
| 4448 chr1 manual_curation exon 9095590 9096074 . - . Parent=GSCOCT00033054001 | |
| 4449 chr1 manual_curation exon 9095277 9095480 . - . Parent=GSCOCT00033054001 | |
| 4450 chr1 manual_curation exon 9094749 9094816 . - . Parent=GSCOCT00033054001 | |
| 4451 chr1 manual_curation exon 9093790 9093898 . - . Parent=GSCOCT00033054001 | |
| 4452 chr1 manual_curation CDS 9095590 9095628 . - 0 Parent=GSCOCT00033054001 | |
| 4453 chr1 manual_curation CDS 9095277 9095480 . - 0 Parent=GSCOCT00033054001 | |
| 4454 chr1 manual_curation CDS 9094749 9094816 . - 0 Parent=GSCOCT00033054001 | |
| 4455 chr1 manual_curation CDS 9093790 9093898 . - 2 Parent=GSCOCT00033054001 | |
| 4456 chr1 manual_curation gene 9096509 9100034 . + . ID=GSCOCG00033053001;Name=Cc01_g03730 | |
| 4457 chr1 manual_curation mRNA 9096509 9100034 . + . ID=GSCOCT00033053001;Parent=GSCOCG00033053001;Name=Cc01_g03730 | |
| 4458 chr1 manual_curation polypeptide 9096509 9100034 . + . ID=GSCOCP00033053001;Dbxref=GENE3D:G3DSA:3.30.1390.20,InterPro:IPR016082,PFAM:PF00327,SUPERFAMILY:SSF55129,SwissProt:P60039,SwissProt:P60040,SwissProt:Q9LHP1,TAIR:AT2G01250.1,TAIR:AT2G44120.2,TAIR:AT3G13580.3,TrEMBL:F6GXJ2,TrEMBL:I1L1F3,TrEMBL:I1MH48;Derives_from=GSCOCT00033053001;Name=Cc01_g03730;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:60S ribosomal protein L7-2,CC_functional_completeness:fragment,CC_gene:RPL7B,CC_gene:RPL7C,CC_gene:RPL7D;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033053001~ 60S ribosomal protein L7-2~ RPL7B~ fragment;original_location=complement(join(57103..57219%2C56129..56157%2C53694..53946));owner=coffea | |
| 4459 chr1 manual_curation exon 9099782 9100034 . + . Parent=GSCOCT00033053001 | |
| 4460 chr1 manual_curation exon 9097571 9097599 . + . Parent=GSCOCT00033053001 | |
| 4461 chr1 manual_curation exon 9096509 9096625 . + . Parent=GSCOCT00033053001 | |
| 4462 chr1 manual_curation CDS 9099782 9100034 . + 2 Parent=GSCOCT00033053001 | |
| 4463 chr1 manual_curation CDS 9097571 9097599 . + 0 Parent=GSCOCT00033053001 | |
| 4464 chr1 manual_curation CDS 9096509 9096625 . + 0 Parent=GSCOCT00033053001 | |
| 4465 chr1 manual_curation gene 9148320 9149051 . - . ID=GSCOCG00033052001;Name=Cc01_g03740 | |
| 4466 chr1 manual_curation mRNA 9148320 9149051 . - . ID=GSCOCT00033052001;Parent=GSCOCG00033052001;Name=Cc01_g03740 | |
| 4467 chr1 manual_curation polypeptide 9148320 9149051 . - . ID=GSCOCP00033052001;Dbxref=InterPro:IPR013744,PFAM:PF08538,TAIR:AT5G19050.1,TrEMBL:B9HMD0,TrEMBL:F6HDL3,TrEMBL:I1H2M8;Derives_from=GSCOCT00033052001;Name=Cc01_g03740;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:alpha/beta-Hydrolases superfamily protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033052001~ alpha/beta-Hydrolases superfamily protein~ unknown_gene~ fragment;original_location=join(4677..4796%2C5027..5118%2C5261..5330%2C5385..5408);owner=coffea | |
| 4468 chr1 manual_curation exon 9148932 9149051 . - . Parent=GSCOCT00033052001 | |
| 4469 chr1 manual_curation exon 9148610 9148701 . - . Parent=GSCOCT00033052001 | |
| 4470 chr1 manual_curation exon 9148398 9148467 . - . Parent=GSCOCT00033052001 | |
| 4471 chr1 manual_curation exon 9148320 9148343 . - . Parent=GSCOCT00033052001 | |
| 4472 chr1 manual_curation CDS 9148932 9149051 . - 0 Parent=GSCOCT00033052001 | |
| 4473 chr1 manual_curation CDS 9148610 9148701 . - 0 Parent=GSCOCT00033052001 | |
| 4474 chr1 manual_curation CDS 9148398 9148467 . - 2 Parent=GSCOCT00033052001 | |
| 4475 chr1 manual_curation CDS 9148320 9148343 . - 0 Parent=GSCOCT00033052001 | |
| 4476 chr1 manual_curation gene 9160787 9166482 . + . ID=GSCOCG00040933001;Name=Cc01_g03750 | |
| 4477 chr1 manual_curation mRNA 9160787 9166482 . + . ID=GSCOCT00040933001;Parent=GSCOCG00040933001;Name=Cc01_g03750 | |
| 4478 chr1 manual_curation polypeptide 9160787 9166482 . + . ID=GSCOCP00040933001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:O65790,SwissProt:P93147,SwissProt:Q9FG65,TAIR:AT5G10600.1,TAIR:AT5G10610.1,TAIR:AT5G36220.1,TrEMBL:F5BPI5,TrEMBL:F6GZP6,TrEMBL:F6GZW3;Derives_from=GSCOCT00040933001;Name=Cc01_g03750;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.89,PRODUCT:Putative Cytochrome P450 81D1,CC_functional_completeness:complete,CC_gene:CYP81D1,CC_gene:CYP81F1,CC_gene:CYP81E1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040933001~ Putative Cytochrome P450 81D1~ CYP81D1~ complete;original_location=complement(join(1580364..1581236%2C1575541..1576164));owner=coffea | |
| 4479 chr1 manual_curation exon 9165859 9166482 . + . Parent=GSCOCT00040933001 | |
| 4480 chr1 manual_curation exon 9160787 9161659 . + . Parent=GSCOCT00040933001 | |
| 4481 chr1 manual_curation CDS 9165859 9166482 . + 0 Parent=GSCOCT00040933001 | |
| 4482 chr1 manual_curation CDS 9160787 9161659 . + 0 Parent=GSCOCT00040933001 | |
| 4483 chr1 manual_curation gene 9189295 9193246 . + . ID=GSCOCG00040931001;Name=Cc01_g03760 | |
| 4484 chr1 manual_curation mRNA 9189295 9193246 . + . ID=GSCOCT00040931001;Parent=GSCOCG00040931001;Name=Cc01_g03760 | |
| 4485 chr1 manual_curation polypeptide 9189392 9193246 . + . ID=GSCOCP00040931001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:O65790,SwissProt:P93147,SwissProt:Q9FG65,TAIR:AT4G37370.1,TAIR:AT5G10610.1,TAIR:AT5G36220.1,TrEMBL:F6GZP6,TrEMBL:F6GZW3,TrEMBL:F6HSX8;Derives_from=GSCOCT00040931001;Name=Cc01_g03760;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.89,PRODUCT:Putative Cytochrome P450 81D1,CC_functional_completeness:complete,CC_gene:CYP81D1,CC_gene:CYP81F1,CC_gene:CYP81E1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040931001~ Putative Cytochrome P450 81D1~ CYP81D1~ complete;original_location=complement(join(1551759..1552631%2C1548777..1549400));owner=coffea | |
| 4486 chr1 manual_curation exon 9192623 9193246 . + . Parent=GSCOCT00040931001 | |
| 4487 chr1 manual_curation exon 9189295 9190264 . + . Parent=GSCOCT00040931001 | |
| 4488 chr1 manual_curation CDS 9192623 9193246 . + 0 Parent=GSCOCT00040931001 | |
| 4489 chr1 manual_curation CDS 9189392 9190264 . + 0 Parent=GSCOCT00040931001 | |
| 4490 chr1 manual_curation gene 9226692 9229598 . + . ID=GSCOCG00040929001;Name=Cc01_g03770 | |
| 4491 chr1 manual_curation mRNA 9226692 9229598 . + . ID=GSCOCT00040929001;Parent=GSCOCG00040929001;Name=Cc01_g03770 | |
| 4492 chr1 manual_curation polypeptide 9226692 9229598 . + . ID=GSCOCP00040929001;Dbxref=InterPro:IPR001563,InterPro:IPR018202,PANTHER:PTHR11802,PFAM:PF00450,PRINTS:PR00724,PROSITE:PS00131,SwissProt:Q67Y83,SwissProt:Q920A5,SwissProt:Q920A6,TAIR:AT2G27920.1,TAIR:AT3G10410.1,TAIR:AT3G45010.1,TrEMBL:A5C816,TrEMBL:I1LRA7,TrEMBL:I1LRA8;Derives_from=GSCOCT00040929001;Name=Cc01_g03770;Ontology_term=CC_evidence_code:ISS,GO:0004185,GO:0006508,CC_EC_number:3.4.16.6,PRODUCT:Serine carboxypeptidase-like 51,CC_functional_completeness:complete,CC_gene:SCPL51,CC_gene:Scpep1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040929001~ Serine carboxypeptidase-like 51~ SCPL51~ complete;original_location=complement(join(1515211..1515331%2C1515008..1515102%2C1514814..1514921%2C1514423..1514672%2C1514290..1514333%2C1514142..1514209%2C1513869..1513974%2C1513612..1513787%2C1513457..1513526%2C1513206..1513256%2C1512718..1512770%2C1512425..1512635));owner=coffea | |
| 4493 chr1 manual_curation exon 9229388 9229598 . + . Parent=GSCOCT00040929001 | |
| 4494 chr1 manual_curation exon 9229253 9229305 . + . Parent=GSCOCT00040929001 | |
| 4495 chr1 manual_curation exon 9228767 9228817 . + . Parent=GSCOCT00040929001 | |
| 4496 chr1 manual_curation exon 9228497 9228566 . + . Parent=GSCOCT00040929001 | |
| 4497 chr1 manual_curation exon 9228236 9228411 . + . Parent=GSCOCT00040929001 | |
| 4498 chr1 manual_curation exon 9228049 9228154 . + . Parent=GSCOCT00040929001 | |
| 4499 chr1 manual_curation exon 9227814 9227881 . + . Parent=GSCOCT00040929001 | |
| 4500 chr1 manual_curation exon 9227690 9227733 . + . Parent=GSCOCT00040929001 | |
| 4501 chr1 manual_curation exon 9227351 9227600 . + . Parent=GSCOCT00040929001 | |
| 4502 chr1 manual_curation exon 9227102 9227209 . + . Parent=GSCOCT00040929001 | |
| 4503 chr1 manual_curation exon 9226921 9227015 . + . Parent=GSCOCT00040929001 | |
| 4504 chr1 manual_curation exon 9226692 9226812 . + . Parent=GSCOCT00040929001 | |
| 4505 chr1 manual_curation CDS 9229388 9229598 . + 2 Parent=GSCOCT00040929001 | |
| 4506 chr1 manual_curation CDS 9229253 9229305 . + 0 Parent=GSCOCT00040929001 | |
| 4507 chr1 manual_curation CDS 9228767 9228817 . + 0 Parent=GSCOCT00040929001 | |
| 4508 chr1 manual_curation CDS 9228497 9228566 . + 2 Parent=GSCOCT00040929001 | |
| 4509 chr1 manual_curation CDS 9228236 9228411 . + 0 Parent=GSCOCT00040929001 | |
| 4510 chr1 manual_curation CDS 9228049 9228154 . + 2 Parent=GSCOCT00040929001 | |
| 4511 chr1 manual_curation CDS 9227814 9227881 . + 0 Parent=GSCOCT00040929001 | |
| 4512 chr1 manual_curation CDS 9227690 9227733 . + 1 Parent=GSCOCT00040929001 | |
| 4513 chr1 manual_curation CDS 9227351 9227600 . + 0 Parent=GSCOCT00040929001 | |
| 4514 chr1 manual_curation CDS 9227102 9227209 . + 0 Parent=GSCOCT00040929001 | |
| 4515 chr1 manual_curation CDS 9226921 9227015 . + 1 Parent=GSCOCT00040929001 | |
| 4516 chr1 manual_curation CDS 9226692 9226812 . + 0 Parent=GSCOCT00040929001 | |
| 4517 chr1 manual_curation gene 9255343 9262421 . + . ID=GSCOCG00040928001;Name=Cc01_g03780 | |
| 4518 chr1 manual_curation mRNA 9255343 9262421 . + . ID=GSCOCT00040928001;Parent=GSCOCG00040928001;Name=Cc01_g03780 | |
| 4519 chr1 manual_curation polypeptide 9255343 9262421 . + . ID=GSCOCP00040928001;Dbxref=InterPro:IPR001563,InterPro:IPR018202,PFAM:PF00450,PROSITE:PS00131,SwissProt:Q67Y83,SwissProt:Q920A5,SwissProt:Q920A6,TAIR:AT2G27920.1,TrEMBL:A5C816,TrEMBL:I1LKX9,TrEMBL:I1LRA8;Derives_from=GSCOCT00040928001;Name=Cc01_g03780;Ontology_term=CC_evidence_code:ISS,GO:0004185,GO:0006508,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterized protein,CC_functional_completeness:modules,CC_gene:SCPL51,CC_gene:Scpep1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040928001~ Uncharacterized protein~ SCPL51~ modules;original_location=complement(join(1486364..1486680%2C1486258..1486285%2C1485730..1485870%2C1485610..1485636%2C1485218..1485467%2C1485082..1485128%2C1484938..1485005%2C1484660..1484765%2C1481497..1481527%2C1480996..1481143%2C1480840..1480909%2C1480591..1480641%2C1480343..1480365%2C1480033..1480059%2C1479602..1479914));owner=coffea | |
| 4520 chr1 manual_curation exon 9262109 9262421 . + . Parent=GSCOCT00040928001 | |
| 4521 chr1 manual_curation exon 9261964 9261990 . + . Parent=GSCOCT00040928001 | |
| 4522 chr1 manual_curation exon 9261658 9261680 . + . Parent=GSCOCT00040928001 | |
| 4523 chr1 manual_curation exon 9261382 9261432 . + . Parent=GSCOCT00040928001 | |
| 4524 chr1 manual_curation exon 9261114 9261183 . + . Parent=GSCOCT00040928001 | |
| 4525 chr1 manual_curation exon 9260880 9261027 . + . Parent=GSCOCT00040928001 | |
| 4526 chr1 manual_curation exon 9260496 9260526 . + . Parent=GSCOCT00040928001 | |
| 4527 chr1 manual_curation exon 9257258 9257363 . + . Parent=GSCOCT00040928001 | |
| 4528 chr1 manual_curation exon 9257018 9257085 . + . Parent=GSCOCT00040928001 | |
| 4529 chr1 manual_curation exon 9256895 9256941 . + . Parent=GSCOCT00040928001 | |
| 4530 chr1 manual_curation exon 9256556 9256805 . + . Parent=GSCOCT00040928001 | |
| 4531 chr1 manual_curation exon 9256387 9256413 . + . Parent=GSCOCT00040928001 | |
| 4532 chr1 manual_curation exon 9256153 9256293 . + . Parent=GSCOCT00040928001 | |
| 4533 chr1 manual_curation exon 9255738 9255765 . + . Parent=GSCOCT00040928001 | |
| 4534 chr1 manual_curation exon 9255343 9255659 . + . Parent=GSCOCT00040928001 | |
| 4535 chr1 manual_curation CDS 9262109 9262421 . + 2 Parent=GSCOCT00040928001 | |
| 4536 chr1 manual_curation CDS 9261964 9261990 . + 2 Parent=GSCOCT00040928001 | |
| 4537 chr1 manual_curation CDS 9261658 9261680 . + 0 Parent=GSCOCT00040928001 | |
| 4538 chr1 manual_curation CDS 9261382 9261432 . + 0 Parent=GSCOCT00040928001 | |
| 4539 chr1 manual_curation CDS 9261114 9261183 . + 2 Parent=GSCOCT00040928001 | |
| 4540 chr1 manual_curation CDS 9260880 9261027 . + 1 Parent=GSCOCT00040928001 | |
| 4541 chr1 manual_curation CDS 9260496 9260526 . + 0 Parent=GSCOCT00040928001 | |
| 4542 chr1 manual_curation CDS 9257258 9257363 . + 2 Parent=GSCOCT00040928001 | |
| 4543 chr1 manual_curation CDS 9257018 9257085 . + 0 Parent=GSCOCT00040928001 | |
| 4544 chr1 manual_curation CDS 9256895 9256941 . + 1 Parent=GSCOCT00040928001 | |
| 4545 chr1 manual_curation CDS 9256556 9256805 . + 0 Parent=GSCOCT00040928001 | |
| 4546 chr1 manual_curation CDS 9256387 9256413 . + 0 Parent=GSCOCT00040928001 | |
| 4547 chr1 manual_curation CDS 9256153 9256293 . + 0 Parent=GSCOCT00040928001 | |
| 4548 chr1 manual_curation CDS 9255738 9255765 . + 2 Parent=GSCOCT00040928001 | |
| 4549 chr1 manual_curation CDS 9255343 9255659 . + 0 Parent=GSCOCT00040928001 | |
| 4550 chr1 manual_curation gene 9309751 9312330 . + . ID=GSCOCG00040926001;Name=Cc01_g03790 | |
| 4551 chr1 manual_curation mRNA 9309751 9312330 . + . ID=GSCOCT00040926001;Parent=GSCOCG00040926001;Name=Cc01_g03790 | |
| 4552 chr1 manual_curation polypeptide 9309751 9312330 . + . ID=GSCOCP00040926001;Dbxref=InterPro:IPR001563,PANTHER:PTHR11802,PFAM:PF00450,SwissProt:Q67Y83,SwissProt:Q920A5,SwissProt:Q920A6,TAIR:AT2G27920.1,TrEMBL:I1LKX9,TrEMBL:I1LRA7,TrEMBL:I1LRA8;Derives_from=GSCOCT00040926001;Name=Cc01_g03790;Ontology_term=CC_evidence_code:ISS,GO:0004185,GO:0006508,CC_EC_number:missing_EC_number,PRODUCT:Putative Serine carboxypeptidase-like 51,CC_functional_completeness:fragment,CC_gene:SCPL51,CC_gene:Scpep1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040926001~ Putative Serine carboxypeptidase-like 51~ SCPL51~ fragment;original_location=complement(join(1432199..1432272%2C1431532..1431643%2C1431337..1431392%2C1431108..1431128%2C1431009..1431043%2C1430863..1430929%2C1430652..1430757%2C1430410..1430548%2C1430175..1430270%2C1429693..1429742));owner=coffea | |
| 4553 chr1 manual_curation exon 9312281 9312330 . + . Parent=GSCOCT00040926001 | |
| 4554 chr1 manual_curation exon 9311753 9311848 . + . Parent=GSCOCT00040926001 | |
| 4555 chr1 manual_curation exon 9311475 9311613 . + . Parent=GSCOCT00040926001 | |
| 4556 chr1 manual_curation exon 9311266 9311371 . + . Parent=GSCOCT00040926001 | |
| 4557 chr1 manual_curation exon 9311094 9311160 . + . Parent=GSCOCT00040926001 | |
| 4558 chr1 manual_curation exon 9310980 9311014 . + . Parent=GSCOCT00040926001 | |
| 4559 chr1 manual_curation exon 9310895 9310915 . + . Parent=GSCOCT00040926001 | |
| 4560 chr1 manual_curation exon 9310631 9310686 . + . Parent=GSCOCT00040926001 | |
| 4561 chr1 manual_curation exon 9310380 9310491 . + . Parent=GSCOCT00040926001 | |
| 4562 chr1 manual_curation exon 9309751 9309824 . + . Parent=GSCOCT00040926001 | |
| 4563 chr1 manual_curation CDS 9312281 9312330 . + 1 Parent=GSCOCT00040926001 | |
| 4564 chr1 manual_curation CDS 9311753 9311848 . + 1 Parent=GSCOCT00040926001 | |
| 4565 chr1 manual_curation CDS 9311475 9311613 . + 0 Parent=GSCOCT00040926001 | |
| 4566 chr1 manual_curation CDS 9311266 9311371 . + 2 Parent=GSCOCT00040926001 | |
| 4567 chr1 manual_curation CDS 9311094 9311160 . + 1 Parent=GSCOCT00040926001 | |
| 4568 chr1 manual_curation CDS 9310980 9311014 . + 2 Parent=GSCOCT00040926001 | |
| 4569 chr1 manual_curation CDS 9310895 9310915 . + 2 Parent=GSCOCT00040926001 | |
| 4570 chr1 manual_curation CDS 9310631 9310686 . + 0 Parent=GSCOCT00040926001 | |
| 4571 chr1 manual_curation CDS 9310380 9310491 . + 2 Parent=GSCOCT00040926001 | |
| 4572 chr1 manual_curation CDS 9309751 9309824 . + 0 Parent=GSCOCT00040926001 | |
| 4573 chr1 manual_curation gene 9460439 9463481 . - . ID=GSCOCG00040919001;Name=Cc01_g03800 | |
| 4574 chr1 manual_curation mRNA 9460439 9463481 . - . ID=GSCOCT00040919001;Parent=GSCOCG00040919001;Name=Cc01_g03800 | |
| 4575 chr1 manual_curation polypeptide 9460709 9463147 . - . ID=GSCOCP00040919001;Dbxref=TAIR:AT5G19630.1,TrEMBL:C6TKS4,TrEMBL:D7LZA1,TrEMBL:I1NJC6;Derives_from=GSCOCT00040919001;Name=Cc01_g03800;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:alpha/beta-Hydrolases superfamily protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040919001~ alpha/beta-Hydrolases superfamily protein~ unknown_gene~ fragment;original_location=join(1278876..1278993%2C1281058..1281314);owner=coffea | |
| 4576 chr1 manual_curation exon 9463030 9463481 . - . Parent=GSCOCT00040919001 | |
| 4577 chr1 manual_curation exon 9460439 9460965 . - . Parent=GSCOCT00040919001 | |
| 4578 chr1 manual_curation CDS 9463030 9463147 . - 0 Parent=GSCOCT00040919001 | |
| 4579 chr1 manual_curation CDS 9460709 9460965 . - 1 Parent=GSCOCT00040919001 | |
| 4580 chr1 manual_curation gene 9506517 9514044 . + . ID=GSCOCG00040918001;Name=Cc01_g03810 | |
| 4581 chr1 manual_curation mRNA 9506517 9514044 . + . ID=GSCOCT00040918001;Parent=GSCOCG00040918001;Name=Cc01_g03810 | |
| 4582 chr1 manual_curation polypeptide 9506723 9514044 . + . ID=GSCOCP00040918001;Dbxref=InterPro:IPR003846,PFAM:PF02696,SwissProt:A1K5T6,SwissProt:Q1H0D2,SwissProt:Q5NYD9,TAIR:AT5G13030.1,TrEMBL:B9GLN2,TrEMBL:B9RI64,TrEMBL:F6GUD9;Derives_from=GSCOCT00040918001;Name=Cc01_g03810;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:UPF0061 protein azo1574,CC_functional_completeness:complete,CC_gene:azo1574,CC_gene:AZOSEA38000,CC_gene:Mfla_1788;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040918001~ UPF0061 protein azo1574~ azo1574~ complete;original_location=complement(join(1235088..1235300%2C1234085..1234194%2C1232908..1232964%2C1232527..1232826%2C1231855..1232102%2C1230813..1231119%2C1230463..1230736%2C1227979..1228233));owner=coffea | |
| 4583 chr1 manual_curation exon 9513790 9514044 . + . Parent=GSCOCT00040918001 | |
| 4584 chr1 manual_curation exon 9511287 9511560 . + . Parent=GSCOCT00040918001 | |
| 4585 chr1 manual_curation exon 9510904 9511210 . + . Parent=GSCOCT00040918001 | |
| 4586 chr1 manual_curation exon 9509921 9510168 . + . Parent=GSCOCT00040918001 | |
| 4587 chr1 manual_curation exon 9509197 9509496 . + . Parent=GSCOCT00040918001 | |
| 4588 chr1 manual_curation exon 9509059 9509115 . + . Parent=GSCOCT00040918001 | |
| 4589 chr1 manual_curation exon 9507829 9507938 . + . Parent=GSCOCT00040918001 | |
| 4590 chr1 manual_curation exon 9506517 9506935 . + . Parent=GSCOCT00040918001 | |
| 4591 chr1 manual_curation CDS 9513790 9514044 . + 0 Parent=GSCOCT00040918001 | |
| 4592 chr1 manual_curation CDS 9511287 9511560 . + 2 Parent=GSCOCT00040918001 | |
| 4593 chr1 manual_curation CDS 9510904 9511210 . + 1 Parent=GSCOCT00040918001 | |
| 4594 chr1 manual_curation CDS 9509921 9510168 . + 2 Parent=GSCOCT00040918001 | |
| 4595 chr1 manual_curation CDS 9509197 9509496 . + 2 Parent=GSCOCT00040918001 | |
| 4596 chr1 manual_curation CDS 9509059 9509115 . + 2 Parent=GSCOCT00040918001 | |
| 4597 chr1 manual_curation CDS 9507829 9507938 . + 0 Parent=GSCOCT00040918001 | |
| 4598 chr1 manual_curation CDS 9506723 9506935 . + 0 Parent=GSCOCT00040918001 | |
| 4599 chr1 manual_curation gene 9518631 9520378 . - . ID=GSCOCG00040916001;Name=Cc01_g03820 | |
| 4600 chr1 manual_curation mRNA 9518631 9520378 . - . ID=GSCOCT00040916001;Parent=GSCOCG00040916001;Name=Cc01_g03820 | |
| 4601 chr1 manual_curation polypeptide 9518754 9519245 . - . ID=GSCOCP00040916001;Dbxref=InterPro:IPR004143,InterPro:IPR020605,PFAM:PF03099,PROSITE:PS01313,SwissProt:C1F3S1,SwissProt:Q29R99,SwissProt:Q9SXP7,TAIR:AT1G04640.1,TAIR:AT1G47578.1,TAIR:AT4G31050.1,TrEMBL:B9GLN3,TrEMBL:D7KE60,TrEMBL:F6GUD8;Derives_from=GSCOCT00040916001;Name=Cc01_g03820;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005737,GO:0006464,GO:0009107,GO:0016415,CC_EC_number:missing_EC_number,PRODUCT:Octanoyltransferase,CC_functional_completeness:fragment,CC_gene:LIP2,CC_gene:lipt2,CC_gene:lipB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040916001~ Octanoyltransferase~ LIP2~ fragment;original_location=1222778..1223269;owner=coffea | |
| 4602 chr1 manual_curation exon 9518631 9520378 . - . Parent=GSCOCT00040916001 | |
| 4603 chr1 manual_curation CDS 9518754 9519245 . - 0 Parent=GSCOCT00040916001 | |
| 4604 chr1 manual_curation gene 9654569 9656992 . + . ID=GSCOCG00040909001;Name=Cc01_g03830 | |
| 4605 chr1 manual_curation mRNA 9654569 9656992 . + . ID=GSCOCT00040909001;Parent=GSCOCG00040909001;Name=Cc01_g03830 | |
| 4606 chr1 manual_curation polypeptide 9654569 9656992 . + . ID=GSCOCP00040909001;Dbxref=InterPro:IPR000719,InterPro:IPR001480,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF01453,PROFILE:PS50011,PROFILE:PS50927,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF51110,SUPERFAMILY:SSF56112,SwissProt:Q39202,SwissProt:Q39203,SwissProt:Q8RWZ5,TAIR:AT1G34300.1,TAIR:AT4G32300.1,TAIR:AT5G60900.1,TrEMBL:B9GYW0,TrEMBL:B9N6G8,TrEMBL:B9P4Z0;Derives_from=GSCOCT00040909001;Name=Cc01_g03830;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0005529,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative G-type lectin S-receptor-like serine/threonine-protein kinase RLK1,CC_functional_completeness:complete,CC_gene:RLK1,CC_gene:SD22,CC_gene:SD25;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040909001~ Putative G-type lectin S-receptor-like serine/threonine-protein kinase RLK1~ RLK1~ complete;original_location=complement(join(1086783..1087454%2C1086258..1086689%2C1085031..1085987));owner=coffea | |
| 4607 chr1 manual_curation exon 9656036 9656992 . + . Parent=GSCOCT00040909001 | |
| 4608 chr1 manual_curation exon 9655334 9655765 . + . Parent=GSCOCT00040909001 | |
| 4609 chr1 manual_curation exon 9654569 9655240 . + . Parent=GSCOCT00040909001 | |
| 4610 chr1 manual_curation CDS 9656036 9656992 . + 0 Parent=GSCOCT00040909001 | |
| 4611 chr1 manual_curation CDS 9655334 9655765 . + 0 Parent=GSCOCT00040909001 | |
| 4612 chr1 manual_curation CDS 9654569 9655240 . + 0 Parent=GSCOCT00040909001 | |
| 4613 chr1 manual_curation gene 9667251 9671522 . - . ID=GSCOCG00040908001;Name=Cc01_g03840 | |
| 4614 chr1 manual_curation mRNA 9667251 9671522 . - . ID=GSCOCT00040908001;Parent=GSCOCG00040908001;Name=Cc01_g03840 | |
| 4615 chr1 manual_curation polypeptide 9667616 9670934 . - . ID=GSCOCP00040908001;Derives_from=GSCOCT00040908001;Name=Cc01_g03840;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040908001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(1071089..1071152%2C1074277..1074407);owner=coffea | |
| 4616 chr1 manual_curation exon 9670871 9671522 . - . Parent=GSCOCT00040908001 | |
| 4617 chr1 manual_curation exon 9667251 9667746 . - . Parent=GSCOCT00040908001 | |
| 4618 chr1 manual_curation CDS 9670871 9670934 . - 0 Parent=GSCOCT00040908001 | |
| 4619 chr1 manual_curation CDS 9667616 9667746 . - 1 Parent=GSCOCT00040908001 | |
| 4620 chr1 manual_curation gene 9681307 9682015 . - . ID=GSCOCG00040907001;Name=Cc01_g03850 | |
| 4621 chr1 manual_curation mRNA 9681307 9682015 . - . ID=GSCOCT00040907001;Parent=GSCOCG00040907001;Name=Cc01_g03850 | |
| 4622 chr1 manual_curation polypeptide 9681307 9682015 . - . ID=GSCOCP00040907001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,PANTHER:PTHR19383,PFAM:PF00067,SUPERFAMILY:SSF48264,SwissProt:O65790,SwissProt:P93147,SwissProt:Q9FG65,TAIR:AT4G37320.1,TAIR:AT4G37330.1,TAIR:AT5G36220.1,TrEMBL:B9R747,TrEMBL:D7MI05,TrEMBL:Q6WNQ8;Derives_from=GSCOCT00040907001;Name=Cc01_g03850;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,CC_EC_number:1.14.13.89,PRODUCT:Putative Cytochrome P450,CC_functional_completeness:complete,CC_gene:CYP81D1,CC_gene:CYP81E1,CC_gene:CYP81F1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040907001~ Putative Cytochrome P450~ CYP81D1~ complete;original_location=join(1060008..1060046%2C1060132..1060276%2C1060652..1060716);owner=coffea | |
| 4623 chr1 manual_curation exon 9681977 9682015 . - . Parent=GSCOCT00040907001 | |
| 4624 chr1 manual_curation exon 9681747 9681891 . - . Parent=GSCOCT00040907001 | |
| 4625 chr1 manual_curation exon 9681307 9681371 . - . Parent=GSCOCT00040907001 | |
| 4626 chr1 manual_curation CDS 9681977 9682015 . - 0 Parent=GSCOCT00040907001 | |
| 4627 chr1 manual_curation CDS 9681747 9681891 . - 0 Parent=GSCOCT00040907001 | |
| 4628 chr1 manual_curation CDS 9681307 9681371 . - 1 Parent=GSCOCT00040907001 | |
| 4629 chr1 manual_curation gene 9684340 9686108 . + . ID=GSCOCG00040906001;Name=Cc01_g03860 | |
| 4630 chr1 manual_curation mRNA 9684340 9686108 . + . ID=GSCOCT00040906001;Parent=GSCOCG00040906001;Name=Cc01_g03860 | |
| 4631 chr1 manual_curation polypeptide 9684340 9686108 . + . ID=GSCOCP00040906001;Dbxref=InterPro:IPR005123,PFAM:PF03171,SwissProt:Q39110,SwissProt:Q96330,SwissProt:Q9FFQ4,TAIR:AT1G52790.1,TAIR:AT1G52800.1,TAIR:AT1G52820.1,TrEMBL:A5AJI0,TrEMBL:B9GL06,TrEMBL:D7U0Q7;Derives_from=GSCOCT00040906001;Name=Cc01_g03860;Ontology_term=CC_evidence_code:ISS,GO:0016491,CC_EC_number:1.14.11.15,PRODUCT:Putative Flavonol synthase/flavanone 3-hydroxylase,CC_functional_completeness:complete,CC_gene:FLS1,CC_gene:FLS5,CC_gene:20ox1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040906001~ Putative Flavonol synthase/flavanone 3-hydroxylase~ FLS1~ complete;original_location=complement(join(1057307..1057683%2C1056856..1057180%2C1055915..1056166));owner=coffea | |
| 4632 chr1 manual_curation exon 9685857 9686108 . + . Parent=GSCOCT00040906001 | |
| 4633 chr1 manual_curation exon 9684843 9685167 . + . Parent=GSCOCT00040906001 | |
| 4634 chr1 manual_curation exon 9684340 9684716 . + . Parent=GSCOCT00040906001 | |
| 4635 chr1 manual_curation CDS 9685857 9686108 . + 0 Parent=GSCOCT00040906001 | |
| 4636 chr1 manual_curation CDS 9684843 9685167 . + 2 Parent=GSCOCT00040906001 | |
| 4637 chr1 manual_curation CDS 9684340 9684716 . + 0 Parent=GSCOCT00040906001 | |
| 4638 chr1 manual_curation gene 9693313 9693999 . - . ID=GSCOCG00040903001;Name=Cc01_g03870 | |
| 4639 chr1 manual_curation mRNA 9693313 9693999 . - . ID=GSCOCT00040903001;Parent=GSCOCG00040903001;Name=Cc01_g03870 | |
| 4640 chr1 manual_curation polypeptide 9693313 9693999 . - . ID=GSCOCP00040903001;Derives_from=GSCOCT00040903001;Name=Cc01_g03870;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040903001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1048024..1048710;owner=coffea | |
| 4641 chr1 manual_curation exon 9693313 9693999 . - . Parent=GSCOCT00040903001 | |
| 4642 chr1 manual_curation CDS 9693313 9693999 . - 0 Parent=GSCOCT00040903001 | |
| 4643 chr1 manual_curation gene 9700983 9705676 . + . ID=GSCOCG00040901001;Name=Cc01_g03880 | |
| 4644 chr1 manual_curation mRNA 9700983 9705676 . + . ID=GSCOCT00040901001;Parent=GSCOCG00040901001;Name=Cc01_g03880 | |
| 4645 chr1 manual_curation polypeptide 9700983 9705676 . + . ID=GSCOCP00040901001;Dbxref=InterPro:IPR008758,PANTHER:PTHR11010,PFAM:PF05577,SwissProt:P42785,SwissProt:Q5RBU7,SwissProt:Q7TMR0,TAIR:AT2G24280.1,TAIR:AT5G22860.1,TAIR:AT5G65760.1,TrEMBL:A5C9W6,TrEMBL:F6GW68,TrEMBL:F6GW70;Derives_from=GSCOCT00040901001;Name=Cc01_g03880;Ontology_term=CC_evidence_code:ISS,GO:0006508,GO:0008236,CC_EC_number:3.4.16.2,PRODUCT:Putative Lysosomal Pro-X carboxypeptidase,CC_functional_completeness:complete,CC_gene:PRCP,CC_gene:Prcp;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040901001~ Putative Lysosomal Pro-X carboxypeptidase~ PRCP~ complete;original_location=complement(join(1040799..1041040%2C1040498..1040618%2C1040205..1040391%2C1039931..1040067%2C1039723..1039832%2C1038026..1038272%2C1037655..1037683%2C1037051..1037183%2C1036839..1036918%2C1036595..1036644%2C1036347..1036483));owner=coffea | |
| 4646 chr1 manual_curation exon 9705540 9705676 . + . Parent=GSCOCT00040901001 | |
| 4647 chr1 manual_curation exon 9705379 9705428 . + . Parent=GSCOCT00040901001 | |
| 4648 chr1 manual_curation exon 9705105 9705184 . + . Parent=GSCOCT00040901001 | |
| 4649 chr1 manual_curation exon 9704840 9704972 . + . Parent=GSCOCT00040901001 | |
| 4650 chr1 manual_curation exon 9704340 9704368 . + . Parent=GSCOCT00040901001 | |
| 4651 chr1 manual_curation exon 9703751 9703997 . + . Parent=GSCOCT00040901001 | |
| 4652 chr1 manual_curation exon 9702191 9702300 . + . Parent=GSCOCT00040901001 | |
| 4653 chr1 manual_curation exon 9701956 9702092 . + . Parent=GSCOCT00040901001 | |
| 4654 chr1 manual_curation exon 9701632 9701818 . + . Parent=GSCOCT00040901001 | |
| 4655 chr1 manual_curation exon 9701405 9701525 . + . Parent=GSCOCT00040901001 | |
| 4656 chr1 manual_curation exon 9700983 9701224 . + . Parent=GSCOCT00040901001 | |
| 4657 chr1 manual_curation CDS 9705540 9705676 . + 1 Parent=GSCOCT00040901001 | |
| 4658 chr1 manual_curation CDS 9705379 9705428 . + 2 Parent=GSCOCT00040901001 | |
| 4659 chr1 manual_curation CDS 9705105 9705184 . + 0 Parent=GSCOCT00040901001 | |
| 4660 chr1 manual_curation CDS 9704840 9704972 . + 2 Parent=GSCOCT00040901001 | |
| 4661 chr1 manual_curation CDS 9704340 9704368 . + 0 Parent=GSCOCT00040901001 | |
| 4662 chr1 manual_curation CDS 9703751 9703997 . + 2 Parent=GSCOCT00040901001 | |
| 4663 chr1 manual_curation CDS 9702191 9702300 . + 0 Parent=GSCOCT00040901001 | |
| 4664 chr1 manual_curation CDS 9701956 9702092 . + 1 Parent=GSCOCT00040901001 | |
| 4665 chr1 manual_curation CDS 9701632 9701818 . + 0 Parent=GSCOCT00040901001 | |
| 4666 chr1 manual_curation CDS 9701405 9701525 . + 2 Parent=GSCOCT00040901001 | |
| 4667 chr1 manual_curation CDS 9700983 9701224 . + 0 Parent=GSCOCT00040901001 | |
| 4668 chr1 manual_curation gene 9722194 9722656 . + . ID=GSCOCG00040898001;Name=Cc01_g03890 | |
| 4669 chr1 manual_curation mRNA 9722194 9722656 . + . ID=GSCOCT00040898001;Parent=GSCOCG00040898001;Name=Cc01_g03890 | |
| 4670 chr1 manual_curation polypeptide 9722194 9722483 . + . ID=GSCOCP00040898001;Derives_from=GSCOCT00040898001;Name=Cc01_g03890;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040898001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1019764..1019829%2C1019540..1019656));owner=coffea | |
| 4671 chr1 manual_curation exon 9722367 9722656 . + . Parent=GSCOCT00040898001 | |
| 4672 chr1 manual_curation exon 9722194 9722259 . + . Parent=GSCOCT00040898001 | |
| 4673 chr1 manual_curation CDS 9722367 9722483 . + 0 Parent=GSCOCT00040898001 | |
| 4674 chr1 manual_curation CDS 9722194 9722259 . + 0 Parent=GSCOCT00040898001 | |
| 4675 chr1 manual_curation gene 9729375 9730648 . - . ID=GSCOCG00040894001;Name=Cc01_g03900 | |
| 4676 chr1 manual_curation mRNA 9729375 9730648 . - . ID=GSCOCT00040894001;Parent=GSCOCG00040894001;Name=Cc01_g03900 | |
| 4677 chr1 manual_curation polypeptide 9730409 9730648 . - . ID=GSCOCP00040894001;Derives_from=GSCOCT00040894001;Name=Cc01_g03900;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040894001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1011375..1011614;owner=coffea | |
| 4678 chr1 manual_curation exon 9729375 9730648 . - . Parent=GSCOCT00040894001 | |
| 4679 chr1 manual_curation CDS 9730409 9730648 . - 0 Parent=GSCOCT00040894001 | |
| 4680 chr1 manual_curation gene 9738009 9740408 . + . ID=GSCOCG00040891001;Name=Cc01_g03910 | |
| 4681 chr1 manual_curation mRNA 9738009 9740408 . + . ID=GSCOCT00040891001;Parent=GSCOCG00040891001;Name=Cc01_g03910 | |
| 4682 chr1 manual_curation polypeptide 9738009 9740408 . + . ID=GSCOCP00040891001;Dbxref=InterPro:IPR000858,InterPro:IPR001480,PFAM:PF00954,PFAM:PF01453,PROFILE:PS50927,SMART:SM00108,SUPERFAMILY:SSF51110,SwissProt:P17801,SwissProt:Q39202,SwissProt:Q9FLV4,TAIR:AT1G34300.1,TAIR:AT1G65790.1,TAIR:AT5G60900.1,TrEMBL:B9NFQ3,TrEMBL:B9NGV9,TrEMBL:Q0ZCC5;Derives_from=GSCOCT00040891001;Name=Cc01_g03910;Ontology_term=CC_evidence_code:ISS,GO:0005529,GO:0048544,CC_EC_number:missing_EC_number,PRODUCT:Putative G-type lectin S-receptor-like serine/threonine-protein kinase RLK1,CC_functional_completeness:fragment,CC_gene:RLK1,CC_gene:PK1,CC_gene:At5g24080;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040891001~ Putative G-type lectin S-receptor-like serine/threonine-protein kinase RLK1~ RLK1~ fragment;original_location=complement(join(1002455..1004014%2C1001615..1001782));owner=coffea | |
| 4683 chr1 manual_curation exon 9740241 9740408 . + . Parent=GSCOCT00040891001 | |
| 4684 chr1 manual_curation exon 9738009 9739568 . + . Parent=GSCOCT00040891001 | |
| 4685 chr1 manual_curation CDS 9740241 9740408 . + 0 Parent=GSCOCT00040891001 | |
| 4686 chr1 manual_curation CDS 9738009 9739568 . + 0 Parent=GSCOCT00040891001 | |
| 4687 chr1 manual_curation gene 9797030 9802897 . + . ID=GSCOCG00040890001;Name=Cc01_g03920 | |
| 4688 chr1 manual_curation mRNA 9797030 9802897 . + . ID=GSCOCT00040890001;Parent=GSCOCG00040890001;Name=Cc01_g03920 | |
| 4689 chr1 manual_curation polypeptide 9797030 9802897 . + . ID=GSCOCP00040890001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR001360,InterPro:IPR013781,InterPro:IPR017853,InterPro:IPR018120,PANTHER:PTHR10353,PFAM:PF00232,PRINTS:PR00131,PROSITE:PS00653,SUPERFAMILY:SSF51445,SwissProt:Q5Z9Z0,SwissProt:Q7XKV2,SwissProt:Q7XKV4,TAIR:AT2G44450.1,TAIR:AT2G44480.1,TAIR:AT5G42260.1,TrEMBL:B1B611,TrEMBL:B2ZUU2,TrEMBL:I1LJS1;Derives_from=GSCOCT00040890001;Name=Cc01_g03920;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0043169,CC_EC_number:3.2.1.21,PRODUCT:Beta-glucosidase 24,CC_functional_completeness:complete,CC_gene:BGLU24,CC_gene:BGLU12,CC_gene:BGLU13;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040890001~ Beta-glucosidase 24~ BGLU24~ complete;original_location=complement(join(944892..944993%2C944704..944776%2C943943..943995%2C943729..943804%2C943508..943591%2C943307..943394%2C942770..942900%2C942579..942697%2C942055..942170%2C941372..941574%2C941182..941213%2C940868..940970%2C939933..940041%2C939126..939312));owner=coffea | |
| 4690 chr1 manual_curation exon 9802711 9802897 . + . Parent=GSCOCT00040890001 | |
| 4691 chr1 manual_curation exon 9801982 9802090 . + . Parent=GSCOCT00040890001 | |
| 4692 chr1 manual_curation exon 9801053 9801155 . + . Parent=GSCOCT00040890001 | |
| 4693 chr1 manual_curation exon 9800810 9800841 . + . Parent=GSCOCT00040890001 | |
| 4694 chr1 manual_curation exon 9800449 9800651 . + . Parent=GSCOCT00040890001 | |
| 4695 chr1 manual_curation exon 9799853 9799968 . + . Parent=GSCOCT00040890001 | |
| 4696 chr1 manual_curation exon 9799326 9799444 . + . Parent=GSCOCT00040890001 | |
| 4697 chr1 manual_curation exon 9799123 9799253 . + . Parent=GSCOCT00040890001 | |
| 4698 chr1 manual_curation exon 9798629 9798716 . + . Parent=GSCOCT00040890001 | |
| 4699 chr1 manual_curation exon 9798432 9798515 . + . Parent=GSCOCT00040890001 | |
| 4700 chr1 manual_curation exon 9798219 9798294 . + . Parent=GSCOCT00040890001 | |
| 4701 chr1 manual_curation exon 9798028 9798080 . + . Parent=GSCOCT00040890001 | |
| 4702 chr1 manual_curation exon 9797247 9797319 . + . Parent=GSCOCT00040890001 | |
| 4703 chr1 manual_curation exon 9797030 9797131 . + . Parent=GSCOCT00040890001 | |
| 4704 chr1 manual_curation CDS 9802711 9802897 . + 2 Parent=GSCOCT00040890001 | |
| 4705 chr1 manual_curation CDS 9801982 9802090 . + 1 Parent=GSCOCT00040890001 | |
| 4706 chr1 manual_curation CDS 9801053 9801155 . + 0 Parent=GSCOCT00040890001 | |
| 4707 chr1 manual_curation CDS 9800810 9800841 . + 1 Parent=GSCOCT00040890001 | |
| 4708 chr1 manual_curation CDS 9800449 9800651 . + 2 Parent=GSCOCT00040890001 | |
| 4709 chr1 manual_curation CDS 9799853 9799968 . + 0 Parent=GSCOCT00040890001 | |
| 4710 chr1 manual_curation CDS 9799326 9799444 . + 1 Parent=GSCOCT00040890001 | |
| 4711 chr1 manual_curation CDS 9799123 9799253 . + 2 Parent=GSCOCT00040890001 | |
| 4712 chr1 manual_curation CDS 9798629 9798716 . + 1 Parent=GSCOCT00040890001 | |
| 4713 chr1 manual_curation CDS 9798432 9798515 . + 1 Parent=GSCOCT00040890001 | |
| 4714 chr1 manual_curation CDS 9798219 9798294 . + 0 Parent=GSCOCT00040890001 | |
| 4715 chr1 manual_curation CDS 9798028 9798080 . + 1 Parent=GSCOCT00040890001 | |
| 4716 chr1 manual_curation CDS 9797247 9797319 . + 0 Parent=GSCOCT00040890001 | |
| 4717 chr1 manual_curation CDS 9797030 9797131 . + 0 Parent=GSCOCT00040890001 | |
| 4718 chr1 manual_curation gene 9815508 9816935 . + . ID=GSCOCG00040889001;Name=Cc01_g03930 | |
| 4719 chr1 manual_curation mRNA 9815508 9816935 . + . ID=GSCOCT00040889001;Parent=GSCOCG00040889001;Name=Cc01_g03930 | |
| 4720 chr1 manual_curation polypeptide 9815508 9816935 . + . ID=GSCOCP00040889001;Dbxref=InterPro:IPR001480,PFAM:PF01453,PROFILE:PS50927,SMART:SM00108,SUPERFAMILY:SSF51110,SwissProt:P17801,SwissProt:Q39202,SwissProt:Q9FLV4,TAIR:AT1G34300.1,TAIR:AT4G21390.1,TAIR:AT5G60900.1,TrEMBL:B9NFQ3,TrEMBL:B9NGV9,TrEMBL:Q0ZCC5;Derives_from=GSCOCT00040889001;Name=Cc01_g03930;Ontology_term=CC_evidence_code:ISS,GO:0005529,CC_EC_number:missing_EC_number,PRODUCT:Putative G-type lectin S-receptor-like serine/threonine-protein kinase RLK1,CC_functional_completeness:fragment,CC_gene:RLK1,CC_gene:At5g24080,CC_gene:PK1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040889001~ Putative G-type lectin S-receptor-like serine/threonine-protein kinase RLK1~ RLK1~ fragment;original_location=complement(925088..926515);owner=coffea | |
| 4721 chr1 manual_curation exon 9815508 9816935 . + . Parent=GSCOCT00040889001 | |
| 4722 chr1 manual_curation CDS 9815508 9816935 . + 0 Parent=GSCOCT00040889001 | |
| 4723 chr1 manual_curation gene 9868826 9869902 . + . ID=GSCOCG00040884001;Name=Cc01_g03940 | |
| 4724 chr1 manual_curation mRNA 9868826 9869902 . + . ID=GSCOCT00040884001;Parent=GSCOCG00040884001;Name=Cc01_g03940 | |
| 4725 chr1 manual_curation polypeptide 9868826 9869902 . + . ID=GSCOCP00040884001;Dbxref=InterPro:IPR000858,InterPro:IPR001480,PFAM:PF00954,PFAM:PF01453,SUPERFAMILY:SSF51110,SwissProt:Q39202,SwissProt:Q9FLV4,TAIR:AT4G03230.1,TAIR:AT4G21380.1,TAIR:AT5G60900.1,TrEMBL:B9NFQ3,TrEMBL:B9NGV9,TrEMBL:Q0ZCC5;Derives_from=GSCOCT00040884001;Name=Cc01_g03940;Ontology_term=CC_evidence_code:ISS,GO:0005529,GO:0048544,CC_EC_number:missing_EC_number,PRODUCT:Putative G-type lectin S-receptor-like serine/threonine-protein kinase RLK1,CC_functional_completeness:fragment,CC_gene:RLK1,CC_gene:At5g24080;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040884001~ Putative G-type lectin S-receptor-like serine/threonine-protein kinase RLK1~ RLK1~ fragment;original_location=complement(872121..873197);owner=coffea | |
| 4726 chr1 manual_curation exon 9868826 9869902 . + . Parent=GSCOCT00040884001 | |
| 4727 chr1 manual_curation CDS 9868826 9869902 . + 0 Parent=GSCOCT00040884001 | |
| 4728 chr1 manual_curation gene 9897086 9899541 . + . ID=GSCOCG00040882001;Name=Cc01_g03950 | |
| 4729 chr1 manual_curation mRNA 9897086 9899541 . + . ID=GSCOCT00040882001;Parent=GSCOCG00040882001;Name=Cc01_g03950 | |
| 4730 chr1 manual_curation polypeptide 9897086 9899541 . + . ID=GSCOCP00040882001;Dbxref=InterPro:IPR000719,InterPro:IPR001480,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF01453,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF51110,SUPERFAMILY:SSF56112,SwissProt:Q39202,SwissProt:Q9FLV4,SwissProt:Q9XID3,TAIR:AT1G34300.1,TAIR:AT2G19130.1,TAIR:AT5G60900.1,TrEMBL:B9NFQ3,TrEMBL:B9NGV9,TrEMBL:Q0ZCC5;Derives_from=GSCOCT00040882001;Name=Cc01_g03950;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0005529,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative G-type lectin S-receptor-like serine/threonine-protein kinase RLK1,CC_functional_completeness:complete,CC_gene:RLK1,CC_gene:At5g24080,CC_gene:At1g34300;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040882001~ Putative G-type lectin S-receptor-like serine/threonine-protein kinase RLK1~ RLK1~ complete;original_location=complement(join(844705..844937%2C843675..844597%2C842763..843606%2C842482..842680));owner=coffea | |
| 4731 chr1 manual_curation exon 9899343 9899541 . + . Parent=GSCOCT00040882001 | |
| 4732 chr1 manual_curation exon 9898417 9899260 . + . Parent=GSCOCT00040882001 | |
| 4733 chr1 manual_curation exon 9897426 9898348 . + . Parent=GSCOCT00040882001 | |
| 4734 chr1 manual_curation exon 9897086 9897318 . + . Parent=GSCOCT00040882001 | |
| 4735 chr1 manual_curation CDS 9899343 9899541 . + 2 Parent=GSCOCT00040882001 | |
| 4736 chr1 manual_curation CDS 9898417 9899260 . + 1 Parent=GSCOCT00040882001 | |
| 4737 chr1 manual_curation CDS 9897426 9898348 . + 2 Parent=GSCOCT00040882001 | |
| 4738 chr1 manual_curation CDS 9897086 9897318 . + 0 Parent=GSCOCT00040882001 | |
| 4739 chr1 manual_curation gene 9993840 9995186 . + . ID=GSCOCG00040880001;Name=Cc01_g03960 | |
| 4740 chr1 manual_curation mRNA 9993840 9995186 . + . ID=GSCOCT00040880001;Parent=GSCOCG00040880001;Name=Cc01_g03960 | |
| 4741 chr1 manual_curation polypeptide 9993840 9995186 . + . ID=GSCOCP00040880001;Dbxref=InterPro:IPR001480,PFAM:PF01453,PROFILE:PS50927,SMART:SM00108,SUPERFAMILY:SSF51110,SwissProt:P17801,SwissProt:Q39202,SwissProt:Q9FLV4,TAIR:AT1G65790.1,TAIR:AT4G21390.1,TAIR:AT5G60900.1,TrEMBL:B9GMB0,TrEMBL:B9NFQ3,TrEMBL:Q0ZCC5;Derives_from=GSCOCT00040880001;Name=Cc01_g03960;Ontology_term=CC_evidence_code:ISS,GO:0005529,CC_EC_number:missing_EC_number,PRODUCT:Putative G-type lectin S-receptor-like serine/threonine-protein kinase RLK1,CC_functional_completeness:fragment,CC_gene:RLK1,CC_gene:At5g24080,CC_gene:PK1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040880001~ Putative G-type lectin S-receptor-like serine/threonine-protein kinase RLK1~ RLK1~ fragment;original_location=complement(746837..748183);owner=coffea | |
| 4742 chr1 manual_curation exon 9993840 9995186 . + . Parent=GSCOCT00040880001 | |
| 4743 chr1 manual_curation CDS 9993840 9995186 . + 0 Parent=GSCOCT00040880001 | |
| 4744 chr1 manual_curation gene 10191146 10193075 . + . ID=GSCOCG00040873001;Name=Cc01_g03970 | |
| 4745 chr1 manual_curation mRNA 10191146 10193075 . + . ID=GSCOCT00040873001;Parent=GSCOCG00040873001;Name=Cc01_g03970 | |
| 4746 chr1 manual_curation polypeptide 10191342 10193075 . + . ID=GSCOCP00040873001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR008030,InterPro:IPR016040,PFAM:PF05368,SwissProt:P52577,SwissProt:P52578,SwissProt:P52580,TAIR:AT1G75280.1,TAIR:AT1G75290.1,TAIR:AT4G39230.1,TrEMBL:B2WSN1,TrEMBL:B6VRE8,TrEMBL:I0IK22;Derives_from=GSCOCT00040873001;Name=Cc01_g03970;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,CC_EC_number:1.3.1.45,PRODUCT:Isoflavone reductase homolog P3,CC_functional_completeness:complete,CC_gene:At1g75280,CC_gene:IRL;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040873001~ Isoflavone reductase homolog P3~ At1g75280~ complete;original_location=complement(join(550499..550681%2C550245..550379%2C549547..549784%2C549195..549398%2C548948..549114));owner=coffea | |
| 4747 chr1 manual_curation exon 10192909 10193075 . + . Parent=GSCOCT00040873001 | |
| 4748 chr1 manual_curation exon 10192625 10192828 . + . Parent=GSCOCT00040873001 | |
| 4749 chr1 manual_curation exon 10192239 10192476 . + . Parent=GSCOCT00040873001 | |
| 4750 chr1 manual_curation exon 10191644 10191778 . + . Parent=GSCOCT00040873001 | |
| 4751 chr1 manual_curation exon 10191146 10191524 . + . Parent=GSCOCT00040873001 | |
| 4752 chr1 manual_curation CDS 10192909 10193075 . + 1 Parent=GSCOCT00040873001 | |
| 4753 chr1 manual_curation CDS 10192625 10192828 . + 1 Parent=GSCOCT00040873001 | |
| 4754 chr1 manual_curation CDS 10192239 10192476 . + 0 Parent=GSCOCT00040873001 | |
| 4755 chr1 manual_curation CDS 10191644 10191778 . + 0 Parent=GSCOCT00040873001 | |
| 4756 chr1 manual_curation CDS 10191342 10191524 . + 0 Parent=GSCOCT00040873001 | |
| 4757 chr1 manual_curation gene 10307009 10309087 . + . ID=GSCOCG00040868001;Name=Cc01_g03980 | |
| 4758 chr1 manual_curation mRNA 10307009 10309087 . + . ID=GSCOCT00040868001;Parent=GSCOCG00040868001;Name=Cc01_g03980 | |
| 4759 chr1 manual_curation polypeptide 10307009 10309087 . + . ID=GSCOCP00040868001;Dbxref=InterPro:IPR000719,InterPro:IPR001480,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF01453,PROFILE:PS50011,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF51110,SUPERFAMILY:SSF56112,SwissProt:Q39202,SwissProt:Q8RWZ5,SwissProt:Q9XID3,TAIR:AT1G34300.1,TAIR:AT4G32300.1,TAIR:AT5G60900.1,TrEMBL:B9GYW0,TrEMBL:B9P4Z0,TrEMBL:I1J9S8;Derives_from=GSCOCT00040868001;Name=Cc01_g03980;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0005529,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative G-type lectin S-receptor-like serine/threonine-protein kinase RLK1,CC_functional_completeness:fragment,CC_gene:RLK1,CC_gene:SD25,CC_gene:At1g34300;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040868001~ Putative G-type lectin S-receptor-like serine/threonine-protein kinase RLK1~ RLK1~ fragment;original_location=complement(join(434054..435014%2C432936..433726));owner=coffea | |
| 4760 chr1 manual_curation exon 10308297 10309087 . + . Parent=GSCOCT00040868001 | |
| 4761 chr1 manual_curation exon 10307009 10307969 . + . Parent=GSCOCT00040868001 | |
| 4762 chr1 manual_curation CDS 10308297 10309087 . + 1 Parent=GSCOCT00040868001 | |
| 4763 chr1 manual_curation CDS 10307009 10307969 . + 0 Parent=GSCOCT00040868001 | |
| 4764 chr1 manual_curation gene 10363861 10365848 . + . ID=GSCOCG00040860001;Name=Cc01_g03990 | |
| 4765 chr1 manual_curation mRNA 10363861 10365848 . + . ID=GSCOCT00040860001;Parent=GSCOCG00040860001;Name=Cc01_g03990 | |
| 4766 chr1 manual_curation polypeptide 10363861 10365567 . + . ID=GSCOCP00040860001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR008030,InterPro:IPR016040,PFAM:PF05368,SwissProt:P52577,SwissProt:P52578,SwissProt:P52580,TAIR:AT1G75280.1,TAIR:AT1G75290.1,TAIR:AT4G39230.1,TrEMBL:B2WSN1,TrEMBL:B6VRE8,TrEMBL:I0IK22;Derives_from=GSCOCT00040860001;Name=Cc01_g03990;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,CC_EC_number:1.3.1.45,PRODUCT:Isoflavone reductase homolog P3,CC_functional_completeness:complete,CC_gene:At1g75280,CC_gene:IRL;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040860001~ Isoflavone reductase homolog P3~ At1g75280~ complete;original_location=complement(join(377980..378162%2C377834..377860%2C377721..377762%2C376991..377228%2C376456..376844));owner=coffea | |
| 4767 chr1 manual_curation exon 10365179 10365848 . + . Parent=GSCOCT00040860001 | |
| 4768 chr1 manual_curation exon 10364795 10365032 . + . Parent=GSCOCT00040860001 | |
| 4769 chr1 manual_curation exon 10364261 10364302 . + . Parent=GSCOCT00040860001 | |
| 4770 chr1 manual_curation exon 10364163 10364189 . + . Parent=GSCOCT00040860001 | |
| 4771 chr1 manual_curation exon 10363861 10364043 . + . Parent=GSCOCT00040860001 | |
| 4772 chr1 manual_curation CDS 10365179 10365567 . + 1 Parent=GSCOCT00040860001 | |
| 4773 chr1 manual_curation CDS 10364795 10365032 . + 0 Parent=GSCOCT00040860001 | |
| 4774 chr1 manual_curation CDS 10364261 10364302 . + 0 Parent=GSCOCT00040860001 | |
| 4775 chr1 manual_curation CDS 10364163 10364189 . + 0 Parent=GSCOCT00040860001 | |
| 4776 chr1 manual_curation CDS 10363861 10364043 . + 0 Parent=GSCOCT00040860001 | |
| 4777 chr1 manual_curation gene 10403349 10405015 . - . ID=GSCOCG00040857001;Name=Cc01_g04000 | |
| 4778 chr1 manual_curation mRNA 10403349 10405015 . - . ID=GSCOCT00040857001;Parent=GSCOCG00040857001;Name=Cc01_g04000 | |
| 4779 chr1 manual_curation polypeptide 10404366 10404690 . - . ID=GSCOCP00040857001;Derives_from=GSCOCT00040857001;Name=Cc01_g04000;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040857001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(337333..337389%2C337496..337657);owner=coffea | |
| 4780 chr1 manual_curation exon 10404634 10405015 . - . Parent=GSCOCT00040857001 | |
| 4781 chr1 manual_curation exon 10403349 10404527 . - . Parent=GSCOCT00040857001 | |
| 4782 chr1 manual_curation CDS 10404634 10404690 . - 0 Parent=GSCOCT00040857001 | |
| 4783 chr1 manual_curation CDS 10404366 10404527 . - 0 Parent=GSCOCT00040857001 | |
| 4784 chr1 manual_curation gene 10405091 10407548 . + . ID=GSCOCG00040856001;Name=Cc01_g04010 | |
| 4785 chr1 manual_curation mRNA 10405091 10407548 . + . ID=GSCOCT00040856001;Parent=GSCOCG00040856001;Name=Cc01_g04010 | |
| 4786 chr1 manual_curation polypeptide 10405091 10407548 . + . ID=GSCOCP00040856001;Dbxref=InterPro:IPR008030,PFAM:PF05368,SwissProt:P52577,SwissProt:P52578,SwissProt:P52580,TAIR:AT1G75280.1,TAIR:AT1G75290.1,TAIR:AT4G39230.1,TrEMBL:F6I0K9,TrEMBL:O81355,TrEMBL:Q1W3B1;Derives_from=GSCOCT00040856001;Name=Cc01_g04010;Ontology_term=CC_evidence_code:ISS,CC_EC_number:1.3.1.45,PRODUCT:Isoflavone reductase homolog P3,CC_functional_completeness:complete,CC_gene:At1g75280,CC_gene:IRL;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040856001~ Isoflavone reductase homolog P3~ At1g75280~ complete;original_location=complement(join(336900..336932%2C336600..336734%2C335243..335314%2C334982..335072%2C334738..334926%2C334475..334638));owner=coffea | |
| 4787 chr1 manual_curation exon 10407385 10407548 . + . Parent=GSCOCT00040856001 | |
| 4788 chr1 manual_curation exon 10407097 10407285 . + . Parent=GSCOCT00040856001 | |
| 4789 chr1 manual_curation exon 10406951 10407041 . + . Parent=GSCOCT00040856001 | |
| 4790 chr1 manual_curation exon 10406709 10406780 . + . Parent=GSCOCT00040856001 | |
| 4791 chr1 manual_curation exon 10405289 10405423 . + . Parent=GSCOCT00040856001 | |
| 4792 chr1 manual_curation exon 10405091 10405123 . + . Parent=GSCOCT00040856001 | |
| 4793 chr1 manual_curation CDS 10407385 10407548 . + 1 Parent=GSCOCT00040856001 | |
| 4794 chr1 manual_curation CDS 10407097 10407285 . + 1 Parent=GSCOCT00040856001 | |
| 4795 chr1 manual_curation CDS 10406951 10407041 . + 0 Parent=GSCOCT00040856001 | |
| 4796 chr1 manual_curation CDS 10406709 10406780 . + 0 Parent=GSCOCT00040856001 | |
| 4797 chr1 manual_curation CDS 10405289 10405423 . + 0 Parent=GSCOCT00040856001 | |
| 4798 chr1 manual_curation CDS 10405091 10405123 . + 0 Parent=GSCOCT00040856001 | |
| 4799 chr1 manual_curation gene 10536770 10537063 . - . ID=GSCOCG00040853001;Name=Cc01_g04020 | |
| 4800 chr1 manual_curation mRNA 10536770 10537063 . - . ID=GSCOCT00040853001;Parent=GSCOCG00040853001;Name=Cc01_g04020 | |
| 4801 chr1 manual_curation polypeptide 10536770 10537063 . - . ID=GSCOCP00040853001;Dbxref=InterPro:IPR000626,InterPro:IPR019955,InterPro:IPR019956,PFAM:PF00240,PRINTS:PR00348,PROFILE:PS50053,SwissProt:P59232,SwissProt:P59233,SwissProt:P62981,TAIR:AT1G23410.1,TAIR:AT2G47110.1,TAIR:AT3G62250.1,TrEMBL:A0MKC8,TrEMBL:B8P7F5,TrEMBL:Q9SEK7;Derives_from=GSCOCT00040853001;Name=Cc01_g04020;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Ubiquitin-40S ribosomal protein S27a-3,CC_functional_completeness:fragment,CC_gene:RPS27AC,CC_gene:RPS27AB,CC_gene:UBI3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040853001~ Ubiquitin-40S ribosomal protein S27a-3~ RPS27AC~ fragment;original_location=204960..205253;owner=coffea | |
| 4802 chr1 manual_curation exon 10536770 10537063 . - . Parent=GSCOCT00040853001 | |
| 4803 chr1 manual_curation CDS 10536770 10537063 . - 0 Parent=GSCOCT00040853001 | |
| 4804 chr1 manual_curation gene 10545664 10547685 . + . ID=GSCOCG00040852001;Name=Cc01_g04030 | |
| 4805 chr1 manual_curation mRNA 10545664 10547685 . + . ID=GSCOCT00040852001;Parent=GSCOCG00040852001;Name=Cc01_g04030 | |
| 4806 chr1 manual_curation polypeptide 10545664 10547685 . + . ID=GSCOCP00040852001;Dbxref=InterPro:IPR000719,InterPro:IPR000858,InterPro:IPR001480,InterPro:IPR002290,InterPro:IPR003609,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00954,PFAM:PF01453,PROFILE:PS50011,PROFILE:PS50948,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF51110,SUPERFAMILY:SSF56112,SwissProt:O64477,SwissProt:Q39202,SwissProt:Q8RWZ5,TAIR:AT2G19130.1,TAIR:AT4G32300.1,TAIR:AT5G60900.1,TrEMBL:B9GYW0,TrEMBL:B9NFQ3,TrEMBL:B9NGV9;Derives_from=GSCOCT00040852001;Name=Cc01_g04030;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0005529,GO:0006468,GO:0048544,CC_EC_number:2.7.11.25,PRODUCT:Putative G-type lectin S-receptor-like serine/threonine-protein kinase RLK1,CC_functional_completeness:complete,CC_gene:RLK1,CC_gene:SD25,CC_gene:At2g19130;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040852001~ Putative G-type lectin S-receptor-like serine/threonine-protein kinase RLK1~ RLK1~ complete;original_location=complement(join(195441..196359%2C194338..195317));owner=coffea | |
| 4807 chr1 manual_curation exon 10546706 10547685 . + . Parent=GSCOCT00040852001 | |
| 4808 chr1 manual_curation exon 10545664 10546582 . + . Parent=GSCOCT00040852001 | |
| 4809 chr1 manual_curation CDS 10546706 10547685 . + 1 Parent=GSCOCT00040852001 | |
| 4810 chr1 manual_curation CDS 10545664 10546582 . + 0 Parent=GSCOCT00040852001 | |
| 4811 chr1 manual_curation gene 10596290 10602053 . + . ID=GSCOCG00040851001;Name=Cc01_g04040 | |
| 4812 chr1 manual_curation mRNA 10596290 10602053 . + . ID=GSCOCT00040851001;Parent=GSCOCG00040851001;Name=Cc01_g04040 | |
| 4813 chr1 manual_curation polypeptide 10596290 10602053 . + . ID=GSCOCP00040851001;Dbxref=InterPro:IPR007196,PFAM:PF04054,TrEMBL:B9EY76,TrEMBL:B9F5G1,TrEMBL:Q0E1C0;Derives_from=GSCOCT00040851001;Name=Cc01_g04040;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative CCR4-Not complex component%2C Not1,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040851001~ Putative CCR4-Not complex component%2C Not1~ unknown_gene~ complete;original_location=complement(join(145553..145733%2C141583..142398%2C141353..141429%2C140612..140996%2C140166..140227%2C139970..140098));owner=coffea | |
| 4814 chr1 manual_curation exon 10601925 10602053 . + . Parent=GSCOCT00040851001 | |
| 4815 chr1 manual_curation exon 10601796 10601857 . + . Parent=GSCOCT00040851001 | |
| 4816 chr1 manual_curation exon 10601027 10601411 . + . Parent=GSCOCT00040851001 | |
| 4817 chr1 manual_curation exon 10600594 10600670 . + . Parent=GSCOCT00040851001 | |
| 4818 chr1 manual_curation exon 10599625 10600440 . + . Parent=GSCOCT00040851001 | |
| 4819 chr1 manual_curation exon 10596290 10596470 . + . Parent=GSCOCT00040851001 | |
| 4820 chr1 manual_curation CDS 10601925 10602053 . + 0 Parent=GSCOCT00040851001 | |
| 4821 chr1 manual_curation CDS 10601796 10601857 . + 1 Parent=GSCOCT00040851001 | |
| 4822 chr1 manual_curation CDS 10601027 10601411 . + 0 Parent=GSCOCT00040851001 | |
| 4823 chr1 manual_curation CDS 10600594 10600670 . + 1 Parent=GSCOCT00040851001 | |
| 4824 chr1 manual_curation CDS 10599625 10600440 . + 1 Parent=GSCOCT00040851001 | |
| 4825 chr1 manual_curation CDS 10596290 10596470 . + 0 Parent=GSCOCT00040851001 | |
| 4826 chr1 manual_curation gene 10702618 10705011 . + . ID=GSCOCG00040848001;Name=Cc01_g04050 | |
| 4827 chr1 manual_curation mRNA 10702618 10705011 . + . ID=GSCOCT00040848001;Parent=GSCOCG00040848001;Name=Cc01_g04050 | |
| 4828 chr1 manual_curation polypeptide 10702618 10705011 . + . ID=GSCOCP00040848001;Dbxref=InterPro:IPR000719,InterPro:IPR000858,InterPro:IPR001480,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00954,PFAM:PF01453,PROFILE:PS50011,PROFILE:PS50927,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF51110,SUPERFAMILY:SSF56112,SwissProt:Q39202,SwissProt:Q9FLV4,SwissProt:Q9XID3,TAIR:AT1G34300.1,TAIR:AT2G19130.1,TAIR:AT5G60900.1,TrEMBL:B9NFQ3,TrEMBL:B9NGV9,TrEMBL:Q0ZCC5;Derives_from=GSCOCT00040848001;Name=Cc01_g04050;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0005529,GO:0006468,GO:0048544,CC_EC_number:2.7.11.25,PRODUCT:Putative G-type lectin S-receptor-like serine/threonine-protein kinase RLK1,CC_functional_completeness:complete,CC_gene:RLK1,CC_gene:At5g24080,CC_gene:At1g34300;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040848001~ Putative G-type lectin S-receptor-like serine/threonine-protein kinase RLK1~ RLK1~ complete;original_location=complement(37012..39405);owner=coffea | |
| 4829 chr1 manual_curation exon 10702618 10705011 . + . Parent=GSCOCT00040848001 | |
| 4830 chr1 manual_curation CDS 10702618 10705011 . + 0 Parent=GSCOCT00040848001 | |
| 4831 chr1 manual_curation gene 10752168 10764896 . - . ID=GSCOCG00039270001;Name=Cc01_g04060 | |
| 4832 chr1 manual_curation mRNA 10752168 10764896 . - . ID=GSCOCT00039270001;Parent=GSCOCG00039270001;Name=Cc01_g04060 | |
| 4833 chr1 manual_curation polypeptide 10752168 10764834 . - . ID=GSCOCP00039270001;Dbxref=GENE3D:G3DSA:2.60.60.20,InterPro:IPR000907,InterPro:IPR001024,InterPro:IPR001246,InterPro:IPR008976,InterPro:IPR013819,InterPro:IPR020833,InterPro:IPR020834,PANTHER:PTHR11771,PFAM:PF00305,PFAM:PF01477,PRINTS:PR00087,PRINTS:PR00468,PROFILE:PS50095,PROFILE:PS51393,PROSITE:PS00081,PROSITE:PS00711,SMART:SM00308,SUPERFAMILY:SSF48484,SUPERFAMILY:SSF49723,SwissProt:O24370,SwissProt:P38418,SwissProt:Q84YK8,TAIR:AT1G17420.1,TAIR:AT1G72520.1,TAIR:AT3G45140.1,TrEMBL:C4NZX3,TrEMBL:E3UIM5,TrEMBL:Q6X5R6;Derives_from=GSCOCT00039270001;Name=Cc01_g04060;Ontology_term=CC_evidence_code:ISS,GO:0005506,GO:0016165,GO:0046872,GO:0055114,CC_EC_number:1.13.11.12,PRODUCT:Linoleate 13S-lipoxygenase 2-1%2C chloroplastic,CC_functional_completeness:complete,CC_gene:LOX2.1,CC_gene:LOX2,CC_gene:CM-LOX2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00039270001~ Linoleate 13S-lipoxygenase 2-1%2C chloroplastic~ LOX2.1~ complete;original_location=complement(join(22367..22712%2C20567..20835%2C18018..18255%2C13641..13961%2C12821..12906%2C12273..12383%2C11866..12167%2C11268..11534%2C10340..10805%2C10046..10153));owner=coffea | |
| 4834 chr1 manual_curation exon 10752168 10752275 . - . Parent=GSCOCT00039270001 | |
| 4835 chr1 manual_curation exon 10752462 10752927 . - . Parent=GSCOCT00039270001 | |
| 4836 chr1 manual_curation exon 10753390 10753656 . - . Parent=GSCOCT00039270001 | |
| 4837 chr1 manual_curation exon 10753988 10754289 . - . Parent=GSCOCT00039270001 | |
| 4838 chr1 manual_curation exon 10754395 10754505 . - . Parent=GSCOCT00039270001 | |
| 4839 chr1 manual_curation exon 10754943 10755028 . - . Parent=GSCOCT00039270001 | |
| 4840 chr1 manual_curation exon 10755763 10756083 . - . Parent=GSCOCT00039270001 | |
| 4841 chr1 manual_curation exon 10760140 10760377 . - . Parent=GSCOCT00039270001 | |
| 4842 chr1 manual_curation exon 10762689 10762957 . - . Parent=GSCOCT00039270001 | |
| 4843 chr1 manual_curation exon 10764489 10764896 . - . Parent=GSCOCT00039270001 | |
| 4844 chr1 manual_curation CDS 10752168 10752275 . - 0 Parent=GSCOCT00039270001 | |
| 4845 chr1 manual_curation CDS 10752462 10752927 . - 2 Parent=GSCOCT00039270001 | |
| 4846 chr1 manual_curation CDS 10753390 10753656 . - 2 Parent=GSCOCT00039270001 | |
| 4847 chr1 manual_curation CDS 10753988 10754289 . - 0 Parent=GSCOCT00039270001 | |
| 4848 chr1 manual_curation CDS 10754395 10754505 . - 0 Parent=GSCOCT00039270001 | |
| 4849 chr1 manual_curation CDS 10754943 10755028 . - 1 Parent=GSCOCT00039270001 | |
| 4850 chr1 manual_curation CDS 10755763 10756083 . - 1 Parent=GSCOCT00039270001 | |
| 4851 chr1 manual_curation CDS 10760140 10760377 . - 0 Parent=GSCOCT00039270001 | |
| 4852 chr1 manual_curation CDS 10762689 10762957 . - 1 Parent=GSCOCT00039270001 | |
| 4853 chr1 manual_curation CDS 10764489 10764834 . - 0 Parent=GSCOCT00039270001 | |
| 4854 chr1 manual_curation gene 10832402 10840645 . + . ID=GSCOCG00039274001;Name=Cc01_g04070 | |
| 4855 chr1 manual_curation mRNA 10832402 10840645 . + . ID=GSCOCT00039274001;Parent=GSCOCG00039274001;Name=Cc01_g04070 | |
| 4856 chr1 manual_curation polypeptide 10832498 10840376 . + . ID=GSCOCP00039274001;Dbxref=GENE3D:G3DSA:3.30.230.10,GENE3D:G3DSA:3.30.565.10,InterPro:IPR003594,InterPro:IPR010979,InterPro:IPR014721,InterPro:IPR015320,InterPro:IPR020568,PFAM:PF02518,PFAM:PF09239,PRODOM:PD013790,SUPERFAMILY:SSF46946,SUPERFAMILY:SSF54211,SUPERFAMILY:SSF55874,SwissProt:C3NHT6,SwissProt:Q9C5V6,SwissProt:Q9YE64,TAIR:AT3G20780.1,TrEMBL:D7SLA7,TrEMBL:G7IHQ9,TrEMBL:I1M541;Derives_from=GSCOCT00039274001;Name=Cc01_g04070;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0003677,GO:0003918,GO:0005524,GO:0005694,GO:0006265,CC_EC_number:5.99.1.3,PRODUCT:DNA topoisomerase 6 subunit B,CC_functional_completeness:complete,CC_gene:TOP6B,CC_gene:top6B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00039274001~ DNA topoisomerase 6 subunit B~ TOP6B~ complete;original_location=join(90376..90469%2C90640..90692%2C91201..91298%2C91405..91510%2C91684..91821%2C91977..92028%2C92236..92300%2C92547..92653%2C92763..92865%2C93092..93177%2C93336..93532%2C94248..94363%2C94488..94573%2C94671..94743%2C96493..96584%2C96767..96905%2C96981..97075%2C97150..97324%2C98108..98254);owner=coffea | |
| 4857 chr1 manual_curation exon 10832402 10832591 . + . Parent=GSCOCT00039274001 | |
| 4858 chr1 manual_curation exon 10832762 10832814 . + . Parent=GSCOCT00039274001 | |
| 4859 chr1 manual_curation exon 10833323 10833420 . + . Parent=GSCOCT00039274001 | |
| 4860 chr1 manual_curation exon 10833527 10833632 . + . Parent=GSCOCT00039274001 | |
| 4861 chr1 manual_curation exon 10833806 10833943 . + . Parent=GSCOCT00039274001 | |
| 4862 chr1 manual_curation exon 10834099 10834150 . + . Parent=GSCOCT00039274001 | |
| 4863 chr1 manual_curation exon 10834358 10834422 . + . Parent=GSCOCT00039274001 | |
| 4864 chr1 manual_curation exon 10834669 10834775 . + . Parent=GSCOCT00039274001 | |
| 4865 chr1 manual_curation exon 10834885 10834987 . + . Parent=GSCOCT00039274001 | |
| 4866 chr1 manual_curation exon 10835214 10835299 . + . Parent=GSCOCT00039274001 | |
| 4867 chr1 manual_curation exon 10835458 10835654 . + . Parent=GSCOCT00039274001 | |
| 4868 chr1 manual_curation exon 10836370 10836485 . + . Parent=GSCOCT00039274001 | |
| 4869 chr1 manual_curation exon 10836610 10836695 . + . Parent=GSCOCT00039274001 | |
| 4870 chr1 manual_curation exon 10836793 10836865 . + . Parent=GSCOCT00039274001 | |
| 4871 chr1 manual_curation exon 10838615 10838706 . + . Parent=GSCOCT00039274001 | |
| 4872 chr1 manual_curation exon 10838889 10839027 . + . Parent=GSCOCT00039274001 | |
| 4873 chr1 manual_curation exon 10839103 10839197 . + . Parent=GSCOCT00039274001 | |
| 4874 chr1 manual_curation exon 10839272 10839446 . + . Parent=GSCOCT00039274001 | |
| 4875 chr1 manual_curation exon 10840230 10840645 . + . Parent=GSCOCT00039274001 | |
| 4876 chr1 manual_curation CDS 10832498 10832591 . + 0 Parent=GSCOCT00039274001 | |
| 4877 chr1 manual_curation CDS 10832762 10832814 . + 1 Parent=GSCOCT00039274001 | |
| 4878 chr1 manual_curation CDS 10833323 10833420 . + 0 Parent=GSCOCT00039274001 | |
| 4879 chr1 manual_curation CDS 10833527 10833632 . + 2 Parent=GSCOCT00039274001 | |
| 4880 chr1 manual_curation CDS 10833806 10833943 . + 0 Parent=GSCOCT00039274001 | |
| 4881 chr1 manual_curation CDS 10834099 10834150 . + 0 Parent=GSCOCT00039274001 | |
| 4882 chr1 manual_curation CDS 10834358 10834422 . + 1 Parent=GSCOCT00039274001 | |
| 4883 chr1 manual_curation CDS 10834669 10834775 . + 0 Parent=GSCOCT00039274001 | |
| 4884 chr1 manual_curation CDS 10834885 10834987 . + 2 Parent=GSCOCT00039274001 | |
| 4885 chr1 manual_curation CDS 10835214 10835299 . + 0 Parent=GSCOCT00039274001 | |
| 4886 chr1 manual_curation CDS 10835458 10835654 . + 2 Parent=GSCOCT00039274001 | |
| 4887 chr1 manual_curation CDS 10836370 10836485 . + 1 Parent=GSCOCT00039274001 | |
| 4888 chr1 manual_curation CDS 10836610 10836695 . + 0 Parent=GSCOCT00039274001 | |
| 4889 chr1 manual_curation CDS 10836793 10836865 . + 2 Parent=GSCOCT00039274001 | |
| 4890 chr1 manual_curation CDS 10838615 10838706 . + 0 Parent=GSCOCT00039274001 | |
| 4891 chr1 manual_curation CDS 10838889 10839027 . + 2 Parent=GSCOCT00039274001 | |
| 4892 chr1 manual_curation CDS 10839103 10839197 . + 0 Parent=GSCOCT00039274001 | |
| 4893 chr1 manual_curation CDS 10839272 10839446 . + 2 Parent=GSCOCT00039274001 | |
| 4894 chr1 manual_curation CDS 10840230 10840376 . + 0 Parent=GSCOCT00039274001 | |
| 4895 chr1 manual_curation gene 10840741 10847305 . - . ID=GSCOCG00039275001;Name=Cc01_g04080 | |
| 4896 chr1 manual_curation mRNA 10840741 10847305 . - . ID=GSCOCT00039275001;Parent=GSCOCG00039275001;Name=Cc01_g04080 | |
| 4897 chr1 manual_curation polypeptide 10840741 10847305 . - . ID=GSCOCP00039275001;Dbxref=GENE3D:G3DSA:2.40.180.10,InterPro:IPR000873,InterPro:IPR006162,InterPro:IPR006163,InterPro:IPR009081,InterPro:IPR011004,InterPro:IPR011614,InterPro:IPR018028,InterPro:IPR020806,InterPro:IPR020835,InterPro:IPR020845,PFAM:PF00199,PFAM:PF00501,PFAM:PF00550,PROFILE:PS50075,PROFILE:PS51402,PROSITE:PS00012,PROSITE:PS00455,SMART:SM00823,SUPERFAMILY:SSF47336,SUPERFAMILY:SSF51161,SUPERFAMILY:SSF56634,SwissProt:B2HIL4,SwissProt:B2HIM0,SwissProt:B2HIN2,TAIR:AT1G20480.1,TAIR:AT1G62940.1,TAIR:AT3G21230.1,TrEMBL:B9RI78,TrEMBL:F6GUA1,TrEMBL:G7IUG4;Derives_from=GSCOCT00039275001;Name=Cc01_g04080;Ontology_term=CC_evidence_code:ISS,GO:0000036,GO:0003824,GO:0004096,GO:0006979,GO:0008152,GO:0016740,GO:0031177,GO:0048037,GO:0055114,CC_EC_number:4.2.1.92,CC_EC_number:4.2.1.92,PRODUCT:Putative Long-chain-fatty-acid--AMP ligase FadD28,CC_functional_completeness:modules,CC_gene:fadD28,CC_gene:fadD26,CC_gene:fadD29;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00039275001~ Putative Long-chain-fatty-acid--AMP ligase FadD28~ fadD28~ modules;original_location=complement(join(104960..105183%2C104062..104866%2C103508..103989%2C103182..103441%2C102427..102887%2C100952..101186%2C98619..100840));owner=coffea | |
| 4898 chr1 manual_curation exon 10840741 10842962 . - . Parent=GSCOCT00039275001 | |
| 4899 chr1 manual_curation exon 10843074 10843308 . - . Parent=GSCOCT00039275001 | |
| 4900 chr1 manual_curation exon 10844549 10845009 . - . Parent=GSCOCT00039275001 | |
| 4901 chr1 manual_curation exon 10845304 10845563 . - . Parent=GSCOCT00039275001 | |
| 4902 chr1 manual_curation exon 10845630 10846111 . - . Parent=GSCOCT00039275001 | |
| 4903 chr1 manual_curation exon 10846184 10846988 . - . Parent=GSCOCT00039275001 | |
| 4904 chr1 manual_curation exon 10847082 10847305 . - . Parent=GSCOCT00039275001 | |
| 4905 chr1 manual_curation CDS 10840741 10842962 . - 1 Parent=GSCOCT00039275001 | |
| 4906 chr1 manual_curation CDS 10843074 10843308 . - 0 Parent=GSCOCT00039275001 | |
| 4907 chr1 manual_curation CDS 10844549 10845009 . - 1 Parent=GSCOCT00039275001 | |
| 4908 chr1 manual_curation CDS 10845304 10845563 . - 2 Parent=GSCOCT00039275001 | |
| 4909 chr1 manual_curation CDS 10845630 10846111 . - 0 Parent=GSCOCT00039275001 | |
| 4910 chr1 manual_curation CDS 10846184 10846988 . - 2 Parent=GSCOCT00039275001 | |
| 4911 chr1 manual_curation CDS 10847082 10847305 . - 0 Parent=GSCOCT00039275001 | |
| 4912 chr1 manual_curation gene 10847594 10848188 . - . ID=GSCOCG00039276001;Name=Cc01_g04090 | |
| 4913 chr1 manual_curation mRNA 10847594 10848188 . - . ID=GSCOCT00039276001;Parent=GSCOCG00039276001;Name=Cc01_g04090 | |
| 4914 chr1 manual_curation polypeptide 10847594 10848188 . - . ID=GSCOCP00039276001;Dbxref=TrEMBL:A5B1G8,TrEMBL:F6GUA1,TrEMBL:G7IUG4;Derives_from=GSCOCT00039276001;Name=Cc01_g04090;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00039276001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=complement(join(105730..106066%2C105472..105656));owner=coffea | |
| 4915 chr1 manual_curation exon 10847594 10847778 . - . Parent=GSCOCT00039276001 | |
| 4916 chr1 manual_curation exon 10847852 10848188 . - . Parent=GSCOCT00039276001 | |
| 4917 chr1 manual_curation CDS 10847594 10847778 . - 1 Parent=GSCOCT00039276001 | |
| 4918 chr1 manual_curation CDS 10847852 10848188 . - 0 Parent=GSCOCT00039276001 | |
| 4919 chr1 manual_curation gene 10848271 10849653 . - . ID=GSCOCG00039277001;Name=Cc01_g04100 | |
| 4920 chr1 manual_curation mRNA 10848271 10849653 . - . ID=GSCOCT00039277001;Parent=GSCOCG00039277001;Name=Cc01_g04100 | |
| 4921 chr1 manual_curation polypeptide 10848271 10849653 . - . ID=GSCOCP00039277001;Dbxref=InterPro:IPR002937,PFAM:PF01593,TrEMBL:A5B1G8,TrEMBL:B9GVW7,TrEMBL:G7IUG4;Derives_from=GSCOCT00039277001;Name=Cc01_g04100;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00039277001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=complement(join(107330..107531%2C106704..106906%2C106149..106610));owner=coffea | |
| 4922 chr1 manual_curation exon 10848271 10848732 . - . Parent=GSCOCT00039277001 | |
| 4923 chr1 manual_curation exon 10848826 10849028 . - . Parent=GSCOCT00039277001 | |
| 4924 chr1 manual_curation exon 10849452 10849653 . - . Parent=GSCOCT00039277001 | |
| 4925 chr1 manual_curation CDS 10848271 10848732 . - 0 Parent=GSCOCT00039277001 | |
| 4926 chr1 manual_curation CDS 10848826 10849028 . - 1 Parent=GSCOCT00039277001 | |
| 4927 chr1 manual_curation CDS 10849452 10849653 . - 0 Parent=GSCOCT00039277001 | |
| 4928 chr1 manual_curation gene 10968774 10970299 . - . ID=GSCOCG00039279001;Name=Cc01_g04110 | |
| 4929 chr1 manual_curation mRNA 10968774 10970299 . - . ID=GSCOCT00039279001;Parent=GSCOCG00039279001;Name=Cc01_g04110 | |
| 4930 chr1 manual_curation polypeptide 10968774 10970299 . - . ID=GSCOCP00039279001;Dbxref=SwissProt:P63154,SwissProt:P63155,SwissProt:Q9BZJ0,TAIR:AT3G51110.1,TAIR:AT5G41770.1,TAIR:AT5G45990.1,TrEMBL:A5BWC0,TrEMBL:B9GL87,TrEMBL:B9GX70;Derives_from=GSCOCT00039279001;Name=Cc01_g04110;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:crooked neck protein%2C putative / cell cycle protein%2C putative,CC_functional_completeness:fragment,CC_gene:Crnkl1,CC_gene:CRNKL1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00039279001~ crooked neck protein%2C putative / cell cycle protein%2C putative~ Crnkl1~ fragment;original_location=complement(join(228057..228177%2C227773..227994%2C226652..226809));owner=coffea | |
| 4931 chr1 manual_curation exon 10968774 10968931 . - . Parent=GSCOCT00039279001 | |
| 4932 chr1 manual_curation exon 10969895 10970116 . - . Parent=GSCOCT00039279001 | |
| 4933 chr1 manual_curation exon 10970179 10970299 . - . Parent=GSCOCT00039279001 | |
| 4934 chr1 manual_curation CDS 10968774 10968931 . - 1 Parent=GSCOCT00039279001 | |
| 4935 chr1 manual_curation CDS 10969895 10970116 . - 1 Parent=GSCOCT00039279001 | |
| 4936 chr1 manual_curation CDS 10970179 10970299 . - 0 Parent=GSCOCT00039279001 | |
| 4937 chr1 manual_curation gene 11013773 11020894 . + . ID=GSCOCG00039281001;Name=Cc01_g04120 | |
| 4938 chr1 manual_curation mRNA 11013773 11020894 . + . ID=GSCOCT00039281001;Parent=GSCOCG00039281001;Name=Cc01_g04120 | |
| 4939 chr1 manual_curation polypeptide 11014076 11020408 . + . ID=GSCOCP00039281001;Dbxref=InterPro:IPR004087,InterPro:IPR004088,InterPro:IPR018111,PFAM:PF00013,PROFILE:PS50084,SMART:SM00322,SwissProt:P58223,SwissProt:Q9PW80,TAIR:AT1G51580.1,TAIR:AT5G15270.2,TAIR:AT5G53060.1,TrEMBL:B9I1X8,TrEMBL:F6H7A0,TrEMBL:I1JYP9;Derives_from=GSCOCT00039281001;Name=Cc01_g04120;Ontology_term=CC_evidence_code:ISS,GO:0003723,CC_EC_number:missing_EC_number,PRODUCT:Putative KH domain-containing protein At4g18375,CC_functional_completeness:complete,CC_gene:At4g18375,CC_gene:igf2bp3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00039281001~ Putative KH domain-containing protein At4g18375~ At4g18375~ complete;original_location=join(271954..272041%2C272099..272610%2C274996..275469%2C276330..276578%2C276978..277259%2C277609..277688%2C277765..277873%2C277977..278103%2C278267..278286);owner=coffea | |
| 4940 chr1 manual_curation exon 11013773 11014163 . + . Parent=GSCOCT00039281001 | |
| 4941 chr1 manual_curation exon 11014221 11014732 . + . Parent=GSCOCT00039281001 | |
| 4942 chr1 manual_curation exon 11017118 11017591 . + . Parent=GSCOCT00039281001 | |
| 4943 chr1 manual_curation exon 11018452 11018700 . + . Parent=GSCOCT00039281001 | |
| 4944 chr1 manual_curation exon 11019100 11019381 . + . Parent=GSCOCT00039281001 | |
| 4945 chr1 manual_curation exon 11019731 11019810 . + . Parent=GSCOCT00039281001 | |
| 4946 chr1 manual_curation exon 11019887 11019995 . + . Parent=GSCOCT00039281001 | |
| 4947 chr1 manual_curation exon 11020099 11020225 . + . Parent=GSCOCT00039281001 | |
| 4948 chr1 manual_curation exon 11020389 11020894 . + . Parent=GSCOCT00039281001 | |
| 4949 chr1 manual_curation CDS 11014076 11014163 . + 0 Parent=GSCOCT00039281001 | |
| 4950 chr1 manual_curation CDS 11014221 11014732 . + 1 Parent=GSCOCT00039281001 | |
| 4951 chr1 manual_curation CDS 11017118 11017591 . + 0 Parent=GSCOCT00039281001 | |
| 4952 chr1 manual_curation CDS 11018452 11018700 . + 0 Parent=GSCOCT00039281001 | |
| 4953 chr1 manual_curation CDS 11019100 11019381 . + 0 Parent=GSCOCT00039281001 | |
| 4954 chr1 manual_curation CDS 11019731 11019810 . + 0 Parent=GSCOCT00039281001 | |
| 4955 chr1 manual_curation CDS 11019887 11019995 . + 2 Parent=GSCOCT00039281001 | |
| 4956 chr1 manual_curation CDS 11020099 11020225 . + 0 Parent=GSCOCT00039281001 | |
| 4957 chr1 manual_curation CDS 11020389 11020408 . + 1 Parent=GSCOCT00039281001 | |
| 4958 chr1 manual_curation gene 11083890 11088235 . + . ID=GSCOCG00039283001;Name=Cc01_g04130 | |
| 4959 chr1 manual_curation mRNA 11083890 11088235 . + . ID=GSCOCT00039283001;Parent=GSCOCG00039283001;Name=Cc01_g04130 | |
| 4960 chr1 manual_curation polypeptide 11084238 11087636 . + . ID=GSCOCP00039283001;Dbxref=GENE3D:G3DSA:3.40.5.10,InterPro:IPR000244,InterPro:IPR009027,InterPro:IPR020069,InterPro:IPR020070,PANTHER:PTHR21368,PFAM:PF01281,PFAM:PF03948,SUPERFAMILY:SSF55653,SUPERFAMILY:SSF55658,TAIR:AT5G53070.1,TrEMBL:C6T7I7,TrEMBL:E0CV64,TrEMBL:I1KEX8;Derives_from=GSCOCT00039283001;Name=Cc01_g04130;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:Ribosomal protein L9/RNase H1,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00039283001~ Ribosomal protein L9/RNase H1~ unknown_gene~ complete;original_location=join(342116..342238%2C342331..342465%2C343771..343881%2C344162..344233%2C345350..345514);owner=coffea | |
| 4961 chr1 manual_curation exon 11083890 11084360 . + . Parent=GSCOCT00039283001 | |
| 4962 chr1 manual_curation exon 11084453 11084587 . + . Parent=GSCOCT00039283001 | |
| 4963 chr1 manual_curation exon 11085893 11086003 . + . Parent=GSCOCT00039283001 | |
| 4964 chr1 manual_curation exon 11086284 11086355 . + . Parent=GSCOCT00039283001 | |
| 4965 chr1 manual_curation exon 11087472 11088235 . + . Parent=GSCOCT00039283001 | |
| 4966 chr1 manual_curation CDS 11084238 11084360 . + 0 Parent=GSCOCT00039283001 | |
| 4967 chr1 manual_curation CDS 11084453 11084587 . + 0 Parent=GSCOCT00039283001 | |
| 4968 chr1 manual_curation CDS 11085893 11086003 . + 0 Parent=GSCOCT00039283001 | |
| 4969 chr1 manual_curation CDS 11086284 11086355 . + 0 Parent=GSCOCT00039283001 | |
| 4970 chr1 manual_curation CDS 11087472 11087636 . + 0 Parent=GSCOCT00039283001 | |
| 4971 chr1 manual_curation gene 11131281 11139904 . + . ID=GSCOCG00039284001;Name=Cc01_g04140 | |
| 4972 chr1 manual_curation mRNA 11131281 11139904 . + . ID=GSCOCT00039284001;Parent=GSCOCG00039284001;Name=Cc01_g04140 | |
| 4973 chr1 manual_curation polypeptide 11131484 11139488 . + . ID=GSCOCP00039284001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR000683,InterPro:IPR004104,InterPro:IPR016040,PFAM:PF01408,PFAM:PF02894,SwissProt:Q04869,TAIR:AT3G20790.1,TrEMBL:A9PIU4,TrEMBL:B9RI76,TrEMBL:F6GUA3;Derives_from=GSCOCT00039284001;Name=Cc01_g04140;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,GO:0016491,GO:0055114,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized protein YMR315W,CC_functional_completeness:complete,CC_gene:YMR315W;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00039284001~ Putative Uncharacterized protein YMR315W~ YMR315W~ complete;original_location=join(389362..389484%2C389839..389979%2C390915..390963%2C391203..391220%2C393030..393145%2C393228..393341%2C393694..393744%2C395016..395104%2C395178..395238%2C395367..395444%2C395584..395694%2C397238..397366);owner=coffea | |
| 4974 chr1 manual_curation exon 11131281 11131606 . + . Parent=GSCOCT00039284001 | |
| 4975 chr1 manual_curation exon 11131961 11132101 . + . Parent=GSCOCT00039284001 | |
| 4976 chr1 manual_curation exon 11133037 11133085 . + . Parent=GSCOCT00039284001 | |
| 4977 chr1 manual_curation exon 11133325 11133342 . + . Parent=GSCOCT00039284001 | |
| 4978 chr1 manual_curation exon 11135152 11135267 . + . Parent=GSCOCT00039284001 | |
| 4979 chr1 manual_curation exon 11135350 11135463 . + . Parent=GSCOCT00039284001 | |
| 4980 chr1 manual_curation exon 11135816 11135866 . + . Parent=GSCOCT00039284001 | |
| 4981 chr1 manual_curation exon 11137138 11137226 . + . Parent=GSCOCT00039284001 | |
| 4982 chr1 manual_curation exon 11137300 11137360 . + . Parent=GSCOCT00039284001 | |
| 4983 chr1 manual_curation exon 11137489 11137566 . + . Parent=GSCOCT00039284001 | |
| 4984 chr1 manual_curation exon 11137706 11137816 . + . Parent=GSCOCT00039284001 | |
| 4985 chr1 manual_curation exon 11139360 11139904 . + . Parent=GSCOCT00039284001 | |
| 4986 chr1 manual_curation CDS 11131484 11131606 . + 0 Parent=GSCOCT00039284001 | |
| 4987 chr1 manual_curation CDS 11131961 11132101 . + 0 Parent=GSCOCT00039284001 | |
| 4988 chr1 manual_curation CDS 11133037 11133085 . + 0 Parent=GSCOCT00039284001 | |
| 4989 chr1 manual_curation CDS 11133325 11133342 . + 1 Parent=GSCOCT00039284001 | |
| 4990 chr1 manual_curation CDS 11135152 11135267 . + 1 Parent=GSCOCT00039284001 | |
| 4991 chr1 manual_curation CDS 11135350 11135463 . + 0 Parent=GSCOCT00039284001 | |
| 4992 chr1 manual_curation CDS 11135816 11135866 . + 0 Parent=GSCOCT00039284001 | |
| 4993 chr1 manual_curation CDS 11137138 11137226 . + 0 Parent=GSCOCT00039284001 | |
| 4994 chr1 manual_curation CDS 11137300 11137360 . + 2 Parent=GSCOCT00039284001 | |
| 4995 chr1 manual_curation CDS 11137489 11137566 . + 0 Parent=GSCOCT00039284001 | |
| 4996 chr1 manual_curation CDS 11137706 11137816 . + 0 Parent=GSCOCT00039284001 | |
| 4997 chr1 manual_curation CDS 11139360 11139488 . + 0 Parent=GSCOCT00039284001 | |
| 4998 chr1 manual_curation gene 11150640 11154236 . + . ID=GSCOCG00039285001;Name=Cc01_g04150 | |
| 4999 chr1 manual_curation mRNA 11150640 11154236 . + . ID=GSCOCT00039285001;Parent=GSCOCG00039285001;Name=Cc01_g04150 | |
| 5000 chr1 manual_curation polypeptide 11151669 11153957 . + . ID=GSCOCP00039285001;Dbxref=InterPro:IPR000008,InterPro:IPR008973,InterPro:IPR013583,InterPro:IPR018029,PFAM:PF00168,PFAM:PF08372,PROFILE:PS50004,SMART:SM00239,SUPERFAMILY:SSF49562,SwissProt:Q6DN14,SwissProt:Q9ZVT9,TAIR:AT1G51570.1,TAIR:AT3G57880.1,TAIR:AT5G12970.1,TrEMBL:B9RI77,TrEMBL:F6HLL1,TrEMBL:Q9M2R0;Derives_from=GSCOCT00039285001;Name=Cc01_g04150;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein,CC_functional_completeness:complete,CC_gene:MCTP1,CC_gene:At1g03370;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00039285001~ Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein~ MCTP1~ complete;original_location=409547..411835;owner=coffea | |
| 5001 chr1 manual_curation exon 11150640 11150787 . + . Parent=GSCOCT00039285001 | |
| 5002 chr1 manual_curation exon 11151119 11154236 . + . Parent=GSCOCT00039285001 | |
| 5003 chr1 manual_curation CDS 11151669 11153957 . + 0 Parent=GSCOCT00039285001 | |
| 5004 chr1 manual_curation gene 11192446 11200394 . + . ID=GSCOCG00039286001;Name=Cc01_g04160 | |
| 5005 chr1 manual_curation mRNA 11192446 11200394 . + . ID=GSCOCT00039286001;Parent=GSCOCG00039286001;Name=Cc01_g04160 | |
| 5006 chr1 manual_curation polypeptide 11192446 11200394 . + . ID=GSCOCP00039286001;Dbxref=GENE3D:G3DSA:2.40.180.10,InterPro:IPR000873,InterPro:IPR006076,InterPro:IPR006162,InterPro:IPR006163,InterPro:IPR009081,InterPro:IPR011004,InterPro:IPR011614,InterPro:IPR018028,InterPro:IPR020835,InterPro:IPR020845,PFAM:PF00199,PFAM:PF00501,PFAM:PF00550,PFAM:PF01266,PROFILE:PS50075,PROFILE:PS51402,PROSITE:PS00012,PROSITE:PS00455,SUPERFAMILY:SSF47336,SUPERFAMILY:SSF51161,SUPERFAMILY:SSF56634,SwissProt:B2HIM0,SwissProt:B2HIN2,SwissProt:P96290,TAIR:AT1G20480.1,TAIR:AT3G21230.1,TAIR:AT4G05160.1,TrEMBL:A5B1G8,TrEMBL:B9RI78,TrEMBL:F6GUA1;Derives_from=GSCOCT00039286001;Name=Cc01_g04160;Ontology_term=CC_evidence_code:ISS,GO:0000036,GO:0003824,GO:0004096,GO:0006979,GO:0008152,GO:0016491,GO:0016740,GO:0031177,GO:0048037,GO:0055114,CC_EC_number:6.2.1.3,CC_EC_number:6.2.1.3,CC_EC_number:6.2.1.3,PRODUCT:Putative Long-chain-fatty-acid--AMP ligase FadD28,CC_functional_completeness:modules,CC_gene:fadD28,CC_gene:fadD26;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00039286001~ Putative Long-chain-fatty-acid--AMP ligase FadD28~ fadD28~ modules;original_location=join(450324..450525%2C450606..450808%2C450903..451350%2C451433..451792%2C451870..452048%2C452156..455095%2C455681..458272);owner=coffea | |
| 5007 chr1 manual_curation exon 11192446 11192647 . + . Parent=GSCOCT00039286001 | |
| 5008 chr1 manual_curation exon 11192728 11192930 . + . Parent=GSCOCT00039286001 | |
| 5009 chr1 manual_curation exon 11193025 11193472 . + . Parent=GSCOCT00039286001 | |
| 5010 chr1 manual_curation exon 11193555 11193914 . + . Parent=GSCOCT00039286001 | |
| 5011 chr1 manual_curation exon 11193992 11194170 . + . Parent=GSCOCT00039286001 | |
| 5012 chr1 manual_curation exon 11194278 11197217 . + . Parent=GSCOCT00039286001 | |
| 5013 chr1 manual_curation exon 11197803 11200394 . + . Parent=GSCOCT00039286001 | |
| 5014 chr1 manual_curation CDS 11192446 11192647 . + 0 Parent=GSCOCT00039286001 | |
| 5015 chr1 manual_curation CDS 11192728 11192930 . + 1 Parent=GSCOCT00039286001 | |
| 5016 chr1 manual_curation CDS 11193025 11193472 . + 0 Parent=GSCOCT00039286001 | |
| 5017 chr1 manual_curation CDS 11193555 11193914 . + 1 Parent=GSCOCT00039286001 | |
| 5018 chr1 manual_curation CDS 11193992 11194170 . + 1 Parent=GSCOCT00039286001 | |
| 5019 chr1 manual_curation CDS 11194278 11197217 . + 0 Parent=GSCOCT00039286001 | |
| 5020 chr1 manual_curation CDS 11197803 11200394 . + 0 Parent=GSCOCT00039286001 | |
| 5021 chr1 manual_curation gene 11234930 11236938 . - . ID=GSCOCG00039287001;Name=Cc01_g04170 | |
| 5022 chr1 manual_curation mRNA 11234930 11236938 . - . ID=GSCOCT00039287001;Parent=GSCOCG00039287001;Name=Cc01_g04170 | |
| 5023 chr1 manual_curation polypeptide 11234930 11236938 . - . ID=GSCOCP00039287001;Dbxref=InterPro:IPR012862,PFAM:PF07795,TAIR:AT2G28690.1,TAIR:AT5G22930.1,TAIR:AT5G59760.1,TrEMBL:A5ARE7,TrEMBL:B9SYP8,TrEMBL:F6GTU2;Derives_from=GSCOCT00039287001;Name=Cc01_g04170;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of unknown function (DUF1635),CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00039287001~ Putative Protein of unknown function (DUF1635)~ unknown_gene~ modules;original_location=complement(join(494781..494816%2C492808..493716));owner=coffea | |
| 5024 chr1 manual_curation exon 11234930 11235838 . - . Parent=GSCOCT00039287001 | |
| 5025 chr1 manual_curation exon 11236903 11236938 . - . Parent=GSCOCT00039287001 | |
| 5026 chr1 manual_curation CDS 11234930 11235838 . - 0 Parent=GSCOCT00039287001 | |
| 5027 chr1 manual_curation CDS 11236903 11236938 . - 0 Parent=GSCOCT00039287001 | |
| 5028 chr1 manual_curation gene 11301657 11302513 . + . ID=GSCOCG00039291001;Name=Cc01_g04180 | |
| 5029 chr1 manual_curation mRNA 11301657 11302513 . + . ID=GSCOCT00039291001;Parent=GSCOCG00039291001;Name=Cc01_g04180 | |
| 5030 chr1 manual_curation polypeptide 11301657 11302513 . + . ID=GSCOCP00039291001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00463,SUPERFAMILY:SSF48264,SwissProt:O65790,SwissProt:P93147,SwissProt:Q9FG65,TAIR:AT3G28740.1,TAIR:AT4G37320.1,TAIR:AT5G36220.1,TrEMBL:B9R747,TrEMBL:I1IH38,TrEMBL:I1L133;Derives_from=GSCOCT00039291001;Name=Cc01_g04180;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.89,PRODUCT:Putative Cytochrome P450,CC_functional_completeness:complete,CC_gene:CYP81D1,CC_gene:CYP81E1,CC_gene:CYP81F1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00039291001~ Putative Cytochrome P450~ CYP81D1~ complete;original_location=join(559535..559717%2C559803..559947%2C560333..560391);owner=coffea | |
| 5031 chr1 manual_curation exon 11301657 11301839 . + . Parent=GSCOCT00039291001 | |
| 5032 chr1 manual_curation exon 11301925 11302069 . + . Parent=GSCOCT00039291001 | |
| 5033 chr1 manual_curation exon 11302455 11302513 . + . Parent=GSCOCT00039291001 | |
| 5034 chr1 manual_curation CDS 11301657 11301839 . + 0 Parent=GSCOCT00039291001 | |
| 5035 chr1 manual_curation CDS 11301925 11302069 . + 0 Parent=GSCOCT00039291001 | |
| 5036 chr1 manual_curation CDS 11302455 11302513 . + 1 Parent=GSCOCT00039291001 | |
| 5037 chr1 manual_curation gene 11312190 11315861 . - . ID=GSCOCG00039292001;Name=Cc01_g04190 | |
| 5038 chr1 manual_curation mRNA 11312190 11315861 . - . ID=GSCOCT00039292001;Parent=GSCOCG00039292001;Name=Cc01_g04190 | |
| 5039 chr1 manual_curation polypeptide 11312190 11315861 . - . ID=GSCOCP00039292001;Dbxref=SwissProt:P30986,SwissProt:P93479,SwissProt:Q9SVG4,TAIR:AT1G26380.1,TAIR:AT1G26410.1,TAIR:AT1G26420.1,TrEMBL:A5BZS5,TrEMBL:B9GH04,TrEMBL:F6HM01;Derives_from=GSCOCT00039292001;Name=Cc01_g04190;Ontology_term=CC_evidence_code:ISS,CC_EC_number:1.21.3.3,PRODUCT:Putative Reticuline oxidase-like protein,CC_functional_completeness:fragment,CC_gene:At4g20830,CC_gene:BBE1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00039292001~ Putative Reticuline oxidase-like protein~ At4g20830~ fragment;original_location=complement(join(573659..573739%2C570068..570619));owner=coffea | |
| 5040 chr1 manual_curation exon 11312190 11312741 . - . Parent=GSCOCT00039292001 | |
| 5041 chr1 manual_curation exon 11315781 11315861 . - . Parent=GSCOCT00039292001 | |
| 5042 chr1 manual_curation CDS 11312190 11312741 . - 0 Parent=GSCOCT00039292001 | |
| 5043 chr1 manual_curation CDS 11315781 11315861 . - 0 Parent=GSCOCT00039292001 | |
| 5044 chr1 manual_curation gene 11319528 11323012 . + . ID=GSCOCG00039293001;Name=Cc01_g04200 | |
| 5045 chr1 manual_curation mRNA 11319528 11323012 . + . ID=GSCOCT00039293001;Parent=GSCOCG00039293001;Name=Cc01_g04200 | |
| 5046 chr1 manual_curation polypeptide 11319857 11322475 . + . ID=GSCOCP00039293001;Dbxref=InterPro:IPR006957,PFAM:PF04873,SwissProt:O23116,SwissProt:O24606,SwissProt:Q9SLH0,TAIR:AT1G73730.1,TAIR:AT2G27050.1,TAIR:AT3G20770.1,TrEMBL:B7T1N3,TrEMBL:B9GMA1,TrEMBL:B9RI80;Derives_from=GSCOCT00039293001;Name=Cc01_g04200;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0030528,CC_EC_number:missing_EC_number,PRODUCT:EIN3-like protein EIL3,CC_functional_completeness:complete,CC_gene:EIL3,CC_gene:EIN3,CC_gene:EIL1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00039293001~ EIN3-like protein EIL3~ EIL3~ complete;original_location=join(577735..577760%2C578231..580131%2C580196..580222%2C580316..580353);owner=coffea | |
| 5047 chr1 manual_curation exon 11319528 11319882 . + . Parent=GSCOCT00039293001 | |
| 5048 chr1 manual_curation exon 11320353 11322253 . + . Parent=GSCOCT00039293001 | |
| 5049 chr1 manual_curation exon 11322318 11322344 . + . Parent=GSCOCT00039293001 | |
| 5050 chr1 manual_curation exon 11322438 11323012 . + . Parent=GSCOCT00039293001 | |
| 5051 chr1 manual_curation CDS 11319857 11319882 . + 0 Parent=GSCOCT00039293001 | |
| 5052 chr1 manual_curation CDS 11320353 11322253 . + 2 Parent=GSCOCT00039293001 | |
| 5053 chr1 manual_curation CDS 11322318 11322344 . + 1 Parent=GSCOCT00039293001 | |
| 5054 chr1 manual_curation CDS 11322438 11322475 . + 1 Parent=GSCOCT00039293001 | |
| 5055 chr1 manual_curation gene 11404224 11407056 . + . ID=GSCOCG00039295001;Name=Cc01_g04210 | |
| 5056 chr1 manual_curation mRNA 11404224 11407056 . + . ID=GSCOCT00039295001;Parent=GSCOCG00039295001;Name=Cc01_g04210 | |
| 5057 chr1 manual_curation polypeptide 11405982 11407056 . + . ID=GSCOCP00039295001;Dbxref=InterPro:IPR002913,PFAM:PF01852,SwissProt:A2WLR5,SwissProt:Q39123,SwissProt:Q9ZU11,TAIR:AT1G52150.2,TAIR:AT4G32880.1,TrEMBL:A8VI06,TrEMBL:I0B558,TrEMBL:Q5D1L9;Derives_from=GSCOCT00039295001;Name=Cc01_g04210;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Homeobox-leucine zipper protein ATHB-8,CC_functional_completeness:fragment,CC_gene:ATHB-8,CC_gene:ATHB-15,CC_gene:HOX29;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00039295001~ Putative Homeobox-leucine zipper protein ATHB-8~ ATHB-8~ fragment;original_location=join(663860..663865%2C663956..664039%2C664129..664191%2C664359..664433%2C664544..664590%2C664796..664934);owner=coffea | |
| 5058 chr1 manual_curation exon 11404224 11404811 . + . Parent=GSCOCT00039295001 | |
| 5059 chr1 manual_curation exon 11404938 11405155 . + . Parent=GSCOCT00039295001 | |
| 5060 chr1 manual_curation exon 11405691 11405987 . + . Parent=GSCOCT00039295001 | |
| 5061 chr1 manual_curation exon 11406078 11406161 . + . Parent=GSCOCT00039295001 | |
| 5062 chr1 manual_curation exon 11406251 11406313 . + . Parent=GSCOCT00039295001 | |
| 5063 chr1 manual_curation exon 11406481 11406555 . + . Parent=GSCOCT00039295001 | |
| 5064 chr1 manual_curation exon 11406666 11406712 . + . Parent=GSCOCT00039295001 | |
| 5065 chr1 manual_curation exon 11406918 11407056 . + . Parent=GSCOCT00039295001 | |
| 5066 chr1 manual_curation CDS 11405982 11405987 . + 0 Parent=GSCOCT00039295001 | |
| 5067 chr1 manual_curation CDS 11406078 11406161 . + 0 Parent=GSCOCT00039295001 | |
| 5068 chr1 manual_curation CDS 11406251 11406313 . + 0 Parent=GSCOCT00039295001 | |
| 5069 chr1 manual_curation CDS 11406481 11406555 . + 0 Parent=GSCOCT00039295001 | |
| 5070 chr1 manual_curation CDS 11406666 11406712 . + 0 Parent=GSCOCT00039295001 | |
| 5071 chr1 manual_curation CDS 11406918 11407056 . + 2 Parent=GSCOCT00039295001 | |
| 5072 chr1 manual_curation gene 11415062 11415498 . + . ID=GSCOCG00039297001;Name=Cc01_g04220 | |
| 5073 chr1 manual_curation mRNA 11415062 11415498 . + . ID=GSCOCT00039297001;Parent=GSCOCG00039297001;Name=Cc01_g04220 | |
| 5074 chr1 manual_curation polypeptide 11415062 11415498 . + . ID=GSCOCP00039297001;Dbxref=SwissProt:Q944A7,SwissProt:Q9FHD7,TAIR:AT3G54030.1,TAIR:AT4G00710.1,TAIR:AT5G59010.1,TrEMBL:B9S387,TrEMBL:D7SK53,TrEMBL:D7THE2;Derives_from=GSCOCT00039297001;Name=Cc01_g04220;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable serine/threonine-protein kinase At5g41260,CC_functional_completeness:fragment,CC_gene:At5g41260,CC_gene:At4g35230;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00039297001~ Putative Probable serine/threonine-protein kinase At5g41260~ At5g41260~ fragment;original_location=join(672940..673021%2C673102..673376);owner=coffea | |
| 5075 chr1 manual_curation exon 11415062 11415143 . + . Parent=GSCOCT00039297001 | |
| 5076 chr1 manual_curation exon 11415224 11415498 . + . Parent=GSCOCT00039297001 | |
| 5077 chr1 manual_curation CDS 11415062 11415143 . + 0 Parent=GSCOCT00039297001 | |
| 5078 chr1 manual_curation CDS 11415224 11415498 . + 1 Parent=GSCOCT00039297001 | |
| 5079 chr1 manual_curation gene 11426550 11427148 . + . ID=GSCOCG00039299001;Name=Cc01_g04230 | |
| 5080 chr1 manual_curation mRNA 11426550 11427148 . + . ID=GSCOCT00039299001;Parent=GSCOCG00039299001;Name=Cc01_g04230 | |
| 5081 chr1 manual_curation polypeptide 11426550 11427148 . + . ID=GSCOCP00039299001;Dbxref=InterPro:IPR000577,PANTHER:PTHR10196,SwissProt:O75191,SwissProt:Q3MIF4,SwissProt:Q5R830,TAIR:AT5G49650.1,TrEMBL:A5AYY4,TrEMBL:E0CNV3,TrEMBL:Q8GRU7;Derives_from=GSCOCT00039299001;Name=Cc01_g04230;Ontology_term=CC_evidence_code:ISS,GO:0005975,CC_EC_number:missing_EC_number,PRODUCT:xylulose kinase-2,CC_functional_completeness:fragment,CC_gene:XYLB,CC_gene:Xylb;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00039299001~ xylulose kinase-2~ XYLB~ fragment;original_location=join(684428..684454%2C684759..684879%2C684950..685026);owner=coffea | |
| 5082 chr1 manual_curation exon 11426550 11426576 . + . Parent=GSCOCT00039299001 | |
| 5083 chr1 manual_curation exon 11426881 11427001 . + . Parent=GSCOCT00039299001 | |
| 5084 chr1 manual_curation exon 11427072 11427148 . + . Parent=GSCOCT00039299001 | |
| 5085 chr1 manual_curation CDS 11426550 11426576 . + 0 Parent=GSCOCT00039299001 | |
| 5086 chr1 manual_curation CDS 11426881 11427001 . + 0 Parent=GSCOCT00039299001 | |
| 5087 chr1 manual_curation CDS 11427072 11427148 . + 1 Parent=GSCOCT00039299001 | |
| 5088 chr1 manual_curation gene 11431052 11432335 . + . ID=GSCOCG00039301001;Name=Cc01_g04240 | |
| 5089 chr1 manual_curation mRNA 11431052 11432335 . + . ID=GSCOCT00039301001;Parent=GSCOCG00039301001;Name=Cc01_g04240 | |
| 5090 chr1 manual_curation polypeptide 11431052 11432335 . + . ID=GSCOCP00039301001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,SwissProt:Q8W491,SwissProt:Q9LXV0,SwissProt:Q9ZQG4,TAIR:AT2G15480.1,TAIR:AT4G34131.1,TAIR:AT5G12890.1,TrEMBL:B9GM96,TrEMBL:B9RI83,TrEMBL:F6GU94;Derives_from=GSCOCT00039301001;Name=Cc01_g04240;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:UDP-glycosyltransferase 92A1,CC_functional_completeness:complete,CC_gene:UGT92A1,CC_gene:UGT73B5,CC_gene:UGT73B3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00039301001~ UDP-glycosyltransferase 92A1~ UGT92A1~ complete;original_location=688930..690213;owner=coffea | |
| 5091 chr1 manual_curation exon 11431052 11432335 . + . Parent=GSCOCT00039301001 | |
| 5092 chr1 manual_curation CDS 11431052 11432335 . + 0 Parent=GSCOCT00039301001 | |
| 5093 chr1 manual_curation gene 11434703 11437088 . - . ID=GSCOCG00039303001;Name=Cc01_g04250 | |
| 5094 chr1 manual_curation mRNA 11434703 11437088 . - . ID=GSCOCT00039303001;Parent=GSCOCG00039303001;Name=Cc01_g04250 | |
| 5095 chr1 manual_curation polypeptide 11434703 11437088 . - . ID=GSCOCP00039303001;Dbxref=InterPro:IPR008512,PFAM:PF05634,SwissProt:Q8W4A5,SwissProt:Q9FH50,SwissProt:Q9XIR4,TAIR:AT1G64810.2,TAIR:AT5G57930.2,TAIR:AT5G61930.1,TrEMBL:B9RX46,TrEMBL:D7SQI0,TrEMBL:I1L9Q1;Derives_from=GSCOCT00039303001;Name=Cc01_g04250;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative APO protein 3%2C mitochondrial,CC_functional_completeness:complete,CC_gene:APO3,CC_gene:APO1,CC_gene:APO2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00039303001~ Putative APO protein 3%2C mitochondrial~ APO3~ complete;original_location=complement(join(694614..694966%2C693263..693693%2C692581..692987));owner=coffea | |
| 5096 chr1 manual_curation exon 11434703 11435109 . - . Parent=GSCOCT00039303001 | |
| 5097 chr1 manual_curation exon 11435385 11435815 . - . Parent=GSCOCT00039303001 | |
| 5098 chr1 manual_curation exon 11436736 11437088 . - . Parent=GSCOCT00039303001 | |
| 5099 chr1 manual_curation CDS 11434703 11435109 . - 1 Parent=GSCOCT00039303001 | |
| 5100 chr1 manual_curation CDS 11435385 11435815 . - 2 Parent=GSCOCT00039303001 | |
| 5101 chr1 manual_curation CDS 11436736 11437088 . - 0 Parent=GSCOCT00039303001 | |
| 5102 chr1 manual_curation gene 11468277 11474632 . - . ID=GSCOCG00039305001;Name=Cc01_g04260 | |
| 5103 chr1 manual_curation mRNA 11468277 11474632 . - . ID=GSCOCT00039305001;Parent=GSCOCG00039305001;Name=Cc01_g04260 | |
| 5104 chr1 manual_curation polypeptide 11468277 11474497 . - . ID=GSCOCP00039305001;Dbxref=InterPro:IPR003347,InterPro:IPR022777,PFAM:PF08007,PROFILE:PS51184,SMART:SM00558,SwissProt:Q497B8,SwissProt:Q8N371,SwissProt:Q9CXT6,TAIR:AT3G20810.2,TAIR:AT5G19840.2,TrEMBL:F6GU98,TrEMBL:G1FE06,TrEMBL:Q9LT40;Derives_from=GSCOCT00039305001;Name=Cc01_g04260;Ontology_term=CC_evidence_code:ISS,CC_EC_number:1.14.11.16,PRODUCT:Putative Lysine-specific demethylase 8,CC_functional_completeness:complete,CC_gene:Kdm8,CC_gene:KDM8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00039305001~ Putative Lysine-specific demethylase 8~ Kdm8~ complete;original_location=complement(join(731866..732375%2C730076..730285%2C728789..728923%2C728562..728705%2C726844..726936%2C726155..726343));owner=coffea | |
| 5105 chr1 manual_curation exon 11468277 11468465 . - . Parent=GSCOCT00039305001 | |
| 5106 chr1 manual_curation exon 11468966 11469058 . - . Parent=GSCOCT00039305001 | |
| 5107 chr1 manual_curation exon 11470684 11470827 . - . Parent=GSCOCT00039305001 | |
| 5108 chr1 manual_curation exon 11470911 11471045 . - . Parent=GSCOCT00039305001 | |
| 5109 chr1 manual_curation exon 11472198 11472407 . - . Parent=GSCOCT00039305001 | |
| 5110 chr1 manual_curation exon 11473988 11474632 . - . Parent=GSCOCT00039305001 | |
| 5111 chr1 manual_curation CDS 11468277 11468465 . - 0 Parent=GSCOCT00039305001 | |
| 5112 chr1 manual_curation CDS 11468966 11469058 . - 0 Parent=GSCOCT00039305001 | |
| 5113 chr1 manual_curation CDS 11470684 11470827 . - 0 Parent=GSCOCT00039305001 | |
| 5114 chr1 manual_curation CDS 11470911 11471045 . - 0 Parent=GSCOCT00039305001 | |
| 5115 chr1 manual_curation CDS 11472198 11472407 . - 0 Parent=GSCOCT00039305001 | |
| 5116 chr1 manual_curation CDS 11473988 11474497 . - 0 Parent=GSCOCT00039305001 | |
| 5117 chr1 manual_curation gene 11481545 11482455 . + . ID=GSCOCG00039306001;Name=Cc01_g04270 | |
| 5118 chr1 manual_curation mRNA 11481545 11482455 . + . ID=GSCOCT00039306001;Parent=GSCOCG00039306001;Name=Cc01_g04270 | |
| 5119 chr1 manual_curation polypeptide 11481545 11482139 . + . ID=GSCOCP00039306001;Derives_from=GSCOCT00039306001;Name=Cc01_g04270;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00039306001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(739423..739658%2C739912..740017);owner=coffea | |
| 5120 chr1 manual_curation exon 11481545 11481780 . + . Parent=GSCOCT00039306001 | |
| 5121 chr1 manual_curation exon 11482034 11482455 . + . Parent=GSCOCT00039306001 | |
| 5122 chr1 manual_curation CDS 11481545 11481780 . + 0 Parent=GSCOCT00039306001 | |
| 5123 chr1 manual_curation CDS 11482034 11482139 . + 2 Parent=GSCOCT00039306001 | |
| 5124 chr1 manual_curation gene 11501708 11510202 . + . ID=GSCOCG00039310001;Name=Cc01_g04280 | |
| 5125 chr1 manual_curation mRNA 11501708 11510202 . + . ID=GSCOCT00039310001;Parent=GSCOCG00039310001;Name=Cc01_g04280 | |
| 5126 chr1 manual_curation polypeptide 11501708 11510202 . + . ID=GSCOCP00039310001;Dbxref=InterPro:IPR005202,PFAM:PF03514,PROFILE:PS50985,SwissProt:P0C883,SwissProt:Q3EDH0,SwissProt:Q9XE58,TAIR:AT1G07520.1,TAIR:AT1G07530.1,TAIR:AT2G29060.1,TrEMBL:B9HPF7,TrEMBL:B9T684,TrEMBL:D7KH33;Derives_from=GSCOCT00039310001;Name=Cc01_g04280;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Scarecrow-like protein 14,CC_functional_completeness:complete,CC_gene:SCL14,CC_gene:SCL33,CC_gene:SCL31;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00039310001~ Putative Scarecrow-like protein 14~ SCL14~ complete;original_location=join(759586..759859%2C759908..761542%2C762488..762601%2C764915..764988%2C765957..766358%2C766419..766610%2C766689..768080);owner=coffea | |
| 5127 chr1 manual_curation exon 11501708 11501981 . + . Parent=GSCOCT00039310001 | |
| 5128 chr1 manual_curation exon 11502030 11503664 . + . Parent=GSCOCT00039310001 | |
| 5129 chr1 manual_curation exon 11504610 11504723 . + . Parent=GSCOCT00039310001 | |
| 5130 chr1 manual_curation exon 11507037 11507110 . + . Parent=GSCOCT00039310001 | |
| 5131 chr1 manual_curation exon 11508079 11508480 . + . Parent=GSCOCT00039310001 | |
| 5132 chr1 manual_curation exon 11508541 11508732 . + . Parent=GSCOCT00039310001 | |
| 5133 chr1 manual_curation exon 11508811 11510202 . + . Parent=GSCOCT00039310001 | |
| 5134 chr1 manual_curation CDS 11501708 11501981 . + 0 Parent=GSCOCT00039310001 | |
| 5135 chr1 manual_curation CDS 11502030 11503664 . + 1 Parent=GSCOCT00039310001 | |
| 5136 chr1 manual_curation CDS 11504610 11504723 . + 1 Parent=GSCOCT00039310001 | |
| 5137 chr1 manual_curation CDS 11507037 11507110 . + 1 Parent=GSCOCT00039310001 | |
| 5138 chr1 manual_curation CDS 11508079 11508480 . + 0 Parent=GSCOCT00039310001 | |
| 5139 chr1 manual_curation CDS 11508541 11508732 . + 0 Parent=GSCOCT00039310001 | |
| 5140 chr1 manual_curation CDS 11508811 11510202 . + 0 Parent=GSCOCT00039310001 | |
| 5141 chr1 manual_curation gene 11524000 11527972 . + . ID=GSCOCG00039312001;Name=Cc01_g04290 | |
| 5142 chr1 manual_curation mRNA 11524000 11527972 . + . ID=GSCOCT00039312001;Parent=GSCOCG00039312001;Name=Cc01_g04290 | |
| 5143 chr1 manual_curation polypeptide 11524223 11526889 . + . ID=GSCOCP00039312001;Dbxref=InterPro:IPR005202,PFAM:PF03514,PROFILE:PS50985,SwissProt:P0C883,SwissProt:Q3EDH0,SwissProt:Q9XE58,TAIR:AT1G07520.1,TAIR:AT1G07530.1,TAIR:AT2G29060.1,TrEMBL:B9HPF7,TrEMBL:B9HPF8,TrEMBL:B9T683;Derives_from=GSCOCT00039312001;Name=Cc01_g04290;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Scarecrow-like protein 14,CC_functional_completeness:complete,CC_gene:SCL14,CC_gene:SCL33,CC_gene:SCL31;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00039312001~ Putative Scarecrow-like protein 14~ SCL14~ complete;original_location=join(782101..782113%2C782513..783863%2C783954..784767);owner=coffea | |
| 5144 chr1 manual_curation exon 11524000 11524235 . + . Parent=GSCOCT00039312001 | |
| 5145 chr1 manual_curation exon 11524635 11525985 . + . Parent=GSCOCT00039312001 | |
| 5146 chr1 manual_curation exon 11526076 11527972 . + . Parent=GSCOCT00039312001 | |
| 5147 chr1 manual_curation CDS 11524223 11524235 . + 0 Parent=GSCOCT00039312001 | |
| 5148 chr1 manual_curation CDS 11524635 11525985 . + 1 Parent=GSCOCT00039312001 | |
| 5149 chr1 manual_curation CDS 11526076 11526889 . + 2 Parent=GSCOCT00039312001 | |
| 5150 chr1 manual_curation gene 11545089 11595233 . + . ID=GSCOCG00039314001;Name=Cc01_g04300 | |
| 5151 chr1 manual_curation mRNA 11545089 11595233 . + . ID=GSCOCT00039314001;Parent=GSCOCG00039314001;Name=Cc01_g04300 | |
| 5152 chr1 manual_curation polypeptide 11545456 11595233 . + . ID=GSCOCP00039314001;Dbxref=InterPro:IPR005202,PFAM:PF03514,PROFILE:PS50985,SwissProt:P0C883,SwissProt:Q9SNB8,SwissProt:Q9XE58,TAIR:AT1G07530.1,TAIR:AT2G29060.1,TAIR:AT3G46600.1,TrEMBL:B9T680,TrEMBL:I1LQP2,TrEMBL:Q1PCS0;Derives_from=GSCOCT00039314001;Name=Cc01_g04300;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Scarecrow-like protein 30,CC_functional_completeness:complete,CC_gene:SCL14,CC_gene:SCL30,CC_gene:SCL33;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00039314001~ Putative Scarecrow-like protein 30~ SCL14~ complete;original_location=join(803334..803583%2C803922..805342%2C853046..853111);owner=coffea | |
| 5153 chr1 manual_curation exon 11545089 11545705 . + . Parent=GSCOCT00039314001 | |
| 5154 chr1 manual_curation exon 11546044 11547464 . + . Parent=GSCOCT00039314001 | |
| 5155 chr1 manual_curation exon 11595168 11595233 . + . Parent=GSCOCT00039314001 | |
| 5156 chr1 manual_curation CDS 11545456 11545705 . + 0 Parent=GSCOCT00039314001 | |
| 5157 chr1 manual_curation CDS 11546044 11547464 . + 1 Parent=GSCOCT00039314001 | |
| 5158 chr1 manual_curation CDS 11595168 11595233 . + 0 Parent=GSCOCT00039314001 | |
| 5159 chr1 manual_curation gene 11640158 11642314 . + . ID=GSCOCG00039317001;Name=Cc01_g04310 | |
| 5160 chr1 manual_curation mRNA 11640158 11642314 . + . ID=GSCOCT00039317001;Parent=GSCOCG00039317001;Name=Cc01_g04310 | |
| 5161 chr1 manual_curation polypeptide 11640158 11642314 . + . ID=GSCOCP00039317001;Dbxref=InterPro:IPR005202,PFAM:PF03514,PROFILE:PS50985,SwissProt:O80933,SwissProt:P0C883,SwissProt:Q9XE58,TAIR:AT1G07530.1,TAIR:AT2G29060.1,TAIR:AT2G37650.1,TrEMBL:B9GJL6,TrEMBL:F6GV00,TrEMBL:Q00LP5;Derives_from=GSCOCT00039317001;Name=Cc01_g04310;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Scarecrow-like protein 33,CC_functional_completeness:fragment,CC_gene:SCL14,CC_gene:SCL9,CC_gene:SCL33;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00039317001~ Scarecrow-like protein 33~ SCL14~ fragment;original_location=join(898036..898418%2C899010..899675%2C899721..900192);owner=coffea | |
| 5162 chr1 manual_curation exon 11640158 11640540 . + . Parent=GSCOCT00039317001 | |
| 5163 chr1 manual_curation exon 11641132 11641797 . + . Parent=GSCOCT00039317001 | |
| 5164 chr1 manual_curation exon 11641843 11642314 . + . Parent=GSCOCT00039317001 | |
| 5165 chr1 manual_curation CDS 11640158 11640540 . + 0 Parent=GSCOCT00039317001 | |
| 5166 chr1 manual_curation CDS 11641132 11641797 . + 2 Parent=GSCOCT00039317001 | |
| 5167 chr1 manual_curation CDS 11641843 11642314 . + 2 Parent=GSCOCT00039317001 | |
| 5168 chr1 manual_curation gene 12449999 12453266 . - . ID=GSCOCG00004449001;Name=Cc01_g04320 | |
| 5169 chr1 manual_curation mRNA 12449999 12453266 . - . ID=GSCOCT00004449001;Parent=GSCOCG00004449001;Name=Cc01_g04320 | |
| 5170 chr1 manual_curation polypeptide 12449999 12453189 . - . ID=GSCOCP00004449001;Dbxref=InterPro:IPR008758,PANTHER:PTHR11010,PFAM:PF05577,SwissProt:P42785,SwissProt:Q5RBU7,SwissProt:Q7TMR0,TAIR:AT2G24280.1,TAIR:AT5G22860.1,TAIR:AT5G65760.1,TrEMBL:A5C9W6,TrEMBL:F6GW68,TrEMBL:F6GW70;Derives_from=GSCOCT00004449001;Name=Cc01_g04320;Ontology_term=CC_evidence_code:ISS,GO:0006508,GO:0008236,CC_EC_number:3.4.16.2,PRODUCT:Putative Lysosomal Pro-X carboxypeptidase,CC_functional_completeness:complete,CC_gene:PRCP,CC_gene:Prcp;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004449001~ Putative Lysosomal Pro-X carboxypeptidase~ PRCP~ complete;original_location=complement(join(5592..6008%2C5296..5482%2C5061..5194%2C4848..4960%2C4011..4257%2C3571..3726%2C3362..3441%2C3196..3245%2C2818..2966));owner=coffea | |
| 5171 chr1 manual_curation exon 12449999 12450147 . - . Parent=GSCOCT00004449001 | |
| 5172 chr1 manual_curation exon 12450377 12450426 . - . Parent=GSCOCT00004449001 | |
| 5173 chr1 manual_curation exon 12450543 12450622 . - . Parent=GSCOCT00004449001 | |
| 5174 chr1 manual_curation exon 12450752 12450907 . - . Parent=GSCOCT00004449001 | |
| 5175 chr1 manual_curation exon 12451192 12451438 . - . Parent=GSCOCT00004449001 | |
| 5176 chr1 manual_curation exon 12452029 12452141 . - . Parent=GSCOCT00004449001 | |
| 5177 chr1 manual_curation exon 12452242 12452375 . - . Parent=GSCOCT00004449001 | |
| 5178 chr1 manual_curation exon 12452477 12452663 . - . Parent=GSCOCT00004449001 | |
| 5179 chr1 manual_curation exon 12452773 12453266 . - . Parent=GSCOCT00004449001 | |
| 5180 chr1 manual_curation CDS 12449999 12450147 . - 1 Parent=GSCOCT00004449001 | |
| 5181 chr1 manual_curation CDS 12450377 12450426 . - 2 Parent=GSCOCT00004449001 | |
| 5182 chr1 manual_curation CDS 12450543 12450622 . - 0 Parent=GSCOCT00004449001 | |
| 5183 chr1 manual_curation CDS 12450752 12450907 . - 0 Parent=GSCOCT00004449001 | |
| 5184 chr1 manual_curation CDS 12451192 12451438 . - 2 Parent=GSCOCT00004449001 | |
| 5185 chr1 manual_curation CDS 12452029 12452141 . - 0 Parent=GSCOCT00004449001 | |
| 5186 chr1 manual_curation CDS 12452242 12452375 . - 1 Parent=GSCOCT00004449001 | |
| 5187 chr1 manual_curation CDS 12452477 12452663 . - 0 Parent=GSCOCT00004449001 | |
| 5188 chr1 manual_curation CDS 12452773 12453189 . - 0 Parent=GSCOCT00004449001 | |
| 5189 chr1 manual_curation gene 12637881 12661141 . + . ID=GSCOCG00004454001;Name=Cc01_g04330 | |
| 5190 chr1 manual_curation mRNA 12637881 12661141 . + . ID=GSCOCT00004454001;Parent=GSCOCG00004454001;Name=Cc01_g04330 | |
| 5191 chr1 manual_curation polypeptide 12637989 12660677 . + . ID=GSCOCP00004454001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019782,PROFILE:PS50082,PROFILE:PS50294,SMART:SM00320,SUPERFAMILY:SSF50978,TAIR:AT5G12920.2,TrEMBL:B9RI85,TrEMBL:D7M543,TrEMBL:F4K106;Derives_from=GSCOCT00004454001;Name=Cc01_g04330;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Transducin/WD40 repeat-like superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004454001~ Putative Transducin/WD40 repeat-like superfamily protein~ unknown_gene~ complete;original_location=join(190808..190872%2C190951..191047%2C191153..191206%2C191318..191364%2C191692..191725%2C193747..193819%2C194256..194365%2C196128..196202%2C203619..203710%2C205238..205367%2C205487..205597%2C206067..206135%2C208093..208184%2C209959..210024%2C210156..210222%2C212140..212225%2C212653..212776%2C213428..213496);owner=coffea | |
| 5192 chr1 manual_curation exon 12637881 12638053 . + . Parent=GSCOCT00004454001 | |
| 5193 chr1 manual_curation exon 12638132 12638228 . + . Parent=GSCOCT00004454001 | |
| 5194 chr1 manual_curation exon 12638334 12638387 . + . Parent=GSCOCT00004454001 | |
| 5195 chr1 manual_curation exon 12638499 12638545 . + . Parent=GSCOCT00004454001 | |
| 5196 chr1 manual_curation exon 12638873 12638906 . + . Parent=GSCOCT00004454001 | |
| 5197 chr1 manual_curation exon 12640928 12641000 . + . Parent=GSCOCT00004454001 | |
| 5198 chr1 manual_curation exon 12641437 12641546 . + . Parent=GSCOCT00004454001 | |
| 5199 chr1 manual_curation exon 12643309 12643383 . + . Parent=GSCOCT00004454001 | |
| 5200 chr1 manual_curation exon 12650800 12650891 . + . Parent=GSCOCT00004454001 | |
| 5201 chr1 manual_curation exon 12652419 12652548 . + . Parent=GSCOCT00004454001 | |
| 5202 chr1 manual_curation exon 12652668 12652778 . + . Parent=GSCOCT00004454001 | |
| 5203 chr1 manual_curation exon 12653248 12653316 . + . Parent=GSCOCT00004454001 | |
| 5204 chr1 manual_curation exon 12655274 12655365 . + . Parent=GSCOCT00004454001 | |
| 5205 chr1 manual_curation exon 12657140 12657205 . + . Parent=GSCOCT00004454001 | |
| 5206 chr1 manual_curation exon 12657337 12657403 . + . Parent=GSCOCT00004454001 | |
| 5207 chr1 manual_curation exon 12659321 12659406 . + . Parent=GSCOCT00004454001 | |
| 5208 chr1 manual_curation exon 12659834 12659957 . + . Parent=GSCOCT00004454001 | |
| 5209 chr1 manual_curation exon 12660609 12661141 . + . Parent=GSCOCT00004454001 | |
| 5210 chr1 manual_curation CDS 12637989 12638053 . + 0 Parent=GSCOCT00004454001 | |
| 5211 chr1 manual_curation CDS 12638132 12638228 . + 2 Parent=GSCOCT00004454001 | |
| 5212 chr1 manual_curation CDS 12638334 12638387 . + 0 Parent=GSCOCT00004454001 | |
| 5213 chr1 manual_curation CDS 12638499 12638545 . + 0 Parent=GSCOCT00004454001 | |
| 5214 chr1 manual_curation CDS 12638873 12638906 . + 2 Parent=GSCOCT00004454001 | |
| 5215 chr1 manual_curation CDS 12640928 12641000 . + 0 Parent=GSCOCT00004454001 | |
| 5216 chr1 manual_curation CDS 12641437 12641546 . + 1 Parent=GSCOCT00004454001 | |
| 5217 chr1 manual_curation CDS 12643309 12643383 . + 0 Parent=GSCOCT00004454001 | |
| 5218 chr1 manual_curation CDS 12650800 12650891 . + 0 Parent=GSCOCT00004454001 | |
| 5219 chr1 manual_curation CDS 12652419 12652548 . + 2 Parent=GSCOCT00004454001 | |
| 5220 chr1 manual_curation CDS 12652668 12652778 . + 0 Parent=GSCOCT00004454001 | |
| 5221 chr1 manual_curation CDS 12653248 12653316 . + 0 Parent=GSCOCT00004454001 | |
| 5222 chr1 manual_curation CDS 12655274 12655365 . + 0 Parent=GSCOCT00004454001 | |
| 5223 chr1 manual_curation CDS 12657140 12657205 . + 2 Parent=GSCOCT00004454001 | |
| 5224 chr1 manual_curation CDS 12657337 12657403 . + 2 Parent=GSCOCT00004454001 | |
| 5225 chr1 manual_curation CDS 12659321 12659406 . + 0 Parent=GSCOCT00004454001 | |
| 5226 chr1 manual_curation CDS 12659834 12659957 . + 2 Parent=GSCOCT00004454001 | |
| 5227 chr1 manual_curation CDS 12660609 12660677 . + 0 Parent=GSCOCT00004454001 | |
| 5228 chr1 manual_curation gene 12662015 12664612 . - . ID=GSCOCG00004455001;Name=Cc01_g04340 | |
| 5229 chr1 manual_curation mRNA 12662015 12664612 . - . ID=GSCOCT00004455001;Parent=GSCOCG00004455001;Name=Cc01_g04340 | |
| 5230 chr1 manual_curation polypeptide 12662015 12664612 . - . ID=GSCOCP00004455001;Dbxref=InterPro:IPR005123,PFAM:PF03171,SwissProt:P10967,SwissProt:Q84MB3,SwissProt:Q9C5K7,TAIR:AT1G55290.1,TAIR:AT3G12900.1,TAIR:AT3G13610.1,TrEMBL:A5B7D2,TrEMBL:B9H637,TrEMBL:F6H4S9;Derives_from=GSCOCT00004455001;Name=Cc01_g04340;Ontology_term=CC_evidence_code:ISS,GO:0016491,CC_EC_number:1.14.11.9,PRODUCT:Putative 1-aminocyclopropane-1-carboxylate oxidase homolog 2,CC_functional_completeness:complete,CC_gene:At1g06640,CC_gene:At1g06620,CC_gene:ACO3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004455001~ Putative 1-aminocyclopropane-1-carboxylate oxidase homolog 2~ At1g06640~ complete;original_location=complement(join(216929..217431%2C216347..216692%2C214834..215079));owner=coffea | |
| 5231 chr1 manual_curation exon 12662015 12662260 . - . Parent=GSCOCT00004455001 | |
| 5232 chr1 manual_curation exon 12663528 12663873 . - . Parent=GSCOCT00004455001 | |
| 5233 chr1 manual_curation exon 12664110 12664612 . - . Parent=GSCOCT00004455001 | |
| 5234 chr1 manual_curation CDS 12662015 12662260 . - 0 Parent=GSCOCT00004455001 | |
| 5235 chr1 manual_curation CDS 12663528 12663873 . - 2 Parent=GSCOCT00004455001 | |
| 5236 chr1 manual_curation CDS 12664110 12664612 . - 0 Parent=GSCOCT00004455001 | |
| 5237 chr1 manual_curation gene 13000558 13005102 . + . ID=GSCOCG00004456001;Name=Cc01_g04350 | |
| 5238 chr1 manual_curation mRNA 13000558 13005102 . + . ID=GSCOCT00004456001;Parent=GSCOCG00004456001;Name=Cc01_g04350 | |
| 5239 chr1 manual_curation polypeptide 13000753 13004825 . + . ID=GSCOCP00004456001;Dbxref=InterPro:IPR004883,PFAM:PF03195,PROFILE:PS50891,SwissProt:Q8LBW3,SwissProt:Q9SA51,SwissProt:Q9SHE9,TAIR:AT1G16530.1,TAIR:AT1G31320.1,TAIR:AT2G30130.1,TrEMBL:A5BKW9,TrEMBL:E0CTA1,TrEMBL:I1KU11;Derives_from=GSCOCT00004456001;Name=Cc01_g04350;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:LOB domain-containing protein 4,CC_functional_completeness:complete,CC_gene:LBD4,CC_gene:LBD3,CC_gene:LBD12;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004456001~ LOB domain-containing protein 4~ LBD4~ complete;original_location=join(553572..553748%2C557291..557644);owner=coffea | |
| 5240 chr1 manual_curation exon 13000558 13000929 . + . Parent=GSCOCT00004456001 | |
| 5241 chr1 manual_curation exon 13004472 13005102 . + . Parent=GSCOCT00004456001 | |
| 5242 chr1 manual_curation CDS 13000753 13000929 . + 0 Parent=GSCOCT00004456001 | |
| 5243 chr1 manual_curation CDS 13004472 13004825 . + 0 Parent=GSCOCT00004456001 | |
| 5244 chr1 manual_curation gene 13015619 13016542 . - . ID=GSCOCG00004457001;Name=Cc01_g04360 | |
| 5245 chr1 manual_curation mRNA 13015619 13016542 . - . ID=GSCOCT00004457001;Parent=GSCOCG00004457001;Name=Cc01_g04360 | |
| 5246 chr1 manual_curation polypeptide 13015619 13016542 . - . ID=GSCOCP00004457001;Dbxref=SwissProt:O22160,TAIR:AT2G44920.2,TrEMBL:A5BEJ1,TrEMBL:D7TLP9,TrEMBL:I1LMI2;Derives_from=GSCOCT00004457001;Name=Cc01_g04360;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterized protein,CC_functional_completeness:fragment,CC_gene:At2g44920;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004457001~ Uncharacterized protein~ At2g44920~ fragment;original_location=complement(join(569310..569361%2C568925..569034%2C568718..568813%2C568438..568578));owner=coffea | |
| 5247 chr1 manual_curation exon 13015619 13015759 . - . Parent=GSCOCT00004457001 | |
| 5248 chr1 manual_curation exon 13015899 13015994 . - . Parent=GSCOCT00004457001 | |
| 5249 chr1 manual_curation exon 13016106 13016215 . - . Parent=GSCOCT00004457001 | |
| 5250 chr1 manual_curation exon 13016491 13016542 . - . Parent=GSCOCT00004457001 | |
| 5251 chr1 manual_curation CDS 13015619 13015759 . - 0 Parent=GSCOCT00004457001 | |
| 5252 chr1 manual_curation CDS 13015899 13015994 . - 0 Parent=GSCOCT00004457001 | |
| 5253 chr1 manual_curation CDS 13016106 13016215 . - 1 Parent=GSCOCT00004457001 | |
| 5254 chr1 manual_curation CDS 13016491 13016542 . - 0 Parent=GSCOCT00004457001 | |
| 5255 chr1 manual_curation gene 13155365 13156657 . + . ID=GSCOCG00004460001;Name=Cc01_g04370 | |
| 5256 chr1 manual_curation mRNA 13155365 13156657 . + . ID=GSCOCT00004460001;Parent=GSCOCG00004460001;Name=Cc01_g04370 | |
| 5257 chr1 manual_curation polypeptide 13155365 13156657 . + . ID=GSCOCP00004460001;Dbxref=InterPro:IPR001805,InterPro:IPR011611,PANTHER:PTHR10584:SF24,PFAM:PF00294,PRINTS:PR00989,SwissProt:P55264,SwissProt:Q9LZG0,SwissProt:Q9SF85,TAIR:AT3G09820.1,TAIR:AT5G03300.1,TrEMBL:A9PBT7,TrEMBL:A9PC83,TrEMBL:Q6SV72;Derives_from=GSCOCT00004460001;Name=Cc01_g04370;Ontology_term=CC_evidence_code:ISS,GO:0004001,GO:0006166,CC_EC_number:2.7.1.20,PRODUCT:Adenosine kinase 2,CC_functional_completeness:fragment,CC_gene:ADK2,CC_gene:ADK1,CC_gene:Adk;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004460001~ Adenosine kinase 2~ ADK2~ fragment;original_location=join(708184..708294%2C708715..708782%2C709187..709263%2C709358..709476);owner=coffea | |
| 5258 chr1 manual_curation exon 13155365 13155475 . + . Parent=GSCOCT00004460001 | |
| 5259 chr1 manual_curation exon 13155896 13155963 . + . Parent=GSCOCT00004460001 | |
| 5260 chr1 manual_curation exon 13156368 13156444 . + . Parent=GSCOCT00004460001 | |
| 5261 chr1 manual_curation exon 13156539 13156657 . + . Parent=GSCOCT00004460001 | |
| 5262 chr1 manual_curation CDS 13155365 13155475 . + 0 Parent=GSCOCT00004460001 | |
| 5263 chr1 manual_curation CDS 13155896 13155963 . + 0 Parent=GSCOCT00004460001 | |
| 5264 chr1 manual_curation CDS 13156368 13156444 . + 2 Parent=GSCOCT00004460001 | |
| 5265 chr1 manual_curation CDS 13156539 13156657 . + 1 Parent=GSCOCT00004460001 | |
| 5266 chr1 manual_curation gene 13173147 13180013 . + . ID=GSCOCG00004461001;Name=Cc01_g04380 | |
| 5267 chr1 manual_curation mRNA 13173147 13180013 . + . ID=GSCOCT00004461001;Parent=GSCOCG00004461001;Name=Cc01_g04380 | |
| 5268 chr1 manual_curation polypeptide 13173147 13179496 . + . ID=GSCOCP00004461001;Dbxref=GENE3D:G3DSA:2.100.10.30,InterPro:IPR001229,PFAM:PF01419,SUPERFAMILY:SSF51101,SwissProt:O80950,SwissProt:P82859,SwissProt:P83304,TAIR:AT1G19715.3,TAIR:AT1G33790.2,TAIR:AT3G16460.1,TrEMBL:B9MYG5,TrEMBL:B9MYG7,TrEMBL:B9R811;Derives_from=GSCOCT00004461001;Name=Cc01_g04380;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Mannose/glucose-specific lectin (Fragment),CC_functional_completeness:complete,CC_gene:At2g39310;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004461001~ Mannose/glucose-specific lectin (Fragment)~ At2g39310~ complete;original_location=join(725966..725986%2C728171..728218%2C728308..728511%2C728705..728941%2C731205..731399%2C731588..731827%2C732307..732315);owner=coffea | |
| 5269 chr1 manual_curation exon 13179740 13180013 . + . Parent=GSCOCT00004461001 | |
| 5270 chr1 manual_curation exon 13173147 13173167 . + . Parent=GSCOCT00004461001 | |
| 5271 chr1 manual_curation exon 13175352 13175399 . + . Parent=GSCOCT00004461001 | |
| 5272 chr1 manual_curation exon 13175489 13175692 . + . Parent=GSCOCT00004461001 | |
| 5273 chr1 manual_curation exon 13175886 13176122 . + . Parent=GSCOCT00004461001 | |
| 5274 chr1 manual_curation exon 13178386 13178580 . + . Parent=GSCOCT00004461001 | |
| 5275 chr1 manual_curation exon 13178769 13179008 . + . Parent=GSCOCT00004461001 | |
| 5276 chr1 manual_curation exon 13179488 13179543 . + . Parent=GSCOCT00004461001 | |
| 5277 chr1 manual_curation CDS 13173147 13173167 . + 0 Parent=GSCOCT00004461001 | |
| 5278 chr1 manual_curation CDS 13175352 13175399 . + 0 Parent=GSCOCT00004461001 | |
| 5279 chr1 manual_curation CDS 13175489 13175692 . + 0 Parent=GSCOCT00004461001 | |
| 5280 chr1 manual_curation CDS 13175886 13176122 . + 0 Parent=GSCOCT00004461001 | |
| 5281 chr1 manual_curation CDS 13178386 13178580 . + 0 Parent=GSCOCT00004461001 | |
| 5282 chr1 manual_curation CDS 13178769 13179008 . + 0 Parent=GSCOCT00004461001 | |
| 5283 chr1 manual_curation CDS 13179488 13179496 . + 0 Parent=GSCOCT00004461001 | |
| 5284 chr1 manual_curation gene 13182415 13187020 . - . ID=GSCOCG00004462001;Name=Cc01_g04390 | |
| 5285 chr1 manual_curation mRNA 13182415 13187020 . - . ID=GSCOCT00004462001;Parent=GSCOCG00004462001;Name=Cc01_g04390 | |
| 5286 chr1 manual_curation polypeptide 13182748 13187020 . - . ID=GSCOCP00004462001;Dbxref=TAIR:AT4G12070.1,TrEMBL:A5B888,TrEMBL:F6GU90,TrEMBL:G7IUF0;Derives_from=GSCOCT00004462001;Name=Cc01_g04390;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B INVOLVED IN,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004462001~ unknown protein%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ unknown_gene~ fragment;original_location=complement(join(739761..739839%2C737007..737290%2C736478..736705%2C735567..736079));owner=coffea | |
| 5287 chr1 manual_curation exon 13182415 13183260 . - . Parent=GSCOCT00004462001 | |
| 5288 chr1 manual_curation exon 13183659 13183886 . - . Parent=GSCOCT00004462001 | |
| 5289 chr1 manual_curation exon 13184188 13184471 . - . Parent=GSCOCT00004462001 | |
| 5290 chr1 manual_curation exon 13186942 13187020 . - . Parent=GSCOCT00004462001 | |
| 5291 chr1 manual_curation CDS 13182748 13183260 . - 0 Parent=GSCOCT00004462001 | |
| 5292 chr1 manual_curation CDS 13183659 13183886 . - 0 Parent=GSCOCT00004462001 | |
| 5293 chr1 manual_curation CDS 13184188 13184471 . - 1 Parent=GSCOCT00004462001 | |
| 5294 chr1 manual_curation CDS 13186942 13187020 . - 0 Parent=GSCOCT00004462001 | |
| 5295 chr1 manual_curation gene 13192208 13197610 . - . ID=GSCOCG00004464001;Name=Cc01_g04400 | |
| 5296 chr1 manual_curation mRNA 13192208 13197610 . - . ID=GSCOCT00004464001;Parent=GSCOCG00004464001;Name=Cc01_g04400 | |
| 5297 chr1 manual_curation polypeptide 13192788 13197451 . - . ID=GSCOCP00004464001;Dbxref=TAIR:AT5G12930.1,TrEMBL:B9GW79,TrEMBL:B9RI87,TrEMBL:D7SL89;Derives_from=GSCOCT00004464001;Name=Cc01_g04400;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Predicted protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004464001~ Predicted protein~ unknown_gene~ complete;original_location=complement(join(749884..750270%2C749080..749223%2C748821..748964%2C746499..746618%2C746319..746405%2C745607..746056));owner=coffea | |
| 5298 chr1 manual_curation exon 13192208 13193237 . - . Parent=GSCOCT00004464001 | |
| 5299 chr1 manual_curation exon 13193500 13193586 . - . Parent=GSCOCT00004464001 | |
| 5300 chr1 manual_curation exon 13193680 13193799 . - . Parent=GSCOCT00004464001 | |
| 5301 chr1 manual_curation exon 13196002 13196145 . - . Parent=GSCOCT00004464001 | |
| 5302 chr1 manual_curation exon 13196261 13196404 . - . Parent=GSCOCT00004464001 | |
| 5303 chr1 manual_curation exon 13197065 13197610 . - . Parent=GSCOCT00004464001 | |
| 5304 chr1 manual_curation CDS 13192788 13193237 . - 0 Parent=GSCOCT00004464001 | |
| 5305 chr1 manual_curation CDS 13193500 13193586 . - 0 Parent=GSCOCT00004464001 | |
| 5306 chr1 manual_curation CDS 13193680 13193799 . - 0 Parent=GSCOCT00004464001 | |
| 5307 chr1 manual_curation CDS 13196002 13196145 . - 0 Parent=GSCOCT00004464001 | |
| 5308 chr1 manual_curation CDS 13196261 13196404 . - 0 Parent=GSCOCT00004464001 | |
| 5309 chr1 manual_curation CDS 13197065 13197451 . - 0 Parent=GSCOCT00004464001 | |
| 5310 chr1 manual_curation gene 13231811 13234791 . - . ID=GSCOCG00004467001;Name=Cc01_g04410 | |
| 5311 chr1 manual_curation mRNA 13231811 13234791 . - . ID=GSCOCT00004467001;Parent=GSCOCG00004467001;Name=Cc01_g04410 | |
| 5312 chr1 manual_curation polypeptide 13232299 13234791 . - . ID=GSCOCP00004467001;Dbxref=GENE3D:G3DSA:4.10.280.10,InterPro:IPR001092,InterPro:IPR011598,PFAM:PF00010,PROFILE:PS50888,SMART:SM00353,SUPERFAMILY:SSF47459,SwissProt:Q66GR3,SwissProt:Q9C690,SwissProt:Q9M0R0,TAIR:AT1G51140.1,TAIR:AT2G42280.1,TAIR:AT4G09180.1,TrEMBL:A5B890,TrEMBL:B9RI88,TrEMBL:D7SL88;Derives_from=GSCOCT00004467001;Name=Cc01_g04410;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0030528,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative Transcription factor bHLH122,CC_functional_completeness:complete,CC_gene:BHLH122,CC_gene:BHLH130,CC_gene:BHLH81;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004467001~ Putative Transcription factor bHLH122~ BHLH122~ complete;original_location=complement(join(787028..787610%2C786105..786460%2C785862..786029%2C785507..785572%2C785303..785371%2C785118..785189));owner=coffea | |
| 5313 chr1 manual_curation exon 13231811 13232370 . - . Parent=GSCOCT00004467001 | |
| 5314 chr1 manual_curation exon 13232484 13232552 . - . Parent=GSCOCT00004467001 | |
| 5315 chr1 manual_curation exon 13232688 13232753 . - . Parent=GSCOCT00004467001 | |
| 5316 chr1 manual_curation exon 13233043 13233210 . - . Parent=GSCOCT00004467001 | |
| 5317 chr1 manual_curation exon 13233286 13233641 . - . Parent=GSCOCT00004467001 | |
| 5318 chr1 manual_curation exon 13234209 13234791 . - . Parent=GSCOCT00004467001 | |
| 5319 chr1 manual_curation CDS 13232299 13232370 . - 0 Parent=GSCOCT00004467001 | |
| 5320 chr1 manual_curation CDS 13232484 13232552 . - 0 Parent=GSCOCT00004467001 | |
| 5321 chr1 manual_curation CDS 13232688 13232753 . - 0 Parent=GSCOCT00004467001 | |
| 5322 chr1 manual_curation CDS 13233043 13233210 . - 0 Parent=GSCOCT00004467001 | |
| 5323 chr1 manual_curation CDS 13233286 13233641 . - 1 Parent=GSCOCT00004467001 | |
| 5324 chr1 manual_curation CDS 13234209 13234791 . - 0 Parent=GSCOCT00004467001 | |
| 5325 chr1 manual_curation gene 13234872 13235557 . + . ID=GSCOCG00004468001;Name=Cc01_g04420 | |
| 5326 chr1 manual_curation mRNA 13234872 13235557 . + . ID=GSCOCT00004468001;Parent=GSCOCG00004468001;Name=Cc01_g04420 | |
| 5327 chr1 manual_curation polypeptide 13235333 13235557 . + . ID=GSCOCP00004468001;Derives_from=GSCOCT00004468001;Name=Cc01_g04420;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004468001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=788152..788376;owner=coffea | |
| 5328 chr1 manual_curation exon 13234872 13235557 . + . Parent=GSCOCT00004468001 | |
| 5329 chr1 manual_curation CDS 13235333 13235557 . + 0 Parent=GSCOCT00004468001 | |
| 5330 chr1 manual_curation gene 13274934 13276048 . + . ID=GSCOCG00011936001;Name=Cc01_g04430 | |
| 5331 chr1 manual_curation mRNA 13274934 13276048 . + . ID=GSCOCT00011936001;Parent=GSCOCG00011936001;Name=Cc01_g04430 | |
| 5332 chr1 manual_curation polypeptide 13275800 13276048 . + . ID=GSCOCP00011936001;Derives_from=GSCOCT00011936001;Name=Cc01_g04430;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011936001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=10130..10378;owner=coffea | |
| 5333 chr1 manual_curation exon 13274934 13276048 . + . Parent=GSCOCT00011936001 | |
| 5334 chr1 manual_curation CDS 13275800 13276048 . + 0 Parent=GSCOCT00011936001 | |
| 5335 chr1 manual_curation gene 13487365 13491691 . - . ID=GSCOCG00011940001;Name=Cc01_g04440 | |
| 5336 chr1 manual_curation mRNA 13487365 13491691 . - . ID=GSCOCT00011940001;Parent=GSCOCG00011940001;Name=Cc01_g04440 | |
| 5337 chr1 manual_curation polypeptide 13487850 13490355 . - . ID=GSCOCP00011940001;Dbxref=InterPro:IPR005828,InterPro:IPR005829,InterPro:IPR016196,InterPro:IPR020846,PFAM:PF00083,PROFILE:PS50850,PROSITE:PS00216,SUPERFAMILY:SSF103473,SwissProt:P46333,SwissProt:Q8VZR6,SwissProt:Q9C757,TAIR:AT1G30220.1,TAIR:AT2G43330.1,TAIR:AT3G05150.1,TrEMBL:B9SUS6,TrEMBL:D7LK01,TrEMBL:D7U1M9;Derives_from=GSCOCT00011940001;Name=Cc01_g04440;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006810,GO:0016020,GO:0016021,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Inositol transporter 1,CC_functional_completeness:fragment,CC_gene:INT1,CC_gene:INT2,CC_gene:csbC;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011940001~ Inositol transporter 1~ INT1~ fragment;original_location=complement(join(224680..224685%2C224518..224625%2C224246..224431%2C222812..222830%2C222180..222715));owner=coffea | |
| 5338 chr1 manual_curation exon 13487365 13488385 . - . Parent=GSCOCT00011940001 | |
| 5339 chr1 manual_curation exon 13488482 13488500 . - . Parent=GSCOCT00011940001 | |
| 5340 chr1 manual_curation exon 13489916 13490101 . - . Parent=GSCOCT00011940001 | |
| 5341 chr1 manual_curation exon 13490188 13490295 . - . Parent=GSCOCT00011940001 | |
| 5342 chr1 manual_curation exon 13490350 13491691 . - . Parent=GSCOCT00011940001 | |
| 5343 chr1 manual_curation CDS 13487850 13488385 . - 1 Parent=GSCOCT00011940001 | |
| 5344 chr1 manual_curation CDS 13488482 13488500 . - 0 Parent=GSCOCT00011940001 | |
| 5345 chr1 manual_curation CDS 13489916 13490101 . - 0 Parent=GSCOCT00011940001 | |
| 5346 chr1 manual_curation CDS 13490188 13490295 . - 0 Parent=GSCOCT00011940001 | |
| 5347 chr1 manual_curation CDS 13490350 13490355 . - 0 Parent=GSCOCT00011940001 | |
| 5348 chr1 manual_curation gene 13491752 13496015 . - . ID=GSCOCG00011941001;Name=Cc01_g04450 | |
| 5349 chr1 manual_curation mRNA 13491752 13496015 . - . ID=GSCOCT00011941001;Parent=GSCOCG00011941001;Name=Cc01_g04450 | |
| 5350 chr1 manual_curation polypeptide 13491825 13495595 . - . ID=GSCOCP00011941001;Dbxref=InterPro:IPR003663,InterPro:IPR005828,InterPro:IPR005829,InterPro:IPR016196,InterPro:IPR020846,PFAM:PF00083,PRINTS:PR00171,PROFILE:PS50850,PROSITE:PS00217,SUPERFAMILY:SSF103473,SwissProt:Q8VZR6,SwissProt:Q9C757,SwissProt:Q9ZQP6,TAIR:AT1G30220.1,TAIR:AT2G35740.1,TAIR:AT2G43330.1,TrEMBL:D7U1M9,TrEMBL:G7JAP8,TrEMBL:Q84UY4;Derives_from=GSCOCT00011941001;Name=Cc01_g04450;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006810,GO:0016020,GO:0016021,GO:0022891,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Inositol transporter 1,CC_functional_completeness:fragment,CC_gene:INT1,CC_gene:INT3,CC_gene:INT2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011941001~ Inositol transporter 1~ INT1~ fragment;original_location=complement(join(229787..229925%2C227787..227857%2C226950..227285%2C226155..226199));owner=coffea | |
| 5351 chr1 manual_curation exon 13491752 13491869 . - . Parent=GSCOCT00011941001 | |
| 5352 chr1 manual_curation exon 13492620 13492955 . - . Parent=GSCOCT00011941001 | |
| 5353 chr1 manual_curation exon 13493457 13493527 . - . Parent=GSCOCT00011941001 | |
| 5354 chr1 manual_curation exon 13495457 13496015 . - . Parent=GSCOCT00011941001 | |
| 5355 chr1 manual_curation CDS 13491825 13491869 . - 0 Parent=GSCOCT00011941001 | |
| 5356 chr1 manual_curation CDS 13492620 13492955 . - 0 Parent=GSCOCT00011941001 | |
| 5357 chr1 manual_curation CDS 13493457 13493527 . - 1 Parent=GSCOCT00011941001 | |
| 5358 chr1 manual_curation CDS 13495457 13495595 . - 0 Parent=GSCOCT00011941001 | |
| 5359 chr1 manual_curation gene 13695409 13695564 . - . ID=GSCOCG00011257001;Name=Cc01_g04460 | |
| 5360 chr1 manual_curation mRNA 13695409 13695564 . - . ID=GSCOCT00011257001;Parent=GSCOCG00011257001;Name=Cc01_g04460 | |
| 5361 chr1 manual_curation polypeptide 13695409 13695564 . - . ID=GSCOCP00011257001;Dbxref=GENE3D:G3DSA:1.10.1650.10,InterPro:IPR000196,InterPro:IPR015972,PFAM:PF01280,SUPERFAMILY:SSF48140;Derives_from=GSCOCT00011257001;Name=Cc01_g04460;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:Putative Ribosomal protein L19/L19e,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011257001~ Putative Ribosomal protein L19/L19e~ unknown_gene~ complete;original_location=complement(3099..3254);owner=coffea | |
| 5362 chr1 manual_curation exon 13695409 13695564 . - . Parent=GSCOCT00011257001 | |
| 5363 chr1 manual_curation CDS 13695409 13695564 . - 0 Parent=GSCOCT00011257001 | |
| 5364 chr1 manual_curation gene 13840054 13848929 . - . ID=GSCOCG00011258001;Name=Cc01_g04470 | |
| 5365 chr1 manual_curation mRNA 13840054 13848929 . - . ID=GSCOCT00011258001;Parent=GSCOCG00011258001;Name=Cc01_g04470 | |
| 5366 chr1 manual_curation polypeptide 13840290 13848686 . - . ID=GSCOCP00011258001;Dbxref=InterPro:IPR004728,PANTHER:PTHR12443,PFAM:PF03839,TAIR:AT3G20920.1,TrEMBL:D7SL35,TrEMBL:G7IYA2,TrEMBL:I1N055;Derives_from=GSCOCT00011258001;Name=Cc01_g04470;Ontology_term=CC_evidence_code:ISS,GO:0008565,GO:0015031,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:translocation protein-related,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011258001~ translocation protein-related~ unknown_gene~ complete;original_location=complement(join(156299..156376%2C154850..155164%2C151653..151854%2C149027..149255%2C147980..148280));owner=coffea | |
| 5367 chr1 manual_curation exon 13840054 13840590 . - . Parent=GSCOCT00011258001 | |
| 5368 chr1 manual_curation exon 13841337 13841565 . - . Parent=GSCOCT00011258001 | |
| 5369 chr1 manual_curation exon 13843963 13844164 . - . Parent=GSCOCT00011258001 | |
| 5370 chr1 manual_curation exon 13847160 13847474 . - . Parent=GSCOCT00011258001 | |
| 5371 chr1 manual_curation exon 13848609 13848929 . - . Parent=GSCOCT00011258001 | |
| 5372 chr1 manual_curation CDS 13840290 13840590 . - 2 Parent=GSCOCT00011258001 | |
| 5373 chr1 manual_curation CDS 13841337 13841565 . - 1 Parent=GSCOCT00011258001 | |
| 5374 chr1 manual_curation CDS 13843963 13844164 . - 0 Parent=GSCOCT00011258001 | |
| 5375 chr1 manual_curation CDS 13847160 13847474 . - 0 Parent=GSCOCT00011258001 | |
| 5376 chr1 manual_curation CDS 13848609 13848686 . - 0 Parent=GSCOCT00011258001 | |
| 5377 chr1 manual_curation gene 13943311 13949266 . + . ID=GSCOCG00041166001;Name=Cc01_g04480 | |
| 5378 chr1 manual_curation mRNA 13943311 13949266 . + . ID=GSCOCT00041166001;Parent=GSCOCG00041166001;Name=Cc01_g04480 | |
| 5379 chr1 manual_curation polypeptide 13943311 13948541 . + . ID=GSCOCP00041166001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q6YY75,SwissProt:Q94CU5,SwissProt:Q9LT35,TAIR:AT3G20860.1,TAIR:AT3G44200.1,TAIR:AT3G63280.1,TrEMBL:B9GM77,TrEMBL:B9GW98,TrEMBL:D7KZX4;Derives_from=GSCOCT00041166001;Name=Cc01_g04480;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.1,PRODUCT:Serine/threonine-protein kinase Nek6,CC_functional_completeness:complete,CC_gene:NEK6,CC_gene:NEK5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00041166001~ Serine/threonine-protein kinase Nek6~ NEK6~ complete;original_location=join(29796..29914%2C30445..30511%2C30769..30834%2C30978..31024%2C31312..31357%2C31439..31519%2C31691..31733%2C31818..31867%2C33322..33403%2C33509..33558%2C33661..33734%2C33866..33917%2C33989..34181%2C34371..34478%2C34701..35026);owner=coffea | |
| 5380 chr1 manual_curation exon 13943311 13943429 . + . Parent=GSCOCT00041166001 | |
| 5381 chr1 manual_curation exon 13943960 13944026 . + . Parent=GSCOCT00041166001 | |
| 5382 chr1 manual_curation exon 13944284 13944349 . + . Parent=GSCOCT00041166001 | |
| 5383 chr1 manual_curation exon 13944493 13944539 . + . Parent=GSCOCT00041166001 | |
| 5384 chr1 manual_curation exon 13944827 13944872 . + . Parent=GSCOCT00041166001 | |
| 5385 chr1 manual_curation exon 13944954 13945034 . + . Parent=GSCOCT00041166001 | |
| 5386 chr1 manual_curation exon 13945206 13945248 . + . Parent=GSCOCT00041166001 | |
| 5387 chr1 manual_curation exon 13945333 13945382 . + . Parent=GSCOCT00041166001 | |
| 5388 chr1 manual_curation exon 13946837 13946918 . + . Parent=GSCOCT00041166001 | |
| 5389 chr1 manual_curation exon 13947024 13947073 . + . Parent=GSCOCT00041166001 | |
| 5390 chr1 manual_curation exon 13947176 13947249 . + . Parent=GSCOCT00041166001 | |
| 5391 chr1 manual_curation exon 13947381 13947432 . + . Parent=GSCOCT00041166001 | |
| 5392 chr1 manual_curation exon 13947504 13947696 . + . Parent=GSCOCT00041166001 | |
| 5393 chr1 manual_curation exon 13947886 13947993 . + . Parent=GSCOCT00041166001 | |
| 5394 chr1 manual_curation exon 13948216 13949266 . + . Parent=GSCOCT00041166001 | |
| 5395 chr1 manual_curation CDS 13943311 13943429 . + 0 Parent=GSCOCT00041166001 | |
| 5396 chr1 manual_curation CDS 13943960 13944026 . + 2 Parent=GSCOCT00041166001 | |
| 5397 chr1 manual_curation CDS 13944284 13944349 . + 0 Parent=GSCOCT00041166001 | |
| 5398 chr1 manual_curation CDS 13944493 13944539 . + 0 Parent=GSCOCT00041166001 | |
| 5399 chr1 manual_curation CDS 13944827 13944872 . + 2 Parent=GSCOCT00041166001 | |
| 5400 chr1 manual_curation CDS 13944954 13945034 . + 0 Parent=GSCOCT00041166001 | |
| 5401 chr1 manual_curation CDS 13945206 13945248 . + 0 Parent=GSCOCT00041166001 | |
| 5402 chr1 manual_curation CDS 13945333 13945382 . + 1 Parent=GSCOCT00041166001 | |
| 5403 chr1 manual_curation CDS 13946837 13946918 . + 0 Parent=GSCOCT00041166001 | |
| 5404 chr1 manual_curation CDS 13947024 13947073 . + 1 Parent=GSCOCT00041166001 | |
| 5405 chr1 manual_curation CDS 13947176 13947249 . + 0 Parent=GSCOCT00041166001 | |
| 5406 chr1 manual_curation CDS 13947381 13947432 . + 2 Parent=GSCOCT00041166001 | |
| 5407 chr1 manual_curation CDS 13947504 13947696 . + 0 Parent=GSCOCT00041166001 | |
| 5408 chr1 manual_curation CDS 13947886 13947993 . + 1 Parent=GSCOCT00041166001 | |
| 5409 chr1 manual_curation CDS 13948216 13948541 . + 1 Parent=GSCOCT00041166001 | |
| 5410 chr1 manual_curation gene 14015971 14024217 . + . ID=GSCOCG00041167001;Name=Cc01_g04490 | |
| 5411 chr1 manual_curation mRNA 14015971 14024217 . + . ID=GSCOCT00041167001;Parent=GSCOCG00041167001;Name=Cc01_g04490 | |
| 5412 chr1 manual_curation polypeptide 14016230 14023713 . + . ID=GSCOCP00041167001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q9CAN0,SwissProt:Q9CAN5,SwissProt:Q9SGQ6,TAIR:AT1G63080.1,TAIR:AT1G63130.1,TAIR:AT1G76280.3,TIGRFAMs:TIGR00756,TrEMBL:B9GMC2,TrEMBL:D7RNT7,TrEMBL:F6H0B0;Derives_from=GSCOCT00041167001;Name=Cc01_g04490;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Pentatricopeptide repeat-containing protein At1g76280,CC_functional_completeness:complete,CC_gene:At1g76280,CC_gene:At1g63130,CC_gene:At1g63080;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00041167001~ Putative Pentatricopeptide repeat-containing protein At1g76280~ At1g76280~ complete;original_location=join(102715..102728%2C102896..102959%2C103117..103174%2C103313..103497%2C104048..104155%2C105165..105347%2C105987..106508%2C106728..106823%2C107085..107258%2C107638..107865%2C108175..108318%2C108547..108735%2C109012..109131%2C109803..110198);owner=coffea | |
| 5413 chr1 manual_curation exon 14015971 14016243 . + . Parent=GSCOCT00041167001 | |
| 5414 chr1 manual_curation exon 14016411 14016474 . + . Parent=GSCOCT00041167001 | |
| 5415 chr1 manual_curation exon 14016632 14016689 . + . Parent=GSCOCT00041167001 | |
| 5416 chr1 manual_curation exon 14016828 14017012 . + . Parent=GSCOCT00041167001 | |
| 5417 chr1 manual_curation exon 14017563 14017670 . + . Parent=GSCOCT00041167001 | |
| 5418 chr1 manual_curation exon 14018680 14018862 . + . Parent=GSCOCT00041167001 | |
| 5419 chr1 manual_curation exon 14019502 14020023 . + . Parent=GSCOCT00041167001 | |
| 5420 chr1 manual_curation exon 14020243 14020338 . + . Parent=GSCOCT00041167001 | |
| 5421 chr1 manual_curation exon 14020600 14020773 . + . Parent=GSCOCT00041167001 | |
| 5422 chr1 manual_curation exon 14021153 14021380 . + . Parent=GSCOCT00041167001 | |
| 5423 chr1 manual_curation exon 14021690 14021833 . + . Parent=GSCOCT00041167001 | |
| 5424 chr1 manual_curation exon 14022062 14022250 . + . Parent=GSCOCT00041167001 | |
| 5425 chr1 manual_curation exon 14022527 14022646 . + . Parent=GSCOCT00041167001 | |
| 5426 chr1 manual_curation exon 14023318 14024217 . + . Parent=GSCOCT00041167001 | |
| 5427 chr1 manual_curation CDS 14016230 14016243 . + 0 Parent=GSCOCT00041167001 | |
| 5428 chr1 manual_curation CDS 14016411 14016474 . + 2 Parent=GSCOCT00041167001 | |
| 5429 chr1 manual_curation CDS 14016632 14016689 . + 0 Parent=GSCOCT00041167001 | |
| 5430 chr1 manual_curation CDS 14016828 14017012 . + 1 Parent=GSCOCT00041167001 | |
| 5431 chr1 manual_curation CDS 14017563 14017670 . + 0 Parent=GSCOCT00041167001 | |
| 5432 chr1 manual_curation CDS 14018680 14018862 . + 0 Parent=GSCOCT00041167001 | |
| 5433 chr1 manual_curation CDS 14019502 14020023 . + 0 Parent=GSCOCT00041167001 | |
| 5434 chr1 manual_curation CDS 14020243 14020338 . + 0 Parent=GSCOCT00041167001 | |
| 5435 chr1 manual_curation CDS 14020600 14020773 . + 0 Parent=GSCOCT00041167001 | |
| 5436 chr1 manual_curation CDS 14021153 14021380 . + 0 Parent=GSCOCT00041167001 | |
| 5437 chr1 manual_curation CDS 14021690 14021833 . + 0 Parent=GSCOCT00041167001 | |
| 5438 chr1 manual_curation CDS 14022062 14022250 . + 0 Parent=GSCOCT00041167001 | |
| 5439 chr1 manual_curation CDS 14022527 14022646 . + 0 Parent=GSCOCT00041167001 | |
| 5440 chr1 manual_curation CDS 14023318 14023713 . + 0 Parent=GSCOCT00041167001 | |
| 5441 chr1 manual_curation gene 14034798 14037348 . + . ID=GSCOCG00041168001;Name=Cc01_g04500 | |
| 5442 chr1 manual_curation mRNA 14034798 14037348 . + . ID=GSCOCT00041168001;Parent=GSCOCG00041168001;Name=Cc01_g04500 | |
| 5443 chr1 manual_curation polypeptide 14035010 14036437 . + . ID=GSCOCP00041168001;Dbxref=InterPro:IPR002867,PFAM:PF01485,SMART:SM00647,SwissProt:P0C8K8,SwissProt:Q84RR0,SwissProt:Q8W468,TAIR:AT1G05890.2,TAIR:AT1G65430.1,TAIR:AT2G31510.1,TrEMBL:B9FFV9,TrEMBL:B9RM26,TrEMBL:I1IBD0;Derives_from=GSCOCT00041168001;Name=Cc01_g04500;Ontology_term=CC_evidence_code:ISS,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:ARI8,CC_gene:ARI7,CC_gene:ARI6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00041168001~ Putative uncharacterized protein~ ARI8~ complete;original_location=121495..122922;owner=coffea | |
| 5444 chr1 manual_curation exon 14034798 14037348 . + . Parent=GSCOCT00041168001 | |
| 5445 chr1 manual_curation CDS 14035010 14036437 . + 0 Parent=GSCOCT00041168001 | |
| 5446 chr1 manual_curation gene 14176868 14177895 . + . ID=GSCOCG00041173001;Name=Cc01_g04510 | |
| 5447 chr1 manual_curation mRNA 14176868 14177895 . + . ID=GSCOCT00041173001;Parent=GSCOCG00041173001;Name=Cc01_g04510 | |
| 5448 chr1 manual_curation polypeptide 14176868 14177730 . + . ID=GSCOCP00041173001;Dbxref=InterPro:IPR002921,PFAM:PF01764,TAIR:AT1G45201.1,TAIR:AT1G56630.1,TAIR:AT5G42930.1,TrEMBL:D7SVX1,TrEMBL:G7I3I7,TrEMBL:G7I3I8;Derives_from=GSCOCT00041173001;Name=Cc01_g04510;Ontology_term=CC_evidence_code:ISS,GO:0004806,GO:0006629,CC_EC_number:missing_EC_number,PRODUCT:alpha/beta-Hydrolases superfamily protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00041173001~ alpha/beta-Hydrolases superfamily protein~ unknown_gene~ fragment;original_location=join(263353..263838%2C263946..264215);owner=coffea | |
| 5449 chr1 manual_curation exon 14176868 14177353 . + . Parent=GSCOCT00041173001 | |
| 5450 chr1 manual_curation exon 14177461 14177895 . + . Parent=GSCOCT00041173001 | |
| 5451 chr1 manual_curation CDS 14176868 14177353 . + 0 Parent=GSCOCT00041173001 | |
| 5452 chr1 manual_curation CDS 14177461 14177730 . + 0 Parent=GSCOCT00041173001 | |
| 5453 chr1 manual_curation gene 14256517 14263608 . + . ID=GSCOCG00041176001;Name=Cc01_g04520 | |
| 5454 chr1 manual_curation mRNA 14256517 14263608 . + . ID=GSCOCT00041176001;Parent=GSCOCG00041176001;Name=Cc01_g04520 | |
| 5455 chr1 manual_curation polypeptide 14256656 14262938 . + . ID=GSCOCP00041176001;Dbxref=InterPro:IPR005117,InterPro:IPR006066,InterPro:IPR006067,InterPro:IPR011787,PFAM:PF01077,PFAM:PF03460,PRINTS:PR00397,PROSITE:PS00365,SUPERFAMILY:SSF55124,SwissProt:O82802,SwissProt:Q75NZ0,SwissProt:Q9LZ66,TAIR:AT2G15620.1,TAIR:AT5G04590.1,TIGRFAMs:TIGR02042,TrEMBL:B9RIC6,TrEMBL:C0JT31,TrEMBL:H6WYS2;Derives_from=GSCOCT00041176001;Name=Cc01_g04520;Ontology_term=CC_evidence_code:ISS,GO:0016491,GO:0020037,GO:0050311,GO:0051536,GO:0055114,CC_EC_number:1.8.1.2,CC_EC_number:1.8.1.2,PRODUCT:Sulfite reductase 1 [ferredoxin]%2C chloroplastic,CC_functional_completeness:complete,CC_gene:SIR1,CC_gene:SIR;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00041176001~ Sulfite reductase 1 [ferredoxin]%2C chloroplastic~ SIR1~ complete;original_location=join(343141..343383%2C344255..345037%2C345122..345418%2C345637..345834%2C348342..348476%2C348583..348699%2C348839..348997%2C349217..349423);owner=coffea | |
| 5456 chr1 manual_curation exon 14256517 14256898 . + . Parent=GSCOCT00041176001 | |
| 5457 chr1 manual_curation exon 14257770 14258552 . + . Parent=GSCOCT00041176001 | |
| 5458 chr1 manual_curation exon 14258637 14258933 . + . Parent=GSCOCT00041176001 | |
| 5459 chr1 manual_curation exon 14259152 14259349 . + . Parent=GSCOCT00041176001 | |
| 5460 chr1 manual_curation exon 14261857 14261991 . + . Parent=GSCOCT00041176001 | |
| 5461 chr1 manual_curation exon 14262098 14262214 . + . Parent=GSCOCT00041176001 | |
| 5462 chr1 manual_curation exon 14262354 14262512 . + . Parent=GSCOCT00041176001 | |
| 5463 chr1 manual_curation exon 14262732 14263608 . + . Parent=GSCOCT00041176001 | |
| 5464 chr1 manual_curation CDS 14256656 14256898 . + 0 Parent=GSCOCT00041176001 | |
| 5465 chr1 manual_curation CDS 14257770 14258552 . + 0 Parent=GSCOCT00041176001 | |
| 5466 chr1 manual_curation CDS 14258637 14258933 . + 0 Parent=GSCOCT00041176001 | |
| 5467 chr1 manual_curation CDS 14259152 14259349 . + 0 Parent=GSCOCT00041176001 | |
| 5468 chr1 manual_curation CDS 14261857 14261991 . + 0 Parent=GSCOCT00041176001 | |
| 5469 chr1 manual_curation CDS 14262098 14262214 . + 0 Parent=GSCOCT00041176001 | |
| 5470 chr1 manual_curation CDS 14262354 14262512 . + 0 Parent=GSCOCT00041176001 | |
| 5471 chr1 manual_curation CDS 14262732 14262938 . + 0 Parent=GSCOCT00041176001 | |
| 5472 chr1 manual_curation gene 14275531 14280333 . + . ID=GSCOCG00041177001;Name=Cc01_g04530 | |
| 5473 chr1 manual_curation mRNA 14275531 14280333 . + . ID=GSCOCT00041177001;Parent=GSCOCG00041177001;Name=Cc01_g04530 | |
| 5474 chr1 manual_curation polypeptide 14275531 14280115 . + . ID=GSCOCP00041177001;Dbxref=TAIR:AT1G51405.1,TrEMBL:B9GEZ3,TrEMBL:B9RIC3,TrEMBL:F6GU36;Derives_from=GSCOCT00041177001;Name=Cc01_g04530;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative myosin-related,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00041177001~ Putative myosin-related~ unknown_gene~ complete;original_location=join(362016..362173%2C362207..362579%2C363100..363405%2C363701..363846%2C365241..365484%2C366115..366280%2C366443..366600);owner=coffea | |
| 5475 chr1 manual_curation exon 14275531 14275688 . + . Parent=GSCOCT00041177001 | |
| 5476 chr1 manual_curation exon 14275722 14276094 . + . Parent=GSCOCT00041177001 | |
| 5477 chr1 manual_curation exon 14276615 14276920 . + . Parent=GSCOCT00041177001 | |
| 5478 chr1 manual_curation exon 14277216 14277361 . + . Parent=GSCOCT00041177001 | |
| 5479 chr1 manual_curation exon 14278756 14278999 . + . Parent=GSCOCT00041177001 | |
| 5480 chr1 manual_curation exon 14279630 14279795 . + . Parent=GSCOCT00041177001 | |
| 5481 chr1 manual_curation exon 14279958 14280333 . + . Parent=GSCOCT00041177001 | |
| 5482 chr1 manual_curation CDS 14275531 14275688 . + 0 Parent=GSCOCT00041177001 | |
| 5483 chr1 manual_curation CDS 14275722 14276094 . + 2 Parent=GSCOCT00041177001 | |
| 5484 chr1 manual_curation CDS 14276615 14276920 . + 0 Parent=GSCOCT00041177001 | |
| 5485 chr1 manual_curation CDS 14277216 14277361 . + 0 Parent=GSCOCT00041177001 | |
| 5486 chr1 manual_curation CDS 14278756 14278999 . + 2 Parent=GSCOCT00041177001 | |
| 5487 chr1 manual_curation CDS 14279630 14279795 . + 0 Parent=GSCOCT00041177001 | |
| 5488 chr1 manual_curation CDS 14279958 14280115 . + 1 Parent=GSCOCT00041177001 | |
| 5489 chr1 manual_curation gene 14323535 14324847 . - . ID=GSCOCG00041181001;Name=Cc01_g04540 | |
| 5490 chr1 manual_curation mRNA 14323535 14324847 . - . ID=GSCOCT00041181001;Parent=GSCOCG00041181001;Name=Cc01_g04540 | |
| 5491 chr1 manual_curation polypeptide 14323535 14324847 . - . ID=GSCOCP00041181001;Dbxref=InterPro:IPR003441,PFAM:PF02365,PROFILE:PS51005,SUPERFAMILY:SSF101941,SwissProt:Q93VY3,SwissProt:Q9C932,SwissProt:Q9LDY8,TAIR:AT1G52890.1,TAIR:AT3G15500.1,TAIR:AT4G27410.3,TrEMBL:B9HNX8,TrEMBL:B9HNX9,TrEMBL:B9RIE3;Derives_from=GSCOCT00041181001;Name=Cc01_g04540;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:NAC019,CC_gene:NAC055,CC_gene:NAC072;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00041181001~ Hypothetical protein~ NAC019~ missing_functional_completeness;original_location=complement(join(411256..411332%2C410731..411052%2C410020..410640));owner=coffea | |
| 5492 chr1 manual_curation exon 14323535 14324155 . - . Parent=GSCOCT00041181001 | |
| 5493 chr1 manual_curation exon 14324246 14324567 . - . Parent=GSCOCT00041181001 | |
| 5494 chr1 manual_curation exon 14324771 14324847 . - . Parent=GSCOCT00041181001 | |
| 5495 chr1 manual_curation CDS 14323535 14324155 . - 0 Parent=GSCOCT00041181001 | |
| 5496 chr1 manual_curation CDS 14324246 14324567 . - 2 Parent=GSCOCT00041181001 | |
| 5497 chr1 manual_curation CDS 14324771 14324847 . - 0 Parent=GSCOCT00041181001 | |
| 5498 chr1 manual_curation gene 14483283 14483550 . - . ID=GSCOCG00041184001;Name=Cc01_g04550 | |
| 5499 chr1 manual_curation mRNA 14483283 14483550 . - . ID=GSCOCT00041184001;Parent=GSCOCG00041184001;Name=Cc01_g04550 | |
| 5500 chr1 manual_curation polypeptide 14483351 14483550 . - . ID=GSCOCP00041184001;Derives_from=GSCOCT00041184001;Name=Cc01_g04550;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00041184001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(569910..570035%2C569836..569853));owner=coffea | |
| 5501 chr1 manual_curation exon 14483283 14483368 . - . Parent=GSCOCT00041184001 | |
| 5502 chr1 manual_curation exon 14483425 14483550 . - . Parent=GSCOCT00041184001 | |
| 5503 chr1 manual_curation CDS 14483351 14483368 . - 0 Parent=GSCOCT00041184001 | |
| 5504 chr1 manual_curation CDS 14483425 14483550 . - 0 Parent=GSCOCT00041184001 | |
| 5505 chr1 manual_curation gene 14491245 14493481 . - . ID=GSCOCG00041185001;Name=Cc01_g04560 | |
| 5506 chr1 manual_curation mRNA 14491245 14493481 . - . ID=GSCOCT00041185001;Parent=GSCOCG00041185001;Name=Cc01_g04560 | |
| 5507 chr1 manual_curation polypeptide 14491245 14493481 . - . ID=GSCOCP00041185001;Dbxref=InterPro:IPR003441,PFAM:PF02365,PROFILE:PS51005,SUPERFAMILY:SSF101941,SwissProt:Q93VY3,SwissProt:Q9C932,SwissProt:Q9LDY8,TAIR:AT1G52890.1,TAIR:AT3G04070.1,TAIR:AT3G15500.1,TrEMBL:B9HNX8,TrEMBL:B9HNX9,TrEMBL:B9RIE3;Derives_from=GSCOCT00041185001;Name=Cc01_g04560;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:NAC019,CC_gene:NAC072,CC_gene:NAC055;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00041185001~ Hypothetical protein~ NAC019~ missing_functional_completeness;original_location=complement(join(579675..579966%2C579556..579591%2C578441..578721%2C577730..578350));owner=coffea | |
| 5508 chr1 manual_curation exon 14491245 14491865 . - . Parent=GSCOCT00041185001 | |
| 5509 chr1 manual_curation exon 14491956 14492236 . - . Parent=GSCOCT00041185001 | |
| 5510 chr1 manual_curation exon 14493071 14493106 . - . Parent=GSCOCT00041185001 | |
| 5511 chr1 manual_curation exon 14493190 14493481 . - . Parent=GSCOCT00041185001 | |
| 5512 chr1 manual_curation CDS 14491245 14491865 . - 0 Parent=GSCOCT00041185001 | |
| 5513 chr1 manual_curation CDS 14491956 14492236 . - 1 Parent=GSCOCT00041185001 | |
| 5514 chr1 manual_curation CDS 14493071 14493106 . - 1 Parent=GSCOCT00041185001 | |
| 5515 chr1 manual_curation CDS 14493190 14493481 . - 0 Parent=GSCOCT00041185001 | |
| 5516 chr1 manual_curation gene 14584379 14585089 . - . ID=GSCOCG00041187001;Name=Cc01_g04570 | |
| 5517 chr1 manual_curation mRNA 14584379 14585089 . - . ID=GSCOCT00041187001;Parent=GSCOCG00041187001;Name=Cc01_g04570 | |
| 5518 chr1 manual_curation polypeptide 14584379 14585089 . - . ID=GSCOCP00041187001;Dbxref=TAIR:AT2G47485.1,TAIR:AT3G62650.2,TrEMBL:A5BS11,TrEMBL:I1JBI8,TrEMBL:I1L7S5;Derives_from=GSCOCT00041187001;Name=Cc01_g04570;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00041187001~ Putative unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G47485.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink).~ unknown_gene~ modules;original_location=complement(670864..671574);owner=coffea | |
| 5519 chr1 manual_curation exon 14584379 14585089 . - . Parent=GSCOCT00041187001 | |
| 5520 chr1 manual_curation CDS 14584379 14585089 . - 0 Parent=GSCOCT00041187001 | |
| 5521 chr1 manual_curation gene 14603548 14604901 . + . ID=GSCOCG00041188001;Name=Cc01_g04580 | |
| 5522 chr1 manual_curation mRNA 14603548 14604901 . + . ID=GSCOCT00041188001;Parent=GSCOCG00041188001;Name=Cc01_g04580 | |
| 5523 chr1 manual_curation polypeptide 14603970 14604344 . + . ID=GSCOCP00041188001;Derives_from=GSCOCT00041188001;Name=Cc01_g04580;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00041188001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=690455..690829;owner=coffea | |
| 5524 chr1 manual_curation exon 14603548 14604901 . + . Parent=GSCOCT00041188001 | |
| 5525 chr1 manual_curation CDS 14603970 14604344 . + 0 Parent=GSCOCT00041188001 | |
| 5526 chr1 manual_curation gene 14979333 14981287 . - . ID=GSCOCG00041199001;Name=Cc01_g04590 | |
| 5527 chr1 manual_curation mRNA 14979333 14981287 . - . ID=GSCOCT00041199001;Parent=GSCOCG00041199001;Name=Cc01_g04590 | |
| 5528 chr1 manual_curation polypeptide 14979333 14981287 . - . ID=GSCOCP00041199001;Dbxref=InterPro:IPR003441,PFAM:PF02365,PROFILE:PS51005,SUPERFAMILY:SSF101941,SwissProt:O49255,SwissProt:Q52QH4,SwissProt:Q9LDY8,TAIR:AT1G69490.1,TAIR:AT3G04070.1,TAIR:AT3G15500.1,TrEMBL:B9HNX8,TrEMBL:B9HNX9,TrEMBL:B9RIE3;Derives_from=GSCOCT00041199001;Name=Cc01_g04590;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:NAC029,CC_gene:NAC68,CC_gene:NAC055;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00041199001~ Hypothetical protein~ NAC029~ missing_functional_completeness;original_location=complement(join(1067457..1067772%2C1066677..1066960%2C1065818..1066267));owner=coffea | |
| 5529 chr1 manual_curation exon 14979333 14979782 . - . Parent=GSCOCT00041199001 | |
| 5530 chr1 manual_curation exon 14980192 14980475 . - . Parent=GSCOCT00041199001 | |
| 5531 chr1 manual_curation exon 14980972 14981287 . - . Parent=GSCOCT00041199001 | |
| 5532 chr1 manual_curation CDS 14979333 14979782 . - 0 Parent=GSCOCT00041199001 | |
| 5533 chr1 manual_curation CDS 14980192 14980475 . - 1 Parent=GSCOCT00041199001 | |
| 5534 chr1 manual_curation CDS 14980972 14981287 . - 0 Parent=GSCOCT00041199001 | |
| 5535 chr1 manual_curation gene 15089625 15091262 . - . ID=GSCOCG00041200001;Name=Cc01_g04600 | |
| 5536 chr1 manual_curation mRNA 15089625 15091262 . - . ID=GSCOCT00041200001;Parent=GSCOCG00041200001;Name=Cc01_g04600 | |
| 5537 chr1 manual_curation polypeptide 15089625 15091262 . - . ID=GSCOCP00041200001;Dbxref=InterPro:IPR000620,PFAM:PF00892,SwissProt:Q6J163,TAIR:AT1G09380.1,TAIR:AT1G68170.1,TAIR:AT1G75500.1,TrEMBL:B9I280,TrEMBL:B9S0T3,TrEMBL:G7IW30;Derives_from=GSCOCT00041200001;Name=Cc01_g04600;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative Auxin-induced protein 5NG4,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00041200001~ Putative Auxin-induced protein 5NG4~ unknown_gene~ fragment;original_location=complement(join(1177638..1177747%2C1177182..1177416%2C1176904..1177062%2C1176645..1176796%2C1176346..1176562%2C1176110..1176229));owner=coffea | |
| 5538 chr1 manual_curation exon 15089625 15089744 . - . Parent=GSCOCT00041200001 | |
| 5539 chr1 manual_curation exon 15089861 15090077 . - . Parent=GSCOCT00041200001 | |
| 5540 chr1 manual_curation exon 15090160 15090311 . - . Parent=GSCOCT00041200001 | |
| 5541 chr1 manual_curation exon 15090419 15090577 . - . Parent=GSCOCT00041200001 | |
| 5542 chr1 manual_curation exon 15090697 15090931 . - . Parent=GSCOCT00041200001 | |
| 5543 chr1 manual_curation exon 15091153 15091262 . - . Parent=GSCOCT00041200001 | |
| 5544 chr1 manual_curation CDS 15089625 15089744 . - 0 Parent=GSCOCT00041200001 | |
| 5545 chr1 manual_curation CDS 15089861 15090077 . - 2 Parent=GSCOCT00041200001 | |
| 5546 chr1 manual_curation CDS 15090160 15090311 . - 0 Parent=GSCOCT00041200001 | |
| 5547 chr1 manual_curation CDS 15090419 15090577 . - 0 Parent=GSCOCT00041200001 | |
| 5548 chr1 manual_curation CDS 15090697 15090931 . - 2 Parent=GSCOCT00041200001 | |
| 5549 chr1 manual_curation CDS 15091153 15091262 . - 0 Parent=GSCOCT00041200001 | |
| 5550 chr1 manual_curation gene 15093026 15093869 . - . ID=GSCOCG00041201001;Name=Cc01_g04610 | |
| 5551 chr1 manual_curation mRNA 15093026 15093869 . - . ID=GSCOCT00041201001;Parent=GSCOCG00041201001;Name=Cc01_g04610 | |
| 5552 chr1 manual_curation polypeptide 15093026 15093625 . - . ID=GSCOCP00041201001;Dbxref=TrEMBL:B9I280,TrEMBL:B9S0T3,TrEMBL:G7K693;Derives_from=GSCOCT00041201001;Name=Cc01_g04610;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Auxin-induced protein 5NG4%2C putative,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00041201001~ Auxin-induced protein 5NG4%2C putative~ unknown_gene~ fragment;original_location=complement(join(1179920..1180110%2C1179511..1179595));owner=coffea | |
| 5553 chr1 manual_curation exon 15093026 15093110 . - . Parent=GSCOCT00041201001 | |
| 5554 chr1 manual_curation exon 15093435 15093869 . - . Parent=GSCOCT00041201001 | |
| 5555 chr1 manual_curation CDS 15093026 15093110 . - 2 Parent=GSCOCT00041201001 | |
| 5556 chr1 manual_curation CDS 15093435 15093625 . - 0 Parent=GSCOCT00041201001 | |
| 5557 chr1 manual_curation gene 15098323 15098691 . - . ID=GSCOCG00041202001;Name=Cc01_g04620 | |
| 5558 chr1 manual_curation mRNA 15098323 15098691 . - . ID=GSCOCT00041202001;Parent=GSCOCG00041202001;Name=Cc01_g04620 | |
| 5559 chr1 manual_curation polypeptide 15098323 15098691 . - . ID=GSCOCP00041202001;Dbxref=GENE3D:G3DSA:1.10.287.310,InterPro:IPR001854,PFAM:PF00831,SUPERFAMILY:SSF46561,SwissProt:O80626,SwissProt:Q9LZ41,SwissProt:Q9M5L0,TAIR:AT2G39390.1,TAIR:AT3G09500.1,TAIR:AT3G55170.1,TIGRFAMs:TIGR00012,TrEMBL:B9SYM9,TrEMBL:Q308A4,TrEMBL:Q53U38;Derives_from=GSCOCT00041202001;Name=Cc01_g04620;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:60S ribosomal protein L35,CC_functional_completeness:complete,CC_gene:RPL35,CC_gene:RPL35D,CC_gene:RPL35B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00041202001~ 60S ribosomal protein L35~ RPL35~ complete;original_location=complement(1184808..1185176);owner=coffea | |
| 5560 chr1 manual_curation exon 15098323 15098691 . - . Parent=GSCOCT00041202001 | |
| 5561 chr1 manual_curation CDS 15098323 15098691 . - 0 Parent=GSCOCT00041202001 | |
| 5562 chr1 manual_curation gene 15099826 15108242 . - . ID=GSCOCG00041203001;Name=Cc01_g04630 | |
| 5563 chr1 manual_curation mRNA 15099826 15108242 . - . ID=GSCOCT00041203001;Parent=GSCOCG00041203001;Name=Cc01_g04630 | |
| 5564 chr1 manual_curation polypeptide 15100203 15108192 . - . ID=GSCOCP00041203001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR001509,InterPro:IPR016040,PFAM:PF01370,SwissProt:P51103,SwissProt:P51104,SwissProt:P51105,TAIR:AT1G09510.1,TAIR:AT1G51410.1,TAIR:AT5G19440.1,TrEMBL:A6N6K7,TrEMBL:G7IYC1,TrEMBL:Q2KNL3;Derives_from=GSCOCT00041203001;Name=Cc01_g04630;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,GO:0044237,GO:0050662,CC_EC_number:1.1.1.219,PRODUCT:Putative Dihydroflavonol-4-reductase,CC_functional_completeness:complete,CC_gene:A,CC_gene:F,CC_gene:DFR;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00041203001~ Putative Dihydroflavonol-4-reductase~ A~ complete;original_location=complement(join(1194569..1194677%2C1193163..1193332%2C1191042..1191093%2C1190918..1190937%2C1190021..1190183%2C1188436..1188622%2C1186688..1186844));owner=coffea | |
| 5565 chr1 manual_curation exon 15099826 15100359 . - . Parent=GSCOCT00041203001 | |
| 5566 chr1 manual_curation exon 15101951 15102137 . - . Parent=GSCOCT00041203001 | |
| 5567 chr1 manual_curation exon 15103536 15103698 . - . Parent=GSCOCT00041203001 | |
| 5568 chr1 manual_curation exon 15104433 15104452 . - . Parent=GSCOCT00041203001 | |
| 5569 chr1 manual_curation exon 15104557 15104608 . - . Parent=GSCOCT00041203001 | |
| 5570 chr1 manual_curation exon 15106678 15106847 . - . Parent=GSCOCT00041203001 | |
| 5571 chr1 manual_curation exon 15108084 15108242 . - . Parent=GSCOCT00041203001 | |
| 5572 chr1 manual_curation CDS 15100203 15100359 . - 2 Parent=GSCOCT00041203001 | |
| 5573 chr1 manual_curation CDS 15101951 15102137 . - 1 Parent=GSCOCT00041203001 | |
| 5574 chr1 manual_curation CDS 15103536 15103698 . - 0 Parent=GSCOCT00041203001 | |
| 5575 chr1 manual_curation CDS 15104433 15104452 . - 1 Parent=GSCOCT00041203001 | |
| 5576 chr1 manual_curation CDS 15104557 15104608 . - 0 Parent=GSCOCT00041203001 | |
| 5577 chr1 manual_curation CDS 15106678 15106847 . - 1 Parent=GSCOCT00041203001 | |
| 5578 chr1 manual_curation CDS 15108084 15108192 . - 0 Parent=GSCOCT00041203001 | |
| 5579 chr1 manual_curation gene 15425026 15425955 . + . ID=GSCOCG00041208001;Name=Cc01_g04640 | |
| 5580 chr1 manual_curation mRNA 15425026 15425955 . + . ID=GSCOCT00041208001;Parent=GSCOCG00041208001;Name=Cc01_g04640 | |
| 5581 chr1 manual_curation polypeptide 15425026 15425955 . + . ID=GSCOCP00041208001;Dbxref=InterPro:IPR012862,PFAM:PF07795,TAIR:AT2G28140.1,TAIR:AT3G44940.1,TAIR:AT5G22930.1,TrEMBL:I1LL00,TrEMBL:I1LR87,TrEMBL:I1M4G8;Derives_from=GSCOCT00041208001;Name=Cc01_g04640;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of unknown function (DUF1635),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00041208001~ Putative Protein of unknown function (DUF1635)~ unknown_gene~ complete;original_location=join(1511511..1511564%2C1511652..1512440);owner=coffea | |
| 5582 chr1 manual_curation exon 15425026 15425079 . + . Parent=GSCOCT00041208001 | |
| 5583 chr1 manual_curation exon 15425167 15425955 . + . Parent=GSCOCT00041208001 | |
| 5584 chr1 manual_curation CDS 15425026 15425079 . + 0 Parent=GSCOCT00041208001 | |
| 5585 chr1 manual_curation CDS 15425167 15425955 . + 0 Parent=GSCOCT00041208001 | |
| 5586 chr1 manual_curation gene 15431267 15434919 . - . ID=GSCOCG00041209001;Name=Cc01_g04650 | |
| 5587 chr1 manual_curation mRNA 15431267 15434919 . - . ID=GSCOCT00041209001;Parent=GSCOCG00041209001;Name=Cc01_g04650 | |
| 5588 chr1 manual_curation polypeptide 15431267 15434919 . - . ID=GSCOCP00041209001;Dbxref=GENE3D:G3DSA:2.40.50.140,InterPro:IPR012309,InterPro:IPR012310,InterPro:IPR012340,InterPro:IPR016059,PFAM:PF01068,PFAM:PF04679,PROFILE:PS50160,PROSITE:PS00333,SwissProt:Q42572,SwissProt:Q869E1,SwissProt:Q9W1H4,TAIR:AT1G08130.1,TAIR:AT1G49250.1,TAIR:AT1G66730.1,TrEMBL:B9HQN9,TrEMBL:B9SCJ7,TrEMBL:F6GW85;Derives_from=GSCOCT00041209001;Name=Cc01_g04650;Ontology_term=CC_evidence_code:ISS,GO:0003910,GO:0005524,GO:0006260,GO:0006281,GO:0006310,CC_EC_number:6.5.1.1,PRODUCT:DNA ligase 1,CC_functional_completeness:fragment,CC_gene:LIG1,CC_gene:lig1,CC_gene:DNA-ligI;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00041209001~ DNA ligase 1~ LIG1~ fragment;original_location=complement(join(1521273..1521404%2C1520856..1520968%2C1520139..1520240%2C1519716..1519777%2C1519438..1519509%2C1519237..1519310%2C1519083..1519139%2C1518577..1518654%2C1517923..1518000%2C1517752..1517814));owner=coffea | |
| 5589 chr1 manual_curation exon 15431267 15431329 . - . Parent=GSCOCT00041209001 | |
| 5590 chr1 manual_curation exon 15431438 15431515 . - . Parent=GSCOCT00041209001 | |
| 5591 chr1 manual_curation exon 15432092 15432169 . - . Parent=GSCOCT00041209001 | |
| 5592 chr1 manual_curation exon 15432598 15432654 . - . Parent=GSCOCT00041209001 | |
| 5593 chr1 manual_curation exon 15432752 15432825 . - . Parent=GSCOCT00041209001 | |
| 5594 chr1 manual_curation exon 15432953 15433024 . - . Parent=GSCOCT00041209001 | |
| 5595 chr1 manual_curation exon 15433231 15433292 . - . Parent=GSCOCT00041209001 | |
| 5596 chr1 manual_curation exon 15433654 15433755 . - . Parent=GSCOCT00041209001 | |
| 5597 chr1 manual_curation exon 15434371 15434483 . - . Parent=GSCOCT00041209001 | |
| 5598 chr1 manual_curation exon 15434788 15434919 . - . Parent=GSCOCT00041209001 | |
| 5599 chr1 manual_curation CDS 15431267 15431329 . - 0 Parent=GSCOCT00041209001 | |
| 5600 chr1 manual_curation CDS 15431438 15431515 . - 0 Parent=GSCOCT00041209001 | |
| 5601 chr1 manual_curation CDS 15432092 15432169 . - 0 Parent=GSCOCT00041209001 | |
| 5602 chr1 manual_curation CDS 15432598 15432654 . - 0 Parent=GSCOCT00041209001 | |
| 5603 chr1 manual_curation CDS 15432752 15432825 . - 1 Parent=GSCOCT00041209001 | |
| 5604 chr1 manual_curation CDS 15432953 15433024 . - 1 Parent=GSCOCT00041209001 | |
| 5605 chr1 manual_curation CDS 15433231 15433292 . - 2 Parent=GSCOCT00041209001 | |
| 5606 chr1 manual_curation CDS 15433654 15433755 . - 2 Parent=GSCOCT00041209001 | |
| 5607 chr1 manual_curation CDS 15434371 15434483 . - 0 Parent=GSCOCT00041209001 | |
| 5608 chr1 manual_curation CDS 15434788 15434919 . - 0 Parent=GSCOCT00041209001 | |
| 5609 chr1 manual_curation gene 15543419 15548682 . + . ID=GSCOCG00015810001;Name=Cc01_g04660 | |
| 5610 chr1 manual_curation mRNA 15543419 15548682 . + . ID=GSCOCT00015810001;Parent=GSCOCG00015810001;Name=Cc01_g04660 | |
| 5611 chr1 manual_curation polypeptide 15543616 15548522 . + . ID=GSCOCP00015810001;Dbxref=GENE3D:G3DSA:1.10.10.10,InterPro:IPR001077,InterPro:IPR011991,InterPro:IPR012967,InterPro:IPR016461,PFAM:PF00891,PFAM:PF08100,PIR:PIRSF005739,SwissProt:Q00763,SwissProt:Q43046,SwissProt:Q43609,TAIR:AT1G33030.1,TAIR:AT1G77520.1,TAIR:AT5G54160.1,TrEMBL:D3JZ18,TrEMBL:Q42949,TrEMBL:Q8S3K6;Derives_from=GSCOCT00015810001;Name=Cc01_g04660;Ontology_term=CC_evidence_code:ISS,GO:0008168,GO:0008171,GO:0046983,CC_EC_number:2.1.1.68,PRODUCT:Caffeic acid 3-O-methyltransferase 1,CC_functional_completeness:complete,CC_gene:HOMT1,CC_gene:COMT1,CC_gene:OMT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015810001~ Caffeic acid 3-O-methyltransferase 1~ HOMT1~ complete;original_location=join(107995..108467%2C110237..110547%2C111991..112055%2C112605..112901);owner=coffea | |
| 5612 chr1 manual_curation exon 15543419 15544088 . + . Parent=GSCOCT00015810001 | |
| 5613 chr1 manual_curation exon 15545858 15546168 . + . Parent=GSCOCT00015810001 | |
| 5614 chr1 manual_curation exon 15547612 15547676 . + . Parent=GSCOCT00015810001 | |
| 5615 chr1 manual_curation exon 15548226 15548682 . + . Parent=GSCOCT00015810001 | |
| 5616 chr1 manual_curation CDS 15543616 15544088 . + 0 Parent=GSCOCT00015810001 | |
| 5617 chr1 manual_curation CDS 15545858 15546168 . + 2 Parent=GSCOCT00015810001 | |
| 5618 chr1 manual_curation CDS 15547612 15547676 . + 1 Parent=GSCOCT00015810001 | |
| 5619 chr1 manual_curation CDS 15548226 15548522 . + 0 Parent=GSCOCT00015810001 | |
| 5620 chr1 manual_curation gene 15648290 15649775 . + . ID=GSCOCG00015814001;Name=Cc01_g04670 | |
| 5621 chr1 manual_curation mRNA 15648290 15649775 . + . ID=GSCOCT00015814001;Parent=GSCOCG00015814001;Name=Cc01_g04670 | |
| 5622 chr1 manual_curation polypeptide 15648934 15649775 . + . ID=GSCOCP00015814001;Derives_from=GSCOCT00015814001;Name=Cc01_g04670;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.1.1.76,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015814001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(213313..213518%2C214064..214154);owner=coffea | |
| 5623 chr1 manual_curation exon 15648290 15649139 . + . Parent=GSCOCT00015814001 | |
| 5624 chr1 manual_curation exon 15649685 15649775 . + . Parent=GSCOCT00015814001 | |
| 5625 chr1 manual_curation CDS 15648934 15649139 . + 0 Parent=GSCOCT00015814001 | |
| 5626 chr1 manual_curation CDS 15649685 15649775 . + 2 Parent=GSCOCT00015814001 | |
| 5627 chr1 manual_curation gene 15650414 15653379 . + . ID=GSCOCG00015815001;Name=Cc01_g04680 | |
| 5628 chr1 manual_curation mRNA 15650414 15653379 . + . ID=GSCOCT00015815001;Parent=GSCOCG00015815001;Name=Cc01_g04680 | |
| 5629 chr1 manual_curation polypeptide 15650477 15653012 . + . ID=GSCOCP00015815001;Dbxref=InterPro:IPR001077,PFAM:PF00891,SwissProt:O23760,SwissProt:Q00763,SwissProt:Q43046,TAIR:AT1G33030.1,TAIR:AT1G77520.1,TAIR:AT5G54160.1,TrEMBL:Q2HTB5,TrEMBL:Q42949,TrEMBL:Q8S3K6;Derives_from=GSCOCT00015815001;Name=Cc01_g04680;Ontology_term=CC_evidence_code:ISS,GO:0008171,CC_EC_number:2.1.1.68,PRODUCT:Caffeic acid 3-O-methyltransferase,CC_functional_completeness:fragment,CC_gene:COMT,CC_gene:HOMT1,CC_gene:OMT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015815001~ Caffeic acid 3-O-methyltransferase~ COMT~ fragment;original_location=join(214856..214887%2C215096..215406%2C216316..216380%2C217095..217391);owner=coffea | |
| 5630 chr1 manual_curation exon 15650414 15650508 . + . Parent=GSCOCT00015815001 | |
| 5631 chr1 manual_curation exon 15650717 15651027 . + . Parent=GSCOCT00015815001 | |
| 5632 chr1 manual_curation exon 15651937 15652001 . + . Parent=GSCOCT00015815001 | |
| 5633 chr1 manual_curation exon 15652716 15653379 . + . Parent=GSCOCT00015815001 | |
| 5634 chr1 manual_curation CDS 15650477 15650508 . + 0 Parent=GSCOCT00015815001 | |
| 5635 chr1 manual_curation CDS 15650717 15651027 . + 2 Parent=GSCOCT00015815001 | |
| 5636 chr1 manual_curation CDS 15651937 15652001 . + 1 Parent=GSCOCT00015815001 | |
| 5637 chr1 manual_curation CDS 15652716 15653012 . + 0 Parent=GSCOCT00015815001 | |
| 5638 chr1 manual_curation gene 15653607 15661932 . - . ID=GSCOCG00015816001;Name=Cc01_g04690 | |
| 5639 chr1 manual_curation mRNA 15653607 15661932 . - . ID=GSCOCT00015816001;Parent=GSCOCG00015816001;Name=Cc01_g04690 | |
| 5640 chr1 manual_curation polypeptide 15653867 15661341 . - . ID=GSCOCP00015816001;Dbxref=InterPro:IPR012878,PFAM:PF07944,TAIR:AT5G12950.1,TAIR:AT5G12960.1,TrEMBL:B9GM82,TrEMBL:B9GW92,TrEMBL:F6GU88;Derives_from=GSCOCT00015816001;Name=Cc01_g04690;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative glycosyl hydrolase of unknown function (DUF1680),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015816001~ Putative glycosyl hydrolase of unknown function (DUF1680)~ unknown_gene~ complete;original_location=complement(join(225183..225720%2C224383..224585%2C224101..224298%2C223621..223692%2C222545..222640%2C221902..221981%2C221658..221733%2C221178..221388%2C220651..220844%2C219412..219520%2C219122..219211%2C218246..218988));owner=coffea | |
| 5641 chr1 manual_curation exon 15653607 15654609 . - . Parent=GSCOCT00015816001 | |
| 5642 chr1 manual_curation exon 15654743 15654832 . - . Parent=GSCOCT00015816001 | |
| 5643 chr1 manual_curation exon 15655033 15655141 . - . Parent=GSCOCT00015816001 | |
| 5644 chr1 manual_curation exon 15656272 15656465 . - . Parent=GSCOCT00015816001 | |
| 5645 chr1 manual_curation exon 15656799 15657009 . - . Parent=GSCOCT00015816001 | |
| 5646 chr1 manual_curation exon 15657279 15657354 . - . Parent=GSCOCT00015816001 | |
| 5647 chr1 manual_curation exon 15657523 15657602 . - . Parent=GSCOCT00015816001 | |
| 5648 chr1 manual_curation exon 15658166 15658261 . - . Parent=GSCOCT00015816001 | |
| 5649 chr1 manual_curation exon 15659242 15659313 . - . Parent=GSCOCT00015816001 | |
| 5650 chr1 manual_curation exon 15659722 15659919 . - . Parent=GSCOCT00015816001 | |
| 5651 chr1 manual_curation exon 15660004 15660206 . - . Parent=GSCOCT00015816001 | |
| 5652 chr1 manual_curation exon 15660804 15661932 . - . Parent=GSCOCT00015816001 | |
| 5653 chr1 manual_curation CDS 15653867 15654609 . - 1 Parent=GSCOCT00015816001 | |
| 5654 chr1 manual_curation CDS 15654743 15654832 . - 1 Parent=GSCOCT00015816001 | |
| 5655 chr1 manual_curation CDS 15655033 15655141 . - 0 Parent=GSCOCT00015816001 | |
| 5656 chr1 manual_curation CDS 15656272 15656465 . - 1 Parent=GSCOCT00015816001 | |
| 5657 chr1 manual_curation CDS 15656799 15657009 . - 0 Parent=GSCOCT00015816001 | |
| 5658 chr1 manual_curation CDS 15657279 15657354 . - 2 Parent=GSCOCT00015816001 | |
| 5659 chr1 manual_curation CDS 15657523 15657602 . - 0 Parent=GSCOCT00015816001 | |
| 5660 chr1 manual_curation CDS 15658166 15658261 . - 0 Parent=GSCOCT00015816001 | |
| 5661 chr1 manual_curation CDS 15659242 15659313 . - 0 Parent=GSCOCT00015816001 | |
| 5662 chr1 manual_curation CDS 15659722 15659919 . - 0 Parent=GSCOCT00015816001 | |
| 5663 chr1 manual_curation CDS 15660004 15660206 . - 1 Parent=GSCOCT00015816001 | |
| 5664 chr1 manual_curation CDS 15660804 15661341 . - 0 Parent=GSCOCT00015816001 | |
| 5665 chr1 manual_curation gene 15670148 15677070 . - . ID=GSCOCG00015818001;Name=Cc01_g04700 | |
| 5666 chr1 manual_curation mRNA 15670148 15677070 . - . ID=GSCOCT00015818001;Parent=GSCOCG00015818001;Name=Cc01_g04700 | |
| 5667 chr1 manual_curation polypeptide 15670328 15675881 . - . ID=GSCOCP00015818001;Dbxref=GENE3D:G3DSA:1.25.40.180,InterPro:IPR003890,InterPro:IPR003891,InterPro:IPR016021,InterPro:IPR016024,PFAM:PF02847,PFAM:PF02854,PROFILE:PS51366,SMART:SM00543,SMART:SM00544,SUPERFAMILY:SSF48371,SwissProt:P0CM97,SwissProt:Q5ZKA3,SwissProt:Q9HCG8,TAIR:AT1G52325.1,TAIR:AT1G80930.1,TAIR:AT5G17930.1,TrEMBL:A2ZJG3,TrEMBL:B9IGD9,TrEMBL:D7KWL9,TrEMBL:Q2QUQ9,TrEMBL:Q9SAG7;Derives_from=GSCOCT00015818001;Name=Cc01_g04700;Ontology_term=CC_evidence_code:ISS,GO:0005488,GO:0005515,GO:0016070,CC_EC_number:missing_EC_number,PRODUCT:Pre-mRNA-splicing factor CWC22 homolog,CC_functional_completeness:fragment,CC_gene:CWC22;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015818001~ Pre-mRNA-splicing factor CWC22 homolog~ CWC22~ fragment;original_location=complement(join(239979..240260%2C239680..239869%2C239081..239184%2C238869..238971%2C238489..238787%2C235374..235679%2C234707..235060));owner=coffea | |
| 5668 chr1 manual_curation exon 15670148 15670681 . - . Parent=GSCOCT00015818001 | |
| 5669 chr1 manual_curation exon 15670995 15671300 . - . Parent=GSCOCT00015818001 | |
| 5670 chr1 manual_curation exon 15674110 15674408 . - . Parent=GSCOCT00015818001 | |
| 5671 chr1 manual_curation exon 15674490 15674592 . - . Parent=GSCOCT00015818001 | |
| 5672 chr1 manual_curation exon 15674702 15674805 . - . Parent=GSCOCT00015818001 | |
| 5673 chr1 manual_curation exon 15675301 15675490 . - . Parent=GSCOCT00015818001 | |
| 5674 chr1 manual_curation exon 15675600 15677070 . - . Parent=GSCOCT00015818001 | |
| 5675 chr1 manual_curation CDS 15670328 15670681 . - 0 Parent=GSCOCT00015818001 | |
| 5676 chr1 manual_curation CDS 15670995 15671300 . - 0 Parent=GSCOCT00015818001 | |
| 5677 chr1 manual_curation CDS 15674110 15674408 . - 1 Parent=GSCOCT00015818001 | |
| 5678 chr1 manual_curation CDS 15674490 15674592 . - 0 Parent=GSCOCT00015818001 | |
| 5679 chr1 manual_curation CDS 15674702 15674805 . - 1 Parent=GSCOCT00015818001 | |
| 5680 chr1 manual_curation CDS 15675301 15675490 . - 0 Parent=GSCOCT00015818001 | |
| 5681 chr1 manual_curation CDS 15675600 15675881 . - 0 Parent=GSCOCT00015818001 | |
| 5682 chr1 manual_curation gene 16017855 16022122 . + . ID=GSCOCG00015821001;Name=Cc01_g04710 | |
| 5683 chr1 manual_curation mRNA 16017855 16022122 . + . ID=GSCOCT00015821001;Parent=GSCOCG00015821001;Name=Cc01_g04710 | |
| 5684 chr1 manual_curation polypeptide 16017855 16021468 . + . ID=GSCOCP00015821001;Derives_from=GSCOCT00015821001;Name=Cc01_g04710;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015821001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(582234..582295%2C582785..582852%2C583173..583272%2C585730..585847);owner=coffea | |
| 5685 chr1 manual_curation exon 16017855 16017916 . + . Parent=GSCOCT00015821001 | |
| 5686 chr1 manual_curation exon 16018406 16018473 . + . Parent=GSCOCT00015821001 | |
| 5687 chr1 manual_curation exon 16018794 16018893 . + . Parent=GSCOCT00015821001 | |
| 5688 chr1 manual_curation exon 16021351 16022122 . + . Parent=GSCOCT00015821001 | |
| 5689 chr1 manual_curation CDS 16017855 16017916 . + 0 Parent=GSCOCT00015821001 | |
| 5690 chr1 manual_curation CDS 16018406 16018473 . + 2 Parent=GSCOCT00015821001 | |
| 5691 chr1 manual_curation CDS 16018794 16018893 . + 1 Parent=GSCOCT00015821001 | |
| 5692 chr1 manual_curation CDS 16021351 16021468 . + 2 Parent=GSCOCT00015821001 | |
| 5693 chr1 manual_curation gene 16093506 16094654 . + . ID=GSCOCG00015822001;Name=Cc01_g04720 | |
| 5694 chr1 manual_curation mRNA 16093506 16094654 . + . ID=GSCOCT00015822001;Parent=GSCOCG00015822001;Name=Cc01_g04720 | |
| 5695 chr1 manual_curation polypeptide 16093563 16094654 . + . ID=GSCOCP00015822001;Dbxref=InterPro:IPR001611,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SwissProt:Q00874,SwissProt:Q8VZG8,SwissProt:Q9FL28,TAIR:AT3G12610.1,TAIR:AT3G20820.1,TAIR:AT5G12940.1,TrEMBL:C6ZS03,TrEMBL:D2CFI9,TrEMBL:F6GU89;Derives_from=GSCOCT00015822001;Name=Cc01_g04720;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:DNA-damage-repair/toleration protein DRT100,CC_functional_completeness:complete,CC_gene:DRT100,CC_gene:At4g08850,CC_gene:FLS2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015822001~ DNA-damage-repair/toleration protein DRT100~ DRT100~ complete;original_location=657942..659033;owner=coffea | |
| 5696 chr1 manual_curation exon 16093506 16094654 . + . Parent=GSCOCT00015822001 | |
| 5697 chr1 manual_curation CDS 16093563 16094654 . + 0 Parent=GSCOCT00015822001 | |
| 5698 chr1 manual_curation gene 16212673 16213764 . + . ID=GSCOCG00015823001;Name=Cc01_g04730 | |
| 5699 chr1 manual_curation mRNA 16212673 16213764 . + . ID=GSCOCT00015823001;Parent=GSCOCG00015823001;Name=Cc01_g04730 | |
| 5700 chr1 manual_curation polypeptide 16212673 16213764 . + . ID=GSCOCP00015823001;Dbxref=InterPro:IPR001611,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SwissProt:Q00874,SwissProt:Q8VZG8,SwissProt:Q9FL28,TAIR:AT3G12610.1,TAIR:AT3G20820.1,TAIR:AT5G12940.1,TrEMBL:D2CFI9,TrEMBL:E4MVJ5,TrEMBL:F6GU89;Derives_from=GSCOCT00015823001;Name=Cc01_g04730;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:DNA-damage-repair/toleration protein DRT100,CC_functional_completeness:complete,CC_gene:DRT100,CC_gene:At4g08850,CC_gene:FLS2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015823001~ DNA-damage-repair/toleration protein DRT100~ DRT100~ complete;original_location=777052..778143;owner=coffea | |
| 5701 chr1 manual_curation exon 16212673 16213764 . + . Parent=GSCOCT00015823001 | |
| 5702 chr1 manual_curation CDS 16212673 16213764 . + 0 Parent=GSCOCT00015823001 | |
| 5703 chr1 manual_curation gene 16555894 16557150 . - . ID=GSCOCG00015825001;Name=Cc01_g04740 | |
| 5704 chr1 manual_curation mRNA 16555894 16557150 . - . ID=GSCOCT00015825001;Parent=GSCOCG00015825001;Name=Cc01_g04740 | |
| 5705 chr1 manual_curation polypeptide 16555894 16557150 . - . ID=GSCOCP00015825001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:P93025,SwissProt:Q9LFA2,SwissProt:Q9LSF1,TAIR:AT1G51170.1,TAIR:AT3G20830.1,TAIR:AT4G13000.1,TrEMBL:A5BFN3,TrEMBL:B9GW94,TrEMBL:F6GU87;Derives_from=GSCOCT00015825001;Name=Cc01_g04740;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.1,PRODUCT:Putative Serine/threonine-protein kinase OXI1,CC_functional_completeness:complete,CC_gene:OXI1,CC_gene:KIPK,CC_gene:PHOT2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015825001~ Putative Serine/threonine-protein kinase OXI1~ OXI1~ complete;original_location=complement(1120273..1121529);owner=coffea | |
| 5706 chr1 manual_curation exon 16555894 16557150 . - . Parent=GSCOCT00015825001 | |
| 5707 chr1 manual_curation CDS 16555894 16557150 . - 0 Parent=GSCOCT00015825001 | |
| 5708 chr1 manual_curation gene 16702937 16714971 . - . ID=GSCOCG00028515001;Name=Cc01_g04750 | |
| 5709 chr1 manual_curation mRNA 16702937 16714971 . - . ID=GSCOCT00028515001;Parent=GSCOCG00028515001;Name=Cc01_g04750 | |
| 5710 chr1 manual_curation polypeptide 16703055 16714744 . - . ID=GSCOCP00028515001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR001509,InterPro:IPR016040,PFAM:PF01370,SwissProt:P51104,SwissProt:P51110,SwissProt:Q9XES5,TAIR:AT1G09510.1,TAIR:AT1G51410.1,TAIR:AT5G19440.1,TrEMBL:O65152,TrEMBL:Q2KNL3,TrEMBL:Q2Z1Z0;Derives_from=GSCOCT00028515001;Name=Cc01_g04750;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,GO:0044237,GO:0050662,CC_EC_number:1.1.1.219,PRODUCT:Putative Dihydroflavonol-4-reductase,CC_functional_completeness:complete,CC_gene:A,CC_gene:DFR;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028515001~ Putative Dihydroflavonol-4-reductase~ A~ complete;original_location=complement(join(11784..11889%2C9540..9709%2C6938..7129%2C3653..3815%2C2084..2270%2C200..356));owner=coffea | |
| 5711 chr1 manual_curation exon 16702937 16703211 . - . Parent=GSCOCT00028515001 | |
| 5712 chr1 manual_curation exon 16704939 16705125 . - . Parent=GSCOCT00028515001 | |
| 5713 chr1 manual_curation exon 16706508 16706670 . - . Parent=GSCOCT00028515001 | |
| 5714 chr1 manual_curation exon 16709793 16709984 . - . Parent=GSCOCT00028515001 | |
| 5715 chr1 manual_curation exon 16712395 16712564 . - . Parent=GSCOCT00028515001 | |
| 5716 chr1 manual_curation exon 16714639 16714971 . - . Parent=GSCOCT00028515001 | |
| 5717 chr1 manual_curation CDS 16703055 16703211 . - 2 Parent=GSCOCT00028515001 | |
| 5718 chr1 manual_curation CDS 16704939 16705125 . - 1 Parent=GSCOCT00028515001 | |
| 5719 chr1 manual_curation CDS 16706508 16706670 . - 0 Parent=GSCOCT00028515001 | |
| 5720 chr1 manual_curation CDS 16709793 16709984 . - 0 Parent=GSCOCT00028515001 | |
| 5721 chr1 manual_curation CDS 16712395 16712564 . - 1 Parent=GSCOCT00028515001 | |
| 5722 chr1 manual_curation CDS 16714639 16714744 . - 0 Parent=GSCOCT00028515001 | |
| 5723 chr1 manual_curation gene 16804952 16814960 . - . ID=GSCOCG00028517001;Name=Cc01_g04760 | |
| 5724 chr1 manual_curation mRNA 16804952 16814960 . - . ID=GSCOCT00028517001;Parent=GSCOCG00028517001;Name=Cc01_g04760 | |
| 5725 chr1 manual_curation polypeptide 16805300 16814848 . - . ID=GSCOCP00028517001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR001509,InterPro:IPR016040,PFAM:PF01370,SwissProt:P51103,SwissProt:P51104,SwissProt:Q9XES5,TAIR:AT1G09510.1,TAIR:AT1G51410.1,TAIR:AT5G19440.1,TrEMBL:B1B610,TrEMBL:O65152,TrEMBL:Q2Z1Z0;Derives_from=GSCOCT00028517001;Name=Cc01_g04760;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,GO:0044237,GO:0050662,CC_EC_number:1.1.1.219,PRODUCT:Putative Dihydroflavonol-4-reductase,CC_functional_completeness:complete,CC_gene:A,CC_gene:F,CC_gene:DFR;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028517001~ Putative Dihydroflavonol-4-reductase~ A~ complete;original_location=complement(join(111888..111993%2C110946..111112%2C108072..108263%2C105945..106107%2C104114..104300%2C102445..102601));owner=coffea | |
| 5726 chr1 manual_curation exon 16804952 16805456 . - . Parent=GSCOCT00028517001 | |
| 5727 chr1 manual_curation exon 16806969 16807155 . - . Parent=GSCOCT00028517001 | |
| 5728 chr1 manual_curation exon 16808800 16808962 . - . Parent=GSCOCT00028517001 | |
| 5729 chr1 manual_curation exon 16810927 16811118 . - . Parent=GSCOCT00028517001 | |
| 5730 chr1 manual_curation exon 16813801 16813967 . - . Parent=GSCOCT00028517001 | |
| 5731 chr1 manual_curation exon 16814743 16814960 . - . Parent=GSCOCT00028517001 | |
| 5732 chr1 manual_curation CDS 16805300 16805456 . - 2 Parent=GSCOCT00028517001 | |
| 5733 chr1 manual_curation CDS 16806969 16807155 . - 1 Parent=GSCOCT00028517001 | |
| 5734 chr1 manual_curation CDS 16808800 16808962 . - 0 Parent=GSCOCT00028517001 | |
| 5735 chr1 manual_curation CDS 16810927 16811118 . - 0 Parent=GSCOCT00028517001 | |
| 5736 chr1 manual_curation CDS 16813801 16813967 . - 1 Parent=GSCOCT00028517001 | |
| 5737 chr1 manual_curation CDS 16814743 16814848 . - 0 Parent=GSCOCT00028517001 | |
| 5738 chr1 manual_curation gene 16959195 16962107 . - . ID=GSCOCG00028524001;Name=Cc01_g04770 | |
| 5739 chr1 manual_curation mRNA 16959195 16962107 . - . ID=GSCOCT00028524001;Parent=GSCOCG00028524001;Name=Cc01_g04770 | |
| 5740 chr1 manual_curation polypeptide 16959195 16962107 . - . ID=GSCOCP00028524001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017442,PFAM:PF00069,PFAM:PF07714,PROFILE:PS50011,PROSITE:PS00108,SUPERFAMILY:SSF56112,SwissProt:Q9FLW0,SwissProt:Q9LK35,SwissProt:Q9LX66,TAIR:AT3G46290.1,TAIR:AT5G24010.1,TAIR:AT5G54380.1,TrEMBL:B9MX06,TrEMBL:B9SB01,TrEMBL:F6H6D3;Derives_from=GSCOCT00028524001;Name=Cc01_g04770;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:At5g24010,CC_gene:THE1,CC_gene:HERK1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028524001~ Hypothetical protein~ At5g24010~ missing_functional_completeness;original_location=complement(join(259107..259252%2C257643..257796%2C257500..257579%2C256340..256400));owner=coffea | |
| 5741 chr1 manual_curation exon 16959195 16959255 . - . Parent=GSCOCT00028524001 | |
| 5742 chr1 manual_curation exon 16960355 16960434 . - . Parent=GSCOCT00028524001 | |
| 5743 chr1 manual_curation exon 16960498 16960651 . - . Parent=GSCOCT00028524001 | |
| 5744 chr1 manual_curation exon 16961962 16962107 . - . Parent=GSCOCT00028524001 | |
| 5745 chr1 manual_curation CDS 16959195 16959255 . - 2 Parent=GSCOCT00028524001 | |
| 5746 chr1 manual_curation CDS 16960355 16960434 . - 0 Parent=GSCOCT00028524001 | |
| 5747 chr1 manual_curation CDS 16960498 16960651 . - 2 Parent=GSCOCT00028524001 | |
| 5748 chr1 manual_curation CDS 16961962 16962107 . - 0 Parent=GSCOCT00028524001 | |
| 5749 chr1 manual_curation gene 16990203 16991711 . - . ID=GSCOCG00028526001;Name=Cc01_g04780 | |
| 5750 chr1 manual_curation mRNA 16990203 16991711 . - . ID=GSCOCT00028526001;Parent=GSCOCG00028526001;Name=Cc01_g04780 | |
| 5751 chr1 manual_curation polypeptide 16990203 16991711 . - . ID=GSCOCP00028526001;Dbxref=InterPro:IPR002921,PFAM:PF01764,SwissProt:Q3EBR6,SwissProt:Q941F1,SwissProt:Q9C8J6,TAIR:AT1G06800.1,TAIR:AT1G51440.1,TAIR:AT2G30550.2,TrEMBL:A5BH37,TrEMBL:B9HNY1,TrEMBL:F6GU34;Derives_from=GSCOCT00028526001;Name=Cc01_g04780;Ontology_term=CC_evidence_code:ISS,GO:0004806,GO:0006629,CC_EC_number:missing_EC_number,PRODUCT:Phospholipase A1-Igamma3%2C chloroplastic,CC_functional_completeness:complete,CC_gene:At1g51440,CC_gene:At2g30550,CC_gene:At1g06800;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028526001~ Phospholipase A1-Igamma3%2C chloroplastic~ At1g51440~ complete;original_location=complement(287348..288856);owner=coffea | |
| 5752 chr1 manual_curation exon 16990203 16991711 . - . Parent=GSCOCT00028526001 | |
| 5753 chr1 manual_curation CDS 16990203 16991711 . - 0 Parent=GSCOCT00028526001 | |
| 5754 chr1 manual_curation gene 17148319 17151279 . + . ID=GSCOCG00028530001;Name=Cc01_g04790 | |
| 5755 chr1 manual_curation mRNA 17148319 17151279 . + . ID=GSCOCT00028530001;Parent=GSCOCG00028530001;Name=Cc01_g04790 | |
| 5756 chr1 manual_curation polypeptide 17148319 17151279 . + . ID=GSCOCP00028530001;Dbxref=TAIR:AT3G26380.1,TrEMBL:G7J357,TrEMBL:I1K4F3,TrEMBL:I1LNG1;Derives_from=GSCOCT00028530001;Name=Cc01_g04790;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028530001~ Uncharacterized protein~ unknown_gene~ fragment;original_location=join(445464..445532%2C445710..445763%2C446170..446357%2C446414..446495%2C448311..448424);owner=coffea | |
| 5757 chr1 manual_curation exon 17148319 17148387 . + . Parent=GSCOCT00028530001 | |
| 5758 chr1 manual_curation exon 17148565 17148618 . + . Parent=GSCOCT00028530001 | |
| 5759 chr1 manual_curation exon 17149025 17149212 . + . Parent=GSCOCT00028530001 | |
| 5760 chr1 manual_curation exon 17149269 17149350 . + . Parent=GSCOCT00028530001 | |
| 5761 chr1 manual_curation exon 17151166 17151279 . + . Parent=GSCOCT00028530001 | |
| 5762 chr1 manual_curation CDS 17148319 17148387 . + 0 Parent=GSCOCT00028530001 | |
| 5763 chr1 manual_curation CDS 17148565 17148618 . + 0 Parent=GSCOCT00028530001 | |
| 5764 chr1 manual_curation CDS 17149025 17149212 . + 0 Parent=GSCOCT00028530001 | |
| 5765 chr1 manual_curation CDS 17149269 17149350 . + 2 Parent=GSCOCT00028530001 | |
| 5766 chr1 manual_curation CDS 17151166 17151279 . + 0 Parent=GSCOCT00028530001 | |
| 5767 chr1 manual_curation gene 17151347 17151870 . + . ID=GSCOCG00028531001;Name=Cc01_g04800 | |
| 5768 chr1 manual_curation mRNA 17151347 17151870 . + . ID=GSCOCT00028531001;Parent=GSCOCG00028531001;Name=Cc01_g04800 | |
| 5769 chr1 manual_curation polypeptide 17151347 17151870 . + . ID=GSCOCP00028531001;Derives_from=GSCOCT00028531001;Name=Cc01_g04800;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028531001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(448492..448533%2C448805..448853%2C448927..449015);owner=coffea | |
| 5770 chr1 manual_curation exon 17151347 17151388 . + . Parent=GSCOCT00028531001 | |
| 5771 chr1 manual_curation exon 17151660 17151708 . + . Parent=GSCOCT00028531001 | |
| 5772 chr1 manual_curation exon 17151782 17151870 . + . Parent=GSCOCT00028531001 | |
| 5773 chr1 manual_curation CDS 17151347 17151388 . + 0 Parent=GSCOCT00028531001 | |
| 5774 chr1 manual_curation CDS 17151660 17151708 . + 0 Parent=GSCOCT00028531001 | |
| 5775 chr1 manual_curation CDS 17151782 17151870 . + 1 Parent=GSCOCT00028531001 | |
| 5776 chr1 manual_curation gene 17182322 17189361 . + . ID=GSCOCG00028534001;Name=Cc01_g04810 | |
| 5777 chr1 manual_curation mRNA 17182322 17189361 . + . ID=GSCOCT00028534001;Parent=GSCOCG00028534001;Name=Cc01_g04810 | |
| 5778 chr1 manual_curation polypeptide 17183140 17188940 . + . ID=GSCOCP00028534001;Dbxref=InterPro:IPR021825,PFAM:PF11891,TAIR:AT2G40400.1,TAIR:AT3G56140.1,TAIR:AT5G12470.1,TrEMBL:B9RIE6,TrEMBL:E5GBT0,TrEMBL:F6GU33;Derives_from=GSCOCT00028534001;Name=Cc01_g04810;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF3411),CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028534001~ Protein of unknown function (DUF3411)~ unknown_gene~ fragment;original_location=join(480285..480314%2C482049..482117%2C482696..482827%2C482920..482973%2C483061..483105%2C484536..484669%2C485811..485936%2C486028..486085);owner=coffea | |
| 5779 chr1 manual_curation exon 17182322 17183169 . + . Parent=GSCOCT00028534001 | |
| 5780 chr1 manual_curation exon 17184904 17184972 . + . Parent=GSCOCT00028534001 | |
| 5781 chr1 manual_curation exon 17185551 17185682 . + . Parent=GSCOCT00028534001 | |
| 5782 chr1 manual_curation exon 17185775 17185828 . + . Parent=GSCOCT00028534001 | |
| 5783 chr1 manual_curation exon 17185916 17185960 . + . Parent=GSCOCT00028534001 | |
| 5784 chr1 manual_curation exon 17187391 17187524 . + . Parent=GSCOCT00028534001 | |
| 5785 chr1 manual_curation exon 17188666 17188791 . + . Parent=GSCOCT00028534001 | |
| 5786 chr1 manual_curation exon 17188883 17189361 . + . Parent=GSCOCT00028534001 | |
| 5787 chr1 manual_curation CDS 17183140 17183169 . + 0 Parent=GSCOCT00028534001 | |
| 5788 chr1 manual_curation CDS 17184904 17184972 . + 0 Parent=GSCOCT00028534001 | |
| 5789 chr1 manual_curation CDS 17185551 17185682 . + 0 Parent=GSCOCT00028534001 | |
| 5790 chr1 manual_curation CDS 17185775 17185828 . + 0 Parent=GSCOCT00028534001 | |
| 5791 chr1 manual_curation CDS 17185916 17185960 . + 0 Parent=GSCOCT00028534001 | |
| 5792 chr1 manual_curation CDS 17187391 17187524 . + 0 Parent=GSCOCT00028534001 | |
| 5793 chr1 manual_curation CDS 17188666 17188791 . + 2 Parent=GSCOCT00028534001 | |
| 5794 chr1 manual_curation CDS 17188883 17188940 . + 2 Parent=GSCOCT00028534001 | |
| 5795 chr1 manual_curation gene 17350029 17352002 . - . ID=GSCOCG00028544001;Name=Cc01_g04820 | |
| 5796 chr1 manual_curation mRNA 17350029 17352002 . - . ID=GSCOCT00028544001;Parent=GSCOCG00028544001;Name=Cc01_g04820 | |
| 5797 chr1 manual_curation polypeptide 17350029 17352002 . - . ID=GSCOCP00028544001;Dbxref=InterPro:IPR006740,PFAM:PF04646,TAIR:AT2G37730.1,TAIR:AT4G15240.1,TAIR:AT5G12460.1,TrEMBL:A5B465,TrEMBL:B9HNY4,TrEMBL:D7SKA5;Derives_from=GSCOCT00028544001;Name=Cc01_g04820;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of unknown function (DUF604),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028544001~ Putative Protein of unknown function (DUF604)~ unknown_gene~ complete;original_location=complement(join(648428..649147%2C647174..647755));owner=coffea | |
| 5798 chr1 manual_curation exon 17350029 17350610 . - . Parent=GSCOCT00028544001 | |
| 5799 chr1 manual_curation exon 17351283 17352002 . - . Parent=GSCOCT00028544001 | |
| 5800 chr1 manual_curation CDS 17350029 17350610 . - 0 Parent=GSCOCT00028544001 | |
| 5801 chr1 manual_curation CDS 17351283 17352002 . - 0 Parent=GSCOCT00028544001 | |
| 5802 chr1 manual_curation gene 17468932 17469361 . - . ID=GSCOCG00028547001;Name=Cc01_g04830 | |
| 5803 chr1 manual_curation mRNA 17468932 17469361 . - . ID=GSCOCT00028547001;Parent=GSCOCG00028547001;Name=Cc01_g04830 | |
| 5804 chr1 manual_curation polypeptide 17468932 17469361 . - . ID=GSCOCP00028547001;Derives_from=GSCOCT00028547001;Name=Cc01_g04830;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028547001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(766352..766506%2C766077..766122));owner=coffea | |
| 5805 chr1 manual_curation exon 17468932 17468977 . - . Parent=GSCOCT00028547001 | |
| 5806 chr1 manual_curation exon 17469207 17469361 . - . Parent=GSCOCT00028547001 | |
| 5807 chr1 manual_curation CDS 17468932 17468977 . - 2 Parent=GSCOCT00028547001 | |
| 5808 chr1 manual_curation CDS 17469207 17469361 . - 0 Parent=GSCOCT00028547001 | |
| 5809 chr1 manual_curation gene 17471192 17472766 . - . ID=GSCOCG00028548001;Name=Cc01_g04840 | |
| 5810 chr1 manual_curation mRNA 17471192 17472766 . - . ID=GSCOCT00028548001;Parent=GSCOCG00028548001;Name=Cc01_g04840 | |
| 5811 chr1 manual_curation polypeptide 17471192 17472766 . - . ID=GSCOCP00028548001;Dbxref=InterPro:IPR006740,PFAM:PF04646,TAIR:AT2G37730.1,TAIR:AT4G00300.1,TAIR:AT5G12460.1,TrEMBL:A5B465,TrEMBL:B9HNY4,TrEMBL:D7SKA5;Derives_from=GSCOCT00028548001;Name=Cc01_g04840;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of unknown function (DUF604),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028548001~ Putative Protein of unknown function (DUF604)~ unknown_gene~ complete;original_location=complement(join(769075..769911%2C768337..768885));owner=coffea | |
| 5812 chr1 manual_curation exon 17471192 17471740 . - . Parent=GSCOCT00028548001 | |
| 5813 chr1 manual_curation exon 17471930 17472766 . - . Parent=GSCOCT00028548001 | |
| 5814 chr1 manual_curation CDS 17471192 17471740 . - 0 Parent=GSCOCT00028548001 | |
| 5815 chr1 manual_curation CDS 17471930 17472766 . - 0 Parent=GSCOCT00028548001 | |
| 5816 chr1 manual_curation gene 17481969 17484253 . - . ID=GSCOCG00028549001;Name=Cc01_g04850 | |
| 5817 chr1 manual_curation mRNA 17481969 17484253 . - . ID=GSCOCT00028549001;Parent=GSCOCG00028549001;Name=Cc01_g04850 | |
| 5818 chr1 manual_curation polypeptide 17481969 17484253 . - . ID=GSCOCP00028549001;Dbxref=InterPro:IPR006740,PFAM:PF04646,TAIR:AT2G37730.1,TAIR:AT4G15240.1,TAIR:AT5G12460.1,TrEMBL:A5B465,TrEMBL:B9GEY9,TrEMBL:D7SKA5;Derives_from=GSCOCT00028549001;Name=Cc01_g04850;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of unknown function (DUF604),CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028549001~ Putative Protein of unknown function (DUF604)~ unknown_gene~ fragment;original_location=complement(join(781027..781398%2C779114..779662));owner=coffea | |
| 5819 chr1 manual_curation exon 17481969 17482517 . - . Parent=GSCOCT00028549001 | |
| 5820 chr1 manual_curation exon 17483882 17484253 . - . Parent=GSCOCT00028549001 | |
| 5821 chr1 manual_curation CDS 17481969 17482517 . - 0 Parent=GSCOCT00028549001 | |
| 5822 chr1 manual_curation CDS 17483882 17484253 . - 0 Parent=GSCOCT00028549001 | |
| 5823 chr1 manual_curation gene 17516784 17532015 . - . ID=GSCOCG00028550001;Name=Cc01_g04860 | |
| 5824 chr1 manual_curation mRNA 17516784 17532015 . - . ID=GSCOCT00028550001;Parent=GSCOCG00028550001;Name=Cc01_g04860 | |
| 5825 chr1 manual_curation polypeptide 17517062 17531802 . - . ID=GSCOCP00028550001;Dbxref=GENE3D:G3DSA:2.60.200.30,InterPro:IPR002504,InterPro:IPR016064,InterPro:IPR017437,PANTHER:PTHR20275,PFAM:PF01513,SUPERFAMILY:SSF111331,SwissProt:Q56YN3,SwissProt:Q5JK52,SwissProt:Q60E60,TAIR:AT1G21640.2,TAIR:AT3G21070.1,TrEMBL:B9HNY6,TrEMBL:B9RIE7,TrEMBL:F6GU32;Derives_from=GSCOCT00028550001;Name=Cc01_g04860;Ontology_term=CC_evidence_code:ISS,GO:0003951,GO:0008152,CC_EC_number:2.7.1.23,PRODUCT:NAD(H) kinase 1,CC_functional_completeness:complete,CC_gene:NADK1,CC_gene:Os01g0957000,CC_gene:Os05g0388400;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028550001~ NAD(H) kinase 1~ NADK1~ complete;original_location=complement(join(828915..828947%2C827173..827320%2C826963..827082%2C825810..826006%2C825340..825453%2C825061..825155%2C823794..823900%2C822258..822331%2C816044..816122%2C815556..815863%2C814207..814518));owner=coffea | |
| 5826 chr1 manual_curation exon 17516784 17517373 . - . Parent=GSCOCT00028550001 | |
| 5827 chr1 manual_curation exon 17518411 17518718 . - . Parent=GSCOCT00028550001 | |
| 5828 chr1 manual_curation exon 17518899 17518977 . - . Parent=GSCOCT00028550001 | |
| 5829 chr1 manual_curation exon 17525113 17525186 . - . Parent=GSCOCT00028550001 | |
| 5830 chr1 manual_curation exon 17526649 17526755 . - . Parent=GSCOCT00028550001 | |
| 5831 chr1 manual_curation exon 17527916 17528010 . - . Parent=GSCOCT00028550001 | |
| 5832 chr1 manual_curation exon 17528195 17528308 . - . Parent=GSCOCT00028550001 | |
| 5833 chr1 manual_curation exon 17528665 17528861 . - . Parent=GSCOCT00028550001 | |
| 5834 chr1 manual_curation exon 17529818 17529937 . - . Parent=GSCOCT00028550001 | |
| 5835 chr1 manual_curation exon 17530028 17530175 . - . Parent=GSCOCT00028550001 | |
| 5836 chr1 manual_curation exon 17531770 17532015 . - . Parent=GSCOCT00028550001 | |
| 5837 chr1 manual_curation CDS 17517062 17517373 . - 0 Parent=GSCOCT00028550001 | |
| 5838 chr1 manual_curation CDS 17518411 17518718 . - 1 Parent=GSCOCT00028550001 | |
| 5839 chr1 manual_curation CDS 17518899 17518977 . - 0 Parent=GSCOCT00028550001 | |
| 5840 chr1 manual_curation CDS 17525113 17525186 . - 1 Parent=GSCOCT00028550001 | |
| 5841 chr1 manual_curation CDS 17526649 17526755 . - 2 Parent=GSCOCT00028550001 | |
| 5842 chr1 manual_curation CDS 17527916 17528010 . - 0 Parent=GSCOCT00028550001 | |
| 5843 chr1 manual_curation CDS 17528195 17528308 . - 0 Parent=GSCOCT00028550001 | |
| 5844 chr1 manual_curation CDS 17528665 17528861 . - 1 Parent=GSCOCT00028550001 | |
| 5845 chr1 manual_curation CDS 17529818 17529937 . - 1 Parent=GSCOCT00028550001 | |
| 5846 chr1 manual_curation CDS 17530028 17530175 . - 0 Parent=GSCOCT00028550001 | |
| 5847 chr1 manual_curation CDS 17531770 17531802 . - 0 Parent=GSCOCT00028550001 | |
| 5848 chr1 manual_curation gene 17662240 17663662 . + . ID=GSCOCG00028551001;Name=Cc01_g04870 | |
| 5849 chr1 manual_curation mRNA 17662240 17663662 . + . ID=GSCOCT00028551001;Parent=GSCOCG00028551001;Name=Cc01_g04870 | |
| 5850 chr1 manual_curation polypeptide 17662664 17663662 . + . ID=GSCOCP00028551001;Derives_from=GSCOCT00028551001;Name=Cc01_g04870;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028551001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(959809..959817%2C960148..960807);owner=coffea | |
| 5851 chr1 manual_curation exon 17662240 17662672 . + . Parent=GSCOCT00028551001 | |
| 5852 chr1 manual_curation exon 17663003 17663662 . + . Parent=GSCOCT00028551001 | |
| 5853 chr1 manual_curation CDS 17662664 17662672 . + 0 Parent=GSCOCT00028551001 | |
| 5854 chr1 manual_curation CDS 17663003 17663662 . + 0 Parent=GSCOCT00028551001 | |
| 5855 chr1 manual_curation gene 17737610 17739476 . + . ID=GSCOCG00028557001;Name=Cc01_g04880 | |
| 5856 chr1 manual_curation mRNA 17737610 17739476 . + . ID=GSCOCT00028557001;Parent=GSCOCG00028557001;Name=Cc01_g04880 | |
| 5857 chr1 manual_curation polypeptide 17739192 17739476 . + . ID=GSCOCP00028557001;Dbxref=InterPro:IPR008906,PFAM:PF05699,SwissProt:P03010,SwissProt:P08770,TAIR:AT3G42170.1,TrEMBL:A5AJ27,TrEMBL:A5BUJ2,TrEMBL:A5C6E9;Derives_from=GSCOCT00028557001;Name=Cc01_g04880;Ontology_term=CC_evidence_code:ISS,GO:0046983,CC_EC_number:missing_EC_number,PRODUCT:Putative AC transposase,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028557001~ Putative AC transposase~ unknown_gene~ fragment;original_location=1036337..1036621;owner=coffea | |
| 5858 chr1 manual_curation exon 17737610 17738087 . + . Parent=GSCOCT00028557001 | |
| 5859 chr1 manual_curation exon 17738169 17739476 . + . Parent=GSCOCT00028557001 | |
| 5860 chr1 manual_curation CDS 17739192 17739476 . + 0 Parent=GSCOCT00028557001 | |
| 5861 chr1 manual_curation gene 17747209 17751403 . + . ID=GSCOCG00028560001;Name=Cc01_g04890 | |
| 5862 chr1 manual_curation mRNA 17747209 17751403 . + . ID=GSCOCT00028560001;Parent=GSCOCG00028560001;Name=Cc01_g04890 | |
| 5863 chr1 manual_curation polypeptide 17748091 17751133 . + . ID=GSCOCP00028560001;Dbxref=InterPro:IPR001870,InterPro:IPR003877,InterPro:IPR018355,PFAM:PF00622,PROFILE:PS50188,SMART:SM00449,SwissProt:O60070,SwissProt:Q91X20,SwissProt:Q9UBL3,TAIR:AT1G51450.1,TrEMBL:B9GEU8,TrEMBL:B9HNY7,TrEMBL:B9RIE8;Derives_from=GSCOCT00028560001;Name=Cc01_g04890;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Set1/Ash2 histone methyltransferase complex subunit ASH2,CC_functional_completeness:fragment,CC_gene:Ash2l,CC_gene:ASH2L,CC_gene:ash2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028560001~ Putative Set1/Ash2 histone methyltransferase complex subunit ASH2~ Ash2l~ fragment;original_location=join(1045236..1045599%2C1047255..1047494%2C1048184..1048278);owner=coffea | |
| 5864 chr1 manual_curation exon 17747209 17748454 . + . Parent=GSCOCT00028560001 | |
| 5865 chr1 manual_curation exon 17750110 17750349 . + . Parent=GSCOCT00028560001 | |
| 5866 chr1 manual_curation exon 17751039 17751403 . + . Parent=GSCOCT00028560001 | |
| 5867 chr1 manual_curation CDS 17748091 17748454 . + 0 Parent=GSCOCT00028560001 | |
| 5868 chr1 manual_curation CDS 17750110 17750349 . + 1 Parent=GSCOCT00028560001 | |
| 5869 chr1 manual_curation CDS 17751039 17751133 . + 1 Parent=GSCOCT00028560001 | |
| 5870 chr1 manual_curation gene 17781827 17784466 . - . ID=GSCOCG00028563001;Name=Cc01_g04900 | |
| 5871 chr1 manual_curation mRNA 17781827 17784466 . - . ID=GSCOCT00028563001;Parent=GSCOCG00028563001;Name=Cc01_g04900 | |
| 5872 chr1 manual_curation polypeptide 17781827 17784466 . - . ID=GSCOCP00028563001;Dbxref=InterPro:IPR005202,PFAM:PF03514,PROFILE:PS50985,SwissProt:Q2Z2E9,SwissProt:Q9AVK4,SwissProt:Q9M384,TAIR:AT3G03450.1,TAIR:AT3G54220.1,TAIR:AT5G41920.1,TrEMBL:B9IGZ8,TrEMBL:B9S1W4,TrEMBL:F6HMQ2;Derives_from=GSCOCT00028563001;Name=Cc01_g04900;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein SCARECROW,CC_functional_completeness:fragment,CC_gene:SCR;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028563001~ Protein SCARECROW~ SCR~ fragment;original_location=complement(join(1081559..1081611%2C1081286..1081495%2C1079649..1079757%2C1078972..1079055));owner=coffea | |
| 5873 chr1 manual_curation exon 17781827 17781910 . - . Parent=GSCOCT00028563001 | |
| 5874 chr1 manual_curation exon 17782504 17782612 . - . Parent=GSCOCT00028563001 | |
| 5875 chr1 manual_curation exon 17784141 17784350 . - . Parent=GSCOCT00028563001 | |
| 5876 chr1 manual_curation exon 17784414 17784466 . - . Parent=GSCOCT00028563001 | |
| 5877 chr1 manual_curation CDS 17781827 17781910 . - 0 Parent=GSCOCT00028563001 | |
| 5878 chr1 manual_curation CDS 17782504 17782612 . - 2 Parent=GSCOCT00028563001 | |
| 5879 chr1 manual_curation CDS 17784141 17784350 . - 2 Parent=GSCOCT00028563001 | |
| 5880 chr1 manual_curation CDS 17784414 17784466 . - 0 Parent=GSCOCT00028563001 | |
| 5881 chr1 manual_curation gene 17805065 17810657 . - . ID=GSCOCG00028564001;Name=Cc01_g04910 | |
| 5882 chr1 manual_curation mRNA 17805065 17810657 . - . ID=GSCOCT00028564001;Parent=GSCOCG00028564001;Name=Cc01_g04910 | |
| 5883 chr1 manual_curation polypeptide 17805358 17810657 . - . ID=GSCOCP00028564001;Dbxref=InterPro:IPR013027,PFAM:PF07992,SwissProt:P08165,SwissProt:P22570,SwissProt:P82861,TAIR:AT4G32360.1,TrEMBL:B9GNB9,TrEMBL:B9SPA6,TrEMBL:D7TBK2;Derives_from=GSCOCT00028564001;Name=Cc01_g04910;Ontology_term=CC_evidence_code:ISS,CC_EC_number:1.18.1.2,PRODUCT:Putative NADPH,CC_functional_completeness:complete,CC_gene:fdxr,CC_gene:FDXR;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028564001~ Putative NADPH:adrenodoxin oxidoreductase%2C mitochondrial~ fdxr~ complete;original_location=complement(join(1107686..1107802%2C1107366..1107470%2C1106654..1106767%2C1106498..1106551%2C1106220..1106336%2C1105464..1105573%2C1105312..1105385%2C1104871..1104932%2C1104577..1104772%2C1104230..1104293%2C1103436..1103503%2C1102865..1103010%2C1102503..1102739));owner=coffea | |
| 5884 chr1 manual_curation exon 17805065 17805594 . - . Parent=GSCOCT00028564001 | |
| 5885 chr1 manual_curation exon 17805720 17805865 . - . Parent=GSCOCT00028564001 | |
| 5886 chr1 manual_curation exon 17806291 17806358 . - . Parent=GSCOCT00028564001 | |
| 5887 chr1 manual_curation exon 17807085 17807148 . - . Parent=GSCOCT00028564001 | |
| 5888 chr1 manual_curation exon 17807432 17807627 . - . Parent=GSCOCT00028564001 | |
| 5889 chr1 manual_curation exon 17807726 17807787 . - . Parent=GSCOCT00028564001 | |
| 5890 chr1 manual_curation exon 17808167 17808240 . - . Parent=GSCOCT00028564001 | |
| 5891 chr1 manual_curation exon 17808319 17808428 . - . Parent=GSCOCT00028564001 | |
| 5892 chr1 manual_curation exon 17809075 17809191 . - . Parent=GSCOCT00028564001 | |
| 5893 chr1 manual_curation exon 17809353 17809406 . - . Parent=GSCOCT00028564001 | |
| 5894 chr1 manual_curation exon 17809509 17809622 . - . Parent=GSCOCT00028564001 | |
| 5895 chr1 manual_curation exon 17810221 17810325 . - . Parent=GSCOCT00028564001 | |
| 5896 chr1 manual_curation exon 17810541 17810657 . - . Parent=GSCOCT00028564001 | |
| 5897 chr1 manual_curation CDS 17805358 17805594 . - 0 Parent=GSCOCT00028564001 | |
| 5898 chr1 manual_curation CDS 17805720 17805865 . - 1 Parent=GSCOCT00028564001 | |
| 5899 chr1 manual_curation CDS 17806291 17806358 . - 2 Parent=GSCOCT00028564001 | |
| 5900 chr1 manual_curation CDS 17807085 17807148 . - 1 Parent=GSCOCT00028564001 | |
| 5901 chr1 manual_curation CDS 17807432 17807627 . - 0 Parent=GSCOCT00028564001 | |
| 5902 chr1 manual_curation CDS 17807726 17807787 . - 1 Parent=GSCOCT00028564001 | |
| 5903 chr1 manual_curation CDS 17808167 17808240 . - 2 Parent=GSCOCT00028564001 | |
| 5904 chr1 manual_curation CDS 17808319 17808428 . - 0 Parent=GSCOCT00028564001 | |
| 5905 chr1 manual_curation CDS 17809075 17809191 . - 0 Parent=GSCOCT00028564001 | |
| 5906 chr1 manual_curation CDS 17809353 17809406 . - 0 Parent=GSCOCT00028564001 | |
| 5907 chr1 manual_curation CDS 17809509 17809622 . - 0 Parent=GSCOCT00028564001 | |
| 5908 chr1 manual_curation CDS 17810221 17810325 . - 0 Parent=GSCOCT00028564001 | |
| 5909 chr1 manual_curation CDS 17810541 17810657 . - 0 Parent=GSCOCT00028564001 | |
| 5910 chr1 manual_curation gene 17883017 17887031 . + . ID=GSCOCG00028569001;Name=Cc01_g04920 | |
| 5911 chr1 manual_curation mRNA 17883017 17887031 . + . ID=GSCOCT00028569001;Parent=GSCOCG00028569001;Name=Cc01_g04920 | |
| 5912 chr1 manual_curation polypeptide 17883398 17886737 . + . ID=GSCOCP00028569001;Dbxref=GENE3D:G3DSA:1.10.238.10,InterPro:IPR002048,InterPro:IPR007685,InterPro:IPR011992,InterPro:IPR018247,InterPro:IPR018248,InterPro:IPR018249,PFAM:PF00036,PFAM:PF04607,PROFILE:PS50222,PROSITE:PS00018,SMART:SM00054,SwissProt:O54408,SwissProt:O67012,SwissProt:Q8CS97,TAIR:AT1G54130.1,TAIR:AT3G14050.1,TAIR:AT3G17470.1,TrEMBL:D7T693,TrEMBL:E2JJC7,TrEMBL:Q84LE6;Derives_from=GSCOCT00028569001;Name=Cc01_g04920;Ontology_term=CC_evidence_code:ISS,GO:0005509,GO:0015969,CC_EC_number:2.7.6.5,PRODUCT:Ca2 -activated RelA/spot homolog,CC_functional_completeness:complete,CC_gene:spoT,CC_gene:relA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028569001~ Ca2 -activated RelA/spot homolog~ spoT~ complete;original_location=join(1180543..1180574%2C1180629..1180800%2C1181649..1182581%2C1183039..1183323%2C1183775..1183882);owner=coffea | |
| 5913 chr1 manual_curation exon 17883017 17883429 . + . Parent=GSCOCT00028569001 | |
| 5914 chr1 manual_curation exon 17883484 17883655 . + . Parent=GSCOCT00028569001 | |
| 5915 chr1 manual_curation exon 17884504 17885436 . + . Parent=GSCOCT00028569001 | |
| 5916 chr1 manual_curation exon 17885894 17886178 . + . Parent=GSCOCT00028569001 | |
| 5917 chr1 manual_curation exon 17886630 17887031 . + . Parent=GSCOCT00028569001 | |
| 5918 chr1 manual_curation CDS 17883398 17883429 . + 0 Parent=GSCOCT00028569001 | |
| 5919 chr1 manual_curation CDS 17883484 17883655 . + 2 Parent=GSCOCT00028569001 | |
| 5920 chr1 manual_curation CDS 17884504 17885436 . + 0 Parent=GSCOCT00028569001 | |
| 5921 chr1 manual_curation CDS 17885894 17886178 . + 0 Parent=GSCOCT00028569001 | |
| 5922 chr1 manual_curation CDS 17886630 17886737 . + 0 Parent=GSCOCT00028569001 | |
| 5923 chr1 manual_curation gene 17887669 17888807 . + . ID=GSCOCG00028570001;Name=Cc01_g04930 | |
| 5924 chr1 manual_curation mRNA 17887669 17888807 . + . ID=GSCOCT00028570001;Parent=GSCOCG00028570001;Name=Cc01_g04930 | |
| 5925 chr1 manual_curation polypeptide 17887669 17887866 . + . ID=GSCOCP00028570001;Derives_from=GSCOCT00028570001;Name=Cc01_g04930;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028570001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1184814..1185011;owner=coffea | |
| 5926 chr1 manual_curation exon 17887669 17888807 . + . Parent=GSCOCT00028570001 | |
| 5927 chr1 manual_curation CDS 17887669 17887866 . + 0 Parent=GSCOCT00028570001 | |
| 5928 chr1 manual_curation gene 17890339 17897811 . - . ID=GSCOCG00028571001;Name=Cc01_g04940 | |
| 5929 chr1 manual_curation mRNA 17890339 17897811 . - . ID=GSCOCT00028571001;Parent=GSCOCG00028571001;Name=Cc01_g04940 | |
| 5930 chr1 manual_curation polypeptide 17890546 17897730 . - . ID=GSCOCP00028571001;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR013525,InterPro:IPR017871,PFAM:PF00005,PFAM:PF01061,PROFILE:PS50893,PROSITE:PS00211,SMART:SM00382,SwissProt:Q8RWI9,SwissProt:Q9C8J8,SwissProt:Q9C8K2,TAIR:AT1G51460.1,TAIR:AT1G51500.1,TAIR:AT3G21090.1,TrEMBL:B9GEU6,TrEMBL:B9GEU7,TrEMBL:B9HNY8;Derives_from=GSCOCT00028571001;Name=Cc01_g04940;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0016020,GO:0016887,GO:0017111,CC_EC_number:3.6.3.44,CC_EC_number:3.6.3.44,PRODUCT:ABC transporter G family member 15,CC_functional_completeness:complete,CC_gene:ABCG15,CC_gene:ABCG12,CC_gene:ABCG13;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028571001~ ABC transporter G family member 15~ ABCG15~ complete;original_location=complement(join(1194620..1194875%2C1192574..1192653%2C1190970..1191431%2C1190311..1190433%2C1190047..1190178%2C1189533..1189826%2C1188876..1189148%2C1188673..1188780%2C1187691..1188053));owner=coffea | |
| 5931 chr1 manual_curation exon 17890339 17890908 . - . Parent=GSCOCT00028571001 | |
| 5932 chr1 manual_curation exon 17891528 17891635 . - . Parent=GSCOCT00028571001 | |
| 5933 chr1 manual_curation exon 17891731 17892003 . - . Parent=GSCOCT00028571001 | |
| 5934 chr1 manual_curation exon 17892388 17892681 . - . Parent=GSCOCT00028571001 | |
| 5935 chr1 manual_curation exon 17892902 17893033 . - . Parent=GSCOCT00028571001 | |
| 5936 chr1 manual_curation exon 17893166 17893288 . - . Parent=GSCOCT00028571001 | |
| 5937 chr1 manual_curation exon 17893825 17894286 . - . Parent=GSCOCT00028571001 | |
| 5938 chr1 manual_curation exon 17895429 17895508 . - . Parent=GSCOCT00028571001 | |
| 5939 chr1 manual_curation exon 17897475 17897811 . - . Parent=GSCOCT00028571001 | |
| 5940 chr1 manual_curation CDS 17890546 17890908 . - 0 Parent=GSCOCT00028571001 | |
| 5941 chr1 manual_curation CDS 17891528 17891635 . - 0 Parent=GSCOCT00028571001 | |
| 5942 chr1 manual_curation CDS 17891731 17892003 . - 0 Parent=GSCOCT00028571001 | |
| 5943 chr1 manual_curation CDS 17892388 17892681 . - 0 Parent=GSCOCT00028571001 | |
| 5944 chr1 manual_curation CDS 17892902 17893033 . - 0 Parent=GSCOCT00028571001 | |
| 5945 chr1 manual_curation CDS 17893166 17893288 . - 0 Parent=GSCOCT00028571001 | |
| 5946 chr1 manual_curation CDS 17893825 17894286 . - 0 Parent=GSCOCT00028571001 | |
| 5947 chr1 manual_curation CDS 17895429 17895508 . - 1 Parent=GSCOCT00028571001 | |
| 5948 chr1 manual_curation CDS 17897475 17897730 . - 0 Parent=GSCOCT00028571001 | |
| 5949 chr1 manual_curation gene 17926731 17929402 . + . ID=GSCOCG00028572001;Name=Cc01_g04950 | |
| 5950 chr1 manual_curation mRNA 17926731 17929402 . + . ID=GSCOCT00028572001;Parent=GSCOCG00028572001;Name=Cc01_g04950 | |
| 5951 chr1 manual_curation polypeptide 17926731 17929402 . + . ID=GSCOCP00028572001;Dbxref=SwissProt:P24397,SwissProt:Q05963,SwissProt:Q40062,TAIR:AT3G13610.1,TAIR:AT4G10490.1,TAIR:AT5G24530.1,TrEMBL:B9T297,TrEMBL:D7U2Y4,TrEMBL:Q8LKP6;Derives_from=GSCOCT00028572001;Name=Cc01_g04950;Ontology_term=CC_evidence_code:ISS,CC_EC_number:1.14.11.11,PRODUCT:Putative Naringenin%2C2-oxoglutarate 3-dioxygenase,CC_functional_completeness:fragment,CC_gene:H6H,CC_gene:FHT,CC_gene:IDS3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028572001~ Putative Naringenin%2C2-oxoglutarate 3-dioxygenase~ H6H~ fragment;original_location=join(1223876..1224070%2C1224163..1224327%2C1225070..1225202%2C1225485..1225760%2C1226486..1226547);owner=coffea | |
| 5952 chr1 manual_curation exon 17926731 17926925 . + . Parent=GSCOCT00028572001 | |
| 5953 chr1 manual_curation exon 17927018 17927182 . + . Parent=GSCOCT00028572001 | |
| 5954 chr1 manual_curation exon 17927925 17928057 . + . Parent=GSCOCT00028572001 | |
| 5955 chr1 manual_curation exon 17928340 17928615 . + . Parent=GSCOCT00028572001 | |
| 5956 chr1 manual_curation exon 17929341 17929402 . + . Parent=GSCOCT00028572001 | |
| 5957 chr1 manual_curation CDS 17926731 17926925 . + 0 Parent=GSCOCT00028572001 | |
| 5958 chr1 manual_curation CDS 17927018 17927182 . + 0 Parent=GSCOCT00028572001 | |
| 5959 chr1 manual_curation CDS 17927925 17928057 . + 0 Parent=GSCOCT00028572001 | |
| 5960 chr1 manual_curation CDS 17928340 17928615 . + 1 Parent=GSCOCT00028572001 | |
| 5961 chr1 manual_curation CDS 17929341 17929402 . + 1 Parent=GSCOCT00028572001 | |
| 5962 chr1 manual_curation gene 17934798 17946391 . - . ID=GSCOCG00028573001;Name=Cc01_g04960 | |
| 5963 chr1 manual_curation mRNA 17934798 17946391 . - . ID=GSCOCT00028573001;Parent=GSCOCG00028573001;Name=Cc01_g04960 | |
| 5964 chr1 manual_curation polypeptide 17935087 17946128 . - . ID=GSCOCP00028573001;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR013525,InterPro:IPR017871,PFAM:PF00005,PFAM:PF01061,PROFILE:PS50893,PROSITE:PS00211,SMART:SM00382,SwissProt:Q8RWI9,SwissProt:Q9C8J8,SwissProt:Q9C8K2,TAIR:AT1G51460.1,TAIR:AT1G51500.1,TAIR:AT3G21090.1,TrEMBL:B9GEU6,TrEMBL:B9HNY9,TrEMBL:B9RIF1;Derives_from=GSCOCT00028573001;Name=Cc01_g04960;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0016020,GO:0016887,GO:0017111,CC_EC_number:3.6.3.44,CC_EC_number:3.6.3.44,PRODUCT:ABC transporter G family member 15,CC_functional_completeness:complete,CC_gene:ABCG15,CC_gene:ABCG12,CC_gene:ABCG13;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028573001~ ABC transporter G family member 15~ ABCG15~ complete;original_location=complement(join(1243024..1243273%2C1238671..1238750%2C1237487..1237948%2C1237175..1237297%2C1235861..1235992%2C1235275..1235559%2C1234908..1235180%2C1234706..1234813%2C1232232..1232588));owner=coffea | |
| 5965 chr1 manual_curation exon 17946276 17946391 . - . Parent=GSCOCT00028573001 | |
| 5966 chr1 manual_curation exon 17934798 17935443 . - . Parent=GSCOCT00028573001 | |
| 5967 chr1 manual_curation exon 17937561 17937668 . - . Parent=GSCOCT00028573001 | |
| 5968 chr1 manual_curation exon 17937763 17938035 . - . Parent=GSCOCT00028573001 | |
| 5969 chr1 manual_curation exon 17938130 17938414 . - . Parent=GSCOCT00028573001 | |
| 5970 chr1 manual_curation exon 17938716 17938847 . - . Parent=GSCOCT00028573001 | |
| 5971 chr1 manual_curation exon 17940030 17940152 . - . Parent=GSCOCT00028573001 | |
| 5972 chr1 manual_curation exon 17940342 17940803 . - . Parent=GSCOCT00028573001 | |
| 5973 chr1 manual_curation exon 17941526 17941605 . - . Parent=GSCOCT00028573001 | |
| 5974 chr1 manual_curation exon 17945879 17946181 . - . Parent=GSCOCT00028573001 | |
| 5975 chr1 manual_curation CDS 17935087 17935443 . - 0 Parent=GSCOCT00028573001 | |
| 5976 chr1 manual_curation CDS 17937561 17937668 . - 0 Parent=GSCOCT00028573001 | |
| 5977 chr1 manual_curation CDS 17937763 17938035 . - 0 Parent=GSCOCT00028573001 | |
| 5978 chr1 manual_curation CDS 17938130 17938414 . - 0 Parent=GSCOCT00028573001 | |
| 5979 chr1 manual_curation CDS 17938716 17938847 . - 0 Parent=GSCOCT00028573001 | |
| 5980 chr1 manual_curation CDS 17940030 17940152 . - 0 Parent=GSCOCT00028573001 | |
| 5981 chr1 manual_curation CDS 17940342 17940803 . - 0 Parent=GSCOCT00028573001 | |
| 5982 chr1 manual_curation CDS 17941526 17941605 . - 1 Parent=GSCOCT00028573001 | |
| 5983 chr1 manual_curation CDS 17945879 17946128 . - 0 Parent=GSCOCT00028573001 | |
| 5984 chr1 manual_curation gene 17956405 17961852 . - . ID=GSCOCG00028574001;Name=Cc01_g04970 | |
| 5985 chr1 manual_curation mRNA 17956405 17961852 . - . ID=GSCOCT00028574001;Parent=GSCOCG00028574001;Name=Cc01_g04970 | |
| 5986 chr1 manual_curation polypeptide 17956896 17961852 . - . ID=GSCOCP00028574001;Dbxref=GENE3D:G3DSA:2.130.10.30,InterPro:IPR000408,InterPro:IPR009091,PFAM:PF00415,PRINTS:PR00633,PROFILE:PS50012,PROSITE:PS00626,SUPERFAMILY:SSF50985,SwissProt:O95714,SwissProt:Q4U2R1,SwissProt:Q9VR91,TAIR:AT5G16040.1,TAIR:AT5G60870.1,TAIR:AT5G63860.1,TrEMBL:B9R8I6,TrEMBL:D7MUF0,TrEMBL:Q9FJG9;Derives_from=GSCOCT00028574001;Name=Cc01_g04970;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative E3 ubiquitin-protein ligase HERC2,CC_functional_completeness:fragment,CC_gene:Herc2,CC_gene:HERC2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028574001~ Putative E3 ubiquitin-protein ligase HERC2~ Herc2~ fragment;original_location=complement(join(1258438..1258997%2C1257649..1257788%2C1256704..1256898%2C1255069..1255197%2C1254841..1254996%2C1254041..1254234));owner=coffea | |
| 5987 chr1 manual_curation exon 17956405 17957089 . - . Parent=GSCOCT00028574001 | |
| 5988 chr1 manual_curation exon 17957696 17957851 . - . Parent=GSCOCT00028574001 | |
| 5989 chr1 manual_curation exon 17957924 17958052 . - . Parent=GSCOCT00028574001 | |
| 5990 chr1 manual_curation exon 17959559 17959753 . - . Parent=GSCOCT00028574001 | |
| 5991 chr1 manual_curation exon 17960504 17960643 . - . Parent=GSCOCT00028574001 | |
| 5992 chr1 manual_curation exon 17961293 17961852 . - . Parent=GSCOCT00028574001 | |
| 5993 chr1 manual_curation CDS 17956896 17957089 . - 1 Parent=GSCOCT00028574001 | |
| 5994 chr1 manual_curation CDS 17957696 17957851 . - 1 Parent=GSCOCT00028574001 | |
| 5995 chr1 manual_curation CDS 17957924 17958052 . - 1 Parent=GSCOCT00028574001 | |
| 5996 chr1 manual_curation CDS 17959559 17959753 . - 1 Parent=GSCOCT00028574001 | |
| 5997 chr1 manual_curation CDS 17960504 17960643 . - 2 Parent=GSCOCT00028574001 | |
| 5998 chr1 manual_curation CDS 17961293 17961852 . - 0 Parent=GSCOCT00028574001 | |
| 5999 chr1 manual_curation gene 17964577 17965314 . + . ID=GSCOCG00028575001;Name=Cc01_g04980 | |
| 6000 chr1 manual_curation mRNA 17964577 17965314 . + . ID=GSCOCT00028575001;Parent=GSCOCG00028575001;Name=Cc01_g04980 | |
| 6001 chr1 manual_curation polypeptide 17964577 17965314 . + . ID=GSCOCP00028575001;Dbxref=InterPro:IPR002182,PFAM:PF00931,SwissProt:Q7XA39,SwissProt:Q7XA40,SwissProt:Q7XBQ9,TAIR:AT1G53350.1,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TrEMBL:A5C799,TrEMBL:B9S050,TrEMBL:F6HVE6;Derives_from=GSCOCT00028575001;Name=Cc01_g04980;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance protein RGA3,CC_functional_completeness:fragment,CC_gene:RGA3,CC_gene:RGA2,CC_gene:RGA4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028575001~ Putative disease resistance protein RGA3~ RGA3~ fragment;original_location=join(1261722..1262030%2C1262088..1262459);owner=coffea | |
| 6002 chr1 manual_curation exon 17964577 17964885 . + . Parent=GSCOCT00028575001 | |
| 6003 chr1 manual_curation exon 17964943 17965314 . + . Parent=GSCOCT00028575001 | |
| 6004 chr1 manual_curation CDS 17964577 17964885 . + 0 Parent=GSCOCT00028575001 | |
| 6005 chr1 manual_curation CDS 17964943 17965314 . + 0 Parent=GSCOCT00028575001 | |
| 6006 chr1 manual_curation gene 18048716 18052406 . - . ID=GSCOCG00028576001;Name=Cc01_g04990 | |
| 6007 chr1 manual_curation mRNA 18048716 18052406 . - . ID=GSCOCT00028576001;Parent=GSCOCG00028576001;Name=Cc01_g04990 | |
| 6008 chr1 manual_curation polypeptide 18048851 18052406 . - . ID=GSCOCP00028576001;Derives_from=GSCOCT00028576001;Name=Cc01_g04990;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028576001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1349515..1349551%2C1345996..1346102));owner=coffea | |
| 6009 chr1 manual_curation exon 18048716 18048957 . - . Parent=GSCOCT00028576001 | |
| 6010 chr1 manual_curation exon 18052370 18052406 . - . Parent=GSCOCT00028576001 | |
| 6011 chr1 manual_curation CDS 18048851 18048957 . - 1 Parent=GSCOCT00028576001 | |
| 6012 chr1 manual_curation CDS 18052370 18052406 . - 0 Parent=GSCOCT00028576001 | |
| 6013 chr1 manual_curation gene 18052574 18053123 . - . ID=GSCOCG00028577001;Name=Cc01_g05000 | |
| 6014 chr1 manual_curation mRNA 18052574 18053123 . - . ID=GSCOCT00028577001;Parent=GSCOCG00028577001;Name=Cc01_g05000 | |
| 6015 chr1 manual_curation polypeptide 18052574 18053069 . - . ID=GSCOCP00028577001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR006447,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR014778,PFAM:PF00249,SUPERFAMILY:SSF46689,SwissProt:Q700D9,SwissProt:Q9FJV5,SwissProt:Q9SAK5,TAIR:AT1G69580.2,TAIR:AT2G06020.1,TAIR:AT4G13640.2,TIGRFAMs:TIGR01557,TrEMBL:D8QX78,TrEMBL:D8SY19,TrEMBL:Q9ZPZ8;Derives_from=GSCOCT00028577001;Name=Cc01_g05000;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable transcription factor KAN4,CC_functional_completeness:fragment,CC_gene:At1g14600,CC_gene:APL,CC_gene:KAN4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028577001~ Putative Probable transcription factor KAN4~ At1g14600~ fragment;original_location=complement(join(1350064..1350214%2C1349891..1349967%2C1349719..1349802));owner=coffea | |
| 6016 chr1 manual_curation exon 18052574 18052657 . - . Parent=GSCOCT00028577001 | |
| 6017 chr1 manual_curation exon 18052746 18052822 . - . Parent=GSCOCT00028577001 | |
| 6018 chr1 manual_curation exon 18052919 18053123 . - . Parent=GSCOCT00028577001 | |
| 6019 chr1 manual_curation CDS 18052574 18052657 . - 0 Parent=GSCOCT00028577001 | |
| 6020 chr1 manual_curation CDS 18052746 18052822 . - 1 Parent=GSCOCT00028577001 | |
| 6021 chr1 manual_curation CDS 18052919 18053069 . - 0 Parent=GSCOCT00028577001 | |
| 6022 chr1 manual_curation gene 18329502 18332825 . + . ID=GSCOCG00028585001;Name=Cc01_g05010 | |
| 6023 chr1 manual_curation mRNA 18329502 18332825 . + . ID=GSCOCT00028585001;Parent=GSCOCG00028585001;Name=Cc01_g05010 | |
| 6024 chr1 manual_curation polypeptide 18329502 18332825 . + . ID=GSCOCP00028585001;Derives_from=GSCOCT00028585001;Name=Cc01_g05010;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028585001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(1626647..1626696%2C1626837..1626903%2C1629716..1629970);owner=coffea | |
| 6025 chr1 manual_curation exon 18329502 18329551 . + . Parent=GSCOCT00028585001 | |
| 6026 chr1 manual_curation exon 18329692 18329758 . + . Parent=GSCOCT00028585001 | |
| 6027 chr1 manual_curation exon 18332571 18332825 . + . Parent=GSCOCT00028585001 | |
| 6028 chr1 manual_curation CDS 18329502 18329551 . + 0 Parent=GSCOCT00028585001 | |
| 6029 chr1 manual_curation CDS 18329692 18329758 . + 2 Parent=GSCOCT00028585001 | |
| 6030 chr1 manual_curation CDS 18332571 18332825 . + 0 Parent=GSCOCT00028585001 | |
| 6031 chr1 manual_curation gene 18415515 18423686 . + . ID=GSCOCG00028586001;Name=Cc01_g05020 | |
| 6032 chr1 manual_curation mRNA 18415515 18423686 . + . ID=GSCOCT00028586001;Parent=GSCOCG00028586001;Name=Cc01_g05020 | |
| 6033 chr1 manual_curation polypeptide 18415642 18423391 . + . ID=GSCOCP00028586001;Dbxref=TrEMBL:A5BZV5,TrEMBL:B9RIF3,TrEMBL:D7SNF2;Derives_from=GSCOCT00028586001;Name=Cc01_g05020;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028586001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=join(1712787..1713359%2C1713845..1713975%2C1714107..1714169%2C1714288..1714377%2C1714509..1714674%2C1715208..1715397%2C1717861..1718699%2C1719248..1719862%2C1719946..1720011%2C1720429..1720536);owner=coffea | |
| 6034 chr1 manual_curation exon 18415515 18416214 . + . Parent=GSCOCT00028586001 | |
| 6035 chr1 manual_curation exon 18416700 18416830 . + . Parent=GSCOCT00028586001 | |
| 6036 chr1 manual_curation exon 18416962 18417024 . + . Parent=GSCOCT00028586001 | |
| 6037 chr1 manual_curation exon 18417143 18417232 . + . Parent=GSCOCT00028586001 | |
| 6038 chr1 manual_curation exon 18417364 18417529 . + . Parent=GSCOCT00028586001 | |
| 6039 chr1 manual_curation exon 18418063 18418252 . + . Parent=GSCOCT00028586001 | |
| 6040 chr1 manual_curation exon 18420716 18421554 . + . Parent=GSCOCT00028586001 | |
| 6041 chr1 manual_curation exon 18422103 18422717 . + . Parent=GSCOCT00028586001 | |
| 6042 chr1 manual_curation exon 18422801 18422866 . + . Parent=GSCOCT00028586001 | |
| 6043 chr1 manual_curation exon 18423284 18423686 . + . Parent=GSCOCT00028586001 | |
| 6044 chr1 manual_curation CDS 18415642 18416214 . + 0 Parent=GSCOCT00028586001 | |
| 6045 chr1 manual_curation CDS 18416700 18416830 . + 0 Parent=GSCOCT00028586001 | |
| 6046 chr1 manual_curation CDS 18416962 18417024 . + 2 Parent=GSCOCT00028586001 | |
| 6047 chr1 manual_curation CDS 18417143 18417232 . + 2 Parent=GSCOCT00028586001 | |
| 6048 chr1 manual_curation CDS 18417364 18417529 . + 2 Parent=GSCOCT00028586001 | |
| 6049 chr1 manual_curation CDS 18418063 18418252 . + 0 Parent=GSCOCT00028586001 | |
| 6050 chr1 manual_curation CDS 18420716 18421554 . + 1 Parent=GSCOCT00028586001 | |
| 6051 chr1 manual_curation CDS 18422103 18422717 . + 0 Parent=GSCOCT00028586001 | |
| 6052 chr1 manual_curation CDS 18422801 18422866 . + 0 Parent=GSCOCT00028586001 | |
| 6053 chr1 manual_curation CDS 18423284 18423391 . + 0 Parent=GSCOCT00028586001 | |
| 6054 chr1 manual_curation gene 18425361 18430296 . - . ID=GSCOCG00028587001;Name=Cc01_g05030 | |
| 6055 chr1 manual_curation mRNA 18425361 18430296 . - . ID=GSCOCT00028587001;Parent=GSCOCG00028587001;Name=Cc01_g05030 | |
| 6056 chr1 manual_curation polypeptide 18426172 18430189 . - . ID=GSCOCP00028587001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR008111,InterPro:IPR012677,PFAM:PF00076,PRINTS:PR01738,PROFILE:PS50102,SMART:SM00360,SwissProt:B5DGI7,SwissProt:Q28BZ1,SwissProt:Q9V535,TAIR:AT1G51510.1,TrEMBL:B9RIF4,TrEMBL:D7U4F5,TrEMBL:Q3HRW9;Derives_from=GSCOCT00028587001;Name=Cc01_g05030;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,GO:0003723,GO:0005634,GO:0005737,GO:0006396,CC_EC_number:missing_EC_number,PRODUCT:RNA-binding protein 8A,CC_functional_completeness:modules,CC_gene:tsu,CC_gene:rbm8a;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028587001~ RNA-binding protein 8A~ tsu~ modules;original_location=complement(join(1727067..1727334%2C1724708..1724844%2C1724048..1724193%2C1723317..1723362));owner=coffea | |
| 6057 chr1 manual_curation exon 18425361 18426217 . - . Parent=GSCOCT00028587001 | |
| 6058 chr1 manual_curation exon 18426903 18427048 . - . Parent=GSCOCT00028587001 | |
| 6059 chr1 manual_curation exon 18427563 18427699 . - . Parent=GSCOCT00028587001 | |
| 6060 chr1 manual_curation exon 18429922 18430296 . - . Parent=GSCOCT00028587001 | |
| 6061 chr1 manual_curation CDS 18426172 18426217 . - 2 Parent=GSCOCT00028587001 | |
| 6062 chr1 manual_curation CDS 18426903 18427048 . - 0 Parent=GSCOCT00028587001 | |
| 6063 chr1 manual_curation CDS 18427563 18427699 . - 1 Parent=GSCOCT00028587001 | |
| 6064 chr1 manual_curation CDS 18429922 18430189 . - 0 Parent=GSCOCT00028587001 | |
| 6065 chr1 manual_curation gene 18642580 18646862 . + . ID=GSCOCG00028590001;Name=Cc01_g05040 | |
| 6066 chr1 manual_curation mRNA 18642580 18646862 . + . ID=GSCOCT00028590001;Parent=GSCOCG00028590001;Name=Cc01_g05040 | |
| 6067 chr1 manual_curation polypeptide 18643573 18645600 . + . ID=GSCOCP00028590001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q9FMF6,SwissProt:Q9LQ14,SwissProt:Q9M302,TAIR:AT1G62930.1,TAIR:AT3G48810.1,TAIR:AT5G64320.1,TIGRFAMs:TIGR00756,TrEMBL:B9HX52,TrEMBL:B9RZU8,TrEMBL:F6H707;Derives_from=GSCOCT00028590001;Name=Cc01_g05040;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Pentatricopeptide repeat-containing protein At3g48810,CC_functional_completeness:complete,CC_gene:At3g48810,CC_gene:At5g64320,CC_gene:At1g62930;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028590001~ Putative Pentatricopeptide repeat-containing protein At3g48810~ At3g48810~ complete;original_location=1940718..1942745;owner=coffea | |
| 6068 chr1 manual_curation exon 18642580 18646862 . + . Parent=GSCOCT00028590001 | |
| 6069 chr1 manual_curation CDS 18643573 18645600 . + 0 Parent=GSCOCT00028590001 | |
| 6070 chr1 manual_curation gene 18655675 18656622 . + . ID=GSCOCG00028591001;Name=Cc01_g05050 | |
| 6071 chr1 manual_curation mRNA 18655675 18656622 . + . ID=GSCOCT00028591001;Parent=GSCOCG00028591001;Name=Cc01_g05050 | |
| 6072 chr1 manual_curation polypeptide 18655781 18656622 . + . ID=GSCOCP00028591001;Dbxref=TrEMBL:B9HNZ2,TrEMBL:B9I4M3,TrEMBL:F6GWB2;Derives_from=GSCOCT00028591001;Name=Cc01_g05050;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028591001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=join(1952926..1953092%2C1953674..1953767);owner=coffea | |
| 6073 chr1 manual_curation exon 18655675 18655947 . + . Parent=GSCOCT00028591001 | |
| 6074 chr1 manual_curation exon 18656529 18656622 . + . Parent=GSCOCT00028591001 | |
| 6075 chr1 manual_curation CDS 18655781 18655947 . + 0 Parent=GSCOCT00028591001 | |
| 6076 chr1 manual_curation CDS 18656529 18656622 . + 2 Parent=GSCOCT00028591001 | |
| 6077 chr1 manual_curation gene 18659645 18660457 . + . ID=GSCOCG00028592001;Name=Cc01_g05060 | |
| 6078 chr1 manual_curation mRNA 18659645 18660457 . + . ID=GSCOCT00028592001;Parent=GSCOCG00028592001;Name=Cc01_g05060 | |
| 6079 chr1 manual_curation polypeptide 18659645 18660457 . + . ID=GSCOCP00028592001;Dbxref=SwissProt:Q5PQ59,SwissProt:Q6IQE9,SwissProt:Q8K2U2,TAIR:AT4G20350.2,TrEMBL:B9I795,TrEMBL:B9SK73,TrEMBL:D7SRK4;Derives_from=GSCOCT00028592001;Name=Cc01_g05060;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable alpha-ketoglutarate-dependent dioxygenase ABH6,CC_functional_completeness:complete,CC_gene:Alkbh6,CC_gene:alkbh6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028592001~ Putative Probable alpha-ketoglutarate-dependent dioxygenase ABH6~ Alkbh6~ complete;original_location=1956790..1957602;owner=coffea | |
| 6080 chr1 manual_curation exon 18659645 18660457 . + . Parent=GSCOCT00028592001 | |
| 6081 chr1 manual_curation CDS 18659645 18660457 . + 0 Parent=GSCOCT00028592001 | |
| 6082 chr1 manual_curation gene 18700163 18704665 . + . ID=GSCOCG00028593001;Name=Cc01_g05070 | |
| 6083 chr1 manual_curation mRNA 18700163 18704665 . + . ID=GSCOCT00028593001;Parent=GSCOCG00028593001;Name=Cc01_g05070 | |
| 6084 chr1 manual_curation polypeptide 18700995 18704170 . + . ID=GSCOCP00028593001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR000571,InterPro:IPR012677,PFAM:PF00076,PFAM:PF00642,PROFILE:PS50102,PROFILE:PS50103,SMART:SM00356,SMART:SM00360,SwissProt:Q0D3J9,SwissProt:Q10LZ9,SwissProt:Q10M00,TAIR:AT3G21100.2,TAIR:AT3G51950.1,TAIR:AT5G12440.1,TrEMBL:A5C749,TrEMBL:B9HNZ4,TrEMBL:B9RIF6;Derives_from=GSCOCT00028593001;Name=Cc01_g05070;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative Zinc finger CCCH domain-containing protein 22,CC_functional_completeness:complete,CC_gene:Os03g0328900,CC_gene:Os03g0329200,CC_gene:Os07g0682400;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028593001~ Putative Zinc finger CCCH domain-containing protein 22~ Os03g0328900~ complete;original_location=join(1998140..1998330%2C1998382..1999182%2C1999605..1999787%2C1999883..2000062%2C2000156..2000259%2C2000339..2000593%2C2000688..2000838%2C2000997..2001197%2C2001282..2001315);owner=coffea | |
| 6085 chr1 manual_curation exon 18704340 18704665 . + . Parent=GSCOCT00028593001 | |
| 6086 chr1 manual_curation exon 18700163 18701185 . + . Parent=GSCOCT00028593001 | |
| 6087 chr1 manual_curation exon 18701237 18702037 . + . Parent=GSCOCT00028593001 | |
| 6088 chr1 manual_curation exon 18702460 18702642 . + . Parent=GSCOCT00028593001 | |
| 6089 chr1 manual_curation exon 18702738 18702917 . + . Parent=GSCOCT00028593001 | |
| 6090 chr1 manual_curation exon 18703011 18703114 . + . Parent=GSCOCT00028593001 | |
| 6091 chr1 manual_curation exon 18703194 18703448 . + . Parent=GSCOCT00028593001 | |
| 6092 chr1 manual_curation exon 18703543 18703693 . + . Parent=GSCOCT00028593001 | |
| 6093 chr1 manual_curation exon 18703852 18704052 . + . Parent=GSCOCT00028593001 | |
| 6094 chr1 manual_curation exon 18704137 18704220 . + . Parent=GSCOCT00028593001 | |
| 6095 chr1 manual_curation CDS 18700995 18701185 . + 0 Parent=GSCOCT00028593001 | |
| 6096 chr1 manual_curation CDS 18701237 18702037 . + 2 Parent=GSCOCT00028593001 | |
| 6097 chr1 manual_curation CDS 18702460 18702642 . + 2 Parent=GSCOCT00028593001 | |
| 6098 chr1 manual_curation CDS 18702738 18702917 . + 2 Parent=GSCOCT00028593001 | |
| 6099 chr1 manual_curation CDS 18703011 18703114 . + 2 Parent=GSCOCT00028593001 | |
| 6100 chr1 manual_curation CDS 18703194 18703448 . + 1 Parent=GSCOCT00028593001 | |
| 6101 chr1 manual_curation CDS 18703543 18703693 . + 1 Parent=GSCOCT00028593001 | |
| 6102 chr1 manual_curation CDS 18703852 18704052 . + 2 Parent=GSCOCT00028593001 | |
| 6103 chr1 manual_curation CDS 18704137 18704170 . + 2 Parent=GSCOCT00028593001 | |
| 6104 chr1 manual_curation gene 18722474 18723136 . - . ID=GSCOCG00028594001;Name=Cc01_g05080 | |
| 6105 chr1 manual_curation mRNA 18722474 18723136 . - . ID=GSCOCT00028594001;Parent=GSCOCG00028594001;Name=Cc01_g05080 | |
| 6106 chr1 manual_curation polypeptide 18722474 18723136 . - . ID=GSCOCP00028594001;Derives_from=GSCOCT00028594001;Name=Cc01_g05080;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028594001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(2020273..2020281%2C2020126..2020164%2C2019619..2019711));owner=coffea | |
| 6107 chr1 manual_curation exon 18722474 18722566 . - . Parent=GSCOCT00028594001 | |
| 6108 chr1 manual_curation exon 18722981 18723019 . - . Parent=GSCOCT00028594001 | |
| 6109 chr1 manual_curation exon 18723128 18723136 . - . Parent=GSCOCT00028594001 | |
| 6110 chr1 manual_curation CDS 18722474 18722566 . - 0 Parent=GSCOCT00028594001 | |
| 6111 chr1 manual_curation CDS 18722981 18723019 . - 0 Parent=GSCOCT00028594001 | |
| 6112 chr1 manual_curation CDS 18723128 18723136 . - 0 Parent=GSCOCT00028594001 | |
| 6113 chr1 manual_curation gene 18752951 18753769 . - . ID=GSCOCG00028595001;Name=Cc01_g05090 | |
| 6114 chr1 manual_curation mRNA 18752951 18753769 . - . ID=GSCOCT00028595001;Parent=GSCOCG00028595001;Name=Cc01_g05090 | |
| 6115 chr1 manual_curation polypeptide 18752951 18753769 . - . ID=GSCOCP00028595001;Dbxref=InterPro:IPR000719,InterPro:IPR011009,InterPro:IPR017442,PFAM:PF00069,PROFILE:PS50011,SUPERFAMILY:SSF56112,SwissProt:Q6EU49,SwissProt:Q8S8Y8,SwissProt:Q9CAV6,TAIR:AT1G49160.2,TAIR:AT3G04910.1,TAIR:AT3G18750.1,TrEMBL:B6UH40,TrEMBL:B9T3L9,TrEMBL:C5Y1A5;Derives_from=GSCOCT00028595001;Name=Cc01_g05090;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0005524,GO:0006468,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable serine/threonine-protein kinase WNK4,CC_functional_completeness:fragment,CC_gene:WNK4,CC_gene:WNK6,CC_gene:WNK1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028595001~ Putative Probable serine/threonine-protein kinase WNK4~ WNK4~ fragment;original_location=complement(2050096..2050914);owner=coffea | |
| 6116 chr1 manual_curation exon 18752951 18753769 . - . Parent=GSCOCT00028595001 | |
| 6117 chr1 manual_curation CDS 18752951 18753769 . - 0 Parent=GSCOCT00028595001 | |
| 6118 chr1 manual_curation gene 18753896 18754375 . - . ID=GSCOCG00028596001;Name=Cc01_g05100 | |
| 6119 chr1 manual_curation mRNA 18753896 18754375 . - . ID=GSCOCT00028596001;Parent=GSCOCG00028596001;Name=Cc01_g05100 | |
| 6120 chr1 manual_curation polypeptide 18753896 18754375 . - . ID=GSCOCP00028596001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR011009,InterPro:IPR017442,PFAM:PF00069,PROFILE:PS50011,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q8LST2,SwissProt:Q8S8Y8,SwissProt:Q944Q0,TAIR:AT1G49160.2,TAIR:AT3G18750.1,TAIR:AT5G41990.1,TrEMBL:A5AW53,TrEMBL:B9RYS1,TrEMBL:B9T3L9;Derives_from=GSCOCT00028596001;Name=Cc01_g05100;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Serine/threonine-protein kinase WNK8,CC_functional_completeness:fragment,CC_gene:WNK8,CC_gene:WNK6,CC_gene:WNK7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028596001~ Serine/threonine-protein kinase WNK8~ WNK8~ fragment;original_location=complement(2051041..2051520);owner=coffea | |
| 6121 chr1 manual_curation exon 18753896 18754375 . - . Parent=GSCOCT00028596001 | |
| 6122 chr1 manual_curation CDS 18753896 18754375 . - 0 Parent=GSCOCT00028596001 | |
| 6123 chr1 manual_curation gene 18854739 18865231 . - . ID=GSCOCG00028601001;Name=Cc01_g05110 | |
| 6124 chr1 manual_curation mRNA 18854739 18865231 . - . ID=GSCOCT00028601001;Parent=GSCOCG00028601001;Name=Cc01_g05110 | |
| 6125 chr1 manual_curation polypeptide 18854776 18863176 . - . ID=GSCOCP00028601001;Dbxref=InterPro:IPR004827,InterPro:IPR011616,PFAM:PF00170,PROFILE:PS50217,PROSITE:PS00036,SMART:SM00338,SwissProt:O24160,SwissProt:P23923,SwissProt:Q41558,TAIR:AT3G12250.4,TAIR:AT5G06950.1,TAIR:AT5G06960.1,TrEMBL:B9RG75,TrEMBL:Q93XA1,TrEMBL:Q9SQK1;Derives_from=GSCOCT00028601001;Name=Cc01_g05110;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0043565,GO:0046983,CC_EC_number:missing_EC_number,PRODUCT:Transcription factor HBP-1b(c1) (Fragment),CC_functional_completeness:fragment,CC_gene:TGA21;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028601001~ Transcription factor HBP-1b(c1) (Fragment)~ TGA21~ fragment;original_location=complement(join(2160256..2160321%2C2160037..2160102%2C2159893..2159952%2C2158762..2158839%2C2158622..2158673%2C2157634..2157905%2C2154641..2154889%2C2151921..2152067));owner=coffea | |
| 6126 chr1 manual_curation exon 18864970 18865231 . - . Parent=GSCOCT00028601001 | |
| 6127 chr1 manual_curation exon 18854739 18854922 . - . Parent=GSCOCT00028601001 | |
| 6128 chr1 manual_curation exon 18857496 18857744 . - . Parent=GSCOCT00028601001 | |
| 6129 chr1 manual_curation exon 18860489 18860760 . - . Parent=GSCOCT00028601001 | |
| 6130 chr1 manual_curation exon 18861477 18861528 . - . Parent=GSCOCT00028601001 | |
| 6131 chr1 manual_curation exon 18861617 18861694 . - . Parent=GSCOCT00028601001 | |
| 6132 chr1 manual_curation exon 18862748 18862807 . - . Parent=GSCOCT00028601001 | |
| 6133 chr1 manual_curation exon 18862892 18862957 . - . Parent=GSCOCT00028601001 | |
| 6134 chr1 manual_curation exon 18863111 18863282 . - . Parent=GSCOCT00028601001 | |
| 6135 chr1 manual_curation CDS 18854776 18854922 . - 0 Parent=GSCOCT00028601001 | |
| 6136 chr1 manual_curation CDS 18857496 18857744 . - 0 Parent=GSCOCT00028601001 | |
| 6137 chr1 manual_curation CDS 18860489 18860760 . - 1 Parent=GSCOCT00028601001 | |
| 6138 chr1 manual_curation CDS 18861477 18861528 . - 0 Parent=GSCOCT00028601001 | |
| 6139 chr1 manual_curation CDS 18861617 18861694 . - 0 Parent=GSCOCT00028601001 | |
| 6140 chr1 manual_curation CDS 18862748 18862807 . - 0 Parent=GSCOCT00028601001 | |
| 6141 chr1 manual_curation CDS 18862892 18862957 . - 0 Parent=GSCOCT00028601001 | |
| 6142 chr1 manual_curation CDS 18863111 18863176 . - 0 Parent=GSCOCT00028601001 | |
| 6143 chr1 manual_curation gene 19307281 19308296 . - . ID=GSCOCG00028606001;Name=Cc01_g05120 | |
| 6144 chr1 manual_curation mRNA 19307281 19308296 . - . ID=GSCOCT00028606001;Parent=GSCOCG00028606001;Name=Cc01_g05120 | |
| 6145 chr1 manual_curation polypeptide 19307281 19308296 . - . ID=GSCOCP00028606001;Dbxref=InterPro:IPR000823,InterPro:IPR002016,InterPro:IPR010255,InterPro:IPR019793,PFAM:PF00141,PRINTS:PR00458,PRINTS:PR00461,PROFILE:PS50873,PROSITE:PS00435,SUPERFAMILY:SSF48113,SwissProt:P0DI10,SwissProt:Q67Z07,SwissProt:Q9ZV04,TAIR:AT1G05240.1,TAIR:AT1G05250.1,TAIR:AT2G39040.1,TrEMBL:A5HMU7,TrEMBL:A5HSH6,TrEMBL:B9S3Y5;Derives_from=GSCOCT00028606001;Name=Cc01_g05120;Ontology_term=CC_evidence_code:ISS,GO:0004601,GO:0006979,GO:0020037,GO:0055114,CC_EC_number:1.11.1.7,PRODUCT:Peroxidase 2,CC_functional_completeness:fragment,CC_gene:PER2,CC_gene:PER1,CC_gene:PER24;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028606001~ Peroxidase 2~ PER2~ fragment;original_location=complement(join(2605310..2605441%2C2605169..2605258%2C2604689..2604854%2C2604426..2604592));owner=coffea | |
| 6146 chr1 manual_curation exon 19307281 19307447 . - . Parent=GSCOCT00028606001 | |
| 6147 chr1 manual_curation exon 19307544 19307709 . - . Parent=GSCOCT00028606001 | |
| 6148 chr1 manual_curation exon 19308024 19308113 . - . Parent=GSCOCT00028606001 | |
| 6149 chr1 manual_curation exon 19308165 19308296 . - . Parent=GSCOCT00028606001 | |
| 6150 chr1 manual_curation CDS 19307281 19307447 . - 1 Parent=GSCOCT00028606001 | |
| 6151 chr1 manual_curation CDS 19307544 19307709 . - 0 Parent=GSCOCT00028606001 | |
| 6152 chr1 manual_curation CDS 19308024 19308113 . - 0 Parent=GSCOCT00028606001 | |
| 6153 chr1 manual_curation CDS 19308165 19308296 . - 0 Parent=GSCOCT00028606001 | |
| 6154 chr1 manual_curation gene 19322473 19324020 . - . ID=GSCOCG00028608001;Name=Cc01_g05130 | |
| 6155 chr1 manual_curation mRNA 19322473 19324020 . - . ID=GSCOCT00028608001;Parent=GSCOCG00028608001;Name=Cc01_g05130 | |
| 6156 chr1 manual_curation polypeptide 19322473 19324020 . - . ID=GSCOCP00028608001;Dbxref=InterPro:IPR000823,InterPro:IPR002016,InterPro:IPR010255,PFAM:PF00141,PRINTS:PR00458,PRINTS:PR00461,PROFILE:PS50873,SUPERFAMILY:SSF48113,SwissProt:P0DI10,SwissProt:Q67Z07,SwissProt:Q9ZV04,TAIR:AT1G05240.1,TAIR:AT1G05250.1,TAIR:AT2G39040.1,TrEMBL:D7TP57,TrEMBL:I1JFF0,TrEMBL:I1L7Z5;Derives_from=GSCOCT00028608001;Name=Cc01_g05130;Ontology_term=CC_evidence_code:ISS,GO:0004601,GO:0006979,GO:0020037,GO:0055114,CC_EC_number:1.11.1.7,PRODUCT:Peroxidase 24,CC_functional_completeness:fragment,CC_gene:PER24,CC_gene:PER2,CC_gene:PER1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028608001~ Peroxidase 24~ PER24~ fragment;original_location=complement(join(2621139..2621165%2C2620477..2620668%2C2620144..2620309%2C2619618..2620033));owner=coffea | |
| 6157 chr1 manual_curation exon 19322473 19322888 . - . Parent=GSCOCT00028608001 | |
| 6158 chr1 manual_curation exon 19322999 19323164 . - . Parent=GSCOCT00028608001 | |
| 6159 chr1 manual_curation exon 19323332 19323523 . - . Parent=GSCOCT00028608001 | |
| 6160 chr1 manual_curation exon 19323994 19324020 . - . Parent=GSCOCT00028608001 | |
| 6161 chr1 manual_curation CDS 19322473 19322888 . - 1 Parent=GSCOCT00028608001 | |
| 6162 chr1 manual_curation CDS 19322999 19323164 . - 0 Parent=GSCOCT00028608001 | |
| 6163 chr1 manual_curation CDS 19323332 19323523 . - 0 Parent=GSCOCT00028608001 | |
| 6164 chr1 manual_curation CDS 19323994 19324020 . - 0 Parent=GSCOCT00028608001 | |
| 6165 chr1 manual_curation gene 19488604 19489788 . - . ID=GSCOCG00011477001;Name=Cc01_g05140 | |
| 6166 chr1 manual_curation mRNA 19488604 19489788 . - . ID=GSCOCT00011477001;Parent=GSCOCG00011477001;Name=Cc01_g05140 | |
| 6167 chr1 manual_curation polypeptide 19488604 19489788 . - . ID=GSCOCP00011477001;Dbxref=InterPro:IPR005804,PFAM:PF00487,SwissProt:P46313,SwissProt:P48630,SwissProt:P48631,TAIR:AT2G29980.1,TAIR:AT3G11170.1,TAIR:AT3G12120.1,TrEMBL:D2CM01,TrEMBL:Q4QWZ1,TrEMBL:Q6DMQ8;Derives_from=GSCOCT00011477001;Name=Cc01_g05140;Ontology_term=CC_evidence_code:ISS,GO:0006629,GO:0016491,GO:0055114,CC_EC_number:1.14.99.33,PRODUCT:Omega-6 fatty acid desaturase%2C endoplasmic reticulum isozyme 2,CC_functional_completeness:fragment,CC_gene:FAD2-2,CC_gene:FAD2-1,CC_gene:FAD2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011477001~ Omega-6 fatty acid desaturase%2C endoplasmic reticulum isozyme 2~ FAD2-2~ fragment;original_location=join(623492..623545%2C623621..623647%2C623799..624129%2C624264..624676);owner=coffea | |
| 6168 chr1 manual_curation exon 19489735 19489788 . - . Parent=GSCOCT00011477001 | |
| 6169 chr1 manual_curation exon 19489633 19489659 . - . Parent=GSCOCT00011477001 | |
| 6170 chr1 manual_curation exon 19489151 19489481 . - . Parent=GSCOCT00011477001 | |
| 6171 chr1 manual_curation exon 19488604 19489016 . - . Parent=GSCOCT00011477001 | |
| 6172 chr1 manual_curation CDS 19489735 19489788 . - 0 Parent=GSCOCT00011477001 | |
| 6173 chr1 manual_curation CDS 19489633 19489659 . - 0 Parent=GSCOCT00011477001 | |
| 6174 chr1 manual_curation CDS 19489151 19489481 . - 0 Parent=GSCOCT00011477001 | |
| 6175 chr1 manual_curation CDS 19488604 19489016 . - 1 Parent=GSCOCT00011477001 | |
| 6176 chr1 manual_curation gene 19497467 19499816 . - . ID=GSCOCG00011475001;Name=Cc01_g05150 | |
| 6177 chr1 manual_curation mRNA 19497467 19499816 . - . ID=GSCOCT00011475001;Parent=GSCOCG00011475001;Name=Cc01_g05150 | |
| 6178 chr1 manual_curation polypeptide 19497793 19499816 . - . ID=GSCOCP00011475001;Dbxref=GENE3D:G3DSA:2.60.120.10,InterPro:IPR000526,InterPro:IPR011051,InterPro:IPR014710,PFAM:PF02041,PRINTS:PR00655,SUPERFAMILY:SSF51182,SwissProt:P33487,SwissProt:P33490,SwissProt:P33491,TAIR:AT4G02980.1,TrEMBL:B5TGQ0,TrEMBL:B6VB01,TrEMBL:Q39457;Derives_from=GSCOCT00011475001;Name=Cc01_g05150;Ontology_term=CC_evidence_code:ISS,GO:0004872,GO:0005788,CC_EC_number:missing_EC_number,PRODUCT:Auxin-binding protein T85,CC_functional_completeness:complete,CC_gene:T85,CC_gene:T92,CC_gene:ERABP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011475001~ Auxin-binding protein T85~ T85~ complete;original_location=join(613464..613578%2C613652..613758%2C613868..614071%2C614537..614604%2C615379..615487);owner=coffea | |
| 6179 chr1 manual_curation exon 19499702 19499816 . - . Parent=GSCOCT00011475001 | |
| 6180 chr1 manual_curation exon 19499522 19499628 . - . Parent=GSCOCT00011475001 | |
| 6181 chr1 manual_curation exon 19499209 19499412 . - . Parent=GSCOCT00011475001 | |
| 6182 chr1 manual_curation exon 19498676 19498743 . - . Parent=GSCOCT00011475001 | |
| 6183 chr1 manual_curation exon 19497467 19497901 . - . Parent=GSCOCT00011475001 | |
| 6184 chr1 manual_curation CDS 19499702 19499816 . - 0 Parent=GSCOCT00011475001 | |
| 6185 chr1 manual_curation CDS 19499522 19499628 . - 1 Parent=GSCOCT00011475001 | |
| 6186 chr1 manual_curation CDS 19499209 19499412 . - 0 Parent=GSCOCT00011475001 | |
| 6187 chr1 manual_curation CDS 19498676 19498743 . - 0 Parent=GSCOCT00011475001 | |
| 6188 chr1 manual_curation CDS 19497793 19497901 . - 2 Parent=GSCOCT00011475001 | |
| 6189 chr1 manual_curation gene 19533095 19535391 . - . ID=GSCOCG00011474001;Name=Cc01_g05160 | |
| 6190 chr1 manual_curation mRNA 19533095 19535391 . - . ID=GSCOCT00011474001;Parent=GSCOCG00011474001;Name=Cc01_g05160 | |
| 6191 chr1 manual_curation polypeptide 19533095 19535391 . - . ID=GSCOCP00011474001;Dbxref=InterPro:IPR003480,PFAM:PF02458,SwissProt:Q5H873,SwissProt:Q8GT20,SwissProt:Q8GT21,TAIR:AT3G03480.1,TAIR:AT5G17540.1,TAIR:AT5G41040.1,TrEMBL:B9GZG2,TrEMBL:F6HBX5,TrEMBL:Q6E593;Derives_from=GSCOCT00011474001;Name=Cc01_g05160;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.3.1.162,PRODUCT:Putative Benzyl alcohol O-benzoyltransferase,CC_functional_completeness:complete,CC_gene:HSR201,CC_gene:HMT/HLT;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011474001~ Putative Benzyl alcohol O-benzoyltransferase~ HSR201~ complete;original_location=join(577889..578320%2C579238..580185);owner=coffea | |
| 6192 chr1 manual_curation exon 19534960 19535391 . - . Parent=GSCOCT00011474001 | |
| 6193 chr1 manual_curation exon 19533095 19534042 . - . Parent=GSCOCT00011474001 | |
| 6194 chr1 manual_curation CDS 19534960 19535391 . - 0 Parent=GSCOCT00011474001 | |
| 6195 chr1 manual_curation CDS 19533095 19534042 . - 0 Parent=GSCOCT00011474001 | |
| 6196 chr1 manual_curation gene 19542377 19543692 . - . ID=GSCOCG00011473001;Name=Cc01_g05170 | |
| 6197 chr1 manual_curation mRNA 19542377 19543692 . - . ID=GSCOCT00011473001;Parent=GSCOCG00011473001;Name=Cc01_g05170 | |
| 6198 chr1 manual_curation polypeptide 19542547 19543692 . - . ID=GSCOCP00011473001;Dbxref=InterPro:IPR005804,InterPro:IPR021863,PFAM:PF00487,PFAM:PF11960,SwissProt:P46313,SwissProt:P48630,SwissProt:P48631,TAIR:AT3G11170.1,TAIR:AT3G12120.1,TAIR:AT5G05580.1,TrEMBL:D2CM01,TrEMBL:F2YFG0,TrEMBL:Q4QWZ1;Derives_from=GSCOCT00011473001;Name=Cc01_g05170;Ontology_term=CC_evidence_code:ISS,GO:0006629,GO:0016491,GO:0055114,CC_EC_number:1.14.99.33,PRODUCT:Omega-6 fatty acid desaturase%2C endoplasmic reticulum isozyme 2,CC_functional_completeness:complete,CC_gene:FAD2-2,CC_gene:FAD2-1,CC_gene:FAD2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011473001~ Omega-6 fatty acid desaturase%2C endoplasmic reticulum isozyme 2~ FAD2-2~ complete;original_location=569588..570733;owner=coffea | |
| 6199 chr1 manual_curation exon 19542377 19543692 . - . Parent=GSCOCT00011473001 | |
| 6200 chr1 manual_curation CDS 19542547 19543692 . - 0 Parent=GSCOCT00011473001 | |
| 6201 chr1 manual_curation gene 19601396 19606469 . - . ID=GSCOCG00011472001;Name=Cc01_g05180 | |
| 6202 chr1 manual_curation mRNA 19601396 19606469 . - . ID=GSCOCT00011472001;Parent=GSCOCG00011472001;Name=Cc01_g05180 | |
| 6203 chr1 manual_curation polypeptide 19601616 19602761 . - . ID=GSCOCP00011472001;Dbxref=InterPro:IPR005804,InterPro:IPR021863,PFAM:PF00487,PFAM:PF11960,SwissProt:P46313,SwissProt:P48630,SwissProt:P48631,TAIR:AT2G29980.1,TAIR:AT3G11170.1,TAIR:AT3G12120.1,TrEMBL:D2CM01,TrEMBL:F2YFG0,TrEMBL:Q4QWZ1;Derives_from=GSCOCT00011472001;Name=Cc01_g05180;Ontology_term=CC_evidence_code:ISS,GO:0006629,GO:0016491,GO:0055114,CC_EC_number:1.14.99.33,PRODUCT:Omega-6 fatty acid desaturase%2C endoplasmic reticulum isozyme 2,CC_functional_completeness:complete,CC_gene:FAD2-2,CC_gene:FAD2,CC_gene:FAD2-1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011472001~ Omega-6 fatty acid desaturase%2C endoplasmic reticulum isozyme 2~ FAD2-2~ complete;original_location=510519..511664;owner=coffea | |
| 6204 chr1 manual_curation exon 19606344 19606469 . - . Parent=GSCOCT00011472001 | |
| 6205 chr1 manual_curation exon 19601396 19602797 . - . Parent=GSCOCT00011472001 | |
| 6206 chr1 manual_curation CDS 19601616 19602761 . - 0 Parent=GSCOCT00011472001 | |
| 6207 chr1 manual_curation gene 19702468 19708063 . + . ID=GSCOCG00011466001;Name=Cc01_g05190 | |
| 6208 chr1 manual_curation mRNA 19702468 19708063 . + . ID=GSCOCT00011466001;Parent=GSCOCG00011466001;Name=Cc01_g05190 | |
| 6209 chr1 manual_curation polypeptide 19702732 19708063 . + . ID=GSCOCP00011466001;Dbxref=SwissProt:Q9FG30,TAIR:AT3G12130.1,TAIR:AT5G06770.1,TrEMBL:F6GUE5;Derives_from=GSCOCT00011466001;Name=Cc01_g05190;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Zinc finger CCCH domain-containing protein 52,CC_functional_completeness:fragment,CC_gene:At5g06770;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011466001~ Zinc finger CCCH domain-containing protein 52~ At5g06770~ fragment;original_location=complement(join(410461..410548%2C409032..409092%2C405217..405235));owner=coffea | |
| 6210 chr1 manual_curation exon 19708045 19708063 . + . Parent=GSCOCT00011466001 | |
| 6211 chr1 manual_curation exon 19704188 19704248 . + . Parent=GSCOCT00011466001 | |
| 6212 chr1 manual_curation exon 19702468 19702819 . + . Parent=GSCOCT00011466001 | |
| 6213 chr1 manual_curation CDS 19708045 19708063 . + 2 Parent=GSCOCT00011466001 | |
| 6214 chr1 manual_curation CDS 19704188 19704248 . + 1 Parent=GSCOCT00011466001 | |
| 6215 chr1 manual_curation CDS 19702732 19702819 . + 0 Parent=GSCOCT00011466001 | |
| 6216 chr1 manual_curation gene 19708131 19721249 . + . ID=GSCOCG00011465001;Name=Cc01_g05200 | |
| 6217 chr1 manual_curation mRNA 19708131 19721249 . + . ID=GSCOCT00011465001;Parent=GSCOCG00011465001;Name=Cc01_g05200 | |
| 6218 chr1 manual_curation polypeptide 19708131 19720990 . + . ID=GSCOCP00011465001;Dbxref=InterPro:IPR005343,PANTHER:PTHR12687,PFAM:PF03715,SwissProt:Q3SYU1,SwissProt:Q8LNU5,SwissProt:Q9ZPV5,TAIR:AT2G18220.1,TAIR:AT3G55510.1,TrEMBL:A5C1R0,TrEMBL:B9RUF4,TrEMBL:D7T1D9;Derives_from=GSCOCT00011465001;Name=Cc01_g05200;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Nucleolar complex protein 2 homolog,CC_functional_completeness:complete,CC_gene:At2g18220,CC_gene:Os10g0495500,CC_gene:NOC2L;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011465001~ Nucleolar complex protein 2 homolog~ At2g18220~ complete;original_location=complement(join(405120..405149%2C402829..402900%2C402186..402746%2C400497..400799%2C394295..394645%2C394003..394209%2C393770..393856%2C392917..393011%2C392705..392833%2C392290..392566));owner=coffea | |
| 6219 chr1 manual_curation exon 19720714 19721249 . + . Parent=GSCOCT00011465001 | |
| 6220 chr1 manual_curation exon 19720447 19720575 . + . Parent=GSCOCT00011465001 | |
| 6221 chr1 manual_curation exon 19720269 19720363 . + . Parent=GSCOCT00011465001 | |
| 6222 chr1 manual_curation exon 19719424 19719510 . + . Parent=GSCOCT00011465001 | |
| 6223 chr1 manual_curation exon 19719071 19719277 . + . Parent=GSCOCT00011465001 | |
| 6224 chr1 manual_curation exon 19718635 19718985 . + . Parent=GSCOCT00011465001 | |
| 6225 chr1 manual_curation exon 19712481 19712783 . + . Parent=GSCOCT00011465001 | |
| 6226 chr1 manual_curation exon 19710534 19711094 . + . Parent=GSCOCT00011465001 | |
| 6227 chr1 manual_curation exon 19710380 19710451 . + . Parent=GSCOCT00011465001 | |
| 6228 chr1 manual_curation exon 19708131 19708160 . + . Parent=GSCOCT00011465001 | |
| 6229 chr1 manual_curation CDS 19720714 19720990 . + 2 Parent=GSCOCT00011465001 | |
| 6230 chr1 manual_curation CDS 19720447 19720575 . + 2 Parent=GSCOCT00011465001 | |
| 6231 chr1 manual_curation CDS 19720269 19720363 . + 0 Parent=GSCOCT00011465001 | |
| 6232 chr1 manual_curation CDS 19719424 19719510 . + 0 Parent=GSCOCT00011465001 | |
| 6233 chr1 manual_curation CDS 19719071 19719277 . + 0 Parent=GSCOCT00011465001 | |
| 6234 chr1 manual_curation CDS 19718635 19718985 . + 0 Parent=GSCOCT00011465001 | |
| 6235 chr1 manual_curation CDS 19712481 19712783 . + 0 Parent=GSCOCT00011465001 | |
| 6236 chr1 manual_curation CDS 19710534 19711094 . + 0 Parent=GSCOCT00011465001 | |
| 6237 chr1 manual_curation CDS 19710380 19710451 . + 0 Parent=GSCOCT00011465001 | |
| 6238 chr1 manual_curation CDS 19708131 19708160 . + 0 Parent=GSCOCT00011465001 | |
| 6239 chr1 manual_curation gene 19735105 19736606 . - . ID=GSCOCG00011463001;Name=Cc01_g05210 | |
| 6240 chr1 manual_curation mRNA 19735105 19736606 . - . ID=GSCOCT00011463001;Parent=GSCOCG00011463001;Name=Cc01_g05210 | |
| 6241 chr1 manual_curation polypeptide 19736114 19736606 . - . ID=GSCOCP00011463001;Derives_from=GSCOCT00011463001;Name=Cc01_g05210;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011463001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(376674..376863%2C377156..377166);owner=coffea | |
| 6242 chr1 manual_curation exon 19735412 19735845 . - . Parent=GSCOCT00011463001 | |
| 6243 chr1 manual_curation exon 19735105 19735221 . - . Parent=GSCOCT00011463001 | |
| 6244 chr1 manual_curation exon 19736417 19736606 . - . Parent=GSCOCT00011463001 | |
| 6245 chr1 manual_curation exon 19736015 19736124 . - . Parent=GSCOCT00011463001 | |
| 6246 chr1 manual_curation CDS 19736417 19736606 . - 0 Parent=GSCOCT00011463001 | |
| 6247 chr1 manual_curation CDS 19736114 19736124 . - 1 Parent=GSCOCT00011463001 | |
| 6248 chr1 manual_curation gene 19737175 19740882 . - . ID=GSCOCG00011461001;Name=Cc01_g05220 | |
| 6249 chr1 manual_curation mRNA 19737175 19740882 . - . ID=GSCOCT00011461001;Parent=GSCOCG00011461001;Name=Cc01_g05220 | |
| 6250 chr1 manual_curation polypeptide 19737175 19740882 . - . ID=GSCOCP00011461001;Dbxref=InterPro:IPR000767,InterPro:IPR001611,InterPro:IPR002182,PFAM:PF00560,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q7XA40,SwissProt:Q7XA42,SwissProt:Q7XBQ9,TAIR:AT1G59780.1,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TrEMBL:B9NBC0,TrEMBL:B9NED8,TrEMBL:Q19PN6;Derives_from=GSCOCT00011461001;Name=Cc01_g05220;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance protein RGA3,CC_functional_completeness:complete,CC_gene:RGA3,CC_gene:RGA2,CC_gene:RGA1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011461001~ Putative disease resistance protein RGA3~ RGA3~ complete;original_location=join(372398..372809%2C372870..374792%2C374832..375090%2C375169..375656%2C375711..376105);owner=coffea | |
| 6251 chr1 manual_curation exon 19740471 19740882 . - . Parent=GSCOCT00011461001 | |
| 6252 chr1 manual_curation exon 19738488 19740410 . - . Parent=GSCOCT00011461001 | |
| 6253 chr1 manual_curation exon 19738190 19738448 . - . Parent=GSCOCT00011461001 | |
| 6254 chr1 manual_curation exon 19737624 19738111 . - . Parent=GSCOCT00011461001 | |
| 6255 chr1 manual_curation exon 19737175 19737569 . - . Parent=GSCOCT00011461001 | |
| 6256 chr1 manual_curation CDS 19740471 19740882 . - 0 Parent=GSCOCT00011461001 | |
| 6257 chr1 manual_curation CDS 19738488 19740410 . - 1 Parent=GSCOCT00011461001 | |
| 6258 chr1 manual_curation CDS 19738190 19738448 . - 1 Parent=GSCOCT00011461001 | |
| 6259 chr1 manual_curation CDS 19737624 19738111 . - 2 Parent=GSCOCT00011461001 | |
| 6260 chr1 manual_curation CDS 19737175 19737569 . - 1 Parent=GSCOCT00011461001 | |
| 6261 chr1 manual_curation gene 19809469 19813125 . - . ID=GSCOCG00011456001;Name=Cc01_g05230 | |
| 6262 chr1 manual_curation mRNA 19809469 19813125 . - . ID=GSCOCT00011456001;Parent=GSCOCG00011456001;Name=Cc01_g05230 | |
| 6263 chr1 manual_curation polypeptide 19809469 19813125 . - . ID=GSCOCP00011456001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q7XA39,SwissProt:Q7XA40,SwissProt:Q7XBQ9,TAIR:AT1G59218.1,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TrEMBL:B9NBB7,TrEMBL:B9NBC0,TrEMBL:Q19PN6;Derives_from=GSCOCT00011456001;Name=Cc01_g05230;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance protein RGA3,CC_functional_completeness:complete,CC_gene:RGA3,CC_gene:RGA2,CC_gene:RGA4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011456001~ Putative disease resistance protein RGA3~ RGA3~ complete;original_location=join(300155..301358%2C301479..302528%2C302568..302779%2C302930..303409%2C303536..303811);owner=coffea | |
| 6264 chr1 manual_curation exon 19811922 19813125 . - . Parent=GSCOCT00011456001 | |
| 6265 chr1 manual_curation exon 19810752 19811801 . - . Parent=GSCOCT00011456001 | |
| 6266 chr1 manual_curation exon 19810501 19810712 . - . Parent=GSCOCT00011456001 | |
| 6267 chr1 manual_curation exon 19809871 19810350 . - . Parent=GSCOCT00011456001 | |
| 6268 chr1 manual_curation exon 19809469 19809744 . - . Parent=GSCOCT00011456001 | |
| 6269 chr1 manual_curation CDS 19811922 19813125 . - 0 Parent=GSCOCT00011456001 | |
| 6270 chr1 manual_curation CDS 19810752 19811801 . - 1 Parent=GSCOCT00011456001 | |
| 6271 chr1 manual_curation CDS 19810501 19810712 . - 1 Parent=GSCOCT00011456001 | |
| 6272 chr1 manual_curation CDS 19809871 19810350 . - 0 Parent=GSCOCT00011456001 | |
| 6273 chr1 manual_curation CDS 19809469 19809744 . - 0 Parent=GSCOCT00011456001 | |
| 6274 chr1 manual_curation gene 19871169 19874690 . - . ID=GSCOCG00011454001;Name=Cc01_g05240 | |
| 6275 chr1 manual_curation mRNA 19871169 19874690 . - . ID=GSCOCT00011454001;Parent=GSCOCG00011454001;Name=Cc01_g05240 | |
| 6276 chr1 manual_curation polypeptide 19871169 19874690 . - . ID=GSCOCP00011454001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q7XA40,SwissProt:Q7XA42,SwissProt:Q7XBQ9,TAIR:AT1G59218.1,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TrEMBL:B9NBC0,TrEMBL:B9NED8,TrEMBL:Q19PN6;Derives_from=GSCOCT00011454001;Name=Cc01_g05240;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance protein RGA3,CC_functional_completeness:complete,CC_gene:RGA3,CC_gene:RGA2,CC_gene:RGA1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011454001~ Putative disease resistance protein RGA3~ RGA3~ complete;original_location=join(238590..239219%2C239361..241092%2C241234..241465%2C241535..242111);owner=coffea | |
| 6277 chr1 manual_curation exon 19874061 19874690 . - . Parent=GSCOCT00011454001 | |
| 6278 chr1 manual_curation exon 19872188 19873919 . - . Parent=GSCOCT00011454001 | |
| 6279 chr1 manual_curation exon 19871815 19872046 . - . Parent=GSCOCT00011454001 | |
| 6280 chr1 manual_curation exon 19871169 19871745 . - . Parent=GSCOCT00011454001 | |
| 6281 chr1 manual_curation CDS 19874061 19874690 . - 0 Parent=GSCOCT00011454001 | |
| 6282 chr1 manual_curation CDS 19872188 19873919 . - 0 Parent=GSCOCT00011454001 | |
| 6283 chr1 manual_curation CDS 19871815 19872046 . - 1 Parent=GSCOCT00011454001 | |
| 6284 chr1 manual_curation CDS 19871169 19871745 . - 2 Parent=GSCOCT00011454001 | |
| 6285 chr1 manual_curation gene 19906445 19908430 . - . ID=GSCOCG00011453001;Name=Cc01_g05250 | |
| 6286 chr1 manual_curation mRNA 19906445 19908430 . - . ID=GSCOCT00011453001;Parent=GSCOCG00011453001;Name=Cc01_g05250 | |
| 6287 chr1 manual_curation polypeptide 19908146 19908430 . - . ID=GSCOCP00011453001;Dbxref=SwissProt:P04146,TrEMBL:A5BKG5,TrEMBL:A5BQE6,TrEMBL:A5C1T0;Derives_from=GSCOCT00011453001;Name=Cc01_g05250;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Copia protein,CC_functional_completeness:fragment,CC_gene:GIP;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011453001~ Putative Copia protein~ GIP~ fragment;original_location=204850..205134;owner=coffea | |
| 6288 chr1 manual_curation exon 19907285 19907622 . - . Parent=GSCOCT00011453001 | |
| 6289 chr1 manual_curation exon 19906445 19906525 . - . Parent=GSCOCT00011453001 | |
| 6290 chr1 manual_curation exon 19907887 19908430 . - . Parent=GSCOCT00011453001 | |
| 6291 chr1 manual_curation CDS 19908146 19908430 . - 0 Parent=GSCOCT00011453001 | |
| 6292 chr1 manual_curation gene 19913532 19914145 . - . ID=GSCOCG00011451001;Name=Cc01_g05260 | |
| 6293 chr1 manual_curation mRNA 19913532 19914145 . - . ID=GSCOCT00011451001;Parent=GSCOCG00011451001;Name=Cc01_g05260 | |
| 6294 chr1 manual_curation polypeptide 19913532 19914145 . - . ID=GSCOCP00011451001;Derives_from=GSCOCT00011451001;Name=Cc01_g05260;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011451001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(199135..199316%2C199715..199748);owner=coffea | |
| 6295 chr1 manual_curation exon 19913964 19914145 . - . Parent=GSCOCT00011451001 | |
| 6296 chr1 manual_curation exon 19913532 19913565 . - . Parent=GSCOCT00011451001 | |
| 6297 chr1 manual_curation CDS 19913964 19914145 . - 0 Parent=GSCOCT00011451001 | |
| 6298 chr1 manual_curation CDS 19913532 19913565 . - 2 Parent=GSCOCT00011451001 | |
| 6299 chr1 manual_curation gene 19914919 19918453 . - . ID=GSCOCG00011450001;Name=Cc01_g05270 | |
| 6300 chr1 manual_curation mRNA 19914919 19918453 . - . ID=GSCOCT00011450001;Parent=GSCOCG00011450001;Name=Cc01_g05270 | |
| 6301 chr1 manual_curation polypeptide 19914919 19918453 . - . ID=GSCOCP00011450001;Dbxref=InterPro:IPR000767,InterPro:IPR001611,InterPro:IPR002182,PFAM:PF00560,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q7XA40,SwissProt:Q7XA42,SwissProt:Q7XBQ9,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TAIR:AT3G46710.1,TrEMBL:B9NBB7,TrEMBL:B9NBC0,TrEMBL:Q19PN6;Derives_from=GSCOCT00011450001;Name=Cc01_g05270;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative Disease resistance protein RGA2,CC_functional_completeness:complete,CC_gene:RGA2,CC_gene:RGA3,CC_gene:RGA1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011450001~ Putative Disease resistance protein RGA2~ RGA2~ complete;original_location=join(194827..195238%2C195362..197212%2C197252..197407%2C197681..198031%2C198264..198361);owner=coffea | |
| 6302 chr1 manual_curation exon 19918042 19918453 . - . Parent=GSCOCT00011450001 | |
| 6303 chr1 manual_curation exon 19916068 19917918 . - . Parent=GSCOCT00011450001 | |
| 6304 chr1 manual_curation exon 19915873 19916028 . - . Parent=GSCOCT00011450001 | |
| 6305 chr1 manual_curation exon 19915249 19915599 . - . Parent=GSCOCT00011450001 | |
| 6306 chr1 manual_curation exon 19914919 19915016 . - . Parent=GSCOCT00011450001 | |
| 6307 chr1 manual_curation CDS 19918042 19918453 . - 0 Parent=GSCOCT00011450001 | |
| 6308 chr1 manual_curation CDS 19916068 19917918 . - 1 Parent=GSCOCT00011450001 | |
| 6309 chr1 manual_curation CDS 19915873 19916028 . - 1 Parent=GSCOCT00011450001 | |
| 6310 chr1 manual_curation CDS 19915249 19915599 . - 1 Parent=GSCOCT00011450001 | |
| 6311 chr1 manual_curation CDS 19914919 19915016 . - 1 Parent=GSCOCT00011450001 | |
| 6312 chr1 manual_curation gene 19945258 19948638 . - . ID=GSCOCG00011448001;Name=Cc01_g05280 | |
| 6313 chr1 manual_curation mRNA 19945258 19948638 . - . ID=GSCOCT00011448001;Parent=GSCOCG00011448001;Name=Cc01_g05280 | |
| 6314 chr1 manual_curation polypeptide 19945258 19948638 . - . ID=GSCOCP00011448001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q7XA39,SwissProt:Q7XA40,SwissProt:Q7XBQ9,TAIR:AT3G07040.1,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TrEMBL:B9NBB7,TrEMBL:B9NBC0,TrEMBL:B9NED8;Derives_from=GSCOCT00011448001;Name=Cc01_g05280;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative Disease resistance protein RGA2,CC_functional_completeness:complete,CC_gene:RGA2,CC_gene:RGA3,CC_gene:RGA4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011448001~ Putative Disease resistance protein RGA2~ RGA2~ complete;original_location=join(164642..164941%2C164975..167051%2C167118..167346%2C167413..168022);owner=coffea | |
| 6315 chr1 manual_curation exon 19948339 19948638 . - . Parent=GSCOCT00011448001 | |
| 6316 chr1 manual_curation exon 19946229 19948305 . - . Parent=GSCOCT00011448001 | |
| 6317 chr1 manual_curation exon 19945934 19946162 . - . Parent=GSCOCT00011448001 | |
| 6318 chr1 manual_curation exon 19945258 19945867 . - . Parent=GSCOCT00011448001 | |
| 6319 chr1 manual_curation CDS 19948339 19948638 . - 0 Parent=GSCOCT00011448001 | |
| 6320 chr1 manual_curation CDS 19946229 19948305 . - 0 Parent=GSCOCT00011448001 | |
| 6321 chr1 manual_curation CDS 19945934 19946162 . - 1 Parent=GSCOCT00011448001 | |
| 6322 chr1 manual_curation CDS 19945258 19945867 . - 2 Parent=GSCOCT00011448001 | |
| 6323 chr1 manual_curation gene 19962897 19963327 . + . ID=GSCOCG00011446001;Name=Cc01_g05290 | |
| 6324 chr1 manual_curation mRNA 19962897 19963327 . + . ID=GSCOCT00011446001;Parent=GSCOCG00011446001;Name=Cc01_g05290 | |
| 6325 chr1 manual_curation polypeptide 19962897 19963327 . + . ID=GSCOCP00011446001;Dbxref=InterPro:IPR011009,SUPERFAMILY:SSF56112,SwissProt:Q5XF57,SwissProt:Q8H1D6,SwissProt:Q8RXC8,TAIR:AT2G18890.1,TAIR:AT3G05140.1,TAIR:AT5G18910.1,TrEMBL:A5AIW4,TrEMBL:C6ZRQ1,TrEMBL:D7SQB5;Derives_from=GSCOCT00011446001;Name=Cc01_g05290;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:RBK2,CC_gene:At5g57670,CC_gene:RBK1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011446001~ Hypothetical protein~ RBK2~ missing_functional_completeness;original_location=complement(join(150270..150383%2C149953..150183));owner=coffea | |
| 6326 chr1 manual_curation exon 19963097 19963327 . + . Parent=GSCOCT00011446001 | |
| 6327 chr1 manual_curation exon 19962897 19963010 . + . Parent=GSCOCT00011446001 | |
| 6328 chr1 manual_curation CDS 19963097 19963327 . + 0 Parent=GSCOCT00011446001 | |
| 6329 chr1 manual_curation CDS 19962897 19963010 . + 0 Parent=GSCOCT00011446001 | |
| 6330 chr1 manual_curation gene 20039825 20040689 . + . ID=GSCOCG00011442001;Name=Cc01_g05300 | |
| 6331 chr1 manual_curation mRNA 20039825 20040689 . + . ID=GSCOCT00011442001;Parent=GSCOCG00011442001;Name=Cc01_g05300 | |
| 6332 chr1 manual_curation polypeptide 20039825 20040689 . + . ID=GSCOCP00011442001;Dbxref=InterPro:IPR002550,PFAM:PF01595,SwissProt:Q8RY60,SwissProt:Q8VZI2,SwissProt:Q9LTD8,TAIR:AT1G47330.1,TAIR:AT4G33700.1,TAIR:AT5G52790.1,TrEMBL:B9MX55,TrEMBL:B9RIS4,TrEMBL:D7MS84;Derives_from=GSCOCT00011442001;Name=Cc01_g05300;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:DUF21 domain-containing protein At5g52790,CC_functional_completeness:fragment,CC_gene:CBSDUF5,CC_gene:CBSDUF7,CC_gene:CBSDUF6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011442001~ DUF21 domain-containing protein At5g52790~ CBSDUF5~ fragment;original_location=complement(join(73362..73455%2C73158..73240%2C72837..72899%2C72591..72749));owner=coffea | |
| 6333 chr1 manual_curation exon 20040531 20040689 . + . Parent=GSCOCT00011442001 | |
| 6334 chr1 manual_curation exon 20040381 20040443 . + . Parent=GSCOCT00011442001 | |
| 6335 chr1 manual_curation exon 20040040 20040122 . + . Parent=GSCOCT00011442001 | |
| 6336 chr1 manual_curation exon 20039825 20039918 . + . Parent=GSCOCT00011442001 | |
| 6337 chr1 manual_curation CDS 20040531 20040689 . + 0 Parent=GSCOCT00011442001 | |
| 6338 chr1 manual_curation CDS 20040381 20040443 . + 0 Parent=GSCOCT00011442001 | |
| 6339 chr1 manual_curation CDS 20040040 20040122 . + 1 Parent=GSCOCT00011442001 | |
| 6340 chr1 manual_curation CDS 20039825 20039918 . + 0 Parent=GSCOCT00011442001 | |
| 6341 chr1 manual_curation gene 20050753 20053293 . + . ID=GSCOCG00011440001;Name=Cc01_g05310 | |
| 6342 chr1 manual_curation mRNA 20050753 20053293 . + . ID=GSCOCT00011440001;Parent=GSCOCG00011440001;Name=Cc01_g05310 | |
| 6343 chr1 manual_curation polypeptide 20050753 20052225 . + . ID=GSCOCP00011440001;Dbxref=InterPro:IPR000163,InterPro:IPR001107,PANTHER:PTHR23222,PFAM:PF01145,PRINTS:PR00679,SMART:SM00244,SwissProt:P84173,SwissProt:Q54GI9,SwissProt:Q9P7H3,TAIR:AT3G27280.2,TAIR:AT5G14300.1,TAIR:AT5G40770.1,TrEMBL:O04361,TrEMBL:Q45Q24,TrEMBL:Q5ECI7;Derives_from=GSCOCT00011440001;Name=Cc01_g05310;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative Band 7 protein,CC_functional_completeness:complete,CC_gene:phbA,CC_gene:phb1,CC_gene:PHB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011440001~ Putative Band 7 protein~ phbA~ complete;original_location=complement(join(62252..62527%2C61927..62197%2C61446..61581%2C61267..61340%2C61055..61161));owner=coffea | |
| 6344 chr1 manual_curation exon 20052119 20053293 . + . Parent=GSCOCT00011440001 | |
| 6345 chr1 manual_curation exon 20051940 20052013 . + . Parent=GSCOCT00011440001 | |
| 6346 chr1 manual_curation exon 20051699 20051834 . + . Parent=GSCOCT00011440001 | |
| 6347 chr1 manual_curation exon 20051083 20051353 . + . Parent=GSCOCT00011440001 | |
| 6348 chr1 manual_curation exon 20050753 20051028 . + . Parent=GSCOCT00011440001 | |
| 6349 chr1 manual_curation CDS 20052119 20052225 . + 1 Parent=GSCOCT00011440001 | |
| 6350 chr1 manual_curation CDS 20051940 20052013 . + 2 Parent=GSCOCT00011440001 | |
| 6351 chr1 manual_curation CDS 20051699 20051834 . + 1 Parent=GSCOCT00011440001 | |
| 6352 chr1 manual_curation CDS 20051083 20051353 . + 0 Parent=GSCOCT00011440001 | |
| 6353 chr1 manual_curation CDS 20050753 20051028 . + 0 Parent=GSCOCT00011440001 | |
| 6354 chr1 manual_curation gene 20059323 20065708 . - . ID=GSCOCG00011438001;Name=Cc01_g05320 | |
| 6355 chr1 manual_curation mRNA 20059323 20065708 . - . ID=GSCOCT00011438001;Parent=GSCOCG00011438001;Name=Cc01_g05320 | |
| 6356 chr1 manual_curation polypeptide 20059584 20065541 . - . ID=GSCOCP00011438001;Dbxref=InterPro:IPR000571,InterPro:IPR004087,InterPro:IPR004088,InterPro:IPR018111,PFAM:PF00013,PFAM:PF00642,PROFILE:PS50084,PROFILE:PS50103,SMART:SM00322,SMART:SM00356,SwissProt:Q69XQ3,SwissProt:Q7F8R0,SwissProt:Q7XPK1,TAIR:AT3G12130.1,TAIR:AT5G06770.1,TrEMBL:B9GLM3,TrEMBL:C6TA41,TrEMBL:F6GUE5;Derives_from=GSCOCT00011438001;Name=Cc01_g05320;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0003723,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Zinc finger CCCH domain-containing protein 14,CC_functional_completeness:complete,CC_gene:Os02g0194200,CC_gene:Os06g0618100,CC_gene:Os04g0665700;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011438001~ Zinc finger CCCH domain-containing protein 14~ Os02g0194200~ complete;original_location=join(47739..47826%2C49200..49260%2C52937..53696);owner=coffea | |
| 6357 chr1 manual_curation exon 20065454 20065708 . - . Parent=GSCOCT00011438001 | |
| 6358 chr1 manual_curation exon 20064020 20064080 . - . Parent=GSCOCT00011438001 | |
| 6359 chr1 manual_curation exon 20059323 20060343 . - . Parent=GSCOCT00011438001 | |
| 6360 chr1 manual_curation CDS 20065454 20065541 . - 0 Parent=GSCOCT00011438001 | |
| 6361 chr1 manual_curation CDS 20064020 20064080 . - 1 Parent=GSCOCT00011438001 | |
| 6362 chr1 manual_curation CDS 20059584 20060343 . - 2 Parent=GSCOCT00011438001 | |
| 6363 chr1 manual_curation gene 20074108 20077699 . - . ID=GSCOCG00011437001;Name=Cc01_g05330 | |
| 6364 chr1 manual_curation mRNA 20074108 20077699 . - . ID=GSCOCT00011437001;Parent=GSCOCG00011437001;Name=Cc01_g05330 | |
| 6365 chr1 manual_curation polypeptide 20074447 20077338 . - . ID=GSCOCP00011437001;Dbxref=InterPro:IPR000109,InterPro:IPR016196,PFAM:PF00854,SUPERFAMILY:SSF103473,SwissProt:Q3E9B5,SwissProt:Q8GXN2,SwissProt:Q9LQL2,TAIR:AT1G32450.1,TAIR:AT4G21680.1,TAIR:AT5G19640.1,TrEMBL:B9GLM5,TrEMBL:B9GYL3,TrEMBL:I1LFK2;Derives_from=GSCOCT00011437001;Name=Cc01_g05330;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006857,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative peptide/nitrate transporter At5g19640,CC_functional_completeness:complete,CC_gene:At5g19640,CC_gene:NRT1.5,CC_gene:NRT1.8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011437001~ Putative peptide/nitrate transporter At5g19640~ At5g19640~ complete;original_location=join(35942..35983%2C36647..36803%2C36938..37155%2C37273..37832%2C37963..38833);owner=coffea | |
| 6366 chr1 manual_curation exon 20077297 20077699 . - . Parent=GSCOCT00011437001 | |
| 6367 chr1 manual_curation exon 20076477 20076633 . - . Parent=GSCOCT00011437001 | |
| 6368 chr1 manual_curation exon 20076125 20076342 . - . Parent=GSCOCT00011437001 | |
| 6369 chr1 manual_curation exon 20075448 20076007 . - . Parent=GSCOCT00011437001 | |
| 6370 chr1 manual_curation exon 20074108 20075317 . - . Parent=GSCOCT00011437001 | |
| 6371 chr1 manual_curation CDS 20077297 20077338 . - 0 Parent=GSCOCT00011437001 | |
| 6372 chr1 manual_curation CDS 20076477 20076633 . - 0 Parent=GSCOCT00011437001 | |
| 6373 chr1 manual_curation CDS 20076125 20076342 . - 1 Parent=GSCOCT00011437001 | |
| 6374 chr1 manual_curation CDS 20075448 20076007 . - 0 Parent=GSCOCT00011437001 | |
| 6375 chr1 manual_curation CDS 20074447 20075317 . - 2 Parent=GSCOCT00011437001 | |
| 6376 chr1 manual_curation gene 20089992 20095835 . + . ID=GSCOCG00011435001;Name=Cc01_g05340 | |
| 6377 chr1 manual_curation mRNA 20089992 20095835 . + . ID=GSCOCT00011435001;Parent=GSCOCG00011435001;Name=Cc01_g05340 | |
| 6378 chr1 manual_curation polypeptide 20091474 20095513 . + . ID=GSCOCP00011435001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR002198,InterPro:IPR002347,InterPro:IPR014358,InterPro:IPR016040,PANTHER:PTHR19410,PANTHER:PTHR19410:SF12,PRINTS:PR00081,SwissProt:P73016,SwissProt:P80030,SwissProt:Q05069,TAIR:AT2G05990.1,TrEMBL:B5LAU4,TrEMBL:B8K204,TrEMBL:B9GYV3;Derives_from=GSCOCT00011435001;Name=Cc01_g05340;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004318,GO:0005488,GO:0006633,GO:0008152,GO:0016491,GO:0055114,CC_EC_number:1.3.1.9,CC_EC_number:1.3.1.9,PRODUCT:Enoyl-[acyl-carrier-protein] reductase [NADH]%2C chloroplastic,CC_functional_completeness:complete,CC_gene:fabI;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011435001~ Enoyl-[acyl-carrier-protein] reductase [NADH]%2C chloroplastic~ fabI~ complete;original_location=complement(join(21530..21806%2C20492..20601%2C20352..20407%2C20167..20251%2C20036..20083%2C19356..19430%2C19154..19281%2C19003..19074%2C18879..18930%2C18744..18801%2C18015..18113%2C17767..17921));owner=coffea | |
| 6379 chr1 manual_curation exon 20089992 20090065 . + . Parent=GSCOCT00011435001 | |
| 6380 chr1 manual_curation exon 20095359 20095835 . + . Parent=GSCOCT00011435001 | |
| 6381 chr1 manual_curation exon 20095167 20095265 . + . Parent=GSCOCT00011435001 | |
| 6382 chr1 manual_curation exon 20094479 20094536 . + . Parent=GSCOCT00011435001 | |
| 6383 chr1 manual_curation exon 20094350 20094401 . + . Parent=GSCOCT00011435001 | |
| 6384 chr1 manual_curation exon 20094206 20094277 . + . Parent=GSCOCT00011435001 | |
| 6385 chr1 manual_curation exon 20093999 20094126 . + . Parent=GSCOCT00011435001 | |
| 6386 chr1 manual_curation exon 20093850 20093924 . + . Parent=GSCOCT00011435001 | |
| 6387 chr1 manual_curation exon 20093197 20093244 . + . Parent=GSCOCT00011435001 | |
| 6388 chr1 manual_curation exon 20093029 20093113 . + . Parent=GSCOCT00011435001 | |
| 6389 chr1 manual_curation exon 20092873 20092928 . + . Parent=GSCOCT00011435001 | |
| 6390 chr1 manual_curation exon 20092679 20092788 . + . Parent=GSCOCT00011435001 | |
| 6391 chr1 manual_curation exon 20091437 20091750 . + . Parent=GSCOCT00011435001 | |
| 6392 chr1 manual_curation CDS 20095359 20095513 . + 1 Parent=GSCOCT00011435001 | |
| 6393 chr1 manual_curation CDS 20095167 20095265 . + 1 Parent=GSCOCT00011435001 | |
| 6394 chr1 manual_curation CDS 20094479 20094536 . + 0 Parent=GSCOCT00011435001 | |
| 6395 chr1 manual_curation CDS 20094350 20094401 . + 2 Parent=GSCOCT00011435001 | |
| 6396 chr1 manual_curation CDS 20094206 20094277 . + 2 Parent=GSCOCT00011435001 | |
| 6397 chr1 manual_curation CDS 20093999 20094126 . + 0 Parent=GSCOCT00011435001 | |
| 6398 chr1 manual_curation CDS 20093850 20093924 . + 0 Parent=GSCOCT00011435001 | |
| 6399 chr1 manual_curation CDS 20093197 20093244 . + 0 Parent=GSCOCT00011435001 | |
| 6400 chr1 manual_curation CDS 20093029 20093113 . + 2 Parent=GSCOCT00011435001 | |
| 6401 chr1 manual_curation CDS 20092873 20092928 . + 0 Parent=GSCOCT00011435001 | |
| 6402 chr1 manual_curation CDS 20092679 20092788 . + 1 Parent=GSCOCT00011435001 | |
| 6403 chr1 manual_curation CDS 20091474 20091750 . + 0 Parent=GSCOCT00011435001 | |
| 6404 chr1 manual_curation gene 20096809 20099548 . - . ID=GSCOCG00011434001;Name=Cc01_g05350 | |
| 6405 chr1 manual_curation mRNA 20096809 20099548 . - . ID=GSCOCT00011434001;Parent=GSCOCG00011434001;Name=Cc01_g05350 | |
| 6406 chr1 manual_curation polypeptide 20096809 20099548 . - . ID=GSCOCP00011434001;Dbxref=InterPro:IPR014854,PANTHER:PTHR16140,PFAM:PF08743,TAIR:AT1G51130.1,TAIR:AT3G20760.1,TrEMBL:B9IHZ9,TrEMBL:F6HLJ8,TrEMBL:I1HYA6;Derives_from=GSCOCT00011434001;Name=Cc01_g05350;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011434001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=join(13732..13777%2C15071..15329%2C15416..15506%2C15692..15899%2C16001..16092%2C16199..16471);owner=coffea | |
| 6407 chr1 manual_curation exon 20099503 20099548 . - . Parent=GSCOCT00011434001 | |
| 6408 chr1 manual_curation exon 20097951 20098209 . - . Parent=GSCOCT00011434001 | |
| 6409 chr1 manual_curation exon 20097774 20097864 . - . Parent=GSCOCT00011434001 | |
| 6410 chr1 manual_curation exon 20097381 20097588 . - . Parent=GSCOCT00011434001 | |
| 6411 chr1 manual_curation exon 20097188 20097279 . - . Parent=GSCOCT00011434001 | |
| 6412 chr1 manual_curation exon 20096809 20097081 . - . Parent=GSCOCT00011434001 | |
| 6413 chr1 manual_curation CDS 20099503 20099548 . - 0 Parent=GSCOCT00011434001 | |
| 6414 chr1 manual_curation CDS 20097951 20098209 . - 1 Parent=GSCOCT00011434001 | |
| 6415 chr1 manual_curation CDS 20097774 20097864 . - 2 Parent=GSCOCT00011434001 | |
| 6416 chr1 manual_curation CDS 20097381 20097588 . - 0 Parent=GSCOCT00011434001 | |
| 6417 chr1 manual_curation CDS 20097188 20097279 . - 1 Parent=GSCOCT00011434001 | |
| 6418 chr1 manual_curation CDS 20096809 20097081 . - 0 Parent=GSCOCT00011434001 | |
| 6419 chr1 manual_curation gene 20146240 20172755 . + . ID=GSCOCG00027320001;Name=Cc01_g05360 | |
| 6420 chr1 manual_curation mRNA 20146240 20172755 . + . ID=GSCOCT00027320001;Parent=GSCOCG00027320001;Name=Cc01_g05360 | |
| 6421 chr1 manual_curation polypeptide 20146492 20172422 . + . ID=GSCOCP00027320001;Dbxref=GENE3D:G3DSA:1.10.555.10,GENE3D:G3DSA:2.30.29.30,InterPro:IPR000198,InterPro:IPR001849,InterPro:IPR008936,InterPro:IPR011993,PFAM:PF00169,PFAM:PF00620,PROFILE:PS50003,PROFILE:PS50238,SMART:SM00233,SMART:SM00324,SUPERFAMILY:SSF48350,SwissProt:Q5U2Z7,SwissProt:Q8C4V1,SwissProt:Q8N264,TAIR:AT4G24580.1,TAIR:AT5G12150.1,TAIR:AT5G19390.1,TrEMBL:B9GG78,TrEMBL:B9HNH0,TrEMBL:G7K336;Derives_from=GSCOCT00027320001;Name=Cc01_g05360;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0007165,CC_EC_number:missing_EC_number,PRODUCT:Rho GTPase activation protein (RhoGAP) with PH domain,CC_functional_completeness:complete,CC_gene:Arhgap24,CC_gene:ARHGAP24;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027320001~ Rho GTPase activation protein (RhoGAP) with PH domain~ Arhgap24~ complete;original_location=join(33113..33166%2C35121..35157%2C35863..35939%2C38417..38487%2C38651..38729%2C38844..38988%2C39164..39283%2C40709..40786%2C44291..44346%2C44436..44505%2C45076..45163%2C48841..49084%2C51366..51587%2C52174..52515%2C52888..52937%2C54255..54315%2C54402..54485%2C55479..55592%2C55679..55848%2C56365..56434%2C57648..57851%2C58861..59043);owner=coffea | |
| 6422 chr1 manual_curation exon 20146240 20146545 . + . Parent=GSCOCT00027320001 | |
| 6423 chr1 manual_curation exon 20148500 20148536 . + . Parent=GSCOCT00027320001 | |
| 6424 chr1 manual_curation exon 20149242 20149318 . + . Parent=GSCOCT00027320001 | |
| 6425 chr1 manual_curation exon 20151796 20151866 . + . Parent=GSCOCT00027320001 | |
| 6426 chr1 manual_curation exon 20152030 20152108 . + . Parent=GSCOCT00027320001 | |
| 6427 chr1 manual_curation exon 20152223 20152367 . + . Parent=GSCOCT00027320001 | |
| 6428 chr1 manual_curation exon 20152543 20152662 . + . Parent=GSCOCT00027320001 | |
| 6429 chr1 manual_curation exon 20154088 20154165 . + . Parent=GSCOCT00027320001 | |
| 6430 chr1 manual_curation exon 20157670 20157725 . + . Parent=GSCOCT00027320001 | |
| 6431 chr1 manual_curation exon 20157815 20157884 . + . Parent=GSCOCT00027320001 | |
| 6432 chr1 manual_curation exon 20158455 20158542 . + . Parent=GSCOCT00027320001 | |
| 6433 chr1 manual_curation exon 20162220 20162463 . + . Parent=GSCOCT00027320001 | |
| 6434 chr1 manual_curation exon 20164745 20164966 . + . Parent=GSCOCT00027320001 | |
| 6435 chr1 manual_curation exon 20165553 20165894 . + . Parent=GSCOCT00027320001 | |
| 6436 chr1 manual_curation exon 20166267 20166316 . + . Parent=GSCOCT00027320001 | |
| 6437 chr1 manual_curation exon 20167634 20167694 . + . Parent=GSCOCT00027320001 | |
| 6438 chr1 manual_curation exon 20167781 20167864 . + . Parent=GSCOCT00027320001 | |
| 6439 chr1 manual_curation exon 20168858 20168971 . + . Parent=GSCOCT00027320001 | |
| 6440 chr1 manual_curation exon 20169058 20169227 . + . Parent=GSCOCT00027320001 | |
| 6441 chr1 manual_curation exon 20169744 20169813 . + . Parent=GSCOCT00027320001 | |
| 6442 chr1 manual_curation exon 20171027 20171230 . + . Parent=GSCOCT00027320001 | |
| 6443 chr1 manual_curation exon 20172240 20172755 . + . Parent=GSCOCT00027320001 | |
| 6444 chr1 manual_curation CDS 20146492 20146545 . + 0 Parent=GSCOCT00027320001 | |
| 6445 chr1 manual_curation CDS 20148500 20148536 . + 0 Parent=GSCOCT00027320001 | |
| 6446 chr1 manual_curation CDS 20149242 20149318 . + 1 Parent=GSCOCT00027320001 | |
| 6447 chr1 manual_curation CDS 20151796 20151866 . + 0 Parent=GSCOCT00027320001 | |
| 6448 chr1 manual_curation CDS 20152030 20152108 . + 2 Parent=GSCOCT00027320001 | |
| 6449 chr1 manual_curation CDS 20152223 20152367 . + 0 Parent=GSCOCT00027320001 | |
| 6450 chr1 manual_curation CDS 20152543 20152662 . + 1 Parent=GSCOCT00027320001 | |
| 6451 chr1 manual_curation CDS 20154088 20154165 . + 1 Parent=GSCOCT00027320001 | |
| 6452 chr1 manual_curation CDS 20157670 20157725 . + 1 Parent=GSCOCT00027320001 | |
| 6453 chr1 manual_curation CDS 20157815 20157884 . + 0 Parent=GSCOCT00027320001 | |
| 6454 chr1 manual_curation CDS 20158455 20158542 . + 1 Parent=GSCOCT00027320001 | |
| 6455 chr1 manual_curation CDS 20162220 20162463 . + 2 Parent=GSCOCT00027320001 | |
| 6456 chr1 manual_curation CDS 20164745 20164966 . + 0 Parent=GSCOCT00027320001 | |
| 6457 chr1 manual_curation CDS 20165553 20165894 . + 0 Parent=GSCOCT00027320001 | |
| 6458 chr1 manual_curation CDS 20166267 20166316 . + 0 Parent=GSCOCT00027320001 | |
| 6459 chr1 manual_curation CDS 20167634 20167694 . + 2 Parent=GSCOCT00027320001 | |
| 6460 chr1 manual_curation CDS 20167781 20167864 . + 0 Parent=GSCOCT00027320001 | |
| 6461 chr1 manual_curation CDS 20168858 20168971 . + 0 Parent=GSCOCT00027320001 | |
| 6462 chr1 manual_curation CDS 20169058 20169227 . + 0 Parent=GSCOCT00027320001 | |
| 6463 chr1 manual_curation CDS 20169744 20169813 . + 2 Parent=GSCOCT00027320001 | |
| 6464 chr1 manual_curation CDS 20171027 20171230 . + 0 Parent=GSCOCT00027320001 | |
| 6465 chr1 manual_curation CDS 20172240 20172422 . + 0 Parent=GSCOCT00027320001 | |
| 6466 chr1 manual_curation gene 20182988 20186725 . + . ID=GSCOCG00027322001;Name=Cc01_g05370 | |
| 6467 chr1 manual_curation mRNA 20182988 20186725 . + . ID=GSCOCT00027322001;Parent=GSCOCG00027322001;Name=Cc01_g05370 | |
| 6468 chr1 manual_curation polypeptide 20184492 20185397 . + . ID=GSCOCP00027322001;Dbxref=InterPro:IPR016090,SUPERFAMILY:SSF48619,TAIR:AT4G29070.1,TrEMBL:B9GG79,TrEMBL:B9SJ74,TrEMBL:D7T170;Derives_from=GSCOCT00027322001;Name=Cc01_g05370;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Phospholipase A2 family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027322001~ Phospholipase A2 family protein~ unknown_gene~ complete;original_location=join(71113..71713%2C71816..72018);owner=coffea | |
| 6469 chr1 manual_curation exon 20182988 20183167 . + . Parent=GSCOCT00027322001 | |
| 6470 chr1 manual_curation exon 20186595 20186725 . + . Parent=GSCOCT00027322001 | |
| 6471 chr1 manual_curation exon 20184437 20185092 . + . Parent=GSCOCT00027322001 | |
| 6472 chr1 manual_curation exon 20185195 20185399 . + . Parent=GSCOCT00027322001 | |
| 6473 chr1 manual_curation CDS 20184492 20185092 . + 0 Parent=GSCOCT00027322001 | |
| 6474 chr1 manual_curation CDS 20185195 20185397 . + 1 Parent=GSCOCT00027322001 | |
| 6475 chr1 manual_curation gene 20188243 20190066 . - . ID=GSCOCG00027324001;Name=Cc01_g05380 | |
| 6476 chr1 manual_curation mRNA 20188243 20190066 . - . ID=GSCOCT00027324001;Parent=GSCOCG00027324001;Name=Cc01_g05380 | |
| 6477 chr1 manual_curation polypeptide 20188243 20190066 . - . ID=GSCOCP00027324001;Dbxref=InterPro:IPR002695,InterPro:IPR011607,InterPro:IPR013982,PANTHER:PTHR11692,PFAM:PF01808,PFAM:PF02142,PIR:PIRSF000414,SMART:SM00798,SMART:SM00851,SUPERFAMILY:SSF64197,SwissProt:A9VRF5,SwissProt:C1EV67,SwissProt:Q73EN1,TAIR:AT2G35040.1,TIGRFAMs:TIGR00355,TrEMBL:B9SXJ1,TrEMBL:D0EWF3,TrEMBL:Q9FPL3;Derives_from=GSCOCT00027324001;Name=Cc01_g05380;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0003937,GO:0004643,GO:0006164,GO:0006188,CC_EC_number:3.5.4.10,CC_EC_number:3.5.4.10,PRODUCT:Putative Bifunctional purine biosynthesis protein PurH,CC_functional_completeness:complete,CC_gene:purH;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027324001~ Putative Bifunctional purine biosynthesis protein PurH~ purH~ complete;original_location=complement(74864..76687);owner=coffea | |
| 6478 chr1 manual_curation exon 20188243 20190066 . - . Parent=GSCOCT00027324001 | |
| 6479 chr1 manual_curation CDS 20188243 20190066 . - 0 Parent=GSCOCT00027324001 | |
| 6480 chr1 manual_curation gene 20223823 20232565 . + . ID=GSCOCG00027326001;Name=Cc01_g05390 | |
| 6481 chr1 manual_curation mRNA 20223823 20232565 . + . ID=GSCOCT00027326001;Parent=GSCOCG00027326001;Name=Cc01_g05390 | |
| 6482 chr1 manual_curation polypeptide 20224083 20232359 . + . ID=GSCOCP00027326001;Dbxref=InterPro:IPR007312,PFAM:PF04185,SwissProt:P95245,SwissProt:P95246,SwissProt:Q9RGS8,TAIR:AT1G07230.1,TAIR:AT2G26870.1,TAIR:AT3G48610.1,TrEMBL:B9GG81,TrEMBL:B9HNG8,TrEMBL:I1NDW4;Derives_from=GSCOCT00027326001;Name=Cc01_g05390;Ontology_term=CC_evidence_code:ISS,CC_EC_number:3.1.4.3,PRODUCT:Putative Phospholipase C 2,CC_functional_completeness:modules,CC_gene:plcC,CC_gene:plcB,CC_gene:plcN;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027326001~ Putative Phospholipase C 2~ plcC~ modules;original_location=join(110704..111117%2C114508..115162%2C116878..117054%2C118667..118980);owner=coffea | |
| 6483 chr1 manual_curation exon 20223823 20224496 . + . Parent=GSCOCT00027326001 | |
| 6484 chr1 manual_curation exon 20227887 20228541 . + . Parent=GSCOCT00027326001 | |
| 6485 chr1 manual_curation exon 20230257 20230433 . + . Parent=GSCOCT00027326001 | |
| 6486 chr1 manual_curation exon 20232046 20232565 . + . Parent=GSCOCT00027326001 | |
| 6487 chr1 manual_curation CDS 20224083 20224496 . + 0 Parent=GSCOCT00027326001 | |
| 6488 chr1 manual_curation CDS 20227887 20228541 . + 0 Parent=GSCOCT00027326001 | |
| 6489 chr1 manual_curation CDS 20230257 20230433 . + 1 Parent=GSCOCT00027326001 | |
| 6490 chr1 manual_curation CDS 20232046 20232359 . + 1 Parent=GSCOCT00027326001 | |
| 6491 chr1 manual_curation gene 20233295 20239548 . - . ID=GSCOCG00027328001;Name=Cc01_g05400 | |
| 6492 chr1 manual_curation mRNA 20233295 20239548 . - . ID=GSCOCT00027328001;Parent=GSCOCG00027328001;Name=Cc01_g05400 | |
| 6493 chr1 manual_curation polypeptide 20233802 20238655 . - . ID=GSCOCP00027328001;Dbxref=TAIR:AT2G25260.1,TAIR:AT5G13500.1,TAIR:AT5G25265.1,TrEMBL:B9GG82,TrEMBL:F6HA43,TrEMBL:F6HVD6;Derives_from=GSCOCT00027328001;Name=Cc01_g05400;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027328001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25265.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(124872..125276%2C124067..124134%2C123781..123982%2C122041..122138%2C121861..121930%2C121713..121784%2C121296..121409%2C120423..120485));owner=coffea | |
| 6494 chr1 manual_curation exon 20233295 20233864 . - . Parent=GSCOCT00027328001 | |
| 6495 chr1 manual_curation exon 20234675 20234788 . - . Parent=GSCOCT00027328001 | |
| 6496 chr1 manual_curation exon 20235092 20235163 . - . Parent=GSCOCT00027328001 | |
| 6497 chr1 manual_curation exon 20235240 20235309 . - . Parent=GSCOCT00027328001 | |
| 6498 chr1 manual_curation exon 20235420 20235517 . - . Parent=GSCOCT00027328001 | |
| 6499 chr1 manual_curation exon 20237160 20237361 . - . Parent=GSCOCT00027328001 | |
| 6500 chr1 manual_curation exon 20237446 20237513 . - . Parent=GSCOCT00027328001 | |
| 6501 chr1 manual_curation exon 20238251 20239548 . - . Parent=GSCOCT00027328001 | |
| 6502 chr1 manual_curation CDS 20233802 20233864 . - 0 Parent=GSCOCT00027328001 | |
| 6503 chr1 manual_curation CDS 20234675 20234788 . - 0 Parent=GSCOCT00027328001 | |
| 6504 chr1 manual_curation CDS 20235092 20235163 . - 0 Parent=GSCOCT00027328001 | |
| 6505 chr1 manual_curation CDS 20235240 20235309 . - 2 Parent=GSCOCT00027328001 | |
| 6506 chr1 manual_curation CDS 20235420 20235517 . - 0 Parent=GSCOCT00027328001 | |
| 6507 chr1 manual_curation CDS 20237160 20237361 . - 2 Parent=GSCOCT00027328001 | |
| 6508 chr1 manual_curation CDS 20237446 20237513 . - 0 Parent=GSCOCT00027328001 | |
| 6509 chr1 manual_curation CDS 20238251 20238655 . - 0 Parent=GSCOCT00027328001 | |
| 6510 chr1 manual_curation gene 20336351 20336762 . + . ID=GSCOCG00027329001;Name=Cc01_g05410 | |
| 6511 chr1 manual_curation mRNA 20336351 20336762 . + . ID=GSCOCT00027329001;Parent=GSCOCG00027329001;Name=Cc01_g05410 | |
| 6512 chr1 manual_curation polypeptide 20336351 20336762 . + . ID=GSCOCP00027329001;Dbxref=GENE3D:G3DSA:1.10.20.10,InterPro:IPR000164,InterPro:IPR007125,InterPro:IPR009072,PANTHER:PTHR11426,PFAM:PF00125,PRINTS:PR00622,SMART:SM00428,SUPERFAMILY:SSF47113,TrEMBL:Q4S4R3;Derives_from=GSCOCT00027329001;Name=Cc01_g05410;Ontology_term=CC_evidence_code:ISS,GO:0000786,GO:0003677,GO:0006334,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:H3-1.1,CC_gene:B34,CC_gene:H3-7,CC_gene:Os01g0866200,CC_gene:OsI_019426;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027329001~ Hypothetical protein~ H3-1.1~ missing_functional_completeness;original_location=join(222972..223010%2C223258..223383);owner=coffea | |
| 6513 chr1 manual_curation exon 20336351 20336389 . + . Parent=GSCOCT00027329001 | |
| 6514 chr1 manual_curation exon 20336637 20336762 . + . Parent=GSCOCT00027329001 | |
| 6515 chr1 manual_curation CDS 20336351 20336389 . + 0 Parent=GSCOCT00027329001 | |
| 6516 chr1 manual_curation CDS 20336637 20336762 . + 0 Parent=GSCOCT00027329001 | |
| 6517 chr1 manual_curation gene 20376049 20378708 . + . ID=GSCOCG00027330001;Name=Cc01_g05420 | |
| 6518 chr1 manual_curation mRNA 20376049 20378708 . + . ID=GSCOCT00027330001;Parent=GSCOCG00027330001;Name=Cc01_g05420 | |
| 6519 chr1 manual_curation polypeptide 20376049 20378488 . + . ID=GSCOCP00027330001;Dbxref=InterPro:IPR000073,PFAM:PF00561,SwissProt:A2WYS8,SwissProt:Q0JG98,SwissProt:Q9SE93,TAIR:AT2G23560.1,TAIR:AT2G23590.1,TAIR:AT2G23620.1,TrEMBL:B9HEE6,TrEMBL:B9S8N0,TrEMBL:B9S8N3;Derives_from=GSCOCT00027330001;Name=Cc01_g05420;Ontology_term=CC_evidence_code:ISS,CC_EC_number:3.1.1.78,PRODUCT:Putative Polyneuridine-aldehyde esterase,CC_functional_completeness:complete,CC_gene:PNAE,CC_gene:PIR7A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027330001~ Putative Polyneuridine-aldehyde esterase~ PNAE~ complete;original_location=join(262670..263089%2C263605..263721%2C264801..265109);owner=coffea | |
| 6520 chr1 manual_curation exon 20376049 20376468 . + . Parent=GSCOCT00027330001 | |
| 6521 chr1 manual_curation exon 20376984 20377100 . + . Parent=GSCOCT00027330001 | |
| 6522 chr1 manual_curation exon 20378180 20378708 . + . Parent=GSCOCT00027330001 | |
| 6523 chr1 manual_curation CDS 20376049 20376468 . + 0 Parent=GSCOCT00027330001 | |
| 6524 chr1 manual_curation CDS 20376984 20377100 . + 0 Parent=GSCOCT00027330001 | |
| 6525 chr1 manual_curation CDS 20378180 20378488 . + 0 Parent=GSCOCT00027330001 | |
| 6526 chr1 manual_curation gene 20481814 20481960 . - . ID=GSCOCG00027333001;Name=Cc01_g05430 | |
| 6527 chr1 manual_curation mRNA 20481814 20481960 . - . ID=GSCOCT00027333001;Parent=GSCOCG00027333001;Name=Cc01_g05430 | |
| 6528 chr1 manual_curation polypeptide 20481814 20481960 . - . ID=GSCOCP00027333001;Dbxref=InterPro:IPR000626,InterPro:IPR019955,InterPro:IPR019956,PFAM:PF00240,PRINTS:PR00348,PROFILE:PS50053,SMART:SM00213,SwissProt:P0CG84,TrEMBL:Q6KFS1,TrEMBL:Q6KFS2;Derives_from=GSCOCT00027333001;Name=Cc01_g05430;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Polyubiquitin (Fragment),CC_functional_completeness:fragment,CC_gene:UBI4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027333001~ Polyubiquitin (Fragment)~ UBI4~ fragment;original_location=complement(368435..368581);owner=coffea | |
| 6529 chr1 manual_curation exon 20481814 20481960 . - . Parent=GSCOCT00027333001 | |
| 6530 chr1 manual_curation CDS 20481814 20481960 . - 0 Parent=GSCOCT00027333001 | |
| 6531 chr1 manual_curation gene 20499763 20502379 . + . ID=GSCOCG00027334001;Name=Cc01_g05440 | |
| 6532 chr1 manual_curation mRNA 20499763 20502379 . + . ID=GSCOCT00027334001;Parent=GSCOCG00027334001;Name=Cc01_g05440 | |
| 6533 chr1 manual_curation polypeptide 20499763 20502146 . + . ID=GSCOCP00027334001;Dbxref=InterPro:IPR000073,PFAM:PF00561,SwissProt:A2WYS7,SwissProt:Q0JG99,SwissProt:Q9SE93,TAIR:AT2G23560.1,TAIR:AT2G23610.1,TAIR:AT2G23620.1,TrEMBL:B9HEE6,TrEMBL:B9S8N3,TrEMBL:D7SSD8;Derives_from=GSCOCT00027334001;Name=Cc01_g05440;Ontology_term=CC_evidence_code:ISS,CC_EC_number:3.1.1.78,PRODUCT:Putative Polyneuridine-aldehyde esterase,CC_functional_completeness:complete,CC_gene:PNAE,CC_gene:PIR7B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027334001~ Putative Polyneuridine-aldehyde esterase~ PNAE~ complete;original_location=join(386384..386803%2C387283..387399%2C388444..388767);owner=coffea | |
| 6534 chr1 manual_curation exon 20499763 20500182 . + . Parent=GSCOCT00027334001 | |
| 6535 chr1 manual_curation exon 20500662 20500778 . + . Parent=GSCOCT00027334001 | |
| 6536 chr1 manual_curation exon 20501823 20502379 . + . Parent=GSCOCT00027334001 | |
| 6537 chr1 manual_curation CDS 20499763 20500182 . + 0 Parent=GSCOCT00027334001 | |
| 6538 chr1 manual_curation CDS 20500662 20500778 . + 0 Parent=GSCOCT00027334001 | |
| 6539 chr1 manual_curation CDS 20501823 20502146 . + 0 Parent=GSCOCT00027334001 | |
| 6540 chr1 manual_curation gene 20652275 20652916 . - . ID=GSCOCG00027339001;Name=Cc01_g05450 | |
| 6541 chr1 manual_curation mRNA 20652275 20652916 . - . ID=GSCOCT00027339001;Parent=GSCOCG00027339001;Name=Cc01_g05450 | |
| 6542 chr1 manual_curation polypeptide 20652275 20652916 . - . ID=GSCOCP00027339001;Dbxref=TAIR:AT1G28190.1,TAIR:AT5G12340.1,TrEMBL:B9GG89,TrEMBL:B9TF62,TrEMBL:D7T157;Derives_from=GSCOCT00027339001;Name=Cc01_g05450;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027339001~ Putative unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28190.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(538896..539537);owner=coffea | |
| 6543 chr1 manual_curation exon 20652275 20652916 . - . Parent=GSCOCT00027339001 | |
| 6544 chr1 manual_curation CDS 20652275 20652916 . - 0 Parent=GSCOCT00027339001 | |
| 6545 chr1 manual_curation gene 20727076 20727675 . - . ID=GSCOCG00027343001;Name=Cc01_g05460 | |
| 6546 chr1 manual_curation mRNA 20727076 20727675 . - . ID=GSCOCT00027343001;Parent=GSCOCG00027343001;Name=Cc01_g05460 | |
| 6547 chr1 manual_curation polypeptide 20727076 20727675 . - . ID=GSCOCP00027343001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:O04647,SwissProt:Q9FLD8,TAIR:AT5G16420.1,TAIR:AT5G27270.1,TAIR:AT5G39980.1,TIGRFAMs:TIGR00756,TrEMBL:B9S207,TrEMBL:F6HEG0,TrEMBL:I1KS45;Derives_from=GSCOCT00027343001;Name=Cc01_g05460;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At5g27270,CC_functional_completeness:fragment,CC_gene:EMB976,CC_gene:At5g39980;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027343001~ Pentatricopeptide repeat-containing protein At5g27270~ EMB976~ fragment;original_location=complement(613697..614296);owner=coffea | |
| 6548 chr1 manual_curation exon 20727076 20727675 . - . Parent=GSCOCT00027343001 | |
| 6549 chr1 manual_curation CDS 20727076 20727675 . - 0 Parent=GSCOCT00027343001 | |
| 6550 chr1 manual_curation gene 20742861 20745005 . - . ID=GSCOCG00027346001;Name=Cc01_g05470 | |
| 6551 chr1 manual_curation mRNA 20742861 20745005 . - . ID=GSCOCT00027346001;Parent=GSCOCG00027346001;Name=Cc01_g05470 | |
| 6552 chr1 manual_curation polypeptide 20742861 20745005 . - . ID=GSCOCP00027346001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q0WVK7,SwissProt:Q9FIX3,SwissProt:Q9LFC5,TAIR:AT1G05670.1,TAIR:AT5G01110.1,TAIR:AT5G39710.1,TIGRFAMs:TIGR00756,TrEMBL:A5BXY8,TrEMBL:B9GG90,TrEMBL:F6HA22;Derives_from=GSCOCT00027346001;Name=Cc01_g05470;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At5g01110,CC_functional_completeness:complete,CC_gene:At5g01110,CC_gene:At1g05670,CC_gene:EMB2745;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027346001~ Pentatricopeptide repeat-containing protein At5g01110~ At5g01110~ complete;original_location=complement(629482..631626);owner=coffea | |
| 6553 chr1 manual_curation exon 20742861 20745005 . - . Parent=GSCOCT00027346001 | |
| 6554 chr1 manual_curation CDS 20742861 20745005 . - 0 Parent=GSCOCT00027346001 | |
| 6555 chr1 manual_curation gene 20761408 20763882 . - . ID=GSCOCG00027347001;Name=Cc01_g05480 | |
| 6556 chr1 manual_curation mRNA 20761408 20763882 . - . ID=GSCOCT00027347001;Parent=GSCOCG00027347001;Name=Cc01_g05480 | |
| 6557 chr1 manual_curation polypeptide 20761408 20763882 . - . ID=GSCOCP00027347001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SMART:SM00369,SwissProt:C0LGQ5,SwissProt:Q9FL28,SwissProt:Q9LP24,TAIR:AT1G35710.1,TAIR:AT4G20140.1,TAIR:AT5G46330.1,TrEMBL:G5CBT7,TrEMBL:G5CBU1,TrEMBL:G5CBU2;Derives_from=GSCOCT00027347001;Name=Cc01_g05480;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:3.1.3.16,PRODUCT:Putative Probable leucine-rich repeat receptor-like protein kinase At1g35710,CC_functional_completeness:complete,CC_gene:At1g35710,CC_gene:GSO1,CC_gene:FLS2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027347001~ Putative Probable leucine-rich repeat receptor-like protein kinase At1g35710~ At1g35710~ complete;original_location=complement(join(650290..650503%2C649906..650214%2C648841..649740%2C648533..648633%2C648029..648319));owner=coffea | |
| 6558 chr1 manual_curation exon 20761408 20761698 . - . Parent=GSCOCT00027347001 | |
| 6559 chr1 manual_curation exon 20761912 20762012 . - . Parent=GSCOCT00027347001 | |
| 6560 chr1 manual_curation exon 20762220 20763119 . - . Parent=GSCOCT00027347001 | |
| 6561 chr1 manual_curation exon 20763285 20763593 . - . Parent=GSCOCT00027347001 | |
| 6562 chr1 manual_curation exon 20763669 20763882 . - . Parent=GSCOCT00027347001 | |
| 6563 chr1 manual_curation CDS 20761408 20761698 . - 0 Parent=GSCOCT00027347001 | |
| 6564 chr1 manual_curation CDS 20761912 20762012 . - 1 Parent=GSCOCT00027347001 | |
| 6565 chr1 manual_curation CDS 20762220 20763119 . - 1 Parent=GSCOCT00027347001 | |
| 6566 chr1 manual_curation CDS 20763285 20763593 . - 1 Parent=GSCOCT00027347001 | |
| 6567 chr1 manual_curation CDS 20763669 20763882 . - 0 Parent=GSCOCT00027347001 | |
| 6568 chr1 manual_curation gene 20782070 20782299 . - . ID=GSCOCG00027349001;Name=Cc01_g05490 | |
| 6569 chr1 manual_curation mRNA 20782070 20782299 . - . ID=GSCOCT00027349001;Parent=GSCOCG00027349001;Name=Cc01_g05490 | |
| 6570 chr1 manual_curation polypeptide 20782070 20782299 . - . ID=GSCOCP00027349001;Derives_from=GSCOCT00027349001;Name=Cc01_g05490;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027349001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(668878..668920%2C668691..668743));owner=coffea | |
| 6571 chr1 manual_curation exon 20782070 20782122 . - . Parent=GSCOCT00027349001 | |
| 6572 chr1 manual_curation exon 20782257 20782299 . - . Parent=GSCOCT00027349001 | |
| 6573 chr1 manual_curation CDS 20782070 20782122 . - 1 Parent=GSCOCT00027349001 | |
| 6574 chr1 manual_curation CDS 20782257 20782299 . - 0 Parent=GSCOCT00027349001 | |
| 6575 chr1 manual_curation gene 20787014 20787970 . - . ID=GSCOCG00027351001;Name=Cc01_g05500 | |
| 6576 chr1 manual_curation mRNA 20787014 20787970 . - . ID=GSCOCT00027351001;Parent=GSCOCG00027351001;Name=Cc01_g05500 | |
| 6577 chr1 manual_curation polypeptide 20787014 20787970 . - . ID=GSCOCP00027351001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR008266,InterPro:IPR020636,InterPro:IPR020657,PANTHER:PTHR22982,PANTHER:PTHR22982:SF40,PFAM:PF07714,PROFILE:PS50011,PROSITE:PS00109,TAIR:AT3G45240.1,TAIR:AT5G60550.1,TrEMBL:A5ATS4,TrEMBL:B9HQA2,TrEMBL:B9SWC3;Derives_from=GSCOCT00027351001;Name=Cc01_g05500;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004713,GO:0005524,GO:0006468,CC_EC_number:missing_EC_number,PRODUCT:Putative geminivirus rep interacting kinase 2,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027351001~ Putative geminivirus rep interacting kinase 2~ unknown_gene~ fragment;original_location=complement(join(674469..674591%2C673824..673947%2C673635..673720));owner=coffea | |
| 6578 chr1 manual_curation exon 20787014 20787099 . - . Parent=GSCOCT00027351001 | |
| 6579 chr1 manual_curation exon 20787203 20787326 . - . Parent=GSCOCT00027351001 | |
| 6580 chr1 manual_curation exon 20787848 20787970 . - . Parent=GSCOCT00027351001 | |
| 6581 chr1 manual_curation CDS 20787014 20787099 . - 1 Parent=GSCOCT00027351001 | |
| 6582 chr1 manual_curation CDS 20787203 20787326 . - 0 Parent=GSCOCT00027351001 | |
| 6583 chr1 manual_curation CDS 20787848 20787970 . - 0 Parent=GSCOCT00027351001 | |
| 6584 chr1 manual_curation gene 20847549 20848126 . + . ID=GSCOCG00027352001;Name=Cc01_g05510 | |
| 6585 chr1 manual_curation mRNA 20847549 20848126 . + . ID=GSCOCT00027352001;Parent=GSCOCG00027352001;Name=Cc01_g05510 | |
| 6586 chr1 manual_curation polypeptide 20847549 20848126 . + . ID=GSCOCP00027352001;Dbxref=TAIR:AT5G43680.1,TrEMBL:B9GS76,TrEMBL:D7T787,TrEMBL:I1L890;Derives_from=GSCOCT00027352001;Name=Cc01_g05510;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B Has 30201 Blast hits to 17322 proteins in 780 species,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027352001~ unknown protein%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ unknown_gene~ fragment;original_location=join(734170..734230%2C734527..734643%2C734725..734747);owner=coffea | |
| 6587 chr1 manual_curation exon 20847549 20847609 . + . Parent=GSCOCT00027352001 | |
| 6588 chr1 manual_curation exon 20847906 20848022 . + . Parent=GSCOCT00027352001 | |
| 6589 chr1 manual_curation exon 20848104 20848126 . + . Parent=GSCOCT00027352001 | |
| 6590 chr1 manual_curation CDS 20847549 20847609 . + 0 Parent=GSCOCT00027352001 | |
| 6591 chr1 manual_curation CDS 20847906 20848022 . + 1 Parent=GSCOCT00027352001 | |
| 6592 chr1 manual_curation CDS 20848104 20848126 . + 1 Parent=GSCOCT00027352001 | |
| 6593 chr1 manual_curation gene 20848292 20853427 . + . ID=GSCOCG00027353001;Name=Cc01_g05520 | |
| 6594 chr1 manual_curation mRNA 20848292 20853427 . + . ID=GSCOCT00027353001;Parent=GSCOCG00027353001;Name=Cc01_g05520 | |
| 6595 chr1 manual_curation polypeptide 20848292 20853427 . + . ID=GSCOCP00027353001;Dbxref=TAIR:AT5G43680.1,TrEMBL:B9GS76,TrEMBL:B9T097,TrEMBL:D7T787;Derives_from=GSCOCT00027353001;Name=Cc01_g05520;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027353001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=join(734913..734976%2C738670..738737%2C738819..739011%2C739939..740048);owner=coffea | |
| 6596 chr1 manual_curation exon 20848292 20848355 . + . Parent=GSCOCT00027353001 | |
| 6597 chr1 manual_curation exon 20852049 20852116 . + . Parent=GSCOCT00027353001 | |
| 6598 chr1 manual_curation exon 20852198 20852390 . + . Parent=GSCOCT00027353001 | |
| 6599 chr1 manual_curation exon 20853318 20853427 . + . Parent=GSCOCT00027353001 | |
| 6600 chr1 manual_curation CDS 20848292 20848355 . + 0 Parent=GSCOCT00027353001 | |
| 6601 chr1 manual_curation CDS 20852049 20852116 . + 1 Parent=GSCOCT00027353001 | |
| 6602 chr1 manual_curation CDS 20852198 20852390 . + 0 Parent=GSCOCT00027353001 | |
| 6603 chr1 manual_curation CDS 20853318 20853427 . + 1 Parent=GSCOCT00027353001 | |
| 6604 chr1 manual_curation gene 20924017 20932047 . + . ID=GSCOCG00027356001;Name=Cc01_g05530 | |
| 6605 chr1 manual_curation mRNA 20924017 20932047 . + . ID=GSCOCT00027356001;Parent=GSCOCG00027356001;Name=Cc01_g05530 | |
| 6606 chr1 manual_curation polypeptide 20924556 20931593 . + . ID=GSCOCP00027356001;Dbxref=InterPro:IPR006639,InterPro:IPR007369,PFAM:PF04258,SMART:SM00730,SwissProt:P49049,SwissProt:Q8TCT9,SwissProt:Q9D8V0,TAIR:AT1G01650.1,TAIR:AT2G03120.1,TAIR:AT4G33410.1,TrEMBL:A9PGG2,TrEMBL:B9GG92,TrEMBL:D7T153;Derives_from=GSCOCT00027356001;Name=Cc01_g05530;Ontology_term=CC_evidence_code:ISS,GO:0004190,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Putative Minor histocompatibility antigen H13,CC_functional_completeness:complete,CC_gene:HM13,CC_gene:Hm13,CC_gene:imp-2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027356001~ Putative Minor histocompatibility antigen H13~ HM13~ complete;original_location=join(811177..811216%2C812475..812590%2C812690..812841%2C812953..813038%2C814123..814250%2C815240..815290%2C815559..815645%2C815752..815821%2C816182..816318%2C816443..816520%2C818140..818214);owner=coffea | |
| 6607 chr1 manual_curation exon 20924017 20924318 . + . Parent=GSCOCT00027356001 | |
| 6608 chr1 manual_curation exon 20924494 20924595 . + . Parent=GSCOCT00027356001 | |
| 6609 chr1 manual_curation exon 20925854 20925969 . + . Parent=GSCOCT00027356001 | |
| 6610 chr1 manual_curation exon 20926069 20926220 . + . Parent=GSCOCT00027356001 | |
| 6611 chr1 manual_curation exon 20926332 20926417 . + . Parent=GSCOCT00027356001 | |
| 6612 chr1 manual_curation exon 20927502 20927629 . + . Parent=GSCOCT00027356001 | |
| 6613 chr1 manual_curation exon 20928619 20928669 . + . Parent=GSCOCT00027356001 | |
| 6614 chr1 manual_curation exon 20928938 20929024 . + . Parent=GSCOCT00027356001 | |
| 6615 chr1 manual_curation exon 20929131 20929200 . + . Parent=GSCOCT00027356001 | |
| 6616 chr1 manual_curation exon 20929561 20929697 . + . Parent=GSCOCT00027356001 | |
| 6617 chr1 manual_curation exon 20929822 20929899 . + . Parent=GSCOCT00027356001 | |
| 6618 chr1 manual_curation exon 20931519 20932047 . + . Parent=GSCOCT00027356001 | |
| 6619 chr1 manual_curation CDS 20924556 20924595 . + 0 Parent=GSCOCT00027356001 | |
| 6620 chr1 manual_curation CDS 20925854 20925969 . + 1 Parent=GSCOCT00027356001 | |
| 6621 chr1 manual_curation CDS 20926069 20926220 . + 0 Parent=GSCOCT00027356001 | |
| 6622 chr1 manual_curation CDS 20926332 20926417 . + 2 Parent=GSCOCT00027356001 | |
| 6623 chr1 manual_curation CDS 20927502 20927629 . + 1 Parent=GSCOCT00027356001 | |
| 6624 chr1 manual_curation CDS 20928619 20928669 . + 0 Parent=GSCOCT00027356001 | |
| 6625 chr1 manual_curation CDS 20928938 20929024 . + 0 Parent=GSCOCT00027356001 | |
| 6626 chr1 manual_curation CDS 20929131 20929200 . + 0 Parent=GSCOCT00027356001 | |
| 6627 chr1 manual_curation CDS 20929561 20929697 . + 1 Parent=GSCOCT00027356001 | |
| 6628 chr1 manual_curation CDS 20929822 20929899 . + 0 Parent=GSCOCT00027356001 | |
| 6629 chr1 manual_curation CDS 20931519 20931593 . + 0 Parent=GSCOCT00027356001 | |
| 6630 chr1 manual_curation gene 20948760 20962314 . + . ID=GSCOCG00027357001;Name=Cc01_g05540 | |
| 6631 chr1 manual_curation mRNA 20948760 20962314 . + . ID=GSCOCT00027357001;Parent=GSCOCG00027357001;Name=Cc01_g05540 | |
| 6632 chr1 manual_curation polypeptide 20949103 20961648 . + . ID=GSCOCP00027357001;Dbxref=GENE3D:G3DSA:2.130.10.30,GENE3D:G3DSA:2.30.29.30,InterPro:IPR000306,InterPro:IPR000408,InterPro:IPR009091,InterPro:IPR011011,InterPro:IPR011993,InterPro:IPR013591,InterPro:IPR017455,PFAM:PF00415,PFAM:PF01363,PFAM:PF08381,PRINTS:PR00633,PROFILE:PS50012,PROFILE:PS50178,PROSITE:PS00626,SMART:SM00064,SUPERFAMILY:SSF50985,SUPERFAMILY:SSF57903,SwissProt:O95714,SwissProt:Q15751,SwissProt:Q4U2R1,TAIR:AT5G12350.1,TAIR:AT5G19420.2,TAIR:AT5G42140.1,TrEMBL:B9HNF1,TrEMBL:B9SM24,TrEMBL:F6HA19;Derives_from=GSCOCT00027357001;Name=Cc01_g05540;Ontology_term=CC_evidence_code:ISS,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative E3 ubiquitin-protein ligase HERC2,CC_functional_completeness:complete,CC_gene:Herc2,CC_gene:HERC2,CC_gene:HERC1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027357001~ Putative E3 ubiquitin-protein ligase HERC2~ Herc2~ complete;original_location=join(835724..835795%2C836521..836607%2C837743..837832%2C840262..840342%2C840472..840666%2C840811..842931%2C844226..844372%2C846400..846785%2C848137..848269);owner=coffea | |
| 6633 chr1 manual_curation exon 20961928 20962314 . + . Parent=GSCOCT00027357001 | |
| 6634 chr1 manual_curation exon 20948760 20949174 . + . Parent=GSCOCT00027357001 | |
| 6635 chr1 manual_curation exon 20949900 20949986 . + . Parent=GSCOCT00027357001 | |
| 6636 chr1 manual_curation exon 20951122 20951211 . + . Parent=GSCOCT00027357001 | |
| 6637 chr1 manual_curation exon 20953641 20953721 . + . Parent=GSCOCT00027357001 | |
| 6638 chr1 manual_curation exon 20953851 20954045 . + . Parent=GSCOCT00027357001 | |
| 6639 chr1 manual_curation exon 20954190 20956310 . + . Parent=GSCOCT00027357001 | |
| 6640 chr1 manual_curation exon 20957605 20957751 . + . Parent=GSCOCT00027357001 | |
| 6641 chr1 manual_curation exon 20959779 20960164 . + . Parent=GSCOCT00027357001 | |
| 6642 chr1 manual_curation exon 20961516 20961666 . + . Parent=GSCOCT00027357001 | |
| 6643 chr1 manual_curation CDS 20949103 20949174 . + 0 Parent=GSCOCT00027357001 | |
| 6644 chr1 manual_curation CDS 20949900 20949986 . + 0 Parent=GSCOCT00027357001 | |
| 6645 chr1 manual_curation CDS 20951122 20951211 . + 0 Parent=GSCOCT00027357001 | |
| 6646 chr1 manual_curation CDS 20953641 20953721 . + 0 Parent=GSCOCT00027357001 | |
| 6647 chr1 manual_curation CDS 20953851 20954045 . + 0 Parent=GSCOCT00027357001 | |
| 6648 chr1 manual_curation CDS 20954190 20956310 . + 0 Parent=GSCOCT00027357001 | |
| 6649 chr1 manual_curation CDS 20957605 20957751 . + 0 Parent=GSCOCT00027357001 | |
| 6650 chr1 manual_curation CDS 20959779 20960164 . + 0 Parent=GSCOCT00027357001 | |
| 6651 chr1 manual_curation CDS 20961516 20961648 . + 2 Parent=GSCOCT00027357001 | |
| 6652 chr1 manual_curation gene 21045489 21050763 . + . ID=GSCOCG00027360001;Name=Cc01_g05550 | |
| 6653 chr1 manual_curation mRNA 21045489 21050763 . + . ID=GSCOCT00027360001;Parent=GSCOCG00027360001;Name=Cc01_g05550 | |
| 6654 chr1 manual_curation polypeptide 21045489 21047573 . + . ID=GSCOCP00027360001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:O04659,SwissProt:Q9LUS3,SwissProt:Q9SN39,TAIR:AT3G16610.1,TAIR:AT4G18750.1,TAIR:AT5G27110.1,TIGRFAMs:TIGR00756,TrEMBL:A5BMC7,TrEMBL:F6HA18,TrEMBL:I1KXX1;Derives_from=GSCOCT00027360001;Name=Cc01_g05550;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At5g27110,CC_functional_completeness:complete,CC_gene:PCMP-E14,CC_gene:PCMP-H45,CC_gene:PCMP-E91;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027360001~ Pentatricopeptide repeat-containing protein At5g27110~ PCMP-E14~ complete;original_location=932110..934194;owner=coffea | |
| 6655 chr1 manual_curation exon 21047822 21048365 . + . Parent=GSCOCT00027360001 | |
| 6656 chr1 manual_curation exon 21049215 21049589 . + . Parent=GSCOCT00027360001 | |
| 6657 chr1 manual_curation exon 21050465 21050763 . + . Parent=GSCOCT00027360001 | |
| 6658 chr1 manual_curation exon 21045489 21047677 . + . Parent=GSCOCT00027360001 | |
| 6659 chr1 manual_curation CDS 21045489 21047573 . + 0 Parent=GSCOCT00027360001 | |
| 6660 chr1 manual_curation gene 21056129 21058293 . + . ID=GSCOCG00027361001;Name=Cc01_g05560 | |
| 6661 chr1 manual_curation mRNA 21056129 21058293 . + . ID=GSCOCT00027361001;Parent=GSCOCG00027361001;Name=Cc01_g05560 | |
| 6662 chr1 manual_curation polypeptide 21056129 21058293 . + . ID=GSCOCP00027361001;Dbxref=InterPro:IPR005123,PFAM:PF03171,SwissProt:Q39112,SwissProt:Q9C971,SwissProt:Q9XHM5,TAIR:AT1G52790.1,TAIR:AT1G52820.1,TAIR:AT4G03070.1,TrEMBL:A5AJH9,TrEMBL:B9GL08,TrEMBL:D7U0Q6;Derives_from=GSCOCT00027361001;Name=Cc01_g05560;Ontology_term=CC_evidence_code:ISS,GO:0016491,CC_EC_number:1.14.11.9,PRODUCT:Putative Gibberellin 3-beta-dioxygenase 4,CC_functional_completeness:complete,CC_gene:At1g80330,CC_gene:20ox3,CC_gene:GA2OX2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027361001~ Putative Gibberellin 3-beta-dioxygenase 4~ At1g80330~ complete;original_location=join(942750..943120%2C944196..944517%2C944666..944914);owner=coffea | |
| 6663 chr1 manual_curation exon 21056129 21056499 . + . Parent=GSCOCT00027361001 | |
| 6664 chr1 manual_curation exon 21057575 21057896 . + . Parent=GSCOCT00027361001 | |
| 6665 chr1 manual_curation exon 21058045 21058293 . + . Parent=GSCOCT00027361001 | |
| 6666 chr1 manual_curation CDS 21056129 21056499 . + 0 Parent=GSCOCT00027361001 | |
| 6667 chr1 manual_curation CDS 21057575 21057896 . + 2 Parent=GSCOCT00027361001 | |
| 6668 chr1 manual_curation CDS 21058045 21058293 . + 0 Parent=GSCOCT00027361001 | |
| 6669 chr1 manual_curation gene 21210476 21216117 . + . ID=GSCOCG00027363001;Name=Cc01_g05570 | |
| 6670 chr1 manual_curation mRNA 21210476 21216117 . + . ID=GSCOCT00027363001;Parent=GSCOCG00027363001;Name=Cc01_g05570 | |
| 6671 chr1 manual_curation polypeptide 21210476 21215958 . + . ID=GSCOCP00027363001;Dbxref=InterPro:IPR005123,PFAM:PF03171,SwissProt:Q40062,SwissProt:Q96330,SwissProt:Q9C971,TAIR:AT1G52800.1,TAIR:AT1G52820.1,TAIR:AT4G03070.1,TrEMBL:A5AJH9,TrEMBL:B9GL08,TrEMBL:D7U0Q6;Derives_from=GSCOCT00027363001;Name=Cc01_g05570;Ontology_term=CC_evidence_code:ISS,GO:0016491,CC_EC_number:1.14.11.15,PRODUCT:Putative Flavonol synthase/flavanone 3-hydroxylase,CC_functional_completeness:complete,CC_gene:FLS1,CC_gene:At1g80330,CC_gene:IDS3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027363001~ Putative Flavonol synthase/flavanone 3-hydroxylase~ FLS1~ complete;original_location=join(1097097..1097467%2C1097657..1097978%2C1102331..1102579);owner=coffea | |
| 6672 chr1 manual_curation exon 21210476 21210846 . + . Parent=GSCOCT00027363001 | |
| 6673 chr1 manual_curation exon 21211036 21211357 . + . Parent=GSCOCT00027363001 | |
| 6674 chr1 manual_curation exon 21215710 21216117 . + . Parent=GSCOCT00027363001 | |
| 6675 chr1 manual_curation CDS 21210476 21210846 . + 0 Parent=GSCOCT00027363001 | |
| 6676 chr1 manual_curation CDS 21211036 21211357 . + 2 Parent=GSCOCT00027363001 | |
| 6677 chr1 manual_curation CDS 21215710 21215958 . + 0 Parent=GSCOCT00027363001 | |
| 6678 chr1 manual_curation gene 21242684 21246006 . + . ID=GSCOCG00027366001;Name=Cc01_g05580 | |
| 6679 chr1 manual_curation mRNA 21242684 21246006 . + . ID=GSCOCT00027366001;Parent=GSCOCG00027366001;Name=Cc01_g05580 | |
| 6680 chr1 manual_curation polypeptide 21242684 21246006 . + . ID=GSCOCP00027366001;Dbxref=InterPro:IPR005123,PFAM:PF03171,SwissProt:P24397,SwissProt:Q39224,SwissProt:Q40062,TAIR:AT4G10490.1,TAIR:AT4G10500.1,TAIR:AT5G24530.1,TrEMBL:B9H8K9,TrEMBL:B9T297,TrEMBL:Q8LKP6;Derives_from=GSCOCT00027366001;Name=Cc01_g05580;Ontology_term=CC_evidence_code:ISS,GO:0016491,CC_EC_number:1.14.11.11,PRODUCT:Putative Hyoscyamine 6-dioxygenase,CC_functional_completeness:complete,CC_gene:H6H,CC_gene:IDS3,CC_gene:SRG1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027366001~ Putative Hyoscyamine 6-dioxygenase~ H6H~ complete;original_location=join(1129305..1129499%2C1130960..1131195%2C1131427..1131462%2C1131529..1131733%2C1132129..1132243%2C1132485..1132627);owner=coffea | |
| 6681 chr1 manual_curation exon 21242684 21242878 . + . Parent=GSCOCT00027366001 | |
| 6682 chr1 manual_curation exon 21244339 21244574 . + . Parent=GSCOCT00027366001 | |
| 6683 chr1 manual_curation exon 21244806 21244841 . + . Parent=GSCOCT00027366001 | |
| 6684 chr1 manual_curation exon 21244908 21245112 . + . Parent=GSCOCT00027366001 | |
| 6685 chr1 manual_curation exon 21245508 21245622 . + . Parent=GSCOCT00027366001 | |
| 6686 chr1 manual_curation exon 21245864 21246006 . + . Parent=GSCOCT00027366001 | |
| 6687 chr1 manual_curation CDS 21242684 21242878 . + 0 Parent=GSCOCT00027366001 | |
| 6688 chr1 manual_curation CDS 21244339 21244574 . + 0 Parent=GSCOCT00027366001 | |
| 6689 chr1 manual_curation CDS 21244806 21244841 . + 2 Parent=GSCOCT00027366001 | |
| 6690 chr1 manual_curation CDS 21244908 21245112 . + 2 Parent=GSCOCT00027366001 | |
| 6691 chr1 manual_curation CDS 21245508 21245622 . + 0 Parent=GSCOCT00027366001 | |
| 6692 chr1 manual_curation CDS 21245864 21246006 . + 1 Parent=GSCOCT00027366001 | |
| 6693 chr1 manual_curation gene 21315627 21317273 . + . ID=GSCOCG00027367001;Name=Cc01_g05590 | |
| 6694 chr1 manual_curation mRNA 21315627 21317273 . + . ID=GSCOCT00027367001;Parent=GSCOCG00027367001;Name=Cc01_g05590 | |
| 6695 chr1 manual_curation polypeptide 21316772 21316957 . + . ID=GSCOCP00027367001;Derives_from=GSCOCT00027367001;Name=Cc01_g05590;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027367001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1203393..1203578;owner=coffea | |
| 6696 chr1 manual_curation exon 21315627 21317273 . + . Parent=GSCOCT00027367001 | |
| 6697 chr1 manual_curation CDS 21316772 21316957 . + 0 Parent=GSCOCT00027367001 | |
| 6698 chr1 manual_curation gene 21318935 21321969 . + . ID=GSCOCG00027368001;Name=Cc01_g05600 | |
| 6699 chr1 manual_curation mRNA 21318935 21321969 . + . ID=GSCOCT00027368001;Parent=GSCOCG00027368001;Name=Cc01_g05600 | |
| 6700 chr1 manual_curation polypeptide 21319012 21321639 . + . ID=GSCOCP00027368001;Dbxref=InterPro:IPR018450,PFAM:PF10247,TAIR:AT3G07910.1,TrEMBL:B9GG96,TrEMBL:B9HNF0,TrEMBL:D7T147;Derives_from=GSCOCT00027368001;Name=Cc01_g05600;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027368001~ FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Reactive oxygen species modulator 1 (InterPro:IPR018450)%3B Has 192 Blast hits to 192 proteins in 80 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 139%3B Fungi - 6%3B Plants - 39%3B Viruses - 0%3B Other Eukaryotes - 8 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(1205633..1205705%2C1205986..1206023%2C1208153..1208260);owner=coffea | |
| 6701 chr1 manual_curation exon 21318935 21319084 . + . Parent=GSCOCT00027368001 | |
| 6702 chr1 manual_curation exon 21319365 21319402 . + . Parent=GSCOCT00027368001 | |
| 6703 chr1 manual_curation exon 21321532 21321969 . + . Parent=GSCOCT00027368001 | |
| 6704 chr1 manual_curation CDS 21319012 21319084 . + 0 Parent=GSCOCT00027368001 | |
| 6705 chr1 manual_curation CDS 21319365 21319402 . + 1 Parent=GSCOCT00027368001 | |
| 6706 chr1 manual_curation CDS 21321532 21321639 . + 0 Parent=GSCOCT00027368001 | |
| 6707 chr1 manual_curation gene 21473812 21477657 . - . ID=GSCOCG00027370001;Name=Cc01_g05610 | |
| 6708 chr1 manual_curation mRNA 21473812 21477657 . - . ID=GSCOCT00027370001;Parent=GSCOCG00027370001;Name=Cc01_g05610 | |
| 6709 chr1 manual_curation polypeptide 21473812 21476045 . - . ID=GSCOCP00027370001;Dbxref=InterPro:IPR013057,PFAM:PF01490,SwissProt:P47082,TAIR:AT2G39130.1,TAIR:AT3G54830.1,TAIR:AT5G02170.1,TrEMBL:B9HUI4,TrEMBL:B9SY73,TrEMBL:F6HND9;Derives_from=GSCOCT00027370001;Name=Cc01_g05610;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Amino acid transporter%2C transmembrane,CC_functional_completeness:complete,CC_gene:AVT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027370001~ Putative Amino acid transporter%2C transmembrane~ AVT1~ complete;original_location=complement(join(1362570..1362666%2C1361492..1361554%2C1361227..1361331%2C1360433..1360716));owner=coffea | |
| 6710 chr1 manual_curation exon 21476947 21477657 . - . Parent=GSCOCT00027370001 | |
| 6711 chr1 manual_curation exon 21473812 21474095 . - . Parent=GSCOCT00027370001 | |
| 6712 chr1 manual_curation exon 21474606 21474710 . - . Parent=GSCOCT00027370001 | |
| 6713 chr1 manual_curation exon 21474871 21474933 . - . Parent=GSCOCT00027370001 | |
| 6714 chr1 manual_curation exon 21475949 21476086 . - . Parent=GSCOCT00027370001 | |
| 6715 chr1 manual_curation CDS 21473812 21474095 . - 1 Parent=GSCOCT00027370001 | |
| 6716 chr1 manual_curation CDS 21474606 21474710 . - 1 Parent=GSCOCT00027370001 | |
| 6717 chr1 manual_curation CDS 21474871 21474933 . - 1 Parent=GSCOCT00027370001 | |
| 6718 chr1 manual_curation CDS 21475949 21476045 . - 0 Parent=GSCOCT00027370001 | |
| 6719 chr1 manual_curation gene 21482508 21484028 . + . ID=GSCOCG00027371001;Name=Cc01_g05620 | |
| 6720 chr1 manual_curation mRNA 21482508 21484028 . + . ID=GSCOCT00027371001;Parent=GSCOCG00027371001;Name=Cc01_g05620 | |
| 6721 chr1 manual_curation polypeptide 21482508 21484028 . + . ID=GSCOCP00027371001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:A6YIH8,SwissProt:P93530,SwissProt:P93531,TAIR:AT3G26300.1,TAIR:AT3G26310.1,TAIR:AT3G26330.1,TrEMBL:A1XEK4,TrEMBL:C0IX26,TrEMBL:Q9AVQ2;Derives_from=GSCOCT00027371001;Name=Cc01_g05620;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.68,PRODUCT:Premnaspirodiene oxygenase,CC_functional_completeness:complete,CC_gene:CYP71D55,CC_gene:CYP71D7,CC_gene:CYP71D6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027371001~ Premnaspirodiene oxygenase~ CYP71D55~ complete;original_location=join(1369129..1369608%2C1369747..1369890%2C1370026..1370649);owner=coffea | |
| 6722 chr1 manual_curation exon 21482508 21482987 . + . Parent=GSCOCT00027371001 | |
| 6723 chr1 manual_curation exon 21483126 21483269 . + . Parent=GSCOCT00027371001 | |
| 6724 chr1 manual_curation exon 21483405 21484028 . + . Parent=GSCOCT00027371001 | |
| 6725 chr1 manual_curation CDS 21482508 21482987 . + 0 Parent=GSCOCT00027371001 | |
| 6726 chr1 manual_curation CDS 21483126 21483269 . + 0 Parent=GSCOCT00027371001 | |
| 6727 chr1 manual_curation CDS 21483405 21484028 . + 0 Parent=GSCOCT00027371001 | |
| 6728 chr1 manual_curation gene 21524713 21526353 . + . ID=GSCOCG00027372001;Name=Cc01_g05630 | |
| 6729 chr1 manual_curation mRNA 21524713 21526353 . + . ID=GSCOCT00027372001;Parent=GSCOCG00027372001;Name=Cc01_g05630 | |
| 6730 chr1 manual_curation polypeptide 21524713 21526353 . + . ID=GSCOCP00027372001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:A6YIH8,SwissProt:P93530,SwissProt:P93531,TAIR:AT1G13080.1,TAIR:AT3G26300.1,TAIR:AT3G26310.1,TrEMBL:A1XEK4,TrEMBL:C0IX26,TrEMBL:Q9AVQ2;Derives_from=GSCOCT00027372001;Name=Cc01_g05630;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.21,PRODUCT:Premnaspirodiene oxygenase,CC_functional_completeness:complete,CC_gene:CYP71D55,CC_gene:CYP71D7,CC_gene:CYP71D6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027372001~ Premnaspirodiene oxygenase~ CYP71D55~ complete;original_location=join(1411334..1412248%2C1412348..1412974);owner=coffea | |
| 6731 chr1 manual_curation exon 21524713 21525627 . + . Parent=GSCOCT00027372001 | |
| 6732 chr1 manual_curation exon 21525727 21526353 . + . Parent=GSCOCT00027372001 | |
| 6733 chr1 manual_curation CDS 21524713 21525627 . + 0 Parent=GSCOCT00027372001 | |
| 6734 chr1 manual_curation CDS 21525727 21526353 . + 0 Parent=GSCOCT00027372001 | |
| 6735 chr1 manual_curation gene 21528212 21531680 . - . ID=GSCOCG00027374001;Name=Cc01_g05640 | |
| 6736 chr1 manual_curation mRNA 21528212 21531680 . - . ID=GSCOCT00027374001;Parent=GSCOCG00027374001;Name=Cc01_g05640 | |
| 6737 chr1 manual_curation polypeptide 21528253 21530656 . - . ID=GSCOCP00027374001;Dbxref=TAIR:AT3G14190.1,TAIR:AT5G12360.1,TrEMBL:B9HNE9,TrEMBL:D7T146,TrEMBL:I1JIY5;Derives_from=GSCOCT00027374001;Name=Cc01_g05640;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027374001~ Putative unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14190.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(1417196..1417277%2C1416125..1416382%2C1415178..1415212%2C1414874..1415074));owner=coffea | |
| 6738 chr1 manual_curation exon 21531489 21531680 . - . Parent=GSCOCT00027374001 | |
| 6739 chr1 manual_curation exon 21528212 21528453 . - . Parent=GSCOCT00027374001 | |
| 6740 chr1 manual_curation exon 21528557 21528591 . - . Parent=GSCOCT00027374001 | |
| 6741 chr1 manual_curation exon 21529504 21529761 . - . Parent=GSCOCT00027374001 | |
| 6742 chr1 manual_curation exon 21530575 21530679 . - . Parent=GSCOCT00027374001 | |
| 6743 chr1 manual_curation CDS 21528253 21528453 . - 0 Parent=GSCOCT00027374001 | |
| 6744 chr1 manual_curation CDS 21528557 21528591 . - 1 Parent=GSCOCT00027374001 | |
| 6745 chr1 manual_curation CDS 21529504 21529761 . - 1 Parent=GSCOCT00027374001 | |
| 6746 chr1 manual_curation CDS 21530575 21530656 . - 0 Parent=GSCOCT00027374001 | |
| 6747 chr1 manual_curation gene 21532902 21533841 . + . ID=GSCOCG00027375001;Name=Cc01_g05650 | |
| 6748 chr1 manual_curation mRNA 21532902 21533841 . + . ID=GSCOCT00027375001;Parent=GSCOCG00027375001;Name=Cc01_g05650 | |
| 6749 chr1 manual_curation polypeptide 21533422 21533841 . + . ID=GSCOCP00027375001;Dbxref=TrEMBL:G7KIS7,TrEMBL:I1KF36,TrEMBL:I1LS03;Derives_from=GSCOCT00027375001;Name=Cc01_g05650;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027375001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1420043..1420462;owner=coffea | |
| 6750 chr1 manual_curation exon 21532902 21533841 . + . Parent=GSCOCT00027375001 | |
| 6751 chr1 manual_curation CDS 21533422 21533841 . + 0 Parent=GSCOCT00027375001 | |
| 6752 chr1 manual_curation gene 21641050 21644176 . - . ID=GSCOCG00027377001;Name=Cc01_g05660 | |
| 6753 chr1 manual_curation mRNA 21641050 21644176 . - . ID=GSCOCT00027377001;Parent=GSCOCG00027377001;Name=Cc01_g05660 | |
| 6754 chr1 manual_curation polypeptide 21641050 21644176 . - . ID=GSCOCP00027377001;Dbxref=InterPro:IPR000767,InterPro:IPR001611,InterPro:IPR002182,PFAM:PF00560,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q7XA40,SwissProt:Q7XA42,SwissProt:Q7XBQ9,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TAIR:AT3G50950.2,TrEMBL:B9N007,TrEMBL:F6HXL2,TrEMBL:F6HXM0;Derives_from=GSCOCT00027377001;Name=Cc01_g05660;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance protein RGA1,CC_functional_completeness:complete,CC_gene:RGA1,CC_gene:RGA2,CC_gene:RGA3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027377001~ Putative disease resistance protein RGA1~ RGA1~ complete;original_location=complement(join(1530482..1530797%2C1528030..1530165%2C1527671..1527969));owner=coffea | |
| 6755 chr1 manual_curation exon 21641050 21641348 . - . Parent=GSCOCT00027377001 | |
| 6756 chr1 manual_curation exon 21641409 21643544 . - . Parent=GSCOCT00027377001 | |
| 6757 chr1 manual_curation exon 21643861 21644176 . - . Parent=GSCOCT00027377001 | |
| 6758 chr1 manual_curation CDS 21641050 21641348 . - 1 Parent=GSCOCT00027377001 | |
| 6759 chr1 manual_curation CDS 21641409 21643544 . - 1 Parent=GSCOCT00027377001 | |
| 6760 chr1 manual_curation CDS 21643861 21644176 . - 0 Parent=GSCOCT00027377001 | |
| 6761 chr1 manual_curation gene 21737661 21739851 . + . ID=GSCOCG00027379001;Name=Cc01_g05670 | |
| 6762 chr1 manual_curation mRNA 21737661 21739851 . + . ID=GSCOCT00027379001;Parent=GSCOCG00027379001;Name=Cc01_g05670 | |
| 6763 chr1 manual_curation polypeptide 21737843 21739598 . + . ID=GSCOCP00027379001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:O23066,SwissProt:O81117,SwissProt:P98188,TAIR:AT1G34540.1,TAIR:AT2G27690.1,TAIR:AT3G56630.1,TrEMBL:B9SM19,TrEMBL:F6HA15,TrEMBL:Q5JKW8;Derives_from=GSCOCT00027379001;Name=Cc01_g05670;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.14.1,PRODUCT:Putative Cytochrome P450 94A1,CC_functional_completeness:complete,CC_gene:CYP94A1,CC_gene:CYP94A2,CC_gene:CYP86A2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027379001~ Putative Cytochrome P450 94A1~ CYP94A1~ complete;original_location=join(1624464..1624484%2C1624566..1625433%2C1625573..1626219);owner=coffea | |
| 6764 chr1 manual_curation exon 21737661 21737863 . + . Parent=GSCOCT00027379001 | |
| 6765 chr1 manual_curation exon 21737945 21738812 . + . Parent=GSCOCT00027379001 | |
| 6766 chr1 manual_curation exon 21738952 21739851 . + . Parent=GSCOCT00027379001 | |
| 6767 chr1 manual_curation CDS 21737843 21737863 . + 0 Parent=GSCOCT00027379001 | |
| 6768 chr1 manual_curation CDS 21737945 21738812 . + 0 Parent=GSCOCT00027379001 | |
| 6769 chr1 manual_curation CDS 21738952 21739598 . + 1 Parent=GSCOCT00027379001 | |
| 6770 chr1 manual_curation gene 21742917 21745056 . - . ID=GSCOCG00027380001;Name=Cc01_g05680 | |
| 6771 chr1 manual_curation mRNA 21742917 21745056 . - . ID=GSCOCT00027380001;Parent=GSCOCG00027380001;Name=Cc01_g05680 | |
| 6772 chr1 manual_curation polypeptide 21742917 21744845 . - . ID=GSCOCP00027380001;Dbxref=TAIR:AT3G57090.1,TAIR:AT5G12390.1,TrEMBL:C6T3T8,TrEMBL:D7T141,TrEMBL:I1N8T6;Derives_from=GSCOCT00027380001;Name=Cc01_g05680;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027380001~ Uncharacterized protein~ unknown_gene~ fragment;original_location=complement(join(1631374..1631466%2C1629538..1629795));owner=coffea | |
| 6773 chr1 manual_curation exon 21742917 21743174 . - . Parent=GSCOCT00027380001 | |
| 6774 chr1 manual_curation exon 21744753 21745056 . - . Parent=GSCOCT00027380001 | |
| 6775 chr1 manual_curation CDS 21742917 21743174 . - 0 Parent=GSCOCT00027380001 | |
| 6776 chr1 manual_curation CDS 21744753 21744845 . - 0 Parent=GSCOCT00027380001 | |
| 6777 chr1 manual_curation gene 21753453 21758969 . + . ID=GSCOCG00027381001;Name=Cc01_g05690 | |
| 6778 chr1 manual_curation mRNA 21753453 21758969 . + . ID=GSCOCT00027381001;Parent=GSCOCG00027381001;Name=Cc01_g05690 | |
| 6779 chr1 manual_curation polypeptide 21753557 21758001 . + . ID=GSCOCP00027381001;Dbxref=InterPro:IPR008521,PANTHER:PTHR12570,PFAM:PF05653,SwissProt:Q3SWX0,SwissProt:Q5R7Q3,SwissProt:Q8N8Q9,TAIR:AT1G34470.1,TAIR:AT1G71900.1,TAIR:AT4G38730.1,TrEMBL:D7T142,TrEMBL:I1JIY8,TrEMBL:I1M734;Derives_from=GSCOCT00027381001;Name=Cc01_g05690;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Magnesium transporter NIPA2,CC_functional_completeness:complete,CC_gene:NIPA2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027381001~ Putative Magnesium transporter NIPA2~ NIPA2~ complete;original_location=join(1640178..1640307%2C1640539..1640595%2C1640995..1641085%2C1641195..1641355%2C1641443..1641570%2C1642186..1642323%2C1644070..1644162%2C1644253..1644373%2C1644480..1644622);owner=coffea | |
| 6780 chr1 manual_curation exon 21753453 21753686 . + . Parent=GSCOCT00027381001 | |
| 6781 chr1 manual_curation exon 21753918 21753974 . + . Parent=GSCOCT00027381001 | |
| 6782 chr1 manual_curation exon 21754374 21754464 . + . Parent=GSCOCT00027381001 | |
| 6783 chr1 manual_curation exon 21754574 21754734 . + . Parent=GSCOCT00027381001 | |
| 6784 chr1 manual_curation exon 21754822 21754949 . + . Parent=GSCOCT00027381001 | |
| 6785 chr1 manual_curation exon 21755565 21755702 . + . Parent=GSCOCT00027381001 | |
| 6786 chr1 manual_curation exon 21757449 21757541 . + . Parent=GSCOCT00027381001 | |
| 6787 chr1 manual_curation exon 21757632 21757752 . + . Parent=GSCOCT00027381001 | |
| 6788 chr1 manual_curation exon 21757859 21758969 . + . Parent=GSCOCT00027381001 | |
| 6789 chr1 manual_curation CDS 21753557 21753686 . + 0 Parent=GSCOCT00027381001 | |
| 6790 chr1 manual_curation CDS 21753918 21753974 . + 1 Parent=GSCOCT00027381001 | |
| 6791 chr1 manual_curation CDS 21754374 21754464 . + 1 Parent=GSCOCT00027381001 | |
| 6792 chr1 manual_curation CDS 21754574 21754734 . + 2 Parent=GSCOCT00027381001 | |
| 6793 chr1 manual_curation CDS 21754822 21754949 . + 1 Parent=GSCOCT00027381001 | |
| 6794 chr1 manual_curation CDS 21755565 21755702 . + 0 Parent=GSCOCT00027381001 | |
| 6795 chr1 manual_curation CDS 21757449 21757541 . + 0 Parent=GSCOCT00027381001 | |
| 6796 chr1 manual_curation CDS 21757632 21757752 . + 0 Parent=GSCOCT00027381001 | |
| 6797 chr1 manual_curation CDS 21757859 21758001 . + 1 Parent=GSCOCT00027381001 | |
| 6798 chr1 manual_curation gene 21771371 21772435 . - . ID=GSCOCG00027384001;Name=Cc01_g05700 | |
| 6799 chr1 manual_curation mRNA 21771371 21772435 . - . ID=GSCOCT00027384001;Parent=GSCOCG00027384001;Name=Cc01_g05700 | |
| 6800 chr1 manual_curation polypeptide 21771371 21772435 . - . ID=GSCOCP00027384001;Dbxref=InterPro:IPR022364,SUPERFAMILY:SSF81383,SwissProt:O49508,SwissProt:Q9C534,SwissProt:Q9FNK5,TAIR:AT1G30200.2,TAIR:AT4G18380.1,TAIR:AT5G46170.1,TrEMBL:B9HP23,TrEMBL:B9SYQ6,TrEMBL:D7T139;Derives_from=GSCOCT00027384001;Name=Cc01_g05700;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative F-box protein At4g18380,CC_functional_completeness:complete,CC_gene:At4g18380,CC_gene:At5g46170,CC_gene:At1g30200;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027384001~ Putative F-box protein At4g18380~ At4g18380~ complete;original_location=complement(1657992..1659056);owner=coffea | |
| 6801 chr1 manual_curation exon 21771371 21772435 . - . Parent=GSCOCT00027384001 | |
| 6802 chr1 manual_curation CDS 21771371 21772435 . - 0 Parent=GSCOCT00027384001 | |
| 6803 chr1 manual_curation gene 21792958 21793711 . + . ID=GSCOCG00027385001;Name=Cc01_g05710 | |
| 6804 chr1 manual_curation mRNA 21792958 21793711 . + . ID=GSCOCT00027385001;Parent=GSCOCG00027385001;Name=Cc01_g05710 | |
| 6805 chr1 manual_curation polypeptide 21792958 21793711 . + . ID=GSCOCP00027385001;Dbxref=InterPro:IPR003340,PFAM:PF02362,PROFILE:PS50863,SwissProt:Q84R27,SwissProt:Q8L3W1,SwissProt:Q9ZSH7,TAIR:AT3G18960.1,TAIR:AT3G18990.1,TAIR:AT4G01580.1,TrEMBL:A5BWP2,TrEMBL:B9RZH1,TrEMBL:G7KVV4;Derives_from=GSCOCT00027385001;Name=Cc01_g05710;Ontology_term=CC_evidence_code:ISS,GO:0003677,CC_EC_number:missing_EC_number,PRODUCT:Putative B3 domain-containing transcription factor VRN1,CC_functional_completeness:fragment,CC_gene:At4g01580,CC_gene:At3g18960,CC_gene:VRN1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027385001~ Putative B3 domain-containing transcription factor VRN1~ At4g01580~ fragment;original_location=join(1679579..1679625%2C1679837..1679927%2C1680039..1680332);owner=coffea | |
| 6806 chr1 manual_curation exon 21792958 21793004 . + . Parent=GSCOCT00027385001 | |
| 6807 chr1 manual_curation exon 21793216 21793306 . + . Parent=GSCOCT00027385001 | |
| 6808 chr1 manual_curation exon 21793418 21793711 . + . Parent=GSCOCT00027385001 | |
| 6809 chr1 manual_curation CDS 21792958 21793004 . + 0 Parent=GSCOCT00027385001 | |
| 6810 chr1 manual_curation CDS 21793216 21793306 . + 2 Parent=GSCOCT00027385001 | |
| 6811 chr1 manual_curation CDS 21793418 21793711 . + 0 Parent=GSCOCT00027385001 | |
| 6812 chr1 manual_curation gene 21804473 21804805 . - . ID=GSCOCG00027387001;Name=Cc01_g05720 | |
| 6813 chr1 manual_curation mRNA 21804473 21804805 . - . ID=GSCOCT00027387001;Parent=GSCOCG00027387001;Name=Cc01_g05720 | |
| 6814 chr1 manual_curation polypeptide 21804473 21804805 . - . ID=GSCOCP00027387001;Dbxref=GENE3D:G3DSA:3.40.532.10,InterPro:IPR001578,PANTHER:PTHR10589,PFAM:PF01088,PRINTS:PR00707,SwissProt:P15374,SwissProt:Q2TBG8,SwissProt:Q9JKB1,TAIR:AT4G17510.1,TrEMBL:B9GYN0,TrEMBL:B9T288,TrEMBL:C6TJP0;Derives_from=GSCOCT00027387001;Name=Cc01_g05720;Ontology_term=CC_evidence_code:ISS,GO:0004221,GO:0005622,GO:0006511,CC_EC_number:3.4.19.12,PRODUCT:Putative Ubiquitin carboxyl-terminal hydrolase isozyme L3,CC_functional_completeness:fragment,CC_gene:UCHL3,CC_gene:Uchl3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027387001~ Putative Ubiquitin carboxyl-terminal hydrolase isozyme L3~ UCHL3~ fragment;original_location=complement(1691094..1691426);owner=coffea | |
| 6815 chr1 manual_curation exon 21804473 21804805 . - . Parent=GSCOCT00027387001 | |
| 6816 chr1 manual_curation CDS 21804473 21804805 . - 0 Parent=GSCOCT00027387001 | |
| 6817 chr1 manual_curation gene 21962850 21962966 . + . ID=GSCOCG00027389001;Name=Cc01_g05730 | |
| 6818 chr1 manual_curation mRNA 21962850 21962966 . + . ID=GSCOCT00027389001;Parent=GSCOCG00027389001;Name=Cc01_g05730 | |
| 6819 chr1 manual_curation polypeptide 21962850 21962966 . + . ID=GSCOCP00027389001;Derives_from=GSCOCT00027389001;Name=Cc01_g05730;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027389001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1849471..1849587;owner=coffea | |
| 6820 chr1 manual_curation exon 21962850 21962966 . + . Parent=GSCOCT00027389001 | |
| 6821 chr1 manual_curation CDS 21962850 21962966 . + 0 Parent=GSCOCT00027389001 | |
| 6822 chr1 manual_curation gene 21971832 21973887 . - . ID=GSCOCG00027391001;Name=Cc01_g05740 | |
| 6823 chr1 manual_curation mRNA 21971832 21973887 . - . ID=GSCOCT00027391001;Parent=GSCOCG00027391001;Name=Cc01_g05740 | |
| 6824 chr1 manual_curation polypeptide 21971999 21973719 . - . ID=GSCOCP00027391001;Dbxref=InterPro:IPR001810,InterPro:IPR006566,InterPro:IPR013596,InterPro:IPR022364,PFAM:PF00646,PFAM:PF08387,PROFILE:PS50181,SMART:SM00256,SMART:SM00579,SUPERFAMILY:SSF81383,SwissProt:Q8GW80,SwissProt:Q8L7H1,SwissProt:Q94B46,TAIR:AT3G59210.1,TAIR:AT4G14096.1,TAIR:AT4G14103.2,TrEMBL:A5BLF6,TrEMBL:F4JUK8,TrEMBL:F6HR85;Derives_from=GSCOCT00027391001;Name=Cc01_g05740;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative F-box/LRR-repeat protein At4g14096,CC_functional_completeness:complete,CC_gene:At4g14096,CC_gene:At4g14103,CC_gene:At3g59210;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027391001~ Putative F-box/LRR-repeat protein At4g14096~ At4g14096~ complete;original_location=complement(join(1859285..1860340%2C1859024..1859170%2C1858620..1858901));owner=coffea | |
| 6825 chr1 manual_curation exon 21971832 21972280 . - . Parent=GSCOCT00027391001 | |
| 6826 chr1 manual_curation exon 21972403 21972549 . - . Parent=GSCOCT00027391001 | |
| 6827 chr1 manual_curation exon 21972664 21973887 . - . Parent=GSCOCT00027391001 | |
| 6828 chr1 manual_curation CDS 21971999 21972280 . - 0 Parent=GSCOCT00027391001 | |
| 6829 chr1 manual_curation CDS 21972403 21972549 . - 0 Parent=GSCOCT00027391001 | |
| 6830 chr1 manual_curation CDS 21972664 21973719 . - 0 Parent=GSCOCT00027391001 | |
| 6831 chr1 manual_curation gene 21982498 21983636 . - . ID=GSCOCG00027392001;Name=Cc01_g05750 | |
| 6832 chr1 manual_curation mRNA 21982498 21983636 . - . ID=GSCOCT00027392001;Parent=GSCOCG00027392001;Name=Cc01_g05750 | |
| 6833 chr1 manual_curation polypeptide 21982850 21983636 . - . ID=GSCOCP00027392001;Dbxref=InterPro:IPR013596,PFAM:PF08387;Derives_from=GSCOCT00027392001;Name=Cc01_g05750;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027392001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1870165..1870257%2C1869907..1870050%2C1869471..1869755));owner=coffea | |
| 6834 chr1 manual_curation exon 21982498 21983134 . - . Parent=GSCOCT00027392001 | |
| 6835 chr1 manual_curation exon 21983286 21983429 . - . Parent=GSCOCT00027392001 | |
| 6836 chr1 manual_curation exon 21983544 21983636 . - . Parent=GSCOCT00027392001 | |
| 6837 chr1 manual_curation CDS 21982850 21983134 . - 0 Parent=GSCOCT00027392001 | |
| 6838 chr1 manual_curation CDS 21983286 21983429 . - 0 Parent=GSCOCT00027392001 | |
| 6839 chr1 manual_curation CDS 21983544 21983636 . - 0 Parent=GSCOCT00027392001 | |
| 6840 chr1 manual_curation gene 21983696 21984690 . - . ID=GSCOCG00027393001;Name=Cc01_g05760 | |
| 6841 chr1 manual_curation mRNA 21983696 21984690 . - . ID=GSCOCT00027393001;Parent=GSCOCG00027393001;Name=Cc01_g05760 | |
| 6842 chr1 manual_curation polypeptide 21983696 21984530 . - . ID=GSCOCP00027393001;Dbxref=InterPro:IPR001810,InterPro:IPR022364,PFAM:PF00646,SMART:SM00256,SUPERFAMILY:SSF81383,SwissProt:Q94B46,SwissProt:Q9FJ30,SwissProt:Q9LQC1,TAIR:AT1G58310.1,TAIR:AT4G14096.1,TAIR:AT5G41840.1;Derives_from=GSCOCT00027393001;Name=Cc01_g05760;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:At4g14096,CC_gene:At5g41840,CC_gene:At1g58310;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027393001~ Hypothetical protein~ At4g14096~ missing_functional_completeness;original_location=complement(join(1870885..1871151%2C1870317..1870337));owner=coffea | |
| 6843 chr1 manual_curation exon 21983696 21983716 . - . Parent=GSCOCT00027393001 | |
| 6844 chr1 manual_curation exon 21984264 21984690 . - . Parent=GSCOCT00027393001 | |
| 6845 chr1 manual_curation CDS 21983696 21983716 . - 0 Parent=GSCOCT00027393001 | |
| 6846 chr1 manual_curation CDS 21984264 21984530 . - 0 Parent=GSCOCT00027393001 | |
| 6847 chr1 manual_curation gene 21991682 21993114 . - . ID=GSCOCG00027395001;Name=Cc01_g05770 | |
| 6848 chr1 manual_curation mRNA 21991682 21993114 . - . ID=GSCOCT00027395001;Parent=GSCOCG00027395001;Name=Cc01_g05770 | |
| 6849 chr1 manual_curation polypeptide 21992908 21993114 . - . ID=GSCOCP00027395001;Derives_from=GSCOCT00027395001;Name=Cc01_g05770;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027395001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(1879529..1879735);owner=coffea | |
| 6850 chr1 manual_curation exon 21991682 21993114 . - . Parent=GSCOCT00027395001 | |
| 6851 chr1 manual_curation CDS 21992908 21993114 . - 0 Parent=GSCOCT00027395001 | |
| 6852 chr1 manual_curation gene 22005457 22011513 . + . ID=GSCOCG00027396001;Name=Cc01_g05780 | |
| 6853 chr1 manual_curation mRNA 22005457 22011513 . + . ID=GSCOCT00027396001;Parent=GSCOCG00027396001;Name=Cc01_g05780 | |
| 6854 chr1 manual_curation polypeptide 22005729 22011182 . + . ID=GSCOCP00027396001;Dbxref=GENE3D:G3DSA:3.40.30.10,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR013766,InterPro:IPR017936,InterPro:IPR017937,PFAM:PF00085,PRINTS:PR00421,PROFILE:PS51352,PROSITE:PS00194,SUPERFAMILY:SSF52833,SwissProt:Q0E0I1,SwissProt:Q0JD42,SwissProt:Q94F09,TAIR:AT1G21750.1,TAIR:AT1G35620.1,TAIR:AT1G77510.1,TrEMBL:B9MW92,TrEMBL:B9T6K9,TrEMBL:G9BMP4;Derives_from=GSCOCT00027396001;Name=Cc01_g05780;Ontology_term=CC_evidence_code:ISS,GO:0045454,CC_EC_number:5.3.4.1,PRODUCT:Protein disulfide-isomerase 5-2,CC_functional_completeness:complete,CC_gene:PDIL5-2,CC_gene:PDIL5-3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027396001~ Protein disulfide-isomerase 5-2~ PDIL5-2~ complete;original_location=join(1892350..1892514%2C1893022..1893125%2C1893857..1894227%2C1896419..1896726%2C1897489..1897803);owner=coffea | |
| 6855 chr1 manual_curation exon 22005457 22005893 . + . Parent=GSCOCT00027396001 | |
| 6856 chr1 manual_curation exon 22006401 22006504 . + . Parent=GSCOCT00027396001 | |
| 6857 chr1 manual_curation exon 22007236 22007606 . + . Parent=GSCOCT00027396001 | |
| 6858 chr1 manual_curation exon 22009798 22010105 . + . Parent=GSCOCT00027396001 | |
| 6859 chr1 manual_curation exon 22010868 22011513 . + . Parent=GSCOCT00027396001 | |
| 6860 chr1 manual_curation CDS 22005729 22005893 . + 0 Parent=GSCOCT00027396001 | |
| 6861 chr1 manual_curation CDS 22006401 22006504 . + 0 Parent=GSCOCT00027396001 | |
| 6862 chr1 manual_curation CDS 22007236 22007606 . + 2 Parent=GSCOCT00027396001 | |
| 6863 chr1 manual_curation CDS 22009798 22010105 . + 1 Parent=GSCOCT00027396001 | |
| 6864 chr1 manual_curation CDS 22010868 22011182 . + 0 Parent=GSCOCT00027396001 | |
| 6865 chr1 manual_curation gene 22015179 22018726 . - . ID=GSCOCG00027397001;Name=Cc01_g05790 | |
| 6866 chr1 manual_curation mRNA 22015179 22018726 . - . ID=GSCOCT00027397001;Parent=GSCOCG00027397001;Name=Cc01_g05790 | |
| 6867 chr1 manual_curation polypeptide 22015480 22018684 . - . ID=GSCOCP00027397001;Dbxref=GENE3D:G3DSA:3.40.640.10,InterPro:IPR000192,InterPro:IPR015421,InterPro:IPR015424,InterPro:IPR020578,PFAM:PF00266,PROSITE:PS00595,SUPERFAMILY:SSF53383,SwissProt:O08374,SwissProt:P55819,SwissProt:Q56YA5,TAIR:AT2G13360.1,TrEMBL:B9GIG2,TrEMBL:B9HP22,TrEMBL:G8Z261;Derives_from=GSCOCT00027397001;Name=Cc01_g05790;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,GO:0030170,CC_EC_number:2.6.1.45,PRODUCT:Serine--glyoxylate aminotransferase,CC_functional_completeness:complete,CC_gene:AGT1,CC_gene:sgaA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027397001~ Serine--glyoxylate aminotransferase~ AGT1~ complete;original_location=complement(join(1905101..1905305%2C1904090..1904374%2C1902893..1903259%2C1902465..1902675%2C1902101..1902238));owner=coffea | |
| 6868 chr1 manual_curation exon 22015179 22015617 . - . Parent=GSCOCT00027397001 | |
| 6869 chr1 manual_curation exon 22015844 22016054 . - . Parent=GSCOCT00027397001 | |
| 6870 chr1 manual_curation exon 22016272 22016638 . - . Parent=GSCOCT00027397001 | |
| 6871 chr1 manual_curation exon 22017469 22017753 . - . Parent=GSCOCT00027397001 | |
| 6872 chr1 manual_curation exon 22018480 22018726 . - . Parent=GSCOCT00027397001 | |
| 6873 chr1 manual_curation CDS 22015480 22015617 . - 0 Parent=GSCOCT00027397001 | |
| 6874 chr1 manual_curation CDS 22015844 22016054 . - 2 Parent=GSCOCT00027397001 | |
| 6875 chr1 manual_curation CDS 22016272 22016638 . - 1 Parent=GSCOCT00027397001 | |
| 6876 chr1 manual_curation CDS 22017469 22017753 . - 1 Parent=GSCOCT00027397001 | |
| 6877 chr1 manual_curation CDS 22018480 22018684 . - 0 Parent=GSCOCT00027397001 | |
| 6878 chr1 manual_curation gene 22041870 22043990 . - . ID=GSCOCG00027401001;Name=Cc01_g05800 | |
| 6879 chr1 manual_curation mRNA 22041870 22043990 . - . ID=GSCOCT00027401001;Parent=GSCOCG00027401001;Name=Cc01_g05800 | |
| 6880 chr1 manual_curation polypeptide 22041870 22043990 . - . ID=GSCOCP00027401001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q9LNP2,SwissProt:Q9LNU6,SwissProt:Q9SIT7,TAIR:AT1G17630.1,TAIR:AT1G20230.1,TAIR:AT2G13600.1,TIGRFAMs:TIGR00756,TrEMBL:A5B4B4,TrEMBL:D7U009,TrEMBL:I1MQQ2;Derives_from=GSCOCT00027401001;Name=Cc01_g05800;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative pentatricopeptide repeat-containing protein At1g17630,CC_functional_completeness:complete,CC_gene:PCMP-E72,CC_gene:PCMP-H21,CC_gene:PCMP-E76;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027401001~ Putative pentatricopeptide repeat-containing protein At1g17630~ PCMP-E72~ complete;original_location=complement(1928491..1930611);owner=coffea | |
| 6881 chr1 manual_curation exon 22041870 22043990 . - . Parent=GSCOCT00027401001 | |
| 6882 chr1 manual_curation CDS 22041870 22043990 . - 0 Parent=GSCOCT00027401001 | |
| 6883 chr1 manual_curation gene 22044483 22066161 . - . ID=GSCOCG00027403001;Name=Cc01_g05810 | |
| 6884 chr1 manual_curation mRNA 22044483 22066161 . - . ID=GSCOCT00027403001;Parent=GSCOCG00027403001;Name=Cc01_g05810 | |
| 6885 chr1 manual_curation polypeptide 22044940 22065336 . - . ID=GSCOCP00027403001;Dbxref=InterPro:IPR000330,InterPro:IPR000953,InterPro:IPR001650,InterPro:IPR009057,InterPro:IPR014001,InterPro:IPR014021,InterPro:IPR016197,PFAM:PF00176,PFAM:PF00271,PFAM:PF00385,PROFILE:PS50013,PROFILE:PS51192,PROFILE:PS51194,SMART:SM00298,SMART:SM00487,SMART:SM00490,SUPERFAMILY:SSF46689,SUPERFAMILY:SSF54160,SwissProt:B6ZLK2,SwissProt:O14646,SwissProt:O14647,TAIR:AT2G13370.1,TAIR:AT2G25170.1,TAIR:AT4G31900.1,TrEMBL:F6HA08,TrEMBL:I1JIZ0,TrEMBL:I1M733;Derives_from=GSCOCT00027403001;Name=Cc01_g05810;Ontology_term=CC_evidence_code:ISS,GO:0000785,GO:0003676,GO:0003677,GO:0003682,GO:0004386,GO:0005524,GO:0005634,GO:0006333,CC_EC_number:missing_EC_number,PRODUCT:chromatin remodeling 5,CC_functional_completeness:complete,CC_gene:CHD2,CC_gene:CHD1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027403001~ chromatin remodeling 5~ CHD2~ complete;original_location=complement(join(1951327..1951957%2C1951152..1951219%2C1946748..1947194%2C1945705..1945929%2C1945477..1945560%2C1944646..1944705%2C1944468..1944571%2C1944174..1944225%2C1942800..1942863%2C1941261..1941354%2C1941055..1941142%2C1940839..1940973%2C1939996..1940187%2C1939845..1939912%2C1939063..1939156%2C1938844..1938968%2C1938687..1938750%2C1938115..1938327%2C1937084..1937326%2C1936869..1936979%2C1936558..1936644%2C1936070..1936258%2C1935708..1935788%2C1935391..1935624%2C1934963..1935118%2C1934661..1934838%2C1934372..1934553%2C1932285..1932638%2C1932101..1932194%2C1931561..1931982));owner=coffea | |
| 6886 chr1 manual_curation exon 22065886 22066161 . - . Parent=GSCOCT00027403001 | |
| 6887 chr1 manual_curation exon 22044483 22045361 . - . Parent=GSCOCT00027403001 | |
| 6888 chr1 manual_curation exon 22045480 22045573 . - . Parent=GSCOCT00027403001 | |
| 6889 chr1 manual_curation exon 22045664 22046017 . - . Parent=GSCOCT00027403001 | |
| 6890 chr1 manual_curation exon 22047751 22047932 . - . Parent=GSCOCT00027403001 | |
| 6891 chr1 manual_curation exon 22048040 22048217 . - . Parent=GSCOCT00027403001 | |
| 6892 chr1 manual_curation exon 22048342 22048497 . - . Parent=GSCOCT00027403001 | |
| 6893 chr1 manual_curation exon 22048770 22049003 . - . Parent=GSCOCT00027403001 | |
| 6894 chr1 manual_curation exon 22049087 22049167 . - . Parent=GSCOCT00027403001 | |
| 6895 chr1 manual_curation exon 22049449 22049637 . - . Parent=GSCOCT00027403001 | |
| 6896 chr1 manual_curation exon 22049937 22050023 . - . Parent=GSCOCT00027403001 | |
| 6897 chr1 manual_curation exon 22050248 22050358 . - . Parent=GSCOCT00027403001 | |
| 6898 chr1 manual_curation exon 22050463 22050705 . - . Parent=GSCOCT00027403001 | |
| 6899 chr1 manual_curation exon 22051494 22051706 . - . Parent=GSCOCT00027403001 | |
| 6900 chr1 manual_curation exon 22052066 22052129 . - . Parent=GSCOCT00027403001 | |
| 6901 chr1 manual_curation exon 22052223 22052347 . - . Parent=GSCOCT00027403001 | |
| 6902 chr1 manual_curation exon 22052442 22052535 . - . Parent=GSCOCT00027403001 | |
| 6903 chr1 manual_curation exon 22053224 22053291 . - . Parent=GSCOCT00027403001 | |
| 6904 chr1 manual_curation exon 22053375 22053566 . - . Parent=GSCOCT00027403001 | |
| 6905 chr1 manual_curation exon 22054218 22054352 . - . Parent=GSCOCT00027403001 | |
| 6906 chr1 manual_curation exon 22054434 22054521 . - . Parent=GSCOCT00027403001 | |
| 6907 chr1 manual_curation exon 22054640 22054733 . - . Parent=GSCOCT00027403001 | |
| 6908 chr1 manual_curation exon 22056179 22056242 . - . Parent=GSCOCT00027403001 | |
| 6909 chr1 manual_curation exon 22057553 22057604 . - . Parent=GSCOCT00027403001 | |
| 6910 chr1 manual_curation exon 22057847 22057950 . - . Parent=GSCOCT00027403001 | |
| 6911 chr1 manual_curation exon 22058025 22058084 . - . Parent=GSCOCT00027403001 | |
| 6912 chr1 manual_curation exon 22058856 22058939 . - . Parent=GSCOCT00027403001 | |
| 6913 chr1 manual_curation exon 22059084 22059308 . - . Parent=GSCOCT00027403001 | |
| 6914 chr1 manual_curation exon 22060127 22060573 . - . Parent=GSCOCT00027403001 | |
| 6915 chr1 manual_curation exon 22064531 22064598 . - . Parent=GSCOCT00027403001 | |
| 6916 chr1 manual_curation exon 22064706 22065468 . - . Parent=GSCOCT00027403001 | |
| 6917 chr1 manual_curation CDS 22044940 22045361 . - 1 Parent=GSCOCT00027403001 | |
| 6918 chr1 manual_curation CDS 22045480 22045573 . - 0 Parent=GSCOCT00027403001 | |
| 6919 chr1 manual_curation CDS 22045664 22046017 . - 0 Parent=GSCOCT00027403001 | |
| 6920 chr1 manual_curation CDS 22047751 22047932 . - 1 Parent=GSCOCT00027403001 | |
| 6921 chr1 manual_curation CDS 22048040 22048217 . - 0 Parent=GSCOCT00027403001 | |
| 6922 chr1 manual_curation CDS 22048342 22048497 . - 0 Parent=GSCOCT00027403001 | |
| 6923 chr1 manual_curation CDS 22048770 22049003 . - 0 Parent=GSCOCT00027403001 | |
| 6924 chr1 manual_curation CDS 22049087 22049167 . - 0 Parent=GSCOCT00027403001 | |
| 6925 chr1 manual_curation CDS 22049449 22049637 . - 0 Parent=GSCOCT00027403001 | |
| 6926 chr1 manual_curation CDS 22049937 22050023 . - 0 Parent=GSCOCT00027403001 | |
| 6927 chr1 manual_curation CDS 22050248 22050358 . - 0 Parent=GSCOCT00027403001 | |
| 6928 chr1 manual_curation CDS 22050463 22050705 . - 0 Parent=GSCOCT00027403001 | |
| 6929 chr1 manual_curation CDS 22051494 22051706 . - 0 Parent=GSCOCT00027403001 | |
| 6930 chr1 manual_curation CDS 22052066 22052129 . - 2 Parent=GSCOCT00027403001 | |
| 6931 chr1 manual_curation CDS 22052223 22052347 . - 0 Parent=GSCOCT00027403001 | |
| 6932 chr1 manual_curation CDS 22052442 22052535 . - 2 Parent=GSCOCT00027403001 | |
| 6933 chr1 manual_curation CDS 22053224 22053291 . - 0 Parent=GSCOCT00027403001 | |
| 6934 chr1 manual_curation CDS 22053375 22053566 . - 0 Parent=GSCOCT00027403001 | |
| 6935 chr1 manual_curation CDS 22054218 22054352 . - 0 Parent=GSCOCT00027403001 | |
| 6936 chr1 manual_curation CDS 22054434 22054521 . - 2 Parent=GSCOCT00027403001 | |
| 6937 chr1 manual_curation CDS 22054640 22054733 . - 1 Parent=GSCOCT00027403001 | |
| 6938 chr1 manual_curation CDS 22056179 22056242 . - 0 Parent=GSCOCT00027403001 | |
| 6939 chr1 manual_curation CDS 22057553 22057604 . - 2 Parent=GSCOCT00027403001 | |
| 6940 chr1 manual_curation CDS 22057847 22057950 . - 0 Parent=GSCOCT00027403001 | |
| 6941 chr1 manual_curation CDS 22058025 22058084 . - 0 Parent=GSCOCT00027403001 | |
| 6942 chr1 manual_curation CDS 22058856 22058939 . - 0 Parent=GSCOCT00027403001 | |
| 6943 chr1 manual_curation CDS 22059084 22059308 . - 0 Parent=GSCOCT00027403001 | |
| 6944 chr1 manual_curation CDS 22060127 22060573 . - 0 Parent=GSCOCT00027403001 | |
| 6945 chr1 manual_curation CDS 22064531 22064598 . - 1 Parent=GSCOCT00027403001 | |
| 6946 chr1 manual_curation CDS 22064706 22065336 . - 0 Parent=GSCOCT00027403001 | |
| 6947 chr1 manual_curation gene 22097785 22105517 . - . ID=GSCOCG00027404001;Name=Cc01_g05820 | |
| 6948 chr1 manual_curation mRNA 22097785 22105517 . - . ID=GSCOCT00027404001;Parent=GSCOCG00027404001;Name=Cc01_g05820 | |
| 6949 chr1 manual_curation polypeptide 22098175 22105358 . - . ID=GSCOCP00027404001;Dbxref=GENE3D:G3DSA:2.30.22.10,GENE3D:G3DSA:3.90.20.20,HAMAP:MF_01151,InterPro:IPR000740,InterPro:IPR009012,InterPro:IPR013805,PANTHER:PTHR21237,PFAM:PF01025,PRINTS:PR00773,PROSITE:PS01071,SUPERFAMILY:SSF51064,SwissProt:A2C5L7,SwissProt:Q7V9C9,SwissProt:Q8DJB3,TAIR:AT1G36390.1,TAIR:AT5G17710.2,TrEMBL:B9GUH1,TrEMBL:B9RJC6,TrEMBL:E0CRD7;Derives_from=GSCOCT00027404001;Name=Cc01_g05820;Ontology_term=CC_evidence_code:ISS,GO:0000774,GO:0005515,GO:0005739,GO:0006457,GO:0030150,GO:0042803,GO:0051087,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein grpE,CC_functional_completeness:modules,CC_gene:grpE;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027404001~ Putative Protein grpE~ grpE~ modules;original_location=complement(join(1991728..1991979%2C1990428..1990931%2C1984796..1985026));owner=coffea | |
| 6950 chr1 manual_curation exon 22097785 22098405 . - . Parent=GSCOCT00027404001 | |
| 6951 chr1 manual_curation exon 22103807 22104310 . - . Parent=GSCOCT00027404001 | |
| 6952 chr1 manual_curation exon 22105107 22105517 . - . Parent=GSCOCT00027404001 | |
| 6953 chr1 manual_curation CDS 22098175 22098405 . - 0 Parent=GSCOCT00027404001 | |
| 6954 chr1 manual_curation CDS 22103807 22104310 . - 0 Parent=GSCOCT00027404001 | |
| 6955 chr1 manual_curation CDS 22105107 22105358 . - 0 Parent=GSCOCT00027404001 | |
| 6956 chr1 manual_curation gene 22138893 22144873 . + . ID=GSCOCG00027407001;Name=Cc01_g05830 | |
| 6957 chr1 manual_curation mRNA 22138893 22144873 . + . ID=GSCOCT00027407001;Parent=GSCOCG00027407001;Name=Cc01_g05830 | |
| 6958 chr1 manual_curation polypeptide 22138986 22144730 . + . ID=GSCOCP00027407001;Dbxref=InterPro:IPR009249,PFAM:PF05996,SwissProt:Q10UW6,SwissProt:Q93TM8,SwissProt:Q9SR43,TAIR:AT3G09150.2,TrEMBL:B9RSJ6,TrEMBL:F6HA07,TrEMBL:Q588D6;Derives_from=GSCOCT00027407001;Name=Cc01_g05830;Ontology_term=CC_evidence_code:ISS,GO:0010024,GO:0050897,GO:0055114,CC_EC_number:1.3.7.4,PRODUCT:Phytochromobilin,CC_functional_completeness:complete,CC_gene:HY2,CC_gene:pebB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027407001~ Phytochromobilin:ferredoxin oxidoreductase%2C chloroplastic~ HY2~ complete;original_location=join(2025607..2025644%2C2025803..2025959%2C2026879..2026998%2C2028212..2028306%2C2029394..2029487%2C2029592..2029723%2C2030139..2030243%2C2031035..2031085%2C2031163..2031351);owner=coffea | |
| 6959 chr1 manual_curation exon 22138893 22139023 . + . Parent=GSCOCT00027407001 | |
| 6960 chr1 manual_curation exon 22139182 22139338 . + . Parent=GSCOCT00027407001 | |
| 6961 chr1 manual_curation exon 22140258 22140377 . + . Parent=GSCOCT00027407001 | |
| 6962 chr1 manual_curation exon 22141591 22141685 . + . Parent=GSCOCT00027407001 | |
| 6963 chr1 manual_curation exon 22142773 22142866 . + . Parent=GSCOCT00027407001 | |
| 6964 chr1 manual_curation exon 22142971 22143102 . + . Parent=GSCOCT00027407001 | |
| 6965 chr1 manual_curation exon 22143518 22143622 . + . Parent=GSCOCT00027407001 | |
| 6966 chr1 manual_curation exon 22144414 22144464 . + . Parent=GSCOCT00027407001 | |
| 6967 chr1 manual_curation exon 22144542 22144873 . + . Parent=GSCOCT00027407001 | |
| 6968 chr1 manual_curation CDS 22138986 22139023 . + 0 Parent=GSCOCT00027407001 | |
| 6969 chr1 manual_curation CDS 22139182 22139338 . + 2 Parent=GSCOCT00027407001 | |
| 6970 chr1 manual_curation CDS 22140258 22140377 . + 0 Parent=GSCOCT00027407001 | |
| 6971 chr1 manual_curation CDS 22141591 22141685 . + 0 Parent=GSCOCT00027407001 | |
| 6972 chr1 manual_curation CDS 22142773 22142866 . + 2 Parent=GSCOCT00027407001 | |
| 6973 chr1 manual_curation CDS 22142971 22143102 . + 0 Parent=GSCOCT00027407001 | |
| 6974 chr1 manual_curation CDS 22143518 22143622 . + 0 Parent=GSCOCT00027407001 | |
| 6975 chr1 manual_curation CDS 22144414 22144464 . + 0 Parent=GSCOCT00027407001 | |
| 6976 chr1 manual_curation CDS 22144542 22144730 . + 0 Parent=GSCOCT00027407001 | |
| 6977 chr1 manual_curation gene 22155777 22156802 . + . ID=GSCOCG00027410001;Name=Cc01_g05840 | |
| 6978 chr1 manual_curation mRNA 22155777 22156802 . + . ID=GSCOCT00027410001;Parent=GSCOCG00027410001;Name=Cc01_g05840 | |
| 6979 chr1 manual_curation polypeptide 22156005 22156802 . + . ID=GSCOCP00027410001;Dbxref=InterPro:IPR004316,InterPro:IPR018169,InterPro:IPR018179,PANTHER:PTHR10791,PANTHER:PTHR10791:SF6,PFAM:PF03083,SwissProt:Q0DJY3,SwissProt:Q5NAZ9,SwissProt:Q6NQN5,TAIR:AT1G21460.1,TAIR:AT5G40260.1,TAIR:AT5G53190.1,TrEMBL:B9I542,TrEMBL:B9N982,TrEMBL:E0CUJ5;Derives_from=GSCOCT00027410001;Name=Cc01_g05840;Ontology_term=CC_evidence_code:ISS,GO:0016020,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Bidirectional sugar transporter SWEET3b,CC_functional_completeness:fragment,CC_gene:SWEET3B,CC_gene:SWEET3,CC_gene:SWEET3A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027410001~ Bidirectional sugar transporter SWEET3b~ SWEET3B~ fragment;original_location=join(2042626..2042662%2C2042770..2042806%2C2043180..2043423);owner=coffea | |
| 6980 chr1 manual_curation exon 22155777 22156041 . + . Parent=GSCOCT00027410001 | |
| 6981 chr1 manual_curation exon 22156149 22156185 . + . Parent=GSCOCT00027410001 | |
| 6982 chr1 manual_curation exon 22156559 22156802 . + . Parent=GSCOCT00027410001 | |
| 6983 chr1 manual_curation CDS 22156005 22156041 . + 0 Parent=GSCOCT00027410001 | |
| 6984 chr1 manual_curation CDS 22156149 22156185 . + 1 Parent=GSCOCT00027410001 | |
| 6985 chr1 manual_curation CDS 22156559 22156802 . + 2 Parent=GSCOCT00027410001 | |
| 6986 chr1 manual_curation gene 22157259 22160290 . + . ID=GSCOCG00027411001;Name=Cc01_g05850 | |
| 6987 chr1 manual_curation mRNA 22157259 22160290 . + . ID=GSCOCT00027411001;Parent=GSCOCG00027411001;Name=Cc01_g05850 | |
| 6988 chr1 manual_curation polypeptide 22157259 22160078 . + . ID=GSCOCP00027411001;Dbxref=InterPro:IPR004316,InterPro:IPR018169,InterPro:IPR018179,PANTHER:PTHR10791,PANTHER:PTHR10791:SF6,PFAM:PF03083,SwissProt:Q0DJY3,SwissProt:Q5NAZ9,SwissProt:Q6NQN5,TAIR:AT1G21460.1,TAIR:AT1G66770.1,TAIR:AT5G53190.1,TrEMBL:B9I542,TrEMBL:B9RIL5,TrEMBL:E0CUJ5;Derives_from=GSCOCT00027411001;Name=Cc01_g05850;Ontology_term=CC_evidence_code:ISS,GO:0016020,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Putative Bidirectional sugar transporter SWEET3,CC_functional_completeness:fragment,CC_gene:SWEET3,CC_gene:SWEET3B,CC_gene:SWEET3A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027411001~ Putative Bidirectional sugar transporter SWEET3~ SWEET3~ fragment;original_location=join(2043880..2044038%2C2044132..2044293%2C2046250..2046369%2C2046481..2046699);owner=coffea | |
| 6989 chr1 manual_curation exon 22157259 22157417 . + . Parent=GSCOCT00027411001 | |
| 6990 chr1 manual_curation exon 22157511 22157672 . + . Parent=GSCOCT00027411001 | |
| 6991 chr1 manual_curation exon 22159629 22159748 . + . Parent=GSCOCT00027411001 | |
| 6992 chr1 manual_curation exon 22159860 22160290 . + . Parent=GSCOCT00027411001 | |
| 6993 chr1 manual_curation CDS 22157259 22157417 . + 0 Parent=GSCOCT00027411001 | |
| 6994 chr1 manual_curation CDS 22157511 22157672 . + 0 Parent=GSCOCT00027411001 | |
| 6995 chr1 manual_curation CDS 22159629 22159748 . + 0 Parent=GSCOCT00027411001 | |
| 6996 chr1 manual_curation CDS 22159860 22160078 . + 0 Parent=GSCOCT00027411001 | |
| 6997 chr1 manual_curation gene 22217928 22221008 . + . ID=GSCOCG00027413001;Name=Cc01_g05860 | |
| 6998 chr1 manual_curation mRNA 22217928 22221008 . + . ID=GSCOCT00027413001;Parent=GSCOCG00027413001;Name=Cc01_g05860 | |
| 6999 chr1 manual_curation polypeptide 22217928 22221008 . + . ID=GSCOCP00027413001;Dbxref=GENE3D:G3DSA:3.90.470.10,InterPro:IPR000008,InterPro:IPR001063,InterPro:IPR005721,InterPro:IPR008973,InterPro:IPR018029,InterPro:IPR018260,PANTHER:PTHR11593,PFAM:PF00168,PFAM:PF00237,PROFILE:PS50004,PROSITE:PS00464,SUPERFAMILY:SSF49562,SUPERFAMILY:SSF54843,SwissProt:P35266,TAIR:AT1G66360.1;Derives_from=GSCOCT00027413001;Name=Cc01_g05860;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,GO:0015934,CC_EC_number:missing_EC_number,PRODUCT:Putative Ribosomal protein L22/L17,CC_functional_completeness:complete,CC_gene:RPL17B,CC_gene:RPL17A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027413001~ Putative Ribosomal protein L22/L17~ RPL17B~ complete;original_location=join(2104549..2104602%2C2104685..2104787%2C2104870..2104937%2C2106919..2107014%2C2107492..2107629);owner=coffea | |
| 7000 chr1 manual_curation exon 22217928 22217981 . + . Parent=GSCOCT00027413001 | |
| 7001 chr1 manual_curation exon 22218064 22218166 . + . Parent=GSCOCT00027413001 | |
| 7002 chr1 manual_curation exon 22218249 22218316 . + . Parent=GSCOCT00027413001 | |
| 7003 chr1 manual_curation exon 22220298 22220393 . + . Parent=GSCOCT00027413001 | |
| 7004 chr1 manual_curation exon 22220871 22221008 . + . Parent=GSCOCT00027413001 | |
| 7005 chr1 manual_curation CDS 22217928 22217981 . + 0 Parent=GSCOCT00027413001 | |
| 7006 chr1 manual_curation CDS 22218064 22218166 . + 0 Parent=GSCOCT00027413001 | |
| 7007 chr1 manual_curation CDS 22218249 22218316 . + 1 Parent=GSCOCT00027413001 | |
| 7008 chr1 manual_curation CDS 22220298 22220393 . + 0 Parent=GSCOCT00027413001 | |
| 7009 chr1 manual_curation CDS 22220871 22221008 . + 0 Parent=GSCOCT00027413001 | |
| 7010 chr1 manual_curation gene 22235977 22238817 . + . ID=GSCOCG00027414001;Name=Cc01_g05870 | |
| 7011 chr1 manual_curation mRNA 22235977 22238817 . + . ID=GSCOCT00027414001;Parent=GSCOCG00027414001;Name=Cc01_g05870 | |
| 7012 chr1 manual_curation polypeptide 22235977 22238523 . + . ID=GSCOCP00027414001;Dbxref=InterPro:IPR001173,PFAM:PF00535,SwissProt:Q9LJP4,SwissProt:Q9SB75,SwissProt:Q9SJA2,TAIR:AT2G24630.1,TAIR:AT3G28180.1,TAIR:AT4G31590.1,TrEMBL:B9RUD8,TrEMBL:F4YF68,TrEMBL:F6HV20;Derives_from=GSCOCT00027414001;Name=Cc01_g05870;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.4.1.12,PRODUCT:Xyloglucan glycosyltransferase 4,CC_functional_completeness:complete,CC_gene:CSLC4,CC_gene:CSLC8,CC_gene:CSLC5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027414001~ Xyloglucan glycosyltransferase 4~ CSLC4~ complete;original_location=join(2122598..2123245%2C2123499..2123525%2C2123611..2123919%2C2123997..2124401%2C2124503..2125144);owner=coffea | |
| 7013 chr1 manual_curation exon 22235977 22236624 . + . Parent=GSCOCT00027414001 | |
| 7014 chr1 manual_curation exon 22236878 22236904 . + . Parent=GSCOCT00027414001 | |
| 7015 chr1 manual_curation exon 22236990 22237298 . + . Parent=GSCOCT00027414001 | |
| 7016 chr1 manual_curation exon 22237376 22237780 . + . Parent=GSCOCT00027414001 | |
| 7017 chr1 manual_curation exon 22237882 22238817 . + . Parent=GSCOCT00027414001 | |
| 7018 chr1 manual_curation CDS 22235977 22236624 . + 0 Parent=GSCOCT00027414001 | |
| 7019 chr1 manual_curation CDS 22236878 22236904 . + 0 Parent=GSCOCT00027414001 | |
| 7020 chr1 manual_curation CDS 22236990 22237298 . + 0 Parent=GSCOCT00027414001 | |
| 7021 chr1 manual_curation CDS 22237376 22237780 . + 0 Parent=GSCOCT00027414001 | |
| 7022 chr1 manual_curation CDS 22237882 22238523 . + 0 Parent=GSCOCT00027414001 | |
| 7023 chr1 manual_curation gene 22240361 22248848 . - . ID=GSCOCG00027415001;Name=Cc01_g05880 | |
| 7024 chr1 manual_curation mRNA 22240361 22248848 . - . ID=GSCOCT00027415001;Parent=GSCOCG00027415001;Name=Cc01_g05880 | |
| 7025 chr1 manual_curation polypeptide 22240646 22248848 . - . ID=GSCOCP00027415001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR002225,InterPro:IPR016040,PFAM:PF01073,SwissProt:O80934,SwissProt:Q8H0U5,SwissProt:Q8H124,TAIR:AT2G34460.1,TAIR:AT2G37660.1,TAIR:AT4G31530.2,TrEMBL:B9GIF6,TrEMBL:D7T131,TrEMBL:I1JMB3;Derives_from=GSCOCT00027415001;Name=Cc01_g05880;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0003854,GO:0005488,GO:0006694,GO:0008152,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized protein At2g37660%2C chloroplastic,CC_functional_completeness:modules,CC_gene:At2g37660,CC_gene:At2g34460,CC_gene:TIC62;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027415001~ Putative Uncharacterized protein At2g37660%2C chloroplastic~ At2g37660~ modules;original_location=complement(join(2135154..2135469%2C2133215..2133327%2C2133046..2133099%2C2132848..2132932%2C2132186..2132291%2C2130136..2130222%2C2129925..2130022%2C2128805..2128914%2C2127267..2127350));owner=coffea | |
| 7026 chr1 manual_curation exon 22240361 22240729 . - . Parent=GSCOCT00027415001 | |
| 7027 chr1 manual_curation exon 22242184 22242293 . - . Parent=GSCOCT00027415001 | |
| 7028 chr1 manual_curation exon 22243304 22243401 . - . Parent=GSCOCT00027415001 | |
| 7029 chr1 manual_curation exon 22243515 22243601 . - . Parent=GSCOCT00027415001 | |
| 7030 chr1 manual_curation exon 22245565 22245670 . - . Parent=GSCOCT00027415001 | |
| 7031 chr1 manual_curation exon 22246227 22246311 . - . Parent=GSCOCT00027415001 | |
| 7032 chr1 manual_curation exon 22246425 22246478 . - . Parent=GSCOCT00027415001 | |
| 7033 chr1 manual_curation exon 22246594 22246706 . - . Parent=GSCOCT00027415001 | |
| 7034 chr1 manual_curation exon 22248533 22248848 . - . Parent=GSCOCT00027415001 | |
| 7035 chr1 manual_curation CDS 22240646 22240729 . - 0 Parent=GSCOCT00027415001 | |
| 7036 chr1 manual_curation CDS 22242184 22242293 . - 1 Parent=GSCOCT00027415001 | |
| 7037 chr1 manual_curation CDS 22243304 22243401 . - 2 Parent=GSCOCT00027415001 | |
| 7038 chr1 manual_curation CDS 22243515 22243601 . - 2 Parent=GSCOCT00027415001 | |
| 7039 chr1 manual_curation CDS 22245565 22245670 . - 1 Parent=GSCOCT00027415001 | |
| 7040 chr1 manual_curation CDS 22246227 22246311 . - 0 Parent=GSCOCT00027415001 | |
| 7041 chr1 manual_curation CDS 22246425 22246478 . - 0 Parent=GSCOCT00027415001 | |
| 7042 chr1 manual_curation CDS 22246594 22246706 . - 1 Parent=GSCOCT00027415001 | |
| 7043 chr1 manual_curation CDS 22248533 22248848 . - 0 Parent=GSCOCT00027415001 | |
| 7044 chr1 manual_curation gene 22282681 22291591 . + . ID=GSCOCG00027416001;Name=Cc01_g05890 | |
| 7045 chr1 manual_curation mRNA 22282681 22291591 . + . ID=GSCOCT00027416001;Parent=GSCOCG00027416001;Name=Cc01_g05890 | |
| 7046 chr1 manual_curation polypeptide 22282800 22291591 . + . ID=GSCOCP00027416001;Dbxref=HAMAP:MF_01876,InterPro:IPR007342,InterPro:IPR022830,PANTHER:PTHR10584:SF1,PFAM:PF04227,SUPERFAMILY:SSF110581,SwissProt:A7GCK7,SwissProt:A9BJN0,SwissProt:C0ZIY1,TAIR:AT1G50510.1,TrEMBL:D7KGP6,TrEMBL:D7T1C1,TrEMBL:Q84K35;Derives_from=GSCOCT00027416001;Name=Cc01_g05890;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pseudouridine-5'-phosphate glycosidase,CC_functional_completeness:complete,CC_gene:psuG;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027416001~ Pseudouridine-5'-phosphate glycosidase~ psuG~ complete;original_location=join(2169421..2169483%2C2169666..2169777%2C2170606..2170716%2C2172139..2172221%2C2174266..2174325%2C2174437..2174497%2C2175825..2175931%2C2176017..2176094%2C2177669..2177714%2C2177822..2177942%2C2178089..2178212);owner=coffea | |
| 7047 chr1 manual_curation exon 22282681 22282862 . + . Parent=GSCOCT00027416001 | |
| 7048 chr1 manual_curation exon 22283045 22283156 . + . Parent=GSCOCT00027416001 | |
| 7049 chr1 manual_curation exon 22283985 22284095 . + . Parent=GSCOCT00027416001 | |
| 7050 chr1 manual_curation exon 22285518 22285600 . + . Parent=GSCOCT00027416001 | |
| 7051 chr1 manual_curation exon 22287645 22287704 . + . Parent=GSCOCT00027416001 | |
| 7052 chr1 manual_curation exon 22287816 22287876 . + . Parent=GSCOCT00027416001 | |
| 7053 chr1 manual_curation exon 22289204 22289310 . + . Parent=GSCOCT00027416001 | |
| 7054 chr1 manual_curation exon 22289396 22289473 . + . Parent=GSCOCT00027416001 | |
| 7055 chr1 manual_curation exon 22291048 22291093 . + . Parent=GSCOCT00027416001 | |
| 7056 chr1 manual_curation exon 22291201 22291321 . + . Parent=GSCOCT00027416001 | |
| 7057 chr1 manual_curation exon 22291468 22291591 . + . Parent=GSCOCT00027416001 | |
| 7058 chr1 manual_curation CDS 22282800 22282862 . + 0 Parent=GSCOCT00027416001 | |
| 7059 chr1 manual_curation CDS 22283045 22283156 . + 0 Parent=GSCOCT00027416001 | |
| 7060 chr1 manual_curation CDS 22283985 22284095 . + 1 Parent=GSCOCT00027416001 | |
| 7061 chr1 manual_curation CDS 22285518 22285600 . + 1 Parent=GSCOCT00027416001 | |
| 7062 chr1 manual_curation CDS 22287645 22287704 . + 0 Parent=GSCOCT00027416001 | |
| 7063 chr1 manual_curation CDS 22287816 22287876 . + 0 Parent=GSCOCT00027416001 | |
| 7064 chr1 manual_curation CDS 22289204 22289310 . + 1 Parent=GSCOCT00027416001 | |
| 7065 chr1 manual_curation CDS 22289396 22289473 . + 0 Parent=GSCOCT00027416001 | |
| 7066 chr1 manual_curation CDS 22291048 22291093 . + 0 Parent=GSCOCT00027416001 | |
| 7067 chr1 manual_curation CDS 22291201 22291321 . + 1 Parent=GSCOCT00027416001 | |
| 7068 chr1 manual_curation CDS 22291468 22291591 . + 2 Parent=GSCOCT00027416001 | |
| 7069 chr1 manual_curation gene 22302543 22304868 . + . ID=GSCOCG00027418001;Name=Cc01_g05900 | |
| 7070 chr1 manual_curation mRNA 22302543 22304868 . + . ID=GSCOCT00027418001;Parent=GSCOCG00027418001;Name=Cc01_g05900 | |
| 7071 chr1 manual_curation polypeptide 22303262 22304674 . + . ID=GSCOCP00027418001;Dbxref=InterPro:IPR005202,PFAM:PF03514,PROFILE:PS50985,SwissProt:Q8GVE1,SwissProt:Q9LPR8,SwissProt:Q9S7H5,TAIR:AT1G50420.1,TAIR:AT2G04890.1,TAIR:AT3G03450.1,TrEMBL:A5AQK0,TrEMBL:B9HP16,TrEMBL:F6HAD7;Derives_from=GSCOCT00027418001;Name=Cc01_g05900;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Scarecrow-like protein 3,CC_functional_completeness:complete,CC_gene:SCL3,CC_gene:SCL21,CC_gene:CIGR2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027418001~ Scarecrow-like protein 3~ SCL3~ complete;original_location=2189883..2191295;owner=coffea | |
| 7072 chr1 manual_curation exon 22302543 22304868 . + . Parent=GSCOCT00027418001 | |
| 7073 chr1 manual_curation CDS 22303262 22304674 . + 0 Parent=GSCOCT00027418001 | |
| 7074 chr1 manual_curation gene 22310739 22311519 . + . ID=GSCOCG00027419001;Name=Cc01_g05910 | |
| 7075 chr1 manual_curation mRNA 22310739 22311519 . + . ID=GSCOCT00027419001;Parent=GSCOCG00027419001;Name=Cc01_g05910 | |
| 7076 chr1 manual_curation polypeptide 22310739 22311519 . + . ID=GSCOCP00027419001;Dbxref=InterPro:IPR000368,PFAM:PF00862,SwissProt:P10691,SwissProt:P49037,SwissProt:P49039,TAIR:AT3G43190.1,TAIR:AT4G02280.1,TAIR:AT5G49190.1,TrEMBL:A7Y137,TrEMBL:O82693,TrEMBL:Q7Y078;Derives_from=GSCOCT00027419001;Name=Cc01_g05910;Ontology_term=CC_evidence_code:ISS,GO:0005985,CC_EC_number:2.4.1.13,PRODUCT:Putative sucrose synthase 2,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027419001~ Putative sucrose synthase 2~ unknown_gene~ fragment;original_location=join(2197360..2197467%2C2197529..2197566%2C2197659..2197854%2C2198084..2198140);owner=coffea | |
| 7077 chr1 manual_curation exon 22310739 22310846 . + . Parent=GSCOCT00027419001 | |
| 7078 chr1 manual_curation exon 22310908 22310945 . + . Parent=GSCOCT00027419001 | |
| 7079 chr1 manual_curation exon 22311038 22311233 . + . Parent=GSCOCT00027419001 | |
| 7080 chr1 manual_curation exon 22311463 22311519 . + . Parent=GSCOCT00027419001 | |
| 7081 chr1 manual_curation CDS 22310739 22310846 . + 0 Parent=GSCOCT00027419001 | |
| 7082 chr1 manual_curation CDS 22310908 22310945 . + 0 Parent=GSCOCT00027419001 | |
| 7083 chr1 manual_curation CDS 22311038 22311233 . + 2 Parent=GSCOCT00027419001 | |
| 7084 chr1 manual_curation CDS 22311463 22311519 . + 0 Parent=GSCOCT00027419001 | |
| 7085 chr1 manual_curation gene 22312767 22314880 . - . ID=GSCOCG00027420001;Name=Cc01_g05920 | |
| 7086 chr1 manual_curation mRNA 22312767 22314880 . - . ID=GSCOCT00027420001;Parent=GSCOCG00027420001;Name=Cc01_g05920 | |
| 7087 chr1 manual_curation polypeptide 22313045 22314753 . - . ID=GSCOCP00027420001;Dbxref=InterPro:IPR003854,PFAM:PF02704,SwissProt:P27057,SwissProt:P46690,SwissProt:Q6NMQ7,TAIR:AT1G74670.1,TAIR:AT3G10185.1,TAIR:AT5G15230.1,TrEMBL:A9XNT2,TrEMBL:A9XNT3,TrEMBL:F4YF97;Derives_from=GSCOCT00027420001;Name=Cc01_g05920;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein GAST1,CC_functional_completeness:complete,CC_gene:GAST1,CC_gene:GASA6,CC_gene:GASA4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027420001~ Protein GAST1~ GAST1~ complete;original_location=complement(join(2201309..2201374%2C2200796..2200852%2C2200553..2200589%2C2199666..2199847));owner=coffea | |
| 7088 chr1 manual_curation exon 22312767 22313226 . - . Parent=GSCOCT00027420001 | |
| 7089 chr1 manual_curation exon 22313932 22313968 . - . Parent=GSCOCT00027420001 | |
| 7090 chr1 manual_curation exon 22314175 22314231 . - . Parent=GSCOCT00027420001 | |
| 7091 chr1 manual_curation exon 22314688 22314880 . - . Parent=GSCOCT00027420001 | |
| 7092 chr1 manual_curation CDS 22313045 22313226 . - 1 Parent=GSCOCT00027420001 | |
| 7093 chr1 manual_curation CDS 22313932 22313968 . - 0 Parent=GSCOCT00027420001 | |
| 7094 chr1 manual_curation CDS 22314175 22314231 . - 0 Parent=GSCOCT00027420001 | |
| 7095 chr1 manual_curation CDS 22314688 22314753 . - 0 Parent=GSCOCT00027420001 | |
| 7096 chr1 manual_curation gene 22318987 22320805 . - . ID=GSCOCG00027421001;Name=Cc01_g05930 | |
| 7097 chr1 manual_curation mRNA 22318987 22320805 . - . ID=GSCOCT00027421001;Parent=GSCOCG00027421001;Name=Cc01_g05930 | |
| 7098 chr1 manual_curation polypeptide 22318987 22320805 . - . ID=GSCOCP00027421001;Dbxref=InterPro:IPR007109,PROFILE:PS50833,TAIR:AT4G01560.1,TrEMBL:C6TII9,TrEMBL:I1KHL6,TrEMBL:I1KHL7;Derives_from=GSCOCT00027421001;Name=Cc01_g05930;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Ribosomal RNA processing Brix domain protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027421001~ Ribosomal RNA processing Brix domain protein~ unknown_gene~ fragment;original_location=complement(join(2207292..2207426%2C2205608..2205700));owner=coffea | |
| 7099 chr1 manual_curation exon 22318987 22319079 . - . Parent=GSCOCT00027421001 | |
| 7100 chr1 manual_curation exon 22320671 22320805 . - . Parent=GSCOCT00027421001 | |
| 7101 chr1 manual_curation CDS 22318987 22319079 . - 0 Parent=GSCOCT00027421001 | |
| 7102 chr1 manual_curation CDS 22320671 22320805 . - 0 Parent=GSCOCT00027421001 | |
| 7103 chr1 manual_curation gene 22327553 22329604 . - . ID=GSCOCG00027422001;Name=Cc01_g05940 | |
| 7104 chr1 manual_curation mRNA 22327553 22329604 . - . ID=GSCOCT00027422001;Parent=GSCOCG00027422001;Name=Cc01_g05940 | |
| 7105 chr1 manual_curation polypeptide 22327553 22329604 . - . ID=GSCOCP00027422001;Dbxref=SwissProt:Q5R631,SwissProt:Q8AVP1,SwissProt:Q9H9Y2,TAIR:AT4G01560.1,TrEMBL:C6TII9,TrEMBL:I1KHL6,TrEMBL:I1MK96;Derives_from=GSCOCT00027422001;Name=Cc01_g05940;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Ribosome production factor 1,CC_functional_completeness:fragment,CC_gene:RPF1,CC_gene:rpf1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027422001~ Putative Ribosome production factor 1~ RPF1~ fragment;original_location=complement(join(2216202..2216225%2C2215811..2215992%2C2215615..2215684%2C2215391..2215493%2C2215191..2215249%2C2215061..2215093%2C2214523..2214602%2C2214319..2214328%2C2214174..2214242));owner=coffea | |
| 7106 chr1 manual_curation exon 22327553 22327621 . - . Parent=GSCOCT00027422001 | |
| 7107 chr1 manual_curation exon 22327698 22327707 . - . Parent=GSCOCT00027422001 | |
| 7108 chr1 manual_curation exon 22327902 22327981 . - . Parent=GSCOCT00027422001 | |
| 7109 chr1 manual_curation exon 22328440 22328472 . - . Parent=GSCOCT00027422001 | |
| 7110 chr1 manual_curation exon 22328570 22328628 . - . Parent=GSCOCT00027422001 | |
| 7111 chr1 manual_curation exon 22328770 22328872 . - . Parent=GSCOCT00027422001 | |
| 7112 chr1 manual_curation exon 22328994 22329063 . - . Parent=GSCOCT00027422001 | |
| 7113 chr1 manual_curation exon 22329190 22329371 . - . Parent=GSCOCT00027422001 | |
| 7114 chr1 manual_curation exon 22329581 22329604 . - . Parent=GSCOCT00027422001 | |
| 7115 chr1 manual_curation CDS 22327553 22327621 . - 0 Parent=GSCOCT00027422001 | |
| 7116 chr1 manual_curation CDS 22327698 22327707 . - 2 Parent=GSCOCT00027422001 | |
| 7117 chr1 manual_curation CDS 22327902 22327981 . - 0 Parent=GSCOCT00027422001 | |
| 7118 chr1 manual_curation CDS 22328440 22328472 . - 0 Parent=GSCOCT00027422001 | |
| 7119 chr1 manual_curation CDS 22328570 22328628 . - 1 Parent=GSCOCT00027422001 | |
| 7120 chr1 manual_curation CDS 22328770 22328872 . - 0 Parent=GSCOCT00027422001 | |
| 7121 chr1 manual_curation CDS 22328994 22329063 . - 2 Parent=GSCOCT00027422001 | |
| 7122 chr1 manual_curation CDS 22329190 22329371 . - 0 Parent=GSCOCT00027422001 | |
| 7123 chr1 manual_curation CDS 22329581 22329604 . - 0 Parent=GSCOCT00027422001 | |
| 7124 chr1 manual_curation gene 22374457 22375485 . - . ID=GSCOCG00027423001;Name=Cc01_g05950 | |
| 7125 chr1 manual_curation mRNA 22374457 22375485 . - . ID=GSCOCT00027423001;Parent=GSCOCG00027423001;Name=Cc01_g05950 | |
| 7126 chr1 manual_curation polypeptide 22374457 22375485 . - . ID=GSCOCP00027423001;Dbxref=InterPro:IPR007109,PFAM:PF04427,TAIR:AT4G01560.1,TrEMBL:B9GRT3,TrEMBL:B9I969,TrEMBL:Q2V9A2;Derives_from=GSCOCT00027423001;Name=Cc01_g05950;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027423001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(2262065..2262106%2C2261679..2261732%2C2261470..2261556%2C2261317..2261380%2C2261078..2261208));owner=coffea | |
| 7127 chr1 manual_curation exon 22374457 22374587 . - . Parent=GSCOCT00027423001 | |
| 7128 chr1 manual_curation exon 22374696 22374759 . - . Parent=GSCOCT00027423001 | |
| 7129 chr1 manual_curation exon 22374849 22374935 . - . Parent=GSCOCT00027423001 | |
| 7130 chr1 manual_curation exon 22375058 22375111 . - . Parent=GSCOCT00027423001 | |
| 7131 chr1 manual_curation exon 22375444 22375485 . - . Parent=GSCOCT00027423001 | |
| 7132 chr1 manual_curation CDS 22374457 22374587 . - 1 Parent=GSCOCT00027423001 | |
| 7133 chr1 manual_curation CDS 22374696 22374759 . - 0 Parent=GSCOCT00027423001 | |
| 7134 chr1 manual_curation CDS 22374849 22374935 . - 0 Parent=GSCOCT00027423001 | |
| 7135 chr1 manual_curation CDS 22375058 22375111 . - 0 Parent=GSCOCT00027423001 | |
| 7136 chr1 manual_curation CDS 22375444 22375485 . - 0 Parent=GSCOCT00027423001 | |
| 7137 chr1 manual_curation gene 22396102 22396338 . + . ID=GSCOCG00027424001;Name=Cc01_g05960 | |
| 7138 chr1 manual_curation mRNA 22396102 22396338 . + . ID=GSCOCT00027424001;Parent=GSCOCG00027424001;Name=Cc01_g05960 | |
| 7139 chr1 manual_curation polypeptide 22396102 22396338 . + . ID=GSCOCP00027424001;Dbxref=InterPro:IPR000719,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017442,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00108,SUPERFAMILY:SSF56112,SwissProt:Q7XUF4,TAIR:AT1G18040.1,TAIR:AT5G63370.1;Derives_from=GSCOCT00027424001;Name=Cc01_g05960;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.22,PRODUCT:Cyclin-dependent kinase G-2,CC_functional_completeness:fragment,CC_gene:CDKG-1,CC_gene:CDKG-2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027424001~ Cyclin-dependent kinase G-2~ CDKG-1~ fragment;original_location=2282723..2282959;owner=coffea | |
| 7140 chr1 manual_curation exon 22396102 22396338 . + . Parent=GSCOCT00027424001 | |
| 7141 chr1 manual_curation CDS 22396102 22396338 . + 0 Parent=GSCOCT00027424001 | |
| 7142 chr1 manual_curation gene 22496462 22498855 . + . ID=GSCOCG00027425001;Name=Cc01_g05970 | |
| 7143 chr1 manual_curation mRNA 22496462 22498855 . + . ID=GSCOCT00027425001;Parent=GSCOCG00027425001;Name=Cc01_g05970 | |
| 7144 chr1 manual_curation polypeptide 22497695 22498399 . + . ID=GSCOCP00027425001;Derives_from=GSCOCT00027425001;Name=Cc01_g05970;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027425001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=2384316..2385020;owner=coffea | |
| 7145 chr1 manual_curation exon 22496462 22498855 . + . Parent=GSCOCT00027425001 | |
| 7146 chr1 manual_curation CDS 22497695 22498399 . + 0 Parent=GSCOCT00027425001 | |
| 7147 chr1 manual_curation gene 22519131 22520760 . - . ID=GSCOCG00027429001;Name=Cc01_g05980 | |
| 7148 chr1 manual_curation mRNA 22519131 22520760 . - . ID=GSCOCT00027429001;Parent=GSCOCG00027429001;Name=Cc01_g05980 | |
| 7149 chr1 manual_curation polypeptide 22519131 22520760 . - . ID=GSCOCP00027429001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR011009,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:C0LGP2,SwissProt:O49564,SwissProt:Q8RWW0,TAIR:AT1G51940.1,TAIR:AT2G23770.1,TAIR:AT2G33580.1,TrEMBL:B9HEM3,TrEMBL:B9T4V9,TrEMBL:F6GX02;Derives_from=GSCOCT00027429001;Name=Cc01_g05980;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.10.2,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:CRK27,CC_gene:MEE39,CC_gene:ALE2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027429001~ Putative uncharacterized protein~ CRK27~ fragment;original_location=complement(join(2406869..2407381%2C2405752..2406357));owner=coffea | |
| 7150 chr1 manual_curation exon 22519131 22519736 . - . Parent=GSCOCT00027429001 | |
| 7151 chr1 manual_curation exon 22520248 22520760 . - . Parent=GSCOCT00027429001 | |
| 7152 chr1 manual_curation CDS 22519131 22519736 . - 0 Parent=GSCOCT00027429001 | |
| 7153 chr1 manual_curation CDS 22520248 22520760 . - 0 Parent=GSCOCT00027429001 | |
| 7154 chr1 manual_curation gene 22524879 22538494 . + . ID=GSCOCG00027430001;Name=Cc01_g05990 | |
| 7155 chr1 manual_curation mRNA 22524879 22538494 . + . ID=GSCOCT00027430001;Parent=GSCOCG00027430001;Name=Cc01_g05990 | |
| 7156 chr1 manual_curation polypeptide 22524879 22538174 . + . ID=GSCOCP00027430001;Dbxref=InterPro:IPR001965,InterPro:IPR004022,InterPro:IPR011011,InterPro:IPR018500,InterPro:IPR018501,InterPro:IPR019786,InterPro:IPR019787,PFAM:PF00628,PFAM:PF02791,PROFILE:PS50016,PROFILE:PS50827,PROSITE:PS01359,SMART:SM00249,SMART:SM00571,SUPERFAMILY:SSF57903,TAIR:AT5G12400.1,TAIR:AT5G22760.1,TAIR:AT5G35210.1,TrEMBL:B9RIG6,TrEMBL:F6HA06,TrEMBL:I1LPD8;Derives_from=GSCOCT00027430001;Name=Cc01_g05990;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative DNA binding%3Bzinc ion binding%3BDNA binding,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027430001~ Putative DNA binding%3Bzinc ion binding%3BDNA binding~ unknown_gene~ complete;original_location=join(2411500..2412962%2C2413067..2413678%2C2417120..2417574%2C2417632..2418242%2C2419232..2419520%2C2419607..2419731%2C2420023..2420480%2C2421968..2421996%2C2423102..2423695%2C2424134..2424795);owner=coffea | |
| 7157 chr1 manual_curation exon 22524879 22526341 . + . Parent=GSCOCT00027430001 | |
| 7158 chr1 manual_curation exon 22526446 22527057 . + . Parent=GSCOCT00027430001 | |
| 7159 chr1 manual_curation exon 22530499 22530953 . + . Parent=GSCOCT00027430001 | |
| 7160 chr1 manual_curation exon 22531011 22531621 . + . Parent=GSCOCT00027430001 | |
| 7161 chr1 manual_curation exon 22532611 22532899 . + . Parent=GSCOCT00027430001 | |
| 7162 chr1 manual_curation exon 22532986 22533110 . + . Parent=GSCOCT00027430001 | |
| 7163 chr1 manual_curation exon 22533402 22533859 . + . Parent=GSCOCT00027430001 | |
| 7164 chr1 manual_curation exon 22535347 22535375 . + . Parent=GSCOCT00027430001 | |
| 7165 chr1 manual_curation exon 22536481 22537074 . + . Parent=GSCOCT00027430001 | |
| 7166 chr1 manual_curation exon 22537513 22538494 . + . Parent=GSCOCT00027430001 | |
| 7167 chr1 manual_curation CDS 22524879 22526341 . + 0 Parent=GSCOCT00027430001 | |
| 7168 chr1 manual_curation CDS 22526446 22527057 . + 2 Parent=GSCOCT00027430001 | |
| 7169 chr1 manual_curation CDS 22530499 22530953 . + 2 Parent=GSCOCT00027430001 | |
| 7170 chr1 manual_curation CDS 22531011 22531621 . + 1 Parent=GSCOCT00027430001 | |
| 7171 chr1 manual_curation CDS 22532611 22532899 . + 0 Parent=GSCOCT00027430001 | |
| 7172 chr1 manual_curation CDS 22532986 22533110 . + 1 Parent=GSCOCT00027430001 | |
| 7173 chr1 manual_curation CDS 22533402 22533859 . + 0 Parent=GSCOCT00027430001 | |
| 7174 chr1 manual_curation CDS 22535347 22535375 . + 2 Parent=GSCOCT00027430001 | |
| 7175 chr1 manual_curation CDS 22536481 22537074 . + 1 Parent=GSCOCT00027430001 | |
| 7176 chr1 manual_curation CDS 22537513 22538174 . + 1 Parent=GSCOCT00027430001 | |
| 7177 chr1 manual_curation gene 22541281 22552031 . - . ID=GSCOCG00027432001;Name=Cc01_g06000 | |
| 7178 chr1 manual_curation mRNA 22541281 22552031 . - . ID=GSCOCT00027432001;Parent=GSCOCG00027432001;Name=Cc01_g06000 | |
| 7179 chr1 manual_curation polypeptide 22542213 22551929 . - . ID=GSCOCP00027432001;Dbxref=InterPro:IPR000523,InterPro:IPR002035,InterPro:IPR003593,InterPro:IPR011776,PFAM:PF00092,PFAM:PF01078,PROFILE:PS50234,SMART:SM00327,SMART:SM00382,SwissProt:O22437,SwissProt:O24133,SwissProt:Q9SJE1,TAIR:AT1G08520.1,TAIR:AT4G18480.1,TAIR:AT5G45930.1,TIGRFAMs:TIGR02031,TrEMBL:B9HP09,TrEMBL:B9RIG5,TrEMBL:C5WW04;Derives_from=GSCOCT00027432001;Name=Cc01_g06000;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0015979,GO:0015995,GO:0016851,GO:0017111,CC_EC_number:6.6.1.1,CC_EC_number:6.6.1.1,PRODUCT:Magnesium-chelatase subunit chlD%2C chloroplastic,CC_functional_completeness:complete,CC_gene:CHLD;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027432001~ Magnesium-chelatase subunit chlD%2C chloroplastic~ CHLD~ complete;original_location=complement(join(2438254..2438550%2C2437203..2437381%2C2435474..2435558%2C2435034..2435350%2C2434667..2434790%2C2434422..2434514%2C2432739..2432834%2C2431795..2431929%2C2431469..2431669%2C2431136..2431291%2C2430733..2430840%2C2429919..2430053%2C2429462..2429620%2C2428999..2429119%2C2428834..2428919));owner=coffea | |
| 7180 chr1 manual_curation exon 22541281 22542298 . - . Parent=GSCOCT00027432001 | |
| 7181 chr1 manual_curation exon 22542378 22542498 . - . Parent=GSCOCT00027432001 | |
| 7182 chr1 manual_curation exon 22542841 22542999 . - . Parent=GSCOCT00027432001 | |
| 7183 chr1 manual_curation exon 22543298 22543432 . - . Parent=GSCOCT00027432001 | |
| 7184 chr1 manual_curation exon 22544112 22544219 . - . Parent=GSCOCT00027432001 | |
| 7185 chr1 manual_curation exon 22544515 22544670 . - . Parent=GSCOCT00027432001 | |
| 7186 chr1 manual_curation exon 22544848 22545048 . - . Parent=GSCOCT00027432001 | |
| 7187 chr1 manual_curation exon 22545174 22545308 . - . Parent=GSCOCT00027432001 | |
| 7188 chr1 manual_curation exon 22546118 22546213 . - . Parent=GSCOCT00027432001 | |
| 7189 chr1 manual_curation exon 22547801 22547893 . - . Parent=GSCOCT00027432001 | |
| 7190 chr1 manual_curation exon 22548046 22548169 . - . Parent=GSCOCT00027432001 | |
| 7191 chr1 manual_curation exon 22548413 22548729 . - . Parent=GSCOCT00027432001 | |
| 7192 chr1 manual_curation exon 22548853 22548937 . - . Parent=GSCOCT00027432001 | |
| 7193 chr1 manual_curation exon 22550582 22550760 . - . Parent=GSCOCT00027432001 | |
| 7194 chr1 manual_curation exon 22551633 22552031 . - . Parent=GSCOCT00027432001 | |
| 7195 chr1 manual_curation CDS 22542213 22542298 . - 1 Parent=GSCOCT00027432001 | |
| 7196 chr1 manual_curation CDS 22542378 22542498 . - 0 Parent=GSCOCT00027432001 | |
| 7197 chr1 manual_curation CDS 22542841 22542999 . - 0 Parent=GSCOCT00027432001 | |
| 7198 chr1 manual_curation CDS 22543298 22543432 . - 0 Parent=GSCOCT00027432001 | |
| 7199 chr1 manual_curation CDS 22544112 22544219 . - 0 Parent=GSCOCT00027432001 | |
| 7200 chr1 manual_curation CDS 22544515 22544670 . - 0 Parent=GSCOCT00027432001 | |
| 7201 chr1 manual_curation CDS 22544848 22545048 . - 0 Parent=GSCOCT00027432001 | |
| 7202 chr1 manual_curation CDS 22545174 22545308 . - 0 Parent=GSCOCT00027432001 | |
| 7203 chr1 manual_curation CDS 22546118 22546213 . - 0 Parent=GSCOCT00027432001 | |
| 7204 chr1 manual_curation CDS 22547801 22547893 . - 0 Parent=GSCOCT00027432001 | |
| 7205 chr1 manual_curation CDS 22548046 22548169 . - 2 Parent=GSCOCT00027432001 | |
| 7206 chr1 manual_curation CDS 22548413 22548729 . - 0 Parent=GSCOCT00027432001 | |
| 7207 chr1 manual_curation CDS 22548853 22548937 . - 2 Parent=GSCOCT00027432001 | |
| 7208 chr1 manual_curation CDS 22550582 22550760 . - 0 Parent=GSCOCT00027432001 | |
| 7209 chr1 manual_curation CDS 22551633 22551929 . - 0 Parent=GSCOCT00027432001 | |
| 7210 chr1 manual_curation gene 22552740 22557029 . + . ID=GSCOCG00027433001;Name=Cc01_g06010 | |
| 7211 chr1 manual_curation mRNA 22552740 22557029 . + . ID=GSCOCT00027433001;Parent=GSCOCG00027433001;Name=Cc01_g06010 | |
| 7212 chr1 manual_curation polypeptide 22552740 22556584 . + . ID=GSCOCP00027433001;Dbxref=GENE3D:G3DSA:1.25.40.20,InterPro:IPR002110,InterPro:IPR020683,PFAM:PF00023,PROFILE:PS50088,PROFILE:PS50297,SMART:SM00248,SUPERFAMILY:SSF48403,SwissProt:Q05753,SwissProt:Q9SQK3,SwissProt:Q9Z2X3,TAIR:AT2G14255.1,TAIR:AT5G40160.1,TAIR:AT5G66055.1,TrEMBL:B9DF91,TrEMBL:B9SXC5,TrEMBL:F6HAH9;Derives_from=GSCOCT00027433001;Name=Cc01_g06010;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Ankyrin repeat domain-containing protein%2C chloroplastic,CC_functional_completeness:complete,CC_gene:AKRP,CC_gene:EMB506,CC_gene:Psmd10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027433001~ Ankyrin repeat domain-containing protein%2C chloroplastic~ AKRP~ complete;original_location=join(2439361..2440126%2C2441070..2441146%2C2441450..2441548%2C2441674..2441772%2C2442317..2442415%2C2442503..2442601%2C2443101..2443205);owner=coffea | |
| 7213 chr1 manual_curation exon 22552740 22553505 . + . Parent=GSCOCT00027433001 | |
| 7214 chr1 manual_curation exon 22554449 22554525 . + . Parent=GSCOCT00027433001 | |
| 7215 chr1 manual_curation exon 22554829 22554927 . + . Parent=GSCOCT00027433001 | |
| 7216 chr1 manual_curation exon 22555053 22555151 . + . Parent=GSCOCT00027433001 | |
| 7217 chr1 manual_curation exon 22555696 22555794 . + . Parent=GSCOCT00027433001 | |
| 7218 chr1 manual_curation exon 22555882 22555980 . + . Parent=GSCOCT00027433001 | |
| 7219 chr1 manual_curation exon 22556480 22557029 . + . Parent=GSCOCT00027433001 | |
| 7220 chr1 manual_curation CDS 22552740 22553505 . + 0 Parent=GSCOCT00027433001 | |
| 7221 chr1 manual_curation CDS 22554449 22554525 . + 1 Parent=GSCOCT00027433001 | |
| 7222 chr1 manual_curation CDS 22554829 22554927 . + 0 Parent=GSCOCT00027433001 | |
| 7223 chr1 manual_curation CDS 22555053 22555151 . + 0 Parent=GSCOCT00027433001 | |
| 7224 chr1 manual_curation CDS 22555696 22555794 . + 0 Parent=GSCOCT00027433001 | |
| 7225 chr1 manual_curation CDS 22555882 22555980 . + 0 Parent=GSCOCT00027433001 | |
| 7226 chr1 manual_curation CDS 22556480 22556584 . + 0 Parent=GSCOCT00027433001 | |
| 7227 chr1 manual_curation gene 22559947 22566366 . + . ID=GSCOCG00027434001;Name=Cc01_g06020 | |
| 7228 chr1 manual_curation mRNA 22559947 22566366 . + . ID=GSCOCT00027434001;Parent=GSCOCG00027434001;Name=Cc01_g06020 | |
| 7229 chr1 manual_curation polypeptide 22559947 22566366 . + . ID=GSCOCP00027434001;Dbxref=InterPro:IPR001563,InterPro:IPR018202,PANTHER:PTHR11802,PFAM:PF00450,PRINTS:PR00724,PROSITE:PS00131,SwissProt:P52711,SwissProt:Q0WRX3,SwissProt:Q8L9Y0,TAIR:AT3G02110.1,TAIR:AT3G07990.1,TAIR:AT3G63470.1,TrEMBL:A5BH43,TrEMBL:F6H1D7,TrEMBL:F6HQE1;Derives_from=GSCOCT00027434001;Name=Cc01_g06020;Ontology_term=CC_evidence_code:ISS,GO:0004185,GO:0006508,CC_EC_number:3.4.16.6,PRODUCT:Serine carboxypeptidase II-3,CC_functional_completeness:modules,CC_gene:CXP%3B2-3,CC_gene:SCPL40,CC_gene:SCPL25;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027434001~ Serine carboxypeptidase II-3~ CXP%3B2-3~ modules;original_location=join(2446568..2446937%2C2447030..2447137%2C2447230..2447501%2C2447601..2447840%2C2447953..2448071%2C2448224..2448319%2C2448428..2448533%2C2452204..2452416%2C2452560..2452624%2C2452735..2452821%2C2452954..2452987);owner=coffea | |
| 7230 chr1 manual_curation exon 22559947 22560316 . + . Parent=GSCOCT00027434001 | |
| 7231 chr1 manual_curation exon 22560409 22560516 . + . Parent=GSCOCT00027434001 | |
| 7232 chr1 manual_curation exon 22560609 22560880 . + . Parent=GSCOCT00027434001 | |
| 7233 chr1 manual_curation exon 22560980 22561219 . + . Parent=GSCOCT00027434001 | |
| 7234 chr1 manual_curation exon 22561332 22561450 . + . Parent=GSCOCT00027434001 | |
| 7235 chr1 manual_curation exon 22561603 22561698 . + . Parent=GSCOCT00027434001 | |
| 7236 chr1 manual_curation exon 22561807 22561912 . + . Parent=GSCOCT00027434001 | |
| 7237 chr1 manual_curation exon 22565583 22565795 . + . Parent=GSCOCT00027434001 | |
| 7238 chr1 manual_curation exon 22565939 22566003 . + . Parent=GSCOCT00027434001 | |
| 7239 chr1 manual_curation exon 22566114 22566200 . + . Parent=GSCOCT00027434001 | |
| 7240 chr1 manual_curation exon 22566333 22566366 . + . Parent=GSCOCT00027434001 | |
| 7241 chr1 manual_curation CDS 22559947 22560316 . + 0 Parent=GSCOCT00027434001 | |
| 7242 chr1 manual_curation CDS 22560409 22560516 . + 1 Parent=GSCOCT00027434001 | |
| 7243 chr1 manual_curation CDS 22560609 22560880 . + 1 Parent=GSCOCT00027434001 | |
| 7244 chr1 manual_curation CDS 22560980 22561219 . + 0 Parent=GSCOCT00027434001 | |
| 7245 chr1 manual_curation CDS 22561332 22561450 . + 0 Parent=GSCOCT00027434001 | |
| 7246 chr1 manual_curation CDS 22561603 22561698 . + 2 Parent=GSCOCT00027434001 | |
| 7247 chr1 manual_curation CDS 22561807 22561912 . + 2 Parent=GSCOCT00027434001 | |
| 7248 chr1 manual_curation CDS 22565583 22565795 . + 0 Parent=GSCOCT00027434001 | |
| 7249 chr1 manual_curation CDS 22565939 22566003 . + 0 Parent=GSCOCT00027434001 | |
| 7250 chr1 manual_curation CDS 22566114 22566200 . + 2 Parent=GSCOCT00027434001 | |
| 7251 chr1 manual_curation CDS 22566333 22566366 . + 2 Parent=GSCOCT00027434001 | |
| 7252 chr1 manual_curation gene 22582969 22586722 . + . ID=GSCOCG00027435001;Name=Cc01_g06030 | |
| 7253 chr1 manual_curation mRNA 22582969 22586722 . + . ID=GSCOCT00027435001;Parent=GSCOCG00027435001;Name=Cc01_g06030 | |
| 7254 chr1 manual_curation polypeptide 22582969 22586722 . + . ID=GSCOCP00027435001;Dbxref=InterPro:IPR001563,InterPro:IPR018202,PANTHER:PTHR11802,PFAM:PF00450,PRINTS:PR00724,PROSITE:PS00560,SwissProt:P52711,SwissProt:Q0WRX3,SwissProt:Q8L9Y0,TAIR:AT2G35780.1,TAIR:AT3G02110.1,TAIR:AT3G63470.1,TrEMBL:A5BH43,TrEMBL:F6H1D7,TrEMBL:F6HQE1;Derives_from=GSCOCT00027435001;Name=Cc01_g06030;Ontology_term=CC_evidence_code:ISS,GO:0004185,GO:0006508,CC_EC_number:3.4.16.6,PRODUCT:Putative Serine carboxypeptidase II-3,CC_functional_completeness:complete,CC_gene:CXP%3B2-3,CC_gene:SCPL40,CC_gene:SCPL25;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027435001~ Putative Serine carboxypeptidase II-3~ CXP%3B2-3~ complete;original_location=join(2469590..2469681%2C2469956..2470013%2C2471333..2471498%2C2471584..2471662%2C2471738..2472083%2C2472246..2472398%2C2472521..2472634%2C2472800..2472839%2C2472887..2472923%2C2472963..2473068%2C2473200..2473343);owner=coffea | |
| 7255 chr1 manual_curation exon 22582969 22583060 . + . Parent=GSCOCT00027435001 | |
| 7256 chr1 manual_curation exon 22583335 22583392 . + . Parent=GSCOCT00027435001 | |
| 7257 chr1 manual_curation exon 22584712 22584877 . + . Parent=GSCOCT00027435001 | |
| 7258 chr1 manual_curation exon 22584963 22585041 . + . Parent=GSCOCT00027435001 | |
| 7259 chr1 manual_curation exon 22585117 22585462 . + . Parent=GSCOCT00027435001 | |
| 7260 chr1 manual_curation exon 22585625 22585777 . + . Parent=GSCOCT00027435001 | |
| 7261 chr1 manual_curation exon 22585900 22586013 . + . Parent=GSCOCT00027435001 | |
| 7262 chr1 manual_curation exon 22586179 22586218 . + . Parent=GSCOCT00027435001 | |
| 7263 chr1 manual_curation exon 22586266 22586302 . + . Parent=GSCOCT00027435001 | |
| 7264 chr1 manual_curation exon 22586342 22586447 . + . Parent=GSCOCT00027435001 | |
| 7265 chr1 manual_curation exon 22586579 22586722 . + . Parent=GSCOCT00027435001 | |
| 7266 chr1 manual_curation CDS 22582969 22583060 . + 0 Parent=GSCOCT00027435001 | |
| 7267 chr1 manual_curation CDS 22583335 22583392 . + 2 Parent=GSCOCT00027435001 | |
| 7268 chr1 manual_curation CDS 22584712 22584877 . + 0 Parent=GSCOCT00027435001 | |
| 7269 chr1 manual_curation CDS 22584963 22585041 . + 1 Parent=GSCOCT00027435001 | |
| 7270 chr1 manual_curation CDS 22585117 22585462 . + 2 Parent=GSCOCT00027435001 | |
| 7271 chr1 manual_curation CDS 22585625 22585777 . + 0 Parent=GSCOCT00027435001 | |
| 7272 chr1 manual_curation CDS 22585900 22586013 . + 0 Parent=GSCOCT00027435001 | |
| 7273 chr1 manual_curation CDS 22586179 22586218 . + 0 Parent=GSCOCT00027435001 | |
| 7274 chr1 manual_curation CDS 22586266 22586302 . + 1 Parent=GSCOCT00027435001 | |
| 7275 chr1 manual_curation CDS 22586342 22586447 . + 2 Parent=GSCOCT00027435001 | |
| 7276 chr1 manual_curation CDS 22586579 22586722 . + 0 Parent=GSCOCT00027435001 | |
| 7277 chr1 manual_curation gene 22606416 22607234 . + . ID=GSCOCG00027436001;Name=Cc01_g06040 | |
| 7278 chr1 manual_curation mRNA 22606416 22607234 . + . ID=GSCOCT00027436001;Parent=GSCOCG00027436001;Name=Cc01_g06040 | |
| 7279 chr1 manual_curation polypeptide 22606416 22607234 . + . ID=GSCOCP00027436001;Dbxref=InterPro:IPR001563,PANTHER:PTHR11802,PFAM:PF00450,SwissProt:P52711,SwissProt:Q0WRX3,SwissProt:Q9ZQQ0,TAIR:AT2G35770.1,TAIR:AT2G35780.1,TAIR:AT3G63470.1,TrEMBL:A5BH43,TrEMBL:F6H1D7,TrEMBL:F6HQE1;Derives_from=GSCOCT00027436001;Name=Cc01_g06040;Ontology_term=CC_evidence_code:ISS,GO:0004185,GO:0006508,CC_EC_number:3.4.16.6,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:CXP%3B2-3,CC_gene:SCPL40,CC_gene:SCPL26;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027436001~ Putative uncharacterized protein~ CXP%3B2-3~ fragment;original_location=join(2493037..2493403%2C2493728..2493855);owner=coffea | |
| 7280 chr1 manual_curation exon 22606416 22606782 . + . Parent=GSCOCT00027436001 | |
| 7281 chr1 manual_curation exon 22607107 22607234 . + . Parent=GSCOCT00027436001 | |
| 7282 chr1 manual_curation CDS 22606416 22606782 . + 0 Parent=GSCOCT00027436001 | |
| 7283 chr1 manual_curation CDS 22607107 22607234 . + 1 Parent=GSCOCT00027436001 | |
| 7284 chr1 manual_curation gene 22665556 22667281 . + . ID=GSCOCG00027439001;Name=Cc01_g06050 | |
| 7285 chr1 manual_curation mRNA 22665556 22667281 . + . ID=GSCOCT00027439001;Parent=GSCOCG00027439001;Name=Cc01_g06050 | |
| 7286 chr1 manual_curation polypeptide 22665556 22667281 . + . ID=GSCOCP00027439001;Dbxref=InterPro:IPR001563,InterPro:IPR018202,PANTHER:PTHR11802,PFAM:PF00450,PRINTS:PR00724,PROSITE:PS00560,SwissProt:P52711,SwissProt:Q0WRX3,SwissProt:Q8L9Y0,TAIR:AT2G24010.1,TAIR:AT3G02110.1,TAIR:AT3G63470.1,TrEMBL:A5BH43,TrEMBL:F6H1D7,TrEMBL:F6HQE1;Derives_from=GSCOCT00027439001;Name=Cc01_g06050;Ontology_term=CC_evidence_code:ISS,GO:0004185,GO:0006508,CC_EC_number:3.4.16.6,PRODUCT:Putative Serine carboxypeptidase-like 40,CC_functional_completeness:fragment,CC_gene:SCPL40,CC_gene:CXP%3B2-3,CC_gene:SCPL25;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027439001~ Putative Serine carboxypeptidase-like 40~ SCPL40~ fragment;original_location=join(2552177..2552252%2C2552343..2552614%2C2552714..2552930%2C2553076..2553211%2C2553325..2553420%2C2553519..2553624%2C2553759..2553902);owner=coffea | |
| 7287 chr1 manual_curation exon 22665556 22665631 . + . Parent=GSCOCT00027439001 | |
| 7288 chr1 manual_curation exon 22665722 22665993 . + . Parent=GSCOCT00027439001 | |
| 7289 chr1 manual_curation exon 22666093 22666309 . + . Parent=GSCOCT00027439001 | |
| 7290 chr1 manual_curation exon 22666455 22666590 . + . Parent=GSCOCT00027439001 | |
| 7291 chr1 manual_curation exon 22666704 22666799 . + . Parent=GSCOCT00027439001 | |
| 7292 chr1 manual_curation exon 22666898 22667003 . + . Parent=GSCOCT00027439001 | |
| 7293 chr1 manual_curation exon 22667138 22667281 . + . Parent=GSCOCT00027439001 | |
| 7294 chr1 manual_curation CDS 22665556 22665631 . + 0 Parent=GSCOCT00027439001 | |
| 7295 chr1 manual_curation CDS 22665722 22665993 . + 1 Parent=GSCOCT00027439001 | |
| 7296 chr1 manual_curation CDS 22666093 22666309 . + 0 Parent=GSCOCT00027439001 | |
| 7297 chr1 manual_curation CDS 22666455 22666590 . + 1 Parent=GSCOCT00027439001 | |
| 7298 chr1 manual_curation CDS 22666704 22666799 . + 2 Parent=GSCOCT00027439001 | |
| 7299 chr1 manual_curation CDS 22666898 22667003 . + 2 Parent=GSCOCT00027439001 | |
| 7300 chr1 manual_curation CDS 22667138 22667281 . + 0 Parent=GSCOCT00027439001 | |
| 7301 chr1 manual_curation gene 22683743 22685883 . + . ID=GSCOCG00027440001;Name=Cc01_g06060 | |
| 7302 chr1 manual_curation mRNA 22683743 22685883 . + . ID=GSCOCT00027440001;Parent=GSCOCG00027440001;Name=Cc01_g06060 | |
| 7303 chr1 manual_curation polypeptide 22683743 22685883 . + . ID=GSCOCP00027440001;Dbxref=InterPro:IPR001563,PANTHER:PTHR11802,PFAM:PF00450,PRINTS:PR00724,SwissProt:P52711,SwissProt:Q0WRX3,SwissProt:Q8L9Y0,TAIR:AT2G35780.1,TAIR:AT3G02110.1,TAIR:AT3G63470.1,TrEMBL:A5BH43,TrEMBL:F6H1D7,TrEMBL:F6HQE1;Derives_from=GSCOCT00027440001;Name=Cc01_g06060;Ontology_term=CC_evidence_code:ISS,GO:0004185,GO:0006508,CC_EC_number:3.4.16.6,PRODUCT:Putative Serine carboxypeptidase-like 40,CC_functional_completeness:fragment,CC_gene:SCPL40,CC_gene:CXP%3B2-3,CC_gene:SCPL25;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027440001~ Putative Serine carboxypeptidase-like 40~ SCPL40~ fragment;original_location=join(2570364..2570730%2C2571057..2571533%2C2571724..2571842%2C2571946..2572064%2C2572168..2572263%2C2572378..2572504);owner=coffea | |
| 7304 chr1 manual_curation exon 22683743 22684109 . + . Parent=GSCOCT00027440001 | |
| 7305 chr1 manual_curation exon 22684436 22684912 . + . Parent=GSCOCT00027440001 | |
| 7306 chr1 manual_curation exon 22685103 22685221 . + . Parent=GSCOCT00027440001 | |
| 7307 chr1 manual_curation exon 22685325 22685443 . + . Parent=GSCOCT00027440001 | |
| 7308 chr1 manual_curation exon 22685547 22685642 . + . Parent=GSCOCT00027440001 | |
| 7309 chr1 manual_curation exon 22685757 22685883 . + . Parent=GSCOCT00027440001 | |
| 7310 chr1 manual_curation CDS 22683743 22684109 . + 0 Parent=GSCOCT00027440001 | |
| 7311 chr1 manual_curation CDS 22684436 22684912 . + 1 Parent=GSCOCT00027440001 | |
| 7312 chr1 manual_curation CDS 22685103 22685221 . + 1 Parent=GSCOCT00027440001 | |
| 7313 chr1 manual_curation CDS 22685325 22685443 . + 0 Parent=GSCOCT00027440001 | |
| 7314 chr1 manual_curation CDS 22685547 22685642 . + 2 Parent=GSCOCT00027440001 | |
| 7315 chr1 manual_curation CDS 22685757 22685883 . + 2 Parent=GSCOCT00027440001 | |
| 7316 chr1 manual_curation gene 22721686 22724087 . + . ID=GSCOCG00027441001;Name=Cc01_g06070 | |
| 7317 chr1 manual_curation mRNA 22721686 22724087 . + . ID=GSCOCT00027441001;Parent=GSCOCG00027441001;Name=Cc01_g06070 | |
| 7318 chr1 manual_curation polypeptide 22721686 22724087 . + . ID=GSCOCP00027441001;Dbxref=InterPro:IPR001563,InterPro:IPR018202,PANTHER:PTHR11802,PFAM:PF00450,PRINTS:PR00724,PROSITE:PS00131,PROSITE:PS00560,SwissProt:P52711,SwissProt:Q0WRX3,SwissProt:Q8L9Y0,TAIR:AT3G02110.1,TAIR:AT3G63470.1,TAIR:AT4G30610.1,TrEMBL:A5BH43,TrEMBL:F6H1D7,TrEMBL:F6HQE1;Derives_from=GSCOCT00027441001;Name=Cc01_g06070;Ontology_term=CC_evidence_code:ISS,GO:0004185,GO:0006508,CC_EC_number:3.4.16.6,PRODUCT:Serine carboxypeptidase-like 40,CC_functional_completeness:complete,CC_gene:SCPL40,CC_gene:CXP%3B2-3,CC_gene:SCPL25;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027441001~ Serine carboxypeptidase-like 40~ SCPL40~ complete;original_location=join(2608307..2608673%2C2608998..2609105%2C2609199..2609470%2C2609558..2609800%2C2609904..2610022%2C2610126..2610221%2C2610337..2610442%2C2610565..2610708);owner=coffea | |
| 7319 chr1 manual_curation exon 22721686 22722052 . + . Parent=GSCOCT00027441001 | |
| 7320 chr1 manual_curation exon 22722377 22722484 . + . Parent=GSCOCT00027441001 | |
| 7321 chr1 manual_curation exon 22722578 22722849 . + . Parent=GSCOCT00027441001 | |
| 7322 chr1 manual_curation exon 22722937 22723179 . + . Parent=GSCOCT00027441001 | |
| 7323 chr1 manual_curation exon 22723283 22723401 . + . Parent=GSCOCT00027441001 | |
| 7324 chr1 manual_curation exon 22723505 22723600 . + . Parent=GSCOCT00027441001 | |
| 7325 chr1 manual_curation exon 22723716 22723821 . + . Parent=GSCOCT00027441001 | |
| 7326 chr1 manual_curation exon 22723944 22724087 . + . Parent=GSCOCT00027441001 | |
| 7327 chr1 manual_curation CDS 22721686 22722052 . + 0 Parent=GSCOCT00027441001 | |
| 7328 chr1 manual_curation CDS 22722377 22722484 . + 1 Parent=GSCOCT00027441001 | |
| 7329 chr1 manual_curation CDS 22722578 22722849 . + 1 Parent=GSCOCT00027441001 | |
| 7330 chr1 manual_curation CDS 22722937 22723179 . + 0 Parent=GSCOCT00027441001 | |
| 7331 chr1 manual_curation CDS 22723283 22723401 . + 0 Parent=GSCOCT00027441001 | |
| 7332 chr1 manual_curation CDS 22723505 22723600 . + 2 Parent=GSCOCT00027441001 | |
| 7333 chr1 manual_curation CDS 22723716 22723821 . + 2 Parent=GSCOCT00027441001 | |
| 7334 chr1 manual_curation CDS 22723944 22724087 . + 0 Parent=GSCOCT00027441001 | |
| 7335 chr1 manual_curation gene 22726253 22730878 . - . ID=GSCOCG00027442001;Name=Cc01_g06080 | |
| 7336 chr1 manual_curation mRNA 22726253 22730878 . - . ID=GSCOCT00027442001;Parent=GSCOCG00027442001;Name=Cc01_g06080 | |
| 7337 chr1 manual_curation polypeptide 22726544 22729831 . - . ID=GSCOCP00027442001;Dbxref=TAIR:AT1G80245.1,TAIR:AT4G00695.3,TrEMBL:D7TVM0,TrEMBL:Q56YF7,TrEMBL:Q8LFC7;Derives_from=GSCOCT00027442001;Name=Cc01_g06080;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Spc97 / Spc98 family of spindle pole body (SBP) component,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027442001~ Putative Spc97 / Spc98 family of spindle pole body (SBP) component~ unknown_gene~ modules;original_location=complement(join(2616351..2616452%2C2616137..2616239%2C2614792..2615014%2C2613305..2613364%2C2613165..2613171));owner=coffea | |
| 7338 chr1 manual_curation exon 22730259 22730391 . - . Parent=GSCOCT00027442001 | |
| 7339 chr1 manual_curation exon 22730821 22730878 . - . Parent=GSCOCT00027442001 | |
| 7340 chr1 manual_curation exon 22726253 22726550 . - . Parent=GSCOCT00027442001 | |
| 7341 chr1 manual_curation exon 22726684 22726743 . - . Parent=GSCOCT00027442001 | |
| 7342 chr1 manual_curation exon 22728171 22728393 . - . Parent=GSCOCT00027442001 | |
| 7343 chr1 manual_curation exon 22729516 22729618 . - . Parent=GSCOCT00027442001 | |
| 7344 chr1 manual_curation exon 22729730 22729866 . - . Parent=GSCOCT00027442001 | |
| 7345 chr1 manual_curation CDS 22726544 22726550 . - 2 Parent=GSCOCT00027442001 | |
| 7346 chr1 manual_curation CDS 22726684 22726743 . - 2 Parent=GSCOCT00027442001 | |
| 7347 chr1 manual_curation CDS 22728171 22728393 . - 1 Parent=GSCOCT00027442001 | |
| 7348 chr1 manual_curation CDS 22729516 22729618 . - 0 Parent=GSCOCT00027442001 | |
| 7349 chr1 manual_curation CDS 22729730 22729831 . - 0 Parent=GSCOCT00027442001 | |
| 7350 chr1 manual_curation gene 22734887 22741494 . + . ID=GSCOCG00027443001;Name=Cc01_g06090 | |
| 7351 chr1 manual_curation mRNA 22734887 22741494 . + . ID=GSCOCT00027443001;Parent=GSCOCG00027443001;Name=Cc01_g06090 | |
| 7352 chr1 manual_curation polypeptide 22736548 22739731 . + . ID=GSCOCP00027443001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008266,InterPro:IPR011009,InterPro:IPR017442,InterPro:IPR022495,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00109,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q54W07,SwissProt:Q96S44,SwissProt:Q99PW4,TAIR:AT1G08120.1,TAIR:AT5G26110.1,TIGRFAMs:TIGR03724,TrEMBL:B9GSK7,TrEMBL:B9H8B4,TrEMBL:F6HI61;Derives_from=GSCOCT00027443001;Name=Cc01_g06090;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0004713,GO:0005524,GO:0006468,CC_EC_number:missing_EC_number,CC_EC_number:missing_EC_number,PRODUCT:Putative TP53-regulating kinase,CC_functional_completeness:complete,CC_gene:TP53RK,CC_gene:bud32,CC_gene:Tp53rk;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027443001~ Putative TP53-regulating kinase~ TP53RK~ complete;original_location=join(2623169..2623231%2C2624668..2624781%2C2624866..2625144%2C2625290..2625403%2C2626118..2626190%2C2626315..2626352);owner=coffea | |
| 7353 chr1 manual_curation exon 22734887 22735014 . + . Parent=GSCOCT00027443001 | |
| 7354 chr1 manual_curation exon 22740950 22741494 . + . Parent=GSCOCT00027443001 | |
| 7355 chr1 manual_curation exon 22736510 22736610 . + . Parent=GSCOCT00027443001 | |
| 7356 chr1 manual_curation exon 22738047 22738160 . + . Parent=GSCOCT00027443001 | |
| 7357 chr1 manual_curation exon 22738245 22738523 . + . Parent=GSCOCT00027443001 | |
| 7358 chr1 manual_curation exon 22738669 22738782 . + . Parent=GSCOCT00027443001 | |
| 7359 chr1 manual_curation exon 22739497 22739569 . + . Parent=GSCOCT00027443001 | |
| 7360 chr1 manual_curation exon 22739694 22739759 . + . Parent=GSCOCT00027443001 | |
| 7361 chr1 manual_curation CDS 22736548 22736610 . + 0 Parent=GSCOCT00027443001 | |
| 7362 chr1 manual_curation CDS 22738047 22738160 . + 0 Parent=GSCOCT00027443001 | |
| 7363 chr1 manual_curation CDS 22738245 22738523 . + 0 Parent=GSCOCT00027443001 | |
| 7364 chr1 manual_curation CDS 22738669 22738782 . + 0 Parent=GSCOCT00027443001 | |
| 7365 chr1 manual_curation CDS 22739497 22739569 . + 0 Parent=GSCOCT00027443001 | |
| 7366 chr1 manual_curation CDS 22739694 22739731 . + 1 Parent=GSCOCT00027443001 | |
| 7367 chr1 manual_curation gene 22746118 22753713 . + . ID=GSCOCG00027444001;Name=Cc01_g06100 | |
| 7368 chr1 manual_curation mRNA 22746118 22753713 . + . ID=GSCOCT00027444001;Parent=GSCOCG00027444001;Name=Cc01_g06100 | |
| 7369 chr1 manual_curation polypeptide 22746226 22753401 . + . ID=GSCOCP00027444001;Dbxref=InterPro:IPR004114,PFAM:PF02926,PROFILE:PS51165,SwissProt:Q24K03,SwissProt:Q99J36,SwissProt:Q9VZD8,TAIR:AT5G12410.1,TrEMBL:B9GI37,TrEMBL:B9HP06,TrEMBL:D7SNG3;Derives_from=GSCOCT00027444001;Name=Cc01_g06100;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:THUMP domain-containing protein,CC_functional_completeness:complete,CC_gene:THUMPD1,CC_gene:Thumpd1,CC_gene:CG15014;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027444001~ THUMP domain-containing protein~ THUMPD1~ complete;original_location=join(2632847..2632903%2C2633007..2633123%2C2636444..2636914%2C2638666..2638805%2C2638917..2639037%2C2639484..2639624%2C2639939..2640022);owner=coffea | |
| 7370 chr1 manual_curation exon 22746118 22746282 . + . Parent=GSCOCT00027444001 | |
| 7371 chr1 manual_curation exon 22746386 22746502 . + . Parent=GSCOCT00027444001 | |
| 7372 chr1 manual_curation exon 22749823 22750293 . + . Parent=GSCOCT00027444001 | |
| 7373 chr1 manual_curation exon 22752045 22752184 . + . Parent=GSCOCT00027444001 | |
| 7374 chr1 manual_curation exon 22752296 22752416 . + . Parent=GSCOCT00027444001 | |
| 7375 chr1 manual_curation exon 22752863 22753003 . + . Parent=GSCOCT00027444001 | |
| 7376 chr1 manual_curation exon 22753318 22753713 . + . Parent=GSCOCT00027444001 | |
| 7377 chr1 manual_curation CDS 22746226 22746282 . + 0 Parent=GSCOCT00027444001 | |
| 7378 chr1 manual_curation CDS 22746386 22746502 . + 0 Parent=GSCOCT00027444001 | |
| 7379 chr1 manual_curation CDS 22749823 22750293 . + 0 Parent=GSCOCT00027444001 | |
| 7380 chr1 manual_curation CDS 22752045 22752184 . + 0 Parent=GSCOCT00027444001 | |
| 7381 chr1 manual_curation CDS 22752296 22752416 . + 2 Parent=GSCOCT00027444001 | |
| 7382 chr1 manual_curation CDS 22752863 22753003 . + 0 Parent=GSCOCT00027444001 | |
| 7383 chr1 manual_curation CDS 22753318 22753401 . + 0 Parent=GSCOCT00027444001 | |
| 7384 chr1 manual_curation gene 22754313 22756115 . - . ID=GSCOCG00027445001;Name=Cc01_g06110 | |
| 7385 chr1 manual_curation mRNA 22754313 22756115 . - . ID=GSCOCT00027445001;Parent=GSCOCG00027445001;Name=Cc01_g06110 | |
| 7386 chr1 manual_curation polypeptide 22754479 22755995 . - . ID=GSCOCP00027445001;Dbxref=GENE3D:G3DSA:3.10.110.10,InterPro:IPR000608,InterPro:IPR015582,InterPro:IPR016135,PANTHER:PTHR11621:SF26,PFAM:PF00179,PROFILE:PS50127,PROSITE:PS00183,SMART:SM00212,SUPERFAMILY:SSF54495,SwissProt:Q54XS6,SwissProt:Q8L7T3,SwissProt:Q9LJZ5,TAIR:AT1G14400.1,TAIR:AT1G50490.1,TAIR:AT3G20060.1,TrEMBL:A5BHQ5,TrEMBL:A9PAG1,TrEMBL:A9PD53;Derives_from=GSCOCT00027445001;Name=Cc01_g06110;Ontology_term=CC_evidence_code:ISS,GO:0004842,GO:0005524,GO:0016567,GO:0019787,GO:0043687,GO:0051246,CC_EC_number:6.3.2.19,PRODUCT:Ubiquitin-conjugating enzyme E2 19,CC_functional_completeness:complete,CC_gene:UBC19,CC_gene:UBC20,CC_gene:ube2c;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027445001~ Ubiquitin-conjugating enzyme E2 19~ UBC19~ complete;original_location=complement(join(2642489..2642616%2C2641932..2641959%2C2641582..2641809%2C2641424..2641487%2C2641251..2641310%2C2641100..2641143));owner=coffea | |
| 7387 chr1 manual_curation exon 22754313 22754522 . - . Parent=GSCOCT00027445001 | |
| 7388 chr1 manual_curation exon 22754630 22754689 . - . Parent=GSCOCT00027445001 | |
| 7389 chr1 manual_curation exon 22754803 22754866 . - . Parent=GSCOCT00027445001 | |
| 7390 chr1 manual_curation exon 22754961 22755188 . - . Parent=GSCOCT00027445001 | |
| 7391 chr1 manual_curation exon 22755311 22755338 . - . Parent=GSCOCT00027445001 | |
| 7392 chr1 manual_curation exon 22755868 22756115 . - . Parent=GSCOCT00027445001 | |
| 7393 chr1 manual_curation CDS 22754479 22754522 . - 1 Parent=GSCOCT00027445001 | |
| 7394 chr1 manual_curation CDS 22754630 22754689 . - 1 Parent=GSCOCT00027445001 | |
| 7395 chr1 manual_curation CDS 22754803 22754866 . - 0 Parent=GSCOCT00027445001 | |
| 7396 chr1 manual_curation CDS 22754961 22755188 . - 0 Parent=GSCOCT00027445001 | |
| 7397 chr1 manual_curation CDS 22755311 22755338 . - 2 Parent=GSCOCT00027445001 | |
| 7398 chr1 manual_curation CDS 22755868 22755995 . - 0 Parent=GSCOCT00027445001 | |
| 7399 chr1 manual_curation gene 22776384 22777558 . - . ID=GSCOCG00027448001;Name=Cc01_g06120 | |
| 7400 chr1 manual_curation mRNA 22776384 22777558 . - . ID=GSCOCT00027448001;Parent=GSCOCG00027448001;Name=Cc01_g06120 | |
| 7401 chr1 manual_curation polypeptide 22776384 22776886 . - . ID=GSCOCP00027448001;Dbxref=GENE3D:G3DSA:3.40.640.10,InterPro:IPR004839,InterPro:IPR015421,InterPro:IPR015424,PFAM:PF00155,SUPERFAMILY:SSF53383,SwissProt:Q67Y55,SwissProt:Q9FN30,SwissProt:Q9SK47,TAIR:AT2G24850.1,TAIR:AT4G28420.2,TAIR:AT5G53970.1,TrEMBL:E2JFA7,TrEMBL:G7LDS3,TrEMBL:Q4JR87;Derives_from=GSCOCT00027448001;Name=Cc01_g06120;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0009058,GO:0030170,CC_EC_number:2.6.1.1,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:At5g53970,CC_gene:TAT3,CC_gene:At4g28420;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027448001~ Hypothetical protein~ At5g53970~ missing_functional_completeness;original_location=complement(join(2663280..2663507%2C2663005..2663187));owner=coffea | |
| 7402 chr1 manual_curation exon 22776384 22776566 . - . Parent=GSCOCT00027448001 | |
| 7403 chr1 manual_curation exon 22776659 22777558 . - . Parent=GSCOCT00027448001 | |
| 7404 chr1 manual_curation CDS 22776384 22776566 . - 0 Parent=GSCOCT00027448001 | |
| 7405 chr1 manual_curation CDS 22776659 22776886 . - 0 Parent=GSCOCT00027448001 | |
| 7406 chr1 manual_curation gene 22778443 22780999 . - . ID=GSCOCG00027449001;Name=Cc01_g06130 | |
| 7407 chr1 manual_curation mRNA 22778443 22780999 . - . ID=GSCOCT00027449001;Parent=GSCOCG00027449001;Name=Cc01_g06130 | |
| 7408 chr1 manual_curation polypeptide 22778443 22780999 . - . ID=GSCOCP00027449001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SMART:SM00369,SwissProt:C0LGQ5,SwissProt:Q9FIZ3,SwissProt:Q9FL28,TAIR:AT2G34930.1,TAIR:AT4G20140.1,TAIR:AT5G46330.1,TrEMBL:F6HAI0,TrEMBL:I1MPQ7,TrEMBL:I1MPW9;Derives_from=GSCOCT00027449001;Name=Cc01_g06130;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:3.1.3.16,PRODUCT:Putative LRR receptor-like serine/threonine-protein kinase FLS2,CC_functional_completeness:complete,CC_gene:FLS2,CC_gene:GSO1,CC_gene:GSO2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027449001~ Putative LRR receptor-like serine/threonine-protein kinase FLS2~ FLS2~ complete;original_location=complement(join(2667372..2667620%2C2667224..2667317%2C2665568..2667157%2C2665400..2665458%2C2665064..2665354));owner=coffea | |
| 7409 chr1 manual_curation exon 22778443 22778733 . - . Parent=GSCOCT00027449001 | |
| 7410 chr1 manual_curation exon 22778779 22778837 . - . Parent=GSCOCT00027449001 | |
| 7411 chr1 manual_curation exon 22778947 22780536 . - . Parent=GSCOCT00027449001 | |
| 7412 chr1 manual_curation exon 22780603 22780696 . - . Parent=GSCOCT00027449001 | |
| 7413 chr1 manual_curation exon 22780751 22780999 . - . Parent=GSCOCT00027449001 | |
| 7414 chr1 manual_curation CDS 22778443 22778733 . - 0 Parent=GSCOCT00027449001 | |
| 7415 chr1 manual_curation CDS 22778779 22778837 . - 1 Parent=GSCOCT00027449001 | |
| 7416 chr1 manual_curation CDS 22778947 22780536 . - 1 Parent=GSCOCT00027449001 | |
| 7417 chr1 manual_curation CDS 22780603 22780696 . - 0 Parent=GSCOCT00027449001 | |
| 7418 chr1 manual_curation CDS 22780751 22780999 . - 0 Parent=GSCOCT00027449001 | |
| 7419 chr1 manual_curation gene 22805361 22811266 . - . ID=GSCOCG00027452001;Name=Cc01_g06140 | |
| 7420 chr1 manual_curation mRNA 22805361 22811266 . - . ID=GSCOCT00027452001;Parent=GSCOCG00027452001;Name=Cc01_g06140 | |
| 7421 chr1 manual_curation polypeptide 22805361 22811266 . - . ID=GSCOCP00027452001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SMART:SM00369,SwissProt:C0LGQ5,SwissProt:Q9FL28,SwissProt:Q9LVP0,TAIR:AT2G34930.1,TAIR:AT4G20140.1,TAIR:AT5G46330.1,TrEMBL:I1MPQ3,TrEMBL:I1MPQ7,TrEMBL:Q5ZBC0;Derives_from=GSCOCT00027452001;Name=Cc01_g06140;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative LRR receptor-like serine/threonine-protein kinase GSO1,CC_functional_completeness:complete,CC_gene:GSO1,CC_gene:FLS2,CC_gene:At5g63930;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027452001~ Putative LRR receptor-like serine/threonine-protein kinase GSO1~ GSO1~ complete;original_location=complement(join(2696787..2697887%2C2695583..2695618%2C2695369..2695446%2C2694259..2694412%2C2693677..2693696%2C2692503..2693369%2C2691982..2692263));owner=coffea | |
| 7422 chr1 manual_curation exon 22805361 22805642 . - . Parent=GSCOCT00027452001 | |
| 7423 chr1 manual_curation exon 22805882 22806748 . - . Parent=GSCOCT00027452001 | |
| 7424 chr1 manual_curation exon 22807056 22807075 . - . Parent=GSCOCT00027452001 | |
| 7425 chr1 manual_curation exon 22807638 22807791 . - . Parent=GSCOCT00027452001 | |
| 7426 chr1 manual_curation exon 22808748 22808825 . - . Parent=GSCOCT00027452001 | |
| 7427 chr1 manual_curation exon 22808962 22808997 . - . Parent=GSCOCT00027452001 | |
| 7428 chr1 manual_curation exon 22810166 22811266 . - . Parent=GSCOCT00027452001 | |
| 7429 chr1 manual_curation CDS 22805361 22805642 . - 0 Parent=GSCOCT00027452001 | |
| 7430 chr1 manual_curation CDS 22805882 22806748 . - 0 Parent=GSCOCT00027452001 | |
| 7431 chr1 manual_curation CDS 22807056 22807075 . - 1 Parent=GSCOCT00027452001 | |
| 7432 chr1 manual_curation CDS 22807638 22807791 . - 0 Parent=GSCOCT00027452001 | |
| 7433 chr1 manual_curation CDS 22808748 22808825 . - 0 Parent=GSCOCT00027452001 | |
| 7434 chr1 manual_curation CDS 22808962 22808997 . - 0 Parent=GSCOCT00027452001 | |
| 7435 chr1 manual_curation CDS 22810166 22811266 . - 0 Parent=GSCOCT00027452001 | |
| 7436 chr1 manual_curation gene 22856549 22858930 . + . ID=GSCOCG00027453001;Name=Cc01_g06150 | |
| 7437 chr1 manual_curation mRNA 22856549 22858930 . + . ID=GSCOCT00027453001;Parent=GSCOCG00027453001;Name=Cc01_g06150 | |
| 7438 chr1 manual_curation polypeptide 22856549 22858930 . + . ID=GSCOCP00027453001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SMART:SM00369,SwissProt:C0LGQ5,SwissProt:C0LGT6,SwissProt:Q9SHI2,TAIR:AT1G73066.1,TAIR:AT2G34930.1,TAIR:AT4G20140.1,TrEMBL:B7SWI8,TrEMBL:B9R9B1,TrEMBL:G5CBV1;Derives_from=GSCOCT00027453001;Name=Cc01_g06150;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:3.1.3.16,PRODUCT:Putative LRR receptor-like serine/threonine-protein kinase GSO1,CC_functional_completeness:complete,CC_gene:GSO1,CC_gene:EFR,CC_gene:At1g17230;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027453001~ Putative LRR receptor-like serine/threonine-protein kinase GSO1~ GSO1~ complete;original_location=join(2743170..2743391%2C2743449..2743777%2C2743874..2744823%2C2744944..2745123%2C2745334..2745551);owner=coffea | |
| 7439 chr1 manual_curation exon 22856549 22856770 . + . Parent=GSCOCT00027453001 | |
| 7440 chr1 manual_curation exon 22856828 22857156 . + . Parent=GSCOCT00027453001 | |
| 7441 chr1 manual_curation exon 22857253 22858202 . + . Parent=GSCOCT00027453001 | |
| 7442 chr1 manual_curation exon 22858323 22858502 . + . Parent=GSCOCT00027453001 | |
| 7443 chr1 manual_curation exon 22858713 22858930 . + . Parent=GSCOCT00027453001 | |
| 7444 chr1 manual_curation CDS 22856549 22856770 . + 0 Parent=GSCOCT00027453001 | |
| 7445 chr1 manual_curation CDS 22856828 22857156 . + 0 Parent=GSCOCT00027453001 | |
| 7446 chr1 manual_curation CDS 22857253 22858202 . + 2 Parent=GSCOCT00027453001 | |
| 7447 chr1 manual_curation CDS 22858323 22858502 . + 1 Parent=GSCOCT00027453001 | |
| 7448 chr1 manual_curation CDS 22858713 22858930 . + 1 Parent=GSCOCT00027453001 | |
| 7449 chr1 manual_curation gene 22859907 22861323 . + . ID=GSCOCG00027454001;Name=Cc01_g06160 | |
| 7450 chr1 manual_curation mRNA 22859907 22861323 . + . ID=GSCOCT00027454001;Parent=GSCOCG00027454001;Name=Cc01_g06160 | |
| 7451 chr1 manual_curation polypeptide 22860150 22861323 . + . ID=GSCOCP00027454001;Dbxref=GENE3D:G3DSA:3.10.110.10,InterPro:IPR000608,InterPro:IPR015582,InterPro:IPR016135,PANTHER:PTHR11621:SF26,PFAM:PF00179,PROFILE:PS50127,PROSITE:PS00183,SMART:SM00212,SUPERFAMILY:SSF54495,SwissProt:P56616,SwissProt:Q8L7T3,SwissProt:Q9LJZ5,TAIR:AT1G50490.1,TAIR:AT2G02760.1,TAIR:AT3G20060.1,TrEMBL:A5BHQ5,TrEMBL:A9PAG1,TrEMBL:E5GBT5;Derives_from=GSCOCT00027454001;Name=Cc01_g06160;Ontology_term=CC_evidence_code:ISS,GO:0004842,GO:0005524,GO:0016567,GO:0019787,GO:0043687,GO:0051246,CC_EC_number:6.3.2.19,PRODUCT:Ubiquitin-conjugating enzyme E2 19,CC_functional_completeness:fragment,CC_gene:UBC19,CC_gene:UBC20,CC_gene:ube2c;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027454001~ Ubiquitin-conjugating enzyme E2 19~ UBC19~ fragment;original_location=join(2746771..2746898%2C2747159..2747191%2C2747292..2747304%2C2747388..2747414%2C2747537..2747764%2C2747861..2747944);owner=coffea | |
| 7452 chr1 manual_curation exon 22859907 22860277 . + . Parent=GSCOCT00027454001 | |
| 7453 chr1 manual_curation exon 22860538 22860570 . + . Parent=GSCOCT00027454001 | |
| 7454 chr1 manual_curation exon 22860671 22860683 . + . Parent=GSCOCT00027454001 | |
| 7455 chr1 manual_curation exon 22860767 22860793 . + . Parent=GSCOCT00027454001 | |
| 7456 chr1 manual_curation exon 22860916 22861143 . + . Parent=GSCOCT00027454001 | |
| 7457 chr1 manual_curation exon 22861240 22861323 . + . Parent=GSCOCT00027454001 | |
| 7458 chr1 manual_curation CDS 22860150 22860277 . + 0 Parent=GSCOCT00027454001 | |
| 7459 chr1 manual_curation CDS 22860538 22860570 . + 2 Parent=GSCOCT00027454001 | |
| 7460 chr1 manual_curation CDS 22860671 22860683 . + 2 Parent=GSCOCT00027454001 | |
| 7461 chr1 manual_curation CDS 22860767 22860793 . + 0 Parent=GSCOCT00027454001 | |
| 7462 chr1 manual_curation CDS 22860916 22861143 . + 0 Parent=GSCOCT00027454001 | |
| 7463 chr1 manual_curation CDS 22861240 22861323 . + 0 Parent=GSCOCT00027454001 | |
| 7464 chr1 manual_curation gene 22876281 22877380 . + . ID=GSCOCG00027455001;Name=Cc01_g06170 | |
| 7465 chr1 manual_curation mRNA 22876281 22877380 . + . ID=GSCOCT00027455001;Parent=GSCOCG00027455001;Name=Cc01_g06170 | |
| 7466 chr1 manual_curation polypeptide 22876281 22877380 . + . ID=GSCOCP00027455001;Dbxref=InterPro:IPR004114,PFAM:PF02926,PROFILE:PS51165,SwissProt:Q24K03,SwissProt:Q99J36,TAIR:AT5G12410.1,TrEMBL:C6TM85,TrEMBL:D7SNG3,TrEMBL:I1LG64;Derives_from=GSCOCT00027455001;Name=Cc01_g06170;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative THUMP domain-containing protein 1,CC_functional_completeness:fragment,CC_gene:THUMPD1,CC_gene:Thumpd1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027455001~ Putative THUMP domain-containing protein 1~ THUMPD1~ fragment;original_location=join(2762902..2763018%2C2763464..2763604%2C2763918..2764001);owner=coffea | |
| 7467 chr1 manual_curation exon 22876281 22876397 . + . Parent=GSCOCT00027455001 | |
| 7468 chr1 manual_curation exon 22876843 22876983 . + . Parent=GSCOCT00027455001 | |
| 7469 chr1 manual_curation exon 22877297 22877380 . + . Parent=GSCOCT00027455001 | |
| 7470 chr1 manual_curation CDS 22876281 22876397 . + 0 Parent=GSCOCT00027455001 | |
| 7471 chr1 manual_curation CDS 22876843 22876983 . + 0 Parent=GSCOCT00027455001 | |
| 7472 chr1 manual_curation CDS 22877297 22877380 . + 0 Parent=GSCOCT00027455001 | |
| 7473 chr1 manual_curation gene 22878532 22880310 . - . ID=GSCOCG00027456001;Name=Cc01_g06180 | |
| 7474 chr1 manual_curation mRNA 22878532 22880310 . - . ID=GSCOCT00027456001;Parent=GSCOCG00027456001;Name=Cc01_g06180 | |
| 7475 chr1 manual_curation polypeptide 22878614 22880148 . - . ID=GSCOCP00027456001;Dbxref=GENE3D:G3DSA:3.10.110.10,InterPro:IPR000608,InterPro:IPR015582,InterPro:IPR016135,PANTHER:PTHR11621:SF26,PFAM:PF00179,PROFILE:PS50127,PROSITE:PS00183,SMART:SM00212,SUPERFAMILY:SSF54495,SwissProt:Q54XS6,SwissProt:Q8L7T3,SwissProt:Q9LJZ5,TAIR:AT1G50490.1,TAIR:AT2G02760.1,TAIR:AT3G20060.1,TrEMBL:A5BHQ5,TrEMBL:A9PAG1,TrEMBL:D7LAV9;Derives_from=GSCOCT00027456001;Name=Cc01_g06180;Ontology_term=CC_evidence_code:ISS,GO:0004842,GO:0005524,GO:0016567,GO:0019787,GO:0043687,GO:0051246,CC_EC_number:6.3.2.19,PRODUCT:Ubiquitin-conjugating enzyme E2 19,CC_functional_completeness:complete,CC_gene:UBC19,CC_gene:UBC20,CC_gene:ube2c;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027456001~ Ubiquitin-conjugating enzyme E2 19~ UBC19~ complete;original_location=complement(join(2766642..2766769%2C2766069..2766096%2C2765719..2765946%2C2765559..2765622%2C2765387..2765446%2C2765235..2765278));owner=coffea | |
| 7476 chr1 manual_curation exon 22878532 22878657 . - . Parent=GSCOCT00027456001 | |
| 7477 chr1 manual_curation exon 22878766 22878825 . - . Parent=GSCOCT00027456001 | |
| 7478 chr1 manual_curation exon 22878938 22879001 . - . Parent=GSCOCT00027456001 | |
| 7479 chr1 manual_curation exon 22879098 22879325 . - . Parent=GSCOCT00027456001 | |
| 7480 chr1 manual_curation exon 22879448 22879475 . - . Parent=GSCOCT00027456001 | |
| 7481 chr1 manual_curation exon 22880021 22880310 . - . Parent=GSCOCT00027456001 | |
| 7482 chr1 manual_curation CDS 22878614 22878657 . - 1 Parent=GSCOCT00027456001 | |
| 7483 chr1 manual_curation CDS 22878766 22878825 . - 1 Parent=GSCOCT00027456001 | |
| 7484 chr1 manual_curation CDS 22878938 22879001 . - 0 Parent=GSCOCT00027456001 | |
| 7485 chr1 manual_curation CDS 22879098 22879325 . - 0 Parent=GSCOCT00027456001 | |
| 7486 chr1 manual_curation CDS 22879448 22879475 . - 2 Parent=GSCOCT00027456001 | |
| 7487 chr1 manual_curation CDS 22880021 22880148 . - 0 Parent=GSCOCT00027456001 | |
| 7488 chr1 manual_curation gene 22881606 22882204 . + . ID=GSCOCG00027457001;Name=Cc01_g06190 | |
| 7489 chr1 manual_curation mRNA 22881606 22882204 . + . ID=GSCOCT00027457001;Parent=GSCOCG00027457001;Name=Cc01_g06190 | |
| 7490 chr1 manual_curation polypeptide 22881606 22882204 . + . ID=GSCOCP00027457001;Dbxref=InterPro:IPR001611,PFAM:PF00560,TAIR:AT1G34210.1,TAIR:AT4G30520.1,TrEMBL:B9RG89,TrEMBL:B9RG90,TrEMBL:I1MPS2;Derives_from=GSCOCT00027457001;Name=Cc01_g06190;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00027457001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(2768227..2768336%2C2768531..2768825);owner=coffea | |
| 7491 chr1 manual_curation exon 22881606 22881715 . + . Parent=GSCOCT00027457001 | |
| 7492 chr1 manual_curation exon 22881910 22882204 . + . Parent=GSCOCT00027457001 | |
| 7493 chr1 manual_curation CDS 22881606 22881715 . + 0 Parent=GSCOCT00027457001 | |
| 7494 chr1 manual_curation CDS 22881910 22882204 . + 2 Parent=GSCOCT00027457001 | |
| 7495 chr1 manual_curation gene 23019731 23025802 . - . ID=GSCOCG00029978001;Name=Cc01_g06200 | |
| 7496 chr1 manual_curation mRNA 23019731 23025802 . - . ID=GSCOCT00029978001;Parent=GSCOCG00029978001;Name=Cc01_g06200 | |
| 7497 chr1 manual_curation polypeptide 23019772 23025802 . - . ID=GSCOCP00029978001;Dbxref=InterPro:IPR001312,InterPro:IPR019807,InterPro:IPR022672,InterPro:IPR022673,PANTHER:PTHR19443,PFAM:PF00349,PFAM:PF03727,PRINTS:PR00475,PROSITE:PS00378,SwissProt:Q2KNB4,SwissProt:Q56XE8,SwissProt:Q9LPS1,TAIR:AT1G50460.1,TAIR:AT3G20040.1,TAIR:AT4G29130.1,TrEMBL:B9GI36,TrEMBL:I1JAF6,TrEMBL:I1LG62;Derives_from=GSCOCT00029978001;Name=Cc01_g06200;Ontology_term=CC_evidence_code:ISS,GO:0004396,GO:0005524,GO:0005975,GO:0006096,CC_EC_number:2.7.1.1,PRODUCT:Hexokinase-3,CC_functional_completeness:complete,CC_gene:At1g50460,CC_gene:HXK3,CC_gene:At3g20040;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00029978001~ Hexokinase-3~ At1g50460~ complete;original_location=complement(join(132862..133142%2C131512..131659%2C131201..131383%2C130718..130792%2C129323..129478%2C128966..129064%2C128721..128848%2C127577..127658%2C127112..127489));owner=coffea | |
| 7498 chr1 manual_curation exon 23019731 23020149 . - . Parent=GSCOCT00029978001 | |
| 7499 chr1 manual_curation exon 23020237 23020318 . - . Parent=GSCOCT00029978001 | |
| 7500 chr1 manual_curation exon 23021381 23021508 . - . Parent=GSCOCT00029978001 | |
| 7501 chr1 manual_curation exon 23021626 23021724 . - . Parent=GSCOCT00029978001 | |
| 7502 chr1 manual_curation exon 23021983 23022138 . - . Parent=GSCOCT00029978001 | |
| 7503 chr1 manual_curation exon 23023378 23023452 . - . Parent=GSCOCT00029978001 | |
| 7504 chr1 manual_curation exon 23023861 23024043 . - . Parent=GSCOCT00029978001 | |
| 7505 chr1 manual_curation exon 23024172 23024319 . - . Parent=GSCOCT00029978001 | |
| 7506 chr1 manual_curation exon 23025522 23025802 . - . Parent=GSCOCT00029978001 | |
| 7507 chr1 manual_curation CDS 23019772 23020149 . - 0 Parent=GSCOCT00029978001 | |
| 7508 chr1 manual_curation CDS 23020237 23020318 . - 2 Parent=GSCOCT00029978001 | |
| 7509 chr1 manual_curation CDS 23021381 23021508 . - 0 Parent=GSCOCT00029978001 | |
| 7510 chr1 manual_curation CDS 23021626 23021724 . - 0 Parent=GSCOCT00029978001 | |
| 7511 chr1 manual_curation CDS 23021983 23022138 . - 0 Parent=GSCOCT00029978001 | |
| 7512 chr1 manual_curation CDS 23023378 23023452 . - 0 Parent=GSCOCT00029978001 | |
| 7513 chr1 manual_curation CDS 23023861 23024043 . - 0 Parent=GSCOCT00029978001 | |
| 7514 chr1 manual_curation CDS 23024172 23024319 . - 2 Parent=GSCOCT00029978001 | |
| 7515 chr1 manual_curation CDS 23025522 23025802 . - 0 Parent=GSCOCT00029978001 | |
| 7516 chr1 manual_curation gene 23052781 23061787 . - . ID=GSCOCG00029980001;Name=Cc01_g06210 | |
| 7517 chr1 manual_curation mRNA 23052781 23061787 . - . ID=GSCOCT00029980001;Parent=GSCOCG00029980001;Name=Cc01_g06210 | |
| 7518 chr1 manual_curation polypeptide 23052781 23061787 . - . ID=GSCOCP00029980001;Dbxref=InterPro:IPR001394,InterPro:IPR018200,PFAM:PF00443,PROFILE:PS50235,PROSITE:PS00972,PROSITE:PS00973,SwissProt:P52479,SwissProt:Q3KR59,SwissProt:Q9FPS3,TAIR:AT3G14400.1,TAIR:AT4G30890.1,TAIR:AT5G57990.1,TrEMBL:D7SQ20,TrEMBL:I1L5I7,TrEMBL:I1LP03;Derives_from=GSCOCT00029980001;Name=Cc01_g06210;Ontology_term=CC_evidence_code:ISS,GO:0004221,GO:0006511,CC_EC_number:3.1.2.15,PRODUCT:Ubiquitin carboxyl-terminal hydrolase,CC_functional_completeness:fragment,CC_gene:UBP24,CC_gene:Usp10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00029980001~ Ubiquitin carboxyl-terminal hydrolase~ UBP24~ fragment;original_location=complement(join(168711..169127%2C168406..168590%2C165351..165614%2C163280..163421%2C161349..161522%2C160121..160309));owner=coffea | |
| 7519 chr1 manual_curation exon 23052781 23052969 . - . Parent=GSCOCT00029980001 | |
| 7520 chr1 manual_curation exon 23054009 23054182 . - . Parent=GSCOCT00029980001 | |
| 7521 chr1 manual_curation exon 23055940 23056081 . - . Parent=GSCOCT00029980001 | |
| 7522 chr1 manual_curation exon 23058011 23058274 . - . Parent=GSCOCT00029980001 | |
| 7523 chr1 manual_curation exon 23061066 23061250 . - . Parent=GSCOCT00029980001 | |
| 7524 chr1 manual_curation exon 23061371 23061787 . - . Parent=GSCOCT00029980001 | |
| 7525 chr1 manual_curation CDS 23052781 23052969 . - 0 Parent=GSCOCT00029980001 | |
| 7526 chr1 manual_curation CDS 23054009 23054182 . - 0 Parent=GSCOCT00029980001 | |
| 7527 chr1 manual_curation CDS 23055940 23056081 . - 2 Parent=GSCOCT00029980001 | |
| 7528 chr1 manual_curation CDS 23058011 23058274 . - 2 Parent=GSCOCT00029980001 | |
| 7529 chr1 manual_curation CDS 23061066 23061250 . - 0 Parent=GSCOCT00029980001 | |
| 7530 chr1 manual_curation CDS 23061371 23061787 . - 0 Parent=GSCOCT00029980001 | |
| 7531 chr1 manual_curation gene 23066579 23067054 . + . ID=GSCOCG00029981001;Name=Cc01_g06220 | |
| 7532 chr1 manual_curation mRNA 23066579 23067054 . + . ID=GSCOCT00029981001;Parent=GSCOCG00029981001;Name=Cc01_g06220 | |
| 7533 chr1 manual_curation polypeptide 23066579 23067054 . + . ID=GSCOCP00029981001;Dbxref=InterPro:IPR007369,PANTHER:PTHR12174,PFAM:PF04258,TAIR:AT2G03120.1,TrEMBL:A9PGG2,TrEMBL:B9SM25,TrEMBL:I1M9Y0;Derives_from=GSCOCT00029981001;Name=Cc01_g06220;Ontology_term=CC_evidence_code:ISS,GO:0004190,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Putative Peptidase A22B%2C signal peptide peptidase,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00029981001~ Putative Peptidase A22B%2C signal peptide peptidase~ unknown_gene~ complete;original_location=join(173919..173960%2C174227..174394);owner=coffea | |
| 7534 chr1 manual_curation exon 23066579 23066620 . + . Parent=GSCOCT00029981001 | |
| 7535 chr1 manual_curation exon 23066887 23067054 . + . Parent=GSCOCT00029981001 | |
| 7536 chr1 manual_curation CDS 23066579 23066620 . + 0 Parent=GSCOCT00029981001 | |
| 7537 chr1 manual_curation CDS 23066887 23067054 . + 0 Parent=GSCOCT00029981001 | |
| 7538 chr1 manual_curation gene 23111338 23127862 . + . ID=GSCOCG00029983001;Name=Cc01_g06230 | |
| 7539 chr1 manual_curation mRNA 23111338 23127862 . + . ID=GSCOCT00029983001;Parent=GSCOCG00029983001;Name=Cc01_g06230 | |
| 7540 chr1 manual_curation polypeptide 23112162 23126971 . + . ID=GSCOCP00029983001;Dbxref=GENE3D:G3DSA:1.10.287.110,GENE3D:G3DSA:1.25.40.10,InterPro:IPR001440,InterPro:IPR001623,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR018253,InterPro:IPR019734,PFAM:PF00226,PFAM:PF00515,PROFILE:PS50076,PROFILE:PS50293,PROSITE:PS00636,SMART:SM00028,SMART:SM00271,SUPERFAMILY:SSF46565,SwissProt:Q5R8D8,SwissProt:Q99615,SwissProt:Q9QYI3,TAIR:AT2G41520.1,TAIR:AT3G58620.1,TAIR:AT5G12430.1,TrEMBL:B9RIG0,TrEMBL:E5GBT1,TrEMBL:F6GWB8;Derives_from=GSCOCT00029983001;Name=Cc01_g06230;Ontology_term=CC_evidence_code:ISS,GO:0005488,GO:0031072,CC_EC_number:missing_EC_number,PRODUCT:Putative DnaJ homolog subfamily C member 7,CC_functional_completeness:modules,CC_gene:DNAJC7,CC_gene:Dnajc7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00029983001~ Putative DnaJ homolog subfamily C member 7~ DNAJC7~ modules;original_location=join(219502..219727%2C219785..221069%2C221262..221501%2C222616..222745%2C224482..224634%2C224766..224974%2C225085..225154%2C227984..228190%2C229470..229702%2C232568..232646%2C232725..232862%2C234114..234311);owner=coffea | |
| 7541 chr1 manual_curation exon 23111338 23112387 . + . Parent=GSCOCT00029983001 | |
| 7542 chr1 manual_curation exon 23112445 23113729 . + . Parent=GSCOCT00029983001 | |
| 7543 chr1 manual_curation exon 23113922 23114161 . + . Parent=GSCOCT00029983001 | |
| 7544 chr1 manual_curation exon 23115276 23115405 . + . Parent=GSCOCT00029983001 | |
| 7545 chr1 manual_curation exon 23117142 23117294 . + . Parent=GSCOCT00029983001 | |
| 7546 chr1 manual_curation exon 23117426 23117634 . + . Parent=GSCOCT00029983001 | |
| 7547 chr1 manual_curation exon 23117745 23117814 . + . Parent=GSCOCT00029983001 | |
| 7548 chr1 manual_curation exon 23120644 23120850 . + . Parent=GSCOCT00029983001 | |
| 7549 chr1 manual_curation exon 23122130 23122362 . + . Parent=GSCOCT00029983001 | |
| 7550 chr1 manual_curation exon 23125228 23125306 . + . Parent=GSCOCT00029983001 | |
| 7551 chr1 manual_curation exon 23125385 23125522 . + . Parent=GSCOCT00029983001 | |
| 7552 chr1 manual_curation exon 23126774 23127862 . + . Parent=GSCOCT00029983001 | |
| 7553 chr1 manual_curation CDS 23112162 23112387 . + 0 Parent=GSCOCT00029983001 | |
| 7554 chr1 manual_curation CDS 23112445 23113729 . + 1 Parent=GSCOCT00029983001 | |
| 7555 chr1 manual_curation CDS 23113922 23114161 . + 2 Parent=GSCOCT00029983001 | |
| 7556 chr1 manual_curation CDS 23115276 23115405 . + 2 Parent=GSCOCT00029983001 | |
| 7557 chr1 manual_curation CDS 23117142 23117294 . + 0 Parent=GSCOCT00029983001 | |
| 7558 chr1 manual_curation CDS 23117426 23117634 . + 0 Parent=GSCOCT00029983001 | |
| 7559 chr1 manual_curation CDS 23117745 23117814 . + 2 Parent=GSCOCT00029983001 | |
| 7560 chr1 manual_curation CDS 23120644 23120850 . + 0 Parent=GSCOCT00029983001 | |
| 7561 chr1 manual_curation CDS 23122130 23122362 . + 0 Parent=GSCOCT00029983001 | |
| 7562 chr1 manual_curation CDS 23125228 23125306 . + 2 Parent=GSCOCT00029983001 | |
| 7563 chr1 manual_curation CDS 23125385 23125522 . + 0 Parent=GSCOCT00029983001 | |
| 7564 chr1 manual_curation CDS 23126774 23126971 . + 0 Parent=GSCOCT00029983001 | |
| 7565 chr1 manual_curation gene 23137462 23142298 . + . ID=GSCOCG00029984001;Name=Cc01_g06240 | |
| 7566 chr1 manual_curation mRNA 23137462 23142298 . + . ID=GSCOCT00029984001;Parent=GSCOCG00029984001;Name=Cc01_g06240 | |
| 7567 chr1 manual_curation polypeptide 23138396 23141883 . + . ID=GSCOCP00029984001;Dbxref=InterPro:IPR001810,InterPro:IPR022364,PFAM:PF00646,PROFILE:PS50181,SMART:SM00256,SUPERFAMILY:SSF81383,SwissProt:Q6NKN8,SwissProt:Q6NLB1,SwissProt:Q8RY82,TAIR:AT2G26850.1,TAIR:AT2G32560.1,TAIR:AT2G41170.1,TrEMBL:B9GG65,TrEMBL:B9HNI4,TrEMBL:F6HA97;Derives_from=GSCOCT00029984001;Name=Cc01_g06240;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:F-box protein At2g32560,CC_functional_completeness:complete,CC_gene:At2g32560,CC_gene:At2g26850,CC_gene:At2g41170;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00029984001~ F-box protein At2g32560~ At2g32560~ complete;original_location=join(245736..245902%2C245996..246428%2C246528..246607%2C246718..246896%2C247702..247776%2C249036..249223);owner=coffea | |
| 7568 chr1 manual_curation exon 23137462 23138562 . + . Parent=GSCOCT00029984001 | |
| 7569 chr1 manual_curation exon 23138656 23139088 . + . Parent=GSCOCT00029984001 | |
| 7570 chr1 manual_curation exon 23139188 23139267 . + . Parent=GSCOCT00029984001 | |
| 7571 chr1 manual_curation exon 23139378 23139556 . + . Parent=GSCOCT00029984001 | |
| 7572 chr1 manual_curation exon 23140362 23140436 . + . Parent=GSCOCT00029984001 | |
| 7573 chr1 manual_curation exon 23141696 23142298 . + . Parent=GSCOCT00029984001 | |
| 7574 chr1 manual_curation CDS 23138396 23138562 . + 0 Parent=GSCOCT00029984001 | |
| 7575 chr1 manual_curation CDS 23138656 23139088 . + 2 Parent=GSCOCT00029984001 | |
| 7576 chr1 manual_curation CDS 23139188 23139267 . + 0 Parent=GSCOCT00029984001 | |
| 7577 chr1 manual_curation CDS 23139378 23139556 . + 2 Parent=GSCOCT00029984001 | |
| 7578 chr1 manual_curation CDS 23140362 23140436 . + 1 Parent=GSCOCT00029984001 | |
| 7579 chr1 manual_curation CDS 23141696 23141883 . + 1 Parent=GSCOCT00029984001 | |
| 7580 chr1 manual_curation gene 23181305 23182263 . + . ID=GSCOCG00029988001;Name=Cc01_g06250 | |
| 7581 chr1 manual_curation mRNA 23181305 23182263 . + . ID=GSCOCT00029988001;Parent=GSCOCG00029988001;Name=Cc01_g06250 | |
| 7582 chr1 manual_curation polypeptide 23181305 23182263 . + . ID=GSCOCP00029988001;Dbxref=GENE3D:G3DSA:2.60.110.10,InterPro:IPR001938,InterPro:IPR017949,PFAM:PF00314,PIR:PIRSF002703,PRINTS:PR00347,PROFILE:PS51367,PROSITE:PS00316,SMART:SM00205,SUPERFAMILY:SSF49870,SwissProt:O80327,SwissProt:P50694,SwissProt:Q9FSG7,TAIR:AT1G20030.2,TAIR:AT1G75800.1,TAIR:AT4G38670.1,TrEMBL:B6E2B4,TrEMBL:B9N6T3,TrEMBL:F6HKD4;Derives_from=GSCOCT00029988001;Name=Cc01_g06250;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Thaumatin%2C pathogenesis-related,CC_functional_completeness:complete,CC_gene:TL1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00029988001~ Putative Thaumatin%2C pathogenesis-related~ TL1~ complete;original_location=join(288645..288664%2C288752..288936%2C289023..289355%2C289398..289603);owner=coffea | |
| 7583 chr1 manual_curation exon 23181305 23181324 . + . Parent=GSCOCT00029988001 | |
| 7584 chr1 manual_curation exon 23181412 23181596 . + . Parent=GSCOCT00029988001 | |
| 7585 chr1 manual_curation exon 23181683 23182015 . + . Parent=GSCOCT00029988001 | |
| 7586 chr1 manual_curation exon 23182058 23182263 . + . Parent=GSCOCT00029988001 | |
| 7587 chr1 manual_curation CDS 23181305 23181324 . + 0 Parent=GSCOCT00029988001 | |
| 7588 chr1 manual_curation CDS 23181412 23181596 . + 2 Parent=GSCOCT00029988001 | |
| 7589 chr1 manual_curation CDS 23181683 23182015 . + 1 Parent=GSCOCT00029988001 | |
| 7590 chr1 manual_curation CDS 23182058 23182263 . + 1 Parent=GSCOCT00029988001 | |
| 7591 chr1 manual_curation gene 23184096 23191283 . - . ID=GSCOCG00029989001;Name=Cc01_g06260 | |
| 7592 chr1 manual_curation mRNA 23184096 23191283 . - . ID=GSCOCT00029989001;Parent=GSCOCG00029989001;Name=Cc01_g06260 | |
| 7593 chr1 manual_curation polypeptide 23184589 23191109 . - . ID=GSCOCP00029989001;Dbxref=TAIR:AT2G26840.2,TAIR:AT3G43910.1,TrEMBL:B9SXW7,TrEMBL:F6HA99,TrEMBL:I1MJN1;Derives_from=GSCOCT00029989001;Name=Cc01_g06260;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00029989001~ Putative unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G26840.1)%3B Has 680 Blast hits to 680 proteins in 17 species: Archae - 0%3B Bacteria - 8%3B Metazoa - 0%3B Fungi - 0%3B Plants - 37%3B Viruses - 0%3B Other Eukaryotes - 635 (source: NCBI BLink).~ unknown_gene~ modules;original_location=complement(join(298036..298449%2C296723..296828%2C296463..296515%2C294829..294960%2C292820..292892%2C291929..292011));owner=coffea | |
| 7594 chr1 manual_curation exon 23184096 23184671 . - . Parent=GSCOCT00029989001 | |
| 7595 chr1 manual_curation exon 23185480 23185552 . - . Parent=GSCOCT00029989001 | |
| 7596 chr1 manual_curation exon 23187489 23187620 . - . Parent=GSCOCT00029989001 | |
| 7597 chr1 manual_curation exon 23189123 23189175 . - . Parent=GSCOCT00029989001 | |
| 7598 chr1 manual_curation exon 23189383 23189488 . - . Parent=GSCOCT00029989001 | |
| 7599 chr1 manual_curation exon 23190696 23191283 . - . Parent=GSCOCT00029989001 | |
| 7600 chr1 manual_curation CDS 23184589 23184671 . - 1 Parent=GSCOCT00029989001 | |
| 7601 chr1 manual_curation CDS 23185480 23185552 . - 0 Parent=GSCOCT00029989001 | |
| 7602 chr1 manual_curation CDS 23187489 23187620 . - 0 Parent=GSCOCT00029989001 | |
| 7603 chr1 manual_curation CDS 23189123 23189175 . - 1 Parent=GSCOCT00029989001 | |
| 7604 chr1 manual_curation CDS 23189383 23189488 . - 0 Parent=GSCOCT00029989001 | |
| 7605 chr1 manual_curation CDS 23190696 23191109 . - 0 Parent=GSCOCT00029989001 | |
| 7606 chr1 manual_curation gene 23197921 23198727 . - . ID=GSCOCG00029991001;Name=Cc01_g06270 | |
| 7607 chr1 manual_curation mRNA 23197921 23198727 . - . ID=GSCOCT00029991001;Parent=GSCOCG00029991001;Name=Cc01_g06270 | |
| 7608 chr1 manual_curation polypeptide 23197921 23198727 . - . ID=GSCOCP00029991001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR000490,InterPro:IPR013781,InterPro:IPR017853,PFAM:PF00332,SUPERFAMILY:SSF51445,SwissProt:P07979,SwissProt:P36401,SwissProt:Q03773,TAIR:AT3G57240.1,TAIR:AT3G57260.1,TAIR:AT4G16260.1,TrEMBL:F6HLM1,TrEMBL:F6HLM4,TrEMBL:Q944C0;Derives_from=GSCOCT00029991001;Name=Cc01_g06270;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0043169,CC_EC_number:3.2.1.39,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:GN1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00029991001~ Putative uncharacterized protein~ GN1~ fragment;original_location=complement(join(305867..306067%2C305261..305365));owner=coffea | |
| 7609 chr1 manual_curation exon 23197921 23198025 . - . Parent=GSCOCT00029991001 | |
| 7610 chr1 manual_curation exon 23198527 23198727 . - . Parent=GSCOCT00029991001 | |
| 7611 chr1 manual_curation CDS 23197921 23198025 . - 0 Parent=GSCOCT00029991001 | |
| 7612 chr1 manual_curation CDS 23198527 23198727 . - 0 Parent=GSCOCT00029991001 | |
| 7613 chr1 manual_curation gene 23201576 23204165 . - . ID=GSCOCG00029992001;Name=Cc01_g06280 | |
| 7614 chr1 manual_curation mRNA 23201576 23204165 . - . ID=GSCOCT00029992001;Parent=GSCOCG00029992001;Name=Cc01_g06280 | |
| 7615 chr1 manual_curation polypeptide 23201943 23204165 . - . ID=GSCOCP00029992001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR000490,InterPro:IPR013781,InterPro:IPR017853,PFAM:PF00332,PROSITE:PS00587,SUPERFAMILY:SSF51445,SwissProt:A7PQW3,SwissProt:P07979,SwissProt:P23547,TAIR:AT3G57240.1,TAIR:AT3G57270.1,TAIR:AT4G16260.1,TrEMBL:A9PG23,TrEMBL:Q56AP0,TrEMBL:Q84RT6;Derives_from=GSCOCT00029992001;Name=Cc01_g06280;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0043169,CC_EC_number:3.2.1.39,PRODUCT:Glucan endo-1%2C3-beta-glucosidase%2C acidic isoform GI9,CC_functional_completeness:complete,CC_gene:PR2,CC_gene:GN1,CC_gene:VIT_06s0061g00120;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00029992001~ Glucan endo-1%2C3-beta-glucosidase%2C acidic isoform GI9~ PR2~ complete;original_location=complement(join(311474..311505%2C311033..311193%2C309283..310244));owner=coffea | |
| 7616 chr1 manual_curation exon 23201576 23202904 . - . Parent=GSCOCT00029992001 | |
| 7617 chr1 manual_curation exon 23203693 23203853 . - . Parent=GSCOCT00029992001 | |
| 7618 chr1 manual_curation exon 23204134 23204165 . - . Parent=GSCOCT00029992001 | |
| 7619 chr1 manual_curation CDS 23201943 23202904 . - 1 Parent=GSCOCT00029992001 | |
| 7620 chr1 manual_curation CDS 23203693 23203853 . - 2 Parent=GSCOCT00029992001 | |
| 7621 chr1 manual_curation CDS 23204134 23204165 . - 0 Parent=GSCOCT00029992001 | |
| 7622 chr1 manual_curation gene 23298111 23299236 . - . ID=GSCOCG00029994001;Name=Cc01_g06290 | |
| 7623 chr1 manual_curation mRNA 23298111 23299236 . - . ID=GSCOCT00029994001;Parent=GSCOCG00029994001;Name=Cc01_g06290 | |
| 7624 chr1 manual_curation polypeptide 23298111 23299236 . - . ID=GSCOCP00029994001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR000490,InterPro:IPR013781,InterPro:IPR017853,PFAM:PF00332,SUPERFAMILY:SSF51445,SwissProt:A7PQW3,SwissProt:P23547,SwissProt:P52399,TAIR:AT3G57260.1,TAIR:AT3G57270.1,TAIR:AT4G16260.1,TrEMBL:G7JQL0,TrEMBL:G7JQL4,TrEMBL:Q56AP0;Derives_from=GSCOCT00029994001;Name=Cc01_g06290;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0043169,CC_EC_number:3.2.1.39,PRODUCT:Putative Glucan endo-1%2C3-beta-glucosidase%2C acidic isoform GI9,CC_functional_completeness:complete,CC_gene:PR2,CC_gene:VIT_06s0061g00120,CC_gene:GGL4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00029994001~ Putative Glucan endo-1%2C3-beta-glucosidase%2C acidic isoform GI9~ PR2~ complete;original_location=complement(join(406568..406576%2C406187..406440%2C405451..406141));owner=coffea | |
| 7625 chr1 manual_curation exon 23298111 23298801 . - . Parent=GSCOCT00029994001 | |
| 7626 chr1 manual_curation exon 23298847 23299100 . - . Parent=GSCOCT00029994001 | |
| 7627 chr1 manual_curation exon 23299228 23299236 . - . Parent=GSCOCT00029994001 | |
| 7628 chr1 manual_curation CDS 23298111 23298801 . - 2 Parent=GSCOCT00029994001 | |
| 7629 chr1 manual_curation CDS 23298847 23299100 . - 0 Parent=GSCOCT00029994001 | |
| 7630 chr1 manual_curation CDS 23299228 23299236 . - 0 Parent=GSCOCT00029994001 | |
| 7631 chr1 manual_curation gene 23310465 23312557 . - . ID=GSCOCG00029995001;Name=Cc01_g06300 | |
| 7632 chr1 manual_curation mRNA 23310465 23312557 . - . ID=GSCOCT00029995001;Parent=GSCOCG00029995001;Name=Cc01_g06300 | |
| 7633 chr1 manual_curation polypeptide 23310465 23312442 . - . ID=GSCOCP00029995001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR000490,InterPro:IPR013781,InterPro:IPR017853,PFAM:PF00332,PROSITE:PS00587,SUPERFAMILY:SSF51445,SwissProt:A7PQW3,SwissProt:P23547,SwissProt:P52399,TAIR:AT3G57260.1,TAIR:AT3G57270.1,TAIR:AT4G16260.1,TrEMBL:A9PG23,TrEMBL:Q56AP0,TrEMBL:Q84RT6;Derives_from=GSCOCT00029995001;Name=Cc01_g06300;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0043169,CC_EC_number:3.2.1.39,PRODUCT:Glucan endo-1%2C3-beta-glucosidase%2C acidic isoform GI9,CC_functional_completeness:complete,CC_gene:PR2,CC_gene:VIT_06s0061g00120,CC_gene:GGL4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00029995001~ Glucan endo-1%2C3-beta-glucosidase%2C acidic isoform GI9~ PR2~ complete;original_location=complement(join(419728..419782%2C417805..418766));owner=coffea | |
| 7634 chr1 manual_curation exon 23310465 23311426 . - . Parent=GSCOCT00029995001 | |
| 7635 chr1 manual_curation exon 23312388 23312557 . - . Parent=GSCOCT00029995001 | |
| 7636 chr1 manual_curation CDS 23310465 23311426 . - 1 Parent=GSCOCT00029995001 | |
| 7637 chr1 manual_curation CDS 23312388 23312442 . - 0 Parent=GSCOCT00029995001 | |
| 7638 chr1 manual_curation gene 23320037 23336063 . + . ID=GSCOCG00029996001;Name=Cc01_g06310 | |
| 7639 chr1 manual_curation mRNA 23320037 23336063 . + . ID=GSCOCT00029996001;Parent=GSCOCG00029996001;Name=Cc01_g06310 | |
| 7640 chr1 manual_curation polypeptide 23321085 23335711 . + . ID=GSCOCP00029996001;Dbxref=SwissProt:A1CZJ3,SwissProt:Q84L09,SwissProt:Q941R4,TAIR:AT1G07290.1,TAIR:AT1G77610.1,TAIR:AT2G13650.1,TrEMBL:B9H483,TrEMBL:F6I0E3,TrEMBL:G7JBL1;Derives_from=GSCOCT00029996001;Name=Cc01_g06310;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:GDP-mannose transporter GONST1,CC_functional_completeness:complete,CC_gene:GONST1,CC_gene:GONST2,CC_gene:gmt1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00029996001~ GDP-mannose transporter GONST1~ GONST1~ complete;original_location=join(428425..428468%2C428781..428951%2C432719..432956%2C433064..433203%2C436136..436265%2C437421..437519%2C440254..440408%2C441247..441363%2C442815..442912%2C442999..443051);owner=coffea | |
| 7641 chr1 manual_curation exon 23320037 23321128 . + . Parent=GSCOCT00029996001 | |
| 7642 chr1 manual_curation exon 23321441 23321611 . + . Parent=GSCOCT00029996001 | |
| 7643 chr1 manual_curation exon 23325379 23325616 . + . Parent=GSCOCT00029996001 | |
| 7644 chr1 manual_curation exon 23325724 23325863 . + . Parent=GSCOCT00029996001 | |
| 7645 chr1 manual_curation exon 23328796 23328925 . + . Parent=GSCOCT00029996001 | |
| 7646 chr1 manual_curation exon 23330081 23330179 . + . Parent=GSCOCT00029996001 | |
| 7647 chr1 manual_curation exon 23332914 23333068 . + . Parent=GSCOCT00029996001 | |
| 7648 chr1 manual_curation exon 23333907 23334023 . + . Parent=GSCOCT00029996001 | |
| 7649 chr1 manual_curation exon 23335475 23335572 . + . Parent=GSCOCT00029996001 | |
| 7650 chr1 manual_curation exon 23335659 23336063 . + . Parent=GSCOCT00029996001 | |
| 7651 chr1 manual_curation CDS 23321085 23321128 . + 0 Parent=GSCOCT00029996001 | |
| 7652 chr1 manual_curation CDS 23321441 23321611 . + 2 Parent=GSCOCT00029996001 | |
| 7653 chr1 manual_curation CDS 23325379 23325616 . + 2 Parent=GSCOCT00029996001 | |
| 7654 chr1 manual_curation CDS 23325724 23325863 . + 0 Parent=GSCOCT00029996001 | |
| 7655 chr1 manual_curation CDS 23328796 23328925 . + 2 Parent=GSCOCT00029996001 | |
| 7656 chr1 manual_curation CDS 23330081 23330179 . + 0 Parent=GSCOCT00029996001 | |
| 7657 chr1 manual_curation CDS 23332914 23333068 . + 0 Parent=GSCOCT00029996001 | |
| 7658 chr1 manual_curation CDS 23333907 23334023 . + 2 Parent=GSCOCT00029996001 | |
| 7659 chr1 manual_curation CDS 23335475 23335572 . + 2 Parent=GSCOCT00029996001 | |
| 7660 chr1 manual_curation CDS 23335659 23335711 . + 1 Parent=GSCOCT00029996001 | |
| 7661 chr1 manual_curation gene 23338918 23343773 . - . ID=GSCOCG00029997001;Name=Cc01_g06320 | |
| 7662 chr1 manual_curation mRNA 23338918 23343773 . - . ID=GSCOCT00029997001;Parent=GSCOCG00029997001;Name=Cc01_g06320 | |
| 7663 chr1 manual_curation polypeptide 23339220 23343755 . - . ID=GSCOCP00029997001;Dbxref=InterPro:IPR019410,PFAM:PF10294,TAIR:AT2G26810.1,TrEMBL:B9HNI1,TrEMBL:D7LEU6,TrEMBL:Q8GYQ2;Derives_from=GSCOCT00029997001;Name=Cc01_g06320;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative methyltransferase family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00029997001~ Putative methyltransferase family protein~ unknown_gene~ complete;original_location=complement(join(451025..451095%2C450840..450907%2C450260..450379%2C449089..449153%2C448939..448996%2C448784..448866%2C448090..448187%2C446560..446680));owner=coffea | |
| 7664 chr1 manual_curation exon 23338918 23339340 . - . Parent=GSCOCT00029997001 | |
| 7665 chr1 manual_curation exon 23340750 23340847 . - . Parent=GSCOCT00029997001 | |
| 7666 chr1 manual_curation exon 23341444 23341526 . - . Parent=GSCOCT00029997001 | |
| 7667 chr1 manual_curation exon 23341599 23341656 . - . Parent=GSCOCT00029997001 | |
| 7668 chr1 manual_curation exon 23341749 23341813 . - . Parent=GSCOCT00029997001 | |
| 7669 chr1 manual_curation exon 23342920 23343039 . - . Parent=GSCOCT00029997001 | |
| 7670 chr1 manual_curation exon 23343500 23343567 . - . Parent=GSCOCT00029997001 | |
| 7671 chr1 manual_curation exon 23343685 23343773 . - . Parent=GSCOCT00029997001 | |
| 7672 chr1 manual_curation CDS 23339220 23339340 . - 2 Parent=GSCOCT00029997001 | |
| 7673 chr1 manual_curation CDS 23340750 23340847 . - 0 Parent=GSCOCT00029997001 | |
| 7674 chr1 manual_curation CDS 23341444 23341526 . - 1 Parent=GSCOCT00029997001 | |
| 7675 chr1 manual_curation CDS 23341599 23341656 . - 0 Parent=GSCOCT00029997001 | |
| 7676 chr1 manual_curation CDS 23341749 23341813 . - 1 Parent=GSCOCT00029997001 | |
| 7677 chr1 manual_curation CDS 23342920 23343039 . - 1 Parent=GSCOCT00029997001 | |
| 7678 chr1 manual_curation CDS 23343500 23343567 . - 2 Parent=GSCOCT00029997001 | |
| 7679 chr1 manual_curation CDS 23343685 23343755 . - 0 Parent=GSCOCT00029997001 | |
| 7680 chr1 manual_curation gene 23361887 23367740 . + . ID=GSCOCG00030001001;Name=Cc01_g06330 | |
| 7681 chr1 manual_curation mRNA 23361887 23367740 . + . ID=GSCOCT00030001001;Parent=GSCOCG00030001001;Name=Cc01_g06330 | |
| 7682 chr1 manual_curation polypeptide 23361887 23367114 . + . ID=GSCOCP00030001001;Dbxref=GENE3D:G3DSA:3.20.20.70,InterPro:IPR000891,InterPro:IPR013785,PFAM:PF00682,PROFILE:PS50991,SwissProt:O81027,SwissProt:P38060,SwissProt:Q8JZS7,TAIR:AT2G26800.2,TrEMBL:D7T1A1,TrEMBL:I1KML6,TrEMBL:I1NDY2;Derives_from=GSCOCT00030001001;Name=Cc01_g06330;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,CC_EC_number:4.1.3.4,PRODUCT:Hydroxymethylglutaryl-CoA lyase%2C mitochondrial,CC_functional_completeness:complete,CC_gene:HMGCL,CC_gene:Hmgcll1,CC_gene:Hmgcl;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030001001~ Hydroxymethylglutaryl-CoA lyase%2C mitochondrial~ HMGCL~ complete;original_location=join(469227..469390%2C469958..470162%2C470433..470612%2C471384..471464%2C471563..471726%2C472614..472750%2C473624..473739%2C474206..474454);owner=coffea | |
| 7683 chr1 manual_curation exon 23361887 23362050 . + . Parent=GSCOCT00030001001 | |
| 7684 chr1 manual_curation exon 23362618 23362822 . + . Parent=GSCOCT00030001001 | |
| 7685 chr1 manual_curation exon 23363093 23363272 . + . Parent=GSCOCT00030001001 | |
| 7686 chr1 manual_curation exon 23364044 23364124 . + . Parent=GSCOCT00030001001 | |
| 7687 chr1 manual_curation exon 23364223 23364386 . + . Parent=GSCOCT00030001001 | |
| 7688 chr1 manual_curation exon 23365274 23365410 . + . Parent=GSCOCT00030001001 | |
| 7689 chr1 manual_curation exon 23366284 23366399 . + . Parent=GSCOCT00030001001 | |
| 7690 chr1 manual_curation exon 23366866 23367740 . + . Parent=GSCOCT00030001001 | |
| 7691 chr1 manual_curation CDS 23361887 23362050 . + 0 Parent=GSCOCT00030001001 | |
| 7692 chr1 manual_curation CDS 23362618 23362822 . + 2 Parent=GSCOCT00030001001 | |
| 7693 chr1 manual_curation CDS 23363093 23363272 . + 0 Parent=GSCOCT00030001001 | |
| 7694 chr1 manual_curation CDS 23364044 23364124 . + 0 Parent=GSCOCT00030001001 | |
| 7695 chr1 manual_curation CDS 23364223 23364386 . + 0 Parent=GSCOCT00030001001 | |
| 7696 chr1 manual_curation CDS 23365274 23365410 . + 2 Parent=GSCOCT00030001001 | |
| 7697 chr1 manual_curation CDS 23366284 23366399 . + 1 Parent=GSCOCT00030001001 | |
| 7698 chr1 manual_curation CDS 23366866 23367114 . + 0 Parent=GSCOCT00030001001 | |
| 7699 chr1 manual_curation gene 23396516 23401951 . + . ID=GSCOCG00030011001;Name=Cc01_g06340 | |
| 7700 chr1 manual_curation mRNA 23396516 23401951 . + . ID=GSCOCT00030011001;Parent=GSCOCG00030011001;Name=Cc01_g06340 | |
| 7701 chr1 manual_curation polypeptide 23397047 23401513 . + . ID=GSCOCP00030011001;Dbxref=TAIR:AT5G12240.1,TrEMBL:C6T5D5,TrEMBL:D7T1A8,TrEMBL:G7KCU3;Derives_from=GSCOCT00030011001;Name=Cc01_g06340;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030011001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=join(504387..504452%2C505366..505419%2C505497..505554%2C506214..506254%2C508570..508629%2C508785..508853);owner=coffea | |
| 7702 chr1 manual_curation exon 23396516 23396776 . + . Parent=GSCOCT00030011001 | |
| 7703 chr1 manual_curation exon 23397029 23397112 . + . Parent=GSCOCT00030011001 | |
| 7704 chr1 manual_curation exon 23398026 23398079 . + . Parent=GSCOCT00030011001 | |
| 7705 chr1 manual_curation exon 23398157 23398214 . + . Parent=GSCOCT00030011001 | |
| 7706 chr1 manual_curation exon 23398874 23398914 . + . Parent=GSCOCT00030011001 | |
| 7707 chr1 manual_curation exon 23401230 23401289 . + . Parent=GSCOCT00030011001 | |
| 7708 chr1 manual_curation exon 23401445 23401951 . + . Parent=GSCOCT00030011001 | |
| 7709 chr1 manual_curation CDS 23397047 23397112 . + 0 Parent=GSCOCT00030011001 | |
| 7710 chr1 manual_curation CDS 23398026 23398079 . + 0 Parent=GSCOCT00030011001 | |
| 7711 chr1 manual_curation CDS 23398157 23398214 . + 0 Parent=GSCOCT00030011001 | |
| 7712 chr1 manual_curation CDS 23398874 23398914 . + 1 Parent=GSCOCT00030011001 | |
| 7713 chr1 manual_curation CDS 23401230 23401289 . + 0 Parent=GSCOCT00030011001 | |
| 7714 chr1 manual_curation CDS 23401445 23401513 . + 0 Parent=GSCOCT00030011001 | |
| 7715 chr1 manual_curation gene 23402338 23402754 . - . ID=GSCOCG00030012001;Name=Cc01_g06350 | |
| 7716 chr1 manual_curation mRNA 23402338 23402754 . - . ID=GSCOCT00030012001;Parent=GSCOCG00030012001;Name=Cc01_g06350 | |
| 7717 chr1 manual_curation polypeptide 23402338 23402754 . - . ID=GSCOCP00030012001;Dbxref=GENE3D:G3DSA:2.40.50.140,HAMAP:MF_00216,InterPro:IPR001253,InterPro:IPR006196,InterPro:IPR012340,InterPro:IPR016027,PANTHER:PTHR21668,PFAM:PF01176,PRODOM:PD005579,PROFILE:PS50832,SMART:SM00652,SUPERFAMILY:SSF50249,SwissProt:P47815,SwissProt:P56331,SwissProt:Q5RA42,TAIR:AT2G04520.1,TAIR:AT5G35680.3,TIGRFAMs:TIGR00523,TrEMBL:A9NLE4,TrEMBL:I1JRW5,TrEMBL:Q2XTB8;Derives_from=GSCOCT00030012001;Name=Cc01_g06350;Ontology_term=CC_evidence_code:ISS,GO:0003723,GO:0003743,GO:0006413,CC_EC_number:missing_EC_number,PRODUCT:Eukaryotic translation initiation factor 1A,CC_functional_completeness:fragment,CC_gene:EIF1AX;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030012001~ Eukaryotic translation initiation factor 1A~ EIF1AX~ fragment;original_location=complement(509678..510094);owner=coffea | |
| 7718 chr1 manual_curation exon 23402338 23402754 . - . Parent=GSCOCT00030012001 | |
| 7719 chr1 manual_curation CDS 23402338 23402754 . - 0 Parent=GSCOCT00030012001 | |
| 7720 chr1 manual_curation gene 23407542 23407973 . - . ID=GSCOCG00030013001;Name=Cc01_g06360 | |
| 7721 chr1 manual_curation mRNA 23407542 23407973 . - . ID=GSCOCT00030013001;Parent=GSCOCG00030013001;Name=Cc01_g06360 | |
| 7722 chr1 manual_curation polypeptide 23407542 23407973 . - . ID=GSCOCP00030013001;Dbxref=GENE3D:G3DSA:2.40.50.140,HAMAP:MF_00216,InterPro:IPR001253,InterPro:IPR006196,InterPro:IPR012340,InterPro:IPR016027,InterPro:IPR018104,PANTHER:PTHR21668,PFAM:PF01176,PRODOM:PD005579,PROFILE:PS50832,PROSITE:PS01262,SMART:SM00652,SUPERFAMILY:SSF50249,SwissProt:P47815,SwissProt:P56331,SwissProt:Q5RA42,TAIR:AT2G04520.1,TAIR:AT5G35680.3,TIGRFAMs:TIGR00523,TrEMBL:A5BQH0,TrEMBL:A9NLE4,TrEMBL:Q2XTB8;Derives_from=GSCOCT00030013001;Name=Cc01_g06360;Ontology_term=CC_evidence_code:ISS,GO:0003723,GO:0003743,GO:0006413,CC_EC_number:missing_EC_number,PRODUCT:Eukaryotic translation initiation factor 1A,CC_functional_completeness:complete,CC_gene:EIF1AX;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030013001~ Eukaryotic translation initiation factor 1A~ EIF1AX~ complete;original_location=complement(514882..515313);owner=coffea | |
| 7723 chr1 manual_curation exon 23407542 23407973 . - . Parent=GSCOCT00030013001 | |
| 7724 chr1 manual_curation CDS 23407542 23407973 . - 0 Parent=GSCOCT00030013001 | |
| 7725 chr1 manual_curation gene 23410849 23415777 . + . ID=GSCOCG00030014001;Name=Cc01_g06370 | |
| 7726 chr1 manual_curation mRNA 23410849 23415777 . + . ID=GSCOCT00030014001;Parent=GSCOCG00030014001;Name=Cc01_g06370 | |
| 7727 chr1 manual_curation polypeptide 23411026 23415402 . + . ID=GSCOCP00030014001;Dbxref=InterPro:IPR021036,PFAM:PF12298,TAIR:AT2G02880.1,TAIR:AT5G62270.2,TrEMBL:B9SP49,TrEMBL:D7T2A4,TrEMBL:Q8S2G4;Derives_from=GSCOCT00030014001;Name=Cc01_g06370;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030014001~ FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B BEST Arabidopsis thaliana protein match is: mucin-related (TAIR:AT2G02880.1).~ unknown_gene~ complete;original_location=join(518366..519099%2C521707..521896%2C522524..522742);owner=coffea | |
| 7728 chr1 manual_curation exon 23410849 23411759 . + . Parent=GSCOCT00030014001 | |
| 7729 chr1 manual_curation exon 23414367 23414556 . + . Parent=GSCOCT00030014001 | |
| 7730 chr1 manual_curation exon 23415184 23415777 . + . Parent=GSCOCT00030014001 | |
| 7731 chr1 manual_curation CDS 23411026 23411759 . + 0 Parent=GSCOCT00030014001 | |
| 7732 chr1 manual_curation CDS 23414367 23414556 . + 2 Parent=GSCOCT00030014001 | |
| 7733 chr1 manual_curation CDS 23415184 23415402 . + 0 Parent=GSCOCT00030014001 | |
| 7734 chr1 manual_curation gene 23428355 23433237 . + . ID=GSCOCG00030015001;Name=Cc01_g06380 | |
| 7735 chr1 manual_curation mRNA 23428355 23433237 . + . ID=GSCOCT00030015001;Parent=GSCOCG00030015001;Name=Cc01_g06380 | |
| 7736 chr1 manual_curation polypeptide 23428355 23432889 . + . ID=GSCOCP00030015001;Dbxref=InterPro:IPR001353,InterPro:IPR016050,PFAM:PF00227,PROSITE:PS00854,SwissProt:P99026,SwissProt:Q3T108,SwissProt:Q7DLR9,TAIR:AT1G56450.1,TrEMBL:B9H9B4,TrEMBL:B9IKM7,TrEMBL:D7SKV3;Derives_from=GSCOCT00030015001;Name=Cc01_g06380;Ontology_term=CC_evidence_code:ISS,GO:0004175,GO:0004298,GO:0005839,GO:0051603,CC_EC_number:3.4.25.1,PRODUCT:Proteasome subunit beta type-4,CC_functional_completeness:modules,CC_gene:PBG1,CC_gene:Psmb4,CC_gene:PSMB4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030015001~ Proteasome subunit beta type-4~ PBG1~ modules;original_location=join(535695..535793%2C536072..536152%2C536242..536318%2C536615..536691%2C538155..538284%2C538439..538598%2C538685..538870%2C540116..540229);owner=coffea | |
| 7737 chr1 manual_curation exon 23428355 23428453 . + . Parent=GSCOCT00030015001 | |
| 7738 chr1 manual_curation exon 23428732 23428812 . + . Parent=GSCOCT00030015001 | |
| 7739 chr1 manual_curation exon 23428902 23428978 . + . Parent=GSCOCT00030015001 | |
| 7740 chr1 manual_curation exon 23429275 23429351 . + . Parent=GSCOCT00030015001 | |
| 7741 chr1 manual_curation exon 23430815 23430944 . + . Parent=GSCOCT00030015001 | |
| 7742 chr1 manual_curation exon 23431099 23431258 . + . Parent=GSCOCT00030015001 | |
| 7743 chr1 manual_curation exon 23431345 23431530 . + . Parent=GSCOCT00030015001 | |
| 7744 chr1 manual_curation exon 23432776 23433237 . + . Parent=GSCOCT00030015001 | |
| 7745 chr1 manual_curation CDS 23428355 23428453 . + 0 Parent=GSCOCT00030015001 | |
| 7746 chr1 manual_curation CDS 23428732 23428812 . + 0 Parent=GSCOCT00030015001 | |
| 7747 chr1 manual_curation CDS 23428902 23428978 . + 0 Parent=GSCOCT00030015001 | |
| 7748 chr1 manual_curation CDS 23429275 23429351 . + 2 Parent=GSCOCT00030015001 | |
| 7749 chr1 manual_curation CDS 23430815 23430944 . + 1 Parent=GSCOCT00030015001 | |
| 7750 chr1 manual_curation CDS 23431099 23431258 . + 2 Parent=GSCOCT00030015001 | |
| 7751 chr1 manual_curation CDS 23431345 23431530 . + 0 Parent=GSCOCT00030015001 | |
| 7752 chr1 manual_curation CDS 23432776 23432889 . + 0 Parent=GSCOCT00030015001 | |
| 7753 chr1 manual_curation gene 23435509 23436284 . - . ID=GSCOCG00030017001;Name=Cc01_g06390 | |
| 7754 chr1 manual_curation mRNA 23435509 23436284 . - . ID=GSCOCT00030017001;Parent=GSCOCG00030017001;Name=Cc01_g06390 | |
| 7755 chr1 manual_curation polypeptide 23435509 23436284 . - . ID=GSCOCP00030017001;Dbxref=InterPro:IPR002487,PFAM:PF01486,PROFILE:PS51297,SwissProt:O64645,TAIR:AT2G45660.1,TAIR:AT4G22950.1,TAIR:AT5G62165.1,TrEMBL:A9YTS4,TrEMBL:B9I4G5,TrEMBL:Q9ATE7;Derives_from=GSCOCT00030017001;Name=Cc01_g06390;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0005634,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:SOC1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030017001~ Hypothetical protein~ SOC1~ missing_functional_completeness;original_location=complement(join(543575..543624%2C543323..543422%2C543079..543120%2C542849..542980));owner=coffea | |
| 7756 chr1 manual_curation exon 23435509 23435640 . - . Parent=GSCOCT00030017001 | |
| 7757 chr1 manual_curation exon 23435739 23435780 . - . Parent=GSCOCT00030017001 | |
| 7758 chr1 manual_curation exon 23435983 23436082 . - . Parent=GSCOCT00030017001 | |
| 7759 chr1 manual_curation exon 23436235 23436284 . - . Parent=GSCOCT00030017001 | |
| 7760 chr1 manual_curation CDS 23435509 23435640 . - 0 Parent=GSCOCT00030017001 | |
| 7761 chr1 manual_curation CDS 23435739 23435780 . - 0 Parent=GSCOCT00030017001 | |
| 7762 chr1 manual_curation CDS 23435983 23436082 . - 2 Parent=GSCOCT00030017001 | |
| 7763 chr1 manual_curation CDS 23436235 23436284 . - 0 Parent=GSCOCT00030017001 | |
| 7764 chr1 manual_curation gene 23438275 23441659 . + . ID=GSCOCG00030018001;Name=Cc01_g06400 | |
| 7765 chr1 manual_curation mRNA 23438275 23441659 . + . ID=GSCOCT00030018001;Parent=GSCOCG00030018001;Name=Cc01_g06400 | |
| 7766 chr1 manual_curation polypeptide 23438709 23440462 . + . ID=GSCOCP00030018001;Dbxref=HAMAP:MF_00376,InterPro:IPR001977,PFAM:PF01121,PROFILE:PS51219,SwissProt:Q0P4C4,SwissProt:Q71ZA4,SwissProt:Q92BF2,TAIR:AT2G27490.1,TIGRFAMs:TIGR00152,TrEMBL:A5C4Z5,TrEMBL:B9RM89,TrEMBL:D7U254;Derives_from=GSCOCT00030018001;Name=Cc01_g06400;Ontology_term=CC_evidence_code:ISS,GO:0004140,GO:0005524,GO:0015937,CC_EC_number:2.7.1.24,PRODUCT:Putative Dephospho-CoA kinase,CC_functional_completeness:modules,CC_gene:coaE,CC_gene:dcakd;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030018001~ Putative Dephospho-CoA kinase~ coaE~ modules;original_location=join(546049..546156%2C546440..546585%2C547367..547802);owner=coffea | |
| 7767 chr1 manual_curation exon 23438275 23438816 . + . Parent=GSCOCT00030018001 | |
| 7768 chr1 manual_curation exon 23439100 23439245 . + . Parent=GSCOCT00030018001 | |
| 7769 chr1 manual_curation exon 23440027 23441659 . + . Parent=GSCOCT00030018001 | |
| 7770 chr1 manual_curation CDS 23438709 23438816 . + 0 Parent=GSCOCT00030018001 | |
| 7771 chr1 manual_curation CDS 23439100 23439245 . + 0 Parent=GSCOCT00030018001 | |
| 7772 chr1 manual_curation CDS 23440027 23440462 . + 2 Parent=GSCOCT00030018001 | |
| 7773 chr1 manual_curation gene 23443335 23445971 . - . ID=GSCOCG00030020001;Name=Cc01_g06410 | |
| 7774 chr1 manual_curation mRNA 23443335 23445971 . - . ID=GSCOCT00030020001;Parent=GSCOCG00030020001;Name=Cc01_g06410 | |
| 7775 chr1 manual_curation polypeptide 23443540 23445722 . - . ID=GSCOCP00030020001;Dbxref=GENE3D:G3DSA:3.40.50.720,HAMAP:MF_01576,InterPro:IPR000672,InterPro:IPR016040,InterPro:IPR020630,InterPro:IPR020631,InterPro:IPR020867,PFAM:PF00763,PFAM:PF02882,PRINTS:PR00085,PROSITE:PS00766,PROSITE:PS00767,SwissProt:A0LE04,SwissProt:A5GAM5,SwissProt:Q2RIB4,TAIR:AT2G38660.1,TAIR:AT3G12290.1,TAIR:AT4G00620.1,TrEMBL:B9T0V4,TrEMBL:C6TMV9,TrEMBL:F6HZ29;Derives_from=GSCOCT00030020001;Name=Cc01_g06410;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,GO:0009396,CC_EC_number:1.5.1.5,PRODUCT:Bifunctional protein FolD,CC_functional_completeness:complete,CC_gene:folD;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030020001~ Bifunctional protein FolD~ folD~ complete;original_location=complement(join(552949..553062%2C552532..552715%2C551913..552083%2C551575..551807%2C550880..551110));owner=coffea | |
| 7776 chr1 manual_curation exon 23443335 23443770 . - . Parent=GSCOCT00030020001 | |
| 7777 chr1 manual_curation exon 23444235 23444467 . - . Parent=GSCOCT00030020001 | |
| 7778 chr1 manual_curation exon 23444573 23444743 . - . Parent=GSCOCT00030020001 | |
| 7779 chr1 manual_curation exon 23445192 23445375 . - . Parent=GSCOCT00030020001 | |
| 7780 chr1 manual_curation exon 23445609 23445971 . - . Parent=GSCOCT00030020001 | |
| 7781 chr1 manual_curation CDS 23443540 23443770 . - 0 Parent=GSCOCT00030020001 | |
| 7782 chr1 manual_curation CDS 23444235 23444467 . - 1 Parent=GSCOCT00030020001 | |
| 7783 chr1 manual_curation CDS 23444573 23444743 . - 1 Parent=GSCOCT00030020001 | |
| 7784 chr1 manual_curation CDS 23445192 23445375 . - 0 Parent=GSCOCT00030020001 | |
| 7785 chr1 manual_curation CDS 23445609 23445722 . - 0 Parent=GSCOCT00030020001 | |
| 7786 chr1 manual_curation gene 23447969 23448498 . + . ID=GSCOCG00030022001;Name=Cc01_g06420 | |
| 7787 chr1 manual_curation mRNA 23447969 23448498 . + . ID=GSCOCT00030022001;Parent=GSCOCG00030022001;Name=Cc01_g06420 | |
| 7788 chr1 manual_curation polypeptide 23447969 23448498 . + . ID=GSCOCP00030022001;Dbxref=InterPro:IPR001353,PFAM:PF00227,SwissProt:P99026,SwissProt:Q3T108,SwissProt:Q7DLR9,TAIR:AT1G56450.1,TrEMBL:B7FJ04,TrEMBL:F2VPR6,TrEMBL:G7KN41;Derives_from=GSCOCT00030022001;Name=Cc01_g06420;Ontology_term=CC_evidence_code:ISS,GO:0004298,GO:0005839,GO:0051603,CC_EC_number:3.4.25.1,PRODUCT:Putative Proteasome%2C subunit alpha/beta,CC_functional_completeness:complete,CC_gene:PBG1,CC_gene:PSMB4,CC_gene:Psmb4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030022001~ Putative Proteasome%2C subunit alpha/beta~ PBG1~ complete;original_location=join(555309..555398%2C555485..555838);owner=coffea | |
| 7789 chr1 manual_curation exon 23447969 23448058 . + . Parent=GSCOCT00030022001 | |
| 7790 chr1 manual_curation exon 23448145 23448498 . + . Parent=GSCOCT00030022001 | |
| 7791 chr1 manual_curation CDS 23447969 23448058 . + 0 Parent=GSCOCT00030022001 | |
| 7792 chr1 manual_curation CDS 23448145 23448498 . + 0 Parent=GSCOCT00030022001 | |
| 7793 chr1 manual_curation gene 23452724 23463315 . + . ID=GSCOCG00030024001;Name=Cc01_g06430 | |
| 7794 chr1 manual_curation mRNA 23452724 23463315 . + . ID=GSCOCT00030024001;Parent=GSCOCG00030024001;Name=Cc01_g06430 | |
| 7795 chr1 manual_curation polypeptide 23453284 23463139 . + . ID=GSCOCP00030024001;Dbxref=InterPro:IPR004598,PANTHER:PTHR13152,PFAM:PF03849,SwissProt:O70422,SwissProt:P60027,SwissProt:Q92759,TAIR:AT4G17020.3,TIGRFAMs:TIGR00625,TrEMBL:A5BMX1,TrEMBL:B9H2W7,TrEMBL:B9RZ76;Derives_from=GSCOCT00030024001;Name=Cc01_g06430;Ontology_term=CC_evidence_code:ISS,GO:0003702,GO:0005634,GO:0006281,CC_EC_number:missing_EC_number,PRODUCT:Putative General transcription factor IIH subunit 4,CC_functional_completeness:complete,CC_gene:GTF2H4,CC_gene:Gtf2h4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030024001~ Putative General transcription factor IIH subunit 4~ GTF2H4~ complete;original_location=join(560624..560736%2C560837..561004%2C562101..562169%2C564100..564193%2C564368..564471%2C564562..564610%2C564680..564739%2C566044..566112%2C566322..566405%2C566502..566585%2C566845..566930%2C568912..569002%2C569989..570069%2C570178..570252%2C570342..570479);owner=coffea | |
| 7796 chr1 manual_curation exon 23452724 23452857 . + . Parent=GSCOCT00030024001 | |
| 7797 chr1 manual_curation exon 23453110 23453396 . + . Parent=GSCOCT00030024001 | |
| 7798 chr1 manual_curation exon 23453497 23453664 . + . Parent=GSCOCT00030024001 | |
| 7799 chr1 manual_curation exon 23454761 23454829 . + . Parent=GSCOCT00030024001 | |
| 7800 chr1 manual_curation exon 23456760 23456853 . + . Parent=GSCOCT00030024001 | |
| 7801 chr1 manual_curation exon 23457028 23457131 . + . Parent=GSCOCT00030024001 | |
| 7802 chr1 manual_curation exon 23457222 23457270 . + . Parent=GSCOCT00030024001 | |
| 7803 chr1 manual_curation exon 23457340 23457399 . + . Parent=GSCOCT00030024001 | |
| 7804 chr1 manual_curation exon 23458704 23458772 . + . Parent=GSCOCT00030024001 | |
| 7805 chr1 manual_curation exon 23458982 23459065 . + . Parent=GSCOCT00030024001 | |
| 7806 chr1 manual_curation exon 23459162 23459245 . + . Parent=GSCOCT00030024001 | |
| 7807 chr1 manual_curation exon 23459505 23459590 . + . Parent=GSCOCT00030024001 | |
| 7808 chr1 manual_curation exon 23461572 23461662 . + . Parent=GSCOCT00030024001 | |
| 7809 chr1 manual_curation exon 23462649 23462729 . + . Parent=GSCOCT00030024001 | |
| 7810 chr1 manual_curation exon 23462838 23462912 . + . Parent=GSCOCT00030024001 | |
| 7811 chr1 manual_curation exon 23463002 23463315 . + . Parent=GSCOCT00030024001 | |
| 7812 chr1 manual_curation CDS 23453284 23453396 . + 0 Parent=GSCOCT00030024001 | |
| 7813 chr1 manual_curation CDS 23453497 23453664 . + 2 Parent=GSCOCT00030024001 | |
| 7814 chr1 manual_curation CDS 23454761 23454829 . + 2 Parent=GSCOCT00030024001 | |
| 7815 chr1 manual_curation CDS 23456760 23456853 . + 2 Parent=GSCOCT00030024001 | |
| 7816 chr1 manual_curation CDS 23457028 23457131 . + 0 Parent=GSCOCT00030024001 | |
| 7817 chr1 manual_curation CDS 23457222 23457270 . + 2 Parent=GSCOCT00030024001 | |
| 7818 chr1 manual_curation CDS 23457340 23457399 . + 0 Parent=GSCOCT00030024001 | |
| 7819 chr1 manual_curation CDS 23458704 23458772 . + 0 Parent=GSCOCT00030024001 | |
| 7820 chr1 manual_curation CDS 23458982 23459065 . + 0 Parent=GSCOCT00030024001 | |
| 7821 chr1 manual_curation CDS 23459162 23459245 . + 0 Parent=GSCOCT00030024001 | |
| 7822 chr1 manual_curation CDS 23459505 23459590 . + 0 Parent=GSCOCT00030024001 | |
| 7823 chr1 manual_curation CDS 23461572 23461662 . + 2 Parent=GSCOCT00030024001 | |
| 7824 chr1 manual_curation CDS 23462649 23462729 . + 0 Parent=GSCOCT00030024001 | |
| 7825 chr1 manual_curation CDS 23462838 23462912 . + 0 Parent=GSCOCT00030024001 | |
| 7826 chr1 manual_curation CDS 23463002 23463139 . + 0 Parent=GSCOCT00030024001 | |
| 7827 chr1 manual_curation gene 23513590 23524450 . + . ID=GSCOCG00030025001;Name=Cc01_g06440 | |
| 7828 chr1 manual_curation mRNA 23513590 23524450 . + . ID=GSCOCT00030025001;Parent=GSCOCG00030025001;Name=Cc01_g06440 | |
| 7829 chr1 manual_curation polypeptide 23513765 23524084 . + . ID=GSCOCP00030025001;Dbxref=InterPro:IPR000432,InterPro:IPR005747,InterPro:IPR007696,PANTHER:PTHR11361,PFAM:PF00488,PIR:PIRSF005814,PROSITE:PS00486,SMART:SM00533,SMART:SM00534,SwissProt:A6QG46,SwissProt:A8Z1S5,SwissProt:P73625,TAIR:AT1G65070.2,TAIR:AT3G24320.1,TAIR:AT5G54090.1,TrEMBL:B9I2A9,TrEMBL:F6H7A2,TrEMBL:I1JH75;Derives_from=GSCOCT00030025001;Name=Cc01_g06440;Ontology_term=CC_evidence_code:ISS,GO:0003684,GO:0005524,GO:0006298,GO:0030983,GO:0045005,CC_EC_number:missing_EC_number,PRODUCT:Putative MutS2 protein,CC_functional_completeness:complete,CC_gene:mutSB,CC_gene:mutS2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030025001~ Putative MutS2 protein~ mutSB~ complete;original_location=join(621105..621449%2C621557..621682%2C621894..622061%2C622165..622248%2C622499..622549%2C623471..623527%2C623620..623702%2C624203..624326%2C624421..624480%2C625830..626072%2C626375..626455%2C626563..626710%2C627604..627731%2C628923..628970%2C629125..629255%2C629341..629423%2C629649..629752%2C630195..630265%2C630822..631126%2C631270..631424);owner=coffea | |
| 7830 chr1 manual_curation exon 23513590 23514109 . + . Parent=GSCOCT00030025001 | |
| 7831 chr1 manual_curation exon 23514217 23514342 . + . Parent=GSCOCT00030025001 | |
| 7832 chr1 manual_curation exon 23514554 23514721 . + . Parent=GSCOCT00030025001 | |
| 7833 chr1 manual_curation exon 23514825 23514908 . + . Parent=GSCOCT00030025001 | |
| 7834 chr1 manual_curation exon 23515159 23515209 . + . Parent=GSCOCT00030025001 | |
| 7835 chr1 manual_curation exon 23516131 23516187 . + . Parent=GSCOCT00030025001 | |
| 7836 chr1 manual_curation exon 23516280 23516362 . + . Parent=GSCOCT00030025001 | |
| 7837 chr1 manual_curation exon 23516863 23516986 . + . Parent=GSCOCT00030025001 | |
| 7838 chr1 manual_curation exon 23517081 23517140 . + . Parent=GSCOCT00030025001 | |
| 7839 chr1 manual_curation exon 23518490 23518732 . + . Parent=GSCOCT00030025001 | |
| 7840 chr1 manual_curation exon 23519035 23519115 . + . Parent=GSCOCT00030025001 | |
| 7841 chr1 manual_curation exon 23519223 23519370 . + . Parent=GSCOCT00030025001 | |
| 7842 chr1 manual_curation exon 23520264 23520391 . + . Parent=GSCOCT00030025001 | |
| 7843 chr1 manual_curation exon 23521583 23521630 . + . Parent=GSCOCT00030025001 | |
| 7844 chr1 manual_curation exon 23521785 23521915 . + . Parent=GSCOCT00030025001 | |
| 7845 chr1 manual_curation exon 23522001 23522083 . + . Parent=GSCOCT00030025001 | |
| 7846 chr1 manual_curation exon 23522309 23522412 . + . Parent=GSCOCT00030025001 | |
| 7847 chr1 manual_curation exon 23522855 23522925 . + . Parent=GSCOCT00030025001 | |
| 7848 chr1 manual_curation exon 23523482 23523786 . + . Parent=GSCOCT00030025001 | |
| 7849 chr1 manual_curation exon 23523930 23524450 . + . Parent=GSCOCT00030025001 | |
| 7850 chr1 manual_curation CDS 23513765 23514109 . + 0 Parent=GSCOCT00030025001 | |
| 7851 chr1 manual_curation CDS 23514217 23514342 . + 0 Parent=GSCOCT00030025001 | |
| 7852 chr1 manual_curation CDS 23514554 23514721 . + 0 Parent=GSCOCT00030025001 | |
| 7853 chr1 manual_curation CDS 23514825 23514908 . + 0 Parent=GSCOCT00030025001 | |
| 7854 chr1 manual_curation CDS 23515159 23515209 . + 0 Parent=GSCOCT00030025001 | |
| 7855 chr1 manual_curation CDS 23516131 23516187 . + 0 Parent=GSCOCT00030025001 | |
| 7856 chr1 manual_curation CDS 23516280 23516362 . + 0 Parent=GSCOCT00030025001 | |
| 7857 chr1 manual_curation CDS 23516863 23516986 . + 2 Parent=GSCOCT00030025001 | |
| 7858 chr1 manual_curation CDS 23517081 23517140 . + 0 Parent=GSCOCT00030025001 | |
| 7859 chr1 manual_curation CDS 23518490 23518732 . + 0 Parent=GSCOCT00030025001 | |
| 7860 chr1 manual_curation CDS 23519035 23519115 . + 0 Parent=GSCOCT00030025001 | |
| 7861 chr1 manual_curation CDS 23519223 23519370 . + 0 Parent=GSCOCT00030025001 | |
| 7862 chr1 manual_curation CDS 23520264 23520391 . + 1 Parent=GSCOCT00030025001 | |
| 7863 chr1 manual_curation CDS 23521583 23521630 . + 0 Parent=GSCOCT00030025001 | |
| 7864 chr1 manual_curation CDS 23521785 23521915 . + 0 Parent=GSCOCT00030025001 | |
| 7865 chr1 manual_curation CDS 23522001 23522083 . + 2 Parent=GSCOCT00030025001 | |
| 7866 chr1 manual_curation CDS 23522309 23522412 . + 1 Parent=GSCOCT00030025001 | |
| 7867 chr1 manual_curation CDS 23522855 23522925 . + 0 Parent=GSCOCT00030025001 | |
| 7868 chr1 manual_curation CDS 23523482 23523786 . + 2 Parent=GSCOCT00030025001 | |
| 7869 chr1 manual_curation CDS 23523930 23524084 . + 1 Parent=GSCOCT00030025001 | |
| 7870 chr1 manual_curation gene 23583280 23588165 . + . ID=GSCOCG00030029001;Name=Cc01_g06450 | |
| 7871 chr1 manual_curation mRNA 23583280 23588165 . + . ID=GSCOCT00030029001;Parent=GSCOCG00030029001;Name=Cc01_g06450 | |
| 7872 chr1 manual_curation polypeptide 23583280 23587958 . + . ID=GSCOCP00030029001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR002902,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF01657,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:O65468,SwissProt:Q8S9L6,SwissProt:Q9M0X5,TAIR:AT4G05200.1,TAIR:AT4G21410.1,TAIR:AT4G23160.1,TrEMBL:A5BPV0,TrEMBL:G7KDB1,TrEMBL:I1LEA4;Derives_from=GSCOCT00030029001;Name=Cc01_g06450;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Cysteine-rich receptor-like protein kinase 25,CC_functional_completeness:complete,CC_gene:CRK25,CC_gene:CRK29,CC_gene:CRK8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030029001~ Putative Cysteine-rich receptor-like protein kinase 25~ CRK25~ complete;original_location=join(690620..691445%2C691664..691795%2C692125..692246%2C692931..693141%2C693557..693794%2C694262..694412%2C694930..695298);owner=coffea | |
| 7873 chr1 manual_curation exon 23583280 23584105 . + . Parent=GSCOCT00030029001 | |
| 7874 chr1 manual_curation exon 23584324 23584455 . + . Parent=GSCOCT00030029001 | |
| 7875 chr1 manual_curation exon 23584785 23584906 . + . Parent=GSCOCT00030029001 | |
| 7876 chr1 manual_curation exon 23585591 23585801 . + . Parent=GSCOCT00030029001 | |
| 7877 chr1 manual_curation exon 23586217 23586454 . + . Parent=GSCOCT00030029001 | |
| 7878 chr1 manual_curation exon 23586922 23587072 . + . Parent=GSCOCT00030029001 | |
| 7879 chr1 manual_curation exon 23587590 23588165 . + . Parent=GSCOCT00030029001 | |
| 7880 chr1 manual_curation CDS 23583280 23584105 . + 0 Parent=GSCOCT00030029001 | |
| 7881 chr1 manual_curation CDS 23584324 23584455 . + 1 Parent=GSCOCT00030029001 | |
| 7882 chr1 manual_curation CDS 23584785 23584906 . + 1 Parent=GSCOCT00030029001 | |
| 7883 chr1 manual_curation CDS 23585591 23585801 . + 0 Parent=GSCOCT00030029001 | |
| 7884 chr1 manual_curation CDS 23586217 23586454 . + 1 Parent=GSCOCT00030029001 | |
| 7885 chr1 manual_curation CDS 23586922 23587072 . + 2 Parent=GSCOCT00030029001 | |
| 7886 chr1 manual_curation CDS 23587590 23587958 . + 0 Parent=GSCOCT00030029001 | |
| 7887 chr1 manual_curation gene 23589580 23596040 . + . ID=GSCOCG00030030001;Name=Cc01_g06460 | |
| 7888 chr1 manual_curation mRNA 23589580 23596040 . + . ID=GSCOCT00030030001;Parent=GSCOCG00030030001;Name=Cc01_g06460 | |
| 7889 chr1 manual_curation polypeptide 23589580 23596040 . + . ID=GSCOCP00030030001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR002902,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR020635,PFAM:PF01657,PFAM:PF07714,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q8GYA4,SwissProt:Q9M0X5,SwissProt:Q9T0J1,TAIR:AT4G05200.1,TAIR:AT4G23180.1,TAIR:AT4G38830.1,TrEMBL:A5BPV0,TrEMBL:B9H1T8,TrEMBL:I1NG74;Derives_from=GSCOCT00030030001;Name=Cc01_g06460;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Cysteine-rich receptor-like protein kinase 25,CC_functional_completeness:complete,CC_gene:CRK25,CC_gene:CRK10,CC_gene:CRK26;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030030001~ Putative Cysteine-rich receptor-like protein kinase 25~ CRK25~ complete;original_location=join(696920..697697%2C697832..697867%2C698362..698484%2C701612..701733%2C701912..702122%2C702298..702535%2C702745..702895%2C703015..703380);owner=coffea | |
| 7890 chr1 manual_curation exon 23589580 23590357 . + . Parent=GSCOCT00030030001 | |
| 7891 chr1 manual_curation exon 23590492 23590527 . + . Parent=GSCOCT00030030001 | |
| 7892 chr1 manual_curation exon 23591022 23591144 . + . Parent=GSCOCT00030030001 | |
| 7893 chr1 manual_curation exon 23594272 23594393 . + . Parent=GSCOCT00030030001 | |
| 7894 chr1 manual_curation exon 23594572 23594782 . + . Parent=GSCOCT00030030001 | |
| 7895 chr1 manual_curation exon 23594958 23595195 . + . Parent=GSCOCT00030030001 | |
| 7896 chr1 manual_curation exon 23595405 23595555 . + . Parent=GSCOCT00030030001 | |
| 7897 chr1 manual_curation exon 23595675 23596040 . + . Parent=GSCOCT00030030001 | |
| 7898 chr1 manual_curation CDS 23589580 23590357 . + 0 Parent=GSCOCT00030030001 | |
| 7899 chr1 manual_curation CDS 23590492 23590527 . + 1 Parent=GSCOCT00030030001 | |
| 7900 chr1 manual_curation CDS 23591022 23591144 . + 1 Parent=GSCOCT00030030001 | |
| 7901 chr1 manual_curation CDS 23594272 23594393 . + 1 Parent=GSCOCT00030030001 | |
| 7902 chr1 manual_curation CDS 23594572 23594782 . + 0 Parent=GSCOCT00030030001 | |
| 7903 chr1 manual_curation CDS 23594958 23595195 . + 1 Parent=GSCOCT00030030001 | |
| 7904 chr1 manual_curation CDS 23595405 23595555 . + 2 Parent=GSCOCT00030030001 | |
| 7905 chr1 manual_curation CDS 23595675 23596040 . + 0 Parent=GSCOCT00030030001 | |
| 7906 chr1 manual_curation gene 23596475 23600175 . - . ID=GSCOCG00030031001;Name=Cc01_g06470 | |
| 7907 chr1 manual_curation mRNA 23596475 23600175 . - . ID=GSCOCT00030031001;Parent=GSCOCG00030031001;Name=Cc01_g06470 | |
| 7908 chr1 manual_curation polypeptide 23596862 23598117 . - . ID=GSCOCP00030031001;Dbxref=TAIR:AT1G12830.1,TrEMBL:D7KPD4,TrEMBL:F6H442,TrEMBL:G7KW84;Derives_from=GSCOCT00030031001;Name=Cc01_g06470;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030031001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(705412..705457%2C704202..704827));owner=coffea | |
| 7909 chr1 manual_curation exon 23598529 23598698 . - . Parent=GSCOCT00030031001 | |
| 7910 chr1 manual_curation exon 23600020 23600175 . - . Parent=GSCOCT00030031001 | |
| 7911 chr1 manual_curation exon 23596475 23597487 . - . Parent=GSCOCT00030031001 | |
| 7912 chr1 manual_curation exon 23598072 23598151 . - . Parent=GSCOCT00030031001 | |
| 7913 chr1 manual_curation CDS 23596862 23597487 . - 1 Parent=GSCOCT00030031001 | |
| 7914 chr1 manual_curation CDS 23598072 23598117 . - 0 Parent=GSCOCT00030031001 | |
| 7915 chr1 manual_curation gene 23601411 23606435 . + . ID=GSCOCG00030032001;Name=Cc01_g06480 | |
| 7916 chr1 manual_curation mRNA 23601411 23606435 . + . ID=GSCOCT00030032001;Parent=GSCOCG00030032001;Name=Cc01_g06480 | |
| 7917 chr1 manual_curation polypeptide 23601694 23605087 . + . ID=GSCOCP00030032001;Dbxref=TAIR:AT3G20070.1,TrEMBL:B9HP08,TrEMBL:D7SNG7,TrEMBL:I1L9A8;Derives_from=GSCOCT00030032001;Name=Cc01_g06480;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative titan9,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030032001~ Putative titan9~ unknown_gene~ complete;original_location=join(709034..709081%2C709154..709223%2C710169..710253%2C710338..710399%2C710952..711259%2C711338..711380%2C711463..711582%2C712240..712427);owner=coffea | |
| 7918 chr1 manual_curation exon 23601411 23601741 . + . Parent=GSCOCT00030032001 | |
| 7919 chr1 manual_curation exon 23601814 23601883 . + . Parent=GSCOCT00030032001 | |
| 7920 chr1 manual_curation exon 23602829 23602913 . + . Parent=GSCOCT00030032001 | |
| 7921 chr1 manual_curation exon 23602998 23603059 . + . Parent=GSCOCT00030032001 | |
| 7922 chr1 manual_curation exon 23603612 23603919 . + . Parent=GSCOCT00030032001 | |
| 7923 chr1 manual_curation exon 23603998 23604040 . + . Parent=GSCOCT00030032001 | |
| 7924 chr1 manual_curation exon 23604123 23604242 . + . Parent=GSCOCT00030032001 | |
| 7925 chr1 manual_curation exon 23604900 23606435 . + . Parent=GSCOCT00030032001 | |
| 7926 chr1 manual_curation CDS 23601694 23601741 . + 0 Parent=GSCOCT00030032001 | |
| 7927 chr1 manual_curation CDS 23601814 23601883 . + 0 Parent=GSCOCT00030032001 | |
| 7928 chr1 manual_curation CDS 23602829 23602913 . + 1 Parent=GSCOCT00030032001 | |
| 7929 chr1 manual_curation CDS 23602998 23603059 . + 2 Parent=GSCOCT00030032001 | |
| 7930 chr1 manual_curation CDS 23603612 23603919 . + 1 Parent=GSCOCT00030032001 | |
| 7931 chr1 manual_curation CDS 23603998 23604040 . + 0 Parent=GSCOCT00030032001 | |
| 7932 chr1 manual_curation CDS 23604123 23604242 . + 1 Parent=GSCOCT00030032001 | |
| 7933 chr1 manual_curation CDS 23604900 23605087 . + 1 Parent=GSCOCT00030032001 | |
| 7934 chr1 manual_curation gene 23625175 23626688 . - . ID=GSCOCG00030034001;Name=Cc01_g06490 | |
| 7935 chr1 manual_curation mRNA 23625175 23626688 . - . ID=GSCOCT00030034001;Parent=GSCOCG00030034001;Name=Cc01_g06490 | |
| 7936 chr1 manual_curation polypeptide 23625175 23626688 . - . ID=GSCOCP00030034001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,SwissProt:Q9LTH2,SwissProt:Q9LTH3,SwissProt:Q9SNB1,TAIR:AT3G46670.1,TAIR:AT5G59580.1,TAIR:AT5G59590.1,TrEMBL:A5BH14,TrEMBL:A9PGJ3,TrEMBL:B9S398;Derives_from=GSCOCT00030034001;Name=Cc01_g06490;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:Putative UDP-glycosyltransferase 76E1,CC_functional_completeness:complete,CC_gene:UGT76E1,CC_gene:UGT76E2,CC_gene:UGT76E11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030034001~ Putative UDP-glycosyltransferase 76E1~ UGT76E1~ complete;original_location=complement(join(733545..734028%2C732515..733413));owner=coffea | |
| 7937 chr1 manual_curation exon 23625175 23626073 . - . Parent=GSCOCT00030034001 | |
| 7938 chr1 manual_curation exon 23626205 23626688 . - . Parent=GSCOCT00030034001 | |
| 7939 chr1 manual_curation CDS 23625175 23626073 . - 1 Parent=GSCOCT00030034001 | |
| 7940 chr1 manual_curation CDS 23626205 23626688 . - 0 Parent=GSCOCT00030034001 | |
| 7941 chr1 manual_curation gene 23640707 23641534 . + . ID=GSCOCG00030037001;Name=Cc01_g06500 | |
| 7942 chr1 manual_curation mRNA 23640707 23641534 . + . ID=GSCOCT00030037001;Parent=GSCOCG00030037001;Name=Cc01_g06500 | |
| 7943 chr1 manual_curation polypeptide 23640839 23641534 . + . ID=GSCOCP00030037001;Dbxref=InterPro:IPR003340,PFAM:PF02362,PROFILE:PS50863,SwissProt:Q851V5,SwissProt:Q8S2E6,TrEMBL:A5AT12,TrEMBL:A5B3C8,TrEMBL:F6HQF8;Derives_from=GSCOCT00030037001;Name=Cc01_g06500;Ontology_term=CC_evidence_code:ISS,GO:0003677,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:Os01g0723500,CC_gene:Os03g0621600;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030037001~ Putative uncharacterized protein~ Os01g0723500~ fragment;original_location=join(748179..748247%2C748485..748874);owner=coffea | |
| 7944 chr1 manual_curation exon 23640707 23640907 . + . Parent=GSCOCT00030037001 | |
| 7945 chr1 manual_curation exon 23641145 23641534 . + . Parent=GSCOCT00030037001 | |
| 7946 chr1 manual_curation CDS 23640839 23640907 . + 0 Parent=GSCOCT00030037001 | |
| 7947 chr1 manual_curation CDS 23641145 23641534 . + 0 Parent=GSCOCT00030037001 | |
| 7948 chr1 manual_curation gene 23642016 23642714 . - . ID=GSCOCG00030038001;Name=Cc01_g06510 | |
| 7949 chr1 manual_curation mRNA 23642016 23642714 . - . ID=GSCOCT00030038001;Parent=GSCOCG00030038001;Name=Cc01_g06510 | |
| 7950 chr1 manual_curation polypeptide 23642016 23642714 . - . ID=GSCOCP00030038001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,SwissProt:Q94AB5,SwissProt:Q9FI96,SwissProt:Q9FI99,TAIR:AT3G46660.1,TAIR:AT5G05870.1,TAIR:AT5G05900.1,TrEMBL:A9PGJ3,TrEMBL:B9HPA8,TrEMBL:B9S398;Derives_from=GSCOCT00030038001;Name=Cc01_g06510;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:UGT76C3,CC_gene:UGT76E12,CC_gene:UGT76C1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030038001~ Hypothetical protein~ UGT76C3~ missing_functional_completeness;original_location=complement(749356..750054);owner=coffea | |
| 7951 chr1 manual_curation exon 23642016 23642714 . - . Parent=GSCOCT00030038001 | |
| 7952 chr1 manual_curation CDS 23642016 23642714 . - 0 Parent=GSCOCT00030038001 | |
| 7953 chr1 manual_curation gene 23643738 23672699 . - . ID=GSCOCG00030039001;Name=Cc01_g06520 | |
| 7954 chr1 manual_curation mRNA 23643738 23672699 . - . ID=GSCOCT00030039001;Parent=GSCOCG00030039001;Name=Cc01_g06520 | |
| 7955 chr1 manual_curation polypeptide 23644167 23672699 . - . ID=GSCOCP00030039001;Dbxref=InterPro:IPR016024,SUPERFAMILY:SSF48371,SwissProt:Q5R6J0,SwissProt:Q5VYK3,SwissProt:Q6PDI5,TAIR:AT2G26780.1,TrEMBL:B9GG71,TrEMBL:F6HAC9,TrEMBL:I1M768;Derives_from=GSCOCT00030039001;Name=Cc01_g06520;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:Putative Proteasome-associated protein ECM29 homolog,CC_functional_completeness:complete,CC_gene:ECM29,CC_gene:Ecm29;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030039001~ Putative Proteasome-associated protein ECM29 homolog~ ECM29~ complete;original_location=complement(join(779824..780039%2C778789..778956%2C778595..778684%2C777999..778055%2C776395..776531%2C776220..776310%2C775997..776079%2C775712..775818%2C773936..774088%2C773097..773161%2C772658..772745%2C772479..772557%2C772283..772391%2C772148..772207%2C771921..772039%2C770050..770428%2C769724..769908%2C769547..769619%2C767951..768101%2C767680..767849%2C767202..767549%2C766650..766817%2C766276..766569%2C765827..766003%2C760881..761144%2C760064..760162%2C759738..759922%2C759019..759354%2C758346..758499%2C758079..758189%2C757209..757376%2C755195..755318%2C752747..752905%2C752556..752668%2C752409..752468%2C751507..751710));owner=coffea | |
| 7956 chr1 manual_curation exon 23643738 23644370 . - . Parent=GSCOCT00030039001 | |
| 7957 chr1 manual_curation exon 23645069 23645128 . - . Parent=GSCOCT00030039001 | |
| 7958 chr1 manual_curation exon 23645216 23645328 . - . Parent=GSCOCT00030039001 | |
| 7959 chr1 manual_curation exon 23645407 23645565 . - . Parent=GSCOCT00030039001 | |
| 7960 chr1 manual_curation exon 23647855 23647978 . - . Parent=GSCOCT00030039001 | |
| 7961 chr1 manual_curation exon 23649869 23650036 . - . Parent=GSCOCT00030039001 | |
| 7962 chr1 manual_curation exon 23650739 23650849 . - . Parent=GSCOCT00030039001 | |
| 7963 chr1 manual_curation exon 23651006 23651159 . - . Parent=GSCOCT00030039001 | |
| 7964 chr1 manual_curation exon 23651679 23652014 . - . Parent=GSCOCT00030039001 | |
| 7965 chr1 manual_curation exon 23652398 23652582 . - . Parent=GSCOCT00030039001 | |
| 7966 chr1 manual_curation exon 23652724 23652822 . - . Parent=GSCOCT00030039001 | |
| 7967 chr1 manual_curation exon 23653541 23653804 . - . Parent=GSCOCT00030039001 | |
| 7968 chr1 manual_curation exon 23658487 23658663 . - . Parent=GSCOCT00030039001 | |
| 7969 chr1 manual_curation exon 23658936 23659229 . - . Parent=GSCOCT00030039001 | |
| 7970 chr1 manual_curation exon 23659310 23659477 . - . Parent=GSCOCT00030039001 | |
| 7971 chr1 manual_curation exon 23659862 23660209 . - . Parent=GSCOCT00030039001 | |
| 7972 chr1 manual_curation exon 23660340 23660509 . - . Parent=GSCOCT00030039001 | |
| 7973 chr1 manual_curation exon 23660611 23660761 . - . Parent=GSCOCT00030039001 | |
| 7974 chr1 manual_curation exon 23662207 23662279 . - . Parent=GSCOCT00030039001 | |
| 7975 chr1 manual_curation exon 23662384 23662568 . - . Parent=GSCOCT00030039001 | |
| 7976 chr1 manual_curation exon 23662710 23663088 . - . Parent=GSCOCT00030039001 | |
| 7977 chr1 manual_curation exon 23664581 23664699 . - . Parent=GSCOCT00030039001 | |
| 7978 chr1 manual_curation exon 23664808 23664867 . - . Parent=GSCOCT00030039001 | |
| 7979 chr1 manual_curation exon 23664943 23665051 . - . Parent=GSCOCT00030039001 | |
| 7980 chr1 manual_curation exon 23665139 23665217 . - . Parent=GSCOCT00030039001 | |
| 7981 chr1 manual_curation exon 23665318 23665405 . - . Parent=GSCOCT00030039001 | |
| 7982 chr1 manual_curation exon 23665757 23665821 . - . Parent=GSCOCT00030039001 | |
| 7983 chr1 manual_curation exon 23666596 23666748 . - . Parent=GSCOCT00030039001 | |
| 7984 chr1 manual_curation exon 23668372 23668478 . - . Parent=GSCOCT00030039001 | |
| 7985 chr1 manual_curation exon 23668657 23668739 . - . Parent=GSCOCT00030039001 | |
| 7986 chr1 manual_curation exon 23668880 23668970 . - . Parent=GSCOCT00030039001 | |
| 7987 chr1 manual_curation exon 23669055 23669191 . - . Parent=GSCOCT00030039001 | |
| 7988 chr1 manual_curation exon 23670659 23670715 . - . Parent=GSCOCT00030039001 | |
| 7989 chr1 manual_curation exon 23671255 23671344 . - . Parent=GSCOCT00030039001 | |
| 7990 chr1 manual_curation exon 23671449 23671616 . - . Parent=GSCOCT00030039001 | |
| 7991 chr1 manual_curation exon 23672484 23672699 . - . Parent=GSCOCT00030039001 | |
| 7992 chr1 manual_curation CDS 23644167 23644370 . - 0 Parent=GSCOCT00030039001 | |
| 7993 chr1 manual_curation CDS 23645069 23645128 . - 0 Parent=GSCOCT00030039001 | |
| 7994 chr1 manual_curation CDS 23645216 23645328 . - 1 Parent=GSCOCT00030039001 | |
| 7995 chr1 manual_curation CDS 23645407 23645565 . - 1 Parent=GSCOCT00030039001 | |
| 7996 chr1 manual_curation CDS 23647855 23647978 . - 0 Parent=GSCOCT00030039001 | |
| 7997 chr1 manual_curation CDS 23649869 23650036 . - 0 Parent=GSCOCT00030039001 | |
| 7998 chr1 manual_curation CDS 23650739 23650849 . - 0 Parent=GSCOCT00030039001 | |
| 7999 chr1 manual_curation CDS 23651006 23651159 . - 2 Parent=GSCOCT00030039001 | |
| 8000 chr1 manual_curation CDS 23651679 23652014 . - 2 Parent=GSCOCT00030039001 | |
| 8001 chr1 manual_curation CDS 23652398 23652582 . - 0 Parent=GSCOCT00030039001 | |
| 8002 chr1 manual_curation CDS 23652724 23652822 . - 0 Parent=GSCOCT00030039001 | |
| 8003 chr1 manual_curation CDS 23653541 23653804 . - 0 Parent=GSCOCT00030039001 | |
| 8004 chr1 manual_curation CDS 23658487 23658663 . - 0 Parent=GSCOCT00030039001 | |
| 8005 chr1 manual_curation CDS 23658936 23659229 . - 0 Parent=GSCOCT00030039001 | |
| 8006 chr1 manual_curation CDS 23659310 23659477 . - 0 Parent=GSCOCT00030039001 | |
| 8007 chr1 manual_curation CDS 23659862 23660209 . - 0 Parent=GSCOCT00030039001 | |
| 8008 chr1 manual_curation CDS 23660340 23660509 . - 1 Parent=GSCOCT00030039001 | |
| 8009 chr1 manual_curation CDS 23660611 23660761 . - 0 Parent=GSCOCT00030039001 | |
| 8010 chr1 manual_curation CDS 23662207 23662279 . - 2 Parent=GSCOCT00030039001 | |
| 8011 chr1 manual_curation CDS 23662384 23662568 . - 0 Parent=GSCOCT00030039001 | |
| 8012 chr1 manual_curation CDS 23662710 23663088 . - 2 Parent=GSCOCT00030039001 | |
| 8013 chr1 manual_curation CDS 23664581 23664699 . - 0 Parent=GSCOCT00030039001 | |
| 8014 chr1 manual_curation CDS 23664808 23664867 . - 0 Parent=GSCOCT00030039001 | |
| 8015 chr1 manual_curation CDS 23664943 23665051 . - 2 Parent=GSCOCT00030039001 | |
| 8016 chr1 manual_curation CDS 23665139 23665217 . - 1 Parent=GSCOCT00030039001 | |
| 8017 chr1 manual_curation CDS 23665318 23665405 . - 0 Parent=GSCOCT00030039001 | |
| 8018 chr1 manual_curation CDS 23665757 23665821 . - 1 Parent=GSCOCT00030039001 | |
| 8019 chr1 manual_curation CDS 23666596 23666748 . - 1 Parent=GSCOCT00030039001 | |
| 8020 chr1 manual_curation CDS 23668372 23668478 . - 2 Parent=GSCOCT00030039001 | |
| 8021 chr1 manual_curation CDS 23668657 23668739 . - 0 Parent=GSCOCT00030039001 | |
| 8022 chr1 manual_curation CDS 23668880 23668970 . - 2 Parent=GSCOCT00030039001 | |
| 8023 chr1 manual_curation CDS 23669055 23669191 . - 0 Parent=GSCOCT00030039001 | |
| 8024 chr1 manual_curation CDS 23670659 23670715 . - 0 Parent=GSCOCT00030039001 | |
| 8025 chr1 manual_curation CDS 23671255 23671344 . - 0 Parent=GSCOCT00030039001 | |
| 8026 chr1 manual_curation CDS 23671449 23671616 . - 0 Parent=GSCOCT00030039001 | |
| 8027 chr1 manual_curation CDS 23672484 23672699 . - 0 Parent=GSCOCT00030039001 | |
| 8028 chr1 manual_curation gene 23681085 23683641 . - . ID=GSCOCG00030041001;Name=Cc01_g06530 | |
| 8029 chr1 manual_curation mRNA 23681085 23683641 . - . ID=GSCOCT00030041001;Parent=GSCOCG00030041001;Name=Cc01_g06530 | |
| 8030 chr1 manual_curation polypeptide 23681265 23683586 . - . ID=GSCOCP00030041001;Dbxref=GENE3D:G3DSA:2.60.40.420,InterPro:IPR003245,InterPro:IPR008972,PFAM:PF02298,SUPERFAMILY:SSF49503,TAIR:AT1G08500.1,TrEMBL:A5ASG1,TrEMBL:G7KCU0,TrEMBL:I1JIV1;Derives_from=GSCOCT00030041001;Name=Cc01_g06530;Ontology_term=CC_evidence_code:ISS,GO:0005507,GO:0009055,CC_EC_number:missing_EC_number,PRODUCT:Early nodulin-like protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030041001~ Early nodulin-like protein~ unknown_gene~ complete;original_location=complement(join(790665..790926%2C788605..789104));owner=coffea | |
| 8031 chr1 manual_curation exon 23681085 23681764 . - . Parent=GSCOCT00030041001 | |
| 8032 chr1 manual_curation exon 23683325 23683641 . - . Parent=GSCOCT00030041001 | |
| 8033 chr1 manual_curation CDS 23681265 23681764 . - 1 Parent=GSCOCT00030041001 | |
| 8034 chr1 manual_curation CDS 23683325 23683586 . - 0 Parent=GSCOCT00030041001 | |
| 8035 chr1 manual_curation gene 23706024 23707931 . + . ID=GSCOCG00030043001;Name=Cc01_g06540 | |
| 8036 chr1 manual_curation mRNA 23706024 23707931 . + . ID=GSCOCT00030043001;Parent=GSCOCG00030043001;Name=Cc01_g06540 | |
| 8037 chr1 manual_curation polypeptide 23706024 23707931 . + . ID=GSCOCP00030043001;Dbxref=InterPro:IPR000109,InterPro:IPR016196,PFAM:PF00854,SUPERFAMILY:SSF103473,SwissProt:Q8H157,SwissProt:Q8VYE4,SwissProt:Q93VV5,TAIR:AT1G27040.1,TAIR:AT1G59740.1,TAIR:AT1G69850.1,TrEMBL:F6I4I9,TrEMBL:I1NET2,TrEMBL:Q2HRU3;Derives_from=GSCOCT00030043001;Name=Cc01_g06540;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006857,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative Nitrate transporter 1.2,CC_functional_completeness:complete,CC_gene:NRT1.2,CC_gene:At1g59740,CC_gene:At1g27040;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030043001~ Putative Nitrate transporter 1.2~ NRT1.2~ complete;original_location=join(813364..813543%2C813633..814066%2C814169..814282%2C814401..815271);owner=coffea | |
| 8038 chr1 manual_curation exon 23706024 23706203 . + . Parent=GSCOCT00030043001 | |
| 8039 chr1 manual_curation exon 23706293 23706726 . + . Parent=GSCOCT00030043001 | |
| 8040 chr1 manual_curation exon 23706829 23706942 . + . Parent=GSCOCT00030043001 | |
| 8041 chr1 manual_curation exon 23707061 23707931 . + . Parent=GSCOCT00030043001 | |
| 8042 chr1 manual_curation CDS 23706024 23706203 . + 0 Parent=GSCOCT00030043001 | |
| 8043 chr1 manual_curation CDS 23706293 23706726 . + 0 Parent=GSCOCT00030043001 | |
| 8044 chr1 manual_curation CDS 23706829 23706942 . + 2 Parent=GSCOCT00030043001 | |
| 8045 chr1 manual_curation CDS 23707061 23707931 . + 2 Parent=GSCOCT00030043001 | |
| 8046 chr1 manual_curation gene 23715496 23723700 . + . ID=GSCOCG00030044001;Name=Cc01_g06550 | |
| 8047 chr1 manual_curation mRNA 23715496 23723700 . + . ID=GSCOCT00030044001;Parent=GSCOCG00030044001;Name=Cc01_g06550 | |
| 8048 chr1 manual_curation polypeptide 23715693 23722598 . + . ID=GSCOCP00030044001;Dbxref=InterPro:IPR018971,PFAM:PF09366,TAIR:AT4G31115.2,TAIR:AT5G04440.1,TrEMBL:B9S2X7,TrEMBL:D7SU78,TrEMBL:I1LKK9;Derives_from=GSCOCT00030044001;Name=Cc01_g06550;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF1997),CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030044001~ Protein of unknown function (DUF1997)~ unknown_gene~ fragment;original_location=join(823033..823100%2C823628..823852%2C825535..825643%2C826995..827040%2C827429..827514%2C828872..828930%2C829836..829938);owner=coffea | |
| 8049 chr1 manual_curation exon 23723201 23723700 . + . Parent=GSCOCT00030044001 | |
| 8050 chr1 manual_curation exon 23715496 23715760 . + . Parent=GSCOCT00030044001 | |
| 8051 chr1 manual_curation exon 23716288 23716512 . + . Parent=GSCOCT00030044001 | |
| 8052 chr1 manual_curation exon 23718195 23718303 . + . Parent=GSCOCT00030044001 | |
| 8053 chr1 manual_curation exon 23719655 23719700 . + . Parent=GSCOCT00030044001 | |
| 8054 chr1 manual_curation exon 23720089 23720174 . + . Parent=GSCOCT00030044001 | |
| 8055 chr1 manual_curation exon 23721532 23721590 . + . Parent=GSCOCT00030044001 | |
| 8056 chr1 manual_curation exon 23722496 23722661 . + . Parent=GSCOCT00030044001 | |
| 8057 chr1 manual_curation CDS 23715693 23715760 . + 0 Parent=GSCOCT00030044001 | |
| 8058 chr1 manual_curation CDS 23716288 23716512 . + 2 Parent=GSCOCT00030044001 | |
| 8059 chr1 manual_curation CDS 23718195 23718303 . + 2 Parent=GSCOCT00030044001 | |
| 8060 chr1 manual_curation CDS 23719655 23719700 . + 0 Parent=GSCOCT00030044001 | |
| 8061 chr1 manual_curation CDS 23720089 23720174 . + 1 Parent=GSCOCT00030044001 | |
| 8062 chr1 manual_curation CDS 23721532 23721590 . + 0 Parent=GSCOCT00030044001 | |
| 8063 chr1 manual_curation CDS 23722496 23722598 . + 2 Parent=GSCOCT00030044001 | |
| 8064 chr1 manual_curation gene 23725120 23730604 . - . ID=GSCOCG00030045001;Name=Cc01_g06560 | |
| 8065 chr1 manual_curation mRNA 23725120 23730604 . - . ID=GSCOCT00030045001;Parent=GSCOCG00030045001;Name=Cc01_g06560 | |
| 8066 chr1 manual_curation polypeptide 23725757 23728866 . - . ID=GSCOCP00030045001;Dbxref=InterPro:IPR007527,PROFILE:PS50966,TAIR:AT1G60560.1,TAIR:AT4G13970.1,TrEMBL:B9HES0,TrEMBL:I1M8W4,TrEMBL:I1N2H9;Derives_from=GSCOCT00030045001;Name=Cc01_g06560;Ontology_term=CC_evidence_code:ISS,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:SWIM zinc finger family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030045001~ SWIM zinc finger family protein~ unknown_gene~ complete;original_location=complement(join(835938..836206%2C834569..835220%2C834259..834495%2C833963..834203%2C833097..833884));owner=coffea | |
| 8067 chr1 manual_curation exon 23730516 23730604 . - . Parent=GSCOCT00030045001 | |
| 8068 chr1 manual_curation exon 23725120 23726544 . - . Parent=GSCOCT00030045001 | |
| 8069 chr1 manual_curation exon 23726623 23726863 . - . Parent=GSCOCT00030045001 | |
| 8070 chr1 manual_curation exon 23726919 23727155 . - . Parent=GSCOCT00030045001 | |
| 8071 chr1 manual_curation exon 23727229 23727880 . - . Parent=GSCOCT00030045001 | |
| 8072 chr1 manual_curation exon 23728598 23728914 . - . Parent=GSCOCT00030045001 | |
| 8073 chr1 manual_curation CDS 23725757 23726544 . - 1 Parent=GSCOCT00030045001 | |
| 8074 chr1 manual_curation CDS 23726623 23726863 . - 0 Parent=GSCOCT00030045001 | |
| 8075 chr1 manual_curation CDS 23726919 23727155 . - 0 Parent=GSCOCT00030045001 | |
| 8076 chr1 manual_curation CDS 23727229 23727880 . - 2 Parent=GSCOCT00030045001 | |
| 8077 chr1 manual_curation CDS 23728598 23728866 . - 0 Parent=GSCOCT00030045001 | |
| 8078 chr1 manual_curation gene 23734793 23735260 . + . ID=GSCOCG00030046001;Name=Cc01_g06570 | |
| 8079 chr1 manual_curation mRNA 23734793 23735260 . + . ID=GSCOCT00030046001;Parent=GSCOCG00030046001;Name=Cc01_g06570 | |
| 8080 chr1 manual_curation polypeptide 23734858 23735260 . + . ID=GSCOCP00030046001;Derives_from=GSCOCT00030046001;Name=Cc01_g06570;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030046001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(842198..842300%2C842542..842600);owner=coffea | |
| 8081 chr1 manual_curation exon 23734793 23734960 . + . Parent=GSCOCT00030046001 | |
| 8082 chr1 manual_curation exon 23735202 23735260 . + . Parent=GSCOCT00030046001 | |
| 8083 chr1 manual_curation CDS 23734858 23734960 . + 0 Parent=GSCOCT00030046001 | |
| 8084 chr1 manual_curation CDS 23735202 23735260 . + 1 Parent=GSCOCT00030046001 | |
| 8085 chr1 manual_curation gene 23735323 23736965 . + . ID=GSCOCG00030047001;Name=Cc01_g06580 | |
| 8086 chr1 manual_curation mRNA 23735323 23736965 . + . ID=GSCOCT00030047001;Parent=GSCOCG00030047001;Name=Cc01_g06580 | |
| 8087 chr1 manual_curation polypeptide 23735323 23736965 . + . ID=GSCOCP00030047001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q8L844,SwissProt:Q9M907,SwissProt:Q9SZ52,TAIR:AT3G06920.1,TAIR:AT4G31850.1,TAIR:AT5G42310.1,TIGRFAMs:TIGR00756,TrEMBL:B9RT56,TrEMBL:D7L610,TrEMBL:G7K4K1;Derives_from=GSCOCT00030047001;Name=Cc01_g06580;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Pentatricopeptide repeat-containing protein At3g06920,CC_functional_completeness:complete,CC_gene:At3g06920,CC_gene:PGR3,CC_gene:At5g42310;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030047001~ Putative Pentatricopeptide repeat-containing protein At3g06920~ At3g06920~ complete;original_location=join(842663..842687%2C842828..844305);owner=coffea | |
| 8088 chr1 manual_curation exon 23735323 23735347 . + . Parent=GSCOCT00030047001 | |
| 8089 chr1 manual_curation exon 23735488 23736965 . + . Parent=GSCOCT00030047001 | |
| 8090 chr1 manual_curation CDS 23735323 23735347 . + 0 Parent=GSCOCT00030047001 | |
| 8091 chr1 manual_curation CDS 23735488 23736965 . + 1 Parent=GSCOCT00030047001 | |
| 8092 chr1 manual_curation gene 23752096 23756473 . + . ID=GSCOCG00030049001;Name=Cc01_g06590 | |
| 8093 chr1 manual_curation mRNA 23752096 23756473 . + . ID=GSCOCT00030049001;Parent=GSCOCG00030049001;Name=Cc01_g06590 | |
| 8094 chr1 manual_curation polypeptide 23753374 23756126 . + . ID=GSCOCP00030049001;Dbxref=TAIR:AT2G24960.1,TAIR:AT4G02210.1,TAIR:AT4G02550.3,TrEMBL:A5B821,TrEMBL:B9RNU2,TrEMBL:I1KML0;Derives_from=GSCOCT00030049001;Name=Cc01_g06590;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030049001~ Putative unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2)%3B Has 1453 Blast hits to 509 proteins in 26 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 1%3B Fungi - 39%3B Plants - 1363%3B Viruses - 0%3B Other Eukaryotes - 50 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(860714..861061%2C861431..861916%2C862915..863466);owner=coffea | |
| 8095 chr1 manual_curation exon 23752096 23752196 . + . Parent=GSCOCT00030049001 | |
| 8096 chr1 manual_curation exon 23753346 23753721 . + . Parent=GSCOCT00030049001 | |
| 8097 chr1 manual_curation exon 23754091 23754576 . + . Parent=GSCOCT00030049001 | |
| 8098 chr1 manual_curation exon 23755575 23756473 . + . Parent=GSCOCT00030049001 | |
| 8099 chr1 manual_curation CDS 23753374 23753721 . + 0 Parent=GSCOCT00030049001 | |
| 8100 chr1 manual_curation CDS 23754091 23754576 . + 0 Parent=GSCOCT00030049001 | |
| 8101 chr1 manual_curation CDS 23755575 23756126 . + 0 Parent=GSCOCT00030049001 | |
| 8102 chr1 manual_curation gene 23757486 23760149 . + . ID=GSCOCG00030050001;Name=Cc01_g06600 | |
| 8103 chr1 manual_curation mRNA 23757486 23760149 . + . ID=GSCOCT00030050001;Parent=GSCOCG00030050001;Name=Cc01_g06600 | |
| 8104 chr1 manual_curation polypeptide 23757486 23759861 . + . ID=GSCOCP00030050001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q0WN60,SwissProt:Q7Y211,SwissProt:Q9STE1,TAIR:AT1G18485.1,TAIR:AT3G57430.1,TAIR:AT4G21300.1,TIGRFAMs:TIGR00756,TrEMBL:A5AIJ1,TrEMBL:B9HNJ4,TrEMBL:I1KMK9;Derives_from=GSCOCT00030050001;Name=Cc01_g06600;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Pentatricopeptide repeat-containing protein At1g18485,CC_functional_completeness:complete,CC_gene:PCMP-H8,CC_gene:PCMP-E36,CC_gene:PCMP-H81;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030050001~ Putative Pentatricopeptide repeat-containing protein At1g18485~ PCMP-H8~ complete;original_location=864826..867201;owner=coffea | |
| 8105 chr1 manual_curation exon 23757486 23760149 . + . Parent=GSCOCT00030050001 | |
| 8106 chr1 manual_curation CDS 23757486 23759861 . + 0 Parent=GSCOCT00030050001 | |
| 8107 chr1 manual_curation gene 23760455 23764914 . - . ID=GSCOCG00030051001;Name=Cc01_g06610 | |
| 8108 chr1 manual_curation mRNA 23760455 23764914 . - . ID=GSCOCT00030051001;Parent=GSCOCG00030051001;Name=Cc01_g06610 | |
| 8109 chr1 manual_curation polypeptide 23761483 23764914 . - . ID=GSCOCP00030051001;Dbxref=TAIR:AT5G12260.1,TAIR:AT5G60700.1,TrEMBL:B9GFS9,TrEMBL:B9HNJ5,TrEMBL:D7U230;Derives_from=GSCOCT00030051001;Name=Cc01_g06610;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030051001~ BEST Arabidopsis thaliana protein match is: glycosyltransferase family protein 2 (TAIR:AT5G60700.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(871579..872254%2C870033..870196%2C868823..869911));owner=coffea | |
| 8110 chr1 manual_curation exon 23760455 23762571 . - . Parent=GSCOCT00030051001 | |
| 8111 chr1 manual_curation exon 23762693 23762856 . - . Parent=GSCOCT00030051001 | |
| 8112 chr1 manual_curation exon 23764239 23764914 . - . Parent=GSCOCT00030051001 | |
| 8113 chr1 manual_curation CDS 23761483 23762571 . - 0 Parent=GSCOCT00030051001 | |
| 8114 chr1 manual_curation CDS 23762693 23762856 . - 1 Parent=GSCOCT00030051001 | |
| 8115 chr1 manual_curation CDS 23764239 23764914 . - 0 Parent=GSCOCT00030051001 | |
| 8116 chr1 manual_curation gene 23787884 23788428 . - . ID=GSCOCG00030052001;Name=Cc01_g06620 | |
| 8117 chr1 manual_curation mRNA 23787884 23788428 . - . ID=GSCOCT00030052001;Parent=GSCOCG00030052001;Name=Cc01_g06620 | |
| 8118 chr1 manual_curation polypeptide 23787884 23788396 . - . ID=GSCOCP00030052001;Derives_from=GSCOCT00030052001;Name=Cc01_g06620;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030052001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(895681..895736%2C895224..895596));owner=coffea | |
| 8119 chr1 manual_curation exon 23787884 23788256 . - . Parent=GSCOCT00030052001 | |
| 8120 chr1 manual_curation exon 23788341 23788428 . - . Parent=GSCOCT00030052001 | |
| 8121 chr1 manual_curation CDS 23787884 23788256 . - 2 Parent=GSCOCT00030052001 | |
| 8122 chr1 manual_curation CDS 23788341 23788396 . - 0 Parent=GSCOCT00030052001 | |
| 8123 chr1 manual_curation gene 23806616 23813599 . - . ID=GSCOCG00030058001;Name=Cc01_g06630 | |
| 8124 chr1 manual_curation mRNA 23806616 23813599 . - . ID=GSCOCT00030058001;Parent=GSCOCG00030058001;Name=Cc01_g06630 | |
| 8125 chr1 manual_curation polypeptide 23806944 23813599 . - . ID=GSCOCP00030058001;Dbxref=InterPro:IPR000825,InterPro:IPR010231,PFAM:PF01458,SwissProt:P48260,SwissProt:Q55790,SwissProt:Q9ZS97,TAIR:AT1G32500.1,TAIR:AT4G04770.1,TAIR:AT5G44316.1,TIGRFAMs:TIGR01980,TrEMBL:A5BEJ2,TrEMBL:B9RXM8,TrEMBL:Q58IU5;Derives_from=GSCOCT00030058001;Name=Cc01_g06630;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0016226,CC_EC_number:missing_EC_number,PRODUCT:UPF0051 protein ABCI8%2C chloroplastic,CC_functional_completeness:complete,CC_gene:ABCI8,CC_gene:ycf24,CC_gene:slr0074;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030058001~ UPF0051 protein ABCI8%2C chloroplastic~ ABCI8~ complete;original_location=complement(join(919494..920939%2C914284..914502));owner=coffea | |
| 8126 chr1 manual_curation exon 23806616 23807162 . - . Parent=GSCOCT00030058001 | |
| 8127 chr1 manual_curation exon 23812154 23813599 . - . Parent=GSCOCT00030058001 | |
| 8128 chr1 manual_curation CDS 23806944 23807162 . - 0 Parent=GSCOCT00030058001 | |
| 8129 chr1 manual_curation CDS 23812154 23813599 . - 0 Parent=GSCOCT00030058001 | |
| 8130 chr1 manual_curation gene 23816713 23818755 . - . ID=GSCOCG00030060001;Name=Cc01_g06640 | |
| 8131 chr1 manual_curation mRNA 23816713 23818755 . - . ID=GSCOCT00030060001;Parent=GSCOCG00030060001;Name=Cc01_g06640 | |
| 8132 chr1 manual_curation polypeptide 23816713 23818755 . - . ID=GSCOCP00030060001;Dbxref=InterPro:IPR005202,PFAM:PF03514,PROFILE:PS50985,SwissProt:P0C883,SwissProt:Q9LTI5,SwissProt:Q9XE58,TAIR:AT1G07530.1,TAIR:AT2G29060.1,TAIR:AT5G59450.1,TrEMBL:B9T680,TrEMBL:F6GUZ9,TrEMBL:Q00LP5;Derives_from=GSCOCT00030060001;Name=Cc01_g06640;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Scarecrow-like protein 33,CC_functional_completeness:complete,CC_gene:SCL33,CC_gene:SCL14,CC_gene:SCL11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030060001~ Putative Scarecrow-like protein 33~ SCL33~ complete;original_location=complement(924053..926095);owner=coffea | |
| 8133 chr1 manual_curation exon 23816713 23818755 . - . Parent=GSCOCT00030060001 | |
| 8134 chr1 manual_curation CDS 23816713 23818755 . - 0 Parent=GSCOCT00030060001 | |
| 8135 chr1 manual_curation gene 23820822 23823111 . - . ID=GSCOCG00030062001;Name=Cc01_g06650 | |
| 8136 chr1 manual_curation mRNA 23820822 23823111 . - . ID=GSCOCT00030062001;Parent=GSCOCG00030062001;Name=Cc01_g06650 | |
| 8137 chr1 manual_curation polypeptide 23820822 23823111 . - . ID=GSCOCP00030062001;Dbxref=InterPro:IPR005202,PFAM:PF03514,PROFILE:PS50985,SwissProt:Q9LTI5,SwissProt:Q9SNB8,SwissProt:Q9XE58,TAIR:AT1G07530.1,TAIR:AT3G46600.1,TAIR:AT5G59450.1,TrEMBL:I1LQP2,TrEMBL:Q00LP5,TrEMBL:Q1PCS0;Derives_from=GSCOCT00030062001;Name=Cc01_g06650;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Scarecrow-like protein 30,CC_functional_completeness:complete,CC_gene:SCL30,CC_gene:SCL14,CC_gene:SCL11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030062001~ Putative Scarecrow-like protein 30~ SCL30~ complete;original_location=complement(join(930124..930451%2C929190..929663%2C928845..929087%2C928162..928751));owner=coffea | |
| 8138 chr1 manual_curation exon 23820822 23821411 . - . Parent=GSCOCT00030062001 | |
| 8139 chr1 manual_curation exon 23821505 23821747 . - . Parent=GSCOCT00030062001 | |
| 8140 chr1 manual_curation exon 23821850 23822323 . - . Parent=GSCOCT00030062001 | |
| 8141 chr1 manual_curation exon 23822784 23823111 . - . Parent=GSCOCT00030062001 | |
| 8142 chr1 manual_curation CDS 23820822 23821411 . - 1 Parent=GSCOCT00030062001 | |
| 8143 chr1 manual_curation CDS 23821505 23821747 . - 1 Parent=GSCOCT00030062001 | |
| 8144 chr1 manual_curation CDS 23821850 23822323 . - 1 Parent=GSCOCT00030062001 | |
| 8145 chr1 manual_curation CDS 23822784 23823111 . - 0 Parent=GSCOCT00030062001 | |
| 8146 chr1 manual_curation gene 23829585 23832058 . - . ID=GSCOCG00030064001;Name=Cc01_g06660 | |
| 8147 chr1 manual_curation mRNA 23829585 23832058 . - . ID=GSCOCT00030064001;Parent=GSCOCG00030064001;Name=Cc01_g06660 | |
| 8148 chr1 manual_curation polypeptide 23829585 23832058 . - . ID=GSCOCP00030064001;Dbxref=InterPro:IPR001611,PFAM:PF00560,SwissProt:O49545,SwissProt:O82318,SwissProt:Q9LHP4,TAIR:AT2G25790.1,TAIR:AT2G34930.1,TAIR:AT3G24240.1,TrEMBL:B9SGD8,TrEMBL:C6ZS04,TrEMBL:I1MPQ7;Derives_from=GSCOCT00030064001;Name=Cc01_g06660;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790,CC_functional_completeness:complete,CC_gene:At2g25790,CC_gene:RCH2,CC_gene:BAM1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030064001~ Putative Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790~ At2g25790~ complete;original_location=complement(join(939274..939398%2C938886..939171%2C938385..938620%2C938043..938196%2C936925..937209));owner=coffea | |
| 8149 chr1 manual_curation exon 23829585 23829869 . - . Parent=GSCOCT00030064001 | |
| 8150 chr1 manual_curation exon 23830703 23830856 . - . Parent=GSCOCT00030064001 | |
| 8151 chr1 manual_curation exon 23831045 23831280 . - . Parent=GSCOCT00030064001 | |
| 8152 chr1 manual_curation exon 23831546 23831831 . - . Parent=GSCOCT00030064001 | |
| 8153 chr1 manual_curation exon 23831934 23832058 . - . Parent=GSCOCT00030064001 | |
| 8154 chr1 manual_curation CDS 23829585 23829869 . - 0 Parent=GSCOCT00030064001 | |
| 8155 chr1 manual_curation CDS 23830703 23830856 . - 2 Parent=GSCOCT00030064001 | |
| 8156 chr1 manual_curation CDS 23831045 23831280 . - 0 Parent=GSCOCT00030064001 | |
| 8157 chr1 manual_curation CDS 23831546 23831831 . - 2 Parent=GSCOCT00030064001 | |
| 8158 chr1 manual_curation CDS 23831934 23832058 . - 0 Parent=GSCOCT00030064001 | |
| 8159 chr1 manual_curation gene 23839609 23853774 . + . ID=GSCOCG00030065001;Name=Cc01_g06670 | |
| 8160 chr1 manual_curation mRNA 23839609 23853774 . + . ID=GSCOCT00030065001;Parent=GSCOCG00030065001;Name=Cc01_g06670 | |
| 8161 chr1 manual_curation polypeptide 23840354 23853404 . + . ID=GSCOCP00030065001;Dbxref=TAIR:AT2G26770.1,TAIR:AT2G40820.1,TAIR:AT3G56480.1,TrEMBL:B9HNJ6,TrEMBL:B9SB74,TrEMBL:F6HAG4;Derives_from=GSCOCT00030065001;Name=Cc01_g06670;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:plectin-related,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030065001~ plectin-related~ unknown_gene~ complete;original_location=join(947694..947975%2C948567..948695%2C950479..950571%2C951976..952116%2C953192..953260%2C954367..954450%2C955315..955486%2C956852..956968%2C957153..957211%2C959070..959204%2C960448..960597%2C960700..960744);owner=coffea | |
| 8162 chr1 manual_curation exon 23839609 23839722 . + . Parent=GSCOCT00030065001 | |
| 8163 chr1 manual_curation exon 23840341 23840635 . + . Parent=GSCOCT00030065001 | |
| 8164 chr1 manual_curation exon 23841227 23841355 . + . Parent=GSCOCT00030065001 | |
| 8165 chr1 manual_curation exon 23843139 23843231 . + . Parent=GSCOCT00030065001 | |
| 8166 chr1 manual_curation exon 23844636 23844776 . + . Parent=GSCOCT00030065001 | |
| 8167 chr1 manual_curation exon 23845852 23845920 . + . Parent=GSCOCT00030065001 | |
| 8168 chr1 manual_curation exon 23847027 23847110 . + . Parent=GSCOCT00030065001 | |
| 8169 chr1 manual_curation exon 23847975 23848146 . + . Parent=GSCOCT00030065001 | |
| 8170 chr1 manual_curation exon 23849512 23849628 . + . Parent=GSCOCT00030065001 | |
| 8171 chr1 manual_curation exon 23849813 23849871 . + . Parent=GSCOCT00030065001 | |
| 8172 chr1 manual_curation exon 23851730 23851864 . + . Parent=GSCOCT00030065001 | |
| 8173 chr1 manual_curation exon 23853108 23853257 . + . Parent=GSCOCT00030065001 | |
| 8174 chr1 manual_curation exon 23853360 23853774 . + . Parent=GSCOCT00030065001 | |
| 8175 chr1 manual_curation CDS 23840354 23840635 . + 0 Parent=GSCOCT00030065001 | |
| 8176 chr1 manual_curation CDS 23841227 23841355 . + 0 Parent=GSCOCT00030065001 | |
| 8177 chr1 manual_curation CDS 23843139 23843231 . + 0 Parent=GSCOCT00030065001 | |
| 8178 chr1 manual_curation CDS 23844636 23844776 . + 0 Parent=GSCOCT00030065001 | |
| 8179 chr1 manual_curation CDS 23845852 23845920 . + 0 Parent=GSCOCT00030065001 | |
| 8180 chr1 manual_curation CDS 23847027 23847110 . + 0 Parent=GSCOCT00030065001 | |
| 8181 chr1 manual_curation CDS 23847975 23848146 . + 0 Parent=GSCOCT00030065001 | |
| 8182 chr1 manual_curation CDS 23849512 23849628 . + 1 Parent=GSCOCT00030065001 | |
| 8183 chr1 manual_curation CDS 23849813 23849871 . + 1 Parent=GSCOCT00030065001 | |
| 8184 chr1 manual_curation CDS 23851730 23851864 . + 0 Parent=GSCOCT00030065001 | |
| 8185 chr1 manual_curation CDS 23853108 23853257 . + 0 Parent=GSCOCT00030065001 | |
| 8186 chr1 manual_curation CDS 23853360 23853404 . + 0 Parent=GSCOCT00030065001 | |
| 8187 chr1 manual_curation gene 23869627 23873808 . + . ID=GSCOCG00030066001;Name=Cc01_g06680 | |
| 8188 chr1 manual_curation mRNA 23869627 23873808 . + . ID=GSCOCT00030066001;Parent=GSCOCG00030066001;Name=Cc01_g06680 | |
| 8189 chr1 manual_curation polypeptide 23869764 23873478 . + . ID=GSCOCP00030066001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR020635,PFAM:PF07714,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:O49839,SwissProt:O49840,SwissProt:Q06548,TAIR:AT1G14370.1,TAIR:AT1G26970.1,TAIR:AT2G02800.1,TrEMBL:F6H9Y4,TrEMBL:G7K7R3,TrEMBL:I1M792;Derives_from=GSCOCT00030066001;Name=Cc01_g06680;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.10.2,PRODUCT:Protein kinase APK1A%2C chloroplastic,CC_functional_completeness:complete,CC_gene:APK2B,CC_gene:APK2A,CC_gene:APK1A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030066001~ Protein kinase APK1A%2C chloroplastic~ APK2B~ complete;original_location=join(977104..977164%2C978130..978455%2C978552..978687%2C979429..979565%2C979664..979787%2C980400..980818);owner=coffea | |
| 8190 chr1 manual_curation exon 23869627 23869824 . + . Parent=GSCOCT00030066001 | |
| 8191 chr1 manual_curation exon 23870790 23871115 . + . Parent=GSCOCT00030066001 | |
| 8192 chr1 manual_curation exon 23871212 23871347 . + . Parent=GSCOCT00030066001 | |
| 8193 chr1 manual_curation exon 23872089 23872225 . + . Parent=GSCOCT00030066001 | |
| 8194 chr1 manual_curation exon 23872324 23872447 . + . Parent=GSCOCT00030066001 | |
| 8195 chr1 manual_curation exon 23873060 23873808 . + . Parent=GSCOCT00030066001 | |
| 8196 chr1 manual_curation CDS 23869764 23869824 . + 0 Parent=GSCOCT00030066001 | |
| 8197 chr1 manual_curation CDS 23870790 23871115 . + 1 Parent=GSCOCT00030066001 | |
| 8198 chr1 manual_curation CDS 23871212 23871347 . + 0 Parent=GSCOCT00030066001 | |
| 8199 chr1 manual_curation CDS 23872089 23872225 . + 1 Parent=GSCOCT00030066001 | |
| 8200 chr1 manual_curation CDS 23872324 23872447 . + 0 Parent=GSCOCT00030066001 | |
| 8201 chr1 manual_curation CDS 23873060 23873478 . + 1 Parent=GSCOCT00030066001 | |
| 8202 chr1 manual_curation gene 23874362 23884483 . - . ID=GSCOCG00030067001;Name=Cc01_g06690 | |
| 8203 chr1 manual_curation mRNA 23874362 23884483 . - . ID=GSCOCT00030067001;Parent=GSCOCG00030067001;Name=Cc01_g06690 | |
| 8204 chr1 manual_curation polypeptide 23874723 23882899 . - . ID=GSCOCP00030067001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR004041,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR018451,InterPro:IPR020635,InterPro:IPR020636,InterPro:IPR020660,PANTHER:PTHR22982,PANTHER:PTHR22982:SF45,PFAM:PF00069,PFAM:PF03822,PROFILE:PS50011,PROFILE:PS50816,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q2QY53,SwissProt:Q2RAX3,SwissProt:Q2V452,TAIR:AT1G30270.1,TAIR:AT2G26980.4,TAIR:AT5G21326.1,TrEMBL:A5BQA6,TrEMBL:C4P7W7;Derives_from=GSCOCT00030067001;Name=Cc01_g06690;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,GO:0007165,CC_EC_number:2.7.11.17,PRODUCT:CBL-interacting protein kinase 32,CC_functional_completeness:complete,CC_gene:CIPK32,CC_gene:CIPK3,CC_gene:CIPK33;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030067001~ CBL-interacting protein kinase 32~ CIPK32~ complete;original_location=complement(join(990069..990239%2C989700..989762%2C989443..989514%2C989085..989192%2C988889..988969%2C987811..987864%2C987595..987720%2C987419..987508%2C984732..984854%2C984518..984622%2C983383..983496%2C983178..983234%2C983013..983087%2C982063..982134));owner=coffea | |
| 8205 chr1 manual_curation exon 23874362 23874794 . - . Parent=GSCOCT00030067001 | |
| 8206 chr1 manual_curation exon 23875673 23875747 . - . Parent=GSCOCT00030067001 | |
| 8207 chr1 manual_curation exon 23875838 23875894 . - . Parent=GSCOCT00030067001 | |
| 8208 chr1 manual_curation exon 23876043 23876156 . - . Parent=GSCOCT00030067001 | |
| 8209 chr1 manual_curation exon 23877178 23877282 . - . Parent=GSCOCT00030067001 | |
| 8210 chr1 manual_curation exon 23877392 23877514 . - . Parent=GSCOCT00030067001 | |
| 8211 chr1 manual_curation exon 23880079 23880168 . - . Parent=GSCOCT00030067001 | |
| 8212 chr1 manual_curation exon 23880255 23880380 . - . Parent=GSCOCT00030067001 | |
| 8213 chr1 manual_curation exon 23880471 23880524 . - . Parent=GSCOCT00030067001 | |
| 8214 chr1 manual_curation exon 23881549 23881629 . - . Parent=GSCOCT00030067001 | |
| 8215 chr1 manual_curation exon 23881745 23881852 . - . Parent=GSCOCT00030067001 | |
| 8216 chr1 manual_curation exon 23882103 23882174 . - . Parent=GSCOCT00030067001 | |
| 8217 chr1 manual_curation exon 23882360 23882422 . - . Parent=GSCOCT00030067001 | |
| 8218 chr1 manual_curation exon 23882729 23884483 . - . Parent=GSCOCT00030067001 | |
| 8219 chr1 manual_curation CDS 23874723 23874794 . - 0 Parent=GSCOCT00030067001 | |
| 8220 chr1 manual_curation CDS 23875673 23875747 . - 0 Parent=GSCOCT00030067001 | |
| 8221 chr1 manual_curation CDS 23875838 23875894 . - 0 Parent=GSCOCT00030067001 | |
| 8222 chr1 manual_curation CDS 23876043 23876156 . - 0 Parent=GSCOCT00030067001 | |
| 8223 chr1 manual_curation CDS 23877178 23877282 . - 0 Parent=GSCOCT00030067001 | |
| 8224 chr1 manual_curation CDS 23877392 23877514 . - 0 Parent=GSCOCT00030067001 | |
| 8225 chr1 manual_curation CDS 23880079 23880168 . - 0 Parent=GSCOCT00030067001 | |
| 8226 chr1 manual_curation CDS 23880255 23880380 . - 0 Parent=GSCOCT00030067001 | |
| 8227 chr1 manual_curation CDS 23880471 23880524 . - 0 Parent=GSCOCT00030067001 | |
| 8228 chr1 manual_curation CDS 23881549 23881629 . - 0 Parent=GSCOCT00030067001 | |
| 8229 chr1 manual_curation CDS 23881745 23881852 . - 0 Parent=GSCOCT00030067001 | |
| 8230 chr1 manual_curation CDS 23882103 23882174 . - 0 Parent=GSCOCT00030067001 | |
| 8231 chr1 manual_curation CDS 23882360 23882422 . - 0 Parent=GSCOCT00030067001 | |
| 8232 chr1 manual_curation CDS 23882729 23882899 . - 0 Parent=GSCOCT00030067001 | |
| 8233 chr1 manual_curation gene 23994079 24001783 . - . ID=GSCOCG00030068001;Name=Cc01_g06700 | |
| 8234 chr1 manual_curation mRNA 23994079 24001783 . - . ID=GSCOCT00030068001;Parent=GSCOCG00030068001;Name=Cc01_g06700 | |
| 8235 chr1 manual_curation polypeptide 23994240 24000509 . - . ID=GSCOCP00030068001;Dbxref=InterPro:IPR009472,PFAM:PF06485,TAIR:AT3G08010.1,TrEMBL:D7L740,TrEMBL:F6HBA5,TrEMBL:Q9SFB3;Derives_from=GSCOCT00030068001;Name=Cc01_g06700;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:RNA binding,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030068001~ RNA binding~ unknown_gene~ complete;original_location=complement(join(1107359..1107849%2C1107178..1107247%2C1104592..1104763%2C1103677..1103820%2C1101580..1101839));owner=coffea | |
| 8236 chr1 manual_curation exon 24001673 24001783 . - . Parent=GSCOCT00030068001 | |
| 8237 chr1 manual_curation exon 23994079 23994499 . - . Parent=GSCOCT00030068001 | |
| 8238 chr1 manual_curation exon 23996337 23996480 . - . Parent=GSCOCT00030068001 | |
| 8239 chr1 manual_curation exon 23997252 23997423 . - . Parent=GSCOCT00030068001 | |
| 8240 chr1 manual_curation exon 23999838 23999907 . - . Parent=GSCOCT00030068001 | |
| 8241 chr1 manual_curation exon 24000019 24000729 . - . Parent=GSCOCT00030068001 | |
| 8242 chr1 manual_curation CDS 23994240 23994499 . - 1 Parent=GSCOCT00030068001 | |
| 8243 chr1 manual_curation CDS 23996337 23996480 . - 1 Parent=GSCOCT00030068001 | |
| 8244 chr1 manual_curation CDS 23997252 23997423 . - 0 Parent=GSCOCT00030068001 | |
| 8245 chr1 manual_curation CDS 23999838 23999907 . - 2 Parent=GSCOCT00030068001 | |
| 8246 chr1 manual_curation CDS 24000019 24000509 . - 0 Parent=GSCOCT00030068001 | |
| 8247 chr1 manual_curation gene 24005827 24006545 . - . ID=GSCOCG00030069001;Name=Cc01_g06710 | |
| 8248 chr1 manual_curation mRNA 24005827 24006545 . - . ID=GSCOCT00030069001;Parent=GSCOCG00030069001;Name=Cc01_g06710 | |
| 8249 chr1 manual_curation polypeptide 24005827 24006545 . - . ID=GSCOCP00030069001;Dbxref=GENE3D:G3DSA:3.30.160.20,InterPro:IPR001159,InterPro:IPR014720,PFAM:PF00035,PROFILE:PS50137,SMART:SM00358,SwissProt:O04492,SwissProt:Q0DJA3,SwissProt:Q0IQN6,TAIR:AT1G09700.1,TAIR:AT2G28380.1,TAIR:AT3G26932.1,TrEMBL:B9GV44,TrEMBL:B9T2K0,TrEMBL:D7TSR3;Derives_from=GSCOCT00030069001;Name=Cc01_g06710;Ontology_term=CC_evidence_code:ISS,GO:0003723,GO:0003725,GO:0005622,CC_EC_number:3.1.26.3,PRODUCT:Putative Double-stranded RNA-binding protein 3,CC_functional_completeness:fragment,CC_gene:DRB3,CC_gene:DRB8,CC_gene:DRB1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030069001~ Putative Double-stranded RNA-binding protein 3~ DRB3~ fragment;original_location=complement(join(1113640..1113885%2C1113167..1113292));owner=coffea | |
| 8250 chr1 manual_curation exon 24005827 24005952 . - . Parent=GSCOCT00030069001 | |
| 8251 chr1 manual_curation exon 24006300 24006545 . - . Parent=GSCOCT00030069001 | |
| 8252 chr1 manual_curation CDS 24005827 24005952 . - 0 Parent=GSCOCT00030069001 | |
| 8253 chr1 manual_curation CDS 24006300 24006545 . - 0 Parent=GSCOCT00030069001 | |
| 8254 chr1 manual_curation gene 24020145 24025982 . - . ID=GSCOCG00030070001;Name=Cc01_g06720 | |
| 8255 chr1 manual_curation mRNA 24020145 24025982 . - . ID=GSCOCT00030070001;Parent=GSCOCG00030070001;Name=Cc01_g06720 | |
| 8256 chr1 manual_curation polypeptide 24020145 24025721 . - . ID=GSCOCP00030070001;Dbxref=GENE3D:G3DSA:2.60.40.420,InterPro:IPR001117,InterPro:IPR002355,InterPro:IPR008972,InterPro:IPR011706,InterPro:IPR011707,InterPro:IPR017760,PFAM:PF00394,PFAM:PF07731,PFAM:PF07732,PROSITE:PS00079,PROSITE:PS00080,SUPERFAMILY:SSF49503,SwissProt:P24792,SwissProt:P37064,SwissProt:Q40588,TAIR:AT4G39830.1,TAIR:AT5G21100.1,TAIR:AT5G21105.1,TIGRFAMs:TIGR03388,TrEMBL:A5AGG0,TrEMBL:B9HQ45,TrEMBL:F6HA36;Derives_from=GSCOCT00030070001;Name=Cc01_g06720;Ontology_term=CC_evidence_code:ISS,GO:0005507,GO:0005576,GO:0008447,GO:0016491,GO:0055114,CC_EC_number:1.10.3.3,CC_EC_number:1.10.3.3,PRODUCT:L-ascorbate oxidase,CC_functional_completeness:complete,CC_gene:AAO;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030070001~ L-ascorbate oxidase~ AAO~ complete;original_location=complement(join(1132900..1133061%2C1132653..1132745%2C1132004..1132216%2C1131069..1131266%2C1127485..1128444));owner=coffea | |
| 8257 chr1 manual_curation exon 24020145 24021104 . - . Parent=GSCOCT00030070001 | |
| 8258 chr1 manual_curation exon 24023729 24023926 . - . Parent=GSCOCT00030070001 | |
| 8259 chr1 manual_curation exon 24024664 24024876 . - . Parent=GSCOCT00030070001 | |
| 8260 chr1 manual_curation exon 24025313 24025405 . - . Parent=GSCOCT00030070001 | |
| 8261 chr1 manual_curation exon 24025560 24025982 . - . Parent=GSCOCT00030070001 | |
| 8262 chr1 manual_curation CDS 24020145 24021104 . - 0 Parent=GSCOCT00030070001 | |
| 8263 chr1 manual_curation CDS 24023729 24023926 . - 0 Parent=GSCOCT00030070001 | |
| 8264 chr1 manual_curation CDS 24024664 24024876 . - 0 Parent=GSCOCT00030070001 | |
| 8265 chr1 manual_curation CDS 24025313 24025405 . - 0 Parent=GSCOCT00030070001 | |
| 8266 chr1 manual_curation CDS 24025560 24025721 . - 0 Parent=GSCOCT00030070001 | |
| 8267 chr1 manual_curation gene 24038977 24045046 . + . ID=GSCOCG00030072001;Name=Cc01_g06730 | |
| 8268 chr1 manual_curation mRNA 24038977 24045046 . + . ID=GSCOCT00030072001;Parent=GSCOCG00030072001;Name=Cc01_g06730 | |
| 8269 chr1 manual_curation polypeptide 24038977 24044178 . + . ID=GSCOCP00030072001;Dbxref=InterPro:IPR019273,PFAM:PF10058,SwissProt:Q28HF6,SwissProt:Q6PFM4,SwissProt:Q9ZQ34,TAIR:AT2G24330.1,TAIR:AT4G31080.2,TrEMBL:B9N6F1,TrEMBL:B9SPU2,TrEMBL:D7U3Y5;Derives_from=GSCOCT00030072001;Name=Cc01_g06730;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein lunapark,CC_functional_completeness:modules,CC_gene:At2g24330,CC_gene:lnp,CC_gene:lnpb;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030072001~ Putative Protein lunapark~ At2g24330~ modules;original_location=join(1146317..1146401%2C1146474..1146688%2C1147371..1147637%2C1149437..1149581%2C1150427..1150536%2C1150743..1151166%2C1151247..1151518);owner=coffea | |
| 8270 chr1 manual_curation exon 24038977 24039061 . + . Parent=GSCOCT00030072001 | |
| 8271 chr1 manual_curation exon 24039134 24039348 . + . Parent=GSCOCT00030072001 | |
| 8272 chr1 manual_curation exon 24040031 24040297 . + . Parent=GSCOCT00030072001 | |
| 8273 chr1 manual_curation exon 24042097 24042241 . + . Parent=GSCOCT00030072001 | |
| 8274 chr1 manual_curation exon 24043087 24043196 . + . Parent=GSCOCT00030072001 | |
| 8275 chr1 manual_curation exon 24043403 24043826 . + . Parent=GSCOCT00030072001 | |
| 8276 chr1 manual_curation exon 24043907 24045046 . + . Parent=GSCOCT00030072001 | |
| 8277 chr1 manual_curation CDS 24038977 24039061 . + 0 Parent=GSCOCT00030072001 | |
| 8278 chr1 manual_curation CDS 24039134 24039348 . + 1 Parent=GSCOCT00030072001 | |
| 8279 chr1 manual_curation CDS 24040031 24040297 . + 0 Parent=GSCOCT00030072001 | |
| 8280 chr1 manual_curation CDS 24042097 24042241 . + 0 Parent=GSCOCT00030072001 | |
| 8281 chr1 manual_curation CDS 24043087 24043196 . + 1 Parent=GSCOCT00030072001 | |
| 8282 chr1 manual_curation CDS 24043403 24043826 . + 0 Parent=GSCOCT00030072001 | |
| 8283 chr1 manual_curation CDS 24043907 24044178 . + 1 Parent=GSCOCT00030072001 | |
| 8284 chr1 manual_curation gene 24049152 24057576 . + . ID=GSCOCG00030073001;Name=Cc01_g06740 | |
| 8285 chr1 manual_curation mRNA 24049152 24057576 . + . ID=GSCOCT00030073001;Parent=GSCOCG00030073001;Name=Cc01_g06740 | |
| 8286 chr1 manual_curation polypeptide 24049340 24057179 . + . ID=GSCOCP00030073001;Dbxref=GENE3D:G3DSA:3.40.630.30,InterPro:IPR000182,InterPro:IPR016181,InterPro:IPR022610,PFAM:PF00583,PROFILE:PS51186,SUPERFAMILY:SSF55729,TAIR:AT2G06025.1,TAIR:AT4G28030.1,TrEMBL:D7L9D2,TrEMBL:D7T1F0,TrEMBL:Q8GUT5;Derives_from=GSCOCT00030073001;Name=Cc01_g06740;Ontology_term=CC_evidence_code:ISS,GO:0008080,GO:0008152,CC_EC_number:missing_EC_number,PRODUCT:Putative Acyl-CoA N-acyltransferases (NAT) superfamily protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030073001~ Putative Acyl-CoA N-acyltransferases (NAT) superfamily protein~ unknown_gene~ modules;original_location=join(1156680..1156819%2C1158592..1158814%2C1158927..1158979%2C1159153..1159189%2C1160211..1160282%2C1162897..1163001%2C1163366..1163522%2C1163661..1163737%2C1164454..1164519);owner=coffea | |
| 8287 chr1 manual_curation exon 24049152 24049479 . + . Parent=GSCOCT00030073001 | |
| 8288 chr1 manual_curation exon 24051252 24051474 . + . Parent=GSCOCT00030073001 | |
| 8289 chr1 manual_curation exon 24051587 24051639 . + . Parent=GSCOCT00030073001 | |
| 8290 chr1 manual_curation exon 24051813 24051849 . + . Parent=GSCOCT00030073001 | |
| 8291 chr1 manual_curation exon 24052871 24052942 . + . Parent=GSCOCT00030073001 | |
| 8292 chr1 manual_curation exon 24055557 24055661 . + . Parent=GSCOCT00030073001 | |
| 8293 chr1 manual_curation exon 24056026 24056182 . + . Parent=GSCOCT00030073001 | |
| 8294 chr1 manual_curation exon 24056321 24056397 . + . Parent=GSCOCT00030073001 | |
| 8295 chr1 manual_curation exon 24057114 24057576 . + . Parent=GSCOCT00030073001 | |
| 8296 chr1 manual_curation CDS 24049340 24049479 . + 0 Parent=GSCOCT00030073001 | |
| 8297 chr1 manual_curation CDS 24051252 24051474 . + 2 Parent=GSCOCT00030073001 | |
| 8298 chr1 manual_curation CDS 24051587 24051639 . + 0 Parent=GSCOCT00030073001 | |
| 8299 chr1 manual_curation CDS 24051813 24051849 . + 2 Parent=GSCOCT00030073001 | |
| 8300 chr1 manual_curation CDS 24052871 24052942 . + 0 Parent=GSCOCT00030073001 | |
| 8301 chr1 manual_curation CDS 24055557 24055661 . + 0 Parent=GSCOCT00030073001 | |
| 8302 chr1 manual_curation CDS 24056026 24056182 . + 0 Parent=GSCOCT00030073001 | |
| 8303 chr1 manual_curation CDS 24056321 24056397 . + 1 Parent=GSCOCT00030073001 | |
| 8304 chr1 manual_curation CDS 24057114 24057179 . + 0 Parent=GSCOCT00030073001 | |
| 8305 chr1 manual_curation gene 24085057 24092690 . + . ID=GSCOCG00030074001;Name=Cc01_g06750 | |
| 8306 chr1 manual_curation mRNA 24085057 24092690 . + . ID=GSCOCT00030074001;Parent=GSCOCG00030074001;Name=Cc01_g06750 | |
| 8307 chr1 manual_curation polypeptide 24085482 24092261 . + . ID=GSCOCP00030074001;Dbxref=InterPro:IPR006828,PFAM:PF04739,SwissProt:O43741,SwissProt:Q84VQ1,SwissProt:Q9SCY5,TAIR:AT2G28060.1,TAIR:AT4G16360.3,TAIR:AT5G21170.2,TrEMBL:G4XQK6,TrEMBL:Q38JJ5,TrEMBL:Q9ST66;Derives_from=GSCOCT00030074001;Name=Cc01_g06750;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:SNF1-related protein kinase regulatory subunit beta-1,CC_functional_completeness:complete,CC_gene:KINB1,CC_gene:KINB2,CC_gene:PRKAB2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030074001~ SNF1-related protein kinase regulatory subunit beta-1~ KINB1~ complete;original_location=join(1192822..1193022%2C1195784..1195959%2C1196097..1196259%2C1199278..1199601);owner=coffea | |
| 8308 chr1 manual_curation exon 24085057 24085682 . + . Parent=GSCOCT00030074001 | |
| 8309 chr1 manual_curation exon 24088444 24088619 . + . Parent=GSCOCT00030074001 | |
| 8310 chr1 manual_curation exon 24088757 24088919 . + . Parent=GSCOCT00030074001 | |
| 8311 chr1 manual_curation exon 24091938 24092690 . + . Parent=GSCOCT00030074001 | |
| 8312 chr1 manual_curation CDS 24085482 24085682 . + 0 Parent=GSCOCT00030074001 | |
| 8313 chr1 manual_curation CDS 24088444 24088619 . + 0 Parent=GSCOCT00030074001 | |
| 8314 chr1 manual_curation CDS 24088757 24088919 . + 2 Parent=GSCOCT00030074001 | |
| 8315 chr1 manual_curation CDS 24091938 24092261 . + 0 Parent=GSCOCT00030074001 | |
| 8316 chr1 manual_curation gene 24098562 24102130 . + . ID=GSCOCG00030076001;Name=Cc01_g06760 | |
| 8317 chr1 manual_curation mRNA 24098562 24102130 . + . ID=GSCOCT00030076001;Parent=GSCOCG00030076001;Name=Cc01_g06760 | |
| 8318 chr1 manual_curation polypeptide 24098818 24101080 . + . ID=GSCOCP00030076001;Dbxref=InterPro:IPR002938,InterPro:IPR003042,PFAM:PF01494,PRINTS:PR00420,SwissProt:P86491,SwissProt:Q9F131,SwissProt:Q9FGC7,TAIR:AT2G35660.1,TAIR:AT4G38540.1,TAIR:AT5G05320.1,TrEMBL:B9P630,TrEMBL:F6H0E9,TrEMBL:Q8H9C4;Derives_from=GSCOCT00030076001;Name=Cc01_g06760;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0008152,GO:0016491,GO:0055114,CC_EC_number:1.14.13.1,PRODUCT:Putative 3-hydroxybenzoate 6-hydroxylase 1,CC_functional_completeness:complete,CC_gene:xlnD,CC_gene:ZEP;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030076001~ Putative 3-hydroxybenzoate 6-hydroxylase 1~ xlnD~ complete;original_location=join(1206158..1206231%2C1206376..1206522%2C1206662..1206727%2C1207064..1207229%2C1207416..1207647%2C1207861..1208420);owner=coffea | |
| 8319 chr1 manual_curation exon 24098562 24098891 . + . Parent=GSCOCT00030076001 | |
| 8320 chr1 manual_curation exon 24099036 24099182 . + . Parent=GSCOCT00030076001 | |
| 8321 chr1 manual_curation exon 24099322 24099387 . + . Parent=GSCOCT00030076001 | |
| 8322 chr1 manual_curation exon 24099724 24099889 . + . Parent=GSCOCT00030076001 | |
| 8323 chr1 manual_curation exon 24100076 24100307 . + . Parent=GSCOCT00030076001 | |
| 8324 chr1 manual_curation exon 24100521 24102130 . + . Parent=GSCOCT00030076001 | |
| 8325 chr1 manual_curation CDS 24098818 24098891 . + 0 Parent=GSCOCT00030076001 | |
| 8326 chr1 manual_curation CDS 24099036 24099182 . + 2 Parent=GSCOCT00030076001 | |
| 8327 chr1 manual_curation CDS 24099322 24099387 . + 2 Parent=GSCOCT00030076001 | |
| 8328 chr1 manual_curation CDS 24099724 24099889 . + 2 Parent=GSCOCT00030076001 | |
| 8329 chr1 manual_curation CDS 24100076 24100307 . + 0 Parent=GSCOCT00030076001 | |
| 8330 chr1 manual_curation CDS 24100521 24101080 . + 1 Parent=GSCOCT00030076001 | |
| 8331 chr1 manual_curation gene 24106554 24108821 . - . ID=GSCOCG00030078001;Name=Cc01_g06770 | |
| 8332 chr1 manual_curation mRNA 24106554 24108821 . - . ID=GSCOCT00030078001;Parent=GSCOCG00030078001;Name=Cc01_g06770 | |
| 8333 chr1 manual_curation polypeptide 24106976 24108720 . - . ID=GSCOCP00030078001;Dbxref=GENE3D:G3DSA:1.10.238.10,InterPro:IPR002048,InterPro:IPR011992,InterPro:IPR018247,InterPro:IPR018248,InterPro:IPR018249,PFAM:PF00036,PROFILE:PS50222,PROSITE:PS00018,SMART:SM00054,SwissProt:P62201,SwissProt:Q7Y052,TAIR:AT2G27030.3,TAIR:AT3G43810.1,TAIR:AT5G21274.1,TrEMBL:G0WPB7,TrEMBL:Q71SN1,TrEMBL:Q76MF3;Derives_from=GSCOCT00030078001;Name=Cc01_g06770;Ontology_term=CC_evidence_code:ISS,GO:0005509,CC_EC_number:1.6.3.1,PRODUCT:Calmodulin,CC_functional_completeness:complete,CC_gene:CAM53;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030078001~ Calmodulin~ CAM53~ complete;original_location=complement(join(1215985..1216060%2C1214316..1214689));owner=coffea | |
| 8334 chr1 manual_curation exon 24106554 24107349 . - . Parent=GSCOCT00030078001 | |
| 8335 chr1 manual_curation exon 24108645 24108821 . - . Parent=GSCOCT00030078001 | |
| 8336 chr1 manual_curation CDS 24106976 24107349 . - 1 Parent=GSCOCT00030078001 | |
| 8337 chr1 manual_curation CDS 24108645 24108720 . - 0 Parent=GSCOCT00030078001 | |
| 8338 chr1 manual_curation gene 24120504 24130660 . + . ID=GSCOCG00030079001;Name=Cc01_g06780 | |
| 8339 chr1 manual_curation mRNA 24120504 24130660 . + . ID=GSCOCT00030079001;Parent=GSCOCG00030079001;Name=Cc01_g06780 | |
| 8340 chr1 manual_curation polypeptide 24122477 24129690 . + . ID=GSCOCP00030079001;Dbxref=InterPro:IPR003100,InterPro:IPR003165,InterPro:IPR012337,InterPro:IPR014811,PFAM:PF02170,PFAM:PF02171,PFAM:PF08699,PROFILE:PS50821,PROFILE:PS50822,SUPERFAMILY:SSF53098,SwissProt:Q0JF58,SwissProt:Q9SDG8,SwissProt:Q9ZVD5,TAIR:AT2G27040.1,TAIR:AT5G21030.1,TAIR:AT5G21150.1,TrEMBL:D5FQ91,TrEMBL:D7T1K2,TrEMBL:Q2LFC1;Derives_from=GSCOCT00030079001;Name=Cc01_g06780;Ontology_term=CC_evidence_code:ISS,GO:0003676,CC_EC_number:missing_EC_number,PRODUCT:Protein argonaute 4,CC_functional_completeness:complete,CC_gene:AGO4,CC_gene:AGO4A,CC_gene:AGO4B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030079001~ Protein argonaute 4~ AGO4~ complete;original_location=join(1229817..1229921%2C1230015..1230220%2C1230294..1230518%2C1230613..1230749%2C1230842..1230939%2C1231026..1231123%2C1231312..1231480%2C1231558..1231674%2C1231755..1231862%2C1231983..1232045%2C1232156..1232269%2C1232355..1232520%2C1232638..1232750%2C1232867..1233004%2C1233294..1233424%2C1234118..1234183%2C1235201..1235264%2C1235358..1235469%2C1235546..1235619%2C1236419..1236513%2C1236605..1236636%2C1236855..1237030);owner=coffea | |
| 8341 chr1 manual_curation exon 24120504 24120636 . + . Parent=GSCOCT00030079001 | |
| 8342 chr1 manual_curation exon 24122316 24122581 . + . Parent=GSCOCT00030079001 | |
| 8343 chr1 manual_curation exon 24122675 24122880 . + . Parent=GSCOCT00030079001 | |
| 8344 chr1 manual_curation exon 24122954 24123178 . + . Parent=GSCOCT00030079001 | |
| 8345 chr1 manual_curation exon 24123273 24123409 . + . Parent=GSCOCT00030079001 | |
| 8346 chr1 manual_curation exon 24123502 24123599 . + . Parent=GSCOCT00030079001 | |
| 8347 chr1 manual_curation exon 24123686 24123783 . + . Parent=GSCOCT00030079001 | |
| 8348 chr1 manual_curation exon 24123972 24124140 . + . Parent=GSCOCT00030079001 | |
| 8349 chr1 manual_curation exon 24124218 24124334 . + . Parent=GSCOCT00030079001 | |
| 8350 chr1 manual_curation exon 24124415 24124522 . + . Parent=GSCOCT00030079001 | |
| 8351 chr1 manual_curation exon 24124643 24124705 . + . Parent=GSCOCT00030079001 | |
| 8352 chr1 manual_curation exon 24124816 24124929 . + . Parent=GSCOCT00030079001 | |
| 8353 chr1 manual_curation exon 24125015 24125180 . + . Parent=GSCOCT00030079001 | |
| 8354 chr1 manual_curation exon 24125298 24125410 . + . Parent=GSCOCT00030079001 | |
| 8355 chr1 manual_curation exon 24125527 24125664 . + . Parent=GSCOCT00030079001 | |
| 8356 chr1 manual_curation exon 24125954 24126084 . + . Parent=GSCOCT00030079001 | |
| 8357 chr1 manual_curation exon 24126778 24126843 . + . Parent=GSCOCT00030079001 | |
| 8358 chr1 manual_curation exon 24127861 24127924 . + . Parent=GSCOCT00030079001 | |
| 8359 chr1 manual_curation exon 24128018 24128129 . + . Parent=GSCOCT00030079001 | |
| 8360 chr1 manual_curation exon 24128206 24128279 . + . Parent=GSCOCT00030079001 | |
| 8361 chr1 manual_curation exon 24129079 24129173 . + . Parent=GSCOCT00030079001 | |
| 8362 chr1 manual_curation exon 24129265 24129296 . + . Parent=GSCOCT00030079001 | |
| 8363 chr1 manual_curation exon 24129515 24130660 . + . Parent=GSCOCT00030079001 | |
| 8364 chr1 manual_curation CDS 24122477 24122581 . + 0 Parent=GSCOCT00030079001 | |
| 8365 chr1 manual_curation CDS 24122675 24122880 . + 0 Parent=GSCOCT00030079001 | |
| 8366 chr1 manual_curation CDS 24122954 24123178 . + 2 Parent=GSCOCT00030079001 | |
| 8367 chr1 manual_curation CDS 24123273 24123409 . + 2 Parent=GSCOCT00030079001 | |
| 8368 chr1 manual_curation CDS 24123502 24123599 . + 1 Parent=GSCOCT00030079001 | |
| 8369 chr1 manual_curation CDS 24123686 24123783 . + 0 Parent=GSCOCT00030079001 | |
| 8370 chr1 manual_curation CDS 24123972 24124140 . + 2 Parent=GSCOCT00030079001 | |
| 8371 chr1 manual_curation CDS 24124218 24124334 . + 0 Parent=GSCOCT00030079001 | |
| 8372 chr1 manual_curation CDS 24124415 24124522 . + 0 Parent=GSCOCT00030079001 | |
| 8373 chr1 manual_curation CDS 24124643 24124705 . + 0 Parent=GSCOCT00030079001 | |
| 8374 chr1 manual_curation CDS 24124816 24124929 . + 0 Parent=GSCOCT00030079001 | |
| 8375 chr1 manual_curation CDS 24125015 24125180 . + 0 Parent=GSCOCT00030079001 | |
| 8376 chr1 manual_curation CDS 24125298 24125410 . + 1 Parent=GSCOCT00030079001 | |
| 8377 chr1 manual_curation CDS 24125527 24125664 . + 0 Parent=GSCOCT00030079001 | |
| 8378 chr1 manual_curation CDS 24125954 24126084 . + 0 Parent=GSCOCT00030079001 | |
| 8379 chr1 manual_curation CDS 24126778 24126843 . + 2 Parent=GSCOCT00030079001 | |
| 8380 chr1 manual_curation CDS 24127861 24127924 . + 2 Parent=GSCOCT00030079001 | |
| 8381 chr1 manual_curation CDS 24128018 24128129 . + 0 Parent=GSCOCT00030079001 | |
| 8382 chr1 manual_curation CDS 24128206 24128279 . + 1 Parent=GSCOCT00030079001 | |
| 8383 chr1 manual_curation CDS 24129079 24129173 . + 0 Parent=GSCOCT00030079001 | |
| 8384 chr1 manual_curation CDS 24129265 24129296 . + 2 Parent=GSCOCT00030079001 | |
| 8385 chr1 manual_curation CDS 24129515 24129690 . + 1 Parent=GSCOCT00030079001 | |
| 8386 chr1 manual_curation gene 24132805 24133523 . + . ID=GSCOCG00030080001;Name=Cc01_g06790 | |
| 8387 chr1 manual_curation mRNA 24132805 24133523 . + . ID=GSCOCT00030080001;Parent=GSCOCG00030080001;Name=Cc01_g06790 | |
| 8388 chr1 manual_curation polypeptide 24132805 24133523 . + . ID=GSCOCP00030080001;Dbxref=SwissProt:Q3E984,SwissProt:Q9SDG8,SwissProt:Q9ZVD5,TAIR:AT2G27040.1,TAIR:AT5G21030.1,TAIR:AT5G21150.1,TrEMBL:D7T1K2,TrEMBL:Q2LFC1,TrEMBL:Q2LFC2;Derives_from=GSCOCT00030080001;Name=Cc01_g06790;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:AGO4,CC_gene:AGO4A,CC_gene:AGO8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030080001~ Hypothetical protein~ AGO4~ missing_functional_completeness;original_location=join(1240145..1240316%2C1240796..1240863);owner=coffea | |
| 8389 chr1 manual_curation exon 24132805 24132976 . + . Parent=GSCOCT00030080001 | |
| 8390 chr1 manual_curation exon 24133456 24133523 . + . Parent=GSCOCT00030080001 | |
| 8391 chr1 manual_curation CDS 24132805 24132976 . + 0 Parent=GSCOCT00030080001 | |
| 8392 chr1 manual_curation CDS 24133456 24133523 . + 1 Parent=GSCOCT00030080001 | |
| 8393 chr1 manual_curation gene 24163815 24164191 . + . ID=GSCOCG00030081001;Name=Cc01_g06800 | |
| 8394 chr1 manual_curation mRNA 24163815 24164191 . + . ID=GSCOCT00030081001;Parent=GSCOCG00030081001;Name=Cc01_g06800 | |
| 8395 chr1 manual_curation polypeptide 24163815 24164191 . + . ID=GSCOCP00030081001;Dbxref=TAIR:AT3G48480.1,TrEMBL:B9HYH3,TrEMBL:B9IF57,TrEMBL:Q6L4B6;Derives_from=GSCOCT00030081001;Name=Cc01_g06800;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Cysteine proteinases superfamily protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030081001~ Putative Cysteine proteinases superfamily protein~ unknown_gene~ fragment;original_location=join(1271155..1271372%2C1271459..1271531);owner=coffea | |
| 8396 chr1 manual_curation exon 24163815 24164032 . + . Parent=GSCOCT00030081001 | |
| 8397 chr1 manual_curation exon 24164119 24164191 . + . Parent=GSCOCT00030081001 | |
| 8398 chr1 manual_curation CDS 24163815 24164032 . + 0 Parent=GSCOCT00030081001 | |
| 8399 chr1 manual_curation CDS 24164119 24164191 . + 2 Parent=GSCOCT00030081001 | |
| 8400 chr1 manual_curation gene 24164359 24164822 . + . ID=GSCOCG00030082001;Name=Cc01_g06810 | |
| 8401 chr1 manual_curation mRNA 24164359 24164822 . + . ID=GSCOCT00030082001;Parent=GSCOCG00030082001;Name=Cc01_g06810 | |
| 8402 chr1 manual_curation polypeptide 24164359 24164822 . + . ID=GSCOCP00030082001;Dbxref=TAIR:AT3G48480.1,TrEMBL:D7SHA6,TrEMBL:I1JXG7,TrEMBL:Q6L4B6;Derives_from=GSCOCT00030082001;Name=Cc01_g06810;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Cysteine proteinases superfamily protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030082001~ Putative Cysteine proteinases superfamily protein~ unknown_gene~ fragment;original_location=join(1271699..1271773%2C1271873..1271986%2C1272070..1272162);owner=coffea | |
| 8403 chr1 manual_curation exon 24164359 24164433 . + . Parent=GSCOCT00030082001 | |
| 8404 chr1 manual_curation exon 24164533 24164646 . + . Parent=GSCOCT00030082001 | |
| 8405 chr1 manual_curation exon 24164730 24164822 . + . Parent=GSCOCT00030082001 | |
| 8406 chr1 manual_curation CDS 24164359 24164433 . + 0 Parent=GSCOCT00030082001 | |
| 8407 chr1 manual_curation CDS 24164533 24164646 . + 0 Parent=GSCOCT00030082001 | |
| 8408 chr1 manual_curation CDS 24164730 24164822 . + 0 Parent=GSCOCT00030082001 | |
| 8409 chr1 manual_curation gene 24168075 24170384 . - . ID=GSCOCG00030084001;Name=Cc01_g06820 | |
| 8410 chr1 manual_curation mRNA 24168075 24170384 . - . ID=GSCOCT00030084001;Parent=GSCOCG00030084001;Name=Cc01_g06820 | |
| 8411 chr1 manual_curation polypeptide 24168075 24170384 . - . ID=GSCOCP00030084001;Dbxref=InterPro:IPR004598,PANTHER:PTHR13152,TAIR:AT4G17020.3,TrEMBL:A5BMX1,TrEMBL:B9H2W7,TrEMBL:D7MC99;Derives_from=GSCOCT00030084001;Name=Cc01_g06820;Ontology_term=CC_evidence_code:ISS,GO:0003702,GO:0005634,GO:0006281,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030084001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1277684..1277724%2C1275853..1275937%2C1275663..1275743%2C1275415..1275573));owner=coffea | |
| 8412 chr1 manual_curation exon 24168075 24168233 . - . Parent=GSCOCT00030084001 | |
| 8413 chr1 manual_curation exon 24168323 24168403 . - . Parent=GSCOCT00030084001 | |
| 8414 chr1 manual_curation exon 24168513 24168597 . - . Parent=GSCOCT00030084001 | |
| 8415 chr1 manual_curation exon 24170344 24170384 . - . Parent=GSCOCT00030084001 | |
| 8416 chr1 manual_curation CDS 24168075 24168233 . - 0 Parent=GSCOCT00030084001 | |
| 8417 chr1 manual_curation CDS 24168323 24168403 . - 0 Parent=GSCOCT00030084001 | |
| 8418 chr1 manual_curation CDS 24168513 24168597 . - 2 Parent=GSCOCT00030084001 | |
| 8419 chr1 manual_curation CDS 24170344 24170384 . - 0 Parent=GSCOCT00030084001 | |
| 8420 chr1 manual_curation gene 24170839 24173326 . + . ID=GSCOCG00030085001;Name=Cc01_g06830 | |
| 8421 chr1 manual_curation mRNA 24170839 24173326 . + . ID=GSCOCT00030085001;Parent=GSCOCG00030085001;Name=Cc01_g06830 | |
| 8422 chr1 manual_curation polypeptide 24170839 24173326 . + . ID=GSCOCP00030085001;Dbxref=TAIR:AT1G43722.1,TAIR:AT5G41980.1,TrEMBL:A2ZTW0,TrEMBL:B9FC79,TrEMBL:Q7XLZ2;Derives_from=GSCOCT00030085001;Name=Cc01_g06830;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030085001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=join(1278179..1278466%2C1278575..1278686%2C1278896..1278988%2C1279242..1279251%2C1279584..1279694%2C1279828..1279930%2C1280019..1280666);owner=coffea | |
| 8423 chr1 manual_curation exon 24170839 24171126 . + . Parent=GSCOCT00030085001 | |
| 8424 chr1 manual_curation exon 24171235 24171346 . + . Parent=GSCOCT00030085001 | |
| 8425 chr1 manual_curation exon 24171556 24171648 . + . Parent=GSCOCT00030085001 | |
| 8426 chr1 manual_curation exon 24171902 24171911 . + . Parent=GSCOCT00030085001 | |
| 8427 chr1 manual_curation exon 24172244 24172354 . + . Parent=GSCOCT00030085001 | |
| 8428 chr1 manual_curation exon 24172488 24172590 . + . Parent=GSCOCT00030085001 | |
| 8429 chr1 manual_curation exon 24172679 24173326 . + . Parent=GSCOCT00030085001 | |
| 8430 chr1 manual_curation CDS 24170839 24171126 . + 0 Parent=GSCOCT00030085001 | |
| 8431 chr1 manual_curation CDS 24171235 24171346 . + 0 Parent=GSCOCT00030085001 | |
| 8432 chr1 manual_curation CDS 24171556 24171648 . + 1 Parent=GSCOCT00030085001 | |
| 8433 chr1 manual_curation CDS 24171902 24171911 . + 1 Parent=GSCOCT00030085001 | |
| 8434 chr1 manual_curation CDS 24172244 24172354 . + 2 Parent=GSCOCT00030085001 | |
| 8435 chr1 manual_curation CDS 24172488 24172590 . + 2 Parent=GSCOCT00030085001 | |
| 8436 chr1 manual_curation CDS 24172679 24173326 . + 0 Parent=GSCOCT00030085001 | |
| 8437 chr1 manual_curation gene 24176752 24177612 . + . ID=GSCOCG00030086001;Name=Cc01_g06840 | |
| 8438 chr1 manual_curation mRNA 24176752 24177612 . + . ID=GSCOCT00030086001;Parent=GSCOCG00030086001;Name=Cc01_g06840 | |
| 8439 chr1 manual_curation polypeptide 24176752 24176940 . + . ID=GSCOCP00030086001;Derives_from=GSCOCT00030086001;Name=Cc01_g06840;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030086001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1284092..1284280;owner=coffea | |
| 8440 chr1 manual_curation exon 24176752 24177612 . + . Parent=GSCOCT00030086001 | |
| 8441 chr1 manual_curation CDS 24176752 24176940 . + 0 Parent=GSCOCT00030086001 | |
| 8442 chr1 manual_curation gene 24178667 24179882 . - . ID=GSCOCG00030087001;Name=Cc01_g06850 | |
| 8443 chr1 manual_curation mRNA 24178667 24179882 . - . ID=GSCOCT00030087001;Parent=GSCOCG00030087001;Name=Cc01_g06850 | |
| 8444 chr1 manual_curation polypeptide 24178667 24179882 . - . ID=GSCOCP00030087001;Dbxref=InterPro:IPR004598,PANTHER:PTHR13152,PFAM:PF03849,TAIR:AT4G17020.3,TrEMBL:A5BMX1,TrEMBL:B9H2W7,TrEMBL:B9RZ76;Derives_from=GSCOCT00030087001;Name=Cc01_g06850;Ontology_term=CC_evidence_code:ISS,GO:0003702,GO:0005634,GO:0006281,CC_EC_number:missing_EC_number,PRODUCT:Putative Transcription factor Tfb2,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030087001~ Putative Transcription factor Tfb2~ unknown_gene~ complete;original_location=complement(join(1287166..1287222%2C1286819..1286977%2C1286563..1286598%2C1286383..1286466%2C1286007..1286117));owner=coffea | |
| 8445 chr1 manual_curation exon 24178667 24178777 . - . Parent=GSCOCT00030087001 | |
| 8446 chr1 manual_curation exon 24179043 24179126 . - . Parent=GSCOCT00030087001 | |
| 8447 chr1 manual_curation exon 24179223 24179258 . - . Parent=GSCOCT00030087001 | |
| 8448 chr1 manual_curation exon 24179479 24179637 . - . Parent=GSCOCT00030087001 | |
| 8449 chr1 manual_curation exon 24179826 24179882 . - . Parent=GSCOCT00030087001 | |
| 8450 chr1 manual_curation CDS 24178667 24178777 . - 0 Parent=GSCOCT00030087001 | |
| 8451 chr1 manual_curation CDS 24179043 24179126 . - 0 Parent=GSCOCT00030087001 | |
| 8452 chr1 manual_curation CDS 24179223 24179258 . - 0 Parent=GSCOCT00030087001 | |
| 8453 chr1 manual_curation CDS 24179479 24179637 . - 0 Parent=GSCOCT00030087001 | |
| 8454 chr1 manual_curation CDS 24179826 24179882 . - 0 Parent=GSCOCT00030087001 | |
| 8455 chr1 manual_curation gene 24186031 24190673 . + . ID=GSCOCG00030089001;Name=Cc01_g06860 | |
| 8456 chr1 manual_curation mRNA 24186031 24190673 . + . ID=GSCOCT00030089001;Parent=GSCOCG00030089001;Name=Cc01_g06860 | |
| 8457 chr1 manual_curation polypeptide 24186759 24190227 . + . ID=GSCOCP00030089001;Dbxref=InterPro:IPR003653,PFAM:PF02902,PROFILE:PS50600,SwissProt:Q0WKV8,SwissProt:Q2PS26,SwissProt:Q8L7S0,TAIR:AT1G09730.1,TAIR:AT3G48480.1,TAIR:AT4G33620.1,TrEMBL:B9HYH3,TrEMBL:D7SHA6,TrEMBL:Q6L4B6;Derives_from=GSCOCT00030089001;Name=Cc01_g06860;Ontology_term=CC_evidence_code:ISS,GO:0006508,GO:0008234,CC_EC_number:missing_EC_number,PRODUCT:Predicted protein,CC_functional_completeness:modules,CC_gene:ULP2A,CC_gene:ULP2B,CC_gene:ULP1D;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030089001~ Predicted protein~ ULP2A~ modules;original_location=join(1294099..1294207%2C1295325..1295507%2C1296127..1296523%2C1296610..1296777%2C1296864..1296995%2C1297097..1297178%2C1297278..1297391%2C1297475..1297567);owner=coffea | |
| 8458 chr1 manual_curation exon 24186031 24186867 . + . Parent=GSCOCT00030089001 | |
| 8459 chr1 manual_curation exon 24187985 24188167 . + . Parent=GSCOCT00030089001 | |
| 8460 chr1 manual_curation exon 24188787 24189183 . + . Parent=GSCOCT00030089001 | |
| 8461 chr1 manual_curation exon 24189270 24189437 . + . Parent=GSCOCT00030089001 | |
| 8462 chr1 manual_curation exon 24189524 24189655 . + . Parent=GSCOCT00030089001 | |
| 8463 chr1 manual_curation exon 24189757 24189838 . + . Parent=GSCOCT00030089001 | |
| 8464 chr1 manual_curation exon 24189938 24190051 . + . Parent=GSCOCT00030089001 | |
| 8465 chr1 manual_curation exon 24190135 24190673 . + . Parent=GSCOCT00030089001 | |
| 8466 chr1 manual_curation CDS 24186759 24186867 . + 0 Parent=GSCOCT00030089001 | |
| 8467 chr1 manual_curation CDS 24187985 24188167 . + 1 Parent=GSCOCT00030089001 | |
| 8468 chr1 manual_curation CDS 24188787 24189183 . + 1 Parent=GSCOCT00030089001 | |
| 8469 chr1 manual_curation CDS 24189270 24189437 . + 2 Parent=GSCOCT00030089001 | |
| 8470 chr1 manual_curation CDS 24189524 24189655 . + 2 Parent=GSCOCT00030089001 | |
| 8471 chr1 manual_curation CDS 24189757 24189838 . + 2 Parent=GSCOCT00030089001 | |
| 8472 chr1 manual_curation CDS 24189938 24190051 . + 0 Parent=GSCOCT00030089001 | |
| 8473 chr1 manual_curation CDS 24190135 24190227 . + 0 Parent=GSCOCT00030089001 | |
| 8474 chr1 manual_curation gene 24191155 24193176 . - . ID=GSCOCG00030090001;Name=Cc01_g06870 | |
| 8475 chr1 manual_curation mRNA 24191155 24193176 . - . ID=GSCOCT00030090001;Parent=GSCOCG00030090001;Name=Cc01_g06870 | |
| 8476 chr1 manual_curation polypeptide 24191155 24193176 . - . ID=GSCOCP00030090001;Dbxref=InterPro:IPR000109,InterPro:IPR016196,PFAM:PF00854,SUPERFAMILY:SSF103473,SwissProt:Q8H157,SwissProt:Q8VYE4,SwissProt:Q93VV5,TAIR:AT1G27040.1,TAIR:AT1G59740.1,TAIR:AT1G69850.1,TrEMBL:I1JR08,TrEMBL:I1NET2,TrEMBL:Q2HRU3;Derives_from=GSCOCT00030090001;Name=Cc01_g06870;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006857,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative Nitrate transporter 1.2,CC_functional_completeness:complete,CC_gene:NRT1.2,CC_gene:At1g27040,CC_gene:At1g59740;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030090001~ Putative Nitrate transporter 1.2~ NRT1.2~ complete;original_location=complement(join(1300256..1300516%2C1299748..1300170%2C1299524..1299630%2C1299426..1299464%2C1298495..1299377));owner=coffea | |
| 8477 chr1 manual_curation exon 24191155 24192037 . - . Parent=GSCOCT00030090001 | |
| 8478 chr1 manual_curation exon 24192086 24192124 . - . Parent=GSCOCT00030090001 | |
| 8479 chr1 manual_curation exon 24192184 24192290 . - . Parent=GSCOCT00030090001 | |
| 8480 chr1 manual_curation exon 24192408 24192830 . - . Parent=GSCOCT00030090001 | |
| 8481 chr1 manual_curation exon 24192916 24193176 . - . Parent=GSCOCT00030090001 | |
| 8482 chr1 manual_curation CDS 24191155 24192037 . - 2 Parent=GSCOCT00030090001 | |
| 8483 chr1 manual_curation CDS 24192086 24192124 . - 2 Parent=GSCOCT00030090001 | |
| 8484 chr1 manual_curation CDS 24192184 24192290 . - 0 Parent=GSCOCT00030090001 | |
| 8485 chr1 manual_curation CDS 24192408 24192830 . - 0 Parent=GSCOCT00030090001 | |
| 8486 chr1 manual_curation CDS 24192916 24193176 . - 0 Parent=GSCOCT00030090001 | |
| 8487 chr1 manual_curation gene 24215568 24222983 . + . ID=GSCOCG00030092001;Name=Cc01_g06880 | |
| 8488 chr1 manual_curation mRNA 24215568 24222983 . + . ID=GSCOCT00030092001;Parent=GSCOCG00030092001;Name=Cc01_g06880 | |
| 8489 chr1 manual_curation polypeptide 24215568 24222564 . + . ID=GSCOCP00030092001;Dbxref=InterPro:IPR007120,InterPro:IPR007121,InterPro:IPR007641,InterPro:IPR007642,InterPro:IPR007644,InterPro:IPR007645,InterPro:IPR007646,InterPro:IPR007647,InterPro:IPR015712,PANTHER:PTHR20856,PFAM:PF00562,PFAM:PF04560,PFAM:PF04561,PFAM:PF04563,PFAM:PF04565,PFAM:PF04566,PFAM:PF04567,PROSITE:PS01166,SwissProt:P38420,SwissProt:Q9LK40,SwissProt:Q9LV32,TAIR:AT3G18090.1,TAIR:AT3G23780.1,TAIR:AT4G21710.1,TrEMBL:B9RNV9,TrEMBL:F6H335,TrEMBL:Q1L6V6;Derives_from=GSCOCT00030092001;Name=Cc01_g06880;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003899,GO:0006350,GO:0032549,CC_EC_number:missing_EC_number,PRODUCT:DNA-directed RNA polymerase D subunit 2a,CC_functional_completeness:complete,CC_gene:NRPD2a,CC_gene:NRPD2b,CC_gene:RPB135;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030092001~ DNA-directed RNA polymerase D subunit 2a~ NRPD2a~ complete;original_location=join(1322908..1323414%2C1324270..1324482%2C1325253..1326160%2C1326481..1326772%2C1327453..1328400%2C1329018..1329289%2C1329403..1329904);owner=coffea | |
| 8490 chr1 manual_curation exon 24215568 24216074 . + . Parent=GSCOCT00030092001 | |
| 8491 chr1 manual_curation exon 24216930 24217142 . + . Parent=GSCOCT00030092001 | |
| 8492 chr1 manual_curation exon 24217913 24218820 . + . Parent=GSCOCT00030092001 | |
| 8493 chr1 manual_curation exon 24219141 24219432 . + . Parent=GSCOCT00030092001 | |
| 8494 chr1 manual_curation exon 24220113 24221060 . + . Parent=GSCOCT00030092001 | |
| 8495 chr1 manual_curation exon 24221678 24221949 . + . Parent=GSCOCT00030092001 | |
| 8496 chr1 manual_curation exon 24222063 24222983 . + . Parent=GSCOCT00030092001 | |
| 8497 chr1 manual_curation CDS 24215568 24216074 . + 0 Parent=GSCOCT00030092001 | |
| 8498 chr1 manual_curation CDS 24216930 24217142 . + 0 Parent=GSCOCT00030092001 | |
| 8499 chr1 manual_curation CDS 24217913 24218820 . + 0 Parent=GSCOCT00030092001 | |
| 8500 chr1 manual_curation CDS 24219141 24219432 . + 2 Parent=GSCOCT00030092001 | |
| 8501 chr1 manual_curation CDS 24220113 24221060 . + 0 Parent=GSCOCT00030092001 | |
| 8502 chr1 manual_curation CDS 24221678 24221949 . + 0 Parent=GSCOCT00030092001 | |
| 8503 chr1 manual_curation CDS 24222063 24222564 . + 2 Parent=GSCOCT00030092001 | |
| 8504 chr1 manual_curation gene 24228166 24230615 . - . ID=GSCOCG00030094001;Name=Cc01_g06890 | |
| 8505 chr1 manual_curation mRNA 24228166 24230615 . - . ID=GSCOCT00030094001;Parent=GSCOCG00030094001;Name=Cc01_g06890 | |
| 8506 chr1 manual_curation polypeptide 24228166 24230615 . - . ID=GSCOCP00030094001;Dbxref=InterPro:IPR000109,PFAM:PF00854,SwissProt:Q8H157,SwissProt:Q8VYE4,SwissProt:Q93VV5,TAIR:AT1G27040.1,TAIR:AT1G59740.1,TAIR:AT1G69850.1,TrEMBL:B9RFS2,TrEMBL:F6I4I9,TrEMBL:I1NBM0;Derives_from=GSCOCT00030094001;Name=Cc01_g06890;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006857,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative Major facilitator superfamily protein,CC_functional_completeness:fragment,CC_gene:At1g27040,CC_gene:At1g59740,CC_gene:NRT1.2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030094001~ Putative Major facilitator superfamily protein~ At1g27040~ fragment;original_location=complement(join(1337931..1337955%2C1337769..1337840%2C1337377..1337594%2C1336739..1336773%2C1336324..1336404%2C1335506..1336139));owner=coffea | |
| 8507 chr1 manual_curation exon 24228166 24228799 . - . Parent=GSCOCT00030094001 | |
| 8508 chr1 manual_curation exon 24228984 24229064 . - . Parent=GSCOCT00030094001 | |
| 8509 chr1 manual_curation exon 24229399 24229433 . - . Parent=GSCOCT00030094001 | |
| 8510 chr1 manual_curation exon 24230037 24230254 . - . Parent=GSCOCT00030094001 | |
| 8511 chr1 manual_curation exon 24230429 24230500 . - . Parent=GSCOCT00030094001 | |
| 8512 chr1 manual_curation exon 24230591 24230615 . - . Parent=GSCOCT00030094001 | |
| 8513 chr1 manual_curation CDS 24228166 24228799 . - 2 Parent=GSCOCT00030094001 | |
| 8514 chr1 manual_curation CDS 24228984 24229064 . - 2 Parent=GSCOCT00030094001 | |
| 8515 chr1 manual_curation CDS 24229399 24229433 . - 0 Parent=GSCOCT00030094001 | |
| 8516 chr1 manual_curation CDS 24230037 24230254 . - 1 Parent=GSCOCT00030094001 | |
| 8517 chr1 manual_curation CDS 24230429 24230500 . - 1 Parent=GSCOCT00030094001 | |
| 8518 chr1 manual_curation CDS 24230591 24230615 . - 0 Parent=GSCOCT00030094001 | |
| 8519 chr1 manual_curation gene 24245901 24246929 . - . ID=GSCOCG00030098001;Name=Cc01_g06900 | |
| 8520 chr1 manual_curation mRNA 24245901 24246929 . - . ID=GSCOCT00030098001;Parent=GSCOCG00030098001;Name=Cc01_g06900 | |
| 8521 chr1 manual_curation polypeptide 24245901 24246929 . - . ID=GSCOCP00030098001;Dbxref=InterPro:IPR000109,InterPro:IPR016196,PFAM:PF00854,SUPERFAMILY:SSF103473,SwissProt:Q93VV5,SwissProt:Q9LFB8,SwissProt:Q9M390,TAIR:AT1G59740.1,TAIR:AT3G54140.1,TAIR:AT5G01180.1,TrEMBL:I1LAX9,TrEMBL:I1NBM0,TrEMBL:I1NET2;Derives_from=GSCOCT00030098001;Name=Cc01_g06900;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006857,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative Peptide transporter PTR1,CC_functional_completeness:fragment,CC_gene:PTR1,CC_gene:PTR5,CC_gene:At1g59740;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030098001~ Putative Peptide transporter PTR1~ PTR1~ fragment;original_location=complement(join(1354090..1354269%2C1353578..1354000%2C1353379..1353488%2C1353241..1353319));owner=coffea | |
| 8522 chr1 manual_curation exon 24245901 24245979 . - . Parent=GSCOCT00030098001 | |
| 8523 chr1 manual_curation exon 24246039 24246148 . - . Parent=GSCOCT00030098001 | |
| 8524 chr1 manual_curation exon 24246238 24246660 . - . Parent=GSCOCT00030098001 | |
| 8525 chr1 manual_curation exon 24246750 24246929 . - . Parent=GSCOCT00030098001 | |
| 8526 chr1 manual_curation CDS 24245901 24245979 . - 2 Parent=GSCOCT00030098001 | |
| 8527 chr1 manual_curation CDS 24246039 24246148 . - 0 Parent=GSCOCT00030098001 | |
| 8528 chr1 manual_curation CDS 24246238 24246660 . - 0 Parent=GSCOCT00030098001 | |
| 8529 chr1 manual_curation CDS 24246750 24246929 . - 0 Parent=GSCOCT00030098001 | |
| 8530 chr1 manual_curation gene 24263783 24266311 . + . ID=GSCOCG00030100001;Name=Cc01_g06910 | |
| 8531 chr1 manual_curation mRNA 24263783 24266311 . + . ID=GSCOCT00030100001;Parent=GSCOCG00030100001;Name=Cc01_g06910 | |
| 8532 chr1 manual_curation polypeptide 24263783 24266311 . + . ID=GSCOCP00030100001;Dbxref=InterPro:IPR000767,InterPro:IPR001611,InterPro:IPR002182,InterPro:IPR003593,PFAM:PF00560,PFAM:PF00931,PRINTS:PR00364,SMART:SM00382,SwissProt:O82484,SwissProt:Q8RXS5,SwissProt:Q9T048,TAIR:AT4G10780.1,TAIR:AT4G27190.1,TAIR:AT5G63020.1,TrEMBL:B9HZZ4,TrEMBL:B9N1L5,TrEMBL:I1LUV4;Derives_from=GSCOCT00030100001;Name=Cc01_g06910;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005515,GO:0005524,GO:0006915,GO:0006952,GO:0017111,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable disease resistance protein At5g63020,CC_functional_completeness:fragment,CC_gene:At4g10780,CC_gene:At5g63020,CC_gene:At4g27190;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030100001~ Putative Probable disease resistance protein At5g63020~ At4g10780~ fragment;original_location=join(1371123..1372381%2C1372442..1373651);owner=coffea | |
| 8533 chr1 manual_curation exon 24263783 24265041 . + . Parent=GSCOCT00030100001 | |
| 8534 chr1 manual_curation exon 24265102 24266311 . + . Parent=GSCOCT00030100001 | |
| 8535 chr1 manual_curation CDS 24263783 24265041 . + 0 Parent=GSCOCT00030100001 | |
| 8536 chr1 manual_curation CDS 24265102 24266311 . + 2 Parent=GSCOCT00030100001 | |
| 8537 chr1 manual_curation gene 24274978 24285520 . + . ID=GSCOCG00030101001;Name=Cc01_g06920 | |
| 8538 chr1 manual_curation mRNA 24274978 24285520 . + . ID=GSCOCT00030101001;Parent=GSCOCG00030101001;Name=Cc01_g06920 | |
| 8539 chr1 manual_curation polypeptide 24275274 24284730 . + . ID=GSCOCP00030101001;Dbxref=GENE3D:G3DSA:1.10.10.10,InterPro:IPR006607,InterPro:IPR006630,InterPro:IPR011991,PFAM:PF05383,PROFILE:PS50961,SMART:SM00684,SMART:SM00715,SwissProt:Q6PKG0,SwissProt:Q6ZQ58,SwissProt:Q9VAW5,TAIR:AT4G35890.1,TAIR:AT5G21160.3,TAIR:AT5G66100.1,TrEMBL:B9S0U6,TrEMBL:F6HA70,TrEMBL:I1M7A0;Derives_from=GSCOCT00030101001;Name=Cc01_g06920;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:Larp1,CC_gene:larp,CC_gene:LARP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030101001~ Putative uncharacterized protein~ Larp1~ complete;original_location=join(1382614..1382868%2C1383783..1384293%2C1384446..1384614%2C1385111..1385201%2C1385318..1385389%2C1385533..1386077%2C1387065..1387134%2C1387667..1387771%2C1387849..1388189%2C1388395..1388538%2C1388648..1388711%2C1391160..1391305%2C1391483..1391587%2C1391920..1392070);owner=coffea | |
| 8540 chr1 manual_curation exon 24274978 24275528 . + . Parent=GSCOCT00030101001 | |
| 8541 chr1 manual_curation exon 24276443 24276953 . + . Parent=GSCOCT00030101001 | |
| 8542 chr1 manual_curation exon 24277106 24277274 . + . Parent=GSCOCT00030101001 | |
| 8543 chr1 manual_curation exon 24277771 24277861 . + . Parent=GSCOCT00030101001 | |
| 8544 chr1 manual_curation exon 24277978 24278049 . + . Parent=GSCOCT00030101001 | |
| 8545 chr1 manual_curation exon 24278193 24278737 . + . Parent=GSCOCT00030101001 | |
| 8546 chr1 manual_curation exon 24279725 24279794 . + . Parent=GSCOCT00030101001 | |
| 8547 chr1 manual_curation exon 24280327 24280431 . + . Parent=GSCOCT00030101001 | |
| 8548 chr1 manual_curation exon 24280509 24280849 . + . Parent=GSCOCT00030101001 | |
| 8549 chr1 manual_curation exon 24281055 24281198 . + . Parent=GSCOCT00030101001 | |
| 8550 chr1 manual_curation exon 24281308 24281371 . + . Parent=GSCOCT00030101001 | |
| 8551 chr1 manual_curation exon 24283820 24283965 . + . Parent=GSCOCT00030101001 | |
| 8552 chr1 manual_curation exon 24284143 24284247 . + . Parent=GSCOCT00030101001 | |
| 8553 chr1 manual_curation exon 24284580 24285520 . + . Parent=GSCOCT00030101001 | |
| 8554 chr1 manual_curation CDS 24275274 24275528 . + 0 Parent=GSCOCT00030101001 | |
| 8555 chr1 manual_curation CDS 24276443 24276953 . + 0 Parent=GSCOCT00030101001 | |
| 8556 chr1 manual_curation CDS 24277106 24277274 . + 1 Parent=GSCOCT00030101001 | |
| 8557 chr1 manual_curation CDS 24277771 24277861 . + 2 Parent=GSCOCT00030101001 | |
| 8558 chr1 manual_curation CDS 24277978 24278049 . + 0 Parent=GSCOCT00030101001 | |
| 8559 chr1 manual_curation CDS 24278193 24278737 . + 0 Parent=GSCOCT00030101001 | |
| 8560 chr1 manual_curation CDS 24279725 24279794 . + 2 Parent=GSCOCT00030101001 | |
| 8561 chr1 manual_curation CDS 24280327 24280431 . + 0 Parent=GSCOCT00030101001 | |
| 8562 chr1 manual_curation CDS 24280509 24280849 . + 0 Parent=GSCOCT00030101001 | |
| 8563 chr1 manual_curation CDS 24281055 24281198 . + 2 Parent=GSCOCT00030101001 | |
| 8564 chr1 manual_curation CDS 24281308 24281371 . + 2 Parent=GSCOCT00030101001 | |
| 8565 chr1 manual_curation CDS 24283820 24283965 . + 0 Parent=GSCOCT00030101001 | |
| 8566 chr1 manual_curation CDS 24284143 24284247 . + 2 Parent=GSCOCT00030101001 | |
| 8567 chr1 manual_curation CDS 24284580 24284730 . + 2 Parent=GSCOCT00030101001 | |
| 8568 chr1 manual_curation gene 24290586 24296067 . - . ID=GSCOCG00030103001;Name=Cc01_g06930 | |
| 8569 chr1 manual_curation mRNA 24290586 24296067 . - . ID=GSCOCT00030103001;Parent=GSCOCG00030103001;Name=Cc01_g06930 | |
| 8570 chr1 manual_curation polypeptide 24290586 24296067 . - . ID=GSCOCP00030103001;Dbxref=InterPro:IPR007087,InterPro:IPR015880,PROFILE:PS50157,PROSITE:PS00028,SMART:SM00355,SwissProt:O65499,SwissProt:Q96289,SwissProt:Q9SHD0,TAIR:AT3G19580.1,TAIR:AT4G35280.1,TAIR:AT5G56200.1,TrEMBL:D7UAU2,TrEMBL:P93716,TrEMBL:Q6L4C0;Derives_from=GSCOCT00030103001;Name=Cc01_g06930;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative Zinc finger protein ZAT3,CC_functional_completeness:modules,CC_gene:ZAT3,CC_gene:ZAT4,CC_gene:ZAT10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030103001~ Putative Zinc finger protein ZAT3~ ZAT3~ modules;original_location=complement(join(1402520..1403407%2C1401694..1402288%2C1398594..1399028%2C1397926..1398377));owner=coffea | |
| 8571 chr1 manual_curation exon 24290586 24291037 . - . Parent=GSCOCT00030103001 | |
| 8572 chr1 manual_curation exon 24291254 24291688 . - . Parent=GSCOCT00030103001 | |
| 8573 chr1 manual_curation exon 24294354 24294948 . - . Parent=GSCOCT00030103001 | |
| 8574 chr1 manual_curation exon 24295180 24296067 . - . Parent=GSCOCT00030103001 | |
| 8575 chr1 manual_curation CDS 24290586 24291037 . - 1 Parent=GSCOCT00030103001 | |
| 8576 chr1 manual_curation CDS 24291254 24291688 . - 1 Parent=GSCOCT00030103001 | |
| 8577 chr1 manual_curation CDS 24294354 24294948 . - 0 Parent=GSCOCT00030103001 | |
| 8578 chr1 manual_curation CDS 24295180 24296067 . - 0 Parent=GSCOCT00030103001 | |
| 8579 chr1 manual_curation gene 24315837 24318893 . - . ID=GSCOCG00030106001;Name=Cc01_g06940 | |
| 8580 chr1 manual_curation mRNA 24315837 24318893 . - . ID=GSCOCT00030106001;Parent=GSCOCG00030106001;Name=Cc01_g06940 | |
| 8581 chr1 manual_curation polypeptide 24316172 24318509 . - . ID=GSCOCP00030106001;Derives_from=GSCOCT00030106001;Name=Cc01_g06940;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030106001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1425698..1425849%2C1423512..1423623));owner=coffea | |
| 8582 chr1 manual_curation exon 24315837 24316283 . - . Parent=GSCOCT00030106001 | |
| 8583 chr1 manual_curation exon 24318358 24318893 . - . Parent=GSCOCT00030106001 | |
| 8584 chr1 manual_curation CDS 24316172 24316283 . - 2 Parent=GSCOCT00030106001 | |
| 8585 chr1 manual_curation CDS 24318358 24318509 . - 0 Parent=GSCOCT00030106001 | |
| 8586 chr1 manual_curation gene 24318946 24320015 . - . ID=GSCOCG00030107001;Name=Cc01_g06950 | |
| 8587 chr1 manual_curation mRNA 24318946 24320015 . - . ID=GSCOCT00030107001;Parent=GSCOCG00030107001;Name=Cc01_g06950 | |
| 8588 chr1 manual_curation polypeptide 24319650 24319908 . - . ID=GSCOCP00030107001;Derives_from=GSCOCT00030107001;Name=Cc01_g06950;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030107001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1427186..1427248%2C1426990..1427163));owner=coffea | |
| 8589 chr1 manual_curation exon 24318946 24319823 . - . Parent=GSCOCT00030107001 | |
| 8590 chr1 manual_curation exon 24319846 24320015 . - . Parent=GSCOCT00030107001 | |
| 8591 chr1 manual_curation CDS 24319650 24319823 . - 0 Parent=GSCOCT00030107001 | |
| 8592 chr1 manual_curation CDS 24319846 24319908 . - 0 Parent=GSCOCT00030107001 | |
| 8593 chr1 manual_curation gene 24330131 24338666 . + . ID=GSCOCG00030108001;Name=Cc01_g06960 | |
| 8594 chr1 manual_curation mRNA 24330131 24338666 . + . ID=GSCOCT00030108001;Parent=GSCOCG00030108001;Name=Cc01_g06960 | |
| 8595 chr1 manual_curation polypeptide 24330740 24338303 . + . ID=GSCOCP00030108001;Dbxref=SwissProt:Q9C5Q2,SwissProt:Q9LES3,SwissProt:Q9M7Q5,TAIR:AT1G49720.2,TAIR:AT2G41070.1,TAIR:AT3G56850.1,TrEMBL:F6H9Y6,TrEMBL:H3K1P3,TrEMBL:I1LWA6;Derives_from=GSCOCT00030108001;Name=Cc01_g06960;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative ABSCISIC ACID-INSENSITIVE 5-like protein 2,CC_functional_completeness:complete,CC_gene:DPBF3,CC_gene:DPBF4,CC_gene:ABF1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030108001~ Putative ABSCISIC ACID-INSENSITIVE 5-like protein 2~ DPBF3~ complete;original_location=join(1438080..1438619%2C1438807..1438878%2C1445569..1445643);owner=coffea | |
| 8596 chr1 manual_curation exon 24330131 24330234 . + . Parent=GSCOCT00030108001 | |
| 8597 chr1 manual_curation exon 24330683 24331279 . + . Parent=GSCOCT00030108001 | |
| 8598 chr1 manual_curation exon 24331467 24331538 . + . Parent=GSCOCT00030108001 | |
| 8599 chr1 manual_curation exon 24338229 24338666 . + . Parent=GSCOCT00030108001 | |
| 8600 chr1 manual_curation CDS 24330740 24331279 . + 0 Parent=GSCOCT00030108001 | |
| 8601 chr1 manual_curation CDS 24331467 24331538 . + 0 Parent=GSCOCT00030108001 | |
| 8602 chr1 manual_curation CDS 24338229 24338303 . + 0 Parent=GSCOCT00030108001 | |
| 8603 chr1 manual_curation gene 24344642 24346532 . + . ID=GSCOCG00030109001;Name=Cc01_g06970 | |
| 8604 chr1 manual_curation mRNA 24344642 24346532 . + . ID=GSCOCT00030109001;Parent=GSCOCG00030109001;Name=Cc01_g06970 | |
| 8605 chr1 manual_curation polypeptide 24344695 24346305 . + . ID=GSCOCP00030109001;Dbxref=InterPro:IPR005123,PFAM:PF03171,SwissProt:P24397,SwissProt:Q07512,SwissProt:Q40062,TAIR:AT2G44800.1,TAIR:AT4G10490.1,TAIR:AT5G24530.1,TrEMBL:B9T297,TrEMBL:D7U2Y4,TrEMBL:Q8LKP6;Derives_from=GSCOCT00030109001;Name=Cc01_g06970;Ontology_term=CC_evidence_code:ISS,GO:0016491,CC_EC_number:1.14.11.11,PRODUCT:Putative Hyoscyamine 6-dioxygenase,CC_functional_completeness:complete,CC_gene:H6H,CC_gene:IDS3,CC_gene:FL;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030109001~ Putative Hyoscyamine 6-dioxygenase~ H6H~ complete;original_location=join(1452035..1452229%2C1452332..1452582%2C1452722..1453028%2C1453385..1453645);owner=coffea | |
| 8606 chr1 manual_curation exon 24344642 24344889 . + . Parent=GSCOCT00030109001 | |
| 8607 chr1 manual_curation exon 24344992 24345242 . + . Parent=GSCOCT00030109001 | |
| 8608 chr1 manual_curation exon 24345382 24345688 . + . Parent=GSCOCT00030109001 | |
| 8609 chr1 manual_curation exon 24346045 24346532 . + . Parent=GSCOCT00030109001 | |
| 8610 chr1 manual_curation CDS 24344695 24344889 . + 0 Parent=GSCOCT00030109001 | |
| 8611 chr1 manual_curation CDS 24344992 24345242 . + 0 Parent=GSCOCT00030109001 | |
| 8612 chr1 manual_curation CDS 24345382 24345688 . + 2 Parent=GSCOCT00030109001 | |
| 8613 chr1 manual_curation CDS 24346045 24346305 . + 0 Parent=GSCOCT00030109001 | |
| 8614 chr1 manual_curation gene 24349932 24351784 . + . ID=GSCOCG00030111001;Name=Cc01_g06980 | |
| 8615 chr1 manual_curation mRNA 24349932 24351784 . + . ID=GSCOCT00030111001;Parent=GSCOCG00030111001;Name=Cc01_g06980 | |
| 8616 chr1 manual_curation polypeptide 24349932 24351784 . + . ID=GSCOCP00030111001;Dbxref=InterPro:IPR005123,PFAM:PF03171,SwissProt:P24397,SwissProt:Q07512,SwissProt:Q40062,TAIR:AT4G10490.1,TAIR:AT4G10500.1,TAIR:AT5G24530.1,TrEMBL:B9H8K9,TrEMBL:Q8LKP6,TrEMBL:Q9XJ43;Derives_from=GSCOCT00030111001;Name=Cc01_g06980;Ontology_term=CC_evidence_code:ISS,GO:0016491,CC_EC_number:1.14.11.11,PRODUCT:Putative Hyoscyamine 6-dioxygenase,CC_functional_completeness:complete,CC_gene:H6H,CC_gene:IDS3,CC_gene:FL;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030111001~ Putative Hyoscyamine 6-dioxygenase~ H6H~ complete;original_location=join(1457272..1457466%2C1457597..1457853%2C1458121..1458427%2C1458876..1459124);owner=coffea | |
| 8617 chr1 manual_curation exon 24349932 24350126 . + . Parent=GSCOCT00030111001 | |
| 8618 chr1 manual_curation exon 24350257 24350513 . + . Parent=GSCOCT00030111001 | |
| 8619 chr1 manual_curation exon 24350781 24351087 . + . Parent=GSCOCT00030111001 | |
| 8620 chr1 manual_curation exon 24351536 24351784 . + . Parent=GSCOCT00030111001 | |
| 8621 chr1 manual_curation CDS 24349932 24350126 . + 0 Parent=GSCOCT00030111001 | |
| 8622 chr1 manual_curation CDS 24350257 24350513 . + 0 Parent=GSCOCT00030111001 | |
| 8623 chr1 manual_curation CDS 24350781 24351087 . + 2 Parent=GSCOCT00030111001 | |
| 8624 chr1 manual_curation CDS 24351536 24351784 . + 0 Parent=GSCOCT00030111001 | |
| 8625 chr1 manual_curation gene 24353489 24355119 . + . ID=GSCOCG00030112001;Name=Cc01_g06990 | |
| 8626 chr1 manual_curation mRNA 24353489 24355119 . + . ID=GSCOCT00030112001;Parent=GSCOCG00030112001;Name=Cc01_g06990 | |
| 8627 chr1 manual_curation polypeptide 24353489 24355119 . + . ID=GSCOCP00030112001;Dbxref=SwissProt:P24397,SwissProt:Q40061,SwissProt:Q40062,TAIR:AT2G44800.1,TAIR:AT4G10490.1,TAIR:AT5G24530.1,TrEMBL:B9H8K9,TrEMBL:B9T297,TrEMBL:D7U2Y4;Derives_from=GSCOCT00030112001;Name=Cc01_g06990;Ontology_term=CC_evidence_code:ISS,CC_EC_number:1.14.11.11,PRODUCT:Putative Hyoscyamine 6-dioxygenase,CC_functional_completeness:complete,CC_gene:H6H,CC_gene:IDS3,CC_gene:IDS2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030112001~ Putative Hyoscyamine 6-dioxygenase~ H6H~ complete;original_location=join(1460829..1461026%2C1461117..1461367%2C1461631..1461809%2C1461869..1461948%2C1462217..1462459);owner=coffea | |
| 8628 chr1 manual_curation exon 24353489 24353686 . + . Parent=GSCOCT00030112001 | |
| 8629 chr1 manual_curation exon 24353777 24354027 . + . Parent=GSCOCT00030112001 | |
| 8630 chr1 manual_curation exon 24354291 24354469 . + . Parent=GSCOCT00030112001 | |
| 8631 chr1 manual_curation exon 24354529 24354608 . + . Parent=GSCOCT00030112001 | |
| 8632 chr1 manual_curation exon 24354877 24355119 . + . Parent=GSCOCT00030112001 | |
| 8633 chr1 manual_curation CDS 24353489 24353686 . + 0 Parent=GSCOCT00030112001 | |
| 8634 chr1 manual_curation CDS 24353777 24354027 . + 0 Parent=GSCOCT00030112001 | |
| 8635 chr1 manual_curation CDS 24354291 24354469 . + 2 Parent=GSCOCT00030112001 | |
| 8636 chr1 manual_curation CDS 24354529 24354608 . + 1 Parent=GSCOCT00030112001 | |
| 8637 chr1 manual_curation CDS 24354877 24355119 . + 0 Parent=GSCOCT00030112001 | |
| 8638 chr1 manual_curation gene 24419297 24420669 . - . ID=GSCOCG00030114001;Name=Cc01_g07000 | |
| 8639 chr1 manual_curation mRNA 24419297 24420669 . - . ID=GSCOCT00030114001;Parent=GSCOCG00030114001;Name=Cc01_g07000 | |
| 8640 chr1 manual_curation polypeptide 24419297 24420669 . - . ID=GSCOCP00030114001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q9FN92,SwissProt:Q9LX66,SwissProt:Q9ZUE0,TAIR:AT1G21590.1,TAIR:AT1G77280.1,TAIR:AT5G63940.1,TrEMBL:B9S2T6,TrEMBL:C6ZRR5,TrEMBL:I1LXD7;Derives_from=GSCOCT00030114001;Name=Cc01_g07000;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable receptor-like protein kinase At5g59700,CC_functional_completeness:fragment,CC_gene:At5g59700,CC_gene:PERK12,CC_gene:HERK1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030114001~ Putative Probable receptor-like protein kinase At5g59700~ At5g59700~ fragment;original_location=complement(join(1527902..1528009%2C1527631..1527669%2C1527168..1527533%2C1526637..1526780));owner=coffea | |
| 8641 chr1 manual_curation exon 24419297 24419440 . - . Parent=GSCOCT00030114001 | |
| 8642 chr1 manual_curation exon 24419828 24420193 . - . Parent=GSCOCT00030114001 | |
| 8643 chr1 manual_curation exon 24420291 24420329 . - . Parent=GSCOCT00030114001 | |
| 8644 chr1 manual_curation exon 24420562 24420669 . - . Parent=GSCOCT00030114001 | |
| 8645 chr1 manual_curation CDS 24419297 24419440 . - 0 Parent=GSCOCT00030114001 | |
| 8646 chr1 manual_curation CDS 24419828 24420193 . - 0 Parent=GSCOCT00030114001 | |
| 8647 chr1 manual_curation CDS 24420291 24420329 . - 0 Parent=GSCOCT00030114001 | |
| 8648 chr1 manual_curation CDS 24420562 24420669 . - 0 Parent=GSCOCT00030114001 | |
| 8649 chr1 manual_curation gene 24452692 24454446 . + . ID=GSCOCG00030116001;Name=Cc01_g07010 | |
| 8650 chr1 manual_curation mRNA 24452692 24454446 . + . ID=GSCOCT00030116001;Parent=GSCOCG00030116001;Name=Cc01_g07010 | |
| 8651 chr1 manual_curation polypeptide 24452692 24454446 . + . ID=GSCOCP00030116001;Dbxref=InterPro:IPR005202,PFAM:PF03514,PROFILE:PS50985,SwissProt:Q6EI06,SwissProt:Q8S4W7,SwissProt:Q9SLH3,TAIR:AT2G01570.1,TAIR:AT3G03450.1,TAIR:AT5G17490.1,TrEMBL:B9GST2,TrEMBL:B9HWZ8,TrEMBL:B9RND9;Derives_from=GSCOCT00030116001;Name=Cc01_g07010;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative GRAS family transcription factor,CC_functional_completeness:modules,CC_gene:RGA,CC_gene:GAI1,CC_gene:GAIP;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030116001~ Putative GRAS family transcription factor~ RGA~ modules;original_location=join(1560032..1560873%2C1561039..1561786);owner=coffea | |
| 8652 chr1 manual_curation exon 24452692 24453533 . + . Parent=GSCOCT00030116001 | |
| 8653 chr1 manual_curation exon 24453699 24454446 . + . Parent=GSCOCT00030116001 | |
| 8654 chr1 manual_curation CDS 24452692 24453533 . + 0 Parent=GSCOCT00030116001 | |
| 8655 chr1 manual_curation CDS 24453699 24454446 . + 2 Parent=GSCOCT00030116001 | |
| 8656 chr1 manual_curation gene 24465029 24467100 . + . ID=GSCOCG00030118001;Name=Cc01_g07020 | |
| 8657 chr1 manual_curation mRNA 24465029 24467100 . + . ID=GSCOCT00030118001;Parent=GSCOCG00030118001;Name=Cc01_g07020 | |
| 8658 chr1 manual_curation polypeptide 24465329 24467100 . + . ID=GSCOCP00030118001;Dbxref=InterPro:IPR004314,PFAM:PF03080,TAIR:AT1G55360.1,TAIR:AT3G13510.1,TAIR:AT5G56530.1,TrEMBL:B9GY58,TrEMBL:D7SSN3,TrEMBL:I1KSP0;Derives_from=GSCOCT00030118001;Name=Cc01_g07020;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of Unknown Function (DUF239),CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030118001~ Protein of Unknown Function (DUF239)~ unknown_gene~ fragment;original_location=join(1572669..1572686%2C1572846..1572980%2C1573395..1573556%2C1573680..1573733%2C1573822..1573968%2C1574063..1574440);owner=coffea | |
| 8659 chr1 manual_curation exon 24465029 24465346 . + . Parent=GSCOCT00030118001 | |
| 8660 chr1 manual_curation exon 24465506 24465640 . + . Parent=GSCOCT00030118001 | |
| 8661 chr1 manual_curation exon 24466055 24466216 . + . Parent=GSCOCT00030118001 | |
| 8662 chr1 manual_curation exon 24466340 24466393 . + . Parent=GSCOCT00030118001 | |
| 8663 chr1 manual_curation exon 24466482 24466628 . + . Parent=GSCOCT00030118001 | |
| 8664 chr1 manual_curation exon 24466723 24467100 . + . Parent=GSCOCT00030118001 | |
| 8665 chr1 manual_curation CDS 24465329 24465346 . + 0 Parent=GSCOCT00030118001 | |
| 8666 chr1 manual_curation CDS 24465506 24465640 . + 0 Parent=GSCOCT00030118001 | |
| 8667 chr1 manual_curation CDS 24466055 24466216 . + 0 Parent=GSCOCT00030118001 | |
| 8668 chr1 manual_curation CDS 24466340 24466393 . + 0 Parent=GSCOCT00030118001 | |
| 8669 chr1 manual_curation CDS 24466482 24466628 . + 0 Parent=GSCOCT00030118001 | |
| 8670 chr1 manual_curation CDS 24466723 24467100 . + 0 Parent=GSCOCT00030118001 | |
| 8671 chr1 manual_curation gene 24513622 24515784 . + . ID=GSCOCG00030122001;Name=Cc01_g07030 | |
| 8672 chr1 manual_curation mRNA 24513622 24515784 . + . ID=GSCOCT00030122001;Parent=GSCOCG00030122001;Name=Cc01_g07030 | |
| 8673 chr1 manual_curation polypeptide 24513723 24515784 . + . ID=GSCOCP00030122001;Dbxref=InterPro:IPR004314,PFAM:PF03080,TAIR:AT1G55360.1,TAIR:AT3G13510.1,TAIR:AT5G56530.1,TrEMBL:B9T0D6,TrEMBL:D7SSN3,TrEMBL:I1KTU4;Derives_from=GSCOCT00030122001;Name=Cc01_g07030;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of Unknown Function (DUF239),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030122001~ Protein of Unknown Function (DUF239)~ unknown_gene~ complete;original_location=join(1621063..1621149%2C1621390..1621476%2C1621562..1621783%2C1622080..1622241%2C1622333..1622386%2C1622486..1622632%2C1622747..1623124);owner=coffea | |
| 8674 chr1 manual_curation exon 24513622 24513809 . + . Parent=GSCOCT00030122001 | |
| 8675 chr1 manual_curation exon 24514050 24514136 . + . Parent=GSCOCT00030122001 | |
| 8676 chr1 manual_curation exon 24514222 24514443 . + . Parent=GSCOCT00030122001 | |
| 8677 chr1 manual_curation exon 24514740 24514901 . + . Parent=GSCOCT00030122001 | |
| 8678 chr1 manual_curation exon 24514993 24515046 . + . Parent=GSCOCT00030122001 | |
| 8679 chr1 manual_curation exon 24515146 24515292 . + . Parent=GSCOCT00030122001 | |
| 8680 chr1 manual_curation exon 24515407 24515784 . + . Parent=GSCOCT00030122001 | |
| 8681 chr1 manual_curation CDS 24513723 24513809 . + 0 Parent=GSCOCT00030122001 | |
| 8682 chr1 manual_curation CDS 24514050 24514136 . + 0 Parent=GSCOCT00030122001 | |
| 8683 chr1 manual_curation CDS 24514222 24514443 . + 0 Parent=GSCOCT00030122001 | |
| 8684 chr1 manual_curation CDS 24514740 24514901 . + 0 Parent=GSCOCT00030122001 | |
| 8685 chr1 manual_curation CDS 24514993 24515046 . + 0 Parent=GSCOCT00030122001 | |
| 8686 chr1 manual_curation CDS 24515146 24515292 . + 0 Parent=GSCOCT00030122001 | |
| 8687 chr1 manual_curation CDS 24515407 24515784 . + 0 Parent=GSCOCT00030122001 | |
| 8688 chr1 manual_curation gene 24517973 24521901 . + . ID=GSCOCG00030124001;Name=Cc01_g07040 | |
| 8689 chr1 manual_curation mRNA 24517973 24521901 . + . ID=GSCOCT00030124001;Parent=GSCOCG00030124001;Name=Cc01_g07040 | |
| 8690 chr1 manual_curation polypeptide 24517973 24521901 . + . ID=GSCOCP00030124001;Dbxref=InterPro:IPR004314,PFAM:PF03080,TAIR:AT1G55360.1,TAIR:AT3G13510.1,TAIR:AT5G56530.1,TrEMBL:C6TNI0,TrEMBL:I1K482,TrEMBL:I1KSP0;Derives_from=GSCOCT00030124001;Name=Cc01_g07040;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030124001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(1625313..1625423%2C1627568..1627729%2C1627845..1627898%2C1628158..1628304%2C1628939..1629241);owner=coffea | |
| 8691 chr1 manual_curation exon 24517973 24518083 . + . Parent=GSCOCT00030124001 | |
| 8692 chr1 manual_curation exon 24520228 24520389 . + . Parent=GSCOCT00030124001 | |
| 8693 chr1 manual_curation exon 24520505 24520558 . + . Parent=GSCOCT00030124001 | |
| 8694 chr1 manual_curation exon 24520818 24520964 . + . Parent=GSCOCT00030124001 | |
| 8695 chr1 manual_curation exon 24521599 24521901 . + . Parent=GSCOCT00030124001 | |
| 8696 chr1 manual_curation CDS 24517973 24518083 . + 0 Parent=GSCOCT00030124001 | |
| 8697 chr1 manual_curation CDS 24520228 24520389 . + 0 Parent=GSCOCT00030124001 | |
| 8698 chr1 manual_curation CDS 24520505 24520558 . + 0 Parent=GSCOCT00030124001 | |
| 8699 chr1 manual_curation CDS 24520818 24520964 . + 0 Parent=GSCOCT00030124001 | |
| 8700 chr1 manual_curation CDS 24521599 24521901 . + 0 Parent=GSCOCT00030124001 | |
| 8701 chr1 manual_curation gene 24562950 24565265 . + . ID=GSCOCG00030125001;Name=Cc01_g07050 | |
| 8702 chr1 manual_curation mRNA 24562950 24565265 . + . ID=GSCOCT00030125001;Parent=GSCOCG00030125001;Name=Cc01_g07050 | |
| 8703 chr1 manual_curation polypeptide 24562950 24565214 . + . ID=GSCOCP00030125001;Dbxref=InterPro:IPR004314,PFAM:PF03080,TAIR:AT1G55360.1,TAIR:AT3G13510.1,TAIR:AT5G56530.1,TrEMBL:B9T0D6,TrEMBL:D7SSN3,TrEMBL:I1KTU3;Derives_from=GSCOCT00030125001;Name=Cc01_g07050;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of Unknown Function (DUF239),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030125001~ Protein of Unknown Function (DUF239)~ unknown_gene~ complete;original_location=join(1670290..1670379%2C1670569..1670655%2C1670738..1670959%2C1671506..1671667%2C1671765..1671818%2C1671921..1672067%2C1672177..1672554);owner=coffea | |
| 8704 chr1 manual_curation exon 24562950 24563039 . + . Parent=GSCOCT00030125001 | |
| 8705 chr1 manual_curation exon 24563229 24563315 . + . Parent=GSCOCT00030125001 | |
| 8706 chr1 manual_curation exon 24563398 24563619 . + . Parent=GSCOCT00030125001 | |
| 8707 chr1 manual_curation exon 24564166 24564327 . + . Parent=GSCOCT00030125001 | |
| 8708 chr1 manual_curation exon 24564425 24564478 . + . Parent=GSCOCT00030125001 | |
| 8709 chr1 manual_curation exon 24564581 24564727 . + . Parent=GSCOCT00030125001 | |
| 8710 chr1 manual_curation exon 24564837 24565265 . + . Parent=GSCOCT00030125001 | |
| 8711 chr1 manual_curation CDS 24562950 24563039 . + 0 Parent=GSCOCT00030125001 | |
| 8712 chr1 manual_curation CDS 24563229 24563315 . + 0 Parent=GSCOCT00030125001 | |
| 8713 chr1 manual_curation CDS 24563398 24563619 . + 0 Parent=GSCOCT00030125001 | |
| 8714 chr1 manual_curation CDS 24564166 24564327 . + 0 Parent=GSCOCT00030125001 | |
| 8715 chr1 manual_curation CDS 24564425 24564478 . + 0 Parent=GSCOCT00030125001 | |
| 8716 chr1 manual_curation CDS 24564581 24564727 . + 0 Parent=GSCOCT00030125001 | |
| 8717 chr1 manual_curation CDS 24564837 24565214 . + 0 Parent=GSCOCT00030125001 | |
| 8718 chr1 manual_curation gene 24594624 24595142 . - . ID=GSCOCG00030126001;Name=Cc01_g07060 | |
| 8719 chr1 manual_curation mRNA 24594624 24595142 . - . ID=GSCOCT00030126001;Parent=GSCOCG00030126001;Name=Cc01_g07060 | |
| 8720 chr1 manual_curation polypeptide 24594624 24595142 . - . ID=GSCOCP00030126001;Dbxref=GENE3D:G3DSA:1.10.620.20,InterPro:IPR000358,InterPro:IPR001401,InterPro:IPR009078,InterPro:IPR012348,InterPro:IPR019762,InterPro:IPR022812,PANTHER:PTHR23409,PFAM:PF00268,PFAM:PF00350,PRINTS:PR00195,PROSITE:PS00410,SUPERFAMILY:SSF47240,SwissProt:P42521,SwissProt:Q6Y657,TAIR:AT3G23580.1,TAIR:AT3G27060.1,TAIR:AT4G33650.2,TrEMBL:B4FAZ9,TrEMBL:I1PZ55,TrEMBL:Q5VRJ6;Derives_from=GSCOCT00030126001;Name=Cc01_g07060;Ontology_term=CC_evidence_code:ISS,GO:0003924,GO:0004748,GO:0005525,GO:0009186,GO:0016491,GO:0046914,GO:0055114,CC_EC_number:1.17.4.1,CC_EC_number:1.17.4.1,PRODUCT:Putative Ribonucleoside-diphosphate reductase small subunit,CC_functional_completeness:fragment,CC_gene:rnrB-1,CC_gene:RNR2B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030126001~ Putative Ribonucleoside-diphosphate reductase small subunit~ rnrB-1~ fragment;original_location=complement(join(1702409..1702482%2C1701964..1702345));owner=coffea | |
| 8721 chr1 manual_curation exon 24594624 24595005 . - . Parent=GSCOCT00030126001 | |
| 8722 chr1 manual_curation exon 24595069 24595142 . - . Parent=GSCOCT00030126001 | |
| 8723 chr1 manual_curation CDS 24594624 24595005 . - 2 Parent=GSCOCT00030126001 | |
| 8724 chr1 manual_curation CDS 24595069 24595142 . - 0 Parent=GSCOCT00030126001 | |
| 8725 chr1 manual_curation gene 24596147 24598881 . + . ID=GSCOCG00030127001;Name=Cc01_g07070 | |
| 8726 chr1 manual_curation mRNA 24596147 24598881 . + . ID=GSCOCT00030127001;Parent=GSCOCG00030127001;Name=Cc01_g07070 | |
| 8727 chr1 manual_curation polypeptide 24596212 24598653 . + . ID=GSCOCP00030127001;Dbxref=InterPro:IPR004314,PFAM:PF03080,TAIR:AT1G55360.1,TAIR:AT3G13510.1,TAIR:AT5G56530.1,TrEMBL:D7SSN3,TrEMBL:I1KTU3,TrEMBL:I1KTU4;Derives_from=GSCOCT00030127001;Name=Cc01_g07070;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of Unknown Function (DUF239),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030127001~ Putative Protein of Unknown Function (DUF239)~ unknown_gene~ complete;original_location=join(1703552..1703674%2C1703945..1704031%2C1704165..1704386%2C1704927..1705088%2C1705204..1705257%2C1705360..1705506%2C1705616..1705993);owner=coffea | |
| 8728 chr1 manual_curation exon 24596147 24596334 . + . Parent=GSCOCT00030127001 | |
| 8729 chr1 manual_curation exon 24596605 24596691 . + . Parent=GSCOCT00030127001 | |
| 8730 chr1 manual_curation exon 24596825 24597046 . + . Parent=GSCOCT00030127001 | |
| 8731 chr1 manual_curation exon 24597587 24597748 . + . Parent=GSCOCT00030127001 | |
| 8732 chr1 manual_curation exon 24597864 24597917 . + . Parent=GSCOCT00030127001 | |
| 8733 chr1 manual_curation exon 24598020 24598166 . + . Parent=GSCOCT00030127001 | |
| 8734 chr1 manual_curation exon 24598276 24598881 . + . Parent=GSCOCT00030127001 | |
| 8735 chr1 manual_curation CDS 24596212 24596334 . + 0 Parent=GSCOCT00030127001 | |
| 8736 chr1 manual_curation CDS 24596605 24596691 . + 0 Parent=GSCOCT00030127001 | |
| 8737 chr1 manual_curation CDS 24596825 24597046 . + 0 Parent=GSCOCT00030127001 | |
| 8738 chr1 manual_curation CDS 24597587 24597748 . + 0 Parent=GSCOCT00030127001 | |
| 8739 chr1 manual_curation CDS 24597864 24597917 . + 0 Parent=GSCOCT00030127001 | |
| 8740 chr1 manual_curation CDS 24598020 24598166 . + 0 Parent=GSCOCT00030127001 | |
| 8741 chr1 manual_curation CDS 24598276 24598653 . + 0 Parent=GSCOCT00030127001 | |
| 8742 chr1 manual_curation gene 24687315 24689112 . + . ID=GSCOCG00030128001;Name=Cc01_g07080 | |
| 8743 chr1 manual_curation mRNA 24687315 24689112 . + . ID=GSCOCT00030128001;Parent=GSCOCG00030128001;Name=Cc01_g07080 | |
| 8744 chr1 manual_curation polypeptide 24687315 24689112 . + . ID=GSCOCP00030128001;Dbxref=InterPro:IPR004314,PFAM:PF03080,TAIR:AT2G44210.2,TAIR:AT3G13510.1,TAIR:AT5G56530.1,TrEMBL:A5BPH6,TrEMBL:B9T0D6,TrEMBL:D7SSN3;Derives_from=GSCOCT00030128001;Name=Cc01_g07080;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of Unknown Function (DUF239),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030128001~ Protein of Unknown Function (DUF239)~ unknown_gene~ complete;original_location=join(1794655..1794816%2C1794928..1795071%2C1795400..1795561%2C1795677..1795730%2C1795816..1795962%2C1796075..1796452);owner=coffea | |
| 8745 chr1 manual_curation exon 24687315 24687476 . + . Parent=GSCOCT00030128001 | |
| 8746 chr1 manual_curation exon 24687588 24687731 . + . Parent=GSCOCT00030128001 | |
| 8747 chr1 manual_curation exon 24688060 24688221 . + . Parent=GSCOCT00030128001 | |
| 8748 chr1 manual_curation exon 24688337 24688390 . + . Parent=GSCOCT00030128001 | |
| 8749 chr1 manual_curation exon 24688476 24688622 . + . Parent=GSCOCT00030128001 | |
| 8750 chr1 manual_curation exon 24688735 24689112 . + . Parent=GSCOCT00030128001 | |
| 8751 chr1 manual_curation CDS 24687315 24687476 . + 0 Parent=GSCOCT00030128001 | |
| 8752 chr1 manual_curation CDS 24687588 24687731 . + 0 Parent=GSCOCT00030128001 | |
| 8753 chr1 manual_curation CDS 24688060 24688221 . + 0 Parent=GSCOCT00030128001 | |
| 8754 chr1 manual_curation CDS 24688337 24688390 . + 0 Parent=GSCOCT00030128001 | |
| 8755 chr1 manual_curation CDS 24688476 24688622 . + 0 Parent=GSCOCT00030128001 | |
| 8756 chr1 manual_curation CDS 24688735 24689112 . + 0 Parent=GSCOCT00030128001 | |
| 8757 chr1 manual_curation gene 24707889 24710992 . + . ID=GSCOCG00030131001;Name=Cc01_g07090 | |
| 8758 chr1 manual_curation mRNA 24707889 24710992 . + . ID=GSCOCT00030131001;Parent=GSCOCG00030131001;Name=Cc01_g07090 | |
| 8759 chr1 manual_curation polypeptide 24708070 24710701 . + . ID=GSCOCP00030131001;Dbxref=GENE3D:G3DSA:3.30.70.60,InterPro:IPR001326,InterPro:IPR010987,InterPro:IPR014038,InterPro:IPR014717,PFAM:PF00736,PROSITE:PS00824,PROSITE:PS00825,SMART:SM00888,SUPERFAMILY:SSF47616,SUPERFAMILY:SSF54984,SwissProt:P29545,SwissProt:Q84WM9,SwissProt:Q9SCX3,TAIR:AT1G30230.2,TAIR:AT5G12110.1,TAIR:AT5G19510.1,TrEMBL:C6SY42,TrEMBL:I1LWB8,TrEMBL:Q3HVL1;Derives_from=GSCOCT00030131001;Name=Cc01_g07090;Ontology_term=CC_evidence_code:ISS,GO:0003746,GO:0005853,GO:0006414,CC_EC_number:missing_EC_number,PRODUCT:Elongation factor 1-beta 1,CC_functional_completeness:complete,CC_gene:At5g12110,CC_gene:At5g19510,CC_gene:Os07g0662500;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030131001~ Elongation factor 1-beta 1~ At5g12110~ complete;original_location=join(1815410..1815495%2C1815602..1815721%2C1815940..1816015%2C1817225..1817342%2C1817670..1817783%2C1817878..1818041);owner=coffea | |
| 8760 chr1 manual_curation exon 24707889 24708155 . + . Parent=GSCOCT00030131001 | |
| 8761 chr1 manual_curation exon 24708262 24708381 . + . Parent=GSCOCT00030131001 | |
| 8762 chr1 manual_curation exon 24708600 24708675 . + . Parent=GSCOCT00030131001 | |
| 8763 chr1 manual_curation exon 24709885 24710002 . + . Parent=GSCOCT00030131001 | |
| 8764 chr1 manual_curation exon 24710330 24710443 . + . Parent=GSCOCT00030131001 | |
| 8765 chr1 manual_curation exon 24710538 24710992 . + . Parent=GSCOCT00030131001 | |
| 8766 chr1 manual_curation CDS 24708070 24708155 . + 0 Parent=GSCOCT00030131001 | |
| 8767 chr1 manual_curation CDS 24708262 24708381 . + 2 Parent=GSCOCT00030131001 | |
| 8768 chr1 manual_curation CDS 24708600 24708675 . + 2 Parent=GSCOCT00030131001 | |
| 8769 chr1 manual_curation CDS 24709885 24710002 . + 0 Parent=GSCOCT00030131001 | |
| 8770 chr1 manual_curation CDS 24710330 24710443 . + 1 Parent=GSCOCT00030131001 | |
| 8771 chr1 manual_curation CDS 24710538 24710701 . + 1 Parent=GSCOCT00030131001 | |
| 8772 chr1 manual_curation gene 24732277 24736253 . + . ID=GSCOCG00030133001;Name=Cc01_g07100 | |
| 8773 chr1 manual_curation mRNA 24732277 24736253 . + . ID=GSCOCT00030133001;Parent=GSCOCG00030133001;Name=Cc01_g07100 | |
| 8774 chr1 manual_curation polypeptide 24732982 24735980 . + . ID=GSCOCP00030133001;Dbxref=InterPro:IPR008501,InterPro:IPR018018,PANTHER:PTHR14854,PFAM:PF05615,SwissProt:Q6DGZ3,SwissProt:Q6I9Y2,SwissProt:Q7SZ78,TAIR:AT3G02950.1,TAIR:AT5G16790.1,TrEMBL:B9S239,TrEMBL:D7T1C3,TrEMBL:Q6L4C3;Derives_from=GSCOCT00030133001;Name=Cc01_g07100;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative THO complex subunit 7 homolog,CC_functional_completeness:complete,CC_gene:thoc7,CC_gene:THOC7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030133001~ Putative THO complex subunit 7 homolog~ thoc7~ complete;original_location=join(1840322..1840915%2C1843189..1843320);owner=coffea | |
| 8775 chr1 manual_curation exon 24732277 24732457 . + . Parent=GSCOCT00030133001 | |
| 8776 chr1 manual_curation exon 24732951 24733575 . + . Parent=GSCOCT00030133001 | |
| 8777 chr1 manual_curation exon 24735849 24736253 . + . Parent=GSCOCT00030133001 | |
| 8778 chr1 manual_curation CDS 24732982 24733575 . + 0 Parent=GSCOCT00030133001 | |
| 8779 chr1 manual_curation CDS 24735849 24735980 . + 0 Parent=GSCOCT00030133001 | |
| 8780 chr1 manual_curation gene 24747236 24749385 . + . ID=GSCOCG00030134001;Name=Cc01_g07110 | |
| 8781 chr1 manual_curation mRNA 24747236 24749385 . + . ID=GSCOCT00030134001;Parent=GSCOCG00030134001;Name=Cc01_g07110 | |
| 8782 chr1 manual_curation polypeptide 24748174 24748447 . + . ID=GSCOCP00030134001;Dbxref=TAIR:AT3G56580.2;Derives_from=GSCOCT00030134001;Name=Cc01_g07110;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030134001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(1855514..1855684%2C1855698..1855787);owner=coffea | |
| 8783 chr1 manual_curation exon 24747236 24747378 . + . Parent=GSCOCT00030134001 | |
| 8784 chr1 manual_curation exon 24748112 24748344 . + . Parent=GSCOCT00030134001 | |
| 8785 chr1 manual_curation exon 24748358 24749385 . + . Parent=GSCOCT00030134001 | |
| 8786 chr1 manual_curation CDS 24748174 24748344 . + 0 Parent=GSCOCT00030134001 | |
| 8787 chr1 manual_curation CDS 24748358 24748447 . + 0 Parent=GSCOCT00030134001 | |
| 8788 chr1 manual_curation gene 24751691 24756409 . + . ID=GSCOCG00030135001;Name=Cc01_g07120 | |
| 8789 chr1 manual_curation mRNA 24751691 24756409 . + . ID=GSCOCT00030135001;Parent=GSCOCG00030135001;Name=Cc01_g07120 | |
| 8790 chr1 manual_curation polypeptide 24751956 24756169 . + . ID=GSCOCP00030135001;Dbxref=InterPro:IPR002523,PFAM:PF01544,SwissProt:A2WY50,SwissProt:Q8L4S2,SwissProt:Q9LJN2,TAIR:AT1G16010.2,TAIR:AT1G80900.1,TAIR:AT3G19640.1,TrEMBL:B9HN14,TrEMBL:B9S826,TrEMBL:F6H692;Derives_from=GSCOCT00030135001;Name=Cc01_g07120;Ontology_term=CC_evidence_code:ISS,GO:0016020,GO:0030001,GO:0046873,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Magnesium transporter MRS2-3,CC_functional_completeness:complete,CC_gene:MRS2-3,CC_gene:MRS2-F;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030135001~ Magnesium transporter MRS2-3~ MRS2-3~ complete;original_location=join(1859296..1859523%2C1860790..1861008%2C1861105..1861233%2C1861729..1861892%2C1861997..1862243%2C1863222..1863509);owner=coffea | |
| 8791 chr1 manual_curation exon 24751691 24752183 . + . Parent=GSCOCT00030135001 | |
| 8792 chr1 manual_curation exon 24753450 24753668 . + . Parent=GSCOCT00030135001 | |
| 8793 chr1 manual_curation exon 24753765 24753893 . + . Parent=GSCOCT00030135001 | |
| 8794 chr1 manual_curation exon 24754389 24754552 . + . Parent=GSCOCT00030135001 | |
| 8795 chr1 manual_curation exon 24754657 24754903 . + . Parent=GSCOCT00030135001 | |
| 8796 chr1 manual_curation exon 24755882 24756409 . + . Parent=GSCOCT00030135001 | |
| 8797 chr1 manual_curation CDS 24751956 24752183 . + 0 Parent=GSCOCT00030135001 | |
| 8798 chr1 manual_curation CDS 24753450 24753668 . + 0 Parent=GSCOCT00030135001 | |
| 8799 chr1 manual_curation CDS 24753765 24753893 . + 0 Parent=GSCOCT00030135001 | |
| 8800 chr1 manual_curation CDS 24754389 24754552 . + 0 Parent=GSCOCT00030135001 | |
| 8801 chr1 manual_curation CDS 24754657 24754903 . + 2 Parent=GSCOCT00030135001 | |
| 8802 chr1 manual_curation CDS 24755882 24756169 . + 0 Parent=GSCOCT00030135001 | |
| 8803 chr1 manual_curation gene 24762575 24770559 . - . ID=GSCOCG00030138001;Name=Cc01_g07130 | |
| 8804 chr1 manual_curation mRNA 24762575 24770559 . - . ID=GSCOCT00030138001;Parent=GSCOCG00030138001;Name=Cc01_g07130 | |
| 8805 chr1 manual_curation polypeptide 24762729 24770559 . - . ID=GSCOCP00030138001;Dbxref=InterPro:IPR018227,PFAM:PF03222,SwissProt:P0AAD4,SwissProt:P0AAD5,SwissProt:P44747,TAIR:AT2G33260.1,TAIR:AT5G19500.1,TrEMBL:B9GEN1,TrEMBL:B9SB46,TrEMBL:F6HAD9;Derives_from=GSCOCT00030138001;Name=Cc01_g07130;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Tyrosine-specific transport protein,CC_functional_completeness:modules,CC_gene:tyrP,CC_gene:tyrP-B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030138001~ Putative Tyrosine-specific transport protein~ tyrP~ modules;original_location=complement(join(1877668..1877899%2C1877460..1877500%2C1877066..1877158%2C1876693..1876767%2C1876079..1876128%2C1874956..1875017%2C1874101..1874185%2C1873448..1873517%2C1872715..1872816%2C1872573..1872625%2C1871474..1871624%2C1871278..1871362%2C1870475..1870603%2C1870069..1870253));owner=coffea | |
| 8806 chr1 manual_curation exon 24762575 24762913 . - . Parent=GSCOCT00030138001 | |
| 8807 chr1 manual_curation exon 24763135 24763263 . - . Parent=GSCOCT00030138001 | |
| 8808 chr1 manual_curation exon 24763938 24764022 . - . Parent=GSCOCT00030138001 | |
| 8809 chr1 manual_curation exon 24764134 24764284 . - . Parent=GSCOCT00030138001 | |
| 8810 chr1 manual_curation exon 24765233 24765285 . - . Parent=GSCOCT00030138001 | |
| 8811 chr1 manual_curation exon 24765375 24765476 . - . Parent=GSCOCT00030138001 | |
| 8812 chr1 manual_curation exon 24766108 24766177 . - . Parent=GSCOCT00030138001 | |
| 8813 chr1 manual_curation exon 24766761 24766845 . - . Parent=GSCOCT00030138001 | |
| 8814 chr1 manual_curation exon 24767616 24767677 . - . Parent=GSCOCT00030138001 | |
| 8815 chr1 manual_curation exon 24768739 24768788 . - . Parent=GSCOCT00030138001 | |
| 8816 chr1 manual_curation exon 24769353 24769427 . - . Parent=GSCOCT00030138001 | |
| 8817 chr1 manual_curation exon 24769726 24769818 . - . Parent=GSCOCT00030138001 | |
| 8818 chr1 manual_curation exon 24770120 24770160 . - . Parent=GSCOCT00030138001 | |
| 8819 chr1 manual_curation exon 24770328 24770559 . - . Parent=GSCOCT00030138001 | |
| 8820 chr1 manual_curation CDS 24762729 24762913 . - 1 Parent=GSCOCT00030138001 | |
| 8821 chr1 manual_curation CDS 24763135 24763263 . - 1 Parent=GSCOCT00030138001 | |
| 8822 chr1 manual_curation CDS 24763938 24764022 . - 0 Parent=GSCOCT00030138001 | |
| 8823 chr1 manual_curation CDS 24764134 24764284 . - 2 Parent=GSCOCT00030138001 | |
| 8824 chr1 manual_curation CDS 24765233 24765285 . - 0 Parent=GSCOCT00030138001 | |
| 8825 chr1 manual_curation CDS 24765375 24765476 . - 0 Parent=GSCOCT00030138001 | |
| 8826 chr1 manual_curation CDS 24766108 24766177 . - 2 Parent=GSCOCT00030138001 | |
| 8827 chr1 manual_curation CDS 24766761 24766845 . - 1 Parent=GSCOCT00030138001 | |
| 8828 chr1 manual_curation CDS 24767616 24767677 . - 2 Parent=GSCOCT00030138001 | |
| 8829 chr1 manual_curation CDS 24768739 24768788 . - 0 Parent=GSCOCT00030138001 | |
| 8830 chr1 manual_curation CDS 24769353 24769427 . - 0 Parent=GSCOCT00030138001 | |
| 8831 chr1 manual_curation CDS 24769726 24769818 . - 0 Parent=GSCOCT00030138001 | |
| 8832 chr1 manual_curation CDS 24770120 24770160 . - 1 Parent=GSCOCT00030138001 | |
| 8833 chr1 manual_curation CDS 24770328 24770559 . - 0 Parent=GSCOCT00030138001 | |
| 8834 chr1 manual_curation gene 24789842 24796984 . + . ID=GSCOCG00030139001;Name=Cc01_g07140 | |
| 8835 chr1 manual_curation mRNA 24789842 24796984 . + . ID=GSCOCT00030139001;Parent=GSCOCG00030139001;Name=Cc01_g07140 | |
| 8836 chr1 manual_curation polypeptide 24789972 24796679 . + . ID=GSCOCP00030139001;Dbxref=GENE3D:G3DSA:3.30.230.10,HAMAP:MF_00061,InterPro:IPR004424,InterPro:IPR006204,InterPro:IPR014721,InterPro:IPR020568,PANTHER:PTHR20861:SF2,PFAM:PF00288,SUPERFAMILY:SSF54211,SwissProt:P56848,SwissProt:P93841,SwissProt:Q8S2G0,TAIR:AT2G26930.1,TIGRFAMs:TIGR00154,TrEMBL:A5A5H5,TrEMBL:B4UUI7,TrEMBL:D7T1C6;Derives_from=GSCOCT00030139001;Name=Cc01_g07140;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0016114,GO:0016301,GO:0016310,GO:0050515,CC_EC_number:2.7.1.148,PRODUCT:4-diphosphocytidyl-2-C-methyl-D-erythritol kinase%2C chloroplastic/chromoplastic (Fragment),CC_functional_completeness:complete,CC_gene:ISPE;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030139001~ 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase%2C chloroplastic/chromoplastic (Fragment)~ ISPE~ complete;original_location=join(1897312..1897527%2C1897626..1897721%2C1897820..1897888%2C1898114..1898218%2C1898305..1898361%2C1898458..1898658%2C1898999..1899091%2C1899174..1899273%2C1900137..1900236%2C1903237..1903322%2C1903919..1904019);owner=coffea | |
| 8837 chr1 manual_curation exon 24789842 24790187 . + . Parent=GSCOCT00030139001 | |
| 8838 chr1 manual_curation exon 24790286 24790381 . + . Parent=GSCOCT00030139001 | |
| 8839 chr1 manual_curation exon 24790480 24790548 . + . Parent=GSCOCT00030139001 | |
| 8840 chr1 manual_curation exon 24790774 24790878 . + . Parent=GSCOCT00030139001 | |
| 8841 chr1 manual_curation exon 24790965 24791021 . + . Parent=GSCOCT00030139001 | |
| 8842 chr1 manual_curation exon 24791118 24791318 . + . Parent=GSCOCT00030139001 | |
| 8843 chr1 manual_curation exon 24791659 24791751 . + . Parent=GSCOCT00030139001 | |
| 8844 chr1 manual_curation exon 24791834 24791933 . + . Parent=GSCOCT00030139001 | |
| 8845 chr1 manual_curation exon 24792797 24792896 . + . Parent=GSCOCT00030139001 | |
| 8846 chr1 manual_curation exon 24795897 24795982 . + . Parent=GSCOCT00030139001 | |
| 8847 chr1 manual_curation exon 24796579 24796984 . + . Parent=GSCOCT00030139001 | |
| 8848 chr1 manual_curation CDS 24789972 24790187 . + 0 Parent=GSCOCT00030139001 | |
| 8849 chr1 manual_curation CDS 24790286 24790381 . + 0 Parent=GSCOCT00030139001 | |
| 8850 chr1 manual_curation CDS 24790480 24790548 . + 0 Parent=GSCOCT00030139001 | |
| 8851 chr1 manual_curation CDS 24790774 24790878 . + 0 Parent=GSCOCT00030139001 | |
| 8852 chr1 manual_curation CDS 24790965 24791021 . + 0 Parent=GSCOCT00030139001 | |
| 8853 chr1 manual_curation CDS 24791118 24791318 . + 0 Parent=GSCOCT00030139001 | |
| 8854 chr1 manual_curation CDS 24791659 24791751 . + 0 Parent=GSCOCT00030139001 | |
| 8855 chr1 manual_curation CDS 24791834 24791933 . + 0 Parent=GSCOCT00030139001 | |
| 8856 chr1 manual_curation CDS 24792797 24792896 . + 1 Parent=GSCOCT00030139001 | |
| 8857 chr1 manual_curation CDS 24795897 24795982 . + 2 Parent=GSCOCT00030139001 | |
| 8858 chr1 manual_curation CDS 24796579 24796679 . + 1 Parent=GSCOCT00030139001 | |
| 8859 chr1 manual_curation gene 24797670 24802028 . - . ID=GSCOCG00030140001;Name=Cc01_g07150 | |
| 8860 chr1 manual_curation mRNA 24797670 24802028 . - . ID=GSCOCT00030140001;Parent=GSCOCG00030140001;Name=Cc01_g07150 | |
| 8861 chr1 manual_curation polypeptide 24797670 24800869 . - . ID=GSCOCP00030140001;Dbxref=InterPro:IPR000449,InterPro:IPR009060,InterPro:IPR015940,PFAM:PF00627,PROFILE:PS50030,SUPERFAMILY:SSF46934,TAIR:AT2G26920.1,TAIR:AT5G12120.1,TrEMBL:B9HPT6,TrEMBL:B9SB48,TrEMBL:F6HAD9;Derives_from=GSCOCT00030140001;Name=Cc01_g07150;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Ubiquitin-associated/translation elongation factor EF1B protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030140001~ Putative Ubiquitin-associated/translation elongation factor EF1B protein~ unknown_gene~ complete;original_location=complement(join(1908167..1908209%2C1908035..1908048%2C1905169..1907001%2C1905010..1905126));owner=coffea | |
| 8862 chr1 manual_curation exon 24797670 24797786 . - . Parent=GSCOCT00030140001 | |
| 8863 chr1 manual_curation exon 24797829 24799661 . - . Parent=GSCOCT00030140001 | |
| 8864 chr1 manual_curation exon 24800695 24800708 . - . Parent=GSCOCT00030140001 | |
| 8865 chr1 manual_curation exon 24800827 24802028 . - . Parent=GSCOCT00030140001 | |
| 8866 chr1 manual_curation CDS 24797670 24797786 . - 0 Parent=GSCOCT00030140001 | |
| 8867 chr1 manual_curation CDS 24797829 24799661 . - 0 Parent=GSCOCT00030140001 | |
| 8868 chr1 manual_curation CDS 24800695 24800708 . - 1 Parent=GSCOCT00030140001 | |
| 8869 chr1 manual_curation CDS 24800827 24800869 . - 0 Parent=GSCOCT00030140001 | |
| 8870 chr1 manual_curation gene 24828256 24832400 . + . ID=GSCOCG00030141001;Name=Cc01_g07160 | |
| 8871 chr1 manual_curation mRNA 24828256 24832400 . + . ID=GSCOCT00030141001;Parent=GSCOCG00030141001;Name=Cc01_g07160 | |
| 8872 chr1 manual_curation polypeptide 24828428 24831235 . + . ID=GSCOCP00030141001;Dbxref=GENE3D:G3DSA:1.10.20.10,InterPro:IPR003958,InterPro:IPR009072,PFAM:PF00808,SUPERFAMILY:SSF47113,SwissProt:A0JPP1,SwissProt:Q14919,SwissProt:Q2YDP3,TAIR:AT3G12480.1,TAIR:AT5G19490.1,TrEMBL:A5AHH6,TrEMBL:B9SB51,TrEMBL:D7T1D7;Derives_from=GSCOCT00030141001;Name=Cc01_g07160;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0005622,GO:0043565,CC_EC_number:missing_EC_number,PRODUCT:Putative nuclear factor Y%2C subunit C11,CC_functional_completeness:complete,CC_gene:Drap1,CC_gene:DRAP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030141001~ Putative nuclear factor Y%2C subunit C11~ Drap1~ complete;original_location=join(1935768..1935800%2C1937020..1937092%2C1937248..1937341%2C1937452..1937565%2C1937657..1937714%2C1938108..1938575);owner=coffea | |
| 8873 chr1 manual_curation exon 24828256 24828460 . + . Parent=GSCOCT00030141001 | |
| 8874 chr1 manual_curation exon 24829680 24829752 . + . Parent=GSCOCT00030141001 | |
| 8875 chr1 manual_curation exon 24829908 24830001 . + . Parent=GSCOCT00030141001 | |
| 8876 chr1 manual_curation exon 24830112 24830225 . + . Parent=GSCOCT00030141001 | |
| 8877 chr1 manual_curation exon 24830317 24830374 . + . Parent=GSCOCT00030141001 | |
| 8878 chr1 manual_curation exon 24830768 24832400 . + . Parent=GSCOCT00030141001 | |
| 8879 chr1 manual_curation CDS 24828428 24828460 . + 0 Parent=GSCOCT00030141001 | |
| 8880 chr1 manual_curation CDS 24829680 24829752 . + 0 Parent=GSCOCT00030141001 | |
| 8881 chr1 manual_curation CDS 24829908 24830001 . + 1 Parent=GSCOCT00030141001 | |
| 8882 chr1 manual_curation CDS 24830112 24830225 . + 2 Parent=GSCOCT00030141001 | |
| 8883 chr1 manual_curation CDS 24830317 24830374 . + 2 Parent=GSCOCT00030141001 | |
| 8884 chr1 manual_curation CDS 24830768 24831235 . + 0 Parent=GSCOCT00030141001 | |
| 8885 chr1 manual_curation gene 24833586 24835085 . - . ID=GSCOCG00030143001;Name=Cc01_g07170 | |
| 8886 chr1 manual_curation mRNA 24833586 24835085 . - . ID=GSCOCT00030143001;Parent=GSCOCG00030143001;Name=Cc01_g07170 | |
| 8887 chr1 manual_curation polypeptide 24833826 24834747 . - . ID=GSCOCP00030143001;Dbxref=InterPro:IPR000010,InterPro:IPR018073,InterPro:IPR020381,PFAM:PF00031,PRODOM:PD001231,PROSITE:PS00287,SMART:SM00043,SwissProt:Q06445,SwissProt:Q41906,SwissProt:Q8H0X6,TAIR:AT2G40880.1,TAIR:AT3G12490.2,TAIR:AT5G05110.1,TrEMBL:B9GEN9,TrEMBL:B9SB56,TrEMBL:G4Y626;Derives_from=GSCOCT00030143001;Name=Cc01_g07170;Ontology_term=CC_evidence_code:ISS,GO:0004869,CC_EC_number:missing_EC_number,PRODUCT:Cysteine proteinase inhibitor 6,CC_functional_completeness:fragment,CC_gene:CYS6,CC_gene:CYS3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030143001~ Cysteine proteinase inhibitor 6~ CYS6~ fragment;original_location=complement(join(1941986..1942087%2C1941166..1941360));owner=coffea | |
| 8888 chr1 manual_curation exon 24833586 24834020 . - . Parent=GSCOCT00030143001 | |
| 8889 chr1 manual_curation exon 24834646 24835085 . - . Parent=GSCOCT00030143001 | |
| 8890 chr1 manual_curation CDS 24833826 24834020 . - 0 Parent=GSCOCT00030143001 | |
| 8891 chr1 manual_curation CDS 24834646 24834747 . - 0 Parent=GSCOCT00030143001 | |
| 8892 chr1 manual_curation gene 24837903 24846218 . + . ID=GSCOCG00030144001;Name=Cc01_g07180 | |
| 8893 chr1 manual_curation mRNA 24837903 24846218 . + . ID=GSCOCT00030144001;Parent=GSCOCG00030144001;Name=Cc01_g07180 | |
| 8894 chr1 manual_curation polypeptide 24837903 24845974 . + . ID=GSCOCP00030144001;Dbxref=InterPro:IPR013946,PFAM:PF08637,SwissProt:O74963,SwissProt:Q55GJ3,TAIR:AT5G12290.1,TrEMBL:B9SB58,TrEMBL:F6HAF6,TrEMBL:G7KCS4;Derives_from=GSCOCT00030144001;Name=Cc01_g07180;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:dgd1 suppressor 1,CC_functional_completeness:complete,CC_gene:nca2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030144001~ dgd1 suppressor 1~ nca2~ complete;original_location=join(1945243..1945541%2C1945933..1946047%2C1946133..1946336%2C1947794..1947931%2C1948034..1948195%2C1948560..1948754%2C1950598..1950698%2C1950782..1950871%2C1951257..1951312%2C1951387..1951432%2C1951562..1951685%2C1952003..1952113%2C1952908..1953008%2C1953194..1953314);owner=coffea | |
| 8895 chr1 manual_curation exon 24837903 24838201 . + . Parent=GSCOCT00030144001 | |
| 8896 chr1 manual_curation exon 24838593 24838707 . + . Parent=GSCOCT00030144001 | |
| 8897 chr1 manual_curation exon 24838793 24838996 . + . Parent=GSCOCT00030144001 | |
| 8898 chr1 manual_curation exon 24840454 24840591 . + . Parent=GSCOCT00030144001 | |
| 8899 chr1 manual_curation exon 24840694 24840855 . + . Parent=GSCOCT00030144001 | |
| 8900 chr1 manual_curation exon 24841220 24841414 . + . Parent=GSCOCT00030144001 | |
| 8901 chr1 manual_curation exon 24843258 24843358 . + . Parent=GSCOCT00030144001 | |
| 8902 chr1 manual_curation exon 24843442 24843531 . + . Parent=GSCOCT00030144001 | |
| 8903 chr1 manual_curation exon 24843917 24843972 . + . Parent=GSCOCT00030144001 | |
| 8904 chr1 manual_curation exon 24844047 24844092 . + . Parent=GSCOCT00030144001 | |
| 8905 chr1 manual_curation exon 24844222 24844345 . + . Parent=GSCOCT00030144001 | |
| 8906 chr1 manual_curation exon 24844663 24844773 . + . Parent=GSCOCT00030144001 | |
| 8907 chr1 manual_curation exon 24845568 24845668 . + . Parent=GSCOCT00030144001 | |
| 8908 chr1 manual_curation exon 24845854 24846218 . + . Parent=GSCOCT00030144001 | |
| 8909 chr1 manual_curation CDS 24837903 24838201 . + 0 Parent=GSCOCT00030144001 | |
| 8910 chr1 manual_curation CDS 24838593 24838707 . + 2 Parent=GSCOCT00030144001 | |
| 8911 chr1 manual_curation CDS 24838793 24838996 . + 0 Parent=GSCOCT00030144001 | |
| 8912 chr1 manual_curation CDS 24840454 24840591 . + 0 Parent=GSCOCT00030144001 | |
| 8913 chr1 manual_curation CDS 24840694 24840855 . + 0 Parent=GSCOCT00030144001 | |
| 8914 chr1 manual_curation CDS 24841220 24841414 . + 0 Parent=GSCOCT00030144001 | |
| 8915 chr1 manual_curation CDS 24843258 24843358 . + 0 Parent=GSCOCT00030144001 | |
| 8916 chr1 manual_curation CDS 24843442 24843531 . + 2 Parent=GSCOCT00030144001 | |
| 8917 chr1 manual_curation CDS 24843917 24843972 . + 2 Parent=GSCOCT00030144001 | |
| 8918 chr1 manual_curation CDS 24844047 24844092 . + 1 Parent=GSCOCT00030144001 | |
| 8919 chr1 manual_curation CDS 24844222 24844345 . + 2 Parent=GSCOCT00030144001 | |
| 8920 chr1 manual_curation CDS 24844663 24844773 . + 0 Parent=GSCOCT00030144001 | |
| 8921 chr1 manual_curation CDS 24845568 24845668 . + 0 Parent=GSCOCT00030144001 | |
| 8922 chr1 manual_curation CDS 24845854 24845974 . + 2 Parent=GSCOCT00030144001 | |
| 8923 chr1 manual_curation gene 24875724 24876347 . - . ID=GSCOCG00030145001;Name=Cc01_g07190 | |
| 8924 chr1 manual_curation mRNA 24875724 24876347 . - . ID=GSCOCT00030145001;Parent=GSCOCG00030145001;Name=Cc01_g07190 | |
| 8925 chr1 manual_curation polypeptide 24875724 24876347 . - . ID=GSCOCP00030145001;Dbxref=GENE3D:G3DSA:1.25.40.20,InterPro:IPR002110,InterPro:IPR020683,PROFILE:PS50297,SMART:SM00248,SUPERFAMILY:SSF48403,TAIR:AT4G10720.1,TAIR:AT5G15500.2,TAIR:AT5G54620.1,TrEMBL:B1Q4U3,TrEMBL:G7L8Q1,TrEMBL:I1KDS3;Derives_from=GSCOCT00030145001;Name=Cc01_g07190;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Ankyrin repeat family protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030145001~ Putative Ankyrin repeat family protein~ unknown_gene~ fragment;original_location=complement(1983064..1983687);owner=coffea | |
| 8926 chr1 manual_curation exon 24875724 24876347 . - . Parent=GSCOCT00030145001 | |
| 8927 chr1 manual_curation CDS 24875724 24876347 . - 0 Parent=GSCOCT00030145001 | |
| 8928 chr1 manual_curation gene 24990637 24992205 . - . ID=GSCOCG00030147001;Name=Cc01_g07200 | |
| 8929 chr1 manual_curation mRNA 24990637 24992205 . - . ID=GSCOCT00030147001;Parent=GSCOCG00030147001;Name=Cc01_g07200 | |
| 8930 chr1 manual_curation polypeptide 24990637 24992205 . - . ID=GSCOCP00030147001;Dbxref=GENE3D:G3DSA:1.25.40.20,InterPro:IPR002110,InterPro:IPR020683,PROFILE:PS50088,PROFILE:PS50297,SMART:SM00248,SUPERFAMILY:SSF48403,SwissProt:Q9C7A2,TAIR:AT1G14480.1,TAIR:AT4G10720.1,TAIR:AT5G15500.2,TrEMBL:G7IYT6,TrEMBL:G7L8Q1,TrEMBL:I1KDS3;Derives_from=GSCOCT00030147001;Name=Cc01_g07200;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Ankyrin repeat family protein,CC_functional_completeness:complete,CC_gene:At3g12360;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030147001~ Putative Ankyrin repeat family protein~ At3g12360~ complete;original_location=complement(join(2098961..2099545%2C2097977..2098720));owner=coffea | |
| 8931 chr1 manual_curation exon 24990637 24991380 . - . Parent=GSCOCT00030147001 | |
| 8932 chr1 manual_curation exon 24991621 24992205 . - . Parent=GSCOCT00030147001 | |
| 8933 chr1 manual_curation CDS 24990637 24991380 . - 0 Parent=GSCOCT00030147001 | |
| 8934 chr1 manual_curation CDS 24991621 24992205 . - 0 Parent=GSCOCT00030147001 | |
| 8935 chr1 manual_curation gene 25005621 25007417 . - . ID=GSCOCG00030149001;Name=Cc01_g07210 | |
| 8936 chr1 manual_curation mRNA 25005621 25007417 . - . ID=GSCOCT00030149001;Parent=GSCOCG00030149001;Name=Cc01_g07210 | |
| 8937 chr1 manual_curation polypeptide 25005621 25007417 . - . ID=GSCOCP00030149001;Derives_from=GSCOCT00030149001;Name=Cc01_g07210;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030149001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(2114679..2114757%2C2114375..2114524%2C2113972..2114088%2C2112961..2113277));owner=coffea | |
| 8938 chr1 manual_curation exon 25005621 25005937 . - . Parent=GSCOCT00030149001 | |
| 8939 chr1 manual_curation exon 25006632 25006748 . - . Parent=GSCOCT00030149001 | |
| 8940 chr1 manual_curation exon 25007035 25007184 . - . Parent=GSCOCT00030149001 | |
| 8941 chr1 manual_curation exon 25007339 25007417 . - . Parent=GSCOCT00030149001 | |
| 8942 chr1 manual_curation CDS 25005621 25005937 . - 1 Parent=GSCOCT00030149001 | |
| 8943 chr1 manual_curation CDS 25006632 25006748 . - 1 Parent=GSCOCT00030149001 | |
| 8944 chr1 manual_curation CDS 25007035 25007184 . - 1 Parent=GSCOCT00030149001 | |
| 8945 chr1 manual_curation CDS 25007339 25007417 . - 0 Parent=GSCOCT00030149001 | |
| 8946 chr1 manual_curation gene 25043479 25045040 . - . ID=GSCOCG00030150001;Name=Cc01_g07220 | |
| 8947 chr1 manual_curation mRNA 25043479 25045040 . - . ID=GSCOCT00030150001;Parent=GSCOCG00030150001;Name=Cc01_g07220 | |
| 8948 chr1 manual_curation polypeptide 25043479 25045040 . - . ID=GSCOCP00030150001;Dbxref=TAIR:AT1G14500.1,TAIR:AT4G10720.1,TAIR:AT5G15500.2,TrEMBL:Q3E7H2,TrEMBL:Q4V397,TrEMBL:Q9LF32;Derives_from=GSCOCT00030150001;Name=Cc01_g07220;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030150001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(2152339..2152380%2C2151268..2151619%2C2150819..2151189));owner=coffea | |
| 8949 chr1 manual_curation exon 25043479 25043849 . - . Parent=GSCOCT00030150001 | |
| 8950 chr1 manual_curation exon 25043928 25044279 . - . Parent=GSCOCT00030150001 | |
| 8951 chr1 manual_curation exon 25044999 25045040 . - . Parent=GSCOCT00030150001 | |
| 8952 chr1 manual_curation CDS 25043479 25043849 . - 1 Parent=GSCOCT00030150001 | |
| 8953 chr1 manual_curation CDS 25043928 25044279 . - 0 Parent=GSCOCT00030150001 | |
| 8954 chr1 manual_curation CDS 25044999 25045040 . - 0 Parent=GSCOCT00030150001 | |
| 8955 chr1 manual_curation gene 25047088 25047928 . - . ID=GSCOCG00030152001;Name=Cc01_g07230 | |
| 8956 chr1 manual_curation mRNA 25047088 25047928 . - . ID=GSCOCT00030152001;Parent=GSCOCG00030152001;Name=Cc01_g07230 | |
| 8957 chr1 manual_curation polypeptide 25047088 25047720 . - . ID=GSCOCP00030152001;Dbxref=GENE3D:G3DSA:1.25.40.20,InterPro:IPR002110,InterPro:IPR020683,PROFILE:PS50297,SMART:SM00248,SUPERFAMILY:SSF48403,TAIR:AT4G10720.1,TAIR:AT5G54610.1,TAIR:AT5G54620.1,TrEMBL:G7JPR5,TrEMBL:G7L8Q1,TrEMBL:I1KDS3;Derives_from=GSCOCT00030152001;Name=Cc01_g07230;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Ankyrin repeat family protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030152001~ Putative Ankyrin repeat family protein~ unknown_gene~ fragment;original_location=complement(2154428..2155060);owner=coffea | |
| 8958 chr1 manual_curation exon 25047088 25047928 . - . Parent=GSCOCT00030152001 | |
| 8959 chr1 manual_curation CDS 25047088 25047720 . - 0 Parent=GSCOCT00030152001 | |
| 8960 chr1 manual_curation gene 25153066 25156089 . + . ID=GSCOCG00030156001;Name=Cc01_g07240 | |
| 8961 chr1 manual_curation mRNA 25153066 25156089 . + . ID=GSCOCT00030156001;Parent=GSCOCG00030156001;Name=Cc01_g07240 | |
| 8962 chr1 manual_curation polypeptide 25153365 25155590 . + . ID=GSCOCP00030156001;Dbxref=InterPro:IPR005123,PFAM:PF03171,SwissProt:Q43383,SwissProt:Q84MB3,SwissProt:Q9LTH7,TAIR:AT1G55290.1,TAIR:AT3G13610.1,TAIR:AT5G12270.1,TrEMBL:B9GLG4,TrEMBL:F6GUJ9,TrEMBL:F6GUK0;Derives_from=GSCOCT00030156001;Name=Cc01_g07240;Ontology_term=CC_evidence_code:ISS,GO:0016491,CC_EC_number:1.14.11.9,PRODUCT:Putative 1-aminocyclopropane-1-carboxylate oxidase homolog 12,CC_functional_completeness:fragment,CC_gene:At5g59540,CC_gene:At1g06620,CC_gene:2A6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030156001~ Putative 1-aminocyclopropane-1-carboxylate oxidase homolog 12~ At5g59540~ fragment;original_location=join(2260705..2260901%2C2262357..2262930);owner=coffea | |
| 8963 chr1 manual_curation exon 25153066 25153561 . + . Parent=GSCOCT00030156001 | |
| 8964 chr1 manual_curation exon 25155017 25156089 . + . Parent=GSCOCT00030156001 | |
| 8965 chr1 manual_curation CDS 25153365 25153561 . + 0 Parent=GSCOCT00030156001 | |
| 8966 chr1 manual_curation CDS 25155017 25155590 . + 2 Parent=GSCOCT00030156001 | |
| 8967 chr1 manual_curation gene 25158875 25161682 . + . ID=GSCOCG00030157001;Name=Cc01_g07250 | |
| 8968 chr1 manual_curation mRNA 25158875 25161682 . + . ID=GSCOCT00030157001;Parent=GSCOCG00030157001;Name=Cc01_g07250 | |
| 8969 chr1 manual_curation polypeptide 25158875 25161682 . + . ID=GSCOCP00030157001;Dbxref=InterPro:IPR005123,PFAM:PF03171,SwissProt:Q43383,SwissProt:Q84MB3,SwissProt:Q9LTH8,TAIR:AT1G55290.1,TAIR:AT3G13610.1,TAIR:AT5G12270.1,TrEMBL:B9GLG4,TrEMBL:F6GUJ9,TrEMBL:F6GUK0;Derives_from=GSCOCT00030157001;Name=Cc01_g07250;Ontology_term=CC_evidence_code:ISS,GO:0016491,CC_EC_number:1.14.11.9,PRODUCT:Putative 1-aminocyclopropane-1-carboxylate oxidase homolog 11,CC_functional_completeness:complete,CC_gene:At5g59530,CC_gene:At1g06620,CC_gene:2A6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030157001~ Putative 1-aminocyclopropane-1-carboxylate oxidase homolog 11~ At5g59530~ complete;original_location=join(2266215..2266714%2C2268449..2269022);owner=coffea | |
| 8970 chr1 manual_curation exon 25158875 25159374 . + . Parent=GSCOCT00030157001 | |
| 8971 chr1 manual_curation exon 25161109 25161682 . + . Parent=GSCOCT00030157001 | |
| 8972 chr1 manual_curation CDS 25158875 25159374 . + 0 Parent=GSCOCT00030157001 | |
| 8973 chr1 manual_curation CDS 25161109 25161682 . + 2 Parent=GSCOCT00030157001 | |
| 8974 chr1 manual_curation gene 25165071 25169336 . + . ID=GSCOCG00030158001;Name=Cc01_g07260 | |
| 8975 chr1 manual_curation mRNA 25165071 25169336 . + . ID=GSCOCT00030158001;Parent=GSCOCG00030158001;Name=Cc01_g07260 | |
| 8976 chr1 manual_curation polypeptide 25165570 25168807 . + . ID=GSCOCP00030158001;Dbxref=TAIR:AT1G55290.1,TAIR:AT3G13610.1,TrEMBL:B9GLG4,TrEMBL:B9GLG6,TrEMBL:F6GUK0;Derives_from=GSCOCT00030158001;Name=Cc01_g07260;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030158001~ Putative 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein~ unknown_gene~ fragment;original_location=join(2272910..2272965%2C2275949..2276147);owner=coffea | |
| 8977 chr1 manual_curation exon 25165071 25165625 . + . Parent=GSCOCT00030158001 | |
| 8978 chr1 manual_curation exon 25168609 25169336 . + . Parent=GSCOCT00030158001 | |
| 8979 chr1 manual_curation CDS 25165570 25165625 . + 0 Parent=GSCOCT00030158001 | |
| 8980 chr1 manual_curation CDS 25168609 25168807 . + 2 Parent=GSCOCT00030158001 | |
| 8981 chr1 manual_curation gene 25172953 25174806 . + . ID=GSCOCG00030159001;Name=Cc01_g07270 | |
| 8982 chr1 manual_curation mRNA 25172953 25174806 . + . ID=GSCOCT00030159001;Parent=GSCOCG00030159001;Name=Cc01_g07270 | |
| 8983 chr1 manual_curation polypeptide 25173138 25173827 . + . ID=GSCOCP00030159001;Dbxref=SwissProt:O04274,SwissProt:P10967,SwissProt:Q96323,TAIR:AT1G55290.1,TAIR:AT3G13610.1,TAIR:AT5G12270.1,TrEMBL:B9GLG4,TrEMBL:F6GUJ9,TrEMBL:F6GUK0;Derives_from=GSCOCT00030159001;Name=Cc01_g07270;Ontology_term=CC_evidence_code:ISS,CC_EC_number:1.14.11.19,PRODUCT:Putative Leucoanthocyanidin dioxygenase,CC_functional_completeness:fragment,CC_gene:LDOX,CC_gene:ANS,CC_gene:ACO3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030159001~ Putative Leucoanthocyanidin dioxygenase~ LDOX~ fragment;original_location=join(2280478..2280977%2C2281104..2281167);owner=coffea | |
| 8984 chr1 manual_curation exon 25172953 25173637 . + . Parent=GSCOCT00030159001 | |
| 8985 chr1 manual_curation exon 25173764 25174806 . + . Parent=GSCOCT00030159001 | |
| 8986 chr1 manual_curation CDS 25173138 25173637 . + 0 Parent=GSCOCT00030159001 | |
| 8987 chr1 manual_curation CDS 25173764 25173827 . + 2 Parent=GSCOCT00030159001 | |
| 8988 chr1 manual_curation gene 25174905 25176746 . - . ID=GSCOCG00030160001;Name=Cc01_g07280 | |
| 8989 chr1 manual_curation mRNA 25174905 25176746 . - . ID=GSCOCT00030160001;Parent=GSCOCG00030160001;Name=Cc01_g07280 | |
| 8990 chr1 manual_curation polypeptide 25174905 25176746 . - . ID=GSCOCP00030160001;Dbxref=InterPro:IPR015706,PANTHER:PTHR19446,SwissProt:P0C2F6,SwissProt:P93295,TAIR:AT3G09510.1,TAIR:AT4G29090.1,TAIR:ATMG00310.1,TrEMBL:B8BNV4,TrEMBL:Q9C697,TrEMBL:Q9SHP2;Derives_from=GSCOCT00030160001;Name=Cc01_g07280;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized mitochondrial protein AtMg00310,CC_functional_completeness:modules,CC_gene:AtMg00310,CC_gene:At1g65750;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030160001~ Putative Uncharacterized mitochondrial protein AtMg00310~ AtMg00310~ modules;original_location=complement(2282245..2284086);owner=coffea | |
| 8991 chr1 manual_curation exon 25174905 25176746 . - . Parent=GSCOCT00030160001 | |
| 8992 chr1 manual_curation CDS 25174905 25176746 . - 0 Parent=GSCOCT00030160001 | |
| 8993 chr1 manual_curation gene 25177751 25182025 . + . ID=GSCOCG00030161001;Name=Cc01_g07290 | |
| 8994 chr1 manual_curation mRNA 25177751 25182025 . + . ID=GSCOCT00030161001;Parent=GSCOCG00030161001;Name=Cc01_g07290 | |
| 8995 chr1 manual_curation polypeptide 25177998 25181806 . + . ID=GSCOCP00030161001;Dbxref=InterPro:IPR002283,InterPro:IPR005123,PFAM:PF03171,PRINTS:PR00682,SwissProt:Q84MB3,SwissProt:Q9LSW7,SwissProt:Q9ZWQ9,TAIR:AT1G55290.1,TAIR:AT3G13610.1,TAIR:AT5G12270.1,TrEMBL:B9GLG4,TrEMBL:F6GUJ9,TrEMBL:F6GUK0;Derives_from=GSCOCT00030161001;Name=Cc01_g07290;Ontology_term=CC_evidence_code:ISS,GO:0005506,GO:0016491,GO:0055114,CC_EC_number:1.14.11.9,PRODUCT:Putative 1-aminocyclopropane-1-carboxylate oxidase homolog 1,CC_functional_completeness:complete,CC_gene:At1g06620,CC_gene:FLS,CC_gene:At5g43440;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030161001~ Putative 1-aminocyclopropane-1-carboxylate oxidase homolog 1~ At1g06620~ complete;original_location=join(2285338..2285837%2C2288301..2288426%2C2288573..2289146);owner=coffea | |
| 8996 chr1 manual_curation exon 25177751 25178497 . + . Parent=GSCOCT00030161001 | |
| 8997 chr1 manual_curation exon 25180961 25181086 . + . Parent=GSCOCT00030161001 | |
| 8998 chr1 manual_curation exon 25181233 25182025 . + . Parent=GSCOCT00030161001 | |
| 8999 chr1 manual_curation CDS 25177998 25178497 . + 0 Parent=GSCOCT00030161001 | |
| 9000 chr1 manual_curation CDS 25180961 25181086 . + 2 Parent=GSCOCT00030161001 | |
| 9001 chr1 manual_curation CDS 25181233 25181806 . + 2 Parent=GSCOCT00030161001 | |
| 9002 chr1 manual_curation gene 25182653 25188017 . - . ID=GSCOCG00030162001;Name=Cc01_g07300 | |
| 9003 chr1 manual_curation mRNA 25182653 25188017 . - . ID=GSCOCT00030162001;Parent=GSCOCG00030162001;Name=Cc01_g07300 | |
| 9004 chr1 manual_curation polypeptide 25182909 25187926 . - . ID=GSCOCP00030162001;Dbxref=InterPro:IPR005835,InterPro:IPR011004,PFAM:PF00483,SUPERFAMILY:SSF51161,SwissProt:P70541,SwissProt:Q4R6T3,SwissProt:Q54FQ8,TAIR:AT2G34970.1,TAIR:AT4G18300.1,TAIR:AT5G19485.1,TrEMBL:B9HNK0,TrEMBL:D7SWM4,TrEMBL:I1KSB2;Derives_from=GSCOCT00030162001;Name=Cc01_g07300;Ontology_term=CC_evidence_code:ISS,GO:0009058,GO:0016740,GO:0016779,CC_EC_number:2.7.7.13,CC_EC_number:2.7.7.13,PRODUCT:Putative Translation initiation factor eIF-2B subunit gamma,CC_functional_completeness:complete,CC_gene:eif2b3,CC_gene:Eif2b3,CC_gene:EIF2B3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030162001~ Putative Translation initiation factor eIF-2B subunit gamma~ eif2b3~ complete;original_location=complement(join(2295201..2295266%2C2295000..2295095%2C2294743..2294820%2C2292959..2293039%2C2292665..2292878%2C2292523..2292581%2C2291816..2291865%2C2291608..2291695%2C2291252..2291512%2C2291008..2291100%2C2290744..2290848%2C2290415..2290531%2C2290249..2290320));owner=coffea | |
| 9005 chr1 manual_curation exon 25182653 25182980 . - . Parent=GSCOCT00030162001 | |
| 9006 chr1 manual_curation exon 25183075 25183191 . - . Parent=GSCOCT00030162001 | |
| 9007 chr1 manual_curation exon 25183404 25183508 . - . Parent=GSCOCT00030162001 | |
| 9008 chr1 manual_curation exon 25183668 25183760 . - . Parent=GSCOCT00030162001 | |
| 9009 chr1 manual_curation exon 25183912 25184172 . - . Parent=GSCOCT00030162001 | |
| 9010 chr1 manual_curation exon 25184268 25184355 . - . Parent=GSCOCT00030162001 | |
| 9011 chr1 manual_curation exon 25184476 25184525 . - . Parent=GSCOCT00030162001 | |
| 9012 chr1 manual_curation exon 25185183 25185241 . - . Parent=GSCOCT00030162001 | |
| 9013 chr1 manual_curation exon 25185325 25185538 . - . Parent=GSCOCT00030162001 | |
| 9014 chr1 manual_curation exon 25185619 25185699 . - . Parent=GSCOCT00030162001 | |
| 9015 chr1 manual_curation exon 25187403 25187480 . - . Parent=GSCOCT00030162001 | |
| 9016 chr1 manual_curation exon 25187660 25187755 . - . Parent=GSCOCT00030162001 | |
| 9017 chr1 manual_curation exon 25187861 25188017 . - . Parent=GSCOCT00030162001 | |
| 9018 chr1 manual_curation CDS 25182909 25182980 . - 0 Parent=GSCOCT00030162001 | |
| 9019 chr1 manual_curation CDS 25183075 25183191 . - 0 Parent=GSCOCT00030162001 | |
| 9020 chr1 manual_curation CDS 25183404 25183508 . - 0 Parent=GSCOCT00030162001 | |
| 9021 chr1 manual_curation CDS 25183668 25183760 . - 0 Parent=GSCOCT00030162001 | |
| 9022 chr1 manual_curation CDS 25183912 25184172 . - 0 Parent=GSCOCT00030162001 | |
| 9023 chr1 manual_curation CDS 25184268 25184355 . - 2 Parent=GSCOCT00030162001 | |
| 9024 chr1 manual_curation CDS 25184476 25184525 . - 0 Parent=GSCOCT00030162001 | |
| 9025 chr1 manual_curation CDS 25185183 25185241 . - 1 Parent=GSCOCT00030162001 | |
| 9026 chr1 manual_curation CDS 25185325 25185538 . - 0 Parent=GSCOCT00030162001 | |
| 9027 chr1 manual_curation CDS 25185619 25185699 . - 0 Parent=GSCOCT00030162001 | |
| 9028 chr1 manual_curation CDS 25187403 25187480 . - 0 Parent=GSCOCT00030162001 | |
| 9029 chr1 manual_curation CDS 25187660 25187755 . - 0 Parent=GSCOCT00030162001 | |
| 9030 chr1 manual_curation CDS 25187861 25187926 . - 0 Parent=GSCOCT00030162001 | |
| 9031 chr1 manual_curation gene 25188938 25191462 . + . ID=GSCOCG00030163001;Name=Cc01_g07310 | |
| 9032 chr1 manual_curation mRNA 25188938 25191462 . + . ID=GSCOCT00030163001;Parent=GSCOCG00030163001;Name=Cc01_g07310 | |
| 9033 chr1 manual_curation polypeptide 25189932 25191362 . + . ID=GSCOCP00030163001;Dbxref=InterPro:IPR001841,InterPro:IPR002867,InterPro:IPR017907,PFAM:PF01485,PROFILE:PS50089,PROSITE:PS00518,SMART:SM00647,SwissProt:Q84RR0,SwissProt:Q8L829,SwissProt:Q8W468,TAIR:AT1G05890.2,TAIR:AT1G65430.1,TAIR:AT2G31510.1,TrEMBL:I1LJR4,TrEMBL:I1LQF4,TrEMBL:I1M544;Derives_from=GSCOCT00030163001;Name=Cc01_g07310;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Probable E3 ubiquitin-protein ligase ARI8,CC_functional_completeness:complete,CC_gene:ARI8,CC_gene:ARI7,CC_gene:ARI5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030163001~ Probable E3 ubiquitin-protein ligase ARI8~ ARI8~ complete;original_location=2297272..2298702;owner=coffea | |
| 9034 chr1 manual_curation exon 25188938 25189198 . + . Parent=GSCOCT00030163001 | |
| 9035 chr1 manual_curation exon 25189783 25191462 . + . Parent=GSCOCT00030163001 | |
| 9036 chr1 manual_curation CDS 25189932 25191362 . + 0 Parent=GSCOCT00030163001 | |
| 9037 chr1 manual_curation gene 25195041 25196318 . - . ID=GSCOCG00030165001;Name=Cc01_g07320 | |
| 9038 chr1 manual_curation mRNA 25195041 25196318 . - . ID=GSCOCT00030165001;Parent=GSCOCG00030165001;Name=Cc01_g07320 | |
| 9039 chr1 manual_curation polypeptide 25195041 25196318 . - . ID=GSCOCP00030165001;Dbxref=GENE3D:G3DSA:2.120.10.80,InterPro:IPR001810,InterPro:IPR006652,InterPro:IPR011043,InterPro:IPR015915,PFAM:PF00646,PFAM:PF01344,PROFILE:PS50181,SMART:SM00256,SMART:SM00612,SUPERFAMILY:SSF50965,SwissProt:Q6NPN5,SwissProt:Q9CAG8,SwissProt:Q9FKJ0,TAIR:AT1G67480.1,TAIR:AT5G26960.1,TAIR:AT5G60570.1,TrEMBL:B9HNJ9,TrEMBL:B9SB63,TrEMBL:D7M5E9;Derives_from=GSCOCT00030165001;Name=Cc01_g07320;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:F-box/kelch-repeat protein At5g26960,CC_functional_completeness:complete,CC_gene:At5g26960,CC_gene:At1g67480,CC_gene:At5g60570;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030165001~ F-box/kelch-repeat protein At5g26960~ At5g26960~ complete;original_location=complement(2302381..2303658);owner=coffea | |
| 9040 chr1 manual_curation exon 25195041 25196318 . - . Parent=GSCOCT00030165001 | |
| 9041 chr1 manual_curation CDS 25195041 25196318 . - 0 Parent=GSCOCT00030165001 | |
| 9042 chr1 manual_curation gene 25209483 25212997 . + . ID=GSCOCG00030167001;Name=Cc01_g07330 | |
| 9043 chr1 manual_curation mRNA 25209483 25212997 . + . ID=GSCOCT00030167001;Parent=GSCOCG00030167001;Name=Cc01_g07330 | |
| 9044 chr1 manual_curation polypeptide 25209880 25212727 . + . ID=GSCOCP00030167001;Dbxref=GENE3D:G3DSA:1.10.472.10,InterPro:IPR004367,InterPro:IPR006670,InterPro:IPR006671,InterPro:IPR011028,InterPro:IPR013763,InterPro:IPR014400,PFAM:PF00134,PFAM:PF02984,PIR:PIRSF001771,PROSITE:PS00292,SMART:SM00385,SUPERFAMILY:SSF47954,SwissProt:P25011,SwissProt:P34800,SwissProt:P34801,TAIR:AT2G26760.1,TAIR:AT3G11520.1,TAIR:AT5G06150.1,TrEMBL:Q2PHL0,TrEMBL:Q9LD02,TrEMBL:Q9SBQ4;Derives_from=GSCOCT00030167001;Name=Cc01_g07330;Ontology_term=CC_evidence_code:ISS,GO:0005634,CC_EC_number:missing_EC_number,PRODUCT:G2/mitotic-specific cyclin-1,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030167001~ G2/mitotic-specific cyclin-1~ unknown_gene~ complete;original_location=join(2317220..2317259%2C2318150..2318279%2C2318391..2318448%2C2318541..2318741%2C2318832..2318957%2C2319043..2319291%2C2319395..2319556%2C2319640..2319821%2C2319920..2320067);owner=coffea | |
| 9045 chr1 manual_curation exon 25209483 25209919 . + . Parent=GSCOCT00030167001 | |
| 9046 chr1 manual_curation exon 25210810 25210939 . + . Parent=GSCOCT00030167001 | |
| 9047 chr1 manual_curation exon 25211051 25211108 . + . Parent=GSCOCT00030167001 | |
| 9048 chr1 manual_curation exon 25211201 25211401 . + . Parent=GSCOCT00030167001 | |
| 9049 chr1 manual_curation exon 25211492 25211617 . + . Parent=GSCOCT00030167001 | |
| 9050 chr1 manual_curation exon 25211703 25211951 . + . Parent=GSCOCT00030167001 | |
| 9051 chr1 manual_curation exon 25212055 25212216 . + . Parent=GSCOCT00030167001 | |
| 9052 chr1 manual_curation exon 25212300 25212481 . + . Parent=GSCOCT00030167001 | |
| 9053 chr1 manual_curation exon 25212580 25212997 . + . Parent=GSCOCT00030167001 | |
| 9054 chr1 manual_curation CDS 25209880 25209919 . + 0 Parent=GSCOCT00030167001 | |
| 9055 chr1 manual_curation CDS 25210810 25210939 . + 1 Parent=GSCOCT00030167001 | |
| 9056 chr1 manual_curation CDS 25211051 25211108 . + 2 Parent=GSCOCT00030167001 | |
| 9057 chr1 manual_curation CDS 25211201 25211401 . + 0 Parent=GSCOCT00030167001 | |
| 9058 chr1 manual_curation CDS 25211492 25211617 . + 0 Parent=GSCOCT00030167001 | |
| 9059 chr1 manual_curation CDS 25211703 25211951 . + 0 Parent=GSCOCT00030167001 | |
| 9060 chr1 manual_curation CDS 25212055 25212216 . + 0 Parent=GSCOCT00030167001 | |
| 9061 chr1 manual_curation CDS 25212300 25212481 . + 0 Parent=GSCOCT00030167001 | |
| 9062 chr1 manual_curation CDS 25212580 25212727 . + 2 Parent=GSCOCT00030167001 | |
| 9063 chr1 manual_curation gene 25215111 25216541 . + . ID=GSCOCG00030168001;Name=Cc01_g07340 | |
| 9064 chr1 manual_curation mRNA 25215111 25216541 . + . ID=GSCOCT00030168001;Parent=GSCOCG00030168001;Name=Cc01_g07340 | |
| 9065 chr1 manual_curation polypeptide 25215111 25216541 . + . ID=GSCOCP00030168001;Dbxref=InterPro:IPR000795,InterPro:IPR005225,InterPro:IPR015760,PANTHER:PTHR23115:SF41,PFAM:PF00009,SwissProt:O60841,SwissProt:P39730,SwissProt:Q10251,TAIR:AT1G76720.1,TAIR:AT1G76810.1,TAIR:AT1G76820.1,TIGRFAMs:TIGR00231,TrEMBL:A5ANA2,TrEMBL:B9I4W6,TrEMBL:G7ID01;Derives_from=GSCOCT00030168001;Name=Cc01_g07340;Ontology_term=CC_evidence_code:ISS,GO:0003924,GO:0005525,CC_EC_number:missing_EC_number,PRODUCT:Putative eukaryotic translation initiation factor 2 (eIF-2) family protein,CC_functional_completeness:fragment,CC_gene:SPAC56F8.03,CC_gene:FUN12,CC_gene:EIF5B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030168001~ Putative eukaryotic translation initiation factor 2 (eIF-2) family protein~ SPAC56F8.03~ fragment;original_location=join(2322451..2323389%2C2323438..2323643%2C2323731..2323881);owner=coffea | |
| 9066 chr1 manual_curation exon 25215111 25216049 . + . Parent=GSCOCT00030168001 | |
| 9067 chr1 manual_curation exon 25216098 25216303 . + . Parent=GSCOCT00030168001 | |
| 9068 chr1 manual_curation exon 25216391 25216541 . + . Parent=GSCOCT00030168001 | |
| 9069 chr1 manual_curation CDS 25215111 25216049 . + 0 Parent=GSCOCT00030168001 | |
| 9070 chr1 manual_curation CDS 25216098 25216303 . + 0 Parent=GSCOCT00030168001 | |
| 9071 chr1 manual_curation CDS 25216391 25216541 . + 2 Parent=GSCOCT00030168001 | |
| 9072 chr1 manual_curation gene 25216749 25218384 . + . ID=GSCOCG00030169001;Name=Cc01_g07350 | |
| 9073 chr1 manual_curation mRNA 25216749 25218384 . + . ID=GSCOCT00030169001;Parent=GSCOCG00030169001;Name=Cc01_g07350 | |
| 9074 chr1 manual_curation polypeptide 25216749 25217693 . + . ID=GSCOCP00030169001;Dbxref=InterPro:IPR009000,SUPERFAMILY:SSF50447,SwissProt:B2GUV7,SwissProt:O60841,SwissProt:Q05D44,TAIR:AT1G76720.1,TAIR:AT1G76810.1,TAIR:AT1G76820.1,TrEMBL:F6GYV0,TrEMBL:I1LDH2,TrEMBL:I1NH15;Derives_from=GSCOCT00030169001;Name=Cc01_g07350;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Eukaryotic translation initiation factor 5B,CC_functional_completeness:fragment,CC_gene:Eif5b,CC_gene:EIF5B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030169001~ Putative Eukaryotic translation initiation factor 5B~ Eif5b~ fragment;original_location=2324089..2325033;owner=coffea | |
| 9075 chr1 manual_curation exon 25216749 25218384 . + . Parent=GSCOCT00030169001 | |
| 9076 chr1 manual_curation CDS 25216749 25217693 . + 0 Parent=GSCOCT00030169001 | |
| 9077 chr1 manual_curation gene 25218456 25221513 . - . ID=GSCOCG00030170001;Name=Cc01_g07360 | |
| 9078 chr1 manual_curation mRNA 25218456 25221513 . - . ID=GSCOCT00030170001;Parent=GSCOCG00030170001;Name=Cc01_g07360 | |
| 9079 chr1 manual_curation polypeptide 25218456 25219100 . - . ID=GSCOCP00030170001;Dbxref=GENE3D:G3DSA:3.90.1170.40,InterPro:IPR003448,PANTHER:PTHR23404:SF2,PFAM:PF02391,SUPERFAMILY:SSF54690,SwissProt:A2X0R4,SwissProt:O22827,SwissProt:Q6Z2X3,TAIR:AT2G43760.1,TrEMBL:C6TCP2,TrEMBL:I1KML2,TrEMBL:I1NDY4;Derives_from=GSCOCT00030170001;Name=Cc01_g07360;Ontology_term=CC_evidence_code:ISS,GO:0006777,CC_EC_number:missing_EC_number,PRODUCT:Molybdopterin synthase catalytic subunit,CC_functional_completeness:complete,CC_gene:MOCS2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030170001~ Molybdopterin synthase catalytic subunit~ MOCS2~ complete;original_location=complement(2325796..2326440);owner=coffea | |
| 9080 chr1 manual_curation exon 25221433 25221513 . - . Parent=GSCOCT00030170001 | |
| 9081 chr1 manual_curation exon 25218456 25219160 . - . Parent=GSCOCT00030170001 | |
| 9082 chr1 manual_curation CDS 25218456 25219100 . - 0 Parent=GSCOCT00030170001 | |
| 9083 chr1 manual_curation gene 25225309 25229552 . + . ID=GSCOCG00030171001;Name=Cc01_g07370 | |
| 9084 chr1 manual_curation mRNA 25225309 25229552 . + . ID=GSCOCT00030171001;Parent=GSCOCG00030171001;Name=Cc01_g07370 | |
| 9085 chr1 manual_curation polypeptide 25225664 25229552 . + . ID=GSCOCP00030171001;Dbxref=InterPro:IPR000719,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,SUPERFAMILY:SSF56112,SwissProt:Q5JK68,SwissProt:Q6I5Y0,SwissProt:Q9LFT8,TAIR:AT1G67580.1,TAIR:AT5G10270.1,TAIR:AT5G64960.1,TrEMBL:I1M791;Derives_from=GSCOCT00030171001;Name=Cc01_g07370;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0005524,GO:0006468,CC_EC_number:2.7.11.22,PRODUCT:Cyclin-dependent kinase C-1,CC_functional_completeness:fragment,CC_gene:CDKC-1,CC_gene:CDKC-2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030171001~ Cyclin-dependent kinase C-1~ CDKC-1~ fragment;original_location=join(2333004..2333113%2C2335840..2335921%2C2336569..2336659%2C2336855..2336892);owner=coffea | |
| 9086 chr1 manual_curation exon 25225309 25225535 . + . Parent=GSCOCT00030171001 | |
| 9087 chr1 manual_curation exon 25225625 25225773 . + . Parent=GSCOCT00030171001 | |
| 9088 chr1 manual_curation exon 25228500 25228581 . + . Parent=GSCOCT00030171001 | |
| 9089 chr1 manual_curation exon 25229229 25229319 . + . Parent=GSCOCT00030171001 | |
| 9090 chr1 manual_curation exon 25229515 25229552 . + . Parent=GSCOCT00030171001 | |
| 9091 chr1 manual_curation CDS 25225664 25225773 . + 0 Parent=GSCOCT00030171001 | |
| 9092 chr1 manual_curation CDS 25228500 25228581 . + 2 Parent=GSCOCT00030171001 | |
| 9093 chr1 manual_curation CDS 25229229 25229319 . + 0 Parent=GSCOCT00030171001 | |
| 9094 chr1 manual_curation CDS 25229515 25229552 . + 1 Parent=GSCOCT00030171001 | |
| 9095 chr1 manual_curation gene 25229656 25233084 . + . ID=GSCOCG00030172001;Name=Cc01_g07380 | |
| 9096 chr1 manual_curation mRNA 25229656 25233084 . + . ID=GSCOCT00030172001;Parent=GSCOCG00030172001;Name=Cc01_g07380 | |
| 9097 chr1 manual_curation polypeptide 25229656 25232743 . + . ID=GSCOCP00030172001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017442,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00108,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q5JK68,SwissProt:Q8W4P1,SwissProt:Q9LFT8,TAIR:AT1G53050.1,TAIR:AT5G10270.1,TAIR:AT5G64960.1,TrEMBL:B9HDG3,TrEMBL:B9RVM0,TrEMBL:F6H9Y5;Derives_from=GSCOCT00030172001;Name=Cc01_g07380;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.23,PRODUCT:Cyclin-dependent kinase C-1,CC_functional_completeness:fragment,CC_gene:CDKC-1,CC_gene:CDKC-2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030172001~ Cyclin-dependent kinase C-1~ CDKC-1~ fragment;original_location=join(2336996..2337017%2C2337192..2337301%2C2337392..2337464%2C2337549..2337669%2C2337788..2337905%2C2338759..2338898%2C2338990..2339047%2C2339368..2339438%2C2339540..2340083);owner=coffea | |
| 9098 chr1 manual_curation exon 25229656 25229677 . + . Parent=GSCOCT00030172001 | |
| 9099 chr1 manual_curation exon 25229852 25229961 . + . Parent=GSCOCT00030172001 | |
| 9100 chr1 manual_curation exon 25230052 25230124 . + . Parent=GSCOCT00030172001 | |
| 9101 chr1 manual_curation exon 25230209 25230329 . + . Parent=GSCOCT00030172001 | |
| 9102 chr1 manual_curation exon 25230448 25230565 . + . Parent=GSCOCT00030172001 | |
| 9103 chr1 manual_curation exon 25231419 25231558 . + . Parent=GSCOCT00030172001 | |
| 9104 chr1 manual_curation exon 25231650 25231707 . + . Parent=GSCOCT00030172001 | |
| 9105 chr1 manual_curation exon 25232028 25232098 . + . Parent=GSCOCT00030172001 | |
| 9106 chr1 manual_curation exon 25232200 25233084 . + . Parent=GSCOCT00030172001 | |
| 9107 chr1 manual_curation CDS 25229656 25229677 . + 0 Parent=GSCOCT00030172001 | |
| 9108 chr1 manual_curation CDS 25229852 25229961 . + 1 Parent=GSCOCT00030172001 | |
| 9109 chr1 manual_curation CDS 25230052 25230124 . + 0 Parent=GSCOCT00030172001 | |
| 9110 chr1 manual_curation CDS 25230209 25230329 . + 1 Parent=GSCOCT00030172001 | |
| 9111 chr1 manual_curation CDS 25230448 25230565 . + 2 Parent=GSCOCT00030172001 | |
| 9112 chr1 manual_curation CDS 25231419 25231558 . + 0 Parent=GSCOCT00030172001 | |
| 9113 chr1 manual_curation CDS 25231650 25231707 . + 2 Parent=GSCOCT00030172001 | |
| 9114 chr1 manual_curation CDS 25232028 25232098 . + 0 Parent=GSCOCT00030172001 | |
| 9115 chr1 manual_curation CDS 25232200 25232743 . + 2 Parent=GSCOCT00030172001 | |
| 9116 chr1 manual_curation gene 25246303 25249474 . - . ID=GSCOCG00030175001;Name=Cc01_g07390 | |
| 9117 chr1 manual_curation mRNA 25246303 25249474 . - . ID=GSCOCT00030175001;Parent=GSCOCG00030175001;Name=Cc01_g07390 | |
| 9118 chr1 manual_curation polypeptide 25246303 25249317 . - . ID=GSCOCP00030175001;Dbxref=InterPro:IPR002085,InterPro:IPR002328,InterPro:IPR011032,InterPro:IPR013149,InterPro:IPR013154,PANTHER:PTHR11695,PFAM:PF00107,PFAM:PF08240,PROSITE:PS00059,SUPERFAMILY:SSF50129,SwissProt:Q0V7W6,SwissProt:Q9FH04,SwissProt:Q9SK87,TAIR:AT1G22440.1,TAIR:AT4G22110.1,TAIR:AT5G42250.1,TrEMBL:B9R8J1,TrEMBL:F6H0C5,TrEMBL:Q41241;Derives_from=GSCOCT00030175001;Name=Cc01_g07390;Ontology_term=CC_evidence_code:ISS,GO:0008270,GO:0016491,GO:0055114,CC_EC_number:1.1.1.284,PRODUCT:Alcohol dehydrogenase-like 7,CC_functional_completeness:complete,CC_gene:At5g42250,CC_gene:At1g22440,CC_gene:At4g22110;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030175001~ Alcohol dehydrogenase-like 7~ At5g42250~ complete;original_location=complement(join(2356603..2356657%2C2355673..2355809%2C2355539..2355585%2C2355130..2355452%2C2354864..2354946%2C2354684..2354759%2C2354512..2354576%2C2354233..2354331%2C2353945..2354109%2C2353643..2353798));owner=coffea | |
| 9119 chr1 manual_curation exon 25246303 25246458 . - . Parent=GSCOCT00030175001 | |
| 9120 chr1 manual_curation exon 25246605 25246769 . - . Parent=GSCOCT00030175001 | |
| 9121 chr1 manual_curation exon 25246893 25246991 . - . Parent=GSCOCT00030175001 | |
| 9122 chr1 manual_curation exon 25247172 25247236 . - . Parent=GSCOCT00030175001 | |
| 9123 chr1 manual_curation exon 25247344 25247419 . - . Parent=GSCOCT00030175001 | |
| 9124 chr1 manual_curation exon 25247524 25247606 . - . Parent=GSCOCT00030175001 | |
| 9125 chr1 manual_curation exon 25247790 25248112 . - . Parent=GSCOCT00030175001 | |
| 9126 chr1 manual_curation exon 25248199 25248245 . - . Parent=GSCOCT00030175001 | |
| 9127 chr1 manual_curation exon 25248333 25248469 . - . Parent=GSCOCT00030175001 | |
| 9128 chr1 manual_curation exon 25249263 25249474 . - . Parent=GSCOCT00030175001 | |
| 9129 chr1 manual_curation CDS 25246303 25246458 . - 0 Parent=GSCOCT00030175001 | |
| 9130 chr1 manual_curation CDS 25246605 25246769 . - 0 Parent=GSCOCT00030175001 | |
| 9131 chr1 manual_curation CDS 25246893 25246991 . - 0 Parent=GSCOCT00030175001 | |
| 9132 chr1 manual_curation CDS 25247172 25247236 . - 1 Parent=GSCOCT00030175001 | |
| 9133 chr1 manual_curation CDS 25247344 25247419 . - 0 Parent=GSCOCT00030175001 | |
| 9134 chr1 manual_curation CDS 25247524 25247606 . - 1 Parent=GSCOCT00030175001 | |
| 9135 chr1 manual_curation CDS 25247790 25248112 . - 2 Parent=GSCOCT00030175001 | |
| 9136 chr1 manual_curation CDS 25248199 25248245 . - 0 Parent=GSCOCT00030175001 | |
| 9137 chr1 manual_curation CDS 25248333 25248469 . - 1 Parent=GSCOCT00030175001 | |
| 9138 chr1 manual_curation CDS 25249263 25249317 . - 0 Parent=GSCOCT00030175001 | |
| 9139 chr1 manual_curation gene 25266063 25269471 . - . ID=GSCOCG00030176001;Name=Cc01_g07400 | |
| 9140 chr1 manual_curation mRNA 25266063 25269471 . - . ID=GSCOCT00030176001;Parent=GSCOCG00030176001;Name=Cc01_g07400 | |
| 9141 chr1 manual_curation polypeptide 25266063 25269397 . - . ID=GSCOCP00030176001;Dbxref=InterPro:IPR002085,InterPro:IPR002328,InterPro:IPR011032,InterPro:IPR013149,InterPro:IPR013154,PANTHER:PTHR11695,PFAM:PF00107,PFAM:PF08240,PROSITE:PS00059,SUPERFAMILY:SSF50129,SwissProt:Q0V7W6,SwissProt:Q9FH04,SwissProt:Q9SK87,TAIR:AT1G22440.1,TAIR:AT4G22110.1,TAIR:AT5G42250.1,TrEMBL:B9R8J1,TrEMBL:F6H0C5,TrEMBL:Q41241;Derives_from=GSCOCT00030176001;Name=Cc01_g07400;Ontology_term=CC_evidence_code:ISS,GO:0008270,GO:0016491,GO:0055114,CC_EC_number:1.1.1.284,PRODUCT:Alcohol dehydrogenase-like 7,CC_functional_completeness:complete,CC_gene:At5g42250,CC_gene:At1g22440,CC_gene:At4g22110;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030176001~ Alcohol dehydrogenase-like 7~ At5g42250~ complete;original_location=complement(join(2376683..2376737%2C2375722..2375858%2C2375582..2375628%2C2375090..2375495%2C2374928..2374993%2C2374747..2374822%2C2374241..2374300%2C2374140..2374174%2C2373968..2374066%2C2373700..2373864%2C2373403..2373558));owner=coffea | |
| 9142 chr1 manual_curation exon 25266063 25266218 . - . Parent=GSCOCT00030176001 | |
| 9143 chr1 manual_curation exon 25266360 25266524 . - . Parent=GSCOCT00030176001 | |
| 9144 chr1 manual_curation exon 25266628 25266726 . - . Parent=GSCOCT00030176001 | |
| 9145 chr1 manual_curation exon 25266800 25266834 . - . Parent=GSCOCT00030176001 | |
| 9146 chr1 manual_curation exon 25266901 25266960 . - . Parent=GSCOCT00030176001 | |
| 9147 chr1 manual_curation exon 25267407 25267482 . - . Parent=GSCOCT00030176001 | |
| 9148 chr1 manual_curation exon 25267588 25267653 . - . Parent=GSCOCT00030176001 | |
| 9149 chr1 manual_curation exon 25267750 25268155 . - . Parent=GSCOCT00030176001 | |
| 9150 chr1 manual_curation exon 25268242 25268288 . - . Parent=GSCOCT00030176001 | |
| 9151 chr1 manual_curation exon 25268382 25268518 . - . Parent=GSCOCT00030176001 | |
| 9152 chr1 manual_curation exon 25269343 25269471 . - . Parent=GSCOCT00030176001 | |
| 9153 chr1 manual_curation CDS 25266063 25266218 . - 0 Parent=GSCOCT00030176001 | |
| 9154 chr1 manual_curation CDS 25266360 25266524 . - 0 Parent=GSCOCT00030176001 | |
| 9155 chr1 manual_curation CDS 25266628 25266726 . - 0 Parent=GSCOCT00030176001 | |
| 9156 chr1 manual_curation CDS 25266800 25266834 . - 1 Parent=GSCOCT00030176001 | |
| 9157 chr1 manual_curation CDS 25266901 25266960 . - 1 Parent=GSCOCT00030176001 | |
| 9158 chr1 manual_curation CDS 25267407 25267482 . - 0 Parent=GSCOCT00030176001 | |
| 9159 chr1 manual_curation CDS 25267588 25267653 . - 0 Parent=GSCOCT00030176001 | |
| 9160 chr1 manual_curation CDS 25267750 25268155 . - 2 Parent=GSCOCT00030176001 | |
| 9161 chr1 manual_curation CDS 25268242 25268288 . - 0 Parent=GSCOCT00030176001 | |
| 9162 chr1 manual_curation CDS 25268382 25268518 . - 1 Parent=GSCOCT00030176001 | |
| 9163 chr1 manual_curation CDS 25269343 25269397 . - 0 Parent=GSCOCT00030176001 | |
| 9164 chr1 manual_curation gene 25276594 25279538 . - . ID=GSCOCG00030177001;Name=Cc01_g07410 | |
| 9165 chr1 manual_curation mRNA 25276594 25279538 . - . ID=GSCOCT00030177001;Parent=GSCOCG00030177001;Name=Cc01_g07410 | |
| 9166 chr1 manual_curation polypeptide 25276893 25279491 . - . ID=GSCOCP00030177001;Dbxref=InterPro:IPR002085,InterPro:IPR002328,InterPro:IPR011032,InterPro:IPR013149,InterPro:IPR013154,PANTHER:PTHR11695,PFAM:PF00107,PFAM:PF08240,PROSITE:PS00059,SUPERFAMILY:SSF50129,SwissProt:Q9FH04,SwissProt:Q9SK86,SwissProt:Q9SK87,TAIR:AT1G22430.1,TAIR:AT1G22440.1,TAIR:AT5G42250.1,TrEMBL:B9R8J1,TrEMBL:F6H0C5,TrEMBL:Q41241;Derives_from=GSCOCT00030177001;Name=Cc01_g07410;Ontology_term=CC_evidence_code:ISS,GO:0008270,GO:0016491,GO:0055114,CC_EC_number:1.1.1.284,PRODUCT:Alcohol dehydrogenase-like 7,CC_functional_completeness:complete,CC_gene:At5g42250,CC_gene:At1g22440,CC_gene:At1g22430;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030177001~ Alcohol dehydrogenase-like 7~ At5g42250~ complete;original_location=complement(join(2386777..2386831%2C2386175..2386311%2C2386025..2386071%2C2385605..2385927%2C2385349..2385431%2C2385166..2385241%2C2384984..2385048%2C2384773..2384871%2C2384505..2384669%2C2384233..2384388));owner=coffea | |
| 9167 chr1 manual_curation exon 25276594 25277048 . - . Parent=GSCOCT00030177001 | |
| 9168 chr1 manual_curation exon 25277165 25277329 . - . Parent=GSCOCT00030177001 | |
| 9169 chr1 manual_curation exon 25277433 25277531 . - . Parent=GSCOCT00030177001 | |
| 9170 chr1 manual_curation exon 25277644 25277708 . - . Parent=GSCOCT00030177001 | |
| 9171 chr1 manual_curation exon 25277826 25277901 . - . Parent=GSCOCT00030177001 | |
| 9172 chr1 manual_curation exon 25278009 25278091 . - . Parent=GSCOCT00030177001 | |
| 9173 chr1 manual_curation exon 25278265 25278587 . - . Parent=GSCOCT00030177001 | |
| 9174 chr1 manual_curation exon 25278685 25278731 . - . Parent=GSCOCT00030177001 | |
| 9175 chr1 manual_curation exon 25278835 25278971 . - . Parent=GSCOCT00030177001 | |
| 9176 chr1 manual_curation exon 25279437 25279538 . - . Parent=GSCOCT00030177001 | |
| 9177 chr1 manual_curation CDS 25276893 25277048 . - 0 Parent=GSCOCT00030177001 | |
| 9178 chr1 manual_curation CDS 25277165 25277329 . - 0 Parent=GSCOCT00030177001 | |
| 9179 chr1 manual_curation CDS 25277433 25277531 . - 0 Parent=GSCOCT00030177001 | |
| 9180 chr1 manual_curation CDS 25277644 25277708 . - 1 Parent=GSCOCT00030177001 | |
| 9181 chr1 manual_curation CDS 25277826 25277901 . - 0 Parent=GSCOCT00030177001 | |
| 9182 chr1 manual_curation CDS 25278009 25278091 . - 1 Parent=GSCOCT00030177001 | |
| 9183 chr1 manual_curation CDS 25278265 25278587 . - 2 Parent=GSCOCT00030177001 | |
| 9184 chr1 manual_curation CDS 25278685 25278731 . - 0 Parent=GSCOCT00030177001 | |
| 9185 chr1 manual_curation CDS 25278835 25278971 . - 1 Parent=GSCOCT00030177001 | |
| 9186 chr1 manual_curation CDS 25279437 25279491 . - 0 Parent=GSCOCT00030177001 | |
| 9187 chr1 manual_curation gene 25304141 25307660 . + . ID=GSCOCG00030179001;Name=Cc01_g07420 | |
| 9188 chr1 manual_curation mRNA 25304141 25307660 . + . ID=GSCOCT00030179001;Parent=GSCOCG00030179001;Name=Cc01_g07420 | |
| 9189 chr1 manual_curation polypeptide 25304324 25307304 . + . ID=GSCOCP00030179001;Dbxref=InterPro:IPR002085,InterPro:IPR002328,InterPro:IPR011032,InterPro:IPR013149,InterPro:IPR013154,PANTHER:PTHR11695,PFAM:PF00107,PFAM:PF08240,PROSITE:PS00059,SUPERFAMILY:SSF50129,SwissProt:Q0V7W6,SwissProt:Q9FH04,SwissProt:Q9SK87,TAIR:AT1G22440.1,TAIR:AT4G22110.1,TAIR:AT5G42250.1,TrEMBL:B9R8J1,TrEMBL:F6H0C5,TrEMBL:Q41241;Derives_from=GSCOCT00030179001;Name=Cc01_g07420;Ontology_term=CC_evidence_code:ISS,GO:0008270,GO:0016491,GO:0055114,CC_EC_number:1.1.1.284,PRODUCT:Alcohol dehydrogenase-like 7,CC_functional_completeness:complete,CC_gene:At5g42250,CC_gene:At1g22440,CC_gene:At4g22110;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030179001~ Alcohol dehydrogenase-like 7~ At5g42250~ complete;original_location=join(2411664..2411718%2C2412471..2412607%2C2412711..2412757%2C2412855..2413177%2C2413358..2413440%2C2413545..2413620%2C2413728..2413792%2C2413979..2414077%2C2414207..2414371%2C2414489..2414644);owner=coffea | |
| 9190 chr1 manual_curation exon 25304141 25304378 . + . Parent=GSCOCT00030179001 | |
| 9191 chr1 manual_curation exon 25305131 25305267 . + . Parent=GSCOCT00030179001 | |
| 9192 chr1 manual_curation exon 25305371 25305417 . + . Parent=GSCOCT00030179001 | |
| 9193 chr1 manual_curation exon 25305515 25305837 . + . Parent=GSCOCT00030179001 | |
| 9194 chr1 manual_curation exon 25306018 25306100 . + . Parent=GSCOCT00030179001 | |
| 9195 chr1 manual_curation exon 25306205 25306280 . + . Parent=GSCOCT00030179001 | |
| 9196 chr1 manual_curation exon 25306388 25306452 . + . Parent=GSCOCT00030179001 | |
| 9197 chr1 manual_curation exon 25306639 25306737 . + . Parent=GSCOCT00030179001 | |
| 9198 chr1 manual_curation exon 25306867 25307031 . + . Parent=GSCOCT00030179001 | |
| 9199 chr1 manual_curation exon 25307149 25307660 . + . Parent=GSCOCT00030179001 | |
| 9200 chr1 manual_curation CDS 25304324 25304378 . + 0 Parent=GSCOCT00030179001 | |
| 9201 chr1 manual_curation CDS 25305131 25305267 . + 1 Parent=GSCOCT00030179001 | |
| 9202 chr1 manual_curation CDS 25305371 25305417 . + 0 Parent=GSCOCT00030179001 | |
| 9203 chr1 manual_curation CDS 25305515 25305837 . + 2 Parent=GSCOCT00030179001 | |
| 9204 chr1 manual_curation CDS 25306018 25306100 . + 1 Parent=GSCOCT00030179001 | |
| 9205 chr1 manual_curation CDS 25306205 25306280 . + 0 Parent=GSCOCT00030179001 | |
| 9206 chr1 manual_curation CDS 25306388 25306452 . + 1 Parent=GSCOCT00030179001 | |
| 9207 chr1 manual_curation CDS 25306639 25306737 . + 0 Parent=GSCOCT00030179001 | |
| 9208 chr1 manual_curation CDS 25306867 25307031 . + 0 Parent=GSCOCT00030179001 | |
| 9209 chr1 manual_curation CDS 25307149 25307304 . + 0 Parent=GSCOCT00030179001 | |
| 9210 chr1 manual_curation gene 25312427 25318604 . + . ID=GSCOCG00030180001;Name=Cc01_g07430 | |
| 9211 chr1 manual_curation mRNA 25312427 25318604 . + . ID=GSCOCT00030180001;Parent=GSCOCG00030180001;Name=Cc01_g07430 | |
| 9212 chr1 manual_curation polypeptide 25312786 25318097 . + . ID=GSCOCP00030180001;Dbxref=GENE3D:G3DSA:2.60.210.10,GENE3D:G3DSA:3.30.710.10,InterPro:IPR000210,InterPro:IPR002083,InterPro:IPR008974,InterPro:IPR011333,InterPro:IPR013069,InterPro:IPR013089,InterPro:IPR013322,PANTHER:PTHR23230,PFAM:PF00651,PFAM:PF00917,PROFILE:PS50097,PROFILE:PS50144,SMART:SM00061,SMART:SM00225,SUPERFAMILY:SSF49599,SUPERFAMILY:SSF54695,SwissProt:A1L4W5,SwissProt:Q1EBV6,SwissProt:Q9SRV1,TAIR:AT3G03740.1,TAIR:AT3G43700.1,TAIR:AT5G21010.1,TrEMBL:B9VXZ7,TrEMBL:F6HA75,TrEMBL:F6HMP6;Derives_from=GSCOCT00030180001;Name=Cc01_g07430;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:BTB/POZ and MATH domain-containing protein 4,CC_functional_completeness:fragment,CC_gene:BPM4,CC_gene:BPM5,CC_gene:BPM6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030180001~ BTB/POZ and MATH domain-containing protein 4~ BPM4~ fragment;original_location=join(2420126..2420397%2C2422565..2422910%2C2423117..2423387%2C2425250..2425437);owner=coffea | |
| 9213 chr1 manual_curation exon 25312427 25313057 . + . Parent=GSCOCT00030180001 | |
| 9214 chr1 manual_curation exon 25315225 25315570 . + . Parent=GSCOCT00030180001 | |
| 9215 chr1 manual_curation exon 25315777 25316047 . + . Parent=GSCOCT00030180001 | |
| 9216 chr1 manual_curation exon 25317910 25318604 . + . Parent=GSCOCT00030180001 | |
| 9217 chr1 manual_curation CDS 25312786 25313057 . + 0 Parent=GSCOCT00030180001 | |
| 9218 chr1 manual_curation CDS 25315225 25315570 . + 2 Parent=GSCOCT00030180001 | |
| 9219 chr1 manual_curation CDS 25315777 25316047 . + 0 Parent=GSCOCT00030180001 | |
| 9220 chr1 manual_curation CDS 25317910 25318097 . + 1 Parent=GSCOCT00030180001 | |
| 9221 chr1 manual_curation gene 25321787 25326026 . - . ID=GSCOCG00030182001;Name=Cc01_g07440 | |
| 9222 chr1 manual_curation mRNA 25321787 25326026 . - . ID=GSCOCT00030182001;Parent=GSCOCG00030182001;Name=Cc01_g07440 | |
| 9223 chr1 manual_curation polypeptide 25321787 25324262 . - . ID=GSCOCP00030182001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001005,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR014778,InterPro:IPR015495,InterPro:IPR017930,PANTHER:PTHR10641,PFAM:PF00249,PROFILE:PS51294,SMART:SM00717,SUPERFAMILY:SSF46689,SwissProt:A2WW87,SwissProt:P80073,SwissProt:Q0JIC2,TAIR:AT2G26960.1,TAIR:AT3G11440.1,TAIR:AT5G06100.2,TrEMBL:A1Z368,TrEMBL:A1Z369,TrEMBL:F6HAD1;Derives_from=GSCOCT00030182001;Name=Cc01_g07440;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative myb domain protein 65,CC_functional_completeness:complete,CC_gene:GAM1,CC_gene:PP2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030182001~ Putative myb domain protein 65~ GAM1~ complete;original_location=complement(join(2431243..2431602%2C2429422..2430436%2C2429127..2429320));owner=coffea | |
| 9224 chr1 manual_curation exon 25325677 25326026 . - . Parent=GSCOCT00030182001 | |
| 9225 chr1 manual_curation exon 25321787 25321980 . - . Parent=GSCOCT00030182001 | |
| 9226 chr1 manual_curation exon 25322082 25323096 . - . Parent=GSCOCT00030182001 | |
| 9227 chr1 manual_curation exon 25323903 25324265 . - . Parent=GSCOCT00030182001 | |
| 9228 chr1 manual_curation CDS 25321787 25321980 . - 1 Parent=GSCOCT00030182001 | |
| 9229 chr1 manual_curation CDS 25322082 25323096 . - 0 Parent=GSCOCT00030182001 | |
| 9230 chr1 manual_curation CDS 25323903 25324262 . - 0 Parent=GSCOCT00030182001 | |
| 9231 chr1 manual_curation gene 25330994 25334633 . + . ID=GSCOCG00030183001;Name=Cc01_g07450 | |
| 9232 chr1 manual_curation mRNA 25330994 25334633 . + . ID=GSCOCT00030183001;Parent=GSCOCG00030183001;Name=Cc01_g07450 | |
| 9233 chr1 manual_curation polypeptide 25330994 25334469 . + . ID=GSCOCP00030183001;Dbxref=GENE3D:G3DSA:2.60.200.20,InterPro:IPR000253,InterPro:IPR008984,PFAM:PF00498,PROFILE:PS50006,SMART:SM00240,SUPERFAMILY:SSF49879,TAIR:AT2G21530.1,TrEMBL:A9PJ84,TrEMBL:B9HQF5,TrEMBL:F6H9Z6;Derives_from=GSCOCT00030183001;Name=Cc01_g07450;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030183001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=join(2438334..2438568%2C2439122..2439186%2C2439262..2439322%2C2439818..2439964%2C2441703..2441809);owner=coffea | |
| 9234 chr1 manual_curation exon 25330994 25331228 . + . Parent=GSCOCT00030183001 | |
| 9235 chr1 manual_curation exon 25331782 25331846 . + . Parent=GSCOCT00030183001 | |
| 9236 chr1 manual_curation exon 25331922 25331982 . + . Parent=GSCOCT00030183001 | |
| 9237 chr1 manual_curation exon 25332478 25332624 . + . Parent=GSCOCT00030183001 | |
| 9238 chr1 manual_curation exon 25334363 25334633 . + . Parent=GSCOCT00030183001 | |
| 9239 chr1 manual_curation CDS 25330994 25331228 . + 0 Parent=GSCOCT00030183001 | |
| 9240 chr1 manual_curation CDS 25331782 25331846 . + 1 Parent=GSCOCT00030183001 | |
| 9241 chr1 manual_curation CDS 25331922 25331982 . + 0 Parent=GSCOCT00030183001 | |
| 9242 chr1 manual_curation CDS 25332478 25332624 . + 1 Parent=GSCOCT00030183001 | |
| 9243 chr1 manual_curation CDS 25334363 25334469 . + 1 Parent=GSCOCT00030183001 | |
| 9244 chr1 manual_curation gene 25335924 25337588 . - . ID=GSCOCG00030185001;Name=Cc01_g07460 | |
| 9245 chr1 manual_curation mRNA 25335924 25337588 . - . ID=GSCOCT00030185001;Parent=GSCOCG00030185001;Name=Cc01_g07460 | |
| 9246 chr1 manual_curation polypeptide 25335924 25337588 . - . ID=GSCOCP00030185001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR001810,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019775,InterPro:IPR019781,InterPro:IPR019782,InterPro:IPR022364,PFAM:PF00400,PFAM:PF00646,PROFILE:PS50082,PROFILE:PS50181,PROFILE:PS50294,PROSITE:PS00678,SMART:SM00256,SMART:SM00320,SUPERFAMILY:SSF50978,SUPERFAMILY:SSF81383,SwissProt:C5FP68,SwissProt:D4D8P3,SwissProt:Q94AD8,TAIR:AT5G21040.1,TrEMBL:B9HQE5,TrEMBL:B9S6L1,TrEMBL:F6H9Y9;Derives_from=GSCOCT00030185001;Name=Cc01_g07460;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.7.11.7,PRODUCT:F-box/WD-40 repeat-containing protein At5g21040,CC_functional_completeness:complete,CC_gene:At5g21040,CC_gene:sconB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030185001~ F-box/WD-40 repeat-containing protein At5g21040~ At5g21040~ complete;original_location=complement(2443264..2444928);owner=coffea | |
| 9247 chr1 manual_curation exon 25335924 25337588 . - . Parent=GSCOCT00030185001 | |
| 9248 chr1 manual_curation CDS 25335924 25337588 . - 0 Parent=GSCOCT00030185001 | |
| 9249 chr1 manual_curation gene 25337687 25338295 . + . ID=GSCOCG00030186001;Name=Cc01_g07470 | |
| 9250 chr1 manual_curation mRNA 25337687 25338295 . + . ID=GSCOCT00030186001;Parent=GSCOCG00030186001;Name=Cc01_g07470 | |
| 9251 chr1 manual_curation polypeptide 25338083 25338295 . + . ID=GSCOCP00030186001;Derives_from=GSCOCT00030186001;Name=Cc01_g07470;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00030186001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=2445423..2445635;owner=coffea | |
| 9252 chr1 manual_curation exon 25337687 25338295 . + . Parent=GSCOCT00030186001 | |
| 9253 chr1 manual_curation CDS 25338083 25338295 . + 0 Parent=GSCOCT00030186001 | |
| 9254 chr1 manual_curation gene 25394583 25394864 . + . ID=GSCOCG00009395001;Name=Cc01_g07480 | |
| 9255 chr1 manual_curation mRNA 25394583 25394864 . + . ID=GSCOCT00009395001;Parent=GSCOCG00009395001;Name=Cc01_g07480 | |
| 9256 chr1 manual_curation polypeptide 25394583 25394864 . + . ID=GSCOCP00009395001;Dbxref=TrEMBL:F6HNF8,TrEMBL:Q76DX9,TrEMBL:Q76DY3;Derives_from=GSCOCT00009395001;Name=Cc01_g07480;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:AG-motif binding protein-1,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009395001~ AG-motif binding protein-1~ unknown_gene~ fragment;original_location=complement(225190..225471);owner=coffea | |
| 9257 chr1 manual_curation exon 25394583 25394864 . + . Parent=GSCOCT00009395001 | |
| 9258 chr1 manual_curation CDS 25394583 25394864 . + 0 Parent=GSCOCT00009395001 | |
| 9259 chr1 manual_curation gene 25430568 25432924 . + . ID=GSCOCG00009391001;Name=Cc01_g07490 | |
| 9260 chr1 manual_curation mRNA 25430568 25432924 . + . ID=GSCOCT00009391001;Parent=GSCOCG00009391001;Name=Cc01_g07490 | |
| 9261 chr1 manual_curation polypeptide 25430568 25432472 . + . ID=GSCOCP00009391001;Dbxref=InterPro:IPR006957,PFAM:PF04873,SwissProt:O23116,SwissProt:O24606,SwissProt:Q9SLH0,TAIR:AT1G73730.1,TAIR:AT2G27050.1,TAIR:AT3G20770.1,TrEMBL:Q84QD3,TrEMBL:Q84QD4,TrEMBL:Q9ZWK1;Derives_from=GSCOCT00009391001;Name=Cc01_g07490;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0030528,CC_EC_number:missing_EC_number,PRODUCT:Protein ETHYLENE INSENSITIVE 3,CC_functional_completeness:complete,CC_gene:EIN3,CC_gene:EIL1,CC_gene:EIL3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009391001~ Protein ETHYLENE INSENSITIVE 3~ EIN3~ complete;original_location=complement(187582..189486);owner=coffea | |
| 9262 chr1 manual_curation exon 25430568 25432924 . + . Parent=GSCOCT00009391001 | |
| 9263 chr1 manual_curation CDS 25430568 25432472 . + 0 Parent=GSCOCT00009391001 | |
| 9264 chr1 manual_curation gene 25434742 25441548 . - . ID=GSCOCG00009390001;Name=Cc01_g07500 | |
| 9265 chr1 manual_curation mRNA 25434742 25441548 . - . ID=GSCOCT00009390001;Parent=GSCOCG00009390001;Name=Cc01_g07500 | |
| 9266 chr1 manual_curation polypeptide 25434944 25441513 . - . ID=GSCOCP00009390001;Dbxref=InterPro:IPR003854,PFAM:PF02704,SwissProt:P27057,SwissProt:P47926,SwissProt:Q6NMQ7,TAIR:AT1G74670.1,TAIR:AT2G30810.1,TAIR:AT5G15230.1,TrEMBL:A9XNT2,TrEMBL:A9XNT4,TrEMBL:A9XNT5;Derives_from=GSCOCT00009390001;Name=Cc01_g07500;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Gibberellin-regulated protein 6,CC_functional_completeness:complete,CC_gene:GASA6,CC_gene:GAST1,CC_gene:RSI-1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009390001~ Gibberellin-regulated protein 6~ GASA6~ complete;original_location=join(178541..178612%2C178977..179016%2C184929..185110);owner=coffea | |
| 9267 chr1 manual_curation exon 25441442 25441548 . - . Parent=GSCOCT00009390001 | |
| 9268 chr1 manual_curation exon 25441038 25441077 . - . Parent=GSCOCT00009390001 | |
| 9269 chr1 manual_curation exon 25434742 25435125 . - . Parent=GSCOCT00009390001 | |
| 9270 chr1 manual_curation CDS 25441442 25441513 . - 0 Parent=GSCOCT00009390001 | |
| 9271 chr1 manual_curation CDS 25441038 25441077 . - 0 Parent=GSCOCT00009390001 | |
| 9272 chr1 manual_curation CDS 25434944 25435125 . - 1 Parent=GSCOCT00009390001 | |
| 9273 chr1 manual_curation gene 25445316 25449065 . - . ID=GSCOCG00009389001;Name=Cc01_g07510 | |
| 9274 chr1 manual_curation mRNA 25445316 25449065 . - . ID=GSCOCT00009389001;Parent=GSCOCG00009389001;Name=Cc01_g07510 | |
| 9275 chr1 manual_curation polypeptide 25445316 25449065 . - . ID=GSCOCP00009389001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,InterPro:IPR021929,PFAM:PF00931,PFAM:PF12061,PRINTS:PR00364,SwissProt:Q6L3L0,SwissProt:Q6L403,SwissProt:Q8W1E0,TAIR:AT3G46530.1,TAIR:AT5G35450.1,TAIR:AT5G43470.1,TrEMBL:Q96485,TrEMBL:Q9LLD0,TrEMBL:Q9LLD4;Derives_from=GSCOCT00009389001;Name=Cc01_g07510;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative Late blight resistance protein R1-A,CC_functional_completeness:complete,CC_gene:R1A,CC_gene:R1B-23,CC_gene:R1B-17;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009389001~ Putative Late blight resistance protein R1-A~ R1A~ complete;original_location=170989..174738;owner=coffea | |
| 9276 chr1 manual_curation exon 25445316 25449065 . - . Parent=GSCOCT00009389001 | |
| 9277 chr1 manual_curation CDS 25445316 25449065 . - 0 Parent=GSCOCT00009389001 | |
| 9278 chr1 manual_curation gene 25462147 25466926 . + . ID=GSCOCG00009387001;Name=Cc01_g07520 | |
| 9279 chr1 manual_curation mRNA 25462147 25466926 . + . ID=GSCOCT00009387001;Parent=GSCOCG00009387001;Name=Cc01_g07520 | |
| 9280 chr1 manual_curation polypeptide 25462728 25466646 . + . ID=GSCOCP00009387001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR020635,PFAM:PF00560,PFAM:PF07714,PFAM:PF08263,PROFILE:PS50011,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:C0LGQ9,SwissProt:Q0WR59,SwissProt:Q9LYN8,TAIR:AT2G27060.1,TAIR:AT4G20940.1,TAIR:AT5G10020.1,TrEMBL:A5B7J2,TrEMBL:B9MYT0,TrEMBL:F6H9Z9;Derives_from=GSCOCT00009387001;Name=Cc01_g07520;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable inactive receptor kinase At5g10020,CC_functional_completeness:complete,CC_gene:At5g10020,CC_gene:At4g20940,CC_gene:EXS;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009387001~ Putative Probable inactive receptor kinase At5g10020~ At5g10020~ complete;original_location=complement(join(156423..157326%2C155101..156012%2C154464..155009%2C153408..154009));owner=coffea | |
| 9281 chr1 manual_curation exon 25466045 25466926 . + . Parent=GSCOCT00009387001 | |
| 9282 chr1 manual_curation exon 25465045 25465590 . + . Parent=GSCOCT00009387001 | |
| 9283 chr1 manual_curation exon 25464042 25464953 . + . Parent=GSCOCT00009387001 | |
| 9284 chr1 manual_curation exon 25462147 25463631 . + . Parent=GSCOCT00009387001 | |
| 9285 chr1 manual_curation CDS 25466045 25466646 . + 1 Parent=GSCOCT00009387001 | |
| 9286 chr1 manual_curation CDS 25465045 25465590 . + 1 Parent=GSCOCT00009387001 | |
| 9287 chr1 manual_curation CDS 25464042 25464953 . + 1 Parent=GSCOCT00009387001 | |
| 9288 chr1 manual_curation CDS 25462728 25463631 . + 0 Parent=GSCOCT00009387001 | |
| 9289 chr1 manual_curation gene 25482362 25483403 . + . ID=GSCOCG00009386001;Name=Cc01_g07530 | |
| 9290 chr1 manual_curation mRNA 25482362 25483403 . + . ID=GSCOCT00009386001;Parent=GSCOCG00009386001;Name=Cc01_g07530 | |
| 9291 chr1 manual_curation polypeptide 25482534 25483403 . + . ID=GSCOCP00009386001;Dbxref=InterPro:IPR004864,PFAM:PF03168,TAIR:AT1G65690.1,TAIR:AT2G27080.1,TAIR:AT5G21130.1,TrEMBL:B9HQ55,TrEMBL:D7LFJ6,TrEMBL:D7T1H6;Derives_from=GSCOCT00009386001;Name=Cc01_g07530;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009386001~ Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family~ unknown_gene~ complete;original_location=complement(136651..137520);owner=coffea | |
| 9292 chr1 manual_curation exon 25482362 25483403 . + . Parent=GSCOCT00009386001 | |
| 9293 chr1 manual_curation CDS 25482534 25483403 . + 0 Parent=GSCOCT00009386001 | |
| 9294 chr1 manual_curation gene 25483478 25493258 . - . ID=GSCOCG00009385001;Name=Cc01_g07540 | |
| 9295 chr1 manual_curation mRNA 25483478 25493258 . - . ID=GSCOCT00009385001;Parent=GSCOCG00009385001;Name=Cc01_g07540 | |
| 9296 chr1 manual_curation polypeptide 25483478 25491919 . - . ID=GSCOCP00009385001;Dbxref=InterPro:IPR006867,InterPro:IPR006868,PFAM:PF04782,PFAM:PF04783,TAIR:AT1G21740.1,TAIR:AT2G27090.1,TAIR:AT4G39790.1,TrEMBL:B9S6N5,TrEMBL:I1M7A7,TrEMBL:I1NE67;Derives_from=GSCOCT00009385001;Name=Cc01_g07540;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF630 and DUF632),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009385001~ Protein of unknown function (DUF630 and DUF632)~ unknown_gene~ complete;original_location=join(128135..129245%2C129749..129820%2C132345..132559%2C133864..134087%2C134798..135473%2C136517..136576);owner=coffea | |
| 9297 chr1 manual_curation exon 25493190 25493258 . - . Parent=GSCOCT00009385001 | |
| 9298 chr1 manual_curation exon 25490809 25491994 . - . Parent=GSCOCT00009385001 | |
| 9299 chr1 manual_curation exon 25490234 25490305 . - . Parent=GSCOCT00009385001 | |
| 9300 chr1 manual_curation exon 25487495 25487709 . - . Parent=GSCOCT00009385001 | |
| 9301 chr1 manual_curation exon 25485967 25486190 . - . Parent=GSCOCT00009385001 | |
| 9302 chr1 manual_curation exon 25484581 25485256 . - . Parent=GSCOCT00009385001 | |
| 9303 chr1 manual_curation exon 25483478 25483537 . - . Parent=GSCOCT00009385001 | |
| 9304 chr1 manual_curation CDS 25490809 25491919 . - 0 Parent=GSCOCT00009385001 | |
| 9305 chr1 manual_curation CDS 25490234 25490305 . - 1 Parent=GSCOCT00009385001 | |
| 9306 chr1 manual_curation CDS 25487495 25487709 . - 1 Parent=GSCOCT00009385001 | |
| 9307 chr1 manual_curation CDS 25485967 25486190 . - 0 Parent=GSCOCT00009385001 | |
| 9308 chr1 manual_curation CDS 25484581 25485256 . - 2 Parent=GSCOCT00009385001 | |
| 9309 chr1 manual_curation CDS 25483478 25483537 . - 0 Parent=GSCOCT00009385001 | |
| 9310 chr1 manual_curation gene 25502188 25507021 . - . ID=GSCOCG00009384001;Name=Cc01_g07550 | |
| 9311 chr1 manual_curation mRNA 25502188 25507021 . - . ID=GSCOCT00009384001;Parent=GSCOCG00009384001;Name=Cc01_g07550 | |
| 9312 chr1 manual_curation polypeptide 25502462 25506797 . - . ID=GSCOCP00009384001;Dbxref=TAIR:AT5G21070.1,TrEMBL:C6TMZ2,TrEMBL:D7T1H9,TrEMBL:Q940N6;Derives_from=GSCOCT00009384001;Name=Cc01_g07550;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B Has 115 Blast hits to 115 proteins in 34 species,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009384001~ unknown protein%3B Has 115 Blast hits to 115 proteins in 34 species: Archae - 1%3B Bacteria - 36%3B Metazoa - 0%3B Fungi - 0%3B Plants - 60%3B Viruses - 0%3B Other Eukaryotes - 18 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(113257..113410%2C116470..116797%2C117385..117592);owner=coffea | |
| 9313 chr1 manual_curation exon 25506644 25507021 . - . Parent=GSCOCT00009384001 | |
| 9314 chr1 manual_curation exon 25503257 25503584 . - . Parent=GSCOCT00009384001 | |
| 9315 chr1 manual_curation exon 25502188 25502669 . - . Parent=GSCOCT00009384001 | |
| 9316 chr1 manual_curation CDS 25506644 25506797 . - 0 Parent=GSCOCT00009384001 | |
| 9317 chr1 manual_curation CDS 25503257 25503584 . - 1 Parent=GSCOCT00009384001 | |
| 9318 chr1 manual_curation CDS 25502462 25502669 . - 2 Parent=GSCOCT00009384001 | |
| 9319 chr1 manual_curation gene 25509078 25517350 . - . ID=GSCOCG00009382001;Name=Cc01_g07560 | |
| 9320 chr1 manual_curation mRNA 25509078 25517350 . - . ID=GSCOCT00009382001;Parent=GSCOCG00009382001;Name=Cc01_g07560 | |
| 9321 chr1 manual_curation polypeptide 25509411 25513519 . - . ID=GSCOCP00009382001;Dbxref=HAMAP:MF_01109,InterPro:IPR002292,InterPro:IPR006130,InterPro:IPR006131,InterPro:IPR006132,PFAM:PF00185,PFAM:PF02729,PRINTS:PR00100,PRINTS:PR00102,SUPERFAMILY:SSF53671,SwissProt:O50039,SwissProt:Q43814,SwissProt:Q51742,TAIR:AT1G75330.1,TAIR:AT3G20330.1,TIGRFAMs:TIGR00658,TrEMBL:A9P9Z5,TrEMBL:B9R7X3,TrEMBL:E0CQF4;Derives_from=GSCOCT00009382001;Name=Cc01_g07560;Ontology_term=CC_evidence_code:ISS,GO:0004585,GO:0006520,GO:0009348,GO:0016597,GO:0016743,CC_EC_number:2.1.3.3,CC_EC_number:2.1.3.3,PRODUCT:Ornithine carbamoyltransferase%2C chloroplastic,CC_functional_completeness:complete,CC_gene:ARGF,CC_gene:OTC,CC_gene:argF;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009382001~ Ornithine carbamoyltransferase%2C chloroplastic~ ARGF~ complete;original_location=join(106535..106748%2C107674..107999%2C108696..108827%2C108928..109203%2C110461..110643);owner=coffea | |
| 9322 chr1 manual_curation exon 25516902 25517350 . - . Parent=GSCOCT00009382001 | |
| 9323 chr1 manual_curation exon 25513306 25513564 . - . Parent=GSCOCT00009382001 | |
| 9324 chr1 manual_curation exon 25512055 25512380 . - . Parent=GSCOCT00009382001 | |
| 9325 chr1 manual_curation exon 25511227 25511358 . - . Parent=GSCOCT00009382001 | |
| 9326 chr1 manual_curation exon 25510851 25511126 . - . Parent=GSCOCT00009382001 | |
| 9327 chr1 manual_curation exon 25509078 25509593 . - . Parent=GSCOCT00009382001 | |
| 9328 chr1 manual_curation CDS 25513306 25513519 . - 0 Parent=GSCOCT00009382001 | |
| 9329 chr1 manual_curation CDS 25512055 25512380 . - 1 Parent=GSCOCT00009382001 | |
| 9330 chr1 manual_curation CDS 25511227 25511358 . - 0 Parent=GSCOCT00009382001 | |
| 9331 chr1 manual_curation CDS 25510851 25511126 . - 0 Parent=GSCOCT00009382001 | |
| 9332 chr1 manual_curation CDS 25509411 25509593 . - 0 Parent=GSCOCT00009382001 | |
| 9333 chr1 manual_curation gene 25518126 25520581 . - . ID=GSCOCG00009381001;Name=Cc01_g07570 | |
| 9334 chr1 manual_curation mRNA 25518126 25520581 . - . ID=GSCOCT00009381001;Parent=GSCOCG00009381001;Name=Cc01_g07570 | |
| 9335 chr1 manual_curation polypeptide 25518461 25520366 . - . ID=GSCOCP00009381001;Dbxref=InterPro:IPR000231,InterPro:IPR004038,PANTHER:PTHR11449,PFAM:PF01248,PROSITE:PS00709,PROSITE:PS00993,SwissProt:O49884,SwissProt:Q8VZ19,SwissProt:Q9M5M6,TAIR:AT1G36240.1,TAIR:AT1G77940.1,TAIR:AT3G18740.1,TrEMBL:A7X6P5,TrEMBL:G7KSW7,TrEMBL:I1N4X6;Derives_from=GSCOCT00009381001;Name=Cc01_g07570;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:60S ribosomal protein L30,CC_functional_completeness:complete,CC_gene:RPL30,CC_gene:RPL30B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009381001~ 60S ribosomal protein L30~ RPL30~ complete;original_location=join(99688..99708%2C99798..99903%2C100410..100511%2C101400..101468%2C101553..101593);owner=coffea | |
| 9336 chr1 manual_curation exon 25520346 25520581 . - . Parent=GSCOCT00009381001 | |
| 9337 chr1 manual_curation exon 25520151 25520256 . - . Parent=GSCOCT00009381001 | |
| 9338 chr1 manual_curation exon 25519543 25519644 . - . Parent=GSCOCT00009381001 | |
| 9339 chr1 manual_curation exon 25518586 25518654 . - . Parent=GSCOCT00009381001 | |
| 9340 chr1 manual_curation exon 25518126 25518501 . - . Parent=GSCOCT00009381001 | |
| 9341 chr1 manual_curation CDS 25520346 25520366 . - 0 Parent=GSCOCT00009381001 | |
| 9342 chr1 manual_curation CDS 25520151 25520256 . - 0 Parent=GSCOCT00009381001 | |
| 9343 chr1 manual_curation CDS 25519543 25519644 . - 1 Parent=GSCOCT00009381001 | |
| 9344 chr1 manual_curation CDS 25518586 25518654 . - 1 Parent=GSCOCT00009381001 | |
| 9345 chr1 manual_curation CDS 25518461 25518501 . - 1 Parent=GSCOCT00009381001 | |
| 9346 chr1 manual_curation gene 25540629 25550602 . + . ID=GSCOCG00009380001;Name=Cc01_g07580 | |
| 9347 chr1 manual_curation mRNA 25540629 25550602 . + . ID=GSCOCT00009380001;Parent=GSCOCG00009380001;Name=Cc01_g07580 | |
| 9348 chr1 manual_curation polypeptide 25540845 25550602 . + . ID=GSCOCP00009380001;Dbxref=InterPro:IPR007042,InterPro:IPR007087,InterPro:IPR021933,PFAM:PF04959,PFAM:PF12066,PROSITE:PS00028,SwissProt:B4J497,SwissProt:B4MR46,SwissProt:Q9ZVD0,TAIR:AT2G27100.1,TrEMBL:A5ALP0,TrEMBL:B9S6M6,TrEMBL:D7T1I0;Derives_from=GSCOCT00009380001;Name=Cc01_g07580;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Serrate RNA effector molecule,CC_functional_completeness:complete,CC_gene:SE,CC_gene:Ars2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009380001~ Serrate RNA effector molecule~ SE~ complete;original_location=complement(join(78749..79209%2C75810..75919%2C73219..73276%2C72815..72889%2C72605..72679%2C72476..72523%2C72283..72351%2C71385..72179%2C71236..71284%2C69826..70100%2C69452..69719));owner=coffea | |
| 9349 chr1 manual_curation exon 25550335 25550602 . + . Parent=GSCOCT00009380001 | |
| 9350 chr1 manual_curation exon 25549954 25550228 . + . Parent=GSCOCT00009380001 | |
| 9351 chr1 manual_curation exon 25548770 25548818 . + . Parent=GSCOCT00009380001 | |
| 9352 chr1 manual_curation exon 25547875 25548669 . + . Parent=GSCOCT00009380001 | |
| 9353 chr1 manual_curation exon 25547703 25547771 . + . Parent=GSCOCT00009380001 | |
| 9354 chr1 manual_curation exon 25547531 25547578 . + . Parent=GSCOCT00009380001 | |
| 9355 chr1 manual_curation exon 25547375 25547449 . + . Parent=GSCOCT00009380001 | |
| 9356 chr1 manual_curation exon 25547165 25547239 . + . Parent=GSCOCT00009380001 | |
| 9357 chr1 manual_curation exon 25546778 25546835 . + . Parent=GSCOCT00009380001 | |
| 9358 chr1 manual_curation exon 25544135 25544244 . + . Parent=GSCOCT00009380001 | |
| 9359 chr1 manual_curation exon 25540629 25541305 . + . Parent=GSCOCT00009380001 | |
| 9360 chr1 manual_curation CDS 25550335 25550602 . + 2 Parent=GSCOCT00009380001 | |
| 9361 chr1 manual_curation CDS 25549954 25550228 . + 0 Parent=GSCOCT00009380001 | |
| 9362 chr1 manual_curation CDS 25548770 25548818 . + 2 Parent=GSCOCT00009380001 | |
| 9363 chr1 manual_curation CDS 25547875 25548669 . + 2 Parent=GSCOCT00009380001 | |
| 9364 chr1 manual_curation CDS 25547703 25547771 . + 2 Parent=GSCOCT00009380001 | |
| 9365 chr1 manual_curation CDS 25547531 25547578 . + 2 Parent=GSCOCT00009380001 | |
| 9366 chr1 manual_curation CDS 25547375 25547449 . + 2 Parent=GSCOCT00009380001 | |
| 9367 chr1 manual_curation CDS 25547165 25547239 . + 2 Parent=GSCOCT00009380001 | |
| 9368 chr1 manual_curation CDS 25546778 25546835 . + 1 Parent=GSCOCT00009380001 | |
| 9369 chr1 manual_curation CDS 25544135 25544244 . + 2 Parent=GSCOCT00009380001 | |
| 9370 chr1 manual_curation CDS 25540845 25541305 . + 0 Parent=GSCOCT00009380001 | |
| 9371 chr1 manual_curation gene 25563573 25567153 . + . ID=GSCOCG00009377001;Name=Cc01_g07590 | |
| 9372 chr1 manual_curation mRNA 25563573 25567153 . + . ID=GSCOCT00009377001;Parent=GSCOCG00009377001;Name=Cc01_g07590 | |
| 9373 chr1 manual_curation polypeptide 25563573 25566743 . + . ID=GSCOCP00009377001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR002198,InterPro:IPR002347,InterPro:IPR016040,InterPro:IPR020904,PANTHER:PTHR19410,PFAM:PF00106,PRINTS:PR00080,PRINTS:PR00081,PROSITE:PS00061,SwissProt:A4UHT7,SwissProt:Q9M2E2,SwissProt:Q9ZUH5,TAIR:AT1G01800.1,TAIR:AT2G24190.2,TAIR:AT3G61220.2,TrEMBL:A5AJE0,TrEMBL:B9S6K7,TrEMBL:G7J620;Derives_from=GSCOCT00009377001;Name=Cc01_g07590;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,GO:0016491,GO:0055114,CC_EC_number:1.1.1.197,PRODUCT:Putative ( )-neomenthol dehydrogenase,CC_functional_completeness:modules,CC_gene:SDR1,CC_gene:SDR2,CC_gene:SALR;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009377001~ Putative ( )-neomenthol dehydrogenase~ SDR1~ modules;original_location=complement(join(56297..56481%2C54621..54701%2C54278..54521%2C54048..54125%2C53785..53970%2C53311..53688));owner=coffea | |
| 9374 chr1 manual_curation exon 25566366 25567153 . + . Parent=GSCOCT00009377001 | |
| 9375 chr1 manual_curation exon 25566084 25566269 . + . Parent=GSCOCT00009377001 | |
| 9376 chr1 manual_curation exon 25565929 25566006 . + . Parent=GSCOCT00009377001 | |
| 9377 chr1 manual_curation exon 25565533 25565776 . + . Parent=GSCOCT00009377001 | |
| 9378 chr1 manual_curation exon 25565353 25565433 . + . Parent=GSCOCT00009377001 | |
| 9379 chr1 manual_curation exon 25563573 25563757 . + . Parent=GSCOCT00009377001 | |
| 9380 chr1 manual_curation CDS 25566366 25566743 . + 0 Parent=GSCOCT00009377001 | |
| 9381 chr1 manual_curation CDS 25566084 25566269 . + 0 Parent=GSCOCT00009377001 | |
| 9382 chr1 manual_curation CDS 25565929 25566006 . + 0 Parent=GSCOCT00009377001 | |
| 9383 chr1 manual_curation CDS 25565533 25565776 . + 2 Parent=GSCOCT00009377001 | |
| 9384 chr1 manual_curation CDS 25565353 25565433 . + 2 Parent=GSCOCT00009377001 | |
| 9385 chr1 manual_curation CDS 25563573 25563757 . + 0 Parent=GSCOCT00009377001 | |
| 9386 chr1 manual_curation gene 25569318 25576635 . - . ID=GSCOCG00009376001;Name=Cc01_g07600 | |
| 9387 chr1 manual_curation mRNA 25569318 25576635 . - . ID=GSCOCT00009376001;Parent=GSCOCG00009376001;Name=Cc01_g07600 | |
| 9388 chr1 manual_curation polypeptide 25569591 25576592 . - . ID=GSCOCP00009376001;Dbxref=InterPro:IPR001342,InterPro:IPR019811,PFAM:PF00742,PROSITE:PS01042,SwissProt:P00561,SwissProt:P27725,SwissProt:Q89AR4,TAIR:AT1G31230.1,TAIR:AT4G19710.2,TAIR:AT5G21060.2,TrEMBL:B9MYR6,TrEMBL:B9S6K6,TrEMBL:Q3S3F6;Derives_from=GSCOCT00009376001;Name=Cc01_g07600;Ontology_term=CC_evidence_code:ISS,GO:0006520,CC_EC_number:1.1.1.3,PRODUCT:Putative Bifunctional aspartokinase/homoserine dehydrogenase,CC_functional_completeness:fragment,CC_gene:thrA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009376001~ Putative Bifunctional aspartokinase/homoserine dehydrogenase~ thrA~ fragment;original_location=join(43462..43557%2C43663..43813%2C43927..44004%2C44770..44885%2C45097..45150%2C46088..46175%2C46302..46394%2C47143..47183%2C48294..48347%2C48427..48590%2C49534..49603%2C50338..50463);owner=coffea | |
| 9389 chr1 manual_curation exon 25576497 25576635 . - . Parent=GSCOCT00009376001 | |
| 9390 chr1 manual_curation exon 25576241 25576391 . - . Parent=GSCOCT00009376001 | |
| 9391 chr1 manual_curation exon 25576050 25576127 . - . Parent=GSCOCT00009376001 | |
| 9392 chr1 manual_curation exon 25575169 25575284 . - . Parent=GSCOCT00009376001 | |
| 9393 chr1 manual_curation exon 25574904 25574957 . - . Parent=GSCOCT00009376001 | |
| 9394 chr1 manual_curation exon 25573879 25573966 . - . Parent=GSCOCT00009376001 | |
| 9395 chr1 manual_curation exon 25573660 25573752 . - . Parent=GSCOCT00009376001 | |
| 9396 chr1 manual_curation exon 25572871 25572911 . - . Parent=GSCOCT00009376001 | |
| 9397 chr1 manual_curation exon 25571707 25571760 . - . Parent=GSCOCT00009376001 | |
| 9398 chr1 manual_curation exon 25571464 25571627 . - . Parent=GSCOCT00009376001 | |
| 9399 chr1 manual_curation exon 25570451 25570520 . - . Parent=GSCOCT00009376001 | |
| 9400 chr1 manual_curation exon 25569318 25569716 . - . Parent=GSCOCT00009376001 | |
| 9401 chr1 manual_curation CDS 25576497 25576592 . - 0 Parent=GSCOCT00009376001 | |
| 9402 chr1 manual_curation CDS 25576241 25576391 . - 0 Parent=GSCOCT00009376001 | |
| 9403 chr1 manual_curation CDS 25576050 25576127 . - 1 Parent=GSCOCT00009376001 | |
| 9404 chr1 manual_curation CDS 25575169 25575284 . - 1 Parent=GSCOCT00009376001 | |
| 9405 chr1 manual_curation CDS 25574904 25574957 . - 0 Parent=GSCOCT00009376001 | |
| 9406 chr1 manual_curation CDS 25573879 25573966 . - 0 Parent=GSCOCT00009376001 | |
| 9407 chr1 manual_curation CDS 25573660 25573752 . - 1 Parent=GSCOCT00009376001 | |
| 9408 chr1 manual_curation CDS 25572871 25572911 . - 1 Parent=GSCOCT00009376001 | |
| 9409 chr1 manual_curation CDS 25571707 25571760 . - 0 Parent=GSCOCT00009376001 | |
| 9410 chr1 manual_curation CDS 25571464 25571627 . - 0 Parent=GSCOCT00009376001 | |
| 9411 chr1 manual_curation CDS 25570451 25570520 . - 2 Parent=GSCOCT00009376001 | |
| 9412 chr1 manual_curation CDS 25569591 25569716 . - 0 Parent=GSCOCT00009376001 | |
| 9413 chr1 manual_curation gene 25578964 25587081 . + . ID=GSCOCG00009375001;Name=Cc01_g07610 | |
| 9414 chr1 manual_curation mRNA 25578964 25587081 . + . ID=GSCOCT00009375001;Parent=GSCOCG00009375001;Name=Cc01_g07610 | |
| 9415 chr1 manual_curation polypeptide 25579011 25586843 . + . ID=GSCOCP00009375001;Dbxref=GENE3D:G3DSA:3.90.960.10,InterPro:IPR007214,PFAM:PF04073,SUPERFAMILY:SSF55826,SwissProt:A1A4Q2,SwissProt:A6NEY8,SwissProt:Q9D820,TAIR:AT1G44835.2,TrEMBL:E0CR89,TrEMBL:I1KA77,TrEMBL:I1KA79;Derives_from=GSCOCT00009375001;Name=Cc01_g07610;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Prolyl-tRNA synthetase associated domain-containing protein 1,CC_functional_completeness:modules,CC_gene:PRORSD1,CC_gene:PRORSD1P,CC_gene:Prorsd1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009375001~ Putative Prolyl-tRNA synthetase associated domain-containing protein 1~ PRORSD1~ modules;original_location=complement(join(41005..41043%2C40828..40887%2C40692..40745%2C40530..40590%2C40331..40407%2C39137..39186%2C38938..39020%2C37481..37551%2C37253..37409%2C35701..35837%2C35527..35625%2C33211..33282));owner=coffea | |
| 9416 chr1 manual_curation exon 25586772 25587081 . + . Parent=GSCOCT00009375001 | |
| 9417 chr1 manual_curation exon 25584429 25584527 . + . Parent=GSCOCT00009375001 | |
| 9418 chr1 manual_curation exon 25584217 25584353 . + . Parent=GSCOCT00009375001 | |
| 9419 chr1 manual_curation exon 25582645 25582801 . + . Parent=GSCOCT00009375001 | |
| 9420 chr1 manual_curation exon 25582503 25582573 . + . Parent=GSCOCT00009375001 | |
| 9421 chr1 manual_curation exon 25581034 25581116 . + . Parent=GSCOCT00009375001 | |
| 9422 chr1 manual_curation exon 25580868 25580917 . + . Parent=GSCOCT00009375001 | |
| 9423 chr1 manual_curation exon 25579647 25579723 . + . Parent=GSCOCT00009375001 | |
| 9424 chr1 manual_curation exon 25579464 25579524 . + . Parent=GSCOCT00009375001 | |
| 9425 chr1 manual_curation exon 25579309 25579362 . + . Parent=GSCOCT00009375001 | |
| 9426 chr1 manual_curation exon 25579167 25579226 . + . Parent=GSCOCT00009375001 | |
| 9427 chr1 manual_curation exon 25578964 25579049 . + . Parent=GSCOCT00009375001 | |
| 9428 chr1 manual_curation CDS 25586772 25586843 . + 0 Parent=GSCOCT00009375001 | |
| 9429 chr1 manual_curation CDS 25584429 25584527 . + 0 Parent=GSCOCT00009375001 | |
| 9430 chr1 manual_curation CDS 25584217 25584353 . + 1 Parent=GSCOCT00009375001 | |
| 9431 chr1 manual_curation CDS 25582645 25582801 . + 0 Parent=GSCOCT00009375001 | |
| 9432 chr1 manual_curation CDS 25582503 25582573 . + 1 Parent=GSCOCT00009375001 | |
| 9433 chr1 manual_curation CDS 25581034 25581116 . + 2 Parent=GSCOCT00009375001 | |
| 9434 chr1 manual_curation CDS 25580868 25580917 . + 0 Parent=GSCOCT00009375001 | |
| 9435 chr1 manual_curation CDS 25579647 25579723 . + 1 Parent=GSCOCT00009375001 | |
| 9436 chr1 manual_curation CDS 25579464 25579524 . + 0 Parent=GSCOCT00009375001 | |
| 9437 chr1 manual_curation CDS 25579309 25579362 . + 0 Parent=GSCOCT00009375001 | |
| 9438 chr1 manual_curation CDS 25579167 25579226 . + 0 Parent=GSCOCT00009375001 | |
| 9439 chr1 manual_curation CDS 25579011 25579049 . + 0 Parent=GSCOCT00009375001 | |
| 9440 chr1 manual_curation gene 25593744 25596198 . + . ID=GSCOCG00009374001;Name=Cc01_g07620 | |
| 9441 chr1 manual_curation mRNA 25593744 25596198 . + . ID=GSCOCT00009374001;Parent=GSCOCG00009374001;Name=Cc01_g07620 | |
| 9442 chr1 manual_curation polypeptide 25593744 25596198 . + . ID=GSCOCP00009374001;Dbxref=InterPro:IPR003612,InterPro:IPR016140,PFAM:PF00234,SMART:SM00499,SUPERFAMILY:SSF47699,SwissProt:Q8VYI9,SwissProt:Q9ZQI8,SwissProt:Q9ZVC7,TAIR:AT2G13820.1,TAIR:AT2G27130.1,TAIR:AT3G43720.1,TrEMBL:B8AZH4,TrEMBL:C0KHK0,TrEMBL:Q6AVM8;Derives_from=GSCOCT00009374001;Name=Cc01_g07620;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:XYP11,CC_gene:At2g13820,CC_gene:At5g64080;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009374001~ Hypothetical protein~ XYP11~ missing_functional_completeness;original_location=complement(join(25770..26310%2C23856..23968));owner=coffea | |
| 9443 chr1 manual_curation exon 25596086 25596198 . + . Parent=GSCOCT00009374001 | |
| 9444 chr1 manual_curation exon 25593744 25594284 . + . Parent=GSCOCT00009374001 | |
| 9445 chr1 manual_curation CDS 25596086 25596198 . + 1 Parent=GSCOCT00009374001 | |
| 9446 chr1 manual_curation CDS 25593744 25594284 . + 0 Parent=GSCOCT00009374001 | |
| 9447 chr1 manual_curation gene 25610619 25612112 . - . ID=GSCOCG00009372001;Name=Cc01_g07630 | |
| 9448 chr1 manual_curation mRNA 25610619 25612112 . - . ID=GSCOCT00009372001;Parent=GSCOCG00009372001;Name=Cc01_g07630 | |
| 9449 chr1 manual_curation polypeptide 25610619 25612112 . - . ID=GSCOCP00009372001;Dbxref=InterPro:IPR000719,InterPro:IPR000961,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROFILE:PS51285,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:P42818,SwissProt:Q39030,SwissProt:Q8MYF1,TAIR:AT3G08720.1,TAIR:AT3G08730.1,TAIR:AT5G62310.1,TrEMBL:B9SRT9,TrEMBL:F6GXW1,TrEMBL:I1MB56;Derives_from=GSCOCT00009372001;Name=Cc01_g07630;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.11,PRODUCT:Serine/threonine-protein kinase AtPK2/AtPK19,CC_functional_completeness:complete,CC_gene:ATPK2,CC_gene:ATPK1,CC_gene:DDB_G0277449;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00009372001~ Serine/threonine-protein kinase AtPK2/AtPK19~ ATPK2~ complete;original_location=join(7942..9098%2C9372..9435);owner=coffea | |
| 9450 chr1 manual_curation exon 25610956 25612112 . - . Parent=GSCOCT00009372001 | |
| 9451 chr1 manual_curation exon 25610619 25610682 . - . Parent=GSCOCT00009372001 | |
| 9452 chr1 manual_curation CDS 25610956 25612112 . - 0 Parent=GSCOCT00009372001 | |
| 9453 chr1 manual_curation CDS 25610619 25610682 . - 2 Parent=GSCOCT00009372001 | |
| 9454 chr1 manual_curation gene 25625633 25631217 . - . ID=GSCOCG00015431001;Name=Cc01_g07640 | |
| 9455 chr1 manual_curation mRNA 25625633 25631217 . - . ID=GSCOCT00015431001;Parent=GSCOCG00015431001;Name=Cc01_g07640 | |
| 9456 chr1 manual_curation polypeptide 25625866 25631217 . - . ID=GSCOCP00015431001;Dbxref=InterPro:IPR001092,PROFILE:PS50888,SwissProt:P0C7P8,SwissProt:Q7XJU0,SwissProt:Q9XIN0,TAIR:AT1G06150.1,TAIR:AT1G64625.1,TAIR:AT2G27230.1,TrEMBL:A5B9A8,TrEMBL:B9RIZ8,TrEMBL:F6HAC3;Derives_from=GSCOCT00015431001;Name=Cc01_g07640;Ontology_term=CC_evidence_code:ISS,GO:0030528,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Transcription factor LHW,CC_functional_completeness:modules,CC_gene:LHW,CC_gene:BHLH157,CC_gene:EMB1444;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015431001~ Transcription factor LHW~ LHW~ modules;original_location=complement(join(10970..11064%2C9903..10103%2C9716..9797%2C9340..9381%2C9198..9257%2C8092..8966%2C7092..7974%2C6880..6981%2C6464..6604%2C6259..6384%2C5713..5889));owner=coffea | |
| 9457 chr1 manual_curation exon 25625633 25626042 . - . Parent=GSCOCT00015431001 | |
| 9458 chr1 manual_curation exon 25626412 25626537 . - . Parent=GSCOCT00015431001 | |
| 9459 chr1 manual_curation exon 25626617 25626757 . - . Parent=GSCOCT00015431001 | |
| 9460 chr1 manual_curation exon 25627033 25627134 . - . Parent=GSCOCT00015431001 | |
| 9461 chr1 manual_curation exon 25627245 25628127 . - . Parent=GSCOCT00015431001 | |
| 9462 chr1 manual_curation exon 25628245 25629119 . - . Parent=GSCOCT00015431001 | |
| 9463 chr1 manual_curation exon 25629351 25629410 . - . Parent=GSCOCT00015431001 | |
| 9464 chr1 manual_curation exon 25629493 25629534 . - . Parent=GSCOCT00015431001 | |
| 9465 chr1 manual_curation exon 25629869 25629950 . - . Parent=GSCOCT00015431001 | |
| 9466 chr1 manual_curation exon 25630056 25630256 . - . Parent=GSCOCT00015431001 | |
| 9467 chr1 manual_curation exon 25631123 25631217 . - . Parent=GSCOCT00015431001 | |
| 9468 chr1 manual_curation CDS 25625866 25626042 . - 0 Parent=GSCOCT00015431001 | |
| 9469 chr1 manual_curation CDS 25626412 25626537 . - 0 Parent=GSCOCT00015431001 | |
| 9470 chr1 manual_curation CDS 25626617 25626757 . - 0 Parent=GSCOCT00015431001 | |
| 9471 chr1 manual_curation CDS 25627033 25627134 . - 0 Parent=GSCOCT00015431001 | |
| 9472 chr1 manual_curation CDS 25627245 25628127 . - 2 Parent=GSCOCT00015431001 | |
| 9473 chr1 manual_curation CDS 25628245 25629119 . - 0 Parent=GSCOCT00015431001 | |
| 9474 chr1 manual_curation CDS 25629351 25629410 . - 0 Parent=GSCOCT00015431001 | |
| 9475 chr1 manual_curation CDS 25629493 25629534 . - 0 Parent=GSCOCT00015431001 | |
| 9476 chr1 manual_curation CDS 25629869 25629950 . - 2 Parent=GSCOCT00015431001 | |
| 9477 chr1 manual_curation CDS 25630056 25630256 . - 2 Parent=GSCOCT00015431001 | |
| 9478 chr1 manual_curation CDS 25631123 25631217 . - 0 Parent=GSCOCT00015431001 | |
| 9479 chr1 manual_curation gene 25631426 25631530 . - . ID=GSCOCG00015432001;Name=Cc01_g07650 | |
| 9480 chr1 manual_curation mRNA 25631426 25631530 . - . ID=GSCOCT00015432001;Parent=GSCOCG00015432001;Name=Cc01_g07650 | |
| 9481 chr1 manual_curation polypeptide 25631426 25631530 . - . ID=GSCOCP00015432001;Derives_from=GSCOCT00015432001;Name=Cc01_g07650;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015432001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(11273..11377);owner=coffea | |
| 9482 chr1 manual_curation exon 25631426 25631530 . - . Parent=GSCOCT00015432001 | |
| 9483 chr1 manual_curation CDS 25631426 25631530 . - 0 Parent=GSCOCT00015432001 | |
| 9484 chr1 manual_curation gene 25631633 25632393 . + . ID=GSCOCG00015433001;Name=Cc01_g07660 | |
| 9485 chr1 manual_curation mRNA 25631633 25632393 . + . ID=GSCOCT00015433001;Parent=GSCOCG00015433001;Name=Cc01_g07660 | |
| 9486 chr1 manual_curation polypeptide 25632157 25632393 . + . ID=GSCOCP00015433001;Derives_from=GSCOCT00015433001;Name=Cc01_g07660;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015433001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=12004..12240;owner=coffea | |
| 9487 chr1 manual_curation exon 25631633 25632393 . + . Parent=GSCOCT00015433001 | |
| 9488 chr1 manual_curation CDS 25632157 25632393 . + 0 Parent=GSCOCT00015433001 | |
| 9489 chr1 manual_curation gene 25666995 25671498 . + . ID=GSCOCG00015434001;Name=Cc01_g07670 | |
| 9490 chr1 manual_curation mRNA 25666995 25671498 . + . ID=GSCOCT00015434001;Parent=GSCOCG00015434001;Name=Cc01_g07670 | |
| 9491 chr1 manual_curation polypeptide 25667806 25671056 . + . ID=GSCOCP00015434001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001356,InterPro:IPR006563,InterPro:IPR009057,InterPro:IPR012287,PFAM:PF00046,PFAM:PF07526,PROFILE:PS50071,SMART:SM00389,SMART:SM00574,SUPERFAMILY:SSF46689,SwissProt:O65685,SwissProt:Q9SIW1,SwissProt:Q9SJ56,TAIR:AT2G16400.1,TAIR:AT2G35940.1,TAIR:AT4G34610.1,TrEMBL:A5AZH8,TrEMBL:F6HAC5,TrEMBL:I1M493;Derives_from=GSCOCT00015434001;Name=Cc01_g07670;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,GO:0043565,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative BEL1-like homeodomain protein 1,CC_functional_completeness:complete,CC_gene:BLH1,CC_gene:BLH7,CC_gene:BLH6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015434001~ Putative BEL1-like homeodomain protein 1~ BLH1~ complete;original_location=join(47653..48564%2C49433..49806%2C49916..49976%2C50073..50903);owner=coffea | |
| 9492 chr1 manual_curation exon 25666995 25668717 . + . Parent=GSCOCT00015434001 | |
| 9493 chr1 manual_curation exon 25669586 25669959 . + . Parent=GSCOCT00015434001 | |
| 9494 chr1 manual_curation exon 25670069 25670129 . + . Parent=GSCOCT00015434001 | |
| 9495 chr1 manual_curation exon 25670226 25671498 . + . Parent=GSCOCT00015434001 | |
| 9496 chr1 manual_curation CDS 25667806 25668717 . + 0 Parent=GSCOCT00015434001 | |
| 9497 chr1 manual_curation CDS 25669586 25669959 . + 0 Parent=GSCOCT00015434001 | |
| 9498 chr1 manual_curation CDS 25670069 25670129 . + 2 Parent=GSCOCT00015434001 | |
| 9499 chr1 manual_curation CDS 25670226 25671056 . + 0 Parent=GSCOCT00015434001 | |
| 9500 chr1 manual_curation gene 25677818 25680211 . + . ID=GSCOCG00015435001;Name=Cc01_g07680 | |
| 9501 chr1 manual_curation mRNA 25677818 25680211 . + . ID=GSCOCT00015435001;Parent=GSCOCG00015435001;Name=Cc01_g07680 | |
| 9502 chr1 manual_curation polypeptide 25677818 25680211 . + . ID=GSCOCP00015435001;Dbxref=GENE3D:G3DSA:3.40.50.200,InterPro:IPR000209,InterPro:IPR003137,InterPro:IPR009020,InterPro:IPR010259,InterPro:IPR015500,InterPro:IPR022398,PANTHER:PTHR10795,PFAM:PF00082,PFAM:PF02225,PFAM:PF05922,PRINTS:PR00723,PROSITE:PS00136,PROSITE:PS00138,SUPERFAMILY:SSF52743,SUPERFAMILY:SSF54897,SwissProt:O64495,SwissProt:O65351,SwissProt:Q39547,TAIR:AT3G14240.1,TAIR:AT4G34980.1,TAIR:AT5G67360.1,TrEMBL:B9N7H6,TrEMBL:F6HXP0,TrEMBL:Q9LUM3;Derives_from=GSCOCT00015435001;Name=Cc01_g07680;Ontology_term=CC_evidence_code:ISS,GO:0004252,GO:0006508,GO:0042802,GO:0043086,CC_EC_number:3.4.21.25,PRODUCT:Putative Subtilisin-like protease,CC_functional_completeness:complete,CC_gene:ARA12,CC_gene:SDD1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015435001~ Putative Subtilisin-like protease~ ARA12~ complete;original_location=57665..60058;owner=coffea | |
| 9503 chr1 manual_curation exon 25677818 25680211 . + . Parent=GSCOCT00015435001 | |
| 9504 chr1 manual_curation CDS 25677818 25680211 . + 0 Parent=GSCOCT00015435001 | |
| 9505 chr1 manual_curation gene 25729568 25736350 . + . ID=GSCOCG00015439001;Name=Cc01_g07690 | |
| 9506 chr1 manual_curation mRNA 25729568 25736350 . + . ID=GSCOCT00015439001;Parent=GSCOCG00015439001;Name=Cc01_g07690 | |
| 9507 chr1 manual_curation polypeptide 25729648 25735992 . + . ID=GSCOCP00015439001;Dbxref=SwissProt:Q7Z5L2,SwissProt:Q8BJM3,TAIR:AT5G22120.1,TrEMBL:A9PJQ9,TrEMBL:B9GHM5,TrEMBL:B9RJ01;Derives_from=GSCOCT00015439001;Name=Cc01_g07690;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:Gidrp88,CC_gene:GIDRP88;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015439001~ Putative unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: cultured cell%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ Gidrp88~ complete;original_location=join(109495..109775%2C110165..110262%2C110409..110474%2C112196..112438%2C112752..112913%2C114567..114656%2C115643..115839);owner=coffea | |
| 9508 chr1 manual_curation exon 25729568 25729928 . + . Parent=GSCOCT00015439001 | |
| 9509 chr1 manual_curation exon 25730318 25730415 . + . Parent=GSCOCT00015439001 | |
| 9510 chr1 manual_curation exon 25730562 25730627 . + . Parent=GSCOCT00015439001 | |
| 9511 chr1 manual_curation exon 25732349 25732591 . + . Parent=GSCOCT00015439001 | |
| 9512 chr1 manual_curation exon 25732905 25733066 . + . Parent=GSCOCT00015439001 | |
| 9513 chr1 manual_curation exon 25734720 25734809 . + . Parent=GSCOCT00015439001 | |
| 9514 chr1 manual_curation exon 25735796 25736350 . + . Parent=GSCOCT00015439001 | |
| 9515 chr1 manual_curation CDS 25729648 25729928 . + 0 Parent=GSCOCT00015439001 | |
| 9516 chr1 manual_curation CDS 25730318 25730415 . + 2 Parent=GSCOCT00015439001 | |
| 9517 chr1 manual_curation CDS 25730562 25730627 . + 1 Parent=GSCOCT00015439001 | |
| 9518 chr1 manual_curation CDS 25732349 25732591 . + 1 Parent=GSCOCT00015439001 | |
| 9519 chr1 manual_curation CDS 25732905 25733066 . + 1 Parent=GSCOCT00015439001 | |
| 9520 chr1 manual_curation CDS 25734720 25734809 . + 1 Parent=GSCOCT00015439001 | |
| 9521 chr1 manual_curation CDS 25735796 25735992 . + 1 Parent=GSCOCT00015439001 | |
| 9522 chr1 manual_curation gene 25770097 25771290 . - . ID=GSCOCG00015443001;Name=Cc01_g07700 | |
| 9523 chr1 manual_curation mRNA 25770097 25771290 . - . ID=GSCOCT00015443001;Parent=GSCOCG00015443001;Name=Cc01_g07700 | |
| 9524 chr1 manual_curation polypeptide 25770097 25771290 . - . ID=GSCOCP00015443001;Dbxref=GENE3D:G3DSA:1.25.10.10,InterPro:IPR003613,InterPro:IPR011989,InterPro:IPR016024,PFAM:PF04564,SMART:SM00504,SUPERFAMILY:SSF48371,SwissProt:Q84TG3,SwissProt:Q9SF15,SwissProt:Q9SVC6,TAIR:AT2G35930.1,TAIR:AT3G11840.1,TAIR:AT3G52450.1,TrEMBL:B9HQ75,TrEMBL:B9RJ04,TrEMBL:F6HAE5;Derives_from=GSCOCT00015443001;Name=Cc01_g07700;Ontology_term=CC_evidence_code:ISS,GO:0000151,GO:0004842,GO:0005488,GO:0016567,CC_EC_number:missing_EC_number,PRODUCT:E3 ubiquitin-protein ligase PUB23,CC_functional_completeness:complete,CC_gene:PUB23,CC_gene:PUB22,CC_gene:PUB24;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015443001~ E3 ubiquitin-protein ligase PUB23~ PUB23~ complete;original_location=complement(149944..151137);owner=coffea | |
| 9525 chr1 manual_curation exon 25770097 25771290 . - . Parent=GSCOCT00015443001 | |
| 9526 chr1 manual_curation CDS 25770097 25771290 . - 0 Parent=GSCOCT00015443001 | |
| 9527 chr1 manual_curation gene 25782193 25787162 . + . ID=GSCOCG00015444001;Name=Cc01_g07710 | |
| 9528 chr1 manual_curation mRNA 25782193 25787162 . + . ID=GSCOCT00015444001;Parent=GSCOCG00015444001;Name=Cc01_g07710 | |
| 9529 chr1 manual_curation polypeptide 25782392 25786895 . + . ID=GSCOCP00015444001;Dbxref=GENE3D:G3DSA:3.30.890.10,InterPro:IPR001739,InterPro:IPR016177,PFAM:PF01429,PROFILE:PS50982,SUPERFAMILY:SSF54171,SwissProt:Q9LW00,SwissProt:Q9XI36,TAIR:AT1G15340.1,TAIR:AT3G15790.1,TrEMBL:C6TKN4,TrEMBL:D7TCN5,TrEMBL:I1M5U1;Derives_from=GSCOCT00015444001;Name=Cc01_g07710;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0005634,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:MBD10,CC_gene:MBD11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015444001~ Hypothetical protein~ MBD10~ missing_functional_completeness;original_location=join(162239..162325%2C165523..165661%2C165958..166742);owner=coffea | |
| 9530 chr1 manual_curation exon 25782193 25782478 . + . Parent=GSCOCT00015444001 | |
| 9531 chr1 manual_curation exon 25785676 25785814 . + . Parent=GSCOCT00015444001 | |
| 9532 chr1 manual_curation exon 25786111 25787162 . + . Parent=GSCOCT00015444001 | |
| 9533 chr1 manual_curation CDS 25782392 25782478 . + 0 Parent=GSCOCT00015444001 | |
| 9534 chr1 manual_curation CDS 25785676 25785814 . + 0 Parent=GSCOCT00015444001 | |
| 9535 chr1 manual_curation CDS 25786111 25786895 . + 1 Parent=GSCOCT00015444001 | |
| 9536 chr1 manual_curation gene 25789283 25791228 . - . ID=GSCOCG00015445001;Name=Cc01_g07720 | |
| 9537 chr1 manual_curation mRNA 25789283 25791228 . - . ID=GSCOCT00015445001;Parent=GSCOCG00015445001;Name=Cc01_g07720 | |
| 9538 chr1 manual_curation polypeptide 25789283 25791228 . - . ID=GSCOCP00015445001;Dbxref=InterPro:IPR001650,InterPro:IPR011545,InterPro:IPR014001,InterPro:IPR014021,PFAM:PF00270,PFAM:PF00271,PROFILE:PS51192,PROFILE:PS51194,SMART:SM00487,SMART:SM00490,SwissProt:O75643,SwissProt:Q9U2G0,SwissProt:Q9VUV9,TAIR:AT1G20960.1,TAIR:AT2G42270.1,TAIR:AT5G61140.2,TrEMBL:A5BZG5,TrEMBL:B9RY79,TrEMBL:I1MJ51;Derives_from=GSCOCT00015445001;Name=Cc01_g07720;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0004386,GO:0005524,GO:0008026,CC_EC_number:missing_EC_number,PRODUCT:Putative U5 small nuclear ribonucleoprotein 200 kDa helicase,CC_functional_completeness:fragment,CC_gene:CG5931,CC_gene:SNRNP200,CC_gene:Y46G5A.4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015445001~ Putative U5 small nuclear ribonucleoprotein 200 kDa helicase~ CG5931~ fragment;original_location=complement(join(170332..171075%2C169531..170268%2C169130..169240));owner=coffea | |
| 9539 chr1 manual_curation exon 25789283 25789393 . - . Parent=GSCOCT00015445001 | |
| 9540 chr1 manual_curation exon 25789684 25790421 . - . Parent=GSCOCT00015445001 | |
| 9541 chr1 manual_curation exon 25790485 25791228 . - . Parent=GSCOCT00015445001 | |
| 9542 chr1 manual_curation CDS 25789283 25789393 . - 0 Parent=GSCOCT00015445001 | |
| 9543 chr1 manual_curation CDS 25789684 25790421 . - 0 Parent=GSCOCT00015445001 | |
| 9544 chr1 manual_curation CDS 25790485 25791228 . - 0 Parent=GSCOCT00015445001 | |
| 9545 chr1 manual_curation gene 25820908 25822518 . - . ID=GSCOCG00015446001;Name=Cc01_g07730 | |
| 9546 chr1 manual_curation mRNA 25820908 25822518 . - . ID=GSCOCT00015446001;Parent=GSCOCG00015446001;Name=Cc01_g07730 | |
| 9547 chr1 manual_curation polypeptide 25820908 25822518 . - . ID=GSCOCP00015446001;Dbxref=InterPro:IPR001650,PFAM:PF00271,PROFILE:PS51194,SMART:SM00490,SwissProt:O75643,SwissProt:Q9U2G0,SwissProt:Q9VUV9,TAIR:AT1G20960.1,TAIR:AT2G42270.1,TAIR:AT5G61140.2,TrEMBL:B9IFA9,TrEMBL:B9RY79,TrEMBL:I1KU63;Derives_from=GSCOCT00015446001;Name=Cc01_g07730;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0004386,GO:0005524,CC_EC_number:missing_EC_number,PRODUCT:Putative U5 small nuclear ribonucleoprotein 200 kDa helicase,CC_functional_completeness:fragment,CC_gene:CG5931,CC_gene:SNRNP200,CC_gene:Y46G5A.4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015446001~ Putative U5 small nuclear ribonucleoprotein 200 kDa helicase~ CG5931~ fragment;original_location=complement(join(202257..202365%2C201634..202202%2C201025..201129%2C200755..200814));owner=coffea | |
| 9548 chr1 manual_curation exon 25820908 25820967 . - . Parent=GSCOCT00015446001 | |
| 9549 chr1 manual_curation exon 25821178 25821282 . - . Parent=GSCOCT00015446001 | |
| 9550 chr1 manual_curation exon 25821787 25822355 . - . Parent=GSCOCT00015446001 | |
| 9551 chr1 manual_curation exon 25822410 25822518 . - . Parent=GSCOCT00015446001 | |
| 9552 chr1 manual_curation CDS 25820908 25820967 . - 0 Parent=GSCOCT00015446001 | |
| 9553 chr1 manual_curation CDS 25821178 25821282 . - 0 Parent=GSCOCT00015446001 | |
| 9554 chr1 manual_curation CDS 25821787 25822355 . - 1 Parent=GSCOCT00015446001 | |
| 9555 chr1 manual_curation CDS 25822410 25822518 . - 0 Parent=GSCOCT00015446001 | |
| 9556 chr1 manual_curation gene 25833668 25838273 . + . ID=GSCOCG00015448001;Name=Cc01_g07740 | |
| 9557 chr1 manual_curation mRNA 25833668 25838273 . + . ID=GSCOCT00015448001;Parent=GSCOCG00015448001;Name=Cc01_g07740 | |
| 9558 chr1 manual_curation polypeptide 25833864 25838160 . + . ID=GSCOCP00015448001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR011009,InterPro:IPR020635,PFAM:PF07714,PROFILE:PS50011,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q6R2K1,SwissProt:Q9FX99,SwissProt:Q9SFT7,TAIR:AT1G49730.1,TAIR:AT3G19300.1,TAIR:AT5G22050.2,TrEMBL:B9GHL1,TrEMBL:B9RQ53,TrEMBL:D7TCN6;Derives_from=GSCOCT00015448001;Name=Cc01_g07740;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable receptor-like protein kinase At1g49730,CC_functional_completeness:fragment,CC_gene:At1g49730,CC_gene:At3g07070,CC_gene:SRF5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015448001~ Putative Probable receptor-like protein kinase At1g49730~ At1g49730~ fragment;original_location=join(213711..213777%2C214580..214838%2C216396..216448%2C216534..216601%2C217256..217345%2C217578..217644%2C217718..218007);owner=coffea | |
| 9559 chr1 manual_curation exon 25833668 25833930 . + . Parent=GSCOCT00015448001 | |
| 9560 chr1 manual_curation exon 25834733 25834991 . + . Parent=GSCOCT00015448001 | |
| 9561 chr1 manual_curation exon 25836549 25836601 . + . Parent=GSCOCT00015448001 | |
| 9562 chr1 manual_curation exon 25836687 25836754 . + . Parent=GSCOCT00015448001 | |
| 9563 chr1 manual_curation exon 25837409 25837498 . + . Parent=GSCOCT00015448001 | |
| 9564 chr1 manual_curation exon 25837731 25837797 . + . Parent=GSCOCT00015448001 | |
| 9565 chr1 manual_curation exon 25837871 25838273 . + . Parent=GSCOCT00015448001 | |
| 9566 chr1 manual_curation CDS 25833864 25833930 . + 0 Parent=GSCOCT00015448001 | |
| 9567 chr1 manual_curation CDS 25834733 25834991 . + 1 Parent=GSCOCT00015448001 | |
| 9568 chr1 manual_curation CDS 25836549 25836601 . + 2 Parent=GSCOCT00015448001 | |
| 9569 chr1 manual_curation CDS 25836687 25836754 . + 1 Parent=GSCOCT00015448001 | |
| 9570 chr1 manual_curation CDS 25837409 25837498 . + 0 Parent=GSCOCT00015448001 | |
| 9571 chr1 manual_curation CDS 25837731 25837797 . + 0 Parent=GSCOCT00015448001 | |
| 9572 chr1 manual_curation CDS 25837871 25838160 . + 1 Parent=GSCOCT00015448001 | |
| 9573 chr1 manual_curation gene 25838359 25841849 . - . ID=GSCOCG00015449001;Name=Cc01_g07750 | |
| 9574 chr1 manual_curation mRNA 25838359 25841849 . - . ID=GSCOCT00015449001;Parent=GSCOCG00015449001;Name=Cc01_g07750 | |
| 9575 chr1 manual_curation polypeptide 25838866 25841756 . - . ID=GSCOCP00015449001;Dbxref=GENE3D:G3DSA:1.10.287.110,HAMAP:MF_01152,InterPro:IPR001305,InterPro:IPR001623,InterPro:IPR002939,InterPro:IPR003095,InterPro:IPR008971,InterPro:IPR012724,InterPro:IPR015609,InterPro:IPR018253,PANTHER:PTHR11821,PFAM:PF00226,PFAM:PF00684,PFAM:PF01556,PRINTS:PR00625,PROFILE:PS50076,PROFILE:PS51188,PROSITE:PS00636,SMART:SM00271,SUPERFAMILY:SSF46565,SUPERFAMILY:SSF49493,SUPERFAMILY:SSF57938,SwissProt:P42824,SwissProt:P43644,SwissProt:Q04960,TAIR:AT3G44110.1,TAIR:AT3G62600.1,TAIR:AT5G22060.1,TrEMBL:A9QTH2,TrEMBL:Q9ZSZ6,TrEMBL:Q9ZWK3;Derives_from=GSCOCT00015449001;Name=Cc01_g07750;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006457,GO:0009408,GO:0031072,GO:0051082,CC_EC_number:missing_EC_number,PRODUCT:DnaJ protein homolog ANJ1,CC_functional_completeness:complete,CC_gene:DNAJ1,CC_gene:LDJ2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015449001~ DnaJ protein homolog ANJ1~ DNAJ1~ complete;original_location=complement(join(221454..221603%2C220115..220283%2C219818..219953%2C219432..219708%2C219139..219337%2C218713..219035));owner=coffea | |
| 9576 chr1 manual_curation exon 25838359 25839188 . - . Parent=GSCOCT00015449001 | |
| 9577 chr1 manual_curation exon 25839292 25839490 . - . Parent=GSCOCT00015449001 | |
| 9578 chr1 manual_curation exon 25839585 25839861 . - . Parent=GSCOCT00015449001 | |
| 9579 chr1 manual_curation exon 25839971 25840106 . - . Parent=GSCOCT00015449001 | |
| 9580 chr1 manual_curation exon 25840268 25840436 . - . Parent=GSCOCT00015449001 | |
| 9581 chr1 manual_curation exon 25841607 25841849 . - . Parent=GSCOCT00015449001 | |
| 9582 chr1 manual_curation CDS 25838866 25839188 . - 1 Parent=GSCOCT00015449001 | |
| 9583 chr1 manual_curation CDS 25839292 25839490 . - 0 Parent=GSCOCT00015449001 | |
| 9584 chr1 manual_curation CDS 25839585 25839861 . - 2 Parent=GSCOCT00015449001 | |
| 9585 chr1 manual_curation CDS 25839971 25840106 . - 1 Parent=GSCOCT00015449001 | |
| 9586 chr1 manual_curation CDS 25840268 25840436 . - 0 Parent=GSCOCT00015449001 | |
| 9587 chr1 manual_curation CDS 25841607 25841756 . - 0 Parent=GSCOCT00015449001 | |
| 9588 chr1 manual_curation gene 25849838 25857331 . + . ID=GSCOCG00015451001;Name=Cc01_g07760 | |
| 9589 chr1 manual_curation mRNA 25849838 25857331 . + . ID=GSCOCT00015451001;Parent=GSCOCG00015451001;Name=Cc01_g07760 | |
| 9590 chr1 manual_curation polypeptide 25851699 25856714 . + . ID=GSCOCP00015451001;Dbxref=InterPro:IPR000048,PFAM:PF00612,PROFILE:PS50096,SMART:SM00015,SwissProt:Q8L4D8,SwissProt:Q8LPG9,SwissProt:Q9SF32,TAIR:AT1G72670.1,TAIR:AT2G26180.1,TAIR:AT3G22190.1,TrEMBL:B9GHL2,TrEMBL:B9RJ06,TrEMBL:F6HAF1;Derives_from=GSCOCT00015451001;Name=Cc01_g07760;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:IQ-domain 5,CC_functional_completeness:complete,CC_gene:IQD1,CC_gene:IQD14,CC_gene:IQD31;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015451001~ IQ-domain 5~ IQD1~ complete;original_location=join(231546..231629%2C232344..232589%2C233226..233453%2C234027..234140%2C235377..235899%2C236410..236561);owner=coffea | |
| 9591 chr1 manual_curation exon 25849838 25850074 . + . Parent=GSCOCT00015451001 | |
| 9592 chr1 manual_curation exon 25850341 25850454 . + . Parent=GSCOCT00015451001 | |
| 9593 chr1 manual_curation exon 25851674 25851782 . + . Parent=GSCOCT00015451001 | |
| 9594 chr1 manual_curation exon 25852497 25852742 . + . Parent=GSCOCT00015451001 | |
| 9595 chr1 manual_curation exon 25853379 25853606 . + . Parent=GSCOCT00015451001 | |
| 9596 chr1 manual_curation exon 25854180 25854293 . + . Parent=GSCOCT00015451001 | |
| 9597 chr1 manual_curation exon 25855530 25856052 . + . Parent=GSCOCT00015451001 | |
| 9598 chr1 manual_curation exon 25856563 25857331 . + . Parent=GSCOCT00015451001 | |
| 9599 chr1 manual_curation CDS 25851699 25851782 . + 0 Parent=GSCOCT00015451001 | |
| 9600 chr1 manual_curation CDS 25852497 25852742 . + 0 Parent=GSCOCT00015451001 | |
| 9601 chr1 manual_curation CDS 25853379 25853606 . + 0 Parent=GSCOCT00015451001 | |
| 9602 chr1 manual_curation CDS 25854180 25854293 . + 0 Parent=GSCOCT00015451001 | |
| 9603 chr1 manual_curation CDS 25855530 25856052 . + 0 Parent=GSCOCT00015451001 | |
| 9604 chr1 manual_curation CDS 25856563 25856714 . + 1 Parent=GSCOCT00015451001 | |
| 9605 chr1 manual_curation gene 25860442 25862974 . + . ID=GSCOCG00015452001;Name=Cc01_g07770 | |
| 9606 chr1 manual_curation mRNA 25860442 25862974 . + . ID=GSCOCT00015452001;Parent=GSCOCG00015452001;Name=Cc01_g07770 | |
| 9607 chr1 manual_curation polypeptide 25860630 25861718 . + . ID=GSCOCP00015452001;Dbxref=InterPro:IPR003406,PFAM:PF02485,TAIR:AT3G52060.1,TAIR:AT5G22070.1,TAIR:AT5G25330.1,TrEMBL:B9HKN1,TrEMBL:F6HAF0,TrEMBL:I1GPZ9;Derives_from=GSCOCT00015452001;Name=Cc01_g07770;Ontology_term=CC_evidence_code:ISS,GO:0008375,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Core-2/I-branching beta-1%2C6-N-acetylglucosaminyltransferase family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015452001~ Core-2/I-branching beta-1%2C6-N-acetylglucosaminyltransferase family protein~ unknown_gene~ complete;original_location=240477..241565;owner=coffea | |
| 9608 chr1 manual_curation exon 25860442 25862974 . + . Parent=GSCOCT00015452001 | |
| 9609 chr1 manual_curation CDS 25860630 25861718 . + 0 Parent=GSCOCT00015452001 | |
| 9610 chr1 manual_curation gene 25871282 25879592 . - . ID=GSCOCG00015453001;Name=Cc01_g07780 | |
| 9611 chr1 manual_curation mRNA 25871282 25879592 . - . ID=GSCOCT00015453001;Parent=GSCOCG00015453001;Name=Cc01_g07780 | |
| 9612 chr1 manual_curation polypeptide 25871805 25879420 . - . ID=GSCOCP00015453001;Dbxref=InterPro:IPR000184,PFAM:PF01103,SwissProt:A2X208,SwissProt:Q6H7M7,SwissProt:Q9C5J8,TAIR:AT3G44160.1,TAIR:AT3G48620.1,TAIR:AT5G19620.1,TrEMBL:D7T1Q7,TrEMBL:I1LU07,TrEMBL:I1M484;Derives_from=GSCOCT00015453001;Name=Cc01_g07780;Ontology_term=CC_evidence_code:ISS,GO:0019867,CC_EC_number:missing_EC_number,PRODUCT:Putative Outer envelope protein 80%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:OEP80;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015453001~ Putative Outer envelope protein 80%2C chloroplastic~ OEP80~ fragment;original_location=complement(join(259234..259267%2C258854..258920%2C258690..258725%2C258425..258569%2C257812..257970%2C257645..257715%2C257489..257567%2C257218..257333%2C256540..256687%2C252434..252503%2C251652..251809));owner=coffea | |
| 9613 chr1 manual_curation exon 25871282 25871962 . - . Parent=GSCOCT00015453001 | |
| 9614 chr1 manual_curation exon 25872587 25872656 . - . Parent=GSCOCT00015453001 | |
| 9615 chr1 manual_curation exon 25876693 25876840 . - . Parent=GSCOCT00015453001 | |
| 9616 chr1 manual_curation exon 25877371 25877486 . - . Parent=GSCOCT00015453001 | |
| 9617 chr1 manual_curation exon 25877642 25877720 . - . Parent=GSCOCT00015453001 | |
| 9618 chr1 manual_curation exon 25877798 25877868 . - . Parent=GSCOCT00015453001 | |
| 9619 chr1 manual_curation exon 25877965 25878123 . - . Parent=GSCOCT00015453001 | |
| 9620 chr1 manual_curation exon 25878578 25878722 . - . Parent=GSCOCT00015453001 | |
| 9621 chr1 manual_curation exon 25878843 25878878 . - . Parent=GSCOCT00015453001 | |
| 9622 chr1 manual_curation exon 25879007 25879073 . - . Parent=GSCOCT00015453001 | |
| 9623 chr1 manual_curation exon 25879387 25879592 . - . Parent=GSCOCT00015453001 | |
| 9624 chr1 manual_curation CDS 25871805 25871962 . - 1 Parent=GSCOCT00015453001 | |
| 9625 chr1 manual_curation CDS 25872587 25872656 . - 0 Parent=GSCOCT00015453001 | |
| 9626 chr1 manual_curation CDS 25876693 25876840 . - 2 Parent=GSCOCT00015453001 | |
| 9627 chr1 manual_curation CDS 25877371 25877486 . - 0 Parent=GSCOCT00015453001 | |
| 9628 chr1 manual_curation CDS 25877642 25877720 . - 2 Parent=GSCOCT00015453001 | |
| 9629 chr1 manual_curation CDS 25877798 25877868 . - 0 Parent=GSCOCT00015453001 | |
| 9630 chr1 manual_curation CDS 25877965 25878123 . - 0 Parent=GSCOCT00015453001 | |
| 9631 chr1 manual_curation CDS 25878578 25878722 . - 2 Parent=GSCOCT00015453001 | |
| 9632 chr1 manual_curation CDS 25878843 25878878 . - 2 Parent=GSCOCT00015453001 | |
| 9633 chr1 manual_curation CDS 25879007 25879073 . - 1 Parent=GSCOCT00015453001 | |
| 9634 chr1 manual_curation CDS 25879387 25879420 . - 0 Parent=GSCOCT00015453001 | |
| 9635 chr1 manual_curation gene 25884661 25891630 . + . ID=GSCOCG00015454001;Name=Cc01_g07790 | |
| 9636 chr1 manual_curation mRNA 25884661 25891630 . + . ID=GSCOCT00015454001;Parent=GSCOCG00015454001;Name=Cc01_g07790 | |
| 9637 chr1 manual_curation polypeptide 25884915 25891156 . + . ID=GSCOCP00015454001;Dbxref=InterPro:IPR002917,InterPro:IPR006073,PFAM:PF01926,PRINTS:PR00326,SwissProt:Q10190,SwissProt:Q6NY89,SwissProt:Q9W590,TAIR:AT1G08410.1,TAIR:AT1G52980.1,TAIR:AT2G27200.1,TrEMBL:B9HQ69,TrEMBL:B9RJ08,TrEMBL:F6HAE9;Derives_from=GSCOCT00015454001;Name=Cc01_g07790;Ontology_term=CC_evidence_code:ISS,GO:0005525,GO:0005622,CC_EC_number:missing_EC_number,PRODUCT:Putative Large subunit GTPase 1 homolog,CC_functional_completeness:complete,CC_gene:lsg1,CC_gene:ns3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015454001~ Putative Large subunit GTPase 1 homolog~ lsg1~ complete;original_location=join(264762..264985%2C267010..267029%2C267091..267115%2C267188..267274%2C268159..268252%2C269274..269330%2C269686..269765%2C269857..270922%2C270971..271003);owner=coffea | |
| 9638 chr1 manual_curation exon 25884661 25885138 . + . Parent=GSCOCT00015454001 | |
| 9639 chr1 manual_curation exon 25887163 25887182 . + . Parent=GSCOCT00015454001 | |
| 9640 chr1 manual_curation exon 25887244 25887268 . + . Parent=GSCOCT00015454001 | |
| 9641 chr1 manual_curation exon 25887341 25887427 . + . Parent=GSCOCT00015454001 | |
| 9642 chr1 manual_curation exon 25888312 25888405 . + . Parent=GSCOCT00015454001 | |
| 9643 chr1 manual_curation exon 25889427 25889483 . + . Parent=GSCOCT00015454001 | |
| 9644 chr1 manual_curation exon 25889839 25889918 . + . Parent=GSCOCT00015454001 | |
| 9645 chr1 manual_curation exon 25890010 25891075 . + . Parent=GSCOCT00015454001 | |
| 9646 chr1 manual_curation exon 25891124 25891630 . + . Parent=GSCOCT00015454001 | |
| 9647 chr1 manual_curation CDS 25884915 25885138 . + 0 Parent=GSCOCT00015454001 | |
| 9648 chr1 manual_curation CDS 25887163 25887182 . + 2 Parent=GSCOCT00015454001 | |
| 9649 chr1 manual_curation CDS 25887244 25887268 . + 1 Parent=GSCOCT00015454001 | |
| 9650 chr1 manual_curation CDS 25887341 25887427 . + 2 Parent=GSCOCT00015454001 | |
| 9651 chr1 manual_curation CDS 25888312 25888405 . + 2 Parent=GSCOCT00015454001 | |
| 9652 chr1 manual_curation CDS 25889427 25889483 . + 0 Parent=GSCOCT00015454001 | |
| 9653 chr1 manual_curation CDS 25889839 25889918 . + 0 Parent=GSCOCT00015454001 | |
| 9654 chr1 manual_curation CDS 25890010 25891075 . + 2 Parent=GSCOCT00015454001 | |
| 9655 chr1 manual_curation CDS 25891124 25891156 . + 0 Parent=GSCOCT00015454001 | |
| 9656 chr1 manual_curation gene 25892231 25898926 . + . ID=GSCOCG00015455001;Name=Cc01_g07800 | |
| 9657 chr1 manual_curation mRNA 25892231 25898926 . + . ID=GSCOCT00015455001;Parent=GSCOCG00015455001;Name=Cc01_g07800 | |
| 9658 chr1 manual_curation polypeptide 25892231 25898542 . + . ID=GSCOCP00015455001;Dbxref=InterPro:IPR002194,InterPro:IPR002423,InterPro:IPR012716,InterPro:IPR017998,PANTHER:PTHR11353,PANTHER:PTHR11353:SF23,PFAM:PF00118,PRINTS:PR00304,PROSITE:PS00750,PROSITE:PS00751,PROSITE:PS00995,SUPERFAMILY:SSF48592,SwissProt:P78371,SwissProt:Q3ZBH0,SwissProt:Q4R6F8,TAIR:AT3G11830.1,TAIR:AT3G20050.1,TAIR:AT5G20890.1,TIGRFAMs:TIGR02341,TrEMBL:A5C537;Derives_from=GSCOCT00015455001;Name=Cc01_g07800;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0005524,GO:0006457,GO:0044267,GO:0051082,CC_EC_number:missing_EC_number,PRODUCT:T-complex protein 1 subunit beta,CC_functional_completeness:complete,CC_gene:CCT2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015455001~ T-complex protein 1 subunit beta~ CCT2~ complete;original_location=join(272078..272131%2C272521..272747%2C273424..273487%2C273591..273647%2C273825..273890%2C273980..274091%2C274327..274455%2C275084..275155%2C275423..275538%2C275618..275694%2C276354..276839%2C277744..278059%2C278243..278389);owner=coffea | |
| 9659 chr1 manual_curation exon 25892231 25892284 . + . Parent=GSCOCT00015455001 | |
| 9660 chr1 manual_curation exon 25892674 25892900 . + . Parent=GSCOCT00015455001 | |
| 9661 chr1 manual_curation exon 25893577 25893640 . + . Parent=GSCOCT00015455001 | |
| 9662 chr1 manual_curation exon 25893744 25893800 . + . Parent=GSCOCT00015455001 | |
| 9663 chr1 manual_curation exon 25893978 25894043 . + . Parent=GSCOCT00015455001 | |
| 9664 chr1 manual_curation exon 25894133 25894244 . + . Parent=GSCOCT00015455001 | |
| 9665 chr1 manual_curation exon 25894480 25894608 . + . Parent=GSCOCT00015455001 | |
| 9666 chr1 manual_curation exon 25895237 25895308 . + . Parent=GSCOCT00015455001 | |
| 9667 chr1 manual_curation exon 25895576 25895691 . + . Parent=GSCOCT00015455001 | |
| 9668 chr1 manual_curation exon 25895771 25895847 . + . Parent=GSCOCT00015455001 | |
| 9669 chr1 manual_curation exon 25896507 25896992 . + . Parent=GSCOCT00015455001 | |
| 9670 chr1 manual_curation exon 25897897 25898212 . + . Parent=GSCOCT00015455001 | |
| 9671 chr1 manual_curation exon 25898396 25898926 . + . Parent=GSCOCT00015455001 | |
| 9672 chr1 manual_curation CDS 25892231 25892284 . + 0 Parent=GSCOCT00015455001 | |
| 9673 chr1 manual_curation CDS 25892674 25892900 . + 0 Parent=GSCOCT00015455001 | |
| 9674 chr1 manual_curation CDS 25893577 25893640 . + 2 Parent=GSCOCT00015455001 | |
| 9675 chr1 manual_curation CDS 25893744 25893800 . + 0 Parent=GSCOCT00015455001 | |
| 9676 chr1 manual_curation CDS 25893978 25894043 . + 0 Parent=GSCOCT00015455001 | |
| 9677 chr1 manual_curation CDS 25894133 25894244 . + 0 Parent=GSCOCT00015455001 | |
| 9678 chr1 manual_curation CDS 25894480 25894608 . + 1 Parent=GSCOCT00015455001 | |
| 9679 chr1 manual_curation CDS 25895237 25895308 . + 1 Parent=GSCOCT00015455001 | |
| 9680 chr1 manual_curation CDS 25895576 25895691 . + 1 Parent=GSCOCT00015455001 | |
| 9681 chr1 manual_curation CDS 25895771 25895847 . + 0 Parent=GSCOCT00015455001 | |
| 9682 chr1 manual_curation CDS 25896507 25896992 . + 2 Parent=GSCOCT00015455001 | |
| 9683 chr1 manual_curation CDS 25897897 25898212 . + 2 Parent=GSCOCT00015455001 | |
| 9684 chr1 manual_curation CDS 25898396 25898542 . + 0 Parent=GSCOCT00015455001 | |
| 9685 chr1 manual_curation gene 25907226 25918503 . + . ID=GSCOCG00015456001;Name=Cc01_g07810 | |
| 9686 chr1 manual_curation mRNA 25907226 25918503 . + . ID=GSCOCT00015456001;Parent=GSCOCG00015456001;Name=Cc01_g07810 | |
| 9687 chr1 manual_curation polypeptide 25907681 25917934 . + . ID=GSCOCP00015456001;Dbxref=GENE3D:G3DSA:2.120.10.80,InterPro:IPR004843,InterPro:IPR006186,InterPro:IPR011043,InterPro:IPR011498,InterPro:IPR012391,InterPro:IPR015915,PANTHER:PTHR11668,PFAM:PF00149,PFAM:PF07646,PIR:PIRSF036363,PRINTS:PR00114,PROSITE:PS00125,SMART:SM00156,SUPERFAMILY:SSF50965,SwissProt:O82734,SwissProt:P48482,SwissProt:Q60EX6,SwissProt:Q8L7U5,SwissProt:Q9LR78,SwissProt:Q9SHS7,SwissProt:Q9SJF0,TAIR:AT1G08420.1,TAIR:AT2G27210.1,TAIR:AT4G03080.1,TrEMBL:B9DFZ9,TrEMBL:D7KI22,TrEMBL:F6HAE8;Derives_from=GSCOCT00015456001;Name=Cc01_g07810;Ontology_term=CC_evidence_code:ISS,GO:0004721,GO:0005506,GO:0005515,GO:0016787,GO:0030145,CC_EC_number:3.1.3.16,CC_EC_number:3.1.3.16,PRODUCT:Serine/threonine-protein phosphatase BSL3,CC_functional_completeness:complete,CC_gene:BSL3,CC_gene:BSL2,CC_gene:BSL1,CC_gene:BSU1,CC_gene:TOPP2,CC_gene:TOPP8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015456001~ Serine/threonine-protein phosphatase BSL3~ BSL3~ complete;original_location=join(287528..287987%2C288415..288475%2C288600..288678%2C288773..288852%2C288955..289049%2C289209..289308%2C291650..291719%2C292426..292527%2C292615..292696%2C292825..293004%2C293241..293508%2C293598..293835%2C293936..294106%2C294415..294653%2C295711..295795%2C295891..295989%2C296065..296264%2C296347..296422%2C297105..297240%2C297381..297520%2C297620..297683%2C297768..297781);owner=coffea | |
| 9688 chr1 manual_curation exon 25907226 25908140 . + . Parent=GSCOCT00015456001 | |
| 9689 chr1 manual_curation exon 25908568 25908628 . + . Parent=GSCOCT00015456001 | |
| 9690 chr1 manual_curation exon 25908753 25908831 . + . Parent=GSCOCT00015456001 | |
| 9691 chr1 manual_curation exon 25908926 25909005 . + . Parent=GSCOCT00015456001 | |
| 9692 chr1 manual_curation exon 25909108 25909202 . + . Parent=GSCOCT00015456001 | |
| 9693 chr1 manual_curation exon 25909362 25909461 . + . Parent=GSCOCT00015456001 | |
| 9694 chr1 manual_curation exon 25911803 25911872 . + . Parent=GSCOCT00015456001 | |
| 9695 chr1 manual_curation exon 25912579 25912680 . + . Parent=GSCOCT00015456001 | |
| 9696 chr1 manual_curation exon 25912768 25912849 . + . Parent=GSCOCT00015456001 | |
| 9697 chr1 manual_curation exon 25912978 25913157 . + . Parent=GSCOCT00015456001 | |
| 9698 chr1 manual_curation exon 25913394 25913661 . + . Parent=GSCOCT00015456001 | |
| 9699 chr1 manual_curation exon 25913751 25913988 . + . Parent=GSCOCT00015456001 | |
| 9700 chr1 manual_curation exon 25914089 25914259 . + . Parent=GSCOCT00015456001 | |
| 9701 chr1 manual_curation exon 25914568 25914806 . + . Parent=GSCOCT00015456001 | |
| 9702 chr1 manual_curation exon 25915864 25915948 . + . Parent=GSCOCT00015456001 | |
| 9703 chr1 manual_curation exon 25916044 25916142 . + . Parent=GSCOCT00015456001 | |
| 9704 chr1 manual_curation exon 25916218 25916417 . + . Parent=GSCOCT00015456001 | |
| 9705 chr1 manual_curation exon 25916500 25916575 . + . Parent=GSCOCT00015456001 | |
| 9706 chr1 manual_curation exon 25917258 25917393 . + . Parent=GSCOCT00015456001 | |
| 9707 chr1 manual_curation exon 25917534 25917673 . + . Parent=GSCOCT00015456001 | |
| 9708 chr1 manual_curation exon 25917773 25917836 . + . Parent=GSCOCT00015456001 | |
| 9709 chr1 manual_curation exon 25917921 25918503 . + . Parent=GSCOCT00015456001 | |
| 9710 chr1 manual_curation CDS 25907681 25908140 . + 0 Parent=GSCOCT00015456001 | |
| 9711 chr1 manual_curation CDS 25908568 25908628 . + 1 Parent=GSCOCT00015456001 | |
| 9712 chr1 manual_curation CDS 25908753 25908831 . + 2 Parent=GSCOCT00015456001 | |
| 9713 chr1 manual_curation CDS 25908926 25909005 . + 0 Parent=GSCOCT00015456001 | |
| 9714 chr1 manual_curation CDS 25909108 25909202 . + 2 Parent=GSCOCT00015456001 | |
| 9715 chr1 manual_curation CDS 25909362 25909461 . + 1 Parent=GSCOCT00015456001 | |
| 9716 chr1 manual_curation CDS 25911803 25911872 . + 2 Parent=GSCOCT00015456001 | |
| 9717 chr1 manual_curation CDS 25912579 25912680 . + 0 Parent=GSCOCT00015456001 | |
| 9718 chr1 manual_curation CDS 25912768 25912849 . + 0 Parent=GSCOCT00015456001 | |
| 9719 chr1 manual_curation CDS 25912978 25913157 . + 1 Parent=GSCOCT00015456001 | |
| 9720 chr1 manual_curation CDS 25913394 25913661 . + 1 Parent=GSCOCT00015456001 | |
| 9721 chr1 manual_curation CDS 25913751 25913988 . + 2 Parent=GSCOCT00015456001 | |
| 9722 chr1 manual_curation CDS 25914089 25914259 . + 0 Parent=GSCOCT00015456001 | |
| 9723 chr1 manual_curation CDS 25914568 25914806 . + 0 Parent=GSCOCT00015456001 | |
| 9724 chr1 manual_curation CDS 25915864 25915948 . + 2 Parent=GSCOCT00015456001 | |
| 9725 chr1 manual_curation CDS 25916044 25916142 . + 0 Parent=GSCOCT00015456001 | |
| 9726 chr1 manual_curation CDS 25916218 25916417 . + 0 Parent=GSCOCT00015456001 | |
| 9727 chr1 manual_curation CDS 25916500 25916575 . + 2 Parent=GSCOCT00015456001 | |
| 9728 chr1 manual_curation CDS 25917258 25917393 . + 0 Parent=GSCOCT00015456001 | |
| 9729 chr1 manual_curation CDS 25917534 25917673 . + 1 Parent=GSCOCT00015456001 | |
| 9730 chr1 manual_curation CDS 25917773 25917836 . + 0 Parent=GSCOCT00015456001 | |
| 9731 chr1 manual_curation CDS 25917921 25917934 . + 1 Parent=GSCOCT00015456001 | |
| 9732 chr1 manual_curation gene 25918885 25922973 . - . ID=GSCOCG00015457001;Name=Cc01_g07820 | |
| 9733 chr1 manual_curation mRNA 25918885 25922973 . - . ID=GSCOCT00015457001;Parent=GSCOCG00015457001;Name=Cc01_g07820 | |
| 9734 chr1 manual_curation polypeptide 25919147 25922910 . - . ID=GSCOCP00015457001;Dbxref=GENE3D:G3DSA:1.10.287.110,InterPro:IPR001623,PFAM:PF00226,PROFILE:PS50076,SMART:SM00271,SUPERFAMILY:SSF46565,SwissProt:O75937,SwissProt:Q642C0,SwissProt:Q6NZB0,TAIR:AT1G65280.1,TAIR:AT5G22080.1,TrEMBL:B9GHL8,TrEMBL:D7T1Q4,TrEMBL:I1M488;Derives_from=GSCOCT00015457001;Name=Cc01_g07820;Ontology_term=CC_evidence_code:ISS,GO:0031072,CC_EC_number:missing_EC_number,PRODUCT:Putative DnaJ homolog subfamily C member 8,CC_functional_completeness:complete,CC_gene:Dnajc8,CC_gene:DNAJC8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015457001~ Putative DnaJ homolog subfamily C member 8~ Dnajc8~ complete;original_location=complement(join(302663..302757%2C301369..301459%2C301183..301243%2C300769..300846%2C300274..300347%2C299847..299960%2C299659..299766%2C299199..299237%2C298994..299080));owner=coffea | |
| 9735 chr1 manual_curation exon 25918885 25919233 . - . Parent=GSCOCT00015457001 | |
| 9736 chr1 manual_curation exon 25919352 25919390 . - . Parent=GSCOCT00015457001 | |
| 9737 chr1 manual_curation exon 25919812 25919919 . - . Parent=GSCOCT00015457001 | |
| 9738 chr1 manual_curation exon 25920000 25920113 . - . Parent=GSCOCT00015457001 | |
| 9739 chr1 manual_curation exon 25920427 25920500 . - . Parent=GSCOCT00015457001 | |
| 9740 chr1 manual_curation exon 25920922 25920999 . - . Parent=GSCOCT00015457001 | |
| 9741 chr1 manual_curation exon 25921336 25921396 . - . Parent=GSCOCT00015457001 | |
| 9742 chr1 manual_curation exon 25921522 25921612 . - . Parent=GSCOCT00015457001 | |
| 9743 chr1 manual_curation exon 25922816 25922973 . - . Parent=GSCOCT00015457001 | |
| 9744 chr1 manual_curation CDS 25919147 25919233 . - 0 Parent=GSCOCT00015457001 | |
| 9745 chr1 manual_curation CDS 25919352 25919390 . - 0 Parent=GSCOCT00015457001 | |
| 9746 chr1 manual_curation CDS 25919812 25919919 . - 0 Parent=GSCOCT00015457001 | |
| 9747 chr1 manual_curation CDS 25920000 25920113 . - 0 Parent=GSCOCT00015457001 | |
| 9748 chr1 manual_curation CDS 25920427 25920500 . - 1 Parent=GSCOCT00015457001 | |
| 9749 chr1 manual_curation CDS 25920922 25920999 . - 1 Parent=GSCOCT00015457001 | |
| 9750 chr1 manual_curation CDS 25921336 25921396 . - 0 Parent=GSCOCT00015457001 | |
| 9751 chr1 manual_curation CDS 25921522 25921612 . - 2 Parent=GSCOCT00015457001 | |
| 9752 chr1 manual_curation CDS 25922816 25922910 . - 0 Parent=GSCOCT00015457001 | |
| 9753 chr1 manual_curation gene 25927805 25930286 . - . ID=GSCOCG00015458001;Name=Cc01_g07830 | |
| 9754 chr1 manual_curation mRNA 25927805 25930286 . - . ID=GSCOCT00015458001;Parent=GSCOCG00015458001;Name=Cc01_g07830 | |
| 9755 chr1 manual_curation polypeptide 25927805 25929825 . - . ID=GSCOCP00015458001;Dbxref=InterPro:IPR021410,PFAM:PF11250,SwissProt:Q0V865,SwissProt:Q8GXU9,TAIR:AT1G03170.1,TAIR:AT5G19260.1,TAIR:AT5G22090.1,TrEMBL:B9GHM0,TrEMBL:B9HQ73,TrEMBL:B9RJ16;Derives_from=GSCOCT00015458001;Name=Cc01_g07830;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein FAF-like%2C chloroplastic,CC_functional_completeness:modules,CC_gene:At5g22090,CC_gene:FAF2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015458001~ Putative Protein FAF-like%2C chloroplastic~ At5g22090~ modules;original_location=complement(join(309265..309672%2C308037..309225%2C307859..307889%2C307652..307730));owner=coffea | |
| 9756 chr1 manual_curation exon 25930143 25930286 . - . Parent=GSCOCT00015458001 | |
| 9757 chr1 manual_curation exon 25927805 25927883 . - . Parent=GSCOCT00015458001 | |
| 9758 chr1 manual_curation exon 25928012 25928042 . - . Parent=GSCOCT00015458001 | |
| 9759 chr1 manual_curation exon 25928190 25929378 . - . Parent=GSCOCT00015458001 | |
| 9760 chr1 manual_curation exon 25929418 25929881 . - . Parent=GSCOCT00015458001 | |
| 9761 chr1 manual_curation CDS 25927805 25927883 . - 2 Parent=GSCOCT00015458001 | |
| 9762 chr1 manual_curation CDS 25928012 25928042 . - 1 Parent=GSCOCT00015458001 | |
| 9763 chr1 manual_curation CDS 25928190 25929378 . - 0 Parent=GSCOCT00015458001 | |
| 9764 chr1 manual_curation CDS 25929418 25929825 . - 0 Parent=GSCOCT00015458001 | |
| 9765 chr1 manual_curation gene 25950332 25953681 . + . ID=GSCOCG00015459001;Name=Cc01_g07840 | |
| 9766 chr1 manual_curation mRNA 25950332 25953681 . + . ID=GSCOCT00015459001;Parent=GSCOCG00015459001;Name=Cc01_g07840 | |
| 9767 chr1 manual_curation polypeptide 25950639 25953346 . + . ID=GSCOCP00015459001;Dbxref=TAIR:AT5G22040.1,TrEMBL:B9RQ55,TrEMBL:D7T1M5,TrEMBL:I1LRM4;Derives_from=GSCOCT00015459001;Name=Cc01_g07840;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B Has 30201 Blast hits to 17322 proteins in 780 species,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015459001~ Putative unknown protein%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ unknown_gene~ fragment;original_location=join(330486..330552%2C332341..332588%2C332849..333193);owner=coffea | |
| 9768 chr1 manual_curation exon 25950332 25950705 . + . Parent=GSCOCT00015459001 | |
| 9769 chr1 manual_curation exon 25952494 25952741 . + . Parent=GSCOCT00015459001 | |
| 9770 chr1 manual_curation exon 25953002 25953681 . + . Parent=GSCOCT00015459001 | |
| 9771 chr1 manual_curation CDS 25950639 25950705 . + 0 Parent=GSCOCT00015459001 | |
| 9772 chr1 manual_curation CDS 25952494 25952741 . + 1 Parent=GSCOCT00015459001 | |
| 9773 chr1 manual_curation CDS 25953002 25953346 . + 0 Parent=GSCOCT00015459001 | |
| 9774 chr1 manual_curation gene 25956516 25967831 . + . ID=GSCOCG00015460001;Name=Cc01_g07850 | |
| 9775 chr1 manual_curation mRNA 25956516 25967831 . + . ID=GSCOCT00015460001;Parent=GSCOCG00015460001;Name=Cc01_g07850 | |
| 9776 chr1 manual_curation polypeptide 25956516 25967391 . + . ID=GSCOCP00015460001;Dbxref=InterPro:IPR001394,InterPro:IPR018200,PFAM:PF00443,PROFILE:PS50235,PROSITE:PS00972,PROSITE:PS00973,SwissProt:O22207,SwissProt:Q9C585,SwissProt:Q9ZSB5,TAIR:AT2G40930.1,TAIR:AT4G10570.1,TAIR:AT5G22030.2,TrEMBL:B9RQ57,TrEMBL:F6HAA6,TrEMBL:G7IRH1;Derives_from=GSCOCT00015460001;Name=Cc01_g07850;Ontology_term=CC_evidence_code:ISS,GO:0004221,GO:0006511,CC_EC_number:3.1.2.15,PRODUCT:Ubiquitin carboxyl-terminal hydrolase 8,CC_functional_completeness:complete,CC_gene:UBP8,CC_gene:UBP5,CC_gene:UBP10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015460001~ Ubiquitin carboxyl-terminal hydrolase 8~ UBP8~ complete;original_location=join(336363..336520%2C337356..337604%2C338297..338432%2C340322..340381%2C340461..340556%2C342265..342603%2C342978..343118%2C343315..343485%2C344095..344352%2C344465..344613%2C345303..345857%2C346582..346855%2C347116..347238);owner=coffea | |
| 9777 chr1 manual_curation exon 25956516 25956673 . + . Parent=GSCOCT00015460001 | |
| 9778 chr1 manual_curation exon 25957509 25957757 . + . Parent=GSCOCT00015460001 | |
| 9779 chr1 manual_curation exon 25958450 25958585 . + . Parent=GSCOCT00015460001 | |
| 9780 chr1 manual_curation exon 25960475 25960534 . + . Parent=GSCOCT00015460001 | |
| 9781 chr1 manual_curation exon 25960614 25960709 . + . Parent=GSCOCT00015460001 | |
| 9782 chr1 manual_curation exon 25962418 25962756 . + . Parent=GSCOCT00015460001 | |
| 9783 chr1 manual_curation exon 25963131 25963271 . + . Parent=GSCOCT00015460001 | |
| 9784 chr1 manual_curation exon 25963468 25963638 . + . Parent=GSCOCT00015460001 | |
| 9785 chr1 manual_curation exon 25964248 25964505 . + . Parent=GSCOCT00015460001 | |
| 9786 chr1 manual_curation exon 25964618 25964766 . + . Parent=GSCOCT00015460001 | |
| 9787 chr1 manual_curation exon 25965456 25966010 . + . Parent=GSCOCT00015460001 | |
| 9788 chr1 manual_curation exon 25966735 25967008 . + . Parent=GSCOCT00015460001 | |
| 9789 chr1 manual_curation exon 25967269 25967831 . + . Parent=GSCOCT00015460001 | |
| 9790 chr1 manual_curation CDS 25956516 25956673 . + 0 Parent=GSCOCT00015460001 | |
| 9791 chr1 manual_curation CDS 25957509 25957757 . + 2 Parent=GSCOCT00015460001 | |
| 9792 chr1 manual_curation CDS 25958450 25958585 . + 2 Parent=GSCOCT00015460001 | |
| 9793 chr1 manual_curation CDS 25960475 25960534 . + 0 Parent=GSCOCT00015460001 | |
| 9794 chr1 manual_curation CDS 25960614 25960709 . + 0 Parent=GSCOCT00015460001 | |
| 9795 chr1 manual_curation CDS 25962418 25962756 . + 0 Parent=GSCOCT00015460001 | |
| 9796 chr1 manual_curation CDS 25963131 25963271 . + 0 Parent=GSCOCT00015460001 | |
| 9797 chr1 manual_curation CDS 25963468 25963638 . + 0 Parent=GSCOCT00015460001 | |
| 9798 chr1 manual_curation CDS 25964248 25964505 . + 0 Parent=GSCOCT00015460001 | |
| 9799 chr1 manual_curation CDS 25964618 25964766 . + 0 Parent=GSCOCT00015460001 | |
| 9800 chr1 manual_curation CDS 25965456 25966010 . + 2 Parent=GSCOCT00015460001 | |
| 9801 chr1 manual_curation CDS 25966735 25967008 . + 2 Parent=GSCOCT00015460001 | |
| 9802 chr1 manual_curation CDS 25967269 25967391 . + 0 Parent=GSCOCT00015460001 | |
| 9803 chr1 manual_curation gene 25974163 25983149 . - . ID=GSCOCG00015461001;Name=Cc01_g07860 | |
| 9804 chr1 manual_curation mRNA 25974163 25983149 . - . ID=GSCOCT00015461001;Parent=GSCOCG00015461001;Name=Cc01_g07860 | |
| 9805 chr1 manual_curation polypeptide 25974492 25982915 . - . ID=GSCOCP00015461001;Dbxref=InterPro:IPR006780,InterPro:IPR009071,PFAM:PF04690,SUPERFAMILY:SSF47095,SwissProt:Q10FZ7,SwissProt:Q8GW46,SwissProt:Q9XFB0,TAIR:AT1G08465.1,TAIR:AT2G26580.1,TAIR:AT2G45190.1,TrEMBL:A9PGB2,TrEMBL:D7T1M7,TrEMBL:Q6SRZ8;Derives_from=GSCOCT00015461001;Name=Cc01_g07860;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative axial regulator YABBY 2,CC_functional_completeness:complete,CC_gene:YAB2,CC_gene:YAB5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015461001~ Putative axial regulator YABBY 2~ YAB2~ complete;original_location=complement(join(362694..362762%2C360389..360508%2C359573..359699%2C358161..358209%2C357878..357953%2C354339..354458));owner=coffea | |
| 9806 chr1 manual_curation exon 25974163 25974611 . - . Parent=GSCOCT00015461001 | |
| 9807 chr1 manual_curation exon 25978031 25978106 . - . Parent=GSCOCT00015461001 | |
| 9808 chr1 manual_curation exon 25978314 25978362 . - . Parent=GSCOCT00015461001 | |
| 9809 chr1 manual_curation exon 25979726 25979852 . - . Parent=GSCOCT00015461001 | |
| 9810 chr1 manual_curation exon 25980542 25980661 . - . Parent=GSCOCT00015461001 | |
| 9811 chr1 manual_curation exon 25982847 25983149 . - . Parent=GSCOCT00015461001 | |
| 9812 chr1 manual_curation CDS 25974492 25974611 . - 0 Parent=GSCOCT00015461001 | |
| 9813 chr1 manual_curation CDS 25978031 25978106 . - 2 Parent=GSCOCT00015461001 | |
| 9814 chr1 manual_curation CDS 25978314 25978362 . - 1 Parent=GSCOCT00015461001 | |
| 9815 chr1 manual_curation CDS 25979726 25979852 . - 0 Parent=GSCOCT00015461001 | |
| 9816 chr1 manual_curation CDS 25980542 25980661 . - 0 Parent=GSCOCT00015461001 | |
| 9817 chr1 manual_curation CDS 25982847 25982915 . - 0 Parent=GSCOCT00015461001 | |
| 9818 chr1 manual_curation gene 26015790 26019446 . + . ID=GSCOCG00015464001;Name=Cc01_g07870 | |
| 9819 chr1 manual_curation mRNA 26015790 26019446 . + . ID=GSCOCT00015464001;Parent=GSCOCG00015464001;Name=Cc01_g07870 | |
| 9820 chr1 manual_curation polypeptide 26016026 26019051 . + . ID=GSCOCP00015464001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019775,InterPro:IPR019781,InterPro:IPR019782,InterPro:IPR020472,PFAM:PF00400,PRINTS:PR00320,PROFILE:PS50082,PROFILE:PS50294,PROSITE:PS00678,SMART:SM00320,SUPERFAMILY:SSF50978,SwissProt:O43071,SwissProt:O60508,SwissProt:Q9DC48,TAIR:AT1G10580.1,TAIR:AT3G49660.1,TAIR:AT5G54520.1,TrEMBL:B9HKV8,TrEMBL:B9HSV2,TrEMBL:G7I2L6;Derives_from=GSCOCT00015464001;Name=Cc01_g07870;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.7.11.7,PRODUCT:Putative Pre-mRNA-processing factor 17,CC_functional_completeness:complete,CC_gene:CDC40,CC_gene:Cdc40,CC_gene:prp17;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015464001~ Putative Pre-mRNA-processing factor 17~ CDC40~ complete;original_location=join(395873..396427%2C396482..397539%2C397958..398004%2C398750..398898);owner=coffea | |
| 9821 chr1 manual_curation exon 26015790 26016580 . + . Parent=GSCOCT00015464001 | |
| 9822 chr1 manual_curation exon 26016635 26017692 . + . Parent=GSCOCT00015464001 | |
| 9823 chr1 manual_curation exon 26018111 26018157 . + . Parent=GSCOCT00015464001 | |
| 9824 chr1 manual_curation exon 26018903 26019446 . + . Parent=GSCOCT00015464001 | |
| 9825 chr1 manual_curation CDS 26016026 26016580 . + 0 Parent=GSCOCT00015464001 | |
| 9826 chr1 manual_curation CDS 26016635 26017692 . + 0 Parent=GSCOCT00015464001 | |
| 9827 chr1 manual_curation CDS 26018111 26018157 . + 2 Parent=GSCOCT00015464001 | |
| 9828 chr1 manual_curation CDS 26018903 26019051 . + 1 Parent=GSCOCT00015464001 | |
| 9829 chr1 manual_curation gene 26020284 26022169 . - . ID=GSCOCG00015465001;Name=Cc01_g07880 | |
| 9830 chr1 manual_curation mRNA 26020284 26022169 . - . ID=GSCOCT00015465001;Parent=GSCOCG00015465001;Name=Cc01_g07880 | |
| 9831 chr1 manual_curation polypeptide 26020284 26021123 . - . ID=GSCOCP00015465001;Dbxref=InterPro:IPR012942,PFAM:PF07985,SwissProt:Q8GWZ6,SwissProt:Q8K2M3,SwissProt:Q9UH36,TAIR:AT5G59560.1,TrEMBL:A5B9I4,TrEMBL:B9GWW7,TrEMBL:G7IYV5;Derives_from=GSCOCT00015465001;Name=Cc01_g07880;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein SENSITIVITY TO RED LIGHT REDUCED 1,CC_functional_completeness:complete,CC_gene:SRR1,CC_gene:Srrd,CC_gene:SRRD;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015465001~ Protein SENSITIVITY TO RED LIGHT REDUCED 1~ SRR1~ complete;original_location=complement(400131..400970);owner=coffea | |
| 9832 chr1 manual_curation exon 26021936 26022169 . - . Parent=GSCOCT00015465001 | |
| 9833 chr1 manual_curation exon 26020284 26021212 . - . Parent=GSCOCT00015465001 | |
| 9834 chr1 manual_curation CDS 26020284 26021123 . - 0 Parent=GSCOCT00015465001 | |
| 9835 chr1 manual_curation gene 26023171 26032495 . - . ID=GSCOCG00015467001;Name=Cc01_g07890 | |
| 9836 chr1 manual_curation mRNA 26023171 26032495 . - . ID=GSCOCT00015467001;Parent=GSCOCG00015467001;Name=Cc01_g07890 | |
| 9837 chr1 manual_curation polypeptide 26023171 26032328 . - . ID=GSCOCP00015467001;Dbxref=GENE3D:G3DSA:3.40.980.10,InterPro:IPR001453,InterPro:IPR005110,InterPro:IPR005111,InterPro:IPR008284,InterPro:IPR020817,PFAM:PF00994,PFAM:PF03453,PFAM:PF03454,PROSITE:PS01078,PROSITE:PS01079,SMART:SM00852,SUPERFAMILY:SSF53218,SUPERFAMILY:SSF63867,SUPERFAMILY:SSF63882,SwissProt:Q39054,SwissProt:Q8BUV3,SwissProt:Q9NQX3,TAIR:AT5G20990.1,TIGRFAMs:TIGR00177,TrEMBL:B9HQF7,TrEMBL:B9RQ35,TrEMBL:G5DX78;Derives_from=GSCOCT00015467001;Name=Cc01_g07890;Ontology_term=CC_evidence_code:ISS,GO:0006777,GO:0032324,CC_EC_number:missing_EC_number,PRODUCT:Molybdopterin biosynthesis protein CNX1,CC_functional_completeness:complete,CC_gene:CNX1,CC_gene:GPHN,CC_gene:Gphn;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015467001~ Molybdopterin biosynthesis protein CNX1~ CNX1~ complete;original_location=complement(join(412023..412175%2C411143..411273%2C410302..410449%2C409908..410009%2C409674..409757%2C408363..408590%2C408062..408252%2C407794..407898%2C407357..407668%2C404957..405114%2C404374..404480%2C403916..403972%2C403018..403236));owner=coffea | |
| 9838 chr1 manual_curation exon 26023171 26023389 . - . Parent=GSCOCT00015467001 | |
| 9839 chr1 manual_curation exon 26024069 26024125 . - . Parent=GSCOCT00015467001 | |
| 9840 chr1 manual_curation exon 26024527 26024633 . - . Parent=GSCOCT00015467001 | |
| 9841 chr1 manual_curation exon 26025110 26025267 . - . Parent=GSCOCT00015467001 | |
| 9842 chr1 manual_curation exon 26027510 26027821 . - . Parent=GSCOCT00015467001 | |
| 9843 chr1 manual_curation exon 26027947 26028051 . - . Parent=GSCOCT00015467001 | |
| 9844 chr1 manual_curation exon 26028215 26028405 . - . Parent=GSCOCT00015467001 | |
| 9845 chr1 manual_curation exon 26028516 26028743 . - . Parent=GSCOCT00015467001 | |
| 9846 chr1 manual_curation exon 26029827 26029910 . - . Parent=GSCOCT00015467001 | |
| 9847 chr1 manual_curation exon 26030061 26030162 . - . Parent=GSCOCT00015467001 | |
| 9848 chr1 manual_curation exon 26030455 26030602 . - . Parent=GSCOCT00015467001 | |
| 9849 chr1 manual_curation exon 26031296 26031426 . - . Parent=GSCOCT00015467001 | |
| 9850 chr1 manual_curation exon 26032176 26032495 . - . Parent=GSCOCT00015467001 | |
| 9851 chr1 manual_curation CDS 26023171 26023389 . - 0 Parent=GSCOCT00015467001 | |
| 9852 chr1 manual_curation CDS 26024069 26024125 . - 0 Parent=GSCOCT00015467001 | |
| 9853 chr1 manual_curation CDS 26024527 26024633 . - 1 Parent=GSCOCT00015467001 | |
| 9854 chr1 manual_curation CDS 26025110 26025267 . - 2 Parent=GSCOCT00015467001 | |
| 9855 chr1 manual_curation CDS 26027510 26027821 . - 2 Parent=GSCOCT00015467001 | |
| 9856 chr1 manual_curation CDS 26027947 26028051 . - 2 Parent=GSCOCT00015467001 | |
| 9857 chr1 manual_curation CDS 26028215 26028405 . - 0 Parent=GSCOCT00015467001 | |
| 9858 chr1 manual_curation CDS 26028516 26028743 . - 0 Parent=GSCOCT00015467001 | |
| 9859 chr1 manual_curation CDS 26029827 26029910 . - 0 Parent=GSCOCT00015467001 | |
| 9860 chr1 manual_curation CDS 26030061 26030162 . - 0 Parent=GSCOCT00015467001 | |
| 9861 chr1 manual_curation CDS 26030455 26030602 . - 2 Parent=GSCOCT00015467001 | |
| 9862 chr1 manual_curation CDS 26031296 26031426 . - 0 Parent=GSCOCT00015467001 | |
| 9863 chr1 manual_curation CDS 26032176 26032328 . - 0 Parent=GSCOCT00015467001 | |
| 9864 chr1 manual_curation gene 26036074 26048765 . + . ID=GSCOCG00015468001;Name=Cc01_g07900 | |
| 9865 chr1 manual_curation mRNA 26036074 26048765 . + . ID=GSCOCT00015468001;Parent=GSCOCG00015468001;Name=Cc01_g07900 | |
| 9866 chr1 manual_curation polypeptide 26036778 26048292 . + . ID=GSCOCP00015468001;Dbxref=InterPro:IPR001357,InterPro:IPR003593,InterPro:IPR003959,InterPro:IPR008921,InterPro:IPR012178,InterPro:IPR013725,PFAM:PF00004,PFAM:PF00533,PFAM:PF08519,PIR:PIRSF036578,PROFILE:PS50172,SMART:SM00292,SMART:SM00382,SUPERFAMILY:SSF48019,SUPERFAMILY:SSF52113,SwissProt:P35251,SwissProt:P35600,SwissProt:P35601,TAIR:AT1G04730.1,TAIR:AT1G21690.3,TAIR:AT5G22010.1,TrEMBL:I1R119,TrEMBL:Q2R2B4,TrEMBL:Q84N08;Derives_from=GSCOCT00015468001;Name=Cc01_g07900;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003677,GO:0003689,GO:0005524,GO:0005622,GO:0005663,GO:0006260,GO:0017111,CC_EC_number:6.5.1.2,PRODUCT:replication factor C1,CC_functional_completeness:modules,CC_gene:RFC1,CC_gene:Rfc1,CC_gene:Gnf1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015468001~ replication factor C1~ RFC1~ modules;original_location=join(416625..416723%2C417003..417602%2C417680..417747%2C418063..418138%2C418210..418271%2C418360..418505%2C419304..419467%2C419575..419763%2C420185..420306%2C420383..420590%2C421842..421895%2C422726..422895%2C424003..424093%2C424927..425108%2C425215..425254%2C425752..425876%2C426249..426321%2C426404..426496%2C426585..426879%2C427785..427844%2C427994..428139);owner=coffea | |
| 9867 chr1 manual_curation exon 26036074 26036176 . + . Parent=GSCOCT00015468001 | |
| 9868 chr1 manual_curation exon 26036338 26036399 . + . Parent=GSCOCT00015468001 | |
| 9869 chr1 manual_curation exon 26036757 26036876 . + . Parent=GSCOCT00015468001 | |
| 9870 chr1 manual_curation exon 26037156 26037755 . + . Parent=GSCOCT00015468001 | |
| 9871 chr1 manual_curation exon 26037833 26037900 . + . Parent=GSCOCT00015468001 | |
| 9872 chr1 manual_curation exon 26038216 26038291 . + . Parent=GSCOCT00015468001 | |
| 9873 chr1 manual_curation exon 26038363 26038424 . + . Parent=GSCOCT00015468001 | |
| 9874 chr1 manual_curation exon 26038513 26038658 . + . Parent=GSCOCT00015468001 | |
| 9875 chr1 manual_curation exon 26039457 26039620 . + . Parent=GSCOCT00015468001 | |
| 9876 chr1 manual_curation exon 26039728 26039916 . + . Parent=GSCOCT00015468001 | |
| 9877 chr1 manual_curation exon 26040338 26040459 . + . Parent=GSCOCT00015468001 | |
| 9878 chr1 manual_curation exon 26040536 26040743 . + . Parent=GSCOCT00015468001 | |
| 9879 chr1 manual_curation exon 26041995 26042048 . + . Parent=GSCOCT00015468001 | |
| 9880 chr1 manual_curation exon 26042879 26043048 . + . Parent=GSCOCT00015468001 | |
| 9881 chr1 manual_curation exon 26044156 26044246 . + . Parent=GSCOCT00015468001 | |
| 9882 chr1 manual_curation exon 26045080 26045261 . + . Parent=GSCOCT00015468001 | |
| 9883 chr1 manual_curation exon 26045368 26045407 . + . Parent=GSCOCT00015468001 | |
| 9884 chr1 manual_curation exon 26045905 26046029 . + . Parent=GSCOCT00015468001 | |
| 9885 chr1 manual_curation exon 26046402 26046474 . + . Parent=GSCOCT00015468001 | |
| 9886 chr1 manual_curation exon 26046557 26046649 . + . Parent=GSCOCT00015468001 | |
| 9887 chr1 manual_curation exon 26046738 26047032 . + . Parent=GSCOCT00015468001 | |
| 9888 chr1 manual_curation exon 26047938 26047997 . + . Parent=GSCOCT00015468001 | |
| 9889 chr1 manual_curation exon 26048147 26048765 . + . Parent=GSCOCT00015468001 | |
| 9890 chr1 manual_curation CDS 26036778 26036876 . + 0 Parent=GSCOCT00015468001 | |
| 9891 chr1 manual_curation CDS 26037156 26037755 . + 0 Parent=GSCOCT00015468001 | |
| 9892 chr1 manual_curation CDS 26037833 26037900 . + 0 Parent=GSCOCT00015468001 | |
| 9893 chr1 manual_curation CDS 26038216 26038291 . + 2 Parent=GSCOCT00015468001 | |
| 9894 chr1 manual_curation CDS 26038363 26038424 . + 0 Parent=GSCOCT00015468001 | |
| 9895 chr1 manual_curation CDS 26038513 26038658 . + 2 Parent=GSCOCT00015468001 | |
| 9896 chr1 manual_curation CDS 26039457 26039620 . + 1 Parent=GSCOCT00015468001 | |
| 9897 chr1 manual_curation CDS 26039728 26039916 . + 0 Parent=GSCOCT00015468001 | |
| 9898 chr1 manual_curation CDS 26040338 26040459 . + 0 Parent=GSCOCT00015468001 | |
| 9899 chr1 manual_curation CDS 26040536 26040743 . + 2 Parent=GSCOCT00015468001 | |
| 9900 chr1 manual_curation CDS 26041995 26042048 . + 0 Parent=GSCOCT00015468001 | |
| 9901 chr1 manual_curation CDS 26042879 26043048 . + 0 Parent=GSCOCT00015468001 | |
| 9902 chr1 manual_curation CDS 26044156 26044246 . + 2 Parent=GSCOCT00015468001 | |
| 9903 chr1 manual_curation CDS 26045080 26045261 . + 0 Parent=GSCOCT00015468001 | |
| 9904 chr1 manual_curation CDS 26045368 26045407 . + 2 Parent=GSCOCT00015468001 | |
| 9905 chr1 manual_curation CDS 26045905 26046029 . + 0 Parent=GSCOCT00015468001 | |
| 9906 chr1 manual_curation CDS 26046402 26046474 . + 2 Parent=GSCOCT00015468001 | |
| 9907 chr1 manual_curation CDS 26046557 26046649 . + 0 Parent=GSCOCT00015468001 | |
| 9908 chr1 manual_curation CDS 26046738 26047032 . + 0 Parent=GSCOCT00015468001 | |
| 9909 chr1 manual_curation CDS 26047938 26047997 . + 1 Parent=GSCOCT00015468001 | |
| 9910 chr1 manual_curation CDS 26048147 26048292 . + 1 Parent=GSCOCT00015468001 | |
| 9911 chr1 manual_curation gene 26049755 26054228 . + . ID=GSCOCG00015469001;Name=Cc01_g07910 | |
| 9912 chr1 manual_curation mRNA 26049755 26054228 . + . ID=GSCOCT00015469001;Parent=GSCOCG00015469001;Name=Cc01_g07910 | |
| 9913 chr1 manual_curation polypeptide 26049862 26053904 . + . ID=GSCOCP00015469001;Dbxref=TAIR:AT1G08480.1,TrEMBL:A9P8C2,TrEMBL:B9RQ45,TrEMBL:C6SXG5;Derives_from=GSCOCT00015469001;Name=Cc01_g07910;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015469001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: mitochondrion%2C plasma membrane%2C plastid%2C vacuole%3B EXPRESSED IN: 27 plant structures%3B EXPRESSED DURING: 15 growth stages%3B Has 39 Blast hits to 39 proteins in 13 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 39%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(429709..429906%2C432226..432328%2C433600..433751);owner=coffea | |
| 9914 chr1 manual_curation exon 26049755 26050059 . + . Parent=GSCOCT00015469001 | |
| 9915 chr1 manual_curation exon 26052379 26052481 . + . Parent=GSCOCT00015469001 | |
| 9916 chr1 manual_curation exon 26053753 26054228 . + . Parent=GSCOCT00015469001 | |
| 9917 chr1 manual_curation CDS 26049862 26050059 . + 0 Parent=GSCOCT00015469001 | |
| 9918 chr1 manual_curation CDS 26052379 26052481 . + 0 Parent=GSCOCT00015469001 | |
| 9919 chr1 manual_curation CDS 26053753 26053904 . + 1 Parent=GSCOCT00015469001 | |
| 9920 chr1 manual_curation gene 26187988 26191195 . - . ID=GSCOCG00015471001;Name=Cc01_g07920 | |
| 9921 chr1 manual_curation mRNA 26187988 26191195 . - . ID=GSCOCT00015471001;Parent=GSCOCG00015471001;Name=Cc01_g07920 | |
| 9922 chr1 manual_curation polypeptide 26188491 26191195 . - . ID=GSCOCP00015471001;Dbxref=InterPro:IPR002182,PFAM:PF00931,SwissProt:Q60CZ8,SwissProt:Q6L400,SwissProt:Q6L438,TAIR:AT1G53350.1,TAIR:AT5G35450.1,TAIR:AT5G48620.1,TrEMBL:Q6L432,TrEMBL:Q9LLD0,TrEMBL:Q9LLD4;Derives_from=GSCOCT00015471001;Name=Cc01_g07920;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:R1B-16,CC_gene:R1A-6,CC_gene:R1A-10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015471001~ Hypothetical protein~ R1B-16~ missing_functional_completeness;original_location=complement(join(570610..571042%2C568584..570342%2C568338..568473));owner=coffea | |
| 9923 chr1 manual_curation exon 26187988 26188626 . - . Parent=GSCOCT00015471001 | |
| 9924 chr1 manual_curation exon 26188737 26190495 . - . Parent=GSCOCT00015471001 | |
| 9925 chr1 manual_curation exon 26190763 26191195 . - . Parent=GSCOCT00015471001 | |
| 9926 chr1 manual_curation CDS 26188491 26188626 . - 2 Parent=GSCOCT00015471001 | |
| 9927 chr1 manual_curation CDS 26188737 26190495 . - 1 Parent=GSCOCT00015471001 | |
| 9928 chr1 manual_curation CDS 26190763 26191195 . - 0 Parent=GSCOCT00015471001 | |
| 9929 chr1 manual_curation gene 26195001 26199401 . - . ID=GSCOCG00015473001;Name=Cc01_g07930 | |
| 9930 chr1 manual_curation mRNA 26195001 26199401 . - . ID=GSCOCT00015473001;Parent=GSCOCG00015473001;Name=Cc01_g07930 | |
| 9931 chr1 manual_curation polypeptide 26195001 26199401 . - . ID=GSCOCP00015473001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,InterPro:IPR021929,PFAM:PF00931,PFAM:PF12061,PRINTS:PR00364,SwissProt:Q6L3Z7,SwissProt:Q6L403,SwissProt:Q6L438,TAIR:AT1G50180.1,TAIR:AT1G59780.1,TAIR:AT3G46530.1,TrEMBL:Q6L432,TrEMBL:Q9LLD0,TrEMBL:Q9LLD4;Derives_from=GSCOCT00015473001;Name=Cc01_g07930;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1B-14,CC_functional_completeness:complete,CC_gene:R1B-14,CC_gene:R1B-17,CC_gene:R1A-6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015473001~ Putative late blight resistance protein homolog R1B-14~ R1B-14~ complete;original_location=complement(join(577460..579248%2C574848..577075));owner=coffea | |
| 9932 chr1 manual_curation exon 26195001 26197228 . - . Parent=GSCOCT00015473001 | |
| 9933 chr1 manual_curation exon 26197613 26199401 . - . Parent=GSCOCT00015473001 | |
| 9934 chr1 manual_curation CDS 26195001 26197228 . - 1 Parent=GSCOCT00015473001 | |
| 9935 chr1 manual_curation CDS 26197613 26199401 . - 0 Parent=GSCOCT00015473001 | |
| 9936 chr1 manual_curation gene 26212619 26216548 . - . ID=GSCOCG00015475001;Name=Cc01_g07940 | |
| 9937 chr1 manual_curation mRNA 26212619 26216548 . - . ID=GSCOCT00015475001;Parent=GSCOCG00015475001;Name=Cc01_g07940 | |
| 9938 chr1 manual_curation polypeptide 26212619 26216548 . - . ID=GSCOCP00015475001;Dbxref=InterPro:IPR000165,InterPro:IPR000767,InterPro:IPR002182,InterPro:IPR021929,PFAM:PF00931,PFAM:PF12061,PRINTS:PR00364,PROSITE:PS00820,SwissProt:Q6L3L0,SwissProt:Q6L3Z7,SwissProt:Q6L403,TAIR:AT1G59780.1,TAIR:AT3G46530.1,TAIR:AT3G46710.1,TrEMBL:Q96485,TrEMBL:Q9LLD0,TrEMBL:Q9LLD4;Derives_from=GSCOCT00015475001;Name=Cc01_g07940;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0005976,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1B-23,CC_functional_completeness:complete,CC_gene:R1B-14,CC_gene:R1B-17,CC_gene:R1B-23;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015475001~ Putative late blight resistance protein homolog R1B-23~ R1B-14~ complete;original_location=complement(592466..596395);owner=coffea | |
| 9939 chr1 manual_curation exon 26212619 26216548 . - . Parent=GSCOCT00015475001 | |
| 9940 chr1 manual_curation CDS 26212619 26216548 . - 0 Parent=GSCOCT00015475001 | |
| 9941 chr1 manual_curation gene 26238727 26241468 . - . ID=GSCOCG00015478001;Name=Cc01_g07950 | |
| 9942 chr1 manual_curation mRNA 26238727 26241468 . - . ID=GSCOCT00015478001;Parent=GSCOCG00015478001;Name=Cc01_g07950 | |
| 9943 chr1 manual_curation polypeptide 26238727 26241468 . - . ID=GSCOCP00015478001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,InterPro:IPR021929,PFAM:PF00931,PFAM:PF12061,PRINTS:PR00364,SwissProt:Q6L3Z7,SwissProt:Q6L400,SwissProt:Q6L403,TAIR:AT1G59620.1,TAIR:AT1G59780.1,TAIR:AT5G35450.1,TrEMBL:Q6L432,TrEMBL:Q96485,TrEMBL:Q9LLD0;Derives_from=GSCOCT00015478001;Name=Cc01_g07950;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1B-14,CC_functional_completeness:fragment,CC_gene:R1B-14,CC_gene:R1B-17,CC_gene:R1B-16;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015478001~ Putative late blight resistance protein homolog R1B-14~ R1B-14~ fragment;original_location=complement(618574..621315);owner=coffea | |
| 9944 chr1 manual_curation exon 26238727 26241468 . - . Parent=GSCOCT00015478001 | |
| 9945 chr1 manual_curation CDS 26238727 26241468 . - 0 Parent=GSCOCT00015478001 | |
| 9946 chr1 manual_curation gene 26248189 26252409 . - . ID=GSCOCG00015480001;Name=Cc01_g07960 | |
| 9947 chr1 manual_curation mRNA 26248189 26252409 . - . ID=GSCOCT00015480001;Parent=GSCOCG00015480001;Name=Cc01_g07960 | |
| 9948 chr1 manual_curation polypeptide 26248189 26251360 . - . ID=GSCOCP00015480001;Dbxref=InterPro:IPR001841,InterPro:IPR018957,PFAM:PF00097,PROFILE:PS50089,SMART:SM00184,SwissProt:Q4TU14,SwissProt:Q9ZT42,TAIR:AT4G14220.1,TAIR:AT5G22000.2,TrEMBL:B9GEQ0,TrEMBL:B9VRL0,TrEMBL:D7T1L9;Derives_from=GSCOCT00015480001;Name=Cc01_g07960;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:E3 ubiquitin-protein ligase RHF2A,CC_functional_completeness:complete,CC_gene:RHF2A,CC_gene:RHF1A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015480001~ E3 ubiquitin-protein ligase RHF2A~ RHF2A~ complete;original_location=complement(join(631076..631207%2C630934..630980%2C629394..629456%2C629174..629282%2C628702..629087%2C628443..628550%2C628036..628351));owner=coffea | |
| 9949 chr1 manual_curation exon 26248189 26248504 . - . Parent=GSCOCT00015480001 | |
| 9950 chr1 manual_curation exon 26248596 26248703 . - . Parent=GSCOCT00015480001 | |
| 9951 chr1 manual_curation exon 26248855 26249240 . - . Parent=GSCOCT00015480001 | |
| 9952 chr1 manual_curation exon 26249327 26249435 . - . Parent=GSCOCT00015480001 | |
| 9953 chr1 manual_curation exon 26249547 26249609 . - . Parent=GSCOCT00015480001 | |
| 9954 chr1 manual_curation exon 26251087 26251133 . - . Parent=GSCOCT00015480001 | |
| 9955 chr1 manual_curation exon 26251229 26252409 . - . Parent=GSCOCT00015480001 | |
| 9956 chr1 manual_curation CDS 26248189 26248504 . - 2 Parent=GSCOCT00015480001 | |
| 9957 chr1 manual_curation CDS 26248596 26248703 . - 2 Parent=GSCOCT00015480001 | |
| 9958 chr1 manual_curation CDS 26248855 26249240 . - 0 Parent=GSCOCT00015480001 | |
| 9959 chr1 manual_curation CDS 26249327 26249435 . - 2 Parent=GSCOCT00015480001 | |
| 9960 chr1 manual_curation CDS 26249547 26249609 . - 2 Parent=GSCOCT00015480001 | |
| 9961 chr1 manual_curation CDS 26251087 26251133 . - 0 Parent=GSCOCT00015480001 | |
| 9962 chr1 manual_curation CDS 26251229 26251360 . - 0 Parent=GSCOCT00015480001 | |
| 9963 chr1 manual_curation gene 26261034 26262249 . + . ID=GSCOCG00015481001;Name=Cc01_g07970 | |
| 9964 chr1 manual_curation mRNA 26261034 26262249 . + . ID=GSCOCT00015481001;Parent=GSCOCG00015481001;Name=Cc01_g07970 | |
| 9965 chr1 manual_curation polypeptide 26261730 26261939 . + . ID=GSCOCP00015481001;Derives_from=GSCOCT00015481001;Name=Cc01_g07970;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015481001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=641577..641786;owner=coffea | |
| 9966 chr1 manual_curation exon 26261034 26262249 . + . Parent=GSCOCT00015481001 | |
| 9967 chr1 manual_curation CDS 26261730 26261939 . + 0 Parent=GSCOCT00015481001 | |
| 9968 chr1 manual_curation gene 26267365 26272428 . - . ID=GSCOCG00015483001;Name=Cc01_g07980 | |
| 9969 chr1 manual_curation mRNA 26267365 26272428 . - . ID=GSCOCT00015483001;Parent=GSCOCG00015483001;Name=Cc01_g07980 | |
| 9970 chr1 manual_curation polypeptide 26267365 26272176 . - . ID=GSCOCP00015483001;Dbxref=GENE3D:G3DSA:1.25.40.10,InterPro:IPR001179,InterPro:IPR001440,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR019734,PANTHER:PTHR10516,PFAM:PF00515,PROFILE:PS50005,PROFILE:PS50293,SMART:SM00028,SwissProt:A4K2V0,SwissProt:B7ZWR6,SwissProt:Q15785,TAIR:AT3G21640.1,TAIR:AT4G30480.2,TAIR:AT5G21990.1,TrEMBL:B9HQJ3,TrEMBL:B9MYM0,TrEMBL:B9RQ36;Derives_from=GSCOCT00015483001;Name=Cc01_g07980;Ontology_term=CC_evidence_code:ISS,GO:0005488,GO:0006457,CC_EC_number:missing_EC_number,PRODUCT:Outer envelope protein 61%2C chloroplastic,CC_functional_completeness:complete,CC_gene:OEP61,CC_gene:TOMM34;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015483001~ Outer envelope protein 61%2C chloroplastic~ OEP61~ complete;original_location=complement(join(651928..652023%2C650868..651098%2C650352..650408%2C650126..650254%2C649862..649939%2C649701..649771%2C649485..649534%2C649105..649303%2C647934..648468%2C647499..647642%2C647212..647358));owner=coffea | |
| 9971 chr1 manual_curation exon 26267365 26267511 . - . Parent=GSCOCT00015483001 | |
| 9972 chr1 manual_curation exon 26267652 26267795 . - . Parent=GSCOCT00015483001 | |
| 9973 chr1 manual_curation exon 26268087 26268621 . - . Parent=GSCOCT00015483001 | |
| 9974 chr1 manual_curation exon 26269258 26269456 . - . Parent=GSCOCT00015483001 | |
| 9975 chr1 manual_curation exon 26269638 26269687 . - . Parent=GSCOCT00015483001 | |
| 9976 chr1 manual_curation exon 26269854 26269924 . - . Parent=GSCOCT00015483001 | |
| 9977 chr1 manual_curation exon 26270015 26270092 . - . Parent=GSCOCT00015483001 | |
| 9978 chr1 manual_curation exon 26270279 26270407 . - . Parent=GSCOCT00015483001 | |
| 9979 chr1 manual_curation exon 26270505 26270561 . - . Parent=GSCOCT00015483001 | |
| 9980 chr1 manual_curation exon 26271021 26271251 . - . Parent=GSCOCT00015483001 | |
| 9981 chr1 manual_curation exon 26272081 26272428 . - . Parent=GSCOCT00015483001 | |
| 9982 chr1 manual_curation CDS 26267365 26267511 . - 0 Parent=GSCOCT00015483001 | |
| 9983 chr1 manual_curation CDS 26267652 26267795 . - 0 Parent=GSCOCT00015483001 | |
| 9984 chr1 manual_curation CDS 26268087 26268621 . - 2 Parent=GSCOCT00015483001 | |
| 9985 chr1 manual_curation CDS 26269258 26269456 . - 1 Parent=GSCOCT00015483001 | |
| 9986 chr1 manual_curation CDS 26269638 26269687 . - 2 Parent=GSCOCT00015483001 | |
| 9987 chr1 manual_curation CDS 26269854 26269924 . - 0 Parent=GSCOCT00015483001 | |
| 9988 chr1 manual_curation CDS 26270015 26270092 . - 0 Parent=GSCOCT00015483001 | |
| 9989 chr1 manual_curation CDS 26270279 26270407 . - 0 Parent=GSCOCT00015483001 | |
| 9990 chr1 manual_curation CDS 26270505 26270561 . - 0 Parent=GSCOCT00015483001 | |
| 9991 chr1 manual_curation CDS 26271021 26271251 . - 0 Parent=GSCOCT00015483001 | |
| 9992 chr1 manual_curation CDS 26272081 26272176 . - 0 Parent=GSCOCT00015483001 | |
| 9993 chr1 manual_curation gene 26284120 26287711 . + . ID=GSCOCG00015484001;Name=Cc01_g07990 | |
| 9994 chr1 manual_curation mRNA 26284120 26287711 . + . ID=GSCOCT00015484001;Parent=GSCOCG00015484001;Name=Cc01_g07990 | |
| 9995 chr1 manual_curation polypeptide 26284418 26287492 . + . ID=GSCOCP00015484001;Dbxref=GENE3D:G3DSA:3.30.70.240,InterPro:IPR000640,InterPro:IPR000795,InterPro:IPR004161,InterPro:IPR005225,InterPro:IPR009000,InterPro:IPR009022,InterPro:IPR020568,PFAM:PF00009,PFAM:PF00679,PFAM:PF03144,PRINTS:PR00315,SMART:SM00838,SUPERFAMILY:SSF50447,SUPERFAMILY:SSF54211,SUPERFAMILY:SSF54980,SwissProt:O74945,SwissProt:Q6FYA7,SwissProt:Q7Z2Z2,TAIR:AT1G56070.1,TAIR:AT3G12915.1,TAIR:AT3G22980.1,TIGRFAMs:TIGR00231,TrEMBL:B9RPP6,TrEMBL:D7L2H7,TrEMBL:F6I0B7;Derives_from=GSCOCT00015484001;Name=Cc01_g07990;Ontology_term=CC_evidence_code:ISS,GO:0003924,GO:0005525,CC_EC_number:missing_EC_number,PRODUCT:Putative Elongation factor Tu GTP-binding domain-containing protein 1,CC_functional_completeness:complete,CC_gene:EFTUD1,CC_gene:ria1,CC_gene:EFT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015484001~ Putative Elongation factor Tu GTP-binding domain-containing protein 1~ EFTUD1~ complete;original_location=664265..667339;owner=coffea | |
| 9996 chr1 manual_curation exon 26284120 26287711 . + . Parent=GSCOCT00015484001 | |
| 9997 chr1 manual_curation CDS 26284418 26287492 . + 0 Parent=GSCOCT00015484001 | |
| 9998 chr1 manual_curation gene 26291168 26302236 . - . ID=GSCOCG00015486001;Name=Cc01_g08000 | |
| 9999 chr1 manual_curation mRNA 26291168 26302236 . - . ID=GSCOCT00015486001;Parent=GSCOCG00015486001;Name=Cc01_g08000 | |
| 10000 chr1 manual_curation polypeptide 26291168 26302236 . - . ID=GSCOCP00015486001;Dbxref=GENE3D:G3DSA:3.40.850.10,InterPro:IPR001752,InterPro:IPR019821,PFAM:PF00225,PRINTS:PR00380,PROFILE:PS50067,PROSITE:PS00411,SMART:SM00129,SwissProt:Q7TSP2,SwissProt:Q9GYZ0,SwissProt:Q9NS87,TAIR:AT3G17360.1,TAIR:AT3G19050.1,TAIR:AT3G44050.1,TrEMBL:B9HQG1,TrEMBL:B9SS38,TrEMBL:G7IRI6;Derives_from=GSCOCT00015486001;Name=Cc01_g08000;Ontology_term=CC_evidence_code:ISS,GO:0003777,GO:0005524,GO:0007018,CC_EC_number:missing_EC_number,PRODUCT:P-loop containing nucleoside triphosphate hydrolases superfamily protein,CC_functional_completeness:complete,CC_gene:KIF15,CC_gene:Kif15;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015486001~ P-loop containing nucleoside triphosphate hydrolases superfamily protein~ KIF15~ complete;original_location=complement(join(681805..682083%2C680885..681040%2C680706..680789%2C680046..680165%2C679385..679498%2C679183..679275%2C678462..678551%2C678286..678356%2C678108..678182%2C677875..677962%2C677250..677308%2C676997..677060%2C676432..676497%2C675715..675873%2C675534..675638%2C675127..675372%2C674855..674905%2C674120..674176%2C673914..673992%2C673862..673869%2C673566..673625%2C673345..673424%2C672576..673151%2C671015..672176));owner=coffea | |
| 10001 chr1 manual_curation exon 26291168 26292329 . - . Parent=GSCOCT00015486001 | |
| 10002 chr1 manual_curation exon 26292729 26293304 . - . Parent=GSCOCT00015486001 | |
| 10003 chr1 manual_curation exon 26293498 26293577 . - . Parent=GSCOCT00015486001 | |
| 10004 chr1 manual_curation exon 26293719 26293778 . - . Parent=GSCOCT00015486001 | |
| 10005 chr1 manual_curation exon 26294015 26294022 . - . Parent=GSCOCT00015486001 | |
| 10006 chr1 manual_curation exon 26294067 26294145 . - . Parent=GSCOCT00015486001 | |
| 10007 chr1 manual_curation exon 26294273 26294329 . - . Parent=GSCOCT00015486001 | |
| 10008 chr1 manual_curation exon 26295008 26295058 . - . Parent=GSCOCT00015486001 | |
| 10009 chr1 manual_curation exon 26295280 26295525 . - . Parent=GSCOCT00015486001 | |
| 10010 chr1 manual_curation exon 26295687 26295791 . - . Parent=GSCOCT00015486001 | |
| 10011 chr1 manual_curation exon 26295868 26296026 . - . Parent=GSCOCT00015486001 | |
| 10012 chr1 manual_curation exon 26296585 26296650 . - . Parent=GSCOCT00015486001 | |
| 10013 chr1 manual_curation exon 26297150 26297213 . - . Parent=GSCOCT00015486001 | |
| 10014 chr1 manual_curation exon 26297403 26297461 . - . Parent=GSCOCT00015486001 | |
| 10015 chr1 manual_curation exon 26298028 26298115 . - . Parent=GSCOCT00015486001 | |
| 10016 chr1 manual_curation exon 26298261 26298335 . - . Parent=GSCOCT00015486001 | |
| 10017 chr1 manual_curation exon 26298439 26298509 . - . Parent=GSCOCT00015486001 | |
| 10018 chr1 manual_curation exon 26298615 26298704 . - . Parent=GSCOCT00015486001 | |
| 10019 chr1 manual_curation exon 26299336 26299428 . - . Parent=GSCOCT00015486001 | |
| 10020 chr1 manual_curation exon 26299538 26299651 . - . Parent=GSCOCT00015486001 | |
| 10021 chr1 manual_curation exon 26300199 26300318 . - . Parent=GSCOCT00015486001 | |
| 10022 chr1 manual_curation exon 26300859 26300942 . - . Parent=GSCOCT00015486001 | |
| 10023 chr1 manual_curation exon 26301038 26301193 . - . Parent=GSCOCT00015486001 | |
| 10024 chr1 manual_curation exon 26301958 26302236 . - . Parent=GSCOCT00015486001 | |
| 10025 chr1 manual_curation CDS 26291168 26292329 . - 2 Parent=GSCOCT00015486001 | |
| 10026 chr1 manual_curation CDS 26292729 26293304 . - 2 Parent=GSCOCT00015486001 | |
| 10027 chr1 manual_curation CDS 26293498 26293577 . - 0 Parent=GSCOCT00015486001 | |
| 10028 chr1 manual_curation CDS 26293719 26293778 . - 0 Parent=GSCOCT00015486001 | |
| 10029 chr1 manual_curation CDS 26294015 26294022 . - 1 Parent=GSCOCT00015486001 | |
| 10030 chr1 manual_curation CDS 26294067 26294145 . - 0 Parent=GSCOCT00015486001 | |
| 10031 chr1 manual_curation CDS 26294273 26294329 . - 0 Parent=GSCOCT00015486001 | |
| 10032 chr1 manual_curation CDS 26295008 26295058 . - 0 Parent=GSCOCT00015486001 | |
| 10033 chr1 manual_curation CDS 26295280 26295525 . - 0 Parent=GSCOCT00015486001 | |
| 10034 chr1 manual_curation CDS 26295687 26295791 . - 0 Parent=GSCOCT00015486001 | |
| 10035 chr1 manual_curation CDS 26295868 26296026 . - 0 Parent=GSCOCT00015486001 | |
| 10036 chr1 manual_curation CDS 26296585 26296650 . - 0 Parent=GSCOCT00015486001 | |
| 10037 chr1 manual_curation CDS 26297150 26297213 . - 2 Parent=GSCOCT00015486001 | |
| 10038 chr1 manual_curation CDS 26297403 26297461 . - 0 Parent=GSCOCT00015486001 | |
| 10039 chr1 manual_curation CDS 26298028 26298115 . - 2 Parent=GSCOCT00015486001 | |
| 10040 chr1 manual_curation CDS 26298261 26298335 . - 2 Parent=GSCOCT00015486001 | |
| 10041 chr1 manual_curation CDS 26298439 26298509 . - 0 Parent=GSCOCT00015486001 | |
| 10042 chr1 manual_curation CDS 26298615 26298704 . - 0 Parent=GSCOCT00015486001 | |
| 10043 chr1 manual_curation CDS 26299336 26299428 . - 0 Parent=GSCOCT00015486001 | |
| 10044 chr1 manual_curation CDS 26299538 26299651 . - 0 Parent=GSCOCT00015486001 | |
| 10045 chr1 manual_curation CDS 26300199 26300318 . - 0 Parent=GSCOCT00015486001 | |
| 10046 chr1 manual_curation CDS 26300859 26300942 . - 0 Parent=GSCOCT00015486001 | |
| 10047 chr1 manual_curation CDS 26301038 26301193 . - 0 Parent=GSCOCT00015486001 | |
| 10048 chr1 manual_curation CDS 26301958 26302236 . - 0 Parent=GSCOCT00015486001 | |
| 10049 chr1 manual_curation gene 26304559 26306622 . - . ID=GSCOCG00015487001;Name=Cc01_g08010 | |
| 10050 chr1 manual_curation mRNA 26304559 26306622 . - . ID=GSCOCT00015487001;Parent=GSCOCG00015487001;Name=Cc01_g08010 | |
| 10051 chr1 manual_curation polypeptide 26304729 26306320 . - . ID=GSCOCP00015487001;Dbxref=InterPro:IPR013094,PFAM:PF07859,SwissProt:Q9FG13,SwissProt:Q9LFR7,SwissProt:Q9SX25,TAIR:AT1G68620.1,TAIR:AT5G06570.1,TAIR:AT5G16080.1,TrEMBL:B9HQG3,TrEMBL:B9SNK0,TrEMBL:Q0ZPV4;Derives_from=GSCOCT00015487001;Name=Cc01_g08010;Ontology_term=CC_evidence_code:ISS,GO:0008152,GO:0016787,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable carboxylesterase 15,CC_functional_completeness:complete,CC_gene:CXE15,CC_gene:CXE17,CC_gene:CXE6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015487001~ Putative Probable carboxylesterase 15~ CXE15~ complete;original_location=complement(join(685461..686167%2C684576..684882));owner=coffea | |
| 10052 chr1 manual_curation exon 26304559 26305035 . - . Parent=GSCOCT00015487001 | |
| 10053 chr1 manual_curation exon 26305614 26306622 . - . Parent=GSCOCT00015487001 | |
| 10054 chr1 manual_curation CDS 26304729 26305035 . - 2 Parent=GSCOCT00015487001 | |
| 10055 chr1 manual_curation CDS 26305614 26306320 . - 0 Parent=GSCOCT00015487001 | |
| 10056 chr1 manual_curation gene 26308117 26311561 . - . ID=GSCOCG00015489001;Name=Cc01_g08020 | |
| 10057 chr1 manual_curation mRNA 26308117 26311561 . - . ID=GSCOCT00015489001;Parent=GSCOCG00015489001;Name=Cc01_g08020 | |
| 10058 chr1 manual_curation polypeptide 26308117 26311463 . - . ID=GSCOCP00015489001;Dbxref=TAIR:AT3G44020.1,TrEMBL:B9HQG4,TrEMBL:C6SWT9,TrEMBL:D7T1M2;Derives_from=GSCOCT00015489001;Name=Cc01_g08020;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:thylakoid lumenal P17.1 protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015489001~ thylakoid lumenal P17.1 protein~ unknown_gene~ modules;original_location=complement(join(690981..691310%2C690736..690772%2C688152..688235%2C687964..688016));owner=coffea | |
| 10059 chr1 manual_curation exon 26308117 26308169 . - . Parent=GSCOCT00015489001 | |
| 10060 chr1 manual_curation exon 26308305 26308388 . - . Parent=GSCOCT00015489001 | |
| 10061 chr1 manual_curation exon 26310889 26310925 . - . Parent=GSCOCT00015489001 | |
| 10062 chr1 manual_curation exon 26311134 26311561 . - . Parent=GSCOCT00015489001 | |
| 10063 chr1 manual_curation CDS 26308117 26308169 . - 1 Parent=GSCOCT00015489001 | |
| 10064 chr1 manual_curation CDS 26308305 26308388 . - 1 Parent=GSCOCT00015489001 | |
| 10065 chr1 manual_curation CDS 26310889 26310925 . - 0 Parent=GSCOCT00015489001 | |
| 10066 chr1 manual_curation CDS 26311134 26311463 . - 0 Parent=GSCOCT00015489001 | |
| 10067 chr1 manual_curation gene 26313429 26317148 . + . ID=GSCOCG00015490001;Name=Cc01_g08030 | |
| 10068 chr1 manual_curation mRNA 26313429 26317148 . + . ID=GSCOCT00015490001;Parent=GSCOCG00015490001;Name=Cc01_g08030 | |
| 10069 chr1 manual_curation polypeptide 26314203 26316436 . + . ID=GSCOCP00015490001;Dbxref=TAIR:AT5G43680.1,TrEMBL:B9GS76,TrEMBL:B9T097,TrEMBL:D7T787;Derives_from=GSCOCT00015490001;Name=Cc01_g08030;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B Has 30201 Blast hits to 17322 proteins in 780 species,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015490001~ Putative unknown protein%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(694050..694110%2C694405..694526%2C694660..694801%2C694912..694970%2C695054..695246%2C696174..696283);owner=coffea | |
| 10070 chr1 manual_curation exon 26313429 26313557 . + . Parent=GSCOCT00015490001 | |
| 10071 chr1 manual_curation exon 26316794 26317148 . + . Parent=GSCOCT00015490001 | |
| 10072 chr1 manual_curation exon 26314162 26314263 . + . Parent=GSCOCT00015490001 | |
| 10073 chr1 manual_curation exon 26314558 26314679 . + . Parent=GSCOCT00015490001 | |
| 10074 chr1 manual_curation exon 26314813 26314954 . + . Parent=GSCOCT00015490001 | |
| 10075 chr1 manual_curation exon 26315065 26315123 . + . Parent=GSCOCT00015490001 | |
| 10076 chr1 manual_curation exon 26315207 26315399 . + . Parent=GSCOCT00015490001 | |
| 10077 chr1 manual_curation exon 26316327 26316440 . + . Parent=GSCOCT00015490001 | |
| 10078 chr1 manual_curation CDS 26314203 26314263 . + 0 Parent=GSCOCT00015490001 | |
| 10079 chr1 manual_curation CDS 26314558 26314679 . + 1 Parent=GSCOCT00015490001 | |
| 10080 chr1 manual_curation CDS 26314813 26314954 . + 0 Parent=GSCOCT00015490001 | |
| 10081 chr1 manual_curation CDS 26315065 26315123 . + 1 Parent=GSCOCT00015490001 | |
| 10082 chr1 manual_curation CDS 26315207 26315399 . + 0 Parent=GSCOCT00015490001 | |
| 10083 chr1 manual_curation CDS 26316327 26316436 . + 1 Parent=GSCOCT00015490001 | |
| 10084 chr1 manual_curation gene 26319322 26322088 . + . ID=GSCOCG00015491001;Name=Cc01_g08040 | |
| 10085 chr1 manual_curation mRNA 26319322 26322088 . + . ID=GSCOCT00015491001;Parent=GSCOCG00015491001;Name=Cc01_g08040 | |
| 10086 chr1 manual_curation polypeptide 26320512 26322088 . + . ID=GSCOCP00015491001;Dbxref=TrEMBL:A4UV41,TrEMBL:Q60CZ7,TrEMBL:Q6L4J5;Derives_from=GSCOCT00015491001;Name=Cc01_g08040;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015491001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(700359..701237%2C701388..701655%2C701742..701935);owner=coffea | |
| 10087 chr1 manual_curation exon 26319322 26321390 . + . Parent=GSCOCT00015491001 | |
| 10088 chr1 manual_curation exon 26321541 26321808 . + . Parent=GSCOCT00015491001 | |
| 10089 chr1 manual_curation exon 26321895 26322088 . + . Parent=GSCOCT00015491001 | |
| 10090 chr1 manual_curation CDS 26320512 26321390 . + 0 Parent=GSCOCT00015491001 | |
| 10091 chr1 manual_curation CDS 26321541 26321808 . + 0 Parent=GSCOCT00015491001 | |
| 10092 chr1 manual_curation CDS 26321895 26322088 . + 1 Parent=GSCOCT00015491001 | |
| 10093 chr1 manual_curation gene 26322822 26325546 . + . ID=GSCOCG00015492001;Name=Cc01_g08050 | |
| 10094 chr1 manual_curation mRNA 26322822 26325546 . + . ID=GSCOCT00015492001;Parent=GSCOCG00015492001;Name=Cc01_g08050 | |
| 10095 chr1 manual_curation polypeptide 26322822 26325364 . + . ID=GSCOCP00015492001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q60CZ8,SwissProt:Q6L3Z7,SwissProt:Q6L438,TAIR:AT1G53350.1,TAIR:AT1G58602.1,TAIR:AT5G43470.1,TrEMBL:Q6L432,TrEMBL:Q96485,TrEMBL:Q9LLD0;Derives_from=GSCOCT00015492001;Name=Cc01_g08050;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1A-6,CC_functional_completeness:fragment,CC_gene:R1A-6,CC_gene:R1A-10,CC_gene:R1B-14;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015492001~ Putative late blight resistance protein homolog R1A-6~ R1A-6~ fragment;original_location=join(702669..702759%2C702882..704771%2C704814..705211);owner=coffea | |
| 10096 chr1 manual_curation exon 26322822 26322912 . + . Parent=GSCOCT00015492001 | |
| 10097 chr1 manual_curation exon 26323035 26324924 . + . Parent=GSCOCT00015492001 | |
| 10098 chr1 manual_curation exon 26324967 26325546 . + . Parent=GSCOCT00015492001 | |
| 10099 chr1 manual_curation CDS 26322822 26322912 . + 0 Parent=GSCOCT00015492001 | |
| 10100 chr1 manual_curation CDS 26323035 26324924 . + 1 Parent=GSCOCT00015492001 | |
| 10101 chr1 manual_curation CDS 26324967 26325364 . + 1 Parent=GSCOCT00015492001 | |
| 10102 chr1 manual_curation gene 26327270 26329009 . + . ID=GSCOCG00015493001;Name=Cc01_g08060 | |
| 10103 chr1 manual_curation mRNA 26327270 26329009 . + . ID=GSCOCT00015493001;Parent=GSCOCG00015493001;Name=Cc01_g08060 | |
| 10104 chr1 manual_curation polypeptide 26327403 26328616 . + . ID=GSCOCP00015493001;Derives_from=GSCOCT00015493001;Name=Cc01_g08060;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015493001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(707250..707310%2C707559..707569%2C707682..707692%2C707895..708008%2C708430..708463);owner=coffea | |
| 10105 chr1 manual_curation exon 26327270 26327463 . + . Parent=GSCOCT00015493001 | |
| 10106 chr1 manual_curation exon 26327712 26327722 . + . Parent=GSCOCT00015493001 | |
| 10107 chr1 manual_curation exon 26327835 26327845 . + . Parent=GSCOCT00015493001 | |
| 10108 chr1 manual_curation exon 26328048 26328161 . + . Parent=GSCOCT00015493001 | |
| 10109 chr1 manual_curation exon 26328583 26329009 . + . Parent=GSCOCT00015493001 | |
| 10110 chr1 manual_curation CDS 26327403 26327463 . + 0 Parent=GSCOCT00015493001 | |
| 10111 chr1 manual_curation CDS 26327712 26327722 . + 1 Parent=GSCOCT00015493001 | |
| 10112 chr1 manual_curation CDS 26327835 26327845 . + 0 Parent=GSCOCT00015493001 | |
| 10113 chr1 manual_curation CDS 26328048 26328161 . + 2 Parent=GSCOCT00015493001 | |
| 10114 chr1 manual_curation CDS 26328583 26328616 . + 2 Parent=GSCOCT00015493001 | |
| 10115 chr1 manual_curation gene 26338550 26343685 . + . ID=GSCOCG00015494001;Name=Cc01_g08070 | |
| 10116 chr1 manual_curation mRNA 26338550 26343685 . + . ID=GSCOCT00015494001;Parent=GSCOCG00015494001;Name=Cc01_g08070 | |
| 10117 chr1 manual_curation polypeptide 26338550 26343685 . + . ID=GSCOCP00015494001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q6L3Z7,SwissProt:Q6L403,SwissProt:Q8W1E0,TAIR:AT1G59620.1,TAIR:AT1G59780.1,TAIR:AT3G46530.1,TrEMBL:Q6L432,TrEMBL:Q96485,TrEMBL:Q9LLD0;Derives_from=GSCOCT00015494001;Name=Cc01_g08070;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative Disease resistance protein (CC-NBS-LRR class) family,CC_functional_completeness:modules,CC_gene:R1B-14,CC_gene:R1B-17,CC_gene:R1A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015494001~ Putative Disease resistance protein (CC-NBS-LRR class) family~ R1B-14~ modules;original_location=718397..723532;owner=coffea | |
| 10118 chr1 manual_curation exon 26338550 26343685 . + . Parent=GSCOCT00015494001 | |
| 10119 chr1 manual_curation CDS 26338550 26343685 . + 0 Parent=GSCOCT00015494001 | |
| 10120 chr1 manual_curation gene 26357160 26358108 . - . ID=GSCOCG00015497001;Name=Cc01_g08080 | |
| 10121 chr1 manual_curation mRNA 26357160 26358108 . - . ID=GSCOCT00015497001;Parent=GSCOCG00015497001;Name=Cc01_g08080 | |
| 10122 chr1 manual_curation polypeptide 26357550 26357886 . - . ID=GSCOCP00015497001;Derives_from=GSCOCT00015497001;Name=Cc01_g08080;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015497001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(737712..737733%2C737397..737629));owner=coffea | |
| 10123 chr1 manual_curation exon 26357160 26357782 . - . Parent=GSCOCT00015497001 | |
| 10124 chr1 manual_curation exon 26357865 26358108 . - . Parent=GSCOCT00015497001 | |
| 10125 chr1 manual_curation CDS 26357550 26357782 . - 1 Parent=GSCOCT00015497001 | |
| 10126 chr1 manual_curation CDS 26357865 26357886 . - 0 Parent=GSCOCT00015497001 | |
| 10127 chr1 manual_curation gene 26358308 26360282 . - . ID=GSCOCG00015498001;Name=Cc01_g08090 | |
| 10128 chr1 manual_curation mRNA 26358308 26360282 . - . ID=GSCOCT00015498001;Parent=GSCOCG00015498001;Name=Cc01_g08090 | |
| 10129 chr1 manual_curation polypeptide 26358308 26360128 . - . ID=GSCOCP00015498001;Dbxref=InterPro:IPR013955,InterPro:IPR016027,PFAM:PF08646,SUPERFAMILY:SSF50249;Derives_from=GSCOCT00015498001;Name=Cc01_g08090;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015498001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(739881..739975%2C739659..739779%2C739349..739577%2C739142..739264%2C738155..738189));owner=coffea | |
| 10130 chr1 manual_curation exon 26358308 26358342 . - . Parent=GSCOCT00015498001 | |
| 10131 chr1 manual_curation exon 26359295 26359417 . - . Parent=GSCOCT00015498001 | |
| 10132 chr1 manual_curation exon 26359502 26359730 . - . Parent=GSCOCT00015498001 | |
| 10133 chr1 manual_curation exon 26359812 26359932 . - . Parent=GSCOCT00015498001 | |
| 10134 chr1 manual_curation exon 26360034 26360282 . - . Parent=GSCOCT00015498001 | |
| 10135 chr1 manual_curation CDS 26358308 26358342 . - 1 Parent=GSCOCT00015498001 | |
| 10136 chr1 manual_curation CDS 26359295 26359417 . - 1 Parent=GSCOCT00015498001 | |
| 10137 chr1 manual_curation CDS 26359502 26359730 . - 0 Parent=GSCOCT00015498001 | |
| 10138 chr1 manual_curation CDS 26359812 26359932 . - 2 Parent=GSCOCT00015498001 | |
| 10139 chr1 manual_curation CDS 26360034 26360128 . - 0 Parent=GSCOCT00015498001 | |
| 10140 chr1 manual_curation gene 26360440 26362162 . - . ID=GSCOCG00015499001;Name=Cc01_g08100 | |
| 10141 chr1 manual_curation mRNA 26360440 26362162 . - . ID=GSCOCT00015499001;Parent=GSCOCG00015499001;Name=Cc01_g08100 | |
| 10142 chr1 manual_curation polypeptide 26360473 26362162 . - . ID=GSCOCP00015499001;Dbxref=GENE3D:G3DSA:2.40.50.140,InterPro:IPR010285,InterPro:IPR012340,InterPro:IPR016027,PFAM:PF05970,SUPERFAMILY:SSF50249,SwissProt:P27694,SwissProt:Q5R7Q4,TAIR:AT3G51690.1,TAIR:AT3G51700.1,TAIR:AT5G28780.1,TrEMBL:Q851V4,TrEMBL:Q8LML8,TrEMBL:Q8LMY0;Derives_from=GSCOCT00015499001;Name=Cc01_g08100;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative DNA helicase PIF1%2C ATP-dependent,CC_functional_completeness:complete,CC_gene:RPA1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015499001~ Putative DNA helicase PIF1%2C ATP-dependent~ RPA1~ complete;original_location=complement(join(741574..742009%2C741287..741432%2C740917..741187%2C740741..740837%2C740514..740638%2C740320..740417));owner=coffea | |
| 10143 chr1 manual_curation exon 26360440 26360570 . - . Parent=GSCOCT00015499001 | |
| 10144 chr1 manual_curation exon 26360667 26360791 . - . Parent=GSCOCT00015499001 | |
| 10145 chr1 manual_curation exon 26360894 26360990 . - . Parent=GSCOCT00015499001 | |
| 10146 chr1 manual_curation exon 26361070 26361340 . - . Parent=GSCOCT00015499001 | |
| 10147 chr1 manual_curation exon 26361440 26361585 . - . Parent=GSCOCT00015499001 | |
| 10148 chr1 manual_curation exon 26361727 26362162 . - . Parent=GSCOCT00015499001 | |
| 10149 chr1 manual_curation CDS 26360473 26360570 . - 1 Parent=GSCOCT00015499001 | |
| 10150 chr1 manual_curation CDS 26360667 26360791 . - 2 Parent=GSCOCT00015499001 | |
| 10151 chr1 manual_curation CDS 26360894 26360990 . - 1 Parent=GSCOCT00015499001 | |
| 10152 chr1 manual_curation CDS 26361070 26361340 . - 0 Parent=GSCOCT00015499001 | |
| 10153 chr1 manual_curation CDS 26361440 26361585 . - 1 Parent=GSCOCT00015499001 | |
| 10154 chr1 manual_curation CDS 26361727 26362162 . - 0 Parent=GSCOCT00015499001 | |
| 10155 chr1 manual_curation gene 26415667 26453362 . + . ID=GSCOCG00015500001;Name=Cc01_g08110 | |
| 10156 chr1 manual_curation mRNA 26415667 26453362 . + . ID=GSCOCT00015500001;Parent=GSCOCG00015500001;Name=Cc01_g08110 | |
| 10157 chr1 manual_curation polypeptide 26415667 26453108 . + . ID=GSCOCP00015500001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q6L3Z7,SwissProt:Q6L403,SwissProt:Q6L438,TAIR:AT1G58602.1,TAIR:AT1G59620.1,TAIR:AT1G59780.1,TrEMBL:Q96485,TrEMBL:Q9LLD0,TrEMBL:Q9LLD4;Derives_from=GSCOCT00015500001;Name=Cc01_g08110;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1B-14,CC_functional_completeness:complete,CC_gene:R1B-14,CC_gene:R1B-17,CC_gene:R1A-6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015500001~ Putative late blight resistance protein homolog R1B-14~ R1B-14~ complete;original_location=join(795514..795681%2C795898..796204%2C798957..800879%2C800931..801175%2C827856..830574%2C830671..832955);owner=coffea | |
| 10158 chr1 manual_curation exon 26415667 26415834 . + . Parent=GSCOCT00015500001 | |
| 10159 chr1 manual_curation exon 26416051 26416357 . + . Parent=GSCOCT00015500001 | |
| 10160 chr1 manual_curation exon 26419110 26421032 . + . Parent=GSCOCT00015500001 | |
| 10161 chr1 manual_curation exon 26421084 26421328 . + . Parent=GSCOCT00015500001 | |
| 10162 chr1 manual_curation exon 26448009 26450727 . + . Parent=GSCOCT00015500001 | |
| 10163 chr1 manual_curation exon 26450824 26453362 . + . Parent=GSCOCT00015500001 | |
| 10164 chr1 manual_curation CDS 26415667 26415834 . + 0 Parent=GSCOCT00015500001 | |
| 10165 chr1 manual_curation CDS 26416051 26416357 . + 0 Parent=GSCOCT00015500001 | |
| 10166 chr1 manual_curation CDS 26419110 26421032 . + 1 Parent=GSCOCT00015500001 | |
| 10167 chr1 manual_curation CDS 26421084 26421328 . + 1 Parent=GSCOCT00015500001 | |
| 10168 chr1 manual_curation CDS 26448009 26450727 . + 0 Parent=GSCOCT00015500001 | |
| 10169 chr1 manual_curation CDS 26450824 26453108 . + 1 Parent=GSCOCT00015500001 | |
| 10170 chr1 manual_curation gene 26510950 26513689 . + . ID=GSCOCG00015503001;Name=Cc01_g08120 | |
| 10171 chr1 manual_curation mRNA 26510950 26513689 . + . ID=GSCOCT00015503001;Parent=GSCOCG00015503001;Name=Cc01_g08120 | |
| 10172 chr1 manual_curation polypeptide 26510950 26513493 . + . ID=GSCOCP00015503001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q6L3Z7,SwissProt:Q6L403,SwissProt:Q6L438,TAIR:AT1G59620.1,TAIR:AT1G59780.1,TAIR:AT3G46530.1,TrEMBL:Q96485,TrEMBL:Q9LLD0,TrEMBL:Q9LLD4;Derives_from=GSCOCT00015503001;Name=Cc01_g08120;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1B-14,CC_functional_completeness:fragment,CC_gene:R1B-14,CC_gene:R1B-17,CC_gene:R1A-6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015503001~ Putative late blight resistance protein homolog R1B-14~ R1B-14~ fragment;original_location=join(890797..890989%2C891080..893340);owner=coffea | |
| 10173 chr1 manual_curation exon 26510950 26511142 . + . Parent=GSCOCT00015503001 | |
| 10174 chr1 manual_curation exon 26511233 26513689 . + . Parent=GSCOCT00015503001 | |
| 10175 chr1 manual_curation CDS 26510950 26511142 . + 0 Parent=GSCOCT00015503001 | |
| 10176 chr1 manual_curation CDS 26511233 26513493 . + 1 Parent=GSCOCT00015503001 | |
| 10177 chr1 manual_curation gene 26514643 26518839 . - . ID=GSCOCG00015504001;Name=Cc01_g08130 | |
| 10178 chr1 manual_curation mRNA 26514643 26518839 . - . ID=GSCOCT00015504001;Parent=GSCOCG00015504001;Name=Cc01_g08130 | |
| 10179 chr1 manual_curation polypeptide 26515114 26518839 . - . ID=GSCOCP00015504001;Dbxref=InterPro:IPR005833,InterPro:IPR005834,InterPro:IPR006439,InterPro:IPR011949,PFAM:PF00702,PRINTS:PR00413,SwissProt:Q5E9D6,SwissProt:Q5HZL9,SwissProt:Q9CYW4,TAIR:AT1G14310.1,TAIR:AT2G41250.1,TIGRFAMs:TIGR01549,TIGRFAMs:TIGR02252,TrEMBL:D7KBI9,TrEMBL:D7TNA0,TrEMBL:Q9M9T1;Derives_from=GSCOCT00015504001;Name=Cc01_g08130;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,GO:0008967,GO:0016787,CC_EC_number:missing_EC_number,CC_EC_number:missing_EC_number,PRODUCT:Putative Haloacid dehalogenase-like hydrolase domain-containing protein 3,CC_functional_completeness:modules,CC_gene:Hdhd3,CC_gene:HDHD3,CC_gene:hdhd3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015504001~ Putative Haloacid dehalogenase-like hydrolase domain-containing protein 3~ Hdhd3~ modules;original_location=complement(join(898575..898686%2C898206..898322%2C897920..898002%2C896411..896494%2C896209..896284%2C896047..896119%2C895618..895691%2C895249..895342%2C894961..895027));owner=coffea | |
| 10180 chr1 manual_curation exon 26514643 26515180 . - . Parent=GSCOCT00015504001 | |
| 10181 chr1 manual_curation exon 26515402 26515495 . - . Parent=GSCOCT00015504001 | |
| 10182 chr1 manual_curation exon 26515771 26515844 . - . Parent=GSCOCT00015504001 | |
| 10183 chr1 manual_curation exon 26516200 26516272 . - . Parent=GSCOCT00015504001 | |
| 10184 chr1 manual_curation exon 26516362 26516437 . - . Parent=GSCOCT00015504001 | |
| 10185 chr1 manual_curation exon 26516564 26516647 . - . Parent=GSCOCT00015504001 | |
| 10186 chr1 manual_curation exon 26518073 26518155 . - . Parent=GSCOCT00015504001 | |
| 10187 chr1 manual_curation exon 26518359 26518475 . - . Parent=GSCOCT00015504001 | |
| 10188 chr1 manual_curation exon 26518728 26518839 . - . Parent=GSCOCT00015504001 | |
| 10189 chr1 manual_curation CDS 26515114 26515180 . - 2 Parent=GSCOCT00015504001 | |
| 10190 chr1 manual_curation CDS 26515402 26515495 . - 1 Parent=GSCOCT00015504001 | |
| 10191 chr1 manual_curation CDS 26515771 26515844 . - 2 Parent=GSCOCT00015504001 | |
| 10192 chr1 manual_curation CDS 26516200 26516272 . - 1 Parent=GSCOCT00015504001 | |
| 10193 chr1 manual_curation CDS 26516362 26516437 . - 0 Parent=GSCOCT00015504001 | |
| 10194 chr1 manual_curation CDS 26516564 26516647 . - 0 Parent=GSCOCT00015504001 | |
| 10195 chr1 manual_curation CDS 26518073 26518155 . - 1 Parent=GSCOCT00015504001 | |
| 10196 chr1 manual_curation CDS 26518359 26518475 . - 1 Parent=GSCOCT00015504001 | |
| 10197 chr1 manual_curation CDS 26518728 26518839 . - 0 Parent=GSCOCT00015504001 | |
| 10198 chr1 manual_curation gene 26519736 26524766 . - . ID=GSCOCG00015505001;Name=Cc01_g08140 | |
| 10199 chr1 manual_curation mRNA 26519736 26524766 . - . ID=GSCOCT00015505001;Parent=GSCOCG00015505001;Name=Cc01_g08140 | |
| 10200 chr1 manual_curation polypeptide 26520535 26524044 . - . ID=GSCOCP00015505001;Dbxref=InterPro:IPR006852,PFAM:PF04765,TAIR:AT1G34550.1,TAIR:AT2G02910.1,TAIR:AT4G09630.1,TrEMBL:A4UV57,TrEMBL:D7TN99,TrEMBL:Q6L3T0;Derives_from=GSCOCT00015505001;Name=Cc01_g08140;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF616),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015505001~ Protein of unknown function (DUF616)~ unknown_gene~ complete;original_location=complement(join(903681..903891%2C903175..903306%2C902099..902457%2C901658..901869%2C901309..901565%2C901021..901199%2C900382..900432));owner=coffea | |
| 10201 chr1 manual_curation exon 26519736 26520105 . - . Parent=GSCOCT00015505001 | |
| 10202 chr1 manual_curation exon 26520170 26520318 . - . Parent=GSCOCT00015505001 | |
| 10203 chr1 manual_curation exon 26524256 26524304 . - . Parent=GSCOCT00015505001 | |
| 10204 chr1 manual_curation exon 26524616 26524766 . - . Parent=GSCOCT00015505001 | |
| 10205 chr1 manual_curation exon 26520514 26520585 . - . Parent=GSCOCT00015505001 | |
| 10206 chr1 manual_curation exon 26521174 26521352 . - . Parent=GSCOCT00015505001 | |
| 10207 chr1 manual_curation exon 26521462 26521718 . - . Parent=GSCOCT00015505001 | |
| 10208 chr1 manual_curation exon 26521811 26522022 . - . Parent=GSCOCT00015505001 | |
| 10209 chr1 manual_curation exon 26522252 26522610 . - . Parent=GSCOCT00015505001 | |
| 10210 chr1 manual_curation exon 26523328 26523459 . - . Parent=GSCOCT00015505001 | |
| 10211 chr1 manual_curation exon 26523834 26524085 . - . Parent=GSCOCT00015505001 | |
| 10212 chr1 manual_curation CDS 26520535 26520585 . - 0 Parent=GSCOCT00015505001 | |
| 10213 chr1 manual_curation CDS 26521174 26521352 . - 1 Parent=GSCOCT00015505001 | |
| 10214 chr1 manual_curation CDS 26521462 26521718 . - 2 Parent=GSCOCT00015505001 | |
| 10215 chr1 manual_curation CDS 26521811 26522022 . - 0 Parent=GSCOCT00015505001 | |
| 10216 chr1 manual_curation CDS 26522252 26522610 . - 1 Parent=GSCOCT00015505001 | |
| 10217 chr1 manual_curation CDS 26523328 26523459 . - 1 Parent=GSCOCT00015505001 | |
| 10218 chr1 manual_curation CDS 26523834 26524044 . - 0 Parent=GSCOCT00015505001 | |
| 10219 chr1 manual_curation gene 26541213 26547633 . + . ID=GSCOCG00015507001;Name=Cc01_g08150 | |
| 10220 chr1 manual_curation mRNA 26541213 26547633 . + . ID=GSCOCT00015507001;Parent=GSCOCG00015507001;Name=Cc01_g08150 | |
| 10221 chr1 manual_curation polypeptide 26541399 26547032 . + . ID=GSCOCP00015507001;Dbxref=GENE3D:G3DSA:4.10.60.10,InterPro:IPR001878,InterPro:IPR013084,PFAM:PF00098,PROFILE:PS50158,SMART:SM00343,SwissProt:P62634,SwissProt:Q04832,SwissProt:Q5R5R5,TAIR:AT3G43490.1,TAIR:AT3G43590.1,TAIR:AT5G36240.1,TrEMBL:F6HA74,TrEMBL:I1NE34,TrEMBL:I1NE37;Derives_from=GSCOCT00015507001;Name=Cc01_g08150;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative DNA-binding protein HEXBP,CC_functional_completeness:modules,CC_gene:HEXBP,CC_gene:Cnbp,CC_gene:CNBP;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015507001~ Putative DNA-binding protein HEXBP~ HEXBP~ modules;original_location=join(921246..921566%2C921738..921791%2C922234..922353%2C922439..922597%2C923999..924160%2C924342..924458%2C926103..926210%2C926433..926879);owner=coffea | |
| 10222 chr1 manual_curation exon 26541213 26541719 . + . Parent=GSCOCT00015507001 | |
| 10223 chr1 manual_curation exon 26541891 26541944 . + . Parent=GSCOCT00015507001 | |
| 10224 chr1 manual_curation exon 26542387 26542506 . + . Parent=GSCOCT00015507001 | |
| 10225 chr1 manual_curation exon 26542592 26542750 . + . Parent=GSCOCT00015507001 | |
| 10226 chr1 manual_curation exon 26544152 26544313 . + . Parent=GSCOCT00015507001 | |
| 10227 chr1 manual_curation exon 26544495 26544611 . + . Parent=GSCOCT00015507001 | |
| 10228 chr1 manual_curation exon 26546256 26546363 . + . Parent=GSCOCT00015507001 | |
| 10229 chr1 manual_curation exon 26546586 26547633 . + . Parent=GSCOCT00015507001 | |
| 10230 chr1 manual_curation CDS 26541399 26541719 . + 0 Parent=GSCOCT00015507001 | |
| 10231 chr1 manual_curation CDS 26541891 26541944 . + 0 Parent=GSCOCT00015507001 | |
| 10232 chr1 manual_curation CDS 26542387 26542506 . + 0 Parent=GSCOCT00015507001 | |
| 10233 chr1 manual_curation CDS 26542592 26542750 . + 0 Parent=GSCOCT00015507001 | |
| 10234 chr1 manual_curation CDS 26544152 26544313 . + 0 Parent=GSCOCT00015507001 | |
| 10235 chr1 manual_curation CDS 26544495 26544611 . + 0 Parent=GSCOCT00015507001 | |
| 10236 chr1 manual_curation CDS 26546256 26546363 . + 0 Parent=GSCOCT00015507001 | |
| 10237 chr1 manual_curation CDS 26546586 26547032 . + 0 Parent=GSCOCT00015507001 | |
| 10238 chr1 manual_curation gene 26549733 26563701 . + . ID=GSCOCG00015508001;Name=Cc01_g08160 | |
| 10239 chr1 manual_curation mRNA 26549733 26563701 . + . ID=GSCOCT00015508001;Parent=GSCOCG00015508001;Name=Cc01_g08160 | |
| 10240 chr1 manual_curation polypeptide 26550145 26563341 . + . ID=GSCOCP00015508001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:O55047,SwissProt:Q08CW1,SwissProt:Q39238,TAIR:AT2G45490.1,TAIR:AT3G13530.1,TAIR:AT5G20930.1,TrEMBL:B2YHW0,TrEMBL:B9HQG6,TrEMBL:D7T1L4;Derives_from=GSCOCT00015508001;Name=Cc01_g08160;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.1,PRODUCT:Serine/threonine-protein kinase TOUSLED,CC_functional_completeness:complete,CC_gene:TOUSLED,CC_gene:Tlk2,CC_gene:tlk2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015508001~ Serine/threonine-protein kinase TOUSLED~ TOUSLED~ complete;original_location=join(929992..930225%2C933991..934080%2C934293..934493%2C935665..935715%2C935902..935988%2C936088..936132%2C937203..937315%2C938455..938521%2C939339..939405%2C940043..940140%2C940217..940396%2C940562..940772%2C940929..941193%2C941493..941547%2C941781..941963%2C943078..943188);owner=coffea | |
| 10241 chr1 manual_curation exon 26549733 26550378 . + . Parent=GSCOCT00015508001 | |
| 10242 chr1 manual_curation exon 26554144 26554233 . + . Parent=GSCOCT00015508001 | |
| 10243 chr1 manual_curation exon 26554446 26554646 . + . Parent=GSCOCT00015508001 | |
| 10244 chr1 manual_curation exon 26555818 26555868 . + . Parent=GSCOCT00015508001 | |
| 10245 chr1 manual_curation exon 26556055 26556141 . + . Parent=GSCOCT00015508001 | |
| 10246 chr1 manual_curation exon 26556241 26556285 . + . Parent=GSCOCT00015508001 | |
| 10247 chr1 manual_curation exon 26557356 26557468 . + . Parent=GSCOCT00015508001 | |
| 10248 chr1 manual_curation exon 26558608 26558674 . + . Parent=GSCOCT00015508001 | |
| 10249 chr1 manual_curation exon 26559492 26559558 . + . Parent=GSCOCT00015508001 | |
| 10250 chr1 manual_curation exon 26560196 26560293 . + . Parent=GSCOCT00015508001 | |
| 10251 chr1 manual_curation exon 26560370 26560549 . + . Parent=GSCOCT00015508001 | |
| 10252 chr1 manual_curation exon 26560715 26560925 . + . Parent=GSCOCT00015508001 | |
| 10253 chr1 manual_curation exon 26561082 26561346 . + . Parent=GSCOCT00015508001 | |
| 10254 chr1 manual_curation exon 26561646 26561700 . + . Parent=GSCOCT00015508001 | |
| 10255 chr1 manual_curation exon 26561934 26562116 . + . Parent=GSCOCT00015508001 | |
| 10256 chr1 manual_curation exon 26563231 26563701 . + . Parent=GSCOCT00015508001 | |
| 10257 chr1 manual_curation CDS 26550145 26550378 . + 0 Parent=GSCOCT00015508001 | |
| 10258 chr1 manual_curation CDS 26554144 26554233 . + 0 Parent=GSCOCT00015508001 | |
| 10259 chr1 manual_curation CDS 26554446 26554646 . + 0 Parent=GSCOCT00015508001 | |
| 10260 chr1 manual_curation CDS 26555818 26555868 . + 0 Parent=GSCOCT00015508001 | |
| 10261 chr1 manual_curation CDS 26556055 26556141 . + 0 Parent=GSCOCT00015508001 | |
| 10262 chr1 manual_curation CDS 26556241 26556285 . + 0 Parent=GSCOCT00015508001 | |
| 10263 chr1 manual_curation CDS 26557356 26557468 . + 0 Parent=GSCOCT00015508001 | |
| 10264 chr1 manual_curation CDS 26558608 26558674 . + 2 Parent=GSCOCT00015508001 | |
| 10265 chr1 manual_curation CDS 26559492 26559558 . + 0 Parent=GSCOCT00015508001 | |
| 10266 chr1 manual_curation CDS 26560196 26560293 . + 1 Parent=GSCOCT00015508001 | |
| 10267 chr1 manual_curation CDS 26560370 26560549 . + 0 Parent=GSCOCT00015508001 | |
| 10268 chr1 manual_curation CDS 26560715 26560925 . + 0 Parent=GSCOCT00015508001 | |
| 10269 chr1 manual_curation CDS 26561082 26561346 . + 1 Parent=GSCOCT00015508001 | |
| 10270 chr1 manual_curation CDS 26561646 26561700 . + 2 Parent=GSCOCT00015508001 | |
| 10271 chr1 manual_curation CDS 26561934 26562116 . + 0 Parent=GSCOCT00015508001 | |
| 10272 chr1 manual_curation CDS 26563231 26563341 . + 0 Parent=GSCOCT00015508001 | |
| 10273 chr1 manual_curation gene 26568354 26570309 . + . ID=GSCOCG00015509001;Name=Cc01_g08170 | |
| 10274 chr1 manual_curation mRNA 26568354 26570309 . + . ID=GSCOCT00015509001;Parent=GSCOCG00015509001;Name=Cc01_g08170 | |
| 10275 chr1 manual_curation polypeptide 26568466 26570034 . + . ID=GSCOCP00015509001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q9C9A2,SwissProt:Q9FZ19,SwissProt:Q9M2C8,TAIR:AT1G02420.1,TAIR:AT1G71060.1,TAIR:AT3G61360.1,TIGRFAMs:TIGR00756,TrEMBL:B9RN92,TrEMBL:F6HZC9,TrEMBL:I1JBD3;Derives_from=GSCOCT00015509001;Name=Cc01_g08170;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative pentatricopeptide repeat-containing protein At1g02420,CC_functional_completeness:complete,CC_gene:At1g02420,CC_gene:At1g71060,CC_gene:At3g61360;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015509001~ Putative pentatricopeptide repeat-containing protein At1g02420~ At1g02420~ complete;original_location=948313..949881;owner=coffea | |
| 10276 chr1 manual_curation exon 26568354 26570309 . + . Parent=GSCOCT00015509001 | |
| 10277 chr1 manual_curation CDS 26568466 26570034 . + 0 Parent=GSCOCT00015509001 | |
| 10278 chr1 manual_curation gene 26571670 26579963 . - . ID=GSCOCG00015510001;Name=Cc01_g08180 | |
| 10279 chr1 manual_curation mRNA 26571670 26579963 . - . ID=GSCOCT00015510001;Parent=GSCOCG00015510001;Name=Cc01_g08180 | |
| 10280 chr1 manual_curation polypeptide 26571702 26579963 . - . ID=GSCOCP00015510001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SMART:SM00369,SwissProt:C0LGQ5,SwissProt:Q9C9H7,SwissProt:Q9FIZ3,TAIR:AT2G33060.1,TAIR:AT3G05660.1,TAIR:AT3G28890.1,TrEMBL:B9NC46,TrEMBL:D7SWS3,TrEMBL:F6HRA3;Derives_from=GSCOCT00015510001;Name=Cc01_g08180;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:3.1.3.16,PRODUCT:Putative Receptor-like protein 12,CC_functional_completeness:complete,CC_gene:RLP12,CC_gene:GSO1,CC_gene:GSO2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015510001~ Putative Receptor-like protein 12~ RLP12~ complete;original_location=complement(join(959095..959810%2C958604..958778%2C957023..958462%2C954313..954583%2C952215..953946%2C952122..952158%2C951549..951611));owner=coffea | |
| 10281 chr1 manual_curation exon 26571670 26571764 . - . Parent=GSCOCT00015510001 | |
| 10282 chr1 manual_curation exon 26572275 26572311 . - . Parent=GSCOCT00015510001 | |
| 10283 chr1 manual_curation exon 26572368 26574099 . - . Parent=GSCOCT00015510001 | |
| 10284 chr1 manual_curation exon 26574466 26574736 . - . Parent=GSCOCT00015510001 | |
| 10285 chr1 manual_curation exon 26577176 26578615 . - . Parent=GSCOCT00015510001 | |
| 10286 chr1 manual_curation exon 26578757 26578931 . - . Parent=GSCOCT00015510001 | |
| 10287 chr1 manual_curation exon 26579248 26579963 . - . Parent=GSCOCT00015510001 | |
| 10288 chr1 manual_curation CDS 26571702 26571764 . - 0 Parent=GSCOCT00015510001 | |
| 10289 chr1 manual_curation CDS 26572275 26572311 . - 2 Parent=GSCOCT00015510001 | |
| 10290 chr1 manual_curation CDS 26572368 26574099 . - 1 Parent=GSCOCT00015510001 | |
| 10291 chr1 manual_curation CDS 26574466 26574736 . - 0 Parent=GSCOCT00015510001 | |
| 10292 chr1 manual_curation CDS 26577176 26578615 . - 0 Parent=GSCOCT00015510001 | |
| 10293 chr1 manual_curation CDS 26578757 26578931 . - 2 Parent=GSCOCT00015510001 | |
| 10294 chr1 manual_curation CDS 26579248 26579963 . - 0 Parent=GSCOCT00015510001 | |
| 10295 chr1 manual_curation gene 26583688 26584092 . + . ID=GSCOCG00015512001;Name=Cc01_g08190 | |
| 10296 chr1 manual_curation mRNA 26583688 26584092 . + . ID=GSCOCT00015512001;Parent=GSCOCG00015512001;Name=Cc01_g08190 | |
| 10297 chr1 manual_curation polypeptide 26583688 26584092 . + . ID=GSCOCP00015512001;Dbxref=InterPro:IPR012001,PFAM:PF02776,SwissProt:Q8CHM7,SwissProt:Q9LF46,SwissProt:Q9QXE0,TAIR:AT3G48560.1,TAIR:AT5G17380.1,TrEMBL:A5B1B8,TrEMBL:B9SPZ1,TrEMBL:F6HSN5;Derives_from=GSCOCT00015512001;Name=Cc01_g08190;Ontology_term=CC_evidence_code:ISS,GO:0030976,CC_EC_number:4.1.1.8,PRODUCT:2-hydroxyacyl-CoA lyase,CC_functional_completeness:fragment,CC_gene:HACL,CC_gene:Hacl1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015512001~ 2-hydroxyacyl-CoA lyase~ HACL~ fragment;original_location=963535..963939;owner=coffea | |
| 10298 chr1 manual_curation exon 26583688 26584092 . + . Parent=GSCOCT00015512001 | |
| 10299 chr1 manual_curation CDS 26583688 26584092 . + 0 Parent=GSCOCT00015512001 | |
| 10300 chr1 manual_curation gene 26591303 26599055 . - . ID=GSCOCG00015513001;Name=Cc01_g08200 | |
| 10301 chr1 manual_curation mRNA 26591303 26599055 . - . ID=GSCOCT00015513001;Parent=GSCOCG00015513001;Name=Cc01_g08200 | |
| 10302 chr1 manual_curation polypeptide 26591303 26599055 . - . ID=GSCOCP00015513001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017441,InterPro:IPR020635,PFAM:PF07714,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00107,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:C0LGD7,SwissProt:C0LGU1,SwissProt:Q9LT96,TAIR:AT1G79620.1,TAIR:AT5G49760.1,TAIR:AT5G49770.1,TrEMBL:F6HMQ5,TrEMBL:I1KWY6,TrEMBL:I1MML9;Derives_from=GSCOCT00015513001;Name=Cc01_g08200;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable leucine-rich repeat receptor-like protein kinase At5g49770,CC_functional_completeness:complete,CC_gene:At5g49770,CC_gene:At5g37450,CC_gene:At1g06840;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015513001~ Putative Probable leucine-rich repeat receptor-like protein kinase At5g49770~ At5g49770~ complete;original_location=complement(join(978818..978902%2C977617..977743%2C977426..977497%2C977254..977328%2C977068..977139%2C976798..976965%2C976641..976715%2C976470..976541%2C976278..976349%2C976108..976176%2C975941..976015%2C975779..975850%2C975530..975670%2C974960..975432%2C974726..974884%2C974511..974650%2C974214..974433%2C971737..971972%2C971150..971596));owner=coffea | |
| 10303 chr1 manual_curation exon 26591303 26591749 . - . Parent=GSCOCT00015513001 | |
| 10304 chr1 manual_curation exon 26591890 26592125 . - . Parent=GSCOCT00015513001 | |
| 10305 chr1 manual_curation exon 26594367 26594586 . - . Parent=GSCOCT00015513001 | |
| 10306 chr1 manual_curation exon 26594664 26594803 . - . Parent=GSCOCT00015513001 | |
| 10307 chr1 manual_curation exon 26594879 26595037 . - . Parent=GSCOCT00015513001 | |
| 10308 chr1 manual_curation exon 26595113 26595585 . - . Parent=GSCOCT00015513001 | |
| 10309 chr1 manual_curation exon 26595683 26595823 . - . Parent=GSCOCT00015513001 | |
| 10310 chr1 manual_curation exon 26595932 26596003 . - . Parent=GSCOCT00015513001 | |
| 10311 chr1 manual_curation exon 26596094 26596168 . - . Parent=GSCOCT00015513001 | |
| 10312 chr1 manual_curation exon 26596261 26596329 . - . Parent=GSCOCT00015513001 | |
| 10313 chr1 manual_curation exon 26596431 26596502 . - . Parent=GSCOCT00015513001 | |
| 10314 chr1 manual_curation exon 26596623 26596694 . - . Parent=GSCOCT00015513001 | |
| 10315 chr1 manual_curation exon 26596794 26596868 . - . Parent=GSCOCT00015513001 | |
| 10316 chr1 manual_curation exon 26596951 26597118 . - . Parent=GSCOCT00015513001 | |
| 10317 chr1 manual_curation exon 26597221 26597292 . - . Parent=GSCOCT00015513001 | |
| 10318 chr1 manual_curation exon 26597407 26597481 . - . Parent=GSCOCT00015513001 | |
| 10319 chr1 manual_curation exon 26597579 26597650 . - . Parent=GSCOCT00015513001 | |
| 10320 chr1 manual_curation exon 26597770 26597896 . - . Parent=GSCOCT00015513001 | |
| 10321 chr1 manual_curation exon 26598971 26599055 . - . Parent=GSCOCT00015513001 | |
| 10322 chr1 manual_curation CDS 26591303 26591749 . - 0 Parent=GSCOCT00015513001 | |
| 10323 chr1 manual_curation CDS 26591890 26592125 . - 1 Parent=GSCOCT00015513001 | |
| 10324 chr1 manual_curation CDS 26594367 26594586 . - 0 Parent=GSCOCT00015513001 | |
| 10325 chr1 manual_curation CDS 26594664 26594803 . - 1 Parent=GSCOCT00015513001 | |
| 10326 chr1 manual_curation CDS 26594879 26595037 . - 1 Parent=GSCOCT00015513001 | |
| 10327 chr1 manual_curation CDS 26595113 26595585 . - 2 Parent=GSCOCT00015513001 | |
| 10328 chr1 manual_curation CDS 26595683 26595823 . - 2 Parent=GSCOCT00015513001 | |
| 10329 chr1 manual_curation CDS 26595932 26596003 . - 2 Parent=GSCOCT00015513001 | |
| 10330 chr1 manual_curation CDS 26596094 26596168 . - 2 Parent=GSCOCT00015513001 | |
| 10331 chr1 manual_curation CDS 26596261 26596329 . - 2 Parent=GSCOCT00015513001 | |
| 10332 chr1 manual_curation CDS 26596431 26596502 . - 2 Parent=GSCOCT00015513001 | |
| 10333 chr1 manual_curation CDS 26596623 26596694 . - 2 Parent=GSCOCT00015513001 | |
| 10334 chr1 manual_curation CDS 26596794 26596868 . - 2 Parent=GSCOCT00015513001 | |
| 10335 chr1 manual_curation CDS 26596951 26597118 . - 2 Parent=GSCOCT00015513001 | |
| 10336 chr1 manual_curation CDS 26597221 26597292 . - 2 Parent=GSCOCT00015513001 | |
| 10337 chr1 manual_curation CDS 26597407 26597481 . - 2 Parent=GSCOCT00015513001 | |
| 10338 chr1 manual_curation CDS 26597579 26597650 . - 2 Parent=GSCOCT00015513001 | |
| 10339 chr1 manual_curation CDS 26597770 26597896 . - 1 Parent=GSCOCT00015513001 | |
| 10340 chr1 manual_curation CDS 26598971 26599055 . - 0 Parent=GSCOCT00015513001 | |
| 10341 chr1 manual_curation gene 26613400 26615086 . - . ID=GSCOCG00015514001;Name=Cc01_g08210 | |
| 10342 chr1 manual_curation mRNA 26613400 26615086 . - . ID=GSCOCT00015514001;Parent=GSCOCG00015514001;Name=Cc01_g08210 | |
| 10343 chr1 manual_curation polypeptide 26613529 26614884 . - . ID=GSCOCP00015514001;Dbxref=InterPro:IPR000823,InterPro:IPR002016,InterPro:IPR010255,InterPro:IPR019793,PFAM:PF00141,PRINTS:PR00458,PRINTS:PR00461,PROFILE:PS50873,PROSITE:PS00435,SUPERFAMILY:SSF48113,SwissProt:O23044,SwissProt:Q43872,SwissProt:Q9LT91,TAIR:AT1G05260.1,TAIR:AT5G42180.1,TAIR:AT5G51890.1,TrEMBL:B9GQQ9,TrEMBL:E0CQY1,TrEMBL:I1MC15;Derives_from=GSCOCT00015514001;Name=Cc01_g08210;Ontology_term=CC_evidence_code:ISS,GO:0004601,GO:0006979,GO:0020037,GO:0055114,CC_EC_number:1.11.1.7,PRODUCT:Peroxidase 64,CC_functional_completeness:complete,CC_gene:PER64,CC_gene:PER66,CC_gene:PER3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015514001~ Peroxidase 64~ PER64~ complete;original_location=complement(join(994666..994731%2C994367..994555%2C993995..994157%2C993376..993773));owner=coffea | |
| 10344 chr1 manual_curation exon 26613400 26613926 . - . Parent=GSCOCT00015514001 | |
| 10345 chr1 manual_curation exon 26614148 26614310 . - . Parent=GSCOCT00015514001 | |
| 10346 chr1 manual_curation exon 26614520 26614708 . - . Parent=GSCOCT00015514001 | |
| 10347 chr1 manual_curation exon 26614819 26615086 . - . Parent=GSCOCT00015514001 | |
| 10348 chr1 manual_curation CDS 26613529 26613926 . - 1 Parent=GSCOCT00015514001 | |
| 10349 chr1 manual_curation CDS 26614148 26614310 . - 0 Parent=GSCOCT00015514001 | |
| 10350 chr1 manual_curation CDS 26614520 26614708 . - 0 Parent=GSCOCT00015514001 | |
| 10351 chr1 manual_curation CDS 26614819 26614884 . - 0 Parent=GSCOCT00015514001 | |
| 10352 chr1 manual_curation gene 26618029 26618896 . - . ID=GSCOCG00015515001;Name=Cc01_g08220 | |
| 10353 chr1 manual_curation mRNA 26618029 26618896 . - . ID=GSCOCT00015515001;Parent=GSCOCG00015515001;Name=Cc01_g08220 | |
| 10354 chr1 manual_curation polypeptide 26618029 26618896 . - . ID=GSCOCP00015515001;Dbxref=InterPro:IPR001611,PFAM:PF00560,SwissProt:Q8GUQ5,SwissProt:Q8L899,SwissProt:Q9C9H7,TAIR:AT3G05660.1,TAIR:AT3G11010.1,TAIR:AT5G40170.1,TrEMBL:F6GW00,TrEMBL:F6HRA3,TrEMBL:F6I414;Derives_from=GSCOCT00015515001;Name=Cc01_g08220;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative receptor like protein 33,CC_functional_completeness:fragment,CC_gene:RLP12,CC_gene:CURL3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015515001~ Putative receptor like protein 33~ RLP12~ fragment;original_location=complement(join(998087..998743%2C997876..997977));owner=coffea | |
| 10355 chr1 manual_curation exon 26618029 26618130 . - . Parent=GSCOCT00015515001 | |
| 10356 chr1 manual_curation exon 26618240 26618896 . - . Parent=GSCOCT00015515001 | |
| 10357 chr1 manual_curation CDS 26618029 26618130 . - 0 Parent=GSCOCT00015515001 | |
| 10358 chr1 manual_curation CDS 26618240 26618896 . - 0 Parent=GSCOCT00015515001 | |
| 10359 chr1 manual_curation gene 26624186 26627031 . - . ID=GSCOCG00015518001;Name=Cc01_g08230 | |
| 10360 chr1 manual_curation mRNA 26624186 26627031 . - . ID=GSCOCT00015518001;Parent=GSCOCG00015518001;Name=Cc01_g08230 | |
| 10361 chr1 manual_curation polypeptide 26624186 26627031 . - . ID=GSCOCP00015518001;Dbxref=InterPro:IPR001173,PFAM:PF00535,SwissProt:Q67VS7,SwissProt:Q9LQC9,SwissProt:Q9LZR3,TAIR:AT1G23480.1,TAIR:AT5G03760.1,TAIR:AT5G22740.1,TrEMBL:A5C8E8,TrEMBL:D7UBV9,TrEMBL:I1NHP1;Derives_from=GSCOCT00015518001;Name=Cc01_g08230;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.4.1.12,PRODUCT:Glucomannan 4-beta-mannosyltransferase 9,CC_functional_completeness:complete,CC_gene:CSLA9,CC_gene:CSLA3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015518001~ Glucomannan 4-beta-mannosyltransferase 9~ CSLA9~ complete;original_location=complement(join(1006801..1006878%2C1006580..1006678%2C1006426..1006490%2C1006224..1006263%2C1006111..1006131%2C1005755..1006007%2C1005527..1005637%2C1005296..1005432%2C1005032..1005145%2C1004744..1004940%2C1004460..1004654%2C1004033..1004198));owner=coffea | |
| 10362 chr1 manual_curation exon 26624186 26624351 . - . Parent=GSCOCT00015518001 | |
| 10363 chr1 manual_curation exon 26624613 26624807 . - . Parent=GSCOCT00015518001 | |
| 10364 chr1 manual_curation exon 26624897 26625093 . - . Parent=GSCOCT00015518001 | |
| 10365 chr1 manual_curation exon 26625185 26625298 . - . Parent=GSCOCT00015518001 | |
| 10366 chr1 manual_curation exon 26625449 26625585 . - . Parent=GSCOCT00015518001 | |
| 10367 chr1 manual_curation exon 26625680 26625790 . - . Parent=GSCOCT00015518001 | |
| 10368 chr1 manual_curation exon 26625908 26626160 . - . Parent=GSCOCT00015518001 | |
| 10369 chr1 manual_curation exon 26626264 26626284 . - . Parent=GSCOCT00015518001 | |
| 10370 chr1 manual_curation exon 26626377 26626416 . - . Parent=GSCOCT00015518001 | |
| 10371 chr1 manual_curation exon 26626579 26626643 . - . Parent=GSCOCT00015518001 | |
| 10372 chr1 manual_curation exon 26626733 26626831 . - . Parent=GSCOCT00015518001 | |
| 10373 chr1 manual_curation exon 26626954 26627031 . - . Parent=GSCOCT00015518001 | |
| 10374 chr1 manual_curation CDS 26624186 26624351 . - 2 Parent=GSCOCT00015518001 | |
| 10375 chr1 manual_curation CDS 26624613 26624807 . - 2 Parent=GSCOCT00015518001 | |
| 10376 chr1 manual_curation CDS 26624897 26625093 . - 0 Parent=GSCOCT00015518001 | |
| 10377 chr1 manual_curation CDS 26625185 26625298 . - 0 Parent=GSCOCT00015518001 | |
| 10378 chr1 manual_curation CDS 26625449 26625585 . - 1 Parent=GSCOCT00015518001 | |
| 10379 chr1 manual_curation CDS 26625680 26625790 . - 1 Parent=GSCOCT00015518001 | |
| 10380 chr1 manual_curation CDS 26625908 26626160 . - 0 Parent=GSCOCT00015518001 | |
| 10381 chr1 manual_curation CDS 26626264 26626284 . - 0 Parent=GSCOCT00015518001 | |
| 10382 chr1 manual_curation CDS 26626377 26626416 . - 2 Parent=GSCOCT00015518001 | |
| 10383 chr1 manual_curation CDS 26626579 26626643 . - 0 Parent=GSCOCT00015518001 | |
| 10384 chr1 manual_curation CDS 26626733 26626831 . - 0 Parent=GSCOCT00015518001 | |
| 10385 chr1 manual_curation CDS 26626954 26627031 . - 0 Parent=GSCOCT00015518001 | |
| 10386 chr1 manual_curation gene 26654083 26654358 . + . ID=GSCOCG00015522001;Name=Cc01_g08240 | |
| 10387 chr1 manual_curation mRNA 26654083 26654358 . + . ID=GSCOCT00015522001;Parent=GSCOCG00015522001;Name=Cc01_g08240 | |
| 10388 chr1 manual_curation polypeptide 26654083 26654358 . + . ID=GSCOCP00015522001;Dbxref=SwissProt:Q8LPL2,SwissProt:Q9LYD5,SwissProt:Q9M817,TAIR:AT1G52190.1,TAIR:AT3G16180.1,TAIR:AT5G11570.1,TrEMBL:B9IKK4,TrEMBL:B9RS25,TrEMBL:B9RS27;Derives_from=GSCOCT00015522001;Name=Cc01_g08240;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Probable peptide transporter At1g52190,CC_functional_completeness:fragment,CC_gene:At1g52190,CC_gene:At3g16180,CC_gene:At5g11570;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015522001~ Probable peptide transporter At1g52190~ At1g52190~ fragment;original_location=1033930..1034205;owner=coffea | |
| 10389 chr1 manual_curation exon 26654083 26654358 . + . Parent=GSCOCT00015522001 | |
| 10390 chr1 manual_curation CDS 26654083 26654358 . + 0 Parent=GSCOCT00015522001 | |
| 10391 chr1 manual_curation gene 26671367 26673856 . - . ID=GSCOCG00015525001;Name=Cc01_g08250 | |
| 10392 chr1 manual_curation mRNA 26671367 26673856 . - . ID=GSCOCT00015525001;Parent=GSCOCG00015525001;Name=Cc01_g08250 | |
| 10393 chr1 manual_curation polypeptide 26671367 26673856 . - . ID=GSCOCP00015525001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SMART:SM00369,SwissProt:O82318,SwissProt:Q9C9H7,SwissProt:Q9FL28,TAIR:AT1G47890.1,TAIR:AT3G05650.1,TAIR:AT3G05660.1,TrEMBL:B0BLA5,TrEMBL:I1M7B0,TrEMBL:I1M7B1;Derives_from=GSCOCT00015525001;Name=Cc01_g08250;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:3.1.3.16,PRODUCT:Putative Receptor-like protein 12,CC_functional_completeness:complete,CC_gene:RLP12,CC_gene:At2g25790,CC_gene:FLS2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015525001~ Putative Receptor-like protein 12~ RLP12~ complete;original_location=complement(join(1053237..1053703%2C1052772..1053155%2C1051214..1052696));owner=coffea | |
| 10394 chr1 manual_curation exon 26671367 26672849 . - . Parent=GSCOCT00015525001 | |
| 10395 chr1 manual_curation exon 26672925 26673308 . - . Parent=GSCOCT00015525001 | |
| 10396 chr1 manual_curation exon 26673390 26673856 . - . Parent=GSCOCT00015525001 | |
| 10397 chr1 manual_curation CDS 26671367 26672849 . - 2 Parent=GSCOCT00015525001 | |
| 10398 chr1 manual_curation CDS 26672925 26673308 . - 2 Parent=GSCOCT00015525001 | |
| 10399 chr1 manual_curation CDS 26673390 26673856 . - 0 Parent=GSCOCT00015525001 | |
| 10400 chr1 manual_curation gene 26691565 26692664 . - . ID=GSCOCG00015526001;Name=Cc01_g08260 | |
| 10401 chr1 manual_curation mRNA 26691565 26692664 . - . ID=GSCOCT00015526001;Parent=GSCOCG00015526001;Name=Cc01_g08260 | |
| 10402 chr1 manual_curation polypeptide 26691565 26692664 . - . ID=GSCOCP00015526001;Dbxref=InterPro:IPR001611,PFAM:PF00560,SwissProt:Q8GUQ5,SwissProt:Q8L899,SwissProt:Q9C9H7,TAIR:AT2G33060.1,TAIR:AT3G05660.1,TAIR:AT3G11010.1,TrEMBL:A5CBK0,TrEMBL:F6GW00,TrEMBL:F6I414;Derives_from=GSCOCT00015526001;Name=Cc01_g08260;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative Receptor-like protein 12,CC_functional_completeness:complete,CC_gene:RLP12,CC_gene:CURL3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015526001~ Putative Receptor-like protein 12~ RLP12~ complete;original_location=complement(join(1072247..1072511%2C1071412..1072109));owner=coffea | |
| 10403 chr1 manual_curation exon 26691565 26692262 . - . Parent=GSCOCT00015526001 | |
| 10404 chr1 manual_curation exon 26692400 26692664 . - . Parent=GSCOCT00015526001 | |
| 10405 chr1 manual_curation CDS 26691565 26692262 . - 1 Parent=GSCOCT00015526001 | |
| 10406 chr1 manual_curation CDS 26692400 26692664 . - 0 Parent=GSCOCT00015526001 | |
| 10407 chr1 manual_curation gene 26703276 26706204 . + . ID=GSCOCG00015527001;Name=Cc01_g08270 | |
| 10408 chr1 manual_curation mRNA 26703276 26706204 . + . ID=GSCOCT00015527001;Parent=GSCOCG00015527001;Name=Cc01_g08270 | |
| 10409 chr1 manual_curation polypeptide 26703375 26705967 . + . ID=GSCOCP00015527001;Dbxref=InterPro:IPR002085,InterPro:IPR002328,InterPro:IPR011032,InterPro:IPR013149,InterPro:IPR013154,PANTHER:PTHR11695,PFAM:PF00107,PFAM:PF08240,PROSITE:PS00059,SUPERFAMILY:SSF50129,SwissProt:Q9FH04,SwissProt:Q9SK86,SwissProt:Q9SK87,TAIR:AT1G22430.1,TAIR:AT1G22440.1,TAIR:AT5G42250.1,TrEMBL:B9R8J1,TrEMBL:F6H0C5,TrEMBL:Q41241;Derives_from=GSCOCT00015527001;Name=Cc01_g08270;Ontology_term=CC_evidence_code:ISS,GO:0008270,GO:0016491,GO:0055114,CC_EC_number:1.1.1.284,PRODUCT:Alcohol dehydrogenase-like 7,CC_functional_completeness:complete,CC_gene:At5g42250,CC_gene:At1g22440,CC_gene:At1g22430;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015527001~ Alcohol dehydrogenase-like 7~ At5g42250~ complete;original_location=join(1083222..1083276%2C1083712..1083848%2C1083942..1083988%2C1084088..1084410%2C1084576..1084658%2C1084766..1084841%2C1084959..1085023%2C1085161..1085259%2C1085361..1085525%2C1085659..1085814);owner=coffea | |
| 10410 chr1 manual_curation exon 26703276 26703429 . + . Parent=GSCOCT00015527001 | |
| 10411 chr1 manual_curation exon 26703865 26704001 . + . Parent=GSCOCT00015527001 | |
| 10412 chr1 manual_curation exon 26704095 26704141 . + . Parent=GSCOCT00015527001 | |
| 10413 chr1 manual_curation exon 26704241 26704563 . + . Parent=GSCOCT00015527001 | |
| 10414 chr1 manual_curation exon 26704729 26704811 . + . Parent=GSCOCT00015527001 | |
| 10415 chr1 manual_curation exon 26704919 26704994 . + . Parent=GSCOCT00015527001 | |
| 10416 chr1 manual_curation exon 26705112 26705176 . + . Parent=GSCOCT00015527001 | |
| 10417 chr1 manual_curation exon 26705314 26705412 . + . Parent=GSCOCT00015527001 | |
| 10418 chr1 manual_curation exon 26705514 26705678 . + . Parent=GSCOCT00015527001 | |
| 10419 chr1 manual_curation exon 26705812 26706204 . + . Parent=GSCOCT00015527001 | |
| 10420 chr1 manual_curation CDS 26703375 26703429 . + 0 Parent=GSCOCT00015527001 | |
| 10421 chr1 manual_curation CDS 26703865 26704001 . + 1 Parent=GSCOCT00015527001 | |
| 10422 chr1 manual_curation CDS 26704095 26704141 . + 0 Parent=GSCOCT00015527001 | |
| 10423 chr1 manual_curation CDS 26704241 26704563 . + 2 Parent=GSCOCT00015527001 | |
| 10424 chr1 manual_curation CDS 26704729 26704811 . + 1 Parent=GSCOCT00015527001 | |
| 10425 chr1 manual_curation CDS 26704919 26704994 . + 0 Parent=GSCOCT00015527001 | |
| 10426 chr1 manual_curation CDS 26705112 26705176 . + 1 Parent=GSCOCT00015527001 | |
| 10427 chr1 manual_curation CDS 26705314 26705412 . + 0 Parent=GSCOCT00015527001 | |
| 10428 chr1 manual_curation CDS 26705514 26705678 . + 0 Parent=GSCOCT00015527001 | |
| 10429 chr1 manual_curation CDS 26705812 26705967 . + 0 Parent=GSCOCT00015527001 | |
| 10430 chr1 manual_curation gene 26745570 26748362 . - . ID=GSCOCG00015531001;Name=Cc01_g08280 | |
| 10431 chr1 manual_curation mRNA 26745570 26748362 . - . ID=GSCOCT00015531001;Parent=GSCOCG00015531001;Name=Cc01_g08280 | |
| 10432 chr1 manual_curation polypeptide 26745570 26748362 . - . ID=GSCOCP00015531001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SMART:SM00369,SwissProt:C0LGQ5,SwissProt:Q9C9H7,SwissProt:Q9LP24,TAIR:AT1G45616.1,TAIR:AT1G47890.1,TAIR:AT3G05660.1,TrEMBL:G7KBS0,TrEMBL:G7KHF1,TrEMBL:I1MP88;Derives_from=GSCOCT00015531001;Name=Cc01_g08280;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:3.1.3.16,PRODUCT:Putative Receptor-like protein 12,CC_functional_completeness:complete,CC_gene:RLP12,CC_gene:GSO1,CC_gene:At1g35710;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015531001~ Putative Receptor-like protein 12~ RLP12~ complete;original_location=complement(1125417..1128209);owner=coffea | |
| 10433 chr1 manual_curation exon 26745570 26748362 . - . Parent=GSCOCT00015531001 | |
| 10434 chr1 manual_curation CDS 26745570 26748362 . - 0 Parent=GSCOCT00015531001 | |
| 10435 chr1 manual_curation gene 26756563 26758416 . - . ID=GSCOCG00015532001;Name=Cc01_g08290 | |
| 10436 chr1 manual_curation mRNA 26756563 26758416 . - . ID=GSCOCT00015532001;Parent=GSCOCG00015532001;Name=Cc01_g08290 | |
| 10437 chr1 manual_curation polypeptide 26756563 26758416 . - . ID=GSCOCP00015532001;Dbxref=InterPro:IPR001611,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SwissProt:C0LGT6,SwissProt:Q9C9H7,SwissProt:Q9M2Z1,TAIR:AT1G45616.1,TAIR:AT3G05360.1,TAIR:AT3G28890.1,TrEMBL:Q4VSU5,TrEMBL:Q5MPX7,TrEMBL:Q9ZS81;Derives_from=GSCOCT00015532001;Name=Cc01_g08290;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:3.1.3.16,PRODUCT:Putative Receptor-like protein 12,CC_functional_completeness:complete,CC_gene:RLP12,CC_gene:EFR,CC_gene:BAM2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015532001~ Putative Receptor-like protein 12~ RLP12~ complete;original_location=complement(join(1137384..1138263%2C1136695..1136911%2C1136410..1136656));owner=coffea | |
| 10438 chr1 manual_curation exon 26756563 26756809 . - . Parent=GSCOCT00015532001 | |
| 10439 chr1 manual_curation exon 26756848 26757064 . - . Parent=GSCOCT00015532001 | |
| 10440 chr1 manual_curation exon 26757537 26758416 . - . Parent=GSCOCT00015532001 | |
| 10441 chr1 manual_curation CDS 26756563 26756809 . - 2 Parent=GSCOCT00015532001 | |
| 10442 chr1 manual_curation CDS 26756848 26757064 . - 1 Parent=GSCOCT00015532001 | |
| 10443 chr1 manual_curation CDS 26757537 26758416 . - 0 Parent=GSCOCT00015532001 | |
| 10444 chr1 manual_curation gene 26760101 26763023 . + . ID=GSCOCG00015533001;Name=Cc01_g08300 | |
| 10445 chr1 manual_curation mRNA 26760101 26763023 . + . ID=GSCOCT00015533001;Parent=GSCOCG00015533001;Name=Cc01_g08300 | |
| 10446 chr1 manual_curation polypeptide 26760240 26762812 . + . ID=GSCOCP00015533001;Dbxref=InterPro:IPR002085,InterPro:IPR002328,InterPro:IPR011032,InterPro:IPR013149,InterPro:IPR013154,PANTHER:PTHR11695,PFAM:PF00107,PFAM:PF08240,PROSITE:PS00059,SUPERFAMILY:SSF50129,SwissProt:Q9FH04,SwissProt:Q9SK86,SwissProt:Q9SK87,TAIR:AT1G22430.1,TAIR:AT1G22440.1,TAIR:AT5G42250.1,TrEMBL:B9R8J1,TrEMBL:F6H0C5,TrEMBL:Q41241;Derives_from=GSCOCT00015533001;Name=Cc01_g08300;Ontology_term=CC_evidence_code:ISS,GO:0008270,GO:0016491,GO:0055114,CC_EC_number:1.1.1.284,PRODUCT:Alcohol dehydrogenase-like 7,CC_functional_completeness:complete,CC_gene:At5g42250,CC_gene:At1g22440,CC_gene:At1g22430;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015533001~ Alcohol dehydrogenase-like 7~ At5g42250~ complete;original_location=join(1140087..1140141%2C1140554..1140690%2C1140784..1140830%2C1140932..1141254%2C1141421..1141503%2C1141610..1141685%2C1141803..1141867%2C1142005..1142103%2C1142205..1142369%2C1142504..1142659);owner=coffea | |
| 10447 chr1 manual_curation exon 26760101 26760294 . + . Parent=GSCOCT00015533001 | |
| 10448 chr1 manual_curation exon 26760707 26760843 . + . Parent=GSCOCT00015533001 | |
| 10449 chr1 manual_curation exon 26760937 26760983 . + . Parent=GSCOCT00015533001 | |
| 10450 chr1 manual_curation exon 26761085 26761407 . + . Parent=GSCOCT00015533001 | |
| 10451 chr1 manual_curation exon 26761574 26761656 . + . Parent=GSCOCT00015533001 | |
| 10452 chr1 manual_curation exon 26761763 26761838 . + . Parent=GSCOCT00015533001 | |
| 10453 chr1 manual_curation exon 26761956 26762020 . + . Parent=GSCOCT00015533001 | |
| 10454 chr1 manual_curation exon 26762158 26762256 . + . Parent=GSCOCT00015533001 | |
| 10455 chr1 manual_curation exon 26762358 26762522 . + . Parent=GSCOCT00015533001 | |
| 10456 chr1 manual_curation exon 26762657 26763023 . + . Parent=GSCOCT00015533001 | |
| 10457 chr1 manual_curation CDS 26760240 26760294 . + 0 Parent=GSCOCT00015533001 | |
| 10458 chr1 manual_curation CDS 26760707 26760843 . + 1 Parent=GSCOCT00015533001 | |
| 10459 chr1 manual_curation CDS 26760937 26760983 . + 0 Parent=GSCOCT00015533001 | |
| 10460 chr1 manual_curation CDS 26761085 26761407 . + 2 Parent=GSCOCT00015533001 | |
| 10461 chr1 manual_curation CDS 26761574 26761656 . + 1 Parent=GSCOCT00015533001 | |
| 10462 chr1 manual_curation CDS 26761763 26761838 . + 0 Parent=GSCOCT00015533001 | |
| 10463 chr1 manual_curation CDS 26761956 26762020 . + 1 Parent=GSCOCT00015533001 | |
| 10464 chr1 manual_curation CDS 26762158 26762256 . + 0 Parent=GSCOCT00015533001 | |
| 10465 chr1 manual_curation CDS 26762358 26762522 . + 0 Parent=GSCOCT00015533001 | |
| 10466 chr1 manual_curation CDS 26762657 26762812 . + 0 Parent=GSCOCT00015533001 | |
| 10467 chr1 manual_curation gene 26835224 26838775 . - . ID=GSCOCG00015534001;Name=Cc01_g08310 | |
| 10468 chr1 manual_curation mRNA 26835224 26838775 . - . ID=GSCOCT00015534001;Parent=GSCOCG00015534001;Name=Cc01_g08310 | |
| 10469 chr1 manual_curation polypeptide 26835224 26838775 . - . ID=GSCOCP00015534001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SMART:SM00369,SwissProt:C0LGT6,SwissProt:O82318,SwissProt:Q9C9H7,TAIR:AT1G71390.1,TAIR:AT3G05360.1,TAIR:AT3G28890.1,TrEMBL:A5CBK0,TrEMBL:D7SWS3,TrEMBL:F6HRA3;Derives_from=GSCOCT00015534001;Name=Cc01_g08310;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative Receptor-like protein 12,CC_functional_completeness:complete,CC_gene:RLP12,CC_gene:At2g25790,CC_gene:EFR;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015534001~ Putative Receptor-like protein 12~ RLP12~ complete;original_location=complement(join(1218105..1218622%2C1216551..1217613%2C1216219..1216487%2C1216159..1216165%2C1215071..1215244));owner=coffea | |
| 10470 chr1 manual_curation exon 26835224 26835397 . - . Parent=GSCOCT00015534001 | |
| 10471 chr1 manual_curation exon 26836312 26836318 . - . Parent=GSCOCT00015534001 | |
| 10472 chr1 manual_curation exon 26836372 26836640 . - . Parent=GSCOCT00015534001 | |
| 10473 chr1 manual_curation exon 26836704 26837766 . - . Parent=GSCOCT00015534001 | |
| 10474 chr1 manual_curation exon 26838258 26838775 . - . Parent=GSCOCT00015534001 | |
| 10475 chr1 manual_curation CDS 26835224 26835397 . - 0 Parent=GSCOCT00015534001 | |
| 10476 chr1 manual_curation CDS 26836312 26836318 . - 2 Parent=GSCOCT00015534001 | |
| 10477 chr1 manual_curation CDS 26836372 26836640 . - 0 Parent=GSCOCT00015534001 | |
| 10478 chr1 manual_curation CDS 26836704 26837766 . - 2 Parent=GSCOCT00015534001 | |
| 10479 chr1 manual_curation CDS 26838258 26838775 . - 0 Parent=GSCOCT00015534001 | |
| 10480 chr1 manual_curation gene 26855751 26856678 . - . ID=GSCOCG00015535001;Name=Cc01_g08320 | |
| 10481 chr1 manual_curation mRNA 26855751 26856678 . - . ID=GSCOCT00015535001;Parent=GSCOCG00015535001;Name=Cc01_g08320 | |
| 10482 chr1 manual_curation polypeptide 26856226 26856678 . - . ID=GSCOCP00015535001;Dbxref=InterPro:IPR001611,PFAM:PF00560,SwissProt:Q9C9H7,TAIR:AT2G33030.1,TAIR:AT3G24982.1,TAIR:AT3G25020.1,TrEMBL:G7KBR9,TrEMBL:G7KBS0,TrEMBL:G7KEK2;Derives_from=GSCOCT00015535001;Name=Cc01_g08320;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative receptor like protein 42,CC_functional_completeness:fragment,CC_gene:RLP12;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015535001~ Putative receptor like protein 42~ RLP12~ fragment;original_location=complement(1236073..1236525);owner=coffea | |
| 10483 chr1 manual_curation exon 26855751 26856678 . - . Parent=GSCOCT00015535001 | |
| 10484 chr1 manual_curation CDS 26856226 26856678 . - 0 Parent=GSCOCT00015535001 | |
| 10485 chr1 manual_curation gene 26866178 26869475 . - . ID=GSCOCG00015536001;Name=Cc01_g08330 | |
| 10486 chr1 manual_curation mRNA 26866178 26869475 . - . ID=GSCOCT00015536001;Parent=GSCOCG00015536001;Name=Cc01_g08330 | |
| 10487 chr1 manual_curation polypeptide 26866665 26869475 . - . ID=GSCOCP00015536001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SMART:SM00369,SwissProt:C0LGT6,SwissProt:Q9C9H7,SwissProt:Q9M2Z1,TAIR:AT1G71390.1,TAIR:AT1G71400.1,TAIR:AT3G28890.1,TrEMBL:A5CBK0,TrEMBL:D7SWS3,TrEMBL:F6HRA3;Derives_from=GSCOCT00015536001;Name=Cc01_g08330;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:3.1.3.16,PRODUCT:Putative Receptor-like protein 12,CC_functional_completeness:complete,CC_gene:RLP12,CC_gene:EFR,CC_gene:BAM2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015536001~ Putative Receptor-like protein 12~ RLP12~ complete;original_location=complement(join(1248847..1249322%2C1248061..1248447%2C1247231..1247850%2C1246512..1247116));owner=coffea | |
| 10488 chr1 manual_curation exon 26866178 26867269 . - . Parent=GSCOCT00015536001 | |
| 10489 chr1 manual_curation exon 26867384 26868003 . - . Parent=GSCOCT00015536001 | |
| 10490 chr1 manual_curation exon 26868214 26868600 . - . Parent=GSCOCT00015536001 | |
| 10491 chr1 manual_curation exon 26869000 26869475 . - . Parent=GSCOCT00015536001 | |
| 10492 chr1 manual_curation CDS 26866665 26867269 . - 1 Parent=GSCOCT00015536001 | |
| 10493 chr1 manual_curation CDS 26867384 26868003 . - 2 Parent=GSCOCT00015536001 | |
| 10494 chr1 manual_curation CDS 26868214 26868600 . - 2 Parent=GSCOCT00015536001 | |
| 10495 chr1 manual_curation CDS 26869000 26869475 . - 0 Parent=GSCOCT00015536001 | |
| 10496 chr1 manual_curation gene 26889001 26898730 . + . ID=GSCOCG00015538001;Name=Cc01_g08340 | |
| 10497 chr1 manual_curation mRNA 26889001 26898730 . + . ID=GSCOCT00015538001;Parent=GSCOCG00015538001;Name=Cc01_g08340 | |
| 10498 chr1 manual_curation polypeptide 26889389 26898730 . + . ID=GSCOCP00015538001;Dbxref=InterPro:IPR003395,InterPro:IPR010935,PFAM:PF02463,PFAM:PF06470,SUPERFAMILY:SSF75553,SwissProt:O93309,SwissProt:P97690,SwissProt:Q9CW03,TAIR:AT2G27170.1,TAIR:AT3G47460.1,TAIR:AT5G62410.1,TrEMBL:B9HQG8,TrEMBL:B9SUJ2,TrEMBL:F6H9I4;Derives_from=GSCOCT00015538001;Name=Cc01_g08340;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0005524,GO:0005694,GO:0051276,CC_EC_number:missing_EC_number,PRODUCT:Putative Structural maintenance of chromosomes protein 3,CC_functional_completeness:fragment,CC_gene:smc3,CC_gene:Smc3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015538001~ Putative Structural maintenance of chromosomes protein 3~ smc3~ fragment;original_location=join(1269236..1269250%2C1269341..1269416%2C1269505..1269543%2C1269662..1269729%2C1269847..1269918%2C1270967..1271046%2C1271187..1271265%2C1271369..1271462%2C1271559..1271734%2C1272401..1272646%2C1272731..1272852%2C1273276..1273420%2C1274390..1274562%2C1274645..1274744%2C1275316..1275452%2C1275568..1275769%2C1278243..1278330%2C1278414..1278577);owner=coffea | |
| 10499 chr1 manual_curation exon 26889001 26889228 . + . Parent=GSCOCT00015538001 | |
| 10500 chr1 manual_curation exon 26889345 26889403 . + . Parent=GSCOCT00015538001 | |
| 10501 chr1 manual_curation exon 26889494 26889569 . + . Parent=GSCOCT00015538001 | |
| 10502 chr1 manual_curation exon 26889658 26889696 . + . Parent=GSCOCT00015538001 | |
| 10503 chr1 manual_curation exon 26889815 26889882 . + . Parent=GSCOCT00015538001 | |
| 10504 chr1 manual_curation exon 26890000 26890071 . + . Parent=GSCOCT00015538001 | |
| 10505 chr1 manual_curation exon 26891120 26891199 . + . Parent=GSCOCT00015538001 | |
| 10506 chr1 manual_curation exon 26891340 26891418 . + . Parent=GSCOCT00015538001 | |
| 10507 chr1 manual_curation exon 26891522 26891615 . + . Parent=GSCOCT00015538001 | |
| 10508 chr1 manual_curation exon 26891712 26891887 . + . Parent=GSCOCT00015538001 | |
| 10509 chr1 manual_curation exon 26892554 26892799 . + . Parent=GSCOCT00015538001 | |
| 10510 chr1 manual_curation exon 26892884 26893005 . + . Parent=GSCOCT00015538001 | |
| 10511 chr1 manual_curation exon 26893429 26893573 . + . Parent=GSCOCT00015538001 | |
| 10512 chr1 manual_curation exon 26894543 26894715 . + . Parent=GSCOCT00015538001 | |
| 10513 chr1 manual_curation exon 26894798 26894897 . + . Parent=GSCOCT00015538001 | |
| 10514 chr1 manual_curation exon 26895469 26895605 . + . Parent=GSCOCT00015538001 | |
| 10515 chr1 manual_curation exon 26895721 26895922 . + . Parent=GSCOCT00015538001 | |
| 10516 chr1 manual_curation exon 26898396 26898483 . + . Parent=GSCOCT00015538001 | |
| 10517 chr1 manual_curation exon 26898567 26898730 . + . Parent=GSCOCT00015538001 | |
| 10518 chr1 manual_curation CDS 26889389 26889403 . + 0 Parent=GSCOCT00015538001 | |
| 10519 chr1 manual_curation CDS 26889494 26889569 . + 0 Parent=GSCOCT00015538001 | |
| 10520 chr1 manual_curation CDS 26889658 26889696 . + 1 Parent=GSCOCT00015538001 | |
| 10521 chr1 manual_curation CDS 26889815 26889882 . + 1 Parent=GSCOCT00015538001 | |
| 10522 chr1 manual_curation CDS 26890000 26890071 . + 0 Parent=GSCOCT00015538001 | |
| 10523 chr1 manual_curation CDS 26891120 26891199 . + 0 Parent=GSCOCT00015538001 | |
| 10524 chr1 manual_curation CDS 26891340 26891418 . + 2 Parent=GSCOCT00015538001 | |
| 10525 chr1 manual_curation CDS 26891522 26891615 . + 0 Parent=GSCOCT00015538001 | |
| 10526 chr1 manual_curation CDS 26891712 26891887 . + 1 Parent=GSCOCT00015538001 | |
| 10527 chr1 manual_curation CDS 26892554 26892799 . + 0 Parent=GSCOCT00015538001 | |
| 10528 chr1 manual_curation CDS 26892884 26893005 . + 0 Parent=GSCOCT00015538001 | |
| 10529 chr1 manual_curation CDS 26893429 26893573 . + 2 Parent=GSCOCT00015538001 | |
| 10530 chr1 manual_curation CDS 26894543 26894715 . + 0 Parent=GSCOCT00015538001 | |
| 10531 chr1 manual_curation CDS 26894798 26894897 . + 2 Parent=GSCOCT00015538001 | |
| 10532 chr1 manual_curation CDS 26895469 26895605 . + 0 Parent=GSCOCT00015538001 | |
| 10533 chr1 manual_curation CDS 26895721 26895922 . + 2 Parent=GSCOCT00015538001 | |
| 10534 chr1 manual_curation CDS 26898396 26898483 . + 0 Parent=GSCOCT00015538001 | |
| 10535 chr1 manual_curation CDS 26898567 26898730 . + 1 Parent=GSCOCT00015538001 | |
| 10536 chr1 manual_curation gene 26898843 26904617 . + . ID=GSCOCG00015539001;Name=Cc01_g08350 | |
| 10537 chr1 manual_curation mRNA 26898843 26904617 . + . ID=GSCOCT00015539001;Parent=GSCOCG00015539001;Name=Cc01_g08350 | |
| 10538 chr1 manual_curation polypeptide 26898843 26904078 . + . ID=GSCOCP00015539001;Dbxref=InterPro:IPR003395,PFAM:PF02463,SwissProt:Q5R4K5,SwissProt:Q9CW03,SwissProt:Q9UQE7,TAIR:AT2G27170.1,TAIR:AT3G47460.1,TAIR:AT5G62410.1,TrEMBL:B9SUJ2,TrEMBL:F6H9I4,TrEMBL:I1JIN1;Derives_from=GSCOCT00015539001;Name=Cc01_g08350;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0005694,CC_EC_number:missing_EC_number,PRODUCT:Putative Structural maintenance of chromosomes protein 3,CC_functional_completeness:fragment,CC_gene:Smc3,CC_gene:SMC3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015539001~ Putative Structural maintenance of chromosomes protein 3~ Smc3~ fragment;original_location=join(1278690..1278717%2C1278927..1279120%2C1279215..1279406%2C1279496..1279679%2C1279756..1279826%2C1279899..1280050%2C1280609..1280777%2C1280873..1281019%2C1281737..1281832%2C1282128..1282302%2C1283735..1283925);owner=coffea | |
| 10539 chr1 manual_curation exon 26904325 26904617 . + . Parent=GSCOCT00015539001 | |
| 10540 chr1 manual_curation exon 26898843 26898870 . + . Parent=GSCOCT00015539001 | |
| 10541 chr1 manual_curation exon 26899080 26899273 . + . Parent=GSCOCT00015539001 | |
| 10542 chr1 manual_curation exon 26899368 26899559 . + . Parent=GSCOCT00015539001 | |
| 10543 chr1 manual_curation exon 26899649 26899832 . + . Parent=GSCOCT00015539001 | |
| 10544 chr1 manual_curation exon 26899909 26899979 . + . Parent=GSCOCT00015539001 | |
| 10545 chr1 manual_curation exon 26900052 26900203 . + . Parent=GSCOCT00015539001 | |
| 10546 chr1 manual_curation exon 26900762 26900930 . + . Parent=GSCOCT00015539001 | |
| 10547 chr1 manual_curation exon 26901026 26901172 . + . Parent=GSCOCT00015539001 | |
| 10548 chr1 manual_curation exon 26901890 26901985 . + . Parent=GSCOCT00015539001 | |
| 10549 chr1 manual_curation exon 26902281 26902455 . + . Parent=GSCOCT00015539001 | |
| 10550 chr1 manual_curation exon 26903888 26904079 . + . Parent=GSCOCT00015539001 | |
| 10551 chr1 manual_curation CDS 26898843 26898870 . + 0 Parent=GSCOCT00015539001 | |
| 10552 chr1 manual_curation CDS 26899080 26899273 . + 1 Parent=GSCOCT00015539001 | |
| 10553 chr1 manual_curation CDS 26899368 26899559 . + 0 Parent=GSCOCT00015539001 | |
| 10554 chr1 manual_curation CDS 26899649 26899832 . + 0 Parent=GSCOCT00015539001 | |
| 10555 chr1 manual_curation CDS 26899909 26899979 . + 1 Parent=GSCOCT00015539001 | |
| 10556 chr1 manual_curation CDS 26900052 26900203 . + 0 Parent=GSCOCT00015539001 | |
| 10557 chr1 manual_curation CDS 26900762 26900930 . + 2 Parent=GSCOCT00015539001 | |
| 10558 chr1 manual_curation CDS 26901026 26901172 . + 0 Parent=GSCOCT00015539001 | |
| 10559 chr1 manual_curation CDS 26901890 26901985 . + 0 Parent=GSCOCT00015539001 | |
| 10560 chr1 manual_curation CDS 26902281 26902455 . + 0 Parent=GSCOCT00015539001 | |
| 10561 chr1 manual_curation CDS 26903888 26904078 . + 1 Parent=GSCOCT00015539001 | |
| 10562 chr1 manual_curation gene 26909931 26913760 . + . ID=GSCOCG00015542001;Name=Cc01_g08360 | |
| 10563 chr1 manual_curation mRNA 26909931 26913760 . + . ID=GSCOCT00015542001;Parent=GSCOCG00015542001;Name=Cc01_g08360 | |
| 10564 chr1 manual_curation polypeptide 26909931 26913760 . + . ID=GSCOCP00015542001;Dbxref=GENE3D:G3DSA:3.20.20.300,InterPro:IPR001764,InterPro:IPR002772,InterPro:IPR017853,PFAM:PF00933,PFAM:PF01915,PRINTS:PR00133,SUPERFAMILY:SSF51445,SUPERFAMILY:SSF52279,SwissProt:P33363,SwissProt:Q23892,SwissProt:Q56078,TAIR:AT5G04885.1,TAIR:AT5G20940.1,TAIR:AT5G20950.1,TrEMBL:F6H5Y9,TrEMBL:F6H5Z0,TrEMBL:F6HF71;Derives_from=GSCOCT00015542001;Name=Cc01_g08360;Ontology_term=CC_evidence_code:ISS,GO:0005975,CC_EC_number:3.2.1.21,PRODUCT:Putative Lysosomal beta glucosidase,CC_functional_completeness:fragment,CC_gene:gluA,CC_gene:bglX;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015542001~ Putative Lysosomal beta glucosidase~ gluA~ fragment;original_location=join(1289778..1290208%2C1290850..1290940%2C1291086..1291231%2C1291722..1291965%2C1292070..1292174%2C1292265..1292447%2C1292562..1292766%2C1293120..1293607);owner=coffea | |
| 10565 chr1 manual_curation exon 26909931 26910361 . + . Parent=GSCOCT00015542001 | |
| 10566 chr1 manual_curation exon 26911003 26911093 . + . Parent=GSCOCT00015542001 | |
| 10567 chr1 manual_curation exon 26911239 26911384 . + . Parent=GSCOCT00015542001 | |
| 10568 chr1 manual_curation exon 26911875 26912118 . + . Parent=GSCOCT00015542001 | |
| 10569 chr1 manual_curation exon 26912223 26912327 . + . Parent=GSCOCT00015542001 | |
| 10570 chr1 manual_curation exon 26912418 26912600 . + . Parent=GSCOCT00015542001 | |
| 10571 chr1 manual_curation exon 26912715 26912919 . + . Parent=GSCOCT00015542001 | |
| 10572 chr1 manual_curation exon 26913273 26913760 . + . Parent=GSCOCT00015542001 | |
| 10573 chr1 manual_curation CDS 26909931 26910361 . + 0 Parent=GSCOCT00015542001 | |
| 10574 chr1 manual_curation CDS 26911003 26911093 . + 2 Parent=GSCOCT00015542001 | |
| 10575 chr1 manual_curation CDS 26911239 26911384 . + 0 Parent=GSCOCT00015542001 | |
| 10576 chr1 manual_curation CDS 26911875 26912118 . + 2 Parent=GSCOCT00015542001 | |
| 10577 chr1 manual_curation CDS 26912223 26912327 . + 0 Parent=GSCOCT00015542001 | |
| 10578 chr1 manual_curation CDS 26912418 26912600 . + 0 Parent=GSCOCT00015542001 | |
| 10579 chr1 manual_curation CDS 26912715 26912919 . + 0 Parent=GSCOCT00015542001 | |
| 10580 chr1 manual_curation CDS 26913273 26913760 . + 1 Parent=GSCOCT00015542001 | |
| 10581 chr1 manual_curation gene 26915194 26916685 . - . ID=GSCOCG00015543001;Name=Cc01_g08370 | |
| 10582 chr1 manual_curation mRNA 26915194 26916685 . - . ID=GSCOCT00015543001;Parent=GSCOCG00015543001;Name=Cc01_g08370 | |
| 10583 chr1 manual_curation polypeptide 26915194 26916685 . - . ID=GSCOCP00015543001;Dbxref=GENE3D:G3DSA:3.20.20.300,InterPro:IPR001764,InterPro:IPR002772,InterPro:IPR017853,PFAM:PF00933,PFAM:PF01915,SUPERFAMILY:SSF51445,SUPERFAMILY:SSF52279,SwissProt:P33363,SwissProt:Q23892,SwissProt:Q56078,TAIR:AT5G04885.1,TAIR:AT5G20940.1,TAIR:AT5G20950.1,TrEMBL:F6H5Y9,TrEMBL:F6H5Z0,TrEMBL:Q7XAS3;Derives_from=GSCOCT00015543001;Name=Cc01_g08370;Ontology_term=CC_evidence_code:ISS,GO:0005975,CC_EC_number:3.2.1.21,PRODUCT:Putative Lysosomal beta glucosidase,CC_functional_completeness:fragment,CC_gene:gluA,CC_gene:bglX;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015543001~ Putative Lysosomal beta glucosidase~ gluA~ fragment;original_location=complement(join(1296443..1296532%2C1296239..1296343%2C1295953..1296135%2C1295626..1295840%2C1295041..1295569));owner=coffea | |
| 10584 chr1 manual_curation exon 26915194 26915722 . - . Parent=GSCOCT00015543001 | |
| 10585 chr1 manual_curation exon 26915779 26915993 . - . Parent=GSCOCT00015543001 | |
| 10586 chr1 manual_curation exon 26916106 26916288 . - . Parent=GSCOCT00015543001 | |
| 10587 chr1 manual_curation exon 26916392 26916496 . - . Parent=GSCOCT00015543001 | |
| 10588 chr1 manual_curation exon 26916596 26916685 . - . Parent=GSCOCT00015543001 | |
| 10589 chr1 manual_curation CDS 26915194 26915722 . - 2 Parent=GSCOCT00015543001 | |
| 10590 chr1 manual_curation CDS 26915779 26915993 . - 0 Parent=GSCOCT00015543001 | |
| 10591 chr1 manual_curation CDS 26916106 26916288 . - 0 Parent=GSCOCT00015543001 | |
| 10592 chr1 manual_curation CDS 26916392 26916496 . - 0 Parent=GSCOCT00015543001 | |
| 10593 chr1 manual_curation CDS 26916596 26916685 . - 0 Parent=GSCOCT00015543001 | |
| 10594 chr1 manual_curation gene 26920035 26924928 . - . ID=GSCOCG00015544001;Name=Cc01_g08380 | |
| 10595 chr1 manual_curation mRNA 26920035 26924928 . - . ID=GSCOCT00015544001;Parent=GSCOCG00015544001;Name=Cc01_g08380 | |
| 10596 chr1 manual_curation polypeptide 26920571 26924680 . - . ID=GSCOCP00015544001;Dbxref=GENE3D:G3DSA:3.20.20.300,InterPro:IPR001764,InterPro:IPR002772,InterPro:IPR017853,PFAM:PF00933,PFAM:PF01915,PRINTS:PR00133,SUPERFAMILY:SSF51445,SUPERFAMILY:SSF52279,SwissProt:P33363,SwissProt:Q23892,SwissProt:Q56078,TAIR:AT5G04885.1,TAIR:AT5G20940.1,TAIR:AT5G20950.1,TrEMBL:B9HQH6,TrEMBL:F6HAB0,TrEMBL:Q7XAS3;Derives_from=GSCOCT00015544001;Name=Cc01_g08380;Ontology_term=CC_evidence_code:ISS,GO:0005975,CC_EC_number:3.2.1.21,PRODUCT:Putative Lysosomal beta glucosidase,CC_functional_completeness:fragment,CC_gene:gluA,CC_gene:bglX;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015544001~ Putative Lysosomal beta glucosidase~ gluA~ fragment;original_location=complement(join(1304299..1304527%2C1303820..1304024%2C1302927..1303017%2C1302706..1302851%2C1301891..1302134%2C1301701..1301805%2C1301321..1301503%2C1301016..1301217%2C1300418..1300905));owner=coffea | |
| 10597 chr1 manual_curation exon 26924837 26924928 . - . Parent=GSCOCT00015544001 | |
| 10598 chr1 manual_curation exon 26920035 26921058 . - . Parent=GSCOCT00015544001 | |
| 10599 chr1 manual_curation exon 26921169 26921370 . - . Parent=GSCOCT00015544001 | |
| 10600 chr1 manual_curation exon 26921474 26921656 . - . Parent=GSCOCT00015544001 | |
| 10601 chr1 manual_curation exon 26921854 26921958 . - . Parent=GSCOCT00015544001 | |
| 10602 chr1 manual_curation exon 26922044 26922287 . - . Parent=GSCOCT00015544001 | |
| 10603 chr1 manual_curation exon 26922859 26923004 . - . Parent=GSCOCT00015544001 | |
| 10604 chr1 manual_curation exon 26923080 26923170 . - . Parent=GSCOCT00015544001 | |
| 10605 chr1 manual_curation exon 26923973 26924177 . - . Parent=GSCOCT00015544001 | |
| 10606 chr1 manual_curation exon 26924452 26924722 . - . Parent=GSCOCT00015544001 | |
| 10607 chr1 manual_curation CDS 26920571 26921058 . - 1 Parent=GSCOCT00015544001 | |
| 10608 chr1 manual_curation CDS 26921169 26921370 . - 0 Parent=GSCOCT00015544001 | |
| 10609 chr1 manual_curation CDS 26921474 26921656 . - 0 Parent=GSCOCT00015544001 | |
| 10610 chr1 manual_curation CDS 26921854 26921958 . - 0 Parent=GSCOCT00015544001 | |
| 10611 chr1 manual_curation CDS 26922044 26922287 . - 2 Parent=GSCOCT00015544001 | |
| 10612 chr1 manual_curation CDS 26922859 26923004 . - 0 Parent=GSCOCT00015544001 | |
| 10613 chr1 manual_curation CDS 26923080 26923170 . - 2 Parent=GSCOCT00015544001 | |
| 10614 chr1 manual_curation CDS 26923973 26924177 . - 1 Parent=GSCOCT00015544001 | |
| 10615 chr1 manual_curation CDS 26924452 26924680 . - 0 Parent=GSCOCT00015544001 | |
| 10616 chr1 manual_curation gene 26931927 26932770 . - . ID=GSCOCG00015545001;Name=Cc01_g08390 | |
| 10617 chr1 manual_curation mRNA 26931927 26932770 . - . ID=GSCOCT00015545001;Parent=GSCOCG00015545001;Name=Cc01_g08390 | |
| 10618 chr1 manual_curation polypeptide 26931927 26932770 . - . ID=GSCOCP00015545001;Dbxref=InterPro:IPR002772,PFAM:PF01915,SUPERFAMILY:SSF52279,TAIR:AT5G04885.1,TAIR:AT5G20940.1,TAIR:AT5G20950.1,TrEMBL:B9HQH6,TrEMBL:B9I5V9,TrEMBL:Q7XAS3;Derives_from=GSCOCT00015545001;Name=Cc01_g08390;Ontology_term=CC_evidence_code:ISS,GO:0005975,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015545001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1312327..1312617%2C1312171..1312196%2C1311774..1312071));owner=coffea | |
| 10619 chr1 manual_curation exon 26931927 26932224 . - . Parent=GSCOCT00015545001 | |
| 10620 chr1 manual_curation exon 26932324 26932349 . - . Parent=GSCOCT00015545001 | |
| 10621 chr1 manual_curation exon 26932480 26932770 . - . Parent=GSCOCT00015545001 | |
| 10622 chr1 manual_curation CDS 26931927 26932224 . - 2 Parent=GSCOCT00015545001 | |
| 10623 chr1 manual_curation CDS 26932324 26932349 . - 0 Parent=GSCOCT00015545001 | |
| 10624 chr1 manual_curation CDS 26932480 26932770 . - 0 Parent=GSCOCT00015545001 | |
| 10625 chr1 manual_curation gene 26939712 26944619 . - . ID=GSCOCG00015546001;Name=Cc01_g08400 | |
| 10626 chr1 manual_curation mRNA 26939712 26944619 . - . ID=GSCOCT00015546001;Parent=GSCOCG00015546001;Name=Cc01_g08400 | |
| 10627 chr1 manual_curation polypeptide 26939712 26944619 . - . ID=GSCOCP00015546001;Dbxref=GENE3D:G3DSA:3.20.20.300,InterPro:IPR001764,InterPro:IPR002772,InterPro:IPR017853,PFAM:PF00933,PFAM:PF01915,PRINTS:PR00133,SUPERFAMILY:SSF51445,SUPERFAMILY:SSF52279,SwissProt:P33363,SwissProt:Q23892,SwissProt:Q56078,TAIR:AT5G04885.1,TAIR:AT5G20940.1,TAIR:AT5G20950.1,TrEMBL:F6HAB0,TrEMBL:Q6UY81,TrEMBL:Q75Z80;Derives_from=GSCOCT00015546001;Name=Cc01_g08400;Ontology_term=CC_evidence_code:ISS,GO:0005975,CC_EC_number:3.2.1.21,PRODUCT:Putative Lysosomal beta glucosidase,CC_functional_completeness:fragment,CC_gene:gluA,CC_gene:bglX;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015546001~ Putative Lysosomal beta glucosidase~ gluA~ fragment;original_location=complement(join(1324281..1324466%2C1323468..1323537%2C1322262..1322445%2C1321883..1321902%2C1321693..1321793%2C1321439..1321612%2C1320845..1321081%2C1320687..1320740%2C1320252..1320314%2C1319906..1320073%2C1319559..1319834));owner=coffea | |
| 10628 chr1 manual_curation exon 26939712 26939987 . - . Parent=GSCOCT00015546001 | |
| 10629 chr1 manual_curation exon 26940059 26940226 . - . Parent=GSCOCT00015546001 | |
| 10630 chr1 manual_curation exon 26940405 26940467 . - . Parent=GSCOCT00015546001 | |
| 10631 chr1 manual_curation exon 26940840 26940893 . - . Parent=GSCOCT00015546001 | |
| 10632 chr1 manual_curation exon 26940998 26941234 . - . Parent=GSCOCT00015546001 | |
| 10633 chr1 manual_curation exon 26941592 26941765 . - . Parent=GSCOCT00015546001 | |
| 10634 chr1 manual_curation exon 26941846 26941946 . - . Parent=GSCOCT00015546001 | |
| 10635 chr1 manual_curation exon 26942036 26942055 . - . Parent=GSCOCT00015546001 | |
| 10636 chr1 manual_curation exon 26942415 26942598 . - . Parent=GSCOCT00015546001 | |
| 10637 chr1 manual_curation exon 26943621 26943690 . - . Parent=GSCOCT00015546001 | |
| 10638 chr1 manual_curation exon 26944434 26944619 . - . Parent=GSCOCT00015546001 | |
| 10639 chr1 manual_curation CDS 26939712 26939987 . - 0 Parent=GSCOCT00015546001 | |
| 10640 chr1 manual_curation CDS 26940059 26940226 . - 0 Parent=GSCOCT00015546001 | |
| 10641 chr1 manual_curation CDS 26940405 26940467 . - 0 Parent=GSCOCT00015546001 | |
| 10642 chr1 manual_curation CDS 26940840 26940893 . - 0 Parent=GSCOCT00015546001 | |
| 10643 chr1 manual_curation CDS 26940998 26941234 . - 0 Parent=GSCOCT00015546001 | |
| 10644 chr1 manual_curation CDS 26941592 26941765 . - 0 Parent=GSCOCT00015546001 | |
| 10645 chr1 manual_curation CDS 26941846 26941946 . - 1 Parent=GSCOCT00015546001 | |
| 10646 chr1 manual_curation CDS 26942036 26942055 . - 2 Parent=GSCOCT00015546001 | |
| 10647 chr1 manual_curation CDS 26942415 26942598 . - 1 Parent=GSCOCT00015546001 | |
| 10648 chr1 manual_curation CDS 26943621 26943690 . - 0 Parent=GSCOCT00015546001 | |
| 10649 chr1 manual_curation CDS 26944434 26944619 . - 0 Parent=GSCOCT00015546001 | |
| 10650 chr1 manual_curation gene 26948151 26952697 . - . ID=GSCOCG00015547001;Name=Cc01_g08410 | |
| 10651 chr1 manual_curation mRNA 26948151 26952697 . - . ID=GSCOCT00015547001;Parent=GSCOCG00015547001;Name=Cc01_g08410 | |
| 10652 chr1 manual_curation polypeptide 26948151 26952697 . - . ID=GSCOCP00015547001;Dbxref=GENE3D:G3DSA:3.20.20.300,InterPro:IPR001764,InterPro:IPR002772,InterPro:IPR017853,PFAM:PF00933,PFAM:PF01915,PRINTS:PR00133,SUPERFAMILY:SSF51445,SUPERFAMILY:SSF52279,SwissProt:P33363,SwissProt:Q23892,SwissProt:Q56078,TAIR:AT5G04885.1,TAIR:AT5G20940.1,TAIR:AT5G20950.1,TrEMBL:A9PF62,TrEMBL:D7U8L2,TrEMBL:F6HAB0;Derives_from=GSCOCT00015547001;Name=Cc01_g08410;Ontology_term=CC_evidence_code:ISS,GO:0005975,CC_EC_number:3.2.1.21,PRODUCT:Putative Lysosomal beta glucosidase,CC_functional_completeness:fragment,CC_gene:gluA,CC_gene:bglX;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015547001~ Putative Lysosomal beta glucosidase~ gluA~ fragment;original_location=complement(join(1332325..1332544%2C1331000..1331204%2C1330453..1330543%2C1330230..1330375%2C1329646..1329889%2C1329435..1329539%2C1329128..1329310%2C1328830..1329031%2C1327998..1328494));owner=coffea | |
| 10653 chr1 manual_curation exon 26948151 26948647 . - . Parent=GSCOCT00015547001 | |
| 10654 chr1 manual_curation exon 26948983 26949184 . - . Parent=GSCOCT00015547001 | |
| 10655 chr1 manual_curation exon 26949281 26949463 . - . Parent=GSCOCT00015547001 | |
| 10656 chr1 manual_curation exon 26949588 26949692 . - . Parent=GSCOCT00015547001 | |
| 10657 chr1 manual_curation exon 26949799 26950042 . - . Parent=GSCOCT00015547001 | |
| 10658 chr1 manual_curation exon 26950383 26950528 . - . Parent=GSCOCT00015547001 | |
| 10659 chr1 manual_curation exon 26950606 26950696 . - . Parent=GSCOCT00015547001 | |
| 10660 chr1 manual_curation exon 26951153 26951357 . - . Parent=GSCOCT00015547001 | |
| 10661 chr1 manual_curation exon 26952478 26952697 . - . Parent=GSCOCT00015547001 | |
| 10662 chr1 manual_curation CDS 26948151 26948647 . - 1 Parent=GSCOCT00015547001 | |
| 10663 chr1 manual_curation CDS 26948983 26949184 . - 0 Parent=GSCOCT00015547001 | |
| 10664 chr1 manual_curation CDS 26949281 26949463 . - 0 Parent=GSCOCT00015547001 | |
| 10665 chr1 manual_curation CDS 26949588 26949692 . - 0 Parent=GSCOCT00015547001 | |
| 10666 chr1 manual_curation CDS 26949799 26950042 . - 2 Parent=GSCOCT00015547001 | |
| 10667 chr1 manual_curation CDS 26950383 26950528 . - 0 Parent=GSCOCT00015547001 | |
| 10668 chr1 manual_curation CDS 26950606 26950696 . - 2 Parent=GSCOCT00015547001 | |
| 10669 chr1 manual_curation CDS 26951153 26951357 . - 1 Parent=GSCOCT00015547001 | |
| 10670 chr1 manual_curation CDS 26952478 26952697 . - 0 Parent=GSCOCT00015547001 | |
| 10671 chr1 manual_curation gene 26957486 26967663 . - . ID=GSCOCG00015548001;Name=Cc01_g08420 | |
| 10672 chr1 manual_curation mRNA 26957486 26967663 . - . ID=GSCOCT00015548001;Parent=GSCOCG00015548001;Name=Cc01_g08420 | |
| 10673 chr1 manual_curation polypeptide 26957680 26967663 . - . ID=GSCOCP00015548001;Dbxref=GENE3D:G3DSA:3.10.20.30,GENE3D:G3DSA:3.30.365.10,GENE3D:G3DSA:3.30.390.50,GENE3D:G3DSA:3.30.465.10,GENE3D:G3DSA:3.90.1170.50,InterPro:IPR000674,InterPro:IPR001041,InterPro:IPR002346,InterPro:IPR002888,InterPro:IPR005107,InterPro:IPR006058,InterPro:IPR008274,InterPro:IPR012675,InterPro:IPR016166,InterPro:IPR016169,InterPro:IPR016208,PFAM:PF00111,PFAM:PF00941,PFAM:PF01315,PFAM:PF01799,PFAM:PF02738,PFAM:PF03450,PIR:PIRSF000127,PROFILE:PS51085,PROFILE:PS51387,PROSITE:PS00197,SUPERFAMILY:SSF47741,SUPERFAMILY:SSF54292,SUPERFAMILY:SSF54665,SUPERFAMILY:SSF55447,SUPERFAMILY:SSF56003,SUPERFAMILY:SSF56176,SwissProt:Q7G191,SwissProt:Q7G192,SwissProt:Q7G9P4,TAIR:AT1G04580.1,TAIR:AT2G27150.1,TAIR:AT3G43600.1,TrEMBL:B9RQ25,TrEMBL:F6HAB3,TrEMBL:F6I435;Derives_from=GSCOCT00015548001;Name=Cc01_g08420;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005506,GO:0009055,GO:0016491,GO:0046872,GO:0050660,GO:0051536,GO:0055114,CC_EC_number:1.2.3.1,PRODUCT:Aldehyde oxidase 4,CC_functional_completeness:complete,CC_gene:AAO4,CC_gene:AAO2,CC_gene:AAO3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015548001~ Aldehyde oxidase 4~ AAO4~ complete;original_location=complement(join(1347351..1347510%2C1344416..1346101%2C1343298..1343557%2C1342976..1343185%2C1342607..1342825%2C1340628..1341593%2C1340010..1340105%2C1339756..1339854%2C1338949..1339138%2C1337527..1337741));owner=coffea | |
| 10674 chr1 manual_curation exon 26957486 26957894 . - . Parent=GSCOCT00015548001 | |
| 10675 chr1 manual_curation exon 26959102 26959291 . - . Parent=GSCOCT00015548001 | |
| 10676 chr1 manual_curation exon 26959909 26960007 . - . Parent=GSCOCT00015548001 | |
| 10677 chr1 manual_curation exon 26960163 26960258 . - . Parent=GSCOCT00015548001 | |
| 10678 chr1 manual_curation exon 26960781 26961746 . - . Parent=GSCOCT00015548001 | |
| 10679 chr1 manual_curation exon 26962760 26962978 . - . Parent=GSCOCT00015548001 | |
| 10680 chr1 manual_curation exon 26963129 26963338 . - . Parent=GSCOCT00015548001 | |
| 10681 chr1 manual_curation exon 26963451 26963710 . - . Parent=GSCOCT00015548001 | |
| 10682 chr1 manual_curation exon 26964569 26966254 . - . Parent=GSCOCT00015548001 | |
| 10683 chr1 manual_curation exon 26967504 26967663 . - . Parent=GSCOCT00015548001 | |
| 10684 chr1 manual_curation CDS 26957680 26957894 . - 1 Parent=GSCOCT00015548001 | |
| 10685 chr1 manual_curation CDS 26959102 26959291 . - 0 Parent=GSCOCT00015548001 | |
| 10686 chr1 manual_curation CDS 26959909 26960007 . - 0 Parent=GSCOCT00015548001 | |
| 10687 chr1 manual_curation CDS 26960163 26960258 . - 0 Parent=GSCOCT00015548001 | |
| 10688 chr1 manual_curation CDS 26960781 26961746 . - 0 Parent=GSCOCT00015548001 | |
| 10689 chr1 manual_curation CDS 26962760 26962978 . - 0 Parent=GSCOCT00015548001 | |
| 10690 chr1 manual_curation CDS 26963129 26963338 . - 0 Parent=GSCOCT00015548001 | |
| 10691 chr1 manual_curation CDS 26963451 26963710 . - 1 Parent=GSCOCT00015548001 | |
| 10692 chr1 manual_curation CDS 26964569 26966254 . - 1 Parent=GSCOCT00015548001 | |
| 10693 chr1 manual_curation CDS 26967504 26967663 . - 0 Parent=GSCOCT00015548001 | |
| 10694 chr1 manual_curation gene 26972303 26980218 . - . ID=GSCOCG00015549001;Name=Cc01_g08430 | |
| 10695 chr1 manual_curation mRNA 26972303 26980218 . - . ID=GSCOCT00015549001;Parent=GSCOCG00015549001;Name=Cc01_g08430 | |
| 10696 chr1 manual_curation polypeptide 26972303 26980218 . - . ID=GSCOCP00015549001;Dbxref=GENE3D:G3DSA:3.10.20.30,GENE3D:G3DSA:3.30.365.10,GENE3D:G3DSA:3.30.390.50,GENE3D:G3DSA:3.30.465.10,GENE3D:G3DSA:3.90.1170.50,InterPro:IPR000674,InterPro:IPR001041,InterPro:IPR002346,InterPro:IPR002888,InterPro:IPR005107,InterPro:IPR006058,InterPro:IPR008274,InterPro:IPR012675,InterPro:IPR016166,InterPro:IPR016169,InterPro:IPR016208,PFAM:PF00111,PFAM:PF00941,PFAM:PF01315,PFAM:PF01799,PFAM:PF02738,PFAM:PF03450,PIR:PIRSF000127,PROFILE:PS51085,PROFILE:PS51387,PROSITE:PS00197,SUPERFAMILY:SSF47741,SUPERFAMILY:SSF54292,SUPERFAMILY:SSF54665,SUPERFAMILY:SSF55447,SUPERFAMILY:SSF56003,SUPERFAMILY:SSF56176,SwissProt:Q7G191,SwissProt:Q7G192,SwissProt:Q7G9P4,TAIR:AT1G04580.1,TAIR:AT2G27150.1,TAIR:AT3G43600.1,TrEMBL:F6HAB3,TrEMBL:F6I435,TrEMBL:Q9FV23;Derives_from=GSCOCT00015549001;Name=Cc01_g08430;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005506,GO:0009055,GO:0016491,GO:0046872,GO:0050660,GO:0051536,GO:0055114,CC_EC_number:1.2.3.1,PRODUCT:Aldehyde oxidase 2,CC_functional_completeness:complete,CC_gene:AAO2,CC_gene:AAO4,CC_gene:AAO3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015549001~ Aldehyde oxidase 2~ AAO2~ complete;original_location=complement(join(1359894..1360065%2C1357109..1358800%2C1356443..1356702%2C1356122..1356331%2C1355779..1355997%2C1354423..1355388%2C1353725..1353820%2C1353419..1353517%2C1353044..1353233%2C1352150..1352385));owner=coffea | |
| 10697 chr1 manual_curation exon 26972303 26972538 . - . Parent=GSCOCT00015549001 | |
| 10698 chr1 manual_curation exon 26973197 26973386 . - . Parent=GSCOCT00015549001 | |
| 10699 chr1 manual_curation exon 26973572 26973670 . - . Parent=GSCOCT00015549001 | |
| 10700 chr1 manual_curation exon 26973878 26973973 . - . Parent=GSCOCT00015549001 | |
| 10701 chr1 manual_curation exon 26974576 26975541 . - . Parent=GSCOCT00015549001 | |
| 10702 chr1 manual_curation exon 26975932 26976150 . - . Parent=GSCOCT00015549001 | |
| 10703 chr1 manual_curation exon 26976275 26976484 . - . Parent=GSCOCT00015549001 | |
| 10704 chr1 manual_curation exon 26976596 26976855 . - . Parent=GSCOCT00015549001 | |
| 10705 chr1 manual_curation exon 26977262 26978953 . - . Parent=GSCOCT00015549001 | |
| 10706 chr1 manual_curation exon 26980047 26980218 . - . Parent=GSCOCT00015549001 | |
| 10707 chr1 manual_curation CDS 26972303 26972538 . - 1 Parent=GSCOCT00015549001 | |
| 10708 chr1 manual_curation CDS 26973197 26973386 . - 0 Parent=GSCOCT00015549001 | |
| 10709 chr1 manual_curation CDS 26973572 26973670 . - 0 Parent=GSCOCT00015549001 | |
| 10710 chr1 manual_curation CDS 26973878 26973973 . - 0 Parent=GSCOCT00015549001 | |
| 10711 chr1 manual_curation CDS 26974576 26975541 . - 0 Parent=GSCOCT00015549001 | |
| 10712 chr1 manual_curation CDS 26975932 26976150 . - 0 Parent=GSCOCT00015549001 | |
| 10713 chr1 manual_curation CDS 26976275 26976484 . - 0 Parent=GSCOCT00015549001 | |
| 10714 chr1 manual_curation CDS 26976596 26976855 . - 1 Parent=GSCOCT00015549001 | |
| 10715 chr1 manual_curation CDS 26977262 26978953 . - 1 Parent=GSCOCT00015549001 | |
| 10716 chr1 manual_curation CDS 26980047 26980218 . - 0 Parent=GSCOCT00015549001 | |
| 10717 chr1 manual_curation gene 26983126 26987454 . + . ID=GSCOCG00015550001;Name=Cc01_g08440 | |
| 10718 chr1 manual_curation mRNA 26983126 26987454 . + . ID=GSCOCT00015550001;Parent=GSCOCG00015550001;Name=Cc01_g08440 | |
| 10719 chr1 manual_curation polypeptide 26983126 26987454 . + . ID=GSCOCP00015550001;Dbxref=GENE3D:G3DSA:3.10.20.30,GENE3D:G3DSA:3.30.365.10,GENE3D:G3DSA:3.30.390.50,GENE3D:G3DSA:3.30.465.10,GENE3D:G3DSA:3.90.1170.50,InterPro:IPR000674,InterPro:IPR001041,InterPro:IPR002346,InterPro:IPR002888,InterPro:IPR005107,InterPro:IPR006058,InterPro:IPR008274,InterPro:IPR012675,InterPro:IPR016166,InterPro:IPR016169,PFAM:PF00111,PFAM:PF00941,PFAM:PF01315,PFAM:PF01799,PFAM:PF02738,PFAM:PF03450,PROFILE:PS51085,PROFILE:PS51387,PROSITE:PS00197,SUPERFAMILY:SSF47741,SUPERFAMILY:SSF54292,SUPERFAMILY:SSF54665,SUPERFAMILY:SSF55447,SUPERFAMILY:SSF56003,SUPERFAMILY:SSF56176,SwissProt:Q7G191,SwissProt:Q7G192,SwissProt:Q7G9P4,TAIR:AT1G04580.1,TAIR:AT2G27150.1,TAIR:AT3G43600.1,TrEMBL:A5C1M0,TrEMBL:B9RQ25,TrEMBL:F6HAB3;Derives_from=GSCOCT00015550001;Name=Cc01_g08440;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0009055,GO:0016491,GO:0046872,GO:0050660,GO:0051536,GO:0055114,CC_EC_number:1.2.3.1,PRODUCT:Aldehyde oxidase 4,CC_functional_completeness:fragment,CC_gene:AAO4,CC_gene:AAO2,CC_gene:AAO3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015550001~ Aldehyde oxidase 4~ AAO4~ fragment;original_location=join(1362973..1363144%2C1364238..1365929%2C1366336..1366595%2C1366707..1366916%2C1367041..1367301);owner=coffea | |
| 10720 chr1 manual_curation exon 26983126 26983297 . + . Parent=GSCOCT00015550001 | |
| 10721 chr1 manual_curation exon 26984391 26986082 . + . Parent=GSCOCT00015550001 | |
| 10722 chr1 manual_curation exon 26986489 26986748 . + . Parent=GSCOCT00015550001 | |
| 10723 chr1 manual_curation exon 26986860 26987069 . + . Parent=GSCOCT00015550001 | |
| 10724 chr1 manual_curation exon 26987194 26987454 . + . Parent=GSCOCT00015550001 | |
| 10725 chr1 manual_curation CDS 26983126 26983297 . + 0 Parent=GSCOCT00015550001 | |
| 10726 chr1 manual_curation CDS 26984391 26986082 . + 1 Parent=GSCOCT00015550001 | |
| 10727 chr1 manual_curation CDS 26986489 26986748 . + 1 Parent=GSCOCT00015550001 | |
| 10728 chr1 manual_curation CDS 26986860 26987069 . + 0 Parent=GSCOCT00015550001 | |
| 10729 chr1 manual_curation CDS 26987194 26987454 . + 0 Parent=GSCOCT00015550001 | |
| 10730 chr1 manual_curation gene 26994851 26996063 . - . ID=GSCOCG00010702001;Name=Cc01_g08450 | |
| 10731 chr1 manual_curation mRNA 26994851 26996063 . - . ID=GSCOCT00010702001;Parent=GSCOCG00010702001;Name=Cc01_g08450 | |
| 10732 chr1 manual_curation polypeptide 26994851 26996063 . - . ID=GSCOCP00010702001;Derives_from=GSCOCT00010702001;Name=Cc01_g08450;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00010702001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(4423..4567%2C3355..3470));owner=coffea | |
| 10733 chr1 manual_curation exon 26994851 26994966 . - . Parent=GSCOCT00010702001 | |
| 10734 chr1 manual_curation exon 26995919 26996063 . - . Parent=GSCOCT00010702001 | |
| 10735 chr1 manual_curation CDS 26994851 26994966 . - 1 Parent=GSCOCT00010702001 | |
| 10736 chr1 manual_curation CDS 26995919 26996063 . - 0 Parent=GSCOCT00010702001 | |
| 10737 chr1 manual_curation gene 26996698 26998587 . + . ID=GSCOCG00010703001;Name=Cc01_g08460 | |
| 10738 chr1 manual_curation mRNA 26996698 26998587 . + . ID=GSCOCT00010703001;Parent=GSCOCG00010703001;Name=Cc01_g08460 | |
| 10739 chr1 manual_curation polypeptide 26996698 26998059 . + . ID=GSCOCP00010703001;Dbxref=InterPro:IPR003480,PFAM:PF02458,SwissProt:O23917,SwissProt:Q8GSM7,SwissProt:Q9FI78,TAIR:AT2G19070.1,TAIR:AT5G48930.1,TAIR:AT5G57840.1,TrEMBL:F6HYK9,TrEMBL:H9DUD7;Derives_from=GSCOCT00010703001;Name=Cc01_g08460;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.3.1.144,PRODUCT:Putative Hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase,CC_functional_completeness:complete,CC_gene:HCT,CC_gene:HCBT2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00010703001~ Putative Hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase~ HCT~ complete;original_location=5202..6563;owner=coffea | |
| 10740 chr1 manual_curation exon 26996698 26998587 . + . Parent=GSCOCT00010703001 | |
| 10741 chr1 manual_curation CDS 26996698 26998059 . + 0 Parent=GSCOCT00010703001 | |
| 10742 chr1 manual_curation gene 27011307 27014813 . + . ID=GSCOCG00006216001;Name=Cc01_g08470 | |
| 10743 chr1 manual_curation mRNA 27011307 27014813 . + . ID=GSCOCT00006216001;Parent=GSCOCG00006216001;Name=Cc01_g08470 | |
| 10744 chr1 manual_curation polypeptide 27011474 27014575 . + . ID=GSCOCP00006216001;Dbxref=InterPro:IPR018612,PFAM:PF09745,SwissProt:Q568R1,SwissProt:Q5NCR9,SwissProt:Q9H0G5,TAIR:AT1G55928.1,TAIR:AT2G27280.1,TAIR:AT2G27285.1,TrEMBL:A5ACY7,TrEMBL:B9SCZ9,TrEMBL:C6T7E2;Derives_from=GSCOCT00006216001;Name=Cc01_g08470;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Nuclear speckle splicing regulatory protein 1,CC_functional_completeness:fragment,CC_gene:nsrp1,CC_gene:NSRP1,CC_gene:Nsrp1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00006216001~ Putative Nuclear speckle splicing regulatory protein 1~ nsrp1~ fragment;original_location=join(2231..2401%2C2498..2620%2C4062..4280%2C4943..5332);owner=coffea | |
| 10745 chr1 manual_curation exon 27011307 27011644 . + . Parent=GSCOCT00006216001 | |
| 10746 chr1 manual_curation exon 27011741 27011863 . + . Parent=GSCOCT00006216001 | |
| 10747 chr1 manual_curation exon 27013305 27013523 . + . Parent=GSCOCT00006216001 | |
| 10748 chr1 manual_curation exon 27014186 27014813 . + . Parent=GSCOCT00006216001 | |
| 10749 chr1 manual_curation CDS 27011474 27011644 . + 0 Parent=GSCOCT00006216001 | |
| 10750 chr1 manual_curation CDS 27011741 27011863 . + 0 Parent=GSCOCT00006216001 | |
| 10751 chr1 manual_curation CDS 27013305 27013523 . + 0 Parent=GSCOCT00006216001 | |
| 10752 chr1 manual_curation CDS 27014186 27014575 . + 0 Parent=GSCOCT00006216001 | |
| 10753 chr1 manual_curation gene 27018618 27020275 . + . ID=GSCOCG00006217001;Name=Cc01_g08480 | |
| 10754 chr1 manual_curation mRNA 27018618 27020275 . + . ID=GSCOCT00006217001;Parent=GSCOCG00006217001;Name=Cc01_g08480 | |
| 10755 chr1 manual_curation polypeptide 27018618 27020036 . + . ID=GSCOCP00006217001;Dbxref=GENE3D:G3DSA:2.40.70.10,InterPro:IPR001461,InterPro:IPR009007,InterPro:IPR021109,PANTHER:PTHR13683,PFAM:PF00026,PRINTS:PR00792,SUPERFAMILY:SSF50630,SwissProt:Q766C2,SwissProt:Q766C3,SwissProt:Q9LS40,TAIR:AT3G25700.1,TAIR:AT3G52500.1,TAIR:AT5G45120.1,TrEMBL:B9HQ19,TrEMBL:B9SD00,TrEMBL:F6HHB9;Derives_from=GSCOCT00006217001;Name=Cc01_g08480;Ontology_term=CC_evidence_code:ISS,GO:0004190,GO:0006508,CC_EC_number:missing_EC_number,PRODUCT:Putative Aspartic proteinase nepenthesin-1,CC_functional_completeness:fragment,CC_gene:nep1,CC_gene:nep2,CC_gene:ASPG1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00006217001~ Putative Aspartic proteinase nepenthesin-1~ nep1~ fragment;original_location=9375..10793;owner=coffea | |
| 10756 chr1 manual_curation exon 27018618 27020275 . + . Parent=GSCOCT00006217001 | |
| 10757 chr1 manual_curation CDS 27018618 27020036 . + 0 Parent=GSCOCT00006217001 | |
| 10758 chr1 manual_curation gene 27023222 27030436 . + . ID=GSCOCG00006218001;Name=Cc01_g08490 | |
| 10759 chr1 manual_curation mRNA 27023222 27030436 . + . ID=GSCOCT00006218001;Parent=GSCOCG00006218001;Name=Cc01_g08490 | |
| 10760 chr1 manual_curation polypeptide 27023268 27030436 . + . ID=GSCOCP00006218001;Dbxref=TAIR:AT2G20210.1,TrEMBL:B9S586,TrEMBL:F4IUG1,TrEMBL:I1N9Y2;Derives_from=GSCOCT00006218001;Name=Cc01_g08490;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative RNI-like superfamily protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00006218001~ Putative RNI-like superfamily protein~ unknown_gene~ fragment;original_location=join(14025..14088%2C14196..14307%2C15018..15086%2C15235..15396%2C15493..15566%2C16292..16394%2C16862..16904%2C18441..18503%2C19086..19315%2C20219..20339%2C20429..20532%2C20772..20885%2C20962..21193);owner=coffea | |
| 10761 chr1 manual_curation exon 27023222 27023331 . + . Parent=GSCOCT00006218001 | |
| 10762 chr1 manual_curation exon 27023439 27023550 . + . Parent=GSCOCT00006218001 | |
| 10763 chr1 manual_curation exon 27024261 27024329 . + . Parent=GSCOCT00006218001 | |
| 10764 chr1 manual_curation exon 27024478 27024639 . + . Parent=GSCOCT00006218001 | |
| 10765 chr1 manual_curation exon 27024736 27024809 . + . Parent=GSCOCT00006218001 | |
| 10766 chr1 manual_curation exon 27025535 27025637 . + . Parent=GSCOCT00006218001 | |
| 10767 chr1 manual_curation exon 27026105 27026147 . + . Parent=GSCOCT00006218001 | |
| 10768 chr1 manual_curation exon 27027684 27027746 . + . Parent=GSCOCT00006218001 | |
| 10769 chr1 manual_curation exon 27028329 27028558 . + . Parent=GSCOCT00006218001 | |
| 10770 chr1 manual_curation exon 27029462 27029582 . + . Parent=GSCOCT00006218001 | |
| 10771 chr1 manual_curation exon 27029672 27029775 . + . Parent=GSCOCT00006218001 | |
| 10772 chr1 manual_curation exon 27030015 27030128 . + . Parent=GSCOCT00006218001 | |
| 10773 chr1 manual_curation exon 27030205 27030436 . + . Parent=GSCOCT00006218001 | |
| 10774 chr1 manual_curation CDS 27023268 27023331 . + 0 Parent=GSCOCT00006218001 | |
| 10775 chr1 manual_curation CDS 27023439 27023550 . + 1 Parent=GSCOCT00006218001 | |
| 10776 chr1 manual_curation CDS 27024261 27024329 . + 2 Parent=GSCOCT00006218001 | |
| 10777 chr1 manual_curation CDS 27024478 27024639 . + 2 Parent=GSCOCT00006218001 | |
| 10778 chr1 manual_curation CDS 27024736 27024809 . + 2 Parent=GSCOCT00006218001 | |
| 10779 chr1 manual_curation CDS 27025535 27025637 . + 1 Parent=GSCOCT00006218001 | |
| 10780 chr1 manual_curation CDS 27026105 27026147 . + 2 Parent=GSCOCT00006218001 | |
| 10781 chr1 manual_curation CDS 27027684 27027746 . + 0 Parent=GSCOCT00006218001 | |
| 10782 chr1 manual_curation CDS 27028329 27028558 . + 0 Parent=GSCOCT00006218001 | |
| 10783 chr1 manual_curation CDS 27029462 27029582 . + 2 Parent=GSCOCT00006218001 | |
| 10784 chr1 manual_curation CDS 27029672 27029775 . + 0 Parent=GSCOCT00006218001 | |
| 10785 chr1 manual_curation CDS 27030015 27030128 . + 2 Parent=GSCOCT00006218001 | |
| 10786 chr1 manual_curation CDS 27030205 27030436 . + 2 Parent=GSCOCT00006218001 | |
| 10787 chr1 manual_curation gene 27032839 27035797 . + . ID=GSCOCG00023876001;Name=Cc01_g08500 | |
| 10788 chr1 manual_curation mRNA 27032839 27035797 . + . ID=GSCOCT00023876001;Parent=GSCOCG00023876001;Name=Cc01_g08500 | |
| 10789 chr1 manual_curation polypeptide 27032999 27035463 . + . ID=GSCOCP00023876001;Dbxref=InterPro:IPR020966,PFAM:PF11744,SwissProt:Q9SJE8,SwissProt:Q9SJE9,SwissProt:Q9XIN1,TAIR:AT1G08430.1,TAIR:AT1G08440.1,TAIR:AT2G27240.1,TrEMBL:B9HQ62,TrEMBL:B9HQ63,TrEMBL:D7T1P6;Derives_from=GSCOCT00023876001;Name=Cc01_g08500;Ontology_term=CC_evidence_code:ISS,GO:0010044,CC_EC_number:missing_EC_number,PRODUCT:Aluminum-activated malate transporter 2,CC_functional_completeness:fragment,CC_gene:ALMT2,CC_gene:ALMT1,CC_gene:ALMT7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023876001~ Aluminum-activated malate transporter 2~ ALMT2~ fragment;original_location=join(1884..2166%2C2269..2412%2C2532..2804%2C2905..3017%2C3776..4348);owner=coffea | |
| 10790 chr1 manual_curation exon 27032839 27033281 . + . Parent=GSCOCT00023876001 | |
| 10791 chr1 manual_curation exon 27033384 27033527 . + . Parent=GSCOCT00023876001 | |
| 10792 chr1 manual_curation exon 27033647 27033919 . + . Parent=GSCOCT00023876001 | |
| 10793 chr1 manual_curation exon 27034020 27034132 . + . Parent=GSCOCT00023876001 | |
| 10794 chr1 manual_curation exon 27034891 27035797 . + . Parent=GSCOCT00023876001 | |
| 10795 chr1 manual_curation CDS 27032999 27033281 . + 0 Parent=GSCOCT00023876001 | |
| 10796 chr1 manual_curation CDS 27033384 27033527 . + 1 Parent=GSCOCT00023876001 | |
| 10797 chr1 manual_curation CDS 27033647 27033919 . + 1 Parent=GSCOCT00023876001 | |
| 10798 chr1 manual_curation CDS 27034020 27034132 . + 1 Parent=GSCOCT00023876001 | |
| 10799 chr1 manual_curation CDS 27034891 27035463 . + 0 Parent=GSCOCT00023876001 | |
| 10800 chr1 manual_curation gene 27036321 27040170 . + . ID=GSCOCG00023877001;Name=Cc01_g08510 | |
| 10801 chr1 manual_curation mRNA 27036321 27040170 . + . ID=GSCOCT00023877001;Parent=GSCOCG00023877001;Name=Cc01_g08510 | |
| 10802 chr1 manual_curation polypeptide 27036509 27039159 . + . ID=GSCOCP00023877001;Dbxref=GENE3D:G3DSA:3.40.800.20,InterPro:IPR000286,PANTHER:PTHR10625,PFAM:PF00850,PRINTS:PR01270,SwissProt:O30107,SwissProt:Q70I53,SwissProt:Q94EJ2,TAIR:AT1G08460.1,TAIR:AT5G61060.2,TAIR:AT5G61070.1,TrEMBL:B7FIW0,TrEMBL:D7TCX1,TrEMBL:Q2HSH7;Derives_from=GSCOCT00023877001;Name=Cc01_g08510;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Histone deacetylase 8,CC_functional_completeness:complete,CC_gene:HDA8,CC_gene:AF_0130,CC_gene:hdaH;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023877001~ Histone deacetylase 8~ HDA8~ complete;original_location=join(5394..5556%2C6566..7146%2C7751..8044);owner=coffea | |
| 10803 chr1 manual_curation exon 27036321 27036671 . + . Parent=GSCOCT00023877001 | |
| 10804 chr1 manual_curation exon 27037681 27038261 . + . Parent=GSCOCT00023877001 | |
| 10805 chr1 manual_curation exon 27038866 27040170 . + . Parent=GSCOCT00023877001 | |
| 10806 chr1 manual_curation CDS 27036509 27036671 . + 0 Parent=GSCOCT00023877001 | |
| 10807 chr1 manual_curation CDS 27037681 27038261 . + 1 Parent=GSCOCT00023877001 | |
| 10808 chr1 manual_curation CDS 27038866 27039159 . + 0 Parent=GSCOCT00023877001 | |
| 10809 chr1 manual_curation gene 27049933 27054627 . + . ID=GSCOCG00023878001;Name=Cc01_g08520 | |
| 10810 chr1 manual_curation mRNA 27049933 27054627 . + . ID=GSCOCT00023878001;Parent=GSCOCG00023878001;Name=Cc01_g08520 | |
| 10811 chr1 manual_curation polypeptide 27050325 27053404 . + . ID=GSCOCP00023878001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:P43298,SwissProt:Q9LJF3,SwissProt:Q9ZWC8,TAIR:AT1G66150.1,TAIR:AT2G01820.1,TAIR:AT3G23750.1,TrEMBL:B9GHZ6,TrEMBL:B9H9A6,TrEMBL:F6HKS3;Derives_from=GSCOCT00023878001;Name=Cc01_g08520;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable receptor protein kinase TMK1,CC_functional_completeness:complete,CC_gene:TMK1,CC_gene:BRL3,CC_gene:BRL1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023878001~ Putative Probable receptor protein kinase TMK1~ TMK1~ complete;original_location=join(19210..20589%2C20734..21607%2C21787..22289);owner=coffea | |
| 10812 chr1 manual_curation exon 27049933 27051704 . + . Parent=GSCOCT00023878001 | |
| 10813 chr1 manual_curation exon 27051849 27052722 . + . Parent=GSCOCT00023878001 | |
| 10814 chr1 manual_curation exon 27052902 27054627 . + . Parent=GSCOCT00023878001 | |
| 10815 chr1 manual_curation CDS 27050325 27051704 . + 0 Parent=GSCOCT00023878001 | |
| 10816 chr1 manual_curation CDS 27051849 27052722 . + 0 Parent=GSCOCT00023878001 | |
| 10817 chr1 manual_curation CDS 27052902 27053404 . + 1 Parent=GSCOCT00023878001 | |
| 10818 chr1 manual_curation gene 27055919 27057502 . + . ID=GSCOCG00023879001;Name=Cc01_g08530 | |
| 10819 chr1 manual_curation mRNA 27055919 27057502 . + . ID=GSCOCT00023879001;Parent=GSCOCG00023879001;Name=Cc01_g08530 | |
| 10820 chr1 manual_curation polypeptide 27055919 27057502 . + . ID=GSCOCP00023879001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:O82380,SwissProt:Q9LUJ2,SwissProt:Q9MA50,TAIR:AT1G05750.1,TAIR:AT2G29760.1,TAIR:AT3G22690.1,TIGRFAMs:TIGR00756,TrEMBL:F6HAB7,TrEMBL:G4XDZ1,TrEMBL:I1M496;Derives_from=GSCOCT00023879001;Name=Cc01_g08530;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At1g05750%2C chloroplastic,CC_functional_completeness:complete,CC_gene:PDE247,CC_gene:PCMP-H33,CC_gene:PCMP-H56;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023879001~ Pentatricopeptide repeat-containing protein At1g05750%2C chloroplastic~ PDE247~ complete;original_location=24804..26387;owner=coffea | |
| 10821 chr1 manual_curation exon 27055919 27057502 . + . Parent=GSCOCT00023879001 | |
| 10822 chr1 manual_curation CDS 27055919 27057502 . + 0 Parent=GSCOCT00023879001 | |
| 10823 chr1 manual_curation gene 27067206 27070532 . - . ID=GSCOCG00023882001;Name=Cc01_g08540 | |
| 10824 chr1 manual_curation mRNA 27067206 27070532 . - . ID=GSCOCT00023882001;Parent=GSCOCG00023882001;Name=Cc01_g08540 | |
| 10825 chr1 manual_curation polypeptide 27067206 27070141 . - . ID=GSCOCP00023882001;Dbxref=InterPro:IPR001327,InterPro:IPR013027,PFAM:PF00070,PFAM:PF07992,PRINTS:PR00368,SwissProt:B5FXE5,SwissProt:Q54NS8,SwissProt:Q54NS9,TAIR:AT3G44190.1,TAIR:AT5G22140.1,TrEMBL:B9GHZ7,TrEMBL:Q60D44,TrEMBL:Q60D61;Derives_from=GSCOCT00023882001;Name=Cc01_g08540;Ontology_term=CC_evidence_code:ISS,GO:0016491,GO:0050660,GO:0055114,CC_EC_number:1.6.99.3,PRODUCT:Putative Apoptosis-inducing factor homolog A,CC_functional_completeness:complete,CC_gene:aifA,CC_gene:aifB,CC_gene:AIFM2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023882001~ Putative Apoptosis-inducing factor homolog A~ aifA~ complete;original_location=complement(join(38899..39026%2C38401..38657%2C37135..37586%2C36091..36363));owner=coffea | |
| 10826 chr1 manual_curation exon 27067206 27067478 . - . Parent=GSCOCT00023882001 | |
| 10827 chr1 manual_curation exon 27068250 27068701 . - . Parent=GSCOCT00023882001 | |
| 10828 chr1 manual_curation exon 27069516 27069772 . - . Parent=GSCOCT00023882001 | |
| 10829 chr1 manual_curation exon 27070014 27070532 . - . Parent=GSCOCT00023882001 | |
| 10830 chr1 manual_curation CDS 27067206 27067478 . - 0 Parent=GSCOCT00023882001 | |
| 10831 chr1 manual_curation CDS 27068250 27068701 . - 1 Parent=GSCOCT00023882001 | |
| 10832 chr1 manual_curation CDS 27069516 27069772 . - 2 Parent=GSCOCT00023882001 | |
| 10833 chr1 manual_curation CDS 27070014 27070141 . - 0 Parent=GSCOCT00023882001 | |
| 10834 chr1 manual_curation gene 27078382 27087802 . + . ID=GSCOCG00023883001;Name=Cc01_g08550 | |
| 10835 chr1 manual_curation mRNA 27078382 27087802 . + . ID=GSCOCT00023883001;Parent=GSCOCG00023883001;Name=Cc01_g08550 | |
| 10836 chr1 manual_curation polypeptide 27078872 27087367 . + . ID=GSCOCP00023883001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q0WPH8,SwissProt:Q60DG4,SwissProt:Q94CU5,TAIR:AT3G04810.1,TAIR:AT3G20860.1,TAIR:AT3G44200.1,TrEMBL:A5BFG7,TrEMBL:B9SD11,TrEMBL:F6HAB5;Derives_from=GSCOCT00023883001;Name=Cc01_g08550;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.1,PRODUCT:Serine/threonine-protein kinase Nek5,CC_functional_completeness:complete,CC_gene:NEK5,CC_gene:NEK4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023883001~ Serine/threonine-protein kinase Nek5~ NEK5~ complete;original_location=join(47757..47854%2C47967..48033%2C48286..48351%2C48445..48491%2C48591..48636%2C48842..48922%2C49009..49051%2C49149..49198%2C49572..49653%2C50397..50446%2C53212..53285%2C53869..53920%2C54002..54646%2C54720..55273%2C55364..56252);owner=coffea | |
| 10837 chr1 manual_curation exon 27078382 27078969 . + . Parent=GSCOCT00023883001 | |
| 10838 chr1 manual_curation exon 27079082 27079148 . + . Parent=GSCOCT00023883001 | |
| 10839 chr1 manual_curation exon 27079401 27079466 . + . Parent=GSCOCT00023883001 | |
| 10840 chr1 manual_curation exon 27079560 27079606 . + . Parent=GSCOCT00023883001 | |
| 10841 chr1 manual_curation exon 27079706 27079751 . + . Parent=GSCOCT00023883001 | |
| 10842 chr1 manual_curation exon 27079957 27080037 . + . Parent=GSCOCT00023883001 | |
| 10843 chr1 manual_curation exon 27080124 27080166 . + . Parent=GSCOCT00023883001 | |
| 10844 chr1 manual_curation exon 27080264 27080313 . + . Parent=GSCOCT00023883001 | |
| 10845 chr1 manual_curation exon 27080687 27080768 . + . Parent=GSCOCT00023883001 | |
| 10846 chr1 manual_curation exon 27081512 27081561 . + . Parent=GSCOCT00023883001 | |
| 10847 chr1 manual_curation exon 27084327 27084400 . + . Parent=GSCOCT00023883001 | |
| 10848 chr1 manual_curation exon 27084984 27085035 . + . Parent=GSCOCT00023883001 | |
| 10849 chr1 manual_curation exon 27085117 27085761 . + . Parent=GSCOCT00023883001 | |
| 10850 chr1 manual_curation exon 27085835 27086388 . + . Parent=GSCOCT00023883001 | |
| 10851 chr1 manual_curation exon 27086479 27087802 . + . Parent=GSCOCT00023883001 | |
| 10852 chr1 manual_curation CDS 27078872 27078969 . + 0 Parent=GSCOCT00023883001 | |
| 10853 chr1 manual_curation CDS 27079082 27079148 . + 2 Parent=GSCOCT00023883001 | |
| 10854 chr1 manual_curation CDS 27079401 27079466 . + 0 Parent=GSCOCT00023883001 | |
| 10855 chr1 manual_curation CDS 27079560 27079606 . + 0 Parent=GSCOCT00023883001 | |
| 10856 chr1 manual_curation CDS 27079706 27079751 . + 2 Parent=GSCOCT00023883001 | |
| 10857 chr1 manual_curation CDS 27079957 27080037 . + 0 Parent=GSCOCT00023883001 | |
| 10858 chr1 manual_curation CDS 27080124 27080166 . + 0 Parent=GSCOCT00023883001 | |
| 10859 chr1 manual_curation CDS 27080264 27080313 . + 1 Parent=GSCOCT00023883001 | |
| 10860 chr1 manual_curation CDS 27080687 27080768 . + 0 Parent=GSCOCT00023883001 | |
| 10861 chr1 manual_curation CDS 27081512 27081561 . + 1 Parent=GSCOCT00023883001 | |
| 10862 chr1 manual_curation CDS 27084327 27084400 . + 0 Parent=GSCOCT00023883001 | |
| 10863 chr1 manual_curation CDS 27084984 27085035 . + 2 Parent=GSCOCT00023883001 | |
| 10864 chr1 manual_curation CDS 27085117 27085761 . + 0 Parent=GSCOCT00023883001 | |
| 10865 chr1 manual_curation CDS 27085835 27086388 . + 0 Parent=GSCOCT00023883001 | |
| 10866 chr1 manual_curation CDS 27086479 27087367 . + 2 Parent=GSCOCT00023883001 | |
| 10867 chr1 manual_curation gene 27093469 27094600 . + . ID=GSCOCG00023884001;Name=Cc01_g08560 | |
| 10868 chr1 manual_curation mRNA 27093469 27094600 . + . ID=GSCOCT00023884001;Parent=GSCOCG00023884001;Name=Cc01_g08560 | |
| 10869 chr1 manual_curation polypeptide 27093675 27094337 . + . ID=GSCOCP00023884001;Dbxref=InterPro:IPR004864,PFAM:PF03168;Derives_from=GSCOCT00023884001;Name=Cc01_g08560;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023884001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=62560..63222;owner=coffea | |
| 10870 chr1 manual_curation exon 27093469 27094600 . + . Parent=GSCOCT00023884001 | |
| 10871 chr1 manual_curation CDS 27093675 27094337 . + 0 Parent=GSCOCT00023884001 | |
| 10872 chr1 manual_curation gene 27130212 27131575 . + . ID=GSCOCG00023885001;Name=Cc01_g08570 | |
| 10873 chr1 manual_curation mRNA 27130212 27131575 . + . ID=GSCOCT00023885001;Parent=GSCOCG00023885001;Name=Cc01_g08570 | |
| 10874 chr1 manual_curation polypeptide 27130313 27131068 . + . ID=GSCOCP00023885001;Dbxref=InterPro:IPR004864,PFAM:PF03168,SwissProt:Q8VZ13,TAIR:AT1G65690.1,TAIR:AT2G27260.1,TAIR:AT3G52460.1,TrEMBL:B9GI00,TrEMBL:B9SD03,TrEMBL:F6HHB7;Derives_from=GSCOCT00023885001;Name=Cc01_g08570;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family,CC_functional_completeness:complete,CC_gene:At1g08160;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023885001~ Putative Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family~ At1g08160~ complete;original_location=99198..99953;owner=coffea | |
| 10875 chr1 manual_curation exon 27130212 27131575 . + . Parent=GSCOCT00023885001 | |
| 10876 chr1 manual_curation CDS 27130313 27131068 . + 0 Parent=GSCOCT00023885001 | |
| 10877 chr1 manual_curation gene 27140750 27141923 . + . ID=GSCOCG00023887001;Name=Cc01_g08580 | |
| 10878 chr1 manual_curation mRNA 27140750 27141923 . + . ID=GSCOCT00023887001;Parent=GSCOCG00023887001;Name=Cc01_g08580 | |
| 10879 chr1 manual_curation polypeptide 27141011 27141637 . + . ID=GSCOCP00023887001;Dbxref=InterPro:IPR004864,PFAM:PF03168,TAIR:AT3G11660.1,TAIR:AT3G44220.1,TAIR:AT3G52470.1,TrEMBL:A5ACZ0,TrEMBL:B9T2S2,TrEMBL:D7TCP0;Derives_from=GSCOCT00023887001;Name=Cc01_g08580;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023887001~ Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family~ unknown_gene~ complete;original_location=109896..110522;owner=coffea | |
| 10880 chr1 manual_curation exon 27140750 27141923 . + . Parent=GSCOCT00023887001 | |
| 10881 chr1 manual_curation CDS 27141011 27141637 . + 0 Parent=GSCOCT00023887001 | |
| 10882 chr1 manual_curation gene 27170389 27177756 . + . ID=GSCOCG00023889001;Name=Cc01_g08590 | |
| 10883 chr1 manual_curation mRNA 27170389 27177756 . + . ID=GSCOCT00023889001;Parent=GSCOCG00023889001;Name=Cc01_g08590 | |
| 10884 chr1 manual_curation polypeptide 27170455 27177243 . + . ID=GSCOCP00023889001;Dbxref=InterPro:IPR004859,InterPro:IPR017151,PFAM:PF03159,PIR:PIRSF037239,SwissProt:Q9FQ02,SwissProt:Q9FQ03,SwissProt:Q9FQ04,TAIR:AT1G54490.1,TAIR:AT1G75660.1,TAIR:AT5G42540.2,TrEMBL:B9H4V3,TrEMBL:B9SD01,TrEMBL:G7JH90;Derives_from=GSCOCT00023889001;Name=Cc01_g08590;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0004527,GO:0004534,GO:0005622,GO:0005634,CC_EC_number:missing_EC_number,PRODUCT:Putative 5'-3' exoribonuclease 3,CC_functional_completeness:complete,CC_gene:XRN3,CC_gene:XRN2,CC_gene:XRN4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023889001~ Putative 5'-3' exoribonuclease 3~ XRN3~ complete;original_location=join(139340..139495%2C139768..139873%2C140000..140076%2C140737..140928%2C141050..141169%2C141267..141329%2C141466..141570%2C141714..141854%2C141991..142161%2C142249..142326%2C142420..142569%2C142674..142823%2C142955..143050%2C143137..143229%2C143508..143578%2C143658..143786%2C143888..143964%2C144057..144097%2C144220..144294%2C144573..144718%2C145157..145207%2C145292..145367%2C145641..146033%2C146102..146128);owner=coffea | |
| 10885 chr1 manual_curation exon 27170389 27170610 . + . Parent=GSCOCT00023889001 | |
| 10886 chr1 manual_curation exon 27170883 27170988 . + . Parent=GSCOCT00023889001 | |
| 10887 chr1 manual_curation exon 27171115 27171191 . + . Parent=GSCOCT00023889001 | |
| 10888 chr1 manual_curation exon 27171852 27172043 . + . Parent=GSCOCT00023889001 | |
| 10889 chr1 manual_curation exon 27172165 27172284 . + . Parent=GSCOCT00023889001 | |
| 10890 chr1 manual_curation exon 27172382 27172444 . + . Parent=GSCOCT00023889001 | |
| 10891 chr1 manual_curation exon 27172581 27172685 . + . Parent=GSCOCT00023889001 | |
| 10892 chr1 manual_curation exon 27172829 27172969 . + . Parent=GSCOCT00023889001 | |
| 10893 chr1 manual_curation exon 27173106 27173276 . + . Parent=GSCOCT00023889001 | |
| 10894 chr1 manual_curation exon 27173364 27173441 . + . Parent=GSCOCT00023889001 | |
| 10895 chr1 manual_curation exon 27173535 27173684 . + . Parent=GSCOCT00023889001 | |
| 10896 chr1 manual_curation exon 27173789 27173938 . + . Parent=GSCOCT00023889001 | |
| 10897 chr1 manual_curation exon 27174070 27174165 . + . Parent=GSCOCT00023889001 | |
| 10898 chr1 manual_curation exon 27174252 27174344 . + . Parent=GSCOCT00023889001 | |
| 10899 chr1 manual_curation exon 27174623 27174693 . + . Parent=GSCOCT00023889001 | |
| 10900 chr1 manual_curation exon 27174773 27174901 . + . Parent=GSCOCT00023889001 | |
| 10901 chr1 manual_curation exon 27175003 27175079 . + . Parent=GSCOCT00023889001 | |
| 10902 chr1 manual_curation exon 27175172 27175212 . + . Parent=GSCOCT00023889001 | |
| 10903 chr1 manual_curation exon 27175335 27175409 . + . Parent=GSCOCT00023889001 | |
| 10904 chr1 manual_curation exon 27175688 27175833 . + . Parent=GSCOCT00023889001 | |
| 10905 chr1 manual_curation exon 27176272 27176322 . + . Parent=GSCOCT00023889001 | |
| 10906 chr1 manual_curation exon 27176407 27176482 . + . Parent=GSCOCT00023889001 | |
| 10907 chr1 manual_curation exon 27176756 27177148 . + . Parent=GSCOCT00023889001 | |
| 10908 chr1 manual_curation exon 27177217 27177756 . + . Parent=GSCOCT00023889001 | |
| 10909 chr1 manual_curation CDS 27170455 27170610 . + 0 Parent=GSCOCT00023889001 | |
| 10910 chr1 manual_curation CDS 27170883 27170988 . + 0 Parent=GSCOCT00023889001 | |
| 10911 chr1 manual_curation CDS 27171115 27171191 . + 1 Parent=GSCOCT00023889001 | |
| 10912 chr1 manual_curation CDS 27171852 27172043 . + 0 Parent=GSCOCT00023889001 | |
| 10913 chr1 manual_curation CDS 27172165 27172284 . + 0 Parent=GSCOCT00023889001 | |
| 10914 chr1 manual_curation CDS 27172382 27172444 . + 0 Parent=GSCOCT00023889001 | |
| 10915 chr1 manual_curation CDS 27172581 27172685 . + 0 Parent=GSCOCT00023889001 | |
| 10916 chr1 manual_curation CDS 27172829 27172969 . + 0 Parent=GSCOCT00023889001 | |
| 10917 chr1 manual_curation CDS 27173106 27173276 . + 0 Parent=GSCOCT00023889001 | |
| 10918 chr1 manual_curation CDS 27173364 27173441 . + 0 Parent=GSCOCT00023889001 | |
| 10919 chr1 manual_curation CDS 27173535 27173684 . + 0 Parent=GSCOCT00023889001 | |
| 10920 chr1 manual_curation CDS 27173789 27173938 . + 0 Parent=GSCOCT00023889001 | |
| 10921 chr1 manual_curation CDS 27174070 27174165 . + 0 Parent=GSCOCT00023889001 | |
| 10922 chr1 manual_curation CDS 27174252 27174344 . + 0 Parent=GSCOCT00023889001 | |
| 10923 chr1 manual_curation CDS 27174623 27174693 . + 0 Parent=GSCOCT00023889001 | |
| 10924 chr1 manual_curation CDS 27174773 27174901 . + 2 Parent=GSCOCT00023889001 | |
| 10925 chr1 manual_curation CDS 27175003 27175079 . + 2 Parent=GSCOCT00023889001 | |
| 10926 chr1 manual_curation CDS 27175172 27175212 . + 1 Parent=GSCOCT00023889001 | |
| 10927 chr1 manual_curation CDS 27175335 27175409 . + 0 Parent=GSCOCT00023889001 | |
| 10928 chr1 manual_curation CDS 27175688 27175833 . + 0 Parent=GSCOCT00023889001 | |
| 10929 chr1 manual_curation CDS 27176272 27176322 . + 2 Parent=GSCOCT00023889001 | |
| 10930 chr1 manual_curation CDS 27176407 27176482 . + 2 Parent=GSCOCT00023889001 | |
| 10931 chr1 manual_curation CDS 27176756 27177148 . + 0 Parent=GSCOCT00023889001 | |
| 10932 chr1 manual_curation CDS 27177217 27177243 . + 0 Parent=GSCOCT00023889001 | |
| 10933 chr1 manual_curation gene 27241258 27244154 . + . ID=GSCOCG00023891001;Name=Cc01_g08600 | |
| 10934 chr1 manual_curation mRNA 27241258 27244154 . + . ID=GSCOCT00023891001;Parent=GSCOCG00023891001;Name=Cc01_g08600 | |
| 10935 chr1 manual_curation polypeptide 27243615 27243857 . + . ID=GSCOCP00023891001;Dbxref=TAIR:AT5G22210.1,TrEMBL:B9MYV5,TrEMBL:B9SCZ7,TrEMBL:D7TCP5;Derives_from=GSCOCT00023891001;Name=Cc01_g08600;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023891001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: N-terminal protein myristoylation%3B LOCATED IN: cellular_component unknown%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ unknown_gene~ complete;original_location=212500..212742;owner=coffea | |
| 10936 chr1 manual_curation exon 27241258 27241401 . + . Parent=GSCOCT00023891001 | |
| 10937 chr1 manual_curation exon 27243608 27244154 . + . Parent=GSCOCT00023891001 | |
| 10938 chr1 manual_curation CDS 27243615 27243857 . + 0 Parent=GSCOCT00023891001 | |
| 10939 chr1 manual_curation gene 27250258 27256906 . + . ID=GSCOCG00023892001;Name=Cc01_g08610 | |
| 10940 chr1 manual_curation mRNA 27250258 27256906 . + . ID=GSCOCT00023892001;Parent=GSCOCG00023892001;Name=Cc01_g08610 | |
| 10941 chr1 manual_curation polypeptide 27250608 27256467 . + . ID=GSCOCP00023892001;Dbxref=GENE3D:G3DSA:1.10.10.10,InterPro:IPR003316,InterPro:IPR011991,InterPro:IPR015633,PANTHER:PTHR12081,PFAM:PF02319,SwissProt:Q9FNY0,SwissProt:Q9FV70,SwissProt:Q9FV71,TAIR:AT1G47870.1,TAIR:AT2G36010.2,TAIR:AT5G22220.2,TrEMBL:D7TCP6,TrEMBL:Q9FNS0,TrEMBL:Q9SSZ3;Derives_from=GSCOCT00023892001;Name=Cc01_g08610;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0005667,CC_EC_number:missing_EC_number,PRODUCT:Transcription factor E2FB,CC_functional_completeness:complete,CC_gene:E2FB,CC_gene:E2FA,CC_gene:E2FC;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023892001~ Transcription factor E2FB~ E2FB~ complete;original_location=join(219493..219660%2C221650..221842%2C221995..222054%2C222235..222320%2C222398..222486%2C222592..222646%2C223514..223566%2C223658..223708%2C223835..223883%2C223974..224039%2C224144..224220%2C224462..224684%2C225042..225108%2C225219..225352);owner=coffea | |
| 10942 chr1 manual_curation exon 27250258 27250775 . + . Parent=GSCOCT00023892001 | |
| 10943 chr1 manual_curation exon 27252765 27252957 . + . Parent=GSCOCT00023892001 | |
| 10944 chr1 manual_curation exon 27253110 27253169 . + . Parent=GSCOCT00023892001 | |
| 10945 chr1 manual_curation exon 27253350 27253435 . + . Parent=GSCOCT00023892001 | |
| 10946 chr1 manual_curation exon 27253513 27253601 . + . Parent=GSCOCT00023892001 | |
| 10947 chr1 manual_curation exon 27253707 27253761 . + . Parent=GSCOCT00023892001 | |
| 10948 chr1 manual_curation exon 27254629 27254681 . + . Parent=GSCOCT00023892001 | |
| 10949 chr1 manual_curation exon 27254773 27254823 . + . Parent=GSCOCT00023892001 | |
| 10950 chr1 manual_curation exon 27254950 27254998 . + . Parent=GSCOCT00023892001 | |
| 10951 chr1 manual_curation exon 27255089 27255154 . + . Parent=GSCOCT00023892001 | |
| 10952 chr1 manual_curation exon 27255259 27255335 . + . Parent=GSCOCT00023892001 | |
| 10953 chr1 manual_curation exon 27255577 27255799 . + . Parent=GSCOCT00023892001 | |
| 10954 chr1 manual_curation exon 27256157 27256223 . + . Parent=GSCOCT00023892001 | |
| 10955 chr1 manual_curation exon 27256334 27256906 . + . Parent=GSCOCT00023892001 | |
| 10956 chr1 manual_curation CDS 27250608 27250775 . + 0 Parent=GSCOCT00023892001 | |
| 10957 chr1 manual_curation CDS 27252765 27252957 . + 0 Parent=GSCOCT00023892001 | |
| 10958 chr1 manual_curation CDS 27253110 27253169 . + 1 Parent=GSCOCT00023892001 | |
| 10959 chr1 manual_curation CDS 27253350 27253435 . + 1 Parent=GSCOCT00023892001 | |
| 10960 chr1 manual_curation CDS 27253513 27253601 . + 0 Parent=GSCOCT00023892001 | |
| 10961 chr1 manual_curation CDS 27253707 27253761 . + 2 Parent=GSCOCT00023892001 | |
| 10962 chr1 manual_curation CDS 27254629 27254681 . + 0 Parent=GSCOCT00023892001 | |
| 10963 chr1 manual_curation CDS 27254773 27254823 . + 2 Parent=GSCOCT00023892001 | |
| 10964 chr1 manual_curation CDS 27254950 27254998 . + 2 Parent=GSCOCT00023892001 | |
| 10965 chr1 manual_curation CDS 27255089 27255154 . + 0 Parent=GSCOCT00023892001 | |
| 10966 chr1 manual_curation CDS 27255259 27255335 . + 0 Parent=GSCOCT00023892001 | |
| 10967 chr1 manual_curation CDS 27255577 27255799 . + 2 Parent=GSCOCT00023892001 | |
| 10968 chr1 manual_curation CDS 27256157 27256223 . + 0 Parent=GSCOCT00023892001 | |
| 10969 chr1 manual_curation CDS 27256334 27256467 . + 1 Parent=GSCOCT00023892001 | |
| 10970 chr1 manual_curation gene 27256992 27258664 . - . ID=GSCOCG00023893001;Name=Cc01_g08620 | |
| 10971 chr1 manual_curation mRNA 27256992 27258664 . - . ID=GSCOCT00023893001;Parent=GSCOCG00023893001;Name=Cc01_g08620 | |
| 10972 chr1 manual_curation polypeptide 27257147 27258530 . - . ID=GSCOCP00023893001;Dbxref=InterPro:IPR009688,PFAM:PF06916,SwissProt:Q96KR6,TAIR:AT2G27290.1,TrEMBL:C6TM76,TrEMBL:I1LKN2,TrEMBL:I1LRK0;Derives_from=GSCOCT00023893001;Name=Cc01_g08620;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF1279),CC_functional_completeness:complete,CC_gene:FAM210B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023893001~ Protein of unknown function (DUF1279)~ FAM210B~ complete;original_location=complement(join(227179..227415%2C226291..226482%2C226032..226190));owner=coffea | |
| 10973 chr1 manual_curation exon 27256992 27257305 . - . Parent=GSCOCT00023893001 | |
| 10974 chr1 manual_curation exon 27257406 27257597 . - . Parent=GSCOCT00023893001 | |
| 10975 chr1 manual_curation exon 27258294 27258664 . - . Parent=GSCOCT00023893001 | |
| 10976 chr1 manual_curation CDS 27257147 27257305 . - 0 Parent=GSCOCT00023893001 | |
| 10977 chr1 manual_curation CDS 27257406 27257597 . - 0 Parent=GSCOCT00023893001 | |
| 10978 chr1 manual_curation CDS 27258294 27258530 . - 0 Parent=GSCOCT00023893001 | |
| 10979 chr1 manual_curation gene 27266593 27267643 . + . ID=GSCOCG00023894001;Name=Cc01_g08630 | |
| 10980 chr1 manual_curation mRNA 27266593 27267643 . + . ID=GSCOCT00023894001;Parent=GSCOCG00023894001;Name=Cc01_g08630 | |
| 10981 chr1 manual_curation polypeptide 27266593 27267156 . + . ID=GSCOCP00023894001;Dbxref=InterPro:IPR006458,PFAM:PF04844,TAIR:AT2G36026.1,TAIR:AT3G52525.1,TAIR:AT5G19650.1,TIGRFAMs:TIGR01568,TrEMBL:B9SCZ4,TrEMBL:F6HKQ7,TrEMBL:I1LTY6;Derives_from=GSCOCT00023894001;Name=Cc01_g08630;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative ovate family protein 6,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023894001~ Putative ovate family protein 6~ unknown_gene~ complete;original_location=join(235478..235680%2C235741..236041);owner=coffea | |
| 10982 chr1 manual_curation exon 27266593 27266795 . + . Parent=GSCOCT00023894001 | |
| 10983 chr1 manual_curation exon 27266856 27267643 . + . Parent=GSCOCT00023894001 | |
| 10984 chr1 manual_curation CDS 27266593 27266795 . + 0 Parent=GSCOCT00023894001 | |
| 10985 chr1 manual_curation CDS 27266856 27267156 . + 2 Parent=GSCOCT00023894001 | |
| 10986 chr1 manual_curation gene 27271180 27272046 . - . ID=GSCOCG00023896001;Name=Cc01_g08640 | |
| 10987 chr1 manual_curation mRNA 27271180 27272046 . - . ID=GSCOCT00023896001;Parent=GSCOCG00023896001;Name=Cc01_g08640 | |
| 10988 chr1 manual_curation polypeptide 27271180 27272046 . - . ID=GSCOCP00023896001;Dbxref=InterPro:IPR006941,InterPro:IPR012337,PFAM:PF04857,SUPERFAMILY:SSF53098,SwissProt:Q9FMS6,SwissProt:Q9LXM2,SwissProt:Q9SKZ2,TAIR:AT2G32070.1,TAIR:AT3G44260.1,TAIR:AT5G22250.1,TrEMBL:A5BID5,TrEMBL:B9MYV0,TrEMBL:F6HHC1;Derives_from=GSCOCT00023896001;Name=Cc01_g08640;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0005634,CC_EC_number:3.1.13.4,PRODUCT:Probable CCR4-associated factor 1 homolog 11,CC_functional_completeness:complete,CC_gene:CAF1-11,CC_gene:CAF1-9,CC_gene:CAF1-7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023896001~ Probable CCR4-associated factor 1 homolog 11~ CAF1-11~ complete;original_location=complement(240065..240931);owner=coffea | |
| 10989 chr1 manual_curation exon 27271180 27272046 . - . Parent=GSCOCT00023896001 | |
| 10990 chr1 manual_curation CDS 27271180 27272046 . - 0 Parent=GSCOCT00023896001 | |
| 10991 chr1 manual_curation gene 27279504 27284059 . - . ID=GSCOCG00023897001;Name=Cc01_g08650 | |
| 10992 chr1 manual_curation mRNA 27279504 27284059 . - . ID=GSCOCT00023897001;Parent=GSCOCG00023897001;Name=Cc01_g08650 | |
| 10993 chr1 manual_curation polypeptide 27279638 27283898 . - . ID=GSCOCP00023897001;Dbxref=GENE3D:G3DSA:3.10.110.10,InterPro:IPR000608,InterPro:IPR016135,PFAM:PF00179,PROFILE:PS50127,SMART:SM00212,SUPERFAMILY:SSF54495,SwissProt:Q93YP0,SwissProt:Q9SJ44,SwissProt:Q9SVD7,TAIR:AT1G23260.1,TAIR:AT2G36060.2,TAIR:AT3G52560.4,TrEMBL:A5BID6,TrEMBL:F8RWS9,TrEMBL:I1JGK4;Derives_from=GSCOCT00023897001;Name=Cc01_g08650;Ontology_term=CC_evidence_code:ISS,GO:0019787,GO:0043687,GO:0051246,CC_EC_number:missing_EC_number,PRODUCT:Ubiquitin-conjugating enzyme E2 variant 1C,CC_functional_completeness:complete,CC_gene:UEV1C,CC_gene:UEV1D,CC_gene:UEV1A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023897001~ Ubiquitin-conjugating enzyme E2 variant 1C~ UEV1C~ complete;original_location=complement(join(252747..252783%2C250642..250781%2C249210..249335%2C248523..248663));owner=coffea | |
| 10994 chr1 manual_curation exon 27279504 27279778 . - . Parent=GSCOCT00023897001 | |
| 10995 chr1 manual_curation exon 27280325 27280450 . - . Parent=GSCOCT00023897001 | |
| 10996 chr1 manual_curation exon 27281757 27281896 . - . Parent=GSCOCT00023897001 | |
| 10997 chr1 manual_curation exon 27283862 27284059 . - . Parent=GSCOCT00023897001 | |
| 10998 chr1 manual_curation CDS 27279638 27279778 . - 0 Parent=GSCOCT00023897001 | |
| 10999 chr1 manual_curation CDS 27280325 27280450 . - 0 Parent=GSCOCT00023897001 | |
| 11000 chr1 manual_curation CDS 27281757 27281896 . - 1 Parent=GSCOCT00023897001 | |
| 11001 chr1 manual_curation CDS 27283862 27283898 . - 0 Parent=GSCOCT00023897001 | |
| 11002 chr1 manual_curation gene 27286364 27290680 . - . ID=GSCOCG00023898001;Name=Cc01_g08660 | |
| 11003 chr1 manual_curation mRNA 27286364 27290680 . - . ID=GSCOCT00023898001;Parent=GSCOCG00023898001;Name=Cc01_g08660 | |
| 11004 chr1 manual_curation polypeptide 27286818 27289720 . - . ID=GSCOCP00023898001;Dbxref=TAIR:AT3G44280.1,TAIR:AT5G06265.1,TAIR:AT5G22280.3,TrEMBL:B9SVZ8,TrEMBL:D7M0V8,TrEMBL:Q9FMS3;Derives_from=GSCOCT00023898001;Name=Cc01_g08660;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:hyaluronan mediated motility receptor-related,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023898001~ hyaluronan mediated motility receptor-related~ unknown_gene~ complete;original_location=complement(join(258447..258605%2C255703..255849));owner=coffea | |
| 11005 chr1 manual_curation exon 27290322 27290680 . - . Parent=GSCOCT00023898001 | |
| 11006 chr1 manual_curation exon 27286364 27286964 . - . Parent=GSCOCT00023898001 | |
| 11007 chr1 manual_curation exon 27289562 27289744 . - . Parent=GSCOCT00023898001 | |
| 11008 chr1 manual_curation CDS 27286818 27286964 . - 0 Parent=GSCOCT00023898001 | |
| 11009 chr1 manual_curation CDS 27289562 27289720 . - 0 Parent=GSCOCT00023898001 | |
| 11010 chr1 manual_curation gene 27292953 27293156 . - . ID=GSCOCG00023899001;Name=Cc01_g08670 | |
| 11011 chr1 manual_curation mRNA 27292953 27293156 . - . ID=GSCOCT00023899001;Parent=GSCOCG00023899001;Name=Cc01_g08670 | |
| 11012 chr1 manual_curation polypeptide 27292953 27293156 . - . ID=GSCOCP00023899001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR002198,InterPro:IPR016040,PANTHER:PTHR19410;Derives_from=GSCOCT00023899001;Name=Cc01_g08670;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,GO:0016491,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023899001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(261838..262041);owner=coffea | |
| 11013 chr1 manual_curation exon 27292953 27293156 . - . Parent=GSCOCT00023899001 | |
| 11014 chr1 manual_curation CDS 27292953 27293156 . - 0 Parent=GSCOCT00023899001 | |
| 11015 chr1 manual_curation gene 27294934 27296241 . - . ID=GSCOCG00023900001;Name=Cc01_g08680 | |
| 11016 chr1 manual_curation mRNA 27294934 27296241 . - . ID=GSCOCT00023900001;Parent=GSCOCG00023900001;Name=Cc01_g08680 | |
| 11017 chr1 manual_curation polypeptide 27295219 27296196 . - . ID=GSCOCP00023900001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR002198,InterPro:IPR002347,InterPro:IPR016040,PANTHER:PTHR19410,PFAM:PF00106,PRINTS:PR00080,PRINTS:PR00081,SwissProt:P50160,SwissProt:Q7FAE1,SwissProt:Q9C826,TAIR:AT1G52340.1,TAIR:AT3G51680.1,TAIR:AT4G03140.1,TrEMBL:B9MX93,TrEMBL:B9MYU5,TrEMBL:B9SCZ0;Derives_from=GSCOCT00023900001;Name=Cc01_g08680;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,GO:0016491,GO:0055114,CC_EC_number:1.1.1.100,PRODUCT:Momilactone A synthase,CC_functional_completeness:complete,CC_gene:Os04g0179200,CC_gene:ABA2,CC_gene:TS2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023900001~ Momilactone A synthase~ Os04g0179200~ complete;original_location=complement(join(265044..265081%2C264104..264884));owner=coffea | |
| 11018 chr1 manual_curation exon 27294934 27295999 . - . Parent=GSCOCT00023900001 | |
| 11019 chr1 manual_curation exon 27296159 27296241 . - . Parent=GSCOCT00023900001 | |
| 11020 chr1 manual_curation CDS 27295219 27295999 . - 2 Parent=GSCOCT00023900001 | |
| 11021 chr1 manual_curation CDS 27296159 27296196 . - 0 Parent=GSCOCT00023900001 | |
| 11022 chr1 manual_curation gene 27305518 27306592 . - . ID=GSCOCG00023901001;Name=Cc01_g08690 | |
| 11023 chr1 manual_curation mRNA 27305518 27306592 . - . ID=GSCOCT00023901001;Parent=GSCOCG00023901001;Name=Cc01_g08690 | |
| 11024 chr1 manual_curation polypeptide 27305518 27306499 . - . ID=GSCOCP00023901001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR002198,InterPro:IPR002347,InterPro:IPR016040,PANTHER:PTHR19410,PFAM:PF00106,PRINTS:PR00080,PRINTS:PR00081,SwissProt:P50160,SwissProt:Q7FAE1,SwissProt:Q9C826,TAIR:AT1G52340.1,TAIR:AT3G51680.1,TAIR:AT4G03140.1,TrEMBL:B9MX93,TrEMBL:B9MYU5,TrEMBL:B9SCZ0;Derives_from=GSCOCT00023901001;Name=Cc01_g08690;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,GO:0016491,GO:0055114,CC_EC_number:1.1.1.100,PRODUCT:Momilactone A synthase,CC_functional_completeness:complete,CC_gene:Os04g0179200,CC_gene:ABA2,CC_gene:TS2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023901001~ Momilactone A synthase~ Os04g0179200~ complete;original_location=complement(join(275347..275384%2C274403..275183));owner=coffea | |
| 11025 chr1 manual_curation exon 27305518 27306298 . - . Parent=GSCOCT00023901001 | |
| 11026 chr1 manual_curation exon 27306462 27306592 . - . Parent=GSCOCT00023901001 | |
| 11027 chr1 manual_curation CDS 27305518 27306298 . - 2 Parent=GSCOCT00023901001 | |
| 11028 chr1 manual_curation CDS 27306462 27306499 . - 0 Parent=GSCOCT00023901001 | |
| 11029 chr1 manual_curation gene 27320214 27321459 . - . ID=GSCOCG00023904001;Name=Cc01_g08700 | |
| 11030 chr1 manual_curation mRNA 27320214 27321459 . - . ID=GSCOCT00023904001;Parent=GSCOCG00023904001;Name=Cc01_g08700 | |
| 11031 chr1 manual_curation polypeptide 27320446 27321414 . - . ID=GSCOCP00023904001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR002198,InterPro:IPR002347,InterPro:IPR016040,PFAM:PF00106,PRINTS:PR00080,PRINTS:PR00081,SwissProt:P50160,SwissProt:Q7FAE1,SwissProt:Q9C826,TAIR:AT1G52340.1,TAIR:AT3G51680.1,TAIR:AT4G03140.1,TrEMBL:B9MX93,TrEMBL:B9MYU5,TrEMBL:B9SCZ0;Derives_from=GSCOCT00023904001;Name=Cc01_g08700;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,GO:0016491,GO:0055114,CC_EC_number:1.1.1.100,PRODUCT:Momilactone A synthase,CC_functional_completeness:complete,CC_gene:Os04g0179200,CC_gene:ABA2,CC_gene:TS2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023904001~ Momilactone A synthase~ Os04g0179200~ complete;original_location=complement(join(290271..290299%2C289331..290111));owner=coffea | |
| 11032 chr1 manual_curation exon 27320214 27321226 . - . Parent=GSCOCT00023904001 | |
| 11033 chr1 manual_curation exon 27321386 27321459 . - . Parent=GSCOCT00023904001 | |
| 11034 chr1 manual_curation CDS 27320446 27321226 . - 2 Parent=GSCOCT00023904001 | |
| 11035 chr1 manual_curation CDS 27321386 27321414 . - 0 Parent=GSCOCT00023904001 | |
| 11036 chr1 manual_curation gene 27327693 27328879 . - . ID=GSCOCG00023905001;Name=Cc01_g08710 | |
| 11037 chr1 manual_curation mRNA 27327693 27328879 . - . ID=GSCOCT00023905001;Parent=GSCOCG00023905001;Name=Cc01_g08710 | |
| 11038 chr1 manual_curation polypeptide 27327928 27328879 . - . ID=GSCOCP00023905001;Dbxref=TrEMBL:B9HQ28,TrEMBL:B9SCY9,TrEMBL:F6HHD1;Derives_from=GSCOCT00023905001;Name=Cc01_g08710;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023905001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(297477..297764%2C296813..297202));owner=coffea | |
| 11039 chr1 manual_curation exon 27327693 27328317 . - . Parent=GSCOCT00023905001 | |
| 11040 chr1 manual_curation exon 27328592 27328879 . - . Parent=GSCOCT00023905001 | |
| 11041 chr1 manual_curation CDS 27327928 27328317 . - 0 Parent=GSCOCT00023905001 | |
| 11042 chr1 manual_curation CDS 27328592 27328879 . - 0 Parent=GSCOCT00023905001 | |
| 11043 chr1 manual_curation gene 27334302 27337266 . - . ID=GSCOCG00023906001;Name=Cc01_g08720 | |
| 11044 chr1 manual_curation mRNA 27334302 27337266 . - . ID=GSCOCT00023906001;Parent=GSCOCG00023906001;Name=Cc01_g08720 | |
| 11045 chr1 manual_curation polypeptide 27334302 27337222 . - . ID=GSCOCP00023906001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR002198,InterPro:IPR002347,InterPro:IPR003441,InterPro:IPR016040,PANTHER:PTHR19410,PFAM:PF00106,PFAM:PF02365,PRINTS:PR00080,PRINTS:PR00081,SUPERFAMILY:SSF101941,SwissProt:P50160,SwissProt:Q7FAE1,SwissProt:Q9C826,TAIR:AT1G52340.1,TAIR:AT3G51680.1,TAIR:AT4G03140.1,TrEMBL:B9MX93,TrEMBL:B9MYU5,TrEMBL:B9SCZ0;Derives_from=GSCOCT00023906001;Name=Cc01_g08720;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003824,GO:0005488,GO:0008152,GO:0016491,GO:0045449,GO:0055114,CC_EC_number:1.1.1.53,PRODUCT:Momilactone A synthase,CC_functional_completeness:modules,CC_gene:Os04g0179200,CC_gene:ABA2,CC_gene:TS2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023906001~ Momilactone A synthase~ Os04g0179200~ modules;original_location=complement(join(306070..306107%2C305156..305910%2C303187..303407));owner=coffea | |
| 11046 chr1 manual_curation exon 27334302 27334522 . - . Parent=GSCOCT00023906001 | |
| 11047 chr1 manual_curation exon 27336271 27337025 . - . Parent=GSCOCT00023906001 | |
| 11048 chr1 manual_curation exon 27337185 27337266 . - . Parent=GSCOCT00023906001 | |
| 11049 chr1 manual_curation CDS 27334302 27334522 . - 1 Parent=GSCOCT00023906001 | |
| 11050 chr1 manual_curation CDS 27336271 27337025 . - 2 Parent=GSCOCT00023906001 | |
| 11051 chr1 manual_curation CDS 27337185 27337222 . - 0 Parent=GSCOCT00023906001 | |
| 11052 chr1 manual_curation gene 27340485 27344130 . - . ID=GSCOCG00023907001;Name=Cc01_g08730 | |
| 11053 chr1 manual_curation mRNA 27340485 27344130 . - . ID=GSCOCT00023907001;Parent=GSCOCG00023907001;Name=Cc01_g08730 | |
| 11054 chr1 manual_curation polypeptide 27340749 27343953 . - . ID=GSCOCP00023907001;Dbxref=InterPro:IPR003441,PFAM:PF02365,PROFILE:PS51005,SUPERFAMILY:SSF101941,SwissProt:Q7GCL7,SwissProt:Q84K00,SwissProt:Q94F58,TAIR:AT2G27300.1,TAIR:AT3G44290.1,TAIR:AT5G22290.1,TrEMBL:A5BXG9,TrEMBL:B9HQ28,TrEMBL:F6HHD1;Derives_from=GSCOCT00023907001;Name=Cc01_g08730;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:NAC089,CC_gene:NAC74,CC_gene:NAC078;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023907001~ Putative uncharacterized protein~ NAC089~ complete;original_location=complement(join(312613..312838%2C310741..310994%2C310342..310635%2C309634..310062));owner=coffea | |
| 11055 chr1 manual_curation exon 27340485 27341177 . - . Parent=GSCOCT00023907001 | |
| 11056 chr1 manual_curation exon 27341457 27341750 . - . Parent=GSCOCT00023907001 | |
| 11057 chr1 manual_curation exon 27341856 27342109 . - . Parent=GSCOCT00023907001 | |
| 11058 chr1 manual_curation exon 27343728 27344130 . - . Parent=GSCOCT00023907001 | |
| 11059 chr1 manual_curation CDS 27340749 27341177 . - 0 Parent=GSCOCT00023907001 | |
| 11060 chr1 manual_curation CDS 27341457 27341750 . - 0 Parent=GSCOCT00023907001 | |
| 11061 chr1 manual_curation CDS 27341856 27342109 . - 1 Parent=GSCOCT00023907001 | |
| 11062 chr1 manual_curation CDS 27343728 27343953 . - 0 Parent=GSCOCT00023907001 | |
| 11063 chr1 manual_curation gene 27346290 27351447 . - . ID=GSCOCG00023909001;Name=Cc01_g08740 | |
| 11064 chr1 manual_curation mRNA 27346290 27351447 . - . ID=GSCOCT00023909001;Parent=GSCOCG00023909001;Name=Cc01_g08740 | |
| 11065 chr1 manual_curation polypeptide 27346290 27351447 . - . ID=GSCOCP00023909001;Dbxref=GENE3D:G3DSA:3.30.890.10,InterPro:IPR001739,InterPro:IPR016177,PFAM:PF01429,PROFILE:PS50982,SMART:SM00391,SUPERFAMILY:SSF54171,SwissProt:Q9LTJ1,SwissProt:Q9SNC0,TAIR:AT3G46580.1,TAIR:AT5G59380.1,TrEMBL:B9HPH2,TrEMBL:D7LN21,TrEMBL:D7MSE3;Derives_from=GSCOCT00023909001;Name=Cc01_g08740;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0005634,CC_EC_number:missing_EC_number,PRODUCT:Putative Methyl-CpG-binding domain-containing protein 6,CC_functional_completeness:complete,CC_gene:MBD6,CC_gene:MBD5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023909001~ Putative Methyl-CpG-binding domain-containing protein 6~ MBD6~ complete;original_location=complement(join(319967..320332%2C315615..315725%2C315175..315462));owner=coffea | |
| 11066 chr1 manual_curation exon 27346290 27346577 . - . Parent=GSCOCT00023909001 | |
| 11067 chr1 manual_curation exon 27346730 27346840 . - . Parent=GSCOCT00023909001 | |
| 11068 chr1 manual_curation exon 27351082 27351447 . - . Parent=GSCOCT00023909001 | |
| 11069 chr1 manual_curation CDS 27346290 27346577 . - 0 Parent=GSCOCT00023909001 | |
| 11070 chr1 manual_curation CDS 27346730 27346840 . - 0 Parent=GSCOCT00023909001 | |
| 11071 chr1 manual_curation CDS 27351082 27351447 . - 0 Parent=GSCOCT00023909001 | |
| 11072 chr1 manual_curation gene 27353807 27356192 . + . ID=GSCOCG00023910001;Name=Cc01_g08750 | |
| 11073 chr1 manual_curation mRNA 27353807 27356192 . + . ID=GSCOCT00023910001;Parent=GSCOCG00023910001;Name=Cc01_g08750 | |
| 11074 chr1 manual_curation polypeptide 27354030 27355985 . + . ID=GSCOCP00023910001;Dbxref=TAIR:AT2G43250.1,TrEMBL:B9MXZ7,TrEMBL:B9P4W3,TrEMBL:B9SUU7;Derives_from=GSCOCT00023910001;Name=Cc01_g08750;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B Has 32 Blast hits to 32 proteins in 11 species,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023910001~ unknown protein%3B Has 32 Blast hits to 32 proteins in 11 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 32%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=322915..324870;owner=coffea | |
| 11075 chr1 manual_curation exon 27353807 27356192 . + . Parent=GSCOCT00023910001 | |
| 11076 chr1 manual_curation CDS 27354030 27355985 . + 0 Parent=GSCOCT00023910001 | |
| 11077 chr1 manual_curation gene 27358112 27363789 . + . ID=GSCOCG00023911001;Name=Cc01_g08760 | |
| 11078 chr1 manual_curation mRNA 27358112 27363789 . + . ID=GSCOCT00023911001;Parent=GSCOCG00023911001;Name=Cc01_g08760 | |
| 11079 chr1 manual_curation polypeptide 27358224 27363453 . + . ID=GSCOCP00023911001;Dbxref=GENE3D:G3DSA:3.60.110.10,InterPro:IPR000132,InterPro:IPR003010,PFAM:PF00795,PROFILE:PS50263,PROSITE:PS00920,PROSITE:PS00921,SUPERFAMILY:SSF56317,SwissProt:Q42965,SwissProt:Q42966,SwissProt:Q6H849,TAIR:AT3G44300.1,TAIR:AT3G44320.1,TAIR:AT5G22300.1,TrEMBL:F6HHD4,TrEMBL:I1LKN7,TrEMBL:Q5QGZ8;Derives_from=GSCOCT00023911001;Name=Cc01_g08760;Ontology_term=CC_evidence_code:ISS,GO:0006807,CC_EC_number:3.5.5.1,PRODUCT:Bifunctional nitrilase/nitrile hydratase NIT4B,CC_functional_completeness:complete,CC_gene:NIT4B,CC_gene:NIT4A,CC_gene:NIT4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023911001~ Bifunctional nitrilase/nitrile hydratase NIT4B~ NIT4B~ complete;original_location=join(327109..327259%2C328549..328728%2C330035..330328%2C331321..331602%2C332187..332338);owner=coffea | |
| 11080 chr1 manual_curation exon 27358112 27358374 . + . Parent=GSCOCT00023911001 | |
| 11081 chr1 manual_curation exon 27359664 27359843 . + . Parent=GSCOCT00023911001 | |
| 11082 chr1 manual_curation exon 27361150 27361443 . + . Parent=GSCOCT00023911001 | |
| 11083 chr1 manual_curation exon 27362436 27362717 . + . Parent=GSCOCT00023911001 | |
| 11084 chr1 manual_curation exon 27363302 27363789 . + . Parent=GSCOCT00023911001 | |
| 11085 chr1 manual_curation CDS 27358224 27358374 . + 0 Parent=GSCOCT00023911001 | |
| 11086 chr1 manual_curation CDS 27359664 27359843 . + 1 Parent=GSCOCT00023911001 | |
| 11087 chr1 manual_curation CDS 27361150 27361443 . + 1 Parent=GSCOCT00023911001 | |
| 11088 chr1 manual_curation CDS 27362436 27362717 . + 1 Parent=GSCOCT00023911001 | |
| 11089 chr1 manual_curation CDS 27363302 27363453 . + 1 Parent=GSCOCT00023911001 | |
| 11090 chr1 manual_curation gene 27365731 27368379 . - . ID=GSCOCG00023912001;Name=Cc01_g08770 | |
| 11091 chr1 manual_curation mRNA 27365731 27368379 . - . ID=GSCOCT00023912001;Parent=GSCOCG00023912001;Name=Cc01_g08770 | |
| 11092 chr1 manual_curation polypeptide 27365731 27368379 . - . ID=GSCOCP00023912001;Dbxref=SwissProt:Q66GQ2,TAIR:AT1G50660.1,TAIR:AT3G11590.1,TAIR:AT5G22310.1,TrEMBL:B9MYU2,TrEMBL:F6HHD5,TrEMBL:F6HKN8;Derives_from=GSCOCT00023912001;Name=Cc01_g08770;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B LOCATED IN,CC_functional_completeness:complete,CC_gene:At5g41620;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023912001~ Putative unknown protein%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G22310.1)%3B Has 22320 Blast hits to 15179 proteins in 1213 species: Archae - 372%3B Bacteria - 2307%3B Metazoa - 10906%3B Fungi - 1700%3B Plants - 1146%3B Viruses - 65%3B Other Eukaryotes - 5824 (source: NCBI BLink).~ At5g41620~ complete;original_location=complement(join(336788..337264%2C336519..336641%2C334616..335965));owner=coffea | |
| 11093 chr1 manual_curation exon 27365731 27367080 . - . Parent=GSCOCT00023912001 | |
| 11094 chr1 manual_curation exon 27367634 27367756 . - . Parent=GSCOCT00023912001 | |
| 11095 chr1 manual_curation exon 27367903 27368379 . - . Parent=GSCOCT00023912001 | |
| 11096 chr1 manual_curation CDS 27365731 27367080 . - 0 Parent=GSCOCT00023912001 | |
| 11097 chr1 manual_curation CDS 27367634 27367756 . - 0 Parent=GSCOCT00023912001 | |
| 11098 chr1 manual_curation CDS 27367903 27368379 . - 0 Parent=GSCOCT00023912001 | |
| 11099 chr1 manual_curation gene 27374749 27377805 . - . ID=GSCOCG00023914001;Name=Cc01_g08780 | |
| 11100 chr1 manual_curation mRNA 27374749 27377805 . - . ID=GSCOCT00023914001;Parent=GSCOCG00023914001;Name=Cc01_g08780 | |
| 11101 chr1 manual_curation polypeptide 27374943 27377688 . - . ID=GSCOCP00023914001;Dbxref=InterPro:IPR017498,TAIR:AT1G08380.1,TIGRFAMs:TIGR03059,TrEMBL:B9HQ34,TrEMBL:B9MYU1,TrEMBL:B9SCY3;Derives_from=GSCOCT00023914001;Name=Cc01_g08780;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:photosystem I subunit O,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023914001~ photosystem I subunit O~ unknown_gene~ complete;original_location=complement(join(346468..346573%2C346272..346344%2C345957..346136%2C343828..343924));owner=coffea | |
| 11102 chr1 manual_curation exon 27374749 27375039 . - . Parent=GSCOCT00023914001 | |
| 11103 chr1 manual_curation exon 27377072 27377251 . - . Parent=GSCOCT00023914001 | |
| 11104 chr1 manual_curation exon 27377387 27377459 . - . Parent=GSCOCT00023914001 | |
| 11105 chr1 manual_curation exon 27377583 27377805 . - . Parent=GSCOCT00023914001 | |
| 11106 chr1 manual_curation CDS 27374943 27375039 . - 2 Parent=GSCOCT00023914001 | |
| 11107 chr1 manual_curation CDS 27377072 27377251 . - 2 Parent=GSCOCT00023914001 | |
| 11108 chr1 manual_curation CDS 27377387 27377459 . - 1 Parent=GSCOCT00023914001 | |
| 11109 chr1 manual_curation CDS 27377583 27377688 . - 0 Parent=GSCOCT00023914001 | |
| 11110 chr1 manual_curation gene 27381692 27382756 . - . ID=GSCOCG00023916001;Name=Cc01_g08790 | |
| 11111 chr1 manual_curation mRNA 27381692 27382756 . - . ID=GSCOCT00023916001;Parent=GSCOCG00023916001;Name=Cc01_g08790 | |
| 11112 chr1 manual_curation polypeptide 27381692 27382756 . - . ID=GSCOCP00023916001;Dbxref=InterPro:IPR022364,SUPERFAMILY:SSF81383,SwissProt:Q2V3R1,SwissProt:Q9SIH5,SwissProt:Q9XIN8,TAIR:AT2G27310.1,TAIR:AT2G36090.1,TAIR:AT3G44326.1,TrEMBL:B9MYU0,TrEMBL:B9SCY2,TrEMBL:F6HHD6;Derives_from=GSCOCT00023916001;Name=Cc01_g08790;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative F-box protein At2g27310,CC_functional_completeness:complete,CC_gene:At2g27310,CC_gene:At3g44326,CC_gene:At2g36090;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023916001~ Putative F-box protein At2g27310~ At2g27310~ complete;original_location=complement(350577..351641);owner=coffea | |
| 11113 chr1 manual_curation exon 27381692 27382756 . - . Parent=GSCOCT00023916001 | |
| 11114 chr1 manual_curation CDS 27381692 27382756 . - 0 Parent=GSCOCT00023916001 | |
| 11115 chr1 manual_curation gene 27391878 27392285 . + . ID=GSCOCG00023917001;Name=Cc01_g08800 | |
| 11116 chr1 manual_curation mRNA 27391878 27392285 . + . ID=GSCOCT00023917001;Parent=GSCOCG00023917001;Name=Cc01_g08800 | |
| 11117 chr1 manual_curation polypeptide 27392100 27392285 . + . ID=GSCOCP00023917001;Derives_from=GSCOCT00023917001;Name=Cc01_g08800;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023917001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(360985..361063%2C361133..361170);owner=coffea | |
| 11118 chr1 manual_curation exon 27391878 27392178 . + . Parent=GSCOCT00023917001 | |
| 11119 chr1 manual_curation exon 27392248 27392285 . + . Parent=GSCOCT00023917001 | |
| 11120 chr1 manual_curation CDS 27392100 27392178 . + 0 Parent=GSCOCT00023917001 | |
| 11121 chr1 manual_curation CDS 27392248 27392285 . + 1 Parent=GSCOCT00023917001 | |
| 11122 chr1 manual_curation gene 27392386 27392601 . - . ID=GSCOCG00023918001;Name=Cc01_g08810 | |
| 11123 chr1 manual_curation mRNA 27392386 27392601 . - . ID=GSCOCT00023918001;Parent=GSCOCG00023918001;Name=Cc01_g08810 | |
| 11124 chr1 manual_curation polypeptide 27392386 27392601 . - . ID=GSCOCP00023918001;Derives_from=GSCOCT00023918001;Name=Cc01_g08810;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023918001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(361271..361486);owner=coffea | |
| 11125 chr1 manual_curation exon 27392386 27392601 . - . Parent=GSCOCT00023918001 | |
| 11126 chr1 manual_curation CDS 27392386 27392601 . - 0 Parent=GSCOCT00023918001 | |
| 11127 chr1 manual_curation gene 27434274 27437927 . + . ID=GSCOCG00023919001;Name=Cc01_g08820 | |
| 11128 chr1 manual_curation mRNA 27434274 27437927 . + . ID=GSCOCT00023919001;Parent=GSCOCG00023919001;Name=Cc01_g08820 | |
| 11129 chr1 manual_curation polypeptide 27434349 27437295 . + . ID=GSCOCP00023919001;Dbxref=TAIR:AT5G22340.2,TrEMBL:A5AHR1,TrEMBL:B9SCX7,TrEMBL:D7TCR1;Derives_from=GSCOCT00023919001;Name=Cc01_g08820;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023919001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B Has 43 Blast hits to 43 proteins in 15 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 42%3B Viruses - 0%3B Other Eukaryotes - 1 (source: NCBI BLink).~ unknown_gene~ fragment;original_location=join(403234..403354%2C403487..403671%2C403787..403897%2C404012..404068%2C404587..404667%2C405018..405052%2C405435..405524%2C405616..405772%2C406061..406180);owner=coffea | |
| 11130 chr1 manual_curation exon 27434274 27434469 . + . Parent=GSCOCT00023919001 | |
| 11131 chr1 manual_curation exon 27434602 27434786 . + . Parent=GSCOCT00023919001 | |
| 11132 chr1 manual_curation exon 27434902 27435012 . + . Parent=GSCOCT00023919001 | |
| 11133 chr1 manual_curation exon 27435127 27435183 . + . Parent=GSCOCT00023919001 | |
| 11134 chr1 manual_curation exon 27435702 27435782 . + . Parent=GSCOCT00023919001 | |
| 11135 chr1 manual_curation exon 27436133 27436167 . + . Parent=GSCOCT00023919001 | |
| 11136 chr1 manual_curation exon 27436550 27436639 . + . Parent=GSCOCT00023919001 | |
| 11137 chr1 manual_curation exon 27436731 27436887 . + . Parent=GSCOCT00023919001 | |
| 11138 chr1 manual_curation exon 27437176 27437927 . + . Parent=GSCOCT00023919001 | |
| 11139 chr1 manual_curation CDS 27434349 27434469 . + 0 Parent=GSCOCT00023919001 | |
| 11140 chr1 manual_curation CDS 27434602 27434786 . + 1 Parent=GSCOCT00023919001 | |
| 11141 chr1 manual_curation CDS 27434902 27435012 . + 0 Parent=GSCOCT00023919001 | |
| 11142 chr1 manual_curation CDS 27435127 27435183 . + 0 Parent=GSCOCT00023919001 | |
| 11143 chr1 manual_curation CDS 27435702 27435782 . + 0 Parent=GSCOCT00023919001 | |
| 11144 chr1 manual_curation CDS 27436133 27436167 . + 0 Parent=GSCOCT00023919001 | |
| 11145 chr1 manual_curation CDS 27436550 27436639 . + 2 Parent=GSCOCT00023919001 | |
| 11146 chr1 manual_curation CDS 27436731 27436887 . + 2 Parent=GSCOCT00023919001 | |
| 11147 chr1 manual_curation CDS 27437176 27437295 . + 0 Parent=GSCOCT00023919001 | |
| 11148 chr1 manual_curation gene 27439187 27448672 . + . ID=GSCOCG00023920001;Name=Cc01_g08830 | |
| 11149 chr1 manual_curation mRNA 27439187 27448672 . + . ID=GSCOCT00023920001;Parent=GSCOCG00023920001;Name=Cc01_g08830 | |
| 11150 chr1 manual_curation polypeptide 27439277 27448095 . + . ID=GSCOCP00023920001;Dbxref=InterPro:IPR007484,InterPro:IPR018247,PFAM:PF04389,PROSITE:PS00018,SwissProt:Q5XIA1,SwissProt:Q6NZ07,SwissProt:Q8VCM8,TAIR:AT3G44330.1,TrEMBL:B9HQ38,TrEMBL:B9SCX6,TrEMBL:D7TCR2;Derives_from=GSCOCT00023920001;Name=Cc01_g08830;Ontology_term=CC_evidence_code:ISS,GO:0006508,GO:0008233,CC_EC_number:missing_EC_number,PRODUCT:Putative Nicalin-1,CC_functional_completeness:complete,CC_gene:ncl1,CC_gene:Ncln;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023920001~ Putative Nicalin-1~ ncl1~ complete;original_location=join(408162..408501%2C410164..410333%2C411048..411151%2C411572..411638%2C412230..412322%2C412405..412569%2C412639..412779%2C412888..412965%2C413924..414036%2C414133..414193%2C415543..415710%2C416054..416155%2C416625..416714%2C416918..416980);owner=coffea | |
| 11151 chr1 manual_curation exon 27439187 27439616 . + . Parent=GSCOCT00023920001 | |
| 11152 chr1 manual_curation exon 27441279 27441448 . + . Parent=GSCOCT00023920001 | |
| 11153 chr1 manual_curation exon 27442163 27442266 . + . Parent=GSCOCT00023920001 | |
| 11154 chr1 manual_curation exon 27442687 27442753 . + . Parent=GSCOCT00023920001 | |
| 11155 chr1 manual_curation exon 27443345 27443437 . + . Parent=GSCOCT00023920001 | |
| 11156 chr1 manual_curation exon 27443520 27443684 . + . Parent=GSCOCT00023920001 | |
| 11157 chr1 manual_curation exon 27443754 27443894 . + . Parent=GSCOCT00023920001 | |
| 11158 chr1 manual_curation exon 27444003 27444080 . + . Parent=GSCOCT00023920001 | |
| 11159 chr1 manual_curation exon 27445039 27445151 . + . Parent=GSCOCT00023920001 | |
| 11160 chr1 manual_curation exon 27445248 27445308 . + . Parent=GSCOCT00023920001 | |
| 11161 chr1 manual_curation exon 27446658 27446825 . + . Parent=GSCOCT00023920001 | |
| 11162 chr1 manual_curation exon 27447169 27447270 . + . Parent=GSCOCT00023920001 | |
| 11163 chr1 manual_curation exon 27447740 27447829 . + . Parent=GSCOCT00023920001 | |
| 11164 chr1 manual_curation exon 27448033 27448672 . + . Parent=GSCOCT00023920001 | |
| 11165 chr1 manual_curation CDS 27439277 27439616 . + 0 Parent=GSCOCT00023920001 | |
| 11166 chr1 manual_curation CDS 27441279 27441448 . + 1 Parent=GSCOCT00023920001 | |
| 11167 chr1 manual_curation CDS 27442163 27442266 . + 0 Parent=GSCOCT00023920001 | |
| 11168 chr1 manual_curation CDS 27442687 27442753 . + 2 Parent=GSCOCT00023920001 | |
| 11169 chr1 manual_curation CDS 27443345 27443437 . + 0 Parent=GSCOCT00023920001 | |
| 11170 chr1 manual_curation CDS 27443520 27443684 . + 0 Parent=GSCOCT00023920001 | |
| 11171 chr1 manual_curation CDS 27443754 27443894 . + 0 Parent=GSCOCT00023920001 | |
| 11172 chr1 manual_curation CDS 27444003 27444080 . + 0 Parent=GSCOCT00023920001 | |
| 11173 chr1 manual_curation CDS 27445039 27445151 . + 0 Parent=GSCOCT00023920001 | |
| 11174 chr1 manual_curation CDS 27445248 27445308 . + 2 Parent=GSCOCT00023920001 | |
| 11175 chr1 manual_curation CDS 27446658 27446825 . + 0 Parent=GSCOCT00023920001 | |
| 11176 chr1 manual_curation CDS 27447169 27447270 . + 0 Parent=GSCOCT00023920001 | |
| 11177 chr1 manual_curation CDS 27447740 27447829 . + 0 Parent=GSCOCT00023920001 | |
| 11178 chr1 manual_curation CDS 27448033 27448095 . + 0 Parent=GSCOCT00023920001 | |
| 11179 chr1 manual_curation gene 27450369 27458671 . - . ID=GSCOCG00023921001;Name=Cc01_g08840 | |
| 11180 chr1 manual_curation mRNA 27450369 27458671 . - . ID=GSCOCT00023921001;Parent=GSCOCG00023921001;Name=Cc01_g08840 | |
| 11181 chr1 manual_curation polypeptide 27450686 27458554 . - . ID=GSCOCP00023921001;Dbxref=InterPro:IPR010334,PANTHER:PTHR16290,PFAM:PF06058,SwissProt:Q5R413,SwissProt:Q8IZD4,SwissProt:Q9SJF3,TAIR:AT1G08370.1,TrEMBL:D7TCR4,TrEMBL:G7IHH9,TrEMBL:I1LTX6;Derives_from=GSCOCT00023921001;Name=Cc01_g08840;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:mRNA-decapping enzyme-like protein,CC_functional_completeness:complete,CC_gene:At1g08370,CC_gene:DCP1B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023921001~ mRNA-decapping enzyme-like protein~ At1g08370~ complete;original_location=complement(join(427275..427439%2C427132..427172%2C426924..426973%2C425266..425410%2C424422..424478%2C421967..422093%2C420819..421289%2C419571..419627));owner=coffea | |
| 11182 chr1 manual_curation exon 27450369 27450742 . - . Parent=GSCOCT00023921001 | |
| 11183 chr1 manual_curation exon 27451934 27452404 . - . Parent=GSCOCT00023921001 | |
| 11184 chr1 manual_curation exon 27453082 27453208 . - . Parent=GSCOCT00023921001 | |
| 11185 chr1 manual_curation exon 27455537 27455593 . - . Parent=GSCOCT00023921001 | |
| 11186 chr1 manual_curation exon 27456381 27456525 . - . Parent=GSCOCT00023921001 | |
| 11187 chr1 manual_curation exon 27458039 27458088 . - . Parent=GSCOCT00023921001 | |
| 11188 chr1 manual_curation exon 27458247 27458287 . - . Parent=GSCOCT00023921001 | |
| 11189 chr1 manual_curation exon 27458390 27458671 . - . Parent=GSCOCT00023921001 | |
| 11190 chr1 manual_curation CDS 27450686 27450742 . - 0 Parent=GSCOCT00023921001 | |
| 11191 chr1 manual_curation CDS 27451934 27452404 . - 0 Parent=GSCOCT00023921001 | |
| 11192 chr1 manual_curation CDS 27453082 27453208 . - 2 Parent=GSCOCT00023921001 | |
| 11193 chr1 manual_curation CDS 27455537 27455593 . - 2 Parent=GSCOCT00023921001 | |
| 11194 chr1 manual_curation CDS 27456381 27456525 . - 1 Parent=GSCOCT00023921001 | |
| 11195 chr1 manual_curation CDS 27458039 27458088 . - 2 Parent=GSCOCT00023921001 | |
| 11196 chr1 manual_curation CDS 27458247 27458287 . - 0 Parent=GSCOCT00023921001 | |
| 11197 chr1 manual_curation CDS 27458390 27458554 . - 0 Parent=GSCOCT00023921001 | |
| 11198 chr1 manual_curation gene 27459292 27466352 . - . ID=GSCOCG00023922001;Name=Cc01_g08850 | |
| 11199 chr1 manual_curation mRNA 27459292 27466352 . - . ID=GSCOCT00023922001;Parent=GSCOCG00023922001;Name=Cc01_g08850 | |
| 11200 chr1 manual_curation polypeptide 27459855 27465345 . - . ID=GSCOCP00023922001;Dbxref=InterPro:IPR003323,PFAM:PF02338,PROFILE:PS50802,SwissProt:Q08BW0,SwissProt:Q2YDU3,SwissProt:Q3U2S4,TAIR:AT2G27350.5,TAIR:AT5G67170.1,TrEMBL:B9HQ41,TrEMBL:B9SCX1,TrEMBL:F6HHD7;Derives_from=GSCOCT00023922001;Name=Cc01_g08850;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Expressed protein%2C putative,CC_functional_completeness:complete,CC_gene:otud5a,CC_gene:Otud5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023922001~ Expressed protein%2C putative~ otud5a~ complete;original_location=complement(join(433514..434230%2C432744..432905%2C431244..431321%2C429913..429991%2C429673..429818%2C429394..429459%2C429123..429297%2C428740..428963));owner=coffea | |
| 11201 chr1 manual_curation exon 27465617 27465667 . - . Parent=GSCOCT00023922001 | |
| 11202 chr1 manual_curation exon 27466249 27466352 . - . Parent=GSCOCT00023922001 | |
| 11203 chr1 manual_curation exon 27459292 27460078 . - . Parent=GSCOCT00023922001 | |
| 11204 chr1 manual_curation exon 27460238 27460412 . - . Parent=GSCOCT00023922001 | |
| 11205 chr1 manual_curation exon 27460509 27460574 . - . Parent=GSCOCT00023922001 | |
| 11206 chr1 manual_curation exon 27460788 27460933 . - . Parent=GSCOCT00023922001 | |
| 11207 chr1 manual_curation exon 27461028 27461106 . - . Parent=GSCOCT00023922001 | |
| 11208 chr1 manual_curation exon 27462359 27462436 . - . Parent=GSCOCT00023922001 | |
| 11209 chr1 manual_curation exon 27463859 27464020 . - . Parent=GSCOCT00023922001 | |
| 11210 chr1 manual_curation exon 27464629 27465528 . - . Parent=GSCOCT00023922001 | |
| 11211 chr1 manual_curation CDS 27459855 27460078 . - 1 Parent=GSCOCT00023922001 | |
| 11212 chr1 manual_curation CDS 27460238 27460412 . - 0 Parent=GSCOCT00023922001 | |
| 11213 chr1 manual_curation CDS 27460509 27460574 . - 0 Parent=GSCOCT00023922001 | |
| 11214 chr1 manual_curation CDS 27460788 27460933 . - 1 Parent=GSCOCT00023922001 | |
| 11215 chr1 manual_curation CDS 27461028 27461106 . - 0 Parent=GSCOCT00023922001 | |
| 11216 chr1 manual_curation CDS 27462359 27462436 . - 0 Parent=GSCOCT00023922001 | |
| 11217 chr1 manual_curation CDS 27463859 27464020 . - 0 Parent=GSCOCT00023922001 | |
| 11218 chr1 manual_curation CDS 27464629 27465345 . - 0 Parent=GSCOCT00023922001 | |
| 11219 chr1 manual_curation gene 27467636 27468513 . - . ID=GSCOCG00023923001;Name=Cc01_g08860 | |
| 11220 chr1 manual_curation mRNA 27467636 27468513 . - . ID=GSCOCT00023923001;Parent=GSCOCG00023923001;Name=Cc01_g08860 | |
| 11221 chr1 manual_curation polypeptide 27467636 27468513 . - . ID=GSCOCP00023923001;Dbxref=InterPro:IPR006459,InterPro:IPR006702,PFAM:PF04535,SwissProt:B9SCX0,SwissProt:P0DI50,SwissProt:P0DI53,TAIR:AT2G27370.1,TAIR:AT2G36100.1,TAIR:AT5G06200.1,TIGRFAMs:TIGR01569,TrEMBL:I1JGL4,TrEMBL:I1L9G0,TrEMBL:I1M4B2;Derives_from=GSCOCT00023923001;Name=Cc01_g08860;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Casparian strip membrane protein RCOM_1282030,CC_functional_completeness:complete,CC_gene:RCOM_1282030;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023923001~ Casparian strip membrane protein RCOM_1282030~ RCOM_1282030~ complete;original_location=complement(join(437100..437398%2C436831..436954%2C436521..436736));owner=coffea | |
| 11222 chr1 manual_curation exon 27467636 27467851 . - . Parent=GSCOCT00023923001 | |
| 11223 chr1 manual_curation exon 27467946 27468069 . - . Parent=GSCOCT00023923001 | |
| 11224 chr1 manual_curation exon 27468215 27468513 . - . Parent=GSCOCT00023923001 | |
| 11225 chr1 manual_curation CDS 27467636 27467851 . - 0 Parent=GSCOCT00023923001 | |
| 11226 chr1 manual_curation CDS 27467946 27468069 . - 2 Parent=GSCOCT00023923001 | |
| 11227 chr1 manual_curation CDS 27468215 27468513 . - 0 Parent=GSCOCT00023923001 | |
| 11228 chr1 manual_curation gene 27470684 27476788 . - . ID=GSCOCG00023924001;Name=Cc01_g08870 | |
| 11229 chr1 manual_curation mRNA 27470684 27476788 . - . ID=GSCOCT00023924001;Parent=GSCOCG00023924001;Name=Cc01_g08870 | |
| 11230 chr1 manual_curation polypeptide 27471012 27476578 . - . ID=GSCOCP00023924001;Dbxref=InterPro:IPR009367,PFAM:PF06258,SwissProt:Q9ZE28,TAIR:AT5G06180.1,TAIR:AT5G22350.1,TrEMBL:B9HQ43,TrEMBL:B9MYS5,TrEMBL:B9SCW9;Derives_from=GSCOCT00023924001;Name=Cc01_g08870;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized protein RP120,CC_functional_completeness:modules,CC_gene:RP120;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023924001~ Putative Uncharacterized protein RP120~ RP120~ modules;original_location=complement(join(445263..445463%2C444373..444611%2C443710..443806%2C442779..442928%2C442555..442681%2C441615..441727%2C441465..441528%2C441285..441378%2C440751..440859%2C439897..439998));owner=coffea | |
| 11231 chr1 manual_curation exon 27470684 27471113 . - . Parent=GSCOCT00023924001 | |
| 11232 chr1 manual_curation exon 27471866 27471974 . - . Parent=GSCOCT00023924001 | |
| 11233 chr1 manual_curation exon 27472400 27472493 . - . Parent=GSCOCT00023924001 | |
| 11234 chr1 manual_curation exon 27472580 27472643 . - . Parent=GSCOCT00023924001 | |
| 11235 chr1 manual_curation exon 27472730 27472842 . - . Parent=GSCOCT00023924001 | |
| 11236 chr1 manual_curation exon 27473670 27473796 . - . Parent=GSCOCT00023924001 | |
| 11237 chr1 manual_curation exon 27473894 27474043 . - . Parent=GSCOCT00023924001 | |
| 11238 chr1 manual_curation exon 27474825 27474921 . - . Parent=GSCOCT00023924001 | |
| 11239 chr1 manual_curation exon 27475488 27475726 . - . Parent=GSCOCT00023924001 | |
| 11240 chr1 manual_curation exon 27476378 27476788 . - . Parent=GSCOCT00023924001 | |
| 11241 chr1 manual_curation CDS 27471012 27471113 . - 0 Parent=GSCOCT00023924001 | |
| 11242 chr1 manual_curation CDS 27471866 27471974 . - 2 Parent=GSCOCT00023924001 | |
| 11243 chr1 manual_curation CDS 27472400 27472493 . - 1 Parent=GSCOCT00023924001 | |
| 11244 chr1 manual_curation CDS 27472580 27472643 . - 0 Parent=GSCOCT00023924001 | |
| 11245 chr1 manual_curation CDS 27472730 27472842 . - 1 Parent=GSCOCT00023924001 | |
| 11246 chr1 manual_curation CDS 27473670 27473796 . - 0 Parent=GSCOCT00023924001 | |
| 11247 chr1 manual_curation CDS 27473894 27474043 . - 0 Parent=GSCOCT00023924001 | |
| 11248 chr1 manual_curation CDS 27474825 27474921 . - 2 Parent=GSCOCT00023924001 | |
| 11249 chr1 manual_curation CDS 27475488 27475726 . - 0 Parent=GSCOCT00023924001 | |
| 11250 chr1 manual_curation CDS 27476378 27476578 . - 0 Parent=GSCOCT00023924001 | |
| 11251 chr1 manual_curation gene 27480056 27481543 . - . ID=GSCOCG00023925001;Name=Cc01_g08880 | |
| 11252 chr1 manual_curation mRNA 27480056 27481543 . - . ID=GSCOCT00023925001;Parent=GSCOCG00023925001;Name=Cc01_g08880 | |
| 11253 chr1 manual_curation polypeptide 27480056 27481543 . - . ID=GSCOCP00023925001;Dbxref=InterPro:IPR000103,InterPro:IPR008671,InterPro:IPR010108,PFAM:PF05834,PRINTS:PR00469,SwissProt:Q42435,SwissProt:Q9M424,SwissProt:Q9SEA0,TAIR:AT3G10230.1,TAIR:AT5G57030.1,TIGRFAMs:TIGR01790,TrEMBL:B7U386,TrEMBL:B9SCW8,TrEMBL:F1KPE6;Derives_from=GSCOCT00023925001;Name=Cc01_g08880;Ontology_term=CC_evidence_code:ISS,GO:0016117,GO:0016491,GO:0055114,CC_EC_number:5.3.99.8,PRODUCT:Neoxanthin synthase%2C chloroplastic,CC_functional_completeness:complete,CC_gene:NXS,CC_gene:CCS;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023925001~ Neoxanthin synthase%2C chloroplastic~ NXS~ complete;original_location=complement(448941..450428);owner=coffea | |
| 11254 chr1 manual_curation exon 27480056 27481543 . - . Parent=GSCOCT00023925001 | |
| 11255 chr1 manual_curation CDS 27480056 27481543 . - 0 Parent=GSCOCT00023925001 | |
| 11256 chr1 manual_curation gene 27488548 27493090 . - . ID=GSCOCG00023926001;Name=Cc01_g08890 | |
| 11257 chr1 manual_curation mRNA 27488548 27493090 . - . ID=GSCOCT00023926001;Parent=GSCOCG00023926001;Name=Cc01_g08890 | |
| 11258 chr1 manual_curation polypeptide 27488910 27492884 . - . ID=GSCOCP00023926001;Dbxref=InterPro:IPR001388,InterPro:IPR010908,InterPro:IPR011012,PFAM:PF00957,PRINTS:PR00219,PROFILE:PS50859,PROFILE:PS50892,PROSITE:PS00417,SUPERFAMILY:SSF64356,SwissProt:Q9FMR5,SwissProt:Q9LFP1,SwissProt:Q9SIQ9,TAIR:AT2G25340.1,TAIR:AT5G11150.1,TAIR:AT5G22360.1,TrEMBL:B9GI08,TrEMBL:B9SCW7,TrEMBL:D7TCR8;Derives_from=GSCOCT00023926001;Name=Cc01_g08890;Ontology_term=CC_evidence_code:ISS,GO:0006810,GO:0016021,GO:0016192,CC_EC_number:missing_EC_number,PRODUCT:Vesicle-associated membrane protein 714,CC_functional_completeness:complete,CC_gene:VAMP714,CC_gene:VAMP713,CC_gene:VAMP712;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023926001~ Vesicle-associated membrane protein 714~ VAMP714~ complete;original_location=complement(join(461553..461769%2C460412..460606%2C459334..459350%2C458490..458653%2C457795..457888));owner=coffea | |
| 11259 chr1 manual_curation exon 27488548 27489003 . - . Parent=GSCOCT00023926001 | |
| 11260 chr1 manual_curation exon 27489605 27489768 . - . Parent=GSCOCT00023926001 | |
| 11261 chr1 manual_curation exon 27490449 27490465 . - . Parent=GSCOCT00023926001 | |
| 11262 chr1 manual_curation exon 27491527 27491721 . - . Parent=GSCOCT00023926001 | |
| 11263 chr1 manual_curation exon 27492668 27493090 . - . Parent=GSCOCT00023926001 | |
| 11264 chr1 manual_curation CDS 27488910 27489003 . - 2 Parent=GSCOCT00023926001 | |
| 11265 chr1 manual_curation CDS 27489605 27489768 . - 0 Parent=GSCOCT00023926001 | |
| 11266 chr1 manual_curation CDS 27490449 27490465 . - 1 Parent=GSCOCT00023926001 | |
| 11267 chr1 manual_curation CDS 27491527 27491721 . - 1 Parent=GSCOCT00023926001 | |
| 11268 chr1 manual_curation CDS 27492668 27492884 . - 0 Parent=GSCOCT00023926001 | |
| 11269 chr1 manual_curation gene 27508308 27509684 . - . ID=GSCOCG00023928001;Name=Cc01_g08900 | |
| 11270 chr1 manual_curation mRNA 27508308 27509684 . - . ID=GSCOCT00023928001;Parent=GSCOCG00023928001;Name=Cc01_g08900 | |
| 11271 chr1 manual_curation polypeptide 27508308 27509595 . - . ID=GSCOCP00023928001;Dbxref=InterPro:IPR003441,PFAM:PF02365,PROFILE:PS51005,SUPERFAMILY:SSF101941,SwissProt:Q93VY3,SwissProt:Q9FMR3,SwissProt:Q9M290,TAIR:AT2G02450.2,TAIR:AT3G44350.2,TAIR:AT5G22380.1,TrEMBL:B9GI04,TrEMBL:F6I3Y7,TrEMBL:Q9SXQ0;Derives_from=GSCOCT00023928001;Name=Cc01_g08900;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:NAC domain-containing protein 90,CC_functional_completeness:complete,CC_gene:NAC090,CC_gene:NAC061,CC_gene:NAC072;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023928001~ NAC domain-containing protein 90~ NAC090~ complete;original_location=complement(join(478321..478480%2C477913..478208%2C477193..477510));owner=coffea | |
| 11272 chr1 manual_curation exon 27508308 27508625 . - . Parent=GSCOCT00023928001 | |
| 11273 chr1 manual_curation exon 27509028 27509323 . - . Parent=GSCOCT00023928001 | |
| 11274 chr1 manual_curation exon 27509436 27509684 . - . Parent=GSCOCT00023928001 | |
| 11275 chr1 manual_curation CDS 27508308 27508625 . - 0 Parent=GSCOCT00023928001 | |
| 11276 chr1 manual_curation CDS 27509028 27509323 . - 1 Parent=GSCOCT00023928001 | |
| 11277 chr1 manual_curation CDS 27509436 27509595 . - 0 Parent=GSCOCT00023928001 | |
| 11278 chr1 manual_curation gene 27514606 27515728 . - . ID=GSCOCG00023929001;Name=Cc01_g08910 | |
| 11279 chr1 manual_curation mRNA 27514606 27515728 . - . ID=GSCOCT00023929001;Parent=GSCOCG00023929001;Name=Cc01_g08910 | |
| 11280 chr1 manual_curation polypeptide 27514939 27515697 . - . ID=GSCOCP00023929001;Dbxref=InterPro:IPR006041,PFAM:PF01190,TAIR:AT2G27385.1,TAIR:AT5G22430.1,TrEMBL:A5BY12,TrEMBL:A9PI57,TrEMBL:B9SCW4;Derives_from=GSCOCT00023929001;Name=Cc01_g08910;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Pollen Ole e 1 allergen and extensin family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023929001~ Putative Pollen Ole e 1 allergen and extensin family protein~ unknown_gene~ complete;original_location=complement(join(484453..484582%2C483824..484221));owner=coffea | |
| 11281 chr1 manual_curation exon 27514606 27515336 . - . Parent=GSCOCT00023929001 | |
| 11282 chr1 manual_curation exon 27515568 27515728 . - . Parent=GSCOCT00023929001 | |
| 11283 chr1 manual_curation CDS 27514939 27515336 . - 1 Parent=GSCOCT00023929001 | |
| 11284 chr1 manual_curation CDS 27515568 27515697 . - 0 Parent=GSCOCT00023929001 | |
| 11285 chr1 manual_curation gene 27523309 27523947 . - . ID=GSCOCG00023930001;Name=Cc01_g08920 | |
| 11286 chr1 manual_curation mRNA 27523309 27523947 . - . ID=GSCOCT00023930001;Parent=GSCOCG00023930001;Name=Cc01_g08920 | |
| 11287 chr1 manual_curation polypeptide 27523309 27523947 . - . ID=GSCOCP00023930001;Dbxref=GENE3D:G3DSA:2.60.120.10,InterPro:IPR001929,InterPro:IPR006045,InterPro:IPR011051,InterPro:IPR014710,PFAM:PF00190,PRINTS:PR00325,SMART:SM00835,SUPERFAMILY:SSF51182,SwissProt:Q652P9,SwissProt:Q652Q0,SwissProt:Q652Q1,TAIR:AT1G09560.1,TAIR:AT1G18970.1,TAIR:AT1G18980.1,TrEMBL:B9HVV7,TrEMBL:B9MYQ6,TrEMBL:B9SCW0;Derives_from=GSCOCT00023930001;Name=Cc01_g08920;Ontology_term=CC_evidence_code:ISS,GO:0030145,GO:0045735,GO:0048046,CC_EC_number:1.15.1.1,PRODUCT:Germin-like protein 9-3,CC_functional_completeness:complete,CC_gene:Os09g0568700,CC_gene:Os09g0568600,CC_gene:Os09g0568500;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023930001~ Germin-like protein 9-3~ Os09g0568700~ complete;original_location=complement(492194..492832);owner=coffea | |
| 11288 chr1 manual_curation exon 27523309 27523947 . - . Parent=GSCOCT00023930001 | |
| 11289 chr1 manual_curation CDS 27523309 27523947 . - 0 Parent=GSCOCT00023930001 | |
| 11290 chr1 manual_curation gene 27527537 27529628 . + . ID=GSCOCG00023931001;Name=Cc01_g08930 | |
| 11291 chr1 manual_curation mRNA 27527537 27529628 . + . ID=GSCOCT00023931001;Parent=GSCOCG00023931001;Name=Cc01_g08930 | |
| 11292 chr1 manual_curation polypeptide 27527736 27529116 . + . ID=GSCOCP00023931001;Dbxref=GENE3D:G3DSA:1.10.1620.20,InterPro:IPR006721,PFAM:PF04627,SUPERFAMILY:SSF48690,SwissProt:Q06450,SwissProt:Q41898,SwissProt:Q96253,TAIR:AT1G51650.1,TrEMBL:B9RU09,TrEMBL:C6GFP6,TrEMBL:D7KHU4;Derives_from=GSCOCT00023931001;Name=Cc01_g08930;Ontology_term=CC_evidence_code:ISS,GO:0015986,CC_EC_number:missing_EC_number,PRODUCT:ATP synthase subunit epsilon%2C mitochondrial,CC_functional_completeness:complete,CC_gene:At1g51650;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023931001~ ATP synthase subunit epsilon%2C mitochondrial~ At1g51650~ complete;original_location=join(496621..496804%2C497973..498001);owner=coffea | |
| 11293 chr1 manual_curation exon 27527537 27527919 . + . Parent=GSCOCT00023931001 | |
| 11294 chr1 manual_curation exon 27529088 27529628 . + . Parent=GSCOCT00023931001 | |
| 11295 chr1 manual_curation CDS 27527736 27527919 . + 0 Parent=GSCOCT00023931001 | |
| 11296 chr1 manual_curation CDS 27529088 27529116 . + 1 Parent=GSCOCT00023931001 | |
| 11297 chr1 manual_curation gene 27535957 27536918 . + . ID=GSCOCG00023932001;Name=Cc01_g08940 | |
| 11298 chr1 manual_curation mRNA 27535957 27536918 . + . ID=GSCOCT00023932001;Parent=GSCOCG00023932001;Name=Cc01_g08940 | |
| 11299 chr1 manual_curation polypeptide 27535957 27536583 . + . ID=GSCOCP00023932001;Dbxref=GENE3D:G3DSA:2.60.120.10,InterPro:IPR001929,InterPro:IPR006045,InterPro:IPR011051,InterPro:IPR014710,PFAM:PF00190,PRINTS:PR00325,SMART:SM00835,SUPERFAMILY:SSF51182,SwissProt:Q652P9,SwissProt:Q652Q0,SwissProt:Q652Q1,TAIR:AT1G02335.1,TAIR:AT3G04180.1,TAIR:AT3G62020.1,TrEMBL:A5BAY2,TrEMBL:D7TCS5,TrEMBL:F6HHE8;Derives_from=GSCOCT00023932001;Name=Cc01_g08940;Ontology_term=CC_evidence_code:ISS,GO:0030145,GO:0045735,GO:0048046,CC_EC_number:1.2.3.4,PRODUCT:Germin-like protein 9-3,CC_functional_completeness:complete,CC_gene:Os09g0568700,CC_gene:Os09g0568600,CC_gene:Os09g0568500;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023932001~ Germin-like protein 9-3~ Os09g0568700~ complete;original_location=504842..505468;owner=coffea | |
| 11300 chr1 manual_curation exon 27535957 27536918 . + . Parent=GSCOCT00023932001 | |
| 11301 chr1 manual_curation CDS 27535957 27536583 . + 0 Parent=GSCOCT00023932001 | |
| 11302 chr1 manual_curation gene 27537002 27538539 . - . ID=GSCOCG00023933001;Name=Cc01_g08950 | |
| 11303 chr1 manual_curation mRNA 27537002 27538539 . - . ID=GSCOCT00023933001;Parent=GSCOCG00023933001;Name=Cc01_g08950 | |
| 11304 chr1 manual_curation polypeptide 27537264 27538368 . - . ID=GSCOCP00023933001;Dbxref=InterPro:IPR020874,PFAM:PF11909,SwissProt:B7JYJ3,SwissProt:B8HUU1,SwissProt:Q110A6,TAIR:AT5G58260.1,TrEMBL:C6TLQ9,TrEMBL:I1LM00,TrEMBL:I1MZM9;Derives_from=GSCOCT00023933001;Name=Cc01_g08950;Ontology_term=CC_evidence_code:ISS,GO:0016020,GO:0055114,CC_EC_number:missing_EC_number,PRODUCT:Putative NAD(P)H-quinone oxidoreductase subunit N,CC_functional_completeness:modules,CC_gene:ndhN;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023933001~ Putative NAD(P)H-quinone oxidoreductase subunit N~ ndhN~ modules;original_location=complement(join(506852..507253%2C506548..506664%2C506371..506456%2C506149..506212));owner=coffea | |
| 11305 chr1 manual_curation exon 27537002 27537327 . - . Parent=GSCOCT00023933001 | |
| 11306 chr1 manual_curation exon 27537486 27537571 . - . Parent=GSCOCT00023933001 | |
| 11307 chr1 manual_curation exon 27537663 27537779 . - . Parent=GSCOCT00023933001 | |
| 11308 chr1 manual_curation exon 27537967 27538539 . - . Parent=GSCOCT00023933001 | |
| 11309 chr1 manual_curation CDS 27537264 27537327 . - 2 Parent=GSCOCT00023933001 | |
| 11310 chr1 manual_curation CDS 27537486 27537571 . - 0 Parent=GSCOCT00023933001 | |
| 11311 chr1 manual_curation CDS 27537663 27537779 . - 0 Parent=GSCOCT00023933001 | |
| 11312 chr1 manual_curation CDS 27537967 27538368 . - 0 Parent=GSCOCT00023933001 | |
| 11313 chr1 manual_curation gene 27539737 27541365 . - . ID=GSCOCG00023934001;Name=Cc01_g08960 | |
| 11314 chr1 manual_curation mRNA 27539737 27541365 . - . ID=GSCOCT00023934001;Parent=GSCOCG00023934001;Name=Cc01_g08960 | |
| 11315 chr1 manual_curation polypeptide 27539737 27541365 . - . ID=GSCOCP00023934001;Dbxref=InterPro:IPR000823,InterPro:IPR002016,InterPro:IPR010255,InterPro:IPR019793,InterPro:IPR019794,PFAM:PF00141,PRINTS:PR00458,PRINTS:PR00461,PROFILE:PS50873,PROSITE:PS00435,PROSITE:PS00436,SUPERFAMILY:SSF48113,SwissProt:Q43729,SwissProt:Q93V93,SwissProt:Q9FMR0,TAIR:AT4G26010.1,TAIR:AT5G17820.1,TAIR:AT5G22410.1,TrEMBL:A5BAY3,TrEMBL:B9ICD7,TrEMBL:D7TCS7;Derives_from=GSCOCT00023934001;Name=Cc01_g08960;Ontology_term=CC_evidence_code:ISS,GO:0004601,GO:0006979,GO:0020037,GO:0055114,CC_EC_number:1.11.1.7,PRODUCT:Peroxidase 60,CC_functional_completeness:complete,CC_gene:PER60,CC_gene:PER57,CC_gene:PER44;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023934001~ Peroxidase 60~ PER60~ complete;original_location=complement(join(510020..510250%2C509722..509901%2C509334..509493%2C508622..509037));owner=coffea | |
| 11316 chr1 manual_curation exon 27539737 27540152 . - . Parent=GSCOCT00023934001 | |
| 11317 chr1 manual_curation exon 27540449 27540608 . - . Parent=GSCOCT00023934001 | |
| 11318 chr1 manual_curation exon 27540837 27541016 . - . Parent=GSCOCT00023934001 | |
| 11319 chr1 manual_curation exon 27541135 27541365 . - . Parent=GSCOCT00023934001 | |
| 11320 chr1 manual_curation CDS 27539737 27540152 . - 1 Parent=GSCOCT00023934001 | |
| 11321 chr1 manual_curation CDS 27540449 27540608 . - 0 Parent=GSCOCT00023934001 | |
| 11322 chr1 manual_curation CDS 27540837 27541016 . - 0 Parent=GSCOCT00023934001 | |
| 11323 chr1 manual_curation CDS 27541135 27541365 . - 0 Parent=GSCOCT00023934001 | |
| 11324 chr1 manual_curation gene 27548584 27550237 . - . ID=GSCOCG00023937001;Name=Cc01_g08970 | |
| 11325 chr1 manual_curation mRNA 27548584 27550237 . - . ID=GSCOCT00023937001;Parent=GSCOCG00023937001;Name=Cc01_g08970 | |
| 11326 chr1 manual_curation polypeptide 27548584 27550237 . - . ID=GSCOCP00023937001;Dbxref=InterPro:IPR000823,InterPro:IPR002016,InterPro:IPR010255,PFAM:PF00141,PRINTS:PR00461,PROFILE:PS50873,SUPERFAMILY:SSF48113,SwissProt:Q39034,SwissProt:Q42517,SwissProt:Q9FMR0,TAIR:AT5G19890.1,TAIR:AT5G22410.1,TAIR:AT5G64120.1,TrEMBL:A1YBM0,TrEMBL:A5BAY3,TrEMBL:D7TCS7;Derives_from=GSCOCT00023937001;Name=Cc01_g08970;Ontology_term=CC_evidence_code:ISS,GO:0004601,GO:0006979,GO:0020037,GO:0055114,CC_EC_number:1.11.1.7,PRODUCT:Peroxidase 60,CC_functional_completeness:fragment,CC_gene:PER60,CC_gene:HRPN,CC_gene:PER59;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023937001~ Peroxidase 60~ PER60~ fragment;original_location=complement(join(519091..519122%2C518577..518850%2C517469..517669));owner=coffea | |
| 11327 chr1 manual_curation exon 27548584 27548784 . - . Parent=GSCOCT00023937001 | |
| 11328 chr1 manual_curation exon 27549692 27549965 . - . Parent=GSCOCT00023937001 | |
| 11329 chr1 manual_curation exon 27550206 27550237 . - . Parent=GSCOCT00023937001 | |
| 11330 chr1 manual_curation CDS 27548584 27548784 . - 0 Parent=GSCOCT00023937001 | |
| 11331 chr1 manual_curation CDS 27549692 27549965 . - 2 Parent=GSCOCT00023937001 | |
| 11332 chr1 manual_curation CDS 27550206 27550237 . - 0 Parent=GSCOCT00023937001 | |
| 11333 chr1 manual_curation gene 27552828 27553442 . + . ID=GSCOCG00023938001;Name=Cc01_g08980 | |
| 11334 chr1 manual_curation mRNA 27552828 27553442 . + . ID=GSCOCT00023938001;Parent=GSCOCG00023938001;Name=Cc01_g08980 | |
| 11335 chr1 manual_curation polypeptide 27552891 27553442 . + . ID=GSCOCP00023938001;Dbxref=InterPro:IPR004864,InterPro:IPR013990,PFAM:PF03168,SMART:SM00769,TAIR:AT3G44380.1,TrEMBL:B9SCV5,TrEMBL:I1LKQ5,TrEMBL:Q9M287;Derives_from=GSCOCT00023938001;Name=Cc01_g08980;Ontology_term=CC_evidence_code:ISS,GO:0009269,CC_EC_number:missing_EC_number,PRODUCT:Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023938001~ Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family~ unknown_gene~ complete;original_location=521776..522327;owner=coffea | |
| 11336 chr1 manual_curation exon 27552828 27553442 . + . Parent=GSCOCT00023938001 | |
| 11337 chr1 manual_curation CDS 27552891 27553442 . + 0 Parent=GSCOCT00023938001 | |
| 11338 chr1 manual_curation gene 27555413 27561161 . + . ID=GSCOCG00023939001;Name=Cc01_g08990 | |
| 11339 chr1 manual_curation mRNA 27555413 27561161 . + . ID=GSCOCT00023939001;Parent=GSCOCG00023939001;Name=Cc01_g08990 | |
| 11340 chr1 manual_curation polypeptide 27555551 27560092 . + . ID=GSCOCP00023939001;Dbxref=GENE3D:G3DSA:3.60.110.10,InterPro:IPR003010,InterPro:IPR017755,PFAM:PF00795,PROFILE:PS50263,SUPERFAMILY:SSF56317,SwissProt:Q3HVN1,SwissProt:Q8VYF5,SwissProt:Q9XGI9,TAIR:AT2G27450.2,TAIR:AT5G12040.1,TAIR:AT5G64370.1,TIGRFAMs:TIGR03381,TrEMBL:A9PJQ3,TrEMBL:B9MYV7,TrEMBL:D7TCT6;Derives_from=GSCOCT00023939001;Name=Cc01_g08990;Ontology_term=CC_evidence_code:ISS,GO:0006596,GO:0006807,GO:0050126,CC_EC_number:3.5.1.77,PRODUCT:N-carbamoylputrescine amidase,CC_functional_completeness:complete,CC_gene:CPA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023939001~ N-carbamoylputrescine amidase~ CPA~ complete;original_location=join(524436..524524%2C525630..525678%2C525932..526023%2C526165..526316%2C526418..526464%2C526568..526601%2C526848..527014%2C528602..528698%2C528802..528977);owner=coffea | |
| 11341 chr1 manual_curation exon 27555413 27555639 . + . Parent=GSCOCT00023939001 | |
| 11342 chr1 manual_curation exon 27556745 27556793 . + . Parent=GSCOCT00023939001 | |
| 11343 chr1 manual_curation exon 27557047 27557138 . + . Parent=GSCOCT00023939001 | |
| 11344 chr1 manual_curation exon 27557280 27557431 . + . Parent=GSCOCT00023939001 | |
| 11345 chr1 manual_curation exon 27557533 27557579 . + . Parent=GSCOCT00023939001 | |
| 11346 chr1 manual_curation exon 27557683 27557716 . + . Parent=GSCOCT00023939001 | |
| 11347 chr1 manual_curation exon 27557963 27558129 . + . Parent=GSCOCT00023939001 | |
| 11348 chr1 manual_curation exon 27559717 27559813 . + . Parent=GSCOCT00023939001 | |
| 11349 chr1 manual_curation exon 27559917 27561161 . + . Parent=GSCOCT00023939001 | |
| 11350 chr1 manual_curation CDS 27555551 27555639 . + 0 Parent=GSCOCT00023939001 | |
| 11351 chr1 manual_curation CDS 27556745 27556793 . + 2 Parent=GSCOCT00023939001 | |
| 11352 chr1 manual_curation CDS 27557047 27557138 . + 0 Parent=GSCOCT00023939001 | |
| 11353 chr1 manual_curation CDS 27557280 27557431 . + 2 Parent=GSCOCT00023939001 | |
| 11354 chr1 manual_curation CDS 27557533 27557579 . + 1 Parent=GSCOCT00023939001 | |
| 11355 chr1 manual_curation CDS 27557683 27557716 . + 0 Parent=GSCOCT00023939001 | |
| 11356 chr1 manual_curation CDS 27557963 27558129 . + 1 Parent=GSCOCT00023939001 | |
| 11357 chr1 manual_curation CDS 27559717 27559813 . + 0 Parent=GSCOCT00023939001 | |
| 11358 chr1 manual_curation CDS 27559917 27560092 . + 1 Parent=GSCOCT00023939001 | |
| 11359 chr1 manual_curation gene 27562738 27563619 . - . ID=GSCOCG00023941001;Name=Cc01_g09000 | |
| 11360 chr1 manual_curation mRNA 27562738 27563619 . - . ID=GSCOCT00023941001;Parent=GSCOCG00023941001;Name=Cc01_g09000 | |
| 11361 chr1 manual_curation polypeptide 27562738 27563619 . - . ID=GSCOCP00023941001;Dbxref=InterPro:IPR021410,PFAM:PF11250,TAIR:AT5G22390.1,TrEMBL:B9HQ17,TrEMBL:B9SCV3,TrEMBL:F6HHF4;Derives_from=GSCOCT00023941001;Name=Cc01_g09000;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023941001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=complement(531623..532504);owner=coffea | |
| 11362 chr1 manual_curation exon 27562738 27563619 . - . Parent=GSCOCT00023941001 | |
| 11363 chr1 manual_curation CDS 27562738 27563619 . - 0 Parent=GSCOCT00023941001 | |
| 11364 chr1 manual_curation gene 27567279 27573531 . - . ID=GSCOCG00023942001;Name=Cc01_g09010 | |
| 11365 chr1 manual_curation mRNA 27567279 27573531 . - . ID=GSCOCT00023942001;Parent=GSCOCG00023942001;Name=Cc01_g09010 | |
| 11366 chr1 manual_curation polypeptide 27567658 27573382 . - . ID=GSCOCP00023942001;Dbxref=GENE3D:G3DSA:1.10.555.10,InterPro:IPR000095,InterPro:IPR000198,InterPro:IPR008936,PFAM:PF00620,PFAM:PF00786,PROFILE:PS50108,PROFILE:PS50238,SMART:SM00285,SMART:SM00324,SUPERFAMILY:SSF48350,SwissProt:Q10164,SwissProt:Q54TH9,SwissProt:Q54Y72,TAIR:AT1G08340.1,TAIR:AT3G11490.1,TAIR:AT5G22400.1,TrEMBL:B9SCV2,TrEMBL:F6HHF3,TrEMBL:Q0PKR6;Derives_from=GSCOCT00023942001;Name=Cc01_g09010;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0007165,CC_EC_number:missing_EC_number,PRODUCT:Rho GTPase activating protein with PAK-box/P21-Rho-binding domain,CC_functional_completeness:fragment,CC_gene:gacA,CC_gene:rga2,CC_gene:gacY;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023942001~ Rho GTPase activating protein with PAK-box/P21-Rho-binding domain~ gacA~ fragment;original_location=complement(join(542143..542267%2C539902..540022%2C539651..539770%2C537831..538061%2C536543..537121));owner=coffea | |
| 11367 chr1 manual_curation exon 27567279 27568236 . - . Parent=GSCOCT00023942001 | |
| 11368 chr1 manual_curation exon 27568946 27569176 . - . Parent=GSCOCT00023942001 | |
| 11369 chr1 manual_curation exon 27570766 27570885 . - . Parent=GSCOCT00023942001 | |
| 11370 chr1 manual_curation exon 27571017 27571137 . - . Parent=GSCOCT00023942001 | |
| 11371 chr1 manual_curation exon 27573258 27573531 . - . Parent=GSCOCT00023942001 | |
| 11372 chr1 manual_curation CDS 27567658 27568236 . - 0 Parent=GSCOCT00023942001 | |
| 11373 chr1 manual_curation CDS 27568946 27569176 . - 0 Parent=GSCOCT00023942001 | |
| 11374 chr1 manual_curation CDS 27570766 27570885 . - 0 Parent=GSCOCT00023942001 | |
| 11375 chr1 manual_curation CDS 27571017 27571137 . - 2 Parent=GSCOCT00023942001 | |
| 11376 chr1 manual_curation CDS 27573258 27573382 . - 0 Parent=GSCOCT00023942001 | |
| 11377 chr1 manual_curation gene 27573585 27574762 . + . ID=GSCOCG00023943001;Name=Cc01_g09020 | |
| 11378 chr1 manual_curation mRNA 27573585 27574762 . + . ID=GSCOCT00023943001;Parent=GSCOCG00023943001;Name=Cc01_g09020 | |
| 11379 chr1 manual_curation polypeptide 27574520 27574762 . + . ID=GSCOCP00023943001;Derives_from=GSCOCT00023943001;Name=Cc01_g09020;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023943001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=543405..543647;owner=coffea | |
| 11380 chr1 manual_curation exon 27573585 27574762 . + . Parent=GSCOCT00023943001 | |
| 11381 chr1 manual_curation CDS 27574520 27574762 . + 0 Parent=GSCOCT00023943001 | |
| 11382 chr1 manual_curation gene 27576975 27578249 . + . ID=GSCOCG00023944001;Name=Cc01_g09030 | |
| 11383 chr1 manual_curation mRNA 27576975 27578249 . + . ID=GSCOCT00023944001;Parent=GSCOCG00023944001;Name=Cc01_g09030 | |
| 11384 chr1 manual_curation polypeptide 27577219 27577962 . + . ID=GSCOCP00023944001;Derives_from=GSCOCT00023944001;Name=Cc01_g09030;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023944001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(546104..546241%2C546707..546847);owner=coffea | |
| 11385 chr1 manual_curation exon 27576975 27577031 . + . Parent=GSCOCT00023944001 | |
| 11386 chr1 manual_curation exon 27577187 27577356 . + . Parent=GSCOCT00023944001 | |
| 11387 chr1 manual_curation exon 27577822 27578249 . + . Parent=GSCOCT00023944001 | |
| 11388 chr1 manual_curation CDS 27577219 27577356 . + 0 Parent=GSCOCT00023944001 | |
| 11389 chr1 manual_curation CDS 27577822 27577962 . + 0 Parent=GSCOCT00023944001 | |
| 11390 chr1 manual_curation gene 27578684 27581333 . - . ID=GSCOCG00023946001;Name=Cc01_g09040 | |
| 11391 chr1 manual_curation mRNA 27578684 27581333 . - . ID=GSCOCT00023946001;Parent=GSCOCG00023946001;Name=Cc01_g09040 | |
| 11392 chr1 manual_curation polypeptide 27578770 27581333 . - . ID=GSCOCP00023946001;Dbxref=SwissProt:Q9ZUX4,TAIR:AT2G27730.1,TrEMBL:A5C5V6,TrEMBL:B9SCV1,TrEMBL:F6HHF6;Derives_from=GSCOCT00023946001;Name=Cc01_g09040;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterized protein At2g27730%2C mitochondrial,CC_functional_completeness:modules,CC_gene:At2g27730;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023946001~ Uncharacterized protein At2g27730%2C mitochondrial~ At2g27730~ modules;original_location=complement(join(550172..550218%2C550025..550117%2C549479..549605%2C548293..548331%2C547655..547864));owner=coffea | |
| 11393 chr1 manual_curation exon 27578684 27578979 . - . Parent=GSCOCT00023946001 | |
| 11394 chr1 manual_curation exon 27579408 27579446 . - . Parent=GSCOCT00023946001 | |
| 11395 chr1 manual_curation exon 27580594 27580720 . - . Parent=GSCOCT00023946001 | |
| 11396 chr1 manual_curation exon 27581140 27581232 . - . Parent=GSCOCT00023946001 | |
| 11397 chr1 manual_curation exon 27581287 27581333 . - . Parent=GSCOCT00023946001 | |
| 11398 chr1 manual_curation CDS 27578770 27578979 . - 0 Parent=GSCOCT00023946001 | |
| 11399 chr1 manual_curation CDS 27579408 27579446 . - 0 Parent=GSCOCT00023946001 | |
| 11400 chr1 manual_curation CDS 27580594 27580720 . - 2 Parent=GSCOCT00023946001 | |
| 11401 chr1 manual_curation CDS 27581140 27581232 . - 2 Parent=GSCOCT00023946001 | |
| 11402 chr1 manual_curation CDS 27581287 27581333 . - 0 Parent=GSCOCT00023946001 | |
| 11403 chr1 manual_curation gene 27584938 27592279 . + . ID=GSCOCG00023947001;Name=Cc01_g09050 | |
| 11404 chr1 manual_curation mRNA 27584938 27592279 . + . ID=GSCOCT00023947001;Parent=GSCOCG00023947001;Name=Cc01_g09050 | |
| 11405 chr1 manual_curation polypeptide 27584967 27591818 . + . ID=GSCOCP00023947001;Dbxref=InterPro:IPR006895,InterPro:IPR006896,InterPro:IPR006900,PFAM:PF04810,PFAM:PF04811,PFAM:PF04815,SUPERFAMILY:SSF81811,SUPERFAMILY:SSF82919,SwissProt:O95487,SwissProt:Q0PVD8,SwissProt:Q875V8,TAIR:AT2G27460.1,TAIR:AT3G07100.1,TAIR:AT3G44340.1,TrEMBL:B9HQ13,TrEMBL:B9MYW1,TrEMBL:D7TCU0;Derives_from=GSCOCT00023947001;Name=Cc01_g09050;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0006886,GO:0006888,GO:0008270,GO:0030127,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein transport protein Sec24B,CC_functional_completeness:fragment,CC_gene:SEC241,CC_gene:SEC24B,CC_gene:SEC24;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023947001~ Putative Protein transport protein Sec24B~ SEC241~ fragment;original_location=join(553852..554179%2C554671..554730%2C555699..555752%2C555850..556022%2C556174..556360%2C556598..556743%2C556816..556970%2C557176..557257%2C557341..557456%2C557818..557916%2C558292..558415%2C559134..559411%2C560135..560349%2C560492..560703);owner=coffea | |
| 11406 chr1 manual_curation exon 27584938 27585294 . + . Parent=GSCOCT00023947001 | |
| 11407 chr1 manual_curation exon 27585786 27585845 . + . Parent=GSCOCT00023947001 | |
| 11408 chr1 manual_curation exon 27586814 27586867 . + . Parent=GSCOCT00023947001 | |
| 11409 chr1 manual_curation exon 27586965 27587137 . + . Parent=GSCOCT00023947001 | |
| 11410 chr1 manual_curation exon 27587289 27587475 . + . Parent=GSCOCT00023947001 | |
| 11411 chr1 manual_curation exon 27587713 27587858 . + . Parent=GSCOCT00023947001 | |
| 11412 chr1 manual_curation exon 27587931 27588085 . + . Parent=GSCOCT00023947001 | |
| 11413 chr1 manual_curation exon 27588291 27588372 . + . Parent=GSCOCT00023947001 | |
| 11414 chr1 manual_curation exon 27588456 27588571 . + . Parent=GSCOCT00023947001 | |
| 11415 chr1 manual_curation exon 27588933 27589031 . + . Parent=GSCOCT00023947001 | |
| 11416 chr1 manual_curation exon 27589407 27589530 . + . Parent=GSCOCT00023947001 | |
| 11417 chr1 manual_curation exon 27590249 27590526 . + . Parent=GSCOCT00023947001 | |
| 11418 chr1 manual_curation exon 27591250 27591464 . + . Parent=GSCOCT00023947001 | |
| 11419 chr1 manual_curation exon 27591607 27592279 . + . Parent=GSCOCT00023947001 | |
| 11420 chr1 manual_curation CDS 27584967 27585294 . + 0 Parent=GSCOCT00023947001 | |
| 11421 chr1 manual_curation CDS 27585786 27585845 . + 1 Parent=GSCOCT00023947001 | |
| 11422 chr1 manual_curation CDS 27586814 27586867 . + 1 Parent=GSCOCT00023947001 | |
| 11423 chr1 manual_curation CDS 27586965 27587137 . + 1 Parent=GSCOCT00023947001 | |
| 11424 chr1 manual_curation CDS 27587289 27587475 . + 0 Parent=GSCOCT00023947001 | |
| 11425 chr1 manual_curation CDS 27587713 27587858 . + 1 Parent=GSCOCT00023947001 | |
| 11426 chr1 manual_curation CDS 27587931 27588085 . + 0 Parent=GSCOCT00023947001 | |
| 11427 chr1 manual_curation CDS 27588291 27588372 . + 2 Parent=GSCOCT00023947001 | |
| 11428 chr1 manual_curation CDS 27588456 27588571 . + 0 Parent=GSCOCT00023947001 | |
| 11429 chr1 manual_curation CDS 27588933 27589031 . + 2 Parent=GSCOCT00023947001 | |
| 11430 chr1 manual_curation CDS 27589407 27589530 . + 2 Parent=GSCOCT00023947001 | |
| 11431 chr1 manual_curation CDS 27590249 27590526 . + 0 Parent=GSCOCT00023947001 | |
| 11432 chr1 manual_curation CDS 27591250 27591464 . + 2 Parent=GSCOCT00023947001 | |
| 11433 chr1 manual_curation CDS 27591607 27591818 . + 1 Parent=GSCOCT00023947001 | |
| 11434 chr1 manual_curation gene 27593615 27596177 . + . ID=GSCOCG00023948001;Name=Cc01_g09060 | |
| 11435 chr1 manual_curation mRNA 27593615 27596177 . + . ID=GSCOCT00023948001;Parent=GSCOCG00023948001;Name=Cc01_g09060 | |
| 11436 chr1 manual_curation polypeptide 27593615 27595604 . + . ID=GSCOCP00023948001;Derives_from=GSCOCT00023948001;Name=Cc01_g09060;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023948001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(562500..562636%2C564441..564489);owner=coffea | |
| 11437 chr1 manual_curation exon 27593615 27593751 . + . Parent=GSCOCT00023948001 | |
| 11438 chr1 manual_curation exon 27595556 27596177 . + . Parent=GSCOCT00023948001 | |
| 11439 chr1 manual_curation CDS 27593615 27593751 . + 0 Parent=GSCOCT00023948001 | |
| 11440 chr1 manual_curation CDS 27595556 27595604 . + 2 Parent=GSCOCT00023948001 | |
| 11441 chr1 manual_curation gene 27596258 27600608 . + . ID=GSCOCG00023949001;Name=Cc01_g09070 | |
| 11442 chr1 manual_curation mRNA 27596258 27600608 . + . ID=GSCOCT00023949001;Parent=GSCOCG00023949001;Name=Cc01_g09070 | |
| 11443 chr1 manual_curation polypeptide 27596258 27600299 . + . ID=GSCOCP00023949001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR003954,InterPro:IPR012677,PFAM:PF00076,PROFILE:PS50102,SMART:SM00360,SMART:SM00361,SwissProt:O60506,SwissProt:Q7TMK9,SwissProt:Q7TP47,TAIR:AT3G52660.1,TAIR:AT4G00830.1,TAIR:AT5G28390.1,TrEMBL:B9HQ12,TrEMBL:B9MYW2,TrEMBL:F6HHF8;Derives_from=GSCOCT00023949001;Name=Cc01_g09070;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,CC_EC_number:missing_EC_number,PRODUCT:RNA-binding (RRM/RBD/RNP motifs) family protein,CC_functional_completeness:complete,CC_gene:SYNCRIP,CC_gene:Syncrip;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023949001~ RNA-binding (RRM/RBD/RNP motifs) family protein~ SYNCRIP~ complete;original_location=join(565143..565439%2C565519..565635%2C565835..565975%2C566107..566280%2C566726..566933%2C567021..567196%2C568121..568206%2C569034..569184);owner=coffea | |
| 11444 chr1 manual_curation exon 27596258 27596554 . + . Parent=GSCOCT00023949001 | |
| 11445 chr1 manual_curation exon 27596634 27596750 . + . Parent=GSCOCT00023949001 | |
| 11446 chr1 manual_curation exon 27596950 27597090 . + . Parent=GSCOCT00023949001 | |
| 11447 chr1 manual_curation exon 27597222 27597395 . + . Parent=GSCOCT00023949001 | |
| 11448 chr1 manual_curation exon 27597841 27598048 . + . Parent=GSCOCT00023949001 | |
| 11449 chr1 manual_curation exon 27598136 27598311 . + . Parent=GSCOCT00023949001 | |
| 11450 chr1 manual_curation exon 27599236 27599321 . + . Parent=GSCOCT00023949001 | |
| 11451 chr1 manual_curation exon 27600149 27600608 . + . Parent=GSCOCT00023949001 | |
| 11452 chr1 manual_curation CDS 27596258 27596554 . + 0 Parent=GSCOCT00023949001 | |
| 11453 chr1 manual_curation CDS 27596634 27596750 . + 0 Parent=GSCOCT00023949001 | |
| 11454 chr1 manual_curation CDS 27596950 27597090 . + 0 Parent=GSCOCT00023949001 | |
| 11455 chr1 manual_curation CDS 27597222 27597395 . + 0 Parent=GSCOCT00023949001 | |
| 11456 chr1 manual_curation CDS 27597841 27598048 . + 0 Parent=GSCOCT00023949001 | |
| 11457 chr1 manual_curation CDS 27598136 27598311 . + 1 Parent=GSCOCT00023949001 | |
| 11458 chr1 manual_curation CDS 27599236 27599321 . + 0 Parent=GSCOCT00023949001 | |
| 11459 chr1 manual_curation CDS 27600149 27600299 . + 2 Parent=GSCOCT00023949001 | |
| 11460 chr1 manual_curation gene 27600838 27603877 . - . ID=GSCOCG00023950001;Name=Cc01_g09080 | |
| 11461 chr1 manual_curation mRNA 27600838 27603877 . - . ID=GSCOCT00023950001;Parent=GSCOCG00023950001;Name=Cc01_g09080 | |
| 11462 chr1 manual_curation polypeptide 27601322 27603877 . - . ID=GSCOCP00023950001;Dbxref=GENE3D:G3DSA:1.10.20.10,InterPro:IPR003958,InterPro:IPR009072,PFAM:PF00808,SUPERFAMILY:SSF47113,SwissProt:Q3SZN5,SwissProt:Q5R4W3,SwissProt:Q9NRF9,TAIR:AT2G27470.1,TrEMBL:A9PCR2,TrEMBL:C6SZ53,TrEMBL:D7TCU3;Derives_from=GSCOCT00023950001;Name=Cc01_g09080;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0005622,GO:0043565,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:POLE3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023950001~ Putative uncharacterized protein~ POLE3~ fragment;original_location=complement(join(572527..572762%2C572087..572205%2C570207..570361));owner=coffea | |
| 11463 chr1 manual_curation exon 27600838 27601476 . - . Parent=GSCOCT00023950001 | |
| 11464 chr1 manual_curation exon 27603202 27603320 . - . Parent=GSCOCT00023950001 | |
| 11465 chr1 manual_curation exon 27603642 27603877 . - . Parent=GSCOCT00023950001 | |
| 11466 chr1 manual_curation CDS 27601322 27601476 . - 1 Parent=GSCOCT00023950001 | |
| 11467 chr1 manual_curation CDS 27603202 27603320 . - 2 Parent=GSCOCT00023950001 | |
| 11468 chr1 manual_curation CDS 27603642 27603877 . - 0 Parent=GSCOCT00023950001 | |
| 11469 chr1 manual_curation gene 27620466 27625939 . + . ID=GSCOCG00023953001;Name=Cc01_g09090 | |
| 11470 chr1 manual_curation mRNA 27620466 27625939 . + . ID=GSCOCT00023953001;Parent=GSCOCG00023953001;Name=Cc01_g09090 | |
| 11471 chr1 manual_curation polypeptide 27620873 27625322 . + . ID=GSCOCP00023953001;Dbxref=GENE3D:G3DSA:1.10.238.10,InterPro:IPR002048,InterPro:IPR011992,InterPro:IPR018247,InterPro:IPR018248,InterPro:IPR018249,PFAM:PF00036,PROFILE:PS50222,PROSITE:PS00018,SMART:SM00054,SwissProt:Q8W4L0,SwissProt:Q9FYE4,SwissProt:Q9ZQH1,TAIR:AT2G27480.1,TAIR:AT3G10300.3,TAIR:AT5G04170.1,TrEMBL:A5AZN0,TrEMBL:B9SCV7,TrEMBL:F6HHF9;Derives_from=GSCOCT00023953001;Name=Cc01_g09090;Ontology_term=CC_evidence_code:ISS,GO:0005509,CC_EC_number:3.4.22.53,PRODUCT:Probable calcium-binding protein CML48,CC_functional_completeness:modules,CC_gene:CML48,CC_gene:CML49,CC_gene:CML50;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023953001~ Probable calcium-binding protein CML48~ CML48~ modules;original_location=join(589758..590295%2C591481..591527%2C593580..593755%2C593871..593889%2C594100..594207);owner=coffea | |
| 11472 chr1 manual_curation exon 27620466 27621410 . + . Parent=GSCOCT00023953001 | |
| 11473 chr1 manual_curation exon 27622596 27622642 . + . Parent=GSCOCT00023953001 | |
| 11474 chr1 manual_curation exon 27624695 27624870 . + . Parent=GSCOCT00023953001 | |
| 11475 chr1 manual_curation exon 27624986 27625004 . + . Parent=GSCOCT00023953001 | |
| 11476 chr1 manual_curation exon 27625215 27625939 . + . Parent=GSCOCT00023953001 | |
| 11477 chr1 manual_curation CDS 27620873 27621410 . + 0 Parent=GSCOCT00023953001 | |
| 11478 chr1 manual_curation CDS 27622596 27622642 . + 1 Parent=GSCOCT00023953001 | |
| 11479 chr1 manual_curation CDS 27624695 27624870 . + 0 Parent=GSCOCT00023953001 | |
| 11480 chr1 manual_curation CDS 27624986 27625004 . + 2 Parent=GSCOCT00023953001 | |
| 11481 chr1 manual_curation CDS 27625215 27625322 . + 0 Parent=GSCOCT00023953001 | |
| 11482 chr1 manual_curation gene 27628316 27630532 . - . ID=GSCOCG00023954001;Name=Cc01_g09100 | |
| 11483 chr1 manual_curation mRNA 27628316 27630532 . - . ID=GSCOCT00023954001;Parent=GSCOCG00023954001;Name=Cc01_g09100 | |
| 11484 chr1 manual_curation polypeptide 27628316 27630477 . - . ID=GSCOCP00023954001;Dbxref=InterPro:IPR009395,PFAM:PF06320,SwissProt:O22929,SwissProt:P78537,SwissProt:Q5R7L8,TAIR:AT2G30330.1,TrEMBL:B9RVF7,TrEMBL:D7SJL9,TrEMBL:I1MBJ0;Derives_from=GSCOCT00023954001;Name=Cc01_g09100;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Biogenesis of lysosome-related organelles complex 1 subunit 1,CC_functional_completeness:fragment,CC_gene:BLOS1,CC_gene:BLOC1S1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023954001~ Biogenesis of lysosome-related organelles complex 1 subunit 1~ BLOS1~ fragment;original_location=complement(join(599260..599362%2C598927..599132%2C597201..597290));owner=coffea | |
| 11485 chr1 manual_curation exon 27628316 27628405 . - . Parent=GSCOCT00023954001 | |
| 11486 chr1 manual_curation exon 27630042 27630247 . - . Parent=GSCOCT00023954001 | |
| 11487 chr1 manual_curation exon 27630375 27630532 . - . Parent=GSCOCT00023954001 | |
| 11488 chr1 manual_curation CDS 27628316 27628405 . - 0 Parent=GSCOCT00023954001 | |
| 11489 chr1 manual_curation CDS 27630042 27630247 . - 1 Parent=GSCOCT00023954001 | |
| 11490 chr1 manual_curation CDS 27630375 27630477 . - 0 Parent=GSCOCT00023954001 | |
| 11491 chr1 manual_curation gene 27634056 27636821 . + . ID=GSCOCG00023955001;Name=Cc01_g09110 | |
| 11492 chr1 manual_curation mRNA 27634056 27636821 . + . ID=GSCOCT00023955001;Parent=GSCOCG00023955001;Name=Cc01_g09110 | |
| 11493 chr1 manual_curation polypeptide 27634306 27636368 . + . ID=GSCOCP00023955001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR000490,InterPro:IPR013781,InterPro:IPR017853,PFAM:PF00332,SUPERFAMILY:SSF51445,SwissProt:Q8L868,SwissProt:Q9FHX5,SwissProt:Q9ZQG9,TAIR:AT1G32860.1,TAIR:AT2G27500.1,TAIR:AT5G42100.1,TrEMBL:B9SCU1,TrEMBL:C6TH22,TrEMBL:E9N6U0;Derives_from=GSCOCT00023955001;Name=Cc01_g09110;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0043169,CC_EC_number:3.2.1.39,PRODUCT:Glucan endo-1%2C3-beta-glucosidase 14,CC_functional_completeness:complete,CC_gene:At2g27500,CC_gene:At1g32860,CC_gene:At5g42100;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023955001~ Glucan endo-1%2C3-beta-glucosidase 14~ At2g27500~ complete;original_location=join(603191..603254%2C604038..604478%2C604611..605092%2C605203..605253);owner=coffea | |
| 11494 chr1 manual_curation exon 27634056 27634369 . + . Parent=GSCOCT00023955001 | |
| 11495 chr1 manual_curation exon 27635153 27635593 . + . Parent=GSCOCT00023955001 | |
| 11496 chr1 manual_curation exon 27635726 27636207 . + . Parent=GSCOCT00023955001 | |
| 11497 chr1 manual_curation exon 27636318 27636821 . + . Parent=GSCOCT00023955001 | |
| 11498 chr1 manual_curation CDS 27634306 27634369 . + 0 Parent=GSCOCT00023955001 | |
| 11499 chr1 manual_curation CDS 27635153 27635593 . + 1 Parent=GSCOCT00023955001 | |
| 11500 chr1 manual_curation CDS 27635726 27636207 . + 1 Parent=GSCOCT00023955001 | |
| 11501 chr1 manual_curation CDS 27636318 27636368 . + 0 Parent=GSCOCT00023955001 | |
| 11502 chr1 manual_curation gene 27647263 27649208 . - . ID=GSCOCG00023956001;Name=Cc01_g09120 | |
| 11503 chr1 manual_curation mRNA 27647263 27649208 . - . ID=GSCOCT00023956001;Parent=GSCOCG00023956001;Name=Cc01_g09120 | |
| 11504 chr1 manual_curation polypeptide 27647640 27648107 . - . ID=GSCOCP00023956001;Dbxref=GENE3D:G3DSA:3.10.20.30,InterPro:IPR001041,InterPro:IPR006058,InterPro:IPR010241,InterPro:IPR012675,PFAM:PF00111,PROFILE:PS51085,PROSITE:PS00197,SUPERFAMILY:SSF54292,SwissProt:O04683,SwissProt:P27788,SwissProt:Q9ZQG8,TAIR:AT1G10960.1,TAIR:AT1G60950.1,TAIR:AT2G27510.1,TIGRFAMs:TIGR02008,TrEMBL:A5B3C7,TrEMBL:B9SCU0,TrEMBL:F6HHG1;Derives_from=GSCOCT00023956001;Name=Cc01_g09120;Ontology_term=CC_evidence_code:ISS,GO:0009055,GO:0022900,GO:0051536,CC_EC_number:1.18.1.3,PRODUCT:Ferredoxin-3%2C chloroplastic,CC_functional_completeness:complete,CC_gene:FDX3,CC_gene:FD3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023956001~ Ferredoxin-3%2C chloroplastic~ FDX3~ complete;original_location=complement(616525..616992);owner=coffea | |
| 11505 chr1 manual_curation exon 27649001 27649208 . - . Parent=GSCOCT00023956001 | |
| 11506 chr1 manual_curation exon 27647263 27648114 . - . Parent=GSCOCT00023956001 | |
| 11507 chr1 manual_curation CDS 27647640 27648107 . - 0 Parent=GSCOCT00023956001 | |
| 11508 chr1 manual_curation gene 27649662 27652669 . - . ID=GSCOCG00023957001;Name=Cc01_g09130 | |
| 11509 chr1 manual_curation mRNA 27649662 27652669 . - . ID=GSCOCT00023957001;Parent=GSCOCG00023957001;Name=Cc01_g09130 | |
| 11510 chr1 manual_curation polypeptide 27650241 27650693 . - . ID=GSCOCP00023957001;Dbxref=GENE3D:G3DSA:3.10.20.30,InterPro:IPR001041,InterPro:IPR006058,InterPro:IPR010241,InterPro:IPR012675,PFAM:PF00111,PROFILE:PS51085,PROSITE:PS00197,SUPERFAMILY:SSF54292,SwissProt:P00243,SwissProt:P27788,SwissProt:Q9ZQG8,TAIR:AT1G10960.1,TAIR:AT1G60950.1,TAIR:AT2G27510.1,TIGRFAMs:TIGR02008,TrEMBL:A5B3C7,TrEMBL:F6HHG1,TrEMBL:Q39648;Derives_from=GSCOCT00023957001;Name=Cc01_g09130;Ontology_term=CC_evidence_code:ISS,GO:0009055,GO:0022900,GO:0051536,CC_EC_number:1.18.1.3,PRODUCT:Ferredoxin-3%2C chloroplastic,CC_functional_completeness:complete,CC_gene:FDX3,CC_gene:FD3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023957001~ Ferredoxin-3%2C chloroplastic~ FDX3~ complete;original_location=complement(619126..619578);owner=coffea | |
| 11511 chr1 manual_curation exon 27652447 27652669 . - . Parent=GSCOCT00023957001 | |
| 11512 chr1 manual_curation exon 27649662 27650700 . - . Parent=GSCOCT00023957001 | |
| 11513 chr1 manual_curation CDS 27650241 27650693 . - 0 Parent=GSCOCT00023957001 | |
| 11514 chr1 manual_curation gene 27661022 27666401 . + . ID=GSCOCG00023958001;Name=Cc01_g09140 | |
| 11515 chr1 manual_curation mRNA 27661022 27666401 . + . ID=GSCOCT00023958001;Parent=GSCOCG00023958001;Name=Cc01_g09140 | |
| 11516 chr1 manual_curation polypeptide 27661135 27666354 . + . ID=GSCOCP00023958001;Dbxref=InterPro:IPR001563,PANTHER:PTHR11802,PFAM:PF00450,PRINTS:PR00724,SwissProt:Q8RWJ6,SwissProt:Q9CAU3,SwissProt:Q9SQX6,TAIR:AT1G73300.1,TAIR:AT3G10450.1,TAIR:AT5G36180.1,TrEMBL:B0I1I1,TrEMBL:C6TI63,TrEMBL:F6H185;Derives_from=GSCOCT00023958001;Name=Cc01_g09140;Ontology_term=CC_evidence_code:ISS,GO:0004185,GO:0006508,CC_EC_number:3.4.16.5,PRODUCT:Putative Serine carboxypeptidase-like 2,CC_functional_completeness:complete,CC_gene:SCPL2,CC_gene:SCPL1,CC_gene:SCPL7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023958001~ Putative Serine carboxypeptidase-like 2~ SCPL2~ complete;original_location=join(630020..630177%2C630274..630419%2C630909..630985%2C631256..631378%2C633217..633477%2C633599..633714%2C634220..634292%2C634395..634466%2C634551..634669%2C634755..634868%2C634982..635093%2C635156..635239);owner=coffea | |
| 11517 chr1 manual_curation exon 27661022 27661292 . + . Parent=GSCOCT00023958001 | |
| 11518 chr1 manual_curation exon 27661389 27661534 . + . Parent=GSCOCT00023958001 | |
| 11519 chr1 manual_curation exon 27662024 27662100 . + . Parent=GSCOCT00023958001 | |
| 11520 chr1 manual_curation exon 27662371 27662493 . + . Parent=GSCOCT00023958001 | |
| 11521 chr1 manual_curation exon 27664332 27664592 . + . Parent=GSCOCT00023958001 | |
| 11522 chr1 manual_curation exon 27664714 27664829 . + . Parent=GSCOCT00023958001 | |
| 11523 chr1 manual_curation exon 27665335 27665407 . + . Parent=GSCOCT00023958001 | |
| 11524 chr1 manual_curation exon 27665510 27665581 . + . Parent=GSCOCT00023958001 | |
| 11525 chr1 manual_curation exon 27665666 27665784 . + . Parent=GSCOCT00023958001 | |
| 11526 chr1 manual_curation exon 27665870 27665983 . + . Parent=GSCOCT00023958001 | |
| 11527 chr1 manual_curation exon 27666097 27666208 . + . Parent=GSCOCT00023958001 | |
| 11528 chr1 manual_curation exon 27666271 27666401 . + . Parent=GSCOCT00023958001 | |
| 11529 chr1 manual_curation CDS 27661135 27661292 . + 0 Parent=GSCOCT00023958001 | |
| 11530 chr1 manual_curation CDS 27661389 27661534 . + 2 Parent=GSCOCT00023958001 | |
| 11531 chr1 manual_curation CDS 27662024 27662100 . + 1 Parent=GSCOCT00023958001 | |
| 11532 chr1 manual_curation CDS 27662371 27662493 . + 0 Parent=GSCOCT00023958001 | |
| 11533 chr1 manual_curation CDS 27664332 27664592 . + 0 Parent=GSCOCT00023958001 | |
| 11534 chr1 manual_curation CDS 27664714 27664829 . + 0 Parent=GSCOCT00023958001 | |
| 11535 chr1 manual_curation CDS 27665335 27665407 . + 2 Parent=GSCOCT00023958001 | |
| 11536 chr1 manual_curation CDS 27665510 27665581 . + 0 Parent=GSCOCT00023958001 | |
| 11537 chr1 manual_curation CDS 27665666 27665784 . + 0 Parent=GSCOCT00023958001 | |
| 11538 chr1 manual_curation CDS 27665870 27665983 . + 2 Parent=GSCOCT00023958001 | |
| 11539 chr1 manual_curation CDS 27666097 27666208 . + 2 Parent=GSCOCT00023958001 | |
| 11540 chr1 manual_curation CDS 27666271 27666354 . + 0 Parent=GSCOCT00023958001 | |
| 11541 chr1 manual_curation gene 27692409 27696788 . + . ID=GSCOCG00023960001;Name=Cc01_g09150 | |
| 11542 chr1 manual_curation mRNA 27692409 27696788 . + . ID=GSCOCT00023960001;Parent=GSCOCG00023960001;Name=Cc01_g09150 | |
| 11543 chr1 manual_curation polypeptide 27692409 27696593 . + . ID=GSCOCP00023960001;Dbxref=InterPro:IPR001563,PANTHER:PTHR11802,PFAM:PF00450,SwissProt:Q8RWJ6,SwissProt:Q8VZU3,SwissProt:Q9CAU3,TAIR:AT1G73300.1,TAIR:AT5G09640.1,TAIR:AT5G36180.1,TrEMBL:B9N607,TrEMBL:I1K876,TrEMBL:I1K879;Derives_from=GSCOCT00023960001;Name=Cc01_g09150;Ontology_term=CC_evidence_code:ISS,GO:0004185,GO:0006508,CC_EC_number:3.4.16.5,PRODUCT:Serine carboxypeptidase-like 19,CC_functional_completeness:fragment,CC_gene:SCPL19,CC_gene:SCPL2,CC_gene:SCPL1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023960001~ Serine carboxypeptidase-like 19~ SCPL19~ fragment;original_location=join(661294..661314%2C664382..664499%2C664976..665013%2C665136..665237%2C665359..665478);owner=coffea | |
| 11544 chr1 manual_curation exon 27692409 27692429 . + . Parent=GSCOCT00023960001 | |
| 11545 chr1 manual_curation exon 27695497 27695614 . + . Parent=GSCOCT00023960001 | |
| 11546 chr1 manual_curation exon 27696091 27696128 . + . Parent=GSCOCT00023960001 | |
| 11547 chr1 manual_curation exon 27696251 27696352 . + . Parent=GSCOCT00023960001 | |
| 11548 chr1 manual_curation exon 27696474 27696788 . + . Parent=GSCOCT00023960001 | |
| 11549 chr1 manual_curation CDS 27692409 27692429 . + 0 Parent=GSCOCT00023960001 | |
| 11550 chr1 manual_curation CDS 27695497 27695614 . + 0 Parent=GSCOCT00023960001 | |
| 11551 chr1 manual_curation CDS 27696091 27696128 . + 1 Parent=GSCOCT00023960001 | |
| 11552 chr1 manual_curation CDS 27696251 27696352 . + 0 Parent=GSCOCT00023960001 | |
| 11553 chr1 manual_curation CDS 27696474 27696593 . + 0 Parent=GSCOCT00023960001 | |
| 11554 chr1 manual_curation gene 27696926 27698235 . + . ID=GSCOCG00023961001;Name=Cc01_g09160 | |
| 11555 chr1 manual_curation mRNA 27696926 27698235 . + . ID=GSCOCT00023961001;Parent=GSCOCG00023961001;Name=Cc01_g09160 | |
| 11556 chr1 manual_curation polypeptide 27696926 27698059 . + . ID=GSCOCP00023961001;Dbxref=InterPro:IPR001563,PANTHER:PTHR11802,PFAM:PF00450,SwissProt:Q8RWJ6,SwissProt:Q9C7Z9,SwissProt:Q9CAU3,TAIR:AT1G73280.1,TAIR:AT1G73300.1,TAIR:AT5G36180.1,TrEMBL:B0I1I0,TrEMBL:B0I1I1,TrEMBL:F6H185;Derives_from=GSCOCT00023961001;Name=Cc01_g09160;Ontology_term=CC_evidence_code:ISS,GO:0004185,GO:0006508,CC_EC_number:3.4.16.5,PRODUCT:Putative Serine carboxypeptidase-like 18,CC_functional_completeness:fragment,CC_gene:SCPL2,CC_gene:SCPL18,CC_gene:SCPL1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023961001~ Putative Serine carboxypeptidase-like 18~ SCPL2~ fragment;original_location=join(665811..665999%2C666101..666172%2C666257..666375%2C666461..666574%2C666688..666772%2C666861..666944);owner=coffea | |
| 11557 chr1 manual_curation exon 27696926 27697114 . + . Parent=GSCOCT00023961001 | |
| 11558 chr1 manual_curation exon 27697216 27697287 . + . Parent=GSCOCT00023961001 | |
| 11559 chr1 manual_curation exon 27697372 27697490 . + . Parent=GSCOCT00023961001 | |
| 11560 chr1 manual_curation exon 27697576 27697689 . + . Parent=GSCOCT00023961001 | |
| 11561 chr1 manual_curation exon 27697803 27697887 . + . Parent=GSCOCT00023961001 | |
| 11562 chr1 manual_curation exon 27697976 27698235 . + . Parent=GSCOCT00023961001 | |
| 11563 chr1 manual_curation CDS 27696926 27697114 . + 0 Parent=GSCOCT00023961001 | |
| 11564 chr1 manual_curation CDS 27697216 27697287 . + 0 Parent=GSCOCT00023961001 | |
| 11565 chr1 manual_curation CDS 27697372 27697490 . + 0 Parent=GSCOCT00023961001 | |
| 11566 chr1 manual_curation CDS 27697576 27697689 . + 2 Parent=GSCOCT00023961001 | |
| 11567 chr1 manual_curation CDS 27697803 27697887 . + 2 Parent=GSCOCT00023961001 | |
| 11568 chr1 manual_curation CDS 27697976 27698059 . + 0 Parent=GSCOCT00023961001 | |
| 11569 chr1 manual_curation gene 27704552 27705287 . + . ID=GSCOCG00023962001;Name=Cc01_g09170 | |
| 11570 chr1 manual_curation mRNA 27704552 27705287 . + . ID=GSCOCT00023962001;Parent=GSCOCG00023962001;Name=Cc01_g09170 | |
| 11571 chr1 manual_curation polypeptide 27704552 27705287 . + . ID=GSCOCP00023962001;Dbxref=InterPro:IPR000730,InterPro:IPR022648,InterPro:IPR022649,InterPro:IPR022659,PANTHER:PTHR11352,PFAM:PF00705,PFAM:PF02747,PRINTS:PR00339,PROSITE:PS00293,PROSITE:PS01251,SwissProt:O82134,SwissProt:O82797,SwissProt:Q00268,TAIR:AT1G07370.1,TAIR:AT2G29570.1,TIGRFAMs:TIGR00590,TrEMBL:A5B6U5,TrEMBL:Q8H0Q1,TrEMBL:Q9FUI4;Derives_from=GSCOCT00023962001;Name=Cc01_g09170;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0006275,GO:0030337,GO:0043626,CC_EC_number:missing_EC_number,PRODUCT:Proliferating cell nuclear antigen,CC_functional_completeness:complete,CC_gene:PCNA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023962001~ Proliferating cell nuclear antigen~ PCNA~ complete;original_location=join(673437..673953%2C674012..674172);owner=coffea | |
| 11572 chr1 manual_curation exon 27704552 27705068 . + . Parent=GSCOCT00023962001 | |
| 11573 chr1 manual_curation exon 27705127 27705287 . + . Parent=GSCOCT00023962001 | |
| 11574 chr1 manual_curation CDS 27704552 27705068 . + 0 Parent=GSCOCT00023962001 | |
| 11575 chr1 manual_curation CDS 27705127 27705287 . + 1 Parent=GSCOCT00023962001 | |
| 11576 chr1 manual_curation gene 27731734 27733436 . + . ID=GSCOCG00023964001;Name=Cc01_g09180 | |
| 11577 chr1 manual_curation mRNA 27731734 27733436 . + . ID=GSCOCT00023964001;Parent=GSCOCG00023964001;Name=Cc01_g09180 | |
| 11578 chr1 manual_curation polypeptide 27731734 27733273 . + . ID=GSCOCP00023964001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,PROSITE:PS00375,SwissProt:O22820,SwissProt:O22822,SwissProt:P0C7P7,TAIR:AT1G05675.1,TAIR:AT2G43820.1,TAIR:AT2G43840.2,TrEMBL:B9T2H3,TrEMBL:C6KI44,TrEMBL:F6HRI4;Derives_from=GSCOCT00023964001;Name=Cc01_g09180;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.121,PRODUCT:Putative UDP-glycosyltransferase 74F1,CC_functional_completeness:complete,CC_gene:UGT74F1,CC_gene:UGT74F2,CC_gene:UGT74E1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023964001~ Putative UDP-glycosyltransferase 74F1~ UGT74F1~ complete;original_location=join(700619..701260%2C701424..702158);owner=coffea | |
| 11579 chr1 manual_curation exon 27731734 27732375 . + . Parent=GSCOCT00023964001 | |
| 11580 chr1 manual_curation exon 27732539 27733436 . + . Parent=GSCOCT00023964001 | |
| 11581 chr1 manual_curation CDS 27731734 27732375 . + 0 Parent=GSCOCT00023964001 | |
| 11582 chr1 manual_curation CDS 27732539 27733273 . + 0 Parent=GSCOCT00023964001 | |
| 11583 chr1 manual_curation gene 27741179 27742751 . - . ID=GSCOCG00023966001;Name=Cc01_g09190 | |
| 11584 chr1 manual_curation mRNA 27741179 27742751 . - . ID=GSCOCT00023966001;Parent=GSCOCG00023966001;Name=Cc01_g09190 | |
| 11585 chr1 manual_curation polypeptide 27741179 27742575 . - . ID=GSCOCP00023966001;Dbxref=InterPro:IPR003480,PFAM:PF02458,SwissProt:Q70PR7,SwissProt:Q94FT4,SwissProt:Q9FI40,TAIR:AT1G24420.1,TAIR:AT3G26040.1,TAIR:AT3G30280.1,TrEMBL:B9GQ16,TrEMBL:B9R8I4,TrEMBL:B9RML4;Derives_from=GSCOCT00023966001;Name=Cc01_g09190;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.3.1.150,PRODUCT:Putative BAHD acyltransferase At5g47980,CC_functional_completeness:fragment,CC_gene:BAHD1,CC_gene:ACT,CC_gene:SALAT;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023966001~ Putative BAHD acyltransferase At5g47980~ BAHD1~ fragment;original_location=complement(join(711412..711460%2C710064..710875));owner=coffea | |
| 11586 chr1 manual_curation exon 27741179 27741990 . - . Parent=GSCOCT00023966001 | |
| 11587 chr1 manual_curation exon 27742527 27742751 . - . Parent=GSCOCT00023966001 | |
| 11588 chr1 manual_curation CDS 27741179 27741990 . - 1 Parent=GSCOCT00023966001 | |
| 11589 chr1 manual_curation CDS 27742527 27742575 . - 0 Parent=GSCOCT00023966001 | |
| 11590 chr1 manual_curation gene 27750520 27754809 . + . ID=GSCOCG00023967001;Name=Cc01_g09200 | |
| 11591 chr1 manual_curation mRNA 27750520 27754809 . + . ID=GSCOCT00023967001;Parent=GSCOCG00023967001;Name=Cc01_g09200 | |
| 11592 chr1 manual_curation polypeptide 27750618 27754809 . + . ID=GSCOCP00023967001;Dbxref=InterPro:IPR001563,PANTHER:PTHR11802,PFAM:PF00450,PRINTS:PR00724,SwissProt:Q8VZU3,SwissProt:Q9CAU3,SwissProt:Q9SQX6,TAIR:AT1G73300.1,TAIR:AT3G10450.1,TAIR:AT5G09640.1,TrEMBL:B0I1H7,TrEMBL:B9N606,TrEMBL:F6H185;Derives_from=GSCOCT00023967001;Name=Cc01_g09200;Ontology_term=CC_evidence_code:ISS,GO:0004185,GO:0006508,CC_EC_number:3.4.16.5,PRODUCT:Serine carboxypeptidase-like 19,CC_functional_completeness:fragment,CC_gene:SCPL19,CC_gene:SCPL2,CC_gene:SCPL7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023967001~ Serine carboxypeptidase-like 19~ SCPL19~ fragment;original_location=join(719503..719660%2C719757..719902%2C720432..720508%2C720793..720915%2C721695..721797%2C723163..723200%2C723322..723423%2C723545..723694);owner=coffea | |
| 11593 chr1 manual_curation exon 27750520 27750775 . + . Parent=GSCOCT00023967001 | |
| 11594 chr1 manual_curation exon 27750872 27751017 . + . Parent=GSCOCT00023967001 | |
| 11595 chr1 manual_curation exon 27751547 27751623 . + . Parent=GSCOCT00023967001 | |
| 11596 chr1 manual_curation exon 27751908 27752030 . + . Parent=GSCOCT00023967001 | |
| 11597 chr1 manual_curation exon 27752810 27752912 . + . Parent=GSCOCT00023967001 | |
| 11598 chr1 manual_curation exon 27754278 27754315 . + . Parent=GSCOCT00023967001 | |
| 11599 chr1 manual_curation exon 27754437 27754538 . + . Parent=GSCOCT00023967001 | |
| 11600 chr1 manual_curation exon 27754660 27754809 . + . Parent=GSCOCT00023967001 | |
| 11601 chr1 manual_curation CDS 27750618 27750775 . + 0 Parent=GSCOCT00023967001 | |
| 11602 chr1 manual_curation CDS 27750872 27751017 . + 2 Parent=GSCOCT00023967001 | |
| 11603 chr1 manual_curation CDS 27751547 27751623 . + 1 Parent=GSCOCT00023967001 | |
| 11604 chr1 manual_curation CDS 27751908 27752030 . + 0 Parent=GSCOCT00023967001 | |
| 11605 chr1 manual_curation CDS 27752810 27752912 . + 0 Parent=GSCOCT00023967001 | |
| 11606 chr1 manual_curation CDS 27754278 27754315 . + 1 Parent=GSCOCT00023967001 | |
| 11607 chr1 manual_curation CDS 27754437 27754538 . + 0 Parent=GSCOCT00023967001 | |
| 11608 chr1 manual_curation CDS 27754660 27754809 . + 0 Parent=GSCOCT00023967001 | |
| 11609 chr1 manual_curation gene 27755027 27756455 . + . ID=GSCOCG00023968001;Name=Cc01_g09210 | |
| 11610 chr1 manual_curation mRNA 27755027 27756455 . + . ID=GSCOCT00023968001;Parent=GSCOCG00023968001;Name=Cc01_g09210 | |
| 11611 chr1 manual_curation polypeptide 27755027 27756207 . + . ID=GSCOCP00023968001;Dbxref=InterPro:IPR001563,PANTHER:PTHR11802,PFAM:PF00450,SwissProt:Q8S8P0,SwissProt:Q9C7Z9,SwissProt:Q9CAU3,TAIR:AT1G73300.1,TAIR:AT2G22960.1,TAIR:AT2G23000.1,TrEMBL:B0I1I0,TrEMBL:B0I1I1,TrEMBL:F6H185;Derives_from=GSCOCT00023968001;Name=Cc01_g09210;Ontology_term=CC_evidence_code:ISS,GO:0004185,GO:0006508,CC_EC_number:3.4.16.5,PRODUCT:Putative serine carboxypeptidase-like 10,CC_functional_completeness:fragment,CC_gene:SCPL18,CC_gene:SCPL52,CC_gene:SCPL2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023968001~ Putative serine carboxypeptidase-like 10~ SCPL18~ fragment;original_location=join(723912..724010%2C724074..724238%2C724340..724411%2C724493..724611%2C724697..724810%2C724924..725092);owner=coffea | |
| 11612 chr1 manual_curation exon 27755027 27755125 . + . Parent=GSCOCT00023968001 | |
| 11613 chr1 manual_curation exon 27755189 27755353 . + . Parent=GSCOCT00023968001 | |
| 11614 chr1 manual_curation exon 27755455 27755526 . + . Parent=GSCOCT00023968001 | |
| 11615 chr1 manual_curation exon 27755608 27755726 . + . Parent=GSCOCT00023968001 | |
| 11616 chr1 manual_curation exon 27755812 27755925 . + . Parent=GSCOCT00023968001 | |
| 11617 chr1 manual_curation exon 27756039 27756455 . + . Parent=GSCOCT00023968001 | |
| 11618 chr1 manual_curation CDS 27755027 27755125 . + 0 Parent=GSCOCT00023968001 | |
| 11619 chr1 manual_curation CDS 27755189 27755353 . + 0 Parent=GSCOCT00023968001 | |
| 11620 chr1 manual_curation CDS 27755455 27755526 . + 0 Parent=GSCOCT00023968001 | |
| 11621 chr1 manual_curation CDS 27755608 27755726 . + 0 Parent=GSCOCT00023968001 | |
| 11622 chr1 manual_curation CDS 27755812 27755925 . + 2 Parent=GSCOCT00023968001 | |
| 11623 chr1 manual_curation CDS 27756039 27756207 . + 2 Parent=GSCOCT00023968001 | |
| 11624 chr1 manual_curation gene 27765099 27768363 . + . ID=GSCOCG00023969001;Name=Cc01_g09220 | |
| 11625 chr1 manual_curation mRNA 27765099 27768363 . + . ID=GSCOCT00023969001;Parent=GSCOCG00023969001;Name=Cc01_g09220 | |
| 11626 chr1 manual_curation polypeptide 27765099 27768363 . + . ID=GSCOCP00023969001;Dbxref=InterPro:IPR001563,PANTHER:PTHR11802,PFAM:PF00450,PRINTS:PR00724,SwissProt:O64811,SwissProt:Q8VZU3,SwissProt:Q9CAU3,TAIR:AT1G73300.1,TAIR:AT2G23010.2,TAIR:AT5G09640.1,TrEMBL:B9N606,TrEMBL:B9R6Y4,TrEMBL:F6H185;Derives_from=GSCOCT00023969001;Name=Cc01_g09220;Ontology_term=CC_evidence_code:ISS,GO:0004185,GO:0006508,CC_EC_number:3.4.16.5,PRODUCT:Serine carboxypeptidase-like 19,CC_functional_completeness:fragment,CC_gene:SCPL19,CC_gene:SCPL2,CC_gene:SCPL9;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023969001~ Serine carboxypeptidase-like 19~ SCPL19~ fragment;original_location=join(733984..734300%2C734397..734542%2C734890..734966%2C735211..735333%2C736152..736254%2C736729..736766%2C736888..736989%2C737111..737248);owner=coffea | |
| 11627 chr1 manual_curation exon 27765099 27765415 . + . Parent=GSCOCT00023969001 | |
| 11628 chr1 manual_curation exon 27765512 27765657 . + . Parent=GSCOCT00023969001 | |
| 11629 chr1 manual_curation exon 27766005 27766081 . + . Parent=GSCOCT00023969001 | |
| 11630 chr1 manual_curation exon 27766326 27766448 . + . Parent=GSCOCT00023969001 | |
| 11631 chr1 manual_curation exon 27767267 27767369 . + . Parent=GSCOCT00023969001 | |
| 11632 chr1 manual_curation exon 27767844 27767881 . + . Parent=GSCOCT00023969001 | |
| 11633 chr1 manual_curation exon 27768003 27768104 . + . Parent=GSCOCT00023969001 | |
| 11634 chr1 manual_curation exon 27768226 27768363 . + . Parent=GSCOCT00023969001 | |
| 11635 chr1 manual_curation CDS 27765099 27765415 . + 0 Parent=GSCOCT00023969001 | |
| 11636 chr1 manual_curation CDS 27765512 27765657 . + 2 Parent=GSCOCT00023969001 | |
| 11637 chr1 manual_curation CDS 27766005 27766081 . + 1 Parent=GSCOCT00023969001 | |
| 11638 chr1 manual_curation CDS 27766326 27766448 . + 0 Parent=GSCOCT00023969001 | |
| 11639 chr1 manual_curation CDS 27767267 27767369 . + 0 Parent=GSCOCT00023969001 | |
| 11640 chr1 manual_curation CDS 27767844 27767881 . + 1 Parent=GSCOCT00023969001 | |
| 11641 chr1 manual_curation CDS 27768003 27768104 . + 0 Parent=GSCOCT00023969001 | |
| 11642 chr1 manual_curation CDS 27768226 27768363 . + 0 Parent=GSCOCT00023969001 | |
| 11643 chr1 manual_curation gene 27768525 27770123 . + . ID=GSCOCG00023970001;Name=Cc01_g09230 | |
| 11644 chr1 manual_curation mRNA 27768525 27770123 . + . ID=GSCOCT00023970001;Parent=GSCOCG00023970001;Name=Cc01_g09230 | |
| 11645 chr1 manual_curation polypeptide 27768525 27769797 . + . ID=GSCOCP00023970001;Dbxref=InterPro:IPR001563,PANTHER:PTHR11802,PFAM:PF00450,SwissProt:Q8RWJ6,SwissProt:Q9C7Z9,SwissProt:Q9CAU3,TAIR:AT1G73280.1,TAIR:AT1G73300.1,TAIR:AT5G36180.1,TrEMBL:B0I1I0,TrEMBL:B0I1I1,TrEMBL:F6H185;Derives_from=GSCOCT00023970001;Name=Cc01_g09230;Ontology_term=CC_evidence_code:ISS,GO:0004185,GO:0006508,CC_EC_number:3.4.16.5,PRODUCT:Putative Peptidase S10%2C serine carboxypeptidase,CC_functional_completeness:complete,CC_gene:SCPL18,CC_gene:SCPL2,CC_gene:SCPL1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023970001~ Putative Peptidase S10%2C serine carboxypeptidase~ SCPL18~ complete;original_location=join(737410..737469%2C737642..737803%2C737906..737977%2C738062..738180%2C738266..738379%2C738493..738682);owner=coffea | |
| 11646 chr1 manual_curation exon 27768525 27768584 . + . Parent=GSCOCT00023970001 | |
| 11647 chr1 manual_curation exon 27768757 27768918 . + . Parent=GSCOCT00023970001 | |
| 11648 chr1 manual_curation exon 27769021 27769092 . + . Parent=GSCOCT00023970001 | |
| 11649 chr1 manual_curation exon 27769177 27769295 . + . Parent=GSCOCT00023970001 | |
| 11650 chr1 manual_curation exon 27769381 27769494 . + . Parent=GSCOCT00023970001 | |
| 11651 chr1 manual_curation exon 27769608 27770123 . + . Parent=GSCOCT00023970001 | |
| 11652 chr1 manual_curation CDS 27768525 27768584 . + 0 Parent=GSCOCT00023970001 | |
| 11653 chr1 manual_curation CDS 27768757 27768918 . + 0 Parent=GSCOCT00023970001 | |
| 11654 chr1 manual_curation CDS 27769021 27769092 . + 0 Parent=GSCOCT00023970001 | |
| 11655 chr1 manual_curation CDS 27769177 27769295 . + 0 Parent=GSCOCT00023970001 | |
| 11656 chr1 manual_curation CDS 27769381 27769494 . + 2 Parent=GSCOCT00023970001 | |
| 11657 chr1 manual_curation CDS 27769608 27769797 . + 2 Parent=GSCOCT00023970001 | |
| 11658 chr1 manual_curation gene 27812357 27820459 . + . ID=GSCOCG00023971001;Name=Cc01_g09240 | |
| 11659 chr1 manual_curation mRNA 27812357 27820459 . + . ID=GSCOCT00023971001;Parent=GSCOCG00023971001;Name=Cc01_g09240 | |
| 11660 chr1 manual_curation polypeptide 27812357 27820263 . + . ID=GSCOCP00023971001;Dbxref=InterPro:IPR001563,PANTHER:PTHR11802,PFAM:PF00450,PRINTS:PR00724,SwissProt:Q8RWJ6,SwissProt:Q8VZU3,SwissProt:Q9CAU3,TAIR:AT1G73300.1,TAIR:AT5G09640.1,TAIR:AT5G36180.1,TrEMBL:B0I1H8,TrEMBL:B9N606,TrEMBL:F6H185;Derives_from=GSCOCT00023971001;Name=Cc01_g09240;Ontology_term=CC_evidence_code:ISS,GO:0004185,GO:0006508,CC_EC_number:3.4.16.5,PRODUCT:Serine carboxypeptidase-like 2,CC_functional_completeness:complete,CC_gene:SCPL2,CC_gene:SCPL1,CC_gene:SCPL19;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023971001~ Serine carboxypeptidase-like 2~ SCPL2~ complete;original_location=join(781242..781307%2C781363..781399%2C781525..781668%2C782135..782211%2C782487..782609%2C783452..783554%2C787216..787253%2C787375..787476%2C787598..787713%2C788191..788284%2C788393..788464%2C788549..788667%2C788753..788866%2C788980..789148);owner=coffea | |
| 11661 chr1 manual_curation exon 27812357 27812422 . + . Parent=GSCOCT00023971001 | |
| 11662 chr1 manual_curation exon 27812478 27812514 . + . Parent=GSCOCT00023971001 | |
| 11663 chr1 manual_curation exon 27812640 27812783 . + . Parent=GSCOCT00023971001 | |
| 11664 chr1 manual_curation exon 27813250 27813326 . + . Parent=GSCOCT00023971001 | |
| 11665 chr1 manual_curation exon 27813602 27813724 . + . Parent=GSCOCT00023971001 | |
| 11666 chr1 manual_curation exon 27814567 27814669 . + . Parent=GSCOCT00023971001 | |
| 11667 chr1 manual_curation exon 27818331 27818368 . + . Parent=GSCOCT00023971001 | |
| 11668 chr1 manual_curation exon 27818490 27818591 . + . Parent=GSCOCT00023971001 | |
| 11669 chr1 manual_curation exon 27818713 27818828 . + . Parent=GSCOCT00023971001 | |
| 11670 chr1 manual_curation exon 27819306 27819399 . + . Parent=GSCOCT00023971001 | |
| 11671 chr1 manual_curation exon 27819508 27819579 . + . Parent=GSCOCT00023971001 | |
| 11672 chr1 manual_curation exon 27819664 27819782 . + . Parent=GSCOCT00023971001 | |
| 11673 chr1 manual_curation exon 27819868 27819981 . + . Parent=GSCOCT00023971001 | |
| 11674 chr1 manual_curation exon 27820095 27820459 . + . Parent=GSCOCT00023971001 | |
| 11675 chr1 manual_curation CDS 27812357 27812422 . + 0 Parent=GSCOCT00023971001 | |
| 11676 chr1 manual_curation CDS 27812478 27812514 . + 0 Parent=GSCOCT00023971001 | |
| 11677 chr1 manual_curation CDS 27812640 27812783 . + 1 Parent=GSCOCT00023971001 | |
| 11678 chr1 manual_curation CDS 27813250 27813326 . + 1 Parent=GSCOCT00023971001 | |
| 11679 chr1 manual_curation CDS 27813602 27813724 . + 0 Parent=GSCOCT00023971001 | |
| 11680 chr1 manual_curation CDS 27814567 27814669 . + 0 Parent=GSCOCT00023971001 | |
| 11681 chr1 manual_curation CDS 27818331 27818368 . + 1 Parent=GSCOCT00023971001 | |
| 11682 chr1 manual_curation CDS 27818490 27818591 . + 0 Parent=GSCOCT00023971001 | |
| 11683 chr1 manual_curation CDS 27818713 27818828 . + 0 Parent=GSCOCT00023971001 | |
| 11684 chr1 manual_curation CDS 27819306 27819399 . + 2 Parent=GSCOCT00023971001 | |
| 11685 chr1 manual_curation CDS 27819508 27819579 . + 0 Parent=GSCOCT00023971001 | |
| 11686 chr1 manual_curation CDS 27819664 27819782 . + 0 Parent=GSCOCT00023971001 | |
| 11687 chr1 manual_curation CDS 27819868 27819981 . + 2 Parent=GSCOCT00023971001 | |
| 11688 chr1 manual_curation CDS 27820095 27820263 . + 2 Parent=GSCOCT00023971001 | |
| 11689 chr1 manual_curation gene 27841272 27867169 . + . ID=GSCOCG00023972001;Name=Cc01_g09250 | |
| 11690 chr1 manual_curation mRNA 27841272 27867169 . + . ID=GSCOCT00023972001;Parent=GSCOCG00023972001;Name=Cc01_g09250 | |
| 11691 chr1 manual_curation polypeptide 27841272 27866986 . + . ID=GSCOCP00023972001;Dbxref=InterPro:IPR001563,PANTHER:PTHR11802,PFAM:PF00450,PRINTS:PR00724,SwissProt:Q8RWJ6,SwissProt:Q9CAU1,SwissProt:Q9CAU3,TAIR:AT1G73280.1,TAIR:AT1G73300.1,TAIR:AT5G36180.1,TrEMBL:B0I1H8,TrEMBL:G7ILY5,TrEMBL:I1K876;Derives_from=GSCOCT00023972001;Name=Cc01_g09250;Ontology_term=CC_evidence_code:ISS,GO:0004185,GO:0006508,CC_EC_number:3.4.16.5,PRODUCT:Serine carboxypeptidase-like 2,CC_functional_completeness:complete,CC_gene:SCPL2,CC_gene:SCPL1,CC_gene:SCPL3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023972001~ Serine carboxypeptidase-like 2~ SCPL2~ complete;original_location=join(810157..810419%2C810516..810661%2C811175..811251%2C811524..811646%2C812681..812783%2C813259..813296%2C813418..813519%2C813641..813756%2C835072..835099%2C835184..835302%2C835388..835501%2C835615..835654%2C835788..835871);owner=coffea | |
| 11692 chr1 manual_curation exon 27841272 27841534 . + . Parent=GSCOCT00023972001 | |
| 11693 chr1 manual_curation exon 27841631 27841776 . + . Parent=GSCOCT00023972001 | |
| 11694 chr1 manual_curation exon 27842290 27842366 . + . Parent=GSCOCT00023972001 | |
| 11695 chr1 manual_curation exon 27842639 27842761 . + . Parent=GSCOCT00023972001 | |
| 11696 chr1 manual_curation exon 27843796 27843898 . + . Parent=GSCOCT00023972001 | |
| 11697 chr1 manual_curation exon 27844374 27844411 . + . Parent=GSCOCT00023972001 | |
| 11698 chr1 manual_curation exon 27844533 27844634 . + . Parent=GSCOCT00023972001 | |
| 11699 chr1 manual_curation exon 27844756 27844871 . + . Parent=GSCOCT00023972001 | |
| 11700 chr1 manual_curation exon 27866187 27866214 . + . Parent=GSCOCT00023972001 | |
| 11701 chr1 manual_curation exon 27866299 27866417 . + . Parent=GSCOCT00023972001 | |
| 11702 chr1 manual_curation exon 27866503 27866616 . + . Parent=GSCOCT00023972001 | |
| 11703 chr1 manual_curation exon 27866730 27866769 . + . Parent=GSCOCT00023972001 | |
| 11704 chr1 manual_curation exon 27866903 27867169 . + . Parent=GSCOCT00023972001 | |
| 11705 chr1 manual_curation CDS 27841272 27841534 . + 0 Parent=GSCOCT00023972001 | |
| 11706 chr1 manual_curation CDS 27841631 27841776 . + 2 Parent=GSCOCT00023972001 | |
| 11707 chr1 manual_curation CDS 27842290 27842366 . + 1 Parent=GSCOCT00023972001 | |
| 11708 chr1 manual_curation CDS 27842639 27842761 . + 0 Parent=GSCOCT00023972001 | |
| 11709 chr1 manual_curation CDS 27843796 27843898 . + 0 Parent=GSCOCT00023972001 | |
| 11710 chr1 manual_curation CDS 27844374 27844411 . + 1 Parent=GSCOCT00023972001 | |
| 11711 chr1 manual_curation CDS 27844533 27844634 . + 0 Parent=GSCOCT00023972001 | |
| 11712 chr1 manual_curation CDS 27844756 27844871 . + 0 Parent=GSCOCT00023972001 | |
| 11713 chr1 manual_curation CDS 27866187 27866214 . + 2 Parent=GSCOCT00023972001 | |
| 11714 chr1 manual_curation CDS 27866299 27866417 . + 0 Parent=GSCOCT00023972001 | |
| 11715 chr1 manual_curation CDS 27866503 27866616 . + 2 Parent=GSCOCT00023972001 | |
| 11716 chr1 manual_curation CDS 27866730 27866769 . + 2 Parent=GSCOCT00023972001 | |
| 11717 chr1 manual_curation CDS 27866903 27866986 . + 0 Parent=GSCOCT00023972001 | |
| 11718 chr1 manual_curation gene 27867218 27871249 . - . ID=GSCOCG00023973001;Name=Cc01_g09260 | |
| 11719 chr1 manual_curation mRNA 27867218 27871249 . - . ID=GSCOCT00023973001;Parent=GSCOCG00023973001;Name=Cc01_g09260 | |
| 11720 chr1 manual_curation polypeptide 27867475 27871073 . - . ID=GSCOCP00023973001;Dbxref=GENE3D:G3DSA:1.20.5.260,InterPro:IPR008027,PANTHER:PTHR12980,PFAM:PF05365,SUPERFAMILY:SSF81514,SwissProt:P46270,TAIR:AT3G52730.1,TrEMBL:A9P8V2,TrEMBL:D7TJ67,TrEMBL:I1NAN2;Derives_from=GSCOCT00023973001;Name=Cc01_g09260;Ontology_term=CC_evidence_code:ISS,GO:0005740,GO:0008121,CC_EC_number:missing_EC_number,PRODUCT:Cytochrome b-c1 complex subunit 9,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023973001~ Cytochrome b-c1 complex subunit 9~ unknown_gene~ complete;original_location=complement(join(839833..839958%2C839569..839616%2C836360..836407));owner=coffea | |
| 11721 chr1 manual_curation exon 27867218 27867522 . - . Parent=GSCOCT00023973001 | |
| 11722 chr1 manual_curation exon 27870684 27870731 . - . Parent=GSCOCT00023973001 | |
| 11723 chr1 manual_curation exon 27870948 27871249 . - . Parent=GSCOCT00023973001 | |
| 11724 chr1 manual_curation CDS 27867475 27867522 . - 0 Parent=GSCOCT00023973001 | |
| 11725 chr1 manual_curation CDS 27870684 27870731 . - 0 Parent=GSCOCT00023973001 | |
| 11726 chr1 manual_curation CDS 27870948 27871073 . - 0 Parent=GSCOCT00023973001 | |
| 11727 chr1 manual_curation gene 27875625 27876369 . - . ID=GSCOCG00023975001;Name=Cc01_g09270 | |
| 11728 chr1 manual_curation mRNA 27875625 27876369 . - . ID=GSCOCT00023975001;Parent=GSCOCG00023975001;Name=Cc01_g09270 | |
| 11729 chr1 manual_curation polypeptide 27875625 27876369 . - . ID=GSCOCP00023975001;Dbxref=TAIR:AT3G44450.1,TAIR:AT3G52740.1,TrEMBL:A9PFK9,TrEMBL:B9MYX1,TrEMBL:B9MYX2;Derives_from=GSCOCT00023975001;Name=Cc01_g09270;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Predicted protein (Fragment),CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023975001~ Predicted protein (Fragment)~ unknown_gene~ modules;original_location=complement(join(845014..845254%2C844510..844595));owner=coffea | |
| 11730 chr1 manual_curation exon 27875625 27875710 . - . Parent=GSCOCT00023975001 | |
| 11731 chr1 manual_curation exon 27876129 27876369 . - . Parent=GSCOCT00023975001 | |
| 11732 chr1 manual_curation CDS 27875625 27875710 . - 1 Parent=GSCOCT00023975001 | |
| 11733 chr1 manual_curation CDS 27876129 27876369 . - 0 Parent=GSCOCT00023975001 | |
| 11734 chr1 manual_curation gene 27878566 27884591 . - . ID=GSCOCG00023977001;Name=Cc01_g09280 | |
| 11735 chr1 manual_curation mRNA 27878566 27884591 . - . ID=GSCOCT00023977001;Parent=GSCOCG00023977001;Name=Cc01_g09280 | |
| 11736 chr1 manual_curation polypeptide 27878681 27884456 . - . ID=GSCOCP00023977001;Dbxref=InterPro:IPR004240,PANTHER:PTHR10766,PFAM:PF02990,SwissProt:A4IFE9,SwissProt:Q54ZW0,SwissProt:Q9DBU0,TAIR:AT1G08350.2,TAIR:AT2G01970.1,TAIR:AT5G37310.1,TrEMBL:A5AWV8,TrEMBL:B9MYX4,TrEMBL:F6HHG3;Derives_from=GSCOCT00023977001;Name=Cc01_g09280;Ontology_term=CC_evidence_code:ISS,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Putative phagocytic receptor 1b,CC_functional_completeness:complete,CC_gene:phg1b,CC_gene:Tm9sf1,CC_gene:TM9SF1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023977001~ Putative phagocytic receptor 1b~ phg1b~ complete;original_location=complement(join(853199..853341%2C851665..851705%2C850929..851517%2C850654..850785%2C849154..849310%2C848588..849072%2C847566..847782));owner=coffea | |
| 11737 chr1 manual_curation exon 27878566 27878897 . - . Parent=GSCOCT00023977001 | |
| 11738 chr1 manual_curation exon 27879703 27880187 . - . Parent=GSCOCT00023977001 | |
| 11739 chr1 manual_curation exon 27880269 27880425 . - . Parent=GSCOCT00023977001 | |
| 11740 chr1 manual_curation exon 27881769 27881900 . - . Parent=GSCOCT00023977001 | |
| 11741 chr1 manual_curation exon 27882044 27882632 . - . Parent=GSCOCT00023977001 | |
| 11742 chr1 manual_curation exon 27882780 27882820 . - . Parent=GSCOCT00023977001 | |
| 11743 chr1 manual_curation exon 27884314 27884591 . - . Parent=GSCOCT00023977001 | |
| 11744 chr1 manual_curation CDS 27878681 27878897 . - 2 Parent=GSCOCT00023977001 | |
| 11745 chr1 manual_curation CDS 27879703 27880187 . - 0 Parent=GSCOCT00023977001 | |
| 11746 chr1 manual_curation CDS 27880269 27880425 . - 2 Parent=GSCOCT00023977001 | |
| 11747 chr1 manual_curation CDS 27881769 27881900 . - 2 Parent=GSCOCT00023977001 | |
| 11748 chr1 manual_curation CDS 27882044 27882632 . - 1 Parent=GSCOCT00023977001 | |
| 11749 chr1 manual_curation CDS 27882780 27882820 . - 2 Parent=GSCOCT00023977001 | |
| 11750 chr1 manual_curation CDS 27884314 27884456 . - 0 Parent=GSCOCT00023977001 | |
| 11751 chr1 manual_curation gene 27894573 27901285 . + . ID=GSCOCG00023979001;Name=Cc01_g09290 | |
| 11752 chr1 manual_curation mRNA 27894573 27901285 . + . ID=GSCOCT00023979001;Parent=GSCOCG00023979001;Name=Cc01_g09290 | |
| 11753 chr1 manual_curation polypeptide 27894573 27901068 . + . ID=GSCOCP00023979001;Dbxref=InterPro:IPR004827,InterPro:IPR011616,PFAM:PF00170,PROFILE:PS50217,PROSITE:PS00036,SMART:SM00338,SwissProt:O24160,SwissProt:P43273,SwissProt:Q41558,TAIR:AT1G08320.1,TAIR:AT5G06839.3,TAIR:AT5G06950.1,TrEMBL:B9HQ02,TrEMBL:B9MYX6,TrEMBL:D7TCV4;Derives_from=GSCOCT00023979001;Name=Cc01_g09290;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0043565,GO:0046983,CC_EC_number:missing_EC_number,PRODUCT:Transcription factor TGA2,CC_functional_completeness:modules,CC_gene:TGA21,CC_gene:TGA2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023979001~ Transcription factor TGA2~ TGA21~ modules;original_location=join(863458..863579%2C863713..863804%2C864188..864270%2C864407..864658%2C865508..865552%2C865794..865853%2C865968..866045%2C866166..866214%2C866915..867186%2C867278..867499%2C869085..869227%2C869866..869953);owner=coffea | |
| 11754 chr1 manual_curation exon 27894573 27894694 . + . Parent=GSCOCT00023979001 | |
| 11755 chr1 manual_curation exon 27894828 27894919 . + . Parent=GSCOCT00023979001 | |
| 11756 chr1 manual_curation exon 27895303 27895385 . + . Parent=GSCOCT00023979001 | |
| 11757 chr1 manual_curation exon 27895522 27895773 . + . Parent=GSCOCT00023979001 | |
| 11758 chr1 manual_curation exon 27896623 27896667 . + . Parent=GSCOCT00023979001 | |
| 11759 chr1 manual_curation exon 27896909 27896968 . + . Parent=GSCOCT00023979001 | |
| 11760 chr1 manual_curation exon 27897083 27897160 . + . Parent=GSCOCT00023979001 | |
| 11761 chr1 manual_curation exon 27897281 27897329 . + . Parent=GSCOCT00023979001 | |
| 11762 chr1 manual_curation exon 27898030 27898301 . + . Parent=GSCOCT00023979001 | |
| 11763 chr1 manual_curation exon 27898393 27898614 . + . Parent=GSCOCT00023979001 | |
| 11764 chr1 manual_curation exon 27900200 27900342 . + . Parent=GSCOCT00023979001 | |
| 11765 chr1 manual_curation exon 27900981 27901285 . + . Parent=GSCOCT00023979001 | |
| 11766 chr1 manual_curation CDS 27894573 27894694 . + 0 Parent=GSCOCT00023979001 | |
| 11767 chr1 manual_curation CDS 27894828 27894919 . + 2 Parent=GSCOCT00023979001 | |
| 11768 chr1 manual_curation CDS 27895303 27895385 . + 1 Parent=GSCOCT00023979001 | |
| 11769 chr1 manual_curation CDS 27895522 27895773 . + 0 Parent=GSCOCT00023979001 | |
| 11770 chr1 manual_curation CDS 27896623 27896667 . + 0 Parent=GSCOCT00023979001 | |
| 11771 chr1 manual_curation CDS 27896909 27896968 . + 0 Parent=GSCOCT00023979001 | |
| 11772 chr1 manual_curation CDS 27897083 27897160 . + 0 Parent=GSCOCT00023979001 | |
| 11773 chr1 manual_curation CDS 27897281 27897329 . + 0 Parent=GSCOCT00023979001 | |
| 11774 chr1 manual_curation CDS 27898030 27898301 . + 1 Parent=GSCOCT00023979001 | |
| 11775 chr1 manual_curation CDS 27898393 27898614 . + 0 Parent=GSCOCT00023979001 | |
| 11776 chr1 manual_curation CDS 27900200 27900342 . + 0 Parent=GSCOCT00023979001 | |
| 11777 chr1 manual_curation CDS 27900981 27901068 . + 2 Parent=GSCOCT00023979001 | |
| 11778 chr1 manual_curation gene 27909254 27923310 . - . ID=GSCOCG00023981001;Name=Cc01_g09300 | |
| 11779 chr1 manual_curation mRNA 27909254 27923310 . - . ID=GSCOCT00023981001;Parent=GSCOCG00023981001;Name=Cc01_g09300 | |
| 11780 chr1 manual_curation polypeptide 27909254 27922436 . - . ID=GSCOCP00023981001;Dbxref=TAIR:AT2G19390.1,TAIR:AT4G29790.1,TAIR:AT5G22450.1,TrEMBL:B9HQ01,TrEMBL:B9MYX7,TrEMBL:F6HHG4;Derives_from=GSCOCT00023981001;Name=Cc01_g09300;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B LOCATED IN,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023981001~ Putative unknown protein%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G19390.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ unknown_gene~ fragment;original_location=complement(join(891284..891321%2C884793..884981%2C883985..884608%2C883783..883877%2C881576..881638%2C881391..881479%2C881226..881285%2C880919..881069%2C880473..880828%2C880329..880400%2C879983..880053%2C879845..879899%2C878373..878637%2C878139..878293));owner=coffea | |
| 11781 chr1 manual_curation exon 27922721 27922825 . - . Parent=GSCOCT00023981001 | |
| 11782 chr1 manual_curation exon 27923034 27923310 . - . Parent=GSCOCT00023981001 | |
| 11783 chr1 manual_curation exon 27909254 27909408 . - . Parent=GSCOCT00023981001 | |
| 11784 chr1 manual_curation exon 27909488 27909752 . - . Parent=GSCOCT00023981001 | |
| 11785 chr1 manual_curation exon 27910960 27911014 . - . Parent=GSCOCT00023981001 | |
| 11786 chr1 manual_curation exon 27911098 27911168 . - . Parent=GSCOCT00023981001 | |
| 11787 chr1 manual_curation exon 27911444 27911515 . - . Parent=GSCOCT00023981001 | |
| 11788 chr1 manual_curation exon 27911588 27911943 . - . Parent=GSCOCT00023981001 | |
| 11789 chr1 manual_curation exon 27912034 27912184 . - . Parent=GSCOCT00023981001 | |
| 11790 chr1 manual_curation exon 27912341 27912400 . - . Parent=GSCOCT00023981001 | |
| 11791 chr1 manual_curation exon 27912506 27912594 . - . Parent=GSCOCT00023981001 | |
| 11792 chr1 manual_curation exon 27912691 27912753 . - . Parent=GSCOCT00023981001 | |
| 11793 chr1 manual_curation exon 27914898 27914992 . - . Parent=GSCOCT00023981001 | |
| 11794 chr1 manual_curation exon 27915100 27915723 . - . Parent=GSCOCT00023981001 | |
| 11795 chr1 manual_curation exon 27915908 27916096 . - . Parent=GSCOCT00023981001 | |
| 11796 chr1 manual_curation exon 27922399 27922552 . - . Parent=GSCOCT00023981001 | |
| 11797 chr1 manual_curation CDS 27909254 27909408 . - 1 Parent=GSCOCT00023981001 | |
| 11798 chr1 manual_curation CDS 27909488 27909752 . - 0 Parent=GSCOCT00023981001 | |
| 11799 chr1 manual_curation CDS 27910960 27911014 . - 2 Parent=GSCOCT00023981001 | |
| 11800 chr1 manual_curation CDS 27911098 27911168 . - 0 Parent=GSCOCT00023981001 | |
| 11801 chr1 manual_curation CDS 27911444 27911515 . - 0 Parent=GSCOCT00023981001 | |
| 11802 chr1 manual_curation CDS 27911588 27911943 . - 1 Parent=GSCOCT00023981001 | |
| 11803 chr1 manual_curation CDS 27912034 27912184 . - 0 Parent=GSCOCT00023981001 | |
| 11804 chr1 manual_curation CDS 27912341 27912400 . - 0 Parent=GSCOCT00023981001 | |
| 11805 chr1 manual_curation CDS 27912506 27912594 . - 1 Parent=GSCOCT00023981001 | |
| 11806 chr1 manual_curation CDS 27912691 27912753 . - 1 Parent=GSCOCT00023981001 | |
| 11807 chr1 manual_curation CDS 27914898 27914992 . - 2 Parent=GSCOCT00023981001 | |
| 11808 chr1 manual_curation CDS 27915100 27915723 . - 2 Parent=GSCOCT00023981001 | |
| 11809 chr1 manual_curation CDS 27915908 27916096 . - 2 Parent=GSCOCT00023981001 | |
| 11810 chr1 manual_curation CDS 27922399 27922436 . - 0 Parent=GSCOCT00023981001 | |
| 11811 chr1 manual_curation gene 27926914 27929558 . - . ID=GSCOCG00023982001;Name=Cc01_g09310 | |
| 11812 chr1 manual_curation mRNA 27926914 27929558 . - . ID=GSCOCT00023982001;Parent=GSCOCG00023982001;Name=Cc01_g09310 | |
| 11813 chr1 manual_curation polypeptide 27927043 27929230 . - . ID=GSCOCP00023982001;Dbxref=InterPro:IPR000073,PFAM:PF00561,TAIR:AT1G08310.2,TAIR:AT3G44510.2,TAIR:AT5G22460.1,TrEMBL:B9SCS4,TrEMBL:F6HHG5,TrEMBL:G7ITR5;Derives_from=GSCOCT00023982001;Name=Cc01_g09310;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:alpha/beta-Hydrolases superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023982001~ alpha/beta-Hydrolases superfamily protein~ unknown_gene~ complete;original_location=complement(join(897855..898115%2C896740..896951%2C896386..896647%2C895928..896245));owner=coffea | |
| 11814 chr1 manual_curation exon 27929349 27929558 . - . Parent=GSCOCT00023982001 | |
| 11815 chr1 manual_curation exon 27926914 27927360 . - . Parent=GSCOCT00023982001 | |
| 11816 chr1 manual_curation exon 27927501 27927762 . - . Parent=GSCOCT00023982001 | |
| 11817 chr1 manual_curation exon 27927855 27928066 . - . Parent=GSCOCT00023982001 | |
| 11818 chr1 manual_curation exon 27928970 27929232 . - . Parent=GSCOCT00023982001 | |
| 11819 chr1 manual_curation CDS 27927043 27927360 . - 0 Parent=GSCOCT00023982001 | |
| 11820 chr1 manual_curation CDS 27927501 27927762 . - 2 Parent=GSCOCT00023982001 | |
| 11821 chr1 manual_curation CDS 27927855 27928066 . - 0 Parent=GSCOCT00023982001 | |
| 11822 chr1 manual_curation CDS 27928970 27929230 . - 0 Parent=GSCOCT00023982001 | |
| 11823 chr1 manual_curation gene 27936706 27941694 . - . ID=GSCOCG00023984001;Name=Cc01_g09320 | |
| 11824 chr1 manual_curation mRNA 27936706 27941694 . - . ID=GSCOCT00023984001;Parent=GSCOCG00023984001;Name=Cc01_g09320 | |
| 11825 chr1 manual_curation polypeptide 27936866 27940166 . - . ID=GSCOCP00023984001;Dbxref=InterPro:IPR000073,PFAM:PF00561,TAIR:AT2G36290.1,TAIR:AT3G48410.1,TAIR:AT5G22460.1,TrEMBL:B9MYX8,TrEMBL:B9SCS2,TrEMBL:F6HHG6;Derives_from=GSCOCT00023984001;Name=Cc01_g09320;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:alpha/beta-Hydrolases superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023984001~ alpha/beta-Hydrolases superfamily protein~ unknown_gene~ complete;original_location=complement(join(908800..909051%2C907966..908177%2C906568..906835%2C905751..906041));owner=coffea | |
| 11826 chr1 manual_curation exon 27941512 27941694 . - . Parent=GSCOCT00023984001 | |
| 11827 chr1 manual_curation exon 27936706 27937156 . - . Parent=GSCOCT00023984001 | |
| 11828 chr1 manual_curation exon 27937683 27937950 . - . Parent=GSCOCT00023984001 | |
| 11829 chr1 manual_curation exon 27939081 27939292 . - . Parent=GSCOCT00023984001 | |
| 11830 chr1 manual_curation exon 27939915 27940168 . - . Parent=GSCOCT00023984001 | |
| 11831 chr1 manual_curation CDS 27936866 27937156 . - 0 Parent=GSCOCT00023984001 | |
| 11832 chr1 manual_curation CDS 27937683 27937950 . - 2 Parent=GSCOCT00023984001 | |
| 11833 chr1 manual_curation CDS 27939081 27939292 . - 0 Parent=GSCOCT00023984001 | |
| 11834 chr1 manual_curation CDS 27939915 27940166 . - 0 Parent=GSCOCT00023984001 | |
| 11835 chr1 manual_curation gene 27956080 27957735 . + . ID=GSCOCG00023985001;Name=Cc01_g09330 | |
| 11836 chr1 manual_curation mRNA 27956080 27957735 . + . ID=GSCOCT00023985001;Parent=GSCOCG00023985001;Name=Cc01_g09330 | |
| 11837 chr1 manual_curation polypeptide 27956080 27957735 . + . ID=GSCOCP00023985001;Dbxref=GENE3D:G3DSA:3.90.280.10,InterPro:IPR001858,InterPro:IPR008914,PFAM:PF01161,PROSITE:PS01220,SUPERFAMILY:SSF49777,SwissProt:Q41261,SwissProt:Q9XH42,SwissProt:Q9XH43,TAIR:AT2G27550.1,TAIR:AT5G03840.1,TAIR:AT5G62040.1,TrEMBL:B3FK63,TrEMBL:B4XEW2,TrEMBL:E3TQ07;Derives_from=GSCOCT00023985001;Name=Cc01_g09330;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:CEN-like protein 2,CC_functional_completeness:complete,CC_gene:CET2,CC_gene:CET4,CC_gene:CEN;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023985001~ CEN-like protein 2~ CET2~ complete;original_location=join(924965..925165%2C925285..925346%2C926254..926298%2C926407..926620);owner=coffea | |
| 11838 chr1 manual_curation exon 27956080 27956280 . + . Parent=GSCOCT00023985001 | |
| 11839 chr1 manual_curation exon 27956400 27956461 . + . Parent=GSCOCT00023985001 | |
| 11840 chr1 manual_curation exon 27957369 27957413 . + . Parent=GSCOCT00023985001 | |
| 11841 chr1 manual_curation exon 27957522 27957735 . + . Parent=GSCOCT00023985001 | |
| 11842 chr1 manual_curation CDS 27956080 27956280 . + 0 Parent=GSCOCT00023985001 | |
| 11843 chr1 manual_curation CDS 27956400 27956461 . + 0 Parent=GSCOCT00023985001 | |
| 11844 chr1 manual_curation CDS 27957369 27957413 . + 2 Parent=GSCOCT00023985001 | |
| 11845 chr1 manual_curation CDS 27957522 27957735 . + 2 Parent=GSCOCT00023985001 | |
| 11846 chr1 manual_curation gene 27966547 27967534 . + . ID=GSCOCG00023986001;Name=Cc01_g09340 | |
| 11847 chr1 manual_curation mRNA 27966547 27967534 . + . ID=GSCOCT00023986001;Parent=GSCOCG00023986001;Name=Cc01_g09340 | |
| 11848 chr1 manual_curation polypeptide 27966547 27967534 . + . ID=GSCOCP00023986001;Dbxref=GENE3D:G3DSA:3.90.280.10,InterPro:IPR001858,InterPro:IPR008914,PFAM:PF01161,PROSITE:PS01220,SUPERFAMILY:SSF49777,SwissProt:O82088,SwissProt:Q9XH42,SwissProt:Q9XH43,TAIR:AT2G27550.1,TAIR:AT5G03840.1,TAIR:AT5G62040.1,TrEMBL:B9HPZ6,TrEMBL:G1EAG6,TrEMBL:Q6L5U5;Derives_from=GSCOCT00023986001;Name=Cc01_g09340;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:CEN-like protein 2,CC_functional_completeness:complete,CC_gene:CET2,CC_gene:SP,CC_gene:CET4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023986001~ CEN-like protein 2~ CET2~ complete;original_location=join(935432..935554%2C935667..935728%2C936032..936076%2C936206..936419);owner=coffea | |
| 11849 chr1 manual_curation exon 27966547 27966669 . + . Parent=GSCOCT00023986001 | |
| 11850 chr1 manual_curation exon 27966782 27966843 . + . Parent=GSCOCT00023986001 | |
| 11851 chr1 manual_curation exon 27967147 27967191 . + . Parent=GSCOCT00023986001 | |
| 11852 chr1 manual_curation exon 27967321 27967534 . + . Parent=GSCOCT00023986001 | |
| 11853 chr1 manual_curation CDS 27966547 27966669 . + 0 Parent=GSCOCT00023986001 | |
| 11854 chr1 manual_curation CDS 27966782 27966843 . + 0 Parent=GSCOCT00023986001 | |
| 11855 chr1 manual_curation CDS 27967147 27967191 . + 2 Parent=GSCOCT00023986001 | |
| 11856 chr1 manual_curation CDS 27967321 27967534 . + 2 Parent=GSCOCT00023986001 | |
| 11857 chr1 manual_curation gene 27991676 27992993 . + . ID=GSCOCG00023987001;Name=Cc01_g09350 | |
| 11858 chr1 manual_curation mRNA 27991676 27992993 . + . ID=GSCOCT00023987001;Parent=GSCOCG00023987001;Name=Cc01_g09350 | |
| 11859 chr1 manual_curation polypeptide 27991676 27992993 . + . ID=GSCOCP00023987001;Dbxref=GENE3D:G3DSA:1.20.142.10,InterPro:IPR004102,InterPro:IPR008893,PFAM:PF05406,PROFILE:PS51060,SMART:SM00773,SUPERFAMILY:SSF47587,SwissProt:Q1SGF1,SwissProt:Q9FK91,SwissProt:Q9SWB4,TAIR:AT2G31320.1,TAIR:AT5G22470.1,TrEMBL:B9SCR8,TrEMBL:G7JIG7,TrEMBL:I1LKS7;Derives_from=GSCOCT00023987001;Name=Cc01_g09350;Ontology_term=CC_evidence_code:ISS,GO:0003950,GO:0006471,CC_EC_number:2.4.2.30,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:PARP3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023987001~ Hypothetical protein~ PARP3~ missing_functional_completeness;original_location=join(960561..960682%2C960763..961000%2C961107..961234%2C961313..961423%2C961791..961878);owner=coffea | |
| 11860 chr1 manual_curation exon 27991676 27991797 . + . Parent=GSCOCT00023987001 | |
| 11861 chr1 manual_curation exon 27991878 27992115 . + . Parent=GSCOCT00023987001 | |
| 11862 chr1 manual_curation exon 27992222 27992349 . + . Parent=GSCOCT00023987001 | |
| 11863 chr1 manual_curation exon 27992428 27992538 . + . Parent=GSCOCT00023987001 | |
| 11864 chr1 manual_curation exon 27992906 27992993 . + . Parent=GSCOCT00023987001 | |
| 11865 chr1 manual_curation CDS 27991676 27991797 . + 0 Parent=GSCOCT00023987001 | |
| 11866 chr1 manual_curation CDS 27991878 27992115 . + 2 Parent=GSCOCT00023987001 | |
| 11867 chr1 manual_curation CDS 27992222 27992349 . + 0 Parent=GSCOCT00023987001 | |
| 11868 chr1 manual_curation CDS 27992428 27992538 . + 2 Parent=GSCOCT00023987001 | |
| 11869 chr1 manual_curation CDS 27992906 27992993 . + 2 Parent=GSCOCT00023987001 | |
| 11870 chr1 manual_curation gene 27993079 27995179 . + . ID=GSCOCG00023988001;Name=Cc01_g09360 | |
| 11871 chr1 manual_curation mRNA 27993079 27995179 . + . ID=GSCOCT00023988001;Parent=GSCOCG00023988001;Name=Cc01_g09360 | |
| 11872 chr1 manual_curation polypeptide 27993079 27994523 . + . ID=GSCOCP00023988001;Dbxref=InterPro:IPR012317,PFAM:PF00644,PROFILE:PS51059,SwissProt:Q1SGF1,SwissProt:Q9FK91,SwissProt:Q9SWB4,TAIR:AT2G31320.1,TAIR:AT4G02390.1,TAIR:AT5G22470.1,TrEMBL:B9HQX1,TrEMBL:B9SCR8,TrEMBL:G7JIG7;Derives_from=GSCOCT00023988001;Name=Cc01_g09360;Ontology_term=CC_evidence_code:ISS,GO:0003950,CC_EC_number:2.4.2.30,PRODUCT:Putative poly [ADP-ribose] polymerase 3,CC_functional_completeness:fragment,CC_gene:PARP3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023988001~ Putative poly [ADP-ribose] polymerase 3~ PARP3~ fragment;original_location=join(961964..962029%2C962121..962330%2C962445..962547%2C962660..962742%2C962818..962961%2C963051..963233%2C963343..963408);owner=coffea | |
| 11873 chr1 manual_curation exon 27994920 27995179 . + . Parent=GSCOCT00023988001 | |
| 11874 chr1 manual_curation exon 27993079 27993144 . + . Parent=GSCOCT00023988001 | |
| 11875 chr1 manual_curation exon 27993236 27993445 . + . Parent=GSCOCT00023988001 | |
| 11876 chr1 manual_curation exon 27993560 27993662 . + . Parent=GSCOCT00023988001 | |
| 11877 chr1 manual_curation exon 27993775 27993857 . + . Parent=GSCOCT00023988001 | |
| 11878 chr1 manual_curation exon 27993933 27994076 . + . Parent=GSCOCT00023988001 | |
| 11879 chr1 manual_curation exon 27994166 27994348 . + . Parent=GSCOCT00023988001 | |
| 11880 chr1 manual_curation exon 27994458 27994610 . + . Parent=GSCOCT00023988001 | |
| 11881 chr1 manual_curation CDS 27993079 27993144 . + 0 Parent=GSCOCT00023988001 | |
| 11882 chr1 manual_curation CDS 27993236 27993445 . + 0 Parent=GSCOCT00023988001 | |
| 11883 chr1 manual_curation CDS 27993560 27993662 . + 0 Parent=GSCOCT00023988001 | |
| 11884 chr1 manual_curation CDS 27993775 27993857 . + 1 Parent=GSCOCT00023988001 | |
| 11885 chr1 manual_curation CDS 27993933 27994076 . + 0 Parent=GSCOCT00023988001 | |
| 11886 chr1 manual_curation CDS 27994166 27994348 . + 0 Parent=GSCOCT00023988001 | |
| 11887 chr1 manual_curation CDS 27994458 27994523 . + 0 Parent=GSCOCT00023988001 | |
| 11888 chr1 manual_curation gene 27996772 27997935 . - . ID=GSCOCG00023989001;Name=Cc01_g09370 | |
| 11889 chr1 manual_curation mRNA 27996772 27997935 . - . ID=GSCOCT00023989001;Parent=GSCOCG00023989001;Name=Cc01_g09370 | |
| 11890 chr1 manual_curation polypeptide 27996772 27997935 . - . ID=GSCOCP00023989001;Dbxref=InterPro:IPR001675,InterPro:IPR012163,PFAM:PF00777,PIR:PIRSF005557,SwissProt:Q16842,SwissProt:Q6KB58,TAIR:AT1G08280.1,TrEMBL:A5AUF9,TrEMBL:B9SCR7,TrEMBL:F6HHG9;Derives_from=GSCOCT00023989001;Name=Cc01_g09370;Ontology_term=CC_evidence_code:ISS,GO:0006486,GO:0008373,GO:0030173,CC_EC_number:2.4.99.4,PRODUCT:Glycosyltransferase family 29 (sialyltransferase) family protein,CC_functional_completeness:complete,CC_gene:ST3GAL2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023989001~ Glycosyltransferase family 29 (sialyltransferase) family protein~ ST3GAL2~ complete;original_location=complement(965657..966820);owner=coffea | |
| 11891 chr1 manual_curation exon 27996772 27997935 . - . Parent=GSCOCT00023989001 | |
| 11892 chr1 manual_curation CDS 27996772 27997935 . - 0 Parent=GSCOCT00023989001 | |
| 11893 chr1 manual_curation gene 28001008 28005585 . - . ID=GSCOCG00023990001;Name=Cc01_g09380 | |
| 11894 chr1 manual_curation mRNA 28001008 28005585 . - . ID=GSCOCT00023990001;Parent=GSCOCG00023990001;Name=Cc01_g09380 | |
| 11895 chr1 manual_curation polypeptide 28001368 28005454 . - . ID=GSCOCP00023990001;Dbxref=TAIR:AT2G27590.1,TrEMBL:B9H1R7,TrEMBL:B9SCR5,TrEMBL:F6HHH0;Derives_from=GSCOCT00023990001;Name=Cc01_g09380;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023990001~ S-adenosyl-L-methionine-dependent methyltransferases superfamily protein~ unknown_gene~ complete;original_location=complement(join(974282..974339%2C974079..974227%2C973808..973914%2C972268..972769%2C971174..971292%2C970253..970451));owner=coffea | |
| 11896 chr1 manual_curation exon 28001008 28001566 . - . Parent=GSCOCT00023990001 | |
| 11897 chr1 manual_curation exon 28002289 28002407 . - . Parent=GSCOCT00023990001 | |
| 11898 chr1 manual_curation exon 28003383 28003884 . - . Parent=GSCOCT00023990001 | |
| 11899 chr1 manual_curation exon 28004923 28005029 . - . Parent=GSCOCT00023990001 | |
| 11900 chr1 manual_curation exon 28005194 28005342 . - . Parent=GSCOCT00023990001 | |
| 11901 chr1 manual_curation exon 28005397 28005585 . - . Parent=GSCOCT00023990001 | |
| 11902 chr1 manual_curation CDS 28001368 28001566 . - 2 Parent=GSCOCT00023990001 | |
| 11903 chr1 manual_curation CDS 28002289 28002407 . - 0 Parent=GSCOCT00023990001 | |
| 11904 chr1 manual_curation CDS 28003383 28003884 . - 2 Parent=GSCOCT00023990001 | |
| 11905 chr1 manual_curation CDS 28004923 28005029 . - 0 Parent=GSCOCT00023990001 | |
| 11906 chr1 manual_curation CDS 28005194 28005342 . - 1 Parent=GSCOCT00023990001 | |
| 11907 chr1 manual_curation CDS 28005397 28005454 . - 0 Parent=GSCOCT00023990001 | |
| 11908 chr1 manual_curation gene 28007212 28013140 . + . ID=GSCOCG00023991001;Name=Cc01_g09390 | |
| 11909 chr1 manual_curation mRNA 28007212 28013140 . + . ID=GSCOCT00023991001;Parent=GSCOCG00023991001;Name=Cc01_g09390 | |
| 11910 chr1 manual_curation polypeptide 28007575 28012867 . + . ID=GSCOCP00023991001;Dbxref=InterPro:IPR003593,InterPro:IPR003959,InterPro:IPR003960,InterPro:IPR007330,InterPro:IPR015415,PFAM:PF00004,PFAM:PF04212,PFAM:PF09336,PROSITE:PS00674,SMART:SM00382,SMART:SM00745,SwissProt:O75351,SwissProt:Q0VD48,SwissProt:Q5R658,TAIR:AT1G80350.1,TAIR:AT2G27600.1,TAIR:AT2G45500.1,TrEMBL:B9HQW8,TrEMBL:B9SCR4,TrEMBL:F6HHH1;Derives_from=GSCOCT00023991001;Name=Cc01_g09390;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0017111,CC_EC_number:3.6.4.3,PRODUCT:Vacuolar protein sorting-associated protein 4B,CC_functional_completeness:complete,CC_gene:VPS4B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023991001~ Vacuolar protein sorting-associated protein 4B~ VPS4B~ complete;original_location=join(976460..976940%2C978312..978417%2C979363..979561%2C980440..980508%2C980717..980791%2C980899..980997%2C981149..981304%2C981627..981752);owner=coffea | |
| 11911 chr1 manual_curation exon 28007212 28008055 . + . Parent=GSCOCT00023991001 | |
| 11912 chr1 manual_curation exon 28009427 28009532 . + . Parent=GSCOCT00023991001 | |
| 11913 chr1 manual_curation exon 28010478 28010676 . + . Parent=GSCOCT00023991001 | |
| 11914 chr1 manual_curation exon 28011555 28011623 . + . Parent=GSCOCT00023991001 | |
| 11915 chr1 manual_curation exon 28011832 28011906 . + . Parent=GSCOCT00023991001 | |
| 11916 chr1 manual_curation exon 28012014 28012112 . + . Parent=GSCOCT00023991001 | |
| 11917 chr1 manual_curation exon 28012264 28012419 . + . Parent=GSCOCT00023991001 | |
| 11918 chr1 manual_curation exon 28012742 28013140 . + . Parent=GSCOCT00023991001 | |
| 11919 chr1 manual_curation CDS 28007575 28008055 . + 0 Parent=GSCOCT00023991001 | |
| 11920 chr1 manual_curation CDS 28009427 28009532 . + 1 Parent=GSCOCT00023991001 | |
| 11921 chr1 manual_curation CDS 28010478 28010676 . + 2 Parent=GSCOCT00023991001 | |
| 11922 chr1 manual_curation CDS 28011555 28011623 . + 0 Parent=GSCOCT00023991001 | |
| 11923 chr1 manual_curation CDS 28011832 28011906 . + 0 Parent=GSCOCT00023991001 | |
| 11924 chr1 manual_curation CDS 28012014 28012112 . + 0 Parent=GSCOCT00023991001 | |
| 11925 chr1 manual_curation CDS 28012264 28012419 . + 0 Parent=GSCOCT00023991001 | |
| 11926 chr1 manual_curation CDS 28012742 28012867 . + 0 Parent=GSCOCT00023991001 | |
| 11927 chr1 manual_curation gene 28018716 28024255 . + . ID=GSCOCG00023992001;Name=Cc01_g09400 | |
| 11928 chr1 manual_curation mRNA 28018716 28024255 . + . ID=GSCOCT00023992001;Parent=GSCOCG00023992001;Name=Cc01_g09400 | |
| 11929 chr1 manual_curation polypeptide 28018716 28024255 . + . ID=GSCOCP00023992001;Dbxref=GENE3D:G3DSA:3.40.50.200,InterPro:IPR000209,InterPro:IPR003137,InterPro:IPR010259,InterPro:IPR015500,InterPro:IPR022398,PANTHER:PTHR10795,PFAM:PF00082,PFAM:PF02225,PFAM:PF05922,PRINTS:PR00723,PROSITE:PS00138,SUPERFAMILY:SSF52743,SwissProt:O64495,SwissProt:O65351,SwissProt:Q39547,TAIR:AT1G20160.1,TAIR:AT2G04160.1,TAIR:AT5G67360.1,TrEMBL:A9JQS7,TrEMBL:B9HQW7,TrEMBL:D7TCX7;Derives_from=GSCOCT00023992001;Name=Cc01_g09400;Ontology_term=CC_evidence_code:ISS,GO:0004252,GO:0006508,GO:0042802,GO:0043086,CC_EC_number:3.4.21.25,PRODUCT:Putative Subtilisin-like protease,CC_functional_completeness:complete,CC_gene:ARA12,CC_gene:SDD1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023992001~ Putative Subtilisin-like protease~ ARA12~ complete;original_location=join(987601..987681%2C987864..987945%2C988865..989017%2C989352..989998%2C990108..990202%2C990453..990692%2C990927..991041%2C992302..992506%2C992593..993140);owner=coffea | |
| 11930 chr1 manual_curation exon 28018716 28018796 . + . Parent=GSCOCT00023992001 | |
| 11931 chr1 manual_curation exon 28018979 28019060 . + . Parent=GSCOCT00023992001 | |
| 11932 chr1 manual_curation exon 28019980 28020132 . + . Parent=GSCOCT00023992001 | |
| 11933 chr1 manual_curation exon 28020467 28021113 . + . Parent=GSCOCT00023992001 | |
| 11934 chr1 manual_curation exon 28021223 28021317 . + . Parent=GSCOCT00023992001 | |
| 11935 chr1 manual_curation exon 28021568 28021807 . + . Parent=GSCOCT00023992001 | |
| 11936 chr1 manual_curation exon 28022042 28022156 . + . Parent=GSCOCT00023992001 | |
| 11937 chr1 manual_curation exon 28023417 28023621 . + . Parent=GSCOCT00023992001 | |
| 11938 chr1 manual_curation exon 28023708 28024255 . + . Parent=GSCOCT00023992001 | |
| 11939 chr1 manual_curation CDS 28018716 28018796 . + 0 Parent=GSCOCT00023992001 | |
| 11940 chr1 manual_curation CDS 28018979 28019060 . + 0 Parent=GSCOCT00023992001 | |
| 11941 chr1 manual_curation CDS 28019980 28020132 . + 1 Parent=GSCOCT00023992001 | |
| 11942 chr1 manual_curation CDS 28020467 28021113 . + 1 Parent=GSCOCT00023992001 | |
| 11943 chr1 manual_curation CDS 28021223 28021317 . + 0 Parent=GSCOCT00023992001 | |
| 11944 chr1 manual_curation CDS 28021568 28021807 . + 2 Parent=GSCOCT00023992001 | |
| 11945 chr1 manual_curation CDS 28022042 28022156 . + 2 Parent=GSCOCT00023992001 | |
| 11946 chr1 manual_curation CDS 28023417 28023621 . + 0 Parent=GSCOCT00023992001 | |
| 11947 chr1 manual_curation CDS 28023708 28024255 . + 1 Parent=GSCOCT00023992001 | |
| 11948 chr1 manual_curation gene 28028579 28031078 . + . ID=GSCOCG00023993001;Name=Cc01_g09410 | |
| 11949 chr1 manual_curation mRNA 28028579 28031078 . + . ID=GSCOCT00023993001;Parent=GSCOCG00023993001;Name=Cc01_g09410 | |
| 11950 chr1 manual_curation polypeptide 28028679 28031078 . + . ID=GSCOCP00023993001;Dbxref=InterPro:IPR006694,PFAM:PF04116,SwissProt:F4JLZ6,SwissProt:Q1EC69,SwissProt:Q8L7W5,TAIR:AT4G12110.1,TAIR:AT4G22753.1,TAIR:AT4G22756.1,TrEMBL:C6T842,TrEMBL:G7JK82,TrEMBL:I1L6V0;Derives_from=GSCOCT00023993001;Name=Cc01_g09410;Ontology_term=CC_evidence_code:ISS,GO:0005506,GO:0005783,GO:0006633,GO:0016491,GO:0055114,CC_EC_number:1.14.13.72,PRODUCT:Methylsterol monooxygenase 1-1,CC_functional_completeness:complete,CC_gene:SMO1-1,CC_gene:SMO1-2,CC_gene:SMO1-3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023993001~ Methylsterol monooxygenase 1-1~ SMO1-1~ complete;original_location=join(997564..997893%2C998535..998857%2C998976..999123%2C999294..999326%2C999919..999963);owner=coffea | |
| 11951 chr1 manual_curation exon 28028579 28029008 . + . Parent=GSCOCT00023993001 | |
| 11952 chr1 manual_curation exon 28029650 28029972 . + . Parent=GSCOCT00023993001 | |
| 11953 chr1 manual_curation exon 28030091 28030238 . + . Parent=GSCOCT00023993001 | |
| 11954 chr1 manual_curation exon 28030409 28030441 . + . Parent=GSCOCT00023993001 | |
| 11955 chr1 manual_curation exon 28031034 28031078 . + . Parent=GSCOCT00023993001 | |
| 11956 chr1 manual_curation CDS 28028679 28029008 . + 0 Parent=GSCOCT00023993001 | |
| 11957 chr1 manual_curation CDS 28029650 28029972 . + 0 Parent=GSCOCT00023993001 | |
| 11958 chr1 manual_curation CDS 28030091 28030238 . + 2 Parent=GSCOCT00023993001 | |
| 11959 chr1 manual_curation CDS 28030409 28030441 . + 0 Parent=GSCOCT00023993001 | |
| 11960 chr1 manual_curation CDS 28031034 28031078 . + 0 Parent=GSCOCT00023993001 | |
| 11961 chr1 manual_curation gene 28035583 28038938 . + . ID=GSCOCG00023994001;Name=Cc01_g09420 | |
| 11962 chr1 manual_curation mRNA 28035583 28038938 . + . ID=GSCOCT00023994001;Parent=GSCOCG00023994001;Name=Cc01_g09420 | |
| 11963 chr1 manual_curation polypeptide 28035583 28038938 . + . ID=GSCOCP00023994001;Dbxref=GENE3D:G3DSA:3.40.50.200,InterPro:IPR000209,InterPro:IPR003137,InterPro:IPR010259,InterPro:IPR015500,InterPro:IPR022398,PANTHER:PTHR10795,PFAM:PF00082,PFAM:PF02225,PFAM:PF05922,PRINTS:PR00723,PROSITE:PS00137,SUPERFAMILY:SSF52743,SwissProt:O64495,SwissProt:O65351,SwissProt:Q39547,TAIR:AT2G04160.1,TAIR:AT4G10520.1,TAIR:AT5G67360.1,TrEMBL:A9JQS7,TrEMBL:D7TCX7,TrEMBL:I1LKT4;Derives_from=GSCOCT00023994001;Name=Cc01_g09420;Ontology_term=CC_evidence_code:ISS,GO:0004252,GO:0006508,GO:0042802,GO:0043086,CC_EC_number:3.4.21.25,PRODUCT:Putative Subtilisin-like protease,CC_functional_completeness:complete,CC_gene:ARA12,CC_gene:SDD1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023994001~ Putative Subtilisin-like protease~ ARA12~ complete;original_location=join(1004468..1004569%2C1004680..1004761%2C1004852..1005004%2C1005094..1005246%2C1005306..1005832%2C1005987..1006035%2C1006323..1006602%2C1006679..1006793%2C1006978..1007182%2C1007276..1007823);owner=coffea | |
| 11964 chr1 manual_curation exon 28035583 28035684 . + . Parent=GSCOCT00023994001 | |
| 11965 chr1 manual_curation exon 28035795 28035876 . + . Parent=GSCOCT00023994001 | |
| 11966 chr1 manual_curation exon 28035967 28036119 . + . Parent=GSCOCT00023994001 | |
| 11967 chr1 manual_curation exon 28036209 28036361 . + . Parent=GSCOCT00023994001 | |
| 11968 chr1 manual_curation exon 28036421 28036947 . + . Parent=GSCOCT00023994001 | |
| 11969 chr1 manual_curation exon 28037102 28037150 . + . Parent=GSCOCT00023994001 | |
| 11970 chr1 manual_curation exon 28037438 28037717 . + . Parent=GSCOCT00023994001 | |
| 11971 chr1 manual_curation exon 28037794 28037908 . + . Parent=GSCOCT00023994001 | |
| 11972 chr1 manual_curation exon 28038093 28038297 . + . Parent=GSCOCT00023994001 | |
| 11973 chr1 manual_curation exon 28038391 28038938 . + . Parent=GSCOCT00023994001 | |
| 11974 chr1 manual_curation CDS 28035583 28035684 . + 0 Parent=GSCOCT00023994001 | |
| 11975 chr1 manual_curation CDS 28035795 28035876 . + 0 Parent=GSCOCT00023994001 | |
| 11976 chr1 manual_curation CDS 28035967 28036119 . + 1 Parent=GSCOCT00023994001 | |
| 11977 chr1 manual_curation CDS 28036209 28036361 . + 1 Parent=GSCOCT00023994001 | |
| 11978 chr1 manual_curation CDS 28036421 28036947 . + 1 Parent=GSCOCT00023994001 | |
| 11979 chr1 manual_curation CDS 28037102 28037150 . + 0 Parent=GSCOCT00023994001 | |
| 11980 chr1 manual_curation CDS 28037438 28037717 . + 1 Parent=GSCOCT00023994001 | |
| 11981 chr1 manual_curation CDS 28037794 28037908 . + 2 Parent=GSCOCT00023994001 | |
| 11982 chr1 manual_curation CDS 28038093 28038297 . + 0 Parent=GSCOCT00023994001 | |
| 11983 chr1 manual_curation CDS 28038391 28038938 . + 1 Parent=GSCOCT00023994001 | |
| 11984 chr1 manual_curation gene 28040406 28043021 . - . ID=GSCOCG00023995001;Name=Cc01_g09430 | |
| 11985 chr1 manual_curation mRNA 28040406 28043021 . - . ID=GSCOCT00023995001;Parent=GSCOCG00023995001;Name=Cc01_g09430 | |
| 11986 chr1 manual_curation polypeptide 28040406 28043021 . - . ID=GSCOCP00023995001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q5G1T1,SwissProt:Q9SVP7,SwissProt:Q9ZUW3,TAIR:AT2G27610.1,TAIR:AT3G49170.1,TAIR:AT4G13650.1,TIGRFAMs:TIGR00756,TrEMBL:D7LJ24,TrEMBL:G7ITP9,TrEMBL:I1LTU4;Derives_from=GSCOCT00023995001;Name=Cc01_g09430;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At2g27610,CC_functional_completeness:complete,CC_gene:PCMP-H60,CC_gene:PCMP-H42,CC_gene:EMB2261;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023995001~ Pentatricopeptide repeat-containing protein At2g27610~ PCMP-H60~ complete;original_location=complement(1009291..1011906);owner=coffea | |
| 11987 chr1 manual_curation exon 28040406 28043021 . - . Parent=GSCOCT00023995001 | |
| 11988 chr1 manual_curation CDS 28040406 28043021 . - 0 Parent=GSCOCT00023995001 | |
| 11989 chr1 manual_curation gene 28053550 28062139 . + . ID=GSCOCG00023997001;Name=Cc01_g09440 | |
| 11990 chr1 manual_curation mRNA 28053550 28062139 . + . ID=GSCOCT00023997001;Parent=GSCOCG00023997001;Name=Cc01_g09440 | |
| 11991 chr1 manual_curation polypeptide 28053960 28061132 . + . ID=GSCOCP00023997001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR011046,InterPro:IPR011494,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019775,InterPro:IPR019781,InterPro:IPR019782,InterPro:IPR020472,PFAM:PF00400,PFAM:PF07569,PRINTS:PR00320,PROFILE:PS50082,PROFILE:PS50294,PROSITE:PS00678,SMART:SM00320,SUPERFAMILY:SSF50978,SwissProt:Q32SG6,SwissProt:Q652L2,SwissProt:Q9LXN4,TAIR:AT3G44530.1,TAIR:AT5G64630.2,TAIR:AT5G67320.1,TrEMBL:B9SCR1,TrEMBL:D7TCX9,TrEMBL:I1M4E1;Derives_from=GSCOCT00023997001;Name=Cc01_g09440;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0030528,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Protein HIRA,CC_functional_completeness:complete,CC_gene:HIRA,CC_gene:Os09g0567700;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023997001~ Protein HIRA~ HIRA~ complete;original_location=join(1022845..1022952%2C1024454..1024729%2C1024993..1025244%2C1025342..1025739%2C1025881..1026886%2C1027451..1027661%2C1027815..1028055%2C1028435..1028557%2C1029225..1029339%2C1029414..1029487%2C1030011..1030017);owner=coffea | |
| 11992 chr1 manual_curation exon 28053550 28053722 . + . Parent=GSCOCT00023997001 | |
| 11993 chr1 manual_curation exon 28053827 28054067 . + . Parent=GSCOCT00023997001 | |
| 11994 chr1 manual_curation exon 28055569 28055844 . + . Parent=GSCOCT00023997001 | |
| 11995 chr1 manual_curation exon 28056108 28056359 . + . Parent=GSCOCT00023997001 | |
| 11996 chr1 manual_curation exon 28056457 28056854 . + . Parent=GSCOCT00023997001 | |
| 11997 chr1 manual_curation exon 28056996 28058001 . + . Parent=GSCOCT00023997001 | |
| 11998 chr1 manual_curation exon 28058566 28058776 . + . Parent=GSCOCT00023997001 | |
| 11999 chr1 manual_curation exon 28058930 28059170 . + . Parent=GSCOCT00023997001 | |
| 12000 chr1 manual_curation exon 28059550 28059672 . + . Parent=GSCOCT00023997001 | |
| 12001 chr1 manual_curation exon 28060340 28060454 . + . Parent=GSCOCT00023997001 | |
| 12002 chr1 manual_curation exon 28060529 28060602 . + . Parent=GSCOCT00023997001 | |
| 12003 chr1 manual_curation exon 28061126 28062139 . + . Parent=GSCOCT00023997001 | |
| 12004 chr1 manual_curation CDS 28053960 28054067 . + 0 Parent=GSCOCT00023997001 | |
| 12005 chr1 manual_curation CDS 28055569 28055844 . + 0 Parent=GSCOCT00023997001 | |
| 12006 chr1 manual_curation CDS 28056108 28056359 . + 0 Parent=GSCOCT00023997001 | |
| 12007 chr1 manual_curation CDS 28056457 28056854 . + 0 Parent=GSCOCT00023997001 | |
| 12008 chr1 manual_curation CDS 28056996 28058001 . + 2 Parent=GSCOCT00023997001 | |
| 12009 chr1 manual_curation CDS 28058566 28058776 . + 0 Parent=GSCOCT00023997001 | |
| 12010 chr1 manual_curation CDS 28058930 28059170 . + 1 Parent=GSCOCT00023997001 | |
| 12011 chr1 manual_curation CDS 28059550 28059672 . + 2 Parent=GSCOCT00023997001 | |
| 12012 chr1 manual_curation CDS 28060340 28060454 . + 2 Parent=GSCOCT00023997001 | |
| 12013 chr1 manual_curation CDS 28060529 28060602 . + 0 Parent=GSCOCT00023997001 | |
| 12014 chr1 manual_curation CDS 28061126 28061132 . + 2 Parent=GSCOCT00023997001 | |
| 12015 chr1 manual_curation gene 28070254 28076876 . + . ID=GSCOCG00023999001;Name=Cc01_g09450 | |
| 12016 chr1 manual_curation mRNA 28070254 28076876 . + . ID=GSCOCT00023999001;Parent=GSCOCG00023999001;Name=Cc01_g09450 | |
| 12017 chr1 manual_curation polypeptide 28070254 28076814 . + . ID=GSCOCP00023999001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR004262,InterPro:IPR013120,InterPro:IPR016040,PFAM:PF03015,PFAM:PF07993,SwissProt:Q39152,SwissProt:Q93ZB9,SwissProt:Q9LXN3,TAIR:AT3G44540.1,TAIR:AT4G33790.1,TAIR:AT5G22500.1,TrEMBL:D7TCY0,TrEMBL:G7IRD9,TrEMBL:I1LRE5;Derives_from=GSCOCT00023999001;Name=Cc01_g09450;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,CC_EC_number:1.2.1.31,PRODUCT:Fatty acyl-CoA reductase 3,CC_functional_completeness:complete,CC_gene:FAR3,CC_gene:FAR4,CC_gene:FAR1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00023999001~ Fatty acyl-CoA reductase 3~ FAR3~ complete;original_location=join(1039139..1039217%2C1039343..1039446%2C1040285..1040487%2C1040556..1040656%2C1041996..1042188%2C1043410..1043571%2C1043719..1043800%2C1044940..1045209%2C1045319..1045446%2C1045549..1045699);owner=coffea | |
| 12018 chr1 manual_curation exon 28070254 28070332 . + . Parent=GSCOCT00023999001 | |
| 12019 chr1 manual_curation exon 28070458 28070561 . + . Parent=GSCOCT00023999001 | |
| 12020 chr1 manual_curation exon 28071400 28071602 . + . Parent=GSCOCT00023999001 | |
| 12021 chr1 manual_curation exon 28071671 28071771 . + . Parent=GSCOCT00023999001 | |
| 12022 chr1 manual_curation exon 28073111 28073303 . + . Parent=GSCOCT00023999001 | |
| 12023 chr1 manual_curation exon 28074525 28074686 . + . Parent=GSCOCT00023999001 | |
| 12024 chr1 manual_curation exon 28074834 28074915 . + . Parent=GSCOCT00023999001 | |
| 12025 chr1 manual_curation exon 28076055 28076324 . + . Parent=GSCOCT00023999001 | |
| 12026 chr1 manual_curation exon 28076434 28076561 . + . Parent=GSCOCT00023999001 | |
| 12027 chr1 manual_curation exon 28076664 28076876 . + . Parent=GSCOCT00023999001 | |
| 12028 chr1 manual_curation CDS 28070254 28070332 . + 0 Parent=GSCOCT00023999001 | |
| 12029 chr1 manual_curation CDS 28070458 28070561 . + 1 Parent=GSCOCT00023999001 | |
| 12030 chr1 manual_curation CDS 28071400 28071602 . + 0 Parent=GSCOCT00023999001 | |
| 12031 chr1 manual_curation CDS 28071671 28071771 . + 2 Parent=GSCOCT00023999001 | |
| 12032 chr1 manual_curation CDS 28073111 28073303 . + 1 Parent=GSCOCT00023999001 | |
| 12033 chr1 manual_curation CDS 28074525 28074686 . + 2 Parent=GSCOCT00023999001 | |
| 12034 chr1 manual_curation CDS 28074834 28074915 . + 2 Parent=GSCOCT00023999001 | |
| 12035 chr1 manual_curation CDS 28076055 28076324 . + 0 Parent=GSCOCT00023999001 | |
| 12036 chr1 manual_curation CDS 28076434 28076561 . + 0 Parent=GSCOCT00023999001 | |
| 12037 chr1 manual_curation CDS 28076664 28076814 . + 2 Parent=GSCOCT00023999001 | |
| 12038 chr1 manual_curation gene 28077109 28081770 . - . ID=GSCOCG00024000001;Name=Cc01_g09460 | |
| 12039 chr1 manual_curation mRNA 28077109 28081770 . - . ID=GSCOCT00024000001;Parent=GSCOCG00024000001;Name=Cc01_g09460 | |
| 12040 chr1 manual_curation polypeptide 28077615 28081770 . - . ID=GSCOCP00024000001;Dbxref=InterPro:IPR002528,InterPro:IPR021869,PANTHER:PTHR11206,PFAM:PF11977,SwissProt:Q66GI4,TAIR:AT2G16650.1,TAIR:AT2G32230.1,TAIR:AT4G21900.1,TrEMBL:B9H1Z3,TrEMBL:F6HJZ8,TrEMBL:I1LTU0;Derives_from=GSCOCT00024000001;Name=Cc01_g09460;Ontology_term=CC_evidence_code:ISS,GO:0006855,GO:0015238,GO:0015297,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Putative Pentatricopeptide repeat-containing protein At2g32230%2C mitochondrial,CC_functional_completeness:complete,CC_gene:At2g32230;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024000001~ Putative Pentatricopeptide repeat-containing protein At2g32230%2C mitochondrial~ At2g32230~ complete;original_location=complement(join(1050122..1050655%2C1048912..1049304%2C1048159..1048260%2C1047881..1048053%2C1047633..1047753%2C1046993..1047061%2C1046500..1046757));owner=coffea | |
| 12041 chr1 manual_curation exon 28077109 28077872 . - . Parent=GSCOCT00024000001 | |
| 12042 chr1 manual_curation exon 28078108 28078176 . - . Parent=GSCOCT00024000001 | |
| 12043 chr1 manual_curation exon 28078748 28078868 . - . Parent=GSCOCT00024000001 | |
| 12044 chr1 manual_curation exon 28078996 28079168 . - . Parent=GSCOCT00024000001 | |
| 12045 chr1 manual_curation exon 28079274 28079375 . - . Parent=GSCOCT00024000001 | |
| 12046 chr1 manual_curation exon 28080027 28080419 . - . Parent=GSCOCT00024000001 | |
| 12047 chr1 manual_curation exon 28081237 28081770 . - . Parent=GSCOCT00024000001 | |
| 12048 chr1 manual_curation CDS 28077615 28077872 . - 0 Parent=GSCOCT00024000001 | |
| 12049 chr1 manual_curation CDS 28078108 28078176 . - 0 Parent=GSCOCT00024000001 | |
| 12050 chr1 manual_curation CDS 28078748 28078868 . - 2 Parent=GSCOCT00024000001 | |
| 12051 chr1 manual_curation CDS 28078996 28079168 . - 0 Parent=GSCOCT00024000001 | |
| 12052 chr1 manual_curation CDS 28079274 28079375 . - 0 Parent=GSCOCT00024000001 | |
| 12053 chr1 manual_curation CDS 28080027 28080419 . - 0 Parent=GSCOCT00024000001 | |
| 12054 chr1 manual_curation CDS 28081237 28081770 . - 0 Parent=GSCOCT00024000001 | |
| 12055 chr1 manual_curation gene 28094884 28096101 . - . ID=GSCOCG00024001001;Name=Cc01_g09470 | |
| 12056 chr1 manual_curation mRNA 28094884 28096101 . - . ID=GSCOCT00024001001;Parent=GSCOCG00024001001;Name=Cc01_g09470 | |
| 12057 chr1 manual_curation polypeptide 28094884 28096101 . - . ID=GSCOCP00024001001;Dbxref=TAIR:AT1G16290.1,TrEMBL:B9HY34,TrEMBL:B9RHW0,TrEMBL:D7SWW1;Derives_from=GSCOCT00024001001;Name=Cc01_g09470;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:FUNCTIONS IN,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024001001~ FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%2C vacuole%3B EXPRESSED IN: 19 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: Lytic transglycosylase-like%2C catalytic (InterPro:IPR008258)%3B Has 171 Blast hits to 155 proteins in 40 species: Archae - 0%3B Bacteria - 54%3B Metazoa - 0%3B Fungi - 0%3B Plants - 55%3B Viruses - 0%3B Other Eukaryotes - 62 (source: NCBI BLink).~ unknown_gene~ fragment;original_location=complement(join(1064861..1064986%2C1064082..1064135%2C1063769..1063855));owner=coffea | |
| 12058 chr1 manual_curation exon 28094884 28094970 . - . Parent=GSCOCT00024001001 | |
| 12059 chr1 manual_curation exon 28095197 28095250 . - . Parent=GSCOCT00024001001 | |
| 12060 chr1 manual_curation exon 28095976 28096101 . - . Parent=GSCOCT00024001001 | |
| 12061 chr1 manual_curation CDS 28094884 28094970 . - 0 Parent=GSCOCT00024001001 | |
| 12062 chr1 manual_curation CDS 28095197 28095250 . - 0 Parent=GSCOCT00024001001 | |
| 12063 chr1 manual_curation CDS 28095976 28096101 . - 0 Parent=GSCOCT00024001001 | |
| 12064 chr1 manual_curation gene 28114624 28115266 . + . ID=GSCOCG00024002001;Name=Cc01_g09480 | |
| 12065 chr1 manual_curation mRNA 28114624 28115266 . + . ID=GSCOCT00024002001;Parent=GSCOCG00024002001;Name=Cc01_g09480 | |
| 12066 chr1 manual_curation polypeptide 28114624 28115266 . + . ID=GSCOCP00024002001;Dbxref=InterPro:IPR013120,PFAM:PF07993,SwissProt:Q0WRB0,SwissProt:Q93ZB9,SwissProt:Q9LXN3,TAIR:AT3G44540.1,TAIR:AT3G44550.1,TAIR:AT4G33790.1,TrEMBL:A5BM21,TrEMBL:B9H1Z2,TrEMBL:D7TCY1;Derives_from=GSCOCT00024002001;Name=Cc01_g09480;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Probable fatty acyl-CoA reductase 5,CC_functional_completeness:fragment,CC_gene:FAR5,CC_gene:FAR3,CC_gene:FAR4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024002001~ Probable fatty acyl-CoA reductase 5~ FAR5~ fragment;original_location=join(1083509..1083587%2C1083763..1083866%2C1084110..1084151);owner=coffea | |
| 12067 chr1 manual_curation exon 28114624 28114702 . + . Parent=GSCOCT00024002001 | |
| 12068 chr1 manual_curation exon 28114878 28114981 . + . Parent=GSCOCT00024002001 | |
| 12069 chr1 manual_curation exon 28115225 28115266 . + . Parent=GSCOCT00024002001 | |
| 12070 chr1 manual_curation CDS 28114624 28114702 . + 0 Parent=GSCOCT00024002001 | |
| 12071 chr1 manual_curation CDS 28114878 28114981 . + 1 Parent=GSCOCT00024002001 | |
| 12072 chr1 manual_curation CDS 28115225 28115266 . + 0 Parent=GSCOCT00024002001 | |
| 12073 chr1 manual_curation gene 28115369 28120094 . + . ID=GSCOCG00024003001;Name=Cc01_g09490 | |
| 12074 chr1 manual_curation mRNA 28115369 28120094 . + . ID=GSCOCT00024003001;Parent=GSCOCG00024003001;Name=Cc01_g09490 | |
| 12075 chr1 manual_curation polypeptide 28115369 28120094 . + . ID=GSCOCP00024003001;Dbxref=InterPro:IPR004262,InterPro:IPR013120,PFAM:PF03015,PFAM:PF07993,SwissProt:Q39152,SwissProt:Q93ZB9,SwissProt:Q9LXN3,TAIR:AT3G44540.1,TAIR:AT4G33790.1,TAIR:AT5G22500.1,TrEMBL:B9H1Z1,TrEMBL:D7TCY0,TrEMBL:I1LRE5;Derives_from=GSCOCT00024003001;Name=Cc01_g09490;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Probable fatty acyl-CoA reductase 4,CC_functional_completeness:fragment,CC_gene:FAR4,CC_gene:FAR3,CC_gene:FAR1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024003001~ Probable fatty acyl-CoA reductase 4~ FAR4~ fragment;original_location=join(1084254..1084312%2C1084390..1084490%2C1084966..1085161%2C1086187..1086348%2C1086902..1086983%2C1087450..1087719%2C1088616..1088743%2C1088835..1088979);owner=coffea | |
| 12076 chr1 manual_curation exon 28115369 28115427 . + . Parent=GSCOCT00024003001 | |
| 12077 chr1 manual_curation exon 28115505 28115605 . + . Parent=GSCOCT00024003001 | |
| 12078 chr1 manual_curation exon 28116081 28116276 . + . Parent=GSCOCT00024003001 | |
| 12079 chr1 manual_curation exon 28117302 28117463 . + . Parent=GSCOCT00024003001 | |
| 12080 chr1 manual_curation exon 28118017 28118098 . + . Parent=GSCOCT00024003001 | |
| 12081 chr1 manual_curation exon 28118565 28118834 . + . Parent=GSCOCT00024003001 | |
| 12082 chr1 manual_curation exon 28119731 28119858 . + . Parent=GSCOCT00024003001 | |
| 12083 chr1 manual_curation exon 28119950 28120094 . + . Parent=GSCOCT00024003001 | |
| 12084 chr1 manual_curation CDS 28115369 28115427 . + 0 Parent=GSCOCT00024003001 | |
| 12085 chr1 manual_curation CDS 28115505 28115605 . + 2 Parent=GSCOCT00024003001 | |
| 12086 chr1 manual_curation CDS 28116081 28116276 . + 1 Parent=GSCOCT00024003001 | |
| 12087 chr1 manual_curation CDS 28117302 28117463 . + 2 Parent=GSCOCT00024003001 | |
| 12088 chr1 manual_curation CDS 28118017 28118098 . + 2 Parent=GSCOCT00024003001 | |
| 12089 chr1 manual_curation CDS 28118565 28118834 . + 0 Parent=GSCOCT00024003001 | |
| 12090 chr1 manual_curation CDS 28119731 28119858 . + 0 Parent=GSCOCT00024003001 | |
| 12091 chr1 manual_curation CDS 28119950 28120094 . + 2 Parent=GSCOCT00024003001 | |
| 12092 chr1 manual_curation gene 28143980 28146311 . + . ID=GSCOCG00024004001;Name=Cc01_g09500 | |
| 12093 chr1 manual_curation mRNA 28143980 28146311 . + . ID=GSCOCT00024004001;Parent=GSCOCG00024004001;Name=Cc01_g09500 | |
| 12094 chr1 manual_curation polypeptide 28144247 28145773 . + . ID=GSCOCP00024004001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,SUPERFAMILY:SSF48264,SwissProt:O81117,SwissProt:P98188,SwissProt:Q9FMY1,TAIR:AT2G27690.1,TAIR:AT3G48520.1,TAIR:AT5G63450.1,TrEMBL:A5BDK3,TrEMBL:B9HQW0,TrEMBL:B9MYH2;Derives_from=GSCOCT00024004001;Name=Cc01_g09500;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.14.1,PRODUCT:Putative Cytochrome P450 94A1,CC_functional_completeness:complete,CC_gene:CYP94A1,CC_gene:CYP86B1,CC_gene:CYP94A2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024004001~ Putative Cytochrome P450 94A1~ CYP94A1~ complete;original_location=1113132..1114658;owner=coffea | |
| 12095 chr1 manual_curation exon 28143980 28146311 . + . Parent=GSCOCT00024004001 | |
| 12096 chr1 manual_curation CDS 28144247 28145773 . + 0 Parent=GSCOCT00024004001 | |
| 12097 chr1 manual_curation gene 28174330 28178956 . + . ID=GSCOCG00024005001;Name=Cc01_g09510 | |
| 12098 chr1 manual_curation mRNA 28174330 28178956 . + . ID=GSCOCT00024005001;Parent=GSCOCG00024005001;Name=Cc01_g09510 | |
| 12099 chr1 manual_curation polypeptide 28174755 28178709 . + . ID=GSCOCP00024005001;Dbxref=GENE3D:G3DSA:3.20.20.100,InterPro:IPR001395,PANTHER:PTHR11732,PFAM:PF00248,SUPERFAMILY:SSF51430,SwissProt:P46905,SwissProt:Q94A68,TAIR:AT1G06690.1,TAIR:AT2G27680.1,TAIR:AT5G53580.1,TrEMBL:B9SSU2,TrEMBL:I1M4E6;Derives_from=GSCOCT00024005001;Name=Cc01_g09510;Ontology_term=CC_evidence_code:ISS,GO:0016491,GO:0055114,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized oxidoreductase At1g06690%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:At1g06690,CC_gene:yccK;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024005001~ Putative Uncharacterized oxidoreductase At1g06690%2C chloroplastic~ At1g06690~ fragment;original_location=join(1143640..1143691%2C1144820..1144904%2C1145021..1145137%2C1145595..1145659%2C1145747..1145835%2C1146316..1146395%2C1146676..1146787%2C1147162..1147281%2C1147409..1147594);owner=coffea | |
| 12100 chr1 manual_curation exon 28174330 28174806 . + . Parent=GSCOCT00024005001 | |
| 12101 chr1 manual_curation exon 28175935 28176019 . + . Parent=GSCOCT00024005001 | |
| 12102 chr1 manual_curation exon 28176136 28176252 . + . Parent=GSCOCT00024005001 | |
| 12103 chr1 manual_curation exon 28176710 28176774 . + . Parent=GSCOCT00024005001 | |
| 12104 chr1 manual_curation exon 28176862 28176950 . + . Parent=GSCOCT00024005001 | |
| 12105 chr1 manual_curation exon 28177431 28177510 . + . Parent=GSCOCT00024005001 | |
| 12106 chr1 manual_curation exon 28177791 28177902 . + . Parent=GSCOCT00024005001 | |
| 12107 chr1 manual_curation exon 28178277 28178396 . + . Parent=GSCOCT00024005001 | |
| 12108 chr1 manual_curation exon 28178524 28178956 . + . Parent=GSCOCT00024005001 | |
| 12109 chr1 manual_curation CDS 28174755 28174806 . + 0 Parent=GSCOCT00024005001 | |
| 12110 chr1 manual_curation CDS 28175935 28176019 . + 1 Parent=GSCOCT00024005001 | |
| 12111 chr1 manual_curation CDS 28176136 28176252 . + 2 Parent=GSCOCT00024005001 | |
| 12112 chr1 manual_curation CDS 28176710 28176774 . + 2 Parent=GSCOCT00024005001 | |
| 12113 chr1 manual_curation CDS 28176862 28176950 . + 1 Parent=GSCOCT00024005001 | |
| 12114 chr1 manual_curation CDS 28177431 28177510 . + 0 Parent=GSCOCT00024005001 | |
| 12115 chr1 manual_curation CDS 28177791 28177902 . + 2 Parent=GSCOCT00024005001 | |
| 12116 chr1 manual_curation CDS 28178277 28178396 . + 0 Parent=GSCOCT00024005001 | |
| 12117 chr1 manual_curation CDS 28178524 28178709 . + 0 Parent=GSCOCT00024005001 | |
| 12118 chr1 manual_curation gene 28195386 28199551 . + . ID=GSCOCG00024011001;Name=Cc01_g09520 | |
| 12119 chr1 manual_curation mRNA 28195386 28199551 . + . ID=GSCOCT00024011001;Parent=GSCOCG00024011001;Name=Cc01_g09520 | |
| 12120 chr1 manual_curation polypeptide 28196568 28199133 . + . ID=GSCOCP00024011001;Dbxref=TAIR:AT4G04190.1,TrEMBL:D7M161,TrEMBL:D7TCZ1,TrEMBL:Q0IGH7;Derives_from=GSCOCT00024011001;Name=Cc01_g09520;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B Has 35 Blast hits to 35 proteins in 13 species,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024011001~ unknown protein%3B Has 35 Blast hits to 35 proteins in 13 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 33%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(1165453..1165585%2C1165670..1165743%2C1165879..1165997%2C1166750..1166833%2C1167922..1168018);owner=coffea | |
| 12121 chr1 manual_curation exon 28195386 28196700 . + . Parent=GSCOCT00024011001 | |
| 12122 chr1 manual_curation exon 28196785 28196858 . + . Parent=GSCOCT00024011001 | |
| 12123 chr1 manual_curation exon 28196994 28197112 . + . Parent=GSCOCT00024011001 | |
| 12124 chr1 manual_curation exon 28197865 28197948 . + . Parent=GSCOCT00024011001 | |
| 12125 chr1 manual_curation exon 28199037 28199551 . + . Parent=GSCOCT00024011001 | |
| 12126 chr1 manual_curation CDS 28196568 28196700 . + 0 Parent=GSCOCT00024011001 | |
| 12127 chr1 manual_curation CDS 28196785 28196858 . + 1 Parent=GSCOCT00024011001 | |
| 12128 chr1 manual_curation CDS 28196994 28197112 . + 0 Parent=GSCOCT00024011001 | |
| 12129 chr1 manual_curation CDS 28197865 28197948 . + 2 Parent=GSCOCT00024011001 | |
| 12130 chr1 manual_curation CDS 28199037 28199133 . + 2 Parent=GSCOCT00024011001 | |
| 12131 chr1 manual_curation gene 28200009 28223112 . - . ID=GSCOCG00024013001;Name=Cc01_g09530 | |
| 12132 chr1 manual_curation mRNA 28200009 28223112 . - . ID=GSCOCT00024013001;Parent=GSCOCG00024013001;Name=Cc01_g09530 | |
| 12133 chr1 manual_curation polypeptide 28200009 28223112 . - . ID=GSCOCP00024013001;Dbxref=InterPro:IPR006133,InterPro:IPR006134,InterPro:IPR012337,InterPro:IPR013697,InterPro:IPR022762,PFAM:PF00136,PFAM:PF03104,PFAM:PF08490,SMART:SM00486,SUPERFAMILY:SSF53098,SwissProt:O93845,SwissProt:Q07864,SwissProt:Q9WVF7,TAIR:AT1G08260.1,TAIR:AT2G27120.1,TrEMBL:B9MYH6,TrEMBL:B9SSU6,TrEMBL:F6GW32;Derives_from=GSCOCT00024013001;Name=Cc01_g09530;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,GO:0003677,GO:0003887,GO:0005634,GO:0006260,GO:0008270,CC_EC_number:2.7.7.7,PRODUCT:Putative DNA polymerase epsilon catalytic subunit A,CC_functional_completeness:complete,CC_gene:POLE,CC_gene:Pole,CC_gene:pol2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024013001~ Putative DNA polymerase epsilon catalytic subunit A~ POLE~ complete;original_location=complement(join(1191836..1191997%2C1191671..1191736%2C1191503..1191562%2C1191296..1191391%2C1189972..1190132%2C1189707..1189795%2C1189387..1189604%2C1187961..1188047%2C1187744..1187878%2C1186780..1186902%2C1186197..1186280%2C1185574..1185745%2C1185472..1185491%2C1185118..1185306%2C1184894..1184967%2C1184738..1184869%2C1184585..1184665%2C1184220..1184289%2C1183816..1183920%2C1182916..1183034%2C1182688..1182829%2C1182510..1182604%2C1182265..1182370%2C1182034..1182113%2C1181754..1181930%2C1181475..1181562%2C1181224..1181337%2C1180959..1181102%2C1179840..1179935%2C1179457..1179657%2C1178959..1179013%2C1178735..1178877%2C1178343..1178661%2C1178189..1178294%2C1177339..1177486%2C1177064..1177261%2C1176897..1176971%2C1175857..1176047%2C1175073..1175256%2C1174929..1174993%2C1173054..1173186%2C1172858..1172959%2C1172700..1172783%2C1172425..1172499%2C1172199..1172258%2C1171843..1172105%2C1171709..1171757%2C1171291..1171451%2C1171134..1171200%2C1170601..1170747%2C1170276..1170446%2C1169972..1170178%2C1169544..1169650%2C1168894..1169263));owner=coffea | |
| 12134 chr1 manual_curation exon 28200009 28200378 . - . Parent=GSCOCT00024013001 | |
| 12135 chr1 manual_curation exon 28200659 28200765 . - . Parent=GSCOCT00024013001 | |
| 12136 chr1 manual_curation exon 28201087 28201293 . - . Parent=GSCOCT00024013001 | |
| 12137 chr1 manual_curation exon 28201391 28201561 . - . Parent=GSCOCT00024013001 | |
| 12138 chr1 manual_curation exon 28201716 28201862 . - . Parent=GSCOCT00024013001 | |
| 12139 chr1 manual_curation exon 28202249 28202315 . - . Parent=GSCOCT00024013001 | |
| 12140 chr1 manual_curation exon 28202406 28202566 . - . Parent=GSCOCT00024013001 | |
| 12141 chr1 manual_curation exon 28202824 28202872 . - . Parent=GSCOCT00024013001 | |
| 12142 chr1 manual_curation exon 28202958 28203220 . - . Parent=GSCOCT00024013001 | |
| 12143 chr1 manual_curation exon 28203314 28203373 . - . Parent=GSCOCT00024013001 | |
| 12144 chr1 manual_curation exon 28203540 28203614 . - . Parent=GSCOCT00024013001 | |
| 12145 chr1 manual_curation exon 28203815 28203898 . - . Parent=GSCOCT00024013001 | |
| 12146 chr1 manual_curation exon 28203973 28204074 . - . Parent=GSCOCT00024013001 | |
| 12147 chr1 manual_curation exon 28204169 28204301 . - . Parent=GSCOCT00024013001 | |
| 12148 chr1 manual_curation exon 28206044 28206108 . - . Parent=GSCOCT00024013001 | |
| 12149 chr1 manual_curation exon 28206188 28206371 . - . Parent=GSCOCT00024013001 | |
| 12150 chr1 manual_curation exon 28206972 28207162 . - . Parent=GSCOCT00024013001 | |
| 12151 chr1 manual_curation exon 28208012 28208086 . - . Parent=GSCOCT00024013001 | |
| 12152 chr1 manual_curation exon 28208179 28208376 . - . Parent=GSCOCT00024013001 | |
| 12153 chr1 manual_curation exon 28208454 28208601 . - . Parent=GSCOCT00024013001 | |
| 12154 chr1 manual_curation exon 28209304 28209409 . - . Parent=GSCOCT00024013001 | |
| 12155 chr1 manual_curation exon 28209458 28209776 . - . Parent=GSCOCT00024013001 | |
| 12156 chr1 manual_curation exon 28209850 28209992 . - . Parent=GSCOCT00024013001 | |
| 12157 chr1 manual_curation exon 28210074 28210128 . - . Parent=GSCOCT00024013001 | |
| 12158 chr1 manual_curation exon 28210572 28210772 . - . Parent=GSCOCT00024013001 | |
| 12159 chr1 manual_curation exon 28210955 28211050 . - . Parent=GSCOCT00024013001 | |
| 12160 chr1 manual_curation exon 28212074 28212217 . - . Parent=GSCOCT00024013001 | |
| 12161 chr1 manual_curation exon 28212339 28212452 . - . Parent=GSCOCT00024013001 | |
| 12162 chr1 manual_curation exon 28212590 28212677 . - . Parent=GSCOCT00024013001 | |
| 12163 chr1 manual_curation exon 28212869 28213045 . - . Parent=GSCOCT00024013001 | |
| 12164 chr1 manual_curation exon 28213149 28213228 . - . Parent=GSCOCT00024013001 | |
| 12165 chr1 manual_curation exon 28213380 28213485 . - . Parent=GSCOCT00024013001 | |
| 12166 chr1 manual_curation exon 28213625 28213719 . - . Parent=GSCOCT00024013001 | |
| 12167 chr1 manual_curation exon 28213803 28213944 . - . Parent=GSCOCT00024013001 | |
| 12168 chr1 manual_curation exon 28214031 28214149 . - . Parent=GSCOCT00024013001 | |
| 12169 chr1 manual_curation exon 28214931 28215035 . - . Parent=GSCOCT00024013001 | |
| 12170 chr1 manual_curation exon 28215335 28215404 . - . Parent=GSCOCT00024013001 | |
| 12171 chr1 manual_curation exon 28215700 28215780 . - . Parent=GSCOCT00024013001 | |
| 12172 chr1 manual_curation exon 28215853 28215984 . - . Parent=GSCOCT00024013001 | |
| 12173 chr1 manual_curation exon 28216009 28216082 . - . Parent=GSCOCT00024013001 | |
| 12174 chr1 manual_curation exon 28216233 28216421 . - . Parent=GSCOCT00024013001 | |
| 12175 chr1 manual_curation exon 28216587 28216606 . - . Parent=GSCOCT00024013001 | |
| 12176 chr1 manual_curation exon 28216689 28216860 . - . Parent=GSCOCT00024013001 | |
| 12177 chr1 manual_curation exon 28217312 28217395 . - . Parent=GSCOCT00024013001 | |
| 12178 chr1 manual_curation exon 28217895 28218017 . - . Parent=GSCOCT00024013001 | |
| 12179 chr1 manual_curation exon 28218859 28218993 . - . Parent=GSCOCT00024013001 | |
| 12180 chr1 manual_curation exon 28219076 28219162 . - . Parent=GSCOCT00024013001 | |
| 12181 chr1 manual_curation exon 28220502 28220719 . - . Parent=GSCOCT00024013001 | |
| 12182 chr1 manual_curation exon 28220822 28220910 . - . Parent=GSCOCT00024013001 | |
| 12183 chr1 manual_curation exon 28221087 28221247 . - . Parent=GSCOCT00024013001 | |
| 12184 chr1 manual_curation exon 28222411 28222506 . - . Parent=GSCOCT00024013001 | |
| 12185 chr1 manual_curation exon 28222618 28222677 . - . Parent=GSCOCT00024013001 | |
| 12186 chr1 manual_curation exon 28222786 28222851 . - . Parent=GSCOCT00024013001 | |
| 12187 chr1 manual_curation exon 28222951 28223112 . - . Parent=GSCOCT00024013001 | |
| 12188 chr1 manual_curation CDS 28200009 28200378 . - 2 Parent=GSCOCT00024013001 | |
| 12189 chr1 manual_curation CDS 28200659 28200765 . - 0 Parent=GSCOCT00024013001 | |
| 12190 chr1 manual_curation CDS 28201087 28201293 . - 0 Parent=GSCOCT00024013001 | |
| 12191 chr1 manual_curation CDS 28201391 28201561 . - 0 Parent=GSCOCT00024013001 | |
| 12192 chr1 manual_curation CDS 28201716 28201862 . - 0 Parent=GSCOCT00024013001 | |
| 12193 chr1 manual_curation CDS 28202249 28202315 . - 2 Parent=GSCOCT00024013001 | |
| 12194 chr1 manual_curation CDS 28202406 28202566 . - 0 Parent=GSCOCT00024013001 | |
| 12195 chr1 manual_curation CDS 28202824 28202872 . - 2 Parent=GSCOCT00024013001 | |
| 12196 chr1 manual_curation CDS 28202958 28203220 . - 0 Parent=GSCOCT00024013001 | |
| 12197 chr1 manual_curation CDS 28203314 28203373 . - 0 Parent=GSCOCT00024013001 | |
| 12198 chr1 manual_curation CDS 28203540 28203614 . - 0 Parent=GSCOCT00024013001 | |
| 12199 chr1 manual_curation CDS 28203815 28203898 . - 0 Parent=GSCOCT00024013001 | |
| 12200 chr1 manual_curation CDS 28203973 28204074 . - 0 Parent=GSCOCT00024013001 | |
| 12201 chr1 manual_curation CDS 28204169 28204301 . - 2 Parent=GSCOCT00024013001 | |
| 12202 chr1 manual_curation CDS 28206044 28206108 . - 0 Parent=GSCOCT00024013001 | |
| 12203 chr1 manual_curation CDS 28206188 28206371 . - 2 Parent=GSCOCT00024013001 | |
| 12204 chr1 manual_curation CDS 28206972 28207162 . - 0 Parent=GSCOCT00024013001 | |
| 12205 chr1 manual_curation CDS 28208012 28208086 . - 0 Parent=GSCOCT00024013001 | |
| 12206 chr1 manual_curation CDS 28208179 28208376 . - 0 Parent=GSCOCT00024013001 | |
| 12207 chr1 manual_curation CDS 28208454 28208601 . - 2 Parent=GSCOCT00024013001 | |
| 12208 chr1 manual_curation CDS 28209304 28209409 . - 1 Parent=GSCOCT00024013001 | |
| 12209 chr1 manual_curation CDS 28209458 28209776 . - 0 Parent=GSCOCT00024013001 | |
| 12210 chr1 manual_curation CDS 28209850 28209992 . - 1 Parent=GSCOCT00024013001 | |
| 12211 chr1 manual_curation CDS 28210074 28210128 . - 0 Parent=GSCOCT00024013001 | |
| 12212 chr1 manual_curation CDS 28210572 28210772 . - 0 Parent=GSCOCT00024013001 | |
| 12213 chr1 manual_curation CDS 28210955 28211050 . - 0 Parent=GSCOCT00024013001 | |
| 12214 chr1 manual_curation CDS 28212074 28212217 . - 0 Parent=GSCOCT00024013001 | |
| 12215 chr1 manual_curation CDS 28212339 28212452 . - 0 Parent=GSCOCT00024013001 | |
| 12216 chr1 manual_curation CDS 28212590 28212677 . - 2 Parent=GSCOCT00024013001 | |
| 12217 chr1 manual_curation CDS 28212869 28213045 . - 2 Parent=GSCOCT00024013001 | |
| 12218 chr1 manual_curation CDS 28213149 28213228 . - 0 Parent=GSCOCT00024013001 | |
| 12219 chr1 manual_curation CDS 28213380 28213485 . - 2 Parent=GSCOCT00024013001 | |
| 12220 chr1 manual_curation CDS 28213625 28213719 . - 0 Parent=GSCOCT00024013001 | |
| 12221 chr1 manual_curation CDS 28213803 28213944 . - 2 Parent=GSCOCT00024013001 | |
| 12222 chr1 manual_curation CDS 28214031 28214149 . - 0 Parent=GSCOCT00024013001 | |
| 12223 chr1 manual_curation CDS 28214931 28215035 . - 0 Parent=GSCOCT00024013001 | |
| 12224 chr1 manual_curation CDS 28215335 28215404 . - 2 Parent=GSCOCT00024013001 | |
| 12225 chr1 manual_curation CDS 28215700 28215780 . - 2 Parent=GSCOCT00024013001 | |
| 12226 chr1 manual_curation CDS 28215853 28215984 . - 2 Parent=GSCOCT00024013001 | |
| 12227 chr1 manual_curation CDS 28216009 28216082 . - 0 Parent=GSCOCT00024013001 | |
| 12228 chr1 manual_curation CDS 28216233 28216421 . - 0 Parent=GSCOCT00024013001 | |
| 12229 chr1 manual_curation CDS 28216587 28216606 . - 1 Parent=GSCOCT00024013001 | |
| 12230 chr1 manual_curation CDS 28216689 28216860 . - 0 Parent=GSCOCT00024013001 | |
| 12231 chr1 manual_curation CDS 28217312 28217395 . - 0 Parent=GSCOCT00024013001 | |
| 12232 chr1 manual_curation CDS 28217895 28218017 . - 0 Parent=GSCOCT00024013001 | |
| 12233 chr1 manual_curation CDS 28218859 28218993 . - 0 Parent=GSCOCT00024013001 | |
| 12234 chr1 manual_curation CDS 28219076 28219162 . - 0 Parent=GSCOCT00024013001 | |
| 12235 chr1 manual_curation CDS 28220502 28220719 . - 1 Parent=GSCOCT00024013001 | |
| 12236 chr1 manual_curation CDS 28220822 28220910 . - 2 Parent=GSCOCT00024013001 | |
| 12237 chr1 manual_curation CDS 28221087 28221247 . - 0 Parent=GSCOCT00024013001 | |
| 12238 chr1 manual_curation CDS 28222411 28222506 . - 0 Parent=GSCOCT00024013001 | |
| 12239 chr1 manual_curation CDS 28222618 28222677 . - 0 Parent=GSCOCT00024013001 | |
| 12240 chr1 manual_curation CDS 28222786 28222851 . - 0 Parent=GSCOCT00024013001 | |
| 12241 chr1 manual_curation CDS 28222951 28223112 . - 0 Parent=GSCOCT00024013001 | |
| 12242 chr1 manual_curation gene 28225767 28227636 . + . ID=GSCOCG00024014001;Name=Cc01_g09540 | |
| 12243 chr1 manual_curation mRNA 28225767 28227636 . + . ID=GSCOCT00024014001;Parent=GSCOCG00024014001;Name=Cc01_g09540 | |
| 12244 chr1 manual_curation polypeptide 28226049 28227373 . + . ID=GSCOCP00024014001;Dbxref=InterPro:IPR001813,PFAM:PF00428,SwissProt:O24415,SwissProt:P41099,SwissProt:Q9LXM8,TAIR:AT2G27710.1,TAIR:AT3G28500.1,TAIR:AT3G44590.2,TrEMBL:A9PAR7,TrEMBL:A9PCM7,TrEMBL:D7TJ45;Derives_from=GSCOCT00024014001;Name=Cc01_g09540;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006414,CC_EC_number:missing_EC_number,PRODUCT:60S acidic ribosomal protein P2B,CC_functional_completeness:complete,CC_gene:RPP2B,CC_gene:RPP2D;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024014001~ 60S acidic ribosomal protein P2B~ RPP2B~ complete;original_location=join(1194934..1195021%2C1195911..1196140%2C1196232..1196258);owner=coffea | |
| 12245 chr1 manual_curation exon 28225767 28225901 . + . Parent=GSCOCT00024014001 | |
| 12246 chr1 manual_curation exon 28226047 28226136 . + . Parent=GSCOCT00024014001 | |
| 12247 chr1 manual_curation exon 28227026 28227255 . + . Parent=GSCOCT00024014001 | |
| 12248 chr1 manual_curation exon 28227347 28227636 . + . Parent=GSCOCT00024014001 | |
| 12249 chr1 manual_curation CDS 28226049 28226136 . + 0 Parent=GSCOCT00024014001 | |
| 12250 chr1 manual_curation CDS 28227026 28227255 . + 1 Parent=GSCOCT00024014001 | |
| 12251 chr1 manual_curation CDS 28227347 28227373 . + 0 Parent=GSCOCT00024014001 | |
| 12252 chr1 manual_curation gene 28229954 28237078 . - . ID=GSCOCG00024015001;Name=Cc01_g09550 | |
| 12253 chr1 manual_curation mRNA 28229954 28237078 . - . ID=GSCOCT00024015001;Parent=GSCOCG00024015001;Name=Cc01_g09550 | |
| 12254 chr1 manual_curation polypeptide 28229954 28237078 . - . ID=GSCOCP00024015001;Dbxref=GENE3D:G3DSA:2.130.10.10,GENE3D:G3DSA:2.40.100.10,InterPro:IPR001680,InterPro:IPR002130,InterPro:IPR011046,InterPro:IPR015891,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019781,InterPro:IPR019782,InterPro:IPR020892,PFAM:PF00160,PFAM:PF00400,PRINTS:PR00153,PROFILE:PS50072,PROFILE:PS50082,PROFILE:PS50294,PROSITE:PS00170,SMART:SM00320,SUPERFAMILY:SSF50891,SUPERFAMILY:SSF50978,SwissProt:Q29RZ2,SwissProt:Q8CEC6,SwissProt:Q96BP3,TAIR:AT1G01940.1,TAIR:AT2G36130.1,TAIR:AT3G44600.1,TrEMBL:B9HQV4,TrEMBL:B9SSV2,TrEMBL:I1M4E9;Derives_from=GSCOCT00024015001;Name=Cc01_g09550;Ontology_term=CC_evidence_code:ISS,GO:0003755,GO:0006457,CC_EC_number:5.2.1.8,PRODUCT:Peptidylprolyl isomerase domain and WD repeat-containing protein 1,CC_functional_completeness:complete,CC_gene:PPWD1,CC_gene:Ppwd1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024015001~ Peptidylprolyl isomerase domain and WD repeat-containing protein 1~ PPWD1~ complete;original_location=complement(join(1205785..1205963%2C1204965..1205050%2C1204102..1204190%2C1203156..1203395%2C1202925..1203046%2C1202548..1202623%2C1202231..1202338%2C1201967..1202143%2C1201604..1201821%2C1200987..1201119%2C1200249..1200472%2C1199098..1199251%2C1198839..1198922));owner=coffea | |
| 12255 chr1 manual_curation exon 28229954 28230037 . - . Parent=GSCOCT00024015001 | |
| 12256 chr1 manual_curation exon 28230213 28230366 . - . Parent=GSCOCT00024015001 | |
| 12257 chr1 manual_curation exon 28231364 28231587 . - . Parent=GSCOCT00024015001 | |
| 12258 chr1 manual_curation exon 28232102 28232234 . - . Parent=GSCOCT00024015001 | |
| 12259 chr1 manual_curation exon 28232719 28232936 . - . Parent=GSCOCT00024015001 | |
| 12260 chr1 manual_curation exon 28233082 28233258 . - . Parent=GSCOCT00024015001 | |
| 12261 chr1 manual_curation exon 28233346 28233453 . - . Parent=GSCOCT00024015001 | |
| 12262 chr1 manual_curation exon 28233663 28233738 . - . Parent=GSCOCT00024015001 | |
| 12263 chr1 manual_curation exon 28234040 28234161 . - . Parent=GSCOCT00024015001 | |
| 12264 chr1 manual_curation exon 28234271 28234510 . - . Parent=GSCOCT00024015001 | |
| 12265 chr1 manual_curation exon 28235217 28235305 . - . Parent=GSCOCT00024015001 | |
| 12266 chr1 manual_curation exon 28236080 28236165 . - . Parent=GSCOCT00024015001 | |
| 12267 chr1 manual_curation exon 28236900 28237078 . - . Parent=GSCOCT00024015001 | |
| 12268 chr1 manual_curation CDS 28229954 28230037 . - 0 Parent=GSCOCT00024015001 | |
| 12269 chr1 manual_curation CDS 28230213 28230366 . - 2 Parent=GSCOCT00024015001 | |
| 12270 chr1 manual_curation CDS 28231364 28231587 . - 0 Parent=GSCOCT00024015001 | |
| 12271 chr1 manual_curation CDS 28232102 28232234 . - 2 Parent=GSCOCT00024015001 | |
| 12272 chr1 manual_curation CDS 28232719 28232936 . - 0 Parent=GSCOCT00024015001 | |
| 12273 chr1 manual_curation CDS 28233082 28233258 . - 0 Parent=GSCOCT00024015001 | |
| 12274 chr1 manual_curation CDS 28233346 28233453 . - 0 Parent=GSCOCT00024015001 | |
| 12275 chr1 manual_curation CDS 28233663 28233738 . - 2 Parent=GSCOCT00024015001 | |
| 12276 chr1 manual_curation CDS 28234040 28234161 . - 0 Parent=GSCOCT00024015001 | |
| 12277 chr1 manual_curation CDS 28234271 28234510 . - 0 Parent=GSCOCT00024015001 | |
| 12278 chr1 manual_curation CDS 28235217 28235305 . - 1 Parent=GSCOCT00024015001 | |
| 12279 chr1 manual_curation CDS 28236080 28236165 . - 2 Parent=GSCOCT00024015001 | |
| 12280 chr1 manual_curation CDS 28236900 28237078 . - 0 Parent=GSCOCT00024015001 | |
| 12281 chr1 manual_curation gene 28242176 28246850 . - . ID=GSCOCG00024016001;Name=Cc01_g09560 | |
| 12282 chr1 manual_curation mRNA 28242176 28246850 . - . ID=GSCOCT00024016001;Parent=GSCOCG00024016001;Name=Cc01_g09560 | |
| 12283 chr1 manual_curation polypeptide 28242176 28246729 . - . ID=GSCOCP00024016001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:A2YBX5,SwissProt:Q05999,SwissProt:Q0DCT8,TAIR:AT3G27580.1,TAIR:AT3G44610.1,TAIR:AT5G47750.1,TrEMBL:A5BGQ8,TrEMBL:F6GW35,TrEMBL:I1LTS9;Derives_from=GSCOCT00024016001;Name=Cc01_g09560;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.13,PRODUCT:Protein kinase G11A,CC_functional_completeness:fragment,CC_gene:Os06g0291600,CC_gene:OsI_021818,CC_gene:PK7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024016001~ Protein kinase G11A~ Os06g0291600~ fragment;original_location=complement(join(1214953..1215614%2C1211061..1211868));owner=coffea | |
| 12284 chr1 manual_curation exon 28242176 28242983 . - . Parent=GSCOCT00024016001 | |
| 12285 chr1 manual_curation exon 28246068 28246850 . - . Parent=GSCOCT00024016001 | |
| 12286 chr1 manual_curation CDS 28242176 28242983 . - 2 Parent=GSCOCT00024016001 | |
| 12287 chr1 manual_curation CDS 28246068 28246729 . - 0 Parent=GSCOCT00024016001 | |
| 12288 chr1 manual_curation gene 28256622 28262175 . + . ID=GSCOCG00024017001;Name=Cc01_g09570 | |
| 12289 chr1 manual_curation mRNA 28256622 28262175 . + . ID=GSCOCT00024017001;Parent=GSCOCG00024017001;Name=Cc01_g09570 | |
| 12290 chr1 manual_curation polypeptide 28258247 28261998 . + . ID=GSCOCP00024017001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:A2YBX5,SwissProt:P15792,SwissProt:Q0DCT8,TAIR:AT5G03640.1,TAIR:AT5G47750.1,TAIR:AT5G55910.1,TrEMBL:B9SSV4,TrEMBL:F6GW37,TrEMBL:I1KFW5;Derives_from=GSCOCT00024017001;Name=Cc01_g09570;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.1,PRODUCT:D6 protein kinase,CC_functional_completeness:modules,CC_gene:Os06g0291600,CC_gene:OsI_021818;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024017001~ D6 protein kinase~ Os06g0291600~ modules;original_location=join(1227132..1228837%2C1230016..1230883);owner=coffea | |
| 12291 chr1 manual_curation exon 28256622 28257198 . + . Parent=GSCOCT00024017001 | |
| 12292 chr1 manual_curation exon 28258029 28259952 . + . Parent=GSCOCT00024017001 | |
| 12293 chr1 manual_curation exon 28261131 28262175 . + . Parent=GSCOCT00024017001 | |
| 12294 chr1 manual_curation CDS 28258247 28259952 . + 0 Parent=GSCOCT00024017001 | |
| 12295 chr1 manual_curation CDS 28261131 28261998 . + 2 Parent=GSCOCT00024017001 | |
| 12296 chr1 manual_curation gene 28262779 28266150 . + . ID=GSCOCG00024018001;Name=Cc01_g09580 | |
| 12297 chr1 manual_curation mRNA 28262779 28266150 . + . ID=GSCOCT00024018001;Parent=GSCOCG00024018001;Name=Cc01_g09580 | |
| 12298 chr1 manual_curation polypeptide 28263209 28265394 . + . ID=GSCOCP00024018001;Dbxref=InterPro:IPR000106,InterPro:IPR017867,PANTHER:PTHR11717,PFAM:PF01451,PRINTS:PR00719,SMART:SM00226,SUPERFAMILY:SSF52788,SwissProt:P41893,SwissProt:P53433,SwissProt:Q55535,TAIR:AT3G44620.2,TrEMBL:B9SSV5,TrEMBL:D7SN33,TrEMBL:G7JKW9;Derives_from=GSCOCT00024018001;Name=Cc01_g09580;Ontology_term=CC_evidence_code:ISS,GO:0004725,GO:0006470,CC_EC_number:3.1.3.48,PRODUCT:Putative low molecular weight protein-tyrosine-phosphatase slr0328,CC_functional_completeness:complete,CC_gene:slr0328,CC_gene:stp1,CC_gene:ptpA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024018001~ Putative low molecular weight protein-tyrosine-phosphatase slr0328~ slr0328~ complete;original_location=join(1232094..1232279%2C1232426..1232561%2C1232799..1232866%2C1232941..1233027%2C1234199..1234279);owner=coffea | |
| 12299 chr1 manual_curation exon 28262779 28263394 . + . Parent=GSCOCT00024018001 | |
| 12300 chr1 manual_curation exon 28263541 28263676 . + . Parent=GSCOCT00024018001 | |
| 12301 chr1 manual_curation exon 28263914 28263981 . + . Parent=GSCOCT00024018001 | |
| 12302 chr1 manual_curation exon 28264056 28264142 . + . Parent=GSCOCT00024018001 | |
| 12303 chr1 manual_curation exon 28265314 28266150 . + . Parent=GSCOCT00024018001 | |
| 12304 chr1 manual_curation CDS 28263209 28263394 . + 0 Parent=GSCOCT00024018001 | |
| 12305 chr1 manual_curation CDS 28263541 28263676 . + 0 Parent=GSCOCT00024018001 | |
| 12306 chr1 manual_curation CDS 28263914 28263981 . + 1 Parent=GSCOCT00024018001 | |
| 12307 chr1 manual_curation CDS 28264056 28264142 . + 0 Parent=GSCOCT00024018001 | |
| 12308 chr1 manual_curation CDS 28265314 28265394 . + 0 Parent=GSCOCT00024018001 | |
| 12309 chr1 manual_curation gene 28266297 28271562 . - . ID=GSCOCG00024019001;Name=Cc01_g09590 | |
| 12310 chr1 manual_curation mRNA 28266297 28271562 . - . ID=GSCOCT00024019001;Parent=GSCOCG00024019001;Name=Cc01_g09590 | |
| 12311 chr1 manual_curation polypeptide 28266297 28270930 . - . ID=GSCOCP00024019001;Dbxref=InterPro:IPR006937,InterPro:IPR008928,PFAM:PF04853,SUPERFAMILY:SSF48208,TAIR:AT1G56560.1,TAIR:AT3G06500.1,TAIR:AT5G22510.1,TrEMBL:F6GW38,TrEMBL:F6I5X0,TrEMBL:Q6JJ23;Derives_from=GSCOCT00024019001;Name=Cc01_g09590;Ontology_term=CC_evidence_code:ISS,GO:0003824,CC_EC_number:missing_EC_number,PRODUCT:alkaline/neutral invertase,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024019001~ alkaline/neutral invertase~ unknown_gene~ modules;original_location=complement(join(1239138..1239815%2C1237628..1237793%2C1237311..1237522%2C1236511..1237004%2C1236380..1236428%2C1235182..1235505));owner=coffea | |
| 12312 chr1 manual_curation exon 28271184 28271562 . - . Parent=GSCOCT00024019001 | |
| 12313 chr1 manual_curation exon 28266297 28266620 . - . Parent=GSCOCT00024019001 | |
| 12314 chr1 manual_curation exon 28267495 28267543 . - . Parent=GSCOCT00024019001 | |
| 12315 chr1 manual_curation exon 28267626 28268119 . - . Parent=GSCOCT00024019001 | |
| 12316 chr1 manual_curation exon 28268426 28268637 . - . Parent=GSCOCT00024019001 | |
| 12317 chr1 manual_curation exon 28268743 28268908 . - . Parent=GSCOCT00024019001 | |
| 12318 chr1 manual_curation exon 28270253 28270978 . - . Parent=GSCOCT00024019001 | |
| 12319 chr1 manual_curation CDS 28266297 28266620 . - 0 Parent=GSCOCT00024019001 | |
| 12320 chr1 manual_curation CDS 28267495 28267543 . - 2 Parent=GSCOCT00024019001 | |
| 12321 chr1 manual_curation CDS 28267626 28268119 . - 0 Parent=GSCOCT00024019001 | |
| 12322 chr1 manual_curation CDS 28268426 28268637 . - 1 Parent=GSCOCT00024019001 | |
| 12323 chr1 manual_curation CDS 28268743 28268908 . - 0 Parent=GSCOCT00024019001 | |
| 12324 chr1 manual_curation CDS 28270253 28270930 . - 0 Parent=GSCOCT00024019001 | |
| 12325 chr1 manual_curation gene 28272140 28278170 . - . ID=GSCOCG00024020001;Name=Cc01_g09600 | |
| 12326 chr1 manual_curation mRNA 28272140 28278170 . - . ID=GSCOCT00024020001;Parent=GSCOCG00024020001;Name=Cc01_g09600 | |
| 12327 chr1 manual_curation polypeptide 28272543 28277932 . - . ID=GSCOCP00024020001;Dbxref=GENE3D:G3DSA:3.40.800.20,InterPro:IPR000286,InterPro:IPR003084,PANTHER:PTHR10625,PANTHER:PTHR10625:SF28,PFAM:PF00850,PIR:PIRSF037913,PRINTS:PR01270,PRINTS:PR01271,SwissProt:O42227,SwissProt:P56517,SwissProt:Q8H0W2,TAIR:AT3G44680.1,TAIR:AT4G38130.1,TAIR:AT5G63110.1,TrEMBL:B9GGG8,TrEMBL:B9SSV7,TrEMBL:G7JKX4;Derives_from=GSCOCT00024020001;Name=Cc01_g09600;Ontology_term=CC_evidence_code:ISS,GO:0004407,GO:0016575,CC_EC_number:missing_EC_number,PRODUCT:Histone deacetylase 9,CC_functional_completeness:complete,CC_gene:HDA9,CC_gene:HDAC1,CC_gene:hdac1-b;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024020001~ Histone deacetylase 9~ HDA9~ complete;original_location=complement(join(1246781..1246817%2C1246566..1246678%2C1246350..1246467%2C1245868..1245942%2C1245563..1245782%2C1244703..1244766%2C1243436..1243528%2C1243160..1243268%2C1242977..1243026%2C1242799..1242889%2C1242434..1242504%2C1242099..1242197%2C1241647..1241713%2C1241428..1241513));owner=coffea | |
| 12328 chr1 manual_curation exon 28272140 28272628 . - . Parent=GSCOCT00024020001 | |
| 12329 chr1 manual_curation exon 28272762 28272828 . - . Parent=GSCOCT00024020001 | |
| 12330 chr1 manual_curation exon 28273214 28273312 . - . Parent=GSCOCT00024020001 | |
| 12331 chr1 manual_curation exon 28273549 28273619 . - . Parent=GSCOCT00024020001 | |
| 12332 chr1 manual_curation exon 28273914 28274004 . - . Parent=GSCOCT00024020001 | |
| 12333 chr1 manual_curation exon 28274092 28274141 . - . Parent=GSCOCT00024020001 | |
| 12334 chr1 manual_curation exon 28274275 28274383 . - . Parent=GSCOCT00024020001 | |
| 12335 chr1 manual_curation exon 28274551 28274643 . - . Parent=GSCOCT00024020001 | |
| 12336 chr1 manual_curation exon 28275818 28275881 . - . Parent=GSCOCT00024020001 | |
| 12337 chr1 manual_curation exon 28276678 28276897 . - . Parent=GSCOCT00024020001 | |
| 12338 chr1 manual_curation exon 28276983 28277057 . - . Parent=GSCOCT00024020001 | |
| 12339 chr1 manual_curation exon 28277465 28277582 . - . Parent=GSCOCT00024020001 | |
| 12340 chr1 manual_curation exon 28277681 28277793 . - . Parent=GSCOCT00024020001 | |
| 12341 chr1 manual_curation exon 28277896 28278170 . - . Parent=GSCOCT00024020001 | |
| 12342 chr1 manual_curation CDS 28272543 28272628 . - 1 Parent=GSCOCT00024020001 | |
| 12343 chr1 manual_curation CDS 28272762 28272828 . - 0 Parent=GSCOCT00024020001 | |
| 12344 chr1 manual_curation CDS 28273214 28273312 . - 0 Parent=GSCOCT00024020001 | |
| 12345 chr1 manual_curation CDS 28273549 28273619 . - 1 Parent=GSCOCT00024020001 | |
| 12346 chr1 manual_curation CDS 28273914 28274004 . - 0 Parent=GSCOCT00024020001 | |
| 12347 chr1 manual_curation CDS 28274092 28274141 . - 1 Parent=GSCOCT00024020001 | |
| 12348 chr1 manual_curation CDS 28274275 28274383 . - 0 Parent=GSCOCT00024020001 | |
| 12349 chr1 manual_curation CDS 28274551 28274643 . - 0 Parent=GSCOCT00024020001 | |
| 12350 chr1 manual_curation CDS 28275818 28275881 . - 2 Parent=GSCOCT00024020001 | |
| 12351 chr1 manual_curation CDS 28276678 28276897 . - 1 Parent=GSCOCT00024020001 | |
| 12352 chr1 manual_curation CDS 28276983 28277057 . - 1 Parent=GSCOCT00024020001 | |
| 12353 chr1 manual_curation CDS 28277465 28277582 . - 0 Parent=GSCOCT00024020001 | |
| 12354 chr1 manual_curation CDS 28277681 28277793 . - 1 Parent=GSCOCT00024020001 | |
| 12355 chr1 manual_curation CDS 28277896 28277932 . - 0 Parent=GSCOCT00024020001 | |
| 12356 chr1 manual_curation gene 28289613 28292326 . - . ID=GSCOCG00024022001;Name=Cc01_g09610 | |
| 12357 chr1 manual_curation mRNA 28289613 28292326 . - . ID=GSCOCT00024022001;Parent=GSCOCG00024022001;Name=Cc01_g09610 | |
| 12358 chr1 manual_curation polypeptide 28289856 28290154 . - . ID=GSCOCP00024022001;Dbxref=InterPro:IPR003177,PFAM:PF02238,TAIR:AT4G21105.1,TrEMBL:C6SVP8,TrEMBL:C6SWY1,TrEMBL:I1LKU8;Derives_from=GSCOCT00024022001;Name=Cc01_g09610;Ontology_term=CC_evidence_code:ISS,GO:0004129,GO:0005746,GO:0009055,CC_EC_number:missing_EC_number,PRODUCT:cytochrome-c oxidases%3Belectron carriers,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024022001~ cytochrome-c oxidases%3Belectron carriers~ unknown_gene~ complete;original_location=complement(join(1258884..1259039%2C1258741..1258788));owner=coffea | |
| 12359 chr1 manual_curation exon 28292198 28292326 . - . Parent=GSCOCT00024022001 | |
| 12360 chr1 manual_curation exon 28289613 28289903 . - . Parent=GSCOCT00024022001 | |
| 12361 chr1 manual_curation exon 28289999 28290155 . - . Parent=GSCOCT00024022001 | |
| 12362 chr1 manual_curation CDS 28289856 28289903 . - 0 Parent=GSCOCT00024022001 | |
| 12363 chr1 manual_curation CDS 28289999 28290154 . - 0 Parent=GSCOCT00024022001 | |
| 12364 chr1 manual_curation gene 28305118 28312627 . + . ID=GSCOCG00024023001;Name=Cc01_g09620 | |
| 12365 chr1 manual_curation mRNA 28305118 28312627 . + . ID=GSCOCT00024023001;Parent=GSCOCG00024023001;Name=Cc01_g09620 | |
| 12366 chr1 manual_curation polypeptide 28305368 28312326 . + . ID=GSCOCP00024023001;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR013525,InterPro:IPR013581,PFAM:PF00005,PFAM:PF01061,PFAM:PF08370,PROFILE:PS50893,SMART:SM00382,SwissProt:Q2PCF1,SwissProt:Q7PC84,SwissProt:Q7PC87,TAIR:AT1G15520.1,TAIR:AT1G66950.1,TAIR:AT2G36380.1,TrEMBL:A5C1Y5,TrEMBL:D7SN38,TrEMBL:F6GW39;Derives_from=GSCOCT00024023001;Name=Cc01_g09620;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0016020,GO:0016887,GO:0017111,CC_EC_number:3.6.3.28,CC_EC_number:3.6.3.28,PRODUCT:Pleiotropic drug resistance protein 2,CC_functional_completeness:complete,CC_gene:PDR2,CC_gene:ABCG34,CC_gene:ABCG39;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024023001~ Pleiotropic drug resistance protein 2~ PDR2~ complete;original_location=join(1274253..1274326%2C1274545..1274704%2C1275042..1275130%2C1275283..1275367%2C1275456..1275746%2C1275829..1275919%2C1276163..1277063%2C1277160..1277320%2C1277495..1277598%2C1277710..1277866%2C1277974..1278058%2C1278349..1278538%2C1278666..1278998%2C1279129..1279419%2C1279499..1279582%2C1279680..1279813%2C1279917..1280144%2C1280251..1280422%2C1280537..1280791%2C1280939..1281211);owner=coffea | |
| 12367 chr1 manual_curation exon 28305118 28305441 . + . Parent=GSCOCT00024023001 | |
| 12368 chr1 manual_curation exon 28305660 28305819 . + . Parent=GSCOCT00024023001 | |
| 12369 chr1 manual_curation exon 28306157 28306245 . + . Parent=GSCOCT00024023001 | |
| 12370 chr1 manual_curation exon 28306398 28306482 . + . Parent=GSCOCT00024023001 | |
| 12371 chr1 manual_curation exon 28306571 28306861 . + . Parent=GSCOCT00024023001 | |
| 12372 chr1 manual_curation exon 28306944 28307034 . + . Parent=GSCOCT00024023001 | |
| 12373 chr1 manual_curation exon 28307278 28308178 . + . Parent=GSCOCT00024023001 | |
| 12374 chr1 manual_curation exon 28308275 28308435 . + . Parent=GSCOCT00024023001 | |
| 12375 chr1 manual_curation exon 28308610 28308713 . + . Parent=GSCOCT00024023001 | |
| 12376 chr1 manual_curation exon 28308825 28308981 . + . Parent=GSCOCT00024023001 | |
| 12377 chr1 manual_curation exon 28309089 28309173 . + . Parent=GSCOCT00024023001 | |
| 12378 chr1 manual_curation exon 28309464 28309653 . + . Parent=GSCOCT00024023001 | |
| 12379 chr1 manual_curation exon 28309781 28310113 . + . Parent=GSCOCT00024023001 | |
| 12380 chr1 manual_curation exon 28310244 28310534 . + . Parent=GSCOCT00024023001 | |
| 12381 chr1 manual_curation exon 28310614 28310697 . + . Parent=GSCOCT00024023001 | |
| 12382 chr1 manual_curation exon 28310795 28310928 . + . Parent=GSCOCT00024023001 | |
| 12383 chr1 manual_curation exon 28311032 28311259 . + . Parent=GSCOCT00024023001 | |
| 12384 chr1 manual_curation exon 28311366 28311537 . + . Parent=GSCOCT00024023001 | |
| 12385 chr1 manual_curation exon 28311652 28311906 . + . Parent=GSCOCT00024023001 | |
| 12386 chr1 manual_curation exon 28312054 28312627 . + . Parent=GSCOCT00024023001 | |
| 12387 chr1 manual_curation CDS 28305368 28305441 . + 0 Parent=GSCOCT00024023001 | |
| 12388 chr1 manual_curation CDS 28305660 28305819 . + 2 Parent=GSCOCT00024023001 | |
| 12389 chr1 manual_curation CDS 28306157 28306245 . + 0 Parent=GSCOCT00024023001 | |
| 12390 chr1 manual_curation CDS 28306398 28306482 . + 2 Parent=GSCOCT00024023001 | |
| 12391 chr1 manual_curation CDS 28306571 28306861 . + 0 Parent=GSCOCT00024023001 | |
| 12392 chr1 manual_curation CDS 28306944 28307034 . + 0 Parent=GSCOCT00024023001 | |
| 12393 chr1 manual_curation CDS 28307278 28308178 . + 1 Parent=GSCOCT00024023001 | |
| 12394 chr1 manual_curation CDS 28308275 28308435 . + 2 Parent=GSCOCT00024023001 | |
| 12395 chr1 manual_curation CDS 28308610 28308713 . + 1 Parent=GSCOCT00024023001 | |
| 12396 chr1 manual_curation CDS 28308825 28308981 . + 0 Parent=GSCOCT00024023001 | |
| 12397 chr1 manual_curation CDS 28309089 28309173 . + 1 Parent=GSCOCT00024023001 | |
| 12398 chr1 manual_curation CDS 28309464 28309653 . + 2 Parent=GSCOCT00024023001 | |
| 12399 chr1 manual_curation CDS 28309781 28310113 . + 0 Parent=GSCOCT00024023001 | |
| 12400 chr1 manual_curation CDS 28310244 28310534 . + 0 Parent=GSCOCT00024023001 | |
| 12401 chr1 manual_curation CDS 28310614 28310697 . + 0 Parent=GSCOCT00024023001 | |
| 12402 chr1 manual_curation CDS 28310795 28310928 . + 0 Parent=GSCOCT00024023001 | |
| 12403 chr1 manual_curation CDS 28311032 28311259 . + 2 Parent=GSCOCT00024023001 | |
| 12404 chr1 manual_curation CDS 28311366 28311537 . + 2 Parent=GSCOCT00024023001 | |
| 12405 chr1 manual_curation CDS 28311652 28311906 . + 0 Parent=GSCOCT00024023001 | |
| 12406 chr1 manual_curation CDS 28312054 28312326 . + 0 Parent=GSCOCT00024023001 | |
| 12407 chr1 manual_curation gene 28313219 28318501 . - . ID=GSCOCG00024024001;Name=Cc01_g09630 | |
| 12408 chr1 manual_curation mRNA 28313219 28318501 . - . ID=GSCOCT00024024001;Parent=GSCOCG00024024001;Name=Cc01_g09630 | |
| 12409 chr1 manual_curation polypeptide 28313559 28317098 . - . ID=GSCOCP00024024001;Dbxref=InterPro:IPR005380,PFAM:PF03468,TAIR:AT3G22430.1,TrEMBL:A0PAD3,TrEMBL:D7SN41,TrEMBL:Q6JJ25;Derives_from=GSCOCT00024024001;Name=Cc01_g09630;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative CONTAINS InterPro DOMAIN/s,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024024001~ Putative CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380)%3B BEST Arabidopsis thaliana protein match is: XS domain-containing protein / XS zinc finger domain-containing protein-related (TAIR:AT5G23570.1)%3B Has 565 Blast hits to 510 proteins in 121 species: Archae - 2%3B Bacteria - 90%3B Metazoa - 191%3B Fungi - 32%3B Plants - 51%3B Viruses - 4%3B Other Eukaryotes - 195 (source: NCBI BLink).~ unknown_gene~ fragment;original_location=complement(join(1285847..1285983%2C1283572..1283876%2C1282444..1282784));owner=coffea | |
| 12410 chr1 manual_curation exon 28313219 28313899 . - . Parent=GSCOCT00024024001 | |
| 12411 chr1 manual_curation exon 28314687 28314991 . - . Parent=GSCOCT00024024001 | |
| 12412 chr1 manual_curation exon 28316962 28318501 . - . Parent=GSCOCT00024024001 | |
| 12413 chr1 manual_curation CDS 28313559 28313899 . - 1 Parent=GSCOCT00024024001 | |
| 12414 chr1 manual_curation CDS 28314687 28314991 . - 2 Parent=GSCOCT00024024001 | |
| 12415 chr1 manual_curation CDS 28316962 28317098 . - 0 Parent=GSCOCT00024024001 | |
| 12416 chr1 manual_curation gene 28328504 28330393 . + . ID=GSCOCG00024027001;Name=Cc01_g09640 | |
| 12417 chr1 manual_curation mRNA 28328504 28330393 . + . ID=GSCOCT00024027001;Parent=GSCOCG00024027001;Name=Cc01_g09640 | |
| 12418 chr1 manual_curation polypeptide 28328595 28330006 . + . ID=GSCOCP00024027001;Dbxref=InterPro:IPR007033,PANTHER:PTHR21470,PFAM:PF04949,TAIR:AT2G27740.1,TAIR:AT2G36410.1,TAIR:AT3G09980.1,TrEMBL:B9SSW3,TrEMBL:D7SN42,TrEMBL:I1LRD5;Derives_from=GSCOCT00024027001;Name=Cc01_g09640;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Family of unknown function (DUF662) ,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024027001~ Family of unknown function (DUF662) ~ unknown_gene~ complete;original_location=join(1297480..1297737%2C1298230..1298340%2C1298622..1298702%2C1298817..1298891);owner=coffea | |
| 12419 chr1 manual_curation exon 28328504 28328852 . + . Parent=GSCOCT00024027001 | |
| 12420 chr1 manual_curation exon 28329345 28329455 . + . Parent=GSCOCT00024027001 | |
| 12421 chr1 manual_curation exon 28329737 28329817 . + . Parent=GSCOCT00024027001 | |
| 12422 chr1 manual_curation exon 28329932 28330393 . + . Parent=GSCOCT00024027001 | |
| 12423 chr1 manual_curation CDS 28328595 28328852 . + 0 Parent=GSCOCT00024027001 | |
| 12424 chr1 manual_curation CDS 28329345 28329455 . + 0 Parent=GSCOCT00024027001 | |
| 12425 chr1 manual_curation CDS 28329737 28329817 . + 0 Parent=GSCOCT00024027001 | |
| 12426 chr1 manual_curation CDS 28329932 28330006 . + 0 Parent=GSCOCT00024027001 | |
| 12427 chr1 manual_curation gene 28332560 28333912 . - . ID=GSCOCG00024028001;Name=Cc01_g09650 | |
| 12428 chr1 manual_curation mRNA 28332560 28333912 . - . ID=GSCOCT00024028001;Parent=GSCOCG00024028001;Name=Cc01_g09650 | |
| 12429 chr1 manual_curation polypeptide 28332560 28333912 . - . ID=GSCOCP00024028001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,SwissProt:Q5NTH0,SwissProt:Q8GVE3,SwissProt:Q9LSM0,TAIR:AT2G22590.1,TAIR:AT5G49690.1,TAIR:AT5G65550.1,TrEMBL:F6GW41,TrEMBL:F6HIX7,TrEMBL:F6I0D3;Derives_from=GSCOCT00024028001;Name=Cc01_g09650;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:Putative Flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltransferase,CC_functional_completeness:complete,CC_gene:C12RT1,CC_gene:UGAT,CC_gene:UGT91B1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024028001~ Putative Flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltransferase~ C12RT1~ complete;original_location=complement(1301445..1302797);owner=coffea | |
| 12430 chr1 manual_curation exon 28332560 28333912 . - . Parent=GSCOCT00024028001 | |
| 12431 chr1 manual_curation CDS 28332560 28333912 . - 0 Parent=GSCOCT00024028001 | |
| 12432 chr1 manual_curation gene 28335207 28336854 . + . ID=GSCOCG00024029001;Name=Cc01_g09660 | |
| 12433 chr1 manual_curation mRNA 28335207 28336854 . + . ID=GSCOCT00024029001;Parent=GSCOCG00024029001;Name=Cc01_g09660 | |
| 12434 chr1 manual_curation polypeptide 28335345 28336854 . + . ID=GSCOCP00024029001;Derives_from=GSCOCT00024029001;Name=Cc01_g09660;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024029001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(1304230..1304260%2C1305681..1305739);owner=coffea | |
| 12435 chr1 manual_curation exon 28335207 28335375 . + . Parent=GSCOCT00024029001 | |
| 12436 chr1 manual_curation exon 28336796 28336854 . + . Parent=GSCOCT00024029001 | |
| 12437 chr1 manual_curation CDS 28335345 28335375 . + 0 Parent=GSCOCT00024029001 | |
| 12438 chr1 manual_curation CDS 28336796 28336854 . + 1 Parent=GSCOCT00024029001 | |
| 12439 chr1 manual_curation gene 28339817 28344719 . + . ID=GSCOCG00024031001;Name=Cc01_g09670 | |
| 12440 chr1 manual_curation mRNA 28339817 28344719 . + . ID=GSCOCT00024031001;Parent=GSCOCG00024031001;Name=Cc01_g09670 | |
| 12441 chr1 manual_curation polypeptide 28339817 28344279 . + . ID=GSCOCP00024031001;Dbxref=HAMAP:MF_00185,InterPro:IPR002627,InterPro:IPR018022,PANTHER:PTHR11088,PFAM:PF01715,SwissProt:Q80UN9,SwissProt:Q9H3H1,SwissProt:Q9ZUX7,TAIR:AT1G68460.1,TAIR:AT2G27760.1,TAIR:AT5G19040.1,TIGRFAMs:TIGR00174,TrEMBL:B9SSW5,TrEMBL:D7SN44,TrEMBL:I1LKV0;Derives_from=GSCOCT00024031001;Name=Cc01_g09670;Ontology_term=CC_evidence_code:ISS,GO:0004811,GO:0005524,GO:0008033,CC_EC_number:2.5.1.8,PRODUCT:tRNA dimethylallyltransferase 2,CC_functional_completeness:complete,CC_gene:IPT2,CC_gene:Trit1,CC_gene:TRIT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024031001~ tRNA dimethylallyltransferase 2~ IPT2~ complete;original_location=join(1308702..1308902%2C1309025..1309079%2C1309189..1309268%2C1310421..1310489%2C1310755..1310827%2C1310926..1311032%2C1311235..1311309%2C1311654..1312055%2C1312610..1312685%2C1312778..1312935%2C1313045..1313164);owner=coffea | |
| 12442 chr1 manual_curation exon 28339817 28340017 . + . Parent=GSCOCT00024031001 | |
| 12443 chr1 manual_curation exon 28340140 28340194 . + . Parent=GSCOCT00024031001 | |
| 12444 chr1 manual_curation exon 28340304 28340383 . + . Parent=GSCOCT00024031001 | |
| 12445 chr1 manual_curation exon 28341536 28341604 . + . Parent=GSCOCT00024031001 | |
| 12446 chr1 manual_curation exon 28341870 28341942 . + . Parent=GSCOCT00024031001 | |
| 12447 chr1 manual_curation exon 28342041 28342147 . + . Parent=GSCOCT00024031001 | |
| 12448 chr1 manual_curation exon 28342350 28342424 . + . Parent=GSCOCT00024031001 | |
| 12449 chr1 manual_curation exon 28342769 28343170 . + . Parent=GSCOCT00024031001 | |
| 12450 chr1 manual_curation exon 28343725 28343800 . + . Parent=GSCOCT00024031001 | |
| 12451 chr1 manual_curation exon 28343893 28344050 . + . Parent=GSCOCT00024031001 | |
| 12452 chr1 manual_curation exon 28344160 28344719 . + . Parent=GSCOCT00024031001 | |
| 12453 chr1 manual_curation CDS 28339817 28340017 . + 0 Parent=GSCOCT00024031001 | |
| 12454 chr1 manual_curation CDS 28340140 28340194 . + 0 Parent=GSCOCT00024031001 | |
| 12455 chr1 manual_curation CDS 28340304 28340383 . + 1 Parent=GSCOCT00024031001 | |
| 12456 chr1 manual_curation CDS 28341536 28341604 . + 0 Parent=GSCOCT00024031001 | |
| 12457 chr1 manual_curation CDS 28341870 28341942 . + 0 Parent=GSCOCT00024031001 | |
| 12458 chr1 manual_curation CDS 28342041 28342147 . + 1 Parent=GSCOCT00024031001 | |
| 12459 chr1 manual_curation CDS 28342350 28342424 . + 0 Parent=GSCOCT00024031001 | |
| 12460 chr1 manual_curation CDS 28342769 28343170 . + 0 Parent=GSCOCT00024031001 | |
| 12461 chr1 manual_curation CDS 28343725 28343800 . + 0 Parent=GSCOCT00024031001 | |
| 12462 chr1 manual_curation CDS 28343893 28344050 . + 1 Parent=GSCOCT00024031001 | |
| 12463 chr1 manual_curation CDS 28344160 28344279 . + 0 Parent=GSCOCT00024031001 | |
| 12464 chr1 manual_curation gene 28353454 28354491 . - . ID=GSCOCG00024032001;Name=Cc01_g09680 | |
| 12465 chr1 manual_curation mRNA 28353454 28354491 . - . ID=GSCOCT00024032001;Parent=GSCOCG00024032001;Name=Cc01_g09680 | |
| 12466 chr1 manual_curation polypeptide 28353454 28354491 . - . ID=GSCOCP00024032001;Dbxref=GENE3D:G3DSA:3.30.730.10,InterPro:IPR001471,InterPro:IPR016177,PFAM:PF00847,PRINTS:PR00367,PROFILE:PS51032,SMART:SM00380,SUPERFAMILY:SSF54171,SwissProt:P93835,SwissProt:Q9M0L0,SwissProt:Q9SYS6,TAIR:AT4G25470.1,TAIR:AT4G25480.1,TAIR:AT4G25490.1,TrEMBL:A9PL47,TrEMBL:B9HQU5,TrEMBL:F6GW42;Derives_from=GSCOCT00024032001;Name=Cc01_g09680;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,CC_EC_number:missing_EC_number,PRODUCT:Dehydration-responsive element-binding protein 1C,CC_functional_completeness:modules,CC_gene:DREB1C,CC_gene:DREB1A,CC_gene:DREB1B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024032001~ Dehydration-responsive element-binding protein 1C~ DREB1C~ modules;original_location=complement(join(1322653..1323376%2C1322339..1322517));owner=coffea | |
| 12467 chr1 manual_curation exon 28353454 28353632 . - . Parent=GSCOCT00024032001 | |
| 12468 chr1 manual_curation exon 28353768 28354491 . - . Parent=GSCOCT00024032001 | |
| 12469 chr1 manual_curation CDS 28353454 28353632 . - 1 Parent=GSCOCT00024032001 | |
| 12470 chr1 manual_curation CDS 28353768 28354491 . - 0 Parent=GSCOCT00024032001 | |
| 12471 chr1 manual_curation gene 28365237 28366002 . - . ID=GSCOCG00024033001;Name=Cc01_g09690 | |
| 12472 chr1 manual_curation mRNA 28365237 28366002 . - . ID=GSCOCT00024033001;Parent=GSCOCG00024033001;Name=Cc01_g09690 | |
| 12473 chr1 manual_curation polypeptide 28365237 28366002 . - . ID=GSCOCP00024033001;Dbxref=TAIR:AT3G19895.1,TrEMBL:B9HI63,TrEMBL:B9RPY5,TrEMBL:F6HGH8;Derives_from=GSCOCT00024033001;Name=Cc01_g09690;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:RING/U-box superfamily protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024033001~ RING/U-box superfamily protein~ unknown_gene~ fragment;original_location=complement(join(1334722..1334887%2C1334301..1334487%2C1334122..1334209));owner=coffea | |
| 12474 chr1 manual_curation exon 28365237 28365324 . - . Parent=GSCOCT00024033001 | |
| 12475 chr1 manual_curation exon 28365416 28365602 . - . Parent=GSCOCT00024033001 | |
| 12476 chr1 manual_curation exon 28365837 28366002 . - . Parent=GSCOCT00024033001 | |
| 12477 chr1 manual_curation CDS 28365237 28365324 . - 2 Parent=GSCOCT00024033001 | |
| 12478 chr1 manual_curation CDS 28365416 28365602 . - 1 Parent=GSCOCT00024033001 | |
| 12479 chr1 manual_curation CDS 28365837 28366002 . - 0 Parent=GSCOCT00024033001 | |
| 12480 chr1 manual_curation gene 28366192 28366494 . - . ID=GSCOCG00024034001;Name=Cc01_g09700 | |
| 12481 chr1 manual_curation mRNA 28366192 28366494 . - . ID=GSCOCT00024034001;Parent=GSCOCG00024034001;Name=Cc01_g09700 | |
| 12482 chr1 manual_curation polypeptide 28366192 28366494 . - . ID=GSCOCP00024034001;Dbxref=GENE3D:G3DSA:3.90.930.12,InterPro:IPR000702,InterPro:IPR002359,InterPro:IPR020040,PANTHER:PTHR11655,PFAM:PF00347,PROSITE:PS00700,SUPERFAMILY:SSF56053,SwissProt:P30707,SwissProt:P49209,TAIR:AT1G33120.1,TAIR:AT1G33140.1,TAIR:AT4G10450.1;Derives_from=GSCOCT00024034001;Name=Cc01_g09700;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,GO:0019843,CC_EC_number:missing_EC_number,PRODUCT:60S ribosomal protein L9-1,CC_functional_completeness:fragment,CC_gene:RPL9,CC_gene:RPL9B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024034001~ 60S ribosomal protein L9-1~ RPL9~ fragment;original_location=complement(join(1335272..1335379%2C1335077..1335145));owner=coffea | |
| 12483 chr1 manual_curation exon 28366192 28366260 . - . Parent=GSCOCT00024034001 | |
| 12484 chr1 manual_curation exon 28366387 28366494 . - . Parent=GSCOCT00024034001 | |
| 12485 chr1 manual_curation CDS 28366192 28366260 . - 0 Parent=GSCOCT00024034001 | |
| 12486 chr1 manual_curation CDS 28366387 28366494 . - 0 Parent=GSCOCT00024034001 | |
| 12487 chr1 manual_curation gene 28367105 28367978 . - . ID=GSCOCG00024035001;Name=Cc01_g09710 | |
| 12488 chr1 manual_curation mRNA 28367105 28367978 . - . ID=GSCOCT00024035001;Parent=GSCOCG00024035001;Name=Cc01_g09710 | |
| 12489 chr1 manual_curation polypeptide 28367105 28367978 . - . ID=GSCOCP00024035001;Dbxref=TrEMBL:A5C9V3;Derives_from=GSCOCT00024035001;Name=Cc01_g09710;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024035001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1336762..1336863%2C1335990..1336067));owner=coffea | |
| 12490 chr1 manual_curation exon 28367105 28367182 . - . Parent=GSCOCT00024035001 | |
| 12491 chr1 manual_curation exon 28367877 28367978 . - . Parent=GSCOCT00024035001 | |
| 12492 chr1 manual_curation CDS 28367105 28367182 . - 0 Parent=GSCOCT00024035001 | |
| 12493 chr1 manual_curation CDS 28367877 28367978 . - 0 Parent=GSCOCT00024035001 | |
| 12494 chr1 manual_curation gene 28368122 28368262 . - . ID=GSCOCG00024036001;Name=Cc01_g09720 | |
| 12495 chr1 manual_curation mRNA 28368122 28368262 . - . ID=GSCOCT00024036001;Parent=GSCOCG00024036001;Name=Cc01_g09720 | |
| 12496 chr1 manual_curation polypeptide 28368122 28368262 . - . ID=GSCOCP00024036001;Derives_from=GSCOCT00024036001;Name=Cc01_g09720;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024036001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(1337007..1337147);owner=coffea | |
| 12497 chr1 manual_curation exon 28368122 28368262 . - . Parent=GSCOCT00024036001 | |
| 12498 chr1 manual_curation CDS 28368122 28368262 . - 0 Parent=GSCOCT00024036001 | |
| 12499 chr1 manual_curation gene 28373982 28375012 . + . ID=GSCOCG00024037001;Name=Cc01_g09730 | |
| 12500 chr1 manual_curation mRNA 28373982 28375012 . + . ID=GSCOCT00024037001;Parent=GSCOCG00024037001;Name=Cc01_g09730 | |
| 12501 chr1 manual_curation polypeptide 28374218 28374717 . + . ID=GSCOCP00024037001;Dbxref=InterPro:IPR011008,InterPro:IPR013097,PFAM:PF07876,SMART:SM00886,SUPERFAMILY:SSF54909,SwissProt:Q9FK81,SwissProt:Q9LUV2,TAIR:AT3G17210.1,TAIR:AT5G22580.1,TrEMBL:A5C6X0,TrEMBL:C6T019,TrEMBL:Q58A16;Derives_from=GSCOCT00024037001;Name=Cc01_g09730;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterized protein At5g22580,CC_functional_completeness:complete,CC_gene:At5g22580,CC_gene:At3g17210;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024037001~ Uncharacterized protein At5g22580~ At5g22580~ complete;original_location=join(1343103..1343221%2C1343404..1343602);owner=coffea | |
| 12502 chr1 manual_curation exon 28373982 28374336 . + . Parent=GSCOCT00024037001 | |
| 12503 chr1 manual_curation exon 28374519 28375012 . + . Parent=GSCOCT00024037001 | |
| 12504 chr1 manual_curation CDS 28374218 28374336 . + 0 Parent=GSCOCT00024037001 | |
| 12505 chr1 manual_curation CDS 28374519 28374717 . + 2 Parent=GSCOCT00024037001 | |
| 12506 chr1 manual_curation gene 28375783 28377918 . + . ID=GSCOCG00024038001;Name=Cc01_g09740 | |
| 12507 chr1 manual_curation mRNA 28375783 28377918 . + . ID=GSCOCT00024038001;Parent=GSCOCG00024038001;Name=Cc01_g09740 | |
| 12508 chr1 manual_curation polypeptide 28375953 28376869 . + . ID=GSCOCP00024038001;Dbxref=TrEMBL:B9HQU1,TrEMBL:B9T5T7,TrEMBL:F6GW45;Derives_from=GSCOCT00024038001;Name=Cc01_g09740;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024038001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=join(1344838..1345555%2C1345651..1345754);owner=coffea | |
| 12509 chr1 manual_curation exon 28377470 28377529 . + . Parent=GSCOCT00024038001 | |
| 12510 chr1 manual_curation exon 28377823 28377918 . + . Parent=GSCOCT00024038001 | |
| 12511 chr1 manual_curation exon 28375783 28376670 . + . Parent=GSCOCT00024038001 | |
| 12512 chr1 manual_curation exon 28376766 28376870 . + . Parent=GSCOCT00024038001 | |
| 12513 chr1 manual_curation CDS 28375953 28376670 . + 0 Parent=GSCOCT00024038001 | |
| 12514 chr1 manual_curation CDS 28376766 28376869 . + 1 Parent=GSCOCT00024038001 | |
| 12515 chr1 manual_curation gene 28384346 28385248 . - . ID=GSCOCG00024041001;Name=Cc01_g09750 | |
| 12516 chr1 manual_curation mRNA 28384346 28385248 . - . ID=GSCOCT00024041001;Parent=GSCOCG00024041001;Name=Cc01_g09750 | |
| 12517 chr1 manual_curation polypeptide 28384346 28385248 . - . ID=GSCOCP00024041001;Dbxref=InterPro:IPR008586,PFAM:PF05910,TAIR:AT2G27770.1,TAIR:AT3G04860.1,TAIR:AT5G28150.1,TrEMBL:B9MYJ2,TrEMBL:B9T5T5,TrEMBL:F6GW46;Derives_from=GSCOCT00024041001;Name=Cc01_g09750;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Plant protein of unknown function (DUF868),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024041001~ Plant protein of unknown function (DUF868)~ unknown_gene~ complete;original_location=complement(1353231..1354133);owner=coffea | |
| 12518 chr1 manual_curation exon 28384346 28385248 . - . Parent=GSCOCT00024041001 | |
| 12519 chr1 manual_curation CDS 28384346 28385248 . - 0 Parent=GSCOCT00024041001 | |
| 12520 chr1 manual_curation gene 28393156 28398390 . - . ID=GSCOCG00024042001;Name=Cc01_g09760 | |
| 12521 chr1 manual_curation mRNA 28393156 28398390 . - . ID=GSCOCT00024042001;Parent=GSCOCG00024042001;Name=Cc01_g09760 | |
| 12522 chr1 manual_curation polypeptide 28393437 28397925 . - . ID=GSCOCP00024042001;Dbxref=InterPro:IPR013078,PFAM:PF00300,TAIR:AT5G22620.1,TrEMBL:B9MYJ3,TrEMBL:B9T5T3,TrEMBL:H2A0J7;Derives_from=GSCOCT00024042001;Name=Cc01_g09760;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:phosphoglycerate/bisphosphoglycerate mutase family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024042001~ phosphoglycerate/bisphosphoglycerate mutase family protein~ unknown_gene~ complete;original_location=complement(join(1366773..1366810%2C1365738..1365843%2C1365319..1365535%2C1365089..1365207%2C1364649..1364747%2C1363569..1363622%2C1363385..1363483%2C1363199..1363306%2C1362322..1362696));owner=coffea | |
| 12523 chr1 manual_curation exon 28393156 28393811 . - . Parent=GSCOCT00024042001 | |
| 12524 chr1 manual_curation exon 28394314 28394421 . - . Parent=GSCOCT00024042001 | |
| 12525 chr1 manual_curation exon 28394500 28394598 . - . Parent=GSCOCT00024042001 | |
| 12526 chr1 manual_curation exon 28394684 28394737 . - . Parent=GSCOCT00024042001 | |
| 12527 chr1 manual_curation exon 28395764 28395862 . - . Parent=GSCOCT00024042001 | |
| 12528 chr1 manual_curation exon 28396204 28396322 . - . Parent=GSCOCT00024042001 | |
| 12529 chr1 manual_curation exon 28396434 28396650 . - . Parent=GSCOCT00024042001 | |
| 12530 chr1 manual_curation exon 28396853 28396958 . - . Parent=GSCOCT00024042001 | |
| 12531 chr1 manual_curation exon 28397888 28398390 . - . Parent=GSCOCT00024042001 | |
| 12532 chr1 manual_curation CDS 28393437 28393811 . - 0 Parent=GSCOCT00024042001 | |
| 12533 chr1 manual_curation CDS 28394314 28394421 . - 0 Parent=GSCOCT00024042001 | |
| 12534 chr1 manual_curation CDS 28394500 28394598 . - 0 Parent=GSCOCT00024042001 | |
| 12535 chr1 manual_curation CDS 28394684 28394737 . - 0 Parent=GSCOCT00024042001 | |
| 12536 chr1 manual_curation CDS 28395764 28395862 . - 0 Parent=GSCOCT00024042001 | |
| 12537 chr1 manual_curation CDS 28396204 28396322 . - 1 Parent=GSCOCT00024042001 | |
| 12538 chr1 manual_curation CDS 28396434 28396650 . - 0 Parent=GSCOCT00024042001 | |
| 12539 chr1 manual_curation CDS 28396853 28396958 . - 2 Parent=GSCOCT00024042001 | |
| 12540 chr1 manual_curation CDS 28397888 28397925 . - 0 Parent=GSCOCT00024042001 | |
| 12541 chr1 manual_curation gene 28408767 28416473 . + . ID=GSCOCG00024043001;Name=Cc01_g09770 | |
| 12542 chr1 manual_curation mRNA 28408767 28416473 . + . ID=GSCOCT00024043001;Parent=GSCOCG00024043001;Name=Cc01_g09770 | |
| 12543 chr1 manual_curation polypeptide 28408767 28416072 . + . ID=GSCOCP00024043001;Dbxref=InterPro:IPR006043,PANTHER:PTHR11119,PFAM:PF00860,SwissProt:Q3E7D0,SwissProt:Q6SZ87,SwissProt:Q9SHZ3,TAIR:AT2G05760.1,TAIR:AT2G27810.1,TAIR:AT4G38050.1,TrEMBL:B9HQT7,TrEMBL:I1LTS1,TrEMBL:I1MS61;Derives_from=GSCOCT00024043001;Name=Cc01_g09770;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006810,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Nucleobase-ascorbate transporter 12,CC_functional_completeness:complete,CC_gene:NAT12,CC_gene:NAT11,CC_gene:NAT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024043001~ Nucleobase-ascorbate transporter 12~ NAT12~ complete;original_location=join(1377652..1377671%2C1378623..1378801%2C1379362..1379459%2C1379567..1379737%2C1380576..1380676%2C1381428..1381563%2C1381708..1381758%2C1381856..1382143%2C1383317..1383551%2C1384316..1384602%2C1384736..1384957);owner=coffea | |
| 12544 chr1 manual_curation exon 28408767 28408786 . + . Parent=GSCOCT00024043001 | |
| 12545 chr1 manual_curation exon 28409738 28409916 . + . Parent=GSCOCT00024043001 | |
| 12546 chr1 manual_curation exon 28410477 28410574 . + . Parent=GSCOCT00024043001 | |
| 12547 chr1 manual_curation exon 28410682 28410852 . + . Parent=GSCOCT00024043001 | |
| 12548 chr1 manual_curation exon 28411691 28411791 . + . Parent=GSCOCT00024043001 | |
| 12549 chr1 manual_curation exon 28412543 28412678 . + . Parent=GSCOCT00024043001 | |
| 12550 chr1 manual_curation exon 28412823 28412873 . + . Parent=GSCOCT00024043001 | |
| 12551 chr1 manual_curation exon 28412971 28413258 . + . Parent=GSCOCT00024043001 | |
| 12552 chr1 manual_curation exon 28414432 28414666 . + . Parent=GSCOCT00024043001 | |
| 12553 chr1 manual_curation exon 28415431 28415717 . + . Parent=GSCOCT00024043001 | |
| 12554 chr1 manual_curation exon 28415851 28416473 . + . Parent=GSCOCT00024043001 | |
| 12555 chr1 manual_curation CDS 28408767 28408786 . + 0 Parent=GSCOCT00024043001 | |
| 12556 chr1 manual_curation CDS 28409738 28409916 . + 2 Parent=GSCOCT00024043001 | |
| 12557 chr1 manual_curation CDS 28410477 28410574 . + 1 Parent=GSCOCT00024043001 | |
| 12558 chr1 manual_curation CDS 28410682 28410852 . + 0 Parent=GSCOCT00024043001 | |
| 12559 chr1 manual_curation CDS 28411691 28411791 . + 0 Parent=GSCOCT00024043001 | |
| 12560 chr1 manual_curation CDS 28412543 28412678 . + 2 Parent=GSCOCT00024043001 | |
| 12561 chr1 manual_curation CDS 28412823 28412873 . + 0 Parent=GSCOCT00024043001 | |
| 12562 chr1 manual_curation CDS 28412971 28413258 . + 0 Parent=GSCOCT00024043001 | |
| 12563 chr1 manual_curation CDS 28414432 28414666 . + 0 Parent=GSCOCT00024043001 | |
| 12564 chr1 manual_curation CDS 28415431 28415717 . + 1 Parent=GSCOCT00024043001 | |
| 12565 chr1 manual_curation CDS 28415851 28416072 . + 0 Parent=GSCOCT00024043001 | |
| 12566 chr1 manual_curation gene 28434204 28436329 . + . ID=GSCOCG00024045001;Name=Cc01_g09780 | |
| 12567 chr1 manual_curation mRNA 28434204 28436329 . + . ID=GSCOCT00024045001;Parent=GSCOCG00024045001;Name=Cc01_g09780 | |
| 12568 chr1 manual_curation polypeptide 28434444 28435784 . + . ID=GSCOCP00024045001;Dbxref=InterPro:IPR001086,InterPro:IPR018528,PFAM:PF00800,PROFILE:PS51171,PROSITE:PS00857,PROSITE:PS00858,SwissProt:O22241,SwissProt:Q9SGD6,SwissProt:Q9ZUY3,TAIR:AT1G08250.1,TAIR:AT2G27820.1,TAIR:AT3G44720.1,TrEMBL:A5BWG3,TrEMBL:D3U717,TrEMBL:Q6JJ29;Derives_from=GSCOCT00024045001;Name=Cc01_g09780;Ontology_term=CC_evidence_code:ISS,GO:0004664,GO:0009094,CC_EC_number:4.2.1.51,PRODUCT:Arogenate dehydratase/prephenate dehydratase 6%2C chloroplastic,CC_functional_completeness:complete,CC_gene:ADT6,CC_gene:ADT3,CC_gene:ADT4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024045001~ Arogenate dehydratase/prephenate dehydratase 6%2C chloroplastic~ ADT6~ complete;original_location=1403329..1404669;owner=coffea | |
| 12569 chr1 manual_curation exon 28434204 28436329 . + . Parent=GSCOCT00024045001 | |
| 12570 chr1 manual_curation CDS 28434444 28435784 . + 0 Parent=GSCOCT00024045001 | |
| 12571 chr1 manual_curation gene 28452064 28453066 . + . ID=GSCOCG00024046001;Name=Cc01_g09790 | |
| 12572 chr1 manual_curation mRNA 28452064 28453066 . + . ID=GSCOCT00024046001;Parent=GSCOCG00024046001;Name=Cc01_g09790 | |
| 12573 chr1 manual_curation polypeptide 28452242 28452744 . + . ID=GSCOCP00024046001;Dbxref=InterPro:IPR009438,PFAM:PF06404,SwissProt:Q8LA14,TAIR:AT3G44735.1,TrEMBL:A5AFV9,TrEMBL:A9P9C4,TrEMBL:D7SN54;Derives_from=GSCOCT00024046001;Name=Cc01_g09790;Ontology_term=CC_evidence_code:ISS,GO:0005576,GO:0008083,GO:0008283,CC_EC_number:missing_EC_number,PRODUCT:Putative phytosulfokines 6,CC_functional_completeness:complete,CC_gene:PSK6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024046001~ Putative phytosulfokines 6~ PSK6~ complete;original_location=join(1421127..1421226%2C1421343..1421422%2C1421516..1421629);owner=coffea | |
| 12574 chr1 manual_curation exon 28452064 28452341 . + . Parent=GSCOCT00024046001 | |
| 12575 chr1 manual_curation exon 28452458 28452537 . + . Parent=GSCOCT00024046001 | |
| 12576 chr1 manual_curation exon 28452631 28453066 . + . Parent=GSCOCT00024046001 | |
| 12577 chr1 manual_curation CDS 28452242 28452341 . + 0 Parent=GSCOCT00024046001 | |
| 12578 chr1 manual_curation CDS 28452458 28452537 . + 1 Parent=GSCOCT00024046001 | |
| 12579 chr1 manual_curation CDS 28452631 28452744 . + 0 Parent=GSCOCT00024046001 | |
| 12580 chr1 manual_curation gene 28453730 28455739 . - . ID=GSCOCG00024047001;Name=Cc01_g09800 | |
| 12581 chr1 manual_curation mRNA 28453730 28455739 . - . ID=GSCOCT00024047001;Parent=GSCOCG00024047001;Name=Cc01_g09800 | |
| 12582 chr1 manual_curation polypeptide 28454696 28455085 . - . ID=GSCOCP00024047001;Derives_from=GSCOCT00024047001;Name=Cc01_g09800;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024047001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(1423581..1423970);owner=coffea | |
| 12583 chr1 manual_curation exon 28453730 28455739 . - . Parent=GSCOCT00024047001 | |
| 12584 chr1 manual_curation CDS 28454696 28455085 . - 0 Parent=GSCOCT00024047001 | |
| 12585 chr1 manual_curation gene 28479844 28485015 . + . ID=GSCOCG00024050001;Name=Cc01_g09810 | |
| 12586 chr1 manual_curation mRNA 28479844 28485015 . + . ID=GSCOCT00024050001;Parent=GSCOCG00024050001;Name=Cc01_g09810 | |
| 12587 chr1 manual_curation polypeptide 28479997 28484706 . + . ID=GSCOCP00024050001;Dbxref=InterPro:IPR021825,PFAM:PF11891,TAIR:AT2G37860.3,TAIR:AT5G22790.1,TrEMBL:F6HL27,TrEMBL:I1KK44,TrEMBL:I1N2N4;Derives_from=GSCOCT00024050001;Name=Cc01_g09810;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of unknown function DUF3411,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024050001~ Putative Protein of unknown function DUF3411~ unknown_gene~ complete;original_location=join(1448882..1449892%2C1450031..1450135%2C1450859..1451076%2C1452131..1452200%2C1452425..1452504%2C1453074..1453138%2C1453386..1453591);owner=coffea | |
| 12588 chr1 manual_curation exon 28479844 28481007 . + . Parent=GSCOCT00024050001 | |
| 12589 chr1 manual_curation exon 28481146 28481250 . + . Parent=GSCOCT00024050001 | |
| 12590 chr1 manual_curation exon 28481974 28482191 . + . Parent=GSCOCT00024050001 | |
| 12591 chr1 manual_curation exon 28483246 28483315 . + . Parent=GSCOCT00024050001 | |
| 12592 chr1 manual_curation exon 28483540 28483619 . + . Parent=GSCOCT00024050001 | |
| 12593 chr1 manual_curation exon 28484189 28484253 . + . Parent=GSCOCT00024050001 | |
| 12594 chr1 manual_curation exon 28484501 28485015 . + . Parent=GSCOCT00024050001 | |
| 12595 chr1 manual_curation CDS 28479997 28481007 . + 0 Parent=GSCOCT00024050001 | |
| 12596 chr1 manual_curation CDS 28481146 28481250 . + 0 Parent=GSCOCT00024050001 | |
| 12597 chr1 manual_curation CDS 28481974 28482191 . + 0 Parent=GSCOCT00024050001 | |
| 12598 chr1 manual_curation CDS 28483246 28483315 . + 2 Parent=GSCOCT00024050001 | |
| 12599 chr1 manual_curation CDS 28483540 28483619 . + 0 Parent=GSCOCT00024050001 | |
| 12600 chr1 manual_curation CDS 28484189 28484253 . + 2 Parent=GSCOCT00024050001 | |
| 12601 chr1 manual_curation CDS 28484501 28484706 . + 1 Parent=GSCOCT00024050001 | |
| 12602 chr1 manual_curation gene 28487217 28491133 . + . ID=GSCOCG00024051001;Name=Cc01_g09820 | |
| 12603 chr1 manual_curation mRNA 28487217 28491133 . + . ID=GSCOCT00024051001;Parent=GSCOCG00024051001;Name=Cc01_g09820 | |
| 12604 chr1 manual_curation polypeptide 28487440 28490919 . + . ID=GSCOCP00024051001;Dbxref=InterPro:IPR021825,PFAM:PF11891,TAIR:AT2G37860.3,TAIR:AT5G22790.1,TrEMBL:F6HL27,TrEMBL:I1KK44,TrEMBL:I1N2N4;Derives_from=GSCOCT00024051001;Name=Cc01_g09820;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:reticulata-related 1,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024051001~ reticulata-related 1~ unknown_gene~ fragment;original_location=join(1456325..1456393%2C1456900..1457117%2C1458200..1458269%2C1458535..1458614%2C1459140..1459204%2C1459599..1459804);owner=coffea | |
| 12605 chr1 manual_curation exon 28487217 28487508 . + . Parent=GSCOCT00024051001 | |
| 12606 chr1 manual_curation exon 28488015 28488232 . + . Parent=GSCOCT00024051001 | |
| 12607 chr1 manual_curation exon 28489315 28489384 . + . Parent=GSCOCT00024051001 | |
| 12608 chr1 manual_curation exon 28489650 28489729 . + . Parent=GSCOCT00024051001 | |
| 12609 chr1 manual_curation exon 28490255 28490319 . + . Parent=GSCOCT00024051001 | |
| 12610 chr1 manual_curation exon 28490714 28491133 . + . Parent=GSCOCT00024051001 | |
| 12611 chr1 manual_curation CDS 28487440 28487508 . + 0 Parent=GSCOCT00024051001 | |
| 12612 chr1 manual_curation CDS 28488015 28488232 . + 0 Parent=GSCOCT00024051001 | |
| 12613 chr1 manual_curation CDS 28489315 28489384 . + 2 Parent=GSCOCT00024051001 | |
| 12614 chr1 manual_curation CDS 28489650 28489729 . + 0 Parent=GSCOCT00024051001 | |
| 12615 chr1 manual_curation CDS 28490255 28490319 . + 2 Parent=GSCOCT00024051001 | |
| 12616 chr1 manual_curation CDS 28490714 28490919 . + 1 Parent=GSCOCT00024051001 | |
| 12617 chr1 manual_curation gene 28494607 28501304 . + . ID=GSCOCG00024052001;Name=Cc01_g09830 | |
| 12618 chr1 manual_curation mRNA 28494607 28501304 . + . ID=GSCOCT00024052001;Parent=GSCOCG00024052001;Name=Cc01_g09830 | |
| 12619 chr1 manual_curation polypeptide 28494607 28501304 . + . ID=GSCOCP00024052001;Dbxref=InterPro:IPR003409,PFAM:PF02493,SMART:SM00698,TAIR:AT5G22640.1,TrEMBL:B9HQL7,TrEMBL:B9SN83,TrEMBL:D7SN57;Derives_from=GSCOCT00024052001;Name=Cc01_g09830;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024052001~ MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein~ unknown_gene~ complete;original_location=join(1463492..1464117%2C1465306..1465377%2C1465504..1465593%2C1465712..1465885%2C1466073..1466163%2C1466529..1466591%2C1466676..1466742%2C1467118..1467221%2C1467304..1467430%2C1468676..1469418%2C1469872..1470189);owner=coffea | |
| 12620 chr1 manual_curation exon 28494607 28495232 . + . Parent=GSCOCT00024052001 | |
| 12621 chr1 manual_curation exon 28496421 28496492 . + . Parent=GSCOCT00024052001 | |
| 12622 chr1 manual_curation exon 28496619 28496708 . + . Parent=GSCOCT00024052001 | |
| 12623 chr1 manual_curation exon 28496827 28497000 . + . Parent=GSCOCT00024052001 | |
| 12624 chr1 manual_curation exon 28497188 28497278 . + . Parent=GSCOCT00024052001 | |
| 12625 chr1 manual_curation exon 28497644 28497706 . + . Parent=GSCOCT00024052001 | |
| 12626 chr1 manual_curation exon 28497791 28497857 . + . Parent=GSCOCT00024052001 | |
| 12627 chr1 manual_curation exon 28498233 28498336 . + . Parent=GSCOCT00024052001 | |
| 12628 chr1 manual_curation exon 28498419 28498545 . + . Parent=GSCOCT00024052001 | |
| 12629 chr1 manual_curation exon 28499791 28500533 . + . Parent=GSCOCT00024052001 | |
| 12630 chr1 manual_curation exon 28500987 28501304 . + . Parent=GSCOCT00024052001 | |
| 12631 chr1 manual_curation CDS 28494607 28495232 . + 0 Parent=GSCOCT00024052001 | |
| 12632 chr1 manual_curation CDS 28496421 28496492 . + 2 Parent=GSCOCT00024052001 | |
| 12633 chr1 manual_curation CDS 28496619 28496708 . + 2 Parent=GSCOCT00024052001 | |
| 12634 chr1 manual_curation CDS 28496827 28497000 . + 2 Parent=GSCOCT00024052001 | |
| 12635 chr1 manual_curation CDS 28497188 28497278 . + 2 Parent=GSCOCT00024052001 | |
| 12636 chr1 manual_curation CDS 28497644 28497706 . + 0 Parent=GSCOCT00024052001 | |
| 12637 chr1 manual_curation CDS 28497791 28497857 . + 0 Parent=GSCOCT00024052001 | |
| 12638 chr1 manual_curation CDS 28498233 28498336 . + 1 Parent=GSCOCT00024052001 | |
| 12639 chr1 manual_curation CDS 28498419 28498545 . + 0 Parent=GSCOCT00024052001 | |
| 12640 chr1 manual_curation CDS 28499791 28500533 . + 1 Parent=GSCOCT00024052001 | |
| 12641 chr1 manual_curation CDS 28500987 28501304 . + 0 Parent=GSCOCT00024052001 | |
| 12642 chr1 manual_curation gene 28515213 28516505 . + . ID=GSCOCG00024054001;Name=Cc01_g09840 | |
| 12643 chr1 manual_curation mRNA 28515213 28516505 . + . ID=GSCOCT00024054001;Parent=GSCOCG00024054001;Name=Cc01_g09840 | |
| 12644 chr1 manual_curation polypeptide 28515501 28516265 . + . ID=GSCOCP00024054001;Dbxref=TAIR:AT2G27830.1,TrEMBL:C6TDI1,TrEMBL:Q2VCL4,TrEMBL:Q9FSX3;Derives_from=GSCOCT00024054001;Name=Cc01_g09840;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024054001~ unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22758.1)%3B Has 131 Blast hits to 131 proteins in 17 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 131%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(1484386..1484806%2C1484963..1485150);owner=coffea | |
| 12645 chr1 manual_curation exon 28515213 28515921 . + . Parent=GSCOCT00024054001 | |
| 12646 chr1 manual_curation exon 28516078 28516505 . + . Parent=GSCOCT00024054001 | |
| 12647 chr1 manual_curation CDS 28515501 28515921 . + 0 Parent=GSCOCT00024054001 | |
| 12648 chr1 manual_curation CDS 28516078 28516265 . + 1 Parent=GSCOCT00024054001 | |
| 12649 chr1 manual_curation gene 28520324 28521370 . + . ID=GSCOCG00024055001;Name=Cc01_g09850 | |
| 12650 chr1 manual_curation mRNA 28520324 28521370 . + . ID=GSCOCT00024055001;Parent=GSCOCG00024055001;Name=Cc01_g09850 | |
| 12651 chr1 manual_curation polypeptide 28520424 28521370 . + . ID=GSCOCP00024055001;Dbxref=SwissProt:Q6V9I6,SwissProt:Q9FVE6,SwissProt:Q9LZR5,TAIR:AT3G44750.1,TAIR:AT5G03740.1,TAIR:AT5G22650.1,TrEMBL:Q2XTD2,TrEMBL:Q307Z5,TrEMBL:Q3HVL4;Derives_from=GSCOCT00024055001;Name=Cc01_g09850;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Histone deacetylase HDT3,CC_functional_completeness:fragment,CC_gene:HDT1,CC_gene:HDT3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024055001~ Putative Histone deacetylase HDT3~ HDT1~ fragment;original_location=join(1489309..1489321%2C1489792..1489862%2C1489989..1490255);owner=coffea | |
| 12652 chr1 manual_curation exon 28520324 28520436 . + . Parent=GSCOCT00024055001 | |
| 12653 chr1 manual_curation exon 28520907 28520977 . + . Parent=GSCOCT00024055001 | |
| 12654 chr1 manual_curation exon 28521104 28521370 . + . Parent=GSCOCT00024055001 | |
| 12655 chr1 manual_curation CDS 28520424 28520436 . + 0 Parent=GSCOCT00024055001 | |
| 12656 chr1 manual_curation CDS 28520907 28520977 . + 1 Parent=GSCOCT00024055001 | |
| 12657 chr1 manual_curation CDS 28521104 28521370 . + 0 Parent=GSCOCT00024055001 | |
| 12658 chr1 manual_curation gene 28521473 28524097 . + . ID=GSCOCG00024056001;Name=Cc01_g09860 | |
| 12659 chr1 manual_curation mRNA 28521473 28524097 . + . ID=GSCOCT00024056001;Parent=GSCOCG00024056001;Name=Cc01_g09860 | |
| 12660 chr1 manual_curation polypeptide 28521473 28523645 . + . ID=GSCOCP00024056001;Derives_from=GSCOCT00024056001;Name=Cc01_g09860;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024056001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(1490358..1490415%2C1490504..1490566%2C1490700..1490845%2C1490873..1490920%2C1491523..1491570%2C1491652..1491748%2C1492324..1492387%2C1492470..1492530);owner=coffea | |
| 12661 chr1 manual_curation exon 28521473 28521530 . + . Parent=GSCOCT00024056001 | |
| 12662 chr1 manual_curation exon 28521619 28521681 . + . Parent=GSCOCT00024056001 | |
| 12663 chr1 manual_curation exon 28521815 28521960 . + . Parent=GSCOCT00024056001 | |
| 12664 chr1 manual_curation exon 28521988 28522035 . + . Parent=GSCOCT00024056001 | |
| 12665 chr1 manual_curation exon 28522638 28522685 . + . Parent=GSCOCT00024056001 | |
| 12666 chr1 manual_curation exon 28522767 28522863 . + . Parent=GSCOCT00024056001 | |
| 12667 chr1 manual_curation exon 28523439 28523502 . + . Parent=GSCOCT00024056001 | |
| 12668 chr1 manual_curation exon 28523585 28524097 . + . Parent=GSCOCT00024056001 | |
| 12669 chr1 manual_curation CDS 28521473 28521530 . + 0 Parent=GSCOCT00024056001 | |
| 12670 chr1 manual_curation CDS 28521619 28521681 . + 1 Parent=GSCOCT00024056001 | |
| 12671 chr1 manual_curation CDS 28521815 28521960 . + 1 Parent=GSCOCT00024056001 | |
| 12672 chr1 manual_curation CDS 28521988 28522035 . + 0 Parent=GSCOCT00024056001 | |
| 12673 chr1 manual_curation CDS 28522638 28522685 . + 0 Parent=GSCOCT00024056001 | |
| 12674 chr1 manual_curation CDS 28522767 28522863 . + 0 Parent=GSCOCT00024056001 | |
| 12675 chr1 manual_curation CDS 28523439 28523502 . + 1 Parent=GSCOCT00024056001 | |
| 12676 chr1 manual_curation CDS 28523585 28523645 . + 2 Parent=GSCOCT00024056001 | |
| 12677 chr1 manual_curation gene 28524643 28526295 . - . ID=GSCOCG00024057001;Name=Cc01_g09870 | |
| 12678 chr1 manual_curation mRNA 28524643 28526295 . - . ID=GSCOCT00024057001;Parent=GSCOCG00024057001;Name=Cc01_g09870 | |
| 12679 chr1 manual_curation polypeptide 28524741 28526255 . - . ID=GSCOCP00024057001;Dbxref=InterPro:IPR005123,PFAM:PF03171,SwissProt:P24397,SwissProt:Q40061,SwissProt:Q40062,TAIR:AT4G10490.1,TAIR:AT4G10500.1,TAIR:AT5G24530.1,TrEMBL:B9T297,TrEMBL:D7U2Y4,TrEMBL:Q8LKP6;Derives_from=GSCOCT00024057001;Name=Cc01_g09870;Ontology_term=CC_evidence_code:ISS,GO:0016491,CC_EC_number:1.14.11.11,PRODUCT:Putative Hyoscyamine 6-dioxygenase,CC_functional_completeness:complete,CC_gene:H6H,CC_gene:IDS3,CC_gene:IDS2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024057001~ Putative Hyoscyamine 6-dioxygenase~ H6H~ complete;original_location=complement(join(1494937..1495140%2C1494570..1494832%2C1494005..1494323%2C1493626..1493874));owner=coffea | |
| 12680 chr1 manual_curation exon 28524643 28524989 . - . Parent=GSCOCT00024057001 | |
| 12681 chr1 manual_curation exon 28525120 28525438 . - . Parent=GSCOCT00024057001 | |
| 12682 chr1 manual_curation exon 28525685 28525947 . - . Parent=GSCOCT00024057001 | |
| 12683 chr1 manual_curation exon 28526052 28526295 . - . Parent=GSCOCT00024057001 | |
| 12684 chr1 manual_curation CDS 28524741 28524989 . - 0 Parent=GSCOCT00024057001 | |
| 12685 chr1 manual_curation CDS 28525120 28525438 . - 2 Parent=GSCOCT00024057001 | |
| 12686 chr1 manual_curation CDS 28525685 28525947 . - 0 Parent=GSCOCT00024057001 | |
| 12687 chr1 manual_curation CDS 28526052 28526255 . - 0 Parent=GSCOCT00024057001 | |
| 12688 chr1 manual_curation gene 28527568 28531510 . - . ID=GSCOCG00024058001;Name=Cc01_g09880 | |
| 12689 chr1 manual_curation mRNA 28527568 28531510 . - . ID=GSCOCT00024058001;Parent=GSCOCG00024058001;Name=Cc01_g09880 | |
| 12690 chr1 manual_curation polypeptide 28528917 28531344 . - . ID=GSCOCP00024058001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR000571,InterPro:IPR003954,InterPro:IPR009145,InterPro:IPR012677,PANTHER:PTHR12620,PFAM:PF00076,PFAM:PF00642,PRINTS:PR01848,PROFILE:PS50102,PROFILE:PS50103,SMART:SM00356,SMART:SM00360,SMART:SM00361,SwissProt:Q9FMY5,SwissProt:Q9S709,SwissProt:Q9ZQW8,TAIR:AT1G10320.1,TAIR:AT1G27650.1,TAIR:AT5G42820.2,TrEMBL:B9SN77,TrEMBL:D5ABW9,TrEMBL:Q99L29;Derives_from=GSCOCT00024058001;Name=Cc01_g09880;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,GO:0003723,GO:0005634,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Splicing factor U2af small subunit A,CC_functional_completeness:complete,CC_gene:U2AF35A,CC_gene:U2AF35B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024058001~ Splicing factor U2af small subunit A~ U2AF35A~ complete;original_location=complement(join(1499993..1500229%2C1498897..1498983%2C1498714..1498795%2C1498452..1498578%2C1498097..1498366%2C1497945..1498017%2C1497802..1497828));owner=coffea | |
| 12691 chr1 manual_curation exon 28527568 28528943 . - . Parent=GSCOCT00024058001 | |
| 12692 chr1 manual_curation exon 28529060 28529132 . - . Parent=GSCOCT00024058001 | |
| 12693 chr1 manual_curation exon 28529212 28529481 . - . Parent=GSCOCT00024058001 | |
| 12694 chr1 manual_curation exon 28529567 28529693 . - . Parent=GSCOCT00024058001 | |
| 12695 chr1 manual_curation exon 28529829 28529910 . - . Parent=GSCOCT00024058001 | |
| 12696 chr1 manual_curation exon 28530012 28530098 . - . Parent=GSCOCT00024058001 | |
| 12697 chr1 manual_curation exon 28531108 28531510 . - . Parent=GSCOCT00024058001 | |
| 12698 chr1 manual_curation CDS 28528917 28528943 . - 0 Parent=GSCOCT00024058001 | |
| 12699 chr1 manual_curation CDS 28529060 28529132 . - 2 Parent=GSCOCT00024058001 | |
| 12700 chr1 manual_curation CDS 28529212 28529481 . - 2 Parent=GSCOCT00024058001 | |
| 12701 chr1 manual_curation CDS 28529567 28529693 . - 1 Parent=GSCOCT00024058001 | |
| 12702 chr1 manual_curation CDS 28529829 28529910 . - 0 Parent=GSCOCT00024058001 | |
| 12703 chr1 manual_curation CDS 28530012 28530098 . - 0 Parent=GSCOCT00024058001 | |
| 12704 chr1 manual_curation CDS 28531108 28531344 . - 0 Parent=GSCOCT00024058001 | |
| 12705 chr1 manual_curation gene 28538614 28545230 . - . ID=GSCOCG00024060001;Name=Cc01_g09890 | |
| 12706 chr1 manual_curation mRNA 28538614 28545230 . - . ID=GSCOCT00024060001;Parent=GSCOCG00024060001;Name=Cc01_g09890 | |
| 12707 chr1 manual_curation polypeptide 28539005 28544659 . - . ID=GSCOCP00024060001;Dbxref=InterPro:IPR001173,PFAM:PF00535,SwissProt:Q67VS7,SwissProt:Q9FNI7,SwissProt:Q9LZR3,TAIR:AT1G23480.1,TAIR:AT5G03760.1,TAIR:AT5G22740.1,TrEMBL:B4YYG1,TrEMBL:C8YZA8,TrEMBL:F6GW55;Derives_from=GSCOCT00024060001;Name=Cc01_g09890;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.4.1.12,PRODUCT:Glucomannan 4-beta-mannosyltransferase 2,CC_functional_completeness:complete,CC_gene:CSLA2,CC_gene:CSLA9;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024060001~ Glucomannan 4-beta-mannosyltransferase 2~ CSLA2~ complete;original_location=complement(join(1513209..1513544%2C1512958..1513056%2C1512016..1512268%2C1509732..1509842%2C1509026..1509162%2C1508831..1508944%2C1508523..1508722%2C1508201..1508401%2C1507890..1508052));owner=coffea | |
| 12708 chr1 manual_curation exon 28538614 28539167 . - . Parent=GSCOCT00024060001 | |
| 12709 chr1 manual_curation exon 28539316 28539516 . - . Parent=GSCOCT00024060001 | |
| 12710 chr1 manual_curation exon 28539638 28539837 . - . Parent=GSCOCT00024060001 | |
| 12711 chr1 manual_curation exon 28539946 28540059 . - . Parent=GSCOCT00024060001 | |
| 12712 chr1 manual_curation exon 28540141 28540277 . - . Parent=GSCOCT00024060001 | |
| 12713 chr1 manual_curation exon 28540847 28540957 . - . Parent=GSCOCT00024060001 | |
| 12714 chr1 manual_curation exon 28543131 28543383 . - . Parent=GSCOCT00024060001 | |
| 12715 chr1 manual_curation exon 28544073 28544171 . - . Parent=GSCOCT00024060001 | |
| 12716 chr1 manual_curation exon 28544324 28545230 . - . Parent=GSCOCT00024060001 | |
| 12717 chr1 manual_curation CDS 28539005 28539167 . - 2 Parent=GSCOCT00024060001 | |
| 12718 chr1 manual_curation CDS 28539316 28539516 . - 2 Parent=GSCOCT00024060001 | |
| 12719 chr1 manual_curation CDS 28539638 28539837 . - 0 Parent=GSCOCT00024060001 | |
| 12720 chr1 manual_curation CDS 28539946 28540059 . - 0 Parent=GSCOCT00024060001 | |
| 12721 chr1 manual_curation CDS 28540141 28540277 . - 1 Parent=GSCOCT00024060001 | |
| 12722 chr1 manual_curation CDS 28540847 28540957 . - 1 Parent=GSCOCT00024060001 | |
| 12723 chr1 manual_curation CDS 28543131 28543383 . - 0 Parent=GSCOCT00024060001 | |
| 12724 chr1 manual_curation CDS 28544073 28544171 . - 0 Parent=GSCOCT00024060001 | |
| 12725 chr1 manual_curation CDS 28544324 28544659 . - 0 Parent=GSCOCT00024060001 | |
| 12726 chr1 manual_curation gene 28570095 28574983 . + . ID=GSCOCG00024061001;Name=Cc01_g09900 | |
| 12727 chr1 manual_curation mRNA 28570095 28574983 . + . ID=GSCOCT00024061001;Parent=GSCOCG00024061001;Name=Cc01_g09900 | |
| 12728 chr1 manual_curation polypeptide 28570216 28574767 . + . ID=GSCOCP00024061001;Dbxref=InterPro:IPR013057,PFAM:PF01490,SwissProt:Q9C733,SwissProt:Q9FKS8,SwissProt:Q9LRB5,TAIR:AT1G08230.2,TAIR:AT5G40780.1,TAIR:AT5G41800.1,TrEMBL:B9SN74,TrEMBL:F6GW57,TrEMBL:G7JM48;Derives_from=GSCOCT00024061001;Name=Cc01_g09900;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Lysine histidine transporter 1,CC_functional_completeness:complete,CC_gene:LHT1,CC_gene:At1g48640,CC_gene:LHT2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024061001~ Putative Lysine histidine transporter 1~ LHT1~ complete;original_location=join(1539101..1539227%2C1540205..1540435%2C1541793..1541890%2C1542069..1542255%2C1542354..1542484%2C1542653..1542886%2C1543272..1543652);owner=coffea | |
| 12729 chr1 manual_curation exon 28570095 28570342 . + . Parent=GSCOCT00024061001 | |
| 12730 chr1 manual_curation exon 28571320 28571550 . + . Parent=GSCOCT00024061001 | |
| 12731 chr1 manual_curation exon 28572908 28573005 . + . Parent=GSCOCT00024061001 | |
| 12732 chr1 manual_curation exon 28573184 28573370 . + . Parent=GSCOCT00024061001 | |
| 12733 chr1 manual_curation exon 28573469 28573599 . + . Parent=GSCOCT00024061001 | |
| 12734 chr1 manual_curation exon 28573768 28574001 . + . Parent=GSCOCT00024061001 | |
| 12735 chr1 manual_curation exon 28574387 28574983 . + . Parent=GSCOCT00024061001 | |
| 12736 chr1 manual_curation CDS 28570216 28570342 . + 0 Parent=GSCOCT00024061001 | |
| 12737 chr1 manual_curation CDS 28571320 28571550 . + 1 Parent=GSCOCT00024061001 | |
| 12738 chr1 manual_curation CDS 28572908 28573005 . + 1 Parent=GSCOCT00024061001 | |
| 12739 chr1 manual_curation CDS 28573184 28573370 . + 0 Parent=GSCOCT00024061001 | |
| 12740 chr1 manual_curation CDS 28573469 28573599 . + 1 Parent=GSCOCT00024061001 | |
| 12741 chr1 manual_curation CDS 28573768 28574001 . + 0 Parent=GSCOCT00024061001 | |
| 12742 chr1 manual_curation CDS 28574387 28574767 . + 0 Parent=GSCOCT00024061001 | |
| 12743 chr1 manual_curation gene 28575041 28577978 . - . ID=GSCOCG00024062001;Name=Cc01_g09910 | |
| 12744 chr1 manual_curation mRNA 28575041 28577978 . - . ID=GSCOCT00024062001;Parent=GSCOCG00024062001;Name=Cc01_g09910 | |
| 12745 chr1 manual_curation polypeptide 28575417 28577945 . - . ID=GSCOCP00024062001;Dbxref=InterPro:IPR021475,PFAM:PF11326,TAIR:AT4G25315.1,TrEMBL:A5B119,TrEMBL:C6SWL5,TrEMBL:D7T040;Derives_from=GSCOCT00024062001;Name=Cc01_g09910;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Expressed protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024062001~ Expressed protein~ unknown_gene~ complete;original_location=complement(join(1546746..1546830%2C1546232..1546350%2C1544302..1544415));owner=coffea | |
| 12746 chr1 manual_curation exon 28575041 28575530 . - . Parent=GSCOCT00024062001 | |
| 12747 chr1 manual_curation exon 28577347 28577465 . - . Parent=GSCOCT00024062001 | |
| 12748 chr1 manual_curation exon 28577861 28577978 . - . Parent=GSCOCT00024062001 | |
| 12749 chr1 manual_curation CDS 28575417 28575530 . - 0 Parent=GSCOCT00024062001 | |
| 12750 chr1 manual_curation CDS 28577347 28577465 . - 1 Parent=GSCOCT00024062001 | |
| 12751 chr1 manual_curation CDS 28577861 28577945 . - 0 Parent=GSCOCT00024062001 | |
| 12752 chr1 manual_curation gene 28578953 28586127 . - . ID=GSCOCG00024064001;Name=Cc01_g09920 | |
| 12753 chr1 manual_curation mRNA 28578953 28586127 . - . ID=GSCOCT00024064001;Parent=GSCOCG00024064001;Name=Cc01_g09920 | |
| 12754 chr1 manual_curation polypeptide 28578953 28585887 . - . ID=GSCOCP00024064001;Dbxref=InterPro:IPR000330,InterPro:IPR001650,InterPro:IPR001841,InterPro:IPR014001,InterPro:IPR014021,InterPro:IPR014905,InterPro:IPR017907,InterPro:IPR018957,PFAM:PF00097,PFAM:PF00176,PFAM:PF00271,PFAM:PF08797,PROFILE:PS50089,PROFILE:PS51192,PROFILE:PS51194,PROSITE:PS00518,SMART:SM00184,SMART:SM00487,SMART:SM00490,SwissProt:Q4IJ84,SwissProt:Q9FIY7,SwissProt:Q9FNI6,TAIR:AT5G05130.1,TAIR:AT5G22750.1,TAIR:AT5G43530.1,TrEMBL:B9SN70,TrEMBL:F6GW58,TrEMBL:Q6JJ38;Derives_from=GSCOCT00024064001;Name=Cc01_g09920;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0003677,GO:0004386,GO:0005515,GO:0005524,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2,CC_functional_completeness:complete,CC_gene:At5g22750,CC_gene:At5g43530,CC_gene:RAD5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024064001~ Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2~ At5g22750~ complete;original_location=complement(join(1554492..1554772%2C1554158..1554428%2C1553753..1553886%2C1553511..1553640%2C1553244..1553297%2C1552996..1553145%2C1552727..1552878%2C1552534..1552618%2C1552186..1552455%2C1551911..1552057%2C1551548..1551703%2C1551203..1551270%2C1550747..1550869%2C1550558..1550657%2C1550369..1550481%2C1549594..1549872%2C1549283..1549483%2C1548758..1548851%2C1548585..1548656%2C1548175..1548273%2C1547838..1547960));owner=coffea | |
| 12755 chr1 manual_curation exon 28578953 28579075 . - . Parent=GSCOCT00024064001 | |
| 12756 chr1 manual_curation exon 28579290 28579388 . - . Parent=GSCOCT00024064001 | |
| 12757 chr1 manual_curation exon 28579700 28579771 . - . Parent=GSCOCT00024064001 | |
| 12758 chr1 manual_curation exon 28579873 28579966 . - . Parent=GSCOCT00024064001 | |
| 12759 chr1 manual_curation exon 28580398 28580598 . - . Parent=GSCOCT00024064001 | |
| 12760 chr1 manual_curation exon 28580709 28580987 . - . Parent=GSCOCT00024064001 | |
| 12761 chr1 manual_curation exon 28581484 28581596 . - . Parent=GSCOCT00024064001 | |
| 12762 chr1 manual_curation exon 28581673 28581772 . - . Parent=GSCOCT00024064001 | |
| 12763 chr1 manual_curation exon 28581862 28581984 . - . Parent=GSCOCT00024064001 | |
| 12764 chr1 manual_curation exon 28582318 28582385 . - . Parent=GSCOCT00024064001 | |
| 12765 chr1 manual_curation exon 28582663 28582818 . - . Parent=GSCOCT00024064001 | |
| 12766 chr1 manual_curation exon 28583026 28583172 . - . Parent=GSCOCT00024064001 | |
| 12767 chr1 manual_curation exon 28583301 28583570 . - . Parent=GSCOCT00024064001 | |
| 12768 chr1 manual_curation exon 28583649 28583733 . - . Parent=GSCOCT00024064001 | |
| 12769 chr1 manual_curation exon 28583842 28583993 . - . Parent=GSCOCT00024064001 | |
| 12770 chr1 manual_curation exon 28584111 28584260 . - . Parent=GSCOCT00024064001 | |
| 12771 chr1 manual_curation exon 28584359 28584412 . - . Parent=GSCOCT00024064001 | |
| 12772 chr1 manual_curation exon 28584626 28584755 . - . Parent=GSCOCT00024064001 | |
| 12773 chr1 manual_curation exon 28584868 28585001 . - . Parent=GSCOCT00024064001 | |
| 12774 chr1 manual_curation exon 28585273 28585543 . - . Parent=GSCOCT00024064001 | |
| 12775 chr1 manual_curation exon 28585607 28586127 . - . Parent=GSCOCT00024064001 | |
| 12776 chr1 manual_curation CDS 28578953 28579075 . - 0 Parent=GSCOCT00024064001 | |
| 12777 chr1 manual_curation CDS 28579290 28579388 . - 0 Parent=GSCOCT00024064001 | |
| 12778 chr1 manual_curation CDS 28579700 28579771 . - 0 Parent=GSCOCT00024064001 | |
| 12779 chr1 manual_curation CDS 28579873 28579966 . - 2 Parent=GSCOCT00024064001 | |
| 12780 chr1 manual_curation CDS 28580398 28580598 . - 2 Parent=GSCOCT00024064001 | |
| 12781 chr1 manual_curation CDS 28580709 28580987 . - 2 Parent=GSCOCT00024064001 | |
| 12782 chr1 manual_curation CDS 28581484 28581596 . - 0 Parent=GSCOCT00024064001 | |
| 12783 chr1 manual_curation CDS 28581673 28581772 . - 2 Parent=GSCOCT00024064001 | |
| 12784 chr1 manual_curation CDS 28581862 28581984 . - 2 Parent=GSCOCT00024064001 | |
| 12785 chr1 manual_curation CDS 28582318 28582385 . - 0 Parent=GSCOCT00024064001 | |
| 12786 chr1 manual_curation CDS 28582663 28582818 . - 0 Parent=GSCOCT00024064001 | |
| 12787 chr1 manual_curation CDS 28583026 28583172 . - 0 Parent=GSCOCT00024064001 | |
| 12788 chr1 manual_curation CDS 28583301 28583570 . - 0 Parent=GSCOCT00024064001 | |
| 12789 chr1 manual_curation CDS 28583649 28583733 . - 2 Parent=GSCOCT00024064001 | |
| 12790 chr1 manual_curation CDS 28583842 28583993 . - 0 Parent=GSCOCT00024064001 | |
| 12791 chr1 manual_curation CDS 28584111 28584260 . - 0 Parent=GSCOCT00024064001 | |
| 12792 chr1 manual_curation CDS 28584359 28584412 . - 0 Parent=GSCOCT00024064001 | |
| 12793 chr1 manual_curation CDS 28584626 28584755 . - 2 Parent=GSCOCT00024064001 | |
| 12794 chr1 manual_curation CDS 28584868 28585001 . - 0 Parent=GSCOCT00024064001 | |
| 12795 chr1 manual_curation CDS 28585273 28585543 . - 2 Parent=GSCOCT00024064001 | |
| 12796 chr1 manual_curation CDS 28585607 28585887 . - 0 Parent=GSCOCT00024064001 | |
| 12797 chr1 manual_curation gene 28599986 28610153 . + . ID=GSCOCG00024067001;Name=Cc01_g09930 | |
| 12798 chr1 manual_curation mRNA 28599986 28610153 . + . ID=GSCOCT00024067001;Parent=GSCOCG00024067001;Name=Cc01_g09930 | |
| 12799 chr1 manual_curation polypeptide 28600521 28609574 . + . ID=GSCOCP00024067001;Dbxref=InterPro:IPR001965,InterPro:IPR004022,InterPro:IPR011011,InterPro:IPR018500,InterPro:IPR018501,InterPro:IPR019786,InterPro:IPR019787,PFAM:PF00628,PFAM:PF02791,PROFILE:PS50016,PROFILE:PS50827,PROSITE:PS01359,SMART:SM00249,SMART:SM00571,SUPERFAMILY:SSF57903,TAIR:AT5G12400.1,TAIR:AT5G22760.1,TAIR:AT5G35210.1,TrEMBL:B9HQK7,TrEMBL:F6GW59,TrEMBL:I1INV3;Derives_from=GSCOCT00024067001;Name=Cc01_g09930;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative PHD finger family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024067001~ Putative PHD finger family protein~ unknown_gene~ complete;original_location=join(1569406..1570253%2C1570754..1571458%2C1571562..1572780%2C1573724..1574015%2C1574153..1574280%2C1574446..1574912%2C1574999..1575027%2C1576946..1577425%2C1577519..1578459);owner=coffea | |
| 12800 chr1 manual_curation exon 28599986 28600192 . + . Parent=GSCOCT00024067001 | |
| 12801 chr1 manual_curation exon 28600383 28601368 . + . Parent=GSCOCT00024067001 | |
| 12802 chr1 manual_curation exon 28601869 28602573 . + . Parent=GSCOCT00024067001 | |
| 12803 chr1 manual_curation exon 28602677 28603895 . + . Parent=GSCOCT00024067001 | |
| 12804 chr1 manual_curation exon 28604839 28605130 . + . Parent=GSCOCT00024067001 | |
| 12805 chr1 manual_curation exon 28605268 28605395 . + . Parent=GSCOCT00024067001 | |
| 12806 chr1 manual_curation exon 28605561 28606027 . + . Parent=GSCOCT00024067001 | |
| 12807 chr1 manual_curation exon 28606114 28606142 . + . Parent=GSCOCT00024067001 | |
| 12808 chr1 manual_curation exon 28608061 28608540 . + . Parent=GSCOCT00024067001 | |
| 12809 chr1 manual_curation exon 28608634 28610153 . + . Parent=GSCOCT00024067001 | |
| 12810 chr1 manual_curation CDS 28600521 28601368 . + 0 Parent=GSCOCT00024067001 | |
| 12811 chr1 manual_curation CDS 28601869 28602573 . + 2 Parent=GSCOCT00024067001 | |
| 12812 chr1 manual_curation CDS 28602677 28603895 . + 2 Parent=GSCOCT00024067001 | |
| 12813 chr1 manual_curation CDS 28604839 28605130 . + 0 Parent=GSCOCT00024067001 | |
| 12814 chr1 manual_curation CDS 28605268 28605395 . + 1 Parent=GSCOCT00024067001 | |
| 12815 chr1 manual_curation CDS 28605561 28606027 . + 0 Parent=GSCOCT00024067001 | |
| 12816 chr1 manual_curation CDS 28606114 28606142 . + 2 Parent=GSCOCT00024067001 | |
| 12817 chr1 manual_curation CDS 28608061 28608540 . + 1 Parent=GSCOCT00024067001 | |
| 12818 chr1 manual_curation CDS 28608634 28609574 . + 1 Parent=GSCOCT00024067001 | |
| 12819 chr1 manual_curation gene 28616857 28629482 . - . ID=GSCOCG00024069001;Name=Cc01_g09940 | |
| 12820 chr1 manual_curation mRNA 28616857 28629482 . - . ID=GSCOCT00024069001;Parent=GSCOCG00024069001;Name=Cc01_g09940 | |
| 12821 chr1 manual_curation polypeptide 28617325 28629227 . - . ID=GSCOCP00024069001;Dbxref=GENE3D:G3DSA:1.25.10.10,GENE3D:G3DSA:2.60.40.1030,GENE3D:G3DSA:3.30.310.30,InterPro:IPR002553,InterPro:IPR003164,InterPro:IPR008152,InterPro:IPR009028,InterPro:IPR011989,InterPro:IPR013038,InterPro:IPR013041,InterPro:IPR015873,InterPro:IPR016024,InterPro:IPR017104,PFAM:PF01602,PFAM:PF02296,PFAM:PF02883,PIR:PIRSF037091,SMART:SM00809,SUPERFAMILY:SSF48371,SUPERFAMILY:SSF49348,SUPERFAMILY:SSF55711,SwissProt:Q29N38,SwissProt:Q8LPK4,SwissProt:Q8LPL6,TAIR:AT1G23900.1,TAIR:AT5G22770.1,TAIR:AT5G22780.1,TrEMBL:B9SN68,TrEMBL:D7SN66,TrEMBL:Q6JJ39;Derives_from=GSCOCT00024069001;Name=Cc01_g09940;Ontology_term=CC_evidence_code:ISS,GO:0005488,GO:0005515,GO:0006886,GO:0008565,GO:0015031,GO:0016020,GO:0016192,GO:0030117,GO:0030131,CC_EC_number:missing_EC_number,PRODUCT:AP-2 complex subunit alpha-2,CC_functional_completeness:complete,CC_gene:ALPHAC-AD,CC_gene:ALPHA-ADR,CC_gene:alpha-Adaptin;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024069001~ AP-2 complex subunit alpha-2~ ALPHAC-AD~ complete;original_location=complement(join(1597981..1598112%2C1595455..1595586%2C1594378..1594503%2C1594222..1594284%2C1594047..1594144%2C1593757..1593964%2C1592785..1592856%2C1592584..1592676%2C1591833..1591934%2C1591508..1591605%2C1590874..1590955%2C1590611..1590699%2C1590177..1590282%2C1590031..1590096%2C1589438..1589544%2C1589251..1589355%2C1589041..1589161%2C1588692..1588871%2C1588372..1588590%2C1587915..1587995%2C1587655..1587819%2C1587473..1587559%2C1587174..1587299%2C1587004..1587084%2C1586834..1586905%2C1586460..1586539%2C1586210..1586357));owner=coffea | |
| 12822 chr1 manual_curation exon 28616857 28617472 . - . Parent=GSCOCT00024069001 | |
| 12823 chr1 manual_curation exon 28617575 28617654 . - . Parent=GSCOCT00024069001 | |
| 12824 chr1 manual_curation exon 28617949 28618020 . - . Parent=GSCOCT00024069001 | |
| 12825 chr1 manual_curation exon 28618119 28618199 . - . Parent=GSCOCT00024069001 | |
| 12826 chr1 manual_curation exon 28618289 28618414 . - . Parent=GSCOCT00024069001 | |
| 12827 chr1 manual_curation exon 28618588 28618674 . - . Parent=GSCOCT00024069001 | |
| 12828 chr1 manual_curation exon 28618770 28618934 . - . Parent=GSCOCT00024069001 | |
| 12829 chr1 manual_curation exon 28619030 28619110 . - . Parent=GSCOCT00024069001 | |
| 12830 chr1 manual_curation exon 28619487 28619705 . - . Parent=GSCOCT00024069001 | |
| 12831 chr1 manual_curation exon 28619807 28619986 . - . Parent=GSCOCT00024069001 | |
| 12832 chr1 manual_curation exon 28620156 28620276 . - . Parent=GSCOCT00024069001 | |
| 12833 chr1 manual_curation exon 28620366 28620470 . - . Parent=GSCOCT00024069001 | |
| 12834 chr1 manual_curation exon 28620553 28620659 . - . Parent=GSCOCT00024069001 | |
| 12835 chr1 manual_curation exon 28621146 28621211 . - . Parent=GSCOCT00024069001 | |
| 12836 chr1 manual_curation exon 28621292 28621397 . - . Parent=GSCOCT00024069001 | |
| 12837 chr1 manual_curation exon 28621726 28621814 . - . Parent=GSCOCT00024069001 | |
| 12838 chr1 manual_curation exon 28621989 28622070 . - . Parent=GSCOCT00024069001 | |
| 12839 chr1 manual_curation exon 28622623 28622720 . - . Parent=GSCOCT00024069001 | |
| 12840 chr1 manual_curation exon 28622948 28623049 . - . Parent=GSCOCT00024069001 | |
| 12841 chr1 manual_curation exon 28623699 28623791 . - . Parent=GSCOCT00024069001 | |
| 12842 chr1 manual_curation exon 28623900 28623971 . - . Parent=GSCOCT00024069001 | |
| 12843 chr1 manual_curation exon 28624872 28625079 . - . Parent=GSCOCT00024069001 | |
| 12844 chr1 manual_curation exon 28625162 28625259 . - . Parent=GSCOCT00024069001 | |
| 12845 chr1 manual_curation exon 28625337 28625399 . - . Parent=GSCOCT00024069001 | |
| 12846 chr1 manual_curation exon 28625493 28625618 . - . Parent=GSCOCT00024069001 | |
| 12847 chr1 manual_curation exon 28626570 28626701 . - . Parent=GSCOCT00024069001 | |
| 12848 chr1 manual_curation exon 28629096 28629482 . - . Parent=GSCOCT00024069001 | |
| 12849 chr1 manual_curation CDS 28617325 28617472 . - 2 Parent=GSCOCT00024069001 | |
| 12850 chr1 manual_curation CDS 28617575 28617654 . - 0 Parent=GSCOCT00024069001 | |
| 12851 chr1 manual_curation CDS 28617949 28618020 . - 0 Parent=GSCOCT00024069001 | |
| 12852 chr1 manual_curation CDS 28618119 28618199 . - 0 Parent=GSCOCT00024069001 | |
| 12853 chr1 manual_curation CDS 28618289 28618414 . - 0 Parent=GSCOCT00024069001 | |
| 12854 chr1 manual_curation CDS 28618588 28618674 . - 0 Parent=GSCOCT00024069001 | |
| 12855 chr1 manual_curation CDS 28618770 28618934 . - 0 Parent=GSCOCT00024069001 | |
| 12856 chr1 manual_curation CDS 28619030 28619110 . - 0 Parent=GSCOCT00024069001 | |
| 12857 chr1 manual_curation CDS 28619487 28619705 . - 0 Parent=GSCOCT00024069001 | |
| 12858 chr1 manual_curation CDS 28619807 28619986 . - 0 Parent=GSCOCT00024069001 | |
| 12859 chr1 manual_curation CDS 28620156 28620276 . - 2 Parent=GSCOCT00024069001 | |
| 12860 chr1 manual_curation CDS 28620366 28620470 . - 2 Parent=GSCOCT00024069001 | |
| 12861 chr1 manual_curation CDS 28620553 28620659 . - 0 Parent=GSCOCT00024069001 | |
| 12862 chr1 manual_curation CDS 28621146 28621211 . - 0 Parent=GSCOCT00024069001 | |
| 12863 chr1 manual_curation CDS 28621292 28621397 . - 2 Parent=GSCOCT00024069001 | |
| 12864 chr1 manual_curation CDS 28621726 28621814 . - 0 Parent=GSCOCT00024069001 | |
| 12865 chr1 manual_curation CDS 28621989 28622070 . - 2 Parent=GSCOCT00024069001 | |
| 12866 chr1 manual_curation CDS 28622623 28622720 . - 0 Parent=GSCOCT00024069001 | |
| 12867 chr1 manual_curation CDS 28622948 28623049 . - 0 Parent=GSCOCT00024069001 | |
| 12868 chr1 manual_curation CDS 28623699 28623791 . - 0 Parent=GSCOCT00024069001 | |
| 12869 chr1 manual_curation CDS 28623900 28623971 . - 0 Parent=GSCOCT00024069001 | |
| 12870 chr1 manual_curation CDS 28624872 28625079 . - 2 Parent=GSCOCT00024069001 | |
| 12871 chr1 manual_curation CDS 28625162 28625259 . - 0 Parent=GSCOCT00024069001 | |
| 12872 chr1 manual_curation CDS 28625337 28625399 . - 0 Parent=GSCOCT00024069001 | |
| 12873 chr1 manual_curation CDS 28625493 28625618 . - 0 Parent=GSCOCT00024069001 | |
| 12874 chr1 manual_curation CDS 28626570 28626701 . - 0 Parent=GSCOCT00024069001 | |
| 12875 chr1 manual_curation CDS 28629096 28629227 . - 0 Parent=GSCOCT00024069001 | |
| 12876 chr1 manual_curation gene 28633456 28638100 . - . ID=GSCOCG00024071001;Name=Cc01_g09950 | |
| 12877 chr1 manual_curation mRNA 28633456 28638100 . - . ID=GSCOCT00024071001;Parent=GSCOCG00024071001;Name=Cc01_g09950 | |
| 12878 chr1 manual_curation polypeptide 28633456 28638100 . - . ID=GSCOCP00024071001;Dbxref=InterPro:IPR021825,PFAM:PF11891,TAIR:AT2G37860.3,TAIR:AT5G12470.1,TAIR:AT5G22790.1,TrEMBL:F6GW60,TrEMBL:F6HL27,TrEMBL:I1KK44;Derives_from=GSCOCT00024071001;Name=Cc01_g09950;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of unknown function DUF3411,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024071001~ Putative Protein of unknown function DUF3411~ unknown_gene~ complete;original_location=complement(join(1606458..1606985%2C1606232..1606330%2C1605469..1605689%2C1604523..1604592%2C1604177..1604256%2C1603380..1603444%2C1602341..1602534));owner=coffea | |
| 12879 chr1 manual_curation exon 28633456 28633649 . - . Parent=GSCOCT00024071001 | |
| 12880 chr1 manual_curation exon 28634495 28634559 . - . Parent=GSCOCT00024071001 | |
| 12881 chr1 manual_curation exon 28635292 28635371 . - . Parent=GSCOCT00024071001 | |
| 12882 chr1 manual_curation exon 28635638 28635707 . - . Parent=GSCOCT00024071001 | |
| 12883 chr1 manual_curation exon 28636584 28636804 . - . Parent=GSCOCT00024071001 | |
| 12884 chr1 manual_curation exon 28637347 28637445 . - . Parent=GSCOCT00024071001 | |
| 12885 chr1 manual_curation exon 28637573 28638100 . - . Parent=GSCOCT00024071001 | |
| 12886 chr1 manual_curation CDS 28633456 28633649 . - 1 Parent=GSCOCT00024071001 | |
| 12887 chr1 manual_curation CDS 28634495 28634559 . - 2 Parent=GSCOCT00024071001 | |
| 12888 chr1 manual_curation CDS 28635292 28635371 . - 0 Parent=GSCOCT00024071001 | |
| 12889 chr1 manual_curation CDS 28635638 28635707 . - 2 Parent=GSCOCT00024071001 | |
| 12890 chr1 manual_curation CDS 28636584 28636804 . - 0 Parent=GSCOCT00024071001 | |
| 12891 chr1 manual_curation CDS 28637347 28637445 . - 0 Parent=GSCOCT00024071001 | |
| 12892 chr1 manual_curation CDS 28637573 28638100 . - 0 Parent=GSCOCT00024071001 | |
| 12893 chr1 manual_curation gene 28639579 28645327 . - . ID=GSCOCG00024072001;Name=Cc01_g09960 | |
| 12894 chr1 manual_curation mRNA 28639579 28645327 . - . ID=GSCOCT00024072001;Parent=GSCOCG00024072001;Name=Cc01_g09960 | |
| 12895 chr1 manual_curation polypeptide 28640153 28644303 . - . ID=GSCOCP00024072001;Dbxref=GENE3D:G3DSA:3.30.710.10,InterPro:IPR000210,InterPro:IPR004249,InterPro:IPR011333,InterPro:IPR013069,InterPro:IPR013089,PANTHER:PTHR23230,PFAM:PF00651,PFAM:PF03000,PROFILE:PS50097,SMART:SM00225,SUPERFAMILY:SSF54695,SwissProt:Q9FYC8,SwissProt:Q9LYW0,SwissProt:Q9S9Q9,TAIR:AT1G30440.1,TAIR:AT3G44820.1,TAIR:AT5G03250.1,TrEMBL:B9SN66,TrEMBL:F6GW62,TrEMBL:Q6JJ40;Derives_from=GSCOCT00024072001;Name=Cc01_g09960;Ontology_term=CC_evidence_code:ISS,GO:0004871,GO:0005515,GO:0009416,CC_EC_number:missing_EC_number,PRODUCT:BTB/POZ domain-containing protein At3g44820,CC_functional_completeness:complete,CC_gene:At3g44820,CC_gene:At1g30440,CC_gene:At5g03250;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024072001~ BTB/POZ domain-containing protein At3g44820~ At3g44820~ complete;original_location=complement(join(1613139..1613188%2C1612447..1612516%2C1610510..1611721%2C1609038..1609607));owner=coffea | |
| 12896 chr1 manual_curation exon 28639579 28640722 . - . Parent=GSCOCT00024072001 | |
| 12897 chr1 manual_curation exon 28641625 28642836 . - . Parent=GSCOCT00024072001 | |
| 12898 chr1 manual_curation exon 28643562 28643631 . - . Parent=GSCOCT00024072001 | |
| 12899 chr1 manual_curation exon 28644254 28645327 . - . Parent=GSCOCT00024072001 | |
| 12900 chr1 manual_curation CDS 28640153 28640722 . - 0 Parent=GSCOCT00024072001 | |
| 12901 chr1 manual_curation CDS 28641625 28642836 . - 0 Parent=GSCOCT00024072001 | |
| 12902 chr1 manual_curation CDS 28643562 28643631 . - 2 Parent=GSCOCT00024072001 | |
| 12903 chr1 manual_curation CDS 28644254 28644303 . - 0 Parent=GSCOCT00024072001 | |
| 12904 chr1 manual_curation gene 28647842 28652233 . - . ID=GSCOCG00024074001;Name=Cc01_g09970 | |
| 12905 chr1 manual_curation mRNA 28647842 28652233 . - . ID=GSCOCT00024074001;Parent=GSCOCG00024074001;Name=Cc01_g09970 | |
| 12906 chr1 manual_curation polypeptide 28648228 28652015 . - . ID=GSCOCP00024074001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR001509,InterPro:IPR016040,PFAM:PF01370,SwissProt:C6DAW5,SwissProt:Q4ZSZ2,SwissProt:Q6D2F1,TAIR:AT1G08200.1,TAIR:AT2G27860.1,TAIR:AT3G46440.1,TrEMBL:D2D333,TrEMBL:D7TU58,TrEMBL:I1LTQ1;Derives_from=GSCOCT00024074001;Name=Cc01_g09970;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,GO:0044237,GO:0050662,CC_EC_number:4.1.1.35,PRODUCT:Putative Bifunctional polymyxin resistance protein ArnA,CC_functional_completeness:fragment,CC_gene:arnA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024074001~ Putative Bifunctional polymyxin resistance protein ArnA~ arnA~ fragment;original_location=complement(join(1620634..1620900%2C1620089..1620181%2C1619767..1619874%2C1618148..1618262%2C1617935..1618068%2C1617737..1617838%2C1617564..1617656%2C1617320..1617455%2C1617113..1617225));owner=coffea | |
| 12907 chr1 manual_curation exon 28647842 28648340 . - . Parent=GSCOCT00024074001 | |
| 12908 chr1 manual_curation exon 28648435 28648570 . - . Parent=GSCOCT00024074001 | |
| 12909 chr1 manual_curation exon 28648679 28648771 . - . Parent=GSCOCT00024074001 | |
| 12910 chr1 manual_curation exon 28648852 28648953 . - . Parent=GSCOCT00024074001 | |
| 12911 chr1 manual_curation exon 28649050 28649183 . - . Parent=GSCOCT00024074001 | |
| 12912 chr1 manual_curation exon 28649263 28649377 . - . Parent=GSCOCT00024074001 | |
| 12913 chr1 manual_curation exon 28650882 28650989 . - . Parent=GSCOCT00024074001 | |
| 12914 chr1 manual_curation exon 28651204 28651296 . - . Parent=GSCOCT00024074001 | |
| 12915 chr1 manual_curation exon 28651749 28652233 . - . Parent=GSCOCT00024074001 | |
| 12916 chr1 manual_curation CDS 28648228 28648340 . - 1 Parent=GSCOCT00024074001 | |
| 12917 chr1 manual_curation CDS 28648435 28648570 . - 0 Parent=GSCOCT00024074001 | |
| 12918 chr1 manual_curation CDS 28648679 28648771 . - 0 Parent=GSCOCT00024074001 | |
| 12919 chr1 manual_curation CDS 28648852 28648953 . - 0 Parent=GSCOCT00024074001 | |
| 12920 chr1 manual_curation CDS 28649050 28649183 . - 1 Parent=GSCOCT00024074001 | |
| 12921 chr1 manual_curation CDS 28649263 28649377 . - 0 Parent=GSCOCT00024074001 | |
| 12922 chr1 manual_curation CDS 28650882 28650989 . - 0 Parent=GSCOCT00024074001 | |
| 12923 chr1 manual_curation CDS 28651204 28651296 . - 0 Parent=GSCOCT00024074001 | |
| 12924 chr1 manual_curation CDS 28651749 28652015 . - 0 Parent=GSCOCT00024074001 | |
| 12925 chr1 manual_curation gene 28660350 28661085 . - . ID=GSCOCG00024076001;Name=Cc01_g09980 | |
| 12926 chr1 manual_curation mRNA 28660350 28661085 . - . ID=GSCOCT00024076001;Parent=GSCOCG00024076001;Name=Cc01_g09980 | |
| 12927 chr1 manual_curation polypeptide 28660350 28660858 . - . ID=GSCOCP00024076001;Derives_from=GSCOCT00024076001;Name=Cc01_g09980;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024076001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1629579..1629743%2C1629235..1629267));owner=coffea | |
| 12928 chr1 manual_curation exon 28660350 28660382 . - . Parent=GSCOCT00024076001 | |
| 12929 chr1 manual_curation exon 28660694 28661085 . - . Parent=GSCOCT00024076001 | |
| 12930 chr1 manual_curation CDS 28660350 28660382 . - 0 Parent=GSCOCT00024076001 | |
| 12931 chr1 manual_curation CDS 28660694 28660858 . - 0 Parent=GSCOCT00024076001 | |
| 12932 chr1 manual_curation gene 28667856 28671705 . + . ID=GSCOCG00024078001;Name=Cc01_g09990 | |
| 12933 chr1 manual_curation mRNA 28667856 28671705 . + . ID=GSCOCT00024078001;Parent=GSCOCG00024078001;Name=Cc01_g09990 | |
| 12934 chr1 manual_curation polypeptide 28668001 28671705 . + . ID=GSCOCP00024078001;Dbxref=InterPro:IPR003386,PANTHER:PTHR11440,PFAM:PF02450,SwissProt:P40345,SwissProt:Q9FNA9,SwissProt:Q9FYC7,TAIR:AT1G04010.1,TAIR:AT3G44830.1,TAIR:AT5G13640.1,TrEMBL:B9MYL5,TrEMBL:F6GW64,TrEMBL:Q6JJ42;Derives_from=GSCOCT00024078001;Name=Cc01_g09990;Ontology_term=CC_evidence_code:ISS,GO:0004607,GO:0006629,CC_EC_number:2.3.1.158,PRODUCT:Putative phospholipid,CC_functional_completeness:complete,CC_gene:PDAT2,CC_gene:PDAT1,CC_gene:LRO1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024078001~ Putative phospholipid:diacylglycerol acyltransferase 2~ PDAT2~ complete;original_location=join(1636886..1636935%2C1636996..1637349%2C1637455..1637677%2C1638264..1638547%2C1638915..1639272%2C1639730..1639983%2C1640110..1640590);owner=coffea | |
| 12935 chr1 manual_curation exon 28667856 28668050 . + . Parent=GSCOCT00024078001 | |
| 12936 chr1 manual_curation exon 28668111 28668464 . + . Parent=GSCOCT00024078001 | |
| 12937 chr1 manual_curation exon 28668570 28668792 . + . Parent=GSCOCT00024078001 | |
| 12938 chr1 manual_curation exon 28669379 28669662 . + . Parent=GSCOCT00024078001 | |
| 12939 chr1 manual_curation exon 28670030 28670387 . + . Parent=GSCOCT00024078001 | |
| 12940 chr1 manual_curation exon 28670845 28671098 . + . Parent=GSCOCT00024078001 | |
| 12941 chr1 manual_curation exon 28671225 28671705 . + . Parent=GSCOCT00024078001 | |
| 12942 chr1 manual_curation CDS 28668001 28668050 . + 0 Parent=GSCOCT00024078001 | |
| 12943 chr1 manual_curation CDS 28668111 28668464 . + 2 Parent=GSCOCT00024078001 | |
| 12944 chr1 manual_curation CDS 28668570 28668792 . + 2 Parent=GSCOCT00024078001 | |
| 12945 chr1 manual_curation CDS 28669379 28669662 . + 0 Parent=GSCOCT00024078001 | |
| 12946 chr1 manual_curation CDS 28670030 28670387 . + 2 Parent=GSCOCT00024078001 | |
| 12947 chr1 manual_curation CDS 28670845 28671098 . + 0 Parent=GSCOCT00024078001 | |
| 12948 chr1 manual_curation CDS 28671225 28671705 . + 2 Parent=GSCOCT00024078001 | |
| 12949 chr1 manual_curation gene 28672723 28673293 . + . ID=GSCOCG00024079001;Name=Cc01_g10000 | |
| 12950 chr1 manual_curation mRNA 28672723 28673293 . + . ID=GSCOCT00024079001;Parent=GSCOCG00024079001;Name=Cc01_g10000 | |
| 12951 chr1 manual_curation polypeptide 28672831 28673031 . + . ID=GSCOCP00024079001;Dbxref=TAIR:AT4G29905.1,TAIR:AT5G10695.1,TAIR:AT5G57123.1,TrEMBL:B9ILF5,TrEMBL:B9T1K2,TrEMBL:I1M9T2;Derives_from=GSCOCT00024079001;Name=Cc01_g10000;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024079001~ unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57123.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ unknown_gene~ complete;original_location=1641716..1641916;owner=coffea | |
| 12952 chr1 manual_curation exon 28672723 28673293 . + . Parent=GSCOCT00024079001 | |
| 12953 chr1 manual_curation CDS 28672831 28673031 . + 0 Parent=GSCOCT00024079001 | |
| 12954 chr1 manual_curation gene 28680528 28684900 . + . ID=GSCOCG00024080001;Name=Cc01_g10010 | |
| 12955 chr1 manual_curation mRNA 28680528 28684900 . + . ID=GSCOCT00024080001;Parent=GSCOCG00024080001;Name=Cc01_g10010 | |
| 12956 chr1 manual_curation polypeptide 28683181 28684828 . + . ID=GSCOCP00024080001;Dbxref=TAIR:AT1G08390.1,TrEMBL:A0A915,TrEMBL:A9PBC2,TrEMBL:D7SN71;Derives_from=GSCOCT00024080001;Name=Cc01_g10010;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B Has 62 Blast hits to 62 proteins in 27 species,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024080001~ unknown protein%3B Has 62 Blast hits to 62 proteins in 27 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 34%3B Fungi - 0%3B Plants - 28%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(1652066..1652191%2C1652295..1652433%2C1652524..1652585%2C1653612..1653713);owner=coffea | |
| 12957 chr1 manual_curation exon 28680528 28680569 . + . Parent=GSCOCT00024080001 | |
| 12958 chr1 manual_curation exon 28683116 28683306 . + . Parent=GSCOCT00024080001 | |
| 12959 chr1 manual_curation exon 28683410 28683548 . + . Parent=GSCOCT00024080001 | |
| 12960 chr1 manual_curation exon 28683639 28683700 . + . Parent=GSCOCT00024080001 | |
| 12961 chr1 manual_curation exon 28684727 28684900 . + . Parent=GSCOCT00024080001 | |
| 12962 chr1 manual_curation CDS 28683181 28683306 . + 0 Parent=GSCOCT00024080001 | |
| 12963 chr1 manual_curation CDS 28683410 28683548 . + 0 Parent=GSCOCT00024080001 | |
| 12964 chr1 manual_curation CDS 28683639 28683700 . + 1 Parent=GSCOCT00024080001 | |
| 12965 chr1 manual_curation CDS 28684727 28684828 . + 0 Parent=GSCOCT00024080001 | |
| 12966 chr1 manual_curation gene 28685321 28692573 . - . ID=GSCOCG00024081001;Name=Cc01_g10020 | |
| 12967 chr1 manual_curation mRNA 28685321 28692573 . - . ID=GSCOCT00024081001;Parent=GSCOCG00024081001;Name=Cc01_g10020 | |
| 12968 chr1 manual_curation polypeptide 28685564 28692443 . - . ID=GSCOCP00024081001;Dbxref=InterPro:IPR016024,SUPERFAMILY:SSF48371,TAIR:AT5G22820.2,TrEMBL:B9SN60,TrEMBL:D7SN73,TrEMBL:I1MS78;Derives_from=GSCOCT00024081001;Name=Cc01_g10020;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:Putative ARM repeat superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024081001~ Putative ARM repeat superfamily protein~ unknown_gene~ complete;original_location=complement(join(1661283..1661328%2C1661035..1661108%2C1659798..1660178%2C1659242..1659307%2C1658951..1659090%2C1658278..1658404%2C1657328..1657479%2C1656763..1656898%2C1655110..1655194%2C1654740..1655011%2C1654449..1654613));owner=coffea | |
| 12969 chr1 manual_curation exon 28685321 28685728 . - . Parent=GSCOCT00024081001 | |
| 12970 chr1 manual_curation exon 28685855 28686126 . - . Parent=GSCOCT00024081001 | |
| 12971 chr1 manual_curation exon 28686225 28686309 . - . Parent=GSCOCT00024081001 | |
| 12972 chr1 manual_curation exon 28687878 28688013 . - . Parent=GSCOCT00024081001 | |
| 12973 chr1 manual_curation exon 28688443 28688594 . - . Parent=GSCOCT00024081001 | |
| 12974 chr1 manual_curation exon 28689393 28689519 . - . Parent=GSCOCT00024081001 | |
| 12975 chr1 manual_curation exon 28690066 28690205 . - . Parent=GSCOCT00024081001 | |
| 12976 chr1 manual_curation exon 28690357 28690422 . - . Parent=GSCOCT00024081001 | |
| 12977 chr1 manual_curation exon 28690913 28691293 . - . Parent=GSCOCT00024081001 | |
| 12978 chr1 manual_curation exon 28692150 28692223 . - . Parent=GSCOCT00024081001 | |
| 12979 chr1 manual_curation exon 28692398 28692573 . - . Parent=GSCOCT00024081001 | |
| 12980 chr1 manual_curation CDS 28685564 28685728 . - 0 Parent=GSCOCT00024081001 | |
| 12981 chr1 manual_curation CDS 28685855 28686126 . - 1 Parent=GSCOCT00024081001 | |
| 12982 chr1 manual_curation CDS 28686225 28686309 . - 0 Parent=GSCOCT00024081001 | |
| 12983 chr1 manual_curation CDS 28687878 28688013 . - 2 Parent=GSCOCT00024081001 | |
| 12984 chr1 manual_curation CDS 28688443 28688594 . - 0 Parent=GSCOCT00024081001 | |
| 12985 chr1 manual_curation CDS 28689393 28689519 . - 2 Parent=GSCOCT00024081001 | |
| 12986 chr1 manual_curation CDS 28690066 28690205 . - 0 Parent=GSCOCT00024081001 | |
| 12987 chr1 manual_curation CDS 28690357 28690422 . - 0 Parent=GSCOCT00024081001 | |
| 12988 chr1 manual_curation CDS 28690913 28691293 . - 0 Parent=GSCOCT00024081001 | |
| 12989 chr1 manual_curation CDS 28692150 28692223 . - 1 Parent=GSCOCT00024081001 | |
| 12990 chr1 manual_curation CDS 28692398 28692443 . - 0 Parent=GSCOCT00024081001 | |
| 12991 chr1 manual_curation gene 28701478 28710866 . + . ID=GSCOCG00024082001;Name=Cc01_g10030 | |
| 12992 chr1 manual_curation mRNA 28701478 28710866 . + . ID=GSCOCT00024082001;Parent=GSCOCG00024082001;Name=Cc01_g10030 | |
| 12993 chr1 manual_curation polypeptide 28701677 28710111 . + . ID=GSCOCP00024082001;Dbxref=InterPro:IPR002523,PFAM:PF01544,SwissProt:B8APK3,SwissProt:Q058N4,SwissProt:Q9AUK4,TAIR:AT1G80900.1,TAIR:AT5G09690.2,TAIR:AT5G22830.1,TrEMBL:D7M1J7,TrEMBL:F6GW66,TrEMBL:I1GPI3;Derives_from=GSCOCT00024082001;Name=Cc01_g10030;Ontology_term=CC_evidence_code:ISS,GO:0016020,GO:0030001,GO:0046873,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Magnesium transporter MRS2-A%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:MRS2-A,CC_gene:MRS2-11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024082001~ Magnesium transporter MRS2-A%2C chloroplastic~ MRS2-A~ fragment;original_location=join(1670562..1670674%2C1670711..1670942%2C1671753..1671825%2C1672240..1672310%2C1672621..1672706%2C1672856..1672946%2C1673550..1673618%2C1673991..1674071%2C1674172..1674337%2C1674458..1674503%2C1675623..1675703%2C1676714..1676796%2C1678750..1678793%2C1678901..1678996);owner=coffea | |
| 12994 chr1 manual_curation exon 28710468 28710866 . + . Parent=GSCOCT00024082001 | |
| 12995 chr1 manual_curation exon 28701478 28701789 . + . Parent=GSCOCT00024082001 | |
| 12996 chr1 manual_curation exon 28701826 28702057 . + . Parent=GSCOCT00024082001 | |
| 12997 chr1 manual_curation exon 28702868 28702940 . + . Parent=GSCOCT00024082001 | |
| 12998 chr1 manual_curation exon 28703355 28703425 . + . Parent=GSCOCT00024082001 | |
| 12999 chr1 manual_curation exon 28703736 28703821 . + . Parent=GSCOCT00024082001 | |
| 13000 chr1 manual_curation exon 28703971 28704061 . + . Parent=GSCOCT00024082001 | |
| 13001 chr1 manual_curation exon 28704665 28704733 . + . Parent=GSCOCT00024082001 | |
| 13002 chr1 manual_curation exon 28705106 28705186 . + . Parent=GSCOCT00024082001 | |
| 13003 chr1 manual_curation exon 28705287 28705452 . + . Parent=GSCOCT00024082001 | |
| 13004 chr1 manual_curation exon 28705573 28705618 . + . Parent=GSCOCT00024082001 | |
| 13005 chr1 manual_curation exon 28706738 28706818 . + . Parent=GSCOCT00024082001 | |
| 13006 chr1 manual_curation exon 28707829 28707911 . + . Parent=GSCOCT00024082001 | |
| 13007 chr1 manual_curation exon 28709865 28709908 . + . Parent=GSCOCT00024082001 | |
| 13008 chr1 manual_curation exon 28710016 28710119 . + . Parent=GSCOCT00024082001 | |
| 13009 chr1 manual_curation CDS 28701677 28701789 . + 0 Parent=GSCOCT00024082001 | |
| 13010 chr1 manual_curation CDS 28701826 28702057 . + 2 Parent=GSCOCT00024082001 | |
| 13011 chr1 manual_curation CDS 28702868 28702940 . + 0 Parent=GSCOCT00024082001 | |
| 13012 chr1 manual_curation CDS 28703355 28703425 . + 1 Parent=GSCOCT00024082001 | |
| 13013 chr1 manual_curation CDS 28703736 28703821 . + 0 Parent=GSCOCT00024082001 | |
| 13014 chr1 manual_curation CDS 28703971 28704061 . + 2 Parent=GSCOCT00024082001 | |
| 13015 chr1 manual_curation CDS 28704665 28704733 . + 0 Parent=GSCOCT00024082001 | |
| 13016 chr1 manual_curation CDS 28705106 28705186 . + 0 Parent=GSCOCT00024082001 | |
| 13017 chr1 manual_curation CDS 28705287 28705452 . + 0 Parent=GSCOCT00024082001 | |
| 13018 chr1 manual_curation CDS 28705573 28705618 . + 1 Parent=GSCOCT00024082001 | |
| 13019 chr1 manual_curation CDS 28706738 28706818 . + 2 Parent=GSCOCT00024082001 | |
| 13020 chr1 manual_curation CDS 28707829 28707911 . + 2 Parent=GSCOCT00024082001 | |
| 13021 chr1 manual_curation CDS 28709865 28709908 . + 1 Parent=GSCOCT00024082001 | |
| 13022 chr1 manual_curation CDS 28710016 28710111 . + 0 Parent=GSCOCT00024082001 | |
| 13023 chr1 manual_curation gene 28711633 28714920 . - . ID=GSCOCG00024083001;Name=Cc01_g10040 | |
| 13024 chr1 manual_curation mRNA 28711633 28714920 . - . ID=GSCOCT00024083001;Parent=GSCOCG00024083001;Name=Cc01_g10040 | |
| 13025 chr1 manual_curation polypeptide 28711903 28714660 . - . ID=GSCOCP00024083001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:P36616,SwissProt:Q9UPE1,SwissProt:Q9Z0G2,TAIR:AT3G44850.1,TAIR:AT3G53030.1,TAIR:AT5G22840.1,TrEMBL:F6GW67,TrEMBL:F6HKF5,TrEMBL:G7I9C7;Derives_from=GSCOCT00024083001;Name=Cc01_g10040;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.12.1,PRODUCT:Putative Protein kinase dsk1,CC_functional_completeness:complete,CC_gene:dsk1,CC_gene:Srpk3,CC_gene:SRPK3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024083001~ Putative Protein kinase dsk1~ dsk1~ complete;original_location=complement(join(1683318..1683545%2C1681797..1682771%2C1681368..1681415%2C1680788..1681204));owner=coffea | |
| 13026 chr1 manual_curation exon 28711633 28712319 . - . Parent=GSCOCT00024083001 | |
| 13027 chr1 manual_curation exon 28712483 28712530 . - . Parent=GSCOCT00024083001 | |
| 13028 chr1 manual_curation exon 28712912 28713886 . - . Parent=GSCOCT00024083001 | |
| 13029 chr1 manual_curation exon 28714433 28714920 . - . Parent=GSCOCT00024083001 | |
| 13030 chr1 manual_curation CDS 28711903 28712319 . - 0 Parent=GSCOCT00024083001 | |
| 13031 chr1 manual_curation CDS 28712483 28712530 . - 0 Parent=GSCOCT00024083001 | |
| 13032 chr1 manual_curation CDS 28712912 28713886 . - 0 Parent=GSCOCT00024083001 | |
| 13033 chr1 manual_curation CDS 28714433 28714660 . - 0 Parent=GSCOCT00024083001 | |
| 13034 chr1 manual_curation gene 28737644 28738951 . - . ID=GSCOCG00024084001;Name=Cc01_g10050 | |
| 13035 chr1 manual_curation mRNA 28737644 28738951 . - . ID=GSCOCT00024084001;Parent=GSCOCG00024084001;Name=Cc01_g10050 | |
| 13036 chr1 manual_curation polypeptide 28737644 28738951 . - . ID=GSCOCP00024084001;Dbxref=InterPro:IPR003480,PFAM:PF02458,SwissProt:A9ZPJ6,SwissProt:A9ZPJ7,SwissProt:Q9FI78,TAIR:AT2G19070.1,TAIR:AT5G48930.1,TAIR:AT5G57840.1,TrEMBL:B9T456,TrEMBL:B9T457,TrEMBL:G9HTF7;Derives_from=GSCOCT00024084001;Name=Cc01_g10050;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.3.1.144,PRODUCT:Agmatine coumaroyltransferase-2,CC_functional_completeness:complete,CC_gene:ACT-2,CC_gene:ACT-1,CC_gene:HCT;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024084001~ Agmatine coumaroyltransferase-2~ ACT-2~ complete;original_location=complement(1706529..1707836);owner=coffea | |
| 13037 chr1 manual_curation exon 28737644 28738951 . - . Parent=GSCOCT00024084001 | |
| 13038 chr1 manual_curation CDS 28737644 28738951 . - 0 Parent=GSCOCT00024084001 | |
| 13039 chr1 manual_curation gene 28754640 28760960 . + . ID=GSCOCG00024085001;Name=Cc01_g10060 | |
| 13040 chr1 manual_curation mRNA 28754640 28760960 . + . ID=GSCOCT00024085001;Parent=GSCOCG00024085001;Name=Cc01_g10060 | |
| 13041 chr1 manual_curation polypeptide 28754803 28760661 . + . ID=GSCOCP00024085001;Dbxref=InterPro:IPR003100,InterPro:IPR003165,InterPro:IPR012337,InterPro:IPR014811,PFAM:PF02170,PFAM:PF02171,PFAM:PF08699,PROFILE:PS50821,PROFILE:PS50822,SUPERFAMILY:SSF53098,SwissProt:Q7XSA2,SwissProt:Q851R2,SwissProt:Q9SJK3,TAIR:AT1G48410.2,TAIR:AT2G27880.1,TAIR:AT5G43810.1,TrEMBL:B9HQS2,TrEMBL:B9SCN8,TrEMBL:D7SN77;Derives_from=GSCOCT00024085001;Name=Cc01_g10060;Ontology_term=CC_evidence_code:ISS,GO:0003676,CC_EC_number:missing_EC_number,PRODUCT:Protein argonaute 5,CC_functional_completeness:complete,CC_gene:AGO5,CC_gene:MEL1,CC_gene:AGO1B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024085001~ Protein argonaute 5~ AGO5~ complete;original_location=join(1723688..1724128%2C1724758..1724957%2C1725038..1725187%2C1725312..1725445%2C1725606..1725712%2C1725924..1726027%2C1726198..1726318%2C1726398..1726514%2C1726648..1726758%2C1726838..1726909%2C1727207..1727320%2C1727408..1727573%2C1727653..1727774%2C1727859..1727996%2C1728097..1728239%2C1728315..1728377%2C1728448..1728511%2C1728602..1728737%2C1728841..1728914%2C1729024..1729118%2C1729247..1729278%2C1729371..1729546);owner=coffea | |
| 13042 chr1 manual_curation exon 28754640 28755243 . + . Parent=GSCOCT00024085001 | |
| 13043 chr1 manual_curation exon 28755873 28756072 . + . Parent=GSCOCT00024085001 | |
| 13044 chr1 manual_curation exon 28756153 28756302 . + . Parent=GSCOCT00024085001 | |
| 13045 chr1 manual_curation exon 28756427 28756560 . + . Parent=GSCOCT00024085001 | |
| 13046 chr1 manual_curation exon 28756721 28756827 . + . Parent=GSCOCT00024085001 | |
| 13047 chr1 manual_curation exon 28757039 28757142 . + . Parent=GSCOCT00024085001 | |
| 13048 chr1 manual_curation exon 28757313 28757433 . + . Parent=GSCOCT00024085001 | |
| 13049 chr1 manual_curation exon 28757513 28757629 . + . Parent=GSCOCT00024085001 | |
| 13050 chr1 manual_curation exon 28757763 28757873 . + . Parent=GSCOCT00024085001 | |
| 13051 chr1 manual_curation exon 28757953 28758024 . + . Parent=GSCOCT00024085001 | |
| 13052 chr1 manual_curation exon 28758322 28758435 . + . Parent=GSCOCT00024085001 | |
| 13053 chr1 manual_curation exon 28758523 28758688 . + . Parent=GSCOCT00024085001 | |
| 13054 chr1 manual_curation exon 28758768 28758889 . + . Parent=GSCOCT00024085001 | |
| 13055 chr1 manual_curation exon 28758974 28759111 . + . Parent=GSCOCT00024085001 | |
| 13056 chr1 manual_curation exon 28759212 28759354 . + . Parent=GSCOCT00024085001 | |
| 13057 chr1 manual_curation exon 28759430 28759492 . + . Parent=GSCOCT00024085001 | |
| 13058 chr1 manual_curation exon 28759563 28759626 . + . Parent=GSCOCT00024085001 | |
| 13059 chr1 manual_curation exon 28759717 28759852 . + . Parent=GSCOCT00024085001 | |
| 13060 chr1 manual_curation exon 28759956 28760029 . + . Parent=GSCOCT00024085001 | |
| 13061 chr1 manual_curation exon 28760139 28760233 . + . Parent=GSCOCT00024085001 | |
| 13062 chr1 manual_curation exon 28760362 28760393 . + . Parent=GSCOCT00024085001 | |
| 13063 chr1 manual_curation exon 28760486 28760960 . + . Parent=GSCOCT00024085001 | |
| 13064 chr1 manual_curation CDS 28754803 28755243 . + 0 Parent=GSCOCT00024085001 | |
| 13065 chr1 manual_curation CDS 28755873 28756072 . + 0 Parent=GSCOCT00024085001 | |
| 13066 chr1 manual_curation CDS 28756153 28756302 . + 2 Parent=GSCOCT00024085001 | |
| 13067 chr1 manual_curation CDS 28756427 28756560 . + 2 Parent=GSCOCT00024085001 | |
| 13068 chr1 manual_curation CDS 28756721 28756827 . + 1 Parent=GSCOCT00024085001 | |
| 13069 chr1 manual_curation CDS 28757039 28757142 . + 0 Parent=GSCOCT00024085001 | |
| 13070 chr1 manual_curation CDS 28757313 28757433 . + 2 Parent=GSCOCT00024085001 | |
| 13071 chr1 manual_curation CDS 28757513 28757629 . + 0 Parent=GSCOCT00024085001 | |
| 13072 chr1 manual_curation CDS 28757763 28757873 . + 0 Parent=GSCOCT00024085001 | |
| 13073 chr1 manual_curation CDS 28757953 28758024 . + 0 Parent=GSCOCT00024085001 | |
| 13074 chr1 manual_curation CDS 28758322 28758435 . + 0 Parent=GSCOCT00024085001 | |
| 13075 chr1 manual_curation CDS 28758523 28758688 . + 0 Parent=GSCOCT00024085001 | |
| 13076 chr1 manual_curation CDS 28758768 28758889 . + 1 Parent=GSCOCT00024085001 | |
| 13077 chr1 manual_curation CDS 28758974 28759111 . + 0 Parent=GSCOCT00024085001 | |
| 13078 chr1 manual_curation CDS 28759212 28759354 . + 0 Parent=GSCOCT00024085001 | |
| 13079 chr1 manual_curation CDS 28759430 28759492 . + 2 Parent=GSCOCT00024085001 | |
| 13080 chr1 manual_curation CDS 28759563 28759626 . + 2 Parent=GSCOCT00024085001 | |
| 13081 chr1 manual_curation CDS 28759717 28759852 . + 0 Parent=GSCOCT00024085001 | |
| 13082 chr1 manual_curation CDS 28759956 28760029 . + 1 Parent=GSCOCT00024085001 | |
| 13083 chr1 manual_curation CDS 28760139 28760233 . + 0 Parent=GSCOCT00024085001 | |
| 13084 chr1 manual_curation CDS 28760362 28760393 . + 2 Parent=GSCOCT00024085001 | |
| 13085 chr1 manual_curation CDS 28760486 28760661 . + 1 Parent=GSCOCT00024085001 | |
| 13086 chr1 manual_curation gene 28765147 28771012 . - . ID=GSCOCG00024086001;Name=Cc01_g10070 | |
| 13087 chr1 manual_curation mRNA 28765147 28771012 . - . ID=GSCOCT00024086001;Parent=GSCOCG00024086001;Name=Cc01_g10070 | |
| 13088 chr1 manual_curation polypeptide 28765419 28770650 . - . ID=GSCOCP00024086001;Dbxref=GENE3D:G3DSA:2.40.70.10,InterPro:IPR001461,InterPro:IPR009007,InterPro:IPR021109,PANTHER:PTHR13683,PFAM:PF00026,PRINTS:PR00792,SUPERFAMILY:SSF50630,SwissProt:A2ZC67,SwissProt:Q766C2,SwissProt:Q9S9K4,TAIR:AT1G08210.1,TAIR:AT2G36670.1,TAIR:AT5G22850.1,TrEMBL:I1LTP6,TrEMBL:I1MS81,TrEMBL:Q9FFC3;Derives_from=GSCOCT00024086001;Name=Cc01_g10070;Ontology_term=CC_evidence_code:ISS,GO:0004190,GO:0006508,CC_EC_number:3.4.23.24,PRODUCT:Putative Aspartic proteinase-like protein 2,CC_functional_completeness:complete,CC_gene:At1g65240,CC_gene:nep2,CC_gene:ASP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024086001~ Putative Aspartic proteinase-like protein 2~ At1g65240~ complete;original_location=complement(join(1739279..1739535%2C1738691..1738820%2C1738337..1738584%2C1738013..1738240%2C1736694..1736856%2C1736455..1736534%2C1736244..1736340%2C1735749..1735815%2C1735206..1735277%2C1734304..1734479));owner=coffea | |
| 13089 chr1 manual_curation exon 28765147 28765594 . - . Parent=GSCOCT00024086001 | |
| 13090 chr1 manual_curation exon 28766321 28766392 . - . Parent=GSCOCT00024086001 | |
| 13091 chr1 manual_curation exon 28766864 28766930 . - . Parent=GSCOCT00024086001 | |
| 13092 chr1 manual_curation exon 28767359 28767455 . - . Parent=GSCOCT00024086001 | |
| 13093 chr1 manual_curation exon 28767570 28767649 . - . Parent=GSCOCT00024086001 | |
| 13094 chr1 manual_curation exon 28767809 28767971 . - . Parent=GSCOCT00024086001 | |
| 13095 chr1 manual_curation exon 28769128 28769355 . - . Parent=GSCOCT00024086001 | |
| 13096 chr1 manual_curation exon 28769452 28769699 . - . Parent=GSCOCT00024086001 | |
| 13097 chr1 manual_curation exon 28769806 28769935 . - . Parent=GSCOCT00024086001 | |
| 13098 chr1 manual_curation exon 28770394 28771012 . - . Parent=GSCOCT00024086001 | |
| 13099 chr1 manual_curation CDS 28765419 28765594 . - 1 Parent=GSCOCT00024086001 | |
| 13100 chr1 manual_curation CDS 28766321 28766392 . - 1 Parent=GSCOCT00024086001 | |
| 13101 chr1 manual_curation CDS 28766864 28766930 . - 0 Parent=GSCOCT00024086001 | |
| 13102 chr1 manual_curation CDS 28767359 28767455 . - 2 Parent=GSCOCT00024086001 | |
| 13103 chr1 manual_curation CDS 28767570 28767649 . - 0 Parent=GSCOCT00024086001 | |
| 13104 chr1 manual_curation CDS 28767809 28767971 . - 2 Parent=GSCOCT00024086001 | |
| 13105 chr1 manual_curation CDS 28769128 28769355 . - 2 Parent=GSCOCT00024086001 | |
| 13106 chr1 manual_curation CDS 28769452 28769699 . - 0 Parent=GSCOCT00024086001 | |
| 13107 chr1 manual_curation CDS 28769806 28769935 . - 2 Parent=GSCOCT00024086001 | |
| 13108 chr1 manual_curation CDS 28770394 28770650 . - 0 Parent=GSCOCT00024086001 | |
| 13109 chr1 manual_curation gene 28786478 28790076 . - . ID=GSCOCG00024088001;Name=Cc01_g10080 | |
| 13110 chr1 manual_curation mRNA 28786478 28790076 . - . ID=GSCOCT00024088001;Parent=GSCOCG00024088001;Name=Cc01_g10080 | |
| 13111 chr1 manual_curation polypeptide 28786478 28789914 . - . ID=GSCOCP00024088001;Dbxref=InterPro:IPR008758,PANTHER:PTHR11010,PFAM:PF05577,SwissProt:P42785,SwissProt:Q5RBU7,SwissProt:Q7TMR0,TAIR:AT2G24280.1,TAIR:AT5G22860.1,TAIR:AT5G65760.1,TrEMBL:A5C9W6,TrEMBL:B9SCN3,TrEMBL:F6GW68;Derives_from=GSCOCT00024088001;Name=Cc01_g10080;Ontology_term=CC_evidence_code:ISS,GO:0006508,GO:0008236,CC_EC_number:3.4.16.2,PRODUCT:Putative Lysosomal Pro-X carboxypeptidase,CC_functional_completeness:complete,CC_gene:PRCP,CC_gene:Prcp;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024088001~ Putative Lysosomal Pro-X carboxypeptidase~ PRCP~ complete;original_location=complement(join(1758386..1758799%2C1758090..1758276%2C1757850..1757983%2C1757632..1757744%2C1756599..1756819%2C1756433..1756482%2C1756122..1756277%2C1755908..1755987%2C1755741..1755790%2C1755363..1755511));owner=coffea | |
| 13112 chr1 manual_curation exon 28786478 28786626 . - . Parent=GSCOCT00024088001 | |
| 13113 chr1 manual_curation exon 28786856 28786905 . - . Parent=GSCOCT00024088001 | |
| 13114 chr1 manual_curation exon 28787023 28787102 . - . Parent=GSCOCT00024088001 | |
| 13115 chr1 manual_curation exon 28787237 28787392 . - . Parent=GSCOCT00024088001 | |
| 13116 chr1 manual_curation exon 28787548 28787597 . - . Parent=GSCOCT00024088001 | |
| 13117 chr1 manual_curation exon 28787714 28787934 . - . Parent=GSCOCT00024088001 | |
| 13118 chr1 manual_curation exon 28788747 28788859 . - . Parent=GSCOCT00024088001 | |
| 13119 chr1 manual_curation exon 28788965 28789098 . - . Parent=GSCOCT00024088001 | |
| 13120 chr1 manual_curation exon 28789205 28789391 . - . Parent=GSCOCT00024088001 | |
| 13121 chr1 manual_curation exon 28789501 28790076 . - . Parent=GSCOCT00024088001 | |
| 13122 chr1 manual_curation CDS 28786478 28786626 . - 1 Parent=GSCOCT00024088001 | |
| 13123 chr1 manual_curation CDS 28786856 28786905 . - 2 Parent=GSCOCT00024088001 | |
| 13124 chr1 manual_curation CDS 28787023 28787102 . - 0 Parent=GSCOCT00024088001 | |
| 13125 chr1 manual_curation CDS 28787237 28787392 . - 0 Parent=GSCOCT00024088001 | |
| 13126 chr1 manual_curation CDS 28787548 28787597 . - 1 Parent=GSCOCT00024088001 | |
| 13127 chr1 manual_curation CDS 28787714 28787934 . - 2 Parent=GSCOCT00024088001 | |
| 13128 chr1 manual_curation CDS 28788747 28788859 . - 0 Parent=GSCOCT00024088001 | |
| 13129 chr1 manual_curation CDS 28788965 28789098 . - 1 Parent=GSCOCT00024088001 | |
| 13130 chr1 manual_curation CDS 28789205 28789391 . - 0 Parent=GSCOCT00024088001 | |
| 13131 chr1 manual_curation CDS 28789501 28789914 . - 0 Parent=GSCOCT00024088001 | |
| 13132 chr1 manual_curation gene 28799503 28802873 . - . ID=GSCOCG00024089001;Name=Cc01_g10090 | |
| 13133 chr1 manual_curation mRNA 28799503 28802873 . - . ID=GSCOCT00024089001;Parent=GSCOCG00024089001;Name=Cc01_g10090 | |
| 13134 chr1 manual_curation polypeptide 28799503 28802873 . - . ID=GSCOCP00024089001;Dbxref=InterPro:IPR008758,PANTHER:PTHR11010,PFAM:PF05577,SwissProt:Q2TA14,SwissProt:Q5RBU7,SwissProt:Q7TMR0,TAIR:AT2G24280.1,TAIR:AT5G22860.1,TAIR:AT5G65760.1,TrEMBL:A5C9W6,TrEMBL:F6GW68,TrEMBL:I1LTP5;Derives_from=GSCOCT00024089001;Name=Cc01_g10090;Ontology_term=CC_evidence_code:ISS,GO:0006508,GO:0008236,CC_EC_number:3.4.16.2,PRODUCT:Putative Lysosomal Pro-X carboxypeptidase,CC_functional_completeness:fragment,CC_gene:Prcp,CC_gene:PRCP;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024089001~ Putative Lysosomal Pro-X carboxypeptidase~ Prcp~ fragment;original_location=complement(join(1771579..1771758%2C1771318..1771495%2C1771050..1771186%2C1770706..1770818%2C1770357..1770608%2C1770050..1770203%2C1768388..1768720));owner=coffea | |
| 13135 chr1 manual_curation exon 28799503 28799835 . - . Parent=GSCOCT00024089001 | |
| 13136 chr1 manual_curation exon 28801165 28801318 . - . Parent=GSCOCT00024089001 | |
| 13137 chr1 manual_curation exon 28801472 28801723 . - . Parent=GSCOCT00024089001 | |
| 13138 chr1 manual_curation exon 28801821 28801933 . - . Parent=GSCOCT00024089001 | |
| 13139 chr1 manual_curation exon 28802165 28802301 . - . Parent=GSCOCT00024089001 | |
| 13140 chr1 manual_curation exon 28802433 28802610 . - . Parent=GSCOCT00024089001 | |
| 13141 chr1 manual_curation exon 28802694 28802873 . - . Parent=GSCOCT00024089001 | |
| 13142 chr1 manual_curation CDS 28799503 28799835 . - 0 Parent=GSCOCT00024089001 | |
| 13143 chr1 manual_curation CDS 28801165 28801318 . - 2 Parent=GSCOCT00024089001 | |
| 13144 chr1 manual_curation CDS 28801472 28801723 . - 2 Parent=GSCOCT00024089001 | |
| 13145 chr1 manual_curation CDS 28801821 28801933 . - 0 Parent=GSCOCT00024089001 | |
| 13146 chr1 manual_curation CDS 28802165 28802301 . - 1 Parent=GSCOCT00024089001 | |
| 13147 chr1 manual_curation CDS 28802433 28802610 . - 0 Parent=GSCOCT00024089001 | |
| 13148 chr1 manual_curation CDS 28802694 28802873 . - 0 Parent=GSCOCT00024089001 | |
| 13149 chr1 manual_curation gene 28804304 28814401 . - . ID=GSCOCG00024090001;Name=Cc01_g10100 | |
| 13150 chr1 manual_curation mRNA 28804304 28814401 . - . ID=GSCOCT00024090001;Parent=GSCOCG00024090001;Name=Cc01_g10100 | |
| 13151 chr1 manual_curation polypeptide 28804845 28814242 . - . ID=GSCOCP00024090001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR000547,InterPro:IPR001680,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR016024,InterPro:IPR016902,InterPro:IPR019781,PFAM:PF00400,PIR:PIRSF028921,SMART:SM00299,SMART:SM00320,SUPERFAMILY:SSF48371,SUPERFAMILY:SSF50978,SwissProt:P49754,SwissProt:P93043,SwissProt:P93231,TAIR:AT1G08190.1,TrEMBL:B9HQR5,TrEMBL:B9SCM9,TrEMBL:D7SN86;Derives_from=GSCOCT00024090001;Name=Cc01_g10100;Ontology_term=CC_evidence_code:ISS,GO:0005488,GO:0005515,GO:0006886,GO:0016192,CC_EC_number:missing_EC_number,PRODUCT:Vacuolar protein sorting-associated protein 41 homolog,CC_functional_completeness:complete,CC_gene:VPS41;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024090001~ Vacuolar protein sorting-associated protein 41 homolog~ VPS41~ complete;original_location=complement(join(1782861..1783127%2C1781855..1782124%2C1781572..1781751%2C1781108..1781368%2C1780187..1780319%2C1779977..1780067%2C1778697..1778799%2C1777579..1777682%2C1777407..1777500%2C1777160..1777315%2C1777025..1777087%2C1776779..1776844%2C1776367..1776567%2C1775722..1775799%2C1775525..1775644%2C1775354..1775434%2C1775150..1775235%2C1774253..1774334%2C1773730..1774167));owner=coffea | |
| 13152 chr1 manual_curation exon 28804304 28805282 . - . Parent=GSCOCT00024090001 | |
| 13153 chr1 manual_curation exon 28805368 28805449 . - . Parent=GSCOCT00024090001 | |
| 13154 chr1 manual_curation exon 28806265 28806350 . - . Parent=GSCOCT00024090001 | |
| 13155 chr1 manual_curation exon 28806469 28806549 . - . Parent=GSCOCT00024090001 | |
| 13156 chr1 manual_curation exon 28806640 28806759 . - . Parent=GSCOCT00024090001 | |
| 13157 chr1 manual_curation exon 28806837 28806914 . - . Parent=GSCOCT00024090001 | |
| 13158 chr1 manual_curation exon 28807482 28807682 . - . Parent=GSCOCT00024090001 | |
| 13159 chr1 manual_curation exon 28807894 28807959 . - . Parent=GSCOCT00024090001 | |
| 13160 chr1 manual_curation exon 28808140 28808202 . - . Parent=GSCOCT00024090001 | |
| 13161 chr1 manual_curation exon 28808275 28808430 . - . Parent=GSCOCT00024090001 | |
| 13162 chr1 manual_curation exon 28808522 28808615 . - . Parent=GSCOCT00024090001 | |
| 13163 chr1 manual_curation exon 28808694 28808797 . - . Parent=GSCOCT00024090001 | |
| 13164 chr1 manual_curation exon 28809812 28809914 . - . Parent=GSCOCT00024090001 | |
| 13165 chr1 manual_curation exon 28811092 28811182 . - . Parent=GSCOCT00024090001 | |
| 13166 chr1 manual_curation exon 28811302 28811434 . - . Parent=GSCOCT00024090001 | |
| 13167 chr1 manual_curation exon 28812223 28812483 . - . Parent=GSCOCT00024090001 | |
| 13168 chr1 manual_curation exon 28812687 28812866 . - . Parent=GSCOCT00024090001 | |
| 13169 chr1 manual_curation exon 28812970 28813239 . - . Parent=GSCOCT00024090001 | |
| 13170 chr1 manual_curation exon 28813976 28814401 . - . Parent=GSCOCT00024090001 | |
| 13171 chr1 manual_curation CDS 28804845 28805282 . - 0 Parent=GSCOCT00024090001 | |
| 13172 chr1 manual_curation CDS 28805368 28805449 . - 2 Parent=GSCOCT00024090001 | |
| 13173 chr1 manual_curation CDS 28806265 28806350 . - 0 Parent=GSCOCT00024090001 | |
| 13174 chr1 manual_curation CDS 28806469 28806549 . - 0 Parent=GSCOCT00024090001 | |
| 13175 chr1 manual_curation CDS 28806640 28806759 . - 0 Parent=GSCOCT00024090001 | |
| 13176 chr1 manual_curation CDS 28806837 28806914 . - 0 Parent=GSCOCT00024090001 | |
| 13177 chr1 manual_curation CDS 28807482 28807682 . - 0 Parent=GSCOCT00024090001 | |
| 13178 chr1 manual_curation CDS 28807894 28807959 . - 0 Parent=GSCOCT00024090001 | |
| 13179 chr1 manual_curation CDS 28808140 28808202 . - 0 Parent=GSCOCT00024090001 | |
| 13180 chr1 manual_curation CDS 28808275 28808430 . - 0 Parent=GSCOCT00024090001 | |
| 13181 chr1 manual_curation CDS 28808522 28808615 . - 2 Parent=GSCOCT00024090001 | |
| 13182 chr1 manual_curation CDS 28808694 28808797 . - 0 Parent=GSCOCT00024090001 | |
| 13183 chr1 manual_curation CDS 28809812 28809914 . - 2 Parent=GSCOCT00024090001 | |
| 13184 chr1 manual_curation CDS 28811092 28811182 . - 1 Parent=GSCOCT00024090001 | |
| 13185 chr1 manual_curation CDS 28811302 28811434 . - 0 Parent=GSCOCT00024090001 | |
| 13186 chr1 manual_curation CDS 28812223 28812483 . - 0 Parent=GSCOCT00024090001 | |
| 13187 chr1 manual_curation CDS 28812687 28812866 . - 0 Parent=GSCOCT00024090001 | |
| 13188 chr1 manual_curation CDS 28812970 28813239 . - 0 Parent=GSCOCT00024090001 | |
| 13189 chr1 manual_curation CDS 28813976 28814242 . - 0 Parent=GSCOCT00024090001 | |
| 13190 chr1 manual_curation gene 28818184 28834083 . + . ID=GSCOCG00024091001;Name=Cc01_g10110 | |
| 13191 chr1 manual_curation mRNA 28818184 28834083 . + . ID=GSCOCT00024091001;Parent=GSCOCG00024091001;Name=Cc01_g10110 | |
| 13192 chr1 manual_curation polypeptide 28818603 28833778 . + . ID=GSCOCP00024091001;Dbxref=InterPro:IPR019514,InterPro:IPR019515,PFAM:PF10474,PFAM:PF10475,SwissProt:Q5ZKV9,SwissProt:Q8CI71,SwissProt:Q96JG6,TAIR:AT2G27900.1,TrEMBL:B9GEV0,TrEMBL:B9SCM8,TrEMBL:I1LRA9;Derives_from=GSCOCT00024091001;Name=Cc01_g10110;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Coiled-coil domain-containing protein 132,CC_functional_completeness:complete,CC_gene:CCDC132,CC_gene:Ccdc132;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024091001~ Putative Coiled-coil domain-containing protein 132~ CCDC132~ complete;original_location=join(1787488..1787580%2C1788906..1789073%2C1790011..1790085%2C1790943..1791021%2C1791422..1791486%2C1791652..1791741%2C1792414..1792503%2C1792643..1792729%2C1792930..1793013%2C1793410..1793529%2C1794360..1794391%2C1794485..1794617%2C1795715..1796287%2C1797074..1797618%2C1797803..1797866%2C1797968..1798070%2C1798248..1798423%2C1799561..1799686%2C1800068..1800138%2C1800363..1800425%2C1801406..1801478%2C1802017..1802136%2C1802230..1802289%2C1802410..1802460%2C1802553..1802663);owner=coffea | |
| 13193 chr1 manual_curation exon 28818184 28818695 . + . Parent=GSCOCT00024091001 | |
| 13194 chr1 manual_curation exon 28820021 28820188 . + . Parent=GSCOCT00024091001 | |
| 13195 chr1 manual_curation exon 28821126 28821200 . + . Parent=GSCOCT00024091001 | |
| 13196 chr1 manual_curation exon 28822058 28822136 . + . Parent=GSCOCT00024091001 | |
| 13197 chr1 manual_curation exon 28822537 28822601 . + . Parent=GSCOCT00024091001 | |
| 13198 chr1 manual_curation exon 28822767 28822856 . + . Parent=GSCOCT00024091001 | |
| 13199 chr1 manual_curation exon 28823529 28823618 . + . Parent=GSCOCT00024091001 | |
| 13200 chr1 manual_curation exon 28823758 28823844 . + . Parent=GSCOCT00024091001 | |
| 13201 chr1 manual_curation exon 28824045 28824128 . + . Parent=GSCOCT00024091001 | |
| 13202 chr1 manual_curation exon 28824525 28824644 . + . Parent=GSCOCT00024091001 | |
| 13203 chr1 manual_curation exon 28825475 28825506 . + . Parent=GSCOCT00024091001 | |
| 13204 chr1 manual_curation exon 28825600 28825732 . + . Parent=GSCOCT00024091001 | |
| 13205 chr1 manual_curation exon 28826830 28827402 . + . Parent=GSCOCT00024091001 | |
| 13206 chr1 manual_curation exon 28828189 28828733 . + . Parent=GSCOCT00024091001 | |
| 13207 chr1 manual_curation exon 28828918 28828981 . + . Parent=GSCOCT00024091001 | |
| 13208 chr1 manual_curation exon 28829083 28829185 . + . Parent=GSCOCT00024091001 | |
| 13209 chr1 manual_curation exon 28829363 28829538 . + . Parent=GSCOCT00024091001 | |
| 13210 chr1 manual_curation exon 28830676 28830801 . + . Parent=GSCOCT00024091001 | |
| 13211 chr1 manual_curation exon 28831183 28831253 . + . Parent=GSCOCT00024091001 | |
| 13212 chr1 manual_curation exon 28831478 28831540 . + . Parent=GSCOCT00024091001 | |
| 13213 chr1 manual_curation exon 28832521 28832593 . + . Parent=GSCOCT00024091001 | |
| 13214 chr1 manual_curation exon 28833132 28833251 . + . Parent=GSCOCT00024091001 | |
| 13215 chr1 manual_curation exon 28833345 28833404 . + . Parent=GSCOCT00024091001 | |
| 13216 chr1 manual_curation exon 28833525 28833575 . + . Parent=GSCOCT00024091001 | |
| 13217 chr1 manual_curation exon 28833668 28834083 . + . Parent=GSCOCT00024091001 | |
| 13218 chr1 manual_curation CDS 28818603 28818695 . + 0 Parent=GSCOCT00024091001 | |
| 13219 chr1 manual_curation CDS 28820021 28820188 . + 0 Parent=GSCOCT00024091001 | |
| 13220 chr1 manual_curation CDS 28821126 28821200 . + 0 Parent=GSCOCT00024091001 | |
| 13221 chr1 manual_curation CDS 28822058 28822136 . + 0 Parent=GSCOCT00024091001 | |
| 13222 chr1 manual_curation CDS 28822537 28822601 . + 1 Parent=GSCOCT00024091001 | |
| 13223 chr1 manual_curation CDS 28822767 28822856 . + 0 Parent=GSCOCT00024091001 | |
| 13224 chr1 manual_curation CDS 28823529 28823618 . + 0 Parent=GSCOCT00024091001 | |
| 13225 chr1 manual_curation CDS 28823758 28823844 . + 0 Parent=GSCOCT00024091001 | |
| 13226 chr1 manual_curation CDS 28824045 28824128 . + 0 Parent=GSCOCT00024091001 | |
| 13227 chr1 manual_curation CDS 28824525 28824644 . + 0 Parent=GSCOCT00024091001 | |
| 13228 chr1 manual_curation CDS 28825475 28825506 . + 0 Parent=GSCOCT00024091001 | |
| 13229 chr1 manual_curation CDS 28825600 28825732 . + 2 Parent=GSCOCT00024091001 | |
| 13230 chr1 manual_curation CDS 28826830 28827402 . + 0 Parent=GSCOCT00024091001 | |
| 13231 chr1 manual_curation CDS 28828189 28828733 . + 0 Parent=GSCOCT00024091001 | |
| 13232 chr1 manual_curation CDS 28828918 28828981 . + 2 Parent=GSCOCT00024091001 | |
| 13233 chr1 manual_curation CDS 28829083 28829185 . + 0 Parent=GSCOCT00024091001 | |
| 13234 chr1 manual_curation CDS 28829363 28829538 . + 1 Parent=GSCOCT00024091001 | |
| 13235 chr1 manual_curation CDS 28830676 28830801 . + 0 Parent=GSCOCT00024091001 | |
| 13236 chr1 manual_curation CDS 28831183 28831253 . + 0 Parent=GSCOCT00024091001 | |
| 13237 chr1 manual_curation CDS 28831478 28831540 . + 2 Parent=GSCOCT00024091001 | |
| 13238 chr1 manual_curation CDS 28832521 28832593 . + 2 Parent=GSCOCT00024091001 | |
| 13239 chr1 manual_curation CDS 28833132 28833251 . + 0 Parent=GSCOCT00024091001 | |
| 13240 chr1 manual_curation CDS 28833345 28833404 . + 0 Parent=GSCOCT00024091001 | |
| 13241 chr1 manual_curation CDS 28833525 28833575 . + 0 Parent=GSCOCT00024091001 | |
| 13242 chr1 manual_curation CDS 28833668 28833778 . + 0 Parent=GSCOCT00024091001 | |
| 13243 chr1 manual_curation gene 28834489 28838599 . - . ID=GSCOCG00024092001;Name=Cc01_g10120 | |
| 13244 chr1 manual_curation mRNA 28834489 28838599 . - . ID=GSCOCT00024092001;Parent=GSCOCG00024092001;Name=Cc01_g10120 | |
| 13245 chr1 manual_curation polypeptide 28834684 28838599 . - . ID=GSCOCP00024092001;Dbxref=InterPro:IPR001563,InterPro:IPR018202,PANTHER:PTHR11802,PFAM:PF00450,PRINTS:PR00724,PROSITE:PS00131,SwissProt:Q67Y83,SwissProt:Q920A5,SwissProt:Q920A6,TAIR:AT2G27920.1,TAIR:AT3G10410.1,TAIR:AT3G45010.1,TrEMBL:A5C816,TrEMBL:I1LRA7,TrEMBL:I1LRA8;Derives_from=GSCOCT00024092001;Name=Cc01_g10120;Ontology_term=CC_evidence_code:ISS,GO:0004185,GO:0006508,CC_EC_number:3.4.16.6,PRODUCT:Serine carboxypeptidase-like 51,CC_functional_completeness:complete,CC_gene:SCPL51,CC_gene:Scpep1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024092001~ Serine carboxypeptidase-like 51~ SCPL51~ complete;original_location=complement(join(1807232..1807484%2C1807028..1807122%2C1806826..1806933%2C1806450..1806690%2C1806318..1806361%2C1806128..1806195%2C1805931..1806036%2C1805615..1805820%2C1805455..1805524%2C1805167..1805217%2C1804847..1804899%2C1804620..1804752%2C1803978..1804051%2C1803569..1803623));owner=coffea | |
| 13246 chr1 manual_curation exon 28834489 28834738 . - . Parent=GSCOCT00024092001 | |
| 13247 chr1 manual_curation exon 28835093 28835166 . - . Parent=GSCOCT00024092001 | |
| 13248 chr1 manual_curation exon 28835735 28835867 . - . Parent=GSCOCT00024092001 | |
| 13249 chr1 manual_curation exon 28835962 28836014 . - . Parent=GSCOCT00024092001 | |
| 13250 chr1 manual_curation exon 28836282 28836332 . - . Parent=GSCOCT00024092001 | |
| 13251 chr1 manual_curation exon 28836570 28836639 . - . Parent=GSCOCT00024092001 | |
| 13252 chr1 manual_curation exon 28836730 28836935 . - . Parent=GSCOCT00024092001 | |
| 13253 chr1 manual_curation exon 28837046 28837151 . - . Parent=GSCOCT00024092001 | |
| 13254 chr1 manual_curation exon 28837243 28837310 . - . Parent=GSCOCT00024092001 | |
| 13255 chr1 manual_curation exon 28837433 28837476 . - . Parent=GSCOCT00024092001 | |
| 13256 chr1 manual_curation exon 28837565 28837805 . - . Parent=GSCOCT00024092001 | |
| 13257 chr1 manual_curation exon 28837941 28838048 . - . Parent=GSCOCT00024092001 | |
| 13258 chr1 manual_curation exon 28838143 28838237 . - . Parent=GSCOCT00024092001 | |
| 13259 chr1 manual_curation exon 28838347 28838599 . - . Parent=GSCOCT00024092001 | |
| 13260 chr1 manual_curation CDS 28834684 28834738 . - 2 Parent=GSCOCT00024092001 | |
| 13261 chr1 manual_curation CDS 28835093 28835166 . - 0 Parent=GSCOCT00024092001 | |
| 13262 chr1 manual_curation CDS 28835735 28835867 . - 2 Parent=GSCOCT00024092001 | |
| 13263 chr1 manual_curation CDS 28835962 28836014 . - 0 Parent=GSCOCT00024092001 | |
| 13264 chr1 manual_curation CDS 28836282 28836332 . - 0 Parent=GSCOCT00024092001 | |
| 13265 chr1 manual_curation CDS 28836570 28836639 . - 2 Parent=GSCOCT00024092001 | |
| 13266 chr1 manual_curation CDS 28836730 28836935 . - 0 Parent=GSCOCT00024092001 | |
| 13267 chr1 manual_curation CDS 28837046 28837151 . - 2 Parent=GSCOCT00024092001 | |
| 13268 chr1 manual_curation CDS 28837243 28837310 . - 0 Parent=GSCOCT00024092001 | |
| 13269 chr1 manual_curation CDS 28837433 28837476 . - 1 Parent=GSCOCT00024092001 | |
| 13270 chr1 manual_curation CDS 28837565 28837805 . - 0 Parent=GSCOCT00024092001 | |
| 13271 chr1 manual_curation CDS 28837941 28838048 . - 0 Parent=GSCOCT00024092001 | |
| 13272 chr1 manual_curation CDS 28838143 28838237 . - 1 Parent=GSCOCT00024092001 | |
| 13273 chr1 manual_curation CDS 28838347 28838599 . - 0 Parent=GSCOCT00024092001 | |
| 13274 chr1 manual_curation gene 28852417 28853700 . + . ID=GSCOCG00024094001;Name=Cc01_g10130 | |
| 13275 chr1 manual_curation mRNA 28852417 28853700 . + . ID=GSCOCT00024094001;Parent=GSCOCG00024094001;Name=Cc01_g10130 | |
| 13276 chr1 manual_curation polypeptide 28852417 28853700 . + . ID=GSCOCP00024094001;Dbxref=GENE3D:G3DSA:1.10.20.10,InterPro:IPR000558,InterPro:IPR007125,InterPro:IPR009072,PANTHER:PTHR23428,PFAM:PF00125,PRINTS:PR00621,SMART:SM00427,SUPERFAMILY:SSF47113,SwissProt:P08994,SwissProt:Q96A08,SwissProt:Q9SGE3,TAIR:AT1G08170.1,TAIR:AT2G28720.1,TAIR:AT5G59910.1,TrEMBL:A5BGU1,TrEMBL:D7SN90,TrEMBL:I1LRA5;Derives_from=GSCOCT00024094001;Name=Cc01_g10130;Ontology_term=CC_evidence_code:ISS,GO:0000786,GO:0003677,GO:0005634,GO:0006334,CC_EC_number:missing_EC_number,PRODUCT:Histone H2B.2,CC_functional_completeness:modules,CC_gene:At1g08170,CC_gene:HIST1H2BA,CC_gene:HTB2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024094001~ Histone H2B.2~ At1g08170~ modules;original_location=join(1821302..1821592%2C1821659..1821803%2C1822149..1822585);owner=coffea | |
| 13277 chr1 manual_curation exon 28852417 28852707 . + . Parent=GSCOCT00024094001 | |
| 13278 chr1 manual_curation exon 28852774 28852918 . + . Parent=GSCOCT00024094001 | |
| 13279 chr1 manual_curation exon 28853264 28853700 . + . Parent=GSCOCT00024094001 | |
| 13280 chr1 manual_curation CDS 28852417 28852707 . + 0 Parent=GSCOCT00024094001 | |
| 13281 chr1 manual_curation CDS 28852774 28852918 . + 0 Parent=GSCOCT00024094001 | |
| 13282 chr1 manual_curation CDS 28853264 28853700 . + 1 Parent=GSCOCT00024094001 | |
| 13283 chr1 manual_curation gene 28858930 28859767 . + . ID=GSCOCG00024095001;Name=Cc01_g10140 | |
| 13284 chr1 manual_curation mRNA 28858930 28859767 . + . ID=GSCOCT00024095001;Parent=GSCOCG00024095001;Name=Cc01_g10140 | |
| 13285 chr1 manual_curation polypeptide 28859133 28859699 . + . ID=GSCOCP00024095001;Dbxref=InterPro:IPR001841,InterPro:IPR018957,PFAM:PF00097,PROFILE:PS50089,SMART:SM00184,SwissProt:Q84W40,SwissProt:Q8RXX9,SwissProt:Q9SJJ7,TAIR:AT1G72200.1,TAIR:AT2G27940.1,TAIR:AT3G05200.1,TrEMBL:B8LN45,TrEMBL:B9SCM2,TrEMBL:D7LIH3;Derives_from=GSCOCT00024095001;Name=Cc01_g10140;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative RING-H2 finger protein ATL57,CC_functional_completeness:fragment,CC_gene:ATL57,CC_gene:ATL11,CC_gene:ATL6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024095001~ Putative RING-H2 finger protein ATL57~ ATL57~ fragment;original_location=1828018..1828584;owner=coffea | |
| 13286 chr1 manual_curation exon 28858930 28859767 . + . Parent=GSCOCT00024095001 | |
| 13287 chr1 manual_curation CDS 28859133 28859699 . + 0 Parent=GSCOCT00024095001 | |
| 13288 chr1 manual_curation gene 28860866 28861654 . + . ID=GSCOCG00024096001;Name=Cc01_g10150 | |
| 13289 chr1 manual_curation mRNA 28860866 28861654 . + . ID=GSCOCT00024096001;Parent=GSCOCG00024096001;Name=Cc01_g10150 | |
| 13290 chr1 manual_curation polypeptide 28861178 28861417 . + . ID=GSCOCP00024096001;Derives_from=GSCOCT00024096001;Name=Cc01_g10150;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024096001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1830063..1830302;owner=coffea | |
| 13291 chr1 manual_curation exon 28860866 28861654 . + . Parent=GSCOCT00024096001 | |
| 13292 chr1 manual_curation CDS 28861178 28861417 . + 0 Parent=GSCOCT00024096001 | |
| 13293 chr1 manual_curation gene 28861707 28866032 . - . ID=GSCOCG00024097001;Name=Cc01_g10160 | |
| 13294 chr1 manual_curation mRNA 28861707 28866032 . - . ID=GSCOCT00024097001;Parent=GSCOCG00024097001;Name=Cc01_g10160 | |
| 13295 chr1 manual_curation polypeptide 28861754 28866032 . - . ID=GSCOCP00024097001;Dbxref=InterPro:IPR001841,PROFILE:PS50089,TAIR:AT2G27950.1,TAIR:AT2G34920.1,TAIR:AT5G04460.1,TrEMBL:F6GW76,TrEMBL:I1LKY4,TrEMBL:I1LRA3;Derives_from=GSCOCT00024097001;Name=Cc01_g10160;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative Ring/U-Box superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024097001~ Putative Ring/U-Box superfamily protein~ unknown_gene~ complete;original_location=complement(join(1834096..1834917%2C1833802..1833920%2C1832140..1833036%2C1831749..1832049%2C1831181..1831349%2C1830921..1831026%2C1830639..1830756));owner=coffea | |
| 13296 chr1 manual_curation exon 28861707 28861871 . - . Parent=GSCOCT00024097001 | |
| 13297 chr1 manual_curation exon 28862036 28862141 . - . Parent=GSCOCT00024097001 | |
| 13298 chr1 manual_curation exon 28862296 28862464 . - . Parent=GSCOCT00024097001 | |
| 13299 chr1 manual_curation exon 28862864 28863164 . - . Parent=GSCOCT00024097001 | |
| 13300 chr1 manual_curation exon 28863255 28864151 . - . Parent=GSCOCT00024097001 | |
| 13301 chr1 manual_curation exon 28864917 28865035 . - . Parent=GSCOCT00024097001 | |
| 13302 chr1 manual_curation exon 28865211 28866032 . - . Parent=GSCOCT00024097001 | |
| 13303 chr1 manual_curation CDS 28861754 28861871 . - 2 Parent=GSCOCT00024097001 | |
| 13304 chr1 manual_curation CDS 28862036 28862141 . - 1 Parent=GSCOCT00024097001 | |
| 13305 chr1 manual_curation CDS 28862296 28862464 . - 0 Parent=GSCOCT00024097001 | |
| 13306 chr1 manual_curation CDS 28862864 28863164 . - 2 Parent=GSCOCT00024097001 | |
| 13307 chr1 manual_curation CDS 28863255 28864151 . - 2 Parent=GSCOCT00024097001 | |
| 13308 chr1 manual_curation CDS 28864917 28865035 . - 0 Parent=GSCOCT00024097001 | |
| 13309 chr1 manual_curation CDS 28865211 28866032 . - 0 Parent=GSCOCT00024097001 | |
| 13310 chr1 manual_curation gene 28872923 28873522 . - . ID=GSCOCG00024099001;Name=Cc01_g10170 | |
| 13311 chr1 manual_curation mRNA 28872923 28873522 . - . ID=GSCOCT00024099001;Parent=GSCOCG00024099001;Name=Cc01_g10170 | |
| 13312 chr1 manual_curation polypeptide 28872923 28873522 . - . ID=GSCOCP00024099001;Dbxref=InterPro:IPR004864,PFAM:PF03168,SwissProt:Q8VZ13,TAIR:AT1G08160.1,TAIR:AT5G06320.1,TAIR:AT5G22870.1,TrEMBL:A5AVL8,TrEMBL:B9HQQ5,TrEMBL:G7IK66;Derives_from=GSCOCT00024099001;Name=Cc01_g10170;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized protein At1g08160,CC_functional_completeness:fragment,CC_gene:At1g08160;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024099001~ Putative Uncharacterized protein At1g08160~ At1g08160~ fragment;original_location=complement(1841808..1842407);owner=coffea | |
| 13313 chr1 manual_curation exon 28872923 28873522 . - . Parent=GSCOCT00024099001 | |
| 13314 chr1 manual_curation CDS 28872923 28873522 . - 0 Parent=GSCOCT00024099001 | |
| 13315 chr1 manual_curation gene 28877569 28878313 . + . ID=GSCOCG00024100001;Name=Cc01_g10180 | |
| 13316 chr1 manual_curation mRNA 28877569 28878313 . + . ID=GSCOCT00024100001;Parent=GSCOCG00024100001;Name=Cc01_g10180 | |
| 13317 chr1 manual_curation polypeptide 28878065 28878313 . + . ID=GSCOCP00024100001;Derives_from=GSCOCT00024100001;Name=Cc01_g10180;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024100001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1846950..1847198;owner=coffea | |
| 13318 chr1 manual_curation exon 28877569 28878313 . + . Parent=GSCOCT00024100001 | |
| 13319 chr1 manual_curation CDS 28878065 28878313 . + 0 Parent=GSCOCT00024100001 | |
| 13320 chr1 manual_curation gene 28885407 28893822 . + . ID=GSCOCG00024101001;Name=Cc01_g10190 | |
| 13321 chr1 manual_curation mRNA 28885407 28893822 . + . ID=GSCOCT00024101001;Parent=GSCOCG00024101001;Name=Cc01_g10190 | |
| 13322 chr1 manual_curation polypeptide 28885819 28893411 . + . ID=GSCOCP00024101001;Dbxref=InterPro:IPR001965,InterPro:IPR011011,InterPro:IPR019786,InterPro:IPR019787,PFAM:PF00628,PROFILE:PS50016,PROSITE:PS01359,SMART:SM00249,SUPERFAMILY:SSF57903,SwissProt:Q6PDQ2,TAIR:AT2G27980.1,TAIR:AT2G36720.1,TAIR:AT2G37520.1,TrEMBL:B9SCL9,TrEMBL:D7SN93,TrEMBL:Q6JJ55;Derives_from=GSCOCT00024101001;Name=Cc01_g10190;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain,CC_functional_completeness:modules,CC_gene:Chd4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024101001~ Putative Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain~ Chd4~ modules;original_location=join(1854704..1855210%2C1855424..1855648%2C1855745..1855831%2C1855922..1856117%2C1856210..1856315%2C1857006..1857098%2C1857288..1857369%2C1857550..1857609%2C1857799..1857851%2C1858050..1858216%2C1858552..1858762%2C1859553..1859610%2C1859717..1859773%2C1860708..1860941%2C1861477..1861541%2C1861633..1861689%2C1861766..1861868%2C1861966..1862106%2C1862201..1862296);owner=coffea | |
| 13323 chr1 manual_curation exon 28885407 28886325 . + . Parent=GSCOCT00024101001 | |
| 13324 chr1 manual_curation exon 28886539 28886763 . + . Parent=GSCOCT00024101001 | |
| 13325 chr1 manual_curation exon 28886860 28886946 . + . Parent=GSCOCT00024101001 | |
| 13326 chr1 manual_curation exon 28887037 28887232 . + . Parent=GSCOCT00024101001 | |
| 13327 chr1 manual_curation exon 28887325 28887430 . + . Parent=GSCOCT00024101001 | |
| 13328 chr1 manual_curation exon 28888121 28888213 . + . Parent=GSCOCT00024101001 | |
| 13329 chr1 manual_curation exon 28888403 28888484 . + . Parent=GSCOCT00024101001 | |
| 13330 chr1 manual_curation exon 28888665 28888724 . + . Parent=GSCOCT00024101001 | |
| 13331 chr1 manual_curation exon 28888914 28888966 . + . Parent=GSCOCT00024101001 | |
| 13332 chr1 manual_curation exon 28889165 28889331 . + . Parent=GSCOCT00024101001 | |
| 13333 chr1 manual_curation exon 28889667 28889877 . + . Parent=GSCOCT00024101001 | |
| 13334 chr1 manual_curation exon 28890668 28890725 . + . Parent=GSCOCT00024101001 | |
| 13335 chr1 manual_curation exon 28890832 28890888 . + . Parent=GSCOCT00024101001 | |
| 13336 chr1 manual_curation exon 28891823 28892056 . + . Parent=GSCOCT00024101001 | |
| 13337 chr1 manual_curation exon 28892592 28892656 . + . Parent=GSCOCT00024101001 | |
| 13338 chr1 manual_curation exon 28892748 28892804 . + . Parent=GSCOCT00024101001 | |
| 13339 chr1 manual_curation exon 28892881 28892983 . + . Parent=GSCOCT00024101001 | |
| 13340 chr1 manual_curation exon 28893081 28893221 . + . Parent=GSCOCT00024101001 | |
| 13341 chr1 manual_curation exon 28893316 28893822 . + . Parent=GSCOCT00024101001 | |
| 13342 chr1 manual_curation CDS 28885819 28886325 . + 0 Parent=GSCOCT00024101001 | |
| 13343 chr1 manual_curation CDS 28886539 28886763 . + 0 Parent=GSCOCT00024101001 | |
| 13344 chr1 manual_curation CDS 28886860 28886946 . + 0 Parent=GSCOCT00024101001 | |
| 13345 chr1 manual_curation CDS 28887037 28887232 . + 0 Parent=GSCOCT00024101001 | |
| 13346 chr1 manual_curation CDS 28887325 28887430 . + 1 Parent=GSCOCT00024101001 | |
| 13347 chr1 manual_curation CDS 28888121 28888213 . + 2 Parent=GSCOCT00024101001 | |
| 13348 chr1 manual_curation CDS 28888403 28888484 . + 2 Parent=GSCOCT00024101001 | |
| 13349 chr1 manual_curation CDS 28888665 28888724 . + 0 Parent=GSCOCT00024101001 | |
| 13350 chr1 manual_curation CDS 28888914 28888966 . + 0 Parent=GSCOCT00024101001 | |
| 13351 chr1 manual_curation CDS 28889165 28889331 . + 2 Parent=GSCOCT00024101001 | |
| 13352 chr1 manual_curation CDS 28889667 28889877 . + 1 Parent=GSCOCT00024101001 | |
| 13353 chr1 manual_curation CDS 28890668 28890725 . + 2 Parent=GSCOCT00024101001 | |
| 13354 chr1 manual_curation CDS 28890832 28890888 . + 0 Parent=GSCOCT00024101001 | |
| 13355 chr1 manual_curation CDS 28891823 28892056 . + 0 Parent=GSCOCT00024101001 | |
| 13356 chr1 manual_curation CDS 28892592 28892656 . + 0 Parent=GSCOCT00024101001 | |
| 13357 chr1 manual_curation CDS 28892748 28892804 . + 2 Parent=GSCOCT00024101001 | |
| 13358 chr1 manual_curation CDS 28892881 28892983 . + 2 Parent=GSCOCT00024101001 | |
| 13359 chr1 manual_curation CDS 28893081 28893221 . + 0 Parent=GSCOCT00024101001 | |
| 13360 chr1 manual_curation CDS 28893316 28893411 . + 0 Parent=GSCOCT00024101001 | |
| 13361 chr1 manual_curation gene 28895965 28897655 . + . ID=GSCOCG00024102001;Name=Cc01_g10200 | |
| 13362 chr1 manual_curation mRNA 28895965 28897655 . + . ID=GSCOCT00024102001;Parent=GSCOCG00024102001;Name=Cc01_g10200 | |
| 13363 chr1 manual_curation polypeptide 28896248 28897230 . + . ID=GSCOCP00024102001;Dbxref=GENE3D:G3DSA:3.30.170.10,InterPro:IPR000789,PFAM:PF01111,PRINTS:PR00296,PROSITE:PS00944,SUPERFAMILY:SSF55637,SwissProt:P33552,SwissProt:P55933,SwissProt:P56390,SwissProt:Q24152,TrEMBL:G7JM76;Derives_from=GSCOCT00024102001;Name=Cc01_g10200;Ontology_term=CC_evidence_code:ISS,GO:0007049,GO:0016538,CC_EC_number:missing_EC_number,PRODUCT:Cyclin-dependent kinases regulatory subunit 2,CC_functional_completeness:complete,CC_gene:CKS2,CC_gene:CKS1,CC_gene:Cks2,CC_gene:Cks30A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024102001~ Cyclin-dependent kinases regulatory subunit 2~ CKS2~ complete;original_location=join(1865133..1865185%2C1865299..1865359%2C1865963..1866115);owner=coffea | |
| 13364 chr1 manual_curation exon 28895965 28896109 . + . Parent=GSCOCT00024102001 | |
| 13365 chr1 manual_curation exon 28896198 28896300 . + . Parent=GSCOCT00024102001 | |
| 13366 chr1 manual_curation exon 28896414 28896474 . + . Parent=GSCOCT00024102001 | |
| 13367 chr1 manual_curation exon 28897078 28897655 . + . Parent=GSCOCT00024102001 | |
| 13368 chr1 manual_curation CDS 28896248 28896300 . + 0 Parent=GSCOCT00024102001 | |
| 13369 chr1 manual_curation CDS 28896414 28896474 . + 2 Parent=GSCOCT00024102001 | |
| 13370 chr1 manual_curation CDS 28897078 28897230 . + 0 Parent=GSCOCT00024102001 | |
| 13371 chr1 manual_curation gene 28899980 28901632 . + . ID=GSCOCG00024104001;Name=Cc01_g10210 | |
| 13372 chr1 manual_curation mRNA 28899980 28901632 . + . ID=GSCOCT00024104001;Parent=GSCOCG00024104001;Name=Cc01_g10210 | |
| 13373 chr1 manual_curation polypeptide 28900959 28901312 . + . ID=GSCOCP00024104001;Dbxref=TAIR:AT5G22875.1,TrEMBL:G7JM87,TrEMBL:Q6JJ60,TrEMBL:Q8LBZ1;Derives_from=GSCOCT00024104001;Name=Cc01_g10210;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024104001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(1869844..1869926%2C1870062..1870197);owner=coffea | |
| 13374 chr1 manual_curation exon 28899980 28901041 . + . Parent=GSCOCT00024104001 | |
| 13375 chr1 manual_curation exon 28901177 28901632 . + . Parent=GSCOCT00024104001 | |
| 13376 chr1 manual_curation CDS 28900959 28901041 . + 0 Parent=GSCOCT00024104001 | |
| 13377 chr1 manual_curation CDS 28901177 28901312 . + 2 Parent=GSCOCT00024104001 | |
| 13378 chr1 manual_curation gene 28903326 28908595 . + . ID=GSCOCG00024105001;Name=Cc01_g10220 | |
| 13379 chr1 manual_curation mRNA 28903326 28908595 . + . ID=GSCOCT00024105001;Parent=GSCOCG00024105001;Name=Cc01_g10220 | |
| 13380 chr1 manual_curation polypeptide 28903662 28908347 . + . ID=GSCOCP00024105001;Dbxref=GENE3D:G3DSA:2.102.10.10,InterPro:IPR013626,InterPro:IPR017941,PFAM:PF00355,PFAM:PF08417,PROFILE:PS51296,SUPERFAMILY:SSF50022,SwissProt:O49931,SwissProt:Q8W496,SwissProt:Q9FYC2,TAIR:AT2G24820.1,TAIR:AT3G44880.1,TAIR:AT4G25650.2,TrEMBL:A9YTW3,TrEMBL:A9YTW4,TrEMBL:Q8W5A3;Derives_from=GSCOCT00024105001;Name=Cc01_g10220;Ontology_term=CC_evidence_code:ISS,GO:0010277,GO:0016491,GO:0055114,CC_EC_number:missing_EC_number,CC_EC_number:missing_EC_number,PRODUCT:Pheophorbide a oxygenase%2C chloroplastic,CC_functional_completeness:complete,CC_gene:PAO,CC_gene:PTC52,CC_gene:TIC55;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024105001~ Pheophorbide a oxygenase%2C chloroplastic~ PAO~ complete;original_location=join(1872547..1872987%2C1873095..1873330%2C1873533..1873659%2C1874766..1874902%2C1875275..1875434%2C1876367..1876645%2C1876978..1877232);owner=coffea | |
| 13381 chr1 manual_curation exon 28903326 28904102 . + . Parent=GSCOCT00024105001 | |
| 13382 chr1 manual_curation exon 28904210 28904445 . + . Parent=GSCOCT00024105001 | |
| 13383 chr1 manual_curation exon 28904648 28904774 . + . Parent=GSCOCT00024105001 | |
| 13384 chr1 manual_curation exon 28905881 28906017 . + . Parent=GSCOCT00024105001 | |
| 13385 chr1 manual_curation exon 28906390 28906549 . + . Parent=GSCOCT00024105001 | |
| 13386 chr1 manual_curation exon 28907482 28907760 . + . Parent=GSCOCT00024105001 | |
| 13387 chr1 manual_curation exon 28908093 28908595 . + . Parent=GSCOCT00024105001 | |
| 13388 chr1 manual_curation CDS 28903662 28904102 . + 0 Parent=GSCOCT00024105001 | |
| 13389 chr1 manual_curation CDS 28904210 28904445 . + 0 Parent=GSCOCT00024105001 | |
| 13390 chr1 manual_curation CDS 28904648 28904774 . + 2 Parent=GSCOCT00024105001 | |
| 13391 chr1 manual_curation CDS 28905881 28906017 . + 0 Parent=GSCOCT00024105001 | |
| 13392 chr1 manual_curation CDS 28906390 28906549 . + 2 Parent=GSCOCT00024105001 | |
| 13393 chr1 manual_curation CDS 28907482 28907760 . + 0 Parent=GSCOCT00024105001 | |
| 13394 chr1 manual_curation CDS 28908093 28908347 . + 0 Parent=GSCOCT00024105001 | |
| 13395 chr1 manual_curation gene 28909061 28909507 . - . ID=GSCOCG00024106001;Name=Cc01_g10230 | |
| 13396 chr1 manual_curation mRNA 28909061 28909507 . - . ID=GSCOCT00024106001;Parent=GSCOCG00024106001;Name=Cc01_g10230 | |
| 13397 chr1 manual_curation polypeptide 28909061 28909507 . - . ID=GSCOCP00024106001;Dbxref=GENE3D:G3DSA:1.10.20.10,InterPro:IPR000558,InterPro:IPR007125,InterPro:IPR009072,PANTHER:PTHR23428,PFAM:PF00125,PRINTS:PR00621,PROSITE:PS00357,SMART:SM00427,SUPERFAMILY:SSF47113,SwissProt:O23629,SwissProt:P93354,SwissProt:Q1S9I9,TAIR:AT1G07790.1,TAIR:AT2G28720.1,TAIR:AT3G45980.1,TrEMBL:A9PJR3,TrEMBL:B9GV78,TrEMBL:G7JTQ9;Derives_from=GSCOCT00024106001;Name=Cc01_g10230;Ontology_term=CC_evidence_code:ISS,GO:0000786,GO:0003677,GO:0005634,GO:0006334,CC_EC_number:missing_EC_number,PRODUCT:Histone H2B,CC_functional_completeness:complete,CC_gene:HIS2B,CC_gene:H2B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024106001~ Histone H2B~ HIS2B~ complete;original_location=complement(1877946..1878392);owner=coffea | |
| 13398 chr1 manual_curation exon 28909061 28909507 . - . Parent=GSCOCT00024106001 | |
| 13399 chr1 manual_curation CDS 28909061 28909507 . - 0 Parent=GSCOCT00024106001 | |
| 13400 chr1 manual_curation gene 28913508 28914812 . - . ID=GSCOCG00024107001;Name=Cc01_g10240 | |
| 13401 chr1 manual_curation mRNA 28913508 28914812 . - . ID=GSCOCT00024107001;Parent=GSCOCG00024107001;Name=Cc01_g10240 | |
| 13402 chr1 manual_curation polypeptide 28913508 28914812 . - . ID=GSCOCP00024107001;Dbxref=InterPro:IPR007087,InterPro:IPR015880,PFAM:PF00096,PROFILE:PS50157,PROSITE:PS00028,SMART:SM00355,SwissProt:Q2QX40,SwissProt:Q943I6,SwissProt:Q9C8N5,TAIR:AT1G03840.1,TAIR:AT1G34370.2,TAIR:AT5G22890.1,TrEMBL:A5AHN7,TrEMBL:B9SCL3,TrEMBL:F6GW79;Derives_from=GSCOCT00024107001;Name=Cc01_g10240;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein SENSITIVE TO PROTON RHIZOTOXICITY 1,CC_functional_completeness:fragment,CC_gene:STOP1,CC_gene:Os01g0871200,CC_gene:STAR3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024107001~ Putative Protein SENSITIVE TO PROTON RHIZOTOXICITY 1~ STOP1~ fragment;original_location=complement(join(1883328..1883697%2C1882393..1883201));owner=coffea | |
| 13403 chr1 manual_curation exon 28913508 28914316 . - . Parent=GSCOCT00024107001 | |
| 13404 chr1 manual_curation exon 28914443 28914812 . - . Parent=GSCOCT00024107001 | |
| 13405 chr1 manual_curation CDS 28913508 28914316 . - 1 Parent=GSCOCT00024107001 | |
| 13406 chr1 manual_curation CDS 28914443 28914812 . - 0 Parent=GSCOCT00024107001 | |
| 13407 chr1 manual_curation gene 28923218 28926434 . + . ID=GSCOCG00024108001;Name=Cc01_g10250 | |
| 13408 chr1 manual_curation mRNA 28923218 28926434 . + . ID=GSCOCT00024108001;Parent=GSCOCG00024108001;Name=Cc01_g10250 | |
| 13409 chr1 manual_curation polypeptide 28923291 28925973 . + . ID=GSCOCP00024108001;Dbxref=GENE3D:G3DSA:3.10.430.100,GENE3D:G3DSA:3.40.5.10,HAMAP:MF_00503,InterPro:IPR000244,InterPro:IPR009027,InterPro:IPR020069,InterPro:IPR020070,InterPro:IPR020594,PANTHER:PTHR21368,PFAM:PF01281,PFAM:PF03948,PROSITE:PS00651,SUPERFAMILY:SSF55653,SUPERFAMILY:SSF55658,SwissProt:P11894,SwissProt:P25864,SwissProt:Q8L803,TAIR:AT3G44890.1,TIGRFAMs:TIGR00158,TrEMBL:A9PI62,TrEMBL:C6T1L0,TrEMBL:D7LNI8;Derives_from=GSCOCT00024108001;Name=Cc01_g10250;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:50S ribosomal protein L9%2C chloroplastic,CC_functional_completeness:complete,CC_gene:RPL9;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024108001~ 50S ribosomal protein L9%2C chloroplastic~ RPL9~ complete;original_location=join(1892176..1892331%2C1892475..1892602%2C1893758..1893803%2C1894347..1894444%2C1894517..1894564%2C1894738..1894858);owner=coffea | |
| 13410 chr1 manual_curation exon 28923218 28923446 . + . Parent=GSCOCT00024108001 | |
| 13411 chr1 manual_curation exon 28923590 28923717 . + . Parent=GSCOCT00024108001 | |
| 13412 chr1 manual_curation exon 28924873 28924918 . + . Parent=GSCOCT00024108001 | |
| 13413 chr1 manual_curation exon 28925462 28925559 . + . Parent=GSCOCT00024108001 | |
| 13414 chr1 manual_curation exon 28925632 28925679 . + . Parent=GSCOCT00024108001 | |
| 13415 chr1 manual_curation exon 28925853 28926434 . + . Parent=GSCOCT00024108001 | |
| 13416 chr1 manual_curation CDS 28923291 28923446 . + 0 Parent=GSCOCT00024108001 | |
| 13417 chr1 manual_curation CDS 28923590 28923717 . + 0 Parent=GSCOCT00024108001 | |
| 13418 chr1 manual_curation CDS 28924873 28924918 . + 2 Parent=GSCOCT00024108001 | |
| 13419 chr1 manual_curation CDS 28925462 28925559 . + 0 Parent=GSCOCT00024108001 | |
| 13420 chr1 manual_curation CDS 28925632 28925679 . + 2 Parent=GSCOCT00024108001 | |
| 13421 chr1 manual_curation CDS 28925853 28925973 . + 2 Parent=GSCOCT00024108001 | |
| 13422 chr1 manual_curation gene 28933028 28934035 . - . ID=GSCOCG00024109001;Name=Cc01_g10260 | |
| 13423 chr1 manual_curation mRNA 28933028 28934035 . - . ID=GSCOCT00024109001;Parent=GSCOCG00024109001;Name=Cc01_g10260 | |
| 13424 chr1 manual_curation polypeptide 28933028 28934035 . - . ID=GSCOCP00024109001;Dbxref=InterPro:IPR007087,InterPro:IPR015880,PROFILE:PS50157,PROSITE:PS00028,SMART:SM00355,SwissProt:Q681X4,TAIR:AT2G28200.1,TAIR:AT5G03510.1,TAIR:AT5G04390.1,TrEMBL:A9PFN0,TrEMBL:B9HQP7,TrEMBL:F6GW81;Derives_from=GSCOCT00024109001;Name=Cc01_g10260;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative C2H2-type zinc finger family protein,CC_functional_completeness:complete,CC_gene:ZAT5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024109001~ Putative C2H2-type zinc finger family protein~ ZAT5~ complete;original_location=complement(1901913..1902920);owner=coffea | |
| 13425 chr1 manual_curation exon 28933028 28934035 . - . Parent=GSCOCT00024109001 | |
| 13426 chr1 manual_curation CDS 28933028 28934035 . - 0 Parent=GSCOCT00024109001 | |
| 13427 chr1 manual_curation gene 28942206 28943616 . - . ID=GSCOCG00024112001;Name=Cc01_g10270 | |
| 13428 chr1 manual_curation mRNA 28942206 28943616 . - . ID=GSCOCT00024112001;Parent=GSCOCG00024112001;Name=Cc01_g10270 | |
| 13429 chr1 manual_curation polypeptide 28943287 28943616 . - . ID=GSCOCP00024112001;Derives_from=GSCOCT00024112001;Name=Cc01_g10270;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024112001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(1912172..1912501);owner=coffea | |
| 13430 chr1 manual_curation exon 28942206 28943616 . - . Parent=GSCOCT00024112001 | |
| 13431 chr1 manual_curation CDS 28943287 28943616 . - 0 Parent=GSCOCT00024112001 | |
| 13432 chr1 manual_curation gene 28943734 28946917 . - . ID=GSCOCG00024113001;Name=Cc01_g10280 | |
| 13433 chr1 manual_curation mRNA 28943734 28946917 . - . ID=GSCOCT00024113001;Parent=GSCOCG00024113001;Name=Cc01_g10280 | |
| 13434 chr1 manual_curation polypeptide 28945036 28946610 . - . ID=GSCOCP00024113001;Dbxref=GENE3D:G3DSA:2.60.40.200,InterPro:IPR001424,InterPro:IPR018152,PANTHER:PTHR10003,PFAM:PF00080,PRINTS:PR00068,PROSITE:PS00087,SUPERFAMILY:SSF49329,SwissProt:O04997,SwissProt:O65199,SwissProt:P10792,TAIR:AT1G08830.1,TAIR:AT2G28190.1,TAIR:AT5G18100.1,TrEMBL:A9PJW9,TrEMBL:B9N874,TrEMBL:G3E253;Derives_from=GSCOCT00024113001;Name=Cc01_g10280;Ontology_term=CC_evidence_code:ISS,GO:0006801,GO:0046872,GO:0055114,CC_EC_number:1.15.1.1,PRODUCT:Superoxide dismutase [Cu-Zn]%2C chloroplastic,CC_functional_completeness:modules,CC_gene:SODCP;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024113001~ Superoxide dismutase [Cu-Zn]%2C chloroplastic~ SODCP~ modules;original_location=complement(join(1915166..1915495%2C1915011..1915050%2C1914806..1914901%2C1914451..1914482%2C1914282..1914357%2C1913921..1914132));owner=coffea | |
| 13435 chr1 manual_curation exon 28943734 28945247 . - . Parent=GSCOCT00024113001 | |
| 13436 chr1 manual_curation exon 28945397 28945472 . - . Parent=GSCOCT00024113001 | |
| 13437 chr1 manual_curation exon 28945566 28945597 . - . Parent=GSCOCT00024113001 | |
| 13438 chr1 manual_curation exon 28945921 28946016 . - . Parent=GSCOCT00024113001 | |
| 13439 chr1 manual_curation exon 28946126 28946165 . - . Parent=GSCOCT00024113001 | |
| 13440 chr1 manual_curation exon 28946281 28946917 . - . Parent=GSCOCT00024113001 | |
| 13441 chr1 manual_curation CDS 28945036 28945247 . - 1 Parent=GSCOCT00024113001 | |
| 13442 chr1 manual_curation CDS 28945397 28945472 . - 0 Parent=GSCOCT00024113001 | |
| 13443 chr1 manual_curation CDS 28945566 28945597 . - 1 Parent=GSCOCT00024113001 | |
| 13444 chr1 manual_curation CDS 28945921 28946016 . - 1 Parent=GSCOCT00024113001 | |
| 13445 chr1 manual_curation CDS 28946126 28946165 . - 0 Parent=GSCOCT00024113001 | |
| 13446 chr1 manual_curation CDS 28946281 28946610 . - 0 Parent=GSCOCT00024113001 | |
| 13447 chr1 manual_curation gene 28955161 28963794 . + . ID=GSCOCG00024116001;Name=Cc01_g10290 | |
| 13448 chr1 manual_curation mRNA 28955161 28963794 . + . ID=GSCOCT00024116001;Parent=GSCOCG00024116001;Name=Cc01_g10290 | |
| 13449 chr1 manual_curation polypeptide 28955387 28961816 . + . ID=GSCOCP00024116001;Dbxref=InterPro:IPR019354,PFAM:PF10220,SwissProt:A1A4J7,SwissProt:Q0VA04,SwissProt:Q8VE18,TrEMBL:A5B1Y7,TrEMBL:B9SCK8,TrEMBL:F6GW82;Derives_from=GSCOCT00024116001;Name=Cc01_g10290;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:SMG8,CC_gene:Smg8,CC_gene:smg8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024116001~ Putative uncharacterized protein~ SMG8~ complete;original_location=join(1924272..1924773%2C1926028..1926865%2C1927051..1929127%2C1929839..1929892%2C1930444..1930701);owner=coffea | |
| 13450 chr1 manual_curation exon 28962742 28962847 . + . Parent=GSCOCT00024116001 | |
| 13451 chr1 manual_curation exon 28963400 28963522 . + . Parent=GSCOCT00024116001 | |
| 13452 chr1 manual_curation exon 28963606 28963794 . + . Parent=GSCOCT00024116001 | |
| 13453 chr1 manual_curation exon 28955161 28955888 . + . Parent=GSCOCT00024116001 | |
| 13454 chr1 manual_curation exon 28957143 28957980 . + . Parent=GSCOCT00024116001 | |
| 13455 chr1 manual_curation exon 28958166 28960242 . + . Parent=GSCOCT00024116001 | |
| 13456 chr1 manual_curation exon 28960954 28961007 . + . Parent=GSCOCT00024116001 | |
| 13457 chr1 manual_curation exon 28961559 28961907 . + . Parent=GSCOCT00024116001 | |
| 13458 chr1 manual_curation CDS 28955387 28955888 . + 0 Parent=GSCOCT00024116001 | |
| 13459 chr1 manual_curation CDS 28957143 28957980 . + 1 Parent=GSCOCT00024116001 | |
| 13460 chr1 manual_curation CDS 28958166 28960242 . + 2 Parent=GSCOCT00024116001 | |
| 13461 chr1 manual_curation CDS 28960954 28961007 . + 0 Parent=GSCOCT00024116001 | |
| 13462 chr1 manual_curation CDS 28961559 28961816 . + 0 Parent=GSCOCT00024116001 | |
| 13463 chr1 manual_curation gene 28971656 28973472 . + . ID=GSCOCG00024117001;Name=Cc01_g10300 | |
| 13464 chr1 manual_curation mRNA 28971656 28973472 . + . ID=GSCOCT00024117001;Parent=GSCOCG00024117001;Name=Cc01_g10300 | |
| 13465 chr1 manual_curation polypeptide 28971849 28973231 . + . ID=GSCOCP00024117001;Dbxref=GENE3D:G3DSA:1.20.1080.10,InterPro:IPR000425,InterPro:IPR012269,InterPro:IPR022357,PANTHER:PTHR19139,PFAM:PF00230,PRINTS:PR00783,PROSITE:PS00221,SUPERFAMILY:SSF81338,SwissProt:O64964,SwissProt:O82598,SwissProt:P50156,TAIR:AT2G36830.1,TAIR:AT3G26520.1,TAIR:AT4G01470.1,TIGRFAMs:TIGR00861,TrEMBL:A9CTP9,TrEMBL:F6HKC8,TrEMBL:F6KSK1;Derives_from=GSCOCT00024117001;Name=Cc01_g10300;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006810,GO:0016020,GO:0016021,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Aquaporin TIP1-1,CC_functional_completeness:complete,CC_gene:TIP1-1,CC_gene:TIP1-3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024117001~ Aquaporin TIP1-1~ TIP1-1~ complete;original_location=join(1940734..1941135%2C1941745..1942116);owner=coffea | |
| 13466 chr1 manual_curation exon 28971656 28972250 . + . Parent=GSCOCT00024117001 | |
| 13467 chr1 manual_curation exon 28972860 28973472 . + . Parent=GSCOCT00024117001 | |
| 13468 chr1 manual_curation CDS 28971849 28972250 . + 0 Parent=GSCOCT00024117001 | |
| 13469 chr1 manual_curation CDS 28972860 28973231 . + 0 Parent=GSCOCT00024117001 | |
| 13470 chr1 manual_curation gene 28978555 28980194 . - . ID=GSCOCG00024119001;Name=Cc01_g10310 | |
| 13471 chr1 manual_curation mRNA 28978555 28980194 . - . ID=GSCOCT00024119001;Parent=GSCOCG00024119001;Name=Cc01_g10310 | |
| 13472 chr1 manual_curation polypeptide 28978555 28980194 . - . ID=GSCOCP00024119001;Dbxref=GENE3D:G3DSA:4.10.280.10,InterPro:IPR001092,InterPro:IPR011598,PFAM:PF00010,PROFILE:PS50888,SMART:SM00353,SUPERFAMILY:SSF47459,SwissProt:Q0V7X4,SwissProt:Q2HIV9,SwissProt:Q9ZVX2,TAIR:AT2G16910.1,TAIR:AT2G28160.1,TAIR:AT5G57150.4,TrEMBL:D7SNA5,TrEMBL:Q5GA67,TrEMBL:Q8H6X2;Derives_from=GSCOCT00024119001;Name=Cc01_g10310;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0030528,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR,CC_functional_completeness:complete,CC_gene:FIT,CC_gene:AMS,CC_gene:BHLH35;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024119001~ Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR~ FIT~ complete;original_location=complement(join(1948627..1949079%2C1947920..1948117%2C1947627..1947800%2C1947440..1947544));owner=coffea | |
| 13473 chr1 manual_curation exon 28978555 28978659 . - . Parent=GSCOCT00024119001 | |
| 13474 chr1 manual_curation exon 28978742 28978915 . - . Parent=GSCOCT00024119001 | |
| 13475 chr1 manual_curation exon 28979035 28979232 . - . Parent=GSCOCT00024119001 | |
| 13476 chr1 manual_curation exon 28979742 28980194 . - . Parent=GSCOCT00024119001 | |
| 13477 chr1 manual_curation CDS 28978555 28978659 . - 0 Parent=GSCOCT00024119001 | |
| 13478 chr1 manual_curation CDS 28978742 28978915 . - 0 Parent=GSCOCT00024119001 | |
| 13479 chr1 manual_curation CDS 28979035 28979232 . - 0 Parent=GSCOCT00024119001 | |
| 13480 chr1 manual_curation CDS 28979742 28980194 . - 0 Parent=GSCOCT00024119001 | |
| 13481 chr1 manual_curation gene 28986971 28990001 . + . ID=GSCOCG00024120001;Name=Cc01_g10320 | |
| 13482 chr1 manual_curation mRNA 28986971 28990001 . + . ID=GSCOCT00024120001;Parent=GSCOCG00024120001;Name=Cc01_g10320 | |
| 13483 chr1 manual_curation polypeptide 28987537 28989722 . + . ID=GSCOCP00024120001;Dbxref=InterPro:IPR001841,InterPro:IPR008913,InterPro:IPR017921,InterPro:IPR018957,PFAM:PF00097,PFAM:PF05495,PROFILE:PS50089,PROFILE:PS51266,PROFILE:PS51270,SMART:SM00184,SwissProt:O14099,SwissProt:Q96PM5,SwissProt:Q9CR50,TAIR:AT5G18650.1,TAIR:AT5G22920.1,TAIR:AT5G25560.2,TrEMBL:B9HQP1,TrEMBL:D7SNA6,TrEMBL:D7TIT6;Derives_from=GSCOCT00024120001;Name=Cc01_g10320;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative RING finger and CHY zinc finger domain-containing protein 1,CC_functional_completeness:complete,CC_gene:Rchy1,CC_gene:RCHY1,CC_gene:SPAC2F3.16;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024120001~ Putative RING finger and CHY zinc finger domain-containing protein 1~ Rchy1~ complete;original_location=join(1956422..1956516%2C1956638..1956725%2C1956850..1956909%2C1957097..1957129%2C1957237..1957314%2C1957408..1957451%2C1957578..1957618%2C1957719..1957801%2C1957903..1957994%2C1958117..1958186%2C1958291..1958332%2C1958440..1958607);owner=coffea | |
| 13484 chr1 manual_curation exon 28986971 28987402 . + . Parent=GSCOCT00024120001 | |
| 13485 chr1 manual_curation exon 28987516 28987631 . + . Parent=GSCOCT00024120001 | |
| 13486 chr1 manual_curation exon 28987753 28987840 . + . Parent=GSCOCT00024120001 | |
| 13487 chr1 manual_curation exon 28987965 28988024 . + . Parent=GSCOCT00024120001 | |
| 13488 chr1 manual_curation exon 28988212 28988244 . + . Parent=GSCOCT00024120001 | |
| 13489 chr1 manual_curation exon 28988352 28988429 . + . Parent=GSCOCT00024120001 | |
| 13490 chr1 manual_curation exon 28988523 28988566 . + . Parent=GSCOCT00024120001 | |
| 13491 chr1 manual_curation exon 28988693 28988733 . + . Parent=GSCOCT00024120001 | |
| 13492 chr1 manual_curation exon 28988834 28988916 . + . Parent=GSCOCT00024120001 | |
| 13493 chr1 manual_curation exon 28989018 28989109 . + . Parent=GSCOCT00024120001 | |
| 13494 chr1 manual_curation exon 28989232 28989301 . + . Parent=GSCOCT00024120001 | |
| 13495 chr1 manual_curation exon 28989406 28989447 . + . Parent=GSCOCT00024120001 | |
| 13496 chr1 manual_curation exon 28989555 28990001 . + . Parent=GSCOCT00024120001 | |
| 13497 chr1 manual_curation CDS 28987537 28987631 . + 0 Parent=GSCOCT00024120001 | |
| 13498 chr1 manual_curation CDS 28987753 28987840 . + 2 Parent=GSCOCT00024120001 | |
| 13499 chr1 manual_curation CDS 28987965 28988024 . + 0 Parent=GSCOCT00024120001 | |
| 13500 chr1 manual_curation CDS 28988212 28988244 . + 0 Parent=GSCOCT00024120001 | |
| 13501 chr1 manual_curation CDS 28988352 28988429 . + 0 Parent=GSCOCT00024120001 | |
| 13502 chr1 manual_curation CDS 28988523 28988566 . + 0 Parent=GSCOCT00024120001 | |
| 13503 chr1 manual_curation CDS 28988693 28988733 . + 2 Parent=GSCOCT00024120001 | |
| 13504 chr1 manual_curation CDS 28988834 28988916 . + 1 Parent=GSCOCT00024120001 | |
| 13505 chr1 manual_curation CDS 28989018 28989109 . + 0 Parent=GSCOCT00024120001 | |
| 13506 chr1 manual_curation CDS 28989232 28989301 . + 2 Parent=GSCOCT00024120001 | |
| 13507 chr1 manual_curation CDS 28989406 28989447 . + 0 Parent=GSCOCT00024120001 | |
| 13508 chr1 manual_curation CDS 28989555 28989722 . + 0 Parent=GSCOCT00024120001 | |
| 13509 chr1 manual_curation gene 28991789 28995275 . - . ID=GSCOCG00024121001;Name=Cc01_g10330 | |
| 13510 chr1 manual_curation mRNA 28991789 28995275 . - . ID=GSCOCT00024121001;Parent=GSCOCG00024121001;Name=Cc01_g10330 | |
| 13511 chr1 manual_curation polypeptide 28992387 28995275 . - . ID=GSCOCP00024121001;Dbxref=InterPro:IPR010369,InterPro:IPR021182,PFAM:PF06136,PIR:PIRSF031043,TAIR:AT2G28150.1,TAIR:AT3G46110.1,TAIR:AT5G59790.1,TrEMBL:A5AGU0,TrEMBL:B9HQP0,TrEMBL:B9SCJ8;Derives_from=GSCOCT00024121001;Name=Cc01_g10330;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Domain of unknown function (DUF966),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024121001~ Domain of unknown function (DUF966)~ unknown_gene~ complete;original_location=complement(join(1963998..1964160%2C1963827..1963934%2C1963333..1963402%2C1963120..1963235%2C1961990..1962872%2C1961272..1961578));owner=coffea | |
| 13512 chr1 manual_curation exon 28991789 28992693 . - . Parent=GSCOCT00024121001 | |
| 13513 chr1 manual_curation exon 28993105 28993987 . - . Parent=GSCOCT00024121001 | |
| 13514 chr1 manual_curation exon 28994235 28994350 . - . Parent=GSCOCT00024121001 | |
| 13515 chr1 manual_curation exon 28994448 28994517 . - . Parent=GSCOCT00024121001 | |
| 13516 chr1 manual_curation exon 28994942 28995049 . - . Parent=GSCOCT00024121001 | |
| 13517 chr1 manual_curation exon 28995113 28995275 . - . Parent=GSCOCT00024121001 | |
| 13518 chr1 manual_curation CDS 28992387 28992693 . - 2 Parent=GSCOCT00024121001 | |
| 13519 chr1 manual_curation CDS 28993105 28993987 . - 1 Parent=GSCOCT00024121001 | |
| 13520 chr1 manual_curation CDS 28994235 28994350 . - 2 Parent=GSCOCT00024121001 | |
| 13521 chr1 manual_curation CDS 28994448 28994517 . - 1 Parent=GSCOCT00024121001 | |
| 13522 chr1 manual_curation CDS 28994942 28995049 . - 1 Parent=GSCOCT00024121001 | |
| 13523 chr1 manual_curation CDS 28995113 28995275 . - 0 Parent=GSCOCT00024121001 | |
| 13524 chr1 manual_curation gene 28999868 29009272 . + . ID=GSCOCG00024123001;Name=Cc01_g10340 | |
| 13525 chr1 manual_curation mRNA 28999868 29009272 . + . ID=GSCOCT00024123001;Parent=GSCOCG00024123001;Name=Cc01_g10340 | |
| 13526 chr1 manual_curation polypeptide 29000188 29008948 . + . ID=GSCOCP00024123001;Dbxref=GENE3D:G3DSA:2.40.50.140,InterPro:IPR000977,InterPro:IPR012308,InterPro:IPR012309,InterPro:IPR012310,InterPro:IPR012340,InterPro:IPR016059,PFAM:PF01068,PFAM:PF04675,PFAM:PF04679,PROFILE:PS50160,PROSITE:PS00333,PROSITE:PS00697,SwissProt:P51892,SwissProt:Q42572,SwissProt:Q869E1,TAIR:AT1G08130.1,TAIR:AT1G49250.1,TAIR:AT1G66730.1,TIGRFAMs:TIGR00574,TrEMBL:B9HQN9,TrEMBL:D7KHZ2,TrEMBL:F6GW85;Derives_from=GSCOCT00024123001;Name=Cc01_g10340;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003910,GO:0005524,GO:0006260,GO:0006281,GO:0006310,CC_EC_number:6.5.1.1,PRODUCT:DNA ligase 1,CC_functional_completeness:complete,CC_gene:LIG1,CC_gene:lig1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024123001~ DNA ligase 1~ LIG1~ complete;original_location=join(1969073..1969216%2C1969298..1969705%2C1970731..1970847%2C1971938..1972039%2C1972116..1972232%2C1972379..1972609%2C1972698..1972792%2C1973123..1973210%2C1974461..1974592%2C1974894..1975006%2C1975621..1975722%2C1975801..1975862%2C1976069..1976140%2C1976268..1976341%2C1976439..1976495%2C1976926..1977003%2C1977585..1977662%2C1977771..1977833);owner=coffea | |
| 13527 chr1 manual_curation exon 28999868 29000331 . + . Parent=GSCOCT00024123001 | |
| 13528 chr1 manual_curation exon 29000413 29000820 . + . Parent=GSCOCT00024123001 | |
| 13529 chr1 manual_curation exon 29001846 29001962 . + . Parent=GSCOCT00024123001 | |
| 13530 chr1 manual_curation exon 29003053 29003154 . + . Parent=GSCOCT00024123001 | |
| 13531 chr1 manual_curation exon 29003231 29003347 . + . Parent=GSCOCT00024123001 | |
| 13532 chr1 manual_curation exon 29003494 29003724 . + . Parent=GSCOCT00024123001 | |
| 13533 chr1 manual_curation exon 29003813 29003907 . + . Parent=GSCOCT00024123001 | |
| 13534 chr1 manual_curation exon 29004238 29004325 . + . Parent=GSCOCT00024123001 | |
| 13535 chr1 manual_curation exon 29005576 29005707 . + . Parent=GSCOCT00024123001 | |
| 13536 chr1 manual_curation exon 29006009 29006121 . + . Parent=GSCOCT00024123001 | |
| 13537 chr1 manual_curation exon 29006736 29006837 . + . Parent=GSCOCT00024123001 | |
| 13538 chr1 manual_curation exon 29006916 29006977 . + . Parent=GSCOCT00024123001 | |
| 13539 chr1 manual_curation exon 29007184 29007255 . + . Parent=GSCOCT00024123001 | |
| 13540 chr1 manual_curation exon 29007383 29007456 . + . Parent=GSCOCT00024123001 | |
| 13541 chr1 manual_curation exon 29007554 29007610 . + . Parent=GSCOCT00024123001 | |
| 13542 chr1 manual_curation exon 29008041 29008118 . + . Parent=GSCOCT00024123001 | |
| 13543 chr1 manual_curation exon 29008700 29008777 . + . Parent=GSCOCT00024123001 | |
| 13544 chr1 manual_curation exon 29008886 29009272 . + . Parent=GSCOCT00024123001 | |
| 13545 chr1 manual_curation CDS 29000188 29000331 . + 0 Parent=GSCOCT00024123001 | |
| 13546 chr1 manual_curation CDS 29000413 29000820 . + 0 Parent=GSCOCT00024123001 | |
| 13547 chr1 manual_curation CDS 29001846 29001962 . + 0 Parent=GSCOCT00024123001 | |
| 13548 chr1 manual_curation CDS 29003053 29003154 . + 0 Parent=GSCOCT00024123001 | |
| 13549 chr1 manual_curation CDS 29003231 29003347 . + 0 Parent=GSCOCT00024123001 | |
| 13550 chr1 manual_curation CDS 29003494 29003724 . + 0 Parent=GSCOCT00024123001 | |
| 13551 chr1 manual_curation CDS 29003813 29003907 . + 0 Parent=GSCOCT00024123001 | |
| 13552 chr1 manual_curation CDS 29004238 29004325 . + 2 Parent=GSCOCT00024123001 | |
| 13553 chr1 manual_curation CDS 29005576 29005707 . + 0 Parent=GSCOCT00024123001 | |
| 13554 chr1 manual_curation CDS 29006009 29006121 . + 0 Parent=GSCOCT00024123001 | |
| 13555 chr1 manual_curation CDS 29006736 29006837 . + 2 Parent=GSCOCT00024123001 | |
| 13556 chr1 manual_curation CDS 29006916 29006977 . + 2 Parent=GSCOCT00024123001 | |
| 13557 chr1 manual_curation CDS 29007184 29007255 . + 1 Parent=GSCOCT00024123001 | |
| 13558 chr1 manual_curation CDS 29007383 29007456 . + 1 Parent=GSCOCT00024123001 | |
| 13559 chr1 manual_curation CDS 29007554 29007610 . + 0 Parent=GSCOCT00024123001 | |
| 13560 chr1 manual_curation CDS 29008041 29008118 . + 0 Parent=GSCOCT00024123001 | |
| 13561 chr1 manual_curation CDS 29008700 29008777 . + 0 Parent=GSCOCT00024123001 | |
| 13562 chr1 manual_curation CDS 29008886 29008948 . + 0 Parent=GSCOCT00024123001 | |
| 13563 chr1 manual_curation gene 29011850 29013016 . - . ID=GSCOCG00024125001;Name=Cc01_g10350 | |
| 13564 chr1 manual_curation mRNA 29011850 29013016 . - . ID=GSCOCT00024125001;Parent=GSCOCG00024125001;Name=Cc01_g10350 | |
| 13565 chr1 manual_curation polypeptide 29011850 29012776 . - . ID=GSCOCP00024125001;Dbxref=InterPro:IPR012862,PFAM:PF07795,TAIR:AT2G28140.1,TAIR:AT3G44940.1,TAIR:AT5G22930.1,TrEMBL:I1LL00,TrEMBL:I1LR87,TrEMBL:I1M4G8;Derives_from=GSCOCT00024125001;Name=Cc01_g10350;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF1635),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024125001~ Protein of unknown function (DUF1635)~ unknown_gene~ complete;original_location=complement(join(1981608..1981661%2C1980735..1981520));owner=coffea | |
| 13566 chr1 manual_curation exon 29011850 29012635 . - . Parent=GSCOCT00024125001 | |
| 13567 chr1 manual_curation exon 29012723 29013016 . - . Parent=GSCOCT00024125001 | |
| 13568 chr1 manual_curation CDS 29011850 29012635 . - 0 Parent=GSCOCT00024125001 | |
| 13569 chr1 manual_curation CDS 29012723 29012776 . - 0 Parent=GSCOCT00024125001 | |
| 13570 chr1 manual_curation gene 29021500 29023766 . - . ID=GSCOCG00024127001;Name=Cc01_g10360 | |
| 13571 chr1 manual_curation mRNA 29021500 29023766 . - . ID=GSCOCT00024127001;Parent=GSCOCG00024127001;Name=Cc01_g10360 | |
| 13572 chr1 manual_curation polypeptide 29021500 29023766 . - . ID=GSCOCP00024127001;Dbxref=InterPro:IPR011515,PFAM:PF07557,SwissProt:Q4QSC8,TAIR:AT3G10440.1,TAIR:AT5G04320.2,TrEMBL:B9HQN7,TrEMBL:B9SCJ5,TrEMBL:D7TM48;Derives_from=GSCOCT00024127001;Name=Cc01_g10360;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0045132,CC_EC_number:missing_EC_number,PRODUCT:Shugoshin-1%2C putative,CC_functional_completeness:complete,CC_gene:SGO1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024127001~ Shugoshin-1%2C putative~ SGO1~ complete;original_location=complement(join(1992490..1992651%2C1992357..1992394%2C1992163..1992271%2C1992037..1992060%2C1991833..1991952%2C1991074..1991152%2C1990924..1990987%2C1990385..1990682));owner=coffea | |
| 13573 chr1 manual_curation exon 29021500 29021797 . - . Parent=GSCOCT00024127001 | |
| 13574 chr1 manual_curation exon 29022039 29022102 . - . Parent=GSCOCT00024127001 | |
| 13575 chr1 manual_curation exon 29022189 29022267 . - . Parent=GSCOCT00024127001 | |
| 13576 chr1 manual_curation exon 29022948 29023067 . - . Parent=GSCOCT00024127001 | |
| 13577 chr1 manual_curation exon 29023152 29023175 . - . Parent=GSCOCT00024127001 | |
| 13578 chr1 manual_curation exon 29023278 29023386 . - . Parent=GSCOCT00024127001 | |
| 13579 chr1 manual_curation exon 29023472 29023509 . - . Parent=GSCOCT00024127001 | |
| 13580 chr1 manual_curation exon 29023605 29023766 . - . Parent=GSCOCT00024127001 | |
| 13581 chr1 manual_curation CDS 29021500 29021797 . - 2 Parent=GSCOCT00024127001 | |
| 13582 chr1 manual_curation CDS 29022039 29022102 . - 1 Parent=GSCOCT00024127001 | |
| 13583 chr1 manual_curation CDS 29022189 29022267 . - 0 Parent=GSCOCT00024127001 | |
| 13584 chr1 manual_curation CDS 29022948 29023067 . - 0 Parent=GSCOCT00024127001 | |
| 13585 chr1 manual_curation CDS 29023152 29023175 . - 0 Parent=GSCOCT00024127001 | |
| 13586 chr1 manual_curation CDS 29023278 29023386 . - 2 Parent=GSCOCT00024127001 | |
| 13587 chr1 manual_curation CDS 29023472 29023509 . - 0 Parent=GSCOCT00024127001 | |
| 13588 chr1 manual_curation CDS 29023605 29023766 . - 0 Parent=GSCOCT00024127001 | |
| 13589 chr1 manual_curation gene 29025575 29030605 . - . ID=GSCOCG00024130001;Name=Cc01_g10370 | |
| 13590 chr1 manual_curation mRNA 29025575 29030605 . - . ID=GSCOCT00024130001;Parent=GSCOCG00024130001;Name=Cc01_g10370 | |
| 13591 chr1 manual_curation polypeptide 29025575 29030605 . - . ID=GSCOCP00024130001;Dbxref=TAIR:AT2G28130.1,TrEMBL:A5B1Q1,TrEMBL:B9SCJ4,TrEMBL:D7SNB6;Derives_from=GSCOCT00024130001;Name=Cc01_g10370;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024130001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 13 growth stages%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(1999414..1999490%2C1999109..1999295%2C1998661..1998723%2C1998450..1998555%2C1998108..1998212%2C1997950..1998026%2C1997710..1997839%2C1996891..1996963%2C1996589..1996780%2C1995499..1995619%2C1994580..1994804%2C1994460..1994507));owner=coffea | |
| 13592 chr1 manual_curation exon 29025575 29025622 . - . Parent=GSCOCT00024130001 | |
| 13593 chr1 manual_curation exon 29025695 29025919 . - . Parent=GSCOCT00024130001 | |
| 13594 chr1 manual_curation exon 29026614 29026734 . - . Parent=GSCOCT00024130001 | |
| 13595 chr1 manual_curation exon 29027704 29027895 . - . Parent=GSCOCT00024130001 | |
| 13596 chr1 manual_curation exon 29028006 29028078 . - . Parent=GSCOCT00024130001 | |
| 13597 chr1 manual_curation exon 29028825 29028954 . - . Parent=GSCOCT00024130001 | |
| 13598 chr1 manual_curation exon 29029065 29029141 . - . Parent=GSCOCT00024130001 | |
| 13599 chr1 manual_curation exon 29029223 29029327 . - . Parent=GSCOCT00024130001 | |
| 13600 chr1 manual_curation exon 29029565 29029670 . - . Parent=GSCOCT00024130001 | |
| 13601 chr1 manual_curation exon 29029776 29029838 . - . Parent=GSCOCT00024130001 | |
| 13602 chr1 manual_curation exon 29030224 29030410 . - . Parent=GSCOCT00024130001 | |
| 13603 chr1 manual_curation exon 29030529 29030605 . - . Parent=GSCOCT00024130001 | |
| 13604 chr1 manual_curation CDS 29025575 29025622 . - 0 Parent=GSCOCT00024130001 | |
| 13605 chr1 manual_curation CDS 29025695 29025919 . - 0 Parent=GSCOCT00024130001 | |
| 13606 chr1 manual_curation CDS 29026614 29026734 . - 2 Parent=GSCOCT00024130001 | |
| 13607 chr1 manual_curation CDS 29027704 29027895 . - 2 Parent=GSCOCT00024130001 | |
| 13608 chr1 manual_curation CDS 29028006 29028078 . - 1 Parent=GSCOCT00024130001 | |
| 13609 chr1 manual_curation CDS 29028825 29028954 . - 0 Parent=GSCOCT00024130001 | |
| 13610 chr1 manual_curation CDS 29029065 29029141 . - 1 Parent=GSCOCT00024130001 | |
| 13611 chr1 manual_curation CDS 29029223 29029327 . - 1 Parent=GSCOCT00024130001 | |
| 13612 chr1 manual_curation CDS 29029565 29029670 . - 0 Parent=GSCOCT00024130001 | |
| 13613 chr1 manual_curation CDS 29029776 29029838 . - 0 Parent=GSCOCT00024130001 | |
| 13614 chr1 manual_curation CDS 29030224 29030410 . - 2 Parent=GSCOCT00024130001 | |
| 13615 chr1 manual_curation CDS 29030529 29030605 . - 0 Parent=GSCOCT00024130001 | |
| 13616 chr1 manual_curation gene 29032301 29036218 . + . ID=GSCOCG00024132001;Name=Cc01_g10380 | |
| 13617 chr1 manual_curation mRNA 29032301 29036218 . + . ID=GSCOCT00024132001;Parent=GSCOCG00024132001;Name=Cc01_g10380 | |
| 13618 chr1 manual_curation polypeptide 29032771 29035886 . + . ID=GSCOCP00024132001;Dbxref=InterPro:IPR019009,PFAM:PF09439,SwissProt:P47758,SwissProt:Q4FZX7,SwissProt:Q54XX1,TAIR:AT2G18770.1,TAIR:AT5G05670.2,TrEMBL:D7TDJ2,TrEMBL:I1J575,TrEMBL:I1JC42;Derives_from=GSCOCT00024132001;Name=Cc01_g10380;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Signal recognition particle receptor subunit beta,CC_functional_completeness:fragment,CC_gene:srprb,CC_gene:Srprb;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024132001~ Putative Signal recognition particle receptor subunit beta~ srprb~ fragment;original_location=join(2001656..2001803%2C2003146..2003228%2C2003332..2003418%2C2003894..2004042%2C2004133..2004264%2C2004582..2004771);owner=coffea | |
| 13619 chr1 manual_curation exon 29032301 29032582 . + . Parent=GSCOCT00024132001 | |
| 13620 chr1 manual_curation exon 29032761 29032918 . + . Parent=GSCOCT00024132001 | |
| 13621 chr1 manual_curation exon 29034261 29034343 . + . Parent=GSCOCT00024132001 | |
| 13622 chr1 manual_curation exon 29034447 29034533 . + . Parent=GSCOCT00024132001 | |
| 13623 chr1 manual_curation exon 29035009 29035157 . + . Parent=GSCOCT00024132001 | |
| 13624 chr1 manual_curation exon 29035248 29035379 . + . Parent=GSCOCT00024132001 | |
| 13625 chr1 manual_curation exon 29035697 29036218 . + . Parent=GSCOCT00024132001 | |
| 13626 chr1 manual_curation CDS 29032771 29032918 . + 0 Parent=GSCOCT00024132001 | |
| 13627 chr1 manual_curation CDS 29034261 29034343 . + 1 Parent=GSCOCT00024132001 | |
| 13628 chr1 manual_curation CDS 29034447 29034533 . + 0 Parent=GSCOCT00024132001 | |
| 13629 chr1 manual_curation CDS 29035009 29035157 . + 0 Parent=GSCOCT00024132001 | |
| 13630 chr1 manual_curation CDS 29035248 29035379 . + 2 Parent=GSCOCT00024132001 | |
| 13631 chr1 manual_curation CDS 29035697 29035886 . + 2 Parent=GSCOCT00024132001 | |
| 13632 chr1 manual_curation gene 29037862 29039643 . - . ID=GSCOCG00024134001;Name=Cc01_g10390 | |
| 13633 chr1 manual_curation mRNA 29037862 29039643 . - . ID=GSCOCT00024134001;Parent=GSCOCG00024134001;Name=Cc01_g10390 | |
| 13634 chr1 manual_curation polypeptide 29037862 29039643 . - . ID=GSCOCP00024134001;Dbxref=InterPro:IPR010658,InterPro:IPR016196,PFAM:PF06813,SUPERFAMILY:SSF103473,TAIR:AT1G74780.1,TAIR:AT2G28120.1,TAIR:AT2G39210.1,TrEMBL:A9PFI6,TrEMBL:B9HQN5,TrEMBL:D7LIF1;Derives_from=GSCOCT00024134001;Name=Cc01_g10390;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Major facilitator superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024134001~ Major facilitator superfamily protein~ unknown_gene~ complete;original_location=complement(2006747..2008528);owner=coffea | |
| 13635 chr1 manual_curation exon 29037862 29039643 . - . Parent=GSCOCT00024134001 | |
| 13636 chr1 manual_curation CDS 29037862 29039643 . - 0 Parent=GSCOCT00024134001 | |
| 13637 chr1 manual_curation gene 29055483 29058361 . + . ID=GSCOCG00024136001;Name=Cc01_g10400 | |
| 13638 chr1 manual_curation mRNA 29055483 29058361 . + . ID=GSCOCT00024136001;Parent=GSCOCG00024136001;Name=Cc01_g10400 | |
| 13639 chr1 manual_curation polypeptide 29056029 29057745 . + . ID=GSCOCP00024136001;Dbxref=InterPro:IPR004263,PFAM:PF03016,SwissProt:Q10SX7,SwissProt:Q6NMM8,SwissProt:Q9ZUV3,TAIR:AT2G28110.1,TAIR:AT5G22940.1,TAIR:AT5G61840.1,TrEMBL:B9HQN3,TrEMBL:B9SCJ1,TrEMBL:Q5BM98;Derives_from=GSCOCT00024136001;Name=Cc01_g10400;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:2.4.1.224,PRODUCT:Probable glucuronoxylan glucuronosyltransferase IRX7,CC_functional_completeness:complete,CC_gene:IRX7,CC_gene:F8H,CC_gene:Os03g0107900;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024136001~ Probable glucuronoxylan glucuronosyltransferase IRX7~ IRX7~ complete;original_location=join(2024914..2025229%2C2025330..2025691%2C2025808..2026058%2C2026165..2026630);owner=coffea | |
| 13640 chr1 manual_curation exon 29055483 29056344 . + . Parent=GSCOCT00024136001 | |
| 13641 chr1 manual_curation exon 29056445 29056806 . + . Parent=GSCOCT00024136001 | |
| 13642 chr1 manual_curation exon 29056923 29057173 . + . Parent=GSCOCT00024136001 | |
| 13643 chr1 manual_curation exon 29057280 29058361 . + . Parent=GSCOCT00024136001 | |
| 13644 chr1 manual_curation CDS 29056029 29056344 . + 0 Parent=GSCOCT00024136001 | |
| 13645 chr1 manual_curation CDS 29056445 29056806 . + 1 Parent=GSCOCT00024136001 | |
| 13646 chr1 manual_curation CDS 29056923 29057173 . + 0 Parent=GSCOCT00024136001 | |
| 13647 chr1 manual_curation CDS 29057280 29057745 . + 2 Parent=GSCOCT00024136001 | |
| 13648 chr1 manual_curation gene 29062860 29065252 . - . ID=GSCOCG00024137001;Name=Cc01_g10410 | |
| 13649 chr1 manual_curation mRNA 29062860 29065252 . - . ID=GSCOCT00024137001;Parent=GSCOCG00024137001;Name=Cc01_g10410 | |
| 13650 chr1 manual_curation polypeptide 29063332 29065124 . - . ID=GSCOCP00024137001;Dbxref=GENE3D:G3DSA:2.60.120.200,InterPro:IPR000757,InterPro:IPR008985,InterPro:IPR010713,InterPro:IPR013320,InterPro:IPR016455,PFAM:PF00722,PFAM:PF06955,PIR:PIRSF005604,SUPERFAMILY:SSF49899,SwissProt:P93046,SwissProt:Q38908,SwissProt:Q9SJL9,TAIR:AT1G32170.1,TAIR:AT2G36870.1,TAIR:AT3G44990.1,TrEMBL:A0MMD6,TrEMBL:B9SCJ0,TrEMBL:Q93XM0;Derives_from=GSCOCT00024137001;Name=Cc01_g10410;Ontology_term=CC_evidence_code:ISS,GO:0005618,GO:0005975,GO:0006073,GO:0016762,GO:0048046,CC_EC_number:2.4.1.207,PRODUCT:Probable xyloglucan endotransglucosylase/hydrolase protein 32,CC_functional_completeness:complete,CC_gene:XTH32,CC_gene:XTH31,CC_gene:XTH30;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024137001~ Probable xyloglucan endotransglucosylase/hydrolase protein 32~ XTH32~ complete;original_location=complement(join(2033808..2034009%2C2033610..2033710%2C2033311..2033528%2C2032217..2032577));owner=coffea | |
| 13651 chr1 manual_curation exon 29062860 29063692 . - . Parent=GSCOCT00024137001 | |
| 13652 chr1 manual_curation exon 29064426 29064643 . - . Parent=GSCOCT00024137001 | |
| 13653 chr1 manual_curation exon 29064725 29064825 . - . Parent=GSCOCT00024137001 | |
| 13654 chr1 manual_curation exon 29064923 29065252 . - . Parent=GSCOCT00024137001 | |
| 13655 chr1 manual_curation CDS 29063332 29063692 . - 2 Parent=GSCOCT00024137001 | |
| 13656 chr1 manual_curation CDS 29064426 29064643 . - 0 Parent=GSCOCT00024137001 | |
| 13657 chr1 manual_curation CDS 29064725 29064825 . - 1 Parent=GSCOCT00024137001 | |
| 13658 chr1 manual_curation CDS 29064923 29065124 . - 0 Parent=GSCOCT00024137001 | |
| 13659 chr1 manual_curation gene 29073261 29077945 . + . ID=GSCOCG00024138001;Name=Cc01_g10420 | |
| 13660 chr1 manual_curation mRNA 29073261 29077945 . + . ID=GSCOCT00024138001;Parent=GSCOCG00024138001;Name=Cc01_g10420 | |
| 13661 chr1 manual_curation polypeptide 29073596 29077580 . + . ID=GSCOCP00024138001;Dbxref=InterPro:IPR005024,PFAM:PF03357,SwissProt:Q6NRM7,SwissProt:Q9FFB3,SwissProt:Q9LXH5,TAIR:AT1G03950.1,TAIR:AT3G45000.1,TAIR:AT5G22950.1,TrEMBL:C6TD23,TrEMBL:C6TGZ1,TrEMBL:I1KD82;Derives_from=GSCOCT00024138001;Name=Cc01_g10420;Ontology_term=CC_evidence_code:ISS,GO:0015031,CC_EC_number:missing_EC_number,PRODUCT:Vacuolar protein sorting-associated protein 24 homolog 1,CC_functional_completeness:complete,CC_gene:VPS24-1,CC_gene:VPS24-2,CC_gene:chmp3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024138001~ Vacuolar protein sorting-associated protein 24 homolog 1~ VPS24-1~ complete;original_location=join(2042481..2042592%2C2042709..2042785%2C2044433..2044535%2C2045545..2045666%2C2046120..2046305%2C2046406..2046465);owner=coffea | |
| 13662 chr1 manual_curation exon 29073261 29073707 . + . Parent=GSCOCT00024138001 | |
| 13663 chr1 manual_curation exon 29073824 29073900 . + . Parent=GSCOCT00024138001 | |
| 13664 chr1 manual_curation exon 29075548 29075650 . + . Parent=GSCOCT00024138001 | |
| 13665 chr1 manual_curation exon 29076660 29076781 . + . Parent=GSCOCT00024138001 | |
| 13666 chr1 manual_curation exon 29077235 29077420 . + . Parent=GSCOCT00024138001 | |
| 13667 chr1 manual_curation exon 29077521 29077945 . + . Parent=GSCOCT00024138001 | |
| 13668 chr1 manual_curation CDS 29073596 29073707 . + 0 Parent=GSCOCT00024138001 | |
| 13669 chr1 manual_curation CDS 29073824 29073900 . + 1 Parent=GSCOCT00024138001 | |
| 13670 chr1 manual_curation CDS 29075548 29075650 . + 0 Parent=GSCOCT00024138001 | |
| 13671 chr1 manual_curation CDS 29076660 29076781 . + 1 Parent=GSCOCT00024138001 | |
| 13672 chr1 manual_curation CDS 29077235 29077420 . + 0 Parent=GSCOCT00024138001 | |
| 13673 chr1 manual_curation CDS 29077521 29077580 . + 0 Parent=GSCOCT00024138001 | |
| 13674 chr1 manual_curation gene 29082347 29086785 . + . ID=GSCOCG00024139001;Name=Cc01_g10430 | |
| 13675 chr1 manual_curation mRNA 29082347 29086785 . + . ID=GSCOCT00024139001;Parent=GSCOCG00024139001;Name=Cc01_g10430 | |
| 13676 chr1 manual_curation polypeptide 29082347 29086480 . + . ID=GSCOCP00024139001;Dbxref=InterPro:IPR001563,InterPro:IPR018202,PANTHER:PTHR11802,PFAM:PF00450,PRINTS:PR00724,PROSITE:PS00131,PROSITE:PS00560,SwissProt:P32826,SwissProt:P37891,SwissProt:Q56WF8,TAIR:AT3G10410.1,TAIR:AT3G45010.1,TAIR:AT5G22980.1,TrEMBL:B9N866,TrEMBL:B9SCI8,TrEMBL:Q8VWQ0;Derives_from=GSCOCT00024139001;Name=Cc01_g10430;Ontology_term=CC_evidence_code:ISS,GO:0004185,GO:0006508,CC_EC_number:3.4.16.5,PRODUCT:Serine carboxypeptidase-like 48,CC_functional_completeness:complete,CC_gene:SCPL48,CC_gene:SCPL49,CC_gene:CBP3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024139001~ Serine carboxypeptidase-like 48~ SCPL48~ complete;original_location=join(2051232..2051569%2C2052200..2052368%2C2052942..2053061%2C2053455..2053598%2C2053686..2053836%2C2054566..2054654%2C2054762..2055020%2C2055109..2055365);owner=coffea | |
| 13677 chr1 manual_curation exon 29082347 29082684 . + . Parent=GSCOCT00024139001 | |
| 13678 chr1 manual_curation exon 29083315 29083483 . + . Parent=GSCOCT00024139001 | |
| 13679 chr1 manual_curation exon 29084057 29084176 . + . Parent=GSCOCT00024139001 | |
| 13680 chr1 manual_curation exon 29084570 29084713 . + . Parent=GSCOCT00024139001 | |
| 13681 chr1 manual_curation exon 29084801 29084951 . + . Parent=GSCOCT00024139001 | |
| 13682 chr1 manual_curation exon 29085681 29085769 . + . Parent=GSCOCT00024139001 | |
| 13683 chr1 manual_curation exon 29085877 29086135 . + . Parent=GSCOCT00024139001 | |
| 13684 chr1 manual_curation exon 29086224 29086785 . + . Parent=GSCOCT00024139001 | |
| 13685 chr1 manual_curation CDS 29082347 29082684 . + 0 Parent=GSCOCT00024139001 | |
| 13686 chr1 manual_curation CDS 29083315 29083483 . + 2 Parent=GSCOCT00024139001 | |
| 13687 chr1 manual_curation CDS 29084057 29084176 . + 0 Parent=GSCOCT00024139001 | |
| 13688 chr1 manual_curation CDS 29084570 29084713 . + 0 Parent=GSCOCT00024139001 | |
| 13689 chr1 manual_curation CDS 29084801 29084951 . + 0 Parent=GSCOCT00024139001 | |
| 13690 chr1 manual_curation CDS 29085681 29085769 . + 1 Parent=GSCOCT00024139001 | |
| 13691 chr1 manual_curation CDS 29085877 29086135 . + 0 Parent=GSCOCT00024139001 | |
| 13692 chr1 manual_curation CDS 29086224 29086480 . + 1 Parent=GSCOCT00024139001 | |
| 13693 chr1 manual_curation gene 29088676 29092313 . + . ID=GSCOCG00024140001;Name=Cc01_g10440 | |
| 13694 chr1 manual_curation mRNA 29088676 29092313 . + . ID=GSCOCT00024140001;Parent=GSCOCG00024140001;Name=Cc01_g10440 | |
| 13695 chr1 manual_curation polypeptide 29088764 29092159 . + . ID=GSCOCP00024140001;Dbxref=InterPro:IPR001563,InterPro:IPR018202,PANTHER:PTHR11802,PFAM:PF00450,PRINTS:PR00724,PROSITE:PS00131,PROSITE:PS00560,SwissProt:P21529,SwissProt:P37891,SwissProt:Q56WF8,TAIR:AT3G10410.1,TAIR:AT3G45010.1,TAIR:AT5G22980.1,TrEMBL:B9SCI8,TrEMBL:E0CJP2,TrEMBL:Q2Z1Y2;Derives_from=GSCOCT00024140001;Name=Cc01_g10440;Ontology_term=CC_evidence_code:ISS,GO:0004185,GO:0006508,CC_EC_number:3.4.16.5,PRODUCT:Serine carboxypeptidase-like 48,CC_functional_completeness:complete,CC_gene:SCPL48,CC_gene:CBP3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024140001~ Serine carboxypeptidase-like 48~ SCPL48~ complete;original_location=join(2057649..2057995%2C2059037..2059205%2C2059465..2059584%2C2059777..2059920%2C2060009..2060159%2C2060290..2060378%2C2060481..2060739%2C2060824..2061044);owner=coffea | |
| 13696 chr1 manual_curation exon 29088676 29089110 . + . Parent=GSCOCT00024140001 | |
| 13697 chr1 manual_curation exon 29090152 29090320 . + . Parent=GSCOCT00024140001 | |
| 13698 chr1 manual_curation exon 29090580 29090699 . + . Parent=GSCOCT00024140001 | |
| 13699 chr1 manual_curation exon 29090892 29091035 . + . Parent=GSCOCT00024140001 | |
| 13700 chr1 manual_curation exon 29091124 29091274 . + . Parent=GSCOCT00024140001 | |
| 13701 chr1 manual_curation exon 29091405 29091493 . + . Parent=GSCOCT00024140001 | |
| 13702 chr1 manual_curation exon 29091596 29091854 . + . Parent=GSCOCT00024140001 | |
| 13703 chr1 manual_curation exon 29091939 29092313 . + . Parent=GSCOCT00024140001 | |
| 13704 chr1 manual_curation CDS 29088764 29089110 . + 0 Parent=GSCOCT00024140001 | |
| 13705 chr1 manual_curation CDS 29090152 29090320 . + 2 Parent=GSCOCT00024140001 | |
| 13706 chr1 manual_curation CDS 29090580 29090699 . + 0 Parent=GSCOCT00024140001 | |
| 13707 chr1 manual_curation CDS 29090892 29091035 . + 0 Parent=GSCOCT00024140001 | |
| 13708 chr1 manual_curation CDS 29091124 29091274 . + 0 Parent=GSCOCT00024140001 | |
| 13709 chr1 manual_curation CDS 29091405 29091493 . + 1 Parent=GSCOCT00024140001 | |
| 13710 chr1 manual_curation CDS 29091596 29091854 . + 0 Parent=GSCOCT00024140001 | |
| 13711 chr1 manual_curation CDS 29091939 29092159 . + 1 Parent=GSCOCT00024140001 | |
| 13712 chr1 manual_curation gene 29093607 29096699 . + . ID=GSCOCG00024141001;Name=Cc01_g10450 | |
| 13713 chr1 manual_curation mRNA 29093607 29096699 . + . ID=GSCOCT00024141001;Parent=GSCOCG00024141001;Name=Cc01_g10450 | |
| 13714 chr1 manual_curation polypeptide 29093607 29096581 . + . ID=GSCOCP00024141001;Dbxref=InterPro:IPR001563,InterPro:IPR018202,PANTHER:PTHR11802,PFAM:PF00450,PRINTS:PR00724,PROSITE:PS00131,PROSITE:PS00560,SwissProt:P32826,SwissProt:P37891,SwissProt:Q56WF8,TAIR:AT3G10410.1,TAIR:AT3G45010.1,TAIR:AT5G22980.1,TrEMBL:B9N866,TrEMBL:B9SCI8,TrEMBL:E0CJP2;Derives_from=GSCOCT00024141001;Name=Cc01_g10450;Ontology_term=CC_evidence_code:ISS,GO:0004185,GO:0006508,CC_EC_number:3.4.16.5,PRODUCT:Serine carboxypeptidase-like 48,CC_functional_completeness:complete,CC_gene:SCPL48,CC_gene:CBP3,CC_gene:SCPL49;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024141001~ Serine carboxypeptidase-like 48~ SCPL48~ complete;original_location=join(2062492..2062820%2C2063371..2063542%2C2063852..2063971%2C2064064..2064207%2C2064289..2064439%2C2064692..2064780%2C2064884..2065142%2C2065246..2065466);owner=coffea | |
| 13715 chr1 manual_curation exon 29093607 29093935 . + . Parent=GSCOCT00024141001 | |
| 13716 chr1 manual_curation exon 29094486 29094657 . + . Parent=GSCOCT00024141001 | |
| 13717 chr1 manual_curation exon 29094967 29095086 . + . Parent=GSCOCT00024141001 | |
| 13718 chr1 manual_curation exon 29095179 29095322 . + . Parent=GSCOCT00024141001 | |
| 13719 chr1 manual_curation exon 29095404 29095554 . + . Parent=GSCOCT00024141001 | |
| 13720 chr1 manual_curation exon 29095807 29095895 . + . Parent=GSCOCT00024141001 | |
| 13721 chr1 manual_curation exon 29095999 29096257 . + . Parent=GSCOCT00024141001 | |
| 13722 chr1 manual_curation exon 29096361 29096699 . + . Parent=GSCOCT00024141001 | |
| 13723 chr1 manual_curation CDS 29093607 29093935 . + 0 Parent=GSCOCT00024141001 | |
| 13724 chr1 manual_curation CDS 29094486 29094657 . + 2 Parent=GSCOCT00024141001 | |
| 13725 chr1 manual_curation CDS 29094967 29095086 . + 0 Parent=GSCOCT00024141001 | |
| 13726 chr1 manual_curation CDS 29095179 29095322 . + 0 Parent=GSCOCT00024141001 | |
| 13727 chr1 manual_curation CDS 29095404 29095554 . + 0 Parent=GSCOCT00024141001 | |
| 13728 chr1 manual_curation CDS 29095807 29095895 . + 1 Parent=GSCOCT00024141001 | |
| 13729 chr1 manual_curation CDS 29095999 29096257 . + 0 Parent=GSCOCT00024141001 | |
| 13730 chr1 manual_curation CDS 29096361 29096581 . + 1 Parent=GSCOCT00024141001 | |
| 13731 chr1 manual_curation gene 29097499 29099274 . - . ID=GSCOCG00024142001;Name=Cc01_g10460 | |
| 13732 chr1 manual_curation mRNA 29097499 29099274 . - . ID=GSCOCT00024142001;Parent=GSCOCG00024142001;Name=Cc01_g10460 | |
| 13733 chr1 manual_curation polypeptide 29097721 29099201 . - . ID=GSCOCP00024142001;Dbxref=InterPro:IPR016027,SUPERFAMILY:SSF50249,TAIR:AT2G28105.1,TrEMBL:B9N865,TrEMBL:B9SCI7,TrEMBL:D7SNC5;Derives_from=GSCOCT00024142001;Name=Cc01_g10460;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:CONTAINS InterPro DOMAIN/s,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024142001~ CONTAINS InterPro DOMAIN/s: Nucleic acid-binding%2C OB-fold-like (InterPro:IPR016027)%2C Replication factor A%2C C-terminal (InterPro:IPR013955)%3B Has 20 Blast hits to 20 proteins in 10 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2%3B Fungi - 0%3B Plants - 18%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(2067802..2068086%2C2067512..2067632%2C2066606..2066778));owner=coffea | |
| 13734 chr1 manual_curation exon 29097499 29097893 . - . Parent=GSCOCT00024142001 | |
| 13735 chr1 manual_curation exon 29098627 29098747 . - . Parent=GSCOCT00024142001 | |
| 13736 chr1 manual_curation exon 29098917 29099274 . - . Parent=GSCOCT00024142001 | |
| 13737 chr1 manual_curation CDS 29097721 29097893 . - 1 Parent=GSCOCT00024142001 | |
| 13738 chr1 manual_curation CDS 29098627 29098747 . - 0 Parent=GSCOCT00024142001 | |
| 13739 chr1 manual_curation CDS 29098917 29099201 . - 0 Parent=GSCOCT00024142001 | |
| 13740 chr1 manual_curation gene 29099989 29105718 . + . ID=GSCOCG00024143001;Name=Cc01_g10470 | |
| 13741 chr1 manual_curation mRNA 29099989 29105718 . + . ID=GSCOCT00024143001;Parent=GSCOCG00024143001;Name=Cc01_g10470 | |
| 13742 chr1 manual_curation polypeptide 29100936 29105064 . + . ID=GSCOCP00024143001;Dbxref=InterPro:IPR019410,PFAM:PF10294,SwissProt:A4IGU3,SwissProt:Q8C436,SwissProt:Q9H867,TAIR:AT1G08125.2,TAIR:AT1G73320.1,TAIR:AT5G44170.1,TrEMBL:B9SCI5,TrEMBL:D7SNC7,TrEMBL:D7TU89;Derives_from=GSCOCT00024143001;Name=Cc01_g10470;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Methyltransferase-like protein 21D,CC_functional_completeness:modules,CC_gene:Mettl21d,CC_gene:METTL21D,CC_gene:mettl21a;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024143001~ Putative Methyltransferase-like protein 21D~ Mettl21d~ modules;original_location=join(2069821..2069834%2C2071139..2071205%2C2071707..2071772%2C2072012..2072105%2C2072196..2072312%2C2072540..2072640%2C2072922..2072996%2C2073091..2073183%2C2073635..2073949);owner=coffea | |
| 13743 chr1 manual_curation exon 29105161 29105718 . + . Parent=GSCOCT00024143001 | |
| 13744 chr1 manual_curation exon 29099989 29100949 . + . Parent=GSCOCT00024143001 | |
| 13745 chr1 manual_curation exon 29102254 29102320 . + . Parent=GSCOCT00024143001 | |
| 13746 chr1 manual_curation exon 29102822 29102887 . + . Parent=GSCOCT00024143001 | |
| 13747 chr1 manual_curation exon 29103127 29103220 . + . Parent=GSCOCT00024143001 | |
| 13748 chr1 manual_curation exon 29103311 29103427 . + . Parent=GSCOCT00024143001 | |
| 13749 chr1 manual_curation exon 29103655 29103755 . + . Parent=GSCOCT00024143001 | |
| 13750 chr1 manual_curation exon 29104037 29104111 . + . Parent=GSCOCT00024143001 | |
| 13751 chr1 manual_curation exon 29104206 29104298 . + . Parent=GSCOCT00024143001 | |
| 13752 chr1 manual_curation exon 29104750 29105074 . + . Parent=GSCOCT00024143001 | |
| 13753 chr1 manual_curation CDS 29100936 29100949 . + 0 Parent=GSCOCT00024143001 | |
| 13754 chr1 manual_curation CDS 29102254 29102320 . + 2 Parent=GSCOCT00024143001 | |
| 13755 chr1 manual_curation CDS 29102822 29102887 . + 0 Parent=GSCOCT00024143001 | |
| 13756 chr1 manual_curation CDS 29103127 29103220 . + 0 Parent=GSCOCT00024143001 | |
| 13757 chr1 manual_curation CDS 29103311 29103427 . + 1 Parent=GSCOCT00024143001 | |
| 13758 chr1 manual_curation CDS 29103655 29103755 . + 1 Parent=GSCOCT00024143001 | |
| 13759 chr1 manual_curation CDS 29104037 29104111 . + 0 Parent=GSCOCT00024143001 | |
| 13760 chr1 manual_curation CDS 29104206 29104298 . + 0 Parent=GSCOCT00024143001 | |
| 13761 chr1 manual_curation CDS 29104750 29105064 . + 0 Parent=GSCOCT00024143001 | |
| 13762 chr1 manual_curation gene 29105854 29109487 . - . ID=GSCOCG00024144001;Name=Cc01_g10480 | |
| 13763 chr1 manual_curation mRNA 29105854 29109487 . - . ID=GSCOCT00024144001;Parent=GSCOCG00024144001;Name=Cc01_g10480 | |
| 13764 chr1 manual_curation polypeptide 29106010 29108983 . - . ID=GSCOCP00024144001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR000933,InterPro:IPR008979,InterPro:IPR013781,InterPro:IPR017853,PANTHER:PTHR10030,PFAM:PF01120,SMART:SM00812,SUPERFAMILY:SSF49785,SUPERFAMILY:SSF51445,SwissProt:Q7XUR3,SwissProt:Q8GW72,TAIR:AT2G28100.1,TrEMBL:B9HQN0,TrEMBL:B9SCI4,TrEMBL:F6GW96;Derives_from=GSCOCT00024144001;Name=Cc01_g10480;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004560,GO:0005975,GO:0043169,CC_EC_number:3.2.1.51,PRODUCT:Alpha-L-fucosidase 1,CC_functional_completeness:complete,CC_gene:FUC1,CC_gene:Os04g0560400;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024144001~ Alpha-L-fucosidase 1~ FUC1~ complete;original_location=complement(join(2077474..2077868%2C2076575..2076811%2C2074895..2075648));owner=coffea | |
| 13765 chr1 manual_curation exon 29105854 29106763 . - . Parent=GSCOCT00024144001 | |
| 13766 chr1 manual_curation exon 29107690 29107926 . - . Parent=GSCOCT00024144001 | |
| 13767 chr1 manual_curation exon 29108589 29109487 . - . Parent=GSCOCT00024144001 | |
| 13768 chr1 manual_curation CDS 29106010 29106763 . - 2 Parent=GSCOCT00024144001 | |
| 13769 chr1 manual_curation CDS 29107690 29107926 . - 2 Parent=GSCOCT00024144001 | |
| 13770 chr1 manual_curation CDS 29108589 29108983 . - 0 Parent=GSCOCT00024144001 | |
| 13771 chr1 manual_curation gene 29124800 29126480 . + . ID=GSCOCG00024145001;Name=Cc01_g10490 | |
| 13772 chr1 manual_curation mRNA 29124800 29126480 . + . ID=GSCOCT00024145001;Parent=GSCOCG00024145001;Name=Cc01_g10490 | |
| 13773 chr1 manual_curation polypeptide 29124800 29126480 . + . ID=GSCOCP00024145001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001005,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR014778,InterPro:IPR015495,InterPro:IPR017930,PANTHER:PTHR10641,PFAM:PF00249,PROFILE:PS51294,SMART:SM00717,SUPERFAMILY:SSF46689,SwissProt:Q9FG68,SwissProt:Q9M2Y9,SwissProt:Q9SJL7,TAIR:AT3G49690.1,TAIR:AT5G65790.1,TrEMBL:B9HQM8,TrEMBL:B9N863,TrEMBL:F6GW97;Derives_from=GSCOCT00024145001;Name=Cc01_g10490;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Predicted protein,CC_functional_completeness:complete,CC_gene:RAX3,CC_gene:RAX1,CC_gene:RAX2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024145001~ Predicted protein~ RAX3~ complete;original_location=join(2093685..2093820%2C2093959..2094088%2C2094540..2095365);owner=coffea | |
| 13774 chr1 manual_curation exon 29124800 29124935 . + . Parent=GSCOCT00024145001 | |
| 13775 chr1 manual_curation exon 29125074 29125203 . + . Parent=GSCOCT00024145001 | |
| 13776 chr1 manual_curation exon 29125655 29126480 . + . Parent=GSCOCT00024145001 | |
| 13777 chr1 manual_curation CDS 29124800 29124935 . + 0 Parent=GSCOCT00024145001 | |
| 13778 chr1 manual_curation CDS 29125074 29125203 . + 1 Parent=GSCOCT00024145001 | |
| 13779 chr1 manual_curation CDS 29125655 29126480 . + 2 Parent=GSCOCT00024145001 | |
| 13780 chr1 manual_curation gene 29133240 29137995 . - . ID=GSCOCG00024146001;Name=Cc01_g10500 | |
| 13781 chr1 manual_curation mRNA 29133240 29137995 . - . ID=GSCOCT00024146001;Parent=GSCOCG00024146001;Name=Cc01_g10500 | |
| 13782 chr1 manual_curation polypeptide 29134155 29137878 . - . ID=GSCOCP00024146001;Dbxref=InterPro:IPR004360,InterPro:IPR004361,InterPro:IPR018146,PFAM:PF00903,PROSITE:PS00934,PROSITE:PS00935,SwissProt:O04885,SwissProt:O49818,SwissProt:Q9ZS21,TAIR:AT1G08110.4,TAIR:AT1G11840.6,TAIR:AT1G67280.1,TIGRFAMs:TIGR00068,TrEMBL:A5A8J4,TrEMBL:B9SCI1,TrEMBL:F2DAY3;Derives_from=GSCOCT00024146001;Name=Cc01_g10500;Ontology_term=CC_evidence_code:ISS,GO:0004462,GO:0046872,CC_EC_number:4.4.1.5,PRODUCT:Lactoylglutathione lyase,CC_functional_completeness:modules,CC_gene:GLY,CC_gene:GLXI;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024146001~ Lactoylglutathione lyase~ GLY~ modules;original_location=complement(join(2106635..2106763%2C2106358..2106489%2C2106153..2106214%2C2105584..2105644%2C2105339..2105418%2C2105140..2105210%2C2104726..2104815%2C2103040..2103140));owner=coffea | |
| 13783 chr1 manual_curation exon 29133240 29134255 . - . Parent=GSCOCT00024146001 | |
| 13784 chr1 manual_curation exon 29135841 29135930 . - . Parent=GSCOCT00024146001 | |
| 13785 chr1 manual_curation exon 29136255 29136325 . - . Parent=GSCOCT00024146001 | |
| 13786 chr1 manual_curation exon 29136454 29136533 . - . Parent=GSCOCT00024146001 | |
| 13787 chr1 manual_curation exon 29136699 29136759 . - . Parent=GSCOCT00024146001 | |
| 13788 chr1 manual_curation exon 29137268 29137329 . - . Parent=GSCOCT00024146001 | |
| 13789 chr1 manual_curation exon 29137473 29137604 . - . Parent=GSCOCT00024146001 | |
| 13790 chr1 manual_curation exon 29137750 29137995 . - . Parent=GSCOCT00024146001 | |
| 13791 chr1 manual_curation CDS 29134155 29134255 . - 1 Parent=GSCOCT00024146001 | |
| 13792 chr1 manual_curation CDS 29135841 29135930 . - 1 Parent=GSCOCT00024146001 | |
| 13793 chr1 manual_curation CDS 29136255 29136325 . - 2 Parent=GSCOCT00024146001 | |
| 13794 chr1 manual_curation CDS 29136454 29136533 . - 0 Parent=GSCOCT00024146001 | |
| 13795 chr1 manual_curation CDS 29136699 29136759 . - 2 Parent=GSCOCT00024146001 | |
| 13796 chr1 manual_curation CDS 29137268 29137329 . - 0 Parent=GSCOCT00024146001 | |
| 13797 chr1 manual_curation CDS 29137473 29137604 . - 0 Parent=GSCOCT00024146001 | |
| 13798 chr1 manual_curation CDS 29137750 29137878 . - 0 Parent=GSCOCT00024146001 | |
| 13799 chr1 manual_curation gene 29143429 29148229 . + . ID=GSCOCG00024147001;Name=Cc01_g10510 | |
| 13800 chr1 manual_curation mRNA 29143429 29148229 . + . ID=GSCOCT00024147001;Parent=GSCOCG00024147001;Name=Cc01_g10510 | |
| 13801 chr1 manual_curation polypeptide 29144630 29147854 . + . ID=GSCOCP00024147001;Dbxref=InterPro:IPR000873,PFAM:PF00501,SwissProt:Q0DV32,SwissProt:Q84P21,SwissProt:Q9M0X9,TAIR:AT1G20510.1,TAIR:AT4G05160.1,TAIR:AT4G19010.1,TrEMBL:B9H3P7,TrEMBL:B9SCH9,TrEMBL:H2BER4;Derives_from=GSCOCT00024147001;Name=Cc01_g10510;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,CC_EC_number:1.13.12.7,PRODUCT:4-coumarate--CoA ligase-like 7,CC_functional_completeness:fragment,CC_gene:4CLL7,CC_gene:4CLL1,CC_gene:4CLL5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024147001~ 4-coumarate--CoA ligase-like 7~ 4CLL7~ fragment;original_location=join(2113515..2113559%2C2114607..2114796%2C2115359..2115504%2C2115662..2115729%2C2115835..2115937%2C2116626..2116739);owner=coffea | |
| 13802 chr1 manual_curation exon 29143429 29144674 . + . Parent=GSCOCT00024147001 | |
| 13803 chr1 manual_curation exon 29145722 29145911 . + . Parent=GSCOCT00024147001 | |
| 13804 chr1 manual_curation exon 29146474 29146619 . + . Parent=GSCOCT00024147001 | |
| 13805 chr1 manual_curation exon 29146777 29146844 . + . Parent=GSCOCT00024147001 | |
| 13806 chr1 manual_curation exon 29146950 29147052 . + . Parent=GSCOCT00024147001 | |
| 13807 chr1 manual_curation exon 29147741 29148229 . + . Parent=GSCOCT00024147001 | |
| 13808 chr1 manual_curation CDS 29144630 29144674 . + 0 Parent=GSCOCT00024147001 | |
| 13809 chr1 manual_curation CDS 29145722 29145911 . + 0 Parent=GSCOCT00024147001 | |
| 13810 chr1 manual_curation CDS 29146474 29146619 . + 1 Parent=GSCOCT00024147001 | |
| 13811 chr1 manual_curation CDS 29146777 29146844 . + 0 Parent=GSCOCT00024147001 | |
| 13812 chr1 manual_curation CDS 29146950 29147052 . + 2 Parent=GSCOCT00024147001 | |
| 13813 chr1 manual_curation CDS 29147741 29147854 . + 0 Parent=GSCOCT00024147001 | |
| 13814 chr1 manual_curation gene 29166226 29169722 . + . ID=GSCOCG00024150001;Name=Cc01_g10520 | |
| 13815 chr1 manual_curation mRNA 29166226 29169722 . + . ID=GSCOCT00024150001;Parent=GSCOCG00024150001;Name=Cc01_g10520 | |
| 13816 chr1 manual_curation polypeptide 29166958 29169030 . + . ID=GSCOCP00024150001;Dbxref=InterPro:IPR006121,PFAM:PF00403,PROFILE:PS50846,SUPERFAMILY:SSF55008,TAIR:AT2G36950.1,TAIR:AT5G03380.1,TAIR:AT5G60800.2,TrEMBL:D7SND2,TrEMBL:I1LL17,TrEMBL:I1LR70;Derives_from=GSCOCT00024150001;Name=Cc01_g10520;Ontology_term=CC_evidence_code:ISS,GO:0030001,GO:0046872,CC_EC_number:missing_EC_number,PRODUCT:Putative Heavy metal transport/detoxification superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024150001~ Putative Heavy metal transport/detoxification superfamily protein~ unknown_gene~ complete;original_location=join(2135843..2135851%2C2136032..2136239%2C2136552..2136805%2C2137335..2137422%2C2137518..2137915);owner=coffea | |
| 13817 chr1 manual_curation exon 29166226 29166966 . + . Parent=GSCOCT00024150001 | |
| 13818 chr1 manual_curation exon 29167147 29167354 . + . Parent=GSCOCT00024150001 | |
| 13819 chr1 manual_curation exon 29167667 29167920 . + . Parent=GSCOCT00024150001 | |
| 13820 chr1 manual_curation exon 29168450 29168537 . + . Parent=GSCOCT00024150001 | |
| 13821 chr1 manual_curation exon 29168633 29169722 . + . Parent=GSCOCT00024150001 | |
| 13822 chr1 manual_curation CDS 29166958 29166966 . + 0 Parent=GSCOCT00024150001 | |
| 13823 chr1 manual_curation CDS 29167147 29167354 . + 0 Parent=GSCOCT00024150001 | |
| 13824 chr1 manual_curation CDS 29167667 29167920 . + 1 Parent=GSCOCT00024150001 | |
| 13825 chr1 manual_curation CDS 29168450 29168537 . + 0 Parent=GSCOCT00024150001 | |
| 13826 chr1 manual_curation CDS 29168633 29169030 . + 1 Parent=GSCOCT00024150001 | |
| 13827 chr1 manual_curation gene 29176843 29180565 . - . ID=GSCOCG00024151001;Name=Cc01_g10530 | |
| 13828 chr1 manual_curation mRNA 29176843 29180565 . - . ID=GSCOCT00024151001;Parent=GSCOCG00024151001;Name=Cc01_g10530 | |
| 13829 chr1 manual_curation polypeptide 29177025 29177522 . - . ID=GSCOCP00024151001;Dbxref=InterPro:IPR005484,PFAM:PF00861,TAIR:AT3G45020.1,TrEMBL:B9N857,TrEMBL:B9SCH7,TrEMBL:D7SND3;Derives_from=GSCOCT00024151001;Name=Cc01_g10530;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:Ribosomal L18p/L5e family protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024151001~ Ribosomal L18p/L5e family protein~ unknown_gene~ modules;original_location=complement(join(2146029..2146407%2C2145910..2145977));owner=coffea | |
| 13830 chr1 manual_curation exon 29180183 29180267 . - . Parent=GSCOCT00024151001 | |
| 13831 chr1 manual_curation exon 29180401 29180565 . - . Parent=GSCOCT00024151001 | |
| 13832 chr1 manual_curation exon 29176843 29177092 . - . Parent=GSCOCT00024151001 | |
| 13833 chr1 manual_curation exon 29177144 29177540 . - . Parent=GSCOCT00024151001 | |
| 13834 chr1 manual_curation CDS 29177025 29177092 . - 1 Parent=GSCOCT00024151001 | |
| 13835 chr1 manual_curation CDS 29177144 29177522 . - 0 Parent=GSCOCT00024151001 | |
| 13836 chr1 manual_curation gene 29182195 29188314 . + . ID=GSCOCG00024152001;Name=Cc01_g10540 | |
| 13837 chr1 manual_curation mRNA 29182195 29188314 . + . ID=GSCOCT00024152001;Parent=GSCOCG00024152001;Name=Cc01_g10540 | |
| 13838 chr1 manual_curation polypeptide 29183409 29187838 . + . ID=GSCOCP00024152001;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR017871,PFAM:PF00005,PROFILE:PS50893,PROSITE:PS00211,SMART:SM00382,SwissProt:Q99LE6,SwissProt:Q9FJH6,SwissProt:Q9UG63,TAIR:AT1G64550.1,TAIR:AT3G54540.1,TAIR:AT5G60790.1,TrEMBL:F6GWA0;Derives_from=GSCOCT00024152001;Name=Cc01_g10540;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0016887,GO:0017111,CC_EC_number:3.6.3.41,CC_EC_number:3.6.3.41,PRODUCT:ABC transporter F family member 1,CC_functional_completeness:complete,CC_gene:ABCF1,CC_gene:ABCF2,CC_gene:Abcf2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024152001~ ABC transporter F family member 1~ ABCF1~ complete;original_location=join(2152294..2152542%2C2154628..2154701%2C2154777..2155222%2C2155666..2156723);owner=coffea | |
| 13839 chr1 manual_curation exon 29182195 29183657 . + . Parent=GSCOCT00024152001 | |
| 13840 chr1 manual_curation exon 29185743 29185816 . + . Parent=GSCOCT00024152001 | |
| 13841 chr1 manual_curation exon 29185892 29186337 . + . Parent=GSCOCT00024152001 | |
| 13842 chr1 manual_curation exon 29186781 29188314 . + . Parent=GSCOCT00024152001 | |
| 13843 chr1 manual_curation CDS 29183409 29183657 . + 0 Parent=GSCOCT00024152001 | |
| 13844 chr1 manual_curation CDS 29185743 29185816 . + 0 Parent=GSCOCT00024152001 | |
| 13845 chr1 manual_curation CDS 29185892 29186337 . + 2 Parent=GSCOCT00024152001 | |
| 13846 chr1 manual_curation CDS 29186781 29187838 . + 1 Parent=GSCOCT00024152001 | |
| 13847 chr1 manual_curation gene 29192020 29192451 . - . ID=GSCOCG00024153001;Name=Cc01_g10550 | |
| 13848 chr1 manual_curation mRNA 29192020 29192451 . - . ID=GSCOCT00024153001;Parent=GSCOCG00024153001;Name=Cc01_g10550 | |
| 13849 chr1 manual_curation polypeptide 29192020 29192451 . - . ID=GSCOCP00024153001;Dbxref=InterPro:IPR003676,PFAM:PF02519,TAIR:AT1G75580.1,TAIR:AT2G28085.1,TAIR:AT3G09870.1,TrEMBL:B9HUI7,TrEMBL:D7SND5,TrEMBL:F6GWA1;Derives_from=GSCOCT00024153001;Name=Cc01_g10550;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:SAUR-like auxin-responsive protein family,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024153001~ SAUR-like auxin-responsive protein family~ unknown_gene~ modules;original_location=complement(2160905..2161336);owner=coffea | |
| 13850 chr1 manual_curation exon 29192020 29192451 . - . Parent=GSCOCT00024153001 | |
| 13851 chr1 manual_curation CDS 29192020 29192451 . - 0 Parent=GSCOCT00024153001 | |
| 13852 chr1 manual_curation gene 29207882 29215801 . - . ID=GSCOCG00024155001;Name=Cc01_g10560 | |
| 13853 chr1 manual_curation mRNA 29207882 29215801 . - . ID=GSCOCT00024155001;Parent=GSCOCG00024155001;Name=Cc01_g10560 | |
| 13854 chr1 manual_curation polypeptide 29208377 29215637 . - . ID=GSCOCP00024155001;Dbxref=SwissProt:Q58CR4,SwissProt:Q8R2Y3,SwissProt:Q9UPQ8,TAIR:AT3G45040.1,TrEMBL:B9SCH4,TrEMBL:D7SND7,TrEMBL:G8A151;Derives_from=GSCOCT00024155001;Name=Cc01_g10560;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.7.1.108,PRODUCT:phosphatidate cytidylyltransferase family protein,CC_functional_completeness:complete,CC_gene:Dolk,CC_gene:DOLK;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024155001~ phosphatidate cytidylyltransferase family protein~ Dolk~ complete;original_location=complement(join(2184317..2184522%2C2183927..2184039%2C2182810..2183016%2C2182513..2182617%2C2181526..2181596%2C2181341..2181421%2C2181032..2181246%2C2179821..2180010%2C2179657..2179722%2C2178914..2179002%2C2178709..2178823%2C2177877..2177928%2C2177697..2177797%2C2177262..2177375));owner=coffea | |
| 13855 chr1 manual_curation exon 29207882 29208490 . - . Parent=GSCOCT00024155001 | |
| 13856 chr1 manual_curation exon 29208812 29208912 . - . Parent=GSCOCT00024155001 | |
| 13857 chr1 manual_curation exon 29208992 29209043 . - . Parent=GSCOCT00024155001 | |
| 13858 chr1 manual_curation exon 29209824 29209938 . - . Parent=GSCOCT00024155001 | |
| 13859 chr1 manual_curation exon 29210029 29210117 . - . Parent=GSCOCT00024155001 | |
| 13860 chr1 manual_curation exon 29210772 29210837 . - . Parent=GSCOCT00024155001 | |
| 13861 chr1 manual_curation exon 29210936 29211125 . - . Parent=GSCOCT00024155001 | |
| 13862 chr1 manual_curation exon 29212147 29212361 . - . Parent=GSCOCT00024155001 | |
| 13863 chr1 manual_curation exon 29212456 29212536 . - . Parent=GSCOCT00024155001 | |
| 13864 chr1 manual_curation exon 29212641 29212711 . - . Parent=GSCOCT00024155001 | |
| 13865 chr1 manual_curation exon 29213628 29213732 . - . Parent=GSCOCT00024155001 | |
| 13866 chr1 manual_curation exon 29213925 29214131 . - . Parent=GSCOCT00024155001 | |
| 13867 chr1 manual_curation exon 29215042 29215154 . - . Parent=GSCOCT00024155001 | |
| 13868 chr1 manual_curation exon 29215432 29215801 . - . Parent=GSCOCT00024155001 | |
| 13869 chr1 manual_curation CDS 29208377 29208490 . - 0 Parent=GSCOCT00024155001 | |
| 13870 chr1 manual_curation CDS 29208812 29208912 . - 1 Parent=GSCOCT00024155001 | |
| 13871 chr1 manual_curation CDS 29208992 29209043 . - 0 Parent=GSCOCT00024155001 | |
| 13872 chr1 manual_curation CDS 29209824 29209938 . - 2 Parent=GSCOCT00024155001 | |
| 13873 chr1 manual_curation CDS 29210029 29210117 . - 0 Parent=GSCOCT00024155001 | |
| 13874 chr1 manual_curation CDS 29210772 29210837 . - 0 Parent=GSCOCT00024155001 | |
| 13875 chr1 manual_curation CDS 29210936 29211125 . - 2 Parent=GSCOCT00024155001 | |
| 13876 chr1 manual_curation CDS 29212147 29212361 . - 0 Parent=GSCOCT00024155001 | |
| 13877 chr1 manual_curation CDS 29212456 29212536 . - 0 Parent=GSCOCT00024155001 | |
| 13878 chr1 manual_curation CDS 29212641 29212711 . - 1 Parent=GSCOCT00024155001 | |
| 13879 chr1 manual_curation CDS 29213628 29213732 . - 1 Parent=GSCOCT00024155001 | |
| 13880 chr1 manual_curation CDS 29213925 29214131 . - 1 Parent=GSCOCT00024155001 | |
| 13881 chr1 manual_curation CDS 29215042 29215154 . - 2 Parent=GSCOCT00024155001 | |
| 13882 chr1 manual_curation CDS 29215432 29215637 . - 0 Parent=GSCOCT00024155001 | |
| 13883 chr1 manual_curation gene 29218143 29219865 . + . ID=GSCOCG00024156001;Name=Cc01_g10570 | |
| 13884 chr1 manual_curation mRNA 29218143 29219865 . + . ID=GSCOCT00024156001;Parent=GSCOCG00024156001;Name=Cc01_g10570 | |
| 13885 chr1 manual_curation polypeptide 29218143 29219865 . + . ID=GSCOCP00024156001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,PROSITE:PS00375,SwissProt:Q9SJL0,SwissProt:Q9SK82,SwissProt:Q9ZUV0,TAIR:AT1G22400.1,TAIR:AT2G28080.1,TAIR:AT2G36970.1,TrEMBL:B9HQM3,TrEMBL:B9SCH3,TrEMBL:F6GWA2;Derives_from=GSCOCT00024156001;Name=Cc01_g10570;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:UDP-glycosyltransferase 86A2,CC_functional_completeness:complete,CC_gene:UGT86A2,CC_gene:UGT86A1,CC_gene:UGT85A1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024156001~ UDP-glycosyltransferase 86A2~ UGT86A2~ complete;original_location=join(2187028..2187550%2C2187822..2188750);owner=coffea | |
| 13886 chr1 manual_curation exon 29218143 29218665 . + . Parent=GSCOCT00024156001 | |
| 13887 chr1 manual_curation exon 29218937 29219865 . + . Parent=GSCOCT00024156001 | |
| 13888 chr1 manual_curation CDS 29218143 29218665 . + 0 Parent=GSCOCT00024156001 | |
| 13889 chr1 manual_curation CDS 29218937 29219865 . + 1 Parent=GSCOCT00024156001 | |
| 13890 chr1 manual_curation gene 29224038 29226452 . + . ID=GSCOCG00024157001;Name=Cc01_g10580 | |
| 13891 chr1 manual_curation mRNA 29224038 29226452 . + . ID=GSCOCT00024157001;Parent=GSCOCG00024157001;Name=Cc01_g10580 | |
| 13892 chr1 manual_curation polypeptide 29224184 29225735 . + . ID=GSCOCP00024157001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,PROSITE:PS00375,SwissProt:Q9LME8,SwissProt:Q9SJL0,SwissProt:Q9ZUV0,TAIR:AT1G22340.1,TAIR:AT2G28080.1,TAIR:AT2G36970.1,TrEMBL:B9HQM3,TrEMBL:B9SCH3,TrEMBL:F6GWA2;Derives_from=GSCOCT00024157001;Name=Cc01_g10580;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:UDP-glycosyltransferase 86A1,CC_functional_completeness:complete,CC_gene:UGT86A1,CC_gene:UGT86A2,CC_gene:UGT85A7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024157001~ UDP-glycosyltransferase 86A1~ UGT86A1~ complete;original_location=join(2193069..2193588%2C2193692..2194620);owner=coffea | |
| 13893 chr1 manual_curation exon 29224038 29224703 . + . Parent=GSCOCT00024157001 | |
| 13894 chr1 manual_curation exon 29224807 29226452 . + . Parent=GSCOCT00024157001 | |
| 13895 chr1 manual_curation CDS 29224184 29224703 . + 0 Parent=GSCOCT00024157001 | |
| 13896 chr1 manual_curation CDS 29224807 29225735 . + 1 Parent=GSCOCT00024157001 | |
| 13897 chr1 manual_curation gene 29226558 29234991 . - . ID=GSCOCG00024158001;Name=Cc01_g10590 | |
| 13898 chr1 manual_curation mRNA 29226558 29234991 . - . ID=GSCOCT00024158001;Parent=GSCOCG00024158001;Name=Cc01_g10590 | |
| 13899 chr1 manual_curation polypeptide 29227500 29234041 . - . ID=GSCOCP00024158001;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR013525,PFAM:PF00005,PFAM:PF01061,PROFILE:PS50893,SMART:SM00382,SwissProt:Q8RWI9,SwissProt:Q8RXN0,SwissProt:Q9ZUU9,TAIR:AT1G17840.1,TAIR:AT2G28070.1,TAIR:AT3G21090.1,TrEMBL:B9SCH2,TrEMBL:D7SNE0,TrEMBL:I1M4I0;Derives_from=GSCOCT00024158001;Name=Cc01_g10590;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0016020,GO:0016887,GO:0017111,CC_EC_number:3.6.3.28,CC_EC_number:3.6.3.28,PRODUCT:ABC transporter G family member 3,CC_functional_completeness:complete,CC_gene:ABCG3,CC_gene:ABCG11,CC_gene:ABCG15;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024158001~ ABC transporter G family member 3~ ABCG3~ complete;original_location=complement(join(2202455..2202926%2C2202266..2202345%2C2201379..2201665%2C2201000..2201171%2C2200137..2200250%2C2199594..2199722%2C2198685..2198876%2C2197906..2197992%2C2196800..2197072%2C2196385..2196501));owner=coffea | |
| 13900 chr1 manual_curation exon 29234816 29234991 . - . Parent=GSCOCT00024158001 | |
| 13901 chr1 manual_curation exon 29226558 29227616 . - . Parent=GSCOCT00024158001 | |
| 13902 chr1 manual_curation exon 29227915 29228187 . - . Parent=GSCOCT00024158001 | |
| 13903 chr1 manual_curation exon 29229021 29229107 . - . Parent=GSCOCT00024158001 | |
| 13904 chr1 manual_curation exon 29229800 29229991 . - . Parent=GSCOCT00024158001 | |
| 13905 chr1 manual_curation exon 29230709 29230837 . - . Parent=GSCOCT00024158001 | |
| 13906 chr1 manual_curation exon 29231252 29231365 . - . Parent=GSCOCT00024158001 | |
| 13907 chr1 manual_curation exon 29232115 29232286 . - . Parent=GSCOCT00024158001 | |
| 13908 chr1 manual_curation exon 29232494 29232780 . - . Parent=GSCOCT00024158001 | |
| 13909 chr1 manual_curation exon 29233381 29233460 . - . Parent=GSCOCT00024158001 | |
| 13910 chr1 manual_curation exon 29233570 29234178 . - . Parent=GSCOCT00024158001 | |
| 13911 chr1 manual_curation CDS 29227500 29227616 . - 0 Parent=GSCOCT00024158001 | |
| 13912 chr1 manual_curation CDS 29227915 29228187 . - 0 Parent=GSCOCT00024158001 | |
| 13913 chr1 manual_curation CDS 29229021 29229107 . - 0 Parent=GSCOCT00024158001 | |
| 13914 chr1 manual_curation CDS 29229800 29229991 . - 0 Parent=GSCOCT00024158001 | |
| 13915 chr1 manual_curation CDS 29230709 29230837 . - 0 Parent=GSCOCT00024158001 | |
| 13916 chr1 manual_curation CDS 29231252 29231365 . - 0 Parent=GSCOCT00024158001 | |
| 13917 chr1 manual_curation CDS 29232115 29232286 . - 2 Parent=GSCOCT00024158001 | |
| 13918 chr1 manual_curation CDS 29232494 29232780 . - 0 Parent=GSCOCT00024158001 | |
| 13919 chr1 manual_curation CDS 29233381 29233460 . - 1 Parent=GSCOCT00024158001 | |
| 13920 chr1 manual_curation CDS 29233570 29234041 . - 0 Parent=GSCOCT00024158001 | |
| 13921 chr1 manual_curation gene 29254179 29259500 . + . ID=GSCOCG00024160001;Name=Cc01_g10600 | |
| 13922 chr1 manual_curation mRNA 29254179 29259500 . + . ID=GSCOCT00024160001;Parent=GSCOCG00024160001;Name=Cc01_g10600 | |
| 13923 chr1 manual_curation polypeptide 29254326 29259232 . + . ID=GSCOCP00024160001;Dbxref=GENE3D:G3DSA:2.40.40.20,InterPro:IPR003338,InterPro:IPR003593,InterPro:IPR003959,InterPro:IPR003960,InterPro:IPR004201,InterPro:IPR005938,InterPro:IPR009010,PFAM:PF00004,PFAM:PF02359,PFAM:PF02933,PROSITE:PS00674,SMART:SM00382,SUPERFAMILY:SSF50692,SwissProt:P54774,SwissProt:Q96372,SwissProt:Q9LZF6,TAIR:AT3G09840.1,TAIR:AT3G53230.1,TAIR:AT5G03340.1,TIGRFAMs:TIGR01243,TrEMBL:B9S0I3,TrEMBL:C5MQG8,TrEMBL:Q2HZ34;Derives_from=GSCOCT00024160001;Name=Cc01_g10600;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005488,GO:0005524,GO:0016787,GO:0017111,CC_EC_number:3.6.4.3,CC_EC_number:3.6.4.3,PRODUCT:Cell division cycle protein 48 homolog,CC_functional_completeness:complete,CC_gene:CDC48,CC_gene:CAFP,CC_gene:CDC48E;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024160001~ Cell division cycle protein 48 homolog~ CDC48~ complete;original_location=join(2223211..2223239%2C2223388..2223553%2C2224147..2224375%2C2224588..2225354%2C2225454..2225675%2C2225792..2225863%2C2225970..2226251%2C2226704..2227063%2C2227827..2228117);owner=coffea | |
| 13924 chr1 manual_curation exon 29254179 29254354 . + . Parent=GSCOCT00024160001 | |
| 13925 chr1 manual_curation exon 29254503 29254668 . + . Parent=GSCOCT00024160001 | |
| 13926 chr1 manual_curation exon 29255262 29255490 . + . Parent=GSCOCT00024160001 | |
| 13927 chr1 manual_curation exon 29255703 29256469 . + . Parent=GSCOCT00024160001 | |
| 13928 chr1 manual_curation exon 29256569 29256790 . + . Parent=GSCOCT00024160001 | |
| 13929 chr1 manual_curation exon 29256907 29256978 . + . Parent=GSCOCT00024160001 | |
| 13930 chr1 manual_curation exon 29257085 29257366 . + . Parent=GSCOCT00024160001 | |
| 13931 chr1 manual_curation exon 29257819 29258178 . + . Parent=GSCOCT00024160001 | |
| 13932 chr1 manual_curation exon 29258942 29259500 . + . Parent=GSCOCT00024160001 | |
| 13933 chr1 manual_curation CDS 29254326 29254354 . + 0 Parent=GSCOCT00024160001 | |
| 13934 chr1 manual_curation CDS 29254503 29254668 . + 2 Parent=GSCOCT00024160001 | |
| 13935 chr1 manual_curation CDS 29255262 29255490 . + 0 Parent=GSCOCT00024160001 | |
| 13936 chr1 manual_curation CDS 29255703 29256469 . + 1 Parent=GSCOCT00024160001 | |
| 13937 chr1 manual_curation CDS 29256569 29256790 . + 0 Parent=GSCOCT00024160001 | |
| 13938 chr1 manual_curation CDS 29256907 29256978 . + 0 Parent=GSCOCT00024160001 | |
| 13939 chr1 manual_curation CDS 29257085 29257366 . + 0 Parent=GSCOCT00024160001 | |
| 13940 chr1 manual_curation CDS 29257819 29258178 . + 0 Parent=GSCOCT00024160001 | |
| 13941 chr1 manual_curation CDS 29258942 29259232 . + 0 Parent=GSCOCT00024160001 | |
| 13942 chr1 manual_curation gene 29266274 29268627 . + . ID=GSCOCG00024163001;Name=Cc01_g10610 | |
| 13943 chr1 manual_curation mRNA 29266274 29268627 . + . ID=GSCOCT00024163001;Parent=GSCOCG00024163001;Name=Cc01_g10610 | |
| 13944 chr1 manual_curation polypeptide 29266830 29268138 . + . ID=GSCOCP00024163001;Dbxref=TAIR:AT3G45050.2,TrEMBL:B9DG54,TrEMBL:D7LNK3,TrEMBL:F6GWA4;Derives_from=GSCOCT00024163001;Name=Cc01_g10610;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024163001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=join(2235715..2235730%2C2235893..2236104%2C2236696..2236844%2C2236936..2237023);owner=coffea | |
| 13945 chr1 manual_curation exon 29266274 29266845 . + . Parent=GSCOCT00024163001 | |
| 13946 chr1 manual_curation exon 29267008 29267219 . + . Parent=GSCOCT00024163001 | |
| 13947 chr1 manual_curation exon 29267811 29267959 . + . Parent=GSCOCT00024163001 | |
| 13948 chr1 manual_curation exon 29268051 29268627 . + . Parent=GSCOCT00024163001 | |
| 13949 chr1 manual_curation CDS 29266830 29266845 . + 0 Parent=GSCOCT00024163001 | |
| 13950 chr1 manual_curation CDS 29267008 29267219 . + 1 Parent=GSCOCT00024163001 | |
| 13951 chr1 manual_curation CDS 29267811 29267959 . + 0 Parent=GSCOCT00024163001 | |
| 13952 chr1 manual_curation CDS 29268051 29268138 . + 2 Parent=GSCOCT00024163001 | |
| 13953 chr1 manual_curation gene 29272896 29274848 . - . ID=GSCOCG00024164001;Name=Cc01_g10620 | |
| 13954 chr1 manual_curation mRNA 29272896 29274848 . - . ID=GSCOCT00024164001;Parent=GSCOCG00024164001;Name=Cc01_g10620 | |
| 13955 chr1 manual_curation polypeptide 29272896 29274848 . - . ID=GSCOCP00024164001;Dbxref=InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,PFAM:PF07690,PROFILE:PS50850,SUPERFAMILY:SSF103473,SwissProt:O82811,SwissProt:Q9FJH7,SwissProt:Q9FJH8,TAIR:AT1G08090.1,TAIR:AT5G60770.1,TAIR:AT5G60780.1,TrEMBL:F6GWA5,TrEMBL:Q76IH8,TrEMBL:Q76IJ7;Derives_from=GSCOCT00024164001;Name=Cc01_g10620;Ontology_term=CC_evidence_code:ISS,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:High affinity nitrate transporter 2.4,CC_functional_completeness:complete,CC_gene:NRT2.4,CC_gene:NRT2.1,CC_gene:NRT2.3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024164001~ High affinity nitrate transporter 2.4~ NRT2.4~ complete;original_location=complement(join(2242921..2243733%2C2242546..2242661%2C2241781..2242450));owner=coffea | |
| 13956 chr1 manual_curation exon 29272896 29273565 . - . Parent=GSCOCT00024164001 | |
| 13957 chr1 manual_curation exon 29273661 29273776 . - . Parent=GSCOCT00024164001 | |
| 13958 chr1 manual_curation exon 29274036 29274848 . - . Parent=GSCOCT00024164001 | |
| 13959 chr1 manual_curation CDS 29272896 29273565 . - 2 Parent=GSCOCT00024164001 | |
| 13960 chr1 manual_curation CDS 29273661 29273776 . - 0 Parent=GSCOCT00024164001 | |
| 13961 chr1 manual_curation CDS 29274036 29274848 . - 0 Parent=GSCOCT00024164001 | |
| 13962 chr1 manual_curation gene 29284661 29285221 . - . ID=GSCOCG00024165001;Name=Cc01_g10630 | |
| 13963 chr1 manual_curation mRNA 29284661 29285221 . - . ID=GSCOCT00024165001;Parent=GSCOCG00024165001;Name=Cc01_g10630 | |
| 13964 chr1 manual_curation polypeptide 29284661 29285221 . - . ID=GSCOCP00024165001;Dbxref=SwissProt:O82811,SwissProt:Q9FJH8,SwissProt:Q9LMZ9,TAIR:AT1G08090.1,TAIR:AT1G08100.1,TAIR:AT5G60770.1,TrEMBL:B9HQL9,TrEMBL:B9HQM0,TrEMBL:Q5K410;Derives_from=GSCOCT00024165001;Name=Cc01_g10630;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:NRT2.4,CC_gene:NRT2.1,CC_gene:NRT2.2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024165001~ Hypothetical protein~ NRT2.4~ missing_functional_completeness;original_location=complement(2253546..2254106);owner=coffea | |
| 13965 chr1 manual_curation exon 29284661 29285221 . - . Parent=GSCOCT00024165001 | |
| 13966 chr1 manual_curation CDS 29284661 29285221 . - 0 Parent=GSCOCT00024165001 | |
| 13967 chr1 manual_curation gene 29287969 29289784 . - . ID=GSCOCG00024167001;Name=Cc01_g10640 | |
| 13968 chr1 manual_curation mRNA 29287969 29289784 . - . ID=GSCOCT00024167001;Parent=GSCOCG00024167001;Name=Cc01_g10640 | |
| 13969 chr1 manual_curation polypeptide 29287969 29289784 . - . ID=GSCOCP00024167001;Dbxref=InterPro:IPR011701,InterPro:IPR016196,PFAM:PF07690,SUPERFAMILY:SSF103473,SwissProt:O82811,SwissProt:Q9FJH8,SwissProt:Q9LMZ9,TAIR:AT1G08090.1,TAIR:AT1G08100.1,TAIR:AT5G60770.1,TrEMBL:F6GWA5,TrEMBL:O04431,TrEMBL:Q76IJ7;Derives_from=GSCOCT00024167001;Name=Cc01_g10640;Ontology_term=CC_evidence_code:ISS,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:High-affinity nitrate transporter 2.1,CC_functional_completeness:complete,CC_gene:NRT2.1,CC_gene:NRT2.4,CC_gene:NRT2.2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024167001~ High-affinity nitrate transporter 2.1~ NRT2.1~ complete;original_location=complement(join(2257860..2258669%2C2257631..2257746%2C2256854..2257520));owner=coffea | |
| 13970 chr1 manual_curation exon 29287969 29288635 . - . Parent=GSCOCT00024167001 | |
| 13971 chr1 manual_curation exon 29288746 29288861 . - . Parent=GSCOCT00024167001 | |
| 13972 chr1 manual_curation exon 29288975 29289784 . - . Parent=GSCOCT00024167001 | |
| 13973 chr1 manual_curation CDS 29287969 29288635 . - 2 Parent=GSCOCT00024167001 | |
| 13974 chr1 manual_curation CDS 29288746 29288861 . - 0 Parent=GSCOCT00024167001 | |
| 13975 chr1 manual_curation CDS 29288975 29289784 . - 0 Parent=GSCOCT00024167001 | |
| 13976 chr1 manual_curation gene 29292528 29292698 . - . ID=GSCOCG00024168001;Name=Cc01_g10650 | |
| 13977 chr1 manual_curation mRNA 29292528 29292698 . - . ID=GSCOCT00024168001;Parent=GSCOCG00024168001;Name=Cc01_g10650 | |
| 13978 chr1 manual_curation polypeptide 29292528 29292698 . - . ID=GSCOCP00024168001;Dbxref=TAIR:AT1G08090.1,TAIR:AT5G60770.1,TrEMBL:B9SCG8,TrEMBL:B9SCG9,TrEMBL:C7SFF8;Derives_from=GSCOCT00024168001;Name=Cc01_g10650;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:nitrate transporter 2,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024168001~ nitrate transporter 2:1~ unknown_gene~ fragment;original_location=complement(2261413..2261583);owner=coffea | |
| 13979 chr1 manual_curation exon 29292528 29292698 . - . Parent=GSCOCT00024168001 | |
| 13980 chr1 manual_curation CDS 29292528 29292698 . - 0 Parent=GSCOCT00024168001 | |
| 13981 chr1 manual_curation gene 29295218 29295962 . - . ID=GSCOCG00024169001;Name=Cc01_g10660 | |
| 13982 chr1 manual_curation mRNA 29295218 29295962 . - . ID=GSCOCT00024169001;Parent=GSCOCG00024169001;Name=Cc01_g10660 | |
| 13983 chr1 manual_curation polypeptide 29295540 29295962 . - . ID=GSCOCP00024169001;Dbxref=InterPro:IPR006828,PFAM:PF04739,SwissProt:Q84VQ1,SwissProt:Q9SCY5,SwissProt:Q9ZUU8,TAIR:AT2G28060.1,TAIR:AT4G16360.3,TAIR:AT5G21170.2,TrEMBL:B9HQL8,TrEMBL:B9SCG7,TrEMBL:I1LR63;Derives_from=GSCOCT00024169001;Name=Cc01_g10660;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:SNF1-related protein kinase regulatory subunit beta-3,CC_functional_completeness:complete,CC_gene:KINB3,CC_gene:KINB2,CC_gene:KINB1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024169001~ SNF1-related protein kinase regulatory subunit beta-3~ KINB3~ complete;original_location=complement(join(2264821..2264847%2C2264425..2264748));owner=coffea | |
| 13984 chr1 manual_curation exon 29295218 29295863 . - . Parent=GSCOCT00024169001 | |
| 13985 chr1 manual_curation exon 29295936 29295962 . - . Parent=GSCOCT00024169001 | |
| 13986 chr1 manual_curation CDS 29295540 29295863 . - 0 Parent=GSCOCT00024169001 | |
| 13987 chr1 manual_curation CDS 29295936 29295962 . - 0 Parent=GSCOCT00024169001 | |
| 13988 chr1 manual_curation gene 29327147 29331208 . + . ID=GSCOCG00024172001;Name=Cc01_g10670 | |
| 13989 chr1 manual_curation mRNA 29327147 29331208 . + . ID=GSCOCT00024172001;Parent=GSCOCG00024172001;Name=Cc01_g10670 | |
| 13990 chr1 manual_curation polypeptide 29327147 29328781 . + . ID=GSCOCP00024172001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:O04504,SwissProt:Q8S8P6,SwissProt:Q9ZUU7,TAIR:AT1G09820.1,TAIR:AT2G28050.1,TAIR:AT2G32630.1,TIGRFAMs:TIGR00756,TrEMBL:B9RPS0,TrEMBL:B9T7J0,TrEMBL:D7LIG2;Derives_from=GSCOCT00024172001;Name=Cc01_g10670;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Pentatricopeptide repeat-containing protein At2g28050,CC_functional_completeness:complete,CC_gene:At2g28050,CC_gene:At2g32630,CC_gene:At1g09820;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024172001~ Putative Pentatricopeptide repeat-containing protein At2g28050~ At2g28050~ complete;original_location=2296032..2297666;owner=coffea | |
| 13991 chr1 manual_curation exon 29329085 29329276 . + . Parent=GSCOCT00024172001 | |
| 13992 chr1 manual_curation exon 29330261 29330335 . + . Parent=GSCOCT00024172001 | |
| 13993 chr1 manual_curation exon 29330803 29331208 . + . Parent=GSCOCT00024172001 | |
| 13994 chr1 manual_curation exon 29327147 29328888 . + . Parent=GSCOCT00024172001 | |
| 13995 chr1 manual_curation CDS 29327147 29328781 . + 0 Parent=GSCOCT00024172001 | |
| 13996 chr1 manual_curation gene 29333551 29335267 . + . ID=GSCOCG00024173001;Name=Cc01_g10680 | |
| 13997 chr1 manual_curation mRNA 29333551 29335267 . + . ID=GSCOCT00024173001;Parent=GSCOCG00024173001;Name=Cc01_g10680 | |
| 13998 chr1 manual_curation polypeptide 29333551 29334492 . + . ID=GSCOCP00024173001;Dbxref=TAIR:AT5G62270.2,TrEMBL:A5B3N7,TrEMBL:D7T2A4,TrEMBL:F2CTX7;Derives_from=GSCOCT00024173001;Name=Cc01_g10680;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024173001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(2302436..2302581%2C2302700..2302859%2C2303168..2303377);owner=coffea | |
| 13999 chr1 manual_curation exon 29333551 29333696 . + . Parent=GSCOCT00024173001 | |
| 14000 chr1 manual_curation exon 29333815 29333974 . + . Parent=GSCOCT00024173001 | |
| 14001 chr1 manual_curation exon 29334283 29335267 . + . Parent=GSCOCT00024173001 | |
| 14002 chr1 manual_curation CDS 29333551 29333696 . + 0 Parent=GSCOCT00024173001 | |
| 14003 chr1 manual_curation CDS 29333815 29333974 . + 2 Parent=GSCOCT00024173001 | |
| 14004 chr1 manual_curation CDS 29334283 29334492 . + 0 Parent=GSCOCT00024173001 | |
| 14005 chr1 manual_curation gene 29335336 29337087 . - . ID=GSCOCG00024174001;Name=Cc01_g10690 | |
| 14006 chr1 manual_curation mRNA 29335336 29337087 . - . ID=GSCOCT00024174001;Parent=GSCOCG00024174001;Name=Cc01_g10690 | |
| 14007 chr1 manual_curation polypeptide 29335336 29337087 . - . ID=GSCOCP00024174001;Dbxref=InterPro:IPR009269,PANTHER:PTHR13087,PFAM:PF06047,SwissProt:Q55ED4,SwissProt:Q8N5F7,SwissProt:Q9D0F4,TAIR:AT4G02720.1,TrEMBL:B9GSM4,TrEMBL:B9RUC4,TrEMBL:D7TDY1;Derives_from=GSCOCT00024174001;Name=Cc01_g10690;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of unknown function DUF926,CC_functional_completeness:complete,CC_gene:DDB_G0269284,CC_gene:Nkap,CC_gene:NKAP;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024174001~ Putative Protein of unknown function DUF926~ DDB_G0269284~ complete;original_location=complement(2304221..2305972);owner=coffea | |
| 14008 chr1 manual_curation exon 29335336 29337087 . - . Parent=GSCOCT00024174001 | |
| 14009 chr1 manual_curation CDS 29335336 29337087 . - 0 Parent=GSCOCT00024174001 | |
| 14010 chr1 manual_curation gene 29344023 29349589 . - . ID=GSCOCG00024175001;Name=Cc01_g10700 | |
| 14011 chr1 manual_curation mRNA 29344023 29349589 . - . ID=GSCOCT00024175001;Parent=GSCOCG00024175001;Name=Cc01_g10700 | |
| 14012 chr1 manual_curation polypeptide 29344263 29349059 . - . ID=GSCOCP00024175001;Dbxref=SwissProt:Q8T1P1,SwissProt:Q8TGY9,TAIR:AT3G45090.1,TAIR:AT5G60760.1,TrEMBL:B9HQD6,TrEMBL:I1LL23,TrEMBL:I1LR62;Derives_from=GSCOCT00024175001;Name=Cc01_g10700;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:P-loop containing nucleoside triphosphate hydrolases superfamily protein,CC_functional_completeness:complete,CC_gene:DDB_G0273453,CC_gene:pgk2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024175001~ P-loop containing nucleoside triphosphate hydrolases superfamily protein~ DDB_G0273453~ complete;original_location=complement(join(2317780..2317944%2C2316349..2316677%2C2315873..2315954%2C2314920..2315339%2C2314128..2314838%2C2313796..2313903%2C2313148..2313537));owner=coffea | |
| 14013 chr1 manual_curation exon 29349246 29349589 . - . Parent=GSCOCT00024175001 | |
| 14014 chr1 manual_curation exon 29344023 29344652 . - . Parent=GSCOCT00024175001 | |
| 14015 chr1 manual_curation exon 29344911 29345018 . - . Parent=GSCOCT00024175001 | |
| 14016 chr1 manual_curation exon 29345243 29345953 . - . Parent=GSCOCT00024175001 | |
| 14017 chr1 manual_curation exon 29346035 29346454 . - . Parent=GSCOCT00024175001 | |
| 14018 chr1 manual_curation exon 29346988 29347069 . - . Parent=GSCOCT00024175001 | |
| 14019 chr1 manual_curation exon 29347464 29347792 . - . Parent=GSCOCT00024175001 | |
| 14020 chr1 manual_curation exon 29348895 29349064 . - . Parent=GSCOCT00024175001 | |
| 14021 chr1 manual_curation CDS 29344263 29344652 . - 0 Parent=GSCOCT00024175001 | |
| 14022 chr1 manual_curation CDS 29344911 29345018 . - 0 Parent=GSCOCT00024175001 | |
| 14023 chr1 manual_curation CDS 29345243 29345953 . - 0 Parent=GSCOCT00024175001 | |
| 14024 chr1 manual_curation CDS 29346035 29346454 . - 0 Parent=GSCOCT00024175001 | |
| 14025 chr1 manual_curation CDS 29346988 29347069 . - 2 Parent=GSCOCT00024175001 | |
| 14026 chr1 manual_curation CDS 29347464 29347792 . - 0 Parent=GSCOCT00024175001 | |
| 14027 chr1 manual_curation CDS 29348895 29349059 . - 0 Parent=GSCOCT00024175001 | |
| 14028 chr1 manual_curation gene 29362117 29362761 . + . ID=GSCOCG00024177001;Name=Cc01_g10710 | |
| 14029 chr1 manual_curation mRNA 29362117 29362761 . + . ID=GSCOCT00024177001;Parent=GSCOCG00024177001;Name=Cc01_g10710 | |
| 14030 chr1 manual_curation polypeptide 29362117 29362761 . + . ID=GSCOCP00024177001;Dbxref=InterPro:IPR002539,PFAM:PF01575,SwissProt:O32472,SwissProt:P86397,TAIR:AT5G60335.1,TrEMBL:B9MT64,TrEMBL:B9SK30,TrEMBL:F6GTY3;Derives_from=GSCOCT00024177001;Name=Cc01_g10710;Ontology_term=CC_evidence_code:ISS,GO:0008152,GO:0016491,CC_EC_number:missing_EC_number,PRODUCT:Putative (R)-specific enoyl-CoA hydratase,CC_functional_completeness:complete,CC_gene:phaJ,CC_gene:RPP14;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024177001~ Putative (R)-specific enoyl-CoA hydratase~ phaJ~ complete;original_location=join(2331002..2331274%2C2331357..2331472%2C2331559..2331646);owner=coffea | |
| 14031 chr1 manual_curation exon 29362117 29362389 . + . Parent=GSCOCT00024177001 | |
| 14032 chr1 manual_curation exon 29362472 29362587 . + . Parent=GSCOCT00024177001 | |
| 14033 chr1 manual_curation exon 29362674 29362761 . + . Parent=GSCOCT00024177001 | |
| 14034 chr1 manual_curation CDS 29362117 29362389 . + 0 Parent=GSCOCT00024177001 | |
| 14035 chr1 manual_curation CDS 29362472 29362587 . + 0 Parent=GSCOCT00024177001 | |
| 14036 chr1 manual_curation CDS 29362674 29362761 . + 2 Parent=GSCOCT00024177001 | |
| 14037 chr1 manual_curation gene 29362973 29367625 . - . ID=GSCOCG00024178001;Name=Cc01_g10720 | |
| 14038 chr1 manual_curation mRNA 29362973 29367625 . - . ID=GSCOCT00024178001;Parent=GSCOCG00024178001;Name=Cc01_g10720 | |
| 14039 chr1 manual_curation polypeptide 29363307 29367308 . - . ID=GSCOCP00024178001;Dbxref=HAMAP:MF_00600,InterPro:IPR001844,InterPro:IPR002423,InterPro:IPR018370,PANTHER:PTHR11353,PFAM:PF00118,PRINTS:PR00298,PROSITE:PS00296,SUPERFAMILY:SSF48592,SwissProt:P08926,SwissProt:P21238,SwissProt:P21239,TAIR:AT1G55490.1,TAIR:AT2G28000.1,TAIR:AT5G18820.1,TIGRFAMs:TIGR02348,TrEMBL:B9HQD5,TrEMBL:B9MZ75,TrEMBL:F6GWA8;Derives_from=GSCOCT00024178001;Name=Cc01_g10720;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0005524,GO:0005737,GO:0006457,GO:0042026,GO:0044267,CC_EC_number:missing_EC_number,PRODUCT:RuBisCO large subunit-binding protein subunit alpha%2C chloroplastic,CC_functional_completeness:complete,CC_gene:CPN60A1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024178001~ RuBisCO large subunit-binding protein subunit alpha%2C chloroplastic~ CPN60A1~ complete;original_location=complement(join(2336137..2336193%2C2335845..2336031%2C2334859..2334980%2C2334502..2334709%2C2334249..2334394%2C2333811..2334117%2C2333103..2333554%2C2332192..2332482));owner=coffea | |
| 14040 chr1 manual_curation exon 29362973 29363597 . - . Parent=GSCOCT00024178001 | |
| 14041 chr1 manual_curation exon 29364218 29364669 . - . Parent=GSCOCT00024178001 | |
| 14042 chr1 manual_curation exon 29364926 29365232 . - . Parent=GSCOCT00024178001 | |
| 14043 chr1 manual_curation exon 29365364 29365509 . - . Parent=GSCOCT00024178001 | |
| 14044 chr1 manual_curation exon 29365617 29365824 . - . Parent=GSCOCT00024178001 | |
| 14045 chr1 manual_curation exon 29365974 29366095 . - . Parent=GSCOCT00024178001 | |
| 14046 chr1 manual_curation exon 29366960 29367146 . - . Parent=GSCOCT00024178001 | |
| 14047 chr1 manual_curation exon 29367252 29367625 . - . Parent=GSCOCT00024178001 | |
| 14048 chr1 manual_curation CDS 29363307 29363597 . - 0 Parent=GSCOCT00024178001 | |
| 14049 chr1 manual_curation CDS 29364218 29364669 . - 1 Parent=GSCOCT00024178001 | |
| 14050 chr1 manual_curation CDS 29364926 29365232 . - 0 Parent=GSCOCT00024178001 | |
| 14051 chr1 manual_curation CDS 29365364 29365509 . - 1 Parent=GSCOCT00024178001 | |
| 14052 chr1 manual_curation CDS 29365617 29365824 . - 0 Parent=GSCOCT00024178001 | |
| 14053 chr1 manual_curation CDS 29365974 29366095 . - 1 Parent=GSCOCT00024178001 | |
| 14054 chr1 manual_curation CDS 29366960 29367146 . - 0 Parent=GSCOCT00024178001 | |
| 14055 chr1 manual_curation CDS 29367252 29367308 . - 0 Parent=GSCOCT00024178001 | |
| 14056 chr1 manual_curation gene 29368368 29371565 . + . ID=GSCOCG00024179001;Name=Cc01_g10730 | |
| 14057 chr1 manual_curation mRNA 29368368 29371565 . + . ID=GSCOCT00024179001;Parent=GSCOCG00024179001;Name=Cc01_g10730 | |
| 14058 chr1 manual_curation polypeptide 29368919 29371565 . + . ID=GSCOCP00024179001;Dbxref=InterPro:IPR001296,InterPro:IPR013234,PFAM:PF00534,PFAM:PF08288,SwissProt:P37287,SwissProt:P87172,SwissProt:Q64323,TAIR:AT1G73160.1,TAIR:AT3G45100.1,TrEMBL:D7SK10,TrEMBL:I1NE59;Derives_from=GSCOCT00024179001;Name=Cc01_g10730;Ontology_term=CC_evidence_code:ISS,GO:0006506,GO:0009058,CC_EC_number:missing_EC_number,PRODUCT:Phosphatidylinositol N-acetylglucosaminyltransferase subunit A,CC_functional_completeness:fragment,CC_gene:PIGA,CC_gene:Piga,CC_gene:gpi3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024179001~ Phosphatidylinositol N-acetylglucosaminyltransferase subunit A~ PIGA~ fragment;original_location=join(2337804..2337923%2C2338472..2339044%2C2339678..2339832%2C2340297..2340450);owner=coffea | |
| 14059 chr1 manual_curation exon 29368368 29369038 . + . Parent=GSCOCT00024179001 | |
| 14060 chr1 manual_curation exon 29369587 29370159 . + . Parent=GSCOCT00024179001 | |
| 14061 chr1 manual_curation exon 29370793 29370947 . + . Parent=GSCOCT00024179001 | |
| 14062 chr1 manual_curation exon 29371412 29371565 . + . Parent=GSCOCT00024179001 | |
| 14063 chr1 manual_curation CDS 29368919 29369038 . + 0 Parent=GSCOCT00024179001 | |
| 14064 chr1 manual_curation CDS 29369587 29370159 . + 0 Parent=GSCOCT00024179001 | |
| 14065 chr1 manual_curation CDS 29370793 29370947 . + 0 Parent=GSCOCT00024179001 | |
| 14066 chr1 manual_curation CDS 29371412 29371565 . + 2 Parent=GSCOCT00024179001 | |
| 14067 chr1 manual_curation gene 29371624 29373146 . + . ID=GSCOCG00024180001;Name=Cc01_g10740 | |
| 14068 chr1 manual_curation mRNA 29371624 29373146 . + . ID=GSCOCT00024180001;Parent=GSCOCG00024180001;Name=Cc01_g10740 | |
| 14069 chr1 manual_curation polypeptide 29371624 29372793 . + . ID=GSCOCP00024180001;Dbxref=SwissProt:P37287,SwissProt:P87172,SwissProt:Q64323,TAIR:AT3G45100.1,TrEMBL:B9STX3,TrEMBL:D7SK10,TrEMBL:I1M0D4;Derives_from=GSCOCT00024180001;Name=Cc01_g10740;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Phosphatidylinositol N-acetylglucosaminyltransferase gpi3 subunit,CC_functional_completeness:fragment,CC_gene:gpi3,CC_gene:Piga,CC_gene:PIGA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024180001~ Putative Phosphatidylinositol N-acetylglucosaminyltransferase gpi3 subunit~ gpi3~ fragment;original_location=join(2340509..2340610%2C2340972..2341075%2C2341398..2341488%2C2341589..2341678);owner=coffea | |
| 14070 chr1 manual_curation exon 29371624 29371725 . + . Parent=GSCOCT00024180001 | |
| 14071 chr1 manual_curation exon 29372087 29372190 . + . Parent=GSCOCT00024180001 | |
| 14072 chr1 manual_curation exon 29372513 29372603 . + . Parent=GSCOCT00024180001 | |
| 14073 chr1 manual_curation exon 29372704 29373146 . + . Parent=GSCOCT00024180001 | |
| 14074 chr1 manual_curation CDS 29371624 29371725 . + 0 Parent=GSCOCT00024180001 | |
| 14075 chr1 manual_curation CDS 29372087 29372190 . + 0 Parent=GSCOCT00024180001 | |
| 14076 chr1 manual_curation CDS 29372513 29372603 . + 2 Parent=GSCOCT00024180001 | |
| 14077 chr1 manual_curation CDS 29372704 29372793 . + 0 Parent=GSCOCT00024180001 | |
| 14078 chr1 manual_curation gene 29373434 29374402 . + . ID=GSCOCG00024181001;Name=Cc01_g10750 | |
| 14079 chr1 manual_curation mRNA 29373434 29374402 . + . ID=GSCOCT00024181001;Parent=GSCOCG00024181001;Name=Cc01_g10750 | |
| 14080 chr1 manual_curation polypeptide 29373505 29374104 . + . ID=GSCOCP00024181001;Dbxref=InterPro:IPR005333,InterPro:IPR017887,PFAM:PF03634,PROFILE:PS51369,SwissProt:O23875,SwissProt:O64647,SwissProt:Q93Z00,TAIR:AT1G58100.1,TAIR:AT2G45680.1,TAIR:AT3G47620.1,TrEMBL:B7ZYZ0,TrEMBL:G3BGV9,TrEMBL:I1IW28;Derives_from=GSCOCT00024181001;Name=Cc01_g10750;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Transcription factor%2C TCP,CC_functional_completeness:complete,CC_gene:TCP14,CC_gene:PCF1,CC_gene:TCP9;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024181001~ Putative Transcription factor%2C TCP~ TCP14~ complete;original_location=2342390..2342989;owner=coffea | |
| 14081 chr1 manual_curation exon 29373434 29374402 . + . Parent=GSCOCT00024181001 | |
| 14082 chr1 manual_curation CDS 29373505 29374104 . + 0 Parent=GSCOCT00024181001 | |
| 14083 chr1 manual_curation gene 29375046 29377732 . - . ID=GSCOCG00024182001;Name=Cc01_g10760 | |
| 14084 chr1 manual_curation mRNA 29375046 29377732 . - . ID=GSCOCT00024182001;Parent=GSCOCG00024182001;Name=Cc01_g10760 | |
| 14085 chr1 manual_curation polypeptide 29375276 29376201 . - . ID=GSCOCP00024182001;Dbxref=TAIR:AT2G24960.1,TAIR:AT5G05800.1,TrEMBL:F6H7B9,TrEMBL:G7LA24,TrEMBL:G7LHV4;Derives_from=GSCOCT00024182001;Name=Cc01_g10760;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024182001~ Putative unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).~ unknown_gene~ fragment;original_location=complement(join(2344835..2345086%2C2344161..2344748));owner=coffea | |
| 14086 chr1 manual_curation exon 29377634 29377732 . - . Parent=GSCOCT00024182001 | |
| 14087 chr1 manual_curation exon 29375046 29375863 . - . Parent=GSCOCT00024182001 | |
| 14088 chr1 manual_curation exon 29375950 29376290 . - . Parent=GSCOCT00024182001 | |
| 14089 chr1 manual_curation CDS 29375276 29375863 . - 0 Parent=GSCOCT00024182001 | |
| 14090 chr1 manual_curation CDS 29375950 29376201 . - 0 Parent=GSCOCT00024182001 | |
| 14091 chr1 manual_curation gene 29379092 29384237 . - . ID=GSCOCG00024183001;Name=Cc01_g10770 | |
| 14092 chr1 manual_curation mRNA 29379092 29384237 . - . ID=GSCOCT00024183001;Parent=GSCOCG00024183001;Name=Cc01_g10770 | |
| 14093 chr1 manual_curation polypeptide 29379092 29382912 . - . ID=GSCOCP00024183001;Dbxref=InterPro:IPR003323,PFAM:PF02338,PROFILE:PS50802,SwissProt:Q54P70,TAIR:AT3G02070.1,TAIR:AT5G03330.1,TAIR:AT5G04250.1,TrEMBL:D7SL20,TrEMBL:F6HNE1,TrEMBL:F6HR42;Derives_from=GSCOCT00024183001;Name=Cc01_g10770;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Cysteine proteinases superfamily protein,CC_functional_completeness:complete,CC_gene:DDB_G0284757;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024183001~ Putative Cysteine proteinases superfamily protein~ DDB_G0284757~ complete;original_location=complement(join(2351488..2351797%2C2351228..2351394%2C2350918..2350991%2C2350544..2350598%2C2349872..2349946%2C2349688..2349761%2C2349390..2349438%2C2348858..2348942%2C2348343..2348399%2C2347977..2348062));owner=coffea | |
| 14094 chr1 manual_curation exon 29383108 29383167 . - . Parent=GSCOCT00024183001 | |
| 14095 chr1 manual_curation exon 29384062 29384237 . - . Parent=GSCOCT00024183001 | |
| 14096 chr1 manual_curation exon 29379092 29379177 . - . Parent=GSCOCT00024183001 | |
| 14097 chr1 manual_curation exon 29379458 29379514 . - . Parent=GSCOCT00024183001 | |
| 14098 chr1 manual_curation exon 29379973 29380057 . - . Parent=GSCOCT00024183001 | |
| 14099 chr1 manual_curation exon 29380505 29380553 . - . Parent=GSCOCT00024183001 | |
| 14100 chr1 manual_curation exon 29380803 29380876 . - . Parent=GSCOCT00024183001 | |
| 14101 chr1 manual_curation exon 29380987 29381061 . - . Parent=GSCOCT00024183001 | |
| 14102 chr1 manual_curation exon 29381659 29381713 . - . Parent=GSCOCT00024183001 | |
| 14103 chr1 manual_curation exon 29382033 29382106 . - . Parent=GSCOCT00024183001 | |
| 14104 chr1 manual_curation exon 29382343 29382509 . - . Parent=GSCOCT00024183001 | |
| 14105 chr1 manual_curation exon 29382603 29383029 . - . Parent=GSCOCT00024183001 | |
| 14106 chr1 manual_curation CDS 29379092 29379177 . - 1 Parent=GSCOCT00024183001 | |
| 14107 chr1 manual_curation CDS 29379458 29379514 . - 1 Parent=GSCOCT00024183001 | |
| 14108 chr1 manual_curation CDS 29379973 29380057 . - 0 Parent=GSCOCT00024183001 | |
| 14109 chr1 manual_curation CDS 29380505 29380553 . - 2 Parent=GSCOCT00024183001 | |
| 14110 chr1 manual_curation CDS 29380803 29380876 . - 0 Parent=GSCOCT00024183001 | |
| 14111 chr1 manual_curation CDS 29380987 29381061 . - 0 Parent=GSCOCT00024183001 | |
| 14112 chr1 manual_curation CDS 29381659 29381713 . - 2 Parent=GSCOCT00024183001 | |
| 14113 chr1 manual_curation CDS 29382033 29382106 . - 0 Parent=GSCOCT00024183001 | |
| 14114 chr1 manual_curation CDS 29382343 29382509 . - 1 Parent=GSCOCT00024183001 | |
| 14115 chr1 manual_curation CDS 29382603 29382912 . - 0 Parent=GSCOCT00024183001 | |
| 14116 chr1 manual_curation gene 29398658 29409390 . + . ID=GSCOCG00024185001;Name=Cc01_g10780 | |
| 14117 chr1 manual_curation mRNA 29398658 29409390 . + . ID=GSCOCT00024185001;Parent=GSCOCG00024185001;Name=Cc01_g10780 | |
| 14118 chr1 manual_curation polypeptide 29398658 29409390 . + . ID=GSCOCP00024185001;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR017871,PFAM:PF00005,PROFILE:PS50893,PROSITE:PS00211,SMART:SM00382,SwissProt:Q9FF46,SwissProt:Q9MAG3,SwissProt:Q9SJK6,TAIR:AT1G53390.1,TAIR:AT2G37010.1,TAIR:AT5G60740.1,TrEMBL:B9GZM7,TrEMBL:F6GU29,TrEMBL:F6HR39;Derives_from=GSCOCT00024185001;Name=Cc01_g10780;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0016887,GO:0017111,CC_EC_number:3.6.3.44,CC_EC_number:3.6.3.44,PRODUCT:ABC transporter G family member 28,CC_functional_completeness:complete,CC_gene:ABCG28,CC_gene:WBC30,CC_gene:ABCG24;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024185001~ ABC transporter G family member 28~ ABCG28~ complete;original_location=join(2367543..2367784%2C2368955..2369031%2C2369654..2369947%2C2371294..2371357%2C2371450..2371596%2C2371772..2371806%2C2372490..2372563%2C2373266..2374134%2C2374855..2375151%2C2375449..2375931%2C2376296..2376444%2C2376757..2377046%2C2377147..2377277%2C2378119..2378275);owner=coffea | |
| 14119 chr1 manual_curation exon 29398658 29398899 . + . Parent=GSCOCT00024185001 | |
| 14120 chr1 manual_curation exon 29400070 29400146 . + . Parent=GSCOCT00024185001 | |
| 14121 chr1 manual_curation exon 29400769 29401062 . + . Parent=GSCOCT00024185001 | |
| 14122 chr1 manual_curation exon 29402409 29402472 . + . Parent=GSCOCT00024185001 | |
| 14123 chr1 manual_curation exon 29402565 29402711 . + . Parent=GSCOCT00024185001 | |
| 14124 chr1 manual_curation exon 29402887 29402921 . + . Parent=GSCOCT00024185001 | |
| 14125 chr1 manual_curation exon 29403605 29403678 . + . Parent=GSCOCT00024185001 | |
| 14126 chr1 manual_curation exon 29404381 29405249 . + . Parent=GSCOCT00024185001 | |
| 14127 chr1 manual_curation exon 29405970 29406266 . + . Parent=GSCOCT00024185001 | |
| 14128 chr1 manual_curation exon 29406564 29407046 . + . Parent=GSCOCT00024185001 | |
| 14129 chr1 manual_curation exon 29407411 29407559 . + . Parent=GSCOCT00024185001 | |
| 14130 chr1 manual_curation exon 29407872 29408161 . + . Parent=GSCOCT00024185001 | |
| 14131 chr1 manual_curation exon 29408262 29408392 . + . Parent=GSCOCT00024185001 | |
| 14132 chr1 manual_curation exon 29409234 29409390 . + . Parent=GSCOCT00024185001 | |
| 14133 chr1 manual_curation CDS 29398658 29398899 . + 0 Parent=GSCOCT00024185001 | |
| 14134 chr1 manual_curation CDS 29400070 29400146 . + 2 Parent=GSCOCT00024185001 | |
| 14135 chr1 manual_curation CDS 29400769 29401062 . + 1 Parent=GSCOCT00024185001 | |
| 14136 chr1 manual_curation CDS 29402409 29402472 . + 1 Parent=GSCOCT00024185001 | |
| 14137 chr1 manual_curation CDS 29402565 29402711 . + 2 Parent=GSCOCT00024185001 | |
| 14138 chr1 manual_curation CDS 29402887 29402921 . + 2 Parent=GSCOCT00024185001 | |
| 14139 chr1 manual_curation CDS 29403605 29403678 . + 1 Parent=GSCOCT00024185001 | |
| 14140 chr1 manual_curation CDS 29404381 29405249 . + 0 Parent=GSCOCT00024185001 | |
| 14141 chr1 manual_curation CDS 29405970 29406266 . + 2 Parent=GSCOCT00024185001 | |
| 14142 chr1 manual_curation CDS 29406564 29407046 . + 2 Parent=GSCOCT00024185001 | |
| 14143 chr1 manual_curation CDS 29407411 29407559 . + 2 Parent=GSCOCT00024185001 | |
| 14144 chr1 manual_curation CDS 29407872 29408161 . + 1 Parent=GSCOCT00024185001 | |
| 14145 chr1 manual_curation CDS 29408262 29408392 . + 0 Parent=GSCOCT00024185001 | |
| 14146 chr1 manual_curation CDS 29409234 29409390 . + 2 Parent=GSCOCT00024185001 | |
| 14147 chr1 manual_curation gene 29411341 29413699 . - . ID=GSCOCG00024186001;Name=Cc01_g10790 | |
| 14148 chr1 manual_curation mRNA 29411341 29413699 . - . ID=GSCOCT00024186001;Parent=GSCOCG00024186001;Name=Cc01_g10790 | |
| 14149 chr1 manual_curation polypeptide 29411341 29413553 . - . ID=GSCOCP00024186001;Dbxref=TAIR:AT3G10350.2,TAIR:AT5G60730.1,TrEMBL:G7I505,TrEMBL:I1LCZ2,TrEMBL:I1NHH3;Derives_from=GSCOCT00024186001;Name=Cc01_g10790;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:P-loop containing nucleoside triphosphate hydrolases superfamily protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024186001~ P-loop containing nucleoside triphosphate hydrolases superfamily protein~ unknown_gene~ fragment;original_location=complement(join(2382409..2382438%2C2381997..2382071%2C2381818..2381886%2C2381316..2381450%2C2380226..2380396));owner=coffea | |
| 14150 chr1 manual_curation exon 29413664 29413699 . - . Parent=GSCOCT00024186001 | |
| 14151 chr1 manual_curation exon 29411341 29411511 . - . Parent=GSCOCT00024186001 | |
| 14152 chr1 manual_curation exon 29412431 29412565 . - . Parent=GSCOCT00024186001 | |
| 14153 chr1 manual_curation exon 29412933 29413001 . - . Parent=GSCOCT00024186001 | |
| 14154 chr1 manual_curation exon 29413112 29413186 . - . Parent=GSCOCT00024186001 | |
| 14155 chr1 manual_curation exon 29413524 29413589 . - . Parent=GSCOCT00024186001 | |
| 14156 chr1 manual_curation CDS 29411341 29411511 . - 0 Parent=GSCOCT00024186001 | |
| 14157 chr1 manual_curation CDS 29412431 29412565 . - 0 Parent=GSCOCT00024186001 | |
| 14158 chr1 manual_curation CDS 29412933 29413001 . - 0 Parent=GSCOCT00024186001 | |
| 14159 chr1 manual_curation CDS 29413112 29413186 . - 0 Parent=GSCOCT00024186001 | |
| 14160 chr1 manual_curation CDS 29413524 29413553 . - 0 Parent=GSCOCT00024186001 | |
| 14161 chr1 manual_curation gene 29414887 29420636 . + . ID=GSCOCG00024187001;Name=Cc01_g10800 | |
| 14162 chr1 manual_curation mRNA 29414887 29420636 . + . ID=GSCOCT00024187001;Parent=GSCOCG00024187001;Name=Cc01_g10800 | |
| 14163 chr1 manual_curation polypeptide 29415035 29420076 . + . ID=GSCOCP00024187001;Dbxref=InterPro:IPR006869,PFAM:PF04784,TAIR:AT2G39690.1,TAIR:AT3G12540.1,TAIR:AT5G60720.1,TrEMBL:B9HQD3,TrEMBL:B9STW6,TrEMBL:F6GU27;Derives_from=GSCOCT00024187001;Name=Cc01_g10800;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function%2C DUF547,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024187001~ Protein of unknown function%2C DUF547~ unknown_gene~ complete;original_location=join(2383920..2383961%2C2384128..2384178%2C2384678..2384803%2C2385359..2385814%2C2386590..2387020%2C2387517..2387616%2C2387727..2387792%2C2387878..2387967%2C2388095..2388223%2C2388653..2388961);owner=coffea | |
| 14164 chr1 manual_curation exon 29414887 29415076 . + . Parent=GSCOCT00024187001 | |
| 14165 chr1 manual_curation exon 29415243 29415293 . + . Parent=GSCOCT00024187001 | |
| 14166 chr1 manual_curation exon 29415793 29415918 . + . Parent=GSCOCT00024187001 | |
| 14167 chr1 manual_curation exon 29416474 29416929 . + . Parent=GSCOCT00024187001 | |
| 14168 chr1 manual_curation exon 29417705 29418135 . + . Parent=GSCOCT00024187001 | |
| 14169 chr1 manual_curation exon 29418632 29418731 . + . Parent=GSCOCT00024187001 | |
| 14170 chr1 manual_curation exon 29418842 29418907 . + . Parent=GSCOCT00024187001 | |
| 14171 chr1 manual_curation exon 29418993 29419082 . + . Parent=GSCOCT00024187001 | |
| 14172 chr1 manual_curation exon 29419210 29419338 . + . Parent=GSCOCT00024187001 | |
| 14173 chr1 manual_curation exon 29419768 29420636 . + . Parent=GSCOCT00024187001 | |
| 14174 chr1 manual_curation CDS 29415035 29415076 . + 0 Parent=GSCOCT00024187001 | |
| 14175 chr1 manual_curation CDS 29415243 29415293 . + 0 Parent=GSCOCT00024187001 | |
| 14176 chr1 manual_curation CDS 29415793 29415918 . + 0 Parent=GSCOCT00024187001 | |
| 14177 chr1 manual_curation CDS 29416474 29416929 . + 0 Parent=GSCOCT00024187001 | |
| 14178 chr1 manual_curation CDS 29417705 29418135 . + 0 Parent=GSCOCT00024187001 | |
| 14179 chr1 manual_curation CDS 29418632 29418731 . + 2 Parent=GSCOCT00024187001 | |
| 14180 chr1 manual_curation CDS 29418842 29418907 . + 0 Parent=GSCOCT00024187001 | |
| 14181 chr1 manual_curation CDS 29418993 29419082 . + 0 Parent=GSCOCT00024187001 | |
| 14182 chr1 manual_curation CDS 29419210 29419338 . + 0 Parent=GSCOCT00024187001 | |
| 14183 chr1 manual_curation CDS 29419768 29420076 . + 0 Parent=GSCOCT00024187001 | |
| 14184 chr1 manual_curation gene 29427419 29429071 . + . ID=GSCOCG00024188001;Name=Cc01_g10810 | |
| 14185 chr1 manual_curation mRNA 29427419 29429071 . + . ID=GSCOCT00024188001;Parent=GSCOCG00024188001;Name=Cc01_g10810 | |
| 14186 chr1 manual_curation polypeptide 29427419 29428762 . + . ID=GSCOCP00024188001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,PFAM:PF00560,SMART:SM00369,SwissProt:O22476,SwissProt:Q8VZG8,SwissProt:Q9C9H7,TAIR:AT2G33060.1,TAIR:AT3G05660.1,TAIR:AT3G28890.1,TrEMBL:B9N959,TrEMBL:D7SWS3,TrEMBL:F6I414;Derives_from=GSCOCT00024188001;Name=Cc01_g10810;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative Receptor-like protein 12,CC_functional_completeness:complete,CC_gene:RLP12,CC_gene:BRI1,CC_gene:At4g08850;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024188001~ Putative Receptor-like protein 12~ RLP12~ complete;original_location=2396304..2397647;owner=coffea | |
| 14187 chr1 manual_curation exon 29427419 29429071 . + . Parent=GSCOCT00024188001 | |
| 14188 chr1 manual_curation CDS 29427419 29428762 . + 0 Parent=GSCOCT00024188001 | |
| 14189 chr1 manual_curation gene 29498115 29499375 . + . ID=GSCOCG00024195001;Name=Cc01_g10820 | |
| 14190 chr1 manual_curation mRNA 29498115 29499375 . + . ID=GSCOCT00024195001;Parent=GSCOCG00024195001;Name=Cc01_g10820 | |
| 14191 chr1 manual_curation polypeptide 29498115 29499375 . + . ID=GSCOCP00024195001;Derives_from=GSCOCT00024195001;Name=Cc01_g10820;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024195001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(2467000..2467323%2C2468192..2468260);owner=coffea | |
| 14192 chr1 manual_curation exon 29498115 29498438 . + . Parent=GSCOCT00024195001 | |
| 14193 chr1 manual_curation exon 29499307 29499375 . + . Parent=GSCOCT00024195001 | |
| 14194 chr1 manual_curation CDS 29498115 29498438 . + 0 Parent=GSCOCT00024195001 | |
| 14195 chr1 manual_curation CDS 29499307 29499375 . + 0 Parent=GSCOCT00024195001 | |
| 14196 chr1 manual_curation gene 29499649 29504651 . + . ID=GSCOCG00024196001;Name=Cc01_g10830 | |
| 14197 chr1 manual_curation mRNA 29499649 29504651 . + . ID=GSCOCT00024196001;Parent=GSCOCG00024196001;Name=Cc01_g10830 | |
| 14198 chr1 manual_curation polypeptide 29499649 29504238 . + . ID=GSCOCP00024196001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001356,InterPro:IPR006563,InterPro:IPR009057,InterPro:IPR012287,PFAM:PF00046,PFAM:PF07526,PROFILE:PS50071,SMART:SM00389,SMART:SM00574,SUPERFAMILY:SSF46689,SwissProt:O65685,SwissProt:Q9SJJ3,SwissProt:Q9SW80,TAIR:AT2G27990.1,TAIR:AT4G34610.1,TAIR:AT4G36870.1,TrEMBL:A5AWN3,TrEMBL:B9STV7,TrEMBL:F6GU21;Derives_from=GSCOCT00024196001;Name=Cc01_g10830;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,GO:0043565,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:BLH8,CC_gene:BLH6,CC_gene:BLH2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024196001~ Putative uncharacterized protein~ BLH8~ complete;original_location=join(2468534..2470129%2C2471295..2471701%2C2471785..2471845%2C2472617..2473123);owner=coffea | |
| 14199 chr1 manual_curation exon 29499649 29501244 . + . Parent=GSCOCT00024196001 | |
| 14200 chr1 manual_curation exon 29502410 29502816 . + . Parent=GSCOCT00024196001 | |
| 14201 chr1 manual_curation exon 29502900 29502960 . + . Parent=GSCOCT00024196001 | |
| 14202 chr1 manual_curation exon 29503732 29504651 . + . Parent=GSCOCT00024196001 | |
| 14203 chr1 manual_curation CDS 29499649 29501244 . + 0 Parent=GSCOCT00024196001 | |
| 14204 chr1 manual_curation CDS 29502410 29502816 . + 0 Parent=GSCOCT00024196001 | |
| 14205 chr1 manual_curation CDS 29502900 29502960 . + 2 Parent=GSCOCT00024196001 | |
| 14206 chr1 manual_curation CDS 29503732 29504238 . + 0 Parent=GSCOCT00024196001 | |
| 14207 chr1 manual_curation gene 29507509 29508257 . - . ID=GSCOCG00024197001;Name=Cc01_g10840 | |
| 14208 chr1 manual_curation mRNA 29507509 29508257 . - . ID=GSCOCT00024197001;Parent=GSCOCG00024197001;Name=Cc01_g10840 | |
| 14209 chr1 manual_curation polypeptide 29507744 29507992 . - . ID=GSCOCP00024197001;Derives_from=GSCOCT00024197001;Name=Cc01_g10840;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024197001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(2476629..2476877);owner=coffea | |
| 14210 chr1 manual_curation exon 29508189 29508257 . - . Parent=GSCOCT00024197001 | |
| 14211 chr1 manual_curation exon 29507509 29508009 . - . Parent=GSCOCT00024197001 | |
| 14212 chr1 manual_curation CDS 29507744 29507992 . - 0 Parent=GSCOCT00024197001 | |
| 14213 chr1 manual_curation gene 29511937 29513396 . - . ID=GSCOCG00024199001;Name=Cc01_g10850 | |
| 14214 chr1 manual_curation mRNA 29511937 29513396 . - . ID=GSCOCT00024199001;Parent=GSCOCG00024199001;Name=Cc01_g10850 | |
| 14215 chr1 manual_curation polypeptide 29512094 29513396 . - . ID=GSCOCP00024199001;Derives_from=GSCOCT00024199001;Name=Cc01_g10850;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024199001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(2482259..2482281%2C2481969..2482094%2C2480979..2481030));owner=coffea | |
| 14216 chr1 manual_curation exon 29511937 29512145 . - . Parent=GSCOCT00024199001 | |
| 14217 chr1 manual_curation exon 29513084 29513209 . - . Parent=GSCOCT00024199001 | |
| 14218 chr1 manual_curation exon 29513374 29513396 . - . Parent=GSCOCT00024199001 | |
| 14219 chr1 manual_curation CDS 29512094 29512145 . - 2 Parent=GSCOCT00024199001 | |
| 14220 chr1 manual_curation CDS 29513084 29513209 . - 2 Parent=GSCOCT00024199001 | |
| 14221 chr1 manual_curation CDS 29513374 29513396 . - 0 Parent=GSCOCT00024199001 | |
| 14222 chr1 manual_curation gene 29514247 29517167 . + . ID=GSCOCG00024200001;Name=Cc01_g10860 | |
| 14223 chr1 manual_curation mRNA 29514247 29517167 . + . ID=GSCOCT00024200001;Parent=GSCOCG00024200001;Name=Cc01_g10860 | |
| 14224 chr1 manual_curation polypeptide 29514286 29516963 . + . ID=GSCOCP00024200001;Dbxref=GENE3D:G3DSA:3.10.200.10,InterPro:IPR001148,InterPro:IPR018338,InterPro:IPR018340,PANTHER:PTHR18952,PANTHER:PTHR18952:SF2,PFAM:PF00194,PROFILE:PS51144,PROSITE:PS00162,SUPERFAMILY:SSF51069,SwissProt:O52538,SwissProt:Q50940,SwissProt:Q84UV8,TAIR:AT1G08065.1,TAIR:AT1G08080.1,TAIR:AT2G28210.1,TrEMBL:B9MZ70,TrEMBL:D7SL11,TrEMBL:I1M4I7;Derives_from=GSCOCT00024200001;Name=Cc01_g10860;Ontology_term=CC_evidence_code:ISS,GO:0004089,GO:0006730,GO:0008270,CC_EC_number:4.2.1.1,PRODUCT:Bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3,CC_functional_completeness:complete,CC_gene:NEC3,CC_gene:cah;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024200001~ Bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3~ NEC3~ complete;original_location=join(2483171..2483258%2C2483434..2483651%2C2484233..2484339%2C2484456..2484558%2C2485182..2485349%2C2485542..2485595%2C2485759..2485848);owner=coffea | |
| 14225 chr1 manual_curation exon 29514247 29514373 . + . Parent=GSCOCT00024200001 | |
| 14226 chr1 manual_curation exon 29514549 29514766 . + . Parent=GSCOCT00024200001 | |
| 14227 chr1 manual_curation exon 29515348 29515454 . + . Parent=GSCOCT00024200001 | |
| 14228 chr1 manual_curation exon 29515571 29515673 . + . Parent=GSCOCT00024200001 | |
| 14229 chr1 manual_curation exon 29516297 29516464 . + . Parent=GSCOCT00024200001 | |
| 14230 chr1 manual_curation exon 29516657 29516710 . + . Parent=GSCOCT00024200001 | |
| 14231 chr1 manual_curation exon 29516874 29517167 . + . Parent=GSCOCT00024200001 | |
| 14232 chr1 manual_curation CDS 29514286 29514373 . + 0 Parent=GSCOCT00024200001 | |
| 14233 chr1 manual_curation CDS 29514549 29514766 . + 1 Parent=GSCOCT00024200001 | |
| 14234 chr1 manual_curation CDS 29515348 29515454 . + 0 Parent=GSCOCT00024200001 | |
| 14235 chr1 manual_curation CDS 29515571 29515673 . + 2 Parent=GSCOCT00024200001 | |
| 14236 chr1 manual_curation CDS 29516297 29516464 . + 0 Parent=GSCOCT00024200001 | |
| 14237 chr1 manual_curation CDS 29516657 29516710 . + 0 Parent=GSCOCT00024200001 | |
| 14238 chr1 manual_curation CDS 29516874 29516963 . + 0 Parent=GSCOCT00024200001 | |
| 14239 chr1 manual_curation gene 29533748 29559541 . + . ID=GSCOCG00024201001;Name=Cc01_g10870 | |
| 14240 chr1 manual_curation mRNA 29533748 29559541 . + . ID=GSCOCT00024201001;Parent=GSCOCG00024201001;Name=Cc01_g10870 | |
| 14241 chr1 manual_curation polypeptide 29533748 29559120 . + . ID=GSCOCP00024201001;Dbxref=InterPro:IPR000330,InterPro:IPR000953,InterPro:IPR001650,InterPro:IPR001965,InterPro:IPR011011,InterPro:IPR014021,InterPro:IPR016197,InterPro:IPR019786,InterPro:IPR019787,PFAM:PF00176,PFAM:PF00385,PROFILE:PS50013,PROFILE:PS50016,PROFILE:PS51192,PROFILE:PS51194,PROSITE:PS01359,SMART:SM00249,SMART:SM00298,SUPERFAMILY:SSF54160,SUPERFAMILY:SSF57903,SwissProt:O14647,SwissProt:Q12873,SwissProt:Q9M658,TAIR:AT1G08060.1,TAIR:AT2G25170.1,TAIR:AT5G44800.1,TrEMBL:B9I6P2,TrEMBL:F6GU20,TrEMBL:I1JPN1;Derives_from=GSCOCT00024201001;Name=Cc01_g10870;Ontology_term=CC_evidence_code:ISS,GO:0000785,GO:0003676,GO:0003677,GO:0003682,GO:0004386,GO:0005515,GO:0005524,GO:0005634,GO:0006333,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative Chromatin remodeling complex subunit,CC_functional_completeness:modules,CC_gene:MOM1,CC_gene:CHD3,CC_gene:CHD2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024201001~ Putative Chromatin remodeling complex subunit~ MOM1~ modules;original_location=join(2502633..2502682%2C2502783..2502844%2C2503419..2503970%2C2504366..2504852%2C2507567..2507651%2C2508504..2508649%2C2508960..2509153%2C2509296..2509426%2C2509528..2509800%2C2510927..2511067%2C2513240..2513491%2C2513790..2513930%2C2514037..2514330%2C2514584..2514757%2C2516792..2517695%2C2517837..2518042%2C2519200..2519304%2C2522030..2523631%2C2524559..2526226%2C2526309..2526534%2C2527248..2528005);owner=coffea | |
| 14242 chr1 manual_curation exon 29533748 29533797 . + . Parent=GSCOCT00024201001 | |
| 14243 chr1 manual_curation exon 29533898 29533959 . + . Parent=GSCOCT00024201001 | |
| 14244 chr1 manual_curation exon 29534534 29535085 . + . Parent=GSCOCT00024201001 | |
| 14245 chr1 manual_curation exon 29535481 29535967 . + . Parent=GSCOCT00024201001 | |
| 14246 chr1 manual_curation exon 29538682 29538766 . + . Parent=GSCOCT00024201001 | |
| 14247 chr1 manual_curation exon 29539619 29539764 . + . Parent=GSCOCT00024201001 | |
| 14248 chr1 manual_curation exon 29540075 29540268 . + . Parent=GSCOCT00024201001 | |
| 14249 chr1 manual_curation exon 29540411 29540541 . + . Parent=GSCOCT00024201001 | |
| 14250 chr1 manual_curation exon 29540643 29540915 . + . Parent=GSCOCT00024201001 | |
| 14251 chr1 manual_curation exon 29542042 29542182 . + . Parent=GSCOCT00024201001 | |
| 14252 chr1 manual_curation exon 29544355 29544606 . + . Parent=GSCOCT00024201001 | |
| 14253 chr1 manual_curation exon 29544905 29545045 . + . Parent=GSCOCT00024201001 | |
| 14254 chr1 manual_curation exon 29545152 29545445 . + . Parent=GSCOCT00024201001 | |
| 14255 chr1 manual_curation exon 29545699 29545872 . + . Parent=GSCOCT00024201001 | |
| 14256 chr1 manual_curation exon 29547907 29548810 . + . Parent=GSCOCT00024201001 | |
| 14257 chr1 manual_curation exon 29548952 29549157 . + . Parent=GSCOCT00024201001 | |
| 14258 chr1 manual_curation exon 29550315 29550419 . + . Parent=GSCOCT00024201001 | |
| 14259 chr1 manual_curation exon 29553145 29554746 . + . Parent=GSCOCT00024201001 | |
| 14260 chr1 manual_curation exon 29555674 29557341 . + . Parent=GSCOCT00024201001 | |
| 14261 chr1 manual_curation exon 29557424 29557649 . + . Parent=GSCOCT00024201001 | |
| 14262 chr1 manual_curation exon 29558363 29559541 . + . Parent=GSCOCT00024201001 | |
| 14263 chr1 manual_curation CDS 29533748 29533797 . + 0 Parent=GSCOCT00024201001 | |
| 14264 chr1 manual_curation CDS 29533898 29533959 . + 2 Parent=GSCOCT00024201001 | |
| 14265 chr1 manual_curation CDS 29534534 29535085 . + 1 Parent=GSCOCT00024201001 | |
| 14266 chr1 manual_curation CDS 29535481 29535967 . + 1 Parent=GSCOCT00024201001 | |
| 14267 chr1 manual_curation CDS 29538682 29538766 . + 2 Parent=GSCOCT00024201001 | |
| 14268 chr1 manual_curation CDS 29539619 29539764 . + 0 Parent=GSCOCT00024201001 | |
| 14269 chr1 manual_curation CDS 29540075 29540268 . + 2 Parent=GSCOCT00024201001 | |
| 14270 chr1 manual_curation CDS 29540411 29540541 . + 1 Parent=GSCOCT00024201001 | |
| 14271 chr1 manual_curation CDS 29540643 29540915 . + 0 Parent=GSCOCT00024201001 | |
| 14272 chr1 manual_curation CDS 29542042 29542182 . + 0 Parent=GSCOCT00024201001 | |
| 14273 chr1 manual_curation CDS 29544355 29544606 . + 0 Parent=GSCOCT00024201001 | |
| 14274 chr1 manual_curation CDS 29544905 29545045 . + 0 Parent=GSCOCT00024201001 | |
| 14275 chr1 manual_curation CDS 29545152 29545445 . + 0 Parent=GSCOCT00024201001 | |
| 14276 chr1 manual_curation CDS 29545699 29545872 . + 0 Parent=GSCOCT00024201001 | |
| 14277 chr1 manual_curation CDS 29547907 29548810 . + 0 Parent=GSCOCT00024201001 | |
| 14278 chr1 manual_curation CDS 29548952 29549157 . + 1 Parent=GSCOCT00024201001 | |
| 14279 chr1 manual_curation CDS 29550315 29550419 . + 0 Parent=GSCOCT00024201001 | |
| 14280 chr1 manual_curation CDS 29553145 29554746 . + 0 Parent=GSCOCT00024201001 | |
| 14281 chr1 manual_curation CDS 29555674 29557341 . + 0 Parent=GSCOCT00024201001 | |
| 14282 chr1 manual_curation CDS 29557424 29557649 . + 0 Parent=GSCOCT00024201001 | |
| 14283 chr1 manual_curation CDS 29558363 29559120 . + 1 Parent=GSCOCT00024201001 | |
| 14284 chr1 manual_curation gene 29560756 29565127 . - . ID=GSCOCG00024202001;Name=Cc01_g10880 | |
| 14285 chr1 manual_curation mRNA 29560756 29565127 . - . ID=GSCOCT00024202001;Parent=GSCOCG00024202001;Name=Cc01_g10880 | |
| 14286 chr1 manual_curation polypeptide 29560890 29564593 . - . ID=GSCOCP00024202001;Dbxref=InterPro:IPR001106,InterPro:IPR005922,InterPro:IPR008948,InterPro:IPR022313,PFAM:PF00221,PROSITE:PS00488,SUPERFAMILY:SSF48557,SwissProt:P27991,SwissProt:P45726,SwissProt:Q9SMK9,TAIR:AT2G37040.1,TAIR:AT3G10340.1,TAIR:AT3G53260.1,TIGRFAMs:TIGR01226,TrEMBL:B9T0A8,TrEMBL:F1C7V6,TrEMBL:G3GAT4;Derives_from=GSCOCT00024202001;Name=Cc01_g10880;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005737,GO:0006559,GO:0009058,GO:0016841,CC_EC_number:4.3.1.5,PRODUCT:Phenylalanine ammonia-lyase,CC_functional_completeness:complete,CC_gene:PAL,CC_gene:PAL1,CC_gene:PAL2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024202001~ Phenylalanine ammonia-lyase~ PAL~ complete;original_location=complement(join(2533378..2533478%2C2531071..2531521%2C2530132..2530887%2C2529775..2530050));owner=coffea | |
| 14287 chr1 manual_curation exon 29560756 29561165 . - . Parent=GSCOCT00024202001 | |
| 14288 chr1 manual_curation exon 29561247 29562002 . - . Parent=GSCOCT00024202001 | |
| 14289 chr1 manual_curation exon 29562186 29562636 . - . Parent=GSCOCT00024202001 | |
| 14290 chr1 manual_curation exon 29564493 29565127 . - . Parent=GSCOCT00024202001 | |
| 14291 chr1 manual_curation CDS 29560890 29561165 . - 0 Parent=GSCOCT00024202001 | |
| 14292 chr1 manual_curation CDS 29561247 29562002 . - 0 Parent=GSCOCT00024202001 | |
| 14293 chr1 manual_curation CDS 29562186 29562636 . - 2 Parent=GSCOCT00024202001 | |
| 14294 chr1 manual_curation CDS 29564493 29564593 . - 0 Parent=GSCOCT00024202001 | |
| 14295 chr1 manual_curation gene 29589996 29590667 . + . ID=GSCOCG00024205001;Name=Cc01_g10890 | |
| 14296 chr1 manual_curation mRNA 29589996 29590667 . + . ID=GSCOCT00024205001;Parent=GSCOCG00024205001;Name=Cc01_g10890 | |
| 14297 chr1 manual_curation polypeptide 29589996 29590196 . + . ID=GSCOCP00024205001;Derives_from=GSCOCT00024205001;Name=Cc01_g10890;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024205001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=2558881..2559081;owner=coffea | |
| 14298 chr1 manual_curation exon 29589996 29590667 . + . Parent=GSCOCT00024205001 | |
| 14299 chr1 manual_curation CDS 29589996 29590196 . + 0 Parent=GSCOCT00024205001 | |
| 14300 chr1 manual_curation gene 29593033 29598320 . + . ID=GSCOCG00024206001;Name=Cc01_g10900 | |
| 14301 chr1 manual_curation mRNA 29593033 29598320 . + . ID=GSCOCT00024206001;Parent=GSCOCG00024206001;Name=Cc01_g10900 | |
| 14302 chr1 manual_curation polypeptide 29593296 29597449 . + . ID=GSCOCP00024206001;Dbxref=InterPro:IPR001841,InterPro:IPR002035,InterPro:IPR018957,PFAM:PF00092,PFAM:PF00097,PROFILE:PS50089,PROFILE:PS50234,SMART:SM00184,SMART:SM00327,SwissProt:P97280,SwissProt:Q55874,TAIR:AT2G38970.1,TAIR:AT3G54780.1,TAIR:AT5G60710.1,TrEMBL:A5BI34,TrEMBL:B9SVA9,TrEMBL:F6GU18;Derives_from=GSCOCT00024206001;Name=Cc01_g10900;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Zinc finger (C3HC4-type RING finger) family protein,CC_functional_completeness:complete,CC_gene:sll0103,CC_gene:ITIH3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024206001~ Zinc finger (C3HC4-type RING finger) family protein~ sll0103~ complete;original_location=join(2562181..2562435%2C2564394..2566334);owner=coffea | |
| 14303 chr1 manual_curation exon 29593033 29593550 . + . Parent=GSCOCT00024206001 | |
| 14304 chr1 manual_curation exon 29595509 29598320 . + . Parent=GSCOCT00024206001 | |
| 14305 chr1 manual_curation CDS 29593296 29593550 . + 0 Parent=GSCOCT00024206001 | |
| 14306 chr1 manual_curation CDS 29595509 29597449 . + 0 Parent=GSCOCT00024206001 | |
| 14307 chr1 manual_curation gene 29601423 29609458 . + . ID=GSCOCG00024207001;Name=Cc01_g10910 | |
| 14308 chr1 manual_curation mRNA 29601423 29609458 . + . ID=GSCOCT00024207001;Parent=GSCOCG00024207001;Name=Cc01_g10910 | |
| 14309 chr1 manual_curation polypeptide 29603065 29609078 . + . ID=GSCOCP00024207001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q8VYY5,SwissProt:Q9C660,SwissProt:Q9SX31,TAIR:AT1G26150.1,TAIR:AT1G68690.1,TAIR:AT2G28250.1,TrEMBL:B9SVB0,TrEMBL:C6ZRU5,TrEMBL:D7SL06;Derives_from=GSCOCT00024207001;Name=Cc01_g10910;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Receptor-like serine/threonine-protein kinase NCRK,CC_functional_completeness:complete,CC_gene:NCRK,CC_gene:PERK9,CC_gene:PERK10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024207001~ Receptor-like serine/threonine-protein kinase NCRK~ NCRK~ complete;original_location=join(2571950..2572019%2C2572300..2572425%2C2573042..2573158%2C2574802..2575089%2C2575266..2575507%2C2575643..2575939%2C2576152..2576388%2C2576547..2576774%2C2577652..2577963);owner=coffea | |
| 14310 chr1 manual_curation exon 29601423 29601758 . + . Parent=GSCOCT00024207001 | |
| 14311 chr1 manual_curation exon 29602705 29602778 . + . Parent=GSCOCT00024207001 | |
| 14312 chr1 manual_curation exon 29603035 29603134 . + . Parent=GSCOCT00024207001 | |
| 14313 chr1 manual_curation exon 29603415 29603540 . + . Parent=GSCOCT00024207001 | |
| 14314 chr1 manual_curation exon 29604157 29604273 . + . Parent=GSCOCT00024207001 | |
| 14315 chr1 manual_curation exon 29605917 29606204 . + . Parent=GSCOCT00024207001 | |
| 14316 chr1 manual_curation exon 29606381 29606622 . + . Parent=GSCOCT00024207001 | |
| 14317 chr1 manual_curation exon 29606758 29607054 . + . Parent=GSCOCT00024207001 | |
| 14318 chr1 manual_curation exon 29607267 29607503 . + . Parent=GSCOCT00024207001 | |
| 14319 chr1 manual_curation exon 29607662 29607889 . + . Parent=GSCOCT00024207001 | |
| 14320 chr1 manual_curation exon 29608767 29609458 . + . Parent=GSCOCT00024207001 | |
| 14321 chr1 manual_curation CDS 29603065 29603134 . + 0 Parent=GSCOCT00024207001 | |
| 14322 chr1 manual_curation CDS 29603415 29603540 . + 1 Parent=GSCOCT00024207001 | |
| 14323 chr1 manual_curation CDS 29604157 29604273 . + 1 Parent=GSCOCT00024207001 | |
| 14324 chr1 manual_curation CDS 29605917 29606204 . + 1 Parent=GSCOCT00024207001 | |
| 14325 chr1 manual_curation CDS 29606381 29606622 . + 1 Parent=GSCOCT00024207001 | |
| 14326 chr1 manual_curation CDS 29606758 29607054 . + 0 Parent=GSCOCT00024207001 | |
| 14327 chr1 manual_curation CDS 29607267 29607503 . + 0 Parent=GSCOCT00024207001 | |
| 14328 chr1 manual_curation CDS 29607662 29607889 . + 0 Parent=GSCOCT00024207001 | |
| 14329 chr1 manual_curation CDS 29608767 29609078 . + 0 Parent=GSCOCT00024207001 | |
| 14330 chr1 manual_curation gene 29612586 29613113 . + . ID=GSCOCG00024208001;Name=Cc01_g10920 | |
| 14331 chr1 manual_curation mRNA 29612586 29613113 . + . ID=GSCOCT00024208001;Parent=GSCOCG00024208001;Name=Cc01_g10920 | |
| 14332 chr1 manual_curation polypeptide 29612627 29612890 . + . ID=GSCOCP00024208001;Derives_from=GSCOCT00024208001;Name=Cc01_g10920;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024208001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(2581512..2581600%2C2581697..2581775);owner=coffea | |
| 14333 chr1 manual_curation exon 29612586 29612715 . + . Parent=GSCOCT00024208001 | |
| 14334 chr1 manual_curation exon 29612812 29613113 . + . Parent=GSCOCT00024208001 | |
| 14335 chr1 manual_curation CDS 29612627 29612715 . + 0 Parent=GSCOCT00024208001 | |
| 14336 chr1 manual_curation CDS 29612812 29612890 . + 2 Parent=GSCOCT00024208001 | |
| 14337 chr1 manual_curation gene 29614864 29619960 . + . ID=GSCOCG00024209001;Name=Cc01_g10930 | |
| 14338 chr1 manual_curation mRNA 29614864 29619960 . + . ID=GSCOCT00024209001;Parent=GSCOCG00024209001;Name=Cc01_g10930 | |
| 14339 chr1 manual_curation polypeptide 29615146 29619580 . + . ID=GSCOCP00024209001;Dbxref=InterPro:IPR001247,InterPro:IPR015847,InterPro:IPR020568,PFAM:PF01138,PFAM:PF03725,SUPERFAMILY:SSF54211,SUPERFAMILY:SSF55666,SwissProt:O26779,SwissProt:Q6P0I8,SwissProt:Q8U0L9,TAIR:AT3G46210.1,TAIR:AT3G61620.1,TAIR:AT4G27490.1,TrEMBL:G7JND2,TrEMBL:I1LL42,TrEMBL:I1LR48;Derives_from=GSCOCT00024209001;Name=Cc01_g10930;Ontology_term=CC_evidence_code:ISS,GO:0000175,GO:0003723,GO:0006396,CC_EC_number:missing_EC_number,PRODUCT:Putative Exosome complex component MTR3,CC_functional_completeness:complete,CC_gene:exosc6,CC_gene:PF1568,CC_gene:MTH_683;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024209001~ Putative Exosome complex component MTR3~ exosc6~ complete;original_location=join(2584031..2584175%2C2586105..2586183%2C2586626..2586728%2C2586841..2586961%2C2587041..2587129%2C2588074..2588223%2C2588376..2588465);owner=coffea | |
| 14340 chr1 manual_curation exon 29614864 29615290 . + . Parent=GSCOCT00024209001 | |
| 14341 chr1 manual_curation exon 29617220 29617298 . + . Parent=GSCOCT00024209001 | |
| 14342 chr1 manual_curation exon 29617741 29617843 . + . Parent=GSCOCT00024209001 | |
| 14343 chr1 manual_curation exon 29617956 29618076 . + . Parent=GSCOCT00024209001 | |
| 14344 chr1 manual_curation exon 29618156 29618244 . + . Parent=GSCOCT00024209001 | |
| 14345 chr1 manual_curation exon 29619189 29619338 . + . Parent=GSCOCT00024209001 | |
| 14346 chr1 manual_curation exon 29619491 29619960 . + . Parent=GSCOCT00024209001 | |
| 14347 chr1 manual_curation CDS 29615146 29615290 . + 0 Parent=GSCOCT00024209001 | |
| 14348 chr1 manual_curation CDS 29617220 29617298 . + 1 Parent=GSCOCT00024209001 | |
| 14349 chr1 manual_curation CDS 29617741 29617843 . + 2 Parent=GSCOCT00024209001 | |
| 14350 chr1 manual_curation CDS 29617956 29618076 . + 0 Parent=GSCOCT00024209001 | |
| 14351 chr1 manual_curation CDS 29618156 29618244 . + 1 Parent=GSCOCT00024209001 | |
| 14352 chr1 manual_curation CDS 29619189 29619338 . + 0 Parent=GSCOCT00024209001 | |
| 14353 chr1 manual_curation CDS 29619491 29619580 . + 0 Parent=GSCOCT00024209001 | |
| 14354 chr1 manual_curation gene 29623912 29628639 . + . ID=GSCOCG00024210001;Name=Cc01_g10940 | |
| 14355 chr1 manual_curation mRNA 29623912 29628639 . + . ID=GSCOCT00024210001;Parent=GSCOCG00024210001;Name=Cc01_g10940 | |
| 14356 chr1 manual_curation polypeptide 29624865 29628370 . + . ID=GSCOCP00024210001;Dbxref=GENE3D:G3DSA:2.60.120.10,InterPro:IPR000048,InterPro:IPR000595,InterPro:IPR003938,InterPro:IPR005821,InterPro:IPR014710,InterPro:IPR018490,PFAM:PF00027,PFAM:PF00520,PRINTS:PR01463,PROFILE:PS50042,PROFILE:PS50096,SMART:SM00100,SUPERFAMILY:SSF51206,SwissProt:Q8L7Z0,SwissProt:Q9SJA4,SwissProt:Q9SL29,TAIR:AT2G24610.1,TAIR:AT2G28260.1,TAIR:AT4G30360.1,TrEMBL:D7LID3,TrEMBL:F6GU17,TrEMBL:I1LTK6;Derives_from=GSCOCT00024210001;Name=Cc01_g10940;Ontology_term=CC_evidence_code:ISS,GO:0005216,GO:0005249,GO:0006811,GO:0006813,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Putative cyclic nucleotide-gated ion channel 15,CC_functional_completeness:complete,CC_gene:CNGC15,CC_gene:CNGC14,CC_gene:CNGC17;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024210001~ Putative cyclic nucleotide-gated ion channel 15~ CNGC15~ complete;original_location=join(2593750..2593778%2C2593939..2594491%2C2594568..2594780%2C2595138..2595430%2C2595557..2595668%2C2595991..2596227%2C2596557..2597097%2C2597191..2597255);owner=coffea | |
| 14357 chr1 manual_curation exon 29623912 29624043 . + . Parent=GSCOCT00024210001 | |
| 14358 chr1 manual_curation exon 29624817 29624893 . + . Parent=GSCOCT00024210001 | |
| 14359 chr1 manual_curation exon 29625054 29625606 . + . Parent=GSCOCT00024210001 | |
| 14360 chr1 manual_curation exon 29625683 29625895 . + . Parent=GSCOCT00024210001 | |
| 14361 chr1 manual_curation exon 29626253 29626545 . + . Parent=GSCOCT00024210001 | |
| 14362 chr1 manual_curation exon 29626672 29626783 . + . Parent=GSCOCT00024210001 | |
| 14363 chr1 manual_curation exon 29627106 29627342 . + . Parent=GSCOCT00024210001 | |
| 14364 chr1 manual_curation exon 29627672 29628212 . + . Parent=GSCOCT00024210001 | |
| 14365 chr1 manual_curation exon 29628306 29628639 . + . Parent=GSCOCT00024210001 | |
| 14366 chr1 manual_curation CDS 29624865 29624893 . + 0 Parent=GSCOCT00024210001 | |
| 14367 chr1 manual_curation CDS 29625054 29625606 . + 2 Parent=GSCOCT00024210001 | |
| 14368 chr1 manual_curation CDS 29625683 29625895 . + 0 Parent=GSCOCT00024210001 | |
| 14369 chr1 manual_curation CDS 29626253 29626545 . + 0 Parent=GSCOCT00024210001 | |
| 14370 chr1 manual_curation CDS 29626672 29626783 . + 2 Parent=GSCOCT00024210001 | |
| 14371 chr1 manual_curation CDS 29627106 29627342 . + 0 Parent=GSCOCT00024210001 | |
| 14372 chr1 manual_curation CDS 29627672 29628212 . + 0 Parent=GSCOCT00024210001 | |
| 14373 chr1 manual_curation CDS 29628306 29628370 . + 1 Parent=GSCOCT00024210001 | |
| 14374 chr1 manual_curation gene 29641301 29649568 . + . ID=GSCOCG00024211001;Name=Cc01_g10950 | |
| 14375 chr1 manual_curation mRNA 29641301 29649568 . + . ID=GSCOCT00024211001;Parent=GSCOCG00024211001;Name=Cc01_g10950 | |
| 14376 chr1 manual_curation polypeptide 29641363 29649244 . + . ID=GSCOCP00024211001;Dbxref=InterPro:IPR005269,PFAM:PF03641,SwissProt:Q8L8B8,SwissProt:Q8RUN2,SwissProt:Q9LFH3,TAIR:AT2G28305.1,TAIR:AT2G37210.2,TAIR:AT3G53450.1,TIGRFAMs:TIGR00730,TrEMBL:B9HQC0,TrEMBL:B9SVB4,TrEMBL:D7SL01;Derives_from=GSCOCT00024211001;Name=Cc01_g10950;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1,CC_functional_completeness:complete,CC_gene:LOG1,CC_gene:LOG4,CC_gene:LOG3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024211001~ Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1~ LOG1~ complete;original_location=join(2610248..2610391%2C2610874..2610975%2C2611210..2611238%2C2611366..2611396%2C2612715..2612814%2C2617067..2617137%2C2617255..2617398%2C2618034..2618129);owner=coffea | |
| 14377 chr1 manual_curation exon 29641301 29641506 . + . Parent=GSCOCT00024211001 | |
| 14378 chr1 manual_curation exon 29641989 29642090 . + . Parent=GSCOCT00024211001 | |
| 14379 chr1 manual_curation exon 29642325 29642353 . + . Parent=GSCOCT00024211001 | |
| 14380 chr1 manual_curation exon 29642481 29642511 . + . Parent=GSCOCT00024211001 | |
| 14381 chr1 manual_curation exon 29643830 29643929 . + . Parent=GSCOCT00024211001 | |
| 14382 chr1 manual_curation exon 29648182 29648252 . + . Parent=GSCOCT00024211001 | |
| 14383 chr1 manual_curation exon 29648370 29648513 . + . Parent=GSCOCT00024211001 | |
| 14384 chr1 manual_curation exon 29649149 29649568 . + . Parent=GSCOCT00024211001 | |
| 14385 chr1 manual_curation CDS 29641363 29641506 . + 0 Parent=GSCOCT00024211001 | |
| 14386 chr1 manual_curation CDS 29641989 29642090 . + 0 Parent=GSCOCT00024211001 | |
| 14387 chr1 manual_curation CDS 29642325 29642353 . + 0 Parent=GSCOCT00024211001 | |
| 14388 chr1 manual_curation CDS 29642481 29642511 . + 2 Parent=GSCOCT00024211001 | |
| 14389 chr1 manual_curation CDS 29643830 29643929 . + 0 Parent=GSCOCT00024211001 | |
| 14390 chr1 manual_curation CDS 29648182 29648252 . + 1 Parent=GSCOCT00024211001 | |
| 14391 chr1 manual_curation CDS 29648370 29648513 . + 0 Parent=GSCOCT00024211001 | |
| 14392 chr1 manual_curation CDS 29649149 29649244 . + 0 Parent=GSCOCT00024211001 | |
| 14393 chr1 manual_curation gene 29654956 29659497 . + . ID=GSCOCG00024212001;Name=Cc01_g10960 | |
| 14394 chr1 manual_curation mRNA 29654956 29659497 . + . ID=GSCOCT00024212001;Parent=GSCOCG00024212001;Name=Cc01_g10960 | |
| 14395 chr1 manual_curation polypeptide 29654956 29659497 . + . ID=GSCOCP00024212001;Dbxref=InterPro:IPR001173,PFAM:PF00535,TAIR:AT5G12260.1,TAIR:AT5G60700.1,TrEMBL:A5B9U1,TrEMBL:F6GU16,TrEMBL:Q9FF50;Derives_from=GSCOCT00024212001;Name=Cc01_g10960;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:glycosyltransferase family protein 2,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024212001~ glycosyltransferase family protein 2~ unknown_gene~ modules;original_location=join(2623841..2624967%2C2626448..2627118%2C2627364..2628382);owner=coffea | |
| 14396 chr1 manual_curation exon 29654956 29656082 . + . Parent=GSCOCT00024212001 | |
| 14397 chr1 manual_curation exon 29657563 29658233 . + . Parent=GSCOCT00024212001 | |
| 14398 chr1 manual_curation exon 29658479 29659497 . + . Parent=GSCOCT00024212001 | |
| 14399 chr1 manual_curation CDS 29654956 29656082 . + 0 Parent=GSCOCT00024212001 | |
| 14400 chr1 manual_curation CDS 29657563 29658233 . + 2 Parent=GSCOCT00024212001 | |
| 14401 chr1 manual_curation CDS 29658479 29659497 . + 1 Parent=GSCOCT00024212001 | |
| 14402 chr1 manual_curation gene 29661818 29668199 . + . ID=GSCOCG00024213001;Name=Cc01_g10970 | |
| 14403 chr1 manual_curation mRNA 29661818 29668199 . + . ID=GSCOCT00024213001;Parent=GSCOCG00024213001;Name=Cc01_g10970 | |
| 14404 chr1 manual_curation polypeptide 29663191 29668005 . + . ID=GSCOCP00024213001;Dbxref=InterPro:IPR007877,PFAM:PF05212,TAIR:AT1G08040.1,TAIR:AT1G67850.1,TAIR:AT2G28310.1,TrEMBL:B9HQB8,TrEMBL:B9SVB6,TrEMBL:D7KHY2;Derives_from=GSCOCT00024213001;Name=Cc01_g10970;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF707),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024213001~ Protein of unknown function (DUF707)~ unknown_gene~ complete;original_location=join(2632076..2632095%2C2632218..2632329%2C2632407..2632508%2C2633303..2633407%2C2634153..2634236%2C2634349..2634464%2C2634593..2634694%2C2634812..2634925%2C2635039..2635095%2C2635570..2635636%2C2635785..2635838%2C2636046..2636120%2C2636439..2636474%2C2636792..2636890);owner=coffea | |
| 14405 chr1 manual_curation exon 29661818 29662034 . + . Parent=GSCOCT00024213001 | |
| 14406 chr1 manual_curation exon 29662440 29662509 . + . Parent=GSCOCT00024213001 | |
| 14407 chr1 manual_curation exon 29663082 29663210 . + . Parent=GSCOCT00024213001 | |
| 14408 chr1 manual_curation exon 29663333 29663444 . + . Parent=GSCOCT00024213001 | |
| 14409 chr1 manual_curation exon 29663522 29663623 . + . Parent=GSCOCT00024213001 | |
| 14410 chr1 manual_curation exon 29664418 29664522 . + . Parent=GSCOCT00024213001 | |
| 14411 chr1 manual_curation exon 29665268 29665351 . + . Parent=GSCOCT00024213001 | |
| 14412 chr1 manual_curation exon 29665464 29665579 . + . Parent=GSCOCT00024213001 | |
| 14413 chr1 manual_curation exon 29665708 29665809 . + . Parent=GSCOCT00024213001 | |
| 14414 chr1 manual_curation exon 29665927 29666040 . + . Parent=GSCOCT00024213001 | |
| 14415 chr1 manual_curation exon 29666154 29666210 . + . Parent=GSCOCT00024213001 | |
| 14416 chr1 manual_curation exon 29666685 29666751 . + . Parent=GSCOCT00024213001 | |
| 14417 chr1 manual_curation exon 29666900 29666953 . + . Parent=GSCOCT00024213001 | |
| 14418 chr1 manual_curation exon 29667161 29667235 . + . Parent=GSCOCT00024213001 | |
| 14419 chr1 manual_curation exon 29667554 29667589 . + . Parent=GSCOCT00024213001 | |
| 14420 chr1 manual_curation exon 29667907 29668199 . + . Parent=GSCOCT00024213001 | |
| 14421 chr1 manual_curation CDS 29663191 29663210 . + 0 Parent=GSCOCT00024213001 | |
| 14422 chr1 manual_curation CDS 29663333 29663444 . + 2 Parent=GSCOCT00024213001 | |
| 14423 chr1 manual_curation CDS 29663522 29663623 . + 0 Parent=GSCOCT00024213001 | |
| 14424 chr1 manual_curation CDS 29664418 29664522 . + 0 Parent=GSCOCT00024213001 | |
| 14425 chr1 manual_curation CDS 29665268 29665351 . + 0 Parent=GSCOCT00024213001 | |
| 14426 chr1 manual_curation CDS 29665464 29665579 . + 0 Parent=GSCOCT00024213001 | |
| 14427 chr1 manual_curation CDS 29665708 29665809 . + 2 Parent=GSCOCT00024213001 | |
| 14428 chr1 manual_curation CDS 29665927 29666040 . + 2 Parent=GSCOCT00024213001 | |
| 14429 chr1 manual_curation CDS 29666154 29666210 . + 2 Parent=GSCOCT00024213001 | |
| 14430 chr1 manual_curation CDS 29666685 29666751 . + 2 Parent=GSCOCT00024213001 | |
| 14431 chr1 manual_curation CDS 29666900 29666953 . + 0 Parent=GSCOCT00024213001 | |
| 14432 chr1 manual_curation CDS 29667161 29667235 . + 0 Parent=GSCOCT00024213001 | |
| 14433 chr1 manual_curation CDS 29667554 29667589 . + 0 Parent=GSCOCT00024213001 | |
| 14434 chr1 manual_curation CDS 29667907 29668005 . + 0 Parent=GSCOCT00024213001 | |
| 14435 chr1 manual_curation gene 29670143 29673245 . + . ID=GSCOCG00024214001;Name=Cc01_g10980 | |
| 14436 chr1 manual_curation mRNA 29670143 29673245 . + . ID=GSCOCT00024214001;Parent=GSCOCG00024214001;Name=Cc01_g10980 | |
| 14437 chr1 manual_curation polypeptide 29670604 29673101 . + . ID=GSCOCP00024214001;Dbxref=InterPro:IPR004853,PFAM:PF03151,SwissProt:Q1JQ66,SwissProt:Q8RXL8,SwissProt:Q9SRE4,TAIR:AT1G06890.1,TAIR:AT2G28315.1,TAIR:AT2G30460.1,TrEMBL:B9SVB8,TrEMBL:I1LTK3,TrEMBL:I1M4J5;Derives_from=GSCOCT00024214001;Name=Cc01_g10980;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterized membrane protein At1g06890,CC_functional_completeness:complete,CC_gene:At1g06890,CC_gene:UDP-GALT2,CC_gene:slc35e3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024214001~ Uncharacterized membrane protein At1g06890~ At1g06890~ complete;original_location=join(2639489..2639609%2C2639953..2640137%2C2640493..2640560%2C2640716..2640848%2C2641273..2641434%2C2641524..2641796%2C2641903..2641986);owner=coffea | |
| 14438 chr1 manual_curation exon 29670143 29670724 . + . Parent=GSCOCT00024214001 | |
| 14439 chr1 manual_curation exon 29671068 29671252 . + . Parent=GSCOCT00024214001 | |
| 14440 chr1 manual_curation exon 29671608 29671675 . + . Parent=GSCOCT00024214001 | |
| 14441 chr1 manual_curation exon 29671831 29671963 . + . Parent=GSCOCT00024214001 | |
| 14442 chr1 manual_curation exon 29672388 29672549 . + . Parent=GSCOCT00024214001 | |
| 14443 chr1 manual_curation exon 29672639 29672911 . + . Parent=GSCOCT00024214001 | |
| 14444 chr1 manual_curation exon 29673018 29673245 . + . Parent=GSCOCT00024214001 | |
| 14445 chr1 manual_curation CDS 29670604 29670724 . + 0 Parent=GSCOCT00024214001 | |
| 14446 chr1 manual_curation CDS 29671068 29671252 . + 1 Parent=GSCOCT00024214001 | |
| 14447 chr1 manual_curation CDS 29671608 29671675 . + 0 Parent=GSCOCT00024214001 | |
| 14448 chr1 manual_curation CDS 29671831 29671963 . + 2 Parent=GSCOCT00024214001 | |
| 14449 chr1 manual_curation CDS 29672388 29672549 . + 0 Parent=GSCOCT00024214001 | |
| 14450 chr1 manual_curation CDS 29672639 29672911 . + 0 Parent=GSCOCT00024214001 | |
| 14451 chr1 manual_curation CDS 29673018 29673101 . + 0 Parent=GSCOCT00024214001 | |
| 14452 chr1 manual_curation gene 29677248 29685070 . + . ID=GSCOCG00024215001;Name=Cc01_g10990 | |
| 14453 chr1 manual_curation mRNA 29677248 29685070 . + . ID=GSCOCT00024215001;Parent=GSCOCG00024215001;Name=Cc01_g10990 | |
| 14454 chr1 manual_curation polypeptide 29677702 29684634 . + . ID=GSCOCP00024215001;Dbxref=GENE3D:G3DSA:2.30.29.30,InterPro:IPR001849,InterPro:IPR002913,InterPro:IPR009769,InterPro:IPR011993,PFAM:PF00169,PFAM:PF01852,PFAM:PF07059,PROFILE:PS50003,PROFILE:PS50848,SMART:SM00233,SMART:SM00234,TAIR:AT2G28320.1,TAIR:AT3G54800.1,TAIR:AT5G45560.1,TrEMBL:B9HQB7,TrEMBL:B9SVB9,TrEMBL:D7SKZ7;Derives_from=GSCOCT00024215001;Name=Cc01_g10990;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pleckstrin homology (PH) and lipid-binding START domains-containing protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024215001~ Pleckstrin homology (PH) and lipid-binding START domains-containing protein~ unknown_gene~ complete;original_location=join(2646587..2646712%2C2648126..2648200%2C2648318..2648371%2C2648447..2648512%2C2648590..2648645%2C2648829..2648959%2C2649033..2649079%2C2649154..2649251%2C2649629..2649724%2C2649810..2649874%2C2649950..2650021%2C2650399..2650545%2C2650731..2651044%2C2651615..2651678%2C2651787..2651962%2C2652115..2652216%2C2652329..2652379%2C2652462..2652605%2C2652811..2652906%2C2653196..2653297%2C2653427..2653519);owner=coffea | |
| 14455 chr1 manual_curation exon 29677248 29677827 . + . Parent=GSCOCT00024215001 | |
| 14456 chr1 manual_curation exon 29679241 29679315 . + . Parent=GSCOCT00024215001 | |
| 14457 chr1 manual_curation exon 29679433 29679486 . + . Parent=GSCOCT00024215001 | |
| 14458 chr1 manual_curation exon 29679562 29679627 . + . Parent=GSCOCT00024215001 | |
| 14459 chr1 manual_curation exon 29679705 29679760 . + . Parent=GSCOCT00024215001 | |
| 14460 chr1 manual_curation exon 29679944 29680074 . + . Parent=GSCOCT00024215001 | |
| 14461 chr1 manual_curation exon 29680148 29680194 . + . Parent=GSCOCT00024215001 | |
| 14462 chr1 manual_curation exon 29680269 29680366 . + . Parent=GSCOCT00024215001 | |
| 14463 chr1 manual_curation exon 29680744 29680839 . + . Parent=GSCOCT00024215001 | |
| 14464 chr1 manual_curation exon 29680925 29680989 . + . Parent=GSCOCT00024215001 | |
| 14465 chr1 manual_curation exon 29681065 29681136 . + . Parent=GSCOCT00024215001 | |
| 14466 chr1 manual_curation exon 29681514 29681660 . + . Parent=GSCOCT00024215001 | |
| 14467 chr1 manual_curation exon 29681846 29682159 . + . Parent=GSCOCT00024215001 | |
| 14468 chr1 manual_curation exon 29682730 29682793 . + . Parent=GSCOCT00024215001 | |
| 14469 chr1 manual_curation exon 29682902 29683077 . + . Parent=GSCOCT00024215001 | |
| 14470 chr1 manual_curation exon 29683230 29683331 . + . Parent=GSCOCT00024215001 | |
| 14471 chr1 manual_curation exon 29683444 29683494 . + . Parent=GSCOCT00024215001 | |
| 14472 chr1 manual_curation exon 29683577 29683720 . + . Parent=GSCOCT00024215001 | |
| 14473 chr1 manual_curation exon 29683926 29684021 . + . Parent=GSCOCT00024215001 | |
| 14474 chr1 manual_curation exon 29684311 29684412 . + . Parent=GSCOCT00024215001 | |
| 14475 chr1 manual_curation exon 29684542 29685070 . + . Parent=GSCOCT00024215001 | |
| 14476 chr1 manual_curation CDS 29677702 29677827 . + 0 Parent=GSCOCT00024215001 | |
| 14477 chr1 manual_curation CDS 29679241 29679315 . + 0 Parent=GSCOCT00024215001 | |
| 14478 chr1 manual_curation CDS 29679433 29679486 . + 0 Parent=GSCOCT00024215001 | |
| 14479 chr1 manual_curation CDS 29679562 29679627 . + 0 Parent=GSCOCT00024215001 | |
| 14480 chr1 manual_curation CDS 29679705 29679760 . + 0 Parent=GSCOCT00024215001 | |
| 14481 chr1 manual_curation CDS 29679944 29680074 . + 2 Parent=GSCOCT00024215001 | |
| 14482 chr1 manual_curation CDS 29680148 29680194 . + 1 Parent=GSCOCT00024215001 | |
| 14483 chr1 manual_curation CDS 29680269 29680366 . + 0 Parent=GSCOCT00024215001 | |
| 14484 chr1 manual_curation CDS 29680744 29680839 . + 2 Parent=GSCOCT00024215001 | |
| 14485 chr1 manual_curation CDS 29680925 29680989 . + 2 Parent=GSCOCT00024215001 | |
| 14486 chr1 manual_curation CDS 29681065 29681136 . + 1 Parent=GSCOCT00024215001 | |
| 14487 chr1 manual_curation CDS 29681514 29681660 . + 1 Parent=GSCOCT00024215001 | |
| 14488 chr1 manual_curation CDS 29681846 29682159 . + 1 Parent=GSCOCT00024215001 | |
| 14489 chr1 manual_curation CDS 29682730 29682793 . + 0 Parent=GSCOCT00024215001 | |
| 14490 chr1 manual_curation CDS 29682902 29683077 . + 1 Parent=GSCOCT00024215001 | |
| 14491 chr1 manual_curation CDS 29683230 29683331 . + 0 Parent=GSCOCT00024215001 | |
| 14492 chr1 manual_curation CDS 29683444 29683494 . + 0 Parent=GSCOCT00024215001 | |
| 14493 chr1 manual_curation CDS 29683577 29683720 . + 0 Parent=GSCOCT00024215001 | |
| 14494 chr1 manual_curation CDS 29683926 29684021 . + 0 Parent=GSCOCT00024215001 | |
| 14495 chr1 manual_curation CDS 29684311 29684412 . + 0 Parent=GSCOCT00024215001 | |
| 14496 chr1 manual_curation CDS 29684542 29684634 . + 0 Parent=GSCOCT00024215001 | |
| 14497 chr1 manual_curation gene 29686145 29694129 . + . ID=GSCOCG00024216001;Name=Cc01_g11000 | |
| 14498 chr1 manual_curation mRNA 29686145 29694129 . + . ID=GSCOCT00024216001;Parent=GSCOCG00024216001;Name=Cc01_g11000 | |
| 14499 chr1 manual_curation polypeptide 29686781 29693143 . + . ID=GSCOCP00024216001;Dbxref=InterPro:IPR000863,PFAM:PF00685,SwissProt:Q3EDG5,TAIR:AT1G08030.1,TrEMBL:B9SVC0,TrEMBL:D7SKZ6,TrEMBL:I1LL46;Derives_from=GSCOCT00024216001;Name=Cc01_g11000;Ontology_term=CC_evidence_code:ISS,GO:0008146,CC_EC_number:missing_EC_number,PRODUCT:Protein-tyrosine sulfotransferase,CC_functional_completeness:complete,CC_gene:TPST;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024216001~ Protein-tyrosine sulfotransferase~ TPST~ complete;original_location=join(2655666..2655723%2C2656292..2656469%2C2656584..2656655%2C2657462..2657753%2C2658284..2658424%2C2659118..2659222%2C2659336..2659483%2C2660259..2660308%2C2660443..2660511%2C2660600..2660719%2C2661455..2661589%2C2661885..2662028);owner=coffea | |
| 14500 chr1 manual_curation exon 29686145 29686416 . + . Parent=GSCOCT00024216001 | |
| 14501 chr1 manual_curation exon 29686757 29686838 . + . Parent=GSCOCT00024216001 | |
| 14502 chr1 manual_curation exon 29687407 29687584 . + . Parent=GSCOCT00024216001 | |
| 14503 chr1 manual_curation exon 29687699 29687770 . + . Parent=GSCOCT00024216001 | |
| 14504 chr1 manual_curation exon 29688577 29688868 . + . Parent=GSCOCT00024216001 | |
| 14505 chr1 manual_curation exon 29689399 29689539 . + . Parent=GSCOCT00024216001 | |
| 14506 chr1 manual_curation exon 29690233 29690337 . + . Parent=GSCOCT00024216001 | |
| 14507 chr1 manual_curation exon 29690451 29690598 . + . Parent=GSCOCT00024216001 | |
| 14508 chr1 manual_curation exon 29691374 29691423 . + . Parent=GSCOCT00024216001 | |
| 14509 chr1 manual_curation exon 29691558 29691626 . + . Parent=GSCOCT00024216001 | |
| 14510 chr1 manual_curation exon 29691715 29691834 . + . Parent=GSCOCT00024216001 | |
| 14511 chr1 manual_curation exon 29692570 29692704 . + . Parent=GSCOCT00024216001 | |
| 14512 chr1 manual_curation exon 29693000 29694129 . + . Parent=GSCOCT00024216001 | |
| 14513 chr1 manual_curation CDS 29686781 29686838 . + 0 Parent=GSCOCT00024216001 | |
| 14514 chr1 manual_curation CDS 29687407 29687584 . + 1 Parent=GSCOCT00024216001 | |
| 14515 chr1 manual_curation CDS 29687699 29687770 . + 2 Parent=GSCOCT00024216001 | |
| 14516 chr1 manual_curation CDS 29688577 29688868 . + 2 Parent=GSCOCT00024216001 | |
| 14517 chr1 manual_curation CDS 29689399 29689539 . + 0 Parent=GSCOCT00024216001 | |
| 14518 chr1 manual_curation CDS 29690233 29690337 . + 0 Parent=GSCOCT00024216001 | |
| 14519 chr1 manual_curation CDS 29690451 29690598 . + 0 Parent=GSCOCT00024216001 | |
| 14520 chr1 manual_curation CDS 29691374 29691423 . + 1 Parent=GSCOCT00024216001 | |
| 14521 chr1 manual_curation CDS 29691558 29691626 . + 0 Parent=GSCOCT00024216001 | |
| 14522 chr1 manual_curation CDS 29691715 29691834 . + 0 Parent=GSCOCT00024216001 | |
| 14523 chr1 manual_curation CDS 29692570 29692704 . + 0 Parent=GSCOCT00024216001 | |
| 14524 chr1 manual_curation CDS 29693000 29693143 . + 0 Parent=GSCOCT00024216001 | |
| 14525 chr1 manual_curation gene 29697336 29703157 . + . ID=GSCOCG00024217001;Name=Cc01_g11010 | |
| 14526 chr1 manual_curation mRNA 29697336 29703157 . + . ID=GSCOCT00024217001;Parent=GSCOCG00024217001;Name=Cc01_g11010 | |
| 14527 chr1 manual_curation polypeptide 29698742 29702704 . + . ID=GSCOCP00024217001;Dbxref=GENE3D:G3DSA:3.30.50.10,InterPro:IPR000679,InterPro:IPR013088,PFAM:PF00320,PROFILE:PS50114,PROSITE:PS00344,SMART:SM00401,SwissProt:Q6DBP8,SwissProt:Q8VZP4,SwissProt:Q9SKN6,TAIR:AT1G08000.1,TAIR:AT1G08010.1,TAIR:AT2G28340.1,TrEMBL:B9MZ58,TrEMBL:I1JD75,TrEMBL:Q9AVU3;Derives_from=GSCOCT00024217001;Name=Cc01_g11010;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0008270,GO:0043565,CC_EC_number:missing_EC_number,PRODUCT:Putative GATA transcription factor 11,CC_functional_completeness:complete,CC_gene:GATA11,CC_gene:GATA10,CC_gene:GATA13;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024217001~ Putative GATA transcription factor 11~ GATA11~ complete;original_location=join(2667627..2667887%2C2670819..2671165%2C2671247..2671589);owner=coffea | |
| 14528 chr1 manual_curation exon 29697336 29697596 . + . Parent=GSCOCT00024217001 | |
| 14529 chr1 manual_curation exon 29698739 29699002 . + . Parent=GSCOCT00024217001 | |
| 14530 chr1 manual_curation exon 29701934 29702280 . + . Parent=GSCOCT00024217001 | |
| 14531 chr1 manual_curation exon 29702362 29703157 . + . Parent=GSCOCT00024217001 | |
| 14532 chr1 manual_curation CDS 29698742 29699002 . + 0 Parent=GSCOCT00024217001 | |
| 14533 chr1 manual_curation CDS 29701934 29702280 . + 0 Parent=GSCOCT00024217001 | |
| 14534 chr1 manual_curation CDS 29702362 29702704 . + 2 Parent=GSCOCT00024217001 | |
| 14535 chr1 manual_curation gene 29719424 29723241 . + . ID=GSCOCG00024219001;Name=Cc01_g11020 | |
| 14536 chr1 manual_curation mRNA 29719424 29723241 . + . ID=GSCOCT00024219001;Parent=GSCOCG00024219001;Name=Cc01_g11020 | |
| 14537 chr1 manual_curation polypeptide 29719424 29722979 . + . ID=GSCOCP00024219001;Dbxref=InterPro:IPR003311,InterPro:IPR003340,InterPro:IPR010525,InterPro:IPR011525,PFAM:PF02309,PFAM:PF02362,PFAM:PF06507,PROFILE:PS50863,PROFILE:PS50962,SwissProt:Q653H7,SwissProt:Q9AV47,SwissProt:Q9SKN5,TAIR:AT1G77850.1,TAIR:AT2G28350.1,TAIR:AT4G30080.1,TrEMBL:E2FHH6,TrEMBL:F6GU14,TrEMBL:H2BPZ3;Derives_from=GSCOCT00024219001;Name=Cc01_g11020;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0005634,GO:0009725,GO:0045449,GO:0046983,CC_EC_number:missing_EC_number,PRODUCT:Auxin response factor 18,CC_functional_completeness:complete,CC_gene:ARF18,CC_gene:ARF22,CC_gene:ARF10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024219001~ Auxin response factor 18~ ARF18~ complete;original_location=join(2688309..2688600%2C2688640..2689415%2C2690489..2691372%2C2691504..2691566%2C2691783..2691864);owner=coffea | |
| 14538 chr1 manual_curation exon 29719424 29719715 . + . Parent=GSCOCT00024219001 | |
| 14539 chr1 manual_curation exon 29719755 29720530 . + . Parent=GSCOCT00024219001 | |
| 14540 chr1 manual_curation exon 29721604 29722487 . + . Parent=GSCOCT00024219001 | |
| 14541 chr1 manual_curation exon 29722619 29722681 . + . Parent=GSCOCT00024219001 | |
| 14542 chr1 manual_curation exon 29722898 29723241 . + . Parent=GSCOCT00024219001 | |
| 14543 chr1 manual_curation CDS 29719424 29719715 . + 0 Parent=GSCOCT00024219001 | |
| 14544 chr1 manual_curation CDS 29719755 29720530 . + 1 Parent=GSCOCT00024219001 | |
| 14545 chr1 manual_curation CDS 29721604 29722487 . + 0 Parent=GSCOCT00024219001 | |
| 14546 chr1 manual_curation CDS 29722619 29722681 . + 2 Parent=GSCOCT00024219001 | |
| 14547 chr1 manual_curation CDS 29722898 29722979 . + 2 Parent=GSCOCT00024219001 | |
| 14548 chr1 manual_curation gene 29729018 29730674 . + . ID=GSCOCG00024220001;Name=Cc01_g11030 | |
| 14549 chr1 manual_curation mRNA 29729018 29730674 . + . ID=GSCOCT00024220001;Parent=GSCOCG00024220001;Name=Cc01_g11030 | |
| 14550 chr1 manual_curation polypeptide 29729491 29730180 . + . ID=GSCOCP00024220001;Dbxref=InterPro:IPR005181,PFAM:PF03629,SwissProt:Q8L9J9,TAIR:AT3G53010.1,TAIR:AT4G34215.1,TrEMBL:B9MVW2,TrEMBL:B9R763,TrEMBL:F6GZY1;Derives_from=GSCOCT00024220001;Name=Cc01_g11030;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Probable carbohydrate esterase At4g34215,CC_functional_completeness:complete,CC_gene:At4g34215;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024220001~ Probable carbohydrate esterase At4g34215~ At4g34215~ complete;original_location=2698376..2699065;owner=coffea | |
| 14551 chr1 manual_curation exon 29729018 29730674 . + . Parent=GSCOCT00024220001 | |
| 14552 chr1 manual_curation CDS 29729491 29730180 . + 0 Parent=GSCOCT00024220001 | |
| 14553 chr1 manual_curation gene 29731240 29732402 . + . ID=GSCOCG00024222001;Name=Cc01_g11040 | |
| 14554 chr1 manual_curation mRNA 29731240 29732402 . + . ID=GSCOCT00024222001;Parent=GSCOCG00024222001;Name=Cc01_g11040 | |
| 14555 chr1 manual_curation polypeptide 29731530 29731865 . + . ID=GSCOCP00024222001;Derives_from=GSCOCT00024222001;Name=Cc01_g11040;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024222001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=2700415..2700750;owner=coffea | |
| 14556 chr1 manual_curation exon 29731240 29732402 . + . Parent=GSCOCT00024222001 | |
| 14557 chr1 manual_curation CDS 29731530 29731865 . + 0 Parent=GSCOCT00024222001 | |
| 14558 chr1 manual_curation gene 29732577 29733016 . - . ID=GSCOCG00024223001;Name=Cc01_g11050 | |
| 14559 chr1 manual_curation mRNA 29732577 29733016 . - . ID=GSCOCT00024223001;Parent=GSCOCG00024223001;Name=Cc01_g11050 | |
| 14560 chr1 manual_curation polypeptide 29732577 29732798 . - . ID=GSCOCP00024223001;Dbxref=InterPro:IPR000626,InterPro:IPR019955,PFAM:PF00240,PROFILE:PS50053,SwissProt:Q791B0,SwissProt:Q9EPV8,SwissProt:Q9FGZ9,TAIR:AT3G45180.1,TAIR:AT5G42300.1,TrEMBL:B9MZ56,TrEMBL:I1IBS6;Derives_from=GSCOCT00024223001;Name=Cc01_g11050;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Ubiquitin-like protein 5,CC_functional_completeness:complete,CC_gene:UBL5,CC_gene:Ubl5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024223001~ Ubiquitin-like protein 5~ UBL5~ complete;original_location=complement(2701462..2701683);owner=coffea | |
| 14561 chr1 manual_curation exon 29732577 29733016 . - . Parent=GSCOCT00024223001 | |
| 14562 chr1 manual_curation CDS 29732577 29732798 . - 0 Parent=GSCOCT00024223001 | |
| 14563 chr1 manual_curation gene 29733700 29743177 . - . ID=GSCOCG00024224001;Name=Cc01_g11060 | |
| 14564 chr1 manual_curation mRNA 29733700 29743177 . - . ID=GSCOCT00024224001;Parent=GSCOCG00024224001;Name=Cc01_g11060 | |
| 14565 chr1 manual_curation polypeptide 29734043 29742919 . - . ID=GSCOCP00024224001;Dbxref=InterPro:IPR007587,PANTHER:PTHR12634,PFAM:PF04499,SwissProt:Q5F471,SwissProt:Q5H9R7,SwissProt:Q922D4,TAIR:AT1G07990.1,TAIR:AT2G28360.1,TAIR:AT3G45190.1,TrEMBL:B9SVC4,TrEMBL:F6GU12,TrEMBL:I1LTJ8;Derives_from=GSCOCT00024224001;Name=Cc01_g11060;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:SIT4 phosphatase-associated family protein,CC_functional_completeness:complete,CC_gene:PPP6R3,CC_gene:Ppp6r3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024224001~ SIT4 phosphatase-associated family protein~ PPP6R3~ complete;original_location=complement(join(2711766..2711804%2C2710635..2710738%2C2710367..2710453%2C2710140..2710215%2C2709986..2710060%2C2709824..2709877%2C2709093..2709152%2C2708862..2708978%2C2708299..2708393%2C2708016..2708221%2C2706950..2707047%2C2706583..2706686%2C2706314..2706479%2C2706028..2706150%2C2705328..2705410%2C2704521..2704662%2C2704360..2704389%2C2704083..2704153%2C2702928..2703747));owner=coffea | |
| 14566 chr1 manual_curation exon 29733700 29734862 . - . Parent=GSCOCT00024224001 | |
| 14567 chr1 manual_curation exon 29735198 29735268 . - . Parent=GSCOCT00024224001 | |
| 14568 chr1 manual_curation exon 29735475 29735504 . - . Parent=GSCOCT00024224001 | |
| 14569 chr1 manual_curation exon 29735636 29735777 . - . Parent=GSCOCT00024224001 | |
| 14570 chr1 manual_curation exon 29736443 29736525 . - . Parent=GSCOCT00024224001 | |
| 14571 chr1 manual_curation exon 29737143 29737265 . - . Parent=GSCOCT00024224001 | |
| 14572 chr1 manual_curation exon 29737429 29737594 . - . Parent=GSCOCT00024224001 | |
| 14573 chr1 manual_curation exon 29737698 29737801 . - . Parent=GSCOCT00024224001 | |
| 14574 chr1 manual_curation exon 29738065 29738162 . - . Parent=GSCOCT00024224001 | |
| 14575 chr1 manual_curation exon 29739131 29739336 . - . Parent=GSCOCT00024224001 | |
| 14576 chr1 manual_curation exon 29739414 29739508 . - . Parent=GSCOCT00024224001 | |
| 14577 chr1 manual_curation exon 29739977 29740093 . - . Parent=GSCOCT00024224001 | |
| 14578 chr1 manual_curation exon 29740208 29740267 . - . Parent=GSCOCT00024224001 | |
| 14579 chr1 manual_curation exon 29740939 29740992 . - . Parent=GSCOCT00024224001 | |
| 14580 chr1 manual_curation exon 29741101 29741175 . - . Parent=GSCOCT00024224001 | |
| 14581 chr1 manual_curation exon 29741255 29741330 . - . Parent=GSCOCT00024224001 | |
| 14582 chr1 manual_curation exon 29741482 29741568 . - . Parent=GSCOCT00024224001 | |
| 14583 chr1 manual_curation exon 29741750 29741853 . - . Parent=GSCOCT00024224001 | |
| 14584 chr1 manual_curation exon 29742881 29743177 . - . Parent=GSCOCT00024224001 | |
| 14585 chr1 manual_curation CDS 29734043 29734862 . - 2 Parent=GSCOCT00024224001 | |
| 14586 chr1 manual_curation CDS 29735198 29735268 . - 0 Parent=GSCOCT00024224001 | |
| 14587 chr1 manual_curation CDS 29735475 29735504 . - 0 Parent=GSCOCT00024224001 | |
| 14588 chr1 manual_curation CDS 29735636 29735777 . - 2 Parent=GSCOCT00024224001 | |
| 14589 chr1 manual_curation CDS 29736443 29736525 . - 0 Parent=GSCOCT00024224001 | |
| 14590 chr1 manual_curation CDS 29737143 29737265 . - 0 Parent=GSCOCT00024224001 | |
| 14591 chr1 manual_curation CDS 29737429 29737594 . - 2 Parent=GSCOCT00024224001 | |
| 14592 chr1 manual_curation CDS 29737698 29737801 . - 0 Parent=GSCOCT00024224001 | |
| 14593 chr1 manual_curation CDS 29738065 29738162 . - 1 Parent=GSCOCT00024224001 | |
| 14594 chr1 manual_curation CDS 29739131 29739336 . - 2 Parent=GSCOCT00024224001 | |
| 14595 chr1 manual_curation CDS 29739414 29739508 . - 0 Parent=GSCOCT00024224001 | |
| 14596 chr1 manual_curation CDS 29739977 29740093 . - 0 Parent=GSCOCT00024224001 | |
| 14597 chr1 manual_curation CDS 29740208 29740267 . - 0 Parent=GSCOCT00024224001 | |
| 14598 chr1 manual_curation CDS 29740939 29740992 . - 0 Parent=GSCOCT00024224001 | |
| 14599 chr1 manual_curation CDS 29741101 29741175 . - 0 Parent=GSCOCT00024224001 | |
| 14600 chr1 manual_curation CDS 29741255 29741330 . - 2 Parent=GSCOCT00024224001 | |
| 14601 chr1 manual_curation CDS 29741482 29741568 . - 2 Parent=GSCOCT00024224001 | |
| 14602 chr1 manual_curation CDS 29741750 29741853 . - 0 Parent=GSCOCT00024224001 | |
| 14603 chr1 manual_curation CDS 29742881 29742919 . - 0 Parent=GSCOCT00024224001 | |
| 14604 chr1 manual_curation gene 29749622 29752540 . + . ID=GSCOCG00024225001;Name=Cc01_g11070 | |
| 14605 chr1 manual_curation mRNA 29749622 29752540 . + . ID=GSCOCT00024225001;Parent=GSCOCG00024225001;Name=Cc01_g11070 | |
| 14606 chr1 manual_curation polypeptide 29749834 29752344 . + . ID=GSCOCP00024225001;Dbxref=InterPro:IPR006702,PFAM:PF04535,SwissProt:P0DI27,SwissProt:Q6NPF8,SwissProt:Q9SKN3,TAIR:AT2G28370.1,TAIR:AT2G37200.1,TAIR:AT3G23200.1,TrEMBL:C6T2V9,TrEMBL:C6T5C3,TrEMBL:I1LR40;Derives_from=GSCOCT00024225001;Name=Cc01_g11070;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:CASP-like protein At2g28370,CC_functional_completeness:complete,CC_gene:At2g28370,CC_gene:PtaqContig9166,CC_gene:At2g37200;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024225001~ CASP-like protein At2g28370~ At2g28370~ complete;original_location=join(2718719..2718945%2C2719737..2719869%2C2721038..2721229);owner=coffea | |
| 14607 chr1 manual_curation exon 29749622 29750060 . + . Parent=GSCOCT00024225001 | |
| 14608 chr1 manual_curation exon 29750852 29750984 . + . Parent=GSCOCT00024225001 | |
| 14609 chr1 manual_curation exon 29752153 29752540 . + . Parent=GSCOCT00024225001 | |
| 14610 chr1 manual_curation CDS 29749834 29750060 . + 0 Parent=GSCOCT00024225001 | |
| 14611 chr1 manual_curation CDS 29750852 29750984 . + 2 Parent=GSCOCT00024225001 | |
| 14612 chr1 manual_curation CDS 29752153 29752344 . + 0 Parent=GSCOCT00024225001 | |
| 14613 chr1 manual_curation gene 29753058 29754043 . + . ID=GSCOCG00024226001;Name=Cc01_g11080 | |
| 14614 chr1 manual_curation mRNA 29753058 29754043 . + . ID=GSCOCT00024226001;Parent=GSCOCG00024226001;Name=Cc01_g11080 | |
| 14615 chr1 manual_curation polypeptide 29753233 29754043 . + . ID=GSCOCP00024226001;Dbxref=GENE3D:G3DSA:1.10.20.10,InterPro:IPR003162,InterPro:IPR009072,PANTHER:PTHR12075,PFAM:PF02291;Derives_from=GSCOCT00024226001;Name=Cc01_g11080;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0006352,CC_EC_number:missing_EC_number,PRODUCT:Putative Transcription factor TAFII-31,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024226001~ Putative Transcription factor TAFII-31~ unknown_gene~ complete;original_location=join(2722118..2722328%2C2722645..2722928);owner=coffea | |
| 14616 chr1 manual_curation exon 29753058 29753443 . + . Parent=GSCOCT00024226001 | |
| 14617 chr1 manual_curation exon 29753760 29754043 . + . Parent=GSCOCT00024226001 | |
| 14618 chr1 manual_curation CDS 29753233 29753443 . + 0 Parent=GSCOCT00024226001 | |
| 14619 chr1 manual_curation CDS 29753760 29754043 . + 1 Parent=GSCOCT00024226001 | |
| 14620 chr1 manual_curation gene 29754327 29757522 . - . ID=GSCOCG00024227001;Name=Cc01_g11090 | |
| 14621 chr1 manual_curation mRNA 29754327 29757522 . - . ID=GSCOCT00024227001;Parent=GSCOCG00024227001;Name=Cc01_g11090 | |
| 14622 chr1 manual_curation polypeptide 29754534 29757522 . - . ID=GSCOCP00024227001;Dbxref=InterPro:IPR013978,PFAM:PF08670,SwissProt:A2XK30,SwissProt:Q6AST1,SwissProt:Q9SE43,TAIR:AT1G52150.2,TAIR:AT2G34710.1,TAIR:AT5G60690.1,TrEMBL:A5BNS2,TrEMBL:B9SVC7,TrEMBL:D7SKZ0;Derives_from=GSCOCT00024227001;Name=Cc01_g11090;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Homeobox-leucine zipper protein REVOLUTA,CC_functional_completeness:fragment,CC_gene:REV,CC_gene:HOX32;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024227001~ Homeobox-leucine zipper protein REVOLUTA~ REV~ fragment;original_location=complement(join(2726369..2726407%2C2726105..2726293%2C2725600..2725680%2C2725388..2725522%2C2724672..2725006%2C2724365..2724470%2C2723971..2724120%2C2723419..2723568));owner=coffea | |
| 14623 chr1 manual_curation exon 29754327 29754683 . - . Parent=GSCOCT00024227001 | |
| 14624 chr1 manual_curation exon 29755086 29755235 . - . Parent=GSCOCT00024227001 | |
| 14625 chr1 manual_curation exon 29755480 29755585 . - . Parent=GSCOCT00024227001 | |
| 14626 chr1 manual_curation exon 29755787 29756121 . - . Parent=GSCOCT00024227001 | |
| 14627 chr1 manual_curation exon 29756503 29756637 . - . Parent=GSCOCT00024227001 | |
| 14628 chr1 manual_curation exon 29756715 29756795 . - . Parent=GSCOCT00024227001 | |
| 14629 chr1 manual_curation exon 29757220 29757408 . - . Parent=GSCOCT00024227001 | |
| 14630 chr1 manual_curation exon 29757484 29757522 . - . Parent=GSCOCT00024227001 | |
| 14631 chr1 manual_curation CDS 29754534 29754683 . - 0 Parent=GSCOCT00024227001 | |
| 14632 chr1 manual_curation CDS 29755086 29755235 . - 0 Parent=GSCOCT00024227001 | |
| 14633 chr1 manual_curation CDS 29755480 29755585 . - 2 Parent=GSCOCT00024227001 | |
| 14634 chr1 manual_curation CDS 29755787 29756121 . - 0 Parent=GSCOCT00024227001 | |
| 14635 chr1 manual_curation CDS 29756503 29756637 . - 0 Parent=GSCOCT00024227001 | |
| 14636 chr1 manual_curation CDS 29756715 29756795 . - 0 Parent=GSCOCT00024227001 | |
| 14637 chr1 manual_curation CDS 29757220 29757408 . - 0 Parent=GSCOCT00024227001 | |
| 14638 chr1 manual_curation CDS 29757484 29757522 . - 0 Parent=GSCOCT00024227001 | |
| 14639 chr1 manual_curation gene 29757584 29762990 . - . ID=GSCOCG00024228001;Name=Cc01_g11100 | |
| 14640 chr1 manual_curation mRNA 29757584 29762990 . - . ID=GSCOCT00024228001;Parent=GSCOCG00024228001;Name=Cc01_g11100 | |
| 14641 chr1 manual_curation polypeptide 29757584 29762001 . - . ID=GSCOCP00024228001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001356,InterPro:IPR002913,InterPro:IPR009057,InterPro:IPR012287,PFAM:PF00046,PFAM:PF01852,PROFILE:PS50071,PROFILE:PS50848,SMART:SM00234,SMART:SM00389,SUPERFAMILY:SSF46689,SwissProt:A2XBL9,SwissProt:Q6TAQ6,SwissProt:Q9SE43,TAIR:AT1G30490.1,TAIR:AT2G34710.1,TAIR:AT5G60690.1,TrEMBL:B6DXL6,TrEMBL:Q8H962,TrEMBL:Q8VX29,TrEMBL:Q8VX31;Derives_from=GSCOCT00024228001;Name=Cc01_g11100;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,GO:0043565,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Homeobox-leucine zipper protein REVOLUTA,CC_functional_completeness:fragment,CC_gene:REV,CC_gene:HOX10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024228001~ Homeobox-leucine zipper protein REVOLUTA~ REV~ fragment;original_location=complement(join(2730648..2730886%2C2730112..2730271%2C2729499..2729587%2C2729275..2729365%2C2729046..2729141%2C2728799..2728912%2C2728630..2728713%2C2727892..2728047%2C2727737..2727811%2C2726840..2726946%2C2726469..2726706));owner=coffea | |
| 14642 chr1 manual_curation exon 29757584 29757821 . - . Parent=GSCOCT00024228001 | |
| 14643 chr1 manual_curation exon 29757955 29758061 . - . Parent=GSCOCT00024228001 | |
| 14644 chr1 manual_curation exon 29758852 29758926 . - . Parent=GSCOCT00024228001 | |
| 14645 chr1 manual_curation exon 29759007 29759162 . - . Parent=GSCOCT00024228001 | |
| 14646 chr1 manual_curation exon 29759745 29759828 . - . Parent=GSCOCT00024228001 | |
| 14647 chr1 manual_curation exon 29759914 29760027 . - . Parent=GSCOCT00024228001 | |
| 14648 chr1 manual_curation exon 29760161 29760256 . - . Parent=GSCOCT00024228001 | |
| 14649 chr1 manual_curation exon 29760390 29760480 . - . Parent=GSCOCT00024228001 | |
| 14650 chr1 manual_curation exon 29760614 29760702 . - . Parent=GSCOCT00024228001 | |
| 14651 chr1 manual_curation exon 29761227 29761386 . - . Parent=GSCOCT00024228001 | |
| 14652 chr1 manual_curation exon 29761763 29762990 . - . Parent=GSCOCT00024228001 | |
| 14653 chr1 manual_curation CDS 29757584 29757821 . - 2 Parent=GSCOCT00024228001 | |
| 14654 chr1 manual_curation CDS 29757955 29758061 . - 0 Parent=GSCOCT00024228001 | |
| 14655 chr1 manual_curation CDS 29758852 29758926 . - 0 Parent=GSCOCT00024228001 | |
| 14656 chr1 manual_curation CDS 29759007 29759162 . - 0 Parent=GSCOCT00024228001 | |
| 14657 chr1 manual_curation CDS 29759745 29759828 . - 0 Parent=GSCOCT00024228001 | |
| 14658 chr1 manual_curation CDS 29759914 29760027 . - 0 Parent=GSCOCT00024228001 | |
| 14659 chr1 manual_curation CDS 29760161 29760256 . - 0 Parent=GSCOCT00024228001 | |
| 14660 chr1 manual_curation CDS 29760390 29760480 . - 2 Parent=GSCOCT00024228001 | |
| 14661 chr1 manual_curation CDS 29760614 29760702 . - 0 Parent=GSCOCT00024228001 | |
| 14662 chr1 manual_curation CDS 29761227 29761386 . - 2 Parent=GSCOCT00024228001 | |
| 14663 chr1 manual_curation CDS 29761763 29762001 . - 0 Parent=GSCOCT00024228001 | |
| 14664 chr1 manual_curation gene 29854725 29857883 . + . ID=GSCOCG00024229001;Name=Cc01_g11110 | |
| 14665 chr1 manual_curation mRNA 29854725 29857883 . + . ID=GSCOCT00024229001;Parent=GSCOCG00024229001;Name=Cc01_g11110 | |
| 14666 chr1 manual_curation polypeptide 29854916 29857498 . + . ID=GSCOCP00024229001;Dbxref=GENE3D:G3DSA:1.20.1080.10,InterPro:IPR000425,InterPro:IPR012269,InterPro:IPR022357,PANTHER:PTHR19139,PFAM:PF00230,PRINTS:PR00783,PROSITE:PS00221,SUPERFAMILY:SSF81338,SwissProt:P43287,SwissProt:Q6K215,SwissProt:Q9ATM4,TAIR:AT2G37170.1,TAIR:AT2G37180.1,TAIR:AT3G53420.1,TIGRFAMs:TIGR00861,TrEMBL:I1JD72,TrEMBL:O65357,TrEMBL:Q84XC7;Derives_from=GSCOCT00024229001;Name=Cc01_g11110;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006810,GO:0016020,GO:0016021,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Aquaporin PIP2-2,CC_functional_completeness:complete,CC_gene:PIP2-2,CC_gene:PIP2-7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024229001~ Aquaporin PIP2-2~ PIP2-2~ complete;original_location=join(2823801..2824116%2C2824498..2824793%2C2825992..2826132%2C2826270..2826383);owner=coffea | |
| 14667 chr1 manual_curation exon 29854725 29855231 . + . Parent=GSCOCT00024229001 | |
| 14668 chr1 manual_curation exon 29855613 29855908 . + . Parent=GSCOCT00024229001 | |
| 14669 chr1 manual_curation exon 29857107 29857247 . + . Parent=GSCOCT00024229001 | |
| 14670 chr1 manual_curation exon 29857385 29857883 . + . Parent=GSCOCT00024229001 | |
| 14671 chr1 manual_curation CDS 29854916 29855231 . + 0 Parent=GSCOCT00024229001 | |
| 14672 chr1 manual_curation CDS 29855613 29855908 . + 1 Parent=GSCOCT00024229001 | |
| 14673 chr1 manual_curation CDS 29857107 29857247 . + 0 Parent=GSCOCT00024229001 | |
| 14674 chr1 manual_curation CDS 29857385 29857498 . + 0 Parent=GSCOCT00024229001 | |
| 14675 chr1 manual_curation gene 29862867 29864412 . + . ID=GSCOCG00024230001;Name=Cc01_g11120 | |
| 14676 chr1 manual_curation mRNA 29862867 29864412 . + . ID=GSCOCT00024230001;Parent=GSCOCG00024230001;Name=Cc01_g11120 | |
| 14677 chr1 manual_curation polypeptide 29862955 29863368 . + . ID=GSCOCP00024230001;Dbxref=TAIR:AT2G28410.1,TrEMBL:F6GU05,TrEMBL:G7IRR9,TrEMBL:I1LTI2;Derives_from=GSCOCT00024230001;Name=Cc01_g11120;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B Has 18 Blast hits to 18 proteins in 5 species,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024230001~ Putative unknown protein%3B Has 18 Blast hits to 18 proteins in 5 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 18%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ modules;original_location=2831840..2832253;owner=coffea | |
| 14678 chr1 manual_curation exon 29862867 29864412 . + . Parent=GSCOCT00024230001 | |
| 14679 chr1 manual_curation CDS 29862955 29863368 . + 0 Parent=GSCOCT00024230001 | |
| 14680 chr1 manual_curation gene 29864525 29865624 . - . ID=GSCOCG00024231001;Name=Cc01_g11130 | |
| 14681 chr1 manual_curation mRNA 29864525 29865624 . - . ID=GSCOCT00024231001;Parent=GSCOCG00024231001;Name=Cc01_g11130 | |
| 14682 chr1 manual_curation polypeptide 29864525 29865389 . - . ID=GSCOCP00024231001;Dbxref=TAIR:AT2G28430.1,TrEMBL:D7SKY4;Derives_from=GSCOCT00024231001;Name=Cc01_g11130;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B Has 28 Blast hits to 28 proteins in 12 species,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024231001~ Putative unknown protein%3B Has 28 Blast hits to 28 proteins in 12 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 28%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ fragment;original_location=complement(join(2834191..2834274%2C2833410..2833526));owner=coffea | |
| 14683 chr1 manual_curation exon 29864525 29864641 . - . Parent=GSCOCT00024231001 | |
| 14684 chr1 manual_curation exon 29865306 29865624 . - . Parent=GSCOCT00024231001 | |
| 14685 chr1 manual_curation CDS 29864525 29864641 . - 0 Parent=GSCOCT00024231001 | |
| 14686 chr1 manual_curation CDS 29865306 29865389 . - 0 Parent=GSCOCT00024231001 | |
| 14687 chr1 manual_curation gene 29866456 29871701 . + . ID=GSCOCG00024232001;Name=Cc01_g11140 | |
| 14688 chr1 manual_curation mRNA 29866456 29871701 . + . ID=GSCOCT00024232001;Parent=GSCOCG00024232001;Name=Cc01_g11140 | |
| 14689 chr1 manual_curation polypeptide 29866579 29871228 . + . ID=GSCOCP00024232001;Dbxref=GENE3D:G3DSA:3.40.30.10,InterPro:IPR005788,InterPro:IPR005792,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR013766,InterPro:IPR017936,InterPro:IPR017937,PFAM:PF00085,PRINTS:PR00421,PROFILE:PS51352,PROSITE:PS00194,SUPERFAMILY:SSF52833,SwissProt:Q67IX6,SwissProt:Q8VX13,SwissProt:Q9FF55,TAIR:AT1G52260.1,TAIR:AT3G54960.1,TAIR:AT5G60640.1,TIGRFAMs:TIGR01126,TIGRFAMs:TIGR01130,TrEMBL:B1Q2X5,TrEMBL:B9HQ95,TrEMBL:B9SWB5;Derives_from=GSCOCT00024232001;Name=Cc01_g11140;Ontology_term=CC_evidence_code:ISS,GO:0005783,GO:0016853,GO:0045454,CC_EC_number:5.3.4.1,PRODUCT:Protein disulfide isomerase-like 1-4,CC_functional_completeness:complete,CC_gene:PDIL1-4,CC_gene:PDIL1-3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024232001~ Protein disulfide isomerase-like 1-4~ PDIL1-4~ complete;original_location=join(2835464..2835624%2C2835697..2836074%2C2836760..2836889%2C2837337..2837502%2C2837582..2837700%2C2838131..2838211%2C2838756..2838842%2C2838938..2839012%2C2839125..2839193%2C2839278..2839358%2C2839462..2839596%2C2839780..2839836%2C2839946..2840113);owner=coffea | |
| 14690 chr1 manual_curation exon 29866456 29866739 . + . Parent=GSCOCT00024232001 | |
| 14691 chr1 manual_curation exon 29866812 29867189 . + . Parent=GSCOCT00024232001 | |
| 14692 chr1 manual_curation exon 29867875 29868004 . + . Parent=GSCOCT00024232001 | |
| 14693 chr1 manual_curation exon 29868452 29868617 . + . Parent=GSCOCT00024232001 | |
| 14694 chr1 manual_curation exon 29868697 29868815 . + . Parent=GSCOCT00024232001 | |
| 14695 chr1 manual_curation exon 29869246 29869326 . + . Parent=GSCOCT00024232001 | |
| 14696 chr1 manual_curation exon 29869871 29869957 . + . Parent=GSCOCT00024232001 | |
| 14697 chr1 manual_curation exon 29870053 29870127 . + . Parent=GSCOCT00024232001 | |
| 14698 chr1 manual_curation exon 29870240 29870308 . + . Parent=GSCOCT00024232001 | |
| 14699 chr1 manual_curation exon 29870393 29870473 . + . Parent=GSCOCT00024232001 | |
| 14700 chr1 manual_curation exon 29870577 29870711 . + . Parent=GSCOCT00024232001 | |
| 14701 chr1 manual_curation exon 29870895 29870951 . + . Parent=GSCOCT00024232001 | |
| 14702 chr1 manual_curation exon 29871061 29871701 . + . Parent=GSCOCT00024232001 | |
| 14703 chr1 manual_curation CDS 29866579 29866739 . + 0 Parent=GSCOCT00024232001 | |
| 14704 chr1 manual_curation CDS 29866812 29867189 . + 2 Parent=GSCOCT00024232001 | |
| 14705 chr1 manual_curation CDS 29867875 29868004 . + 2 Parent=GSCOCT00024232001 | |
| 14706 chr1 manual_curation CDS 29868452 29868617 . + 0 Parent=GSCOCT00024232001 | |
| 14707 chr1 manual_curation CDS 29868697 29868815 . + 1 Parent=GSCOCT00024232001 | |
| 14708 chr1 manual_curation CDS 29869246 29869326 . + 0 Parent=GSCOCT00024232001 | |
| 14709 chr1 manual_curation CDS 29869871 29869957 . + 0 Parent=GSCOCT00024232001 | |
| 14710 chr1 manual_curation CDS 29870053 29870127 . + 0 Parent=GSCOCT00024232001 | |
| 14711 chr1 manual_curation CDS 29870240 29870308 . + 0 Parent=GSCOCT00024232001 | |
| 14712 chr1 manual_curation CDS 29870393 29870473 . + 0 Parent=GSCOCT00024232001 | |
| 14713 chr1 manual_curation CDS 29870577 29870711 . + 0 Parent=GSCOCT00024232001 | |
| 14714 chr1 manual_curation CDS 29870895 29870951 . + 0 Parent=GSCOCT00024232001 | |
| 14715 chr1 manual_curation CDS 29871061 29871228 . + 0 Parent=GSCOCT00024232001 | |
| 14716 chr1 manual_curation gene 29875643 29876731 . + . ID=GSCOCG00024233001;Name=Cc01_g11150 | |
| 14717 chr1 manual_curation mRNA 29875643 29876731 . + . ID=GSCOCT00024233001;Parent=GSCOCG00024233001;Name=Cc01_g11150 | |
| 14718 chr1 manual_curation polypeptide 29875931 29876431 . + . ID=GSCOCP00024233001;Dbxref=TAIR:AT2G28440.1,TAIR:AT3G45230.1,TrEMBL:A9P8L3,TrEMBL:B9HQ96,TrEMBL:G7IRR5;Derives_from=GSCOCT00024233001;Name=Cc01_g11150;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024233001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=2844816..2845316;owner=coffea | |
| 14719 chr1 manual_curation exon 29875643 29876731 . + . Parent=GSCOCT00024233001 | |
| 14720 chr1 manual_curation CDS 29875931 29876431 . + 0 Parent=GSCOCT00024233001 | |
| 14721 chr1 manual_curation gene 29878188 29885110 . - . ID=GSCOCG00024234001;Name=Cc01_g11160 | |
| 14722 chr1 manual_curation mRNA 29878188 29885110 . - . ID=GSCOCT00024234001;Parent=GSCOCG00024234001;Name=Cc01_g11160 | |
| 14723 chr1 manual_curation polypeptide 29878721 29884667 . - . ID=GSCOCP00024234001;Dbxref=HAMAP:MF_00159,InterPro:IPR004588,InterPro:IPR011005,InterPro:IPR017178,PFAM:PF04551,PIR:PIRSF037336,SUPERFAMILY:SSF51717,SwissProt:F4K0E8,SwissProt:Q6K8J4,SwissProt:Q6MD85,TAIR:AT5G60600.1,TIGRFAMs:TIGR00612,TrEMBL:A9ZN14,TrEMBL:Q84XR5,TrEMBL:Q8GZR6;Derives_from=GSCOCT00024234001;Name=Cc01_g11160;Ontology_term=CC_evidence_code:ISS,GO:0005506,GO:0008299,GO:0016114,GO:0044237,GO:0046429,GO:0055114,CC_EC_number:1.17.4.3,PRODUCT:4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase%2C chloroplastic,CC_functional_completeness:complete,CC_gene:ISPG,CC_gene:ispG;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024234001~ 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase%2C chloroplastic~ ISPG~ complete;original_location=complement(join(2853345..2853552%2C2852875..2853032%2C2852014..2852120%2C2851822..2851922%2C2851669..2851745%2C2850816..2850935%2C2850501..2850731%2C2850105..2850221%2C2849947..2850021%2C2849769..2849846%2C2849605..2849664%2C2849453..2849515%2C2849141..2849258%2C2848898..2849036%2C2848542..2848619%2C2848289..2848448%2C2848096..2848194%2C2847879..2847983%2C2847606..2847707));owner=coffea | |
| 14724 chr1 manual_curation exon 29884931 29885110 . - . Parent=GSCOCT00024234001 | |
| 14725 chr1 manual_curation exon 29878188 29878822 . - . Parent=GSCOCT00024234001 | |
| 14726 chr1 manual_curation exon 29878994 29879098 . - . Parent=GSCOCT00024234001 | |
| 14727 chr1 manual_curation exon 29879211 29879309 . - . Parent=GSCOCT00024234001 | |
| 14728 chr1 manual_curation exon 29879404 29879563 . - . Parent=GSCOCT00024234001 | |
| 14729 chr1 manual_curation exon 29879657 29879734 . - . Parent=GSCOCT00024234001 | |
| 14730 chr1 manual_curation exon 29880013 29880151 . - . Parent=GSCOCT00024234001 | |
| 14731 chr1 manual_curation exon 29880256 29880373 . - . Parent=GSCOCT00024234001 | |
| 14732 chr1 manual_curation exon 29880568 29880630 . - . Parent=GSCOCT00024234001 | |
| 14733 chr1 manual_curation exon 29880720 29880779 . - . Parent=GSCOCT00024234001 | |
| 14734 chr1 manual_curation exon 29880884 29880961 . - . Parent=GSCOCT00024234001 | |
| 14735 chr1 manual_curation exon 29881062 29881136 . - . Parent=GSCOCT00024234001 | |
| 14736 chr1 manual_curation exon 29881220 29881336 . - . Parent=GSCOCT00024234001 | |
| 14737 chr1 manual_curation exon 29881616 29881846 . - . Parent=GSCOCT00024234001 | |
| 14738 chr1 manual_curation exon 29881931 29882050 . - . Parent=GSCOCT00024234001 | |
| 14739 chr1 manual_curation exon 29882784 29882860 . - . Parent=GSCOCT00024234001 | |
| 14740 chr1 manual_curation exon 29882937 29883037 . - . Parent=GSCOCT00024234001 | |
| 14741 chr1 manual_curation exon 29883129 29883235 . - . Parent=GSCOCT00024234001 | |
| 14742 chr1 manual_curation exon 29883990 29884147 . - . Parent=GSCOCT00024234001 | |
| 14743 chr1 manual_curation exon 29884460 29884698 . - . Parent=GSCOCT00024234001 | |
| 14744 chr1 manual_curation CDS 29878721 29878822 . - 0 Parent=GSCOCT00024234001 | |
| 14745 chr1 manual_curation CDS 29878994 29879098 . - 0 Parent=GSCOCT00024234001 | |
| 14746 chr1 manual_curation CDS 29879211 29879309 . - 0 Parent=GSCOCT00024234001 | |
| 14747 chr1 manual_curation CDS 29879404 29879563 . - 2 Parent=GSCOCT00024234001 | |
| 14748 chr1 manual_curation CDS 29879657 29879734 . - 2 Parent=GSCOCT00024234001 | |
| 14749 chr1 manual_curation CDS 29880013 29880151 . - 1 Parent=GSCOCT00024234001 | |
| 14750 chr1 manual_curation CDS 29880256 29880373 . - 0 Parent=GSCOCT00024234001 | |
| 14751 chr1 manual_curation CDS 29880568 29880630 . - 0 Parent=GSCOCT00024234001 | |
| 14752 chr1 manual_curation CDS 29880720 29880779 . - 0 Parent=GSCOCT00024234001 | |
| 14753 chr1 manual_curation CDS 29880884 29880961 . - 0 Parent=GSCOCT00024234001 | |
| 14754 chr1 manual_curation CDS 29881062 29881136 . - 0 Parent=GSCOCT00024234001 | |
| 14755 chr1 manual_curation CDS 29881220 29881336 . - 0 Parent=GSCOCT00024234001 | |
| 14756 chr1 manual_curation CDS 29881616 29881846 . - 0 Parent=GSCOCT00024234001 | |
| 14757 chr1 manual_curation CDS 29881931 29882050 . - 0 Parent=GSCOCT00024234001 | |
| 14758 chr1 manual_curation CDS 29882784 29882860 . - 1 Parent=GSCOCT00024234001 | |
| 14759 chr1 manual_curation CDS 29882937 29883037 . - 2 Parent=GSCOCT00024234001 | |
| 14760 chr1 manual_curation CDS 29883129 29883235 . - 0 Parent=GSCOCT00024234001 | |
| 14761 chr1 manual_curation CDS 29883990 29884147 . - 1 Parent=GSCOCT00024234001 | |
| 14762 chr1 manual_curation CDS 29884460 29884667 . - 0 Parent=GSCOCT00024234001 | |
| 14763 chr1 manual_curation gene 29888997 29893488 . - . ID=GSCOCG00024235001;Name=Cc01_g11170 | |
| 14764 chr1 manual_curation mRNA 29888997 29893488 . - . ID=GSCOCT00024235001;Parent=GSCOCG00024235001;Name=Cc01_g11170 | |
| 14765 chr1 manual_curation polypeptide 29889535 29893410 . - . ID=GSCOCP00024235001;Dbxref=InterPro:IPR001984,InterPro:IPR003593,InterPro:IPR010339,PFAM:PF06068,PRINTS:PR00830,SMART:SM00382,SwissProt:P60122,SwissProt:P60123,SwissProt:Q9DE26,TAIR:AT3G49830.1,TAIR:AT5G22330.1,TAIR:AT5G67630.1,TrEMBL:B9SCX8,TrEMBL:I1KGM6,TrEMBL:I1KV60;Derives_from=GSCOCT00024235001;Name=Cc01_g11170;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003678,GO:0004176,GO:0004252,GO:0005524,GO:0006508,GO:0017111,CC_EC_number:missing_EC_number,CC_EC_number:missing_EC_number,PRODUCT:RuvB-like 1,CC_functional_completeness:complete,CC_gene:ruvbl1,CC_gene:Ruvbl1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024235001~ RuvB-like 1~ ruvbl1~ complete;original_location=complement(join(2862215..2862295%2C2861682..2861870%2C2861365..2861523%2C2861129..2861278%2C2860720..2860875%2C2860174..2860308%2C2859853..2859918%2C2859662..2859768%2C2858994..2859093%2C2858808..2858899%2C2858650..2858719%2C2858420..2858509));owner=coffea | |
| 14766 chr1 manual_curation exon 29888997 29889624 . - . Parent=GSCOCT00024235001 | |
| 14767 chr1 manual_curation exon 29889765 29889834 . - . Parent=GSCOCT00024235001 | |
| 14768 chr1 manual_curation exon 29889923 29890014 . - . Parent=GSCOCT00024235001 | |
| 14769 chr1 manual_curation exon 29890109 29890208 . - . Parent=GSCOCT00024235001 | |
| 14770 chr1 manual_curation exon 29890777 29890883 . - . Parent=GSCOCT00024235001 | |
| 14771 chr1 manual_curation exon 29890968 29891033 . - . Parent=GSCOCT00024235001 | |
| 14772 chr1 manual_curation exon 29891289 29891423 . - . Parent=GSCOCT00024235001 | |
| 14773 chr1 manual_curation exon 29891835 29891990 . - . Parent=GSCOCT00024235001 | |
| 14774 chr1 manual_curation exon 29892244 29892393 . - . Parent=GSCOCT00024235001 | |
| 14775 chr1 manual_curation exon 29892480 29892638 . - . Parent=GSCOCT00024235001 | |
| 14776 chr1 manual_curation exon 29892797 29892985 . - . Parent=GSCOCT00024235001 | |
| 14777 chr1 manual_curation exon 29893330 29893488 . - . Parent=GSCOCT00024235001 | |
| 14778 chr1 manual_curation CDS 29889535 29889624 . - 0 Parent=GSCOCT00024235001 | |
| 14779 chr1 manual_curation CDS 29889765 29889834 . - 2 Parent=GSCOCT00024235001 | |
| 14780 chr1 manual_curation CDS 29889923 29890014 . - 0 Parent=GSCOCT00024235001 | |
| 14781 chr1 manual_curation CDS 29890109 29890208 . - 2 Parent=GSCOCT00024235001 | |
| 14782 chr1 manual_curation CDS 29890777 29890883 . - 0 Parent=GSCOCT00024235001 | |
| 14783 chr1 manual_curation CDS 29890968 29891033 . - 0 Parent=GSCOCT00024235001 | |
| 14784 chr1 manual_curation CDS 29891289 29891423 . - 0 Parent=GSCOCT00024235001 | |
| 14785 chr1 manual_curation CDS 29891835 29891990 . - 0 Parent=GSCOCT00024235001 | |
| 14786 chr1 manual_curation CDS 29892244 29892393 . - 0 Parent=GSCOCT00024235001 | |
| 14787 chr1 manual_curation CDS 29892480 29892638 . - 0 Parent=GSCOCT00024235001 | |
| 14788 chr1 manual_curation CDS 29892797 29892985 . - 0 Parent=GSCOCT00024235001 | |
| 14789 chr1 manual_curation CDS 29893330 29893410 . - 0 Parent=GSCOCT00024235001 | |
| 14790 chr1 manual_curation gene 29895035 29897239 . - . ID=GSCOCG00024236001;Name=Cc01_g11180 | |
| 14791 chr1 manual_curation mRNA 29895035 29897239 . - . ID=GSCOCT00024236001;Parent=GSCOCG00024236001;Name=Cc01_g11180 | |
| 14792 chr1 manual_curation polypeptide 29895333 29897014 . - . ID=GSCOCP00024236001;Dbxref=GENE3D:G3DSA:3.90.870.10,InterPro:IPR004388,InterPro:IPR006070,InterPro:IPR017945,PFAM:PF01300,PROFILE:PS51163,SUPERFAMILY:SSF55821,SwissProt:Q0VC80,SwissProt:Q499R4,SwissProt:Q86U90,TAIR:AT5G60590.2,TIGRFAMs:TIGR00057,TrEMBL:B9HPP8,TrEMBL:B9SWB8,TrEMBL:D7SKX9;Derives_from=GSCOCT00024236001;Name=Cc01_g11180;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative YrdC domain-containing protein%2C mitochondrial,CC_functional_completeness:fragment,CC_gene:Yrdc,CC_gene:YRDC;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024236001~ Putative YrdC domain-containing protein%2C mitochondrial~ Yrdc~ fragment;original_location=complement(join(2865736..2865899%2C2864907..2865082%2C2864360..2864651%2C2864218..2864284));owner=coffea | |
| 14793 chr1 manual_curation exon 29895035 29895399 . - . Parent=GSCOCT00024236001 | |
| 14794 chr1 manual_curation exon 29895475 29895766 . - . Parent=GSCOCT00024236001 | |
| 14795 chr1 manual_curation exon 29896022 29896197 . - . Parent=GSCOCT00024236001 | |
| 14796 chr1 manual_curation exon 29896851 29897239 . - . Parent=GSCOCT00024236001 | |
| 14797 chr1 manual_curation CDS 29895333 29895399 . - 2 Parent=GSCOCT00024236001 | |
| 14798 chr1 manual_curation CDS 29895475 29895766 . - 1 Parent=GSCOCT00024236001 | |
| 14799 chr1 manual_curation CDS 29896022 29896197 . - 2 Parent=GSCOCT00024236001 | |
| 14800 chr1 manual_curation CDS 29896851 29897014 . - 0 Parent=GSCOCT00024236001 | |
| 14801 chr1 manual_curation gene 29899748 29905508 . - . ID=GSCOCG00024237001;Name=Cc01_g11190 | |
| 14802 chr1 manual_curation mRNA 29899748 29905508 . - . ID=GSCOCT00024237001;Parent=GSCOCG00024237001;Name=Cc01_g11190 | |
| 14803 chr1 manual_curation polypeptide 29900000 29905076 . - . ID=GSCOCP00024237001;Dbxref=InterPro:IPR011016,InterPro:IPR018957,PFAM:PF00097,PROFILE:PS51292,SMART:SM00744,TAIR:AT3G09760.1,TAIR:AT5G03180.2,TAIR:AT5G60580.2,TrEMBL:B9HQ98,TrEMBL:B9SWB9,TrEMBL:F6GU03;Derives_from=GSCOCT00024237001;Name=Cc01_g11190;Ontology_term=CC_evidence_code:ISS,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:RING/U-box superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024237001~ RING/U-box superfamily protein~ unknown_gene~ complete;original_location=complement(join(2873848..2873961%2C2872506..2873009%2C2871946..2872111%2C2870922..2871240%2C2869870..2869942%2C2869707..2869797%2C2869489..2869568%2C2868885..2869148));owner=coffea | |
| 14804 chr1 manual_curation exon 29899748 29900263 . - . Parent=GSCOCT00024237001 | |
| 14805 chr1 manual_curation exon 29900604 29900683 . - . Parent=GSCOCT00024237001 | |
| 14806 chr1 manual_curation exon 29900822 29900912 . - . Parent=GSCOCT00024237001 | |
| 14807 chr1 manual_curation exon 29900985 29901057 . - . Parent=GSCOCT00024237001 | |
| 14808 chr1 manual_curation exon 29902037 29902355 . - . Parent=GSCOCT00024237001 | |
| 14809 chr1 manual_curation exon 29903061 29903226 . - . Parent=GSCOCT00024237001 | |
| 14810 chr1 manual_curation exon 29903621 29904124 . - . Parent=GSCOCT00024237001 | |
| 14811 chr1 manual_curation exon 29904963 29905508 . - . Parent=GSCOCT00024237001 | |
| 14812 chr1 manual_curation CDS 29900000 29900263 . - 0 Parent=GSCOCT00024237001 | |
| 14813 chr1 manual_curation CDS 29900604 29900683 . - 1 Parent=GSCOCT00024237001 | |
| 14814 chr1 manual_curation CDS 29900822 29900912 . - 0 Parent=GSCOCT00024237001 | |
| 14815 chr1 manual_curation CDS 29900985 29901057 . - 2 Parent=GSCOCT00024237001 | |
| 14816 chr1 manual_curation CDS 29902037 29902355 . - 1 Parent=GSCOCT00024237001 | |
| 14817 chr1 manual_curation CDS 29903061 29903226 . - 0 Parent=GSCOCT00024237001 | |
| 14818 chr1 manual_curation CDS 29903621 29904124 . - 0 Parent=GSCOCT00024237001 | |
| 14819 chr1 manual_curation CDS 29904963 29905076 . - 0 Parent=GSCOCT00024237001 | |
| 14820 chr1 manual_curation gene 29913433 29915732 . - . ID=GSCOCG00024238001;Name=Cc01_g11200 | |
| 14821 chr1 manual_curation mRNA 29913433 29915732 . - . ID=GSCOCT00024238001;Parent=GSCOCG00024238001;Name=Cc01_g11200 | |
| 14822 chr1 manual_curation polypeptide 29913767 29915352 . - . ID=GSCOCP00024238001;Dbxref=InterPro:IPR010280,PFAM:PF05958,PROSITE:PS01230,SwissProt:A4QP75,SwissProt:Q8IZ69,SwissProt:Q8L7S3,TAIR:AT2G28450.1,TrEMBL:B9HQA1,TrEMBL:B9SWC0,TrEMBL:F6GU02;Derives_from=GSCOCT00024238001;Name=Cc01_g11200;Ontology_term=CC_evidence_code:ISS,GO:0006396,GO:0008173,CC_EC_number:missing_EC_number,PRODUCT:Zinc finger CCCH domain-containing protein 24,CC_functional_completeness:fragment,CC_gene:At2g28450,CC_gene:TRMT2A,CC_gene:trmt2b;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024238001~ Zinc finger CCCH domain-containing protein 24~ At2g28450~ fragment;original_location=complement(join(2883926..2884237%2C2882987..2883030%2C2882652..2882901));owner=coffea | |
| 14823 chr1 manual_curation exon 29915641 29915732 . - . Parent=GSCOCT00024238001 | |
| 14824 chr1 manual_curation exon 29913433 29914016 . - . Parent=GSCOCT00024238001 | |
| 14825 chr1 manual_curation exon 29914102 29914145 . - . Parent=GSCOCT00024238001 | |
| 14826 chr1 manual_curation exon 29915041 29915364 . - . Parent=GSCOCT00024238001 | |
| 14827 chr1 manual_curation CDS 29913767 29914016 . - 2 Parent=GSCOCT00024238001 | |
| 14828 chr1 manual_curation CDS 29914102 29914145 . - 0 Parent=GSCOCT00024238001 | |
| 14829 chr1 manual_curation CDS 29915041 29915352 . - 0 Parent=GSCOCT00024238001 | |
| 14830 chr1 manual_curation gene 29922186 29927162 . - . ID=GSCOCG00024240001;Name=Cc01_g11210 | |
| 14831 chr1 manual_curation mRNA 29922186 29927162 . - . ID=GSCOCT00024240001;Parent=GSCOCG00024240001;Name=Cc01_g11210 | |
| 14832 chr1 manual_curation polypeptide 29922186 29927089 . - . ID=GSCOCP00024240001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR000571,InterPro:IPR007848,InterPro:IPR012677,PFAM:PF00076,PFAM:PF00642,PFAM:PF05175,PROFILE:PS50102,PROFILE:PS50103,SMART:SM00356,SMART:SM00360,SwissProt:Q8BNV1,SwissProt:Q8IZ69,SwissProt:Q8L7S3,TAIR:AT2G28450.1,TAIR:AT3G21300.1,TrEMBL:B9SWC0,TrEMBL:F6GU02,TrEMBL:I1LQW1;Derives_from=GSCOCT00024240001;Name=Cc01_g11210;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,GO:0008168,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Zinc finger CCCH domain-containing protein 24,CC_functional_completeness:fragment,CC_gene:At2g28450,CC_gene:TRMT2A,CC_gene:Trmt2a;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024240001~ Zinc finger CCCH domain-containing protein 24~ At2g28450~ fragment;original_location=complement(join(2895447..2895974%2C2894600..2894692%2C2894181..2894504%2C2893933..2894005%2C2893560..2893692%2C2893318..2893471%2C2893075..2893158%2C2892632..2892754%2C2891747..2891920%2C2891475..2891609%2C2891071..2891208));owner=coffea | |
| 14833 chr1 manual_curation exon 29922186 29922323 . - . Parent=GSCOCT00024240001 | |
| 14834 chr1 manual_curation exon 29922590 29922724 . - . Parent=GSCOCT00024240001 | |
| 14835 chr1 manual_curation exon 29922862 29923035 . - . Parent=GSCOCT00024240001 | |
| 14836 chr1 manual_curation exon 29923747 29923869 . - . Parent=GSCOCT00024240001 | |
| 14837 chr1 manual_curation exon 29924190 29924273 . - . Parent=GSCOCT00024240001 | |
| 14838 chr1 manual_curation exon 29924433 29924586 . - . Parent=GSCOCT00024240001 | |
| 14839 chr1 manual_curation exon 29924675 29924807 . - . Parent=GSCOCT00024240001 | |
| 14840 chr1 manual_curation exon 29925048 29925120 . - . Parent=GSCOCT00024240001 | |
| 14841 chr1 manual_curation exon 29925296 29925619 . - . Parent=GSCOCT00024240001 | |
| 14842 chr1 manual_curation exon 29925715 29925807 . - . Parent=GSCOCT00024240001 | |
| 14843 chr1 manual_curation exon 29926562 29927162 . - . Parent=GSCOCT00024240001 | |
| 14844 chr1 manual_curation CDS 29922186 29922323 . - 0 Parent=GSCOCT00024240001 | |
| 14845 chr1 manual_curation CDS 29922590 29922724 . - 0 Parent=GSCOCT00024240001 | |
| 14846 chr1 manual_curation CDS 29922862 29923035 . - 0 Parent=GSCOCT00024240001 | |
| 14847 chr1 manual_curation CDS 29923747 29923869 . - 0 Parent=GSCOCT00024240001 | |
| 14848 chr1 manual_curation CDS 29924190 29924273 . - 0 Parent=GSCOCT00024240001 | |
| 14849 chr1 manual_curation CDS 29924433 29924586 . - 2 Parent=GSCOCT00024240001 | |
| 14850 chr1 manual_curation CDS 29924675 29924807 . - 1 Parent=GSCOCT00024240001 | |
| 14851 chr1 manual_curation CDS 29925048 29925120 . - 0 Parent=GSCOCT00024240001 | |
| 14852 chr1 manual_curation CDS 29925296 29925619 . - 0 Parent=GSCOCT00024240001 | |
| 14853 chr1 manual_curation CDS 29925715 29925807 . - 0 Parent=GSCOCT00024240001 | |
| 14854 chr1 manual_curation CDS 29926562 29927089 . - 0 Parent=GSCOCT00024240001 | |
| 14855 chr1 manual_curation gene 29932432 29934724 . + . ID=GSCOCG00024241001;Name=Cc01_g11220 | |
| 14856 chr1 manual_curation mRNA 29932432 29934724 . + . ID=GSCOCT00024241001;Parent=GSCOCG00024241001;Name=Cc01_g11220 | |
| 14857 chr1 manual_curation polypeptide 29932956 29934359 . + . ID=GSCOCP00024241001;Dbxref=InterPro:IPR013216,PFAM:PF08241,TAIR:AT3G53400.1,TAIR:AT5G01710.1,TAIR:AT5G03190.2,TrEMBL:B9MTB2,TrEMBL:B9S0M5,TrEMBL:F6GU01;Derives_from=GSCOCT00024241001;Name=Cc01_g11220;Ontology_term=CC_evidence_code:ISS,GO:0008152,GO:0008168,CC_EC_number:missing_EC_number,PRODUCT:Putative BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024241001~ Putative BEST Arabidopsis thaliana protein match is: conserved peptide upstream open reading frame 47 (TAIR:AT5G03190.1)%3B Has 285 Blast hits to 285 proteins in 23 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 1%3B Fungi - 0%3B Plants - 279%3B Viruses - 0%3B Other Eukaryotes - 5 (source: NCBI BLink).~ unknown_gene~ complete;original_location=2901841..2903244;owner=coffea | |
| 14858 chr1 manual_curation exon 29932432 29934724 . + . Parent=GSCOCT00024241001 | |
| 14859 chr1 manual_curation CDS 29932956 29934359 . + 0 Parent=GSCOCT00024241001 | |
| 14860 chr1 manual_curation gene 29939801 29940949 . - . ID=GSCOCG00024243001;Name=Cc01_g11230 | |
| 14861 chr1 manual_curation mRNA 29939801 29940949 . - . ID=GSCOCT00024243001;Parent=GSCOCG00024243001;Name=Cc01_g11230 | |
| 14862 chr1 manual_curation polypeptide 29939801 29940949 . - . ID=GSCOCP00024243001;Dbxref=GENE3D:G3DSA:2.120.10.80,InterPro:IPR006652,InterPro:IPR011043,InterPro:IPR015915,PFAM:PF01344,SMART:SM00612,SUPERFAMILY:SSF50965,SwissProt:Q84M94,SwissProt:Q8L736,SwissProt:Q9FKJ0,TAIR:AT1G14330.1,TAIR:AT1G26930.1,TAIR:AT5G60570.1,TrEMBL:B9SWC2,TrEMBL:D7SKX3,TrEMBL:I1M4L4;Derives_from=GSCOCT00024243001;Name=Cc01_g11230;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:F-box/kelch-repeat protein At5g60570,CC_functional_completeness:complete,CC_gene:At5g60570,CC_gene:At1g26930,CC_gene:SKIP11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024243001~ F-box/kelch-repeat protein At5g60570~ At5g60570~ complete;original_location=complement(2908686..2909834);owner=coffea | |
| 14863 chr1 manual_curation exon 29939801 29940949 . - . Parent=GSCOCT00024243001 | |
| 14864 chr1 manual_curation CDS 29939801 29940949 . - 0 Parent=GSCOCT00024243001 | |
| 14865 chr1 manual_curation gene 29947023 29952268 . - . ID=GSCOCG00024246001;Name=Cc01_g11240 | |
| 14866 chr1 manual_curation mRNA 29947023 29952268 . - . ID=GSCOCT00024246001;Parent=GSCOCG00024246001;Name=Cc01_g11240 | |
| 14867 chr1 manual_curation polypeptide 29947252 29951327 . - . ID=GSCOCP00024246001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,InterPro:IPR020636,InterPro:IPR020657,PANTHER:PTHR22982,PANTHER:PTHR22982:SF40,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:P50526,SwissProt:Q54WW7,SwissProt:Q8C078,TAIR:AT3G01090.2,TAIR:AT3G45240.1,TAIR:AT5G60550.1,TrEMBL:A5ATS4,TrEMBL:B9SWC3,TrEMBL:F6GTZ9;Derives_from=GSCOCT00024246001;Name=Cc01_g11240;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.17,PRODUCT:geminivirus rep interacting kinase 2,CC_functional_completeness:complete,CC_gene:DDB_G0279405,CC_gene:ssp1,CC_gene:Camkk2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024246001~ geminivirus rep interacting kinase 2~ DDB_G0279405~ complete;original_location=complement(join(2919922..2920212%2C2919750..2919824%2C2919612..2919656%2C2919111..2919185%2C2918705..2918792%2C2918378..2918502%2C2917326..2917421%2C2916895..2916961%2C2916662..2916777%2C2916443..2916521%2C2916137..2916291));owner=coffea | |
| 14868 chr1 manual_curation exon 29951547 29951716 . - . Parent=GSCOCT00024246001 | |
| 14869 chr1 manual_curation exon 29952025 29952268 . - . Parent=GSCOCT00024246001 | |
| 14870 chr1 manual_curation exon 29947023 29947406 . - . Parent=GSCOCT00024246001 | |
| 14871 chr1 manual_curation exon 29947558 29947636 . - . Parent=GSCOCT00024246001 | |
| 14872 chr1 manual_curation exon 29947777 29947892 . - . Parent=GSCOCT00024246001 | |
| 14873 chr1 manual_curation exon 29948010 29948076 . - . Parent=GSCOCT00024246001 | |
| 14874 chr1 manual_curation exon 29948441 29948536 . - . Parent=GSCOCT00024246001 | |
| 14875 chr1 manual_curation exon 29949493 29949617 . - . Parent=GSCOCT00024246001 | |
| 14876 chr1 manual_curation exon 29949820 29949907 . - . Parent=GSCOCT00024246001 | |
| 14877 chr1 manual_curation exon 29950226 29950300 . - . Parent=GSCOCT00024246001 | |
| 14878 chr1 manual_curation exon 29950727 29950771 . - . Parent=GSCOCT00024246001 | |
| 14879 chr1 manual_curation exon 29950865 29950939 . - . Parent=GSCOCT00024246001 | |
| 14880 chr1 manual_curation exon 29951037 29951423 . - . Parent=GSCOCT00024246001 | |
| 14881 chr1 manual_curation CDS 29947252 29947406 . - 1 Parent=GSCOCT00024246001 | |
| 14882 chr1 manual_curation CDS 29947558 29947636 . - 0 Parent=GSCOCT00024246001 | |
| 14883 chr1 manual_curation CDS 29947777 29947892 . - 1 Parent=GSCOCT00024246001 | |
| 14884 chr1 manual_curation CDS 29948010 29948076 . - 0 Parent=GSCOCT00024246001 | |
| 14885 chr1 manual_curation CDS 29948441 29948536 . - 0 Parent=GSCOCT00024246001 | |
| 14886 chr1 manual_curation CDS 29949493 29949617 . - 1 Parent=GSCOCT00024246001 | |
| 14887 chr1 manual_curation CDS 29949820 29949907 . - 0 Parent=GSCOCT00024246001 | |
| 14888 chr1 manual_curation CDS 29950226 29950300 . - 0 Parent=GSCOCT00024246001 | |
| 14889 chr1 manual_curation CDS 29950727 29950771 . - 0 Parent=GSCOCT00024246001 | |
| 14890 chr1 manual_curation CDS 29950865 29950939 . - 0 Parent=GSCOCT00024246001 | |
| 14891 chr1 manual_curation CDS 29951037 29951327 . - 0 Parent=GSCOCT00024246001 | |
| 14892 chr1 manual_curation gene 29954590 29958641 . + . ID=GSCOCG00024248001;Name=Cc01_g11250 | |
| 14893 chr1 manual_curation mRNA 29954590 29958641 . + . ID=GSCOCT00024248001;Parent=GSCOCG00024248001;Name=Cc01_g11250 | |
| 14894 chr1 manual_curation polypeptide 29954859 29958175 . + . ID=GSCOCP00024248001;Dbxref=HAMAP:MF_01615,InterPro:IPR002161,InterPro:IPR021196,PFAM:PF01174,PIR:PIRSF005639,PROFILE:PS51130,PROSITE:PS01236,SwissProt:A5D6D2,SwissProt:Q3Z8V9,SwissProt:Q8LAD0,TAIR:AT5G60540.1,TIGRFAMs:TIGR03800,TrEMBL:B9HQA4,TrEMBL:F6GTZ8,TrEMBL:Q6QND2;Derives_from=GSCOCT00024248001;Name=Cc01_g11250;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pyridoxal biosynthesis protein PDX2,CC_functional_completeness:complete,CC_gene:PDX2,CC_gene:pdxT;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024248001~ Pyridoxal biosynthesis protein PDX2~ PDX2~ complete;original_location=join(2923744..2923795%2C2923888..2924015%2C2924581..2924668%2C2924775..2924848%2C2925216..2925407%2C2926765..2926862%2C2926937..2927060);owner=coffea | |
| 14895 chr1 manual_curation exon 29954590 29954910 . + . Parent=GSCOCT00024248001 | |
| 14896 chr1 manual_curation exon 29955003 29955130 . + . Parent=GSCOCT00024248001 | |
| 14897 chr1 manual_curation exon 29955696 29955783 . + . Parent=GSCOCT00024248001 | |
| 14898 chr1 manual_curation exon 29955890 29955963 . + . Parent=GSCOCT00024248001 | |
| 14899 chr1 manual_curation exon 29956331 29956522 . + . Parent=GSCOCT00024248001 | |
| 14900 chr1 manual_curation exon 29957880 29957977 . + . Parent=GSCOCT00024248001 | |
| 14901 chr1 manual_curation exon 29958052 29958641 . + . Parent=GSCOCT00024248001 | |
| 14902 chr1 manual_curation CDS 29954859 29954910 . + 0 Parent=GSCOCT00024248001 | |
| 14903 chr1 manual_curation CDS 29955003 29955130 . + 1 Parent=GSCOCT00024248001 | |
| 14904 chr1 manual_curation CDS 29955696 29955783 . + 0 Parent=GSCOCT00024248001 | |
| 14905 chr1 manual_curation CDS 29955890 29955963 . + 1 Parent=GSCOCT00024248001 | |
| 14906 chr1 manual_curation CDS 29956331 29956522 . + 0 Parent=GSCOCT00024248001 | |
| 14907 chr1 manual_curation CDS 29957880 29957977 . + 0 Parent=GSCOCT00024248001 | |
| 14908 chr1 manual_curation CDS 29958052 29958175 . + 2 Parent=GSCOCT00024248001 | |
| 14909 chr1 manual_curation gene 29965594 29965854 . + . ID=GSCOCG00024251001;Name=Cc01_g11260 | |
| 14910 chr1 manual_curation mRNA 29965594 29965854 . + . ID=GSCOCT00024251001;Parent=GSCOCG00024251001;Name=Cc01_g11260 | |
| 14911 chr1 manual_curation polypeptide 29965594 29965854 . + . ID=GSCOCP00024251001;Derives_from=GSCOCT00024251001;Name=Cc01_g11260;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024251001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=2934479..2934739;owner=coffea | |
| 14912 chr1 manual_curation exon 29965594 29965854 . + . Parent=GSCOCT00024251001 | |
| 14913 chr1 manual_curation CDS 29965594 29965854 . + 0 Parent=GSCOCT00024251001 | |
| 14914 chr1 manual_curation gene 29966070 29972775 . - . ID=GSCOCG00024252001;Name=Cc01_g11270 | |
| 14915 chr1 manual_curation mRNA 29966070 29972775 . - . ID=GSCOCT00024252001;Parent=GSCOCG00024252001;Name=Cc01_g11270 | |
| 14916 chr1 manual_curation polypeptide 29966135 29972775 . - . ID=GSCOCP00024252001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR000922,InterPro:IPR001944,InterPro:IPR008979,InterPro:IPR013781,InterPro:IPR017853,InterPro:IPR019801,PANTHER:PTHR23421,PFAM:PF01301,PFAM:PF02140,PRINTS:PR00742,PROFILE:PS50228,PROSITE:PS01182,SUPERFAMILY:SSF49785,SUPERFAMILY:SSF51445,SwissProt:P45582,SwissProt:Q10NX8,SwissProt:Q9SCV4,TAIR:AT2G28470.1,TAIR:AT3G13750.1,TAIR:AT4G36360.1,TrEMBL:D7SKW9,TrEMBL:E3UVW7,TrEMBL:Q9LLT0;Derives_from=GSCOCT00024252001;Name=Cc01_g11270;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005529,GO:0005975,GO:0043169,CC_EC_number:3.2.1.23,PRODUCT:Beta-galactosidase 8,CC_functional_completeness:complete,CC_gene:BGAL8,CC_gene:Os03g0255100;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024252001~ Beta-galactosidase 8~ BGAL8~ complete;original_location=complement(join(2941496..2941660%2C2941259..2941354%2C2940793..2940905%2C2940600..2940666%2C2940427..2940519%2C2940166..2940315%2C2939945..2940033%2C2939719..2939824%2C2939516..2939603%2C2939074..2939192%2C2938718..2938882%2C2938409..2938596%2C2938207..2938316%2C2937056..2937165%2C2936760..2936873%2C2936450..2936551%2C2935638..2935849%2C2935234..2935570%2C2935020..2935127));owner=coffea | |
| 14917 chr1 manual_curation exon 29966070 29966242 . - . Parent=GSCOCT00024252001 | |
| 14918 chr1 manual_curation exon 29966349 29966685 . - . Parent=GSCOCT00024252001 | |
| 14919 chr1 manual_curation exon 29966753 29966964 . - . Parent=GSCOCT00024252001 | |
| 14920 chr1 manual_curation exon 29967565 29967666 . - . Parent=GSCOCT00024252001 | |
| 14921 chr1 manual_curation exon 29967875 29967988 . - . Parent=GSCOCT00024252001 | |
| 14922 chr1 manual_curation exon 29968171 29968280 . - . Parent=GSCOCT00024252001 | |
| 14923 chr1 manual_curation exon 29969322 29969431 . - . Parent=GSCOCT00024252001 | |
| 14924 chr1 manual_curation exon 29969524 29969711 . - . Parent=GSCOCT00024252001 | |
| 14925 chr1 manual_curation exon 29969833 29969997 . - . Parent=GSCOCT00024252001 | |
| 14926 chr1 manual_curation exon 29970189 29970307 . - . Parent=GSCOCT00024252001 | |
| 14927 chr1 manual_curation exon 29970631 29970718 . - . Parent=GSCOCT00024252001 | |
| 14928 chr1 manual_curation exon 29970834 29970939 . - . Parent=GSCOCT00024252001 | |
| 14929 chr1 manual_curation exon 29971060 29971148 . - . Parent=GSCOCT00024252001 | |
| 14930 chr1 manual_curation exon 29971281 29971430 . - . Parent=GSCOCT00024252001 | |
| 14931 chr1 manual_curation exon 29971542 29971634 . - . Parent=GSCOCT00024252001 | |
| 14932 chr1 manual_curation exon 29971715 29971781 . - . Parent=GSCOCT00024252001 | |
| 14933 chr1 manual_curation exon 29971908 29972020 . - . Parent=GSCOCT00024252001 | |
| 14934 chr1 manual_curation exon 29972374 29972469 . - . Parent=GSCOCT00024252001 | |
| 14935 chr1 manual_curation exon 29972611 29972775 . - . Parent=GSCOCT00024252001 | |
| 14936 chr1 manual_curation CDS 29966135 29966242 . - 0 Parent=GSCOCT00024252001 | |
| 14937 chr1 manual_curation CDS 29966349 29966685 . - 2 Parent=GSCOCT00024252001 | |
| 14938 chr1 manual_curation CDS 29966753 29966964 . - 0 Parent=GSCOCT00024252001 | |
| 14939 chr1 manual_curation CDS 29967565 29967666 . - 0 Parent=GSCOCT00024252001 | |
| 14940 chr1 manual_curation CDS 29967875 29967988 . - 0 Parent=GSCOCT00024252001 | |
| 14941 chr1 manual_curation CDS 29968171 29968280 . - 1 Parent=GSCOCT00024252001 | |
| 14942 chr1 manual_curation CDS 29969322 29969431 . - 2 Parent=GSCOCT00024252001 | |
| 14943 chr1 manual_curation CDS 29969524 29969711 . - 0 Parent=GSCOCT00024252001 | |
| 14944 chr1 manual_curation CDS 29969833 29969997 . - 0 Parent=GSCOCT00024252001 | |
| 14945 chr1 manual_curation CDS 29970189 29970307 . - 1 Parent=GSCOCT00024252001 | |
| 14946 chr1 manual_curation CDS 29970631 29970718 . - 0 Parent=GSCOCT00024252001 | |
| 14947 chr1 manual_curation CDS 29970834 29970939 . - 2 Parent=GSCOCT00024252001 | |
| 14948 chr1 manual_curation CDS 29971060 29971148 . - 0 Parent=GSCOCT00024252001 | |
| 14949 chr1 manual_curation CDS 29971281 29971430 . - 0 Parent=GSCOCT00024252001 | |
| 14950 chr1 manual_curation CDS 29971542 29971634 . - 0 Parent=GSCOCT00024252001 | |
| 14951 chr1 manual_curation CDS 29971715 29971781 . - 2 Parent=GSCOCT00024252001 | |
| 14952 chr1 manual_curation CDS 29971908 29972020 . - 0 Parent=GSCOCT00024252001 | |
| 14953 chr1 manual_curation CDS 29972374 29972469 . - 0 Parent=GSCOCT00024252001 | |
| 14954 chr1 manual_curation CDS 29972611 29972775 . - 0 Parent=GSCOCT00024252001 | |
| 14955 chr1 manual_curation gene 29972827 29973519 . + . ID=GSCOCG00024253001;Name=Cc01_g11280 | |
| 14956 chr1 manual_curation mRNA 29972827 29973519 . + . ID=GSCOCT00024253001;Parent=GSCOCG00024253001;Name=Cc01_g11280 | |
| 14957 chr1 manual_curation polypeptide 29973322 29973519 . + . ID=GSCOCP00024253001;Derives_from=GSCOCT00024253001;Name=Cc01_g11280;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024253001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=2942207..2942404;owner=coffea | |
| 14958 chr1 manual_curation exon 29972827 29973519 . + . Parent=GSCOCT00024253001 | |
| 14959 chr1 manual_curation CDS 29973322 29973519 . + 0 Parent=GSCOCT00024253001 | |
| 14960 chr1 manual_curation gene 29983279 29987068 . + . ID=GSCOCG00024254001;Name=Cc01_g11290 | |
| 14961 chr1 manual_curation mRNA 29983279 29987068 . + . ID=GSCOCT00024254001;Parent=GSCOCG00024254001;Name=Cc01_g11290 | |
| 14962 chr1 manual_curation polypeptide 29983429 29986687 . + . ID=GSCOCP00024254001;Dbxref=GENE3D:G3DSA:1.10.20.10,InterPro:IPR003958,InterPro:IPR009072,PFAM:PF00808,SUPERFAMILY:SSF47113,TAIR:AT1G07980.1,TrEMBL:B9HQA8,TrEMBL:B9T2Z4,TrEMBL:I1LL70;Derives_from=GSCOCT00024254001;Name=Cc01_g11290;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0005622,GO:0043565,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024254001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(2952314..2952928%2C2954881..2954965%2C2955367..2955408%2C2955514..2955572);owner=coffea | |
| 14963 chr1 manual_curation exon 29983279 29984043 . + . Parent=GSCOCT00024254001 | |
| 14964 chr1 manual_curation exon 29985996 29986080 . + . Parent=GSCOCT00024254001 | |
| 14965 chr1 manual_curation exon 29986482 29986523 . + . Parent=GSCOCT00024254001 | |
| 14966 chr1 manual_curation exon 29986629 29987068 . + . Parent=GSCOCT00024254001 | |
| 14967 chr1 manual_curation CDS 29983429 29984043 . + 0 Parent=GSCOCT00024254001 | |
| 14968 chr1 manual_curation CDS 29985996 29986080 . + 0 Parent=GSCOCT00024254001 | |
| 14969 chr1 manual_curation CDS 29986482 29986523 . + 1 Parent=GSCOCT00024254001 | |
| 14970 chr1 manual_curation CDS 29986629 29986687 . + 1 Parent=GSCOCT00024254001 | |
| 14971 chr1 manual_curation gene 29992214 29993300 . + . ID=GSCOCG00024256001;Name=Cc01_g11300 | |
| 14972 chr1 manual_curation mRNA 29992214 29993300 . + . ID=GSCOCT00024256001;Parent=GSCOCG00024256001;Name=Cc01_g11300 | |
| 14973 chr1 manual_curation polypeptide 29992284 29993018 . + . ID=GSCOCP00024256001;Dbxref=InterPro:IPR000782,PFAM:PF02469,PROFILE:PS50213,SMART:SM00554,SUPERFAMILY:SSF82153,SwissProt:Q8LEE9,SwissProt:Q8LEJ6,SwissProt:Q9SIL7,TAIR:AT2G20520.1,TAIR:AT5G03170.1,TAIR:AT5G60490.1,TrEMBL:A9XTK6,TrEMBL:F6GTZ7,TrEMBL:Q6J193;Derives_from=GSCOCT00024256001;Name=Cc01_g11300;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Fasciclin-like arabinogalactan protein 11,CC_functional_completeness:complete,CC_gene:FLA11,CC_gene:FLA12,CC_gene:FLA6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024256001~ Fasciclin-like arabinogalactan protein 11~ FLA11~ complete;original_location=2961169..2961903;owner=coffea | |
| 14974 chr1 manual_curation exon 29992214 29993300 . + . Parent=GSCOCT00024256001 | |
| 14975 chr1 manual_curation CDS 29992284 29993018 . + 0 Parent=GSCOCT00024256001 | |
| 14976 chr1 manual_curation gene 29998357 30000768 . - . ID=GSCOCG00024258001;Name=Cc01_g11310 | |
| 14977 chr1 manual_curation mRNA 29998357 30000768 . - . ID=GSCOCT00024258001;Parent=GSCOCG00024258001;Name=Cc01_g11310 | |
| 14978 chr1 manual_curation polypeptide 29998357 29999958 . - . ID=GSCOCP00024258001;Dbxref=InterPro:IPR007087,InterPro:IPR015880,PROFILE:PS50157,PROSITE:PS00028,SMART:SM00355,SwissProt:Q700D2,SwissProt:Q9FFH3,SwissProt:Q9ZWA6,TAIR:AT2G02080.1,TAIR:AT3G45260.1,TAIR:AT5G03150.1,TrEMBL:B9S0N0,TrEMBL:B9T2Y0,TrEMBL:F6GTZ5;Derives_from=GSCOCT00024258001;Name=Cc01_g11310;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:JKD,CC_gene:MGP,CC_gene:NUC;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024258001~ Putative uncharacterized protein~ JKD~ complete;original_location=complement(join(2968488..2968843%2C2967242..2968265));owner=coffea | |
| 14979 chr1 manual_curation exon 29998357 29999380 . - . Parent=GSCOCT00024258001 | |
| 14980 chr1 manual_curation exon 29999603 30000768 . - . Parent=GSCOCT00024258001 | |
| 14981 chr1 manual_curation CDS 29998357 29999380 . - 2 Parent=GSCOCT00024258001 | |
| 14982 chr1 manual_curation CDS 29999603 29999958 . - 0 Parent=GSCOCT00024258001 | |
| 14983 chr1 manual_curation gene 30014551 30016018 . + . ID=GSCOCG00024259001;Name=Cc01_g11320 | |
| 14984 chr1 manual_curation mRNA 30014551 30016018 . + . ID=GSCOCT00024259001;Parent=GSCOCG00024259001;Name=Cc01_g11320 | |
| 14985 chr1 manual_curation polypeptide 30014551 30016018 . + . ID=GSCOCP00024259001;Dbxref=InterPro:IPR003441,PFAM:PF02365,PROFILE:PS51005,SUPERFAMILY:SSF101941,SwissProt:O49255,SwissProt:Q52QH4,SwissProt:Q9C932,TAIR:AT1G52890.1,TAIR:AT1G61110.1,TAIR:AT1G69490.1,TrEMBL:B9SK58,TrEMBL:F6GTZ4,TrEMBL:F6HR10;Derives_from=GSCOCT00024259001;Name=Cc01_g11320;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:NAC029,CC_gene:NAC68,CC_gene:NAC019;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024259001~ Putative uncharacterized protein~ NAC029~ complete;original_location=join(2983436..2983607%2C2983712..2983995%2C2984322..2984903);owner=coffea | |
| 14986 chr1 manual_curation exon 30014551 30014722 . + . Parent=GSCOCT00024259001 | |
| 14987 chr1 manual_curation exon 30014827 30015110 . + . Parent=GSCOCT00024259001 | |
| 14988 chr1 manual_curation exon 30015437 30016018 . + . Parent=GSCOCT00024259001 | |
| 14989 chr1 manual_curation CDS 30014551 30014722 . + 0 Parent=GSCOCT00024259001 | |
| 14990 chr1 manual_curation CDS 30014827 30015110 . + 1 Parent=GSCOCT00024259001 | |
| 14991 chr1 manual_curation CDS 30015437 30016018 . + 0 Parent=GSCOCT00024259001 | |
| 14992 chr1 manual_curation gene 30016937 30017407 . - . ID=GSCOCG00024260001;Name=Cc01_g11330 | |
| 14993 chr1 manual_curation mRNA 30016937 30017407 . - . ID=GSCOCT00024260001;Parent=GSCOCG00024260001;Name=Cc01_g11330 | |
| 14994 chr1 manual_curation polypeptide 30016937 30017407 . - . ID=GSCOCP00024260001;Derives_from=GSCOCT00024260001;Name=Cc01_g11330;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024260001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(2986256..2986292%2C2985822..2985940));owner=coffea | |
| 14995 chr1 manual_curation exon 30016937 30017055 . - . Parent=GSCOCT00024260001 | |
| 14996 chr1 manual_curation exon 30017371 30017407 . - . Parent=GSCOCT00024260001 | |
| 14997 chr1 manual_curation CDS 30016937 30017055 . - 1 Parent=GSCOCT00024260001 | |
| 14998 chr1 manual_curation CDS 30017371 30017407 . - 0 Parent=GSCOCT00024260001 | |
| 14999 chr1 manual_curation gene 30017472 30019343 . - . ID=GSCOCG00024261001;Name=Cc01_g11340 | |
| 15000 chr1 manual_curation mRNA 30017472 30019343 . - . ID=GSCOCT00024261001;Parent=GSCOCG00024261001;Name=Cc01_g11340 | |
| 15001 chr1 manual_curation polypeptide 30017472 30019343 . - . ID=GSCOCP00024261001;Dbxref=GENE3D:G3DSA:3.10.110.10,InterPro:IPR000608,InterPro:IPR015582,InterPro:IPR016135,PANTHER:PTHR11621:SF26,PFAM:PF00179,PROFILE:PS50127,SUPERFAMILY:SSF54495,SwissProt:P56616,SwissProt:Q94KK6,SwissProt:Q9SF29,TAIR:AT1G50490.1,TAIR:AT3G09740.1,TAIR:AT3G45280.1,TrEMBL:B9S0N2,TrEMBL:B9SK57,TrEMBL:D7SKW3;Derives_from=GSCOCT00024261001;Name=Cc01_g11340;Ontology_term=CC_evidence_code:ISS,GO:0004842,GO:0005524,GO:0016567,GO:0019787,GO:0043687,GO:0051246,CC_EC_number:6.3.2.19,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:SYP71,CC_gene:SYP72,CC_gene:ube2c;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024261001~ Hypothetical protein~ SYP71~ missing_functional_completeness;original_location=complement(join(2988129..2988228%2C2987966..2988028%2C2986878..2986924%2C2986726..2986770%2C2986357..2986494));owner=coffea | |
| 15002 chr1 manual_curation exon 30017472 30017609 . - . Parent=GSCOCT00024261001 | |
| 15003 chr1 manual_curation exon 30017841 30017885 . - . Parent=GSCOCT00024261001 | |
| 15004 chr1 manual_curation exon 30017993 30018039 . - . Parent=GSCOCT00024261001 | |
| 15005 chr1 manual_curation exon 30019081 30019143 . - . Parent=GSCOCT00024261001 | |
| 15006 chr1 manual_curation exon 30019244 30019343 . - . Parent=GSCOCT00024261001 | |
| 15007 chr1 manual_curation CDS 30017472 30017609 . - 0 Parent=GSCOCT00024261001 | |
| 15008 chr1 manual_curation CDS 30017841 30017885 . - 0 Parent=GSCOCT00024261001 | |
| 15009 chr1 manual_curation CDS 30017993 30018039 . - 1 Parent=GSCOCT00024261001 | |
| 15010 chr1 manual_curation CDS 30019081 30019143 . - 1 Parent=GSCOCT00024261001 | |
| 15011 chr1 manual_curation CDS 30019244 30019343 . - 0 Parent=GSCOCT00024261001 | |
| 15012 chr1 manual_curation gene 30023485 30025180 . + . ID=GSCOCG00024263001;Name=Cc01_g11350 | |
| 15013 chr1 manual_curation mRNA 30023485 30025180 . + . ID=GSCOCT00024263001;Parent=GSCOCG00024263001;Name=Cc01_g11350 | |
| 15014 chr1 manual_curation polypeptide 30023538 30024903 . + . ID=GSCOCP00024263001;Dbxref=InterPro:IPR003441,PFAM:PF02365,PROFILE:PS51005,SUPERFAMILY:SSF101941,SwissProt:O49255,SwissProt:Q52QH4,SwissProt:Q93VY3,TAIR:AT1G61110.1,TAIR:AT1G69490.1,TAIR:AT1G77450.1,TrEMBL:B9SK58,TrEMBL:F6GTZ4,TrEMBL:Q2HSW8;Derives_from=GSCOCT00024263001;Name=Cc01_g11350;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative NAC domain-containing protein 72,CC_functional_completeness:complete,CC_gene:NAC68,CC_gene:NAC029,CC_gene:NAC072;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024263001~ Putative NAC domain-containing protein 72~ NAC68~ complete;original_location=join(2992423..2992594%2C2992702..2992985%2C2993315..2993788);owner=coffea | |
| 15015 chr1 manual_curation exon 30023485 30023709 . + . Parent=GSCOCT00024263001 | |
| 15016 chr1 manual_curation exon 30023817 30024100 . + . Parent=GSCOCT00024263001 | |
| 15017 chr1 manual_curation exon 30024430 30025180 . + . Parent=GSCOCT00024263001 | |
| 15018 chr1 manual_curation CDS 30023538 30023709 . + 0 Parent=GSCOCT00024263001 | |
| 15019 chr1 manual_curation CDS 30023817 30024100 . + 1 Parent=GSCOCT00024263001 | |
| 15020 chr1 manual_curation CDS 30024430 30024903 . + 0 Parent=GSCOCT00024263001 | |
| 15021 chr1 manual_curation gene 30026573 30028372 . - . ID=GSCOCG00024264001;Name=Cc01_g11360 | |
| 15022 chr1 manual_curation mRNA 30026573 30028372 . - . ID=GSCOCT00024264001;Parent=GSCOCG00024264001;Name=Cc01_g11360 | |
| 15023 chr1 manual_curation polypeptide 30026573 30028372 . - . ID=GSCOCP00024264001;Dbxref=InterPro:IPR000727,PFAM:PF05739,PROFILE:PS50192,SwissProt:Q94KK5,SwissProt:Q94KK6,SwissProt:Q9SF29,TAIR:AT3G09740.1,TAIR:AT3G45280.1,TAIR:AT3G61450.2,TrEMBL:B9S0N2,TrEMBL:B9SK57,TrEMBL:D7SKW3;Derives_from=GSCOCT00024264001;Name=Cc01_g11360;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Syntaxin-71,CC_functional_completeness:complete,CC_gene:SYP71,CC_gene:SYP72,CC_gene:SYP73;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024264001~ Syntaxin-71~ SYP71~ complete;original_location=complement(join(2997102..2997257%2C2996887..2997012%2C2996306..2996465%2C2996113..2996202%2C2995923..2995984%2C2995792..2995836%2C2995623..2995685%2C2995458..2995538));owner=coffea | |
| 15024 chr1 manual_curation exon 30026573 30026653 . - . Parent=GSCOCT00024264001 | |
| 15025 chr1 manual_curation exon 30026738 30026800 . - . Parent=GSCOCT00024264001 | |
| 15026 chr1 manual_curation exon 30026907 30026951 . - . Parent=GSCOCT00024264001 | |
| 15027 chr1 manual_curation exon 30027038 30027099 . - . Parent=GSCOCT00024264001 | |
| 15028 chr1 manual_curation exon 30027228 30027317 . - . Parent=GSCOCT00024264001 | |
| 15029 chr1 manual_curation exon 30027421 30027580 . - . Parent=GSCOCT00024264001 | |
| 15030 chr1 manual_curation exon 30028002 30028127 . - . Parent=GSCOCT00024264001 | |
| 15031 chr1 manual_curation exon 30028217 30028372 . - . Parent=GSCOCT00024264001 | |
| 15032 chr1 manual_curation CDS 30026573 30026653 . - 0 Parent=GSCOCT00024264001 | |
| 15033 chr1 manual_curation CDS 30026738 30026800 . - 0 Parent=GSCOCT00024264001 | |
| 15034 chr1 manual_curation CDS 30026907 30026951 . - 0 Parent=GSCOCT00024264001 | |
| 15035 chr1 manual_curation CDS 30027038 30027099 . - 1 Parent=GSCOCT00024264001 | |
| 15036 chr1 manual_curation CDS 30027228 30027317 . - 1 Parent=GSCOCT00024264001 | |
| 15037 chr1 manual_curation CDS 30027421 30027580 . - 0 Parent=GSCOCT00024264001 | |
| 15038 chr1 manual_curation CDS 30028002 30028127 . - 0 Parent=GSCOCT00024264001 | |
| 15039 chr1 manual_curation CDS 30028217 30028372 . - 0 Parent=GSCOCT00024264001 | |
| 15040 chr1 manual_curation gene 30029145 30032821 . - . ID=GSCOCG00024265001;Name=Cc01_g11370 | |
| 15041 chr1 manual_curation mRNA 30029145 30032821 . - . ID=GSCOCT00024265001;Parent=GSCOCG00024265001;Name=Cc01_g11370 | |
| 15042 chr1 manual_curation polypeptide 30029381 30032518 . - . ID=GSCOCP00024265001;Dbxref=GENE3D:G3DSA:3.10.110.10,InterPro:IPR000608,InterPro:IPR015582,InterPro:IPR016135,PANTHER:PTHR11621:SF26,PFAM:PF00179,PROFILE:PS50127,PROSITE:PS00183,SMART:SM00212,SUPERFAMILY:SSF54495,SwissProt:Q54XS6,SwissProt:Q8L7T3,SwissProt:Q9LJZ5,TAIR:AT1G50490.1,TAIR:AT2G16740.1,TAIR:AT3G20060.1,TrEMBL:A5AE59,TrEMBL:I1LD22,TrEMBL:I1NHE9;Derives_from=GSCOCT00024265001;Name=Cc01_g11370;Ontology_term=CC_evidence_code:ISS,GO:0004842,GO:0005524,GO:0016567,GO:0019787,GO:0043687,GO:0051246,CC_EC_number:6.3.2.19,PRODUCT:Ubiquitin-conjugating enzyme E2 19,CC_functional_completeness:complete,CC_gene:UBC19,CC_gene:ube2c,CC_gene:UBC20;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024265001~ Ubiquitin-conjugating enzyme E2 19~ UBC19~ complete;original_location=complement(join(3001270..3001403%2C3001072..3001099%2C2999900..3000130%2C2999189..2999252%2C2999024..2999083%2C2998266..2998321));owner=coffea | |
| 15043 chr1 manual_curation exon 30029145 30029436 . - . Parent=GSCOCT00024265001 | |
| 15044 chr1 manual_curation exon 30030139 30030198 . - . Parent=GSCOCT00024265001 | |
| 15045 chr1 manual_curation exon 30030304 30030367 . - . Parent=GSCOCT00024265001 | |
| 15046 chr1 manual_curation exon 30031015 30031245 . - . Parent=GSCOCT00024265001 | |
| 15047 chr1 manual_curation exon 30032187 30032214 . - . Parent=GSCOCT00024265001 | |
| 15048 chr1 manual_curation exon 30032385 30032821 . - . Parent=GSCOCT00024265001 | |
| 15049 chr1 manual_curation CDS 30029381 30029436 . - 1 Parent=GSCOCT00024265001 | |
| 15050 chr1 manual_curation CDS 30030139 30030198 . - 1 Parent=GSCOCT00024265001 | |
| 15051 chr1 manual_curation CDS 30030304 30030367 . - 0 Parent=GSCOCT00024265001 | |
| 15052 chr1 manual_curation CDS 30031015 30031245 . - 0 Parent=GSCOCT00024265001 | |
| 15053 chr1 manual_curation CDS 30032187 30032214 . - 2 Parent=GSCOCT00024265001 | |
| 15054 chr1 manual_curation CDS 30032385 30032518 . - 0 Parent=GSCOCT00024265001 | |
| 15055 chr1 manual_curation gene 30045700 30051164 . - . ID=GSCOCG00024267001;Name=Cc01_g11380 | |
| 15056 chr1 manual_curation mRNA 30045700 30051164 . - . ID=GSCOCT00024267001;Parent=GSCOCG00024267001;Name=Cc01_g11380 | |
| 15057 chr1 manual_curation polypeptide 30045700 30051164 . - . ID=GSCOCP00024267001;Dbxref=InterPro:IPR004326,PFAM:PF03094,SwissProt:O80961,SwissProt:Q94KB7,SwissProt:Q9SXB6,TAIR:AT1G11310.1,TAIR:AT1G61560.1,TAIR:AT2G39200.1,TrEMBL:B9HQB2,TrEMBL:B9SK53,TrEMBL:D7SKW2;Derives_from=GSCOCT00024267001;Name=Cc01_g11380;Ontology_term=CC_evidence_code:ISS,GO:0008219,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:MLO-like protein 6,CC_functional_completeness:complete,CC_gene:MLO6,CC_gene:MLO12,CC_gene:MLO2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024267001~ MLO-like protein 6~ MLO6~ complete;original_location=complement(join(3019927..3020049%2C3019757..3019814%2C3019411..3019649%2C3018655..3018771%2C3018487..3018547%2C3018135..3018223%2C3017121..3017195%2C3016883..3016977%2C3016663..3016712%2C3016413..3016453%2C3015965..3016138%2C3015805..3015840%2C3015613..3015680%2C3015466..3015526%2C3014585..3015067));owner=coffea | |
| 15058 chr1 manual_curation exon 30045700 30046182 . - . Parent=GSCOCT00024267001 | |
| 15059 chr1 manual_curation exon 30046581 30046641 . - . Parent=GSCOCT00024267001 | |
| 15060 chr1 manual_curation exon 30046728 30046795 . - . Parent=GSCOCT00024267001 | |
| 15061 chr1 manual_curation exon 30046920 30046955 . - . Parent=GSCOCT00024267001 | |
| 15062 chr1 manual_curation exon 30047080 30047253 . - . Parent=GSCOCT00024267001 | |
| 15063 chr1 manual_curation exon 30047528 30047568 . - . Parent=GSCOCT00024267001 | |
| 15064 chr1 manual_curation exon 30047778 30047827 . - . Parent=GSCOCT00024267001 | |
| 15065 chr1 manual_curation exon 30047998 30048092 . - . Parent=GSCOCT00024267001 | |
| 15066 chr1 manual_curation exon 30048236 30048310 . - . Parent=GSCOCT00024267001 | |
| 15067 chr1 manual_curation exon 30049250 30049338 . - . Parent=GSCOCT00024267001 | |
| 15068 chr1 manual_curation exon 30049602 30049662 . - . Parent=GSCOCT00024267001 | |
| 15069 chr1 manual_curation exon 30049770 30049886 . - . Parent=GSCOCT00024267001 | |
| 15070 chr1 manual_curation exon 30050526 30050764 . - . Parent=GSCOCT00024267001 | |
| 15071 chr1 manual_curation exon 30050872 30050929 . - . Parent=GSCOCT00024267001 | |
| 15072 chr1 manual_curation exon 30051042 30051164 . - . Parent=GSCOCT00024267001 | |
| 15073 chr1 manual_curation CDS 30045700 30046182 . - 0 Parent=GSCOCT00024267001 | |
| 15074 chr1 manual_curation CDS 30046581 30046641 . - 2 Parent=GSCOCT00024267001 | |
| 15075 chr1 manual_curation CDS 30046728 30046795 . - 0 Parent=GSCOCT00024267001 | |
| 15076 chr1 manual_curation CDS 30046920 30046955 . - 0 Parent=GSCOCT00024267001 | |
| 15077 chr1 manual_curation CDS 30047080 30047253 . - 0 Parent=GSCOCT00024267001 | |
| 15078 chr1 manual_curation CDS 30047528 30047568 . - 1 Parent=GSCOCT00024267001 | |
| 15079 chr1 manual_curation CDS 30047778 30047827 . - 2 Parent=GSCOCT00024267001 | |
| 15080 chr1 manual_curation CDS 30047998 30048092 . - 0 Parent=GSCOCT00024267001 | |
| 15081 chr1 manual_curation CDS 30048236 30048310 . - 0 Parent=GSCOCT00024267001 | |
| 15082 chr1 manual_curation CDS 30049250 30049338 . - 1 Parent=GSCOCT00024267001 | |
| 15083 chr1 manual_curation CDS 30049602 30049662 . - 0 Parent=GSCOCT00024267001 | |
| 15084 chr1 manual_curation CDS 30049770 30049886 . - 0 Parent=GSCOCT00024267001 | |
| 15085 chr1 manual_curation CDS 30050526 30050764 . - 1 Parent=GSCOCT00024267001 | |
| 15086 chr1 manual_curation CDS 30050872 30050929 . - 0 Parent=GSCOCT00024267001 | |
| 15087 chr1 manual_curation CDS 30051042 30051164 . - 0 Parent=GSCOCT00024267001 | |
| 15088 chr1 manual_curation gene 30069220 30070859 . + . ID=GSCOCG00024268001;Name=Cc01_g11390 | |
| 15089 chr1 manual_curation mRNA 30069220 30070859 . + . ID=GSCOCT00024268001;Parent=GSCOCG00024268001;Name=Cc01_g11390 | |
| 15090 chr1 manual_curation polypeptide 30069327 30070554 . + . ID=GSCOCP00024268001;Dbxref=TAIR:AT5G62550.1,TrEMBL:B9IGL7,TrEMBL:F6GTZ3,TrEMBL:G7JPH3;Derives_from=GSCOCT00024268001;Name=Cc01_g11390;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024268001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=join(3038212..3038242%2C3038342..3038426%2C3038492..3038975%2C3039194..3039439);owner=coffea | |
| 15091 chr1 manual_curation exon 30069220 30069357 . + . Parent=GSCOCT00024268001 | |
| 15092 chr1 manual_curation exon 30069457 30069541 . + . Parent=GSCOCT00024268001 | |
| 15093 chr1 manual_curation exon 30069607 30070090 . + . Parent=GSCOCT00024268001 | |
| 15094 chr1 manual_curation exon 30070309 30070859 . + . Parent=GSCOCT00024268001 | |
| 15095 chr1 manual_curation CDS 30069327 30069357 . + 0 Parent=GSCOCT00024268001 | |
| 15096 chr1 manual_curation CDS 30069457 30069541 . + 1 Parent=GSCOCT00024268001 | |
| 15097 chr1 manual_curation CDS 30069607 30070090 . + 2 Parent=GSCOCT00024268001 | |
| 15098 chr1 manual_curation CDS 30070309 30070554 . + 0 Parent=GSCOCT00024268001 | |
| 15099 chr1 manual_curation gene 30074771 30080139 . + . ID=GSCOCG00024269001;Name=Cc01_g11400 | |
| 15100 chr1 manual_curation mRNA 30074771 30080139 . + . ID=GSCOCT00024269001;Parent=GSCOCG00024269001;Name=Cc01_g11400 | |
| 15101 chr1 manual_curation polypeptide 30074998 30079966 . + . ID=GSCOCP00024269001;Dbxref=InterPro:IPR004326,PFAM:PF03094,SwissProt:O80961,SwissProt:Q94KB7,SwissProt:Q94KB9,TAIR:AT1G61560.1,TAIR:AT2G39200.1,TAIR:AT3G45290.1,TrEMBL:B9MTA4,TrEMBL:B9N791,TrEMBL:D7TQI8;Derives_from=GSCOCT00024269001;Name=Cc01_g11400;Ontology_term=CC_evidence_code:ISS,GO:0008219,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:MLO-like protein 3,CC_functional_completeness:complete,CC_gene:MLO3,CC_gene:MLO12,CC_gene:MLO6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024269001~ MLO-like protein 3~ MLO3~ complete;original_location=join(3043883..3044011%2C3044130..3044187%2C3044330..3044598%2C3044757..3044873%2C3045751..3045811%2C3046008..3046096%2C3046194..3046268%2C3046586..3046674%2C3047190..3047239%2C3047420..3047460%2C3047669..3047842%2C3047950..3047985%2C3048083..3048150%2C3048287..3048347%2C3048465..3048851);owner=coffea | |
| 15102 chr1 manual_curation exon 30074771 30075126 . + . Parent=GSCOCT00024269001 | |
| 15103 chr1 manual_curation exon 30075245 30075302 . + . Parent=GSCOCT00024269001 | |
| 15104 chr1 manual_curation exon 30075445 30075713 . + . Parent=GSCOCT00024269001 | |
| 15105 chr1 manual_curation exon 30075872 30075988 . + . Parent=GSCOCT00024269001 | |
| 15106 chr1 manual_curation exon 30076866 30076926 . + . Parent=GSCOCT00024269001 | |
| 15107 chr1 manual_curation exon 30077123 30077211 . + . Parent=GSCOCT00024269001 | |
| 15108 chr1 manual_curation exon 30077309 30077383 . + . Parent=GSCOCT00024269001 | |
| 15109 chr1 manual_curation exon 30077701 30077789 . + . Parent=GSCOCT00024269001 | |
| 15110 chr1 manual_curation exon 30078305 30078354 . + . Parent=GSCOCT00024269001 | |
| 15111 chr1 manual_curation exon 30078535 30078575 . + . Parent=GSCOCT00024269001 | |
| 15112 chr1 manual_curation exon 30078784 30078957 . + . Parent=GSCOCT00024269001 | |
| 15113 chr1 manual_curation exon 30079065 30079100 . + . Parent=GSCOCT00024269001 | |
| 15114 chr1 manual_curation exon 30079198 30079265 . + . Parent=GSCOCT00024269001 | |
| 15115 chr1 manual_curation exon 30079402 30079462 . + . Parent=GSCOCT00024269001 | |
| 15116 chr1 manual_curation exon 30079580 30080139 . + . Parent=GSCOCT00024269001 | |
| 15117 chr1 manual_curation CDS 30074998 30075126 . + 0 Parent=GSCOCT00024269001 | |
| 15118 chr1 manual_curation CDS 30075245 30075302 . + 0 Parent=GSCOCT00024269001 | |
| 15119 chr1 manual_curation CDS 30075445 30075713 . + 1 Parent=GSCOCT00024269001 | |
| 15120 chr1 manual_curation CDS 30075872 30075988 . + 0 Parent=GSCOCT00024269001 | |
| 15121 chr1 manual_curation CDS 30076866 30076926 . + 0 Parent=GSCOCT00024269001 | |
| 15122 chr1 manual_curation CDS 30077123 30077211 . + 1 Parent=GSCOCT00024269001 | |
| 15123 chr1 manual_curation CDS 30077309 30077383 . + 0 Parent=GSCOCT00024269001 | |
| 15124 chr1 manual_curation CDS 30077701 30077789 . + 0 Parent=GSCOCT00024269001 | |
| 15125 chr1 manual_curation CDS 30078305 30078354 . + 2 Parent=GSCOCT00024269001 | |
| 15126 chr1 manual_curation CDS 30078535 30078575 . + 1 Parent=GSCOCT00024269001 | |
| 15127 chr1 manual_curation CDS 30078784 30078957 . + 0 Parent=GSCOCT00024269001 | |
| 15128 chr1 manual_curation CDS 30079065 30079100 . + 0 Parent=GSCOCT00024269001 | |
| 15129 chr1 manual_curation CDS 30079198 30079265 . + 0 Parent=GSCOCT00024269001 | |
| 15130 chr1 manual_curation CDS 30079402 30079462 . + 2 Parent=GSCOCT00024269001 | |
| 15131 chr1 manual_curation CDS 30079580 30079966 . + 0 Parent=GSCOCT00024269001 | |
| 15132 chr1 manual_curation gene 30092326 30099880 . + . ID=GSCOCG00024270001;Name=Cc01_g11410 | |
| 15133 chr1 manual_curation mRNA 30092326 30099880 . + . ID=GSCOCT00024270001;Parent=GSCOCG00024270001;Name=Cc01_g11410 | |
| 15134 chr1 manual_curation polypeptide 30092857 30099529 . + . ID=GSCOCP00024270001;Dbxref=InterPro:IPR003311,InterPro:IPR003340,InterPro:IPR010525,InterPro:IPR011525,PFAM:PF02309,PFAM:PF02362,PFAM:PF06507,PROFILE:PS50863,PROFILE:PS50962,SwissProt:Q2QQX6,SwissProt:Q8S985,SwissProt:Q9ZTX9,TAIR:AT2G33860.1,TAIR:AT5G60450.1,TAIR:AT5G62000.1,TrEMBL:C9E9N5,TrEMBL:D7SKV9,TrEMBL:Q2LAI9;Derives_from=GSCOCT00024270001;Name=Cc01_g11410;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0005634,GO:0009725,GO:0045449,GO:0046983,CC_EC_number:missing_EC_number,PRODUCT:Auxin response factor 4,CC_functional_completeness:complete,CC_gene:ARF4,CC_gene:ARF24,CC_gene:ARF15;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024270001~ Auxin response factor 4~ ARF4~ complete;original_location=join(3061742..3062122%2C3062286..3062342%2C3062512..3062682%2C3062793..3062877%2C3062964..3063054%2C3063749..3063913%2C3065779..3065898%2C3065987..3066062%2C3066454..3066709%2C3066801..3067549%2C3067675..3067865%2C3068261..3068414);owner=coffea | |
| 15135 chr1 manual_curation exon 30092326 30093237 . + . Parent=GSCOCT00024270001 | |
| 15136 chr1 manual_curation exon 30093401 30093457 . + . Parent=GSCOCT00024270001 | |
| 15137 chr1 manual_curation exon 30093627 30093797 . + . Parent=GSCOCT00024270001 | |
| 15138 chr1 manual_curation exon 30093908 30093992 . + . Parent=GSCOCT00024270001 | |
| 15139 chr1 manual_curation exon 30094079 30094169 . + . Parent=GSCOCT00024270001 | |
| 15140 chr1 manual_curation exon 30094864 30095028 . + . Parent=GSCOCT00024270001 | |
| 15141 chr1 manual_curation exon 30096894 30097013 . + . Parent=GSCOCT00024270001 | |
| 15142 chr1 manual_curation exon 30097102 30097177 . + . Parent=GSCOCT00024270001 | |
| 15143 chr1 manual_curation exon 30097569 30097824 . + . Parent=GSCOCT00024270001 | |
| 15144 chr1 manual_curation exon 30097916 30098664 . + . Parent=GSCOCT00024270001 | |
| 15145 chr1 manual_curation exon 30098790 30098980 . + . Parent=GSCOCT00024270001 | |
| 15146 chr1 manual_curation exon 30099376 30099880 . + . Parent=GSCOCT00024270001 | |
| 15147 chr1 manual_curation CDS 30092857 30093237 . + 0 Parent=GSCOCT00024270001 | |
| 15148 chr1 manual_curation CDS 30093401 30093457 . + 0 Parent=GSCOCT00024270001 | |
| 15149 chr1 manual_curation CDS 30093627 30093797 . + 0 Parent=GSCOCT00024270001 | |
| 15150 chr1 manual_curation CDS 30093908 30093992 . + 0 Parent=GSCOCT00024270001 | |
| 15151 chr1 manual_curation CDS 30094079 30094169 . + 1 Parent=GSCOCT00024270001 | |
| 15152 chr1 manual_curation CDS 30094864 30095028 . + 2 Parent=GSCOCT00024270001 | |
| 15153 chr1 manual_curation CDS 30096894 30097013 . + 2 Parent=GSCOCT00024270001 | |
| 15154 chr1 manual_curation CDS 30097102 30097177 . + 2 Parent=GSCOCT00024270001 | |
| 15155 chr1 manual_curation CDS 30097569 30097824 . + 0 Parent=GSCOCT00024270001 | |
| 15156 chr1 manual_curation CDS 30097916 30098664 . + 1 Parent=GSCOCT00024270001 | |
| 15157 chr1 manual_curation CDS 30098790 30098980 . + 0 Parent=GSCOCT00024270001 | |
| 15158 chr1 manual_curation CDS 30099376 30099529 . + 2 Parent=GSCOCT00024270001 | |
| 15159 chr1 manual_curation gene 30100044 30109140 . - . ID=GSCOCG00024271001;Name=Cc01_g11420 | |
| 15160 chr1 manual_curation mRNA 30100044 30109140 . - . ID=GSCOCT00024271001;Parent=GSCOCG00024271001;Name=Cc01_g11420 | |
| 15161 chr1 manual_curation polypeptide 30100427 30109056 . - . ID=GSCOCP00024271001;Dbxref=GENE3D:G3DSA:1.10.540.10,GENE3D:G3DSA:1.20.140.10,GENE3D:G3DSA:2.40.110.10,InterPro:IPR006089,InterPro:IPR006090,InterPro:IPR006091,InterPro:IPR006092,InterPro:IPR009075,InterPro:IPR009100,InterPro:IPR013764,InterPro:IPR013786,PFAM:PF00441,PFAM:PF02770,PFAM:PF02771,PROSITE:PS00072,PROSITE:PS00073,SUPERFAMILY:SSF47203,SUPERFAMILY:SSF56645,SwissProt:Q9FS87,SwissProt:Q9FS88,SwissProt:Q9SWG0,TAIR:AT3G06810.1,TAIR:AT3G45300.1,TAIR:AT3G51840.1,TrEMBL:B9SK49,TrEMBL:D7SKV8,TrEMBL:Q0MX57;Derives_from=GSCOCT00024271001;Name=Cc01_g11420;Ontology_term=CC_evidence_code:ISS,GO:0003995,GO:0008152,GO:0016491,GO:0050660,GO:0055114,CC_EC_number:1.3.99.10,CC_EC_number:1.3.99.10,PRODUCT:Isovaleryl-CoA dehydrogenase 1%2C mitochondrial,CC_functional_completeness:complete,CC_gene:IVD1,CC_gene:IVD2,CC_gene:IVD;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024271001~ Isovaleryl-CoA dehydrogenase 1%2C mitochondrial~ IVD1~ complete;original_location=complement(join(3077840..3077941%2C3076799..3076882%2C3076662..3076719%2C3075761..3075885%2C3075630..3075674%2C3073558..3073606%2C3073360..3073469%2C3072274..3072350%2C3071287..3071337%2C3071128..3071192%2C3070272..3070426%2C3070091..3070131%2C3069965..3070019%2C3069793..3069849%2C3069312..3069455));owner=coffea | |
| 15162 chr1 manual_curation exon 30100044 30100570 . - . Parent=GSCOCT00024271001 | |
| 15163 chr1 manual_curation exon 30100908 30100964 . - . Parent=GSCOCT00024271001 | |
| 15164 chr1 manual_curation exon 30101080 30101134 . - . Parent=GSCOCT00024271001 | |
| 15165 chr1 manual_curation exon 30101206 30101246 . - . Parent=GSCOCT00024271001 | |
| 15166 chr1 manual_curation exon 30101387 30101541 . - . Parent=GSCOCT00024271001 | |
| 15167 chr1 manual_curation exon 30102243 30102307 . - . Parent=GSCOCT00024271001 | |
| 15168 chr1 manual_curation exon 30102402 30102452 . - . Parent=GSCOCT00024271001 | |
| 15169 chr1 manual_curation exon 30103389 30103465 . - . Parent=GSCOCT00024271001 | |
| 15170 chr1 manual_curation exon 30104475 30104584 . - . Parent=GSCOCT00024271001 | |
| 15171 chr1 manual_curation exon 30104673 30104721 . - . Parent=GSCOCT00024271001 | |
| 15172 chr1 manual_curation exon 30106745 30106789 . - . Parent=GSCOCT00024271001 | |
| 15173 chr1 manual_curation exon 30106876 30107000 . - . Parent=GSCOCT00024271001 | |
| 15174 chr1 manual_curation exon 30107777 30107834 . - . Parent=GSCOCT00024271001 | |
| 15175 chr1 manual_curation exon 30107914 30107997 . - . Parent=GSCOCT00024271001 | |
| 15176 chr1 manual_curation exon 30108955 30109140 . - . Parent=GSCOCT00024271001 | |
| 15177 chr1 manual_curation CDS 30100427 30100570 . - 0 Parent=GSCOCT00024271001 | |
| 15178 chr1 manual_curation CDS 30100908 30100964 . - 0 Parent=GSCOCT00024271001 | |
| 15179 chr1 manual_curation CDS 30101080 30101134 . - 2 Parent=GSCOCT00024271001 | |
| 15180 chr1 manual_curation CDS 30101206 30101246 . - 0 Parent=GSCOCT00024271001 | |
| 15181 chr1 manual_curation CDS 30101387 30101541 . - 1 Parent=GSCOCT00024271001 | |
| 15182 chr1 manual_curation CDS 30102243 30102307 . - 2 Parent=GSCOCT00024271001 | |
| 15183 chr1 manual_curation CDS 30102402 30102452 . - 2 Parent=GSCOCT00024271001 | |
| 15184 chr1 manual_curation CDS 30103389 30103465 . - 0 Parent=GSCOCT00024271001 | |
| 15185 chr1 manual_curation CDS 30104475 30104584 . - 1 Parent=GSCOCT00024271001 | |
| 15186 chr1 manual_curation CDS 30104673 30104721 . - 0 Parent=GSCOCT00024271001 | |
| 15187 chr1 manual_curation CDS 30106745 30106789 . - 0 Parent=GSCOCT00024271001 | |
| 15188 chr1 manual_curation CDS 30106876 30107000 . - 1 Parent=GSCOCT00024271001 | |
| 15189 chr1 manual_curation CDS 30107777 30107834 . - 0 Parent=GSCOCT00024271001 | |
| 15190 chr1 manual_curation CDS 30107914 30107997 . - 0 Parent=GSCOCT00024271001 | |
| 15191 chr1 manual_curation CDS 30108955 30109056 . - 0 Parent=GSCOCT00024271001 | |
| 15192 chr1 manual_curation gene 30113044 30117788 . + . ID=GSCOCG00024273001;Name=Cc01_g11430 | |
| 15193 chr1 manual_curation mRNA 30113044 30117788 . + . ID=GSCOCT00024273001;Parent=GSCOCG00024273001;Name=Cc01_g11430 | |
| 15194 chr1 manual_curation polypeptide 30113239 30117424 . + . ID=GSCOCP00024273001;Dbxref=InterPro:IPR019176,PFAM:PF09786,TAIR:AT1G07970.1,TrEMBL:A5BKG3,TrEMBL:B9SK48,TrEMBL:D7SKV7;Derives_from=GSCOCT00024273001;Name=Cc01_g11430;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:CONTAINS InterPro DOMAIN/s,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024273001~ CONTAINS InterPro DOMAIN/s: Cytochrome B561-related%2C N-terminal (InterPro:IPR019176)%3B Has 215 Blast hits to 213 proteins in 79 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 131%3B Fungi - 22%3B Plants - 42%3B Viruses - 0%3B Other Eukaryotes - 14 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(3082124..3082299%2C3082763..3082818%2C3082915..3083822%2C3084220..3084418%2C3084528..3084713%2C3084837..3085217%2C3086179..3086309);owner=coffea | |
| 15195 chr1 manual_curation exon 30113044 30113414 . + . Parent=GSCOCT00024273001 | |
| 15196 chr1 manual_curation exon 30113878 30113933 . + . Parent=GSCOCT00024273001 | |
| 15197 chr1 manual_curation exon 30114030 30114937 . + . Parent=GSCOCT00024273001 | |
| 15198 chr1 manual_curation exon 30115335 30115533 . + . Parent=GSCOCT00024273001 | |
| 15199 chr1 manual_curation exon 30115643 30115828 . + . Parent=GSCOCT00024273001 | |
| 15200 chr1 manual_curation exon 30115952 30116332 . + . Parent=GSCOCT00024273001 | |
| 15201 chr1 manual_curation exon 30117294 30117788 . + . Parent=GSCOCT00024273001 | |
| 15202 chr1 manual_curation CDS 30113239 30113414 . + 0 Parent=GSCOCT00024273001 | |
| 15203 chr1 manual_curation CDS 30113878 30113933 . + 2 Parent=GSCOCT00024273001 | |
| 15204 chr1 manual_curation CDS 30114030 30114937 . + 1 Parent=GSCOCT00024273001 | |
| 15205 chr1 manual_curation CDS 30115335 30115533 . + 0 Parent=GSCOCT00024273001 | |
| 15206 chr1 manual_curation CDS 30115643 30115828 . + 1 Parent=GSCOCT00024273001 | |
| 15207 chr1 manual_curation CDS 30115952 30116332 . + 1 Parent=GSCOCT00024273001 | |
| 15208 chr1 manual_curation CDS 30117294 30117424 . + 1 Parent=GSCOCT00024273001 | |
| 15209 chr1 manual_curation gene 30119194 30132446 . - . ID=GSCOCG00024274001;Name=Cc01_g11440 | |
| 15210 chr1 manual_curation mRNA 30119194 30132446 . - . ID=GSCOCT00024274001;Parent=GSCOCG00024274001;Name=Cc01_g11440 | |
| 15211 chr1 manual_curation polypeptide 30120214 30132010 . - . ID=GSCOCP00024274001;Dbxref=InterPro:IPR001965,InterPro:IPR003034,InterPro:IPR004181,InterPro:IPR011011,InterPro:IPR019786,InterPro:IPR019787,PFAM:PF00628,PFAM:PF02037,PFAM:PF02891,PROFILE:PS50800,PROFILE:PS51044,PROSITE:PS01359,SMART:SM00249,SMART:SM00513,SUPERFAMILY:SSF57903,SwissProt:Q680Q4,SwissProt:Q6ASW7,SwissProt:Q6L4L4,TAIR:AT5G60410.2,TrEMBL:B9SK46,TrEMBL:F6GTZ0,TrEMBL:G7JQG1;Derives_from=GSCOCT00024274001;Name=Cc01_g11440;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:E3 SUMO-protein ligase SIZ1,CC_functional_completeness:complete,CC_gene:SIZ1,CC_gene:SIZ2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024274001~ E3 SUMO-protein ligase SIZ1~ SIZ1~ complete;original_location=complement(join(3100872..3100895%2C3099873..3099953%2C3098940..3098982%2C3098193..3098265%2C3097807..3097966%2C3097212..3097345%2C3096562..3096630%2C3095915..3096002%2C3095726..3095801%2C3095211..3095284%2C3094827..3094934%2C3094542..3094703%2C3091411..3091515%2C3091241..3091321%2C3089947..3091153%2C3089099..3089238));owner=coffea | |
| 15212 chr1 manual_curation exon 30132258 30132446 . - . Parent=GSCOCT00024274001 | |
| 15213 chr1 manual_curation exon 30119194 30120353 . - . Parent=GSCOCT00024274001 | |
| 15214 chr1 manual_curation exon 30121062 30122268 . - . Parent=GSCOCT00024274001 | |
| 15215 chr1 manual_curation exon 30122356 30122436 . - . Parent=GSCOCT00024274001 | |
| 15216 chr1 manual_curation exon 30122526 30122630 . - . Parent=GSCOCT00024274001 | |
| 15217 chr1 manual_curation exon 30125657 30125818 . - . Parent=GSCOCT00024274001 | |
| 15218 chr1 manual_curation exon 30125942 30126049 . - . Parent=GSCOCT00024274001 | |
| 15219 chr1 manual_curation exon 30126326 30126399 . - . Parent=GSCOCT00024274001 | |
| 15220 chr1 manual_curation exon 30126841 30126916 . - . Parent=GSCOCT00024274001 | |
| 15221 chr1 manual_curation exon 30127030 30127117 . - . Parent=GSCOCT00024274001 | |
| 15222 chr1 manual_curation exon 30127677 30127745 . - . Parent=GSCOCT00024274001 | |
| 15223 chr1 manual_curation exon 30128327 30128460 . - . Parent=GSCOCT00024274001 | |
| 15224 chr1 manual_curation exon 30128922 30129081 . - . Parent=GSCOCT00024274001 | |
| 15225 chr1 manual_curation exon 30129308 30129380 . - . Parent=GSCOCT00024274001 | |
| 15226 chr1 manual_curation exon 30130055 30130097 . - . Parent=GSCOCT00024274001 | |
| 15227 chr1 manual_curation exon 30130988 30131068 . - . Parent=GSCOCT00024274001 | |
| 15228 chr1 manual_curation exon 30131987 30132145 . - . Parent=GSCOCT00024274001 | |
| 15229 chr1 manual_curation CDS 30120214 30120353 . - 1 Parent=GSCOCT00024274001 | |
| 15230 chr1 manual_curation CDS 30121062 30122268 . - 0 Parent=GSCOCT00024274001 | |
| 15231 chr1 manual_curation CDS 30122356 30122436 . - 0 Parent=GSCOCT00024274001 | |
| 15232 chr1 manual_curation CDS 30122526 30122630 . - 0 Parent=GSCOCT00024274001 | |
| 15233 chr1 manual_curation CDS 30125657 30125818 . - 0 Parent=GSCOCT00024274001 | |
| 15234 chr1 manual_curation CDS 30125942 30126049 . - 0 Parent=GSCOCT00024274001 | |
| 15235 chr1 manual_curation CDS 30126326 30126399 . - 1 Parent=GSCOCT00024274001 | |
| 15236 chr1 manual_curation CDS 30126841 30126916 . - 0 Parent=GSCOCT00024274001 | |
| 15237 chr1 manual_curation CDS 30127030 30127117 . - 2 Parent=GSCOCT00024274001 | |
| 15238 chr1 manual_curation CDS 30127677 30127745 . - 2 Parent=GSCOCT00024274001 | |
| 15239 chr1 manual_curation CDS 30128327 30128460 . - 0 Parent=GSCOCT00024274001 | |
| 15240 chr1 manual_curation CDS 30128922 30129081 . - 2 Parent=GSCOCT00024274001 | |
| 15241 chr1 manual_curation CDS 30129308 30129380 . - 1 Parent=GSCOCT00024274001 | |
| 15242 chr1 manual_curation CDS 30130055 30130097 . - 0 Parent=GSCOCT00024274001 | |
| 15243 chr1 manual_curation CDS 30130988 30131068 . - 0 Parent=GSCOCT00024274001 | |
| 15244 chr1 manual_curation CDS 30131987 30132010 . - 0 Parent=GSCOCT00024274001 | |
| 15245 chr1 manual_curation gene 30143732 30147565 . + . ID=GSCOCG00024275001;Name=Cc01_g11450 | |
| 15246 chr1 manual_curation mRNA 30143732 30147565 . + . ID=GSCOCT00024275001;Parent=GSCOCG00024275001;Name=Cc01_g11450 | |
| 15247 chr1 manual_curation polypeptide 30144057 30147216 . + . ID=GSCOCP00024275001;Dbxref=InterPro:IPR001353,InterPro:IPR016050,InterPro:IPR016295,PFAM:PF00227,PIR:PIRSF001213,PROSITE:PS00854,SwissProt:P99026,SwissProt:Q3T108,SwissProt:Q7DLR9,TAIR:AT1G56450.1,TrEMBL:D7SKV3,TrEMBL:I1JRK8,TrEMBL:I1NC65;Derives_from=GSCOCT00024275001;Name=Cc01_g11450;Ontology_term=CC_evidence_code:ISS,GO:0004175,GO:0004298,GO:0005839,GO:0051603,CC_EC_number:3.4.25.1,PRODUCT:Proteasome subunit beta type-4,CC_functional_completeness:complete,CC_gene:PBG1,CC_gene:Psmb4,CC_gene:PSMB4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024275001~ Proteasome subunit beta type-4~ PBG1~ complete;original_location=join(3112942..3113015%2C3113299..3113375%2C3113921..3114050%2C3114236..3114284%2C3114330..3114395%2C3114496..3114685%2C3115992..3116101);owner=coffea | |
| 15248 chr1 manual_curation exon 30143732 30143965 . + . Parent=GSCOCT00024275001 | |
| 15249 chr1 manual_curation exon 30144057 30144130 . + . Parent=GSCOCT00024275001 | |
| 15250 chr1 manual_curation exon 30144414 30144490 . + . Parent=GSCOCT00024275001 | |
| 15251 chr1 manual_curation exon 30145036 30145165 . + . Parent=GSCOCT00024275001 | |
| 15252 chr1 manual_curation exon 30145351 30145399 . + . Parent=GSCOCT00024275001 | |
| 15253 chr1 manual_curation exon 30145445 30145510 . + . Parent=GSCOCT00024275001 | |
| 15254 chr1 manual_curation exon 30145611 30145800 . + . Parent=GSCOCT00024275001 | |
| 15255 chr1 manual_curation exon 30147107 30147565 . + . Parent=GSCOCT00024275001 | |
| 15256 chr1 manual_curation CDS 30144057 30144130 . + 0 Parent=GSCOCT00024275001 | |
| 15257 chr1 manual_curation CDS 30144414 30144490 . + 2 Parent=GSCOCT00024275001 | |
| 15258 chr1 manual_curation CDS 30145036 30145165 . + 1 Parent=GSCOCT00024275001 | |
| 15259 chr1 manual_curation CDS 30145351 30145399 . + 2 Parent=GSCOCT00024275001 | |
| 15260 chr1 manual_curation CDS 30145445 30145510 . + 0 Parent=GSCOCT00024275001 | |
| 15261 chr1 manual_curation CDS 30145611 30145800 . + 0 Parent=GSCOCT00024275001 | |
| 15262 chr1 manual_curation CDS 30147107 30147216 . + 1 Parent=GSCOCT00024275001 | |
| 15263 chr1 manual_curation gene 30155109 30156489 . - . ID=GSCOCG00024276001;Name=Cc01_g11460 | |
| 15264 chr1 manual_curation mRNA 30155109 30156489 . - . ID=GSCOCT00024276001;Parent=GSCOCG00024276001;Name=Cc01_g11460 | |
| 15265 chr1 manual_curation polypeptide 30155325 30155638 . - . ID=GSCOCP00024276001;Derives_from=GSCOCT00024276001;Name=Cc01_g11460;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024276001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(3124420..3124523%2C3124210..3124294));owner=coffea | |
| 15266 chr1 manual_curation exon 30155944 30156489 . - . Parent=GSCOCT00024276001 | |
| 15267 chr1 manual_curation exon 30155109 30155409 . - . Parent=GSCOCT00024276001 | |
| 15268 chr1 manual_curation exon 30155535 30155846 . - . Parent=GSCOCT00024276001 | |
| 15269 chr1 manual_curation CDS 30155325 30155409 . - 2 Parent=GSCOCT00024276001 | |
| 15270 chr1 manual_curation CDS 30155535 30155638 . - 0 Parent=GSCOCT00024276001 | |
| 15271 chr1 manual_curation gene 30162305 30163165 . + . ID=GSCOCG00024277001;Name=Cc01_g11470 | |
| 15272 chr1 manual_curation mRNA 30162305 30163165 . + . ID=GSCOCT00024277001;Parent=GSCOCG00024277001;Name=Cc01_g11470 | |
| 15273 chr1 manual_curation polypeptide 30162518 30163005 . + . ID=GSCOCP00024277001;Derives_from=GSCOCT00024277001;Name=Cc01_g11470;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024277001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(3131403..3131488%2C3131629..3131890);owner=coffea | |
| 15274 chr1 manual_curation exon 30162305 30162603 . + . Parent=GSCOCT00024277001 | |
| 15275 chr1 manual_curation exon 30162744 30163165 . + . Parent=GSCOCT00024277001 | |
| 15276 chr1 manual_curation CDS 30162518 30162603 . + 0 Parent=GSCOCT00024277001 | |
| 15277 chr1 manual_curation CDS 30162744 30163005 . + 2 Parent=GSCOCT00024277001 | |
| 15278 chr1 manual_curation gene 30168787 30171861 . + . ID=GSCOCG00024278001;Name=Cc01_g11480 | |
| 15279 chr1 manual_curation mRNA 30168787 30171861 . + . ID=GSCOCT00024278001;Parent=GSCOCG00024278001;Name=Cc01_g11480 | |
| 15280 chr1 manual_curation polypeptide 30169984 30171619 . + . ID=GSCOCP00024278001;Dbxref=InterPro:IPR000795,InterPro:IPR004160,InterPro:IPR004161,InterPro:IPR004539,InterPro:IPR009000,PFAM:PF00009,PFAM:PF03143,PFAM:PF03144,PRINTS:PR00315,PROSITE:PS00301,SUPERFAMILY:SSF50447,SwissProt:O49169,SwissProt:O64937,SwissProt:P17786,TAIR:AT1G07930.1,TAIR:AT1G07940.1,TAIR:AT5G60390.1,TIGRFAMs:TIGR00483,TrEMBL:A8MSE8,TrEMBL:B9SPV9,TrEMBL:C4JA47;Derives_from=GSCOCT00024278001;Name=Cc01_g11480;Ontology_term=CC_evidence_code:ISS,GO:0003746,GO:0003924,GO:0005525,GO:0005737,GO:0006414,CC_EC_number:2.7.7.4,PRODUCT:Elongation factor 1-alpha,CC_functional_completeness:complete,CC_gene:EF1,CC_gene:REFA1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024278001~ Elongation factor 1-alpha~ EF1~ complete;original_location=join(3138869..3139330%2C3139419..3139728%2C3139786..3139868%2C3139950..3140095%2C3140145..3140309%2C3140429..3140504);owner=coffea | |
| 15281 chr1 manual_curation exon 30168787 30170445 . + . Parent=GSCOCT00024278001 | |
| 15282 chr1 manual_curation exon 30170534 30170843 . + . Parent=GSCOCT00024278001 | |
| 15283 chr1 manual_curation exon 30170901 30170983 . + . Parent=GSCOCT00024278001 | |
| 15284 chr1 manual_curation exon 30171065 30171210 . + . Parent=GSCOCT00024278001 | |
| 15285 chr1 manual_curation exon 30171260 30171424 . + . Parent=GSCOCT00024278001 | |
| 15286 chr1 manual_curation exon 30171544 30171861 . + . Parent=GSCOCT00024278001 | |
| 15287 chr1 manual_curation CDS 30169984 30170445 . + 0 Parent=GSCOCT00024278001 | |
| 15288 chr1 manual_curation CDS 30170534 30170843 . + 0 Parent=GSCOCT00024278001 | |
| 15289 chr1 manual_curation CDS 30170901 30170983 . + 1 Parent=GSCOCT00024278001 | |
| 15290 chr1 manual_curation CDS 30171065 30171210 . + 0 Parent=GSCOCT00024278001 | |
| 15291 chr1 manual_curation CDS 30171260 30171424 . + 2 Parent=GSCOCT00024278001 | |
| 15292 chr1 manual_curation CDS 30171544 30171619 . + 2 Parent=GSCOCT00024278001 | |
| 15293 chr1 manual_curation gene 30172653 30176851 . - . ID=GSCOCG00024279001;Name=Cc01_g11490 | |
| 15294 chr1 manual_curation mRNA 30172653 30176851 . - . ID=GSCOCT00024279001;Parent=GSCOCG00024279001;Name=Cc01_g11490 | |
| 15295 chr1 manual_curation polypeptide 30173157 30176662 . - . ID=GSCOCP00024279001;Dbxref=GENE3D:G3DSA:3.40.30.10,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR013766,InterPro:IPR017936,PFAM:PF00085,PROFILE:PS51352,SUPERFAMILY:SSF52833,SwissProt:Q10N04,SwissProt:Q8GYD1,SwissProt:Q91W90,TAIR:AT1G04980.1,TAIR:AT1G07960.2,TAIR:AT2G47470.1,TrEMBL:C5WNK6,TrEMBL:D7KHX4,TrEMBL:D7SKU5;Derives_from=GSCOCT00024279001;Name=Cc01_g11490;Ontology_term=CC_evidence_code:ISS,GO:0045454,CC_EC_number:5.3.4.1,PRODUCT:Protein disulfide-isomerase 5-1,CC_functional_completeness:complete,CC_gene:PDIL5-1,CC_gene:Txndc5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024279001~ Protein disulfide-isomerase 5-1~ PDIL5-1~ complete;original_location=complement(join(3145431..3145547%2C3144560..3144618%2C3144289..3144464%2C3142042..3142136));owner=coffea | |
| 15296 chr1 manual_curation exon 30172653 30173251 . - . Parent=GSCOCT00024279001 | |
| 15297 chr1 manual_curation exon 30175404 30175579 . - . Parent=GSCOCT00024279001 | |
| 15298 chr1 manual_curation exon 30175675 30175733 . - . Parent=GSCOCT00024279001 | |
| 15299 chr1 manual_curation exon 30176546 30176851 . - . Parent=GSCOCT00024279001 | |
| 15300 chr1 manual_curation CDS 30173157 30173251 . - 1 Parent=GSCOCT00024279001 | |
| 15301 chr1 manual_curation CDS 30175404 30175579 . - 2 Parent=GSCOCT00024279001 | |
| 15302 chr1 manual_curation CDS 30175675 30175733 . - 0 Parent=GSCOCT00024279001 | |
| 15303 chr1 manual_curation CDS 30176546 30176662 . - 0 Parent=GSCOCT00024279001 | |
| 15304 chr1 manual_curation gene 30186356 30186607 . - . ID=GSCOCG00003313001;Name=Cc01_g11500 | |
| 15305 chr1 manual_curation mRNA 30186356 30186607 . - . ID=GSCOCT00003313001;Parent=GSCOCG00003313001;Name=Cc01_g11500 | |
| 15306 chr1 manual_curation polypeptide 30186356 30186607 . - . ID=GSCOCP00003313001;Derives_from=GSCOCT00003313001;Name=Cc01_g11500;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00003313001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1947..1999%2C1748..1850));owner=coffea | |
| 15307 chr1 manual_curation exon 30186356 30186458 . - . Parent=GSCOCT00003313001 | |
| 15308 chr1 manual_curation exon 30186555 30186607 . - . Parent=GSCOCT00003313001 | |
| 15309 chr1 manual_curation CDS 30186356 30186458 . - 2 Parent=GSCOCT00003313001 | |
| 15310 chr1 manual_curation CDS 30186555 30186607 . - 0 Parent=GSCOCT00003313001 | |
| 15311 chr1 manual_curation gene 30188439 30191236 . + . ID=GSCOCG00028053001;Name=Cc01_g11510 | |
| 15312 chr1 manual_curation mRNA 30188439 30191236 . + . ID=GSCOCT00028053001;Parent=GSCOCG00028053001;Name=Cc01_g11510 | |
| 15313 chr1 manual_curation polypeptide 30189601 30191236 . + . ID=GSCOCP00028053001;Dbxref=InterPro:IPR000795,InterPro:IPR004160,InterPro:IPR004161,InterPro:IPR004539,InterPro:IPR009000,PFAM:PF00009,PFAM:PF03143,PFAM:PF03144,PRINTS:PR00315,PROSITE:PS00301,SUPERFAMILY:SSF50447,SwissProt:Q0WL56,SwissProt:Q8GTY0,SwissProt:Q8W4H7,TAIR:AT1G07930.1,TAIR:AT1G07940.1,TAIR:AT5G60390.1,TIGRFAMs:TIGR00483,TrEMBL:A8MSE8;Derives_from=GSCOCT00028053001;Name=Cc01_g11510;Ontology_term=CC_evidence_code:ISS,GO:0003746,GO:0003924,GO:0005525,GO:0005737,GO:0006414,CC_EC_number:2.7.7.4,PRODUCT:Elongation factor 1-alpha 4,CC_functional_completeness:complete,CC_gene:EF1,CC_gene:REFA1,CC_gene:EF1A,CC_gene:A4,CC_gene:A3,CC_gene:A2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028053001~ Elongation factor 1-alpha 4~ EF1~ complete;original_location=join(2062..2523%2C2612..3061%2C3143..3288%2C3338..3502%2C3622..3697);owner=coffea | |
| 15314 chr1 manual_curation exon 30188439 30188762 . + . Parent=GSCOCT00028053001 | |
| 15315 chr1 manual_curation exon 30189577 30190062 . + . Parent=GSCOCT00028053001 | |
| 15316 chr1 manual_curation exon 30190151 30190600 . + . Parent=GSCOCT00028053001 | |
| 15317 chr1 manual_curation exon 30190682 30190827 . + . Parent=GSCOCT00028053001 | |
| 15318 chr1 manual_curation exon 30190877 30191041 . + . Parent=GSCOCT00028053001 | |
| 15319 chr1 manual_curation exon 30191161 30191236 . + . Parent=GSCOCT00028053001 | |
| 15320 chr1 manual_curation CDS 30189601 30190062 . + 0 Parent=GSCOCT00028053001 | |
| 15321 chr1 manual_curation CDS 30190151 30190600 . + 0 Parent=GSCOCT00028053001 | |
| 15322 chr1 manual_curation CDS 30190682 30190827 . + 0 Parent=GSCOCT00028053001 | |
| 15323 chr1 manual_curation CDS 30190877 30191041 . + 2 Parent=GSCOCT00028053001 | |
| 15324 chr1 manual_curation CDS 30191161 30191236 . + 2 Parent=GSCOCT00028053001 | |
| 15325 chr1 manual_curation gene 30192228 30194751 . - . ID=GSCOCG00028054001;Name=Cc01_g11520 | |
| 15326 chr1 manual_curation mRNA 30192228 30194751 . - . ID=GSCOCT00028054001;Parent=GSCOCG00028054001;Name=Cc01_g11520 | |
| 15327 chr1 manual_curation polypeptide 30192393 30194575 . - . ID=GSCOCP00028054001;Dbxref=GENE3D:G3DSA:2.60.120.10,InterPro:IPR006045,InterPro:IPR011051,InterPro:IPR014710,PFAM:PF00190,SMART:SM00835,SUPERFAMILY:SSF51182,SwissProt:Q9SPL3,SwissProt:Q9SPL4,SwissProt:Q9SPL5,TAIR:AT2G18540.1,TAIR:AT2G28490.1,TAIR:AT4G36700.1,TrEMBL:A1E0W1,TrEMBL:B9HNV4,TrEMBL:Q6L3H2;Derives_from=GSCOCT00028054001;Name=Cc01_g11520;Ontology_term=CC_evidence_code:ISS,GO:0045735,CC_EC_number:missing_EC_number,PRODUCT:Putative Vicilin-like antimicrobial peptides 2-2,CC_functional_completeness:fragment,CC_gene:AMP2-2,CC_gene:AMP2-3,CC_gene:AMP2-1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028054001~ Putative Vicilin-like antimicrobial peptides 2-2~ AMP2-2~ fragment;original_location=complement(join(6685..7036%2C6091..6284%2C5924..6004%2C5453..5848%2C4854..5336));owner=coffea | |
| 15328 chr1 manual_curation exon 30192228 30192875 . - . Parent=GSCOCT00028054001 | |
| 15329 chr1 manual_curation exon 30192992 30193387 . - . Parent=GSCOCT00028054001 | |
| 15330 chr1 manual_curation exon 30193463 30193543 . - . Parent=GSCOCT00028054001 | |
| 15331 chr1 manual_curation exon 30193630 30193823 . - . Parent=GSCOCT00028054001 | |
| 15332 chr1 manual_curation exon 30194224 30194751 . - . Parent=GSCOCT00028054001 | |
| 15333 chr1 manual_curation CDS 30192393 30192875 . - 0 Parent=GSCOCT00028054001 | |
| 15334 chr1 manual_curation CDS 30192992 30193387 . - 0 Parent=GSCOCT00028054001 | |
| 15335 chr1 manual_curation CDS 30193463 30193543 . - 0 Parent=GSCOCT00028054001 | |
| 15336 chr1 manual_curation CDS 30193630 30193823 . - 1 Parent=GSCOCT00028054001 | |
| 15337 chr1 manual_curation CDS 30194224 30194575 . - 0 Parent=GSCOCT00028054001 | |
| 15338 chr1 manual_curation gene 30196828 30200760 . + . ID=GSCOCG00028055001;Name=Cc01_g11530 | |
| 15339 chr1 manual_curation mRNA 30196828 30200760 . + . ID=GSCOCT00028055001;Parent=GSCOCG00028055001;Name=Cc01_g11530 | |
| 15340 chr1 manual_curation polypeptide 30197007 30200376 . + . ID=GSCOCP00028055001;Dbxref=InterPro:IPR019190,PFAM:PF09810,SwissProt:A2VDX7,SwissProt:Q9CXP9,SwissProt:Q9H790,TAIR:AT5G60370.1,TrEMBL:A5AJU2,TrEMBL:F6GTY4,TrEMBL:I1LKD2;Derives_from=GSCOCT00028055001;Name=Cc01_g11530;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable CDSuclease V,CC_functional_completeness:modules,CC_gene:DEM1,CC_gene:Dem1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028055001~ Putative Probable CDSuclease V~ DEM1~ modules;original_location=join(9468..9872%2C10358..10462%2C10755..10876%2C11091..11240%2C11398..11551%2C11917..11993%2C12627..12837);owner=coffea | |
| 15341 chr1 manual_curation exon 30196828 30197411 . + . Parent=GSCOCT00028055001 | |
| 15342 chr1 manual_curation exon 30197897 30198001 . + . Parent=GSCOCT00028055001 | |
| 15343 chr1 manual_curation exon 30198294 30198415 . + . Parent=GSCOCT00028055001 | |
| 15344 chr1 manual_curation exon 30198630 30198779 . + . Parent=GSCOCT00028055001 | |
| 15345 chr1 manual_curation exon 30198937 30199090 . + . Parent=GSCOCT00028055001 | |
| 15346 chr1 manual_curation exon 30199456 30199532 . + . Parent=GSCOCT00028055001 | |
| 15347 chr1 manual_curation exon 30200166 30200760 . + . Parent=GSCOCT00028055001 | |
| 15348 chr1 manual_curation CDS 30197007 30197411 . + 0 Parent=GSCOCT00028055001 | |
| 15349 chr1 manual_curation CDS 30197897 30198001 . + 0 Parent=GSCOCT00028055001 | |
| 15350 chr1 manual_curation CDS 30198294 30198415 . + 0 Parent=GSCOCT00028055001 | |
| 15351 chr1 manual_curation CDS 30198630 30198779 . + 2 Parent=GSCOCT00028055001 | |
| 15352 chr1 manual_curation CDS 30198937 30199090 . + 2 Parent=GSCOCT00028055001 | |
| 15353 chr1 manual_curation CDS 30199456 30199532 . + 0 Parent=GSCOCT00028055001 | |
| 15354 chr1 manual_curation CDS 30200166 30200376 . + 2 Parent=GSCOCT00028055001 | |
| 15355 chr1 manual_curation gene 30201347 30205609 . + . ID=GSCOCG00028056001;Name=Cc01_g11540 | |
| 15356 chr1 manual_curation mRNA 30201347 30205609 . + . ID=GSCOCT00028056001;Parent=GSCOCG00028056001;Name=Cc01_g11540 | |
| 15357 chr1 manual_curation polypeptide 30201805 30204452 . + . ID=GSCOCP00028056001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q0WVK7,SwissProt:Q9LSF5,SwissProt:Q9ZUY1,TAIR:AT2G27800.1,TAIR:AT3G25210.1,TAIR:AT5G27300.1,TIGRFAMs:TIGR00756,TrEMBL:B9IM01,TrEMBL:F6GTY7,TrEMBL:I1LQZ1;Derives_from=GSCOCT00028056001;Name=Cc01_g11540;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:At2g27800,CC_gene:At3g25210,CC_gene:At1g05670;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028056001~ Hypothetical protein~ At2g27800~ missing_functional_completeness;original_location=join(14266..14788%2C14864..15497%2C15560..15596%2C16031..16164%2C16895..16913);owner=coffea | |
| 15358 chr1 manual_curation exon 30201347 30202327 . + . Parent=GSCOCT00028056001 | |
| 15359 chr1 manual_curation exon 30202403 30203036 . + . Parent=GSCOCT00028056001 | |
| 15360 chr1 manual_curation exon 30203099 30203135 . + . Parent=GSCOCT00028056001 | |
| 15361 chr1 manual_curation exon 30203570 30203703 . + . Parent=GSCOCT00028056001 | |
| 15362 chr1 manual_curation exon 30204434 30205609 . + . Parent=GSCOCT00028056001 | |
| 15363 chr1 manual_curation CDS 30201805 30202327 . + 0 Parent=GSCOCT00028056001 | |
| 15364 chr1 manual_curation CDS 30202403 30203036 . + 1 Parent=GSCOCT00028056001 | |
| 15365 chr1 manual_curation CDS 30203099 30203135 . + 2 Parent=GSCOCT00028056001 | |
| 15366 chr1 manual_curation CDS 30203570 30203703 . + 0 Parent=GSCOCT00028056001 | |
| 15367 chr1 manual_curation CDS 30204434 30204452 . + 2 Parent=GSCOCT00028056001 | |
| 15368 chr1 manual_curation gene 30205781 30223489 . - . ID=GSCOCG00028057001;Name=Cc01_g11550 | |
| 15369 chr1 manual_curation mRNA 30205781 30223489 . - . ID=GSCOCT00028057001;Parent=GSCOCG00028057001;Name=Cc01_g11550 | |
| 15370 chr1 manual_curation polypeptide 30205781 30223175 . - . ID=GSCOCP00028057001;Dbxref=TAIR:AT1G07910.1,TrEMBL:D7M6C7,TrEMBL:D7SKU0,TrEMBL:Q0WL81;Derives_from=GSCOCT00028057001;Name=Cc01_g11550;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:RNAligase,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028057001~ RNAligase~ unknown_gene~ complete;original_location=complement(join(35442..35636%2C34023..34502%2C33795..33845%2C33569..33651%2C32744..32843%2C31709..31787%2C30822..30945%2C30142..30248%2C28652..28780%2C27467..27531%2C27195..27359%2C26577..26737%2C26422..26453%2C25836..26008%2C24611..24690%2C24437..24502%2C24069..24349%2C23455..23562%2C22689..22786%2C22243..22303%2C21141..21217%2C20969..21040%2C20814..20890%2C20034..20114%2C19831..19933%2C19299..19457%2C18242..18634));owner=coffea | |
| 15371 chr1 manual_curation exon 30205781 30206173 . - . Parent=GSCOCT00028057001 | |
| 15372 chr1 manual_curation exon 30206838 30206996 . - . Parent=GSCOCT00028057001 | |
| 15373 chr1 manual_curation exon 30207370 30207472 . - . Parent=GSCOCT00028057001 | |
| 15374 chr1 manual_curation exon 30207573 30207653 . - . Parent=GSCOCT00028057001 | |
| 15375 chr1 manual_curation exon 30208353 30208429 . - . Parent=GSCOCT00028057001 | |
| 15376 chr1 manual_curation exon 30208508 30208579 . - . Parent=GSCOCT00028057001 | |
| 15377 chr1 manual_curation exon 30208680 30208756 . - . Parent=GSCOCT00028057001 | |
| 15378 chr1 manual_curation exon 30209782 30209842 . - . Parent=GSCOCT00028057001 | |
| 15379 chr1 manual_curation exon 30210228 30210325 . - . Parent=GSCOCT00028057001 | |
| 15380 chr1 manual_curation exon 30210994 30211101 . - . Parent=GSCOCT00028057001 | |
| 15381 chr1 manual_curation exon 30211608 30211888 . - . Parent=GSCOCT00028057001 | |
| 15382 chr1 manual_curation exon 30211976 30212041 . - . Parent=GSCOCT00028057001 | |
| 15383 chr1 manual_curation exon 30212150 30212229 . - . Parent=GSCOCT00028057001 | |
| 15384 chr1 manual_curation exon 30213375 30213547 . - . Parent=GSCOCT00028057001 | |
| 15385 chr1 manual_curation exon 30213961 30213992 . - . Parent=GSCOCT00028057001 | |
| 15386 chr1 manual_curation exon 30214116 30214276 . - . Parent=GSCOCT00028057001 | |
| 15387 chr1 manual_curation exon 30214734 30214898 . - . Parent=GSCOCT00028057001 | |
| 15388 chr1 manual_curation exon 30215006 30215070 . - . Parent=GSCOCT00028057001 | |
| 15389 chr1 manual_curation exon 30216191 30216319 . - . Parent=GSCOCT00028057001 | |
| 15390 chr1 manual_curation exon 30217681 30217787 . - . Parent=GSCOCT00028057001 | |
| 15391 chr1 manual_curation exon 30218361 30218484 . - . Parent=GSCOCT00028057001 | |
| 15392 chr1 manual_curation exon 30219248 30219326 . - . Parent=GSCOCT00028057001 | |
| 15393 chr1 manual_curation exon 30220283 30220382 . - . Parent=GSCOCT00028057001 | |
| 15394 chr1 manual_curation exon 30221108 30221190 . - . Parent=GSCOCT00028057001 | |
| 15395 chr1 manual_curation exon 30221334 30221384 . - . Parent=GSCOCT00028057001 | |
| 15396 chr1 manual_curation exon 30221562 30222041 . - . Parent=GSCOCT00028057001 | |
| 15397 chr1 manual_curation exon 30222981 30223489 . - . Parent=GSCOCT00028057001 | |
| 15398 chr1 manual_curation CDS 30205781 30206173 . - 0 Parent=GSCOCT00028057001 | |
| 15399 chr1 manual_curation CDS 30206838 30206996 . - 0 Parent=GSCOCT00028057001 | |
| 15400 chr1 manual_curation CDS 30207370 30207472 . - 2 Parent=GSCOCT00028057001 | |
| 15401 chr1 manual_curation CDS 30207573 30207653 . - 2 Parent=GSCOCT00028057001 | |
| 15402 chr1 manual_curation CDS 30208353 30208429 . - 0 Parent=GSCOCT00028057001 | |
| 15403 chr1 manual_curation CDS 30208508 30208579 . - 0 Parent=GSCOCT00028057001 | |
| 15404 chr1 manual_curation CDS 30208680 30208756 . - 1 Parent=GSCOCT00028057001 | |
| 15405 chr1 manual_curation CDS 30209782 30209842 . - 0 Parent=GSCOCT00028057001 | |
| 15406 chr1 manual_curation CDS 30210228 30210325 . - 1 Parent=GSCOCT00028057001 | |
| 15407 chr1 manual_curation CDS 30210994 30211101 . - 1 Parent=GSCOCT00028057001 | |
| 15408 chr1 manual_curation CDS 30211608 30211888 . - 2 Parent=GSCOCT00028057001 | |
| 15409 chr1 manual_curation CDS 30211976 30212041 . - 2 Parent=GSCOCT00028057001 | |
| 15410 chr1 manual_curation CDS 30212150 30212229 . - 0 Parent=GSCOCT00028057001 | |
| 15411 chr1 manual_curation CDS 30213375 30213547 . - 1 Parent=GSCOCT00028057001 | |
| 15412 chr1 manual_curation CDS 30213961 30213992 . - 2 Parent=GSCOCT00028057001 | |
| 15413 chr1 manual_curation CDS 30214116 30214276 . - 0 Parent=GSCOCT00028057001 | |
| 15414 chr1 manual_curation CDS 30214734 30214898 . - 0 Parent=GSCOCT00028057001 | |
| 15415 chr1 manual_curation CDS 30215006 30215070 . - 1 Parent=GSCOCT00028057001 | |
| 15416 chr1 manual_curation CDS 30216191 30216319 . - 1 Parent=GSCOCT00028057001 | |
| 15417 chr1 manual_curation CDS 30217681 30217787 . - 2 Parent=GSCOCT00028057001 | |
| 15418 chr1 manual_curation CDS 30218361 30218484 . - 1 Parent=GSCOCT00028057001 | |
| 15419 chr1 manual_curation CDS 30219248 30219326 . - 0 Parent=GSCOCT00028057001 | |
| 15420 chr1 manual_curation CDS 30220283 30220382 . - 2 Parent=GSCOCT00028057001 | |
| 15421 chr1 manual_curation CDS 30221108 30221190 . - 0 Parent=GSCOCT00028057001 | |
| 15422 chr1 manual_curation CDS 30221334 30221384 . - 0 Parent=GSCOCT00028057001 | |
| 15423 chr1 manual_curation CDS 30221562 30222041 . - 0 Parent=GSCOCT00028057001 | |
| 15424 chr1 manual_curation CDS 30222981 30223175 . - 0 Parent=GSCOCT00028057001 | |
| 15425 chr1 manual_curation gene 30223973 30228739 . - . ID=GSCOCG00028058001;Name=Cc01_g11560 | |
| 15426 chr1 manual_curation mRNA 30223973 30228739 . - . ID=GSCOCT00028058001;Parent=GSCOCG00028058001;Name=Cc01_g11560 | |
| 15427 chr1 manual_curation polypeptide 30224489 30228340 . - . ID=GSCOCP00028058001;Dbxref=InterPro:IPR000073,PFAM:PF00561,TAIR:AT3G09690.1,TAIR:AT5G02970.1,TAIR:AT5G22460.1,TrEMBL:F6GTY2,TrEMBL:G7JRG3,TrEMBL:Q6L459;Derives_from=GSCOCT00028058001;Name=Cc01_g11560;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:alpha/beta-Hydrolases superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028058001~ alpha/beta-Hydrolases superfamily protein~ unknown_gene~ complete;original_location=complement(join(40417..40801%2C39523..39714%2C39174..39413%2C38265..38482%2C37758..38012%2C36950..37276));owner=coffea | |
| 15428 chr1 manual_curation exon 30223973 30224815 . - . Parent=GSCOCT00028058001 | |
| 15429 chr1 manual_curation exon 30225297 30225551 . - . Parent=GSCOCT00028058001 | |
| 15430 chr1 manual_curation exon 30225804 30226021 . - . Parent=GSCOCT00028058001 | |
| 15431 chr1 manual_curation exon 30226713 30226952 . - . Parent=GSCOCT00028058001 | |
| 15432 chr1 manual_curation exon 30227062 30227253 . - . Parent=GSCOCT00028058001 | |
| 15433 chr1 manual_curation exon 30227956 30228739 . - . Parent=GSCOCT00028058001 | |
| 15434 chr1 manual_curation CDS 30224489 30224815 . - 0 Parent=GSCOCT00028058001 | |
| 15435 chr1 manual_curation CDS 30225297 30225551 . - 0 Parent=GSCOCT00028058001 | |
| 15436 chr1 manual_curation CDS 30225804 30226021 . - 1 Parent=GSCOCT00028058001 | |
| 15437 chr1 manual_curation CDS 30226713 30226952 . - 1 Parent=GSCOCT00028058001 | |
| 15438 chr1 manual_curation CDS 30227062 30227253 . - 1 Parent=GSCOCT00028058001 | |
| 15439 chr1 manual_curation CDS 30227956 30228340 . - 0 Parent=GSCOCT00028058001 | |
| 15440 chr1 manual_curation gene 30230990 30234112 . - . ID=GSCOCG00028060001;Name=Cc01_g11570 | |
| 15441 chr1 manual_curation mRNA 30230990 30234112 . - . ID=GSCOCT00028060001;Parent=GSCOCG00028060001;Name=Cc01_g11570 | |
| 15442 chr1 manual_curation polypeptide 30231123 30233958 . - . ID=GSCOCP00028060001;Dbxref=InterPro:IPR008689,PFAM:PF05873,SwissProt:Q9FT52,TAIR:AT3G52300.1,TrEMBL:B9SK23,TrEMBL:B9SUN3,TrEMBL:Q6L460;Derives_from=GSCOCT00028060001;Name=Cc01_g11570;Ontology_term=CC_evidence_code:ISS,GO:0015078,GO:0015986,CC_EC_number:missing_EC_number,PRODUCT:ATP synthase subunit d%2C mitochondrial,CC_functional_completeness:complete,CC_gene:At3g52300;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028060001~ ATP synthase subunit d%2C mitochondrial~ At3g52300~ complete;original_location=complement(join(46249..46419%2C44777..44858%2C44053..44117%2C43826..43912%2C43584..43685));owner=coffea | |
| 15443 chr1 manual_curation exon 30230990 30231224 . - . Parent=GSCOCT00028060001 | |
| 15444 chr1 manual_curation exon 30231365 30231451 . - . Parent=GSCOCT00028060001 | |
| 15445 chr1 manual_curation exon 30231592 30231656 . - . Parent=GSCOCT00028060001 | |
| 15446 chr1 manual_curation exon 30232316 30232397 . - . Parent=GSCOCT00028060001 | |
| 15447 chr1 manual_curation exon 30233788 30234112 . - . Parent=GSCOCT00028060001 | |
| 15448 chr1 manual_curation CDS 30231123 30231224 . - 0 Parent=GSCOCT00028060001 | |
| 15449 chr1 manual_curation CDS 30231365 30231451 . - 0 Parent=GSCOCT00028060001 | |
| 15450 chr1 manual_curation CDS 30231592 30231656 . - 1 Parent=GSCOCT00028060001 | |
| 15451 chr1 manual_curation CDS 30232316 30232397 . - 0 Parent=GSCOCT00028060001 | |
| 15452 chr1 manual_curation CDS 30233788 30233958 . - 0 Parent=GSCOCT00028060001 | |
| 15453 chr1 manual_curation gene 30235799 30239880 . - . ID=GSCOCG00028061001;Name=Cc01_g11580 | |
| 15454 chr1 manual_curation mRNA 30235799 30239880 . - . ID=GSCOCT00028061001;Parent=GSCOCG00028061001;Name=Cc01_g11580 | |
| 15455 chr1 manual_curation polypeptide 30236969 30239733 . - . ID=GSCOCP00028061001;Dbxref=InterPro:IPR001841,InterPro:IPR002867,PFAM:PF01485,PROFILE:PS50089,SMART:SM00647,SwissProt:A2VEA3,SwissProt:Q6T486,SwissProt:Q9Z1K5,TAIR:AT2G25370.1,TAIR:AT5G37560.1,TAIR:AT5G60250.1,TrEMBL:B9SK22,TrEMBL:G7JRG7,TrEMBL:I1LQZ5;Derives_from=GSCOCT00028061001;Name=Cc01_g11580;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative zinc finger (C3HC4-type RING finger) family protein,CC_functional_completeness:fragment,CC_gene:rbrA,CC_gene:Arih1,CC_gene:ARIH1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028061001~ Putative zinc finger (C3HC4-type RING finger) family protein~ rbrA~ fragment;original_location=complement(join(51832..52194%2C50262..51052%2C49430..49529));owner=coffea | |
| 15456 chr1 manual_curation exon 30235799 30237068 . - . Parent=GSCOCT00028061001 | |
| 15457 chr1 manual_curation exon 30237801 30238591 . - . Parent=GSCOCT00028061001 | |
| 15458 chr1 manual_curation exon 30239371 30239880 . - . Parent=GSCOCT00028061001 | |
| 15459 chr1 manual_curation CDS 30236969 30237068 . - 2 Parent=GSCOCT00028061001 | |
| 15460 chr1 manual_curation CDS 30237801 30238591 . - 0 Parent=GSCOCT00028061001 | |
| 15461 chr1 manual_curation CDS 30239371 30239733 . - 0 Parent=GSCOCT00028061001 | |
| 15462 chr1 manual_curation gene 30240416 30243744 . - . ID=GSCOCG00028062001;Name=Cc01_g11590 | |
| 15463 chr1 manual_curation mRNA 30240416 30243744 . - . ID=GSCOCT00028062001;Parent=GSCOCG00028062001;Name=Cc01_g11590 | |
| 15464 chr1 manual_curation polypeptide 30240691 30243041 . - . ID=GSCOCP00028062001;Dbxref=InterPro:IPR001841,InterPro:IPR002867,InterPro:IPR017907,InterPro:IPR018957,PFAM:PF00097,PFAM:PF01485,PROFILE:PS50089,PROSITE:PS00518,SMART:SM00647,SwissProt:P0CE10,SwissProt:Q6T486,SwissProt:Q94981,TAIR:AT2G25360.1,TAIR:AT2G25370.1,TAIR:AT5G60250.1,TrEMBL:B9SK22,TrEMBL:I1LQZ5,TrEMBL:Q6L461;Derives_from=GSCOCT00028062001;Name=Cc01_g11590;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein ariadne-1,CC_functional_completeness:fragment,CC_gene:rbrA,CC_gene:At4g01020,CC_gene:ari-1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028062001~ Putative Protein ariadne-1~ rbrA~ fragment;original_location=complement(join(55413..55502%2C53786..54558%2C53152..53335));owner=coffea | |
| 15465 chr1 manual_curation exon 30240416 30240874 . - . Parent=GSCOCT00028062001 | |
| 15466 chr1 manual_curation exon 30241325 30242097 . - . Parent=GSCOCT00028062001 | |
| 15467 chr1 manual_curation exon 30242952 30243744 . - . Parent=GSCOCT00028062001 | |
| 15468 chr1 manual_curation CDS 30240691 30240874 . - 2 Parent=GSCOCT00028062001 | |
| 15469 chr1 manual_curation CDS 30241325 30242097 . - 0 Parent=GSCOCT00028062001 | |
| 15470 chr1 manual_curation CDS 30242952 30243041 . - 0 Parent=GSCOCT00028062001 | |
| 15471 chr1 manual_curation gene 30248308 30248973 . - . ID=GSCOCG00028063001;Name=Cc01_g11600 | |
| 15472 chr1 manual_curation mRNA 30248308 30248973 . - . ID=GSCOCT00028063001;Parent=GSCOCG00028063001;Name=Cc01_g11600 | |
| 15473 chr1 manual_curation polypeptide 30248308 30248713 . - . ID=GSCOCP00028063001;Dbxref=InterPro:IPR001878,PROFILE:PS50158;Derives_from=GSCOCT00028063001;Name=Cc01_g11600;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028063001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(61090..61174%2C60769..60986));owner=coffea | |
| 15474 chr1 manual_curation exon 30248308 30248525 . - . Parent=GSCOCT00028063001 | |
| 15475 chr1 manual_curation exon 30248629 30248973 . - . Parent=GSCOCT00028063001 | |
| 15476 chr1 manual_curation CDS 30248308 30248525 . - 1 Parent=GSCOCT00028063001 | |
| 15477 chr1 manual_curation CDS 30248629 30248713 . - 0 Parent=GSCOCT00028063001 | |
| 15478 chr1 manual_curation gene 30264557 30266434 . - . ID=GSCOCG00028065001;Name=Cc01_g11610 | |
| 15479 chr1 manual_curation mRNA 30264557 30266434 . - . ID=GSCOCT00028065001;Parent=GSCOCG00028065001;Name=Cc01_g11610 | |
| 15480 chr1 manual_curation polypeptide 30264864 30266323 . - . ID=GSCOCP00028065001;Dbxref=InterPro:IPR004883,PFAM:PF03195,PROFILE:PS50891,SwissProt:Q8LBW3,SwissProt:Q9LQR0,SwissProt:Q9SK08,TAIR:AT1G07900.1,TAIR:AT2G28500.1,TAIR:AT2G30130.1,TrEMBL:G7IKN3,TrEMBL:I1LKC5,TrEMBL:Q6L463;Derives_from=GSCOCT00028065001;Name=Cc01_g11610;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:LOB domain-containing protein 11,CC_functional_completeness:fragment,CC_gene:LBD11,CC_gene:LBD1,CC_gene:LBD12;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028065001~ LOB domain-containing protein 11~ LBD11~ fragment;original_location=complement(join(78527..78784%2C77325..77687));owner=coffea | |
| 15481 chr1 manual_curation exon 30264557 30265226 . - . Parent=GSCOCT00028065001 | |
| 15482 chr1 manual_curation exon 30266066 30266434 . - . Parent=GSCOCT00028065001 | |
| 15483 chr1 manual_curation CDS 30264864 30265226 . - 0 Parent=GSCOCT00028065001 | |
| 15484 chr1 manual_curation CDS 30266066 30266323 . - 0 Parent=GSCOCT00028065001 | |
| 15485 chr1 manual_curation gene 30275804 30280191 . - . ID=GSCOCG00028066001;Name=Cc01_g11620 | |
| 15486 chr1 manual_curation mRNA 30275804 30280191 . - . ID=GSCOCT00028066001;Parent=GSCOCG00028066001;Name=Cc01_g11620 | |
| 15487 chr1 manual_curation polypeptide 30275804 30280191 . - . ID=GSCOCP00028066001;Dbxref=GENE3D:G3DSA:3.40.50.20,InterPro:IPR005480,InterPro:IPR005481,InterPro:IPR013817,InterPro:IPR016185,PFAM:PF00289,PFAM:PF02787,SUPERFAMILY:SSF48108,SUPERFAMILY:SSF52440,SwissProt:Q55756,SwissProt:Q7UJ58,SwissProt:Q8YQL2,TAIR:AT1G29900.1,TrEMBL:A5B6E2,TrEMBL:F6GTX9,TrEMBL:Q8L6J9;Derives_from=GSCOCT00028066001;Name=Cc01_g11620;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004086,GO:0005524,GO:0006807,GO:0008152,CC_EC_number:6.3.5.5,PRODUCT:Putative Carbamoyl-phosphate synthase large chain,CC_functional_completeness:fragment,CC_gene:carB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028066001~ Putative Carbamoyl-phosphate synthase large chain~ carB~ fragment;original_location=complement(join(92612..92652%2C91508..91616%2C90054..90147%2C89449..89695%2C88832..89394%2C88265..88521));owner=coffea | |
| 15488 chr1 manual_curation exon 30275804 30276060 . - . Parent=GSCOCT00028066001 | |
| 15489 chr1 manual_curation exon 30276371 30276933 . - . Parent=GSCOCT00028066001 | |
| 15490 chr1 manual_curation exon 30276988 30277234 . - . Parent=GSCOCT00028066001 | |
| 15491 chr1 manual_curation exon 30277593 30277686 . - . Parent=GSCOCT00028066001 | |
| 15492 chr1 manual_curation exon 30279047 30279155 . - . Parent=GSCOCT00028066001 | |
| 15493 chr1 manual_curation exon 30280151 30280191 . - . Parent=GSCOCT00028066001 | |
| 15494 chr1 manual_curation CDS 30275804 30276060 . - 1 Parent=GSCOCT00028066001 | |
| 15495 chr1 manual_curation CDS 30276371 30276933 . - 2 Parent=GSCOCT00028066001 | |
| 15496 chr1 manual_curation CDS 30276988 30277234 . - 1 Parent=GSCOCT00028066001 | |
| 15497 chr1 manual_curation CDS 30277593 30277686 . - 0 Parent=GSCOCT00028066001 | |
| 15498 chr1 manual_curation CDS 30279047 30279155 . - 2 Parent=GSCOCT00028066001 | |
| 15499 chr1 manual_curation CDS 30280151 30280191 . - 0 Parent=GSCOCT00028066001 | |
| 15500 chr1 manual_curation gene 30287842 30292539 . + . ID=GSCOCG00028068001;Name=Cc01_g11630 | |
| 15501 chr1 manual_curation mRNA 30287842 30292539 . + . ID=GSCOCT00028068001;Parent=GSCOCG00028068001;Name=Cc01_g11630 | |
| 15502 chr1 manual_curation polypeptide 30288527 30291925 . + . ID=GSCOCP00028068001;Dbxref=InterPro:IPR001666,PANTHER:PTHR10658,PFAM:PF02121,PRINTS:PR00391,SwissProt:P43125,SwissProt:Q9NCL7,SwissProt:Q9NCL8,TrEMBL:A5B6E1,TrEMBL:B9SK19,TrEMBL:F6GTX8;Derives_from=GSCOCT00028068001;Name=Cc01_g11630;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0006810,CC_EC_number:missing_EC_number,PRODUCT:Putative Phosphatidylinositol transfer protein 1,CC_functional_completeness:complete,CC_gene:pitA,CC_gene:pitB,CC_gene:rdgB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028068001~ Putative Phosphatidylinositol transfer protein 1~ pitA~ complete;original_location=join(100988..101008%2C101111..101259%2C101776..101867%2C102019..102026%2C102121..102192%2C102397..102564%2C102913..103008%2C104104..104226%2C104354..104386);owner=coffea | |
| 15503 chr1 manual_curation exon 30287842 30288003 . + . Parent=GSCOCT00028068001 | |
| 15504 chr1 manual_curation exon 30288489 30288547 . + . Parent=GSCOCT00028068001 | |
| 15505 chr1 manual_curation exon 30288650 30288798 . + . Parent=GSCOCT00028068001 | |
| 15506 chr1 manual_curation exon 30289315 30289406 . + . Parent=GSCOCT00028068001 | |
| 15507 chr1 manual_curation exon 30289558 30289565 . + . Parent=GSCOCT00028068001 | |
| 15508 chr1 manual_curation exon 30289660 30289731 . + . Parent=GSCOCT00028068001 | |
| 15509 chr1 manual_curation exon 30289936 30290103 . + . Parent=GSCOCT00028068001 | |
| 15510 chr1 manual_curation exon 30290452 30290547 . + . Parent=GSCOCT00028068001 | |
| 15511 chr1 manual_curation exon 30291643 30291765 . + . Parent=GSCOCT00028068001 | |
| 15512 chr1 manual_curation exon 30291893 30292539 . + . Parent=GSCOCT00028068001 | |
| 15513 chr1 manual_curation CDS 30288527 30288547 . + 0 Parent=GSCOCT00028068001 | |
| 15514 chr1 manual_curation CDS 30288650 30288798 . + 0 Parent=GSCOCT00028068001 | |
| 15515 chr1 manual_curation CDS 30289315 30289406 . + 2 Parent=GSCOCT00028068001 | |
| 15516 chr1 manual_curation CDS 30289558 30289565 . + 1 Parent=GSCOCT00028068001 | |
| 15517 chr1 manual_curation CDS 30289660 30289731 . + 0 Parent=GSCOCT00028068001 | |
| 15518 chr1 manual_curation CDS 30289936 30290103 . + 0 Parent=GSCOCT00028068001 | |
| 15519 chr1 manual_curation CDS 30290452 30290547 . + 0 Parent=GSCOCT00028068001 | |
| 15520 chr1 manual_curation CDS 30291643 30291765 . + 0 Parent=GSCOCT00028068001 | |
| 15521 chr1 manual_curation CDS 30291893 30291925 . + 0 Parent=GSCOCT00028068001 | |
| 15522 chr1 manual_curation gene 30294690 30298306 . - . ID=GSCOCG00028069001;Name=Cc01_g11640 | |
| 15523 chr1 manual_curation mRNA 30294690 30298306 . - . ID=GSCOCT00028069001;Parent=GSCOCG00028069001;Name=Cc01_g11640 | |
| 15524 chr1 manual_curation polypeptide 30295034 30298093 . - . ID=GSCOCP00028069001;Dbxref=InterPro:IPR000301,InterPro:IPR018499,InterPro:IPR018503,PFAM:PF00335,PRINTS:PR00259,PROSITE:PS00421,TAIR:AT2G23810.1,TAIR:AT3G45600.1,TAIR:AT5G60220.1,TrEMBL:D7LMP3,TrEMBL:D7MTS9,TrEMBL:F6GTX6;Derives_from=GSCOCT00028069001;Name=Cc01_g11640;Ontology_term=CC_evidence_code:ISS,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:tetraspanin3,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028069001~ tetraspanin3~ unknown_gene~ complete;original_location=complement(join(110042..110554%2C107495..107839));owner=coffea | |
| 15525 chr1 manual_curation exon 30294690 30295378 . - . Parent=GSCOCT00028069001 | |
| 15526 chr1 manual_curation exon 30297581 30298306 . - . Parent=GSCOCT00028069001 | |
| 15527 chr1 manual_curation CDS 30295034 30295378 . - 0 Parent=GSCOCT00028069001 | |
| 15528 chr1 manual_curation CDS 30297581 30298093 . - 0 Parent=GSCOCT00028069001 | |
| 15529 chr1 manual_curation gene 30308187 30314209 . + . ID=GSCOCG00028070001;Name=Cc01_g11650 | |
| 15530 chr1 manual_curation mRNA 30308187 30314209 . + . ID=GSCOCT00028070001;Parent=GSCOCG00028070001;Name=Cc01_g11650 | |
| 15531 chr1 manual_curation polypeptide 30309786 30313819 . + . ID=GSCOCP00028070001;Dbxref=SwissProt:Q8VYU8,SwissProt:Q9LSS5,SwissProt:Q9ZQC5,TAIR:AT2G37080.1,TAIR:AT3G53350.1,TAIR:AT5G60210.1,TrEMBL:A5BX17,TrEMBL:B9T1Y2,TrEMBL:F6GTX5;Derives_from=GSCOCT00028070001;Name=Cc01_g11650;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Interactor of constitutive active ROPs 3,CC_functional_completeness:complete,CC_gene:ICR3,CC_gene:ICR2,CC_gene:ICR5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028070001~ Putative Interactor of constitutive active ROPs 3~ ICR3~ complete;original_location=join(122247..122266%2C123616..123865%2C124610..126063%2C126151..126280);owner=coffea | |
| 15532 chr1 manual_curation exon 30308187 30308327 . + . Parent=GSCOCT00028070001 | |
| 15533 chr1 manual_curation exon 30309695 30309805 . + . Parent=GSCOCT00028070001 | |
| 15534 chr1 manual_curation exon 30311155 30311404 . + . Parent=GSCOCT00028070001 | |
| 15535 chr1 manual_curation exon 30312149 30313602 . + . Parent=GSCOCT00028070001 | |
| 15536 chr1 manual_curation exon 30313690 30314209 . + . Parent=GSCOCT00028070001 | |
| 15537 chr1 manual_curation CDS 30309786 30309805 . + 0 Parent=GSCOCT00028070001 | |
| 15538 chr1 manual_curation CDS 30311155 30311404 . + 2 Parent=GSCOCT00028070001 | |
| 15539 chr1 manual_curation CDS 30312149 30313602 . + 0 Parent=GSCOCT00028070001 | |
| 15540 chr1 manual_curation CDS 30313690 30313819 . + 2 Parent=GSCOCT00028070001 | |
| 15541 chr1 manual_curation gene 30314391 30316909 . + . ID=GSCOCG00028071001;Name=Cc01_g11660 | |
| 15542 chr1 manual_curation mRNA 30314391 30316909 . + . ID=GSCOCT00028071001;Parent=GSCOCG00028071001;Name=Cc01_g11660 | |
| 15543 chr1 manual_curation polypeptide 30314391 30316699 . + . ID=GSCOCP00028071001;Dbxref=GENE3D:G3DSA:2.40.50.140,InterPro:IPR005680,InterPro:IPR006032,InterPro:IPR012340,InterPro:IPR016027,PANTHER:PTHR11652,PFAM:PF00164,PROSITE:PS00055,SUPERFAMILY:SSF50249,SwissProt:P90707,SwissProt:Q86FP7,SwissProt:Q8T3U2,SwissProt:Q9GRJ3,TIGRFAMs:TIGR00982;Derives_from=GSCOCT00028071001;Name=Cc01_g11660;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,GO:0015935,CC_EC_number:missing_EC_number,PRODUCT:40S ribosomal protein S23,CC_functional_completeness:modules,CC_gene:RPS23,CC_gene:RPS23B,CC_gene:RPS23A,CC_gene:RpS23,CC_gene:rps-23;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028071001~ 40S ribosomal protein S23~ RPS23~ modules;original_location=join(126852..126891%2C126961..127105%2C128530..128685%2C128801..128927%2C129020..129160);owner=coffea | |
| 15544 chr1 manual_curation exon 30314391 30314430 . + . Parent=GSCOCT00028071001 | |
| 15545 chr1 manual_curation exon 30314500 30314644 . + . Parent=GSCOCT00028071001 | |
| 15546 chr1 manual_curation exon 30316069 30316224 . + . Parent=GSCOCT00028071001 | |
| 15547 chr1 manual_curation exon 30316340 30316466 . + . Parent=GSCOCT00028071001 | |
| 15548 chr1 manual_curation exon 30316559 30316909 . + . Parent=GSCOCT00028071001 | |
| 15549 chr1 manual_curation CDS 30314391 30314430 . + 0 Parent=GSCOCT00028071001 | |
| 15550 chr1 manual_curation CDS 30314500 30314644 . + 1 Parent=GSCOCT00028071001 | |
| 15551 chr1 manual_curation CDS 30316069 30316224 . + 2 Parent=GSCOCT00028071001 | |
| 15552 chr1 manual_curation CDS 30316340 30316466 . + 2 Parent=GSCOCT00028071001 | |
| 15553 chr1 manual_curation CDS 30316559 30316699 . + 0 Parent=GSCOCT00028071001 | |
| 15554 chr1 manual_curation gene 30320285 30322523 . - . ID=GSCOCG00028073001;Name=Cc01_g11670 | |
| 15555 chr1 manual_curation mRNA 30320285 30322523 . - . ID=GSCOCT00028073001;Parent=GSCOCG00028073001;Name=Cc01_g11670 | |
| 15556 chr1 manual_curation polypeptide 30320517 30322291 . - . ID=GSCOCP00028073001;Dbxref=InterPro:IPR003851,PFAM:PF02701,PRODOM:PD007478,PROFILE:PS50884,PROSITE:PS01361,SwissProt:Q84TE9,SwissProt:Q8LE43,SwissProt:Q9M1E6,TAIR:AT2G28510.1,TAIR:AT3G45610.1,TAIR:AT5G60200.1,TrEMBL:B9T1Y3,TrEMBL:F6GTX3,TrEMBL:I1LR01;Derives_from=GSCOCT00028073001;Name=Cc01_g11670;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0008270,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative Dof zinc finger protein DOF2.1,CC_functional_completeness:complete,CC_gene:DOF2.1,CC_gene:DOF5.3,CC_gene:DOF3.2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028073001~ Putative Dof zinc finger protein DOF2.1~ DOF2.1~ complete;original_location=complement(join(134720..134752%2C133415..133871%2C132978..133357));owner=coffea | |
| 15557 chr1 manual_curation exon 30320285 30320896 . - . Parent=GSCOCT00028073001 | |
| 15558 chr1 manual_curation exon 30320954 30321410 . - . Parent=GSCOCT00028073001 | |
| 15559 chr1 manual_curation exon 30322259 30322523 . - . Parent=GSCOCT00028073001 | |
| 15560 chr1 manual_curation CDS 30320517 30320896 . - 1 Parent=GSCOCT00028073001 | |
| 15561 chr1 manual_curation CDS 30320954 30321410 . - 0 Parent=GSCOCT00028073001 | |
| 15562 chr1 manual_curation CDS 30322259 30322291 . - 0 Parent=GSCOCT00028073001 | |
| 15563 chr1 manual_curation gene 30338129 30342298 . + . ID=GSCOCG00028077001;Name=Cc01_g11680 | |
| 15564 chr1 manual_curation mRNA 30338129 30342298 . + . ID=GSCOCT00028077001;Parent=GSCOCG00028077001;Name=Cc01_g11680 | |
| 15565 chr1 manual_curation polypeptide 30338129 30340929 . + . ID=GSCOCP00028077001;Dbxref=InterPro:IPR001086,InterPro:IPR002912,InterPro:IPR018528,PFAM:PF00800,PFAM:PF01842,PROFILE:PS51171,PROSITE:PS00857,PROSITE:PS00858,SwissProt:Q9SA96,SwissProt:Q9SSE7,SwissProt:Q9ZUY3,TAIR:AT1G11790.1,TAIR:AT2G27820.1,TAIR:AT3G07630.1,TrEMBL:B7X943,TrEMBL:D3U716,TrEMBL:D7SKS6;Derives_from=GSCOCT00028077001;Name=Cc01_g11680;Ontology_term=CC_evidence_code:ISS,GO:0004664,GO:0008152,GO:0009094,GO:0016597,CC_EC_number:4.2.1.51,PRODUCT:Arogenate dehydratase/prephenate dehydratase 2%2C chloroplastic,CC_functional_completeness:complete,CC_gene:ADT2,CC_gene:ADT1,CC_gene:ADT3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028077001~ Arogenate dehydratase/prephenate dehydratase 2%2C chloroplastic~ ADT2~ complete;original_location=join(150590..150848%2C150939..151006%2C151114..151206%2C151669..151869%2C151948..152028%2C152342..152437%2C152531..152608%2C152735..152824%2C152922..152977%2C153127..153208%2C153331..153390);owner=coffea | |
| 15566 chr1 manual_curation exon 30338129 30338387 . + . Parent=GSCOCT00028077001 | |
| 15567 chr1 manual_curation exon 30338478 30338545 . + . Parent=GSCOCT00028077001 | |
| 15568 chr1 manual_curation exon 30338653 30338745 . + . Parent=GSCOCT00028077001 | |
| 15569 chr1 manual_curation exon 30339208 30339408 . + . Parent=GSCOCT00028077001 | |
| 15570 chr1 manual_curation exon 30339487 30339567 . + . Parent=GSCOCT00028077001 | |
| 15571 chr1 manual_curation exon 30339881 30339976 . + . Parent=GSCOCT00028077001 | |
| 15572 chr1 manual_curation exon 30340070 30340147 . + . Parent=GSCOCT00028077001 | |
| 15573 chr1 manual_curation exon 30340274 30340363 . + . Parent=GSCOCT00028077001 | |
| 15574 chr1 manual_curation exon 30340461 30340516 . + . Parent=GSCOCT00028077001 | |
| 15575 chr1 manual_curation exon 30340666 30340747 . + . Parent=GSCOCT00028077001 | |
| 15576 chr1 manual_curation exon 30340870 30342298 . + . Parent=GSCOCT00028077001 | |
| 15577 chr1 manual_curation CDS 30338129 30338387 . + 0 Parent=GSCOCT00028077001 | |
| 15578 chr1 manual_curation CDS 30338478 30338545 . + 1 Parent=GSCOCT00028077001 | |
| 15579 chr1 manual_curation CDS 30338653 30338745 . + 0 Parent=GSCOCT00028077001 | |
| 15580 chr1 manual_curation CDS 30339208 30339408 . + 0 Parent=GSCOCT00028077001 | |
| 15581 chr1 manual_curation CDS 30339487 30339567 . + 0 Parent=GSCOCT00028077001 | |
| 15582 chr1 manual_curation CDS 30339881 30339976 . + 0 Parent=GSCOCT00028077001 | |
| 15583 chr1 manual_curation CDS 30340070 30340147 . + 0 Parent=GSCOCT00028077001 | |
| 15584 chr1 manual_curation CDS 30340274 30340363 . + 0 Parent=GSCOCT00028077001 | |
| 15585 chr1 manual_curation CDS 30340461 30340516 . + 0 Parent=GSCOCT00028077001 | |
| 15586 chr1 manual_curation CDS 30340666 30340747 . + 2 Parent=GSCOCT00028077001 | |
| 15587 chr1 manual_curation CDS 30340870 30340929 . + 0 Parent=GSCOCT00028077001 | |
| 15588 chr1 manual_curation gene 30343762 30347086 . - . ID=GSCOCG00028079001;Name=Cc01_g11690 | |
| 15589 chr1 manual_curation mRNA 30343762 30347086 . - . ID=GSCOCT00028079001;Parent=GSCOCG00028079001;Name=Cc01_g11690 | |
| 15590 chr1 manual_curation polypeptide 30344060 30345908 . - . ID=GSCOCP00028079001;Dbxref=InterPro:IPR003653,PFAM:PF02902,PROFILE:PS50600,SwissProt:Q5FVJ8,SwissProt:Q96LD8,SwissProt:Q9LSS7,TAIR:AT5G60190.1,TrEMBL:B9T1Y6,TrEMBL:C6TMM4,TrEMBL:G7JRH9;Derives_from=GSCOCT00028079001;Name=Cc01_g11690;Ontology_term=CC_evidence_code:ISS,GO:0006508,GO:0008234,CC_EC_number:missing_EC_number,PRODUCT:NEDD8-specific protease 1,CC_functional_completeness:complete,CC_gene:NEDP1,CC_gene:SENP8,CC_gene:Senp8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028079001~ NEDD8-specific protease 1~ NEDP1~ complete;original_location=complement(join(158344..158369%2C156521..157214));owner=coffea | |
| 15591 chr1 manual_curation exon 30343762 30344753 . - . Parent=GSCOCT00028079001 | |
| 15592 chr1 manual_curation exon 30345883 30347086 . - . Parent=GSCOCT00028079001 | |
| 15593 chr1 manual_curation CDS 30344060 30344753 . - 2 Parent=GSCOCT00028079001 | |
| 15594 chr1 manual_curation CDS 30345883 30345908 . - 0 Parent=GSCOCT00028079001 | |
| 15595 chr1 manual_curation gene 30352072 30360938 . + . ID=GSCOCG00028080001;Name=Cc01_g11700 | |
| 15596 chr1 manual_curation mRNA 30352072 30360938 . + . ID=GSCOCT00028080001;Parent=GSCOCG00028080001;Name=Cc01_g11700 | |
| 15597 chr1 manual_curation polypeptide 30352419 30360274 . + . ID=GSCOCP00028080001;Dbxref=InterPro:IPR002490,PANTHER:PTHR11629,PFAM:PF01496,SwissProt:Q54E04,SwissProt:Q8AVM5,SwissProt:Q9HBG4,TAIR:AT2G21410.1,TAIR:AT2G28520.1,TAIR:AT4G39080.1,TrEMBL:D7SKS4,TrEMBL:I1M4P0,TrEMBL:I1MDM2;Derives_from=GSCOCT00028080001;Name=Cc01_g11700;Ontology_term=CC_evidence_code:ISS,GO:0015078,GO:0015986,CC_EC_number:missing_EC_number,PRODUCT:Putative Vacuolar proton translocating ATPase 100 kDa subunit,CC_functional_completeness:complete,CC_gene:vatM,CC_gene:atp6v0a1,CC_gene:ATP6V0A4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028080001~ Putative Vacuolar proton translocating ATPase 100 kDa subunit~ vatM~ complete;original_location=join(164880..165020%2C166409..166453%2C166940..167062%2C167200..167307%2C167787..167900%2C167991..168164%2C168433..168570%2C169039..169146%2C169264..169371%2C169485..169633%2C169916..170069%2C170524..170684%2C170885..171091%2C171246..171450%2C171519..171602%2C171918..172111%2C172194..172253%2C172531..172735);owner=coffea | |
| 15598 chr1 manual_curation exon 30352072 30352559 . + . Parent=GSCOCT00028080001 | |
| 15599 chr1 manual_curation exon 30353948 30353992 . + . Parent=GSCOCT00028080001 | |
| 15600 chr1 manual_curation exon 30354479 30354601 . + . Parent=GSCOCT00028080001 | |
| 15601 chr1 manual_curation exon 30354739 30354846 . + . Parent=GSCOCT00028080001 | |
| 15602 chr1 manual_curation exon 30355326 30355439 . + . Parent=GSCOCT00028080001 | |
| 15603 chr1 manual_curation exon 30355530 30355703 . + . Parent=GSCOCT00028080001 | |
| 15604 chr1 manual_curation exon 30355972 30356109 . + . Parent=GSCOCT00028080001 | |
| 15605 chr1 manual_curation exon 30356578 30356685 . + . Parent=GSCOCT00028080001 | |
| 15606 chr1 manual_curation exon 30356803 30356910 . + . Parent=GSCOCT00028080001 | |
| 15607 chr1 manual_curation exon 30357024 30357172 . + . Parent=GSCOCT00028080001 | |
| 15608 chr1 manual_curation exon 30357455 30357608 . + . Parent=GSCOCT00028080001 | |
| 15609 chr1 manual_curation exon 30358063 30358223 . + . Parent=GSCOCT00028080001 | |
| 15610 chr1 manual_curation exon 30358424 30358630 . + . Parent=GSCOCT00028080001 | |
| 15611 chr1 manual_curation exon 30358785 30358989 . + . Parent=GSCOCT00028080001 | |
| 15612 chr1 manual_curation exon 30359058 30359141 . + . Parent=GSCOCT00028080001 | |
| 15613 chr1 manual_curation exon 30359457 30359650 . + . Parent=GSCOCT00028080001 | |
| 15614 chr1 manual_curation exon 30359733 30359792 . + . Parent=GSCOCT00028080001 | |
| 15615 chr1 manual_curation exon 30360070 30360938 . + . Parent=GSCOCT00028080001 | |
| 15616 chr1 manual_curation CDS 30352419 30352559 . + 0 Parent=GSCOCT00028080001 | |
| 15617 chr1 manual_curation CDS 30353948 30353992 . + 0 Parent=GSCOCT00028080001 | |
| 15618 chr1 manual_curation CDS 30354479 30354601 . + 0 Parent=GSCOCT00028080001 | |
| 15619 chr1 manual_curation CDS 30354739 30354846 . + 0 Parent=GSCOCT00028080001 | |
| 15620 chr1 manual_curation CDS 30355326 30355439 . + 0 Parent=GSCOCT00028080001 | |
| 15621 chr1 manual_curation CDS 30355530 30355703 . + 0 Parent=GSCOCT00028080001 | |
| 15622 chr1 manual_curation CDS 30355972 30356109 . + 0 Parent=GSCOCT00028080001 | |
| 15623 chr1 manual_curation CDS 30356578 30356685 . + 0 Parent=GSCOCT00028080001 | |
| 15624 chr1 manual_curation CDS 30356803 30356910 . + 0 Parent=GSCOCT00028080001 | |
| 15625 chr1 manual_curation CDS 30357024 30357172 . + 0 Parent=GSCOCT00028080001 | |
| 15626 chr1 manual_curation CDS 30357455 30357608 . + 2 Parent=GSCOCT00028080001 | |
| 15627 chr1 manual_curation CDS 30358063 30358223 . + 0 Parent=GSCOCT00028080001 | |
| 15628 chr1 manual_curation CDS 30358424 30358630 . + 2 Parent=GSCOCT00028080001 | |
| 15629 chr1 manual_curation CDS 30358785 30358989 . + 2 Parent=GSCOCT00028080001 | |
| 15630 chr1 manual_curation CDS 30359058 30359141 . + 0 Parent=GSCOCT00028080001 | |
| 15631 chr1 manual_curation CDS 30359457 30359650 . + 0 Parent=GSCOCT00028080001 | |
| 15632 chr1 manual_curation CDS 30359733 30359792 . + 2 Parent=GSCOCT00028080001 | |
| 15633 chr1 manual_curation CDS 30360070 30360274 . + 2 Parent=GSCOCT00028080001 | |
| 15634 chr1 manual_curation gene 30361591 30365703 . + . ID=GSCOCG00028081001;Name=Cc01_g11710 | |
| 15635 chr1 manual_curation mRNA 30361591 30365703 . + . ID=GSCOCT00028081001;Parent=GSCOCG00028081001;Name=Cc01_g11710 | |
| 15636 chr1 manual_curation polypeptide 30362038 30365432 . + . ID=GSCOCP00028081001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019781,InterPro:IPR019782,PFAM:PF00400,PROFILE:PS50082,PROFILE:PS50294,SMART:SM00320,SUPERFAMILY:SSF50978,SwissProt:Q5TAQ9,SwissProt:Q5U2M6,SwissProt:Q8N7N5,TAIR:AT3G45620.2,TAIR:AT4G35140.1,TAIR:AT4G38480.1,TrEMBL:B9T1Y8,TrEMBL:D7SKS3,TrEMBL:Q0KIN6;Derives_from=GSCOCT00028081001;Name=Cc01_g11710;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative DDB1- and CUL4-associated factor 8,CC_functional_completeness:fragment,CC_gene:Dcaf8,CC_gene:DCAF8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028081001~ Putative DDB1- and CUL4-associated factor 8~ Dcaf8~ fragment;original_location=join(174499..174606%2C175391..175642%2C176622..176765%2C176843..177526%2C177651..177893);owner=coffea | |
| 15637 chr1 manual_curation exon 30361591 30362145 . + . Parent=GSCOCT00028081001 | |
| 15638 chr1 manual_curation exon 30362930 30363181 . + . Parent=GSCOCT00028081001 | |
| 15639 chr1 manual_curation exon 30364161 30364304 . + . Parent=GSCOCT00028081001 | |
| 15640 chr1 manual_curation exon 30364382 30365065 . + . Parent=GSCOCT00028081001 | |
| 15641 chr1 manual_curation exon 30365190 30365703 . + . Parent=GSCOCT00028081001 | |
| 15642 chr1 manual_curation CDS 30362038 30362145 . + 0 Parent=GSCOCT00028081001 | |
| 15643 chr1 manual_curation CDS 30362930 30363181 . + 0 Parent=GSCOCT00028081001 | |
| 15644 chr1 manual_curation CDS 30364161 30364304 . + 0 Parent=GSCOCT00028081001 | |
| 15645 chr1 manual_curation CDS 30364382 30365065 . + 0 Parent=GSCOCT00028081001 | |
| 15646 chr1 manual_curation CDS 30365190 30365432 . + 0 Parent=GSCOCT00028081001 | |
| 15647 chr1 manual_curation gene 30366762 30374764 . + . ID=GSCOCG00028082001;Name=Cc01_g11720 | |
| 15648 chr1 manual_curation mRNA 30366762 30374764 . + . ID=GSCOCT00028082001;Parent=GSCOCG00028082001;Name=Cc01_g11720 | |
| 15649 chr1 manual_curation polypeptide 30366815 30374534 . + . ID=GSCOCP00028082001;Dbxref=TAIR:AT5G60150.1,TrEMBL:B9H6B7,TrEMBL:B9T1Y9,TrEMBL:D7SKS2;Derives_from=GSCOCT00028082001;Name=Cc01_g11720;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028082001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(179276..179396%2C180235..180444%2C180549..180814%2C182123..184649%2C184777..184951%2C185065..185179%2C185766..185846%2C186918..186995);owner=coffea | |
| 15650 chr1 manual_curation exon 30366762 30366935 . + . Parent=GSCOCT00028082001 | |
| 15651 chr1 manual_curation exon 30367774 30367983 . + . Parent=GSCOCT00028082001 | |
| 15652 chr1 manual_curation exon 30368088 30368353 . + . Parent=GSCOCT00028082001 | |
| 15653 chr1 manual_curation exon 30369662 30372188 . + . Parent=GSCOCT00028082001 | |
| 15654 chr1 manual_curation exon 30372316 30372490 . + . Parent=GSCOCT00028082001 | |
| 15655 chr1 manual_curation exon 30372604 30372718 . + . Parent=GSCOCT00028082001 | |
| 15656 chr1 manual_curation exon 30373305 30373385 . + . Parent=GSCOCT00028082001 | |
| 15657 chr1 manual_curation exon 30374457 30374764 . + . Parent=GSCOCT00028082001 | |
| 15658 chr1 manual_curation CDS 30366815 30366935 . + 0 Parent=GSCOCT00028082001 | |
| 15659 chr1 manual_curation CDS 30367774 30367983 . + 1 Parent=GSCOCT00028082001 | |
| 15660 chr1 manual_curation CDS 30368088 30368353 . + 1 Parent=GSCOCT00028082001 | |
| 15661 chr1 manual_curation CDS 30369662 30372188 . + 0 Parent=GSCOCT00028082001 | |
| 15662 chr1 manual_curation CDS 30372316 30372490 . + 1 Parent=GSCOCT00028082001 | |
| 15663 chr1 manual_curation CDS 30372604 30372718 . + 2 Parent=GSCOCT00028082001 | |
| 15664 chr1 manual_curation CDS 30373305 30373385 . + 0 Parent=GSCOCT00028082001 | |
| 15665 chr1 manual_curation CDS 30374457 30374534 . + 0 Parent=GSCOCT00028082001 | |
| 15666 chr1 manual_curation gene 30375601 30378067 . - . ID=GSCOCG00028083001;Name=Cc01_g11730 | |
| 15667 chr1 manual_curation mRNA 30375601 30378067 . - . ID=GSCOCT00028083001;Parent=GSCOCG00028083001;Name=Cc01_g11730 | |
| 15668 chr1 manual_curation polypeptide 30375601 30378067 . - . ID=GSCOCP00028083001;Dbxref=InterPro:IPR000109,InterPro:IPR016196,PFAM:PF00854,SUPERFAMILY:SSF103473,SwissProt:Q9M175,SwissProt:Q9M1E1,SwissProt:Q9M1E2,TAIR:AT3G45650.1,TAIR:AT3G45660.1,TAIR:AT3G45680.1,TrEMBL:F6GTW9,TrEMBL:Q6L3J1,TrEMBL:Q6L3J2;Derives_from=GSCOCT00028083001;Name=Cc01_g11730;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006857,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Nitrate excretion transporter 1,CC_functional_completeness:complete,CC_gene:NAXT1,CC_gene:At3g45660,CC_gene:At3g45680;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028083001~ Nitrate excretion transporter 1~ NAXT1~ complete;original_location=complement(join(190423..190528%2C190045..190262%2C189237..189766%2C188062..188899));owner=coffea | |
| 15669 chr1 manual_curation exon 30375601 30376438 . - . Parent=GSCOCT00028083001 | |
| 15670 chr1 manual_curation exon 30376776 30377305 . - . Parent=GSCOCT00028083001 | |
| 15671 chr1 manual_curation exon 30377584 30377801 . - . Parent=GSCOCT00028083001 | |
| 15672 chr1 manual_curation exon 30377962 30378067 . - . Parent=GSCOCT00028083001 | |
| 15673 chr1 manual_curation CDS 30375601 30376438 . - 2 Parent=GSCOCT00028083001 | |
| 15674 chr1 manual_curation CDS 30376776 30377305 . - 0 Parent=GSCOCT00028083001 | |
| 15675 chr1 manual_curation CDS 30377584 30377801 . - 1 Parent=GSCOCT00028083001 | |
| 15676 chr1 manual_curation CDS 30377962 30378067 . - 0 Parent=GSCOCT00028083001 | |
| 15677 chr1 manual_curation gene 30385132 30391094 . + . ID=GSCOCG00028084001;Name=Cc01_g11740 | |
| 15678 chr1 manual_curation mRNA 30385132 30391094 . + . ID=GSCOCT00028084001;Parent=GSCOCG00028084001;Name=Cc01_g11740 | |
| 15679 chr1 manual_curation polypeptide 30385304 30391094 . + . ID=GSCOCP00028084001;Dbxref=InterPro:IPR000109,InterPro:IPR016196,PFAM:PF00854,SUPERFAMILY:SSF103473,SwissProt:Q9M173,SwissProt:Q9M1E1,SwissProt:Q9M1E2,TAIR:AT3G45650.1,TAIR:AT3G45660.1,TAIR:AT3G45700.1,TrEMBL:F6GTW9,TrEMBL:Q6L3J1,TrEMBL:Q6L3J2;Derives_from=GSCOCT00028084001;Name=Cc01_g11740;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006857,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative Nitrate excretion transporter 1,CC_functional_completeness:complete,CC_gene:NAXT1,CC_gene:At3g45660,CC_gene:At3g45700;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028084001~ Putative Nitrate excretion transporter 1~ NAXT1~ complete;original_location=join(197765..197873%2C198014..198231%2C198335..198864%2C198973..199676%2C201729..201913%2C202017..202393%2C202718..203555);owner=coffea | |
| 15680 chr1 manual_curation exon 30385132 30385412 . + . Parent=GSCOCT00028084001 | |
| 15681 chr1 manual_curation exon 30385553 30385770 . + . Parent=GSCOCT00028084001 | |
| 15682 chr1 manual_curation exon 30385874 30386403 . + . Parent=GSCOCT00028084001 | |
| 15683 chr1 manual_curation exon 30386512 30387215 . + . Parent=GSCOCT00028084001 | |
| 15684 chr1 manual_curation exon 30389268 30389452 . + . Parent=GSCOCT00028084001 | |
| 15685 chr1 manual_curation exon 30389556 30389932 . + . Parent=GSCOCT00028084001 | |
| 15686 chr1 manual_curation exon 30390257 30391094 . + . Parent=GSCOCT00028084001 | |
| 15687 chr1 manual_curation CDS 30385304 30385412 . + 0 Parent=GSCOCT00028084001 | |
| 15688 chr1 manual_curation CDS 30385553 30385770 . + 1 Parent=GSCOCT00028084001 | |
| 15689 chr1 manual_curation CDS 30385874 30386403 . + 0 Parent=GSCOCT00028084001 | |
| 15690 chr1 manual_curation CDS 30386512 30387215 . + 2 Parent=GSCOCT00028084001 | |
| 15691 chr1 manual_curation CDS 30389268 30389452 . + 1 Parent=GSCOCT00028084001 | |
| 15692 chr1 manual_curation CDS 30389556 30389932 . + 0 Parent=GSCOCT00028084001 | |
| 15693 chr1 manual_curation CDS 30390257 30391094 . + 2 Parent=GSCOCT00028084001 | |
| 15694 chr1 manual_curation gene 30395073 30397387 . - . ID=GSCOCG00028085001;Name=Cc01_g11750 | |
| 15695 chr1 manual_curation mRNA 30395073 30397387 . - . ID=GSCOCT00028085001;Parent=GSCOCG00028085001;Name=Cc01_g11750 | |
| 15696 chr1 manual_curation polypeptide 30395073 30397184 . - . ID=GSCOCP00028085001;Dbxref=InterPro:IPR000109,InterPro:IPR016196,InterPro:IPR018456,PFAM:PF00854,PROSITE:PS01022,SUPERFAMILY:SSF103473,SwissProt:Q9M173,SwissProt:Q9M1E1,SwissProt:Q9M1E2,TAIR:AT3G45650.1,TAIR:AT3G45660.1,TAIR:AT3G45700.1,TrEMBL:F6GTW9,TrEMBL:Q6L3J1,TrEMBL:Q6L3J2;Derives_from=GSCOCT00028085001;Name=Cc01_g11750;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006857,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Nitrate excretion transporter 1,CC_functional_completeness:complete,CC_gene:NAXT1,CC_gene:At3g45660,CC_gene:At3g45700;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028085001~ Nitrate excretion transporter 1~ NAXT1~ complete;original_location=complement(join(209537..209645%2C209200..209417%2C208577..209106%2C207534..208371));owner=coffea | |
| 15697 chr1 manual_curation exon 30395073 30395910 . - . Parent=GSCOCT00028085001 | |
| 15698 chr1 manual_curation exon 30396116 30396645 . - . Parent=GSCOCT00028085001 | |
| 15699 chr1 manual_curation exon 30396739 30396956 . - . Parent=GSCOCT00028085001 | |
| 15700 chr1 manual_curation exon 30397076 30397387 . - . Parent=GSCOCT00028085001 | |
| 15701 chr1 manual_curation CDS 30395073 30395910 . - 2 Parent=GSCOCT00028085001 | |
| 15702 chr1 manual_curation CDS 30396116 30396645 . - 0 Parent=GSCOCT00028085001 | |
| 15703 chr1 manual_curation CDS 30396739 30396956 . - 1 Parent=GSCOCT00028085001 | |
| 15704 chr1 manual_curation CDS 30397076 30397184 . - 0 Parent=GSCOCT00028085001 | |
| 15705 chr1 manual_curation gene 30400045 30403481 . - . ID=GSCOCG00028086001;Name=Cc01_g11760 | |
| 15706 chr1 manual_curation mRNA 30400045 30403481 . - . ID=GSCOCT00028086001;Parent=GSCOCG00028086001;Name=Cc01_g11760 | |
| 15707 chr1 manual_curation polypeptide 30400045 30403481 . - . ID=GSCOCP00028086001;Dbxref=InterPro:IPR000109,InterPro:IPR016196,InterPro:IPR018062,InterPro:IPR018456,PFAM:PF00854,PROSITE:PS00041,PROSITE:PS01022,SUPERFAMILY:SSF103473,SwissProt:Q9M174,SwissProt:Q9M1E1,SwissProt:Q9M1E2,TAIR:AT3G45650.1,TAIR:AT3G45660.1,TAIR:AT3G45690.1,TrEMBL:F6GTW8,TrEMBL:F6GTW9,TrEMBL:Q6L3J1;Derives_from=GSCOCT00028086001;Name=Cc01_g11760;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006857,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative Nitrate excretion transporter 1,CC_functional_completeness:complete,CC_gene:NAXT1,CC_gene:At3g45690,CC_gene:At3g45660;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028086001~ Putative Nitrate excretion transporter 1~ NAXT1~ complete;original_location=complement(join(215730..215942%2C214927..215425%2C214423..214504%2C212949..213351%2C212506..212835));owner=coffea | |
| 15708 chr1 manual_curation exon 30400045 30400374 . - . Parent=GSCOCT00028086001 | |
| 15709 chr1 manual_curation exon 30400488 30400890 . - . Parent=GSCOCT00028086001 | |
| 15710 chr1 manual_curation exon 30401962 30402043 . - . Parent=GSCOCT00028086001 | |
| 15711 chr1 manual_curation exon 30402466 30402964 . - . Parent=GSCOCT00028086001 | |
| 15712 chr1 manual_curation exon 30403269 30403481 . - . Parent=GSCOCT00028086001 | |
| 15713 chr1 manual_curation CDS 30400045 30400374 . - 0 Parent=GSCOCT00028086001 | |
| 15714 chr1 manual_curation CDS 30400488 30400890 . - 2 Parent=GSCOCT00028086001 | |
| 15715 chr1 manual_curation CDS 30401962 30402043 . - 1 Parent=GSCOCT00028086001 | |
| 15716 chr1 manual_curation CDS 30402466 30402964 . - 0 Parent=GSCOCT00028086001 | |
| 15717 chr1 manual_curation CDS 30403269 30403481 . - 0 Parent=GSCOCT00028086001 | |
| 15718 chr1 manual_curation gene 30407290 30410101 . - . ID=GSCOCG00028087001;Name=Cc01_g11770 | |
| 15719 chr1 manual_curation mRNA 30407290 30410101 . - . ID=GSCOCT00028087001;Parent=GSCOCG00028087001;Name=Cc01_g11770 | |
| 15720 chr1 manual_curation polypeptide 30407290 30410101 . - . ID=GSCOCP00028087001;Dbxref=InterPro:IPR000109,InterPro:IPR016196,InterPro:IPR018456,PFAM:PF00854,PROSITE:PS01022,SUPERFAMILY:SSF103473,SwissProt:Q9M175,SwissProt:Q9M1E1,SwissProt:Q9M1E2,TAIR:AT3G45650.1,TAIR:AT3G45660.1,TAIR:AT3G45680.1,TrEMBL:B9T1Z5,TrEMBL:F6GTW8,TrEMBL:F6GTW9;Derives_from=GSCOCT00028087001;Name=Cc01_g11770;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006857,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Nitrate excretion transporter 1,CC_functional_completeness:complete,CC_gene:NAXT1,CC_gene:At3g45660,CC_gene:At3g45680;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028087001~ Nitrate excretion transporter 1~ NAXT1~ complete;original_location=complement(join(222463..222562%2C221996..222213%2C221271..221812%2C219751..220573));owner=coffea | |
| 15721 chr1 manual_curation exon 30407290 30408112 . - . Parent=GSCOCT00028087001 | |
| 15722 chr1 manual_curation exon 30408810 30409351 . - . Parent=GSCOCT00028087001 | |
| 15723 chr1 manual_curation exon 30409535 30409752 . - . Parent=GSCOCT00028087001 | |
| 15724 chr1 manual_curation exon 30410002 30410101 . - . Parent=GSCOCT00028087001 | |
| 15725 chr1 manual_curation CDS 30407290 30408112 . - 2 Parent=GSCOCT00028087001 | |
| 15726 chr1 manual_curation CDS 30408810 30409351 . - 0 Parent=GSCOCT00028087001 | |
| 15727 chr1 manual_curation CDS 30409535 30409752 . - 1 Parent=GSCOCT00028087001 | |
| 15728 chr1 manual_curation CDS 30410002 30410101 . - 0 Parent=GSCOCT00028087001 | |
| 15729 chr1 manual_curation gene 30410171 30416473 . - . ID=GSCOCG00028088001;Name=Cc01_g11780 | |
| 15730 chr1 manual_curation mRNA 30410171 30416473 . - . ID=GSCOCT00028088001;Parent=GSCOCG00028088001;Name=Cc01_g11780 | |
| 15731 chr1 manual_curation polypeptide 30410171 30416403 . - . ID=GSCOCP00028088001;Dbxref=InterPro:IPR000109,InterPro:IPR016196,PFAM:PF00854,SUPERFAMILY:SSF103473,SwissProt:Q9M175,SwissProt:Q9M1E1,SwissProt:Q9M1E2,TAIR:AT3G45650.1,TAIR:AT3G45660.1,TAIR:AT3G45680.1,TrEMBL:B9T1Z5,TrEMBL:F6GTW8,TrEMBL:F6GTW9;Derives_from=GSCOCT00028088001;Name=Cc01_g11780;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006857,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Probable nitrate excretion transporter 2,CC_functional_completeness:complete,CC_gene:At3g45660,CC_gene:At3g45680,CC_gene:NAXT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028088001~ Probable nitrate excretion transporter 2~ At3g45660~ complete;original_location=complement(join(228771..228864%2C228403..228624%2C226647..226658%2C225392..225917%2C224595..225075%2C222632..222811));owner=coffea | |
| 15732 chr1 manual_curation exon 30410171 30410350 . - . Parent=GSCOCT00028088001 | |
| 15733 chr1 manual_curation exon 30412134 30412614 . - . Parent=GSCOCT00028088001 | |
| 15734 chr1 manual_curation exon 30412931 30413456 . - . Parent=GSCOCT00028088001 | |
| 15735 chr1 manual_curation exon 30414186 30414197 . - . Parent=GSCOCT00028088001 | |
| 15736 chr1 manual_curation exon 30415942 30416163 . - . Parent=GSCOCT00028088001 | |
| 15737 chr1 manual_curation exon 30416310 30416473 . - . Parent=GSCOCT00028088001 | |
| 15738 chr1 manual_curation CDS 30410171 30410350 . - 0 Parent=GSCOCT00028088001 | |
| 15739 chr1 manual_curation CDS 30412134 30412614 . - 2 Parent=GSCOCT00028088001 | |
| 15740 chr1 manual_curation CDS 30412931 30413456 . - 1 Parent=GSCOCT00028088001 | |
| 15741 chr1 manual_curation CDS 30414186 30414197 . - 1 Parent=GSCOCT00028088001 | |
| 15742 chr1 manual_curation CDS 30415942 30416163 . - 1 Parent=GSCOCT00028088001 | |
| 15743 chr1 manual_curation CDS 30416310 30416403 . - 0 Parent=GSCOCT00028088001 | |
| 15744 chr1 manual_curation gene 30427547 30430913 . - . ID=GSCOCG00028089001;Name=Cc01_g11790 | |
| 15745 chr1 manual_curation mRNA 30427547 30430913 . - . ID=GSCOCT00028089001;Parent=GSCOCG00028089001;Name=Cc01_g11790 | |
| 15746 chr1 manual_curation polypeptide 30428146 30430476 . - . ID=GSCOCP00028089001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR003527,InterPro:IPR008271,InterPro:IPR008351,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PRINTS:PR01772,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,PROSITE:PS01351,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q06060,SwissProt:Q39023,SwissProt:Q84UI5,TAIR:AT2G43790.1,TAIR:AT3G45640.1,TAIR:AT4G01370.1,TrEMBL:A2IB54,TrEMBL:G9C080;Derives_from=GSCOCT00028089001;Name=Cc01_g11790;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0004707,GO:0005524,GO:0006468,CC_EC_number:2.7.11.24,CC_EC_number:2.7.11.24,PRODUCT:Mitogen-activated protein kinase 3,CC_functional_completeness:complete,CC_gene:MPK3,CC_gene:MPK1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028089001~ Mitogen-activated protein kinase 3~ MPK3~ complete;original_location=complement(join(242903..242937%2C242665..242794%2C242090..242227%2C241626..241958%2C241326..241509%2C240607..240776));owner=coffea | |
| 15747 chr1 manual_curation exon 30427547 30428315 . - . Parent=GSCOCT00028089001 | |
| 15748 chr1 manual_curation exon 30428865 30429048 . - . Parent=GSCOCT00028089001 | |
| 15749 chr1 manual_curation exon 30429165 30429497 . - . Parent=GSCOCT00028089001 | |
| 15750 chr1 manual_curation exon 30429629 30429766 . - . Parent=GSCOCT00028089001 | |
| 15751 chr1 manual_curation exon 30430204 30430333 . - . Parent=GSCOCT00028089001 | |
| 15752 chr1 manual_curation exon 30430442 30430913 . - . Parent=GSCOCT00028089001 | |
| 15753 chr1 manual_curation CDS 30428146 30428315 . - 1 Parent=GSCOCT00028089001 | |
| 15754 chr1 manual_curation CDS 30428865 30429048 . - 0 Parent=GSCOCT00028089001 | |
| 15755 chr1 manual_curation CDS 30429165 30429497 . - 0 Parent=GSCOCT00028089001 | |
| 15756 chr1 manual_curation CDS 30429629 30429766 . - 0 Parent=GSCOCT00028089001 | |
| 15757 chr1 manual_curation CDS 30430204 30430333 . - 2 Parent=GSCOCT00028089001 | |
| 15758 chr1 manual_curation CDS 30430442 30430476 . - 0 Parent=GSCOCT00028089001 | |
| 15759 chr1 manual_curation gene 30435064 30438835 . - . ID=GSCOCG00028091001;Name=Cc01_g11800 | |
| 15760 chr1 manual_curation mRNA 30435064 30438835 . - . ID=GSCOCT00028091001;Parent=GSCOCG00028091001;Name=Cc01_g11800 | |
| 15761 chr1 manual_curation polypeptide 30435401 30438077 . - . ID=GSCOCP00028091001;Dbxref=InterPro:IPR002016,InterPro:IPR002207,InterPro:IPR010255,InterPro:IPR019793,InterPro:IPR019794,PFAM:PF00141,PRINTS:PR00458,PRINTS:PR00459,PROFILE:PS50873,PROSITE:PS00435,PROSITE:PS00436,SUPERFAMILY:SSF48113,SwissProt:P48534,SwissProt:Q05431,SwissProt:Q9FE01,TAIR:AT1G07890.3,TAIR:AT3G09640.1,TAIR:AT4G35000.1,TrEMBL:Q40589,TrEMBL:Q42941,TrEMBL:Q52QQ4;Derives_from=GSCOCT00028091001;Name=Cc01_g11800;Ontology_term=CC_evidence_code:ISS,GO:0004601,GO:0006979,GO:0020037,GO:0055114,CC_EC_number:1.11.1.11,PRODUCT:L-ascorbate peroxidase 2%2C cytosolic,CC_functional_completeness:complete,CC_gene:APX2,CC_gene:APX1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028091001~ L-ascorbate peroxidase 2%2C cytosolic~ APX2~ complete;original_location=complement(join(250420..250538%2C250101..250275%2C249924..249989%2C248820..248868%2C248577..248662%2C248365..248444%2C248168..248270%2C247975..248033%2C247862..247877));owner=coffea | |
| 15762 chr1 manual_curation exon 30438712 30438835 . - . Parent=GSCOCT00028091001 | |
| 15763 chr1 manual_curation exon 30435064 30435416 . - . Parent=GSCOCT00028091001 | |
| 15764 chr1 manual_curation exon 30435514 30435572 . - . Parent=GSCOCT00028091001 | |
| 15765 chr1 manual_curation exon 30435707 30435809 . - . Parent=GSCOCT00028091001 | |
| 15766 chr1 manual_curation exon 30435904 30435983 . - . Parent=GSCOCT00028091001 | |
| 15767 chr1 manual_curation exon 30436116 30436201 . - . Parent=GSCOCT00028091001 | |
| 15768 chr1 manual_curation exon 30436359 30436407 . - . Parent=GSCOCT00028091001 | |
| 15769 chr1 manual_curation exon 30437463 30437528 . - . Parent=GSCOCT00028091001 | |
| 15770 chr1 manual_curation exon 30437640 30437814 . - . Parent=GSCOCT00028091001 | |
| 15771 chr1 manual_curation exon 30437959 30438082 . - . Parent=GSCOCT00028091001 | |
| 15772 chr1 manual_curation CDS 30435401 30435416 . - 2 Parent=GSCOCT00028091001 | |
| 15773 chr1 manual_curation CDS 30435514 30435572 . - 0 Parent=GSCOCT00028091001 | |
| 15774 chr1 manual_curation CDS 30435707 30435809 . - 2 Parent=GSCOCT00028091001 | |
| 15775 chr1 manual_curation CDS 30435904 30435983 . - 0 Parent=GSCOCT00028091001 | |
| 15776 chr1 manual_curation CDS 30436116 30436201 . - 1 Parent=GSCOCT00028091001 | |
| 15777 chr1 manual_curation CDS 30436359 30436407 . - 0 Parent=GSCOCT00028091001 | |
| 15778 chr1 manual_curation CDS 30437463 30437528 . - 0 Parent=GSCOCT00028091001 | |
| 15779 chr1 manual_curation CDS 30437640 30437814 . - 2 Parent=GSCOCT00028091001 | |
| 15780 chr1 manual_curation CDS 30437959 30438077 . - 0 Parent=GSCOCT00028091001 | |
| 15781 chr1 manual_curation gene 30443296 30447992 . + . ID=GSCOCG00028092001;Name=Cc01_g11810 | |
| 15782 chr1 manual_curation mRNA 30443296 30447992 . + . ID=GSCOCT00028092001;Parent=GSCOCG00028092001;Name=Cc01_g11810 | |
| 15783 chr1 manual_curation polypeptide 30443429 30447700 . + . ID=GSCOCP00028092001;Dbxref=GENE3D:G3DSA:2.102.10.10,InterPro:IPR001663,InterPro:IPR015879,InterPro:IPR017941,PANTHER:PTHR21266:SF2,PFAM:PF00355,PFAM:PF00848,PRINTS:PR00090,PROFILE:PS51296,SUPERFAMILY:SSF50022,SwissProt:O04121,SwissProt:O22553,SwissProt:Q9SZR0,TAIR:AT4G29890.1,TrEMBL:B9HAN7,TrEMBL:D2DEK9,TrEMBL:D7SQF8;Derives_from=GSCOCT00028092001;Name=Cc01_g11810;Ontology_term=CC_evidence_code:ISS,GO:0005506,GO:0006725,GO:0016491,GO:0019439,GO:0055114,CC_EC_number:1.14.15.7,PRODUCT:Choline monooxygenase%2C chloroplastic,CC_functional_completeness:complete,CC_gene:At4g29890,CC_gene:CMO;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028092001~ Choline monooxygenase%2C chloroplastic~ At4g29890~ complete;original_location=join(255890..256214%2C256411..256456%2C256684..256819%2C257314..257388%2C257485..257697%2C257953..258048%2C258300..258421%2C258513..258606%2C259830..259880%2C260024..260161);owner=coffea | |
| 15784 chr1 manual_curation exon 30443296 30443753 . + . Parent=GSCOCT00028092001 | |
| 15785 chr1 manual_curation exon 30443950 30443995 . + . Parent=GSCOCT00028092001 | |
| 15786 chr1 manual_curation exon 30444223 30444358 . + . Parent=GSCOCT00028092001 | |
| 15787 chr1 manual_curation exon 30444853 30444927 . + . Parent=GSCOCT00028092001 | |
| 15788 chr1 manual_curation exon 30445024 30445236 . + . Parent=GSCOCT00028092001 | |
| 15789 chr1 manual_curation exon 30445492 30445587 . + . Parent=GSCOCT00028092001 | |
| 15790 chr1 manual_curation exon 30445839 30445960 . + . Parent=GSCOCT00028092001 | |
| 15791 chr1 manual_curation exon 30446052 30446145 . + . Parent=GSCOCT00028092001 | |
| 15792 chr1 manual_curation exon 30447369 30447419 . + . Parent=GSCOCT00028092001 | |
| 15793 chr1 manual_curation exon 30447563 30447992 . + . Parent=GSCOCT00028092001 | |
| 15794 chr1 manual_curation CDS 30443429 30443753 . + 0 Parent=GSCOCT00028092001 | |
| 15795 chr1 manual_curation CDS 30443950 30443995 . + 1 Parent=GSCOCT00028092001 | |
| 15796 chr1 manual_curation CDS 30444223 30444358 . + 2 Parent=GSCOCT00028092001 | |
| 15797 chr1 manual_curation CDS 30444853 30444927 . + 0 Parent=GSCOCT00028092001 | |
| 15798 chr1 manual_curation CDS 30445024 30445236 . + 0 Parent=GSCOCT00028092001 | |
| 15799 chr1 manual_curation CDS 30445492 30445587 . + 0 Parent=GSCOCT00028092001 | |
| 15800 chr1 manual_curation CDS 30445839 30445960 . + 0 Parent=GSCOCT00028092001 | |
| 15801 chr1 manual_curation CDS 30446052 30446145 . + 2 Parent=GSCOCT00028092001 | |
| 15802 chr1 manual_curation CDS 30447369 30447419 . + 0 Parent=GSCOCT00028092001 | |
| 15803 chr1 manual_curation CDS 30447563 30447700 . + 0 Parent=GSCOCT00028092001 | |
| 15804 chr1 manual_curation gene 30448673 30456376 . + . ID=GSCOCG00028093001;Name=Cc01_g11820 | |
| 15805 chr1 manual_curation mRNA 30448673 30456376 . + . ID=GSCOCT00028093001;Parent=GSCOCG00028093001;Name=Cc01_g11820 | |
| 15806 chr1 manual_curation polypeptide 30449567 30456376 . + . ID=GSCOCP00028093001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR001841,InterPro:IPR003954,InterPro:IPR012677,PFAM:PF00076,PROFILE:PS50089,PROFILE:PS50102,SMART:SM00361,SwissProt:O95628,SwissProt:P34909,SwissProt:Q8BT14,TAIR:AT2G28540.2,TAIR:AT3G45630.1,TAIR:AT5G60170.2,TrEMBL:D7SKR3,TrEMBL:G7JRI8,TrEMBL:I1LKA5;Derives_from=GSCOCT00028093001;Name=Cc01_g11820;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative RNA binding (RRM/RBD/RNP motifs) family protein,CC_functional_completeness:complete,CC_gene:CNOT4,CC_gene:Cnot4,CC_gene:MOT2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028093001~ Putative RNA binding (RRM/RBD/RNP motifs) family protein~ CNOT4~ complete;original_location=join(262028..262120%2C263209..263336%2C263437..263590%2C263681..263790%2C263935..264018%2C264096..264144%2C264332..264423%2C265006..265144%2C265236..265315%2C265396..266822%2C267876..267986%2C268272..268837);owner=coffea | |
| 15807 chr1 manual_curation exon 30448673 30448764 . + . Parent=GSCOCT00028093001 | |
| 15808 chr1 manual_curation exon 30449097 30449205 . + . Parent=GSCOCT00028093001 | |
| 15809 chr1 manual_curation exon 30449561 30449659 . + . Parent=GSCOCT00028093001 | |
| 15810 chr1 manual_curation exon 30450748 30450875 . + . Parent=GSCOCT00028093001 | |
| 15811 chr1 manual_curation exon 30450976 30451129 . + . Parent=GSCOCT00028093001 | |
| 15812 chr1 manual_curation exon 30451220 30451329 . + . Parent=GSCOCT00028093001 | |
| 15813 chr1 manual_curation exon 30451474 30451557 . + . Parent=GSCOCT00028093001 | |
| 15814 chr1 manual_curation exon 30451635 30451683 . + . Parent=GSCOCT00028093001 | |
| 15815 chr1 manual_curation exon 30451871 30451962 . + . Parent=GSCOCT00028093001 | |
| 15816 chr1 manual_curation exon 30452545 30452683 . + . Parent=GSCOCT00028093001 | |
| 15817 chr1 manual_curation exon 30452775 30452854 . + . Parent=GSCOCT00028093001 | |
| 15818 chr1 manual_curation exon 30452935 30454361 . + . Parent=GSCOCT00028093001 | |
| 15819 chr1 manual_curation exon 30455415 30455525 . + . Parent=GSCOCT00028093001 | |
| 15820 chr1 manual_curation exon 30455811 30456376 . + . Parent=GSCOCT00028093001 | |
| 15821 chr1 manual_curation CDS 30449567 30449659 . + 0 Parent=GSCOCT00028093001 | |
| 15822 chr1 manual_curation CDS 30450748 30450875 . + 0 Parent=GSCOCT00028093001 | |
| 15823 chr1 manual_curation CDS 30450976 30451129 . + 2 Parent=GSCOCT00028093001 | |
| 15824 chr1 manual_curation CDS 30451220 30451329 . + 0 Parent=GSCOCT00028093001 | |
| 15825 chr1 manual_curation CDS 30451474 30451557 . + 2 Parent=GSCOCT00028093001 | |
| 15826 chr1 manual_curation CDS 30451635 30451683 . + 2 Parent=GSCOCT00028093001 | |
| 15827 chr1 manual_curation CDS 30451871 30451962 . + 0 Parent=GSCOCT00028093001 | |
| 15828 chr1 manual_curation CDS 30452545 30452683 . + 2 Parent=GSCOCT00028093001 | |
| 15829 chr1 manual_curation CDS 30452775 30452854 . + 0 Parent=GSCOCT00028093001 | |
| 15830 chr1 manual_curation CDS 30452935 30454361 . + 2 Parent=GSCOCT00028093001 | |
| 15831 chr1 manual_curation CDS 30455415 30455525 . + 1 Parent=GSCOCT00028093001 | |
| 15832 chr1 manual_curation CDS 30455811 30456376 . + 1 Parent=GSCOCT00028093001 | |
| 15833 chr1 manual_curation gene 30456435 30457311 . + . ID=GSCOCG00028094001;Name=Cc01_g11830 | |
| 15834 chr1 manual_curation mRNA 30456435 30457311 . + . ID=GSCOCT00028094001;Parent=GSCOCG00028094001;Name=Cc01_g11830 | |
| 15835 chr1 manual_curation polypeptide 30456594 30457201 . + . ID=GSCOCP00028094001;Derives_from=GSCOCT00028094001;Name=Cc01_g11830;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028094001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(269055..269091%2C269559..269662);owner=coffea | |
| 15836 chr1 manual_curation exon 30456435 30456630 . + . Parent=GSCOCT00028094001 | |
| 15837 chr1 manual_curation exon 30457098 30457311 . + . Parent=GSCOCT00028094001 | |
| 15838 chr1 manual_curation CDS 30456594 30456630 . + 0 Parent=GSCOCT00028094001 | |
| 15839 chr1 manual_curation CDS 30457098 30457201 . + 1 Parent=GSCOCT00028094001 | |
| 15840 chr1 manual_curation gene 30464170 30468154 . - . ID=GSCOCG00028097001;Name=Cc01_g11840 | |
| 15841 chr1 manual_curation mRNA 30464170 30468154 . - . ID=GSCOCT00028097001;Parent=GSCOCG00028097001;Name=Cc01_g11840 | |
| 15842 chr1 manual_curation polypeptide 30464380 30467633 . - . ID=GSCOCP00028097001;Dbxref=GENE3D:G3DSA:3.30.730.10,InterPro:IPR001471,InterPro:IPR016177,PFAM:PF00847,PRINTS:PR00367,PROFILE:PS51032,SMART:SM00380,SUPERFAMILY:SSF54171,SwissProt:P47927,SwissProt:Q9FH95,SwissProt:Q9SK03,TAIR:AT2G28550.3,TAIR:AT4G36920.1,TAIR:AT5G67180.1,TrEMBL:B9SW78,TrEMBL:F6KQN4,TrEMBL:F6KQN5;Derives_from=GSCOCT00028097001;Name=Cc01_g11840;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,CC_EC_number:missing_EC_number,PRODUCT:Putative Ethylene-responsive transcription factor RAP2-7,CC_functional_completeness:complete,CC_gene:RAP2-7,CC_gene:AP2,CC_gene:TOE3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028097001~ Putative Ethylene-responsive transcription factor RAP2-7~ RAP2-7~ complete;original_location=complement(join(279538..280094%2C279380..279405%2C279207..279237%2C279023..279110%2C278717..278862%2C278474..278518%2C278239..278357%2C277996..278114%2C277643..277756%2C276841..277116));owner=coffea | |
| 15843 chr1 manual_curation exon 30464170 30464655 . - . Parent=GSCOCT00028097001 | |
| 15844 chr1 manual_curation exon 30465182 30465295 . - . Parent=GSCOCT00028097001 | |
| 15845 chr1 manual_curation exon 30465535 30465653 . - . Parent=GSCOCT00028097001 | |
| 15846 chr1 manual_curation exon 30465778 30465896 . - . Parent=GSCOCT00028097001 | |
| 15847 chr1 manual_curation exon 30466013 30466057 . - . Parent=GSCOCT00028097001 | |
| 15848 chr1 manual_curation exon 30466256 30466401 . - . Parent=GSCOCT00028097001 | |
| 15849 chr1 manual_curation exon 30466562 30466649 . - . Parent=GSCOCT00028097001 | |
| 15850 chr1 manual_curation exon 30466746 30466776 . - . Parent=GSCOCT00028097001 | |
| 15851 chr1 manual_curation exon 30466919 30466944 . - . Parent=GSCOCT00028097001 | |
| 15852 chr1 manual_curation exon 30467077 30468154 . - . Parent=GSCOCT00028097001 | |
| 15853 chr1 manual_curation CDS 30464380 30464655 . - 0 Parent=GSCOCT00028097001 | |
| 15854 chr1 manual_curation CDS 30465182 30465295 . - 0 Parent=GSCOCT00028097001 | |
| 15855 chr1 manual_curation CDS 30465535 30465653 . - 1 Parent=GSCOCT00028097001 | |
| 15856 chr1 manual_curation CDS 30465778 30465896 . - 2 Parent=GSCOCT00028097001 | |
| 15857 chr1 manual_curation CDS 30466013 30466057 . - 2 Parent=GSCOCT00028097001 | |
| 15858 chr1 manual_curation CDS 30466256 30466401 . - 0 Parent=GSCOCT00028097001 | |
| 15859 chr1 manual_curation CDS 30466562 30466649 . - 2 Parent=GSCOCT00028097001 | |
| 15860 chr1 manual_curation CDS 30466746 30466776 . - 1 Parent=GSCOCT00028097001 | |
| 15861 chr1 manual_curation CDS 30466919 30466944 . - 2 Parent=GSCOCT00028097001 | |
| 15862 chr1 manual_curation CDS 30467077 30467633 . - 0 Parent=GSCOCT00028097001 | |
| 15863 chr1 manual_curation gene 30486941 30491940 . - . ID=GSCOCG00028098001;Name=Cc01_g11850 | |
| 15864 chr1 manual_curation mRNA 30486941 30491940 . - . ID=GSCOCT00028098001;Parent=GSCOCG00028098001;Name=Cc01_g11850 | |
| 15865 chr1 manual_curation polypeptide 30487305 30491758 . - . ID=GSCOCP00028098001;Dbxref=InterPro:IPR003593,InterPro:IPR013632,InterPro:IPR016467,InterPro:IPR020588,PFAM:PF08423,PIR:PIRSF005856,PROFILE:PS50162,SMART:SM00382,SwissProt:O15315,SwissProt:O35719,SwissProt:Q9SK02,TAIR:AT1G07745.1,TAIR:AT2G28560.1,TAIR:AT5G20850.1,TrEMBL:D7SKR1,TrEMBL:G7IU37,TrEMBL:I1MDL7;Derives_from=GSCOCT00028098001;Name=Cc01_g11850;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003677,GO:0005524,GO:0006259,GO:0008094,GO:0017111,CC_EC_number:missing_EC_number,PRODUCT:DNA repair protein RAD51 homolog 2,CC_functional_completeness:complete,CC_gene:RAD51B,CC_gene:Rad51b;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028098001~ DNA repair protein RAD51 homolog 2~ RAD51B~ complete;original_location=complement(join(304136..304219%2C303462..303575%2C303175..303327%2C302512..302615%2C302365..302428%2C301706..301761%2C301019..301099%2C300610..300669%2C300411..300502%2C300217..300330%2C299766..299920));owner=coffea | |
| 15866 chr1 manual_curation exon 30486941 30487459 . - . Parent=GSCOCT00028098001 | |
| 15867 chr1 manual_curation exon 30487756 30487869 . - . Parent=GSCOCT00028098001 | |
| 15868 chr1 manual_curation exon 30487950 30488041 . - . Parent=GSCOCT00028098001 | |
| 15869 chr1 manual_curation exon 30488149 30488208 . - . Parent=GSCOCT00028098001 | |
| 15870 chr1 manual_curation exon 30488558 30488638 . - . Parent=GSCOCT00028098001 | |
| 15871 chr1 manual_curation exon 30489245 30489300 . - . Parent=GSCOCT00028098001 | |
| 15872 chr1 manual_curation exon 30489904 30489967 . - . Parent=GSCOCT00028098001 | |
| 15873 chr1 manual_curation exon 30490051 30490154 . - . Parent=GSCOCT00028098001 | |
| 15874 chr1 manual_curation exon 30490714 30490866 . - . Parent=GSCOCT00028098001 | |
| 15875 chr1 manual_curation exon 30491001 30491114 . - . Parent=GSCOCT00028098001 | |
| 15876 chr1 manual_curation exon 30491675 30491940 . - . Parent=GSCOCT00028098001 | |
| 15877 chr1 manual_curation CDS 30487305 30487459 . - 1 Parent=GSCOCT00028098001 | |
| 15878 chr1 manual_curation CDS 30487756 30487869 . - 1 Parent=GSCOCT00028098001 | |
| 15879 chr1 manual_curation CDS 30487950 30488041 . - 2 Parent=GSCOCT00028098001 | |
| 15880 chr1 manual_curation CDS 30488149 30488208 . - 2 Parent=GSCOCT00028098001 | |
| 15881 chr1 manual_curation CDS 30488558 30488638 . - 2 Parent=GSCOCT00028098001 | |
| 15882 chr1 manual_curation CDS 30489245 30489300 . - 0 Parent=GSCOCT00028098001 | |
| 15883 chr1 manual_curation CDS 30489904 30489967 . - 2 Parent=GSCOCT00028098001 | |
| 15884 chr1 manual_curation CDS 30490051 30490154 . - 0 Parent=GSCOCT00028098001 | |
| 15885 chr1 manual_curation CDS 30490714 30490866 . - 0 Parent=GSCOCT00028098001 | |
| 15886 chr1 manual_curation CDS 30491001 30491114 . - 0 Parent=GSCOCT00028098001 | |
| 15887 chr1 manual_curation CDS 30491675 30491758 . - 0 Parent=GSCOCT00028098001 | |
| 15888 chr1 manual_curation gene 30557785 30558508 . + . ID=GSCOCG00028101001;Name=Cc01_g11860 | |
| 15889 chr1 manual_curation mRNA 30557785 30558508 . + . ID=GSCOCT00028101001;Parent=GSCOCG00028101001;Name=Cc01_g11860 | |
| 15890 chr1 manual_curation polypeptide 30557881 30558096 . + . ID=GSCOCP00028101001;Derives_from=GSCOCT00028101001;Name=Cc01_g11860;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028101001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=370342..370557;owner=coffea | |
| 15891 chr1 manual_curation exon 30557785 30558508 . + . Parent=GSCOCT00028101001 | |
| 15892 chr1 manual_curation CDS 30557881 30558096 . + 0 Parent=GSCOCT00028101001 | |
| 15893 chr1 manual_curation gene 30563323 30565945 . + . ID=GSCOCG00028103001;Name=Cc01_g11870 | |
| 15894 chr1 manual_curation mRNA 30563323 30565945 . + . ID=GSCOCT00028103001;Parent=GSCOCG00028103001;Name=Cc01_g11870 | |
| 15895 chr1 manual_curation polypeptide 30563429 30565545 . + . ID=GSCOCP00028103001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR003527,InterPro:IPR008271,InterPro:IPR008351,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PRINTS:PR01772,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,PROSITE:PS01351,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q40353,SwissProt:Q40531,SwissProt:Q9LQQ9,TAIR:AT1G07880.2,TAIR:AT4G01370.1,TAIR:AT4G11330.1,TrEMBL:B2NIC1,TrEMBL:D7SKQ9,TrEMBL:Q9AYN8;Derives_from=GSCOCT00028103001;Name=Cc01_g11870;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0004707,GO:0005524,GO:0006468,CC_EC_number:2.7.11.24,CC_EC_number:2.7.11.24,PRODUCT:Mitogen-activated protein kinase homolog NTF6,CC_functional_completeness:complete,CC_gene:NTF6,CC_gene:MPK13,CC_gene:MMK2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028103001~ Mitogen-activated protein kinase homolog NTF6~ NTF6~ complete;original_location=join(375890..376062%2C376195..376324%2C376526..376663%2C377047..377379%2C377537..377720%2C377831..378006);owner=coffea | |
| 15896 chr1 manual_curation exon 30563323 30563601 . + . Parent=GSCOCT00028103001 | |
| 15897 chr1 manual_curation exon 30563734 30563863 . + . Parent=GSCOCT00028103001 | |
| 15898 chr1 manual_curation exon 30564065 30564202 . + . Parent=GSCOCT00028103001 | |
| 15899 chr1 manual_curation exon 30564586 30564918 . + . Parent=GSCOCT00028103001 | |
| 15900 chr1 manual_curation exon 30565076 30565259 . + . Parent=GSCOCT00028103001 | |
| 15901 chr1 manual_curation exon 30565370 30565945 . + . Parent=GSCOCT00028103001 | |
| 15902 chr1 manual_curation CDS 30563429 30563601 . + 0 Parent=GSCOCT00028103001 | |
| 15903 chr1 manual_curation CDS 30563734 30563863 . + 2 Parent=GSCOCT00028103001 | |
| 15904 chr1 manual_curation CDS 30564065 30564202 . + 0 Parent=GSCOCT00028103001 | |
| 15905 chr1 manual_curation CDS 30564586 30564918 . + 0 Parent=GSCOCT00028103001 | |
| 15906 chr1 manual_curation CDS 30565076 30565259 . + 0 Parent=GSCOCT00028103001 | |
| 15907 chr1 manual_curation CDS 30565370 30565545 . + 1 Parent=GSCOCT00028103001 | |
| 15908 chr1 manual_curation gene 30568421 30573134 . + . ID=GSCOCG00028104001;Name=Cc01_g11880 | |
| 15909 chr1 manual_curation mRNA 30568421 30573134 . + . ID=GSCOCT00028104001;Parent=GSCOCG00028104001;Name=Cc01_g11880 | |
| 15910 chr1 manual_curation polypeptide 30568642 30573009 . + . ID=GSCOCP00028104001;Dbxref=InterPro:IPR006353,InterPro:IPR006357,SwissProt:O13899,SwissProt:P36151,SwissProt:Q91WM2,TAIR:AT3G45740.1,TIGRFAMs:TIGR01456,TIGRFAMs:TIGR01460,TrEMBL:B9SW67,TrEMBL:D7SKQ8,TrEMBL:Q9M169;Derives_from=GSCOCT00028104001;Name=Cc01_g11880;Ontology_term=CC_evidence_code:ISS,GO:0008152,GO:0016787,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized protein YKR070W,CC_functional_completeness:complete,CC_gene:YKR070W,CC_gene:SPAC22A12.08c,CC_gene:Cecr5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028104001~ Putative Uncharacterized protein YKR070W~ YKR070W~ complete;original_location=join(381103..381230%2C381368..381486%2C381751..381786%2C382028..382101%2C382273..382313%2C383393..383464%2C383575..383761%2C384402..384497%2C384590..384657%2C384746..384941%2C385024..385107%2C385411..385470);owner=coffea | |
| 15911 chr1 manual_curation exon 30568421 30568769 . + . Parent=GSCOCT00028104001 | |
| 15912 chr1 manual_curation exon 30568907 30569025 . + . Parent=GSCOCT00028104001 | |
| 15913 chr1 manual_curation exon 30569290 30569325 . + . Parent=GSCOCT00028104001 | |
| 15914 chr1 manual_curation exon 30569567 30569640 . + . Parent=GSCOCT00028104001 | |
| 15915 chr1 manual_curation exon 30569812 30569852 . + . Parent=GSCOCT00028104001 | |
| 15916 chr1 manual_curation exon 30570932 30571003 . + . Parent=GSCOCT00028104001 | |
| 15917 chr1 manual_curation exon 30571114 30571300 . + . Parent=GSCOCT00028104001 | |
| 15918 chr1 manual_curation exon 30571941 30572036 . + . Parent=GSCOCT00028104001 | |
| 15919 chr1 manual_curation exon 30572129 30572196 . + . Parent=GSCOCT00028104001 | |
| 15920 chr1 manual_curation exon 30572285 30572480 . + . Parent=GSCOCT00028104001 | |
| 15921 chr1 manual_curation exon 30572563 30572646 . + . Parent=GSCOCT00028104001 | |
| 15922 chr1 manual_curation exon 30572950 30573134 . + . Parent=GSCOCT00028104001 | |
| 15923 chr1 manual_curation CDS 30568642 30568769 . + 0 Parent=GSCOCT00028104001 | |
| 15924 chr1 manual_curation CDS 30568907 30569025 . + 2 Parent=GSCOCT00028104001 | |
| 15925 chr1 manual_curation CDS 30569290 30569325 . + 1 Parent=GSCOCT00028104001 | |
| 15926 chr1 manual_curation CDS 30569567 30569640 . + 1 Parent=GSCOCT00028104001 | |
| 15927 chr1 manual_curation CDS 30569812 30569852 . + 0 Parent=GSCOCT00028104001 | |
| 15928 chr1 manual_curation CDS 30570932 30571003 . + 2 Parent=GSCOCT00028104001 | |
| 15929 chr1 manual_curation CDS 30571114 30571300 . + 2 Parent=GSCOCT00028104001 | |
| 15930 chr1 manual_curation CDS 30571941 30572036 . + 0 Parent=GSCOCT00028104001 | |
| 15931 chr1 manual_curation CDS 30572129 30572196 . + 0 Parent=GSCOCT00028104001 | |
| 15932 chr1 manual_curation CDS 30572285 30572480 . + 2 Parent=GSCOCT00028104001 | |
| 15933 chr1 manual_curation CDS 30572563 30572646 . + 0 Parent=GSCOCT00028104001 | |
| 15934 chr1 manual_curation CDS 30572950 30573009 . + 0 Parent=GSCOCT00028104001 | |
| 15935 chr1 manual_curation gene 30573754 30578156 . - . ID=GSCOCG00028105001;Name=Cc01_g11890 | |
| 15936 chr1 manual_curation mRNA 30573754 30578156 . - . ID=GSCOCT00028105001;Parent=GSCOCG00028105001;Name=Cc01_g11890 | |
| 15937 chr1 manual_curation polypeptide 30574134 30577972 . - . ID=GSCOCP00028105001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR002085,InterPro:IPR011032,InterPro:IPR013149,InterPro:IPR013154,InterPro:IPR016040,InterPro:IPR020843,PANTHER:PTHR11695,PFAM:PF00107,PFAM:PF08240,SMART:SM00829,SUPERFAMILY:SSF50129,SwissProt:Q8LCU7,SwissProt:Q9DCS3,SwissProt:Q9Z311,TAIR:AT1G23740.1,TAIR:AT3G45770.1,TrEMBL:B9N6L8,TrEMBL:B9SW66,TrEMBL:F6GTW5;Derives_from=GSCOCT00028105001;Name=Cc01_g11890;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,GO:0008270,GO:0016491,GO:0055114,CC_EC_number:1.3.1.38,PRODUCT:Probable trans-2-enoyl-CoA reductase%2C mitochondrial,CC_functional_completeness:complete,CC_gene:At3g45770,CC_gene:Mecr;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028105001~ Probable trans-2-enoyl-CoA reductase%2C mitochondrial~ At3g45770~ complete;original_location=complement(join(390136..390433%2C389902..390033%2C389209..389352%2C389030..389132%2C388282..388381%2C388007..388083%2C387854..387932%2C387045..387163%2C386595..386688));owner=coffea | |
| 15938 chr1 manual_curation exon 30573754 30574227 . - . Parent=GSCOCT00028105001 | |
| 15939 chr1 manual_curation exon 30574584 30574702 . - . Parent=GSCOCT00028105001 | |
| 15940 chr1 manual_curation exon 30575393 30575471 . - . Parent=GSCOCT00028105001 | |
| 15941 chr1 manual_curation exon 30575546 30575622 . - . Parent=GSCOCT00028105001 | |
| 15942 chr1 manual_curation exon 30575821 30575920 . - . Parent=GSCOCT00028105001 | |
| 15943 chr1 manual_curation exon 30576569 30576671 . - . Parent=GSCOCT00028105001 | |
| 15944 chr1 manual_curation exon 30576748 30576891 . - . Parent=GSCOCT00028105001 | |
| 15945 chr1 manual_curation exon 30577441 30577572 . - . Parent=GSCOCT00028105001 | |
| 15946 chr1 manual_curation exon 30577675 30578156 . - . Parent=GSCOCT00028105001 | |
| 15947 chr1 manual_curation CDS 30574134 30574227 . - 2 Parent=GSCOCT00028105001 | |
| 15948 chr1 manual_curation CDS 30574584 30574702 . - 0 Parent=GSCOCT00028105001 | |
| 15949 chr1 manual_curation CDS 30575393 30575471 . - 2 Parent=GSCOCT00028105001 | |
| 15950 chr1 manual_curation CDS 30575546 30575622 . - 0 Parent=GSCOCT00028105001 | |
| 15951 chr1 manual_curation CDS 30575821 30575920 . - 2 Parent=GSCOCT00028105001 | |
| 15952 chr1 manual_curation CDS 30576569 30576671 . - 1 Parent=GSCOCT00028105001 | |
| 15953 chr1 manual_curation CDS 30576748 30576891 . - 1 Parent=GSCOCT00028105001 | |
| 15954 chr1 manual_curation CDS 30577441 30577572 . - 1 Parent=GSCOCT00028105001 | |
| 15955 chr1 manual_curation CDS 30577675 30577972 . - 0 Parent=GSCOCT00028105001 | |
| 15956 chr1 manual_curation gene 30584745 30589022 . + . ID=GSCOCG00028106001;Name=Cc01_g11900 | |
| 15957 chr1 manual_curation mRNA 30584745 30589022 . + . ID=GSCOCT00028106001;Parent=GSCOCG00028106001;Name=Cc01_g11900 | |
| 15958 chr1 manual_curation polypeptide 30585047 30588723 . + . ID=GSCOCP00028106001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q9FE20,SwissProt:Q9LQQ8,SwissProt:Q9SFT7,TAIR:AT1G07870.2,TAIR:AT2G28590.1,TAIR:AT5G18610.1,TrEMBL:F6JSQ7,TrEMBL:I1LK97,TrEMBL:I1LR21;Derives_from=GSCOCT00028106001;Name=Cc01_g11900;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Probable serine/threonine-protein kinase RLCKVII,CC_functional_completeness:complete,CC_gene:At1g07870,CC_gene:PBS1,CC_gene:At3g07070;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028106001~ Probable serine/threonine-protein kinase RLCKVII~ At1g07870~ complete;original_location=join(397508..397631%2C398483..398718%2C398875..399064%2C399249..399640%2C400846..401184);owner=coffea | |
| 15959 chr1 manual_curation exon 30584745 30585170 . + . Parent=GSCOCT00028106001 | |
| 15960 chr1 manual_curation exon 30586022 30586257 . + . Parent=GSCOCT00028106001 | |
| 15961 chr1 manual_curation exon 30586414 30586603 . + . Parent=GSCOCT00028106001 | |
| 15962 chr1 manual_curation exon 30586788 30587179 . + . Parent=GSCOCT00028106001 | |
| 15963 chr1 manual_curation exon 30588385 30589022 . + . Parent=GSCOCT00028106001 | |
| 15964 chr1 manual_curation CDS 30585047 30585170 . + 0 Parent=GSCOCT00028106001 | |
| 15965 chr1 manual_curation CDS 30586022 30586257 . + 1 Parent=GSCOCT00028106001 | |
| 15966 chr1 manual_curation CDS 30586414 30586603 . + 0 Parent=GSCOCT00028106001 | |
| 15967 chr1 manual_curation CDS 30586788 30587179 . + 1 Parent=GSCOCT00028106001 | |
| 15968 chr1 manual_curation CDS 30588385 30588723 . + 0 Parent=GSCOCT00028106001 | |
| 15969 chr1 manual_curation gene 30593875 30596969 . - . ID=GSCOCG00028107001;Name=Cc01_g11910 | |
| 15970 chr1 manual_curation mRNA 30593875 30596969 . - . ID=GSCOCT00028107001;Parent=GSCOCG00028107001;Name=Cc01_g11910 | |
| 15971 chr1 manual_curation polypeptide 30594180 30596502 . - . ID=GSCOCP00028107001;Dbxref=InterPro:IPR006740,PFAM:PF04646,TAIR:AT1G07850.1,TAIR:AT4G11350.1,TAIR:AT4G23490.1,TrEMBL:B9T0R4,TrEMBL:F6GTW3,TrEMBL:G7IU85;Derives_from=GSCOCT00028107001;Name=Cc01_g11910;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF604),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028107001~ Protein of unknown function (DUF604)~ unknown_gene~ complete;original_location=complement(join(408073..408963%2C407220..407762%2C406641..406742));owner=coffea | |
| 15972 chr1 manual_curation exon 30593875 30594281 . - . Parent=GSCOCT00028107001 | |
| 15973 chr1 manual_curation exon 30594759 30595301 . - . Parent=GSCOCT00028107001 | |
| 15974 chr1 manual_curation exon 30595612 30596969 . - . Parent=GSCOCT00028107001 | |
| 15975 chr1 manual_curation CDS 30594180 30594281 . - 0 Parent=GSCOCT00028107001 | |
| 15976 chr1 manual_curation CDS 30594759 30595301 . - 0 Parent=GSCOCT00028107001 | |
| 15977 chr1 manual_curation CDS 30595612 30596502 . - 0 Parent=GSCOCT00028107001 | |
| 15978 chr1 manual_curation gene 30601435 30601572 . - . ID=GSCOCG00028108001;Name=Cc01_g11920 | |
| 15979 chr1 manual_curation mRNA 30601435 30601572 . - . ID=GSCOCT00028108001;Parent=GSCOCG00028108001;Name=Cc01_g11920 | |
| 15980 chr1 manual_curation polypeptide 30601435 30601572 . - . ID=GSCOCP00028108001;Derives_from=GSCOCT00028108001;Name=Cc01_g11920;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028108001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(413896..414033);owner=coffea | |
| 15981 chr1 manual_curation exon 30601435 30601572 . - . Parent=GSCOCT00028108001 | |
| 15982 chr1 manual_curation CDS 30601435 30601572 . - 0 Parent=GSCOCT00028108001 | |
| 15983 chr1 manual_curation gene 30606597 30618176 . + . ID=GSCOCG00028109001;Name=Cc01_g11930 | |
| 15984 chr1 manual_curation mRNA 30606597 30618176 . + . ID=GSCOCT00028109001;Parent=GSCOCG00028109001;Name=Cc01_g11930 | |
| 15985 chr1 manual_curation polypeptide 30606881 30617831 . + . ID=GSCOCP00028109001;Dbxref=InterPro:IPR000014,InterPro:IPR000700,InterPro:IPR000719,InterPro:IPR001610,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR013767,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00989,PROFILE:PS50011,PROFILE:PS50112,PROFILE:PS50113,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00086,SMART:SM00091,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:O48963,SwissProt:Q2QYY8,SwissProt:Q2RBR1,TAIR:AT2G36350.1,TAIR:AT3G45780.1,TAIR:AT5G58140.2,TIGRFAMs:TIGR00229,TrEMBL:A3EX92,TrEMBL:B9GIK8,TrEMBL:F6GTW2;Derives_from=GSCOCT00028109001;Name=Cc01_g11930;Ontology_term=CC_evidence_code:ISS,GO:0000155,GO:0000160,GO:0004672,GO:0004674,GO:0004871,GO:0005524,GO:0006468,GO:0007165,CC_EC_number:2.7.11.13,PRODUCT:Phototropin-1,CC_functional_completeness:complete,CC_gene:PHOT1,CC_gene:PHOT1A,CC_gene:PHOT1B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028109001~ Phototropin-1~ PHOT1~ complete;original_location=join(419342..419987%2C420124..420298%2C420388..420570%2C421895..421986%2C422446..422746%2C422902..423136%2C423251..423321%2C424408..424514%2C424620..424669%2C424789..424893%2C425094..425153%2C425248..425337%2C425562..425638%2C426254..426338%2C426626..426706%2C426949..427052%2C427634..427683%2C428429..428535%2C428629..428751%2C429093..429144%2C429299..429411%2C429710..429850%2C430191..430292);owner=coffea | |
| 15986 chr1 manual_curation exon 30617936 30618176 . + . Parent=GSCOCT00028109001 | |
| 15987 chr1 manual_curation exon 30606597 30607526 . + . Parent=GSCOCT00028109001 | |
| 15988 chr1 manual_curation exon 30607663 30607837 . + . Parent=GSCOCT00028109001 | |
| 15989 chr1 manual_curation exon 30607927 30608109 . + . Parent=GSCOCT00028109001 | |
| 15990 chr1 manual_curation exon 30609434 30609525 . + . Parent=GSCOCT00028109001 | |
| 15991 chr1 manual_curation exon 30609985 30610285 . + . Parent=GSCOCT00028109001 | |
| 15992 chr1 manual_curation exon 30610441 30610675 . + . Parent=GSCOCT00028109001 | |
| 15993 chr1 manual_curation exon 30610790 30610860 . + . Parent=GSCOCT00028109001 | |
| 15994 chr1 manual_curation exon 30611947 30612053 . + . Parent=GSCOCT00028109001 | |
| 15995 chr1 manual_curation exon 30612159 30612208 . + . Parent=GSCOCT00028109001 | |
| 15996 chr1 manual_curation exon 30612328 30612432 . + . Parent=GSCOCT00028109001 | |
| 15997 chr1 manual_curation exon 30612633 30612692 . + . Parent=GSCOCT00028109001 | |
| 15998 chr1 manual_curation exon 30612787 30612876 . + . Parent=GSCOCT00028109001 | |
| 15999 chr1 manual_curation exon 30613101 30613177 . + . Parent=GSCOCT00028109001 | |
| 16000 chr1 manual_curation exon 30613793 30613877 . + . Parent=GSCOCT00028109001 | |
| 16001 chr1 manual_curation exon 30614165 30614245 . + . Parent=GSCOCT00028109001 | |
| 16002 chr1 manual_curation exon 30614488 30614591 . + . Parent=GSCOCT00028109001 | |
| 16003 chr1 manual_curation exon 30615173 30615222 . + . Parent=GSCOCT00028109001 | |
| 16004 chr1 manual_curation exon 30615968 30616074 . + . Parent=GSCOCT00028109001 | |
| 16005 chr1 manual_curation exon 30616168 30616290 . + . Parent=GSCOCT00028109001 | |
| 16006 chr1 manual_curation exon 30616632 30616683 . + . Parent=GSCOCT00028109001 | |
| 16007 chr1 manual_curation exon 30616838 30616950 . + . Parent=GSCOCT00028109001 | |
| 16008 chr1 manual_curation exon 30617249 30617389 . + . Parent=GSCOCT00028109001 | |
| 16009 chr1 manual_curation exon 30617730 30617855 . + . Parent=GSCOCT00028109001 | |
| 16010 chr1 manual_curation CDS 30606881 30607526 . + 0 Parent=GSCOCT00028109001 | |
| 16011 chr1 manual_curation CDS 30607663 30607837 . + 1 Parent=GSCOCT00028109001 | |
| 16012 chr1 manual_curation CDS 30607927 30608109 . + 2 Parent=GSCOCT00028109001 | |
| 16013 chr1 manual_curation CDS 30609434 30609525 . + 2 Parent=GSCOCT00028109001 | |
| 16014 chr1 manual_curation CDS 30609985 30610285 . + 1 Parent=GSCOCT00028109001 | |
| 16015 chr1 manual_curation CDS 30610441 30610675 . + 2 Parent=GSCOCT00028109001 | |
| 16016 chr1 manual_curation CDS 30610790 30610860 . + 0 Parent=GSCOCT00028109001 | |
| 16017 chr1 manual_curation CDS 30611947 30612053 . + 2 Parent=GSCOCT00028109001 | |
| 16018 chr1 manual_curation CDS 30612159 30612208 . + 1 Parent=GSCOCT00028109001 | |
| 16019 chr1 manual_curation CDS 30612328 30612432 . + 0 Parent=GSCOCT00028109001 | |
| 16020 chr1 manual_curation CDS 30612633 30612692 . + 0 Parent=GSCOCT00028109001 | |
| 16021 chr1 manual_curation CDS 30612787 30612876 . + 0 Parent=GSCOCT00028109001 | |
| 16022 chr1 manual_curation CDS 30613101 30613177 . + 0 Parent=GSCOCT00028109001 | |
| 16023 chr1 manual_curation CDS 30613793 30613877 . + 2 Parent=GSCOCT00028109001 | |
| 16024 chr1 manual_curation CDS 30614165 30614245 . + 0 Parent=GSCOCT00028109001 | |
| 16025 chr1 manual_curation CDS 30614488 30614591 . + 0 Parent=GSCOCT00028109001 | |
| 16026 chr1 manual_curation CDS 30615173 30615222 . + 2 Parent=GSCOCT00028109001 | |
| 16027 chr1 manual_curation CDS 30615968 30616074 . + 1 Parent=GSCOCT00028109001 | |
| 16028 chr1 manual_curation CDS 30616168 30616290 . + 0 Parent=GSCOCT00028109001 | |
| 16029 chr1 manual_curation CDS 30616632 30616683 . + 0 Parent=GSCOCT00028109001 | |
| 16030 chr1 manual_curation CDS 30616838 30616950 . + 1 Parent=GSCOCT00028109001 | |
| 16031 chr1 manual_curation CDS 30617249 30617389 . + 0 Parent=GSCOCT00028109001 | |
| 16032 chr1 manual_curation CDS 30617730 30617831 . + 0 Parent=GSCOCT00028109001 | |
| 16033 chr1 manual_curation gene 30622129 30624652 . + . ID=GSCOCG00028110001;Name=Cc01_g11940 | |
| 16034 chr1 manual_curation mRNA 30622129 30624652 . + . ID=GSCOCT00028110001;Parent=GSCOCG00028110001;Name=Cc01_g11940 | |
| 16035 chr1 manual_curation polypeptide 30622129 30624385 . + . ID=GSCOCP00028110001;Dbxref=InterPro:IPR000210,InterPro:IPR013069,PFAM:PF00651,PROFILE:PS50097,SwissProt:Q9CAJ9,SwissProt:Q9LVG9,SwissProt:Q9SVM0,TAIR:AT1G63850.1,TAIR:AT3G50780.1,TAIR:AT5G60050.1,TrEMBL:B9T0R1,TrEMBL:F6GTW1,TrEMBL:I1LR24;Derives_from=GSCOCT00028110001;Name=Cc01_g11940;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:BTB/POZ domain-containing protein At5g60050,CC_functional_completeness:complete,CC_gene:At5g60050,CC_gene:At1g63850,CC_gene:At3g50780;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028110001~ BTB/POZ domain-containing protein At5g60050~ At5g60050~ complete;original_location=join(434590..435255%2C435893..436846);owner=coffea | |
| 16036 chr1 manual_curation exon 30624487 30624652 . + . Parent=GSCOCT00028110001 | |
| 16037 chr1 manual_curation exon 30622129 30622794 . + . Parent=GSCOCT00028110001 | |
| 16038 chr1 manual_curation exon 30623432 30624387 . + . Parent=GSCOCT00028110001 | |
| 16039 chr1 manual_curation CDS 30622129 30622794 . + 0 Parent=GSCOCT00028110001 | |
| 16040 chr1 manual_curation CDS 30623432 30624385 . + 0 Parent=GSCOCT00028110001 | |
| 16041 chr1 manual_curation gene 30626256 30627822 . - . ID=GSCOCG00028111001;Name=Cc01_g11950 | |
| 16042 chr1 manual_curation mRNA 30626256 30627822 . - . ID=GSCOCT00028111001;Parent=GSCOCG00028111001;Name=Cc01_g11950 | |
| 16043 chr1 manual_curation polypeptide 30626589 30627822 . - . ID=GSCOCP00028111001;Dbxref=InterPro:IPR007081,InterPro:IPR015700,PANTHER:PTHR19376:SF15,PFAM:PF04998,SwissProt:A4IF62,SwissProt:O14802,SwissProt:Q5ZL98,TAIR:AT3G57660.1,TAIR:AT4G35800.1,TAIR:AT5G60040.2,TrEMBL:C5YBD9,TrEMBL:F6GTW0,TrEMBL:Q7X881;Derives_from=GSCOCT00028111001;Name=Cc01_g11950;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003899,GO:0005634,GO:0006350,GO:0008270,GO:0032549,CC_EC_number:missing_EC_number,PRODUCT:nuclear RNA polymerase C1,CC_functional_completeness:fragment,CC_gene:POLR3A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028111001~ nuclear RNA polymerase C1~ POLR3A~ fragment;original_location=complement(join(439990..440283%2C439660..439862%2C439050..439098));owner=coffea | |
| 16044 chr1 manual_curation exon 30626256 30626637 . - . Parent=GSCOCT00028111001 | |
| 16045 chr1 manual_curation exon 30627199 30627401 . - . Parent=GSCOCT00028111001 | |
| 16046 chr1 manual_curation exon 30627529 30627822 . - . Parent=GSCOCT00028111001 | |
| 16047 chr1 manual_curation CDS 30626589 30626637 . - 2 Parent=GSCOCT00028111001 | |
| 16048 chr1 manual_curation CDS 30627199 30627401 . - 0 Parent=GSCOCT00028111001 | |
| 16049 chr1 manual_curation CDS 30627529 30627822 . - 0 Parent=GSCOCT00028111001 | |
| 16050 chr1 manual_curation gene 30687632 30688823 . + . ID=GSCOCG00028115001;Name=Cc01_g11960 | |
| 16051 chr1 manual_curation mRNA 30687632 30688823 . + . ID=GSCOCT00028115001;Parent=GSCOCG00028115001;Name=Cc01_g11960 | |
| 16052 chr1 manual_curation polypeptide 30687632 30688823 . + . ID=GSCOCP00028115001;Dbxref=InterPro:IPR001356,InterPro:IPR009057,PFAM:PF00046,PROFILE:PS50071,SMART:SM00389,SUPERFAMILY:SSF46689,SwissProt:A2XZR3,SwissProt:Q5W7C3,SwissProt:Q9SIB4,TAIR:AT2G28610.1,TAIR:AT3G11260.1,TAIR:AT3G18010.1,TrEMBL:A5AKT8,TrEMBL:C9WKA6,TrEMBL:D9N1B8;Derives_from=GSCOCT00028115001;Name=Cc01_g11960;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0043565,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:WOX3,CC_gene:WOX2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028115001~ Putative uncharacterized protein~ WOX3~ complete;original_location=join(500093..500461%2C501006..501284);owner=coffea | |
| 16053 chr1 manual_curation exon 30687632 30688000 . + . Parent=GSCOCT00028115001 | |
| 16054 chr1 manual_curation exon 30688545 30688823 . + . Parent=GSCOCT00028115001 | |
| 16055 chr1 manual_curation CDS 30687632 30688000 . + 0 Parent=GSCOCT00028115001 | |
| 16056 chr1 manual_curation CDS 30688545 30688823 . + 0 Parent=GSCOCT00028115001 | |
| 16057 chr1 manual_curation gene 30692713 30693313 . - . ID=GSCOCG00028116001;Name=Cc01_g11970 | |
| 16058 chr1 manual_curation mRNA 30692713 30693313 . - . ID=GSCOCT00028116001;Parent=GSCOCG00028116001;Name=Cc01_g11970 | |
| 16059 chr1 manual_curation polypeptide 30692713 30693313 . - . ID=GSCOCP00028116001;Dbxref=InterPro:IPR013121,PFAM:PF08030,SwissProt:Q9FIJ0,SwissProt:Q9FJD6,SwissProt:Q9LZU9,TAIR:AT3G45810.1,TAIR:AT5G47910.1,TAIR:AT5G60010.1,TrEMBL:G7L3G1,TrEMBL:I1KJX2,TrEMBL:I1N2F7;Derives_from=GSCOCT00028116001;Name=Cc01_g11970;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative respiratory burst oxidase homolog protein H,CC_functional_completeness:fragment,CC_gene:RBOHH,CC_gene:RBOHJ,CC_gene:RBOHD;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028116001~ Putative respiratory burst oxidase homolog protein H~ RBOHH~ fragment;original_location=complement(join(505754..505774%2C505540..505569%2C505368..505456%2C505174..505264));owner=coffea | |
| 16060 chr1 manual_curation exon 30692713 30692803 . - . Parent=GSCOCT00028116001 | |
| 16061 chr1 manual_curation exon 30692907 30692995 . - . Parent=GSCOCT00028116001 | |
| 16062 chr1 manual_curation exon 30693079 30693108 . - . Parent=GSCOCT00028116001 | |
| 16063 chr1 manual_curation exon 30693293 30693313 . - . Parent=GSCOCT00028116001 | |
| 16064 chr1 manual_curation CDS 30692713 30692803 . - 2 Parent=GSCOCT00028116001 | |
| 16065 chr1 manual_curation CDS 30692907 30692995 . - 0 Parent=GSCOCT00028116001 | |
| 16066 chr1 manual_curation CDS 30693079 30693108 . - 0 Parent=GSCOCT00028116001 | |
| 16067 chr1 manual_curation CDS 30693293 30693313 . - 0 Parent=GSCOCT00028116001 | |
| 16068 chr1 manual_curation gene 30700433 30704717 . - . ID=GSCOCG00028117001;Name=Cc01_g11980 | |
| 16069 chr1 manual_curation mRNA 30700433 30704717 . - . ID=GSCOCT00028117001;Parent=GSCOCG00028117001;Name=Cc01_g11980 | |
| 16070 chr1 manual_curation polypeptide 30700433 30704717 . - . ID=GSCOCP00028117001;Dbxref=GENE3D:G3DSA:1.10.238.10,InterPro:IPR002048,InterPro:IPR011992,InterPro:IPR013112,InterPro:IPR013121,InterPro:IPR013130,InterPro:IPR013623,InterPro:IPR017927,InterPro:IPR017938,InterPro:IPR018247,InterPro:IPR018249,PFAM:PF01794,PFAM:PF08022,PFAM:PF08030,PFAM:PF08414,PROFILE:PS50222,PROFILE:PS51384,PROSITE:PS00018,SMART:SM00054,SUPERFAMILY:SSF63380,SwissProt:O48538,SwissProt:Q9FJD6,SwissProt:Q9LZU9,TAIR:AT1G64060.1,TAIR:AT3G45810.1,TAIR:AT5G60010.1,TrEMBL:D7SKP3,TrEMBL:I1KJX2,TrEMBL:Q15FD2;Derives_from=GSCOCT00028117001;Name=Cc01_g11980;Ontology_term=CC_evidence_code:ISS,GO:0004601,GO:0005506,GO:0005509,GO:0009055,GO:0016021,GO:0016491,GO:0050660,GO:0055114,CC_EC_number:1.6.3.1,CC_EC_number:1.6.3.1,PRODUCT:Putative respiratory burst oxidase homolog protein H,CC_functional_completeness:complete,CC_gene:RBOHH,CC_gene:RBOHJ,CC_gene:RBOHF;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028117001~ Putative respiratory burst oxidase homolog protein H~ RBOHH~ complete;original_location=complement(join(516803..517178%2C516537..516702%2C516388..516436%2C516184..516297%2C515598..516083%2C515277..515513%2C514726..514818%2C514533..514648%2C514349..514451%2C513928..514022%2C513700..513847%2C513471..513602%2C513260..513388%2C513098..513176%2C512894..513003));owner=coffea | |
| 16071 chr1 manual_curation exon 30700433 30700542 . - . Parent=GSCOCT00028117001 | |
| 16072 chr1 manual_curation exon 30700637 30700715 . - . Parent=GSCOCT00028117001 | |
| 16073 chr1 manual_curation exon 30700799 30700927 . - . Parent=GSCOCT00028117001 | |
| 16074 chr1 manual_curation exon 30701010 30701141 . - . Parent=GSCOCT00028117001 | |
| 16075 chr1 manual_curation exon 30701239 30701386 . - . Parent=GSCOCT00028117001 | |
| 16076 chr1 manual_curation exon 30701467 30701561 . - . Parent=GSCOCT00028117001 | |
| 16077 chr1 manual_curation exon 30701888 30701990 . - . Parent=GSCOCT00028117001 | |
| 16078 chr1 manual_curation exon 30702072 30702187 . - . Parent=GSCOCT00028117001 | |
| 16079 chr1 manual_curation exon 30702265 30702357 . - . Parent=GSCOCT00028117001 | |
| 16080 chr1 manual_curation exon 30702816 30703052 . - . Parent=GSCOCT00028117001 | |
| 16081 chr1 manual_curation exon 30703137 30703622 . - . Parent=GSCOCT00028117001 | |
| 16082 chr1 manual_curation exon 30703723 30703836 . - . Parent=GSCOCT00028117001 | |
| 16083 chr1 manual_curation exon 30703927 30703975 . - . Parent=GSCOCT00028117001 | |
| 16084 chr1 manual_curation exon 30704076 30704241 . - . Parent=GSCOCT00028117001 | |
| 16085 chr1 manual_curation exon 30704342 30704717 . - . Parent=GSCOCT00028117001 | |
| 16086 chr1 manual_curation CDS 30700433 30700542 . - 1 Parent=GSCOCT00028117001 | |
| 16087 chr1 manual_curation CDS 30700637 30700715 . - 0 Parent=GSCOCT00028117001 | |
| 16088 chr1 manual_curation CDS 30700799 30700927 . - 0 Parent=GSCOCT00028117001 | |
| 16089 chr1 manual_curation CDS 30701010 30701141 . - 0 Parent=GSCOCT00028117001 | |
| 16090 chr1 manual_curation CDS 30701239 30701386 . - 2 Parent=GSCOCT00028117001 | |
| 16091 chr1 manual_curation CDS 30701467 30701561 . - 0 Parent=GSCOCT00028117001 | |
| 16092 chr1 manual_curation CDS 30701888 30701990 . - 2 Parent=GSCOCT00028117001 | |
| 16093 chr1 manual_curation CDS 30702072 30702187 . - 0 Parent=GSCOCT00028117001 | |
| 16094 chr1 manual_curation CDS 30702265 30702357 . - 0 Parent=GSCOCT00028117001 | |
| 16095 chr1 manual_curation CDS 30702816 30703052 . - 0 Parent=GSCOCT00028117001 | |
| 16096 chr1 manual_curation CDS 30703137 30703622 . - 0 Parent=GSCOCT00028117001 | |
| 16097 chr1 manual_curation CDS 30703723 30703836 . - 0 Parent=GSCOCT00028117001 | |
| 16098 chr1 manual_curation CDS 30703927 30703975 . - 2 Parent=GSCOCT00028117001 | |
| 16099 chr1 manual_curation CDS 30704076 30704241 . - 1 Parent=GSCOCT00028117001 | |
| 16100 chr1 manual_curation CDS 30704342 30704717 . - 0 Parent=GSCOCT00028117001 | |
| 16101 chr1 manual_curation gene 30707210 30712712 . + . ID=GSCOCG00028118001;Name=Cc01_g11990 | |
| 16102 chr1 manual_curation mRNA 30707210 30712712 . + . ID=GSCOCT00028118001;Parent=GSCOCG00028118001;Name=Cc01_g11990 | |
| 16103 chr1 manual_curation polypeptide 30707808 30711983 . + . ID=GSCOCP00028118001;Dbxref=SwissProt:Q6P4L9,SwissProt:Q6P4R8,SwissProt:Q6PIJ4,TAIR:AT1G02290.1,TAIR:AT3G45830.1,TAIR:AT5G13950.3,TrEMBL:B9GET9,TrEMBL:B9T3J5,TrEMBL:F6GTV8;Derives_from=GSCOCT00028118001;Name=Cc01_g11990;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:Nfrkb,CC_gene:NFRKB,CC_gene:nfrkb;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028118001~ Putative unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02290.1)%3B Has 499 Blast hits to 438 proteins in 100 species: Archae - 0%3B Bacteria - 7%3B Metazoa - 236%3B Fungi - 15%3B Plants - 108%3B Viruses - 2%3B Other Eukaryotes - 131 (source: NCBI BLink).~ Nfrkb~ complete;original_location=520269..524444;owner=coffea | |
| 16104 chr1 manual_curation exon 30712308 30712712 . + . Parent=GSCOCT00028118001 | |
| 16105 chr1 manual_curation exon 30707210 30712018 . + . Parent=GSCOCT00028118001 | |
| 16106 chr1 manual_curation CDS 30707808 30711983 . + 0 Parent=GSCOCT00028118001 | |
| 16107 chr1 manual_curation gene 30713832 30721561 . - . ID=GSCOCG00028119001;Name=Cc01_g12000 | |
| 16108 chr1 manual_curation mRNA 30713832 30721561 . - . ID=GSCOCT00028119001;Parent=GSCOCG00028119001;Name=Cc01_g12000 | |
| 16109 chr1 manual_curation polypeptide 30714207 30720897 . - . ID=GSCOCP00028119001;Dbxref=GENE3D:G3DSA:3.40.850.10,InterPro:IPR001752,InterPro:IPR019821,PFAM:PF00225,PRINTS:PR00380,PROFILE:PS50067,PROSITE:PS00411,SMART:SM00129,SwissProt:B2GU58,SwissProt:O23826,SwissProt:P82266,TAIR:AT2G28620.1,TAIR:AT2G37420.1,TAIR:AT3G45850.1,TrEMBL:B9T3J4,TrEMBL:D7SKP1,TrEMBL:Q94G20;Derives_from=GSCOCT00028119001;Name=Cc01_g12000;Ontology_term=CC_evidence_code:ISS,GO:0003777,GO:0005524,GO:0007018,CC_EC_number:missing_EC_number,PRODUCT:Putative 125 kDa kinesin-related protein,CC_functional_completeness:complete,CC_gene:TKRP125,CC_gene:At2g36200,CC_gene:kif11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028119001~ Putative 125 kDa kinesin-related protein~ TKRP125~ complete;original_location=complement(join(533174..533358%2C532951..533080%2C532521..532676%2C531933..532409%2C531626..531723%2C531381..531537%2C531171..531240%2C530930..531006%2C530790..530843%2C530621..530701%2C530414..530525%2C529670..529756%2C529395..529570%2C529153..529314%2C528965..529072%2C528695..528853%2C528515..528598%2C527677..527882%2C527467..527568%2C527274..527383%2C527017..527168%2C526668..526889));owner=coffea | |
| 16110 chr1 manual_curation exon 30721329 30721561 . - . Parent=GSCOCT00028119001 | |
| 16111 chr1 manual_curation exon 30713832 30714428 . - . Parent=GSCOCT00028119001 | |
| 16112 chr1 manual_curation exon 30714556 30714707 . - . Parent=GSCOCT00028119001 | |
| 16113 chr1 manual_curation exon 30714813 30714922 . - . Parent=GSCOCT00028119001 | |
| 16114 chr1 manual_curation exon 30715006 30715107 . - . Parent=GSCOCT00028119001 | |
| 16115 chr1 manual_curation exon 30715216 30715421 . - . Parent=GSCOCT00028119001 | |
| 16116 chr1 manual_curation exon 30716054 30716137 . - . Parent=GSCOCT00028119001 | |
| 16117 chr1 manual_curation exon 30716234 30716392 . - . Parent=GSCOCT00028119001 | |
| 16118 chr1 manual_curation exon 30716504 30716611 . - . Parent=GSCOCT00028119001 | |
| 16119 chr1 manual_curation exon 30716692 30716853 . - . Parent=GSCOCT00028119001 | |
| 16120 chr1 manual_curation exon 30716934 30717109 . - . Parent=GSCOCT00028119001 | |
| 16121 chr1 manual_curation exon 30717209 30717295 . - . Parent=GSCOCT00028119001 | |
| 16122 chr1 manual_curation exon 30717953 30718064 . - . Parent=GSCOCT00028119001 | |
| 16123 chr1 manual_curation exon 30718160 30718240 . - . Parent=GSCOCT00028119001 | |
| 16124 chr1 manual_curation exon 30718329 30718382 . - . Parent=GSCOCT00028119001 | |
| 16125 chr1 manual_curation exon 30718469 30718545 . - . Parent=GSCOCT00028119001 | |
| 16126 chr1 manual_curation exon 30718710 30718779 . - . Parent=GSCOCT00028119001 | |
| 16127 chr1 manual_curation exon 30718920 30719076 . - . Parent=GSCOCT00028119001 | |
| 16128 chr1 manual_curation exon 30719165 30719262 . - . Parent=GSCOCT00028119001 | |
| 16129 chr1 manual_curation exon 30719472 30719948 . - . Parent=GSCOCT00028119001 | |
| 16130 chr1 manual_curation exon 30720060 30720215 . - . Parent=GSCOCT00028119001 | |
| 16131 chr1 manual_curation exon 30720490 30720619 . - . Parent=GSCOCT00028119001 | |
| 16132 chr1 manual_curation exon 30720713 30720962 . - . Parent=GSCOCT00028119001 | |
| 16133 chr1 manual_curation CDS 30714207 30714428 . - 0 Parent=GSCOCT00028119001 | |
| 16134 chr1 manual_curation CDS 30714556 30714707 . - 1 Parent=GSCOCT00028119001 | |
| 16135 chr1 manual_curation CDS 30714813 30714922 . - 2 Parent=GSCOCT00028119001 | |
| 16136 chr1 manual_curation CDS 30715006 30715107 . - 2 Parent=GSCOCT00028119001 | |
| 16137 chr1 manual_curation CDS 30715216 30715421 . - 0 Parent=GSCOCT00028119001 | |
| 16138 chr1 manual_curation CDS 30716054 30716137 . - 0 Parent=GSCOCT00028119001 | |
| 16139 chr1 manual_curation CDS 30716234 30716392 . - 0 Parent=GSCOCT00028119001 | |
| 16140 chr1 manual_curation CDS 30716504 30716611 . - 0 Parent=GSCOCT00028119001 | |
| 16141 chr1 manual_curation CDS 30716692 30716853 . - 0 Parent=GSCOCT00028119001 | |
| 16142 chr1 manual_curation CDS 30716934 30717109 . - 1 Parent=GSCOCT00028119001 | |
| 16143 chr1 manual_curation CDS 30717209 30717295 . - 1 Parent=GSCOCT00028119001 | |
| 16144 chr1 manual_curation CDS 30717953 30718064 . - 0 Parent=GSCOCT00028119001 | |
| 16145 chr1 manual_curation CDS 30718160 30718240 . - 0 Parent=GSCOCT00028119001 | |
| 16146 chr1 manual_curation CDS 30718329 30718382 . - 0 Parent=GSCOCT00028119001 | |
| 16147 chr1 manual_curation CDS 30718469 30718545 . - 1 Parent=GSCOCT00028119001 | |
| 16148 chr1 manual_curation CDS 30718710 30718779 . - 0 Parent=GSCOCT00028119001 | |
| 16149 chr1 manual_curation CDS 30718920 30719076 . - 2 Parent=GSCOCT00028119001 | |
| 16150 chr1 manual_curation CDS 30719165 30719262 . - 0 Parent=GSCOCT00028119001 | |
| 16151 chr1 manual_curation CDS 30719472 30719948 . - 0 Parent=GSCOCT00028119001 | |
| 16152 chr1 manual_curation CDS 30720060 30720215 . - 0 Parent=GSCOCT00028119001 | |
| 16153 chr1 manual_curation CDS 30720490 30720619 . - 2 Parent=GSCOCT00028119001 | |
| 16154 chr1 manual_curation CDS 30720713 30720897 . - 0 Parent=GSCOCT00028119001 | |
| 16155 chr1 manual_curation gene 30730869 30731403 . + . ID=GSCOCG00028120001;Name=Cc01_g12010 | |
| 16156 chr1 manual_curation mRNA 30730869 30731403 . + . ID=GSCOCT00028120001;Parent=GSCOCG00028120001;Name=Cc01_g12010 | |
| 16157 chr1 manual_curation polypeptide 30730955 30731266 . + . ID=GSCOCP00028120001;Dbxref=GENE3D:G3DSA:1.10.20.10,InterPro:IPR001951,InterPro:IPR007125,InterPro:IPR009072,InterPro:IPR019809,PANTHER:PTHR10484,PFAM:PF00125,PRINTS:PR00623,PROSITE:PS00047,SMART:SM00417,SUPERFAMILY:SSF47113,SwissProt:P0CG89,SwissProt:P62788,SwissProt:Q76H85,TAIR:AT3G46320.1,TAIR:AT5G59690.1,TAIR:AT5G59970.1,TrEMBL:Q7XUC9;Derives_from=GSCOCT00028120001;Name=Cc01_g12010;Ontology_term=CC_evidence_code:ISS,GO:0000786,GO:0003677,GO:0005634,GO:0006334,CC_EC_number:missing_EC_number,PRODUCT:Histone H4,CC_functional_completeness:complete,CC_gene:SlH4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028120001~ Histone H4~ SlH4~ complete;original_location=543416..543727;owner=coffea | |
| 16158 chr1 manual_curation exon 30730869 30731403 . + . Parent=GSCOCT00028120001 | |
| 16159 chr1 manual_curation CDS 30730955 30731266 . + 0 Parent=GSCOCT00028120001 | |
| 16160 chr1 manual_curation gene 30734610 30735733 . + . ID=GSCOCG00028122001;Name=Cc01_g12020 | |
| 16161 chr1 manual_curation mRNA 30734610 30735733 . + . ID=GSCOCT00028122001;Parent=GSCOCG00028122001;Name=Cc01_g12020 | |
| 16162 chr1 manual_curation polypeptide 30734810 30735733 . + . ID=GSCOCP00028122001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR000677,InterPro:IPR001223,InterPro:IPR001579,InterPro:IPR013781,InterPro:IPR017853,PFAM:PF00704,PRINTS:PR00551,PROSITE:PS01095,SUPERFAMILY:SSF51445,SwissProt:P39657,SwissProt:Q7M443,SwissProt:Q9SLP4,TrEMBL:A5BD25,TrEMBL:B9T3J2,TrEMBL:F6GTV6;Derives_from=GSCOCT00028122001;Name=Cc01_g12020;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0043169,CC_EC_number:3.2.1.14,PRODUCT:Chitinase 2,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028122001~ Chitinase 2~ unknown_gene~ complete;original_location=547271..548194;owner=coffea | |
| 16163 chr1 manual_curation exon 30734610 30735733 . + . Parent=GSCOCT00028122001 | |
| 16164 chr1 manual_curation CDS 30734810 30735733 . + 0 Parent=GSCOCT00028122001 | |
| 16165 chr1 manual_curation gene 30744739 30747166 . + . ID=GSCOCG00028124001;Name=Cc01_g12030 | |
| 16166 chr1 manual_curation mRNA 30744739 30747166 . + . ID=GSCOCT00028124001;Parent=GSCOCG00028124001;Name=Cc01_g12030 | |
| 16167 chr1 manual_curation polypeptide 30745168 30746868 . + . ID=GSCOCP00028124001;Dbxref=InterPro:IPR010402,PFAM:PF06203,PROFILE:PS51017,TAIR:AT1G63820.1,TAIR:AT5G41380.1,TAIR:AT5G59990.1,TrEMBL:B9N6M0,TrEMBL:D7SKN8,TrEMBL:I1M4Q8;Derives_from=GSCOCT00028124001;Name=Cc01_g12030;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:CCT motif family protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028124001~ CCT motif family protein~ unknown_gene~ fragment;original_location=join(557629..557769%2C558604..558774%2C559147..559329);owner=coffea | |
| 16168 chr1 manual_curation exon 30744739 30745308 . + . Parent=GSCOCT00028124001 | |
| 16169 chr1 manual_curation exon 30746143 30746313 . + . Parent=GSCOCT00028124001 | |
| 16170 chr1 manual_curation exon 30746686 30747166 . + . Parent=GSCOCT00028124001 | |
| 16171 chr1 manual_curation CDS 30745168 30745308 . + 0 Parent=GSCOCT00028124001 | |
| 16172 chr1 manual_curation CDS 30746143 30746313 . + 0 Parent=GSCOCT00028124001 | |
| 16173 chr1 manual_curation CDS 30746686 30746868 . + 0 Parent=GSCOCT00028124001 | |
| 16174 chr1 manual_curation gene 30750481 30755276 . - . ID=GSCOCG00028125001;Name=Cc01_g12040 | |
| 16175 chr1 manual_curation mRNA 30750481 30755276 . - . ID=GSCOCT00028125001;Parent=GSCOCG00028125001;Name=Cc01_g12040 | |
| 16176 chr1 manual_curation polypeptide 30750731 30755116 . - . ID=GSCOCP00028125001;Dbxref=InterPro:IPR002738,InterPro:IPR016195,PANTHER:PTHR13031,PFAM:PF01876,SUPERFAMILY:SSF89550,SwissProt:O88796,SwissProt:P78346,SwissProt:Q3SZ21,TAIR:AT5G59980.2,TrEMBL:B9T3J0,TrEMBL:D7MT48,TrEMBL:D7SKN7;Derives_from=GSCOCT00028125001;Name=Cc01_g12040;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004540,GO:0008033,CC_EC_number:3.1.26.5,PRODUCT:Putative Ribonuclease P protein subunit p30,CC_functional_completeness:modules,CC_gene:RPP30,CC_gene:Rpp30;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028125001~ Putative Ribonuclease P protein subunit p30~ RPP30~ modules;original_location=complement(join(567146..567577%2C566851..566928%2C566173..566253%2C565357..565511%2C564108..565258%2C563192..563304));owner=coffea | |
| 16177 chr1 manual_curation exon 30750481 30750843 . - . Parent=GSCOCT00028125001 | |
| 16178 chr1 manual_curation exon 30751647 30752797 . - . Parent=GSCOCT00028125001 | |
| 16179 chr1 manual_curation exon 30752896 30753050 . - . Parent=GSCOCT00028125001 | |
| 16180 chr1 manual_curation exon 30753712 30753792 . - . Parent=GSCOCT00028125001 | |
| 16181 chr1 manual_curation exon 30754390 30754467 . - . Parent=GSCOCT00028125001 | |
| 16182 chr1 manual_curation exon 30754685 30755276 . - . Parent=GSCOCT00028125001 | |
| 16183 chr1 manual_curation CDS 30750731 30750843 . - 1 Parent=GSCOCT00028125001 | |
| 16184 chr1 manual_curation CDS 30751647 30752797 . - 2 Parent=GSCOCT00028125001 | |
| 16185 chr1 manual_curation CDS 30752896 30753050 . - 0 Parent=GSCOCT00028125001 | |
| 16186 chr1 manual_curation CDS 30753712 30753792 . - 0 Parent=GSCOCT00028125001 | |
| 16187 chr1 manual_curation CDS 30754390 30754467 . - 0 Parent=GSCOCT00028125001 | |
| 16188 chr1 manual_curation CDS 30754685 30755116 . - 0 Parent=GSCOCT00028125001 | |
| 16189 chr1 manual_curation gene 30760503 30761656 . + . ID=GSCOCG00028126001;Name=Cc01_g12050 | |
| 16190 chr1 manual_curation mRNA 30760503 30761656 . + . ID=GSCOCT00028126001;Parent=GSCOCG00028126001;Name=Cc01_g12050 | |
| 16191 chr1 manual_curation polypeptide 30761053 30761364 . + . ID=GSCOCP00028126001;Dbxref=GENE3D:G3DSA:1.10.20.10,InterPro:IPR001951,InterPro:IPR007125,InterPro:IPR009072,InterPro:IPR019809,PANTHER:PTHR10484,PFAM:PF00125,PROSITE:PS00047,SMART:SM00417,SUPERFAMILY:SSF47113,TrEMBL:B6T4M7;Derives_from=GSCOCT00028126001;Name=Cc01_g12050;Ontology_term=CC_evidence_code:ISS,GO:0000786,GO:0003677,GO:0005634,GO:0006334,CC_EC_number:missing_EC_number,PRODUCT:Histone H4,CC_functional_completeness:fragment,CC_gene:SlH4,CC_gene:H4C7,CC_gene:hh4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028126001~ Histone H4~ SlH4~ fragment;original_location=join(573514..573576%2C573649..573825);owner=coffea | |
| 16192 chr1 manual_curation exon 30760503 30760570 . + . Parent=GSCOCT00028126001 | |
| 16193 chr1 manual_curation exon 30761008 30761115 . + . Parent=GSCOCT00028126001 | |
| 16194 chr1 manual_curation exon 30761188 30761656 . + . Parent=GSCOCT00028126001 | |
| 16195 chr1 manual_curation CDS 30761053 30761115 . + 0 Parent=GSCOCT00028126001 | |
| 16196 chr1 manual_curation CDS 30761188 30761364 . + 0 Parent=GSCOCT00028126001 | |
| 16197 chr1 manual_curation gene 30762929 30769573 . - . ID=GSCOCG00028127001;Name=Cc01_g12060 | |
| 16198 chr1 manual_curation mRNA 30762929 30769573 . - . ID=GSCOCT00028127001;Parent=GSCOCG00028127001;Name=Cc01_g12060 | |
| 16199 chr1 manual_curation polypeptide 30763513 30768991 . - . ID=GSCOCP00028127001;Dbxref=InterPro:IPR001757,InterPro:IPR004014,InterPro:IPR005782,InterPro:IPR005834,InterPro:IPR006068,InterPro:IPR006069,InterPro:IPR008250,InterPro:IPR018303,PANTHER:PTHR11939,PFAM:PF00122,PFAM:PF00689,PFAM:PF00690,PFAM:PF00702,PRINTS:PR00119,PRINTS:PR00121,PROSITE:PS00154,SMART:SM00831,SwissProt:P92939,SwissProt:Q42883,SwissProt:Q9XES1,TAIR:AT1G07670.1,TAIR:AT1G07810.1,TAIR:AT4G00900.1,TIGRFAMs:TIGR01116,TIGRFAMs:TIGR01494,TrEMBL:A5C4X8,TrEMBL:B9HPP7,TrEMBL:F6GTV2;Derives_from=GSCOCT00028127001;Name=Cc01_g12060;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005388,GO:0005524,GO:0006754,GO:0006812,GO:0006816,GO:0008152,GO:0016020,GO:0016021,CC_EC_number:3.6.3.8,PRODUCT:Calcium-transporting ATPase 4%2C endoplasmic reticulum-type,CC_functional_completeness:complete,CC_gene:ECA4,CC_gene:ECA1,CC_gene:LCA1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028127001~ Calcium-transporting ATPase 4%2C endoplasmic reticulum-type~ ECA4~ complete;original_location=complement(join(580037..581452%2C579440..579512%2C579228..579352%2C578137..578418%2C577653..578030%2C577170..577279%2C576648..576876%2C575974..576549));owner=coffea | |
| 16200 chr1 manual_curation exon 30762929 30764088 . - . Parent=GSCOCT00028127001 | |
| 16201 chr1 manual_curation exon 30764187 30764415 . - . Parent=GSCOCT00028127001 | |
| 16202 chr1 manual_curation exon 30764709 30764818 . - . Parent=GSCOCT00028127001 | |
| 16203 chr1 manual_curation exon 30765192 30765569 . - . Parent=GSCOCT00028127001 | |
| 16204 chr1 manual_curation exon 30765676 30765957 . - . Parent=GSCOCT00028127001 | |
| 16205 chr1 manual_curation exon 30766767 30766891 . - . Parent=GSCOCT00028127001 | |
| 16206 chr1 manual_curation exon 30766979 30767051 . - . Parent=GSCOCT00028127001 | |
| 16207 chr1 manual_curation exon 30767576 30769573 . - . Parent=GSCOCT00028127001 | |
| 16208 chr1 manual_curation CDS 30763513 30764088 . - 0 Parent=GSCOCT00028127001 | |
| 16209 chr1 manual_curation CDS 30764187 30764415 . - 2 Parent=GSCOCT00028127001 | |
| 16210 chr1 manual_curation CDS 30764709 30764818 . - 0 Parent=GSCOCT00028127001 | |
| 16211 chr1 manual_curation CDS 30765192 30765569 . - 0 Parent=GSCOCT00028127001 | |
| 16212 chr1 manual_curation CDS 30765676 30765957 . - 0 Parent=GSCOCT00028127001 | |
| 16213 chr1 manual_curation CDS 30766767 30766891 . - 1 Parent=GSCOCT00028127001 | |
| 16214 chr1 manual_curation CDS 30766979 30767051 . - 0 Parent=GSCOCT00028127001 | |
| 16215 chr1 manual_curation CDS 30767576 30768991 . - 0 Parent=GSCOCT00028127001 | |
| 16216 chr1 manual_curation gene 30780374 30780970 . + . ID=GSCOCG00028128001;Name=Cc01_g12070 | |
| 16217 chr1 manual_curation mRNA 30780374 30780970 . + . ID=GSCOCT00028128001;Parent=GSCOCG00028128001;Name=Cc01_g12070 | |
| 16218 chr1 manual_curation polypeptide 30780479 30780970 . + . ID=GSCOCP00028128001;Dbxref=TAIR:AT3G46300.1,TAIR:AT3G46310.1,TAIR:AT5G02640.1,TrEMBL:B9HCB5,TrEMBL:F4YFD8,TrEMBL:F6GTV1;Derives_from=GSCOCT00028128001;Name=Cc01_g12070;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028128001~ Putative unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46300.1)%3B Has 37 Blast hits to 37 proteins in 10 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 37%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=592940..593431;owner=coffea | |
| 16219 chr1 manual_curation exon 30780374 30780970 . + . Parent=GSCOCT00028128001 | |
| 16220 chr1 manual_curation CDS 30780479 30780970 . + 0 Parent=GSCOCT00028128001 | |
| 16221 chr1 manual_curation gene 30786456 30789347 . - . ID=GSCOCG00028129001;Name=Cc01_g12080 | |
| 16222 chr1 manual_curation mRNA 30786456 30789347 . - . ID=GSCOCT00028129001;Parent=GSCOCG00028129001;Name=Cc01_g12080 | |
| 16223 chr1 manual_curation polypeptide 30786456 30788948 . - . ID=GSCOCP00028129001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR020635,InterPro:IPR021720,PFAM:PF07714,PFAM:PF11721,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q9FN92,SwissProt:Q9LK35,SwissProt:Q9LX66,TAIR:AT3G46290.1,TAIR:AT5G54380.1,TAIR:AT5G59700.1,TrEMBL:B9GET6,TrEMBL:B9HPN8,TrEMBL:F6GTV0;Derives_from=GSCOCT00028129001;Name=Cc01_g12080;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Receptor-like protein kinase HERK 1,CC_functional_completeness:complete,CC_gene:HERK1,CC_gene:At5g59700,CC_gene:THE1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028129001~ Receptor-like protein kinase HERK 1~ HERK1~ complete;original_location=complement(598917..601409);owner=coffea | |
| 16224 chr1 manual_curation exon 30786456 30789347 . - . Parent=GSCOCT00028129001 | |
| 16225 chr1 manual_curation CDS 30786456 30788948 . - 0 Parent=GSCOCT00028129001 | |
| 16226 chr1 manual_curation gene 30795883 30798770 . + . ID=GSCOCG00028131001;Name=Cc01_g12090 | |
| 16227 chr1 manual_curation mRNA 30795883 30798770 . + . ID=GSCOCT00028131001;Parent=GSCOCG00028131001;Name=Cc01_g12090 | |
| 16228 chr1 manual_curation polypeptide 30795883 30798770 . + . ID=GSCOCP00028131001;Dbxref=InterPro:IPR001611,PFAM:PF00560,SwissProt:O64556,SwissProt:O65924,SwissProt:O81069,TAIR:AT1G51790.1,TAIR:AT2G19210.1,TAIR:AT4G29990.1,TrEMBL:B9I843,TrEMBL:B9MZM8,TrEMBL:B9SW60;Derives_from=GSCOCT00028131001;Name=Cc01_g12090;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative leucine-rich repeat receptor-like protein kinase At2g19210,CC_functional_completeness:fragment,CC_gene:At2g19210,CC_gene:At2g19230,CC_gene:At2g28990;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028131001~ Putative leucine-rich repeat receptor-like protein kinase At2g19210~ At2g19210~ fragment;original_location=join(608344..608407%2C608536..609061%2C609282..609757%2C609853..609985%2C610130..610198%2C610323..610394%2C610519..610590%2C610716..610954%2C611062..611231);owner=coffea | |
| 16229 chr1 manual_curation exon 30795883 30795946 . + . Parent=GSCOCT00028131001 | |
| 16230 chr1 manual_curation exon 30796075 30796600 . + . Parent=GSCOCT00028131001 | |
| 16231 chr1 manual_curation exon 30796821 30797296 . + . Parent=GSCOCT00028131001 | |
| 16232 chr1 manual_curation exon 30797392 30797524 . + . Parent=GSCOCT00028131001 | |
| 16233 chr1 manual_curation exon 30797669 30797737 . + . Parent=GSCOCT00028131001 | |
| 16234 chr1 manual_curation exon 30797862 30797933 . + . Parent=GSCOCT00028131001 | |
| 16235 chr1 manual_curation exon 30798058 30798129 . + . Parent=GSCOCT00028131001 | |
| 16236 chr1 manual_curation exon 30798255 30798493 . + . Parent=GSCOCT00028131001 | |
| 16237 chr1 manual_curation exon 30798601 30798770 . + . Parent=GSCOCT00028131001 | |
| 16238 chr1 manual_curation CDS 30795883 30795946 . + 0 Parent=GSCOCT00028131001 | |
| 16239 chr1 manual_curation CDS 30796075 30796600 . + 1 Parent=GSCOCT00028131001 | |
| 16240 chr1 manual_curation CDS 30796821 30797296 . + 2 Parent=GSCOCT00028131001 | |
| 16241 chr1 manual_curation CDS 30797392 30797524 . + 1 Parent=GSCOCT00028131001 | |
| 16242 chr1 manual_curation CDS 30797669 30797737 . + 2 Parent=GSCOCT00028131001 | |
| 16243 chr1 manual_curation CDS 30797862 30797933 . + 2 Parent=GSCOCT00028131001 | |
| 16244 chr1 manual_curation CDS 30798058 30798129 . + 2 Parent=GSCOCT00028131001 | |
| 16245 chr1 manual_curation CDS 30798255 30798493 . + 2 Parent=GSCOCT00028131001 | |
| 16246 chr1 manual_curation CDS 30798601 30798770 . + 1 Parent=GSCOCT00028131001 | |
| 16247 chr1 manual_curation gene 30808657 30816618 . + . ID=GSCOCG00028132001;Name=Cc01_g12100 | |
| 16248 chr1 manual_curation mRNA 30808657 30816618 . + . ID=GSCOCT00028132001;Parent=GSCOCG00028132001;Name=Cc01_g12100 | |
| 16249 chr1 manual_curation polypeptide 30809877 30816560 . + . ID=GSCOCP00028132001;Dbxref=InterPro:IPR007282,PFAM:PF04153,SwissProt:Q52JK6,SwissProt:Q9FPW4,SwissProt:Q9NZN8,TAIR:AT1G07705.2,TAIR:AT5G59710.1,TrEMBL:F6GTU9,TrEMBL:I1LK89,TrEMBL:I1LR28;Derives_from=GSCOCT00028132001;Name=Cc01_g12100;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0030528,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Probable NOT transcription complex subunit VIP2 (Fragment),CC_functional_completeness:complete,CC_gene:VIP2,CC_gene:CNOT2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028132001~ Probable NOT transcription complex subunit VIP2 (Fragment)~ VIP2~ complete;original_location=join(622338..622355%2C623699..623807%2C623882..624060%2C624615..624996%2C625802..626011%2C626102..626197%2C627098..627186%2C627279..627461%2C627799..628224%2C628309..628361%2C628496..628537%2C628720..628864%2C628962..629021);owner=coffea | |
| 16250 chr1 manual_curation exon 30808657 30808799 . + . Parent=GSCOCT00028132001 | |
| 16251 chr1 manual_curation exon 30809759 30809894 . + . Parent=GSCOCT00028132001 | |
| 16252 chr1 manual_curation exon 30811238 30811346 . + . Parent=GSCOCT00028132001 | |
| 16253 chr1 manual_curation exon 30811421 30811599 . + . Parent=GSCOCT00028132001 | |
| 16254 chr1 manual_curation exon 30812154 30812535 . + . Parent=GSCOCT00028132001 | |
| 16255 chr1 manual_curation exon 30813341 30813550 . + . Parent=GSCOCT00028132001 | |
| 16256 chr1 manual_curation exon 30813641 30813736 . + . Parent=GSCOCT00028132001 | |
| 16257 chr1 manual_curation exon 30814637 30814725 . + . Parent=GSCOCT00028132001 | |
| 16258 chr1 manual_curation exon 30814818 30815000 . + . Parent=GSCOCT00028132001 | |
| 16259 chr1 manual_curation exon 30815338 30815763 . + . Parent=GSCOCT00028132001 | |
| 16260 chr1 manual_curation exon 30815848 30815900 . + . Parent=GSCOCT00028132001 | |
| 16261 chr1 manual_curation exon 30816035 30816076 . + . Parent=GSCOCT00028132001 | |
| 16262 chr1 manual_curation exon 30816259 30816403 . + . Parent=GSCOCT00028132001 | |
| 16263 chr1 manual_curation exon 30816501 30816618 . + . Parent=GSCOCT00028132001 | |
| 16264 chr1 manual_curation CDS 30809877 30809894 . + 0 Parent=GSCOCT00028132001 | |
| 16265 chr1 manual_curation CDS 30811238 30811346 . + 0 Parent=GSCOCT00028132001 | |
| 16266 chr1 manual_curation CDS 30811421 30811599 . + 1 Parent=GSCOCT00028132001 | |
| 16267 chr1 manual_curation CDS 30812154 30812535 . + 0 Parent=GSCOCT00028132001 | |
| 16268 chr1 manual_curation CDS 30813341 30813550 . + 1 Parent=GSCOCT00028132001 | |
| 16269 chr1 manual_curation CDS 30813641 30813736 . + 1 Parent=GSCOCT00028132001 | |
| 16270 chr1 manual_curation CDS 30814637 30814725 . + 1 Parent=GSCOCT00028132001 | |
| 16271 chr1 manual_curation CDS 30814818 30815000 . + 0 Parent=GSCOCT00028132001 | |
| 16272 chr1 manual_curation CDS 30815338 30815763 . + 0 Parent=GSCOCT00028132001 | |
| 16273 chr1 manual_curation CDS 30815848 30815900 . + 0 Parent=GSCOCT00028132001 | |
| 16274 chr1 manual_curation CDS 30816035 30816076 . + 2 Parent=GSCOCT00028132001 | |
| 16275 chr1 manual_curation CDS 30816259 30816403 . + 2 Parent=GSCOCT00028132001 | |
| 16276 chr1 manual_curation CDS 30816501 30816560 . + 0 Parent=GSCOCT00028132001 | |
| 16277 chr1 manual_curation gene 30816683 30826418 . - . ID=GSCOCG00028133001;Name=Cc01_g12110 | |
| 16278 chr1 manual_curation mRNA 30816683 30826418 . - . ID=GSCOCT00028133001;Parent=GSCOCG00028133001;Name=Cc01_g12110 | |
| 16279 chr1 manual_curation polypeptide 30817780 30826135 . - . ID=GSCOCP00028133001;Dbxref=InterPro:IPR018611,PFAM:PF09743,SwissProt:B8AXB6,SwissProt:B9FM64,SwissProt:Q9LX73,TAIR:AT3G46220.2,TrEMBL:B9T0R9,TrEMBL:D7SKM9,TrEMBL:F4J7Z6;Derives_from=GSCOCT00028133001;Name=Cc01_g12110;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:E3 UFM1-protein ligase 1 homolog,CC_functional_completeness:complete,CC_gene:At3g46220,CC_gene:Os05g0117600,CC_gene:OsI_18219;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028133001~ E3 UFM1-protein ligase 1 homolog~ At3g46220~ complete;original_location=complement(join(638423..638596%2C637560..637871%2C637207..637473%2C637047..637094%2C636585..636650%2C636345..636448%2C635086..635179%2C634942..634998%2C633853..634276%2C633608..633762%2C632996..633061%2C632844..632912%2C632658..632759%2C632484..632549%2C632072..632118%2C631921..631984%2C631251..631328%2C631077..631139%2C630538..630630%2C630241..630351));owner=coffea | |
| 16280 chr1 manual_curation exon 30816683 30817890 . - . Parent=GSCOCT00028133001 | |
| 16281 chr1 manual_curation exon 30818077 30818169 . - . Parent=GSCOCT00028133001 | |
| 16282 chr1 manual_curation exon 30818616 30818678 . - . Parent=GSCOCT00028133001 | |
| 16283 chr1 manual_curation exon 30818790 30818867 . - . Parent=GSCOCT00028133001 | |
| 16284 chr1 manual_curation exon 30819460 30819523 . - . Parent=GSCOCT00028133001 | |
| 16285 chr1 manual_curation exon 30819611 30819657 . - . Parent=GSCOCT00028133001 | |
| 16286 chr1 manual_curation exon 30820023 30820088 . - . Parent=GSCOCT00028133001 | |
| 16287 chr1 manual_curation exon 30820197 30820298 . - . Parent=GSCOCT00028133001 | |
| 16288 chr1 manual_curation exon 30820383 30820451 . - . Parent=GSCOCT00028133001 | |
| 16289 chr1 manual_curation exon 30820535 30820600 . - . Parent=GSCOCT00028133001 | |
| 16290 chr1 manual_curation exon 30821147 30821301 . - . Parent=GSCOCT00028133001 | |
| 16291 chr1 manual_curation exon 30821392 30821815 . - . Parent=GSCOCT00028133001 | |
| 16292 chr1 manual_curation exon 30822481 30822537 . - . Parent=GSCOCT00028133001 | |
| 16293 chr1 manual_curation exon 30822625 30822718 . - . Parent=GSCOCT00028133001 | |
| 16294 chr1 manual_curation exon 30823884 30823987 . - . Parent=GSCOCT00028133001 | |
| 16295 chr1 manual_curation exon 30824124 30824189 . - . Parent=GSCOCT00028133001 | |
| 16296 chr1 manual_curation exon 30824586 30824633 . - . Parent=GSCOCT00028133001 | |
| 16297 chr1 manual_curation exon 30824746 30825012 . - . Parent=GSCOCT00028133001 | |
| 16298 chr1 manual_curation exon 30825099 30825410 . - . Parent=GSCOCT00028133001 | |
| 16299 chr1 manual_curation exon 30825962 30826418 . - . Parent=GSCOCT00028133001 | |
| 16300 chr1 manual_curation CDS 30817780 30817890 . - 0 Parent=GSCOCT00028133001 | |
| 16301 chr1 manual_curation CDS 30818077 30818169 . - 0 Parent=GSCOCT00028133001 | |
| 16302 chr1 manual_curation CDS 30818616 30818678 . - 0 Parent=GSCOCT00028133001 | |
| 16303 chr1 manual_curation CDS 30818790 30818867 . - 0 Parent=GSCOCT00028133001 | |
| 16304 chr1 manual_curation CDS 30819460 30819523 . - 2 Parent=GSCOCT00028133001 | |
| 16305 chr1 manual_curation CDS 30819611 30819657 . - 0 Parent=GSCOCT00028133001 | |
| 16306 chr1 manual_curation CDS 30820023 30820088 . - 0 Parent=GSCOCT00028133001 | |
| 16307 chr1 manual_curation CDS 30820197 30820298 . - 0 Parent=GSCOCT00028133001 | |
| 16308 chr1 manual_curation CDS 30820383 30820451 . - 0 Parent=GSCOCT00028133001 | |
| 16309 chr1 manual_curation CDS 30820535 30820600 . - 0 Parent=GSCOCT00028133001 | |
| 16310 chr1 manual_curation CDS 30821147 30821301 . - 1 Parent=GSCOCT00028133001 | |
| 16311 chr1 manual_curation CDS 30821392 30821815 . - 0 Parent=GSCOCT00028133001 | |
| 16312 chr1 manual_curation CDS 30822481 30822537 . - 0 Parent=GSCOCT00028133001 | |
| 16313 chr1 manual_curation CDS 30822625 30822718 . - 2 Parent=GSCOCT00028133001 | |
| 16314 chr1 manual_curation CDS 30823884 30823987 . - 0 Parent=GSCOCT00028133001 | |
| 16315 chr1 manual_curation CDS 30824124 30824189 . - 0 Parent=GSCOCT00028133001 | |
| 16316 chr1 manual_curation CDS 30824586 30824633 . - 0 Parent=GSCOCT00028133001 | |
| 16317 chr1 manual_curation CDS 30824746 30825012 . - 0 Parent=GSCOCT00028133001 | |
| 16318 chr1 manual_curation CDS 30825099 30825410 . - 0 Parent=GSCOCT00028133001 | |
| 16319 chr1 manual_curation CDS 30825962 30826135 . - 0 Parent=GSCOCT00028133001 | |
| 16320 chr1 manual_curation gene 30826783 30829382 . - . ID=GSCOCG00028134001;Name=Cc01_g12120 | |
| 16321 chr1 manual_curation mRNA 30826783 30829382 . - . ID=GSCOCT00028134001;Parent=GSCOCG00028134001;Name=Cc01_g12120 | |
| 16322 chr1 manual_curation polypeptide 30827228 30829382 . - . ID=GSCOCP00028134001;Dbxref=GENE3D:G3DSA:1.25.40.20,InterPro:IPR002110,InterPro:IPR020683,PFAM:PF00023,PROFILE:PS50088,PROFILE:PS50297,SMART:SM00248,SUPERFAMILY:SSF48403,SwissProt:Q6AWW5,SwissProt:Q9C7A2,SwissProt:Q9ZU96,TAIR:AT1G07710.1,TAIR:AT5G02620.1,TAIR:AT5G60070.1,TrEMBL:G7IUA5,TrEMBL:I1M4R3,TrEMBL:I1MDK5;Derives_from=GSCOCT00028134001;Name=Cc01_g12120;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Ankyrin repeat-containing protein At5g02620,CC_functional_completeness:complete,CC_gene:At5g02620,CC_gene:At3g12360,CC_gene:At2g01680;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028134001~ Ankyrin repeat-containing protein At5g02620~ At5g02620~ complete;original_location=complement(join(641507..641843%2C641014..641423%2C639689..640567));owner=coffea | |
| 16323 chr1 manual_curation exon 30826783 30828106 . - . Parent=GSCOCT00028134001 | |
| 16324 chr1 manual_curation exon 30828553 30828962 . - . Parent=GSCOCT00028134001 | |
| 16325 chr1 manual_curation exon 30829046 30829382 . - . Parent=GSCOCT00028134001 | |
| 16326 chr1 manual_curation CDS 30827228 30828106 . - 0 Parent=GSCOCT00028134001 | |
| 16327 chr1 manual_curation CDS 30828553 30828962 . - 1 Parent=GSCOCT00028134001 | |
| 16328 chr1 manual_curation CDS 30829046 30829382 . - 0 Parent=GSCOCT00028134001 | |
| 16329 chr1 manual_curation gene 30829535 30830142 . - . ID=GSCOCG00028135001;Name=Cc01_g12130 | |
| 16330 chr1 manual_curation mRNA 30829535 30830142 . - . ID=GSCOCT00028135001;Parent=GSCOCG00028135001;Name=Cc01_g12130 | |
| 16331 chr1 manual_curation polypeptide 30829535 30829963 . - . ID=GSCOCP00028135001;Derives_from=GSCOCT00028135001;Name=Cc01_g12130;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028135001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(642386..642424%2C641996..642079));owner=coffea | |
| 16332 chr1 manual_curation exon 30829535 30829618 . - . Parent=GSCOCT00028135001 | |
| 16333 chr1 manual_curation exon 30829925 30830142 . - . Parent=GSCOCT00028135001 | |
| 16334 chr1 manual_curation CDS 30829535 30829618 . - 0 Parent=GSCOCT00028135001 | |
| 16335 chr1 manual_curation CDS 30829925 30829963 . - 0 Parent=GSCOCT00028135001 | |
| 16336 chr1 manual_curation gene 30838480 30843603 . - . ID=GSCOCG00028137001;Name=Cc01_g12140 | |
| 16337 chr1 manual_curation mRNA 30838480 30843603 . - . ID=GSCOCT00028137001;Parent=GSCOCG00028137001;Name=Cc01_g12140 | |
| 16338 chr1 manual_curation polypeptide 30838777 30843441 . - . ID=GSCOCP00028137001;Dbxref=GENE3D:G3DSA:3.90.79.10,InterPro:IPR000086,InterPro:IPR015797,PFAM:PF00293,SUPERFAMILY:SSF55811,SwissProt:Q2TBI8,SwissProt:Q6P9U1,SwissProt:Q8VYR2,TAIR:AT3G46200.1,TrEMBL:B9HPN7,TrEMBL:C6TBR4,TrEMBL:D7SKM7;Derives_from=GSCOCT00028137001;Name=Cc01_g12140;Ontology_term=CC_evidence_code:ISS,GO:0016787,CC_EC_number:missing_EC_number,PRODUCT:Nudix hydrolase 9,CC_functional_completeness:complete,CC_gene:NUDT9,CC_gene:Nudt22,CC_gene:NUDT22;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028137001~ Nudix hydrolase 9~ NUDT9~ complete;original_location=complement(join(655828..655902%2C655653..655727%2C655441..655497%2C654542..654624%2C654045..654103%2C653176..653324%2C652889..653029%2C651963..652121%2C651238..651333));owner=coffea | |
| 16339 chr1 manual_curation exon 30838480 30838872 . - . Parent=GSCOCT00028137001 | |
| 16340 chr1 manual_curation exon 30839502 30839660 . - . Parent=GSCOCT00028137001 | |
| 16341 chr1 manual_curation exon 30840428 30840568 . - . Parent=GSCOCT00028137001 | |
| 16342 chr1 manual_curation exon 30840715 30840863 . - . Parent=GSCOCT00028137001 | |
| 16343 chr1 manual_curation exon 30841584 30841642 . - . Parent=GSCOCT00028137001 | |
| 16344 chr1 manual_curation exon 30842081 30842163 . - . Parent=GSCOCT00028137001 | |
| 16345 chr1 manual_curation exon 30842980 30843036 . - . Parent=GSCOCT00028137001 | |
| 16346 chr1 manual_curation exon 30843192 30843266 . - . Parent=GSCOCT00028137001 | |
| 16347 chr1 manual_curation exon 30843367 30843603 . - . Parent=GSCOCT00028137001 | |
| 16348 chr1 manual_curation CDS 30838777 30838872 . - 0 Parent=GSCOCT00028137001 | |
| 16349 chr1 manual_curation CDS 30839502 30839660 . - 0 Parent=GSCOCT00028137001 | |
| 16350 chr1 manual_curation CDS 30840428 30840568 . - 0 Parent=GSCOCT00028137001 | |
| 16351 chr1 manual_curation CDS 30840715 30840863 . - 1 Parent=GSCOCT00028137001 | |
| 16352 chr1 manual_curation CDS 30841584 30841642 . - 2 Parent=GSCOCT00028137001 | |
| 16353 chr1 manual_curation CDS 30842081 30842163 . - 0 Parent=GSCOCT00028137001 | |
| 16354 chr1 manual_curation CDS 30842980 30843036 . - 0 Parent=GSCOCT00028137001 | |
| 16355 chr1 manual_curation CDS 30843192 30843266 . - 0 Parent=GSCOCT00028137001 | |
| 16356 chr1 manual_curation CDS 30843367 30843441 . - 0 Parent=GSCOCT00028137001 | |
| 16357 chr1 manual_curation gene 30847847 30849256 . - . ID=GSCOCG00028139001;Name=Cc01_g12150 | |
| 16358 chr1 manual_curation mRNA 30847847 30849256 . - . ID=GSCOCT00028139001;Parent=GSCOCG00028139001;Name=Cc01_g12150 | |
| 16359 chr1 manual_curation polypeptide 30847847 30849256 . - . ID=GSCOCP00028139001;Dbxref=GENE3D:G3DSA:3.40.47.10,InterPro:IPR012392,InterPro:IPR013601,InterPro:IPR013747,InterPro:IPR016038,InterPro:IPR016039,PFAM:PF08392,PFAM:PF08541,PIR:PIRSF036417,SUPERFAMILY:SSF53901,SwissProt:Q9LQP8,SwissProt:Q9LZ72,SwissProt:Q9SIB2,TAIR:AT1G07720.1,TAIR:AT2G28630.1,TAIR:AT5G04530.1,TrEMBL:B9GET3,TrEMBL:B9HPL4,TrEMBL:B9T7E3;Derives_from=GSCOCT00028139001;Name=Cc01_g12150;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0006633,GO:0008152,GO:0008610,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:3-ketoacyl-CoA synthase 12,CC_functional_completeness:complete,CC_gene:KCS12,CC_gene:KCS3,CC_gene:KCS21;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028139001~ 3-ketoacyl-CoA synthase 12~ KCS12~ complete;original_location=complement(660308..661717);owner=coffea | |
| 16360 chr1 manual_curation exon 30847847 30849256 . - . Parent=GSCOCT00028139001 | |
| 16361 chr1 manual_curation CDS 30847847 30849256 . - 0 Parent=GSCOCT00028139001 | |
| 16362 chr1 manual_curation gene 30853376 30855334 . - . ID=GSCOCG00028141001;Name=Cc01_g12160 | |
| 16363 chr1 manual_curation mRNA 30853376 30855334 . - . ID=GSCOCT00028141001;Parent=GSCOCG00028141001;Name=Cc01_g12160 | |
| 16364 chr1 manual_curation polypeptide 30853376 30855334 . - . ID=GSCOCP00028141001;Dbxref=InterPro:IPR004140,PANTHER:PTHR12542,PFAM:PF03081,TAIR:AT2G39380.1,TAIR:AT3G09520.1,TAIR:AT5G59730.1,TrEMBL:A5AIG4,TrEMBL:B9T911,TrEMBL:F6GTU7;Derives_from=GSCOCT00028141001;Name=Cc01_g12160;Ontology_term=CC_evidence_code:ISS,GO:0000145,GO:0006887,CC_EC_number:missing_EC_number,PRODUCT:Putative exocyst subunit exo70 family protein H7,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028141001~ Putative exocyst subunit exo70 family protein H7~ unknown_gene~ complete;original_location=complement(665837..667795);owner=coffea | |
| 16365 chr1 manual_curation exon 30853376 30855334 . - . Parent=GSCOCT00028141001 | |
| 16366 chr1 manual_curation CDS 30853376 30855334 . - 0 Parent=GSCOCT00028141001 | |
| 16367 chr1 manual_curation gene 30859848 30862505 . - . ID=GSCOCG00028143001;Name=Cc01_g12170 | |
| 16368 chr1 manual_curation mRNA 30859848 30862505 . - . ID=GSCOCT00028143001;Parent=GSCOCG00028143001;Name=Cc01_g12170 | |
| 16369 chr1 manual_curation polypeptide 30860148 30862505 . - . ID=GSCOCP00028143001;Dbxref=GENE3D:G3DSA:1.10.287.310,InterPro:IPR001854,PFAM:PF00831,SUPERFAMILY:SSF46561,SwissProt:O80626,SwissProt:Q9SF53,TAIR:AT2G39390.1,TAIR:AT3G09500.1,TAIR:AT3G55170.1,TIGRFAMs:TIGR00012,TrEMBL:A9PCH3,TrEMBL:F4YF94;Derives_from=GSCOCT00028143001;Name=Cc01_g12170;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:60S ribosomal protein L35-2,CC_functional_completeness:complete,CC_gene:RPL35,CC_gene:RPL35B,CC_gene:RPL35A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028143001~ 60S ribosomal protein L35-2~ RPL35~ complete;original_location=complement(join(674927..674966%2C674499..674519%2C674232..674367%2C673963..674119%2C672609..672683));owner=coffea | |
| 16370 chr1 manual_curation exon 30859848 30860222 . - . Parent=GSCOCT00028143001 | |
| 16371 chr1 manual_curation exon 30861502 30861658 . - . Parent=GSCOCT00028143001 | |
| 16372 chr1 manual_curation exon 30861771 30861906 . - . Parent=GSCOCT00028143001 | |
| 16373 chr1 manual_curation exon 30862038 30862058 . - . Parent=GSCOCT00028143001 | |
| 16374 chr1 manual_curation exon 30862466 30862505 . - . Parent=GSCOCT00028143001 | |
| 16375 chr1 manual_curation CDS 30860148 30860222 . - 0 Parent=GSCOCT00028143001 | |
| 16376 chr1 manual_curation CDS 30861502 30861658 . - 2 Parent=GSCOCT00028143001 | |
| 16377 chr1 manual_curation CDS 30861771 30861906 . - 1 Parent=GSCOCT00028143001 | |
| 16378 chr1 manual_curation CDS 30862038 30862058 . - 1 Parent=GSCOCT00028143001 | |
| 16379 chr1 manual_curation CDS 30862466 30862505 . - 0 Parent=GSCOCT00028143001 | |
| 16380 chr1 manual_curation gene 30867621 30869281 . + . ID=GSCOCG00028144001;Name=Cc01_g12180 | |
| 16381 chr1 manual_curation mRNA 30867621 30869281 . + . ID=GSCOCT00028144001;Parent=GSCOCG00028144001;Name=Cc01_g12180 | |
| 16382 chr1 manual_curation polypeptide 30867621 30869039 . + . ID=GSCOCP00028144001;Dbxref=InterPro:IPR006121,PFAM:PF00403,PROFILE:PS50846,SUPERFAMILY:SSF55008,TAIR:AT2G28660.1,TAIR:AT2G37390.1,TAIR:AT5G02600.2,TrEMBL:A5ARD5,TrEMBL:B9SYN0,TrEMBL:D7SKM3;Derives_from=GSCOCT00028144001;Name=Cc01_g12180;Ontology_term=CC_evidence_code:ISS,GO:0030001,GO:0046872,CC_EC_number:missing_EC_number,PRODUCT:Chloroplast-targeted copper chaperone%2C putative,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028144001~ Chloroplast-targeted copper chaperone%2C putative~ unknown_gene~ complete;original_location=join(680082..680858%2C681002..681077%2C681322..681500);owner=coffea | |
| 16383 chr1 manual_curation exon 30867621 30868397 . + . Parent=GSCOCT00028144001 | |
| 16384 chr1 manual_curation exon 30868541 30868616 . + . Parent=GSCOCT00028144001 | |
| 16385 chr1 manual_curation exon 30868861 30869281 . + . Parent=GSCOCT00028144001 | |
| 16386 chr1 manual_curation CDS 30867621 30868397 . + 0 Parent=GSCOCT00028144001 | |
| 16387 chr1 manual_curation CDS 30868541 30868616 . + 0 Parent=GSCOCT00028144001 | |
| 16388 chr1 manual_curation CDS 30868861 30869039 . + 1 Parent=GSCOCT00028144001 | |
| 16389 chr1 manual_curation gene 30879790 30882871 . - . ID=GSCOCG00028146001;Name=Cc01_g12190 | |
| 16390 chr1 manual_curation mRNA 30879790 30882871 . - . ID=GSCOCT00028146001;Parent=GSCOCG00028146001;Name=Cc01_g12190 | |
| 16391 chr1 manual_curation polypeptide 30879790 30882871 . - . ID=GSCOCP00028146001;Dbxref=InterPro:IPR002885,InterPro:IPR004265,PFAM:PF01535,PFAM:PF03018,PROFILE:PS51375,SwissProt:Q3E9F0,SwissProt:Q9FFE3,SwissProt:Q9LQQ1,TAIR:AT1G07730.2,TAIR:AT1G07740.1,TAIR:AT5G16420.1,TIGRFAMs:TIGR00756,TrEMBL:A5ARD8,TrEMBL:B9SYN1,TrEMBL:F6GTU5;Derives_from=GSCOCT00028146001;Name=Cc01_g12190;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Pentatricopeptide repeat-containing protein At1g07740%2C mitochondrial,CC_functional_completeness:complete,CC_gene:At1g07740,CC_gene:At5g16420,CC_gene:At5g18475;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028146001~ Putative Pentatricopeptide repeat-containing protein At1g07740%2C mitochondrial~ At1g07740~ complete;original_location=complement(join(693956..695332%2C692470..693066%2C692251..692349));owner=coffea | |
| 16392 chr1 manual_curation exon 30879790 30879888 . - . Parent=GSCOCT00028146001 | |
| 16393 chr1 manual_curation exon 30880009 30880605 . - . Parent=GSCOCT00028146001 | |
| 16394 chr1 manual_curation exon 30881495 30882871 . - . Parent=GSCOCT00028146001 | |
| 16395 chr1 manual_curation CDS 30879790 30879888 . - 0 Parent=GSCOCT00028146001 | |
| 16396 chr1 manual_curation CDS 30880009 30880605 . - 0 Parent=GSCOCT00028146001 | |
| 16397 chr1 manual_curation CDS 30881495 30882871 . - 0 Parent=GSCOCT00028146001 | |
| 16398 chr1 manual_curation gene 30887501 30890324 . - . ID=GSCOCG00028147001;Name=Cc01_g12200 | |
| 16399 chr1 manual_curation mRNA 30887501 30890324 . - . ID=GSCOCT00028147001;Parent=GSCOCG00028147001;Name=Cc01_g12200 | |
| 16400 chr1 manual_curation polypeptide 30887662 30890137 . - . ID=GSCOCP00028147001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:P93149,SwissProt:Q42798,SwissProt:Q42799,TAIR:AT2G42250.1,TAIR:AT3G20950.1,TAIR:AT5G06900.1,TrEMBL:A4F1U2,TrEMBL:Q59I67,TrEMBL:Q9SSX4;Derives_from=GSCOCT00028147001;Name=Cc01_g12200;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.87,PRODUCT:Licodione synthase,CC_functional_completeness:complete,CC_gene:CYP93B1,CC_gene:CYP93A1,CC_gene:CYP93A2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028147001~ Licodione synthase~ CYP93B1~ complete;original_location=complement(join(701678..702598%2C700123..700815));owner=coffea | |
| 16401 chr1 manual_curation exon 30887501 30888354 . - . Parent=GSCOCT00028147001 | |
| 16402 chr1 manual_curation exon 30889217 30890324 . - . Parent=GSCOCT00028147001 | |
| 16403 chr1 manual_curation CDS 30887662 30888354 . - 0 Parent=GSCOCT00028147001 | |
| 16404 chr1 manual_curation CDS 30889217 30890137 . - 0 Parent=GSCOCT00028147001 | |
| 16405 chr1 manual_curation gene 30893980 30898523 . - . ID=GSCOCG00028149001;Name=Cc01_g12210 | |
| 16406 chr1 manual_curation mRNA 30893980 30898523 . - . ID=GSCOCT00028149001;Parent=GSCOCG00028149001;Name=Cc01_g12210 | |
| 16407 chr1 manual_curation polypeptide 30894165 30898483 . - . ID=GSCOCP00028149001;Dbxref=InterPro:IPR003593,InterPro:IPR013632,InterPro:IPR020588,PFAM:PF08423,PROFILE:PS50162,SMART:SM00382,SwissProt:O55230,SwissProt:O75771,SwissProt:Q9LQQ2,TAIR:AT1G07745.1,TAIR:AT3G22880.1,TrEMBL:A5ARD8,TrEMBL:F6GTU5,TrEMBL:I1LK75;Derives_from=GSCOCT00028149001;Name=Cc01_g12210;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003677,GO:0005524,GO:0006259,GO:0008094,GO:0017111,CC_EC_number:missing_EC_number,PRODUCT:DNA repair protein RAD51 homolog 4,CC_functional_completeness:complete,CC_gene:RAD51D,CC_gene:Rad51d;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028149001~ DNA repair protein RAD51 homolog 4~ RAD51D~ complete;original_location=complement(join(710857..710944%2C710234..710313%2C710022..710137%2C709861..709942%2C709590..709724%2C708870..708980%2C708659..708740%2C708022..708092%2C706909..707058%2C706626..706661));owner=coffea | |
| 16408 chr1 manual_curation exon 30893980 30894200 . - . Parent=GSCOCT00028149001 | |
| 16409 chr1 manual_curation exon 30894448 30894597 . - . Parent=GSCOCT00028149001 | |
| 16410 chr1 manual_curation exon 30895561 30895631 . - . Parent=GSCOCT00028149001 | |
| 16411 chr1 manual_curation exon 30896198 30896279 . - . Parent=GSCOCT00028149001 | |
| 16412 chr1 manual_curation exon 30896409 30896519 . - . Parent=GSCOCT00028149001 | |
| 16413 chr1 manual_curation exon 30897129 30897263 . - . Parent=GSCOCT00028149001 | |
| 16414 chr1 manual_curation exon 30897400 30897481 . - . Parent=GSCOCT00028149001 | |
| 16415 chr1 manual_curation exon 30897561 30897676 . - . Parent=GSCOCT00028149001 | |
| 16416 chr1 manual_curation exon 30897773 30897852 . - . Parent=GSCOCT00028149001 | |
| 16417 chr1 manual_curation exon 30898396 30898523 . - . Parent=GSCOCT00028149001 | |
| 16418 chr1 manual_curation CDS 30894165 30894200 . - 0 Parent=GSCOCT00028149001 | |
| 16419 chr1 manual_curation CDS 30894448 30894597 . - 0 Parent=GSCOCT00028149001 | |
| 16420 chr1 manual_curation CDS 30895561 30895631 . - 1 Parent=GSCOCT00028149001 | |
| 16421 chr1 manual_curation CDS 30896198 30896279 . - 0 Parent=GSCOCT00028149001 | |
| 16422 chr1 manual_curation CDS 30896409 30896519 . - 0 Parent=GSCOCT00028149001 | |
| 16423 chr1 manual_curation CDS 30897129 30897263 . - 0 Parent=GSCOCT00028149001 | |
| 16424 chr1 manual_curation CDS 30897400 30897481 . - 2 Parent=GSCOCT00028149001 | |
| 16425 chr1 manual_curation CDS 30897561 30897676 . - 0 Parent=GSCOCT00028149001 | |
| 16426 chr1 manual_curation CDS 30897773 30897852 . - 1 Parent=GSCOCT00028149001 | |
| 16427 chr1 manual_curation CDS 30898396 30898483 . - 0 Parent=GSCOCT00028149001 | |
| 16428 chr1 manual_curation gene 30899273 30900867 . - . ID=GSCOCG00028150001;Name=Cc01_g12220 | |
| 16429 chr1 manual_curation mRNA 30899273 30900867 . - . ID=GSCOCT00028150001;Parent=GSCOCG00028150001;Name=Cc01_g12220 | |
| 16430 chr1 manual_curation polypeptide 30899273 30900800 . - . ID=GSCOCP00028150001;Dbxref=GENE3D:G3DSA:2.60.120.10,InterPro:IPR006044,InterPro:IPR006045,InterPro:IPR011051,InterPro:IPR014710,PFAM:PF00190,PRINTS:PR00439,SMART:SM00835,SUPERFAMILY:SSF51182,SwissProt:P07728,SwissProt:P07730,SwissProt:Q09151,TAIR:AT1G03890.1,TAIR:AT1G07750.1,TAIR:AT2G28680.1,TrEMBL:B9SYN7,TrEMBL:D7KHV5,TrEMBL:Q8LA49;Derives_from=GSCOCT00028150001;Name=Cc01_g12220;Ontology_term=CC_evidence_code:ISS,GO:0045735,CC_EC_number:missing_EC_number,PRODUCT:Putative Glutelin type-A 1,CC_functional_completeness:complete,CC_gene:GLUA1,CC_gene:GLUA2,CC_gene:GLUA3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028150001~ Putative Glutelin type-A 1~ GLUA1~ complete;original_location=complement(join(713066..713261%2C711987..712707%2C711734..711884));owner=coffea | |
| 16431 chr1 manual_curation exon 30899273 30899423 . - . Parent=GSCOCT00028150001 | |
| 16432 chr1 manual_curation exon 30899526 30900246 . - . Parent=GSCOCT00028150001 | |
| 16433 chr1 manual_curation exon 30900605 30900867 . - . Parent=GSCOCT00028150001 | |
| 16434 chr1 manual_curation CDS 30899273 30899423 . - 2 Parent=GSCOCT00028150001 | |
| 16435 chr1 manual_curation CDS 30899526 30900246 . - 1 Parent=GSCOCT00028150001 | |
| 16436 chr1 manual_curation CDS 30900605 30900800 . - 0 Parent=GSCOCT00028150001 | |
| 16437 chr1 manual_curation gene 30904417 30912182 . - . ID=GSCOCG00028152001;Name=Cc01_g12230 | |
| 16438 chr1 manual_curation mRNA 30904417 30912182 . - . ID=GSCOCT00028152001;Parent=GSCOCG00028152001;Name=Cc01_g12230 | |
| 16439 chr1 manual_curation polypeptide 30904935 30911840 . - . ID=GSCOCP00028152001;Dbxref=InterPro:IPR013657,PFAM:PF08449,SwissProt:Q55DM5,SwissProt:Q6NM25,SwissProt:Q6NMB6,TAIR:AT2G02810.1,TAIR:AT3G46180.1,TAIR:AT5G59740.1,TrEMBL:B9SYN9,TrEMBL:D7MSH9,TrEMBL:D7SKL9;Derives_from=GSCOCT00028152001;Name=Cc01_g12230;Ontology_term=CC_evidence_code:ISS,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:UDP-galactose/UDP-glucose transporter 5B,CC_functional_completeness:complete,CC_gene:At5g59740,CC_gene:UTR5,CC_gene:slc35b2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028152001~ UDP-galactose/UDP-glucose transporter 5B~ At5g59740~ complete;original_location=complement(join(724185..724301%2C723347..723460%2C722949..723041%2C722711..722776%2C721942..722040%2C721026..721105%2C719611..719723%2C718557..718645%2C717815..717901%2C717595..717663%2C717396..717509));owner=coffea | |
| 16440 chr1 manual_curation exon 30911962 30912182 . - . Parent=GSCOCT00028152001 | |
| 16441 chr1 manual_curation exon 30904417 30905048 . - . Parent=GSCOCT00028152001 | |
| 16442 chr1 manual_curation exon 30905134 30905202 . - . Parent=GSCOCT00028152001 | |
| 16443 chr1 manual_curation exon 30905354 30905440 . - . Parent=GSCOCT00028152001 | |
| 16444 chr1 manual_curation exon 30906096 30906184 . - . Parent=GSCOCT00028152001 | |
| 16445 chr1 manual_curation exon 30907150 30907262 . - . Parent=GSCOCT00028152001 | |
| 16446 chr1 manual_curation exon 30908565 30908644 . - . Parent=GSCOCT00028152001 | |
| 16447 chr1 manual_curation exon 30909481 30909579 . - . Parent=GSCOCT00028152001 | |
| 16448 chr1 manual_curation exon 30910250 30910315 . - . Parent=GSCOCT00028152001 | |
| 16449 chr1 manual_curation exon 30910488 30910580 . - . Parent=GSCOCT00028152001 | |
| 16450 chr1 manual_curation exon 30910886 30910999 . - . Parent=GSCOCT00028152001 | |
| 16451 chr1 manual_curation exon 30911724 30911866 . - . Parent=GSCOCT00028152001 | |
| 16452 chr1 manual_curation CDS 30904935 30905048 . - 0 Parent=GSCOCT00028152001 | |
| 16453 chr1 manual_curation CDS 30905134 30905202 . - 0 Parent=GSCOCT00028152001 | |
| 16454 chr1 manual_curation CDS 30905354 30905440 . - 0 Parent=GSCOCT00028152001 | |
| 16455 chr1 manual_curation CDS 30906096 30906184 . - 1 Parent=GSCOCT00028152001 | |
| 16456 chr1 manual_curation CDS 30907150 30907262 . - 2 Parent=GSCOCT00028152001 | |
| 16457 chr1 manual_curation CDS 30908565 30908644 . - 0 Parent=GSCOCT00028152001 | |
| 16458 chr1 manual_curation CDS 30909481 30909579 . - 0 Parent=GSCOCT00028152001 | |
| 16459 chr1 manual_curation CDS 30910250 30910315 . - 0 Parent=GSCOCT00028152001 | |
| 16460 chr1 manual_curation CDS 30910488 30910580 . - 0 Parent=GSCOCT00028152001 | |
| 16461 chr1 manual_curation CDS 30910886 30910999 . - 0 Parent=GSCOCT00028152001 | |
| 16462 chr1 manual_curation CDS 30911724 30911840 . - 0 Parent=GSCOCT00028152001 | |
| 16463 chr1 manual_curation gene 30914376 30917212 . + . ID=GSCOCG00028154001;Name=Cc01_g12240 | |
| 16464 chr1 manual_curation mRNA 30914376 30917212 . + . ID=GSCOCT00028154001;Parent=GSCOCG00028154001;Name=Cc01_g12240 | |
| 16465 chr1 manual_curation polypeptide 30914517 30917004 . + . ID=GSCOCP00028154001;Dbxref=GENE3D:G3DSA:3.90.870.10,HAMAP:MF_00179,InterPro:IPR000422,InterPro:IPR000926,InterPro:IPR017945,PFAM:PF00925,PFAM:PF00926,SUPERFAMILY:SSF55821,SwissProt:A4X639,SwissProt:A8LY38,SwissProt:P47924,TAIR:AT2G22450.1,TAIR:AT5G59750.2,TAIR:AT5G64300.1,TIGRFAMs:TIGR00505,TIGRFAMs:TIGR00506,TrEMBL:B9GES8,TrEMBL:B9T7Y3,TrEMBL:D7SKL8;Derives_from=GSCOCT00028154001;Name=Cc01_g12240;Ontology_term=CC_evidence_code:ISS,GO:0003935,GO:0009231,CC_EC_number:3.5.4.25,PRODUCT:Riboflavin biosynthesis protein ribBA%2C chloroplastic,CC_functional_completeness:complete,CC_gene:RIBBA,CC_gene:ribBA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028154001~ Riboflavin biosynthesis protein ribBA%2C chloroplastic~ RIBBA~ complete;original_location=join(726978..727352%2C727451..727669%2C727920..728245%2C728547..728676%2C728766..729062%2C729202..729465);owner=coffea | |
| 16466 chr1 manual_curation exon 30914376 30914891 . + . Parent=GSCOCT00028154001 | |
| 16467 chr1 manual_curation exon 30914990 30915208 . + . Parent=GSCOCT00028154001 | |
| 16468 chr1 manual_curation exon 30915459 30915784 . + . Parent=GSCOCT00028154001 | |
| 16469 chr1 manual_curation exon 30916086 30916215 . + . Parent=GSCOCT00028154001 | |
| 16470 chr1 manual_curation exon 30916305 30916601 . + . Parent=GSCOCT00028154001 | |
| 16471 chr1 manual_curation exon 30916741 30917212 . + . Parent=GSCOCT00028154001 | |
| 16472 chr1 manual_curation CDS 30914517 30914891 . + 0 Parent=GSCOCT00028154001 | |
| 16473 chr1 manual_curation CDS 30914990 30915208 . + 0 Parent=GSCOCT00028154001 | |
| 16474 chr1 manual_curation CDS 30915459 30915784 . + 0 Parent=GSCOCT00028154001 | |
| 16475 chr1 manual_curation CDS 30916086 30916215 . + 2 Parent=GSCOCT00028154001 | |
| 16476 chr1 manual_curation CDS 30916305 30916601 . + 0 Parent=GSCOCT00028154001 | |
| 16477 chr1 manual_curation CDS 30916741 30917004 . + 0 Parent=GSCOCT00028154001 | |
| 16478 chr1 manual_curation gene 30918035 30924040 . - . ID=GSCOCG00028155001;Name=Cc01_g12250 | |
| 16479 chr1 manual_curation mRNA 30918035 30924040 . - . ID=GSCOCT00028155001;Parent=GSCOCG00028155001;Name=Cc01_g12250 | |
| 16480 chr1 manual_curation polypeptide 30918035 30923945 . - . ID=GSCOCP00028155001;Dbxref=InterPro:IPR001841,InterPro:IPR012862,InterPro:IPR018957,PFAM:PF00097,PFAM:PF07795,PROFILE:PS50089,SMART:SM00184,SwissProt:P0C041,SwissProt:Q84W40,SwissProt:Q8RXX9,TAIR:AT2G28690.1,TAIR:AT5G22930.1,TAIR:AT5G59760.1,TrEMBL:A5ARE7,TrEMBL:C8YZB5,TrEMBL:F6GTU2;Derives_from=GSCOCT00028155001;Name=Cc01_g12250;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of unknown function (DUF1635),CC_functional_completeness:modules,CC_gene:ATL53,CC_gene:ATL6,CC_gene:ATL11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028155001~ Putative Protein of unknown function (DUF1635)~ ATL53~ modules;original_location=complement(join(736371..736406%2C735074..735256%2C734863..734998%2C734487..734778%2C730496..731102));owner=coffea | |
| 16481 chr1 manual_curation exon 30918035 30918641 . - . Parent=GSCOCT00028155001 | |
| 16482 chr1 manual_curation exon 30922026 30922317 . - . Parent=GSCOCT00028155001 | |
| 16483 chr1 manual_curation exon 30922402 30922537 . - . Parent=GSCOCT00028155001 | |
| 16484 chr1 manual_curation exon 30922613 30922795 . - . Parent=GSCOCT00028155001 | |
| 16485 chr1 manual_curation exon 30923910 30924040 . - . Parent=GSCOCT00028155001 | |
| 16486 chr1 manual_curation CDS 30918035 30918641 . - 2 Parent=GSCOCT00028155001 | |
| 16487 chr1 manual_curation CDS 30922026 30922317 . - 1 Parent=GSCOCT00028155001 | |
| 16488 chr1 manual_curation CDS 30922402 30922537 . - 0 Parent=GSCOCT00028155001 | |
| 16489 chr1 manual_curation CDS 30922613 30922795 . - 0 Parent=GSCOCT00028155001 | |
| 16490 chr1 manual_curation CDS 30923910 30923945 . - 0 Parent=GSCOCT00028155001 | |
| 16491 chr1 manual_curation gene 30940463 30941777 . + . ID=GSCOCG00028156001;Name=Cc01_g12260 | |
| 16492 chr1 manual_curation mRNA 30940463 30941777 . + . ID=GSCOCT00028156001;Parent=GSCOCG00028156001;Name=Cc01_g12260 | |
| 16493 chr1 manual_curation polypeptide 30940570 30941579 . + . ID=GSCOCP00028156001;Dbxref=GENE3D:G3DSA:1.20.1080.10,InterPro:IPR000425,InterPro:IPR012269,InterPro:IPR022357,PANTHER:PTHR19139,PFAM:PF00230,PRINTS:PR00783,PROSITE:PS00221,SUPERFAMILY:SSF81338,SwissProt:O82598,SwissProt:P25818,SwissProt:Q94CS9,TAIR:AT2G36830.1,TAIR:AT3G26520.1,TAIR:AT4G01470.1,TIGRFAMs:TIGR00861,TrEMBL:I1M4S8,TrEMBL:Q2XVV9,TrEMBL:Q39883;Derives_from=GSCOCT00028156001;Name=Cc01_g12260;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006810,GO:0016020,GO:0016021,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Aquaporin TIP1-1,CC_functional_completeness:complete,CC_gene:TIP1-1,CC_gene:TIP1-3,CC_gene:TIP1-2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028156001~ Aquaporin TIP1-1~ TIP1-1~ complete;original_location=join(753031..753163%2C753302..753552%2C753669..754040);owner=coffea | |
| 16494 chr1 manual_curation exon 30940463 30940702 . + . Parent=GSCOCT00028156001 | |
| 16495 chr1 manual_curation exon 30940841 30941091 . + . Parent=GSCOCT00028156001 | |
| 16496 chr1 manual_curation exon 30941208 30941777 . + . Parent=GSCOCT00028156001 | |
| 16497 chr1 manual_curation CDS 30940570 30940702 . + 0 Parent=GSCOCT00028156001 | |
| 16498 chr1 manual_curation CDS 30940841 30941091 . + 1 Parent=GSCOCT00028156001 | |
| 16499 chr1 manual_curation CDS 30941208 30941579 . + 0 Parent=GSCOCT00028156001 | |
| 16500 chr1 manual_curation gene 30942260 30946332 . - . ID=GSCOCG00028157001;Name=Cc01_g12270 | |
| 16501 chr1 manual_curation mRNA 30942260 30946332 . - . ID=GSCOCT00028157001;Parent=GSCOCG00028157001;Name=Cc01_g12270 | |
| 16502 chr1 manual_curation polypeptide 30942674 30946311 . - . ID=GSCOCP00028157001;Dbxref=InterPro:IPR007482,PANTHER:PTHR11035,PFAM:PF04387,SwissProt:Q2KIP8,SwissProt:Q5RBK3,SwissProt:Q6Y1H2,TAIR:AT5G10480.3,TAIR:AT5G59770.1,TrEMBL:B9GES5,TrEMBL:C6T4V3,TrEMBL:G7JRH2;Derives_from=GSCOCT00028157001;Name=Cc01_g12270;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative 3-hydroxyacyl-CoA dehydratase 2,CC_functional_completeness:complete,CC_gene:PTPLB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028157001~ Putative 3-hydroxyacyl-CoA dehydratase 2~ PTPLB~ complete;original_location=complement(join(758714..758772%2C758555..758640%2C758386..758433%2C758200..758288%2C757907..757960%2C756381..756448%2C756214..756263%2C755987..756084%2C755135..755239));owner=coffea | |
| 16503 chr1 manual_curation exon 30942260 30942778 . - . Parent=GSCOCT00028157001 | |
| 16504 chr1 manual_curation exon 30943526 30943623 . - . Parent=GSCOCT00028157001 | |
| 16505 chr1 manual_curation exon 30943753 30943802 . - . Parent=GSCOCT00028157001 | |
| 16506 chr1 manual_curation exon 30943920 30943987 . - . Parent=GSCOCT00028157001 | |
| 16507 chr1 manual_curation exon 30945446 30945499 . - . Parent=GSCOCT00028157001 | |
| 16508 chr1 manual_curation exon 30945739 30945827 . - . Parent=GSCOCT00028157001 | |
| 16509 chr1 manual_curation exon 30945925 30945972 . - . Parent=GSCOCT00028157001 | |
| 16510 chr1 manual_curation exon 30946094 30946179 . - . Parent=GSCOCT00028157001 | |
| 16511 chr1 manual_curation exon 30946253 30946332 . - . Parent=GSCOCT00028157001 | |
| 16512 chr1 manual_curation CDS 30942674 30942778 . - 0 Parent=GSCOCT00028157001 | |
| 16513 chr1 manual_curation CDS 30943526 30943623 . - 1 Parent=GSCOCT00028157001 | |
| 16514 chr1 manual_curation CDS 30943753 30943802 . - 2 Parent=GSCOCT00028157001 | |
| 16515 chr1 manual_curation CDS 30943920 30943987 . - 0 Parent=GSCOCT00028157001 | |
| 16516 chr1 manual_curation CDS 30945446 30945499 . - 0 Parent=GSCOCT00028157001 | |
| 16517 chr1 manual_curation CDS 30945739 30945827 . - 1 Parent=GSCOCT00028157001 | |
| 16518 chr1 manual_curation CDS 30945925 30945972 . - 1 Parent=GSCOCT00028157001 | |
| 16519 chr1 manual_curation CDS 30946094 30946179 . - 2 Parent=GSCOCT00028157001 | |
| 16520 chr1 manual_curation CDS 30946253 30946311 . - 0 Parent=GSCOCT00028157001 | |
| 16521 chr1 manual_curation gene 30956599 30957619 . - . ID=GSCOCG00028159001;Name=Cc01_g12280 | |
| 16522 chr1 manual_curation mRNA 30956599 30957619 . - . ID=GSCOCT00028159001;Parent=GSCOCG00028159001;Name=Cc01_g12280 | |
| 16523 chr1 manual_curation polypeptide 30956599 30957541 . - . ID=GSCOCP00028159001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001005,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR014778,InterPro:IPR015495,InterPro:IPR017930,PANTHER:PTHR10641,PFAM:PF00249,PROFILE:PS51294,SMART:SM00717,SUPERFAMILY:SSF46689,SwissProt:Q4JL76,SwissProt:Q4JL84,SwissProt:Q9LX82,TAIR:AT3G46130.1,TAIR:AT4G13480.1,TAIR:AT5G59780.3,TrEMBL:B9HPK9,TrEMBL:B9SYQ1,TrEMBL:F6GV45;Derives_from=GSCOCT00028159001;Name=Cc01_g12280;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Transcription factor MYB48,CC_functional_completeness:fragment,CC_gene:MYB48,CC_gene:MYB59,CC_gene:MYBAS2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028159001~ Transcription factor MYB48~ MYB48~ fragment;original_location=complement(join(769888..770002%2C769662..769791%2C769171..769526%2C769060..769112));owner=coffea | |
| 16524 chr1 manual_curation exon 30956599 30956651 . - . Parent=GSCOCT00028159001 | |
| 16525 chr1 manual_curation exon 30956710 30957065 . - . Parent=GSCOCT00028159001 | |
| 16526 chr1 manual_curation exon 30957201 30957330 . - . Parent=GSCOCT00028159001 | |
| 16527 chr1 manual_curation exon 30957427 30957619 . - . Parent=GSCOCT00028159001 | |
| 16528 chr1 manual_curation CDS 30956599 30956651 . - 1 Parent=GSCOCT00028159001 | |
| 16529 chr1 manual_curation CDS 30956710 30957065 . - 2 Parent=GSCOCT00028159001 | |
| 16530 chr1 manual_curation CDS 30957201 30957330 . - 1 Parent=GSCOCT00028159001 | |
| 16531 chr1 manual_curation CDS 30957427 30957541 . - 0 Parent=GSCOCT00028159001 | |
| 16532 chr1 manual_curation gene 30974047 30977124 . + . ID=GSCOCG00028160001;Name=Cc01_g12290 | |
| 16533 chr1 manual_curation mRNA 30974047 30977124 . + . ID=GSCOCT00028160001;Parent=GSCOCG00028160001;Name=Cc01_g12290 | |
| 16534 chr1 manual_curation polypeptide 30974243 30976925 . + . ID=GSCOCP00028160001;Dbxref=InterPro:IPR010369,InterPro:IPR021182,PFAM:PF06136,PIR:PIRSF031043,TAIR:AT2G28150.1,TAIR:AT3G46110.1,TAIR:AT5G59790.1,TrEMBL:A5AZB6,TrEMBL:D7SKL0,TrEMBL:Q945F5;Derives_from=GSCOCT00028160001;Name=Cc01_g12290;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Domain of unknown function (DUF966),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028160001~ Domain of unknown function (DUF966)~ unknown_gene~ complete;original_location=join(786704..786938%2C787054..787123%2C787240..788133%2C789188..789386);owner=coffea | |
| 16535 chr1 manual_curation exon 30974047 30974477 . + . Parent=GSCOCT00028160001 | |
| 16536 chr1 manual_curation exon 30974593 30974662 . + . Parent=GSCOCT00028160001 | |
| 16537 chr1 manual_curation exon 30974779 30975672 . + . Parent=GSCOCT00028160001 | |
| 16538 chr1 manual_curation exon 30976727 30977124 . + . Parent=GSCOCT00028160001 | |
| 16539 chr1 manual_curation CDS 30974243 30974477 . + 0 Parent=GSCOCT00028160001 | |
| 16540 chr1 manual_curation CDS 30974593 30974662 . + 1 Parent=GSCOCT00028160001 | |
| 16541 chr1 manual_curation CDS 30974779 30975672 . + 2 Parent=GSCOCT00028160001 | |
| 16542 chr1 manual_curation CDS 30976727 30976925 . + 2 Parent=GSCOCT00028160001 | |
| 16543 chr1 manual_curation gene 30980581 30984029 . - . ID=GSCOCG00028161001;Name=Cc01_g12300 | |
| 16544 chr1 manual_curation mRNA 30980581 30984029 . - . ID=GSCOCT00028161001;Parent=GSCOCG00028161001;Name=Cc01_g12300 | |
| 16545 chr1 manual_curation polypeptide 30981032 30983872 . - . ID=GSCOCP00028161001;Dbxref=InterPro:IPR001739,InterPro:IPR016177,PFAM:PF01429,PROFILE:PS50982,SUPERFAMILY:SSF54171,TrEMBL:A5AZB5,TrEMBL:B9HPK6,TrEMBL:D7SKK8;Derives_from=GSCOCT00028161001;Name=Cc01_g12300;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0005634,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028161001~ Putative uncharacterized protein~ unknown_gene~ modules;original_location=complement(join(796091..796333%2C795518..795706%2C795379..795417%2C794391..794537%2C793988..794152%2C793493..793888));owner=coffea | |
| 16546 chr1 manual_curation exon 30980581 30981427 . - . Parent=GSCOCT00028161001 | |
| 16547 chr1 manual_curation exon 30981527 30981691 . - . Parent=GSCOCT00028161001 | |
| 16548 chr1 manual_curation exon 30981930 30982076 . - . Parent=GSCOCT00028161001 | |
| 16549 chr1 manual_curation exon 30982918 30982956 . - . Parent=GSCOCT00028161001 | |
| 16550 chr1 manual_curation exon 30983057 30983245 . - . Parent=GSCOCT00028161001 | |
| 16551 chr1 manual_curation exon 30983630 30984029 . - . Parent=GSCOCT00028161001 | |
| 16552 chr1 manual_curation CDS 30981032 30981427 . - 0 Parent=GSCOCT00028161001 | |
| 16553 chr1 manual_curation CDS 30981527 30981691 . - 0 Parent=GSCOCT00028161001 | |
| 16554 chr1 manual_curation CDS 30981930 30982076 . - 0 Parent=GSCOCT00028161001 | |
| 16555 chr1 manual_curation CDS 30982918 30982956 . - 0 Parent=GSCOCT00028161001 | |
| 16556 chr1 manual_curation CDS 30983057 30983245 . - 0 Parent=GSCOCT00028161001 | |
| 16557 chr1 manual_curation CDS 30983630 30983872 . - 0 Parent=GSCOCT00028161001 | |
| 16558 chr1 manual_curation gene 30989911 30996597 . + . ID=GSCOCG00028162001;Name=Cc01_g12310 | |
| 16559 chr1 manual_curation mRNA 30989911 30996597 . + . ID=GSCOCT00028162001;Parent=GSCOCG00028162001;Name=Cc01_g12310 | |
| 16560 chr1 manual_curation polypeptide 30990372 30996456 . + . ID=GSCOCP00028162001;Dbxref=InterPro:IPR001330,InterPro:IPR002365,InterPro:IPR008930,InterPro:IPR018333,PFAM:PF00432,PROSITE:PS01074,SUPERFAMILY:SSF48239,SwissProt:E7DN63,SwissProt:O82146,SwissProt:Q8W3Z1,TAIR:AT1G78950.1,TAIR:AT1G78955.1,TAIR:AT1G78960.1,TIGRFAMs:TIGR01787,TrEMBL:D9IXA8,TrEMBL:E2IUA6,TrEMBL:F6GYJ7;Derives_from=GSCOCT00028162001;Name=Cc01_g12310;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0016866,CC_EC_number:5.4.99.8,PRODUCT:Beta-Amyrin Synthase 2,CC_functional_completeness:complete,CC_gene:OSCPNY2,CC_gene:TTS1,CC_gene:OSCBPY;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028162001~ Beta-Amyrin Synthase 2~ OSCPNY2~ complete;original_location=join(802833..803033%2C804709..804894%2C804986..805075%2C805191..805388%2C805520..805604%2C806043..806209%2C806321..806509%2C806625..806738%2C806906..807025%2C807128..807250%2C807355..807453%2C807602..807658%2C807751..807797%2C807882..808025%2C808109..808286%2C808374..808454%2C808541..808624%2C808801..808917);owner=coffea | |
| 16561 chr1 manual_curation exon 30989911 30990155 . + . Parent=GSCOCT00028162001 | |
| 16562 chr1 manual_curation exon 30990327 30990572 . + . Parent=GSCOCT00028162001 | |
| 16563 chr1 manual_curation exon 30992248 30992433 . + . Parent=GSCOCT00028162001 | |
| 16564 chr1 manual_curation exon 30992525 30992614 . + . Parent=GSCOCT00028162001 | |
| 16565 chr1 manual_curation exon 30992730 30992927 . + . Parent=GSCOCT00028162001 | |
| 16566 chr1 manual_curation exon 30993059 30993143 . + . Parent=GSCOCT00028162001 | |
| 16567 chr1 manual_curation exon 30993582 30993748 . + . Parent=GSCOCT00028162001 | |
| 16568 chr1 manual_curation exon 30993860 30994048 . + . Parent=GSCOCT00028162001 | |
| 16569 chr1 manual_curation exon 30994164 30994277 . + . Parent=GSCOCT00028162001 | |
| 16570 chr1 manual_curation exon 30994445 30994564 . + . Parent=GSCOCT00028162001 | |
| 16571 chr1 manual_curation exon 30994667 30994789 . + . Parent=GSCOCT00028162001 | |
| 16572 chr1 manual_curation exon 30994894 30994992 . + . Parent=GSCOCT00028162001 | |
| 16573 chr1 manual_curation exon 30995141 30995197 . + . Parent=GSCOCT00028162001 | |
| 16574 chr1 manual_curation exon 30995290 30995336 . + . Parent=GSCOCT00028162001 | |
| 16575 chr1 manual_curation exon 30995421 30995564 . + . Parent=GSCOCT00028162001 | |
| 16576 chr1 manual_curation exon 30995648 30995825 . + . Parent=GSCOCT00028162001 | |
| 16577 chr1 manual_curation exon 30995913 30995993 . + . Parent=GSCOCT00028162001 | |
| 16578 chr1 manual_curation exon 30996080 30996163 . + . Parent=GSCOCT00028162001 | |
| 16579 chr1 manual_curation exon 30996340 30996597 . + . Parent=GSCOCT00028162001 | |
| 16580 chr1 manual_curation CDS 30990372 30990572 . + 0 Parent=GSCOCT00028162001 | |
| 16581 chr1 manual_curation CDS 30992248 30992433 . + 0 Parent=GSCOCT00028162001 | |
| 16582 chr1 manual_curation CDS 30992525 30992614 . + 0 Parent=GSCOCT00028162001 | |
| 16583 chr1 manual_curation CDS 30992730 30992927 . + 0 Parent=GSCOCT00028162001 | |
| 16584 chr1 manual_curation CDS 30993059 30993143 . + 0 Parent=GSCOCT00028162001 | |
| 16585 chr1 manual_curation CDS 30993582 30993748 . + 1 Parent=GSCOCT00028162001 | |
| 16586 chr1 manual_curation CDS 30993860 30994048 . + 0 Parent=GSCOCT00028162001 | |
| 16587 chr1 manual_curation CDS 30994164 30994277 . + 0 Parent=GSCOCT00028162001 | |
| 16588 chr1 manual_curation CDS 30994445 30994564 . + 0 Parent=GSCOCT00028162001 | |
| 16589 chr1 manual_curation CDS 30994667 30994789 . + 0 Parent=GSCOCT00028162001 | |
| 16590 chr1 manual_curation CDS 30994894 30994992 . + 0 Parent=GSCOCT00028162001 | |
| 16591 chr1 manual_curation CDS 30995141 30995197 . + 0 Parent=GSCOCT00028162001 | |
| 16592 chr1 manual_curation CDS 30995290 30995336 . + 0 Parent=GSCOCT00028162001 | |
| 16593 chr1 manual_curation CDS 30995421 30995564 . + 2 Parent=GSCOCT00028162001 | |
| 16594 chr1 manual_curation CDS 30995648 30995825 . + 2 Parent=GSCOCT00028162001 | |
| 16595 chr1 manual_curation CDS 30995913 30995993 . + 0 Parent=GSCOCT00028162001 | |
| 16596 chr1 manual_curation CDS 30996080 30996163 . + 0 Parent=GSCOCT00028162001 | |
| 16597 chr1 manual_curation CDS 30996340 30996456 . + 0 Parent=GSCOCT00028162001 | |
| 16598 chr1 manual_curation gene 31000080 31001092 . + . ID=GSCOCG00028163001;Name=Cc01_g12320 | |
| 16599 chr1 manual_curation mRNA 31000080 31001092 . + . ID=GSCOCT00028163001;Parent=GSCOCG00028163001;Name=Cc01_g12320 | |
| 16600 chr1 manual_curation polypeptide 31000289 31000813 . + . ID=GSCOCP00028163001;Dbxref=InterPro:IPR007087,InterPro:IPR015880,PROFILE:PS50157,PROSITE:PS00028,SMART:SM00355,SwissProt:Q42453,SwissProt:Q9LX85,SwissProt:Q9SLD4,TAIR:AT2G37430.1,TAIR:AT3G46080.1,TAIR:AT3G46090.1,TrEMBL:B2CZY8,TrEMBL:B9HTM6,TrEMBL:Q5TJD6;Derives_from=GSCOCT00028163001;Name=Cc01_g12320;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative Zinc finger protein ZAT11,CC_functional_completeness:complete,CC_gene:ZAT11,CC_gene:ZAT8,CC_gene:ZAT7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028163001~ Putative Zinc finger protein ZAT11~ ZAT11~ complete;original_location=812750..813274;owner=coffea | |
| 16601 chr1 manual_curation exon 31000080 31001092 . + . Parent=GSCOCT00028163001 | |
| 16602 chr1 manual_curation CDS 31000289 31000813 . + 0 Parent=GSCOCT00028163001 | |
| 16603 chr1 manual_curation gene 31005220 31005962 . + . ID=GSCOCG00028164001;Name=Cc01_g12330 | |
| 16604 chr1 manual_curation mRNA 31005220 31005962 . + . ID=GSCOCT00028164001;Parent=GSCOCG00028164001;Name=Cc01_g12330 | |
| 16605 chr1 manual_curation polypeptide 31005380 31005817 . + . ID=GSCOCP00028164001;Dbxref=InterPro:IPR007087,InterPro:IPR015880,PROFILE:PS50157,PROSITE:PS00028,SMART:SM00355,SwissProt:Q42410,SwissProt:Q42453,SwissProt:Q9LX85,TAIR:AT2G28710.1,TAIR:AT3G46090.1,TAIR:AT5G59820.1,TrEMBL:B2CZY8,TrEMBL:B9HTM6,TrEMBL:I1JDR7;Derives_from=GSCOCT00028164001;Name=Cc01_g12330;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative Zinc finger protein ZAT12,CC_functional_completeness:complete,CC_gene:ZAT12,CC_gene:ZAT7,CC_gene:ZAT8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028164001~ Putative Zinc finger protein ZAT12~ ZAT12~ complete;original_location=817841..818278;owner=coffea | |
| 16606 chr1 manual_curation exon 31005220 31005962 . + . Parent=GSCOCT00028164001 | |
| 16607 chr1 manual_curation CDS 31005380 31005817 . + 0 Parent=GSCOCT00028164001 | |
| 16608 chr1 manual_curation gene 31010021 31012358 . + . ID=GSCOCG00028165001;Name=Cc01_g12340 | |
| 16609 chr1 manual_curation mRNA 31010021 31012358 . + . ID=GSCOCT00028165001;Parent=GSCOCG00028165001;Name=Cc01_g12340 | |
| 16610 chr1 manual_curation polypeptide 31010021 31012358 . + . ID=GSCOCP00028165001;Dbxref=InterPro:IPR000300,InterPro:IPR005135,PFAM:PF03372,SMART:SM00128,SUPERFAMILY:SSF56219,SwissProt:Q84MA2,SwissProt:Q9FUR2,SwissProt:Q9LR47,TAIR:AT2G01900.1,TAIR:AT2G32010.1,TAIR:AT2G37440.1,TrEMBL:I1L8M1,TrEMBL:I1LYV9,TrEMBL:I1NA07;Derives_from=GSCOCT00028165001;Name=Cc01_g12340;Ontology_term=CC_evidence_code:ISS,GO:0004437,CC_EC_number:3.1.3.56,PRODUCT:Putative Type I inositol 1%2C4%2C5-trisphosphate 5-phosphatase CVP2,CC_functional_completeness:fragment,CC_gene:CVP2,CC_gene:IP5P1,CC_gene:IP5P2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028165001~ Putative Type I inositol 1%2C4%2C5-trisphosphate 5-phosphatase CVP2~ CVP2~ fragment;original_location=join(822482..822588%2C823097..823137%2C823335..823351%2C823415..823528%2C823678..823776%2C823871..824058%2C824243..824306%2C824480..824535%2C824699..824819);owner=coffea | |
| 16611 chr1 manual_curation exon 31010021 31010127 . + . Parent=GSCOCT00028165001 | |
| 16612 chr1 manual_curation exon 31010636 31010676 . + . Parent=GSCOCT00028165001 | |
| 16613 chr1 manual_curation exon 31010874 31010890 . + . Parent=GSCOCT00028165001 | |
| 16614 chr1 manual_curation exon 31010954 31011067 . + . Parent=GSCOCT00028165001 | |
| 16615 chr1 manual_curation exon 31011217 31011315 . + . Parent=GSCOCT00028165001 | |
| 16616 chr1 manual_curation exon 31011410 31011597 . + . Parent=GSCOCT00028165001 | |
| 16617 chr1 manual_curation exon 31011782 31011845 . + . Parent=GSCOCT00028165001 | |
| 16618 chr1 manual_curation exon 31012019 31012074 . + . Parent=GSCOCT00028165001 | |
| 16619 chr1 manual_curation exon 31012238 31012358 . + . Parent=GSCOCT00028165001 | |
| 16620 chr1 manual_curation CDS 31010021 31010127 . + 0 Parent=GSCOCT00028165001 | |
| 16621 chr1 manual_curation CDS 31010636 31010676 . + 2 Parent=GSCOCT00028165001 | |
| 16622 chr1 manual_curation CDS 31010874 31010890 . + 1 Parent=GSCOCT00028165001 | |
| 16623 chr1 manual_curation CDS 31010954 31011067 . + 0 Parent=GSCOCT00028165001 | |
| 16624 chr1 manual_curation CDS 31011217 31011315 . + 0 Parent=GSCOCT00028165001 | |
| 16625 chr1 manual_curation CDS 31011410 31011597 . + 0 Parent=GSCOCT00028165001 | |
| 16626 chr1 manual_curation CDS 31011782 31011845 . + 2 Parent=GSCOCT00028165001 | |
| 16627 chr1 manual_curation CDS 31012019 31012074 . + 0 Parent=GSCOCT00028165001 | |
| 16628 chr1 manual_curation CDS 31012238 31012358 . + 2 Parent=GSCOCT00028165001 | |
| 16629 chr1 manual_curation gene 31014272 31015138 . + . ID=GSCOCG00028166001;Name=Cc01_g12350 | |
| 16630 chr1 manual_curation mRNA 31014272 31015138 . + . ID=GSCOCT00028166001;Parent=GSCOCG00028166001;Name=Cc01_g12350 | |
| 16631 chr1 manual_curation polypeptide 31014272 31015138 . + . ID=GSCOCP00028166001;Dbxref=GENE3D:G3DSA:2.120.10.80,InterPro:IPR001810,InterPro:IPR006652,InterPro:IPR011043,InterPro:IPR013089,InterPro:IPR015915,PANTHER:PTHR23230,PFAM:PF00646,PFAM:PF01344,SMART:SM00612,SUPERFAMILY:SSF50965,SwissProt:O80582,SwissProt:Q9LMR5,SwissProt:Q9M8L2,TAIR:AT1G15670.1,TAIR:AT1G80440.1,TAIR:AT2G44130.1,TrEMBL:A5AF42,TrEMBL:B9RUU9,TrEMBL:F6HX37;Derives_from=GSCOCT00028166001;Name=Cc01_g12350;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative F-box/kelch-repeat protein At1g80440,CC_functional_completeness:fragment,CC_gene:At1g80440,CC_gene:At1g15670,CC_gene:At2g44130;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028166001~ Putative F-box/kelch-repeat protein At1g80440~ At1g80440~ fragment;original_location=826733..827599;owner=coffea | |
| 16632 chr1 manual_curation exon 31014272 31015138 . + . Parent=GSCOCT00028166001 | |
| 16633 chr1 manual_curation CDS 31014272 31015138 . + 0 Parent=GSCOCT00028166001 | |
| 16634 chr1 manual_curation gene 31017539 31021007 . + . ID=GSCOCG00028167001;Name=Cc01_g12360 | |
| 16635 chr1 manual_curation mRNA 31017539 31021007 . + . ID=GSCOCT00028167001;Parent=GSCOCG00028167001;Name=Cc01_g12360 | |
| 16636 chr1 manual_curation polypeptide 31018685 31020728 . + . ID=GSCOCP00028167001;Dbxref=TAIR:AT3G53680.1,TAIR:AT5G13660.2,TAIR:AT5G59830.1,TrEMBL:B9HPK4,TrEMBL:F6GV43,TrEMBL:I1LK58;Derives_from=GSCOCT00028167001;Name=Cc01_g12360;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028167001~ Putative unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13660.2)%3B Has 174 Blast hits to 139 proteins in 16 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 172%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(831146..831166%2C831251..831274%2C831513..832568%2C832651..832716%2C832792..832990%2C833125..833189);owner=coffea | |
| 16637 chr1 manual_curation exon 31017539 31018705 . + . Parent=GSCOCT00028167001 | |
| 16638 chr1 manual_curation exon 31018790 31018813 . + . Parent=GSCOCT00028167001 | |
| 16639 chr1 manual_curation exon 31019052 31020107 . + . Parent=GSCOCT00028167001 | |
| 16640 chr1 manual_curation exon 31020190 31020255 . + . Parent=GSCOCT00028167001 | |
| 16641 chr1 manual_curation exon 31020331 31020529 . + . Parent=GSCOCT00028167001 | |
| 16642 chr1 manual_curation exon 31020664 31021007 . + . Parent=GSCOCT00028167001 | |
| 16643 chr1 manual_curation CDS 31018685 31018705 . + 0 Parent=GSCOCT00028167001 | |
| 16644 chr1 manual_curation CDS 31018790 31018813 . + 0 Parent=GSCOCT00028167001 | |
| 16645 chr1 manual_curation CDS 31019052 31020107 . + 0 Parent=GSCOCT00028167001 | |
| 16646 chr1 manual_curation CDS 31020190 31020255 . + 0 Parent=GSCOCT00028167001 | |
| 16647 chr1 manual_curation CDS 31020331 31020529 . + 0 Parent=GSCOCT00028167001 | |
| 16648 chr1 manual_curation CDS 31020664 31020728 . + 1 Parent=GSCOCT00028167001 | |
| 16649 chr1 manual_curation gene 31021611 31025254 . - . ID=GSCOCG00028168001;Name=Cc01_g12370 | |
| 16650 chr1 manual_curation mRNA 31021611 31025254 . - . ID=GSCOCT00028168001;Parent=GSCOCG00028168001;Name=Cc01_g12370 | |
| 16651 chr1 manual_curation polypeptide 31021880 31024924 . - . ID=GSCOCP00028168001;Dbxref=InterPro:IPR001806,InterPro:IPR002041,InterPro:IPR003577,InterPro:IPR003578,InterPro:IPR003579,InterPro:IPR005225,InterPro:IPR006688,InterPro:IPR013753,InterPro:IPR020851,PFAM:PF00071,PRINTS:PR00449,PROFILE:PS51419,SMART:SM00173,SMART:SM00174,SMART:SM00175,SMART:SM00176,SMART:SM00177,SwissProt:O24466,SwissProt:P28186,SwissProt:Q39433,TAIR:AT3G46060.1,TAIR:AT3G53610.1,TAIR:AT5G59840.1,TIGRFAMs:TIGR00231,TrEMBL:G7IBN4,TrEMBL:G7IBN6,TrEMBL:Q41024;Derives_from=GSCOCT00028168001;Name=Cc01_g12370;Ontology_term=CC_evidence_code:ISS,GO:0003924,GO:0005515,GO:0005525,GO:0005622,GO:0006886,GO:0006913,GO:0007165,GO:0007264,GO:0015031,CC_EC_number:missing_EC_number,PRODUCT:Ras-related protein RABE1c,CC_functional_completeness:complete,CC_gene:RABE1C,CC_gene:RABE1A,CC_gene:RAB1BV;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028168001~ Ras-related protein RABE1c~ RABE1C~ complete;original_location=complement(join(837313..837385%2C836159..836231%2C835948..836048%2C835407..835472%2C834906..835003%2C834672..834734%2C834503..834595%2C834341..834424));owner=coffea | |
| 16652 chr1 manual_curation exon 31025154 31025254 . - . Parent=GSCOCT00028168001 | |
| 16653 chr1 manual_curation exon 31021611 31021963 . - . Parent=GSCOCT00028168001 | |
| 16654 chr1 manual_curation exon 31022042 31022134 . - . Parent=GSCOCT00028168001 | |
| 16655 chr1 manual_curation exon 31022211 31022273 . - . Parent=GSCOCT00028168001 | |
| 16656 chr1 manual_curation exon 31022445 31022542 . - . Parent=GSCOCT00028168001 | |
| 16657 chr1 manual_curation exon 31022946 31023011 . - . Parent=GSCOCT00028168001 | |
| 16658 chr1 manual_curation exon 31023487 31023587 . - . Parent=GSCOCT00028168001 | |
| 16659 chr1 manual_curation exon 31023698 31023770 . - . Parent=GSCOCT00028168001 | |
| 16660 chr1 manual_curation exon 31024852 31025024 . - . Parent=GSCOCT00028168001 | |
| 16661 chr1 manual_curation CDS 31021880 31021963 . - 0 Parent=GSCOCT00028168001 | |
| 16662 chr1 manual_curation CDS 31022042 31022134 . - 0 Parent=GSCOCT00028168001 | |
| 16663 chr1 manual_curation CDS 31022211 31022273 . - 0 Parent=GSCOCT00028168001 | |
| 16664 chr1 manual_curation CDS 31022445 31022542 . - 1 Parent=GSCOCT00028168001 | |
| 16665 chr1 manual_curation CDS 31022946 31023011 . - 1 Parent=GSCOCT00028168001 | |
| 16666 chr1 manual_curation CDS 31023487 31023587 . - 2 Parent=GSCOCT00028168001 | |
| 16667 chr1 manual_curation CDS 31023698 31023770 . - 1 Parent=GSCOCT00028168001 | |
| 16668 chr1 manual_curation CDS 31024852 31024924 . - 0 Parent=GSCOCT00028168001 | |
| 16669 chr1 manual_curation gene 31034703 31035459 . + . ID=GSCOCG00028170001;Name=Cc01_g12380 | |
| 16670 chr1 manual_curation mRNA 31034703 31035459 . + . ID=GSCOCT00028170001;Parent=GSCOCG00028170001;Name=Cc01_g12380 | |
| 16671 chr1 manual_curation polypeptide 31034778 31035224 . + . ID=GSCOCP00028170001;Dbxref=GENE3D:G3DSA:1.10.20.10,InterPro:IPR000558,InterPro:IPR007125,InterPro:IPR009072,PANTHER:PTHR23428,PFAM:PF00125,PRINTS:PR00621,PROSITE:PS00357,SMART:SM00427,SUPERFAMILY:SSF47113,SwissProt:P93354,SwissProt:Q1S9I9,SwissProt:Q1SWQ1,TAIR:AT1G07790.1,TAIR:AT2G28720.1,TAIR:AT3G45980.1,TrEMBL:B7FHC9,TrEMBL:G7JTQ7,TrEMBL:G7JTQ9;Derives_from=GSCOCT00028170001;Name=Cc01_g12380;Ontology_term=CC_evidence_code:ISS,GO:0000786,GO:0003677,GO:0005634,GO:0006334,CC_EC_number:missing_EC_number,PRODUCT:Probable histone H2B.1,CC_functional_completeness:complete,CC_gene:HIS2B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028170001~ Probable histone H2B.1~ HIS2B~ complete;original_location=847239..847685;owner=coffea | |
| 16672 chr1 manual_curation exon 31034703 31035459 . + . Parent=GSCOCT00028170001 | |
| 16673 chr1 manual_curation CDS 31034778 31035224 . + 0 Parent=GSCOCT00028170001 | |
| 16674 chr1 manual_curation gene 31050257 31051573 . - . ID=GSCOCG00028172001;Name=Cc01_g12390 | |
| 16675 chr1 manual_curation mRNA 31050257 31051573 . - . ID=GSCOCT00028172001;Parent=GSCOCG00028172001;Name=Cc01_g12390 | |
| 16676 chr1 manual_curation polypeptide 31050587 31051533 . - . ID=GSCOCP00028172001;Dbxref=InterPro:IPR007741,InterPro:IPR016464,PFAM:PF05047,PIR:PIRSF005822,SwissProt:P0CB80,SwissProt:Q02370,SwissProt:Q9FIJ2,TAIR:AT5G47890.1,TrEMBL:A9P8N8,TrEMBL:A9PIT1,TrEMBL:C6SYI2;Derives_from=GSCOCT00028172001;Name=Cc01_g12390;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2,CC_functional_completeness:complete,CC_gene:At5g47890,CC_gene:NDUFA2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028172001~ NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2~ At5g47890~ complete;original_location=complement(join(863909..863994%2C863687..863793%2C863048..863151));owner=coffea | |
| 16677 chr1 manual_curation exon 31050257 31050690 . - . Parent=GSCOCT00028172001 | |
| 16678 chr1 manual_curation exon 31051226 31051332 . - . Parent=GSCOCT00028172001 | |
| 16679 chr1 manual_curation exon 31051448 31051573 . - . Parent=GSCOCT00028172001 | |
| 16680 chr1 manual_curation CDS 31050587 31050690 . - 1 Parent=GSCOCT00028172001 | |
| 16681 chr1 manual_curation CDS 31051226 31051332 . - 2 Parent=GSCOCT00028172001 | |
| 16682 chr1 manual_curation CDS 31051448 31051533 . - 0 Parent=GSCOCT00028172001 | |
| 16683 chr1 manual_curation gene 31052682 31054293 . + . ID=GSCOCG00028173001;Name=Cc01_g12400 | |
| 16684 chr1 manual_curation mRNA 31052682 31054293 . + . ID=GSCOCT00028173001;Parent=GSCOCG00028173001;Name=Cc01_g12400 | |
| 16685 chr1 manual_curation polypeptide 31052682 31054293 . + . ID=GSCOCP00028173001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR012677,PFAM:PF00076,PROFILE:PS50102,SMART:SM00360,SwissProt:Q28IQ9,SwissProt:Q5RF83,SwissProt:Q9DED4,TAIR:AT3G20930.1,TAIR:AT3G46020.1,TAIR:AT5G59860.1,TrEMBL:B9GER8,TrEMBL:F6GV38,TrEMBL:I1M4U1;Derives_from=GSCOCT00028173001;Name=Cc01_g12400;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,CC_EC_number:missing_EC_number,PRODUCT:Putative Cold-inducible RNA-binding protein,CC_functional_completeness:fragment,CC_gene:cirbp,CC_gene:cirbp-b,CC_gene:CIRBP;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028173001~ Putative Cold-inducible RNA-binding protein~ cirbp~ fragment;original_location=join(865143..865176%2C865361..865429%2C865655..865761%2C866686..866754);owner=coffea | |
| 16686 chr1 manual_curation exon 31052682 31052715 . + . Parent=GSCOCT00028173001 | |
| 16687 chr1 manual_curation exon 31052900 31052968 . + . Parent=GSCOCT00028173001 | |
| 16688 chr1 manual_curation exon 31053194 31053300 . + . Parent=GSCOCT00028173001 | |
| 16689 chr1 manual_curation exon 31054225 31054293 . + . Parent=GSCOCT00028173001 | |
| 16690 chr1 manual_curation CDS 31052682 31052715 . + 0 Parent=GSCOCT00028173001 | |
| 16691 chr1 manual_curation CDS 31052900 31052968 . + 1 Parent=GSCOCT00028173001 | |
| 16692 chr1 manual_curation CDS 31053194 31053300 . + 1 Parent=GSCOCT00028173001 | |
| 16693 chr1 manual_curation CDS 31054225 31054293 . + 0 Parent=GSCOCT00028173001 | |
| 16694 chr1 manual_curation gene 31054365 31055514 . + . ID=GSCOCG00028174001;Name=Cc01_g12410 | |
| 16695 chr1 manual_curation mRNA 31054365 31055514 . + . ID=GSCOCT00028174001;Parent=GSCOCG00028174001;Name=Cc01_g12410 | |
| 16696 chr1 manual_curation polypeptide 31054365 31055129 . + . ID=GSCOCP00028174001;Dbxref=InterPro:IPR005349,PANTHER:PTHR12668,PFAM:PF03647,SwissProt:O64847,TAIR:AT2G26240.1,TAIR:AT3G43520.1,TrEMBL:F6HGK6,TrEMBL:I1LYC8,TrEMBL:I1MS15;Derives_from=GSCOCT00028174001;Name=Cc01_g12410;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:UPF0136 membrane protein At2g26240,CC_functional_completeness:modules,CC_gene:At2g26240;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028174001~ UPF0136 membrane protein At2g26240~ At2g26240~ modules;original_location=866826..867590;owner=coffea | |
| 16697 chr1 manual_curation exon 31054365 31055514 . + . Parent=GSCOCT00028174001 | |
| 16698 chr1 manual_curation CDS 31054365 31055129 . + 0 Parent=GSCOCT00028174001 | |
| 16699 chr1 manual_curation gene 31057505 31057762 . - . ID=GSCOCG00028176001;Name=Cc01_g12420 | |
| 16700 chr1 manual_curation mRNA 31057505 31057762 . - . ID=GSCOCT00028176001;Parent=GSCOCG00028176001;Name=Cc01_g12420 | |
| 16701 chr1 manual_curation polypeptide 31057505 31057762 . - . ID=GSCOCP00028176001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR012677,InterPro:IPR015465,PANTHER:PTHR10432:SF31,PFAM:PF00076,PROFILE:PS50102,TrEMBL:B4UWA5,TrEMBL:B9T4D4,TrEMBL:C6SZT2;Derives_from=GSCOCT00028176001;Name=Cc01_g12420;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,CC_EC_number:missing_EC_number,PRODUCT:Glycine-rich RNA-binding protein%2C putative,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028176001~ Glycine-rich RNA-binding protein%2C putative~ unknown_gene~ fragment;original_location=complement(join(870104..870223%2C869966..870013));owner=coffea | |
| 16702 chr1 manual_curation exon 31057505 31057552 . - . Parent=GSCOCT00028176001 | |
| 16703 chr1 manual_curation exon 31057643 31057762 . - . Parent=GSCOCT00028176001 | |
| 16704 chr1 manual_curation CDS 31057505 31057552 . - 0 Parent=GSCOCT00028176001 | |
| 16705 chr1 manual_curation CDS 31057643 31057762 . - 0 Parent=GSCOCT00028176001 | |
| 16706 chr1 manual_curation gene 31057812 31058825 . - . ID=GSCOCG00028177001;Name=Cc01_g12430 | |
| 16707 chr1 manual_curation mRNA 31057812 31058825 . - . ID=GSCOCT00028177001;Parent=GSCOCG00028177001;Name=Cc01_g12430 | |
| 16708 chr1 manual_curation polypeptide 31057812 31058825 . - . ID=GSCOCP00028177001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR012677,InterPro:IPR015465,PANTHER:PTHR10432:SF31,PFAM:PF00076,TrEMBL:B9GER7;Derives_from=GSCOCT00028177001;Name=Cc01_g12430;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028177001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(871193..871286%2C870273..870361));owner=coffea | |
| 16709 chr1 manual_curation exon 31057812 31057900 . - . Parent=GSCOCT00028177001 | |
| 16710 chr1 manual_curation exon 31058732 31058825 . - . Parent=GSCOCT00028177001 | |
| 16711 chr1 manual_curation CDS 31057812 31057900 . - 1 Parent=GSCOCT00028177001 | |
| 16712 chr1 manual_curation CDS 31058732 31058825 . - 0 Parent=GSCOCT00028177001 | |
| 16713 chr1 manual_curation gene 31066136 31067247 . - . ID=GSCOCG00028179001;Name=Cc01_g12440 | |
| 16714 chr1 manual_curation mRNA 31066136 31067247 . - . ID=GSCOCT00028179001;Parent=GSCOCG00028179001;Name=Cc01_g12440 | |
| 16715 chr1 manual_curation polypeptide 31066359 31067126 . - . ID=GSCOCP00028179001;Dbxref=GENE3D:G3DSA:1.10.20.10,InterPro:IPR002119,InterPro:IPR007125,InterPro:IPR009072,PANTHER:PTHR23430,PFAM:PF00125,PRINTS:PR00620,PROSITE:PS00046,SMART:SM00414,SUPERFAMILY:SSF47113,SwissProt:Q2HU68,SwissProt:Q9LZ46,SwissProt:Q9M531,TAIR:AT5G02560.2,TAIR:AT5G27670.1,TAIR:AT5G59870.1,TrEMBL:A9PDX1,TrEMBL:B6SI29,TrEMBL:C6SWA6,TrEMBL:C6SZZ2;Derives_from=GSCOCT00028179001;Name=Cc01_g12440;Ontology_term=CC_evidence_code:ISS,GO:0000786,GO:0003677,GO:0005634,GO:0006334,CC_EC_number:missing_EC_number,PRODUCT:Histone H2A,CC_functional_completeness:complete,CC_gene:At5g02560,CC_gene:MtrDRAFT_AC149210g1v1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028179001~ Histone H2A~ At5g02560~ complete;original_location=complement(join(879378..879587%2C878820..879089));owner=coffea | |
| 16716 chr1 manual_curation exon 31066136 31066628 . - . Parent=GSCOCT00028179001 | |
| 16717 chr1 manual_curation exon 31066917 31067247 . - . Parent=GSCOCT00028179001 | |
| 16718 chr1 manual_curation CDS 31066359 31066628 . - 0 Parent=GSCOCT00028179001 | |
| 16719 chr1 manual_curation CDS 31066917 31067126 . - 0 Parent=GSCOCT00028179001 | |
| 16720 chr1 manual_curation gene 31074528 31076807 . + . ID=GSCOCG00028181001;Name=Cc01_g12450 | |
| 16721 chr1 manual_curation mRNA 31074528 31076807 . + . ID=GSCOCT00028181001;Parent=GSCOCG00028181001;Name=Cc01_g12450 | |
| 16722 chr1 manual_curation polypeptide 31074925 31075452 . + . ID=GSCOCP00028181001;Dbxref=InterPro:IPR002108,PFAM:PF00241,PROFILE:PS51263,SMART:SM00102,SwissProt:Q39250,SwissProt:Q9FVI2,SwissProt:Q9ZSK3,TAIR:AT3G46010.2,TAIR:AT5G59880.1,TAIR:AT5G59890.1,TrEMBL:A9P876,TrEMBL:A9PIW8,TrEMBL:B9T4D2,TrEMBL:C6SYJ7,TrEMBL:D9I9X9;Derives_from=GSCOCT00028181001;Name=Cc01_g12450;Ontology_term=CC_evidence_code:ISS,GO:0003779,GO:0005622,CC_EC_number:missing_EC_number,PRODUCT:Actin-depolymerizing factor 1,CC_functional_completeness:complete,CC_gene:ADF1,CC_gene:ADF4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028181001~ Actin-depolymerizing factor 1~ ADF1~ complete;original_location=join(887386..887633%2C887763..887913);owner=coffea | |
| 16723 chr1 manual_curation exon 31074528 31075172 . + . Parent=GSCOCT00028181001 | |
| 16724 chr1 manual_curation exon 31075302 31076807 . + . Parent=GSCOCT00028181001 | |
| 16725 chr1 manual_curation CDS 31074925 31075172 . + 0 Parent=GSCOCT00028181001 | |
| 16726 chr1 manual_curation CDS 31075302 31075452 . + 2 Parent=GSCOCT00028181001 | |
| 16727 chr1 manual_curation gene 31076867 31078931 . - . ID=GSCOCG00028182001;Name=Cc01_g12460 | |
| 16728 chr1 manual_curation mRNA 31076867 31078931 . - . ID=GSCOCT00028182001;Parent=GSCOCG00028182001;Name=Cc01_g12460 | |
| 16729 chr1 manual_curation polypeptide 31077080 31078931 . - . ID=GSCOCP00028182001;Dbxref=TrEMBL:G7JPJ9;Derives_from=GSCOCT00028182001;Name=Cc01_g12460;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028182001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(890995..891392%2C889541..889598));owner=coffea | |
| 16730 chr1 manual_curation exon 31076867 31077137 . - . Parent=GSCOCT00028182001 | |
| 16731 chr1 manual_curation exon 31078534 31078931 . - . Parent=GSCOCT00028182001 | |
| 16732 chr1 manual_curation CDS 31077080 31077137 . - 2 Parent=GSCOCT00028182001 | |
| 16733 chr1 manual_curation CDS 31078534 31078931 . - 0 Parent=GSCOCT00028182001 | |
| 16734 chr1 manual_curation gene 31083332 31084039 . + . ID=GSCOCG00028183001;Name=Cc01_g12470 | |
| 16735 chr1 manual_curation mRNA 31083332 31084039 . + . ID=GSCOCT00028183001;Parent=GSCOCG00028183001;Name=Cc01_g12470 | |
| 16736 chr1 manual_curation polypeptide 31083427 31083888 . + . ID=GSCOCP00028183001;Dbxref=GENE3D:G3DSA:1.10.20.10,InterPro:IPR000558,InterPro:IPR007125,InterPro:IPR009072,PANTHER:PTHR23428,PFAM:PF00125,PRINTS:PR00621,PROSITE:PS00357,SMART:SM00427,SUPERFAMILY:SSF47113,SwissProt:O23629,SwissProt:Q1S9I9,SwissProt:Q1SWQ1,TAIR:AT1G07790.1,TAIR:AT2G28720.1,TAIR:AT3G45980.1,TrEMBL:B7FHC9,TrEMBL:G7JTQ7,TrEMBL:G7JTQ9;Derives_from=GSCOCT00028183001;Name=Cc01_g12470;Ontology_term=CC_evidence_code:ISS,GO:0000786,GO:0003677,GO:0005634,GO:0006334,CC_EC_number:missing_EC_number,PRODUCT:Probable histone H2B.1,CC_functional_completeness:complete,CC_gene:H2B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028183001~ Probable histone H2B.1~ H2B~ complete;original_location=895888..896349;owner=coffea | |
| 16737 chr1 manual_curation exon 31083332 31084039 . + . Parent=GSCOCT00028183001 | |
| 16738 chr1 manual_curation CDS 31083427 31083888 . + 0 Parent=GSCOCT00028183001 | |
| 16739 chr1 manual_curation gene 31085560 31088958 . + . ID=GSCOCG00028184001;Name=Cc01_g12480 | |
| 16740 chr1 manual_curation mRNA 31085560 31088958 . + . ID=GSCOCT00028184001;Parent=GSCOCG00028184001;Name=Cc01_g12480 | |
| 16741 chr1 manual_curation polypeptide 31086577 31087541 . + . ID=GSCOCP00028184001;Dbxref=GENE3D:G3DSA:3.30.70.640,InterPro:IPR002820,PFAM:PF01967,SUPERFAMILY:SSF55040,SwissProt:Q39056,SwissProt:Q5RKZ7,SwissProt:Q9NZB8,TAIR:AT1G01290.1,TIGRFAMs:TIGR00581,TrEMBL:B9SE98,TrEMBL:D7UCU5,TrEMBL:I1NF50;Derives_from=GSCOCT00028184001;Name=Cc01_g12480;Ontology_term=CC_evidence_code:ISS,GO:0006777,CC_EC_number:missing_EC_number,PRODUCT:Molybdopterin biosynthesis protein CNX3,CC_functional_completeness:complete,CC_gene:CNX3,CC_gene:MOCS1,CC_gene:Mocs1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028184001~ Molybdopterin biosynthesis protein CNX3~ CNX3~ complete;original_location=join(899038..899142%2C899394..900002);owner=coffea | |
| 16742 chr1 manual_curation exon 31085560 31085794 . + . Parent=GSCOCT00028184001 | |
| 16743 chr1 manual_curation exon 31085990 31086208 . + . Parent=GSCOCT00028184001 | |
| 16744 chr1 manual_curation exon 31086555 31086681 . + . Parent=GSCOCT00028184001 | |
| 16745 chr1 manual_curation exon 31086933 31088958 . + . Parent=GSCOCT00028184001 | |
| 16746 chr1 manual_curation CDS 31086577 31086681 . + 0 Parent=GSCOCT00028184001 | |
| 16747 chr1 manual_curation CDS 31086933 31087541 . + 0 Parent=GSCOCT00028184001 | |
| 16748 chr1 manual_curation gene 31090721 31094254 . + . ID=GSCOCG00028185001;Name=Cc01_g12490 | |
| 16749 chr1 manual_curation mRNA 31090721 31094254 . + . ID=GSCOCT00028185001;Parent=GSCOCG00028185001;Name=Cc01_g12490 | |
| 16750 chr1 manual_curation polypeptide 31090826 31093224 . + . ID=GSCOCP00028185001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR012677,PFAM:PF00076,PROFILE:PS50102,SMART:SM00360,SwissProt:Q28FB9,SwissProt:Q58EA2,SwissProt:Q9JJW6,TAIR:AT1G66260.1,TAIR:AT5G02530.1,TAIR:AT5G59950.5,TrEMBL:B9SZF6,TrEMBL:D7SKJ4,TrEMBL:I1LK48;Derives_from=GSCOCT00028185001;Name=Cc01_g12490;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,CC_EC_number:missing_EC_number,PRODUCT:RNA-binding (RRM/RBD/RNP motifs) family protein,CC_functional_completeness:complete,CC_gene:alyref-a,CC_gene:Refbp2,CC_gene:alyref;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028185001~ RNA-binding (RRM/RBD/RNP motifs) family protein~ alyref-a~ complete;original_location=join(903287..903454%2C903533..903703%2C904311..904379%2C904459..904643%2C905517..905685);owner=coffea | |
| 16751 chr1 manual_curation exon 31090721 31090993 . + . Parent=GSCOCT00028185001 | |
| 16752 chr1 manual_curation exon 31091072 31091242 . + . Parent=GSCOCT00028185001 | |
| 16753 chr1 manual_curation exon 31091850 31091918 . + . Parent=GSCOCT00028185001 | |
| 16754 chr1 manual_curation exon 31091998 31092182 . + . Parent=GSCOCT00028185001 | |
| 16755 chr1 manual_curation exon 31093056 31094254 . + . Parent=GSCOCT00028185001 | |
| 16756 chr1 manual_curation CDS 31090826 31090993 . + 0 Parent=GSCOCT00028185001 | |
| 16757 chr1 manual_curation CDS 31091072 31091242 . + 0 Parent=GSCOCT00028185001 | |
| 16758 chr1 manual_curation CDS 31091850 31091918 . + 0 Parent=GSCOCT00028185001 | |
| 16759 chr1 manual_curation CDS 31091998 31092182 . + 0 Parent=GSCOCT00028185001 | |
| 16760 chr1 manual_curation CDS 31093056 31093224 . + 2 Parent=GSCOCT00028185001 | |
| 16761 chr1 manual_curation gene 31096103 31101755 . - . ID=GSCOCG00028187001;Name=Cc01_g12500 | |
| 16762 chr1 manual_curation mRNA 31096103 31101755 . - . ID=GSCOCT00028187001;Parent=GSCOCG00028187001;Name=Cc01_g12500 | |
| 16763 chr1 manual_curation polypeptide 31096278 31101377 . - . ID=GSCOCP00028187001;Dbxref=TAIR:AT5G59960.1,TrEMBL:C6TJD5,TrEMBL:G7JUS4,TrEMBL:I1LK44;Derives_from=GSCOCT00028187001;Name=Cc01_g12500;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028187001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: nucleus%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(913761..913838%2C913403..913487%2C911498..911691%2C911316..911398%2C910762..910807%2C910613..910669%2C910418..910472%2C910244..910344%2C910081..910144%2C909869..910002%2C908739..908912));owner=coffea | |
| 16764 chr1 manual_curation exon 31096103 31096451 . - . Parent=GSCOCT00028187001 | |
| 16765 chr1 manual_curation exon 31097408 31097541 . - . Parent=GSCOCT00028187001 | |
| 16766 chr1 manual_curation exon 31097620 31097683 . - . Parent=GSCOCT00028187001 | |
| 16767 chr1 manual_curation exon 31097783 31097883 . - . Parent=GSCOCT00028187001 | |
| 16768 chr1 manual_curation exon 31097957 31098011 . - . Parent=GSCOCT00028187001 | |
| 16769 chr1 manual_curation exon 31098152 31098208 . - . Parent=GSCOCT00028187001 | |
| 16770 chr1 manual_curation exon 31098301 31098346 . - . Parent=GSCOCT00028187001 | |
| 16771 chr1 manual_curation exon 31098855 31098937 . - . Parent=GSCOCT00028187001 | |
| 16772 chr1 manual_curation exon 31099037 31099230 . - . Parent=GSCOCT00028187001 | |
| 16773 chr1 manual_curation exon 31100942 31101026 . - . Parent=GSCOCT00028187001 | |
| 16774 chr1 manual_curation exon 31101300 31101755 . - . Parent=GSCOCT00028187001 | |
| 16775 chr1 manual_curation CDS 31096278 31096451 . - 0 Parent=GSCOCT00028187001 | |
| 16776 chr1 manual_curation CDS 31097408 31097541 . - 1 Parent=GSCOCT00028187001 | |
| 16777 chr1 manual_curation CDS 31097620 31097683 . - 0 Parent=GSCOCT00028187001 | |
| 16778 chr1 manual_curation CDS 31097783 31097883 . - 1 Parent=GSCOCT00028187001 | |
| 16779 chr1 manual_curation CDS 31097957 31098011 . - 0 Parent=GSCOCT00028187001 | |
| 16780 chr1 manual_curation CDS 31098152 31098208 . - 0 Parent=GSCOCT00028187001 | |
| 16781 chr1 manual_curation CDS 31098301 31098346 . - 2 Parent=GSCOCT00028187001 | |
| 16782 chr1 manual_curation CDS 31098855 31098937 . - 0 Parent=GSCOCT00028187001 | |
| 16783 chr1 manual_curation CDS 31099037 31099230 . - 1 Parent=GSCOCT00028187001 | |
| 16784 chr1 manual_curation CDS 31100942 31101026 . - 0 Parent=GSCOCT00028187001 | |
| 16785 chr1 manual_curation CDS 31101300 31101377 . - 0 Parent=GSCOCT00028187001 | |
| 16786 chr1 manual_curation gene 31103416 31106995 . - . ID=GSCOCG00028188001;Name=Cc01_g12510 | |
| 16787 chr1 manual_curation mRNA 31103416 31106995 . - . ID=GSCOCT00028188001;Parent=GSCOCG00028188001;Name=Cc01_g12510 | |
| 16788 chr1 manual_curation polypeptide 31103441 31106766 . - . ID=GSCOCP00028188001;Dbxref=TAIR:AT2G36840.1,TAIR:AT2G39570.1,TrEMBL:B9GER1,TrEMBL:D7SKJ2,TrEMBL:I1MDH3;Derives_from=GSCOCT00028188001;Name=Cc01_g12510;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:ACT domain-containing protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028188001~ ACT domain-containing protein~ unknown_gene~ complete;original_location=complement(join(919074..919227%2C918475..918693%2C918272..918377%2C917161..917512%2C916332..916616%2C915902..916048));owner=coffea | |
| 16789 chr1 manual_curation exon 31103416 31103587 . - . Parent=GSCOCT00028188001 | |
| 16790 chr1 manual_curation exon 31103871 31104155 . - . Parent=GSCOCT00028188001 | |
| 16791 chr1 manual_curation exon 31104700 31105051 . - . Parent=GSCOCT00028188001 | |
| 16792 chr1 manual_curation exon 31105811 31105916 . - . Parent=GSCOCT00028188001 | |
| 16793 chr1 manual_curation exon 31106014 31106232 . - . Parent=GSCOCT00028188001 | |
| 16794 chr1 manual_curation exon 31106613 31106995 . - . Parent=GSCOCT00028188001 | |
| 16795 chr1 manual_curation CDS 31103441 31103587 . - 0 Parent=GSCOCT00028188001 | |
| 16796 chr1 manual_curation CDS 31103871 31104155 . - 0 Parent=GSCOCT00028188001 | |
| 16797 chr1 manual_curation CDS 31104700 31105051 . - 2 Parent=GSCOCT00028188001 | |
| 16798 chr1 manual_curation CDS 31105811 31105916 . - 1 Parent=GSCOCT00028188001 | |
| 16799 chr1 manual_curation CDS 31106014 31106232 . - 1 Parent=GSCOCT00028188001 | |
| 16800 chr1 manual_curation CDS 31106613 31106766 . - 0 Parent=GSCOCT00028188001 | |
| 16801 chr1 manual_curation gene 31108451 31108762 . - . ID=GSCOCG00028190001;Name=Cc01_g12520 | |
| 16802 chr1 manual_curation mRNA 31108451 31108762 . - . ID=GSCOCT00028190001;Parent=GSCOCG00028190001;Name=Cc01_g12520 | |
| 16803 chr1 manual_curation polypeptide 31108451 31108762 . - . ID=GSCOCP00028190001;Dbxref=GENE3D:G3DSA:1.10.20.10,InterPro:IPR001951,InterPro:IPR007125,InterPro:IPR009072,InterPro:IPR019809,PANTHER:PTHR10484,PFAM:PF00125,PRINTS:PR00623,PROSITE:PS00047,SMART:SM00417,SUPERFAMILY:SSF47113,SwissProt:P0CG89,SwissProt:P62788,SwissProt:Q76H85,TAIR:AT3G46320.1,TAIR:AT5G59690.1,TAIR:AT5G59970.1,TrEMBL:Q7XUC9;Derives_from=GSCOCT00028190001;Name=Cc01_g12520;Ontology_term=CC_evidence_code:ISS,GO:0000786,GO:0003677,GO:0005634,GO:0006334,CC_EC_number:missing_EC_number,PRODUCT:Histone H4,CC_functional_completeness:complete,CC_gene:SlH4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028190001~ Histone H4~ SlH4~ complete;original_location=complement(920912..921223);owner=coffea | |
| 16804 chr1 manual_curation exon 31108451 31108762 . - . Parent=GSCOCT00028190001 | |
| 16805 chr1 manual_curation CDS 31108451 31108762 . - 0 Parent=GSCOCT00028190001 | |
| 16806 chr1 manual_curation gene 31111052 31112844 . + . ID=GSCOCG00028191001;Name=Cc01_g12530 | |
| 16807 chr1 manual_curation mRNA 31111052 31112844 . + . ID=GSCOCT00028191001;Parent=GSCOCG00028191001;Name=Cc01_g12530 | |
| 16808 chr1 manual_curation polypeptide 31111600 31112320 . + . ID=GSCOCP00028191001;Dbxref=InterPro:IPR000630,PANTHER:PTHR11758,PFAM:PF00410,PROSITE:PS00053,SUPERFAMILY:SSF56047,SwissProt:P42798,SwissProt:Q00332,SwissProt:Q9AT34,TAIR:AT1G07770.1,TAIR:AT3G46040.1,TAIR:AT5G59850.1,TrEMBL:B3TLN9,TrEMBL:G3MMZ3;Derives_from=GSCOCT00028191001;Name=Cc01_g12530;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:40S ribosomal protein S15a,CC_functional_completeness:complete,CC_gene:RPS15A,CC_gene:RPS15AA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028191001~ 40S ribosomal protein S15a~ RPS15A~ complete;original_location=join(924061..924193%2C924313..924473%2C924683..924781);owner=coffea | |
| 16809 chr1 manual_curation exon 31111052 31111175 . + . Parent=GSCOCT00028191001 | |
| 16810 chr1 manual_curation exon 31111582 31111732 . + . Parent=GSCOCT00028191001 | |
| 16811 chr1 manual_curation exon 31111852 31112012 . + . Parent=GSCOCT00028191001 | |
| 16812 chr1 manual_curation exon 31112222 31112844 . + . Parent=GSCOCT00028191001 | |
| 16813 chr1 manual_curation CDS 31111600 31111732 . + 0 Parent=GSCOCT00028191001 | |
| 16814 chr1 manual_curation CDS 31111852 31112012 . + 1 Parent=GSCOCT00028191001 | |
| 16815 chr1 manual_curation CDS 31112222 31112320 . + 0 Parent=GSCOCT00028191001 | |
| 16816 chr1 manual_curation gene 31113119 31114569 . - . ID=GSCOCG00028192001;Name=Cc01_g12540 | |
| 16817 chr1 manual_curation mRNA 31113119 31114569 . - . ID=GSCOCT00028192001;Parent=GSCOCG00028192001;Name=Cc01_g12540 | |
| 16818 chr1 manual_curation polypeptide 31113119 31113367 . - . ID=GSCOCP00028192001;Dbxref=InterPro:IPR000719,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR015746,InterPro:IPR017442,PANTHER:PTHR22985:SF93,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00108,SUPERFAMILY:SSF56112;Derives_from=GSCOCT00028192001;Name=Cc01_g12540;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028192001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(925580..925828);owner=coffea | |
| 16819 chr1 manual_curation exon 31113119 31114569 . - . Parent=GSCOCT00028192001 | |
| 16820 chr1 manual_curation CDS 31113119 31113367 . - 0 Parent=GSCOCT00028192001 | |
| 16821 chr1 manual_curation gene 31114647 31116766 . + . ID=GSCOCG00028193001;Name=Cc01_g12550 | |
| 16822 chr1 manual_curation mRNA 31114647 31116766 . + . ID=GSCOCT00028193001;Parent=GSCOCG00028193001;Name=Cc01_g12550 | |
| 16823 chr1 manual_curation polypeptide 31114728 31116526 . + . ID=GSCOCP00028193001;Dbxref=InterPro:IPR001810,InterPro:IPR006566,InterPro:IPR013101,InterPro:IPR013596,InterPro:IPR022364,PFAM:PF00646,PFAM:PF07723,PFAM:PF08387,PROFILE:PS50181,SMART:SM00256,SMART:SM00579,SUPERFAMILY:SSF81383,SwissProt:Q9FLA2,SwissProt:Q9FZ52,SwissProt:Q9LX47,TAIR:AT1G16930.1,TAIR:AT3G59240.1,TAIR:AT5G44950.1,TrEMBL:A5BLF6,TrEMBL:B9HZW5,TrEMBL:F6HR85;Derives_from=GSCOCT00028193001;Name=Cc01_g12550;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative F-box/FBD/LRR-repeat protein At3g59240,CC_functional_completeness:complete,CC_gene:At3g59240,CC_gene:At1g16930,CC_gene:At5g44950;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028193001~ Putative F-box/FBD/LRR-repeat protein At3g59240~ At3g59240~ complete;original_location=join(927189..928241%2C928376..928522%2C928640..928987);owner=coffea | |
| 16824 chr1 manual_curation exon 31114647 31115780 . + . Parent=GSCOCT00028193001 | |
| 16825 chr1 manual_curation exon 31115915 31116061 . + . Parent=GSCOCT00028193001 | |
| 16826 chr1 manual_curation exon 31116179 31116766 . + . Parent=GSCOCT00028193001 | |
| 16827 chr1 manual_curation CDS 31114728 31115780 . + 0 Parent=GSCOCT00028193001 | |
| 16828 chr1 manual_curation CDS 31115915 31116061 . + 0 Parent=GSCOCT00028193001 | |
| 16829 chr1 manual_curation CDS 31116179 31116526 . + 0 Parent=GSCOCT00028193001 | |
| 16830 chr1 manual_curation gene 31123927 31124752 . + . ID=GSCOCG00028194001;Name=Cc01_g12560 | |
| 16831 chr1 manual_curation mRNA 31123927 31124752 . + . ID=GSCOCT00028194001;Parent=GSCOCG00028194001;Name=Cc01_g12560 | |
| 16832 chr1 manual_curation polypeptide 31124003 31124394 . + . ID=GSCOCP00028194001;Derives_from=GSCOCT00028194001;Name=Cc01_g12560;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028194001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(936464..936604%2C936799..936855);owner=coffea | |
| 16833 chr1 manual_curation exon 31123927 31124143 . + . Parent=GSCOCT00028194001 | |
| 16834 chr1 manual_curation exon 31124338 31124752 . + . Parent=GSCOCT00028194001 | |
| 16835 chr1 manual_curation CDS 31124003 31124143 . + 0 Parent=GSCOCT00028194001 | |
| 16836 chr1 manual_curation CDS 31124338 31124394 . + 0 Parent=GSCOCT00028194001 | |
| 16837 chr1 manual_curation gene 31125583 31126958 . + . ID=GSCOCG00028195001;Name=Cc01_g12570 | |
| 16838 chr1 manual_curation mRNA 31125583 31126958 . + . ID=GSCOCT00028195001;Parent=GSCOCG00028195001;Name=Cc01_g12570 | |
| 16839 chr1 manual_curation polypeptide 31126339 31126624 . + . ID=GSCOCP00028195001;Dbxref=TAIR:AT3G46430.1,TAIR:AT5G59613.1,TrEMBL:A9PBX1,TrEMBL:D5FNB4,TrEMBL:G7JTP1;Derives_from=GSCOCT00028195001;Name=Cc01_g12570;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028195001~ unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46430.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(938800..938920%2C939018..939085);owner=coffea | |
| 16840 chr1 manual_curation exon 31125583 31126459 . + . Parent=GSCOCT00028195001 | |
| 16841 chr1 manual_curation exon 31126557 31126958 . + . Parent=GSCOCT00028195001 | |
| 16842 chr1 manual_curation CDS 31126339 31126459 . + 0 Parent=GSCOCT00028195001 | |
| 16843 chr1 manual_curation CDS 31126557 31126624 . + 1 Parent=GSCOCT00028195001 | |
| 16844 chr1 manual_curation gene 31129106 31135700 . - . ID=GSCOCG00028197001;Name=Cc01_g12580 | |
| 16845 chr1 manual_curation mRNA 31129106 31135700 . - . ID=GSCOCT00028197001;Parent=GSCOCG00028197001;Name=Cc01_g12580 | |
| 16846 chr1 manual_curation polypeptide 31129399 31134637 . - . ID=GSCOCP00028197001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR001509,InterPro:IPR016040,PFAM:PF01370,SwissProt:Q5R885,SwissProt:Q8NBZ7,SwissProt:Q91XL3,TAIR:AT2G28760.2,TAIR:AT3G46440.1,TAIR:AT5G59290.2,TrEMBL:B3VDY9,TrEMBL:B9SR17,TrEMBL:C6THA9;Derives_from=GSCOCT00028197001;Name=Cc01_g12580;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,GO:0044237,GO:0050662,CC_EC_number:4.1.1.35,PRODUCT:UDP-glucuronic acid decarboxylase 1,CC_functional_completeness:fragment,CC_gene:UXS1,CC_gene:Uxs1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028197001~ UDP-glucuronic acid decarboxylase 1~ UXS1~ fragment;original_location=complement(join(947009..947098%2C946103..946189%2C945774..945861%2C944890..944981%2C944226..944290%2C944056..944144%2C943735..943812%2C943561..943654%2C942970..943036%2C942810..942873%2C942671..942711%2C941860..942045));owner=coffea | |
| 16847 chr1 manual_curation exon 31129106 31129584 . - . Parent=GSCOCT00028197001 | |
| 16848 chr1 manual_curation exon 31130210 31130250 . - . Parent=GSCOCT00028197001 | |
| 16849 chr1 manual_curation exon 31130349 31130412 . - . Parent=GSCOCT00028197001 | |
| 16850 chr1 manual_curation exon 31130509 31130575 . - . Parent=GSCOCT00028197001 | |
| 16851 chr1 manual_curation exon 31131100 31131193 . - . Parent=GSCOCT00028197001 | |
| 16852 chr1 manual_curation exon 31131274 31131351 . - . Parent=GSCOCT00028197001 | |
| 16853 chr1 manual_curation exon 31131595 31131683 . - . Parent=GSCOCT00028197001 | |
| 16854 chr1 manual_curation exon 31131765 31131829 . - . Parent=GSCOCT00028197001 | |
| 16855 chr1 manual_curation exon 31132429 31132520 . - . Parent=GSCOCT00028197001 | |
| 16856 chr1 manual_curation exon 31133313 31133400 . - . Parent=GSCOCT00028197001 | |
| 16857 chr1 manual_curation exon 31133642 31133728 . - . Parent=GSCOCT00028197001 | |
| 16858 chr1 manual_curation exon 31134548 31135700 . - . Parent=GSCOCT00028197001 | |
| 16859 chr1 manual_curation CDS 31129399 31129584 . - 0 Parent=GSCOCT00028197001 | |
| 16860 chr1 manual_curation CDS 31130210 31130250 . - 1 Parent=GSCOCT00028197001 | |
| 16861 chr1 manual_curation CDS 31130349 31130412 . - 0 Parent=GSCOCT00028197001 | |
| 16862 chr1 manual_curation CDS 31130509 31130575 . - 2 Parent=GSCOCT00028197001 | |
| 16863 chr1 manual_curation CDS 31131100 31131193 . - 1 Parent=GSCOCT00028197001 | |
| 16864 chr1 manual_curation CDS 31131274 31131351 . - 1 Parent=GSCOCT00028197001 | |
| 16865 chr1 manual_curation CDS 31131595 31131683 . - 2 Parent=GSCOCT00028197001 | |
| 16866 chr1 manual_curation CDS 31131765 31131829 . - 0 Parent=GSCOCT00028197001 | |
| 16867 chr1 manual_curation CDS 31132429 31132520 . - 1 Parent=GSCOCT00028197001 | |
| 16868 chr1 manual_curation CDS 31133313 31133400 . - 0 Parent=GSCOCT00028197001 | |
| 16869 chr1 manual_curation CDS 31133642 31133728 . - 0 Parent=GSCOCT00028197001 | |
| 16870 chr1 manual_curation CDS 31134548 31134637 . - 0 Parent=GSCOCT00028197001 | |
| 16871 chr1 manual_curation gene 31141015 31144401 . - . ID=GSCOCG00028199001;Name=Cc01_g12590 | |
| 16872 chr1 manual_curation mRNA 31141015 31144401 . - . ID=GSCOCT00028199001;Parent=GSCOCG00028199001;Name=Cc01_g12590 | |
| 16873 chr1 manual_curation polypeptide 31141015 31144401 . - . ID=GSCOCP00028199001;Dbxref=InterPro:IPR006726,PFAM:PF04632,TAIR:AT2G28780.1,TAIR:AT3G09450.1,TrEMBL:B9HPJ6,TrEMBL:B9SZF1,TrEMBL:F6GV30;Derives_from=GSCOCT00028199001;Name=Cc01_g12590;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B INVOLVED IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028199001~ unknown protein%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: mitochondrion%3B EXPRESSED IN: inflorescence meristem%2C root%2C flower%3B EXPRESSED DURING: petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF939%2C bacterial (InterPro:IPR010343)%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09450.1)%3B Has 671 Blast hits to 667 proteins in 305 species: Archae - 0%3B Bacteria - 588%3B Metazoa - 0%3B Fungi - 2%3B Plants - 66%3B Viruses - 0%3B Other Eukaryotes - 15 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(956317..956862%2C955350..955517%2C953476..955239));owner=coffea | |
| 16874 chr1 manual_curation exon 31141015 31142778 . - . Parent=GSCOCT00028199001 | |
| 16875 chr1 manual_curation exon 31142889 31143056 . - . Parent=GSCOCT00028199001 | |
| 16876 chr1 manual_curation exon 31143856 31144401 . - . Parent=GSCOCT00028199001 | |
| 16877 chr1 manual_curation CDS 31141015 31142778 . - 0 Parent=GSCOCT00028199001 | |
| 16878 chr1 manual_curation CDS 31142889 31143056 . - 0 Parent=GSCOCT00028199001 | |
| 16879 chr1 manual_curation CDS 31143856 31144401 . - 0 Parent=GSCOCT00028199001 | |
| 16880 chr1 manual_curation gene 31162184 31168574 . - . ID=GSCOCG00028201001;Name=Cc01_g12600 | |
| 16881 chr1 manual_curation mRNA 31162184 31168574 . - . ID=GSCOCT00028201001;Parent=GSCOCG00028201001;Name=Cc01_g12600 | |
| 16882 chr1 manual_curation polypeptide 31162542 31167107 . - . ID=GSCOCP00028201001;Dbxref=GENE3D:G3DSA:3.40.525.10,InterPro:IPR001251,PFAM:PF00650,PROFILE:PS50191,SMART:SM00516,SUPERFAMILY:SSF52087,TAIR:AT3G46450.2,TrEMBL:A5BCS4,TrEMBL:D7SKI8,TrEMBL:I1MDG9;Derives_from=GSCOCT00028201001;Name=Cc01_g12600;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028201001~ Putative SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein~ unknown_gene~ complete;original_location=complement(join(979206..979568%2C978317..978483%2C977791..977886%2C976725..976981%2C975450..975670%2C975003..975353));owner=coffea | |
| 16883 chr1 manual_curation exon 31168126 31168574 . - . Parent=GSCOCT00028201001 | |
| 16884 chr1 manual_curation exon 31162184 31162892 . - . Parent=GSCOCT00028201001 | |
| 16885 chr1 manual_curation exon 31162989 31163209 . - . Parent=GSCOCT00028201001 | |
| 16886 chr1 manual_curation exon 31164264 31164520 . - . Parent=GSCOCT00028201001 | |
| 16887 chr1 manual_curation exon 31165330 31165425 . - . Parent=GSCOCT00028201001 | |
| 16888 chr1 manual_curation exon 31165856 31166022 . - . Parent=GSCOCT00028201001 | |
| 16889 chr1 manual_curation exon 31166745 31167171 . - . Parent=GSCOCT00028201001 | |
| 16890 chr1 manual_curation CDS 31162542 31162892 . - 0 Parent=GSCOCT00028201001 | |
| 16891 chr1 manual_curation CDS 31162989 31163209 . - 1 Parent=GSCOCT00028201001 | |
| 16892 chr1 manual_curation CDS 31164264 31164520 . - 2 Parent=GSCOCT00028201001 | |
| 16893 chr1 manual_curation CDS 31165330 31165425 . - 2 Parent=GSCOCT00028201001 | |
| 16894 chr1 manual_curation CDS 31165856 31166022 . - 0 Parent=GSCOCT00028201001 | |
| 16895 chr1 manual_curation CDS 31166745 31167107 . - 0 Parent=GSCOCT00028201001 | |
| 16896 chr1 manual_curation gene 31170368 31170629 . + . ID=GSCOCG00028202001;Name=Cc01_g12610 | |
| 16897 chr1 manual_curation mRNA 31170368 31170629 . + . ID=GSCOCT00028202001;Parent=GSCOCG00028202001;Name=Cc01_g12610 | |
| 16898 chr1 manual_curation polypeptide 31170408 31170629 . + . ID=GSCOCP00028202001;Dbxref=TAIR:AT1G07645.1,TrEMBL:B9SZE8,TrEMBL:D7KH42,TrEMBL:Q9LQP1;Derives_from=GSCOCT00028202001;Name=Cc01_g12610;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:dessication-induced 1VOC superfamily protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028202001~ dessication-induced 1VOC superfamily protein~ unknown_gene~ fragment;original_location=join(982869..982996%2C983069..983090);owner=coffea | |
| 16899 chr1 manual_curation exon 31170368 31170535 . + . Parent=GSCOCT00028202001 | |
| 16900 chr1 manual_curation exon 31170608 31170629 . + . Parent=GSCOCT00028202001 | |
| 16901 chr1 manual_curation CDS 31170408 31170535 . + 0 Parent=GSCOCT00028202001 | |
| 16902 chr1 manual_curation CDS 31170608 31170629 . + 2 Parent=GSCOCT00028202001 | |
| 16903 chr1 manual_curation gene 31170704 31171237 . + . ID=GSCOCG00028203001;Name=Cc01_g12620 | |
| 16904 chr1 manual_curation mRNA 31170704 31171237 . + . ID=GSCOCT00028203001;Parent=GSCOCG00028203001;Name=Cc01_g12620 | |
| 16905 chr1 manual_curation polypeptide 31170704 31171173 . + . ID=GSCOCP00028203001;Derives_from=GSCOCT00028203001;Name=Cc01_g12620;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028203001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(983165..983245%2C983458..983634);owner=coffea | |
| 16906 chr1 manual_curation exon 31170704 31170784 . + . Parent=GSCOCT00028203001 | |
| 16907 chr1 manual_curation exon 31170997 31171237 . + . Parent=GSCOCT00028203001 | |
| 16908 chr1 manual_curation CDS 31170704 31170784 . + 0 Parent=GSCOCT00028203001 | |
| 16909 chr1 manual_curation CDS 31170997 31171173 . + 0 Parent=GSCOCT00028203001 | |
| 16910 chr1 manual_curation gene 31172043 31176565 . - . ID=GSCOCG00028204001;Name=Cc01_g12630 | |
| 16911 chr1 manual_curation mRNA 31172043 31176565 . - . ID=GSCOCT00028204001;Parent=GSCOCG00028204001;Name=Cc01_g12630 | |
| 16912 chr1 manual_curation polypeptide 31172289 31176338 . - . ID=GSCOCP00028204001;Dbxref=GENE3D:G3DSA:3.10.110.10,InterPro:IPR000608,InterPro:IPR016135,PFAM:PF00179,PROFILE:PS50127,PROSITE:PS00183,SMART:SM00212,SUPERFAMILY:SSF54495,SwissProt:P42747,SwissProt:Q42540,SwissProt:Q42541,TAIR:AT3G46460.1,TAIR:AT3G55380.2,TAIR:AT5G59300.1,TrEMBL:A9P8A7,TrEMBL:B9HTJ9,TrEMBL:F2DSA1;Derives_from=GSCOCT00028204001;Name=Cc01_g12630;Ontology_term=CC_evidence_code:ISS,GO:0019787,GO:0043687,GO:0051246,CC_EC_number:6.3.2.19,PRODUCT:Ubiquitin-conjugating enzyme E2 7,CC_functional_completeness:complete,CC_gene:UBC7,CC_gene:UBC13,CC_gene:UBC14;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028204001~ Ubiquitin-conjugating enzyme E2 7~ UBC7~ complete;original_location=complement(join(988757..988799%2C988517..988619%2C987530..987627%2C987337..987437%2C986443..986520%2C984750..984827));owner=coffea | |
| 16913 chr1 manual_curation exon 31172043 31172366 . - . Parent=GSCOCT00028204001 | |
| 16914 chr1 manual_curation exon 31173982 31174059 . - . Parent=GSCOCT00028204001 | |
| 16915 chr1 manual_curation exon 31174876 31174976 . - . Parent=GSCOCT00028204001 | |
| 16916 chr1 manual_curation exon 31175069 31175166 . - . Parent=GSCOCT00028204001 | |
| 16917 chr1 manual_curation exon 31176056 31176158 . - . Parent=GSCOCT00028204001 | |
| 16918 chr1 manual_curation exon 31176296 31176565 . - . Parent=GSCOCT00028204001 | |
| 16919 chr1 manual_curation CDS 31172289 31172366 . - 0 Parent=GSCOCT00028204001 | |
| 16920 chr1 manual_curation CDS 31173982 31174059 . - 0 Parent=GSCOCT00028204001 | |
| 16921 chr1 manual_curation CDS 31174876 31174976 . - 1 Parent=GSCOCT00028204001 | |
| 16922 chr1 manual_curation CDS 31175069 31175166 . - 2 Parent=GSCOCT00028204001 | |
| 16923 chr1 manual_curation CDS 31176056 31176158 . - 1 Parent=GSCOCT00028204001 | |
| 16924 chr1 manual_curation CDS 31176296 31176338 . - 0 Parent=GSCOCT00028204001 | |
| 16925 chr1 manual_curation gene 31187390 31188142 . - . ID=GSCOCG00028206001;Name=Cc01_g12640 | |
| 16926 chr1 manual_curation mRNA 31187390 31188142 . - . ID=GSCOCT00028206001;Parent=GSCOCG00028206001;Name=Cc01_g12640 | |
| 16927 chr1 manual_curation polypeptide 31187390 31188142 . - . ID=GSCOCP00028206001;Dbxref=GENE3D:G3DSA:2.60.110.10,InterPro:IPR001938,PFAM:PF00314,PIR:PIRSF002703,PRINTS:PR00347,PROFILE:PS51367,SMART:SM00205,SUPERFAMILY:SSF49870,SwissProt:P50699,SwissProt:P83332,SwissProt:Q41350,TAIR:AT2G28790.1,TAIR:AT4G38660.1,TAIR:AT5G40020.1,TrEMBL:A5BCS2,TrEMBL:B9SZE5,TrEMBL:D2KU75;Derives_from=GSCOCT00028206001;Name=Cc01_g12640;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Osmotin-like protein,CC_functional_completeness:complete,CC_gene:At1g18250;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028206001~ Osmotin-like protein~ At1g18250~ complete;original_location=complement(999851..1000603);owner=coffea | |
| 16928 chr1 manual_curation exon 31187390 31188142 . - . Parent=GSCOCT00028206001 | |
| 16929 chr1 manual_curation CDS 31187390 31188142 . - 0 Parent=GSCOCT00028206001 | |
| 16930 chr1 manual_curation gene 31194117 31195446 . + . ID=GSCOCG00028207001;Name=Cc01_g12650 | |
| 16931 chr1 manual_curation mRNA 31194117 31195446 . + . ID=GSCOCT00028207001;Parent=GSCOCG00028207001;Name=Cc01_g12650 | |
| 16932 chr1 manual_curation polypeptide 31194237 31194775 . + . ID=GSCOCP00028207001;Derives_from=GSCOCT00028207001;Name=Cc01_g12650;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028207001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(1006698..1006803%2C1006980..1007047%2C1007159..1007236);owner=coffea | |
| 16933 chr1 manual_curation exon 31194117 31194342 . + . Parent=GSCOCT00028207001 | |
| 16934 chr1 manual_curation exon 31194519 31194586 . + . Parent=GSCOCT00028207001 | |
| 16935 chr1 manual_curation exon 31194698 31195446 . + . Parent=GSCOCT00028207001 | |
| 16936 chr1 manual_curation CDS 31194237 31194342 . + 0 Parent=GSCOCT00028207001 | |
| 16937 chr1 manual_curation CDS 31194519 31194586 . + 1 Parent=GSCOCT00028207001 | |
| 16938 chr1 manual_curation CDS 31194698 31194775 . + 0 Parent=GSCOCT00028207001 | |
| 16939 chr1 manual_curation gene 31195527 31200855 . - . ID=GSCOCG00028208001;Name=Cc01_g12660 | |
| 16940 chr1 manual_curation mRNA 31195527 31200855 . - . ID=GSCOCT00028208001;Parent=GSCOCG00028208001;Name=Cc01_g12660 | |
| 16941 chr1 manual_curation polypeptide 31195632 31200646 . - . ID=GSCOCP00028208001;Dbxref=InterPro:IPR001708,InterPro:IPR020001,PANTHER:PTHR12428,PFAM:PF02096,SwissProt:Q8LBP4,SwissProt:Q9FY06,SwissProt:Q9FYL3,TAIR:AT1G24490.1,TAIR:AT2G28800.1,TIGRFAMs:TIGR03592,TrEMBL:B9GJQ3,TrEMBL:F6GV27,TrEMBL:I1LK36;Derives_from=GSCOCT00028208001;Name=Cc01_g12660;Ontology_term=CC_evidence_code:ISS,GO:0016021,GO:0051205,CC_EC_number:missing_EC_number,PRODUCT:Inner membrane protein PPF-1%2C chloroplastic,CC_functional_completeness:complete,CC_gene:PPF-1,CC_gene:ALB3,CC_gene:ALB3L1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028208001~ Inner membrane protein PPF-1%2C chloroplastic~ PPF-1~ complete;original_location=complement(join(1012778..1013107%2C1012085..1012195%2C1011814..1011888%2C1011607..1011667%2C1011034..1011107%2C1010822..1010926%2C1010511..1010618%2C1010325..1010428%2C1009468..1009617%2C1009255..1009381%2C1008093..1008200));owner=coffea | |
| 16942 chr1 manual_curation exon 31195527 31195739 . - . Parent=GSCOCT00028208001 | |
| 16943 chr1 manual_curation exon 31196794 31196920 . - . Parent=GSCOCT00028208001 | |
| 16944 chr1 manual_curation exon 31197007 31197156 . - . Parent=GSCOCT00028208001 | |
| 16945 chr1 manual_curation exon 31197864 31197967 . - . Parent=GSCOCT00028208001 | |
| 16946 chr1 manual_curation exon 31198050 31198157 . - . Parent=GSCOCT00028208001 | |
| 16947 chr1 manual_curation exon 31198361 31198465 . - . Parent=GSCOCT00028208001 | |
| 16948 chr1 manual_curation exon 31198573 31198646 . - . Parent=GSCOCT00028208001 | |
| 16949 chr1 manual_curation exon 31199146 31199206 . - . Parent=GSCOCT00028208001 | |
| 16950 chr1 manual_curation exon 31199353 31199427 . - . Parent=GSCOCT00028208001 | |
| 16951 chr1 manual_curation exon 31199624 31199734 . - . Parent=GSCOCT00028208001 | |
| 16952 chr1 manual_curation exon 31200317 31200855 . - . Parent=GSCOCT00028208001 | |
| 16953 chr1 manual_curation CDS 31195632 31195739 . - 0 Parent=GSCOCT00028208001 | |
| 16954 chr1 manual_curation CDS 31196794 31196920 . - 2 Parent=GSCOCT00028208001 | |
| 16955 chr1 manual_curation CDS 31197007 31197156 . - 2 Parent=GSCOCT00028208001 | |
| 16956 chr1 manual_curation CDS 31197864 31197967 . - 0 Parent=GSCOCT00028208001 | |
| 16957 chr1 manual_curation CDS 31198050 31198157 . - 0 Parent=GSCOCT00028208001 | |
| 16958 chr1 manual_curation CDS 31198361 31198465 . - 0 Parent=GSCOCT00028208001 | |
| 16959 chr1 manual_curation CDS 31198573 31198646 . - 1 Parent=GSCOCT00028208001 | |
| 16960 chr1 manual_curation CDS 31199146 31199206 . - 0 Parent=GSCOCT00028208001 | |
| 16961 chr1 manual_curation CDS 31199353 31199427 . - 0 Parent=GSCOCT00028208001 | |
| 16962 chr1 manual_curation CDS 31199624 31199734 . - 0 Parent=GSCOCT00028208001 | |
| 16963 chr1 manual_curation CDS 31200317 31200646 . - 0 Parent=GSCOCT00028208001 | |
| 16964 chr1 manual_curation gene 31203835 31206795 . + . ID=GSCOCG00028209001;Name=Cc01_g12670 | |
| 16965 chr1 manual_curation mRNA 31203835 31206795 . + . ID=GSCOCT00028209001;Parent=GSCOCG00028209001;Name=Cc01_g12670 | |
| 16966 chr1 manual_curation polypeptide 31203957 31206440 . + . ID=GSCOCP00028209001;Dbxref=InterPro:IPR001023,InterPro:IPR013126,InterPro:IPR018181,PANTHER:PTHR19375,PFAM:PF00012,PRINTS:PR00301,PROSITE:PS00297,PROSITE:PS00329,SwissProt:P09189,SwissProt:P22953,SwissProt:P27322,TAIR:AT3G09440.1,TAIR:AT3G12580.1,TAIR:AT5G02500.1,TrEMBL:B9HMG2,TrEMBL:B9NBF3,TrEMBL:D2D321;Derives_from=GSCOCT00028209001;Name=Cc01_g12670;Ontology_term=CC_evidence_code:ISS,GO:0005524,CC_EC_number:missing_EC_number,PRODUCT:Heat shock cognate 70 kDa protein,CC_functional_completeness:complete,CC_gene:HSP70,CC_gene:HSP70-1,CC_gene:HSC-2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028209001~ Heat shock cognate 70 kDa protein~ HSP70~ complete;original_location=join(1016418..1016631%2C1017163..1018901);owner=coffea | |
| 16967 chr1 manual_curation exon 31203835 31204170 . + . Parent=GSCOCT00028209001 | |
| 16968 chr1 manual_curation exon 31204702 31206795 . + . Parent=GSCOCT00028209001 | |
| 16969 chr1 manual_curation CDS 31203957 31204170 . + 0 Parent=GSCOCT00028209001 | |
| 16970 chr1 manual_curation CDS 31204702 31206440 . + 1 Parent=GSCOCT00028209001 | |
| 16971 chr1 manual_curation gene 31207650 31209662 . - . ID=GSCOCG00028210001;Name=Cc01_g12680 | |
| 16972 chr1 manual_curation mRNA 31207650 31209662 . - . ID=GSCOCT00028210001;Parent=GSCOCG00028210001;Name=Cc01_g12680 | |
| 16973 chr1 manual_curation polypeptide 31207650 31209140 . - . ID=GSCOCP00028210001;Dbxref=InterPro:IPR002068,InterPro:IPR008978,PROFILE:PS01031,SUPERFAMILY:SSF49764,TAIR:AT2G37570.1,TAIR:AT3G12570.1,TAIR:AT5G02480.1,TrEMBL:B9SP16,TrEMBL:F6GV25,TrEMBL:F6HLD7;Derives_from=GSCOCT00028210001;Name=Cc01_g12680;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:HSP20-like chaperones superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028210001~ HSP20-like chaperones superfamily protein~ unknown_gene~ complete;original_location=complement(1020111..1021601);owner=coffea | |
| 16974 chr1 manual_curation exon 31209538 31209662 . - . Parent=GSCOCT00028210001 | |
| 16975 chr1 manual_curation exon 31207650 31209390 . - . Parent=GSCOCT00028210001 | |
| 16976 chr1 manual_curation CDS 31207650 31209140 . - 0 Parent=GSCOCT00028210001 | |
| 16977 chr1 manual_curation gene 31214688 31216047 . - . ID=GSCOCG00028211001;Name=Cc01_g12690 | |
| 16978 chr1 manual_curation mRNA 31214688 31216047 . - . ID=GSCOCT00028211001;Parent=GSCOCG00028211001;Name=Cc01_g12690 | |
| 16979 chr1 manual_curation polypeptide 31214688 31216047 . - . ID=GSCOCP00028211001;Dbxref=InterPro:IPR001356,InterPro:IPR009057,PFAM:PF00046,PROFILE:PS50071,SMART:SM00389,SUPERFAMILY:SSF46689,SwissProt:A2WWU7,SwissProt:Q6X7K1,SwissProt:Q8LR86,TAIR:AT1G46480.1,TAIR:AT3G18010.1,TAIR:AT5G59340.1,TrEMBL:B9GJQ1,TrEMBL:B9SZE2,TrEMBL:C0IN08;Derives_from=GSCOCT00028211001;Name=Cc01_g12690;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0043565,CC_EC_number:missing_EC_number,PRODUCT:Putative WUSCHEL-related homeobox 2,CC_functional_completeness:complete,CC_gene:WOX2,CC_gene:WOX5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028211001~ Putative WUSCHEL-related homeobox 2~ WOX2~ complete;original_location=complement(join(1028196..1028508%2C1027478..1027618%2C1027149..1027408));owner=coffea | |
| 16980 chr1 manual_curation exon 31214688 31214947 . - . Parent=GSCOCT00028211001 | |
| 16981 chr1 manual_curation exon 31215017 31215157 . - . Parent=GSCOCT00028211001 | |
| 16982 chr1 manual_curation exon 31215735 31216047 . - . Parent=GSCOCT00028211001 | |
| 16983 chr1 manual_curation CDS 31214688 31214947 . - 1 Parent=GSCOCT00028211001 | |
| 16984 chr1 manual_curation CDS 31215017 31215157 . - 1 Parent=GSCOCT00028211001 | |
| 16985 chr1 manual_curation CDS 31215735 31216047 . - 0 Parent=GSCOCT00028211001 | |
| 16986 chr1 manual_curation gene 31220349 31222553 . + . ID=GSCOCG00028212001;Name=Cc01_g12700 | |
| 16987 chr1 manual_curation mRNA 31220349 31222553 . + . ID=GSCOCT00028212001;Parent=GSCOCG00028212001;Name=Cc01_g12700 | |
| 16988 chr1 manual_curation polypeptide 31220764 31221714 . + . ID=GSCOCP00028212001;Dbxref=TAIR:AT5G59350.1,TrEMBL:A5AT40,TrEMBL:B9GJP8,TrEMBL:B9HPI8;Derives_from=GSCOCT00028212001;Name=Cc01_g12700;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028212001~ Putative unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).~ unknown_gene~ complete;original_location=1033225..1034175;owner=coffea | |
| 16989 chr1 manual_curation exon 31220349 31222553 . + . Parent=GSCOCT00028212001 | |
| 16990 chr1 manual_curation CDS 31220764 31221714 . + 0 Parent=GSCOCT00028212001 | |
| 16991 chr1 manual_curation gene 31230677 31231420 . + . ID=GSCOCG00028213001;Name=Cc01_g12710 | |
| 16992 chr1 manual_curation mRNA 31230677 31231420 . + . ID=GSCOCT00028213001;Parent=GSCOCG00028213001;Name=Cc01_g12710 | |
| 16993 chr1 manual_curation polypeptide 31230702 31231072 . + . ID=GSCOCP00028213001;Dbxref=TAIR:AT1G47278.2,TrEMBL:C6T5H6,TrEMBL:D7SKH9,TrEMBL:I1KRK7;Derives_from=GSCOCT00028213001;Name=Cc01_g12710;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028213001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B Has 37 Blast hits to 37 proteins in 14 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 36%3B Viruses - 0%3B Other Eukaryotes - 1 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(1043163..1043333%2C1043462..1043533);owner=coffea | |
| 16994 chr1 manual_curation exon 31230677 31230872 . + . Parent=GSCOCT00028213001 | |
| 16995 chr1 manual_curation exon 31231001 31231420 . + . Parent=GSCOCT00028213001 | |
| 16996 chr1 manual_curation CDS 31230702 31230872 . + 0 Parent=GSCOCT00028213001 | |
| 16997 chr1 manual_curation CDS 31231001 31231072 . + 0 Parent=GSCOCT00028213001 | |
| 16998 chr1 manual_curation gene 31232712 31235756 . - . ID=GSCOCG00028216001;Name=Cc01_g12720 | |
| 16999 chr1 manual_curation mRNA 31232712 31235756 . - . ID=GSCOCT00028216001;Parent=GSCOCG00028216001;Name=Cc01_g12720 | |
| 17000 chr1 manual_curation polypeptide 31232712 31235649 . - . ID=GSCOCP00028216001;Dbxref=InterPro:IPR001023,InterPro:IPR013126,InterPro:IPR018181,PANTHER:PTHR19375,PFAM:PF00012,PRINTS:PR00301,PROSITE:PS00297,PROSITE:PS00329,PROSITE:PS01036,SwissProt:P09189,SwissProt:P24629,SwissProt:P27322,TAIR:AT3G09440.1,TAIR:AT3G12580.1,TAIR:AT5G02500.1,TrEMBL:A5C0Z3,TrEMBL:B9HMG2,TrEMBL:D2D321;Derives_from=GSCOCT00028216001;Name=Cc01_g12720;Ontology_term=CC_evidence_code:ISS,GO:0005524,CC_EC_number:missing_EC_number,PRODUCT:Heat shock cognate 70 kDa protein,CC_functional_completeness:complete,CC_gene:HSP70,CC_gene:HSC-I,CC_gene:HSC-2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028216001~ Heat shock cognate 70 kDa protein~ HSP70~ complete;original_location=complement(join(1047897..1048110%2C1045173..1046908));owner=coffea | |
| 17001 chr1 manual_curation exon 31232712 31234447 . - . Parent=GSCOCT00028216001 | |
| 17002 chr1 manual_curation exon 31235436 31235756 . - . Parent=GSCOCT00028216001 | |
| 17003 chr1 manual_curation CDS 31232712 31234447 . - 1 Parent=GSCOCT00028216001 | |
| 17004 chr1 manual_curation CDS 31235436 31235649 . - 0 Parent=GSCOCT00028216001 | |
| 17005 chr1 manual_curation gene 31245653 31247279 . + . ID=GSCOCG00028217001;Name=Cc01_g12730 | |
| 17006 chr1 manual_curation mRNA 31245653 31247279 . + . ID=GSCOCT00028217001;Parent=GSCOCG00028217001;Name=Cc01_g12730 | |
| 17007 chr1 manual_curation polypeptide 31245653 31246860 . + . ID=GSCOCP00028217001;Dbxref=InterPro:IPR003851,PFAM:PF02701,PRODOM:PD007478,PROFILE:PS50884,PROSITE:PS01361,SwissProt:O80928,SwissProt:Q9LZ56,SwissProt:Q9M2U1,TAIR:AT2G37590.1,TAIR:AT3G55370.3,TAIR:AT5G02460.1,TrEMBL:A5AJG0,TrEMBL:B9GJP7,TrEMBL:F6GV23;Derives_from=GSCOCT00028217001;Name=Cc01_g12730;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0008270,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative Dof zinc finger protein DOF3.6,CC_functional_completeness:complete,CC_gene:DOF3.6,CC_gene:DOF2.4,CC_gene:DOF5.1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028217001~ Putative Dof zinc finger protein DOF3.6~ DOF3.6~ complete;original_location=join(1058114..1058164%2C1058392..1059136%2C1059197..1059321);owner=coffea | |
| 17008 chr1 manual_curation exon 31245653 31245703 . + . Parent=GSCOCT00028217001 | |
| 17009 chr1 manual_curation exon 31245931 31246675 . + . Parent=GSCOCT00028217001 | |
| 17010 chr1 manual_curation exon 31246736 31247279 . + . Parent=GSCOCT00028217001 | |
| 17011 chr1 manual_curation CDS 31245653 31245703 . + 0 Parent=GSCOCT00028217001 | |
| 17012 chr1 manual_curation CDS 31245931 31246675 . + 0 Parent=GSCOCT00028217001 | |
| 17013 chr1 manual_curation CDS 31246736 31246860 . + 1 Parent=GSCOCT00028217001 | |
| 17014 chr1 manual_curation gene 31252896 31258646 . - . ID=GSCOCG00028219001;Name=Cc01_g12740 | |
| 17015 chr1 manual_curation mRNA 31252896 31258646 . - . ID=GSCOCT00028219001;Parent=GSCOCG00028219001;Name=Cc01_g12740 | |
| 17016 chr1 manual_curation polypeptide 31252896 31258332 . - . ID=GSCOCP00028219001;Dbxref=GENE3D:G3DSA:1.25.10.10,InterPro:IPR000225,InterPro:IPR003613,InterPro:IPR011989,InterPro:IPR016024,PFAM:PF00514,PFAM:PF04564,PROFILE:PS50176,SMART:SM00185,SMART:SM00504,SUPERFAMILY:SSF48371,SwissProt:Q0IMG9,SwissProt:Q9SNC6,SwissProt:Q9ZV31,TAIR:AT2G28830.1,TAIR:AT3G46510.1,TAIR:AT3G54850.1,TrEMBL:B9HPI5,TrEMBL:B9T786,TrEMBL:F6GV22;Derives_from=GSCOCT00028219001;Name=Cc01_g12740;Ontology_term=CC_evidence_code:ISS,GO:0000151,GO:0004842,GO:0005488,GO:0016567,CC_EC_number:missing_EC_number,PRODUCT:U-box domain-containing protein 13,CC_functional_completeness:complete,CC_gene:PUB13,CC_gene:PUB12,CC_gene:SPL11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028219001~ U-box domain-containing protein 13~ PUB13~ complete;original_location=complement(join(1070524..1070793%2C1068102..1068218%2C1067306..1067740%2C1065357..1066511));owner=coffea | |
| 17017 chr1 manual_curation exon 31252896 31254050 . - . Parent=GSCOCT00028219001 | |
| 17018 chr1 manual_curation exon 31254845 31255279 . - . Parent=GSCOCT00028219001 | |
| 17019 chr1 manual_curation exon 31255641 31255757 . - . Parent=GSCOCT00028219001 | |
| 17020 chr1 manual_curation exon 31258063 31258646 . - . Parent=GSCOCT00028219001 | |
| 17021 chr1 manual_curation CDS 31252896 31254050 . - 0 Parent=GSCOCT00028219001 | |
| 17022 chr1 manual_curation CDS 31254845 31255279 . - 0 Parent=GSCOCT00028219001 | |
| 17023 chr1 manual_curation CDS 31255641 31255757 . - 0 Parent=GSCOCT00028219001 | |
| 17024 chr1 manual_curation CDS 31258063 31258332 . - 0 Parent=GSCOCT00028219001 | |
| 17025 chr1 manual_curation gene 31272498 31272980 . - . ID=GSCOCG00028220001;Name=Cc01_g12750 | |
| 17026 chr1 manual_curation mRNA 31272498 31272980 . - . ID=GSCOCT00028220001;Parent=GSCOCG00028220001;Name=Cc01_g12750 | |
| 17027 chr1 manual_curation polypeptide 31272498 31272980 . - . ID=GSCOCP00028220001;Dbxref=InterPro:IPR002068,InterPro:IPR008978,PFAM:PF00011,PROFILE:PS01031,SUPERFAMILY:SSF49764,SwissProt:P05478,SwissProt:P13853,SwissProt:P27880,TAIR:AT1G53540.1,TAIR:AT3G46230.1,TAIR:AT5G59720.1,TrEMBL:H6TB47,TrEMBL:Q6WHC0,TrEMBL:Q9LPG9;Derives_from=GSCOCT00028220001;Name=Cc01_g12750;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:17.6 kDa class I heat shock protein 3,CC_functional_completeness:complete,CC_gene:HSP17.6C,CC_gene:HSP18.5-C,CC_gene:HSP18.2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028220001~ 17.6 kDa class I heat shock protein 3~ HSP17.6C~ complete;original_location=complement(1084959..1085441);owner=coffea | |
| 17028 chr1 manual_curation exon 31272498 31272980 . - . Parent=GSCOCT00028220001 | |
| 17029 chr1 manual_curation CDS 31272498 31272980 . - 0 Parent=GSCOCT00028220001 | |
| 17030 chr1 manual_curation gene 31283489 31287373 . + . ID=GSCOCG00028221001;Name=Cc01_g12760 | |
| 17031 chr1 manual_curation mRNA 31283489 31287373 . + . ID=GSCOCT00028221001;Parent=GSCOCG00028221001;Name=Cc01_g12760 | |
| 17032 chr1 manual_curation polypeptide 31283849 31286705 . + . ID=GSCOCP00028221001;Dbxref=GENE3D:G3DSA:1.25.40.20,InterPro:IPR001841,InterPro:IPR002110,InterPro:IPR020683,PFAM:PF00023,PROFILE:PS50088,PROFILE:PS50089,PROFILE:PS50297,SMART:SM00248,SUPERFAMILY:SSF48403,SwissProt:Q65XV2,SwissProt:Q94B55,SwissProt:Q94CT7,TAIR:AT2G28840.1,TAIR:AT5G07270.1,TAIR:AT5G57740.1,TrEMBL:B9GJP4,TrEMBL:G8Z251,TrEMBL:G8Z262;Derives_from=GSCOCT00028221001;Name=Cc01_g12760;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative E3 ubiquitin-protein ligase XBAT31,CC_functional_completeness:complete,CC_gene:XBAT31,CC_gene:XB3,CC_gene:XBOS31;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028221001~ Putative E3 ubiquitin-protein ligase XBAT31~ XBAT31~ complete;original_location=join(1096310..1096486%2C1096571..1096630%2C1096805..1096876%2C1097015..1097136%2C1097245..1097385%2C1097462..1097569%2C1098080..1098338%2C1098765..1099166);owner=coffea | |
| 17033 chr1 manual_curation exon 31283489 31284025 . + . Parent=GSCOCT00028221001 | |
| 17034 chr1 manual_curation exon 31284110 31284169 . + . Parent=GSCOCT00028221001 | |
| 17035 chr1 manual_curation exon 31284344 31284415 . + . Parent=GSCOCT00028221001 | |
| 17036 chr1 manual_curation exon 31284554 31284675 . + . Parent=GSCOCT00028221001 | |
| 17037 chr1 manual_curation exon 31284784 31284924 . + . Parent=GSCOCT00028221001 | |
| 17038 chr1 manual_curation exon 31285001 31285108 . + . Parent=GSCOCT00028221001 | |
| 17039 chr1 manual_curation exon 31285619 31285877 . + . Parent=GSCOCT00028221001 | |
| 17040 chr1 manual_curation exon 31286304 31287373 . + . Parent=GSCOCT00028221001 | |
| 17041 chr1 manual_curation CDS 31283849 31284025 . + 0 Parent=GSCOCT00028221001 | |
| 17042 chr1 manual_curation CDS 31284110 31284169 . + 0 Parent=GSCOCT00028221001 | |
| 17043 chr1 manual_curation CDS 31284344 31284415 . + 0 Parent=GSCOCT00028221001 | |
| 17044 chr1 manual_curation CDS 31284554 31284675 . + 0 Parent=GSCOCT00028221001 | |
| 17045 chr1 manual_curation CDS 31284784 31284924 . + 2 Parent=GSCOCT00028221001 | |
| 17046 chr1 manual_curation CDS 31285001 31285108 . + 2 Parent=GSCOCT00028221001 | |
| 17047 chr1 manual_curation CDS 31285619 31285877 . + 2 Parent=GSCOCT00028221001 | |
| 17048 chr1 manual_curation CDS 31286304 31286705 . + 0 Parent=GSCOCT00028221001 | |
| 17049 chr1 manual_curation gene 31312438 31316014 . + . ID=GSCOCG00028226001;Name=Cc01_g12770 | |
| 17050 chr1 manual_curation mRNA 31312438 31316014 . + . ID=GSCOCT00028226001;Parent=GSCOCG00028226001;Name=Cc01_g12770 | |
| 17051 chr1 manual_curation polypeptide 31313406 31315754 . + . ID=GSCOCP00028226001;Dbxref=InterPro:IPR004000,InterPro:IPR004001,InterPro:IPR020902,PANTHER:PTHR11937,PFAM:PF00022,PRINTS:PR00190,PROSITE:PS00406,PROSITE:PS00432,PROSITE:PS01132,SMART:SM00268,SwissProt:P30167,SwissProt:P53496,SwissProt:Q10DV7,TAIR:AT2G37620.1,TAIR:AT3G12110.1,TAIR:AT3G53750.1,TrEMBL:G7L017,TrEMBL:P93775,TrEMBL:Q9SAR7;Derives_from=GSCOCT00028226001;Name=Cc01_g12770;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0005524,CC_EC_number:missing_EC_number,PRODUCT:Actin-11,CC_functional_completeness:complete,CC_gene:ACT11,CC_gene:AC58,CC_gene:ACT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028226001~ Actin-11~ ACT11~ complete;original_location=join(1125867..1125926%2C1126053..1126446%2C1126994..1127607%2C1128150..1128215);owner=coffea | |
| 17052 chr1 manual_curation exon 31312438 31312752 . + . Parent=GSCOCT00028226001 | |
| 17053 chr1 manual_curation exon 31313393 31313465 . + . Parent=GSCOCT00028226001 | |
| 17054 chr1 manual_curation exon 31313592 31313985 . + . Parent=GSCOCT00028226001 | |
| 17055 chr1 manual_curation exon 31314533 31315146 . + . Parent=GSCOCT00028226001 | |
| 17056 chr1 manual_curation exon 31315689 31316014 . + . Parent=GSCOCT00028226001 | |
| 17057 chr1 manual_curation CDS 31313406 31313465 . + 0 Parent=GSCOCT00028226001 | |
| 17058 chr1 manual_curation CDS 31313592 31313985 . + 0 Parent=GSCOCT00028226001 | |
| 17059 chr1 manual_curation CDS 31314533 31315146 . + 1 Parent=GSCOCT00028226001 | |
| 17060 chr1 manual_curation CDS 31315689 31315754 . + 0 Parent=GSCOCT00028226001 | |
| 17061 chr1 manual_curation gene 31319408 31324848 . + . ID=GSCOCG00028227001;Name=Cc01_g12780 | |
| 17062 chr1 manual_curation mRNA 31319408 31324848 . + . ID=GSCOCT00028227001;Parent=GSCOCG00028227001;Name=Cc01_g12780 | |
| 17063 chr1 manual_curation polypeptide 31319488 31324431 . + . ID=GSCOCP00028227001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR003613,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF04564,PROFILE:PS50011,PROSITE:PS00107,SMART:SM00219,SMART:SM00220,SMART:SM00504,SUPERFAMILY:SSF56112,SwissProt:Q8GUH1,SwissProt:Q94A51,SwissProt:Q9SW11,TAIR:AT2G45910.1,TAIR:AT3G49060.1,TAIR:AT4G25160.1,TrEMBL:B9T790,TrEMBL:F6GV18,TrEMBL:I1MDF7;Derives_from=GSCOCT00028227001;Name=Cc01_g12780;Ontology_term=CC_evidence_code:ISS,GO:0000151,GO:0004672,GO:0004674,GO:0004842,GO:0005524,GO:0006468,GO:0016567,CC_EC_number:2.7.10.2,CC_EC_number:2.7.10.2,PRODUCT:Putative U-box domain-containing protein 33,CC_functional_completeness:complete,CC_gene:PUB33,CC_gene:PUB32,CC_gene:PUB35;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028227001~ Putative U-box domain-containing protein 33~ PUB33~ complete;original_location=join(1131949..1132234%2C1132772..1132890%2C1133429..1133535%2C1133783..1134353%2C1134920..1135471%2C1135663..1136385%2C1136710..1136892);owner=coffea | |
| 17064 chr1 manual_curation exon 31319408 31319773 . + . Parent=GSCOCT00028227001 | |
| 17065 chr1 manual_curation exon 31320311 31320429 . + . Parent=GSCOCT00028227001 | |
| 17066 chr1 manual_curation exon 31320968 31321074 . + . Parent=GSCOCT00028227001 | |
| 17067 chr1 manual_curation exon 31321322 31321892 . + . Parent=GSCOCT00028227001 | |
| 17068 chr1 manual_curation exon 31322459 31323010 . + . Parent=GSCOCT00028227001 | |
| 17069 chr1 manual_curation exon 31323202 31323924 . + . Parent=GSCOCT00028227001 | |
| 17070 chr1 manual_curation exon 31324249 31324848 . + . Parent=GSCOCT00028227001 | |
| 17071 chr1 manual_curation CDS 31319488 31319773 . + 0 Parent=GSCOCT00028227001 | |
| 17072 chr1 manual_curation CDS 31320311 31320429 . + 1 Parent=GSCOCT00028227001 | |
| 17073 chr1 manual_curation CDS 31320968 31321074 . + 0 Parent=GSCOCT00028227001 | |
| 17074 chr1 manual_curation CDS 31321322 31321892 . + 2 Parent=GSCOCT00028227001 | |
| 17075 chr1 manual_curation CDS 31322459 31323010 . + 0 Parent=GSCOCT00028227001 | |
| 17076 chr1 manual_curation CDS 31323202 31323924 . + 0 Parent=GSCOCT00028227001 | |
| 17077 chr1 manual_curation CDS 31324249 31324431 . + 0 Parent=GSCOCT00028227001 | |
| 17078 chr1 manual_curation gene 31324996 31327018 . - . ID=GSCOCG00028228001;Name=Cc01_g12790 | |
| 17079 chr1 manual_curation mRNA 31324996 31327018 . - . ID=GSCOCT00028228001;Parent=GSCOCG00028228001;Name=Cc01_g12790 | |
| 17080 chr1 manual_curation polypeptide 31325163 31326543 . - . ID=GSCOCP00028228001;Dbxref=GENE3D:G3DSA:1.25.40.90,InterPro:IPR001026,InterPro:IPR008942,InterPro:IPR013809,PFAM:PF01417,PROFILE:PS50942,SMART:SM00273,SUPERFAMILY:SSF48464,SwissProt:O88339,SwissProt:O95208,SwissProt:Q80VP1,TAIR:AT1G08670.1,TAIR:AT3G23350.1,TAIR:AT3G46540.1,TrEMBL:B9T789,TrEMBL:C6TEC1,TrEMBL:F6GV17;Derives_from=GSCOCT00028228001;Name=Cc01_g12790;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative ENTH/VHS family protein,CC_functional_completeness:complete,CC_gene:EPN2,CC_gene:Epn1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028228001~ Putative ENTH/VHS family protein~ EPN2~ complete;original_location=complement(join(1138865..1139004%2C1138611..1138733%2C1138325..1138486%2C1137985..1138227%2C1137624..1137867));owner=coffea | |
| 17081 chr1 manual_curation exon 31324996 31325406 . - . Parent=GSCOCT00028228001 | |
| 17082 chr1 manual_curation exon 31325524 31325766 . - . Parent=GSCOCT00028228001 | |
| 17083 chr1 manual_curation exon 31325864 31326025 . - . Parent=GSCOCT00028228001 | |
| 17084 chr1 manual_curation exon 31326150 31326272 . - . Parent=GSCOCT00028228001 | |
| 17085 chr1 manual_curation exon 31326404 31327018 . - . Parent=GSCOCT00028228001 | |
| 17086 chr1 manual_curation CDS 31325163 31325406 . - 2 Parent=GSCOCT00028228001 | |
| 17087 chr1 manual_curation CDS 31325524 31325766 . - 2 Parent=GSCOCT00028228001 | |
| 17088 chr1 manual_curation CDS 31325864 31326025 . - 2 Parent=GSCOCT00028228001 | |
| 17089 chr1 manual_curation CDS 31326150 31326272 . - 2 Parent=GSCOCT00028228001 | |
| 17090 chr1 manual_curation CDS 31326404 31326543 . - 0 Parent=GSCOCT00028228001 | |
| 17091 chr1 manual_curation gene 31331257 31334524 . - . ID=GSCOCG00028229001;Name=Cc01_g12800 | |
| 17092 chr1 manual_curation mRNA 31331257 31334524 . - . ID=GSCOCT00028229001;Parent=GSCOCG00028229001;Name=Cc01_g12800 | |
| 17093 chr1 manual_curation polypeptide 31331319 31334524 . - . ID=GSCOCP00028229001;Dbxref=GENE3D:G3DSA:3.60.40.10,InterPro:IPR001932,InterPro:IPR014045,InterPro:IPR015655,PANTHER:PTHR13832,PFAM:PF00481,SMART:SM00332,SUPERFAMILY:SSF81606,SwissProt:Q84T94,SwissProt:Q9LQN6,SwissProt:Q9ZV25,TAIR:AT1G07630.1,TAIR:AT2G28890.1,TAIR:AT5G02400.1,TrEMBL:B9HPH6,TrEMBL:F6GV16,TrEMBL:G8Z276;Derives_from=GSCOCT00028229001;Name=Cc01_g12800;Ontology_term=CC_evidence_code:ISS,GO:0003824,CC_EC_number:3.1.3.16,PRODUCT:Probable protein phosphatase 2C 4,CC_functional_completeness:complete,CC_gene:PLL5,CC_gene:PLL4,CC_gene:XB15;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028229001~ Probable protein phosphatase 2C 4~ PLL5~ complete;original_location=complement(join(1145306..1146985%2C1145066..1145179%2C1143987..1144251%2C1143780..1143895));owner=coffea | |
| 17094 chr1 manual_curation exon 31331257 31331434 . - . Parent=GSCOCT00028229001 | |
| 17095 chr1 manual_curation exon 31331526 31331790 . - . Parent=GSCOCT00028229001 | |
| 17096 chr1 manual_curation exon 31332605 31332718 . - . Parent=GSCOCT00028229001 | |
| 17097 chr1 manual_curation exon 31332845 31334524 . - . Parent=GSCOCT00028229001 | |
| 17098 chr1 manual_curation CDS 31331319 31331434 . - 1 Parent=GSCOCT00028229001 | |
| 17099 chr1 manual_curation CDS 31331526 31331790 . - 0 Parent=GSCOCT00028229001 | |
| 17100 chr1 manual_curation CDS 31332605 31332718 . - 0 Parent=GSCOCT00028229001 | |
| 17101 chr1 manual_curation CDS 31332845 31334524 . - 0 Parent=GSCOCT00028229001 | |
| 17102 chr1 manual_curation gene 31358186 31359339 . + . ID=GSCOCG00028231001;Name=Cc01_g12810 | |
| 17103 chr1 manual_curation mRNA 31358186 31359339 . + . ID=GSCOCT00028231001;Parent=GSCOCG00028231001;Name=Cc01_g12810 | |
| 17104 chr1 manual_curation polypeptide 31358186 31358371 . + . ID=GSCOCP00028231001;Derives_from=GSCOCT00028231001;Name=Cc01_g12810;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028231001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1170647..1170832;owner=coffea | |
| 17105 chr1 manual_curation exon 31358186 31359339 . + . Parent=GSCOCT00028231001 | |
| 17106 chr1 manual_curation CDS 31358186 31358371 . + 0 Parent=GSCOCT00028231001 | |
| 17107 chr1 manual_curation gene 31359401 31360699 . - . ID=GSCOCG00028232001;Name=Cc01_g12820 | |
| 17108 chr1 manual_curation mRNA 31359401 31360699 . - . ID=GSCOCT00028232001;Parent=GSCOCG00028232001;Name=Cc01_g12820 | |
| 17109 chr1 manual_curation polypeptide 31359401 31360699 . - . ID=GSCOCP00028232001;Dbxref=InterPro:IPR000782,PFAM:PF02469,PROFILE:PS50213,SMART:SM00554,SUPERFAMILY:SSF82153,SwissProt:O22126,SwissProt:Q9FM65,SwissProt:Q9SNC3,TAIR:AT2G45470.1,TAIR:AT3G46550.1,TAIR:AT5G55730.1,TrEMBL:A5BM05,TrEMBL:A9XTL4,TrEMBL:F6GV15;Derives_from=GSCOCT00028232001;Name=Cc01_g12820;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Fasciclin-like arabinogalactan protein 4,CC_functional_completeness:complete,CC_gene:FLA4,CC_gene:FLA1,CC_gene:FLA8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028232001~ Fasciclin-like arabinogalactan protein 4~ FLA4~ complete;original_location=complement(1171862..1173160);owner=coffea | |
| 17110 chr1 manual_curation exon 31359401 31360699 . - . Parent=GSCOCT00028232001 | |
| 17111 chr1 manual_curation CDS 31359401 31360699 . - 0 Parent=GSCOCT00028232001 | |
| 17112 chr1 manual_curation gene 31367396 31368774 . + . ID=GSCOCG00028234001;Name=Cc01_g12830 | |
| 17113 chr1 manual_curation mRNA 31367396 31368774 . + . ID=GSCOCT00028234001;Parent=GSCOCG00028234001;Name=Cc01_g12830 | |
| 17114 chr1 manual_curation polypeptide 31367396 31368774 . + . ID=GSCOCP00028234001;Dbxref=InterPro:IPR006075,InterPro:IPR017959,InterPro:IPR018027,PANTHER:PTHR11659,PFAM:PF02637,PFAM:PF02934,SMART:SM00845,SwissProt:A2ZF53,SwissProt:B9SQR9,SwissProt:Q2R2Z0,TAIR:AT1G48520.1,TrEMBL:F6H8T8,TrEMBL:I1KQC8,TrEMBL:I1KQC9;Derives_from=GSCOCT00028234001;Name=Cc01_g12830;Ontology_term=CC_evidence_code:ISS,GO:0006412,GO:0016874,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:GATB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028234001~ Hypothetical protein~ GATB~ missing_functional_completeness;original_location=join(1179857..1179946%2C1180034..1180174%2C1180265..1180468%2C1180819..1181235);owner=coffea | |
| 17115 chr1 manual_curation exon 31367396 31367485 . + . Parent=GSCOCT00028234001 | |
| 17116 chr1 manual_curation exon 31367573 31367713 . + . Parent=GSCOCT00028234001 | |
| 17117 chr1 manual_curation exon 31367804 31368007 . + . Parent=GSCOCT00028234001 | |
| 17118 chr1 manual_curation exon 31368358 31368774 . + . Parent=GSCOCT00028234001 | |
| 17119 chr1 manual_curation CDS 31367396 31367485 . + 0 Parent=GSCOCT00028234001 | |
| 17120 chr1 manual_curation CDS 31367573 31367713 . + 0 Parent=GSCOCT00028234001 | |
| 17121 chr1 manual_curation CDS 31367804 31368007 . + 0 Parent=GSCOCT00028234001 | |
| 17122 chr1 manual_curation CDS 31368358 31368774 . + 0 Parent=GSCOCT00028234001 | |
| 17123 chr1 manual_curation gene 31374732 31379087 . + . ID=GSCOCG00028235001;Name=Cc01_g12840 | |
| 17124 chr1 manual_curation mRNA 31374732 31379087 . + . ID=GSCOCT00028235001;Parent=GSCOCG00028235001;Name=Cc01_g12840 | |
| 17125 chr1 manual_curation polypeptide 31375635 31378883 . + . ID=GSCOCP00028235001;Dbxref=TAIR:AT1G07620.1,TAIR:AT5G02390.1,TrEMBL:B9GJN7,TrEMBL:B9HPH5,TrEMBL:B9T0W8;Derives_from=GSCOCT00028235001;Name=Cc01_g12840;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Predicted protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028235001~ Putative Predicted protein~ unknown_gene~ complete;original_location=join(1188096..1188261%2C1188756..1188841%2C1188927..1189062%2C1189138..1189614%2C1189675..1190538%2C1190704..1191344);owner=coffea | |
| 17126 chr1 manual_curation exon 31374732 31374945 . + . Parent=GSCOCT00028235001 | |
| 17127 chr1 manual_curation exon 31375572 31375800 . + . Parent=GSCOCT00028235001 | |
| 17128 chr1 manual_curation exon 31376295 31376380 . + . Parent=GSCOCT00028235001 | |
| 17129 chr1 manual_curation exon 31376466 31376601 . + . Parent=GSCOCT00028235001 | |
| 17130 chr1 manual_curation exon 31376677 31377153 . + . Parent=GSCOCT00028235001 | |
| 17131 chr1 manual_curation exon 31377214 31378077 . + . Parent=GSCOCT00028235001 | |
| 17132 chr1 manual_curation exon 31378243 31379087 . + . Parent=GSCOCT00028235001 | |
| 17133 chr1 manual_curation CDS 31375635 31375800 . + 0 Parent=GSCOCT00028235001 | |
| 17134 chr1 manual_curation CDS 31376295 31376380 . + 1 Parent=GSCOCT00028235001 | |
| 17135 chr1 manual_curation CDS 31376466 31376601 . + 0 Parent=GSCOCT00028235001 | |
| 17136 chr1 manual_curation CDS 31376677 31377153 . + 1 Parent=GSCOCT00028235001 | |
| 17137 chr1 manual_curation CDS 31377214 31378077 . + 1 Parent=GSCOCT00028235001 | |
| 17138 chr1 manual_curation CDS 31378243 31378883 . + 1 Parent=GSCOCT00028235001 | |
| 17139 chr1 manual_curation gene 31381491 31382242 . + . ID=GSCOCG00028236001;Name=Cc01_g12850 | |
| 17140 chr1 manual_curation mRNA 31381491 31382242 . + . ID=GSCOCT00028236001;Parent=GSCOCG00028236001;Name=Cc01_g12850 | |
| 17141 chr1 manual_curation polypeptide 31381491 31382071 . + . ID=GSCOCP00028236001;Dbxref=InterPro:IPR000347,PFAM:PF01439,SwissProt:P20238,SwissProt:Q40410,SwissProt:Q43515,TrEMBL:G9J2D8,TrEMBL:O22492,TrEMBL:O82581;Derives_from=GSCOCT00028236001;Name=Cc01_g12850;Ontology_term=CC_evidence_code:ISS,GO:0046872,CC_EC_number:missing_EC_number,PRODUCT:Metallothionein 1 (Fragment),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028236001~ Metallothionein 1 (Fragment)~ unknown_gene~ complete;original_location=join(1193952..1194004%2C1194267..1194338%2C1194439..1194532);owner=coffea | |
| 17142 chr1 manual_curation exon 31381491 31381543 . + . Parent=GSCOCT00028236001 | |
| 17143 chr1 manual_curation exon 31381806 31381877 . + . Parent=GSCOCT00028236001 | |
| 17144 chr1 manual_curation exon 31381978 31382242 . + . Parent=GSCOCT00028236001 | |
| 17145 chr1 manual_curation CDS 31381491 31381543 . + 0 Parent=GSCOCT00028236001 | |
| 17146 chr1 manual_curation CDS 31381806 31381877 . + 2 Parent=GSCOCT00028236001 | |
| 17147 chr1 manual_curation CDS 31381978 31382071 . + 2 Parent=GSCOCT00028236001 | |
| 17148 chr1 manual_curation gene 31383043 31385085 . + . ID=GSCOCG00028237001;Name=Cc01_g12860 | |
| 17149 chr1 manual_curation mRNA 31383043 31385085 . + . ID=GSCOCT00028237001;Parent=GSCOCG00028237001;Name=Cc01_g12860 | |
| 17150 chr1 manual_curation polypeptide 31383043 31384901 . + . ID=GSCOCP00028237001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q940Q2,SwissProt:Q9C977,SwissProt:Q9XI21,TAIR:AT1G07590.1,TAIR:AT1G15480.1,TAIR:AT1G80270.1,TIGRFAMs:TIGR00756,TrEMBL:B9HPH3,TrEMBL:B9T3N7,TrEMBL:F6GV12;Derives_from=GSCOCT00028237001;Name=Cc01_g12860;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At1g07590%2C mitochondrial,CC_functional_completeness:complete,CC_gene:At1g07590,CC_gene:At1g80270,CC_gene:At1g15480;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028237001~ Pentatricopeptide repeat-containing protein At1g07590%2C mitochondrial~ At1g07590~ complete;original_location=join(1195504..1195863%2C1196112..1197362);owner=coffea | |
| 17151 chr1 manual_curation exon 31383043 31383402 . + . Parent=GSCOCT00028237001 | |
| 17152 chr1 manual_curation exon 31383651 31385085 . + . Parent=GSCOCT00028237001 | |
| 17153 chr1 manual_curation CDS 31383043 31383402 . + 0 Parent=GSCOCT00028237001 | |
| 17154 chr1 manual_curation CDS 31383651 31384901 . + 0 Parent=GSCOCT00028237001 | |
| 17155 chr1 manual_curation gene 31385149 31388319 . - . ID=GSCOCG00028238001;Name=Cc01_g12870 | |
| 17156 chr1 manual_curation mRNA 31385149 31388319 . - . ID=GSCOCT00028238001;Parent=GSCOCG00028238001;Name=Cc01_g12870 | |
| 17157 chr1 manual_curation polypeptide 31386074 31387982 . - . ID=GSCOCP00028238001;Dbxref=InterPro:IPR003397,PFAM:PF02466,SwissProt:Q0WMZ5,SwissProt:Q41050,SwissProt:Q9ZV24,TAIR:AT2G28900.1,TAIR:AT4G16160.2,TrEMBL:B9T3N6,TrEMBL:Q5CZ54,TrEMBL:Q65XV6;Derives_from=GSCOCT00028238001;Name=Cc01_g12870;Ontology_term=CC_evidence_code:ISS,GO:0005743,GO:0008565,GO:0015031,CC_EC_number:missing_EC_number,PRODUCT:Outer envelope pore protein 16%2C chloroplastic,CC_functional_completeness:complete,CC_gene:OEP16,CC_gene:OEP161,CC_gene:OEP162;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028238001~ Outer envelope pore protein 16%2C chloroplastic~ OEP16~ complete;original_location=complement(join(1200330..1200443%2C1200151..1200202%2C1199769..1199800%2C1199363..1199396%2C1199167..1199234%2C1198535..1198675));owner=coffea | |
| 17158 chr1 manual_curation exon 31385149 31386214 . - . Parent=GSCOCT00028238001 | |
| 17159 chr1 manual_curation exon 31386706 31386773 . - . Parent=GSCOCT00028238001 | |
| 17160 chr1 manual_curation exon 31386902 31386935 . - . Parent=GSCOCT00028238001 | |
| 17161 chr1 manual_curation exon 31387308 31387339 . - . Parent=GSCOCT00028238001 | |
| 17162 chr1 manual_curation exon 31387690 31387741 . - . Parent=GSCOCT00028238001 | |
| 17163 chr1 manual_curation exon 31387869 31388319 . - . Parent=GSCOCT00028238001 | |
| 17164 chr1 manual_curation CDS 31386074 31386214 . - 0 Parent=GSCOCT00028238001 | |
| 17165 chr1 manual_curation CDS 31386706 31386773 . - 1 Parent=GSCOCT00028238001 | |
| 17166 chr1 manual_curation CDS 31386902 31386935 . - 0 Parent=GSCOCT00028238001 | |
| 17167 chr1 manual_curation CDS 31387308 31387339 . - 1 Parent=GSCOCT00028238001 | |
| 17168 chr1 manual_curation CDS 31387690 31387741 . - 0 Parent=GSCOCT00028238001 | |
| 17169 chr1 manual_curation CDS 31387869 31387982 . - 0 Parent=GSCOCT00028238001 | |
| 17170 chr1 manual_curation gene 31394671 31397911 . + . ID=GSCOCG00028239001;Name=Cc01_g12880 | |
| 17171 chr1 manual_curation mRNA 31394671 31397911 . + . ID=GSCOCT00028239001;Parent=GSCOCG00028239001;Name=Cc01_g12880 | |
| 17172 chr1 manual_curation polypeptide 31394817 31397651 . + . ID=GSCOCP00028239001;Dbxref=GENE3D:G3DSA:3.20.20.100,InterPro:IPR001395,PANTHER:PTHR11732,PFAM:PF00248,SUPERFAMILY:SSF51430,SwissProt:A2XRZ0,SwissProt:O22707,SwissProt:Q84M96,TAIR:AT1G60680.1,TAIR:AT1G60690.1,TAIR:AT1G60710.1,TrEMBL:A5AGJ5,TrEMBL:D7U9L7,TrEMBL:D7U9L9;Derives_from=GSCOCT00028239001;Name=Cc01_g12880;Ontology_term=CC_evidence_code:ISS,GO:0016491,GO:0055114,CC_EC_number:1.1.1.65,PRODUCT:Probable aldo-keto reductase 3,CC_functional_completeness:complete,CC_gene:At1g60690,CC_gene:OsI_15387,CC_gene:AGD2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028239001~ Probable aldo-keto reductase 3~ At1g60690~ complete;original_location=join(1207278..1207376%2C1208072..1208278%2C1208611..1208783%2C1208860..1208971%2C1209774..1210112);owner=coffea | |
| 17173 chr1 manual_curation exon 31394671 31394915 . + . Parent=GSCOCT00028239001 | |
| 17174 chr1 manual_curation exon 31395611 31395817 . + . Parent=GSCOCT00028239001 | |
| 17175 chr1 manual_curation exon 31396150 31396322 . + . Parent=GSCOCT00028239001 | |
| 17176 chr1 manual_curation exon 31396399 31396510 . + . Parent=GSCOCT00028239001 | |
| 17177 chr1 manual_curation exon 31397313 31397911 . + . Parent=GSCOCT00028239001 | |
| 17178 chr1 manual_curation CDS 31394817 31394915 . + 0 Parent=GSCOCT00028239001 | |
| 17179 chr1 manual_curation CDS 31395611 31395817 . + 0 Parent=GSCOCT00028239001 | |
| 17180 chr1 manual_curation CDS 31396150 31396322 . + 0 Parent=GSCOCT00028239001 | |
| 17181 chr1 manual_curation CDS 31396399 31396510 . + 2 Parent=GSCOCT00028239001 | |
| 17182 chr1 manual_curation CDS 31397313 31397651 . + 0 Parent=GSCOCT00028239001 | |
| 17183 chr1 manual_curation gene 31399824 31401527 . - . ID=GSCOCG00028240001;Name=Cc01_g12890 | |
| 17184 chr1 manual_curation mRNA 31399824 31401527 . - . ID=GSCOCT00028240001;Parent=GSCOCG00028240001;Name=Cc01_g12890 | |
| 17185 chr1 manual_curation polypeptide 31400154 31401167 . - . ID=GSCOCP00028240001;Dbxref=InterPro:IPR001878,PROFILE:PS50158,SwissProt:Q84Y18,TAIR:AT2G28910.1,TrEMBL:B9MTX0,TrEMBL:B9T3N1,TrEMBL:F6GV10;Derives_from=GSCOCT00028240001;Name=Cc01_g12890;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Predicted protein,CC_functional_completeness:complete,CC_gene:CXIP4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028240001~ Predicted protein~ CXIP4~ complete;original_location=complement(1212615..1213628);owner=coffea | |
| 17186 chr1 manual_curation exon 31401361 31401527 . - . Parent=GSCOCT00028240001 | |
| 17187 chr1 manual_curation exon 31399824 31401203 . - . Parent=GSCOCT00028240001 | |
| 17188 chr1 manual_curation CDS 31400154 31401167 . - 0 Parent=GSCOCT00028240001 | |
| 17189 chr1 manual_curation gene 31405989 31408694 . + . ID=GSCOCG00028242001;Name=Cc01_g12900 | |
| 17190 chr1 manual_curation mRNA 31405989 31408694 . + . ID=GSCOCT00028242001;Parent=GSCOCG00028242001;Name=Cc01_g12900 | |
| 17191 chr1 manual_curation polypeptide 31405989 31407677 . + . ID=GSCOCP00028242001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q9LSL9,SwissProt:Q9SXD1,SwissProt:Q9T0D6,TAIR:AT1G62670.1,TAIR:AT4G11690.1,TAIR:AT5G65560.1,TIGRFAMs:TIGR00756,TrEMBL:A5C2B0,TrEMBL:B9GUR4,TrEMBL:D7SKF2;Derives_from=GSCOCT00028242001;Name=Cc01_g12900;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At4g11690,CC_functional_completeness:complete,CC_gene:At4g11690,CC_gene:At5g65560,CC_gene:At1g62670;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028242001~ Pentatricopeptide repeat-containing protein At4g11690~ At4g11690~ complete;original_location=1218450..1220138;owner=coffea | |
| 17192 chr1 manual_curation exon 31405989 31408694 . + . Parent=GSCOCT00028242001 | |
| 17193 chr1 manual_curation CDS 31405989 31407677 . + 0 Parent=GSCOCT00028242001 | |
| 17194 chr1 manual_curation gene 31408946 31412816 . + . ID=GSCOCG00028243001;Name=Cc01_g12910 | |
| 17195 chr1 manual_curation mRNA 31408946 31412816 . + . ID=GSCOCT00028243001;Parent=GSCOCG00028243001;Name=Cc01_g12910 | |
| 17196 chr1 manual_curation polypeptide 31409004 31412644 . + . ID=GSCOCP00028243001;Dbxref=GENE3D:G3DSA:3.20.20.70,InterPro:IPR000652,InterPro:IPR013785,InterPro:IPR020861,PANTHER:PTHR21139,PFAM:PF00121,PROFILE:PS51440,PROSITE:PS00171,SUPERFAMILY:SSF51351,SwissProt:P48491,SwissProt:P48494,SwissProt:P48495,TAIR:AT2G21170.1,TAIR:AT3G55440.1,TIGRFAMs:TIGR00419,TrEMBL:B9GJN0,TrEMBL:D7SKE9,TrEMBL:Q3HRV9;Derives_from=GSCOCT00028243001;Name=Cc01_g12910;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004807,GO:0008152,CC_EC_number:5.3.1.1,PRODUCT:Triosephosphate isomerase%2C cytosolic,CC_functional_completeness:complete,CC_gene:CTIMC,CC_gene:TPIP1,CC_gene:TPI;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028243001~ Triosephosphate isomerase%2C cytosolic~ CTIMC~ complete;original_location=join(1221465..1221503%2C1221588..1221663%2C1222075..1222198%2C1222800..1222884%2C1222978..1223110%2C1223540..1223634%2C1224410..1224506%2C1224856..1224938%2C1225052..1225105);owner=coffea | |
| 17197 chr1 manual_curation exon 31408946 31409042 . + . Parent=GSCOCT00028243001 | |
| 17198 chr1 manual_curation exon 31409127 31409202 . + . Parent=GSCOCT00028243001 | |
| 17199 chr1 manual_curation exon 31409614 31409737 . + . Parent=GSCOCT00028243001 | |
| 17200 chr1 manual_curation exon 31410339 31410423 . + . Parent=GSCOCT00028243001 | |
| 17201 chr1 manual_curation exon 31410517 31410649 . + . Parent=GSCOCT00028243001 | |
| 17202 chr1 manual_curation exon 31411079 31411173 . + . Parent=GSCOCT00028243001 | |
| 17203 chr1 manual_curation exon 31411949 31412045 . + . Parent=GSCOCT00028243001 | |
| 17204 chr1 manual_curation exon 31412395 31412477 . + . Parent=GSCOCT00028243001 | |
| 17205 chr1 manual_curation exon 31412591 31412816 . + . Parent=GSCOCT00028243001 | |
| 17206 chr1 manual_curation CDS 31409004 31409042 . + 0 Parent=GSCOCT00028243001 | |
| 17207 chr1 manual_curation CDS 31409127 31409202 . + 0 Parent=GSCOCT00028243001 | |
| 17208 chr1 manual_curation CDS 31409614 31409737 . + 1 Parent=GSCOCT00028243001 | |
| 17209 chr1 manual_curation CDS 31410339 31410423 . + 2 Parent=GSCOCT00028243001 | |
| 17210 chr1 manual_curation CDS 31410517 31410649 . + 0 Parent=GSCOCT00028243001 | |
| 17211 chr1 manual_curation CDS 31411079 31411173 . + 1 Parent=GSCOCT00028243001 | |
| 17212 chr1 manual_curation CDS 31411949 31412045 . + 0 Parent=GSCOCT00028243001 | |
| 17213 chr1 manual_curation CDS 31412395 31412477 . + 1 Parent=GSCOCT00028243001 | |
| 17214 chr1 manual_curation CDS 31412591 31412644 . + 0 Parent=GSCOCT00028243001 | |
| 17215 chr1 manual_curation gene 31422860 31426495 . + . ID=GSCOCG00028245001;Name=Cc01_g12920 | |
| 17216 chr1 manual_curation mRNA 31422860 31426495 . + . ID=GSCOCT00028245001;Parent=GSCOCG00028245001;Name=Cc01_g12920 | |
| 17217 chr1 manual_curation polypeptide 31423201 31426049 . + . ID=GSCOCP00028245001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:P43293,SwissProt:P46573,SwissProt:Q06548,TAIR:AT1G07570.3,TAIR:AT2G28930.1,TAIR:AT5G02290.1,TrEMBL:B5L8D2,TrEMBL:B9GJM9,TrEMBL:F6GV08;Derives_from=GSCOCT00028245001;Name=Cc01_g12920;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.10.2,PRODUCT:Protein kinase APK1A%2C chloroplastic,CC_functional_completeness:complete,CC_gene:APK1A,CC_gene:APK1B,CC_gene:NAK;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028245001~ Protein kinase APK1A%2C chloroplastic~ APK1A~ complete;original_location=join(1235662..1235713%2C1236302..1236627%2C1236805..1236940%2C1237056..1237198%2C1237313..1237436%2C1238071..1238510);owner=coffea | |
| 17218 chr1 manual_curation exon 31422860 31422955 . + . Parent=GSCOCT00028245001 | |
| 17219 chr1 manual_curation exon 31423087 31423252 . + . Parent=GSCOCT00028245001 | |
| 17220 chr1 manual_curation exon 31423841 31424166 . + . Parent=GSCOCT00028245001 | |
| 17221 chr1 manual_curation exon 31424344 31424479 . + . Parent=GSCOCT00028245001 | |
| 17222 chr1 manual_curation exon 31424595 31424737 . + . Parent=GSCOCT00028245001 | |
| 17223 chr1 manual_curation exon 31424852 31424975 . + . Parent=GSCOCT00028245001 | |
| 17224 chr1 manual_curation exon 31425610 31426495 . + . Parent=GSCOCT00028245001 | |
| 17225 chr1 manual_curation CDS 31423201 31423252 . + 0 Parent=GSCOCT00028245001 | |
| 17226 chr1 manual_curation CDS 31423841 31424166 . + 1 Parent=GSCOCT00028245001 | |
| 17227 chr1 manual_curation CDS 31424344 31424479 . + 0 Parent=GSCOCT00028245001 | |
| 17228 chr1 manual_curation CDS 31424595 31424737 . + 1 Parent=GSCOCT00028245001 | |
| 17229 chr1 manual_curation CDS 31424852 31424975 . + 0 Parent=GSCOCT00028245001 | |
| 17230 chr1 manual_curation CDS 31425610 31426049 . + 1 Parent=GSCOCT00028245001 | |
| 17231 chr1 manual_curation gene 31427382 31431013 . - . ID=GSCOCG00028246001;Name=Cc01_g12930 | |
| 17232 chr1 manual_curation mRNA 31427382 31431013 . - . ID=GSCOCT00028246001;Parent=GSCOCG00028246001;Name=Cc01_g12930 | |
| 17233 chr1 manual_curation polypeptide 31427636 31431013 . - . ID=GSCOCP00028246001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR020635,PFAM:PF07714,PROFILE:PS50011,PROSITE:PS00107,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q9LFP7,SwissProt:Q9LTC0,SwissProt:Q9SRH7,TAIR:AT2G28940.2,TAIR:AT3G09830.1,TAIR:AT5G03320.1,TrEMBL:B9SZM0,TrEMBL:F6GV07,TrEMBL:O81064;Derives_from=GSCOCT00028246001;Name=Cc01_g12930;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Probable receptor-like protein kinase At5g47070,CC_functional_completeness:modules,CC_gene:At5g47070,CC_gene:At3g01300,CC_gene:At5g15080;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028246001~ Probable receptor-like protein kinase At5g47070~ At5g47070~ modules;original_location=complement(join(1243053..1243474%2C1241960..1242227%2C1240945..1241067%2C1240097..1240708));owner=coffea | |
| 17234 chr1 manual_curation exon 31427382 31428247 . - . Parent=GSCOCT00028246001 | |
| 17235 chr1 manual_curation exon 31428484 31428606 . - . Parent=GSCOCT00028246001 | |
| 17236 chr1 manual_curation exon 31429499 31429766 . - . Parent=GSCOCT00028246001 | |
| 17237 chr1 manual_curation exon 31430592 31431013 . - . Parent=GSCOCT00028246001 | |
| 17238 chr1 manual_curation CDS 31427636 31428247 . - 0 Parent=GSCOCT00028246001 | |
| 17239 chr1 manual_curation CDS 31428484 31428606 . - 0 Parent=GSCOCT00028246001 | |
| 17240 chr1 manual_curation CDS 31429499 31429766 . - 2 Parent=GSCOCT00028246001 | |
| 17241 chr1 manual_curation CDS 31430592 31431013 . - 0 Parent=GSCOCT00028246001 | |
| 17242 chr1 manual_curation gene 31443726 31444145 . - . ID=GSCOCG00028249001;Name=Cc01_g12940 | |
| 17243 chr1 manual_curation mRNA 31443726 31444145 . - . ID=GSCOCT00028249001;Parent=GSCOCG00028249001;Name=Cc01_g12940 | |
| 17244 chr1 manual_curation polypeptide 31443726 31444145 . - . ID=GSCOCP00028249001;Dbxref=SwissProt:O23624,SwissProt:O24340,SwissProt:Q5Q0B3,TAIR:AT4G31380.1,TAIR:AT5G10625.1,TAIR:AT5G24860.1,TrEMBL:A5BZJ2,TrEMBL:B9HPG8,TrEMBL:I1M4X1;Derives_from=GSCOCT00028249001;Name=Cc01_g12940;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Flowering-promoting factor 1,CC_functional_completeness:complete,CC_gene:FPF1,CC_gene:FLP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028249001~ Flowering-promoting factor 1~ FPF1~ complete;original_location=complement(1256187..1256606);owner=coffea | |
| 17245 chr1 manual_curation exon 31443726 31444145 . - . Parent=GSCOCT00028249001 | |
| 17246 chr1 manual_curation CDS 31443726 31444145 . - 0 Parent=GSCOCT00028249001 | |
| 17247 chr1 manual_curation gene 31450298 31455431 . + . ID=GSCOCG00028252001;Name=Cc01_g12950 | |
| 17248 chr1 manual_curation mRNA 31450298 31455431 . + . ID=GSCOCT00028252001;Parent=GSCOCG00028252001;Name=Cc01_g12950 | |
| 17249 chr1 manual_curation polypeptide 31451711 31454535 . + . ID=GSCOCP00028252001;Dbxref=InterPro:IPR005379,InterPro:IPR005380,InterPro:IPR005381,PFAM:PF03468,PFAM:PF03469,PFAM:PF03470,TAIR:AT1G13790.1,TAIR:AT1G15910.1,TAIR:AT3G48670.1,TrEMBL:B9T4I5,TrEMBL:D7TLS7,TrEMBL:I1LMF4;Derives_from=GSCOCT00028252001;Name=Cc01_g12950;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative XH/XS domain-containing protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028252001~ Putative XH/XS domain-containing protein~ unknown_gene~ complete;original_location=join(1264172..1265075%2C1265160..1265335%2C1265650..1265718%2C1265817..1266104%2C1266314..1266529%2C1266760..1266996);owner=coffea | |
| 17250 chr1 manual_curation exon 31450298 31450493 . + . Parent=GSCOCT00028252001 | |
| 17251 chr1 manual_curation exon 31454784 31455431 . + . Parent=GSCOCT00028252001 | |
| 17252 chr1 manual_curation exon 31451699 31452614 . + . Parent=GSCOCT00028252001 | |
| 17253 chr1 manual_curation exon 31452699 31452874 . + . Parent=GSCOCT00028252001 | |
| 17254 chr1 manual_curation exon 31453189 31453257 . + . Parent=GSCOCT00028252001 | |
| 17255 chr1 manual_curation exon 31453356 31453643 . + . Parent=GSCOCT00028252001 | |
| 17256 chr1 manual_curation exon 31453853 31454068 . + . Parent=GSCOCT00028252001 | |
| 17257 chr1 manual_curation exon 31454299 31454537 . + . Parent=GSCOCT00028252001 | |
| 17258 chr1 manual_curation CDS 31451711 31452614 . + 0 Parent=GSCOCT00028252001 | |
| 17259 chr1 manual_curation CDS 31452699 31452874 . + 1 Parent=GSCOCT00028252001 | |
| 17260 chr1 manual_curation CDS 31453189 31453257 . + 0 Parent=GSCOCT00028252001 | |
| 17261 chr1 manual_curation CDS 31453356 31453643 . + 0 Parent=GSCOCT00028252001 | |
| 17262 chr1 manual_curation CDS 31453853 31454068 . + 0 Parent=GSCOCT00028252001 | |
| 17263 chr1 manual_curation CDS 31454299 31454535 . + 0 Parent=GSCOCT00028252001 | |
| 17264 chr1 manual_curation gene 31456552 31459421 . - . ID=GSCOCG00028253001;Name=Cc01_g12960 | |
| 17265 chr1 manual_curation mRNA 31456552 31459421 . - . ID=GSCOCT00028253001;Parent=GSCOCG00028253001;Name=Cc01_g12960 | |
| 17266 chr1 manual_curation polypeptide 31457101 31459262 . - . ID=GSCOCP00028253001;Dbxref=GENE3D:G3DSA:2.40.40.40,GENE3D:G3DSA:2.60.40.760,InterPro:IPR002963,InterPro:IPR005132,InterPro:IPR007112,InterPro:IPR007117,InterPro:IPR007118,InterPro:IPR009009,InterPro:IPR014734,PFAM:PF01357,PFAM:PF03330,PRINTS:PR01225,PRINTS:PR01226,PROFILE:PS50842,PROFILE:PS50843,SUPERFAMILY:SSF49590,SUPERFAMILY:SSF50685,SwissProt:O48818,SwissProt:Q38865,SwissProt:Q852A1,TAIR:AT2G28950.1,TAIR:AT2G39700.1,TAIR:AT3G55500.1,TrEMBL:G4XZW7,TrEMBL:G4XZW8,TrEMBL:G4XZY3;Derives_from=GSCOCT00028253001;Name=Cc01_g12960;Ontology_term=CC_evidence_code:ISS,GO:0005576,GO:0009664,CC_EC_number:missing_EC_number,PRODUCT:Expansin-A4,CC_functional_completeness:complete,CC_gene:EXPA4,CC_gene:EXPA6,CC_gene:EXPA7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028253001~ Expansin-A4~ EXPA4~ complete;original_location=complement(join(1271570..1271723%2C1270860..1271178%2C1269562..1269871));owner=coffea | |
| 17267 chr1 manual_curation exon 31456552 31457410 . - . Parent=GSCOCT00028253001 | |
| 17268 chr1 manual_curation exon 31458399 31458717 . - . Parent=GSCOCT00028253001 | |
| 17269 chr1 manual_curation exon 31459109 31459421 . - . Parent=GSCOCT00028253001 | |
| 17270 chr1 manual_curation CDS 31457101 31457410 . - 2 Parent=GSCOCT00028253001 | |
| 17271 chr1 manual_curation CDS 31458399 31458717 . - 1 Parent=GSCOCT00028253001 | |
| 17272 chr1 manual_curation CDS 31459109 31459262 . - 0 Parent=GSCOCT00028253001 | |
| 17273 chr1 manual_curation gene 31465953 31466907 . + . ID=GSCOCG00028254001;Name=Cc01_g12970 | |
| 17274 chr1 manual_curation mRNA 31465953 31466907 . + . ID=GSCOCT00028254001;Parent=GSCOCG00028254001;Name=Cc01_g12970 | |
| 17275 chr1 manual_curation polypeptide 31466695 31466907 . + . ID=GSCOCP00028254001;Derives_from=GSCOCT00028254001;Name=Cc01_g12970;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028254001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1279156..1279368;owner=coffea | |
| 17276 chr1 manual_curation exon 31465953 31466907 . + . Parent=GSCOCT00028254001 | |
| 17277 chr1 manual_curation CDS 31466695 31466907 . + 0 Parent=GSCOCT00028254001 | |
| 17278 chr1 manual_curation gene 31468990 31474203 . - . ID=GSCOCG00028255001;Name=Cc01_g12980 | |
| 17279 chr1 manual_curation mRNA 31468990 31474203 . - . ID=GSCOCT00028255001;Parent=GSCOCG00028255001;Name=Cc01_g12980 | |
| 17280 chr1 manual_curation polypeptide 31469364 31474148 . - . ID=GSCOCP00028255001;Dbxref=InterPro:IPR013089,InterPro:IPR013989,PANTHER:PTHR23230,PFAM:PF10539,PROFILE:PS51222,SMART:SM00767,SwissProt:P37707,TAIR:AT2G32910.1,TAIR:AT2G35140.1,TAIR:AT5G61910.1,TrEMBL:B8LQS0,TrEMBL:B9I831,TrEMBL:C0PTN2;Derives_from=GSCOCT00028255001;Name=Cc01_g12980;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028255001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1286533..1286609%2C1285082..1286063%2C1283041..1283157%2C1281825..1282583));owner=coffea | |
| 17281 chr1 manual_curation exon 31468990 31470122 . - . Parent=GSCOCT00028255001 | |
| 17282 chr1 manual_curation exon 31470580 31470696 . - . Parent=GSCOCT00028255001 | |
| 17283 chr1 manual_curation exon 31472621 31473602 . - . Parent=GSCOCT00028255001 | |
| 17284 chr1 manual_curation exon 31474072 31474203 . - . Parent=GSCOCT00028255001 | |
| 17285 chr1 manual_curation CDS 31469364 31470122 . - 0 Parent=GSCOCT00028255001 | |
| 17286 chr1 manual_curation CDS 31470580 31470696 . - 0 Parent=GSCOCT00028255001 | |
| 17287 chr1 manual_curation CDS 31472621 31473602 . - 2 Parent=GSCOCT00028255001 | |
| 17288 chr1 manual_curation CDS 31474072 31474148 . - 0 Parent=GSCOCT00028255001 | |
| 17289 chr1 manual_curation gene 31475201 31478341 . - . ID=GSCOCG00028256001;Name=Cc01_g12990 | |
| 17290 chr1 manual_curation mRNA 31475201 31478341 . - . ID=GSCOCT00028256001;Parent=GSCOCG00028256001;Name=Cc01_g12990 | |
| 17291 chr1 manual_curation polypeptide 31475201 31478341 . - . ID=GSCOCP00028256001;Dbxref=InterPro:IPR002610,InterPro:IPR022764,PANTHER:PTHR22936,PFAM:PF01694,SwissProt:A7YWH9,SwissProt:Q6GMF8,SwissProt:Q6PIX5,TAIR:AT1G63120.1,TAIR:AT2G29050.1,TAIR:AT3G53780.2,TrEMBL:A5ATD5,TrEMBL:F6GV04,TrEMBL:Q0WQX7;Derives_from=GSCOCT00028256001;Name=Cc01_g12990;Ontology_term=CC_evidence_code:ISS,GO:0004252,GO:0016021,CC_EC_number:3.4.21.105,PRODUCT:RHOMBOID-like 1,CC_functional_completeness:complete,CC_gene:rhbdf1,CC_gene:Rhbdf1,CC_gene:RHBDF1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028256001~ RHOMBOID-like 1~ rhbdf1~ complete;original_location=complement(join(1290447..1290802%2C1289817..1289980%2C1289391..1289554%2C1289023..1289279%2C1288482..1288602%2C1287662..1287787));owner=coffea | |
| 17292 chr1 manual_curation exon 31475201 31475326 . - . Parent=GSCOCT00028256001 | |
| 17293 chr1 manual_curation exon 31476021 31476141 . - . Parent=GSCOCT00028256001 | |
| 17294 chr1 manual_curation exon 31476562 31476818 . - . Parent=GSCOCT00028256001 | |
| 17295 chr1 manual_curation exon 31476930 31477093 . - . Parent=GSCOCT00028256001 | |
| 17296 chr1 manual_curation exon 31477356 31477519 . - . Parent=GSCOCT00028256001 | |
| 17297 chr1 manual_curation exon 31477986 31478341 . - . Parent=GSCOCT00028256001 | |
| 17298 chr1 manual_curation CDS 31475201 31475326 . - 0 Parent=GSCOCT00028256001 | |
| 17299 chr1 manual_curation CDS 31476021 31476141 . - 2 Parent=GSCOCT00028256001 | |
| 17300 chr1 manual_curation CDS 31476562 31476818 . - 0 Parent=GSCOCT00028256001 | |
| 17301 chr1 manual_curation CDS 31476930 31477093 . - 1 Parent=GSCOCT00028256001 | |
| 17302 chr1 manual_curation CDS 31477356 31477519 . - 2 Parent=GSCOCT00028256001 | |
| 17303 chr1 manual_curation CDS 31477986 31478341 . - 0 Parent=GSCOCT00028256001 | |
| 17304 chr1 manual_curation gene 31479340 31481067 . + . ID=GSCOCG00028257001;Name=Cc01_g13000 | |
| 17305 chr1 manual_curation mRNA 31479340 31481067 . + . ID=GSCOCT00028257001;Parent=GSCOCG00028257001;Name=Cc01_g13000 | |
| 17306 chr1 manual_curation polypeptide 31479340 31481067 . + . ID=GSCOCP00028257001;Dbxref=InterPro:IPR004263,PFAM:PF03016,SwissProt:Q7XJ98,SwissProt:Q8H038,TAIR:AT2G20370.1,TAIR:AT2G29040.1,TAIR:AT4G13990.1,TrEMBL:A5ATD4,TrEMBL:B9HPG1,TrEMBL:I1LYP6;Derives_from=GSCOCT00028257001;Name=Cc01_g13000;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Xyloglucan galactosyltransferase KATAMARI1 homolog,CC_functional_completeness:fragment,CC_gene:Os03g0144800,CC_gene:KAM1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028257001~ Xyloglucan galactosyltransferase KATAMARI1 homolog~ Os03g0144800~ fragment;original_location=join(1291801..1291888%2C1292084..1293528);owner=coffea | |
| 17307 chr1 manual_curation exon 31479340 31479427 . + . Parent=GSCOCT00028257001 | |
| 17308 chr1 manual_curation exon 31479623 31481067 . + . Parent=GSCOCT00028257001 | |
| 17309 chr1 manual_curation CDS 31479340 31479427 . + 0 Parent=GSCOCT00028257001 | |
| 17310 chr1 manual_curation CDS 31479623 31481067 . + 1 Parent=GSCOCT00028257001 | |
| 17311 chr1 manual_curation gene 31482613 31486247 . + . ID=GSCOCG00028258001;Name=Cc01_g13010 | |
| 17312 chr1 manual_curation mRNA 31482613 31486247 . + . ID=GSCOCT00028258001;Parent=GSCOCG00028258001;Name=Cc01_g13010 | |
| 17313 chr1 manual_curation polypeptide 31482697 31485855 . + . ID=GSCOCP00028258001;Dbxref=TAIR:AT5G59400.2,TrEMBL:A5ATD4,TrEMBL:B9GJM4,TrEMBL:D7SKE0;Derives_from=GSCOCT00028258001;Name=Cc01_g13010;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028258001~ FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: PGR5-like B (TAIR:AT4G11960.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(1295158..1295388%2C1295488..1295550%2C1295663..1295749%2C1296281..1296521%2C1297646..1297719%2C1297861..1297959%2C1298230..1298316);owner=coffea | |
| 17314 chr1 manual_curation exon 31482613 31482927 . + . Parent=GSCOCT00028258001 | |
| 17315 chr1 manual_curation exon 31483027 31483089 . + . Parent=GSCOCT00028258001 | |
| 17316 chr1 manual_curation exon 31483202 31483288 . + . Parent=GSCOCT00028258001 | |
| 17317 chr1 manual_curation exon 31483820 31484060 . + . Parent=GSCOCT00028258001 | |
| 17318 chr1 manual_curation exon 31485185 31485258 . + . Parent=GSCOCT00028258001 | |
| 17319 chr1 manual_curation exon 31485400 31485498 . + . Parent=GSCOCT00028258001 | |
| 17320 chr1 manual_curation exon 31485769 31486247 . + . Parent=GSCOCT00028258001 | |
| 17321 chr1 manual_curation CDS 31482697 31482927 . + 0 Parent=GSCOCT00028258001 | |
| 17322 chr1 manual_curation CDS 31483027 31483089 . + 0 Parent=GSCOCT00028258001 | |
| 17323 chr1 manual_curation CDS 31483202 31483288 . + 0 Parent=GSCOCT00028258001 | |
| 17324 chr1 manual_curation CDS 31483820 31484060 . + 0 Parent=GSCOCT00028258001 | |
| 17325 chr1 manual_curation CDS 31485185 31485258 . + 1 Parent=GSCOCT00028258001 | |
| 17326 chr1 manual_curation CDS 31485400 31485498 . + 0 Parent=GSCOCT00028258001 | |
| 17327 chr1 manual_curation CDS 31485769 31485855 . + 0 Parent=GSCOCT00028258001 | |
| 17328 chr1 manual_curation gene 31487594 31491448 . - . ID=GSCOCG00028260001;Name=Cc01_g13020 | |
| 17329 chr1 manual_curation mRNA 31487594 31491448 . - . ID=GSCOCT00028260001;Parent=GSCOCG00028260001;Name=Cc01_g13020 | |
| 17330 chr1 manual_curation polypeptide 31487679 31491069 . - . ID=GSCOCP00028260001;Dbxref=InterPro:IPR010742,PANTHER:PTHR12906,SwissProt:Q9BUV8,SwissProt:Q9CQT9,TAIR:AT2G29020.1,TAIR:AT5G59410.1,TrEMBL:D7MSE6,TrEMBL:D7SKD9,TrEMBL:Q6NKV4;Derives_from=GSCOCT00028260001;Name=Cc01_g13020;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized protein C20orf24 homolog,CC_functional_completeness:complete,CC_gene:C20orf24;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028260001~ Putative Uncharacterized protein C20orf24 homolog~ C20orf24~ complete;original_location=complement(join(1303417..1303530%2C1301468..1301571%2C1300299..1300428%2C1300140..1300178));owner=coffea | |
| 17331 chr1 manual_curation exon 31487594 31487717 . - . Parent=GSCOCT00028260001 | |
| 17332 chr1 manual_curation exon 31487838 31487967 . - . Parent=GSCOCT00028260001 | |
| 17333 chr1 manual_curation exon 31489007 31489110 . - . Parent=GSCOCT00028260001 | |
| 17334 chr1 manual_curation exon 31490956 31491448 . - . Parent=GSCOCT00028260001 | |
| 17335 chr1 manual_curation CDS 31487679 31487717 . - 0 Parent=GSCOCT00028260001 | |
| 17336 chr1 manual_curation CDS 31487838 31487967 . - 2 Parent=GSCOCT00028260001 | |
| 17337 chr1 manual_curation CDS 31489007 31489110 . - 0 Parent=GSCOCT00028260001 | |
| 17338 chr1 manual_curation CDS 31490956 31491069 . - 0 Parent=GSCOCT00028260001 | |
| 17339 chr1 manual_curation gene 31495300 31501270 . + . ID=GSCOCG00028261001;Name=Cc01_g13030 | |
| 17340 chr1 manual_curation mRNA 31495300 31501270 . + . ID=GSCOCT00028261001;Parent=GSCOCG00028261001;Name=Cc01_g13030 | |
| 17341 chr1 manual_curation polypeptide 31495571 31500880 . + . ID=GSCOCP00028261001;Dbxref=InterPro:IPR000648,InterPro:IPR018494,PANTHER:PTHR10972,PFAM:PF01237,PROSITE:PS01013,SwissProt:Q93Y40,SwissProt:Q9LZM1,SwissProt:Q9SR33,TAIR:AT3G09300.1,TAIR:AT5G02100.1,TAIR:AT5G59420.1,TrEMBL:D7MSE7,TrEMBL:D7SKD8,TrEMBL:I1MDE5;Derives_from=GSCOCT00028261001;Name=Cc01_g13030;Ontology_term=CC_evidence_code:ISS,GO:0008202,CC_EC_number:missing_EC_number,PRODUCT:Oxysterol-binding protein-related protein 3C,CC_functional_completeness:complete,CC_gene:ORP3C,CC_gene:ORP3A,CC_gene:ORP3B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028261001~ Oxysterol-binding protein-related protein 3C~ ORP3C~ complete;original_location=join(1308032..1308129%2C1308705..1308798%2C1309531..1309647%2C1309780..1309852%2C1309952..1310070%2C1310203..1310324%2C1310792..1310968%2C1311438..1311582%2C1312262..1312440%2C1313095..1313341);owner=coffea | |
| 17342 chr1 manual_curation exon 31495300 31495668 . + . Parent=GSCOCT00028261001 | |
| 17343 chr1 manual_curation exon 31496244 31496337 . + . Parent=GSCOCT00028261001 | |
| 17344 chr1 manual_curation exon 31497070 31497186 . + . Parent=GSCOCT00028261001 | |
| 17345 chr1 manual_curation exon 31497319 31497391 . + . Parent=GSCOCT00028261001 | |
| 17346 chr1 manual_curation exon 31497491 31497609 . + . Parent=GSCOCT00028261001 | |
| 17347 chr1 manual_curation exon 31497742 31497863 . + . Parent=GSCOCT00028261001 | |
| 17348 chr1 manual_curation exon 31498331 31498507 . + . Parent=GSCOCT00028261001 | |
| 17349 chr1 manual_curation exon 31498977 31499121 . + . Parent=GSCOCT00028261001 | |
| 17350 chr1 manual_curation exon 31499801 31499979 . + . Parent=GSCOCT00028261001 | |
| 17351 chr1 manual_curation exon 31500634 31501270 . + . Parent=GSCOCT00028261001 | |
| 17352 chr1 manual_curation CDS 31495571 31495668 . + 0 Parent=GSCOCT00028261001 | |
| 17353 chr1 manual_curation CDS 31496244 31496337 . + 2 Parent=GSCOCT00028261001 | |
| 17354 chr1 manual_curation CDS 31497070 31497186 . + 0 Parent=GSCOCT00028261001 | |
| 17355 chr1 manual_curation CDS 31497319 31497391 . + 0 Parent=GSCOCT00028261001 | |
| 17356 chr1 manual_curation CDS 31497491 31497609 . + 1 Parent=GSCOCT00028261001 | |
| 17357 chr1 manual_curation CDS 31497742 31497863 . + 0 Parent=GSCOCT00028261001 | |
| 17358 chr1 manual_curation CDS 31498331 31498507 . + 2 Parent=GSCOCT00028261001 | |
| 17359 chr1 manual_curation CDS 31498977 31499121 . + 2 Parent=GSCOCT00028261001 | |
| 17360 chr1 manual_curation CDS 31499801 31499979 . + 0 Parent=GSCOCT00028261001 | |
| 17361 chr1 manual_curation CDS 31500634 31500880 . + 2 Parent=GSCOCT00028261001 | |
| 17362 chr1 manual_curation gene 31513041 31518029 . + . ID=GSCOCG00028263001;Name=Cc01_g13040 | |
| 17363 chr1 manual_curation mRNA 31513041 31518029 . + . ID=GSCOCT00028263001;Parent=GSCOCG00028263001;Name=Cc01_g13040 | |
| 17364 chr1 manual_curation polypeptide 31514082 31517623 . + . ID=GSCOCP00028263001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001005,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR017930,InterPro:IPR019955,PROFILE:PS50053,PROFILE:PS51294,SMART:SM00717,SUPERFAMILY:SSF46689,SwissProt:Q6R0E3,SwissProt:Q9C7B1,SwissProt:Q9SNB9,TAIR:AT1G07540.1,TAIR:AT3G12560.1,TAIR:AT3G46590.2,TrEMBL:B9HPG4,TrEMBL:B9T8J2,TrEMBL:F6GV03;Derives_from=GSCOCT00028263001;Name=Cc01_g13040;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative Telomere repeat-binding protein 5,CC_functional_completeness:complete,CC_gene:TRP5,CC_gene:TRP3,CC_gene:TRP2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028263001~ Putative Telomere repeat-binding protein 5~ TRP5~ complete;original_location=join(1326543..1326623%2C1326721..1327564%2C1327643..1327858%2C1327967..1328029%2C1328128..1328207%2C1328653..1328894%2C1329233..1329562%2C1329725..1329788%2C1329908..1330084);owner=coffea | |
| 17365 chr1 manual_curation exon 31513041 31513217 . + . Parent=GSCOCT00028263001 | |
| 17366 chr1 manual_curation exon 31513948 31514162 . + . Parent=GSCOCT00028263001 | |
| 17367 chr1 manual_curation exon 31514260 31515103 . + . Parent=GSCOCT00028263001 | |
| 17368 chr1 manual_curation exon 31515182 31515397 . + . Parent=GSCOCT00028263001 | |
| 17369 chr1 manual_curation exon 31515506 31515568 . + . Parent=GSCOCT00028263001 | |
| 17370 chr1 manual_curation exon 31515667 31515746 . + . Parent=GSCOCT00028263001 | |
| 17371 chr1 manual_curation exon 31516192 31516433 . + . Parent=GSCOCT00028263001 | |
| 17372 chr1 manual_curation exon 31516772 31517101 . + . Parent=GSCOCT00028263001 | |
| 17373 chr1 manual_curation exon 31517264 31517327 . + . Parent=GSCOCT00028263001 | |
| 17374 chr1 manual_curation exon 31517447 31518029 . + . Parent=GSCOCT00028263001 | |
| 17375 chr1 manual_curation CDS 31514082 31514162 . + 0 Parent=GSCOCT00028263001 | |
| 17376 chr1 manual_curation CDS 31514260 31515103 . + 0 Parent=GSCOCT00028263001 | |
| 17377 chr1 manual_curation CDS 31515182 31515397 . + 1 Parent=GSCOCT00028263001 | |
| 17378 chr1 manual_curation CDS 31515506 31515568 . + 1 Parent=GSCOCT00028263001 | |
| 17379 chr1 manual_curation CDS 31515667 31515746 . + 1 Parent=GSCOCT00028263001 | |
| 17380 chr1 manual_curation CDS 31516192 31516433 . + 0 Parent=GSCOCT00028263001 | |
| 17381 chr1 manual_curation CDS 31516772 31517101 . + 2 Parent=GSCOCT00028263001 | |
| 17382 chr1 manual_curation CDS 31517264 31517327 . + 2 Parent=GSCOCT00028263001 | |
| 17383 chr1 manual_curation CDS 31517447 31517623 . + 0 Parent=GSCOCT00028263001 | |
| 17384 chr1 manual_curation gene 31519107 31521308 . + . ID=GSCOCG00028264001;Name=Cc01_g13050 | |
| 17385 chr1 manual_curation mRNA 31519107 31521308 . + . ID=GSCOCT00028264001;Parent=GSCOCG00028264001;Name=Cc01_g13050 | |
| 17386 chr1 manual_curation polypeptide 31519107 31521308 . + . ID=GSCOCP00028264001;Dbxref=InterPro:IPR001087,PFAM:PF00657,SwissProt:Q3MKY2,SwissProt:Q94F40,SwissProt:Q9FXJ2,TAIR:AT1G28580.1,TAIR:AT1G28590.1,TAIR:AT1G28600.1,TrEMBL:B9N4J7,TrEMBL:B9SQX6,TrEMBL:D7U9W3;Derives_from=GSCOCT00028264001;Name=Cc01_g13050;Ontology_term=CC_evidence_code:ISS,GO:0006629,CC_EC_number:missing_EC_number,PRODUCT:Putative GDSL esterase/lipase At1g28600,CC_functional_completeness:complete,CC_gene:At1g28600,CC_gene:AAE,CC_gene:At1g28580;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028264001~ Putative GDSL esterase/lipase At1g28600~ At1g28600~ complete;original_location=join(1331568..1331847%2C1332553..1332765%2C1332909..1333057%2C1333178..1333451%2C1333561..1333769);owner=coffea | |
| 17387 chr1 manual_curation exon 31519107 31519386 . + . Parent=GSCOCT00028264001 | |
| 17388 chr1 manual_curation exon 31520092 31520304 . + . Parent=GSCOCT00028264001 | |
| 17389 chr1 manual_curation exon 31520448 31520596 . + . Parent=GSCOCT00028264001 | |
| 17390 chr1 manual_curation exon 31520717 31520990 . + . Parent=GSCOCT00028264001 | |
| 17391 chr1 manual_curation exon 31521100 31521308 . + . Parent=GSCOCT00028264001 | |
| 17392 chr1 manual_curation CDS 31519107 31519386 . + 0 Parent=GSCOCT00028264001 | |
| 17393 chr1 manual_curation CDS 31520092 31520304 . + 1 Parent=GSCOCT00028264001 | |
| 17394 chr1 manual_curation CDS 31520448 31520596 . + 1 Parent=GSCOCT00028264001 | |
| 17395 chr1 manual_curation CDS 31520717 31520990 . + 0 Parent=GSCOCT00028264001 | |
| 17396 chr1 manual_curation CDS 31521100 31521308 . + 1 Parent=GSCOCT00028264001 | |
| 17397 chr1 manual_curation gene 31525120 31529228 . + . ID=GSCOCG00028266001;Name=Cc01_g13060 | |
| 17398 chr1 manual_curation mRNA 31525120 31529228 . + . ID=GSCOCT00028266001;Parent=GSCOCG00028266001;Name=Cc01_g13060 | |
| 17399 chr1 manual_curation polypeptide 31526048 31528297 . + . ID=GSCOCP00028266001;Dbxref=InterPro:IPR005202,PFAM:PF03514,PROFILE:PS50985,SwissProt:P0C883,SwissProt:Q3EDH0,SwissProt:Q9XE58,TAIR:AT1G07520.1,TAIR:AT1G07530.1,TAIR:AT2G29060.1,TrEMBL:B9HPF7,TrEMBL:B9HPF8,TrEMBL:B9T683;Derives_from=GSCOCT00028266001;Name=Cc01_g13060;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Scarecrow-like protein 14,CC_functional_completeness:complete,CC_gene:SCL14,CC_gene:SCL33,CC_gene:SCL31;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028266001~ Putative Scarecrow-like protein 14~ SCL14~ complete;original_location=1338509..1340758;owner=coffea | |
| 17400 chr1 manual_curation exon 31525120 31525212 . + . Parent=GSCOCT00028266001 | |
| 17401 chr1 manual_curation exon 31526027 31529228 . + . Parent=GSCOCT00028266001 | |
| 17402 chr1 manual_curation CDS 31526048 31528297 . + 0 Parent=GSCOCT00028266001 | |
| 17403 chr1 manual_curation gene 31536436 31539966 . + . ID=GSCOCG00028267001;Name=Cc01_g13070 | |
| 17404 chr1 manual_curation mRNA 31536436 31539966 . + . ID=GSCOCT00028267001;Parent=GSCOCG00028267001;Name=Cc01_g13070 | |
| 17405 chr1 manual_curation polypeptide 31537191 31539443 . + . ID=GSCOCP00028267001;Dbxref=InterPro:IPR005202,PFAM:PF03514,PROFILE:PS50985,SwissProt:P0C883,SwissProt:Q9LTI5,SwissProt:Q9XE58,TAIR:AT1G07530.1,TAIR:AT2G29060.1,TAIR:AT5G59450.1,TrEMBL:B9T680,TrEMBL:F6GUZ9,TrEMBL:Q00LP5;Derives_from=GSCOCT00028267001;Name=Cc01_g13070;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Scarecrow-like protein 14,CC_functional_completeness:complete,CC_gene:SCL14,CC_gene:SCL33,CC_gene:SCL11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028267001~ Putative Scarecrow-like protein 14~ SCL14~ complete;original_location=1349652..1351904;owner=coffea | |
| 17406 chr1 manual_curation exon 31536436 31539966 . + . Parent=GSCOCT00028267001 | |
| 17407 chr1 manual_curation CDS 31537191 31539443 . + 0 Parent=GSCOCT00028267001 | |
| 17408 chr1 manual_curation gene 31543762 31546890 . - . ID=GSCOCG00028268001;Name=Cc01_g13080 | |
| 17409 chr1 manual_curation mRNA 31543762 31546890 . - . ID=GSCOCT00028268001;Parent=GSCOCG00028268001;Name=Cc01_g13080 | |
| 17410 chr1 manual_curation polypeptide 31543940 31546742 . - . ID=GSCOCP00028268001;Dbxref=TAIR:AT5G59460.1,TrEMBL:B9HPF2,TrEMBL:B9T678,TrEMBL:D7SKD1;Derives_from=GSCOCT00028268001;Name=Cc01_g13080;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative scarecrow-like transcription factor 11 (SCL11),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028268001~ Putative scarecrow-like transcription factor 11 (SCL11)~ unknown_gene~ complete;original_location=complement(join(1359162..1359203%2C1358788..1358894%2C1357297..1357378%2C1357110..1357195%2C1356401..1356653));owner=coffea | |
| 17411 chr1 manual_curation exon 31543762 31544192 . - . Parent=GSCOCT00028268001 | |
| 17412 chr1 manual_curation exon 31544649 31544734 . - . Parent=GSCOCT00028268001 | |
| 17413 chr1 manual_curation exon 31544836 31544917 . - . Parent=GSCOCT00028268001 | |
| 17414 chr1 manual_curation exon 31546327 31546433 . - . Parent=GSCOCT00028268001 | |
| 17415 chr1 manual_curation exon 31546701 31546890 . - . Parent=GSCOCT00028268001 | |
| 17416 chr1 manual_curation CDS 31543940 31544192 . - 2 Parent=GSCOCT00028268001 | |
| 17417 chr1 manual_curation CDS 31544649 31544734 . - 0 Parent=GSCOCT00028268001 | |
| 17418 chr1 manual_curation CDS 31544836 31544917 . - 2 Parent=GSCOCT00028268001 | |
| 17419 chr1 manual_curation CDS 31546327 31546433 . - 0 Parent=GSCOCT00028268001 | |
| 17420 chr1 manual_curation CDS 31546701 31546742 . - 0 Parent=GSCOCT00028268001 | |
| 17421 chr1 manual_curation gene 31549096 31550161 . + . ID=GSCOCG00028269001;Name=Cc01_g13090 | |
| 17422 chr1 manual_curation mRNA 31549096 31550161 . + . ID=GSCOCT00028269001;Parent=GSCOCG00028269001;Name=Cc01_g13090 | |
| 17423 chr1 manual_curation polypeptide 31549096 31550161 . + . ID=GSCOCP00028269001;Dbxref=SwissProt:Q0JIC2,TrEMBL:A1Z369,TrEMBL:B9GEM7,TrEMBL:F6HAD1;Derives_from=GSCOCT00028269001;Name=Cc01_g13090;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:GAMYB-like2,CC_functional_completeness:fragment,CC_gene:GAM1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028269001~ GAMYB-like2~ GAM1~ fragment;original_location=join(1361557..1361594%2C1361687..1362333%2C1362438..1362622);owner=coffea | |
| 17424 chr1 manual_curation exon 31549096 31549133 . + . Parent=GSCOCT00028269001 | |
| 17425 chr1 manual_curation exon 31549226 31549872 . + . Parent=GSCOCT00028269001 | |
| 17426 chr1 manual_curation exon 31549977 31550161 . + . Parent=GSCOCT00028269001 | |
| 17427 chr1 manual_curation CDS 31549096 31549133 . + 0 Parent=GSCOCT00028269001 | |
| 17428 chr1 manual_curation CDS 31549226 31549872 . + 2 Parent=GSCOCT00028269001 | |
| 17429 chr1 manual_curation CDS 31549977 31550161 . + 1 Parent=GSCOCT00028269001 | |
| 17430 chr1 manual_curation gene 31550618 31553792 . + . ID=GSCOCG00028270001;Name=Cc01_g13100 | |
| 17431 chr1 manual_curation mRNA 31550618 31553792 . + . ID=GSCOCT00028270001;Parent=GSCOCG00028270001;Name=Cc01_g13100 | |
| 17432 chr1 manual_curation polypeptide 31550833 31553466 . + . ID=GSCOCP00028270001;Dbxref=InterPro:IPR004854,PANTHER:PTHR12555,PFAM:PF03152,SwissProt:P70362,SwissProt:Q55BK0,SwissProt:Q9ES53,TAIR:AT2G21270.3,TAIR:AT2G29070.2,TAIR:AT4G38930.2,TrEMBL:A9PDL8,TrEMBL:B9GJA6,TrEMBL:B9T677;Derives_from=GSCOCT00028270001;Name=Cc01_g13100;Ontology_term=CC_evidence_code:ISS,GO:0006511,CC_EC_number:missing_EC_number,PRODUCT:Putative Ubiquitin fusion degradation protein 1 homolog,CC_functional_completeness:complete,CC_gene:Ufd1l,CC_gene:ufd1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028270001~ Putative Ubiquitin fusion degradation protein 1 homolog~ Ufd1l~ complete;original_location=join(1363294..1363329%2C1363509..1363556%2C1364037..1364114%2C1364383..1364407%2C1364511..1364543%2C1364682..1364803%2C1364894..1365024%2C1365112..1365335%2C1365438..1365682%2C1365835..1365927);owner=coffea | |
| 17433 chr1 manual_curation exon 31550618 31550868 . + . Parent=GSCOCT00028270001 | |
| 17434 chr1 manual_curation exon 31551048 31551095 . + . Parent=GSCOCT00028270001 | |
| 17435 chr1 manual_curation exon 31551576 31551653 . + . Parent=GSCOCT00028270001 | |
| 17436 chr1 manual_curation exon 31551922 31551946 . + . Parent=GSCOCT00028270001 | |
| 17437 chr1 manual_curation exon 31552050 31552082 . + . Parent=GSCOCT00028270001 | |
| 17438 chr1 manual_curation exon 31552221 31552342 . + . Parent=GSCOCT00028270001 | |
| 17439 chr1 manual_curation exon 31552433 31552563 . + . Parent=GSCOCT00028270001 | |
| 17440 chr1 manual_curation exon 31552651 31552874 . + . Parent=GSCOCT00028270001 | |
| 17441 chr1 manual_curation exon 31552977 31553221 . + . Parent=GSCOCT00028270001 | |
| 17442 chr1 manual_curation exon 31553374 31553792 . + . Parent=GSCOCT00028270001 | |
| 17443 chr1 manual_curation CDS 31550833 31550868 . + 0 Parent=GSCOCT00028270001 | |
| 17444 chr1 manual_curation CDS 31551048 31551095 . + 0 Parent=GSCOCT00028270001 | |
| 17445 chr1 manual_curation CDS 31551576 31551653 . + 0 Parent=GSCOCT00028270001 | |
| 17446 chr1 manual_curation CDS 31551922 31551946 . + 0 Parent=GSCOCT00028270001 | |
| 17447 chr1 manual_curation CDS 31552050 31552082 . + 1 Parent=GSCOCT00028270001 | |
| 17448 chr1 manual_curation CDS 31552221 31552342 . + 1 Parent=GSCOCT00028270001 | |
| 17449 chr1 manual_curation CDS 31552433 31552563 . + 0 Parent=GSCOCT00028270001 | |
| 17450 chr1 manual_curation CDS 31552651 31552874 . + 2 Parent=GSCOCT00028270001 | |
| 17451 chr1 manual_curation CDS 31552977 31553221 . + 1 Parent=GSCOCT00028270001 | |
| 17452 chr1 manual_curation CDS 31553374 31553466 . + 0 Parent=GSCOCT00028270001 | |
| 17453 chr1 manual_curation gene 31555634 31558233 . + . ID=GSCOCG00028271001;Name=Cc01_g13110 | |
| 17454 chr1 manual_curation mRNA 31555634 31558233 . + . ID=GSCOCT00028271001;Parent=GSCOCG00028271001;Name=Cc01_g13110 | |
| 17455 chr1 manual_curation polypeptide 31555634 31557916 . + . ID=GSCOCP00028271001;Dbxref=GENE3D:G3DSA:2.60.40.420,InterPro:IPR001117,InterPro:IPR002355,InterPro:IPR008972,InterPro:IPR011706,InterPro:IPR011707,InterPro:IPR017761,PFAM:PF00394,PFAM:PF07731,PFAM:PF07732,PROSITE:PS00080,SUPERFAMILY:SSF49503,SwissProt:Q56YT0,SwissProt:Q9FLB5,SwissProt:Q9SIY8,TAIR:AT2G30210.1,TAIR:AT2G40370.1,TAIR:AT5G05390.1,TIGRFAMs:TIGR03389,TrEMBL:B9I6L0,TrEMBL:B9RRH6,TrEMBL:F6GUI5;Derives_from=GSCOCT00028271001;Name=Cc01_g13110;Ontology_term=CC_evidence_code:ISS,GO:0005507,GO:0008471,GO:0016491,GO:0046274,GO:0048046,GO:0055114,CC_EC_number:1.10.3.3,PRODUCT:Laccase-3,CC_functional_completeness:complete,CC_gene:LAC3,CC_gene:LAC12,CC_gene:LAC5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028271001~ Laccase-3~ LAC3~ complete;original_location=join(1368095..1368193%2C1368326..1368477%2C1368632..1368876%2C1368963..1369091%2C1369188..1370141%2C1370247..1370377);owner=coffea | |
| 17456 chr1 manual_curation exon 31555634 31555732 . + . Parent=GSCOCT00028271001 | |
| 17457 chr1 manual_curation exon 31555865 31556016 . + . Parent=GSCOCT00028271001 | |
| 17458 chr1 manual_curation exon 31556171 31556415 . + . Parent=GSCOCT00028271001 | |
| 17459 chr1 manual_curation exon 31556502 31556630 . + . Parent=GSCOCT00028271001 | |
| 17460 chr1 manual_curation exon 31556727 31557680 . + . Parent=GSCOCT00028271001 | |
| 17461 chr1 manual_curation exon 31557786 31558233 . + . Parent=GSCOCT00028271001 | |
| 17462 chr1 manual_curation CDS 31555634 31555732 . + 0 Parent=GSCOCT00028271001 | |
| 17463 chr1 manual_curation CDS 31555865 31556016 . + 0 Parent=GSCOCT00028271001 | |
| 17464 chr1 manual_curation CDS 31556171 31556415 . + 2 Parent=GSCOCT00028271001 | |
| 17465 chr1 manual_curation CDS 31556502 31556630 . + 1 Parent=GSCOCT00028271001 | |
| 17466 chr1 manual_curation CDS 31556727 31557680 . + 1 Parent=GSCOCT00028271001 | |
| 17467 chr1 manual_curation CDS 31557786 31557916 . + 1 Parent=GSCOCT00028271001 | |
| 17468 chr1 manual_curation gene 31558694 31563397 . - . ID=GSCOCG00028272001;Name=Cc01_g13120 | |
| 17469 chr1 manual_curation mRNA 31558694 31563397 . - . ID=GSCOCT00028272001;Parent=GSCOCG00028272001;Name=Cc01_g13120 | |
| 17470 chr1 manual_curation polypeptide 31559326 31562523 . - . ID=GSCOCP00028272001;Dbxref=InterPro:IPR005062,PFAM:PF03399,SwissProt:O60318,SwissProt:O74889,SwissProt:Q9WUU9,TAIR:AT3G06290.1,TAIR:AT3G54380.1,TrEMBL:D7UD22,TrEMBL:F6HD15,TrEMBL:F6I6M3;Derives_from=GSCOCT00028272001;Name=Cc01_g13120;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:SAC3/GANP/Nin1/mts3/eIF-3 p25 family,CC_functional_completeness:complete,CC_gene:SPCC576.05,CC_gene:Mcm3ap,CC_gene:MCM3AP;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028272001~ SAC3/GANP/Nin1/mts3/eIF-3 p25 family~ SPCC576.05~ complete;original_location=complement(join(1374690..1374984%2C1374406..1374506%2C1373769..1373990%2C1373465..1373680%2C1373278..1373363%2C1373021..1373117%2C1372431..1372523%2C1372198..1372352%2C1371787..1371814));owner=coffea | |
| 17471 chr1 manual_curation exon 31558694 31559353 . - . Parent=GSCOCT00028272001 | |
| 17472 chr1 manual_curation exon 31559737 31559891 . - . Parent=GSCOCT00028272001 | |
| 17473 chr1 manual_curation exon 31559970 31560062 . - . Parent=GSCOCT00028272001 | |
| 17474 chr1 manual_curation exon 31560560 31560656 . - . Parent=GSCOCT00028272001 | |
| 17475 chr1 manual_curation exon 31560817 31560902 . - . Parent=GSCOCT00028272001 | |
| 17476 chr1 manual_curation exon 31561004 31561219 . - . Parent=GSCOCT00028272001 | |
| 17477 chr1 manual_curation exon 31561308 31561529 . - . Parent=GSCOCT00028272001 | |
| 17478 chr1 manual_curation exon 31561945 31562045 . - . Parent=GSCOCT00028272001 | |
| 17479 chr1 manual_curation exon 31562229 31563397 . - . Parent=GSCOCT00028272001 | |
| 17480 chr1 manual_curation CDS 31559326 31559353 . - 2 Parent=GSCOCT00028272001 | |
| 17481 chr1 manual_curation CDS 31559737 31559891 . - 0 Parent=GSCOCT00028272001 | |
| 17482 chr1 manual_curation CDS 31559970 31560062 . - 0 Parent=GSCOCT00028272001 | |
| 17483 chr1 manual_curation CDS 31560560 31560656 . - 2 Parent=GSCOCT00028272001 | |
| 17484 chr1 manual_curation CDS 31560817 31560902 . - 0 Parent=GSCOCT00028272001 | |
| 17485 chr1 manual_curation CDS 31561004 31561219 . - 0 Parent=GSCOCT00028272001 | |
| 17486 chr1 manual_curation CDS 31561308 31561529 . - 0 Parent=GSCOCT00028272001 | |
| 17487 chr1 manual_curation CDS 31561945 31562045 . - 1 Parent=GSCOCT00028272001 | |
| 17488 chr1 manual_curation CDS 31562229 31562523 . - 0 Parent=GSCOCT00028272001 | |
| 17489 chr1 manual_curation gene 31564381 31567351 . - . ID=GSCOCG00028273001;Name=Cc01_g13130 | |
| 17490 chr1 manual_curation mRNA 31564381 31567351 . - . ID=GSCOCT00028273001;Parent=GSCOCG00028273001;Name=Cc01_g13130 | |
| 17491 chr1 manual_curation polypeptide 31564601 31566183 . - . ID=GSCOCP00028273001;Dbxref=InterPro:IPR005834,InterPro:IPR006402,InterPro:IPR010237,PFAM:PF00702,SwissProt:P40025,SwissProt:P53078,SwissProt:Q09893,TAIR:AT5G02230.1,TAIR:AT5G59480.1,TAIR:AT5G59490.1,TIGRFAMs:TIGR01509,TIGRFAMs:TIGR01993,TrEMBL:A9PFH3,TrEMBL:B9T676,TrEMBL:F6GUZ6;Derives_from=GSCOCT00028273001;Name=Cc01_g13130;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,GO:0016787,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized protein C24B11.05,CC_functional_completeness:complete,CC_gene:SPAC24B11.05,CC_gene:SDT1,CC_gene:PHM8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028273001~ Putative Uncharacterized protein C24B11.05~ SPAC24B11.05~ complete;original_location=complement(join(1378587..1378644%2C1378430..1378495%2C1378210..1378307%2C1378073..1378110%2C1377906..1377993%2C1377677..1377812%2C1377501..1377595%2C1377312..1377377%2C1377062..1377214));owner=coffea | |
| 17492 chr1 manual_curation exon 31564381 31564753 . - . Parent=GSCOCT00028273001 | |
| 17493 chr1 manual_curation exon 31564851 31564916 . - . Parent=GSCOCT00028273001 | |
| 17494 chr1 manual_curation exon 31565040 31565134 . - . Parent=GSCOCT00028273001 | |
| 17495 chr1 manual_curation exon 31565216 31565351 . - . Parent=GSCOCT00028273001 | |
| 17496 chr1 manual_curation exon 31565445 31565532 . - . Parent=GSCOCT00028273001 | |
| 17497 chr1 manual_curation exon 31565612 31565649 . - . Parent=GSCOCT00028273001 | |
| 17498 chr1 manual_curation exon 31565749 31565846 . - . Parent=GSCOCT00028273001 | |
| 17499 chr1 manual_curation exon 31565969 31566034 . - . Parent=GSCOCT00028273001 | |
| 17500 chr1 manual_curation exon 31566126 31567351 . - . Parent=GSCOCT00028273001 | |
| 17501 chr1 manual_curation CDS 31564601 31564753 . - 0 Parent=GSCOCT00028273001 | |
| 17502 chr1 manual_curation CDS 31564851 31564916 . - 0 Parent=GSCOCT00028273001 | |
| 17503 chr1 manual_curation CDS 31565040 31565134 . - 1 Parent=GSCOCT00028273001 | |
| 17504 chr1 manual_curation CDS 31565216 31565351 . - 0 Parent=GSCOCT00028273001 | |
| 17505 chr1 manual_curation CDS 31565445 31565532 . - 2 Parent=GSCOCT00028273001 | |
| 17506 chr1 manual_curation CDS 31565612 31565649 . - 0 Parent=GSCOCT00028273001 | |
| 17507 chr1 manual_curation CDS 31565749 31565846 . - 1 Parent=GSCOCT00028273001 | |
| 17508 chr1 manual_curation CDS 31565969 31566034 . - 1 Parent=GSCOCT00028273001 | |
| 17509 chr1 manual_curation CDS 31566126 31566183 . - 0 Parent=GSCOCT00028273001 | |
| 17510 chr1 manual_curation gene 31570762 31577236 . - . ID=GSCOCG00028274001;Name=Cc01_g13140 | |
| 17511 chr1 manual_curation mRNA 31570762 31577236 . - . ID=GSCOCT00028274001;Parent=GSCOCG00028274001;Name=Cc01_g13140 | |
| 17512 chr1 manual_curation polypeptide 31571251 31576934 . - . ID=GSCOCP00028274001;Dbxref=InterPro:IPR000642,InterPro:IPR003593,InterPro:IPR003959,InterPro:IPR003960,InterPro:IPR005936,InterPro:IPR011546,PFAM:PF00004,PFAM:PF01434,PFAM:PF06480,PROSITE:PS00674,SMART:SM00382,SwissProt:Q0DHL4,SwissProt:Q84WU8,SwissProt:Q8VZI8,TAIR:AT1G07510.1,TAIR:AT1G50250.1,TAIR:AT2G29080.1,TIGRFAMs:TIGR01241,TrEMBL:B9IFV8,TrEMBL:D7KH32,TrEMBL:D7SKC8;Derives_from=GSCOCT00028274001;Name=Cc01_g13140;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0004222,GO:0005524,GO:0006508,GO:0008270,GO:0016020,GO:0016021,GO:0017111,GO:0030163,CC_EC_number:3.6.4.3,CC_EC_number:3.6.4.3,PRODUCT:ATP-dependent zinc metalloprotease FTSH 10%2C mitochondrial,CC_functional_completeness:complete,CC_gene:FTSH10,CC_gene:FTSH8,CC_gene:FTSH3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028274001~ ATP-dependent zinc metalloprotease FTSH 10%2C mitochondrial~ FTSH10~ complete;original_location=complement(join(1389345..1389395%2C1388984..1389233%2C1388804..1388875%2C1387955..1388088%2C1385980..1386465%2C1385059..1385826%2C1384694..1384921%2C1383712..1384188));owner=coffea | |
| 17513 chr1 manual_curation exon 31570762 31571727 . - . Parent=GSCOCT00028274001 | |
| 17514 chr1 manual_curation exon 31572233 31572460 . - . Parent=GSCOCT00028274001 | |
| 17515 chr1 manual_curation exon 31572598 31573365 . - . Parent=GSCOCT00028274001 | |
| 17516 chr1 manual_curation exon 31573519 31574004 . - . Parent=GSCOCT00028274001 | |
| 17517 chr1 manual_curation exon 31575494 31575627 . - . Parent=GSCOCT00028274001 | |
| 17518 chr1 manual_curation exon 31576343 31576414 . - . Parent=GSCOCT00028274001 | |
| 17519 chr1 manual_curation exon 31576523 31576772 . - . Parent=GSCOCT00028274001 | |
| 17520 chr1 manual_curation exon 31576884 31577236 . - . Parent=GSCOCT00028274001 | |
| 17521 chr1 manual_curation CDS 31571251 31571727 . - 0 Parent=GSCOCT00028274001 | |
| 17522 chr1 manual_curation CDS 31572233 31572460 . - 0 Parent=GSCOCT00028274001 | |
| 17523 chr1 manual_curation CDS 31572598 31573365 . - 0 Parent=GSCOCT00028274001 | |
| 17524 chr1 manual_curation CDS 31573519 31574004 . - 0 Parent=GSCOCT00028274001 | |
| 17525 chr1 manual_curation CDS 31575494 31575627 . - 1 Parent=GSCOCT00028274001 | |
| 17526 chr1 manual_curation CDS 31576343 31576414 . - 1 Parent=GSCOCT00028274001 | |
| 17527 chr1 manual_curation CDS 31576523 31576772 . - 0 Parent=GSCOCT00028274001 | |
| 17528 chr1 manual_curation CDS 31576884 31576934 . - 0 Parent=GSCOCT00028274001 | |
| 17529 chr1 manual_curation gene 31580212 31581814 . + . ID=GSCOCG00028276001;Name=Cc01_g13150 | |
| 17530 chr1 manual_curation mRNA 31580212 31581814 . + . ID=GSCOCT00028276001;Parent=GSCOCG00028276001;Name=Cc01_g13150 | |
| 17531 chr1 manual_curation polypeptide 31580327 31581538 . + . ID=GSCOCP00028276001;Dbxref=TAIR:AT5G59500.1,TrEMBL:B9HPE9,TrEMBL:F6GUZ5,TrEMBL:I1KVX6;Derives_from=GSCOCT00028276001;Name=Cc01_g13150;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferases,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028276001~ protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferases~ unknown_gene~ complete;original_location=1392788..1393999;owner=coffea | |
| 17532 chr1 manual_curation exon 31580212 31581814 . + . Parent=GSCOCT00028276001 | |
| 17533 chr1 manual_curation CDS 31580327 31581538 . + 0 Parent=GSCOCT00028276001 | |
| 17534 chr1 manual_curation gene 31585838 31590901 . - . ID=GSCOCG00028278001;Name=Cc01_g13160 | |
| 17535 chr1 manual_curation mRNA 31585838 31590901 . - . ID=GSCOCT00028278001;Parent=GSCOCG00028278001;Name=Cc01_g13160 | |
| 17536 chr1 manual_curation polypeptide 31585977 31590646 . - . ID=GSCOCP00028278001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:O81077,SwissProt:Q949P1,SwissProt:Q9FH76,TAIR:AT2G29090.1,TAIR:AT4G19230.2,TAIR:AT5G45340.1,TrEMBL:B9GJA3,TrEMBL:B9HPE8,TrEMBL:H2BIS8;Derives_from=GSCOCT00028278001;Name=Cc01_g13160;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.79,PRODUCT:Abscisic acid 8'-hydroxylase 2,CC_functional_completeness:complete,CC_gene:CYP707A2,CC_gene:CYP707A1,CC_gene:CYP707A3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028278001~ Abscisic acid 8'-hydroxylase 2~ CYP707A2~ complete;original_location=complement(join(1403028..1403107%2C1402577..1402895%2C1402305..1402457%2C1401423..1401677%2C1401130..1401219%2C1400833..1401018%2C1400176..1400294%2C1398438..1398540));owner=coffea | |
| 17537 chr1 manual_curation exon 31585838 31586079 . - . Parent=GSCOCT00028278001 | |
| 17538 chr1 manual_curation exon 31587715 31587833 . - . Parent=GSCOCT00028278001 | |
| 17539 chr1 manual_curation exon 31588372 31588557 . - . Parent=GSCOCT00028278001 | |
| 17540 chr1 manual_curation exon 31588669 31588758 . - . Parent=GSCOCT00028278001 | |
| 17541 chr1 manual_curation exon 31588962 31589216 . - . Parent=GSCOCT00028278001 | |
| 17542 chr1 manual_curation exon 31589844 31589996 . - . Parent=GSCOCT00028278001 | |
| 17543 chr1 manual_curation exon 31590116 31590434 . - . Parent=GSCOCT00028278001 | |
| 17544 chr1 manual_curation exon 31590567 31590901 . - . Parent=GSCOCT00028278001 | |
| 17545 chr1 manual_curation CDS 31585977 31586079 . - 2 Parent=GSCOCT00028278001 | |
| 17546 chr1 manual_curation CDS 31587715 31587833 . - 0 Parent=GSCOCT00028278001 | |
| 17547 chr1 manual_curation CDS 31588372 31588557 . - 0 Parent=GSCOCT00028278001 | |
| 17548 chr1 manual_curation CDS 31588669 31588758 . - 0 Parent=GSCOCT00028278001 | |
| 17549 chr1 manual_curation CDS 31588962 31589216 . - 0 Parent=GSCOCT00028278001 | |
| 17550 chr1 manual_curation CDS 31589844 31589996 . - 0 Parent=GSCOCT00028278001 | |
| 17551 chr1 manual_curation CDS 31590116 31590434 . - 2 Parent=GSCOCT00028278001 | |
| 17552 chr1 manual_curation CDS 31590567 31590646 . - 0 Parent=GSCOCT00028278001 | |
| 17553 chr1 manual_curation gene 31602805 31603427 . + . ID=GSCOCG00028280001;Name=Cc01_g13170 | |
| 17554 chr1 manual_curation mRNA 31602805 31603427 . + . ID=GSCOCT00028280001;Parent=GSCOCG00028280001;Name=Cc01_g13170 | |
| 17555 chr1 manual_curation polypeptide 31602946 31603152 . + . ID=GSCOCP00028280001;Derives_from=GSCOCT00028280001;Name=Cc01_g13170;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028280001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1415407..1415613;owner=coffea | |
| 17556 chr1 manual_curation exon 31602805 31603427 . + . Parent=GSCOCT00028280001 | |
| 17557 chr1 manual_curation CDS 31602946 31603152 . + 0 Parent=GSCOCT00028280001 | |
| 17558 chr1 manual_curation gene 31608464 31609902 . + . ID=GSCOCG00028281001;Name=Cc01_g13180 | |
| 17559 chr1 manual_curation mRNA 31608464 31609902 . + . ID=GSCOCT00028281001;Parent=GSCOCG00028281001;Name=Cc01_g13180 | |
| 17560 chr1 manual_curation polypeptide 31608615 31608974 . + . ID=GSCOCP00028281001;Dbxref=InterPro:IPR012552,PFAM:PF08137,TAIR:AT5G59510.1,TrEMBL:B9GJA2,TrEMBL:F5C0G8;Derives_from=GSCOCT00028281001;Name=Cc01_g13180;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:RTL5-like protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028281001~ RTL5-like protein~ unknown_gene~ complete;original_location=join(1421076..1421197%2C1421243..1421435);owner=coffea | |
| 17561 chr1 manual_curation exon 31608464 31608736 . + . Parent=GSCOCT00028281001 | |
| 17562 chr1 manual_curation exon 31608782 31609902 . + . Parent=GSCOCT00028281001 | |
| 17563 chr1 manual_curation CDS 31608615 31608736 . + 0 Parent=GSCOCT00028281001 | |
| 17564 chr1 manual_curation CDS 31608782 31608974 . + 2 Parent=GSCOCT00028281001 | |
| 17565 chr1 manual_curation gene 31613973 31616835 . - . ID=GSCOCG00028282001;Name=Cc01_g13190 | |
| 17566 chr1 manual_curation mRNA 31613973 31616835 . - . ID=GSCOCT00028282001;Parent=GSCOCG00028282001;Name=Cc01_g13190 | |
| 17567 chr1 manual_curation polypeptide 31614336 31616667 . - . ID=GSCOCP00028282001;Dbxref=GENE3D:G3DSA:2.60.40.420,InterPro:IPR001117,InterPro:IPR002355,InterPro:IPR008972,InterPro:IPR011706,InterPro:IPR011707,InterPro:IPR017761,PFAM:PF00394,PFAM:PF07731,PFAM:PF07732,PROSITE:PS00079,PROSITE:PS00080,SUPERFAMILY:SSF49503,SwissProt:O81081,SwissProt:Q5N9X2,SwissProt:Q9FJD5,TAIR:AT2G29130.1,TAIR:AT2G38080.1,TAIR:AT5G60020.1,TIGRFAMs:TIGR03389,TrEMBL:B9GIL1,TrEMBL:B9HPE5,TrEMBL:F6HNV9;Derives_from=GSCOCT00028282001;Name=Cc01_g13190;Ontology_term=CC_evidence_code:ISS,GO:0005507,GO:0008471,GO:0016491,GO:0046274,GO:0048046,GO:0055114,CC_EC_number:1.10.3.3,PRODUCT:Laccase-2,CC_functional_completeness:complete,CC_gene:LAC2,CC_gene:LAC17,CC_gene:LAC4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028282001~ Laccase-2~ LAC2~ complete;original_location=complement(join(1428997..1429128%2C1428728..1428879%2C1428407..1428651%2C1428190..1428318%2C1427131..1428105%2C1426797..1426927));owner=coffea | |
| 17568 chr1 manual_curation exon 31613973 31614466 . - . Parent=GSCOCT00028282001 | |
| 17569 chr1 manual_curation exon 31614670 31615644 . - . Parent=GSCOCT00028282001 | |
| 17570 chr1 manual_curation exon 31615729 31615857 . - . Parent=GSCOCT00028282001 | |
| 17571 chr1 manual_curation exon 31615946 31616190 . - . Parent=GSCOCT00028282001 | |
| 17572 chr1 manual_curation exon 31616267 31616418 . - . Parent=GSCOCT00028282001 | |
| 17573 chr1 manual_curation exon 31616536 31616835 . - . Parent=GSCOCT00028282001 | |
| 17574 chr1 manual_curation CDS 31614336 31614466 . - 1 Parent=GSCOCT00028282001 | |
| 17575 chr1 manual_curation CDS 31614670 31615644 . - 1 Parent=GSCOCT00028282001 | |
| 17576 chr1 manual_curation CDS 31615729 31615857 . - 1 Parent=GSCOCT00028282001 | |
| 17577 chr1 manual_curation CDS 31615946 31616190 . - 2 Parent=GSCOCT00028282001 | |
| 17578 chr1 manual_curation CDS 31616267 31616418 . - 0 Parent=GSCOCT00028282001 | |
| 17579 chr1 manual_curation CDS 31616536 31616667 . - 0 Parent=GSCOCT00028282001 | |
| 17580 chr1 manual_curation gene 31618682 31620466 . - . ID=GSCOCG00028283001;Name=Cc01_g13200 | |
| 17581 chr1 manual_curation mRNA 31618682 31620466 . - . ID=GSCOCT00028283001;Parent=GSCOCG00028283001;Name=Cc01_g13200 | |
| 17582 chr1 manual_curation polypeptide 31618953 31620466 . - . ID=GSCOCP00028283001;Dbxref=InterPro:IPR003689,PFAM:PF02535,SwissProt:Q852F6,SwissProt:Q94DG6,SwissProt:Q94EG9,TAIR:AT1G55910.1,TAIR:AT4G19690.2,TAIR:AT5G59520.1,TrEMBL:B9S3H1,TrEMBL:F6GUZ4,TrEMBL:I1MDD2;Derives_from=GSCOCT00028283001;Name=Cc01_g13200;Ontology_term=CC_evidence_code:ISS,GO:0016020,GO:0030001,GO:0046873,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Zinc transporter 1,CC_functional_completeness:complete,CC_gene:ZIP1,CC_gene:ZIP2,CC_gene:ZIP11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028283001~ Zinc transporter 1~ ZIP1~ complete;original_location=complement(join(1432303..1432927%2C1431414..1431805));owner=coffea | |
| 17583 chr1 manual_curation exon 31618682 31619344 . - . Parent=GSCOCT00028283001 | |
| 17584 chr1 manual_curation exon 31619842 31620466 . - . Parent=GSCOCT00028283001 | |
| 17585 chr1 manual_curation CDS 31618953 31619344 . - 1 Parent=GSCOCT00028283001 | |
| 17586 chr1 manual_curation CDS 31619842 31620466 . - 0 Parent=GSCOCT00028283001 | |
| 17587 chr1 manual_curation gene 31627028 31629552 . - . ID=GSCOCG00028284001;Name=Cc01_g13210 | |
| 17588 chr1 manual_curation mRNA 31627028 31629552 . - . ID=GSCOCT00028284001;Parent=GSCOCG00028284001;Name=Cc01_g13210 | |
| 17589 chr1 manual_curation polypeptide 31627364 31628849 . - . ID=GSCOCP00028284001;Dbxref=InterPro:IPR003103,InterPro:IPR019955,PFAM:PF02179,PROFILE:PS50053,PROFILE:PS51035,SMART:SM00264,SwissProt:Q0WPX7,SwissProt:Q0WUQ1,SwissProt:Q9LYP4,TAIR:AT5G07220.1,TAIR:AT5G52060.1,TAIR:AT5G62100.1,TrEMBL:B9ID06,TrEMBL:B9R9G5,TrEMBL:F6HP64;Derives_from=GSCOCT00028284001;Name=Cc01_g13210;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0006915,CC_EC_number:missing_EC_number,PRODUCT:BAG family molecular chaperone regulator 1,CC_functional_completeness:complete,CC_gene:BAG1,CC_gene:BAG3,CC_gene:BAG2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028284001~ BAG family molecular chaperone regulator 1~ BAG1~ complete;original_location=complement(join(1441061..1441310%2C1440705..1440961%2C1440323..1440469%2C1439825..1440232));owner=coffea | |
| 17590 chr1 manual_curation exon 31629005 31629552 . - . Parent=GSCOCT00028284001 | |
| 17591 chr1 manual_curation exon 31627028 31627771 . - . Parent=GSCOCT00028284001 | |
| 17592 chr1 manual_curation exon 31627862 31628008 . - . Parent=GSCOCT00028284001 | |
| 17593 chr1 manual_curation exon 31628244 31628500 . - . Parent=GSCOCT00028284001 | |
| 17594 chr1 manual_curation exon 31628600 31628901 . - . Parent=GSCOCT00028284001 | |
| 17595 chr1 manual_curation CDS 31627364 31627771 . - 0 Parent=GSCOCT00028284001 | |
| 17596 chr1 manual_curation CDS 31627862 31628008 . - 0 Parent=GSCOCT00028284001 | |
| 17597 chr1 manual_curation CDS 31628244 31628500 . - 1 Parent=GSCOCT00028284001 | |
| 17598 chr1 manual_curation CDS 31628600 31628849 . - 0 Parent=GSCOCT00028284001 | |
| 17599 chr1 manual_curation gene 31633593 31634826 . - . ID=GSCOCG00028286001;Name=Cc01_g13220 | |
| 17600 chr1 manual_curation mRNA 31633593 31634826 . - . ID=GSCOCT00028286001;Parent=GSCOCG00028286001;Name=Cc01_g13220 | |
| 17601 chr1 manual_curation polypeptide 31633593 31634747 . - . ID=GSCOCP00028286001;Dbxref=InterPro:IPR001841,InterPro:IPR010543,InterPro:IPR018957,PFAM:PF00097,PFAM:PF06547,PROFILE:PS50089,SMART:SM00184,SwissProt:P0CH30,SwissProt:Q6DIP3,SwissProt:Q8LPN7,TAIR:AT2G39720.1,TAIR:AT3G46620.1,TAIR:AT5G59550.1,TrEMBL:A5BC54,TrEMBL:F6GUZ2,TrEMBL:G7JCE1;Derives_from=GSCOCT00028286001;Name=Cc01_g13220;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative RING-H2 finger C2A,CC_functional_completeness:modules,CC_gene:RING1,CC_gene:At3g19950,CC_gene:rnf126;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028286001~ Putative RING-H2 finger C2A~ RING1~ modules;original_location=complement(1446054..1447208);owner=coffea | |
| 17602 chr1 manual_curation exon 31633593 31634826 . - . Parent=GSCOCT00028286001 | |
| 17603 chr1 manual_curation CDS 31633593 31634747 . - 0 Parent=GSCOCT00028286001 | |
| 17604 chr1 manual_curation gene 31643278 31650444 . + . ID=GSCOCG00028287001;Name=Cc01_g13230 | |
| 17605 chr1 manual_curation mRNA 31643278 31650444 . + . ID=GSCOCT00028287001;Parent=GSCOCG00028287001;Name=Cc01_g13230 | |
| 17606 chr1 manual_curation polypeptide 31643846 31649993 . + . ID=GSCOCP00028287001;Dbxref=GENE3D:G3DSA:1.25.10.10,InterPro:IPR001313,InterPro:IPR011989,InterPro:IPR012940,InterPro:IPR016024,PFAM:PF00806,PFAM:PF07990,PROFILE:PS50302,PROFILE:PS50303,SMART:SM00025,SUPERFAMILY:SSF48371,SwissProt:Q9ZW02,SwissProt:Q9ZW06,SwissProt:Q9ZW07,TAIR:AT2G29140.1,TAIR:AT2G29190.1,TAIR:AT2G29200.1,TrEMBL:A5BN72,TrEMBL:B9GJ97,TrEMBL:F6GUZ1;Derives_from=GSCOCT00028287001;Name=Cc01_g13230;Ontology_term=CC_evidence_code:ISS,GO:0003723,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:Pumilio homolog 2,CC_functional_completeness:complete,CC_gene:APUM2,CC_gene:APUM1,CC_gene:APUM3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028287001~ Pumilio homolog 2~ APUM2~ complete;original_location=join(1456307..1456945%2C1458236..1459707%2C1459784..1459925%2C1460048..1460155%2C1460322..1460534%2C1460634..1460744%2C1461441..1461635%2C1461830..1462004%2C1462417..1462454);owner=coffea | |
| 17607 chr1 manual_curation exon 31643278 31644484 . + . Parent=GSCOCT00028287001 | |
| 17608 chr1 manual_curation exon 31645775 31647246 . + . Parent=GSCOCT00028287001 | |
| 17609 chr1 manual_curation exon 31647323 31647464 . + . Parent=GSCOCT00028287001 | |
| 17610 chr1 manual_curation exon 31647587 31647694 . + . Parent=GSCOCT00028287001 | |
| 17611 chr1 manual_curation exon 31647861 31648073 . + . Parent=GSCOCT00028287001 | |
| 17612 chr1 manual_curation exon 31648173 31648283 . + . Parent=GSCOCT00028287001 | |
| 17613 chr1 manual_curation exon 31648980 31649174 . + . Parent=GSCOCT00028287001 | |
| 17614 chr1 manual_curation exon 31649369 31649543 . + . Parent=GSCOCT00028287001 | |
| 17615 chr1 manual_curation exon 31649956 31650444 . + . Parent=GSCOCT00028287001 | |
| 17616 chr1 manual_curation CDS 31643846 31644484 . + 0 Parent=GSCOCT00028287001 | |
| 17617 chr1 manual_curation CDS 31645775 31647246 . + 0 Parent=GSCOCT00028287001 | |
| 17618 chr1 manual_curation CDS 31647323 31647464 . + 2 Parent=GSCOCT00028287001 | |
| 17619 chr1 manual_curation CDS 31647587 31647694 . + 0 Parent=GSCOCT00028287001 | |
| 17620 chr1 manual_curation CDS 31647861 31648073 . + 0 Parent=GSCOCT00028287001 | |
| 17621 chr1 manual_curation CDS 31648173 31648283 . + 0 Parent=GSCOCT00028287001 | |
| 17622 chr1 manual_curation CDS 31648980 31649174 . + 0 Parent=GSCOCT00028287001 | |
| 17623 chr1 manual_curation CDS 31649369 31649543 . + 0 Parent=GSCOCT00028287001 | |
| 17624 chr1 manual_curation CDS 31649956 31649993 . + 1 Parent=GSCOCT00028287001 | |
| 17625 chr1 manual_curation gene 31651083 31651874 . - . ID=GSCOCG00028288001;Name=Cc01_g13240 | |
| 17626 chr1 manual_curation mRNA 31651083 31651874 . - . ID=GSCOCT00028288001;Parent=GSCOCG00028288001;Name=Cc01_g13240 | |
| 17627 chr1 manual_curation polypeptide 31651145 31651815 . - . ID=GSCOCP00028288001;Dbxref=TAIR:AT2G29180.1,TrEMBL:B2BXM8,TrEMBL:B9GJ96,TrEMBL:D7SKB9;Derives_from=GSCOCT00028288001;Name=Cc01_g13240;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028288001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=complement(join(1463959..1464276%2C1463606..1463785));owner=coffea | |
| 17628 chr1 manual_curation exon 31651083 31651324 . - . Parent=GSCOCT00028288001 | |
| 17629 chr1 manual_curation exon 31651498 31651874 . - . Parent=GSCOCT00028288001 | |
| 17630 chr1 manual_curation CDS 31651145 31651324 . - 0 Parent=GSCOCT00028288001 | |
| 17631 chr1 manual_curation CDS 31651498 31651815 . - 0 Parent=GSCOCT00028288001 | |
| 17632 chr1 manual_curation gene 31657058 31658861 . + . ID=GSCOCG00028289001;Name=Cc01_g13250 | |
| 17633 chr1 manual_curation mRNA 31657058 31658861 . + . ID=GSCOCT00028289001;Parent=GSCOCG00028289001;Name=Cc01_g13250 | |
| 17634 chr1 manual_curation polypeptide 31657058 31658143 . + . ID=GSCOCP00028289001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR006447,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR014778,InterPro:IPR017930,PFAM:PF00249,PROFILE:PS51294,SUPERFAMILY:SSF46689,SwissProt:Q940D0,SwissProt:Q9FGT7,SwissProt:Q9ZWJ9,TAIR:AT3G10760.1,TAIR:AT3G46640.3,TAIR:AT5G59570.1,TIGRFAMs:TIGR01557,TrEMBL:A5BDT9,TrEMBL:F6GUZ0,TrEMBL:Q4H2B1;Derives_from=GSCOCT00028289001;Name=Cc01_g13250;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative Homeodomain-like superfamily protein,CC_functional_completeness:complete,CC_gene:ARR1,CC_gene:ARR2,CC_gene:ARR18;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028289001~ Putative Homeodomain-like superfamily protein~ ARR1~ complete;original_location=1469519..1470604;owner=coffea | |
| 17635 chr1 manual_curation exon 31657058 31658861 . + . Parent=GSCOCT00028289001 | |
| 17636 chr1 manual_curation CDS 31657058 31658143 . + 0 Parent=GSCOCT00028289001 | |
| 17637 chr1 manual_curation gene 31660830 31662966 . - . ID=GSCOCG00028291001;Name=Cc01_g13260 | |
| 17638 chr1 manual_curation mRNA 31660830 31662966 . - . ID=GSCOCT00028291001;Parent=GSCOCG00028291001;Name=Cc01_g13260 | |
| 17639 chr1 manual_curation polypeptide 31660830 31662485 . - . ID=GSCOCP00028291001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:P0C899,SwissProt:Q3E6Q1,SwissProt:Q9FGR2,TAIR:AT1G11290.1,TAIR:AT3G49142.1,TAIR:AT5G59600.1,TIGRFAMs:TIGR00756,TrEMBL:A5BDU0,TrEMBL:B9S3G4,TrEMBL:I1LJY8;Derives_from=GSCOCT00028291001;Name=Cc01_g13260;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At5g59600,CC_functional_completeness:complete,CC_gene:PCMP-E1,CC_gene:PCMP-H77,CC_gene:PCMP-H40;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028291001~ Pentatricopeptide repeat-containing protein At5g59600~ PCMP-E1~ complete;original_location=complement(1473291..1474946);owner=coffea | |
| 17640 chr1 manual_curation exon 31662698 31662966 . - . Parent=GSCOCT00028291001 | |
| 17641 chr1 manual_curation exon 31660830 31662598 . - . Parent=GSCOCT00028291001 | |
| 17642 chr1 manual_curation CDS 31660830 31662485 . - 0 Parent=GSCOCT00028291001 | |
| 17643 chr1 manual_curation gene 31663435 31665816 . - . ID=GSCOCG00028292001;Name=Cc01_g13270 | |
| 17644 chr1 manual_curation mRNA 31663435 31665816 . - . ID=GSCOCT00028292001;Parent=GSCOCG00028292001;Name=Cc01_g13270 | |
| 17645 chr1 manual_curation polypeptide 31663435 31665816 . - . ID=GSCOCP00028292001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q9SMZ2,SwissProt:Q9SVP7,SwissProt:Q9ZUW3,TAIR:AT2G27610.1,TAIR:AT4G13650.1,TAIR:AT4G33170.1,TIGRFAMs:TIGR00756,TrEMBL:A5BDU0,TrEMBL:A9T938,TrEMBL:B8LQA8;Derives_from=GSCOCT00028292001;Name=Cc01_g13270;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Pentatricopeptide repeat-containing protein At4g13650,CC_functional_completeness:complete,CC_gene:PCMP-H42,CC_gene:PCMP-H60,CC_gene:PCMP-H53;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028292001~ Putative Pentatricopeptide repeat-containing protein At4g13650~ PCMP-H42~ complete;original_location=complement(join(1476190..1478277%2C1475896..1476159));owner=coffea | |
| 17646 chr1 manual_curation exon 31663435 31663698 . - . Parent=GSCOCT00028292001 | |
| 17647 chr1 manual_curation exon 31663729 31665816 . - . Parent=GSCOCT00028292001 | |
| 17648 chr1 manual_curation CDS 31663435 31663698 . - 0 Parent=GSCOCT00028292001 | |
| 17649 chr1 manual_curation CDS 31663729 31665816 . - 0 Parent=GSCOCT00028292001 | |
| 17650 chr1 manual_curation gene 31666357 31670713 . + . ID=GSCOCG00028293001;Name=Cc01_g13280 | |
| 17651 chr1 manual_curation mRNA 31666357 31670713 . + . ID=GSCOCT00028293001;Parent=GSCOCG00028293001;Name=Cc01_g13280 | |
| 17652 chr1 manual_curation polypeptide 31666457 31670205 . + . ID=GSCOCP00028293001;Dbxref=GENE3D:G3DSA:1.10.287.110,InterPro:IPR001623,InterPro:IPR003095,InterPro:IPR015609,PANTHER:PTHR11821,PFAM:PF00226,PRINTS:PR00625,PROFILE:PS50076,SMART:SM00271,SUPERFAMILY:SSF46565,SwissProt:B0CAZ0,SwissProt:Q114R3,SwissProt:Q9UXR9,TAIR:AT4G39960.1,TAIR:AT5G59610.1,TrEMBL:B9GMY1,TrEMBL:D7SKB6,TrEMBL:I1MDC5;Derives_from=GSCOCT00028293001;Name=Cc01_g13280;Ontology_term=CC_evidence_code:ISS,GO:0006457,GO:0031072,GO:0051082,CC_EC_number:missing_EC_number,PRODUCT:Chaperone DnaJ-domain superfamily protein,CC_functional_completeness:complete,CC_gene:dnaJ;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028293001~ Chaperone DnaJ-domain superfamily protein~ dnaJ~ complete;original_location=join(1478918..1479244%2C1481363..1481531%2C1481931..1481963%2C1482096..1482190%2C1482442..1482666);owner=coffea | |
| 17653 chr1 manual_curation exon 31666357 31666783 . + . Parent=GSCOCT00028293001 | |
| 17654 chr1 manual_curation exon 31668902 31669070 . + . Parent=GSCOCT00028293001 | |
| 17655 chr1 manual_curation exon 31669470 31669502 . + . Parent=GSCOCT00028293001 | |
| 17656 chr1 manual_curation exon 31669635 31669729 . + . Parent=GSCOCT00028293001 | |
| 17657 chr1 manual_curation exon 31669981 31670713 . + . Parent=GSCOCT00028293001 | |
| 17658 chr1 manual_curation CDS 31666457 31666783 . + 0 Parent=GSCOCT00028293001 | |
| 17659 chr1 manual_curation CDS 31668902 31669070 . + 0 Parent=GSCOCT00028293001 | |
| 17660 chr1 manual_curation CDS 31669470 31669502 . + 1 Parent=GSCOCT00028293001 | |
| 17661 chr1 manual_curation CDS 31669635 31669729 . + 1 Parent=GSCOCT00028293001 | |
| 17662 chr1 manual_curation CDS 31669981 31670205 . + 0 Parent=GSCOCT00028293001 | |
| 17663 chr1 manual_curation gene 31671598 31675943 . - . ID=GSCOCG00028294001;Name=Cc01_g13290 | |
| 17664 chr1 manual_curation mRNA 31671598 31675943 . - . ID=GSCOCT00028294001;Parent=GSCOCG00028294001;Name=Cc01_g13290 | |
| 17665 chr1 manual_curation polypeptide 31671866 31675943 . - . ID=GSCOCP00028294001;Dbxref=InterPro:IPR000184,InterPro:IPR005689,InterPro:IPR010827,PANTHER:PTHR12815,PFAM:PF01103,PFAM:PF07244,SwissProt:Q43715,SwissProt:Q84Q83,SwissProt:Q9STE8,TAIR:AT1G35860.1,TAIR:AT3G46740.1,TAIR:AT4G09080.1,TIGRFAMs:TIGR00992,TrEMBL:A5BDU2,TrEMBL:B9GMY2,TrEMBL:F6GUY8;Derives_from=GSCOCT00028294001;Name=Cc01_g13290;Ontology_term=CC_evidence_code:ISS,GO:0006886,GO:0015450,GO:0019867,CC_EC_number:missing_EC_number,PRODUCT:Protein TOC75-3%2C chloroplastic,CC_functional_completeness:complete,CC_gene:TOC75-3,CC_gene:TOC75;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028294001~ Protein TOC75-3%2C chloroplastic~ TOC75-3~ complete;original_location=complement(join(1487175..1488404%2C1486639..1486860%2C1486429..1486536%2C1486143..1486334%2C1485609..1485857%2C1484753..1485007%2C1484327..1484566));owner=coffea | |
| 17666 chr1 manual_curation exon 31671598 31672105 . - . Parent=GSCOCT00028294001 | |
| 17667 chr1 manual_curation exon 31672292 31672546 . - . Parent=GSCOCT00028294001 | |
| 17668 chr1 manual_curation exon 31673148 31673396 . - . Parent=GSCOCT00028294001 | |
| 17669 chr1 manual_curation exon 31673682 31673873 . - . Parent=GSCOCT00028294001 | |
| 17670 chr1 manual_curation exon 31673968 31674075 . - . Parent=GSCOCT00028294001 | |
| 17671 chr1 manual_curation exon 31674178 31674399 . - . Parent=GSCOCT00028294001 | |
| 17672 chr1 manual_curation exon 31674714 31675943 . - . Parent=GSCOCT00028294001 | |
| 17673 chr1 manual_curation CDS 31671866 31672105 . - 0 Parent=GSCOCT00028294001 | |
| 17674 chr1 manual_curation CDS 31672292 31672546 . - 0 Parent=GSCOCT00028294001 | |
| 17675 chr1 manual_curation CDS 31673148 31673396 . - 0 Parent=GSCOCT00028294001 | |
| 17676 chr1 manual_curation CDS 31673682 31673873 . - 0 Parent=GSCOCT00028294001 | |
| 17677 chr1 manual_curation CDS 31673968 31674075 . - 0 Parent=GSCOCT00028294001 | |
| 17678 chr1 manual_curation CDS 31674178 31674399 . - 0 Parent=GSCOCT00028294001 | |
| 17679 chr1 manual_curation CDS 31674714 31675943 . - 0 Parent=GSCOCT00028294001 | |
| 17680 chr1 manual_curation gene 31680107 31682267 . + . ID=GSCOCG00028295001;Name=Cc01_g13300 | |
| 17681 chr1 manual_curation mRNA 31680107 31682267 . + . ID=GSCOCT00028295001;Parent=GSCOCG00028295001;Name=Cc01_g13300 | |
| 17682 chr1 manual_curation polypeptide 31680404 31681966 . + . ID=GSCOCP00028295001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q3E6Q1,SwissProt:Q9SS83,SwissProt:Q9SVP7,TAIR:AT1G11290.1,TAIR:AT3G09040.1,TAIR:AT4G13650.1,TIGRFAMs:TIGR00756,TrEMBL:B9HPD9,TrEMBL:B9S3G0,TrEMBL:D7SKB4;Derives_from=GSCOCT00028295001;Name=Cc01_g13300;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Pentatricopeptide repeat-containing protein At4g13650,CC_functional_completeness:complete,CC_gene:PCMP-H42,CC_gene:PCMP-H40,CC_gene:PCMP-E88;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028295001~ Putative Pentatricopeptide repeat-containing protein At4g13650~ PCMP-H42~ complete;original_location=1492865..1494427;owner=coffea | |
| 17683 chr1 manual_curation exon 31680107 31682267 . + . Parent=GSCOCT00028295001 | |
| 17684 chr1 manual_curation CDS 31680404 31681966 . + 0 Parent=GSCOCT00028295001 | |
| 17685 chr1 manual_curation gene 31682829 31685542 . + . ID=GSCOCG00028296001;Name=Cc01_g13310 | |
| 17686 chr1 manual_curation mRNA 31682829 31685542 . + . ID=GSCOCT00028296001;Parent=GSCOCG00028296001;Name=Cc01_g13310 | |
| 17687 chr1 manual_curation polypeptide 31682864 31685167 . + . ID=GSCOCP00028296001;Dbxref=TAIR:AT3G46750.1,TrEMBL:A5AFW0,TrEMBL:B9GJ90,TrEMBL:B9HPD8;Derives_from=GSCOCT00028296001;Name=Cc01_g13310;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B Has 2631 Blast hits to 1984 proteins in 271 species,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028296001~ Putative unknown protein%3B Has 2631 Blast hits to 1984 proteins in 271 species: Archae - 6%3B Bacteria - 163%3B Metazoa - 1232%3B Fungi - 253%3B Plants - 141%3B Viruses - 8%3B Other Eukaryotes - 828 (source: NCBI BLink).~ unknown_gene~ modules;original_location=join(1495325..1495418%2C1495538..1497331%2C1497585..1497628);owner=coffea | |
| 17688 chr1 manual_curation exon 31682829 31682957 . + . Parent=GSCOCT00028296001 | |
| 17689 chr1 manual_curation exon 31683077 31684870 . + . Parent=GSCOCT00028296001 | |
| 17690 chr1 manual_curation exon 31685124 31685542 . + . Parent=GSCOCT00028296001 | |
| 17691 chr1 manual_curation CDS 31682864 31682957 . + 0 Parent=GSCOCT00028296001 | |
| 17692 chr1 manual_curation CDS 31683077 31684870 . + 1 Parent=GSCOCT00028296001 | |
| 17693 chr1 manual_curation CDS 31685124 31685167 . + 1 Parent=GSCOCT00028296001 | |
| 17694 chr1 manual_curation gene 31685749 31689885 . - . ID=GSCOCG00028297001;Name=Cc01_g13320 | |
| 17695 chr1 manual_curation mRNA 31685749 31689885 . - . ID=GSCOCT00028297001;Parent=GSCOCG00028297001;Name=Cc01_g13320 | |
| 17696 chr1 manual_curation polypeptide 31685954 31689611 . - . ID=GSCOCP00028297001;Dbxref=InterPro:IPR003663,InterPro:IPR005828,InterPro:IPR005829,InterPro:IPR016196,InterPro:IPR020846,PFAM:PF00083,PRINTS:PR00171,PROFILE:PS50850,PROSITE:PS00217,SUPERFAMILY:SSF103473,SwissProt:Q0WWW9,SwissProt:Q6AWX0,SwissProt:Q8L6Z8,TAIR:AT3G03090.1,TAIR:AT5G17010.1,TAIR:AT5G59250.1,TIGRFAMs:TIGR00879,TrEMBL:E3VWY8,TrEMBL:I1LQM5,TrEMBL:Q07A14;Derives_from=GSCOCT00028297001;Name=Cc01_g13320;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006810,GO:0016020,GO:0016021,GO:0022891,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:D-xylose-proton symporter-like 3%2C chloroplastic,CC_functional_completeness:complete,CC_gene:At5g59250,CC_gene:At5g17010,CC_gene:At3g03090;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028297001~ D-xylose-proton symporter-like 3%2C chloroplastic~ At5g59250~ complete;original_location=complement(join(1501833..1502072%2C1501579..1501667%2C1500871..1500949%2C1500694..1500753%2C1500534..1500600%2C1500331..1500455%2C1500128..1500229%2C1499670..1500047%2C1499497..1499544%2C1499344..1499406%2C1499172..1499252%2C1498993..1499091%2C1498659..1498796%2C1498415..1498549));owner=coffea | |
| 17697 chr1 manual_curation exon 31685749 31686088 . - . Parent=GSCOCT00028297001 | |
| 17698 chr1 manual_curation exon 31686198 31686335 . - . Parent=GSCOCT00028297001 | |
| 17699 chr1 manual_curation exon 31686532 31686630 . - . Parent=GSCOCT00028297001 | |
| 17700 chr1 manual_curation exon 31686711 31686791 . - . Parent=GSCOCT00028297001 | |
| 17701 chr1 manual_curation exon 31686883 31686945 . - . Parent=GSCOCT00028297001 | |
| 17702 chr1 manual_curation exon 31687036 31687083 . - . Parent=GSCOCT00028297001 | |
| 17703 chr1 manual_curation exon 31687209 31687586 . - . Parent=GSCOCT00028297001 | |
| 17704 chr1 manual_curation exon 31687667 31687768 . - . Parent=GSCOCT00028297001 | |
| 17705 chr1 manual_curation exon 31687870 31687994 . - . Parent=GSCOCT00028297001 | |
| 17706 chr1 manual_curation exon 31688073 31688139 . - . Parent=GSCOCT00028297001 | |
| 17707 chr1 manual_curation exon 31688233 31688292 . - . Parent=GSCOCT00028297001 | |
| 17708 chr1 manual_curation exon 31688410 31688488 . - . Parent=GSCOCT00028297001 | |
| 17709 chr1 manual_curation exon 31689118 31689206 . - . Parent=GSCOCT00028297001 | |
| 17710 chr1 manual_curation exon 31689372 31689885 . - . Parent=GSCOCT00028297001 | |
| 17711 chr1 manual_curation CDS 31685954 31686088 . - 0 Parent=GSCOCT00028297001 | |
| 17712 chr1 manual_curation CDS 31686198 31686335 . - 0 Parent=GSCOCT00028297001 | |
| 17713 chr1 manual_curation CDS 31686532 31686630 . - 0 Parent=GSCOCT00028297001 | |
| 17714 chr1 manual_curation CDS 31686711 31686791 . - 0 Parent=GSCOCT00028297001 | |
| 17715 chr1 manual_curation CDS 31686883 31686945 . - 0 Parent=GSCOCT00028297001 | |
| 17716 chr1 manual_curation CDS 31687036 31687083 . - 0 Parent=GSCOCT00028297001 | |
| 17717 chr1 manual_curation CDS 31687209 31687586 . - 0 Parent=GSCOCT00028297001 | |
| 17718 chr1 manual_curation CDS 31687667 31687768 . - 0 Parent=GSCOCT00028297001 | |
| 17719 chr1 manual_curation CDS 31687870 31687994 . - 1 Parent=GSCOCT00028297001 | |
| 17720 chr1 manual_curation CDS 31688073 31688139 . - 0 Parent=GSCOCT00028297001 | |
| 17721 chr1 manual_curation CDS 31688233 31688292 . - 0 Parent=GSCOCT00028297001 | |
| 17722 chr1 manual_curation CDS 31688410 31688488 . - 2 Parent=GSCOCT00028297001 | |
| 17723 chr1 manual_curation CDS 31689118 31689206 . - 0 Parent=GSCOCT00028297001 | |
| 17724 chr1 manual_curation CDS 31689372 31689611 . - 0 Parent=GSCOCT00028297001 | |
| 17725 chr1 manual_curation gene 31690096 31691925 . + . ID=GSCOCG00028298001;Name=Cc01_g13330 | |
| 17726 chr1 manual_curation mRNA 31690096 31691925 . + . ID=GSCOCT00028298001;Parent=GSCOCG00028298001;Name=Cc01_g13330 | |
| 17727 chr1 manual_curation polypeptide 31691444 31691884 . + . ID=GSCOCP00028298001;Dbxref=TrEMBL:B9RRF3;Derives_from=GSCOCT00028298001;Name=Cc01_g13330;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028298001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=1503905..1504345;owner=coffea | |
| 17728 chr1 manual_curation exon 31690096 31691925 . + . Parent=GSCOCT00028298001 | |
| 17729 chr1 manual_curation CDS 31691444 31691884 . + 0 Parent=GSCOCT00028298001 | |
| 17730 chr1 manual_curation gene 31692189 31698890 . - . ID=GSCOCG00028299001;Name=Cc01_g13340 | |
| 17731 chr1 manual_curation mRNA 31692189 31698890 . - . ID=GSCOCT00028299001;Parent=GSCOCG00028299001;Name=Cc01_g13340 | |
| 17732 chr1 manual_curation polypeptide 31692544 31698660 . - . ID=GSCOCP00028299001;Dbxref=GENE3D:G3DSA:1.10.287.100,GENE3D:G3DSA:2.30.18.10,InterPro:IPR004855,InterPro:IPR009083,InterPro:IPR009088,InterPro:IPR013028,PANTHER:PTHR12694,PFAM:PF03153,SUPERFAMILY:SSF47396,SUPERFAMILY:SSF50784,SwissProt:P52655,SwissProt:Q5RCU0,SwissProt:Q9USU9,TAIR:AT1G07470.1,TAIR:AT1G07480.1,TAIR:AT5G59230.1,TrEMBL:B9GJ87,TrEMBL:D7SKA9,TrEMBL:I1M4Z2;Derives_from=GSCOCT00028299001;Name=Cc01_g13340;Ontology_term=CC_evidence_code:ISS,GO:0003702,GO:0005672,GO:0006367,CC_EC_number:missing_EC_number,PRODUCT:Putative Transcription initiation factor IIA large subunit,CC_functional_completeness:complete,CC_gene:toa1,CC_gene:GTF2A1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028299001~ Putative Transcription initiation factor IIA large subunit~ toa1~ complete;original_location=complement(join(1510999..1511121%2C1510504..1510668%2C1510186..1510428%2C1509895..1509946%2C1509745..1509803%2C1506920..1507039%2C1506520..1506663%2C1505627..1505690%2C1505375..1505532%2C1505162..1505245%2C1505005..1505028));owner=coffea | |
| 17733 chr1 manual_curation exon 31692189 31692567 . - . Parent=GSCOCT00028299001 | |
| 17734 chr1 manual_curation exon 31692701 31692784 . - . Parent=GSCOCT00028299001 | |
| 17735 chr1 manual_curation exon 31692914 31693071 . - . Parent=GSCOCT00028299001 | |
| 17736 chr1 manual_curation exon 31693166 31693229 . - . Parent=GSCOCT00028299001 | |
| 17737 chr1 manual_curation exon 31694059 31694202 . - . Parent=GSCOCT00028299001 | |
| 17738 chr1 manual_curation exon 31694459 31694578 . - . Parent=GSCOCT00028299001 | |
| 17739 chr1 manual_curation exon 31697284 31697342 . - . Parent=GSCOCT00028299001 | |
| 17740 chr1 manual_curation exon 31697434 31697485 . - . Parent=GSCOCT00028299001 | |
| 17741 chr1 manual_curation exon 31697725 31697967 . - . Parent=GSCOCT00028299001 | |
| 17742 chr1 manual_curation exon 31698043 31698207 . - . Parent=GSCOCT00028299001 | |
| 17743 chr1 manual_curation exon 31698538 31698890 . - . Parent=GSCOCT00028299001 | |
| 17744 chr1 manual_curation CDS 31692544 31692567 . - 0 Parent=GSCOCT00028299001 | |
| 17745 chr1 manual_curation CDS 31692701 31692784 . - 0 Parent=GSCOCT00028299001 | |
| 17746 chr1 manual_curation CDS 31692914 31693071 . - 1 Parent=GSCOCT00028299001 | |
| 17747 chr1 manual_curation CDS 31693166 31693229 . - 0 Parent=GSCOCT00028299001 | |
| 17748 chr1 manual_curation CDS 31694059 31694202 . - 0 Parent=GSCOCT00028299001 | |
| 17749 chr1 manual_curation CDS 31694459 31694578 . - 0 Parent=GSCOCT00028299001 | |
| 17750 chr1 manual_curation CDS 31697284 31697342 . - 1 Parent=GSCOCT00028299001 | |
| 17751 chr1 manual_curation CDS 31697434 31697485 . - 0 Parent=GSCOCT00028299001 | |
| 17752 chr1 manual_curation CDS 31697725 31697967 . - 0 Parent=GSCOCT00028299001 | |
| 17753 chr1 manual_curation CDS 31698043 31698207 . - 0 Parent=GSCOCT00028299001 | |
| 17754 chr1 manual_curation CDS 31698538 31698660 . - 0 Parent=GSCOCT00028299001 | |
| 17755 chr1 manual_curation gene 31703545 31709335 . + . ID=GSCOCG00028300001;Name=Cc01_g13350 | |
| 17756 chr1 manual_curation mRNA 31703545 31709335 . + . ID=GSCOCT00028300001;Parent=GSCOCG00028300001;Name=Cc01_g13350 | |
| 17757 chr1 manual_curation polypeptide 31703916 31709335 . + . ID=GSCOCP00028300001;Dbxref=InterPro:IPR002483,PFAM:PF01480,PROFILE:PS51025,SMART:SM00311,SwissProt:Q52KI8,SwissProt:Q5R5Q2,SwissProt:Q5ZMJ9,TAIR:AT2G29210.1,TrEMBL:F6GUY6,TrEMBL:I1LJY4,TrEMBL:I1LQL7;Derives_from=GSCOCT00028300001;Name=Cc01_g13350;Ontology_term=CC_evidence_code:ISS,GO:0006397,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:SRRM1,CC_gene:Srrm1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028300001~ Hypothetical protein~ SRRM1~ missing_functional_completeness;original_location=join(1516377..1516397%2C1516537..1516626%2C1516952..1517074%2C1517435..1517602%2C1517697..1517783%2C1517919..1518046%2C1518660..1518704%2C1518793..1518849%2C1519020..1519838%2C1520538..1520759%2C1521203..1521726%2C1521777..1521796);owner=coffea | |
| 17758 chr1 manual_curation exon 31703545 31703936 . + . Parent=GSCOCT00028300001 | |
| 17759 chr1 manual_curation exon 31704076 31704165 . + . Parent=GSCOCT00028300001 | |
| 17760 chr1 manual_curation exon 31704491 31704613 . + . Parent=GSCOCT00028300001 | |
| 17761 chr1 manual_curation exon 31704974 31705141 . + . Parent=GSCOCT00028300001 | |
| 17762 chr1 manual_curation exon 31705236 31705322 . + . Parent=GSCOCT00028300001 | |
| 17763 chr1 manual_curation exon 31705458 31705585 . + . Parent=GSCOCT00028300001 | |
| 17764 chr1 manual_curation exon 31706199 31706243 . + . Parent=GSCOCT00028300001 | |
| 17765 chr1 manual_curation exon 31706332 31706388 . + . Parent=GSCOCT00028300001 | |
| 17766 chr1 manual_curation exon 31706559 31707377 . + . Parent=GSCOCT00028300001 | |
| 17767 chr1 manual_curation exon 31708077 31708298 . + . Parent=GSCOCT00028300001 | |
| 17768 chr1 manual_curation exon 31708742 31709265 . + . Parent=GSCOCT00028300001 | |
| 17769 chr1 manual_curation exon 31709316 31709335 . + . Parent=GSCOCT00028300001 | |
| 17770 chr1 manual_curation CDS 31703916 31703936 . + 0 Parent=GSCOCT00028300001 | |
| 17771 chr1 manual_curation CDS 31704076 31704165 . + 0 Parent=GSCOCT00028300001 | |
| 17772 chr1 manual_curation CDS 31704491 31704613 . + 0 Parent=GSCOCT00028300001 | |
| 17773 chr1 manual_curation CDS 31704974 31705141 . + 0 Parent=GSCOCT00028300001 | |
| 17774 chr1 manual_curation CDS 31705236 31705322 . + 0 Parent=GSCOCT00028300001 | |
| 17775 chr1 manual_curation CDS 31705458 31705585 . + 0 Parent=GSCOCT00028300001 | |
| 17776 chr1 manual_curation CDS 31706199 31706243 . + 2 Parent=GSCOCT00028300001 | |
| 17777 chr1 manual_curation CDS 31706332 31706388 . + 2 Parent=GSCOCT00028300001 | |
| 17778 chr1 manual_curation CDS 31706559 31707377 . + 2 Parent=GSCOCT00028300001 | |
| 17779 chr1 manual_curation CDS 31708077 31708298 . + 2 Parent=GSCOCT00028300001 | |
| 17780 chr1 manual_curation CDS 31708742 31709265 . + 2 Parent=GSCOCT00028300001 | |
| 17781 chr1 manual_curation CDS 31709316 31709335 . + 1 Parent=GSCOCT00028300001 | |
| 17782 chr1 manual_curation gene 31709411 31716787 . + . ID=GSCOCG00028301001;Name=Cc01_g13360 | |
| 17783 chr1 manual_curation mRNA 31709411 31716787 . + . ID=GSCOCT00028301001;Parent=GSCOCG00028301001;Name=Cc01_g13360 | |
| 17784 chr1 manual_curation polypeptide 31713684 31716440 . + . ID=GSCOCP00028301001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR008030,InterPro:IPR016040,PFAM:PF05368,SwissProt:Q8H0U5,SwissProt:Q8SKU2,TAIR:AT3G18890.1,TAIR:AT3G46780.1,TrEMBL:A9PFD6,TrEMBL:A9PH50,TrEMBL:B9S3E7;Derives_from=GSCOCT00028301001;Name=Cc01_g13360;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,CC_EC_number:missing_EC_number,PRODUCT:plastid transcriptionally active 16,CC_functional_completeness:complete,CC_gene:TIC62;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028301001~ plastid transcriptionally active 16~ TIC62~ complete;original_location=join(1526145..1526588%2C1526766..1527218%2C1527355..1527423%2C1527926..1527984%2C1528172..1528901);owner=coffea | |
| 17785 chr1 manual_curation exon 31709411 31709588 . + . Parent=GSCOCT00028301001 | |
| 17786 chr1 manual_curation exon 31709928 31710000 . + . Parent=GSCOCT00028301001 | |
| 17787 chr1 manual_curation exon 31710123 31710226 . + . Parent=GSCOCT00028301001 | |
| 17788 chr1 manual_curation exon 31713463 31714127 . + . Parent=GSCOCT00028301001 | |
| 17789 chr1 manual_curation exon 31714305 31714757 . + . Parent=GSCOCT00028301001 | |
| 17790 chr1 manual_curation exon 31714894 31714962 . + . Parent=GSCOCT00028301001 | |
| 17791 chr1 manual_curation exon 31715465 31715523 . + . Parent=GSCOCT00028301001 | |
| 17792 chr1 manual_curation exon 31715711 31716787 . + . Parent=GSCOCT00028301001 | |
| 17793 chr1 manual_curation CDS 31713684 31714127 . + 0 Parent=GSCOCT00028301001 | |
| 17794 chr1 manual_curation CDS 31714305 31714757 . + 0 Parent=GSCOCT00028301001 | |
| 17795 chr1 manual_curation CDS 31714894 31714962 . + 0 Parent=GSCOCT00028301001 | |
| 17796 chr1 manual_curation CDS 31715465 31715523 . + 0 Parent=GSCOCT00028301001 | |
| 17797 chr1 manual_curation CDS 31715711 31716440 . + 2 Parent=GSCOCT00028301001 | |
| 17798 chr1 manual_curation gene 31717374 31719305 . + . ID=GSCOCG00028302001;Name=Cc01_g13370 | |
| 17799 chr1 manual_curation mRNA 31717374 31719305 . + . ID=GSCOCT00028302001;Parent=GSCOCG00028302001;Name=Cc01_g13370 | |
| 17800 chr1 manual_curation polypeptide 31717374 31719305 . + . ID=GSCOCP00028302001;Dbxref=InterPro:IPR006740,PFAM:PF04646,TAIR:AT2G37730.1,TAIR:AT4G23490.1,TAIR:AT5G12460.1,TrEMBL:A5B465,TrEMBL:B9GEY9,TrEMBL:D7SKA5;Derives_from=GSCOCT00028302001;Name=Cc01_g13370;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of unknown function (DUF604),CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028302001~ Putative Protein of unknown function (DUF604)~ unknown_gene~ modules;original_location=join(1529835..1530782%2C1530942..1531478%2C1531665..1531766);owner=coffea | |
| 17801 chr1 manual_curation exon 31717374 31718321 . + . Parent=GSCOCT00028302001 | |
| 17802 chr1 manual_curation exon 31718481 31719017 . + . Parent=GSCOCT00028302001 | |
| 17803 chr1 manual_curation exon 31719204 31719305 . + . Parent=GSCOCT00028302001 | |
| 17804 chr1 manual_curation CDS 31717374 31718321 . + 0 Parent=GSCOCT00028302001 | |
| 17805 chr1 manual_curation CDS 31718481 31719017 . + 0 Parent=GSCOCT00028302001 | |
| 17806 chr1 manual_curation CDS 31719204 31719305 . + 0 Parent=GSCOCT00028302001 | |
| 17807 chr1 manual_curation gene 31721003 31723383 . + . ID=GSCOCG00028303001;Name=Cc01_g13380 | |
| 17808 chr1 manual_curation mRNA 31721003 31723383 . + . ID=GSCOCT00028303001;Parent=GSCOCG00028303001;Name=Cc01_g13380 | |
| 17809 chr1 manual_curation polypeptide 31721003 31723383 . + . ID=GSCOCP00028303001;Dbxref=InterPro:IPR006740,PFAM:PF04646,TAIR:AT2G37730.1,TAIR:AT4G23490.1,TAIR:AT5G12460.1,TrEMBL:A5B465,TrEMBL:B9GEY9,TrEMBL:D7SKA5;Derives_from=GSCOCT00028303001;Name=Cc01_g13380;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of unknown function (DUF604),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028303001~ Putative Protein of unknown function (DUF604)~ unknown_gene~ complete;original_location=join(1533464..1534342%2C1534603..1535157%2C1535743..1535844);owner=coffea | |
| 17810 chr1 manual_curation exon 31721003 31721881 . + . Parent=GSCOCT00028303001 | |
| 17811 chr1 manual_curation exon 31722142 31722696 . + . Parent=GSCOCT00028303001 | |
| 17812 chr1 manual_curation exon 31723282 31723383 . + . Parent=GSCOCT00028303001 | |
| 17813 chr1 manual_curation CDS 31721003 31721881 . + 0 Parent=GSCOCT00028303001 | |
| 17814 chr1 manual_curation CDS 31722142 31722696 . + 0 Parent=GSCOCT00028303001 | |
| 17815 chr1 manual_curation CDS 31723282 31723383 . + 0 Parent=GSCOCT00028303001 | |
| 17816 chr1 manual_curation gene 31731735 31735032 . + . ID=GSCOCG00028305001;Name=Cc01_g13390 | |
| 17817 chr1 manual_curation mRNA 31731735 31735032 . + . ID=GSCOCT00028305001;Parent=GSCOCG00028305001;Name=Cc01_g13390 | |
| 17818 chr1 manual_curation polypeptide 31732041 31734925 . + . ID=GSCOCP00028305001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR002198,InterPro:IPR002347,InterPro:IPR016040,PANTHER:PTHR19410,PFAM:PF00106,PRINTS:PR00080,PRINTS:PR00081,SwissProt:P50162,SwissProt:P50165,SwissProt:Q9ASX2,TAIR:AT2G29260.1,TAIR:AT2G29360.1,TAIR:AT5G06060.1,TrEMBL:A5AJK7,TrEMBL:D7SKA2,TrEMBL:Q9ZW12;Derives_from=GSCOCT00028305001;Name=Cc01_g13390;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,GO:0016491,GO:0055114,CC_EC_number:1.1.1.206,PRODUCT:Tropinone reductase homolog At1g07440,CC_functional_completeness:complete,CC_gene:At1g07440,CC_gene:TR1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028305001~ Tropinone reductase homolog At1g07440~ At1g07440~ complete;original_location=join(1544502..1544539%2C1544650..1544863%2C1546213..1546429%2C1546527..1546633%2C1547198..1547386);owner=coffea | |
| 17819 chr1 manual_curation exon 31731735 31732078 . + . Parent=GSCOCT00028305001 | |
| 17820 chr1 manual_curation exon 31732189 31732402 . + . Parent=GSCOCT00028305001 | |
| 17821 chr1 manual_curation exon 31733752 31733968 . + . Parent=GSCOCT00028305001 | |
| 17822 chr1 manual_curation exon 31734066 31734172 . + . Parent=GSCOCT00028305001 | |
| 17823 chr1 manual_curation exon 31734737 31735032 . + . Parent=GSCOCT00028305001 | |
| 17824 chr1 manual_curation CDS 31732041 31732078 . + 0 Parent=GSCOCT00028305001 | |
| 17825 chr1 manual_curation CDS 31732189 31732402 . + 2 Parent=GSCOCT00028305001 | |
| 17826 chr1 manual_curation CDS 31733752 31733968 . + 0 Parent=GSCOCT00028305001 | |
| 17827 chr1 manual_curation CDS 31734066 31734172 . + 1 Parent=GSCOCT00028305001 | |
| 17828 chr1 manual_curation CDS 31734737 31734925 . + 0 Parent=GSCOCT00028305001 | |
| 17829 chr1 manual_curation gene 31749349 31751523 . + . ID=GSCOCG00028306001;Name=Cc01_g13400 | |
| 17830 chr1 manual_curation mRNA 31749349 31751523 . + . ID=GSCOCT00028306001;Parent=GSCOCG00028306001;Name=Cc01_g13400 | |
| 17831 chr1 manual_curation polypeptide 31749832 31751453 . + . ID=GSCOCP00028306001;Dbxref=GENE3D:G3DSA:3.60.40.10,InterPro:IPR000222,InterPro:IPR001932,InterPro:IPR014045,InterPro:IPR015655,PANTHER:PTHR13832,PFAM:PF00481,PROSITE:PS01032,SMART:SM00331,SMART:SM00332,SUPERFAMILY:SSF81606,SwissProt:P49598,SwissProt:Q9LNW3,SwissProt:Q9ZW21,TAIR:AT1G07430.1,TAIR:AT2G29380.1,TAIR:AT3G11410.1,TrEMBL:B9HPC5,TrEMBL:D7SK82,TrEMBL:Q8RVG0;Derives_from=GSCOCT00028306001;Name=Cc01_g13400;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004722,GO:0006470,GO:0008287,CC_EC_number:3.1.3.16,PRODUCT:Protein phosphatase 2C 37,CC_functional_completeness:complete,CC_gene:At2g29380,CC_gene:AIP1,CC_gene:PP2CA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028306001~ Protein phosphatase 2C 37~ At2g29380~ complete;original_location=join(1562293..1562793%2C1562931..1563242%2C1563350..1563455%2C1563580..1563914);owner=coffea | |
| 17832 chr1 manual_curation exon 31749349 31750332 . + . Parent=GSCOCT00028306001 | |
| 17833 chr1 manual_curation exon 31750470 31750781 . + . Parent=GSCOCT00028306001 | |
| 17834 chr1 manual_curation exon 31750889 31750994 . + . Parent=GSCOCT00028306001 | |
| 17835 chr1 manual_curation exon 31751119 31751523 . + . Parent=GSCOCT00028306001 | |
| 17836 chr1 manual_curation CDS 31749832 31750332 . + 0 Parent=GSCOCT00028306001 | |
| 17837 chr1 manual_curation CDS 31750470 31750781 . + 0 Parent=GSCOCT00028306001 | |
| 17838 chr1 manual_curation CDS 31750889 31750994 . + 0 Parent=GSCOCT00028306001 | |
| 17839 chr1 manual_curation CDS 31751119 31751453 . + 1 Parent=GSCOCT00028306001 | |
| 17840 chr1 manual_curation gene 31754691 31761458 . - . ID=GSCOCG00028307001;Name=Cc01_g13410 | |
| 17841 chr1 manual_curation mRNA 31754691 31761458 . - . ID=GSCOCT00028307001;Parent=GSCOCG00028307001;Name=Cc01_g13410 | |
| 17842 chr1 manual_curation polypeptide 31754934 31761136 . - . ID=GSCOCP00028307001;Dbxref=InterPro:IPR006694,PFAM:PF04116,SwissProt:Q8L7W5,SwissProt:Q8VWZ8,SwissProt:Q9ZW22,TAIR:AT1G07420.1,TAIR:AT2G29390.1,TAIR:AT4G12110.1,TrEMBL:B9S3D6,TrEMBL:D7TLN9,TrEMBL:F6M7C4;Derives_from=GSCOCT00028307001;Name=Cc01_g13410;Ontology_term=CC_evidence_code:ISS,GO:0005506,GO:0005783,GO:0006633,GO:0016491,GO:0055114,CC_EC_number:1.14.13.72,PRODUCT:Methylsterol monooxygenase 2-2,CC_functional_completeness:complete,CC_gene:SMO2-2,CC_gene:SMO2-1,CC_gene:SMO1-1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028307001~ Methylsterol monooxygenase 2-2~ SMO2-2~ complete;original_location=complement(join(1573565..1573597%2C1571793..1571930%2C1569999..1570144%2C1569631..1569750%2C1569319..1569531%2C1569147..1569227%2C1567395..1567476));owner=coffea | |
| 17843 chr1 manual_curation exon 31754691 31755015 . - . Parent=GSCOCT00028307001 | |
| 17844 chr1 manual_curation exon 31756686 31756766 . - . Parent=GSCOCT00028307001 | |
| 17845 chr1 manual_curation exon 31756858 31757070 . - . Parent=GSCOCT00028307001 | |
| 17846 chr1 manual_curation exon 31757170 31757289 . - . Parent=GSCOCT00028307001 | |
| 17847 chr1 manual_curation exon 31757538 31757683 . - . Parent=GSCOCT00028307001 | |
| 17848 chr1 manual_curation exon 31759332 31759469 . - . Parent=GSCOCT00028307001 | |
| 17849 chr1 manual_curation exon 31761104 31761458 . - . Parent=GSCOCT00028307001 | |
| 17850 chr1 manual_curation CDS 31754934 31755015 . - 2 Parent=GSCOCT00028307001 | |
| 17851 chr1 manual_curation CDS 31756686 31756766 . - 2 Parent=GSCOCT00028307001 | |
| 17852 chr1 manual_curation CDS 31756858 31757070 . - 2 Parent=GSCOCT00028307001 | |
| 17853 chr1 manual_curation CDS 31757170 31757289 . - 2 Parent=GSCOCT00028307001 | |
| 17854 chr1 manual_curation CDS 31757538 31757683 . - 0 Parent=GSCOCT00028307001 | |
| 17855 chr1 manual_curation CDS 31759332 31759469 . - 0 Parent=GSCOCT00028307001 | |
| 17856 chr1 manual_curation CDS 31761104 31761136 . - 0 Parent=GSCOCT00028307001 | |
| 17857 chr1 manual_curation gene 31764784 31767187 . - . ID=GSCOCG00028308001;Name=Cc01_g13420 | |
| 17858 chr1 manual_curation mRNA 31764784 31767187 . - . ID=GSCOCT00028308001;Parent=GSCOCG00028308001;Name=Cc01_g13420 | |
| 17859 chr1 manual_curation polypeptide 31765283 31767057 . - . ID=GSCOCP00028308001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR012677,InterPro:IPR017334,PFAM:PF00076,PIR:PIRSF037949,PROFILE:PS50102,SMART:SM00360,SwissProt:A7SKE9,SwissProt:Q28CY2,SwissProt:Q641B2,TAIR:AT3G11400.2,TAIR:AT5G06000.1,TrEMBL:A9P7U1,TrEMBL:B9HT66,TrEMBL:F6GUX9;Derives_from=GSCOCT00028308001;Name=Cc01_g13420;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,CC_EC_number:missing_EC_number,PRODUCT:Putative Eukaryotic translation initiation factor 3 subunit G,CC_functional_completeness:complete,CC_gene:eif3g,CC_gene:eif3g-b,CC_gene:v1g171563;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028308001~ Putative Eukaryotic translation initiation factor 3 subunit G~ eif3g~ complete;original_location=complement(join(1579176..1579518%2C1577744..1578273));owner=coffea | |
| 17860 chr1 manual_curation exon 31764784 31765812 . - . Parent=GSCOCT00028308001 | |
| 17861 chr1 manual_curation exon 31766715 31767187 . - . Parent=GSCOCT00028308001 | |
| 17862 chr1 manual_curation CDS 31765283 31765812 . - 1 Parent=GSCOCT00028308001 | |
| 17863 chr1 manual_curation CDS 31766715 31767057 . - 0 Parent=GSCOCT00028308001 | |
| 17864 chr1 manual_curation gene 31770776 31775433 . + . ID=GSCOCG00028310001;Name=Cc01_g13430 | |
| 17865 chr1 manual_curation mRNA 31770776 31775433 . + . ID=GSCOCT00028310001;Parent=GSCOCG00028310001;Name=Cc01_g13430 | |
| 17866 chr1 manual_curation polypeptide 31771014 31774920 . + . ID=GSCOCP00028310001;Dbxref=TAIR:AT5G59210.1,TrEMBL:B9GJ76,TrEMBL:B9S3D3,TrEMBL:D7SK79;Derives_from=GSCOCT00028310001;Name=Cc01_g13430;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:myosin heavy chain-related,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028310001~ myosin heavy chain-related~ unknown_gene~ complete;original_location=join(1583475..1583510%2C1583646..1583739%2C1583893..1583939%2C1584147..1584236%2C1584402..1584455%2C1584572..1584649%2C1584755..1584823%2C1584900..1585055%2C1585253..1585379%2C1585759..1585799%2C1586076..1586165%2C1586276..1586380%2C1586516..1586689%2C1587100..1587209%2C1587306..1587381);owner=coffea | |
| 17867 chr1 manual_curation exon 31770776 31771049 . + . Parent=GSCOCT00028310001 | |
| 17868 chr1 manual_curation exon 31771185 31771278 . + . Parent=GSCOCT00028310001 | |
| 17869 chr1 manual_curation exon 31771432 31771478 . + . Parent=GSCOCT00028310001 | |
| 17870 chr1 manual_curation exon 31771686 31771775 . + . Parent=GSCOCT00028310001 | |
| 17871 chr1 manual_curation exon 31771941 31771994 . + . Parent=GSCOCT00028310001 | |
| 17872 chr1 manual_curation exon 31772111 31772188 . + . Parent=GSCOCT00028310001 | |
| 17873 chr1 manual_curation exon 31772294 31772362 . + . Parent=GSCOCT00028310001 | |
| 17874 chr1 manual_curation exon 31772439 31772594 . + . Parent=GSCOCT00028310001 | |
| 17875 chr1 manual_curation exon 31772792 31772918 . + . Parent=GSCOCT00028310001 | |
| 17876 chr1 manual_curation exon 31773298 31773338 . + . Parent=GSCOCT00028310001 | |
| 17877 chr1 manual_curation exon 31773615 31773704 . + . Parent=GSCOCT00028310001 | |
| 17878 chr1 manual_curation exon 31773815 31773919 . + . Parent=GSCOCT00028310001 | |
| 17879 chr1 manual_curation exon 31774055 31774228 . + . Parent=GSCOCT00028310001 | |
| 17880 chr1 manual_curation exon 31774639 31774748 . + . Parent=GSCOCT00028310001 | |
| 17881 chr1 manual_curation exon 31774845 31775433 . + . Parent=GSCOCT00028310001 | |
| 17882 chr1 manual_curation CDS 31771014 31771049 . + 0 Parent=GSCOCT00028310001 | |
| 17883 chr1 manual_curation CDS 31771185 31771278 . + 0 Parent=GSCOCT00028310001 | |
| 17884 chr1 manual_curation CDS 31771432 31771478 . + 1 Parent=GSCOCT00028310001 | |
| 17885 chr1 manual_curation CDS 31771686 31771775 . + 0 Parent=GSCOCT00028310001 | |
| 17886 chr1 manual_curation CDS 31771941 31771994 . + 0 Parent=GSCOCT00028310001 | |
| 17887 chr1 manual_curation CDS 31772111 31772188 . + 0 Parent=GSCOCT00028310001 | |
| 17888 chr1 manual_curation CDS 31772294 31772362 . + 0 Parent=GSCOCT00028310001 | |
| 17889 chr1 manual_curation CDS 31772439 31772594 . + 0 Parent=GSCOCT00028310001 | |
| 17890 chr1 manual_curation CDS 31772792 31772918 . + 0 Parent=GSCOCT00028310001 | |
| 17891 chr1 manual_curation CDS 31773298 31773338 . + 1 Parent=GSCOCT00028310001 | |
| 17892 chr1 manual_curation CDS 31773615 31773704 . + 0 Parent=GSCOCT00028310001 | |
| 17893 chr1 manual_curation CDS 31773815 31773919 . + 0 Parent=GSCOCT00028310001 | |
| 17894 chr1 manual_curation CDS 31774055 31774228 . + 0 Parent=GSCOCT00028310001 | |
| 17895 chr1 manual_curation CDS 31774639 31774748 . + 0 Parent=GSCOCT00028310001 | |
| 17896 chr1 manual_curation CDS 31774845 31774920 . + 2 Parent=GSCOCT00028310001 | |
| 17897 chr1 manual_curation gene 31775532 31777502 . - . ID=GSCOCG00028311001;Name=Cc01_g13440 | |
| 17898 chr1 manual_curation mRNA 31775532 31777502 . - . ID=GSCOCT00028311001;Parent=GSCOCG00028311001;Name=Cc01_g13440 | |
| 17899 chr1 manual_curation polypeptide 31775532 31777502 . - . ID=GSCOCP00028311001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q7Y211,SwissProt:Q9SN39,SwissProt:Q9STF3,TAIR:AT3G46790.1,TAIR:AT3G57430.1,TAIR:AT4G18750.1,TIGRFAMs:TIGR00756,TrEMBL:B9HPC2,TrEMBL:D7LN52,TrEMBL:F6GUX8;Derives_from=GSCOCT00028311001;Name=Cc01_g13440;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At3g46790%2C chloroplastic,CC_functional_completeness:complete,CC_gene:CRR2,CC_gene:PCMP-H45,CC_gene:PCMP-H81;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028311001~ Pentatricopeptide repeat-containing protein At3g46790%2C chloroplastic~ CRR2~ complete;original_location=complement(1587993..1589963);owner=coffea | |
| 17900 chr1 manual_curation exon 31775532 31777502 . - . Parent=GSCOCT00028311001 | |
| 17901 chr1 manual_curation CDS 31775532 31777502 . - 0 Parent=GSCOCT00028311001 | |
| 17902 chr1 manual_curation gene 31778448 31781244 . - . ID=GSCOCG00028312001;Name=Cc01_g13450 | |
| 17903 chr1 manual_curation mRNA 31778448 31781244 . - . ID=GSCOCT00028312001;Parent=GSCOCG00028312001;Name=Cc01_g13450 | |
| 17904 chr1 manual_curation polypeptide 31778711 31781161 . - . ID=GSCOCP00028312001;Dbxref=GENE3D:G3DSA:2.40.50.140,InterPro:IPR003029,InterPro:IPR005576,InterPro:IPR012340,PFAM:PF00575,PFAM:PF03876,SwissProt:P38421,SwissProt:P46279,SwissProt:Q7ZW41,TAIR:AT3G22900.1,TAIR:AT4G14660.1,TAIR:AT5G59180.1,TrEMBL:B9S3C9,TrEMBL:C6SWZ3,TrEMBL:Q6ATY6;Derives_from=GSCOCT00028312001;Name=Cc01_g13450;Ontology_term=CC_evidence_code:ISS,GO:0003723,GO:0003899,GO:0006350,CC_EC_number:missing_EC_number,PRODUCT:DNA-directed RNA polymerase II subunit RPB7,CC_functional_completeness:complete,CC_gene:RPB19,CC_gene:polr2g;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028312001~ DNA-directed RNA polymerase II subunit RPB7~ RPB19~ complete;original_location=complement(join(1593507..1593622%2C1593245..1593410%2C1593078..1593128%2C1592104..1592169%2C1591922..1591990%2C1591172..1591237));owner=coffea | |
| 17905 chr1 manual_curation exon 31778448 31778776 . - . Parent=GSCOCT00028312001 | |
| 17906 chr1 manual_curation exon 31779461 31779529 . - . Parent=GSCOCT00028312001 | |
| 17907 chr1 manual_curation exon 31779643 31779708 . - . Parent=GSCOCT00028312001 | |
| 17908 chr1 manual_curation exon 31780617 31780667 . - . Parent=GSCOCT00028312001 | |
| 17909 chr1 manual_curation exon 31780784 31780949 . - . Parent=GSCOCT00028312001 | |
| 17910 chr1 manual_curation exon 31781046 31781244 . - . Parent=GSCOCT00028312001 | |
| 17911 chr1 manual_curation CDS 31778711 31778776 . - 0 Parent=GSCOCT00028312001 | |
| 17912 chr1 manual_curation CDS 31779461 31779529 . - 0 Parent=GSCOCT00028312001 | |
| 17913 chr1 manual_curation CDS 31779643 31779708 . - 0 Parent=GSCOCT00028312001 | |
| 17914 chr1 manual_curation CDS 31780617 31780667 . - 0 Parent=GSCOCT00028312001 | |
| 17915 chr1 manual_curation CDS 31780784 31780949 . - 2 Parent=GSCOCT00028312001 | |
| 17916 chr1 manual_curation CDS 31781046 31781161 . - 0 Parent=GSCOCT00028312001 | |
| 17917 chr1 manual_curation gene 31787770 31793647 . - . ID=GSCOCG00028314001;Name=Cc01_g13460 | |
| 17918 chr1 manual_curation mRNA 31787770 31793647 . - . ID=GSCOCT00028314001;Parent=GSCOCG00028314001;Name=Cc01_g13460 | |
| 17919 chr1 manual_curation polypeptide 31788923 31793236 . - . ID=GSCOCP00028314001;Dbxref=InterPro:IPR004843,InterPro:IPR006186,PANTHER:PTHR11668,PFAM:PF00149,PRINTS:PR00114,PROSITE:PS00125,SMART:SM00156,SwissProt:O04856,SwissProt:O04857,SwissProt:P48482,TAIR:AT2G29400.1,TAIR:AT2G39840.1,TAIR:AT5G59160.1,TrEMBL:B9HMM8,TrEMBL:D7MR77,TrEMBL:Q9SPE2;Derives_from=GSCOCT00028314001;Name=Cc01_g13460;Ontology_term=CC_evidence_code:ISS,GO:0016787,CC_EC_number:3.1.3.16,PRODUCT:Serine/threonine-protein phosphatase PP1 isozyme 2,CC_functional_completeness:complete,CC_gene:NPP2,CC_gene:NPP1,CC_gene:TOPP2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028314001~ Serine/threonine-protein phosphatase PP1 isozyme 2~ NPP2~ complete;original_location=complement(join(1605496..1605697%2C1601656..1602215%2C1601384..1601557));owner=coffea | |
| 17920 chr1 manual_curation exon 31787770 31789096 . - . Parent=GSCOCT00028314001 | |
| 17921 chr1 manual_curation exon 31789195 31789754 . - . Parent=GSCOCT00028314001 | |
| 17922 chr1 manual_curation exon 31793035 31793647 . - . Parent=GSCOCT00028314001 | |
| 17923 chr1 manual_curation CDS 31788923 31789096 . - 0 Parent=GSCOCT00028314001 | |
| 17924 chr1 manual_curation CDS 31789195 31789754 . - 1 Parent=GSCOCT00028314001 | |
| 17925 chr1 manual_curation CDS 31793035 31793236 . - 0 Parent=GSCOCT00028314001 | |
| 17926 chr1 manual_curation gene 31797975 31799123 . + . ID=GSCOCG00028315001;Name=Cc01_g13470 | |
| 17927 chr1 manual_curation mRNA 31797975 31799123 . + . ID=GSCOCT00028315001;Parent=GSCOCG00028315001;Name=Cc01_g13470 | |
| 17928 chr1 manual_curation polypeptide 31797975 31799123 . + . ID=GSCOCP00028315001;Dbxref=InterPro:IPR002524,PANTHER:PTHR11562,PFAM:PF01545,SwissProt:Q6DBM8,SwissProt:Q9LXS1,SwissProt:Q9M271,TAIR:AT2G29410.1,TAIR:AT3G58810.1,TAIR:AT3G61940.1,TIGRFAMs:TIGR01297,TrEMBL:B9GJ74,TrEMBL:B9PDU6,TrEMBL:F6GUX6;Derives_from=GSCOCT00028315001;Name=Cc01_g13470;Ontology_term=CC_evidence_code:ISS,GO:0006812,GO:0008324,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Putative Metal tolerance protein B,CC_functional_completeness:complete,CC_gene:MTPB,CC_gene:MTPA2,CC_gene:MTPA1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028315001~ Putative Metal tolerance protein B~ MTPB~ complete;original_location=1610436..1611584;owner=coffea | |
| 17929 chr1 manual_curation exon 31797975 31799123 . + . Parent=GSCOCT00028315001 | |
| 17930 chr1 manual_curation CDS 31797975 31799123 . + 0 Parent=GSCOCT00028315001 | |
| 17931 chr1 manual_curation gene 31801249 31803688 . - . ID=GSCOCG00028316001;Name=Cc01_g13480 | |
| 17932 chr1 manual_curation mRNA 31801249 31803688 . - . ID=GSCOCT00028316001;Parent=GSCOCG00028316001;Name=Cc01_g13480 | |
| 17933 chr1 manual_curation polypeptide 31801595 31803311 . - . ID=GSCOCP00028316001;Dbxref=InterPro:IPR001806,InterPro:IPR002041,InterPro:IPR003577,InterPro:IPR003578,InterPro:IPR003579,InterPro:IPR005225,InterPro:IPR006688,InterPro:IPR013753,InterPro:IPR015595,InterPro:IPR020851,PANTHER:PTHR11708:SF213,PFAM:PF00071,PRINTS:PR00449,PROFILE:PS51419,SMART:SM00173,SMART:SM00174,SMART:SM00175,SMART:SM00176,SMART:SM00177,SwissProt:Q39434,SwissProt:Q40193,SwissProt:Q9LNW1,TAIR:AT1G07410.1,TAIR:AT3G46830.1,TAIR:AT5G59150.1,TIGRFAMs:TIGR00231,TrEMBL:B9HBS5,TrEMBL:I1LJX8,TrEMBL:I1LQK7;Derives_from=GSCOCT00028316001;Name=Cc01_g13480;Ontology_term=CC_evidence_code:ISS,GO:0003924,GO:0005515,GO:0005525,GO:0005622,GO:0006886,GO:0006913,GO:0007165,GO:0007264,GO:0015031,CC_EC_number:missing_EC_number,PRODUCT:Ras-related protein Rab11C,CC_functional_completeness:complete,CC_gene:RAB11C,CC_gene:RAB2BV,CC_gene:RABA2B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028316001~ Ras-related protein Rab11C~ RAB11C~ complete;original_location=complement(join(1615608..1615772%2C1614056..1614541));owner=coffea | |
| 17934 chr1 manual_curation exon 31803503 31803688 . - . Parent=GSCOCT00028316001 | |
| 17935 chr1 manual_curation exon 31801249 31802080 . - . Parent=GSCOCT00028316001 | |
| 17936 chr1 manual_curation exon 31803147 31803390 . - . Parent=GSCOCT00028316001 | |
| 17937 chr1 manual_curation CDS 31801595 31802080 . - 0 Parent=GSCOCT00028316001 | |
| 17938 chr1 manual_curation CDS 31803147 31803311 . - 0 Parent=GSCOCT00028316001 | |
| 17939 chr1 manual_curation gene 31810169 31810805 . + . ID=GSCOCG00028317001;Name=Cc01_g13490 | |
| 17940 chr1 manual_curation mRNA 31810169 31810805 . + . ID=GSCOCT00028317001;Parent=GSCOCG00028317001;Name=Cc01_g13490 | |
| 17941 chr1 manual_curation polypeptide 31810169 31810805 . + . ID=GSCOCP00028317001;Dbxref=InterPro:IPR009489,PFAM:PF06521,TAIR:AT3G54040.1,TAIR:AT5G52390.1,TrEMBL:C6T7S3,TrEMBL:I1J746,TrEMBL:I1J747;Derives_from=GSCOCT00028317001;Name=Cc01_g13490;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:PAR1 protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028317001~ PAR1 protein~ unknown_gene~ complete;original_location=join(1622630..1622915%2C1623064..1623266);owner=coffea | |
| 17942 chr1 manual_curation exon 31810169 31810454 . + . Parent=GSCOCT00028317001 | |
| 17943 chr1 manual_curation exon 31810603 31810805 . + . Parent=GSCOCT00028317001 | |
| 17944 chr1 manual_curation CDS 31810169 31810454 . + 0 Parent=GSCOCT00028317001 | |
| 17945 chr1 manual_curation CDS 31810603 31810805 . + 1 Parent=GSCOCT00028317001 | |
| 17946 chr1 manual_curation gene 31812539 31820971 . + . ID=GSCOCG00028318001;Name=Cc01_g13500 | |
| 17947 chr1 manual_curation mRNA 31812539 31820971 . + . ID=GSCOCT00028318001;Parent=GSCOCG00028318001;Name=Cc01_g13500 | |
| 17948 chr1 manual_curation polypeptide 31812805 31820719 . + . ID=GSCOCP00028318001;Dbxref=InterPro:IPR009489,PFAM:PF06521,TAIR:AT3G54040.1,TAIR:AT5G52390.1,TrEMBL:D7THD8,TrEMBL:G7JR81,TrEMBL:Q9LCZ9;Derives_from=GSCOCT00028318001;Name=Cc01_g13500;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:PAR1 protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028318001~ PAR1 protein~ unknown_gene~ complete;original_location=join(1625266..1625320%2C1625499..1625816%2C1632338..1632655%2C1632822..1633180);owner=coffea | |
| 17949 chr1 manual_curation exon 31812539 31812859 . + . Parent=GSCOCT00028318001 | |
| 17950 chr1 manual_curation exon 31813038 31813355 . + . Parent=GSCOCT00028318001 | |
| 17951 chr1 manual_curation exon 31819877 31820194 . + . Parent=GSCOCT00028318001 | |
| 17952 chr1 manual_curation exon 31820361 31820971 . + . Parent=GSCOCT00028318001 | |
| 17953 chr1 manual_curation CDS 31812805 31812859 . + 0 Parent=GSCOCT00028318001 | |
| 17954 chr1 manual_curation CDS 31813038 31813355 . + 1 Parent=GSCOCT00028318001 | |
| 17955 chr1 manual_curation CDS 31819877 31820194 . + 1 Parent=GSCOCT00028318001 | |
| 17956 chr1 manual_curation CDS 31820361 31820719 . + 1 Parent=GSCOCT00028318001 | |
| 17957 chr1 manual_curation gene 31822042 31826279 . + . ID=GSCOCG00028319001;Name=Cc01_g13510 | |
| 17958 chr1 manual_curation mRNA 31822042 31826279 . + . ID=GSCOCT00028319001;Parent=GSCOCG00028319001;Name=Cc01_g13510 | |
| 17959 chr1 manual_curation polypeptide 31822216 31825530 . + . ID=GSCOCP00028319001;Dbxref=GENE3D:G3DSA:3.30.710.10,InterPro:IPR001232,InterPro:IPR011333,InterPro:IPR016073,PFAM:PF03931,SMART:SM00512,SUPERFAMILY:SSF54695,SwissProt:P83940,SwissProt:P83941,SwissProt:Q15369,TAIR:AT5G59140.1,TrEMBL:B9HPC0,TrEMBL:B9S3C4,TrEMBL:F6GUX4;Derives_from=GSCOCT00028319001;Name=Cc01_g13510;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0006511,CC_EC_number:missing_EC_number,PRODUCT:Putative Transcription elongation factor B polypeptide 1,CC_functional_completeness:complete,CC_gene:Tceb1,CC_gene:TCEB1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028319001~ Putative Transcription elongation factor B polypeptide 1~ Tceb1~ complete;original_location=join(1634677..1634788%2C1635046..1635151%2C1637913..1637991);owner=coffea | |
| 17960 chr1 manual_curation exon 31822042 31822327 . + . Parent=GSCOCT00028319001 | |
| 17961 chr1 manual_curation exon 31822585 31822690 . + . Parent=GSCOCT00028319001 | |
| 17962 chr1 manual_curation exon 31825452 31826279 . + . Parent=GSCOCT00028319001 | |
| 17963 chr1 manual_curation CDS 31822216 31822327 . + 0 Parent=GSCOCT00028319001 | |
| 17964 chr1 manual_curation CDS 31822585 31822690 . + 1 Parent=GSCOCT00028319001 | |
| 17965 chr1 manual_curation CDS 31825452 31825530 . + 2 Parent=GSCOCT00028319001 | |
| 17966 chr1 manual_curation gene 31828674 31832939 . + . ID=GSCOCG00028320001;Name=Cc01_g13520 | |
| 17967 chr1 manual_curation mRNA 31828674 31832939 . + . ID=GSCOCT00028320001;Parent=GSCOCG00028320001;Name=Cc01_g13520 | |
| 17968 chr1 manual_curation polypeptide 31828789 31830805 . + . ID=GSCOCP00028320001;Dbxref=TAIR:AT3G55646.1,TAIR:AT5G02020.1,TAIR:AT5G59080.1,TrEMBL:B9HPB5,TrEMBL:B9S3B6,TrEMBL:D7SK66;Derives_from=GSCOCT00028320001;Name=Cc01_g13520;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Encodes a protein involved in salt tolerance%2C names SIS (Salt Induced Serine rich).,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028320001~ Putative Encodes a protein involved in salt tolerance%2C names SIS (Salt Induced Serine rich).~ unknown_gene~ complete;original_location=join(1641250..1641396%2C1641969..1642059%2C1642825..1643000%2C1643084..1643168%2C1643250..1643266);owner=coffea | |
| 17969 chr1 manual_curation exon 31832609 31832939 . + . Parent=GSCOCT00028320001 | |
| 17970 chr1 manual_curation exon 31828674 31828935 . + . Parent=GSCOCT00028320001 | |
| 17971 chr1 manual_curation exon 31829508 31829598 . + . Parent=GSCOCT00028320001 | |
| 17972 chr1 manual_curation exon 31830364 31830539 . + . Parent=GSCOCT00028320001 | |
| 17973 chr1 manual_curation exon 31830623 31830707 . + . Parent=GSCOCT00028320001 | |
| 17974 chr1 manual_curation exon 31830789 31830856 . + . Parent=GSCOCT00028320001 | |
| 17975 chr1 manual_curation CDS 31828789 31828935 . + 0 Parent=GSCOCT00028320001 | |
| 17976 chr1 manual_curation CDS 31829508 31829598 . + 0 Parent=GSCOCT00028320001 | |
| 17977 chr1 manual_curation CDS 31830364 31830539 . + 1 Parent=GSCOCT00028320001 | |
| 17978 chr1 manual_curation CDS 31830623 31830707 . + 0 Parent=GSCOCT00028320001 | |
| 17979 chr1 manual_curation CDS 31830789 31830805 . + 1 Parent=GSCOCT00028320001 | |
| 17980 chr1 manual_curation gene 31834033 31836904 . - . ID=GSCOCG00028321001;Name=Cc01_g13530 | |
| 17981 chr1 manual_curation mRNA 31834033 31836904 . - . ID=GSCOCT00028321001;Parent=GSCOCG00028321001;Name=Cc01_g13530 | |
| 17982 chr1 manual_curation polypeptide 31834033 31836904 . - . ID=GSCOCP00028321001;Dbxref=InterPro:IPR001296,PFAM:PF00534,TAIR:AT1G73160.1,TAIR:AT4G19460.1,TAIR:AT5G59070.1,TrEMBL:A5AVK8,TrEMBL:B9S3B5,TrEMBL:F6GUW9;Derives_from=GSCOCT00028321001;Name=Cc01_g13530;Ontology_term=CC_evidence_code:ISS,GO:0009058,CC_EC_number:missing_EC_number,PRODUCT:UDP-Glycosyltransferase superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028321001~ UDP-Glycosyltransferase superfamily protein~ unknown_gene~ complete;original_location=complement(join(1649074..1649365%2C1648552..1648564%2C1646494..1647943));owner=coffea | |
| 17983 chr1 manual_curation exon 31834033 31835482 . - . Parent=GSCOCT00028321001 | |
| 17984 chr1 manual_curation exon 31836091 31836103 . - . Parent=GSCOCT00028321001 | |
| 17985 chr1 manual_curation exon 31836613 31836904 . - . Parent=GSCOCT00028321001 | |
| 17986 chr1 manual_curation CDS 31834033 31835482 . - 2 Parent=GSCOCT00028321001 | |
| 17987 chr1 manual_curation CDS 31836091 31836103 . - 1 Parent=GSCOCT00028321001 | |
| 17988 chr1 manual_curation CDS 31836613 31836904 . - 0 Parent=GSCOCT00028321001 | |
| 17989 chr1 manual_curation gene 31841755 31845831 . + . ID=GSCOCG00028322001;Name=Cc01_g13540 | |
| 17990 chr1 manual_curation mRNA 31841755 31845831 . + . ID=GSCOCT00028322001;Parent=GSCOCG00028322001;Name=Cc01_g13540 | |
| 17991 chr1 manual_curation polypeptide 31842134 31845168 . + . ID=GSCOCP00028322001;Dbxref=TAIR:AT3G54000.1,TAIR:AT5G59050.1,TrEMBL:B9HPB2,TrEMBL:B9S3A1,TrEMBL:D7SK61;Derives_from=GSCOCT00028322001;Name=Cc01_g13540;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028322001~ Putative unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G54000.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(1654595..1655002%2C1655100..1655297%2C1655425..1655743%2C1657126..1657251%2C1657490..1657629);owner=coffea | |
| 17992 chr1 manual_curation exon 31841755 31842541 . + . Parent=GSCOCT00028322001 | |
| 17993 chr1 manual_curation exon 31842639 31842836 . + . Parent=GSCOCT00028322001 | |
| 17994 chr1 manual_curation exon 31842964 31843282 . + . Parent=GSCOCT00028322001 | |
| 17995 chr1 manual_curation exon 31844665 31844790 . + . Parent=GSCOCT00028322001 | |
| 17996 chr1 manual_curation exon 31845029 31845831 . + . Parent=GSCOCT00028322001 | |
| 17997 chr1 manual_curation CDS 31842134 31842541 . + 0 Parent=GSCOCT00028322001 | |
| 17998 chr1 manual_curation CDS 31842639 31842836 . + 0 Parent=GSCOCT00028322001 | |
| 17999 chr1 manual_curation CDS 31842964 31843282 . + 0 Parent=GSCOCT00028322001 | |
| 18000 chr1 manual_curation CDS 31844665 31844790 . + 1 Parent=GSCOCT00028322001 | |
| 18001 chr1 manual_curation CDS 31845029 31845168 . + 1 Parent=GSCOCT00028322001 | |
| 18002 chr1 manual_curation gene 31850420 31850997 . - . ID=GSCOCG00028324001;Name=Cc01_g13550 | |
| 18003 chr1 manual_curation mRNA 31850420 31850997 . - . ID=GSCOCT00028324001;Parent=GSCOCG00028324001;Name=Cc01_g13550 | |
| 18004 chr1 manual_curation polypeptide 31850473 31850874 . - . ID=GSCOCP00028324001;Dbxref=InterPro:IPR007274,PANTHER:PTHR12483,PFAM:PF04145,SwissProt:Q39065,SwissProt:Q8GWP3,SwissProt:Q9STG2,TAIR:AT2G26975.1,TAIR:AT3G46900.1,TAIR:AT5G59030.1,TrEMBL:A9PEN3,TrEMBL:B9HPB1,TrEMBL:E9LK44;Derives_from=GSCOCT00028324001;Name=Cc01_g13550;Ontology_term=CC_evidence_code:ISS,GO:0005375,GO:0006825,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Copper transporter 1,CC_functional_completeness:fragment,CC_gene:COPT1,CC_gene:COPT6,CC_gene:COPT2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028324001~ Copper transporter 1~ COPT1~ fragment;original_location=complement(1662934..1663335);owner=coffea | |
| 18005 chr1 manual_curation exon 31850420 31850997 . - . Parent=GSCOCT00028324001 | |
| 18006 chr1 manual_curation CDS 31850473 31850874 . - 0 Parent=GSCOCT00028324001 | |
| 18007 chr1 manual_curation gene 31853767 31854129 . - . ID=GSCOCG00028326001;Name=Cc01_g13560 | |
| 18008 chr1 manual_curation mRNA 31853767 31854129 . - . ID=GSCOCT00028326001;Parent=GSCOCG00028326001;Name=Cc01_g13560 | |
| 18009 chr1 manual_curation polypeptide 31853767 31854129 . - . ID=GSCOCP00028326001;Dbxref=InterPro:IPR007274,PANTHER:PTHR12483,PFAM:PF04145,SwissProt:Q39065,SwissProt:Q8GWP3,SwissProt:Q9STG2,TAIR:AT2G26975.1,TAIR:AT3G46900.1,TAIR:AT5G59030.1,TrEMBL:B9HPB1,TrEMBL:B9S399,TrEMBL:E9LK44;Derives_from=GSCOCT00028326001;Name=Cc01_g13560;Ontology_term=CC_evidence_code:ISS,GO:0005375,GO:0006825,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Putative Copper transporter 6,CC_functional_completeness:fragment,CC_gene:COPT6,CC_gene:COPT1,CC_gene:COPT2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028326001~ Putative Copper transporter 6~ COPT6~ fragment;original_location=complement(1666228..1666590);owner=coffea | |
| 18010 chr1 manual_curation exon 31853767 31854129 . - . Parent=GSCOCT00028326001 | |
| 18011 chr1 manual_curation CDS 31853767 31854129 . - 0 Parent=GSCOCT00028326001 | |
| 18012 chr1 manual_curation gene 31855782 31858798 . + . ID=GSCOCG00028327001;Name=Cc01_g13570 | |
| 18013 chr1 manual_curation mRNA 31855782 31858798 . + . ID=GSCOCT00028327001;Parent=GSCOCG00028327001;Name=Cc01_g13570 | |
| 18014 chr1 manual_curation polypeptide 31856668 31858265 . + . ID=GSCOCP00028327001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,PROSITE:PS00375,SwissProt:Q9FI98,SwissProt:Q9LTH2,SwissProt:Q9LTH3,TAIR:AT3G11340.1,TAIR:AT5G05880.1,TAIR:AT5G59590.1,TrEMBL:A5BH14,TrEMBL:A9PGJ3,TrEMBL:B9S398;Derives_from=GSCOCT00028327001;Name=Cc01_g13570;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:Putative UDP-glycosyltransferase 76C4,CC_functional_completeness:complete,CC_gene:UGT76C4,CC_gene:UGT76E2,CC_gene:UGT76E1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028327001~ Putative UDP-glycosyltransferase 76C4~ UGT76C4~ complete;original_location=join(1669129..1669612%2C1669840..1670726);owner=coffea | |
| 18015 chr1 manual_curation exon 31855782 31857151 . + . Parent=GSCOCT00028327001 | |
| 18016 chr1 manual_curation exon 31857379 31858798 . + . Parent=GSCOCT00028327001 | |
| 18017 chr1 manual_curation CDS 31856668 31857151 . + 0 Parent=GSCOCT00028327001 | |
| 18018 chr1 manual_curation CDS 31857379 31858265 . + 1 Parent=GSCOCT00028327001 | |
| 18019 chr1 manual_curation gene 31858894 31859355 . - . ID=GSCOCG00028328001;Name=Cc01_g13580 | |
| 18020 chr1 manual_curation mRNA 31858894 31859355 . - . ID=GSCOCT00028328001;Parent=GSCOCG00028328001;Name=Cc01_g13580 | |
| 18021 chr1 manual_curation polypeptide 31858894 31859355 . - . ID=GSCOCP00028328001;Dbxref=InterPro:IPR002068,InterPro:IPR008978,PFAM:PF00011,PROFILE:PS01031,SUPERFAMILY:SSF49764,SwissProt:P02519,SwissProt:P04793,SwissProt:P27880,TAIR:AT1G07400.1,TAIR:AT1G53540.1,TAIR:AT2G29500.1,TrEMBL:C6T5U3,TrEMBL:E2ESP4,TrEMBL:Q2HTU2;Derives_from=GSCOCT00028328001;Name=Cc01_g13580;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:17.5 kDa class I heat shock protein,CC_functional_completeness:complete,CC_gene:HSP17.5-M,CC_gene:HSP17.3-B,CC_gene:HSP18.2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028328001~ 17.5 kDa class I heat shock protein~ HSP17.5-M~ complete;original_location=complement(1671355..1671816);owner=coffea | |
| 18022 chr1 manual_curation exon 31858894 31859355 . - . Parent=GSCOCT00028328001 | |
| 18023 chr1 manual_curation CDS 31858894 31859355 . - 0 Parent=GSCOCT00028328001 | |
| 18024 chr1 manual_curation gene 31868790 31874412 . + . ID=GSCOCG00028331001;Name=Cc01_g13590 | |
| 18025 chr1 manual_curation mRNA 31868790 31874412 . + . ID=GSCOCT00028331001;Parent=GSCOCG00028331001;Name=Cc01_g13590 | |
| 18026 chr1 manual_curation polypeptide 31869738 31873928 . + . ID=GSCOCP00028331001;Dbxref=InterPro:IPR021916,PFAM:PF12043,TAIR:AT2G29510.1,TAIR:AT5G01030.1,TAIR:AT5G59020.1,TrEMBL:A5BH13,TrEMBL:B9HPA5,TrEMBL:F6GUV9;Derives_from=GSCOCT00028331001;Name=Cc01_g13590;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of unknown function (DUF3527),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028331001~ Putative Protein of unknown function (DUF3527)~ unknown_gene~ complete;original_location=join(1682199..1682312%2C1683386..1685956%2C1686093..1686389);owner=coffea | |
| 18027 chr1 manual_curation exon 31868790 31869851 . + . Parent=GSCOCT00028331001 | |
| 18028 chr1 manual_curation exon 31870925 31873495 . + . Parent=GSCOCT00028331001 | |
| 18029 chr1 manual_curation exon 31873632 31874412 . + . Parent=GSCOCT00028331001 | |
| 18030 chr1 manual_curation CDS 31869738 31869851 . + 0 Parent=GSCOCT00028331001 | |
| 18031 chr1 manual_curation CDS 31870925 31873495 . + 0 Parent=GSCOCT00028331001 | |
| 18032 chr1 manual_curation CDS 31873632 31873928 . + 0 Parent=GSCOCT00028331001 | |
| 18033 chr1 manual_curation gene 31883745 31888213 . + . ID=GSCOCG00028332001;Name=Cc01_g13600 | |
| 18034 chr1 manual_curation mRNA 31883745 31888213 . + . ID=GSCOCT00028332001;Parent=GSCOCG00028332001;Name=Cc01_g13600 | |
| 18035 chr1 manual_curation polypeptide 31884212 31887972 . + . ID=GSCOCP00028332001;Dbxref=GENE3D:G3DSA:1.25.40.10,InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR011009,InterPro:IPR011990,InterPro:IPR020635,PFAM:PF07714,PROFILE:PS50011,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q7XJT7,SwissProt:Q944A7,SwissProt:Q9FHD7,TAIR:AT1G63500.1,TAIR:AT3G54030.1,TAIR:AT5G59010.1,TrEMBL:B9S387,TrEMBL:D7SK53,TrEMBL:D7THE2;Derives_from=GSCOCT00028332001;Name=Cc01_g13600;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005488,GO:0005524,GO:0006468,CC_EC_number:2.7.10.2,PRODUCT:Probable serine/threonine-protein kinase At5g41260,CC_functional_completeness:complete,CC_gene:At5g41260,CC_gene:At4g35230,CC_gene:SSP;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028332001~ Probable serine/threonine-protein kinase At5g41260~ At5g41260~ complete;original_location=join(1696673..1696754%2C1696836..1697059%2C1697165..1697300%2C1697667..1697800%2C1697906..1698011%2C1698434..1698519%2C1698778..1698966%2C1699108..1699272%2C1700000..1700113%2C1700200..1700433);owner=coffea | |
| 18036 chr1 manual_curation exon 31883745 31884072 . + . Parent=GSCOCT00028332001 | |
| 18037 chr1 manual_curation exon 31884192 31884293 . + . Parent=GSCOCT00028332001 | |
| 18038 chr1 manual_curation exon 31884375 31884598 . + . Parent=GSCOCT00028332001 | |
| 18039 chr1 manual_curation exon 31884704 31884839 . + . Parent=GSCOCT00028332001 | |
| 18040 chr1 manual_curation exon 31885206 31885339 . + . Parent=GSCOCT00028332001 | |
| 18041 chr1 manual_curation exon 31885445 31885550 . + . Parent=GSCOCT00028332001 | |
| 18042 chr1 manual_curation exon 31885973 31886058 . + . Parent=GSCOCT00028332001 | |
| 18043 chr1 manual_curation exon 31886317 31886505 . + . Parent=GSCOCT00028332001 | |
| 18044 chr1 manual_curation exon 31886647 31886811 . + . Parent=GSCOCT00028332001 | |
| 18045 chr1 manual_curation exon 31887539 31887652 . + . Parent=GSCOCT00028332001 | |
| 18046 chr1 manual_curation exon 31887739 31888213 . + . Parent=GSCOCT00028332001 | |
| 18047 chr1 manual_curation CDS 31884212 31884293 . + 0 Parent=GSCOCT00028332001 | |
| 18048 chr1 manual_curation CDS 31884375 31884598 . + 1 Parent=GSCOCT00028332001 | |
| 18049 chr1 manual_curation CDS 31884704 31884839 . + 0 Parent=GSCOCT00028332001 | |
| 18050 chr1 manual_curation CDS 31885206 31885339 . + 1 Parent=GSCOCT00028332001 | |
| 18051 chr1 manual_curation CDS 31885445 31885550 . + 0 Parent=GSCOCT00028332001 | |
| 18052 chr1 manual_curation CDS 31885973 31886058 . + 1 Parent=GSCOCT00028332001 | |
| 18053 chr1 manual_curation CDS 31886317 31886505 . + 0 Parent=GSCOCT00028332001 | |
| 18054 chr1 manual_curation CDS 31886647 31886811 . + 0 Parent=GSCOCT00028332001 | |
| 18055 chr1 manual_curation CDS 31887539 31887652 . + 0 Parent=GSCOCT00028332001 | |
| 18056 chr1 manual_curation CDS 31887739 31887972 . + 0 Parent=GSCOCT00028332001 | |
| 18057 chr1 manual_curation gene 31889762 31891692 . - . ID=GSCOCG00028334001;Name=Cc01_g13610 | |
| 18058 chr1 manual_curation mRNA 31889762 31891692 . - . ID=GSCOCT00028334001;Parent=GSCOCG00028334001;Name=Cc01_g13610 | |
| 18059 chr1 manual_curation polypeptide 31889762 31891446 . - . ID=GSCOCP00028334001;Dbxref=InterPro:IPR004217,PFAM:PF02953,SwissProt:Q6CIK7,SwissProt:Q9UTE9,SwissProt:Q9ZW33,TAIR:AT2G29530.3,TrEMBL:C6T199,TrEMBL:D7SK52,TrEMBL:I1M502;Derives_from=GSCOCT00028334001;Name=Cc01_g13610;Ontology_term=CC_evidence_code:ISS,GO:0006626,GO:0042719,GO:0045039,CC_EC_number:missing_EC_number,PRODUCT:Mitochondrial import inner membrane translocase subunit Tim10,CC_functional_completeness:complete,CC_gene:TIM10,CC_gene:tim10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028334001~ Mitochondrial import inner membrane translocase subunit Tim10~ TIM10~ complete;original_location=complement(join(1703851..1703907%2C1703575..1703627%2C1702905..1702943%2C1702694..1702763%2C1702223..1702273));owner=coffea | |
| 18060 chr1 manual_curation exon 31891584 31891692 . - . Parent=GSCOCT00028334001 | |
| 18061 chr1 manual_curation exon 31889762 31889812 . - . Parent=GSCOCT00028334001 | |
| 18062 chr1 manual_curation exon 31890233 31890302 . - . Parent=GSCOCT00028334001 | |
| 18063 chr1 manual_curation exon 31890444 31890482 . - . Parent=GSCOCT00028334001 | |
| 18064 chr1 manual_curation exon 31891114 31891166 . - . Parent=GSCOCT00028334001 | |
| 18065 chr1 manual_curation exon 31891390 31891459 . - . Parent=GSCOCT00028334001 | |
| 18066 chr1 manual_curation CDS 31889762 31889812 . - 0 Parent=GSCOCT00028334001 | |
| 18067 chr1 manual_curation CDS 31890233 31890302 . - 2 Parent=GSCOCT00028334001 | |
| 18068 chr1 manual_curation CDS 31890444 31890482 . - 2 Parent=GSCOCT00028334001 | |
| 18069 chr1 manual_curation CDS 31891114 31891166 . - 0 Parent=GSCOCT00028334001 | |
| 18070 chr1 manual_curation CDS 31891390 31891446 . - 0 Parent=GSCOCT00028334001 | |
| 18071 chr1 manual_curation gene 31892075 31896039 . - . ID=GSCOCG00028335001;Name=Cc01_g13620 | |
| 18072 chr1 manual_curation mRNA 31892075 31896039 . - . ID=GSCOCT00028335001;Parent=GSCOCG00028335001;Name=Cc01_g13620 | |
| 18073 chr1 manual_curation polypeptide 31892358 31895622 . - . ID=GSCOCP00028335001;Dbxref=InterPro:IPR011016,InterPro:IPR018957,PFAM:PF00097,PROFILE:PS51292,SMART:SM00744,TAIR:AT5G01070.2,TAIR:AT5G05830.1,TAIR:AT5G59000.1,TrEMBL:A9PAJ2,TrEMBL:A9PE12,TrEMBL:D7SK49;Derives_from=GSCOCT00028335001;Name=Cc01_g13620;Ontology_term=CC_evidence_code:ISS,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028335001~ Putative uncharacterized protein~ unknown_gene~ modules;original_location=complement(join(1707524..1708083%2C1704819..1705041));owner=coffea | |
| 18074 chr1 manual_curation exon 31892075 31892580 . - . Parent=GSCOCT00028335001 | |
| 18075 chr1 manual_curation exon 31895063 31896039 . - . Parent=GSCOCT00028335001 | |
| 18076 chr1 manual_curation CDS 31892358 31892580 . - 2 Parent=GSCOCT00028335001 | |
| 18077 chr1 manual_curation CDS 31895063 31895622 . - 0 Parent=GSCOCT00028335001 | |
| 18078 chr1 manual_curation gene 31898144 31904484 . - . ID=GSCOCG00028337001;Name=Cc01_g13630 | |
| 18079 chr1 manual_curation mRNA 31898144 31904484 . - . ID=GSCOCT00028337001;Parent=GSCOCG00028337001;Name=Cc01_g13630 | |
| 18080 chr1 manual_curation polypeptide 31898868 31904199 . - . ID=GSCOCP00028337001;Dbxref=SwissProt:Q58FY4,SwissProt:Q6DBN5,TAIR:AT3G12940.1,TAIR:AT3G19895.1,TAIR:AT5G05230.1,TrEMBL:B9HI63,TrEMBL:B9HY26,TrEMBL:F6HGH8;Derives_from=GSCOCT00028337001;Name=Cc01_g13630;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:RING/U-box superfamily protein,CC_functional_completeness:complete,CC_gene:PUB62,CC_gene:PUB63;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028337001~ RING/U-box superfamily protein~ PUB62~ complete;original_location=complement(join(1716444..1716660%2C1716092..1716377%2C1715537..1715653%2C1715252..1715444%2C1714902..1715068%2C1714633..1714807%2C1714178..1714239%2C1713436..1713517%2C1713087..1713144%2C1712825..1712925%2C1712479..1712562%2C1712317..1712387%2C1711329..1711458));owner=coffea | |
| 18081 chr1 manual_curation exon 31898144 31898997 . - . Parent=GSCOCT00028337001 | |
| 18082 chr1 manual_curation exon 31899856 31899926 . - . Parent=GSCOCT00028337001 | |
| 18083 chr1 manual_curation exon 31900018 31900101 . - . Parent=GSCOCT00028337001 | |
| 18084 chr1 manual_curation exon 31900364 31900464 . - . Parent=GSCOCT00028337001 | |
| 18085 chr1 manual_curation exon 31900626 31900683 . - . Parent=GSCOCT00028337001 | |
| 18086 chr1 manual_curation exon 31900975 31901056 . - . Parent=GSCOCT00028337001 | |
| 18087 chr1 manual_curation exon 31901717 31901778 . - . Parent=GSCOCT00028337001 | |
| 18088 chr1 manual_curation exon 31902172 31902346 . - . Parent=GSCOCT00028337001 | |
| 18089 chr1 manual_curation exon 31902441 31902607 . - . Parent=GSCOCT00028337001 | |
| 18090 chr1 manual_curation exon 31902791 31902983 . - . Parent=GSCOCT00028337001 | |
| 18091 chr1 manual_curation exon 31903076 31903192 . - . Parent=GSCOCT00028337001 | |
| 18092 chr1 manual_curation exon 31903631 31903916 . - . Parent=GSCOCT00028337001 | |
| 18093 chr1 manual_curation exon 31903983 31904484 . - . Parent=GSCOCT00028337001 | |
| 18094 chr1 manual_curation CDS 31898868 31898997 . - 2 Parent=GSCOCT00028337001 | |
| 18095 chr1 manual_curation CDS 31899856 31899926 . - 0 Parent=GSCOCT00028337001 | |
| 18096 chr1 manual_curation CDS 31900018 31900101 . - 0 Parent=GSCOCT00028337001 | |
| 18097 chr1 manual_curation CDS 31900364 31900464 . - 1 Parent=GSCOCT00028337001 | |
| 18098 chr1 manual_curation CDS 31900626 31900683 . - 0 Parent=GSCOCT00028337001 | |
| 18099 chr1 manual_curation CDS 31900975 31901056 . - 2 Parent=GSCOCT00028337001 | |
| 18100 chr1 manual_curation CDS 31901717 31901778 . - 0 Parent=GSCOCT00028337001 | |
| 18101 chr1 manual_curation CDS 31902172 31902346 . - 2 Parent=GSCOCT00028337001 | |
| 18102 chr1 manual_curation CDS 31902441 31902607 . - 0 Parent=GSCOCT00028337001 | |
| 18103 chr1 manual_curation CDS 31902791 31902983 . - 2 Parent=GSCOCT00028337001 | |
| 18104 chr1 manual_curation CDS 31903076 31903192 . - 2 Parent=GSCOCT00028337001 | |
| 18105 chr1 manual_curation CDS 31903631 31903916 . - 1 Parent=GSCOCT00028337001 | |
| 18106 chr1 manual_curation CDS 31903983 31904199 . - 0 Parent=GSCOCT00028337001 | |
| 18107 chr1 manual_curation gene 31905663 31906429 . - . ID=GSCOCG00028338001;Name=Cc01_g13640 | |
| 18108 chr1 manual_curation mRNA 31905663 31906429 . - . ID=GSCOCT00028338001;Parent=GSCOCG00028338001;Name=Cc01_g13640 | |
| 18109 chr1 manual_curation polypeptide 31905663 31906429 . - . ID=GSCOCP00028338001;Dbxref=InterPro:IPR009489,PFAM:PF06521,TAIR:AT3G54040.1,TAIR:AT5G52390.1,TrEMBL:B9HP98,TrEMBL:B9HP99,TrEMBL:D7THD8;Derives_from=GSCOCT00028338001;Name=Cc01_g13640;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative PAR1 protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028338001~ Putative PAR1 protein~ unknown_gene~ complete;original_location=complement(join(1718839..1718890%2C1718402..1718731%2C1718124..1718308));owner=coffea | |
| 18110 chr1 manual_curation exon 31905663 31905847 . - . Parent=GSCOCT00028338001 | |
| 18111 chr1 manual_curation exon 31905941 31906270 . - . Parent=GSCOCT00028338001 | |
| 18112 chr1 manual_curation exon 31906378 31906429 . - . Parent=GSCOCT00028338001 | |
| 18113 chr1 manual_curation CDS 31905663 31905847 . - 1 Parent=GSCOCT00028338001 | |
| 18114 chr1 manual_curation CDS 31905941 31906270 . - 1 Parent=GSCOCT00028338001 | |
| 18115 chr1 manual_curation CDS 31906378 31906429 . - 0 Parent=GSCOCT00028338001 | |
| 18116 chr1 manual_curation gene 31909078 31910896 . - . ID=GSCOCG00028339001;Name=Cc01_g13650 | |
| 18117 chr1 manual_curation mRNA 31909078 31910896 . - . ID=GSCOCT00028339001;Parent=GSCOCG00028339001;Name=Cc01_g13650 | |
| 18118 chr1 manual_curation polypeptide 31909767 31910840 . - . ID=GSCOCP00028339001;Dbxref=InterPro:IPR009489,PFAM:PF06521,TAIR:AT3G54040.1,TAIR:AT5G52390.1,TrEMBL:B9HP99,TrEMBL:C6T7S3,TrEMBL:Q9FXS6;Derives_from=GSCOCT00028339001;Name=Cc01_g13650;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:PAR1 protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028339001~ PAR1 protein~ unknown_gene~ fragment;original_location=complement(join(1723247..1723301%2C1722815..1723144%2C1722228..1722379));owner=coffea | |
| 18119 chr1 manual_curation exon 31909078 31909918 . - . Parent=GSCOCT00028339001 | |
| 18120 chr1 manual_curation exon 31910354 31910683 . - . Parent=GSCOCT00028339001 | |
| 18121 chr1 manual_curation exon 31910786 31910896 . - . Parent=GSCOCT00028339001 | |
| 18122 chr1 manual_curation CDS 31909767 31909918 . - 1 Parent=GSCOCT00028339001 | |
| 18123 chr1 manual_curation CDS 31910354 31910683 . - 1 Parent=GSCOCT00028339001 | |
| 18124 chr1 manual_curation CDS 31910786 31910840 . - 0 Parent=GSCOCT00028339001 | |
| 18125 chr1 manual_curation gene 31913293 31915629 . - . ID=GSCOCG00028341001;Name=Cc01_g13660 | |
| 18126 chr1 manual_curation mRNA 31913293 31915629 . - . ID=GSCOCT00028341001;Parent=GSCOCG00028341001;Name=Cc01_g13660 | |
| 18127 chr1 manual_curation polypeptide 31913394 31915481 . - . ID=GSCOCP00028341001;Dbxref=TAIR:AT5G52370.1,TAIR:AT5G58990.1,TrEMBL:C6T0C2,TrEMBL:I1M522,TrEMBL:I1MDA0;Derives_from=GSCOCT00028341001;Name=Cc01_g13660;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028341001~ unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G58990.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(1727667..1727942%2C1727485..1727527%2C1725855..1725973));owner=coffea | |
| 18128 chr1 manual_curation exon 31913293 31913512 . - . Parent=GSCOCT00028341001 | |
| 18129 chr1 manual_curation exon 31915024 31915066 . - . Parent=GSCOCT00028341001 | |
| 18130 chr1 manual_curation exon 31915206 31915629 . - . Parent=GSCOCT00028341001 | |
| 18131 chr1 manual_curation CDS 31913394 31913512 . - 1 Parent=GSCOCT00028341001 | |
| 18132 chr1 manual_curation CDS 31915024 31915066 . - 0 Parent=GSCOCT00028341001 | |
| 18133 chr1 manual_curation CDS 31915206 31915481 . - 0 Parent=GSCOCT00028341001 | |
| 18134 chr1 manual_curation gene 31918187 31920638 . - . ID=GSCOCG00028342001;Name=Cc01_g13670 | |
| 18135 chr1 manual_curation mRNA 31918187 31920638 . - . ID=GSCOCT00028342001;Parent=GSCOCG00028342001;Name=Cc01_g13670 | |
| 18136 chr1 manual_curation polypeptide 31918490 31920469 . - . ID=GSCOCP00028342001;Dbxref=GENE3D:G3DSA:3.30.1330.20,GENE3D:G3DSA:3.40.50.1440,InterPro:IPR000217,InterPro:IPR002453,InterPro:IPR003008,InterPro:IPR008280,InterPro:IPR013838,InterPro:IPR017975,InterPro:IPR018316,PANTHER:PTHR11588,PANTHER:PTHR11588:SF9,PFAM:PF00091,PFAM:PF03953,PRINTS:PR01161,PRINTS:PR01163,PROSITE:PS00227,PROSITE:PS00228,SMART:SM00864,SMART:SM00865,SUPERFAMILY:SSF52490,SUPERFAMILY:SSF55307,SwissProt:P18025,SwissProt:P29516,SwissProt:Q9ZPN9,TAIR:AT5G23860.1,TAIR:AT5G62690.1,TAIR:AT5G62700.1,TrEMBL:B1PBV8,TrEMBL:D7M2D7,TrEMBL:Q3HRZ9;Derives_from=GSCOCT00028342001;Name=Cc01_g13670;Ontology_term=CC_evidence_code:ISS,GO:0003924,GO:0005198,GO:0005525,GO:0005874,GO:0007017,GO:0007018,GO:0043234,GO:0051258,CC_EC_number:missing_EC_number,PRODUCT:Tubulin beta-1 chain,CC_functional_completeness:complete,CC_gene:TUBB1,CC_gene:TUBB2,CC_gene:TUBB8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028342001~ Tubulin beta-1 chain~ TUBB1~ complete;original_location=complement(join(1732537..1732930%2C1732134..1732403%2C1731152..1731627%2C1730951..1731088));owner=coffea | |
| 18137 chr1 manual_curation exon 31918187 31918627 . - . Parent=GSCOCT00028342001 | |
| 18138 chr1 manual_curation exon 31918691 31919166 . - . Parent=GSCOCT00028342001 | |
| 18139 chr1 manual_curation exon 31919673 31919942 . - . Parent=GSCOCT00028342001 | |
| 18140 chr1 manual_curation exon 31920076 31920638 . - . Parent=GSCOCT00028342001 | |
| 18141 chr1 manual_curation CDS 31918490 31918627 . - 0 Parent=GSCOCT00028342001 | |
| 18142 chr1 manual_curation CDS 31918691 31919166 . - 1 Parent=GSCOCT00028342001 | |
| 18143 chr1 manual_curation CDS 31919673 31919942 . - 1 Parent=GSCOCT00028342001 | |
| 18144 chr1 manual_curation CDS 31920076 31920469 . - 0 Parent=GSCOCT00028342001 | |
| 18145 chr1 manual_curation gene 31947156 31954082 . + . ID=GSCOCG00028345001;Name=Cc01_g13680 | |
| 18146 chr1 manual_curation mRNA 31947156 31954082 . + . ID=GSCOCT00028345001;Parent=GSCOCG00028345001;Name=Cc01_g13680 | |
| 18147 chr1 manual_curation polypeptide 31948088 31953756 . + . ID=GSCOCP00028345001;Dbxref=InterPro:IPR006823,PANTHER:PTHR12670,SwissProt:Q0JL46,SwissProt:Q304B9,SwissProt:Q55G11,TAIR:AT1G07380.1,TAIR:AT2G38010.2,TAIR:AT5G58980.1,TrEMBL:B9S377,TrEMBL:F6GUV6,TrEMBL:G7K4V4;Derives_from=GSCOCT00028345001;Name=Cc01_g13680;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Neutral ceramidase,CC_functional_completeness:complete,CC_gene:At2g38010,CC_gene:Os01g0624000,CC_gene:dcd2B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028345001~ Neutral ceramidase~ At2g38010~ complete;original_location=join(1760549..1760853%2C1761011..1761219%2C1762308..1762652%2C1762789..1763053%2C1763162..1763432%2C1763653..1763778%2C1764142..1764205%2C1764988..1765154%2C1765669..1766217);owner=coffea | |
| 18148 chr1 manual_curation exon 31947156 31947427 . + . Parent=GSCOCT00028345001 | |
| 18149 chr1 manual_curation exon 31947989 31948392 . + . Parent=GSCOCT00028345001 | |
| 18150 chr1 manual_curation exon 31948550 31948758 . + . Parent=GSCOCT00028345001 | |
| 18151 chr1 manual_curation exon 31949847 31950191 . + . Parent=GSCOCT00028345001 | |
| 18152 chr1 manual_curation exon 31950328 31950592 . + . Parent=GSCOCT00028345001 | |
| 18153 chr1 manual_curation exon 31950701 31950971 . + . Parent=GSCOCT00028345001 | |
| 18154 chr1 manual_curation exon 31951192 31951317 . + . Parent=GSCOCT00028345001 | |
| 18155 chr1 manual_curation exon 31951681 31951744 . + . Parent=GSCOCT00028345001 | |
| 18156 chr1 manual_curation exon 31952527 31952693 . + . Parent=GSCOCT00028345001 | |
| 18157 chr1 manual_curation exon 31953208 31954082 . + . Parent=GSCOCT00028345001 | |
| 18158 chr1 manual_curation CDS 31948088 31948392 . + 0 Parent=GSCOCT00028345001 | |
| 18159 chr1 manual_curation CDS 31948550 31948758 . + 2 Parent=GSCOCT00028345001 | |
| 18160 chr1 manual_curation CDS 31949847 31950191 . + 1 Parent=GSCOCT00028345001 | |
| 18161 chr1 manual_curation CDS 31950328 31950592 . + 1 Parent=GSCOCT00028345001 | |
| 18162 chr1 manual_curation CDS 31950701 31950971 . + 2 Parent=GSCOCT00028345001 | |
| 18163 chr1 manual_curation CDS 31951192 31951317 . + 0 Parent=GSCOCT00028345001 | |
| 18164 chr1 manual_curation CDS 31951681 31951744 . + 0 Parent=GSCOCT00028345001 | |
| 18165 chr1 manual_curation CDS 31952527 31952693 . + 1 Parent=GSCOCT00028345001 | |
| 18166 chr1 manual_curation CDS 31953208 31953756 . + 0 Parent=GSCOCT00028345001 | |
| 18167 chr1 manual_curation gene 31954297 31960901 . + . ID=GSCOCG00028346001;Name=Cc01_g13690 | |
| 18168 chr1 manual_curation mRNA 31954297 31960901 . + . ID=GSCOCT00028346001;Parent=GSCOCG00028346001;Name=Cc01_g13690 | |
| 18169 chr1 manual_curation polypeptide 31954556 31960382 . + . ID=GSCOCP00028346001;Dbxref=InterPro:IPR000941,InterPro:IPR020809,InterPro:IPR020810,InterPro:IPR020811,PFAM:PF00113,PFAM:PF03952,PRINTS:PR00148,PROSITE:PS00164,SwissProt:P09104,SwissProt:P17183,SwissProt:Q9ZW34,TAIR:AT1G74030.1,TAIR:AT2G29560.1,TAIR:AT2G36530.1,TrEMBL:A9P9U5,TrEMBL:F6GUV5,TrEMBL:G7K4W1;Derives_from=GSCOCT00028346001;Name=Cc01_g13690;Ontology_term=CC_evidence_code:ISS,GO:0000015,GO:0000287,GO:0004634,GO:0006096,CC_EC_number:4.2.1.11,PRODUCT:Cytosolic enolase 3,CC_functional_completeness:complete,CC_gene:ENO3,CC_gene:ENO2,CC_gene:Eno2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028346001~ Cytosolic enolase 3~ ENO3~ complete;original_location=join(1767017..1767121%2C1767217..1767371%2C1767588..1767762%2C1768628..1768720%2C1768830..1768928%2C1768991..1769107%2C1769329..1769409%2C1770199..1770275%2C1770367..1770470%2C1770791..1770889%2C1771038..1771123%2C1771690..1771776%2C1772108..1772305%2C1772775..1772843);owner=coffea | |
| 18170 chr1 manual_curation exon 31954297 31954660 . + . Parent=GSCOCT00028346001 | |
| 18171 chr1 manual_curation exon 31954756 31954910 . + . Parent=GSCOCT00028346001 | |
| 18172 chr1 manual_curation exon 31955127 31955301 . + . Parent=GSCOCT00028346001 | |
| 18173 chr1 manual_curation exon 31956167 31956259 . + . Parent=GSCOCT00028346001 | |
| 18174 chr1 manual_curation exon 31956369 31956467 . + . Parent=GSCOCT00028346001 | |
| 18175 chr1 manual_curation exon 31956530 31956646 . + . Parent=GSCOCT00028346001 | |
| 18176 chr1 manual_curation exon 31956868 31956948 . + . Parent=GSCOCT00028346001 | |
| 18177 chr1 manual_curation exon 31957738 31957814 . + . Parent=GSCOCT00028346001 | |
| 18178 chr1 manual_curation exon 31957906 31958009 . + . Parent=GSCOCT00028346001 | |
| 18179 chr1 manual_curation exon 31958330 31958428 . + . Parent=GSCOCT00028346001 | |
| 18180 chr1 manual_curation exon 31958577 31958662 . + . Parent=GSCOCT00028346001 | |
| 18181 chr1 manual_curation exon 31959229 31959315 . + . Parent=GSCOCT00028346001 | |
| 18182 chr1 manual_curation exon 31959647 31959844 . + . Parent=GSCOCT00028346001 | |
| 18183 chr1 manual_curation exon 31960314 31960901 . + . Parent=GSCOCT00028346001 | |
| 18184 chr1 manual_curation CDS 31954556 31954660 . + 0 Parent=GSCOCT00028346001 | |
| 18185 chr1 manual_curation CDS 31954756 31954910 . + 0 Parent=GSCOCT00028346001 | |
| 18186 chr1 manual_curation CDS 31955127 31955301 . + 2 Parent=GSCOCT00028346001 | |
| 18187 chr1 manual_curation CDS 31956167 31956259 . + 0 Parent=GSCOCT00028346001 | |
| 18188 chr1 manual_curation CDS 31956369 31956467 . + 0 Parent=GSCOCT00028346001 | |
| 18189 chr1 manual_curation CDS 31956530 31956646 . + 0 Parent=GSCOCT00028346001 | |
| 18190 chr1 manual_curation CDS 31956868 31956948 . + 0 Parent=GSCOCT00028346001 | |
| 18191 chr1 manual_curation CDS 31957738 31957814 . + 0 Parent=GSCOCT00028346001 | |
| 18192 chr1 manual_curation CDS 31957906 31958009 . + 2 Parent=GSCOCT00028346001 | |
| 18193 chr1 manual_curation CDS 31958330 31958428 . + 1 Parent=GSCOCT00028346001 | |
| 18194 chr1 manual_curation CDS 31958577 31958662 . + 1 Parent=GSCOCT00028346001 | |
| 18195 chr1 manual_curation CDS 31959229 31959315 . + 0 Parent=GSCOCT00028346001 | |
| 18196 chr1 manual_curation CDS 31959647 31959844 . + 0 Parent=GSCOCT00028346001 | |
| 18197 chr1 manual_curation CDS 31960314 31960382 . + 0 Parent=GSCOCT00028346001 | |
| 18198 chr1 manual_curation gene 31961243 31963298 . - . ID=GSCOCG00028347001;Name=Cc01_g13700 | |
| 18199 chr1 manual_curation mRNA 31961243 31963298 . - . ID=GSCOCT00028347001;Parent=GSCOCG00028347001;Name=Cc01_g13700 | |
| 18200 chr1 manual_curation polypeptide 31961582 31963177 . - . ID=GSCOCP00028347001;Dbxref=HAMAP:MF_00317,InterPro:IPR000730,InterPro:IPR022648,InterPro:IPR022649,InterPro:IPR022659,PANTHER:PTHR11352,PFAM:PF00705,PFAM:PF02747,PRINTS:PR00339,PROSITE:PS00293,PROSITE:PS01251,SwissProt:O82134,SwissProt:O82797,SwissProt:Q00268,TAIR:AT1G07370.1,TAIR:AT2G29570.1,TIGRFAMs:TIGR00590,TrEMBL:A5B6U5,TrEMBL:Q8H0Q1,TrEMBL:Q9FUI4;Derives_from=GSCOCT00028347001;Name=Cc01_g13700;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0006275,GO:0030337,GO:0043626,CC_EC_number:missing_EC_number,PRODUCT:Proliferating cell nuclear antigen,CC_functional_completeness:complete,CC_gene:PCNA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028347001~ Proliferating cell nuclear antigen~ PCNA~ complete;original_location=complement(join(1775320..1775638%2C1774599..1774751%2C1774382..1774479%2C1774043..1774267));owner=coffea | |
| 18201 chr1 manual_curation exon 31961243 31961806 . - . Parent=GSCOCT00028347001 | |
| 18202 chr1 manual_curation exon 31961921 31962018 . - . Parent=GSCOCT00028347001 | |
| 18203 chr1 manual_curation exon 31962138 31962290 . - . Parent=GSCOCT00028347001 | |
| 18204 chr1 manual_curation exon 31962859 31963298 . - . Parent=GSCOCT00028347001 | |
| 18205 chr1 manual_curation CDS 31961582 31961806 . - 0 Parent=GSCOCT00028347001 | |
| 18206 chr1 manual_curation CDS 31961921 31962018 . - 1 Parent=GSCOCT00028347001 | |
| 18207 chr1 manual_curation CDS 31962138 31962290 . - 1 Parent=GSCOCT00028347001 | |
| 18208 chr1 manual_curation CDS 31962859 31963177 . - 0 Parent=GSCOCT00028347001 | |
| 18209 chr1 manual_curation gene 31965902 31969176 . + . ID=GSCOCG00028348001;Name=Cc01_g13710 | |
| 18210 chr1 manual_curation mRNA 31965902 31969176 . + . ID=GSCOCT00028348001;Parent=GSCOCG00028348001;Name=Cc01_g13710 | |
| 18211 chr1 manual_curation polypeptide 31965982 31968715 . + . ID=GSCOCP00028348001;Dbxref=InterPro:IPR001993,InterPro:IPR002030,InterPro:IPR018108,PANTHER:PTHR11896,PFAM:PF00153,PRINTS:PR00784,PROFILE:PS50920,SUPERFAMILY:SSF103506,SwissProt:O77792,SwissProt:P56501,SwissProt:Q9W725,TAIR:AT1G14140.1,TAIR:AT3G54110.1,TAIR:AT5G58970.1,TrEMBL:B9S373,TrEMBL:C6T891,TrEMBL:D7SK40;Derives_from=GSCOCT00028348001;Name=Cc01_g13710;Ontology_term=CC_evidence_code:ISS,GO:0005488,GO:0005739,GO:0006810,GO:0006839,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Putative Mitochondrial uncoupling protein 3,CC_functional_completeness:complete,CC_gene:UCP3,CC_gene:Ucp3,CC_gene:ucp2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028348001~ Putative Mitochondrial uncoupling protein 3~ UCP3~ complete;original_location=join(1778443..1778514%2C1778760..1778984%2C1779079..1779157%2C1779248..1779381%2C1779478..1779576%2C1779678..1779782%2C1780209..1780283%2C1780689..1780775%2C1781156..1781176);owner=coffea | |
| 18212 chr1 manual_curation exon 31965902 31966053 . + . Parent=GSCOCT00028348001 | |
| 18213 chr1 manual_curation exon 31966299 31966523 . + . Parent=GSCOCT00028348001 | |
| 18214 chr1 manual_curation exon 31966618 31966696 . + . Parent=GSCOCT00028348001 | |
| 18215 chr1 manual_curation exon 31966787 31966920 . + . Parent=GSCOCT00028348001 | |
| 18216 chr1 manual_curation exon 31967017 31967115 . + . Parent=GSCOCT00028348001 | |
| 18217 chr1 manual_curation exon 31967217 31967321 . + . Parent=GSCOCT00028348001 | |
| 18218 chr1 manual_curation exon 31967748 31967822 . + . Parent=GSCOCT00028348001 | |
| 18219 chr1 manual_curation exon 31968228 31968314 . + . Parent=GSCOCT00028348001 | |
| 18220 chr1 manual_curation exon 31968695 31969176 . + . Parent=GSCOCT00028348001 | |
| 18221 chr1 manual_curation CDS 31965982 31966053 . + 0 Parent=GSCOCT00028348001 | |
| 18222 chr1 manual_curation CDS 31966299 31966523 . + 0 Parent=GSCOCT00028348001 | |
| 18223 chr1 manual_curation CDS 31966618 31966696 . + 0 Parent=GSCOCT00028348001 | |
| 18224 chr1 manual_curation CDS 31966787 31966920 . + 1 Parent=GSCOCT00028348001 | |
| 18225 chr1 manual_curation CDS 31967017 31967115 . + 0 Parent=GSCOCT00028348001 | |
| 18226 chr1 manual_curation CDS 31967217 31967321 . + 0 Parent=GSCOCT00028348001 | |
| 18227 chr1 manual_curation CDS 31967748 31967822 . + 0 Parent=GSCOCT00028348001 | |
| 18228 chr1 manual_curation CDS 31968228 31968314 . + 0 Parent=GSCOCT00028348001 | |
| 18229 chr1 manual_curation CDS 31968695 31968715 . + 0 Parent=GSCOCT00028348001 | |
| 18230 chr1 manual_curation gene 31969276 31971202 . - . ID=GSCOCG00028349001;Name=Cc01_g13720 | |
| 18231 chr1 manual_curation mRNA 31969276 31971202 . - . ID=GSCOCT00028349001;Parent=GSCOCG00028349001;Name=Cc01_g13720 | |
| 18232 chr1 manual_curation polypeptide 31969493 31971202 . - . ID=GSCOCP00028349001;Dbxref=InterPro:IPR006943,PFAM:PF04859,TAIR:AT1G29300.1,TAIR:AT2G45260.1,TAIR:AT5G58960.1,TrEMBL:B9S372,TrEMBL:F6GUV2,TrEMBL:I1KYU1;Derives_from=GSCOCT00028349001;Name=Cc01_g13720;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Plant protein of unknown function (DUF641),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028349001~ Plant protein of unknown function (DUF641)~ unknown_gene~ complete;original_location=complement(join(1783390..1783663%2C1782886..1783335%2C1781954..1782768));owner=coffea | |
| 18233 chr1 manual_curation exon 31969276 31970307 . - . Parent=GSCOCT00028349001 | |
| 18234 chr1 manual_curation exon 31970425 31970874 . - . Parent=GSCOCT00028349001 | |
| 18235 chr1 manual_curation exon 31970929 31971202 . - . Parent=GSCOCT00028349001 | |
| 18236 chr1 manual_curation CDS 31969493 31970307 . - 1 Parent=GSCOCT00028349001 | |
| 18237 chr1 manual_curation CDS 31970425 31970874 . - 1 Parent=GSCOCT00028349001 | |
| 18238 chr1 manual_curation CDS 31970929 31971202 . - 0 Parent=GSCOCT00028349001 | |
| 18239 chr1 manual_curation gene 31975183 31976434 . + . ID=GSCOCG00028350001;Name=Cc01_g13730 | |
| 18240 chr1 manual_curation mRNA 31975183 31976434 . + . ID=GSCOCT00028350001;Parent=GSCOCG00028350001;Name=Cc01_g13730 | |
| 18241 chr1 manual_curation polypeptide 31975362 31976314 . + . ID=GSCOCP00028350001;Dbxref=TAIR:AT4G37300.1,TrEMBL:B9S371,TrEMBL:D9IZZ7,TrEMBL:D9IZZ9;Derives_from=GSCOCT00028350001;Name=Cc01_g13730;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative maternal effect embryo arrest 59,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028350001~ Putative maternal effect embryo arrest 59~ unknown_gene~ complete;original_location=join(1787823..1788041%2C1788185..1788280%2C1788485..1788622%2C1788734..1788775);owner=coffea | |
| 18242 chr1 manual_curation exon 31975183 31975580 . + . Parent=GSCOCT00028350001 | |
| 18243 chr1 manual_curation exon 31975724 31975819 . + . Parent=GSCOCT00028350001 | |
| 18244 chr1 manual_curation exon 31976024 31976161 . + . Parent=GSCOCT00028350001 | |
| 18245 chr1 manual_curation exon 31976273 31976434 . + . Parent=GSCOCT00028350001 | |
| 18246 chr1 manual_curation CDS 31975362 31975580 . + 0 Parent=GSCOCT00028350001 | |
| 18247 chr1 manual_curation CDS 31975724 31975819 . + 0 Parent=GSCOCT00028350001 | |
| 18248 chr1 manual_curation CDS 31976024 31976161 . + 0 Parent=GSCOCT00028350001 | |
| 18249 chr1 manual_curation CDS 31976273 31976314 . + 0 Parent=GSCOCT00028350001 | |
| 18250 chr1 manual_curation gene 31976484 31992134 . - . ID=GSCOCG00028351001;Name=Cc01_g13740 | |
| 18251 chr1 manual_curation mRNA 31976484 31992134 . - . ID=GSCOCT00028351001;Parent=GSCOCG00028351001;Name=Cc01_g13740 | |
| 18252 chr1 manual_curation polypeptide 31976688 31991930 . - . ID=GSCOCP00028351001;Dbxref=InterPro:IPR001650,InterPro:IPR011545,InterPro:IPR012961,InterPro:IPR014001,InterPro:IPR014021,InterPro:IPR016438,PFAM:PF00270,PFAM:PF00271,PFAM:PF08148,PIR:PIRSF005198,PROFILE:PS51192,PROFILE:PS51194,SMART:SM00487,SMART:SM00490,SwissProt:O59801,SwissProt:P47047,SwissProt:Q15477,TAIR:AT1G59760.1,TAIR:AT2G06990.1,TAIR:AT3G46960.1,TrEMBL:B9S370,TrEMBL:D7LN90,TrEMBL:I1N032;Derives_from=GSCOCT00028351001;Name=Cc01_g13740;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0004386,GO:0005524,GO:0008026,CC_EC_number:missing_EC_number,PRODUCT:Putative Helicase SKI2W,CC_functional_completeness:complete,CC_gene:SKIV2L,CC_gene:SPCC550.03c,CC_gene:MTR4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028351001~ Putative Helicase SKI2W~ SKIV2L~ complete;original_location=complement(join(1804257..1804391%2C1802621..1802878%2C1802140..1802400%2C1801950..1802018%2C1801717..1801792%2C1800761..1800966%2C1800444..1800551%2C1799944..1800045%2C1799587..1799787%2C1799302..1799412%2C1797530..1797597%2C1796985..1797369%2C1796531..1796686%2C1796331..1796441%2C1795562..1795615%2C1794441..1794698%2C1793581..1793690%2C1793151..1793304%2C1792166..1792622%2C1790991..1791205%2C1790661..1790899%2C1789559..1789685%2C1789149..1789361));owner=coffea | |
| 18253 chr1 manual_curation exon 31976484 31976900 . - . Parent=GSCOCT00028351001 | |
| 18254 chr1 manual_curation exon 31977098 31977224 . - . Parent=GSCOCT00028351001 | |
| 18255 chr1 manual_curation exon 31978200 31978438 . - . Parent=GSCOCT00028351001 | |
| 18256 chr1 manual_curation exon 31978530 31978744 . - . Parent=GSCOCT00028351001 | |
| 18257 chr1 manual_curation exon 31979705 31980161 . - . Parent=GSCOCT00028351001 | |
| 18258 chr1 manual_curation exon 31980690 31980843 . - . Parent=GSCOCT00028351001 | |
| 18259 chr1 manual_curation exon 31981120 31981229 . - . Parent=GSCOCT00028351001 | |
| 18260 chr1 manual_curation exon 31981980 31982237 . - . Parent=GSCOCT00028351001 | |
| 18261 chr1 manual_curation exon 31983101 31983154 . - . Parent=GSCOCT00028351001 | |
| 18262 chr1 manual_curation exon 31983870 31983980 . - . Parent=GSCOCT00028351001 | |
| 18263 chr1 manual_curation exon 31984070 31984225 . - . Parent=GSCOCT00028351001 | |
| 18264 chr1 manual_curation exon 31984524 31984908 . - . Parent=GSCOCT00028351001 | |
| 18265 chr1 manual_curation exon 31985069 31985136 . - . Parent=GSCOCT00028351001 | |
| 18266 chr1 manual_curation exon 31986841 31986951 . - . Parent=GSCOCT00028351001 | |
| 18267 chr1 manual_curation exon 31987126 31987326 . - . Parent=GSCOCT00028351001 | |
| 18268 chr1 manual_curation exon 31987483 31987584 . - . Parent=GSCOCT00028351001 | |
| 18269 chr1 manual_curation exon 31987983 31988090 . - . Parent=GSCOCT00028351001 | |
| 18270 chr1 manual_curation exon 31988300 31988505 . - . Parent=GSCOCT00028351001 | |
| 18271 chr1 manual_curation exon 31989256 31989331 . - . Parent=GSCOCT00028351001 | |
| 18272 chr1 manual_curation exon 31989489 31989557 . - . Parent=GSCOCT00028351001 | |
| 18273 chr1 manual_curation exon 31989679 31989939 . - . Parent=GSCOCT00028351001 | |
| 18274 chr1 manual_curation exon 31990160 31990417 . - . Parent=GSCOCT00028351001 | |
| 18275 chr1 manual_curation exon 31991796 31992134 . - . Parent=GSCOCT00028351001 | |
| 18276 chr1 manual_curation CDS 31976688 31976900 . - 0 Parent=GSCOCT00028351001 | |
| 18277 chr1 manual_curation CDS 31977098 31977224 . - 2 Parent=GSCOCT00028351001 | |
| 18278 chr1 manual_curation CDS 31978200 31978438 . - 0 Parent=GSCOCT00028351001 | |
| 18279 chr1 manual_curation CDS 31978530 31978744 . - 1 Parent=GSCOCT00028351001 | |
| 18280 chr1 manual_curation CDS 31979705 31980161 . - 0 Parent=GSCOCT00028351001 | |
| 18281 chr1 manual_curation CDS 31980690 31980843 . - 2 Parent=GSCOCT00028351001 | |
| 18282 chr1 manual_curation CDS 31981120 31981229 . - 0 Parent=GSCOCT00028351001 | |
| 18283 chr1 manual_curation CDS 31981980 31982237 . - 0 Parent=GSCOCT00028351001 | |
| 18284 chr1 manual_curation CDS 31983101 31983154 . - 0 Parent=GSCOCT00028351001 | |
| 18285 chr1 manual_curation CDS 31983870 31983980 . - 0 Parent=GSCOCT00028351001 | |
| 18286 chr1 manual_curation CDS 31984070 31984225 . - 0 Parent=GSCOCT00028351001 | |
| 18287 chr1 manual_curation CDS 31984524 31984908 . - 2 Parent=GSCOCT00028351001 | |
| 18288 chr1 manual_curation CDS 31985069 31985136 . - 0 Parent=GSCOCT00028351001 | |
| 18289 chr1 manual_curation CDS 31986841 31986951 . - 0 Parent=GSCOCT00028351001 | |
| 18290 chr1 manual_curation CDS 31987126 31987326 . - 0 Parent=GSCOCT00028351001 | |
| 18291 chr1 manual_curation CDS 31987483 31987584 . - 0 Parent=GSCOCT00028351001 | |
| 18292 chr1 manual_curation CDS 31987983 31988090 . - 0 Parent=GSCOCT00028351001 | |
| 18293 chr1 manual_curation CDS 31988300 31988505 . - 1 Parent=GSCOCT00028351001 | |
| 18294 chr1 manual_curation CDS 31989256 31989331 . - 0 Parent=GSCOCT00028351001 | |
| 18295 chr1 manual_curation CDS 31989489 31989557 . - 0 Parent=GSCOCT00028351001 | |
| 18296 chr1 manual_curation CDS 31989679 31989939 . - 0 Parent=GSCOCT00028351001 | |
| 18297 chr1 manual_curation CDS 31990160 31990417 . - 0 Parent=GSCOCT00028351001 | |
| 18298 chr1 manual_curation CDS 31991796 31991930 . - 0 Parent=GSCOCT00028351001 | |
| 18299 chr1 manual_curation gene 31994075 31998073 . + . ID=GSCOCG00028352001;Name=Cc01_g13750 | |
| 18300 chr1 manual_curation mRNA 31994075 31998073 . + . ID=GSCOCT00028352001;Parent=GSCOCG00028352001;Name=Cc01_g13750 | |
| 18301 chr1 manual_curation polypeptide 31995001 31997443 . + . ID=GSCOCP00028352001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR012677,PFAM:PF00076,PROFILE:PS50102,SMART:SM00360,SwissProt:Q10422,TAIR:AT1G07350.1,TAIR:AT4G35785.5,TrEMBL:B9HP82,TrEMBL:I1KYU5,TrEMBL:Q84QA6;Derives_from=GSCOCT00028352001;Name=Cc01_g13750;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,CC_EC_number:missing_EC_number,PRODUCT:Predicted protein,CC_functional_completeness:complete,CC_gene:SPAC25G10.01;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028352001~ Predicted protein~ SPAC25G10.01~ complete;original_location=join(1807462..1807484%2C1807565..1807639%2C1807795..1807906%2C1808527..1808676%2C1808811..1808836%2C1808890..1808914%2C1809103..1809166%2C1809288..1809904);owner=coffea | |
| 18302 chr1 manual_curation exon 31994075 31995023 . + . Parent=GSCOCT00028352001 | |
| 18303 chr1 manual_curation exon 31995104 31995178 . + . Parent=GSCOCT00028352001 | |
| 18304 chr1 manual_curation exon 31995334 31995445 . + . Parent=GSCOCT00028352001 | |
| 18305 chr1 manual_curation exon 31996066 31996215 . + . Parent=GSCOCT00028352001 | |
| 18306 chr1 manual_curation exon 31996350 31996375 . + . Parent=GSCOCT00028352001 | |
| 18307 chr1 manual_curation exon 31996429 31996453 . + . Parent=GSCOCT00028352001 | |
| 18308 chr1 manual_curation exon 31996642 31996705 . + . Parent=GSCOCT00028352001 | |
| 18309 chr1 manual_curation exon 31996827 31998073 . + . Parent=GSCOCT00028352001 | |
| 18310 chr1 manual_curation CDS 31995001 31995023 . + 0 Parent=GSCOCT00028352001 | |
| 18311 chr1 manual_curation CDS 31995104 31995178 . + 2 Parent=GSCOCT00028352001 | |
| 18312 chr1 manual_curation CDS 31995334 31995445 . + 2 Parent=GSCOCT00028352001 | |
| 18313 chr1 manual_curation CDS 31996066 31996215 . + 0 Parent=GSCOCT00028352001 | |
| 18314 chr1 manual_curation CDS 31996350 31996375 . + 0 Parent=GSCOCT00028352001 | |
| 18315 chr1 manual_curation CDS 31996429 31996453 . + 2 Parent=GSCOCT00028352001 | |
| 18316 chr1 manual_curation CDS 31996642 31996705 . + 0 Parent=GSCOCT00028352001 | |
| 18317 chr1 manual_curation CDS 31996827 31997443 . + 1 Parent=GSCOCT00028352001 | |
| 18318 chr1 manual_curation gene 31999234 32008655 . - . ID=GSCOCG00028354001;Name=Cc01_g13760 | |
| 18319 chr1 manual_curation mRNA 31999234 32008655 . - . ID=GSCOCT00028354001;Parent=GSCOCG00028354001;Name=Cc01_g13760 | |
| 18320 chr1 manual_curation polypeptide 31999491 32007814 . - . ID=GSCOCP00028354001;Dbxref=InterPro:IPR000811,InterPro:IPR011833,PANTHER:PTHR11468,PFAM:PF00343,PIR:PIRSF000460,PROSITE:PS00102,SwissProt:P32811,SwissProt:P53537,SwissProt:Q9SD76,TAIR:AT3G29320.1,TAIR:AT3G46970.1,TIGRFAMs:TIGR02093,TrEMBL:B9HP81,TrEMBL:B9S366,TrEMBL:D7SK33;Derives_from=GSCOCT00028354001;Name=Cc01_g13760;Ontology_term=CC_evidence_code:ISS,GO:0004645,GO:0005975,GO:0030170,CC_EC_number:2.4.1.1,PRODUCT:Alpha-glucan phosphorylase%2C H isozyme,CC_functional_completeness:complete,CC_gene:At3g46970;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028354001~ Alpha-glucan phosphorylase%2C H isozyme~ At3g46970~ complete;original_location=complement(join(1820057..1820275%2C1819226..1819405%2C1818807..1818983%2C1818642..1818727%2C1818303..1818492%2C1818017..1818109%2C1817482..1817666%2C1816977..1817094%2C1816764..1816892%2C1815907..1816125%2C1815586..1815789%2C1814962..1815120%2C1813838..1814101%2C1812930..1813120%2C1811952..1812078));owner=coffea | |
| 18321 chr1 manual_curation exon 32008046 32008106 . - . Parent=GSCOCT00028354001 | |
| 18322 chr1 manual_curation exon 32008396 32008655 . - . Parent=GSCOCT00028354001 | |
| 18323 chr1 manual_curation exon 31999234 31999617 . - . Parent=GSCOCT00028354001 | |
| 18324 chr1 manual_curation exon 32000469 32000659 . - . Parent=GSCOCT00028354001 | |
| 18325 chr1 manual_curation exon 32001377 32001640 . - . Parent=GSCOCT00028354001 | |
| 18326 chr1 manual_curation exon 32002501 32002659 . - . Parent=GSCOCT00028354001 | |
| 18327 chr1 manual_curation exon 32003125 32003328 . - . Parent=GSCOCT00028354001 | |
| 18328 chr1 manual_curation exon 32003446 32003664 . - . Parent=GSCOCT00028354001 | |
| 18329 chr1 manual_curation exon 32004303 32004431 . - . Parent=GSCOCT00028354001 | |
| 18330 chr1 manual_curation exon 32004516 32004633 . - . Parent=GSCOCT00028354001 | |
| 18331 chr1 manual_curation exon 32005021 32005205 . - . Parent=GSCOCT00028354001 | |
| 18332 chr1 manual_curation exon 32005556 32005648 . - . Parent=GSCOCT00028354001 | |
| 18333 chr1 manual_curation exon 32005842 32006031 . - . Parent=GSCOCT00028354001 | |
| 18334 chr1 manual_curation exon 32006181 32006266 . - . Parent=GSCOCT00028354001 | |
| 18335 chr1 manual_curation exon 32006346 32006522 . - . Parent=GSCOCT00028354001 | |
| 18336 chr1 manual_curation exon 32006765 32006944 . - . Parent=GSCOCT00028354001 | |
| 18337 chr1 manual_curation exon 32007596 32007844 . - . Parent=GSCOCT00028354001 | |
| 18338 chr1 manual_curation CDS 31999491 31999617 . - 2 Parent=GSCOCT00028354001 | |
| 18339 chr1 manual_curation CDS 32000469 32000659 . - 0 Parent=GSCOCT00028354001 | |
| 18340 chr1 manual_curation CDS 32001377 32001640 . - 0 Parent=GSCOCT00028354001 | |
| 18341 chr1 manual_curation CDS 32002501 32002659 . - 0 Parent=GSCOCT00028354001 | |
| 18342 chr1 manual_curation CDS 32003125 32003328 . - 0 Parent=GSCOCT00028354001 | |
| 18343 chr1 manual_curation CDS 32003446 32003664 . - 0 Parent=GSCOCT00028354001 | |
| 18344 chr1 manual_curation CDS 32004303 32004431 . - 0 Parent=GSCOCT00028354001 | |
| 18345 chr1 manual_curation CDS 32004516 32004633 . - 2 Parent=GSCOCT00028354001 | |
| 18346 chr1 manual_curation CDS 32005021 32005205 . - 0 Parent=GSCOCT00028354001 | |
| 18347 chr1 manual_curation CDS 32005556 32005648 . - 0 Parent=GSCOCT00028354001 | |
| 18348 chr1 manual_curation CDS 32005842 32006031 . - 2 Parent=GSCOCT00028354001 | |
| 18349 chr1 manual_curation CDS 32006181 32006266 . - 0 Parent=GSCOCT00028354001 | |
| 18350 chr1 manual_curation CDS 32006346 32006522 . - 0 Parent=GSCOCT00028354001 | |
| 18351 chr1 manual_curation CDS 32006765 32006944 . - 0 Parent=GSCOCT00028354001 | |
| 18352 chr1 manual_curation CDS 32007596 32007814 . - 0 Parent=GSCOCT00028354001 | |
| 18353 chr1 manual_curation gene 32008991 32012001 . - . ID=GSCOCG00028355001;Name=Cc01_g13770 | |
| 18354 chr1 manual_curation mRNA 32008991 32012001 . - . ID=GSCOCT00028355001;Parent=GSCOCG00028355001;Name=Cc01_g13770 | |
| 18355 chr1 manual_curation polypeptide 32009068 32011673 . - . ID=GSCOCP00028355001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR020635,PFAM:PF07714,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:C0LGD7,SwissProt:Q8VZJ9,SwissProt:Q9CAL8,TAIR:AT2G11520.1,TAIR:AT4G00330.1,TAIR:AT5G58940.1,TrEMBL:D7SK32,TrEMBL:D8V833,TrEMBL:I1LLF5;Derives_from=GSCOCT00028355001;Name=Cc01_g13770;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.10.2,PRODUCT:Probable leucine-rich repeat receptor-like protein kinase At4g00330,CC_functional_completeness:complete,CC_gene:At4g00330,CC_gene:At1g06840,CC_gene:PERK13;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028355001~ Probable leucine-rich repeat receptor-like protein kinase At4g00330~ At4g00330~ complete;original_location=complement(join(1823873..1824134%2C1823364..1823608%2C1823111..1823279%2C1822421..1822510%2C1822024..1822322%2C1821529..1821900));owner=coffea | |
| 18356 chr1 manual_curation exon 32008991 32009439 . - . Parent=GSCOCT00028355001 | |
| 18357 chr1 manual_curation exon 32009563 32009861 . - . Parent=GSCOCT00028355001 | |
| 18358 chr1 manual_curation exon 32009960 32010049 . - . Parent=GSCOCT00028355001 | |
| 18359 chr1 manual_curation exon 32010650 32010818 . - . Parent=GSCOCT00028355001 | |
| 18360 chr1 manual_curation exon 32010903 32011147 . - . Parent=GSCOCT00028355001 | |
| 18361 chr1 manual_curation exon 32011412 32012001 . - . Parent=GSCOCT00028355001 | |
| 18362 chr1 manual_curation CDS 32009068 32009439 . - 0 Parent=GSCOCT00028355001 | |
| 18363 chr1 manual_curation CDS 32009563 32009861 . - 1 Parent=GSCOCT00028355001 | |
| 18364 chr1 manual_curation CDS 32009960 32010049 . - 1 Parent=GSCOCT00028355001 | |
| 18365 chr1 manual_curation CDS 32010650 32010818 . - 0 Parent=GSCOCT00028355001 | |
| 18366 chr1 manual_curation CDS 32010903 32011147 . - 1 Parent=GSCOCT00028355001 | |
| 18367 chr1 manual_curation CDS 32011412 32011673 . - 0 Parent=GSCOCT00028355001 | |
| 18368 chr1 manual_curation gene 32012483 32018146 . - . ID=GSCOCG00028356001;Name=Cc01_g13780 | |
| 18369 chr1 manual_curation mRNA 32012483 32018146 . - . ID=GSCOCT00028356001;Parent=GSCOCG00028356001;Name=Cc01_g13780 | |
| 18370 chr1 manual_curation polypeptide 32012899 32017378 . - . ID=GSCOCP00028356001;Dbxref=InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,PFAM:PF07690,PROFILE:PS50850,SUPERFAMILY:SSF103473,SwissProt:Q66GI9,SwissProt:Q7XJR2,SwissProt:Q8W0H5,TAIR:AT2G38060.1,TAIR:AT3G46980.3,TAIR:AT4G00370.1,TrEMBL:B9GIV5,TrEMBL:B9S364,TrEMBL:F6GUU7;Derives_from=GSCOCT00028356001;Name=Cc01_g13780;Ontology_term=CC_evidence_code:ISS,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Probable anion transporter 4%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:ANTR4,CC_gene:PHT4%3B3,CC_gene:ANTR3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028356001~ Probable anion transporter 4%2C chloroplastic~ ANTR4~ fragment;original_location=complement(join(1829726..1829839%2C1828119..1828345%2C1827625..1827991%2C1827116..1827160%2C1826882..1827028%2C1825959..1826096%2C1825840..1825873%2C1825360..1825544));owner=coffea | |
| 18371 chr1 manual_curation exon 32012483 32013083 . - . Parent=GSCOCT00028356001 | |
| 18372 chr1 manual_curation exon 32013379 32013412 . - . Parent=GSCOCT00028356001 | |
| 18373 chr1 manual_curation exon 32013498 32013635 . - . Parent=GSCOCT00028356001 | |
| 18374 chr1 manual_curation exon 32014421 32014567 . - . Parent=GSCOCT00028356001 | |
| 18375 chr1 manual_curation exon 32014655 32014699 . - . Parent=GSCOCT00028356001 | |
| 18376 chr1 manual_curation exon 32015164 32015530 . - . Parent=GSCOCT00028356001 | |
| 18377 chr1 manual_curation exon 32015658 32015884 . - . Parent=GSCOCT00028356001 | |
| 18378 chr1 manual_curation exon 32017265 32018146 . - . Parent=GSCOCT00028356001 | |
| 18379 chr1 manual_curation CDS 32012899 32013083 . - 1 Parent=GSCOCT00028356001 | |
| 18380 chr1 manual_curation CDS 32013379 32013412 . - 0 Parent=GSCOCT00028356001 | |
| 18381 chr1 manual_curation CDS 32013498 32013635 . - 0 Parent=GSCOCT00028356001 | |
| 18382 chr1 manual_curation CDS 32014421 32014567 . - 0 Parent=GSCOCT00028356001 | |
| 18383 chr1 manual_curation CDS 32014655 32014699 . - 0 Parent=GSCOCT00028356001 | |
| 18384 chr1 manual_curation CDS 32015164 32015530 . - 2 Parent=GSCOCT00028356001 | |
| 18385 chr1 manual_curation CDS 32015658 32015884 . - 0 Parent=GSCOCT00028356001 | |
| 18386 chr1 manual_curation CDS 32017265 32017378 . - 0 Parent=GSCOCT00028356001 | |
| 18387 chr1 manual_curation gene 32020509 32021946 . - . ID=GSCOCG00028359001;Name=Cc01_g13790 | |
| 18388 chr1 manual_curation mRNA 32020509 32021946 . - . ID=GSCOCT00028359001;Parent=GSCOCG00028359001;Name=Cc01_g13790 | |
| 18389 chr1 manual_curation polypeptide 32020894 32021879 . - . ID=GSCOCP00028359001;Dbxref=InterPro:IPR006683,PFAM:PF03061,TAIR:AT1G04290.1,TAIR:AT2G29590.1,TAIR:AT3G16175.1,TrEMBL:B9S362,TrEMBL:D7SK30,TrEMBL:I1JHA4;Derives_from=GSCOCT00028359001;Name=Cc01_g13790;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Thioesterase superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028359001~ Thioesterase superfamily protein~ unknown_gene~ complete;original_location=complement(join(1834149..1834340%2C1833841..1833981%2C1833355..1833498));owner=coffea | |
| 18390 chr1 manual_curation exon 32020509 32021037 . - . Parent=GSCOCT00028359001 | |
| 18391 chr1 manual_curation exon 32021380 32021520 . - . Parent=GSCOCT00028359001 | |
| 18392 chr1 manual_curation exon 32021688 32021946 . - . Parent=GSCOCT00028359001 | |
| 18393 chr1 manual_curation CDS 32020894 32021037 . - 0 Parent=GSCOCT00028359001 | |
| 18394 chr1 manual_curation CDS 32021380 32021520 . - 0 Parent=GSCOCT00028359001 | |
| 18395 chr1 manual_curation CDS 32021688 32021879 . - 0 Parent=GSCOCT00028359001 | |
| 18396 chr1 manual_curation gene 32024884 32027199 . + . ID=GSCOCG00028360001;Name=Cc01_g13800 | |
| 18397 chr1 manual_curation mRNA 32024884 32027199 . + . ID=GSCOCT00028360001;Parent=GSCOCG00028360001;Name=Cc01_g13800 | |
| 18398 chr1 manual_curation polypeptide 32025169 32026977 . + . ID=GSCOCP00028360001;Dbxref=InterPro:IPR008004,PFAM:PF05340,SwissProt:Q9SS80,TAIR:AT2G38070.1,TAIR:AT3G09070.1,TAIR:AT5G01170.1,TrEMBL:A5BPV7,TrEMBL:F6GUU6,TrEMBL:F6HKX2;Derives_from=GSCOCT00028360001;Name=Cc01_g13800;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of unknown function (DUF740),CC_functional_completeness:complete,CC_gene:At3g09070;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028360001~ Putative Protein of unknown function (DUF740)~ At3g09070~ complete;original_location=1837630..1839438;owner=coffea | |
| 18399 chr1 manual_curation exon 32024884 32027199 . + . Parent=GSCOCT00028360001 | |
| 18400 chr1 manual_curation CDS 32025169 32026977 . + 0 Parent=GSCOCT00028360001 | |
| 18401 chr1 manual_curation gene 32027655 32029356 . - . ID=GSCOCG00028361001;Name=Cc01_g13810 | |
| 18402 chr1 manual_curation mRNA 32027655 32029356 . - . ID=GSCOCT00028361001;Parent=GSCOCG00028361001;Name=Cc01_g13810 | |
| 18403 chr1 manual_curation polypeptide 32027819 32028556 . - . ID=GSCOCP00028361001;Dbxref=SwissProt:Q84JT7,SwissProt:Q9LDD4,TAIR:AT2G46040.1,TAIR:AT4G11400.1,TAIR:AT5G04110.1,TrEMBL:A5AU33,TrEMBL:A5BPV8,TrEMBL:F6HUL5;Derives_from=GSCOCT00028361001;Name=Cc01_g13810;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:ARID2,CC_gene:ARID1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028361001~ Putative uncharacterized protein~ ARID2~ complete;original_location=complement(1840280..1841017);owner=coffea | |
| 18404 chr1 manual_curation exon 32028859 32029356 . - . Parent=GSCOCT00028361001 | |
| 18405 chr1 manual_curation exon 32027655 32028565 . - . Parent=GSCOCT00028361001 | |
| 18406 chr1 manual_curation CDS 32027819 32028556 . - 0 Parent=GSCOCT00028361001 | |
| 18407 chr1 manual_curation gene 32037101 32038431 . - . ID=GSCOCG00028364001;Name=Cc01_g13820 | |
| 18408 chr1 manual_curation mRNA 32037101 32038431 . - . ID=GSCOCT00028364001;Parent=GSCOCG00028364001;Name=Cc01_g13820 | |
| 18409 chr1 manual_curation polypeptide 32037458 32038129 . - . ID=GSCOCP00028364001;Dbxref=TAIR:AT5G58920.1,TrEMBL:B9HP76,TrEMBL:B9RT12,TrEMBL:B9S360;Derives_from=GSCOCT00028364001;Name=Cc01_g13820;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B Has 1807 Blast hits to 1807 proteins in 277 species,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028364001~ unknown protein%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(1850557..1850590%2C1849919..1850358));owner=coffea | |
| 18410 chr1 manual_curation exon 32038388 32038431 . - . Parent=GSCOCT00028364001 | |
| 18411 chr1 manual_curation exon 32037101 32037897 . - . Parent=GSCOCT00028364001 | |
| 18412 chr1 manual_curation exon 32038096 32038240 . - . Parent=GSCOCT00028364001 | |
| 18413 chr1 manual_curation CDS 32037458 32037897 . - 1 Parent=GSCOCT00028364001 | |
| 18414 chr1 manual_curation CDS 32038096 32038129 . - 0 Parent=GSCOCT00028364001 | |
| 18415 chr1 manual_curation gene 32038594 32043225 . - . ID=GSCOCG00028365001;Name=Cc01_g13830 | |
| 18416 chr1 manual_curation mRNA 32038594 32043225 . - . ID=GSCOCT00028365001;Parent=GSCOCG00028365001;Name=Cc01_g13830 | |
| 18417 chr1 manual_curation polypeptide 32038868 32041840 . - . ID=GSCOCP00028365001;Dbxref=InterPro:IPR000109,InterPro:IPR016196,InterPro:IPR018456,PFAM:PF00854,PROSITE:PS01023,SUPERFAMILY:SSF103473,SwissProt:P46032,SwissProt:Q9LFB8,SwissProt:Q9M390,TAIR:AT2G02040.1,TAIR:AT3G54140.1,TAIR:AT5G01180.1,TrEMBL:B9GIV2,TrEMBL:B9HP75,TrEMBL:I1LLE9;Derives_from=GSCOCT00028365001;Name=Cc01_g13830;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006857,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Peptide transporter PTR1,CC_functional_completeness:complete,CC_gene:PTR1,CC_gene:PTR5,CC_gene:PTR2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028365001~ Peptide transporter PTR1~ PTR1~ complete;original_location=complement(join(1854196..1854301%2C1853885..1854102%2C1852899..1853452%2C1851329..1852163));owner=coffea | |
| 18418 chr1 manual_curation exon 32043019 32043225 . - . Parent=GSCOCT00028365001 | |
| 18419 chr1 manual_curation exon 32038594 32039702 . - . Parent=GSCOCT00028365001 | |
| 18420 chr1 manual_curation exon 32040438 32040991 . - . Parent=GSCOCT00028365001 | |
| 18421 chr1 manual_curation exon 32041424 32041641 . - . Parent=GSCOCT00028365001 | |
| 18422 chr1 manual_curation exon 32041735 32041933 . - . Parent=GSCOCT00028365001 | |
| 18423 chr1 manual_curation CDS 32038868 32039702 . - 2 Parent=GSCOCT00028365001 | |
| 18424 chr1 manual_curation CDS 32040438 32040991 . - 0 Parent=GSCOCT00028365001 | |
| 18425 chr1 manual_curation CDS 32041424 32041641 . - 1 Parent=GSCOCT00028365001 | |
| 18426 chr1 manual_curation CDS 32041735 32041840 . - 0 Parent=GSCOCT00028365001 | |
| 18427 chr1 manual_curation gene 32043347 32048230 . - . ID=GSCOCG00028366001;Name=Cc01_g13840 | |
| 18428 chr1 manual_curation mRNA 32043347 32048230 . - . ID=GSCOCT00028366001;Parent=GSCOCG00028366001;Name=Cc01_g13840 | |
| 18429 chr1 manual_curation polypeptide 32043347 32048230 . - . ID=GSCOCP00028366001;Dbxref=InterPro:IPR000109,InterPro:IPR016196,InterPro:IPR018456,PFAM:PF00854,PROSITE:PS01023,SUPERFAMILY:SSF103473,SwissProt:P46032,SwissProt:Q9LFB8,SwissProt:Q9M390,TAIR:AT2G02040.1,TAIR:AT3G54140.1,TAIR:AT5G01180.1,TrEMBL:B9GIV2,TrEMBL:B9S358,TrEMBL:F6HKW9;Derives_from=GSCOCT00028366001;Name=Cc01_g13840;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006857,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Peptide transporter PTR5,CC_functional_completeness:complete,CC_gene:PTR5,CC_gene:PTR1,CC_gene:PTR2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028366001~ Peptide transporter PTR5~ PTR5~ complete;original_location=complement(join(1860586..1860691%2C1860280..1860497%2C1859432..1859985%2C1858301..1859101%2C1857018..1857086%2C1855808..1855874));owner=coffea | |
| 18430 chr1 manual_curation exon 32043347 32043413 . - . Parent=GSCOCT00028366001 | |
| 18431 chr1 manual_curation exon 32044557 32044625 . - . Parent=GSCOCT00028366001 | |
| 18432 chr1 manual_curation exon 32045840 32046640 . - . Parent=GSCOCT00028366001 | |
| 18433 chr1 manual_curation exon 32046971 32047524 . - . Parent=GSCOCT00028366001 | |
| 18434 chr1 manual_curation exon 32047819 32048036 . - . Parent=GSCOCT00028366001 | |
| 18435 chr1 manual_curation exon 32048125 32048230 . - . Parent=GSCOCT00028366001 | |
| 18436 chr1 manual_curation CDS 32043347 32043413 . - 2 Parent=GSCOCT00028366001 | |
| 18437 chr1 manual_curation CDS 32044557 32044625 . - 2 Parent=GSCOCT00028366001 | |
| 18438 chr1 manual_curation CDS 32045840 32046640 . - 2 Parent=GSCOCT00028366001 | |
| 18439 chr1 manual_curation CDS 32046971 32047524 . - 0 Parent=GSCOCT00028366001 | |
| 18440 chr1 manual_curation CDS 32047819 32048036 . - 1 Parent=GSCOCT00028366001 | |
| 18441 chr1 manual_curation CDS 32048125 32048230 . - 0 Parent=GSCOCT00028366001 | |
| 18442 chr1 manual_curation gene 32052637 32056507 . - . ID=GSCOCG00028367001;Name=Cc01_g13850 | |
| 18443 chr1 manual_curation mRNA 32052637 32056507 . - . ID=GSCOCT00028367001;Parent=GSCOCG00028367001;Name=Cc01_g13850 | |
| 18444 chr1 manual_curation polypeptide 32052637 32056507 . - . ID=GSCOCP00028367001;Dbxref=InterPro:IPR000109,InterPro:IPR016196,InterPro:IPR018456,PFAM:PF00854,PROSITE:PS01022,PROSITE:PS01023,SUPERFAMILY:SSF103473,SwissProt:P46032,SwissProt:Q9LFB8,SwissProt:Q9M390,TAIR:AT2G02040.1,TAIR:AT3G54140.1,TAIR:AT5G01180.1,TrEMBL:B9GIV2,TrEMBL:B9HP75,TrEMBL:B9S358;Derives_from=GSCOCT00028367001;Name=Cc01_g13850;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006857,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Peptide transporter PTR5,CC_functional_completeness:complete,CC_gene:PTR5,CC_gene:PTR1,CC_gene:PTR2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028367001~ Peptide transporter PTR5~ PTR5~ complete;original_location=complement(join(1868947..1868968%2C1868699..1868750%2C1867544..1867716%2C1867238..1867455%2C1866297..1866850%2C1865098..1865935));owner=coffea | |
| 18445 chr1 manual_curation exon 32052637 32053474 . - . Parent=GSCOCT00028367001 | |
| 18446 chr1 manual_curation exon 32053836 32054389 . - . Parent=GSCOCT00028367001 | |
| 18447 chr1 manual_curation exon 32054777 32054994 . - . Parent=GSCOCT00028367001 | |
| 18448 chr1 manual_curation exon 32055083 32055255 . - . Parent=GSCOCT00028367001 | |
| 18449 chr1 manual_curation exon 32056238 32056289 . - . Parent=GSCOCT00028367001 | |
| 18450 chr1 manual_curation exon 32056486 32056507 . - . Parent=GSCOCT00028367001 | |
| 18451 chr1 manual_curation CDS 32052637 32053474 . - 2 Parent=GSCOCT00028367001 | |
| 18452 chr1 manual_curation CDS 32053836 32054389 . - 0 Parent=GSCOCT00028367001 | |
| 18453 chr1 manual_curation CDS 32054777 32054994 . - 1 Parent=GSCOCT00028367001 | |
| 18454 chr1 manual_curation CDS 32055083 32055255 . - 2 Parent=GSCOCT00028367001 | |
| 18455 chr1 manual_curation CDS 32056238 32056289 . - 1 Parent=GSCOCT00028367001 | |
| 18456 chr1 manual_curation CDS 32056486 32056507 . - 0 Parent=GSCOCT00028367001 | |
| 18457 chr1 manual_curation gene 32061750 32063955 . + . ID=GSCOCG00028368001;Name=Cc01_g13860 | |
| 18458 chr1 manual_curation mRNA 32061750 32063955 . + . ID=GSCOCT00028368001;Parent=GSCOCG00028368001;Name=Cc01_g13860 | |
| 18459 chr1 manual_curation polypeptide 32061750 32063955 . + . ID=GSCOCP00028368001;Dbxref=GENE3D:G3DSA:2.60.40.420,InterPro:IPR001117,InterPro:IPR008972,InterPro:IPR011707,PFAM:PF00394,PFAM:PF07732,SUPERFAMILY:SSF49503,SwissProt:O80434,SwissProt:Q0IQU1,SwissProt:Q1PDH6,TAIR:AT2G38080.1,TAIR:AT5G01190.1,TAIR:AT5G58910.1,TrEMBL:B9HP74,TrEMBL:B9S356,TrEMBL:I1N014;Derives_from=GSCOCT00028368001;Name=Cc01_g13860;Ontology_term=CC_evidence_code:ISS,GO:0005507,GO:0016491,GO:0055114,CC_EC_number:1.10.3.3,PRODUCT:Laccase-4,CC_functional_completeness:fragment,CC_gene:IRX12,CC_gene:LAC22,CC_gene:LAC16;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028368001~ Laccase-4~ IRX12~ fragment;original_location=join(1874211..1874297%2C1874558..1874709%2C1875087..1875343%2C1875564..1875663%2C1875803..1876284%2C1876379..1876416);owner=coffea | |
| 18460 chr1 manual_curation exon 32061750 32061836 . + . Parent=GSCOCT00028368001 | |
| 18461 chr1 manual_curation exon 32062097 32062248 . + . Parent=GSCOCT00028368001 | |
| 18462 chr1 manual_curation exon 32062626 32062882 . + . Parent=GSCOCT00028368001 | |
| 18463 chr1 manual_curation exon 32063103 32063202 . + . Parent=GSCOCT00028368001 | |
| 18464 chr1 manual_curation exon 32063342 32063823 . + . Parent=GSCOCT00028368001 | |
| 18465 chr1 manual_curation exon 32063918 32063955 . + . Parent=GSCOCT00028368001 | |
| 18466 chr1 manual_curation CDS 32061750 32061836 . + 0 Parent=GSCOCT00028368001 | |
| 18467 chr1 manual_curation CDS 32062097 32062248 . + 0 Parent=GSCOCT00028368001 | |
| 18468 chr1 manual_curation CDS 32062626 32062882 . + 2 Parent=GSCOCT00028368001 | |
| 18469 chr1 manual_curation CDS 32063103 32063202 . + 1 Parent=GSCOCT00028368001 | |
| 18470 chr1 manual_curation CDS 32063342 32063823 . + 2 Parent=GSCOCT00028368001 | |
| 18471 chr1 manual_curation CDS 32063918 32063955 . + 1 Parent=GSCOCT00028368001 | |
| 18472 chr1 manual_curation gene 32064069 32069664 . + . ID=GSCOCG00028369001;Name=Cc01_g13870 | |
| 18473 chr1 manual_curation mRNA 32064069 32069664 . + . ID=GSCOCT00028369001;Parent=GSCOCG00028369001;Name=Cc01_g13870 | |
| 18474 chr1 manual_curation polypeptide 32064069 32069664 . + . ID=GSCOCP00028369001;Dbxref=GENE3D:G3DSA:2.60.40.420,InterPro:IPR001117,InterPro:IPR002355,InterPro:IPR008972,InterPro:IPR011706,InterPro:IPR011707,InterPro:IPR017761,PFAM:PF00394,PFAM:PF07731,PFAM:PF07732,PROSITE:PS00079,PROSITE:PS00080,SUPERFAMILY:SSF49503,SwissProt:O80434,SwissProt:Q0IQU1,SwissProt:Q1PDH6,TAIR:AT2G38080.1,TAIR:AT5G01190.1,TAIR:AT5G58910.1,TIGRFAMs:TIGR03389,TrEMBL:B9S356,TrEMBL:I1MB91,TrEMBL:I1N014;Derives_from=GSCOCT00028369001;Name=Cc01_g13870;Ontology_term=CC_evidence_code:ISS,GO:0005507,GO:0008471,GO:0016491,GO:0046274,GO:0048046,GO:0055114,CC_EC_number:1.10.3.3,PRODUCT:Laccase-4,CC_functional_completeness:complete,CC_gene:IRX12,CC_gene:LAC16,CC_gene:LAC22;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028369001~ Laccase-4~ IRX12~ complete;original_location=join(1876530..1876719%2C1877135..1877196%2C1877450..1877526%2C1878200..1878247%2C1878587..1878729%2C1879153..1879274%2C1879708..1879859%2C1880037..1880281%2C1880532..1880596%2C1880654..1880768%2C1880879..1881500%2C1881537..1881799%2C1881995..1882125);owner=coffea | |
| 18475 chr1 manual_curation exon 32064069 32064258 . + . Parent=GSCOCT00028369001 | |
| 18476 chr1 manual_curation exon 32064674 32064735 . + . Parent=GSCOCT00028369001 | |
| 18477 chr1 manual_curation exon 32064989 32065065 . + . Parent=GSCOCT00028369001 | |
| 18478 chr1 manual_curation exon 32065739 32065786 . + . Parent=GSCOCT00028369001 | |
| 18479 chr1 manual_curation exon 32066126 32066268 . + . Parent=GSCOCT00028369001 | |
| 18480 chr1 manual_curation exon 32066692 32066813 . + . Parent=GSCOCT00028369001 | |
| 18481 chr1 manual_curation exon 32067247 32067398 . + . Parent=GSCOCT00028369001 | |
| 18482 chr1 manual_curation exon 32067576 32067820 . + . Parent=GSCOCT00028369001 | |
| 18483 chr1 manual_curation exon 32068071 32068135 . + . Parent=GSCOCT00028369001 | |
| 18484 chr1 manual_curation exon 32068193 32068307 . + . Parent=GSCOCT00028369001 | |
| 18485 chr1 manual_curation exon 32068418 32069039 . + . Parent=GSCOCT00028369001 | |
| 18486 chr1 manual_curation exon 32069076 32069338 . + . Parent=GSCOCT00028369001 | |
| 18487 chr1 manual_curation exon 32069534 32069664 . + . Parent=GSCOCT00028369001 | |
| 18488 chr1 manual_curation CDS 32064069 32064258 . + 0 Parent=GSCOCT00028369001 | |
| 18489 chr1 manual_curation CDS 32064674 32064735 . + 1 Parent=GSCOCT00028369001 | |
| 18490 chr1 manual_curation CDS 32064989 32065065 . + 0 Parent=GSCOCT00028369001 | |
| 18491 chr1 manual_curation CDS 32065739 32065786 . + 2 Parent=GSCOCT00028369001 | |
| 18492 chr1 manual_curation CDS 32066126 32066268 . + 2 Parent=GSCOCT00028369001 | |
| 18493 chr1 manual_curation CDS 32066692 32066813 . + 1 Parent=GSCOCT00028369001 | |
| 18494 chr1 manual_curation CDS 32067247 32067398 . + 0 Parent=GSCOCT00028369001 | |
| 18495 chr1 manual_curation CDS 32067576 32067820 . + 2 Parent=GSCOCT00028369001 | |
| 18496 chr1 manual_curation CDS 32068071 32068135 . + 1 Parent=GSCOCT00028369001 | |
| 18497 chr1 manual_curation CDS 32068193 32068307 . + 0 Parent=GSCOCT00028369001 | |
| 18498 chr1 manual_curation CDS 32068418 32069039 . + 1 Parent=GSCOCT00028369001 | |
| 18499 chr1 manual_curation CDS 32069076 32069338 . + 2 Parent=GSCOCT00028369001 | |
| 18500 chr1 manual_curation CDS 32069534 32069664 . + 1 Parent=GSCOCT00028369001 | |
| 18501 chr1 manual_curation gene 32083382 32086176 . + . ID=GSCOCG00028370001;Name=Cc01_g13880 | |
| 18502 chr1 manual_curation mRNA 32083382 32086176 . + . ID=GSCOCT00028370001;Parent=GSCOCG00028370001;Name=Cc01_g13880 | |
| 18503 chr1 manual_curation polypeptide 32084213 32085354 . + . ID=GSCOCP00028370001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001005,InterPro:IPR006447,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR014778,InterPro:IPR015609,InterPro:IPR017884,InterPro:IPR017930,PANTHER:PTHR11821,PFAM:PF00249,PROFILE:PS51293,PROFILE:PS51294,SMART:SM00717,SUPERFAMILY:SSF46689,SwissProt:Q2V9B0,SwissProt:Q869R9,TAIR:AT2G38090.1,TAIR:AT5G01200.1,TAIR:AT5G58900.1,TIGRFAMs:TIGR01557,TrEMBL:A5BKF3,TrEMBL:B9GIV0,TrEMBL:B9HP73;Derives_from=GSCOCT00028370001;Name=Cc01_g13880;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Homeodomain-like transcriptional regulator,CC_functional_completeness:complete,CC_gene:mybJ;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028370001~ Homeodomain-like transcriptional regulator~ mybJ~ complete;original_location=join(1896674..1897086%2C1897314..1897557%2C1897612..1897815);owner=coffea | |
| 18504 chr1 manual_curation exon 32083382 32084625 . + . Parent=GSCOCT00028370001 | |
| 18505 chr1 manual_curation exon 32084853 32085096 . + . Parent=GSCOCT00028370001 | |
| 18506 chr1 manual_curation exon 32085151 32086176 . + . Parent=GSCOCT00028370001 | |
| 18507 chr1 manual_curation CDS 32084213 32084625 . + 0 Parent=GSCOCT00028370001 | |
| 18508 chr1 manual_curation CDS 32084853 32085096 . + 2 Parent=GSCOCT00028370001 | |
| 18509 chr1 manual_curation CDS 32085151 32085354 . + 0 Parent=GSCOCT00028370001 | |
| 18510 chr1 manual_curation gene 32087954 32093247 . - . ID=GSCOCG00028371001;Name=Cc01_g13890 | |
| 18511 chr1 manual_curation mRNA 32087954 32093247 . - . ID=GSCOCT00028371001;Parent=GSCOCG00028371001;Name=Cc01_g13890 | |
| 18512 chr1 manual_curation polypeptide 32088413 32093111 . - . ID=GSCOCP00028371001;Dbxref=GENE3D:G3DSA:3.20.20.300,InterPro:IPR001764,InterPro:IPR002772,InterPro:IPR017853,InterPro:IPR019800,PFAM:PF00933,PFAM:PF01915,PRINTS:PR00133,PROSITE:PS00775,SUPERFAMILY:SSF51445,SUPERFAMILY:SSF52279,SwissProt:P33363,SwissProt:Q23892,SwissProt:Q56078,TAIR:AT3G47000.1,TAIR:AT3G47010.1,TAIR:AT3G47040.2,TrEMBL:A5BKF4,TrEMBL:B9SHX7,TrEMBL:F6GUU3;Derives_from=GSCOCT00028371001;Name=Cc01_g13890;Ontology_term=CC_evidence_code:ISS,GO:0005975,CC_EC_number:3.2.1.21,PRODUCT:Putative Lysosomal beta glucosidase,CC_functional_completeness:fragment,CC_gene:gluA,CC_gene:bglX;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028371001~ Putative Lysosomal beta glucosidase~ gluA~ fragment;original_location=complement(join(1905422..1905572%2C1905105..1905309%2C1904884..1904974%2C1903772..1903917%2C1903138..1903381%2C1902701..1902805%2C1902434..1902616%2C1901688..1901889%2C1900874..1901361));owner=coffea | |
| 18513 chr1 manual_curation exon 32087954 32088900 . - . Parent=GSCOCT00028371001 | |
| 18514 chr1 manual_curation exon 32089227 32089428 . - . Parent=GSCOCT00028371001 | |
| 18515 chr1 manual_curation exon 32089973 32090155 . - . Parent=GSCOCT00028371001 | |
| 18516 chr1 manual_curation exon 32090240 32090344 . - . Parent=GSCOCT00028371001 | |
| 18517 chr1 manual_curation exon 32090677 32090920 . - . Parent=GSCOCT00028371001 | |
| 18518 chr1 manual_curation exon 32091311 32091456 . - . Parent=GSCOCT00028371001 | |
| 18519 chr1 manual_curation exon 32092423 32092513 . - . Parent=GSCOCT00028371001 | |
| 18520 chr1 manual_curation exon 32092644 32092848 . - . Parent=GSCOCT00028371001 | |
| 18521 chr1 manual_curation exon 32092961 32093247 . - . Parent=GSCOCT00028371001 | |
| 18522 chr1 manual_curation CDS 32088413 32088900 . - 1 Parent=GSCOCT00028371001 | |
| 18523 chr1 manual_curation CDS 32089227 32089428 . - 0 Parent=GSCOCT00028371001 | |
| 18524 chr1 manual_curation CDS 32089973 32090155 . - 0 Parent=GSCOCT00028371001 | |
| 18525 chr1 manual_curation CDS 32090240 32090344 . - 0 Parent=GSCOCT00028371001 | |
| 18526 chr1 manual_curation CDS 32090677 32090920 . - 2 Parent=GSCOCT00028371001 | |
| 18527 chr1 manual_curation CDS 32091311 32091456 . - 0 Parent=GSCOCT00028371001 | |
| 18528 chr1 manual_curation CDS 32092423 32092513 . - 2 Parent=GSCOCT00028371001 | |
| 18529 chr1 manual_curation CDS 32092644 32092848 . - 1 Parent=GSCOCT00028371001 | |
| 18530 chr1 manual_curation CDS 32092961 32093111 . - 0 Parent=GSCOCT00028371001 | |
| 18531 chr1 manual_curation gene 32095391 32100368 . - . ID=GSCOCG00028372001;Name=Cc01_g13900 | |
| 18532 chr1 manual_curation mRNA 32095391 32100368 . - . ID=GSCOCT00028372001;Parent=GSCOCG00028372001;Name=Cc01_g13900 | |
| 18533 chr1 manual_curation polypeptide 32095770 32100239 . - . ID=GSCOCP00028372001;Dbxref=GENE3D:G3DSA:3.20.20.300,InterPro:IPR001764,InterPro:IPR002772,InterPro:IPR017853,PFAM:PF00933,PFAM:PF01915,PRINTS:PR00133,SUPERFAMILY:SSF51445,SUPERFAMILY:SSF52279,SwissProt:P33363,SwissProt:Q23892,SwissProt:Q56078,TAIR:AT3G47000.1,TAIR:AT3G47010.1,TAIR:AT3G47050.1,TrEMBL:A5BKF4,TrEMBL:B9SHX7,TrEMBL:F6GUU3;Derives_from=GSCOCT00028372001;Name=Cc01_g13900;Ontology_term=CC_evidence_code:ISS,GO:0005975,CC_EC_number:3.2.1.21,PRODUCT:Putative Lysosomal beta glucosidase,CC_functional_completeness:fragment,CC_gene:gluA,CC_gene:bglX;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028372001~ Putative Lysosomal beta glucosidase~ gluA~ fragment;original_location=complement(join(1912550..1912700%2C1912248..1912452%2C1912046..1912136%2C1911620..1911765%2C1910975..1911218%2C1910608..1910712%2C1910346..1910528%2C1909085..1909286%2C1908231..1908718));owner=coffea | |
| 18534 chr1 manual_curation exon 32095391 32096257 . - . Parent=GSCOCT00028372001 | |
| 18535 chr1 manual_curation exon 32096624 32096825 . - . Parent=GSCOCT00028372001 | |
| 18536 chr1 manual_curation exon 32097885 32098067 . - . Parent=GSCOCT00028372001 | |
| 18537 chr1 manual_curation exon 32098147 32098251 . - . Parent=GSCOCT00028372001 | |
| 18538 chr1 manual_curation exon 32098514 32098757 . - . Parent=GSCOCT00028372001 | |
| 18539 chr1 manual_curation exon 32099159 32099304 . - . Parent=GSCOCT00028372001 | |
| 18540 chr1 manual_curation exon 32099585 32099675 . - . Parent=GSCOCT00028372001 | |
| 18541 chr1 manual_curation exon 32099787 32099991 . - . Parent=GSCOCT00028372001 | |
| 18542 chr1 manual_curation exon 32100089 32100368 . - . Parent=GSCOCT00028372001 | |
| 18543 chr1 manual_curation CDS 32095770 32096257 . - 1 Parent=GSCOCT00028372001 | |
| 18544 chr1 manual_curation CDS 32096624 32096825 . - 0 Parent=GSCOCT00028372001 | |
| 18545 chr1 manual_curation CDS 32097885 32098067 . - 0 Parent=GSCOCT00028372001 | |
| 18546 chr1 manual_curation CDS 32098147 32098251 . - 0 Parent=GSCOCT00028372001 | |
| 18547 chr1 manual_curation CDS 32098514 32098757 . - 2 Parent=GSCOCT00028372001 | |
| 18548 chr1 manual_curation CDS 32099159 32099304 . - 0 Parent=GSCOCT00028372001 | |
| 18549 chr1 manual_curation CDS 32099585 32099675 . - 2 Parent=GSCOCT00028372001 | |
| 18550 chr1 manual_curation CDS 32099787 32099991 . - 1 Parent=GSCOCT00028372001 | |
| 18551 chr1 manual_curation CDS 32100089 32100239 . - 0 Parent=GSCOCT00028372001 | |
| 18552 chr1 manual_curation gene 32104037 32104186 . - . ID=GSCOCG00028373001;Name=Cc01_g13910 | |
| 18553 chr1 manual_curation mRNA 32104037 32104186 . - . ID=GSCOCT00028373001;Parent=GSCOCG00028373001;Name=Cc01_g13910 | |
| 18554 chr1 manual_curation polypeptide 32104037 32104186 . - . ID=GSCOCP00028373001;Dbxref=TAIR:AT1G07340.1;Derives_from=GSCOCT00028373001;Name=Cc01_g13910;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:sugar transporter 2,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028373001~ sugar transporter 2~ unknown_gene~ fragment;original_location=complement(1916498..1916647);owner=coffea | |
| 18555 chr1 manual_curation exon 32104037 32104186 . - . Parent=GSCOCT00028373001 | |
| 18556 chr1 manual_curation CDS 32104037 32104186 . - 0 Parent=GSCOCT00028373001 | |
| 18557 chr1 manual_curation gene 32104333 32109706 . + . ID=GSCOCG00028374001;Name=Cc01_g13920 | |
| 18558 chr1 manual_curation mRNA 32104333 32109706 . + . ID=GSCOCT00028374001;Parent=GSCOCG00028374001;Name=Cc01_g13920 | |
| 18559 chr1 manual_curation polypeptide 32104333 32109503 . + . ID=GSCOCP00028374001;Derives_from=GSCOCT00028374001;Name=Cc01_g13920;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028374001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(1916794..1917114%2C1917230..1917450%2C1919689..1919775%2C1921353..1921476%2C1921947..1921964);owner=coffea | |
| 18560 chr1 manual_curation exon 32104333 32104653 . + . Parent=GSCOCT00028374001 | |
| 18561 chr1 manual_curation exon 32104769 32104989 . + . Parent=GSCOCT00028374001 | |
| 18562 chr1 manual_curation exon 32107228 32107314 . + . Parent=GSCOCT00028374001 | |
| 18563 chr1 manual_curation exon 32108892 32109015 . + . Parent=GSCOCT00028374001 | |
| 18564 chr1 manual_curation exon 32109486 32109706 . + . Parent=GSCOCT00028374001 | |
| 18565 chr1 manual_curation CDS 32104333 32104653 . + 0 Parent=GSCOCT00028374001 | |
| 18566 chr1 manual_curation CDS 32104769 32104989 . + 0 Parent=GSCOCT00028374001 | |
| 18567 chr1 manual_curation CDS 32107228 32107314 . + 2 Parent=GSCOCT00028374001 | |
| 18568 chr1 manual_curation CDS 32108892 32109015 . + 2 Parent=GSCOCT00028374001 | |
| 18569 chr1 manual_curation CDS 32109486 32109503 . + 0 Parent=GSCOCT00028374001 | |
| 18570 chr1 manual_curation gene 32121467 32125303 . - . ID=GSCOCG00028377001;Name=Cc01_g13930 | |
| 18571 chr1 manual_curation mRNA 32121467 32125303 . - . ID=GSCOCT00028377001;Parent=GSCOCG00028377001;Name=Cc01_g13930 | |
| 18572 chr1 manual_curation polypeptide 32121467 32125303 . - . ID=GSCOCP00028377001;Dbxref=TAIR:AT2G29620.1,TAIR:AT5G17910.1,TAIR:AT5G58880.1,TrEMBL:A5BKF5,TrEMBL:B9SHY0,TrEMBL:D7LLB2;Derives_from=GSCOCT00028377001;Name=Cc01_g13930;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028377001~ Putative unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G07330.1)%3B Has 887 Blast hits to 750 proteins in 151 species: Archae - 2%3B Bacteria - 63%3B Metazoa - 270%3B Fungi - 51%3B Plants - 111%3B Viruses - 6%3B Other Eukaryotes - 384 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(1936561..1937764%2C1936345..1936425%2C1935628..1936296%2C1933928..1934385));owner=coffea | |
| 18573 chr1 manual_curation exon 32121467 32121924 . - . Parent=GSCOCT00028377001 | |
| 18574 chr1 manual_curation exon 32123167 32123835 . - . Parent=GSCOCT00028377001 | |
| 18575 chr1 manual_curation exon 32123884 32123964 . - . Parent=GSCOCT00028377001 | |
| 18576 chr1 manual_curation exon 32124100 32125303 . - . Parent=GSCOCT00028377001 | |
| 18577 chr1 manual_curation CDS 32121467 32121924 . - 1 Parent=GSCOCT00028377001 | |
| 18578 chr1 manual_curation CDS 32123167 32123835 . - 1 Parent=GSCOCT00028377001 | |
| 18579 chr1 manual_curation CDS 32123884 32123964 . - 1 Parent=GSCOCT00028377001 | |
| 18580 chr1 manual_curation CDS 32124100 32125303 . - 0 Parent=GSCOCT00028377001 | |
| 18581 chr1 manual_curation gene 32128753 32134604 . + . ID=GSCOCG00028378001;Name=Cc01_g13940 | |
| 18582 chr1 manual_curation mRNA 32128753 32134604 . + . ID=GSCOCT00028378001;Parent=GSCOCG00028378001;Name=Cc01_g13940 | |
| 18583 chr1 manual_curation polypeptide 32128979 32134015 . + . ID=GSCOCP00028378001;Dbxref=InterPro:IPR000642,InterPro:IPR003593,InterPro:IPR003959,InterPro:IPR003960,InterPro:IPR005936,InterPro:IPR011546,PFAM:PF00004,PFAM:PF01434,PFAM:PF06480,PROSITE:PS00674,SMART:SM00382,SwissProt:Q6H6R9,SwissProt:Q9FIM2,SwissProt:Q9SD67,TAIR:AT1G50250.1,TAIR:AT3G47060.1,TAIR:AT5G58870.1,TIGRFAMs:TIGR01241,TrEMBL:B9SHY4,TrEMBL:F6GUU2,TrEMBL:I1JHB5;Derives_from=GSCOCT00028378001;Name=Cc01_g13940;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0004222,GO:0005524,GO:0006508,GO:0008270,GO:0016020,GO:0016021,GO:0017111,GO:0030163,CC_EC_number:3.6.4.3,CC_EC_number:3.6.4.3,PRODUCT:ATP-dependent zinc metalloprotease FTSH 9%2C chloroplastic,CC_functional_completeness:complete,CC_gene:FTSH9,CC_gene:FTSH7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028378001~ ATP-dependent zinc metalloprotease FTSH 9%2C chloroplastic~ FTSH9~ complete;original_location=join(1941440..1942312%2C1942944..1943009%2C1943098..1943232%2C1943345..1943410%2C1943828..1944013%2C1944147..1944233%2C1944319..1944432%2C1944549..1944673%2C1944787..1944895%2C1945172..1945297%2C1945441..1945761%2C1945846..1945969%2C1946349..1946476);owner=coffea | |
| 18584 chr1 manual_curation exon 32128753 32129851 . + . Parent=GSCOCT00028378001 | |
| 18585 chr1 manual_curation exon 32130483 32130548 . + . Parent=GSCOCT00028378001 | |
| 18586 chr1 manual_curation exon 32130637 32130771 . + . Parent=GSCOCT00028378001 | |
| 18587 chr1 manual_curation exon 32130884 32130949 . + . Parent=GSCOCT00028378001 | |
| 18588 chr1 manual_curation exon 32131367 32131552 . + . Parent=GSCOCT00028378001 | |
| 18589 chr1 manual_curation exon 32131686 32131772 . + . Parent=GSCOCT00028378001 | |
| 18590 chr1 manual_curation exon 32131858 32131971 . + . Parent=GSCOCT00028378001 | |
| 18591 chr1 manual_curation exon 32132088 32132212 . + . Parent=GSCOCT00028378001 | |
| 18592 chr1 manual_curation exon 32132326 32132434 . + . Parent=GSCOCT00028378001 | |
| 18593 chr1 manual_curation exon 32132711 32132836 . + . Parent=GSCOCT00028378001 | |
| 18594 chr1 manual_curation exon 32132980 32133300 . + . Parent=GSCOCT00028378001 | |
| 18595 chr1 manual_curation exon 32133385 32133508 . + . Parent=GSCOCT00028378001 | |
| 18596 chr1 manual_curation exon 32133888 32134604 . + . Parent=GSCOCT00028378001 | |
| 18597 chr1 manual_curation CDS 32128979 32129851 . + 0 Parent=GSCOCT00028378001 | |
| 18598 chr1 manual_curation CDS 32130483 32130548 . + 0 Parent=GSCOCT00028378001 | |
| 18599 chr1 manual_curation CDS 32130637 32130771 . + 0 Parent=GSCOCT00028378001 | |
| 18600 chr1 manual_curation CDS 32130884 32130949 . + 0 Parent=GSCOCT00028378001 | |
| 18601 chr1 manual_curation CDS 32131367 32131552 . + 0 Parent=GSCOCT00028378001 | |
| 18602 chr1 manual_curation CDS 32131686 32131772 . + 0 Parent=GSCOCT00028378001 | |
| 18603 chr1 manual_curation CDS 32131858 32131971 . + 0 Parent=GSCOCT00028378001 | |
| 18604 chr1 manual_curation CDS 32132088 32132212 . + 0 Parent=GSCOCT00028378001 | |
| 18605 chr1 manual_curation CDS 32132326 32132434 . + 2 Parent=GSCOCT00028378001 | |
| 18606 chr1 manual_curation CDS 32132711 32132836 . + 0 Parent=GSCOCT00028378001 | |
| 18607 chr1 manual_curation CDS 32132980 32133300 . + 0 Parent=GSCOCT00028378001 | |
| 18608 chr1 manual_curation CDS 32133385 32133508 . + 0 Parent=GSCOCT00028378001 | |
| 18609 chr1 manual_curation CDS 32133888 32134015 . + 1 Parent=GSCOCT00028378001 | |
| 18610 chr1 manual_curation gene 32135773 32140028 . + . ID=GSCOCG00028379001;Name=Cc01_g13950 | |
| 18611 chr1 manual_curation mRNA 32135773 32140028 . + . ID=GSCOCT00028379001;Parent=GSCOCG00028379001;Name=Cc01_g13950 | |
| 18612 chr1 manual_curation polypeptide 32136341 32139043 . + . ID=GSCOCP00028379001;Dbxref=HAMAP:MF_00089,InterPro:IPR002817,PFAM:PF01964,SwissProt:A7Z2P5,SwissProt:O82392,SwissProt:Q9KBJ4,TAIR:AT2G29630.2,TIGRFAMs:TIGR00190,TrEMBL:B9TU32,TrEMBL:F6GUU1,TrEMBL:I1N019;Derives_from=GSCOCT00028379001;Name=Cc01_g13950;Ontology_term=CC_evidence_code:ISS,GO:0009228,CC_EC_number:missing_EC_number,PRODUCT:Phosphomethylpyrimidine synthase%2C chloroplastic,CC_functional_completeness:complete,CC_gene:THIC,CC_gene:thiC;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028379001~ Phosphomethylpyrimidine synthase%2C chloroplastic~ THIC~ complete;original_location=join(1948802..1949109%2C1949297..1949424%2C1949606..1950432%2C1950824..1951504);owner=coffea | |
| 18613 chr1 manual_curation exon 32135773 32135860 . + . Parent=GSCOCT00028379001 | |
| 18614 chr1 manual_curation exon 32139462 32139565 . + . Parent=GSCOCT00028379001 | |
| 18615 chr1 manual_curation exon 32139729 32140028 . + . Parent=GSCOCT00028379001 | |
| 18616 chr1 manual_curation exon 32136328 32136648 . + . Parent=GSCOCT00028379001 | |
| 18617 chr1 manual_curation exon 32136836 32136963 . + . Parent=GSCOCT00028379001 | |
| 18618 chr1 manual_curation exon 32137145 32137971 . + . Parent=GSCOCT00028379001 | |
| 18619 chr1 manual_curation exon 32138363 32139045 . + . Parent=GSCOCT00028379001 | |
| 18620 chr1 manual_curation CDS 32136341 32136648 . + 0 Parent=GSCOCT00028379001 | |
| 18621 chr1 manual_curation CDS 32136836 32136963 . + 2 Parent=GSCOCT00028379001 | |
| 18622 chr1 manual_curation CDS 32137145 32137971 . + 1 Parent=GSCOCT00028379001 | |
| 18623 chr1 manual_curation CDS 32138363 32139043 . + 0 Parent=GSCOCT00028379001 | |
| 18624 chr1 manual_curation gene 32141490 32142891 . - . ID=GSCOCG00028381001;Name=Cc01_g13960 | |
| 18625 chr1 manual_curation mRNA 32141490 32142891 . - . ID=GSCOCT00028381001;Parent=GSCOCG00028381001;Name=Cc01_g13960 | |
| 18626 chr1 manual_curation polypeptide 32141526 32142891 . - . ID=GSCOCP00028381001;Dbxref=InterPro:IPR002136,InterPro:IPR013005,InterPro:IPR015498,PANTHER:PTHR10746,PANTHER:PTHR10746:SF2,PFAM:PF00573,SUPERFAMILY:SSF52166,SwissProt:O49937,SwissProt:O50061,SwissProt:O80361,TAIR:AT1G07320.1,TAIR:AT2G20060.1,TrEMBL:A5B3D4,TrEMBL:D7KH11,TrEMBL:F6GUU0;Derives_from=GSCOCT00028381001;Name=Cc01_g13960;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,GO:0019843,CC_EC_number:missing_EC_number,PRODUCT:Putative Ribosomal protein L4/L1e,CC_functional_completeness:complete,CC_gene:RPL4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028381001~ Putative Ribosomal protein L4/L1e~ RPL4~ complete;original_location=complement(join(1954485..1955352%2C1953987..1954018));owner=coffea | |
| 18627 chr1 manual_curation exon 32141490 32141557 . - . Parent=GSCOCT00028381001 | |
| 18628 chr1 manual_curation exon 32142024 32142891 . - . Parent=GSCOCT00028381001 | |
| 18629 chr1 manual_curation CDS 32141526 32141557 . - 1 Parent=GSCOCT00028381001 | |
| 18630 chr1 manual_curation CDS 32142024 32142891 . - 0 Parent=GSCOCT00028381001 | |
| 18631 chr1 manual_curation gene 32145059 32146535 . + . ID=GSCOCG00028382001;Name=Cc01_g13970 | |
| 18632 chr1 manual_curation mRNA 32145059 32146535 . + . ID=GSCOCT00028382001;Parent=GSCOCG00028382001;Name=Cc01_g13970 | |
| 18633 chr1 manual_curation polypeptide 32145266 32146140 . + . ID=GSCOCP00028382001;Dbxref=InterPro:IPR006155,PFAM:PF02099,PROFILE:PS50957,SwissProt:O82391,SwissProt:Q8TAC2,SwissProt:Q9CR30,TAIR:AT2G29640.1,TrEMBL:D7LLB5,TrEMBL:D7SK18,TrEMBL:G7K6B3;Derives_from=GSCOCT00028382001;Name=Cc01_g13970;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Josephin-like protein,CC_functional_completeness:fragment,CC_gene:At2g29640,CC_gene:Josd2,CC_gene:JOSD2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028382001~ Josephin-like protein~ At2g29640~ fragment;original_location=join(1957727..1957810%2C1958137..1958601);owner=coffea | |
| 18634 chr1 manual_curation exon 32145059 32145349 . + . Parent=GSCOCT00028382001 | |
| 18635 chr1 manual_curation exon 32145676 32146535 . + . Parent=GSCOCT00028382001 | |
| 18636 chr1 manual_curation CDS 32145266 32145349 . + 0 Parent=GSCOCT00028382001 | |
| 18637 chr1 manual_curation CDS 32145676 32146140 . + 0 Parent=GSCOCT00028382001 | |
| 18638 chr1 manual_curation gene 32146665 32149683 . + . ID=GSCOCG00028383001;Name=Cc01_g13980 | |
| 18639 chr1 manual_curation mRNA 32146665 32149683 . + . ID=GSCOCT00028383001;Parent=GSCOCG00028383001;Name=Cc01_g13980 | |
| 18640 chr1 manual_curation polypeptide 32146665 32149305 . + . ID=GSCOCP00028383001;Dbxref=TAIR:AT1G07300.1,TrEMBL:B9GIU2,TrEMBL:B9HP65;Derives_from=GSCOCT00028383001;Name=Cc01_g13980;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028383001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(1959126..1959162%2C1961342..1961766);owner=coffea | |
| 18641 chr1 manual_curation exon 32146665 32146701 . + . Parent=GSCOCT00028383001 | |
| 18642 chr1 manual_curation exon 32148881 32149683 . + . Parent=GSCOCT00028383001 | |
| 18643 chr1 manual_curation CDS 32146665 32146701 . + 0 Parent=GSCOCT00028383001 | |
| 18644 chr1 manual_curation CDS 32148881 32149305 . + 1 Parent=GSCOCT00028383001 | |
| 18645 chr1 manual_curation gene 32152525 32154906 . + . ID=GSCOCG00028384001;Name=Cc01_g13990 | |
| 18646 chr1 manual_curation mRNA 32152525 32154906 . + . ID=GSCOCT00028384001;Parent=GSCOCG00028384001;Name=Cc01_g13990 | |
| 18647 chr1 manual_curation polypeptide 32153725 32154090 . + . ID=GSCOCP00028384001;Derives_from=GSCOCT00028384001;Name=Cc01_g13990;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028384001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1966186..1966551;owner=coffea | |
| 18648 chr1 manual_curation exon 32152525 32154906 . + . Parent=GSCOCT00028384001 | |
| 18649 chr1 manual_curation CDS 32153725 32154090 . + 0 Parent=GSCOCT00028384001 | |
| 18650 chr1 manual_curation gene 32155103 32160446 . - . ID=GSCOCG00028385001;Name=Cc01_g14000 | |
| 18651 chr1 manual_curation mRNA 32155103 32160446 . - . ID=GSCOCT00028385001;Parent=GSCOCG00028385001;Name=Cc01_g14000 | |
| 18652 chr1 manual_curation polypeptide 32155103 32160242 . - . ID=GSCOCP00028385001;Dbxref=InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,PFAM:PF07690,PROFILE:PS50850,SUPERFAMILY:SSF103473,SwissProt:O82390,SwissProt:Q8GX78,SwissProt:Q9SDI4,TAIR:AT2G29650.1,TAIR:AT2G38060.1,TAIR:AT4G00370.1,TrEMBL:B9HP62,TrEMBL:B9SHZ0,TrEMBL:D7SK13;Derives_from=GSCOCT00028385001;Name=Cc01_g14000;Ontology_term=CC_evidence_code:ISS,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Sodium-dependent phosphate transport protein 1%2C chloroplastic,CC_functional_completeness:complete,CC_gene:ANTR1,CC_gene:PHT4%3B1,CC_gene:ANTR2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028385001~ Sodium-dependent phosphate transport protein 1%2C chloroplastic~ ANTR1~ complete;original_location=complement(join(1972245..1972703%2C1971408..1971515%2C1971047..1971202%2C1970602..1970817%2C1970253..1970462%2C1969467..1969604%2C1969032..1969133%2C1968614..1968679%2C1968129..1968213%2C1967564..1967661));owner=coffea | |
| 18653 chr1 manual_curation exon 32155103 32155200 . - . Parent=GSCOCT00028385001 | |
| 18654 chr1 manual_curation exon 32155668 32155752 . - . Parent=GSCOCT00028385001 | |
| 18655 chr1 manual_curation exon 32156153 32156218 . - . Parent=GSCOCT00028385001 | |
| 18656 chr1 manual_curation exon 32156571 32156672 . - . Parent=GSCOCT00028385001 | |
| 18657 chr1 manual_curation exon 32157006 32157143 . - . Parent=GSCOCT00028385001 | |
| 18658 chr1 manual_curation exon 32157792 32158001 . - . Parent=GSCOCT00028385001 | |
| 18659 chr1 manual_curation exon 32158141 32158356 . - . Parent=GSCOCT00028385001 | |
| 18660 chr1 manual_curation exon 32158586 32158741 . - . Parent=GSCOCT00028385001 | |
| 18661 chr1 manual_curation exon 32158947 32159054 . - . Parent=GSCOCT00028385001 | |
| 18662 chr1 manual_curation exon 32159784 32160446 . - . Parent=GSCOCT00028385001 | |
| 18663 chr1 manual_curation CDS 32155103 32155200 . - 1 Parent=GSCOCT00028385001 | |
| 18664 chr1 manual_curation CDS 32155668 32155752 . - 0 Parent=GSCOCT00028385001 | |
| 18665 chr1 manual_curation CDS 32156153 32156218 . - 0 Parent=GSCOCT00028385001 | |
| 18666 chr1 manual_curation CDS 32156571 32156672 . - 0 Parent=GSCOCT00028385001 | |
| 18667 chr1 manual_curation CDS 32157006 32157143 . - 0 Parent=GSCOCT00028385001 | |
| 18668 chr1 manual_curation CDS 32157792 32158001 . - 0 Parent=GSCOCT00028385001 | |
| 18669 chr1 manual_curation CDS 32158141 32158356 . - 0 Parent=GSCOCT00028385001 | |
| 18670 chr1 manual_curation CDS 32158586 32158741 . - 0 Parent=GSCOCT00028385001 | |
| 18671 chr1 manual_curation CDS 32158947 32159054 . - 0 Parent=GSCOCT00028385001 | |
| 18672 chr1 manual_curation CDS 32159784 32160242 . - 0 Parent=GSCOCT00028385001 | |
| 18673 chr1 manual_curation gene 32166773 32168677 . + . ID=GSCOCG00028386001;Name=Cc01_g14010 | |
| 18674 chr1 manual_curation mRNA 32166773 32168677 . + . ID=GSCOCT00028386001;Parent=GSCOCG00028386001;Name=Cc01_g14010 | |
| 18675 chr1 manual_curation polypeptide 32167089 32168243 . + . ID=GSCOCP00028386001;Dbxref=InterPro:IPR007087,InterPro:IPR015880,PFAM:PF00096,PROFILE:PS50157,PROSITE:PS00028,SMART:SM00355,TAIR:AT2G29660.1,TAIR:AT4G27240.1,TAIR:AT5G54630.1,TrEMBL:B9HP60,TrEMBL:B9SHZ1,TrEMBL:D7SK11;Derives_from=GSCOCT00028386001;Name=Cc01_g14010;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:zinc finger (C2H2 type) family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028386001~ zinc finger (C2H2 type) family protein~ unknown_gene~ complete;original_location=1979550..1980704;owner=coffea | |
| 18676 chr1 manual_curation exon 32166773 32168677 . + . Parent=GSCOCT00028386001 | |
| 18677 chr1 manual_curation CDS 32167089 32168243 . + 0 Parent=GSCOCT00028386001 | |
| 18678 chr1 manual_curation gene 32172450 32176251 . + . ID=GSCOCG00028387001;Name=Cc01_g14020 | |
| 18679 chr1 manual_curation mRNA 32172450 32176251 . + . ID=GSCOCT00028387001;Parent=GSCOCG00028387001;Name=Cc01_g14020 | |
| 18680 chr1 manual_curation polypeptide 32172868 32176251 . + . ID=GSCOCP00028387001;Dbxref=InterPro:IPR004853,PFAM:PF03151,SwissProt:Q2UTL1,SwissProt:Q84L09,SwissProt:Q941R4,TAIR:AT1G07290.1,TAIR:AT2G13650.1,TAIR:AT4G32272.2,TrEMBL:A5AYV7,TrEMBL:B9HP59,TrEMBL:D7SK08;Derives_from=GSCOCT00028387001;Name=Cc01_g14020;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:GDP-mannose transporter GONST2,CC_functional_completeness:complete,CC_gene:GONST2,CC_gene:GONST1,CC_gene:gmt1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028387001~ GDP-mannose transporter GONST2~ GONST2~ complete;original_location=join(1985329..1985528%2C1986162..1986372%2C1986614..1986753%2C1986888..1987017%2C1987732..1987830%2C1987945..1988099%2C1988232..1988348%2C1988485..1988582%2C1988669..1988712);owner=coffea | |
| 18681 chr1 manual_curation exon 32172450 32172580 . + . Parent=GSCOCT00028387001 | |
| 18682 chr1 manual_curation exon 32172858 32173067 . + . Parent=GSCOCT00028387001 | |
| 18683 chr1 manual_curation exon 32173701 32173911 . + . Parent=GSCOCT00028387001 | |
| 18684 chr1 manual_curation exon 32174153 32174292 . + . Parent=GSCOCT00028387001 | |
| 18685 chr1 manual_curation exon 32174427 32174556 . + . Parent=GSCOCT00028387001 | |
| 18686 chr1 manual_curation exon 32175271 32175369 . + . Parent=GSCOCT00028387001 | |
| 18687 chr1 manual_curation exon 32175484 32175638 . + . Parent=GSCOCT00028387001 | |
| 18688 chr1 manual_curation exon 32175771 32175887 . + . Parent=GSCOCT00028387001 | |
| 18689 chr1 manual_curation exon 32176024 32176121 . + . Parent=GSCOCT00028387001 | |
| 18690 chr1 manual_curation exon 32176208 32176251 . + . Parent=GSCOCT00028387001 | |
| 18691 chr1 manual_curation CDS 32172868 32173067 . + 0 Parent=GSCOCT00028387001 | |
| 18692 chr1 manual_curation CDS 32173701 32173911 . + 2 Parent=GSCOCT00028387001 | |
| 18693 chr1 manual_curation CDS 32174153 32174292 . + 0 Parent=GSCOCT00028387001 | |
| 18694 chr1 manual_curation CDS 32174427 32174556 . + 2 Parent=GSCOCT00028387001 | |
| 18695 chr1 manual_curation CDS 32175271 32175369 . + 0 Parent=GSCOCT00028387001 | |
| 18696 chr1 manual_curation CDS 32175484 32175638 . + 0 Parent=GSCOCT00028387001 | |
| 18697 chr1 manual_curation CDS 32175771 32175887 . + 2 Parent=GSCOCT00028387001 | |
| 18698 chr1 manual_curation CDS 32176024 32176121 . + 2 Parent=GSCOCT00028387001 | |
| 18699 chr1 manual_curation CDS 32176208 32176251 . + 1 Parent=GSCOCT00028387001 | |
| 18700 chr1 manual_curation gene 32182777 32185482 . - . ID=GSCOCG00028389001;Name=Cc01_g14030 | |
| 18701 chr1 manual_curation mRNA 32182777 32185482 . - . ID=GSCOCT00028389001;Parent=GSCOCG00028389001;Name=Cc01_g14030 | |
| 18702 chr1 manual_curation polypeptide 32182777 32185482 . - . ID=GSCOCP00028389001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001005,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR014778,InterPro:IPR015495,InterPro:IPR017930,PANTHER:PTHR10641,PFAM:PF00249,PROFILE:PS51294,SMART:SM00717,SUPERFAMILY:SSF46689,SwissProt:P04197,SwissProt:P10243,SwissProt:Q9S7L2,TAIR:AT3G27785.1,TAIR:AT5G11050.1,TAIR:AT5G58850.1,TrEMBL:B9GIJ3,TrEMBL:B9HP58,TrEMBL:B9SHZ4;Derives_from=GSCOCT00028389001;Name=Cc01_g14030;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative myb domain protein 119,CC_functional_completeness:complete,CC_gene:MYB98,CC_gene:Myb,CC_gene:MYBL1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028389001~ Putative myb domain protein 119~ MYB98~ complete;original_location=complement(join(1997456..1997943%2C1997166..1997292%2C1995238..1996164));owner=coffea | |
| 18703 chr1 manual_curation exon 32182777 32183703 . - . Parent=GSCOCT00028389001 | |
| 18704 chr1 manual_curation exon 32184705 32184831 . - . Parent=GSCOCT00028389001 | |
| 18705 chr1 manual_curation exon 32184995 32185482 . - . Parent=GSCOCT00028389001 | |
| 18706 chr1 manual_curation CDS 32182777 32183703 . - 0 Parent=GSCOCT00028389001 | |
| 18707 chr1 manual_curation CDS 32184705 32184831 . - 2 Parent=GSCOCT00028389001 | |
| 18708 chr1 manual_curation CDS 32184995 32185482 . - 0 Parent=GSCOCT00028389001 | |
| 18709 chr1 manual_curation gene 32192312 32195306 . - . ID=GSCOCG00028391001;Name=Cc01_g14040 | |
| 18710 chr1 manual_curation mRNA 32192312 32195306 . - . ID=GSCOCT00028391001;Parent=GSCOCG00028391001;Name=Cc01_g14040 | |
| 18711 chr1 manual_curation polypeptide 32192425 32194718 . - . ID=GSCOCP00028391001;Dbxref=GENE3D:G3DSA:1.25.40.10,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR019734,PROFILE:PS50005,PROFILE:PS50293,TAIR:AT1G07280.1,TAIR:AT2G29670.1,TAIR:AT3G47080.1,TrEMBL:B9GIJ2,TrEMBL:B9HP57,TrEMBL:F6GUT5;Derives_from=GSCOCT00028391001;Name=Cc01_g14040;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:Tetratricopeptide repeat (TPR)-like superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028391001~ Tetratricopeptide repeat (TPR)-like superfamily protein~ unknown_gene~ complete;original_location=complement(join(2005747..2007179%2C2004886..2005135));owner=coffea | |
| 18712 chr1 manual_curation exon 32195089 32195306 . - . Parent=GSCOCT00028391001 | |
| 18713 chr1 manual_curation exon 32192312 32192674 . - . Parent=GSCOCT00028391001 | |
| 18714 chr1 manual_curation exon 32193286 32194849 . - . Parent=GSCOCT00028391001 | |
| 18715 chr1 manual_curation CDS 32192425 32192674 . - 2 Parent=GSCOCT00028391001 | |
| 18716 chr1 manual_curation CDS 32193286 32194718 . - 0 Parent=GSCOCT00028391001 | |
| 18717 chr1 manual_curation gene 32210319 32216588 . + . ID=GSCOCG00028393001;Name=Cc01_g14050 | |
| 18718 chr1 manual_curation mRNA 32210319 32216588 . + . ID=GSCOCT00028393001;Parent=GSCOCG00028393001;Name=Cc01_g14050 | |
| 18719 chr1 manual_curation polypeptide 32210319 32216132 . + . ID=GSCOCP00028393001;Dbxref=InterPro:IPR015163,InterPro:IPR016314,PFAM:PF09079,PIR:PIRSF001767,SwissProt:O89033,SwissProt:P41411,SwissProt:Q99741,TAIR:AT1G07270.1,TAIR:AT2G29680.1,TAIR:AT4G14700.1,TrEMBL:B9GIJ1,TrEMBL:B9SI02,TrEMBL:F6GUT4;Derives_from=GSCOCT00028393001;Name=Cc01_g14050;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Cell division control protein 6 homolog,CC_functional_completeness:complete,CC_gene:Cdc6,CC_gene:CDC6,CC_gene:cdc18;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028393001~ Putative Cell division control protein 6 homolog~ Cdc6~ complete;original_location=join(2022780..2022995%2C2023083..2023155%2C2023421..2023641%2C2024223..2024297%2C2024378..2024487%2C2024629..2024735%2C2024837..2024896%2C2025176..2025249%2C2025598..2025648%2C2025797..2025846%2C2026373..2026484%2C2026863..2026952%2C2028017..2028079%2C2028165..2028260%2C2028372..2028461%2C2028558..2028593);owner=coffea | |
| 18720 chr1 manual_curation exon 32210319 32210534 . + . Parent=GSCOCT00028393001 | |
| 18721 chr1 manual_curation exon 32210622 32210694 . + . Parent=GSCOCT00028393001 | |
| 18722 chr1 manual_curation exon 32210960 32211180 . + . Parent=GSCOCT00028393001 | |
| 18723 chr1 manual_curation exon 32211762 32211836 . + . Parent=GSCOCT00028393001 | |
| 18724 chr1 manual_curation exon 32211917 32212026 . + . Parent=GSCOCT00028393001 | |
| 18725 chr1 manual_curation exon 32212168 32212274 . + . Parent=GSCOCT00028393001 | |
| 18726 chr1 manual_curation exon 32212376 32212435 . + . Parent=GSCOCT00028393001 | |
| 18727 chr1 manual_curation exon 32212715 32212788 . + . Parent=GSCOCT00028393001 | |
| 18728 chr1 manual_curation exon 32213137 32213187 . + . Parent=GSCOCT00028393001 | |
| 18729 chr1 manual_curation exon 32213336 32213385 . + . Parent=GSCOCT00028393001 | |
| 18730 chr1 manual_curation exon 32213912 32214023 . + . Parent=GSCOCT00028393001 | |
| 18731 chr1 manual_curation exon 32214402 32214491 . + . Parent=GSCOCT00028393001 | |
| 18732 chr1 manual_curation exon 32215556 32215618 . + . Parent=GSCOCT00028393001 | |
| 18733 chr1 manual_curation exon 32215704 32215799 . + . Parent=GSCOCT00028393001 | |
| 18734 chr1 manual_curation exon 32215911 32216000 . + . Parent=GSCOCT00028393001 | |
| 18735 chr1 manual_curation exon 32216097 32216588 . + . Parent=GSCOCT00028393001 | |
| 18736 chr1 manual_curation CDS 32210319 32210534 . + 0 Parent=GSCOCT00028393001 | |
| 18737 chr1 manual_curation CDS 32210622 32210694 . + 0 Parent=GSCOCT00028393001 | |
| 18738 chr1 manual_curation CDS 32210960 32211180 . + 1 Parent=GSCOCT00028393001 | |
| 18739 chr1 manual_curation CDS 32211762 32211836 . + 0 Parent=GSCOCT00028393001 | |
| 18740 chr1 manual_curation CDS 32211917 32212026 . + 0 Parent=GSCOCT00028393001 | |
| 18741 chr1 manual_curation CDS 32212168 32212274 . + 2 Parent=GSCOCT00028393001 | |
| 18742 chr1 manual_curation CDS 32212376 32212435 . + 1 Parent=GSCOCT00028393001 | |
| 18743 chr1 manual_curation CDS 32212715 32212788 . + 1 Parent=GSCOCT00028393001 | |
| 18744 chr1 manual_curation CDS 32213137 32213187 . + 0 Parent=GSCOCT00028393001 | |
| 18745 chr1 manual_curation CDS 32213336 32213385 . + 0 Parent=GSCOCT00028393001 | |
| 18746 chr1 manual_curation CDS 32213912 32214023 . + 2 Parent=GSCOCT00028393001 | |
| 18747 chr1 manual_curation CDS 32214402 32214491 . + 0 Parent=GSCOCT00028393001 | |
| 18748 chr1 manual_curation CDS 32215556 32215618 . + 0 Parent=GSCOCT00028393001 | |
| 18749 chr1 manual_curation CDS 32215704 32215799 . + 0 Parent=GSCOCT00028393001 | |
| 18750 chr1 manual_curation CDS 32215911 32216000 . + 0 Parent=GSCOCT00028393001 | |
| 18751 chr1 manual_curation CDS 32216097 32216132 . + 0 Parent=GSCOCT00028393001 | |
| 18752 chr1 manual_curation gene 32217354 32217501 . - . ID=GSCOCG00028394001;Name=Cc01_g14060 | |
| 18753 chr1 manual_curation mRNA 32217354 32217501 . - . ID=GSCOCT00028394001;Parent=GSCOCG00028394001;Name=Cc01_g14060 | |
| 18754 chr1 manual_curation polypeptide 32217354 32217501 . - . ID=GSCOCP00028394001;Derives_from=GSCOCT00028394001;Name=Cc01_g14060;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028394001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(2029924..2029962%2C2029815..2029850));owner=coffea | |
| 18755 chr1 manual_curation exon 32217354 32217389 . - . Parent=GSCOCT00028394001 | |
| 18756 chr1 manual_curation exon 32217463 32217501 . - . Parent=GSCOCT00028394001 | |
| 18757 chr1 manual_curation CDS 32217354 32217389 . - 0 Parent=GSCOCT00028394001 | |
| 18758 chr1 manual_curation CDS 32217463 32217501 . - 0 Parent=GSCOCT00028394001 | |
| 18759 chr1 manual_curation gene 32225058 32230520 . + . ID=GSCOCG00028395001;Name=Cc01_g14070 | |
| 18760 chr1 manual_curation mRNA 32225058 32230520 . + . ID=GSCOCT00028395001;Parent=GSCOCG00028395001;Name=Cc01_g14070 | |
| 18761 chr1 manual_curation polypeptide 32225172 32230176 . + . ID=GSCOCP00028395001;Dbxref=GENE3D:G3DSA:3.60.120.10,InterPro:IPR005256,InterPro:IPR005801,InterPro:IPR006805,InterPro:IPR015890,InterPro:IPR019999,PANTHER:PTHR11236,PFAM:PF00425,PFAM:PF04715,PRINTS:PR00095,SUPERFAMILY:SSF56322,SwissProt:P14953,SwissProt:P32068,SwissProt:P32069,TAIR:AT2G29690.1,TAIR:AT3G55870.1,TAIR:AT5G05730.2,TIGRFAMs:TIGR00564,TrEMBL:F6GUT2,TrEMBL:I1NF54;Derives_from=GSCOCT00028395001;Name=Cc01_g14070;Ontology_term=CC_evidence_code:ISS,GO:0000162,GO:0004049,GO:0009058,GO:0016833,CC_EC_number:4.1.3.27,CC_EC_number:4.1.3.27,PRODUCT:Anthranilate synthase component I-2%2C chloroplastic,CC_functional_completeness:complete,CC_gene:ASA2,CC_gene:ASA1,CC_gene:trpE;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028395001~ Anthranilate synthase component I-2%2C chloroplastic~ ASA2~ complete;original_location=join(2037633..2037795%2C2037915..2038099%2C2038500..2038689%2C2039361..2039512%2C2039910..2040025%2C2040115..2040361%2C2040438..2040494%2C2040685..2040837%2C2041430..2041510%2C2042001..2042087%2C2042314..2042637);owner=coffea | |
| 18762 chr1 manual_curation exon 32225058 32225334 . + . Parent=GSCOCT00028395001 | |
| 18763 chr1 manual_curation exon 32225454 32225638 . + . Parent=GSCOCT00028395001 | |
| 18764 chr1 manual_curation exon 32226039 32226228 . + . Parent=GSCOCT00028395001 | |
| 18765 chr1 manual_curation exon 32226900 32227051 . + . Parent=GSCOCT00028395001 | |
| 18766 chr1 manual_curation exon 32227449 32227564 . + . Parent=GSCOCT00028395001 | |
| 18767 chr1 manual_curation exon 32227654 32227900 . + . Parent=GSCOCT00028395001 | |
| 18768 chr1 manual_curation exon 32227977 32228033 . + . Parent=GSCOCT00028395001 | |
| 18769 chr1 manual_curation exon 32228224 32228376 . + . Parent=GSCOCT00028395001 | |
| 18770 chr1 manual_curation exon 32228969 32229049 . + . Parent=GSCOCT00028395001 | |
| 18771 chr1 manual_curation exon 32229540 32229626 . + . Parent=GSCOCT00028395001 | |
| 18772 chr1 manual_curation exon 32229853 32230520 . + . Parent=GSCOCT00028395001 | |
| 18773 chr1 manual_curation CDS 32225172 32225334 . + 0 Parent=GSCOCT00028395001 | |
| 18774 chr1 manual_curation CDS 32225454 32225638 . + 1 Parent=GSCOCT00028395001 | |
| 18775 chr1 manual_curation CDS 32226039 32226228 . + 0 Parent=GSCOCT00028395001 | |
| 18776 chr1 manual_curation CDS 32226900 32227051 . + 1 Parent=GSCOCT00028395001 | |
| 18777 chr1 manual_curation CDS 32227449 32227564 . + 0 Parent=GSCOCT00028395001 | |
| 18778 chr1 manual_curation CDS 32227654 32227900 . + 2 Parent=GSCOCT00028395001 | |
| 18779 chr1 manual_curation CDS 32227977 32228033 . + 0 Parent=GSCOCT00028395001 | |
| 18780 chr1 manual_curation CDS 32228224 32228376 . + 0 Parent=GSCOCT00028395001 | |
| 18781 chr1 manual_curation CDS 32228969 32229049 . + 0 Parent=GSCOCT00028395001 | |
| 18782 chr1 manual_curation CDS 32229540 32229626 . + 0 Parent=GSCOCT00028395001 | |
| 18783 chr1 manual_curation CDS 32229853 32230176 . + 0 Parent=GSCOCT00028395001 | |
| 18784 chr1 manual_curation gene 32231254 32233360 . + . ID=GSCOCG00028397001;Name=Cc01_g14080 | |
| 18785 chr1 manual_curation mRNA 32231254 32233360 . + . ID=GSCOCT00028397001;Parent=GSCOCG00028397001;Name=Cc01_g14080 | |
| 18786 chr1 manual_curation polypeptide 32231622 32233221 . + . ID=GSCOCP00028397001;Dbxref=InterPro:IPR005025,InterPro:IPR008254,InterPro:IPR010089,PFAM:PF03358,PROFILE:PS50902,SwissProt:C4XGC2,SwissProt:P0A8G8,SwissProt:Q32HQ6,TAIR:AT4G27270.1,TAIR:AT4G36750.1,TAIR:AT5G58800.1,TIGRFAMs:TIGR01755,TrEMBL:B9HP55,TrEMBL:B9SI05,TrEMBL:D7SK01;Derives_from=GSCOCT00028397001;Name=Cc01_g14080;Ontology_term=CC_evidence_code:ISS,GO:0010181,GO:0016481,GO:0016491,CC_EC_number:missing_EC_number,PRODUCT:Putative Flavoprotein WrbA,CC_functional_completeness:complete,CC_gene:wrbA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028397001~ Putative Flavoprotein WrbA~ wrbA~ complete;original_location=join(2044083..2044108%2C2044198..2044291%2C2044381..2044646%2C2045439..2045682);owner=coffea | |
| 18787 chr1 manual_curation exon 32231254 32231647 . + . Parent=GSCOCT00028397001 | |
| 18788 chr1 manual_curation exon 32231737 32231830 . + . Parent=GSCOCT00028397001 | |
| 18789 chr1 manual_curation exon 32231920 32232185 . + . Parent=GSCOCT00028397001 | |
| 18790 chr1 manual_curation exon 32232978 32233360 . + . Parent=GSCOCT00028397001 | |
| 18791 chr1 manual_curation CDS 32231622 32231647 . + 0 Parent=GSCOCT00028397001 | |
| 18792 chr1 manual_curation CDS 32231737 32231830 . + 2 Parent=GSCOCT00028397001 | |
| 18793 chr1 manual_curation CDS 32231920 32232185 . + 0 Parent=GSCOCT00028397001 | |
| 18794 chr1 manual_curation CDS 32232978 32233221 . + 2 Parent=GSCOCT00028397001 | |
| 18795 chr1 manual_curation gene 32233733 32234754 . + . ID=GSCOCG00028398001;Name=Cc01_g14090 | |
| 18796 chr1 manual_curation mRNA 32233733 32234754 . + . ID=GSCOCT00028398001;Parent=GSCOCG00028398001;Name=Cc01_g14090 | |
| 18797 chr1 manual_curation polypeptide 32233928 32234368 . + . ID=GSCOCP00028398001;Dbxref=GENE3D:G3DSA:2.30.29.30,InterPro:IPR001849,InterPro:IPR011993,PFAM:PF00169,PROFILE:PS50003,SMART:SM00233,SwissProt:Q80TI1,SwissProt:Q9ST43,SwissProt:Q9ULM0,TAIR:AT2G29700.1,TAIR:AT5G05710.1,TrEMBL:B9HP54,TrEMBL:D7LLC4,TrEMBL:G7KGZ7;Derives_from=GSCOCT00028398001;Name=Cc01_g14090;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pleckstrin homology domain-containing protein 1,CC_functional_completeness:complete,CC_gene:PH1,CC_gene:PLEKHH1,CC_gene:Plekhh1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028398001~ Pleckstrin homology domain-containing protein 1~ PH1~ complete;original_location=2046389..2046829;owner=coffea | |
| 18798 chr1 manual_curation exon 32233733 32234754 . + . Parent=GSCOCT00028398001 | |
| 18799 chr1 manual_curation CDS 32233928 32234368 . + 0 Parent=GSCOCT00028398001 | |
| 18800 chr1 manual_curation gene 32236515 32239658 . + . ID=GSCOCG00028399001;Name=Cc01_g14100 | |
| 18801 chr1 manual_curation mRNA 32236515 32239658 . + . ID=GSCOCT00028399001;Parent=GSCOCG00028399001;Name=Cc01_g14100 | |
| 18802 chr1 manual_curation polypeptide 32236749 32238974 . + . ID=GSCOCP00028399001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:O82380,SwissProt:Q9LN01,SwissProt:Q9LTV8,TAIR:AT1G08070.1,TAIR:AT2G29760.1,TAIR:AT3G12770.1,TIGRFAMs:TIGR00756,TrEMBL:B9HP52,TrEMBL:D7LLD1,TrEMBL:F6GUS6;Derives_from=GSCOCT00028399001;Name=Cc01_g14100;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At2g29760%2C chloroplastic,CC_functional_completeness:complete,CC_gene:PCMP-H33,CC_gene:PCMP-H12,CC_gene:PCMP-H43;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028399001~ Pentatricopeptide repeat-containing protein At2g29760%2C chloroplastic~ PCMP-H33~ complete;original_location=2049210..2051435;owner=coffea | |
| 18803 chr1 manual_curation exon 32236515 32239658 . + . Parent=GSCOCT00028399001 | |
| 18804 chr1 manual_curation CDS 32236749 32238974 . + 0 Parent=GSCOCT00028399001 | |
| 18805 chr1 manual_curation gene 32240209 32243497 . - . ID=GSCOCG00028400001;Name=Cc01_g14110 | |
| 18806 chr1 manual_curation mRNA 32240209 32243497 . - . ID=GSCOCT00028400001;Parent=GSCOCG00028400001;Name=Cc01_g14110 | |
| 18807 chr1 manual_curation polypeptide 32240209 32243497 . - . ID=GSCOCP00028400001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:C0LGP4,SwissProt:C0LGT6,SwissProt:Q9SD62,TAIR:AT3G47110.1,TAIR:AT3G47570.1,TAIR:AT5G20480.1,TrEMBL:B9SUC9,TrEMBL:D7LGV9,TrEMBL:D7LNA7;Derives_from=GSCOCT00028400001;Name=Cc01_g14110;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.10.2,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570,CC_functional_completeness:complete,CC_gene:At3g47570,CC_gene:At3g47110,CC_gene:EFR;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028400001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570~ At3g47570~ complete;original_location=complement(join(2053967..2055958%2C2053261..2053909%2C2052670..2053136));owner=coffea | |
| 18808 chr1 manual_curation exon 32240209 32240675 . - . Parent=GSCOCT00028400001 | |
| 18809 chr1 manual_curation exon 32240800 32241448 . - . Parent=GSCOCT00028400001 | |
| 18810 chr1 manual_curation exon 32241506 32243497 . - . Parent=GSCOCT00028400001 | |
| 18811 chr1 manual_curation CDS 32240209 32240675 . - 1 Parent=GSCOCT00028400001 | |
| 18812 chr1 manual_curation CDS 32240800 32241448 . - 0 Parent=GSCOCT00028400001 | |
| 18813 chr1 manual_curation CDS 32241506 32243497 . - 0 Parent=GSCOCT00028400001 | |
| 18814 chr1 manual_curation gene 32253268 32266577 . + . ID=GSCOCG00028402001;Name=Cc01_g14120 | |
| 18815 chr1 manual_curation mRNA 32253268 32266577 . + . ID=GSCOCT00028402001;Parent=GSCOCG00028402001;Name=Cc01_g14120 | |
| 18816 chr1 manual_curation polypeptide 32253341 32265905 . + . ID=GSCOCP00028402001;Dbxref=GENE3D:G3DSA:1.10.950.10,InterPro:IPR003128,InterPro:IPR007122,InterPro:IPR007123,PANTHER:PTHR11977,PFAM:PF00626,PFAM:PF02209,PRINTS:PR00597,PROFILE:PS51089,SMART:SM00153,SMART:SM00262,SUPERFAMILY:SSF47050,SwissProt:O65570,SwissProt:O81643,SwissProt:O81645,TAIR:AT2G29890.3,TAIR:AT4G30160.2,TAIR:AT5G57320.1,TrEMBL:B9HP49,TrEMBL:B9SI12,TrEMBL:D7SJY9;Derives_from=GSCOCT00028402001;Name=Cc01_g14120;Ontology_term=CC_evidence_code:ISS,GO:0003779,GO:0007010,CC_EC_number:missing_EC_number,PRODUCT:Villin-1,CC_functional_completeness:complete,CC_gene:VLN1,CC_gene:VLN4,CC_gene:VLN3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028402001~ Villin-1~ VLN1~ complete;original_location=join(2065802..2065857%2C2066335..2066434%2C2066685..2066753%2C2067109..2067193%2C2067275..2067345%2C2067578..2067755%2C2067834..2067966%2C2068381..2068546%2C2069842..2069992%2C2070084..2070175%2C2070256..2070411%2C2071308..2071376%2C2072943..2073011%2C2073136..2073273%2C2073492..2073620%2C2073719..2073847%2C2075015..2075197%2C2075556..2075681%2C2075905..2075967%2C2076144..2076375%2C2077395..2077549%2C2078253..2078366);owner=coffea | |
| 18817 chr1 manual_curation exon 32253268 32253396 . + . Parent=GSCOCT00028402001 | |
| 18818 chr1 manual_curation exon 32253874 32253973 . + . Parent=GSCOCT00028402001 | |
| 18819 chr1 manual_curation exon 32254224 32254292 . + . Parent=GSCOCT00028402001 | |
| 18820 chr1 manual_curation exon 32254648 32254732 . + . Parent=GSCOCT00028402001 | |
| 18821 chr1 manual_curation exon 32254814 32254884 . + . Parent=GSCOCT00028402001 | |
| 18822 chr1 manual_curation exon 32255117 32255294 . + . Parent=GSCOCT00028402001 | |
| 18823 chr1 manual_curation exon 32255373 32255505 . + . Parent=GSCOCT00028402001 | |
| 18824 chr1 manual_curation exon 32255920 32256085 . + . Parent=GSCOCT00028402001 | |
| 18825 chr1 manual_curation exon 32257381 32257531 . + . Parent=GSCOCT00028402001 | |
| 18826 chr1 manual_curation exon 32257623 32257714 . + . Parent=GSCOCT00028402001 | |
| 18827 chr1 manual_curation exon 32257795 32257950 . + . Parent=GSCOCT00028402001 | |
| 18828 chr1 manual_curation exon 32258847 32258915 . + . Parent=GSCOCT00028402001 | |
| 18829 chr1 manual_curation exon 32260482 32260550 . + . Parent=GSCOCT00028402001 | |
| 18830 chr1 manual_curation exon 32260675 32260812 . + . Parent=GSCOCT00028402001 | |
| 18831 chr1 manual_curation exon 32261031 32261159 . + . Parent=GSCOCT00028402001 | |
| 18832 chr1 manual_curation exon 32261258 32261386 . + . Parent=GSCOCT00028402001 | |
| 18833 chr1 manual_curation exon 32262554 32262736 . + . Parent=GSCOCT00028402001 | |
| 18834 chr1 manual_curation exon 32263095 32263220 . + . Parent=GSCOCT00028402001 | |
| 18835 chr1 manual_curation exon 32263444 32263506 . + . Parent=GSCOCT00028402001 | |
| 18836 chr1 manual_curation exon 32263683 32263914 . + . Parent=GSCOCT00028402001 | |
| 18837 chr1 manual_curation exon 32264934 32265088 . + . Parent=GSCOCT00028402001 | |
| 18838 chr1 manual_curation exon 32265792 32266577 . + . Parent=GSCOCT00028402001 | |
| 18839 chr1 manual_curation CDS 32253341 32253396 . + 0 Parent=GSCOCT00028402001 | |
| 18840 chr1 manual_curation CDS 32253874 32253973 . + 2 Parent=GSCOCT00028402001 | |
| 18841 chr1 manual_curation CDS 32254224 32254292 . + 0 Parent=GSCOCT00028402001 | |
| 18842 chr1 manual_curation CDS 32254648 32254732 . + 0 Parent=GSCOCT00028402001 | |
| 18843 chr1 manual_curation CDS 32254814 32254884 . + 1 Parent=GSCOCT00028402001 | |
| 18844 chr1 manual_curation CDS 32255117 32255294 . + 0 Parent=GSCOCT00028402001 | |
| 18845 chr1 manual_curation CDS 32255373 32255505 . + 1 Parent=GSCOCT00028402001 | |
| 18846 chr1 manual_curation CDS 32255920 32256085 . + 2 Parent=GSCOCT00028402001 | |
| 18847 chr1 manual_curation CDS 32257381 32257531 . + 0 Parent=GSCOCT00028402001 | |
| 18848 chr1 manual_curation CDS 32257623 32257714 . + 1 Parent=GSCOCT00028402001 | |
| 18849 chr1 manual_curation CDS 32257795 32257950 . + 0 Parent=GSCOCT00028402001 | |
| 18850 chr1 manual_curation CDS 32258847 32258915 . + 0 Parent=GSCOCT00028402001 | |
| 18851 chr1 manual_curation CDS 32260482 32260550 . + 0 Parent=GSCOCT00028402001 | |
| 18852 chr1 manual_curation CDS 32260675 32260812 . + 0 Parent=GSCOCT00028402001 | |
| 18853 chr1 manual_curation CDS 32261031 32261159 . + 0 Parent=GSCOCT00028402001 | |
| 18854 chr1 manual_curation CDS 32261258 32261386 . + 0 Parent=GSCOCT00028402001 | |
| 18855 chr1 manual_curation CDS 32262554 32262736 . + 0 Parent=GSCOCT00028402001 | |
| 18856 chr1 manual_curation CDS 32263095 32263220 . + 0 Parent=GSCOCT00028402001 | |
| 18857 chr1 manual_curation CDS 32263444 32263506 . + 0 Parent=GSCOCT00028402001 | |
| 18858 chr1 manual_curation CDS 32263683 32263914 . + 0 Parent=GSCOCT00028402001 | |
| 18859 chr1 manual_curation CDS 32264934 32265088 . + 1 Parent=GSCOCT00028402001 | |
| 18860 chr1 manual_curation CDS 32265792 32265905 . + 0 Parent=GSCOCT00028402001 | |
| 18861 chr1 manual_curation gene 32269586 32272525 . + . ID=GSCOCG00028404001;Name=Cc01_g14130 | |
| 18862 chr1 manual_curation mRNA 32269586 32272525 . + . ID=GSCOCT00028404001;Parent=GSCOCG00028404001;Name=Cc01_g14130 | |
| 18863 chr1 manual_curation polypeptide 32269922 32272298 . + . ID=GSCOCP00028404001;Dbxref=InterPro:IPR007312,PFAM:PF04185,TAIR:AT1G07230.1,TAIR:AT2G26870.1,TAIR:AT3G48610.1,TrEMBL:A5BX87,TrEMBL:B9SI13,TrEMBL:F6GUS4;Derives_from=GSCOCT00028404001;Name=Cc01_g14130;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:non-specific phospholipase C1,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028404001~ non-specific phospholipase C1~ unknown_gene~ fragment;original_location=join(2082383..2082563%2C2083647..2083823%2C2084440..2084759);owner=coffea | |
| 18864 chr1 manual_curation exon 32269586 32270102 . + . Parent=GSCOCT00028404001 | |
| 18865 chr1 manual_curation exon 32271186 32271362 . + . Parent=GSCOCT00028404001 | |
| 18866 chr1 manual_curation exon 32271979 32272525 . + . Parent=GSCOCT00028404001 | |
| 18867 chr1 manual_curation CDS 32269922 32270102 . + 0 Parent=GSCOCT00028404001 | |
| 18868 chr1 manual_curation CDS 32271186 32271362 . + 1 Parent=GSCOCT00028404001 | |
| 18869 chr1 manual_curation CDS 32271979 32272298 . + 1 Parent=GSCOCT00028404001 | |
| 18870 chr1 manual_curation gene 32273277 32274877 . + . ID=GSCOCG00028405001;Name=Cc01_g14140 | |
| 18871 chr1 manual_curation mRNA 32273277 32274877 . + . ID=GSCOCT00028405001;Parent=GSCOCG00028405001;Name=Cc01_g14140 | |
| 18872 chr1 manual_curation polypeptide 32273344 32274717 . + . ID=GSCOCP00028405001;Dbxref=InterPro:IPR001905,InterPro:IPR018047,PANTHER:PTHR11730,PFAM:PF00909,PROSITE:PS01219,SUPERFAMILY:SSF111352,SwissProt:O04161,SwissProt:Q7XQ12,SwissProt:Q9FVN0,TAIR:AT1G64780.1,TAIR:AT3G24300.1,TAIR:AT4G13510.1,TIGRFAMs:TIGR00836,TrEMBL:F6GUS3,TrEMBL:H6VN35,TrEMBL:H6VN36;Derives_from=GSCOCT00028405001;Name=Cc01_g14140;Ontology_term=CC_evidence_code:ISS,GO:0006810,GO:0008519,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Ammonium transporter 1 member 3,CC_functional_completeness:complete,CC_gene:AMT1-3,CC_gene:AMT1-1,CC_gene:AMT1-2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028405001~ Ammonium transporter 1 member 3~ AMT1-3~ complete;original_location=2085805..2087178;owner=coffea | |
| 18873 chr1 manual_curation exon 32273277 32274877 . + . Parent=GSCOCT00028405001 | |
| 18874 chr1 manual_curation CDS 32273344 32274717 . + 0 Parent=GSCOCT00028405001 | |
| 18875 chr1 manual_curation gene 32276128 32279270 . - . ID=GSCOCG00028406001;Name=Cc01_g14150 | |
| 18876 chr1 manual_curation mRNA 32276128 32279270 . - . ID=GSCOCT00028406001;Parent=GSCOCG00028406001;Name=Cc01_g14150 | |
| 18877 chr1 manual_curation polypeptide 32276574 32279103 . - . ID=GSCOCP00028406001;Dbxref=InterPro:IPR001841,InterPro:IPR017907,InterPro:IPR018957,PFAM:PF00097,PROFILE:PS50089,PROSITE:PS00518,SMART:SM00184,TAIR:AT3G47160.2,TAIR:AT5G01520.1,TAIR:AT5G58787.1,TrEMBL:B9HCM2,TrEMBL:B9IG88,TrEMBL:B9SQ34;Derives_from=GSCOCT00028406001;Name=Cc01_g14150;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:RING/U-box superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028406001~ RING/U-box superfamily protein~ unknown_gene~ complete;original_location=complement(join(2091500..2091564%2C2090408..2090558%2C2090168..2090234%2C2089834..2090068%2C2089035..2089245));owner=coffea | |
| 18878 chr1 manual_curation exon 32276128 32276784 . - . Parent=GSCOCT00028406001 | |
| 18879 chr1 manual_curation exon 32277373 32277607 . - . Parent=GSCOCT00028406001 | |
| 18880 chr1 manual_curation exon 32277707 32277773 . - . Parent=GSCOCT00028406001 | |
| 18881 chr1 manual_curation exon 32277947 32278097 . - . Parent=GSCOCT00028406001 | |
| 18882 chr1 manual_curation exon 32279039 32279270 . - . Parent=GSCOCT00028406001 | |
| 18883 chr1 manual_curation CDS 32276574 32276784 . - 2 Parent=GSCOCT00028406001 | |
| 18884 chr1 manual_curation CDS 32277373 32277607 . - 1 Parent=GSCOCT00028406001 | |
| 18885 chr1 manual_curation CDS 32277707 32277773 . - 0 Parent=GSCOCT00028406001 | |
| 18886 chr1 manual_curation CDS 32277947 32278097 . - 2 Parent=GSCOCT00028406001 | |
| 18887 chr1 manual_curation CDS 32279039 32279103 . - 0 Parent=GSCOCT00028406001 | |
| 18888 chr1 manual_curation gene 32282225 32291151 . + . ID=GSCOCG00028407001;Name=Cc01_g14160 | |
| 18889 chr1 manual_curation mRNA 32282225 32291151 . + . ID=GSCOCT00028407001;Parent=GSCOCG00028407001;Name=Cc01_g14160 | |
| 18890 chr1 manual_curation polypeptide 32282364 32290954 . + . ID=GSCOCP00028407001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019775,InterPro:IPR019781,InterPro:IPR019782,PFAM:PF00400,PROFILE:PS50082,PROFILE:PS50294,PROSITE:PS00678,SMART:SM00320,SUPERFAMILY:SSF50978,SwissProt:Q5ZJL7,SwissProt:Q66JG1,SwissProt:Q6NQ88,TAIR:AT1G80710.1,TAIR:AT5G58760.1,TrEMBL:A5BX89,TrEMBL:B9SI17,TrEMBL:I1MBA5;Derives_from=GSCOCT00028407001;Name=Cc01_g14160;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein DAMAGED DNA-BINDING 2,CC_functional_completeness:complete,CC_gene:DDB2,CC_gene:ddb2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028407001~ Protein DAMAGED DNA-BINDING 2~ DDB2~ complete;original_location=join(2094825..2095055%2C2095196..2095286%2C2099052..2099179%2C2099608..2099730%2C2099830..2099918%2C2100048..2100168%2C2100715..2100806%2C2101675..2101804%2C2102040..2102288%2C2102391..2102587%2C2103163..2103415);owner=coffea | |
| 18891 chr1 manual_curation exon 32282225 32282594 . + . Parent=GSCOCT00028407001 | |
| 18892 chr1 manual_curation exon 32282735 32282825 . + . Parent=GSCOCT00028407001 | |
| 18893 chr1 manual_curation exon 32286591 32286718 . + . Parent=GSCOCT00028407001 | |
| 18894 chr1 manual_curation exon 32287147 32287269 . + . Parent=GSCOCT00028407001 | |
| 18895 chr1 manual_curation exon 32287369 32287457 . + . Parent=GSCOCT00028407001 | |
| 18896 chr1 manual_curation exon 32287587 32287707 . + . Parent=GSCOCT00028407001 | |
| 18897 chr1 manual_curation exon 32288254 32288345 . + . Parent=GSCOCT00028407001 | |
| 18898 chr1 manual_curation exon 32289214 32289343 . + . Parent=GSCOCT00028407001 | |
| 18899 chr1 manual_curation exon 32289579 32289827 . + . Parent=GSCOCT00028407001 | |
| 18900 chr1 manual_curation exon 32289930 32290126 . + . Parent=GSCOCT00028407001 | |
| 18901 chr1 manual_curation exon 32290702 32291151 . + . Parent=GSCOCT00028407001 | |
| 18902 chr1 manual_curation CDS 32282364 32282594 . + 0 Parent=GSCOCT00028407001 | |
| 18903 chr1 manual_curation CDS 32282735 32282825 . + 0 Parent=GSCOCT00028407001 | |
| 18904 chr1 manual_curation CDS 32286591 32286718 . + 1 Parent=GSCOCT00028407001 | |
| 18905 chr1 manual_curation CDS 32287147 32287269 . + 0 Parent=GSCOCT00028407001 | |
| 18906 chr1 manual_curation CDS 32287369 32287457 . + 0 Parent=GSCOCT00028407001 | |
| 18907 chr1 manual_curation CDS 32287587 32287707 . + 2 Parent=GSCOCT00028407001 | |
| 18908 chr1 manual_curation CDS 32288254 32288345 . + 0 Parent=GSCOCT00028407001 | |
| 18909 chr1 manual_curation CDS 32289214 32289343 . + 2 Parent=GSCOCT00028407001 | |
| 18910 chr1 manual_curation CDS 32289579 32289827 . + 0 Parent=GSCOCT00028407001 | |
| 18911 chr1 manual_curation CDS 32289930 32290126 . + 0 Parent=GSCOCT00028407001 | |
| 18912 chr1 manual_curation CDS 32290702 32290954 . + 2 Parent=GSCOCT00028407001 | |
| 18913 chr1 manual_curation gene 32324359 32327623 . - . ID=GSCOCG00028412001;Name=Cc01_g14170 | |
| 18914 chr1 manual_curation mRNA 32324359 32327623 . - . ID=GSCOCT00028412001;Parent=GSCOCG00028412001;Name=Cc01_g14170 | |
| 18915 chr1 manual_curation polypeptide 32324594 32327405 . - . ID=GSCOCP00028412001;Dbxref=InterPro:IPR004713,InterPro:IPR004798,InterPro:IPR004837,PFAM:PF01699,SwissProt:Q39253,SwissProt:Q93Z81,SwissProt:Q945S5,TAIR:AT2G38170.3,TAIR:AT3G51860.1,TAIR:AT5G01490.1,TIGRFAMs:TIGR00378,TIGRFAMs:TIGR00846,TrEMBL:B9SQ31,TrEMBL:D7SJY1,TrEMBL:I1JLF3;Derives_from=GSCOCT00028412001;Name=Cc01_g14170;Ontology_term=CC_evidence_code:ISS,GO:0006812,GO:0008324,GO:0016021,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Vacuolar cation/proton exchanger 1,CC_functional_completeness:complete,CC_gene:CAX1,CC_gene:CAX3,CC_gene:CAX4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028412001~ Vacuolar cation/proton exchanger 1~ CAX1~ complete;original_location=complement(join(2139750..2139866%2C2139300..2139367%2C2139142..2139170%2C2138836..2139032%2C2138370..2138591%2C2137995..2138117%2C2137772..2137888%2C2137630..2137683%2C2137260..2137376%2C2137055..2137168));owner=coffea | |
| 18916 chr1 manual_curation exon 32324359 32324707 . - . Parent=GSCOCT00028412001 | |
| 18917 chr1 manual_curation exon 32324799 32324915 . - . Parent=GSCOCT00028412001 | |
| 18918 chr1 manual_curation exon 32325169 32325222 . - . Parent=GSCOCT00028412001 | |
| 18919 chr1 manual_curation exon 32325311 32325427 . - . Parent=GSCOCT00028412001 | |
| 18920 chr1 manual_curation exon 32325534 32325656 . - . Parent=GSCOCT00028412001 | |
| 18921 chr1 manual_curation exon 32325909 32326130 . - . Parent=GSCOCT00028412001 | |
| 18922 chr1 manual_curation exon 32326375 32326571 . - . Parent=GSCOCT00028412001 | |
| 18923 chr1 manual_curation exon 32326681 32326709 . - . Parent=GSCOCT00028412001 | |
| 18924 chr1 manual_curation exon 32326839 32326906 . - . Parent=GSCOCT00028412001 | |
| 18925 chr1 manual_curation exon 32327289 32327623 . - . Parent=GSCOCT00028412001 | |
| 18926 chr1 manual_curation CDS 32324594 32324707 . - 0 Parent=GSCOCT00028412001 | |
| 18927 chr1 manual_curation CDS 32324799 32324915 . - 0 Parent=GSCOCT00028412001 | |
| 18928 chr1 manual_curation CDS 32325169 32325222 . - 0 Parent=GSCOCT00028412001 | |
| 18929 chr1 manual_curation CDS 32325311 32325427 . - 0 Parent=GSCOCT00028412001 | |
| 18930 chr1 manual_curation CDS 32325534 32325656 . - 0 Parent=GSCOCT00028412001 | |
| 18931 chr1 manual_curation CDS 32325909 32326130 . - 0 Parent=GSCOCT00028412001 | |
| 18932 chr1 manual_curation CDS 32326375 32326571 . - 1 Parent=GSCOCT00028412001 | |
| 18933 chr1 manual_curation CDS 32326681 32326709 . - 2 Parent=GSCOCT00028412001 | |
| 18934 chr1 manual_curation CDS 32326839 32326906 . - 0 Parent=GSCOCT00028412001 | |
| 18935 chr1 manual_curation CDS 32327289 32327405 . - 0 Parent=GSCOCT00028412001 | |
| 18936 chr1 manual_curation gene 32333026 32338887 . + . ID=GSCOCG00028413001;Name=Cc01_g14180 | |
| 18937 chr1 manual_curation mRNA 32333026 32338887 . + . ID=GSCOCT00028413001;Parent=GSCOCG00028413001;Name=Cc01_g14180 | |
| 18938 chr1 manual_curation polypeptide 32333486 32338448 . + . ID=GSCOCP00028413001;Dbxref=InterPro:IPR002173,InterPro:IPR011611,PFAM:PF00294,PROSITE:PS00584,TAIR:AT5G58730.1,TrEMBL:B9HP38,TrEMBL:C8YZA7,TrEMBL:F6GUR6;Derives_from=GSCOCT00028413001;Name=Cc01_g14180;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:pfkB-like carbohydrate kinase family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028413001~ pfkB-like carbohydrate kinase family protein~ unknown_gene~ complete;original_location=join(2145947..2146786%2C2150778..2150909);owner=coffea | |
| 18939 chr1 manual_curation exon 32333026 32334325 . + . Parent=GSCOCT00028413001 | |
| 18940 chr1 manual_curation exon 32338317 32338887 . + . Parent=GSCOCT00028413001 | |
| 18941 chr1 manual_curation CDS 32333486 32334325 . + 0 Parent=GSCOCT00028413001 | |
| 18942 chr1 manual_curation CDS 32338317 32338448 . + 0 Parent=GSCOCT00028413001 | |
| 18943 chr1 manual_curation gene 32340136 32349109 . + . ID=GSCOCG00028414001;Name=Cc01_g14190 | |
| 18944 chr1 manual_curation mRNA 32340136 32349109 . + . ID=GSCOCT00028414001;Parent=GSCOCG00028414001;Name=Cc01_g14190 | |
| 18945 chr1 manual_curation polypeptide 32340557 32348688 . + . ID=GSCOCP00028414001;Dbxref=InterPro:IPR002625,InterPro:IPR013899,PFAM:PF01713,PFAM:PF08590,PROFILE:PS50828,SMART:SM00463,TAIR:AT2G26280.1,TAIR:AT3G15390.1,TAIR:AT5G58720.1,TrEMBL:A5C8U4,TrEMBL:B9SI24,TrEMBL:D7SJX9;Derives_from=GSCOCT00028414001;Name=Cc01_g14190;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative smr (Small MutS Related) domain-containing protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028414001~ Putative smr (Small MutS Related) domain-containing protein~ unknown_gene~ complete;original_location=join(2153018..2153600%2C2153935..2153960%2C2154775..2154888%2C2155732..2155817%2C2157602..2157831%2C2158871..2158947%2C2159057..2159113%2C2160004..2160071%2C2160154..2160260%2C2160403..2160473%2C2161024..2161149);owner=coffea | |
| 18946 chr1 manual_curation exon 32340136 32341139 . + . Parent=GSCOCT00028414001 | |
| 18947 chr1 manual_curation exon 32341474 32341499 . + . Parent=GSCOCT00028414001 | |
| 18948 chr1 manual_curation exon 32342314 32342427 . + . Parent=GSCOCT00028414001 | |
| 18949 chr1 manual_curation exon 32343271 32343356 . + . Parent=GSCOCT00028414001 | |
| 18950 chr1 manual_curation exon 32345141 32345370 . + . Parent=GSCOCT00028414001 | |
| 18951 chr1 manual_curation exon 32346410 32346486 . + . Parent=GSCOCT00028414001 | |
| 18952 chr1 manual_curation exon 32346596 32346652 . + . Parent=GSCOCT00028414001 | |
| 18953 chr1 manual_curation exon 32347543 32347610 . + . Parent=GSCOCT00028414001 | |
| 18954 chr1 manual_curation exon 32347693 32347799 . + . Parent=GSCOCT00028414001 | |
| 18955 chr1 manual_curation exon 32347942 32348012 . + . Parent=GSCOCT00028414001 | |
| 18956 chr1 manual_curation exon 32348563 32349109 . + . Parent=GSCOCT00028414001 | |
| 18957 chr1 manual_curation CDS 32340557 32341139 . + 0 Parent=GSCOCT00028414001 | |
| 18958 chr1 manual_curation CDS 32341474 32341499 . + 1 Parent=GSCOCT00028414001 | |
| 18959 chr1 manual_curation CDS 32342314 32342427 . + 0 Parent=GSCOCT00028414001 | |
| 18960 chr1 manual_curation CDS 32343271 32343356 . + 0 Parent=GSCOCT00028414001 | |
| 18961 chr1 manual_curation CDS 32345141 32345370 . + 2 Parent=GSCOCT00028414001 | |
| 18962 chr1 manual_curation CDS 32346410 32346486 . + 1 Parent=GSCOCT00028414001 | |
| 18963 chr1 manual_curation CDS 32346596 32346652 . + 0 Parent=GSCOCT00028414001 | |
| 18964 chr1 manual_curation CDS 32347543 32347610 . + 0 Parent=GSCOCT00028414001 | |
| 18965 chr1 manual_curation CDS 32347693 32347799 . + 2 Parent=GSCOCT00028414001 | |
| 18966 chr1 manual_curation CDS 32347942 32348012 . + 1 Parent=GSCOCT00028414001 | |
| 18967 chr1 manual_curation CDS 32348563 32348688 . + 0 Parent=GSCOCT00028414001 | |
| 18968 chr1 manual_curation gene 32351310 32352460 . + . ID=GSCOCG00028415001;Name=Cc01_g14200 | |
| 18969 chr1 manual_curation mRNA 32351310 32352460 . + . ID=GSCOCT00028415001;Parent=GSCOCG00028415001;Name=Cc01_g14200 | |
| 18970 chr1 manual_curation polypeptide 32351442 32351879 . + . ID=GSCOCP00028415001;Dbxref=InterPro:IPR009741,PFAM:PF07011,SwissProt:O04211,SwissProt:O80877,SwissProt:Q8S8F5,TAIR:AT2G06255.1,TAIR:AT2G29950.1,TAIR:AT2G40080.1,TrEMBL:B9GIH8,TrEMBL:B9HP35,TrEMBL:C6ZKH9;Derives_from=GSCOCT00028415001;Name=Cc01_g14200;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein ELF4-LIKE 1,CC_functional_completeness:modules,CC_gene:ELF4,CC_gene:EFL1,CC_gene:EFL3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028415001~ Putative Protein ELF4-LIKE 1~ ELF4~ modules;original_location=2163903..2164340;owner=coffea | |
| 18971 chr1 manual_curation exon 32352258 32352460 . + . Parent=GSCOCT00028415001 | |
| 18972 chr1 manual_curation exon 32351310 32351956 . + . Parent=GSCOCT00028415001 | |
| 18973 chr1 manual_curation CDS 32351442 32351879 . + 0 Parent=GSCOCT00028415001 | |
| 18974 chr1 manual_curation gene 32352601 32354054 . + . ID=GSCOCG00028416001;Name=Cc01_g14210 | |
| 18975 chr1 manual_curation mRNA 32352601 32354054 . + . ID=GSCOCT00028416001;Parent=GSCOCG00028416001;Name=Cc01_g14210 | |
| 18976 chr1 manual_curation polypeptide 32353644 32353835 . + . ID=GSCOCP00028416001;Derives_from=GSCOCT00028416001;Name=Cc01_g14210;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028416001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=2166105..2166296;owner=coffea | |
| 18977 chr1 manual_curation exon 32352601 32354054 . + . Parent=GSCOCT00028416001 | |
| 18978 chr1 manual_curation CDS 32353644 32353835 . + 0 Parent=GSCOCT00028416001 | |
| 18979 chr1 manual_curation gene 32354597 32356930 . - . ID=GSCOCG00028417001;Name=Cc01_g14220 | |
| 18980 chr1 manual_curation mRNA 32354597 32356930 . - . ID=GSCOCT00028417001;Parent=GSCOCG00028417001;Name=Cc01_g14220 | |
| 18981 chr1 manual_curation polypeptide 32354918 32356843 . - . ID=GSCOCP00028417001;Dbxref=GENE3D:G3DSA:2.40.100.10,InterPro:IPR002130,InterPro:IPR015891,InterPro:IPR020892,PFAM:PF00160,PRINTS:PR00153,PROFILE:PS50072,PROSITE:PS00170,SUPERFAMILY:SSF50891,SwissProt:Q8LDP4,SwissProt:Q9SP02,SwissProt:Q9TW32,TAIR:AT2G29960.1,TAIR:AT3G55920.1,TAIR:AT5G58710.1,TrEMBL:A9P8C5,TrEMBL:A9PAQ9,TrEMBL:B6VEG9;Derives_from=GSCOCT00028417001;Name=Cc01_g14220;Ontology_term=CC_evidence_code:ISS,GO:0003755,GO:0006457,CC_EC_number:5.2.1.8,PRODUCT:Peptidyl-prolyl cis-trans isomerase CYP19-4,CC_functional_completeness:complete,CC_gene:CYP19-4,CC_gene:CYP20-1,CC_gene:cypB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028417001~ Peptidyl-prolyl cis-trans isomerase CYP19-4~ CYP19-4~ complete;original_location=complement(join(2169227..2169304%2C2168599..2168677%2C2168351..2168398%2C2168226..2168249%2C2167807..2167989%2C2167630..2167705%2C2167379..2167517));owner=coffea | |
| 18982 chr1 manual_curation exon 32354597 32355056 . - . Parent=GSCOCT00028417001 | |
| 18983 chr1 manual_curation exon 32355169 32355244 . - . Parent=GSCOCT00028417001 | |
| 18984 chr1 manual_curation exon 32355346 32355528 . - . Parent=GSCOCT00028417001 | |
| 18985 chr1 manual_curation exon 32355765 32355788 . - . Parent=GSCOCT00028417001 | |
| 18986 chr1 manual_curation exon 32355890 32355937 . - . Parent=GSCOCT00028417001 | |
| 18987 chr1 manual_curation exon 32356138 32356216 . - . Parent=GSCOCT00028417001 | |
| 18988 chr1 manual_curation exon 32356766 32356930 . - . Parent=GSCOCT00028417001 | |
| 18989 chr1 manual_curation CDS 32354918 32355056 . - 2 Parent=GSCOCT00028417001 | |
| 18990 chr1 manual_curation CDS 32355169 32355244 . - 1 Parent=GSCOCT00028417001 | |
| 18991 chr1 manual_curation CDS 32355346 32355528 . - 1 Parent=GSCOCT00028417001 | |
| 18992 chr1 manual_curation CDS 32355765 32355788 . - 1 Parent=GSCOCT00028417001 | |
| 18993 chr1 manual_curation CDS 32355890 32355937 . - 1 Parent=GSCOCT00028417001 | |
| 18994 chr1 manual_curation CDS 32356138 32356216 . - 0 Parent=GSCOCT00028417001 | |
| 18995 chr1 manual_curation CDS 32356766 32356843 . - 0 Parent=GSCOCT00028417001 | |
| 18996 chr1 manual_curation gene 32358374 32360637 . - . ID=GSCOCG00028419001;Name=Cc01_g14230 | |
| 18997 chr1 manual_curation mRNA 32358374 32360637 . - . ID=GSCOCT00028419001;Parent=GSCOCG00028419001;Name=Cc01_g14230 | |
| 18998 chr1 manual_curation polypeptide 32358374 32360024 . - . ID=GSCOCP00028419001;Dbxref=InterPro:IPR001841,InterPro:IPR017907,InterPro:IPR018957,PFAM:PF00097,PROFILE:PS50089,PROSITE:PS00518,SMART:SM00184,SwissProt:B8B5U8,SwissProt:Q7XI73,SwissProt:Q9SRX9,TAIR:AT1G02860.1,TAIR:AT2G38920.1,TrEMBL:B9GS97,TrEMBL:B9I9S3,TrEMBL:D7U277;Derives_from=GSCOCT00028419001;Name=Cc01_g14230;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative E3 ubiquitin-protein ligase BAH1,CC_functional_completeness:fragment,CC_gene:BAH1,CC_gene:OsI_27296,CC_gene:Os07g0673200;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028419001~ Putative E3 ubiquitin-protein ligase BAH1~ BAH1~ fragment;original_location=complement(join(2172315..2172485%2C2171732..2171971%2C2171508..2171645%2C2171075..2171133%2C2170835..2170943));owner=coffea | |
| 18999 chr1 manual_curation exon 32358374 32358482 . - . Parent=GSCOCT00028419001 | |
| 19000 chr1 manual_curation exon 32358614 32358672 . - . Parent=GSCOCT00028419001 | |
| 19001 chr1 manual_curation exon 32359047 32359184 . - . Parent=GSCOCT00028419001 | |
| 19002 chr1 manual_curation exon 32359271 32359510 . - . Parent=GSCOCT00028419001 | |
| 19003 chr1 manual_curation exon 32359854 32360637 . - . Parent=GSCOCT00028419001 | |
| 19004 chr1 manual_curation CDS 32358374 32358482 . - 2 Parent=GSCOCT00028419001 | |
| 19005 chr1 manual_curation CDS 32358614 32358672 . - 0 Parent=GSCOCT00028419001 | |
| 19006 chr1 manual_curation CDS 32359047 32359184 . - 0 Parent=GSCOCT00028419001 | |
| 19007 chr1 manual_curation CDS 32359271 32359510 . - 0 Parent=GSCOCT00028419001 | |
| 19008 chr1 manual_curation CDS 32359854 32360024 . - 0 Parent=GSCOCT00028419001 | |
| 19009 chr1 manual_curation gene 32364294 32369933 . + . ID=GSCOCG00028420001;Name=Cc01_g14240 | |
| 19010 chr1 manual_curation mRNA 32364294 32369933 . + . ID=GSCOCT00028420001;Parent=GSCOCG00028420001;Name=Cc01_g14240 | |
| 19011 chr1 manual_curation polypeptide 32364838 32369552 . + . ID=GSCOCP00028420001;Dbxref=InterPro:IPR001841,PROFILE:PS50089,TAIR:AT2G38185.4,TAIR:AT2G38220.1,TAIR:AT5G01450.1,TrEMBL:B9SI29,TrEMBL:B9SQ23,TrEMBL:D7SJX7;Derives_from=GSCOCT00028420001;Name=Cc01_g14240;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative RING/U-box superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028420001~ Putative RING/U-box superfamily protein~ unknown_gene~ complete;original_location=join(2177299..2177581%2C2177843..2177949%2C2178035..2178160%2C2178268..2178364%2C2178930..2179004%2C2179151..2179233%2C2180463..2180606%2C2181164..2181236%2C2181319..2181661%2C2181938..2182013);owner=coffea | |
| 19012 chr1 manual_curation exon 32364294 32365120 . + . Parent=GSCOCT00028420001 | |
| 19013 chr1 manual_curation exon 32365382 32365488 . + . Parent=GSCOCT00028420001 | |
| 19014 chr1 manual_curation exon 32365574 32365699 . + . Parent=GSCOCT00028420001 | |
| 19015 chr1 manual_curation exon 32365807 32365903 . + . Parent=GSCOCT00028420001 | |
| 19016 chr1 manual_curation exon 32366469 32366543 . + . Parent=GSCOCT00028420001 | |
| 19017 chr1 manual_curation exon 32366690 32366772 . + . Parent=GSCOCT00028420001 | |
| 19018 chr1 manual_curation exon 32368002 32368145 . + . Parent=GSCOCT00028420001 | |
| 19019 chr1 manual_curation exon 32368703 32368775 . + . Parent=GSCOCT00028420001 | |
| 19020 chr1 manual_curation exon 32368858 32369200 . + . Parent=GSCOCT00028420001 | |
| 19021 chr1 manual_curation exon 32369477 32369933 . + . Parent=GSCOCT00028420001 | |
| 19022 chr1 manual_curation CDS 32364838 32365120 . + 0 Parent=GSCOCT00028420001 | |
| 19023 chr1 manual_curation CDS 32365382 32365488 . + 1 Parent=GSCOCT00028420001 | |
| 19024 chr1 manual_curation CDS 32365574 32365699 . + 0 Parent=GSCOCT00028420001 | |
| 19025 chr1 manual_curation CDS 32365807 32365903 . + 0 Parent=GSCOCT00028420001 | |
| 19026 chr1 manual_curation CDS 32366469 32366543 . + 1 Parent=GSCOCT00028420001 | |
| 19027 chr1 manual_curation CDS 32366690 32366772 . + 1 Parent=GSCOCT00028420001 | |
| 19028 chr1 manual_curation CDS 32368002 32368145 . + 0 Parent=GSCOCT00028420001 | |
| 19029 chr1 manual_curation CDS 32368703 32368775 . + 0 Parent=GSCOCT00028420001 | |
| 19030 chr1 manual_curation CDS 32368858 32369200 . + 1 Parent=GSCOCT00028420001 | |
| 19031 chr1 manual_curation CDS 32369477 32369552 . + 2 Parent=GSCOCT00028420001 | |
| 19032 chr1 manual_curation gene 32371794 32375841 . + . ID=GSCOCG00028421001;Name=Cc01_g14250 | |
| 19033 chr1 manual_curation mRNA 32371794 32375841 . + . ID=GSCOCT00028421001;Parent=GSCOCG00028421001;Name=Cc01_g14250 | |
| 19034 chr1 manual_curation polypeptide 32371976 32375419 . + . ID=GSCOCP00028421001;Dbxref=InterPro:IPR006598,PFAM:PF05686,SMART:SM00672,SwissProt:B0X1Q4,SwissProt:Q5E9Q1,SwissProt:Q8NBL1,TAIR:AT1G07220.1,TAIR:AT3G48980.1,TAIR:AT5G23850.1,TrEMBL:I1LLK2,TrEMBL:I1MZZ5,TrEMBL:Q9LML4;Derives_from=GSCOCT00028421001;Name=Cc01_g14250;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative O-glucosyltransferase rumi homolog,CC_functional_completeness:modules,CC_gene:CPIJ013394,CC_gene:POGLUT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028421001~ Putative O-glucosyltransferase rumi homolog~ CPIJ013394~ modules;original_location=join(2184437..2184556%2C2185001..2185602%2C2186066..2186255%2C2186385..2186449%2C2186916..2187126%2C2187638..2187880);owner=coffea | |
| 19035 chr1 manual_curation exon 32371794 32372095 . + . Parent=GSCOCT00028421001 | |
| 19036 chr1 manual_curation exon 32372540 32373141 . + . Parent=GSCOCT00028421001 | |
| 19037 chr1 manual_curation exon 32373605 32373794 . + . Parent=GSCOCT00028421001 | |
| 19038 chr1 manual_curation exon 32373924 32373988 . + . Parent=GSCOCT00028421001 | |
| 19039 chr1 manual_curation exon 32374455 32374665 . + . Parent=GSCOCT00028421001 | |
| 19040 chr1 manual_curation exon 32375177 32375841 . + . Parent=GSCOCT00028421001 | |
| 19041 chr1 manual_curation CDS 32371976 32372095 . + 0 Parent=GSCOCT00028421001 | |
| 19042 chr1 manual_curation CDS 32372540 32373141 . + 0 Parent=GSCOCT00028421001 | |
| 19043 chr1 manual_curation CDS 32373605 32373794 . + 2 Parent=GSCOCT00028421001 | |
| 19044 chr1 manual_curation CDS 32373924 32373988 . + 0 Parent=GSCOCT00028421001 | |
| 19045 chr1 manual_curation CDS 32374455 32374665 . + 2 Parent=GSCOCT00028421001 | |
| 19046 chr1 manual_curation CDS 32375177 32375419 . + 0 Parent=GSCOCT00028421001 | |
| 19047 chr1 manual_curation gene 32378260 32379664 . + . ID=GSCOCG00028422001;Name=Cc01_g14260 | |
| 19048 chr1 manual_curation mRNA 32378260 32379664 . + . ID=GSCOCT00028422001;Parent=GSCOCG00028422001;Name=Cc01_g14260 | |
| 19049 chr1 manual_curation polypeptide 32378364 32379296 . + . ID=GSCOCP00028422001;Dbxref=HAMAP:MF_01824,InterPro:IPR001852,InterPro:IPR011060,PFAM:PF01680,PIR:PIRSF029271,PROFILE:PS51129,PROSITE:PS01235,SUPERFAMILY:SSF51366,SwissProt:Q39963,SwissProt:Q8L940,SwissProt:Q9FT25,TAIR:AT2G38230.1,TAIR:AT3G16050.1,TAIR:AT5G01410.1,TIGRFAMs:TIGR00343,TrEMBL:B9IG96,TrEMBL:Q6QND3;Derives_from=GSCOCT00028422001;Name=Cc01_g14260;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,GO:0042823,CC_EC_number:missing_EC_number,PRODUCT:Probable pyridoxal biosynthesis protein PDX1,CC_functional_completeness:complete,CC_gene:PDX1,CC_gene:PDX13;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028422001~ Probable pyridoxal biosynthesis protein PDX1~ PDX1~ complete;original_location=2190825..2191757;owner=coffea | |
| 19050 chr1 manual_curation exon 32378260 32379664 . + . Parent=GSCOCT00028422001 | |
| 19051 chr1 manual_curation CDS 32378364 32379296 . + 0 Parent=GSCOCT00028422001 | |
| 19052 chr1 manual_curation gene 32382098 32386854 . + . ID=GSCOCG00028423001;Name=Cc01_g14270 | |
| 19053 chr1 manual_curation mRNA 32382098 32386854 . + . ID=GSCOCT00028423001;Parent=GSCOCG00028423001;Name=Cc01_g14270 | |
| 19054 chr1 manual_curation polypeptide 32382260 32386585 . + . ID=GSCOCP00028423001;Dbxref=GENE3D:G3DSA:1.10.238.10,GENE3D:G3DSA:3.20.20.190,InterPro:IPR000008,InterPro:IPR000909,InterPro:IPR001192,InterPro:IPR001711,InterPro:IPR008973,InterPro:IPR011992,InterPro:IPR015359,InterPro:IPR017946,InterPro:IPR018029,PFAM:PF00168,PFAM:PF00387,PFAM:PF00388,PFAM:PF09279,PRINTS:PR00390,PROFILE:PS50004,PROFILE:PS50007,PROFILE:PS50008,SMART:SM00148,SMART:SM00149,SMART:SM00239,SUPERFAMILY:SSF49562,SUPERFAMILY:SSF51695,SwissProt:Q39033,SwissProt:Q8GV43,SwissProt:Q944C1,TAIR:AT2G40116.1,TAIR:AT3G08510.1,TAIR:AT5G58700.1,TrEMBL:A5A2F9,TrEMBL:B6C9K2,TrEMBL:O49902;Derives_from=GSCOCT00028423001;Name=Cc01_g14270;Ontology_term=CC_evidence_code:ISS,GO:0004435,GO:0004629,GO:0005509,GO:0006629,GO:0007165,GO:0008081,GO:0023034,CC_EC_number:3.1.4.11,CC_EC_number:3.1.4.11,PRODUCT:Phosphoinositide phospholipase C 4,CC_functional_completeness:complete,CC_gene:PLC4,CC_gene:PLC6,CC_gene:PLC2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028423001~ Phosphoinositide phospholipase C 4~ PLC4~ complete;original_location=join(2194721..2195041%2C2195949..2196145%2C2196476..2196611%2C2196692..2196937%2C2197032..2197261%2C2197372..2197489%2C2198003..2198155%2C2198238..2198324%2C2198747..2199046);owner=coffea | |
| 19055 chr1 manual_curation exon 32382098 32382580 . + . Parent=GSCOCT00028423001 | |
| 19056 chr1 manual_curation exon 32383488 32383684 . + . Parent=GSCOCT00028423001 | |
| 19057 chr1 manual_curation exon 32384015 32384150 . + . Parent=GSCOCT00028423001 | |
| 19058 chr1 manual_curation exon 32384231 32384476 . + . Parent=GSCOCT00028423001 | |
| 19059 chr1 manual_curation exon 32384571 32384800 . + . Parent=GSCOCT00028423001 | |
| 19060 chr1 manual_curation exon 32384911 32385028 . + . Parent=GSCOCT00028423001 | |
| 19061 chr1 manual_curation exon 32385542 32385694 . + . Parent=GSCOCT00028423001 | |
| 19062 chr1 manual_curation exon 32385777 32385863 . + . Parent=GSCOCT00028423001 | |
| 19063 chr1 manual_curation exon 32386286 32386854 . + . Parent=GSCOCT00028423001 | |
| 19064 chr1 manual_curation CDS 32382260 32382580 . + 0 Parent=GSCOCT00028423001 | |
| 19065 chr1 manual_curation CDS 32383488 32383684 . + 0 Parent=GSCOCT00028423001 | |
| 19066 chr1 manual_curation CDS 32384015 32384150 . + 2 Parent=GSCOCT00028423001 | |
| 19067 chr1 manual_curation CDS 32384231 32384476 . + 0 Parent=GSCOCT00028423001 | |
| 19068 chr1 manual_curation CDS 32384571 32384800 . + 0 Parent=GSCOCT00028423001 | |
| 19069 chr1 manual_curation CDS 32384911 32385028 . + 2 Parent=GSCOCT00028423001 | |
| 19070 chr1 manual_curation CDS 32385542 32385694 . + 0 Parent=GSCOCT00028423001 | |
| 19071 chr1 manual_curation CDS 32385777 32385863 . + 0 Parent=GSCOCT00028423001 | |
| 19072 chr1 manual_curation CDS 32386286 32386585 . + 0 Parent=GSCOCT00028423001 | |
| 19073 chr1 manual_curation gene 32387330 32389717 . - . ID=GSCOCG00028424001;Name=Cc01_g14280 | |
| 19074 chr1 manual_curation mRNA 32387330 32389717 . - . ID=GSCOCT00028424001;Parent=GSCOCG00028424001;Name=Cc01_g14280 | |
| 19075 chr1 manual_curation polypeptide 32387330 32389717 . - . ID=GSCOCP00028424001;Dbxref=GENE3D:G3DSA:2.130.10.30,InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR009091,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF50985,SUPERFAMILY:SSF56112,SwissProt:O24585,SwissProt:Q9FIJ6,SwissProt:Q9LY50,TAIR:AT3G55950.1,TAIR:AT3G59420.1,TAIR:AT5G47850.1,TrEMBL:B9GIH1,TrEMBL:F6GUR0,TrEMBL:G7KH13;Derives_from=GSCOCT00028424001;Name=Cc01_g14280;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative serine/threonine-protein kinase-like protein CCR3,CC_functional_completeness:complete,CC_gene:CCR3,CC_gene:CCR4,CC_gene:CR4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028424001~ Putative serine/threonine-protein kinase-like protein CCR3~ CCR3~ complete;original_location=complement(2199791..2202178);owner=coffea | |
| 19076 chr1 manual_curation exon 32387330 32389717 . - . Parent=GSCOCT00028424001 | |
| 19077 chr1 manual_curation CDS 32387330 32389717 . - 0 Parent=GSCOCT00028424001 | |
| 19078 chr1 manual_curation gene 32390794 32396239 . - . ID=GSCOCG00028426001;Name=Cc01_g14290 | |
| 19079 chr1 manual_curation mRNA 32390794 32396239 . - . ID=GSCOCT00028426001;Parent=GSCOCG00028426001;Name=Cc01_g14290 | |
| 19080 chr1 manual_curation polypeptide 32390916 32396021 . - . ID=GSCOCP00028426001;Dbxref=GENE3D:G3DSA:4.10.640.10,InterPro:IPR001648,PANTHER:PTHR13479,PFAM:PF01084,PRINTS:PR00974,PRODOM:PD002239,SUPERFAMILY:SSF46911,TAIR:AT1G07210.1,TIGRFAMs:TIGR00165,TrEMBL:B9SPA5,TrEMBL:B9SS74,TrEMBL:D7SJX0;Derives_from=GSCOCT00028426001;Name=Cc01_g14290;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:Putative Ribosomal protein S18,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028426001~ Putative Ribosomal protein S18~ unknown_gene~ complete;original_location=complement(join(2208395..2208482%2C2207186..2207526%2C2204792..2204887%2C2203666..2203725%2C2203377..2203586));owner=coffea | |
| 19081 chr1 manual_curation exon 32396184 32396239 . - . Parent=GSCOCT00028426001 | |
| 19082 chr1 manual_curation exon 32390794 32391125 . - . Parent=GSCOCT00028426001 | |
| 19083 chr1 manual_curation exon 32391205 32391264 . - . Parent=GSCOCT00028426001 | |
| 19084 chr1 manual_curation exon 32392331 32392426 . - . Parent=GSCOCT00028426001 | |
| 19085 chr1 manual_curation exon 32394725 32395065 . - . Parent=GSCOCT00028426001 | |
| 19086 chr1 manual_curation exon 32395934 32396028 . - . Parent=GSCOCT00028426001 | |
| 19087 chr1 manual_curation CDS 32390916 32391125 . - 0 Parent=GSCOCT00028426001 | |
| 19088 chr1 manual_curation CDS 32391205 32391264 . - 0 Parent=GSCOCT00028426001 | |
| 19089 chr1 manual_curation CDS 32392331 32392426 . - 0 Parent=GSCOCT00028426001 | |
| 19090 chr1 manual_curation CDS 32394725 32395065 . - 1 Parent=GSCOCT00028426001 | |
| 19091 chr1 manual_curation CDS 32395934 32396021 . - 0 Parent=GSCOCT00028426001 | |
| 19092 chr1 manual_curation gene 32409160 32417564 . + . ID=GSCOCG00028427001;Name=Cc01_g14300 | |
| 19093 chr1 manual_curation mRNA 32409160 32417564 . + . ID=GSCOCT00028427001;Parent=GSCOCG00028427001;Name=Cc01_g14300 | |
| 19094 chr1 manual_curation polypeptide 32409160 32417564 . + . ID=GSCOCP00028427001;Dbxref=SwissProt:Q889C2,SwissProt:Q88Q71,SwissProt:Q9HVN5,TAIR:AT1G07200.2,TAIR:AT2G29970.1,TAIR:AT2G40130.2,TrEMBL:A5BAL3,TrEMBL:F6GUQ9,TrEMBL:I1MZZ3;Derives_from=GSCOCT00028427001;Name=Cc01_g14300;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein,CC_functional_completeness:complete,CC_gene:clpB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028427001~ Putative Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein~ clpB~ complete;original_location=join(2221621..2222837%2C2224444..2224690%2C2224811..2226668%2C2229419..2229507%2C2229963..2230025);owner=coffea | |
| 19095 chr1 manual_curation exon 32409160 32410376 . + . Parent=GSCOCT00028427001 | |
| 19096 chr1 manual_curation exon 32411983 32412229 . + . Parent=GSCOCT00028427001 | |
| 19097 chr1 manual_curation exon 32412350 32414207 . + . Parent=GSCOCT00028427001 | |
| 19098 chr1 manual_curation exon 32416958 32417046 . + . Parent=GSCOCT00028427001 | |
| 19099 chr1 manual_curation exon 32417502 32417564 . + . Parent=GSCOCT00028427001 | |
| 19100 chr1 manual_curation CDS 32409160 32410376 . + 0 Parent=GSCOCT00028427001 | |
| 19101 chr1 manual_curation CDS 32411983 32412229 . + 2 Parent=GSCOCT00028427001 | |
| 19102 chr1 manual_curation CDS 32412350 32414207 . + 0 Parent=GSCOCT00028427001 | |
| 19103 chr1 manual_curation CDS 32416958 32417046 . + 1 Parent=GSCOCT00028427001 | |
| 19104 chr1 manual_curation CDS 32417502 32417564 . + 0 Parent=GSCOCT00028427001 | |
| 19105 chr1 manual_curation gene 32417641 32419993 . + . ID=GSCOCG00028428001;Name=Cc01_g14310 | |
| 19106 chr1 manual_curation mRNA 32417641 32419993 . + . ID=GSCOCT00028428001;Parent=GSCOCG00028428001;Name=Cc01_g14310 | |
| 19107 chr1 manual_curation polypeptide 32417641 32419626 . + . ID=GSCOCP00028428001;Dbxref=GENE3D:G3DSA:1.25.40.20,InterPro:IPR000571,InterPro:IPR002110,InterPro:IPR020683,PFAM:PF00023,PFAM:PF00642,PROFILE:PS50088,PROFILE:PS50103,PROFILE:PS50297,SMART:SM00248,SMART:SM00356,SUPERFAMILY:SSF48403,SwissProt:Q93ZS9,SwissProt:Q9LUZ4,SwissProt:Q9XEE6,TAIR:AT2G40140.1,TAIR:AT3G55980.1,TAIR:AT5G58620.1,TrEMBL:A5BAL2,TrEMBL:B9GIG9,TrEMBL:B9SI36;Derives_from=GSCOCT00028428001;Name=Cc01_g14310;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Zinc finger CCCH domain-containing protein 66,CC_functional_completeness:complete,CC_gene:At5g58620,CC_gene:At2g40140,CC_gene:At3g55980;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028428001~ Zinc finger CCCH domain-containing protein 66~ At5g58620~ complete;original_location=2230102..2232087;owner=coffea | |
| 19108 chr1 manual_curation exon 32417641 32419993 . + . Parent=GSCOCT00028428001 | |
| 19109 chr1 manual_curation CDS 32417641 32419626 . + 0 Parent=GSCOCT00028428001 | |
| 19110 chr1 manual_curation gene 32425277 32426771 . - . ID=GSCOCG00028429001;Name=Cc01_g14320 | |
| 19111 chr1 manual_curation mRNA 32425277 32426771 . - . ID=GSCOCT00028429001;Parent=GSCOCG00028429001;Name=Cc01_g14320 | |
| 19112 chr1 manual_curation polypeptide 32425277 32426771 . - . ID=GSCOCP00028429001;Dbxref=TAIR:AT5G58630.1,TrEMBL:A5BAL1,TrEMBL:B9HP29,TrEMBL:B9SI37;Derives_from=GSCOCT00028429001;Name=Cc01_g14320;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B Has 1807 Blast hits to 1807 proteins in 277 species,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028429001~ Putative unknown protein%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(2238251..2239232%2C2237738..2238126));owner=coffea | |
| 19113 chr1 manual_curation exon 32425277 32425665 . - . Parent=GSCOCT00028429001 | |
| 19114 chr1 manual_curation exon 32425790 32426771 . - . Parent=GSCOCT00028429001 | |
| 19115 chr1 manual_curation CDS 32425277 32425665 . - 1 Parent=GSCOCT00028429001 | |
| 19116 chr1 manual_curation CDS 32425790 32426771 . - 0 Parent=GSCOCT00028429001 | |
| 19117 chr1 manual_curation gene 32429411 32433832 . - . ID=GSCOCG00028430001;Name=Cc01_g14330 | |
| 19118 chr1 manual_curation mRNA 32429411 32433832 . - . ID=GSCOCT00028430001;Parent=GSCOCG00028430001;Name=Cc01_g14330 | |
| 19119 chr1 manual_curation polypeptide 32429728 32433669 . - . ID=GSCOCP00028430001;Dbxref=InterPro:IPR005804,InterPro:IPR021863,PFAM:PF00487,PFAM:PF11960,SwissProt:P48620,SwissProt:P48622,SwissProt:P48626,TAIR:AT2G29980.1,TAIR:AT3G11170.1,TAIR:AT5G05580.1,TrEMBL:F6GUQ6,TrEMBL:Q0PMN6,TrEMBL:Q8H1X7;Derives_from=GSCOCT00028430001;Name=Cc01_g14330;Ontology_term=CC_evidence_code:ISS,GO:0006629,GO:0016491,GO:0055114,CC_EC_number:1.14.99.33,PRODUCT:Omega-3 fatty acid desaturase%2C endoplasmic reticulum,CC_functional_completeness:complete,CC_gene:FAD3,CC_gene:FAD8,CC_gene:FAD7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028430001~ Omega-3 fatty acid desaturase%2C endoplasmic reticulum~ FAD3~ complete;original_location=complement(join(2246121..2246130%2C2244181..2244568%2C2243979..2244068%2C2243808..2243874%2C2243421..2243513%2C2243142..2243327%2C2242964..2243044%2C2242523..2242660%2C2242189..2242383));owner=coffea | |
| 19120 chr1 manual_curation exon 32429411 32429922 . - . Parent=GSCOCT00028430001 | |
| 19121 chr1 manual_curation exon 32430062 32430199 . - . Parent=GSCOCT00028430001 | |
| 19122 chr1 manual_curation exon 32430503 32430583 . - . Parent=GSCOCT00028430001 | |
| 19123 chr1 manual_curation exon 32430681 32430866 . - . Parent=GSCOCT00028430001 | |
| 19124 chr1 manual_curation exon 32430960 32431052 . - . Parent=GSCOCT00028430001 | |
| 19125 chr1 manual_curation exon 32431347 32431413 . - . Parent=GSCOCT00028430001 | |
| 19126 chr1 manual_curation exon 32431518 32431607 . - . Parent=GSCOCT00028430001 | |
| 19127 chr1 manual_curation exon 32431720 32432107 . - . Parent=GSCOCT00028430001 | |
| 19128 chr1 manual_curation exon 32433660 32433832 . - . Parent=GSCOCT00028430001 | |
| 19129 chr1 manual_curation CDS 32429728 32429922 . - 0 Parent=GSCOCT00028430001 | |
| 19130 chr1 manual_curation CDS 32430062 32430199 . - 0 Parent=GSCOCT00028430001 | |
| 19131 chr1 manual_curation CDS 32430503 32430583 . - 0 Parent=GSCOCT00028430001 | |
| 19132 chr1 manual_curation CDS 32430681 32430866 . - 0 Parent=GSCOCT00028430001 | |
| 19133 chr1 manual_curation CDS 32430960 32431052 . - 0 Parent=GSCOCT00028430001 | |
| 19134 chr1 manual_curation CDS 32431347 32431413 . - 2 Parent=GSCOCT00028430001 | |
| 19135 chr1 manual_curation CDS 32431518 32431607 . - 2 Parent=GSCOCT00028430001 | |
| 19136 chr1 manual_curation CDS 32431720 32432107 . - 1 Parent=GSCOCT00028430001 | |
| 19137 chr1 manual_curation CDS 32433660 32433669 . - 0 Parent=GSCOCT00028430001 | |
| 19138 chr1 manual_curation gene 32438812 32439707 . + . ID=GSCOCG00028431001;Name=Cc01_g14340 | |
| 19139 chr1 manual_curation mRNA 32438812 32439707 . + . ID=GSCOCT00028431001;Parent=GSCOCG00028431001;Name=Cc01_g14340 | |
| 19140 chr1 manual_curation polypeptide 32438812 32439015 . + . ID=GSCOCP00028431001;Derives_from=GSCOCT00028431001;Name=Cc01_g14340;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028431001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=2251273..2251476;owner=coffea | |
| 19141 chr1 manual_curation exon 32438812 32439707 . + . Parent=GSCOCT00028431001 | |
| 19142 chr1 manual_curation CDS 32438812 32439015 . + 0 Parent=GSCOCT00028431001 | |
| 19143 chr1 manual_curation gene 32439800 32445703 . - . ID=GSCOCG00028432001;Name=Cc01_g14350 | |
| 19144 chr1 manual_curation mRNA 32439800 32445703 . - . ID=GSCOCT00028432001;Parent=GSCOCG00028432001;Name=Cc01_g14350 | |
| 19145 chr1 manual_curation polypeptide 32439800 32445541 . - . ID=GSCOCP00028432001;Dbxref=GENE3D:G3DSA:1.25.10.10,InterPro:IPR000225,InterPro:IPR003613,InterPro:IPR011989,InterPro:IPR016024,PFAM:PF04564,SMART:SM00185,SMART:SM00504,SUPERFAMILY:SSF48371,SwissProt:Q9CAA7,SwissProt:Q9LM76,SwissProt:Q9SFX2,TAIR:AT1G20780.1,TAIR:AT1G68940.3,TAIR:AT1G76390.1,TrEMBL:A5ASE1,TrEMBL:D7SJW4,TrEMBL:I1MZY9;Derives_from=GSCOCT00028432001;Name=Cc01_g14350;Ontology_term=CC_evidence_code:ISS,GO:0000151,GO:0004842,GO:0005488,GO:0016567,CC_EC_number:missing_EC_number,PRODUCT:Putative U-box domain-containing protein 43,CC_functional_completeness:modules,CC_gene:PUB43,CC_gene:PUB44,CC_gene:PUB42;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028432001~ Putative U-box domain-containing protein 43~ PUB43~ modules;original_location=complement(join(2257556..2258002%2C2256244..2257035%2C2255067..2255373%2C2253775..2254239%2C2252261..2253372));owner=coffea | |
| 19146 chr1 manual_curation exon 32439800 32440911 . - . Parent=GSCOCT00028432001 | |
| 19147 chr1 manual_curation exon 32441314 32441778 . - . Parent=GSCOCT00028432001 | |
| 19148 chr1 manual_curation exon 32442606 32442912 . - . Parent=GSCOCT00028432001 | |
| 19149 chr1 manual_curation exon 32443783 32444574 . - . Parent=GSCOCT00028432001 | |
| 19150 chr1 manual_curation exon 32445095 32445703 . - . Parent=GSCOCT00028432001 | |
| 19151 chr1 manual_curation CDS 32439800 32440911 . - 1 Parent=GSCOCT00028432001 | |
| 19152 chr1 manual_curation CDS 32441314 32441778 . - 1 Parent=GSCOCT00028432001 | |
| 19153 chr1 manual_curation CDS 32442606 32442912 . - 0 Parent=GSCOCT00028432001 | |
| 19154 chr1 manual_curation CDS 32443783 32444574 . - 0 Parent=GSCOCT00028432001 | |
| 19155 chr1 manual_curation CDS 32445095 32445541 . - 0 Parent=GSCOCT00028432001 | |
| 19156 chr1 manual_curation gene 32446719 32450979 . - . ID=GSCOCG00028434001;Name=Cc01_g14360 | |
| 19157 chr1 manual_curation mRNA 32446719 32450979 . - . ID=GSCOCT00028434001;Parent=GSCOCG00028434001;Name=Cc01_g14360 | |
| 19158 chr1 manual_curation polypeptide 32447102 32450741 . - . ID=GSCOCP00028434001;Dbxref=InterPro:IPR001327,InterPro:IPR013027,PFAM:PF00070,PFAM:PF07992,SwissProt:O14121,SwissProt:O43090,SwissProt:Q55CD9,TAIR:AT1G07180.1,TAIR:AT2G29990.1,TAIR:AT4G28220.1,TrEMBL:A9PHN0,TrEMBL:I1LLL3,TrEMBL:Q9ST63;Derives_from=GSCOCT00028434001;Name=Cc01_g14360;Ontology_term=CC_evidence_code:ISS,GO:0016491,GO:0050660,GO:0055114,CC_EC_number:1.6.99.3,PRODUCT:Putative Probable NADH dehydrogenase,CC_functional_completeness:complete,CC_gene:DDB_G0270104,CC_gene:SPBC947.15c,CC_gene:SPAC3A11.07;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028434001~ Putative Probable NADH dehydrogenase~ DDB_G0270104~ complete;original_location=complement(join(2263081..2263202%2C2262699..2263020%2C2262331..2262544%2C2262072..2262232%2C2261829..2261894%2C2261416..2261579%2C2260877..2260991%2C2259813..2259992%2C2259563..2259715));owner=coffea | |
| 19159 chr1 manual_curation exon 32446719 32447254 . - . Parent=GSCOCT00028434001 | |
| 19160 chr1 manual_curation exon 32447352 32447531 . - . Parent=GSCOCT00028434001 | |
| 19161 chr1 manual_curation exon 32448416 32448530 . - . Parent=GSCOCT00028434001 | |
| 19162 chr1 manual_curation exon 32448955 32449118 . - . Parent=GSCOCT00028434001 | |
| 19163 chr1 manual_curation exon 32449368 32449433 . - . Parent=GSCOCT00028434001 | |
| 19164 chr1 manual_curation exon 32449611 32449771 . - . Parent=GSCOCT00028434001 | |
| 19165 chr1 manual_curation exon 32449870 32450083 . - . Parent=GSCOCT00028434001 | |
| 19166 chr1 manual_curation exon 32450238 32450559 . - . Parent=GSCOCT00028434001 | |
| 19167 chr1 manual_curation exon 32450620 32450979 . - . Parent=GSCOCT00028434001 | |
| 19168 chr1 manual_curation CDS 32447102 32447254 . - 0 Parent=GSCOCT00028434001 | |
| 19169 chr1 manual_curation CDS 32447352 32447531 . - 0 Parent=GSCOCT00028434001 | |
| 19170 chr1 manual_curation CDS 32448416 32448530 . - 2 Parent=GSCOCT00028434001 | |
| 19171 chr1 manual_curation CDS 32448955 32449118 . - 0 Parent=GSCOCT00028434001 | |
| 19172 chr1 manual_curation CDS 32449368 32449433 . - 0 Parent=GSCOCT00028434001 | |
| 19173 chr1 manual_curation CDS 32449611 32449771 . - 1 Parent=GSCOCT00028434001 | |
| 19174 chr1 manual_curation CDS 32449870 32450083 . - 0 Parent=GSCOCT00028434001 | |
| 19175 chr1 manual_curation CDS 32450238 32450559 . - 2 Parent=GSCOCT00028434001 | |
| 19176 chr1 manual_curation CDS 32450620 32450741 . - 0 Parent=GSCOCT00028434001 | |
| 19177 chr1 manual_curation gene 32463811 32465783 . - . ID=GSCOCG00028435001;Name=Cc01_g14370 | |
| 19178 chr1 manual_curation mRNA 32463811 32465783 . - . ID=GSCOCT00028435001;Parent=GSCOCG00028435001;Name=Cc01_g14370 | |
| 19179 chr1 manual_curation polypeptide 32463811 32464143 . - . ID=GSCOCP00028435001;Dbxref=InterPro:IPR005345,PANTHER:PTHR13120,PFAM:PF03660,PIR:PIRSF016468,SwissProt:P0DI19,SwissProt:P83871,SwissProt:Q0WMV8,TAIR:AT1G07170.1,TAIR:AT2G30000.1,TrEMBL:B6T4K0,TrEMBL:Q01K32,TrEMBL:Q7XM15;Derives_from=GSCOCT00028435001;Name=Cc01_g14370;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:PHD finger-like domain-containing protein 5B,CC_functional_completeness:complete,CC_gene:At1g07170,CC_gene:At2g30000,CC_gene:Phf5a;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028435001~ PHD finger-like domain-containing protein 5B~ At1g07170~ complete;original_location=complement(2276272..2276604);owner=coffea | |
| 19180 chr1 manual_curation exon 32465391 32465783 . - . Parent=GSCOCT00028435001 | |
| 19181 chr1 manual_curation exon 32463811 32464186 . - . Parent=GSCOCT00028435001 | |
| 19182 chr1 manual_curation CDS 32463811 32464143 . - 0 Parent=GSCOCT00028435001 | |
| 19183 chr1 manual_curation gene 32468741 32471613 . + . ID=GSCOCG00028436001;Name=Cc01_g14380 | |
| 19184 chr1 manual_curation mRNA 32468741 32471613 . + . ID=GSCOCT00028436001;Parent=GSCOCG00028436001;Name=Cc01_g14380 | |
| 19185 chr1 manual_curation polypeptide 32468823 32471069 . + . ID=GSCOCP00028436001;Dbxref=InterPro:IPR002283,InterPro:IPR005123,PFAM:PF03171,PRINTS:PR00682,SwissProt:O49561,SwissProt:Q9C6I4,SwissProt:Q9LSW7,TAIR:AT3G47190.1,TAIR:AT4G21200.1,TAIR:AT5G58660.1,TrEMBL:A9PHC3,TrEMBL:D7SJW0,TrEMBL:I1LLL6;Derives_from=GSCOCT00028436001;Name=Cc01_g14380;Ontology_term=CC_evidence_code:ISS,GO:0005506,GO:0016491,GO:0055114,CC_EC_number:1.14.11.9,PRODUCT:Putative Gibberellin 2-beta-dioxygenase 8,CC_functional_completeness:complete,CC_gene:GA2OX7,CC_gene:At5g43440;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028436001~ Putative Gibberellin 2-beta-dioxygenase 8~ GA2OX7~ complete;original_location=join(2281284..2281747%2C2282804..2283131%2C2283300..2283530);owner=coffea | |
| 19186 chr1 manual_curation exon 32468741 32469286 . + . Parent=GSCOCT00028436001 | |
| 19187 chr1 manual_curation exon 32470343 32470670 . + . Parent=GSCOCT00028436001 | |
| 19188 chr1 manual_curation exon 32470839 32471613 . + . Parent=GSCOCT00028436001 | |
| 19189 chr1 manual_curation CDS 32468823 32469286 . + 0 Parent=GSCOCT00028436001 | |
| 19190 chr1 manual_curation CDS 32470343 32470670 . + 2 Parent=GSCOCT00028436001 | |
| 19191 chr1 manual_curation CDS 32470839 32471069 . + 0 Parent=GSCOCT00028436001 | |
| 19192 chr1 manual_curation gene 32474753 32480289 . + . ID=GSCOCG00028437001;Name=Cc01_g14390 | |
| 19193 chr1 manual_curation mRNA 32474753 32480289 . + . ID=GSCOCT00028437001;Parent=GSCOCG00028437001;Name=Cc01_g14390 | |
| 19194 chr1 manual_curation polypeptide 32474829 32480289 . + . ID=GSCOCP00028437001;Dbxref=InterPro:IPR000182,InterPro:IPR001965,InterPro:IPR008395,InterPro:IPR011011,InterPro:IPR014002,InterPro:IPR016181,InterPro:IPR019787,PFAM:PF00628,PFAM:PF05641,PROFILE:PS50016,PROFILE:PS51186,SMART:SM00249,SMART:SM00743,SUPERFAMILY:SSF55729,SUPERFAMILY:SSF57903,TAIR:AT1G05380.1,TAIR:AT3G14980.1,TAIR:AT5G58610.1,TrEMBL:F6GUQ3,TrEMBL:F6GUQ4,TrEMBL:I1LLM4;Derives_from=GSCOCT00028437001;Name=Cc01_g14390;Ontology_term=CC_evidence_code:ISS,GO:0003723,GO:0005515,GO:0008080,GO:0008152,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:PHD finger transcription factor%2C putative,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028437001~ PHD finger transcription factor%2C putative~ unknown_gene~ complete;original_location=join(2287290..2287379%2C2288061..2289792%2C2289871..2290652%2C2290742..2290871%2C2290994..2291082%2C2291485..2291729%2C2291892..2291978%2C2292065..2292164%2C2292303..2292519%2C2292587..2292750);owner=coffea | |
| 19195 chr1 manual_curation exon 32474753 32474918 . + . Parent=GSCOCT00028437001 | |
| 19196 chr1 manual_curation exon 32475600 32477331 . + . Parent=GSCOCT00028437001 | |
| 19197 chr1 manual_curation exon 32477410 32478191 . + . Parent=GSCOCT00028437001 | |
| 19198 chr1 manual_curation exon 32478281 32478410 . + . Parent=GSCOCT00028437001 | |
| 19199 chr1 manual_curation exon 32478533 32478621 . + . Parent=GSCOCT00028437001 | |
| 19200 chr1 manual_curation exon 32479024 32479268 . + . Parent=GSCOCT00028437001 | |
| 19201 chr1 manual_curation exon 32479431 32479517 . + . Parent=GSCOCT00028437001 | |
| 19202 chr1 manual_curation exon 32479604 32479703 . + . Parent=GSCOCT00028437001 | |
| 19203 chr1 manual_curation exon 32479842 32480058 . + . Parent=GSCOCT00028437001 | |
| 19204 chr1 manual_curation exon 32480126 32480289 . + . Parent=GSCOCT00028437001 | |
| 19205 chr1 manual_curation CDS 32474829 32474918 . + 0 Parent=GSCOCT00028437001 | |
| 19206 chr1 manual_curation CDS 32475600 32477331 . + 0 Parent=GSCOCT00028437001 | |
| 19207 chr1 manual_curation CDS 32477410 32478191 . + 1 Parent=GSCOCT00028437001 | |
| 19208 chr1 manual_curation CDS 32478281 32478410 . + 0 Parent=GSCOCT00028437001 | |
| 19209 chr1 manual_curation CDS 32478533 32478621 . + 1 Parent=GSCOCT00028437001 | |
| 19210 chr1 manual_curation CDS 32479024 32479268 . + 0 Parent=GSCOCT00028437001 | |
| 19211 chr1 manual_curation CDS 32479431 32479517 . + 2 Parent=GSCOCT00028437001 | |
| 19212 chr1 manual_curation CDS 32479604 32479703 . + 2 Parent=GSCOCT00028437001 | |
| 19213 chr1 manual_curation CDS 32479842 32480058 . + 0 Parent=GSCOCT00028437001 | |
| 19214 chr1 manual_curation CDS 32480126 32480289 . + 1 Parent=GSCOCT00028437001 | |
| 19215 chr1 manual_curation gene 32480668 32481360 . + . ID=GSCOCG00028438001;Name=Cc01_g14400 | |
| 19216 chr1 manual_curation mRNA 32480668 32481360 . + . ID=GSCOCT00028438001;Parent=GSCOCG00028438001;Name=Cc01_g14400 | |
| 19217 chr1 manual_curation polypeptide 32480668 32481050 . + . ID=GSCOCP00028438001;Derives_from=GSCOCT00028438001;Name=Cc01_g14400;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028438001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(2293129..2293221%2C2293311..2293511);owner=coffea | |
| 19218 chr1 manual_curation exon 32480668 32480760 . + . Parent=GSCOCT00028438001 | |
| 19219 chr1 manual_curation exon 32480850 32481360 . + . Parent=GSCOCT00028438001 | |
| 19220 chr1 manual_curation CDS 32480668 32480760 . + 0 Parent=GSCOCT00028438001 | |
| 19221 chr1 manual_curation CDS 32480850 32481050 . + 0 Parent=GSCOCT00028438001 | |
| 19222 chr1 manual_curation gene 32483138 32487330 . + . ID=GSCOCG00028439001;Name=Cc01_g14410 | |
| 19223 chr1 manual_curation mRNA 32483138 32487330 . + . ID=GSCOCT00028439001;Parent=GSCOCG00028439001;Name=Cc01_g14410 | |
| 19224 chr1 manual_curation polypeptide 32483422 32486687 . + . ID=GSCOCP00028439001;Dbxref=InterPro:IPR004253,PFAM:PF03005,TAIR:AT1G29050.1,TAIR:AT2G30010.1,TAIR:AT5G58600.1,TrEMBL:B9HNE1,TrEMBL:B9SK62,TrEMBL:I1MZY2;Derives_from=GSCOCT00028439001;Name=Cc01_g14410;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Plant protein of unknown function (DUF828),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028439001~ Plant protein of unknown function (DUF828)~ unknown_gene~ complete;original_location=join(2295883..2296067%2C2296221..2296392%2C2296547..2296725%2C2296900..2297058%2C2298818..2299148);owner=coffea | |
| 19225 chr1 manual_curation exon 32483138 32483606 . + . Parent=GSCOCT00028439001 | |
| 19226 chr1 manual_curation exon 32483760 32483931 . + . Parent=GSCOCT00028439001 | |
| 19227 chr1 manual_curation exon 32484086 32484264 . + . Parent=GSCOCT00028439001 | |
| 19228 chr1 manual_curation exon 32484439 32484597 . + . Parent=GSCOCT00028439001 | |
| 19229 chr1 manual_curation exon 32486357 32487330 . + . Parent=GSCOCT00028439001 | |
| 19230 chr1 manual_curation CDS 32483422 32483606 . + 0 Parent=GSCOCT00028439001 | |
| 19231 chr1 manual_curation CDS 32483760 32483931 . + 2 Parent=GSCOCT00028439001 | |
| 19232 chr1 manual_curation CDS 32484086 32484264 . + 0 Parent=GSCOCT00028439001 | |
| 19233 chr1 manual_curation CDS 32484439 32484597 . + 2 Parent=GSCOCT00028439001 | |
| 19234 chr1 manual_curation CDS 32486357 32486687 . + 2 Parent=GSCOCT00028439001 | |
| 19235 chr1 manual_curation gene 32488359 32492459 . - . ID=GSCOCG00028440001;Name=Cc01_g14420 | |
| 19236 chr1 manual_curation mRNA 32488359 32492459 . - . ID=GSCOCT00028440001;Parent=GSCOCG00028440001;Name=Cc01_g14420 | |
| 19237 chr1 manual_curation polypeptide 32488653 32492108 . - . ID=GSCOCP00028440001;Dbxref=GENE3D:G3DSA:3.40.50.620,InterPro:IPR001962,InterPro:IPR006426,InterPro:IPR014729,InterPro:IPR017932,PFAM:PF00733,PROFILE:PS51278,SwissProt:O24661,SwissProt:P31752,SwissProt:P49078,TAIR:AT3G47340.1,TAIR:AT5G10240.1,TAIR:AT5G65010.2,TIGRFAMs:TIGR01536,TrEMBL:D7SJV6,TrEMBL:G3G8K0,TrEMBL:Q9SP20;Derives_from=GSCOCT00028440001;Name=Cc01_g14420;Ontology_term=CC_evidence_code:ISS,GO:0004066,GO:0006529,CC_EC_number:6.3.5.4,PRODUCT:Asparagine synthetase [glutamine-hydrolyzing],CC_functional_completeness:complete,CC_gene:AS,CC_gene:ASN1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028440001~ Asparagine synthetase [glutamine-hydrolyzing]~ AS~ complete;original_location=complement(join(2304439..2304569%2C2303773..2303911%2C2303555..2303650%2C2303329..2303470%2C2303037..2303227%2C2302731..2302892%2C2302566..2302646%2C2302225..2302446%2C2302004..2302138%2C2301842..2301922%2C2301665..2301751%2C2301465..2301572%2C2301114..2301359));owner=coffea | |
| 19238 chr1 manual_curation exon 32488359 32488898 . - . Parent=GSCOCT00028440001 | |
| 19239 chr1 manual_curation exon 32489004 32489111 . - . Parent=GSCOCT00028440001 | |
| 19240 chr1 manual_curation exon 32489204 32489290 . - . Parent=GSCOCT00028440001 | |
| 19241 chr1 manual_curation exon 32489381 32489461 . - . Parent=GSCOCT00028440001 | |
| 19242 chr1 manual_curation exon 32489543 32489677 . - . Parent=GSCOCT00028440001 | |
| 19243 chr1 manual_curation exon 32489764 32489985 . - . Parent=GSCOCT00028440001 | |
| 19244 chr1 manual_curation exon 32490105 32490185 . - . Parent=GSCOCT00028440001 | |
| 19245 chr1 manual_curation exon 32490270 32490431 . - . Parent=GSCOCT00028440001 | |
| 19246 chr1 manual_curation exon 32490576 32490766 . - . Parent=GSCOCT00028440001 | |
| 19247 chr1 manual_curation exon 32490868 32491009 . - . Parent=GSCOCT00028440001 | |
| 19248 chr1 manual_curation exon 32491094 32491189 . - . Parent=GSCOCT00028440001 | |
| 19249 chr1 manual_curation exon 32491312 32491450 . - . Parent=GSCOCT00028440001 | |
| 19250 chr1 manual_curation exon 32491978 32492459 . - . Parent=GSCOCT00028440001 | |
| 19251 chr1 manual_curation CDS 32488653 32488898 . - 0 Parent=GSCOCT00028440001 | |
| 19252 chr1 manual_curation CDS 32489004 32489111 . - 0 Parent=GSCOCT00028440001 | |
| 19253 chr1 manual_curation CDS 32489204 32489290 . - 0 Parent=GSCOCT00028440001 | |
| 19254 chr1 manual_curation CDS 32489381 32489461 . - 0 Parent=GSCOCT00028440001 | |
| 19255 chr1 manual_curation CDS 32489543 32489677 . - 0 Parent=GSCOCT00028440001 | |
| 19256 chr1 manual_curation CDS 32489764 32489985 . - 0 Parent=GSCOCT00028440001 | |
| 19257 chr1 manual_curation CDS 32490105 32490185 . - 0 Parent=GSCOCT00028440001 | |
| 19258 chr1 manual_curation CDS 32490270 32490431 . - 0 Parent=GSCOCT00028440001 | |
| 19259 chr1 manual_curation CDS 32490576 32490766 . - 1 Parent=GSCOCT00028440001 | |
| 19260 chr1 manual_curation CDS 32490868 32491009 . - 0 Parent=GSCOCT00028440001 | |
| 19261 chr1 manual_curation CDS 32491094 32491189 . - 0 Parent=GSCOCT00028440001 | |
| 19262 chr1 manual_curation CDS 32491312 32491450 . - 2 Parent=GSCOCT00028440001 | |
| 19263 chr1 manual_curation CDS 32491978 32492108 . - 0 Parent=GSCOCT00028440001 | |
| 19264 chr1 manual_curation gene 32501461 32503673 . + . ID=GSCOCG00028442001;Name=Cc01_g14430 | |
| 19265 chr1 manual_curation mRNA 32501461 32503673 . + . ID=GSCOCT00028442001;Parent=GSCOCG00028442001;Name=Cc01_g14430 | |
| 19266 chr1 manual_curation polypeptide 32501564 32503338 . + . ID=GSCOCP00028442001;Dbxref=GENE3D:G3DSA:3.60.40.10,InterPro:IPR001932,InterPro:IPR014045,InterPro:IPR015655,PANTHER:PTHR13832,PFAM:PF00481,SMART:SM00331,SMART:SM00332,SUPERFAMILY:SSF81606,SwissProt:O80871,SwissProt:Q8RX37,SwissProt:Q9XEE8,TAIR:AT1G07160.1,TAIR:AT2G30020.1,TAIR:AT2G40180.1,TrEMBL:B9GGP6,TrEMBL:F6GUQ2,TrEMBL:Q3V656;Derives_from=GSCOCT00028442001;Name=Cc01_g14430;Ontology_term=CC_evidence_code:ISS,GO:0003824,CC_EC_number:3.1.3.16,PRODUCT:Probable protein phosphatase 2C 25,CC_functional_completeness:complete,CC_gene:At2g30020,CC_gene:At1g07160,CC_gene:PP2C5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028442001~ Probable protein phosphatase 2C 25~ At2g30020~ complete;original_location=join(2314025..2314483%2C2314896..2315234%2C2315347..2315526%2C2315638..2315799);owner=coffea | |
| 19267 chr1 manual_curation exon 32501461 32502022 . + . Parent=GSCOCT00028442001 | |
| 19268 chr1 manual_curation exon 32502435 32502773 . + . Parent=GSCOCT00028442001 | |
| 19269 chr1 manual_curation exon 32502886 32503065 . + . Parent=GSCOCT00028442001 | |
| 19270 chr1 manual_curation exon 32503177 32503673 . + . Parent=GSCOCT00028442001 | |
| 19271 chr1 manual_curation CDS 32501564 32502022 . + 0 Parent=GSCOCT00028442001 | |
| 19272 chr1 manual_curation CDS 32502435 32502773 . + 0 Parent=GSCOCT00028442001 | |
| 19273 chr1 manual_curation CDS 32502886 32503065 . + 0 Parent=GSCOCT00028442001 | |
| 19274 chr1 manual_curation CDS 32503177 32503338 . + 0 Parent=GSCOCT00028442001 | |
| 19275 chr1 manual_curation gene 32510522 32512207 . + . ID=GSCOCG00028443001;Name=Cc01_g14440 | |
| 19276 chr1 manual_curation mRNA 32510522 32512207 . + . ID=GSCOCT00028443001;Parent=GSCOCG00028443001;Name=Cc01_g14440 | |
| 19277 chr1 manual_curation polypeptide 32510522 32512207 . + . ID=GSCOCP00028443001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:P28829,SwissProt:Q54R82,SwissProt:Q9FZ36,TAIR:AT1G07150.1,TAIR:AT2G30040.1,TAIR:AT2G32510.1,TrEMBL:A5AVZ4,TrEMBL:B9HND8,TrEMBL:F6GUQ1;Derives_from=GSCOCT00028443001;Name=Cc01_g14440;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:modules,CC_gene:mkkA,CC_gene:ANP2,CC_gene:byr2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028443001~ Putative uncharacterized protein~ mkkA~ modules;original_location=2322983..2324668;owner=coffea | |
| 19278 chr1 manual_curation exon 32510522 32512207 . + . Parent=GSCOCT00028443001 | |
| 19279 chr1 manual_curation CDS 32510522 32512207 . + 0 Parent=GSCOCT00028443001 | |
| 19280 chr1 manual_curation gene 32518772 32522748 . + . ID=GSCOCG00028444001;Name=Cc01_g14450 | |
| 19281 chr1 manual_curation mRNA 32518772 32522748 . + . ID=GSCOCT00028444001;Parent=GSCOCG00028444001;Name=Cc01_g14450 | |
| 19282 chr1 manual_curation polypeptide 32519024 32522265 . + . ID=GSCOCP00028444001;Dbxref=GENE3D:G3DSA:3.90.230.10,InterPro:IPR000994,InterPro:IPR001714,InterPro:IPR004545,PANTHER:PTHR10804,PFAM:PF00557,PRINTS:PR00599,SUPERFAMILY:SSF55920,SwissProt:P50580,SwissProt:Q1ZXG4,SwissProt:Q9UQ80,TAIR:AT2G44180.1,TAIR:AT3G51800.2,TAIR:AT3G59990.1,TIGRFAMs:TIGR00495,TrEMBL:A0FH76,TrEMBL:B9SWY5,TrEMBL:D7SRG7;Derives_from=GSCOCT00028444001;Name=Cc01_g14450;Ontology_term=CC_evidence_code:ISS,GO:0004177,GO:0006508,GO:0008235,GO:0009987,CC_EC_number:3.4.11.18,PRODUCT:Proliferation-associated protein 2G4,CC_functional_completeness:complete,CC_gene:PA2G4,CC_gene:Pa2g4,CC_gene:prlA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028444001~ Proliferation-associated protein 2G4~ PA2G4~ complete;original_location=join(2331485..2331575%2C2331767..2331851%2C2331948..2332097%2C2332254..2332407%2C2333483..2333698%2C2333783..2333919%2C2334031..2334122%2C2334238..2334420%2C2334650..2334726);owner=coffea | |
| 19283 chr1 manual_curation exon 32518772 32518896 . + . Parent=GSCOCT00028444001 | |
| 19284 chr1 manual_curation exon 32519008 32519114 . + . Parent=GSCOCT00028444001 | |
| 19285 chr1 manual_curation exon 32519306 32519390 . + . Parent=GSCOCT00028444001 | |
| 19286 chr1 manual_curation exon 32519487 32519636 . + . Parent=GSCOCT00028444001 | |
| 19287 chr1 manual_curation exon 32519793 32519946 . + . Parent=GSCOCT00028444001 | |
| 19288 chr1 manual_curation exon 32521022 32521237 . + . Parent=GSCOCT00028444001 | |
| 19289 chr1 manual_curation exon 32521322 32521458 . + . Parent=GSCOCT00028444001 | |
| 19290 chr1 manual_curation exon 32521570 32521661 . + . Parent=GSCOCT00028444001 | |
| 19291 chr1 manual_curation exon 32521777 32521959 . + . Parent=GSCOCT00028444001 | |
| 19292 chr1 manual_curation exon 32522189 32522748 . + . Parent=GSCOCT00028444001 | |
| 19293 chr1 manual_curation CDS 32519024 32519114 . + 0 Parent=GSCOCT00028444001 | |
| 19294 chr1 manual_curation CDS 32519306 32519390 . + 1 Parent=GSCOCT00028444001 | |
| 19295 chr1 manual_curation CDS 32519487 32519636 . + 2 Parent=GSCOCT00028444001 | |
| 19296 chr1 manual_curation CDS 32519793 32519946 . + 2 Parent=GSCOCT00028444001 | |
| 19297 chr1 manual_curation CDS 32521022 32521237 . + 0 Parent=GSCOCT00028444001 | |
| 19298 chr1 manual_curation CDS 32521322 32521458 . + 0 Parent=GSCOCT00028444001 | |
| 19299 chr1 manual_curation CDS 32521570 32521661 . + 2 Parent=GSCOCT00028444001 | |
| 19300 chr1 manual_curation CDS 32521777 32521959 . + 1 Parent=GSCOCT00028444001 | |
| 19301 chr1 manual_curation CDS 32522189 32522265 . + 1 Parent=GSCOCT00028444001 | |
| 19302 chr1 manual_curation gene 32523667 32527068 . + . ID=GSCOCG00028445001;Name=Cc01_g14460 | |
| 19303 chr1 manual_curation mRNA 32523667 32527068 . + . ID=GSCOCT00028445001;Parent=GSCOCG00028445001;Name=Cc01_g14460 | |
| 19304 chr1 manual_curation polypeptide 32523979 32526659 . + . ID=GSCOCP00028445001;Dbxref=GENE3D:G3DSA:2.30.29.30,InterPro:IPR000156,InterPro:IPR011993,PFAM:PF00638,PROFILE:PS50196,SMART:SM00160,SwissProt:P92985,SwissProt:Q8RWG8,SwissProt:Q9LMK7,TAIR:AT1G07140.1,TAIR:AT2G30060.1,TAIR:AT5G58590.1,TrEMBL:B9HND6,TrEMBL:F6GUQ0,TrEMBL:I1NH59;Derives_from=GSCOCT00028445001;Name=Cc01_g14460;Ontology_term=CC_evidence_code:ISS,GO:0046907,CC_EC_number:missing_EC_number,PRODUCT:Ran-binding protein 1 homolog b,CC_functional_completeness:complete,CC_gene:RANBP1B,CC_gene:RANBP1C,CC_gene:RANBP1A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028445001~ Ran-binding protein 1 homolog b~ RANBP1B~ complete;original_location=join(2336440..2336591%2C2336719..2336870%2C2336988..2337113%2C2338888..2339120);owner=coffea | |
| 19305 chr1 manual_curation exon 32523667 32524130 . + . Parent=GSCOCT00028445001 | |
| 19306 chr1 manual_curation exon 32524258 32524409 . + . Parent=GSCOCT00028445001 | |
| 19307 chr1 manual_curation exon 32524527 32524652 . + . Parent=GSCOCT00028445001 | |
| 19308 chr1 manual_curation exon 32526427 32527068 . + . Parent=GSCOCT00028445001 | |
| 19309 chr1 manual_curation CDS 32523979 32524130 . + 0 Parent=GSCOCT00028445001 | |
| 19310 chr1 manual_curation CDS 32524258 32524409 . + 2 Parent=GSCOCT00028445001 | |
| 19311 chr1 manual_curation CDS 32524527 32524652 . + 1 Parent=GSCOCT00028445001 | |
| 19312 chr1 manual_curation CDS 32526427 32526659 . + 1 Parent=GSCOCT00028445001 | |
| 19313 chr1 manual_curation gene 32530237 32533452 . + . ID=GSCOCG00028446001;Name=Cc01_g14470 | |
| 19314 chr1 manual_curation mRNA 32530237 32533452 . + . ID=GSCOCT00028446001;Parent=GSCOCG00028446001;Name=Cc01_g14470 | |
| 19315 chr1 manual_curation polypeptide 32531075 32533206 . + . ID=GSCOCP00028446001;Dbxref=InterPro:IPR001245,InterPro:IPR011009,PFAM:PF07714,SUPERFAMILY:SSF56112,SwissProt:Q9SJG2,TAIR:AT1G58280.2,TAIR:AT2G17280.1,TAIR:AT5G64460.2,TrEMBL:B9GJ08,TrEMBL:I1KQV4,TrEMBL:I1M2J7;Derives_from=GSCOCT00028446001;Name=Cc01_g14470;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0005524,GO:0006468,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:At2g42960;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028446001~ Hypothetical protein~ At2g42960~ missing_functional_completeness;original_location=join(2343536..2343615%2C2343818..2343886%2C2344016..2344145%2C2344654..2344729%2C2344858..2344942%2C2345526..2345667);owner=coffea | |
| 19316 chr1 manual_curation exon 32530237 32531154 . + . Parent=GSCOCT00028446001 | |
| 19317 chr1 manual_curation exon 32531357 32531425 . + . Parent=GSCOCT00028446001 | |
| 19318 chr1 manual_curation exon 32531555 32531684 . + . Parent=GSCOCT00028446001 | |
| 19319 chr1 manual_curation exon 32532193 32532268 . + . Parent=GSCOCT00028446001 | |
| 19320 chr1 manual_curation exon 32532397 32532481 . + . Parent=GSCOCT00028446001 | |
| 19321 chr1 manual_curation exon 32533065 32533452 . + . Parent=GSCOCT00028446001 | |
| 19322 chr1 manual_curation CDS 32531075 32531154 . + 0 Parent=GSCOCT00028446001 | |
| 19323 chr1 manual_curation CDS 32531357 32531425 . + 2 Parent=GSCOCT00028446001 | |
| 19324 chr1 manual_curation CDS 32531555 32531684 . + 2 Parent=GSCOCT00028446001 | |
| 19325 chr1 manual_curation CDS 32532193 32532268 . + 0 Parent=GSCOCT00028446001 | |
| 19326 chr1 manual_curation CDS 32532397 32532481 . + 1 Parent=GSCOCT00028446001 | |
| 19327 chr1 manual_curation CDS 32533065 32533206 . + 2 Parent=GSCOCT00028446001 | |
| 19328 chr1 manual_curation gene 32536059 32539890 . + . ID=GSCOCG00028447001;Name=Cc01_g14480 | |
| 19329 chr1 manual_curation mRNA 32536059 32539890 . + . ID=GSCOCT00028447001;Parent=GSCOCG00028447001;Name=Cc01_g14480 | |
| 19330 chr1 manual_curation polypeptide 32536059 32539667 . + . ID=GSCOCP00028447001;Dbxref=InterPro:IPR003855,InterPro:IPR018519,PFAM:PF02705,SwissProt:O22397,SwissProt:Q8H3P9,SwissProt:Q942X8,TAIR:AT1G70300.1,TAIR:AT2G30070.1,TAIR:AT5G14880.1,TIGRFAMs:TIGR00794,TrEMBL:D7LBJ4,TrEMBL:G7K729,TrEMBL:Q56YD6;Derives_from=GSCOCT00028447001;Name=Cc01_g14480;Ontology_term=CC_evidence_code:ISS,GO:0006813,GO:0015079,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Potassium transporter 1,CC_functional_completeness:complete,CC_gene:POT1,CC_gene:HAK2,CC_gene:HAK7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028447001~ Potassium transporter 1~ POT1~ complete;original_location=join(2348520..2348561%2C2348799..2349042%2C2349458..2349703%2C2349913..2349963%2C2350076..2350336%2C2350418..2350470%2C2350573..2350621%2C2350770..2351024%2C2351122..2351801%2C2351916..2352128);owner=coffea | |
| 19331 chr1 manual_curation exon 32536059 32536100 . + . Parent=GSCOCT00028447001 | |
| 19332 chr1 manual_curation exon 32536338 32536581 . + . Parent=GSCOCT00028447001 | |
| 19333 chr1 manual_curation exon 32536997 32537242 . + . Parent=GSCOCT00028447001 | |
| 19334 chr1 manual_curation exon 32537452 32537502 . + . Parent=GSCOCT00028447001 | |
| 19335 chr1 manual_curation exon 32537615 32537875 . + . Parent=GSCOCT00028447001 | |
| 19336 chr1 manual_curation exon 32537957 32538009 . + . Parent=GSCOCT00028447001 | |
| 19337 chr1 manual_curation exon 32538112 32538160 . + . Parent=GSCOCT00028447001 | |
| 19338 chr1 manual_curation exon 32538309 32538563 . + . Parent=GSCOCT00028447001 | |
| 19339 chr1 manual_curation exon 32538661 32539340 . + . Parent=GSCOCT00028447001 | |
| 19340 chr1 manual_curation exon 32539455 32539890 . + . Parent=GSCOCT00028447001 | |
| 19341 chr1 manual_curation CDS 32536059 32536100 . + 0 Parent=GSCOCT00028447001 | |
| 19342 chr1 manual_curation CDS 32536338 32536581 . + 0 Parent=GSCOCT00028447001 | |
| 19343 chr1 manual_curation CDS 32536997 32537242 . + 1 Parent=GSCOCT00028447001 | |
| 19344 chr1 manual_curation CDS 32537452 32537502 . + 1 Parent=GSCOCT00028447001 | |
| 19345 chr1 manual_curation CDS 32537615 32537875 . + 1 Parent=GSCOCT00028447001 | |
| 19346 chr1 manual_curation CDS 32537957 32538009 . + 1 Parent=GSCOCT00028447001 | |
| 19347 chr1 manual_curation CDS 32538112 32538160 . + 0 Parent=GSCOCT00028447001 | |
| 19348 chr1 manual_curation CDS 32538309 32538563 . + 1 Parent=GSCOCT00028447001 | |
| 19349 chr1 manual_curation CDS 32538661 32539340 . + 1 Parent=GSCOCT00028447001 | |
| 19350 chr1 manual_curation CDS 32539455 32539667 . + 0 Parent=GSCOCT00028447001 | |
| 19351 chr1 manual_curation gene 32540951 32543456 . + . ID=GSCOCG00028448001;Name=Cc01_g14490 | |
| 19352 chr1 manual_curation mRNA 32540951 32543456 . + . ID=GSCOCT00028448001;Parent=GSCOCG00028448001;Name=Cc01_g14490 | |
| 19353 chr1 manual_curation polypeptide 32542361 32543456 . + . ID=GSCOCP00028448001;Dbxref=SwissProt:Q9LI74,TAIR:AT1G07120.1,TAIR:AT3G25690.1,TAIR:AT4G18570.1,TrEMBL:F6GUP7,TrEMBL:I1JHF1,TrEMBL:I1LLN2;Derives_from=GSCOCT00028448001;Name=Cc01_g14490;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative FUNCTIONS IN,CC_functional_completeness:fragment,CC_gene:CHUP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028448001~ Putative FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast envelope%3B EXPRESSED IN: inflorescence meristem%2C petal%2C leaf whorl%2C flower%3B EXPRESSED DURING: 4 anthesis%2C petal differentiation and expansion stage%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G18570.1)%3B Has 288 Blast hits to 260 proteins in 50 species: Archae - 0%3B Bacteria - 8%3B Metazoa - 27%3B Fungi - 15%3B Plants - 163%3B Viruses - 0%3B Other Eukaryotes - 75 (source: NCBI BLink).~ CHUP1~ fragment;original_location=join(2354822..2355277%2C2355475..2355799%2C2355883..2355917);owner=coffea | |
| 19354 chr1 manual_curation exon 32540951 32542816 . + . Parent=GSCOCT00028448001 | |
| 19355 chr1 manual_curation exon 32543014 32543338 . + . Parent=GSCOCT00028448001 | |
| 19356 chr1 manual_curation exon 32543422 32543456 . + . Parent=GSCOCT00028448001 | |
| 19357 chr1 manual_curation CDS 32542361 32542816 . + 0 Parent=GSCOCT00028448001 | |
| 19358 chr1 manual_curation CDS 32543014 32543338 . + 0 Parent=GSCOCT00028448001 | |
| 19359 chr1 manual_curation CDS 32543422 32543456 . + 1 Parent=GSCOCT00028448001 | |
| 19360 chr1 manual_curation gene 32543507 32545563 . + . ID=GSCOCG00028449001;Name=Cc01_g14500 | |
| 19361 chr1 manual_curation mRNA 32543507 32545563 . + . ID=GSCOCT00028449001;Parent=GSCOCG00028449001;Name=Cc01_g14500 | |
| 19362 chr1 manual_curation polypeptide 32543507 32544250 . + . ID=GSCOCP00028449001;Dbxref=SwissProt:Q9LI74,TAIR:AT1G07120.1,TAIR:AT3G25690.1,TAIR:AT4G18570.1,TrEMBL:I1LLL9,TrEMBL:I1LLN2,TrEMBL:Q9LMK4;Derives_from=GSCOCT00028449001;Name=Cc01_g14500;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein CHUP1%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:CHUP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028449001~ Protein CHUP1%2C chloroplastic~ CHUP1~ fragment;original_location=join(2355968..2355994%2C2356342..2356473%2C2356631..2356711);owner=coffea | |
| 19363 chr1 manual_curation exon 32543507 32543533 . + . Parent=GSCOCT00028449001 | |
| 19364 chr1 manual_curation exon 32543881 32544012 . + . Parent=GSCOCT00028449001 | |
| 19365 chr1 manual_curation exon 32544170 32545563 . + . Parent=GSCOCT00028449001 | |
| 19366 chr1 manual_curation CDS 32543507 32543533 . + 0 Parent=GSCOCT00028449001 | |
| 19367 chr1 manual_curation CDS 32543881 32544012 . + 0 Parent=GSCOCT00028449001 | |
| 19368 chr1 manual_curation CDS 32544170 32544250 . + 0 Parent=GSCOCT00028449001 | |
| 19369 chr1 manual_curation gene 32549269 32559868 . + . ID=GSCOCG00028451001;Name=Cc01_g14510 | |
| 19370 chr1 manual_curation mRNA 32549269 32559868 . + . ID=GSCOCT00028451001;Parent=GSCOCG00028451001;Name=Cc01_g14510 | |
| 19371 chr1 manual_curation polypeptide 32549402 32559683 . + . ID=GSCOCP00028451001;Dbxref=GENE3D:G3DSA:2.60.40.10,InterPro:IPR001345,InterPro:IPR002044,InterPro:IPR003094,InterPro:IPR013078,InterPro:IPR013079,InterPro:IPR013783,InterPro:IPR013784,InterPro:IPR016260,PANTHER:PTHR10606,PFAM:PF00300,PFAM:PF00686,PFAM:PF01591,PIR:PIRSF000709,PRINTS:PR00991,PROFILE:PS51166,PROSITE:PS00175,SMART:SM00855,SUPERFAMILY:SSF49452,SwissProt:O35552,SwissProt:P16118,SwissProt:Q9MB58,TAIR:AT1G07110.1,TAIR:AT3G30200.1,TrEMBL:A9PEZ0,TrEMBL:D7SJU7,TrEMBL:Q93XR7;Derives_from=GSCOCT00028451001;Name=Cc01_g14510;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0003873,GO:0005524,GO:0005975,GO:0006000,GO:0008152,GO:0030246,CC_EC_number:3.1.3.46,PRODUCT:6-phosphofructo-2-kinase/fructose-2%2C6-bisphosphatase,CC_functional_completeness:complete,CC_gene:FKFBP,CC_gene:PFKFB1,CC_gene:Pfkfb3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028451001~ 6-phosphofructo-2-kinase/fructose-2%2C6-bisphosphatase~ FKFBP~ complete;original_location=join(2361863..2362054%2C2362193..2362256%2C2362350..2362648%2C2363715..2363924%2C2364331..2364540%2C2364655..2364750%2C2364987..2365085%2C2365168..2365197%2C2366930..2366983%2C2367583..2367636%2C2367707..2367784%2C2368087..2368178%2C2368254..2368311%2C2368395..2368469%2C2369400..2369447%2C2369604..2369701%2C2370578..2370653%2C2370939..2371001%2C2371144..2371235%2C2371533..2371601%2C2371694..2371757%2C2371850..2371915%2C2372070..2372144);owner=coffea | |
| 19372 chr1 manual_curation exon 32549269 32549593 . + . Parent=GSCOCT00028451001 | |
| 19373 chr1 manual_curation exon 32549732 32549795 . + . Parent=GSCOCT00028451001 | |
| 19374 chr1 manual_curation exon 32549889 32550187 . + . Parent=GSCOCT00028451001 | |
| 19375 chr1 manual_curation exon 32551254 32551463 . + . Parent=GSCOCT00028451001 | |
| 19376 chr1 manual_curation exon 32551870 32552079 . + . Parent=GSCOCT00028451001 | |
| 19377 chr1 manual_curation exon 32552194 32552289 . + . Parent=GSCOCT00028451001 | |
| 19378 chr1 manual_curation exon 32552526 32552624 . + . Parent=GSCOCT00028451001 | |
| 19379 chr1 manual_curation exon 32552707 32552736 . + . Parent=GSCOCT00028451001 | |
| 19380 chr1 manual_curation exon 32554469 32554522 . + . Parent=GSCOCT00028451001 | |
| 19381 chr1 manual_curation exon 32555122 32555175 . + . Parent=GSCOCT00028451001 | |
| 19382 chr1 manual_curation exon 32555246 32555323 . + . Parent=GSCOCT00028451001 | |
| 19383 chr1 manual_curation exon 32555626 32555717 . + . Parent=GSCOCT00028451001 | |
| 19384 chr1 manual_curation exon 32555793 32555850 . + . Parent=GSCOCT00028451001 | |
| 19385 chr1 manual_curation exon 32555934 32556008 . + . Parent=GSCOCT00028451001 | |
| 19386 chr1 manual_curation exon 32556939 32556986 . + . Parent=GSCOCT00028451001 | |
| 19387 chr1 manual_curation exon 32557143 32557240 . + . Parent=GSCOCT00028451001 | |
| 19388 chr1 manual_curation exon 32558117 32558192 . + . Parent=GSCOCT00028451001 | |
| 19389 chr1 manual_curation exon 32558478 32558540 . + . Parent=GSCOCT00028451001 | |
| 19390 chr1 manual_curation exon 32558683 32558774 . + . Parent=GSCOCT00028451001 | |
| 19391 chr1 manual_curation exon 32559072 32559140 . + . Parent=GSCOCT00028451001 | |
| 19392 chr1 manual_curation exon 32559233 32559296 . + . Parent=GSCOCT00028451001 | |
| 19393 chr1 manual_curation exon 32559389 32559454 . + . Parent=GSCOCT00028451001 | |
| 19394 chr1 manual_curation exon 32559609 32559868 . + . Parent=GSCOCT00028451001 | |
| 19395 chr1 manual_curation CDS 32549402 32549593 . + 0 Parent=GSCOCT00028451001 | |
| 19396 chr1 manual_curation CDS 32549732 32549795 . + 0 Parent=GSCOCT00028451001 | |
| 19397 chr1 manual_curation CDS 32549889 32550187 . + 1 Parent=GSCOCT00028451001 | |
| 19398 chr1 manual_curation CDS 32551254 32551463 . + 0 Parent=GSCOCT00028451001 | |
| 19399 chr1 manual_curation CDS 32551870 32552079 . + 0 Parent=GSCOCT00028451001 | |
| 19400 chr1 manual_curation CDS 32552194 32552289 . + 0 Parent=GSCOCT00028451001 | |
| 19401 chr1 manual_curation CDS 32552526 32552624 . + 0 Parent=GSCOCT00028451001 | |
| 19402 chr1 manual_curation CDS 32552707 32552736 . + 0 Parent=GSCOCT00028451001 | |
| 19403 chr1 manual_curation CDS 32554469 32554522 . + 0 Parent=GSCOCT00028451001 | |
| 19404 chr1 manual_curation CDS 32555122 32555175 . + 0 Parent=GSCOCT00028451001 | |
| 19405 chr1 manual_curation CDS 32555246 32555323 . + 0 Parent=GSCOCT00028451001 | |
| 19406 chr1 manual_curation CDS 32555626 32555717 . + 0 Parent=GSCOCT00028451001 | |
| 19407 chr1 manual_curation CDS 32555793 32555850 . + 2 Parent=GSCOCT00028451001 | |
| 19408 chr1 manual_curation CDS 32555934 32556008 . + 0 Parent=GSCOCT00028451001 | |
| 19409 chr1 manual_curation CDS 32556939 32556986 . + 0 Parent=GSCOCT00028451001 | |
| 19410 chr1 manual_curation CDS 32557143 32557240 . + 0 Parent=GSCOCT00028451001 | |
| 19411 chr1 manual_curation CDS 32558117 32558192 . + 2 Parent=GSCOCT00028451001 | |
| 19412 chr1 manual_curation CDS 32558478 32558540 . + 0 Parent=GSCOCT00028451001 | |
| 19413 chr1 manual_curation CDS 32558683 32558774 . + 0 Parent=GSCOCT00028451001 | |
| 19414 chr1 manual_curation CDS 32559072 32559140 . + 2 Parent=GSCOCT00028451001 | |
| 19415 chr1 manual_curation CDS 32559233 32559296 . + 2 Parent=GSCOCT00028451001 | |
| 19416 chr1 manual_curation CDS 32559389 32559454 . + 0 Parent=GSCOCT00028451001 | |
| 19417 chr1 manual_curation CDS 32559609 32559683 . + 0 Parent=GSCOCT00028451001 | |
| 19418 chr1 manual_curation gene 32561486 32562370 . + . ID=GSCOCG00028452001;Name=Cc01_g14520 | |
| 19419 chr1 manual_curation mRNA 32561486 32562370 . + . ID=GSCOCT00028452001;Parent=GSCOCG00028452001;Name=Cc01_g14520 | |
| 19420 chr1 manual_curation polypeptide 32561486 32562370 . + . ID=GSCOCP00028452001;Dbxref=InterPro:IPR001841,InterPro:IPR018957,PFAM:PF00097,PROFILE:PS50089,SMART:SM00184,SwissProt:Q8L9T5,SwissProt:Q9SLC3,SwissProt:Q9XF63,TAIR:AT1G72310.1,TAIR:AT2G42360.1,TAIR:AT3G16720.1,TrEMBL:B9S6J7,TrEMBL:D7SJU6,TrEMBL:I1LLL7;Derives_from=GSCOCT00028452001;Name=Cc01_g14520;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:ATL2,CC_gene:ATL3,CC_gene:ATL41;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028452001~ Putative uncharacterized protein~ ATL2~ complete;original_location=2373947..2374831;owner=coffea | |
| 19421 chr1 manual_curation exon 32561486 32562370 . + . Parent=GSCOCT00028452001 | |
| 19422 chr1 manual_curation CDS 32561486 32562370 . + 0 Parent=GSCOCT00028452001 | |
| 19423 chr1 manual_curation gene 32570964 32574006 . - . ID=GSCOCG00028455001;Name=Cc01_g14530 | |
| 19424 chr1 manual_curation mRNA 32570964 32574006 . - . ID=GSCOCT00028455001;Parent=GSCOCG00028455001;Name=Cc01_g14530 | |
| 19425 chr1 manual_curation polypeptide 32571156 32573617 . - . ID=GSCOCP00028455001;Dbxref=InterPro:IPR003689,InterPro:IPR004698,PFAM:PF02535,SwissProt:O64738,SwissProt:Q6L8F9,SwissProt:Q8W246,TAIR:AT1G31260.1,TAIR:AT2G04032.1,TAIR:AT2G30080.1,TIGRFAMs:TIGR00820,TrEMBL:B9HND0,TrEMBL:D7SJU5,TrEMBL:E5L4Q5;Derives_from=GSCOCT00028455001;Name=Cc01_g14530;Ontology_term=CC_evidence_code:ISS,GO:0005385,GO:0006829,GO:0016020,GO:0016021,GO:0030001,GO:0046873,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Zinc transporter 6%2C chloroplastic,CC_functional_completeness:complete,CC_gene:ZIP6,CC_gene:ZIP7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028455001~ Zinc transporter 6%2C chloroplastic~ ZIP6~ complete;original_location=complement(join(2385356..2386078%2C2383617..2383931));owner=coffea | |
| 19426 chr1 manual_curation exon 32570964 32571470 . - . Parent=GSCOCT00028455001 | |
| 19427 chr1 manual_curation exon 32572895 32574006 . - . Parent=GSCOCT00028455001 | |
| 19428 chr1 manual_curation CDS 32571156 32571470 . - 0 Parent=GSCOCT00028455001 | |
| 19429 chr1 manual_curation CDS 32572895 32573617 . - 0 Parent=GSCOCT00028455001 | |
| 19430 chr1 manual_curation gene 32578338 32580291 . - . ID=GSCOCG00028456001;Name=Cc01_g14540 | |
| 19431 chr1 manual_curation mRNA 32578338 32580291 . - . ID=GSCOCT00028456001;Parent=GSCOCG00028456001;Name=Cc01_g14540 | |
| 19432 chr1 manual_curation polypeptide 32578774 32580161 . - . ID=GSCOCP00028456001;Dbxref=GENE3D:G3DSA:3.40.630.30,InterPro:IPR000182,InterPro:IPR016181,InterPro:IPR022610,PFAM:PF00583,PROFILE:PS51186,SUPERFAMILY:SSF55729,TAIR:AT2G23060.1,TAIR:AT2G30090.1,TAIR:AT4G37580.1,TrEMBL:C6T9A1,TrEMBL:I1LLN9,TrEMBL:I1MZX3;Derives_from=GSCOCT00028456001;Name=Cc01_g14540;Ontology_term=CC_evidence_code:ISS,GO:0008080,GO:0008152,CC_EC_number:missing_EC_number,PRODUCT:Acyl-CoA N-acyltransferases (NAT) superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028456001~ Acyl-CoA N-acyltransferases (NAT) superfamily protein~ unknown_gene~ complete;original_location=complement(join(2392446..2392622%2C2391235..2392251));owner=coffea | |
| 19433 chr1 manual_curation exon 32578338 32579790 . - . Parent=GSCOCT00028456001 | |
| 19434 chr1 manual_curation exon 32579985 32580291 . - . Parent=GSCOCT00028456001 | |
| 19435 chr1 manual_curation CDS 32578774 32579790 . - 0 Parent=GSCOCT00028456001 | |
| 19436 chr1 manual_curation CDS 32579985 32580161 . - 0 Parent=GSCOCT00028456001 | |
| 19437 chr1 manual_curation gene 32588396 32590684 . + . ID=GSCOCG00028457001;Name=Cc01_g14550 | |
| 19438 chr1 manual_curation mRNA 32588396 32590684 . + . ID=GSCOCT00028457001;Parent=GSCOCG00028457001;Name=Cc01_g14550 | |
| 19439 chr1 manual_curation polypeptide 32588659 32590158 . + . ID=GSCOCP00028457001;Dbxref=InterPro:IPR000626,InterPro:IPR003103,InterPro:IPR019955,PFAM:PF00240,PFAM:PF02179,PROFILE:PS50053,PROFILE:PS51035,SMART:SM00213,SMART:SM00264,SwissProt:Q0WPX7,SwissProt:Q0WUQ1,SwissProt:Q8RX71,TAIR:AT3G51780.1,TAIR:AT5G07220.1,TAIR:AT5G52060.1,TrEMBL:B9GGQ6,TrEMBL:B9HNC8,TrEMBL:D7SJU3;Derives_from=GSCOCT00028457001;Name=Cc01_g14550;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0006915,CC_EC_number:missing_EC_number,PRODUCT:Putative BAG family molecular chaperone regulator 4,CC_functional_completeness:complete,CC_gene:BAG4,CC_gene:BAG1,CC_gene:BAG2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028457001~ Putative BAG family molecular chaperone regulator 4~ BAG4~ complete;original_location=join(2401120..2401189%2C2401639..2401895%2C2401972..2402118%2C2402422..2402619);owner=coffea | |
| 19440 chr1 manual_curation exon 32588396 32588728 . + . Parent=GSCOCT00028457001 | |
| 19441 chr1 manual_curation exon 32589178 32589434 . + . Parent=GSCOCT00028457001 | |
| 19442 chr1 manual_curation exon 32589511 32589657 . + . Parent=GSCOCT00028457001 | |
| 19443 chr1 manual_curation exon 32589961 32590684 . + . Parent=GSCOCT00028457001 | |
| 19444 chr1 manual_curation CDS 32588659 32588728 . + 0 Parent=GSCOCT00028457001 | |
| 19445 chr1 manual_curation CDS 32589178 32589434 . + 1 Parent=GSCOCT00028457001 | |
| 19446 chr1 manual_curation CDS 32589511 32589657 . + 0 Parent=GSCOCT00028457001 | |
| 19447 chr1 manual_curation CDS 32589961 32590158 . + 0 Parent=GSCOCT00028457001 | |
| 19448 chr1 manual_curation gene 32597920 32600056 . - . ID=GSCOCG00028460001;Name=Cc01_g14560 | |
| 19449 chr1 manual_curation mRNA 32597920 32600056 . - . ID=GSCOCT00028460001;Parent=GSCOCG00028460001;Name=Cc01_g14560 | |
| 19450 chr1 manual_curation polypeptide 32598290 32599466 . - . ID=GSCOCP00028460001;Dbxref=InterPro:IPR013246,PFAM:PF08209,TAIR:AT5G58575.1,TrEMBL:B9GGQ7,TrEMBL:B9RSC7,TrEMBL:F6GUM6;Derives_from=GSCOCT00028460001;Name=Cc01_g14560;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:CONTAINS InterPro DOMAIN/s,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028460001~ CONTAINS InterPro DOMAIN/s: Sgf11%2C transcriptional regulation (InterPro:IPR013246)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(2411886..2411927%2C2411132..2411443%2C2410751..2410933));owner=coffea | |
| 19451 chr1 manual_curation exon 32599752 32599808 . - . Parent=GSCOCT00028460001 | |
| 19452 chr1 manual_curation exon 32599961 32600056 . - . Parent=GSCOCT00028460001 | |
| 19453 chr1 manual_curation exon 32597920 32598472 . - . Parent=GSCOCT00028460001 | |
| 19454 chr1 manual_curation exon 32598671 32598982 . - . Parent=GSCOCT00028460001 | |
| 19455 chr1 manual_curation exon 32599425 32599502 . - . Parent=GSCOCT00028460001 | |
| 19456 chr1 manual_curation CDS 32598290 32598472 . - 0 Parent=GSCOCT00028460001 | |
| 19457 chr1 manual_curation CDS 32598671 32598982 . - 0 Parent=GSCOCT00028460001 | |
| 19458 chr1 manual_curation CDS 32599425 32599466 . - 0 Parent=GSCOCT00028460001 | |
| 19459 chr1 manual_curation gene 32608691 32611572 . - . ID=GSCOCG00028463001;Name=Cc01_g14570 | |
| 19460 chr1 manual_curation mRNA 32608691 32611572 . - . ID=GSCOCT00028463001;Parent=GSCOCG00028463001;Name=Cc01_g14570 | |
| 19461 chr1 manual_curation polypeptide 32608691 32611139 . - . ID=GSCOCP00028463001;Dbxref=InterPro:IPR000374,PFAM:PF01148,SwissProt:Q2N2K0,SwissProt:Q5N9J9,SwissProt:Q67ZM7,TAIR:AT5G04490.1,TAIR:AT5G58560.1,TrEMBL:B9HNC3,TrEMBL:B9RSC8,TrEMBL:F1BPW2;Derives_from=GSCOCT00028463001;Name=Cc01_g14570;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Probable phytol kinase 2%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:Os01g0832000,CC_gene:At5g58560;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028463001~ Probable phytol kinase 2%2C chloroplastic~ Os01g0832000~ fragment;original_location=complement(join(2423484..2423600%2C2422285..2422352%2C2422067..2422198%2C2421751..2421866%2C2421408..2421522%2C2421152..2421329));owner=coffea | |
| 19462 chr1 manual_curation exon 32608691 32608868 . - . Parent=GSCOCT00028463001 | |
| 19463 chr1 manual_curation exon 32608947 32609061 . - . Parent=GSCOCT00028463001 | |
| 19464 chr1 manual_curation exon 32609290 32609405 . - . Parent=GSCOCT00028463001 | |
| 19465 chr1 manual_curation exon 32609606 32609737 . - . Parent=GSCOCT00028463001 | |
| 19466 chr1 manual_curation exon 32609824 32609891 . - . Parent=GSCOCT00028463001 | |
| 19467 chr1 manual_curation exon 32611023 32611572 . - . Parent=GSCOCT00028463001 | |
| 19468 chr1 manual_curation CDS 32608691 32608868 . - 2 Parent=GSCOCT00028463001 | |
| 19469 chr1 manual_curation CDS 32608947 32609061 . - 1 Parent=GSCOCT00028463001 | |
| 19470 chr1 manual_curation CDS 32609290 32609405 . - 2 Parent=GSCOCT00028463001 | |
| 19471 chr1 manual_curation CDS 32609606 32609737 . - 2 Parent=GSCOCT00028463001 | |
| 19472 chr1 manual_curation CDS 32609824 32609891 . - 0 Parent=GSCOCT00028463001 | |
| 19473 chr1 manual_curation CDS 32611023 32611139 . - 0 Parent=GSCOCT00028463001 | |
| 19474 chr1 manual_curation gene 32614410 32615881 . + . ID=GSCOCG00028464001;Name=Cc01_g14580 | |
| 19475 chr1 manual_curation mRNA 32614410 32615881 . + . ID=GSCOCT00028464001;Parent=GSCOCG00028464001;Name=Cc01_g14580 | |
| 19476 chr1 manual_curation polypeptide 32614410 32615881 . + . ID=GSCOCP00028464001;Dbxref=InterPro:IPR004827,InterPro:IPR011616,PFAM:PF00170,PROFILE:PS50217,PROSITE:PS00036,SMART:SM00338;Derives_from=GSCOCT00028464001;Name=Cc01_g14580;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0043565,GO:0046983,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028464001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(2426871..2427301%2C2427438..2427528%2C2427806..2427932%2C2428032..2428112%2C2428272..2428342);owner=coffea | |
| 19477 chr1 manual_curation exon 32614410 32614840 . + . Parent=GSCOCT00028464001 | |
| 19478 chr1 manual_curation exon 32614977 32615067 . + . Parent=GSCOCT00028464001 | |
| 19479 chr1 manual_curation exon 32615345 32615471 . + . Parent=GSCOCT00028464001 | |
| 19480 chr1 manual_curation exon 32615571 32615651 . + . Parent=GSCOCT00028464001 | |
| 19481 chr1 manual_curation exon 32615811 32615881 . + . Parent=GSCOCT00028464001 | |
| 19482 chr1 manual_curation CDS 32614410 32614840 . + 0 Parent=GSCOCT00028464001 | |
| 19483 chr1 manual_curation CDS 32614977 32615067 . + 2 Parent=GSCOCT00028464001 | |
| 19484 chr1 manual_curation CDS 32615345 32615471 . + 0 Parent=GSCOCT00028464001 | |
| 19485 chr1 manual_curation CDS 32615571 32615651 . + 1 Parent=GSCOCT00028464001 | |
| 19486 chr1 manual_curation CDS 32615811 32615881 . + 1 Parent=GSCOCT00028464001 | |
| 19487 chr1 manual_curation gene 32617635 32619298 . - . ID=GSCOCG00028465001;Name=Cc01_g14590 | |
| 19488 chr1 manual_curation mRNA 32617635 32619298 . - . ID=GSCOCT00028465001;Parent=GSCOCG00028465001;Name=Cc01_g14590 | |
| 19489 chr1 manual_curation polypeptide 32617635 32619298 . - . ID=GSCOCP00028465001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR006447,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR014778,InterPro:IPR017930,PFAM:PF00249,PROFILE:PS51294,SUPERFAMILY:SSF46689,SwissProt:Q700D9,SwissProt:Q9C616,SwissProt:Q9FJV5,TAIR:AT2G02060.1,TAIR:AT2G38300.1,TAIR:AT2G40260.1,TIGRFAMs:TIGR01557,TrEMBL:A5AMV6,TrEMBL:B9GGQ9,TrEMBL:D7SJT9;Derives_from=GSCOCT00028465001;Name=Cc01_g14590;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative Predicted protein,CC_functional_completeness:complete,CC_gene:At1g14600,CC_gene:KAN4,CC_gene:KAN2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028465001~ Putative Predicted protein~ At1g14600~ complete;original_location=complement(join(2431492..2431759%2C2431309..2431385%2C2431075..2431111%2C2430824..2430923%2C2430096..2430732));owner=coffea | |
| 19490 chr1 manual_curation exon 32617635 32618271 . - . Parent=GSCOCT00028465001 | |
| 19491 chr1 manual_curation exon 32618363 32618462 . - . Parent=GSCOCT00028465001 | |
| 19492 chr1 manual_curation exon 32618614 32618650 . - . Parent=GSCOCT00028465001 | |
| 19493 chr1 manual_curation exon 32618848 32618924 . - . Parent=GSCOCT00028465001 | |
| 19494 chr1 manual_curation exon 32619031 32619298 . - . Parent=GSCOCT00028465001 | |
| 19495 chr1 manual_curation CDS 32617635 32618271 . - 2 Parent=GSCOCT00028465001 | |
| 19496 chr1 manual_curation CDS 32618363 32618462 . - 1 Parent=GSCOCT00028465001 | |
| 19497 chr1 manual_curation CDS 32618614 32618650 . - 0 Parent=GSCOCT00028465001 | |
| 19498 chr1 manual_curation CDS 32618848 32618924 . - 1 Parent=GSCOCT00028465001 | |
| 19499 chr1 manual_curation CDS 32619031 32619298 . - 0 Parent=GSCOCT00028465001 | |
| 19500 chr1 manual_curation gene 32630434 32634422 . + . ID=GSCOCG00028466001;Name=Cc01_g14600 | |
| 19501 chr1 manual_curation mRNA 32630434 32634422 . + . ID=GSCOCT00028466001;Parent=GSCOCG00028466001;Name=Cc01_g14600 | |
| 19502 chr1 manual_curation polypeptide 32631146 32633939 . + . ID=GSCOCP00028466001;Dbxref=InterPro:IPR002885,PROFILE:PS51375,SwissProt:Q0WNN7,TAIR:AT2G30100.1,TrEMBL:B9HNB9,TrEMBL:B9S5C4,TrEMBL:F6GUM4;Derives_from=GSCOCT00028466001;Name=Cc01_g14600;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At2g30100%2C chloroplastic,CC_functional_completeness:complete,CC_gene:At2g30100;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028466001~ Pentatricopeptide repeat-containing protein At2g30100%2C chloroplastic~ At2g30100~ complete;original_location=join(2443607..2443693%2C2443781..2444023%2C2445627..2446400);owner=coffea | |
| 19503 chr1 manual_curation exon 32630434 32631232 . + . Parent=GSCOCT00028466001 | |
| 19504 chr1 manual_curation exon 32631320 32631562 . + . Parent=GSCOCT00028466001 | |
| 19505 chr1 manual_curation exon 32633166 32634422 . + . Parent=GSCOCT00028466001 | |
| 19506 chr1 manual_curation CDS 32631146 32631232 . + 0 Parent=GSCOCT00028466001 | |
| 19507 chr1 manual_curation CDS 32631320 32631562 . + 0 Parent=GSCOCT00028466001 | |
| 19508 chr1 manual_curation CDS 32633166 32633939 . + 0 Parent=GSCOCT00028466001 | |
| 19509 chr1 manual_curation gene 32637913 32644592 . + . ID=GSCOCG00028467001;Name=Cc01_g14610 | |
| 19510 chr1 manual_curation mRNA 32637913 32644592 . + . ID=GSCOCT00028467001;Parent=GSCOCG00028467001;Name=Cc01_g14610 | |
| 19511 chr1 manual_curation polypeptide 32638331 32644058 . + . ID=GSCOCP00028467001;Dbxref=GENE3D:G3DSA:1.25.40.10,InterPro:IPR001440,InterPro:IPR011333,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR019734,PFAM:PF00515,PROFILE:PS50005,PROFILE:PS50293,SMART:SM00028,SUPERFAMILY:SSF54695,SwissProt:O65020,SwissProt:Q9LV01,SwissProt:Q9ZQX6,TAIR:AT3G51770.2,TAIR:AT4G02680.1,TAIR:AT5G58550.1,TrEMBL:B9HNB8,TrEMBL:B9S5C3,TrEMBL:F6GUM3;Derives_from=GSCOCT00028467001;Name=Cc01_g14610;Ontology_term=CC_evidence_code:ISS,GO:0005488,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Ethylene-overproduction protein 1,CC_functional_completeness:complete,CC_gene:ETO1,CC_gene:EOL2,CC_gene:EOL1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028467001~ Ethylene-overproduction protein 1~ ETO1~ complete;original_location=join(2450792..2450918%2C2450979..2452767%2C2453497..2453788%2C2453873..2454182%2C2456287..2456519);owner=coffea | |
| 19512 chr1 manual_curation exon 32637913 32638457 . + . Parent=GSCOCT00028467001 | |
| 19513 chr1 manual_curation exon 32638518 32640306 . + . Parent=GSCOCT00028467001 | |
| 19514 chr1 manual_curation exon 32641036 32641327 . + . Parent=GSCOCT00028467001 | |
| 19515 chr1 manual_curation exon 32641412 32641721 . + . Parent=GSCOCT00028467001 | |
| 19516 chr1 manual_curation exon 32643826 32644592 . + . Parent=GSCOCT00028467001 | |
| 19517 chr1 manual_curation CDS 32638331 32638457 . + 0 Parent=GSCOCT00028467001 | |
| 19518 chr1 manual_curation CDS 32638518 32640306 . + 1 Parent=GSCOCT00028467001 | |
| 19519 chr1 manual_curation CDS 32641036 32641327 . + 2 Parent=GSCOCT00028467001 | |
| 19520 chr1 manual_curation CDS 32641412 32641721 . + 0 Parent=GSCOCT00028467001 | |
| 19521 chr1 manual_curation CDS 32643826 32644058 . + 1 Parent=GSCOCT00028467001 | |
| 19522 chr1 manual_curation gene 32644852 32650332 . - . ID=GSCOCG00028468001;Name=Cc01_g14620 | |
| 19523 chr1 manual_curation mRNA 32644852 32650332 . - . ID=GSCOCT00028468001;Parent=GSCOCG00028468001;Name=Cc01_g14620 | |
| 19524 chr1 manual_curation polypeptide 32645122 32649945 . - . ID=GSCOCP00028468001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR020635,PFAM:PF00560,PFAM:PF07714,PFAM:PF08263,PROFILE:PS50011,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:C0LGQ4,SwissProt:C0LGU7,SwissProt:Q9SIZ4,TAIR:AT2G40270.1,TAIR:AT4G18640.1,TAIR:AT5G45840.2,TrEMBL:G7JBX2,TrEMBL:I1M7R5,TrEMBL:I1MZ04;Derives_from=GSCOCT00028468001;Name=Cc01_g14620;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase MRH1,CC_functional_completeness:complete,CC_gene:MRH1,CC_gene:At5g45840,CC_gene:At2g40270;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028468001~ Putative Probable LRR receptor-like serine/threonine-protein kinase MRH1~ MRH1~ complete;original_location=complement(join(2462292..2462406%2C2462083..2462221%2C2461023..2461094%2C2460784..2460927%2C2460566..2460703%2C2459276..2459817%2C2458610..2458804%2C2458401..2458529%2C2457583..2458184));owner=coffea | |
| 19525 chr1 manual_curation exon 32644852 32645723 . - . Parent=GSCOCT00028468001 | |
| 19526 chr1 manual_curation exon 32645940 32646068 . - . Parent=GSCOCT00028468001 | |
| 19527 chr1 manual_curation exon 32646149 32646343 . - . Parent=GSCOCT00028468001 | |
| 19528 chr1 manual_curation exon 32646815 32647356 . - . Parent=GSCOCT00028468001 | |
| 19529 chr1 manual_curation exon 32648105 32648242 . - . Parent=GSCOCT00028468001 | |
| 19530 chr1 manual_curation exon 32648323 32648466 . - . Parent=GSCOCT00028468001 | |
| 19531 chr1 manual_curation exon 32648562 32648633 . - . Parent=GSCOCT00028468001 | |
| 19532 chr1 manual_curation exon 32649622 32649760 . - . Parent=GSCOCT00028468001 | |
| 19533 chr1 manual_curation exon 32649831 32650332 . - . Parent=GSCOCT00028468001 | |
| 19534 chr1 manual_curation CDS 32645122 32645723 . - 1 Parent=GSCOCT00028468001 | |
| 19535 chr1 manual_curation CDS 32645940 32646068 . - 1 Parent=GSCOCT00028468001 | |
| 19536 chr1 manual_curation CDS 32646149 32646343 . - 1 Parent=GSCOCT00028468001 | |
| 19537 chr1 manual_curation CDS 32646815 32647356 . - 2 Parent=GSCOCT00028468001 | |
| 19538 chr1 manual_curation CDS 32648105 32648242 . - 2 Parent=GSCOCT00028468001 | |
| 19539 chr1 manual_curation CDS 32648323 32648466 . - 2 Parent=GSCOCT00028468001 | |
| 19540 chr1 manual_curation CDS 32648562 32648633 . - 2 Parent=GSCOCT00028468001 | |
| 19541 chr1 manual_curation CDS 32649622 32649760 . - 1 Parent=GSCOCT00028468001 | |
| 19542 chr1 manual_curation CDS 32649831 32649945 . - 0 Parent=GSCOCT00028468001 | |
| 19543 chr1 manual_curation gene 32659479 32660264 . - . ID=GSCOCG00028470001;Name=Cc01_g14630 | |
| 19544 chr1 manual_curation mRNA 32659479 32660264 . - . ID=GSCOCT00028470001;Parent=GSCOCG00028470001;Name=Cc01_g14630 | |
| 19545 chr1 manual_curation polypeptide 32659479 32660264 . - . ID=GSCOCP00028470001;Dbxref=GENE3D:G3DSA:3.40.30.10,InterPro:IPR002109,InterPro:IPR012335,InterPro:IPR012336,PFAM:PF00462,PROFILE:PS51354,SUPERFAMILY:SSF52833,SwissProt:A8MXD5,SwissProt:Q9FLE8,SwissProt:Q9LH89,TAIR:AT3G57070.1,TAIR:AT5G13810.1,TAIR:AT5G58530.1,TrEMBL:B9GGR3,TrEMBL:D7SJT4,TrEMBL:I1LLQ6;Derives_from=GSCOCT00028470001;Name=Cc01_g14630;Ontology_term=CC_evidence_code:ISS,GO:0009055,GO:0015035,GO:0045454,CC_EC_number:missing_EC_number,PRODUCT:Glutaredoxin family protein,CC_functional_completeness:complete,CC_gene:At5g39865,CC_gene:At3g28850,CC_gene:GRXCR1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028470001~ Glutaredoxin family protein~ At5g39865~ complete;original_location=complement(2471940..2472725);owner=coffea | |
| 19546 chr1 manual_curation exon 32659479 32660264 . - . Parent=GSCOCT00028470001 | |
| 19547 chr1 manual_curation CDS 32659479 32660264 . - 0 Parent=GSCOCT00028470001 | |
| 19548 chr1 manual_curation gene 32666978 32671160 . + . ID=GSCOCG00028471001;Name=Cc01_g14640 | |
| 19549 chr1 manual_curation mRNA 32666978 32671160 . + . ID=GSCOCT00028471001;Parent=GSCOCG00028471001;Name=Cc01_g14640 | |
| 19550 chr1 manual_curation polypeptide 32667048 32670845 . + . ID=GSCOCP00028471001;Dbxref=InterPro:IPR000626,InterPro:IPR001611,InterPro:IPR003591,InterPro:IPR019955,PFAM:PF00240,PFAM:PF00560,PROFILE:PS50053,SMART:SM00213,SMART:SM00369,SwissProt:A4IIK1,SwissProt:P0C895,SwissProt:Q9BTT6,TAIR:AT2G30105.1,TAIR:AT4G26050.1,TAIR:AT5G07910.1,TrEMBL:A5B0K2,TrEMBL:B9GGR4,TrEMBL:D7SJT3;Derives_from=GSCOCT00028471001;Name=Cc01_g14640;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:3.1.3.16,PRODUCT:LRR repeats and ubiquitin-like domain-containing protein At2g30105,CC_functional_completeness:complete,CC_gene:At2g30105,CC_gene:mfhas1,CC_gene:LRRC1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028471001~ LRR repeats and ubiquitin-like domain-containing protein At2g30105~ At2g30105~ complete;original_location=join(2479509..2479695%2C2479811..2479905%2C2480017..2480175%2C2480742..2480852%2C2480954..2481054%2C2481885..2482022%2C2482328..2482376%2C2482625..2482690%2C2482975..2483094%2C2483193..2483306);owner=coffea | |
| 19551 chr1 manual_curation exon 32666978 32667234 . + . Parent=GSCOCT00028471001 | |
| 19552 chr1 manual_curation exon 32667350 32667444 . + . Parent=GSCOCT00028471001 | |
| 19553 chr1 manual_curation exon 32667556 32667714 . + . Parent=GSCOCT00028471001 | |
| 19554 chr1 manual_curation exon 32668281 32668391 . + . Parent=GSCOCT00028471001 | |
| 19555 chr1 manual_curation exon 32668493 32668593 . + . Parent=GSCOCT00028471001 | |
| 19556 chr1 manual_curation exon 32669424 32669561 . + . Parent=GSCOCT00028471001 | |
| 19557 chr1 manual_curation exon 32669867 32669915 . + . Parent=GSCOCT00028471001 | |
| 19558 chr1 manual_curation exon 32670164 32670229 . + . Parent=GSCOCT00028471001 | |
| 19559 chr1 manual_curation exon 32670514 32670633 . + . Parent=GSCOCT00028471001 | |
| 19560 chr1 manual_curation exon 32670732 32671160 . + . Parent=GSCOCT00028471001 | |
| 19561 chr1 manual_curation CDS 32667048 32667234 . + 0 Parent=GSCOCT00028471001 | |
| 19562 chr1 manual_curation CDS 32667350 32667444 . + 1 Parent=GSCOCT00028471001 | |
| 19563 chr1 manual_curation CDS 32667556 32667714 . + 0 Parent=GSCOCT00028471001 | |
| 19564 chr1 manual_curation CDS 32668281 32668391 . + 0 Parent=GSCOCT00028471001 | |
| 19565 chr1 manual_curation CDS 32668493 32668593 . + 0 Parent=GSCOCT00028471001 | |
| 19566 chr1 manual_curation CDS 32669424 32669561 . + 2 Parent=GSCOCT00028471001 | |
| 19567 chr1 manual_curation CDS 32669867 32669915 . + 2 Parent=GSCOCT00028471001 | |
| 19568 chr1 manual_curation CDS 32670164 32670229 . + 0 Parent=GSCOCT00028471001 | |
| 19569 chr1 manual_curation CDS 32670514 32670633 . + 0 Parent=GSCOCT00028471001 | |
| 19570 chr1 manual_curation CDS 32670732 32670845 . + 0 Parent=GSCOCT00028471001 | |
| 19571 chr1 manual_curation gene 32676743 32683264 . - . ID=GSCOCG00028473001;Name=Cc01_g14650 | |
| 19572 chr1 manual_curation mRNA 32676743 32683264 . - . ID=GSCOCT00028473001;Parent=GSCOCG00028473001;Name=Cc01_g14650 | |
| 19573 chr1 manual_curation polypeptide 32676932 32682600 . - . ID=GSCOCP00028473001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR000011,InterPro:IPR000127,InterPro:IPR000594,InterPro:IPR009036,InterPro:IPR016040,InterPro:IPR018074,InterPro:IPR018075,InterPro:IPR018965,InterPro:IPR019572,PFAM:PF00899,PFAM:PF02134,PFAM:PF09358,PFAM:PF10585,PRINTS:PR01849,PROSITE:PS00536,PROSITE:PS00865,SUPERFAMILY:SSF69572,SwissProt:P31251,SwissProt:P92974,SwissProt:P93028,TAIR:AT2G21470.2,TAIR:AT2G30110.1,TAIR:AT5G06460.1,TIGRFAMs:TIGR01408,TrEMBL:B9SKU8,TrEMBL:F6GUM1,TrEMBL:I1JHG1;Derives_from=GSCOCT00028473001;Name=Cc01_g14650;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0005524,GO:0006464,GO:0008152,GO:0008641,CC_EC_number:missing_EC_number,PRODUCT:Ubiquitin-activating enzyme E1 1,CC_functional_completeness:complete,CC_gene:UBA1,CC_gene:UBA2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028473001~ Ubiquitin-activating enzyme E1 1~ UBA1~ complete;original_location=complement(join(2494668..2495061%2C2493728..2493945%2C2491874..2492668%2C2490788..2491656%2C2490252..2490684%2C2489393..2489989));owner=coffea | |
| 19574 chr1 manual_curation exon 32682873 32683264 . - . Parent=GSCOCT00028473001 | |
| 19575 chr1 manual_curation exon 32676743 32677528 . - . Parent=GSCOCT00028473001 | |
| 19576 chr1 manual_curation exon 32677791 32678223 . - . Parent=GSCOCT00028473001 | |
| 19577 chr1 manual_curation exon 32678327 32679195 . - . Parent=GSCOCT00028473001 | |
| 19578 chr1 manual_curation exon 32679413 32680207 . - . Parent=GSCOCT00028473001 | |
| 19579 chr1 manual_curation exon 32681267 32681484 . - . Parent=GSCOCT00028473001 | |
| 19580 chr1 manual_curation exon 32682207 32682616 . - . Parent=GSCOCT00028473001 | |
| 19581 chr1 manual_curation CDS 32676932 32677528 . - 0 Parent=GSCOCT00028473001 | |
| 19582 chr1 manual_curation CDS 32677791 32678223 . - 2 Parent=GSCOCT00028473001 | |
| 19583 chr1 manual_curation CDS 32678327 32679195 . - 0 Parent=GSCOCT00028473001 | |
| 19584 chr1 manual_curation CDS 32679413 32680207 . - 0 Parent=GSCOCT00028473001 | |
| 19585 chr1 manual_curation CDS 32681267 32681484 . - 1 Parent=GSCOCT00028473001 | |
| 19586 chr1 manual_curation CDS 32682207 32682600 . - 0 Parent=GSCOCT00028473001 | |
| 19587 chr1 manual_curation gene 32686569 32689909 . - . ID=GSCOCG00028474001;Name=Cc01_g14660 | |
| 19588 chr1 manual_curation mRNA 32686569 32689909 . - . ID=GSCOCT00028474001;Parent=GSCOCG00028474001;Name=Cc01_g14660 | |
| 19589 chr1 manual_curation polypeptide 32686810 32689773 . - . ID=GSCOCP00028474001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR011009,InterPro:IPR020635,PFAM:PF07714,PRINTS:PR00109,PROFILE:PS50011,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q2MHE4,SwissProt:Q59H18,SwissProt:Q7TQP6,TAIR:AT4G38470.1,TAIR:AT5G07140.1,TAIR:AT5G58520.1,TrEMBL:B9SKV0,TrEMBL:D7SJT1,TrEMBL:I1JHG3;Derives_from=GSCOCT00028474001;Name=Cc01_g14660;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.10.2,PRODUCT:Protein kinase superfamily protein,CC_functional_completeness:complete,CC_gene:HT1,CC_gene:Tnni3k,CC_gene:TNNI3K;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028474001~ Protein kinase superfamily protein~ HT1~ complete;original_location=complement(join(2501831..2502234%2C2500467..2501550%2C2499271..2499552));owner=coffea | |
| 19590 chr1 manual_curation exon 32686569 32687091 . - . Parent=GSCOCT00028474001 | |
| 19591 chr1 manual_curation exon 32688006 32689089 . - . Parent=GSCOCT00028474001 | |
| 19592 chr1 manual_curation exon 32689370 32689909 . - . Parent=GSCOCT00028474001 | |
| 19593 chr1 manual_curation CDS 32686810 32687091 . - 0 Parent=GSCOCT00028474001 | |
| 19594 chr1 manual_curation CDS 32688006 32689089 . - 2 Parent=GSCOCT00028474001 | |
| 19595 chr1 manual_curation CDS 32689370 32689773 . - 0 Parent=GSCOCT00028474001 | |
| 19596 chr1 manual_curation gene 32698584 32710742 . + . ID=GSCOCG00028475001;Name=Cc01_g14670 | |
| 19597 chr1 manual_curation mRNA 32698584 32710742 . + . ID=GSCOCT00028475001;Parent=GSCOCG00028475001;Name=Cc01_g14670 | |
| 19598 chr1 manual_curation polypeptide 32698653 32710228 . + . ID=GSCOCP00028475001;Dbxref=SwissProt:Q15042,SwissProt:Q642R9,SwissProt:Q80UJ7,TAIR:AT5G55060.1,TAIR:AT5G58510.1,TrEMBL:B9HNA7,TrEMBL:B9SKV1,TrEMBL:F6GUM0;Derives_from=GSCOCT00028475001;Name=Cc01_g14670;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Rab3 GTPase-activating protein catalytic subunit,CC_functional_completeness:complete,CC_gene:RAB3GAP1,CC_gene:rab3gap1,CC_gene:Rab3gap1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028475001~ Putative Rab3 GTPase-activating protein catalytic subunit~ RAB3GAP1~ complete;original_location=join(2511114..2511226%2C2511441..2511518%2C2511667..2511730%2C2512252..2512366%2C2512455..2512522%2C2512629..2512726%2C2513567..2513738%2C2514260..2514479%2C2514816..2514942%2C2515178..2515284%2C2515440..2515532%2C2516213..2516344%2C2516468..2516601%2C2516870..2516953%2C2517073..2517146%2C2518646..2518832%2C2518923..2518994%2C2519667..2519706%2C2520577..2520854%2C2521540..2521717%2C2521804..2522015%2C2522387..2522689);owner=coffea | |
| 19599 chr1 manual_curation exon 32698584 32698765 . + . Parent=GSCOCT00028475001 | |
| 19600 chr1 manual_curation exon 32698980 32699057 . + . Parent=GSCOCT00028475001 | |
| 19601 chr1 manual_curation exon 32699206 32699269 . + . Parent=GSCOCT00028475001 | |
| 19602 chr1 manual_curation exon 32699791 32699905 . + . Parent=GSCOCT00028475001 | |
| 19603 chr1 manual_curation exon 32699994 32700061 . + . Parent=GSCOCT00028475001 | |
| 19604 chr1 manual_curation exon 32700168 32700265 . + . Parent=GSCOCT00028475001 | |
| 19605 chr1 manual_curation exon 32701106 32701277 . + . Parent=GSCOCT00028475001 | |
| 19606 chr1 manual_curation exon 32701799 32702018 . + . Parent=GSCOCT00028475001 | |
| 19607 chr1 manual_curation exon 32702355 32702481 . + . Parent=GSCOCT00028475001 | |
| 19608 chr1 manual_curation exon 32702717 32702823 . + . Parent=GSCOCT00028475001 | |
| 19609 chr1 manual_curation exon 32702979 32703071 . + . Parent=GSCOCT00028475001 | |
| 19610 chr1 manual_curation exon 32703752 32703883 . + . Parent=GSCOCT00028475001 | |
| 19611 chr1 manual_curation exon 32704007 32704140 . + . Parent=GSCOCT00028475001 | |
| 19612 chr1 manual_curation exon 32704409 32704492 . + . Parent=GSCOCT00028475001 | |
| 19613 chr1 manual_curation exon 32704612 32704685 . + . Parent=GSCOCT00028475001 | |
| 19614 chr1 manual_curation exon 32706185 32706371 . + . Parent=GSCOCT00028475001 | |
| 19615 chr1 manual_curation exon 32706462 32706533 . + . Parent=GSCOCT00028475001 | |
| 19616 chr1 manual_curation exon 32707206 32707245 . + . Parent=GSCOCT00028475001 | |
| 19617 chr1 manual_curation exon 32708116 32708393 . + . Parent=GSCOCT00028475001 | |
| 19618 chr1 manual_curation exon 32709079 32709256 . + . Parent=GSCOCT00028475001 | |
| 19619 chr1 manual_curation exon 32709343 32709554 . + . Parent=GSCOCT00028475001 | |
| 19620 chr1 manual_curation exon 32709926 32710742 . + . Parent=GSCOCT00028475001 | |
| 19621 chr1 manual_curation CDS 32698653 32698765 . + 0 Parent=GSCOCT00028475001 | |
| 19622 chr1 manual_curation CDS 32698980 32699057 . + 2 Parent=GSCOCT00028475001 | |
| 19623 chr1 manual_curation CDS 32699206 32699269 . + 2 Parent=GSCOCT00028475001 | |
| 19624 chr1 manual_curation CDS 32699791 32699905 . + 0 Parent=GSCOCT00028475001 | |
| 19625 chr1 manual_curation CDS 32699994 32700061 . + 1 Parent=GSCOCT00028475001 | |
| 19626 chr1 manual_curation CDS 32700168 32700265 . + 0 Parent=GSCOCT00028475001 | |
| 19627 chr1 manual_curation CDS 32701106 32701277 . + 2 Parent=GSCOCT00028475001 | |
| 19628 chr1 manual_curation CDS 32701799 32702018 . + 0 Parent=GSCOCT00028475001 | |
| 19629 chr1 manual_curation CDS 32702355 32702481 . + 1 Parent=GSCOCT00028475001 | |
| 19630 chr1 manual_curation CDS 32702717 32702823 . + 2 Parent=GSCOCT00028475001 | |
| 19631 chr1 manual_curation CDS 32702979 32703071 . + 1 Parent=GSCOCT00028475001 | |
| 19632 chr1 manual_curation CDS 32703752 32703883 . + 1 Parent=GSCOCT00028475001 | |
| 19633 chr1 manual_curation CDS 32704007 32704140 . + 1 Parent=GSCOCT00028475001 | |
| 19634 chr1 manual_curation CDS 32704409 32704492 . + 0 Parent=GSCOCT00028475001 | |
| 19635 chr1 manual_curation CDS 32704612 32704685 . + 0 Parent=GSCOCT00028475001 | |
| 19636 chr1 manual_curation CDS 32706185 32706371 . + 2 Parent=GSCOCT00028475001 | |
| 19637 chr1 manual_curation CDS 32706462 32706533 . + 0 Parent=GSCOCT00028475001 | |
| 19638 chr1 manual_curation CDS 32707206 32707245 . + 0 Parent=GSCOCT00028475001 | |
| 19639 chr1 manual_curation CDS 32708116 32708393 . + 1 Parent=GSCOCT00028475001 | |
| 19640 chr1 manual_curation CDS 32709079 32709256 . + 0 Parent=GSCOCT00028475001 | |
| 19641 chr1 manual_curation CDS 32709343 32709554 . + 1 Parent=GSCOCT00028475001 | |
| 19642 chr1 manual_curation CDS 32709926 32710228 . + 0 Parent=GSCOCT00028475001 | |
| 19643 chr1 manual_curation gene 32723388 32725387 . + . ID=GSCOCG00028476001;Name=Cc01_g14680 | |
| 19644 chr1 manual_curation mRNA 32723388 32725387 . + . ID=GSCOCT00028476001;Parent=GSCOCG00028476001;Name=Cc01_g14680 | |
| 19645 chr1 manual_curation polypeptide 32723933 32724607 . + . ID=GSCOCP00028476001;Dbxref=InterPro:IPR006936,PFAM:PF04852,TAIR:AT1G07090.1,TAIR:AT2G42610.1,TAIR:AT5G58500.1,TrEMBL:B9HNA6,TrEMBL:I1LLR4,TrEMBL:Q9LMK2;Derives_from=GSCOCT00028476001;Name=Cc01_g14680;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF640),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028476001~ Protein of unknown function (DUF640)~ unknown_gene~ complete;original_location=2536394..2537068;owner=coffea | |
| 19646 chr1 manual_curation exon 32723388 32725387 . + . Parent=GSCOCT00028476001 | |
| 19647 chr1 manual_curation CDS 32723933 32724607 . + 0 Parent=GSCOCT00028476001 | |
| 19648 chr1 manual_curation gene 32732538 32736663 . - . ID=GSCOCG00028478001;Name=Cc01_g14690 | |
| 19649 chr1 manual_curation mRNA 32732538 32736663 . - . ID=GSCOCT00028478001;Parent=GSCOCG00028478001;Name=Cc01_g14690 | |
| 19650 chr1 manual_curation polypeptide 32732884 32736333 . - . ID=GSCOCP00028478001;Dbxref=InterPro:IPR004911,PANTHER:PTHR13234,PFAM:PF03227,SwissProt:A6QPN6,SwissProt:Q499T2,SwissProt:Q9ESY9,TAIR:AT1G07080.1,TAIR:AT4G12890.1,TAIR:AT5G01580.1,TrEMBL:A5AXM4,TrEMBL:B9HNA5,TrEMBL:D7SJS7;Derives_from=GSCOCT00028478001;Name=Cc01_g14690;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Thioredoxin superfamily protein,CC_functional_completeness:complete,CC_gene:Ifi30,CC_gene:IFI30;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028478001~ Thioredoxin superfamily protein~ Ifi30~ complete;original_location=complement(join(2548576..2548794%2C2546937..2547002%2C2546203..2546343%2C2545896..2545988%2C2545345..2545569));owner=coffea | |
| 19651 chr1 manual_curation exon 32732538 32733108 . - . Parent=GSCOCT00028478001 | |
| 19652 chr1 manual_curation exon 32733435 32733527 . - . Parent=GSCOCT00028478001 | |
| 19653 chr1 manual_curation exon 32733742 32733882 . - . Parent=GSCOCT00028478001 | |
| 19654 chr1 manual_curation exon 32734476 32734541 . - . Parent=GSCOCT00028478001 | |
| 19655 chr1 manual_curation exon 32736115 32736663 . - . Parent=GSCOCT00028478001 | |
| 19656 chr1 manual_curation CDS 32732884 32733108 . - 0 Parent=GSCOCT00028478001 | |
| 19657 chr1 manual_curation CDS 32733435 32733527 . - 0 Parent=GSCOCT00028478001 | |
| 19658 chr1 manual_curation CDS 32733742 32733882 . - 0 Parent=GSCOCT00028478001 | |
| 19659 chr1 manual_curation CDS 32734476 32734541 . - 0 Parent=GSCOCT00028478001 | |
| 19660 chr1 manual_curation CDS 32736115 32736333 . - 0 Parent=GSCOCT00028478001 | |
| 19661 chr1 manual_curation gene 32737131 32740720 . - . ID=GSCOCG00028479001;Name=Cc01_g14700 | |
| 19662 chr1 manual_curation mRNA 32737131 32740720 . - . ID=GSCOCT00028479001;Parent=GSCOCG00028479001;Name=Cc01_g14700 | |
| 19663 chr1 manual_curation polypeptide 32737412 32740555 . - . ID=GSCOCP00028479001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR001509,InterPro:IPR016040,PFAM:PF01370,SwissProt:P51104,SwissProt:P51110,SwissProt:Q9XES5,TAIR:AT1G51410.1,TAIR:AT2G02400.1,TAIR:AT5G58490.1,TrEMBL:B9SKV5,TrEMBL:C3VPA5,TrEMBL:D7SJS6;Derives_from=GSCOCT00028479001;Name=Cc01_g14700;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,GO:0044237,GO:0050662,CC_EC_number:1.1.1.219,PRODUCT:Putative Dihydroflavonol-4-reductase,CC_functional_completeness:complete,CC_gene:DFR,CC_gene:A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028479001~ Putative Dihydroflavonol-4-reductase~ DFR~ complete;original_location=complement(join(2552899..2553016%2C2552582..2552754%2C2552271..2552456%2C2551666..2551828%2C2551104..2551290%2C2549873..2550017));owner=coffea | |
| 19664 chr1 manual_curation exon 32737131 32737556 . - . Parent=GSCOCT00028479001 | |
| 19665 chr1 manual_curation exon 32738643 32738829 . - . Parent=GSCOCT00028479001 | |
| 19666 chr1 manual_curation exon 32739205 32739367 . - . Parent=GSCOCT00028479001 | |
| 19667 chr1 manual_curation exon 32739810 32739995 . - . Parent=GSCOCT00028479001 | |
| 19668 chr1 manual_curation exon 32740121 32740293 . - . Parent=GSCOCT00028479001 | |
| 19669 chr1 manual_curation exon 32740438 32740720 . - . Parent=GSCOCT00028479001 | |
| 19670 chr1 manual_curation CDS 32737412 32737556 . - 2 Parent=GSCOCT00028479001 | |
| 19671 chr1 manual_curation CDS 32738643 32738829 . - 1 Parent=GSCOCT00028479001 | |
| 19672 chr1 manual_curation CDS 32739205 32739367 . - 0 Parent=GSCOCT00028479001 | |
| 19673 chr1 manual_curation CDS 32739810 32739995 . - 0 Parent=GSCOCT00028479001 | |
| 19674 chr1 manual_curation CDS 32740121 32740293 . - 1 Parent=GSCOCT00028479001 | |
| 19675 chr1 manual_curation CDS 32740438 32740555 . - 0 Parent=GSCOCT00028479001 | |
| 19676 chr1 manual_curation gene 32747810 32757411 . + . ID=GSCOCG00028481001;Name=Cc01_g14710 | |
| 19677 chr1 manual_curation mRNA 32747810 32757411 . + . ID=GSCOCT00028481001;Parent=GSCOCG00028481001;Name=Cc01_g14710 | |
| 19678 chr1 manual_curation polypeptide 32747946 32756008 . + . ID=GSCOCP00028481001;Dbxref=GENE3D:G3DSA:3.20.20.80,GENE3D:G3DSA:3.30.70.330,InterPro:IPR000490,InterPro:IPR000504,InterPro:IPR001876,InterPro:IPR012677,InterPro:IPR012946,InterPro:IPR013781,InterPro:IPR017853,PFAM:PF00076,PFAM:PF00332,PFAM:PF00641,PFAM:PF07983,PROFILE:PS50102,PROFILE:PS50199,PROSITE:PS01358,SMART:SM00360,SMART:SM00547,SMART:SM00768,SUPERFAMILY:SSF51445,SwissProt:Q93Z08,SwissProt:Q9FGH4,SwissProt:Q9M088,TAIR:AT4G17180.1,TAIR:AT4G31140.1,TAIR:AT5G58480.1,TrEMBL:B9HNA2,TrEMBL:F6HHN9,TrEMBL:I1LLR7;Derives_from=GSCOCT00028481001;Name=Cc01_g14710;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,GO:0003824,GO:0005622,GO:0005975,GO:0008270,GO:0043169,CC_EC_number:3.2.1.39,PRODUCT:Glucan endo-1%2C3-beta-glucosidase 9,CC_functional_completeness:modules,CC_gene:At5g58480,CC_gene:At4g31140,CC_gene:At5g58090;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028481001~ Glucan endo-1%2C3-beta-glucosidase 9~ At5g58480~ modules;original_location=join(2560407..2560765%2C2562137..2563249%2C2563489..2563535%2C2564918..2565235%2C2565365..2565515%2C2565835..2566465%2C2566757..2566907%2C2566987..2567068%2C2568355..2568469);owner=coffea | |
| 19679 chr1 manual_curation exon 32747810 32748304 . + . Parent=GSCOCT00028481001 | |
| 19680 chr1 manual_curation exon 32749676 32750788 . + . Parent=GSCOCT00028481001 | |
| 19681 chr1 manual_curation exon 32751028 32751074 . + . Parent=GSCOCT00028481001 | |
| 19682 chr1 manual_curation exon 32752457 32752774 . + . Parent=GSCOCT00028481001 | |
| 19683 chr1 manual_curation exon 32752904 32753054 . + . Parent=GSCOCT00028481001 | |
| 19684 chr1 manual_curation exon 32753374 32754004 . + . Parent=GSCOCT00028481001 | |
| 19685 chr1 manual_curation exon 32754296 32754446 . + . Parent=GSCOCT00028481001 | |
| 19686 chr1 manual_curation exon 32754526 32754607 . + . Parent=GSCOCT00028481001 | |
| 19687 chr1 manual_curation exon 32755894 32757411 . + . Parent=GSCOCT00028481001 | |
| 19688 chr1 manual_curation CDS 32747946 32748304 . + 0 Parent=GSCOCT00028481001 | |
| 19689 chr1 manual_curation CDS 32749676 32750788 . + 2 Parent=GSCOCT00028481001 | |
| 19690 chr1 manual_curation CDS 32751028 32751074 . + 2 Parent=GSCOCT00028481001 | |
| 19691 chr1 manual_curation CDS 32752457 32752774 . + 1 Parent=GSCOCT00028481001 | |
| 19692 chr1 manual_curation CDS 32752904 32753054 . + 1 Parent=GSCOCT00028481001 | |
| 19693 chr1 manual_curation CDS 32753374 32754004 . + 2 Parent=GSCOCT00028481001 | |
| 19694 chr1 manual_curation CDS 32754296 32754446 . + 0 Parent=GSCOCT00028481001 | |
| 19695 chr1 manual_curation CDS 32754526 32754607 . + 1 Parent=GSCOCT00028481001 | |
| 19696 chr1 manual_curation CDS 32755894 32756008 . + 2 Parent=GSCOCT00028481001 | |
| 19697 chr1 manual_curation gene 32760427 32764709 . - . ID=GSCOCG00028482001;Name=Cc01_g14720 | |
| 19698 chr1 manual_curation mRNA 32760427 32764709 . - . ID=GSCOCT00028482001;Parent=GSCOCG00028482001;Name=Cc01_g14720 | |
| 19699 chr1 manual_curation polypeptide 32761036 32763751 . - . ID=GSCOCP00028482001;Dbxref=TrEMBL:B9S5C1,TrEMBL:D7SJS1,TrEMBL:G7KEC9;Derives_from=GSCOCT00028482001;Name=Cc01_g14720;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028482001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=complement(join(2576178..2576212%2C2575315..2575487%2C2575125..2575201%2C2573497..2573598));owner=coffea | |
| 19700 chr1 manual_curation exon 32760427 32761137 . - . Parent=GSCOCT00028482001 | |
| 19701 chr1 manual_curation exon 32762664 32762740 . - . Parent=GSCOCT00028482001 | |
| 19702 chr1 manual_curation exon 32762854 32763026 . - . Parent=GSCOCT00028482001 | |
| 19703 chr1 manual_curation exon 32763717 32764709 . - . Parent=GSCOCT00028482001 | |
| 19704 chr1 manual_curation CDS 32761036 32761137 . - 0 Parent=GSCOCT00028482001 | |
| 19705 chr1 manual_curation CDS 32762664 32762740 . - 1 Parent=GSCOCT00028482001 | |
| 19706 chr1 manual_curation CDS 32762854 32763026 . - 2 Parent=GSCOCT00028482001 | |
| 19707 chr1 manual_curation CDS 32763717 32763751 . - 0 Parent=GSCOCT00028482001 | |
| 19708 chr1 manual_curation gene 32769249 32772643 . + . ID=GSCOCG00028483001;Name=Cc01_g14730 | |
| 19709 chr1 manual_curation mRNA 32769249 32772643 . + . ID=GSCOCT00028483001;Parent=GSCOCG00028483001;Name=Cc01_g14730 | |
| 19710 chr1 manual_curation polypeptide 32769249 32772643 . + . ID=GSCOCP00028483001;Dbxref=TAIR:AT1G07060.1,TrEMBL:F6GUL6,TrEMBL:G7J0R2,TrEMBL:G7J0R3;Derives_from=GSCOCT00028483001;Name=Cc01_g14730;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028483001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=join(2581710..2581768%2C2581862..2582069%2C2582791..2582934%2C2583692..2583833%2C2584944..2585104);owner=coffea | |
| 19711 chr1 manual_curation exon 32769249 32769307 . + . Parent=GSCOCT00028483001 | |
| 19712 chr1 manual_curation exon 32769401 32769608 . + . Parent=GSCOCT00028483001 | |
| 19713 chr1 manual_curation exon 32770330 32770473 . + . Parent=GSCOCT00028483001 | |
| 19714 chr1 manual_curation exon 32771231 32771372 . + . Parent=GSCOCT00028483001 | |
| 19715 chr1 manual_curation exon 32772483 32772643 . + . Parent=GSCOCT00028483001 | |
| 19716 chr1 manual_curation CDS 32769249 32769307 . + 0 Parent=GSCOCT00028483001 | |
| 19717 chr1 manual_curation CDS 32769401 32769608 . + 2 Parent=GSCOCT00028483001 | |
| 19718 chr1 manual_curation CDS 32770330 32770473 . + 0 Parent=GSCOCT00028483001 | |
| 19719 chr1 manual_curation CDS 32771231 32771372 . + 0 Parent=GSCOCT00028483001 | |
| 19720 chr1 manual_curation CDS 32772483 32772643 . + 1 Parent=GSCOCT00028483001 | |
| 19721 chr1 manual_curation gene 32776652 32777544 . + . ID=GSCOCG00028484001;Name=Cc01_g14740 | |
| 19722 chr1 manual_curation mRNA 32776652 32777544 . + . ID=GSCOCT00028484001;Parent=GSCOCG00028484001;Name=Cc01_g14740 | |
| 19723 chr1 manual_curation polypeptide 32776739 32777461 . + . ID=GSCOCP00028484001;Dbxref=InterPro:IPR004883,PFAM:PF03195,PROFILE:PS50891,SwissProt:Q8LBW3,SwissProt:Q9LQR0,SwissProt:Q9SK08,TAIR:AT1G07900.1,TAIR:AT2G28500.1,TAIR:AT2G30130.1,TrEMBL:A5CBH8,TrEMBL:B9GH62,TrEMBL:D7SJR8;Derives_from=GSCOCT00028484001;Name=Cc01_g14740;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:LOB domain-containing protein 12,CC_functional_completeness:complete,CC_gene:LBD12,CC_gene:LBD11,CC_gene:LBD1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028484001~ LOB domain-containing protein 12~ LBD12~ complete;original_location=join(2589200..2589355%2C2589581..2589922);owner=coffea | |
| 19724 chr1 manual_curation exon 32776652 32776894 . + . Parent=GSCOCT00028484001 | |
| 19725 chr1 manual_curation exon 32777120 32777544 . + . Parent=GSCOCT00028484001 | |
| 19726 chr1 manual_curation CDS 32776739 32776894 . + 0 Parent=GSCOCT00028484001 | |
| 19727 chr1 manual_curation CDS 32777120 32777461 . + 0 Parent=GSCOCT00028484001 | |
| 19728 chr1 manual_curation gene 32782556 32784307 . + . ID=GSCOCG00028485001;Name=Cc01_g14750 | |
| 19729 chr1 manual_curation mRNA 32782556 32784307 . + . ID=GSCOCT00028485001;Parent=GSCOCG00028485001;Name=Cc01_g14750 | |
| 19730 chr1 manual_curation polypeptide 32783041 32783790 . + . ID=GSCOCP00028485001;Dbxref=InterPro:IPR010402,PFAM:PF06203,PROFILE:PS51017,SwissProt:Q9C9A9,SwissProt:Q9LU68,SwissProt:Q9M9B3,TAIR:AT1G07050.1,TAIR:AT5G14370.1,TAIR:AT5G57180.2,TrEMBL:B7FH76,TrEMBL:B9GH63,TrEMBL:I1JHH1;Derives_from=GSCOCT00028485001;Name=Cc01_g14750;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Zinc finger protein CONSTANS-LIKE 7,CC_functional_completeness:fragment,CC_gene:CIA2,CC_gene:COL7,CC_gene:COL8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028485001~ Putative Zinc finger protein CONSTANS-LIKE 7~ CIA2~ fragment;original_location=join(2595502..2595717%2C2595902..2596051%2C2596210..2596251);owner=coffea | |
| 19731 chr1 manual_curation exon 32782556 32783256 . + . Parent=GSCOCT00028485001 | |
| 19732 chr1 manual_curation exon 32783441 32783590 . + . Parent=GSCOCT00028485001 | |
| 19733 chr1 manual_curation exon 32783749 32784307 . + . Parent=GSCOCT00028485001 | |
| 19734 chr1 manual_curation CDS 32783041 32783256 . + 0 Parent=GSCOCT00028485001 | |
| 19735 chr1 manual_curation CDS 32783441 32783590 . + 0 Parent=GSCOCT00028485001 | |
| 19736 chr1 manual_curation CDS 32783749 32783790 . + 0 Parent=GSCOCT00028485001 | |
| 19737 chr1 manual_curation gene 32787675 32789888 . + . ID=GSCOCG00028486001;Name=Cc01_g14760 | |
| 19738 chr1 manual_curation mRNA 32787675 32789888 . + . ID=GSCOCT00028486001;Parent=GSCOCG00028486001;Name=Cc01_g14760 | |
| 19739 chr1 manual_curation polypeptide 32787776 32789670 . + . ID=GSCOCP00028486001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,SwissProt:O64732,SwissProt:O64733,SwissProt:Q9M9E7,TAIR:AT1G78270.1,TAIR:AT2G30140.1,TAIR:AT2G30150.1,TrEMBL:B9GH64,TrEMBL:B9SRZ9,TrEMBL:D7SJR2;Derives_from=GSCOCT00028486001;Name=Cc01_g14760;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:Putative UDP-glycosyltransferase 87A1,CC_functional_completeness:complete,CC_gene:UGT87A1,CC_gene:UGT87A2,CC_gene:UGT85A4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028486001~ Putative UDP-glycosyltransferase 87A1~ UGT87A1~ complete;original_location=join(2600237..2600741%2C2601266..2602131);owner=coffea | |
| 19740 chr1 manual_curation exon 32787675 32788280 . + . Parent=GSCOCT00028486001 | |
| 19741 chr1 manual_curation exon 32788805 32789888 . + . Parent=GSCOCT00028486001 | |
| 19742 chr1 manual_curation CDS 32787776 32788280 . + 0 Parent=GSCOCT00028486001 | |
| 19743 chr1 manual_curation CDS 32788805 32789670 . + 1 Parent=GSCOCT00028486001 | |
| 19744 chr1 manual_curation gene 32790447 32792916 . + . ID=GSCOCG00028487001;Name=Cc01_g14770 | |
| 19745 chr1 manual_curation mRNA 32790447 32792916 . + . ID=GSCOCT00028487001;Parent=GSCOCG00028487001;Name=Cc01_g14770 | |
| 19746 chr1 manual_curation polypeptide 32790622 32792666 . + . ID=GSCOCP00028487001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,SwissProt:O64732,SwissProt:O64733,SwissProt:Q9SYK9,TAIR:AT1G05680.1,TAIR:AT2G30140.1,TAIR:AT2G30150.1,TrEMBL:B9GH64,TrEMBL:B9GH66,TrEMBL:B9SRZ9;Derives_from=GSCOCT00028487001;Name=Cc01_g14770;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:UDP-glycosyltransferase 87A2,CC_functional_completeness:complete,CC_gene:UGT87A2,CC_gene:UGT87A1,CC_gene:UGT74E2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028487001~ UDP-glycosyltransferase 87A2~ UGT87A2~ complete;original_location=join(2603083..2603587%2C2604238..2605127);owner=coffea | |
| 19747 chr1 manual_curation exon 32790447 32791126 . + . Parent=GSCOCT00028487001 | |
| 19748 chr1 manual_curation exon 32791777 32792916 . + . Parent=GSCOCT00028487001 | |
| 19749 chr1 manual_curation CDS 32790622 32791126 . + 0 Parent=GSCOCT00028487001 | |
| 19750 chr1 manual_curation CDS 32791777 32792666 . + 1 Parent=GSCOCT00028487001 | |
| 19751 chr1 manual_curation gene 32793717 32798053 . + . ID=GSCOCG00028488001;Name=Cc01_g14780 | |
| 19752 chr1 manual_curation mRNA 32793717 32798053 . + . ID=GSCOCT00028488001;Parent=GSCOCG00028488001;Name=Cc01_g14780 | |
| 19753 chr1 manual_curation polypeptide 32794994 32797625 . + . ID=GSCOCP00028488001;Dbxref=InterPro:IPR001993,InterPro:IPR018108,PANTHER:PTHR11896,PFAM:PF00153,PROFILE:PS50920,SUPERFAMILY:SSF103506,SwissProt:Q0VCH6,SwissProt:Q498U3,SwissProt:Q7SXW0,TAIR:AT1G07030.1,TAIR:AT2G30160.1,TrEMBL:B9GH68,TrEMBL:B9RRI4,TrEMBL:I1MBG1;Derives_from=GSCOCT00028488001;Name=Cc01_g14780;Ontology_term=CC_evidence_code:ISS,GO:0005488,GO:0006810,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Putative Solute carrier family 25 member 40,CC_functional_completeness:fragment,CC_gene:SLC25A40,CC_gene:Slc25a40,CC_gene:slc25a39;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028488001~ Putative Solute carrier family 25 member 40~ SLC25A40~ fragment;original_location=join(2607455..2607586%2C2609871..2610086);owner=coffea | |
| 19754 chr1 manual_curation exon 32793717 32795125 . + . Parent=GSCOCT00028488001 | |
| 19755 chr1 manual_curation exon 32797410 32798053 . + . Parent=GSCOCT00028488001 | |
| 19756 chr1 manual_curation CDS 32794994 32795125 . + 0 Parent=GSCOCT00028488001 | |
| 19757 chr1 manual_curation CDS 32797410 32797625 . + 0 Parent=GSCOCT00028488001 | |
| 19758 chr1 manual_curation gene 32798433 32801499 . - . ID=GSCOCG00028489001;Name=Cc01_g14790 | |
| 19759 chr1 manual_curation mRNA 32798433 32801499 . - . ID=GSCOCT00028489001;Parent=GSCOCG00028489001;Name=Cc01_g14790 | |
| 19760 chr1 manual_curation polypeptide 32798758 32801437 . - . ID=GSCOCP00028489001;Dbxref=GENE3D:G3DSA:3.60.40.10,InterPro:IPR001932,InterPro:IPR010822,PFAM:PF07228,SMART:SM00331,SMART:SM00332,SUPERFAMILY:SSF81606,SwissProt:O64730,SwissProt:Q942P9,SwissProt:Q9LVQ8,TAIR:AT2G30170.1,TAIR:AT4G16580.1,TAIR:AT5G66720.1,TrEMBL:B9RRI5,TrEMBL:G7J0N4,TrEMBL:I1MZV2;Derives_from=GSCOCT00028489001;Name=Cc01_g14790;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004721,CC_EC_number:missing_EC_number,PRODUCT:Probable protein phosphatase 2C 26,CC_functional_completeness:complete,CC_gene:At2g30170,CC_gene:Os01g0164600,CC_gene:At5g66720;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028489001~ Probable protein phosphatase 2C 26~ At2g30170~ complete;original_location=complement(join(2613741..2613898%2C2613574..2613625%2C2613316..2613395%2C2612944..2613025%2C2612509..2612579%2C2612322..2612401%2C2612110..2612207%2C2611548..2611674%2C2611381..2611463%2C2611219..2611278));owner=coffea | |
| 19761 chr1 manual_curation exon 32798433 32798817 . - . Parent=GSCOCT00028489001 | |
| 19762 chr1 manual_curation exon 32798920 32799002 . - . Parent=GSCOCT00028489001 | |
| 19763 chr1 manual_curation exon 32799087 32799213 . - . Parent=GSCOCT00028489001 | |
| 19764 chr1 manual_curation exon 32799649 32799746 . - . Parent=GSCOCT00028489001 | |
| 19765 chr1 manual_curation exon 32799861 32799940 . - . Parent=GSCOCT00028489001 | |
| 19766 chr1 manual_curation exon 32800048 32800118 . - . Parent=GSCOCT00028489001 | |
| 19767 chr1 manual_curation exon 32800483 32800564 . - . Parent=GSCOCT00028489001 | |
| 19768 chr1 manual_curation exon 32800855 32800934 . - . Parent=GSCOCT00028489001 | |
| 19769 chr1 manual_curation exon 32801113 32801164 . - . Parent=GSCOCT00028489001 | |
| 19770 chr1 manual_curation exon 32801280 32801499 . - . Parent=GSCOCT00028489001 | |
| 19771 chr1 manual_curation CDS 32798758 32798817 . - 0 Parent=GSCOCT00028489001 | |
| 19772 chr1 manual_curation CDS 32798920 32799002 . - 1 Parent=GSCOCT00028489001 | |
| 19773 chr1 manual_curation CDS 32799087 32799213 . - 0 Parent=GSCOCT00028489001 | |
| 19774 chr1 manual_curation CDS 32799649 32799746 . - 1 Parent=GSCOCT00028489001 | |
| 19775 chr1 manual_curation CDS 32799861 32799940 . - 2 Parent=GSCOCT00028489001 | |
| 19776 chr1 manual_curation CDS 32800048 32800118 . - 0 Parent=GSCOCT00028489001 | |
| 19777 chr1 manual_curation CDS 32800483 32800564 . - 2 Parent=GSCOCT00028489001 | |
| 19778 chr1 manual_curation CDS 32800855 32800934 . - 0 Parent=GSCOCT00028489001 | |
| 19779 chr1 manual_curation CDS 32801113 32801164 . - 2 Parent=GSCOCT00028489001 | |
| 19780 chr1 manual_curation CDS 32801280 32801437 . - 0 Parent=GSCOCT00028489001 | |
| 19781 chr1 manual_curation gene 32801770 32802575 . + . ID=GSCOCG00028491001;Name=Cc01_g14800 | |
| 19782 chr1 manual_curation mRNA 32801770 32802575 . + . ID=GSCOCT00028491001;Parent=GSCOCG00028491001;Name=Cc01_g14800 | |
| 19783 chr1 manual_curation polypeptide 32801770 32802575 . + . ID=GSCOCP00028491001;Dbxref=TAIR:AT1G07020.1,TrEMBL:B9HN92,TrEMBL:B9SK28,TrEMBL:D7SJQ2;Derives_from=GSCOCT00028491001;Name=Cc01_g14800;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B Has 39 Blast hits to 39 proteins in 17 species,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028491001~ Putative unknown protein%3B Has 39 Blast hits to 39 proteins in 17 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 6%3B Fungi - 3%3B Plants - 28%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink).~ unknown_gene~ modules;original_location=join(2614231..2614366%2C2614534..2615036);owner=coffea | |
| 19784 chr1 manual_curation exon 32801770 32801905 . + . Parent=GSCOCT00028491001 | |
| 19785 chr1 manual_curation exon 32802073 32802575 . + . Parent=GSCOCT00028491001 | |
| 19786 chr1 manual_curation CDS 32801770 32801905 . + 0 Parent=GSCOCT00028491001 | |
| 19787 chr1 manual_curation CDS 32802073 32802575 . + 1 Parent=GSCOCT00028491001 | |
| 19788 chr1 manual_curation gene 32802805 32805606 . - . ID=GSCOCG00028492001;Name=Cc01_g14810 | |
| 19789 chr1 manual_curation mRNA 32802805 32805606 . - . ID=GSCOCT00028492001;Parent=GSCOCG00028492001;Name=Cc01_g14810 | |
| 19790 chr1 manual_curation polypeptide 32803037 32805606 . - . ID=GSCOCP00028492001;Dbxref=GENE3D:G3DSA:3.40.366.10,InterPro:IPR001227,InterPro:IPR004410,InterPro:IPR014043,InterPro:IPR016035,InterPro:IPR016036,InterPro:IPR020801,PFAM:PF00698,SMART:SM00827,SUPERFAMILY:SSF52151,SUPERFAMILY:SSF55048,SwissProt:P71019,SwissProt:Q8IVS2,SwissProt:Q8R3F5,TAIR:AT2G30200.1,TIGRFAMs:TIGR00128;Derives_from=GSCOCT00028492001;Name=Cc01_g14810;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004314,GO:0005488,GO:0006633,GO:0008152,GO:0016740,CC_EC_number:2.3.1.39,CC_EC_number:2.3.1.39,PRODUCT:Putative Malonyl-CoA-acyl carrier protein transacylase%2C mitochondrial,CC_functional_completeness:fragment,CC_gene:Mcat,CC_gene:MCAT,CC_gene:fabD;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028492001~ Putative Malonyl-CoA-acyl carrier protein transacylase%2C mitochondrial~ Mcat~ fragment;original_location=complement(join(2618038..2618067%2C2617597..2617682%2C2617411..2617477%2C2616775..2616917%2C2616548..2616596%2C2616330..2616467%2C2616135..2616215%2C2615890..2616066%2C2615700..2615786%2C2615498..2615560));owner=coffea | |
| 19791 chr1 manual_curation exon 32802805 32803099 . - . Parent=GSCOCT00028492001 | |
| 19792 chr1 manual_curation exon 32803239 32803325 . - . Parent=GSCOCT00028492001 | |
| 19793 chr1 manual_curation exon 32803429 32803605 . - . Parent=GSCOCT00028492001 | |
| 19794 chr1 manual_curation exon 32803674 32803754 . - . Parent=GSCOCT00028492001 | |
| 19795 chr1 manual_curation exon 32803869 32804006 . - . Parent=GSCOCT00028492001 | |
| 19796 chr1 manual_curation exon 32804087 32804135 . - . Parent=GSCOCT00028492001 | |
| 19797 chr1 manual_curation exon 32804314 32804456 . - . Parent=GSCOCT00028492001 | |
| 19798 chr1 manual_curation exon 32804950 32805016 . - . Parent=GSCOCT00028492001 | |
| 19799 chr1 manual_curation exon 32805136 32805221 . - . Parent=GSCOCT00028492001 | |
| 19800 chr1 manual_curation exon 32805577 32805606 . - . Parent=GSCOCT00028492001 | |
| 19801 chr1 manual_curation CDS 32803037 32803099 . - 0 Parent=GSCOCT00028492001 | |
| 19802 chr1 manual_curation CDS 32803239 32803325 . - 0 Parent=GSCOCT00028492001 | |
| 19803 chr1 manual_curation CDS 32803429 32803605 . - 0 Parent=GSCOCT00028492001 | |
| 19804 chr1 manual_curation CDS 32803674 32803754 . - 0 Parent=GSCOCT00028492001 | |
| 19805 chr1 manual_curation CDS 32803869 32804006 . - 0 Parent=GSCOCT00028492001 | |
| 19806 chr1 manual_curation CDS 32804087 32804135 . - 2 Parent=GSCOCT00028492001 | |
| 19807 chr1 manual_curation CDS 32804314 32804456 . - 0 Parent=GSCOCT00028492001 | |
| 19808 chr1 manual_curation CDS 32804950 32805016 . - 2 Parent=GSCOCT00028492001 | |
| 19809 chr1 manual_curation CDS 32805136 32805221 . - 0 Parent=GSCOCT00028492001 | |
| 19810 chr1 manual_curation CDS 32805577 32805606 . - 0 Parent=GSCOCT00028492001 | |
| 19811 chr1 manual_curation gene 32807412 32812287 . - . ID=GSCOCG00028495001;Name=Cc01_g14820 | |
| 19812 chr1 manual_curation mRNA 32807412 32812287 . - . ID=GSCOCT00028495001;Parent=GSCOCG00028495001;Name=Cc01_g14820 | |
| 19813 chr1 manual_curation polypeptide 32807971 32812287 . - . ID=GSCOCP00028495001;Dbxref=InterPro:IPR004843,PFAM:PF00149,SwissProt:O74480,SwissProt:Q944L7,TAIR:AT1G07010.3,TAIR:AT1G18480.1,TrEMBL:B9HN90,TrEMBL:B9RFE2,TrEMBL:D7SJP9;Derives_from=GSCOCT00028495001;Name=Cc01_g14820;Ontology_term=CC_evidence_code:ISS,GO:0016787,CC_EC_number:missing_EC_number,PRODUCT:Calcineurin-like metallo-phosphoesterase superfamily protein,CC_functional_completeness:complete,CC_gene:At1g18480,CC_gene:SPCC1840.07c;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028495001~ Calcineurin-like metallo-phosphoesterase superfamily protein~ At1g18480~ complete;original_location=complement(join(2624430..2624748%2C2623286..2623386%2C2623049..2623162%2C2622552..2622764%2C2622029..2622164%2C2621766..2621941%2C2621356..2621444%2C2621130..2621199%2C2620432..2620518));owner=coffea | |
| 19814 chr1 manual_curation exon 32807412 32807700 . - . Parent=GSCOCT00028495001 | |
| 19815 chr1 manual_curation exon 32807938 32808057 . - . Parent=GSCOCT00028495001 | |
| 19816 chr1 manual_curation exon 32808669 32808738 . - . Parent=GSCOCT00028495001 | |
| 19817 chr1 manual_curation exon 32808895 32808983 . - . Parent=GSCOCT00028495001 | |
| 19818 chr1 manual_curation exon 32809305 32809480 . - . Parent=GSCOCT00028495001 | |
| 19819 chr1 manual_curation exon 32809568 32809703 . - . Parent=GSCOCT00028495001 | |
| 19820 chr1 manual_curation exon 32810091 32810303 . - . Parent=GSCOCT00028495001 | |
| 19821 chr1 manual_curation exon 32810588 32810701 . - . Parent=GSCOCT00028495001 | |
| 19822 chr1 manual_curation exon 32810825 32810925 . - . Parent=GSCOCT00028495001 | |
| 19823 chr1 manual_curation exon 32811969 32812287 . - . Parent=GSCOCT00028495001 | |
| 19824 chr1 manual_curation CDS 32807971 32808057 . - 0 Parent=GSCOCT00028495001 | |
| 19825 chr1 manual_curation CDS 32808669 32808738 . - 2 Parent=GSCOCT00028495001 | |
| 19826 chr1 manual_curation CDS 32808895 32808983 . - 0 Parent=GSCOCT00028495001 | |
| 19827 chr1 manual_curation CDS 32809305 32809480 . - 1 Parent=GSCOCT00028495001 | |
| 19828 chr1 manual_curation CDS 32809568 32809703 . - 0 Parent=GSCOCT00028495001 | |
| 19829 chr1 manual_curation CDS 32810091 32810303 . - 0 Parent=GSCOCT00028495001 | |
| 19830 chr1 manual_curation CDS 32810588 32810701 . - 0 Parent=GSCOCT00028495001 | |
| 19831 chr1 manual_curation CDS 32810825 32810925 . - 1 Parent=GSCOCT00028495001 | |
| 19832 chr1 manual_curation CDS 32811969 32812287 . - 0 Parent=GSCOCT00028495001 | |
| 19833 chr1 manual_curation gene 32837060 32839737 . + . ID=GSCOCG00028499001;Name=Cc01_g14830 | |
| 19834 chr1 manual_curation mRNA 32837060 32839737 . + . ID=GSCOCT00028499001;Parent=GSCOCG00028499001;Name=Cc01_g14830 | |
| 19835 chr1 manual_curation polypeptide 32837060 32839737 . + . ID=GSCOCP00028499001;Dbxref=InterPro:IPR006153,PFAM:PF00999,SwissProt:Q1HDT2,SwissProt:Q9FGH6,SwissProt:Q9SIT5,TAIR:AT2G13620.1,TAIR:AT5G37060.1,TAIR:AT5G58460.1,TrEMBL:A5C6U1,TrEMBL:D7SJP8,TrEMBL:I1MZV1;Derives_from=GSCOCT00028499001;Name=Cc01_g14830;Ontology_term=CC_evidence_code:ISS,GO:0006812,GO:0015299,GO:0016021,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Putative Cation/H( ) antiporter 25,CC_functional_completeness:complete,CC_gene:CHX25,CC_gene:CHX24,CC_gene:CHX15;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028499001~ Putative Cation/H( ) antiporter 25~ CHX25~ complete;original_location=join(2649521..2649748%2C2649983..2650987%2C2651092..2652198);owner=coffea | |
| 19836 chr1 manual_curation exon 32837060 32837287 . + . Parent=GSCOCT00028499001 | |
| 19837 chr1 manual_curation exon 32837522 32838526 . + . Parent=GSCOCT00028499001 | |
| 19838 chr1 manual_curation exon 32838631 32839737 . + . Parent=GSCOCT00028499001 | |
| 19839 chr1 manual_curation CDS 32837060 32837287 . + 0 Parent=GSCOCT00028499001 | |
| 19840 chr1 manual_curation CDS 32837522 32838526 . + 0 Parent=GSCOCT00028499001 | |
| 19841 chr1 manual_curation CDS 32838631 32839737 . + 0 Parent=GSCOCT00028499001 | |
| 19842 chr1 manual_curation gene 32841343 32845458 . - . ID=GSCOCG00028500001;Name=Cc01_g14840 | |
| 19843 chr1 manual_curation mRNA 32841343 32845458 . - . ID=GSCOCT00028500001;Parent=GSCOCG00028500001;Name=Cc01_g14840 | |
| 19844 chr1 manual_curation polypeptide 32841343 32845458 . - . ID=GSCOCP00028500001;Dbxref=GENE3D:G3DSA:2.60.40.420,InterPro:IPR001117,InterPro:IPR002355,InterPro:IPR008972,InterPro:IPR011706,InterPro:IPR011707,InterPro:IPR017761,PFAM:PF00394,PFAM:PF07731,PFAM:PF07732,PROSITE:PS00079,PROSITE:PS00080,SUPERFAMILY:SSF49503,SwissProt:Q56YT0,SwissProt:Q9FLB5,SwissProt:Q9SIY8,TAIR:AT2G30210.1,TAIR:AT2G40370.1,TAIR:AT5G05390.1,TIGRFAMs:TIGR03389,TrEMBL:B9RRH6,TrEMBL:D7T4I6,TrEMBL:F6GUI5;Derives_from=GSCOCT00028500001;Name=Cc01_g14840;Ontology_term=CC_evidence_code:ISS,GO:0005507,GO:0008471,GO:0016491,GO:0046274,GO:0048046,GO:0055114,CC_EC_number:1.10.3.3,PRODUCT:Laccase-3,CC_functional_completeness:complete,CC_gene:LAC3,CC_gene:LAC5,CC_gene:LAC12;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028500001~ Laccase-3~ LAC3~ complete;original_location=complement(join(2657821..2657919%2C2657572..2657723%2C2656721..2656968%2C2656402..2656584%2C2654019..2654975%2C2653804..2653934));owner=coffea | |
| 19845 chr1 manual_curation exon 32841343 32841473 . - . Parent=GSCOCT00028500001 | |
| 19846 chr1 manual_curation exon 32841558 32842514 . - . Parent=GSCOCT00028500001 | |
| 19847 chr1 manual_curation exon 32843941 32844123 . - . Parent=GSCOCT00028500001 | |
| 19848 chr1 manual_curation exon 32844260 32844507 . - . Parent=GSCOCT00028500001 | |
| 19849 chr1 manual_curation exon 32845111 32845262 . - . Parent=GSCOCT00028500001 | |
| 19850 chr1 manual_curation exon 32845360 32845458 . - . Parent=GSCOCT00028500001 | |
| 19851 chr1 manual_curation CDS 32841343 32841473 . - 1 Parent=GSCOCT00028500001 | |
| 19852 chr1 manual_curation CDS 32841558 32842514 . - 1 Parent=GSCOCT00028500001 | |
| 19853 chr1 manual_curation CDS 32843941 32844123 . - 1 Parent=GSCOCT00028500001 | |
| 19854 chr1 manual_curation CDS 32844260 32844507 . - 2 Parent=GSCOCT00028500001 | |
| 19855 chr1 manual_curation CDS 32845111 32845262 . - 0 Parent=GSCOCT00028500001 | |
| 19856 chr1 manual_curation CDS 32845360 32845458 . - 0 Parent=GSCOCT00028500001 | |
| 19857 chr1 manual_curation gene 32846332 32862058 . - . ID=GSCOCG00028501001;Name=Cc01_g14850 | |
| 19858 chr1 manual_curation mRNA 32846332 32862058 . - . ID=GSCOCT00028501001;Parent=GSCOCG00028501001;Name=Cc01_g14850 | |
| 19859 chr1 manual_curation polypeptide 32846332 32861642 . - . ID=GSCOCP00028501001;Dbxref=GENE3D:G3DSA:1.25.40.10,GENE3D:G3DSA:2.60.40.420,InterPro:IPR001117,InterPro:IPR002355,InterPro:IPR008972,InterPro:IPR011706,InterPro:IPR011707,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR017761,InterPro:IPR019183,InterPro:IPR019734,PFAM:PF00394,PFAM:PF07731,PFAM:PF07732,PFAM:PF09797,PROFILE:PS50005,PROFILE:PS50293,PROSITE:PS00079,PROSITE:PS00080,SMART:SM00028,SUPERFAMILY:SSF49503,SwissProt:Q56YT0,SwissProt:Q9FLB5,SwissProt:Q9SIY8,TAIR:AT2G30210.1,TAIR:AT5G05390.1,TAIR:AT5G58450.1,TIGRFAMs:TIGR03389,TrEMBL:B9I6L1,TrEMBL:B9RRH8,TrEMBL:F6GUI5;Derives_from=GSCOCT00028501001;Name=Cc01_g14850;Ontology_term=CC_evidence_code:ISS,GO:0005488,GO:0005507,GO:0008471,GO:0016491,GO:0046274,GO:0048046,GO:0055114,CC_EC_number:1.10.3.3,PRODUCT:Laccase-3,CC_functional_completeness:modules,CC_gene:LAC3,CC_gene:LAC12,CC_gene:LAC5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028501001~ Laccase-3~ LAC3~ modules;original_location=complement(join(2673957..2674103%2C2673514..2673670%2C2673286..2673404%2C2673115..2673189%2C2671734..2671827%2C2671532..2671650%2C2670948..2671018%2C2670234..2670375%2C2669930..2670105%2C2669383..2669582%2C2668060..2668190%2C2667814..2667890%2C2666777..2666851%2C2666406..2666598%2C2665346..2665465%2C2665096..2665234%2C2664890..2664930%2C2664359..2664613%2C2663034..2663668%2C2660887..2660989%2C2660620..2660771%2C2660287..2660531%2C2660051..2660182%2C2659017..2659958%2C2658793..2658926));owner=coffea | |
| 19860 chr1 manual_curation exon 32846332 32846465 . - . Parent=GSCOCT00028501001 | |
| 19861 chr1 manual_curation exon 32846556 32847497 . - . Parent=GSCOCT00028501001 | |
| 19862 chr1 manual_curation exon 32847590 32847721 . - . Parent=GSCOCT00028501001 | |
| 19863 chr1 manual_curation exon 32847826 32848070 . - . Parent=GSCOCT00028501001 | |
| 19864 chr1 manual_curation exon 32848159 32848310 . - . Parent=GSCOCT00028501001 | |
| 19865 chr1 manual_curation exon 32848426 32848528 . - . Parent=GSCOCT00028501001 | |
| 19866 chr1 manual_curation exon 32850573 32851207 . - . Parent=GSCOCT00028501001 | |
| 19867 chr1 manual_curation exon 32851898 32852152 . - . Parent=GSCOCT00028501001 | |
| 19868 chr1 manual_curation exon 32852429 32852469 . - . Parent=GSCOCT00028501001 | |
| 19869 chr1 manual_curation exon 32852635 32852773 . - . Parent=GSCOCT00028501001 | |
| 19870 chr1 manual_curation exon 32852885 32853004 . - . Parent=GSCOCT00028501001 | |
| 19871 chr1 manual_curation exon 32853945 32854137 . - . Parent=GSCOCT00028501001 | |
| 19872 chr1 manual_curation exon 32854316 32854390 . - . Parent=GSCOCT00028501001 | |
| 19873 chr1 manual_curation exon 32855353 32855429 . - . Parent=GSCOCT00028501001 | |
| 19874 chr1 manual_curation exon 32855599 32855729 . - . Parent=GSCOCT00028501001 | |
| 19875 chr1 manual_curation exon 32856922 32857121 . - . Parent=GSCOCT00028501001 | |
| 19876 chr1 manual_curation exon 32857469 32857644 . - . Parent=GSCOCT00028501001 | |
| 19877 chr1 manual_curation exon 32857773 32857914 . - . Parent=GSCOCT00028501001 | |
| 19878 chr1 manual_curation exon 32858487 32858557 . - . Parent=GSCOCT00028501001 | |
| 19879 chr1 manual_curation exon 32859071 32859189 . - . Parent=GSCOCT00028501001 | |
| 19880 chr1 manual_curation exon 32859273 32859366 . - . Parent=GSCOCT00028501001 | |
| 19881 chr1 manual_curation exon 32860654 32860728 . - . Parent=GSCOCT00028501001 | |
| 19882 chr1 manual_curation exon 32860825 32860943 . - . Parent=GSCOCT00028501001 | |
| 19883 chr1 manual_curation exon 32861053 32861209 . - . Parent=GSCOCT00028501001 | |
| 19884 chr1 manual_curation exon 32861496 32862058 . - . Parent=GSCOCT00028501001 | |
| 19885 chr1 manual_curation CDS 32846332 32846465 . - 1 Parent=GSCOCT00028501001 | |
| 19886 chr1 manual_curation CDS 32846556 32847497 . - 1 Parent=GSCOCT00028501001 | |
| 19887 chr1 manual_curation CDS 32847590 32847721 . - 1 Parent=GSCOCT00028501001 | |
| 19888 chr1 manual_curation CDS 32847826 32848070 . - 2 Parent=GSCOCT00028501001 | |
| 19889 chr1 manual_curation CDS 32848159 32848310 . - 0 Parent=GSCOCT00028501001 | |
| 19890 chr1 manual_curation CDS 32848426 32848528 . - 2 Parent=GSCOCT00028501001 | |
| 19891 chr1 manual_curation CDS 32850573 32851207 . - 0 Parent=GSCOCT00028501001 | |
| 19892 chr1 manual_curation CDS 32851898 32852152 . - 0 Parent=GSCOCT00028501001 | |
| 19893 chr1 manual_curation CDS 32852429 32852469 . - 1 Parent=GSCOCT00028501001 | |
| 19894 chr1 manual_curation CDS 32852635 32852773 . - 0 Parent=GSCOCT00028501001 | |
| 19895 chr1 manual_curation CDS 32852885 32853004 . - 0 Parent=GSCOCT00028501001 | |
| 19896 chr1 manual_curation CDS 32853945 32854137 . - 2 Parent=GSCOCT00028501001 | |
| 19897 chr1 manual_curation CDS 32854316 32854390 . - 2 Parent=GSCOCT00028501001 | |
| 19898 chr1 manual_curation CDS 32855353 32855429 . - 0 Parent=GSCOCT00028501001 | |
| 19899 chr1 manual_curation CDS 32855599 32855729 . - 1 Parent=GSCOCT00028501001 | |
| 19900 chr1 manual_curation CDS 32856922 32857121 . - 2 Parent=GSCOCT00028501001 | |
| 19901 chr1 manual_curation CDS 32857469 32857644 . - 0 Parent=GSCOCT00028501001 | |
| 19902 chr1 manual_curation CDS 32857773 32857914 . - 2 Parent=GSCOCT00028501001 | |
| 19903 chr1 manual_curation CDS 32858487 32858557 . - 0 Parent=GSCOCT00028501001 | |
| 19904 chr1 manual_curation CDS 32859071 32859189 . - 1 Parent=GSCOCT00028501001 | |
| 19905 chr1 manual_curation CDS 32859273 32859366 . - 0 Parent=GSCOCT00028501001 | |
| 19906 chr1 manual_curation CDS 32860654 32860728 . - 0 Parent=GSCOCT00028501001 | |
| 19907 chr1 manual_curation CDS 32860825 32860943 . - 1 Parent=GSCOCT00028501001 | |
| 19908 chr1 manual_curation CDS 32861053 32861209 . - 0 Parent=GSCOCT00028501001 | |
| 19909 chr1 manual_curation CDS 32861496 32861642 . - 0 Parent=GSCOCT00028501001 | |
| 19910 chr1 manual_curation gene 32866362 32872518 . + . ID=GSCOCG00028502001;Name=Cc01_g14860 | |
| 19911 chr1 manual_curation mRNA 32866362 32872518 . + . ID=GSCOCT00028502001;Parent=GSCOCG00028502001;Name=Cc01_g14860 | |
| 19912 chr1 manual_curation polypeptide 32866725 32871807 . + . ID=GSCOCP00028502001;Dbxref=GENE3D:G3DSA:3.30.1520.10,InterPro:IPR001683,InterPro:IPR015404,PFAM:PF00787,PFAM:PF09325,PROFILE:PS50195,SMART:SM00312,SUPERFAMILY:SSF64268,SwissProt:B9DFS6,SwissProt:Q8L5Z7,SwissProt:Q9FG38,TAIR:AT5G06140.1,TAIR:AT5G07120.1,TAIR:AT5G58440.1,TrEMBL:B9RRH9,TrEMBL:D7LZX8,TrEMBL:F6GUI4;Derives_from=GSCOCT00028502001;Name=Cc01_g14860;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0007154,GO:0035091,CC_EC_number:missing_EC_number,PRODUCT:Sorting nexin 2B,CC_functional_completeness:complete,CC_gene:SNX2B,CC_gene:SNX2A,CC_gene:SNX1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028502001~ Sorting nexin 2B~ SNX2B~ complete;original_location=join(2679186..2679232%2C2679299..2680307%2C2680908..2681117%2C2681202..2681462%2C2683101..2683187%2C2684188..2684268);owner=coffea | |
| 19913 chr1 manual_curation exon 32866362 32866771 . + . Parent=GSCOCT00028502001 | |
| 19914 chr1 manual_curation exon 32866838 32867846 . + . Parent=GSCOCT00028502001 | |
| 19915 chr1 manual_curation exon 32868447 32868656 . + . Parent=GSCOCT00028502001 | |
| 19916 chr1 manual_curation exon 32868741 32869001 . + . Parent=GSCOCT00028502001 | |
| 19917 chr1 manual_curation exon 32870640 32870726 . + . Parent=GSCOCT00028502001 | |
| 19918 chr1 manual_curation exon 32871727 32872518 . + . Parent=GSCOCT00028502001 | |
| 19919 chr1 manual_curation CDS 32866725 32866771 . + 0 Parent=GSCOCT00028502001 | |
| 19920 chr1 manual_curation CDS 32866838 32867846 . + 2 Parent=GSCOCT00028502001 | |
| 19921 chr1 manual_curation CDS 32868447 32868656 . + 0 Parent=GSCOCT00028502001 | |
| 19922 chr1 manual_curation CDS 32868741 32869001 . + 0 Parent=GSCOCT00028502001 | |
| 19923 chr1 manual_curation CDS 32870640 32870726 . + 0 Parent=GSCOCT00028502001 | |
| 19924 chr1 manual_curation CDS 32871727 32871807 . + 0 Parent=GSCOCT00028502001 | |
| 19925 chr1 manual_curation gene 32874157 32874801 . - . ID=GSCOCG00028506001;Name=Cc01_g14870 | |
| 19926 chr1 manual_curation mRNA 32874157 32874801 . - . ID=GSCOCT00028506001;Parent=GSCOCG00028506001;Name=Cc01_g14870 | |
| 19927 chr1 manual_curation polypeptide 32874157 32874801 . - . ID=GSCOCP00028506001;Dbxref=InterPro:IPR004895,PFAM:PF03208,SwissProt:O80915,SwissProt:Q9FLB6,SwissProt:Q9LYN0,TAIR:AT2G38360.1,TAIR:AT3G56110.1,TAIR:AT5G05380.1,TrEMBL:B9HSI3,TrEMBL:B9INR8,TrEMBL:D7LLJ1;Derives_from=GSCOCT00028506001;Name=Cc01_g14870;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:PRA1 family protein B4,CC_functional_completeness:complete,CC_gene:PRA1B4,CC_gene:PRA1B3,CC_gene:PRA1B1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028506001~ PRA1 family protein B4~ PRA1B4~ complete;original_location=complement(2686618..2687262);owner=coffea | |
| 19928 chr1 manual_curation exon 32874157 32874801 . - . Parent=GSCOCT00028506001 | |
| 19929 chr1 manual_curation CDS 32874157 32874801 . - 0 Parent=GSCOCT00028506001 | |
| 19930 chr1 manual_curation gene 32877453 32880890 . + . ID=GSCOCG00028507001;Name=Cc01_g14880 | |
| 19931 chr1 manual_curation mRNA 32877453 32880890 . + . ID=GSCOCT00028507001;Parent=GSCOCG00028507001;Name=Cc01_g14880 | |
| 19932 chr1 manual_curation polypeptide 32877897 32879810 . + . ID=GSCOCP00028507001;Dbxref=InterPro:IPR004140,PANTHER:PTHR12542,PFAM:PF03081,SwissProt:O35250,SwissProt:O54922,SwissProt:Q9UPT5,TAIR:AT1G07000.1,TAIR:AT5G50380.1,TAIR:AT5G58430.1,TrEMBL:A5B8C4,TrEMBL:G8Z258,TrEMBL:Q40156;Derives_from=GSCOCT00028507001;Name=Cc01_g14880;Ontology_term=CC_evidence_code:ISS,GO:0000145,GO:0006887,CC_EC_number:missing_EC_number,PRODUCT:exocyst subunit exo70 family protein B1,CC_functional_completeness:complete,CC_gene:Exoc7,CC_gene:EXOC7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028507001~ exocyst subunit exo70 family protein B1~ Exoc7~ complete;original_location=2690358..2692271;owner=coffea | |
| 19933 chr1 manual_curation exon 32877453 32880890 . + . Parent=GSCOCT00028507001 | |
| 19934 chr1 manual_curation CDS 32877897 32879810 . + 0 Parent=GSCOCT00028507001 | |
| 19935 chr1 manual_curation gene 32881526 32885498 . - . ID=GSCOCG00028508001;Name=Cc01_g14890 | |
| 19936 chr1 manual_curation mRNA 32881526 32885498 . - . ID=GSCOCT00028508001;Parent=GSCOCG00028508001;Name=Cc01_g14890 | |
| 19937 chr1 manual_curation polypeptide 32881823 32885498 . - . ID=GSCOCP00028508001;Dbxref=InterPro:IPR001087,InterPro:IPR013830,PFAM:PF00657,SUPERFAMILY:SSF52266,SwissProt:O22927,SwissProt:Q9LMJ3,SwissProt:Q9SJA9,TAIR:AT1G06990.1,TAIR:AT2G24560.1,TAIR:AT2G30310.1,TrEMBL:D7KT80,TrEMBL:D7TEG1,TrEMBL:E6NTZ1;Derives_from=GSCOCT00028508001;Name=Cc01_g14890;Ontology_term=CC_evidence_code:ISS,GO:0006629,CC_EC_number:missing_EC_number,PRODUCT:GDSL esterase/lipase At2g30310,CC_functional_completeness:complete,CC_gene:At2g30310,CC_gene:At2g24560,CC_gene:At1g06990;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028508001~ GDSL esterase/lipase At2g30310~ At2g30310~ complete;original_location=complement(join(2697351..2697959%2C2696871..2697126%2C2696567..2696624%2C2695145..2695724%2C2694595..2694850%2C2694284..2694492));owner=coffea | |
| 19938 chr1 manual_curation exon 32881526 32882031 . - . Parent=GSCOCT00028508001 | |
| 19939 chr1 manual_curation exon 32882134 32882389 . - . Parent=GSCOCT00028508001 | |
| 19940 chr1 manual_curation exon 32882684 32883263 . - . Parent=GSCOCT00028508001 | |
| 19941 chr1 manual_curation exon 32884106 32884163 . - . Parent=GSCOCT00028508001 | |
| 19942 chr1 manual_curation exon 32884410 32884665 . - . Parent=GSCOCT00028508001 | |
| 19943 chr1 manual_curation exon 32884890 32885498 . - . Parent=GSCOCT00028508001 | |
| 19944 chr1 manual_curation CDS 32881823 32882031 . - 1 Parent=GSCOCT00028508001 | |
| 19945 chr1 manual_curation CDS 32882134 32882389 . - 0 Parent=GSCOCT00028508001 | |
| 19946 chr1 manual_curation CDS 32882684 32883263 . - 2 Parent=GSCOCT00028508001 | |
| 19947 chr1 manual_curation CDS 32884106 32884163 . - 1 Parent=GSCOCT00028508001 | |
| 19948 chr1 manual_curation CDS 32884410 32884665 . - 0 Parent=GSCOCT00028508001 | |
| 19949 chr1 manual_curation CDS 32884890 32885498 . - 0 Parent=GSCOCT00028508001 | |
| 19950 chr1 manual_curation gene 32896252 32900468 . - . ID=GSCOCG00028511001;Name=Cc01_g14900 | |
| 19951 chr1 manual_curation mRNA 32896252 32900468 . - . ID=GSCOCT00028511001;Parent=GSCOCG00028511001;Name=Cc01_g14900 | |
| 19952 chr1 manual_curation polypeptide 32896252 32900468 . - . ID=GSCOCP00028511001;Dbxref=InterPro:IPR006153,PFAM:PF00999,SwissProt:O22920,SwissProt:Q9LMJ1,SwissProt:Q9SIT5,TAIR:AT1G06970.1,TAIR:AT2G13620.1,TAIR:AT2G30240.1,TrEMBL:B9RIX8,TrEMBL:D7KGX3,TrEMBL:F6GUI0;Derives_from=GSCOCT00028511001;Name=Cc01_g14900;Ontology_term=CC_evidence_code:ISS,GO:0006812,GO:0015299,GO:0016021,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Putative Cation/H( ) antiporter 14,CC_functional_completeness:complete,CC_gene:CHX14,CC_gene:CHX13,CC_gene:CHX15;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028511001~ Putative Cation/H( ) antiporter 14~ CHX14~ complete;original_location=complement(join(2712687..2712929%2C2711083..2712084%2C2708713..2709900));owner=coffea | |
| 19953 chr1 manual_curation exon 32896252 32897439 . - . Parent=GSCOCT00028511001 | |
| 19954 chr1 manual_curation exon 32898622 32899623 . - . Parent=GSCOCT00028511001 | |
| 19955 chr1 manual_curation exon 32900226 32900468 . - . Parent=GSCOCT00028511001 | |
| 19956 chr1 manual_curation CDS 32896252 32897439 . - 0 Parent=GSCOCT00028511001 | |
| 19957 chr1 manual_curation CDS 32898622 32899623 . - 0 Parent=GSCOCT00028511001 | |
| 19958 chr1 manual_curation CDS 32900226 32900468 . - 0 Parent=GSCOCT00028511001 | |
| 19959 chr1 manual_curation gene 32901209 32909879 . - . ID=GSCOCG00028512001;Name=Cc01_g14910 | |
| 19960 chr1 manual_curation mRNA 32901209 32909879 . - . ID=GSCOCT00028512001;Parent=GSCOCG00028512001;Name=Cc01_g14910 | |
| 19961 chr1 manual_curation polypeptide 32901689 32909879 . - . ID=GSCOCP00028512001;Dbxref=InterPro:IPR006153,InterPro:IPR013216,PFAM:PF00999,PFAM:PF08241,SwissProt:O22920,SwissProt:Q9LMJ1,SwissProt:Q9SIT5,TAIR:AT1G06970.1,TAIR:AT2G13620.1,TAIR:AT5G01710.1,TrEMBL:B9S279,TrEMBL:G7IWX1,TrEMBL:I1MZU5;Derives_from=GSCOCT00028512001;Name=Cc01_g14910;Ontology_term=CC_evidence_code:ISS,GO:0006812,GO:0008152,GO:0008168,GO:0015299,GO:0016021,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Putative Cation/H( ) antiporter 15,CC_functional_completeness:modules,CC_gene:CHX15,CC_gene:CHX14,CC_gene:CHX13;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028512001~ Putative Cation/H( ) antiporter 15~ CHX15~ modules;original_location=complement(join(2720956..2722340%2C2716933..2717185%2C2715523..2716527%2C2714150..2715310));owner=coffea | |
| 19962 chr1 manual_curation exon 32901209 32902849 . - . Parent=GSCOCT00028512001 | |
| 19963 chr1 manual_curation exon 32903062 32904066 . - . Parent=GSCOCT00028512001 | |
| 19964 chr1 manual_curation exon 32904472 32904724 . - . Parent=GSCOCT00028512001 | |
| 19965 chr1 manual_curation exon 32908495 32909879 . - . Parent=GSCOCT00028512001 | |
| 19966 chr1 manual_curation CDS 32901689 32902849 . - 0 Parent=GSCOCT00028512001 | |
| 19967 chr1 manual_curation CDS 32903062 32904066 . - 0 Parent=GSCOCT00028512001 | |
| 19968 chr1 manual_curation CDS 32904472 32904724 . - 2 Parent=GSCOCT00028512001 | |
| 19969 chr1 manual_curation CDS 32908495 32909879 . - 0 Parent=GSCOCT00028512001 | |
| 19970 chr1 manual_curation gene 32912453 32913903 . + . ID=GSCOCG00028513001;Name=Cc01_g14920 | |
| 19971 chr1 manual_curation mRNA 32912453 32913903 . + . ID=GSCOCT00028513001;Parent=GSCOCG00028513001;Name=Cc01_g14920 | |
| 19972 chr1 manual_curation polypeptide 32912453 32913903 . + . ID=GSCOCP00028513001;Dbxref=SwissProt:O24303,SwissProt:Q8LPR9,TAIR:AT1G06950.1,TrEMBL:A5B1M8,TrEMBL:D7KG84,TrEMBL:D7SJM2;Derives_from=GSCOCT00028513001;Name=Cc01_g14920;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein TIC110%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:TIC110;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028513001~ Protein TIC110%2C chloroplastic~ TIC110~ fragment;original_location=join(2724914..2725458%2C2726301..2726364);owner=coffea | |
| 19973 chr1 manual_curation exon 32912453 32912997 . + . Parent=GSCOCT00028513001 | |
| 19974 chr1 manual_curation exon 32913840 32913903 . + . Parent=GSCOCT00028513001 | |
| 19975 chr1 manual_curation CDS 32912453 32912997 . + 0 Parent=GSCOCT00028513001 | |
| 19976 chr1 manual_curation CDS 32913840 32913903 . + 2 Parent=GSCOCT00028513001 | |
| 19977 chr1 manual_curation gene 32913966 32919789 . + . ID=GSCOCG00028514001;Name=Cc01_g14930 | |
| 19978 chr1 manual_curation mRNA 32913966 32919789 . + . ID=GSCOCT00028514001;Parent=GSCOCG00028514001;Name=Cc01_g14930 | |
| 19979 chr1 manual_curation polypeptide 32913966 32919789 . + . ID=GSCOCP00028514001;Dbxref=SwissProt:O24303,SwissProt:Q8LPR9,TAIR:AT1G06950.1,TrEMBL:B9INP5,TrEMBL:D7SJM2,TrEMBL:I1JHJ8;Derives_from=GSCOCT00028514001;Name=Cc01_g14930;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein TIC110%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:TIC110;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00028514001~ Protein TIC110%2C chloroplastic~ TIC110~ fragment;original_location=join(2726427..2726741%2C2726861..2726929%2C2727034..2727132%2C2727333..2727399%2C2728149..2728213%2C2728338..2728432%2C2728745..2728869%2C2729047..2729147%2C2730146..2730362%2C2730597..2730751%2C2731283..2731408%2C2731552..2732250);owner=coffea | |
| 19980 chr1 manual_curation exon 32913966 32914280 . + . Parent=GSCOCT00028514001 | |
| 19981 chr1 manual_curation exon 32914400 32914468 . + . Parent=GSCOCT00028514001 | |
| 19982 chr1 manual_curation exon 32914573 32914671 . + . Parent=GSCOCT00028514001 | |
| 19983 chr1 manual_curation exon 32914872 32914938 . + . Parent=GSCOCT00028514001 | |
| 19984 chr1 manual_curation exon 32915688 32915752 . + . Parent=GSCOCT00028514001 | |
| 19985 chr1 manual_curation exon 32915877 32915971 . + . Parent=GSCOCT00028514001 | |
| 19986 chr1 manual_curation exon 32916284 32916408 . + . Parent=GSCOCT00028514001 | |
| 19987 chr1 manual_curation exon 32916586 32916686 . + . Parent=GSCOCT00028514001 | |
| 19988 chr1 manual_curation exon 32917685 32917901 . + . Parent=GSCOCT00028514001 | |
| 19989 chr1 manual_curation exon 32918136 32918290 . + . Parent=GSCOCT00028514001 | |
| 19990 chr1 manual_curation exon 32918822 32918947 . + . Parent=GSCOCT00028514001 | |
| 19991 chr1 manual_curation exon 32919091 32919789 . + . Parent=GSCOCT00028514001 | |
| 19992 chr1 manual_curation CDS 32913966 32914280 . + 0 Parent=GSCOCT00028514001 | |
| 19993 chr1 manual_curation CDS 32914400 32914468 . + 0 Parent=GSCOCT00028514001 | |
| 19994 chr1 manual_curation CDS 32914573 32914671 . + 0 Parent=GSCOCT00028514001 | |
| 19995 chr1 manual_curation CDS 32914872 32914938 . + 0 Parent=GSCOCT00028514001 | |
| 19996 chr1 manual_curation CDS 32915688 32915752 . + 1 Parent=GSCOCT00028514001 | |
| 19997 chr1 manual_curation CDS 32915877 32915971 . + 0 Parent=GSCOCT00028514001 | |
| 19998 chr1 manual_curation CDS 32916284 32916408 . + 2 Parent=GSCOCT00028514001 | |
| 19999 chr1 manual_curation CDS 32916586 32916686 . + 1 Parent=GSCOCT00028514001 | |
| 20000 chr1 manual_curation CDS 32917685 32917901 . + 0 Parent=GSCOCT00028514001 | |
| 20001 chr1 manual_curation CDS 32918136 32918290 . + 1 Parent=GSCOCT00028514001 | |
| 20002 chr1 manual_curation CDS 32918822 32918947 . + 0 Parent=GSCOCT00028514001 | |
| 20003 chr1 manual_curation CDS 32919091 32919789 . + 0 Parent=GSCOCT00028514001 | |
| 20004 chr1 manual_curation gene 32945437 32946005 . + . ID=GSCOCG00016623001;Name=Cc01_g14940 | |
| 20005 chr1 manual_curation mRNA 32945437 32946005 . + . ID=GSCOCT00016623001;Parent=GSCOCG00016623001;Name=Cc01_g14940 | |
| 20006 chr1 manual_curation polypeptide 32945437 32946005 . + . ID=GSCOCP00016623001;Dbxref=SwissProt:O24303,SwissProt:Q8LPR9,TAIR:AT1G06950.1,TrEMBL:B9I6V1,TrEMBL:B9RVF9,TrEMBL:D7SJM2;Derives_from=GSCOCT00016623001;Name=Cc01_g14940;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein TIC110%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:TIC110;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016623001~ Protein TIC110%2C chloroplastic~ TIC110~ fragment;original_location=complement(join(4305533..4305754%2C4305186..4305437));owner=coffea | |
| 20007 chr1 manual_curation exon 32945754 32946005 . + . Parent=GSCOCT00016623001 | |
| 20008 chr1 manual_curation exon 32945437 32945658 . + . Parent=GSCOCT00016623001 | |
| 20009 chr1 manual_curation CDS 32945754 32946005 . + 0 Parent=GSCOCT00016623001 | |
| 20010 chr1 manual_curation CDS 32945437 32945658 . + 0 Parent=GSCOCT00016623001 | |
| 20011 chr1 manual_curation gene 32955392 32958564 . - . ID=GSCOCG00016622001;Name=Cc01_g14950 | |
| 20012 chr1 manual_curation mRNA 32955392 32958564 . - . ID=GSCOCT00016622001;Parent=GSCOCG00016622001;Name=Cc01_g14950 | |
| 20013 chr1 manual_curation polypeptide 32955739 32958317 . - . ID=GSCOCP00016622001;Dbxref=InterPro:IPR003657,PFAM:PF03106,PROFILE:PS50811,SMART:SM00774,SwissProt:Q8S8P5,SwissProt:Q93WV0,SwissProt:Q9ZQ70,TAIR:AT2G03340.1,TAIR:AT2G38470.1,TAIR:AT4G26640.2,TrEMBL:A3QR50,TrEMBL:B2G284,TrEMBL:F6GUH8;Derives_from=GSCOCT00016622001;Name=Cc01_g14950;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0043565,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable WRKY transcription factor 3,CC_functional_completeness:complete,CC_gene:WRKY33,CC_gene:WRKY20,CC_gene:WRKY3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016622001~ Putative Probable WRKY transcription factor 3~ WRKY33~ complete;original_location=join(4292874..4293137%2C4293389..4293556%2C4293656..4294275%2C4294383..4294544%2C4295029..4295452);owner=coffea | |
| 20014 chr1 manual_curation exon 32958054 32958564 . - . Parent=GSCOCT00016622001 | |
| 20015 chr1 manual_curation exon 32957635 32957802 . - . Parent=GSCOCT00016622001 | |
| 20016 chr1 manual_curation exon 32956916 32957535 . - . Parent=GSCOCT00016622001 | |
| 20017 chr1 manual_curation exon 32956647 32956808 . - . Parent=GSCOCT00016622001 | |
| 20018 chr1 manual_curation exon 32955392 32956162 . - . Parent=GSCOCT00016622001 | |
| 20019 chr1 manual_curation CDS 32958054 32958317 . - 0 Parent=GSCOCT00016622001 | |
| 20020 chr1 manual_curation CDS 32957635 32957802 . - 0 Parent=GSCOCT00016622001 | |
| 20021 chr1 manual_curation CDS 32956916 32957535 . - 0 Parent=GSCOCT00016622001 | |
| 20022 chr1 manual_curation CDS 32956647 32956808 . - 2 Parent=GSCOCT00016622001 | |
| 20023 chr1 manual_curation CDS 32955739 32956162 . - 2 Parent=GSCOCT00016622001 | |
| 20024 chr1 manual_curation gene 32960739 32966031 . - . ID=GSCOCG00016621001;Name=Cc01_g14960 | |
| 20025 chr1 manual_curation mRNA 32960739 32966031 . - . ID=GSCOCT00016621001;Parent=GSCOCG00016621001;Name=Cc01_g14960 | |
| 20026 chr1 manual_curation polypeptide 32961380 32966031 . - . ID=GSCOCP00016621001;Dbxref=InterPro:IPR006553,SMART:SM00367,SwissProt:P34284,SwissProt:Q8RWU5,SwissProt:Q9C5D2,TAIR:AT4G15475.1,TAIR:AT5G01720.1,TAIR:AT5G27920.1,TrEMBL:B9INS4,TrEMBL:B9SL32,TrEMBL:F6GUH6;Derives_from=GSCOCT00016621001;Name=Cc01_g14960;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:F-box/LRR-repeat protein 3,CC_functional_completeness:complete,CC_gene:FBL3,CC_gene:FBL4,CC_gene:C02F5.7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016621001~ F-box/LRR-repeat protein 3~ FBL3~ complete;original_location=join(4285160..4285538%2C4285572..4285801%2C4286494..4286619%2C4286697..4286822%2C4286899..4287292%2C4287371..4287500%2C4288313..4288607%2C4288694..4288945%2C4289776..4289811);owner=coffea | |
| 20027 chr1 manual_curation exon 32965653 32966031 . - . Parent=GSCOCT00016621001 | |
| 20028 chr1 manual_curation exon 32965390 32965619 . - . Parent=GSCOCT00016621001 | |
| 20029 chr1 manual_curation exon 32964572 32964697 . - . Parent=GSCOCT00016621001 | |
| 20030 chr1 manual_curation exon 32964369 32964494 . - . Parent=GSCOCT00016621001 | |
| 20031 chr1 manual_curation exon 32963899 32964292 . - . Parent=GSCOCT00016621001 | |
| 20032 chr1 manual_curation exon 32963691 32963820 . - . Parent=GSCOCT00016621001 | |
| 20033 chr1 manual_curation exon 32962584 32962878 . - . Parent=GSCOCT00016621001 | |
| 20034 chr1 manual_curation exon 32962246 32962497 . - . Parent=GSCOCT00016621001 | |
| 20035 chr1 manual_curation exon 32960739 32961415 . - . Parent=GSCOCT00016621001 | |
| 20036 chr1 manual_curation CDS 32965653 32966031 . - 0 Parent=GSCOCT00016621001 | |
| 20037 chr1 manual_curation CDS 32965390 32965619 . - 1 Parent=GSCOCT00016621001 | |
| 20038 chr1 manual_curation CDS 32964572 32964697 . - 0 Parent=GSCOCT00016621001 | |
| 20039 chr1 manual_curation CDS 32964369 32964494 . - 0 Parent=GSCOCT00016621001 | |
| 20040 chr1 manual_curation CDS 32963899 32964292 . - 0 Parent=GSCOCT00016621001 | |
| 20041 chr1 manual_curation CDS 32963691 32963820 . - 1 Parent=GSCOCT00016621001 | |
| 20042 chr1 manual_curation CDS 32962584 32962878 . - 2 Parent=GSCOCT00016621001 | |
| 20043 chr1 manual_curation CDS 32962246 32962497 . - 0 Parent=GSCOCT00016621001 | |
| 20044 chr1 manual_curation CDS 32961380 32961415 . - 0 Parent=GSCOCT00016621001 | |
| 20045 chr1 manual_curation gene 32967277 32969614 . - . ID=GSCOCG00016620001;Name=Cc01_g14970 | |
| 20046 chr1 manual_curation mRNA 32967277 32969614 . - . ID=GSCOCT00016620001;Parent=GSCOCG00016620001;Name=Cc01_g14970 | |
| 20047 chr1 manual_curation polypeptide 32967465 32969472 . - . ID=GSCOCP00016620001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR012677,PFAM:PF00076,PROFILE:PS50102,SMART:SM00360,SwissProt:B8AM21,SwissProt:O22922,SwissProt:Q8H1S6,TAIR:AT1G06960.1,TAIR:AT2G30260.1,TAIR:AT2G47580.1,TrEMBL:B9INS5,TrEMBL:D7SJN7,TrEMBL:Q41499;Derives_from=GSCOCT00016620001;Name=Cc01_g14970;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,CC_EC_number:missing_EC_number,PRODUCT:U2 small nuclear ribonucleoprotein B'',CC_functional_completeness:fragment,CC_gene:U2B'',CC_gene:At1g06960,CC_gene:OsI_11177;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016620001~ U2 small nuclear ribonucleoprotein B''~ U2B''~ fragment;original_location=join(4281719..4281751%2C4282076..4282160%2C4282656..4282738%2C4283445..4283726);owner=coffea | |
| 20048 chr1 manual_curation exon 32969440 32969614 . - . Parent=GSCOCT00016620001 | |
| 20049 chr1 manual_curation exon 32969031 32969115 . - . Parent=GSCOCT00016620001 | |
| 20050 chr1 manual_curation exon 32968453 32968535 . - . Parent=GSCOCT00016620001 | |
| 20051 chr1 manual_curation exon 32967277 32967746 . - . Parent=GSCOCT00016620001 | |
| 20052 chr1 manual_curation CDS 32969440 32969472 . - 0 Parent=GSCOCT00016620001 | |
| 20053 chr1 manual_curation CDS 32969031 32969115 . - 0 Parent=GSCOCT00016620001 | |
| 20054 chr1 manual_curation CDS 32968453 32968535 . - 1 Parent=GSCOCT00016620001 | |
| 20055 chr1 manual_curation CDS 32967465 32967746 . - 0 Parent=GSCOCT00016620001 | |
| 20056 chr1 manual_curation gene 32983112 32983459 . - . ID=GSCOCG00016619001;Name=Cc01_g14980 | |
| 20057 chr1 manual_curation mRNA 32983112 32983459 . - . ID=GSCOCT00016619001;Parent=GSCOCG00016619001;Name=Cc01_g14980 | |
| 20058 chr1 manual_curation polypeptide 32983112 32983459 . - . ID=GSCOCP00016619001;Dbxref=InterPro:IPR009798,PFAM:PF07107,SwissProt:P20144,TAIR:AT3G10985.1,TrEMBL:B9HHX0,TrEMBL:F6GUH4,TrEMBL:Q9XES3;Derives_from=GSCOCT00016619001;Name=Cc01_g14980;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Wound-induced protein 1,CC_functional_completeness:complete,CC_gene:WUN1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016619001~ Putative Wound-induced protein 1~ WUN1~ complete;original_location=4267732..4268079;owner=coffea | |
| 20059 chr1 manual_curation exon 32983112 32983459 . - . Parent=GSCOCT00016619001 | |
| 20060 chr1 manual_curation CDS 32983112 32983459 . - 0 Parent=GSCOCT00016619001 | |
| 20061 chr1 manual_curation gene 32986369 32990158 . + . ID=GSCOCG00016618001;Name=Cc01_g14990 | |
| 20062 chr1 manual_curation mRNA 32986369 32990158 . + . ID=GSCOCT00016618001;Parent=GSCOCG00016618001;Name=Cc01_g14990 | |
| 20063 chr1 manual_curation polypeptide 32986447 32989706 . + . ID=GSCOCP00016618001;Dbxref=InterPro:IPR019368,PFAM:PF10236,SwissProt:P51398,TAIR:AT1G16870.1,TrEMBL:B9T6D9,TrEMBL:D7SJN5,TrEMBL:I1LLT9;Derives_from=GSCOCT00016618001;Name=Cc01_g14990;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:mitochondrial 28S ribosomal protein S29-related,CC_functional_completeness:complete,CC_gene:DAP3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016618001~ mitochondrial 28S ribosomal protein S29-related~ DAP3~ complete;original_location=complement(join(4264353..4264744%2C4264077..4264240%2C4263550..4263761%2C4263071..4263325%2C4262855..4262941%2C4262163..4262338%2C4261485..4261596));owner=coffea | |
| 20064 chr1 manual_curation exon 32989595 32990158 . + . Parent=GSCOCT00016618001 | |
| 20065 chr1 manual_curation exon 32988853 32989028 . + . Parent=GSCOCT00016618001 | |
| 20066 chr1 manual_curation exon 32988250 32988336 . + . Parent=GSCOCT00016618001 | |
| 20067 chr1 manual_curation exon 32987866 32988120 . + . Parent=GSCOCT00016618001 | |
| 20068 chr1 manual_curation exon 32987430 32987641 . + . Parent=GSCOCT00016618001 | |
| 20069 chr1 manual_curation exon 32986951 32987114 . + . Parent=GSCOCT00016618001 | |
| 20070 chr1 manual_curation exon 32986369 32986838 . + . Parent=GSCOCT00016618001 | |
| 20071 chr1 manual_curation CDS 32989595 32989706 . + 2 Parent=GSCOCT00016618001 | |
| 20072 chr1 manual_curation CDS 32988853 32989028 . + 0 Parent=GSCOCT00016618001 | |
| 20073 chr1 manual_curation CDS 32988250 32988336 . + 0 Parent=GSCOCT00016618001 | |
| 20074 chr1 manual_curation CDS 32987866 32988120 . + 0 Parent=GSCOCT00016618001 | |
| 20075 chr1 manual_curation CDS 32987430 32987641 . + 1 Parent=GSCOCT00016618001 | |
| 20076 chr1 manual_curation CDS 32986951 32987114 . + 2 Parent=GSCOCT00016618001 | |
| 20077 chr1 manual_curation CDS 32986447 32986838 . + 0 Parent=GSCOCT00016618001 | |
| 20078 chr1 manual_curation gene 32990843 33006178 . - . ID=GSCOCG00016617001;Name=Cc01_g15000 | |
| 20079 chr1 manual_curation mRNA 32990843 33006178 . - . ID=GSCOCT00016617001;Parent=GSCOCG00016617001;Name=Cc01_g15000 | |
| 20080 chr1 manual_curation polypeptide 32991618 33006178 . - . ID=GSCOCP00016617001;Dbxref=InterPro:IPR001841,InterPro:IPR011016,InterPro:IPR016024,InterPro:IPR018957,PFAM:PF00097,PROFILE:PS50089,SMART:SM00184,SMART:SM00744,SUPERFAMILY:SSF48371,SwissProt:A0JM49,SwissProt:E1C231,SwissProt:Q9FGI1,TAIR:AT5G58410.1,TrEMBL:B9RVH4,TrEMBL:D7MQD1,TrEMBL:G7KFI6;Derives_from=GSCOCT00016617001;Name=Cc01_g15000;Ontology_term=CC_evidence_code:ISS,GO:0005488,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative E3 ubiquitin-protein ligase listerin,CC_functional_completeness:complete,CC_gene:At5g58410,CC_gene:ltn1,CC_gene:LTN1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016617001~ Putative E3 ubiquitin-protein ligase listerin~ At5g58410~ complete;original_location=join(4245013..4245068%2C4245157..4245268%2C4245625..4245687%2C4245804..4245881%2C4246476..4246567%2C4247525..4247627%2C4248113..4248265%2C4249250..4249908%2C4250065..4250545%2C4251082..4251539%2C4252727..4253459%2C4255210..4255921%2C4256488..4257530%2C4257736..4258188%2C4258773..4259003%2C4259346..4259573);owner=coffea | |
| 20081 chr1 manual_curation exon 33006123 33006178 . - . Parent=GSCOCT00016617001 | |
| 20082 chr1 manual_curation exon 33005923 33006034 . - . Parent=GSCOCT00016617001 | |
| 20083 chr1 manual_curation exon 33005504 33005566 . - . Parent=GSCOCT00016617001 | |
| 20084 chr1 manual_curation exon 33005310 33005387 . - . Parent=GSCOCT00016617001 | |
| 20085 chr1 manual_curation exon 33004624 33004715 . - . Parent=GSCOCT00016617001 | |
| 20086 chr1 manual_curation exon 33003564 33003666 . - . Parent=GSCOCT00016617001 | |
| 20087 chr1 manual_curation exon 33002926 33003078 . - . Parent=GSCOCT00016617001 | |
| 20088 chr1 manual_curation exon 33001283 33001941 . - . Parent=GSCOCT00016617001 | |
| 20089 chr1 manual_curation exon 33000646 33001126 . - . Parent=GSCOCT00016617001 | |
| 20090 chr1 manual_curation exon 32999652 33000109 . - . Parent=GSCOCT00016617001 | |
| 20091 chr1 manual_curation exon 32997732 32998464 . - . Parent=GSCOCT00016617001 | |
| 20092 chr1 manual_curation exon 32995270 32995981 . - . Parent=GSCOCT00016617001 | |
| 20093 chr1 manual_curation exon 32993661 32994703 . - . Parent=GSCOCT00016617001 | |
| 20094 chr1 manual_curation exon 32993003 32993455 . - . Parent=GSCOCT00016617001 | |
| 20095 chr1 manual_curation exon 32992188 32992418 . - . Parent=GSCOCT00016617001 | |
| 20096 chr1 manual_curation exon 32990843 32991845 . - . Parent=GSCOCT00016617001 | |
| 20097 chr1 manual_curation CDS 33006123 33006178 . - 0 Parent=GSCOCT00016617001 | |
| 20098 chr1 manual_curation CDS 33005923 33006034 . - 2 Parent=GSCOCT00016617001 | |
| 20099 chr1 manual_curation CDS 33005504 33005566 . - 0 Parent=GSCOCT00016617001 | |
| 20100 chr1 manual_curation CDS 33005310 33005387 . - 0 Parent=GSCOCT00016617001 | |
| 20101 chr1 manual_curation CDS 33004624 33004715 . - 0 Parent=GSCOCT00016617001 | |
| 20102 chr1 manual_curation CDS 33003564 33003666 . - 2 Parent=GSCOCT00016617001 | |
| 20103 chr1 manual_curation CDS 33002926 33003078 . - 0 Parent=GSCOCT00016617001 | |
| 20104 chr1 manual_curation CDS 33001283 33001941 . - 0 Parent=GSCOCT00016617001 | |
| 20105 chr1 manual_curation CDS 33000646 33001126 . - 2 Parent=GSCOCT00016617001 | |
| 20106 chr1 manual_curation CDS 32999652 33000109 . - 0 Parent=GSCOCT00016617001 | |
| 20107 chr1 manual_curation CDS 32997732 32998464 . - 2 Parent=GSCOCT00016617001 | |
| 20108 chr1 manual_curation CDS 32995270 32995981 . - 0 Parent=GSCOCT00016617001 | |
| 20109 chr1 manual_curation CDS 32993661 32994703 . - 1 Parent=GSCOCT00016617001 | |
| 20110 chr1 manual_curation CDS 32993003 32993455 . - 0 Parent=GSCOCT00016617001 | |
| 20111 chr1 manual_curation CDS 32992188 32992418 . - 0 Parent=GSCOCT00016617001 | |
| 20112 chr1 manual_curation CDS 32991618 32991845 . - 0 Parent=GSCOCT00016617001 | |
| 20113 chr1 manual_curation gene 33014111 33018295 . - . ID=GSCOCG00016615001;Name=Cc01_g15010 | |
| 20114 chr1 manual_curation mRNA 33014111 33018295 . - . ID=GSCOCT00016615001;Parent=GSCOCG00016615001;Name=Cc01_g15010 | |
| 20115 chr1 manual_curation polypeptide 33014329 33017242 . - . ID=GSCOCP00016615001;Dbxref=InterPro:IPR007612,PFAM:PF04525,SwissProt:Q8GWL2,SwissProt:Q9LZX1,TAIR:AT2G30270.1,TAIR:AT5G01750.2,TrEMBL:B9INQ1,TrEMBL:F6GUG8,TrEMBL:I1MBH7;Derives_from=GSCOCT00016615001;Name=Cc01_g15010;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein LURP-one-related 7,CC_functional_completeness:complete,CC_gene:At2g30270,CC_gene:At5g01750;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016615001~ Putative Protein LURP-one-related 7~ At2g30270~ complete;original_location=join(4233949..4234236%2C4235596..4235805%2C4236716..4236862);owner=coffea | |
| 20116 chr1 manual_curation exon 33016955 33018295 . - . Parent=GSCOCT00016615001 | |
| 20117 chr1 manual_curation exon 33015386 33015595 . - . Parent=GSCOCT00016615001 | |
| 20118 chr1 manual_curation exon 33014111 33014475 . - . Parent=GSCOCT00016615001 | |
| 20119 chr1 manual_curation CDS 33016955 33017242 . - 0 Parent=GSCOCT00016615001 | |
| 20120 chr1 manual_curation CDS 33015386 33015595 . - 0 Parent=GSCOCT00016615001 | |
| 20121 chr1 manual_curation CDS 33014329 33014475 . - 0 Parent=GSCOCT00016615001 | |
| 20122 chr1 manual_curation gene 33018382 33019791 . - . ID=GSCOCG00016614001;Name=Cc01_g15020 | |
| 20123 chr1 manual_curation mRNA 33018382 33019791 . - . ID=GSCOCT00016614001;Parent=GSCOCG00016614001;Name=Cc01_g15020 | |
| 20124 chr1 manual_curation polypeptide 33018382 33019791 . - . ID=GSCOCP00016614001;Dbxref=InterPro:IPR003480,PFAM:PF02458,SwissProt:Q8S9G6,SwissProt:Q9M6E2,SwissProt:Q9M6F0,TAIR:AT2G23510.1,TAIR:AT2G25150.1,TAIR:AT5G07080.1,TrEMBL:A5BYM0,TrEMBL:B9RVG9,TrEMBL:F6GUG6;Derives_from=GSCOCT00016614001;Name=Cc01_g15020;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.3.1.162,PRODUCT:Putative Taxadien-5-alpha-ol O-acetyltransferase,CC_functional_completeness:complete,CC_gene:TAT;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016614001~ Putative Taxadien-5-alpha-ol O-acetyltransferase~ TAT~ complete;original_location=4231400..4232809;owner=coffea | |
| 20125 chr1 manual_curation exon 33018382 33019791 . - . Parent=GSCOCT00016614001 | |
| 20126 chr1 manual_curation CDS 33018382 33019791 . - 0 Parent=GSCOCT00016614001 | |
| 20127 chr1 manual_curation gene 33021906 33025588 . - . ID=GSCOCG00016613001;Name=Cc01_g15030 | |
| 20128 chr1 manual_curation mRNA 33021906 33025588 . - . ID=GSCOCT00016613001;Parent=GSCOCG00016613001;Name=Cc01_g15030 | |
| 20129 chr1 manual_curation polypeptide 33022257 33025299 . - . ID=GSCOCP00016613001;Dbxref=GENE3D:G3DSA:3.40.640.10,InterPro:IPR005814,InterPro:IPR015421,InterPro:IPR015424,PANTHER:PTHR11986,PFAM:PF00202,PROSITE:PS00600,SUPERFAMILY:SSF53383,SwissProt:Q940M2,SwissProt:Q94AL9,SwissProt:Q9SR86,TAIR:AT2G38400.2,TAIR:AT3G08860.1,TAIR:AT4G39660.1,TrEMBL:B9SZ94,TrEMBL:F6GUG5,TrEMBL:F6GXY9;Derives_from=GSCOCT00016613001;Name=Cc01_g15030;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008483,GO:0030170,CC_EC_number:2.6.1.44,PRODUCT:Alanine--glyoxylate aminotransferase 2 homolog 3%2C mitochondrial,CC_functional_completeness:complete,CC_gene:At3g08860,CC_gene:AGT3,CC_gene:AGT2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016613001~ Alanine--glyoxylate aminotransferase 2 homolog 3%2C mitochondrial~ At3g08860~ complete;original_location=join(4225892..4226005%2C4226132..4226362%2C4226495..4226665%2C4227265..4227408%2C4227499..4227678%2C4228061..4228286%2C4228497..4228610%2C4228709..4228795%2C4228891..4228934);owner=coffea | |
| 20130 chr1 manual_curation exon 33025186 33025588 . - . Parent=GSCOCT00016613001 | |
| 20131 chr1 manual_curation exon 33024829 33025059 . - . Parent=GSCOCT00016613001 | |
| 20132 chr1 manual_curation exon 33024526 33024696 . - . Parent=GSCOCT00016613001 | |
| 20133 chr1 manual_curation exon 33023783 33023926 . - . Parent=GSCOCT00016613001 | |
| 20134 chr1 manual_curation exon 33023513 33023692 . - . Parent=GSCOCT00016613001 | |
| 20135 chr1 manual_curation exon 33022905 33023130 . - . Parent=GSCOCT00016613001 | |
| 20136 chr1 manual_curation exon 33022581 33022694 . - . Parent=GSCOCT00016613001 | |
| 20137 chr1 manual_curation exon 33022396 33022482 . - . Parent=GSCOCT00016613001 | |
| 20138 chr1 manual_curation exon 33021906 33022300 . - . Parent=GSCOCT00016613001 | |
| 20139 chr1 manual_curation CDS 33025186 33025299 . - 0 Parent=GSCOCT00016613001 | |
| 20140 chr1 manual_curation CDS 33024829 33025059 . - 0 Parent=GSCOCT00016613001 | |
| 20141 chr1 manual_curation CDS 33024526 33024696 . - 0 Parent=GSCOCT00016613001 | |
| 20142 chr1 manual_curation CDS 33023783 33023926 . - 0 Parent=GSCOCT00016613001 | |
| 20143 chr1 manual_curation CDS 33023513 33023692 . - 0 Parent=GSCOCT00016613001 | |
| 20144 chr1 manual_curation CDS 33022905 33023130 . - 0 Parent=GSCOCT00016613001 | |
| 20145 chr1 manual_curation CDS 33022581 33022694 . - 1 Parent=GSCOCT00016613001 | |
| 20146 chr1 manual_curation CDS 33022396 33022482 . - 1 Parent=GSCOCT00016613001 | |
| 20147 chr1 manual_curation CDS 33022257 33022300 . - 1 Parent=GSCOCT00016613001 | |
| 20148 chr1 manual_curation gene 33029004 33033103 . - . ID=GSCOCG00016612001;Name=Cc01_g15040 | |
| 20149 chr1 manual_curation mRNA 33029004 33033103 . - . ID=GSCOCT00016612001;Parent=GSCOCG00016612001;Name=Cc01_g15040 | |
| 20150 chr1 manual_curation polypeptide 33029290 33033052 . - . ID=GSCOCP00016612001;Dbxref=TAIR:AT2G30280.1,TrEMBL:B9S281,TrEMBL:D7SJM8,TrEMBL:I1N659;Derives_from=GSCOCT00016612001;Name=Cc01_g15040;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative RNA-directed DNA methylation 4,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016612001~ Putative RNA-directed DNA methylation 4~ unknown_gene~ modules;original_location=join(4218139..4218241%2C4218377..4218457%2C4218633..4218724%2C4218915..4218983%2C4219396..4219437%2C4220219..4220367%2C4220450..4220568%2C4221301..4221388%2C4221469..4221539%2C4221633..4221901);owner=coffea | |
| 20151 chr1 manual_curation exon 33032950 33033103 . - . Parent=GSCOCT00016612001 | |
| 20152 chr1 manual_curation exon 33032734 33032814 . - . Parent=GSCOCT00016612001 | |
| 20153 chr1 manual_curation exon 33032467 33032558 . - . Parent=GSCOCT00016612001 | |
| 20154 chr1 manual_curation exon 33032208 33032276 . - . Parent=GSCOCT00016612001 | |
| 20155 chr1 manual_curation exon 33031754 33031795 . - . Parent=GSCOCT00016612001 | |
| 20156 chr1 manual_curation exon 33030824 33030972 . - . Parent=GSCOCT00016612001 | |
| 20157 chr1 manual_curation exon 33030623 33030741 . - . Parent=GSCOCT00016612001 | |
| 20158 chr1 manual_curation exon 33029803 33029890 . - . Parent=GSCOCT00016612001 | |
| 20159 chr1 manual_curation exon 33029652 33029722 . - . Parent=GSCOCT00016612001 | |
| 20160 chr1 manual_curation exon 33029004 33029558 . - . Parent=GSCOCT00016612001 | |
| 20161 chr1 manual_curation CDS 33032950 33033052 . - 0 Parent=GSCOCT00016612001 | |
| 20162 chr1 manual_curation CDS 33032734 33032814 . - 1 Parent=GSCOCT00016612001 | |
| 20163 chr1 manual_curation CDS 33032467 33032558 . - 1 Parent=GSCOCT00016612001 | |
| 20164 chr1 manual_curation CDS 33032208 33032276 . - 0 Parent=GSCOCT00016612001 | |
| 20165 chr1 manual_curation CDS 33031754 33031795 . - 0 Parent=GSCOCT00016612001 | |
| 20166 chr1 manual_curation CDS 33030824 33030972 . - 0 Parent=GSCOCT00016612001 | |
| 20167 chr1 manual_curation CDS 33030623 33030741 . - 2 Parent=GSCOCT00016612001 | |
| 20168 chr1 manual_curation CDS 33029803 33029890 . - 1 Parent=GSCOCT00016612001 | |
| 20169 chr1 manual_curation CDS 33029652 33029722 . - 2 Parent=GSCOCT00016612001 | |
| 20170 chr1 manual_curation CDS 33029290 33029558 . - 1 Parent=GSCOCT00016612001 | |
| 20171 chr1 manual_curation gene 33036612 33038638 . + . ID=GSCOCG00016611001;Name=Cc01_g15050 | |
| 20172 chr1 manual_curation mRNA 33036612 33038638 . + . ID=GSCOCT00016611001;Parent=GSCOCG00016611001;Name=Cc01_g15050 | |
| 20173 chr1 manual_curation polypeptide 33036746 33038414 . + . ID=GSCOCP00016611001;Dbxref=InterPro:IPR010658,InterPro:IPR016196,PFAM:PF06813,SUPERFAMILY:SSF103473,TAIR:AT2G30300.1,TAIR:AT4G19450.1,TAIR:AT5G45275.1,TrEMBL:B9I6U8,TrEMBL:B9INP8,TrEMBL:B9RVI0;Derives_from=GSCOCT00016611001;Name=Cc01_g15050;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Major facilitator superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016611001~ Putative Major facilitator superfamily protein~ unknown_gene~ complete;original_location=complement(join(4213313..4214445%2C4212777..4213203));owner=coffea | |
| 20174 chr1 manual_curation exon 33037988 33038638 . + . Parent=GSCOCT00016611001 | |
| 20175 chr1 manual_curation exon 33036612 33037878 . + . Parent=GSCOCT00016611001 | |
| 20176 chr1 manual_curation CDS 33037988 33038414 . + 2 Parent=GSCOCT00016611001 | |
| 20177 chr1 manual_curation CDS 33036746 33037878 . + 0 Parent=GSCOCT00016611001 | |
| 20178 chr1 manual_curation gene 33043243 33048339 . - . ID=GSCOCG00016610001;Name=Cc01_g15060 | |
| 20179 chr1 manual_curation mRNA 33043243 33048339 . - . ID=GSCOCT00016610001;Parent=GSCOCG00016610001;Name=Cc01_g15060 | |
| 20180 chr1 manual_curation polypeptide 33043836 33048149 . - . ID=GSCOCP00016610001;Dbxref=GENE3D:G3DSA:3.30.70.580,InterPro:IPR001406,InterPro:IPR020094,InterPro:IPR020097,InterPro:IPR020103,PANTHER:PTHR11142,PFAM:PF01416,SUPERFAMILY:SSF55120,SwissProt:O22928,SwissProt:Q12211,SwissProt:Q6FV05,TAIR:AT1G20370.1,TAIR:AT1G76120.1,TAIR:AT2G30320.1,TrEMBL:A5C2V2,TrEMBL:B9I6V0,TrEMBL:F6GUG3;Derives_from=GSCOCT00016610001;Name=Cc01_g15060;Ontology_term=CC_evidence_code:ISS,GO:0001522,GO:0003723,GO:0009451,GO:0009982,CC_EC_number:missing_EC_number,PRODUCT:Putative tRNA pseudouridine synthase,CC_functional_completeness:complete,CC_gene:At2g30320,CC_gene:PUS1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016610001~ Putative tRNA pseudouridine synthase~ At2g30320~ complete;original_location=join(4203042..4203312%2C4203456..4203491%2C4204034..4204146%2C4204241..4204389%2C4205337..4205481%2C4205788..4206273%2C4206939..4207355);owner=coffea | |
| 20181 chr1 manual_curation exon 33047879 33048339 . - . Parent=GSCOCT00016610001 | |
| 20182 chr1 manual_curation exon 33047700 33047735 . - . Parent=GSCOCT00016610001 | |
| 20183 chr1 manual_curation exon 33047045 33047157 . - . Parent=GSCOCT00016610001 | |
| 20184 chr1 manual_curation exon 33046802 33046950 . - . Parent=GSCOCT00016610001 | |
| 20185 chr1 manual_curation exon 33045710 33045854 . - . Parent=GSCOCT00016610001 | |
| 20186 chr1 manual_curation exon 33044918 33045403 . - . Parent=GSCOCT00016610001 | |
| 20187 chr1 manual_curation exon 33043243 33044252 . - . Parent=GSCOCT00016610001 | |
| 20188 chr1 manual_curation CDS 33047879 33048149 . - 0 Parent=GSCOCT00016610001 | |
| 20189 chr1 manual_curation CDS 33047700 33047735 . - 1 Parent=GSCOCT00016610001 | |
| 20190 chr1 manual_curation CDS 33047045 33047157 . - 1 Parent=GSCOCT00016610001 | |
| 20191 chr1 manual_curation CDS 33046802 33046950 . - 0 Parent=GSCOCT00016610001 | |
| 20192 chr1 manual_curation CDS 33045710 33045854 . - 2 Parent=GSCOCT00016610001 | |
| 20193 chr1 manual_curation CDS 33044918 33045403 . - 0 Parent=GSCOCT00016610001 | |
| 20194 chr1 manual_curation CDS 33043836 33044252 . - 0 Parent=GSCOCT00016610001 | |
| 20195 chr1 manual_curation gene 33057154 33065355 . + . ID=GSCOCG00016608001;Name=Cc01_g15070 | |
| 20196 chr1 manual_curation mRNA 33057154 33065355 . + . ID=GSCOCT00016608001;Parent=GSCOCG00016608001;Name=Cc01_g15070 | |
| 20197 chr1 manual_curation polypeptide 33057154 33065108 . + . ID=GSCOCP00016608001;Dbxref=SwissProt:O24303,SwissProt:Q8LPR9,TAIR:AT1G06950.1,TrEMBL:A5B1M8,TrEMBL:B9RVF9,TrEMBL:D7SJM2;Derives_from=GSCOCT00016608001;Name=Cc01_g15070;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein TIC110%2C chloroplastic,CC_functional_completeness:complete,CC_gene:TIC110;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016608001~ Protein TIC110%2C chloroplastic~ TIC110~ complete;original_location=complement(join(4193493..4194037%2C4192592..4192651%2C4192209..4192332%2C4192021..4192089%2C4191818..4191916%2C4191551..4191617%2C4190736..4190800%2C4190517..4190611%2C4190080..4190204%2C4189802..4189902%2C4188595..4188811%2C4188206..4188360%2C4187547..4187672%2C4186430..4187401%2C4186083..4186334));owner=coffea | |
| 20198 chr1 manual_curation exon 33064857 33065355 . + . Parent=GSCOCT00016608001 | |
| 20199 chr1 manual_curation exon 33063790 33064761 . + . Parent=GSCOCT00016608001 | |
| 20200 chr1 manual_curation exon 33063519 33063644 . + . Parent=GSCOCT00016608001 | |
| 20201 chr1 manual_curation exon 33062831 33062985 . + . Parent=GSCOCT00016608001 | |
| 20202 chr1 manual_curation exon 33062380 33062596 . + . Parent=GSCOCT00016608001 | |
| 20203 chr1 manual_curation exon 33061289 33061389 . + . Parent=GSCOCT00016608001 | |
| 20204 chr1 manual_curation exon 33060987 33061111 . + . Parent=GSCOCT00016608001 | |
| 20205 chr1 manual_curation exon 33060580 33060674 . + . Parent=GSCOCT00016608001 | |
| 20206 chr1 manual_curation exon 33060391 33060455 . + . Parent=GSCOCT00016608001 | |
| 20207 chr1 manual_curation exon 33059574 33059640 . + . Parent=GSCOCT00016608001 | |
| 20208 chr1 manual_curation exon 33059275 33059373 . + . Parent=GSCOCT00016608001 | |
| 20209 chr1 manual_curation exon 33059102 33059170 . + . Parent=GSCOCT00016608001 | |
| 20210 chr1 manual_curation exon 33058859 33058982 . + . Parent=GSCOCT00016608001 | |
| 20211 chr1 manual_curation exon 33058540 33058599 . + . Parent=GSCOCT00016608001 | |
| 20212 chr1 manual_curation exon 33057154 33057698 . + . Parent=GSCOCT00016608001 | |
| 20213 chr1 manual_curation CDS 33064857 33065108 . + 0 Parent=GSCOCT00016608001 | |
| 20214 chr1 manual_curation CDS 33063790 33064761 . + 0 Parent=GSCOCT00016608001 | |
| 20215 chr1 manual_curation CDS 33063519 33063644 . + 0 Parent=GSCOCT00016608001 | |
| 20216 chr1 manual_curation CDS 33062831 33062985 . + 1 Parent=GSCOCT00016608001 | |
| 20217 chr1 manual_curation CDS 33062380 33062596 . + 0 Parent=GSCOCT00016608001 | |
| 20218 chr1 manual_curation CDS 33061289 33061389 . + 1 Parent=GSCOCT00016608001 | |
| 20219 chr1 manual_curation CDS 33060987 33061111 . + 2 Parent=GSCOCT00016608001 | |
| 20220 chr1 manual_curation CDS 33060580 33060674 . + 0 Parent=GSCOCT00016608001 | |
| 20221 chr1 manual_curation CDS 33060391 33060455 . + 1 Parent=GSCOCT00016608001 | |
| 20222 chr1 manual_curation CDS 33059574 33059640 . + 0 Parent=GSCOCT00016608001 | |
| 20223 chr1 manual_curation CDS 33059275 33059373 . + 0 Parent=GSCOCT00016608001 | |
| 20224 chr1 manual_curation CDS 33059102 33059170 . + 0 Parent=GSCOCT00016608001 | |
| 20225 chr1 manual_curation CDS 33058859 33058982 . + 2 Parent=GSCOCT00016608001 | |
| 20226 chr1 manual_curation CDS 33058540 33058599 . + 2 Parent=GSCOCT00016608001 | |
| 20227 chr1 manual_curation CDS 33057154 33057698 . + 0 Parent=GSCOCT00016608001 | |
| 20228 chr1 manual_curation gene 33067135 33069540 . + . ID=GSCOCG00016607001;Name=Cc01_g15080 | |
| 20229 chr1 manual_curation mRNA 33067135 33069540 . + . ID=GSCOCT00016607001;Parent=GSCOCG00016607001;Name=Cc01_g15080 | |
| 20230 chr1 manual_curation polypeptide 33067135 33069540 . + . ID=GSCOCP00016607001;Dbxref=InterPro:IPR000823,InterPro:IPR002016,InterPro:IPR010255,InterPro:IPR019793,InterPro:IPR019794,PFAM:PF00141,PRINTS:PR00458,PRINTS:PR00461,PROFILE:PS50873,PROSITE:PS00435,PROSITE:PS00436,SUPERFAMILY:SSF48113,SwissProt:A7NY33,SwissProt:P00434,SwissProt:P22195,TAIR:AT5G05340.1,TAIR:AT5G58390.1,TAIR:AT5G58400.1,TrEMBL:B9I6V2,TrEMBL:B9RVF8,TrEMBL:I1MBI7;Derives_from=GSCOCT00016607001;Name=Cc01_g15080;Ontology_term=CC_evidence_code:ISS,GO:0004601,GO:0006979,GO:0020037,GO:0055114,CC_EC_number:1.11.1.7,PRODUCT:Cationic peroxidase 1,CC_functional_completeness:complete,CC_gene:PNC1,CC_gene:GSVIVT00023967001;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016607001~ Cationic peroxidase 1~ PNC1~ complete;original_location=complement(join(4184015..4184056%2C4182891..4183082%2C4182489..4182660%2C4181651..4182036));owner=coffea | |
| 20231 chr1 manual_curation exon 33069155 33069540 . + . Parent=GSCOCT00016607001 | |
| 20232 chr1 manual_curation exon 33068531 33068702 . + . Parent=GSCOCT00016607001 | |
| 20233 chr1 manual_curation exon 33068109 33068300 . + . Parent=GSCOCT00016607001 | |
| 20234 chr1 manual_curation exon 33067135 33067176 . + . Parent=GSCOCT00016607001 | |
| 20235 chr1 manual_curation CDS 33069155 33069540 . + 1 Parent=GSCOCT00016607001 | |
| 20236 chr1 manual_curation CDS 33068531 33068702 . + 0 Parent=GSCOCT00016607001 | |
| 20237 chr1 manual_curation CDS 33068109 33068300 . + 0 Parent=GSCOCT00016607001 | |
| 20238 chr1 manual_curation CDS 33067135 33067176 . + 0 Parent=GSCOCT00016607001 | |
| 20239 chr1 manual_curation gene 33070947 33072160 . - . ID=GSCOCG00016606001;Name=Cc01_g15090 | |
| 20240 chr1 manual_curation mRNA 33070947 33072160 . - . ID=GSCOCT00016606001;Parent=GSCOCG00016606001;Name=Cc01_g15090 | |
| 20241 chr1 manual_curation polypeptide 33070947 33072160 . - . ID=GSCOCP00016606001;Dbxref=InterPro:IPR000823,InterPro:IPR002016,InterPro:IPR010255,InterPro:IPR019793,InterPro:IPR019794,PFAM:PF00141,PRINTS:PR00458,PRINTS:PR00461,PROFILE:PS50873,PROSITE:PS00435,PROSITE:PS00436,SUPERFAMILY:SSF48113,SwissProt:A5H452,SwissProt:A7NY33,SwissProt:P22195,TAIR:AT5G05340.1,TAIR:AT5G58390.1,TAIR:AT5G58400.1,TrEMBL:A5BJV8,TrEMBL:B9I6X4,TrEMBL:F6GUC8;Derives_from=GSCOCT00016606001;Name=Cc01_g15090;Ontology_term=CC_evidence_code:ISS,GO:0004601,GO:0006979,GO:0020037,GO:0055114,CC_EC_number:1.11.1.7,PRODUCT:Peroxidase 4,CC_functional_completeness:complete,CC_gene:GSVIVT00023967001,CC_gene:PNC1,CC_gene:PER70;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016606001~ Peroxidase 4~ GSVIVT00023967001~ complete;original_location=join(4179031..4179243%2C4179403..4179597%2C4179687..4180244);owner=coffea | |
| 20242 chr1 manual_curation exon 33071948 33072160 . - . Parent=GSCOCT00016606001 | |
| 20243 chr1 manual_curation exon 33071594 33071788 . - . Parent=GSCOCT00016606001 | |
| 20244 chr1 manual_curation exon 33070947 33071504 . - . Parent=GSCOCT00016606001 | |
| 20245 chr1 manual_curation CDS 33071948 33072160 . - 0 Parent=GSCOCT00016606001 | |
| 20246 chr1 manual_curation CDS 33071594 33071788 . - 0 Parent=GSCOCT00016606001 | |
| 20247 chr1 manual_curation CDS 33070947 33071504 . - 0 Parent=GSCOCT00016606001 | |
| 20248 chr1 manual_curation gene 33086259 33087302 . - . ID=GSCOCG00016605001;Name=Cc01_g15100 | |
| 20249 chr1 manual_curation mRNA 33086259 33087302 . - . ID=GSCOCT00016605001;Parent=GSCOCG00016605001;Name=Cc01_g15100 | |
| 20250 chr1 manual_curation polypeptide 33086259 33087302 . - . ID=GSCOCP00016605001;Dbxref=SwissProt:Q8K368,SwissProt:Q9NVI1,TAIR:AT5G49110.2,TrEMBL:A5BC88,TrEMBL:B9RT78,TrEMBL:F6H6X9;Derives_from=GSCOCT00016605001;Name=Cc01_g15100;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B INVOLVED IN,CC_functional_completeness:fragment,CC_gene:Fanci,CC_gene:FANCI;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016605001~ Putative unknown protein%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: cultured cell%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ Fanci~ fragment;original_location=join(4163889..4164015%2C4164123..4164313%2C4164423..4164932);owner=coffea | |
| 20251 chr1 manual_curation exon 33087176 33087302 . - . Parent=GSCOCT00016605001 | |
| 20252 chr1 manual_curation exon 33086878 33087068 . - . Parent=GSCOCT00016605001 | |
| 20253 chr1 manual_curation exon 33086259 33086768 . - . Parent=GSCOCT00016605001 | |
| 20254 chr1 manual_curation CDS 33087176 33087302 . - 0 Parent=GSCOCT00016605001 | |
| 20255 chr1 manual_curation CDS 33086878 33087068 . - 1 Parent=GSCOCT00016605001 | |
| 20256 chr1 manual_curation CDS 33086259 33086768 . - 0 Parent=GSCOCT00016605001 | |
| 20257 chr1 manual_curation gene 33098254 33100732 . + . ID=GSCOCG00016604001;Name=Cc01_g15110 | |
| 20258 chr1 manual_curation mRNA 33098254 33100732 . + . ID=GSCOCT00016604001;Parent=GSCOCG00016604001;Name=Cc01_g15110 | |
| 20259 chr1 manual_curation polypeptide 33098492 33100372 . + . ID=GSCOCP00016604001;Dbxref=InterPro:IPR000823,InterPro:IPR002016,InterPro:IPR010255,InterPro:IPR019793,InterPro:IPR019794,PFAM:PF00141,PRINTS:PR00458,PRINTS:PR00461,PROFILE:PS50873,PROSITE:PS00435,PROSITE:PS00436,SUPERFAMILY:SSF48113,SwissProt:A7NY33,SwissProt:Q9FLC0,SwissProt:Q9LVL1,TAIR:AT5G05340.1,TAIR:AT5G58390.1,TAIR:AT5G58400.1,TrEMBL:B3SRB5,TrEMBL:B9I6X2,TrEMBL:D7SJL8;Derives_from=GSCOCT00016604001;Name=Cc01_g15110;Ontology_term=CC_evidence_code:ISS,GO:0004601,GO:0006979,GO:0020037,GO:0055114,CC_EC_number:1.11.1.7,PRODUCT:Peroxidase 4,CC_functional_completeness:complete,CC_gene:GSVIVT00023967001,CC_gene:PER52,CC_gene:PER68;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016604001~ Peroxidase 4~ GSVIVT00023967001~ complete;original_location=complement(join(4152502..4152699%2C4151866..4152057%2C4151549..4151717%2C4150819..4151210));owner=coffea | |
| 20260 chr1 manual_curation exon 33099981 33100732 . + . Parent=GSCOCT00016604001 | |
| 20261 chr1 manual_curation exon 33099474 33099642 . + . Parent=GSCOCT00016604001 | |
| 20262 chr1 manual_curation exon 33099134 33099325 . + . Parent=GSCOCT00016604001 | |
| 20263 chr1 manual_curation exon 33098254 33098689 . + . Parent=GSCOCT00016604001 | |
| 20264 chr1 manual_curation CDS 33099981 33100372 . + 1 Parent=GSCOCT00016604001 | |
| 20265 chr1 manual_curation CDS 33099474 33099642 . + 0 Parent=GSCOCT00016604001 | |
| 20266 chr1 manual_curation CDS 33099134 33099325 . + 0 Parent=GSCOCT00016604001 | |
| 20267 chr1 manual_curation CDS 33098492 33098689 . + 0 Parent=GSCOCT00016604001 | |
| 20268 chr1 manual_curation gene 33107978 33108848 . - . ID=GSCOCG00016603001;Name=Cc01_g15120 | |
| 20269 chr1 manual_curation mRNA 33107978 33108848 . - . ID=GSCOCT00016603001;Parent=GSCOCG00016603001;Name=Cc01_g15120 | |
| 20270 chr1 manual_curation polypeptide 33107978 33108848 . - . ID=GSCOCP00016603001;Dbxref=InterPro:IPR004883,PFAM:PF03195,PROFILE:PS50891,SwissProt:Q8L5T5,SwissProt:Q8LBW3,SwissProt:Q9AT61,TAIR:AT2G30130.1,TAIR:AT2G30340.1,TAIR:AT2G40470.1,TrEMBL:B9S4B8,TrEMBL:D7T4G0;Derives_from=GSCOCT00016603001;Name=Cc01_g15120;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:LBD13,CC_gene:LBD15,CC_gene:LBD12;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016603001~ Putative uncharacterized protein~ LBD13~ complete;original_location=join(4142343..4142519%2C4142734..4143213);owner=coffea | |
| 20271 chr1 manual_curation exon 33108672 33108848 . - . Parent=GSCOCT00016603001 | |
| 20272 chr1 manual_curation exon 33107978 33108457 . - . Parent=GSCOCT00016603001 | |
| 20273 chr1 manual_curation CDS 33108672 33108848 . - 0 Parent=GSCOCT00016603001 | |
| 20274 chr1 manual_curation CDS 33107978 33108457 . - 0 Parent=GSCOCT00016603001 | |
| 20275 chr1 manual_curation gene 33123594 33126551 . + . ID=GSCOCG00016600001;Name=Cc01_g15130 | |
| 20276 chr1 manual_curation mRNA 33123594 33126551 . + . ID=GSCOCT00016600001;Parent=GSCOCG00016600001;Name=Cc01_g15130 | |
| 20277 chr1 manual_curation polypeptide 33125100 33126551 . + . ID=GSCOCP00016600001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR004041,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR018451,InterPro:IPR020635,InterPro:IPR020636,InterPro:IPR020660,PANTHER:PTHR22982,PANTHER:PTHR22982:SF45,PFAM:PF00069,PFAM:PF03822,PROFILE:PS50011,PROFILE:PS50816,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q5W736,SwissProt:Q7X996,SwissProt:Q9C562,TAIR:AT5G07070.1,TAIR:AT5G45820.1,TAIR:AT5G58380.1,TrEMBL:A5BJJ8,TrEMBL:B0FM67,TrEMBL:F6GUC6;Derives_from=GSCOCT00016600001;Name=Cc01_g15130;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,GO:0007165,CC_EC_number:2.7.11.17,PRODUCT:CBL-interacting serine/threonine-protein kinase 10,CC_functional_completeness:complete,CC_gene:CIPK10,CC_gene:CIPK2,CC_gene:CIPK18;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016600001~ CBL-interacting serine/threonine-protein kinase 10~ CIPK10~ complete;original_location=complement(4124640..4126091);owner=coffea | |
| 20278 chr1 manual_curation exon 33123594 33123740 . + . Parent=GSCOCT00016600001 | |
| 20279 chr1 manual_curation exon 33124660 33126551 . + . Parent=GSCOCT00016600001 | |
| 20280 chr1 manual_curation CDS 33125100 33126551 . + 0 Parent=GSCOCT00016600001 | |
| 20281 chr1 manual_curation gene 33126875 33128477 . - . ID=GSCOCG00016599001;Name=Cc01_g15140 | |
| 20282 chr1 manual_curation mRNA 33126875 33128477 . - . ID=GSCOCT00016599001;Parent=GSCOCG00016599001;Name=Cc01_g15140 | |
| 20283 chr1 manual_curation polypeptide 33127475 33128185 . - . ID=GSCOCP00016599001;Dbxref=TAIR:AT5G15802.1,TrEMBL:B6SLL5,TrEMBL:B9N6N5,TrEMBL:D7T7Y5;Derives_from=GSCOCT00016599001;Name=Cc01_g15140;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016599001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B Has 35 Blast hits to 35 proteins in 15 species: Archae - 0%3B Bacteria - 4%3B Metazoa - 0%3B Fungi - 0%3B Plants - 31%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(4123006..4123121%2C4123491..4123716);owner=coffea | |
| 20284 chr1 manual_curation exon 33128070 33128477 . - . Parent=GSCOCT00016599001 | |
| 20285 chr1 manual_curation exon 33126875 33127700 . - . Parent=GSCOCT00016599001 | |
| 20286 chr1 manual_curation CDS 33128070 33128185 . - 0 Parent=GSCOCT00016599001 | |
| 20287 chr1 manual_curation CDS 33127475 33127700 . - 2 Parent=GSCOCT00016599001 | |
| 20288 chr1 manual_curation gene 33129052 33131206 . - . ID=GSCOCG00016598001;Name=Cc01_g15150 | |
| 20289 chr1 manual_curation mRNA 33129052 33131206 . - . ID=GSCOCT00016598001;Parent=GSCOCG00016598001;Name=Cc01_g15150 | |
| 20290 chr1 manual_curation polypeptide 33129052 33130982 . - . ID=GSCOCP00016598001;Dbxref=InterPro:IPR000305,PFAM:PF01541,SwissProt:Q4CTY5,SwissProt:Q5PQP5,SwissProt:Q8BX32,TAIR:AT2G30350.2,TrEMBL:F6GUC5,TrEMBL:I1LLV5,TrEMBL:I1MZS6;Derives_from=GSCOCT00016598001;Name=Cc01_g15150;Ontology_term=CC_evidence_code:ISS,GO:0004518,GO:0005622,GO:0006281,CC_EC_number:missing_EC_number,PRODUCT:Putative Excinuclease ABC%2C C subunit%2C N-terminal,CC_functional_completeness:complete,CC_gene:Slx1b,CC_gene:Tc00.1047053511881.30;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016598001~ Putative Excinuclease ABC%2C C subunit%2C N-terminal~ Slx1b~ complete;original_location=join(4120209..4120402%2C4120594..4120732%2C4121210..4121343%2C4121434..4122139);owner=coffea | |
| 20291 chr1 manual_curation exon 33130789 33131206 . - . Parent=GSCOCT00016598001 | |
| 20292 chr1 manual_curation exon 33130459 33130597 . - . Parent=GSCOCT00016598001 | |
| 20293 chr1 manual_curation exon 33129848 33129981 . - . Parent=GSCOCT00016598001 | |
| 20294 chr1 manual_curation exon 33129052 33129757 . - . Parent=GSCOCT00016598001 | |
| 20295 chr1 manual_curation CDS 33130789 33130982 . - 0 Parent=GSCOCT00016598001 | |
| 20296 chr1 manual_curation CDS 33130459 33130597 . - 2 Parent=GSCOCT00016598001 | |
| 20297 chr1 manual_curation CDS 33129848 33129981 . - 0 Parent=GSCOCT00016598001 | |
| 20298 chr1 manual_curation CDS 33129052 33129757 . - 2 Parent=GSCOCT00016598001 | |
| 20299 chr1 manual_curation gene 33133725 33134576 . - . ID=GSCOCG00016597001;Name=Cc01_g15160 | |
| 20300 chr1 manual_curation mRNA 33133725 33134576 . - . ID=GSCOCT00016597001;Parent=GSCOCG00016597001;Name=Cc01_g15160 | |
| 20301 chr1 manual_curation polypeptide 33133970 33134369 . - . ID=GSCOCP00016597001;Dbxref=TAIR:AT5G14602.1,TAIR:AT5G18150.1,TAIR:AT5G58375.1,TrEMBL:D7SJL0,TrEMBL:F2D573,TrEMBL:G7KFN2;Derives_from=GSCOCT00016597001;Name=Cc01_g15160;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Methyltransferase-related protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016597001~ Methyltransferase-related protein~ unknown_gene~ complete;original_location=join(4116822..4116998%2C4117102..4117221);owner=coffea | |
| 20302 chr1 manual_curation exon 33134193 33134576 . - . Parent=GSCOCT00016597001 | |
| 20303 chr1 manual_curation exon 33133725 33134089 . - . Parent=GSCOCT00016597001 | |
| 20304 chr1 manual_curation CDS 33134193 33134369 . - 0 Parent=GSCOCT00016597001 | |
| 20305 chr1 manual_curation CDS 33133970 33134089 . - 0 Parent=GSCOCT00016597001 | |
| 20306 chr1 manual_curation gene 33135900 33141694 . - . ID=GSCOCG00016596001;Name=Cc01_g15170 | |
| 20307 chr1 manual_curation mRNA 33135900 33141694 . - . ID=GSCOCT00016596001;Parent=GSCOCG00016596001;Name=Cc01_g15170 | |
| 20308 chr1 manual_curation polypeptide 33136509 33141292 . - . ID=GSCOCP00016596001;Dbxref=HAMAP:MF_00321,InterPro:IPR002917,InterPro:IPR005225,InterPro:IPR019987,PFAM:PF01926,SwissProt:Q1GJX8,SwissProt:Q3IYY4,SwissProt:Q5FPX9,TAIR:AT2G22870.1,TAIR:AT5G11480.1,TAIR:AT5G58370.2,TIGRFAMs:TIGR00231,TIGRFAMs:TIGR03598,TrEMBL:B9RVE2,TrEMBL:D7MQC4,TrEMBL:I1LLV7;Derives_from=GSCOCT00016596001;Name=Cc01_g15170;Ontology_term=CC_evidence_code:ISS,GO:0000917,GO:0005525,GO:0005622,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable GTP-binding protein EngB,CC_functional_completeness:modules,CC_gene:engB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016596001~ Putative Probable GTP-binding protein EngB~ engB~ modules;original_location=join(4109899..4110745%2C4111534..4111652%2C4111777..4111896%2C4112083..4112170%2C4112834..4112925%2C4113002..4113106%2C4113766..4113875%2C4114287..4114374%2C4114466..4114501%2C4114599..4114682);owner=coffea | |
| 20309 chr1 manual_curation exon 33141589 33141694 . - . Parent=GSCOCT00016596001 | |
| 20310 chr1 manual_curation exon 33135900 33136320 . - . Parent=GSCOCT00016596001 | |
| 20311 chr1 manual_curation exon 33140446 33141390 . - . Parent=GSCOCT00016596001 | |
| 20312 chr1 manual_curation exon 33139539 33139657 . - . Parent=GSCOCT00016596001 | |
| 20313 chr1 manual_curation exon 33139295 33139414 . - . Parent=GSCOCT00016596001 | |
| 20314 chr1 manual_curation exon 33139021 33139108 . - . Parent=GSCOCT00016596001 | |
| 20315 chr1 manual_curation exon 33138266 33138357 . - . Parent=GSCOCT00016596001 | |
| 20316 chr1 manual_curation exon 33138085 33138189 . - . Parent=GSCOCT00016596001 | |
| 20317 chr1 manual_curation exon 33137316 33137425 . - . Parent=GSCOCT00016596001 | |
| 20318 chr1 manual_curation exon 33136817 33136904 . - . Parent=GSCOCT00016596001 | |
| 20319 chr1 manual_curation exon 33136690 33136725 . - . Parent=GSCOCT00016596001 | |
| 20320 chr1 manual_curation exon 33136408 33136592 . - . Parent=GSCOCT00016596001 | |
| 20321 chr1 manual_curation CDS 33140446 33141292 . - 0 Parent=GSCOCT00016596001 | |
| 20322 chr1 manual_curation CDS 33139539 33139657 . - 1 Parent=GSCOCT00016596001 | |
| 20323 chr1 manual_curation CDS 33139295 33139414 . - 0 Parent=GSCOCT00016596001 | |
| 20324 chr1 manual_curation CDS 33139021 33139108 . - 0 Parent=GSCOCT00016596001 | |
| 20325 chr1 manual_curation CDS 33138266 33138357 . - 1 Parent=GSCOCT00016596001 | |
| 20326 chr1 manual_curation CDS 33138085 33138189 . - 0 Parent=GSCOCT00016596001 | |
| 20327 chr1 manual_curation CDS 33137316 33137425 . - 0 Parent=GSCOCT00016596001 | |
| 20328 chr1 manual_curation CDS 33136817 33136904 . - 2 Parent=GSCOCT00016596001 | |
| 20329 chr1 manual_curation CDS 33136690 33136725 . - 0 Parent=GSCOCT00016596001 | |
| 20330 chr1 manual_curation CDS 33136509 33136592 . - 0 Parent=GSCOCT00016596001 | |
| 20331 chr1 manual_curation gene 33147508 33150028 . - . ID=GSCOCG00016595001;Name=Cc01_g15180 | |
| 20332 chr1 manual_curation mRNA 33147508 33150028 . - . ID=GSCOCT00016595001;Parent=GSCOCG00016595001;Name=Cc01_g15180 | |
| 20333 chr1 manual_curation polypeptide 33148457 33149785 . - . ID=GSCOCP00016595001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR004041,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR018451,InterPro:IPR020635,InterPro:IPR020636,InterPro:IPR020660,PANTHER:PTHR22982,PANTHER:PTHR22982:SF45,PFAM:PF00069,PFAM:PF03822,PROFILE:PS50011,PROFILE:PS50816,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:O22932,SwissProt:Q9FJ55,SwissProt:Q9SN43,TAIR:AT2G30360.1,TAIR:AT4G18700.1,TAIR:AT5G45810.1,TrEMBL:A0MNK3,TrEMBL:B9I6W4,TrEMBL:B9RVE0;Derives_from=GSCOCT00016595001;Name=Cc01_g15180;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,GO:0007165,CC_EC_number:2.7.11.17,PRODUCT:CBL-interacting serine/threonine-protein kinase 11,CC_functional_completeness:complete,CC_gene:CIPK11,CC_gene:CIPK12,CC_gene:CIPK19;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016595001~ CBL-interacting serine/threonine-protein kinase 11~ CIPK11~ complete;original_location=4101406..4102734;owner=coffea | |
| 20334 chr1 manual_curation exon 33147508 33150028 . - . Parent=GSCOCT00016595001 | |
| 20335 chr1 manual_curation CDS 33148457 33149785 . - 0 Parent=GSCOCT00016595001 | |
| 20336 chr1 manual_curation gene 33158010 33162293 . - . ID=GSCOCG00016594001;Name=Cc01_g15190 | |
| 20337 chr1 manual_curation mRNA 33158010 33162293 . - . ID=GSCOCT00016594001;Parent=GSCOCG00016594001;Name=Cc01_g15190 | |
| 20338 chr1 manual_curation polypeptide 33158010 33161405 . - . ID=GSCOCP00016594001;Dbxref=SwissProt:Q1PEY6,SwissProt:Q2V3I3,SwissProt:Q9LUH9,TAIR:AT2G30370.1,TAIR:AT3G22820.1,TAIR:AT4G14723.1,TrEMBL:D7SJK7,TrEMBL:I1JHL0,TrEMBL:I1MBK0;Derives_from=GSCOCT00016594001;Name=Cc01_g15190;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative EPIDERMAL PATTERNING FACTOR-like protein 6,CC_functional_completeness:fragment,CC_gene:EPFL6,CC_gene:EPFL4,CC_gene:EPFL5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016594001~ Putative EPIDERMAL PATTERNING FACTOR-like protein 6~ EPFL6~ fragment;original_location=join(4089786..4089909%2C4090162..4090211%2C4092936..4093181);owner=coffea | |
| 20339 chr1 manual_curation exon 33161282 33162293 . - . Parent=GSCOCT00016594001 | |
| 20340 chr1 manual_curation exon 33160980 33161029 . - . Parent=GSCOCT00016594001 | |
| 20341 chr1 manual_curation exon 33158010 33158255 . - . Parent=GSCOCT00016594001 | |
| 20342 chr1 manual_curation CDS 33161282 33161405 . - 0 Parent=GSCOCT00016594001 | |
| 20343 chr1 manual_curation CDS 33160980 33161029 . - 1 Parent=GSCOCT00016594001 | |
| 20344 chr1 manual_curation CDS 33158010 33158255 . - 0 Parent=GSCOCT00016594001 | |
| 20345 chr1 manual_curation gene 33171776 33173101 . + . ID=GSCOCG00016592001;Name=Cc01_g15200 | |
| 20346 chr1 manual_curation mRNA 33171776 33173101 . + . ID=GSCOCT00016592001;Parent=GSCOCG00016592001;Name=Cc01_g15200 | |
| 20347 chr1 manual_curation polypeptide 33171776 33173101 . + . ID=GSCOCP00016592001;Dbxref=InterPro:IPR006943,PFAM:PF04859,TAIR:AT1G29300.1,TAIR:AT2G30380.1,TAIR:AT2G45260.1,TrEMBL:B9RX03,TrEMBL:F6GUC2,TrEMBL:I1MBK1;Derives_from=GSCOCT00016592001;Name=Cc01_g15200;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Plant protein of unknown function (DUF641),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016592001~ Putative Plant protein of unknown function (DUF641)~ unknown_gene~ complete;original_location=complement(4078090..4079415);owner=coffea | |
| 20348 chr1 manual_curation exon 33171776 33173101 . + . Parent=GSCOCT00016592001 | |
| 20349 chr1 manual_curation CDS 33171776 33173101 . + 0 Parent=GSCOCT00016592001 | |
| 20350 chr1 manual_curation gene 33173758 33174998 . - . ID=GSCOCG00016591001;Name=Cc01_g15210 | |
| 20351 chr1 manual_curation mRNA 33173758 33174998 . - . ID=GSCOCT00016591001;Parent=GSCOCG00016591001;Name=Cc01_g15210 | |
| 20352 chr1 manual_curation polypeptide 33174444 33174998 . - . ID=GSCOCP00016591001;Dbxref=TAIR:AT1G06923.1,TAIR:AT2G30395.1,TrEMBL:B9RX04,TrEMBL:D7SJK5,TrEMBL:I1JHL3;Derives_from=GSCOCT00016591001;Name=Cc01_g15210;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative ovate family protein 17,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016591001~ Putative ovate family protein 17~ unknown_gene~ complete;original_location=4076193..4076747;owner=coffea | |
| 20353 chr1 manual_curation exon 33173758 33174998 . - . Parent=GSCOCT00016591001 | |
| 20354 chr1 manual_curation CDS 33174444 33174998 . - 0 Parent=GSCOCT00016591001 | |
| 20355 chr1 manual_curation gene 33178854 33180068 . + . ID=GSCOCG00016590001;Name=Cc01_g15220 | |
| 20356 chr1 manual_curation mRNA 33178854 33180068 . + . ID=GSCOCT00016590001;Parent=GSCOCG00016590001;Name=Cc01_g15220 | |
| 20357 chr1 manual_curation polypeptide 33178854 33180068 . + . ID=GSCOCP00016590001;Dbxref=InterPro:IPR006458,PFAM:PF04844,TAIR:AT1G06920.1,TAIR:AT2G30400.1,TAIR:AT5G58360.1,TIGRFAMs:TIGR01568,TrEMBL:B9I6W0,TrEMBL:F6GUC1,TrEMBL:F6GXX8;Derives_from=GSCOCT00016590001;Name=Cc01_g15220;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative ovate family protein 3,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016590001~ Putative ovate family protein 3~ unknown_gene~ complete;original_location=complement(4071123..4072337);owner=coffea | |
| 20358 chr1 manual_curation exon 33178854 33180068 . + . Parent=GSCOCT00016590001 | |
| 20359 chr1 manual_curation CDS 33178854 33180068 . + 0 Parent=GSCOCT00016590001 | |
| 20360 chr1 manual_curation gene 33188246 33193577 . - . ID=GSCOCG00016588001;Name=Cc01_g15230 | |
| 20361 chr1 manual_curation mRNA 33188246 33193577 . - . ID=GSCOCT00016588001;Parent=GSCOCG00016588001;Name=Cc01_g15230 | |
| 20362 chr1 manual_curation polypeptide 33188544 33192802 . - . ID=GSCOCP00016588001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:A2YMV6,SwissProt:Q9LVL5,SwissProt:Q9SCU5,TAIR:AT3G51630.1,TAIR:AT5G28080.2,TAIR:AT5G58350.1,TrEMBL:B0FX62,TrEMBL:D7SJK3,TrEMBL:Q6EIX6;Derives_from=GSCOCT00016588001;Name=Cc01_g15230;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Probable serine/threonine-protein kinase WNK4,CC_functional_completeness:complete,CC_gene:WNK4,CC_gene:WNK5,CC_gene:WNK1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016588001~ Probable serine/threonine-protein kinase WNK4~ WNK4~ complete;original_location=join(4058389..4058490%2C4059293..4059558%2C4060162..4060385%2C4060771..4060928%2C4061007..4061319%2C4061617..4061895%2C4062142..4062647);owner=coffea | |
| 20363 chr1 manual_curation exon 33192701 33193577 . - . Parent=GSCOCT00016588001 | |
| 20364 chr1 manual_curation exon 33191633 33191898 . - . Parent=GSCOCT00016588001 | |
| 20365 chr1 manual_curation exon 33190806 33191029 . - . Parent=GSCOCT00016588001 | |
| 20366 chr1 manual_curation exon 33190263 33190420 . - . Parent=GSCOCT00016588001 | |
| 20367 chr1 manual_curation exon 33189872 33190184 . - . Parent=GSCOCT00016588001 | |
| 20368 chr1 manual_curation exon 33189296 33189574 . - . Parent=GSCOCT00016588001 | |
| 20369 chr1 manual_curation exon 33188246 33189049 . - . Parent=GSCOCT00016588001 | |
| 20370 chr1 manual_curation CDS 33192701 33192802 . - 0 Parent=GSCOCT00016588001 | |
| 20371 chr1 manual_curation CDS 33191633 33191898 . - 0 Parent=GSCOCT00016588001 | |
| 20372 chr1 manual_curation CDS 33190806 33191029 . - 2 Parent=GSCOCT00016588001 | |
| 20373 chr1 manual_curation CDS 33190263 33190420 . - 1 Parent=GSCOCT00016588001 | |
| 20374 chr1 manual_curation CDS 33189872 33190184 . - 0 Parent=GSCOCT00016588001 | |
| 20375 chr1 manual_curation CDS 33189296 33189574 . - 1 Parent=GSCOCT00016588001 | |
| 20376 chr1 manual_curation CDS 33188544 33189049 . - 1 Parent=GSCOCT00016588001 | |
| 20377 chr1 manual_curation gene 33198184 33205305 . - . ID=GSCOCG00016586001;Name=Cc01_g15240 | |
| 20378 chr1 manual_curation mRNA 33198184 33205305 . - . ID=GSCOCT00016586001;Parent=GSCOCG00016586001;Name=Cc01_g15240 | |
| 20379 chr1 manual_curation polypeptide 33198671 33204390 . - . ID=GSCOCP00016586001;Dbxref=InterPro:IPR002934,PFAM:PF01909,TAIR:AT3G51620.2,TAIR:AT3G56320.1,TAIR:AT3G61690.1,TrEMBL:D7LTW7,TrEMBL:F6GUC0,TrEMBL:F6GXX7;Derives_from=GSCOCT00016586001;Name=Cc01_g15240;Ontology_term=CC_evidence_code:ISS,GO:0016779,CC_EC_number:missing_EC_number,PRODUCT:Putative PAP/OAS1 substrate-binding domain superfamily,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016586001~ Putative PAP/OAS1 substrate-binding domain superfamily~ unknown_gene~ complete;original_location=join(4046801..4047073%2C4047926..4048111%2C4049002..4049094%2C4049238..4049420%2C4049504..4049606%2C4049759..4049944%2C4050729..4051846%2C4051948..4052333%2C4052460..4052520);owner=coffea | |
| 20380 chr1 manual_curation exon 33204118 33205305 . - . Parent=GSCOCT00016586001 | |
| 20381 chr1 manual_curation exon 33203080 33203265 . - . Parent=GSCOCT00016586001 | |
| 20382 chr1 manual_curation exon 33202097 33202189 . - . Parent=GSCOCT00016586001 | |
| 20383 chr1 manual_curation exon 33201771 33201953 . - . Parent=GSCOCT00016586001 | |
| 20384 chr1 manual_curation exon 33201585 33201687 . - . Parent=GSCOCT00016586001 | |
| 20385 chr1 manual_curation exon 33201247 33201432 . - . Parent=GSCOCT00016586001 | |
| 20386 chr1 manual_curation exon 33199345 33200462 . - . Parent=GSCOCT00016586001 | |
| 20387 chr1 manual_curation exon 33198858 33199243 . - . Parent=GSCOCT00016586001 | |
| 20388 chr1 manual_curation exon 33198184 33198731 . - . Parent=GSCOCT00016586001 | |
| 20389 chr1 manual_curation CDS 33204118 33204390 . - 0 Parent=GSCOCT00016586001 | |
| 20390 chr1 manual_curation CDS 33203080 33203265 . - 0 Parent=GSCOCT00016586001 | |
| 20391 chr1 manual_curation CDS 33202097 33202189 . - 0 Parent=GSCOCT00016586001 | |
| 20392 chr1 manual_curation CDS 33201771 33201953 . - 0 Parent=GSCOCT00016586001 | |
| 20393 chr1 manual_curation CDS 33201585 33201687 . - 0 Parent=GSCOCT00016586001 | |
| 20394 chr1 manual_curation CDS 33201247 33201432 . - 1 Parent=GSCOCT00016586001 | |
| 20395 chr1 manual_curation CDS 33199345 33200462 . - 1 Parent=GSCOCT00016586001 | |
| 20396 chr1 manual_curation CDS 33198858 33199243 . - 0 Parent=GSCOCT00016586001 | |
| 20397 chr1 manual_curation CDS 33198671 33198731 . - 2 Parent=GSCOCT00016586001 | |
| 20398 chr1 manual_curation gene 33213107 33216273 . - . ID=GSCOCG00016585001;Name=Cc01_g15250 | |
| 20399 chr1 manual_curation mRNA 33213107 33216273 . - . ID=GSCOCT00016585001;Parent=GSCOCG00016585001;Name=Cc01_g15250 | |
| 20400 chr1 manual_curation polypeptide 33213358 33216273 . - . ID=GSCOCP00016585001;Dbxref=InterPro:IPR000892,PANTHER:PTHR12538,PFAM:PF01283,PROSITE:PS00733,SwissProt:P49206,SwissProt:Q8LPJ7,SwissProt:Q9LYK9,TAIR:AT2G40510.1,TAIR:AT2G40590.1,TAIR:AT3G56340.1,TrEMBL:D7T4E4,TrEMBL:G7KEM5,TrEMBL:I1MBP8;Derives_from=GSCOCT00016585001;Name=Cc01_g15250;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:40S ribosomal protein S26-1,CC_functional_completeness:modules,CC_gene:RPS26A,CC_gene:RPS26B,CC_gene:RPS26C;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016585001~ 40S ribosomal protein S26-1~ RPS26A~ modules;original_location=join(4034918..4034978%2C4036029..4036096%2C4036212..4036304%2C4037008..4037092%2C4037198..4037331%2C4037768..4037833);owner=coffea | |
| 20401 chr1 manual_curation exon 33216213 33216273 . - . Parent=GSCOCT00016585001 | |
| 20402 chr1 manual_curation exon 33215095 33215162 . - . Parent=GSCOCT00016585001 | |
| 20403 chr1 manual_curation exon 33214887 33214979 . - . Parent=GSCOCT00016585001 | |
| 20404 chr1 manual_curation exon 33214099 33214183 . - . Parent=GSCOCT00016585001 | |
| 20405 chr1 manual_curation exon 33213860 33213993 . - . Parent=GSCOCT00016585001 | |
| 20406 chr1 manual_curation exon 33213107 33213423 . - . Parent=GSCOCT00016585001 | |
| 20407 chr1 manual_curation CDS 33216213 33216273 . - 0 Parent=GSCOCT00016585001 | |
| 20408 chr1 manual_curation CDS 33215095 33215162 . - 1 Parent=GSCOCT00016585001 | |
| 20409 chr1 manual_curation CDS 33214887 33214979 . - 0 Parent=GSCOCT00016585001 | |
| 20410 chr1 manual_curation CDS 33214099 33214183 . - 0 Parent=GSCOCT00016585001 | |
| 20411 chr1 manual_curation CDS 33213860 33213993 . - 1 Parent=GSCOCT00016585001 | |
| 20412 chr1 manual_curation CDS 33213358 33213423 . - 0 Parent=GSCOCT00016585001 | |
| 20413 chr1 manual_curation gene 33217631 33223508 . - . ID=GSCOCG00016584001;Name=Cc01_g15260 | |
| 20414 chr1 manual_curation mRNA 33217631 33223508 . - . ID=GSCOCT00016584001;Parent=GSCOCG00016584001;Name=Cc01_g15260 | |
| 20415 chr1 manual_curation polypeptide 33218124 33222449 . - . ID=GSCOCP00016584001;Dbxref=InterPro:IPR004853,PFAM:PF03151,SwissProt:Q1JQ66,SwissProt:Q8RXL8,SwissProt:Q9SRE4,TAIR:AT1G06890.1,TAIR:AT2G28315.1,TAIR:AT2G30460.1,TrEMBL:B9RX14,TrEMBL:D7KG75,TrEMBL:F4HNU3;Derives_from=GSCOCT00016584001;Name=Cc01_g15260;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterized membrane protein At1g06890,CC_functional_completeness:complete,CC_gene:At1g06890,CC_gene:UDP-GALT2,CC_gene:slc35e3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016584001~ Uncharacterized membrane protein At1g06890~ At1g06890~ complete;original_location=join(4028742..4028862%2C4030285..4030469%2C4030998..4031065%2C4031935..4032067%2C4032280..4032441%2C4032516..4032788%2C4032954..4033067);owner=coffea | |
| 20416 chr1 manual_curation exon 33223340 33223508 . - . Parent=GSCOCT00016584001 | |
| 20417 chr1 manual_curation exon 33222623 33222681 . - . Parent=GSCOCT00016584001 | |
| 20418 chr1 manual_curation exon 33222329 33222531 . - . Parent=GSCOCT00016584001 | |
| 20419 chr1 manual_curation exon 33220722 33220906 . - . Parent=GSCOCT00016584001 | |
| 20420 chr1 manual_curation exon 33220126 33220193 . - . Parent=GSCOCT00016584001 | |
| 20421 chr1 manual_curation exon 33219124 33219256 . - . Parent=GSCOCT00016584001 | |
| 20422 chr1 manual_curation exon 33218750 33218911 . - . Parent=GSCOCT00016584001 | |
| 20423 chr1 manual_curation exon 33218403 33218675 . - . Parent=GSCOCT00016584001 | |
| 20424 chr1 manual_curation exon 33217631 33218237 . - . Parent=GSCOCT00016584001 | |
| 20425 chr1 manual_curation CDS 33222329 33222449 . - 0 Parent=GSCOCT00016584001 | |
| 20426 chr1 manual_curation CDS 33220722 33220906 . - 1 Parent=GSCOCT00016584001 | |
| 20427 chr1 manual_curation CDS 33220126 33220193 . - 0 Parent=GSCOCT00016584001 | |
| 20428 chr1 manual_curation CDS 33219124 33219256 . - 2 Parent=GSCOCT00016584001 | |
| 20429 chr1 manual_curation CDS 33218750 33218911 . - 0 Parent=GSCOCT00016584001 | |
| 20430 chr1 manual_curation CDS 33218403 33218675 . - 0 Parent=GSCOCT00016584001 | |
| 20431 chr1 manual_curation CDS 33218124 33218237 . - 0 Parent=GSCOCT00016584001 | |
| 20432 chr1 manual_curation gene 33227408 33229233 . - . ID=GSCOCG00016583001;Name=Cc01_g15270 | |
| 20433 chr1 manual_curation mRNA 33227408 33229233 . - . ID=GSCOCT00016583001;Parent=GSCOCG00016583001;Name=Cc01_g15270 | |
| 20434 chr1 manual_curation polypeptide 33227863 33228879 . - . ID=GSCOCP00016583001;Dbxref=GENE3D:G3DSA:2.40.40.40,GENE3D:G3DSA:2.60.40.760,InterPro:IPR002963,InterPro:IPR005132,InterPro:IPR007112,InterPro:IPR007117,InterPro:IPR007118,InterPro:IPR009009,InterPro:IPR014734,PFAM:PF01357,PFAM:PF03330,PRINTS:PR01225,PRINTS:PR01226,PROFILE:PS50842,PROFILE:PS50843,SUPERFAMILY:SSF49590,SUPERFAMILY:SSF50685,SwissProt:O22874,SwissProt:Q0DHB7,SwissProt:Q40636,TAIR:AT1G69530.3,TAIR:AT2G40610.1,TAIR:AT5G05290.1,TrEMBL:D3J166,TrEMBL:G4XZW2,TrEMBL:G4XZX7;Derives_from=GSCOCT00016583001;Name=Cc01_g15270;Ontology_term=CC_evidence_code:ISS,GO:0005576,GO:0009664,CC_EC_number:missing_EC_number,PRODUCT:Expansin-A2,CC_functional_completeness:complete,CC_gene:EXPA2,CC_gene:EXPA8,CC_gene:EXPA4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016583001~ Expansin-A2~ EXPA2~ complete;original_location=join(4022312..4022459%2C4022568..4022880%2C4023025..4023328);owner=coffea | |
| 20435 chr1 manual_curation exon 33228732 33229233 . - . Parent=GSCOCT00016583001 | |
| 20436 chr1 manual_curation exon 33228311 33228623 . - . Parent=GSCOCT00016583001 | |
| 20437 chr1 manual_curation exon 33227408 33228166 . - . Parent=GSCOCT00016583001 | |
| 20438 chr1 manual_curation CDS 33228732 33228879 . - 0 Parent=GSCOCT00016583001 | |
| 20439 chr1 manual_curation CDS 33228311 33228623 . - 1 Parent=GSCOCT00016583001 | |
| 20440 chr1 manual_curation CDS 33227863 33228166 . - 2 Parent=GSCOCT00016583001 | |
| 20441 chr1 manual_curation gene 33231803 33244914 . - . ID=GSCOCG00016582001;Name=Cc01_g15280 | |
| 20442 chr1 manual_curation mRNA 33231803 33244914 . - . ID=GSCOCT00016582001;Parent=GSCOCG00016582001;Name=Cc01_g15280 | |
| 20443 chr1 manual_curation polypeptide 33232143 33244701 . - . ID=GSCOCP00016582001;Dbxref=GENE3D:G3DSA:3.30.830.10,InterPro:IPR001431,InterPro:IPR007863,InterPro:IPR011237,InterPro:IPR011249,InterPro:IPR011765,PFAM:PF00675,PFAM:PF05193,PROSITE:PS00143,SUPERFAMILY:SSF63411,SwissProt:P14735,SwissProt:P35559,SwissProt:Q24K02,TAIR:AT1G06900.1,TAIR:AT2G41790.1,TAIR:AT3G57470.2,TrEMBL:B9I6V5,TrEMBL:I1MZR2,TrEMBL:Q0WNY2;Derives_from=GSCOCT00016582001;Name=Cc01_g15280;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004222,GO:0006508,GO:0008270,GO:0046872,CC_EC_number:3.4.24.61,PRODUCT:Putative Insulin-degrading enzyme,CC_functional_completeness:complete,CC_gene:Ide,CC_gene:IDE;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016582001~ Putative Insulin-degrading enzyme~ Ide~ complete;original_location=join(4006490..4006807%2C4006928..4007003%2C4007647..4007693%2C4007851..4007963%2C4008537..4008610%2C4008726..4008821%2C4008912..4009031%2C4009599..4009832%2C4010486..4010634%2C4012336..4012492%2C4013342..4013494%2C4013840..4014219%2C4014335..4014484%2C4015619..4015801%2C4016769..4016972%2C4017076..4017182%2C4017444..4017597%2C4018050..4018171%2C4018805..4019048);owner=coffea | |
| 20444 chr1 manual_curation exon 33244384 33244914 . - . Parent=GSCOCT00016582001 | |
| 20445 chr1 manual_curation exon 33244188 33244263 . - . Parent=GSCOCT00016582001 | |
| 20446 chr1 manual_curation exon 33243498 33243544 . - . Parent=GSCOCT00016582001 | |
| 20447 chr1 manual_curation exon 33243228 33243340 . - . Parent=GSCOCT00016582001 | |
| 20448 chr1 manual_curation exon 33242581 33242654 . - . Parent=GSCOCT00016582001 | |
| 20449 chr1 manual_curation exon 33242370 33242465 . - . Parent=GSCOCT00016582001 | |
| 20450 chr1 manual_curation exon 33242160 33242279 . - . Parent=GSCOCT00016582001 | |
| 20451 chr1 manual_curation exon 33241359 33241592 . - . Parent=GSCOCT00016582001 | |
| 20452 chr1 manual_curation exon 33240557 33240705 . - . Parent=GSCOCT00016582001 | |
| 20453 chr1 manual_curation exon 33238699 33238855 . - . Parent=GSCOCT00016582001 | |
| 20454 chr1 manual_curation exon 33237697 33237849 . - . Parent=GSCOCT00016582001 | |
| 20455 chr1 manual_curation exon 33236972 33237351 . - . Parent=GSCOCT00016582001 | |
| 20456 chr1 manual_curation exon 33236707 33236856 . - . Parent=GSCOCT00016582001 | |
| 20457 chr1 manual_curation exon 33235390 33235572 . - . Parent=GSCOCT00016582001 | |
| 20458 chr1 manual_curation exon 33234219 33234422 . - . Parent=GSCOCT00016582001 | |
| 20459 chr1 manual_curation exon 33234009 33234115 . - . Parent=GSCOCT00016582001 | |
| 20460 chr1 manual_curation exon 33233594 33233747 . - . Parent=GSCOCT00016582001 | |
| 20461 chr1 manual_curation exon 33233020 33233141 . - . Parent=GSCOCT00016582001 | |
| 20462 chr1 manual_curation exon 33231803 33232386 . - . Parent=GSCOCT00016582001 | |
| 20463 chr1 manual_curation CDS 33244384 33244701 . - 0 Parent=GSCOCT00016582001 | |
| 20464 chr1 manual_curation CDS 33244188 33244263 . - 0 Parent=GSCOCT00016582001 | |
| 20465 chr1 manual_curation CDS 33243498 33243544 . - 1 Parent=GSCOCT00016582001 | |
| 20466 chr1 manual_curation CDS 33243228 33243340 . - 0 Parent=GSCOCT00016582001 | |
| 20467 chr1 manual_curation CDS 33242581 33242654 . - 2 Parent=GSCOCT00016582001 | |
| 20468 chr1 manual_curation CDS 33242370 33242465 . - 1 Parent=GSCOCT00016582001 | |
| 20469 chr1 manual_curation CDS 33242160 33242279 . - 1 Parent=GSCOCT00016582001 | |
| 20470 chr1 manual_curation CDS 33241359 33241592 . - 1 Parent=GSCOCT00016582001 | |
| 20471 chr1 manual_curation CDS 33240557 33240705 . - 1 Parent=GSCOCT00016582001 | |
| 20472 chr1 manual_curation CDS 33238699 33238855 . - 0 Parent=GSCOCT00016582001 | |
| 20473 chr1 manual_curation CDS 33237697 33237849 . - 1 Parent=GSCOCT00016582001 | |
| 20474 chr1 manual_curation CDS 33236972 33237351 . - 1 Parent=GSCOCT00016582001 | |
| 20475 chr1 manual_curation CDS 33236707 33236856 . - 0 Parent=GSCOCT00016582001 | |
| 20476 chr1 manual_curation CDS 33235390 33235572 . - 0 Parent=GSCOCT00016582001 | |
| 20477 chr1 manual_curation CDS 33234219 33234422 . - 0 Parent=GSCOCT00016582001 | |
| 20478 chr1 manual_curation CDS 33234009 33234115 . - 0 Parent=GSCOCT00016582001 | |
| 20479 chr1 manual_curation CDS 33233594 33233747 . - 2 Parent=GSCOCT00016582001 | |
| 20480 chr1 manual_curation CDS 33233020 33233141 . - 0 Parent=GSCOCT00016582001 | |
| 20481 chr1 manual_curation CDS 33232143 33232386 . - 2 Parent=GSCOCT00016582001 | |
| 20482 chr1 manual_curation gene 33248587 33252260 . + . ID=GSCOCG00016581001;Name=Cc01_g15290 | |
| 20483 chr1 manual_curation mRNA 33248587 33252260 . + . ID=GSCOCT00016581001;Parent=GSCOCG00016581001;Name=Cc01_g15290 | |
| 20484 chr1 manual_curation polypeptide 33248587 33251930 . + . ID=GSCOCP00016581001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001005,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR014778,InterPro:IPR017930,PFAM:PF00249,PROFILE:PS51294,SMART:SM00717,SUPERFAMILY:SSF46689,TAIR:AT1G06910.1,TAIR:AT1G15720.1,TAIR:AT5G58340.1,TrEMBL:A5AZN6,TrEMBL:B9RYJ5,TrEMBL:D7SJJ1;Derives_from=GSCOCT00016581001;Name=Cc01_g15290;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016581001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=complement(join(4001917..4002604%2C4001275..4001756%2C3999672..3999859%2C3999377..3999443%2C3999261..3999299));owner=coffea | |
| 20485 chr1 manual_curation exon 33251892 33252260 . + . Parent=GSCOCT00016581001 | |
| 20486 chr1 manual_curation exon 33251748 33251814 . + . Parent=GSCOCT00016581001 | |
| 20487 chr1 manual_curation exon 33251332 33251519 . + . Parent=GSCOCT00016581001 | |
| 20488 chr1 manual_curation exon 33249435 33249916 . + . Parent=GSCOCT00016581001 | |
| 20489 chr1 manual_curation exon 33248587 33249274 . + . Parent=GSCOCT00016581001 | |
| 20490 chr1 manual_curation CDS 33251892 33251930 . + 0 Parent=GSCOCT00016581001 | |
| 20491 chr1 manual_curation CDS 33251748 33251814 . + 2 Parent=GSCOCT00016581001 | |
| 20492 chr1 manual_curation CDS 33251332 33251519 . + 0 Parent=GSCOCT00016581001 | |
| 20493 chr1 manual_curation CDS 33249435 33249916 . + 1 Parent=GSCOCT00016581001 | |
| 20494 chr1 manual_curation CDS 33248587 33249274 . + 0 Parent=GSCOCT00016581001 | |
| 20495 chr1 manual_curation gene 33256438 33258429 . - . ID=GSCOCG00016580001;Name=Cc01_g15300 | |
| 20496 chr1 manual_curation mRNA 33256438 33258429 . - . ID=GSCOCT00016580001;Parent=GSCOCG00016580001;Name=Cc01_g15300 | |
| 20497 chr1 manual_curation polypeptide 33256438 33258429 . - . ID=GSCOCP00016580001;Dbxref=InterPro:IPR004827,InterPro:IPR011616,PFAM:PF00170,PROFILE:PS50217,SMART:SM00338,SwissProt:Q04088,SwissProt:Q69IL4,SwissProt:Q6S4P4,TAIR:AT1G06850.1,TAIR:AT2G31370.3,TAIR:AT2G40620.1,TrEMBL:B9I6X5,TrEMBL:B9INM1,TrEMBL:E5GB68;Derives_from=GSCOCT00016580001;Name=Cc01_g15300;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0043565,GO:0046983,CC_EC_number:missing_EC_number,PRODUCT:Putative B-zip DNA binding protein,CC_functional_completeness:fragment,CC_gene:RF2b,CC_gene:POSF21,CC_gene:RF2a;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016580001~ Putative B-zip DNA binding protein~ RF2b~ fragment;original_location=join(3992762..3993070%2C3993128..3993288%2C3993891..3994034%2C3994194..3994276%2C3994551..3994753);owner=coffea | |
| 20498 chr1 manual_curation exon 33258121 33258429 . - . Parent=GSCOCT00016580001 | |
| 20499 chr1 manual_curation exon 33257903 33258063 . - . Parent=GSCOCT00016580001 | |
| 20500 chr1 manual_curation exon 33257157 33257300 . - . Parent=GSCOCT00016580001 | |
| 20501 chr1 manual_curation exon 33256915 33256997 . - . Parent=GSCOCT00016580001 | |
| 20502 chr1 manual_curation exon 33256438 33256640 . - . Parent=GSCOCT00016580001 | |
| 20503 chr1 manual_curation CDS 33258121 33258429 . - 0 Parent=GSCOCT00016580001 | |
| 20504 chr1 manual_curation CDS 33257903 33258063 . - 0 Parent=GSCOCT00016580001 | |
| 20505 chr1 manual_curation CDS 33257157 33257300 . - 2 Parent=GSCOCT00016580001 | |
| 20506 chr1 manual_curation CDS 33256915 33256997 . - 2 Parent=GSCOCT00016580001 | |
| 20507 chr1 manual_curation CDS 33256438 33256640 . - 1 Parent=GSCOCT00016580001 | |
| 20508 chr1 manual_curation gene 33261175 33261687 . + . ID=GSCOCG00016578001;Name=Cc01_g15310 | |
| 20509 chr1 manual_curation mRNA 33261175 33261687 . + . ID=GSCOCT00016578001;Parent=GSCOCG00016578001;Name=Cc01_g15310 | |
| 20510 chr1 manual_curation polypeptide 33261175 33261687 . + . ID=GSCOCP00016578001;Dbxref=InterPro:IPR001841,InterPro:IPR018957,PFAM:PF00097,PROFILE:PS50089,SMART:SM00184,SwissProt:Q6NQG7,SwissProt:Q9FLC6,SwissProt:Q9SG96,TAIR:AT1G49230.1,TAIR:AT3G10910.1,TAIR:AT5G05280.1,TrEMBL:A5AZN8,TrEMBL:B9S4E7,TrEMBL:F6GUB5;Derives_from=GSCOCT00016578001;Name=Cc01_g15310;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:RING-H2 finger protein ATL73,CC_functional_completeness:complete,CC_gene:ATL73,CC_gene:ATL72,CC_gene:ATL78;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016578001~ RING-H2 finger protein ATL73~ ATL73~ complete;original_location=complement(3989504..3990016);owner=coffea | |
| 20511 chr1 manual_curation exon 33261175 33261687 . + . Parent=GSCOCT00016578001 | |
| 20512 chr1 manual_curation CDS 33261175 33261687 . + 0 Parent=GSCOCT00016578001 | |
| 20513 chr1 manual_curation gene 33263408 33265950 . - . ID=GSCOCG00016577001;Name=Cc01_g15320 | |
| 20514 chr1 manual_curation mRNA 33263408 33265950 . - . ID=GSCOCT00016577001;Parent=GSCOCG00016577001;Name=Cc01_g15320 | |
| 20515 chr1 manual_curation polypeptide 33263408 33265950 . - . ID=GSCOCP00016577001;Dbxref=TrEMBL:B9I6Y1,TrEMBL:B9INL9,TrEMBL:F6GUB4;Derives_from=GSCOCT00016577001;Name=Cc01_g15320;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016577001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=join(3985241..3985900%2C3986535..3986638%2C3987477..3987783);owner=coffea | |
| 20516 chr1 manual_curation exon 33265291 33265950 . - . Parent=GSCOCT00016577001 | |
| 20517 chr1 manual_curation exon 33264553 33264656 . - . Parent=GSCOCT00016577001 | |
| 20518 chr1 manual_curation exon 33263408 33263714 . - . Parent=GSCOCT00016577001 | |
| 20519 chr1 manual_curation CDS 33265291 33265950 . - 0 Parent=GSCOCT00016577001 | |
| 20520 chr1 manual_curation CDS 33264553 33264656 . - 0 Parent=GSCOCT00016577001 | |
| 20521 chr1 manual_curation CDS 33263408 33263714 . - 2 Parent=GSCOCT00016577001 | |
| 20522 chr1 manual_curation gene 33267399 33275733 . - . ID=GSCOCG00016576001;Name=Cc01_g15330 | |
| 20523 chr1 manual_curation mRNA 33267399 33275733 . - . ID=GSCOCT00016576001;Parent=GSCOCG00016576001;Name=Cc01_g15330 | |
| 20524 chr1 manual_curation polypeptide 33267710 33275145 . - . ID=GSCOCP00016576001;Dbxref=InterPro:IPR003340,InterPro:IPR011124,PFAM:PF02362,PFAM:PF07496,PROFILE:PS50863,PROFILE:PS51050,SwissProt:Q5CCK4,SwissProt:Q6Z3U3,SwissProt:Q8W4L5,TAIR:AT2G30470.1,TAIR:AT4G21550.1,TAIR:AT4G32010.1,TrEMBL:B9INL8,TrEMBL:B9SD76,TrEMBL:F6GUB3;Derives_from=GSCOCT00016576001;Name=Cc01_g15330;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative B3 domain-containing protein Os07g0679700,CC_functional_completeness:complete,CC_gene:Os07g0679700,CC_gene:VAL1,CC_gene:VAL2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016576001~ Putative B3 domain-containing protein Os07g0679700~ Os07g0679700~ complete;original_location=join(3976046..3976158%2C3977102..3977183%2C3977269..3977385%2C3978124..3978725%2C3978877..3978973%2C3979091..3979265%2C3979731..3979807%2C3979897..3979977%2C3980083..3980322%2C3980510..3980559%2C3981233..3981346%2C3981639..3981703%2C3982769..3983481);owner=coffea | |
| 20525 chr1 manual_curation exon 33275033 33275733 . - . Parent=GSCOCT00016576001 | |
| 20526 chr1 manual_curation exon 33274008 33274089 . - . Parent=GSCOCT00016576001 | |
| 20527 chr1 manual_curation exon 33273806 33273922 . - . Parent=GSCOCT00016576001 | |
| 20528 chr1 manual_curation exon 33272466 33273067 . - . Parent=GSCOCT00016576001 | |
| 20529 chr1 manual_curation exon 33272218 33272314 . - . Parent=GSCOCT00016576001 | |
| 20530 chr1 manual_curation exon 33271926 33272100 . - . Parent=GSCOCT00016576001 | |
| 20531 chr1 manual_curation exon 33271384 33271460 . - . Parent=GSCOCT00016576001 | |
| 20532 chr1 manual_curation exon 33271214 33271294 . - . Parent=GSCOCT00016576001 | |
| 20533 chr1 manual_curation exon 33270869 33271108 . - . Parent=GSCOCT00016576001 | |
| 20534 chr1 manual_curation exon 33270632 33270681 . - . Parent=GSCOCT00016576001 | |
| 20535 chr1 manual_curation exon 33269845 33269958 . - . Parent=GSCOCT00016576001 | |
| 20536 chr1 manual_curation exon 33269488 33269552 . - . Parent=GSCOCT00016576001 | |
| 20537 chr1 manual_curation exon 33267399 33268422 . - . Parent=GSCOCT00016576001 | |
| 20538 chr1 manual_curation CDS 33275033 33275145 . - 0 Parent=GSCOCT00016576001 | |
| 20539 chr1 manual_curation CDS 33274008 33274089 . - 2 Parent=GSCOCT00016576001 | |
| 20540 chr1 manual_curation CDS 33273806 33273922 . - 0 Parent=GSCOCT00016576001 | |
| 20541 chr1 manual_curation CDS 33272466 33273067 . - 0 Parent=GSCOCT00016576001 | |
| 20542 chr1 manual_curation CDS 33272218 33272314 . - 2 Parent=GSCOCT00016576001 | |
| 20543 chr1 manual_curation CDS 33271926 33272100 . - 0 Parent=GSCOCT00016576001 | |
| 20544 chr1 manual_curation CDS 33271384 33271460 . - 1 Parent=GSCOCT00016576001 | |
| 20545 chr1 manual_curation CDS 33271214 33271294 . - 0 Parent=GSCOCT00016576001 | |
| 20546 chr1 manual_curation CDS 33270869 33271108 . - 0 Parent=GSCOCT00016576001 | |
| 20547 chr1 manual_curation CDS 33270632 33270681 . - 0 Parent=GSCOCT00016576001 | |
| 20548 chr1 manual_curation CDS 33269845 33269958 . - 2 Parent=GSCOCT00016576001 | |
| 20549 chr1 manual_curation CDS 33269488 33269552 . - 2 Parent=GSCOCT00016576001 | |
| 20550 chr1 manual_curation CDS 33267710 33268422 . - 1 Parent=GSCOCT00016576001 | |
| 20551 chr1 manual_curation gene 33284224 33287126 . + . ID=GSCOCG00016575001;Name=Cc01_g15340 | |
| 20552 chr1 manual_curation mRNA 33284224 33287126 . + . ID=GSCOCT00016575001;Parent=GSCOCG00016575001;Name=Cc01_g15340 | |
| 20553 chr1 manual_curation polypeptide 33284793 33286976 . + . ID=GSCOCP00016575001;Dbxref=InterPro:IPR001789,InterPro:IPR011006,PFAM:PF00072,PROFILE:PS50110,SMART:SM00448,SUPERFAMILY:SSF52172,SwissProt:O80365,SwissProt:Q9FPR6,SwissProt:Q9SHC2,TAIR:AT2G40670.2,TAIR:AT2G41310.1,TAIR:AT3G56380.1,TrEMBL:B9IQ64,TrEMBL:E3Q1G8,TrEMBL:F6HC71;Derives_from=GSCOCT00016575001;Name=Cc01_g15340;Ontology_term=CC_evidence_code:ISS,GO:0000156,GO:0000160,CC_EC_number:missing_EC_number,PRODUCT:Two-component response regulator ARR17,CC_functional_completeness:complete,CC_gene:ARR17,CC_gene:ARR16,CC_gene:ARR8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016575001~ Two-component response regulator ARR17~ ARR17~ complete;original_location=complement(join(3966281..3966398%2C3965214..3965287%2C3964681..3964758%2C3964492..3964562%2C3964215..3964341));owner=coffea | |
| 20554 chr1 manual_curation exon 33286850 33287126 . + . Parent=GSCOCT00016575001 | |
| 20555 chr1 manual_curation exon 33286629 33286699 . + . Parent=GSCOCT00016575001 | |
| 20556 chr1 manual_curation exon 33286433 33286510 . + . Parent=GSCOCT00016575001 | |
| 20557 chr1 manual_curation exon 33285904 33285977 . + . Parent=GSCOCT00016575001 | |
| 20558 chr1 manual_curation exon 33284224 33284910 . + . Parent=GSCOCT00016575001 | |
| 20559 chr1 manual_curation CDS 33286850 33286976 . + 2 Parent=GSCOCT00016575001 | |
| 20560 chr1 manual_curation CDS 33286629 33286699 . + 0 Parent=GSCOCT00016575001 | |
| 20561 chr1 manual_curation CDS 33286433 33286510 . + 0 Parent=GSCOCT00016575001 | |
| 20562 chr1 manual_curation CDS 33285904 33285977 . + 1 Parent=GSCOCT00016575001 | |
| 20563 chr1 manual_curation CDS 33284793 33284910 . + 0 Parent=GSCOCT00016575001 | |
| 20564 chr1 manual_curation gene 33298820 33300420 . + . ID=GSCOCG00016573001;Name=Cc01_g15350 | |
| 20565 chr1 manual_curation mRNA 33298820 33300420 . + . ID=GSCOCT00016573001;Parent=GSCOCG00016573001;Name=Cc01_g15350 | |
| 20566 chr1 manual_curation polypeptide 33298940 33299917 . + . ID=GSCOCP00016573001;Dbxref=GENE3D:G3DSA:1.20.1050.10,GENE3D:G3DSA:3.40.30.10,InterPro:IPR004045,InterPro:IPR004046,InterPro:IPR010987,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR017933,PFAM:PF00043,PFAM:PF02798,PROFILE:PS50404,PROFILE:PS50405,SUPERFAMILY:SSF47616,SUPERFAMILY:SSF52833,SwissProt:P25317,SwissProt:P49332,SwissProt:P50471,TAIR:AT1G17180.1,TAIR:AT1G78370.1,TAIR:AT1G78380.1,TrEMBL:B9INL3,TrEMBL:D2X9R0,TrEMBL:D2X9R1;Derives_from=GSCOCT00016573001;Name=Cc01_g15350;Ontology_term=CC_evidence_code:ISS,CC_EC_number:4.4.1.5,PRODUCT:Probable glutathione S-transferase parA,CC_functional_completeness:complete,CC_gene:PARA,CC_gene:MSR-1,CC_gene:PARC;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016573001~ Probable glutathione S-transferase parA~ PARA~ complete;original_location=complement(join(3951928..3952251%2C3951274..3951612));owner=coffea | |
| 20567 chr1 manual_curation exon 33299579 33300420 . + . Parent=GSCOCT00016573001 | |
| 20568 chr1 manual_curation exon 33298820 33299263 . + . Parent=GSCOCT00016573001 | |
| 20569 chr1 manual_curation CDS 33299579 33299917 . + 0 Parent=GSCOCT00016573001 | |
| 20570 chr1 manual_curation CDS 33298940 33299263 . + 0 Parent=GSCOCT00016573001 | |
| 20571 chr1 manual_curation gene 33302371 33306360 . - . ID=GSCOCG00016571001;Name=Cc01_g15360 | |
| 20572 chr1 manual_curation mRNA 33302371 33306360 . - . ID=GSCOCT00016571001;Parent=GSCOCG00016571001;Name=Cc01_g15360 | |
| 20573 chr1 manual_curation polypeptide 33302670 33305477 . - . ID=GSCOCP00016571001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:O24312,SwissProt:Q43054,TAIR:AT1G74550.1,TAIR:AT2G30490.1,TAIR:AT2G40890.1;Derives_from=GSCOCT00016571001;Name=Cc01_g15360;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.11,PRODUCT:Trans-cinnamate 4-monooxygenase,CC_functional_completeness:fragment,CC_gene:CYP73A4,CC_gene:CYP73A16,CC_gene:CYP73A13;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016571001~ Trans-cinnamate 4-monooxygenase~ CYP73A4~ fragment;original_location=join(3945714..3945943%2C3946687..3946820%2C3947923..3948521);owner=coffea | |
| 20574 chr1 manual_curation exon 33305248 33306360 . - . Parent=GSCOCT00016571001 | |
| 20575 chr1 manual_curation exon 33304371 33304504 . - . Parent=GSCOCT00016571001 | |
| 20576 chr1 manual_curation exon 33302371 33303268 . - . Parent=GSCOCT00016571001 | |
| 20577 chr1 manual_curation CDS 33305248 33305477 . - 0 Parent=GSCOCT00016571001 | |
| 20578 chr1 manual_curation CDS 33304371 33304504 . - 2 Parent=GSCOCT00016571001 | |
| 20579 chr1 manual_curation CDS 33302670 33303268 . - 1 Parent=GSCOCT00016571001 | |
| 20580 chr1 manual_curation gene 33338320 33339772 . - . ID=GSCOCG00016570001;Name=Cc01_g15370 | |
| 20581 chr1 manual_curation mRNA 33338320 33339772 . - . ID=GSCOCT00016570001;Parent=GSCOCG00016570001;Name=Cc01_g15370 | |
| 20582 chr1 manual_curation polypeptide 33338320 33339216 . - . ID=GSCOCP00016570001;Dbxref=GENE3D:G3DSA:3.30.730.10,InterPro:IPR001471,InterPro:IPR016177,PFAM:PF00847,PRINTS:PR00367,PROFILE:PS51032,SMART:SM00380,SUPERFAMILY:SSF54171,SwissProt:O04682,SwissProt:Q9SUE3,SwissProt:Q9SUQ2,TAIR:AT4G23750.1,TAIR:AT4G27950.1,TAIR:AT5G53290.1,TrEMBL:B9I767,TrEMBL:B9INK5,TrEMBL:F6GU77;Derives_from=GSCOCT00016570001;Name=Cc01_g15370;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,CC_EC_number:missing_EC_number,PRODUCT:Putative Pathogenesis-related genes transcriptional activator PTI6,CC_functional_completeness:complete,CC_gene:PTI6,CC_gene:CRF4,CC_gene:CRF2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016570001~ Putative Pathogenesis-related genes transcriptional activator PTI6~ PTI6~ complete;original_location=3911975..3912871;owner=coffea | |
| 20583 chr1 manual_curation exon 33338320 33339772 . - . Parent=GSCOCT00016570001 | |
| 20584 chr1 manual_curation CDS 33338320 33339216 . - 0 Parent=GSCOCT00016570001 | |
| 20585 chr1 manual_curation gene 33344571 33348012 . - . ID=GSCOCG00016569001;Name=Cc01_g15380 | |
| 20586 chr1 manual_curation mRNA 33344571 33348012 . - . ID=GSCOCT00016569001;Parent=GSCOCG00016569001;Name=Cc01_g15380 | |
| 20587 chr1 manual_curation polypeptide 33345838 33347761 . - . ID=GSCOCP00016569001;Dbxref=GENE3D:G3DSA:3.10.110.10,InterPro:IPR000608,InterPro:IPR016135,PFAM:PF00179,PROFILE:PS50127,PROSITE:PS00183,SMART:SM00212,SUPERFAMILY:SSF54495;Derives_from=GSCOCT00016569001;Name=Cc01_g15380;Ontology_term=CC_evidence_code:ISS,GO:0019787,GO:0043687,GO:0051246,CC_EC_number:6.3.2.19,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:UBC28,CC_gene:UBC8,CC_gene:UBC5B,CC_gene:UBC10,CC_gene:UBC9,CC_gene:UBC11,CC_gene:UBC30;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016569001~ Hypothetical protein~ UBC28~ missing_functional_completeness;original_location=join(3903430..3903516%2C3904196..3904300%2C3905210..3905353);owner=coffea | |
| 20588 chr1 manual_curation exon 33347675 33348012 . - . Parent=GSCOCT00016569001 | |
| 20589 chr1 manual_curation exon 33346891 33346995 . - . Parent=GSCOCT00016569001 | |
| 20590 chr1 manual_curation exon 33344571 33345981 . - . Parent=GSCOCT00016569001 | |
| 20591 chr1 manual_curation CDS 33347675 33347761 . - 0 Parent=GSCOCT00016569001 | |
| 20592 chr1 manual_curation CDS 33346891 33346995 . - 0 Parent=GSCOCT00016569001 | |
| 20593 chr1 manual_curation CDS 33345838 33345981 . - 0 Parent=GSCOCT00016569001 | |
| 20594 chr1 manual_curation gene 33353482 33355129 . - . ID=GSCOCG00016566001;Name=Cc01_g15390 | |
| 20595 chr1 manual_curation mRNA 33353482 33355129 . - . ID=GSCOCT00016566001;Parent=GSCOCG00016566001;Name=Cc01_g15390 | |
| 20596 chr1 manual_curation polypeptide 33353794 33355129 . - . ID=GSCOCP00016566001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR011009,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:O48788,SwissProt:Q9C9Y8,SwissProt:Q9LVM0,TAIR:AT2G26730.1,TAIR:AT3G08680.1,TAIR:AT5G58300.1,TrEMBL:B9T6G8,TrEMBL:F6GU76,TrEMBL:G7IV47;Derives_from=GSCOCT00016566001;Name=Cc01_g15390;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Probable inactive receptor kinase At5g58300,CC_functional_completeness:fragment,CC_gene:At5g58300,CC_gene:At3g08680,CC_gene:At2g26730;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016566001~ Probable inactive receptor kinase At5g58300~ At5g58300~ fragment;original_location=join(3896062..3896191%2C3896769..3897397);owner=coffea | |
| 20597 chr1 manual_curation exon 33355000 33355129 . - . Parent=GSCOCT00016566001 | |
| 20598 chr1 manual_curation exon 33353482 33354422 . - . Parent=GSCOCT00016566001 | |
| 20599 chr1 manual_curation CDS 33355000 33355129 . - 0 Parent=GSCOCT00016566001 | |
| 20600 chr1 manual_curation CDS 33353794 33354422 . - 1 Parent=GSCOCT00016566001 | |
| 20601 chr1 manual_curation gene 33364280 33369861 . - . ID=GSCOCG00016564001;Name=Cc01_g15400 | |
| 20602 chr1 manual_curation mRNA 33364280 33369861 . - . ID=GSCOCT00016564001;Parent=GSCOCG00016564001;Name=Cc01_g15400 | |
| 20603 chr1 manual_curation polypeptide 33364533 33368700 . - . ID=GSCOCP00016564001;Dbxref=InterPro:IPR003593,InterPro:IPR003959,InterPro:IPR003960,InterPro:IPR005937,PFAM:PF00004,PROSITE:PS00674,SMART:SM00382,SwissProt:P34123,SwissProt:P43686,SwissProt:P46507,SwissProt:Q3T030,SwissProt:Q4R7L3,TAIR:AT2G20140.1,TAIR:AT4G29040.1,TIGRFAMs:TIGR01242;Derives_from=GSCOCT00016564001;Name=Cc01_g15400;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0005737,GO:0016787,GO:0017111,GO:0030163,CC_EC_number:3.6.4.3,CC_EC_number:3.6.4.3,PRODUCT:26S protease regulatory subunit 6B,CC_functional_completeness:fragment,CC_gene:RPT3,CC_gene:psmC4,CC_gene:PSMC4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016564001~ 26S protease regulatory subunit 6B~ RPT3~ fragment;original_location=join(3882491..3882709%2C3884371..3884601%2C3885555..3885713%2C3885940..3886092%2C3886251..3886334%2C3886524..3886658);owner=coffea | |
| 20604 chr1 manual_curation exon 33368482 33369861 . - . Parent=GSCOCT00016564001 | |
| 20605 chr1 manual_curation exon 33366590 33366820 . - . Parent=GSCOCT00016564001 | |
| 20606 chr1 manual_curation exon 33365478 33365636 . - . Parent=GSCOCT00016564001 | |
| 20607 chr1 manual_curation exon 33365099 33365251 . - . Parent=GSCOCT00016564001 | |
| 20608 chr1 manual_curation exon 33364857 33364940 . - . Parent=GSCOCT00016564001 | |
| 20609 chr1 manual_curation exon 33364280 33364667 . - . Parent=GSCOCT00016564001 | |
| 20610 chr1 manual_curation CDS 33368482 33368700 . - 0 Parent=GSCOCT00016564001 | |
| 20611 chr1 manual_curation CDS 33366590 33366820 . - 0 Parent=GSCOCT00016564001 | |
| 20612 chr1 manual_curation CDS 33365478 33365636 . - 0 Parent=GSCOCT00016564001 | |
| 20613 chr1 manual_curation CDS 33365099 33365251 . - 0 Parent=GSCOCT00016564001 | |
| 20614 chr1 manual_curation CDS 33364857 33364940 . - 0 Parent=GSCOCT00016564001 | |
| 20615 chr1 manual_curation CDS 33364533 33364667 . - 0 Parent=GSCOCT00016564001 | |
| 20616 chr1 manual_curation gene 33373232 33375872 . - . ID=GSCOCG00016563001;Name=Cc01_g15410 | |
| 20617 chr1 manual_curation mRNA 33373232 33375872 . - . ID=GSCOCT00016563001;Parent=GSCOCG00016563001;Name=Cc01_g15410 | |
| 20618 chr1 manual_curation polypeptide 33373498 33375777 . - . ID=GSCOCP00016563001;Dbxref=GENE3D:G3DSA:3.30.710.10,InterPro:IPR000210,InterPro:IPR004249,InterPro:IPR011333,InterPro:IPR013069,PFAM:PF00651,PFAM:PF03000,PROFILE:PS50097,SMART:SM00225,SUPERFAMILY:SSF54695,SwissProt:Q66GP0,SwissProt:Q682S0,SwissProt:Q9FKB6,TAIR:AT2G30520.1,TAIR:AT5G48800.1,TAIR:AT5G67385.1,TrEMBL:D9ZIQ4,TrEMBL:D9ZIQ5,TrEMBL:F6GU74;Derives_from=GSCOCT00016563001;Name=Cc01_g15410;Ontology_term=CC_evidence_code:ISS,GO:0004871,GO:0005515,GO:0009416,CC_EC_number:missing_EC_number,PRODUCT:Root phototropism protein 2,CC_functional_completeness:complete,CC_gene:RPT2,CC_gene:At5g67385,CC_gene:At5g48800;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016563001~ Root phototropism protein 2~ RPT2~ complete;original_location=join(3875414..3875478%2C3875604..3875673%2C3875786..3876163%2C3876375..3877100%2C3877211..3877693);owner=coffea | |
| 20619 chr1 manual_curation exon 33375713 33375872 . - . Parent=GSCOCT00016563001 | |
| 20620 chr1 manual_curation exon 33375518 33375587 . - . Parent=GSCOCT00016563001 | |
| 20621 chr1 manual_curation exon 33375028 33375405 . - . Parent=GSCOCT00016563001 | |
| 20622 chr1 manual_curation exon 33374091 33374816 . - . Parent=GSCOCT00016563001 | |
| 20623 chr1 manual_curation exon 33373232 33373980 . - . Parent=GSCOCT00016563001 | |
| 20624 chr1 manual_curation CDS 33375713 33375777 . - 0 Parent=GSCOCT00016563001 | |
| 20625 chr1 manual_curation CDS 33375518 33375587 . - 2 Parent=GSCOCT00016563001 | |
| 20626 chr1 manual_curation CDS 33375028 33375405 . - 0 Parent=GSCOCT00016563001 | |
| 20627 chr1 manual_curation CDS 33374091 33374816 . - 0 Parent=GSCOCT00016563001 | |
| 20628 chr1 manual_curation CDS 33373498 33373980 . - 0 Parent=GSCOCT00016563001 | |
| 20629 chr1 manual_curation gene 33382463 33393238 . + . ID=GSCOCG00016562001;Name=Cc01_g15420 | |
| 20630 chr1 manual_curation mRNA 33382463 33393238 . + . ID=GSCOCT00016562001;Parent=GSCOCG00016562001;Name=Cc01_g15420 | |
| 20631 chr1 manual_curation polypeptide 33383088 33393085 . + . ID=GSCOCP00016562001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017441,InterPro:IPR020635,PFAM:PF00560,PFAM:PF07714,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:C0LGD7,SwissProt:C0LGU1,SwissProt:Q9LFG1,TAIR:AT1G06840.1,TAIR:AT5G01950.1,TAIR:AT5G37450.1,TrEMBL:F6GU73,TrEMBL:G7IV56,TrEMBL:I1MZN5;Derives_from=GSCOCT00016562001;Name=Cc01_g15420;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Probable LRR receptor-like serine/threonine-protein kinase At1g06840,CC_functional_completeness:complete,CC_gene:At1g06840,CC_gene:At5g37450,CC_gene:At3g53590;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016562001~ Probable LRR receptor-like serine/threonine-protein kinase At1g06840~ At1g06840~ complete;original_location=complement(join(3867998..3868103%2C3867032..3867182%2C3866521..3866592%2C3866264..3866335%2C3865834..3865977%2C3865583..3865654%2C3865435..3865506%2C3864373..3864447%2C3864089..3864157%2C3863842..3863910%2C3863619..3863690%2C3863366..3863452%2C3863119..3863187%2C3862445..3862950%2C3861383..3861541%2C3860517..3860800%2C3859908..3859959%2C3859417..3859667%2C3859023..3859157%2C3858106..3858456));owner=coffea | |
| 20632 chr1 manual_curation exon 33392735 33393238 . + . Parent=GSCOCT00016562001 | |
| 20633 chr1 manual_curation exon 33392034 33392168 . + . Parent=GSCOCT00016562001 | |
| 20634 chr1 manual_curation exon 33391524 33391774 . + . Parent=GSCOCT00016562001 | |
| 20635 chr1 manual_curation exon 33391232 33391283 . + . Parent=GSCOCT00016562001 | |
| 20636 chr1 manual_curation exon 33390391 33390674 . + . Parent=GSCOCT00016562001 | |
| 20637 chr1 manual_curation exon 33389650 33389808 . + . Parent=GSCOCT00016562001 | |
| 20638 chr1 manual_curation exon 33388241 33388746 . + . Parent=GSCOCT00016562001 | |
| 20639 chr1 manual_curation exon 33388004 33388072 . + . Parent=GSCOCT00016562001 | |
| 20640 chr1 manual_curation exon 33387739 33387825 . + . Parent=GSCOCT00016562001 | |
| 20641 chr1 manual_curation exon 33387501 33387572 . + . Parent=GSCOCT00016562001 | |
| 20642 chr1 manual_curation exon 33387281 33387349 . + . Parent=GSCOCT00016562001 | |
| 20643 chr1 manual_curation exon 33387034 33387102 . + . Parent=GSCOCT00016562001 | |
| 20644 chr1 manual_curation exon 33386744 33386818 . + . Parent=GSCOCT00016562001 | |
| 20645 chr1 manual_curation exon 33385685 33385756 . + . Parent=GSCOCT00016562001 | |
| 20646 chr1 manual_curation exon 33385537 33385608 . + . Parent=GSCOCT00016562001 | |
| 20647 chr1 manual_curation exon 33385214 33385357 . + . Parent=GSCOCT00016562001 | |
| 20648 chr1 manual_curation exon 33384856 33384927 . + . Parent=GSCOCT00016562001 | |
| 20649 chr1 manual_curation exon 33384599 33384670 . + . Parent=GSCOCT00016562001 | |
| 20650 chr1 manual_curation exon 33384009 33384159 . + . Parent=GSCOCT00016562001 | |
| 20651 chr1 manual_curation exon 33382463 33383193 . + . Parent=GSCOCT00016562001 | |
| 20652 chr1 manual_curation CDS 33392735 33393085 . + 0 Parent=GSCOCT00016562001 | |
| 20653 chr1 manual_curation CDS 33392034 33392168 . + 0 Parent=GSCOCT00016562001 | |
| 20654 chr1 manual_curation CDS 33391524 33391774 . + 1 Parent=GSCOCT00016562001 | |
| 20655 chr1 manual_curation CDS 33391232 33391283 . + 0 Parent=GSCOCT00016562001 | |
| 20656 chr1 manual_curation CDS 33390391 33390674 . + 1 Parent=GSCOCT00016562001 | |
| 20657 chr1 manual_curation CDS 33389650 33389808 . + 1 Parent=GSCOCT00016562001 | |
| 20658 chr1 manual_curation CDS 33388241 33388746 . + 2 Parent=GSCOCT00016562001 | |
| 20659 chr1 manual_curation CDS 33388004 33388072 . + 2 Parent=GSCOCT00016562001 | |
| 20660 chr1 manual_curation CDS 33387739 33387825 . + 2 Parent=GSCOCT00016562001 | |
| 20661 chr1 manual_curation CDS 33387501 33387572 . + 2 Parent=GSCOCT00016562001 | |
| 20662 chr1 manual_curation CDS 33387281 33387349 . + 2 Parent=GSCOCT00016562001 | |
| 20663 chr1 manual_curation CDS 33387034 33387102 . + 2 Parent=GSCOCT00016562001 | |
| 20664 chr1 manual_curation CDS 33386744 33386818 . + 2 Parent=GSCOCT00016562001 | |
| 20665 chr1 manual_curation CDS 33385685 33385756 . + 2 Parent=GSCOCT00016562001 | |
| 20666 chr1 manual_curation CDS 33385537 33385608 . + 2 Parent=GSCOCT00016562001 | |
| 20667 chr1 manual_curation CDS 33385214 33385357 . + 2 Parent=GSCOCT00016562001 | |
| 20668 chr1 manual_curation CDS 33384856 33384927 . + 2 Parent=GSCOCT00016562001 | |
| 20669 chr1 manual_curation CDS 33384599 33384670 . + 2 Parent=GSCOCT00016562001 | |
| 20670 chr1 manual_curation CDS 33384009 33384159 . + 1 Parent=GSCOCT00016562001 | |
| 20671 chr1 manual_curation CDS 33383088 33383193 . + 0 Parent=GSCOCT00016562001 | |
| 20672 chr1 manual_curation gene 33395254 33397586 . + . ID=GSCOCG00016561001;Name=Cc01_g15430 | |
| 20673 chr1 manual_curation mRNA 33395254 33397586 . + . ID=GSCOCT00016561001;Parent=GSCOCG00016561001;Name=Cc01_g15430 | |
| 20674 chr1 manual_curation polypeptide 33395354 33397367 . + . ID=GSCOCP00016561001;Dbxref=InterPro:IPR001197,InterPro:IPR016180,InterPro:IPR018255,PANTHER:PTHR11726,PFAM:PF00252,PIR:PIRSF005590,PROSITE:PS01257,SUPERFAMILY:SSF54686,SwissProt:P93847,SwissProt:Q9M5M7,SwissProt:Q9SPB3,TAIR:AT1G14320.1,TAIR:AT1G26910.1,TAIR:AT1G66580.1,TIGRFAMs:TIGR00279,TrEMBL:A9P8W6,TrEMBL:A9PGG5,TrEMBL:B3TLM0,TrEMBL:B9SED8,TrEMBL:C6SVF4,TrEMBL:C6SVX5;Derives_from=GSCOCT00016561001;Name=Cc01_g15430;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:60S ribosomal protein L10,CC_functional_completeness:complete,CC_gene:RPL10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016561001~ 60S ribosomal protein L10~ RPL10~ complete;original_location=complement(join(3855828..3855837%2C3854494..3854995%2C3854013..3854094%2C3853824..3853892));owner=coffea | |
| 20675 chr1 manual_curation exon 33397299 33397586 . + . Parent=GSCOCT00016561001 | |
| 20676 chr1 manual_curation exon 33397097 33397178 . + . Parent=GSCOCT00016561001 | |
| 20677 chr1 manual_curation exon 33396196 33396697 . + . Parent=GSCOCT00016561001 | |
| 20678 chr1 manual_curation exon 33395254 33395363 . + . Parent=GSCOCT00016561001 | |
| 20679 chr1 manual_curation CDS 33397299 33397367 . + 0 Parent=GSCOCT00016561001 | |
| 20680 chr1 manual_curation CDS 33397097 33397178 . + 2 Parent=GSCOCT00016561001 | |
| 20681 chr1 manual_curation CDS 33396196 33396697 . + 1 Parent=GSCOCT00016561001 | |
| 20682 chr1 manual_curation CDS 33395354 33395363 . + 0 Parent=GSCOCT00016561001 | |
| 20683 chr1 manual_curation gene 33398761 33401895 . - . ID=GSCOCG00016560001;Name=Cc01_g15440 | |
| 20684 chr1 manual_curation mRNA 33398761 33401895 . - . ID=GSCOCT00016560001;Parent=GSCOCG00016560001;Name=Cc01_g15440 | |
| 20685 chr1 manual_curation polypeptide 33399095 33401309 . - . ID=GSCOCP00016560001;Dbxref=InterPro:IPR003340,PFAM:PF02362,PROFILE:PS50863,SwissProt:Q1G3M3,SwissProt:Q5KQI4,SwissProt:Q9FHB2,TAIR:AT3G19184.1,TAIR:AT5G42700.1,TAIR:AT5G58280.1,TrEMBL:A5ADM3,TrEMBL:F6GU71,TrEMBL:G7IMD4;Derives_from=GSCOCT00016560001;Name=Cc01_g15440;Ontology_term=CC_evidence_code:ISS,GO:0003677,CC_EC_number:missing_EC_number,PRODUCT:Putative B3 domain-containing protein At3g19184,CC_functional_completeness:complete,CC_gene:At5g58280,CC_gene:Os05g0481400,CC_gene:At3g19184;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016560001~ Putative B3 domain-containing protein At3g19184~ At5g58280~ complete;original_location=join(3849882..3849959%2C3850302..3850367%2C3850461..3850556%2C3850985..3851043%2C3851124..3851283%2C3851410..3851616%2C3851911..3852096);owner=coffea | |
| 20686 chr1 manual_curation exon 33401822 33401895 . - . Parent=GSCOCT00016560001 | |
| 20687 chr1 manual_curation exon 33401232 33401374 . - . Parent=GSCOCT00016560001 | |
| 20688 chr1 manual_curation exon 33400824 33400889 . - . Parent=GSCOCT00016560001 | |
| 20689 chr1 manual_curation exon 33400635 33400730 . - . Parent=GSCOCT00016560001 | |
| 20690 chr1 manual_curation exon 33400148 33400206 . - . Parent=GSCOCT00016560001 | |
| 20691 chr1 manual_curation exon 33399908 33400067 . - . Parent=GSCOCT00016560001 | |
| 20692 chr1 manual_curation exon 33399575 33399781 . - . Parent=GSCOCT00016560001 | |
| 20693 chr1 manual_curation exon 33398761 33399280 . - . Parent=GSCOCT00016560001 | |
| 20694 chr1 manual_curation CDS 33401232 33401309 . - 0 Parent=GSCOCT00016560001 | |
| 20695 chr1 manual_curation CDS 33400824 33400889 . - 0 Parent=GSCOCT00016560001 | |
| 20696 chr1 manual_curation CDS 33400635 33400730 . - 0 Parent=GSCOCT00016560001 | |
| 20697 chr1 manual_curation CDS 33400148 33400206 . - 0 Parent=GSCOCT00016560001 | |
| 20698 chr1 manual_curation CDS 33399908 33400067 . - 2 Parent=GSCOCT00016560001 | |
| 20699 chr1 manual_curation CDS 33399575 33399781 . - 0 Parent=GSCOCT00016560001 | |
| 20700 chr1 manual_curation CDS 33399095 33399280 . - 0 Parent=GSCOCT00016560001 | |
| 20701 chr1 manual_curation gene 33404913 33406031 . + . ID=GSCOCG00016559001;Name=Cc01_g15450 | |
| 20702 chr1 manual_curation mRNA 33404913 33406031 . + . ID=GSCOCT00016559001;Parent=GSCOCG00016559001;Name=Cc01_g15450 | |
| 20703 chr1 manual_curation polypeptide 33404913 33406031 . + . ID=GSCOCP00016559001;Dbxref=GENE3D:G3DSA:3.60.40.10,InterPro:IPR001932,InterPro:IPR010822,PFAM:PF07228,SMART:SM00331,SMART:SM00332,SUPERFAMILY:SSF81606,SwissProt:Q6H7J3,SwissProt:Q9LVQ8,SwissProt:Q9SUK9,TAIR:AT4G16580.1,TAIR:AT4G33500.1,TAIR:AT5G66720.1,TrEMBL:B1N660,TrEMBL:B9SG89,TrEMBL:F6HLN7;Derives_from=GSCOCT00016559001;Name=Cc01_g15450;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004721,CC_EC_number:missing_EC_number,PRODUCT:Putative protein phosphatase 2C 24,CC_functional_completeness:complete,CC_gene:At5g66720,CC_gene:At4g16580,CC_gene:Os02g0633900;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016559001~ Putative protein phosphatase 2C 24~ At5g66720~ complete;original_location=complement(3845160..3846278);owner=coffea | |
| 20704 chr1 manual_curation exon 33404913 33406031 . + . Parent=GSCOCT00016559001 | |
| 20705 chr1 manual_curation CDS 33404913 33406031 . + 0 Parent=GSCOCT00016559001 | |
| 20706 chr1 manual_curation gene 33406209 33409546 . - . ID=GSCOCG00016558001;Name=Cc01_g15460 | |
| 20707 chr1 manual_curation mRNA 33406209 33409546 . - . ID=GSCOCT00016558001;Parent=GSCOCG00016558001;Name=Cc01_g15460 | |
| 20708 chr1 manual_curation polypeptide 33406733 33409546 . - . ID=GSCOCP00016558001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:B9X287,SwissProt:O48786,SwissProt:Q9FF18,TAIR:AT2G26710.1,TAIR:AT5G24900.1,TAIR:AT5G24910.1,TrEMBL:B9I787,TrEMBL:F6GVZ6,TrEMBL:F6HWD8;Derives_from=GSCOCT00016558001;Name=Cc01_g15460;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.3.3.9,PRODUCT:Putative Cytochrome P450 734A1,CC_functional_completeness:complete,CC_gene:CYP734A1,CC_gene:CYP735A1,CC_gene:CYP734A6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016558001~ Putative Cytochrome P450 734A1~ CYP734A1~ complete;original_location=join(3841645..3841907%2C3841981..3842123%2C3842666..3842745%2C3842889..3843136%2C3843585..3843933%2C3844042..3844458);owner=coffea | |
| 20709 chr1 manual_curation exon 33409284 33409546 . - . Parent=GSCOCT00016558001 | |
| 20710 chr1 manual_curation exon 33409068 33409210 . - . Parent=GSCOCT00016558001 | |
| 20711 chr1 manual_curation exon 33408446 33408525 . - . Parent=GSCOCT00016558001 | |
| 20712 chr1 manual_curation exon 33408055 33408302 . - . Parent=GSCOCT00016558001 | |
| 20713 chr1 manual_curation exon 33407258 33407606 . - . Parent=GSCOCT00016558001 | |
| 20714 chr1 manual_curation exon 33406209 33407149 . - . Parent=GSCOCT00016558001 | |
| 20715 chr1 manual_curation CDS 33409284 33409546 . - 0 Parent=GSCOCT00016558001 | |
| 20716 chr1 manual_curation CDS 33409068 33409210 . - 2 Parent=GSCOCT00016558001 | |
| 20717 chr1 manual_curation CDS 33408446 33408525 . - 1 Parent=GSCOCT00016558001 | |
| 20718 chr1 manual_curation CDS 33408055 33408302 . - 0 Parent=GSCOCT00016558001 | |
| 20719 chr1 manual_curation CDS 33407258 33407606 . - 2 Parent=GSCOCT00016558001 | |
| 20720 chr1 manual_curation CDS 33406733 33407149 . - 0 Parent=GSCOCT00016558001 | |
| 20721 chr1 manual_curation gene 33411943 33414824 . - . ID=GSCOCG00016557001;Name=Cc01_g15470 | |
| 20722 chr1 manual_curation mRNA 33411943 33414824 . - . ID=GSCOCT00016557001;Parent=GSCOCG00016557001;Name=Cc01_g15470 | |
| 20723 chr1 manual_curation polypeptide 33412190 33414677 . - . ID=GSCOCP00016557001;Dbxref=InterPro:IPR020101,PFAM:PF10890,PRODOM:PD056240,SwissProt:P46269,TAIR:AT3G10860.1,TAIR:AT5G05370.1,TrEMBL:B8B3G4,TrEMBL:I1H0J1,TrEMBL:Q9LDS7;Derives_from=GSCOCT00016557001;Name=Cc01_g15470;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Cytochrome b-c1 complex subunit 8,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016557001~ Cytochrome b-c1 complex subunit 8~ unknown_gene~ complete;original_location=join(3836514..3836683%2C3838953..3839001);owner=coffea | |
| 20724 chr1 manual_curation exon 33414508 33414824 . - . Parent=GSCOCT00016557001 | |
| 20725 chr1 manual_curation exon 33411943 33412238 . - . Parent=GSCOCT00016557001 | |
| 20726 chr1 manual_curation CDS 33414508 33414677 . - 0 Parent=GSCOCT00016557001 | |
| 20727 chr1 manual_curation CDS 33412190 33412238 . - 2 Parent=GSCOCT00016557001 | |
| 20728 chr1 manual_curation gene 33418389 33422769 . - . ID=GSCOCG00016556001;Name=Cc01_g15480 | |
| 20729 chr1 manual_curation mRNA 33418389 33422769 . - . ID=GSCOCT00016556001;Parent=GSCOCG00016556001;Name=Cc01_g15480 | |
| 20730 chr1 manual_curation polypeptide 33418839 33422515 . - . ID=GSCOCP00016556001;Dbxref=InterPro:IPR004087,SMART:SM00322,SwissProt:Q75GR5,SwissProt:Q8GYR4,SwissProt:Q9ZVI3,TAIR:AT2G38610.1,TAIR:AT3G08620.1,TAIR:AT5G56140.1,TrEMBL:A5BIR0,TrEMBL:D7SJG9,TrEMBL:I1N3C0;Derives_from=GSCOCT00016556001;Name=Cc01_g15480;Ontology_term=CC_evidence_code:ISS,GO:0003723,CC_EC_number:missing_EC_number,PRODUCT:KH domain-containing protein At2g38610,CC_functional_completeness:complete,CC_gene:At2g38610,CC_gene:At3g08620,CC_gene:SPIN1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016556001~ KH domain-containing protein At2g38610~ At2g38610~ complete;original_location=join(3828676..3828761%2C3828881..3828969%2C3830087..3830241%2C3830413..3830529%2C3830660..3830776%2C3830975..3831118%2C3832206..3832352);owner=coffea | |
| 20731 chr1 manual_curation exon 33422430 33422769 . - . Parent=GSCOCT00016556001 | |
| 20732 chr1 manual_curation exon 33422222 33422310 . - . Parent=GSCOCT00016556001 | |
| 20733 chr1 manual_curation exon 33420950 33421104 . - . Parent=GSCOCT00016556001 | |
| 20734 chr1 manual_curation exon 33420662 33420778 . - . Parent=GSCOCT00016556001 | |
| 20735 chr1 manual_curation exon 33420415 33420531 . - . Parent=GSCOCT00016556001 | |
| 20736 chr1 manual_curation exon 33420073 33420216 . - . Parent=GSCOCT00016556001 | |
| 20737 chr1 manual_curation exon 33418389 33418985 . - . Parent=GSCOCT00016556001 | |
| 20738 chr1 manual_curation CDS 33422430 33422515 . - 0 Parent=GSCOCT00016556001 | |
| 20739 chr1 manual_curation CDS 33422222 33422310 . - 2 Parent=GSCOCT00016556001 | |
| 20740 chr1 manual_curation CDS 33420950 33421104 . - 1 Parent=GSCOCT00016556001 | |
| 20741 chr1 manual_curation CDS 33420662 33420778 . - 0 Parent=GSCOCT00016556001 | |
| 20742 chr1 manual_curation CDS 33420415 33420531 . - 0 Parent=GSCOCT00016556001 | |
| 20743 chr1 manual_curation CDS 33420073 33420216 . - 0 Parent=GSCOCT00016556001 | |
| 20744 chr1 manual_curation CDS 33418839 33418985 . - 0 Parent=GSCOCT00016556001 | |
| 20745 chr1 manual_curation gene 33428909 33430976 . - . ID=GSCOCG00016555001;Name=Cc01_g15490 | |
| 20746 chr1 manual_curation mRNA 33428909 33430976 . - . ID=GSCOCT00016555001;Parent=GSCOCG00016555001;Name=Cc01_g15490 | |
| 20747 chr1 manual_curation polypeptide 33429537 33430469 . - . ID=GSCOCP00016555001;Dbxref=InterPro:IPR010605,PFAM:PF06697,TAIR:AT3G08600.1,TAIR:AT4G11950.1,TAIR:AT4G22900.1,TrEMBL:B9T0P1,TrEMBL:C6TMK4,TrEMBL:I1LLZ6;Derives_from=GSCOCT00016555001;Name=Cc01_g15490;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF1191),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016555001~ Protein of unknown function (DUF1191)~ unknown_gene~ complete;original_location=3820722..3821654;owner=coffea | |
| 20748 chr1 manual_curation exon 33428909 33430976 . - . Parent=GSCOCT00016555001 | |
| 20749 chr1 manual_curation CDS 33429537 33430469 . - 0 Parent=GSCOCT00016555001 | |
| 20750 chr1 manual_curation gene 33431335 33438309 . - . ID=GSCOCG00016554001;Name=Cc01_g15500 | |
| 20751 chr1 manual_curation mRNA 33431335 33438309 . - . ID=GSCOCT00016554001;Parent=GSCOCG00016554001;Name=Cc01_g15500 | |
| 20752 chr1 manual_curation polypeptide 33432443 33437932 . - . ID=GSCOCP00016554001;Dbxref=TAIR:AT1G30050.1,TAIR:AT2G30530.1,TAIR:AT5G01970.1,TrEMBL:C7AFG4,TrEMBL:D7SJG7,TrEMBL:F6HMS8;Derives_from=GSCOCT00016554001;Name=Cc01_g15500;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016554001~ unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G30050.1)%3B Has 240 Blast hits to 236 proteins in 72 species: Archae - 0%3B Bacteria - 15%3B Metazoa - 51%3B Fungi - 19%3B Plants - 119%3B Viruses - 0%3B Other Eukaryotes - 36 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(3813259..3813546%2C3814959..3815135%2C3815382..3815507%2C3816081..3816284%2C3817457..3817621%2C3818350..3818748);owner=coffea | |
| 20753 chr1 manual_curation exon 33437645 33438309 . - . Parent=GSCOCT00016554001 | |
| 20754 chr1 manual_curation exon 33436056 33436232 . - . Parent=GSCOCT00016554001 | |
| 20755 chr1 manual_curation exon 33435684 33435809 . - . Parent=GSCOCT00016554001 | |
| 20756 chr1 manual_curation exon 33434907 33435110 . - . Parent=GSCOCT00016554001 | |
| 20757 chr1 manual_curation exon 33433570 33433734 . - . Parent=GSCOCT00016554001 | |
| 20758 chr1 manual_curation exon 33431335 33432841 . - . Parent=GSCOCT00016554001 | |
| 20759 chr1 manual_curation CDS 33437645 33437932 . - 0 Parent=GSCOCT00016554001 | |
| 20760 chr1 manual_curation CDS 33436056 33436232 . - 0 Parent=GSCOCT00016554001 | |
| 20761 chr1 manual_curation CDS 33435684 33435809 . - 0 Parent=GSCOCT00016554001 | |
| 20762 chr1 manual_curation CDS 33434907 33435110 . - 0 Parent=GSCOCT00016554001 | |
| 20763 chr1 manual_curation CDS 33433570 33433734 . - 0 Parent=GSCOCT00016554001 | |
| 20764 chr1 manual_curation CDS 33432443 33432841 . - 0 Parent=GSCOCT00016554001 | |
| 20765 chr1 manual_curation gene 33452878 33462381 . - . ID=GSCOCG00016552001;Name=Cc01_g15510 | |
| 20766 chr1 manual_curation mRNA 33452878 33462381 . - . ID=GSCOCT00016552001;Parent=GSCOCG00016552001;Name=Cc01_g15510 | |
| 20767 chr1 manual_curation polypeptide 33453197 33462274 . - . ID=GSCOCP00016552001;Dbxref=InterPro:IPR001140,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR011527,InterPro:IPR017871,InterPro:IPR017940,PFAM:PF00005,PFAM:PF00664,PROFILE:PS50893,PROFILE:PS50929,PROSITE:PS00211,SMART:SM00382,SUPERFAMILY:SSF90123,SwissProt:Q9FUT3,SwissProt:Q9LVM1,SwissProt:Q9M0G9,TAIR:AT4G28620.1,TAIR:AT4G28630.1,TAIR:AT5G58270.1,TrEMBL:B9I784,TrEMBL:B9T3V9,TrEMBL:E4MY05;Derives_from=GSCOCT00016552001;Name=Cc01_g15510;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0006810,GO:0016021,GO:0016887,GO:0017111,GO:0055085,CC_EC_number:3.6.3.44,CC_EC_number:3.6.3.44,PRODUCT:ABC transporter B family member 25%2C mitochondrial,CC_functional_completeness:complete,CC_gene:ABCB25,CC_gene:ABCB23,CC_gene:ABCB24;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016552001~ ABC transporter B family member 25%2C mitochondrial~ ABCB25~ complete;original_location=join(3788917..3789201%2C3789292..3789516%2C3789645..3789831%2C3789996..3790057%2C3790473..3790516%2C3790753..3790855%2C3791033..3791140%2C3791477..3791560%2C3791665..3791725%2C3792367..3792512%2C3792598..3792714%2C3793970..3794055%2C3794545..3794633%2C3795061..3795116%2C3796185..3796265%2C3796387..3796452%2C3796540..3796632%2C3796948..3797012%2C3797363..3797498%2C3797851..3797994);owner=coffea | |
| 20768 chr1 manual_curation exon 33461990 33462381 . - . Parent=GSCOCT00016552001 | |
| 20769 chr1 manual_curation exon 33461675 33461899 . - . Parent=GSCOCT00016552001 | |
| 20770 chr1 manual_curation exon 33461360 33461546 . - . Parent=GSCOCT00016552001 | |
| 20771 chr1 manual_curation exon 33461134 33461195 . - . Parent=GSCOCT00016552001 | |
| 20772 chr1 manual_curation exon 33460675 33460718 . - . Parent=GSCOCT00016552001 | |
| 20773 chr1 manual_curation exon 33460336 33460438 . - . Parent=GSCOCT00016552001 | |
| 20774 chr1 manual_curation exon 33460051 33460158 . - . Parent=GSCOCT00016552001 | |
| 20775 chr1 manual_curation exon 33459631 33459714 . - . Parent=GSCOCT00016552001 | |
| 20776 chr1 manual_curation exon 33459466 33459526 . - . Parent=GSCOCT00016552001 | |
| 20777 chr1 manual_curation exon 33458679 33458824 . - . Parent=GSCOCT00016552001 | |
| 20778 chr1 manual_curation exon 33458477 33458593 . - . Parent=GSCOCT00016552001 | |
| 20779 chr1 manual_curation exon 33457136 33457221 . - . Parent=GSCOCT00016552001 | |
| 20780 chr1 manual_curation exon 33456558 33456646 . - . Parent=GSCOCT00016552001 | |
| 20781 chr1 manual_curation exon 33456075 33456130 . - . Parent=GSCOCT00016552001 | |
| 20782 chr1 manual_curation exon 33454926 33455006 . - . Parent=GSCOCT00016552001 | |
| 20783 chr1 manual_curation exon 33454739 33454804 . - . Parent=GSCOCT00016552001 | |
| 20784 chr1 manual_curation exon 33454559 33454651 . - . Parent=GSCOCT00016552001 | |
| 20785 chr1 manual_curation exon 33454179 33454243 . - . Parent=GSCOCT00016552001 | |
| 20786 chr1 manual_curation exon 33453693 33453828 . - . Parent=GSCOCT00016552001 | |
| 20787 chr1 manual_curation exon 33452878 33453340 . - . Parent=GSCOCT00016552001 | |
| 20788 chr1 manual_curation CDS 33461990 33462274 . - 0 Parent=GSCOCT00016552001 | |
| 20789 chr1 manual_curation CDS 33461675 33461899 . - 0 Parent=GSCOCT00016552001 | |
| 20790 chr1 manual_curation CDS 33461360 33461546 . - 0 Parent=GSCOCT00016552001 | |
| 20791 chr1 manual_curation CDS 33461134 33461195 . - 1 Parent=GSCOCT00016552001 | |
| 20792 chr1 manual_curation CDS 33460675 33460718 . - 0 Parent=GSCOCT00016552001 | |
| 20793 chr1 manual_curation CDS 33460336 33460438 . - 2 Parent=GSCOCT00016552001 | |
| 20794 chr1 manual_curation CDS 33460051 33460158 . - 0 Parent=GSCOCT00016552001 | |
| 20795 chr1 manual_curation CDS 33459631 33459714 . - 0 Parent=GSCOCT00016552001 | |
| 20796 chr1 manual_curation CDS 33459466 33459526 . - 0 Parent=GSCOCT00016552001 | |
| 20797 chr1 manual_curation CDS 33458679 33458824 . - 1 Parent=GSCOCT00016552001 | |
| 20798 chr1 manual_curation CDS 33458477 33458593 . - 0 Parent=GSCOCT00016552001 | |
| 20799 chr1 manual_curation CDS 33457136 33457221 . - 0 Parent=GSCOCT00016552001 | |
| 20800 chr1 manual_curation CDS 33456558 33456646 . - 2 Parent=GSCOCT00016552001 | |
| 20801 chr1 manual_curation CDS 33456075 33456130 . - 1 Parent=GSCOCT00016552001 | |
| 20802 chr1 manual_curation CDS 33454926 33455006 . - 0 Parent=GSCOCT00016552001 | |
| 20803 chr1 manual_curation CDS 33454739 33454804 . - 0 Parent=GSCOCT00016552001 | |
| 20804 chr1 manual_curation CDS 33454559 33454651 . - 0 Parent=GSCOCT00016552001 | |
| 20805 chr1 manual_curation CDS 33454179 33454243 . - 0 Parent=GSCOCT00016552001 | |
| 20806 chr1 manual_curation CDS 33453693 33453828 . - 2 Parent=GSCOCT00016552001 | |
| 20807 chr1 manual_curation CDS 33453197 33453340 . - 0 Parent=GSCOCT00016552001 | |
| 20808 chr1 manual_curation gene 33463756 33465117 . - . ID=GSCOCG00016551001;Name=Cc01_g15520 | |
| 20809 chr1 manual_curation mRNA 33463756 33465117 . - . ID=GSCOCT00016551001;Parent=GSCOCG00016551001;Name=Cc01_g15520 | |
| 20810 chr1 manual_curation polypeptide 33464004 33464813 . - . ID=GSCOCP00016551001;Dbxref=TAIR:AT5G51340.1,TrEMBL:A5AMD4,TrEMBL:D7SJG2,TrEMBL:I1JHP4;Derives_from=GSCOCT00016551001;Name=Cc01_g15520;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Tetratricopeptide repeat (TPR)-like superfamily protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016551001~ Tetratricopeptide repeat (TPR)-like superfamily protein~ unknown_gene~ fragment;original_location=3786378..3787187;owner=coffea | |
| 20811 chr1 manual_curation exon 33463756 33465117 . - . Parent=GSCOCT00016551001 | |
| 20812 chr1 manual_curation CDS 33464004 33464813 . - 0 Parent=GSCOCT00016551001 | |
| 20813 chr1 manual_curation gene 33465175 33469855 . - . ID=GSCOCG00016550001;Name=Cc01_g15530 | |
| 20814 chr1 manual_curation mRNA 33465175 33469855 . - . ID=GSCOCT00016550001;Parent=GSCOCG00016550001;Name=Cc01_g15530 | |
| 20815 chr1 manual_curation polypeptide 33465175 33469754 . - . ID=GSCOCP00016550001;Dbxref=InterPro:IPR019440,PFAM:PF10345,TAIR:AT5G51340.1,TrEMBL:D7SJG2,TrEMBL:I1JHP4,TrEMBL:I1MBN1;Derives_from=GSCOCT00016550001;Name=Cc01_g15530;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Tetratricopeptide repeat (TPR)-like superfamily protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016550001~ Tetratricopeptide repeat (TPR)-like superfamily protein~ unknown_gene~ fragment;original_location=join(3781437..3781649%2C3783554..3783705%2C3783845..3783986%2C3784269..3784385%2C3785643..3785922%2C3785997..3786016);owner=coffea | |
| 20816 chr1 manual_curation exon 33469542 33469855 . - . Parent=GSCOCT00016550001 | |
| 20817 chr1 manual_curation exon 33467486 33467637 . - . Parent=GSCOCT00016550001 | |
| 20818 chr1 manual_curation exon 33467205 33467346 . - . Parent=GSCOCT00016550001 | |
| 20819 chr1 manual_curation exon 33466806 33466922 . - . Parent=GSCOCT00016550001 | |
| 20820 chr1 manual_curation exon 33465269 33465548 . - . Parent=GSCOCT00016550001 | |
| 20821 chr1 manual_curation exon 33465175 33465194 . - . Parent=GSCOCT00016550001 | |
| 20822 chr1 manual_curation CDS 33469542 33469754 . - 0 Parent=GSCOCT00016550001 | |
| 20823 chr1 manual_curation CDS 33467486 33467637 . - 0 Parent=GSCOCT00016550001 | |
| 20824 chr1 manual_curation CDS 33467205 33467346 . - 2 Parent=GSCOCT00016550001 | |
| 20825 chr1 manual_curation CDS 33466806 33466922 . - 0 Parent=GSCOCT00016550001 | |
| 20826 chr1 manual_curation CDS 33465269 33465548 . - 0 Parent=GSCOCT00016550001 | |
| 20827 chr1 manual_curation CDS 33465175 33465194 . - 1 Parent=GSCOCT00016550001 | |
| 20828 chr1 manual_curation gene 33481532 33482235 . + . ID=GSCOCG00016549001;Name=Cc01_g15540 | |
| 20829 chr1 manual_curation mRNA 33481532 33482235 . + . ID=GSCOCT00016549001;Parent=GSCOCG00016549001;Name=Cc01_g15540 | |
| 20830 chr1 manual_curation polypeptide 33481787 33482235 . + . ID=GSCOCP00016549001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,PANTHER:PTHR19383,PFAM:PF00067,SUPERFAMILY:SSF48264,TAIR:AT2G26710.1,TAIR:AT5G24900.1,TAIR:AT5G24910.1,TrEMBL:B9SK63,TrEMBL:F6GVZ6,TrEMBL:F6HWD8;Derives_from=GSCOCT00016549001;Name=Cc01_g15540;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,CC_EC_number:missing_EC_number,PRODUCT:Putative cytochrome P450%2C family 714%2C subfamily A%2C polypeptide 1,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016549001~ Putative cytochrome P450%2C family 714%2C subfamily A%2C polypeptide 1~ unknown_gene~ fragment;original_location=complement(join(3769326..3769404%2C3768956..3769218));owner=coffea | |
| 20831 chr1 manual_curation exon 33481973 33482235 . + . Parent=GSCOCT00016549001 | |
| 20832 chr1 manual_curation exon 33481532 33481865 . + . Parent=GSCOCT00016549001 | |
| 20833 chr1 manual_curation CDS 33481973 33482235 . + 1 Parent=GSCOCT00016549001 | |
| 20834 chr1 manual_curation CDS 33481787 33481865 . + 0 Parent=GSCOCT00016549001 | |
| 20835 chr1 manual_curation gene 33482303 33483545 . + . ID=GSCOCG00016548001;Name=Cc01_g15550 | |
| 20836 chr1 manual_curation mRNA 33482303 33483545 . + . ID=GSCOCT00016548001;Parent=GSCOCG00016548001;Name=Cc01_g15550 | |
| 20837 chr1 manual_curation polypeptide 33482303 33483545 . + . ID=GSCOCP00016548001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:B9X287,SwissProt:O48786,SwissProt:Q9FF18,TAIR:AT4G27710.1,TAIR:AT5G24900.1,TAIR:AT5G24910.1,TrEMBL:B9I787,TrEMBL:F6GVZ6,TrEMBL:F6HWD8;Derives_from=GSCOCT00016548001;Name=Cc01_g15550;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.3.3.9,PRODUCT:Putative Cytochrome P450 734A6,CC_functional_completeness:fragment,CC_gene:CYP734A6,CC_gene:CYP735A1,CC_gene:CYP734A1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016548001~ Putative Cytochrome P450 734A6~ CYP734A6~ fragment;original_location=complement(join(3768614..3768888%2C3768170..3768524%2C3767646..3768071));owner=coffea | |
| 20838 chr1 manual_curation exon 33483120 33483545 . + . Parent=GSCOCT00016548001 | |
| 20839 chr1 manual_curation exon 33482667 33483021 . + . Parent=GSCOCT00016548001 | |
| 20840 chr1 manual_curation exon 33482303 33482577 . + . Parent=GSCOCT00016548001 | |
| 20841 chr1 manual_curation CDS 33483120 33483545 . + 0 Parent=GSCOCT00016548001 | |
| 20842 chr1 manual_curation CDS 33482667 33483021 . + 2 Parent=GSCOCT00016548001 | |
| 20843 chr1 manual_curation CDS 33482303 33482577 . + 0 Parent=GSCOCT00016548001 | |
| 20844 chr1 manual_curation gene 33489175 33491592 . + . ID=GSCOCG00016547001;Name=Cc01_g15560 | |
| 20845 chr1 manual_curation mRNA 33489175 33491592 . + . ID=GSCOCT00016547001;Parent=GSCOCG00016547001;Name=Cc01_g15560 | |
| 20846 chr1 manual_curation polypeptide 33489175 33491592 . + . ID=GSCOCP00016547001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:B9X287,SwissProt:O48786,SwissProt:Q9FF18,TAIR:AT2G26710.1,TAIR:AT5G24900.1,TAIR:AT5G24910.1,TrEMBL:B9SK63,TrEMBL:F6GVZ6,TrEMBL:F6HWD8;Derives_from=GSCOCT00016547001;Name=Cc01_g15560;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.3.3.9,PRODUCT:Putative Cytochrome P450 734A1,CC_functional_completeness:complete,CC_gene:CYP734A1,CC_gene:CYP735A1,CC_gene:CYP734A6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016547001~ Putative Cytochrome P450 734A1~ CYP734A1~ complete;original_location=complement(join(3761728..3762016%2C3760987..3761213%2C3760611..3760858%2C3760128..3760482%2C3759599..3760024));owner=coffea | |
| 20847 chr1 manual_curation exon 33491167 33491592 . + . Parent=GSCOCT00016547001 | |
| 20848 chr1 manual_curation exon 33490709 33491063 . + . Parent=GSCOCT00016547001 | |
| 20849 chr1 manual_curation exon 33490333 33490580 . + . Parent=GSCOCT00016547001 | |
| 20850 chr1 manual_curation exon 33489978 33490204 . + . Parent=GSCOCT00016547001 | |
| 20851 chr1 manual_curation exon 33489175 33489463 . + . Parent=GSCOCT00016547001 | |
| 20852 chr1 manual_curation CDS 33491167 33491592 . + 0 Parent=GSCOCT00016547001 | |
| 20853 chr1 manual_curation CDS 33490709 33491063 . + 2 Parent=GSCOCT00016547001 | |
| 20854 chr1 manual_curation CDS 33490333 33490580 . + 0 Parent=GSCOCT00016547001 | |
| 20855 chr1 manual_curation CDS 33489978 33490204 . + 1 Parent=GSCOCT00016547001 | |
| 20856 chr1 manual_curation CDS 33489175 33489463 . + 0 Parent=GSCOCT00016547001 | |
| 20857 chr1 manual_curation gene 33496184 33497867 . + . ID=GSCOCG00016546001;Name=Cc01_g15570 | |
| 20858 chr1 manual_curation mRNA 33496184 33497867 . + . ID=GSCOCT00016546001;Parent=GSCOCG00016546001;Name=Cc01_g15570 | |
| 20859 chr1 manual_curation polypeptide 33496184 33497867 . + . ID=GSCOCP00016546001;Dbxref=InterPro:IPR003388,PANTHER:PTHR10994,PFAM:PF02453,PROFILE:PS50845,SwissProt:O82352,SwissProt:Q6DBN4,SwissProt:Q9SUR3,TAIR:AT2G46170.1,TAIR:AT4G11220.1,TAIR:AT4G23630.1,TrEMBL:A2WMA1,TrEMBL:I1HDG5,TrEMBL:Q9AWY7;Derives_from=GSCOCT00016546001;Name=Cc01_g15570;Ontology_term=CC_evidence_code:ISS,GO:0005783,CC_EC_number:missing_EC_number,PRODUCT:Reticulon-like protein B5,CC_functional_completeness:complete,CC_gene:RTNLB5,CC_gene:RTNLB1,CC_gene:RTNLB6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016546001~ Reticulon-like protein B5~ RTNLB5~ complete;original_location=complement(join(3754833..3755007%2C3754179..3754359%2C3753903..3754044%2C3753741..3753810%2C3753324..3753484));owner=coffea | |
| 20860 chr1 manual_curation exon 33497707 33497867 . + . Parent=GSCOCT00016546001 | |
| 20861 chr1 manual_curation exon 33497381 33497450 . + . Parent=GSCOCT00016546001 | |
| 20862 chr1 manual_curation exon 33497147 33497288 . + . Parent=GSCOCT00016546001 | |
| 20863 chr1 manual_curation exon 33496832 33497012 . + . Parent=GSCOCT00016546001 | |
| 20864 chr1 manual_curation exon 33496184 33496358 . + . Parent=GSCOCT00016546001 | |
| 20865 chr1 manual_curation CDS 33497707 33497867 . + 1 Parent=GSCOCT00016546001 | |
| 20866 chr1 manual_curation CDS 33497381 33497450 . + 0 Parent=GSCOCT00016546001 | |
| 20867 chr1 manual_curation CDS 33497147 33497288 . + 2 Parent=GSCOCT00016546001 | |
| 20868 chr1 manual_curation CDS 33496832 33497012 . + 1 Parent=GSCOCT00016546001 | |
| 20869 chr1 manual_curation CDS 33496184 33496358 . + 0 Parent=GSCOCT00016546001 | |
| 20870 chr1 manual_curation gene 33498595 33500424 . - . ID=GSCOCG00016545001;Name=Cc01_g15580 | |
| 20871 chr1 manual_curation mRNA 33498595 33500424 . - . ID=GSCOCT00016545001;Parent=GSCOCG00016545001;Name=Cc01_g15580 | |
| 20872 chr1 manual_curation polypeptide 33499114 33500168 . - . ID=GSCOCP00016545001;Dbxref=InterPro:IPR019616,PFAM:PF10674,TAIR:AT5G58250.1,TrEMBL:A5AMD2,TrEMBL:B9SK65,TrEMBL:F6GU66;Derives_from=GSCOCT00016545001;Name=Cc01_g15580;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016545001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=join(3751023..3751256%2C3751417..3751655%2C3751885..3752077);owner=coffea | |
| 20873 chr1 manual_curation exon 33499935 33500424 . - . Parent=GSCOCT00016545001 | |
| 20874 chr1 manual_curation exon 33499536 33499774 . - . Parent=GSCOCT00016545001 | |
| 20875 chr1 manual_curation exon 33498595 33499306 . - . Parent=GSCOCT00016545001 | |
| 20876 chr1 manual_curation CDS 33499935 33500168 . - 0 Parent=GSCOCT00016545001 | |
| 20877 chr1 manual_curation CDS 33499536 33499774 . - 0 Parent=GSCOCT00016545001 | |
| 20878 chr1 manual_curation CDS 33499114 33499306 . - 2 Parent=GSCOCT00016545001 | |
| 20879 chr1 manual_curation gene 33501139 33503057 . - . ID=GSCOCG00016544001;Name=Cc01_g15590 | |
| 20880 chr1 manual_curation mRNA 33501139 33503057 . - . ID=GSCOCT00016544001;Parent=GSCOCG00016544001;Name=Cc01_g15590 | |
| 20881 chr1 manual_curation polypeptide 33501431 33502877 . - . ID=GSCOCP00016544001;Dbxref=GENE3D:G3DSA:3.90.1030.10,HAMAP:MF_01368,InterPro:IPR000456,PANTHER:PTHR14413,PFAM:PF01196,SUPERFAMILY:SSF64263,SwissProt:A5GVY4,SwissProt:O80363,SwissProt:Q9M385,TAIR:AT3G54210.1,TAIR:AT5G09770.1,TAIR:AT5G64650.1,TIGRFAMs:TIGR00059,TrEMBL:B7FGK1,TrEMBL:C6T088,TrEMBL:I1LM05;Derives_from=GSCOCT00016544001;Name=Cc01_g15590;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:50S ribosomal protein L17%2C chloroplastic,CC_functional_completeness:complete,CC_gene:RPL17,CC_gene:rplQ;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016544001~ 50S ribosomal protein L17%2C chloroplastic~ RPL17~ complete;original_location=join(3748314..3748539%2C3749351..3749760);owner=coffea | |
| 20882 chr1 manual_curation exon 33502652 33503057 . - . Parent=GSCOCT00016544001 | |
| 20883 chr1 manual_curation exon 33501139 33501840 . - . Parent=GSCOCT00016544001 | |
| 20884 chr1 manual_curation CDS 33502652 33502877 . - 0 Parent=GSCOCT00016544001 | |
| 20885 chr1 manual_curation CDS 33501431 33501840 . - 1 Parent=GSCOCT00016544001 | |
| 20886 chr1 manual_curation gene 33504605 33507648 . + . ID=GSCOCG00016543001;Name=Cc01_g15600 | |
| 20887 chr1 manual_curation mRNA 33504605 33507648 . + . ID=GSCOCT00016543001;Parent=GSCOCG00016543001;Name=Cc01_g15600 | |
| 20888 chr1 manual_curation polypeptide 33504605 33507146 . + . ID=GSCOCP00016543001;Dbxref=GENE3D:G3DSA:3.30.428.10,InterPro:IPR001310,InterPro:IPR011146,InterPro:IPR011151,InterPro:IPR019808,PANTHER:PTHR23089,PFAM:PF01230,PROFILE:PS51084,PROSITE:PS00892,SUPERFAMILY:SSF54197,SwissProt:Q1KZG4,SwissProt:Q86KK2,SwissProt:Q9JIX3,TAIR:AT5G58240.1,TrEMBL:A9PH59,TrEMBL:B9IQX9,TrEMBL:I1MZM4;Derives_from=GSCOCT00016543001;Name=Cc01_g15600;Ontology_term=CC_evidence_code:ISS,GO:0003824,CC_EC_number:3.6.1.29,PRODUCT:Putative Bis(5'-adenosyl)-triphosphatase,CC_functional_completeness:modules,CC_gene:fhit,CC_gene:FHIT,CC_gene:Fhit;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016543001~ Putative Bis(5'-adenosyl)-triphosphatase~ fhit~ modules;original_location=complement(join(3746422..3746586%2C3746165..3746273%2C3745758..3745788%2C3745443..3745499%2C3745039..3745165%2C3744266..3744364%2C3744045..3744161));owner=coffea | |
| 20889 chr1 manual_curation exon 33507030 33507648 . + . Parent=GSCOCT00016543001 | |
| 20890 chr1 manual_curation exon 33506827 33506925 . + . Parent=GSCOCT00016543001 | |
| 20891 chr1 manual_curation exon 33506026 33506152 . + . Parent=GSCOCT00016543001 | |
| 20892 chr1 manual_curation exon 33505692 33505748 . + . Parent=GSCOCT00016543001 | |
| 20893 chr1 manual_curation exon 33505403 33505433 . + . Parent=GSCOCT00016543001 | |
| 20894 chr1 manual_curation exon 33504918 33505026 . + . Parent=GSCOCT00016543001 | |
| 20895 chr1 manual_curation exon 33504605 33504769 . + . Parent=GSCOCT00016543001 | |
| 20896 chr1 manual_curation CDS 33507030 33507146 . + 0 Parent=GSCOCT00016543001 | |
| 20897 chr1 manual_curation CDS 33506827 33506925 . + 0 Parent=GSCOCT00016543001 | |
| 20898 chr1 manual_curation CDS 33506026 33506152 . + 2 Parent=GSCOCT00016543001 | |
| 20899 chr1 manual_curation CDS 33505692 33505748 . + 2 Parent=GSCOCT00016543001 | |
| 20900 chr1 manual_curation CDS 33505403 33505433 . + 1 Parent=GSCOCT00016543001 | |
| 20901 chr1 manual_curation CDS 33504918 33505026 . + 0 Parent=GSCOCT00016543001 | |
| 20902 chr1 manual_curation CDS 33504605 33504769 . + 0 Parent=GSCOCT00016543001 | |
| 20903 chr1 manual_curation gene 33508924 33518781 . + . ID=GSCOCG00016542001;Name=Cc01_g15610 | |
| 20904 chr1 manual_curation mRNA 33508924 33518781 . + . ID=GSCOCT00016542001;Parent=GSCOCG00016542001;Name=Cc01_g15610 | |
| 20905 chr1 manual_curation polypeptide 33508924 33518558 . + . ID=GSCOCP00016542001;Dbxref=InterPro:IPR001650,InterPro:IPR002121,InterPro:IPR004589,InterPro:IPR011545,InterPro:IPR014001,InterPro:IPR014021,InterPro:IPR018329,InterPro:IPR018982,PANTHER:PTHR13710,PFAM:PF00270,PFAM:PF00271,PFAM:PF00570,PFAM:PF09382,PROFILE:PS50967,PROFILE:PS51192,PROFILE:PS51194,SMART:SM00341,SMART:SM00487,SMART:SM00490,SwissProt:O93530,SwissProt:Q14191,SwissProt:Q9CL21,TAIR:AT1G10930.1,TAIR:AT1G31360.1,TAIR:AT1G60930.1,TIGRFAMs:TIGR00614,TrEMBL:B9I791,TrEMBL:C5X5N6,TrEMBL:Q7XHW1;Derives_from=GSCOCT00016542001;Name=Cc01_g15610;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0004386,GO:0005524,GO:0005622,GO:0006260,GO:0006281,GO:0006310,GO:0008026,GO:0043140,CC_EC_number:missing_EC_number,PRODUCT:Putative ATP-dependent DNA helicase recQ,CC_functional_completeness:modules,CC_gene:WRN,CC_gene:recQ,CC_gene:wrn;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016542001~ Putative ATP-dependent DNA helicase recQ~ WRN~ modules;original_location=complement(join(3742239..3742267%2C3742018..3742093%2C3741778..3741920%2C3740032..3740118%2C3739023..3739106%2C3738684..3738891%2C3738436..3738521%2C3737959..3738190%2C3737747..3737870%2C3736995..3737131%2C3736576..3736684%2C3735551..3735593%2C3735184..3735355%2C3734851..3734921%2C3734609..3734702%2C3733680..3733889%2C3733392..3733598%2C3732852..3733253%2C3732633..3732758));owner=coffea | |
| 20906 chr1 manual_curation exon 33518433 33518781 . + . Parent=GSCOCT00016542001 | |
| 20907 chr1 manual_curation exon 33517938 33518339 . + . Parent=GSCOCT00016542001 | |
| 20908 chr1 manual_curation exon 33517593 33517799 . + . Parent=GSCOCT00016542001 | |
| 20909 chr1 manual_curation exon 33517302 33517511 . + . Parent=GSCOCT00016542001 | |
| 20910 chr1 manual_curation exon 33516489 33516582 . + . Parent=GSCOCT00016542001 | |
| 20911 chr1 manual_curation exon 33516270 33516340 . + . Parent=GSCOCT00016542001 | |
| 20912 chr1 manual_curation exon 33515836 33516007 . + . Parent=GSCOCT00016542001 | |
| 20913 chr1 manual_curation exon 33515598 33515640 . + . Parent=GSCOCT00016542001 | |
| 20914 chr1 manual_curation exon 33514507 33514615 . + . Parent=GSCOCT00016542001 | |
| 20915 chr1 manual_curation exon 33514060 33514196 . + . Parent=GSCOCT00016542001 | |
| 20916 chr1 manual_curation exon 33513321 33513444 . + . Parent=GSCOCT00016542001 | |
| 20917 chr1 manual_curation exon 33513001 33513232 . + . Parent=GSCOCT00016542001 | |
| 20918 chr1 manual_curation exon 33512670 33512755 . + . Parent=GSCOCT00016542001 | |
| 20919 chr1 manual_curation exon 33512300 33512507 . + . Parent=GSCOCT00016542001 | |
| 20920 chr1 manual_curation exon 33512085 33512168 . + . Parent=GSCOCT00016542001 | |
| 20921 chr1 manual_curation exon 33511073 33511159 . + . Parent=GSCOCT00016542001 | |
| 20922 chr1 manual_curation exon 33509271 33509413 . + . Parent=GSCOCT00016542001 | |
| 20923 chr1 manual_curation exon 33509098 33509173 . + . Parent=GSCOCT00016542001 | |
| 20924 chr1 manual_curation exon 33508924 33508952 . + . Parent=GSCOCT00016542001 | |
| 20925 chr1 manual_curation CDS 33518433 33518558 . + 0 Parent=GSCOCT00016542001 | |
| 20926 chr1 manual_curation CDS 33517938 33518339 . + 0 Parent=GSCOCT00016542001 | |
| 20927 chr1 manual_curation CDS 33517593 33517799 . + 0 Parent=GSCOCT00016542001 | |
| 20928 chr1 manual_curation CDS 33517302 33517511 . + 0 Parent=GSCOCT00016542001 | |
| 20929 chr1 manual_curation CDS 33516489 33516582 . + 2 Parent=GSCOCT00016542001 | |
| 20930 chr1 manual_curation CDS 33516270 33516340 . + 0 Parent=GSCOCT00016542001 | |
| 20931 chr1 manual_curation CDS 33515836 33516007 . + 2 Parent=GSCOCT00016542001 | |
| 20932 chr1 manual_curation CDS 33515598 33515640 . + 1 Parent=GSCOCT00016542001 | |
| 20933 chr1 manual_curation CDS 33514507 33514615 . + 0 Parent=GSCOCT00016542001 | |
| 20934 chr1 manual_curation CDS 33514060 33514196 . + 1 Parent=GSCOCT00016542001 | |
| 20935 chr1 manual_curation CDS 33513321 33513444 . + 0 Parent=GSCOCT00016542001 | |
| 20936 chr1 manual_curation CDS 33513001 33513232 . + 2 Parent=GSCOCT00016542001 | |
| 20937 chr1 manual_curation CDS 33512670 33512755 . + 0 Parent=GSCOCT00016542001 | |
| 20938 chr1 manual_curation CDS 33512300 33512507 . + 2 Parent=GSCOCT00016542001 | |
| 20939 chr1 manual_curation CDS 33512085 33512168 . + 2 Parent=GSCOCT00016542001 | |
| 20940 chr1 manual_curation CDS 33511073 33511159 . + 2 Parent=GSCOCT00016542001 | |
| 20941 chr1 manual_curation CDS 33509271 33509413 . + 0 Parent=GSCOCT00016542001 | |
| 20942 chr1 manual_curation CDS 33509098 33509173 . + 2 Parent=GSCOCT00016542001 | |
| 20943 chr1 manual_curation CDS 33508924 33508952 . + 0 Parent=GSCOCT00016542001 | |
| 20944 chr1 manual_curation gene 33520089 33522344 . - . ID=GSCOCG00016541001;Name=Cc01_g15620 | |
| 20945 chr1 manual_curation mRNA 33520089 33522344 . - . ID=GSCOCT00016541001;Parent=GSCOCG00016541001;Name=Cc01_g15620 | |
| 20946 chr1 manual_curation polypeptide 33520342 33521746 . - . ID=GSCOCP00016541001;Dbxref=InterPro:IPR006769,PANTHER:PTHR13462,PFAM:PF04678,SwissProt:Q08BI9,SwissProt:Q3UMR5,SwissProt:Q8NE86,TAIR:AT1G09575.1,TAIR:AT1G57610.1,TAIR:AT4G36820.1,TrEMBL:B9SK68,TrEMBL:F6GU61,TrEMBL:I1MZM0;Derives_from=GSCOCT00016541001;Name=Cc01_g15620;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF607),CC_functional_completeness:fragment,CC_gene:MCU,CC_gene:mcu,CC_gene:Mcu;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016541001~ Protein of unknown function (DUF607)~ MCU~ fragment;original_location=join(3729445..3729648%2C3730361..3730849);owner=coffea | |
| 20947 chr1 manual_curation exon 33521543 33522344 . - . Parent=GSCOCT00016541001 | |
| 20948 chr1 manual_curation exon 33520089 33520830 . - . Parent=GSCOCT00016541001 | |
| 20949 chr1 manual_curation CDS 33521543 33521746 . - 0 Parent=GSCOCT00016541001 | |
| 20950 chr1 manual_curation CDS 33520342 33520830 . - 0 Parent=GSCOCT00016541001 | |
| 20951 chr1 manual_curation gene 33523636 33528316 . - . ID=GSCOCG00016540001;Name=Cc01_g15630 | |
| 20952 chr1 manual_curation mRNA 33523636 33528316 . - . ID=GSCOCT00016540001;Parent=GSCOCG00016540001;Name=Cc01_g15630 | |
| 20953 chr1 manual_curation polypeptide 33525175 33527860 . - . ID=GSCOCP00016540001;Dbxref=InterPro:IPR006634,PFAM:PF03798,PROFILE:PS50922,SMART:SM00724,SwissProt:Q6PGS5,SwissProt:Q8CGF5,SwissProt:Q96MV1,TAIR:AT1G31300.1,TAIR:AT4G10360.1,TAIR:AT4G19645.1,TrEMBL:C6TFQ6,TrEMBL:D7SJF6,TrEMBL:I1LM10;Derives_from=GSCOCT00016540001;Name=Cc01_g15630;Ontology_term=CC_evidence_code:ISS,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Putative Transmembrane protein 56-B,CC_functional_completeness:modules,CC_gene:tmem56-b,CC_gene:TMEM56,CC_gene:Tmem56;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016540001~ Putative Transmembrane protein 56-B~ tmem56-b~ modules;original_location=join(3723331..3723447%2C3723959..3724047%2C3724184..3724322%2C3724783..3724857%2C3725087..3725208%2C3725301..3725376%2C3725462..3725521%2C3725879..3726016);owner=coffea | |
| 20954 chr1 manual_curation exon 33528015 33528316 . - . Parent=GSCOCT00016540001 | |
| 20955 chr1 manual_curation exon 33527744 33527887 . - . Parent=GSCOCT00016540001 | |
| 20956 chr1 manual_curation exon 33527144 33527232 . - . Parent=GSCOCT00016540001 | |
| 20957 chr1 manual_curation exon 33526869 33527007 . - . Parent=GSCOCT00016540001 | |
| 20958 chr1 manual_curation exon 33526334 33526408 . - . Parent=GSCOCT00016540001 | |
| 20959 chr1 manual_curation exon 33525983 33526104 . - . Parent=GSCOCT00016540001 | |
| 20960 chr1 manual_curation exon 33525815 33525890 . - . Parent=GSCOCT00016540001 | |
| 20961 chr1 manual_curation exon 33525670 33525729 . - . Parent=GSCOCT00016540001 | |
| 20962 chr1 manual_curation exon 33523636 33525312 . - . Parent=GSCOCT00016540001 | |
| 20963 chr1 manual_curation CDS 33527744 33527860 . - 0 Parent=GSCOCT00016540001 | |
| 20964 chr1 manual_curation CDS 33527144 33527232 . - 0 Parent=GSCOCT00016540001 | |
| 20965 chr1 manual_curation CDS 33526869 33527007 . - 2 Parent=GSCOCT00016540001 | |
| 20966 chr1 manual_curation CDS 33526334 33526408 . - 0 Parent=GSCOCT00016540001 | |
| 20967 chr1 manual_curation CDS 33525983 33526104 . - 0 Parent=GSCOCT00016540001 | |
| 20968 chr1 manual_curation CDS 33525815 33525890 . - 2 Parent=GSCOCT00016540001 | |
| 20969 chr1 manual_curation CDS 33525670 33525729 . - 0 Parent=GSCOCT00016540001 | |
| 20970 chr1 manual_curation CDS 33525175 33525312 . - 0 Parent=GSCOCT00016540001 | |
| 20971 chr1 manual_curation gene 33531988 33535452 . + . ID=GSCOCG00016538001;Name=Cc01_g15640 | |
| 20972 chr1 manual_curation mRNA 33531988 33535452 . + . ID=GSCOCT00016538001;Parent=GSCOCG00016538001;Name=Cc01_g15640 | |
| 20973 chr1 manual_curation polypeptide 33532642 33535452 . + . ID=GSCOCP00016538001;Dbxref=GENE3D:G3DSA:3.40.532.10,InterPro:IPR001578,InterPro:IPR017390,PANTHER:PTHR10589,PFAM:PF01088,PIR:PIRSF038120,PRINTS:PR00707,SwissProt:Q06AT3,SwissProt:Q9XSJ0,SwissProt:Q9Y5K5,TAIR:AT1G65650.1,TAIR:AT4G17510.1,TAIR:AT5G16310.1,TrEMBL:A5AU65,TrEMBL:I1LBV4,TrEMBL:I1NIJ5;Derives_from=GSCOCT00016538001;Name=Cc01_g15640;Ontology_term=CC_evidence_code:ISS,GO:0004221,GO:0005622,GO:0006511,CC_EC_number:3.4.19.12,PRODUCT:Ubiquitin carboxyl-terminal hydrolase isozyme L5,CC_functional_completeness:complete,CC_gene:UCHL5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016538001~ Ubiquitin carboxyl-terminal hydrolase isozyme L5~ UCHL5~ complete;original_location=complement(join(3718519..3718549%2C3717576..3717622%2C3716824..3716870%2C3716602..3716704%2C3715739..3716515));owner=coffea | |
| 20974 chr1 manual_curation exon 33531988 33532226 . + . Parent=GSCOCT00016538001 | |
| 20975 chr1 manual_curation exon 33534676 33535452 . + . Parent=GSCOCT00016538001 | |
| 20976 chr1 manual_curation exon 33534487 33534589 . + . Parent=GSCOCT00016538001 | |
| 20977 chr1 manual_curation exon 33534321 33534367 . + . Parent=GSCOCT00016538001 | |
| 20978 chr1 manual_curation exon 33533569 33533615 . + . Parent=GSCOCT00016538001 | |
| 20979 chr1 manual_curation exon 33532627 33532672 . + . Parent=GSCOCT00016538001 | |
| 20980 chr1 manual_curation CDS 33534676 33535452 . + 0 Parent=GSCOCT00016538001 | |
| 20981 chr1 manual_curation CDS 33534487 33534589 . + 2 Parent=GSCOCT00016538001 | |
| 20982 chr1 manual_curation CDS 33534321 33534367 . + 0 Parent=GSCOCT00016538001 | |
| 20983 chr1 manual_curation CDS 33533569 33533615 . + 1 Parent=GSCOCT00016538001 | |
| 20984 chr1 manual_curation CDS 33532642 33532672 . + 0 Parent=GSCOCT00016538001 | |
| 20985 chr1 manual_curation gene 33535604 33540446 . - . ID=GSCOCG00016537001;Name=Cc01_g15650 | |
| 20986 chr1 manual_curation mRNA 33535604 33540446 . - . ID=GSCOCT00016537001;Parent=GSCOCG00016537001;Name=Cc01_g15650 | |
| 20987 chr1 manual_curation polypeptide 33536856 33539438 . - . ID=GSCOCP00016537001;Dbxref=GENE3D:G3DSA:3.20.20.70,InterPro:IPR000644,InterPro:IPR013785,PFAM:PF00571,PROFILE:PS51371,SMART:SM00116,SwissProt:O34682,SwissProt:P54606,SwissProt:Q9LEV3,TAIR:AT1G47271.1,TAIR:AT5G10860.1,TrEMBL:A0T1V6,TrEMBL:B9I794,TrEMBL:D7SJF5;Derives_from=GSCOCT00016537001;Name=Cc01_g15650;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,CC_EC_number:1.1.1.205,PRODUCT:CBS domain-containing protein CBSX3%2C mitochondrial,CC_functional_completeness:complete,CC_gene:CBSX3,CC_gene:ylbB,CC_gene:yhcV;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016537001~ CBS domain-containing protein CBSX3%2C mitochondrial~ CBSX3~ complete;original_location=join(3711753..3711786%2C3711896..3712158%2C3712375..3712456%2C3713858..3713931%2C3714038..3714098%2C3714193..3714335);owner=coffea | |
| 20988 chr1 manual_curation exon 33539405 33540446 . - . Parent=GSCOCT00016537001 | |
| 20989 chr1 manual_curation exon 33539033 33539295 . - . Parent=GSCOCT00016537001 | |
| 20990 chr1 manual_curation exon 33538735 33538816 . - . Parent=GSCOCT00016537001 | |
| 20991 chr1 manual_curation exon 33537260 33537333 . - . Parent=GSCOCT00016537001 | |
| 20992 chr1 manual_curation exon 33537093 33537153 . - . Parent=GSCOCT00016537001 | |
| 20993 chr1 manual_curation exon 33535604 33536998 . - . Parent=GSCOCT00016537001 | |
| 20994 chr1 manual_curation CDS 33539405 33539438 . - 0 Parent=GSCOCT00016537001 | |
| 20995 chr1 manual_curation CDS 33539033 33539295 . - 1 Parent=GSCOCT00016537001 | |
| 20996 chr1 manual_curation CDS 33538735 33538816 . - 0 Parent=GSCOCT00016537001 | |
| 20997 chr1 manual_curation CDS 33537260 33537333 . - 1 Parent=GSCOCT00016537001 | |
| 20998 chr1 manual_curation CDS 33537093 33537153 . - 0 Parent=GSCOCT00016537001 | |
| 20999 chr1 manual_curation CDS 33536856 33536998 . - 1 Parent=GSCOCT00016537001 | |
| 21000 chr1 manual_curation gene 33542411 33547955 . - . ID=GSCOCG00016536001;Name=Cc01_g15660 | |
| 21001 chr1 manual_curation mRNA 33542411 33547955 . - . ID=GSCOCT00016536001;Parent=GSCOCG00016536001;Name=Cc01_g15660 | |
| 21002 chr1 manual_curation polypeptide 33542742 33547716 . - . ID=GSCOCP00016536001;Dbxref=InterPro:IPR001925,PFAM:PF01459,SwissProt:Q6P825,SwissProt:Q9LHE5,SwissProt:Q9SX55,TAIR:AT1G50400.1,TAIR:AT3G20000.1,TrEMBL:A5ASV4,TrEMBL:D7TY71,TrEMBL:I1KQE2;Derives_from=GSCOCT00016536001;Name=Cc01_g15660;Ontology_term=CC_evidence_code:ISS,GO:0005741,GO:0006820,GO:0008308,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Mitochondrial import receptor subunit TOM40 homolog 1,CC_functional_completeness:complete,CC_gene:TOM40-1,CC_gene:TOM40-2,CC_gene:tomm40;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016536001~ Mitochondrial import receptor subunit TOM40 homolog 1~ TOM40-1~ complete;original_location=join(3703475..3703619%2C3704199..3704280%2C3704442..3704541%2C3704629..3704724%2C3704840..3704890%2C3705187..3705252%2C3705857..3705958%2C3707210..3707278%2C3707371..3707454%2C3708205..3708300%2C3708393..3708449);owner=coffea | |
| 21003 chr1 manual_curation exon 33547572 33547955 . - . Parent=GSCOCT00016536001 | |
| 21004 chr1 manual_curation exon 33546911 33546992 . - . Parent=GSCOCT00016536001 | |
| 21005 chr1 manual_curation exon 33546650 33546749 . - . Parent=GSCOCT00016536001 | |
| 21006 chr1 manual_curation exon 33546467 33546562 . - . Parent=GSCOCT00016536001 | |
| 21007 chr1 manual_curation exon 33546301 33546351 . - . Parent=GSCOCT00016536001 | |
| 21008 chr1 manual_curation exon 33545939 33546004 . - . Parent=GSCOCT00016536001 | |
| 21009 chr1 manual_curation exon 33545233 33545334 . - . Parent=GSCOCT00016536001 | |
| 21010 chr1 manual_curation exon 33543913 33543981 . - . Parent=GSCOCT00016536001 | |
| 21011 chr1 manual_curation exon 33543737 33543820 . - . Parent=GSCOCT00016536001 | |
| 21012 chr1 manual_curation exon 33542891 33542986 . - . Parent=GSCOCT00016536001 | |
| 21013 chr1 manual_curation exon 33542411 33542798 . - . Parent=GSCOCT00016536001 | |
| 21014 chr1 manual_curation CDS 33547572 33547716 . - 0 Parent=GSCOCT00016536001 | |
| 21015 chr1 manual_curation CDS 33546911 33546992 . - 1 Parent=GSCOCT00016536001 | |
| 21016 chr1 manual_curation CDS 33546650 33546749 . - 2 Parent=GSCOCT00016536001 | |
| 21017 chr1 manual_curation CDS 33546467 33546562 . - 0 Parent=GSCOCT00016536001 | |
| 21018 chr1 manual_curation CDS 33546301 33546351 . - 0 Parent=GSCOCT00016536001 | |
| 21019 chr1 manual_curation CDS 33545939 33546004 . - 0 Parent=GSCOCT00016536001 | |
| 21020 chr1 manual_curation CDS 33545233 33545334 . - 0 Parent=GSCOCT00016536001 | |
| 21021 chr1 manual_curation CDS 33543913 33543981 . - 0 Parent=GSCOCT00016536001 | |
| 21022 chr1 manual_curation CDS 33543737 33543820 . - 0 Parent=GSCOCT00016536001 | |
| 21023 chr1 manual_curation CDS 33542891 33542986 . - 0 Parent=GSCOCT00016536001 | |
| 21024 chr1 manual_curation CDS 33542742 33542798 . - 0 Parent=GSCOCT00016536001 | |
| 21025 chr1 manual_curation gene 33548892 33549847 . + . ID=GSCOCG00016535001;Name=Cc01_g15670 | |
| 21026 chr1 manual_curation mRNA 33548892 33549847 . + . ID=GSCOCT00016535001;Parent=GSCOCG00016535001;Name=Cc01_g15670 | |
| 21027 chr1 manual_curation polypeptide 33548892 33549847 . + . ID=GSCOCP00016535001;Derives_from=GSCOCT00016535001;Name=Cc01_g15670;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016535001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(3702277..3702299%2C3702112..3702221%2C3701344..3701513));owner=coffea | |
| 21028 chr1 manual_curation exon 33549678 33549847 . + . Parent=GSCOCT00016535001 | |
| 21029 chr1 manual_curation exon 33548970 33549079 . + . Parent=GSCOCT00016535001 | |
| 21030 chr1 manual_curation exon 33548892 33548914 . + . Parent=GSCOCT00016535001 | |
| 21031 chr1 manual_curation CDS 33549678 33549847 . + 1 Parent=GSCOCT00016535001 | |
| 21032 chr1 manual_curation CDS 33548970 33549079 . + 2 Parent=GSCOCT00016535001 | |
| 21033 chr1 manual_curation CDS 33548892 33548914 . + 0 Parent=GSCOCT00016535001 | |
| 21034 chr1 manual_curation gene 33550684 33554151 . + . ID=GSCOCG00016534001;Name=Cc01_g15680 | |
| 21035 chr1 manual_curation mRNA 33550684 33554151 . + . ID=GSCOCT00016534001;Parent=GSCOCG00016534001;Name=Cc01_g15680 | |
| 21036 chr1 manual_curation polypeptide 33550684 33553796 . + . ID=GSCOCP00016534001;Dbxref=InterPro:IPR006055,InterPro:IPR012337,InterPro:IPR013520,PFAM:PF00929,SMART:SM00479,SUPERFAMILY:SSF53098,SwissProt:Q9D8S4,SwissProt:Q9Y3B8,SwissProt:Q9ZVE0,TAIR:AT2G26970.1,TrEMBL:C6T5M9,TrEMBL:D7T1F5,TrEMBL:I1M796;Derives_from=GSCOCT00016534001;Name=Cc01_g15680;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0004527,GO:0005622,CC_EC_number:missing_EC_number,PRODUCT:Oligoribonuclease,CC_functional_completeness:fragment,CC_gene:At2g26970,CC_gene:Rexo2,CC_gene:REXO2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016534001~ Oligoribonuclease~ At2g26970~ fragment;original_location=complement(join(3700489..3700507%2C3698918..3698994%2C3698749..3698830%2C3698553..3698608%2C3698371..3698457%2C3697805..3697895%2C3697395..3697516));owner=coffea | |
| 21037 chr1 manual_curation exon 33553675 33554151 . + . Parent=GSCOCT00016534001 | |
| 21038 chr1 manual_curation exon 33553296 33553386 . + . Parent=GSCOCT00016534001 | |
| 21039 chr1 manual_curation exon 33552734 33552820 . + . Parent=GSCOCT00016534001 | |
| 21040 chr1 manual_curation exon 33552583 33552638 . + . Parent=GSCOCT00016534001 | |
| 21041 chr1 manual_curation exon 33552361 33552442 . + . Parent=GSCOCT00016534001 | |
| 21042 chr1 manual_curation exon 33552197 33552273 . + . Parent=GSCOCT00016534001 | |
| 21043 chr1 manual_curation exon 33550684 33550702 . + . Parent=GSCOCT00016534001 | |
| 21044 chr1 manual_curation CDS 33553675 33553796 . + 1 Parent=GSCOCT00016534001 | |
| 21045 chr1 manual_curation CDS 33553296 33553386 . + 0 Parent=GSCOCT00016534001 | |
| 21046 chr1 manual_curation CDS 33552734 33552820 . + 0 Parent=GSCOCT00016534001 | |
| 21047 chr1 manual_curation CDS 33552583 33552638 . + 1 Parent=GSCOCT00016534001 | |
| 21048 chr1 manual_curation CDS 33552361 33552442 . + 0 Parent=GSCOCT00016534001 | |
| 21049 chr1 manual_curation CDS 33552197 33552273 . + 1 Parent=GSCOCT00016534001 | |
| 21050 chr1 manual_curation CDS 33550684 33550702 . + 0 Parent=GSCOCT00016534001 | |
| 21051 chr1 manual_curation gene 33555295 33560004 . - . ID=GSCOCG00016533001;Name=Cc01_g15690 | |
| 21052 chr1 manual_curation mRNA 33555295 33560004 . - . ID=GSCOCT00016533001;Parent=GSCOCG00016533001;Name=Cc01_g15690 | |
| 21053 chr1 manual_curation polypeptide 33555808 33559656 . - . ID=GSCOCP00016533001;Dbxref=GENE3D:G3DSA:1.10.1040.10,GENE3D:G3DSA:3.40.50.720,InterPro:IPR002204,InterPro:IPR006115,InterPro:IPR006183,InterPro:IPR008927,InterPro:IPR013328,InterPro:IPR015815,InterPro:IPR016040,PANTHER:PTHR22981,PFAM:PF03446,PRINTS:PR00076,PROSITE:PS00895,SUPERFAMILY:SSF48179,SwissProt:A4FUF0,SwissProt:Q5RKH0,SwissProt:Q5ZLS7,TAIR:AT1G17650.1,TAIR:AT3G25530.1,TAIR:AT4G29120.1,TrEMBL:A5BEM8,TrEMBL:I1KHZ3,TrEMBL:I1MKN2;Derives_from=GSCOCT00016533001;Name=Cc01_g15690;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004616,GO:0005488,GO:0006098,GO:0006573,GO:0008152,GO:0008442,GO:0016491,GO:0050662,GO:0055114,CC_EC_number:1.1.1.31,CC_EC_number:1.1.1.31,CC_EC_number:1.1.1.31,PRODUCT:Putative oxidoreductase GLYR1,CC_functional_completeness:fragment,CC_gene:GLYR1,CC_gene:Glyr1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016533001~ Putative oxidoreductase GLYR1~ GLYR1~ fragment;original_location=join(3691535..3691645%2C3692322..3692432%2C3692527..3692628%2C3692871..3692972%2C3693519..3693634%2C3694709..3694787%2C3694863..3695033%2C3695300..3695383);owner=coffea | |
| 21054 chr1 manual_curation exon 33559546 33560004 . - . Parent=GSCOCT00016533001 | |
| 21055 chr1 manual_curation exon 33558759 33558869 . - . Parent=GSCOCT00016533001 | |
| 21056 chr1 manual_curation exon 33558563 33558664 . - . Parent=GSCOCT00016533001 | |
| 21057 chr1 manual_curation exon 33558219 33558320 . - . Parent=GSCOCT00016533001 | |
| 21058 chr1 manual_curation exon 33557557 33557672 . - . Parent=GSCOCT00016533001 | |
| 21059 chr1 manual_curation exon 33556404 33556482 . - . Parent=GSCOCT00016533001 | |
| 21060 chr1 manual_curation exon 33556158 33556328 . - . Parent=GSCOCT00016533001 | |
| 21061 chr1 manual_curation exon 33555295 33555891 . - . Parent=GSCOCT00016533001 | |
| 21062 chr1 manual_curation CDS 33559546 33559656 . - 0 Parent=GSCOCT00016533001 | |
| 21063 chr1 manual_curation CDS 33558759 33558869 . - 0 Parent=GSCOCT00016533001 | |
| 21064 chr1 manual_curation CDS 33558563 33558664 . - 0 Parent=GSCOCT00016533001 | |
| 21065 chr1 manual_curation CDS 33558219 33558320 . - 0 Parent=GSCOCT00016533001 | |
| 21066 chr1 manual_curation CDS 33557557 33557672 . - 0 Parent=GSCOCT00016533001 | |
| 21067 chr1 manual_curation CDS 33556404 33556482 . - 2 Parent=GSCOCT00016533001 | |
| 21068 chr1 manual_curation CDS 33556158 33556328 . - 0 Parent=GSCOCT00016533001 | |
| 21069 chr1 manual_curation CDS 33555808 33555891 . - 0 Parent=GSCOCT00016533001 | |
| 21070 chr1 manual_curation gene 33563861 33568626 . + . ID=GSCOCG00016532001;Name=Cc01_g15700 | |
| 21071 chr1 manual_curation mRNA 33563861 33568626 . + . ID=GSCOCT00016532001;Parent=GSCOCG00016532001;Name=Cc01_g15700 | |
| 21072 chr1 manual_curation polypeptide 33563908 33568626 . + . ID=GSCOCP00016532001;Dbxref=InterPro:IPR004326,PFAM:PF03094,SwissProt:O49621,SwissProt:O80580,SwissProt:Q94KB2,TAIR:AT2G44110.2,TAIR:AT4G02600.1,TAIR:AT4G24250.1,TrEMBL:A9PJ36,TrEMBL:I1JSC7,TrEMBL:I1K6X1;Derives_from=GSCOCT00016532001;Name=Cc01_g15700;Ontology_term=CC_evidence_code:ISS,GO:0008219,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:MLO-like protein 1,CC_functional_completeness:complete,CC_gene:MLO1,CC_gene:MLO15,CC_gene:MLO13;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016532001~ MLO-like protein 1~ MLO1~ complete;original_location=complement(join(3687155..3687283%2C3686755..3686812%2C3686381..3686589%2C3685840..3685956%2C3685698..3685758%2C3685225..3685319%2C3684418..3684492%2C3684280..3684317%2C3684038..3684087%2C3683660..3683700%2C3683193..3683402%2C3683039..3683106%2C3682859..3682919%2C3682565..3682759));owner=coffea | |
| 21073 chr1 manual_curation exon 33568432 33568626 . + . Parent=GSCOCT00016532001 | |
| 21074 chr1 manual_curation exon 33568272 33568332 . + . Parent=GSCOCT00016532001 | |
| 21075 chr1 manual_curation exon 33568085 33568152 . + . Parent=GSCOCT00016532001 | |
| 21076 chr1 manual_curation exon 33567789 33567998 . + . Parent=GSCOCT00016532001 | |
| 21077 chr1 manual_curation exon 33567491 33567531 . + . Parent=GSCOCT00016532001 | |
| 21078 chr1 manual_curation exon 33567104 33567153 . + . Parent=GSCOCT00016532001 | |
| 21079 chr1 manual_curation exon 33566874 33566911 . + . Parent=GSCOCT00016532001 | |
| 21080 chr1 manual_curation exon 33566699 33566773 . + . Parent=GSCOCT00016532001 | |
| 21081 chr1 manual_curation exon 33565872 33565966 . + . Parent=GSCOCT00016532001 | |
| 21082 chr1 manual_curation exon 33565433 33565493 . + . Parent=GSCOCT00016532001 | |
| 21083 chr1 manual_curation exon 33565235 33565351 . + . Parent=GSCOCT00016532001 | |
| 21084 chr1 manual_curation exon 33564602 33564810 . + . Parent=GSCOCT00016532001 | |
| 21085 chr1 manual_curation exon 33564379 33564436 . + . Parent=GSCOCT00016532001 | |
| 21086 chr1 manual_curation exon 33563861 33564036 . + . Parent=GSCOCT00016532001 | |
| 21087 chr1 manual_curation CDS 33568432 33568626 . + 0 Parent=GSCOCT00016532001 | |
| 21088 chr1 manual_curation CDS 33568272 33568332 . + 2 Parent=GSCOCT00016532001 | |
| 21089 chr1 manual_curation CDS 33568085 33568152 . + 0 Parent=GSCOCT00016532001 | |
| 21090 chr1 manual_curation CDS 33567789 33567998 . + 0 Parent=GSCOCT00016532001 | |
| 21091 chr1 manual_curation CDS 33567491 33567531 . + 1 Parent=GSCOCT00016532001 | |
| 21092 chr1 manual_curation CDS 33567104 33567153 . + 2 Parent=GSCOCT00016532001 | |
| 21093 chr1 manual_curation CDS 33566874 33566911 . + 0 Parent=GSCOCT00016532001 | |
| 21094 chr1 manual_curation CDS 33566699 33566773 . + 0 Parent=GSCOCT00016532001 | |
| 21095 chr1 manual_curation CDS 33565872 33565966 . + 1 Parent=GSCOCT00016532001 | |
| 21096 chr1 manual_curation CDS 33565433 33565493 . + 0 Parent=GSCOCT00016532001 | |
| 21097 chr1 manual_curation CDS 33565235 33565351 . + 0 Parent=GSCOCT00016532001 | |
| 21098 chr1 manual_curation CDS 33564602 33564810 . + 1 Parent=GSCOCT00016532001 | |
| 21099 chr1 manual_curation CDS 33564379 33564436 . + 0 Parent=GSCOCT00016532001 | |
| 21100 chr1 manual_curation CDS 33563908 33564036 . + 0 Parent=GSCOCT00016532001 | |
| 21101 chr1 manual_curation gene 33570800 33574410 . + . ID=GSCOCG00016530001;Name=Cc01_g15710 | |
| 21102 chr1 manual_curation mRNA 33570800 33574410 . + . ID=GSCOCT00016530001;Parent=GSCOCG00016530001;Name=Cc01_g15710 | |
| 21103 chr1 manual_curation polypeptide 33570800 33574146 . + . ID=GSCOCP00016530001;Dbxref=GENE3D:G3DSA:3.90.79.10,InterPro:IPR000086,InterPro:IPR003265,InterPro:IPR011257,InterPro:IPR015797,PFAM:PF00730,SMART:SM00478,SUPERFAMILY:SSF48150,SUPERFAMILY:SSF55811,SwissProt:Q8R5G2,SwissProt:Q99P21,SwissProt:Q9UIF7,TAIR:AT4G12740.1,TrEMBL:A5ATF5,TrEMBL:B9IAY3,TrEMBL:D7T597;Derives_from=GSCOCT00016530001;Name=Cc01_g15710;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0006281,GO:0006284,GO:0016787,CC_EC_number:missing_EC_number,PRODUCT:Putative A/G-specific adenine DNA glycosylase,CC_functional_completeness:complete,CC_gene:Mutyh,CC_gene:MUTYH;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016530001~ Putative A/G-specific adenine DNA glycosylase~ Mutyh~ complete;original_location=complement(join(3679879..3680391%2C3679743..3679802%2C3679104..3679223%2C3678929..3679026%2C3677885..3678426%2C3677671..3677777%2C3677045..3677146));owner=coffea | |
| 21104 chr1 manual_curation exon 33574045 33574410 . + . Parent=GSCOCT00016530001 | |
| 21105 chr1 manual_curation exon 33573414 33573520 . + . Parent=GSCOCT00016530001 | |
| 21106 chr1 manual_curation exon 33572765 33573306 . + . Parent=GSCOCT00016530001 | |
| 21107 chr1 manual_curation exon 33572165 33572262 . + . Parent=GSCOCT00016530001 | |
| 21108 chr1 manual_curation exon 33571968 33572087 . + . Parent=GSCOCT00016530001 | |
| 21109 chr1 manual_curation exon 33571389 33571448 . + . Parent=GSCOCT00016530001 | |
| 21110 chr1 manual_curation exon 33570800 33571312 . + . Parent=GSCOCT00016530001 | |
| 21111 chr1 manual_curation CDS 33574045 33574146 . + 0 Parent=GSCOCT00016530001 | |
| 21112 chr1 manual_curation CDS 33573414 33573520 . + 1 Parent=GSCOCT00016530001 | |
| 21113 chr1 manual_curation CDS 33572765 33573306 . + 2 Parent=GSCOCT00016530001 | |
| 21114 chr1 manual_curation CDS 33572165 33572262 . + 0 Parent=GSCOCT00016530001 | |
| 21115 chr1 manual_curation CDS 33571968 33572087 . + 0 Parent=GSCOCT00016530001 | |
| 21116 chr1 manual_curation CDS 33571389 33571448 . + 0 Parent=GSCOCT00016530001 | |
| 21117 chr1 manual_curation CDS 33570800 33571312 . + 0 Parent=GSCOCT00016530001 | |
| 21118 chr1 manual_curation gene 33575096 33577237 . + . ID=GSCOCG00016529001;Name=Cc01_g15720 | |
| 21119 chr1 manual_curation mRNA 33575096 33577237 . + . ID=GSCOCT00016529001;Parent=GSCOCG00016529001;Name=Cc01_g15720 | |
| 21120 chr1 manual_curation polypeptide 33575455 33576598 . + . ID=GSCOCP00016529001;Dbxref=InterPro:IPR021374,PFAM:PF11210,TAIR:AT2G04039.3,TrEMBL:B9GTF4,TrEMBL:G7ZYU9,TrEMBL:I1MKM9;Derives_from=GSCOCT00016529001;Name=Cc01_g15720;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016529001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=complement(join(3675638..3675736%2C3675449..3675530%2C3675045..3675268%2C3674847..3674919%2C3674593..3674747));owner=coffea | |
| 21121 chr1 manual_curation exon 33576444 33577237 . + . Parent=GSCOCT00016529001 | |
| 21122 chr1 manual_curation exon 33576272 33576344 . + . Parent=GSCOCT00016529001 | |
| 21123 chr1 manual_curation exon 33575923 33576146 . + . Parent=GSCOCT00016529001 | |
| 21124 chr1 manual_curation exon 33575661 33575742 . + . Parent=GSCOCT00016529001 | |
| 21125 chr1 manual_curation exon 33575096 33575553 . + . Parent=GSCOCT00016529001 | |
| 21126 chr1 manual_curation CDS 33576444 33576598 . + 1 Parent=GSCOCT00016529001 | |
| 21127 chr1 manual_curation CDS 33576272 33576344 . + 0 Parent=GSCOCT00016529001 | |
| 21128 chr1 manual_curation CDS 33575923 33576146 . + 1 Parent=GSCOCT00016529001 | |
| 21129 chr1 manual_curation CDS 33575661 33575742 . + 0 Parent=GSCOCT00016529001 | |
| 21130 chr1 manual_curation CDS 33575455 33575553 . + 0 Parent=GSCOCT00016529001 | |
| 21131 chr1 manual_curation gene 33577300 33581347 . - . ID=GSCOCG00016528001;Name=Cc01_g15730 | |
| 21132 chr1 manual_curation mRNA 33577300 33581347 . - . ID=GSCOCT00016528001;Parent=GSCOCG00016528001;Name=Cc01_g15730 | |
| 21133 chr1 manual_curation polypeptide 33577528 33580934 . - . ID=GSCOCP00016528001;Dbxref=TAIR:AT5G48335.1,TrEMBL:B9IAY0,TrEMBL:B9SEZ9,TrEMBL:D7T5A0;Derives_from=GSCOCT00016528001;Name=Cc01_g15730;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016528001~ Putative unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G07580.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(3670257..3670336%2C3670515..3670549%2C3672310..3672498%2C3672862..3672912%2C3673423..3673484%2C3673568..3673663);owner=coffea | |
| 21134 chr1 manual_curation exon 33580855 33581347 . - . Parent=GSCOCT00016528001 | |
| 21135 chr1 manual_curation exon 33580642 33580676 . - . Parent=GSCOCT00016528001 | |
| 21136 chr1 manual_curation exon 33578693 33578881 . - . Parent=GSCOCT00016528001 | |
| 21137 chr1 manual_curation exon 33578279 33578329 . - . Parent=GSCOCT00016528001 | |
| 21138 chr1 manual_curation exon 33577707 33577768 . - . Parent=GSCOCT00016528001 | |
| 21139 chr1 manual_curation exon 33577300 33577623 . - . Parent=GSCOCT00016528001 | |
| 21140 chr1 manual_curation CDS 33580855 33580934 . - 0 Parent=GSCOCT00016528001 | |
| 21141 chr1 manual_curation CDS 33580642 33580676 . - 2 Parent=GSCOCT00016528001 | |
| 21142 chr1 manual_curation CDS 33578693 33578881 . - 1 Parent=GSCOCT00016528001 | |
| 21143 chr1 manual_curation CDS 33578279 33578329 . - 1 Parent=GSCOCT00016528001 | |
| 21144 chr1 manual_curation CDS 33577707 33577768 . - 1 Parent=GSCOCT00016528001 | |
| 21145 chr1 manual_curation CDS 33577528 33577623 . - 0 Parent=GSCOCT00016528001 | |
| 21146 chr1 manual_curation gene 33583771 33587457 . + . ID=GSCOCG00016527001;Name=Cc01_g15740 | |
| 21147 chr1 manual_curation mRNA 33583771 33587457 . + . ID=GSCOCT00016527001;Parent=GSCOCG00016527001;Name=Cc01_g15740 | |
| 21148 chr1 manual_curation polypeptide 33583771 33587314 . + . ID=GSCOCP00016527001;Dbxref=TAIR:AT4G12760.1,TrEMBL:B9IAY9,TrEMBL:B9SF04,TrEMBL:F4JRF6;Derives_from=GSCOCT00016527001;Name=Cc01_g15740;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B Has 30201 Blast hits to 17322 proteins in 780 species,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016527001~ unknown protein%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(3667322..3667420%2C3667070..3667168%2C3665881..3666109%2C3665425..3665516%2C3665217..3665324%2C3663877..3664038));owner=coffea | |
| 21149 chr1 manual_curation exon 33587153 33587457 . + . Parent=GSCOCT00016527001 | |
| 21150 chr1 manual_curation exon 33585867 33585974 . + . Parent=GSCOCT00016527001 | |
| 21151 chr1 manual_curation exon 33585675 33585766 . + . Parent=GSCOCT00016527001 | |
| 21152 chr1 manual_curation exon 33585082 33585310 . + . Parent=GSCOCT00016527001 | |
| 21153 chr1 manual_curation exon 33584023 33584121 . + . Parent=GSCOCT00016527001 | |
| 21154 chr1 manual_curation exon 33583771 33583869 . + . Parent=GSCOCT00016527001 | |
| 21155 chr1 manual_curation CDS 33587153 33587314 . + 0 Parent=GSCOCT00016527001 | |
| 21156 chr1 manual_curation CDS 33585867 33585974 . + 0 Parent=GSCOCT00016527001 | |
| 21157 chr1 manual_curation CDS 33585675 33585766 . + 1 Parent=GSCOCT00016527001 | |
| 21158 chr1 manual_curation CDS 33585082 33585310 . + 0 Parent=GSCOCT00016527001 | |
| 21159 chr1 manual_curation CDS 33584023 33584121 . + 0 Parent=GSCOCT00016527001 | |
| 21160 chr1 manual_curation CDS 33583771 33583869 . + 0 Parent=GSCOCT00016527001 | |
| 21161 chr1 manual_curation gene 33599926 33608403 . - . ID=GSCOCG00016524001;Name=Cc01_g15750 | |
| 21162 chr1 manual_curation mRNA 33599926 33608403 . - . ID=GSCOCT00016524001;Parent=GSCOCG00016524001;Name=Cc01_g15750 | |
| 21163 chr1 manual_curation polypeptide 33600536 33607829 . - . ID=GSCOCP00016524001;Dbxref=GENE3D:G3DSA:1.10.287.110,InterPro:IPR001623,SUPERFAMILY:SSF46565,SwissProt:O13773,SwissProt:Q0WQ57,SwissProt:Q9SU08,TAIR:AT1G21660.1,TAIR:AT4G12770.1,TAIR:AT4G12780.1,TrEMBL:B9IAZ0,TrEMBL:I1IHQ2,TrEMBL:I1K518;Derives_from=GSCOCT00016524001;Name=Cc01_g15750;Ontology_term=CC_evidence_code:ISS,GO:0031072,CC_EC_number:missing_EC_number,PRODUCT:Putative Auxilin-related protein 2,CC_functional_completeness:complete,CC_gene:At4g12770,CC_gene:At4g12780,CC_gene:ucp7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016524001~ Putative Auxilin-related protein 2~ At4g12770~ complete;original_location=join(3643362..3644056%2C3645416..3647084%2C3647188..3647329%2C3647421..3647515%2C3647827..3647892%2C3648529..3648618%2C3649963..3650139%2C3650617..3650655);owner=coffea | |
| 21164 chr1 manual_curation exon 33607135 33608403 . - . Parent=GSCOCT00016524001 | |
| 21165 chr1 manual_curation exon 33604107 33605775 . - . Parent=GSCOCT00016524001 | |
| 21166 chr1 manual_curation exon 33603862 33604003 . - . Parent=GSCOCT00016524001 | |
| 21167 chr1 manual_curation exon 33603676 33603770 . - . Parent=GSCOCT00016524001 | |
| 21168 chr1 manual_curation exon 33603299 33603364 . - . Parent=GSCOCT00016524001 | |
| 21169 chr1 manual_curation exon 33602573 33602662 . - . Parent=GSCOCT00016524001 | |
| 21170 chr1 manual_curation exon 33601052 33601228 . - . Parent=GSCOCT00016524001 | |
| 21171 chr1 manual_curation exon 33599926 33600574 . - . Parent=GSCOCT00016524001 | |
| 21172 chr1 manual_curation CDS 33607135 33607829 . - 0 Parent=GSCOCT00016524001 | |
| 21173 chr1 manual_curation CDS 33604107 33605775 . - 2 Parent=GSCOCT00016524001 | |
| 21174 chr1 manual_curation CDS 33603862 33604003 . - 0 Parent=GSCOCT00016524001 | |
| 21175 chr1 manual_curation CDS 33603676 33603770 . - 1 Parent=GSCOCT00016524001 | |
| 21176 chr1 manual_curation CDS 33603299 33603364 . - 0 Parent=GSCOCT00016524001 | |
| 21177 chr1 manual_curation CDS 33602573 33602662 . - 0 Parent=GSCOCT00016524001 | |
| 21178 chr1 manual_curation CDS 33601052 33601228 . - 0 Parent=GSCOCT00016524001 | |
| 21179 chr1 manual_curation CDS 33600536 33600574 . - 0 Parent=GSCOCT00016524001 | |
| 21180 chr1 manual_curation gene 33614684 33618600 . - . ID=GSCOCG00016523001;Name=Cc01_g15760 | |
| 21181 chr1 manual_curation mRNA 33614684 33618600 . - . ID=GSCOCT00016523001;Parent=GSCOCG00016523001;Name=Cc01_g15760 | |
| 21182 chr1 manual_curation polypeptide 33614862 33618337 . - . ID=GSCOCP00016523001;Dbxref=InterPro:IPR004877,InterPro:IPR005018,InterPro:IPR006593,InterPro:IPR013050,PFAM:PF03188,PFAM:PF03351,PROFILE:PS50836,PROFILE:PS50939,SMART:SM00664,SMART:SM00665,TAIR:AT3G07570.1,TAIR:AT3G61750.1,TAIR:AT5G47530.1,TrEMBL:B9IAZ1,TrEMBL:I1KHY9,TrEMBL:I1MKM7;Derives_from=GSCOCT00016523001;Name=Cc01_g15760;Ontology_term=CC_evidence_code:ISS,GO:0004500,GO:0006548,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Cytochrome b561/ferric reductase transmembrane with DOMON related domain,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016523001~ Cytochrome b561/ferric reductase transmembrane with DOMON related domain~ unknown_gene~ complete;original_location=join(3632854..3633003%2C3633099..3633498%2C3635685..3635971%2C3636099..3636329);owner=coffea | |
| 21183 chr1 manual_curation exon 33618188 33618600 . - . Parent=GSCOCT00016523001 | |
| 21184 chr1 manual_curation exon 33617693 33618092 . - . Parent=GSCOCT00016523001 | |
| 21185 chr1 manual_curation exon 33615220 33615506 . - . Parent=GSCOCT00016523001 | |
| 21186 chr1 manual_curation exon 33614684 33615092 . - . Parent=GSCOCT00016523001 | |
| 21187 chr1 manual_curation CDS 33618188 33618337 . - 0 Parent=GSCOCT00016523001 | |
| 21188 chr1 manual_curation CDS 33617693 33618092 . - 0 Parent=GSCOCT00016523001 | |
| 21189 chr1 manual_curation CDS 33615220 33615506 . - 1 Parent=GSCOCT00016523001 | |
| 21190 chr1 manual_curation CDS 33614862 33615092 . - 0 Parent=GSCOCT00016523001 | |
| 21191 chr1 manual_curation gene 33619918 33630766 . - . ID=GSCOCG00016522001;Name=Cc01_g15770 | |
| 21192 chr1 manual_curation mRNA 33619918 33630766 . - . ID=GSCOCT00016522001;Parent=GSCOCG00016522001;Name=Cc01_g15770 | |
| 21193 chr1 manual_curation polypeptide 33620412 33630483 . - . ID=GSCOCP00016522001;Dbxref=InterPro:IPR001394,InterPro:IPR006615,InterPro:IPR018200,PFAM:PF00443,PFAM:PF06337,PROFILE:PS50235,PROFILE:PS51283,PROSITE:PS00972,PROSITE:PS00973,SMART:SM00695,SwissProt:O22207,SwissProt:Q93Y01,SwissProt:Q9ZSB5,TAIR:AT2G40930.1,TAIR:AT4G10570.1,TAIR:AT4G10590.2,TrEMBL:B9HDU9,TrEMBL:B9SWA7,TrEMBL:D7U6B4;Derives_from=GSCOCT00016522001;Name=Cc01_g15770;Ontology_term=CC_evidence_code:ISS,GO:0004221,GO:0006511,CC_EC_number:3.1.2.15,PRODUCT:Ubiquitin carboxyl-terminal hydrolase 5,CC_functional_completeness:complete,CC_gene:UBP5,CC_gene:UBP10,CC_gene:UBP9;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016522001~ Ubiquitin carboxyl-terminal hydrolase 5~ UBP5~ complete;original_location=join(3620708..3620826%2C3621907..3622158%2C3623505..3623649%2C3623787..3623846%2C3623940..3624035%2C3625773..3626162%2C3627202..3627342%2C3627418..3627588%2C3628272..3628529%2C3628653..3628801%2C3629113..3629688%2C3629892..3630165%2C3630633..3630779);owner=coffea | |
| 21194 chr1 manual_curation exon 33630365 33630766 . - . Parent=GSCOCT00016522001 | |
| 21195 chr1 manual_curation exon 33629033 33629284 . - . Parent=GSCOCT00016522001 | |
| 21196 chr1 manual_curation exon 33627542 33627686 . - . Parent=GSCOCT00016522001 | |
| 21197 chr1 manual_curation exon 33627345 33627404 . - . Parent=GSCOCT00016522001 | |
| 21198 chr1 manual_curation exon 33627156 33627251 . - . Parent=GSCOCT00016522001 | |
| 21199 chr1 manual_curation exon 33625029 33625418 . - . Parent=GSCOCT00016522001 | |
| 21200 chr1 manual_curation exon 33623849 33623989 . - . Parent=GSCOCT00016522001 | |
| 21201 chr1 manual_curation exon 33623603 33623773 . - . Parent=GSCOCT00016522001 | |
| 21202 chr1 manual_curation exon 33622662 33622919 . - . Parent=GSCOCT00016522001 | |
| 21203 chr1 manual_curation exon 33622390 33622538 . - . Parent=GSCOCT00016522001 | |
| 21204 chr1 manual_curation exon 33621503 33622078 . - . Parent=GSCOCT00016522001 | |
| 21205 chr1 manual_curation exon 33621026 33621299 . - . Parent=GSCOCT00016522001 | |
| 21206 chr1 manual_curation exon 33619918 33620558 . - . Parent=GSCOCT00016522001 | |
| 21207 chr1 manual_curation CDS 33630365 33630483 . - 0 Parent=GSCOCT00016522001 | |
| 21208 chr1 manual_curation CDS 33629033 33629284 . - 2 Parent=GSCOCT00016522001 | |
| 21209 chr1 manual_curation CDS 33627542 33627686 . - 2 Parent=GSCOCT00016522001 | |
| 21210 chr1 manual_curation CDS 33627345 33627404 . - 0 Parent=GSCOCT00016522001 | |
| 21211 chr1 manual_curation CDS 33627156 33627251 . - 0 Parent=GSCOCT00016522001 | |
| 21212 chr1 manual_curation CDS 33625029 33625418 . - 0 Parent=GSCOCT00016522001 | |
| 21213 chr1 manual_curation CDS 33623849 33623989 . - 0 Parent=GSCOCT00016522001 | |
| 21214 chr1 manual_curation CDS 33623603 33623773 . - 0 Parent=GSCOCT00016522001 | |
| 21215 chr1 manual_curation CDS 33622662 33622919 . - 0 Parent=GSCOCT00016522001 | |
| 21216 chr1 manual_curation CDS 33622390 33622538 . - 0 Parent=GSCOCT00016522001 | |
| 21217 chr1 manual_curation CDS 33621503 33622078 . - 2 Parent=GSCOCT00016522001 | |
| 21218 chr1 manual_curation CDS 33621026 33621299 . - 2 Parent=GSCOCT00016522001 | |
| 21219 chr1 manual_curation CDS 33620412 33620558 . - 0 Parent=GSCOCT00016522001 | |
| 21220 chr1 manual_curation gene 33631614 33637099 . - . ID=GSCOCG00016521001;Name=Cc01_g15780 | |
| 21221 chr1 manual_curation mRNA 33631614 33637099 . - . ID=GSCOCT00016521001;Parent=GSCOCG00016521001;Name=Cc01_g15780 | |
| 21222 chr1 manual_curation polypeptide 33631971 33636781 . - . ID=GSCOCP00016521001;Dbxref=InterPro:IPR022228,PFAM:PF12579,TAIR:AT1G10820.2,TAIR:AT1G60670.2,TAIR:AT3G07565.4,TrEMBL:D7L6M2,TrEMBL:F6GX47,TrEMBL:Q84WV3;Derives_from=GSCOCT00016521001;Name=Cc01_g15780;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF3755),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016521001~ Protein of unknown function (DUF3755)~ unknown_gene~ complete;original_location=join(3614410..3614648%2C3615801..3615900%2C3616471..3616536%2C3617525..3617636%2C3617791..3617873%2C3618493..3618554%2C3619109..3619220);owner=coffea | |
| 21223 chr1 manual_curation exon 33636543 33637099 . - . Parent=GSCOCT00016521001 | |
| 21224 chr1 manual_curation exon 33635291 33635390 . - . Parent=GSCOCT00016521001 | |
| 21225 chr1 manual_curation exon 33634655 33634720 . - . Parent=GSCOCT00016521001 | |
| 21226 chr1 manual_curation exon 33633555 33633666 . - . Parent=GSCOCT00016521001 | |
| 21227 chr1 manual_curation exon 33633318 33633400 . - . Parent=GSCOCT00016521001 | |
| 21228 chr1 manual_curation exon 33632637 33632698 . - . Parent=GSCOCT00016521001 | |
| 21229 chr1 manual_curation exon 33631614 33632082 . - . Parent=GSCOCT00016521001 | |
| 21230 chr1 manual_curation CDS 33636543 33636781 . - 0 Parent=GSCOCT00016521001 | |
| 21231 chr1 manual_curation CDS 33635291 33635390 . - 2 Parent=GSCOCT00016521001 | |
| 21232 chr1 manual_curation CDS 33634655 33634720 . - 0 Parent=GSCOCT00016521001 | |
| 21233 chr1 manual_curation CDS 33633555 33633666 . - 0 Parent=GSCOCT00016521001 | |
| 21234 chr1 manual_curation CDS 33633318 33633400 . - 1 Parent=GSCOCT00016521001 | |
| 21235 chr1 manual_curation CDS 33632637 33632698 . - 0 Parent=GSCOCT00016521001 | |
| 21236 chr1 manual_curation CDS 33631971 33632082 . - 2 Parent=GSCOCT00016521001 | |
| 21237 chr1 manual_curation gene 33657247 33661776 . + . ID=GSCOCG00016517001;Name=Cc01_g15790 | |
| 21238 chr1 manual_curation mRNA 33657247 33661776 . + . ID=GSCOCT00016517001;Parent=GSCOCG00016517001;Name=Cc01_g15790 | |
| 21239 chr1 manual_curation polypeptide 33657247 33661776 . + . ID=GSCOCP00016517001;Dbxref=InterPro:IPR003104,InterPro:IPR015425,PFAM:PF02181,PROFILE:PS51444,SMART:SM00498,SUPERFAMILY:SSF101447,SwissProt:O22824,SwissProt:Q8S0F0,SwissProt:Q9SE97,TAIR:AT2G43800.1,TAIR:AT3G25500.1,TAIR:AT5G67470.1,TrEMBL:B9T2I5,TrEMBL:I1KHY1,TrEMBL:Q9SDN6;Derives_from=GSCOCT00016517001;Name=Cc01_g15790;Ontology_term=CC_evidence_code:ISS,GO:0003779,GO:0016043,GO:0030036,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterized protein,CC_functional_completeness:modules,CC_gene:FH1,CC_gene:FH2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016517001~ Uncharacterized protein~ FH1~ modules;original_location=complement(join(3592191..3593944%2C3591878..3592077%2C3591025..3591269%2C3589415..3590221));owner=coffea | |
| 21240 chr1 manual_curation exon 33660970 33661776 . + . Parent=GSCOCT00016517001 | |
| 21241 chr1 manual_curation exon 33659922 33660166 . + . Parent=GSCOCT00016517001 | |
| 21242 chr1 manual_curation exon 33659114 33659313 . + . Parent=GSCOCT00016517001 | |
| 21243 chr1 manual_curation exon 33657247 33659000 . + . Parent=GSCOCT00016517001 | |
| 21244 chr1 manual_curation CDS 33660970 33661776 . + 0 Parent=GSCOCT00016517001 | |
| 21245 chr1 manual_curation CDS 33659922 33660166 . + 1 Parent=GSCOCT00016517001 | |
| 21246 chr1 manual_curation CDS 33659114 33659313 . + 2 Parent=GSCOCT00016517001 | |
| 21247 chr1 manual_curation CDS 33657247 33659000 . + 0 Parent=GSCOCT00016517001 | |
| 21248 chr1 manual_curation gene 33662603 33667469 . - . ID=GSCOCG00016516001;Name=Cc01_g15800 | |
| 21249 chr1 manual_curation mRNA 33662603 33667469 . - . ID=GSCOCT00016516001;Parent=GSCOCG00016516001;Name=Cc01_g15800 | |
| 21250 chr1 manual_curation polypeptide 33663121 33666887 . - . ID=GSCOCP00016516001;Dbxref=InterPro:IPR006683,PFAM:PF03061,SwissProt:Q32MW3,SwissProt:Q9R0X4,SwissProt:Q9Y305,TAIR:AT2G30720.1,TAIR:AT5G48370.1,TrEMBL:B9IB03,TrEMBL:B9T2I4,TrEMBL:F6HCR4;Derives_from=GSCOCT00016516001;Name=Cc01_g15800;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Acyl-coenzyme A thioesterase 9%2C mitochondrial,CC_functional_completeness:fragment,CC_gene:Acot9,CC_gene:ACOT9,CC_gene:Acot10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016516001~ Putative Acyl-coenzyme A thioesterase 9%2C mitochondrial~ Acot9~ fragment;original_location=join(3584304..3584561%2C3585369..3585546%2C3586770..3587239%2C3587558..3587686%2C3587909..3588070);owner=coffea | |
| 21251 chr1 manual_curation exon 33666630 33667469 . - . Parent=GSCOCT00016516001 | |
| 21252 chr1 manual_curation exon 33665645 33665822 . - . Parent=GSCOCT00016516001 | |
| 21253 chr1 manual_curation exon 33663952 33664421 . - . Parent=GSCOCT00016516001 | |
| 21254 chr1 manual_curation exon 33663505 33663633 . - . Parent=GSCOCT00016516001 | |
| 21255 chr1 manual_curation exon 33662603 33663282 . - . Parent=GSCOCT00016516001 | |
| 21256 chr1 manual_curation CDS 33666630 33666887 . - 0 Parent=GSCOCT00016516001 | |
| 21257 chr1 manual_curation CDS 33665645 33665822 . - 0 Parent=GSCOCT00016516001 | |
| 21258 chr1 manual_curation CDS 33663952 33664421 . - 1 Parent=GSCOCT00016516001 | |
| 21259 chr1 manual_curation CDS 33663505 33663633 . - 0 Parent=GSCOCT00016516001 | |
| 21260 chr1 manual_curation CDS 33663121 33663282 . - 0 Parent=GSCOCT00016516001 | |
| 21261 chr1 manual_curation gene 33668550 33670200 . + . ID=GSCOCG00016515001;Name=Cc01_g15810 | |
| 21262 chr1 manual_curation mRNA 33668550 33670200 . + . ID=GSCOCT00016515001;Parent=GSCOCG00016515001;Name=Cc01_g15810 | |
| 21263 chr1 manual_curation polypeptide 33668654 33670200 . + . ID=GSCOCP00016515001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,PROSITE:PS00375,SwissProt:O22820,SwissProt:O22822,SwissProt:Q9SYK9,TAIR:AT1G05680.1,TAIR:AT2G43820.1,TAIR:AT2G43840.2,TrEMBL:B9T2H3,TrEMBL:C6KI44,TrEMBL:F6HRI4;Derives_from=GSCOCT00016515001;Name=Cc01_g15810;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.121,PRODUCT:UDP-glycosyltransferase 74F1,CC_functional_completeness:complete,CC_gene:UGT74F1,CC_gene:UGT74F2,CC_gene:UGT74E2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016515001~ UDP-glycosyltransferase 74F1~ UGT74F1~ complete;original_location=complement(join(3581893..3582537%2C3580991..3581725));owner=coffea | |
| 21264 chr1 manual_curation exon 33669466 33670200 . + . Parent=GSCOCT00016515001 | |
| 21265 chr1 manual_curation exon 33668550 33669298 . + . Parent=GSCOCT00016515001 | |
| 21266 chr1 manual_curation CDS 33669466 33670200 . + 0 Parent=GSCOCT00016515001 | |
| 21267 chr1 manual_curation CDS 33668654 33669298 . + 0 Parent=GSCOCT00016515001 | |
| 21268 chr1 manual_curation gene 33673306 33675027 . + . ID=GSCOCG00016514001;Name=Cc01_g15820 | |
| 21269 chr1 manual_curation mRNA 33673306 33675027 . + . ID=GSCOCT00016514001;Parent=GSCOCG00016514001;Name=Cc01_g15820 | |
| 21270 chr1 manual_curation polypeptide 33673483 33674951 . + . ID=GSCOCP00016514001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,PROSITE:PS00375,SwissProt:O22820,SwissProt:O22822,SwissProt:P0C7P7,TAIR:AT1G05675.1,TAIR:AT2G43820.1,TAIR:AT2G43840.2,TrEMBL:B9T2H3,TrEMBL:B9T2H4,TrEMBL:C6KI44;Derives_from=GSCOCT00016514001;Name=Cc01_g15820;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.121,PRODUCT:Putative UDP-glycosyltransferase 74F2,CC_functional_completeness:complete,CC_gene:UGT74F2,CC_gene:UGT74F1,CC_gene:UGT74E1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016514001~ Putative UDP-glycosyltransferase 74F2~ UGT74F2~ complete;original_location=complement(join(3577064..3577708%2C3576240..3576980));owner=coffea | |
| 21271 chr1 manual_curation exon 33674211 33675027 . + . Parent=GSCOCT00016514001 | |
| 21272 chr1 manual_curation exon 33673306 33674127 . + . Parent=GSCOCT00016514001 | |
| 21273 chr1 manual_curation CDS 33674211 33674951 . + 0 Parent=GSCOCT00016514001 | |
| 21274 chr1 manual_curation CDS 33673483 33674127 . + 0 Parent=GSCOCT00016514001 | |
| 21275 chr1 manual_curation gene 33678690 33683075 . - . ID=GSCOCG00016512001;Name=Cc01_g15830 | |
| 21276 chr1 manual_curation mRNA 33678690 33683075 . - . ID=GSCOCT00016512001;Parent=GSCOCG00016512001;Name=Cc01_g15830 | |
| 21277 chr1 manual_curation polypeptide 33679634 33681808 . - . ID=GSCOCP00016512001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR020635,PFAM:PF00560,PFAM:PF07714,PFAM:PF08263,PROFILE:PS50011,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:C0LGI5,SwissProt:O04567,SwissProt:Q9ASS4,TAIR:AT1G27190.1,TAIR:AT3G28450.1,TAIR:AT5G48380.1,TrEMBL:A2Q5X8,TrEMBL:A5B9Q7,TrEMBL:D7SZ83;Derives_from=GSCOCT00016512001;Name=Cc01_g15830;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380,CC_functional_completeness:complete,CC_gene:At5g48380,CC_gene:At1g27190,CC_gene:At1g69990;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016512001~ Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380~ At5g48380~ complete;original_location=join(3569383..3570219%2C3570541..3571557);owner=coffea | |
| 21278 chr1 manual_curation exon 33683008 33683075 . - . Parent=GSCOCT00016512001 | |
| 21279 chr1 manual_curation exon 33682705 33682966 . - . Parent=GSCOCT00016512001 | |
| 21280 chr1 manual_curation exon 33680972 33681967 . - . Parent=GSCOCT00016512001 | |
| 21281 chr1 manual_curation exon 33678690 33680650 . - . Parent=GSCOCT00016512001 | |
| 21282 chr1 manual_curation CDS 33680972 33681808 . - 0 Parent=GSCOCT00016512001 | |
| 21283 chr1 manual_curation CDS 33679634 33680650 . - 0 Parent=GSCOCT00016512001 | |
| 21284 chr1 manual_curation gene 33687719 33692099 . + . ID=GSCOCG00016511001;Name=Cc01_g15840 | |
| 21285 chr1 manual_curation mRNA 33687719 33692099 . + . ID=GSCOCT00016511001;Parent=GSCOCG00016511001;Name=Cc01_g15840 | |
| 21286 chr1 manual_curation polypeptide 33688950 33691863 . + . ID=GSCOCP00016511001;Dbxref=InterPro:IPR012474,PFAM:PF07899,SwissProt:P0DH90,TAIR:AT3G22440.1,TAIR:AT4G14900.1,TAIR:AT5G48385.1,TrEMBL:A5B440,TrEMBL:B9GNI0,TrEMBL:F6H7U7;Derives_from=GSCOCT00016511001;Name=Cc01_g15840;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:FRIGIDA-like protein,CC_functional_completeness:complete,CC_gene:FRI;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016511001~ FRIGIDA-like protein~ FRI~ complete;original_location=complement(join(3562175..3562241%2C3561777..3561914%2C3560410..3561471%2C3560118..3560290%2C3559328..3559747));owner=coffea | |
| 21287 chr1 manual_curation exon 33691444 33692099 . + . Parent=GSCOCT00016511001 | |
| 21288 chr1 manual_curation exon 33690901 33691073 . + . Parent=GSCOCT00016511001 | |
| 21289 chr1 manual_curation exon 33689720 33690781 . + . Parent=GSCOCT00016511001 | |
| 21290 chr1 manual_curation exon 33689277 33689414 . + . Parent=GSCOCT00016511001 | |
| 21291 chr1 manual_curation exon 33687719 33689016 . + . Parent=GSCOCT00016511001 | |
| 21292 chr1 manual_curation CDS 33691444 33691863 . + 0 Parent=GSCOCT00016511001 | |
| 21293 chr1 manual_curation CDS 33690901 33691073 . + 1 Parent=GSCOCT00016511001 | |
| 21294 chr1 manual_curation CDS 33689720 33690781 . + 1 Parent=GSCOCT00016511001 | |
| 21295 chr1 manual_curation CDS 33689277 33689414 . + 1 Parent=GSCOCT00016511001 | |
| 21296 chr1 manual_curation CDS 33688950 33689016 . + 0 Parent=GSCOCT00016511001 | |
| 21297 chr1 manual_curation gene 33692874 33696595 . + . ID=GSCOCG00016510001;Name=Cc01_g15850 | |
| 21298 chr1 manual_curation mRNA 33692874 33696595 . + . ID=GSCOCT00016510001;Parent=GSCOCG00016510001;Name=Cc01_g15850 | |
| 21299 chr1 manual_curation polypeptide 33692874 33696595 . + . ID=GSCOCP00016510001;Dbxref=InterPro:IPR013940,InterPro:IPR019734,PFAM:PF08631,SMART:SM00028,TAIR:AT5G48390.1,TrEMBL:A5B439,TrEMBL:A5Y6I6,TrEMBL:B9IB07;Derives_from=GSCOCT00016510001;Name=Cc01_g15850;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Tetratricopeptide repeat (TPR)-like superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016510001~ Tetratricopeptide repeat (TPR)-like superfamily protein~ unknown_gene~ complete;original_location=complement(join(3556996..3558317%2C3556288..3556477%2C3556169..3556201%2C3555452..3556072%2C3554596..3555261));owner=coffea | |
| 21300 chr1 manual_curation exon 33695930 33696595 . + . Parent=GSCOCT00016510001 | |
| 21301 chr1 manual_curation exon 33695119 33695739 . + . Parent=GSCOCT00016510001 | |
| 21302 chr1 manual_curation exon 33694990 33695022 . + . Parent=GSCOCT00016510001 | |
| 21303 chr1 manual_curation exon 33694714 33694903 . + . Parent=GSCOCT00016510001 | |
| 21304 chr1 manual_curation exon 33692874 33694195 . + . Parent=GSCOCT00016510001 | |
| 21305 chr1 manual_curation CDS 33695930 33696595 . + 0 Parent=GSCOCT00016510001 | |
| 21306 chr1 manual_curation CDS 33695119 33695739 . + 0 Parent=GSCOCT00016510001 | |
| 21307 chr1 manual_curation CDS 33694990 33695022 . + 0 Parent=GSCOCT00016510001 | |
| 21308 chr1 manual_curation CDS 33694714 33694903 . + 2 Parent=GSCOCT00016510001 | |
| 21309 chr1 manual_curation CDS 33692874 33694195 . + 0 Parent=GSCOCT00016510001 | |
| 21310 chr1 manual_curation gene 33697026 33701371 . - . ID=GSCOCG00016509001;Name=Cc01_g15860 | |
| 21311 chr1 manual_curation mRNA 33697026 33701371 . - . ID=GSCOCT00016509001;Parent=GSCOCG00016509001;Name=Cc01_g15860 | |
| 21312 chr1 manual_curation polypeptide 33697569 33701050 . - . ID=GSCOCP00016509001;Dbxref=GENE3D:G3DSA:3.40.250.10,InterPro:IPR001763,PROFILE:PS50206,SUPERFAMILY:SSF52821,SwissProt:Q56XR7,SwissProt:Q9M158,TAIR:AT3G25480.1,TAIR:AT4G01050.1,TrEMBL:A5B438,TrEMBL:B9SMR8,TrEMBL:E0CW02;Derives_from=GSCOCT00016509001;Name=Cc01_g15860;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:STR4A,CC_gene:STR4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016509001~ Putative uncharacterized protein~ STR4A~ fragment;original_location=join(3550141..3550574%2C3551500..3551602%2C3552330..3552569%2C3553569..3553622);owner=coffea | |
| 21313 chr1 manual_curation exon 33700617 33701371 . - . Parent=GSCOCT00016509001 | |
| 21314 chr1 manual_curation exon 33699589 33699691 . - . Parent=GSCOCT00016509001 | |
| 21315 chr1 manual_curation exon 33698622 33698861 . - . Parent=GSCOCT00016509001 | |
| 21316 chr1 manual_curation exon 33697026 33697622 . - . Parent=GSCOCT00016509001 | |
| 21317 chr1 manual_curation CDS 33700617 33701050 . - 0 Parent=GSCOCT00016509001 | |
| 21318 chr1 manual_curation CDS 33699589 33699691 . - 2 Parent=GSCOCT00016509001 | |
| 21319 chr1 manual_curation CDS 33698622 33698861 . - 0 Parent=GSCOCT00016509001 | |
| 21320 chr1 manual_curation CDS 33697569 33697622 . - 0 Parent=GSCOCT00016509001 | |
| 21321 chr1 manual_curation gene 33701579 33707443 . + . ID=GSCOCG00016508001;Name=Cc01_g15870 | |
| 21322 chr1 manual_curation mRNA 33701579 33707443 . + . ID=GSCOCT00016508001;Parent=GSCOCG00016508001;Name=Cc01_g15870 | |
| 21323 chr1 manual_curation polypeptide 33701579 33707230 . + . ID=GSCOCP00016508001;Dbxref=InterPro:IPR007135,PFAM:PF03987,SwissProt:Q55EL2,SwissProt:Q8R1P4,SwissProt:Q9H0Y0,TAIR:AT3G07525.2,TrEMBL:B9IB08,TrEMBL:B9SMR7,TrEMBL:E0CW01;Derives_from=GSCOCT00016508001;Name=Cc01_g15870;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative autophagocytosis-associated family protein,CC_functional_completeness:complete,CC_gene:ATG10,CC_gene:Atg10,CC_gene:atg10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016508001~ Putative autophagocytosis-associated family protein~ ATG10~ complete;original_location=complement(join(3549430..3549612%2C3549269..3549322%2C3549046..3549138%2C3547422..3547521%2C3547235..3547332%2C3543961..3544164));owner=coffea | |
| 21324 chr1 manual_curation exon 33707027 33707443 . + . Parent=GSCOCT00016508001 | |
| 21325 chr1 manual_curation exon 33703859 33703956 . + . Parent=GSCOCT00016508001 | |
| 21326 chr1 manual_curation exon 33703670 33703769 . + . Parent=GSCOCT00016508001 | |
| 21327 chr1 manual_curation exon 33702053 33702145 . + . Parent=GSCOCT00016508001 | |
| 21328 chr1 manual_curation exon 33701869 33701922 . + . Parent=GSCOCT00016508001 | |
| 21329 chr1 manual_curation exon 33701579 33701761 . + . Parent=GSCOCT00016508001 | |
| 21330 chr1 manual_curation CDS 33707027 33707230 . + 0 Parent=GSCOCT00016508001 | |
| 21331 chr1 manual_curation CDS 33703859 33703956 . + 1 Parent=GSCOCT00016508001 | |
| 21332 chr1 manual_curation CDS 33703670 33703769 . + 0 Parent=GSCOCT00016508001 | |
| 21333 chr1 manual_curation CDS 33702053 33702145 . + 0 Parent=GSCOCT00016508001 | |
| 21334 chr1 manual_curation CDS 33701869 33701922 . + 0 Parent=GSCOCT00016508001 | |
| 21335 chr1 manual_curation CDS 33701579 33701761 . + 0 Parent=GSCOCT00016508001 | |
| 21336 chr1 manual_curation gene 33707597 33711450 . - . ID=GSCOCG00016507001;Name=Cc01_g15880 | |
| 21337 chr1 manual_curation mRNA 33707597 33711450 . - . ID=GSCOCT00016507001;Parent=GSCOCG00016507001;Name=Cc01_g15880 | |
| 21338 chr1 manual_curation polypeptide 33707901 33711305 . - . ID=GSCOCP00016507001;Dbxref=InterPro:IPR002877,InterPro:IPR002942,InterPro:IPR004538,PFAM:PF01479,PFAM:PF01728,PROFILE:PS50889,SMART:SM00363,SwissProt:P19672,SwissProt:Q06803,SwissProt:Q50760,TAIR:AT3G25470.1,TIGRFAMs:TIGR00478,TrEMBL:B9SMR6,TrEMBL:E0CW03,TrEMBL:I1JME2;Derives_from=GSCOCT00016507001;Name=Cc01_g15880;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0003723,GO:0008168,GO:0019836,GO:0032259,CC_EC_number:missing_EC_number,PRODUCT:Putative rRNA methyltransferase YqxC,CC_functional_completeness:modules,CC_gene:yqxC,CC_gene:tlyA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016507001~ Putative rRNA methyltransferase YqxC~ yqxC~ modules;original_location=join(3539886..3540033%2C3540479..3540560%2C3540981..3541060%2C3541276..3541378%2C3541479..3541635%2C3542097..3542225%2C3542339..3542425%2C3542896..3542940%2C3543162..3543290);owner=coffea | |
| 21339 chr1 manual_curation exon 33711158 33711450 . - . Parent=GSCOCT00016507001 | |
| 21340 chr1 manual_curation exon 33710631 33710712 . - . Parent=GSCOCT00016507001 | |
| 21341 chr1 manual_curation exon 33710131 33710210 . - . Parent=GSCOCT00016507001 | |
| 21342 chr1 manual_curation exon 33709813 33709915 . - . Parent=GSCOCT00016507001 | |
| 21343 chr1 manual_curation exon 33709556 33709712 . - . Parent=GSCOCT00016507001 | |
| 21344 chr1 manual_curation exon 33708966 33709094 . - . Parent=GSCOCT00016507001 | |
| 21345 chr1 manual_curation exon 33708766 33708852 . - . Parent=GSCOCT00016507001 | |
| 21346 chr1 manual_curation exon 33708251 33708295 . - . Parent=GSCOCT00016507001 | |
| 21347 chr1 manual_curation exon 33707597 33708029 . - . Parent=GSCOCT00016507001 | |
| 21348 chr1 manual_curation CDS 33711158 33711305 . - 0 Parent=GSCOCT00016507001 | |
| 21349 chr1 manual_curation CDS 33710631 33710712 . - 1 Parent=GSCOCT00016507001 | |
| 21350 chr1 manual_curation CDS 33710131 33710210 . - 2 Parent=GSCOCT00016507001 | |
| 21351 chr1 manual_curation CDS 33709813 33709915 . - 1 Parent=GSCOCT00016507001 | |
| 21352 chr1 manual_curation CDS 33709556 33709712 . - 2 Parent=GSCOCT00016507001 | |
| 21353 chr1 manual_curation CDS 33708966 33709094 . - 0 Parent=GSCOCT00016507001 | |
| 21354 chr1 manual_curation CDS 33708766 33708852 . - 0 Parent=GSCOCT00016507001 | |
| 21355 chr1 manual_curation CDS 33708251 33708295 . - 0 Parent=GSCOCT00016507001 | |
| 21356 chr1 manual_curation CDS 33707901 33708029 . - 0 Parent=GSCOCT00016507001 | |
| 21357 chr1 manual_curation gene 33712940 33714357 . + . ID=GSCOCG00016506001;Name=Cc01_g15890 | |
| 21358 chr1 manual_curation mRNA 33712940 33714357 . + . ID=GSCOCT00016506001;Parent=GSCOCG00016506001;Name=Cc01_g15890 | |
| 21359 chr1 manual_curation polypeptide 33713137 33714199 . + . ID=GSCOCP00016506001;Dbxref=GENE3D:G3DSA:1.20.1240.10,InterPro:IPR003757,PFAM:PF02605,PRODOM:PD005947,SUPERFAMILY:SSF81568,SwissProt:P23993,SwissProt:Q39654,SwissProt:Q9SUI4,TAIR:AT4G12800.1,TrEMBL:A5AW35,TrEMBL:C6T1C8,TrEMBL:C6T3Q7;Derives_from=GSCOCT00016506001;Name=Cc01_g15890;Ontology_term=CC_evidence_code:ISS,GO:0009538,GO:0015979,CC_EC_number:missing_EC_number,PRODUCT:Photosystem I reaction center subunit XI%2C chloroplastic,CC_functional_completeness:complete,CC_gene:PSAL;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016506001~ Photosystem I reaction center subunit XI%2C chloroplastic~ PSAL~ complete;original_location=complement(join(3537887..3538054%2C3536992..3537483));owner=coffea | |
| 21360 chr1 manual_curation exon 33713708 33714357 . + . Parent=GSCOCT00016506001 | |
| 21361 chr1 manual_curation exon 33712940 33713304 . + . Parent=GSCOCT00016506001 | |
| 21362 chr1 manual_curation CDS 33713708 33714199 . + 0 Parent=GSCOCT00016506001 | |
| 21363 chr1 manual_curation CDS 33713137 33713304 . + 0 Parent=GSCOCT00016506001 | |
| 21364 chr1 manual_curation gene 33715849 33719787 . + . ID=GSCOCG00016505001;Name=Cc01_g15900 | |
| 21365 chr1 manual_curation mRNA 33715849 33719787 . + . ID=GSCOCT00016505001;Parent=GSCOCG00016505001;Name=Cc01_g15900 | |
| 21366 chr1 manual_curation polypeptide 33716053 33719625 . + . ID=GSCOCP00016505001;Dbxref=InterPro:IPR000073,PFAM:PF00561,PRINTS:PR00111,SwissProt:B2HJU9,TAIR:AT1G52510.1,TAIR:AT4G12830.1,TAIR:AT5G19850.1,TrEMBL:B9SMR0,TrEMBL:F6H7U9,TrEMBL:I1JME3;Derives_from=GSCOCT00016505001;Name=Cc01_g15900;Ontology_term=CC_evidence_code:ISS,CC_EC_number:3.8.1.5,PRODUCT:Putative Haloalkane dehalogenase,CC_functional_completeness:modules,CC_gene:dhmA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016505001~ Putative Haloalkane dehalogenase~ dhmA~ modules;original_location=complement(join(3534944..3535138%2C3534780..3534834%2C3534607..3534662%2C3534361..3534461%2C3534110..3534179%2C3533641..3533710%2C3533312..3533368%2C3533121..3533188%2C3532936..3533016%2C3532657..3532734%2C3532383..3532538%2C3531822..3531974%2C3531566..3531637));owner=coffea | |
| 21367 chr1 manual_curation exon 33719554 33719787 . + . Parent=GSCOCT00016505001 | |
| 21368 chr1 manual_curation exon 33719217 33719369 . + . Parent=GSCOCT00016505001 | |
| 21369 chr1 manual_curation exon 33718653 33718808 . + . Parent=GSCOCT00016505001 | |
| 21370 chr1 manual_curation exon 33718457 33718534 . + . Parent=GSCOCT00016505001 | |
| 21371 chr1 manual_curation exon 33718175 33718255 . + . Parent=GSCOCT00016505001 | |
| 21372 chr1 manual_curation exon 33718003 33718070 . + . Parent=GSCOCT00016505001 | |
| 21373 chr1 manual_curation exon 33717823 33717879 . + . Parent=GSCOCT00016505001 | |
| 21374 chr1 manual_curation exon 33717481 33717550 . + . Parent=GSCOCT00016505001 | |
| 21375 chr1 manual_curation exon 33717012 33717081 . + . Parent=GSCOCT00016505001 | |
| 21376 chr1 manual_curation exon 33716730 33716830 . + . Parent=GSCOCT00016505001 | |
| 21377 chr1 manual_curation exon 33716529 33716584 . + . Parent=GSCOCT00016505001 | |
| 21378 chr1 manual_curation exon 33716357 33716411 . + . Parent=GSCOCT00016505001 | |
| 21379 chr1 manual_curation exon 33715849 33716247 . + . Parent=GSCOCT00016505001 | |
| 21380 chr1 manual_curation CDS 33719554 33719625 . + 0 Parent=GSCOCT00016505001 | |
| 21381 chr1 manual_curation CDS 33719217 33719369 . + 0 Parent=GSCOCT00016505001 | |
| 21382 chr1 manual_curation CDS 33718653 33718808 . + 0 Parent=GSCOCT00016505001 | |
| 21383 chr1 manual_curation CDS 33718457 33718534 . + 0 Parent=GSCOCT00016505001 | |
| 21384 chr1 manual_curation CDS 33718175 33718255 . + 0 Parent=GSCOCT00016505001 | |
| 21385 chr1 manual_curation CDS 33718003 33718070 . + 1 Parent=GSCOCT00016505001 | |
| 21386 chr1 manual_curation CDS 33717823 33717879 . + 1 Parent=GSCOCT00016505001 | |
| 21387 chr1 manual_curation CDS 33717481 33717550 . + 0 Parent=GSCOCT00016505001 | |
| 21388 chr1 manual_curation CDS 33717012 33717081 . + 2 Parent=GSCOCT00016505001 | |
| 21389 chr1 manual_curation CDS 33716730 33716830 . + 0 Parent=GSCOCT00016505001 | |
| 21390 chr1 manual_curation CDS 33716529 33716584 . + 1 Parent=GSCOCT00016505001 | |
| 21391 chr1 manual_curation CDS 33716357 33716411 . + 0 Parent=GSCOCT00016505001 | |
| 21392 chr1 manual_curation CDS 33716053 33716247 . + 0 Parent=GSCOCT00016505001 | |
| 21393 chr1 manual_curation gene 33720037 33723700 . - . ID=GSCOCG00016504001;Name=Cc01_g15910 | |
| 21394 chr1 manual_curation mRNA 33720037 33723700 . - . ID=GSCOCT00016504001;Parent=GSCOCG00016504001;Name=Cc01_g15910 | |
| 21395 chr1 manual_curation polypeptide 33720037 33723324 . - . ID=GSCOCP00016504001;Dbxref=InterPro:IPR007877,PFAM:PF05212,TAIR:AT1G11170.1,TAIR:AT4G12840.1,TAIR:AT4G18530.1,TrEMBL:B3LFC6,TrEMBL:D7MVJ1,TrEMBL:F4JRH1;Derives_from=GSCOCT00016504001;Name=Cc01_g15910;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF707),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016504001~ Protein of unknown function (DUF707)~ unknown_gene~ complete;original_location=join(3527867..3527959%2C3528061..3528123%2C3528237..3528338%2C3528479..3528559%2C3528636..3528754%2C3528869..3528970%2C3529257..3529373%2C3529511..3529579%2C3529711..3529777%2C3529960..3530013%2C3530131..3530220%2C3530734..3530793%2C3530877..3530915%2C3531059..3531154);owner=coffea | |
| 21396 chr1 manual_curation exon 33723520 33723700 . - . Parent=GSCOCT00016504001 | |
| 21397 chr1 manual_curation exon 33723232 33723377 . - . Parent=GSCOCT00016504001 | |
| 21398 chr1 manual_curation exon 33723068 33723130 . - . Parent=GSCOCT00016504001 | |
| 21399 chr1 manual_curation exon 33722853 33722954 . - . Parent=GSCOCT00016504001 | |
| 21400 chr1 manual_curation exon 33722632 33722712 . - . Parent=GSCOCT00016504001 | |
| 21401 chr1 manual_curation exon 33722437 33722555 . - . Parent=GSCOCT00016504001 | |
| 21402 chr1 manual_curation exon 33722221 33722322 . - . Parent=GSCOCT00016504001 | |
| 21403 chr1 manual_curation exon 33721818 33721934 . - . Parent=GSCOCT00016504001 | |
| 21404 chr1 manual_curation exon 33721612 33721680 . - . Parent=GSCOCT00016504001 | |
| 21405 chr1 manual_curation exon 33721414 33721480 . - . Parent=GSCOCT00016504001 | |
| 21406 chr1 manual_curation exon 33721178 33721231 . - . Parent=GSCOCT00016504001 | |
| 21407 chr1 manual_curation exon 33720971 33721060 . - . Parent=GSCOCT00016504001 | |
| 21408 chr1 manual_curation exon 33720398 33720457 . - . Parent=GSCOCT00016504001 | |
| 21409 chr1 manual_curation exon 33720276 33720314 . - . Parent=GSCOCT00016504001 | |
| 21410 chr1 manual_curation exon 33720037 33720132 . - . Parent=GSCOCT00016504001 | |
| 21411 chr1 manual_curation CDS 33723232 33723324 . - 0 Parent=GSCOCT00016504001 | |
| 21412 chr1 manual_curation CDS 33723068 33723130 . - 0 Parent=GSCOCT00016504001 | |
| 21413 chr1 manual_curation CDS 33722853 33722954 . - 0 Parent=GSCOCT00016504001 | |
| 21414 chr1 manual_curation CDS 33722632 33722712 . - 0 Parent=GSCOCT00016504001 | |
| 21415 chr1 manual_curation CDS 33722437 33722555 . - 0 Parent=GSCOCT00016504001 | |
| 21416 chr1 manual_curation CDS 33722221 33722322 . - 2 Parent=GSCOCT00016504001 | |
| 21417 chr1 manual_curation CDS 33721818 33721934 . - 2 Parent=GSCOCT00016504001 | |
| 21418 chr1 manual_curation CDS 33721612 33721680 . - 2 Parent=GSCOCT00016504001 | |
| 21419 chr1 manual_curation CDS 33721414 33721480 . - 2 Parent=GSCOCT00016504001 | |
| 21420 chr1 manual_curation CDS 33721178 33721231 . - 0 Parent=GSCOCT00016504001 | |
| 21421 chr1 manual_curation CDS 33720971 33721060 . - 0 Parent=GSCOCT00016504001 | |
| 21422 chr1 manual_curation CDS 33720398 33720457 . - 0 Parent=GSCOCT00016504001 | |
| 21423 chr1 manual_curation CDS 33720276 33720314 . - 0 Parent=GSCOCT00016504001 | |
| 21424 chr1 manual_curation CDS 33720037 33720132 . - 0 Parent=GSCOCT00016504001 | |
| 21425 chr1 manual_curation gene 33723992 33725899 . + . ID=GSCOCG00016503001;Name=Cc01_g15920 | |
| 21426 chr1 manual_curation mRNA 33723992 33725899 . + . ID=GSCOCT00016503001;Parent=GSCOCG00016503001;Name=Cc01_g15920 | |
| 21427 chr1 manual_curation polypeptide 33723992 33725899 . + . ID=GSCOCP00016503001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q9FI80,SwissProt:Q9FIF7,SwissProt:Q9SZT8,TAIR:AT4G37380.1,TAIR:AT5G48910.1,TAIR:AT5G59200.1,TIGRFAMs:TIGR00756,TrEMBL:B9GNH7,TrEMBL:F6GZ71,TrEMBL:F6I261;Derives_from=GSCOCT00016503001;Name=Cc01_g15920;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative pentatricopeptide repeat-containing protein At5g59200%2C chloroplastic,CC_functional_completeness:complete,CC_gene:PCMP-E41,CC_gene:PCMP-H48,CC_gene:PCMP-H38;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016503001~ Putative pentatricopeptide repeat-containing protein At5g59200%2C chloroplastic~ PCMP-E41~ complete;original_location=complement(3525292..3527199);owner=coffea | |
| 21428 chr1 manual_curation exon 33723992 33725899 . + . Parent=GSCOCT00016503001 | |
| 21429 chr1 manual_curation CDS 33723992 33725899 . + 0 Parent=GSCOCT00016503001 | |
| 21430 chr1 manual_curation gene 33726013 33726566 . - . ID=GSCOCG00016502001;Name=Cc01_g15930 | |
| 21431 chr1 manual_curation mRNA 33726013 33726566 . - . ID=GSCOCT00016502001;Parent=GSCOCG00016502001;Name=Cc01_g15930 | |
| 21432 chr1 manual_curation polypeptide 33726013 33726195 . - . ID=GSCOCP00016502001;Derives_from=GSCOCT00016502001;Name=Cc01_g15930;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016502001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=3524996..3525178;owner=coffea | |
| 21433 chr1 manual_curation exon 33726013 33726566 . - . Parent=GSCOCT00016502001 | |
| 21434 chr1 manual_curation CDS 33726013 33726195 . - 0 Parent=GSCOCT00016502001 | |
| 21435 chr1 manual_curation gene 33727586 33729681 . + . ID=GSCOCG00016501001;Name=Cc01_g15940 | |
| 21436 chr1 manual_curation mRNA 33727586 33729681 . + . ID=GSCOCT00016501001;Parent=GSCOCG00016501001;Name=Cc01_g15940 | |
| 21437 chr1 manual_curation polypeptide 33728931 33729681 . + . ID=GSCOCP00016501001;Dbxref=TAIR:AT2G01580.1,TAIR:AT3G07510.1,TAIR:AT5G05950.1,TrEMBL:B9GNH6,TrEMBL:F6I1W8,TrEMBL:I1KYX8;Derives_from=GSCOCT00016501001;Name=Cc01_g15940;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016501001~ unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01580.1)%3B Has 133 Blast hits to 133 proteins in 14 species: Archae - 0%3B Bacteria - 4%3B Metazoa - 0%3B Fungi - 0%3B Plants - 129%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(3522253..3522260%2C3521510..3522095));owner=coffea | |
| 21438 chr1 manual_curation exon 33729096 33729681 . + . Parent=GSCOCT00016501001 | |
| 21439 chr1 manual_curation exon 33727586 33728938 . + . Parent=GSCOCT00016501001 | |
| 21440 chr1 manual_curation CDS 33729096 33729681 . + 2 Parent=GSCOCT00016501001 | |
| 21441 chr1 manual_curation CDS 33728931 33728938 . + 0 Parent=GSCOCT00016501001 | |
| 21442 chr1 manual_curation gene 33735915 33739284 . + . ID=GSCOCG00016500001;Name=Cc01_g15950 | |
| 21443 chr1 manual_curation mRNA 33735915 33739284 . + . ID=GSCOCT00016500001;Parent=GSCOCG00016500001;Name=Cc01_g15950 | |
| 21444 chr1 manual_curation polypeptide 33736050 33737988 . + . ID=GSCOCP00016500001;Dbxref=InterPro:IPR018800,PFAM:PF10253,TAIR:AT2G19270.1,TrEMBL:C6T9K3,TrEMBL:I1LVL6,TrEMBL:I1MSL0;Derives_from=GSCOCT00016500001;Name=Cc01_g15950;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative CONTAINS InterPro DOMAIN/s,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016500001~ Putative CONTAINS InterPro DOMAIN/s: Mitotic checkpoint protein PRCC%2C C-terminal (InterPro:IPR018800)%3B Has 930 Blast hits to 533 proteins in 146 species: Archae - 0%3B Bacteria - 18%3B Metazoa - 327%3B Fungi - 143%3B Plants - 61%3B Viruses - 0%3B Other Eukaryotes - 381 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(3515011..3515141%2C3513912..3514863%2C3513203..3513361));owner=coffea | |
| 21445 chr1 manual_curation exon 33737830 33739284 . + . Parent=GSCOCT00016500001 | |
| 21446 chr1 manual_curation exon 33736328 33737279 . + . Parent=GSCOCT00016500001 | |
| 21447 chr1 manual_curation exon 33735915 33736180 . + . Parent=GSCOCT00016500001 | |
| 21448 chr1 manual_curation CDS 33737830 33737988 . + 0 Parent=GSCOCT00016500001 | |
| 21449 chr1 manual_curation CDS 33736328 33737279 . + 2 Parent=GSCOCT00016500001 | |
| 21450 chr1 manual_curation CDS 33736050 33736180 . + 0 Parent=GSCOCT00016500001 | |
| 21451 chr1 manual_curation gene 33739365 33743204 . - . ID=GSCOCG00016499001;Name=Cc01_g15960 | |
| 21452 chr1 manual_curation mRNA 33739365 33743204 . - . ID=GSCOCT00016499001;Parent=GSCOCG00016499001;Name=Cc01_g15960 | |
| 21453 chr1 manual_curation polypeptide 33740322 33742669 . - . ID=GSCOCP00016499001;Dbxref=InterPro:IPR007905,PANTHER:PTHR14207,PFAM:PF05241,SwissProt:O48962,SwissProt:Q9FTZ2,SwissProt:Q9JJ46,TAIR:AT1G20050.1,TrEMBL:A7XY75,TrEMBL:D6PY90,TrEMBL:F6GU45;Derives_from=GSCOCT00016499001;Name=Cc01_g15960;Ontology_term=CC_evidence_code:ISS,GO:0005783,GO:0016021,GO:0016125,GO:0047750,CC_EC_number:5.3.3.5,PRODUCT:Probable 3-beta-hydroxysteroid-Delta(8)%2CDelta(7)-isomerase,CC_functional_completeness:complete,CC_gene:At1g20050,CC_gene:Os01g0103600,CC_gene:Ebp;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016499001~ Probable 3-beta-hydroxysteroid-Delta(8)%2CDelta(7)-isomerase~ At1g20050~ complete;original_location=join(3508522..3508672%2C3510112..3510258%2C3510347..3510455%2C3510605..3510869);owner=coffea | |
| 21454 chr1 manual_curation exon 33742856 33743204 . - . Parent=GSCOCT00016499001 | |
| 21455 chr1 manual_curation exon 33742519 33742714 . - . Parent=GSCOCT00016499001 | |
| 21456 chr1 manual_curation exon 33740933 33741079 . - . Parent=GSCOCT00016499001 | |
| 21457 chr1 manual_curation exon 33740736 33740844 . - . Parent=GSCOCT00016499001 | |
| 21458 chr1 manual_curation exon 33739365 33740586 . - . Parent=GSCOCT00016499001 | |
| 21459 chr1 manual_curation CDS 33742519 33742669 . - 0 Parent=GSCOCT00016499001 | |
| 21460 chr1 manual_curation CDS 33740933 33741079 . - 1 Parent=GSCOCT00016499001 | |
| 21461 chr1 manual_curation CDS 33740736 33740844 . - 1 Parent=GSCOCT00016499001 | |
| 21462 chr1 manual_curation CDS 33740322 33740586 . - 2 Parent=GSCOCT00016499001 | |
| 21463 chr1 manual_curation gene 33749881 33753103 . + . ID=GSCOCG00016497001;Name=Cc01_g15970 | |
| 21464 chr1 manual_curation mRNA 33749881 33753103 . + . ID=GSCOCT00016497001;Parent=GSCOCG00016497001;Name=Cc01_g15970 | |
| 21465 chr1 manual_curation polypeptide 33750098 33752680 . + . ID=GSCOCP00016497001;Dbxref=InterPro:IPR004330,PFAM:PF03101,SwissProt:Q3E7I5,SwissProt:Q9M8J3,SwissProt:Q9SZL8,TAIR:AT2G43280.1,TAIR:AT3G07500.1,TAIR:AT4G12850.1,TrEMBL:B9GNH5,TrEMBL:B9SMQ1,TrEMBL:Q2HRZ3;Derives_from=GSCOCT00016497001;Name=Cc01_g15970;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein FAR1-RELATED SEQUENCE 7,CC_functional_completeness:fragment,CC_gene:FRS5,CC_gene:FRS7,CC_gene:FRS12;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016497001~ Putative Protein FAR1-RELATED SEQUENCE 7~ FRS5~ fragment;original_location=complement(join(3501066..3501093%2C3499452..3499954%2C3498511..3498711));owner=coffea | |
| 21466 chr1 manual_curation exon 33752480 33753103 . + . Parent=GSCOCT00016497001 | |
| 21467 chr1 manual_curation exon 33751237 33751739 . + . Parent=GSCOCT00016497001 | |
| 21468 chr1 manual_curation exon 33749881 33750125 . + . Parent=GSCOCT00016497001 | |
| 21469 chr1 manual_curation CDS 33752480 33752680 . + 0 Parent=GSCOCT00016497001 | |
| 21470 chr1 manual_curation CDS 33751237 33751739 . + 1 Parent=GSCOCT00016497001 | |
| 21471 chr1 manual_curation CDS 33750098 33750125 . + 0 Parent=GSCOCT00016497001 | |
| 21472 chr1 manual_curation gene 33753551 33756477 . + . ID=GSCOCG00016496001;Name=Cc01_g15980 | |
| 21473 chr1 manual_curation mRNA 33753551 33756477 . + . ID=GSCOCT00016496001;Parent=GSCOCG00016496001;Name=Cc01_g15980 | |
| 21474 chr1 manual_curation polypeptide 33754483 33755474 . + . ID=GSCOCP00016496001;Dbxref=InterPro:IPR004330,PFAM:PF03101,SwissProt:Q3E7I5,SwissProt:Q9M8J3,SwissProt:Q9SZL8,TAIR:AT2G43280.1,TAIR:AT3G07500.1,TAIR:AT4G12850.1,TrEMBL:A5BGK1,TrEMBL:F6I1X0,TrEMBL:I1KFX4;Derives_from=GSCOCT00016496001;Name=Cc01_g15980;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein FAR1-RELATED SEQUENCE 7,CC_functional_completeness:fragment,CC_gene:FRS5,CC_gene:FRS7,CC_gene:FRS12;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016496001~ Putative Protein FAR1-RELATED SEQUENCE 7~ FRS5~ fragment;original_location=complement(join(3496379..3496708%2C3495717..3495935));owner=coffea | |
| 21475 chr1 manual_curation exon 33753551 33753749 . + . Parent=GSCOCT00016496001 | |
| 21476 chr1 manual_curation exon 33755256 33756477 . + . Parent=GSCOCT00016496001 | |
| 21477 chr1 manual_curation exon 33754391 33754812 . + . Parent=GSCOCT00016496001 | |
| 21478 chr1 manual_curation CDS 33755256 33755474 . + 0 Parent=GSCOCT00016496001 | |
| 21479 chr1 manual_curation CDS 33754483 33754812 . + 0 Parent=GSCOCT00016496001 | |
| 21480 chr1 manual_curation gene 33756619 33759188 . + . ID=GSCOCG00016495001;Name=Cc01_g15990 | |
| 21481 chr1 manual_curation mRNA 33756619 33759188 . + . ID=GSCOCT00016495001;Parent=GSCOCG00016495001;Name=Cc01_g15990 | |
| 21482 chr1 manual_curation polypeptide 33757815 33758925 . + . ID=GSCOCP00016495001;Dbxref=InterPro:IPR004330,PFAM:PF03101,SwissProt:Q3E7I5,SwissProt:Q9M8J3,SwissProt:Q9SZL8,TAIR:AT2G43280.1,TAIR:AT3G07500.1,TAIR:AT3G59470.1,TrEMBL:A5BGK0,TrEMBL:B9SMQ0,TrEMBL:F6I1X1;Derives_from=GSCOCT00016495001;Name=Cc01_g15990;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein FAR1-RELATED SEQUENCE 7,CC_functional_completeness:fragment,CC_gene:FRS5,CC_gene:FRS7,CC_gene:FRS12;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016495001~ Putative Protein FAR1-RELATED SEQUENCE 7~ FRS5~ fragment;original_location=complement(join(3492828..3493376%2C3492266..3492475));owner=coffea | |
| 21483 chr1 manual_curation exon 33756619 33756841 . + . Parent=GSCOCT00016495001 | |
| 21484 chr1 manual_curation exon 33758716 33759188 . + . Parent=GSCOCT00016495001 | |
| 21485 chr1 manual_curation exon 33757771 33758363 . + . Parent=GSCOCT00016495001 | |
| 21486 chr1 manual_curation CDS 33758716 33758925 . + 0 Parent=GSCOCT00016495001 | |
| 21487 chr1 manual_curation CDS 33757815 33758363 . + 0 Parent=GSCOCT00016495001 | |
| 21488 chr1 manual_curation gene 33759339 33763062 . - . ID=GSCOCG00016494001;Name=Cc01_g16000 | |
| 21489 chr1 manual_curation mRNA 33759339 33763062 . - . ID=GSCOCT00016494001;Parent=GSCOCG00016494001;Name=Cc01_g16000 | |
| 21490 chr1 manual_curation polypeptide 33760863 33762868 . - . ID=GSCOCP00016494001;Dbxref=InterPro:IPR001890,PFAM:PF01985,PROFILE:PS51295,SUPERFAMILY:SSF75471,SwissProt:Q67XL4,SwissProt:Q6YYA3,SwissProt:Q9FYT6,TAIR:AT2G28480.1,TAIR:AT3G25440.1,TAIR:AT4G13070.1,TrEMBL:B9IB22,TrEMBL:B9SMP9,TrEMBL:I1JB66;Derives_from=GSCOCT00016494001;Name=Cc01_g16000;Ontology_term=CC_evidence_code:ISS,GO:0003723,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterized CRM domain-containing protein At3g25440%2C chloroplastic,CC_functional_completeness:complete,CC_gene:At3g25440,CC_gene:CRS1,CC_gene:Os08g0360100;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016494001~ Uncharacterized CRM domain-containing protein At3g25440%2C chloroplastic~ At3g25440~ complete;original_location=join(3488323..3488435%2C3488546..3488858%2C3489238..3489645%2C3489786..3490328);owner=coffea | |
| 21491 chr1 manual_curation exon 33762756 33763062 . - . Parent=GSCOCT00016494001 | |
| 21492 chr1 manual_curation exon 33762333 33762645 . - . Parent=GSCOCT00016494001 | |
| 21493 chr1 manual_curation exon 33761546 33761953 . - . Parent=GSCOCT00016494001 | |
| 21494 chr1 manual_curation exon 33759339 33761405 . - . Parent=GSCOCT00016494001 | |
| 21495 chr1 manual_curation CDS 33762756 33762868 . - 0 Parent=GSCOCT00016494001 | |
| 21496 chr1 manual_curation CDS 33762333 33762645 . - 2 Parent=GSCOCT00016494001 | |
| 21497 chr1 manual_curation CDS 33761546 33761953 . - 0 Parent=GSCOCT00016494001 | |
| 21498 chr1 manual_curation CDS 33760863 33761405 . - 0 Parent=GSCOCT00016494001 | |
| 21499 chr1 manual_curation gene 33763709 33764493 . - . ID=GSCOCG00016493001;Name=Cc01_g16010 | |
| 21500 chr1 manual_curation mRNA 33763709 33764493 . - . ID=GSCOCT00016493001;Parent=GSCOCG00016493001;Name=Cc01_g16010 | |
| 21501 chr1 manual_curation polypeptide 33764041 33764493 . - . ID=GSCOCP00016493001;Dbxref=GENE3D:G3DSA:1.10.238.10,InterPro:IPR002048,InterPro:IPR011992,InterPro:IPR018247,InterPro:IPR018248,InterPro:IPR018249,PFAM:PF00036,PROFILE:PS50222,PROSITE:PS00018,SMART:SM00054,SwissProt:O22845,SwissProt:Q9LNE7,SwissProt:Q9SRR7,TAIR:AT1G05990.1,TAIR:AT2G43290.1,TAIR:AT3G07490.1,TrEMBL:A9P9T2,TrEMBL:B9HH51,TrEMBL:B9MY35;Derives_from=GSCOCT00016493001;Name=Cc01_g16010;Ontology_term=CC_evidence_code:ISS,GO:0005509,CC_EC_number:missing_EC_number,PRODUCT:Calmodulin-like protein 3,CC_functional_completeness:complete,CC_gene:CML3,CC_gene:CML5,CC_gene:CML7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016493001~ Calmodulin-like protein 3~ CML3~ complete;original_location=3486698..3487150;owner=coffea | |
| 21502 chr1 manual_curation exon 33763709 33764493 . - . Parent=GSCOCT00016493001 | |
| 21503 chr1 manual_curation CDS 33764041 33764493 . - 0 Parent=GSCOCT00016493001 | |
| 21504 chr1 manual_curation gene 33765747 33770324 . - . ID=GSCOCG00016492001;Name=Cc01_g16020 | |
| 21505 chr1 manual_curation mRNA 33765747 33770324 . - . ID=GSCOCT00016492001;Parent=GSCOCG00016492001;Name=Cc01_g16020 | |
| 21506 chr1 manual_curation polypeptide 33766389 33770008 . - . ID=GSCOCP00016492001;Dbxref=InterPro:IPR019557,PFAM:PF10536,SwissProt:Q9LNG5,TAIR:AT1G48120.1,TAIR:AT2G04865.1,TAIR:AT2G25010.1,TrEMBL:A5AWR0,TrEMBL:A5B0J5,TrEMBL:A5C0F5;Derives_from=GSCOCT00016492001;Name=Cc01_g16020;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Aminotransferase-like%2C plant mobile domain family protein,CC_functional_completeness:modules,CC_gene:At1g48120;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016492001~ Putative Aminotransferase-like%2C plant mobile domain family protein~ At1g48120~ modules;original_location=join(3481183..3481286%2C3481994..3483605%2C3483702..3483872%2C3483959..3484402%2C3484506..3484802);owner=coffea | |
| 21507 chr1 manual_curation exon 33769905 33770324 . - . Parent=GSCOCT00016492001 | |
| 21508 chr1 manual_curation exon 33767586 33769197 . - . Parent=GSCOCT00016492001 | |
| 21509 chr1 manual_curation exon 33767319 33767489 . - . Parent=GSCOCT00016492001 | |
| 21510 chr1 manual_curation exon 33766789 33767232 . - . Parent=GSCOCT00016492001 | |
| 21511 chr1 manual_curation exon 33765747 33766685 . - . Parent=GSCOCT00016492001 | |
| 21512 chr1 manual_curation CDS 33769905 33770008 . - 0 Parent=GSCOCT00016492001 | |
| 21513 chr1 manual_curation CDS 33767586 33769197 . - 2 Parent=GSCOCT00016492001 | |
| 21514 chr1 manual_curation CDS 33767319 33767489 . - 0 Parent=GSCOCT00016492001 | |
| 21515 chr1 manual_curation CDS 33766789 33767232 . - 0 Parent=GSCOCT00016492001 | |
| 21516 chr1 manual_curation CDS 33766389 33766685 . - 0 Parent=GSCOCT00016492001 | |
| 21517 chr1 manual_curation gene 33773315 33775237 . - . ID=GSCOCG00016490001;Name=Cc01_g16030 | |
| 21518 chr1 manual_curation mRNA 33773315 33775237 . - . ID=GSCOCT00016490001;Parent=GSCOCG00016490001;Name=Cc01_g16030 | |
| 21519 chr1 manual_curation polypeptide 33774700 33775182 . - . ID=GSCOCP00016490001;Dbxref=GENE3D:G3DSA:3.10.20.30,InterPro:IPR001041,InterPro:IPR012675,SUPERFAMILY:SSF54292,TAIR:AT3G07480.1,TrEMBL:A9PD11,TrEMBL:B9GNH1,TrEMBL:Q9SRR8;Derives_from=GSCOCT00016490001;Name=Cc01_g16030;Ontology_term=CC_evidence_code:ISS,GO:0009055,GO:0051536,CC_EC_number:missing_EC_number,PRODUCT:2Fe-2S ferredoxin-like superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016490001~ 2Fe-2S ferredoxin-like superfamily protein~ unknown_gene~ complete;original_location=3476009..3476491;owner=coffea | |
| 21520 chr1 manual_curation exon 33773315 33773663 . - . Parent=GSCOCT00016490001 | |
| 21521 chr1 manual_curation exon 33774657 33775237 . - . Parent=GSCOCT00016490001 | |
| 21522 chr1 manual_curation CDS 33774700 33775182 . - 0 Parent=GSCOCT00016490001 | |
| 21523 chr1 manual_curation gene 33775961 33779767 . - . ID=GSCOCG00016489001;Name=Cc01_g16040 | |
| 21524 chr1 manual_curation mRNA 33775961 33779767 . - . ID=GSCOCT00016489001;Parent=GSCOCG00016489001;Name=Cc01_g16040 | |
| 21525 chr1 manual_curation polypeptide 33776392 33779767 . - . ID=GSCOCP00016489001;Dbxref=InterPro:IPR006076,PFAM:PF01266,SwissProt:P33642,TAIR:AT5G48440.1,TrEMBL:B9SMP6,TrEMBL:D7MLN9,TrEMBL:G7KWY6;Derives_from=GSCOCT00016489001;Name=Cc01_g16040;Ontology_term=CC_evidence_code:ISS,GO:0016491,CC_EC_number:1.4.99.1,PRODUCT:FAD-dependent oxidoreductase family protein,CC_functional_completeness:complete,CC_gene:PA4548;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016489001~ FAD-dependent oxidoreductase family protein~ PA4548~ complete;original_location=join(3471424..3471799%2C3471937..3472086%2C3472809..3473023%2C3473128..3473198%2C3473283..3473445%2C3473705..3473894%2C3474147..3474305%2C3474418..3474506%2C3474704..3474799);owner=coffea | |
| 21526 chr1 manual_curation exon 33779392 33779767 . - . Parent=GSCOCT00016489001 | |
| 21527 chr1 manual_curation exon 33779105 33779254 . - . Parent=GSCOCT00016489001 | |
| 21528 chr1 manual_curation exon 33778168 33778382 . - . Parent=GSCOCT00016489001 | |
| 21529 chr1 manual_curation exon 33777993 33778063 . - . Parent=GSCOCT00016489001 | |
| 21530 chr1 manual_curation exon 33777746 33777908 . - . Parent=GSCOCT00016489001 | |
| 21531 chr1 manual_curation exon 33777297 33777486 . - . Parent=GSCOCT00016489001 | |
| 21532 chr1 manual_curation exon 33776886 33777044 . - . Parent=GSCOCT00016489001 | |
| 21533 chr1 manual_curation exon 33776685 33776773 . - . Parent=GSCOCT00016489001 | |
| 21534 chr1 manual_curation exon 33775961 33776487 . - . Parent=GSCOCT00016489001 | |
| 21535 chr1 manual_curation CDS 33779392 33779767 . - 0 Parent=GSCOCT00016489001 | |
| 21536 chr1 manual_curation CDS 33779105 33779254 . - 1 Parent=GSCOCT00016489001 | |
| 21537 chr1 manual_curation CDS 33778168 33778382 . - 1 Parent=GSCOCT00016489001 | |
| 21538 chr1 manual_curation CDS 33777993 33778063 . - 0 Parent=GSCOCT00016489001 | |
| 21539 chr1 manual_curation CDS 33777746 33777908 . - 2 Parent=GSCOCT00016489001 | |
| 21540 chr1 manual_curation CDS 33777297 33777486 . - 0 Parent=GSCOCT00016489001 | |
| 21541 chr1 manual_curation CDS 33776886 33777044 . - 1 Parent=GSCOCT00016489001 | |
| 21542 chr1 manual_curation CDS 33776685 33776773 . - 1 Parent=GSCOCT00016489001 | |
| 21543 chr1 manual_curation CDS 33776392 33776487 . - 0 Parent=GSCOCT00016489001 | |
| 21544 chr1 manual_curation gene 33782071 33785228 . + . ID=GSCOCG00016487001;Name=Cc01_g16050 | |
| 21545 chr1 manual_curation mRNA 33782071 33785228 . + . ID=GSCOCT00016487001;Parent=GSCOCG00016487001;Name=Cc01_g16050 | |
| 21546 chr1 manual_curation polypeptide 33782216 33784936 . + . ID=GSCOCP00016487001;Dbxref=GENE3D:G3DSA:4.10.280.10,InterPro:IPR001092,InterPro:IPR011598,InterPro:IPR015660,PANTHER:PTHR13935,PFAM:PF00010,PROFILE:PS50888,SMART:SM00353,SUPERFAMILY:SSF47459,SwissProt:Q0WNR2,SwissProt:Q2HIV9,SwissProt:Q9ZVX2,TAIR:AT1G10610.1,TAIR:AT2G16910.1,TAIR:AT5G57150.4,TrEMBL:B9SHA3,TrEMBL:I1KXF6,TrEMBL:Q84WX1;Derives_from=GSCOCT00016487001;Name=Cc01_g16050;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0005634,GO:0030528,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative Transcription factor bHLH90,CC_functional_completeness:complete,CC_gene:BHLH90,CC_gene:AMS,CC_gene:BHLH35;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016487001~ Putative Transcription factor bHLH90~ BHLH90~ complete;original_location=complement(join(3468749..3468975%2C3468422..3468604%2C3468252..3468326%2C3467811..3467874%2C3467173..3467724%2C3466849..3467085%2C3466531..3466707%2C3466255..3466347));owner=coffea | |
| 21547 chr1 manual_curation exon 33784844 33785228 . + . Parent=GSCOCT00016487001 | |
| 21548 chr1 manual_curation exon 33784484 33784660 . + . Parent=GSCOCT00016487001 | |
| 21549 chr1 manual_curation exon 33784106 33784342 . + . Parent=GSCOCT00016487001 | |
| 21550 chr1 manual_curation exon 33783467 33784018 . + . Parent=GSCOCT00016487001 | |
| 21551 chr1 manual_curation exon 33783317 33783380 . + . Parent=GSCOCT00016487001 | |
| 21552 chr1 manual_curation exon 33782865 33782939 . + . Parent=GSCOCT00016487001 | |
| 21553 chr1 manual_curation exon 33782587 33782769 . + . Parent=GSCOCT00016487001 | |
| 21554 chr1 manual_curation exon 33782071 33782442 . + . Parent=GSCOCT00016487001 | |
| 21555 chr1 manual_curation CDS 33784844 33784936 . + 0 Parent=GSCOCT00016487001 | |
| 21556 chr1 manual_curation CDS 33784484 33784660 . + 0 Parent=GSCOCT00016487001 | |
| 21557 chr1 manual_curation CDS 33784106 33784342 . + 0 Parent=GSCOCT00016487001 | |
| 21558 chr1 manual_curation CDS 33783467 33784018 . + 0 Parent=GSCOCT00016487001 | |
| 21559 chr1 manual_curation CDS 33783317 33783380 . + 2 Parent=GSCOCT00016487001 | |
| 21560 chr1 manual_curation CDS 33782865 33782939 . + 2 Parent=GSCOCT00016487001 | |
| 21561 chr1 manual_curation CDS 33782587 33782769 . + 2 Parent=GSCOCT00016487001 | |
| 21562 chr1 manual_curation CDS 33782216 33782442 . + 0 Parent=GSCOCT00016487001 | |
| 21563 chr1 manual_curation gene 33785301 33791259 . - . ID=GSCOCG00016486001;Name=Cc01_g16060 | |
| 21564 chr1 manual_curation mRNA 33785301 33791259 . - . ID=GSCOCT00016486001;Parent=GSCOCG00016486001;Name=Cc01_g16060 | |
| 21565 chr1 manual_curation polypeptide 33785726 33791213 . - . ID=GSCOCP00016486001;Dbxref=InterPro:IPR001563,InterPro:IPR018202,PANTHER:PTHR11802,PFAM:PF00450,PRINTS:PR00724,PROSITE:PS00131,SwissProt:P07519,SwissProt:P37890,SwissProt:Q8L7B2,TAIR:AT1G73280.1,TAIR:AT3G25420.1,TAIR:AT4G12910.1,TrEMBL:B9IB28,TrEMBL:F6HWI4,TrEMBL:G7LEB3;Derives_from=GSCOCT00016486001;Name=Cc01_g16060;Ontology_term=CC_evidence_code:ISS,GO:0004185,GO:0006508,CC_EC_number:3.4.16.5,PRODUCT:Serine carboxypeptidase 1,CC_functional_completeness:complete,CC_gene:CBP1,CC_gene:SCPL20;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016486001~ Serine carboxypeptidase 1~ CBP1~ complete;original_location=join(3459978..3460129%2C3460252..3460397%2C3460970..3461046%2C3461292..3461414%2C3461550..3461652%2C3462279..3462316%2C3462382..3462483%2C3462829..3462909%2C3462992..3463234%2C3464144..3464209%2C3464277..3464398%2C3464918..3465031%2C3465206..3465251%2C3465382..3465465);owner=coffea | |
| 21566 chr1 manual_curation exon 33791062 33791259 . - . Parent=GSCOCT00016486001 | |
| 21567 chr1 manual_curation exon 33790794 33790939 . - . Parent=GSCOCT00016486001 | |
| 21568 chr1 manual_curation exon 33790145 33790221 . - . Parent=GSCOCT00016486001 | |
| 21569 chr1 manual_curation exon 33789777 33789899 . - . Parent=GSCOCT00016486001 | |
| 21570 chr1 manual_curation exon 33789539 33789641 . - . Parent=GSCOCT00016486001 | |
| 21571 chr1 manual_curation exon 33788875 33788912 . - . Parent=GSCOCT00016486001 | |
| 21572 chr1 manual_curation exon 33788708 33788809 . - . Parent=GSCOCT00016486001 | |
| 21573 chr1 manual_curation exon 33788282 33788362 . - . Parent=GSCOCT00016486001 | |
| 21574 chr1 manual_curation exon 33787957 33788199 . - . Parent=GSCOCT00016486001 | |
| 21575 chr1 manual_curation exon 33786982 33787047 . - . Parent=GSCOCT00016486001 | |
| 21576 chr1 manual_curation exon 33786793 33786914 . - . Parent=GSCOCT00016486001 | |
| 21577 chr1 manual_curation exon 33786160 33786273 . - . Parent=GSCOCT00016486001 | |
| 21578 chr1 manual_curation exon 33785940 33785985 . - . Parent=GSCOCT00016486001 | |
| 21579 chr1 manual_curation exon 33785301 33785809 . - . Parent=GSCOCT00016486001 | |
| 21580 chr1 manual_curation CDS 33791062 33791213 . - 0 Parent=GSCOCT00016486001 | |
| 21581 chr1 manual_curation CDS 33790794 33790939 . - 2 Parent=GSCOCT00016486001 | |
| 21582 chr1 manual_curation CDS 33790145 33790221 . - 1 Parent=GSCOCT00016486001 | |
| 21583 chr1 manual_curation CDS 33789777 33789899 . - 0 Parent=GSCOCT00016486001 | |
| 21584 chr1 manual_curation CDS 33789539 33789641 . - 0 Parent=GSCOCT00016486001 | |
| 21585 chr1 manual_curation CDS 33788875 33788912 . - 1 Parent=GSCOCT00016486001 | |
| 21586 chr1 manual_curation CDS 33788708 33788809 . - 0 Parent=GSCOCT00016486001 | |
| 21587 chr1 manual_curation CDS 33788282 33788362 . - 0 Parent=GSCOCT00016486001 | |
| 21588 chr1 manual_curation CDS 33787957 33788199 . - 0 Parent=GSCOCT00016486001 | |
| 21589 chr1 manual_curation CDS 33786982 33787047 . - 0 Parent=GSCOCT00016486001 | |
| 21590 chr1 manual_curation CDS 33786793 33786914 . - 0 Parent=GSCOCT00016486001 | |
| 21591 chr1 manual_curation CDS 33786160 33786273 . - 2 Parent=GSCOCT00016486001 | |
| 21592 chr1 manual_curation CDS 33785940 33785985 . - 2 Parent=GSCOCT00016486001 | |
| 21593 chr1 manual_curation CDS 33785726 33785809 . - 0 Parent=GSCOCT00016486001 | |
| 21594 chr1 manual_curation gene 33792121 33798186 . - . ID=GSCOCG00016485001;Name=Cc01_g16070 | |
| 21595 chr1 manual_curation mRNA 33792121 33798186 . - . ID=GSCOCT00016485001;Parent=GSCOCG00016485001;Name=Cc01_g16070 | |
| 21596 chr1 manual_curation polypeptide 33792541 33797765 . - . ID=GSCOCP00016485001;Dbxref=GENE3D:G3DSA:2.60.40.420,InterPro:IPR001117,InterPro:IPR008972,InterPro:IPR011706,InterPro:IPR011707,PFAM:PF00394,PFAM:PF07731,PFAM:PF07732,SUPERFAMILY:SSF49503,SwissProt:Q8VXX5,SwissProt:Q9FHN6,SwissProt:Q9SU40,TAIR:AT4G12420.1,TAIR:AT4G25240.1,TAIR:AT5G48450.1,TrEMBL:B9IB29,TrEMBL:B9SMP3,TrEMBL:D7TYL0;Derives_from=GSCOCT00016485001;Name=Cc01_g16070;Ontology_term=CC_evidence_code:ISS,GO:0005507,GO:0016491,GO:0055114,CC_EC_number:1.10.3.3,PRODUCT:Monocopper oxidase-like protein SKU5,CC_functional_completeness:complete,CC_gene:SKU5,CC_gene:SKS1,CC_gene:SKS2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016485001~ Monocopper oxidase-like protein SKU5~ SKU5~ complete;original_location=join(3453426..3453593%2C3454973..3455082%2C3455157..3455427%2C3455525..3455663%2C3456211..3456574%2C3456894..3457259%2C3457347..3457425%2C3458029..3458225%2C3458542..3458650);owner=coffea | |
| 21597 chr1 manual_curation exon 33797598 33798186 . - . Parent=GSCOCT00016485001 | |
| 21598 chr1 manual_curation exon 33796109 33796218 . - . Parent=GSCOCT00016485001 | |
| 21599 chr1 manual_curation exon 33795764 33796034 . - . Parent=GSCOCT00016485001 | |
| 21600 chr1 manual_curation exon 33795528 33795666 . - . Parent=GSCOCT00016485001 | |
| 21601 chr1 manual_curation exon 33794617 33794980 . - . Parent=GSCOCT00016485001 | |
| 21602 chr1 manual_curation exon 33793932 33794297 . - . Parent=GSCOCT00016485001 | |
| 21603 chr1 manual_curation exon 33793766 33793844 . - . Parent=GSCOCT00016485001 | |
| 21604 chr1 manual_curation exon 33792966 33793162 . - . Parent=GSCOCT00016485001 | |
| 21605 chr1 manual_curation exon 33792121 33792649 . - . Parent=GSCOCT00016485001 | |
| 21606 chr1 manual_curation CDS 33797598 33797765 . - 0 Parent=GSCOCT00016485001 | |
| 21607 chr1 manual_curation CDS 33796109 33796218 . - 0 Parent=GSCOCT00016485001 | |
| 21608 chr1 manual_curation CDS 33795764 33796034 . - 2 Parent=GSCOCT00016485001 | |
| 21609 chr1 manual_curation CDS 33795528 33795666 . - 0 Parent=GSCOCT00016485001 | |
| 21610 chr1 manual_curation CDS 33794617 33794980 . - 1 Parent=GSCOCT00016485001 | |
| 21611 chr1 manual_curation CDS 33793932 33794297 . - 2 Parent=GSCOCT00016485001 | |
| 21612 chr1 manual_curation CDS 33793766 33793844 . - 2 Parent=GSCOCT00016485001 | |
| 21613 chr1 manual_curation CDS 33792966 33793162 . - 0 Parent=GSCOCT00016485001 | |
| 21614 chr1 manual_curation CDS 33792541 33792649 . - 2 Parent=GSCOCT00016485001 | |
| 21615 chr1 manual_curation gene 33846563 33848407 . + . ID=GSCOCG00016483001;Name=Cc01_g16080 | |
| 21616 chr1 manual_curation mRNA 33846563 33848407 . + . ID=GSCOCT00016483001;Parent=GSCOCG00016483001;Name=Cc01_g16080 | |
| 21617 chr1 manual_curation polypeptide 33846766 33847967 . + . ID=GSCOCP00016483001;Dbxref=GENE3D:G3DSA:2.30.240.10,InterPro:IPR007493,PFAM:PF04398,TAIR:AT3G07460.2,TAIR:AT3G07470.1,TAIR:AT5G16380.1,TrEMBL:B9GNH0,TrEMBL:B9SMP1,TrEMBL:Q53HY4;Derives_from=GSCOCT00016483001;Name=Cc01_g16080;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function%2C DUF538,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016483001~ Protein of unknown function%2C DUF538~ unknown_gene~ complete;original_location=complement(join(3403934..3404425%2C3403224..3403286));owner=coffea | |
| 21618 chr1 manual_curation exon 33847905 33848407 . + . Parent=GSCOCT00016483001 | |
| 21619 chr1 manual_curation exon 33846563 33847257 . + . Parent=GSCOCT00016483001 | |
| 21620 chr1 manual_curation CDS 33847905 33847967 . + 0 Parent=GSCOCT00016483001 | |
| 21621 chr1 manual_curation CDS 33846766 33847257 . + 0 Parent=GSCOCT00016483001 | |
| 21622 chr1 manual_curation gene 33848569 33848917 . + . ID=GSCOCG00016482001;Name=Cc01_g16090 | |
| 21623 chr1 manual_curation mRNA 33848569 33848917 . + . ID=GSCOCT00016482001;Parent=GSCOCG00016482001;Name=Cc01_g16090 | |
| 21624 chr1 manual_curation polypeptide 33848569 33848917 . + . ID=GSCOCP00016482001;Derives_from=GSCOCT00016482001;Name=Cc01_g16090;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016482001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(3402420..3402622%2C3402274..3402304));owner=coffea | |
| 21625 chr1 manual_curation exon 33848887 33848917 . + . Parent=GSCOCT00016482001 | |
| 21626 chr1 manual_curation exon 33848569 33848771 . + . Parent=GSCOCT00016482001 | |
| 21627 chr1 manual_curation CDS 33848887 33848917 . + 2 Parent=GSCOCT00016482001 | |
| 21628 chr1 manual_curation CDS 33848569 33848771 . + 0 Parent=GSCOCT00016482001 | |
| 21629 chr1 manual_curation gene 33851859 33855456 . + . ID=GSCOCG00016481001;Name=Cc01_g16100 | |
| 21630 chr1 manual_curation mRNA 33851859 33855456 . + . ID=GSCOCT00016481001;Parent=GSCOCG00016481001;Name=Cc01_g16100 | |
| 21631 chr1 manual_curation polypeptide 33851997 33854651 . + . ID=GSCOCP00016481001;Dbxref=InterPro:IPR002657,PANTHER:PTHR10361,PFAM:PF01758,SwissProt:O34524,SwissProt:Q14973,TAIR:AT3G25410.1,TAIR:AT4G12030.2,TAIR:AT4G22840.1,TrEMBL:B9IB31,TrEMBL:D7TYL1,TrEMBL:Q8RXE8;Derives_from=GSCOCT00016481001;Name=Cc01_g16100;Ontology_term=CC_evidence_code:ISS,GO:0006814,GO:0008508,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized sodium-dependent transporter yocS,CC_functional_completeness:modules,CC_gene:yocS,CC_gene:SLC10A1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016481001~ Putative Uncharacterized sodium-dependent transporter yocS~ yocS~ modules;original_location=complement(join(3398776..3399194%2C3398208..3398303%2C3397769..3398087%2C3397320..3397567%2C3396540..3396777));owner=coffea | |
| 21632 chr1 manual_curation exon 33854414 33855456 . + . Parent=GSCOCT00016481001 | |
| 21633 chr1 manual_curation exon 33853624 33853871 . + . Parent=GSCOCT00016481001 | |
| 21634 chr1 manual_curation exon 33853104 33853422 . + . Parent=GSCOCT00016481001 | |
| 21635 chr1 manual_curation exon 33852888 33852983 . + . Parent=GSCOCT00016481001 | |
| 21636 chr1 manual_curation exon 33851859 33852415 . + . Parent=GSCOCT00016481001 | |
| 21637 chr1 manual_curation CDS 33854414 33854651 . + 2 Parent=GSCOCT00016481001 | |
| 21638 chr1 manual_curation CDS 33853624 33853871 . + 0 Parent=GSCOCT00016481001 | |
| 21639 chr1 manual_curation CDS 33853104 33853422 . + 2 Parent=GSCOCT00016481001 | |
| 21640 chr1 manual_curation CDS 33852888 33852983 . + 2 Parent=GSCOCT00016481001 | |
| 21641 chr1 manual_curation CDS 33851997 33852415 . + 0 Parent=GSCOCT00016481001 | |
| 21642 chr1 manual_curation gene 33859769 33861079 . - . ID=GSCOCG00016480001;Name=Cc01_g16110 | |
| 21643 chr1 manual_curation mRNA 33859769 33861079 . - . ID=GSCOCT00016480001;Parent=GSCOCG00016480001;Name=Cc01_g16110 | |
| 21644 chr1 manual_curation polypeptide 33860098 33860598 . - . ID=GSCOCP00016480001;Dbxref=TAIR:AT2G43060.1,TrEMBL:A5AK99,TrEMBL:B9GU92,TrEMBL:B9SMN9;Derives_from=GSCOCT00016480001;Name=Cc01_g16110;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative ILI1 binding bHLH 1,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016480001~ Putative ILI1 binding bHLH 1~ unknown_gene~ complete;original_location=join(3390593..3390683%2C3390720..3390869%2C3390936..3391093);owner=coffea | |
| 21645 chr1 manual_curation exon 33860508 33861079 . - . Parent=GSCOCT00016480001 | |
| 21646 chr1 manual_curation exon 33860322 33860471 . - . Parent=GSCOCT00016480001 | |
| 21647 chr1 manual_curation exon 33859769 33860255 . - . Parent=GSCOCT00016480001 | |
| 21648 chr1 manual_curation CDS 33860508 33860598 . - 0 Parent=GSCOCT00016480001 | |
| 21649 chr1 manual_curation CDS 33860322 33860471 . - 1 Parent=GSCOCT00016480001 | |
| 21650 chr1 manual_curation CDS 33860098 33860255 . - 1 Parent=GSCOCT00016480001 | |
| 21651 chr1 manual_curation gene 33868131 33876235 . - . ID=GSCOCG00016479001;Name=Cc01_g16120 | |
| 21652 chr1 manual_curation mRNA 33868131 33876235 . - . ID=GSCOCT00016479001;Parent=GSCOCG00016479001;Name=Cc01_g16120 | |
| 21653 chr1 manual_curation polypeptide 33868623 33875976 . - . ID=GSCOCP00016479001;Dbxref=GENE3D:G3DSA:1.10.238.10,GENE3D:G3DSA:1.10.418.10,InterPro:IPR001715,InterPro:IPR011992,InterPro:IPR016146,PFAM:PF00307,PROFILE:PS50021,SMART:SM00033,SUPERFAMILY:SSF47576,SwissProt:Q7G188,SwissProt:Q9FJ70,SwissProt:Q9FKI0,TAIR:AT4G26700.1,TAIR:AT5G35700.1,TAIR:AT5G48460.1,TrEMBL:B9GR83,TrEMBL:B9SMN8,TrEMBL:I1KYY8;Derives_from=GSCOCT00016479001;Name=Cc01_g16120;Ontology_term=CC_evidence_code:ISS,GO:0005509,CC_EC_number:missing_EC_number,PRODUCT:Fimbrin-like protein 2,CC_functional_completeness:complete,CC_gene:FIM2,CC_gene:FIM1,CC_gene:FIM3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016479001~ Fimbrin-like protein 2~ FIM2~ complete;original_location=join(3375215..3375301%2C3375413..3375586%2C3376226..3376464%2C3376560..3376731%2C3377271..3377309%2C3377527..3377595%2C3377681..3377797%2C3378562..3378773%2C3379606..3379761%2C3379950..3380149%2C3380303..3380460%2C3381127..3381223%2C3381869..3381960%2C3382386..3382568);owner=coffea | |
| 21654 chr1 manual_curation exon 33875890 33876235 . - . Parent=GSCOCT00016479001 | |
| 21655 chr1 manual_curation exon 33875605 33875778 . - . Parent=GSCOCT00016479001 | |
| 21656 chr1 manual_curation exon 33874727 33874965 . - . Parent=GSCOCT00016479001 | |
| 21657 chr1 manual_curation exon 33874460 33874631 . - . Parent=GSCOCT00016479001 | |
| 21658 chr1 manual_curation exon 33873882 33873920 . - . Parent=GSCOCT00016479001 | |
| 21659 chr1 manual_curation exon 33873596 33873664 . - . Parent=GSCOCT00016479001 | |
| 21660 chr1 manual_curation exon 33873394 33873510 . - . Parent=GSCOCT00016479001 | |
| 21661 chr1 manual_curation exon 33872418 33872629 . - . Parent=GSCOCT00016479001 | |
| 21662 chr1 manual_curation exon 33871430 33871585 . - . Parent=GSCOCT00016479001 | |
| 21663 chr1 manual_curation exon 33871042 33871241 . - . Parent=GSCOCT00016479001 | |
| 21664 chr1 manual_curation exon 33870731 33870888 . - . Parent=GSCOCT00016479001 | |
| 21665 chr1 manual_curation exon 33869968 33870064 . - . Parent=GSCOCT00016479001 | |
| 21666 chr1 manual_curation exon 33869231 33869322 . - . Parent=GSCOCT00016479001 | |
| 21667 chr1 manual_curation exon 33868131 33868805 . - . Parent=GSCOCT00016479001 | |
| 21668 chr1 manual_curation CDS 33875890 33875976 . - 0 Parent=GSCOCT00016479001 | |
| 21669 chr1 manual_curation CDS 33875605 33875778 . - 0 Parent=GSCOCT00016479001 | |
| 21670 chr1 manual_curation CDS 33874727 33874965 . - 0 Parent=GSCOCT00016479001 | |
| 21671 chr1 manual_curation CDS 33874460 33874631 . - 2 Parent=GSCOCT00016479001 | |
| 21672 chr1 manual_curation CDS 33873882 33873920 . - 0 Parent=GSCOCT00016479001 | |
| 21673 chr1 manual_curation CDS 33873596 33873664 . - 0 Parent=GSCOCT00016479001 | |
| 21674 chr1 manual_curation CDS 33873394 33873510 . - 0 Parent=GSCOCT00016479001 | |
| 21675 chr1 manual_curation CDS 33872418 33872629 . - 0 Parent=GSCOCT00016479001 | |
| 21676 chr1 manual_curation CDS 33871430 33871585 . - 2 Parent=GSCOCT00016479001 | |
| 21677 chr1 manual_curation CDS 33871042 33871241 . - 2 Parent=GSCOCT00016479001 | |
| 21678 chr1 manual_curation CDS 33870731 33870888 . - 1 Parent=GSCOCT00016479001 | |
| 21679 chr1 manual_curation CDS 33869968 33870064 . - 0 Parent=GSCOCT00016479001 | |
| 21680 chr1 manual_curation CDS 33869231 33869322 . - 1 Parent=GSCOCT00016479001 | |
| 21681 chr1 manual_curation CDS 33868623 33868805 . - 0 Parent=GSCOCT00016479001 | |
| 21682 chr1 manual_curation gene 33882718 33887272 . - . ID=GSCOCG00016477001;Name=Cc01_g16130 | |
| 21683 chr1 manual_curation mRNA 33882718 33887272 . - . ID=GSCOCT00016477001;Parent=GSCOCG00016477001;Name=Cc01_g16130 | |
| 21684 chr1 manual_curation polypeptide 33883185 33887205 . - . ID=GSCOCP00016477001;Dbxref=TAIR:AT5G48470.1,TrEMBL:D7U6E4,TrEMBL:Q1H5E9,TrEMBL:Q8LCQ2;Derives_from=GSCOCT00016477001;Name=Cc01_g16130;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016477001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(3363986..3364291%2C3365379..3365534%2C3365893..3365961%2C3366055..3366225%2C3366685..3366828%2C3366985..3367143%2C3367242..3367307%2C3367587..3367646%2C3367962..3368006);owner=coffea | |
| 21685 chr1 manual_curation exon 33886900 33887272 . - . Parent=GSCOCT00016477001 | |
| 21686 chr1 manual_curation exon 33885657 33885812 . - . Parent=GSCOCT00016477001 | |
| 21687 chr1 manual_curation exon 33885230 33885298 . - . Parent=GSCOCT00016477001 | |
| 21688 chr1 manual_curation exon 33884966 33885136 . - . Parent=GSCOCT00016477001 | |
| 21689 chr1 manual_curation exon 33884363 33884506 . - . Parent=GSCOCT00016477001 | |
| 21690 chr1 manual_curation exon 33884048 33884206 . - . Parent=GSCOCT00016477001 | |
| 21691 chr1 manual_curation exon 33883884 33883949 . - . Parent=GSCOCT00016477001 | |
| 21692 chr1 manual_curation exon 33883545 33883604 . - . Parent=GSCOCT00016477001 | |
| 21693 chr1 manual_curation exon 33882718 33883229 . - . Parent=GSCOCT00016477001 | |
| 21694 chr1 manual_curation CDS 33886900 33887205 . - 0 Parent=GSCOCT00016477001 | |
| 21695 chr1 manual_curation CDS 33885657 33885812 . - 0 Parent=GSCOCT00016477001 | |
| 21696 chr1 manual_curation CDS 33885230 33885298 . - 0 Parent=GSCOCT00016477001 | |
| 21697 chr1 manual_curation CDS 33884966 33885136 . - 0 Parent=GSCOCT00016477001 | |
| 21698 chr1 manual_curation CDS 33884363 33884506 . - 0 Parent=GSCOCT00016477001 | |
| 21699 chr1 manual_curation CDS 33884048 33884206 . - 0 Parent=GSCOCT00016477001 | |
| 21700 chr1 manual_curation CDS 33883884 33883949 . - 0 Parent=GSCOCT00016477001 | |
| 21701 chr1 manual_curation CDS 33883545 33883604 . - 0 Parent=GSCOCT00016477001 | |
| 21702 chr1 manual_curation CDS 33883185 33883229 . - 0 Parent=GSCOCT00016477001 | |
| 21703 chr1 manual_curation gene 33889796 33891393 . + . ID=GSCOCG00016476001;Name=Cc01_g16140 | |
| 21704 chr1 manual_curation mRNA 33889796 33891393 . + . ID=GSCOCT00016476001;Parent=GSCOCG00016476001;Name=Cc01_g16140 | |
| 21705 chr1 manual_curation polypeptide 33889943 33891087 . + . ID=GSCOCP00016476001;Dbxref=SwissProt:Q9LV66,TAIR:AT5G48480.1,TrEMBL:C6SZI9,TrEMBL:I1N1R1,TrEMBL:Q84XA0;Derives_from=GSCOCT00016476001;Name=Cc01_g16140;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized protein At5g48480,CC_functional_completeness:complete,CC_gene:At5g48480;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016476001~ Putative Uncharacterized protein At5g48480~ At5g48480~ complete;original_location=complement(join(3360968..3361248%2C3360104..3360320));owner=coffea | |
| 21706 chr1 manual_curation exon 33890871 33891393 . + . Parent=GSCOCT00016476001 | |
| 21707 chr1 manual_curation exon 33889796 33890223 . + . Parent=GSCOCT00016476001 | |
| 21708 chr1 manual_curation CDS 33890871 33891087 . + 2 Parent=GSCOCT00016476001 | |
| 21709 chr1 manual_curation CDS 33889943 33890223 . + 0 Parent=GSCOCT00016476001 | |
| 21710 chr1 manual_curation gene 33893607 33894704 . - . ID=GSCOCG00016475001;Name=Cc01_g16150 | |
| 21711 chr1 manual_curation mRNA 33893607 33894704 . - . ID=GSCOCT00016475001;Parent=GSCOCG00016475001;Name=Cc01_g16150 | |
| 21712 chr1 manual_curation polypeptide 33894267 33894602 . - . ID=GSCOCP00016475001;Dbxref=InterPro:IPR003612,InterPro:IPR016140,PFAM:PF00234,SMART:SM00499,SUPERFAMILY:SSF47699,SwissProt:Q8W453,TAIR:AT5G48485.1,TAIR:AT5G48490.1,TAIR:AT5G55410.2,TrEMBL:B9SMN5,TrEMBL:C6SVE1,TrEMBL:F5BR62;Derives_from=GSCOCT00016475001;Name=Cc01_g16150;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein,CC_functional_completeness:complete,CC_gene:DIR1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016475001~ Putative Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein~ DIR1~ complete;original_location=3356589..3356924;owner=coffea | |
| 21713 chr1 manual_curation exon 33893607 33894114 . - . Parent=GSCOCT00016475001 | |
| 21714 chr1 manual_curation exon 33894264 33894704 . - . Parent=GSCOCT00016475001 | |
| 21715 chr1 manual_curation CDS 33894267 33894602 . - 0 Parent=GSCOCT00016475001 | |
| 21716 chr1 manual_curation gene 33897769 33900539 . + . ID=GSCOCG00016474001;Name=Cc01_g16160 | |
| 21717 chr1 manual_curation mRNA 33897769 33900539 . + . ID=GSCOCT00016474001;Parent=GSCOCG00016474001;Name=Cc01_g16160 | |
| 21718 chr1 manual_curation polypeptide 33897921 33899951 . + . ID=GSCOCP00016474001;Dbxref=TAIR:AT5G48500.1,TrEMBL:B9GR78,TrEMBL:C6SYN7,TrEMBL:I1LXN4;Derives_from=GSCOCT00016474001;Name=Cc01_g16160;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016474001~ Putative unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10930.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(3353265..3353270%2C3352923..3353135%2C3352072..3352272%2C3351240..3351296));owner=coffea | |
| 21719 chr1 manual_curation exon 33899895 33900539 . + . Parent=GSCOCT00016474001 | |
| 21720 chr1 manual_curation exon 33898919 33899119 . + . Parent=GSCOCT00016474001 | |
| 21721 chr1 manual_curation exon 33898056 33898268 . + . Parent=GSCOCT00016474001 | |
| 21722 chr1 manual_curation exon 33897769 33897926 . + . Parent=GSCOCT00016474001 | |
| 21723 chr1 manual_curation CDS 33899895 33899951 . + 0 Parent=GSCOCT00016474001 | |
| 21724 chr1 manual_curation CDS 33898919 33899119 . + 0 Parent=GSCOCT00016474001 | |
| 21725 chr1 manual_curation CDS 33898056 33898268 . + 0 Parent=GSCOCT00016474001 | |
| 21726 chr1 manual_curation CDS 33897921 33897926 . + 0 Parent=GSCOCT00016474001 | |
| 21727 chr1 manual_curation gene 33903759 33904076 . - . ID=GSCOCG00016473001;Name=Cc01_g16170 | |
| 21728 chr1 manual_curation mRNA 33903759 33904076 . - . ID=GSCOCT00016473001;Parent=GSCOCG00016473001;Name=Cc01_g16170 | |
| 21729 chr1 manual_curation polypeptide 33903933 33904076 . - . ID=GSCOCP00016473001;Derives_from=GSCOCT00016473001;Name=Cc01_g16170;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016473001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=3347115..3347258;owner=coffea | |
| 21730 chr1 manual_curation exon 33903759 33904076 . - . Parent=GSCOCT00016473001 | |
| 21731 chr1 manual_curation CDS 33903933 33904076 . - 0 Parent=GSCOCT00016473001 | |
| 21732 chr1 manual_curation gene 33904178 33905433 . + . ID=GSCOCG00016472001;Name=Cc01_g16180 | |
| 21733 chr1 manual_curation mRNA 33904178 33905433 . + . ID=GSCOCT00016472001;Parent=GSCOCG00016472001;Name=Cc01_g16180 | |
| 21734 chr1 manual_curation polypeptide 33904178 33905352 . + . ID=GSCOCP00016472001;Derives_from=GSCOCT00016472001;Name=Cc01_g16180;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016472001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(3346940..3347013%2C3345839..3346274));owner=coffea | |
| 21735 chr1 manual_curation exon 33904917 33905433 . + . Parent=GSCOCT00016472001 | |
| 21736 chr1 manual_curation exon 33904178 33904251 . + . Parent=GSCOCT00016472001 | |
| 21737 chr1 manual_curation CDS 33904917 33905352 . + 2 Parent=GSCOCT00016472001 | |
| 21738 chr1 manual_curation CDS 33904178 33904251 . + 0 Parent=GSCOCT00016472001 | |
| 21739 chr1 manual_curation gene 33905872 33916345 . - . ID=GSCOCG00016471001;Name=Cc01_g16190 | |
| 21740 chr1 manual_curation mRNA 33905872 33916345 . - . ID=GSCOCT00016471001;Parent=GSCOCG00016471001;Name=Cc01_g16190 | |
| 21741 chr1 manual_curation polypeptide 33906104 33916129 . - . ID=GSCOCP00016471001;Dbxref=SwissProt:Q68CZ6,SwissProt:Q6DCY9,SwissProt:Q8QZX2,TAIR:AT5G48520.1,TrEMBL:B9SMN0,TrEMBL:D7MM26,TrEMBL:Q0WQE7;Derives_from=GSCOCT00016471001;Name=Cc01_g16190;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B Has 609 Blast hits to 593 proteins in 129 species,CC_functional_completeness:complete,CC_gene:HAUS3,CC_gene:haus3,CC_gene:Haus3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016471001~ unknown protein%3B Has 609 Blast hits to 593 proteins in 129 species: Archae - 0%3B Bacteria - 41%3B Metazoa - 390%3B Fungi - 40%3B Plants - 64%3B Viruses - 0%3B Other Eukaryotes - 74 (source: NCBI BLink).~ HAUS3~ complete;original_location=join(3335062..3335240%2C3335532..3335568%2C3335806..3335909%2C3336432..3336627%2C3337433..3337499%2C3339030..3339133%2C3340023..3340107%2C3340264..3340318%2C3341179..3341310%2C3341419..3341488%2C3342182..3342239%2C3342346..3342401%2C3342834..3342986%2C3343129..3343240%2C3343321..3343462%2C3344096..3344171%2C3344537..3344632%2C3344956..3345087);owner=coffea | |
| 21742 chr1 manual_curation exon 33915951 33916345 . - . Parent=GSCOCT00016471001 | |
| 21743 chr1 manual_curation exon 33915623 33915659 . - . Parent=GSCOCT00016471001 | |
| 21744 chr1 manual_curation exon 33915282 33915385 . - . Parent=GSCOCT00016471001 | |
| 21745 chr1 manual_curation exon 33914564 33914759 . - . Parent=GSCOCT00016471001 | |
| 21746 chr1 manual_curation exon 33913692 33913758 . - . Parent=GSCOCT00016471001 | |
| 21747 chr1 manual_curation exon 33912058 33912161 . - . Parent=GSCOCT00016471001 | |
| 21748 chr1 manual_curation exon 33911084 33911168 . - . Parent=GSCOCT00016471001 | |
| 21749 chr1 manual_curation exon 33910873 33910927 . - . Parent=GSCOCT00016471001 | |
| 21750 chr1 manual_curation exon 33909881 33910012 . - . Parent=GSCOCT00016471001 | |
| 21751 chr1 manual_curation exon 33909703 33909772 . - . Parent=GSCOCT00016471001 | |
| 21752 chr1 manual_curation exon 33908952 33909009 . - . Parent=GSCOCT00016471001 | |
| 21753 chr1 manual_curation exon 33908790 33908845 . - . Parent=GSCOCT00016471001 | |
| 21754 chr1 manual_curation exon 33908205 33908357 . - . Parent=GSCOCT00016471001 | |
| 21755 chr1 manual_curation exon 33907951 33908062 . - . Parent=GSCOCT00016471001 | |
| 21756 chr1 manual_curation exon 33907729 33907870 . - . Parent=GSCOCT00016471001 | |
| 21757 chr1 manual_curation exon 33907020 33907095 . - . Parent=GSCOCT00016471001 | |
| 21758 chr1 manual_curation exon 33906559 33906654 . - . Parent=GSCOCT00016471001 | |
| 21759 chr1 manual_curation exon 33905872 33906235 . - . Parent=GSCOCT00016471001 | |
| 21760 chr1 manual_curation CDS 33915951 33916129 . - 0 Parent=GSCOCT00016471001 | |
| 21761 chr1 manual_curation CDS 33915623 33915659 . - 2 Parent=GSCOCT00016471001 | |
| 21762 chr1 manual_curation CDS 33915282 33915385 . - 0 Parent=GSCOCT00016471001 | |
| 21763 chr1 manual_curation CDS 33914564 33914759 . - 2 Parent=GSCOCT00016471001 | |
| 21764 chr1 manual_curation CDS 33913692 33913758 . - 0 Parent=GSCOCT00016471001 | |
| 21765 chr1 manual_curation CDS 33912058 33912161 . - 1 Parent=GSCOCT00016471001 | |
| 21766 chr1 manual_curation CDS 33911084 33911168 . - 0 Parent=GSCOCT00016471001 | |
| 21767 chr1 manual_curation CDS 33910873 33910927 . - 1 Parent=GSCOCT00016471001 | |
| 21768 chr1 manual_curation CDS 33909881 33910012 . - 2 Parent=GSCOCT00016471001 | |
| 21769 chr1 manual_curation CDS 33909703 33909772 . - 2 Parent=GSCOCT00016471001 | |
| 21770 chr1 manual_curation CDS 33908952 33909009 . - 0 Parent=GSCOCT00016471001 | |
| 21771 chr1 manual_curation CDS 33908790 33908845 . - 1 Parent=GSCOCT00016471001 | |
| 21772 chr1 manual_curation CDS 33908205 33908357 . - 0 Parent=GSCOCT00016471001 | |
| 21773 chr1 manual_curation CDS 33907951 33908062 . - 0 Parent=GSCOCT00016471001 | |
| 21774 chr1 manual_curation CDS 33907729 33907870 . - 1 Parent=GSCOCT00016471001 | |
| 21775 chr1 manual_curation CDS 33907020 33907095 . - 2 Parent=GSCOCT00016471001 | |
| 21776 chr1 manual_curation CDS 33906559 33906654 . - 0 Parent=GSCOCT00016471001 | |
| 21777 chr1 manual_curation CDS 33906104 33906235 . - 0 Parent=GSCOCT00016471001 | |
| 21778 chr1 manual_curation gene 33916812 33920508 . - . ID=GSCOCG00016470001;Name=Cc01_g16200 | |
| 21779 chr1 manual_curation mRNA 33916812 33920508 . - . ID=GSCOCT00016470001;Parent=GSCOCG00016470001;Name=Cc01_g16200 | |
| 21780 chr1 manual_curation polypeptide 33917884 33920412 . - . ID=GSCOCP00016470001;Dbxref=TAIR:AT3G07440.1,TAIR:AT5G48530.1,TrEMBL:A5AYK7,TrEMBL:B9GR76,TrEMBL:B9SMM9;Derives_from=GSCOCT00016470001;Name=Cc01_g16200;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016470001~ unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48530.1)%3B Has 37 Blast hits to 37 proteins in 13 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 35%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(3330779..3331102%2C3331212..3331372%2C3331756..3331786%2C3332687..3332789%2C3333201..3333307);owner=coffea | |
| 21781 chr1 manual_curation exon 33920089 33920508 . - . Parent=GSCOCT00016470001 | |
| 21782 chr1 manual_curation exon 33919819 33919979 . - . Parent=GSCOCT00016470001 | |
| 21783 chr1 manual_curation exon 33919405 33919435 . - . Parent=GSCOCT00016470001 | |
| 21784 chr1 manual_curation exon 33918402 33918504 . - . Parent=GSCOCT00016470001 | |
| 21785 chr1 manual_curation exon 33916812 33917990 . - . Parent=GSCOCT00016470001 | |
| 21786 chr1 manual_curation CDS 33920089 33920412 . - 0 Parent=GSCOCT00016470001 | |
| 21787 chr1 manual_curation CDS 33919819 33919979 . - 0 Parent=GSCOCT00016470001 | |
| 21788 chr1 manual_curation CDS 33919405 33919435 . - 2 Parent=GSCOCT00016470001 | |
| 21789 chr1 manual_curation CDS 33918402 33918504 . - 0 Parent=GSCOCT00016470001 | |
| 21790 chr1 manual_curation CDS 33917884 33917990 . - 1 Parent=GSCOCT00016470001 | |
| 21791 chr1 manual_curation gene 33921940 33926209 . + . ID=GSCOCG00016469001;Name=Cc01_g16210 | |
| 21792 chr1 manual_curation mRNA 33921940 33926209 . + . ID=GSCOCT00016469001;Parent=GSCOCG00016469001;Name=Cc01_g16210 | |
| 21793 chr1 manual_curation polypeptide 33922249 33925802 . + . ID=GSCOCP00016469001;Dbxref=InterPro:IPR003738,PANTHER:PTHR13604,PFAM:PF02586,SwissProt:Q5ZJT1,SwissProt:Q6IND6,SwissProt:Q6P7N4,TAIR:AT2G26470.1,TrEMBL:D7UDV3,TrEMBL:G7KY24,TrEMBL:I1KYZ5;Derives_from=GSCOCT00016469001;Name=Cc01_g16210;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative UPF0361 protein C3orf37 homolog,CC_functional_completeness:modules,CC_gene:TGas027m07.1,CC_gene:RCJMB04_15p13;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016469001~ Putative UPF0361 protein C3orf37 homolog~ TGas027m07.1~ modules;original_location=complement(join(3328848..3328942%2C3328544..3328727%2C3327795..3327880%2C3326957..3327069%2C3326551..3326616%2C3326329..3326438%2C3326181..3326246%2C3325389..3325877));owner=coffea | |
| 21794 chr1 manual_curation exon 33925314 33926209 . + . Parent=GSCOCT00016469001 | |
| 21795 chr1 manual_curation exon 33924945 33925010 . + . Parent=GSCOCT00016469001 | |
| 21796 chr1 manual_curation exon 33924753 33924862 . + . Parent=GSCOCT00016469001 | |
| 21797 chr1 manual_curation exon 33924575 33924640 . + . Parent=GSCOCT00016469001 | |
| 21798 chr1 manual_curation exon 33924122 33924234 . + . Parent=GSCOCT00016469001 | |
| 21799 chr1 manual_curation exon 33923311 33923396 . + . Parent=GSCOCT00016469001 | |
| 21800 chr1 manual_curation exon 33922464 33922647 . + . Parent=GSCOCT00016469001 | |
| 21801 chr1 manual_curation exon 33921940 33922343 . + . Parent=GSCOCT00016469001 | |
| 21802 chr1 manual_curation CDS 33925314 33925802 . + 0 Parent=GSCOCT00016469001 | |
| 21803 chr1 manual_curation CDS 33924945 33925010 . + 0 Parent=GSCOCT00016469001 | |
| 21804 chr1 manual_curation CDS 33924753 33924862 . + 1 Parent=GSCOCT00016469001 | |
| 21805 chr1 manual_curation CDS 33924575 33924640 . + 1 Parent=GSCOCT00016469001 | |
| 21806 chr1 manual_curation CDS 33924122 33924234 . + 2 Parent=GSCOCT00016469001 | |
| 21807 chr1 manual_curation CDS 33923311 33923396 . + 0 Parent=GSCOCT00016469001 | |
| 21808 chr1 manual_curation CDS 33922464 33922647 . + 2 Parent=GSCOCT00016469001 | |
| 21809 chr1 manual_curation CDS 33922249 33922343 . + 0 Parent=GSCOCT00016469001 | |
| 21810 chr1 manual_curation gene 33926349 33927322 . - . ID=GSCOCG00016468001;Name=Cc01_g16220 | |
| 21811 chr1 manual_curation mRNA 33926349 33927322 . - . ID=GSCOCT00016468001;Parent=GSCOCG00016468001;Name=Cc01_g16220 | |
| 21812 chr1 manual_curation polypeptide 33926563 33927234 . - . ID=GSCOCP00016468001;Dbxref=InterPro:IPR003425,PFAM:PF02325,TAIR:AT3G07430.1,TAIR:AT4G27990.1,TAIR:AT5G21920.1,TrEMBL:B9GQQ7,TrEMBL:B9SMM7,TrEMBL:D7U9L1;Derives_from=GSCOCT00016468001;Name=Cc01_g16220;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:YGGT family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016468001~ YGGT family protein~ unknown_gene~ complete;original_location=3323957..3324628;owner=coffea | |
| 21813 chr1 manual_curation exon 33926349 33927322 . - . Parent=GSCOCT00016468001 | |
| 21814 chr1 manual_curation CDS 33926563 33927234 . - 0 Parent=GSCOCT00016468001 | |
| 21815 chr1 manual_curation gene 33929648 33930655 . - . ID=GSCOCG00016467001;Name=Cc01_g16230 | |
| 21816 chr1 manual_curation mRNA 33929648 33930655 . - . ID=GSCOCT00016467001;Parent=GSCOCG00016467001;Name=Cc01_g16230 | |
| 21817 chr1 manual_curation polypeptide 33929799 33930569 . - . ID=GSCOCP00016467001;Dbxref=InterPro:IPR003425,PFAM:PF02325,TAIR:AT3G07430.1,TAIR:AT4G27990.1,TrEMBL:B9GQQ7,TrEMBL:B9SMM7,TrEMBL:Q9SUE0;Derives_from=GSCOCT00016467001;Name=Cc01_g16230;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative Predicted protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016467001~ Putative Predicted protein~ unknown_gene~ modules;original_location=3320622..3321392;owner=coffea | |
| 21818 chr1 manual_curation exon 33929648 33930655 . - . Parent=GSCOCT00016467001 | |
| 21819 chr1 manual_curation CDS 33929799 33930569 . - 0 Parent=GSCOCT00016467001 | |
| 21820 chr1 manual_curation gene 33931898 33932194 . - . ID=GSCOCG00016466001;Name=Cc01_g16240 | |
| 21821 chr1 manual_curation mRNA 33931898 33932194 . - . ID=GSCOCT00016466001;Parent=GSCOCG00016466001;Name=Cc01_g16240 | |
| 21822 chr1 manual_curation polypeptide 33931898 33932194 . - . ID=GSCOCP00016466001;Dbxref=TrEMBL:B9GQQ6,TrEMBL:G7KY23,TrEMBL:I1KYZ7;Derives_from=GSCOCT00016466001;Name=Cc01_g16240;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Predicted protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016466001~ Predicted protein~ unknown_gene~ complete;original_location=3318997..3319293;owner=coffea | |
| 21823 chr1 manual_curation exon 33931898 33932194 . - . Parent=GSCOCT00016466001 | |
| 21824 chr1 manual_curation CDS 33931898 33932194 . - 0 Parent=GSCOCT00016466001 | |
| 21825 chr1 manual_curation gene 33936905 33937639 . - . ID=GSCOCG00016465001;Name=Cc01_g16250 | |
| 21826 chr1 manual_curation mRNA 33936905 33937639 . - . ID=GSCOCT00016465001;Parent=GSCOCG00016465001;Name=Cc01_g16250 | |
| 21827 chr1 manual_curation polypeptide 33936905 33937639 . - . ID=GSCOCP00016465001;Dbxref=InterPro:IPR004518,InterPro:IPR009039,InterPro:IPR011394,PFAM:PF03819,PIR:PIRSF029826,PROFILE:PS50912,SwissProt:Q32KY6,SwissProt:Q91VC0,SwissProt:Q9QY93,TAIR:AT3G25400.1,TrEMBL:B9GND1,TrEMBL:B9T481,TrEMBL:C6T106;Derives_from=GSCOCT00016465001;Name=Cc01_g16250;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:dCTP pyrophosphatase 1,CC_functional_completeness:fragment,CC_gene:Dctpp1,CC_gene:DCTPP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016465001~ dCTP pyrophosphatase 1~ Dctpp1~ fragment;original_location=join(3313552..3313677%2C3314038..3314286);owner=coffea | |
| 21828 chr1 manual_curation exon 33937514 33937639 . - . Parent=GSCOCT00016465001 | |
| 21829 chr1 manual_curation exon 33936905 33937153 . - . Parent=GSCOCT00016465001 | |
| 21830 chr1 manual_curation CDS 33937514 33937639 . - 0 Parent=GSCOCT00016465001 | |
| 21831 chr1 manual_curation CDS 33936905 33937153 . - 0 Parent=GSCOCT00016465001 | |
| 21832 chr1 manual_curation gene 33943694 33944405 . - . ID=GSCOCG00016463001;Name=Cc01_g16260 | |
| 21833 chr1 manual_curation mRNA 33943694 33944405 . - . ID=GSCOCT00016463001;Parent=GSCOCG00016463001;Name=Cc01_g16260 | |
| 21834 chr1 manual_curation polypeptide 33943694 33944040 . - . ID=GSCOCP00016463001;Derives_from=GSCOCT00016463001;Name=Cc01_g16260;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016463001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(3307151..3307229%2C3307373..3307497);owner=coffea | |
| 21835 chr1 manual_curation exon 33943962 33944405 . - . Parent=GSCOCT00016463001 | |
| 21836 chr1 manual_curation exon 33943694 33943818 . - . Parent=GSCOCT00016463001 | |
| 21837 chr1 manual_curation CDS 33943962 33944040 . - 0 Parent=GSCOCT00016463001 | |
| 21838 chr1 manual_curation CDS 33943694 33943818 . - 1 Parent=GSCOCT00016463001 | |
| 21839 chr1 manual_curation gene 33947571 33951012 . + . ID=GSCOCG00016461001;Name=Cc01_g16270 | |
| 21840 chr1 manual_curation mRNA 33947571 33951012 . + . ID=GSCOCT00016461001;Parent=GSCOCG00016461001;Name=Cc01_g16270 | |
| 21841 chr1 manual_curation polypeptide 33947692 33950836 . + . ID=GSCOCP00016461001;Dbxref=InterPro:IPR004364,InterPro:IPR004522,InterPro:IPR018150,PANTHER:PTHR22594,PFAM:PF00152,SwissProt:Q9SSK1,SwissProt:Q9SW95,SwissProt:Q9SW96,TAIR:AT1G70980.1,TAIR:AT3G07420.1,TAIR:AT5G56680.1,TIGRFAMs:TIGR00457,TrEMBL:A5AIG6,TrEMBL:B9GQQ2,TrEMBL:B9T485;Derives_from=GSCOCT00016461001;Name=Cc01_g16270;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0004812,GO:0004816,GO:0005524,GO:0005737,GO:0006412,GO:0006418,GO:0006421,CC_EC_number:6.1.1.22,PRODUCT:Asparagine--tRNA ligase%2C cytoplasmic 2,CC_functional_completeness:complete,CC_gene:SYNC2,CC_gene:SYNC1,CC_gene:SYNC3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016461001~ Asparagine--tRNA ligase%2C cytoplasmic 2~ SYNC2~ complete;original_location=complement(join(3303122..3303499%2C3302713..3302952%2C3301692..3302279%2C3301314..3301499%2C3301160..3301224%2C3300944..3301073%2C3300751..3300809%2C3300355..3300538));owner=coffea | |
| 21842 chr1 manual_curation exon 33950653 33951012 . + . Parent=GSCOCT00016461001 | |
| 21843 chr1 manual_curation exon 33950382 33950440 . + . Parent=GSCOCT00016461001 | |
| 21844 chr1 manual_curation exon 33950118 33950247 . + . Parent=GSCOCT00016461001 | |
| 21845 chr1 manual_curation exon 33949967 33950031 . + . Parent=GSCOCT00016461001 | |
| 21846 chr1 manual_curation exon 33949692 33949877 . + . Parent=GSCOCT00016461001 | |
| 21847 chr1 manual_curation exon 33948912 33949499 . + . Parent=GSCOCT00016461001 | |
| 21848 chr1 manual_curation exon 33948239 33948478 . + . Parent=GSCOCT00016461001 | |
| 21849 chr1 manual_curation exon 33947571 33948069 . + . Parent=GSCOCT00016461001 | |
| 21850 chr1 manual_curation CDS 33950653 33950836 . + 2 Parent=GSCOCT00016461001 | |
| 21851 chr1 manual_curation CDS 33950382 33950440 . + 0 Parent=GSCOCT00016461001 | |
| 21852 chr1 manual_curation CDS 33950118 33950247 . + 2 Parent=GSCOCT00016461001 | |
| 21853 chr1 manual_curation CDS 33949967 33950031 . + 0 Parent=GSCOCT00016461001 | |
| 21854 chr1 manual_curation CDS 33949692 33949877 . + 0 Parent=GSCOCT00016461001 | |
| 21855 chr1 manual_curation CDS 33948912 33949499 . + 0 Parent=GSCOCT00016461001 | |
| 21856 chr1 manual_curation CDS 33948239 33948478 . + 0 Parent=GSCOCT00016461001 | |
| 21857 chr1 manual_curation CDS 33947692 33948069 . + 0 Parent=GSCOCT00016461001 | |
| 21858 chr1 manual_curation gene 33951092 33952015 . - . ID=GSCOCG00016460001;Name=Cc01_g16280 | |
| 21859 chr1 manual_curation mRNA 33951092 33952015 . - . ID=GSCOCT00016460001;Parent=GSCOCG00016460001;Name=Cc01_g16280 | |
| 21860 chr1 manual_curation polypeptide 33951092 33952015 . - . ID=GSCOCP00016460001;Dbxref=InterPro:IPR002902,PFAM:PF01657,SwissProt:Q9LRJ9,SwissProt:Q9LV60,SwissProt:Q9M2I5,TAIR:AT3G22060.1,TAIR:AT3G58310.1,TAIR:AT5G48540.1,TrEMBL:A5AID0,TrEMBL:D7SSW2,TrEMBL:I1N1R5;Derives_from=GSCOCT00016460001;Name=Cc01_g16280;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Cysteine-rich repeat secretory protein 55,CC_functional_completeness:modules,CC_gene:CRRSP55,CC_gene:CRRSP38,CC_gene:CRRSP61;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016460001~ Putative Cysteine-rich repeat secretory protein 55~ CRRSP55~ modules;original_location=3299176..3300099;owner=coffea | |
| 21861 chr1 manual_curation exon 33951092 33952015 . - . Parent=GSCOCT00016460001 | |
| 21862 chr1 manual_curation CDS 33951092 33952015 . - 0 Parent=GSCOCT00016460001 | |
| 21863 chr1 manual_curation gene 33953958 33955219 . - . ID=GSCOCG00016459001;Name=Cc01_g16290 | |
| 21864 chr1 manual_curation mRNA 33953958 33955219 . - . ID=GSCOCT00016459001;Parent=GSCOCG00016459001;Name=Cc01_g16290 | |
| 21865 chr1 manual_curation polypeptide 33954431 33955219 . - . ID=GSCOCP00016459001;Dbxref=InterPro:IPR002902,PFAM:PF01657,SwissProt:Q9LRJ9,SwissProt:Q9LRL8,SwissProt:Q9LV60,TAIR:AT3G22060.1,TAIR:AT3G58310.1,TAIR:AT5G48540.1,TrEMBL:A5AID0,TrEMBL:D7SSW2,TrEMBL:I1N1R5;Derives_from=GSCOCT00016459001;Name=Cc01_g16290;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Cysteine-rich repeat secretory protein 55,CC_functional_completeness:complete,CC_gene:CRRSP55,CC_gene:CRRSP38,CC_gene:CRRSP21;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016459001~ Cysteine-rich repeat secretory protein 55~ CRRSP55~ complete;original_location=3295972..3296760;owner=coffea | |
| 21866 chr1 manual_curation exon 33953958 33955219 . - . Parent=GSCOCT00016459001 | |
| 21867 chr1 manual_curation CDS 33954431 33955219 . - 0 Parent=GSCOCT00016459001 | |
| 21868 chr1 manual_curation gene 33959285 33961980 . + . ID=GSCOCG00016458001;Name=Cc01_g16300 | |
| 21869 chr1 manual_curation mRNA 33959285 33961980 . + . ID=GSCOCT00016458001;Parent=GSCOCG00016458001;Name=Cc01_g16300 | |
| 21870 chr1 manual_curation polypeptide 33959423 33961565 . + . ID=GSCOCP00016458001;Dbxref=InterPro:IPR001806,InterPro:IPR002041,InterPro:IPR003577,InterPro:IPR003578,InterPro:IPR003579,InterPro:IPR005225,InterPro:IPR013753,InterPro:IPR015595,InterPro:IPR020851,PANTHER:PTHR11708:SF213,PFAM:PF00071,PRINTS:PR00449,PROFILE:PS51419,SMART:SM00173,SMART:SM00174,SMART:SM00175,SMART:SM00176,SwissProt:P19892,SwissProt:P28187,SwissProt:Q9SRS5,TAIR:AT1G05810.1,TAIR:AT2G43130.1,TAIR:AT3G07410.1,TIGRFAMs:TIGR00231,TrEMBL:A5B3S9,TrEMBL:A5C9K9,TrEMBL:B9SN17;Derives_from=GSCOCT00016458001;Name=Cc01_g16300;Ontology_term=CC_evidence_code:ISS,GO:0003924,GO:0005515,GO:0005525,GO:0005622,GO:0006886,GO:0006913,GO:0007165,GO:0007264,GO:0015031,CC_EC_number:missing_EC_number,PRODUCT:Ras-related protein RABA5b,CC_functional_completeness:complete,CC_gene:RABA5B,CC_gene:RABA5C,CC_gene:RABA5E;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016458001~ Ras-related protein RABA5b~ RABA5B~ complete;original_location=complement(join(3291441..3291768%2C3289626..3289945));owner=coffea | |
| 21871 chr1 manual_curation exon 33961246 33961980 . + . Parent=GSCOCT00016458001 | |
| 21872 chr1 manual_curation exon 33959285 33959750 . + . Parent=GSCOCT00016458001 | |
| 21873 chr1 manual_curation CDS 33961246 33961565 . + 1 Parent=GSCOCT00016458001 | |
| 21874 chr1 manual_curation CDS 33959423 33959750 . + 0 Parent=GSCOCT00016458001 | |
| 21875 chr1 manual_curation gene 33962353 33971461 . - . ID=GSCOCG00016457001;Name=Cc01_g16310 | |
| 21876 chr1 manual_curation mRNA 33962353 33971461 . - . ID=GSCOCT00016457001;Parent=GSCOCG00016457001;Name=Cc01_g16310 | |
| 21877 chr1 manual_curation polypeptide 33962902 33971320 . - . ID=GSCOCP00016457001;Dbxref=InterPro:IPR002921,PFAM:PF01764,TAIR:AT3G07400.1,TrEMBL:D7L6K1,TrEMBL:G7LED8,TrEMBL:I1MM65;Derives_from=GSCOCT00016457001;Name=Cc01_g16310;Ontology_term=CC_evidence_code:ISS,GO:0004806,GO:0006629,CC_EC_number:missing_EC_number,PRODUCT:lipase class 3 family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016457001~ lipase class 3 family protein~ unknown_gene~ complete;original_location=join(3279871..3280137%2C3280861..3280970%2C3282088..3282150%2C3282263..3282455%2C3282590..3282694%2C3282786..3282910%2C3282980..3283562%2C3284761..3284826%2C3285000..3285076%2C3285746..3286027%2C3286622..3286961%2C3287056..3287208%2C3287392..3287928%2C3288101..3288289);owner=coffea | |
| 21878 chr1 manual_curation exon 33971054 33971461 . - . Parent=GSCOCT00016457001 | |
| 21879 chr1 manual_curation exon 33970221 33970330 . - . Parent=GSCOCT00016457001 | |
| 21880 chr1 manual_curation exon 33969041 33969103 . - . Parent=GSCOCT00016457001 | |
| 21881 chr1 manual_curation exon 33968736 33968928 . - . Parent=GSCOCT00016457001 | |
| 21882 chr1 manual_curation exon 33968497 33968601 . - . Parent=GSCOCT00016457001 | |
| 21883 chr1 manual_curation exon 33968281 33968405 . - . Parent=GSCOCT00016457001 | |
| 21884 chr1 manual_curation exon 33967629 33968211 . - . Parent=GSCOCT00016457001 | |
| 21885 chr1 manual_curation exon 33966365 33966430 . - . Parent=GSCOCT00016457001 | |
| 21886 chr1 manual_curation exon 33966115 33966191 . - . Parent=GSCOCT00016457001 | |
| 21887 chr1 manual_curation exon 33965164 33965445 . - . Parent=GSCOCT00016457001 | |
| 21888 chr1 manual_curation exon 33964230 33964569 . - . Parent=GSCOCT00016457001 | |
| 21889 chr1 manual_curation exon 33963983 33964135 . - . Parent=GSCOCT00016457001 | |
| 21890 chr1 manual_curation exon 33963263 33963799 . - . Parent=GSCOCT00016457001 | |
| 21891 chr1 manual_curation exon 33962353 33963090 . - . Parent=GSCOCT00016457001 | |
| 21892 chr1 manual_curation CDS 33971054 33971320 . - 0 Parent=GSCOCT00016457001 | |
| 21893 chr1 manual_curation CDS 33970221 33970330 . - 0 Parent=GSCOCT00016457001 | |
| 21894 chr1 manual_curation CDS 33969041 33969103 . - 2 Parent=GSCOCT00016457001 | |
| 21895 chr1 manual_curation CDS 33968736 33968928 . - 2 Parent=GSCOCT00016457001 | |
| 21896 chr1 manual_curation CDS 33968497 33968601 . - 0 Parent=GSCOCT00016457001 | |
| 21897 chr1 manual_curation CDS 33968281 33968405 . - 0 Parent=GSCOCT00016457001 | |
| 21898 chr1 manual_curation CDS 33967629 33968211 . - 2 Parent=GSCOCT00016457001 | |
| 21899 chr1 manual_curation CDS 33966365 33966430 . - 0 Parent=GSCOCT00016457001 | |
| 21900 chr1 manual_curation CDS 33966115 33966191 . - 0 Parent=GSCOCT00016457001 | |
| 21901 chr1 manual_curation CDS 33965164 33965445 . - 2 Parent=GSCOCT00016457001 | |
| 21902 chr1 manual_curation CDS 33964230 33964569 . - 2 Parent=GSCOCT00016457001 | |
| 21903 chr1 manual_curation CDS 33963983 33964135 . - 0 Parent=GSCOCT00016457001 | |
| 21904 chr1 manual_curation CDS 33963263 33963799 . - 0 Parent=GSCOCT00016457001 | |
| 21905 chr1 manual_curation CDS 33962902 33963090 . - 0 Parent=GSCOCT00016457001 | |
| 21906 chr1 manual_curation gene 33974224 33977340 . + . ID=GSCOCG00016456001;Name=Cc01_g16320 | |
| 21907 chr1 manual_curation mRNA 33974224 33977340 . + . ID=GSCOCT00016456001;Parent=GSCOCG00016456001;Name=Cc01_g16320 | |
| 21908 chr1 manual_curation polypeptide 33974360 33976620 . + . ID=GSCOCP00016456001;Dbxref=InterPro:IPR004877,InterPro:IPR005018,InterPro:IPR006593,InterPro:IPR007613,InterPro:IPR017214,PFAM:PF03188,PFAM:PF04526,PIR:PIRSF037471,PROFILE:PS50836,PROFILE:PS50939,SMART:SM00664,SMART:SM00665,SwissProt:Q94BT2,TAIR:AT3G25290.1,TAIR:AT4G12980.1,TAIR:AT5G47530.1,TrEMBL:A9PDC9,TrEMBL:B9GQP7,TrEMBL:B9T491;Derives_from=GSCOCT00016456001;Name=Cc01_g16320;Ontology_term=CC_evidence_code:ISS,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Auxin-responsive family protein,CC_functional_completeness:complete,CC_gene:AIR12;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016456001~ Auxin-responsive family protein~ AIR12~ complete;original_location=complement(join(3276196..3276831%2C3275287..3275541%2C3274571..3274882));owner=coffea | |
| 21909 chr1 manual_curation exon 33976309 33977340 . + . Parent=GSCOCT00016456001 | |
| 21910 chr1 manual_curation exon 33975650 33975904 . + . Parent=GSCOCT00016456001 | |
| 21911 chr1 manual_curation exon 33974224 33974995 . + . Parent=GSCOCT00016456001 | |
| 21912 chr1 manual_curation CDS 33976309 33976620 . + 0 Parent=GSCOCT00016456001 | |
| 21913 chr1 manual_curation CDS 33975650 33975904 . + 0 Parent=GSCOCT00016456001 | |
| 21914 chr1 manual_curation CDS 33974360 33974995 . + 0 Parent=GSCOCT00016456001 | |
| 21915 chr1 manual_curation gene 33984025 33985025 . - . ID=GSCOCG00016455001;Name=Cc01_g16330 | |
| 21916 chr1 manual_curation mRNA 33984025 33985025 . - . ID=GSCOCT00016455001;Parent=GSCOCG00016455001;Name=Cc01_g16330 | |
| 21917 chr1 manual_curation polypeptide 33984273 33985025 . - . ID=GSCOCP00016455001;Dbxref=InterPro:IPR005018,InterPro:IPR007613,PFAM:PF04526,PROFILE:PS50836,SMART:SM00664,SwissProt:Q94BT2,TAIR:AT3G07390.1,TAIR:AT3G25290.1,TAIR:AT4G12980.1,TrEMBL:A5C9K8,TrEMBL:B9T491,TrEMBL:D7U9K7;Derives_from=GSCOCT00016455001;Name=Cc01_g16330;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Auxin-induced in root cultures protein 12,CC_functional_completeness:complete,CC_gene:AIR12;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016455001~ Putative Auxin-induced in root cultures protein 12~ AIR12~ complete;original_location=3266166..3266918;owner=coffea | |
| 21918 chr1 manual_curation exon 33984025 33985025 . - . Parent=GSCOCT00016455001 | |
| 21919 chr1 manual_curation CDS 33984273 33985025 . - 0 Parent=GSCOCT00016455001 | |
| 21920 chr1 manual_curation gene 33988509 33992030 . + . ID=GSCOCG00016454001;Name=Cc01_g16340 | |
| 21921 chr1 manual_curation mRNA 33988509 33992030 . + . ID=GSCOCT00016454001;Parent=GSCOCG00016454001;Name=Cc01_g16340 | |
| 21922 chr1 manual_curation polypeptide 33989323 33991081 . + . ID=GSCOCP00016454001;Dbxref=InterPro:IPR001515,PANTHER:PTHR23413:SF1,PFAM:PF01655,PRODOM:PD003823,SUPERFAMILY:SSF52042,SwissProt:P49211,SwissProt:P62912,SwissProt:Q9FHG2,TAIR:AT4G18100.1,TAIR:AT5G46430.1,TrEMBL:A2Z2T1,TrEMBL:B9T5H6,TrEMBL:Q0J0Q8;Derives_from=GSCOCT00016454001;Name=Cc01_g16340;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:60S ribosomal protein L32-1,CC_functional_completeness:complete,CC_gene:RPL32A,CC_gene:RPL32B,CC_gene:Rpl32;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016454001~ 60S ribosomal protein L32-1~ RPL32A~ complete;original_location=complement(join(3261779..3261868%2C3260380..3260561%2C3260110..3260239));owner=coffea | |
| 21923 chr1 manual_curation exon 33989011 33989057 . + . Parent=GSCOCT00016454001 | |
| 21924 chr1 manual_curation exon 33988509 33988573 . + . Parent=GSCOCT00016454001 | |
| 21925 chr1 manual_curation exon 33990952 33992030 . + . Parent=GSCOCT00016454001 | |
| 21926 chr1 manual_curation exon 33990630 33990811 . + . Parent=GSCOCT00016454001 | |
| 21927 chr1 manual_curation exon 33989179 33989412 . + . Parent=GSCOCT00016454001 | |
| 21928 chr1 manual_curation CDS 33990952 33991081 . + 2 Parent=GSCOCT00016454001 | |
| 21929 chr1 manual_curation CDS 33990630 33990811 . + 0 Parent=GSCOCT00016454001 | |
| 21930 chr1 manual_curation CDS 33989323 33989412 . + 0 Parent=GSCOCT00016454001 | |
| 21931 chr1 manual_curation gene 33994304 33996522 . - . ID=GSCOCG00016453001;Name=Cc01_g16350 | |
| 21932 chr1 manual_curation mRNA 33994304 33996522 . - . ID=GSCOCT00016453001;Parent=GSCOCG00016453001;Name=Cc01_g16350 | |
| 21933 chr1 manual_curation polypeptide 33994707 33996201 . - . ID=GSCOCP00016453001;Dbxref=InterPro:IPR000719,InterPro:IPR000961,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROFILE:PS51285,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:P93025,SwissProt:Q9LSF1,SwissProt:Q9ST27,TAIR:AT1G51170.1,TAIR:AT3G25250.1,TAIR:AT4G13000.1,TrEMBL:B9GQP3,TrEMBL:B9T5H7,TrEMBL:D7L6T2;Derives_from=GSCOCT00016453001;Name=Cc01_g16350;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.13,PRODUCT:Serine/threonine-protein kinase OXI1,CC_functional_completeness:complete,CC_gene:OXI1,CC_gene:PHOT2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016453001~ Serine/threonine-protein kinase OXI1~ OXI1~ complete;original_location=join(3254990..3255402%2C3255575..3256484);owner=coffea | |
| 21934 chr1 manual_curation exon 33995789 33996522 . - . Parent=GSCOCT00016453001 | |
| 21935 chr1 manual_curation exon 33994304 33995616 . - . Parent=GSCOCT00016453001 | |
| 21936 chr1 manual_curation CDS 33995789 33996201 . - 0 Parent=GSCOCT00016453001 | |
| 21937 chr1 manual_curation CDS 33994707 33995616 . - 2 Parent=GSCOCT00016453001 | |
| 21938 chr1 manual_curation gene 34003993 34007943 . + . ID=GSCOCG00016452001;Name=Cc01_g16360 | |
| 21939 chr1 manual_curation mRNA 34003993 34007943 . + . ID=GSCOCT00016452001;Parent=GSCOCG00016452001;Name=Cc01_g16360 | |
| 21940 chr1 manual_curation polypeptide 34004358 34007659 . + . ID=GSCOCP00016452001;Dbxref=GENE3D:G3DSA:3.30.428.10,InterPro:IPR001310,InterPro:IPR011146,InterPro:IPR011151,InterPro:IPR019808,PANTHER:PTHR23089,PFAM:PF01230,PRINTS:PR00332,PROFILE:PS51084,PROSITE:PS00892,SUPERFAMILY:SSF54197,SwissProt:P95937,SwissProt:Q11066,SwissProt:Q58276,TAIR:AT5G48545.1,TrEMBL:B9T5H8,TrEMBL:D7MM35,TrEMBL:Q672P8;Derives_from=GSCOCT00016452001;Name=Cc01_g16360;Ontology_term=CC_evidence_code:ISS,GO:0003824,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized HIT-like protein MJ0866,CC_functional_completeness:modules,CC_gene:Rv1262c,CC_gene:SSO2163,CC_gene:MJ0866;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016452001~ Putative Uncharacterized HIT-like protein MJ0866~ Rv1262c~ modules;original_location=complement(join(3246800..3246833%2C3246623..3246687%2C3245743..3245798%2C3244937..3244994%2C3244714..3244780%2C3243898..3243953%2C3243744..3243797%2C3243532..3243663));owner=coffea | |
| 21941 chr1 manual_curation exon 34007528 34007943 . + . Parent=GSCOCT00016452001 | |
| 21942 chr1 manual_curation exon 34007394 34007447 . + . Parent=GSCOCT00016452001 | |
| 21943 chr1 manual_curation exon 34007238 34007293 . + . Parent=GSCOCT00016452001 | |
| 21944 chr1 manual_curation exon 34006411 34006477 . + . Parent=GSCOCT00016452001 | |
| 21945 chr1 manual_curation exon 34006197 34006254 . + . Parent=GSCOCT00016452001 | |
| 21946 chr1 manual_curation exon 34005393 34005448 . + . Parent=GSCOCT00016452001 | |
| 21947 chr1 manual_curation exon 34004504 34004568 . + . Parent=GSCOCT00016452001 | |
| 21948 chr1 manual_curation exon 34003993 34004391 . + . Parent=GSCOCT00016452001 | |
| 21949 chr1 manual_curation CDS 34007528 34007659 . + 0 Parent=GSCOCT00016452001 | |
| 21950 chr1 manual_curation CDS 34007394 34007447 . + 0 Parent=GSCOCT00016452001 | |
| 21951 chr1 manual_curation CDS 34007238 34007293 . + 1 Parent=GSCOCT00016452001 | |
| 21952 chr1 manual_curation CDS 34006411 34006477 . + 0 Parent=GSCOCT00016452001 | |
| 21953 chr1 manual_curation CDS 34006197 34006254 . + 2 Parent=GSCOCT00016452001 | |
| 21954 chr1 manual_curation CDS 34005393 34005448 . + 0 Parent=GSCOCT00016452001 | |
| 21955 chr1 manual_curation CDS 34004504 34004568 . + 1 Parent=GSCOCT00016452001 | |
| 21956 chr1 manual_curation CDS 34004358 34004391 . + 0 Parent=GSCOCT00016452001 | |
| 21957 chr1 manual_curation gene 34009326 34014775 . + . ID=GSCOCG00016451001;Name=Cc01_g16370 | |
| 21958 chr1 manual_curation mRNA 34009326 34014775 . + . ID=GSCOCT00016451001;Parent=GSCOCG00016451001;Name=Cc01_g16370 | |
| 21959 chr1 manual_curation polypeptide 34009786 34014581 . + . ID=GSCOCP00016451001;Dbxref=GENE3D:G3DSA:1.25.40.10,InterPro:IPR001440,InterPro:IPR003613,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR019734,PFAM:PF00515,PFAM:PF04564,PROFILE:PS50005,PROFILE:PS50293,SMART:SM00028,SMART:SM00504,SwissProt:Q5ZHY5,SwissProt:Q9SRS9,SwissProt:Q9WUD1,TAIR:AT2G42810.2,TAIR:AT3G07370.1,TrEMBL:A5B3P2,TrEMBL:B9GQP1,TrEMBL:I1JM84;Derives_from=GSCOCT00016451001;Name=Cc01_g16370;Ontology_term=CC_evidence_code:ISS,GO:0000151,GO:0004842,GO:0005488,GO:0016567,CC_EC_number:missing_EC_number,PRODUCT:E3 ubiquitin-protein ligase CHIP,CC_functional_completeness:complete,CC_gene:CHIP,CC_gene:STUB1,CC_gene:Stub1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016451001~ E3 ubiquitin-protein ligase CHIP~ CHIP~ complete;original_location=complement(join(3241301..3241405%2C3241112..3241179%2C3240931..3240994%2C3239484..3239555%2C3237349..3237482%2C3237070..3237223%2C3236857..3236967%2C3236610..3236735));owner=coffea | |
| 21960 chr1 manual_curation exon 34014456 34014775 . + . Parent=GSCOCT00016451001 | |
| 21961 chr1 manual_curation exon 34014224 34014334 . + . Parent=GSCOCT00016451001 | |
| 21962 chr1 manual_curation exon 34013968 34014121 . + . Parent=GSCOCT00016451001 | |
| 21963 chr1 manual_curation exon 34013709 34013842 . + . Parent=GSCOCT00016451001 | |
| 21964 chr1 manual_curation exon 34011636 34011707 . + . Parent=GSCOCT00016451001 | |
| 21965 chr1 manual_curation exon 34010197 34010260 . + . Parent=GSCOCT00016451001 | |
| 21966 chr1 manual_curation exon 34010012 34010079 . + . Parent=GSCOCT00016451001 | |
| 21967 chr1 manual_curation exon 34009326 34009890 . + . Parent=GSCOCT00016451001 | |
| 21968 chr1 manual_curation CDS 34014456 34014581 . + 0 Parent=GSCOCT00016451001 | |
| 21969 chr1 manual_curation CDS 34014224 34014334 . + 0 Parent=GSCOCT00016451001 | |
| 21970 chr1 manual_curation CDS 34013968 34014121 . + 2 Parent=GSCOCT00016451001 | |
| 21971 chr1 manual_curation CDS 34013709 34013842 . + 0 Parent=GSCOCT00016451001 | |
| 21972 chr1 manual_curation CDS 34011636 34011707 . + 0 Parent=GSCOCT00016451001 | |
| 21973 chr1 manual_curation CDS 34010197 34010260 . + 2 Parent=GSCOCT00016451001 | |
| 21974 chr1 manual_curation CDS 34010012 34010079 . + 0 Parent=GSCOCT00016451001 | |
| 21975 chr1 manual_curation CDS 34009786 34009890 . + 0 Parent=GSCOCT00016451001 | |
| 21976 chr1 manual_curation gene 34017498 34020528 . - . ID=GSCOCG00016450001;Name=Cc01_g16380 | |
| 21977 chr1 manual_curation mRNA 34017498 34020528 . - . ID=GSCOCT00016450001;Parent=GSCOCG00016450001;Name=Cc01_g16380 | |
| 21978 chr1 manual_curation polypeptide 34017910 34020112 . - . ID=GSCOCP00016450001;Dbxref=GENE3D:G3DSA:1.25.10.10,InterPro:IPR000225,InterPro:IPR003613,InterPro:IPR011989,InterPro:IPR016024,PFAM:PF04564,SMART:SM00185,SMART:SM00504,SUPERFAMILY:SSF48371,SwissProt:Q3E9F7,SwissProt:Q5VRH9,SwissProt:Q9SRT0,TAIR:AT3G07360.1,TAIR:AT3G46510.1,TAIR:AT5G18320.1,TrEMBL:B9GQP0,TrEMBL:B9T5I0,TrEMBL:D7SZ16;Derives_from=GSCOCT00016450001;Name=Cc01_g16380;Ontology_term=CC_evidence_code:ISS,GO:0000151,GO:0004842,GO:0005488,GO:0016567,CC_EC_number:missing_EC_number,PRODUCT:U-box domain-containing protein 9,CC_functional_completeness:complete,CC_gene:PUB9,CC_gene:PUB46,CC_gene:PUB12;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016450001~ U-box domain-containing protein 9~ PUB9~ complete;original_location=join(3231079..3231384%2C3232196..3233281);owner=coffea | |
| 21979 chr1 manual_curation exon 34019807 34020528 . - . Parent=GSCOCT00016450001 | |
| 21980 chr1 manual_curation exon 34017498 34018995 . - . Parent=GSCOCT00016450001 | |
| 21981 chr1 manual_curation CDS 34019807 34020112 . - 0 Parent=GSCOCT00016450001 | |
| 21982 chr1 manual_curation CDS 34017910 34018995 . - 0 Parent=GSCOCT00016450001 | |
| 21983 chr1 manual_curation gene 34039637 34042327 . + . ID=GSCOCG00016448001;Name=Cc01_g16390 | |
| 21984 chr1 manual_curation mRNA 34039637 34042327 . + . ID=GSCOCT00016448001;Parent=GSCOCG00016448001;Name=Cc01_g16390 | |
| 21985 chr1 manual_curation polypeptide 34039637 34042016 . + . ID=GSCOCP00016448001;Dbxref=GENE3D:G3DSA:4.10.280.10,InterPro:IPR001092,InterPro:IPR011598,PFAM:PF00010,PROFILE:PS50888,SMART:SM00353,SUPERFAMILY:SSF47459,SwissProt:Q9FJL4,SwissProt:Q9LK48,SwissProt:Q9SRT2,TAIR:AT3G07340.1,TAIR:AT3G23690.1,TAIR:AT5G48560.1,TrEMBL:B9GQN9,TrEMBL:I1KZ15,TrEMBL:I1N1Y2;Derives_from=GSCOCT00016448001;Name=Cc01_g16390;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0030528,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative Transcription factor bHLH62,CC_functional_completeness:complete,CC_gene:BHLH62,CC_gene:BHLH78,CC_gene:BHLH77;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016448001~ Putative Transcription factor bHLH62~ BHLH62~ complete;original_location=complement(join(3211336..3211554%2C3210882..3211257%2C3210643..3210812%2C3210309..3210527%2C3210154..3210219%2C3209986..3210054%2C3209824..3209892%2C3209527..3209727%2C3209308..3209407%2C3209175..3209212));owner=coffea | |
| 21986 chr1 manual_curation exon 34041979 34042327 . + . Parent=GSCOCT00016448001 | |
| 21987 chr1 manual_curation exon 34041784 34041883 . + . Parent=GSCOCT00016448001 | |
| 21988 chr1 manual_curation exon 34041464 34041664 . + . Parent=GSCOCT00016448001 | |
| 21989 chr1 manual_curation exon 34041299 34041367 . + . Parent=GSCOCT00016448001 | |
| 21990 chr1 manual_curation exon 34041137 34041205 . + . Parent=GSCOCT00016448001 | |
| 21991 chr1 manual_curation exon 34040972 34041037 . + . Parent=GSCOCT00016448001 | |
| 21992 chr1 manual_curation exon 34040664 34040882 . + . Parent=GSCOCT00016448001 | |
| 21993 chr1 manual_curation exon 34040379 34040548 . + . Parent=GSCOCT00016448001 | |
| 21994 chr1 manual_curation exon 34039934 34040309 . + . Parent=GSCOCT00016448001 | |
| 21995 chr1 manual_curation exon 34039637 34039855 . + . Parent=GSCOCT00016448001 | |
| 21996 chr1 manual_curation CDS 34041979 34042016 . + 1 Parent=GSCOCT00016448001 | |
| 21997 chr1 manual_curation CDS 34041784 34041883 . + 0 Parent=GSCOCT00016448001 | |
| 21998 chr1 manual_curation CDS 34041464 34041664 . + 0 Parent=GSCOCT00016448001 | |
| 21999 chr1 manual_curation CDS 34041299 34041367 . + 0 Parent=GSCOCT00016448001 | |
| 22000 chr1 manual_curation CDS 34041137 34041205 . + 0 Parent=GSCOCT00016448001 | |
| 22001 chr1 manual_curation CDS 34040972 34041037 . + 0 Parent=GSCOCT00016448001 | |
| 22002 chr1 manual_curation CDS 34040664 34040882 . + 0 Parent=GSCOCT00016448001 | |
| 22003 chr1 manual_curation CDS 34040379 34040548 . + 1 Parent=GSCOCT00016448001 | |
| 22004 chr1 manual_curation CDS 34039934 34040309 . + 0 Parent=GSCOCT00016448001 | |
| 22005 chr1 manual_curation CDS 34039637 34039855 . + 0 Parent=GSCOCT00016448001 | |
| 22006 chr1 manual_curation gene 34046505 34049283 . - . ID=GSCOCG00016447001;Name=Cc01_g16400 | |
| 22007 chr1 manual_curation mRNA 34046505 34049283 . - . ID=GSCOCT00016447001;Parent=GSCOCG00016447001;Name=Cc01_g16400 | |
| 22008 chr1 manual_curation polypeptide 34046848 34049022 . - . ID=GSCOCP00016447001;Dbxref=InterPro:IPR001047,InterPro:IPR018283,InterPro:IPR022309,PFAM:PF01201,PROSITE:PS01193,SwissProt:P49199,SwissProt:Q08069,SwissProt:Q9FIF3,TAIR:AT5G20290.1,TAIR:AT5G59240.1,TIGRFAMs:TIGR00307,TrEMBL:B4FE90,TrEMBL:C0PCV2,TrEMBL:C5YDP0;Derives_from=GSCOCT00016447001;Name=Cc01_g16400;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:40S ribosomal protein S8,CC_functional_completeness:complete,CC_gene:RPS8,CC_gene:RPS8B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016447001~ 40S ribosomal protein S8~ RPS8~ complete;original_location=join(3202169..3202224%2C3203172..3203502%2C3203984..3204153%2C3204259..3204343);owner=coffea | |
| 22009 chr1 manual_curation exon 34049159 34049283 . - . Parent=GSCOCT00016447001 | |
| 22010 chr1 manual_curation exon 34048967 34049039 . - . Parent=GSCOCT00016447001 | |
| 22011 chr1 manual_curation exon 34047689 34048019 . - . Parent=GSCOCT00016447001 | |
| 22012 chr1 manual_curation exon 34047038 34047207 . - . Parent=GSCOCT00016447001 | |
| 22013 chr1 manual_curation exon 34046505 34046932 . - . Parent=GSCOCT00016447001 | |
| 22014 chr1 manual_curation CDS 34048967 34049022 . - 0 Parent=GSCOCT00016447001 | |
| 22015 chr1 manual_curation CDS 34047689 34048019 . - 2 Parent=GSCOCT00016447001 | |
| 22016 chr1 manual_curation CDS 34047038 34047207 . - 0 Parent=GSCOCT00016447001 | |
| 22017 chr1 manual_curation CDS 34046848 34046932 . - 2 Parent=GSCOCT00016447001 | |
| 22018 chr1 manual_curation gene 34051516 34056036 . - . ID=GSCOCG00016445001;Name=Cc01_g16410 | |
| 22019 chr1 manual_curation mRNA 34051516 34056036 . - . ID=GSCOCT00016445001;Parent=GSCOCG00016445001;Name=Cc01_g16410 | |
| 22020 chr1 manual_curation polypeptide 34052295 34055792 . - . ID=GSCOCP00016445001;Dbxref=GENE3D:G3DSA:1.25.40.10,InterPro:IPR001179,InterPro:IPR001440,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR019734,PANTHER:PTHR10516,PFAM:PF00254,PFAM:PF00515,PROFILE:PS50005,PROFILE:PS50059,PROFILE:PS50293,SMART:SM00028,SwissProt:Q38931,SwissProt:Q43207,SwissProt:Q9FJL3,TAIR:AT3G25230.2,TAIR:AT3G54010.1,TAIR:AT5G48570.1,TrEMBL:B9TA12,TrEMBL:D7TGC8,TrEMBL:G5ELZ2;Derives_from=GSCOCT00016445001;Name=Cc01_g16410;Ontology_term=CC_evidence_code:ISS,GO:0005488,GO:0006457,CC_EC_number:missing_EC_number,PRODUCT:Peptidyl-prolyl cis-trans isomerase FKBP62,CC_functional_completeness:complete,CC_gene:FKBP62,CC_gene:FKBP65,CC_gene:FKBP70;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016445001~ Peptidyl-prolyl cis-trans isomerase FKBP62~ FKBP62~ complete;original_location=join(3195399..3195585%2C3195685..3195771%2C3196515..3196775%2C3196864..3196938%2C3197029..3197109%2C3197197..3197391%2C3197497..3197592%2C3197678..3197853%2C3197954..3198076%2C3198161..3198307%2C3198387..3198514%2C3198635..3198755%2C3198846..3198896);owner=coffea | |
| 22021 chr1 manual_curation exon 34055606 34056036 . - . Parent=GSCOCT00016445001 | |
| 22022 chr1 manual_curation exon 34055420 34055506 . - . Parent=GSCOCT00016445001 | |
| 22023 chr1 manual_curation exon 34054416 34054676 . - . Parent=GSCOCT00016445001 | |
| 22024 chr1 manual_curation exon 34054253 34054327 . - . Parent=GSCOCT00016445001 | |
| 22025 chr1 manual_curation exon 34054082 34054162 . - . Parent=GSCOCT00016445001 | |
| 22026 chr1 manual_curation exon 34053800 34053994 . - . Parent=GSCOCT00016445001 | |
| 22027 chr1 manual_curation exon 34053599 34053694 . - . Parent=GSCOCT00016445001 | |
| 22028 chr1 manual_curation exon 34053338 34053513 . - . Parent=GSCOCT00016445001 | |
| 22029 chr1 manual_curation exon 34053115 34053237 . - . Parent=GSCOCT00016445001 | |
| 22030 chr1 manual_curation exon 34052884 34053030 . - . Parent=GSCOCT00016445001 | |
| 22031 chr1 manual_curation exon 34052677 34052804 . - . Parent=GSCOCT00016445001 | |
| 22032 chr1 manual_curation exon 34052436 34052556 . - . Parent=GSCOCT00016445001 | |
| 22033 chr1 manual_curation exon 34051516 34052345 . - . Parent=GSCOCT00016445001 | |
| 22034 chr1 manual_curation CDS 34055606 34055792 . - 0 Parent=GSCOCT00016445001 | |
| 22035 chr1 manual_curation CDS 34055420 34055506 . - 1 Parent=GSCOCT00016445001 | |
| 22036 chr1 manual_curation CDS 34054416 34054676 . - 1 Parent=GSCOCT00016445001 | |
| 22037 chr1 manual_curation CDS 34054253 34054327 . - 1 Parent=GSCOCT00016445001 | |
| 22038 chr1 manual_curation CDS 34054082 34054162 . - 1 Parent=GSCOCT00016445001 | |
| 22039 chr1 manual_curation CDS 34053800 34053994 . - 1 Parent=GSCOCT00016445001 | |
| 22040 chr1 manual_curation CDS 34053599 34053694 . - 1 Parent=GSCOCT00016445001 | |
| 22041 chr1 manual_curation CDS 34053338 34053513 . - 1 Parent=GSCOCT00016445001 | |
| 22042 chr1 manual_curation CDS 34053115 34053237 . - 0 Parent=GSCOCT00016445001 | |
| 22043 chr1 manual_curation CDS 34052884 34053030 . - 0 Parent=GSCOCT00016445001 | |
| 22044 chr1 manual_curation CDS 34052677 34052804 . - 0 Parent=GSCOCT00016445001 | |
| 22045 chr1 manual_curation CDS 34052436 34052556 . - 2 Parent=GSCOCT00016445001 | |
| 22046 chr1 manual_curation CDS 34052295 34052345 . - 0 Parent=GSCOCT00016445001 | |
| 22047 chr1 manual_curation gene 34057630 34061125 . - . ID=GSCOCG00016444001;Name=Cc01_g16420 | |
| 22048 chr1 manual_curation mRNA 34057630 34061125 . - . ID=GSCOCT00016444001;Parent=GSCOCG00016444001;Name=Cc01_g16420 | |
| 22049 chr1 manual_curation polypeptide 34058046 34061075 . - . ID=GSCOCP00016444001;Dbxref=InterPro:IPR001179,PANTHER:PTHR10516,PFAM:PF00254,PROFILE:PS50059,SwissProt:Q38935,SwissProt:Q38936,SwissProt:Q41649,TAIR:AT3G25220.1,TAIR:AT3G25230.2,TAIR:AT5G48580.1,TrEMBL:A9PJK0,TrEMBL:B9T7Z1,TrEMBL:D7UDY0;Derives_from=GSCOCT00016444001;Name=Cc01_g16420;Ontology_term=CC_evidence_code:ISS,GO:0006457,CC_EC_number:missing_EC_number,PRODUCT:Peptidyl-prolyl cis-trans isomerase FKBP15-1,CC_functional_completeness:complete,CC_gene:FKBP15-1,CC_gene:FKBP15-2,CC_gene:FKBP15;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016444001~ Peptidyl-prolyl cis-trans isomerase FKBP15-1~ FKBP15-1~ complete;original_location=join(3190116..3190170%2C3190342..3190391%2C3190849..3190911%2C3191630..3191720%2C3192555..3192659%2C3193057..3193145);owner=coffea | |
| 22050 chr1 manual_curation exon 34061021 34061125 . - . Parent=GSCOCT00016444001 | |
| 22051 chr1 manual_curation exon 34060800 34060849 . - . Parent=GSCOCT00016444001 | |
| 22052 chr1 manual_curation exon 34060280 34060342 . - . Parent=GSCOCT00016444001 | |
| 22053 chr1 manual_curation exon 34059471 34059561 . - . Parent=GSCOCT00016444001 | |
| 22054 chr1 manual_curation exon 34058532 34058636 . - . Parent=GSCOCT00016444001 | |
| 22055 chr1 manual_curation exon 34057630 34058134 . - . Parent=GSCOCT00016444001 | |
| 22056 chr1 manual_curation CDS 34061021 34061075 . - 0 Parent=GSCOCT00016444001 | |
| 22057 chr1 manual_curation CDS 34060800 34060849 . - 1 Parent=GSCOCT00016444001 | |
| 22058 chr1 manual_curation CDS 34060280 34060342 . - 0 Parent=GSCOCT00016444001 | |
| 22059 chr1 manual_curation CDS 34059471 34059561 . - 0 Parent=GSCOCT00016444001 | |
| 22060 chr1 manual_curation CDS 34058532 34058636 . - 1 Parent=GSCOCT00016444001 | |
| 22061 chr1 manual_curation CDS 34058046 34058134 . - 1 Parent=GSCOCT00016444001 | |
| 22062 chr1 manual_curation gene 34063798 34067029 . + . ID=GSCOCG00016443001;Name=Cc01_g16430 | |
| 22063 chr1 manual_curation mRNA 34063798 34067029 . + . ID=GSCOCT00016443001;Parent=GSCOCG00016443001;Name=Cc01_g16430 | |
| 22064 chr1 manual_curation polypeptide 34063798 34067029 . + . ID=GSCOCP00016443001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:C0LGW6,SwissProt:P43298,SwissProt:Q8GUQ5,TAIR:AT1G66150.1,TAIR:AT2G01820.1,TAIR:AT3G23750.1,TrEMBL:A5AXB9,TrEMBL:D7U9J9,TrEMBL:F6I4B8;Derives_from=GSCOCT00016443001;Name=Cc01_g16430;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.10.2,PRODUCT:Probable receptor protein kinase TMK1,CC_functional_completeness:complete,CC_gene:TMK1,CC_gene:ERL1,CC_gene:CURL3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016443001~ Probable receptor protein kinase TMK1~ TMK1~ complete;original_location=complement(join(3185167..3187393%2C3184162..3184667));owner=coffea | |
| 22065 chr1 manual_curation exon 34066524 34067029 . + . Parent=GSCOCT00016443001 | |
| 22066 chr1 manual_curation exon 34063798 34066024 . + . Parent=GSCOCT00016443001 | |
| 22067 chr1 manual_curation CDS 34066524 34067029 . + 1 Parent=GSCOCT00016443001 | |
| 22068 chr1 manual_curation CDS 34063798 34066024 . + 0 Parent=GSCOCT00016443001 | |
| 22069 chr1 manual_curation gene 34067464 34069381 . - . ID=GSCOCG00016442001;Name=Cc01_g16440 | |
| 22070 chr1 manual_curation mRNA 34067464 34069381 . - . ID=GSCOCT00016442001;Parent=GSCOCG00016442001;Name=Cc01_g16440 | |
| 22071 chr1 manual_curation polypeptide 34068227 34069381 . - . ID=GSCOCP00016442001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q9FNL2,SwissProt:Q9LSF5,SwissProt:Q9ZUY1,TAIR:AT2G27800.1,TAIR:AT3G25210.1,TAIR:AT5G46100.1,TIGRFAMs:TIGR00756,TrEMBL:B9GQN5,TrEMBL:B9T7Z0,TrEMBL:F6H193;Derives_from=GSCOCT00016442001;Name=Cc01_g16440;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At3g25210%2C mitochondrial,CC_functional_completeness:complete,CC_gene:At3g25210,CC_gene:At2g27800,CC_gene:At5g46100;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016442001~ Pentatricopeptide repeat-containing protein At3g25210%2C mitochondrial~ At3g25210~ complete;original_location=3181810..3182964;owner=coffea | |
| 22072 chr1 manual_curation exon 34067464 34069381 . - . Parent=GSCOCT00016442001 | |
| 22073 chr1 manual_curation CDS 34068227 34069381 . - 0 Parent=GSCOCT00016442001 | |
| 22074 chr1 manual_curation gene 34076261 34078361 . + . ID=GSCOCG00016440001;Name=Cc01_g16450 | |
| 22075 chr1 manual_curation mRNA 34076261 34078361 . + . ID=GSCOCT00016440001;Parent=GSCOCG00016440001;Name=Cc01_g16450 | |
| 22076 chr1 manual_curation polypeptide 34076343 34078361 . + . ID=GSCOCP00016440001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR000490,InterPro:IPR012946,InterPro:IPR013781,InterPro:IPR017853,PFAM:PF00332,PFAM:PF07983,SMART:SM00768,SUPERFAMILY:SSF51445,SwissProt:Q06915,SwissProt:Q8VYE5,SwissProt:Q9FJU9,TAIR:AT3G07320.1,TAIR:AT3G23770.1,TAIR:AT4G14080.1,TrEMBL:B9NHS7,TrEMBL:D7U9Q6,TrEMBL:G7LF67;Derives_from=GSCOCT00016440001;Name=Cc01_g16450;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0043169,CC_EC_number:3.2.1.39,PRODUCT:Putative Probable glucan endo-1%2C3-beta-glucosidase A6,CC_functional_completeness:complete,CC_gene:A6,CC_gene:At5g56590,CC_gene:At4g29360;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016440001~ Putative Probable glucan endo-1%2C3-beta-glucosidase A6~ A6~ complete;original_location=complement(join(3174785..3174848%2C3173994..3174676%2C3173378..3173849%2C3172830..3172867));owner=coffea | |
| 22077 chr1 manual_curation exon 34078324 34078361 . + . Parent=GSCOCT00016440001 | |
| 22078 chr1 manual_curation exon 34077342 34077813 . + . Parent=GSCOCT00016440001 | |
| 22079 chr1 manual_curation exon 34076515 34077197 . + . Parent=GSCOCT00016440001 | |
| 22080 chr1 manual_curation exon 34076261 34076406 . + . Parent=GSCOCT00016440001 | |
| 22081 chr1 manual_curation CDS 34078324 34078361 . + 1 Parent=GSCOCT00016440001 | |
| 22082 chr1 manual_curation CDS 34077342 34077813 . + 0 Parent=GSCOCT00016440001 | |
| 22083 chr1 manual_curation CDS 34076515 34077197 . + 1 Parent=GSCOCT00016440001 | |
| 22084 chr1 manual_curation CDS 34076343 34076406 . + 0 Parent=GSCOCT00016440001 | |
| 22085 chr1 manual_curation gene 34083410 34085555 . - . ID=GSCOCG00016438001;Name=Cc01_g16460 | |
| 22086 chr1 manual_curation mRNA 34083410 34085555 . - . ID=GSCOCT00016438001;Parent=GSCOCG00016438001;Name=Cc01_g16460 | |
| 22087 chr1 manual_curation polypeptide 34084434 34085555 . - . ID=GSCOCP00016438001;Dbxref=GENE3D:G3DSA:2.40.50.140,InterPro:IPR001339,InterPro:IPR012340,InterPro:IPR013846,InterPro:IPR016027,PFAM:PF01331,PFAM:PF03919,SUPERFAMILY:SSF50249,SwissProt:O55236,SwissProt:O60942,SwissProt:Q6NY98,TAIR:AT3G09100.2,TAIR:AT5G01290.1,TAIR:AT5G28210.1,TrEMBL:G7JLW4,TrEMBL:I1J767,TrEMBL:I1JLS0;Derives_from=GSCOCT00016438001;Name=Cc01_g16460;Ontology_term=CC_evidence_code:ISS,GO:0004484,GO:0006370,GO:0006397,CC_EC_number:2.7.7.50,PRODUCT:Putative mRNA-capping enzyme,CC_functional_completeness:fragment,CC_gene:RNGTT,CC_gene:Rngtt,CC_gene:rngtt;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016438001~ Putative mRNA-capping enzyme~ RNGTT~ fragment;original_location=3165636..3166757;owner=coffea | |
| 22088 chr1 manual_curation exon 34083410 34085555 . - . Parent=GSCOCT00016438001 | |
| 22089 chr1 manual_curation CDS 34084434 34085555 . - 0 Parent=GSCOCT00016438001 | |
| 22090 chr1 manual_curation gene 34094364 34098826 . + . ID=GSCOCG00016437001;Name=Cc01_g16470 | |
| 22091 chr1 manual_curation mRNA 34094364 34098826 . + . ID=GSCOCT00016437001;Parent=GSCOCG00016437001;Name=Cc01_g16470 | |
| 22092 chr1 manual_curation polypeptide 34094451 34097891 . + . ID=GSCOCP00016437001;Dbxref=InterPro:IPR008479,PFAM:PF05542,TAIR:AT1G48450.1,TAIR:AT3G07310.1,TAIR:AT5G48590.1,TrEMBL:B9SYK3,TrEMBL:I1JM64,TrEMBL:I1MM94;Derives_from=GSCOCT00016437001;Name=Cc01_g16470;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of unknown function (DUF760),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016437001~ Putative Protein of unknown function (DUF760)~ unknown_gene~ complete;original_location=complement(join(3156340..3156740%2C3153300..3154101));owner=coffea | |
| 22093 chr1 manual_curation exon 34097090 34098826 . + . Parent=GSCOCT00016437001 | |
| 22094 chr1 manual_curation exon 34094364 34094851 . + . Parent=GSCOCT00016437001 | |
| 22095 chr1 manual_curation CDS 34097090 34097891 . + 2 Parent=GSCOCT00016437001 | |
| 22096 chr1 manual_curation CDS 34094451 34094851 . + 0 Parent=GSCOCT00016437001 | |
| 22097 chr1 manual_curation gene 34100309 34103666 . + . ID=GSCOCG00016435001;Name=Cc01_g16480 | |
| 22098 chr1 manual_curation mRNA 34100309 34103666 . + . ID=GSCOCT00016435001;Parent=GSCOCG00016435001;Name=Cc01_g16480 | |
| 22099 chr1 manual_curation polypeptide 34100682 34103350 . + . ID=GSCOCP00016435001;Dbxref=InterPro:IPR002085,InterPro:IPR011032,InterPro:IPR013149,InterPro:IPR013154,InterPro:IPR020843,PANTHER:PTHR11695,PFAM:PF00107,PFAM:PF08240,SMART:SM00829,SUPERFAMILY:SSF50129,SwissProt:Q8H0M1,SwissProt:Q9SV68,SwissProt:Q9ZUC1,TAIR:AT1G23740.1,TAIR:AT3G15090.1,TAIR:AT4G13010.1,TrEMBL:A9PIJ1,TrEMBL:B9GIK0,TrEMBL:E4MYC0;Derives_from=GSCOCT00016435001;Name=Cc01_g16480;Ontology_term=CC_evidence_code:ISS,GO:0008270,GO:0016491,GO:0055114,CC_EC_number:1.6.5.5,PRODUCT:Putative quinone-oxidoreductase homolog%2C chloroplastic,CC_functional_completeness:complete,CC_gene:At4g13010,CC_gene:QOR,CC_gene:At1g23740;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016435001~ Putative quinone-oxidoreductase homolog%2C chloroplastic~ At4g13010~ complete;original_location=complement(join(3150444..3150509%2C3150070..3150211%2C3149008..3149099%2C3147841..3148530));owner=coffea | |
| 22100 chr1 manual_curation exon 34100309 34100552 . + . Parent=GSCOCT00016435001 | |
| 22101 chr1 manual_curation exon 34102661 34103666 . + . Parent=GSCOCT00016435001 | |
| 22102 chr1 manual_curation exon 34102092 34102183 . + . Parent=GSCOCT00016435001 | |
| 22103 chr1 manual_curation exon 34100980 34101121 . + . Parent=GSCOCT00016435001 | |
| 22104 chr1 manual_curation exon 34100663 34100747 . + . Parent=GSCOCT00016435001 | |
| 22105 chr1 manual_curation CDS 34102661 34103350 . + 0 Parent=GSCOCT00016435001 | |
| 22106 chr1 manual_curation CDS 34102092 34102183 . + 1 Parent=GSCOCT00016435001 | |
| 22107 chr1 manual_curation CDS 34100980 34101121 . + 0 Parent=GSCOCT00016435001 | |
| 22108 chr1 manual_curation CDS 34100682 34100747 . + 0 Parent=GSCOCT00016435001 | |
| 22109 chr1 manual_curation gene 34108681 34115887 . + . ID=GSCOCG00016434001;Name=Cc01_g16490 | |
| 22110 chr1 manual_curation mRNA 34108681 34115887 . + . ID=GSCOCT00016434001;Parent=GSCOCG00016434001;Name=Cc01_g16490 | |
| 22111 chr1 manual_curation polypeptide 34110174 34115533 . + . ID=GSCOCP00016434001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:P43294,SwissProt:Q6Z8C8,SwissProt:Q84SN3,TAIR:AT4G13020.3,TAIR:AT4G19110.2,TAIR:AT5G45430.1,TrEMBL:B9GQM9,TrEMBL:B9SYK7,TrEMBL:F6HWJ3;Derives_from=GSCOCT00016434001;Name=Cc01_g16490;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.22,PRODUCT:Serine/threonine-protein kinase MHK,CC_functional_completeness:complete,CC_gene:MHK,CC_gene:CDKF-3,CC_gene:CDKF-4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016434001~ Serine/threonine-protein kinase MHK~ MHK~ complete;original_location=complement(join(3140883..3141017%2C3140715..3140777%2C3140507..3140596%2C3139743..3139881%2C3139529..3139631%2C3139390..3139442%2C3138393..3138459%2C3137997..3138105%2C3137801..3137866%2C3137613..3137681%2C3137474..3137534%2C3137287..3137391%2C3136830..3136861%2C3136693..3136738%2C3136355..3136430%2C3135658..3135787));owner=coffea | |
| 22112 chr1 manual_curation exon 34115404 34115887 . + . Parent=GSCOCT00016434001 | |
| 22113 chr1 manual_curation exon 34114761 34114836 . + . Parent=GSCOCT00016434001 | |
| 22114 chr1 manual_curation exon 34114453 34114498 . + . Parent=GSCOCT00016434001 | |
| 22115 chr1 manual_curation exon 34114330 34114361 . + . Parent=GSCOCT00016434001 | |
| 22116 chr1 manual_curation exon 34113800 34113904 . + . Parent=GSCOCT00016434001 | |
| 22117 chr1 manual_curation exon 34113657 34113717 . + . Parent=GSCOCT00016434001 | |
| 22118 chr1 manual_curation exon 34113510 34113578 . + . Parent=GSCOCT00016434001 | |
| 22119 chr1 manual_curation exon 34113325 34113390 . + . Parent=GSCOCT00016434001 | |
| 22120 chr1 manual_curation exon 34113086 34113194 . + . Parent=GSCOCT00016434001 | |
| 22121 chr1 manual_curation exon 34112732 34112798 . + . Parent=GSCOCT00016434001 | |
| 22122 chr1 manual_curation exon 34111749 34111801 . + . Parent=GSCOCT00016434001 | |
| 22123 chr1 manual_curation exon 34111560 34111662 . + . Parent=GSCOCT00016434001 | |
| 22124 chr1 manual_curation exon 34111310 34111448 . + . Parent=GSCOCT00016434001 | |
| 22125 chr1 manual_curation exon 34110595 34110684 . + . Parent=GSCOCT00016434001 | |
| 22126 chr1 manual_curation exon 34110414 34110476 . + . Parent=GSCOCT00016434001 | |
| 22127 chr1 manual_curation exon 34108681 34110308 . + . Parent=GSCOCT00016434001 | |
| 22128 chr1 manual_curation CDS 34115404 34115533 . + 2 Parent=GSCOCT00016434001 | |
| 22129 chr1 manual_curation CDS 34114761 34114836 . + 1 Parent=GSCOCT00016434001 | |
| 22130 chr1 manual_curation CDS 34114453 34114498 . + 0 Parent=GSCOCT00016434001 | |
| 22131 chr1 manual_curation CDS 34114330 34114361 . + 1 Parent=GSCOCT00016434001 | |
| 22132 chr1 manual_curation CDS 34113800 34113904 . + 1 Parent=GSCOCT00016434001 | |
| 22133 chr1 manual_curation CDS 34113657 34113717 . + 0 Parent=GSCOCT00016434001 | |
| 22134 chr1 manual_curation CDS 34113510 34113578 . + 0 Parent=GSCOCT00016434001 | |
| 22135 chr1 manual_curation CDS 34113325 34113390 . + 0 Parent=GSCOCT00016434001 | |
| 22136 chr1 manual_curation CDS 34113086 34113194 . + 2 Parent=GSCOCT00016434001 | |
| 22137 chr1 manual_curation CDS 34112732 34112798 . + 1 Parent=GSCOCT00016434001 | |
| 22138 chr1 manual_curation CDS 34111749 34111801 . + 2 Parent=GSCOCT00016434001 | |
| 22139 chr1 manual_curation CDS 34111560 34111662 . + 1 Parent=GSCOCT00016434001 | |
| 22140 chr1 manual_curation CDS 34111310 34111448 . + 0 Parent=GSCOCT00016434001 | |
| 22141 chr1 manual_curation CDS 34110595 34110684 . + 0 Parent=GSCOCT00016434001 | |
| 22142 chr1 manual_curation CDS 34110414 34110476 . + 0 Parent=GSCOCT00016434001 | |
| 22143 chr1 manual_curation CDS 34110174 34110308 . + 0 Parent=GSCOCT00016434001 | |
| 22144 chr1 manual_curation gene 34116209 34118376 . + . ID=GSCOCG00016433001;Name=Cc01_g16500 | |
| 22145 chr1 manual_curation mRNA 34116209 34118376 . + . ID=GSCOCT00016433001;Parent=GSCOCG00016433001;Name=Cc01_g16500 | |
| 22146 chr1 manual_curation polypeptide 34116908 34118376 . + . ID=GSCOCP00016433001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,PROSITE:PS00375,SwissProt:O22820,SwissProt:O22822,SwissProt:P0C7P7,TAIR:AT1G05675.1,TAIR:AT2G43820.1,TAIR:AT2G43840.2,TrEMBL:B9T2H3,TrEMBL:B9T2H4,TrEMBL:C6KI44;Derives_from=GSCOCT00016433001;Name=Cc01_g16500;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.121,PRODUCT:Putative UDP-glycosyltransferase 74F2,CC_functional_completeness:complete,CC_gene:UGT74F2,CC_gene:UGT74F1,CC_gene:UGT74E1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016433001~ Putative UDP-glycosyltransferase 74F2~ UGT74F2~ complete;original_location=complement(join(3133639..3134283%2C3132815..3133555));owner=coffea | |
| 22147 chr1 manual_curation exon 34117636 34118376 . + . Parent=GSCOCT00016433001 | |
| 22148 chr1 manual_curation exon 34116209 34117552 . + . Parent=GSCOCT00016433001 | |
| 22149 chr1 manual_curation CDS 34117636 34118376 . + 0 Parent=GSCOCT00016433001 | |
| 22150 chr1 manual_curation CDS 34116908 34117552 . + 0 Parent=GSCOCT00016433001 | |
| 22151 chr1 manual_curation gene 34119848 34122005 . - . ID=GSCOCG00016432001;Name=Cc01_g16510 | |
| 22152 chr1 manual_curation mRNA 34119848 34122005 . - . ID=GSCOCT00016432001;Parent=GSCOCG00016432001;Name=Cc01_g16510 | |
| 22153 chr1 manual_curation polypeptide 34120146 34121573 . - . ID=GSCOCP00016432001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,SwissProt:Q43716,SwissProt:Q9FN26,SwissProt:Q9FN28,TAIR:AT4G27560.1,TAIR:AT5G53990.1,TAIR:AT5G54010.1,TrEMBL:A4GRS3,TrEMBL:A4GRT4,TrEMBL:A4GRU4;Derives_from=GSCOCT00016432001;Name=Cc01_g16510;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:Anthocyanidin 3-O-glucosyltransferase,CC_functional_completeness:complete,CC_gene:RT,CC_gene:UGT79B6,CC_gene:UGT79B9;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016432001~ Anthocyanidin 3-O-glucosyltransferase~ RT~ complete;original_location=3129618..3131045;owner=coffea | |
| 22154 chr1 manual_curation exon 34119848 34122005 . - . Parent=GSCOCT00016432001 | |
| 22155 chr1 manual_curation CDS 34120146 34121573 . - 0 Parent=GSCOCT00016432001 | |
| 22156 chr1 manual_curation gene 34126936 34133949 . + . ID=GSCOCG00016431001;Name=Cc01_g16520 | |
| 22157 chr1 manual_curation mRNA 34126936 34133949 . + . ID=GSCOCT00016431001;Parent=GSCOCG00016431001;Name=Cc01_g16520 | |
| 22158 chr1 manual_curation polypeptide 34128410 34133297 . + . ID=GSCOCP00016431001;Dbxref=TAIR:AT5G43490.1,TrEMBL:B9SYL1,TrEMBL:B9SYL2,TrEMBL:D7SNQ8;Derives_from=GSCOCT00016431001;Name=Cc01_g16520;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B Has 1807 Blast hits to 1807 proteins in 277 species,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016431001~ Putative unknown protein%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).~ unknown_gene~ modules;original_location=complement(join(3122701..3122781%2C3119128..3119986%2C3117894..3118780));owner=coffea | |
| 22159 chr1 manual_curation exon 34128016 34128088 . + . Parent=GSCOCT00016431001 | |
| 22160 chr1 manual_curation exon 34126936 34127240 . + . Parent=GSCOCT00016431001 | |
| 22161 chr1 manual_curation exon 34132411 34133949 . + . Parent=GSCOCT00016431001 | |
| 22162 chr1 manual_curation exon 34131205 34132063 . + . Parent=GSCOCT00016431001 | |
| 22163 chr1 manual_curation exon 34128186 34128490 . + . Parent=GSCOCT00016431001 | |
| 22164 chr1 manual_curation CDS 34132411 34133297 . + 1 Parent=GSCOCT00016431001 | |
| 22165 chr1 manual_curation CDS 34131205 34132063 . + 0 Parent=GSCOCT00016431001 | |
| 22166 chr1 manual_curation CDS 34128410 34128490 . + 0 Parent=GSCOCT00016431001 | |
| 22167 chr1 manual_curation gene 34135701 34139161 . + . ID=GSCOCG00016430001;Name=Cc01_g16530 | |
| 22168 chr1 manual_curation mRNA 34135701 34139161 . + . ID=GSCOCT00016430001;Parent=GSCOCG00016430001;Name=Cc01_g16530 | |
| 22169 chr1 manual_curation polypeptide 34135793 34138883 . + . ID=GSCOCP00016430001;Dbxref=TAIR:AT4G13030.1,TrEMBL:B9GQM8,TrEMBL:B9SYL4,TrEMBL:F6HRH6;Derives_from=GSCOCT00016430001;Name=Cc01_g16530;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:ATP binding protein%2C putative,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016430001~ ATP binding protein%2C putative~ unknown_gene~ complete;original_location=complement(join(3115359..3115398%2C3115208..3115277%2C3114881..3115108%2C3114117..3114298%2C3113841..3114015%2C3113504..3113715%2C3112889..3113014%2C3112704..3112798%2C3112308..3112484));owner=coffea | |
| 22170 chr1 manual_curation exon 34138707 34139161 . + . Parent=GSCOCT00016430001 | |
| 22171 chr1 manual_curation exon 34138393 34138487 . + . Parent=GSCOCT00016430001 | |
| 22172 chr1 manual_curation exon 34138177 34138302 . + . Parent=GSCOCT00016430001 | |
| 22173 chr1 manual_curation exon 34137476 34137687 . + . Parent=GSCOCT00016430001 | |
| 22174 chr1 manual_curation exon 34137176 34137350 . + . Parent=GSCOCT00016430001 | |
| 22175 chr1 manual_curation exon 34136893 34137074 . + . Parent=GSCOCT00016430001 | |
| 22176 chr1 manual_curation exon 34136083 34136310 . + . Parent=GSCOCT00016430001 | |
| 22177 chr1 manual_curation exon 34135914 34135983 . + . Parent=GSCOCT00016430001 | |
| 22178 chr1 manual_curation exon 34135701 34135832 . + . Parent=GSCOCT00016430001 | |
| 22179 chr1 manual_curation CDS 34138707 34138883 . + 0 Parent=GSCOCT00016430001 | |
| 22180 chr1 manual_curation CDS 34138393 34138487 . + 1 Parent=GSCOCT00016430001 | |
| 22181 chr1 manual_curation CDS 34138177 34138302 . + 1 Parent=GSCOCT00016430001 | |
| 22182 chr1 manual_curation CDS 34137476 34137687 . + 2 Parent=GSCOCT00016430001 | |
| 22183 chr1 manual_curation CDS 34137176 34137350 . + 1 Parent=GSCOCT00016430001 | |
| 22184 chr1 manual_curation CDS 34136893 34137074 . + 2 Parent=GSCOCT00016430001 | |
| 22185 chr1 manual_curation CDS 34136083 34136310 . + 2 Parent=GSCOCT00016430001 | |
| 22186 chr1 manual_curation CDS 34135914 34135983 . + 1 Parent=GSCOCT00016430001 | |
| 22187 chr1 manual_curation CDS 34135793 34135832 . + 0 Parent=GSCOCT00016430001 | |
| 22188 chr1 manual_curation gene 34139591 34142874 . - . ID=GSCOCG00016429001;Name=Cc01_g16540 | |
| 22189 chr1 manual_curation mRNA 34139591 34142874 . - . ID=GSCOCT00016429001;Parent=GSCOCG00016429001;Name=Cc01_g16540 | |
| 22190 chr1 manual_curation polypeptide 34140010 34142281 . - . ID=GSCOCP00016429001;Dbxref=InterPro:IPR020602,PFAM:PF01227,SwissProt:Q2JPT8,SwissProt:Q3ATN0,SwissProt:Q94465,TAIR:AT3G07270.1,TrEMBL:B9IBE3,TrEMBL:B9SYL5,TrEMBL:G7L058;Derives_from=GSCOCT00016429001;Name=Cc01_g16540;Ontology_term=CC_evidence_code:ISS,CC_EC_number:3.5.4.16,PRODUCT:Putative GTP cyclohydrolase 1,CC_functional_completeness:complete,CC_gene:gchA,CC_gene:folE;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016429001~ Putative GTP cyclohydrolase 1~ gchA~ complete;original_location=join(3108910..3109129%2C3109923..3111077%2C3111135..3111181);owner=coffea | |
| 22191 chr1 manual_curation exon 34142062 34142874 . - . Parent=GSCOCT00016429001 | |
| 22192 chr1 manual_curation exon 34140114 34141268 . - . Parent=GSCOCT00016429001 | |
| 22193 chr1 manual_curation exon 34139591 34140056 . - . Parent=GSCOCT00016429001 | |
| 22194 chr1 manual_curation CDS 34142062 34142281 . - 0 Parent=GSCOCT00016429001 | |
| 22195 chr1 manual_curation CDS 34140114 34141268 . - 1 Parent=GSCOCT00016429001 | |
| 22196 chr1 manual_curation CDS 34140010 34140056 . - 1 Parent=GSCOCT00016429001 | |
| 22197 chr1 manual_curation gene 34145169 34146445 . + . ID=GSCOCG00016428001;Name=Cc01_g16550 | |
| 22198 chr1 manual_curation mRNA 34145169 34146445 . + . ID=GSCOCT00016428001;Parent=GSCOCG00016428001;Name=Cc01_g16550 | |
| 22199 chr1 manual_curation polypeptide 34145169 34146106 . + . ID=GSCOCP00016428001;Derives_from=GSCOCT00016428001;Name=Cc01_g16550;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016428001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(3105736..3106022%2C3105278..3105435%2C3105085..3105131));owner=coffea | |
| 22200 chr1 manual_curation exon 34146060 34146445 . + . Parent=GSCOCT00016428001 | |
| 22201 chr1 manual_curation exon 34145756 34145913 . + . Parent=GSCOCT00016428001 | |
| 22202 chr1 manual_curation exon 34145169 34145455 . + . Parent=GSCOCT00016428001 | |
| 22203 chr1 manual_curation CDS 34146060 34146106 . + 1 Parent=GSCOCT00016428001 | |
| 22204 chr1 manual_curation CDS 34145756 34145913 . + 2 Parent=GSCOCT00016428001 | |
| 22205 chr1 manual_curation CDS 34145169 34145455 . + 0 Parent=GSCOCT00016428001 | |
| 22206 chr1 manual_curation gene 34146511 34151243 . - . ID=GSCOCG00016427001;Name=Cc01_g16560 | |
| 22207 chr1 manual_curation mRNA 34146511 34151243 . - . ID=GSCOCT00016427001;Parent=GSCOCG00016427001;Name=Cc01_g16560 | |
| 22208 chr1 manual_curation polypeptide 34146996 34151117 . - . ID=GSCOCP00016427001;Dbxref=GENE3D:G3DSA:1.10.472.10,InterPro:IPR006670,InterPro:IPR006671,InterPro:IPR011028,InterPro:IPR013763,InterPro:IPR015429,PANTHER:PTHR10026,PFAM:PF00134,SMART:SM00385,SUPERFAMILY:SSF47954,SwissProt:P93411,SwissProt:Q9FJK6,SwissProt:Q9FJK7,TAIR:AT4G19600.1,TAIR:AT5G48630.2,TAIR:AT5G48640.1,TrEMBL:D7UE56,TrEMBL:I1KZ28,TrEMBL:I1N1Z8;Derives_from=GSCOCT00016427001;Name=Cc01_g16560;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Cyclin-C1-2,CC_functional_completeness:complete,CC_gene:CYCC1-2,CC_gene:CYCC1-1,CC_gene:Os09g0504400;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016427001~ Cyclin-C1-2~ CYCC1-2~ complete;original_location=join(3100074..3100105%2C3100227..3100333%2C3100669..3100708%2C3101026..3101070%2C3101389..3101507%2C3101645..3101759%2C3102678..3102722%2C3103316..3103463%2C3104097..3104195);owner=coffea | |
| 22209 chr1 manual_curation exon 34151086 34151243 . - . Parent=GSCOCT00016427001 | |
| 22210 chr1 manual_curation exon 34150858 34150964 . - . Parent=GSCOCT00016427001 | |
| 22211 chr1 manual_curation exon 34150483 34150522 . - . Parent=GSCOCT00016427001 | |
| 22212 chr1 manual_curation exon 34150121 34150165 . - . Parent=GSCOCT00016427001 | |
| 22213 chr1 manual_curation exon 34149684 34149802 . - . Parent=GSCOCT00016427001 | |
| 22214 chr1 manual_curation exon 34149432 34149546 . - . Parent=GSCOCT00016427001 | |
| 22215 chr1 manual_curation exon 34148469 34148513 . - . Parent=GSCOCT00016427001 | |
| 22216 chr1 manual_curation exon 34147728 34147875 . - . Parent=GSCOCT00016427001 | |
| 22217 chr1 manual_curation exon 34146511 34147094 . - . Parent=GSCOCT00016427001 | |
| 22218 chr1 manual_curation CDS 34151086 34151117 . - 0 Parent=GSCOCT00016427001 | |
| 22219 chr1 manual_curation CDS 34150858 34150964 . - 2 Parent=GSCOCT00016427001 | |
| 22220 chr1 manual_curation CDS 34150483 34150522 . - 1 Parent=GSCOCT00016427001 | |
| 22221 chr1 manual_curation CDS 34150121 34150165 . - 2 Parent=GSCOCT00016427001 | |
| 22222 chr1 manual_curation CDS 34149684 34149802 . - 2 Parent=GSCOCT00016427001 | |
| 22223 chr1 manual_curation CDS 34149432 34149546 . - 1 Parent=GSCOCT00016427001 | |
| 22224 chr1 manual_curation CDS 34148469 34148513 . - 2 Parent=GSCOCT00016427001 | |
| 22225 chr1 manual_curation CDS 34147728 34147875 . - 2 Parent=GSCOCT00016427001 | |
| 22226 chr1 manual_curation CDS 34146996 34147094 . - 0 Parent=GSCOCT00016427001 | |
| 22227 chr1 manual_curation gene 34155452 34156774 . - . ID=GSCOCG00016426001;Name=Cc01_g16570 | |
| 22228 chr1 manual_curation mRNA 34155452 34156774 . - . ID=GSCOCT00016426001;Parent=GSCOCG00016426001;Name=Cc01_g16570 | |
| 22229 chr1 manual_curation polypeptide 34155866 34156638 . - . ID=GSCOCP00016426001;Dbxref=GENE3D:G3DSA:1.10.287.110,InterPro:IPR001623,InterPro:IPR015609,InterPro:IPR018253,PANTHER:PTHR11821,PFAM:PF00226,PROFILE:PS50076,PROSITE:PS00636,SMART:SM00271,SUPERFAMILY:SSF46565,SwissProt:Q5L6F7,SwissProt:Q9SDN0,SwissProt:Q9Z9E9,TAIR:AT3G13310.1,TAIR:AT3G47940.1,TAIR:AT4G13830.2,TrEMBL:B9RWC0,TrEMBL:B9SYM0,TrEMBL:Q0GA60;Derives_from=GSCOCT00016426001;Name=Cc01_g16570;Ontology_term=CC_evidence_code:ISS,GO:0031072,CC_EC_number:missing_EC_number,PRODUCT:Putative Chaperone protein dnaJ 20%2C chloroplastic,CC_functional_completeness:complete,CC_gene:ATJ20,CC_gene:dnaJ;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016426001~ Putative Chaperone protein dnaJ 20%2C chloroplastic~ ATJ20~ complete;original_location=join(3094553..3094999%2C3095137..3095325);owner=coffea | |
| 22230 chr1 manual_curation exon 34156192 34156774 . - . Parent=GSCOCT00016426001 | |
| 22231 chr1 manual_curation exon 34155452 34156054 . - . Parent=GSCOCT00016426001 | |
| 22232 chr1 manual_curation CDS 34156192 34156638 . - 0 Parent=GSCOCT00016426001 | |
| 22233 chr1 manual_curation CDS 34155866 34156054 . - 0 Parent=GSCOCT00016426001 | |
| 22234 chr1 manual_curation gene 34173209 34173942 . + . ID=GSCOCG00016423001;Name=Cc01_g16580 | |
| 22235 chr1 manual_curation mRNA 34173209 34173942 . + . ID=GSCOCT00016423001;Parent=GSCOCG00016423001;Name=Cc01_g16580 | |
| 22236 chr1 manual_curation polypeptide 34173375 34173942 . + . ID=GSCOCP00016423001;Dbxref=InterPro:IPR000133,PANTHER:PTHR10585,TAIR:AT2G21190.1,TAIR:AT3G25160.1,TAIR:AT4G38790.1,TrEMBL:B9GQM3,TrEMBL:F2DID5,TrEMBL:F6HCQ4;Derives_from=GSCOCT00016423001;Name=Cc01_g16580;Ontology_term=CC_evidence_code:ISS,GO:0006621,GO:0016021,GO:0046923,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016423001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(3077588..3077816%2C3077249..3077328));owner=coffea | |
| 22237 chr1 manual_curation exon 34173863 34173942 . + . Parent=GSCOCT00016423001 | |
| 22238 chr1 manual_curation exon 34173209 34173603 . + . Parent=GSCOCT00016423001 | |
| 22239 chr1 manual_curation CDS 34173863 34173942 . + 1 Parent=GSCOCT00016423001 | |
| 22240 chr1 manual_curation CDS 34173375 34173603 . + 0 Parent=GSCOCT00016423001 | |
| 22241 chr1 manual_curation gene 34175830 34176954 . + . ID=GSCOCG00016422001;Name=Cc01_g16590 | |
| 22242 chr1 manual_curation mRNA 34175830 34176954 . + . ID=GSCOCT00016422001;Parent=GSCOCG00016422001;Name=Cc01_g16590 | |
| 22243 chr1 manual_curation polypeptide 34175830 34176954 . + . ID=GSCOCP00016422001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,SwissProt:Q43716,SwissProt:Q9FN26,SwissProt:Q9FN28,TAIR:AT4G27570.1,TAIR:AT5G53990.1,TAIR:AT5G54010.1,TrEMBL:A4GRR9,TrEMBL:A4GRS3,TrEMBL:A4GRU4;Derives_from=GSCOCT00016422001;Name=Cc01_g16590;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:Anthocyanidin 3-O-glucosyltransferase,CC_functional_completeness:fragment,CC_gene:RT,CC_gene:UGT79B6,CC_gene:UGT79B9;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016422001~ Anthocyanidin 3-O-glucosyltransferase~ RT~ fragment;original_location=complement(3074237..3075361);owner=coffea | |
| 22244 chr1 manual_curation exon 34175830 34176954 . + . Parent=GSCOCT00016422001 | |
| 22245 chr1 manual_curation CDS 34175830 34176954 . + 0 Parent=GSCOCT00016422001 | |
| 22246 chr1 manual_curation gene 34177046 34179835 . - . ID=GSCOCG00016421001;Name=Cc01_g16600 | |
| 22247 chr1 manual_curation mRNA 34177046 34179835 . - . ID=GSCOCT00016421001;Parent=GSCOCG00016421001;Name=Cc01_g16600 | |
| 22248 chr1 manual_curation polypeptide 34177936 34179066 . - . ID=GSCOCP00016421001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,SwissProt:Q43716,SwissProt:Q9FN26,SwissProt:Q9FN28,TAIR:AT3G29630.1,TAIR:AT5G53990.1,TAIR:AT5G54010.1,TrEMBL:A4GRR9,TrEMBL:A4GRS4,TrEMBL:A4GRT4;Derives_from=GSCOCT00016421001;Name=Cc01_g16600;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:Anthocyanidin 3-O-glucosyltransferase,CC_functional_completeness:fragment,CC_gene:RT,CC_gene:UGT79B6,CC_gene:UGT79B9;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016421001~ Anthocyanidin 3-O-glucosyltransferase~ RT~ fragment;original_location=3072125..3073255;owner=coffea | |
| 22249 chr1 manual_curation exon 34177046 34179835 . - . Parent=GSCOCT00016421001 | |
| 22250 chr1 manual_curation CDS 34177936 34179066 . - 0 Parent=GSCOCT00016421001 | |
| 22251 chr1 manual_curation gene 34190758 34193168 . + . ID=GSCOCG00016420001;Name=Cc01_g16610 | |
| 22252 chr1 manual_curation mRNA 34190758 34193168 . + . ID=GSCOCT00016420001;Parent=GSCOCG00016420001;Name=Cc01_g16610 | |
| 22253 chr1 manual_curation polypeptide 34190965 34193168 . + . ID=GSCOCP00016420001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,SUPERFAMILY:SSF48264,SwissProt:O49394,SwissProt:Q43068,SwissProt:Q9SZ46,TAIR:AT3G25180.1,TAIR:AT4G31940.1,TAIR:AT4G31970.1,TrEMBL:A5BQG5,TrEMBL:F6HDC2,TrEMBL:F6HXU1;Derives_from=GSCOCT00016420001;Name=Cc01_g16610;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.21,PRODUCT:Putative Cytochrome P450 82A1 (Fragment),CC_functional_completeness:complete,CC_gene:CYP82A1,CC_gene:CYP82C4,CC_gene:CYP82C2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016420001~ Putative Cytochrome P450 82A1 (Fragment)~ CYP82A1~ complete;original_location=complement(join(3059270..3060226%2C3058023..3058472));owner=coffea | |
| 22254 chr1 manual_curation exon 34192719 34193168 . + . Parent=GSCOCT00016420001 | |
| 22255 chr1 manual_curation exon 34190758 34191921 . + . Parent=GSCOCT00016420001 | |
| 22256 chr1 manual_curation CDS 34192719 34193168 . + 0 Parent=GSCOCT00016420001 | |
| 22257 chr1 manual_curation CDS 34190965 34191921 . + 0 Parent=GSCOCT00016420001 | |
| 22258 chr1 manual_curation gene 34194181 34197847 . + . ID=GSCOCG00016419001;Name=Cc01_g16620 | |
| 22259 chr1 manual_curation mRNA 34194181 34197847 . + . ID=GSCOCT00016419001;Parent=GSCOCG00016419001;Name=Cc01_g16620 | |
| 22260 chr1 manual_curation polypeptide 34194352 34197611 . + . ID=GSCOCP00016419001;Dbxref=InterPro:IPR000133,PANTHER:PTHR10585,PFAM:PF00810,PRINTS:PR00660,SwissProt:O94270,SwissProt:P48583,SwissProt:Q86JE5,TAIR:AT1G75760.1,TAIR:AT2G21190.1,TAIR:AT3G25160.1,TrEMBL:B9GQM3,TrEMBL:B9SYM6,TrEMBL:F6HCQ4;Derives_from=GSCOCT00016419001;Name=Cc01_g16620;Ontology_term=CC_evidence_code:ISS,GO:0006621,GO:0016021,GO:0046923,CC_EC_number:missing_EC_number,PRODUCT:Putative ER lumen protein retaining receptor,CC_functional_completeness:complete,CC_gene:kdelr,CC_gene:erd-2,CC_gene:erd2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016419001~ Putative ER lumen protein retaining receptor~ kdelr~ complete;original_location=complement(join(3056611..3056839%2C3055552..3055751%2C3054660..3054800%2C3054502..3054582%2C3053727..3053854%2C3053580..3053619));owner=coffea | |
| 22261 chr1 manual_curation exon 34197572 34197847 . + . Parent=GSCOCT00016419001 | |
| 22262 chr1 manual_curation exon 34197337 34197464 . + . Parent=GSCOCT00016419001 | |
| 22263 chr1 manual_curation exon 34196609 34196689 . + . Parent=GSCOCT00016419001 | |
| 22264 chr1 manual_curation exon 34196391 34196531 . + . Parent=GSCOCT00016419001 | |
| 22265 chr1 manual_curation exon 34195440 34195639 . + . Parent=GSCOCT00016419001 | |
| 22266 chr1 manual_curation exon 34194181 34194580 . + . Parent=GSCOCT00016419001 | |
| 22267 chr1 manual_curation CDS 34197572 34197611 . + 2 Parent=GSCOCT00016419001 | |
| 22268 chr1 manual_curation CDS 34197337 34197464 . + 0 Parent=GSCOCT00016419001 | |
| 22269 chr1 manual_curation CDS 34196609 34196689 . + 0 Parent=GSCOCT00016419001 | |
| 22270 chr1 manual_curation CDS 34196391 34196531 . + 0 Parent=GSCOCT00016419001 | |
| 22271 chr1 manual_curation CDS 34195440 34195639 . + 1 Parent=GSCOCT00016419001 | |
| 22272 chr1 manual_curation CDS 34194352 34194580 . + 0 Parent=GSCOCT00016419001 | |
| 22273 chr1 manual_curation gene 34199243 34202294 . + . ID=GSCOCG00016417001;Name=Cc01_g16630 | |
| 22274 chr1 manual_curation mRNA 34199243 34202294 . + . ID=GSCOCT00016417001;Parent=GSCOCG00016417001;Name=Cc01_g16630 | |
| 22275 chr1 manual_curation polypeptide 34199425 34202190 . + . ID=GSCOCP00016417001;Dbxref=InterPro:IPR000133,PANTHER:PTHR10585,PFAM:PF00810,PRINTS:PR00660,SwissProt:P33948,SwissProt:Q76NM1,SwissProt:Q86JE5,TAIR:AT1G19970.1,TAIR:AT1G75760.1,TAIR:AT3G25160.1,TrEMBL:B9GQM3,TrEMBL:B9SYM6,TrEMBL:F6HCQ4;Derives_from=GSCOCT00016417001;Name=Cc01_g16630;Ontology_term=CC_evidence_code:ISS,GO:0006621,GO:0016021,GO:0046923,CC_EC_number:missing_EC_number,PRODUCT:Putative ER lumen protein retaining receptor,CC_functional_completeness:modules,CC_gene:ERD2,CC_gene:kdelr;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016417001~ Putative ER lumen protein retaining receptor~ ERD2~ modules;original_location=complement(join(3051541..3051766%2C3050480..3050679%2C3050027..3050167%2C3049860..3049940%2C3049152..3049279%2C3049001..3049049));owner=coffea | |
| 22276 chr1 manual_curation exon 34202142 34202294 . + . Parent=GSCOCT00016417001 | |
| 22277 chr1 manual_curation exon 34201912 34202039 . + . Parent=GSCOCT00016417001 | |
| 22278 chr1 manual_curation exon 34201251 34201331 . + . Parent=GSCOCT00016417001 | |
| 22279 chr1 manual_curation exon 34201024 34201164 . + . Parent=GSCOCT00016417001 | |
| 22280 chr1 manual_curation exon 34200512 34200711 . + . Parent=GSCOCT00016417001 | |
| 22281 chr1 manual_curation exon 34199243 34199650 . + . Parent=GSCOCT00016417001 | |
| 22282 chr1 manual_curation CDS 34202142 34202190 . + 2 Parent=GSCOCT00016417001 | |
| 22283 chr1 manual_curation CDS 34201912 34202039 . + 0 Parent=GSCOCT00016417001 | |
| 22284 chr1 manual_curation CDS 34201251 34201331 . + 0 Parent=GSCOCT00016417001 | |
| 22285 chr1 manual_curation CDS 34201024 34201164 . + 0 Parent=GSCOCT00016417001 | |
| 22286 chr1 manual_curation CDS 34200512 34200711 . + 1 Parent=GSCOCT00016417001 | |
| 22287 chr1 manual_curation CDS 34199425 34199650 . + 0 Parent=GSCOCT00016417001 | |
| 22288 chr1 manual_curation gene 34210449 34213620 . + . ID=GSCOCG00016416001;Name=Cc01_g16640 | |
| 22289 chr1 manual_curation mRNA 34210449 34213620 . + . ID=GSCOCT00016416001;Parent=GSCOCG00016416001;Name=Cc01_g16640 | |
| 22290 chr1 manual_curation polypeptide 34210449 34213620 . + . ID=GSCOCP00016416001;Dbxref=InterPro:IPR012463,PFAM:PF07897,SwissProt:B1B5D3,SwissProt:B1B5D4,SwissProt:Q94F39,TAIR:AT1G69260.1,TAIR:AT3G07250.1,TAIR:AT3G29575.1,TrEMBL:A5AEH4,TrEMBL:B9SYM8,TrEMBL:F6HCQ5;Derives_from=GSCOCT00016416001;Name=Cc01_g16640;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:AFP3,CC_gene:AFP-A1,CC_gene:AFP-B1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016416001~ Putative uncharacterized protein~ AFP3~ fragment;original_location=complement(join(3039734..3040742%2C3037571..3038139));owner=coffea | |
| 22291 chr1 manual_curation exon 34213052 34213620 . + . Parent=GSCOCT00016416001 | |
| 22292 chr1 manual_curation exon 34210449 34211457 . + . Parent=GSCOCT00016416001 | |
| 22293 chr1 manual_curation CDS 34213052 34213620 . + 1 Parent=GSCOCT00016416001 | |
| 22294 chr1 manual_curation CDS 34210449 34211457 . + 0 Parent=GSCOCT00016416001 | |
| 22295 chr1 manual_curation gene 34214658 34215400 . - . ID=GSCOCG00016415001;Name=Cc01_g16650 | |
| 22296 chr1 manual_curation mRNA 34214658 34215400 . - . ID=GSCOCT00016415001;Parent=GSCOCG00016415001;Name=Cc01_g16650 | |
| 22297 chr1 manual_curation polypeptide 34215033 34215400 . - . ID=GSCOCP00016415001;Dbxref=TrEMBL:B9T3B3,TrEMBL:I1KZ32,TrEMBL:I1KZ33;Derives_from=GSCOCT00016415001;Name=Cc01_g16650;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:RNA binding protein%2C putative,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016415001~ RNA binding protein%2C putative~ unknown_gene~ fragment;original_location=join(3035791..3035827%2C3035875..3036158);owner=coffea | |
| 22298 chr1 manual_curation exon 34215364 34215400 . - . Parent=GSCOCT00016415001 | |
| 22299 chr1 manual_curation exon 34214658 34215316 . - . Parent=GSCOCT00016415001 | |
| 22300 chr1 manual_curation CDS 34215364 34215400 . - 0 Parent=GSCOCT00016415001 | |
| 22301 chr1 manual_curation CDS 34215033 34215316 . - 1 Parent=GSCOCT00016415001 | |
| 22302 chr1 manual_curation gene 34215585 34219426 . - . ID=GSCOCG00016414001;Name=Cc01_g16660 | |
| 22303 chr1 manual_curation mRNA 34215585 34219426 . - . ID=GSCOCT00016414001;Parent=GSCOCG00016414001;Name=Cc01_g16660 | |
| 22304 chr1 manual_curation polypeptide 34215585 34218953 . - . ID=GSCOCP00016414001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR002075,InterPro:IPR012677,InterPro:IPR018222,PFAM:PF00076,PFAM:PF02136,PROFILE:PS50102,PROFILE:PS50177,SMART:SM00360,SwissProt:O94260,SwissProt:P97855,SwissProt:Q13283,TAIR:AT3G25150.2,TAIR:AT5G48650.1,TAIR:AT5G60980.2,TrEMBL:A5AXU8,TrEMBL:B9T3B3,TrEMBL:F6HCQ3;Derives_from=GSCOCT00016414001;Name=Cc01_g16660;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,GO:0005622,GO:0006810,CC_EC_number:missing_EC_number,PRODUCT:Putative G3BP-like protein,CC_functional_completeness:complete,CC_gene:nxt3,CC_gene:G3bp1,CC_gene:G3BP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016414001~ Putative G3BP-like protein~ nxt3~ complete;original_location=join(3032238..3032288%2C3032403..3032540%2C3033006..3033294%2C3033373..3033605%2C3033855..3033972%2C3034120..3034241%2C3034316..3034381%2C3035481..3035606);owner=coffea | |
| 22305 chr1 manual_curation exon 34219115 34219426 . - . Parent=GSCOCT00016414001 | |
| 22306 chr1 manual_curation exon 34218903 34218974 . - . Parent=GSCOCT00016414001 | |
| 22307 chr1 manual_curation exon 34218651 34218788 . - . Parent=GSCOCT00016414001 | |
| 22308 chr1 manual_curation exon 34217897 34218185 . - . Parent=GSCOCT00016414001 | |
| 22309 chr1 manual_curation exon 34217586 34217818 . - . Parent=GSCOCT00016414001 | |
| 22310 chr1 manual_curation exon 34217219 34217336 . - . Parent=GSCOCT00016414001 | |
| 22311 chr1 manual_curation exon 34216950 34217071 . - . Parent=GSCOCT00016414001 | |
| 22312 chr1 manual_curation exon 34216810 34216875 . - . Parent=GSCOCT00016414001 | |
| 22313 chr1 manual_curation exon 34215585 34215710 . - . Parent=GSCOCT00016414001 | |
| 22314 chr1 manual_curation CDS 34218903 34218953 . - 0 Parent=GSCOCT00016414001 | |
| 22315 chr1 manual_curation CDS 34218651 34218788 . - 0 Parent=GSCOCT00016414001 | |
| 22316 chr1 manual_curation CDS 34217897 34218185 . - 0 Parent=GSCOCT00016414001 | |
| 22317 chr1 manual_curation CDS 34217586 34217818 . - 1 Parent=GSCOCT00016414001 | |
| 22318 chr1 manual_curation CDS 34217219 34217336 . - 0 Parent=GSCOCT00016414001 | |
| 22319 chr1 manual_curation CDS 34216950 34217071 . - 1 Parent=GSCOCT00016414001 | |
| 22320 chr1 manual_curation CDS 34216810 34216875 . - 0 Parent=GSCOCT00016414001 | |
| 22321 chr1 manual_curation CDS 34215585 34215710 . - 0 Parent=GSCOCT00016414001 | |
| 22322 chr1 manual_curation gene 34224834 34228154 . - . ID=GSCOCG00016413001;Name=Cc01_g16670 | |
| 22323 chr1 manual_curation mRNA 34224834 34228154 . - . ID=GSCOCT00016413001;Parent=GSCOCG00016413001;Name=Cc01_g16670 | |
| 22324 chr1 manual_curation polypeptide 34225279 34227676 . - . ID=GSCOCP00016413001;Dbxref=InterPro:IPR002495,PFAM:PF01501,SwissProt:Q9FWA4,SwissProt:Q9LE59,SwissProt:Q9LSG3,TAIR:AT3G02350.1,TAIR:AT3G25140.1,TAIR:AT3G61130.1,TrEMBL:A9P857,TrEMBL:B9GQM0,TrEMBL:B9T3B4;Derives_from=GSCOCT00016413001;Name=Cc01_g16670;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Galacturonosyltransferase 8,CC_functional_completeness:complete,CC_gene:GAUT8,CC_gene:GAUT9,CC_gene:GAUT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016413001~ Galacturonosyltransferase 8~ GAUT8~ complete;original_location=join(3023515..3023694%2C3024049..3025293%2C3025637..3025912);owner=coffea | |
| 22325 chr1 manual_curation exon 34227497 34228154 . - . Parent=GSCOCT00016413001 | |
| 22326 chr1 manual_curation exon 34225898 34227142 . - . Parent=GSCOCT00016413001 | |
| 22327 chr1 manual_curation exon 34224834 34225554 . - . Parent=GSCOCT00016413001 | |
| 22328 chr1 manual_curation CDS 34227497 34227676 . - 0 Parent=GSCOCT00016413001 | |
| 22329 chr1 manual_curation CDS 34225898 34227142 . - 0 Parent=GSCOCT00016413001 | |
| 22330 chr1 manual_curation CDS 34225279 34225554 . - 0 Parent=GSCOCT00016413001 | |
| 22331 chr1 manual_curation gene 34229061 34230630 . - . ID=GSCOCG00016412001;Name=Cc01_g16680 | |
| 22332 chr1 manual_curation mRNA 34229061 34230630 . - . ID=GSCOCT00016412001;Parent=GSCOCG00016412001;Name=Cc01_g16680 | |
| 22333 chr1 manual_curation polypeptide 34229176 34230582 . - . ID=GSCOCP00016412001;Dbxref=TAIR:AT3G25130.1,TrEMBL:B9GQL9,TrEMBL:B9T3B6,TrEMBL:F6HCR6;Derives_from=GSCOCT00016412001;Name=Cc01_g16680;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Predicted protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016412001~ Putative Predicted protein~ unknown_gene~ complete;original_location=3020609..3022015;owner=coffea | |
| 22334 chr1 manual_curation exon 34229061 34230630 . - . Parent=GSCOCT00016412001 | |
| 22335 chr1 manual_curation CDS 34229176 34230582 . - 0 Parent=GSCOCT00016412001 | |
| 22336 chr1 manual_curation gene 34240949 34246292 . + . ID=GSCOCG00016410001;Name=Cc01_g16690 | |
| 22337 chr1 manual_curation mRNA 34240949 34246292 . + . ID=GSCOCT00016410001;Parent=GSCOCG00016410001;Name=Cc01_g16690 | |
| 22338 chr1 manual_curation polypeptide 34242692 34246238 . + . ID=GSCOCP00016410001;Dbxref=InterPro:IPR001471,InterPro:IPR016177,PFAM:PF00847,SMART:SM00380,SUPERFAMILY:SSF54171,SwissProt:Q56XP9,TAIR:AT4G13040.3,TrEMBL:A5BWR3,TrEMBL:B6U166,TrEMBL:C0P9B0;Derives_from=GSCOCT00016410001;Name=Cc01_g16690;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:At4g13040;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016410001~ Putative uncharacterized protein~ At4g13040~ complete;original_location=complement(join(3008463..3008499%2C3008126..3008259%2C3006988..3007072%2C3005552..3005726%2C3005194..3005315%2C3004953..3005092));owner=coffea | |
| 22339 chr1 manual_curation exon 34240949 34240990 . + . Parent=GSCOCT00016410001 | |
| 22340 chr1 manual_curation exon 34246099 34246292 . + . Parent=GSCOCT00016410001 | |
| 22341 chr1 manual_curation exon 34245876 34245997 . + . Parent=GSCOCT00016410001 | |
| 22342 chr1 manual_curation exon 34245465 34245639 . + . Parent=GSCOCT00016410001 | |
| 22343 chr1 manual_curation exon 34244119 34244203 . + . Parent=GSCOCT00016410001 | |
| 22344 chr1 manual_curation exon 34242932 34243065 . + . Parent=GSCOCT00016410001 | |
| 22345 chr1 manual_curation exon 34242675 34242728 . + . Parent=GSCOCT00016410001 | |
| 22346 chr1 manual_curation CDS 34246099 34246238 . + 1 Parent=GSCOCT00016410001 | |
| 22347 chr1 manual_curation CDS 34245876 34245997 . + 2 Parent=GSCOCT00016410001 | |
| 22348 chr1 manual_curation CDS 34245465 34245639 . + 1 Parent=GSCOCT00016410001 | |
| 22349 chr1 manual_curation CDS 34244119 34244203 . + 0 Parent=GSCOCT00016410001 | |
| 22350 chr1 manual_curation CDS 34242932 34243065 . + 1 Parent=GSCOCT00016410001 | |
| 22351 chr1 manual_curation CDS 34242692 34242728 . + 0 Parent=GSCOCT00016410001 | |
| 22352 chr1 manual_curation gene 34247509 34249508 . + . ID=GSCOCG00016409001;Name=Cc01_g16700 | |
| 22353 chr1 manual_curation mRNA 34247509 34249508 . + . ID=GSCOCT00016409001;Parent=GSCOCG00016409001;Name=Cc01_g16700 | |
| 22354 chr1 manual_curation polypeptide 34247576 34249238 . + . ID=GSCOCP00016409001;Dbxref=InterPro:IPR003397,PFAM:PF02466,TAIR:AT3G25120.1,TrEMBL:B9GQL5,TrEMBL:B9T3B8,TrEMBL:D7TFY7;Derives_from=GSCOCT00016409001;Name=Cc01_g16700;Ontology_term=CC_evidence_code:ISS,GO:0005743,GO:0008565,GO:0015031,CC_EC_number:missing_EC_number,PRODUCT:Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016409001~ Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein~ unknown_gene~ complete;original_location=complement(join(3003495..3003615%2C3003209..3003322%2C3002748..3002852%2C3001953..3002215));owner=coffea | |
| 22355 chr1 manual_curation exon 34248976 34249508 . + . Parent=GSCOCT00016409001 | |
| 22356 chr1 manual_curation exon 34248339 34248443 . + . Parent=GSCOCT00016409001 | |
| 22357 chr1 manual_curation exon 34247869 34247982 . + . Parent=GSCOCT00016409001 | |
| 22358 chr1 manual_curation exon 34247509 34247696 . + . Parent=GSCOCT00016409001 | |
| 22359 chr1 manual_curation CDS 34248976 34249238 . + 1 Parent=GSCOCT00016409001 | |
| 22360 chr1 manual_curation CDS 34248339 34248443 . + 1 Parent=GSCOCT00016409001 | |
| 22361 chr1 manual_curation CDS 34247869 34247982 . + 1 Parent=GSCOCT00016409001 | |
| 22362 chr1 manual_curation CDS 34247576 34247696 . + 0 Parent=GSCOCT00016409001 | |
| 22363 chr1 manual_curation gene 34249983 34254001 . - . ID=GSCOCG00016408001;Name=Cc01_g16710 | |
| 22364 chr1 manual_curation mRNA 34249983 34254001 . - . ID=GSCOCT00016408001;Parent=GSCOCG00016408001;Name=Cc01_g16710 | |
| 22365 chr1 manual_curation polypeptide 34250237 34253396 . - . ID=GSCOCP00016408001;Dbxref=InterPro:IPR000253,InterPro:IPR008984,PFAM:PF00498,PROFILE:PS50006,SMART:SM00240,SUPERFAMILY:SSF49879,SwissProt:O14270,SwissProt:P39521,TAIR:AT3G07220.1,TAIR:AT3G07260.1,TrEMBL:B9T3B9,TrEMBL:D7L6I5,TrEMBL:I1KZ40;Derives_from=GSCOCT00016408001;Name=Cc01_g16710;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:SMAD/FHA domain-containing protein ,CC_functional_completeness:complete,CC_gene:fhl1,CC_gene:FHL1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016408001~ SMAD/FHA domain-containing protein ~ fhl1~ complete;original_location=join(2997795..2998470%2C2999260..2999417%2C3000745..3000954);owner=coffea | |
| 22366 chr1 manual_curation exon 34252721 34254001 . - . Parent=GSCOCT00016408001 | |
| 22367 chr1 manual_curation exon 34251774 34251931 . - . Parent=GSCOCT00016408001 | |
| 22368 chr1 manual_curation exon 34249983 34250446 . - . Parent=GSCOCT00016408001 | |
| 22369 chr1 manual_curation CDS 34252721 34253396 . - 0 Parent=GSCOCT00016408001 | |
| 22370 chr1 manual_curation CDS 34251774 34251931 . - 1 Parent=GSCOCT00016408001 | |
| 22371 chr1 manual_curation CDS 34250237 34250446 . - 0 Parent=GSCOCT00016408001 | |
| 22372 chr1 manual_curation gene 34258783 34262521 . + . ID=GSCOCG00016407001;Name=Cc01_g16720 | |
| 22373 chr1 manual_curation mRNA 34258783 34262521 . + . ID=GSCOCT00016407001;Parent=GSCOCG00016407001;Name=Cc01_g16720 | |
| 22374 chr1 manual_curation polypeptide 34259201 34262521 . + . ID=GSCOCP00016407001;Dbxref=InterPro:IPR009003,SUPERFAMILY:SSF50494,TAIR:AT3G07210.1,TrEMBL:B9GQL2,TrEMBL:D7T589,TrEMBL:I1N274;Derives_from=GSCOCT00016407001;Name=Cc01_g16720;Ontology_term=CC_evidence_code:ISS,GO:0003824,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B Has 97 Blast hits to 85 proteins in 31 species,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016407001~ unknown protein%3B Has 97 Blast hits to 85 proteins in 31 species: Archae - 0%3B Bacteria - 14%3B Metazoa - 7%3B Fungi - 19%3B Plants - 37%3B Viruses - 0%3B Other Eukaryotes - 20 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(2991749..2991990%2C2988998..2990062%2C2988670..2988841));owner=coffea | |
| 22375 chr1 manual_curation exon 34262350 34262521 . + . Parent=GSCOCT00016407001 | |
| 22376 chr1 manual_curation exon 34261129 34262193 . + . Parent=GSCOCT00016407001 | |
| 22377 chr1 manual_curation exon 34258783 34259442 . + . Parent=GSCOCT00016407001 | |
| 22378 chr1 manual_curation CDS 34262350 34262521 . + 2 Parent=GSCOCT00016407001 | |
| 22379 chr1 manual_curation CDS 34261129 34262193 . + 2 Parent=GSCOCT00016407001 | |
| 22380 chr1 manual_curation CDS 34259201 34259442 . + 0 Parent=GSCOCT00016407001 | |
| 22381 chr1 manual_curation gene 34264433 34270364 . - . ID=GSCOCG00016406001;Name=Cc01_g16730 | |
| 22382 chr1 manual_curation mRNA 34264433 34270364 . - . ID=GSCOCT00016406001;Parent=GSCOCG00016406001;Name=Cc01_g16730 | |
| 22383 chr1 manual_curation polypeptide 34264992 34270264 . - . ID=GSCOCP00016406001;Dbxref=InterPro:IPR008217,PFAM:PF01988,TAIR:AT4G27860.1,TAIR:AT4G27870.1,TAIR:AT5G24290.1,TrEMBL:A5BRX5,TrEMBL:B9MUG0,TrEMBL:B9RPK0;Derives_from=GSCOCT00016406001;Name=Cc01_g16730;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016406001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(2980927..2981230%2C2982647..2982742%2C2983053..2983481%2C2984071..2984205%2C2984941..2985153%2C2985574..2985635%2C2985741..2986199);owner=coffea | |
| 22384 chr1 manual_curation exon 34269961 34270364 . - . Parent=GSCOCT00016406001 | |
| 22385 chr1 manual_curation exon 34268449 34268544 . - . Parent=GSCOCT00016406001 | |
| 22386 chr1 manual_curation exon 34267710 34268138 . - . Parent=GSCOCT00016406001 | |
| 22387 chr1 manual_curation exon 34266986 34267120 . - . Parent=GSCOCT00016406001 | |
| 22388 chr1 manual_curation exon 34266038 34266250 . - . Parent=GSCOCT00016406001 | |
| 22389 chr1 manual_curation exon 34265556 34265617 . - . Parent=GSCOCT00016406001 | |
| 22390 chr1 manual_curation exon 34264433 34265450 . - . Parent=GSCOCT00016406001 | |
| 22391 chr1 manual_curation CDS 34269961 34270264 . - 0 Parent=GSCOCT00016406001 | |
| 22392 chr1 manual_curation CDS 34268449 34268544 . - 1 Parent=GSCOCT00016406001 | |
| 22393 chr1 manual_curation CDS 34267710 34268138 . - 1 Parent=GSCOCT00016406001 | |
| 22394 chr1 manual_curation CDS 34266986 34267120 . - 1 Parent=GSCOCT00016406001 | |
| 22395 chr1 manual_curation CDS 34266038 34266250 . - 1 Parent=GSCOCT00016406001 | |
| 22396 chr1 manual_curation CDS 34265556 34265617 . - 1 Parent=GSCOCT00016406001 | |
| 22397 chr1 manual_curation CDS 34264992 34265450 . - 0 Parent=GSCOCT00016406001 | |
| 22398 chr1 manual_curation gene 34279553 34280247 . + . ID=GSCOCG00016405001;Name=Cc01_g16740 | |
| 22399 chr1 manual_curation mRNA 34279553 34280247 . + . ID=GSCOCT00016405001;Parent=GSCOCG00016405001;Name=Cc01_g16740 | |
| 22400 chr1 manual_curation polypeptide 34279590 34280247 . + . ID=GSCOCP00016405001;Dbxref=InterPro:IPR002864,PFAM:PF01643,SwissProt:Q39513,SwissProt:Q42712,SwissProt:Q9SQI3,TAIR:AT1G08510.1,TAIR:AT3G25110.1,TAIR:AT4G13050.1,TrEMBL:D7MVG0,TrEMBL:Q42715;Derives_from=GSCOCT00016405001;Name=Cc01_g16740;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Oleoyl-acyl carrier protein thioesterase%2C chloroplastic (Fragment),CC_functional_completeness:fragment,CC_gene:FATA,CC_gene:FATB1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016405001~ Oleoyl-acyl carrier protein thioesterase%2C chloroplastic (Fragment)~ FATA~ fragment;original_location=complement(join(2971534..2971601%2C2971328..2971441%2C2970944..2971052));owner=coffea | |
| 22401 chr1 manual_curation exon 34280139 34280247 . + . Parent=GSCOCT00016405001 | |
| 22402 chr1 manual_curation exon 34279750 34279863 . + . Parent=GSCOCT00016405001 | |
| 22403 chr1 manual_curation exon 34279553 34279657 . + . Parent=GSCOCT00016405001 | |
| 22404 chr1 manual_curation CDS 34280139 34280247 . + 2 Parent=GSCOCT00016405001 | |
| 22405 chr1 manual_curation CDS 34279750 34279863 . + 2 Parent=GSCOCT00016405001 | |
| 22406 chr1 manual_curation CDS 34279590 34279657 . + 0 Parent=GSCOCT00016405001 | |
| 22407 chr1 manual_curation gene 34282178 34289686 . - . ID=GSCOCG00016404001;Name=Cc01_g16750 | |
| 22408 chr1 manual_curation mRNA 34282178 34289686 . - . ID=GSCOCT00016404001;Parent=GSCOCG00016404001;Name=Cc01_g16750 | |
| 22409 chr1 manual_curation polypeptide 34282178 34289507 . - . ID=GSCOCP00016404001;Dbxref=InterPro:IPR008217,PFAM:PF01988,TAIR:AT4G27860.1,TAIR:AT4G27870.1,TAIR:AT5G24290.1,TrEMBL:A5BRX5,TrEMBL:B9MUG0,TrEMBL:B9RPK0;Derives_from=GSCOCT00016404001;Name=Cc01_g16750;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016404001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(2961684..2961981%2C2964500..2964910%2C2965509..2965634%2C2965870..2965992%2C2966697..2966771%2C2967017..2967091%2C2967329..2967433%2C2967699..2967959%2C2968391..2968452%2C2968555..2969013);owner=coffea | |
| 22410 chr1 manual_curation exon 34289210 34289686 . - . Parent=GSCOCT00016404001 | |
| 22411 chr1 manual_curation exon 34286281 34286691 . - . Parent=GSCOCT00016404001 | |
| 22412 chr1 manual_curation exon 34285557 34285682 . - . Parent=GSCOCT00016404001 | |
| 22413 chr1 manual_curation exon 34285199 34285321 . - . Parent=GSCOCT00016404001 | |
| 22414 chr1 manual_curation exon 34284420 34284494 . - . Parent=GSCOCT00016404001 | |
| 22415 chr1 manual_curation exon 34284100 34284174 . - . Parent=GSCOCT00016404001 | |
| 22416 chr1 manual_curation exon 34283758 34283862 . - . Parent=GSCOCT00016404001 | |
| 22417 chr1 manual_curation exon 34283232 34283492 . - . Parent=GSCOCT00016404001 | |
| 22418 chr1 manual_curation exon 34282739 34282800 . - . Parent=GSCOCT00016404001 | |
| 22419 chr1 manual_curation exon 34282178 34282636 . - . Parent=GSCOCT00016404001 | |
| 22420 chr1 manual_curation CDS 34289210 34289507 . - 0 Parent=GSCOCT00016404001 | |
| 22421 chr1 manual_curation CDS 34286281 34286691 . - 1 Parent=GSCOCT00016404001 | |
| 22422 chr1 manual_curation CDS 34285557 34285682 . - 1 Parent=GSCOCT00016404001 | |
| 22423 chr1 manual_curation CDS 34285199 34285321 . - 1 Parent=GSCOCT00016404001 | |
| 22424 chr1 manual_curation CDS 34284420 34284494 . - 1 Parent=GSCOCT00016404001 | |
| 22425 chr1 manual_curation CDS 34284100 34284174 . - 1 Parent=GSCOCT00016404001 | |
| 22426 chr1 manual_curation CDS 34283758 34283862 . - 1 Parent=GSCOCT00016404001 | |
| 22427 chr1 manual_curation CDS 34283232 34283492 . - 1 Parent=GSCOCT00016404001 | |
| 22428 chr1 manual_curation CDS 34282739 34282800 . - 1 Parent=GSCOCT00016404001 | |
| 22429 chr1 manual_curation CDS 34282178 34282636 . - 0 Parent=GSCOCT00016404001 | |
| 22430 chr1 manual_curation gene 34295860 34300294 . + . ID=GSCOCG00016403001;Name=Cc01_g16760 | |
| 22431 chr1 manual_curation mRNA 34295860 34300294 . + . ID=GSCOCT00016403001;Parent=GSCOCG00016403001;Name=Cc01_g16760 | |
| 22432 chr1 manual_curation polypeptide 34296253 34299797 . + . ID=GSCOCP00016403001;Dbxref=InterPro:IPR002864,PFAM:PF01643,SwissProt:Q39513,SwissProt:Q42712,SwissProt:Q9SQI3,TAIR:AT1G08510.1,TAIR:AT3G25110.1,TAIR:AT4G13050.1,TrEMBL:F6I751,TrEMBL:G3F052,TrEMBL:Q42715;Derives_from=GSCOCT00016403001;Name=Cc01_g16760;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Oleoyl-acyl carrier protein thioesterase%2C chloroplastic (Fragment),CC_functional_completeness:complete,CC_gene:FATA,CC_gene:FATB1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016403001~ Oleoyl-acyl carrier protein thioesterase%2C chloroplastic (Fragment)~ FATA~ complete;original_location=complement(join(2954588..2954938%2C2953589..2953722%2C2953382..2953495%2C2953011..2953106%2C2952310..2952397%2C2952168..2952236%2C2951394..2951666));owner=coffea | |
| 22433 chr1 manual_curation exon 34299525 34300294 . + . Parent=GSCOCT00016403001 | |
| 22434 chr1 manual_curation exon 34298955 34299023 . + . Parent=GSCOCT00016403001 | |
| 22435 chr1 manual_curation exon 34298794 34298881 . + . Parent=GSCOCT00016403001 | |
| 22436 chr1 manual_curation exon 34298085 34298180 . + . Parent=GSCOCT00016403001 | |
| 22437 chr1 manual_curation exon 34297696 34297809 . + . Parent=GSCOCT00016403001 | |
| 22438 chr1 manual_curation exon 34297469 34297602 . + . Parent=GSCOCT00016403001 | |
| 22439 chr1 manual_curation exon 34295860 34296603 . + . Parent=GSCOCT00016403001 | |
| 22440 chr1 manual_curation CDS 34299525 34299797 . + 0 Parent=GSCOCT00016403001 | |
| 22441 chr1 manual_curation CDS 34298955 34299023 . + 0 Parent=GSCOCT00016403001 | |
| 22442 chr1 manual_curation CDS 34298794 34298881 . + 2 Parent=GSCOCT00016403001 | |
| 22443 chr1 manual_curation CDS 34298085 34298180 . + 2 Parent=GSCOCT00016403001 | |
| 22444 chr1 manual_curation CDS 34297696 34297809 . + 2 Parent=GSCOCT00016403001 | |
| 22445 chr1 manual_curation CDS 34297469 34297602 . + 0 Parent=GSCOCT00016403001 | |
| 22446 chr1 manual_curation CDS 34296253 34296603 . + 0 Parent=GSCOCT00016403001 | |
| 22447 chr1 manual_curation gene 34301964 34306714 . - . ID=GSCOCG00016402001;Name=Cc01_g16770 | |
| 22448 chr1 manual_curation mRNA 34301964 34306714 . - . ID=GSCOCT00016402001;Parent=GSCOCG00016402001;Name=Cc01_g16770 | |
| 22449 chr1 manual_curation polypeptide 34302887 34305196 . - . ID=GSCOCP00016402001;Dbxref=InterPro:IPR001841,InterPro:IPR017907,InterPro:IPR018957,PFAM:PF00097,PROFILE:PS50089,PROSITE:PS00518,SMART:SM00184,TAIR:AT3G07200.1,TAIR:AT5G48655.2,TrEMBL:B9IBA6,TrEMBL:C6T066,TrEMBL:F6GZD0;Derives_from=GSCOCT00016402001;Name=Cc01_g16770;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative RING/U-box superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016402001~ Putative RING/U-box superfamily protein~ unknown_gene~ complete;original_location=join(2945995..2946234%2C2946357..2946414%2C2947000..2947118%2C2948062..2948304);owner=coffea | |
| 22450 chr1 manual_curation exon 34306542 34306714 . - . Parent=GSCOCT00016402001 | |
| 22451 chr1 manual_curation exon 34301964 34302329 . - . Parent=GSCOCT00016402001 | |
| 22452 chr1 manual_curation exon 34304957 34305244 . - . Parent=GSCOCT00016402001 | |
| 22453 chr1 manual_curation exon 34304777 34304834 . - . Parent=GSCOCT00016402001 | |
| 22454 chr1 manual_curation exon 34304073 34304191 . - . Parent=GSCOCT00016402001 | |
| 22455 chr1 manual_curation exon 34302879 34303129 . - . Parent=GSCOCT00016402001 | |
| 22456 chr1 manual_curation CDS 34304957 34305196 . - 0 Parent=GSCOCT00016402001 | |
| 22457 chr1 manual_curation CDS 34304777 34304834 . - 0 Parent=GSCOCT00016402001 | |
| 22458 chr1 manual_curation CDS 34304073 34304191 . - 1 Parent=GSCOCT00016402001 | |
| 22459 chr1 manual_curation CDS 34302887 34303129 . - 0 Parent=GSCOCT00016402001 | |
| 22460 chr1 manual_curation gene 34310623 34312536 . - . ID=GSCOCG00016401001;Name=Cc01_g16780 | |
| 22461 chr1 manual_curation mRNA 34310623 34312536 . - . ID=GSCOCT00016401001;Parent=GSCOCG00016401001;Name=Cc01_g16780 | |
| 22462 chr1 manual_curation polypeptide 34310740 34312536 . - . ID=GSCOCP00016401001;Dbxref=InterPro:IPR003874,PANTHER:PTHR10507,PFAM:PF02724,SwissProt:O74113,SwissProt:O75419,SwissProt:Q55GA4,TAIR:AT3G25100.1,TrEMBL:A5B0Z8,TrEMBL:B9T3C8,TrEMBL:F6HNZ8;Derives_from=GSCOCT00016401001;Name=Cc01_g16780;Ontology_term=CC_evidence_code:ISS,GO:0006270,CC_EC_number:missing_EC_number,PRODUCT:Putative Cell division control protein 45 homolog,CC_functional_completeness:complete,CC_gene:cdc45,CC_gene:sna41,CC_gene:CDC45;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016401001~ Putative Cell division control protein 45 homolog~ cdc45~ complete;original_location=2938655..2940451;owner=coffea | |
| 22463 chr1 manual_curation exon 34310623 34312536 . - . Parent=GSCOCT00016401001 | |
| 22464 chr1 manual_curation CDS 34310740 34312536 . - 0 Parent=GSCOCT00016401001 | |
| 22465 chr1 manual_curation gene 34313894 34317791 . - . ID=GSCOCG00016400001;Name=Cc01_g16790 | |
| 22466 chr1 manual_curation mRNA 34313894 34317791 . - . ID=GSCOCT00016400001;Parent=GSCOCG00016400001;Name=Cc01_g16790 | |
| 22467 chr1 manual_curation polypeptide 34314621 34316756 . - . ID=GSCOCP00016400001;Dbxref=InterPro:IPR008700,PFAM:PF05627,SwissProt:Q8GYN5,TAIR:AT3G25070.1,TrEMBL:A5BB95,TrEMBL:D2J0X9,TrEMBL:F6HRH5;Derives_from=GSCOCT00016400001;Name=Cc01_g16790;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative RPM1-interacting protein 4,CC_functional_completeness:complete,CC_gene:RIN4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016400001~ Putative RPM1-interacting protein 4~ RIN4~ complete;original_location=join(2934435..2934443%2C2935416..2935946%2C2936168..2936362%2C2936541..2936570);owner=coffea | |
| 22468 chr1 manual_curation exon 34316748 34317791 . - . Parent=GSCOCT00016400001 | |
| 22469 chr1 manual_curation exon 34315245 34315775 . - . Parent=GSCOCT00016400001 | |
| 22470 chr1 manual_curation exon 34314829 34315023 . - . Parent=GSCOCT00016400001 | |
| 22471 chr1 manual_curation exon 34313894 34314650 . - . Parent=GSCOCT00016400001 | |
| 22472 chr1 manual_curation CDS 34316748 34316756 . - 0 Parent=GSCOCT00016400001 | |
| 22473 chr1 manual_curation CDS 34315245 34315775 . - 0 Parent=GSCOCT00016400001 | |
| 22474 chr1 manual_curation CDS 34314829 34315023 . - 0 Parent=GSCOCT00016400001 | |
| 22475 chr1 manual_curation CDS 34314621 34314650 . - 0 Parent=GSCOCT00016400001 | |
| 22476 chr1 manual_curation gene 34322194 34324504 . + . ID=GSCOCG00016398001;Name=Cc01_g16800 | |
| 22477 chr1 manual_curation mRNA 34322194 34324504 . + . ID=GSCOCT00016398001;Parent=GSCOCG00016398001;Name=Cc01_g16800 | |
| 22478 chr1 manual_curation polypeptide 34322194 34324066 . + . ID=GSCOCP00016398001;Dbxref=InterPro:IPR008417,PANTHER:PTHR12701,PFAM:PF05529,TAIR:AT3G07190.1,TAIR:AT5G42570.1,TAIR:AT5G48660.1,TrEMBL:A9PGI3,TrEMBL:B9IBA7,TrEMBL:F6HJI2;Derives_from=GSCOCT00016398001;Name=Cc01_g16800;Ontology_term=CC_evidence_code:ISS,GO:0005783,GO:0006886,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:B-cell receptor-associated protein 31-like,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016398001~ B-cell receptor-associated protein 31-like~ unknown_gene~ complete;original_location=complement(join(2928718..2928997%2C2927125..2927495));owner=coffea | |
| 22479 chr1 manual_curation exon 34323696 34324504 . + . Parent=GSCOCT00016398001 | |
| 22480 chr1 manual_curation exon 34322194 34322473 . + . Parent=GSCOCT00016398001 | |
| 22481 chr1 manual_curation CDS 34323696 34324066 . + 1 Parent=GSCOCT00016398001 | |
| 22482 chr1 manual_curation CDS 34322194 34322473 . + 0 Parent=GSCOCT00016398001 | |
| 22483 chr1 manual_curation gene 34325845 34327884 . - . ID=GSCOCG00016397001;Name=Cc01_g16810 | |
| 22484 chr1 manual_curation mRNA 34325845 34327884 . - . ID=GSCOCT00016397001;Parent=GSCOCG00016397001;Name=Cc01_g16810 | |
| 22485 chr1 manual_curation polypeptide 34325845 34327884 . - . ID=GSCOCP00016397001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q9LJR6,SwissProt:Q9LTV8,SwissProt:Q9SUH6,TAIR:AT3G12770.1,TAIR:AT3G25060.1,TAIR:AT4G30700.1,TIGRFAMs:TIGR00756,TrEMBL:B9GQK7,TrEMBL:C5WTL0,TrEMBL:F2EEX2;Derives_from=GSCOCT00016397001;Name=Cc01_g16810;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative pentatricopeptide repeat-containing protein At3g25060%2C mitochondrial,CC_functional_completeness:complete,CC_gene:PCMP-E96,CC_gene:PCMP-H43,CC_gene:DYW9;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016397001~ Putative pentatricopeptide repeat-containing protein At3g25060%2C mitochondrial~ PCMP-E96~ complete;original_location=2923307..2925346;owner=coffea | |
| 22486 chr1 manual_curation exon 34325845 34327884 . - . Parent=GSCOCT00016397001 | |
| 22487 chr1 manual_curation CDS 34325845 34327884 . - 0 Parent=GSCOCT00016397001 | |
| 22488 chr1 manual_curation gene 34328286 34333473 . + . ID=GSCOCG00016396001;Name=Cc01_g16820 | |
| 22489 chr1 manual_curation mRNA 34328286 34333473 . + . ID=GSCOCT00016396001;Parent=GSCOCG00016396001;Name=Cc01_g16820 | |
| 22490 chr1 manual_curation polypeptide 34328395 34333151 . + . ID=GSCOCP00016396001;Dbxref=InterPro:IPR019540,PFAM:PF10510,SwissProt:Q5XI31,SwissProt:Q6PD26,SwissProt:Q96S52,TAIR:AT3G07180.1,TrEMBL:B9S501,TrEMBL:I1KZ53,TrEMBL:I1N268;Derives_from=GSCOCT00016396001;Name=Cc01_g16820;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative GPI transamidase component PIG-S,CC_functional_completeness:complete,CC_gene:Pigs,CC_gene:PIGS;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016396001~ Putative GPI transamidase component PIG-S~ Pigs~ complete;original_location=complement(join(2922727..2922796%2C2921967..2922600%2C2921549..2921633%2C2921320..2921409%2C2920988..2921061%2C2920357..2920441%2C2920170..2920259%2C2919606..2919736%2C2919051..2919132%2C2918928..2918975%2C2918621..2918693%2C2918420..2918523%2C2918040..2918150));owner=coffea | |
| 22491 chr1 manual_curation exon 34333041 34333473 . + . Parent=GSCOCT00016396001 | |
| 22492 chr1 manual_curation exon 34332668 34332771 . + . Parent=GSCOCT00016396001 | |
| 22493 chr1 manual_curation exon 34332498 34332570 . + . Parent=GSCOCT00016396001 | |
| 22494 chr1 manual_curation exon 34332216 34332263 . + . Parent=GSCOCT00016396001 | |
| 22495 chr1 manual_curation exon 34332059 34332140 . + . Parent=GSCOCT00016396001 | |
| 22496 chr1 manual_curation exon 34331455 34331585 . + . Parent=GSCOCT00016396001 | |
| 22497 chr1 manual_curation exon 34330932 34331021 . + . Parent=GSCOCT00016396001 | |
| 22498 chr1 manual_curation exon 34330750 34330834 . + . Parent=GSCOCT00016396001 | |
| 22499 chr1 manual_curation exon 34330130 34330203 . + . Parent=GSCOCT00016396001 | |
| 22500 chr1 manual_curation exon 34329782 34329871 . + . Parent=GSCOCT00016396001 | |
| 22501 chr1 manual_curation exon 34329558 34329642 . + . Parent=GSCOCT00016396001 | |
| 22502 chr1 manual_curation exon 34328591 34329224 . + . Parent=GSCOCT00016396001 | |
| 22503 chr1 manual_curation exon 34328286 34328464 . + . Parent=GSCOCT00016396001 | |
| 22504 chr1 manual_curation CDS 34333041 34333151 . + 0 Parent=GSCOCT00016396001 | |
| 22505 chr1 manual_curation CDS 34332668 34332771 . + 1 Parent=GSCOCT00016396001 | |
| 22506 chr1 manual_curation CDS 34332498 34332570 . + 0 Parent=GSCOCT00016396001 | |
| 22507 chr1 manual_curation CDS 34332216 34332263 . + 0 Parent=GSCOCT00016396001 | |
| 22508 chr1 manual_curation CDS 34332059 34332140 . + 2 Parent=GSCOCT00016396001 | |
| 22509 chr1 manual_curation CDS 34331455 34331585 . + 0 Parent=GSCOCT00016396001 | |
| 22510 chr1 manual_curation CDS 34330932 34331021 . + 0 Parent=GSCOCT00016396001 | |
| 22511 chr1 manual_curation CDS 34330750 34330834 . + 2 Parent=GSCOCT00016396001 | |
| 22512 chr1 manual_curation CDS 34330130 34330203 . + 0 Parent=GSCOCT00016396001 | |
| 22513 chr1 manual_curation CDS 34329782 34329871 . + 0 Parent=GSCOCT00016396001 | |
| 22514 chr1 manual_curation CDS 34329558 34329642 . + 2 Parent=GSCOCT00016396001 | |
| 22515 chr1 manual_curation CDS 34328591 34329224 . + 1 Parent=GSCOCT00016396001 | |
| 22516 chr1 manual_curation CDS 34328395 34328464 . + 0 Parent=GSCOCT00016396001 | |
| 22517 chr1 manual_curation gene 34334173 34339264 . - . ID=GSCOCG00016395001;Name=Cc01_g16830 | |
| 22518 chr1 manual_curation mRNA 34334173 34339264 . - . ID=GSCOCT00016395001;Parent=GSCOCG00016395001;Name=Cc01_g16830 | |
| 22519 chr1 manual_curation polypeptide 34334671 34338901 . - . ID=GSCOCP00016395001;Dbxref=GENE3D:G3DSA:1.10.150.50,InterPro:IPR001660,InterPro:IPR010993,InterPro:IPR013761,InterPro:IPR021129,PFAM:PF00536,PROFILE:PS50105,SMART:SM00454,SUPERFAMILY:SSF47769,TAIR:AT1G70180.2,TAIR:AT3G07170.1,TAIR:AT5G48680.1,TrEMBL:B9GQK4,TrEMBL:B9IBA0,TrEMBL:D7SRQ5;Derives_from=GSCOCT00016395001;Name=Cc01_g16830;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Sterile alpha motif (SAM) domain-containing protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016395001~ Sterile alpha motif (SAM) domain-containing protein~ unknown_gene~ complete;original_location=join(2912290..2912396%2C2914373..2914434%2C2914584..2914840%2C2915236..2915307%2C2915391..2915453%2C2916476..2916520);owner=coffea | |
| 22520 chr1 manual_curation exon 34338795 34339264 . - . Parent=GSCOCT00016395001 | |
| 22521 chr1 manual_curation exon 34336757 34336818 . - . Parent=GSCOCT00016395001 | |
| 22522 chr1 manual_curation exon 34336351 34336607 . - . Parent=GSCOCT00016395001 | |
| 22523 chr1 manual_curation exon 34335884 34335955 . - . Parent=GSCOCT00016395001 | |
| 22524 chr1 manual_curation exon 34335738 34335800 . - . Parent=GSCOCT00016395001 | |
| 22525 chr1 manual_curation exon 34334173 34334715 . - . Parent=GSCOCT00016395001 | |
| 22526 chr1 manual_curation CDS 34338795 34338901 . - 0 Parent=GSCOCT00016395001 | |
| 22527 chr1 manual_curation CDS 34336757 34336818 . - 2 Parent=GSCOCT00016395001 | |
| 22528 chr1 manual_curation CDS 34336351 34336607 . - 1 Parent=GSCOCT00016395001 | |
| 22529 chr1 manual_curation CDS 34335884 34335955 . - 0 Parent=GSCOCT00016395001 | |
| 22530 chr1 manual_curation CDS 34335738 34335800 . - 0 Parent=GSCOCT00016395001 | |
| 22531 chr1 manual_curation CDS 34334671 34334715 . - 0 Parent=GSCOCT00016395001 | |
| 22532 chr1 manual_curation gene 34341001 34346179 . - . ID=GSCOCG00016394001;Name=Cc01_g16840 | |
| 22533 chr1 manual_curation mRNA 34341001 34346179 . - . ID=GSCOCT00016394001;Parent=GSCOCG00016394001;Name=Cc01_g16840 | |
| 22534 chr1 manual_curation polypeptide 34341363 34345917 . - . ID=GSCOCP00016394001;Dbxref=InterPro:IPR000449,InterPro:IPR006567,InterPro:IPR009060,InterPro:IPR015940,InterPro:IPR018997,PFAM:PF00627,PFAM:PF09409,PROFILE:PS50030,SMART:SM00165,SMART:SM00580,SUPERFAMILY:SSF46934,SwissProt:Q6GL77,SwissProt:Q6IP50,SwissProt:Q922Y1,TAIR:AT1G04850.1,TAIR:AT5G48690.1,TrEMBL:D7SNI5,TrEMBL:D7TR83,TrEMBL:I1KS98;Derives_from=GSCOCT00016394001;Name=Cc01_g16840;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative UBX domain-containing protein 1,CC_functional_completeness:modules,CC_gene:ubxn1,CC_gene:Ubxn1,CC_gene:ubxn1-a;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016394001~ Putative UBX domain-containing protein 1~ ubxn1~ modules;original_location=join(2905274..2905367%2C2905530..2905606%2C2906004..2906083%2C2906271..2906331%2C2907264..2907331%2C2907439..2907520%2C2907884..2907967%2C2908063..2908158%2C2908338..2908457%2C2909123..2909298%2C2909807..2909828);owner=coffea | |
| 22535 chr1 manual_curation exon 34345824 34346179 . - . Parent=GSCOCT00016394001 | |
| 22536 chr1 manual_curation exon 34345585 34345661 . - . Parent=GSCOCT00016394001 | |
| 22537 chr1 manual_curation exon 34345108 34345187 . - . Parent=GSCOCT00016394001 | |
| 22538 chr1 manual_curation exon 34344860 34344920 . - . Parent=GSCOCT00016394001 | |
| 22539 chr1 manual_curation exon 34343860 34343927 . - . Parent=GSCOCT00016394001 | |
| 22540 chr1 manual_curation exon 34343671 34343752 . - . Parent=GSCOCT00016394001 | |
| 22541 chr1 manual_curation exon 34343224 34343307 . - . Parent=GSCOCT00016394001 | |
| 22542 chr1 manual_curation exon 34343033 34343128 . - . Parent=GSCOCT00016394001 | |
| 22543 chr1 manual_curation exon 34342734 34342853 . - . Parent=GSCOCT00016394001 | |
| 22544 chr1 manual_curation exon 34341893 34342068 . - . Parent=GSCOCT00016394001 | |
| 22545 chr1 manual_curation exon 34341001 34341384 . - . Parent=GSCOCT00016394001 | |
| 22546 chr1 manual_curation CDS 34345824 34345917 . - 0 Parent=GSCOCT00016394001 | |
| 22547 chr1 manual_curation CDS 34345585 34345661 . - 1 Parent=GSCOCT00016394001 | |
| 22548 chr1 manual_curation CDS 34345108 34345187 . - 0 Parent=GSCOCT00016394001 | |
| 22549 chr1 manual_curation CDS 34344860 34344920 . - 2 Parent=GSCOCT00016394001 | |
| 22550 chr1 manual_curation CDS 34343860 34343927 . - 0 Parent=GSCOCT00016394001 | |
| 22551 chr1 manual_curation CDS 34343671 34343752 . - 2 Parent=GSCOCT00016394001 | |
| 22552 chr1 manual_curation CDS 34343224 34343307 . - 0 Parent=GSCOCT00016394001 | |
| 22553 chr1 manual_curation CDS 34343033 34343128 . - 0 Parent=GSCOCT00016394001 | |
| 22554 chr1 manual_curation CDS 34342734 34342853 . - 0 Parent=GSCOCT00016394001 | |
| 22555 chr1 manual_curation CDS 34341893 34342068 . - 0 Parent=GSCOCT00016394001 | |
| 22556 chr1 manual_curation CDS 34341363 34341384 . - 2 Parent=GSCOCT00016394001 | |
| 22557 chr1 manual_curation gene 34350189 34352373 . + . ID=GSCOCG00016393001;Name=Cc01_g16850 | |
| 22558 chr1 manual_curation mRNA 34350189 34352373 . + . ID=GSCOCT00016393001;Parent=GSCOCG00016393001;Name=Cc01_g16850 | |
| 22559 chr1 manual_curation polypeptide 34350471 34351883 . + . ID=GSCOCP00016393001;Dbxref=TAIR:AT3G07150.1,TrEMBL:B9S505,TrEMBL:D7L639,TrEMBL:Q9SFU5;Derives_from=GSCOCT00016393001;Name=Cc01_g16850;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B Has 19 Blast hits to 19 proteins in 8 species,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016393001~ Putative unknown protein%3B Has 19 Blast hits to 19 proteins in 8 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 19%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(2900417..2900720%2C2899852..2899977%2C2899634..2899750%2C2899308..2899438));owner=coffea | |
| 22560 chr1 manual_curation exon 34351753 34352373 . + . Parent=GSCOCT00016393001 | |
| 22561 chr1 manual_curation exon 34351441 34351557 . + . Parent=GSCOCT00016393001 | |
| 22562 chr1 manual_curation exon 34351214 34351339 . + . Parent=GSCOCT00016393001 | |
| 22563 chr1 manual_curation exon 34350189 34350774 . + . Parent=GSCOCT00016393001 | |
| 22564 chr1 manual_curation CDS 34351753 34351883 . + 1 Parent=GSCOCT00016393001 | |
| 22565 chr1 manual_curation CDS 34351441 34351557 . + 1 Parent=GSCOCT00016393001 | |
| 22566 chr1 manual_curation CDS 34351214 34351339 . + 1 Parent=GSCOCT00016393001 | |
| 22567 chr1 manual_curation CDS 34350471 34350774 . + 0 Parent=GSCOCT00016393001 | |
| 22568 chr1 manual_curation gene 34352547 34356568 . - . ID=GSCOCG00016392001;Name=Cc01_g16860 | |
| 22569 chr1 manual_curation mRNA 34352547 34356568 . - . ID=GSCOCT00016392001;Parent=GSCOCG00016392001;Name=Cc01_g16860 | |
| 22570 chr1 manual_curation polypeptide 34352801 34356349 . - . ID=GSCOCP00016392001;Dbxref=InterPro:IPR007245,PANTHER:PTHR12959,PFAM:PF04113,SwissProt:O94380,SwissProt:Q8BXQ2,SwissProt:Q969N2,TAIR:AT3G07140.1,TrEMBL:B9S506,TrEMBL:F6HQ50,TrEMBL:I1MMM4;Derives_from=GSCOCT00016392001;Name=Cc01_g16860;Ontology_term=CC_evidence_code:ISS,GO:0016021,GO:0042765,CC_EC_number:missing_EC_number,PRODUCT:Putative GPI transamidase component PIG-T,CC_functional_completeness:complete,CC_gene:PIGT,CC_gene:Pigt,CC_gene:SPBC1604.15;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016392001~ Putative GPI transamidase component PIG-T~ PIGT~ complete;original_location=join(2894842..2895069%2C2895840..2897111%2C2897304..2897453%2C2897547..2897727%2C2898209..2898390);owner=coffea | |
| 22571 chr1 manual_curation exon 34356122 34356568 . - . Parent=GSCOCT00016392001 | |
| 22572 chr1 manual_curation exon 34354080 34355351 . - . Parent=GSCOCT00016392001 | |
| 22573 chr1 manual_curation exon 34353738 34353887 . - . Parent=GSCOCT00016392001 | |
| 22574 chr1 manual_curation exon 34353464 34353644 . - . Parent=GSCOCT00016392001 | |
| 22575 chr1 manual_curation exon 34352547 34352982 . - . Parent=GSCOCT00016392001 | |
| 22576 chr1 manual_curation CDS 34356122 34356349 . - 0 Parent=GSCOCT00016392001 | |
| 22577 chr1 manual_curation CDS 34354080 34355351 . - 0 Parent=GSCOCT00016392001 | |
| 22578 chr1 manual_curation CDS 34353738 34353887 . - 0 Parent=GSCOCT00016392001 | |
| 22579 chr1 manual_curation CDS 34353464 34353644 . - 0 Parent=GSCOCT00016392001 | |
| 22580 chr1 manual_curation CDS 34352801 34352982 . - 1 Parent=GSCOCT00016392001 | |
| 22581 chr1 manual_curation gene 34357444 34359042 . - . ID=GSCOCG00016391001;Name=Cc01_g16870 | |
| 22582 chr1 manual_curation mRNA 34357444 34359042 . - . ID=GSCOCT00016391001;Parent=GSCOCG00016391001;Name=Cc01_g16870 | |
| 22583 chr1 manual_curation polypeptide 34357444 34358989 . - . ID=GSCOCP00016391001;Dbxref=GENE3D:G3DSA:2.60.120.200,InterPro:IPR000757,InterPro:IPR008264,InterPro:IPR008985,InterPro:IPR010713,InterPro:IPR013320,InterPro:IPR016455,PFAM:PF00722,PFAM:PF06955,PIR:PIRSF005604,PRINTS:PR00737,SUPERFAMILY:SSF49899,SwissProt:Q9LJR7,SwissProt:Q9SV60,SwissProt:Q9SV61,TAIR:AT3G25050.1,TAIR:AT4G13080.1,TAIR:AT4G13090.1,TrEMBL:A5BLS4,TrEMBL:D7TR85,TrEMBL:I1KZ59;Derives_from=GSCOCT00016391001;Name=Cc01_g16870;Ontology_term=CC_evidence_code:ISS,GO:0005618,GO:0005975,GO:0006073,GO:0016762,GO:0048046,CC_EC_number:2.4.1.207,PRODUCT:Xyloglucan endotransglucosylase/hydrolase protein 2,CC_functional_completeness:complete,CC_gene:XTH2,CC_gene:XTH1,CC_gene:XTH3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016391001~ Xyloglucan endotransglucosylase/hydrolase protein 2~ XTH2~ complete;original_location=join(2892202..2892367%2C2892704..2892804%2C2892931..2893127%2C2893342..2893747);owner=coffea | |
| 22584 chr1 manual_curation exon 34358824 34359042 . - . Parent=GSCOCT00016391001 | |
| 22585 chr1 manual_curation exon 34358387 34358487 . - . Parent=GSCOCT00016391001 | |
| 22586 chr1 manual_curation exon 34358064 34358260 . - . Parent=GSCOCT00016391001 | |
| 22587 chr1 manual_curation exon 34357444 34357849 . - . Parent=GSCOCT00016391001 | |
| 22588 chr1 manual_curation CDS 34358824 34358989 . - 0 Parent=GSCOCT00016391001 | |
| 22589 chr1 manual_curation CDS 34358387 34358487 . - 1 Parent=GSCOCT00016391001 | |
| 22590 chr1 manual_curation CDS 34358064 34358260 . - 0 Parent=GSCOCT00016391001 | |
| 22591 chr1 manual_curation CDS 34357444 34357849 . - 2 Parent=GSCOCT00016391001 | |
| 22592 chr1 manual_curation gene 34364948 34366857 . + . ID=GSCOCG00016390001;Name=Cc01_g16880 | |
| 22593 chr1 manual_curation mRNA 34364948 34366857 . + . ID=GSCOCT00016390001;Parent=GSCOCG00016390001;Name=Cc01_g16880 | |
| 22594 chr1 manual_curation polypeptide 34365051 34366510 . + . ID=GSCOCP00016390001;Dbxref=InterPro:IPR000626,InterPro:IPR019955,InterPro:IPR022617,PFAM:PF11976,PROFILE:PS50053,SMART:SM00213,SwissProt:B3H5R8,SwissProt:O13351,SwissProt:P55857,SwissProt:Q6DK72,SwissProt:Q7SZ22,SwissProt:Q9FLP5,TAIR:AT5G55160.2,TAIR:AT5G55170.1,TrEMBL:A5BU70,TrEMBL:D7UDJ9,TrEMBL:Q9SMD1;Derives_from=GSCOCT00016390001;Name=Cc01_g16880;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Small ubiquitin-related modifier 1,CC_functional_completeness:complete,CC_gene:SUMO2,CC_gene:SUMO1,CC_gene:pmt3,CC_gene:SUMO3,CC_gene:SUMO8,CC_gene:sumo3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016390001~ Small ubiquitin-related modifier 1~ SUMO2~ complete;original_location=complement(join(2886045..2886140%2C2884844..2884993%2C2884681..2884740));owner=coffea | |
| 22595 chr1 manual_curation exon 34366451 34366857 . + . Parent=GSCOCT00016390001 | |
| 22596 chr1 manual_curation exon 34366198 34366347 . + . Parent=GSCOCT00016390001 | |
| 22597 chr1 manual_curation exon 34364948 34365146 . + . Parent=GSCOCT00016390001 | |
| 22598 chr1 manual_curation CDS 34366451 34366510 . + 0 Parent=GSCOCT00016390001 | |
| 22599 chr1 manual_curation CDS 34366198 34366347 . + 0 Parent=GSCOCT00016390001 | |
| 22600 chr1 manual_curation CDS 34365051 34365146 . + 0 Parent=GSCOCT00016390001 | |
| 22601 chr1 manual_curation gene 34378677 34382429 . + . ID=GSCOCG00016389001;Name=Cc01_g16890 | |
| 22602 chr1 manual_curation mRNA 34378677 34382429 . + . ID=GSCOCT00016389001;Parent=GSCOCG00016389001;Name=Cc01_g16890 | |
| 22603 chr1 manual_curation polypeptide 34379254 34382202 . + . ID=GSCOCP00016389001;Dbxref=SwissProt:Q6NLW5,TAIR:AT5G48720.2,TrEMBL:B9S511,TrEMBL:C6TMG7,TrEMBL:I1N261;Derives_from=GSCOCT00016389001;Name=Cc01_g16890;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein XRI1,CC_functional_completeness:complete,CC_gene:XRI1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016389001~ Putative Protein XRI1~ XRI1~ complete;original_location=complement(join(2871915..2871937%2C2871268..2871317%2C2870814..2870942%2C2870573..2870712%2C2870012..2870075%2C2869828..2869921%2C2869708..2869736%2C2869525..2869605%2C2868989..2869263));owner=coffea | |
| 22604 chr1 manual_curation exon 34381928 34382429 . + . Parent=GSCOCT00016389001 | |
| 22605 chr1 manual_curation exon 34381586 34381666 . + . Parent=GSCOCT00016389001 | |
| 22606 chr1 manual_curation exon 34381455 34381483 . + . Parent=GSCOCT00016389001 | |
| 22607 chr1 manual_curation exon 34381270 34381363 . + . Parent=GSCOCT00016389001 | |
| 22608 chr1 manual_curation exon 34381116 34381179 . + . Parent=GSCOCT00016389001 | |
| 22609 chr1 manual_curation exon 34380479 34380618 . + . Parent=GSCOCT00016389001 | |
| 22610 chr1 manual_curation exon 34380249 34380377 . + . Parent=GSCOCT00016389001 | |
| 22611 chr1 manual_curation exon 34379874 34379923 . + . Parent=GSCOCT00016389001 | |
| 22612 chr1 manual_curation exon 34378677 34379276 . + . Parent=GSCOCT00016389001 | |
| 22613 chr1 manual_curation CDS 34381928 34382202 . + 1 Parent=GSCOCT00016389001 | |
| 22614 chr1 manual_curation CDS 34381586 34381666 . + 1 Parent=GSCOCT00016389001 | |
| 22615 chr1 manual_curation CDS 34381455 34381483 . + 2 Parent=GSCOCT00016389001 | |
| 22616 chr1 manual_curation CDS 34381270 34381363 . + 1 Parent=GSCOCT00016389001 | |
| 22617 chr1 manual_curation CDS 34381116 34381179 . + 0 Parent=GSCOCT00016389001 | |
| 22618 chr1 manual_curation CDS 34380479 34380618 . + 1 Parent=GSCOCT00016389001 | |
| 22619 chr1 manual_curation CDS 34380249 34380377 . + 1 Parent=GSCOCT00016389001 | |
| 22620 chr1 manual_curation CDS 34379874 34379923 . + 2 Parent=GSCOCT00016389001 | |
| 22621 chr1 manual_curation CDS 34379254 34379276 . + 0 Parent=GSCOCT00016389001 | |
| 22622 chr1 manual_curation gene 34384614 34387280 . - . ID=GSCOCG00016388001;Name=Cc01_g16900 | |
| 22623 chr1 manual_curation mRNA 34384614 34387280 . - . ID=GSCOCT00016388001;Parent=GSCOCG00016388001;Name=Cc01_g16900 | |
| 22624 chr1 manual_curation polypeptide 34385140 34385985 . - . ID=GSCOCP00016388001;Dbxref=InterPro:IPR001841,PROFILE:PS50089,SMART:SM00184,TAIR:AT3G07120.1,TAIR:AT3G25030.1,TAIR:AT4G13100.2,TrEMBL:A5AEU5,TrEMBL:F6I6Z1,TrEMBL:I1KZ64;Derives_from=GSCOCT00016388001;Name=Cc01_g16900;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative RING/U-box superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016388001~ Putative RING/U-box superfamily protein~ unknown_gene~ complete;original_location=2865206..2866051;owner=coffea | |
| 22625 chr1 manual_curation exon 34384614 34387280 . - . Parent=GSCOCT00016388001 | |
| 22626 chr1 manual_curation CDS 34385140 34385985 . - 0 Parent=GSCOCT00016388001 | |
| 22627 chr1 manual_curation gene 34390294 34390488 . + . ID=GSCOCG00016387001;Name=Cc01_g16910 | |
| 22628 chr1 manual_curation mRNA 34390294 34390488 . + . ID=GSCOCT00016387001;Parent=GSCOCG00016387001;Name=Cc01_g16910 | |
| 22629 chr1 manual_curation polypeptide 34390294 34390488 . + . ID=GSCOCP00016387001;Dbxref=InterPro:IPR003854,PFAM:PF02704,SwissProt:P46690,SwissProt:P47926,SwissProt:Q6NMQ7,TAIR:AT1G74670.1,TAIR:AT3G02885.1,TAIR:AT5G15230.1,TrEMBL:A9XNT2,TrEMBL:A9XNT3,TrEMBL:B6TAW1;Derives_from=GSCOCT00016387001;Name=Cc01_g16910;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Gibberellin-regulated protein 4,CC_functional_completeness:fragment,CC_gene:GASA4,CC_gene:GASA6,CC_gene:RSI-1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016387001~ Gibberellin-regulated protein 4~ GASA4~ fragment;original_location=complement(2860703..2860897);owner=coffea | |
| 22630 chr1 manual_curation exon 34390294 34390488 . + . Parent=GSCOCT00016387001 | |
| 22631 chr1 manual_curation CDS 34390294 34390488 . + 0 Parent=GSCOCT00016387001 | |
| 22632 chr1 manual_curation gene 34394594 34395768 . + . ID=GSCOCG00016386001;Name=Cc01_g16920 | |
| 22633 chr1 manual_curation mRNA 34394594 34395768 . + . ID=GSCOCT00016386001;Parent=GSCOCG00016386001;Name=Cc01_g16920 | |
| 22634 chr1 manual_curation polypeptide 34395041 34395425 . + . ID=GSCOCP00016386001;Dbxref=InterPro:IPR007513,PFAM:PF04419;Derives_from=GSCOCT00016386001;Name=Cc01_g16920;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterised protein family SERF,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016386001~ Putative Uncharacterised protein family SERF~ unknown_gene~ complete;original_location=complement(join(2856119..2856150%2C2855981..2856055%2C2855766..2855859));owner=coffea | |
| 22635 chr1 manual_curation exon 34394594 34394718 . + . Parent=GSCOCT00016386001 | |
| 22636 chr1 manual_curation exon 34395332 34395768 . + . Parent=GSCOCT00016386001 | |
| 22637 chr1 manual_curation exon 34395136 34395210 . + . Parent=GSCOCT00016386001 | |
| 22638 chr1 manual_curation exon 34394851 34395072 . + . Parent=GSCOCT00016386001 | |
| 22639 chr1 manual_curation CDS 34395332 34395425 . + 2 Parent=GSCOCT00016386001 | |
| 22640 chr1 manual_curation CDS 34395136 34395210 . + 2 Parent=GSCOCT00016386001 | |
| 22641 chr1 manual_curation CDS 34395041 34395072 . + 0 Parent=GSCOCT00016386001 | |
| 22642 chr1 manual_curation gene 34396697 34399412 . + . ID=GSCOCG00016385001;Name=Cc01_g16930 | |
| 22643 chr1 manual_curation mRNA 34396697 34399412 . + . ID=GSCOCT00016385001;Parent=GSCOCG00016385001;Name=Cc01_g16930 | |
| 22644 chr1 manual_curation polypeptide 34396897 34399412 . + . ID=GSCOCP00016385001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q9FKC3,SwissProt:Q9SCP4,SwissProt:Q9SQU6,TAIR:AT3G06430.1,TAIR:AT3G53170.1,TAIR:AT5G48730.1,TIGRFAMs:TIGR00756,TrEMBL:B9GQJ1,TrEMBL:B9SV96,TrEMBL:D7MMK8;Derives_from=GSCOCT00016385001;Name=Cc01_g16930;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At5g48730%2C chloroplastic,CC_functional_completeness:complete,CC_gene:At5g48730,CC_gene:At3g53170,CC_gene:EMB2750;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016385001~ Pentatricopeptide repeat-containing protein At5g48730%2C chloroplastic~ At5g48730~ complete;original_location=complement(join(2853896..2854294%2C2852896..2853302%2C2851779..2852487));owner=coffea | |
| 22645 chr1 manual_curation exon 34398704 34399412 . + . Parent=GSCOCT00016385001 | |
| 22646 chr1 manual_curation exon 34397889 34398295 . + . Parent=GSCOCT00016385001 | |
| 22647 chr1 manual_curation exon 34396697 34397295 . + . Parent=GSCOCT00016385001 | |
| 22648 chr1 manual_curation CDS 34398704 34399412 . + 2 Parent=GSCOCT00016385001 | |
| 22649 chr1 manual_curation CDS 34397889 34398295 . + 0 Parent=GSCOCT00016385001 | |
| 22650 chr1 manual_curation CDS 34396897 34397295 . + 0 Parent=GSCOCT00016385001 | |
| 22651 chr1 manual_curation gene 34399992 34401687 . + . ID=GSCOCG00016384001;Name=Cc01_g16940 | |
| 22652 chr1 manual_curation mRNA 34399992 34401687 . + . ID=GSCOCT00016384001;Parent=GSCOCG00016384001;Name=Cc01_g16940 | |
| 22653 chr1 manual_curation polypeptide 34399992 34401428 . + . ID=GSCOCP00016384001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q9FKC3,SwissProt:Q9SCP4,SwissProt:Q9SQU6,TAIR:AT3G06430.1,TAIR:AT3G53170.1,TAIR:AT5G48730.1,TIGRFAMs:TIGR00756,TrEMBL:B9GQJ1,TrEMBL:B9GQJ2,TrEMBL:F6I027;Derives_from=GSCOCT00016384001;Name=Cc01_g16940;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At5g48730%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:At5g48730,CC_gene:At3g53170,CC_gene:EMB2750;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016384001~ Pentatricopeptide repeat-containing protein At5g48730%2C chloroplastic~ At5g48730~ fragment;original_location=complement(join(2850862..2851199%2C2849763..2850453));owner=coffea | |
| 22654 chr1 manual_curation exon 34400738 34401687 . + . Parent=GSCOCT00016384001 | |
| 22655 chr1 manual_curation exon 34399992 34400329 . + . Parent=GSCOCT00016384001 | |
| 22656 chr1 manual_curation CDS 34400738 34401428 . + 2 Parent=GSCOCT00016384001 | |
| 22657 chr1 manual_curation CDS 34399992 34400329 . + 0 Parent=GSCOCT00016384001 | |
| 22658 chr1 manual_curation gene 34406076 34417071 . + . ID=GSCOCG00016382001;Name=Cc01_g16950 | |
| 22659 chr1 manual_curation mRNA 34406076 34417071 . + . ID=GSCOCT00016382001;Parent=GSCOCG00016382001;Name=Cc01_g16950 | |
| 22660 chr1 manual_curation polypeptide 34406135 34417071 . + . ID=GSCOCP00016382001;Dbxref=InterPro:IPR001005,InterPro:IPR006562,InterPro:IPR013999,InterPro:IPR014012,InterPro:IPR017877,PFAM:PF07529,PROFILE:PS50090,PROFILE:PS51204,SMART:SM00573,SMART:SM00717,SwissProt:Q8CHI8,SwissProt:Q96L91,TAIR:AT3G24870.1,TAIR:AT3G24880.1,TrEMBL:A5B9Z2,TrEMBL:B9S516,TrEMBL:F6I025;Derives_from=GSCOCT00016382001;Name=Cc01_g16950;Ontology_term=CC_evidence_code:ISS,GO:0003677,CC_EC_number:missing_EC_number,PRODUCT:Putative Helicase/SANT-associated%2C DNA binding protein,CC_functional_completeness:complete,CC_gene:Ep400,CC_gene:EP400;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016382001~ Putative Helicase/SANT-associated%2C DNA binding protein~ Ep400~ complete;original_location=complement(join(2844908..2845056%2C2844743..2844797%2C2844563..2844660%2C2842984..2844481%2C2842747..2842866%2C2842428..2842583%2C2840989..2841180%2C2840598..2840678%2C2839394..2839451%2C2838787..2839319%2C2838618..2838671%2C2838331..2838388%2C2838064..2838251%2C2837904..2837957%2C2837719..2837799%2C2837433..2837567%2C2837156..2837272%2C2836342..2836445%2C2835996..2836211%2C2835543..2835921%2C2834392..2834850%2C2834120..2834293));owner=coffea | |
| 22661 chr1 manual_curation exon 34416898 34417071 . + . Parent=GSCOCT00016382001 | |
| 22662 chr1 manual_curation exon 34416341 34416799 . + . Parent=GSCOCT00016382001 | |
| 22663 chr1 manual_curation exon 34415270 34415648 . + . Parent=GSCOCT00016382001 | |
| 22664 chr1 manual_curation exon 34414980 34415195 . + . Parent=GSCOCT00016382001 | |
| 22665 chr1 manual_curation exon 34414746 34414849 . + . Parent=GSCOCT00016382001 | |
| 22666 chr1 manual_curation exon 34413919 34414035 . + . Parent=GSCOCT00016382001 | |
| 22667 chr1 manual_curation exon 34413624 34413758 . + . Parent=GSCOCT00016382001 | |
| 22668 chr1 manual_curation exon 34413392 34413472 . + . Parent=GSCOCT00016382001 | |
| 22669 chr1 manual_curation exon 34413234 34413287 . + . Parent=GSCOCT00016382001 | |
| 22670 chr1 manual_curation exon 34412940 34413127 . + . Parent=GSCOCT00016382001 | |
| 22671 chr1 manual_curation exon 34412803 34412860 . + . Parent=GSCOCT00016382001 | |
| 22672 chr1 manual_curation exon 34412520 34412573 . + . Parent=GSCOCT00016382001 | |
| 22673 chr1 manual_curation exon 34411872 34412404 . + . Parent=GSCOCT00016382001 | |
| 22674 chr1 manual_curation exon 34411740 34411797 . + . Parent=GSCOCT00016382001 | |
| 22675 chr1 manual_curation exon 34410513 34410593 . + . Parent=GSCOCT00016382001 | |
| 22676 chr1 manual_curation exon 34410011 34410202 . + . Parent=GSCOCT00016382001 | |
| 22677 chr1 manual_curation exon 34408608 34408763 . + . Parent=GSCOCT00016382001 | |
| 22678 chr1 manual_curation exon 34408325 34408444 . + . Parent=GSCOCT00016382001 | |
| 22679 chr1 manual_curation exon 34406710 34408207 . + . Parent=GSCOCT00016382001 | |
| 22680 chr1 manual_curation exon 34406531 34406628 . + . Parent=GSCOCT00016382001 | |
| 22681 chr1 manual_curation exon 34406394 34406448 . + . Parent=GSCOCT00016382001 | |
| 22682 chr1 manual_curation exon 34406076 34406283 . + . Parent=GSCOCT00016382001 | |
| 22683 chr1 manual_curation CDS 34416898 34417071 . + 0 Parent=GSCOCT00016382001 | |
| 22684 chr1 manual_curation CDS 34416341 34416799 . + 0 Parent=GSCOCT00016382001 | |
| 22685 chr1 manual_curation CDS 34415270 34415648 . + 2 Parent=GSCOCT00016382001 | |
| 22686 chr1 manual_curation CDS 34414980 34415195 . + 2 Parent=GSCOCT00016382001 | |
| 22687 chr1 manual_curation CDS 34414746 34414849 . + 0 Parent=GSCOCT00016382001 | |
| 22688 chr1 manual_curation CDS 34413919 34414035 . + 0 Parent=GSCOCT00016382001 | |
| 22689 chr1 manual_curation CDS 34413624 34413758 . + 0 Parent=GSCOCT00016382001 | |
| 22690 chr1 manual_curation CDS 34413392 34413472 . + 0 Parent=GSCOCT00016382001 | |
| 22691 chr1 manual_curation CDS 34413234 34413287 . + 0 Parent=GSCOCT00016382001 | |
| 22692 chr1 manual_curation CDS 34412940 34413127 . + 1 Parent=GSCOCT00016382001 | |
| 22693 chr1 manual_curation CDS 34412803 34412860 . + 0 Parent=GSCOCT00016382001 | |
| 22694 chr1 manual_curation CDS 34412520 34412573 . + 0 Parent=GSCOCT00016382001 | |
| 22695 chr1 manual_curation CDS 34411872 34412404 . + 1 Parent=GSCOCT00016382001 | |
| 22696 chr1 manual_curation CDS 34411740 34411797 . + 0 Parent=GSCOCT00016382001 | |
| 22697 chr1 manual_curation CDS 34410513 34410593 . + 0 Parent=GSCOCT00016382001 | |
| 22698 chr1 manual_curation CDS 34410011 34410202 . + 0 Parent=GSCOCT00016382001 | |
| 22699 chr1 manual_curation CDS 34408608 34408763 . + 0 Parent=GSCOCT00016382001 | |
| 22700 chr1 manual_curation CDS 34408325 34408444 . + 0 Parent=GSCOCT00016382001 | |
| 22701 chr1 manual_curation CDS 34406710 34408207 . + 2 Parent=GSCOCT00016382001 | |
| 22702 chr1 manual_curation CDS 34406531 34406628 . + 0 Parent=GSCOCT00016382001 | |
| 22703 chr1 manual_curation CDS 34406394 34406448 . + 2 Parent=GSCOCT00016382001 | |
| 22704 chr1 manual_curation CDS 34406135 34406283 . + 0 Parent=GSCOCT00016382001 | |
| 22705 chr1 manual_curation gene 34420598 34422629 . - . ID=GSCOCG00016379001;Name=Cc01_g16960 | |
| 22706 chr1 manual_curation mRNA 34420598 34422629 . - . ID=GSCOCT00016379001;Parent=GSCOCG00016379001;Name=Cc01_g16960 | |
| 22707 chr1 manual_curation polypeptide 34421538 34422629 . - . ID=GSCOCP00016379001;Dbxref=InterPro:IPR006578,InterPro:IPR017877,PFAM:PF10545,PROFILE:PS50090,SMART:SM00595,TAIR:AT2G44730.1,TAIR:AT3G24860.1,TAIR:AT3G54390.1,TrEMBL:B9S517,TrEMBL:F6I024,TrEMBL:I1MMD4;Derives_from=GSCOCT00016379001;Name=Cc01_g16960;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Homeodomain-like superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016379001~ Putative Homeodomain-like superfamily protein~ unknown_gene~ complete;original_location=2828562..2829653;owner=coffea | |
| 22708 chr1 manual_curation exon 34420598 34422629 . - . Parent=GSCOCT00016379001 | |
| 22709 chr1 manual_curation CDS 34421538 34422629 . - 0 Parent=GSCOCT00016379001 | |
| 22710 chr1 manual_curation gene 34424021 34431305 . - . ID=GSCOCG00016378001;Name=Cc01_g16970 | |
| 22711 chr1 manual_curation mRNA 34424021 34431305 . - . ID=GSCOCT00016378001;Parent=GSCOCG00016378001;Name=Cc01_g16970 | |
| 22712 chr1 manual_curation polypeptide 34424625 34430391 . - . ID=GSCOCP00016378001;Dbxref=GENE3D:G3DSA:3.40.525.10,InterPro:IPR001251,InterPro:IPR008273,InterPro:IPR011074,PFAM:PF00650,PFAM:PF03765,PROFILE:PS50191,SMART:SM00516,SUPERFAMILY:SSF46938,SUPERFAMILY:SSF52087,SwissProt:P24280,SwissProt:P46250,SwissProt:Q10137,TAIR:AT2G21520.2,TAIR:AT3G24840.1,TAIR:AT4G39170.1,TrEMBL:B9S518,TrEMBL:D7U3L7,TrEMBL:I1KZ81;Derives_from=GSCOCT00016378001;Name=Cc01_g16970;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Sec14 cytosolic factor,CC_functional_completeness:modules,CC_gene:sec14,CC_gene:SEC14;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016378001~ Putative Sec14 cytosolic factor~ sec14~ modules;original_location=join(2820800..2820806%2C2820916..2821201%2C2822590..2822689%2C2823270..2823536%2C2823654..2823731%2C2823854..2823955%2C2824034..2824083%2C2824164..2824263%2C2824367..2824465%2C2824554..2824646%2C2825181..2825265%2C2825659..2826044%2C2826170..2826244%2C2826498..2826566);owner=coffea | |
| 22713 chr1 manual_curation exon 34430758 34431305 . - . Parent=GSCOCT00016378001 | |
| 22714 chr1 manual_curation exon 34430385 34430454 . - . Parent=GSCOCT00016378001 | |
| 22715 chr1 manual_curation exon 34429990 34430275 . - . Parent=GSCOCT00016378001 | |
| 22716 chr1 manual_curation exon 34428502 34428601 . - . Parent=GSCOCT00016378001 | |
| 22717 chr1 manual_curation exon 34427655 34427921 . - . Parent=GSCOCT00016378001 | |
| 22718 chr1 manual_curation exon 34427460 34427537 . - . Parent=GSCOCT00016378001 | |
| 22719 chr1 manual_curation exon 34427236 34427337 . - . Parent=GSCOCT00016378001 | |
| 22720 chr1 manual_curation exon 34427108 34427157 . - . Parent=GSCOCT00016378001 | |
| 22721 chr1 manual_curation exon 34426928 34427027 . - . Parent=GSCOCT00016378001 | |
| 22722 chr1 manual_curation exon 34426726 34426824 . - . Parent=GSCOCT00016378001 | |
| 22723 chr1 manual_curation exon 34426545 34426637 . - . Parent=GSCOCT00016378001 | |
| 22724 chr1 manual_curation exon 34425926 34426010 . - . Parent=GSCOCT00016378001 | |
| 22725 chr1 manual_curation exon 34425147 34425532 . - . Parent=GSCOCT00016378001 | |
| 22726 chr1 manual_curation exon 34424947 34425021 . - . Parent=GSCOCT00016378001 | |
| 22727 chr1 manual_curation exon 34424021 34424693 . - . Parent=GSCOCT00016378001 | |
| 22728 chr1 manual_curation CDS 34430385 34430391 . - 0 Parent=GSCOCT00016378001 | |
| 22729 chr1 manual_curation CDS 34429990 34430275 . - 1 Parent=GSCOCT00016378001 | |
| 22730 chr1 manual_curation CDS 34428502 34428601 . - 2 Parent=GSCOCT00016378001 | |
| 22731 chr1 manual_curation CDS 34427655 34427921 . - 0 Parent=GSCOCT00016378001 | |
| 22732 chr1 manual_curation CDS 34427460 34427537 . - 0 Parent=GSCOCT00016378001 | |
| 22733 chr1 manual_curation CDS 34427236 34427337 . - 0 Parent=GSCOCT00016378001 | |
| 22734 chr1 manual_curation CDS 34427108 34427157 . - 0 Parent=GSCOCT00016378001 | |
| 22735 chr1 manual_curation CDS 34426928 34427027 . - 2 Parent=GSCOCT00016378001 | |
| 22736 chr1 manual_curation CDS 34426726 34426824 . - 0 Parent=GSCOCT00016378001 | |
| 22737 chr1 manual_curation CDS 34426545 34426637 . - 0 Parent=GSCOCT00016378001 | |
| 22738 chr1 manual_curation CDS 34425926 34426010 . - 0 Parent=GSCOCT00016378001 | |
| 22739 chr1 manual_curation CDS 34425147 34425532 . - 1 Parent=GSCOCT00016378001 | |
| 22740 chr1 manual_curation CDS 34424947 34425021 . - 0 Parent=GSCOCT00016378001 | |
| 22741 chr1 manual_curation CDS 34424625 34424693 . - 0 Parent=GSCOCT00016378001 | |
| 22742 chr1 manual_curation gene 34435487 34440879 . + . ID=GSCOCG00016377001;Name=Cc01_g16980 | |
| 22743 chr1 manual_curation mRNA 34435487 34440879 . + . ID=GSCOCT00016377001;Parent=GSCOCG00016377001;Name=Cc01_g16980 | |
| 22744 chr1 manual_curation polypeptide 34436237 34440523 . + . ID=GSCOCP00016377001;Dbxref=InterPro:IPR015414,PFAM:PF09335,TAIR:AT4G13150.1,TrEMBL:B9S520,TrEMBL:F4JS93,TrEMBL:G7L174;Derives_from=GSCOCT00016377001;Name=Cc01_g16980;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B Has 83 Blast hits to 82 proteins in 37 species,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016377001~ unknown protein%3B Has 83 Blast hits to 82 proteins in 37 species: Archae - 0%3B Bacteria - 51%3B Metazoa - 0%3B Fungi - 0%3B Plants - 30%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(2814935..2814954%2C2813875..2814216%2C2813564..2813636%2C2813317..2813429%2C2813052..2813136%2C2812878..2812950%2C2812007..2812062%2C2811288..2811353%2C2810856..2810921%2C2810668..2810748));owner=coffea | |
| 22745 chr1 manual_curation exon 34440443 34440879 . + . Parent=GSCOCT00016377001 | |
| 22746 chr1 manual_curation exon 34440270 34440335 . + . Parent=GSCOCT00016377001 | |
| 22747 chr1 manual_curation exon 34439838 34439903 . + . Parent=GSCOCT00016377001 | |
| 22748 chr1 manual_curation exon 34439129 34439184 . + . Parent=GSCOCT00016377001 | |
| 22749 chr1 manual_curation exon 34438241 34438313 . + . Parent=GSCOCT00016377001 | |
| 22750 chr1 manual_curation exon 34438055 34438139 . + . Parent=GSCOCT00016377001 | |
| 22751 chr1 manual_curation exon 34437762 34437874 . + . Parent=GSCOCT00016377001 | |
| 22752 chr1 manual_curation exon 34437555 34437627 . + . Parent=GSCOCT00016377001 | |
| 22753 chr1 manual_curation exon 34436975 34437316 . + . Parent=GSCOCT00016377001 | |
| 22754 chr1 manual_curation exon 34435487 34436256 . + . Parent=GSCOCT00016377001 | |
| 22755 chr1 manual_curation CDS 34440443 34440523 . + 0 Parent=GSCOCT00016377001 | |
| 22756 chr1 manual_curation CDS 34440270 34440335 . + 0 Parent=GSCOCT00016377001 | |
| 22757 chr1 manual_curation CDS 34439838 34439903 . + 0 Parent=GSCOCT00016377001 | |
| 22758 chr1 manual_curation CDS 34439129 34439184 . + 1 Parent=GSCOCT00016377001 | |
| 22759 chr1 manual_curation CDS 34438241 34438313 . + 0 Parent=GSCOCT00016377001 | |
| 22760 chr1 manual_curation CDS 34438055 34438139 . + 2 Parent=GSCOCT00016377001 | |
| 22761 chr1 manual_curation CDS 34437762 34437874 . + 0 Parent=GSCOCT00016377001 | |
| 22762 chr1 manual_curation CDS 34437555 34437627 . + 2 Parent=GSCOCT00016377001 | |
| 22763 chr1 manual_curation CDS 34436975 34437316 . + 2 Parent=GSCOCT00016377001 | |
| 22764 chr1 manual_curation CDS 34436237 34436256 . + 0 Parent=GSCOCT00016377001 | |
| 22765 chr1 manual_curation gene 34441048 34446495 . - . ID=GSCOCG00016376001;Name=Cc01_g16990 | |
| 22766 chr1 manual_curation mRNA 34441048 34446495 . - . ID=GSCOCT00016376001;Parent=GSCOCG00016376001;Name=Cc01_g16990 | |
| 22767 chr1 manual_curation polypeptide 34441048 34446225 . - . ID=GSCOCP00016376001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR020635,InterPro:IPR021720,PFAM:PF00560,PFAM:PF07714,PFAM:PF11721,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:C0LGI2,SwissProt:C0LGV0,SwissProt:Q9LIG2,TAIR:AT1G67720.1,TAIR:AT2G37050.3,TAIR:AT5G48740.1,TrEMBL:B9S521,TrEMBL:D7U3K7,TrEMBL:I1MMC7;Derives_from=GSCOCT00016376001;Name=Cc01_g16990;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Probable LRR receptor-like serine/threonine-protein kinase At5g48740,CC_functional_completeness:complete,CC_gene:At5g48740,CC_gene:At1g67720,CC_gene:At3g21340;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016376001~ Probable LRR receptor-like serine/threonine-protein kinase At5g48740~ At5g48740~ complete;original_location=join(2804966..2805044%2C2805473..2806013%2C2806100..2806551%2C2806640..2806757%2C2806857..2806925%2C2807138..2807206%2C2807292..2807360%2C2807503..2807574%2C2807705..2807773%2C2807871..2808100%2C2808178..2808383%2C2808487..2808613%2C2808695..2808763%2C2809054..2809243%2C2809334..2809466%2C2809934..2810143);owner=coffea | |
| 22768 chr1 manual_curation exon 34446147 34446495 . - . Parent=GSCOCT00016376001 | |
| 22769 chr1 manual_curation exon 34445178 34445718 . - . Parent=GSCOCT00016376001 | |
| 22770 chr1 manual_curation exon 34444640 34445091 . - . Parent=GSCOCT00016376001 | |
| 22771 chr1 manual_curation exon 34444434 34444551 . - . Parent=GSCOCT00016376001 | |
| 22772 chr1 manual_curation exon 34444266 34444334 . - . Parent=GSCOCT00016376001 | |
| 22773 chr1 manual_curation exon 34443985 34444053 . - . Parent=GSCOCT00016376001 | |
| 22774 chr1 manual_curation exon 34443831 34443899 . - . Parent=GSCOCT00016376001 | |
| 22775 chr1 manual_curation exon 34443617 34443688 . - . Parent=GSCOCT00016376001 | |
| 22776 chr1 manual_curation exon 34443418 34443486 . - . Parent=GSCOCT00016376001 | |
| 22777 chr1 manual_curation exon 34443091 34443320 . - . Parent=GSCOCT00016376001 | |
| 22778 chr1 manual_curation exon 34442808 34443013 . - . Parent=GSCOCT00016376001 | |
| 22779 chr1 manual_curation exon 34442578 34442704 . - . Parent=GSCOCT00016376001 | |
| 22780 chr1 manual_curation exon 34442428 34442496 . - . Parent=GSCOCT00016376001 | |
| 22781 chr1 manual_curation exon 34441948 34442137 . - . Parent=GSCOCT00016376001 | |
| 22782 chr1 manual_curation exon 34441725 34441857 . - . Parent=GSCOCT00016376001 | |
| 22783 chr1 manual_curation exon 34441048 34441257 . - . Parent=GSCOCT00016376001 | |
| 22784 chr1 manual_curation CDS 34446147 34446225 . - 0 Parent=GSCOCT00016376001 | |
| 22785 chr1 manual_curation CDS 34445178 34445718 . - 1 Parent=GSCOCT00016376001 | |
| 22786 chr1 manual_curation CDS 34444640 34445091 . - 2 Parent=GSCOCT00016376001 | |
| 22787 chr1 manual_curation CDS 34444434 34444551 . - 1 Parent=GSCOCT00016376001 | |
| 22788 chr1 manual_curation CDS 34444266 34444334 . - 2 Parent=GSCOCT00016376001 | |
| 22789 chr1 manual_curation CDS 34443985 34444053 . - 2 Parent=GSCOCT00016376001 | |
| 22790 chr1 manual_curation CDS 34443831 34443899 . - 2 Parent=GSCOCT00016376001 | |
| 22791 chr1 manual_curation CDS 34443617 34443688 . - 2 Parent=GSCOCT00016376001 | |
| 22792 chr1 manual_curation CDS 34443418 34443486 . - 2 Parent=GSCOCT00016376001 | |
| 22793 chr1 manual_curation CDS 34443091 34443320 . - 2 Parent=GSCOCT00016376001 | |
| 22794 chr1 manual_curation CDS 34442808 34443013 . - 1 Parent=GSCOCT00016376001 | |
| 22795 chr1 manual_curation CDS 34442578 34442704 . - 0 Parent=GSCOCT00016376001 | |
| 22796 chr1 manual_curation CDS 34442428 34442496 . - 1 Parent=GSCOCT00016376001 | |
| 22797 chr1 manual_curation CDS 34441948 34442137 . - 1 Parent=GSCOCT00016376001 | |
| 22798 chr1 manual_curation CDS 34441725 34441857 . - 2 Parent=GSCOCT00016376001 | |
| 22799 chr1 manual_curation CDS 34441048 34441257 . - 0 Parent=GSCOCT00016376001 | |
| 22800 chr1 manual_curation gene 34457499 34459721 . - . ID=GSCOCG00016374001;Name=Cc01_g17000 | |
| 22801 chr1 manual_curation mRNA 34457499 34459721 . - . ID=GSCOCT00016374001;Parent=GSCOCG00016374001;Name=Cc01_g17000 | |
| 22802 chr1 manual_curation polypeptide 34457924 34459624 . - . ID=GSCOCP00016374001;Dbxref=GENE3D:G3DSA:3.90.1180.10,InterPro:IPR005755,InterPro:IPR005822,PANTHER:PTHR11545,PANTHER:PTHR11545:SF3,PFAM:PF00572,PROSITE:PS00783,SUPERFAMILY:SSF52161,SwissProt:Q9FKC0,SwissProt:Q9LRX8,SwissProt:Q9SFU1,TAIR:AT3G24830.1,TAIR:AT4G13170.1,TAIR:AT5G48760.1,TIGRFAMs:TIGR01077,TrEMBL:B6VC51,TrEMBL:B9RWI8,TrEMBL:F6I019;Derives_from=GSCOCT00016374001;Name=Cc01_g17000;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,GO:0015934,CC_EC_number:missing_EC_number,PRODUCT:60S ribosomal protein L13a-2,CC_functional_completeness:complete,CC_gene:RPL13AB,CC_gene:RPL13AD,CC_gene:RPL13AA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016374001~ 60S ribosomal protein L13a-2~ RPL13AB~ complete;original_location=join(2791567..2791838%2C2791970..2792086%2C2792303..2792390%2C2793124..2793267);owner=coffea | |
| 22803 chr1 manual_curation exon 34459353 34459721 . - . Parent=GSCOCT00016374001 | |
| 22804 chr1 manual_curation exon 34459105 34459221 . - . Parent=GSCOCT00016374001 | |
| 22805 chr1 manual_curation exon 34458801 34458888 . - . Parent=GSCOCT00016374001 | |
| 22806 chr1 manual_curation exon 34457499 34458067 . - . Parent=GSCOCT00016374001 | |
| 22807 chr1 manual_curation CDS 34459353 34459624 . - 0 Parent=GSCOCT00016374001 | |
| 22808 chr1 manual_curation CDS 34459105 34459221 . - 2 Parent=GSCOCT00016374001 | |
| 22809 chr1 manual_curation CDS 34458801 34458888 . - 2 Parent=GSCOCT00016374001 | |
| 22810 chr1 manual_curation CDS 34457924 34458067 . - 0 Parent=GSCOCT00016374001 | |
| 22811 chr1 manual_curation gene 34462567 34465235 . + . ID=GSCOCG00016373001;Name=Cc01_g17010 | |
| 22812 chr1 manual_curation mRNA 34462567 34465235 . + . ID=GSCOCT00016373001;Parent=GSCOCG00016373001;Name=Cc01_g17010 | |
| 22813 chr1 manual_curation polypeptide 34462848 34464839 . + . ID=GSCOCP00016373001;Dbxref=GENE3D:G3DSA:3.10.120.10,InterPro:IPR001199,InterPro:IPR018506,PFAM:PF00173,PRINTS:PR00363,PROFILE:PS50255,PROSITE:PS00191,SUPERFAMILY:SSF55856,SwissProt:O48845,SwissProt:P49098,SwissProt:P49099,TAIR:AT2G32720.1,TAIR:AT5G48810.1,TAIR:AT5G53560.1,TrEMBL:A5ATD8,TrEMBL:B9S527,TrEMBL:Q5V9L2;Derives_from=GSCOCT00016373001;Name=Cc01_g17010;Ontology_term=CC_evidence_code:ISS,GO:0020037,CC_EC_number:1.7.1.1,PRODUCT:Cytochrome b5,CC_functional_completeness:complete,CC_gene:At2g32720;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016373001~ Cytochrome b5~ At2g32720~ complete;original_location=complement(join(2788257..2788343%2C2786861..2786927%2C2786352..2786605));owner=coffea | |
| 22814 chr1 manual_curation exon 34464586 34465235 . + . Parent=GSCOCT00016373001 | |
| 22815 chr1 manual_curation exon 34464264 34464330 . + . Parent=GSCOCT00016373001 | |
| 22816 chr1 manual_curation exon 34462567 34462934 . + . Parent=GSCOCT00016373001 | |
| 22817 chr1 manual_curation CDS 34464586 34464839 . + 1 Parent=GSCOCT00016373001 | |
| 22818 chr1 manual_curation CDS 34464264 34464330 . + 0 Parent=GSCOCT00016373001 | |
| 22819 chr1 manual_curation CDS 34462848 34462934 . + 0 Parent=GSCOCT00016373001 | |
| 22820 chr1 manual_curation gene 34467401 34468423 . + . ID=GSCOCG00016372001;Name=Cc01_g17020 | |
| 22821 chr1 manual_curation mRNA 34467401 34468423 . + . ID=GSCOCT00016372001;Parent=GSCOCG00016372001;Name=Cc01_g17020 | |
| 22822 chr1 manual_curation polypeptide 34467401 34468423 . + . ID=GSCOCP00016372001;Dbxref=TrEMBL:A5ATD7,TrEMBL:B9GQH8,TrEMBL:B9S528;Derives_from=GSCOCT00016372001;Name=Cc01_g17020;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016372001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=complement(2782768..2783790);owner=coffea | |
| 22823 chr1 manual_curation exon 34467401 34468423 . + . Parent=GSCOCT00016372001 | |
| 22824 chr1 manual_curation CDS 34467401 34468423 . + 0 Parent=GSCOCT00016372001 | |
| 22825 chr1 manual_curation gene 34469186 34472486 . - . ID=GSCOCG00016371001;Name=Cc01_g17030 | |
| 22826 chr1 manual_curation mRNA 34469186 34472486 . - . ID=GSCOCT00016371001;Parent=GSCOCG00016371001;Name=Cc01_g17030 | |
| 22827 chr1 manual_curation polypeptide 34469793 34472486 . - . ID=GSCOCP00016371001;Dbxref=InterPro:IPR004249,PFAM:PF03000,SwissProt:Q9C9Z7,SwissProt:Q9FKB6,SwissProt:Q9SA69,TAIR:AT1G03010.1,TAIR:AT3G08570.1,TAIR:AT5G48800.1,TrEMBL:B9S529,TrEMBL:F6I009,TrEMBL:I1N1W1;Derives_from=GSCOCT00016371001;Name=Cc01_g17030;Ontology_term=CC_evidence_code:ISS,GO:0004871,GO:0009416,CC_EC_number:missing_EC_number,PRODUCT:BTB/POZ domain-containing protein At5g48800,CC_functional_completeness:complete,CC_gene:At5g48800,CC_gene:At1g03010,CC_gene:At3g08570;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016371001~ BTB/POZ domain-containing protein At5g48800~ At5g48800~ complete;original_location=join(2778705..2778770%2C2779244..2780416%2C2780880..2781398);owner=coffea | |
| 22828 chr1 manual_curation exon 34472421 34472486 . - . Parent=GSCOCT00016371001 | |
| 22829 chr1 manual_curation exon 34470775 34471947 . - . Parent=GSCOCT00016371001 | |
| 22830 chr1 manual_curation exon 34469186 34470311 . - . Parent=GSCOCT00016371001 | |
| 22831 chr1 manual_curation CDS 34472421 34472486 . - 0 Parent=GSCOCT00016371001 | |
| 22832 chr1 manual_curation CDS 34470775 34471947 . - 0 Parent=GSCOCT00016371001 | |
| 22833 chr1 manual_curation CDS 34469793 34470311 . - 0 Parent=GSCOCT00016371001 | |
| 22834 chr1 manual_curation gene 34480154 34483302 . + . ID=GSCOCG00016369001;Name=Cc01_g17040 | |
| 22835 chr1 manual_curation mRNA 34480154 34483302 . + . ID=GSCOCT00016369001;Parent=GSCOCG00016369001;Name=Cc01_g17040 | |
| 22836 chr1 manual_curation polypeptide 34480270 34483031 . + . ID=GSCOCP00016369001;Dbxref=InterPro:IPR005607,PFAM:PF03909,PROFILE:PS50858,SMART:SM00751,TAIR:AT1G26300.1,TAIR:AT1G69030.1,TAIR:AT3G24820.1,TrEMBL:B9GQH6,TrEMBL:C6TJV1,TrEMBL:Q9LRX9;Derives_from=GSCOCT00016369001;Name=Cc01_g17040;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative BSD domain-containing protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016369001~ Putative BSD domain-containing protein~ unknown_gene~ complete;original_location=complement(join(2770726..2770921%2C2770482..2770597%2C2769987..2770084%2C2768827..2769008%2C2768160..2768179));owner=coffea | |
| 22837 chr1 manual_curation exon 34483012 34483302 . + . Parent=GSCOCT00016369001 | |
| 22838 chr1 manual_curation exon 34482183 34482364 . + . Parent=GSCOCT00016369001 | |
| 22839 chr1 manual_curation exon 34481107 34481204 . + . Parent=GSCOCT00016369001 | |
| 22840 chr1 manual_curation exon 34480594 34480709 . + . Parent=GSCOCT00016369001 | |
| 22841 chr1 manual_curation exon 34480154 34480465 . + . Parent=GSCOCT00016369001 | |
| 22842 chr1 manual_curation CDS 34483012 34483031 . + 1 Parent=GSCOCT00016369001 | |
| 22843 chr1 manual_curation CDS 34482183 34482364 . + 2 Parent=GSCOCT00016369001 | |
| 22844 chr1 manual_curation CDS 34481107 34481204 . + 0 Parent=GSCOCT00016369001 | |
| 22845 chr1 manual_curation CDS 34480594 34480709 . + 1 Parent=GSCOCT00016369001 | |
| 22846 chr1 manual_curation CDS 34480270 34480465 . + 0 Parent=GSCOCT00016369001 | |
| 22847 chr1 manual_curation gene 34485628 34488900 . - . ID=GSCOCG00016368001;Name=Cc01_g17050 | |
| 22848 chr1 manual_curation mRNA 34485628 34488900 . - . ID=GSCOCT00016368001;Parent=GSCOCG00016368001;Name=Cc01_g17050 | |
| 22849 chr1 manual_curation polypeptide 34485960 34488667 . - . ID=GSCOCP00016368001;Dbxref=InterPro:IPR003175,InterPro:IPR016701,PANTHER:PTHR10265,PFAM:PF02234,PIR:PIRSF017811,SwissProt:Q8GYJ3,SwissProt:Q9FKB5,SwissProt:Q9LRY0,TAIR:AT2G32710.1,TAIR:AT3G24810.1,TAIR:AT5G48820.2,TrEMBL:D7U3J2,TrEMBL:F6GWG7,TrEMBL:H6WW32;Derives_from=GSCOCT00016368001;Name=Cc01_g17050;Ontology_term=CC_evidence_code:ISS,GO:0004861,GO:0005634,GO:0007050,CC_EC_number:missing_EC_number,PRODUCT:Cyclin-dependent kinase inhibitor 3,CC_functional_completeness:complete,CC_gene:KRP3,CC_gene:KRP5,CC_gene:KRP4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016368001~ Cyclin-dependent kinase inhibitor 3~ KRP3~ complete;original_location=join(2762524..2763017%2C2764752..2764946%2C2765162..2765231);owner=coffea | |
| 22850 chr1 manual_curation exon 34488174 34488900 . - . Parent=GSCOCT00016368001 | |
| 22851 chr1 manual_curation exon 34486245 34486439 . - . Parent=GSCOCT00016368001 | |
| 22852 chr1 manual_curation exon 34485628 34486029 . - . Parent=GSCOCT00016368001 | |
| 22853 chr1 manual_curation CDS 34488174 34488667 . - 0 Parent=GSCOCT00016368001 | |
| 22854 chr1 manual_curation CDS 34486245 34486439 . - 2 Parent=GSCOCT00016368001 | |
| 22855 chr1 manual_curation CDS 34485960 34486029 . - 2 Parent=GSCOCT00016368001 | |
| 22856 chr1 manual_curation gene 34489554 34492314 . - . ID=GSCOCG00016367001;Name=Cc01_g17060 | |
| 22857 chr1 manual_curation mRNA 34489554 34492314 . - . ID=GSCOCT00016367001;Parent=GSCOCG00016367001;Name=Cc01_g17060 | |
| 22858 chr1 manual_curation polypeptide 34489945 34492177 . - . ID=GSCOCP00016367001;Dbxref=InterPro:IPR003175,InterPro:IPR016701,PANTHER:PTHR10265,PFAM:PF02234,PIR:PIRSF017811,SwissProt:Q283L0,SwissProt:Q8GYJ3,SwissProt:Q9FKB5,TAIR:AT2G32710.1,TAIR:AT3G24810.1,TAIR:AT5G48820.2,TrEMBL:D7MMM8,TrEMBL:D7U3J2,TrEMBL:F4K388;Derives_from=GSCOCT00016367001;Name=Cc01_g17060;Ontology_term=CC_evidence_code:ISS,GO:0004861,GO:0005634,GO:0007050,CC_EC_number:missing_EC_number,PRODUCT:Cyclin-dependent kinase inhibitor 3,CC_functional_completeness:complete,CC_gene:KRP3,CC_gene:KRP5,CC_gene:KRP4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016367001~ Cyclin-dependent kinase inhibitor 3~ KRP3~ complete;original_location=join(2759014..2759474%2C2760880..2761071%2C2761177..2761246);owner=coffea | |
| 22859 chr1 manual_curation exon 34491717 34492314 . - . Parent=GSCOCT00016367001 | |
| 22860 chr1 manual_curation exon 34490120 34490311 . - . Parent=GSCOCT00016367001 | |
| 22861 chr1 manual_curation exon 34489554 34490014 . - . Parent=GSCOCT00016367001 | |
| 22862 chr1 manual_curation CDS 34491717 34492177 . - 0 Parent=GSCOCT00016367001 | |
| 22863 chr1 manual_curation CDS 34490120 34490311 . - 2 Parent=GSCOCT00016367001 | |
| 22864 chr1 manual_curation CDS 34489945 34490014 . - 2 Parent=GSCOCT00016367001 | |
| 22865 chr1 manual_curation gene 34498086 34498234 . - . ID=GSCOCG00016366001;Name=Cc01_g17070 | |
| 22866 chr1 manual_curation mRNA 34498086 34498234 . - . ID=GSCOCT00016366001;Parent=GSCOCG00016366001;Name=Cc01_g17070 | |
| 22867 chr1 manual_curation polypeptide 34498151 34498234 . - . ID=GSCOCP00016366001;Derives_from=GSCOCT00016366001;Name=Cc01_g17070;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016366001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(2752957..2752976%2C2753004..2753040);owner=coffea | |
| 22868 chr1 manual_curation exon 34498215 34498234 . - . Parent=GSCOCT00016366001 | |
| 22869 chr1 manual_curation exon 34498086 34498187 . - . Parent=GSCOCT00016366001 | |
| 22870 chr1 manual_curation CDS 34498215 34498234 . - 0 Parent=GSCOCT00016366001 | |
| 22871 chr1 manual_curation CDS 34498151 34498187 . - 2 Parent=GSCOCT00016366001 | |
| 22872 chr1 manual_curation gene 34498304 34502129 . - . ID=GSCOCG00016365001;Name=Cc01_g17080 | |
| 22873 chr1 manual_curation mRNA 34498304 34502129 . - . ID=GSCOCT00016365001;Parent=GSCOCG00016365001;Name=Cc01_g17080 | |
| 22874 chr1 manual_curation polypeptide 34498569 34502129 . - . ID=GSCOCP00016365001;Dbxref=InterPro:IPR000433,InterPro:IPR001841,InterPro:IPR017907,PFAM:PF00569,PROFILE:PS50089,PROFILE:PS50135,PROSITE:PS00518,SMART:SM00184,SMART:SM00291,SwissProt:Q8LBL5,TAIR:AT3G24800.1,TrEMBL:A9PEV7,TrEMBL:F6I011,TrEMBL:I1KZ98;Derives_from=GSCOCT00016365001;Name=Cc01_g17080;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative E3 ubiquitin-protein ligase PRT1,CC_functional_completeness:complete,CC_gene:PRT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016365001~ Putative E3 ubiquitin-protein ligase PRT1~ PRT1~ complete;original_location=join(2749062..2749165%2C2749955..2749983%2C2750057..2750236%2C2750327..2750707%2C2750868..2751071%2C2751697..2751812%2C2752275..2752622);owner=coffea | |
| 22875 chr1 manual_curation exon 34502026 34502129 . - . Parent=GSCOCT00016365001 | |
| 22876 chr1 manual_curation exon 34501208 34501236 . - . Parent=GSCOCT00016365001 | |
| 22877 chr1 manual_curation exon 34500955 34501134 . - . Parent=GSCOCT00016365001 | |
| 22878 chr1 manual_curation exon 34500484 34500864 . - . Parent=GSCOCT00016365001 | |
| 22879 chr1 manual_curation exon 34500120 34500323 . - . Parent=GSCOCT00016365001 | |
| 22880 chr1 manual_curation exon 34499379 34499494 . - . Parent=GSCOCT00016365001 | |
| 22881 chr1 manual_curation exon 34498304 34498916 . - . Parent=GSCOCT00016365001 | |
| 22882 chr1 manual_curation CDS 34502026 34502129 . - 0 Parent=GSCOCT00016365001 | |
| 22883 chr1 manual_curation CDS 34501208 34501236 . - 2 Parent=GSCOCT00016365001 | |
| 22884 chr1 manual_curation CDS 34500955 34501134 . - 1 Parent=GSCOCT00016365001 | |
| 22885 chr1 manual_curation CDS 34500484 34500864 . - 1 Parent=GSCOCT00016365001 | |
| 22886 chr1 manual_curation CDS 34500120 34500323 . - 1 Parent=GSCOCT00016365001 | |
| 22887 chr1 manual_curation CDS 34499379 34499494 . - 1 Parent=GSCOCT00016365001 | |
| 22888 chr1 manual_curation CDS 34498569 34498916 . - 0 Parent=GSCOCT00016365001 | |
| 22889 chr1 manual_curation gene 34504761 34508884 . - . ID=GSCOCG00016364001;Name=Cc01_g17090 | |
| 22890 chr1 manual_curation mRNA 34504761 34508884 . - . ID=GSCOCT00016364001;Parent=GSCOCG00016364001;Name=Cc01_g17090 | |
| 22891 chr1 manual_curation polypeptide 34505102 34508657 . - . ID=GSCOCP00016364001;Dbxref=InterPro:IPR000433,InterPro:IPR001841,InterPro:IPR017907,PFAM:PF00569,PROFILE:PS50089,PROFILE:PS50135,PROSITE:PS00518,SMART:SM00184,SwissProt:Q8LBL5,TAIR:AT3G24800.1,TrEMBL:A9PEV7,TrEMBL:F6I011,TrEMBL:I1KZ98;Derives_from=GSCOCT00016364001;Name=Cc01_g17090;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative E3 ubiquitin-protein ligase PRT1,CC_functional_completeness:complete,CC_gene:PRT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016364001~ Putative E3 ubiquitin-protein ligase PRT1~ PRT1~ complete;original_location=join(2742534..2742637%2C2743419..2743447%2C2743521..2743700%2C2743791..2744171%2C2744332..2744532%2C2745158..2745273%2C2745736..2746089);owner=coffea | |
| 22892 chr1 manual_curation exon 34508554 34508884 . - . Parent=GSCOCT00016364001 | |
| 22893 chr1 manual_curation exon 34507744 34507772 . - . Parent=GSCOCT00016364001 | |
| 22894 chr1 manual_curation exon 34507491 34507670 . - . Parent=GSCOCT00016364001 | |
| 22895 chr1 manual_curation exon 34507020 34507400 . - . Parent=GSCOCT00016364001 | |
| 22896 chr1 manual_curation exon 34506659 34506859 . - . Parent=GSCOCT00016364001 | |
| 22897 chr1 manual_curation exon 34505918 34506033 . - . Parent=GSCOCT00016364001 | |
| 22898 chr1 manual_curation exon 34504761 34505455 . - . Parent=GSCOCT00016364001 | |
| 22899 chr1 manual_curation CDS 34508554 34508657 . - 0 Parent=GSCOCT00016364001 | |
| 22900 chr1 manual_curation CDS 34507744 34507772 . - 2 Parent=GSCOCT00016364001 | |
| 22901 chr1 manual_curation CDS 34507491 34507670 . - 1 Parent=GSCOCT00016364001 | |
| 22902 chr1 manual_curation CDS 34507020 34507400 . - 1 Parent=GSCOCT00016364001 | |
| 22903 chr1 manual_curation CDS 34506659 34506859 . - 1 Parent=GSCOCT00016364001 | |
| 22904 chr1 manual_curation CDS 34505918 34506033 . - 1 Parent=GSCOCT00016364001 | |
| 22905 chr1 manual_curation CDS 34505102 34505455 . - 0 Parent=GSCOCT00016364001 | |
| 22906 chr1 manual_curation gene 34510371 34518230 . - . ID=GSCOCG00016363001;Name=Cc01_g17100 | |
| 22907 chr1 manual_curation mRNA 34510371 34518230 . - . ID=GSCOCT00016363001;Parent=GSCOCG00016363001;Name=Cc01_g17100 | |
| 22908 chr1 manual_curation polypeptide 34510994 34517783 . - . ID=GSCOCP00016363001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR006594,InterPro:IPR011046,InterPro:IPR013720,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019775,InterPro:IPR019781,InterPro:IPR019782,InterPro:IPR020472,PFAM:PF00400,PFAM:PF08513,PRINTS:PR00320,PROFILE:PS50082,PROFILE:PS50294,PROFILE:PS50896,PROSITE:PS00678,SMART:SM00320,SMART:SM00667,SUPERFAMILY:SSF50978,SwissProt:Q00808,SwissProt:Q8YRI1,SwissProt:Q9FUY2,TAIR:AT2G32700.7,TAIR:AT2G41500.1,TAIR:AT4G32551.2,TrEMBL:A5AYU2,TrEMBL:D7U3J7,TrEMBL:Q6H975;Derives_from=GSCOCT00016363001;Name=Cc01_g17100;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.7.11.7,PRODUCT:Putative Uncharacterized WD repeat-containing protein alr3466,CC_functional_completeness:complete,CC_gene:LUG,CC_gene:alr3466,CC_gene:HET-E1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016363001~ Putative Uncharacterized WD repeat-containing protein alr3466~ LUG~ complete;original_location=join(2733408..2733439%2C2733920..2734017%2C2734232..2734341%2C2734462..2734757%2C2734865..2734940%2C2735029..2735140%2C2735786..2735835%2C2735934..2736182%2C2736793..2736873%2C2737013..2737231%2C2737452..2737590%2C2737673..2737779%2C2737952..2738101%2C2738305..2738460%2C2738569..2738688%2C2738829..2739026%2C2740054..2740197);owner=coffea | |
| 22909 chr1 manual_curation exon 34517961 34518230 . - . Parent=GSCOCT00016363001 | |
| 22910 chr1 manual_curation exon 34517752 34517856 . - . Parent=GSCOCT00016363001 | |
| 22911 chr1 manual_curation exon 34517174 34517271 . - . Parent=GSCOCT00016363001 | |
| 22912 chr1 manual_curation exon 34516850 34516959 . - . Parent=GSCOCT00016363001 | |
| 22913 chr1 manual_curation exon 34516434 34516729 . - . Parent=GSCOCT00016363001 | |
| 22914 chr1 manual_curation exon 34516251 34516326 . - . Parent=GSCOCT00016363001 | |
| 22915 chr1 manual_curation exon 34516051 34516162 . - . Parent=GSCOCT00016363001 | |
| 22916 chr1 manual_curation exon 34515356 34515405 . - . Parent=GSCOCT00016363001 | |
| 22917 chr1 manual_curation exon 34515009 34515257 . - . Parent=GSCOCT00016363001 | |
| 22918 chr1 manual_curation exon 34514318 34514398 . - . Parent=GSCOCT00016363001 | |
| 22919 chr1 manual_curation exon 34513960 34514178 . - . Parent=GSCOCT00016363001 | |
| 22920 chr1 manual_curation exon 34513601 34513739 . - . Parent=GSCOCT00016363001 | |
| 22921 chr1 manual_curation exon 34513412 34513518 . - . Parent=GSCOCT00016363001 | |
| 22922 chr1 manual_curation exon 34513090 34513239 . - . Parent=GSCOCT00016363001 | |
| 22923 chr1 manual_curation exon 34512731 34512886 . - . Parent=GSCOCT00016363001 | |
| 22924 chr1 manual_curation exon 34512503 34512622 . - . Parent=GSCOCT00016363001 | |
| 22925 chr1 manual_curation exon 34512165 34512362 . - . Parent=GSCOCT00016363001 | |
| 22926 chr1 manual_curation exon 34510371 34511137 . - . Parent=GSCOCT00016363001 | |
| 22927 chr1 manual_curation CDS 34517752 34517783 . - 0 Parent=GSCOCT00016363001 | |
| 22928 chr1 manual_curation CDS 34517174 34517271 . - 2 Parent=GSCOCT00016363001 | |
| 22929 chr1 manual_curation CDS 34516850 34516959 . - 1 Parent=GSCOCT00016363001 | |
| 22930 chr1 manual_curation CDS 34516434 34516729 . - 0 Parent=GSCOCT00016363001 | |
| 22931 chr1 manual_curation CDS 34516251 34516326 . - 2 Parent=GSCOCT00016363001 | |
| 22932 chr1 manual_curation CDS 34516051 34516162 . - 0 Parent=GSCOCT00016363001 | |
| 22933 chr1 manual_curation CDS 34515356 34515405 . - 1 Parent=GSCOCT00016363001 | |
| 22934 chr1 manual_curation CDS 34515009 34515257 . - 0 Parent=GSCOCT00016363001 | |
| 22935 chr1 manual_curation CDS 34514318 34514398 . - 0 Parent=GSCOCT00016363001 | |
| 22936 chr1 manual_curation CDS 34513960 34514178 . - 0 Parent=GSCOCT00016363001 | |
| 22937 chr1 manual_curation CDS 34513601 34513739 . - 0 Parent=GSCOCT00016363001 | |
| 22938 chr1 manual_curation CDS 34513412 34513518 . - 1 Parent=GSCOCT00016363001 | |
| 22939 chr1 manual_curation CDS 34513090 34513239 . - 0 Parent=GSCOCT00016363001 | |
| 22940 chr1 manual_curation CDS 34512731 34512886 . - 0 Parent=GSCOCT00016363001 | |
| 22941 chr1 manual_curation CDS 34512503 34512622 . - 0 Parent=GSCOCT00016363001 | |
| 22942 chr1 manual_curation CDS 34512165 34512362 . - 0 Parent=GSCOCT00016363001 | |
| 22943 chr1 manual_curation CDS 34510994 34511137 . - 0 Parent=GSCOCT00016363001 | |
| 22944 chr1 manual_curation gene 34521783 34524907 . + . ID=GSCOCG00016362001;Name=Cc01_g17110 | |
| 22945 chr1 manual_curation mRNA 34521783 34524907 . + . ID=GSCOCT00016362001;Parent=GSCOCG00016362001;Name=Cc01_g17110 | |
| 22946 chr1 manual_curation polypeptide 34522563 34524653 . + . ID=GSCOCP00016362001;Dbxref=InterPro:IPR008580,PFAM:PF05903,SwissProt:Q4KM30,SwissProt:Q6GLM5,SwissProt:Q6ICB0,TAIR:AT2G25190.1,TAIR:AT3G07090.1,TrEMBL:C6THR3,TrEMBL:F6I015,TrEMBL:I1N297;Derives_from=GSCOCT00016362001;Name=Cc01_g17110;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Desumoylating isopeptidase 1,CC_functional_completeness:modules,CC_gene:pppde2,CC_gene:PPPDE2,CC_gene:Pppde2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016362001~ Putative Desumoylating isopeptidase 1~ pppde2~ modules;original_location=complement(join(2728620..2728628%2C2728394..2728491%2C2727566..2727882%2C2726538..2726956));owner=coffea | |
| 22947 chr1 manual_curation exon 34521783 34521885 . + . Parent=GSCOCT00016362001 | |
| 22948 chr1 manual_curation exon 34524235 34524907 . + . Parent=GSCOCT00016362001 | |
| 22949 chr1 manual_curation exon 34523309 34523625 . + . Parent=GSCOCT00016362001 | |
| 22950 chr1 manual_curation exon 34522700 34522797 . + . Parent=GSCOCT00016362001 | |
| 22951 chr1 manual_curation exon 34522503 34522571 . + . Parent=GSCOCT00016362001 | |
| 22952 chr1 manual_curation CDS 34524235 34524653 . + 1 Parent=GSCOCT00016362001 | |
| 22953 chr1 manual_curation CDS 34523309 34523625 . + 2 Parent=GSCOCT00016362001 | |
| 22954 chr1 manual_curation CDS 34522700 34522797 . + 0 Parent=GSCOCT00016362001 | |
| 22955 chr1 manual_curation CDS 34522563 34522571 . + 0 Parent=GSCOCT00016362001 | |
| 22956 chr1 manual_curation gene 34525636 34529649 . - . ID=GSCOCG00016361001;Name=Cc01_g17120 | |
| 22957 chr1 manual_curation mRNA 34525636 34529649 . - . ID=GSCOCT00016361001;Parent=GSCOCG00016361001;Name=Cc01_g17120 | |
| 22958 chr1 manual_curation polypeptide 34526181 34528882 . - . ID=GSCOCP00016361001;Dbxref=SwissProt:Q03730,SwissProt:Q5R6J3,SwissProt:Q8WV83,TAIR:AT3G07080.1,TAIR:AT4G32140.1,TrEMBL:C6TIF4,TrEMBL:F6I017,TrEMBL:I1KZA3;Derives_from=GSCOCT00016361001;Name=Cc01_g17120;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Solute carrier family 35 member F5,CC_functional_completeness:fragment,CC_gene:SLC35F5,CC_gene:YML018C;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016361001~ Putative Solute carrier family 35 member F5~ SLC35F5~ fragment;original_location=join(2722309..2722824%2C2722977..2723400%2C2724718..2725010);owner=coffea | |
| 22959 chr1 manual_curation exon 34529397 34529649 . - . Parent=GSCOCT00016361001 | |
| 22960 chr1 manual_curation exon 34528367 34529026 . - . Parent=GSCOCT00016361001 | |
| 22961 chr1 manual_curation exon 34527791 34528214 . - . Parent=GSCOCT00016361001 | |
| 22962 chr1 manual_curation exon 34525636 34526473 . - . Parent=GSCOCT00016361001 | |
| 22963 chr1 manual_curation CDS 34528367 34528882 . - 0 Parent=GSCOCT00016361001 | |
| 22964 chr1 manual_curation CDS 34527791 34528214 . - 0 Parent=GSCOCT00016361001 | |
| 22965 chr1 manual_curation CDS 34526181 34526473 . - 1 Parent=GSCOCT00016361001 | |
| 22966 chr1 manual_curation gene 34530567 34533930 . - . ID=GSCOCG00016360001;Name=Cc01_g17130 | |
| 22967 chr1 manual_curation mRNA 34530567 34533930 . - . ID=GSCOCT00016360001;Parent=GSCOCG00016360001;Name=Cc01_g17130 | |
| 22968 chr1 manual_curation polypeptide 34530782 34533819 . - . ID=GSCOCP00016360001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q9FE20,SwissProt:Q9LQQ8,SwissProt:Q9SFT7,TAIR:AT3G07070.1,TAIR:AT3G24790.1,TAIR:AT5G18610.1,TrEMBL:B9S537,TrEMBL:G7L297,TrEMBL:I1N2A9;Derives_from=GSCOCT00016360001;Name=Cc01_g17130;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Serine/threonine-protein kinase At3g07070,CC_functional_completeness:complete,CC_gene:At3g07070,CC_gene:PBS1,CC_gene:At1g07870;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016360001~ Serine/threonine-protein kinase At3g07070~ At3g07070~ complete;original_location=join(2717372..2717521%2C2717559..2717589%2C2717793..2717986%2C2718071..2718260%2C2719139..2719530%2C2720038..2720409);owner=coffea | |
| 22969 chr1 manual_curation exon 34533670 34533930 . - . Parent=GSCOCT00016360001 | |
| 22970 chr1 manual_curation exon 34533602 34533632 . - . Parent=GSCOCT00016360001 | |
| 22971 chr1 manual_curation exon 34533205 34533398 . - . Parent=GSCOCT00016360001 | |
| 22972 chr1 manual_curation exon 34532931 34533120 . - . Parent=GSCOCT00016360001 | |
| 22973 chr1 manual_curation exon 34531661 34532052 . - . Parent=GSCOCT00016360001 | |
| 22974 chr1 manual_curation exon 34530567 34531153 . - . Parent=GSCOCT00016360001 | |
| 22975 chr1 manual_curation CDS 34533670 34533819 . - 0 Parent=GSCOCT00016360001 | |
| 22976 chr1 manual_curation CDS 34533602 34533632 . - 0 Parent=GSCOCT00016360001 | |
| 22977 chr1 manual_curation CDS 34533205 34533398 . - 1 Parent=GSCOCT00016360001 | |
| 22978 chr1 manual_curation CDS 34532931 34533120 . - 0 Parent=GSCOCT00016360001 | |
| 22979 chr1 manual_curation CDS 34531661 34532052 . - 1 Parent=GSCOCT00016360001 | |
| 22980 chr1 manual_curation CDS 34530782 34531153 . - 0 Parent=GSCOCT00016360001 | |
| 22981 chr1 manual_curation gene 34535279 34536004 . - . ID=GSCOCG00016359001;Name=Cc01_g17140 | |
| 22982 chr1 manual_curation mRNA 34535279 34536004 . - . ID=GSCOCT00016359001;Parent=GSCOCG00016359001;Name=Cc01_g17140 | |
| 22983 chr1 manual_curation polypeptide 34535498 34536004 . - . ID=GSCOCP00016359001;Dbxref=GENE3D:G3DSA:2.60.40.420,InterPro:IPR003245,InterPro:IPR008972,PFAM:PF02298,PRODOM:PD003122,SUPERFAMILY:SSF49503,SwissProt:P00303,SwissProt:P60496,SwissProt:Q8LG89,TAIR:AT1G17800.1,TAIR:AT2G02850.1,TAIR:AT5G26330.1,TrEMBL:B9GNJ7,TrEMBL:D7U3K4,TrEMBL:F4YAW5;Derives_from=GSCOCT00016359001;Name=Cc01_g17140;Ontology_term=CC_evidence_code:ISS,GO:0005507,GO:0009055,CC_EC_number:missing_EC_number,PRODUCT:Putative Basic blue protein,CC_functional_completeness:complete,CC_gene:ARPN;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016359001~ Putative Basic blue protein~ ARPN~ complete;original_location=join(2715187..2715376%2C2715494..2715693);owner=coffea | |
| 22984 chr1 manual_curation exon 34535815 34536004 . - . Parent=GSCOCT00016359001 | |
| 22985 chr1 manual_curation exon 34535279 34535697 . - . Parent=GSCOCT00016359001 | |
| 22986 chr1 manual_curation CDS 34535815 34536004 . - 0 Parent=GSCOCT00016359001 | |
| 22987 chr1 manual_curation CDS 34535498 34535697 . - 1 Parent=GSCOCT00016359001 | |
| 22988 chr1 manual_curation gene 34537589 34539816 . - . ID=GSCOCG00016358001;Name=Cc01_g17150 | |
| 22989 chr1 manual_curation mRNA 34537589 34539816 . - . ID=GSCOCT00016358001;Parent=GSCOCG00016358001;Name=Cc01_g17150 | |
| 22990 chr1 manual_curation polypeptide 34537589 34539682 . - . ID=GSCOCP00016358001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q7Y211,SwissProt:Q9LUJ2,SwissProt:Q9SIT7,TAIR:AT2G13600.1,TAIR:AT3G22690.1,TAIR:AT3G57430.1,TIGRFAMs:TIGR00756,TrEMBL:B9T6B8,TrEMBL:F6HXG6,TrEMBL:Q5W965;Derives_from=GSCOCT00016358001;Name=Cc01_g17150;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Pentatricopeptide repeat-containing protein At2g13600,CC_functional_completeness:complete,CC_gene:PCMP-E76,CC_gene:PCMP-H56,CC_gene:PCMP-H81;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016358001~ Putative Pentatricopeptide repeat-containing protein At2g13600~ PCMP-E76~ complete;original_location=2711509..2713602;owner=coffea | |
| 22991 chr1 manual_curation exon 34537589 34539816 . - . Parent=GSCOCT00016358001 | |
| 22992 chr1 manual_curation CDS 34537589 34539682 . - 0 Parent=GSCOCT00016358001 | |
| 22993 chr1 manual_curation gene 34540483 34546749 . - . ID=GSCOCG00016357001;Name=Cc01_g17160 | |
| 22994 chr1 manual_curation mRNA 34540483 34546749 . - . ID=GSCOCT00016357001;Parent=GSCOCG00016357001;Name=Cc01_g17160 | |
| 22995 chr1 manual_curation polypeptide 34540791 34546749 . - . ID=GSCOCP00016357001;Dbxref=GENE3D:G3DSA:2.120.10.30,InterPro:IPR001258,InterPro:IPR011042,PFAM:PF01436,TAIR:AT1G56500.1,TAIR:AT3G07060.1,TrEMBL:B9S538,TrEMBL:D7L627,TrEMBL:F6I018;Derives_from=GSCOCT00016357001;Name=Cc01_g17160;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative NHL domain-containing protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016357001~ Putative NHL domain-containing protein~ unknown_gene~ fragment;original_location=join(2704442..2704495%2C2705283..2705376%2C2706264..2706404%2C2707050..2707150%2C2707339..2707452%2C2707647..2707870%2C2708536..2708594%2C2708670..2708855%2C2708931..2709054%2C2709129..2709187%2C2709450..2709595%2C2709735..2709899%2C2710104..2710400);owner=coffea | |
| 22996 chr1 manual_curation exon 34546696 34546749 . - . Parent=GSCOCT00016357001 | |
| 22997 chr1 manual_curation exon 34545815 34545908 . - . Parent=GSCOCT00016357001 | |
| 22998 chr1 manual_curation exon 34544787 34544927 . - . Parent=GSCOCT00016357001 | |
| 22999 chr1 manual_curation exon 34544041 34544141 . - . Parent=GSCOCT00016357001 | |
| 23000 chr1 manual_curation exon 34543739 34543852 . - . Parent=GSCOCT00016357001 | |
| 23001 chr1 manual_curation exon 34543321 34543544 . - . Parent=GSCOCT00016357001 | |
| 23002 chr1 manual_curation exon 34542597 34542655 . - . Parent=GSCOCT00016357001 | |
| 23003 chr1 manual_curation exon 34542336 34542521 . - . Parent=GSCOCT00016357001 | |
| 23004 chr1 manual_curation exon 34542137 34542260 . - . Parent=GSCOCT00016357001 | |
| 23005 chr1 manual_curation exon 34542004 34542062 . - . Parent=GSCOCT00016357001 | |
| 23006 chr1 manual_curation exon 34541596 34541741 . - . Parent=GSCOCT00016357001 | |
| 23007 chr1 manual_curation exon 34541292 34541456 . - . Parent=GSCOCT00016357001 | |
| 23008 chr1 manual_curation exon 34540483 34541087 . - . Parent=GSCOCT00016357001 | |
| 23009 chr1 manual_curation CDS 34546696 34546749 . - 0 Parent=GSCOCT00016357001 | |
| 23010 chr1 manual_curation CDS 34545815 34545908 . - 0 Parent=GSCOCT00016357001 | |
| 23011 chr1 manual_curation CDS 34544787 34544927 . - 1 Parent=GSCOCT00016357001 | |
| 23012 chr1 manual_curation CDS 34544041 34544141 . - 1 Parent=GSCOCT00016357001 | |
| 23013 chr1 manual_curation CDS 34543739 34543852 . - 0 Parent=GSCOCT00016357001 | |
| 23014 chr1 manual_curation CDS 34543321 34543544 . - 0 Parent=GSCOCT00016357001 | |
| 23015 chr1 manual_curation CDS 34542597 34542655 . - 2 Parent=GSCOCT00016357001 | |
| 23016 chr1 manual_curation CDS 34542336 34542521 . - 1 Parent=GSCOCT00016357001 | |
| 23017 chr1 manual_curation CDS 34542137 34542260 . - 1 Parent=GSCOCT00016357001 | |
| 23018 chr1 manual_curation CDS 34542004 34542062 . - 2 Parent=GSCOCT00016357001 | |
| 23019 chr1 manual_curation CDS 34541596 34541741 . - 1 Parent=GSCOCT00016357001 | |
| 23020 chr1 manual_curation CDS 34541292 34541456 . - 0 Parent=GSCOCT00016357001 | |
| 23021 chr1 manual_curation CDS 34540791 34541087 . - 0 Parent=GSCOCT00016357001 | |
| 23022 chr1 manual_curation gene 34548200 34548787 . - . ID=GSCOCG00016356001;Name=Cc01_g17170 | |
| 23023 chr1 manual_curation mRNA 34548200 34548787 . - . ID=GSCOCT00016356001;Parent=GSCOCG00016356001;Name=Cc01_g17170 | |
| 23024 chr1 manual_curation polypeptide 34548200 34548787 . - . ID=GSCOCP00016356001;Derives_from=GSCOCT00016356001;Name=Cc01_g17170;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016356001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(2702404..2702755%2C2702858..2702991);owner=coffea | |
| 23025 chr1 manual_curation exon 34548436 34548787 . - . Parent=GSCOCT00016356001 | |
| 23026 chr1 manual_curation exon 34548200 34548333 . - . Parent=GSCOCT00016356001 | |
| 23027 chr1 manual_curation CDS 34548436 34548787 . - 0 Parent=GSCOCT00016356001 | |
| 23028 chr1 manual_curation CDS 34548200 34548333 . - 1 Parent=GSCOCT00016356001 | |
| 23029 chr1 manual_curation gene 34550738 34552666 . - . ID=GSCOCG00016355001;Name=Cc01_g17180 | |
| 23030 chr1 manual_curation mRNA 34550738 34552666 . - . ID=GSCOCT00016355001;Parent=GSCOCG00016355001;Name=Cc01_g17180 | |
| 23031 chr1 manual_curation polypeptide 34552140 34552529 . - . ID=GSCOCP00016355001;Dbxref=SwissProt:A1EC31,TrEMBL:D7U3I3;Derives_from=GSCOCT00016355001;Name=Cc01_g17180;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative CLAVATA3/ESR (CLE)-related protein TDIF,CC_functional_completeness:complete,CC_gene:TDIF;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016355001~ Putative CLAVATA3/ESR (CLE)-related protein TDIF~ TDIF~ complete;original_location=2698662..2699051;owner=coffea | |
| 23032 chr1 manual_curation exon 34550738 34552666 . - . Parent=GSCOCT00016355001 | |
| 23033 chr1 manual_curation CDS 34552140 34552529 . - 0 Parent=GSCOCT00016355001 | |
| 23034 chr1 manual_curation gene 34559241 34565753 . - . ID=GSCOCG00016354001;Name=Cc01_g17190 | |
| 23035 chr1 manual_curation mRNA 34559241 34565753 . - . ID=GSCOCT00016354001;Parent=GSCOCG00016354001;Name=Cc01_g17190 | |
| 23036 chr1 manual_curation polypeptide 34559683 34565180 . - . ID=GSCOCP00016354001;Dbxref=InterPro:IPR022552,PFAM:PF12452,TAIR:AT5G48830.2,TrEMBL:B9GNJ5,TrEMBL:B9S540,TrEMBL:D7U3I2;Derives_from=GSCOCT00016354001;Name=Cc01_g17190;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016354001~ Putative unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages.~ unknown_gene~ complete;original_location=join(2686011..2686117%2C2686347..2686661%2C2686782..2687013%2C2687662..2687796%2C2687879..2688003%2C2688583..2688787%2C2689739..2689992%2C2691340..2691508);owner=coffea | |
| 23037 chr1 manual_curation exon 34565554 34565753 . - . Parent=GSCOCT00016354001 | |
| 23038 chr1 manual_curation exon 34565074 34565254 . - . Parent=GSCOCT00016354001 | |
| 23039 chr1 manual_curation exon 34564530 34564844 . - . Parent=GSCOCT00016354001 | |
| 23040 chr1 manual_curation exon 34564178 34564409 . - . Parent=GSCOCT00016354001 | |
| 23041 chr1 manual_curation exon 34563395 34563529 . - . Parent=GSCOCT00016354001 | |
| 23042 chr1 manual_curation exon 34563188 34563312 . - . Parent=GSCOCT00016354001 | |
| 23043 chr1 manual_curation exon 34562404 34562608 . - . Parent=GSCOCT00016354001 | |
| 23044 chr1 manual_curation exon 34561199 34561452 . - . Parent=GSCOCT00016354001 | |
| 23045 chr1 manual_curation exon 34559241 34559851 . - . Parent=GSCOCT00016354001 | |
| 23046 chr1 manual_curation CDS 34565074 34565180 . - 0 Parent=GSCOCT00016354001 | |
| 23047 chr1 manual_curation CDS 34564530 34564844 . - 2 Parent=GSCOCT00016354001 | |
| 23048 chr1 manual_curation CDS 34564178 34564409 . - 2 Parent=GSCOCT00016354001 | |
| 23049 chr1 manual_curation CDS 34563395 34563529 . - 0 Parent=GSCOCT00016354001 | |
| 23050 chr1 manual_curation CDS 34563188 34563312 . - 0 Parent=GSCOCT00016354001 | |
| 23051 chr1 manual_curation CDS 34562404 34562608 . - 2 Parent=GSCOCT00016354001 | |
| 23052 chr1 manual_curation CDS 34561199 34561452 . - 0 Parent=GSCOCT00016354001 | |
| 23053 chr1 manual_curation CDS 34559683 34559851 . - 2 Parent=GSCOCT00016354001 | |
| 23054 chr1 manual_curation gene 34570578 34574658 . + . ID=GSCOCG00016353001;Name=Cc01_g17200 | |
| 23055 chr1 manual_curation mRNA 34570578 34574658 . + . ID=GSCOCT00016353001;Parent=GSCOCG00016353001;Name=Cc01_g17200 | |
| 23056 chr1 manual_curation polypeptide 34570759 34574419 . + . ID=GSCOCP00016353001;Dbxref=InterPro:IPR002917,InterPro:IPR006073,InterPro:IPR014813,PFAM:PF01926,PFAM:PF08701,PRINTS:PR00326,SwissProt:Q21086,SwissProt:Q54KS4,SwissProt:Q8MT06,TAIR:AT1G52980.1,TAIR:AT2G27200.1,TAIR:AT3G07050.1,TrEMBL:A1X875,TrEMBL:A5AJL5,TrEMBL:D7U3G4;Derives_from=GSCOCT00016353001;Name=Cc01_g17200;Ontology_term=CC_evidence_code:ISS,GO:0005525,GO:0005622,CC_EC_number:missing_EC_number,PRODUCT:Putative Guanine nucleotide-binding protein-like 3 homolog,CC_functional_completeness:modules,CC_gene:gnl3,CC_gene:nst-1,CC_gene:ns1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016353001~ Putative Guanine nucleotide-binding protein-like 3 homolog~ gnl3~ modules;original_location=complement(join(2680414..2680432%2C2680060..2680304%2C2679551..2679665%2C2679280..2679453%2C2678816..2679033%2C2678328..2678595%2C2678049..2678228%2C2677687..2677898%2C2676772..2677137));owner=coffea | |
| 23057 chr1 manual_curation exon 34574054 34574658 . + . Parent=GSCOCT00016353001 | |
| 23058 chr1 manual_curation exon 34573293 34573504 . + . Parent=GSCOCT00016353001 | |
| 23059 chr1 manual_curation exon 34572963 34573142 . + . Parent=GSCOCT00016353001 | |
| 23060 chr1 manual_curation exon 34572596 34572863 . + . Parent=GSCOCT00016353001 | |
| 23061 chr1 manual_curation exon 34572158 34572375 . + . Parent=GSCOCT00016353001 | |
| 23062 chr1 manual_curation exon 34571738 34571911 . + . Parent=GSCOCT00016353001 | |
| 23063 chr1 manual_curation exon 34571526 34571640 . + . Parent=GSCOCT00016353001 | |
| 23064 chr1 manual_curation exon 34570887 34571131 . + . Parent=GSCOCT00016353001 | |
| 23065 chr1 manual_curation exon 34570578 34570777 . + . Parent=GSCOCT00016353001 | |
| 23066 chr1 manual_curation CDS 34574054 34574419 . + 0 Parent=GSCOCT00016353001 | |
| 23067 chr1 manual_curation CDS 34573293 34573504 . + 1 Parent=GSCOCT00016353001 | |
| 23068 chr1 manual_curation CDS 34572963 34573142 . + 1 Parent=GSCOCT00016353001 | |
| 23069 chr1 manual_curation CDS 34572596 34572863 . + 0 Parent=GSCOCT00016353001 | |
| 23070 chr1 manual_curation CDS 34572158 34572375 . + 1 Parent=GSCOCT00016353001 | |
| 23071 chr1 manual_curation CDS 34571738 34571911 . + 1 Parent=GSCOCT00016353001 | |
| 23072 chr1 manual_curation CDS 34571526 34571640 . + 0 Parent=GSCOCT00016353001 | |
| 23073 chr1 manual_curation CDS 34570887 34571131 . + 1 Parent=GSCOCT00016353001 | |
| 23074 chr1 manual_curation CDS 34570759 34570777 . + 0 Parent=GSCOCT00016353001 | |
| 23075 chr1 manual_curation gene 34577337 34580756 . + . ID=GSCOCG00016352001;Name=Cc01_g17210 | |
| 23076 chr1 manual_curation mRNA 34577337 34580756 . + . ID=GSCOCT00016352001;Parent=GSCOCG00016352001;Name=Cc01_g17210 | |
| 23077 chr1 manual_curation polypeptide 34577540 34580426 . + . ID=GSCOCP00016352001;Dbxref=InterPro:IPR001388,InterPro:IPR010908,InterPro:IPR011012,PFAM:PF00957,PRINTS:PR00219,PROFILE:PS50859,PROFILE:PS50892,PROSITE:PS00417,SUPERFAMILY:SSF64356,SwissProt:O48850,SwissProt:Q9MAS5,SwissProt:Q9ZTW3,TAIR:AT1G04750.1,TAIR:AT1G04760.1,TAIR:AT2G32670.1,TrEMBL:A9NNA8,TrEMBL:D7U3G1,TrEMBL:I1LAI4;Derives_from=GSCOCT00016352001;Name=Cc01_g17210;Ontology_term=CC_evidence_code:ISS,GO:0006810,GO:0016021,GO:0016192,CC_EC_number:missing_EC_number,PRODUCT:Putative vesicle-associated membrane protein 726,CC_functional_completeness:complete,CC_gene:VAMP726,CC_gene:VAMP725,CC_gene:VAMP721;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016352001~ Putative vesicle-associated membrane protein 726~ VAMP726~ complete;original_location=complement(join(2673462..2673651%2C2671511..2671652%2C2671277..2671397%2C2671106..2671168%2C2670765..2670911));owner=coffea | |
| 23078 chr1 manual_curation exon 34580280 34580756 . + . Parent=GSCOCT00016352001 | |
| 23079 chr1 manual_curation exon 34580023 34580085 . + . Parent=GSCOCT00016352001 | |
| 23080 chr1 manual_curation exon 34579794 34579914 . + . Parent=GSCOCT00016352001 | |
| 23081 chr1 manual_curation exon 34579539 34579680 . + . Parent=GSCOCT00016352001 | |
| 23082 chr1 manual_curation exon 34577337 34577729 . + . Parent=GSCOCT00016352001 | |
| 23083 chr1 manual_curation CDS 34580280 34580426 . + 0 Parent=GSCOCT00016352001 | |
| 23084 chr1 manual_curation CDS 34580023 34580085 . + 0 Parent=GSCOCT00016352001 | |
| 23085 chr1 manual_curation CDS 34579794 34579914 . + 2 Parent=GSCOCT00016352001 | |
| 23086 chr1 manual_curation CDS 34579539 34579680 . + 1 Parent=GSCOCT00016352001 | |
| 23087 chr1 manual_curation CDS 34577540 34577729 . + 0 Parent=GSCOCT00016352001 | |
| 23088 chr1 manual_curation gene 34581363 34584220 . - . ID=GSCOCG00016351001;Name=Cc01_g17220 | |
| 23089 chr1 manual_curation mRNA 34581363 34584220 . - . ID=GSCOCT00016351001;Parent=GSCOCG00016351001;Name=Cc01_g17220 | |
| 23090 chr1 manual_curation polypeptide 34581621 34583882 . - . ID=GSCOCP00016351001;Dbxref=GENE3D:G3DSA:3.40.50.620,HAMAP:MF_00158,InterPro:IPR003721,InterPro:IPR014729,PANTHER:PTHR21299:SF1,PFAM:PF02569,SwissProt:O24035,SwissProt:O24210,SwissProt:Q9FKB3,TAIR:AT5G48840.1,TIGRFAMs:TIGR00018,TrEMBL:B9GNJ0,TrEMBL:B9S544,TrEMBL:F6HZY6;Derives_from=GSCOCT00016351001;Name=Cc01_g17220;Ontology_term=CC_evidence_code:ISS,GO:0004592,GO:0015940,CC_EC_number:6.3.2.1,PRODUCT:Pantoate--beta-alanine ligase,CC_functional_completeness:complete,CC_gene:PANC,CC_gene:At5g48840;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016351001~ Pantoate--beta-alanine ligase~ PANC~ complete;original_location=join(2667309..2667908%2C2668122..2668235%2C2668492..2668623%2C2669454..2669570);owner=coffea | |
| 23091 chr1 manual_curation exon 34583283 34584220 . - . Parent=GSCOCT00016351001 | |
| 23092 chr1 manual_curation exon 34582956 34583069 . - . Parent=GSCOCT00016351001 | |
| 23093 chr1 manual_curation exon 34582568 34582699 . - . Parent=GSCOCT00016351001 | |
| 23094 chr1 manual_curation exon 34581363 34581737 . - . Parent=GSCOCT00016351001 | |
| 23095 chr1 manual_curation CDS 34583283 34583882 . - 0 Parent=GSCOCT00016351001 | |
| 23096 chr1 manual_curation CDS 34582956 34583069 . - 0 Parent=GSCOCT00016351001 | |
| 23097 chr1 manual_curation CDS 34582568 34582699 . - 0 Parent=GSCOCT00016351001 | |
| 23098 chr1 manual_curation CDS 34581621 34581737 . - 0 Parent=GSCOCT00016351001 | |
| 23099 chr1 manual_curation gene 34585159 34588000 . - . ID=GSCOCG00016350001;Name=Cc01_g17230 | |
| 23100 chr1 manual_curation mRNA 34585159 34588000 . - . ID=GSCOCT00016350001;Parent=GSCOCG00016350001;Name=Cc01_g17230 | |
| 23101 chr1 manual_curation polypeptide 34585497 34587722 . - . ID=GSCOCP00016350001;Dbxref=GENE3D:G3DSA:1.25.40.10,InterPro:IPR011990,TAIR:AT1G04770.1,TAIR:AT3G51280.1,TAIR:AT5G48850.1,TrEMBL:A5BLL8,TrEMBL:B9GNI9,TrEMBL:D7U3F6;Derives_from=GSCOCT00016350001;Name=Cc01_g17230;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:Tetratricopeptide repeat (TPR)-like superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016350001~ Tetratricopeptide repeat (TPR)-like superfamily protein~ unknown_gene~ complete;original_location=join(2663469..2663579%2C2664519..2664731%2C2664988..2665143%2C2665290..2665694);owner=coffea | |
| 23102 chr1 manual_curation exon 34587612 34588000 . - . Parent=GSCOCT00016350001 | |
| 23103 chr1 manual_curation exon 34586460 34586672 . - . Parent=GSCOCT00016350001 | |
| 23104 chr1 manual_curation exon 34586048 34586203 . - . Parent=GSCOCT00016350001 | |
| 23105 chr1 manual_curation exon 34585159 34585901 . - . Parent=GSCOCT00016350001 | |
| 23106 chr1 manual_curation CDS 34587612 34587722 . - 0 Parent=GSCOCT00016350001 | |
| 23107 chr1 manual_curation CDS 34586460 34586672 . - 0 Parent=GSCOCT00016350001 | |
| 23108 chr1 manual_curation CDS 34586048 34586203 . - 0 Parent=GSCOCT00016350001 | |
| 23109 chr1 manual_curation CDS 34585497 34585901 . - 0 Parent=GSCOCT00016350001 | |
| 23110 chr1 manual_curation gene 34589588 34593033 . - . ID=GSCOCG00016349001;Name=Cc01_g17240 | |
| 23111 chr1 manual_curation mRNA 34589588 34593033 . - . ID=GSCOCT00016349001;Parent=GSCOCG00016349001;Name=Cc01_g17240 | |
| 23112 chr1 manual_curation polypeptide 34589851 34592730 . - . ID=GSCOCP00016349001;Dbxref=InterPro:IPR002775,PFAM:PF01918,SwissProt:Q8N5L8,SwissProt:Q99JH1,TAIR:AT1G20220.1,TAIR:AT1G76010.1,TAIR:AT3G07030.1,TrEMBL:B9S547,TrEMBL:D7U3F5,TrEMBL:G7L2B5;Derives_from=GSCOCT00016349001;Name=Cc01_g17240;Ontology_term=CC_evidence_code:ISS,GO:0003676,CC_EC_number:missing_EC_number,PRODUCT:Putative Ribonuclease P protein subunit p25-like protein,CC_functional_completeness:modules,CC_gene:RPP25L,CC_gene:Rpp25l;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016349001~ Putative Ribonuclease P protein subunit p25-like protein~ RPP25L~ modules;original_location=join(2658461..2658583%2C2659922..2660002%2C2660114..2660202%2C2660325..2660399%2C2660665..2660771%2C2660860..2660937%2C2661020..2661085%2C2661234..2661340);owner=coffea | |
| 23113 chr1 manual_curation exon 34592608 34593033 . - . Parent=GSCOCT00016349001 | |
| 23114 chr1 manual_curation exon 34591189 34591269 . - . Parent=GSCOCT00016349001 | |
| 23115 chr1 manual_curation exon 34590989 34591077 . - . Parent=GSCOCT00016349001 | |
| 23116 chr1 manual_curation exon 34590792 34590866 . - . Parent=GSCOCT00016349001 | |
| 23117 chr1 manual_curation exon 34590420 34590526 . - . Parent=GSCOCT00016349001 | |
| 23118 chr1 manual_curation exon 34590254 34590331 . - . Parent=GSCOCT00016349001 | |
| 23119 chr1 manual_curation exon 34590106 34590171 . - . Parent=GSCOCT00016349001 | |
| 23120 chr1 manual_curation exon 34589588 34589957 . - . Parent=GSCOCT00016349001 | |
| 23121 chr1 manual_curation CDS 34592608 34592730 . - 0 Parent=GSCOCT00016349001 | |
| 23122 chr1 manual_curation CDS 34591189 34591269 . - 0 Parent=GSCOCT00016349001 | |
| 23123 chr1 manual_curation CDS 34590989 34591077 . - 0 Parent=GSCOCT00016349001 | |
| 23124 chr1 manual_curation CDS 34590792 34590866 . - 2 Parent=GSCOCT00016349001 | |
| 23125 chr1 manual_curation CDS 34590420 34590526 . - 2 Parent=GSCOCT00016349001 | |
| 23126 chr1 manual_curation CDS 34590254 34590331 . - 1 Parent=GSCOCT00016349001 | |
| 23127 chr1 manual_curation CDS 34590106 34590171 . - 1 Parent=GSCOCT00016349001 | |
| 23128 chr1 manual_curation CDS 34589851 34589957 . - 1 Parent=GSCOCT00016349001 | |
| 23129 chr1 manual_curation gene 34594447 34596569 . - . ID=GSCOCG00016348001;Name=Cc01_g17250 | |
| 23130 chr1 manual_curation mRNA 34594447 34596569 . - . ID=GSCOCT00016348001;Parent=GSCOCG00016348001;Name=Cc01_g17250 | |
| 23131 chr1 manual_curation polypeptide 34594761 34596213 . - . ID=GSCOCP00016348001;Dbxref=TAIR:AT3G24750.1,TrEMBL:B9S549,TrEMBL:F6HZY0,TrEMBL:I1KZB8;Derives_from=GSCOCT00016348001;Name=Cc01_g17250;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016348001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=join(2654978..2655080%2C2655184..2655671%2C2656008..2656281%2C2656411..2656430);owner=coffea | |
| 23132 chr1 manual_curation exon 34596111 34596569 . - . Parent=GSCOCT00016348001 | |
| 23133 chr1 manual_curation exon 34595520 34596007 . - . Parent=GSCOCT00016348001 | |
| 23134 chr1 manual_curation exon 34594910 34595183 . - . Parent=GSCOCT00016348001 | |
| 23135 chr1 manual_curation exon 34594447 34594780 . - . Parent=GSCOCT00016348001 | |
| 23136 chr1 manual_curation CDS 34596111 34596213 . - 0 Parent=GSCOCT00016348001 | |
| 23137 chr1 manual_curation CDS 34595520 34596007 . - 1 Parent=GSCOCT00016348001 | |
| 23138 chr1 manual_curation CDS 34594910 34595183 . - 0 Parent=GSCOCT00016348001 | |
| 23139 chr1 manual_curation CDS 34594761 34594780 . - 1 Parent=GSCOCT00016348001 | |
| 23140 chr1 manual_curation gene 34597670 34601890 . - . ID=GSCOCG00016347001;Name=Cc01_g17260 | |
| 23141 chr1 manual_curation mRNA 34597670 34601890 . - . ID=GSCOCT00016347001;Parent=GSCOCG00016347001;Name=Cc01_g17260 | |
| 23142 chr1 manual_curation polypeptide 34599120 34601662 . - . ID=GSCOCP00016347001;Dbxref=InterPro:IPR001163,InterPro:IPR006649,InterPro:IPR010920,PFAM:PF01423,SMART:SM00651,SUPERFAMILY:SSF50182,SwissProt:P62322,SwissProt:Q5R628,SwissProt:Q9Y4Y9,TAIR:AT5G48870.1,TrEMBL:A9PC96,TrEMBL:C6SZ20,TrEMBL:D7TS90;Derives_from=GSCOCT00016347001;Name=Cc01_g17260;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:U6 snRNA-associated Sm-like protein LSm5,CC_functional_completeness:complete,CC_gene:LSM5,CC_gene:Lsm5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016347001~ U6 snRNA-associated Sm-like protein LSm5~ LSM5~ complete;original_location=join(2649529..2649562%2C2649690..2649813%2C2651665..2651737%2C2652039..2652071);owner=coffea | |
| 23143 chr1 manual_curation exon 34601629 34601890 . - . Parent=GSCOCT00016347001 | |
| 23144 chr1 manual_curation exon 34601378 34601501 . - . Parent=GSCOCT00016347001 | |
| 23145 chr1 manual_curation exon 34599454 34599526 . - . Parent=GSCOCT00016347001 | |
| 23146 chr1 manual_curation exon 34597670 34599152 . - . Parent=GSCOCT00016347001 | |
| 23147 chr1 manual_curation CDS 34601629 34601662 . - 0 Parent=GSCOCT00016347001 | |
| 23148 chr1 manual_curation CDS 34601378 34601501 . - 1 Parent=GSCOCT00016347001 | |
| 23149 chr1 manual_curation CDS 34599454 34599526 . - 2 Parent=GSCOCT00016347001 | |
| 23150 chr1 manual_curation CDS 34599120 34599152 . - 0 Parent=GSCOCT00016347001 | |
| 23151 chr1 manual_curation gene 34602740 34606125 . + . ID=GSCOCG00016346001;Name=Cc01_g17270 | |
| 23152 chr1 manual_curation mRNA 34602740 34606125 . + . ID=GSCOCT00016346001;Parent=GSCOCG00016346001;Name=Cc01_g17270 | |
| 23153 chr1 manual_curation polypeptide 34604980 34606125 . + . ID=GSCOCP00016346001;Dbxref=InterPro:IPR012866,PFAM:PF07800,TAIR:AT1G68140.1,TAIR:AT3G24740.1,TAIR:AT3G25910.1,TrEMBL:B9S551,TrEMBL:D7L5S0,TrEMBL:F6HZY0;Derives_from=GSCOCT00016346001;Name=Cc01_g17270;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF1644),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016346001~ Protein of unknown function (DUF1644)~ unknown_gene~ complete;original_location=complement(2645066..2646211);owner=coffea | |
| 23154 chr1 manual_curation exon 34604146 34604389 . + . Parent=GSCOCT00016346001 | |
| 23155 chr1 manual_curation exon 34602740 34603195 . + . Parent=GSCOCT00016346001 | |
| 23156 chr1 manual_curation exon 34604971 34606125 . + . Parent=GSCOCT00016346001 | |
| 23157 chr1 manual_curation CDS 34604980 34606125 . + 0 Parent=GSCOCT00016346001 | |
| 23158 chr1 manual_curation gene 34607179 34612644 . - . ID=GSCOCG00016344001;Name=Cc01_g17280 | |
| 23159 chr1 manual_curation mRNA 34607179 34612644 . - . ID=GSCOCT00016344001;Parent=GSCOCG00016344001;Name=Cc01_g17280 | |
| 23160 chr1 manual_curation polypeptide 34607551 34612411 . - . ID=GSCOCP00016344001;Dbxref=GENE3D:G3DSA:3.40.47.10,InterPro:IPR002155,InterPro:IPR016038,InterPro:IPR016039,InterPro:IPR020610,InterPro:IPR020613,InterPro:IPR020615,InterPro:IPR020616,InterPro:IPR020617,PANTHER:PTHR18919,PFAM:PF00108,PFAM:PF02803,PROSITE:PS00098,PROSITE:PS00099,PROSITE:PS00737,SUPERFAMILY:SSF53901,SwissProt:Q56WD9,SwissProt:Q570C8,SwissProt:Q8LF48,TAIR:AT1G04710.1,TAIR:AT2G33150.1,TAIR:AT5G48880.2,TIGRFAMs:TIGR01930,TrEMBL:A5BXL8,TrEMBL:C8YNG6,TrEMBL:C8YNG7;Derives_from=GSCOCT00016344001;Name=Cc01_g17280;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,CC_EC_number:2.3.1.16,PRODUCT:3-ketoacyl-CoA thiolase 2%2C peroxisomal,CC_functional_completeness:complete,CC_gene:PED1,CC_gene:KAT5,CC_gene:KAT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016344001~ 3-ketoacyl-CoA thiolase 2%2C peroxisomal~ PED1~ complete;original_location=join(2638780..2638881%2C2639599..2639675%2C2639768..2639852%2C2640168..2640294%2C2640618..2640716%2C2640796..2640863%2C2640960..2641067%2C2641155..2641232%2C2641364..2641496%2C2641601..2641697%2C2642855..2642978%2C2643062..2643170%2C2643306..2643389%2C2643531..2643640);owner=coffea | |
| 23161 chr1 manual_curation exon 34612310 34612644 . - . Parent=GSCOCT00016344001 | |
| 23162 chr1 manual_curation exon 34611516 34611592 . - . Parent=GSCOCT00016344001 | |
| 23163 chr1 manual_curation exon 34611339 34611423 . - . Parent=GSCOCT00016344001 | |
| 23164 chr1 manual_curation exon 34610897 34611023 . - . Parent=GSCOCT00016344001 | |
| 23165 chr1 manual_curation exon 34610475 34610573 . - . Parent=GSCOCT00016344001 | |
| 23166 chr1 manual_curation exon 34610328 34610395 . - . Parent=GSCOCT00016344001 | |
| 23167 chr1 manual_curation exon 34610124 34610231 . - . Parent=GSCOCT00016344001 | |
| 23168 chr1 manual_curation exon 34609959 34610036 . - . Parent=GSCOCT00016344001 | |
| 23169 chr1 manual_curation exon 34609695 34609827 . - . Parent=GSCOCT00016344001 | |
| 23170 chr1 manual_curation exon 34609494 34609590 . - . Parent=GSCOCT00016344001 | |
| 23171 chr1 manual_curation exon 34608213 34608336 . - . Parent=GSCOCT00016344001 | |
| 23172 chr1 manual_curation exon 34608021 34608129 . - . Parent=GSCOCT00016344001 | |
| 23173 chr1 manual_curation exon 34607802 34607885 . - . Parent=GSCOCT00016344001 | |
| 23174 chr1 manual_curation exon 34607179 34607660 . - . Parent=GSCOCT00016344001 | |
| 23175 chr1 manual_curation CDS 34612310 34612411 . - 0 Parent=GSCOCT00016344001 | |
| 23176 chr1 manual_curation CDS 34611516 34611592 . - 0 Parent=GSCOCT00016344001 | |
| 23177 chr1 manual_curation CDS 34611339 34611423 . - 2 Parent=GSCOCT00016344001 | |
| 23178 chr1 manual_curation CDS 34610897 34611023 . - 0 Parent=GSCOCT00016344001 | |
| 23179 chr1 manual_curation CDS 34610475 34610573 . - 1 Parent=GSCOCT00016344001 | |
| 23180 chr1 manual_curation CDS 34610328 34610395 . - 1 Parent=GSCOCT00016344001 | |
| 23181 chr1 manual_curation CDS 34610124 34610231 . - 0 Parent=GSCOCT00016344001 | |
| 23182 chr1 manual_curation CDS 34609959 34610036 . - 0 Parent=GSCOCT00016344001 | |
| 23183 chr1 manual_curation CDS 34609695 34609827 . - 0 Parent=GSCOCT00016344001 | |
| 23184 chr1 manual_curation CDS 34609494 34609590 . - 1 Parent=GSCOCT00016344001 | |
| 23185 chr1 manual_curation CDS 34608213 34608336 . - 2 Parent=GSCOCT00016344001 | |
| 23186 chr1 manual_curation CDS 34608021 34608129 . - 0 Parent=GSCOCT00016344001 | |
| 23187 chr1 manual_curation CDS 34607802 34607885 . - 1 Parent=GSCOCT00016344001 | |
| 23188 chr1 manual_curation CDS 34607551 34607660 . - 1 Parent=GSCOCT00016344001 | |
| 23189 chr1 manual_curation gene 34615159 34616561 . - . ID=GSCOCG00016343001;Name=Cc01_g17290 | |
| 23190 chr1 manual_curation mRNA 34615159 34616561 . - . ID=GSCOCT00016343001;Parent=GSCOCG00016343001;Name=Cc01_g17290 | |
| 23191 chr1 manual_curation polypeptide 34615679 34615921 . - . ID=GSCOCP00016343001;Derives_from=GSCOCT00016343001;Name=Cc01_g17290;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016343001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=2635270..2635512;owner=coffea | |
| 23192 chr1 manual_curation exon 34615159 34616561 . - . Parent=GSCOCT00016343001 | |
| 23193 chr1 manual_curation CDS 34615679 34615921 . - 0 Parent=GSCOCT00016343001 | |
| 23194 chr1 manual_curation gene 34622197 34631708 . + . ID=GSCOCG00016342001;Name=Cc01_g17300 | |
| 23195 chr1 manual_curation mRNA 34622197 34631708 . + . ID=GSCOCT00016342001;Parent=GSCOCG00016342001;Name=Cc01_g17300 | |
| 23196 chr1 manual_curation polypeptide 34622487 34631406 . + . ID=GSCOCP00016342001;Dbxref=InterPro:IPR002213,InterPro:IPR004276,PANTHER:PTHR11926,PFAM:PF00201,PFAM:PF03033,SwissProt:P0CN90,SwissProt:P0CN91,SwissProt:Q54IL5,TAIR:AT1G43620.1,TAIR:AT3G07020.2,TAIR:AT5G24750.1,TrEMBL:B9S556,TrEMBL:D7U3F0,TrEMBL:Q8H9B4;Derives_from=GSCOCT00016342001;Name=Cc01_g17300;Ontology_term=CC_evidence_code:ISS,GO:0005975,GO:0008152,GO:0030259,CC_EC_number:2.4.1.173,PRODUCT:UDP-Glycosyltransferase superfamily protein,CC_functional_completeness:complete,CC_gene:ugt52,CC_gene:ATG26;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016342001~ UDP-Glycosyltransferase superfamily protein~ ugt52~ complete;original_location=complement(join(2628533..2628704%2C2628016..2628200%2C2625729..2625965%2C2624801..2624912%2C2623460..2623630%2C2623013..2623076%2C2622810..2622867%2C2622438..2622615%2C2622065..2622195%2C2621344..2621446%2C2621158..2621234%2C2620293..2620340%2C2620055..2620204%2C2619785..2619952));owner=coffea | |
| 23197 chr1 manual_curation exon 34631239 34631708 . + . Parent=GSCOCT00016342001 | |
| 23198 chr1 manual_curation exon 34630987 34631136 . + . Parent=GSCOCT00016342001 | |
| 23199 chr1 manual_curation exon 34630851 34630898 . + . Parent=GSCOCT00016342001 | |
| 23200 chr1 manual_curation exon 34629957 34630033 . + . Parent=GSCOCT00016342001 | |
| 23201 chr1 manual_curation exon 34629745 34629847 . + . Parent=GSCOCT00016342001 | |
| 23202 chr1 manual_curation exon 34628996 34629126 . + . Parent=GSCOCT00016342001 | |
| 23203 chr1 manual_curation exon 34628576 34628753 . + . Parent=GSCOCT00016342001 | |
| 23204 chr1 manual_curation exon 34628324 34628381 . + . Parent=GSCOCT00016342001 | |
| 23205 chr1 manual_curation exon 34628115 34628178 . + . Parent=GSCOCT00016342001 | |
| 23206 chr1 manual_curation exon 34627561 34627731 . + . Parent=GSCOCT00016342001 | |
| 23207 chr1 manual_curation exon 34626279 34626390 . + . Parent=GSCOCT00016342001 | |
| 23208 chr1 manual_curation exon 34625226 34625462 . + . Parent=GSCOCT00016342001 | |
| 23209 chr1 manual_curation exon 34622991 34623175 . + . Parent=GSCOCT00016342001 | |
| 23210 chr1 manual_curation exon 34622197 34622658 . + . Parent=GSCOCT00016342001 | |
| 23211 chr1 manual_curation CDS 34631239 34631406 . + 0 Parent=GSCOCT00016342001 | |
| 23212 chr1 manual_curation CDS 34630987 34631136 . + 0 Parent=GSCOCT00016342001 | |
| 23213 chr1 manual_curation CDS 34630851 34630898 . + 0 Parent=GSCOCT00016342001 | |
| 23214 chr1 manual_curation CDS 34629957 34630033 . + 1 Parent=GSCOCT00016342001 | |
| 23215 chr1 manual_curation CDS 34629745 34629847 . + 0 Parent=GSCOCT00016342001 | |
| 23216 chr1 manual_curation CDS 34628996 34629126 . + 1 Parent=GSCOCT00016342001 | |
| 23217 chr1 manual_curation CDS 34628576 34628753 . + 0 Parent=GSCOCT00016342001 | |
| 23218 chr1 manual_curation CDS 34628324 34628381 . + 2 Parent=GSCOCT00016342001 | |
| 23219 chr1 manual_curation CDS 34628115 34628178 . + 1 Parent=GSCOCT00016342001 | |
| 23220 chr1 manual_curation CDS 34627561 34627731 . + 1 Parent=GSCOCT00016342001 | |
| 23221 chr1 manual_curation CDS 34626279 34626390 . + 0 Parent=GSCOCT00016342001 | |
| 23222 chr1 manual_curation CDS 34625226 34625462 . + 0 Parent=GSCOCT00016342001 | |
| 23223 chr1 manual_curation CDS 34622991 34623175 . + 1 Parent=GSCOCT00016342001 | |
| 23224 chr1 manual_curation CDS 34622487 34622658 . + 0 Parent=GSCOCT00016342001 | |
| 23225 chr1 manual_curation gene 34641441 34645607 . + . ID=GSCOCG00016339001;Name=Cc01_g17310 | |
| 23226 chr1 manual_curation mRNA 34641441 34645607 . + . ID=GSCOCT00016339001;Parent=GSCOCG00016339001;Name=Cc01_g17310 | |
| 23227 chr1 manual_curation polypeptide 34641545 34645363 . + . ID=GSCOCP00016339001;Dbxref=GENE3D:G3DSA:2.160.20.10,InterPro:IPR002022,InterPro:IPR011050,InterPro:IPR012334,InterPro:IPR018082,PFAM:PF00544,PRINTS:PR00807,SMART:SM00656,SUPERFAMILY:SSF51126,SwissProt:Q940Q1,SwissProt:Q944R1,SwissProt:Q9M8Z8,TAIR:AT1G04680.1,TAIR:AT3G07010.1,TAIR:AT4G13710.1,TrEMBL:A5C4Q9,TrEMBL:D4NXR8,TrEMBL:D7U3E6;Derives_from=GSCOCT00016339001;Name=Cc01_g17310;Ontology_term=CC_evidence_code:ISS,CC_EC_number:4.2.2.2,PRODUCT:Probable pectate lyase 8,CC_functional_completeness:complete,CC_gene:At3g07010,CC_gene:At4g13710,CC_gene:At1g04680;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016339001~ Probable pectate lyase 8~ At3g07010~ complete;original_location=complement(join(2609561..2609646%2C2609382..2609438%2C2608710..2608784%2C2606566..2607208%2C2606362..2606465%2C2606142..2606280%2C2605828..2606049));owner=coffea | |
| 23228 chr1 manual_curation exon 34645142 34645607 . + . Parent=GSCOCT00016339001 | |
| 23229 chr1 manual_curation exon 34644911 34645049 . + . Parent=GSCOCT00016339001 | |
| 23230 chr1 manual_curation exon 34644726 34644829 . + . Parent=GSCOCT00016339001 | |
| 23231 chr1 manual_curation exon 34643983 34644625 . + . Parent=GSCOCT00016339001 | |
| 23232 chr1 manual_curation exon 34642407 34642481 . + . Parent=GSCOCT00016339001 | |
| 23233 chr1 manual_curation exon 34641753 34641809 . + . Parent=GSCOCT00016339001 | |
| 23234 chr1 manual_curation exon 34641441 34641630 . + . Parent=GSCOCT00016339001 | |
| 23235 chr1 manual_curation CDS 34645142 34645363 . + 0 Parent=GSCOCT00016339001 | |
| 23236 chr1 manual_curation CDS 34644911 34645049 . + 2 Parent=GSCOCT00016339001 | |
| 23237 chr1 manual_curation CDS 34644726 34644829 . + 0 Parent=GSCOCT00016339001 | |
| 23238 chr1 manual_curation CDS 34643983 34644625 . + 2 Parent=GSCOCT00016339001 | |
| 23239 chr1 manual_curation CDS 34642407 34642481 . + 2 Parent=GSCOCT00016339001 | |
| 23240 chr1 manual_curation CDS 34641753 34641809 . + 2 Parent=GSCOCT00016339001 | |
| 23241 chr1 manual_curation CDS 34641545 34641630 . + 0 Parent=GSCOCT00016339001 | |
| 23242 chr1 manual_curation gene 34645706 34649679 . - . ID=GSCOCG00016338001;Name=Cc01_g17320 | |
| 23243 chr1 manual_curation mRNA 34645706 34649679 . - . ID=GSCOCT00016338001;Parent=GSCOCG00016338001;Name=Cc01_g17320 | |
| 23244 chr1 manual_curation polypeptide 34646633 34648518 . - . ID=GSCOCP00016338001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR011009,InterPro:IPR020635,PFAM:PF07714,PROFILE:PS50011,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:C0LGP9,SwissProt:P33543,SwissProt:Q9SCT4,TAIR:AT1G68400.1,TAIR:AT3G24660.1,TAIR:AT3G51740.1,TrEMBL:B9GR84;Derives_from=GSCOCT00016338001;Name=Cc01_g17320;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative kinase-like protein TMKL1,CC_functional_completeness:fragment,CC_gene:TMKL1,CC_gene:IMK3,CC_gene:IMK2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016338001~ Putative kinase-like protein TMKL1~ TMKL1~ fragment;original_location=join(2602673..2603045%2C2603921..2604558);owner=coffea | |
| 23245 chr1 manual_curation exon 34648146 34649679 . - . Parent=GSCOCT00016338001 | |
| 23246 chr1 manual_curation exon 34645706 34647270 . - . Parent=GSCOCT00016338001 | |
| 23247 chr1 manual_curation CDS 34648146 34648518 . - 0 Parent=GSCOCT00016338001 | |
| 23248 chr1 manual_curation CDS 34646633 34647270 . - 1 Parent=GSCOCT00016338001 | |
| 23249 chr1 manual_curation gene 34654112 34660375 . + . ID=GSCOCG00016337001;Name=Cc01_g17330 | |
| 23250 chr1 manual_curation mRNA 34654112 34660375 . + . ID=GSCOCT00016337001;Parent=GSCOCG00016337001;Name=Cc01_g17330 | |
| 23251 chr1 manual_curation polypeptide 34655770 34659932 . + . ID=GSCOCP00016337001;Dbxref=InterPro:IPR004853,PFAM:PF03151,SwissProt:Q9C8M1,SwissProt:Q9LNH5,SwissProt:Q9LRP2,TAIR:AT1G48230.1,TAIR:AT1G53660.1,TAIR:AT3G17430.1,TrEMBL:C6TN13,TrEMBL:D7T686,TrEMBL:I1MHQ0;Derives_from=GSCOCT00016337001;Name=Cc01_g17330;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Probable sugar phosphate/phosphate translocator At3g17430,CC_functional_completeness:complete,CC_gene:At3g17430,CC_gene:At1g48230,CC_gene:At1g53660;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016337001~ Probable sugar phosphate/phosphate translocator At3g17430~ At3g17430~ complete;original_location=complement(join(2595335..2595421%2C2594777..2594884%2C2594406..2594437%2C2594267..2594317%2C2593873..2593934%2C2593524..2593785%2C2592581..2592846%2C2592383..2592477%2C2591259..2591444));owner=coffea | |
| 23252 chr1 manual_curation exon 34654112 34654415 . + . Parent=GSCOCT00016337001 | |
| 23253 chr1 manual_curation exon 34659747 34660375 . + . Parent=GSCOCT00016337001 | |
| 23254 chr1 manual_curation exon 34658714 34658808 . + . Parent=GSCOCT00016337001 | |
| 23255 chr1 manual_curation exon 34658345 34658610 . + . Parent=GSCOCT00016337001 | |
| 23256 chr1 manual_curation exon 34657406 34657667 . + . Parent=GSCOCT00016337001 | |
| 23257 chr1 manual_curation exon 34657257 34657318 . + . Parent=GSCOCT00016337001 | |
| 23258 chr1 manual_curation exon 34656874 34656924 . + . Parent=GSCOCT00016337001 | |
| 23259 chr1 manual_curation exon 34656754 34656785 . + . Parent=GSCOCT00016337001 | |
| 23260 chr1 manual_curation exon 34656307 34656414 . + . Parent=GSCOCT00016337001 | |
| 23261 chr1 manual_curation exon 34655536 34655856 . + . Parent=GSCOCT00016337001 | |
| 23262 chr1 manual_curation CDS 34659747 34659932 . + 0 Parent=GSCOCT00016337001 | |
| 23263 chr1 manual_curation CDS 34658714 34658808 . + 1 Parent=GSCOCT00016337001 | |
| 23264 chr1 manual_curation CDS 34658345 34658610 . + 2 Parent=GSCOCT00016337001 | |
| 23265 chr1 manual_curation CDS 34657406 34657667 . + 1 Parent=GSCOCT00016337001 | |
| 23266 chr1 manual_curation CDS 34657257 34657318 . + 2 Parent=GSCOCT00016337001 | |
| 23267 chr1 manual_curation CDS 34656874 34656924 . + 2 Parent=GSCOCT00016337001 | |
| 23268 chr1 manual_curation CDS 34656754 34656785 . + 0 Parent=GSCOCT00016337001 | |
| 23269 chr1 manual_curation CDS 34656307 34656414 . + 0 Parent=GSCOCT00016337001 | |
| 23270 chr1 manual_curation CDS 34655770 34655856 . + 0 Parent=GSCOCT00016337001 | |
| 23271 chr1 manual_curation gene 34661772 34664598 . + . ID=GSCOCG00016336001;Name=Cc01_g17340 | |
| 23272 chr1 manual_curation mRNA 34661772 34664598 . + . ID=GSCOCT00016336001;Parent=GSCOCG00016336001;Name=Cc01_g17340 | |
| 23273 chr1 manual_curation polypeptide 34661829 34664598 . + . ID=GSCOCP00016336001;Dbxref=InterPro:IPR002085,InterPro:IPR002328,InterPro:IPR011032,InterPro:IPR013149,InterPro:IPR013154,PANTHER:PTHR11695,PFAM:PF00107,PFAM:PF08240,PROSITE:PS00059,SUPERFAMILY:SSF50129,SwissProt:P14673,SwissProt:P14674,SwissProt:P14675,TAIR:AT1G77120.1,TAIR:AT5G24760.1,TAIR:AT5G43940.2,TrEMBL:B9SJJ8,TrEMBL:D7U4F6,TrEMBL:Q6IVK8;Derives_from=GSCOCT00016336001;Name=Cc01_g17340;Ontology_term=CC_evidence_code:ISS,GO:0008270,GO:0016491,GO:0055114,CC_EC_number:1.1.1.284,PRODUCT:Alcohol dehydrogenase 1,CC_functional_completeness:complete,CC_gene:ADH1,CC_gene:ADH3,CC_gene:ADH2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016336001~ Alcohol dehydrogenase 1~ ADH1~ complete;original_location=complement(join(2589326..2589362%2C2588994..2589130%2C2588501..2588547%2C2588020..2588345%2C2587848..2587930%2C2587584..2587659%2C2587425..2587486%2C2587232..2587327%2C2586830..2586991%2C2586593..2586709));owner=coffea | |
| 23274 chr1 manual_curation exon 34664482 34664598 . + . Parent=GSCOCT00016336001 | |
| 23275 chr1 manual_curation exon 34664200 34664361 . + . Parent=GSCOCT00016336001 | |
| 23276 chr1 manual_curation exon 34663864 34663959 . + . Parent=GSCOCT00016336001 | |
| 23277 chr1 manual_curation exon 34663705 34663766 . + . Parent=GSCOCT00016336001 | |
| 23278 chr1 manual_curation exon 34663532 34663607 . + . Parent=GSCOCT00016336001 | |
| 23279 chr1 manual_curation exon 34663261 34663343 . + . Parent=GSCOCT00016336001 | |
| 23280 chr1 manual_curation exon 34662846 34663171 . + . Parent=GSCOCT00016336001 | |
| 23281 chr1 manual_curation exon 34662644 34662690 . + . Parent=GSCOCT00016336001 | |
| 23282 chr1 manual_curation exon 34662061 34662197 . + . Parent=GSCOCT00016336001 | |
| 23283 chr1 manual_curation exon 34661772 34661865 . + . Parent=GSCOCT00016336001 | |
| 23284 chr1 manual_curation CDS 34664482 34664598 . + 0 Parent=GSCOCT00016336001 | |
| 23285 chr1 manual_curation CDS 34664200 34664361 . + 0 Parent=GSCOCT00016336001 | |
| 23286 chr1 manual_curation CDS 34663864 34663959 . + 0 Parent=GSCOCT00016336001 | |
| 23287 chr1 manual_curation CDS 34663705 34663766 . + 1 Parent=GSCOCT00016336001 | |
| 23288 chr1 manual_curation CDS 34663532 34663607 . + 0 Parent=GSCOCT00016336001 | |
| 23289 chr1 manual_curation CDS 34663261 34663343 . + 1 Parent=GSCOCT00016336001 | |
| 23290 chr1 manual_curation CDS 34662846 34663171 . + 2 Parent=GSCOCT00016336001 | |
| 23291 chr1 manual_curation CDS 34662644 34662690 . + 0 Parent=GSCOCT00016336001 | |
| 23292 chr1 manual_curation CDS 34662061 34662197 . + 1 Parent=GSCOCT00016336001 | |
| 23293 chr1 manual_curation CDS 34661829 34661865 . + 0 Parent=GSCOCT00016336001 | |
| 23294 chr1 manual_curation gene 34664713 34668111 . - . ID=GSCOCG00016335001;Name=Cc01_g17350 | |
| 23295 chr1 manual_curation mRNA 34664713 34668111 . - . ID=GSCOCT00016335001;Parent=GSCOCG00016335001;Name=Cc01_g17350 | |
| 23296 chr1 manual_curation polypeptide 34665153 34667897 . - . ID=GSCOCP00016335001;Dbxref=TAIR:AT4G13220.1,TrEMBL:C6T3A8,TrEMBL:I1KZD1,TrEMBL:I1N2D5;Derives_from=GSCOCT00016335001;Name=Cc01_g17350;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016335001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B Has 27 Blast hits to 27 proteins in 10 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 27%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(2583294..2583537%2C2585009..2585070%2C2585160..2585264%2C2585907..2586038);owner=coffea | |
| 23297 chr1 manual_curation exon 34667654 34668111 . - . Parent=GSCOCT00016335001 | |
| 23298 chr1 manual_curation exon 34666121 34666182 . - . Parent=GSCOCT00016335001 | |
| 23299 chr1 manual_curation exon 34665927 34666031 . - . Parent=GSCOCT00016335001 | |
| 23300 chr1 manual_curation exon 34664713 34665284 . - . Parent=GSCOCT00016335001 | |
| 23301 chr1 manual_curation CDS 34667654 34667897 . - 0 Parent=GSCOCT00016335001 | |
| 23302 chr1 manual_curation CDS 34666121 34666182 . - 1 Parent=GSCOCT00016335001 | |
| 23303 chr1 manual_curation CDS 34665927 34666031 . - 0 Parent=GSCOCT00016335001 | |
| 23304 chr1 manual_curation CDS 34665153 34665284 . - 0 Parent=GSCOCT00016335001 | |
| 23305 chr1 manual_curation gene 34670548 34674090 . + . ID=GSCOCG00016334001;Name=Cc01_g17360 | |
| 23306 chr1 manual_curation mRNA 34670548 34674090 . + . ID=GSCOCT00016334001;Parent=GSCOCG00016334001;Name=Cc01_g17360 | |
| 23307 chr1 manual_curation polypeptide 34670548 34674090 . + . ID=GSCOCP00016334001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:C0LGR3,SwissProt:C0LGV1,SwissProt:Q9LHP4,TAIR:AT3G24240.1,TAIR:AT5G48940.1,TAIR:AT5G56040.2,TrEMBL:B9S566,TrEMBL:I1KZD2,TrEMBL:I1N2D6;Derives_from=GSCOCT00016334001;Name=Cc01_g17360;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:LRR receptor-like serine/threonine-protein kinase RCH1,CC_functional_completeness:complete,CC_gene:RCH1,CC_gene:RCH2,CC_gene:At4g26540;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016334001~ LRR receptor-like serine/threonine-protein kinase RCH1~ RCH1~ complete;original_location=complement(join(2577724..2580643%2C2577101..2577624));owner=coffea | |
| 23308 chr1 manual_curation exon 34673567 34674090 . + . Parent=GSCOCT00016334001 | |
| 23309 chr1 manual_curation exon 34670548 34673467 . + . Parent=GSCOCT00016334001 | |
| 23310 chr1 manual_curation CDS 34673567 34674090 . + 1 Parent=GSCOCT00016334001 | |
| 23311 chr1 manual_curation CDS 34670548 34673467 . + 0 Parent=GSCOCT00016334001 | |
| 23312 chr1 manual_curation gene 34675481 34676372 . + . ID=GSCOCG00016333001;Name=Cc01_g17370 | |
| 23313 chr1 manual_curation mRNA 34675481 34676372 . + . ID=GSCOCT00016333001;Parent=GSCOCG00016333001;Name=Cc01_g17370 | |
| 23314 chr1 manual_curation polypeptide 34675481 34676372 . + . ID=GSCOCP00016333001;Dbxref=SwissProt:Q8LFD5,TAIR:AT4G13230.1,TrEMBL:A5B0I1,TrEMBL:B9GR88,TrEMBL:B9S570;Derives_from=GSCOCT00016333001;Name=Cc01_g17370;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Predicted protein,CC_functional_completeness:complete,CC_gene:At4g13230;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016333001~ Predicted protein~ At4g13230~ complete;original_location=complement(join(2575591..2575710%2C2575280..2575429%2C2574819..2575034));owner=coffea | |
| 23315 chr1 manual_curation exon 34676157 34676372 . + . Parent=GSCOCT00016333001 | |
| 23316 chr1 manual_curation exon 34675762 34675911 . + . Parent=GSCOCT00016333001 | |
| 23317 chr1 manual_curation exon 34675481 34675600 . + . Parent=GSCOCT00016333001 | |
| 23318 chr1 manual_curation CDS 34676157 34676372 . + 0 Parent=GSCOCT00016333001 | |
| 23319 chr1 manual_curation CDS 34675762 34675911 . + 0 Parent=GSCOCT00016333001 | |
| 23320 chr1 manual_curation CDS 34675481 34675600 . + 0 Parent=GSCOCT00016333001 | |
| 23321 chr1 manual_curation gene 34687698 34694995 . + . ID=GSCOCG00016331001;Name=Cc01_g17380 | |
| 23322 chr1 manual_curation mRNA 34687698 34694995 . + . ID=GSCOCT00016331001;Parent=GSCOCG00016331001;Name=Cc01_g17380 | |
| 23323 chr1 manual_curation polypeptide 34687698 34694536 . + . ID=GSCOCP00016331001;Dbxref=InterPro:IPR003340,PFAM:PF02362,PROFILE:PS50863,SwissProt:P26307,SwissProt:P37398,SwissProt:Q01593,TAIR:AT1G28300.1,TAIR:AT3G24650.1,TAIR:AT3G26790.1,TrEMBL:O48619,TrEMBL:O48620,TrEMBL:Q5K686;Derives_from=GSCOCT00016331001;Name=Cc01_g17380;Ontology_term=CC_evidence_code:ISS,GO:0003677,CC_EC_number:missing_EC_number,PRODUCT:Putative B3 domain-containing transcription factor ABI3,CC_functional_completeness:complete,CC_gene:ABI3,CC_gene:VP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016331001~ Putative B3 domain-containing transcription factor ABI3~ ABI3~ complete;original_location=complement(join(2563186..2563493%2C2562915..2563014%2C2562518..2562803%2C2560680..2560724%2C2559020..2559805%2C2558687..2558950%2C2557815..2558524%2C2557746..2557769%2C2557485..2557577%2C2557258..2557358%2C2557087..2557133%2C2556904..2556980%2C2556655..2556801));owner=coffea | |
| 23324 chr1 manual_curation exon 34694390 34694995 . + . Parent=GSCOCT00016331001 | |
| 23325 chr1 manual_curation exon 34694211 34694287 . + . Parent=GSCOCT00016331001 | |
| 23326 chr1 manual_curation exon 34694058 34694104 . + . Parent=GSCOCT00016331001 | |
| 23327 chr1 manual_curation exon 34693833 34693933 . + . Parent=GSCOCT00016331001 | |
| 23328 chr1 manual_curation exon 34693614 34693706 . + . Parent=GSCOCT00016331001 | |
| 23329 chr1 manual_curation exon 34693422 34693445 . + . Parent=GSCOCT00016331001 | |
| 23330 chr1 manual_curation exon 34692667 34693376 . + . Parent=GSCOCT00016331001 | |
| 23331 chr1 manual_curation exon 34692241 34692504 . + . Parent=GSCOCT00016331001 | |
| 23332 chr1 manual_curation exon 34691386 34692171 . + . Parent=GSCOCT00016331001 | |
| 23333 chr1 manual_curation exon 34690467 34690511 . + . Parent=GSCOCT00016331001 | |
| 23334 chr1 manual_curation exon 34688388 34688673 . + . Parent=GSCOCT00016331001 | |
| 23335 chr1 manual_curation exon 34688177 34688276 . + . Parent=GSCOCT00016331001 | |
| 23336 chr1 manual_curation exon 34687698 34688005 . + . Parent=GSCOCT00016331001 | |
| 23337 chr1 manual_curation CDS 34694390 34694536 . + 0 Parent=GSCOCT00016331001 | |
| 23338 chr1 manual_curation CDS 34694211 34694287 . + 1 Parent=GSCOCT00016331001 | |
| 23339 chr1 manual_curation CDS 34694058 34694104 . + 2 Parent=GSCOCT00016331001 | |
| 23340 chr1 manual_curation CDS 34693833 34693933 . + 0 Parent=GSCOCT00016331001 | |
| 23341 chr1 manual_curation CDS 34693614 34693706 . + 0 Parent=GSCOCT00016331001 | |
| 23342 chr1 manual_curation CDS 34693422 34693445 . + 0 Parent=GSCOCT00016331001 | |
| 23343 chr1 manual_curation CDS 34692667 34693376 . + 1 Parent=GSCOCT00016331001 | |
| 23344 chr1 manual_curation CDS 34692241 34692504 . + 1 Parent=GSCOCT00016331001 | |
| 23345 chr1 manual_curation CDS 34691386 34692171 . + 1 Parent=GSCOCT00016331001 | |
| 23346 chr1 manual_curation CDS 34690467 34690511 . + 1 Parent=GSCOCT00016331001 | |
| 23347 chr1 manual_curation CDS 34688388 34688673 . + 0 Parent=GSCOCT00016331001 | |
| 23348 chr1 manual_curation CDS 34688177 34688276 . + 2 Parent=GSCOCT00016331001 | |
| 23349 chr1 manual_curation CDS 34687698 34688005 . + 0 Parent=GSCOCT00016331001 | |
| 23350 chr1 manual_curation gene 34698051 34699092 . + . ID=GSCOCG00016329001;Name=Cc01_g17390 | |
| 23351 chr1 manual_curation mRNA 34698051 34699092 . + . ID=GSCOCT00016329001;Parent=GSCOCG00016329001;Name=Cc01_g17390 | |
| 23352 chr1 manual_curation polypeptide 34698051 34698401 . + . ID=GSCOCP00016329001;Derives_from=GSCOCT00016329001;Name=Cc01_g17390;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016329001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(2552790..2553140);owner=coffea | |
| 23353 chr1 manual_curation exon 34698051 34699092 . + . Parent=GSCOCT00016329001 | |
| 23354 chr1 manual_curation CDS 34698051 34698401 . + 0 Parent=GSCOCT00016329001 | |
| 23355 chr1 manual_curation gene 34699642 34703649 . - . ID=GSCOCG00016328001;Name=Cc01_g17400 | |
| 23356 chr1 manual_curation mRNA 34699642 34703649 . - . ID=GSCOCT00016328001;Parent=GSCOCG00016328001;Name=Cc01_g17400 | |
| 23357 chr1 manual_curation polypeptide 34700100 34703482 . - . ID=GSCOCP00016328001;Dbxref=InterPro:IPR003593,InterPro:IPR003959,InterPro:IPR003960,InterPro:IPR005937,PFAM:PF00004,PROSITE:PS00674,SMART:SM00382,SwissProt:P46466,SwissProt:Q9SL67,SwissProt:Q9SZD4,TAIR:AT2G20140.1,TAIR:AT4G29040.1,TAIR:AT5G58290.1,TIGRFAMs:TIGR01242,TrEMBL:A5BEF3,TrEMBL:E9RGY2,TrEMBL:Q38JH4;Derives_from=GSCOCT00016328001;Name=Cc01_g17400;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0005737,GO:0016787,GO:0017111,GO:0030163,CC_EC_number:3.6.4.3,CC_EC_number:3.6.4.3,PRODUCT:26S proteasome regulatory subunit 4 homolog A,CC_functional_completeness:complete,CC_gene:RPT2A,CC_gene:RPT2B,CC_gene:TBP2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016328001~ 26S proteasome regulatory subunit 4 homolog A~ RPT2A~ complete;original_location=join(2547709..2548185%2C2549376..2549621%2C2550136..2550305%2C2550378..2550594%2C2550669..2550809%2C2551008..2551091);owner=coffea | |
| 23358 chr1 manual_curation exon 34703006 34703649 . - . Parent=GSCOCT00016328001 | |
| 23359 chr1 manual_curation exon 34701570 34701815 . - . Parent=GSCOCT00016328001 | |
| 23360 chr1 manual_curation exon 34700886 34701055 . - . Parent=GSCOCT00016328001 | |
| 23361 chr1 manual_curation exon 34700597 34700813 . - . Parent=GSCOCT00016328001 | |
| 23362 chr1 manual_curation exon 34700382 34700522 . - . Parent=GSCOCT00016328001 | |
| 23363 chr1 manual_curation exon 34699642 34700183 . - . Parent=GSCOCT00016328001 | |
| 23364 chr1 manual_curation CDS 34703006 34703482 . - 0 Parent=GSCOCT00016328001 | |
| 23365 chr1 manual_curation CDS 34701570 34701815 . - 0 Parent=GSCOCT00016328001 | |
| 23366 chr1 manual_curation CDS 34700886 34701055 . - 0 Parent=GSCOCT00016328001 | |
| 23367 chr1 manual_curation CDS 34700597 34700813 . - 2 Parent=GSCOCT00016328001 | |
| 23368 chr1 manual_curation CDS 34700382 34700522 . - 0 Parent=GSCOCT00016328001 | |
| 23369 chr1 manual_curation CDS 34700100 34700183 . - 0 Parent=GSCOCT00016328001 | |
| 23370 chr1 manual_curation gene 34710420 34710953 . + . ID=GSCOCG00016327001;Name=Cc01_g17410 | |
| 23371 chr1 manual_curation mRNA 34710420 34710953 . + . ID=GSCOCT00016327001;Parent=GSCOCG00016327001;Name=Cc01_g17410 | |
| 23372 chr1 manual_curation polypeptide 34710420 34710953 . + . ID=GSCOCP00016327001;Dbxref=SwissProt:Q7XR60,SwissProt:Q7XR61,SwissProt:Q9C6D2,TAIR:AT1G49820.1,TrEMBL:A5AY55,TrEMBL:C6T7R6,TrEMBL:I1NFY2;Derives_from=GSCOCT00016327001;Name=Cc01_g17410;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.7.1.100,PRODUCT:Methylthioribose kinase,CC_functional_completeness:fragment,CC_gene:MTK,CC_gene:MTK1,CC_gene:MTK2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016327001~ Methylthioribose kinase~ MTK~ fragment;original_location=complement(2540238..2540771);owner=coffea | |
| 23373 chr1 manual_curation exon 34710420 34710953 . + . Parent=GSCOCT00016327001 | |
| 23374 chr1 manual_curation CDS 34710420 34710953 . + 0 Parent=GSCOCT00016327001 | |
| 23375 chr1 manual_curation gene 34711497 34714276 . + . ID=GSCOCG00016326001;Name=Cc01_g17420 | |
| 23376 chr1 manual_curation mRNA 34711497 34714276 . + . ID=GSCOCT00016326001;Parent=GSCOCG00016326001;Name=Cc01_g17420 | |
| 23377 chr1 manual_curation polypeptide 34711631 34713942 . + . ID=GSCOCP00016326001;Dbxref=InterPro:IPR007529,PFAM:PF04438,PROFILE:PS51083,TAIR:AT4G28820.1,TrEMBL:A9NPU9,TrEMBL:C6T4W0,TrEMBL:I1LYT1;Derives_from=GSCOCT00016326001;Name=Cc01_g17420;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative HIT-type Zinc finger family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016326001~ Putative HIT-type Zinc finger family protein~ unknown_gene~ complete;original_location=complement(join(2539419..2539560%2C2538575..2538661%2C2537585..2537673%2C2537406..2537456%2C2537249..2537278));owner=coffea | |
| 23378 chr1 manual_curation exon 34713913 34714276 . + . Parent=GSCOCT00016326001 | |
| 23379 chr1 manual_curation exon 34713735 34713785 . + . Parent=GSCOCT00016326001 | |
| 23380 chr1 manual_curation exon 34713518 34713606 . + . Parent=GSCOCT00016326001 | |
| 23381 chr1 manual_curation exon 34712530 34712616 . + . Parent=GSCOCT00016326001 | |
| 23382 chr1 manual_curation exon 34711497 34711772 . + . Parent=GSCOCT00016326001 | |
| 23383 chr1 manual_curation CDS 34713913 34713942 . + 0 Parent=GSCOCT00016326001 | |
| 23384 chr1 manual_curation CDS 34713735 34713785 . + 0 Parent=GSCOCT00016326001 | |
| 23385 chr1 manual_curation CDS 34713518 34713606 . + 1 Parent=GSCOCT00016326001 | |
| 23386 chr1 manual_curation CDS 34712530 34712616 . + 1 Parent=GSCOCT00016326001 | |
| 23387 chr1 manual_curation CDS 34711631 34711772 . + 0 Parent=GSCOCT00016326001 | |
| 23388 chr1 manual_curation gene 34715076 34721090 . - . ID=GSCOCG00016325001;Name=Cc01_g17430 | |
| 23389 chr1 manual_curation mRNA 34715076 34721090 . - . ID=GSCOCT00016325001;Parent=GSCOCG00016325001;Name=Cc01_g17430 | |
| 23390 chr1 manual_curation polypeptide 34716078 34720770 . - . ID=GSCOCP00016325001;Dbxref=GENE3D:G3DSA:4.10.280.10,InterPro:IPR001092,InterPro:IPR011598,PFAM:PF00010,PROFILE:PS50888,SMART:SM00353,SUPERFAMILY:SSF47459,SwissProt:Q8GZM7,SwissProt:Q9SVU6,SwissProt:Q9SVU7,TAIR:AT2G20180.2,TAIR:AT4G28790.1,TAIR:AT4G28800.1,TrEMBL:B9GR94,TrEMBL:B9S581,TrEMBL:I1LYS9;Derives_from=GSCOCT00016325001;Name=Cc01_g17430;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0030528,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative Transcription factor PIF1,CC_functional_completeness:complete,CC_gene:PIF1,CC_gene:BHLH56,CC_gene:BHLH23;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016325001~ Putative Transcription factor PIF1~ PIF1~ complete;original_location=join(2530421..2530524%2C2530687..2531536%2C2532631..2532729%2C2532814..2532879%2C2532988..2533053%2C2534407..2534803%2C2535079..2535113);owner=coffea | |
| 23391 chr1 manual_curation exon 34715637 34715774 . - . Parent=GSCOCT00016325001 | |
| 23392 chr1 manual_curation exon 34715076 34715405 . - . Parent=GSCOCT00016325001 | |
| 23393 chr1 manual_curation exon 34720667 34721090 . - . Parent=GSCOCT00016325001 | |
| 23394 chr1 manual_curation exon 34719655 34720504 . - . Parent=GSCOCT00016325001 | |
| 23395 chr1 manual_curation exon 34718462 34718560 . - . Parent=GSCOCT00016325001 | |
| 23396 chr1 manual_curation exon 34718312 34718377 . - . Parent=GSCOCT00016325001 | |
| 23397 chr1 manual_curation exon 34718138 34718203 . - . Parent=GSCOCT00016325001 | |
| 23398 chr1 manual_curation exon 34716388 34716784 . - . Parent=GSCOCT00016325001 | |
| 23399 chr1 manual_curation exon 34716040 34716112 . - . Parent=GSCOCT00016325001 | |
| 23400 chr1 manual_curation CDS 34720667 34720770 . - 0 Parent=GSCOCT00016325001 | |
| 23401 chr1 manual_curation CDS 34719655 34720504 . - 2 Parent=GSCOCT00016325001 | |
| 23402 chr1 manual_curation CDS 34718462 34718560 . - 0 Parent=GSCOCT00016325001 | |
| 23403 chr1 manual_curation CDS 34718312 34718377 . - 0 Parent=GSCOCT00016325001 | |
| 23404 chr1 manual_curation CDS 34718138 34718203 . - 0 Parent=GSCOCT00016325001 | |
| 23405 chr1 manual_curation CDS 34716388 34716784 . - 0 Parent=GSCOCT00016325001 | |
| 23406 chr1 manual_curation CDS 34716078 34716112 . - 1 Parent=GSCOCT00016325001 | |
| 23407 chr1 manual_curation gene 34728043 34733271 . - . ID=GSCOCG00016324001;Name=Cc01_g17440 | |
| 23408 chr1 manual_curation mRNA 34728043 34733271 . - . ID=GSCOCT00016324001;Parent=GSCOCG00016324001;Name=Cc01_g17440 | |
| 23409 chr1 manual_curation polypeptide 34728262 34733221 . - . ID=GSCOCP00016324001;Dbxref=HAMAP:MF_00600,InterPro:IPR001844,InterPro:IPR002423,InterPro:IPR018370,PANTHER:PTHR11353,PFAM:PF00118,PRINTS:PR00298,PROSITE:PS00296,SUPERFAMILY:SSF48592,SwissProt:P29197,SwissProt:Q05045,SwissProt:Q05046,TAIR:AT2G33210.1,TAIR:AT3G13860.1,TAIR:AT3G23990.1,TIGRFAMs:TIGR02348,TrEMBL:B9RWQ2,TrEMBL:D7L4A9,TrEMBL:D7TS57;Derives_from=GSCOCT00016324001;Name=Cc01_g17440;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0005524,GO:0005737,GO:0006457,GO:0042026,GO:0044267,CC_EC_number:missing_EC_number,PRODUCT:Chaperonin CPN60-2%2C mitochondrial,CC_functional_completeness:complete,CC_gene:CPN60-2,CC_gene:CPN60,CC_gene:CPN60-1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016324001~ Chaperonin CPN60-2%2C mitochondrial~ CPN60-2~ complete;original_location=join(2517970..2518007%2C2518117..2518141%2C2518271..2518402%2C2518762..2518921%2C2519014..2519189%2C2519298..2519393%2C2520038..2520142%2C2520253..2520339%2C2520416..2520505%2C2520590..2520670%2C2520802..2520870%2C2521103..2521180%2C2521284..2521379%2C2521539..2521638%2C2521714..2521817%2C2522440..2522545%2C2522643..2522721%2C2522821..2522929);owner=coffea | |
| 23410 chr1 manual_curation exon 34733184 34733271 . - . Parent=GSCOCT00016324001 | |
| 23411 chr1 manual_curation exon 34733050 34733074 . - . Parent=GSCOCT00016324001 | |
| 23412 chr1 manual_curation exon 34732789 34732920 . - . Parent=GSCOCT00016324001 | |
| 23413 chr1 manual_curation exon 34732270 34732429 . - . Parent=GSCOCT00016324001 | |
| 23414 chr1 manual_curation exon 34732002 34732177 . - . Parent=GSCOCT00016324001 | |
| 23415 chr1 manual_curation exon 34731798 34731893 . - . Parent=GSCOCT00016324001 | |
| 23416 chr1 manual_curation exon 34731049 34731153 . - . Parent=GSCOCT00016324001 | |
| 23417 chr1 manual_curation exon 34730852 34730938 . - . Parent=GSCOCT00016324001 | |
| 23418 chr1 manual_curation exon 34730686 34730775 . - . Parent=GSCOCT00016324001 | |
| 23419 chr1 manual_curation exon 34730521 34730601 . - . Parent=GSCOCT00016324001 | |
| 23420 chr1 manual_curation exon 34730321 34730389 . - . Parent=GSCOCT00016324001 | |
| 23421 chr1 manual_curation exon 34730011 34730088 . - . Parent=GSCOCT00016324001 | |
| 23422 chr1 manual_curation exon 34729812 34729907 . - . Parent=GSCOCT00016324001 | |
| 23423 chr1 manual_curation exon 34729553 34729652 . - . Parent=GSCOCT00016324001 | |
| 23424 chr1 manual_curation exon 34729374 34729477 . - . Parent=GSCOCT00016324001 | |
| 23425 chr1 manual_curation exon 34728646 34728751 . - . Parent=GSCOCT00016324001 | |
| 23426 chr1 manual_curation exon 34728470 34728548 . - . Parent=GSCOCT00016324001 | |
| 23427 chr1 manual_curation exon 34728043 34728370 . - . Parent=GSCOCT00016324001 | |
| 23428 chr1 manual_curation CDS 34733184 34733221 . - 0 Parent=GSCOCT00016324001 | |
| 23429 chr1 manual_curation CDS 34733050 34733074 . - 2 Parent=GSCOCT00016324001 | |
| 23430 chr1 manual_curation CDS 34732789 34732920 . - 0 Parent=GSCOCT00016324001 | |
| 23431 chr1 manual_curation CDS 34732270 34732429 . - 0 Parent=GSCOCT00016324001 | |
| 23432 chr1 manual_curation CDS 34732002 34732177 . - 1 Parent=GSCOCT00016324001 | |
| 23433 chr1 manual_curation CDS 34731798 34731893 . - 0 Parent=GSCOCT00016324001 | |
| 23434 chr1 manual_curation CDS 34731049 34731153 . - 0 Parent=GSCOCT00016324001 | |
| 23435 chr1 manual_curation CDS 34730852 34730938 . - 0 Parent=GSCOCT00016324001 | |
| 23436 chr1 manual_curation CDS 34730686 34730775 . - 0 Parent=GSCOCT00016324001 | |
| 23437 chr1 manual_curation CDS 34730521 34730601 . - 0 Parent=GSCOCT00016324001 | |
| 23438 chr1 manual_curation CDS 34730321 34730389 . - 0 Parent=GSCOCT00016324001 | |
| 23439 chr1 manual_curation CDS 34730011 34730088 . - 0 Parent=GSCOCT00016324001 | |
| 23440 chr1 manual_curation CDS 34729812 34729907 . - 0 Parent=GSCOCT00016324001 | |
| 23441 chr1 manual_curation CDS 34729553 34729652 . - 0 Parent=GSCOCT00016324001 | |
| 23442 chr1 manual_curation CDS 34729374 34729477 . - 1 Parent=GSCOCT00016324001 | |
| 23443 chr1 manual_curation CDS 34728646 34728751 . - 0 Parent=GSCOCT00016324001 | |
| 23444 chr1 manual_curation CDS 34728470 34728548 . - 1 Parent=GSCOCT00016324001 | |
| 23445 chr1 manual_curation CDS 34728262 34728370 . - 2 Parent=GSCOCT00016324001 | |
| 23446 chr1 manual_curation gene 34739421 34751250 . - . ID=GSCOCG00016323001;Name=Cc01_g17450 | |
| 23447 chr1 manual_curation mRNA 34739421 34751250 . - . ID=GSCOCT00016323001;Parent=GSCOCG00016323001;Name=Cc01_g17450 | |
| 23448 chr1 manual_curation polypeptide 34739778 34750890 . - . ID=GSCOCP00016323001;Dbxref=GENE3D:G3DSA:1.25.10.10,InterPro:IPR000357,InterPro:IPR011989,InterPro:IPR016024,InterPro:IPR021133,PFAM:PF02985,PROFILE:PS50077,SUPERFAMILY:SSF48371,SwissProt:A1A5G0,SwissProt:A1A5K2,SwissProt:Q4U0G1,TAIR:AT2G20190.1,TrEMBL:B9GR98,TrEMBL:I1JPB4,TrEMBL:I1N9Y3;Derives_from=GSCOCT00016323001;Name=Cc01_g17450;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:CLIP-associated protein,CC_functional_completeness:complete,CC_gene:clasp1,CC_gene:clasp1b,CC_gene:clasp1-a;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016323001~ CLIP-associated protein~ clasp1~ complete;original_location=join(2500301..2500633%2C2501643..2501798%2C2501929..2501991%2C2502175..2502243%2C2502418..2502583%2C2502732..2502893%2C2503791..2503888%2C2504522..2504596%2C2504674..2504742%2C2504837..2504922%2C2505012..2505129%2C2505321..2505419%2C2505570..2505909%2C2506083..2507878%2C2508017..2508118%2C2509021..2509125%2C2509268..2509342%2C2509415..2509483%2C2509583..2509651%2C2510545..2510646%2C2511252..2511413);owner=coffea | |
| 23449 chr1 manual_curation exon 34750558 34751250 . - . Parent=GSCOCT00016323001 | |
| 23450 chr1 manual_curation exon 34749393 34749548 . - . Parent=GSCOCT00016323001 | |
| 23451 chr1 manual_curation exon 34749200 34749262 . - . Parent=GSCOCT00016323001 | |
| 23452 chr1 manual_curation exon 34748948 34749016 . - . Parent=GSCOCT00016323001 | |
| 23453 chr1 manual_curation exon 34748608 34748773 . - . Parent=GSCOCT00016323001 | |
| 23454 chr1 manual_curation exon 34748298 34748459 . - . Parent=GSCOCT00016323001 | |
| 23455 chr1 manual_curation exon 34747303 34747400 . - . Parent=GSCOCT00016323001 | |
| 23456 chr1 manual_curation exon 34746595 34746669 . - . Parent=GSCOCT00016323001 | |
| 23457 chr1 manual_curation exon 34746449 34746517 . - . Parent=GSCOCT00016323001 | |
| 23458 chr1 manual_curation exon 34746269 34746354 . - . Parent=GSCOCT00016323001 | |
| 23459 chr1 manual_curation exon 34746062 34746179 . - . Parent=GSCOCT00016323001 | |
| 23460 chr1 manual_curation exon 34745772 34745870 . - . Parent=GSCOCT00016323001 | |
| 23461 chr1 manual_curation exon 34745282 34745621 . - . Parent=GSCOCT00016323001 | |
| 23462 chr1 manual_curation exon 34743313 34745108 . - . Parent=GSCOCT00016323001 | |
| 23463 chr1 manual_curation exon 34743073 34743174 . - . Parent=GSCOCT00016323001 | |
| 23464 chr1 manual_curation exon 34742066 34742170 . - . Parent=GSCOCT00016323001 | |
| 23465 chr1 manual_curation exon 34741849 34741923 . - . Parent=GSCOCT00016323001 | |
| 23466 chr1 manual_curation exon 34741708 34741776 . - . Parent=GSCOCT00016323001 | |
| 23467 chr1 manual_curation exon 34741540 34741608 . - . Parent=GSCOCT00016323001 | |
| 23468 chr1 manual_curation exon 34740545 34740646 . - . Parent=GSCOCT00016323001 | |
| 23469 chr1 manual_curation exon 34739421 34739939 . - . Parent=GSCOCT00016323001 | |
| 23470 chr1 manual_curation CDS 34750558 34750890 . - 0 Parent=GSCOCT00016323001 | |
| 23471 chr1 manual_curation CDS 34749393 34749548 . - 0 Parent=GSCOCT00016323001 | |
| 23472 chr1 manual_curation CDS 34749200 34749262 . - 0 Parent=GSCOCT00016323001 | |
| 23473 chr1 manual_curation CDS 34748948 34749016 . - 0 Parent=GSCOCT00016323001 | |
| 23474 chr1 manual_curation CDS 34748608 34748773 . - 0 Parent=GSCOCT00016323001 | |
| 23475 chr1 manual_curation CDS 34748298 34748459 . - 1 Parent=GSCOCT00016323001 | |
| 23476 chr1 manual_curation CDS 34747303 34747400 . - 1 Parent=GSCOCT00016323001 | |
| 23477 chr1 manual_curation CDS 34746595 34746669 . - 0 Parent=GSCOCT00016323001 | |
| 23478 chr1 manual_curation CDS 34746449 34746517 . - 0 Parent=GSCOCT00016323001 | |
| 23479 chr1 manual_curation CDS 34746269 34746354 . - 0 Parent=GSCOCT00016323001 | |
| 23480 chr1 manual_curation CDS 34746062 34746179 . - 2 Parent=GSCOCT00016323001 | |
| 23481 chr1 manual_curation CDS 34745772 34745870 . - 0 Parent=GSCOCT00016323001 | |
| 23482 chr1 manual_curation CDS 34745282 34745621 . - 0 Parent=GSCOCT00016323001 | |
| 23483 chr1 manual_curation CDS 34743313 34745108 . - 1 Parent=GSCOCT00016323001 | |
| 23484 chr1 manual_curation CDS 34743073 34743174 . - 0 Parent=GSCOCT00016323001 | |
| 23485 chr1 manual_curation CDS 34742066 34742170 . - 0 Parent=GSCOCT00016323001 | |
| 23486 chr1 manual_curation CDS 34741849 34741923 . - 0 Parent=GSCOCT00016323001 | |
| 23487 chr1 manual_curation CDS 34741708 34741776 . - 0 Parent=GSCOCT00016323001 | |
| 23488 chr1 manual_curation CDS 34741540 34741608 . - 0 Parent=GSCOCT00016323001 | |
| 23489 chr1 manual_curation CDS 34740545 34740646 . - 0 Parent=GSCOCT00016323001 | |
| 23490 chr1 manual_curation CDS 34739778 34739939 . - 0 Parent=GSCOCT00016323001 | |
| 23491 chr1 manual_curation gene 34753311 34755816 . - . ID=GSCOCG00016322001;Name=Cc01_g17460 | |
| 23492 chr1 manual_curation mRNA 34753311 34755816 . - . ID=GSCOCT00016322001;Parent=GSCOCG00016322001;Name=Cc01_g17460 | |
| 23493 chr1 manual_curation polypeptide 34753556 34755623 . - . ID=GSCOCP00016322001;Dbxref=InterPro:IPR001087,PFAM:PF00657,SwissProt:Q8LB81,SwissProt:Q9M8Y5,SwissProt:Q9SVU5,TAIR:AT3G04290.1,TAIR:AT4G28780.1,TAIR:AT5G33370.1,TrEMBL:B9GR99,TrEMBL:B9S7Q1,TrEMBL:I1JRU5;Derives_from=GSCOCT00016322001;Name=Cc01_g17460;Ontology_term=CC_evidence_code:ISS,GO:0006629,CC_EC_number:missing_EC_number,PRODUCT:GDSL esterase/lipase At4g28780,CC_functional_completeness:complete,CC_gene:At4g28780,CC_gene:At5g33370,CC_gene:LTL1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016322001~ GDSL esterase/lipase At4g28780~ At4g28780~ complete;original_location=join(2495568..2495817%2C2495929..2496056%2C2496434..2496676%2C2496971..2497223%2C2497403..2497635);owner=coffea | |
| 23494 chr1 manual_curation exon 34755374 34755816 . - . Parent=GSCOCT00016322001 | |
| 23495 chr1 manual_curation exon 34755135 34755262 . - . Parent=GSCOCT00016322001 | |
| 23496 chr1 manual_curation exon 34754515 34754757 . - . Parent=GSCOCT00016322001 | |
| 23497 chr1 manual_curation exon 34753968 34754220 . - . Parent=GSCOCT00016322001 | |
| 23498 chr1 manual_curation exon 34753311 34753788 . - . Parent=GSCOCT00016322001 | |
| 23499 chr1 manual_curation CDS 34755374 34755623 . - 0 Parent=GSCOCT00016322001 | |
| 23500 chr1 manual_curation CDS 34755135 34755262 . - 1 Parent=GSCOCT00016322001 | |
| 23501 chr1 manual_curation CDS 34754515 34754757 . - 0 Parent=GSCOCT00016322001 | |
| 23502 chr1 manual_curation CDS 34753968 34754220 . - 0 Parent=GSCOCT00016322001 | |
| 23503 chr1 manual_curation CDS 34753556 34753788 . - 1 Parent=GSCOCT00016322001 | |
| 23504 chr1 manual_curation gene 34764722 34766528 . + . ID=GSCOCG00016321001;Name=Cc01_g17470 | |
| 23505 chr1 manual_curation mRNA 34764722 34766528 . + . ID=GSCOCT00016321001;Parent=GSCOCG00016321001;Name=Cc01_g17470 | |
| 23506 chr1 manual_curation polypeptide 34764819 34766528 . + . ID=GSCOCP00016321001;Dbxref=InterPro:IPR018499,PFAM:PF00335,TAIR:AT2G20230.1,TAIR:AT2G20740.1,TAIR:AT4G28770.2,TrEMBL:B7FJR9,TrEMBL:D7L5A2,TrEMBL:D7U3B8;Derives_from=GSCOCT00016321001;Name=Cc01_g17470;Ontology_term=CC_evidence_code:ISS,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Tetraspanin family protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016321001~ Tetraspanin family protein~ unknown_gene~ fragment;original_location=complement(join(2486059..2486372%2C2485639..2485738%2C2484903..2484983%2C2484663..2484821));owner=coffea | |
| 23507 chr1 manual_curation exon 34766370 34766528 . + . Parent=GSCOCT00016321001 | |
| 23508 chr1 manual_curation exon 34766208 34766288 . + . Parent=GSCOCT00016321001 | |
| 23509 chr1 manual_curation exon 34765453 34765552 . + . Parent=GSCOCT00016321001 | |
| 23510 chr1 manual_curation exon 34764722 34765132 . + . Parent=GSCOCT00016321001 | |
| 23511 chr1 manual_curation CDS 34766370 34766528 . + 0 Parent=GSCOCT00016321001 | |
| 23512 chr1 manual_curation CDS 34766208 34766288 . + 0 Parent=GSCOCT00016321001 | |
| 23513 chr1 manual_curation CDS 34765453 34765552 . + 2 Parent=GSCOCT00016321001 | |
| 23514 chr1 manual_curation CDS 34764819 34765132 . + 0 Parent=GSCOCT00016321001 | |
| 23515 chr1 manual_curation gene 34766816 34768233 . + . ID=GSCOCG00016320001;Name=Cc01_g17480 | |
| 23516 chr1 manual_curation mRNA 34766816 34768233 . + . ID=GSCOCT00016320001;Parent=GSCOCG00016320001;Name=Cc01_g17480 | |
| 23517 chr1 manual_curation polypeptide 34766816 34768233 . + . ID=GSCOCP00016320001;Dbxref=TrEMBL:B7FJR9,TrEMBL:D7U3B8,TrEMBL:I1LYS6;Derives_from=GSCOCT00016320001;Name=Cc01_g17480;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016320001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(2484367..2484375%2C2483714..2483914%2C2482958..2483035));owner=coffea | |
| 23518 chr1 manual_curation exon 34768156 34768233 . + . Parent=GSCOCT00016320001 | |
| 23519 chr1 manual_curation exon 34767277 34767477 . + . Parent=GSCOCT00016320001 | |
| 23520 chr1 manual_curation exon 34766816 34766824 . + . Parent=GSCOCT00016320001 | |
| 23521 chr1 manual_curation CDS 34768156 34768233 . + 0 Parent=GSCOCT00016320001 | |
| 23522 chr1 manual_curation CDS 34767277 34767477 . + 0 Parent=GSCOCT00016320001 | |
| 23523 chr1 manual_curation CDS 34766816 34766824 . + 0 Parent=GSCOCT00016320001 | |
| 23524 chr1 manual_curation gene 34770240 34776496 . - . ID=GSCOCG00016318001;Name=Cc01_g17490 | |
| 23525 chr1 manual_curation mRNA 34770240 34776496 . - . ID=GSCOCT00016318001;Parent=GSCOCG00016318001;Name=Cc01_g17490 | |
| 23526 chr1 manual_curation polypeptide 34770781 34774836 . - . ID=GSCOCP00016318001;Dbxref=InterPro:IPR022212,PFAM:PF12552,TAIR:AT2G20240.1,TAIR:AT4G28760.1,TAIR:AT5G43880.1,TrEMBL:B9GRA1,TrEMBL:B9S589,TrEMBL:F6HZU5;Derives_from=GSCOCT00016318001;Name=Cc01_g17490;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of unknown function (DUF3741),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016318001~ Putative Protein of unknown function (DUF3741)~ unknown_gene~ complete;original_location=join(2476355..2476493%2C2476999..2477075%2C2477162..2479012%2C2479434..2479587%2C2479680..2480114%2C2480178..2480410);owner=coffea | |
| 23527 chr1 manual_curation exon 34774698 34776496 . - . Parent=GSCOCT00016318001 | |
| 23528 chr1 manual_curation exon 34774116 34774192 . - . Parent=GSCOCT00016318001 | |
| 23529 chr1 manual_curation exon 34772179 34774029 . - . Parent=GSCOCT00016318001 | |
| 23530 chr1 manual_curation exon 34771604 34771757 . - . Parent=GSCOCT00016318001 | |
| 23531 chr1 manual_curation exon 34771077 34771511 . - . Parent=GSCOCT00016318001 | |
| 23532 chr1 manual_curation exon 34770240 34771013 . - . Parent=GSCOCT00016318001 | |
| 23533 chr1 manual_curation CDS 34774698 34774836 . - 0 Parent=GSCOCT00016318001 | |
| 23534 chr1 manual_curation CDS 34774116 34774192 . - 1 Parent=GSCOCT00016318001 | |
| 23535 chr1 manual_curation CDS 34772179 34774029 . - 0 Parent=GSCOCT00016318001 | |
| 23536 chr1 manual_curation CDS 34771604 34771757 . - 0 Parent=GSCOCT00016318001 | |
| 23537 chr1 manual_curation CDS 34771077 34771511 . - 1 Parent=GSCOCT00016318001 | |
| 23538 chr1 manual_curation CDS 34770781 34771013 . - 1 Parent=GSCOCT00016318001 | |
| 23539 chr1 manual_curation gene 34787256 34788523 . + . ID=GSCOCG00016317001;Name=Cc01_g17500 | |
| 23540 chr1 manual_curation mRNA 34787256 34788523 . + . ID=GSCOCT00016317001;Parent=GSCOCG00016317001;Name=Cc01_g17500 | |
| 23541 chr1 manual_curation polypeptide 34787503 34788376 . + . ID=GSCOCP00016317001;Dbxref=InterPro:IPR003375,InterPro:IPR008990,PFAM:PF02427,PRODOM:PD004772,SUPERFAMILY:SSF50090,SwissProt:P12354,SwissProt:Q41228,SwissProt:Q41229,TAIR:AT2G20260.1,TAIR:AT4G28750.1,TrEMBL:B7FHF6,TrEMBL:B9GRA3,TrEMBL:G7KZJ5;Derives_from=GSCOCT00016317001;Name=Cc01_g17500;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0009536,GO:0009538,GO:0015979,CC_EC_number:missing_EC_number,PRODUCT:Photosystem I reaction center subunit IV A%2C chloroplastic,CC_functional_completeness:complete,CC_gene:PSAEA,CC_gene:PSAEB,CC_gene:PSAE-1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016317001~ Photosystem I reaction center subunit IV A%2C chloroplastic~ PSAEA~ complete;original_location=complement(join(2463425..2463688%2C2463024..2463089%2C2462815..2462919));owner=coffea | |
| 23542 chr1 manual_curation exon 34788272 34788523 . + . Parent=GSCOCT00016317001 | |
| 23543 chr1 manual_curation exon 34788102 34788167 . + . Parent=GSCOCT00016317001 | |
| 23544 chr1 manual_curation exon 34787256 34787766 . + . Parent=GSCOCT00016317001 | |
| 23545 chr1 manual_curation CDS 34788272 34788376 . + 0 Parent=GSCOCT00016317001 | |
| 23546 chr1 manual_curation CDS 34788102 34788167 . + 0 Parent=GSCOCT00016317001 | |
| 23547 chr1 manual_curation CDS 34787503 34787766 . + 0 Parent=GSCOCT00016317001 | |
| 23548 chr1 manual_curation gene 34789655 34792876 . - . ID=GSCOCG00016315001;Name=Cc01_g17510 | |
| 23549 chr1 manual_curation mRNA 34789655 34792876 . - . ID=GSCOCT00016315001;Parent=GSCOCG00016315001;Name=Cc01_g17510 | |
| 23550 chr1 manual_curation polypeptide 34790312 34792589 . - . ID=GSCOCP00016315001;Dbxref=InterPro:IPR021883,PFAM:PF11998,TAIR:AT1G02910.1,TAIR:AT4G28740.1,TrEMBL:B9IBD7,TrEMBL:F6HZU3,TrEMBL:I1LYR9;Derives_from=GSCOCT00016315001;Name=Cc01_g17510;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016315001~ FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3493 (InterPro:IPR021883)%3B BEST Arabidopsis thaliana protein match is: tetratricopeptide repeat (TPR)-containing protein (TAIR:AT1G02910.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(2458602..2458816%2C2459718..2460290%2C2460447..2460497%2C2460738..2460879);owner=coffea | |
| 23551 chr1 manual_curation exon 34789655 34790168 . - . Parent=GSCOCT00016315001 | |
| 23552 chr1 manual_curation exon 34792375 34792876 . - . Parent=GSCOCT00016315001 | |
| 23553 chr1 manual_curation exon 34790901 34791473 . - . Parent=GSCOCT00016315001 | |
| 23554 chr1 manual_curation exon 34790694 34790744 . - . Parent=GSCOCT00016315001 | |
| 23555 chr1 manual_curation exon 34790307 34790453 . - . Parent=GSCOCT00016315001 | |
| 23556 chr1 manual_curation CDS 34792375 34792589 . - 0 Parent=GSCOCT00016315001 | |
| 23557 chr1 manual_curation CDS 34790901 34791473 . - 2 Parent=GSCOCT00016315001 | |
| 23558 chr1 manual_curation CDS 34790694 34790744 . - 2 Parent=GSCOCT00016315001 | |
| 23559 chr1 manual_curation CDS 34790312 34790453 . - 2 Parent=GSCOCT00016315001 | |
| 23560 chr1 manual_curation gene 34793655 34796499 . - . ID=GSCOCG00016314001;Name=Cc01_g17520 | |
| 23561 chr1 manual_curation mRNA 34793655 34796499 . - . ID=GSCOCT00016314001;Parent=GSCOCG00016314001;Name=Cc01_g17520 | |
| 23562 chr1 manual_curation polypeptide 34793807 34796187 . - . ID=GSCOCP00016314001;Dbxref=GENE3D:G3DSA:3.40.30.10,InterPro:IPR002109,InterPro:IPR011899,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR014025,PFAM:PF00462,PRINTS:PR00160,PROFILE:PS51354,SUPERFAMILY:SSF52833,SwissProt:Q0J3L4,SwissProt:Q8GWS0,SwissProt:Q8LBS4,TAIR:AT2G20270.2,TAIR:AT4G28730.1,TAIR:AT5G63030.1,TIGRFAMs:TIGR02180,TrEMBL:B4UW61,TrEMBL:C6SX42,TrEMBL:F6HZT9;Derives_from=GSCOCT00016314001;Name=Cc01_g17520;Ontology_term=CC_evidence_code:ISS,GO:0009055,GO:0015035,GO:0045454,CC_EC_number:missing_EC_number,PRODUCT:Glutaredoxin-C5%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:GRXC5,CC_gene:GRXS10,CC_gene:GRXS12;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016314001~ Glutaredoxin-C5%2C chloroplastic~ GRXC5~ fragment;original_location=join(2455004..2455017%2C2455075..2455137%2C2455246..2455319%2C2456211..2456285%2C2456676..2456702%2C2457308..2457384);owner=coffea | |
| 23563 chr1 manual_curation exon 34796174 34796499 . - . Parent=GSCOCT00016314001 | |
| 23564 chr1 manual_curation exon 34796054 34796116 . - . Parent=GSCOCT00016314001 | |
| 23565 chr1 manual_curation exon 34795872 34795945 . - . Parent=GSCOCT00016314001 | |
| 23566 chr1 manual_curation exon 34794906 34794980 . - . Parent=GSCOCT00016314001 | |
| 23567 chr1 manual_curation exon 34794489 34794515 . - . Parent=GSCOCT00016314001 | |
| 23568 chr1 manual_curation exon 34793655 34793883 . - . Parent=GSCOCT00016314001 | |
| 23569 chr1 manual_curation CDS 34796174 34796187 . - 0 Parent=GSCOCT00016314001 | |
| 23570 chr1 manual_curation CDS 34796054 34796116 . - 2 Parent=GSCOCT00016314001 | |
| 23571 chr1 manual_curation CDS 34795872 34795945 . - 2 Parent=GSCOCT00016314001 | |
| 23572 chr1 manual_curation CDS 34794906 34794980 . - 1 Parent=GSCOCT00016314001 | |
| 23573 chr1 manual_curation CDS 34794489 34794515 . - 1 Parent=GSCOCT00016314001 | |
| 23574 chr1 manual_curation CDS 34793807 34793883 . - 1 Parent=GSCOCT00016314001 | |
| 23575 chr1 manual_curation gene 34801375 34803126 . - . ID=GSCOCG00016313001;Name=Cc01_g17530 | |
| 23576 chr1 manual_curation mRNA 34801375 34803126 . - . ID=GSCOCT00016313001;Parent=GSCOCG00016313001;Name=Cc01_g17530 | |
| 23577 chr1 manual_curation polypeptide 34801637 34803126 . - . ID=GSCOCP00016313001;Dbxref=InterPro:IPR000103,InterPro:IPR013027,InterPro:IPR020946,PFAM:PF00743,PRINTS:PR00368,PRINTS:PR00469,SwissProt:O64489,SwissProt:Q9LKC0,SwissProt:Q9SVU0,TAIR:AT1G04180.1,TAIR:AT4G28720.1,TAIR:AT5G43890.1,TrEMBL:B9GRA6,TrEMBL:D2IGV4,TrEMBL:H2EI28;Derives_from=GSCOCT00016313001;Name=Cc01_g17530;Ontology_term=CC_evidence_code:ISS,GO:0004499,GO:0016491,GO:0050660,GO:0050661,GO:0055114,CC_EC_number:1.14.13.8,CC_EC_number:1.14.13.8,PRODUCT:Flavin-containing monooxygenase YUCCA8,CC_functional_completeness:complete,CC_gene:YUC8,CC_gene:YUC9,CC_gene:YUC5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016313001~ Flavin-containing monooxygenase YUCCA8~ YUC8~ complete;original_location=join(2448065..2448724%2C2448827..2449198%2C2449330..2449554);owner=coffea | |
| 23578 chr1 manual_curation exon 34802467 34803126 . - . Parent=GSCOCT00016313001 | |
| 23579 chr1 manual_curation exon 34801993 34802364 . - . Parent=GSCOCT00016313001 | |
| 23580 chr1 manual_curation exon 34801375 34801861 . - . Parent=GSCOCT00016313001 | |
| 23581 chr1 manual_curation CDS 34802467 34803126 . - 0 Parent=GSCOCT00016313001 | |
| 23582 chr1 manual_curation CDS 34801993 34802364 . - 0 Parent=GSCOCT00016313001 | |
| 23583 chr1 manual_curation CDS 34801637 34801861 . - 0 Parent=GSCOCT00016313001 | |
| 23584 chr1 manual_curation gene 34819373 34836628 . - . ID=GSCOCG00016310001;Name=Cc01_g17540 | |
| 23585 chr1 manual_curation mRNA 34819373 34836628 . - . ID=GSCOCT00016310001;Parent=GSCOCG00016310001;Name=Cc01_g17540 | |
| 23586 chr1 manual_curation polypeptide 34819785 34836628 . - . ID=GSCOCP00016310001;Dbxref=InterPro:IPR000048,InterPro:IPR001609,InterPro:IPR002710,InterPro:IPR004009,InterPro:IPR018444,PFAM:PF00063,PFAM:PF00612,PFAM:PF01843,PFAM:PF02736,PRINTS:PR00193,PROFILE:PS50096,PROFILE:PS51126,SMART:SM00015,SMART:SM00242,SwissProt:P54697,SwissProt:Q99104,SwissProt:Q9QYF3,TAIR:AT1G04160.1,TAIR:AT4G28710.1,TAIR:AT5G43900.3,TrEMBL:B0CN59,TrEMBL:B9GRA7,TrEMBL:F6HZT6;Derives_from=GSCOCT00016310001;Name=Cc01_g17540;Ontology_term=CC_evidence_code:ISS,GO:0003774,GO:0005524,GO:0016459,CC_EC_number:missing_EC_number,PRODUCT:Putative Myosin-J heavy chain,CC_functional_completeness:fragment,CC_gene:myoJ,CC_gene:Myo5a;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016310001~ Putative Myosin-J heavy chain~ myoJ~ fragment;original_location=join(2414563..2414706%2C2414902..2415045%2C2415159..2415304%2C2415384..2415540%2C2415677..2415735%2C2415834..2415993%2C2418363..2418512%2C2418596..2418732%2C2418830..2418976%2C2419624..2419725%2C2420366..2420423%2C2420509..2420610%2C2420728..2420751%2C2420979..2421016%2C2421173..2421299%2C2421467..2421637%2C2421717..2421848%2C2421938..2422047%2C2422126..2422186%2C2423735..2423912%2C2424001..2424206%2C2424418..2424537%2C2425213..2425311%2C2425902..2426114%2C2426199..2426338%2C2426475..2426586%2C2426670..2426714%2C2426812..2426892%2C2426987..2427157%2C2427950..2428105%2C2428231..2428419%2C2428958..2429086%2C2429163..2429233%2C2429317..2429416%2C2429562..2429618%2C2430445..2430501%2C2430657..2430737%2C2430849..2430931%2C2431292..2431406);owner=coffea | |
| 23587 chr1 manual_curation exon 34836485 34836628 . - . Parent=GSCOCT00016310001 | |
| 23588 chr1 manual_curation exon 34836146 34836289 . - . Parent=GSCOCT00016310001 | |
| 23589 chr1 manual_curation exon 34835887 34836032 . - . Parent=GSCOCT00016310001 | |
| 23590 chr1 manual_curation exon 34835651 34835807 . - . Parent=GSCOCT00016310001 | |
| 23591 chr1 manual_curation exon 34835456 34835514 . - . Parent=GSCOCT00016310001 | |
| 23592 chr1 manual_curation exon 34835198 34835357 . - . Parent=GSCOCT00016310001 | |
| 23593 chr1 manual_curation exon 34832679 34832828 . - . Parent=GSCOCT00016310001 | |
| 23594 chr1 manual_curation exon 34832459 34832595 . - . Parent=GSCOCT00016310001 | |
| 23595 chr1 manual_curation exon 34832215 34832361 . - . Parent=GSCOCT00016310001 | |
| 23596 chr1 manual_curation exon 34831466 34831567 . - . Parent=GSCOCT00016310001 | |
| 23597 chr1 manual_curation exon 34830768 34830825 . - . Parent=GSCOCT00016310001 | |
| 23598 chr1 manual_curation exon 34830581 34830682 . - . Parent=GSCOCT00016310001 | |
| 23599 chr1 manual_curation exon 34830440 34830463 . - . Parent=GSCOCT00016310001 | |
| 23600 chr1 manual_curation exon 34830175 34830212 . - . Parent=GSCOCT00016310001 | |
| 23601 chr1 manual_curation exon 34829892 34830018 . - . Parent=GSCOCT00016310001 | |
| 23602 chr1 manual_curation exon 34829554 34829724 . - . Parent=GSCOCT00016310001 | |
| 23603 chr1 manual_curation exon 34829343 34829474 . - . Parent=GSCOCT00016310001 | |
| 23604 chr1 manual_curation exon 34829144 34829253 . - . Parent=GSCOCT00016310001 | |
| 23605 chr1 manual_curation exon 34829005 34829065 . - . Parent=GSCOCT00016310001 | |
| 23606 chr1 manual_curation exon 34827279 34827456 . - . Parent=GSCOCT00016310001 | |
| 23607 chr1 manual_curation exon 34826985 34827190 . - . Parent=GSCOCT00016310001 | |
| 23608 chr1 manual_curation exon 34826654 34826773 . - . Parent=GSCOCT00016310001 | |
| 23609 chr1 manual_curation exon 34825880 34825978 . - . Parent=GSCOCT00016310001 | |
| 23610 chr1 manual_curation exon 34825077 34825289 . - . Parent=GSCOCT00016310001 | |
| 23611 chr1 manual_curation exon 34824853 34824992 . - . Parent=GSCOCT00016310001 | |
| 23612 chr1 manual_curation exon 34824605 34824716 . - . Parent=GSCOCT00016310001 | |
| 23613 chr1 manual_curation exon 34824477 34824521 . - . Parent=GSCOCT00016310001 | |
| 23614 chr1 manual_curation exon 34824299 34824379 . - . Parent=GSCOCT00016310001 | |
| 23615 chr1 manual_curation exon 34824034 34824204 . - . Parent=GSCOCT00016310001 | |
| 23616 chr1 manual_curation exon 34823086 34823241 . - . Parent=GSCOCT00016310001 | |
| 23617 chr1 manual_curation exon 34822772 34822960 . - . Parent=GSCOCT00016310001 | |
| 23618 chr1 manual_curation exon 34822105 34822233 . - . Parent=GSCOCT00016310001 | |
| 23619 chr1 manual_curation exon 34821958 34822028 . - . Parent=GSCOCT00016310001 | |
| 23620 chr1 manual_curation exon 34821775 34821874 . - . Parent=GSCOCT00016310001 | |
| 23621 chr1 manual_curation exon 34821573 34821629 . - . Parent=GSCOCT00016310001 | |
| 23622 chr1 manual_curation exon 34820690 34820746 . - . Parent=GSCOCT00016310001 | |
| 23623 chr1 manual_curation exon 34820454 34820534 . - . Parent=GSCOCT00016310001 | |
| 23624 chr1 manual_curation exon 34820260 34820342 . - . Parent=GSCOCT00016310001 | |
| 23625 chr1 manual_curation exon 34819373 34819899 . - . Parent=GSCOCT00016310001 | |
| 23626 chr1 manual_curation CDS 34836485 34836628 . - 0 Parent=GSCOCT00016310001 | |
| 23627 chr1 manual_curation CDS 34836146 34836289 . - 0 Parent=GSCOCT00016310001 | |
| 23628 chr1 manual_curation CDS 34835887 34836032 . - 0 Parent=GSCOCT00016310001 | |
| 23629 chr1 manual_curation CDS 34835651 34835807 . - 2 Parent=GSCOCT00016310001 | |
| 23630 chr1 manual_curation CDS 34835456 34835514 . - 0 Parent=GSCOCT00016310001 | |
| 23631 chr1 manual_curation CDS 34835198 34835357 . - 2 Parent=GSCOCT00016310001 | |
| 23632 chr1 manual_curation CDS 34832679 34832828 . - 0 Parent=GSCOCT00016310001 | |
| 23633 chr1 manual_curation CDS 34832459 34832595 . - 0 Parent=GSCOCT00016310001 | |
| 23634 chr1 manual_curation CDS 34832215 34832361 . - 2 Parent=GSCOCT00016310001 | |
| 23635 chr1 manual_curation CDS 34831466 34831567 . - 2 Parent=GSCOCT00016310001 | |
| 23636 chr1 manual_curation CDS 34830768 34830825 . - 2 Parent=GSCOCT00016310001 | |
| 23637 chr1 manual_curation CDS 34830581 34830682 . - 0 Parent=GSCOCT00016310001 | |
| 23638 chr1 manual_curation CDS 34830440 34830463 . - 0 Parent=GSCOCT00016310001 | |
| 23639 chr1 manual_curation CDS 34830175 34830212 . - 0 Parent=GSCOCT00016310001 | |
| 23640 chr1 manual_curation CDS 34829892 34830018 . - 2 Parent=GSCOCT00016310001 | |
| 23641 chr1 manual_curation CDS 34829554 34829724 . - 0 Parent=GSCOCT00016310001 | |
| 23642 chr1 manual_curation CDS 34829343 34829474 . - 0 Parent=GSCOCT00016310001 | |
| 23643 chr1 manual_curation CDS 34829144 34829253 . - 0 Parent=GSCOCT00016310001 | |
| 23644 chr1 manual_curation CDS 34829005 34829065 . - 2 Parent=GSCOCT00016310001 | |
| 23645 chr1 manual_curation CDS 34827279 34827456 . - 0 Parent=GSCOCT00016310001 | |
| 23646 chr1 manual_curation CDS 34826985 34827190 . - 1 Parent=GSCOCT00016310001 | |
| 23647 chr1 manual_curation CDS 34826654 34826773 . - 0 Parent=GSCOCT00016310001 | |
| 23648 chr1 manual_curation CDS 34825880 34825978 . - 0 Parent=GSCOCT00016310001 | |
| 23649 chr1 manual_curation CDS 34825077 34825289 . - 0 Parent=GSCOCT00016310001 | |
| 23650 chr1 manual_curation CDS 34824853 34824992 . - 0 Parent=GSCOCT00016310001 | |
| 23651 chr1 manual_curation CDS 34824605 34824716 . - 2 Parent=GSCOCT00016310001 | |
| 23652 chr1 manual_curation CDS 34824477 34824521 . - 0 Parent=GSCOCT00016310001 | |
| 23653 chr1 manual_curation CDS 34824299 34824379 . - 0 Parent=GSCOCT00016310001 | |
| 23654 chr1 manual_curation CDS 34824034 34824204 . - 0 Parent=GSCOCT00016310001 | |
| 23655 chr1 manual_curation CDS 34823086 34823241 . - 0 Parent=GSCOCT00016310001 | |
| 23656 chr1 manual_curation CDS 34822772 34822960 . - 0 Parent=GSCOCT00016310001 | |
| 23657 chr1 manual_curation CDS 34822105 34822233 . - 0 Parent=GSCOCT00016310001 | |
| 23658 chr1 manual_curation CDS 34821958 34822028 . - 0 Parent=GSCOCT00016310001 | |
| 23659 chr1 manual_curation CDS 34821775 34821874 . - 2 Parent=GSCOCT00016310001 | |
| 23660 chr1 manual_curation CDS 34821573 34821629 . - 0 Parent=GSCOCT00016310001 | |
| 23661 chr1 manual_curation CDS 34820690 34820746 . - 0 Parent=GSCOCT00016310001 | |
| 23662 chr1 manual_curation CDS 34820454 34820534 . - 0 Parent=GSCOCT00016310001 | |
| 23663 chr1 manual_curation CDS 34820260 34820342 . - 0 Parent=GSCOCT00016310001 | |
| 23664 chr1 manual_curation CDS 34819785 34819899 . - 2 Parent=GSCOCT00016310001 | |
| 23665 chr1 manual_curation gene 34853337 34856396 . + . ID=GSCOCG00016308001;Name=Cc01_g17550 | |
| 23666 chr1 manual_curation mRNA 34853337 34856396 . + . ID=GSCOCT00016308001;Parent=GSCOCG00016308001;Name=Cc01_g17550 | |
| 23667 chr1 manual_curation polypeptide 34853337 34856396 . + . ID=GSCOCP00016308001;Dbxref=InterPro:IPR000008,InterPro:IPR008973,InterPro:IPR013583,InterPro:IPR018029,PFAM:PF00168,PFAM:PF08372,PROFILE:PS50004,SMART:SM00239,SUPERFAMILY:SSF49562,TAIR:AT1G04150.1,TAIR:AT4G11610.1,TAIR:AT5G48060.1,TrEMBL:A5BG07,TrEMBL:B9GRA8,TrEMBL:F6HZT4;Derives_from=GSCOCT00016308001;Name=Cc01_g17550;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:C2 calcium/lipid-binding plant phosphoribosyltransferase family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016308001~ C2 calcium/lipid-binding plant phosphoribosyltransferase family protein~ unknown_gene~ complete;original_location=complement(2394795..2397854);owner=coffea | |
| 23668 chr1 manual_curation exon 34853337 34856396 . + . Parent=GSCOCT00016308001 | |
| 23669 chr1 manual_curation CDS 34853337 34856396 . + 0 Parent=GSCOCT00016308001 | |
| 23670 chr1 manual_curation gene 34856667 34859166 . - . ID=GSCOCG00016307001;Name=Cc01_g17560 | |
| 23671 chr1 manual_curation mRNA 34856667 34859166 . - . ID=GSCOCT00016307001;Parent=GSCOCG00016307001;Name=Cc01_g17560 | |
| 23672 chr1 manual_curation polypeptide 34856946 34859166 . - . ID=GSCOCP00016307001;Dbxref=InterPro:IPR011611,PFAM:PF00294,TAIR:AT4G28706.4,TAIR:AT5G43910.2,TrEMBL:B9GRA9,TrEMBL:B9T5V5,TrEMBL:D7U3A6;Derives_from=GSCOCT00016307001;Name=Cc01_g17560;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016307001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(2392025..2392061%2C2392132..2392226%2C2392307..2392433%2C2392587..2392684%2C2393336..2393474%2C2393968..2394020%2C2394135..2394245);owner=coffea | |
| 23673 chr1 manual_curation exon 34859130 34859166 . - . Parent=GSCOCT00016307001 | |
| 23674 chr1 manual_curation exon 34858965 34859059 . - . Parent=GSCOCT00016307001 | |
| 23675 chr1 manual_curation exon 34858758 34858884 . - . Parent=GSCOCT00016307001 | |
| 23676 chr1 manual_curation exon 34858507 34858604 . - . Parent=GSCOCT00016307001 | |
| 23677 chr1 manual_curation exon 34857717 34857855 . - . Parent=GSCOCT00016307001 | |
| 23678 chr1 manual_curation exon 34857171 34857223 . - . Parent=GSCOCT00016307001 | |
| 23679 chr1 manual_curation exon 34856667 34857056 . - . Parent=GSCOCT00016307001 | |
| 23680 chr1 manual_curation CDS 34859130 34859166 . - 0 Parent=GSCOCT00016307001 | |
| 23681 chr1 manual_curation CDS 34858965 34859059 . - 1 Parent=GSCOCT00016307001 | |
| 23682 chr1 manual_curation CDS 34858758 34858884 . - 0 Parent=GSCOCT00016307001 | |
| 23683 chr1 manual_curation CDS 34858507 34858604 . - 1 Parent=GSCOCT00016307001 | |
| 23684 chr1 manual_curation CDS 34857717 34857855 . - 0 Parent=GSCOCT00016307001 | |
| 23685 chr1 manual_curation CDS 34857171 34857223 . - 1 Parent=GSCOCT00016307001 | |
| 23686 chr1 manual_curation CDS 34856946 34857056 . - 0 Parent=GSCOCT00016307001 | |
| 23687 chr1 manual_curation gene 34859349 34862551 . - . ID=GSCOCG00016306001;Name=Cc01_g17570 | |
| 23688 chr1 manual_curation mRNA 34859349 34862551 . - . ID=GSCOCT00016306001;Parent=GSCOCG00016306001;Name=Cc01_g17570 | |
| 23689 chr1 manual_curation polypeptide 34859416 34862489 . - . ID=GSCOCP00016306001;Dbxref=InterPro:IPR011611,PFAM:PF00294,TAIR:AT4G28706.4,TAIR:AT5G43910.2,TrEMBL:A9NTY9,TrEMBL:B9FYL3,TrEMBL:Q6Z1P3;Derives_from=GSCOCT00016306001;Name=Cc01_g17570;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.7.1.3,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016306001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(2388702..2388844%2C2388957..2389038%2C2389118..2389207%2C2389437..2389514%2C2389603..2389677%2C2390718..2390770%2C2391305..2391455%2C2391635..2391775);owner=coffea | |
| 23690 chr1 manual_curation exon 34862347 34862551 . - . Parent=GSCOCT00016306001 | |
| 23691 chr1 manual_curation exon 34862153 34862234 . - . Parent=GSCOCT00016306001 | |
| 23692 chr1 manual_curation exon 34861984 34862073 . - . Parent=GSCOCT00016306001 | |
| 23693 chr1 manual_curation exon 34861677 34861754 . - . Parent=GSCOCT00016306001 | |
| 23694 chr1 manual_curation exon 34861514 34861588 . - . Parent=GSCOCT00016306001 | |
| 23695 chr1 manual_curation exon 34860421 34860473 . - . Parent=GSCOCT00016306001 | |
| 23696 chr1 manual_curation exon 34859736 34859886 . - . Parent=GSCOCT00016306001 | |
| 23697 chr1 manual_curation exon 34859349 34859556 . - . Parent=GSCOCT00016306001 | |
| 23698 chr1 manual_curation CDS 34862347 34862489 . - 0 Parent=GSCOCT00016306001 | |
| 23699 chr1 manual_curation CDS 34862153 34862234 . - 2 Parent=GSCOCT00016306001 | |
| 23700 chr1 manual_curation CDS 34861984 34862073 . - 0 Parent=GSCOCT00016306001 | |
| 23701 chr1 manual_curation CDS 34861677 34861754 . - 0 Parent=GSCOCT00016306001 | |
| 23702 chr1 manual_curation CDS 34861514 34861588 . - 0 Parent=GSCOCT00016306001 | |
| 23703 chr1 manual_curation CDS 34860421 34860473 . - 0 Parent=GSCOCT00016306001 | |
| 23704 chr1 manual_curation CDS 34859736 34859886 . - 2 Parent=GSCOCT00016306001 | |
| 23705 chr1 manual_curation CDS 34859416 34859556 . - 0 Parent=GSCOCT00016306001 | |
| 23706 chr1 manual_curation gene 34865560 34869570 . + . ID=GSCOCG00016304001;Name=Cc01_g17580 | |
| 23707 chr1 manual_curation mRNA 34865560 34869570 . + . ID=GSCOCT00016304001;Parent=GSCOCG00016304001;Name=Cc01_g17580 | |
| 23708 chr1 manual_curation polypeptide 34865560 34869570 . + . ID=GSCOCP00016304001;Dbxref=InterPro:IPR000008,InterPro:IPR008973,PFAM:PF00168,SMART:SM00239,SUPERFAMILY:SSF49562,TAIR:AT1G51570.1,TAIR:AT3G57880.1,TAIR:AT5G48060.1,TrEMBL:A5BG07,TrEMBL:B9T5V4,TrEMBL:F6HZT4;Derives_from=GSCOCT00016304001;Name=Cc01_g17580;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016304001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(2385355..2385631%2C2385049..2385095%2C2381621..2381761));owner=coffea | |
| 23709 chr1 manual_curation exon 34869430 34869570 . + . Parent=GSCOCT00016304001 | |
| 23710 chr1 manual_curation exon 34866096 34866142 . + . Parent=GSCOCT00016304001 | |
| 23711 chr1 manual_curation exon 34865560 34865836 . + . Parent=GSCOCT00016304001 | |
| 23712 chr1 manual_curation CDS 34869430 34869570 . + 0 Parent=GSCOCT00016304001 | |
| 23713 chr1 manual_curation CDS 34866096 34866142 . + 1 Parent=GSCOCT00016304001 | |
| 23714 chr1 manual_curation CDS 34865560 34865836 . + 0 Parent=GSCOCT00016304001 | |
| 23715 chr1 manual_curation gene 34871030 34871734 . + . ID=GSCOCG00016303001;Name=Cc01_g17590 | |
| 23716 chr1 manual_curation mRNA 34871030 34871734 . + . ID=GSCOCT00016303001;Parent=GSCOCG00016303001;Name=Cc01_g17590 | |
| 23717 chr1 manual_curation polypeptide 34871030 34871734 . + . ID=GSCOCP00016303001;Dbxref=InterPro:IPR013583,PFAM:PF08372,TAIR:AT1G04150.1,TAIR:AT5G12970.1,TAIR:AT5G48060.1,TrEMBL:A5BG07,TrEMBL:B9GRA8,TrEMBL:B9T5V4;Derives_from=GSCOCT00016303001;Name=Cc01_g17590;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016303001~ Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein~ unknown_gene~ fragment;original_location=complement(2379457..2380161);owner=coffea | |
| 23718 chr1 manual_curation exon 34871030 34871734 . + . Parent=GSCOCT00016303001 | |
| 23719 chr1 manual_curation CDS 34871030 34871734 . + 0 Parent=GSCOCT00016303001 | |
| 23720 chr1 manual_curation gene 34872030 34873954 . - . ID=GSCOCG00016302001;Name=Cc01_g17600 | |
| 23721 chr1 manual_curation mRNA 34872030 34873954 . - . ID=GSCOCT00016302001;Parent=GSCOCG00016302001;Name=Cc01_g17600 | |
| 23722 chr1 manual_curation polypeptide 34872206 34873954 . - . ID=GSCOCP00016302001;Dbxref=InterPro:IPR011611,PFAM:PF00294,TAIR:AT4G28706.4,TAIR:AT5G43910.2,TrEMBL:B9T5V5,TrEMBL:F4JM15,TrEMBL:Q8VZA8;Derives_from=GSCOCT00016302001;Name=Cc01_g17600;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016302001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(2377237..2377452%2C2378100..2378238%2C2378711..2378763%2C2378875..2378985);owner=coffea | |
| 23723 chr1 manual_curation exon 34873739 34873954 . - . Parent=GSCOCT00016302001 | |
| 23724 chr1 manual_curation exon 34872953 34873091 . - . Parent=GSCOCT00016302001 | |
| 23725 chr1 manual_curation exon 34872428 34872480 . - . Parent=GSCOCT00016302001 | |
| 23726 chr1 manual_curation exon 34872030 34872316 . - . Parent=GSCOCT00016302001 | |
| 23727 chr1 manual_curation CDS 34873739 34873954 . - 0 Parent=GSCOCT00016302001 | |
| 23728 chr1 manual_curation CDS 34872953 34873091 . - 0 Parent=GSCOCT00016302001 | |
| 23729 chr1 manual_curation CDS 34872428 34872480 . - 1 Parent=GSCOCT00016302001 | |
| 23730 chr1 manual_curation CDS 34872206 34872316 . - 0 Parent=GSCOCT00016302001 | |
| 23731 chr1 manual_curation gene 34874106 34877790 . - . ID=GSCOCG00016301001;Name=Cc01_g17610 | |
| 23732 chr1 manual_curation mRNA 34874106 34877790 . - . ID=GSCOCT00016301001;Parent=GSCOCG00016301001;Name=Cc01_g17610 | |
| 23733 chr1 manual_curation polypeptide 34874106 34877790 . - . ID=GSCOCP00016301001;Dbxref=InterPro:IPR011611,PFAM:PF00294,TAIR:AT4G28706.4,TAIR:AT5G43910.2,TrEMBL:A9NTY9,TrEMBL:B9FYL3,TrEMBL:Q6Z1P3;Derives_from=GSCOCT00016301001;Name=Cc01_g17610;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.7.1.3,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016301001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(2373401..2373546%2C2373673..2373739%2C2373817..2373906%2C2374142..2374219%2C2374308..2374382%2C2375437..2375489%2C2376025..2376175%2C2376355..2376469%2C2377039..2377085);owner=coffea | |
| 23734 chr1 manual_curation exon 34877645 34877790 . - . Parent=GSCOCT00016301001 | |
| 23735 chr1 manual_curation exon 34877452 34877518 . - . Parent=GSCOCT00016301001 | |
| 23736 chr1 manual_curation exon 34877285 34877374 . - . Parent=GSCOCT00016301001 | |
| 23737 chr1 manual_curation exon 34876972 34877049 . - . Parent=GSCOCT00016301001 | |
| 23738 chr1 manual_curation exon 34876809 34876883 . - . Parent=GSCOCT00016301001 | |
| 23739 chr1 manual_curation exon 34875702 34875754 . - . Parent=GSCOCT00016301001 | |
| 23740 chr1 manual_curation exon 34875016 34875166 . - . Parent=GSCOCT00016301001 | |
| 23741 chr1 manual_curation exon 34874722 34874836 . - . Parent=GSCOCT00016301001 | |
| 23742 chr1 manual_curation exon 34874106 34874152 . - . Parent=GSCOCT00016301001 | |
| 23743 chr1 manual_curation CDS 34877645 34877790 . - 0 Parent=GSCOCT00016301001 | |
| 23744 chr1 manual_curation CDS 34877452 34877518 . - 2 Parent=GSCOCT00016301001 | |
| 23745 chr1 manual_curation CDS 34877285 34877374 . - 0 Parent=GSCOCT00016301001 | |
| 23746 chr1 manual_curation CDS 34876972 34877049 . - 0 Parent=GSCOCT00016301001 | |
| 23747 chr1 manual_curation CDS 34876809 34876883 . - 0 Parent=GSCOCT00016301001 | |
| 23748 chr1 manual_curation CDS 34875702 34875754 . - 0 Parent=GSCOCT00016301001 | |
| 23749 chr1 manual_curation CDS 34875016 34875166 . - 2 Parent=GSCOCT00016301001 | |
| 23750 chr1 manual_curation CDS 34874722 34874836 . - 0 Parent=GSCOCT00016301001 | |
| 23751 chr1 manual_curation CDS 34874106 34874152 . - 1 Parent=GSCOCT00016301001 | |
| 23752 chr1 manual_curation gene 34878198 34884480 . - . ID=GSCOCG00016300001;Name=Cc01_g17620 | |
| 23753 chr1 manual_curation mRNA 34878198 34884480 . - . ID=GSCOCT00016300001;Parent=GSCOCG00016300001;Name=Cc01_g17620 | |
| 23754 chr1 manual_curation polypeptide 34878463 34884153 . - . ID=GSCOCP00016300001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR020635,PFAM:PF07714,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q8RWW0,SwissProt:Q9FE20,SwissProt:Q9SX31,TAIR:AT2G20300.1,TAIR:AT4G02010.1,TAIR:AT5G56890.1,TrEMBL:B9IBD6,TrEMBL:B9T5V6,TrEMBL:F6HZT2;Derives_from=GSCOCT00016300001;Name=Cc01_g17620;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Receptor-like serine/threonine-protein kinase ALE2,CC_functional_completeness:complete,CC_gene:ALE2,CC_gene:PERK9,CC_gene:PBS1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016300001~ Receptor-like serine/threonine-protein kinase ALE2~ ALE2~ complete;original_location=join(2367038..2367086%2C2368229..2368312%2C2368620..2368733%2C2368809..2368913%2C2369661..2370029%2C2370113..2370379%2C2371116..2371505%2C2371673..2371913%2C2372005..2372728);owner=coffea | |
| 23755 chr1 manual_curation exon 34884105 34884480 . - . Parent=GSCOCT00016300001 | |
| 23756 chr1 manual_curation exon 34882879 34882962 . - . Parent=GSCOCT00016300001 | |
| 23757 chr1 manual_curation exon 34882458 34882571 . - . Parent=GSCOCT00016300001 | |
| 23758 chr1 manual_curation exon 34882278 34882382 . - . Parent=GSCOCT00016300001 | |
| 23759 chr1 manual_curation exon 34881162 34881530 . - . Parent=GSCOCT00016300001 | |
| 23760 chr1 manual_curation exon 34880812 34881078 . - . Parent=GSCOCT00016300001 | |
| 23761 chr1 manual_curation exon 34879686 34880075 . - . Parent=GSCOCT00016300001 | |
| 23762 chr1 manual_curation exon 34879278 34879518 . - . Parent=GSCOCT00016300001 | |
| 23763 chr1 manual_curation exon 34878198 34879186 . - . Parent=GSCOCT00016300001 | |
| 23764 chr1 manual_curation CDS 34884105 34884153 . - 0 Parent=GSCOCT00016300001 | |
| 23765 chr1 manual_curation CDS 34882879 34882962 . - 1 Parent=GSCOCT00016300001 | |
| 23766 chr1 manual_curation CDS 34882458 34882571 . - 1 Parent=GSCOCT00016300001 | |
| 23767 chr1 manual_curation CDS 34882278 34882382 . - 1 Parent=GSCOCT00016300001 | |
| 23768 chr1 manual_curation CDS 34881162 34881530 . - 1 Parent=GSCOCT00016300001 | |
| 23769 chr1 manual_curation CDS 34880812 34881078 . - 1 Parent=GSCOCT00016300001 | |
| 23770 chr1 manual_curation CDS 34879686 34880075 . - 1 Parent=GSCOCT00016300001 | |
| 23771 chr1 manual_curation CDS 34879278 34879518 . - 1 Parent=GSCOCT00016300001 | |
| 23772 chr1 manual_curation CDS 34878463 34879186 . - 2 Parent=GSCOCT00016300001 | |
| 23773 chr1 manual_curation gene 34892687 34898202 . + . ID=GSCOCG00016299001;Name=Cc01_g17630 | |
| 23774 chr1 manual_curation mRNA 34892687 34898202 . + . ID=GSCOCT00016299001;Parent=GSCOCG00016299001;Name=Cc01_g17630 | |
| 23775 chr1 manual_curation polypeptide 34893222 34897861 . + . ID=GSCOCP00016299001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR006595,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019781,InterPro:IPR019782,PFAM:PF00400,PROFILE:PS50082,PROFILE:PS50294,PROFILE:PS50897,SMART:SM00320,SUPERFAMILY:SSF50978,SwissProt:Q28D01,SwissProt:Q5SP67,SwissProt:Q9H7D7,TAIR:AT3G49660.1,TAIR:AT5G08560.1,TAIR:AT5G43920.1,TrEMBL:B9T5V7,TrEMBL:D7MNJ6,TrEMBL:F6HZS9;Derives_from=GSCOCT00016299001;Name=Cc01_g17630;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative WD repeat-containing protein 26,CC_functional_completeness:complete,CC_gene:wdr26,CC_gene:WDR26;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016299001~ Putative WD repeat-containing protein 26~ wdr26~ complete;original_location=complement(join(2357331..2357969%2C2355702..2355803%2C2353615..2354250%2C2353330..2353488));owner=coffea | |
| 23776 chr1 manual_curation exon 34892687 34892948 . + . Parent=GSCOCT00016299001 | |
| 23777 chr1 manual_curation exon 34897703 34898202 . + . Parent=GSCOCT00016299001 | |
| 23778 chr1 manual_curation exon 34896941 34897576 . + . Parent=GSCOCT00016299001 | |
| 23779 chr1 manual_curation exon 34895388 34895489 . + . Parent=GSCOCT00016299001 | |
| 23780 chr1 manual_curation exon 34893105 34893860 . + . Parent=GSCOCT00016299001 | |
| 23781 chr1 manual_curation CDS 34897703 34897861 . + 0 Parent=GSCOCT00016299001 | |
| 23782 chr1 manual_curation CDS 34896941 34897576 . + 0 Parent=GSCOCT00016299001 | |
| 23783 chr1 manual_curation CDS 34895388 34895489 . + 0 Parent=GSCOCT00016299001 | |
| 23784 chr1 manual_curation CDS 34893222 34893860 . + 0 Parent=GSCOCT00016299001 | |
| 23785 chr1 manual_curation gene 34898707 34903572 . + . ID=GSCOCG00016298001;Name=Cc01_g17640 | |
| 23786 chr1 manual_curation mRNA 34898707 34903572 . + . ID=GSCOCT00016298001;Parent=GSCOCG00016298001;Name=Cc01_g17640 | |
| 23787 chr1 manual_curation polypeptide 34898972 34903419 . + . ID=GSCOCP00016298001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019775,InterPro:IPR019781,InterPro:IPR019782,PFAM:PF00400,PROFILE:PS50082,PROFILE:PS50294,PROSITE:PS00678,SMART:SM00320,SUPERFAMILY:SSF50978,SwissProt:A2AH22,SwissProt:Q8YRI1,SwissProt:Q9C0C7,TAIR:AT1G04140.2,TAIR:AT5G43930.4,TrEMBL:B9GRB1,TrEMBL:B9IBD4,TrEMBL:B9T5V8;Derives_from=GSCOCT00016298001;Name=Cc01_g17640;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Transducin family protein / WD-40 repeat family protein,CC_functional_completeness:complete,CC_gene:Ambra1,CC_gene:AMBRA1,CC_gene:alr3466;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016298001~ Transducin family protein / WD-40 repeat family protein~ Ambra1~ complete;original_location=complement(join(2352152..2352219%2C2351755..2351916%2C2351502..2351618%2C2351336..2351420%2C2350942..2351050%2C2350700..2350767%2C2350477..2350602%2C2350218..2350400%2C2349326..2350119%2C2348763..2348966%2C2348613..2348673%2C2348233..2348346%2C2347947..2348060%2C2347772..2347861));owner=coffea | |
| 23788 chr1 manual_curation exon 34903330 34903572 . + . Parent=GSCOCT00016298001 | |
| 23789 chr1 manual_curation exon 34903131 34903244 . + . Parent=GSCOCT00016298001 | |
| 23790 chr1 manual_curation exon 34902845 34902958 . + . Parent=GSCOCT00016298001 | |
| 23791 chr1 manual_curation exon 34902518 34902578 . + . Parent=GSCOCT00016298001 | |
| 23792 chr1 manual_curation exon 34902225 34902428 . + . Parent=GSCOCT00016298001 | |
| 23793 chr1 manual_curation exon 34901072 34901865 . + . Parent=GSCOCT00016298001 | |
| 23794 chr1 manual_curation exon 34900791 34900973 . + . Parent=GSCOCT00016298001 | |
| 23795 chr1 manual_curation exon 34900589 34900714 . + . Parent=GSCOCT00016298001 | |
| 23796 chr1 manual_curation exon 34900424 34900491 . + . Parent=GSCOCT00016298001 | |
| 23797 chr1 manual_curation exon 34900141 34900249 . + . Parent=GSCOCT00016298001 | |
| 23798 chr1 manual_curation exon 34899771 34899855 . + . Parent=GSCOCT00016298001 | |
| 23799 chr1 manual_curation exon 34899573 34899689 . + . Parent=GSCOCT00016298001 | |
| 23800 chr1 manual_curation exon 34899275 34899436 . + . Parent=GSCOCT00016298001 | |
| 23801 chr1 manual_curation exon 34898707 34899039 . + . Parent=GSCOCT00016298001 | |
| 23802 chr1 manual_curation CDS 34903330 34903419 . + 0 Parent=GSCOCT00016298001 | |
| 23803 chr1 manual_curation CDS 34903131 34903244 . + 0 Parent=GSCOCT00016298001 | |
| 23804 chr1 manual_curation CDS 34902845 34902958 . + 0 Parent=GSCOCT00016298001 | |
| 23805 chr1 manual_curation CDS 34902518 34902578 . + 2 Parent=GSCOCT00016298001 | |
| 23806 chr1 manual_curation CDS 34902225 34902428 . + 2 Parent=GSCOCT00016298001 | |
| 23807 chr1 manual_curation CDS 34901072 34901865 . + 0 Parent=GSCOCT00016298001 | |
| 23808 chr1 manual_curation CDS 34900791 34900973 . + 0 Parent=GSCOCT00016298001 | |
| 23809 chr1 manual_curation CDS 34900589 34900714 . + 0 Parent=GSCOCT00016298001 | |
| 23810 chr1 manual_curation CDS 34900424 34900491 . + 1 Parent=GSCOCT00016298001 | |
| 23811 chr1 manual_curation CDS 34900141 34900249 . + 0 Parent=GSCOCT00016298001 | |
| 23812 chr1 manual_curation CDS 34899771 34899855 . + 2 Parent=GSCOCT00016298001 | |
| 23813 chr1 manual_curation CDS 34899573 34899689 . + 2 Parent=GSCOCT00016298001 | |
| 23814 chr1 manual_curation CDS 34899275 34899436 . + 2 Parent=GSCOCT00016298001 | |
| 23815 chr1 manual_curation CDS 34898972 34899039 . + 0 Parent=GSCOCT00016298001 | |
| 23816 chr1 manual_curation gene 34916043 34916646 . - . ID=GSCOCG00016297001;Name=Cc01_g17650 | |
| 23817 chr1 manual_curation mRNA 34916043 34916646 . - . ID=GSCOCT00016297001;Parent=GSCOCG00016297001;Name=Cc01_g17650 | |
| 23818 chr1 manual_curation polypeptide 34916127 34916646 . - . ID=GSCOCP00016297001;Dbxref=GENE3D:G3DSA:2.60.120.10,InterPro:IPR008579,InterPro:IPR011051,InterPro:IPR014710,PFAM:PF05899,SUPERFAMILY:SSF51182,TAIR:AT3G04300.1,TAIR:AT4G10300.1,TAIR:AT4G28703.1,TrEMBL:I1LBS3,TrEMBL:I1LYQ4,TrEMBL:I1NIL6;Derives_from=GSCOCT00016297001;Name=Cc01_g17650;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:RmlC-like cupins superfamily protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016297001~ RmlC-like cupins superfamily protein~ unknown_gene~ modules;original_location=join(2334545..2334651%2C2334827..2335064);owner=coffea | |
| 23819 chr1 manual_curation exon 34916540 34916646 . - . Parent=GSCOCT00016297001 | |
| 23820 chr1 manual_curation exon 34916043 34916364 . - . Parent=GSCOCT00016297001 | |
| 23821 chr1 manual_curation CDS 34916540 34916646 . - 0 Parent=GSCOCT00016297001 | |
| 23822 chr1 manual_curation CDS 34916127 34916364 . - 2 Parent=GSCOCT00016297001 | |
| 23823 chr1 manual_curation gene 34920519 34924595 . + . ID=GSCOCG00016296001;Name=Cc01_g17660 | |
| 23824 chr1 manual_curation mRNA 34920519 34924595 . + . ID=GSCOCT00016296001;Parent=GSCOCG00016296001;Name=Cc01_g17660 | |
| 23825 chr1 manual_curation polypeptide 34920693 34924193 . + . ID=GSCOCP00016296001;Dbxref=InterPro:IPR002085,InterPro:IPR002328,InterPro:IPR011032,InterPro:IPR013149,InterPro:IPR013154,InterPro:IPR014183,PANTHER:PTHR11695,PFAM:PF00107,PFAM:PF08240,PROSITE:PS00059,SUPERFAMILY:SSF50129,SwissProt:A2XAZ3,SwissProt:Q0DWH1,SwissProt:Q96533,TAIR:AT1G77120.1,TAIR:AT5G24760.1,TAIR:AT5G43940.2,TIGRFAMs:TIGR02818,TrEMBL:D2Y3F4,TrEMBL:E9ND18,TrEMBL:E9ND19;Derives_from=GSCOCT00016296001;Name=Cc01_g17660;Ontology_term=CC_evidence_code:ISS,GO:0006069,GO:0008270,GO:0016491,GO:0051903,GO:0055114,CC_EC_number:1.1.1.284,CC_EC_number:1.1.1.284,PRODUCT:Alcohol dehydrogenase class-3,CC_functional_completeness:complete,CC_gene:ADH2,CC_gene:ADHIII,CC_gene:Os02g0815500;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016296001~ Alcohol dehydrogenase class-3~ ADH2~ complete;original_location=complement(join(2330465..2330498%2C2330218..2330354%2C2329941..2329987%2C2329491..2329816%2C2328919..2329001%2C2328764..2328839%2C2327874..2328031%2C2327201..2327362%2C2326998..2327114));owner=coffea | |
| 23826 chr1 manual_curation exon 34924077 34924595 . + . Parent=GSCOCT00016296001 | |
| 23827 chr1 manual_curation exon 34923829 34923990 . + . Parent=GSCOCT00016296001 | |
| 23828 chr1 manual_curation exon 34923160 34923317 . + . Parent=GSCOCT00016296001 | |
| 23829 chr1 manual_curation exon 34922352 34922427 . + . Parent=GSCOCT00016296001 | |
| 23830 chr1 manual_curation exon 34922190 34922272 . + . Parent=GSCOCT00016296001 | |
| 23831 chr1 manual_curation exon 34921375 34921700 . + . Parent=GSCOCT00016296001 | |
| 23832 chr1 manual_curation exon 34921204 34921250 . + . Parent=GSCOCT00016296001 | |
| 23833 chr1 manual_curation exon 34920837 34920973 . + . Parent=GSCOCT00016296001 | |
| 23834 chr1 manual_curation exon 34920519 34920726 . + . Parent=GSCOCT00016296001 | |
| 23835 chr1 manual_curation CDS 34924077 34924193 . + 0 Parent=GSCOCT00016296001 | |
| 23836 chr1 manual_curation CDS 34923829 34923990 . + 0 Parent=GSCOCT00016296001 | |
| 23837 chr1 manual_curation CDS 34923160 34923317 . + 1 Parent=GSCOCT00016296001 | |
| 23838 chr1 manual_curation CDS 34922352 34922427 . + 0 Parent=GSCOCT00016296001 | |
| 23839 chr1 manual_curation CDS 34922190 34922272 . + 1 Parent=GSCOCT00016296001 | |
| 23840 chr1 manual_curation CDS 34921375 34921700 . + 2 Parent=GSCOCT00016296001 | |
| 23841 chr1 manual_curation CDS 34921204 34921250 . + 0 Parent=GSCOCT00016296001 | |
| 23842 chr1 manual_curation CDS 34920837 34920973 . + 1 Parent=GSCOCT00016296001 | |
| 23843 chr1 manual_curation CDS 34920693 34920726 . + 0 Parent=GSCOCT00016296001 | |
| 23844 chr1 manual_curation gene 34924805 34926307 . - . ID=GSCOCG00016295001;Name=Cc01_g17670 | |
| 23845 chr1 manual_curation mRNA 34924805 34926307 . - . ID=GSCOCT00016295001;Parent=GSCOCG00016295001;Name=Cc01_g17670 | |
| 23846 chr1 manual_curation polypeptide 34924805 34926307 . - . ID=GSCOCP00016295001;Dbxref=InterPro:IPR001905,PANTHER:PTHR11730,PFAM:PF00909,SUPERFAMILY:SSF111352,SwissProt:O04161,SwissProt:P54144,SwissProt:P58905,TAIR:AT1G64780.1,TAIR:AT3G24290.1,TAIR:AT4G13510.1,TIGRFAMs:TIGR00836,TrEMBL:B9GRB4,TrEMBL:B9RSH5,TrEMBL:Q9FVI4;Derives_from=GSCOCT00016295001;Name=Cc01_g17670;Ontology_term=CC_evidence_code:ISS,GO:0006810,GO:0008519,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Ammonium transporter 1 member 2,CC_functional_completeness:complete,CC_gene:AMT1-2,CC_gene:AMT1-1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016295001~ Ammonium transporter 1 member 2~ AMT1-2~ complete;original_location=2324884..2326386;owner=coffea | |
| 23847 chr1 manual_curation exon 34924805 34926307 . - . Parent=GSCOCT00016295001 | |
| 23848 chr1 manual_curation CDS 34924805 34926307 . - 0 Parent=GSCOCT00016295001 | |
| 23849 chr1 manual_curation gene 34926969 34930407 . - . ID=GSCOCG00016294001;Name=Cc01_g17680 | |
| 23850 chr1 manual_curation mRNA 34926969 34930407 . - . ID=GSCOCT00016294001;Parent=GSCOCG00016294001;Name=Cc01_g17680 | |
| 23851 chr1 manual_curation polypeptide 34927354 34930226 . - . ID=GSCOCP00016294001;Dbxref=GENE3D:G3DSA:1.25.40.10,InterPro:IPR001440,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR019734,PFAM:PF00515,PROFILE:PS50005,PROFILE:PS50293,SMART:SM00028,SwissProt:O13754,SwissProt:O95801,SwissProt:Q54M20,TAIR:AT1G04130.1,TAIR:AT1G56440.2,TAIR:AT4G11260.1,TrEMBL:B9GRB6,TrEMBL:D7U393,TrEMBL:I1L8H9;Derives_from=GSCOCT00016294001;Name=Cc01_g17680;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:Putative Tetratricopeptide repeat protein 4 homolog,CC_functional_completeness:complete,CC_gene:ttc4,CC_gene:TTC4,CC_gene:cns1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016294001~ Putative Tetratricopeptide repeat protein 4 homolog~ ttc4~ complete;original_location=join(2320965..2321069%2C2321496..2321708%2C2321822..2322013%2C2322100..2322168%2C2322233..2322322%2C2322412..2322501%2C2323148..2323289%2C2323435..2323524%2C2323737..2323837);owner=coffea | |
| 23852 chr1 manual_curation exon 34930122 34930407 . - . Parent=GSCOCT00016294001 | |
| 23853 chr1 manual_curation exon 34929483 34929695 . - . Parent=GSCOCT00016294001 | |
| 23854 chr1 manual_curation exon 34929178 34929369 . - . Parent=GSCOCT00016294001 | |
| 23855 chr1 manual_curation exon 34929023 34929091 . - . Parent=GSCOCT00016294001 | |
| 23856 chr1 manual_curation exon 34928869 34928958 . - . Parent=GSCOCT00016294001 | |
| 23857 chr1 manual_curation exon 34928690 34928779 . - . Parent=GSCOCT00016294001 | |
| 23858 chr1 manual_curation exon 34927902 34928043 . - . Parent=GSCOCT00016294001 | |
| 23859 chr1 manual_curation exon 34927667 34927756 . - . Parent=GSCOCT00016294001 | |
| 23860 chr1 manual_curation exon 34926969 34927454 . - . Parent=GSCOCT00016294001 | |
| 23861 chr1 manual_curation CDS 34930122 34930226 . - 0 Parent=GSCOCT00016294001 | |
| 23862 chr1 manual_curation CDS 34929483 34929695 . - 0 Parent=GSCOCT00016294001 | |
| 23863 chr1 manual_curation CDS 34929178 34929369 . - 0 Parent=GSCOCT00016294001 | |
| 23864 chr1 manual_curation CDS 34929023 34929091 . - 0 Parent=GSCOCT00016294001 | |
| 23865 chr1 manual_curation CDS 34928869 34928958 . - 0 Parent=GSCOCT00016294001 | |
| 23866 chr1 manual_curation CDS 34928690 34928779 . - 0 Parent=GSCOCT00016294001 | |
| 23867 chr1 manual_curation CDS 34927902 34928043 . - 0 Parent=GSCOCT00016294001 | |
| 23868 chr1 manual_curation CDS 34927667 34927756 . - 1 Parent=GSCOCT00016294001 | |
| 23869 chr1 manual_curation CDS 34927354 34927454 . - 1 Parent=GSCOCT00016294001 | |
| 23870 chr1 manual_curation gene 34930797 34935319 . - . ID=GSCOCG00016293001;Name=Cc01_g17690 | |
| 23871 chr1 manual_curation mRNA 34930797 34935319 . - . ID=GSCOCT00016293001;Parent=GSCOCG00016293001;Name=Cc01_g17690 | |
| 23872 chr1 manual_curation polypeptide 34930797 34934838 . - . ID=GSCOCP00016293001;Dbxref=TAIR:AT2G20310.1,TAIR:AT4G27660.1,TAIR:AT4G28690.1,TrEMBL:F6HZS4,TrEMBL:G7KYH7,TrEMBL:I1N9W8;Derives_from=GSCOCT00016293001;Name=Cc01_g17690;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016293001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(2316353..2316703%2C2318530..2318616%2C2318717..2320103%2C2320330..2320394);owner=coffea | |
| 23873 chr1 manual_curation exon 34934488 34935319 . - . Parent=GSCOCT00016293001 | |
| 23874 chr1 manual_curation exon 34932575 34932661 . - . Parent=GSCOCT00016293001 | |
| 23875 chr1 manual_curation exon 34931088 34932474 . - . Parent=GSCOCT00016293001 | |
| 23876 chr1 manual_curation exon 34930797 34930861 . - . Parent=GSCOCT00016293001 | |
| 23877 chr1 manual_curation CDS 34934488 34934838 . - 0 Parent=GSCOCT00016293001 | |
| 23878 chr1 manual_curation CDS 34932575 34932661 . - 0 Parent=GSCOCT00016293001 | |
| 23879 chr1 manual_curation CDS 34931088 34932474 . - 0 Parent=GSCOCT00016293001 | |
| 23880 chr1 manual_curation CDS 34930797 34930861 . - 1 Parent=GSCOCT00016293001 | |
| 23881 chr1 manual_curation gene 34939456 34951481 . + . ID=GSCOCG00016292001;Name=Cc01_g17700 | |
| 23882 chr1 manual_curation mRNA 34939456 34951481 . + . ID=GSCOCT00016292001;Parent=GSCOCG00016292001;Name=Cc01_g17700 | |
| 23883 chr1 manual_curation polypeptide 34940271 34951481 . + . ID=GSCOCP00016292001;Dbxref=InterPro:IPR001194,InterPro:IPR005112,InterPro:IPR005113,PFAM:PF02141,PFAM:PF03456,PROFILE:PS50211,PROFILE:PS50946,PROFILE:PS50947,SMART:SM00799,SwissProt:A2RSQ0,SwissProt:Q5VZ89,SwissProt:Q6NXD8,TAIR:AT2G20320.1,TAIR:AT5G35560.1,TrEMBL:B9SKL1,TrEMBL:F4IUH2,TrEMBL:G7KYI3;Derives_from=GSCOCT00016292001;Name=Cc01_g17700;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:DENN (AEX-3) domain-containing protein,CC_functional_completeness:fragment,CC_gene:dennd5b,CC_gene:DENND4C,CC_gene:Dennd5b;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016292001~ DENN (AEX-3) domain-containing protein~ dennd5b~ fragment;original_location=complement(join(2310570..2310920%2C2309618..2309818%2C2308877..2308960%2C2308254..2308313%2C2308045..2308089%2C2307058..2307257%2C2306457..2306951%2C2306110..2306203%2C2305814..2306008%2C2305644..2305733%2C2304484..2304546%2C2304267..2304341%2C2303582..2303632%2C2302260..2302337%2C2301480..2301614%2C2299894..2300001%2C2299710..2299805));owner=coffea | |
| 23884 chr1 manual_curation exon 34951386 34951481 . + . Parent=GSCOCT00016292001 | |
| 23885 chr1 manual_curation exon 34951190 34951297 . + . Parent=GSCOCT00016292001 | |
| 23886 chr1 manual_curation exon 34949577 34949711 . + . Parent=GSCOCT00016292001 | |
| 23887 chr1 manual_curation exon 34948854 34948931 . + . Parent=GSCOCT00016292001 | |
| 23888 chr1 manual_curation exon 34947559 34947609 . + . Parent=GSCOCT00016292001 | |
| 23889 chr1 manual_curation exon 34946850 34946924 . + . Parent=GSCOCT00016292001 | |
| 23890 chr1 manual_curation exon 34946645 34946707 . + . Parent=GSCOCT00016292001 | |
| 23891 chr1 manual_curation exon 34945458 34945547 . + . Parent=GSCOCT00016292001 | |
| 23892 chr1 manual_curation exon 34945183 34945377 . + . Parent=GSCOCT00016292001 | |
| 23893 chr1 manual_curation exon 34944988 34945081 . + . Parent=GSCOCT00016292001 | |
| 23894 chr1 manual_curation exon 34944240 34944734 . + . Parent=GSCOCT00016292001 | |
| 23895 chr1 manual_curation exon 34943934 34944133 . + . Parent=GSCOCT00016292001 | |
| 23896 chr1 manual_curation exon 34943102 34943146 . + . Parent=GSCOCT00016292001 | |
| 23897 chr1 manual_curation exon 34942878 34942937 . + . Parent=GSCOCT00016292001 | |
| 23898 chr1 manual_curation exon 34942231 34942314 . + . Parent=GSCOCT00016292001 | |
| 23899 chr1 manual_curation exon 34941373 34941573 . + . Parent=GSCOCT00016292001 | |
| 23900 chr1 manual_curation exon 34939456 34940621 . + . Parent=GSCOCT00016292001 | |
| 23901 chr1 manual_curation CDS 34951386 34951481 . + 0 Parent=GSCOCT00016292001 | |
| 23902 chr1 manual_curation CDS 34951190 34951297 . + 0 Parent=GSCOCT00016292001 | |
| 23903 chr1 manual_curation CDS 34949577 34949711 . + 0 Parent=GSCOCT00016292001 | |
| 23904 chr1 manual_curation CDS 34948854 34948931 . + 0 Parent=GSCOCT00016292001 | |
| 23905 chr1 manual_curation CDS 34947559 34947609 . + 0 Parent=GSCOCT00016292001 | |
| 23906 chr1 manual_curation CDS 34946850 34946924 . + 0 Parent=GSCOCT00016292001 | |
| 23907 chr1 manual_curation CDS 34946645 34946707 . + 0 Parent=GSCOCT00016292001 | |
| 23908 chr1 manual_curation CDS 34945458 34945547 . + 0 Parent=GSCOCT00016292001 | |
| 23909 chr1 manual_curation CDS 34945183 34945377 . + 0 Parent=GSCOCT00016292001 | |
| 23910 chr1 manual_curation CDS 34944988 34945081 . + 2 Parent=GSCOCT00016292001 | |
| 23911 chr1 manual_curation CDS 34944240 34944734 . + 2 Parent=GSCOCT00016292001 | |
| 23912 chr1 manual_curation CDS 34943934 34944133 . + 0 Parent=GSCOCT00016292001 | |
| 23913 chr1 manual_curation CDS 34943102 34943146 . + 0 Parent=GSCOCT00016292001 | |
| 23914 chr1 manual_curation CDS 34942878 34942937 . + 0 Parent=GSCOCT00016292001 | |
| 23915 chr1 manual_curation CDS 34942231 34942314 . + 0 Parent=GSCOCT00016292001 | |
| 23916 chr1 manual_curation CDS 34941373 34941573 . + 0 Parent=GSCOCT00016292001 | |
| 23917 chr1 manual_curation CDS 34940271 34940621 . + 0 Parent=GSCOCT00016292001 | |
| 23918 chr1 manual_curation gene 34952415 34957691 . - . ID=GSCOCG00016291001;Name=Cc01_g17710 | |
| 23919 chr1 manual_curation mRNA 34952415 34957691 . - . ID=GSCOCT00016291001;Parent=GSCOCG00016291001;Name=Cc01_g17710 | |
| 23920 chr1 manual_curation polypeptide 34953610 34957547 . - . ID=GSCOCP00016291001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019775,InterPro:IPR019781,InterPro:IPR019782,InterPro:IPR020472,PFAM:PF00400,PRINTS:PR00320,PROFILE:PS50082,PROFILE:PS50294,PROSITE:PS00678,SMART:SM00320,SUPERFAMILY:SSF50978,SwissProt:Q0VA16,SwissProt:Q5EB92,SwissProt:Q6GPP0,TAIR:AT2G20330.1,TAIR:AT2G43770.1,TAIR:AT5G25150.1,TrEMBL:B9IBC9,TrEMBL:B9SKL2,TrEMBL:F6HZR9;Derives_from=GSCOCT00016291001;Name=Cc01_g17710;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative WD repeat-containing protein 70,CC_functional_completeness:complete,CC_gene:wdr70,CC_gene:Wdr70;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016291001~ Putative WD repeat-containing protein 70~ wdr70~ complete;original_location=join(2293644..2294213%2C2294535..2294747%2C2294857..2295057%2C2295930..2296037%2C2296195..2296332%2C2296421..2296672%2C2297017..2297337%2C2297414..2297581);owner=coffea | |
| 23921 chr1 manual_curation exon 34956978 34957691 . - . Parent=GSCOCT00016291001 | |
| 23922 chr1 manual_curation exon 34956444 34956656 . - . Parent=GSCOCT00016291001 | |
| 23923 chr1 manual_curation exon 34956134 34956334 . - . Parent=GSCOCT00016291001 | |
| 23924 chr1 manual_curation exon 34955154 34955261 . - . Parent=GSCOCT00016291001 | |
| 23925 chr1 manual_curation exon 34954859 34954996 . - . Parent=GSCOCT00016291001 | |
| 23926 chr1 manual_curation exon 34954519 34954770 . - . Parent=GSCOCT00016291001 | |
| 23927 chr1 manual_curation exon 34953854 34954174 . - . Parent=GSCOCT00016291001 | |
| 23928 chr1 manual_curation exon 34952415 34953777 . - . Parent=GSCOCT00016291001 | |
| 23929 chr1 manual_curation CDS 34956978 34957547 . - 0 Parent=GSCOCT00016291001 | |
| 23930 chr1 manual_curation CDS 34956444 34956656 . - 0 Parent=GSCOCT00016291001 | |
| 23931 chr1 manual_curation CDS 34956134 34956334 . - 0 Parent=GSCOCT00016291001 | |
| 23932 chr1 manual_curation CDS 34955154 34955261 . - 0 Parent=GSCOCT00016291001 | |
| 23933 chr1 manual_curation CDS 34954859 34954996 . - 0 Parent=GSCOCT00016291001 | |
| 23934 chr1 manual_curation CDS 34954519 34954770 . - 0 Parent=GSCOCT00016291001 | |
| 23935 chr1 manual_curation CDS 34953854 34954174 . - 0 Parent=GSCOCT00016291001 | |
| 23936 chr1 manual_curation CDS 34953610 34953777 . - 0 Parent=GSCOCT00016291001 | |
| 23937 chr1 manual_curation gene 34959182 34967253 . + . ID=GSCOCG00016290001;Name=Cc01_g17720 | |
| 23938 chr1 manual_curation mRNA 34959182 34967253 . + . ID=GSCOCT00016290001;Parent=GSCOCG00016290001;Name=Cc01_g17720 | |
| 23939 chr1 manual_curation polypeptide 34959540 34966966 . + . ID=GSCOCP00016290001;Dbxref=GENE3D:G3DSA:3.40.640.10,GENE3D:G3DSA:3.90.1150.10,InterPro:IPR002129,InterPro:IPR010977,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,InterPro:IPR021115,PANTHER:PTHR11999,PFAM:PF00282,PRINTS:PR00800,PROSITE:PS00392,SUPERFAMILY:SSF53383,SwissProt:Q7XHL3,SwissProt:Q8RY79,SwissProt:Q9M0G4,TAIR:AT2G20340.1,TAIR:AT4G28680.2,TrEMBL:B9GRB9,TrEMBL:C0LIF0,TrEMBL:F6HZR8;Derives_from=GSCOCT00016290001;Name=Cc01_g17720;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0006519,GO:0016831,GO:0019752,GO:0030170,CC_EC_number:4.1.1.28,PRODUCT:Tyrosine decarboxylase 1,CC_functional_completeness:complete,CC_gene:ELI5,CC_gene:Os07g0437500,CC_gene:At4g28680;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016290001~ Tyrosine decarboxylase 1~ ELI5~ complete;original_location=complement(join(2291550..2291651%2C2291080..2291152%2C2290416..2290646%2C2289344..2289507%2C2288921..2289061%2C2288028..2288087%2C2287336..2287500%2C2287089..2287145%2C2286754..2286818%2C2286068..2286191%2C2284510..2284647%2C2284225..2284347));owner=coffea | |
| 23940 chr1 manual_curation exon 34959182 34959429 . + . Parent=GSCOCT00016290001 | |
| 23941 chr1 manual_curation exon 34966844 34967253 . + . Parent=GSCOCT00016290001 | |
| 23942 chr1 manual_curation exon 34966544 34966681 . + . Parent=GSCOCT00016290001 | |
| 23943 chr1 manual_curation exon 34965000 34965123 . + . Parent=GSCOCT00016290001 | |
| 23944 chr1 manual_curation exon 34964373 34964437 . + . Parent=GSCOCT00016290001 | |
| 23945 chr1 manual_curation exon 34964046 34964102 . + . Parent=GSCOCT00016290001 | |
| 23946 chr1 manual_curation exon 34963691 34963855 . + . Parent=GSCOCT00016290001 | |
| 23947 chr1 manual_curation exon 34963104 34963163 . + . Parent=GSCOCT00016290001 | |
| 23948 chr1 manual_curation exon 34962130 34962270 . + . Parent=GSCOCT00016290001 | |
| 23949 chr1 manual_curation exon 34961684 34961847 . + . Parent=GSCOCT00016290001 | |
| 23950 chr1 manual_curation exon 34960545 34960775 . + . Parent=GSCOCT00016290001 | |
| 23951 chr1 manual_curation exon 34960039 34960111 . + . Parent=GSCOCT00016290001 | |
| 23952 chr1 manual_curation exon 34959521 34959641 . + . Parent=GSCOCT00016290001 | |
| 23953 chr1 manual_curation CDS 34966844 34966966 . + 0 Parent=GSCOCT00016290001 | |
| 23954 chr1 manual_curation CDS 34966544 34966681 . + 0 Parent=GSCOCT00016290001 | |
| 23955 chr1 manual_curation CDS 34965000 34965123 . + 2 Parent=GSCOCT00016290001 | |
| 23956 chr1 manual_curation CDS 34964373 34964437 . + 0 Parent=GSCOCT00016290001 | |
| 23957 chr1 manual_curation CDS 34964046 34964102 . + 0 Parent=GSCOCT00016290001 | |
| 23958 chr1 manual_curation CDS 34963691 34963855 . + 0 Parent=GSCOCT00016290001 | |
| 23959 chr1 manual_curation CDS 34963104 34963163 . + 0 Parent=GSCOCT00016290001 | |
| 23960 chr1 manual_curation CDS 34962130 34962270 . + 0 Parent=GSCOCT00016290001 | |
| 23961 chr1 manual_curation CDS 34961684 34961847 . + 1 Parent=GSCOCT00016290001 | |
| 23962 chr1 manual_curation CDS 34960545 34960775 . + 1 Parent=GSCOCT00016290001 | |
| 23963 chr1 manual_curation CDS 34960039 34960111 . + 0 Parent=GSCOCT00016290001 | |
| 23964 chr1 manual_curation CDS 34959540 34959641 . + 0 Parent=GSCOCT00016290001 | |
| 23965 chr1 manual_curation gene 34977769 34987194 . + . ID=GSCOCG00016289001;Name=Cc01_g17730 | |
| 23966 chr1 manual_curation mRNA 34977769 34987194 . + . ID=GSCOCT00016289001;Parent=GSCOCG00016289001;Name=Cc01_g17730 | |
| 23967 chr1 manual_curation polypeptide 34978491 34986731 . + . ID=GSCOCP00016289001;Dbxref=InterPro:IPR001140,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR011527,InterPro:IPR017871,InterPro:IPR017940,PFAM:PF00005,PFAM:PF00664,PROFILE:PS50893,PROFILE:PS50929,PROSITE:PS00211,SMART:SM00382,SUPERFAMILY:SSF90123,SwissProt:Q7GB25,SwissProt:Q9LK64,SwissProt:Q9M1C7,TAIR:AT1G04120.1,TAIR:AT3G13080.1,TAIR:AT3G60160.1,TrEMBL:B9IBC8,TrEMBL:B9SKL4,TrEMBL:F6HZR7;Derives_from=GSCOCT00016289001;Name=Cc01_g17730;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0006810,GO:0016021,GO:0016887,GO:0017111,GO:0055085,CC_EC_number:3.6.3.44,CC_EC_number:3.6.3.44,PRODUCT:ABC transporter C family member 5,CC_functional_completeness:complete,CC_gene:ABCC5,CC_gene:ABCC3,CC_gene:ABCC9;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016289001~ ABC transporter C family member 5~ ABCC5~ complete;original_location=complement(join(2270586..2272700%2C2270149..2270469%2C2269980..2270066%2C2268542..2269237%2C2268253..2268417%2C2266975..2267269%2C2266576..2266790%2C2265743..2266048%2C2265264..2265327%2C2264928..2265167%2C2264460..2264572));owner=coffea | |
| 23968 chr1 manual_curation exon 34978194 34978370 . + . Parent=GSCOCT00016289001 | |
| 23969 chr1 manual_curation exon 34977769 34977910 . + . Parent=GSCOCT00016289001 | |
| 23970 chr1 manual_curation exon 34986619 34987194 . + . Parent=GSCOCT00016289001 | |
| 23971 chr1 manual_curation exon 34986024 34986263 . + . Parent=GSCOCT00016289001 | |
| 23972 chr1 manual_curation exon 34985864 34985927 . + . Parent=GSCOCT00016289001 | |
| 23973 chr1 manual_curation exon 34985143 34985448 . + . Parent=GSCOCT00016289001 | |
| 23974 chr1 manual_curation exon 34984401 34984615 . + . Parent=GSCOCT00016289001 | |
| 23975 chr1 manual_curation exon 34983922 34984216 . + . Parent=GSCOCT00016289001 | |
| 23976 chr1 manual_curation exon 34982774 34982938 . + . Parent=GSCOCT00016289001 | |
| 23977 chr1 manual_curation exon 34981954 34982649 . + . Parent=GSCOCT00016289001 | |
| 23978 chr1 manual_curation exon 34981125 34981211 . + . Parent=GSCOCT00016289001 | |
| 23979 chr1 manual_curation exon 34980722 34981042 . + . Parent=GSCOCT00016289001 | |
| 23980 chr1 manual_curation exon 34978489 34980605 . + . Parent=GSCOCT00016289001 | |
| 23981 chr1 manual_curation CDS 34986619 34986731 . + 1 Parent=GSCOCT00016289001 | |
| 23982 chr1 manual_curation CDS 34986024 34986263 . + 1 Parent=GSCOCT00016289001 | |
| 23983 chr1 manual_curation CDS 34985864 34985927 . + 0 Parent=GSCOCT00016289001 | |
| 23984 chr1 manual_curation CDS 34985143 34985448 . + 0 Parent=GSCOCT00016289001 | |
| 23985 chr1 manual_curation CDS 34984401 34984615 . + 1 Parent=GSCOCT00016289001 | |
| 23986 chr1 manual_curation CDS 34983922 34984216 . + 0 Parent=GSCOCT00016289001 | |
| 23987 chr1 manual_curation CDS 34982774 34982938 . + 0 Parent=GSCOCT00016289001 | |
| 23988 chr1 manual_curation CDS 34981954 34982649 . + 0 Parent=GSCOCT00016289001 | |
| 23989 chr1 manual_curation CDS 34981125 34981211 . + 0 Parent=GSCOCT00016289001 | |
| 23990 chr1 manual_curation CDS 34980722 34981042 . + 0 Parent=GSCOCT00016289001 | |
| 23991 chr1 manual_curation CDS 34978491 34980605 . + 0 Parent=GSCOCT00016289001 | |
| 23992 chr1 manual_curation gene 34989349 34994893 . + . ID=GSCOCG00016288001;Name=Cc01_g17740 | |
| 23993 chr1 manual_curation mRNA 34989349 34994893 . + . ID=GSCOCT00016288001;Parent=GSCOCG00016288001;Name=Cc01_g17740 | |
| 23994 chr1 manual_curation polypeptide 34989473 34994410 . + . ID=GSCOCP00016288001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR001509,InterPro:IPR016040,PFAM:PF01370,SwissProt:P34943,SwissProt:Q5BK63,SwissProt:Q9SK66,TAIR:AT2G20360.1,TrEMBL:A9PE76,TrEMBL:B9GRC3,TrEMBL:D7U382;Derives_from=GSCOCT00016288001;Name=Cc01_g17740;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,GO:0044237,GO:0050662,CC_EC_number:missing_EC_number,PRODUCT:NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9%2C mitochondrial,CC_functional_completeness:complete,CC_gene:At2g20360,CC_gene:Ndufa9,CC_gene:NDUFA9;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016288001~ NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9%2C mitochondrial~ At2g20360~ complete;original_location=complement(join(2261616..2261718%2C2261375..2261471%2C2260973..2261037%2C2260735..2260820%2C2260532..2260616%2C2260379..2260449%2C2258967..2259098%2C2257982..2258097%2C2257768..2257891%2C2257534..2257650%2C2257033..2257153%2C2256781..2256920));owner=coffea | |
| 23995 chr1 manual_curation exon 34994271 34994893 . + . Parent=GSCOCT00016288001 | |
| 23996 chr1 manual_curation exon 34994038 34994158 . + . Parent=GSCOCT00016288001 | |
| 23997 chr1 manual_curation exon 34993541 34993657 . + . Parent=GSCOCT00016288001 | |
| 23998 chr1 manual_curation exon 34993300 34993423 . + . Parent=GSCOCT00016288001 | |
| 23999 chr1 manual_curation exon 34993094 34993209 . + . Parent=GSCOCT00016288001 | |
| 24000 chr1 manual_curation exon 34992093 34992224 . + . Parent=GSCOCT00016288001 | |
| 24001 chr1 manual_curation exon 34990742 34990812 . + . Parent=GSCOCT00016288001 | |
| 24002 chr1 manual_curation exon 34990575 34990659 . + . Parent=GSCOCT00016288001 | |
| 24003 chr1 manual_curation exon 34990371 34990456 . + . Parent=GSCOCT00016288001 | |
| 24004 chr1 manual_curation exon 34990154 34990218 . + . Parent=GSCOCT00016288001 | |
| 24005 chr1 manual_curation exon 34989720 34989816 . + . Parent=GSCOCT00016288001 | |
| 24006 chr1 manual_curation exon 34989349 34989575 . + . Parent=GSCOCT00016288001 | |
| 24007 chr1 manual_curation CDS 34994271 34994410 . + 1 Parent=GSCOCT00016288001 | |
| 24008 chr1 manual_curation CDS 34994038 34994158 . + 0 Parent=GSCOCT00016288001 | |
| 24009 chr1 manual_curation CDS 34993541 34993657 . + 0 Parent=GSCOCT00016288001 | |
| 24010 chr1 manual_curation CDS 34993300 34993423 . + 2 Parent=GSCOCT00016288001 | |
| 24011 chr1 manual_curation CDS 34993094 34993209 . + 0 Parent=GSCOCT00016288001 | |
| 24012 chr1 manual_curation CDS 34992093 34992224 . + 0 Parent=GSCOCT00016288001 | |
| 24013 chr1 manual_curation CDS 34990742 34990812 . + 1 Parent=GSCOCT00016288001 | |
| 24014 chr1 manual_curation CDS 34990575 34990659 . + 0 Parent=GSCOCT00016288001 | |
| 24015 chr1 manual_curation CDS 34990371 34990456 . + 1 Parent=GSCOCT00016288001 | |
| 24016 chr1 manual_curation CDS 34990154 34990218 . + 2 Parent=GSCOCT00016288001 | |
| 24017 chr1 manual_curation CDS 34989720 34989816 . + 1 Parent=GSCOCT00016288001 | |
| 24018 chr1 manual_curation CDS 34989473 34989575 . + 0 Parent=GSCOCT00016288001 | |
| 24019 chr1 manual_curation gene 34995805 34996140 . + . ID=GSCOCG00016287001;Name=Cc01_g17750 | |
| 24020 chr1 manual_curation mRNA 34995805 34996140 . + . ID=GSCOCT00016287001;Parent=GSCOCG00016287001;Name=Cc01_g17750 | |
| 24021 chr1 manual_curation polypeptide 34995805 34996140 . + . ID=GSCOCP00016287001;Dbxref=TrEMBL:F6HZR4,TrEMBL:G7KYF0;Derives_from=GSCOCT00016287001;Name=Cc01_g17750;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016287001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=complement(2255051..2255386);owner=coffea | |
| 24022 chr1 manual_curation exon 34995805 34996140 . + . Parent=GSCOCT00016287001 | |
| 24023 chr1 manual_curation CDS 34995805 34996140 . + 0 Parent=GSCOCT00016287001 | |
| 24024 chr1 manual_curation gene 35002870 35005191 . + . ID=GSCOCG00016284001;Name=Cc01_g17760 | |
| 24025 chr1 manual_curation mRNA 35002870 35005191 . + . ID=GSCOCT00016284001;Parent=GSCOCG00016284001;Name=Cc01_g17760 | |
| 24026 chr1 manual_curation polypeptide 35002870 35005191 . + . ID=GSCOCP00016284001;Dbxref=GENE3D:G3DSA:3.40.50.200,InterPro:IPR000209,InterPro:IPR003137,InterPro:IPR010259,InterPro:IPR015500,InterPro:IPR022398,PANTHER:PTHR10795,PFAM:PF00082,PFAM:PF02225,PFAM:PF05922,PRINTS:PR00723,PROSITE:PS00138,SUPERFAMILY:SSF52743,SwissProt:O64495,SwissProt:O65351,SwissProt:Q9LLL8,TAIR:AT1G04110.1,TAIR:AT2G05920.1,TAIR:AT5G51750.1,TrEMBL:B9SKL8,TrEMBL:F6HZR3,TrEMBL:G7KXH4;Derives_from=GSCOCT00016284001;Name=Cc01_g17760;Ontology_term=CC_evidence_code:ISS,GO:0004252,GO:0006508,GO:0042802,GO:0043086,CC_EC_number:3.4.21.25,PRODUCT:Subtilisin-like protease SDD1,CC_functional_completeness:complete,CC_gene:SDD1,CC_gene:ARA12,CC_gene:XSP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016284001~ Subtilisin-like protease SDD1~ SDD1~ complete;original_location=complement(2246000..2248321);owner=coffea | |
| 24027 chr1 manual_curation exon 35002870 35005191 . + . Parent=GSCOCT00016284001 | |
| 24028 chr1 manual_curation CDS 35002870 35005191 . + 0 Parent=GSCOCT00016284001 | |
| 24029 chr1 manual_curation gene 35005347 35007337 . - . ID=GSCOCG00016283001;Name=Cc01_g17770 | |
| 24030 chr1 manual_curation mRNA 35005347 35007337 . - . ID=GSCOCT00016283001;Parent=GSCOCG00016283001;Name=Cc01_g17770 | |
| 24031 chr1 manual_curation polypeptide 35005892 35007060 . - . ID=GSCOCP00016283001;Dbxref=HAMAP:MF_01370,InterPro:IPR005610,PFAM:PF03912,PRODOM:PD012692,SwissProt:Q00UI6,SwissProt:Q0JG75,SwissProt:Q8W0Y8,TAIR:AT4G28660.2,TIGRFAMs:TIGR03047,TrEMBL:B9SKL9,TrEMBL:C6SZM2,TrEMBL:D7U379;Derives_from=GSCOCT00016283001;Name=Cc01_g17770;Ontology_term=CC_evidence_code:ISS,GO:0009654,GO:0015979,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Photosystem II reaction center PSB28 protein%2C chloroplastic,CC_functional_completeness:complete,CC_gene:PSB28,CC_gene:psb28;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016283001~ Photosystem II reaction center PSB28 protein%2C chloroplastic~ PSB28~ complete;original_location=join(2244131..2244194%2C2244830..2245299);owner=coffea | |
| 24032 chr1 manual_curation exon 35006997 35007337 . - . Parent=GSCOCT00016283001 | |
| 24033 chr1 manual_curation exon 35005347 35006361 . - . Parent=GSCOCT00016283001 | |
| 24034 chr1 manual_curation CDS 35006997 35007060 . - 0 Parent=GSCOCT00016283001 | |
| 24035 chr1 manual_curation CDS 35005892 35006361 . - 1 Parent=GSCOCT00016283001 | |
| 24036 chr1 manual_curation gene 35011461 35014812 . + . ID=GSCOCG00016282001;Name=Cc01_g17780 | |
| 24037 chr1 manual_curation mRNA 35011461 35014812 . + . ID=GSCOCT00016282001;Parent=GSCOCG00016282001;Name=Cc01_g17780 | |
| 24038 chr1 manual_curation polypeptide 35011461 35014812 . + . ID=GSCOCP00016282001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:Q9FII5,SwissProt:Q9FRS6,SwissProt:Q9M0G7,TAIR:AT1G08590.1,TAIR:AT4G28650.1,TAIR:AT5G61480.1,TrEMBL:B9GRD1,TrEMBL:B9TAC6,TrEMBL:I1N9V6;Derives_from=GSCOCT00016282001;Name=Cc01_g17780;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Leucine-rich repeat receptor-like protein kinase PXL2,CC_functional_completeness:complete,CC_gene:PXL2,CC_gene:PXL1,CC_gene:TDR;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016282001~ Leucine-rich repeat receptor-like protein kinase PXL2~ PXL2~ complete;original_location=complement(join(2237075..2239730%2C2236379..2236776));owner=coffea | |
| 24039 chr1 manual_curation exon 35014415 35014812 . + . Parent=GSCOCT00016282001 | |
| 24040 chr1 manual_curation exon 35011461 35014116 . + . Parent=GSCOCT00016282001 | |
| 24041 chr1 manual_curation CDS 35014415 35014812 . + 1 Parent=GSCOCT00016282001 | |
| 24042 chr1 manual_curation CDS 35011461 35014116 . + 0 Parent=GSCOCT00016282001 | |
| 24043 chr1 manual_curation gene 35015072 35022487 . - . ID=GSCOCG00016281001;Name=Cc01_g17790 | |
| 24044 chr1 manual_curation mRNA 35015072 35022487 . - . ID=GSCOCT00016281001;Parent=GSCOCG00016281001;Name=Cc01_g17790 | |
| 24045 chr1 manual_curation polypeptide 35015800 35022316 . - . ID=GSCOCP00016281001;Dbxref=InterPro:IPR003311,InterPro:IPR011525,PFAM:PF02309,PROFILE:PS50962,SwissProt:Q38829,SwissProt:Q38830,SwissProt:Q38831,TAIR:AT1G04550.2,TAIR:AT2G33310.2,TAIR:AT4G28640.2,TrEMBL:D9ZIN0,TrEMBL:F6HZR1,TrEMBL:G9HPW0;Derives_from=GSCOCT00016281001;Name=Cc01_g17790;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0045449,GO:0046983,CC_EC_number:missing_EC_number,PRODUCT:Putative Auxin-responsive protein IAA12,CC_functional_completeness:modules,CC_gene:IAA13,CC_gene:IAA12,CC_gene:IAA11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016281001~ Putative Auxin-responsive protein IAA12~ IAA13~ modules;original_location=join(2228875..2229275%2C2234190..2234518%2C2234887..2235022%2C2235176..2235237%2C2235342..2235391);owner=coffea | |
| 24046 chr1 manual_curation exon 35021916 35022487 . - . Parent=GSCOCT00016281001 | |
| 24047 chr1 manual_curation exon 35016673 35017001 . - . Parent=GSCOCT00016281001 | |
| 24048 chr1 manual_curation exon 35016169 35016304 . - . Parent=GSCOCT00016281001 | |
| 24049 chr1 manual_curation exon 35015954 35016015 . - . Parent=GSCOCT00016281001 | |
| 24050 chr1 manual_curation exon 35015072 35015849 . - . Parent=GSCOCT00016281001 | |
| 24051 chr1 manual_curation CDS 35021916 35022316 . - 0 Parent=GSCOCT00016281001 | |
| 24052 chr1 manual_curation CDS 35016673 35017001 . - 2 Parent=GSCOCT00016281001 | |
| 24053 chr1 manual_curation CDS 35016169 35016304 . - 1 Parent=GSCOCT00016281001 | |
| 24054 chr1 manual_curation CDS 35015954 35016015 . - 2 Parent=GSCOCT00016281001 | |
| 24055 chr1 manual_curation CDS 35015800 35015849 . - 1 Parent=GSCOCT00016281001 | |
| 24056 chr1 manual_curation gene 35030211 35033185 . - . ID=GSCOCG00016280001;Name=Cc01_g17800 | |
| 24057 chr1 manual_curation mRNA 35030211 35033185 . - . ID=GSCOCT00016280001;Parent=GSCOCG00016280001;Name=Cc01_g17800 | |
| 24058 chr1 manual_curation polypeptide 35030211 35032682 . - . ID=GSCOCP00016280001;Dbxref=InterPro:IPR009291,PFAM:PF06101,TAIR:AT1G04090.1,TAIR:AT3G04350.1,TAIR:AT5G43950.1,TrEMBL:A5ADX9,TrEMBL:B9IBC4,TrEMBL:D7U375;Derives_from=GSCOCT00016280001;Name=Cc01_g17800;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Plant protein of unknown function (DUF946),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016280001~ Plant protein of unknown function (DUF946)~ unknown_gene~ complete;original_location=join(2218509..2218617%2C2219052..2220650%2C2220871..2220980);owner=coffea | |
| 24059 chr1 manual_curation exon 35032574 35033185 . - . Parent=GSCOCT00016280001 | |
| 24060 chr1 manual_curation exon 35030541 35032139 . - . Parent=GSCOCT00016280001 | |
| 24061 chr1 manual_curation exon 35030211 35030320 . - . Parent=GSCOCT00016280001 | |
| 24062 chr1 manual_curation CDS 35032574 35032682 . - 0 Parent=GSCOCT00016280001 | |
| 24063 chr1 manual_curation CDS 35030541 35032139 . - 1 Parent=GSCOCT00016280001 | |
| 24064 chr1 manual_curation CDS 35030211 35030320 . - 1 Parent=GSCOCT00016280001 | |
| 24065 chr1 manual_curation gene 35033247 35035904 . + . ID=GSCOCG00016279001;Name=Cc01_g17810 | |
| 24066 chr1 manual_curation mRNA 35033247 35035904 . + . ID=GSCOCT00016279001;Parent=GSCOCG00016279001;Name=Cc01_g17810 | |
| 24067 chr1 manual_curation polypeptide 35034238 35035590 . + . ID=GSCOCP00016279001;Dbxref=GENE3D:G3DSA:1.25.40.10,InterPro:IPR003107,InterPro:IPR011990,InterPro:IPR013026,PROFILE:PS50293,SMART:SM00386,TAIR:AT1G04530.1,TAIR:AT4G17940.1,TAIR:AT5G20190.1,TrEMBL:A5ADY0,TrEMBL:B9SKM5,TrEMBL:I1JP77;Derives_from=GSCOCT00016279001;Name=Cc01_g17810;Ontology_term=CC_evidence_code:ISS,GO:0005488,GO:0005622,GO:0006396,CC_EC_number:missing_EC_number,PRODUCT:Putative Tetratricopeptide repeat (TPR)-like superfamily protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016279001~ Putative Tetratricopeptide repeat (TPR)-like superfamily protein~ unknown_gene~ modules;original_location=complement(join(2216162..2216953%2C2215833..2216005%2C2215601..2215727));owner=coffea | |
| 24068 chr1 manual_curation exon 35033788 35033913 . + . Parent=GSCOCT00016279001 | |
| 24069 chr1 manual_curation exon 35033247 35033619 . + . Parent=GSCOCT00016279001 | |
| 24070 chr1 manual_curation exon 35035464 35035904 . + . Parent=GSCOCT00016279001 | |
| 24071 chr1 manual_curation exon 35035186 35035358 . + . Parent=GSCOCT00016279001 | |
| 24072 chr1 manual_curation exon 35034176 35035029 . + . Parent=GSCOCT00016279001 | |
| 24073 chr1 manual_curation CDS 35035464 35035590 . + 2 Parent=GSCOCT00016279001 | |
| 24074 chr1 manual_curation CDS 35035186 35035358 . + 0 Parent=GSCOCT00016279001 | |
| 24075 chr1 manual_curation CDS 35034238 35035029 . + 0 Parent=GSCOCT00016279001 | |
| 24076 chr1 manual_curation gene 35036174 35042880 . - . ID=GSCOCG00016278001;Name=Cc01_g17820 | |
| 24077 chr1 manual_curation mRNA 35036174 35042880 . - . ID=GSCOCT00016278001;Parent=GSCOCG00016278001;Name=Cc01_g17820 | |
| 24078 chr1 manual_curation polypeptide 35036522 35041976 . - . ID=GSCOCP00016278001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR002075,InterPro:IPR012677,InterPro:IPR018222,PFAM:PF00076,PFAM:PF02136,PROFILE:PS50102,PROFILE:PS50177,SMART:SM00360,SwissProt:O94260,SwissProt:Q13283,SwissProt:Q5RB87,TAIR:AT3G25150.2,TAIR:AT5G43960.1,TAIR:AT5G60980.2,TrEMBL:A5ADY1,TrEMBL:B9SKM6,TrEMBL:F6HZQ7;Derives_from=GSCOCT00016278001;Name=Cc01_g17820;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,GO:0005622,GO:0006810,CC_EC_number:missing_EC_number,PRODUCT:Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain,CC_functional_completeness:complete,CC_gene:nxt3,CC_gene:G3BP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016278001~ Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain~ nxt3~ complete;original_location=join(2209215..2209241%2C2209407..2209541%2C2210375..2210720%2C2211206..2211474%2C2212141..2212300%2C2213068..2213189%2C2213269..2213334%2C2213603..2213684%2C2214560..2214669);owner=coffea | |
| 24079 chr1 manual_curation exon 35041950 35042880 . - . Parent=GSCOCT00016278001 | |
| 24080 chr1 manual_curation exon 35041650 35041784 . - . Parent=GSCOCT00016278001 | |
| 24081 chr1 manual_curation exon 35040471 35040816 . - . Parent=GSCOCT00016278001 | |
| 24082 chr1 manual_curation exon 35039717 35039985 . - . Parent=GSCOCT00016278001 | |
| 24083 chr1 manual_curation exon 35038891 35039050 . - . Parent=GSCOCT00016278001 | |
| 24084 chr1 manual_curation exon 35038002 35038123 . - . Parent=GSCOCT00016278001 | |
| 24085 chr1 manual_curation exon 35037857 35037922 . - . Parent=GSCOCT00016278001 | |
| 24086 chr1 manual_curation exon 35037507 35037588 . - . Parent=GSCOCT00016278001 | |
| 24087 chr1 manual_curation exon 35036174 35036631 . - . Parent=GSCOCT00016278001 | |
| 24088 chr1 manual_curation CDS 35041950 35041976 . - 0 Parent=GSCOCT00016278001 | |
| 24089 chr1 manual_curation CDS 35041650 35041784 . - 0 Parent=GSCOCT00016278001 | |
| 24090 chr1 manual_curation CDS 35040471 35040816 . - 0 Parent=GSCOCT00016278001 | |
| 24091 chr1 manual_curation CDS 35039717 35039985 . - 1 Parent=GSCOCT00016278001 | |
| 24092 chr1 manual_curation CDS 35038891 35039050 . - 0 Parent=GSCOCT00016278001 | |
| 24093 chr1 manual_curation CDS 35038002 35038123 . - 1 Parent=GSCOCT00016278001 | |
| 24094 chr1 manual_curation CDS 35037857 35037922 . - 0 Parent=GSCOCT00016278001 | |
| 24095 chr1 manual_curation CDS 35037507 35037588 . - 0 Parent=GSCOCT00016278001 | |
| 24096 chr1 manual_curation CDS 35036522 35036631 . - 1 Parent=GSCOCT00016278001 | |
| 24097 chr1 manual_curation gene 35043480 35048805 . - . ID=GSCOCG00016277001;Name=Cc01_g17830 | |
| 24098 chr1 manual_curation mRNA 35043480 35048805 . - . ID=GSCOCT00016277001;Parent=GSCOCG00016277001;Name=Cc01_g17830 | |
| 24099 chr1 manual_curation polypeptide 35044062 35048805 . - . ID=GSCOCP00016277001;Dbxref=GENE3D:G3DSA:1.25.40.10,InterPro:IPR003107,InterPro:IPR011990,SMART:SM00386,SwissProt:Q4KLU2,SwissProt:Q86UA1,SwissProt:Q8K2Z2,TAIR:AT1G04080.3,TAIR:AT5G46400.1,TrEMBL:B9GRD6,TrEMBL:B9SKM7,TrEMBL:D7U368;Derives_from=GSCOCT00016277001;Name=Cc01_g17830;Ontology_term=CC_evidence_code:ISS,GO:0005488,GO:0005622,GO:0006396,CC_EC_number:missing_EC_number,PRODUCT:Tetratricopeptide repeat (TPR)-like superfamily protein,CC_functional_completeness:fragment,CC_gene:prpf39,CC_gene:PRPF39,CC_gene:Prpf39;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016277001~ Tetratricopeptide repeat (TPR)-like superfamily protein~ prpf39~ fragment;original_location=join(2202386..2202436%2C2202493..2202600%2C2202710..2202853%2C2203462..2203614%2C2203707..2203823%2C2204302..2204382%2C2204552..2204701%2C2205140..2205433%2C2205580..2205693%2C2207022..2207129);owner=coffea | |
| 24100 chr1 manual_curation exon 35048755 35048805 . - . Parent=GSCOCT00016277001 | |
| 24101 chr1 manual_curation exon 35048591 35048698 . - . Parent=GSCOCT00016277001 | |
| 24102 chr1 manual_curation exon 35048338 35048481 . - . Parent=GSCOCT00016277001 | |
| 24103 chr1 manual_curation exon 35047577 35047729 . - . Parent=GSCOCT00016277001 | |
| 24104 chr1 manual_curation exon 35047368 35047484 . - . Parent=GSCOCT00016277001 | |
| 24105 chr1 manual_curation exon 35046809 35046889 . - . Parent=GSCOCT00016277001 | |
| 24106 chr1 manual_curation exon 35046490 35046639 . - . Parent=GSCOCT00016277001 | |
| 24107 chr1 manual_curation exon 35045758 35046051 . - . Parent=GSCOCT00016277001 | |
| 24108 chr1 manual_curation exon 35045498 35045611 . - . Parent=GSCOCT00016277001 | |
| 24109 chr1 manual_curation exon 35043480 35044169 . - . Parent=GSCOCT00016277001 | |
| 24110 chr1 manual_curation CDS 35048755 35048805 . - 0 Parent=GSCOCT00016277001 | |
| 24111 chr1 manual_curation CDS 35048591 35048698 . - 0 Parent=GSCOCT00016277001 | |
| 24112 chr1 manual_curation CDS 35048338 35048481 . - 0 Parent=GSCOCT00016277001 | |
| 24113 chr1 manual_curation CDS 35047577 35047729 . - 0 Parent=GSCOCT00016277001 | |
| 24114 chr1 manual_curation CDS 35047368 35047484 . - 0 Parent=GSCOCT00016277001 | |
| 24115 chr1 manual_curation CDS 35046809 35046889 . - 0 Parent=GSCOCT00016277001 | |
| 24116 chr1 manual_curation CDS 35046490 35046639 . - 0 Parent=GSCOCT00016277001 | |
| 24117 chr1 manual_curation CDS 35045758 35046051 . - 0 Parent=GSCOCT00016277001 | |
| 24118 chr1 manual_curation CDS 35045498 35045611 . - 0 Parent=GSCOCT00016277001 | |
| 24119 chr1 manual_curation CDS 35044062 35044169 . - 0 Parent=GSCOCT00016277001 | |
| 24120 chr1 manual_curation gene 35048856 35054656 . - . ID=GSCOCG00016276001;Name=Cc01_g17840 | |
| 24121 chr1 manual_curation mRNA 35048856 35054656 . - . ID=GSCOCT00016276001;Parent=GSCOCG00016276001;Name=Cc01_g17840 | |
| 24122 chr1 manual_curation polypeptide 35048856 35052884 . - . ID=GSCOCP00016276001;Dbxref=InterPro:IPR003107,InterPro:IPR008847,PFAM:PF05843,SMART:SM00386,SwissProt:Q1JPZ7,SwissProt:Q86UA1,SwissProt:Q8K2Z2,TAIR:AT1G04080.3,TAIR:AT5G46400.1,TrEMBL:A5B280,TrEMBL:F6HZQ6,TrEMBL:G7KXF7;Derives_from=GSCOCT00016276001;Name=Cc01_g17840;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0005634,GO:0006396,GO:0006397,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:PRPF39,CC_gene:prpf39,CC_gene:Prpf39;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016276001~ Putative uncharacterized protein~ PRPF39~ complete;original_location=join(2198307..2198766%2C2199288..2199391%2C2199896..2200125%2C2200721..2200888%2C2201847..2202210%2C2202297..2202335);owner=coffea | |
| 24123 chr1 manual_curation exon 35054488 35054656 . - . Parent=GSCOCT00016276001 | |
| 24124 chr1 manual_curation exon 35052425 35052918 . - . Parent=GSCOCT00016276001 | |
| 24125 chr1 manual_curation exon 35051800 35051903 . - . Parent=GSCOCT00016276001 | |
| 24126 chr1 manual_curation exon 35051066 35051295 . - . Parent=GSCOCT00016276001 | |
| 24127 chr1 manual_curation exon 35050303 35050470 . - . Parent=GSCOCT00016276001 | |
| 24128 chr1 manual_curation exon 35048981 35049344 . - . Parent=GSCOCT00016276001 | |
| 24129 chr1 manual_curation exon 35048856 35048894 . - . Parent=GSCOCT00016276001 | |
| 24130 chr1 manual_curation CDS 35052425 35052884 . - 0 Parent=GSCOCT00016276001 | |
| 24131 chr1 manual_curation CDS 35051800 35051903 . - 1 Parent=GSCOCT00016276001 | |
| 24132 chr1 manual_curation CDS 35051066 35051295 . - 0 Parent=GSCOCT00016276001 | |
| 24133 chr1 manual_curation CDS 35050303 35050470 . - 2 Parent=GSCOCT00016276001 | |
| 24134 chr1 manual_curation CDS 35048981 35049344 . - 2 Parent=GSCOCT00016276001 | |
| 24135 chr1 manual_curation CDS 35048856 35048894 . - 0 Parent=GSCOCT00016276001 | |
| 24136 chr1 manual_curation gene 35060040 35062285 . - . ID=GSCOCG00016274001;Name=Cc01_g17850 | |
| 24137 chr1 manual_curation mRNA 35060040 35062285 . - . ID=GSCOCT00016274001;Parent=GSCOCG00016274001;Name=Cc01_g17850 | |
| 24138 chr1 manual_curation polypeptide 35060762 35061918 . - . ID=GSCOCP00016274001;Dbxref=InterPro:IPR002902,PFAM:PF01657,SwissProt:O22784,SwissProt:Q6NM73,SwissProt:Q8GXV7,TAIR:AT1G04520.1,TAIR:AT2G33330.1,TAIR:AT5G43980.1,TrEMBL:A5BV43,TrEMBL:B9GRD8,TrEMBL:D7U362;Derives_from=GSCOCT00016274001;Name=Cc01_g17850;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Cysteine-rich repeat secretory protein 3,CC_functional_completeness:complete,CC_gene:CRRSP3,CC_gene:CRRSP11,CC_gene:CRRSP56;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016274001~ Cysteine-rich repeat secretory protein 3~ CRRSP3~ complete;original_location=join(2189273..2190011%2C2190293..2190429);owner=coffea | |
| 24139 chr1 manual_curation exon 35061180 35062285 . - . Parent=GSCOCT00016274001 | |
| 24140 chr1 manual_curation exon 35060040 35060898 . - . Parent=GSCOCT00016274001 | |
| 24141 chr1 manual_curation CDS 35061180 35061918 . - 0 Parent=GSCOCT00016274001 | |
| 24142 chr1 manual_curation CDS 35060762 35060898 . - 1 Parent=GSCOCT00016274001 | |
| 24143 chr1 manual_curation gene 35065116 35069203 . + . ID=GSCOCG00016273001;Name=Cc01_g17860 | |
| 24144 chr1 manual_curation mRNA 35065116 35069203 . + . ID=GSCOCT00016273001;Parent=GSCOCG00016273001;Name=Cc01_g17860 | |
| 24145 chr1 manual_curation polypeptide 35066648 35068884 . + . ID=GSCOCP00016273001;Dbxref=InterPro:IPR018848,PFAM:PF10440,SwissProt:Q946J2,SwissProt:Q9FNC7,TAIR:AT1G04050.1,TAIR:AT5G43990.2,TrEMBL:B9SKN2,TrEMBL:F6HZQ2,TrEMBL:I1NIT1;Derives_from=GSCOCT00016273001;Name=Cc01_g17860;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:SUVR2,CC_gene:SUVR1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016273001~ Putative uncharacterized protein~ SUVR2~ fragment;original_location=complement(join(2184361..2184543%2C2184175..2184210%2C2183471..2184056%2C2182307..2182698));owner=coffea | |
| 24146 chr1 manual_curation exon 35065116 35065354 . + . Parent=GSCOCT00016273001 | |
| 24147 chr1 manual_curation exon 35068493 35069203 . + . Parent=GSCOCT00016273001 | |
| 24148 chr1 manual_curation exon 35067135 35067720 . + . Parent=GSCOCT00016273001 | |
| 24149 chr1 manual_curation exon 35066981 35067016 . + . Parent=GSCOCT00016273001 | |
| 24150 chr1 manual_curation exon 35066598 35066830 . + . Parent=GSCOCT00016273001 | |
| 24151 chr1 manual_curation CDS 35068493 35068884 . + 1 Parent=GSCOCT00016273001 | |
| 24152 chr1 manual_curation CDS 35067135 35067720 . + 0 Parent=GSCOCT00016273001 | |
| 24153 chr1 manual_curation CDS 35066981 35067016 . + 0 Parent=GSCOCT00016273001 | |
| 24154 chr1 manual_curation CDS 35066648 35066830 . + 0 Parent=GSCOCT00016273001 | |
| 24155 chr1 manual_curation gene 35071021 35079534 . + . ID=GSCOCG00016271001;Name=Cc01_g17870 | |
| 24156 chr1 manual_curation mRNA 35071021 35079534 . + . ID=GSCOCT00016271001;Parent=GSCOCG00016271001;Name=Cc01_g17870 | |
| 24157 chr1 manual_curation polypeptide 35074478 35079184 . + . ID=GSCOCP00016271001;Dbxref=InterPro:IPR001214,InterPro:IPR003606,InterPro:IPR007728,InterPro:IPR018848,PFAM:PF00856,PFAM:PF05033,PFAM:PF10440,PROFILE:PS50280,PROFILE:PS50867,SMART:SM00317,SMART:SM00468,SwissProt:Q8W595,SwissProt:Q946J2,SwissProt:Q9FNC7,TAIR:AT1G04050.1,TAIR:AT3G04380.1,TAIR:AT5G43990.2,TrEMBL:B9IBB4,TrEMBL:B9SKN2,TrEMBL:F6HZQ2;Derives_from=GSCOCT00016271001;Name=Cc01_g17870;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0008270,GO:0016568,GO:0018024,CC_EC_number:2.1.1.43,PRODUCT:Putative Histone-lysine N-methyltransferase SUVR2,CC_functional_completeness:complete,CC_gene:SUVR2,CC_gene:SUVR4,CC_gene:SUVR1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016271001~ Putative Histone-lysine N-methyltransferase SUVR2~ SUVR2~ complete;original_location=complement(join(2176531..2176713%2C2176350..2176391%2C2175970..2176228%2C2175619..2175834%2C2173851..2175085%2C2173444..2173706%2C2173070..2173136%2C2172936..2172986%2C2172594..2172690%2C2172007..2172032));owner=coffea | |
| 24158 chr1 manual_curation exon 35071772 35071831 . + . Parent=GSCOCT00016271001 | |
| 24159 chr1 manual_curation exon 35071021 35071067 . + . Parent=GSCOCT00016271001 | |
| 24160 chr1 manual_curation exon 35079159 35079534 . + . Parent=GSCOCT00016271001 | |
| 24161 chr1 manual_curation exon 35078501 35078597 . + . Parent=GSCOCT00016271001 | |
| 24162 chr1 manual_curation exon 35078205 35078255 . + . Parent=GSCOCT00016271001 | |
| 24163 chr1 manual_curation exon 35078055 35078121 . + . Parent=GSCOCT00016271001 | |
| 24164 chr1 manual_curation exon 35077485 35077747 . + . Parent=GSCOCT00016271001 | |
| 24165 chr1 manual_curation exon 35076106 35077340 . + . Parent=GSCOCT00016271001 | |
| 24166 chr1 manual_curation exon 35075357 35075572 . + . Parent=GSCOCT00016271001 | |
| 24167 chr1 manual_curation exon 35074963 35075221 . + . Parent=GSCOCT00016271001 | |
| 24168 chr1 manual_curation exon 35074800 35074841 . + . Parent=GSCOCT00016271001 | |
| 24169 chr1 manual_curation exon 35074429 35074660 . + . Parent=GSCOCT00016271001 | |
| 24170 chr1 manual_curation CDS 35079159 35079184 . + 1 Parent=GSCOCT00016271001 | |
| 24171 chr1 manual_curation CDS 35078501 35078597 . + 0 Parent=GSCOCT00016271001 | |
| 24172 chr1 manual_curation CDS 35078205 35078255 . + 0 Parent=GSCOCT00016271001 | |
| 24173 chr1 manual_curation CDS 35078055 35078121 . + 2 Parent=GSCOCT00016271001 | |
| 24174 chr1 manual_curation CDS 35077485 35077747 . + 0 Parent=GSCOCT00016271001 | |
| 24175 chr1 manual_curation CDS 35076106 35077340 . + 1 Parent=GSCOCT00016271001 | |
| 24176 chr1 manual_curation CDS 35075357 35075572 . + 1 Parent=GSCOCT00016271001 | |
| 24177 chr1 manual_curation CDS 35074963 35075221 . + 0 Parent=GSCOCT00016271001 | |
| 24178 chr1 manual_curation CDS 35074800 35074841 . + 0 Parent=GSCOCT00016271001 | |
| 24179 chr1 manual_curation CDS 35074478 35074660 . + 0 Parent=GSCOCT00016271001 | |
| 24180 chr1 manual_curation gene 35079976 35082192 . - . ID=GSCOCG00016270001;Name=Cc01_g17880 | |
| 24181 chr1 manual_curation mRNA 35079976 35082192 . - . ID=GSCOCT00016270001;Parent=GSCOCG00016270001;Name=Cc01_g17880 | |
| 24182 chr1 manual_curation polypeptide 35080224 35081961 . - . ID=GSCOCP00016270001;Dbxref=GENE3D:G3DSA:1.20.1050.10,InterPro:IPR004046,InterPro:IPR010987,InterPro:IPR012336,InterPro:IPR016639,InterPro:IPR017933,PFAM:PF00043,PIR:PIRSF015753,PROFILE:PS50405,SUPERFAMILY:SSF47616,SUPERFAMILY:SSF52833,SwissProt:O94524,SwissProt:P36156,SwissProt:P42620,TAIR:AT4G19880.2,TAIR:AT5G44000.1,TAIR:AT5G45020.1,TrEMBL:B9IBB3,TrEMBL:F6HZQ1,TrEMBL:I1L8H1;Derives_from=GSCOCT00016270001;Name=Cc01_g17880;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized protein yqjG,CC_functional_completeness:complete,CC_gene:yqjG,CC_gene:gto2,CC_gene:ECM4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016270001~ Putative Uncharacterized protein yqjG~ yqjG~ complete;original_location=join(2169230..2169918%2C2170001..2170250%2C2170779..2170967);owner=coffea | |
| 24183 chr1 manual_curation exon 35081273 35082192 . - . Parent=GSCOCT00016270001 | |
| 24184 chr1 manual_curation exon 35080941 35081190 . - . Parent=GSCOCT00016270001 | |
| 24185 chr1 manual_curation exon 35079976 35080412 . - . Parent=GSCOCT00016270001 | |
| 24186 chr1 manual_curation CDS 35081273 35081961 . - 0 Parent=GSCOCT00016270001 | |
| 24187 chr1 manual_curation CDS 35080941 35081190 . - 2 Parent=GSCOCT00016270001 | |
| 24188 chr1 manual_curation CDS 35080224 35080412 . - 0 Parent=GSCOCT00016270001 | |
| 24189 chr1 manual_curation gene 35083407 35085221 . + . ID=GSCOCG00016269001;Name=Cc01_g17890 | |
| 24190 chr1 manual_curation mRNA 35083407 35085221 . + . ID=GSCOCT00016269001;Parent=GSCOCG00016269001;Name=Cc01_g17890 | |
| 24191 chr1 manual_curation polypeptide 35083576 35084907 . + . ID=GSCOCP00016269001;Dbxref=GENE3D:G3DSA:2.40.150.20,InterPro:IPR000218,InterPro:IPR019972,PANTHER:PTHR11761,PFAM:PF00238,PROSITE:PS00049,SUPERFAMILY:SSF50193,SwissProt:P49690,SwissProt:Q07760,SwissProt:Q9XEK8,TAIR:AT1G04480.1,TAIR:AT2G33370.1,TAIR:AT3G04400.1,TrEMBL:D6CH07,TrEMBL:I1R8G3,TrEMBL:Q9AV77;Derives_from=GSCOCT00016269001;Name=Cc01_g17890;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:60S ribosomal protein L23,CC_functional_completeness:complete,CC_gene:RPL23A,CC_gene:RPL23;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016269001~ 60S ribosomal protein L23~ RPL23A~ complete;original_location=complement(join(2167603..2167615%2C2167238..2167522%2C2166627..2166668%2C2166284..2166366));owner=coffea | |
| 24192 chr1 manual_curation exon 35084825 35085221 . + . Parent=GSCOCT00016269001 | |
| 24193 chr1 manual_curation exon 35084523 35084564 . + . Parent=GSCOCT00016269001 | |
| 24194 chr1 manual_curation exon 35083669 35083953 . + . Parent=GSCOCT00016269001 | |
| 24195 chr1 manual_curation exon 35083407 35083588 . + . Parent=GSCOCT00016269001 | |
| 24196 chr1 manual_curation CDS 35084825 35084907 . + 1 Parent=GSCOCT00016269001 | |
| 24197 chr1 manual_curation CDS 35084523 35084564 . + 1 Parent=GSCOCT00016269001 | |
| 24198 chr1 manual_curation CDS 35083669 35083953 . + 1 Parent=GSCOCT00016269001 | |
| 24199 chr1 manual_curation CDS 35083576 35083588 . + 0 Parent=GSCOCT00016269001 | |
| 24200 chr1 manual_curation gene 35086211 35090210 . + . ID=GSCOCG00016268001;Name=Cc01_g17900 | |
| 24201 chr1 manual_curation mRNA 35086211 35090210 . + . ID=GSCOCT00016268001;Parent=GSCOCG00016268001;Name=Cc01_g17900 | |
| 24202 chr1 manual_curation polypeptide 35086211 35090210 . + . ID=GSCOCP00016268001;Dbxref=TAIR:AT5G44010.1,TrEMBL:B9IBB2,TrEMBL:B9SKN7,TrEMBL:Q0DWI0;Derives_from=GSCOCT00016268001;Name=Cc01_g17900;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B Has 28 Blast hits to 26 proteins in 11 species,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016268001~ Putative unknown protein%3B Has 28 Blast hits to 26 proteins in 11 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 28%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(2164813..2164980%2C2164518..2164616%2C2164203..2164437%2C2164001..2164139%2C2163476..2163617%2C2162730..2162897%2C2161893..2161993%2C2161588..2161656%2C2161450..2161490%2C2160981..2161039));owner=coffea | |
| 24203 chr1 manual_curation exon 35090152 35090210 . + . Parent=GSCOCT00016268001 | |
| 24204 chr1 manual_curation exon 35089701 35089741 . + . Parent=GSCOCT00016268001 | |
| 24205 chr1 manual_curation exon 35089535 35089603 . + . Parent=GSCOCT00016268001 | |
| 24206 chr1 manual_curation exon 35089198 35089298 . + . Parent=GSCOCT00016268001 | |
| 24207 chr1 manual_curation exon 35088294 35088461 . + . Parent=GSCOCT00016268001 | |
| 24208 chr1 manual_curation exon 35087574 35087715 . + . Parent=GSCOCT00016268001 | |
| 24209 chr1 manual_curation exon 35087052 35087190 . + . Parent=GSCOCT00016268001 | |
| 24210 chr1 manual_curation exon 35086754 35086988 . + . Parent=GSCOCT00016268001 | |
| 24211 chr1 manual_curation exon 35086575 35086673 . + . Parent=GSCOCT00016268001 | |
| 24212 chr1 manual_curation exon 35086211 35086378 . + . Parent=GSCOCT00016268001 | |
| 24213 chr1 manual_curation CDS 35090152 35090210 . + 1 Parent=GSCOCT00016268001 | |
| 24214 chr1 manual_curation CDS 35089701 35089741 . + 2 Parent=GSCOCT00016268001 | |
| 24215 chr1 manual_curation CDS 35089535 35089603 . + 2 Parent=GSCOCT00016268001 | |
| 24216 chr1 manual_curation CDS 35089198 35089298 . + 0 Parent=GSCOCT00016268001 | |
| 24217 chr1 manual_curation CDS 35088294 35088461 . + 0 Parent=GSCOCT00016268001 | |
| 24218 chr1 manual_curation CDS 35087574 35087715 . + 2 Parent=GSCOCT00016268001 | |
| 24219 chr1 manual_curation CDS 35087052 35087190 . + 1 Parent=GSCOCT00016268001 | |
| 24220 chr1 manual_curation CDS 35086754 35086988 . + 0 Parent=GSCOCT00016268001 | |
| 24221 chr1 manual_curation CDS 35086575 35086673 . + 0 Parent=GSCOCT00016268001 | |
| 24222 chr1 manual_curation CDS 35086211 35086378 . + 0 Parent=GSCOCT00016268001 | |
| 24223 chr1 manual_curation gene 35092998 35094609 . + . ID=GSCOCG00016265001;Name=Cc01_g17910 | |
| 24224 chr1 manual_curation mRNA 35092998 35094609 . + . ID=GSCOCT00016265001;Parent=GSCOCG00016265001;Name=Cc01_g17910 | |
| 24225 chr1 manual_curation polypeptide 35093234 35094344 . + . ID=GSCOCP00016265001;Dbxref=InterPro:IPR005519,InterPro:IPR010028,InterPro:IPR014403,PFAM:PF03767,PIR:PIRSF002674,SwissProt:P10742,SwissProt:P15490,SwissProt:P27061,TAIR:AT1G04040.1,TAIR:AT2G38600.1,TAIR:AT5G44020.1,TIGRFAMs:TIGR01675,TrEMBL:A9PBL1,TrEMBL:B9SKN9,TrEMBL:D7U356;Derives_from=GSCOCT00016265001;Name=Cc01_g17910;Ontology_term=CC_evidence_code:ISS,GO:0003993,CC_EC_number:missing_EC_number,PRODUCT:Putative Acid phosphatase 1,CC_functional_completeness:complete,CC_gene:APS1,CC_gene:VSPA,CC_gene:VSP25;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016265001~ Putative Acid phosphatase 1~ APS1~ complete;original_location=complement(join(2157566..2157957%2C2157157..2157366%2C2156847..2157027));owner=coffea | |
| 24226 chr1 manual_curation exon 35094164 35094609 . + . Parent=GSCOCT00016265001 | |
| 24227 chr1 manual_curation exon 35093825 35094034 . + . Parent=GSCOCT00016265001 | |
| 24228 chr1 manual_curation exon 35092998 35093625 . + . Parent=GSCOCT00016265001 | |
| 24229 chr1 manual_curation CDS 35094164 35094344 . + 2 Parent=GSCOCT00016265001 | |
| 24230 chr1 manual_curation CDS 35093825 35094034 . + 2 Parent=GSCOCT00016265001 | |
| 24231 chr1 manual_curation CDS 35093234 35093625 . + 0 Parent=GSCOCT00016265001 | |
| 24232 chr1 manual_curation gene 35096197 35102166 . + . ID=GSCOCG00016264001;Name=Cc01_g17920 | |
| 24233 chr1 manual_curation mRNA 35096197 35102166 . + . ID=GSCOCT00016264001;Parent=GSCOCG00016264001;Name=Cc01_g17920 | |
| 24234 chr1 manual_curation polypeptide 35097785 35101634 . + . ID=GSCOCP00016264001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR006447,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR014778,InterPro:IPR017930,PFAM:PF00249,PROFILE:PS51294,SUPERFAMILY:SSF46689,SwissProt:Q700D9,SwissProt:Q9FJV5,SwissProt:Q9SAK5,TAIR:AT3G04450.1,TAIR:AT4G28610.1,TAIR:AT5G29000.2,TIGRFAMs:TIGR01557,TrEMBL:B9SKP0,TrEMBL:F6HZP9,TrEMBL:G7KXD8;Derives_from=GSCOCT00016264001;Name=Cc01_g17920;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative phosphate starvation response 1,CC_functional_completeness:complete,CC_gene:APL,CC_gene:At1g14600,CC_gene:KAN4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016264001~ Putative phosphate starvation response 1~ APL~ complete;original_location=complement(join(2152765..2153406%2C2152385..2152583%2C2152218..2152294%2C2152086..2152125%2C2151394..2151451%2C2150223..2150292%2C2149557..2149877));owner=coffea | |
| 24235 chr1 manual_curation exon 35096667 35096750 . + . Parent=GSCOCT00016264001 | |
| 24236 chr1 manual_curation exon 35096197 35096505 . + . Parent=GSCOCT00016264001 | |
| 24237 chr1 manual_curation exon 35101314 35102166 . + . Parent=GSCOCT00016264001 | |
| 24238 chr1 manual_curation exon 35100899 35100968 . + . Parent=GSCOCT00016264001 | |
| 24239 chr1 manual_curation exon 35099740 35099797 . + . Parent=GSCOCT00016264001 | |
| 24240 chr1 manual_curation exon 35099066 35099105 . + . Parent=GSCOCT00016264001 | |
| 24241 chr1 manual_curation exon 35098897 35098973 . + . Parent=GSCOCT00016264001 | |
| 24242 chr1 manual_curation exon 35098608 35098806 . + . Parent=GSCOCT00016264001 | |
| 24243 chr1 manual_curation exon 35097702 35098426 . + . Parent=GSCOCT00016264001 | |
| 24244 chr1 manual_curation CDS 35101314 35101634 . + 0 Parent=GSCOCT00016264001 | |
| 24245 chr1 manual_curation CDS 35100899 35100968 . + 2 Parent=GSCOCT00016264001 | |
| 24246 chr1 manual_curation CDS 35099740 35099797 . + 1 Parent=GSCOCT00016264001 | |
| 24247 chr1 manual_curation CDS 35099066 35099105 . + 0 Parent=GSCOCT00016264001 | |
| 24248 chr1 manual_curation CDS 35098897 35098973 . + 1 Parent=GSCOCT00016264001 | |
| 24249 chr1 manual_curation CDS 35098608 35098806 . + 0 Parent=GSCOCT00016264001 | |
| 24250 chr1 manual_curation CDS 35097785 35098426 . + 0 Parent=GSCOCT00016264001 | |
| 24251 chr1 manual_curation gene 35104235 35111356 . + . ID=GSCOCG00016263001;Name=Cc01_g17930 | |
| 24252 chr1 manual_curation mRNA 35104235 35111356 . + . ID=GSCOCT00016263001;Parent=GSCOCG00016263001;Name=Cc01_g17930 | |
| 24253 chr1 manual_curation polypeptide 35104416 35110902 . + . ID=GSCOCP00016263001;Dbxref=InterPro:IPR005150,PFAM:PF03552,SwissProt:Q69V23,SwissProt:Q84JA6,SwissProt:Q9AV71,TAIR:AT5G05170.1,TAIR:AT5G17420.1,TAIR:AT5G44030.1,TrEMBL:B8XPP6,TrEMBL:F6HZP8,TrEMBL:G7INF0;Derives_from=GSCOCT00016263001;Name=Cc01_g17930;Ontology_term=CC_evidence_code:ISS,GO:0016020,GO:0016760,GO:0030244,CC_EC_number:2.4.1.12,PRODUCT:Cellulose synthase A catalytic subunit 4 [UDP-forming],CC_functional_completeness:complete,CC_gene:CESA4,CC_gene:CESA7,CC_gene:CESA3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016263001~ Cellulose synthase A catalytic subunit 4 [UDP-forming]~ CESA4~ complete;original_location=complement(join(2146701..2146775%2C2146366..2146567%2C2146150..2146262%2C2145862..2145931%2C2145499..2145664%2C2144781..2145393%2C2144549..2144686%2C2144308..2144433%2C2143795..2144007%2C2141652..2142176%2C2140971..2141321%2C2140289..2140870));owner=coffea | |
| 24254 chr1 manual_curation exon 35110321 35111356 . + . Parent=GSCOCT00016263001 | |
| 24255 chr1 manual_curation exon 35109870 35110220 . + . Parent=GSCOCT00016263001 | |
| 24256 chr1 manual_curation exon 35109015 35109539 . + . Parent=GSCOCT00016263001 | |
| 24257 chr1 manual_curation exon 35107184 35107396 . + . Parent=GSCOCT00016263001 | |
| 24258 chr1 manual_curation exon 35106758 35106883 . + . Parent=GSCOCT00016263001 | |
| 24259 chr1 manual_curation exon 35106505 35106642 . + . Parent=GSCOCT00016263001 | |
| 24260 chr1 manual_curation exon 35105798 35106410 . + . Parent=GSCOCT00016263001 | |
| 24261 chr1 manual_curation exon 35105527 35105692 . + . Parent=GSCOCT00016263001 | |
| 24262 chr1 manual_curation exon 35105260 35105329 . + . Parent=GSCOCT00016263001 | |
| 24263 chr1 manual_curation exon 35104929 35105041 . + . Parent=GSCOCT00016263001 | |
| 24264 chr1 manual_curation exon 35104624 35104825 . + . Parent=GSCOCT00016263001 | |
| 24265 chr1 manual_curation exon 35104235 35104490 . + . Parent=GSCOCT00016263001 | |
| 24266 chr1 manual_curation CDS 35110321 35110902 . + 0 Parent=GSCOCT00016263001 | |
| 24267 chr1 manual_curation CDS 35109870 35110220 . + 0 Parent=GSCOCT00016263001 | |
| 24268 chr1 manual_curation CDS 35109015 35109539 . + 0 Parent=GSCOCT00016263001 | |
| 24269 chr1 manual_curation CDS 35107184 35107396 . + 0 Parent=GSCOCT00016263001 | |
| 24270 chr1 manual_curation CDS 35106758 35106883 . + 0 Parent=GSCOCT00016263001 | |
| 24271 chr1 manual_curation CDS 35106505 35106642 . + 0 Parent=GSCOCT00016263001 | |
| 24272 chr1 manual_curation CDS 35105798 35106410 . + 2 Parent=GSCOCT00016263001 | |
| 24273 chr1 manual_curation CDS 35105527 35105692 . + 1 Parent=GSCOCT00016263001 | |
| 24274 chr1 manual_curation CDS 35105260 35105329 . + 0 Parent=GSCOCT00016263001 | |
| 24275 chr1 manual_curation CDS 35104929 35105041 . + 1 Parent=GSCOCT00016263001 | |
| 24276 chr1 manual_curation CDS 35104624 35104825 . + 0 Parent=GSCOCT00016263001 | |
| 24277 chr1 manual_curation CDS 35104416 35104490 . + 0 Parent=GSCOCT00016263001 | |
| 24278 chr1 manual_curation gene 35111429 35115383 . - . ID=GSCOCG00016262001;Name=Cc01_g17940 | |
| 24279 chr1 manual_curation mRNA 35111429 35115383 . - . ID=GSCOCT00016262001;Parent=GSCOCG00016262001;Name=Cc01_g17940 | |
| 24280 chr1 manual_curation polypeptide 35111607 35115383 . - . ID=GSCOCP00016262001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008266,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00109,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:Q8VZG8,SwissProt:Q9LP24,SwissProt:Q9LVP0,TAIR:AT1G35710.1,TAIR:AT4G08850.1,TAIR:AT5G63930.1,TrEMBL:B9SKP2,TrEMBL:F6HZP1,TrEMBL:F6HZP2;Derives_from=GSCOCT00016262001;Name=Cc01_g17940;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0004713,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable leucine-rich repeat receptor-like protein kinase At1g35710,CC_functional_completeness:complete,CC_gene:At1g35710,CC_gene:At4g08850,CC_gene:At5g63930;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016262001~ Putative Probable leucine-rich repeat receptor-like protein kinase At1g35710~ At1g35710~ complete;original_location=join(2135808..2136323%2C2136378..2136877%2C2137016..2137363%2C2137424..2139108%2C2139217..2139584);owner=coffea | |
| 24281 chr1 manual_curation exon 35114868 35115383 . - . Parent=GSCOCT00016262001 | |
| 24282 chr1 manual_curation exon 35114314 35114813 . - . Parent=GSCOCT00016262001 | |
| 24283 chr1 manual_curation exon 35113828 35114175 . - . Parent=GSCOCT00016262001 | |
| 24284 chr1 manual_curation exon 35112083 35113767 . - . Parent=GSCOCT00016262001 | |
| 24285 chr1 manual_curation exon 35111429 35111974 . - . Parent=GSCOCT00016262001 | |
| 24286 chr1 manual_curation CDS 35114868 35115383 . - 0 Parent=GSCOCT00016262001 | |
| 24287 chr1 manual_curation CDS 35114314 35114813 . - 0 Parent=GSCOCT00016262001 | |
| 24288 chr1 manual_curation CDS 35113828 35114175 . - 2 Parent=GSCOCT00016262001 | |
| 24289 chr1 manual_curation CDS 35112083 35113767 . - 2 Parent=GSCOCT00016262001 | |
| 24290 chr1 manual_curation CDS 35111607 35111974 . - 1 Parent=GSCOCT00016262001 | |
| 24291 chr1 manual_curation gene 35119272 35121624 . - . ID=GSCOCG00016261001;Name=Cc01_g17950 | |
| 24292 chr1 manual_curation mRNA 35119272 35121624 . - . ID=GSCOCT00016261001;Parent=GSCOCG00016261001;Name=Cc01_g17950 | |
| 24293 chr1 manual_curation polypeptide 35119344 35121349 . - . ID=GSCOCP00016261001;Dbxref=TAIR:AT1G04030.1,TAIR:AT2G30820.1,TAIR:AT5G44040.1,TrEMBL:B9GRF0,TrEMBL:B9SKP5,TrEMBL:F4I444,TrEMBL:F6HZN9,TrEMBL:I1L8G6,TrEMBL:I1LYN3,TrEMBL:I1LYN4;Derives_from=GSCOCT00016261001;Name=Cc01_g17950;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016261001~ Putative unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44040.1)%3B Has 1835 Blast hits to 1511 proteins in 238 species: Archae - 7%3B Bacteria - 164%3B Metazoa - 377%3B Fungi - 135%3B Plants - 187%3B Viruses - 22%3B Other Eukaryotes - 943 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(2129842..2129931%2C2130339..2130436%2C2130577..2131675%2C2131767..2131847);owner=coffea | |
| 24294 chr1 manual_curation exon 35121260 35121624 . - . Parent=GSCOCT00016261001 | |
| 24295 chr1 manual_curation exon 35120755 35120852 . - . Parent=GSCOCT00016261001 | |
| 24296 chr1 manual_curation exon 35119516 35120614 . - . Parent=GSCOCT00016261001 | |
| 24297 chr1 manual_curation exon 35119272 35119424 . - . Parent=GSCOCT00016261001 | |
| 24298 chr1 manual_curation CDS 35121260 35121349 . - 0 Parent=GSCOCT00016261001 | |
| 24299 chr1 manual_curation CDS 35120755 35120852 . - 0 Parent=GSCOCT00016261001 | |
| 24300 chr1 manual_curation CDS 35119516 35120614 . - 2 Parent=GSCOCT00016261001 | |
| 24301 chr1 manual_curation CDS 35119344 35119424 . - 0 Parent=GSCOCT00016261001 | |
| 24302 chr1 manual_curation gene 35123111 35126239 . + . ID=GSCOCG00016260001;Name=Cc01_g17960 | |
| 24303 chr1 manual_curation mRNA 35123111 35126239 . + . ID=GSCOCT00016260001;Parent=GSCOCG00016260001;Name=Cc01_g17960 | |
| 24304 chr1 manual_curation polypeptide 35123310 35125626 . + . ID=GSCOCP00016260001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR012677,PFAM:PF00076,PROFILE:PS50102,SMART:SM00360,SwissProt:Q920Q6,SwissProt:Q96DH6,SwissProt:Q9VVE5,TAIR:AT2G33410.1,TAIR:AT4G14300.1,TAIR:AT5G55550.3,TrEMBL:A5BK88,TrEMBL:F6HZN8,TrEMBL:I1NI06;Derives_from=GSCOCT00016260001;Name=Cc01_g17960;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:Msi2,CC_gene:MSI2,CC_gene:Rbp6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016260001~ Putative uncharacterized protein~ Msi2~ complete;original_location=complement(join(2127651..2127881%2C2126173..2126575%2C2125565..2126145));owner=coffea | |
| 24305 chr1 manual_curation exon 35125046 35126239 . + . Parent=GSCOCT00016260001 | |
| 24306 chr1 manual_curation exon 35124616 35125018 . + . Parent=GSCOCT00016260001 | |
| 24307 chr1 manual_curation exon 35123111 35123540 . + . Parent=GSCOCT00016260001 | |
| 24308 chr1 manual_curation CDS 35125046 35125626 . + 1 Parent=GSCOCT00016260001 | |
| 24309 chr1 manual_curation CDS 35124616 35125018 . + 0 Parent=GSCOCT00016260001 | |
| 24310 chr1 manual_curation CDS 35123310 35123540 . + 0 Parent=GSCOCT00016260001 | |
| 24311 chr1 manual_curation gene 35128010 35130424 . + . ID=GSCOCG00016259001;Name=Cc01_g17970 | |
| 24312 chr1 manual_curation mRNA 35128010 35130424 . + . ID=GSCOCT00016259001;Parent=GSCOCG00016259001;Name=Cc01_g17970 | |
| 24313 chr1 manual_curation polypeptide 35128010 35130424 . + . ID=GSCOCP00016259001;Dbxref=InterPro:IPR000109,InterPro:IPR016196,PFAM:PF00854,SUPERFAMILY:SSF103473,SwissProt:Q8VZR7,SwissProt:Q9FNL7,SwissProt:Q9FNL8,TAIR:AT2G40460.1,TAIR:AT5G46040.1,TAIR:AT5G46050.1,TrEMBL:B9GRF4,TrEMBL:B9SKP8,TrEMBL:B9SKP9;Derives_from=GSCOCT00016259001;Name=Cc01_g17970;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006857,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Peptide transporter PTR3-A,CC_functional_completeness:complete,CC_gene:PTR3-A,CC_gene:PTR3-B,CC_gene:At2g40460;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016259001~ Peptide transporter PTR3-A~ PTR3-A~ complete;original_location=complement(join(2123046..2123181%2C2122683..2122900%2C2121961..2122532%2C2120767..2121640));owner=coffea | |
| 24314 chr1 manual_curation exon 35129551 35130424 . + . Parent=GSCOCT00016259001 | |
| 24315 chr1 manual_curation exon 35128659 35129230 . + . Parent=GSCOCT00016259001 | |
| 24316 chr1 manual_curation exon 35128291 35128508 . + . Parent=GSCOCT00016259001 | |
| 24317 chr1 manual_curation exon 35128010 35128145 . + . Parent=GSCOCT00016259001 | |
| 24318 chr1 manual_curation CDS 35129551 35130424 . + 2 Parent=GSCOCT00016259001 | |
| 24319 chr1 manual_curation CDS 35128659 35129230 . + 0 Parent=GSCOCT00016259001 | |
| 24320 chr1 manual_curation CDS 35128291 35128508 . + 1 Parent=GSCOCT00016259001 | |
| 24321 chr1 manual_curation CDS 35128010 35128145 . + 0 Parent=GSCOCT00016259001 | |
| 24322 chr1 manual_curation gene 35130561 35136304 . - . ID=GSCOCG00016258001;Name=Cc01_g17980 | |
| 24323 chr1 manual_curation mRNA 35130561 35136304 . - . ID=GSCOCT00016258001;Parent=GSCOCG00016258001;Name=Cc01_g17980 | |
| 24324 chr1 manual_curation polypeptide 35130823 35136053 . - . ID=GSCOCP00016258001;Dbxref=InterPro:IPR001357,InterPro:IPR001841,InterPro:IPR017907,PFAM:PF00533,PROFILE:PS50089,PROFILE:PS50172,PROSITE:PS00518,SMART:SM00184,SMART:SM00292,SUPERFAMILY:SSF52113,SwissProt:O70445,SwissProt:Q8RXD4,SwissProt:Q9QZH2,TAIR:AT1G04020.1,TAIR:AT4G21070.1,TrEMBL:B9SKQ1,TrEMBL:G7KXD0,TrEMBL:I1N9T1;Derives_from=GSCOCT00016258001;Name=Cc01_g17980;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0005622,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein BREAST CANCER SUSCEPTIBILITY 1 homolog,CC_functional_completeness:fragment,CC_gene:BRCA1,CC_gene:Bard1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016258001~ Putative Protein BREAST CANCER SUSCEPTIBILITY 1 homolog~ BRCA1~ fragment;original_location=join(2115138..2115226%2C2115348..2115401%2C2115519..2115589%2C2115932..2116027%2C2116130..2116425%2C2116836..2117171%2C2117332..2117432%2C2117904..2118090%2C2118203..2118315%2C2118476..2118566%2C2119206..2119371%2C2119572..2119690%2C2120024..2120368);owner=coffea | |
| 24325 chr1 manual_curation exon 35135965 35136304 . - . Parent=GSCOCT00016258001 | |
| 24326 chr1 manual_curation exon 35135790 35135843 . - . Parent=GSCOCT00016258001 | |
| 24327 chr1 manual_curation exon 35135602 35135672 . - . Parent=GSCOCT00016258001 | |
| 24328 chr1 manual_curation exon 35135164 35135259 . - . Parent=GSCOCT00016258001 | |
| 24329 chr1 manual_curation exon 35134766 35135061 . - . Parent=GSCOCT00016258001 | |
| 24330 chr1 manual_curation exon 35134020 35134355 . - . Parent=GSCOCT00016258001 | |
| 24331 chr1 manual_curation exon 35133759 35133859 . - . Parent=GSCOCT00016258001 | |
| 24332 chr1 manual_curation exon 35133101 35133287 . - . Parent=GSCOCT00016258001 | |
| 24333 chr1 manual_curation exon 35132876 35132988 . - . Parent=GSCOCT00016258001 | |
| 24334 chr1 manual_curation exon 35132625 35132715 . - . Parent=GSCOCT00016258001 | |
| 24335 chr1 manual_curation exon 35131820 35131985 . - . Parent=GSCOCT00016258001 | |
| 24336 chr1 manual_curation exon 35131501 35131619 . - . Parent=GSCOCT00016258001 | |
| 24337 chr1 manual_curation exon 35130561 35131167 . - . Parent=GSCOCT00016258001 | |
| 24338 chr1 manual_curation CDS 35135965 35136053 . - 0 Parent=GSCOCT00016258001 | |
| 24339 chr1 manual_curation CDS 35135790 35135843 . - 2 Parent=GSCOCT00016258001 | |
| 24340 chr1 manual_curation CDS 35135602 35135672 . - 2 Parent=GSCOCT00016258001 | |
| 24341 chr1 manual_curation CDS 35135164 35135259 . - 1 Parent=GSCOCT00016258001 | |
| 24342 chr1 manual_curation CDS 35134766 35135061 . - 1 Parent=GSCOCT00016258001 | |
| 24343 chr1 manual_curation CDS 35134020 35134355 . - 0 Parent=GSCOCT00016258001 | |
| 24344 chr1 manual_curation CDS 35133759 35133859 . - 0 Parent=GSCOCT00016258001 | |
| 24345 chr1 manual_curation CDS 35133101 35133287 . - 2 Parent=GSCOCT00016258001 | |
| 24346 chr1 manual_curation CDS 35132876 35132988 . - 0 Parent=GSCOCT00016258001 | |
| 24347 chr1 manual_curation CDS 35132625 35132715 . - 2 Parent=GSCOCT00016258001 | |
| 24348 chr1 manual_curation CDS 35131820 35131985 . - 0 Parent=GSCOCT00016258001 | |
| 24349 chr1 manual_curation CDS 35131501 35131619 . - 1 Parent=GSCOCT00016258001 | |
| 24350 chr1 manual_curation CDS 35130823 35131167 . - 0 Parent=GSCOCT00016258001 | |
| 24351 chr1 manual_curation gene 35153110 35155211 . + . ID=GSCOCG00016257001;Name=Cc01_g17990 | |
| 24352 chr1 manual_curation mRNA 35153110 35155211 . + . ID=GSCOCT00016257001;Parent=GSCOCG00016257001;Name=Cc01_g17990 | |
| 24353 chr1 manual_curation polypeptide 35153276 35154970 . + . ID=GSCOCP00016257001;Dbxref=SwissProt:Q38732,SwissProt:Q9LKA5,TAIR:AT1G32580.1,TAIR:AT2G33430.1,TAIR:AT2G35240.1,TrEMBL:A5BJL9,TrEMBL:A9PHD1,TrEMBL:F6HZN4;Derives_from=GSCOCT00016257001;Name=Cc01_g17990;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized protein At3g15000%2C mitochondrial,CC_functional_completeness:fragment,CC_gene:DAG,CC_gene:At3g15000;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016257001~ Putative Uncharacterized protein At3g15000%2C mitochondrial~ DAG~ fragment;original_location=complement(join(2097485..2097915%2C2097247..2097344%2C2097047..2097112%2C2096221..2096363));owner=coffea | |
| 24354 chr1 manual_curation exon 35154828 35155211 . + . Parent=GSCOCT00016257001 | |
| 24355 chr1 manual_curation exon 35154079 35154144 . + . Parent=GSCOCT00016257001 | |
| 24356 chr1 manual_curation exon 35153847 35153944 . + . Parent=GSCOCT00016257001 | |
| 24357 chr1 manual_curation exon 35153110 35153706 . + . Parent=GSCOCT00016257001 | |
| 24358 chr1 manual_curation CDS 35154828 35154970 . + 1 Parent=GSCOCT00016257001 | |
| 24359 chr1 manual_curation CDS 35154079 35154144 . + 1 Parent=GSCOCT00016257001 | |
| 24360 chr1 manual_curation CDS 35153847 35153944 . + 2 Parent=GSCOCT00016257001 | |
| 24361 chr1 manual_curation CDS 35153276 35153706 . + 0 Parent=GSCOCT00016257001 | |
| 24362 chr1 manual_curation gene 35155384 35161878 . - . ID=GSCOCG00016256001;Name=Cc01_g18000 | |
| 24363 chr1 manual_curation mRNA 35155384 35161878 . - . ID=GSCOCT00016256001;Parent=GSCOCG00016256001;Name=Cc01_g18000 | |
| 24364 chr1 manual_curation polypeptide 35155937 35161538 . - . ID=GSCOCP00016256001;Dbxref=InterPro:IPR014812,PFAM:PF08700,TAIR:AT1G10180.1,TAIR:AT1G10385.1,TAIR:AT5G49830.2,TrEMBL:B9IBE7,TrEMBL:B9SKQ2,TrEMBL:I1LYN3;Derives_from=GSCOCT00016256001;Name=Cc01_g18000;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016256001~ Putative BEST Arabidopsis thaliana protein match is: exocyst complex component 84B (TAIR:AT5G49830.1)%3B Has 132 Blast hits to 132 proteins in 25 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 7%3B Fungi - 0%3B Plants - 117%3B Viruses - 0%3B Other Eukaryotes - 8 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(2089653..2089793%2C2089934..2090031%2C2090399..2091452%2C2092012..2092464%2C2092952..2093137%2C2093765..2093898%2C2094802..2095124%2C2095211..2095254);owner=coffea | |
| 24365 chr1 manual_curation exon 35161398 35161878 . - . Parent=GSCOCT00016256001 | |
| 24366 chr1 manual_curation exon 35161160 35161257 . - . Parent=GSCOCT00016256001 | |
| 24367 chr1 manual_curation exon 35159739 35160792 . - . Parent=GSCOCT00016256001 | |
| 24368 chr1 manual_curation exon 35158727 35159179 . - . Parent=GSCOCT00016256001 | |
| 24369 chr1 manual_curation exon 35158054 35158239 . - . Parent=GSCOCT00016256001 | |
| 24370 chr1 manual_curation exon 35157293 35157426 . - . Parent=GSCOCT00016256001 | |
| 24371 chr1 manual_curation exon 35156067 35156389 . - . Parent=GSCOCT00016256001 | |
| 24372 chr1 manual_curation exon 35155384 35155980 . - . Parent=GSCOCT00016256001 | |
| 24373 chr1 manual_curation CDS 35161398 35161538 . - 0 Parent=GSCOCT00016256001 | |
| 24374 chr1 manual_curation CDS 35161160 35161257 . - 0 Parent=GSCOCT00016256001 | |
| 24375 chr1 manual_curation CDS 35159739 35160792 . - 2 Parent=GSCOCT00016256001 | |
| 24376 chr1 manual_curation CDS 35158727 35159179 . - 0 Parent=GSCOCT00016256001 | |
| 24377 chr1 manual_curation CDS 35158054 35158239 . - 0 Parent=GSCOCT00016256001 | |
| 24378 chr1 manual_curation CDS 35157293 35157426 . - 0 Parent=GSCOCT00016256001 | |
| 24379 chr1 manual_curation CDS 35156067 35156389 . - 2 Parent=GSCOCT00016256001 | |
| 24380 chr1 manual_curation CDS 35155937 35155980 . - 1 Parent=GSCOCT00016256001 | |
| 24381 chr1 manual_curation gene 35164705 35171095 . + . ID=GSCOCG00016255001;Name=Cc01_g18010 | |
| 24382 chr1 manual_curation mRNA 35164705 35171095 . + . ID=GSCOCT00016255001;Parent=GSCOCG00016255001;Name=Cc01_g18010 | |
| 24383 chr1 manual_curation polypeptide 35164705 35171095 . + . ID=GSCOCP00016255001;Dbxref=InterPro:IPR003386,PANTHER:PTHR11440,PFAM:PF02450,SwissProt:O94680,SwissProt:P40345,SwissProt:Q4VCM1,TAIR:AT1G04010.1,TAIR:AT5G13640.1,TrEMBL:D7U341,TrEMBL:G7KWE0,TrEMBL:Q8GZM5;Derives_from=GSCOCT00016255001;Name=Cc01_g18010;Ontology_term=CC_evidence_code:ISS,GO:0004607,GO:0006629,CC_EC_number:2.3.1.158,PRODUCT:Phospholipid--sterol O-acyltransferase,CC_functional_completeness:complete,CC_gene:PSAT,CC_gene:plh1,CC_gene:LRO1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016255001~ Phospholipid--sterol O-acyltransferase~ PSAT~ complete;original_location=complement(join(2086211..2086486%2C2085688..2085823%2C2085417..2085561%2C2085055..2085224%2C2084890..2084966%2C2083995..2084208%2C2083740..2083914%2C2083435..2083534%2C2082622..2082716%2C2082017..2082068%2C2081827..2081898%2C2081145..2081313%2C2080449..2080553%2C2080274..2080358%2C2080096..2080177));owner=coffea | |
| 24384 chr1 manual_curation exon 35171014 35171095 . + . Parent=GSCOCT00016255001 | |
| 24385 chr1 manual_curation exon 35170833 35170917 . + . Parent=GSCOCT00016255001 | |
| 24386 chr1 manual_curation exon 35170638 35170742 . + . Parent=GSCOCT00016255001 | |
| 24387 chr1 manual_curation exon 35169878 35170046 . + . Parent=GSCOCT00016255001 | |
| 24388 chr1 manual_curation exon 35169293 35169364 . + . Parent=GSCOCT00016255001 | |
| 24389 chr1 manual_curation exon 35169123 35169174 . + . Parent=GSCOCT00016255001 | |
| 24390 chr1 manual_curation exon 35168475 35168569 . + . Parent=GSCOCT00016255001 | |
| 24391 chr1 manual_curation exon 35167657 35167756 . + . Parent=GSCOCT00016255001 | |
| 24392 chr1 manual_curation exon 35167277 35167451 . + . Parent=GSCOCT00016255001 | |
| 24393 chr1 manual_curation exon 35166983 35167196 . + . Parent=GSCOCT00016255001 | |
| 24394 chr1 manual_curation exon 35166225 35166301 . + . Parent=GSCOCT00016255001 | |
| 24395 chr1 manual_curation exon 35165967 35166136 . + . Parent=GSCOCT00016255001 | |
| 24396 chr1 manual_curation exon 35165630 35165774 . + . Parent=GSCOCT00016255001 | |
| 24397 chr1 manual_curation exon 35165368 35165503 . + . Parent=GSCOCT00016255001 | |
| 24398 chr1 manual_curation exon 35164705 35164980 . + . Parent=GSCOCT00016255001 | |
| 24399 chr1 manual_curation CDS 35171014 35171095 . + 2 Parent=GSCOCT00016255001 | |
| 24400 chr1 manual_curation CDS 35170833 35170917 . + 1 Parent=GSCOCT00016255001 | |
| 24401 chr1 manual_curation CDS 35170638 35170742 . + 1 Parent=GSCOCT00016255001 | |
| 24402 chr1 manual_curation CDS 35169878 35170046 . + 0 Parent=GSCOCT00016255001 | |
| 24403 chr1 manual_curation CDS 35169293 35169364 . + 0 Parent=GSCOCT00016255001 | |
| 24404 chr1 manual_curation CDS 35169123 35169174 . + 2 Parent=GSCOCT00016255001 | |
| 24405 chr1 manual_curation CDS 35168475 35168569 . + 0 Parent=GSCOCT00016255001 | |
| 24406 chr1 manual_curation CDS 35167657 35167756 . + 2 Parent=GSCOCT00016255001 | |
| 24407 chr1 manual_curation CDS 35167277 35167451 . + 1 Parent=GSCOCT00016255001 | |
| 24408 chr1 manual_curation CDS 35166983 35167196 . + 0 Parent=GSCOCT00016255001 | |
| 24409 chr1 manual_curation CDS 35166225 35166301 . + 1 Parent=GSCOCT00016255001 | |
| 24410 chr1 manual_curation CDS 35165967 35166136 . + 2 Parent=GSCOCT00016255001 | |
| 24411 chr1 manual_curation CDS 35165630 35165774 . + 1 Parent=GSCOCT00016255001 | |
| 24412 chr1 manual_curation CDS 35165368 35165503 . + 0 Parent=GSCOCT00016255001 | |
| 24413 chr1 manual_curation CDS 35164705 35164980 . + 0 Parent=GSCOCT00016255001 | |
| 24414 chr1 manual_curation gene 35171227 35175859 . - . ID=GSCOCG00016254001;Name=Cc01_g18020 | |
| 24415 chr1 manual_curation mRNA 35171227 35175859 . - . ID=GSCOCT00016254001;Parent=GSCOCG00016254001;Name=Cc01_g18020 | |
| 24416 chr1 manual_curation polypeptide 35172431 35175526 . - . ID=GSCOCP00016254001;Dbxref=GENE3D:G3DSA:2.70.50.30,InterPro:IPR000406,InterPro:IPR014756,PANTHER:PTHR10980,PFAM:PF02115,PRINTS:PR00492,SUPERFAMILY:SSF81296,SwissProt:P19803,SwissProt:Q95UQ1,SwissProt:Q9SFC6,TAIR:AT1G12070.1,TAIR:AT1G62450.1,TAIR:AT3G07880.1,TrEMBL:A9PI76,TrEMBL:B9GRF8,TrEMBL:Q9M404;Derives_from=GSCOCT00016254001;Name=Cc01_g18020;Ontology_term=CC_evidence_code:ISS,GO:0005094,GO:0005737,CC_EC_number:missing_EC_number,PRODUCT:Putative rho GDP-dissociation inhibitor 1,CC_functional_completeness:modules,CC_gene:GDI1,CC_gene:rdiA,CC_gene:ARHGDIA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016254001~ Putative rho GDP-dissociation inhibitor 1~ GDI1~ modules;original_location=join(2075665..2075907%2C2076840..2076903%2C2077393..2077614%2C2078389..2078513%2C2078689..2078760);owner=coffea | |
| 24417 chr1 manual_curation exon 35175284 35175859 . - . Parent=GSCOCT00016254001 | |
| 24418 chr1 manual_curation exon 35174288 35174351 . - . Parent=GSCOCT00016254001 | |
| 24419 chr1 manual_curation exon 35173577 35173798 . - . Parent=GSCOCT00016254001 | |
| 24420 chr1 manual_curation exon 35172678 35172802 . - . Parent=GSCOCT00016254001 | |
| 24421 chr1 manual_curation exon 35171227 35172502 . - . Parent=GSCOCT00016254001 | |
| 24422 chr1 manual_curation CDS 35175284 35175526 . - 0 Parent=GSCOCT00016254001 | |
| 24423 chr1 manual_curation CDS 35174288 35174351 . - 0 Parent=GSCOCT00016254001 | |
| 24424 chr1 manual_curation CDS 35173577 35173798 . - 1 Parent=GSCOCT00016254001 | |
| 24425 chr1 manual_curation CDS 35172678 35172802 . - 1 Parent=GSCOCT00016254001 | |
| 24426 chr1 manual_curation CDS 35172431 35172502 . - 0 Parent=GSCOCT00016254001 | |
| 24427 chr1 manual_curation gene 35176577 35182251 . - . ID=GSCOCG00016253001;Name=Cc01_g18030 | |
| 24428 chr1 manual_curation mRNA 35176577 35182251 . - . ID=GSCOCT00016253001;Parent=GSCOCG00016253001;Name=Cc01_g18030 | |
| 24429 chr1 manual_curation polypeptide 35176888 35181171 . - . ID=GSCOCP00016253001;Dbxref=GENE3D:G3DSA:1.25.40.10,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR019734,PROFILE:PS50005,PROFILE:PS50293,SMART:SM00028,SwissProt:Q8BGB2,SwissProt:Q9ULT0,TAIR:AT1G27460.1,TAIR:AT2G43040.1,TAIR:AT4G28600.1,TrEMBL:A5BC29,TrEMBL:B9SKQ6,TrEMBL:F6HZM7;Derives_from=GSCOCT00016253001;Name=Cc01_g18030;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:no pollen germination related 2,CC_functional_completeness:complete,CC_gene:TTC7A,CC_gene:Ttc7a;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016253001~ no pollen germination related 2~ TTC7A~ complete;original_location=join(2070020..2070277%2C2070378..2070630%2C2071399..2072612%2C2073115..2073268%2C2073987..2074303);owner=coffea | |
| 24430 chr1 manual_curation exon 35181817 35182251 . - . Parent=GSCOCT00016253001 | |
| 24431 chr1 manual_curation exon 35180914 35181181 . - . Parent=GSCOCT00016253001 | |
| 24432 chr1 manual_curation exon 35180561 35180813 . - . Parent=GSCOCT00016253001 | |
| 24433 chr1 manual_curation exon 35178579 35179792 . - . Parent=GSCOCT00016253001 | |
| 24434 chr1 manual_curation exon 35177923 35178076 . - . Parent=GSCOCT00016253001 | |
| 24435 chr1 manual_curation exon 35176577 35177204 . - . Parent=GSCOCT00016253001 | |
| 24436 chr1 manual_curation CDS 35180914 35181171 . - 0 Parent=GSCOCT00016253001 | |
| 24437 chr1 manual_curation CDS 35180561 35180813 . - 0 Parent=GSCOCT00016253001 | |
| 24438 chr1 manual_curation CDS 35178579 35179792 . - 1 Parent=GSCOCT00016253001 | |
| 24439 chr1 manual_curation CDS 35177923 35178076 . - 0 Parent=GSCOCT00016253001 | |
| 24440 chr1 manual_curation CDS 35176888 35177204 . - 1 Parent=GSCOCT00016253001 | |
| 24441 chr1 manual_curation gene 35196047 35202089 . + . ID=GSCOCG00016251001;Name=Cc01_g18040 | |
| 24442 chr1 manual_curation mRNA 35196047 35202089 . + . ID=GSCOCT00016251001;Parent=GSCOCG00016251001;Name=Cc01_g18040 | |
| 24443 chr1 manual_curation polypeptide 35196303 35201600 . + . ID=GSCOCP00016251001;Dbxref=GENE3D:G3DSA:3.30.470.20,GENE3D:G3DSA:3.40.50.261,InterPro:IPR005809,InterPro:IPR005811,InterPro:IPR011761,InterPro:IPR013650,InterPro:IPR013816,InterPro:IPR016102,InterPro:IPR017866,PANTHER:PTHR11815,PFAM:PF00549,PFAM:PF08442,PROFILE:PS50975,PROSITE:PS01217,SUPERFAMILY:SSF52210,SwissProt:O82662,SwissProt:Q6K9N6,SwissProt:Q84LB6,TAIR:AT2G20420.1,TIGRFAMs:TIGR01016,TrEMBL:A5BF93,TrEMBL:B9GRX6,TrEMBL:Q2PYW7;Derives_from=GSCOCT00016251001;Name=Cc01_g18040;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005524,GO:0008152,CC_EC_number:6.2.1.4,PRODUCT:Succinyl-CoA ligase [ADP-forming] subunit beta%2C mitochondrial,CC_functional_completeness:complete,CC_gene:Os02g0621700,CC_gene:At2g20420;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016251001~ Succinyl-CoA ligase [ADP-forming] subunit beta%2C mitochondrial~ Os02g0621700~ complete;original_location=complement(join(2054787..2054888%2C2054435..2054545%2C2054142..2054253%2C2053569..2053633%2C2052550..2052627%2C2051196..2051270%2C2050919..2051071%2C2050643..2050777%2C2050398..2050562%2C2050091..2050213%2C2049783..2049854%2C2049591..2049665));owner=coffea | |
| 24444 chr1 manual_curation exon 35201526 35202089 . + . Parent=GSCOCT00016251001 | |
| 24445 chr1 manual_curation exon 35201337 35201408 . + . Parent=GSCOCT00016251001 | |
| 24446 chr1 manual_curation exon 35200978 35201100 . + . Parent=GSCOCT00016251001 | |
| 24447 chr1 manual_curation exon 35200629 35200793 . + . Parent=GSCOCT00016251001 | |
| 24448 chr1 manual_curation exon 35200414 35200548 . + . Parent=GSCOCT00016251001 | |
| 24449 chr1 manual_curation exon 35200120 35200272 . + . Parent=GSCOCT00016251001 | |
| 24450 chr1 manual_curation exon 35199921 35199995 . + . Parent=GSCOCT00016251001 | |
| 24451 chr1 manual_curation exon 35198564 35198641 . + . Parent=GSCOCT00016251001 | |
| 24452 chr1 manual_curation exon 35197558 35197622 . + . Parent=GSCOCT00016251001 | |
| 24453 chr1 manual_curation exon 35196938 35197049 . + . Parent=GSCOCT00016251001 | |
| 24454 chr1 manual_curation exon 35196646 35196756 . + . Parent=GSCOCT00016251001 | |
| 24455 chr1 manual_curation exon 35196047 35196404 . + . Parent=GSCOCT00016251001 | |
| 24456 chr1 manual_curation CDS 35201526 35201600 . + 0 Parent=GSCOCT00016251001 | |
| 24457 chr1 manual_curation CDS 35201337 35201408 . + 0 Parent=GSCOCT00016251001 | |
| 24458 chr1 manual_curation CDS 35200978 35201100 . + 0 Parent=GSCOCT00016251001 | |
| 24459 chr1 manual_curation CDS 35200629 35200793 . + 0 Parent=GSCOCT00016251001 | |
| 24460 chr1 manual_curation CDS 35200414 35200548 . + 0 Parent=GSCOCT00016251001 | |
| 24461 chr1 manual_curation CDS 35200120 35200272 . + 0 Parent=GSCOCT00016251001 | |
| 24462 chr1 manual_curation CDS 35199921 35199995 . + 0 Parent=GSCOCT00016251001 | |
| 24463 chr1 manual_curation CDS 35198564 35198641 . + 0 Parent=GSCOCT00016251001 | |
| 24464 chr1 manual_curation CDS 35197558 35197622 . + 1 Parent=GSCOCT00016251001 | |
| 24465 chr1 manual_curation CDS 35196938 35197049 . + 0 Parent=GSCOCT00016251001 | |
| 24466 chr1 manual_curation CDS 35196646 35196756 . + 0 Parent=GSCOCT00016251001 | |
| 24467 chr1 manual_curation CDS 35196303 35196404 . + 0 Parent=GSCOCT00016251001 | |
| 24468 chr1 manual_curation gene 35202257 35206436 . - . ID=GSCOCG00016250001;Name=Cc01_g18050 | |
| 24469 chr1 manual_curation mRNA 35202257 35206436 . - . ID=GSCOCT00016250001;Parent=GSCOCG00016250001;Name=Cc01_g18050 | |
| 24470 chr1 manual_curation polypeptide 35202762 35206321 . - . ID=GSCOCP00016250001;Dbxref=InterPro:IPR000172,InterPro:IPR007867,InterPro:IPR012400,PFAM:PF00732,PFAM:PF05199,PIR:PIRSF028937,SwissProt:B5WWZ8,SwissProt:B5WWZ9,SwissProt:Q94BP3,TAIR:AT1G03990.1,TAIR:AT3G23410.1,TAIR:AT4G28570.1,TrEMBL:B9SV13,TrEMBL:C6F118,TrEMBL:I1N9S7;Derives_from=GSCOCT00016250001;Name=Cc01_g18050;Ontology_term=CC_evidence_code:ISS,GO:0050660,CC_EC_number:missing_EC_number,PRODUCT:Long-chain-alcohol oxidase FAO2,CC_functional_completeness:complete,CC_gene:FAO2,CC_gene:FAO4B,CC_gene:FAO1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016250001~ Long-chain-alcohol oxidase FAO2~ FAO2~ complete;original_location=join(2044870..2045124%2C2045262..2045534%2C2046600..2048337%2C2048395..2048429);owner=coffea | |
| 24471 chr1 manual_curation exon 35206067 35206436 . - . Parent=GSCOCT00016250001 | |
| 24472 chr1 manual_curation exon 35205657 35205929 . - . Parent=GSCOCT00016250001 | |
| 24473 chr1 manual_curation exon 35202854 35204591 . - . Parent=GSCOCT00016250001 | |
| 24474 chr1 manual_curation exon 35202257 35202796 . - . Parent=GSCOCT00016250001 | |
| 24475 chr1 manual_curation CDS 35206067 35206321 . - 0 Parent=GSCOCT00016250001 | |
| 24476 chr1 manual_curation CDS 35205657 35205929 . - 0 Parent=GSCOCT00016250001 | |
| 24477 chr1 manual_curation CDS 35202854 35204591 . - 0 Parent=GSCOCT00016250001 | |
| 24478 chr1 manual_curation CDS 35202762 35202796 . - 1 Parent=GSCOCT00016250001 | |
| 24479 chr1 manual_curation gene 35218309 35224271 . - . ID=GSCOCG00016249001;Name=Cc01_g18060 | |
| 24480 chr1 manual_curation mRNA 35218309 35224271 . - . ID=GSCOCT00016249001;Parent=GSCOCG00016249001;Name=Cc01_g18060 | |
| 24481 chr1 manual_curation polypeptide 35218996 35224108 . - . ID=GSCOCP00016249001;Dbxref=InterPro:IPR007719,InterPro:IPR015407,PFAM:PF05023,PFAM:PF09328,PROFILE:PS51443,SwissProt:Q2TSC7,SwissProt:Q9S7Z3,SwissProt:Q9ZWB7,TAIR:AT1G03980.1,TAIR:AT5G44070.1,TrEMBL:A9LMJ7,TrEMBL:Q84JR4,TrEMBL:Q84UY7;Derives_from=GSCOCT00016249001;Name=Cc01_g18060;Ontology_term=CC_evidence_code:ISS,GO:0010038,GO:0016756,GO:0046872,GO:0046938,CC_EC_number:2.3.2.15,PRODUCT:Glutathione gamma-glutamylcysteinyltransferase 1,CC_functional_completeness:complete,CC_gene:PCS1,CC_gene:PCS2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016249001~ Glutathione gamma-glutamylcysteinyltransferase 1~ PCS1~ complete;original_location=join(2027083..2027157%2C2027887..2028043%2C2028724..2028962%2C2029792..2029955%2C2030553..2030604%2C2030759..2030986%2C2031158..2031661%2C2032112..2032195);owner=coffea | |
| 24482 chr1 manual_curation exon 35224034 35224271 . - . Parent=GSCOCT00016249001 | |
| 24483 chr1 manual_curation exon 35223148 35223304 . - . Parent=GSCOCT00016249001 | |
| 24484 chr1 manual_curation exon 35222229 35222467 . - . Parent=GSCOCT00016249001 | |
| 24485 chr1 manual_curation exon 35221236 35221399 . - . Parent=GSCOCT00016249001 | |
| 24486 chr1 manual_curation exon 35220587 35220638 . - . Parent=GSCOCT00016249001 | |
| 24487 chr1 manual_curation exon 35220205 35220432 . - . Parent=GSCOCT00016249001 | |
| 24488 chr1 manual_curation exon 35219530 35220033 . - . Parent=GSCOCT00016249001 | |
| 24489 chr1 manual_curation exon 35218309 35219079 . - . Parent=GSCOCT00016249001 | |
| 24490 chr1 manual_curation CDS 35224034 35224108 . - 0 Parent=GSCOCT00016249001 | |
| 24491 chr1 manual_curation CDS 35223148 35223304 . - 0 Parent=GSCOCT00016249001 | |
| 24492 chr1 manual_curation CDS 35222229 35222467 . - 1 Parent=GSCOCT00016249001 | |
| 24493 chr1 manual_curation CDS 35221236 35221399 . - 0 Parent=GSCOCT00016249001 | |
| 24494 chr1 manual_curation CDS 35220587 35220638 . - 2 Parent=GSCOCT00016249001 | |
| 24495 chr1 manual_curation CDS 35220205 35220432 . - 0 Parent=GSCOCT00016249001 | |
| 24496 chr1 manual_curation CDS 35219530 35220033 . - 0 Parent=GSCOCT00016249001 | |
| 24497 chr1 manual_curation CDS 35218996 35219079 . - 0 Parent=GSCOCT00016249001 | |
| 24498 chr1 manual_curation gene 35229272 35230660 . + . ID=GSCOCG00016248001;Name=Cc01_g18070 | |
| 24499 chr1 manual_curation mRNA 35229272 35230660 . + . ID=GSCOCT00016248001;Parent=GSCOCG00016248001;Name=Cc01_g18070 | |
| 24500 chr1 manual_curation polypeptide 35229272 35230660 . + . ID=GSCOCP00016248001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,PFAM:PF00560,SMART:SM00369,SwissProt:P93194,SwissProt:Q5PP26,SwissProt:Q9SSD1,TAIR:AT1G13230.1,TAIR:AT3G25670.1,TAIR:AT4G28560.1,TrEMBL:A5C2Z6,TrEMBL:B9H8Q7,TrEMBL:B9SV17;Derives_from=GSCOCT00016248001;Name=Cc01_g18070;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative Piriformospora indica-insensitive protein 2,CC_functional_completeness:complete,CC_gene:PII-2,CC_gene:TMM,CC_gene:INRPK1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016248001~ Putative Piriformospora indica-insensitive protein 2~ PII-2~ complete;original_location=complement(2020531..2021919);owner=coffea | |
| 24501 chr1 manual_curation exon 35229272 35230660 . + . Parent=GSCOCT00016248001 | |
| 24502 chr1 manual_curation CDS 35229272 35230660 . + 0 Parent=GSCOCT00016248001 | |
| 24503 chr1 manual_curation gene 35231398 35232993 . - . ID=GSCOCG00016247001;Name=Cc01_g18080 | |
| 24504 chr1 manual_curation mRNA 35231398 35232993 . - . ID=GSCOCT00016247001;Parent=GSCOCG00016247001;Name=Cc01_g18080 | |
| 24505 chr1 manual_curation polypeptide 35231398 35232993 . - . ID=GSCOCP00016247001;Dbxref=InterPro:IPR000095,PFAM:PF00786,PROFILE:PS50108,SMART:SM00285,TAIR:AT2G20430.1,TAIR:AT2G33460.1,TAIR:AT3G23380.1,TrEMBL:B9SV18,TrEMBL:C6TBJ3,TrEMBL:I1LYM9;Derives_from=GSCOCT00016247001;Name=Cc01_g18080;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative ROP-interactive CRIB motif-containing protein 6,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016247001~ Putative ROP-interactive CRIB motif-containing protein 6~ unknown_gene~ complete;original_location=join(2018198..2018255%2C2018334..2018434%2C2018903..2019008%2C2019339..2019793);owner=coffea | |
| 24506 chr1 manual_curation exon 35232936 35232993 . - . Parent=GSCOCT00016247001 | |
| 24507 chr1 manual_curation exon 35232757 35232857 . - . Parent=GSCOCT00016247001 | |
| 24508 chr1 manual_curation exon 35232183 35232288 . - . Parent=GSCOCT00016247001 | |
| 24509 chr1 manual_curation exon 35231398 35231852 . - . Parent=GSCOCT00016247001 | |
| 24510 chr1 manual_curation CDS 35232936 35232993 . - 0 Parent=GSCOCT00016247001 | |
| 24511 chr1 manual_curation CDS 35232757 35232857 . - 1 Parent=GSCOCT00016247001 | |
| 24512 chr1 manual_curation CDS 35232183 35232288 . - 0 Parent=GSCOCT00016247001 | |
| 24513 chr1 manual_curation CDS 35231398 35231852 . - 1 Parent=GSCOCT00016247001 | |
| 24514 chr1 manual_curation gene 35233805 35236920 . - . ID=GSCOCG00016246001;Name=Cc01_g18090 | |
| 24515 chr1 manual_curation mRNA 35233805 35236920 . - . ID=GSCOCT00016246001;Parent=GSCOCG00016246001;Name=Cc01_g18090 | |
| 24516 chr1 manual_curation polypeptide 35234334 35236244 . - . ID=GSCOCP00016246001;Dbxref=InterPro:IPR014830,PFAM:PF08718,SUPERFAMILY:SSF110004,SwissProt:Q5U3N0,SwissProt:Q80W71,SwissProt:Q96JA3,TAIR:AT1G21360.1,TAIR:AT2G33470.1,TAIR:AT3G21260.3,TrEMBL:B6T6M9,TrEMBL:C5XXS7,TrEMBL:G3MLZ5;Derives_from=GSCOCT00016246001;Name=Cc01_g18090;Ontology_term=CC_evidence_code:ISS,GO:0005737,GO:0017089,GO:0046836,GO:0051861,CC_EC_number:missing_EC_number,PRODUCT:Putative Pleckstrin homology domain-containing family A member 8,CC_functional_completeness:fragment,CC_gene:plekha8,CC_gene:Plekha8,CC_gene:PLEKHA8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016246001~ Putative Pleckstrin homology domain-containing family A member 8~ plekha8~ fragment;original_location=join(2014947..2015064%2C2015473..2015528%2C2016004..2016134%2C2016327..2016462%2C2016544..2016675%2C2016822..2016857);owner=coffea | |
| 24517 chr1 manual_curation exon 35236127 35236920 . - . Parent=GSCOCT00016246001 | |
| 24518 chr1 manual_curation exon 35235663 35235718 . - . Parent=GSCOCT00016246001 | |
| 24519 chr1 manual_curation exon 35235057 35235187 . - . Parent=GSCOCT00016246001 | |
| 24520 chr1 manual_curation exon 35234729 35234864 . - . Parent=GSCOCT00016246001 | |
| 24521 chr1 manual_curation exon 35234516 35234647 . - . Parent=GSCOCT00016246001 | |
| 24522 chr1 manual_curation exon 35233805 35234369 . - . Parent=GSCOCT00016246001 | |
| 24523 chr1 manual_curation CDS 35236127 35236244 . - 0 Parent=GSCOCT00016246001 | |
| 24524 chr1 manual_curation CDS 35235663 35235718 . - 1 Parent=GSCOCT00016246001 | |
| 24525 chr1 manual_curation CDS 35235057 35235187 . - 0 Parent=GSCOCT00016246001 | |
| 24526 chr1 manual_curation CDS 35234729 35234864 . - 2 Parent=GSCOCT00016246001 | |
| 24527 chr1 manual_curation CDS 35234516 35234647 . - 0 Parent=GSCOCT00016246001 | |
| 24528 chr1 manual_curation CDS 35234334 35234369 . - 0 Parent=GSCOCT00016246001 | |
| 24529 chr1 manual_curation gene 35239801 35246593 . - . ID=GSCOCG00016245001;Name=Cc01_g18100 | |
| 24530 chr1 manual_curation mRNA 35239801 35246593 . - . ID=GSCOCT00016245001;Parent=GSCOCG00016245001;Name=Cc01_g18100 | |
| 24531 chr1 manual_curation polypeptide 35240163 35246155 . - . ID=GSCOCP00016245001;Dbxref=InterPro:IPR000195,PFAM:PF00566,PROFILE:PS50086,SMART:SM00164,SUPERFAMILY:SSF47923,SwissProt:Q8TC07,SwissProt:Q9CXF4,SwissProt:Q9UUH7,TAIR:AT2G20440.1,TAIR:AT4G27100.1,TAIR:AT4G28550.1,TrEMBL:B9H8Q5,TrEMBL:F6HZM1,TrEMBL:I1LYM7;Derives_from=GSCOCT00016245001;Name=Cc01_g18100;Ontology_term=CC_evidence_code:ISS,GO:0005097,GO:0005622,GO:0032313,CC_EC_number:missing_EC_number,PRODUCT:Putative GTPase-activating protein gyp7,CC_functional_completeness:fragment,CC_gene:Tbc1d15,CC_gene:TBC1D15,CC_gene:gyp7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016245001~ Putative GTPase-activating protein gyp7~ Tbc1d15~ fragment;original_location=join(2005036..2005128%2C2005561..2005656%2C2006184..2006287%2C2006804..2007021%2C2008086..2008208%2C2008289..2008377%2C2009356..2009461%2C2010161..2010258%2C2010491..2010742%2C2010833..2010916%2C2011014..2011028);owner=coffea | |
| 24532 chr1 manual_curation exon 35246278 35246593 . - . Parent=GSCOCT00016245001 | |
| 24533 chr1 manual_curation exon 35246063 35246169 . - . Parent=GSCOCT00016245001 | |
| 24534 chr1 manual_curation exon 35245535 35245630 . - . Parent=GSCOCT00016245001 | |
| 24535 chr1 manual_curation exon 35244904 35245007 . - . Parent=GSCOCT00016245001 | |
| 24536 chr1 manual_curation exon 35244170 35244387 . - . Parent=GSCOCT00016245001 | |
| 24537 chr1 manual_curation exon 35242983 35243105 . - . Parent=GSCOCT00016245001 | |
| 24538 chr1 manual_curation exon 35242814 35242902 . - . Parent=GSCOCT00016245001 | |
| 24539 chr1 manual_curation exon 35241730 35241835 . - . Parent=GSCOCT00016245001 | |
| 24540 chr1 manual_curation exon 35240933 35241030 . - . Parent=GSCOCT00016245001 | |
| 24541 chr1 manual_curation exon 35240449 35240700 . - . Parent=GSCOCT00016245001 | |
| 24542 chr1 manual_curation exon 35240275 35240358 . - . Parent=GSCOCT00016245001 | |
| 24543 chr1 manual_curation exon 35239801 35240177 . - . Parent=GSCOCT00016245001 | |
| 24544 chr1 manual_curation CDS 35246063 35246155 . - 0 Parent=GSCOCT00016245001 | |
| 24545 chr1 manual_curation CDS 35245535 35245630 . - 0 Parent=GSCOCT00016245001 | |
| 24546 chr1 manual_curation CDS 35244904 35245007 . - 0 Parent=GSCOCT00016245001 | |
| 24547 chr1 manual_curation CDS 35244170 35244387 . - 2 Parent=GSCOCT00016245001 | |
| 24548 chr1 manual_curation CDS 35242983 35243105 . - 1 Parent=GSCOCT00016245001 | |
| 24549 chr1 manual_curation CDS 35242814 35242902 . - 1 Parent=GSCOCT00016245001 | |
| 24550 chr1 manual_curation CDS 35241730 35241835 . - 0 Parent=GSCOCT00016245001 | |
| 24551 chr1 manual_curation CDS 35240933 35241030 . - 1 Parent=GSCOCT00016245001 | |
| 24552 chr1 manual_curation CDS 35240449 35240700 . - 0 Parent=GSCOCT00016245001 | |
| 24553 chr1 manual_curation CDS 35240275 35240358 . - 0 Parent=GSCOCT00016245001 | |
| 24554 chr1 manual_curation CDS 35240163 35240177 . - 0 Parent=GSCOCT00016245001 | |
| 24555 chr1 manual_curation gene 35247063 35249472 . + . ID=GSCOCG00016244001;Name=Cc01_g18110 | |
| 24556 chr1 manual_curation mRNA 35247063 35249472 . + . ID=GSCOCT00016244001;Parent=GSCOCG00016244001;Name=Cc01_g18110 | |
| 24557 chr1 manual_curation polypeptide 35247063 35249012 . + . ID=GSCOCP00016244001;Dbxref=InterPro:IPR002784,PFAM:PF01929,SwissProt:P55844,SwissProt:Q9SIM4,SwissProt:Q9T043,TAIR:AT2G20450.1,TAIR:AT4G27090.1,TrEMBL:D7SZI9,TrEMBL:D7T502;Derives_from=GSCOCT00016244001;Name=Cc01_g18110;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:60S ribosomal protein L14-2,CC_functional_completeness:complete,CC_gene:RPL14B,CC_gene:RPL14A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016244001~ 60S ribosomal protein L14-2~ RPL14B~ complete;original_location=complement(join(2004082..2004128%2C2003864..2003888%2C2003636..2003737%2C2002742..2002871%2C2002546..2002658%2C2002179..2002235));owner=coffea | |
| 24558 chr1 manual_curation exon 35248956 35249472 . + . Parent=GSCOCT00016244001 | |
| 24559 chr1 manual_curation exon 35248533 35248645 . + . Parent=GSCOCT00016244001 | |
| 24560 chr1 manual_curation exon 35248320 35248449 . + . Parent=GSCOCT00016244001 | |
| 24561 chr1 manual_curation exon 35247454 35247555 . + . Parent=GSCOCT00016244001 | |
| 24562 chr1 manual_curation exon 35247303 35247327 . + . Parent=GSCOCT00016244001 | |
| 24563 chr1 manual_curation exon 35247063 35247109 . + . Parent=GSCOCT00016244001 | |
| 24564 chr1 manual_curation CDS 35248956 35249012 . + 0 Parent=GSCOCT00016244001 | |
| 24565 chr1 manual_curation CDS 35248533 35248645 . + 1 Parent=GSCOCT00016244001 | |
| 24566 chr1 manual_curation CDS 35248320 35248449 . + 0 Parent=GSCOCT00016244001 | |
| 24567 chr1 manual_curation CDS 35247454 35247555 . + 0 Parent=GSCOCT00016244001 | |
| 24568 chr1 manual_curation CDS 35247303 35247327 . + 2 Parent=GSCOCT00016244001 | |
| 24569 chr1 manual_curation CDS 35247063 35247109 . + 0 Parent=GSCOCT00016244001 | |
| 24570 chr1 manual_curation gene 35250915 35255824 . + . ID=GSCOCG00016243001;Name=Cc01_g18120 | |
| 24571 chr1 manual_curation mRNA 35250915 35255824 . + . ID=GSCOCT00016243001;Parent=GSCOCG00016243001;Name=Cc01_g18120 | |
| 24572 chr1 manual_curation polypeptide 35251079 35255586 . + . ID=GSCOCP00016243001;Dbxref=InterPro:IPR005024,PFAM:PF03357,SwissProt:Q0WTY4,SwissProt:Q54DB1,SwissProt:Q941D5,TAIR:AT1G03950.1,TAIR:AT2G06530.1,TAIR:AT5G44560.1,TrEMBL:C6SYZ9,TrEMBL:D7U324,TrEMBL:I1N9S5;Derives_from=GSCOCT00016243001;Name=Cc01_g18120;Ontology_term=CC_evidence_code:ISS,GO:0015031,CC_EC_number:missing_EC_number,PRODUCT:Vacuolar protein sorting-associated protein 2 homolog 3,CC_functional_completeness:complete,CC_gene:VPS2.3,CC_gene:VPS2.2,CC_gene:chmp2a2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016243001~ Vacuolar protein sorting-associated protein 2 homolog 3~ VPS2.3~ complete;original_location=complement(join(2000079..2000112%2C1999766..1999810%2C1999162..1999196%2C1999023..1999073%2C1998766..1998870%2C1998605..1998676%2C1998009..1998080%2C1997842..1997922%2C1996424..1996459%2C1996280..1996335%2C1995605..1995656));owner=coffea | |
| 24573 chr1 manual_curation exon 35255535 35255824 . + . Parent=GSCOCT00016243001 | |
| 24574 chr1 manual_curation exon 35254856 35254911 . + . Parent=GSCOCT00016243001 | |
| 24575 chr1 manual_curation exon 35254732 35254767 . + . Parent=GSCOCT00016243001 | |
| 24576 chr1 manual_curation exon 35253269 35253349 . + . Parent=GSCOCT00016243001 | |
| 24577 chr1 manual_curation exon 35253111 35253182 . + . Parent=GSCOCT00016243001 | |
| 24578 chr1 manual_curation exon 35252515 35252586 . + . Parent=GSCOCT00016243001 | |
| 24579 chr1 manual_curation exon 35252321 35252425 . + . Parent=GSCOCT00016243001 | |
| 24580 chr1 manual_curation exon 35252118 35252168 . + . Parent=GSCOCT00016243001 | |
| 24581 chr1 manual_curation exon 35251995 35252029 . + . Parent=GSCOCT00016243001 | |
| 24582 chr1 manual_curation exon 35251381 35251425 . + . Parent=GSCOCT00016243001 | |
| 24583 chr1 manual_curation exon 35250915 35251112 . + . Parent=GSCOCT00016243001 | |
| 24584 chr1 manual_curation CDS 35255535 35255586 . + 2 Parent=GSCOCT00016243001 | |
| 24585 chr1 manual_curation CDS 35254856 35254911 . + 0 Parent=GSCOCT00016243001 | |
| 24586 chr1 manual_curation CDS 35254732 35254767 . + 0 Parent=GSCOCT00016243001 | |
| 24587 chr1 manual_curation CDS 35253269 35253349 . + 0 Parent=GSCOCT00016243001 | |
| 24588 chr1 manual_curation CDS 35253111 35253182 . + 0 Parent=GSCOCT00016243001 | |
| 24589 chr1 manual_curation CDS 35252515 35252586 . + 0 Parent=GSCOCT00016243001 | |
| 24590 chr1 manual_curation CDS 35252321 35252425 . + 0 Parent=GSCOCT00016243001 | |
| 24591 chr1 manual_curation CDS 35252118 35252168 . + 0 Parent=GSCOCT00016243001 | |
| 24592 chr1 manual_curation CDS 35251995 35252029 . + 1 Parent=GSCOCT00016243001 | |
| 24593 chr1 manual_curation CDS 35251381 35251425 . + 1 Parent=GSCOCT00016243001 | |
| 24594 chr1 manual_curation CDS 35251079 35251112 . + 0 Parent=GSCOCT00016243001 | |
| 24595 chr1 manual_curation gene 35257582 35262556 . - . ID=GSCOCG00016242001;Name=Cc01_g18130 | |
| 24596 chr1 manual_curation mRNA 35257582 35262556 . - . ID=GSCOCT00016242001;Parent=GSCOCG00016242001;Name=Cc01_g18130 | |
| 24597 chr1 manual_curation polypeptide 35258063 35262556 . - . ID=GSCOCP00016242001;Dbxref=InterPro:IPR000719,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017442,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00108,SUPERFAMILY:SSF56112,SwissProt:P42158,SwissProt:Q5BP74,SwissProt:Q9JMK2,TAIR:AT3G23340.1,TAIR:AT4G14340.1,TAIR:AT4G28540.1,TrEMBL:B9SS69,TrEMBL:D7SZI3,TrEMBL:F6HZM0;Derives_from=GSCOCT00016242001;Name=Cc01_g18130;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Casein kinase I isoform delta-like,CC_functional_completeness:fragment,CC_gene:At4g26100,CC_gene:csnk1d,CC_gene:Csnk1e;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016242001~ Casein kinase I isoform delta-like~ At4g26100~ fragment;original_location=join(1988635..1988712%2C1989597..1989667%2C1990384..1990445%2C1990540..1990603%2C1990815..1990899%2C1991452..1991578%2C1991742..1991815%2C1991918..1991981%2C1992195..1992325%2C1992862..1993128);owner=coffea | |
| 24598 chr1 manual_curation exon 35262479 35262556 . - . Parent=GSCOCT00016242001 | |
| 24599 chr1 manual_curation exon 35261524 35261594 . - . Parent=GSCOCT00016242001 | |
| 24600 chr1 manual_curation exon 35260746 35260807 . - . Parent=GSCOCT00016242001 | |
| 24601 chr1 manual_curation exon 35260588 35260651 . - . Parent=GSCOCT00016242001 | |
| 24602 chr1 manual_curation exon 35260292 35260376 . - . Parent=GSCOCT00016242001 | |
| 24603 chr1 manual_curation exon 35259613 35259739 . - . Parent=GSCOCT00016242001 | |
| 24604 chr1 manual_curation exon 35259376 35259449 . - . Parent=GSCOCT00016242001 | |
| 24605 chr1 manual_curation exon 35259210 35259273 . - . Parent=GSCOCT00016242001 | |
| 24606 chr1 manual_curation exon 35258866 35258996 . - . Parent=GSCOCT00016242001 | |
| 24607 chr1 manual_curation exon 35257582 35258329 . - . Parent=GSCOCT00016242001 | |
| 24608 chr1 manual_curation CDS 35262479 35262556 . - 0 Parent=GSCOCT00016242001 | |
| 24609 chr1 manual_curation CDS 35261524 35261594 . - 0 Parent=GSCOCT00016242001 | |
| 24610 chr1 manual_curation CDS 35260746 35260807 . - 2 Parent=GSCOCT00016242001 | |
| 24611 chr1 manual_curation CDS 35260588 35260651 . - 1 Parent=GSCOCT00016242001 | |
| 24612 chr1 manual_curation CDS 35260292 35260376 . - 2 Parent=GSCOCT00016242001 | |
| 24613 chr1 manual_curation CDS 35259613 35259739 . - 0 Parent=GSCOCT00016242001 | |
| 24614 chr1 manual_curation CDS 35259376 35259449 . - 1 Parent=GSCOCT00016242001 | |
| 24615 chr1 manual_curation CDS 35259210 35259273 . - 0 Parent=GSCOCT00016242001 | |
| 24616 chr1 manual_curation CDS 35258866 35258996 . - 1 Parent=GSCOCT00016242001 | |
| 24617 chr1 manual_curation CDS 35258063 35258329 . - 0 Parent=GSCOCT00016242001 | |
| 24618 chr1 manual_curation gene 35262631 35265383 . - . ID=GSCOCG00016241001;Name=Cc01_g18140 | |
| 24619 chr1 manual_curation mRNA 35262631 35265383 . - . ID=GSCOCT00016241001;Parent=GSCOCG00016241001;Name=Cc01_g18140 | |
| 24620 chr1 manual_curation polypeptide 35262631 35263999 . - . ID=GSCOCP00016241001;Dbxref=InterPro:IPR000719,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,SUPERFAMILY:SSF56112,SwissProt:P42158,SwissProt:P49674,SwissProt:Q9JMK2,TAIR:AT4G14340.1,TAIR:AT5G44100.1,TrEMBL:B4FLT3,TrEMBL:I1IBP8;Derives_from=GSCOCT00016241001;Name=Cc01_g18140;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0005524,GO:0006468,CC_EC_number:missing_EC_number,PRODUCT:Casein kinase I isoform delta-like,CC_functional_completeness:fragment,CC_gene:At4g26100,CC_gene:Csnk1e,CC_gene:CSNK1E;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016241001~ Casein kinase I isoform delta-like~ At4g26100~ fragment;original_location=join(1987192..1987267%2C1987405..1987445%2C1987813..1987882%2C1988382..1988560);owner=coffea | |
| 24621 chr1 manual_curation exon 35263924 35265383 . - . Parent=GSCOCT00016241001 | |
| 24622 chr1 manual_curation exon 35263746 35263786 . - . Parent=GSCOCT00016241001 | |
| 24623 chr1 manual_curation exon 35263309 35263378 . - . Parent=GSCOCT00016241001 | |
| 24624 chr1 manual_curation exon 35262631 35262809 . - . Parent=GSCOCT00016241001 | |
| 24625 chr1 manual_curation CDS 35263924 35263999 . - 0 Parent=GSCOCT00016241001 | |
| 24626 chr1 manual_curation CDS 35263746 35263786 . - 1 Parent=GSCOCT00016241001 | |
| 24627 chr1 manual_curation CDS 35263309 35263378 . - 0 Parent=GSCOCT00016241001 | |
| 24628 chr1 manual_curation CDS 35262631 35262809 . - 1 Parent=GSCOCT00016241001 | |
| 24629 chr1 manual_curation gene 35269660 35271204 . - . ID=GSCOCG00016240001;Name=Cc01_g18150 | |
| 24630 chr1 manual_curation mRNA 35269660 35271204 . - . ID=GSCOCT00016240001;Parent=GSCOCG00016240001;Name=Cc01_g18150 | |
| 24631 chr1 manual_curation polypeptide 35269660 35271204 . - . ID=GSCOCP00016240001;Dbxref=InterPro:IPR005202,PFAM:PF03514,PROFILE:PS50985,SwissProt:Q2Z2E9,SwissProt:Q9AVK4,SwissProt:Q9M384,TAIR:AT1G63100.1,TAIR:AT3G54220.1,TAIR:AT5G41920.1,TrEMBL:B9GRN9,TrEMBL:B9H8P8,TrEMBL:B9SV25;Derives_from=GSCOCT00016240001;Name=Cc01_g18150;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative GRAS family transcription factor,CC_functional_completeness:modules,CC_gene:SCR;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016240001~ Putative GRAS family transcription factor~ SCR~ modules;original_location=1979987..1981531;owner=coffea | |
| 24632 chr1 manual_curation exon 35269660 35271204 . - . Parent=GSCOCT00016240001 | |
| 24633 chr1 manual_curation CDS 35269660 35271204 . - 0 Parent=GSCOCT00016240001 | |
| 24634 chr1 manual_curation gene 35274554 35282783 . - . ID=GSCOCG00016239001;Name=Cc01_g18160 | |
| 24635 chr1 manual_curation mRNA 35274554 35282783 . - . ID=GSCOCT00016239001;Parent=GSCOCG00016239001;Name=Cc01_g18160 | |
| 24636 chr1 manual_curation polypeptide 35275026 35281741 . - . ID=GSCOCP00016239001;Dbxref=InterPro:IPR000719,InterPro:IPR000961,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR017892,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00433,PROFILE:PS50011,PROFILE:PS51285,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00133,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q2LZZ7,SwissProt:Q6TGC6,SwissProt:Q9Y2H1,TAIR:AT2G20470.1,TAIR:AT3G23310.1,TAIR:AT4G14350.1,TrEMBL:B9H8P7,TrEMBL:B9SV26,TrEMBL:Q9LW99;Derives_from=GSCOCT00016239001;Name=Cc01_g18160;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.11,PRODUCT:Serine/threonine-protein kinase CBK1,CC_functional_completeness:complete,CC_gene:CBK1,CC_gene:STK38L,CC_gene:trc;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016239001~ Serine/threonine-protein kinase CBK1~ CBK1~ complete;original_location=join(1969450..1969673%2C1970287..1970461%2C1971213..1971296%2C1971378..1971619%2C1971722..1971941%2C1972466..1972545%2C1972830..1972914%2C1973836..1973967%2C1974062..1974175%2C1974263..1974310%2C1975095..1975179%2C1975685..1975741%2C1976047..1976165);owner=coffea | |
| 24637 chr1 manual_curation exon 35282366 35282783 . - . Parent=GSCOCT00016239001 | |
| 24638 chr1 manual_curation exon 35281518 35281836 . - . Parent=GSCOCT00016239001 | |
| 24639 chr1 manual_curation exon 35280730 35280904 . - . Parent=GSCOCT00016239001 | |
| 24640 chr1 manual_curation exon 35279895 35279978 . - . Parent=GSCOCT00016239001 | |
| 24641 chr1 manual_curation exon 35279572 35279813 . - . Parent=GSCOCT00016239001 | |
| 24642 chr1 manual_curation exon 35279250 35279469 . - . Parent=GSCOCT00016239001 | |
| 24643 chr1 manual_curation exon 35278646 35278725 . - . Parent=GSCOCT00016239001 | |
| 24644 chr1 manual_curation exon 35278277 35278361 . - . Parent=GSCOCT00016239001 | |
| 24645 chr1 manual_curation exon 35277224 35277355 . - . Parent=GSCOCT00016239001 | |
| 24646 chr1 manual_curation exon 35277016 35277129 . - . Parent=GSCOCT00016239001 | |
| 24647 chr1 manual_curation exon 35276881 35276928 . - . Parent=GSCOCT00016239001 | |
| 24648 chr1 manual_curation exon 35276012 35276096 . - . Parent=GSCOCT00016239001 | |
| 24649 chr1 manual_curation exon 35275450 35275506 . - . Parent=GSCOCT00016239001 | |
| 24650 chr1 manual_curation exon 35274554 35275144 . - . Parent=GSCOCT00016239001 | |
| 24651 chr1 manual_curation CDS 35281518 35281741 . - 0 Parent=GSCOCT00016239001 | |
| 24652 chr1 manual_curation CDS 35280730 35280904 . - 2 Parent=GSCOCT00016239001 | |
| 24653 chr1 manual_curation CDS 35279895 35279978 . - 0 Parent=GSCOCT00016239001 | |
| 24654 chr1 manual_curation CDS 35279572 35279813 . - 0 Parent=GSCOCT00016239001 | |
| 24655 chr1 manual_curation CDS 35279250 35279469 . - 2 Parent=GSCOCT00016239001 | |
| 24656 chr1 manual_curation CDS 35278646 35278725 . - 0 Parent=GSCOCT00016239001 | |
| 24657 chr1 manual_curation CDS 35278277 35278361 . - 2 Parent=GSCOCT00016239001 | |
| 24658 chr1 manual_curation CDS 35277224 35277355 . - 0 Parent=GSCOCT00016239001 | |
| 24659 chr1 manual_curation CDS 35277016 35277129 . - 0 Parent=GSCOCT00016239001 | |
| 24660 chr1 manual_curation CDS 35276881 35276928 . - 0 Parent=GSCOCT00016239001 | |
| 24661 chr1 manual_curation CDS 35276012 35276096 . - 0 Parent=GSCOCT00016239001 | |
| 24662 chr1 manual_curation CDS 35275450 35275506 . - 1 Parent=GSCOCT00016239001 | |
| 24663 chr1 manual_curation CDS 35275026 35275144 . - 1 Parent=GSCOCT00016239001 | |
| 24664 chr1 manual_curation gene 35283983 35287948 . - . ID=GSCOCG00016238001;Name=Cc01_g18170 | |
| 24665 chr1 manual_curation mRNA 35283983 35287948 . - . ID=GSCOCT00016238001;Parent=GSCOCG00016238001;Name=Cc01_g18170 | |
| 24666 chr1 manual_curation polypeptide 35284925 35287747 . - . ID=GSCOCP00016238001;Dbxref=InterPro:IPR003439,InterPro:IPR003593,PFAM:PF00005,PROFILE:PS50893,SMART:SM00382,SwissProt:Q3EDJ0,SwissProt:Q9LZ98,SwissProt:Q9XF19,TAIR:AT1G03905.1,TAIR:AT5G02270.2,TAIR:AT5G44110.1,TrEMBL:D7U321,TrEMBL:F5A834,TrEMBL:I1IDQ8;Derives_from=GSCOCT00016238001;Name=Cc01_g18170;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0016887,GO:0017111,CC_EC_number:3.6.3.41,CC_EC_number:3.6.3.41,PRODUCT:ABC transporter I family member 19,CC_functional_completeness:complete,CC_gene:ABCI19,CC_gene:ABCI21,CC_gene:ABCI20;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016238001~ ABC transporter I family member 19~ ABCI19~ complete;original_location=join(1963444..1963579%2C1963698..1963858%2C1964147..1964198%2C1964475..1964611%2C1965146..1965232%2C1965979..1966266);owner=coffea | |
| 24667 chr1 manual_curation exon 35287612 35287948 . - . Parent=GSCOCT00016238001 | |
| 24668 chr1 manual_curation exon 35287333 35287493 . - . Parent=GSCOCT00016238001 | |
| 24669 chr1 manual_curation exon 35286993 35287044 . - . Parent=GSCOCT00016238001 | |
| 24670 chr1 manual_curation exon 35286580 35286716 . - . Parent=GSCOCT00016238001 | |
| 24671 chr1 manual_curation exon 35285959 35286045 . - . Parent=GSCOCT00016238001 | |
| 24672 chr1 manual_curation exon 35283983 35285212 . - . Parent=GSCOCT00016238001 | |
| 24673 chr1 manual_curation CDS 35287612 35287747 . - 0 Parent=GSCOCT00016238001 | |
| 24674 chr1 manual_curation CDS 35287333 35287493 . - 1 Parent=GSCOCT00016238001 | |
| 24675 chr1 manual_curation CDS 35286993 35287044 . - 0 Parent=GSCOCT00016238001 | |
| 24676 chr1 manual_curation CDS 35286580 35286716 . - 1 Parent=GSCOCT00016238001 | |
| 24677 chr1 manual_curation CDS 35285959 35286045 . - 0 Parent=GSCOCT00016238001 | |
| 24678 chr1 manual_curation CDS 35284925 35285212 . - 0 Parent=GSCOCT00016238001 | |
| 24679 chr1 manual_curation gene 35290049 35296251 . + . ID=GSCOCG00016236001;Name=Cc01_g18180 | |
| 24680 chr1 manual_curation mRNA 35290049 35296251 . + . ID=GSCOCT00016236001;Parent=GSCOCG00016236001;Name=Cc01_g18180 | |
| 24681 chr1 manual_curation polypeptide 35290262 35295912 . + . ID=GSCOCP00016236001;Dbxref=InterPro:IPR000330,InterPro:IPR001650,InterPro:IPR014001,InterPro:IPR014021,PFAM:PF00176,PFAM:PF00271,PROFILE:PS51192,PROFILE:PS51194,SMART:SM00487,SMART:SM00490,SwissProt:P40352,SwissProt:Q03468,SwissProt:Q9UR24,TAIR:AT2G18760.1,TAIR:AT5G19310.1,TAIR:AT5G63950.1,TrEMBL:A5BDX2,TrEMBL:B9SV29,TrEMBL:F6HZL7;Derives_from=GSCOCT00016236001;Name=Cc01_g18180;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0003677,GO:0004386,GO:0005524,CC_EC_number:missing_EC_number,PRODUCT:Putative DNA repair protein rhp26,CC_functional_completeness:modules,CC_gene:RAD26,CC_gene:rhp26,CC_gene:ERCC6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016236001~ Putative DNA repair protein rhp26~ RAD26~ modules;original_location=complement(join(1960837..1960929%2C1960165..1960713%2C1959524..1959929%2C1958830..1959163%2C1958311..1958745%2C1957232..1957841%2C1956475..1956924%2C1955279..1955956));owner=coffea | |
| 24682 chr1 manual_curation exon 35295235 35296251 . + . Parent=GSCOCT00016236001 | |
| 24683 chr1 manual_curation exon 35294267 35294716 . + . Parent=GSCOCT00016236001 | |
| 24684 chr1 manual_curation exon 35293350 35293959 . + . Parent=GSCOCT00016236001 | |
| 24685 chr1 manual_curation exon 35292446 35292880 . + . Parent=GSCOCT00016236001 | |
| 24686 chr1 manual_curation exon 35292028 35292361 . + . Parent=GSCOCT00016236001 | |
| 24687 chr1 manual_curation exon 35291262 35291667 . + . Parent=GSCOCT00016236001 | |
| 24688 chr1 manual_curation exon 35290478 35291026 . + . Parent=GSCOCT00016236001 | |
| 24689 chr1 manual_curation exon 35290049 35290354 . + . Parent=GSCOCT00016236001 | |
| 24690 chr1 manual_curation CDS 35295235 35295912 . + 0 Parent=GSCOCT00016236001 | |
| 24691 chr1 manual_curation CDS 35294267 35294716 . + 0 Parent=GSCOCT00016236001 | |
| 24692 chr1 manual_curation CDS 35293350 35293959 . + 2 Parent=GSCOCT00016236001 | |
| 24693 chr1 manual_curation CDS 35292446 35292880 . + 2 Parent=GSCOCT00016236001 | |
| 24694 chr1 manual_curation CDS 35292028 35292361 . + 1 Parent=GSCOCT00016236001 | |
| 24695 chr1 manual_curation CDS 35291262 35291667 . + 0 Parent=GSCOCT00016236001 | |
| 24696 chr1 manual_curation CDS 35290478 35291026 . + 0 Parent=GSCOCT00016236001 | |
| 24697 chr1 manual_curation CDS 35290262 35290354 . + 0 Parent=GSCOCT00016236001 | |
| 24698 chr1 manual_curation gene 35298865 35301976 . - . ID=GSCOCG00016235001;Name=Cc01_g18190 | |
| 24699 chr1 manual_curation mRNA 35298865 35301976 . - . ID=GSCOCT00016235001;Parent=GSCOCG00016235001;Name=Cc01_g18190 | |
| 24700 chr1 manual_curation polypeptide 35299001 35301713 . - . ID=GSCOCP00016235001;Dbxref=InterPro:IPR012466,PFAM:PF07933,SwissProt:Q681Q7,SwissProt:Q6P756,SwissProt:Q9NVZ3,TAIR:AT1G03900.1,TAIR:AT3G58600.1,TrEMBL:B9SV30,TrEMBL:F2DAT5,TrEMBL:I1I4N4;Derives_from=GSCOCT00016235001;Name=Cc01_g18190;Ontology_term=CC_evidence_code:ISS,GO:0006897,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterized protein At1g03900,CC_functional_completeness:complete,CC_gene:At1g03900,CC_gene:Necap2,CC_gene:NECAP2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016235001~ Uncharacterized protein At1g03900~ At1g03900~ complete;original_location=join(1949478..1949975%2C1950754..1951041%2C1952122..1952190);owner=coffea | |
| 24701 chr1 manual_curation exon 35301216 35301976 . - . Parent=GSCOCT00016235001 | |
| 24702 chr1 manual_curation exon 35300150 35300437 . - . Parent=GSCOCT00016235001 | |
| 24703 chr1 manual_curation exon 35298865 35299069 . - . Parent=GSCOCT00016235001 | |
| 24704 chr1 manual_curation CDS 35301216 35301713 . - 0 Parent=GSCOCT00016235001 | |
| 24705 chr1 manual_curation CDS 35300150 35300437 . - 0 Parent=GSCOCT00016235001 | |
| 24706 chr1 manual_curation CDS 35299001 35299069 . - 0 Parent=GSCOCT00016235001 | |
| 24707 chr1 manual_curation gene 35303813 35311963 . + . ID=GSCOCG00016234001;Name=Cc01_g18200 | |
| 24708 chr1 manual_curation mRNA 35303813 35311963 . + . ID=GSCOCT00016234001;Parent=GSCOCG00016234001;Name=Cc01_g18200 | |
| 24709 chr1 manual_curation polypeptide 35304056 35311618 . + . ID=GSCOCP00016234001;Dbxref=InterPro:IPR008814,PANTHER:PTHR12640,PFAM:PF05817,SwissProt:P04844,SwissProt:P25235,SwissProt:Q5RBM1,TAIR:AT4G21150.1,TrEMBL:B9GRP4,TrEMBL:D7U318,TrEMBL:I1JP48;Derives_from=GSCOCT00016234001;Name=Cc01_g18200;Ontology_term=CC_evidence_code:ISS,GO:0004579,GO:0005789,GO:0008250,GO:0018279,CC_EC_number:missing_EC_number,PRODUCT:ribophorin II (RPN2) family protein,CC_functional_completeness:complete,CC_gene:RPN2,CC_gene:Rpn2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016234001~ ribophorin II (RPN2) family protein~ RPN2~ complete;original_location=complement(join(1946996..1947135%2C1946471..1946663%2C1946280..1946369%2C1946073..1946135%2C1945878..1945947%2C1945486..1945550%2C1945066..1945120%2C1944220..1944347%2C1944018..1944139%2C1943817..1943886%2C1943343..1943444%2C1943153..1943242%2C1942892..1943040%2C1942129..1942240%2C1941969..1942052%2C1941629..1941709%2C1941305..1941529%2C1940790..1940912%2C1939573..1939689));owner=coffea | |
| 24710 chr1 manual_curation exon 35303813 35303944 . + . Parent=GSCOCT00016234001 | |
| 24711 chr1 manual_curation exon 35311502 35311963 . + . Parent=GSCOCT00016234001 | |
| 24712 chr1 manual_curation exon 35310279 35310401 . + . Parent=GSCOCT00016234001 | |
| 24713 chr1 manual_curation exon 35309662 35309886 . + . Parent=GSCOCT00016234001 | |
| 24714 chr1 manual_curation exon 35309482 35309562 . + . Parent=GSCOCT00016234001 | |
| 24715 chr1 manual_curation exon 35309139 35309222 . + . Parent=GSCOCT00016234001 | |
| 24716 chr1 manual_curation exon 35308951 35309062 . + . Parent=GSCOCT00016234001 | |
| 24717 chr1 manual_curation exon 35308151 35308299 . + . Parent=GSCOCT00016234001 | |
| 24718 chr1 manual_curation exon 35307949 35308038 . + . Parent=GSCOCT00016234001 | |
| 24719 chr1 manual_curation exon 35307747 35307848 . + . Parent=GSCOCT00016234001 | |
| 24720 chr1 manual_curation exon 35307305 35307374 . + . Parent=GSCOCT00016234001 | |
| 24721 chr1 manual_curation exon 35307052 35307173 . + . Parent=GSCOCT00016234001 | |
| 24722 chr1 manual_curation exon 35306844 35306971 . + . Parent=GSCOCT00016234001 | |
| 24723 chr1 manual_curation exon 35306071 35306125 . + . Parent=GSCOCT00016234001 | |
| 24724 chr1 manual_curation exon 35305641 35305705 . + . Parent=GSCOCT00016234001 | |
| 24725 chr1 manual_curation exon 35305244 35305313 . + . Parent=GSCOCT00016234001 | |
| 24726 chr1 manual_curation exon 35305056 35305118 . + . Parent=GSCOCT00016234001 | |
| 24727 chr1 manual_curation exon 35304822 35304911 . + . Parent=GSCOCT00016234001 | |
| 24728 chr1 manual_curation exon 35304528 35304720 . + . Parent=GSCOCT00016234001 | |
| 24729 chr1 manual_curation exon 35304054 35304195 . + . Parent=GSCOCT00016234001 | |
| 24730 chr1 manual_curation CDS 35311502 35311618 . + 0 Parent=GSCOCT00016234001 | |
| 24731 chr1 manual_curation CDS 35310279 35310401 . + 0 Parent=GSCOCT00016234001 | |
| 24732 chr1 manual_curation CDS 35309662 35309886 . + 0 Parent=GSCOCT00016234001 | |
| 24733 chr1 manual_curation CDS 35309482 35309562 . + 0 Parent=GSCOCT00016234001 | |
| 24734 chr1 manual_curation CDS 35309139 35309222 . + 0 Parent=GSCOCT00016234001 | |
| 24735 chr1 manual_curation CDS 35308951 35309062 . + 2 Parent=GSCOCT00016234001 | |
| 24736 chr1 manual_curation CDS 35308151 35308299 . + 0 Parent=GSCOCT00016234001 | |
| 24737 chr1 manual_curation CDS 35307949 35308038 . + 0 Parent=GSCOCT00016234001 | |
| 24738 chr1 manual_curation CDS 35307747 35307848 . + 0 Parent=GSCOCT00016234001 | |
| 24739 chr1 manual_curation CDS 35307305 35307374 . + 2 Parent=GSCOCT00016234001 | |
| 24740 chr1 manual_curation CDS 35307052 35307173 . + 0 Parent=GSCOCT00016234001 | |
| 24741 chr1 manual_curation CDS 35306844 35306971 . + 1 Parent=GSCOCT00016234001 | |
| 24742 chr1 manual_curation CDS 35306071 35306125 . + 0 Parent=GSCOCT00016234001 | |
| 24743 chr1 manual_curation CDS 35305641 35305705 . + 1 Parent=GSCOCT00016234001 | |
| 24744 chr1 manual_curation CDS 35305244 35305313 . + 0 Parent=GSCOCT00016234001 | |
| 24745 chr1 manual_curation CDS 35305056 35305118 . + 0 Parent=GSCOCT00016234001 | |
| 24746 chr1 manual_curation CDS 35304822 35304911 . + 0 Parent=GSCOCT00016234001 | |
| 24747 chr1 manual_curation CDS 35304528 35304720 . + 2 Parent=GSCOCT00016234001 | |
| 24748 chr1 manual_curation CDS 35304056 35304195 . + 0 Parent=GSCOCT00016234001 | |
| 24749 chr1 manual_curation gene 35314549 35318857 . + . ID=GSCOCG00016233001;Name=Cc01_g18210 | |
| 24750 chr1 manual_curation mRNA 35314549 35318857 . + . ID=GSCOCT00016233001;Parent=GSCOCG00016233001;Name=Cc01_g18210 | |
| 24751 chr1 manual_curation polypeptide 35314684 35317962 . + . ID=GSCOCP00016233001;Dbxref=InterPro:IPR018865,PFAM:PF10494,SwissProt:P49842,SwissProt:Q54WC0,SwissProt:Q9JHN8,TAIR:AT2G20495.1,TrEMBL:B9SV33,TrEMBL:D7U316,TrEMBL:I1LYL7;Derives_from=GSCOCT00016233001;Name=Cc01_g18210;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Serine/threonine-protein kinase 19,CC_functional_completeness:fragment,CC_gene:STK19,CC_gene:Stk19;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016233001~ Putative Serine/threonine-protein kinase 19~ STK19~ fragment;original_location=complement(join(1936408..1936507%2C1936185..1936258%2C1935935..1936015%2C1935739..1935831%2C1935277..1935396%2C1934734..1934805%2C1934151..1934228%2C1933229..1933420));owner=coffea | |
| 24752 chr1 manual_curation exon 35318696 35318857 . + . Parent=GSCOCT00016233001 | |
| 24753 chr1 manual_curation exon 35317771 35317968 . + . Parent=GSCOCT00016233001 | |
| 24754 chr1 manual_curation exon 35316963 35317040 . + . Parent=GSCOCT00016233001 | |
| 24755 chr1 manual_curation exon 35316386 35316457 . + . Parent=GSCOCT00016233001 | |
| 24756 chr1 manual_curation exon 35315795 35315914 . + . Parent=GSCOCT00016233001 | |
| 24757 chr1 manual_curation exon 35315360 35315452 . + . Parent=GSCOCT00016233001 | |
| 24758 chr1 manual_curation exon 35315176 35315256 . + . Parent=GSCOCT00016233001 | |
| 24759 chr1 manual_curation exon 35314933 35315006 . + . Parent=GSCOCT00016233001 | |
| 24760 chr1 manual_curation exon 35314549 35314783 . + . Parent=GSCOCT00016233001 | |
| 24761 chr1 manual_curation CDS 35317771 35317962 . + 0 Parent=GSCOCT00016233001 | |
| 24762 chr1 manual_curation CDS 35316963 35317040 . + 0 Parent=GSCOCT00016233001 | |
| 24763 chr1 manual_curation CDS 35316386 35316457 . + 0 Parent=GSCOCT00016233001 | |
| 24764 chr1 manual_curation CDS 35315795 35315914 . + 0 Parent=GSCOCT00016233001 | |
| 24765 chr1 manual_curation CDS 35315360 35315452 . + 0 Parent=GSCOCT00016233001 | |
| 24766 chr1 manual_curation CDS 35315176 35315256 . + 0 Parent=GSCOCT00016233001 | |
| 24767 chr1 manual_curation CDS 35314933 35315006 . + 1 Parent=GSCOCT00016233001 | |
| 24768 chr1 manual_curation CDS 35314684 35314783 . + 0 Parent=GSCOCT00016233001 | |
| 24769 chr1 manual_curation gene 35343610 35347745 . + . ID=GSCOCG00016231001;Name=Cc01_g18220 | |
| 24770 chr1 manual_curation mRNA 35343610 35347745 . + . ID=GSCOCT00016231001;Parent=GSCOCG00016231001;Name=Cc01_g18220 | |
| 24771 chr1 manual_curation polypeptide 35343860 35347416 . + . ID=GSCOCP00016231001;Dbxref=InterPro:IPR003441,PFAM:PF02365,PROFILE:PS51005,SUPERFAMILY:SSF101941,SwissProt:O04017,SwissProt:Q84TE6,SwissProt:Q9S851,TAIR:AT1G56010.2,TAIR:AT1G76420.1,TAIR:AT4G28530.1,TrEMBL:B9GRP6,TrEMBL:B9H8N9,TrEMBL:I1L8E7;Derives_from=GSCOCT00016231001;Name=Cc01_g18220;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:NAC domain protein%2C IPR003441,CC_functional_completeness:complete,CC_gene:NAC021,CC_gene:NAC031,CC_gene:NAC098;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016231001~ NAC domain protein%2C IPR003441~ NAC021~ complete;original_location=complement(join(1907163..1907331%2C1905106..1905371%2C1903775..1904239));owner=coffea | |
| 24772 chr1 manual_curation exon 35346952 35347745 . + . Parent=GSCOCT00016231001 | |
| 24773 chr1 manual_curation exon 35345820 35346085 . + . Parent=GSCOCT00016231001 | |
| 24774 chr1 manual_curation exon 35343610 35344028 . + . Parent=GSCOCT00016231001 | |
| 24775 chr1 manual_curation CDS 35346952 35347416 . + 0 Parent=GSCOCT00016231001 | |
| 24776 chr1 manual_curation CDS 35345820 35346085 . + 1 Parent=GSCOCT00016231001 | |
| 24777 chr1 manual_curation CDS 35343860 35344028 . + 0 Parent=GSCOCT00016231001 | |
| 24778 chr1 manual_curation gene 35349819 35359188 . + . ID=GSCOCG00016230001;Name=Cc01_g18230 | |
| 24779 chr1 manual_curation mRNA 35349819 35359188 . + . ID=GSCOCT00016230001;Parent=GSCOCG00016230001;Name=Cc01_g18230 | |
| 24780 chr1 manual_curation polypeptide 35352180 35358794 . + . ID=GSCOCP00016230001;Dbxref=InterPro:IPR003347,InterPro:IPR003349,InterPro:IPR004198,InterPro:IPR013129,PFAM:PF02373,PFAM:PF02375,PFAM:PF02928,PROFILE:PS51183,PROFILE:PS51184,SMART:SM00545,SMART:SM00558,SwissProt:P29375,SwissProt:Q3UXZ9,SwissProt:Q8GUI6,TAIR:AT1G08620.1,TAIR:AT1G30810.1,TAIR:AT4G20400.1,TrEMBL:B9T1C1,TrEMBL:F6H616,TrEMBL:F6HZL4;Derives_from=GSCOCT00016230001;Name=Cc01_g18230;Ontology_term=CC_evidence_code:ISS,GO:0005634,CC_EC_number:missing_EC_number,PRODUCT:Putative Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein,CC_functional_completeness:fragment,CC_gene:JMJ14,CC_gene:KDM5A,CC_gene:Kdm5a;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016230001~ Putative Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein~ JMJ14~ fragment;original_location=complement(join(1898724..1899011%2C1896672..1896743%2C1896449..1896526%2C1895835..1896359%2C1895517..1895741%2C1895112..1895270%2C1893868..1894215%2C1892397..1893023));owner=coffea | |
| 24781 chr1 manual_curation exon 35349819 35349967 . + . Parent=GSCOCT00016230001 | |
| 24782 chr1 manual_curation exon 35358168 35359188 . + . Parent=GSCOCT00016230001 | |
| 24783 chr1 manual_curation exon 35356976 35357323 . + . Parent=GSCOCT00016230001 | |
| 24784 chr1 manual_curation exon 35355921 35356079 . + . Parent=GSCOCT00016230001 | |
| 24785 chr1 manual_curation exon 35355450 35355674 . + . Parent=GSCOCT00016230001 | |
| 24786 chr1 manual_curation exon 35354832 35355356 . + . Parent=GSCOCT00016230001 | |
| 24787 chr1 manual_curation exon 35354665 35354742 . + . Parent=GSCOCT00016230001 | |
| 24788 chr1 manual_curation exon 35354448 35354519 . + . Parent=GSCOCT00016230001 | |
| 24789 chr1 manual_curation exon 35352144 35352467 . + . Parent=GSCOCT00016230001 | |
| 24790 chr1 manual_curation CDS 35358168 35358794 . + 0 Parent=GSCOCT00016230001 | |
| 24791 chr1 manual_curation CDS 35356976 35357323 . + 0 Parent=GSCOCT00016230001 | |
| 24792 chr1 manual_curation CDS 35355921 35356079 . + 0 Parent=GSCOCT00016230001 | |
| 24793 chr1 manual_curation CDS 35355450 35355674 . + 0 Parent=GSCOCT00016230001 | |
| 24794 chr1 manual_curation CDS 35354832 35355356 . + 0 Parent=GSCOCT00016230001 | |
| 24795 chr1 manual_curation CDS 35354665 35354742 . + 0 Parent=GSCOCT00016230001 | |
| 24796 chr1 manual_curation CDS 35354448 35354519 . + 0 Parent=GSCOCT00016230001 | |
| 24797 chr1 manual_curation CDS 35352180 35352467 . + 0 Parent=GSCOCT00016230001 | |
| 24798 chr1 manual_curation gene 35368621 35369841 . - . ID=GSCOCG00016228001;Name=Cc01_g18240 | |
| 24799 chr1 manual_curation mRNA 35368621 35369841 . - . ID=GSCOCT00016228001;Parent=GSCOCG00016228001;Name=Cc01_g18240 | |
| 24800 chr1 manual_curation polypeptide 35369254 35369841 . - . ID=GSCOCP00016228001;Dbxref=InterPro:IPR006936,PFAM:PF04852,TAIR:AT1G07090.1,TAIR:AT2G31160.1,TAIR:AT5G58500.1,TrEMBL:A9PEU5,TrEMBL:B9H8N7,TrEMBL:D1MYE3;Derives_from=GSCOCT00016228001;Name=Cc01_g18240;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF640),CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016228001~ Protein of unknown function (DUF640)~ unknown_gene~ fragment;original_location=1881350..1881937;owner=coffea | |
| 24801 chr1 manual_curation exon 35368621 35369841 . - . Parent=GSCOCT00016228001 | |
| 24802 chr1 manual_curation CDS 35369254 35369841 . - 0 Parent=GSCOCT00016228001 | |
| 24803 chr1 manual_curation gene 35377538 35383103 . - . ID=GSCOCG00016227001;Name=Cc01_g18250 | |
| 24804 chr1 manual_curation mRNA 35377538 35383103 . - . ID=GSCOCT00016227001;Parent=GSCOCG00016227001;Name=Cc01_g18250 | |
| 24805 chr1 manual_curation polypeptide 35377877 35381863 . - . ID=GSCOCP00016227001;Dbxref=GENE3D:G3DSA:1.25.10.10,InterPro:IPR000225,InterPro:IPR003613,InterPro:IPR011989,InterPro:IPR016024,PFAM:PF00514,PFAM:PF04564,PROFILE:PS50176,SMART:SM00185,SMART:SM00504,SUPERFAMILY:SSF48371,SwissProt:O22193,SwissProt:Q5XEZ8,SwissProt:Q8GWV5,TAIR:AT2G23140.1,TAIR:AT3G54790.1,TAIR:AT5G67340.1,TrEMBL:B9GS07,TrEMBL:B9H8N4,TrEMBL:F6HZL0;Derives_from=GSCOCT00016227001;Name=Cc01_g18250;Ontology_term=CC_evidence_code:ISS,GO:0000151,GO:0004842,GO:0005488,GO:0016567,CC_EC_number:missing_EC_number,PRODUCT:U-box domain-containing protein 3,CC_functional_completeness:complete,CC_gene:PUB3,CC_gene:PUB2,CC_gene:PUB4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016227001~ U-box domain-containing protein 3~ PUB3~ complete;original_location=join(1869328..1869603%2C1870401..1870517%2C1870733..1872583%2C1873249..1873314);owner=coffea | |
| 24806 chr1 manual_curation exon 35382938 35383103 . - . Parent=GSCOCT00016227001 | |
| 24807 chr1 manual_curation exon 35381588 35381867 . - . Parent=GSCOCT00016227001 | |
| 24808 chr1 manual_curation exon 35380674 35380790 . - . Parent=GSCOCT00016227001 | |
| 24809 chr1 manual_curation exon 35378608 35380458 . - . Parent=GSCOCT00016227001 | |
| 24810 chr1 manual_curation exon 35377538 35377942 . - . Parent=GSCOCT00016227001 | |
| 24811 chr1 manual_curation CDS 35381588 35381863 . - 0 Parent=GSCOCT00016227001 | |
| 24812 chr1 manual_curation CDS 35380674 35380790 . - 0 Parent=GSCOCT00016227001 | |
| 24813 chr1 manual_curation CDS 35378608 35380458 . - 0 Parent=GSCOCT00016227001 | |
| 24814 chr1 manual_curation CDS 35377877 35377942 . - 0 Parent=GSCOCT00016227001 | |
| 24815 chr1 manual_curation gene 35384755 35387882 . - . ID=GSCOCG00016225001;Name=Cc01_g18260 | |
| 24816 chr1 manual_curation mRNA 35384755 35387882 . - . ID=GSCOCT00016225001;Parent=GSCOCG00016225001;Name=Cc01_g18260 | |
| 24817 chr1 manual_curation polypeptide 35384997 35387631 . - . ID=GSCOCP00016225001;Dbxref=InterPro:IPR001757,InterPro:IPR011112,PANTHER:PTHR11939,PFAM:PF07498,SwissProt:Q8L4E7,TAIR:AT1G06190.1,TAIR:AT2G31150.1,TrEMBL:B9GS08,TrEMBL:B9T1B2,TrEMBL:F6HZK9;Derives_from=GSCOCT00016225001;Name=Cc01_g18260;Ontology_term=CC_evidence_code:ISS,GO:0003715,GO:0005524,GO:0006353,GO:0006754,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative SAP-like protein BP-73,CC_functional_completeness:complete,CC_gene:BP-73;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016225001~ Putative SAP-like protein BP-73~ BP-73~ complete;original_location=join(1863560..1863599%2C1865116..1866194);owner=coffea | |
| 24818 chr1 manual_curation exon 35387592 35387882 . - . Parent=GSCOCT00016225001 | |
| 24819 chr1 manual_curation exon 35384755 35386075 . - . Parent=GSCOCT00016225001 | |
| 24820 chr1 manual_curation CDS 35387592 35387631 . - 0 Parent=GSCOCT00016225001 | |
| 24821 chr1 manual_curation CDS 35384997 35386075 . - 1 Parent=GSCOCT00016225001 | |
| 24822 chr1 manual_curation gene 35389046 35393443 . - . ID=GSCOCG00016224001;Name=Cc01_g18270 | |
| 24823 chr1 manual_curation mRNA 35389046 35393443 . - . ID=GSCOCT00016224001;Parent=GSCOCG00016224001;Name=Cc01_g18270 | |
| 24824 chr1 manual_curation polypeptide 35389763 35393252 . - . ID=GSCOCP00016224001;Dbxref=GENE3D:G3DSA:2.10.109.10,InterPro:IPR011056,InterPro:IPR015927,SUPERFAMILY:SSF51306,TAIR:AT1G06200.1,TAIR:AT2G31140.1,TrEMBL:B9GS09,TrEMBL:B9H8N0,TrEMBL:F6HZK8;Derives_from=GSCOCT00016224001;Name=Cc01_g18270;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Peptidase S24/S26A/S26B/S26C family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016224001~ Peptidase S24/S26A/S26B/S26C family protein~ unknown_gene~ complete;original_location=join(1857939..1858010%2C1859567..1859724%2C1860096..1860279%2C1861129..1861235%2C1861347..1861428);owner=coffea | |
| 24825 chr1 manual_curation exon 35393181 35393443 . - . Parent=GSCOCT00016224001 | |
| 24826 chr1 manual_curation exon 35391467 35391624 . - . Parent=GSCOCT00016224001 | |
| 24827 chr1 manual_curation exon 35390912 35391095 . - . Parent=GSCOCT00016224001 | |
| 24828 chr1 manual_curation exon 35389956 35390062 . - . Parent=GSCOCT00016224001 | |
| 24829 chr1 manual_curation exon 35389046 35389844 . - . Parent=GSCOCT00016224001 | |
| 24830 chr1 manual_curation CDS 35393181 35393252 . - 0 Parent=GSCOCT00016224001 | |
| 24831 chr1 manual_curation CDS 35391467 35391624 . - 0 Parent=GSCOCT00016224001 | |
| 24832 chr1 manual_curation CDS 35390912 35391095 . - 2 Parent=GSCOCT00016224001 | |
| 24833 chr1 manual_curation CDS 35389956 35390062 . - 0 Parent=GSCOCT00016224001 | |
| 24834 chr1 manual_curation CDS 35389763 35389844 . - 2 Parent=GSCOCT00016224001 | |
| 24835 chr1 manual_curation gene 35396767 35400976 . + . ID=GSCOCG00016223001;Name=Cc01_g18280 | |
| 24836 chr1 manual_curation mRNA 35396767 35400976 . + . ID=GSCOCT00016223001;Parent=GSCOCG00016223001;Name=Cc01_g18280 | |
| 24837 chr1 manual_curation polypeptide 35396952 35400643 . + . ID=GSCOCP00016223001;Dbxref=GENE3D:G3DSA:1.25.40.90,InterPro:IPR002014,InterPro:IPR004152,InterPro:IPR008942,InterPro:IPR018205,PFAM:PF00790,PFAM:PF03127,PROFILE:PS50179,PROFILE:PS50909,SMART:SM00288,SUPERFAMILY:SSF48464,SwissProt:Q5SRX1,SwissProt:Q68FJ8,TAIR:AT1G06210.1,TAIR:AT4G32760.2,TAIR:AT5G16880.1,TrEMBL:B9GS10,TrEMBL:F6HZK7,TrEMBL:I1N9R3;Derives_from=GSCOCT00016223001;Name=Cc01_g18280;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0006886,CC_EC_number:missing_EC_number,PRODUCT:ENTH/VHS/GAT family protein,CC_functional_completeness:complete,CC_gene:Tom1l2,CC_gene:tom1l2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016223001~ ENTH/VHS/GAT family protein~ Tom1l2~ complete;original_location=complement(join(1853739..1854239%2C1851136..1851411%2C1850548..1850937));owner=coffea | |
| 24838 chr1 manual_curation exon 35400254 35400976 . + . Parent=GSCOCT00016223001 | |
| 24839 chr1 manual_curation exon 35399780 35400055 . + . Parent=GSCOCT00016223001 | |
| 24840 chr1 manual_curation exon 35396767 35397452 . + . Parent=GSCOCT00016223001 | |
| 24841 chr1 manual_curation CDS 35400254 35400643 . + 0 Parent=GSCOCT00016223001 | |
| 24842 chr1 manual_curation CDS 35399780 35400055 . + 0 Parent=GSCOCT00016223001 | |
| 24843 chr1 manual_curation CDS 35396952 35397452 . + 0 Parent=GSCOCT00016223001 | |
| 24844 chr1 manual_curation gene 35401760 35406784 . + . ID=GSCOCG00016222001;Name=Cc01_g18290 | |
| 24845 chr1 manual_curation mRNA 35401760 35406784 . + . ID=GSCOCT00016222001;Parent=GSCOCG00016222001;Name=Cc01_g18290 | |
| 24846 chr1 manual_curation polypeptide 35402050 35406784 . + . ID=GSCOCP00016222001;Dbxref=InterPro:IPR003395,InterPro:IPR009053,InterPro:IPR010935,PFAM:PF02463,PFAM:PF06470,SUPERFAMILY:SSF46579,SUPERFAMILY:SSF75553,SwissProt:O97593,SwissProt:Q9CU62,SwissProt:Q9Z1M9,TAIR:AT3G47460.1,TAIR:AT3G54670.3,TAIR:AT5G48600.2,TrEMBL:B9H8M7,TrEMBL:B9T1A8,TrEMBL:I1LYK3;Derives_from=GSCOCT00016222001;Name=Cc01_g18290;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0005524,GO:0005694,GO:0051276,CC_EC_number:missing_EC_number,PRODUCT:Putative Structural maintenance of chromosomes protein 1A,CC_functional_completeness:fragment,CC_gene:Smc1a,CC_gene:SMC1A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016222001~ Putative Structural maintenance of chromosomes protein 1A~ Smc1a~ fragment;original_location=complement(join(1848701..1849141%2C1847891..1848127%2C1846887..1847120%2C1846251..1846489%2C1845740..1846006%2C1845302..1845572%2C1844407..1844565));owner=coffea | |
| 24847 chr1 manual_curation exon 35406626 35406784 . + . Parent=GSCOCT00016222001 | |
| 24848 chr1 manual_curation exon 35405619 35405889 . + . Parent=GSCOCT00016222001 | |
| 24849 chr1 manual_curation exon 35405185 35405451 . + . Parent=GSCOCT00016222001 | |
| 24850 chr1 manual_curation exon 35404702 35404940 . + . Parent=GSCOCT00016222001 | |
| 24851 chr1 manual_curation exon 35404071 35404304 . + . Parent=GSCOCT00016222001 | |
| 24852 chr1 manual_curation exon 35403064 35403300 . + . Parent=GSCOCT00016222001 | |
| 24853 chr1 manual_curation exon 35401760 35402490 . + . Parent=GSCOCT00016222001 | |
| 24854 chr1 manual_curation CDS 35406626 35406784 . + 0 Parent=GSCOCT00016222001 | |
| 24855 chr1 manual_curation CDS 35405619 35405889 . + 2 Parent=GSCOCT00016222001 | |
| 24856 chr1 manual_curation CDS 35405185 35405451 . + 2 Parent=GSCOCT00016222001 | |
| 24857 chr1 manual_curation CDS 35404702 35404940 . + 0 Parent=GSCOCT00016222001 | |
| 24858 chr1 manual_curation CDS 35404071 35404304 . + 0 Parent=GSCOCT00016222001 | |
| 24859 chr1 manual_curation CDS 35403064 35403300 . + 0 Parent=GSCOCT00016222001 | |
| 24860 chr1 manual_curation CDS 35402050 35402490 . + 0 Parent=GSCOCT00016222001 | |
| 24861 chr1 manual_curation gene 35407056 35412425 . + . ID=GSCOCG00016221001;Name=Cc01_g18300 | |
| 24862 chr1 manual_curation mRNA 35407056 35412425 . + . ID=GSCOCT00016221001;Parent=GSCOCG00016221001;Name=Cc01_g18300 | |
| 24863 chr1 manual_curation polypeptide 35407056 35412082 . + . ID=GSCOCP00016221001;Dbxref=InterPro:IPR003395,InterPro:IPR010935,PFAM:PF02463,SUPERFAMILY:SSF75553,SwissProt:O93308,SwissProt:O97593,SwissProt:Q9CU62,TAIR:AT3G47460.1,TAIR:AT3G54670.3,TAIR:AT5G48600.2,TrEMBL:F6HZK4,TrEMBL:I1L8E2,TrEMBL:I1LYK3;Derives_from=GSCOCT00016221001;Name=Cc01_g18300;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0005524,GO:0005694,GO:0051276,CC_EC_number:missing_EC_number,PRODUCT:Putative Structural maintenance of chromosomes protein 1A,CC_functional_completeness:fragment,CC_gene:smc1a,CC_gene:SMC1A,CC_gene:Smc1a;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016221001~ Putative Structural maintenance of chromosomes protein 1A~ smc1a~ fragment;original_location=complement(join(1844017..1844135%2C1843800..1843942%2C1843618..1843725%2C1843396..1843535%2C1842912..1843001%2C1842623..1842831%2C1841943..1842118%2C1841701..1841810%2C1841164..1841543%2C1839885..1840136%2C1839255..1839482%2C1839109..1839157));owner=coffea | |
| 24864 chr1 manual_curation exon 35412034 35412425 . + . Parent=GSCOCT00016221001 | |
| 24865 chr1 manual_curation exon 35411709 35411936 . + . Parent=GSCOCT00016221001 | |
| 24866 chr1 manual_curation exon 35411055 35411306 . + . Parent=GSCOCT00016221001 | |
| 24867 chr1 manual_curation exon 35409648 35410027 . + . Parent=GSCOCT00016221001 | |
| 24868 chr1 manual_curation exon 35409381 35409490 . + . Parent=GSCOCT00016221001 | |
| 24869 chr1 manual_curation exon 35409073 35409248 . + . Parent=GSCOCT00016221001 | |
| 24870 chr1 manual_curation exon 35408360 35408568 . + . Parent=GSCOCT00016221001 | |
| 24871 chr1 manual_curation exon 35408190 35408279 . + . Parent=GSCOCT00016221001 | |
| 24872 chr1 manual_curation exon 35407656 35407795 . + . Parent=GSCOCT00016221001 | |
| 24873 chr1 manual_curation exon 35407466 35407573 . + . Parent=GSCOCT00016221001 | |
| 24874 chr1 manual_curation exon 35407249 35407391 . + . Parent=GSCOCT00016221001 | |
| 24875 chr1 manual_curation exon 35407056 35407174 . + . Parent=GSCOCT00016221001 | |
| 24876 chr1 manual_curation CDS 35412034 35412082 . + 2 Parent=GSCOCT00016221001 | |
| 24877 chr1 manual_curation CDS 35411709 35411936 . + 2 Parent=GSCOCT00016221001 | |
| 24878 chr1 manual_curation CDS 35411055 35411306 . + 2 Parent=GSCOCT00016221001 | |
| 24879 chr1 manual_curation CDS 35409648 35410027 . + 0 Parent=GSCOCT00016221001 | |
| 24880 chr1 manual_curation CDS 35409381 35409490 . + 1 Parent=GSCOCT00016221001 | |
| 24881 chr1 manual_curation CDS 35409073 35409248 . + 2 Parent=GSCOCT00016221001 | |
| 24882 chr1 manual_curation CDS 35408360 35408568 . + 0 Parent=GSCOCT00016221001 | |
| 24883 chr1 manual_curation CDS 35408190 35408279 . + 0 Parent=GSCOCT00016221001 | |
| 24884 chr1 manual_curation CDS 35407656 35407795 . + 1 Parent=GSCOCT00016221001 | |
| 24885 chr1 manual_curation CDS 35407466 35407573 . + 1 Parent=GSCOCT00016221001 | |
| 24886 chr1 manual_curation CDS 35407249 35407391 . + 2 Parent=GSCOCT00016221001 | |
| 24887 chr1 manual_curation CDS 35407056 35407174 . + 0 Parent=GSCOCT00016221001 | |
| 24888 chr1 manual_curation gene 35413152 35414851 . + . ID=GSCOCG00016220001;Name=Cc01_g18310 | |
| 24889 chr1 manual_curation mRNA 35413152 35414851 . + . ID=GSCOCT00016220001;Parent=GSCOCG00016220001;Name=Cc01_g18310 | |
| 24890 chr1 manual_curation polypeptide 35413152 35414851 . + . ID=GSCOCP00016220001;Dbxref=GENE3D:G3DSA:3.40.525.10,InterPro:IPR001251,InterPro:IPR008273,InterPro:IPR011074,PFAM:PF00650,PFAM:PF03765,PROFILE:PS50191,SMART:SM00516,SUPERFAMILY:SSF46938,SUPERFAMILY:SSF52087,SwissProt:Q56Z59,SwissProt:Q94C59,SwissProt:Q9M0R2,TAIR:AT1G30690.1,TAIR:AT1G72160.1,TAIR:AT4G09160.1,TrEMBL:A5BW68,TrEMBL:D7U305,TrEMBL:F6HM05;Derives_from=GSCOCT00016220001;Name=Cc01_g18310;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Patellin-3,CC_functional_completeness:fragment,CC_gene:PATL4,CC_gene:PATL3,CC_gene:PATL5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016220001~ Putative Patellin-3~ PATL4~ fragment;original_location=complement(join(1837269..1838039%2C1837023..1837147%2C1836738..1836879%2C1836340..1836603));owner=coffea | |
| 24891 chr1 manual_curation exon 35414588 35414851 . + . Parent=GSCOCT00016220001 | |
| 24892 chr1 manual_curation exon 35414312 35414453 . + . Parent=GSCOCT00016220001 | |
| 24893 chr1 manual_curation exon 35414044 35414168 . + . Parent=GSCOCT00016220001 | |
| 24894 chr1 manual_curation exon 35413152 35413922 . + . Parent=GSCOCT00016220001 | |
| 24895 chr1 manual_curation CDS 35414588 35414851 . + 0 Parent=GSCOCT00016220001 | |
| 24896 chr1 manual_curation CDS 35414312 35414453 . + 2 Parent=GSCOCT00016220001 | |
| 24897 chr1 manual_curation CDS 35414044 35414168 . + 0 Parent=GSCOCT00016220001 | |
| 24898 chr1 manual_curation CDS 35413152 35413922 . + 0 Parent=GSCOCT00016220001 | |
| 24899 chr1 manual_curation gene 35415712 35417483 . + . ID=GSCOCG00016219001;Name=Cc01_g18320 | |
| 24900 chr1 manual_curation mRNA 35415712 35417483 . + . ID=GSCOCT00016219001;Parent=GSCOCG00016219001;Name=Cc01_g18320 | |
| 24901 chr1 manual_curation polypeptide 35415712 35417420 . + . ID=GSCOCP00016219001;Dbxref=GENE3D:G3DSA:2.60.120.10,InterPro:IPR006044,InterPro:IPR006045,InterPro:IPR011051,InterPro:IPR014710,PFAM:PF00190,PRINTS:PR00439,SMART:SM00835,SUPERFAMILY:SSF51182,SwissProt:P07730,SwissProt:P13744,SwissProt:Q9XHP0,TAIR:AT1G03880.1,TAIR:AT1G03890.1,TAIR:AT5G44120.3,TrEMBL:A0EM47,TrEMBL:Q2XSW6,TrEMBL:Q9AUD2;Derives_from=GSCOCT00016219001;Name=Cc01_g18320;Ontology_term=CC_evidence_code:ISS,GO:0045735,CC_EC_number:missing_EC_number,PRODUCT:Putative 11S globulin subunit beta,CC_functional_completeness:complete,CC_gene:GLUA2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016219001~ Putative 11S globulin subunit beta~ GLUA2~ complete;original_location=complement(join(1835255..1835479%2C1835047..1835111%2C1834863..1834992%2C1834571..1834750%2C1834315..1834515%2C1833771..1834148));owner=coffea | |
| 24902 chr1 manual_curation exon 35417043 35417483 . + . Parent=GSCOCT00016219001 | |
| 24903 chr1 manual_curation exon 35416676 35416876 . + . Parent=GSCOCT00016219001 | |
| 24904 chr1 manual_curation exon 35416441 35416620 . + . Parent=GSCOCT00016219001 | |
| 24905 chr1 manual_curation exon 35416199 35416328 . + . Parent=GSCOCT00016219001 | |
| 24906 chr1 manual_curation exon 35416080 35416144 . + . Parent=GSCOCT00016219001 | |
| 24907 chr1 manual_curation exon 35415712 35415936 . + . Parent=GSCOCT00016219001 | |
| 24908 chr1 manual_curation CDS 35417043 35417420 . + 0 Parent=GSCOCT00016219001 | |
| 24909 chr1 manual_curation CDS 35416676 35416876 . + 0 Parent=GSCOCT00016219001 | |
| 24910 chr1 manual_curation CDS 35416441 35416620 . + 0 Parent=GSCOCT00016219001 | |
| 24911 chr1 manual_curation CDS 35416199 35416328 . + 2 Parent=GSCOCT00016219001 | |
| 24912 chr1 manual_curation CDS 35416080 35416144 . + 0 Parent=GSCOCT00016219001 | |
| 24913 chr1 manual_curation CDS 35415712 35415936 . + 0 Parent=GSCOCT00016219001 | |
| 24914 chr1 manual_curation gene 35419671 35420968 . + . ID=GSCOCG00016218001;Name=Cc01_g18330 | |
| 24915 chr1 manual_curation mRNA 35419671 35420968 . + . ID=GSCOCT00016218001;Parent=GSCOCG00016218001;Name=Cc01_g18330 | |
| 24916 chr1 manual_curation polypeptide 35420027 35420796 . + . ID=GSCOCP00016218001;Dbxref=TAIR:AT2G20515.1,TrEMBL:B9GS12,TrEMBL:B9H8M4,TrEMBL:D7U301;Derives_from=GSCOCT00016218001;Name=Cc01_g18330;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016218001~ Putative unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 16 plant structures%3B EXPRESSED DURING: 7 growth stages%3B Has 71 Blast hits to 71 proteins in 14 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 71%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(1830998..1831164%2C1830395..1830731));owner=coffea | |
| 24917 chr1 manual_curation exon 35420460 35420968 . + . Parent=GSCOCT00016218001 | |
| 24918 chr1 manual_curation exon 35419671 35420193 . + . Parent=GSCOCT00016218001 | |
| 24919 chr1 manual_curation CDS 35420460 35420796 . + 2 Parent=GSCOCT00016218001 | |
| 24920 chr1 manual_curation CDS 35420027 35420193 . + 0 Parent=GSCOCT00016218001 | |
| 24921 chr1 manual_curation gene 35421878 35427310 . + . ID=GSCOCG00016217001;Name=Cc01_g18340 | |
| 24922 chr1 manual_curation mRNA 35421878 35427310 . + . ID=GSCOCT00016217001;Parent=GSCOCG00016217001;Name=Cc01_g18340 | |
| 24923 chr1 manual_curation polypeptide 35422001 35426809 . + . ID=GSCOCP00016217001;Dbxref=InterPro:IPR007379,PFAM:PF04280,SwissProt:O35094,SwissProt:O35857,SwissProt:O43615,TAIR:AT2G20510.1,TAIR:AT2G36070.1,TrEMBL:B9GS13,TrEMBL:B9SF39,TrEMBL:D7U300;Derives_from=GSCOCT00016217001;Name=Cc01_g18340;Ontology_term=CC_evidence_code:ISS,GO:0005744,GO:0006886,GO:0015450,CC_EC_number:missing_EC_number,PRODUCT:translocase inner membrane subunit 44-2,CC_functional_completeness:complete,CC_gene:Timm44,CC_gene:TIMM44;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016217001~ translocase inner membrane subunit 44-2~ Timm44~ complete;original_location=complement(join(1829113..1829190%2C1828864..1828979%2C1828121..1828204%2C1827909..1827984%2C1827648..1827692%2C1827109..1827552%2C1826936..1827004%2C1826134..1826198%2C1825984..1826052%2C1825828..1825900%2C1825614..1825718%2C1825123..1825194%2C1824937..1824999%2C1824382..1824513));owner=coffea | |
| 24924 chr1 manual_curation exon 35426678 35427310 . + . Parent=GSCOCT00016217001 | |
| 24925 chr1 manual_curation exon 35426192 35426254 . + . Parent=GSCOCT00016217001 | |
| 24926 chr1 manual_curation exon 35425997 35426068 . + . Parent=GSCOCT00016217001 | |
| 24927 chr1 manual_curation exon 35425473 35425577 . + . Parent=GSCOCT00016217001 | |
| 24928 chr1 manual_curation exon 35425291 35425363 . + . Parent=GSCOCT00016217001 | |
| 24929 chr1 manual_curation exon 35425139 35425207 . + . Parent=GSCOCT00016217001 | |
| 24930 chr1 manual_curation exon 35424993 35425057 . + . Parent=GSCOCT00016217001 | |
| 24931 chr1 manual_curation exon 35424187 35424255 . + . Parent=GSCOCT00016217001 | |
| 24932 chr1 manual_curation exon 35423639 35424082 . + . Parent=GSCOCT00016217001 | |
| 24933 chr1 manual_curation exon 35423499 35423543 . + . Parent=GSCOCT00016217001 | |
| 24934 chr1 manual_curation exon 35423207 35423282 . + . Parent=GSCOCT00016217001 | |
| 24935 chr1 manual_curation exon 35422987 35423070 . + . Parent=GSCOCT00016217001 | |
| 24936 chr1 manual_curation exon 35422212 35422327 . + . Parent=GSCOCT00016217001 | |
| 24937 chr1 manual_curation exon 35421878 35422078 . + . Parent=GSCOCT00016217001 | |
| 24938 chr1 manual_curation CDS 35426678 35426809 . + 0 Parent=GSCOCT00016217001 | |
| 24939 chr1 manual_curation CDS 35426192 35426254 . + 0 Parent=GSCOCT00016217001 | |
| 24940 chr1 manual_curation CDS 35425997 35426068 . + 0 Parent=GSCOCT00016217001 | |
| 24941 chr1 manual_curation CDS 35425473 35425577 . + 0 Parent=GSCOCT00016217001 | |
| 24942 chr1 manual_curation CDS 35425291 35425363 . + 2 Parent=GSCOCT00016217001 | |
| 24943 chr1 manual_curation CDS 35425139 35425207 . + 2 Parent=GSCOCT00016217001 | |
| 24944 chr1 manual_curation CDS 35424993 35425057 . + 0 Parent=GSCOCT00016217001 | |
| 24945 chr1 manual_curation CDS 35424187 35424255 . + 0 Parent=GSCOCT00016217001 | |
| 24946 chr1 manual_curation CDS 35423639 35424082 . + 0 Parent=GSCOCT00016217001 | |
| 24947 chr1 manual_curation CDS 35423499 35423543 . + 0 Parent=GSCOCT00016217001 | |
| 24948 chr1 manual_curation CDS 35423207 35423282 . + 2 Parent=GSCOCT00016217001 | |
| 24949 chr1 manual_curation CDS 35422987 35423070 . + 2 Parent=GSCOCT00016217001 | |
| 24950 chr1 manual_curation CDS 35422212 35422327 . + 0 Parent=GSCOCT00016217001 | |
| 24951 chr1 manual_curation CDS 35422001 35422078 . + 0 Parent=GSCOCT00016217001 | |
| 24952 chr1 manual_curation gene 35429433 35430146 . + . ID=GSCOCG00016216001;Name=Cc01_g18350 | |
| 24953 chr1 manual_curation mRNA 35429433 35430146 . + . ID=GSCOCT00016216001;Parent=GSCOCG00016216001;Name=Cc01_g18350 | |
| 24954 chr1 manual_curation polypeptide 35429433 35430146 . + . ID=GSCOCP00016216001;Dbxref=TrEMBL:B9GS14,TrEMBL:B9SF43,TrEMBL:F6HZK1;Derives_from=GSCOCT00016216001;Name=Cc01_g18350;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016216001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=complement(1821045..1821758);owner=coffea | |
| 24955 chr1 manual_curation exon 35429433 35430146 . + . Parent=GSCOCT00016216001 | |
| 24956 chr1 manual_curation CDS 35429433 35430146 . + 0 Parent=GSCOCT00016216001 | |
| 24957 chr1 manual_curation gene 35430366 35434789 . - . ID=GSCOCG00016215001;Name=Cc01_g18360 | |
| 24958 chr1 manual_curation mRNA 35430366 35434789 . - . ID=GSCOCT00016215001;Parent=GSCOCG00016215001;Name=Cc01_g18360 | |
| 24959 chr1 manual_curation polypeptide 35430797 35434572 . - . ID=GSCOCP00016215001;Dbxref=InterPro:IPR021715,PFAM:PF11708,SwissProt:A2YQU8,SwissProt:Q6ZK48,SwissProt:Q9SHY8,TAIR:AT1G65660.1,TAIR:AT3G45950.1,TAIR:AT4G37120.1,TrEMBL:B9I2T5,TrEMBL:I1KK11,TrEMBL:I1N2J3;Derives_from=GSCOCT00016215001;Name=Cc01_g18360;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pre-mRNA-splicing factor SLU7,CC_functional_completeness:complete,CC_gene:Os08g0127700,CC_gene:OsI_27673,CC_gene:At1g65660;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016215001~ Pre-mRNA-splicing factor SLU7~ Os08g0127700~ complete;original_location=join(1816619..1816634%2C1816921..1817084%2C1817252..1817364%2C1817621..1818031%2C1818183..1818318%2C1818434..1818733%2C1819445..1819661%2C1819966..1820069%2C1820160..1820228%2C1820320..1820394);owner=coffea | |
| 24960 chr1 manual_curation exon 35434557 35434789 . - . Parent=GSCOCT00016215001 | |
| 24961 chr1 manual_curation exon 35434107 35434270 . - . Parent=GSCOCT00016215001 | |
| 24962 chr1 manual_curation exon 35433827 35433939 . - . Parent=GSCOCT00016215001 | |
| 24963 chr1 manual_curation exon 35433160 35433570 . - . Parent=GSCOCT00016215001 | |
| 24964 chr1 manual_curation exon 35432873 35433008 . - . Parent=GSCOCT00016215001 | |
| 24965 chr1 manual_curation exon 35432458 35432757 . - . Parent=GSCOCT00016215001 | |
| 24966 chr1 manual_curation exon 35431530 35431746 . - . Parent=GSCOCT00016215001 | |
| 24967 chr1 manual_curation exon 35431122 35431225 . - . Parent=GSCOCT00016215001 | |
| 24968 chr1 manual_curation exon 35430963 35431031 . - . Parent=GSCOCT00016215001 | |
| 24969 chr1 manual_curation exon 35430366 35430871 . - . Parent=GSCOCT00016215001 | |
| 24970 chr1 manual_curation CDS 35434557 35434572 . - 0 Parent=GSCOCT00016215001 | |
| 24971 chr1 manual_curation CDS 35434107 35434270 . - 1 Parent=GSCOCT00016215001 | |
| 24972 chr1 manual_curation CDS 35433827 35433939 . - 0 Parent=GSCOCT00016215001 | |
| 24973 chr1 manual_curation CDS 35433160 35433570 . - 2 Parent=GSCOCT00016215001 | |
| 24974 chr1 manual_curation CDS 35432873 35433008 . - 2 Parent=GSCOCT00016215001 | |
| 24975 chr1 manual_curation CDS 35432458 35432757 . - 0 Parent=GSCOCT00016215001 | |
| 24976 chr1 manual_curation CDS 35431530 35431746 . - 0 Parent=GSCOCT00016215001 | |
| 24977 chr1 manual_curation CDS 35431122 35431225 . - 1 Parent=GSCOCT00016215001 | |
| 24978 chr1 manual_curation CDS 35430963 35431031 . - 0 Parent=GSCOCT00016215001 | |
| 24979 chr1 manual_curation CDS 35430797 35430871 . - 0 Parent=GSCOCT00016215001 | |
| 24980 chr1 manual_curation gene 35441823 35444087 . - . ID=GSCOCG00016214001;Name=Cc01_g18370 | |
| 24981 chr1 manual_curation mRNA 35441823 35444087 . - . ID=GSCOCT00016214001;Parent=GSCOCG00016214001;Name=Cc01_g18370 | |
| 24982 chr1 manual_curation polypeptide 35442548 35443870 . - . ID=GSCOCP00016214001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001005,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR014778,InterPro:IPR015495,InterPro:IPR017930,PANTHER:PTHR10641,PFAM:PF00249,PROFILE:PS51294,SMART:SM00717,SUPERFAMILY:SSF46689,SwissProt:P20024,SwissProt:P81395,SwissProt:Q7XBH4,TAIR:AT1G06180.1,TAIR:AT2G31180.1,TAIR:AT3G23250.1,TrEMBL:A7ULI0,TrEMBL:B2CZJ1,TrEMBL:Q9SLT2;Derives_from=GSCOCT00016214001;Name=Cc01_g18370;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative myb domain protein 15,CC_functional_completeness:complete,CC_gene:MYB4,CC_gene:MYB330;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016214001~ Putative myb domain protein 15~ MYB4~ complete;original_location=join(1807321..1807453%2C1807592..1807721%2C1808073..1808643);owner=coffea | |
| 24983 chr1 manual_curation exon 35443738 35444087 . - . Parent=GSCOCT00016214001 | |
| 24984 chr1 manual_curation exon 35443470 35443599 . - . Parent=GSCOCT00016214001 | |
| 24985 chr1 manual_curation exon 35441823 35443118 . - . Parent=GSCOCT00016214001 | |
| 24986 chr1 manual_curation CDS 35443738 35443870 . - 0 Parent=GSCOCT00016214001 | |
| 24987 chr1 manual_curation CDS 35443470 35443599 . - 1 Parent=GSCOCT00016214001 | |
| 24988 chr1 manual_curation CDS 35442548 35443118 . - 2 Parent=GSCOCT00016214001 | |
| 24989 chr1 manual_curation gene 35461366 35462764 . - . ID=GSCOCG00016212001;Name=Cc01_g18380 | |
| 24990 chr1 manual_curation mRNA 35461366 35462764 . - . ID=GSCOCT00016212001;Parent=GSCOCG00016212001;Name=Cc01_g18380 | |
| 24991 chr1 manual_curation polypeptide 35461561 35462764 . - . ID=GSCOCP00016212001;Dbxref=TrEMBL:A5C0G0,TrEMBL:B9S3T9,TrEMBL:C5Y174;Derives_from=GSCOCT00016212001;Name=Cc01_g18380;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016212001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(1788427..1788915%2C1789255..1789299%2C1789355..1789630);owner=coffea | |
| 24992 chr1 manual_curation exon 35462276 35462764 . - . Parent=GSCOCT00016212001 | |
| 24993 chr1 manual_curation exon 35461892 35461936 . - . Parent=GSCOCT00016212001 | |
| 24994 chr1 manual_curation exon 35461366 35461836 . - . Parent=GSCOCT00016212001 | |
| 24995 chr1 manual_curation CDS 35462276 35462764 . - 0 Parent=GSCOCT00016212001 | |
| 24996 chr1 manual_curation CDS 35461892 35461936 . - 0 Parent=GSCOCT00016212001 | |
| 24997 chr1 manual_curation CDS 35461561 35461836 . - 0 Parent=GSCOCT00016212001 | |
| 24998 chr1 manual_curation gene 35464950 35466247 . - . ID=GSCOCG00016211001;Name=Cc01_g18390 | |
| 24999 chr1 manual_curation mRNA 35464950 35466247 . - . ID=GSCOCT00016211001;Parent=GSCOCG00016211001;Name=Cc01_g18390 | |
| 25000 chr1 manual_curation polypeptide 35465337 35466161 . - . ID=GSCOCP00016211001;Dbxref=GENE3D:G3DSA:3.30.730.10,InterPro:IPR001471,InterPro:IPR016177,PFAM:PF00847,PRINTS:PR00367,PROFILE:PS51032,SMART:SM00380,SUPERFAMILY:SSF54171,SwissProt:Q8LDC8,SwissProt:Q8VYM0,SwissProt:Q9LND1,TAIR:AT1G06160.1,TAIR:AT2G31230.1,TAIR:AT3G23240.1,TrEMBL:A5B237,TrEMBL:D8VD37,TrEMBL:F6HZJ0;Derives_from=GSCOCT00016211001;Name=Cc01_g18390;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,CC_EC_number:missing_EC_number,PRODUCT:Ethylene-responsive transcription factor 1B,CC_functional_completeness:modules,CC_gene:ERF1B,CC_gene:ERF15,CC_gene:ERF094;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016211001~ Ethylene-responsive transcription factor 1B~ ERF1B~ modules;original_location=1785030..1785854;owner=coffea | |
| 25001 chr1 manual_curation exon 35464950 35466247 . - . Parent=GSCOCT00016211001 | |
| 25002 chr1 manual_curation CDS 35465337 35466161 . - 0 Parent=GSCOCT00016211001 | |
| 25003 chr1 manual_curation gene 35481478 35481945 . + . ID=GSCOCG00016210001;Name=Cc01_g18400 | |
| 25004 chr1 manual_curation mRNA 35481478 35481945 . + . ID=GSCOCT00016210001;Parent=GSCOCG00016210001;Name=Cc01_g18400 | |
| 25005 chr1 manual_curation polypeptide 35481478 35481945 . + . ID=GSCOCP00016210001;Dbxref=GENE3D:G3DSA:3.30.730.10,InterPro:IPR001471,InterPro:IPR016177,PFAM:PF00847,PRINTS:PR00367,PROFILE:PS51032,SMART:SM00380,SUPERFAMILY:SSF54171,SwissProt:O04681,SwissProt:Q8VY90,SwissProt:Q9LTC5,TAIR:AT3G23230.1,TAIR:AT5G43410.1,TAIR:AT5G51190.1,TrEMBL:B9GS21,TrEMBL:B9H8L0,TrEMBL:I1MGW5;Derives_from=GSCOCT00016210001;Name=Cc01_g18400;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,CC_EC_number:missing_EC_number,PRODUCT:Ethylene-responsive transcription factor ERF098,CC_functional_completeness:complete,CC_gene:ERF098,CC_gene:PTI5,CC_gene:ERF105;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016210001~ Ethylene-responsive transcription factor ERF098~ ERF098~ complete;original_location=complement(1769246..1769713);owner=coffea | |
| 25006 chr1 manual_curation exon 35481478 35481945 . + . Parent=GSCOCT00016210001 | |
| 25007 chr1 manual_curation CDS 35481478 35481945 . + 0 Parent=GSCOCT00016210001 | |
| 25008 chr1 manual_curation gene 35490887 35492541 . + . ID=GSCOCG00016208001;Name=Cc01_g18410 | |
| 25009 chr1 manual_curation mRNA 35490887 35492541 . + . ID=GSCOCT00016208001;Parent=GSCOCG00016208001;Name=Cc01_g18410 | |
| 25010 chr1 manual_curation polypeptide 35490947 35492440 . + . ID=GSCOCP00016208001;Dbxref=InterPro:IPR005123,PFAM:PF03171,SwissProt:P24397,SwissProt:Q40061,SwissProt:Q40062,TAIR:AT4G10490.1,TAIR:AT4G10500.1,TAIR:AT5G24530.1,TrEMBL:B9H8K9,TrEMBL:B9T297,TrEMBL:D7U2Y4;Derives_from=GSCOCT00016208001;Name=Cc01_g18410;Ontology_term=CC_evidence_code:ISS,GO:0016491,CC_EC_number:1.14.11.11,PRODUCT:Putative Hyoscyamine 6-dioxygenase,CC_functional_completeness:complete,CC_gene:H6H,CC_gene:IDS3,CC_gene:IDS2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016208001~ Putative Hyoscyamine 6-dioxygenase~ H6H~ complete;original_location=complement(join(1760038..1760244%2C1759612..1759862%2C1759148..1759466%2C1758751..1759002));owner=coffea | |
| 25011 chr1 manual_curation exon 35492189 35492541 . + . Parent=GSCOCT00016208001 | |
| 25012 chr1 manual_curation exon 35491725 35492043 . + . Parent=GSCOCT00016208001 | |
| 25013 chr1 manual_curation exon 35491329 35491579 . + . Parent=GSCOCT00016208001 | |
| 25014 chr1 manual_curation exon 35490887 35491153 . + . Parent=GSCOCT00016208001 | |
| 25015 chr1 manual_curation CDS 35492189 35492440 . + 0 Parent=GSCOCT00016208001 | |
| 25016 chr1 manual_curation CDS 35491725 35492043 . + 2 Parent=GSCOCT00016208001 | |
| 25017 chr1 manual_curation CDS 35491329 35491579 . + 0 Parent=GSCOCT00016208001 | |
| 25018 chr1 manual_curation CDS 35490947 35491153 . + 0 Parent=GSCOCT00016208001 | |
| 25019 chr1 manual_curation gene 35492631 35495811 . - . ID=GSCOCG00016207001;Name=Cc01_g18420 | |
| 25020 chr1 manual_curation mRNA 35492631 35495811 . - . ID=GSCOCT00016207001;Parent=GSCOCG00016207001;Name=Cc01_g18420 | |
| 25021 chr1 manual_curation polypeptide 35493868 35495811 . - . ID=GSCOCP00016207001;Dbxref=InterPro:IPR005123,PFAM:PF03171,SwissProt:P24397,SwissProt:Q40061,SwissProt:Q40062,TAIR:AT4G10490.1,TAIR:AT4G10500.1,TAIR:AT5G24530.1,TrEMBL:B9GS24,TrEMBL:B9H8K9,TrEMBL:D7U2Y4;Derives_from=GSCOCT00016207001;Name=Cc01_g18420;Ontology_term=CC_evidence_code:ISS,GO:0016491,CC_EC_number:1.14.11.9,PRODUCT:Putative Hyoscyamine 6-dioxygenase,CC_functional_completeness:complete,CC_gene:H6H,CC_gene:IDS3,CC_gene:IDS2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016207001~ Putative Hyoscyamine 6-dioxygenase~ H6H~ complete;original_location=join(1755380..1755589%2C1755765..1756021%2C1756179..1756497%2C1757081..1757323);owner=coffea | |
| 25022 chr1 manual_curation exon 35495602 35495811 . - . Parent=GSCOCT00016207001 | |
| 25023 chr1 manual_curation exon 35495170 35495426 . - . Parent=GSCOCT00016207001 | |
| 25024 chr1 manual_curation exon 35494694 35495012 . - . Parent=GSCOCT00016207001 | |
| 25025 chr1 manual_curation exon 35492631 35494110 . - . Parent=GSCOCT00016207001 | |
| 25026 chr1 manual_curation CDS 35495602 35495811 . - 0 Parent=GSCOCT00016207001 | |
| 25027 chr1 manual_curation CDS 35495170 35495426 . - 0 Parent=GSCOCT00016207001 | |
| 25028 chr1 manual_curation CDS 35494694 35495012 . - 2 Parent=GSCOCT00016207001 | |
| 25029 chr1 manual_curation CDS 35493868 35494110 . - 0 Parent=GSCOCT00016207001 | |
| 25030 chr1 manual_curation gene 35501442 35502470 . + . ID=GSCOCG00016206001;Name=Cc01_g18430 | |
| 25031 chr1 manual_curation mRNA 35501442 35502470 . + . ID=GSCOCT00016206001;Parent=GSCOCG00016206001;Name=Cc01_g18430 | |
| 25032 chr1 manual_curation polypeptide 35501442 35502470 . + . ID=GSCOCP00016206001;Dbxref=InterPro:IPR001841,InterPro:IPR018957,PFAM:PF00097,PROFILE:PS50089,SMART:SM00184,SwissProt:P93823,SwissProt:Q9LF64,SwissProt:Q9LSW9,TAIR:AT1G04360.1,TAIR:AT5G17600.1,TAIR:AT5G43420.1,TrEMBL:B9GS25,TrEMBL:B9T298,TrEMBL:I1L8D0;Derives_from=GSCOCT00016206001;Name=Cc01_g18430;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative RING-H2 finger protein ATL16,CC_functional_completeness:complete,CC_gene:ATL16,CC_gene:ATL1,CC_gene:ATL52;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016206001~ Putative RING-H2 finger protein ATL16~ ATL16~ complete;original_location=complement(1748721..1749749);owner=coffea | |
| 25033 chr1 manual_curation exon 35501442 35502470 . + . Parent=GSCOCT00016206001 | |
| 25034 chr1 manual_curation CDS 35501442 35502470 . + 0 Parent=GSCOCT00016206001 | |
| 25035 chr1 manual_curation gene 35503983 35506965 . - . ID=GSCOCG00016205001;Name=Cc01_g18440 | |
| 25036 chr1 manual_curation mRNA 35503983 35506965 . - . ID=GSCOCT00016205001;Parent=GSCOCG00016205001;Name=Cc01_g18440 | |
| 25037 chr1 manual_curation polypeptide 35504244 35506851 . - . ID=GSCOCP00016205001;Dbxref=GENE3D:G3DSA:1.25.40.10,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR019734,PROFILE:PS50293,SMART:SM00028,TAIR:AT2G31240.1,TAIR:AT3G27960.1,TAIR:AT4G10840.1,TrEMBL:B9T299,TrEMBL:F6HZI1,TrEMBL:I1LYJ0;Derives_from=GSCOCT00016205001;Name=Cc01_g18440;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:Tetratricopeptide repeat (TPR)-like superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016205001~ Tetratricopeptide repeat (TPR)-like superfamily protein~ unknown_gene~ complete;original_location=join(1744340..1746015%2C1746701..1746947);owner=coffea | |
| 25038 chr1 manual_curation exon 35505176 35506965 . - . Parent=GSCOCT00016205001 | |
| 25039 chr1 manual_curation exon 35503983 35504490 . - . Parent=GSCOCT00016205001 | |
| 25040 chr1 manual_curation CDS 35505176 35506851 . - 0 Parent=GSCOCT00016205001 | |
| 25041 chr1 manual_curation CDS 35504244 35504490 . - 2 Parent=GSCOCT00016205001 | |
| 25042 chr1 manual_curation gene 35508017 35512190 . + . ID=GSCOCG00016204001;Name=Cc01_g18450 | |
| 25043 chr1 manual_curation mRNA 35508017 35512190 . + . ID=GSCOCT00016204001;Parent=GSCOCG00016204001;Name=Cc01_g18450 | |
| 25044 chr1 manual_curation polypeptide 35508130 35511723 . + . ID=GSCOCP00016204001;Dbxref=InterPro:IPR014939,PFAM:PF08839,SwissProt:Q9M1S9,SwissProt:Q9SJW9,TAIR:AT2G31270.1,TAIR:AT3G54710.1,TrEMBL:B9H8K6,TrEMBL:B9T2A2,TrEMBL:F6HZH9;Derives_from=GSCOCT00016204001;Name=Cc01_g18450;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative CDT1-like protein a%2C chloroplastic,CC_functional_completeness:complete,CC_gene:CDT1A,CC_gene:CDT1B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016204001~ Putative CDT1-like protein a%2C chloroplastic~ CDT1A~ complete;original_location=complement(join(1742691..1743061%2C1742384..1742503%2C1742048..1742282%2C1740236..1740955%2C1739848..1740049%2C1739677..1739767%2C1739468..1739525));owner=coffea | |
| 25045 chr1 manual_curation exon 35511666 35512190 . + . Parent=GSCOCT00016204001 | |
| 25046 chr1 manual_curation exon 35511424 35511514 . + . Parent=GSCOCT00016204001 | |
| 25047 chr1 manual_curation exon 35511142 35511343 . + . Parent=GSCOCT00016204001 | |
| 25048 chr1 manual_curation exon 35510236 35510955 . + . Parent=GSCOCT00016204001 | |
| 25049 chr1 manual_curation exon 35508909 35509143 . + . Parent=GSCOCT00016204001 | |
| 25050 chr1 manual_curation exon 35508688 35508807 . + . Parent=GSCOCT00016204001 | |
| 25051 chr1 manual_curation exon 35508017 35508500 . + . Parent=GSCOCT00016204001 | |
| 25052 chr1 manual_curation CDS 35511666 35511723 . + 2 Parent=GSCOCT00016204001 | |
| 25053 chr1 manual_curation CDS 35511424 35511514 . + 1 Parent=GSCOCT00016204001 | |
| 25054 chr1 manual_curation CDS 35511142 35511343 . + 0 Parent=GSCOCT00016204001 | |
| 25055 chr1 manual_curation CDS 35510236 35510955 . + 0 Parent=GSCOCT00016204001 | |
| 25056 chr1 manual_curation CDS 35508909 35509143 . + 2 Parent=GSCOCT00016204001 | |
| 25057 chr1 manual_curation CDS 35508688 35508807 . + 2 Parent=GSCOCT00016204001 | |
| 25058 chr1 manual_curation CDS 35508130 35508500 . + 0 Parent=GSCOCT00016204001 | |
| 25059 chr1 manual_curation gene 35512985 35513797 . + . ID=GSCOCG00016203001;Name=Cc01_g18460 | |
| 25060 chr1 manual_curation mRNA 35512985 35513797 . + . ID=GSCOCT00016203001;Parent=GSCOCG00016203001;Name=Cc01_g18460 | |
| 25061 chr1 manual_curation polypeptide 35512985 35513797 . + . ID=GSCOCP00016203001;Dbxref=TrEMBL:B9GS29,TrEMBL:B9T2A4;Derives_from=GSCOCT00016203001;Name=Cc01_g18460;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016203001~ Putative uncharacterized protein~ unknown_gene~ modules;original_location=complement(1737394..1738206);owner=coffea | |
| 25062 chr1 manual_curation exon 35512985 35513797 . + . Parent=GSCOCT00016203001 | |
| 25063 chr1 manual_curation CDS 35512985 35513797 . + 0 Parent=GSCOCT00016203001 | |
| 25064 chr1 manual_curation gene 35516390 35516542 . + . ID=GSCOCG00016202001;Name=Cc01_g18470 | |
| 25065 chr1 manual_curation mRNA 35516390 35516542 . + . ID=GSCOCT00016202001;Parent=GSCOCG00016202001;Name=Cc01_g18470 | |
| 25066 chr1 manual_curation polypeptide 35516390 35516542 . + . ID=GSCOCP00016202001;Dbxref=SwissProt:Q8L4R0,TAIR:AT1G19800.2,TrEMBL:G7IYB6,TrEMBL:I1LC64,TrEMBL:I1NI83;Derives_from=GSCOCT00016202001;Name=Cc01_g18470;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein TRIGALACTOSYLDIACYLGLYCEROL 1%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:TGD1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016202001~ Protein TRIGALACTOSYLDIACYLGLYCEROL 1%2C chloroplastic~ TGD1~ fragment;original_location=complement(1734649..1734801);owner=coffea | |
| 25067 chr1 manual_curation exon 35516390 35516542 . + . Parent=GSCOCT00016202001 | |
| 25068 chr1 manual_curation CDS 35516390 35516542 . + 0 Parent=GSCOCT00016202001 | |
| 25069 chr1 manual_curation gene 35527350 35534237 . + . ID=GSCOCG00016200001;Name=Cc01_g18480 | |
| 25070 chr1 manual_curation mRNA 35527350 35534237 . + . ID=GSCOCT00016200001;Parent=GSCOCG00016200001;Name=Cc01_g18480 | |
| 25071 chr1 manual_curation polypeptide 35527418 35533850 . + . ID=GSCOCP00016200001;Dbxref=InterPro:IPR001092,InterPro:IPR011598,PROFILE:PS50888,SUPERFAMILY:SSF47459,SwissProt:P0C7P8,SwissProt:Q58G01,SwissProt:Q9XIN0,TAIR:AT1G06150.1,TAIR:AT2G27230.1,TAIR:AT2G31280.3,TrEMBL:B9T2A6,TrEMBL:F6HZH8,TrEMBL:I1L8C6;Derives_from=GSCOCT00016200001;Name=Cc01_g18480;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0030528,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative Transcription factor EMB1444,CC_functional_completeness:complete,CC_gene:EMB1444,CC_gene:BHLH155,CC_gene:LHW;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016200001~ Putative Transcription factor EMB1444~ EMB1444~ complete;original_location=complement(join(1723712..1723773%2C1723417..1723560%2C1722637..1722798%2C1722237..1722321%2C1722073..1722114%2C1720801..1720860%2C1720504..1720626%2C1719276..1720421%2C1719088..1719189%2C1717837..1717977%2C1717602..1717727%2C1717341..1717436));owner=coffea | |
| 25072 chr1 manual_curation exon 35533755 35534237 . + . Parent=GSCOCT00016200001 | |
| 25073 chr1 manual_curation exon 35533464 35533589 . + . Parent=GSCOCT00016200001 | |
| 25074 chr1 manual_curation exon 35533214 35533354 . + . Parent=GSCOCT00016200001 | |
| 25075 chr1 manual_curation exon 35532002 35532103 . + . Parent=GSCOCT00016200001 | |
| 25076 chr1 manual_curation exon 35530770 35531915 . + . Parent=GSCOCT00016200001 | |
| 25077 chr1 manual_curation exon 35530565 35530687 . + . Parent=GSCOCT00016200001 | |
| 25078 chr1 manual_curation exon 35530331 35530390 . + . Parent=GSCOCT00016200001 | |
| 25079 chr1 manual_curation exon 35529077 35529118 . + . Parent=GSCOCT00016200001 | |
| 25080 chr1 manual_curation exon 35528870 35528954 . + . Parent=GSCOCT00016200001 | |
| 25081 chr1 manual_curation exon 35528393 35528554 . + . Parent=GSCOCT00016200001 | |
| 25082 chr1 manual_curation exon 35527631 35527774 . + . Parent=GSCOCT00016200001 | |
| 25083 chr1 manual_curation exon 35527350 35527479 . + . Parent=GSCOCT00016200001 | |
| 25084 chr1 manual_curation CDS 35533755 35533850 . + 0 Parent=GSCOCT00016200001 | |
| 25085 chr1 manual_curation CDS 35533464 35533589 . + 0 Parent=GSCOCT00016200001 | |
| 25086 chr1 manual_curation CDS 35533214 35533354 . + 0 Parent=GSCOCT00016200001 | |
| 25087 chr1 manual_curation CDS 35532002 35532103 . + 0 Parent=GSCOCT00016200001 | |
| 25088 chr1 manual_curation CDS 35530770 35531915 . + 0 Parent=GSCOCT00016200001 | |
| 25089 chr1 manual_curation CDS 35530565 35530687 . + 0 Parent=GSCOCT00016200001 | |
| 25090 chr1 manual_curation CDS 35530331 35530390 . + 0 Parent=GSCOCT00016200001 | |
| 25091 chr1 manual_curation CDS 35529077 35529118 . + 0 Parent=GSCOCT00016200001 | |
| 25092 chr1 manual_curation CDS 35528870 35528954 . + 2 Parent=GSCOCT00016200001 | |
| 25093 chr1 manual_curation CDS 35528393 35528554 . + 2 Parent=GSCOCT00016200001 | |
| 25094 chr1 manual_curation CDS 35527631 35527774 . + 2 Parent=GSCOCT00016200001 | |
| 25095 chr1 manual_curation CDS 35527418 35527479 . + 0 Parent=GSCOCT00016200001 | |
| 25096 chr1 manual_curation gene 35535524 35537827 . - . ID=GSCOCG00016199001;Name=Cc01_g18490 | |
| 25097 chr1 manual_curation mRNA 35535524 35537827 . - . ID=GSCOCT00016199001;Parent=GSCOCG00016199001;Name=Cc01_g18490 | |
| 25098 chr1 manual_curation polypeptide 35535864 35537597 . - . ID=GSCOCP00016199001;Dbxref=InterPro:IPR005123,PFAM:PF03171,SwissProt:Q84MB3,SwissProt:Q9LSW7,SwissProt:Q9LTH8,TAIR:AT1G06620.1,TAIR:AT5G43440.1,TAIR:AT5G59530.1,TrEMBL:A5AYM1,TrEMBL:B9T2A7,TrEMBL:D7U2X5;Derives_from=GSCOCT00016199001;Name=Cc01_g18490;Ontology_term=CC_evidence_code:ISS,GO:0016491,CC_EC_number:1.14.11.20,PRODUCT:Putative 1-aminocyclopropane-1-carboxylate oxidase homolog 1,CC_functional_completeness:complete,CC_gene:At1g06620,CC_gene:At5g59530,CC_gene:At5g43440;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016199001~ Putative 1-aminocyclopropane-1-carboxylate oxidase homolog 1~ At1g06620~ complete;original_location=join(1713594..1714162%2C1714675..1714996%2C1715076..1715327);owner=coffea | |
| 25099 chr1 manual_curation exon 35537029 35537827 . - . Parent=GSCOCT00016199001 | |
| 25100 chr1 manual_curation exon 35536195 35536516 . - . Parent=GSCOCT00016199001 | |
| 25101 chr1 manual_curation exon 35535524 35536115 . - . Parent=GSCOCT00016199001 | |
| 25102 chr1 manual_curation CDS 35537029 35537597 . - 0 Parent=GSCOCT00016199001 | |
| 25103 chr1 manual_curation CDS 35536195 35536516 . - 2 Parent=GSCOCT00016199001 | |
| 25104 chr1 manual_curation CDS 35535864 35536115 . - 0 Parent=GSCOCT00016199001 | |
| 25105 chr1 manual_curation gene 35538279 35542277 . + . ID=GSCOCG00016198001;Name=Cc01_g18500 | |
| 25106 chr1 manual_curation mRNA 35538279 35542277 . + . ID=GSCOCT00016198001;Parent=GSCOCG00016198001;Name=Cc01_g18500 | |
| 25107 chr1 manual_curation polypeptide 35538523 35542133 . + . ID=GSCOCP00016198001;Dbxref=InterPro:IPR002921,PFAM:PF01764,SwissProt:P0C1S9,SwissProt:Q5YLM1,SwissProt:Q9Y4D2,TAIR:AT2G42450.1,TAIR:AT3G14075.1,TAIR:AT4G16070.1,TrEMBL:B9H8K0,TrEMBL:B9T2A9,TrEMBL:F6HZH7;Derives_from=GSCOCT00016198001;Name=Cc01_g18500;Ontology_term=CC_evidence_code:ISS,GO:0004806,GO:0006629,CC_EC_number:missing_EC_number,PRODUCT:alpha/beta-Hydrolases superfamily protein,CC_functional_completeness:complete,CC_gene:DAGLA,CC_gene:Daglb,CC_gene:Dagla;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016198001~ alpha/beta-Hydrolases superfamily protein~ DAGLA~ complete;original_location=complement(join(1712626..1712668%2C1712162..1712485%2C1711504..1711703%2C1711011..1711361%2C1710717..1710917%2C1710521..1710591%2C1710172..1710311%2C1709058..1709407));owner=coffea | |
| 25108 chr1 manual_curation exon 35541784 35542277 . + . Parent=GSCOCT00016198001 | |
| 25109 chr1 manual_curation exon 35540880 35541019 . + . Parent=GSCOCT00016198001 | |
| 25110 chr1 manual_curation exon 35540600 35540670 . + . Parent=GSCOCT00016198001 | |
| 25111 chr1 manual_curation exon 35540274 35540474 . + . Parent=GSCOCT00016198001 | |
| 25112 chr1 manual_curation exon 35539830 35540180 . + . Parent=GSCOCT00016198001 | |
| 25113 chr1 manual_curation exon 35539488 35539687 . + . Parent=GSCOCT00016198001 | |
| 25114 chr1 manual_curation exon 35538706 35539029 . + . Parent=GSCOCT00016198001 | |
| 25115 chr1 manual_curation exon 35538279 35538565 . + . Parent=GSCOCT00016198001 | |
| 25116 chr1 manual_curation CDS 35541784 35542133 . + 1 Parent=GSCOCT00016198001 | |
| 25117 chr1 manual_curation CDS 35540880 35541019 . + 2 Parent=GSCOCT00016198001 | |
| 25118 chr1 manual_curation CDS 35540600 35540670 . + 0 Parent=GSCOCT00016198001 | |
| 25119 chr1 manual_curation CDS 35540274 35540474 . + 0 Parent=GSCOCT00016198001 | |
| 25120 chr1 manual_curation CDS 35539830 35540180 . + 0 Parent=GSCOCT00016198001 | |
| 25121 chr1 manual_curation CDS 35539488 35539687 . + 1 Parent=GSCOCT00016198001 | |
| 25122 chr1 manual_curation CDS 35538706 35539029 . + 1 Parent=GSCOCT00016198001 | |
| 25123 chr1 manual_curation CDS 35538523 35538565 . + 0 Parent=GSCOCT00016198001 | |
| 25124 chr1 manual_curation gene 35551830 35552646 . + . ID=GSCOCG00016197001;Name=Cc01_g18510 | |
| 25125 chr1 manual_curation mRNA 35551830 35552646 . + . ID=GSCOCT00016197001;Parent=GSCOCG00016197001;Name=Cc01_g18510 | |
| 25126 chr1 manual_curation polypeptide 35551830 35552646 . + . ID=GSCOCP00016197001;Dbxref=InterPro:IPR004883,PFAM:PF03195,PROFILE:PS50891,SwissProt:Q9M2J7,SwissProt:Q9SJW5,SwissProt:Q9SLB6,TAIR:AT2G31310.1,TAIR:AT2G42440.1,TAIR:AT3G58190.1,TrEMBL:A5AIW9,TrEMBL:B9T847,TrEMBL:D7U2X1;Derives_from=GSCOCT00016197001;Name=Cc01_g18510;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:LOB domain-containing protein 14,CC_functional_completeness:complete,CC_gene:LBD29,CC_gene:LBD17,CC_gene:LBD14;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016197001~ LOB domain-containing protein 14~ LBD29~ complete;original_location=complement(join(1699083..1699361%2C1698545..1698970));owner=coffea | |
| 25127 chr1 manual_curation exon 35552221 35552646 . + . Parent=GSCOCT00016197001 | |
| 25128 chr1 manual_curation exon 35551830 35552108 . + . Parent=GSCOCT00016197001 | |
| 25129 chr1 manual_curation CDS 35552221 35552646 . + 0 Parent=GSCOCT00016197001 | |
| 25130 chr1 manual_curation CDS 35551830 35552108 . + 0 Parent=GSCOCT00016197001 | |
| 25131 chr1 manual_curation gene 35560349 35561400 . - . ID=GSCOCG00016196001;Name=Cc01_g18520 | |
| 25132 chr1 manual_curation mRNA 35560349 35561400 . - . ID=GSCOCT00016196001;Parent=GSCOCG00016196001;Name=Cc01_g18520 | |
| 25133 chr1 manual_curation polypeptide 35560469 35561400 . - . ID=GSCOCP00016196001;Dbxref=InterPro:IPR004883,PFAM:PF03195,PROFILE:PS50891,SwissProt:Q9M2J7,SwissProt:Q9SLB6,SwissProt:Q9SLB7,TAIR:AT2G42430.1,TAIR:AT2G42440.1,TAIR:AT3G58190.1,TrEMBL:B9H8J9,TrEMBL:B9S4L6,TrEMBL:D7U2X2;Derives_from=GSCOCT00016196001;Name=Cc01_g18520;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:LOB domain-containing protein 16,CC_functional_completeness:complete,CC_gene:LBD16,CC_gene:LBD29,CC_gene:LBD17;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016196001~ LOB domain-containing protein 16~ LBD16~ complete;original_location=join(1689791..1690072%2C1690393..1690722);owner=coffea | |
| 25134 chr1 manual_curation exon 35561119 35561400 . - . Parent=GSCOCT00016196001 | |
| 25135 chr1 manual_curation exon 35560349 35560798 . - . Parent=GSCOCT00016196001 | |
| 25136 chr1 manual_curation CDS 35561119 35561400 . - 0 Parent=GSCOCT00016196001 | |
| 25137 chr1 manual_curation CDS 35560469 35560798 . - 0 Parent=GSCOCT00016196001 | |
| 25138 chr1 manual_curation gene 35563789 35573074 . - . ID=GSCOCG00016195001;Name=Cc01_g18530 | |
| 25139 chr1 manual_curation mRNA 35563789 35573074 . - . ID=GSCOCT00016195001;Parent=GSCOCG00016195001;Name=Cc01_g18530 | |
| 25140 chr1 manual_curation polypeptide 35564217 35572962 . - . ID=GSCOCP00016195001;Dbxref=GENE3D:G3DSA:1.20.142.10,GENE3D:G3DSA:3.30.1740.10,InterPro:IPR001357,InterPro:IPR001510,InterPro:IPR004102,InterPro:IPR008288,InterPro:IPR008893,InterPro:IPR012317,InterPro:IPR012982,PFAM:PF00533,PFAM:PF00644,PFAM:PF00645,PFAM:PF02877,PFAM:PF05406,PFAM:PF08063,PIR:PIRSF000489,PROFILE:PS50064,PROFILE:PS50172,PROFILE:PS51059,PROFILE:PS51060,SMART:SM00292,SMART:SM00773,SUPERFAMILY:SSF47587,SUPERFAMILY:SSF52113,SwissProt:Q7EYV7,SwissProt:Q9ZP54,SwissProt:Q9ZSV1,TAIR:AT2G31320.1,TAIR:AT4G02390.1,TAIR:AT5G22470.1,TrEMBL:B9GS36,TrEMBL:B9S4L5,TrEMBL:D7U2X3;Derives_from=GSCOCT00016195001;Name=Cc01_g18530;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003950,GO:0005622,GO:0005634,GO:0006471,GO:0008270,GO:0051287,CC_EC_number:2.4.2.30,PRODUCT:Poly [ADP-ribose] polymerase 1,CC_functional_completeness:complete,CC_gene:PARP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016195001~ Poly [ADP-ribose] polymerase 1~ PARP1~ complete;original_location=join(1678229..1678372%2C1679730..1679779%2C1679903..1680086%2C1680883..1681066%2C1681164..1681485%2C1681861..1682056%2C1682147..1682311%2C1682469..1682529%2C1682623..1682686%2C1682761..1683012%2C1683679..1683916%2C1684046..1684161%2C1684251..1684327%2C1684486..1684646%2C1684894..1685085%2C1685195..1685303%2C1685473..1685555%2C1685670..1685807%2C1685994..1686173%2C1686930..1686974);owner=coffea | |
| 25141 chr1 manual_curation exon 35572819 35573074 . - . Parent=GSCOCT00016195001 | |
| 25142 chr1 manual_curation exon 35571412 35571461 . - . Parent=GSCOCT00016195001 | |
| 25143 chr1 manual_curation exon 35571105 35571288 . - . Parent=GSCOCT00016195001 | |
| 25144 chr1 manual_curation exon 35570125 35570308 . - . Parent=GSCOCT00016195001 | |
| 25145 chr1 manual_curation exon 35569706 35570027 . - . Parent=GSCOCT00016195001 | |
| 25146 chr1 manual_curation exon 35569135 35569330 . - . Parent=GSCOCT00016195001 | |
| 25147 chr1 manual_curation exon 35568880 35569044 . - . Parent=GSCOCT00016195001 | |
| 25148 chr1 manual_curation exon 35568662 35568722 . - . Parent=GSCOCT00016195001 | |
| 25149 chr1 manual_curation exon 35568505 35568568 . - . Parent=GSCOCT00016195001 | |
| 25150 chr1 manual_curation exon 35568179 35568430 . - . Parent=GSCOCT00016195001 | |
| 25151 chr1 manual_curation exon 35567275 35567512 . - . Parent=GSCOCT00016195001 | |
| 25152 chr1 manual_curation exon 35567030 35567145 . - . Parent=GSCOCT00016195001 | |
| 25153 chr1 manual_curation exon 35566864 35566940 . - . Parent=GSCOCT00016195001 | |
| 25154 chr1 manual_curation exon 35566545 35566705 . - . Parent=GSCOCT00016195001 | |
| 25155 chr1 manual_curation exon 35566106 35566297 . - . Parent=GSCOCT00016195001 | |
| 25156 chr1 manual_curation exon 35565888 35565996 . - . Parent=GSCOCT00016195001 | |
| 25157 chr1 manual_curation exon 35565636 35565718 . - . Parent=GSCOCT00016195001 | |
| 25158 chr1 manual_curation exon 35565384 35565521 . - . Parent=GSCOCT00016195001 | |
| 25159 chr1 manual_curation exon 35565018 35565197 . - . Parent=GSCOCT00016195001 | |
| 25160 chr1 manual_curation exon 35563789 35564261 . - . Parent=GSCOCT00016195001 | |
| 25161 chr1 manual_curation CDS 35572819 35572962 . - 0 Parent=GSCOCT00016195001 | |
| 25162 chr1 manual_curation CDS 35571412 35571461 . - 0 Parent=GSCOCT00016195001 | |
| 25163 chr1 manual_curation CDS 35571105 35571288 . - 2 Parent=GSCOCT00016195001 | |
| 25164 chr1 manual_curation CDS 35570125 35570308 . - 0 Parent=GSCOCT00016195001 | |
| 25165 chr1 manual_curation CDS 35569706 35570027 . - 1 Parent=GSCOCT00016195001 | |
| 25166 chr1 manual_curation CDS 35569135 35569330 . - 2 Parent=GSCOCT00016195001 | |
| 25167 chr1 manual_curation CDS 35568880 35569044 . - 0 Parent=GSCOCT00016195001 | |
| 25168 chr1 manual_curation CDS 35568662 35568722 . - 0 Parent=GSCOCT00016195001 | |
| 25169 chr1 manual_curation CDS 35568505 35568568 . - 1 Parent=GSCOCT00016195001 | |
| 25170 chr1 manual_curation CDS 35568179 35568430 . - 2 Parent=GSCOCT00016195001 | |
| 25171 chr1 manual_curation CDS 35567275 35567512 . - 2 Parent=GSCOCT00016195001 | |
| 25172 chr1 manual_curation CDS 35567030 35567145 . - 0 Parent=GSCOCT00016195001 | |
| 25173 chr1 manual_curation CDS 35566864 35566940 . - 2 Parent=GSCOCT00016195001 | |
| 25174 chr1 manual_curation CDS 35566545 35566705 . - 1 Parent=GSCOCT00016195001 | |
| 25175 chr1 manual_curation CDS 35566106 35566297 . - 0 Parent=GSCOCT00016195001 | |
| 25176 chr1 manual_curation CDS 35565888 35565996 . - 0 Parent=GSCOCT00016195001 | |
| 25177 chr1 manual_curation CDS 35565636 35565718 . - 1 Parent=GSCOCT00016195001 | |
| 25178 chr1 manual_curation CDS 35565384 35565521 . - 0 Parent=GSCOCT00016195001 | |
| 25179 chr1 manual_curation CDS 35565018 35565197 . - 0 Parent=GSCOCT00016195001 | |
| 25180 chr1 manual_curation CDS 35564217 35564261 . - 0 Parent=GSCOCT00016195001 | |
| 25181 chr1 manual_curation gene 35576095 35578908 . + . ID=GSCOCG00016194001;Name=Cc01_g18540 | |
| 25182 chr1 manual_curation mRNA 35576095 35578908 . + . ID=GSCOCT00016194001;Parent=GSCOCG00016194001;Name=Cc01_g18540 | |
| 25183 chr1 manual_curation polypeptide 35576657 35578563 . + . ID=GSCOCP00016194001;Dbxref=InterPro:IPR000727,PFAM:PF05739,PROFILE:PS50192,SMART:SM00397,SwissProt:Q94CG2,SwissProt:Q9M2J9,TAIR:AT3G58170.1,TAIR:AT4G14455.1,TrEMBL:B9GS38,TrEMBL:B9H8J7,TrEMBL:D7U2W9;Derives_from=GSCOCT00016194001;Name=Cc01_g18540;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Bet1-like SNARE 1-1,CC_functional_completeness:complete,CC_gene:BET11,CC_gene:BET12;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016194001~ Bet1-like SNARE 1-1~ BET11~ complete;original_location=complement(join(1674521..1674534%2C1673554..1673701%2C1672975..1673031%2C1672824..1672883%2C1672628..1672717));owner=coffea | |
| 25184 chr1 manual_curation exon 35578474 35578908 . + . Parent=GSCOCT00016194001 | |
| 25185 chr1 manual_curation exon 35578308 35578367 . + . Parent=GSCOCT00016194001 | |
| 25186 chr1 manual_curation exon 35578160 35578216 . + . Parent=GSCOCT00016194001 | |
| 25187 chr1 manual_curation exon 35577490 35577637 . + . Parent=GSCOCT00016194001 | |
| 25188 chr1 manual_curation exon 35576095 35576670 . + . Parent=GSCOCT00016194001 | |
| 25189 chr1 manual_curation CDS 35578474 35578563 . + 0 Parent=GSCOCT00016194001 | |
| 25190 chr1 manual_curation CDS 35578308 35578367 . + 0 Parent=GSCOCT00016194001 | |
| 25191 chr1 manual_curation CDS 35578160 35578216 . + 0 Parent=GSCOCT00016194001 | |
| 25192 chr1 manual_curation CDS 35577490 35577637 . + 2 Parent=GSCOCT00016194001 | |
| 25193 chr1 manual_curation CDS 35576657 35576670 . + 0 Parent=GSCOCT00016194001 | |
| 25194 chr1 manual_curation gene 35591439 35592082 . - . ID=GSCOCG00016191001;Name=Cc01_g18550 | |
| 25195 chr1 manual_curation mRNA 35591439 35592082 . - . ID=GSCOCT00016191001;Parent=GSCOCG00016191001;Name=Cc01_g18550 | |
| 25196 chr1 manual_curation polypeptide 35591439 35592082 . - . ID=GSCOCP00016191001;Dbxref=InterPro:IPR007087,InterPro:IPR015880,PROFILE:PS50157,PROSITE:PS00028,SMART:SM00355,SwissProt:Q38895,SwissProt:Q9LHS9,TAIR:AT2G42410.1,TAIR:AT3G23130.1,TAIR:AT5G06070.1,TrEMBL:B9HKF8,TrEMBL:B9HUB8,TrEMBL:B9STJ9;Derives_from=GSCOCT00016191001;Name=Cc01_g18550;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative Transcriptional regulator SUPERMAN,CC_functional_completeness:complete,CC_gene:SUP,CC_gene:RBE;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016191001~ Putative Transcriptional regulator SUPERMAN~ SUP~ complete;original_location=join(1659109..1659457%2C1659508..1659752);owner=coffea | |
| 25197 chr1 manual_curation exon 35591734 35592082 . - . Parent=GSCOCT00016191001 | |
| 25198 chr1 manual_curation exon 35591439 35591683 . - . Parent=GSCOCT00016191001 | |
| 25199 chr1 manual_curation CDS 35591734 35592082 . - 0 Parent=GSCOCT00016191001 | |
| 25200 chr1 manual_curation CDS 35591439 35591683 . - 1 Parent=GSCOCT00016191001 | |
| 25201 chr1 manual_curation gene 35593198 35597353 . - . ID=GSCOCG00016190001;Name=Cc01_g18560 | |
| 25202 chr1 manual_curation mRNA 35593198 35597353 . - . ID=GSCOCT00016190001;Parent=GSCOCG00016190001;Name=Cc01_g18560 | |
| 25203 chr1 manual_curation polypeptide 35593336 35597353 . - . ID=GSCOCP00016190001;Dbxref=InterPro:IPR002710,InterPro:IPR018444,PFAM:PF01843,PROFILE:PS51126,SwissProt:P54696,TAIR:AT1G08730.1,TAIR:AT1G54560.1,TAIR:AT5G20490.1,TrEMBL:A5ARX4,TrEMBL:B9S7I4,TrEMBL:F6HVL1;Derives_from=GSCOCT00016190001;Name=Cc01_g18560;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Myosin family protein with Dil domain,CC_functional_completeness:fragment,CC_gene:myoH;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016190001~ Myosin family protein with Dil domain~ myoH~ fragment;original_location=join(1653838..1653888%2C1653983..1654027%2C1654101..1654355%2C1654429..1654587%2C1654661..1654867%2C1654960..1655103%2C1656317..1656387%2C1656496..1656595%2C1656666..1656722%2C1657020..1657076%2C1657164..1657244%2C1657530..1657612%2C1657732..1657855);owner=coffea | |
| 25204 chr1 manual_curation exon 35597303 35597353 . - . Parent=GSCOCT00016190001 | |
| 25205 chr1 manual_curation exon 35597164 35597208 . - . Parent=GSCOCT00016190001 | |
| 25206 chr1 manual_curation exon 35596836 35597090 . - . Parent=GSCOCT00016190001 | |
| 25207 chr1 manual_curation exon 35596604 35596762 . - . Parent=GSCOCT00016190001 | |
| 25208 chr1 manual_curation exon 35596324 35596530 . - . Parent=GSCOCT00016190001 | |
| 25209 chr1 manual_curation exon 35596088 35596231 . - . Parent=GSCOCT00016190001 | |
| 25210 chr1 manual_curation exon 35594804 35594874 . - . Parent=GSCOCT00016190001 | |
| 25211 chr1 manual_curation exon 35594596 35594695 . - . Parent=GSCOCT00016190001 | |
| 25212 chr1 manual_curation exon 35594469 35594525 . - . Parent=GSCOCT00016190001 | |
| 25213 chr1 manual_curation exon 35594115 35594171 . - . Parent=GSCOCT00016190001 | |
| 25214 chr1 manual_curation exon 35593947 35594027 . - . Parent=GSCOCT00016190001 | |
| 25215 chr1 manual_curation exon 35593579 35593661 . - . Parent=GSCOCT00016190001 | |
| 25216 chr1 manual_curation exon 35593198 35593459 . - . Parent=GSCOCT00016190001 | |
| 25217 chr1 manual_curation CDS 35597303 35597353 . - 0 Parent=GSCOCT00016190001 | |
| 25218 chr1 manual_curation CDS 35597164 35597208 . - 0 Parent=GSCOCT00016190001 | |
| 25219 chr1 manual_curation CDS 35596836 35597090 . - 0 Parent=GSCOCT00016190001 | |
| 25220 chr1 manual_curation CDS 35596604 35596762 . - 0 Parent=GSCOCT00016190001 | |
| 25221 chr1 manual_curation CDS 35596324 35596530 . - 0 Parent=GSCOCT00016190001 | |
| 25222 chr1 manual_curation CDS 35596088 35596231 . - 0 Parent=GSCOCT00016190001 | |
| 25223 chr1 manual_curation CDS 35594804 35594874 . - 0 Parent=GSCOCT00016190001 | |
| 25224 chr1 manual_curation CDS 35594596 35594695 . - 2 Parent=GSCOCT00016190001 | |
| 25225 chr1 manual_curation CDS 35594469 35594525 . - 0 Parent=GSCOCT00016190001 | |
| 25226 chr1 manual_curation CDS 35594115 35594171 . - 0 Parent=GSCOCT00016190001 | |
| 25227 chr1 manual_curation CDS 35593947 35594027 . - 0 Parent=GSCOCT00016190001 | |
| 25228 chr1 manual_curation CDS 35593579 35593661 . - 0 Parent=GSCOCT00016190001 | |
| 25229 chr1 manual_curation CDS 35593336 35593459 . - 2 Parent=GSCOCT00016190001 | |
| 25230 chr1 manual_curation gene 35600048 35612356 . - . ID=GSCOCG00016189001;Name=Cc01_g18570 | |
| 25231 chr1 manual_curation mRNA 35600048 35612356 . - . ID=GSCOCT00016189001;Parent=GSCOCG00016189001;Name=Cc01_g18570 | |
| 25232 chr1 manual_curation polypeptide 35600048 35611577 . - . ID=GSCOCP00016189001;Dbxref=InterPro:IPR000048,InterPro:IPR001609,InterPro:IPR004009,PFAM:PF00063,PFAM:PF00612,PFAM:PF02736,PRINTS:PR00193,PROFILE:PS50096,SMART:SM00015,SMART:SM00242,SwissProt:P21271,SwissProt:P54697,SwissProt:Q9ULV0,TAIR:AT1G08730.1,TAIR:AT1G54560.1,TAIR:AT5G20490.1,TrEMBL:A5ARX4,TrEMBL:F6HVL1,TrEMBL:F6HZH4;Derives_from=GSCOCT00016189001;Name=Cc01_g18570;Ontology_term=CC_evidence_code:ISS,GO:0003774,GO:0005524,GO:0016459,CC_EC_number:missing_EC_number,PRODUCT:Myosin family protein with Dil domain,CC_functional_completeness:fragment,CC_gene:myoJ,CC_gene:MYO5B,CC_gene:Myo5b;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016189001~ Myosin family protein with Dil domain~ myoJ~ fragment;original_location=join(1639614..1639787%2C1639991..1640200%2C1640945..1641088%2C1641218..1641363%2C1641447..1641603%2C1641708..1641744%2C1641793..1641904%2C1641978..1642140%2C1642390..1642448%2C1642549..1642708%2C1642789..1642938%2C1643030..1643166%2C1643238..1643384%2C1643480..1643581%2C1643684..1643741%2C1643813..1643914%2C1644620..1644657%2C1644786..1644912%2C1645009..1645191%2C1645326..1645457%2C1645534..1645643%2C1645766..1645861%2C1646350..1646423%2C1646580..1646780%2C1647014..1647219%2C1647297..1647416%2C1647884..1647982%2C1648353..1648574%2C1648682..1648821%2C1650581..1650831%2C1651091..1651143);owner=coffea | |
| 25233 chr1 manual_curation exon 35611404 35612356 . - . Parent=GSCOCT00016189001 | |
| 25234 chr1 manual_curation exon 35610991 35611200 . - . Parent=GSCOCT00016189001 | |
| 25235 chr1 manual_curation exon 35610103 35610246 . - . Parent=GSCOCT00016189001 | |
| 25236 chr1 manual_curation exon 35609828 35609973 . - . Parent=GSCOCT00016189001 | |
| 25237 chr1 manual_curation exon 35609588 35609744 . - . Parent=GSCOCT00016189001 | |
| 25238 chr1 manual_curation exon 35609447 35609483 . - . Parent=GSCOCT00016189001 | |
| 25239 chr1 manual_curation exon 35609287 35609398 . - . Parent=GSCOCT00016189001 | |
| 25240 chr1 manual_curation exon 35609051 35609213 . - . Parent=GSCOCT00016189001 | |
| 25241 chr1 manual_curation exon 35608743 35608801 . - . Parent=GSCOCT00016189001 | |
| 25242 chr1 manual_curation exon 35608483 35608642 . - . Parent=GSCOCT00016189001 | |
| 25243 chr1 manual_curation exon 35608253 35608402 . - . Parent=GSCOCT00016189001 | |
| 25244 chr1 manual_curation exon 35608025 35608161 . - . Parent=GSCOCT00016189001 | |
| 25245 chr1 manual_curation exon 35607807 35607953 . - . Parent=GSCOCT00016189001 | |
| 25246 chr1 manual_curation exon 35607610 35607711 . - . Parent=GSCOCT00016189001 | |
| 25247 chr1 manual_curation exon 35607450 35607507 . - . Parent=GSCOCT00016189001 | |
| 25248 chr1 manual_curation exon 35607277 35607378 . - . Parent=GSCOCT00016189001 | |
| 25249 chr1 manual_curation exon 35606534 35606571 . - . Parent=GSCOCT00016189001 | |
| 25250 chr1 manual_curation exon 35606279 35606405 . - . Parent=GSCOCT00016189001 | |
| 25251 chr1 manual_curation exon 35606000 35606182 . - . Parent=GSCOCT00016189001 | |
| 25252 chr1 manual_curation exon 35605734 35605865 . - . Parent=GSCOCT00016189001 | |
| 25253 chr1 manual_curation exon 35605548 35605657 . - . Parent=GSCOCT00016189001 | |
| 25254 chr1 manual_curation exon 35605330 35605425 . - . Parent=GSCOCT00016189001 | |
| 25255 chr1 manual_curation exon 35604768 35604841 . - . Parent=GSCOCT00016189001 | |
| 25256 chr1 manual_curation exon 35604411 35604611 . - . Parent=GSCOCT00016189001 | |
| 25257 chr1 manual_curation exon 35603972 35604177 . - . Parent=GSCOCT00016189001 | |
| 25258 chr1 manual_curation exon 35603775 35603894 . - . Parent=GSCOCT00016189001 | |
| 25259 chr1 manual_curation exon 35603209 35603307 . - . Parent=GSCOCT00016189001 | |
| 25260 chr1 manual_curation exon 35602617 35602838 . - . Parent=GSCOCT00016189001 | |
| 25261 chr1 manual_curation exon 35602370 35602509 . - . Parent=GSCOCT00016189001 | |
| 25262 chr1 manual_curation exon 35600360 35600610 . - . Parent=GSCOCT00016189001 | |
| 25263 chr1 manual_curation exon 35600048 35600100 . - . Parent=GSCOCT00016189001 | |
| 25264 chr1 manual_curation CDS 35611404 35611577 . - 0 Parent=GSCOCT00016189001 | |
| 25265 chr1 manual_curation CDS 35610991 35611200 . - 0 Parent=GSCOCT00016189001 | |
| 25266 chr1 manual_curation CDS 35610103 35610246 . - 0 Parent=GSCOCT00016189001 | |
| 25267 chr1 manual_curation CDS 35609828 35609973 . - 0 Parent=GSCOCT00016189001 | |
| 25268 chr1 manual_curation CDS 35609588 35609744 . - 2 Parent=GSCOCT00016189001 | |
| 25269 chr1 manual_curation CDS 35609447 35609483 . - 0 Parent=GSCOCT00016189001 | |
| 25270 chr1 manual_curation CDS 35609287 35609398 . - 1 Parent=GSCOCT00016189001 | |
| 25271 chr1 manual_curation CDS 35609051 35609213 . - 2 Parent=GSCOCT00016189001 | |
| 25272 chr1 manual_curation CDS 35608743 35608801 . - 0 Parent=GSCOCT00016189001 | |
| 25273 chr1 manual_curation CDS 35608483 35608642 . - 2 Parent=GSCOCT00016189001 | |
| 25274 chr1 manual_curation CDS 35608253 35608402 . - 0 Parent=GSCOCT00016189001 | |
| 25275 chr1 manual_curation CDS 35608025 35608161 . - 0 Parent=GSCOCT00016189001 | |
| 25276 chr1 manual_curation CDS 35607807 35607953 . - 2 Parent=GSCOCT00016189001 | |
| 25277 chr1 manual_curation CDS 35607610 35607711 . - 2 Parent=GSCOCT00016189001 | |
| 25278 chr1 manual_curation CDS 35607450 35607507 . - 2 Parent=GSCOCT00016189001 | |
| 25279 chr1 manual_curation CDS 35607277 35607378 . - 0 Parent=GSCOCT00016189001 | |
| 25280 chr1 manual_curation CDS 35606534 35606571 . - 0 Parent=GSCOCT00016189001 | |
| 25281 chr1 manual_curation CDS 35606279 35606405 . - 2 Parent=GSCOCT00016189001 | |
| 25282 chr1 manual_curation CDS 35606000 35606182 . - 0 Parent=GSCOCT00016189001 | |
| 25283 chr1 manual_curation CDS 35605734 35605865 . - 0 Parent=GSCOCT00016189001 | |
| 25284 chr1 manual_curation CDS 35605548 35605657 . - 0 Parent=GSCOCT00016189001 | |
| 25285 chr1 manual_curation CDS 35605330 35605425 . - 2 Parent=GSCOCT00016189001 | |
| 25286 chr1 manual_curation CDS 35604768 35604841 . - 2 Parent=GSCOCT00016189001 | |
| 25287 chr1 manual_curation CDS 35604411 35604611 . - 1 Parent=GSCOCT00016189001 | |
| 25288 chr1 manual_curation CDS 35603972 35604177 . - 1 Parent=GSCOCT00016189001 | |
| 25289 chr1 manual_curation CDS 35603775 35603894 . - 0 Parent=GSCOCT00016189001 | |
| 25290 chr1 manual_curation CDS 35603209 35603307 . - 0 Parent=GSCOCT00016189001 | |
| 25291 chr1 manual_curation CDS 35602617 35602838 . - 0 Parent=GSCOCT00016189001 | |
| 25292 chr1 manual_curation CDS 35602370 35602509 . - 0 Parent=GSCOCT00016189001 | |
| 25293 chr1 manual_curation CDS 35600360 35600610 . - 2 Parent=GSCOCT00016189001 | |
| 25294 chr1 manual_curation CDS 35600048 35600100 . - 1 Parent=GSCOCT00016189001 | |
| 25295 chr1 manual_curation gene 35619683 35622896 . + . ID=GSCOCG00016188001;Name=Cc01_g18580 | |
| 25296 chr1 manual_curation mRNA 35619683 35622896 . + . ID=GSCOCT00016188001;Parent=GSCOCG00016188001;Name=Cc01_g18580 | |
| 25297 chr1 manual_curation polypeptide 35620051 35622449 . + . ID=GSCOCP00016188001;Dbxref=GENE3D:G3DSA:2.120.10.80,InterPro:IPR006652,InterPro:IPR011043,InterPro:IPR013089,InterPro:IPR015915,PANTHER:PTHR23230,PFAM:PF01344,SMART:SM00612,SUPERFAMILY:SSF50965,SwissProt:Q0V7S6,SwissProt:Q0WW40,SwissProt:Q9M1W7,TAIR:AT1G16250.1,TAIR:AT3G63220.2,TAIR:AT4G03030.1,TrEMBL:B9GS45,TrEMBL:B9S4V7,TrEMBL:F6HZH3;Derives_from=GSCOCT00016188001;Name=Cc01_g18580;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:F-box/kelch-repeat protein OR23,CC_functional_completeness:complete,CC_gene:OR23,CC_gene:At1g16250,CC_gene:SKIP30;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016188001~ F-box/kelch-repeat protein OR23~ OR23~ complete;original_location=complement(join(1630179..1631140%2C1628742..1629033));owner=coffea | |
| 25298 chr1 manual_curation exon 35622158 35622896 . + . Parent=GSCOCT00016188001 | |
| 25299 chr1 manual_curation exon 35619683 35621012 . + . Parent=GSCOCT00016188001 | |
| 25300 chr1 manual_curation CDS 35622158 35622449 . + 2 Parent=GSCOCT00016188001 | |
| 25301 chr1 manual_curation CDS 35620051 35621012 . + 0 Parent=GSCOCT00016188001 | |
| 25302 chr1 manual_curation gene 35627031 35630048 . - . ID=GSCOCG00016185001;Name=Cc01_g18590 | |
| 25303 chr1 manual_curation mRNA 35627031 35630048 . - . ID=GSCOCT00016185001;Parent=GSCOCG00016185001;Name=Cc01_g18590 | |
| 25304 chr1 manual_curation polypeptide 35628579 35630048 . - . ID=GSCOCP00016185001;Dbxref=GENE3D:G3DSA:4.10.280.10,InterPro:IPR001092,InterPro:IPR011598,PFAM:PF00010,PROFILE:PS50888,SMART:SM00353,SUPERFAMILY:SSF47459,SwissProt:O23487,SwissProt:Q9LNJ5,SwissProt:Q9ZPY8,TAIR:AT1G01260.1,TAIR:AT2G46510.1,TAIR:AT4G16430.1,TrEMBL:B9GS46,TrEMBL:B9H8J2,TrEMBL:D9ZIN7;Derives_from=GSCOCT00016185001;Name=Cc01_g18590;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0030528,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Transcription factor bHLH3,CC_functional_completeness:complete,CC_gene:BHLH3,CC_gene:AIB,CC_gene:BHLH13;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016185001~ Transcription factor bHLH3~ BHLH3~ complete;original_location=join(1621143..1622030%2C1622088..1622612);owner=coffea | |
| 25305 chr1 manual_curation exon 35629161 35630048 . - . Parent=GSCOCT00016185001 | |
| 25306 chr1 manual_curation exon 35627031 35629103 . - . Parent=GSCOCT00016185001 | |
| 25307 chr1 manual_curation CDS 35629161 35630048 . - 0 Parent=GSCOCT00016185001 | |
| 25308 chr1 manual_curation CDS 35628579 35629103 . - 0 Parent=GSCOCT00016185001 | |
| 25309 chr1 manual_curation gene 35630144 35630717 . - . ID=GSCOCG00016184001;Name=Cc01_g18600 | |
| 25310 chr1 manual_curation mRNA 35630144 35630717 . - . ID=GSCOCT00016184001;Parent=GSCOCG00016184001;Name=Cc01_g18600 | |
| 25311 chr1 manual_curation polypeptide 35630144 35630645 . - . ID=GSCOCP00016184001;Derives_from=GSCOCT00016184001;Name=Cc01_g18600;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016184001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(1620546..1620589%2C1621014..1621047);owner=coffea | |
| 25312 chr1 manual_curation exon 35630602 35630717 . - . Parent=GSCOCT00016184001 | |
| 25313 chr1 manual_curation exon 35630144 35630177 . - . Parent=GSCOCT00016184001 | |
| 25314 chr1 manual_curation CDS 35630602 35630645 . - 0 Parent=GSCOCT00016184001 | |
| 25315 chr1 manual_curation CDS 35630144 35630177 . - 2 Parent=GSCOCT00016184001 | |
| 25316 chr1 manual_curation gene 35634423 35636226 . - . ID=GSCOCG00016182001;Name=Cc01_g18610 | |
| 25317 chr1 manual_curation mRNA 35634423 35636226 . - . ID=GSCOCT00016182001;Parent=GSCOCG00016182001;Name=Cc01_g18610 | |
| 25318 chr1 manual_curation polypeptide 35634629 35636158 . - . ID=GSCOCP00016182001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,SUPERFAMILY:SSF48264,SwissProt:O81117,SwissProt:P98188,SwissProt:Q9FMY1,TAIR:AT3G48520.1,TAIR:AT3G56630.1,TAIR:AT5G63450.1,TrEMBL:Q8W2N1,TrEMBL:Q8W2N2,TrEMBL:Q8W2N4;Derives_from=GSCOCT00016182001;Name=Cc01_g18610;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.14.1,PRODUCT:Cytochrome P450 94A1,CC_functional_completeness:complete,CC_gene:CYP94A1,CC_gene:CYP94A2,CC_gene:CYP86B1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016182001~ Cytochrome P450 94A1~ CYP94A1~ complete;original_location=1615033..1616562;owner=coffea | |
| 25319 chr1 manual_curation exon 35634423 35636226 . - . Parent=GSCOCT00016182001 | |
| 25320 chr1 manual_curation CDS 35634629 35636158 . - 0 Parent=GSCOCT00016182001 | |
| 25321 chr1 manual_curation gene 35646954 35648486 . - . ID=GSCOCG00016181001;Name=Cc01_g18620 | |
| 25322 chr1 manual_curation mRNA 35646954 35648486 . - . ID=GSCOCT00016181001;Parent=GSCOCG00016181001;Name=Cc01_g18620 | |
| 25323 chr1 manual_curation polypeptide 35646954 35648486 . - . ID=GSCOCP00016181001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,SUPERFAMILY:SSF48264,SwissProt:O81117,SwissProt:P98188,SwissProt:Q9FMY1,TAIR:AT3G48520.1,TAIR:AT3G56630.1,TAIR:AT5G63450.1,TrEMBL:Q8W2N1,TrEMBL:Q8W2N2,TrEMBL:Q8W2N4;Derives_from=GSCOCT00016181001;Name=Cc01_g18620;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.14.1,PRODUCT:Cytochrome P450 94A1,CC_functional_completeness:complete,CC_gene:CYP94A1,CC_gene:CYP94A2,CC_gene:CYP86B1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016181001~ Cytochrome P450 94A1~ CYP94A1~ complete;original_location=1602705..1604237;owner=coffea | |
| 25324 chr1 manual_curation exon 35646954 35648486 . - . Parent=GSCOCT00016181001 | |
| 25325 chr1 manual_curation CDS 35646954 35648486 . - 0 Parent=GSCOCT00016181001 | |
| 25326 chr1 manual_curation gene 35650546 35652597 . - . ID=GSCOCG00016180001;Name=Cc01_g18630 | |
| 25327 chr1 manual_curation mRNA 35650546 35652597 . - . ID=GSCOCT00016180001;Parent=GSCOCG00016180001;Name=Cc01_g18630 | |
| 25328 chr1 manual_curation polypeptide 35651009 35652535 . - . ID=GSCOCP00016180001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,SUPERFAMILY:SSF48264,SwissProt:O81117,SwissProt:P98188,SwissProt:Q9FMY1,TAIR:AT3G48520.1,TAIR:AT3G56630.1,TAIR:AT5G63450.1,TrEMBL:Q8W2N1,TrEMBL:Q8W2N2,TrEMBL:Q8W2N4;Derives_from=GSCOCT00016180001;Name=Cc01_g18630;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.14.1,PRODUCT:Cytochrome P450 94A1,CC_functional_completeness:complete,CC_gene:CYP94A1,CC_gene:CYP94A2,CC_gene:CYP86B1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016180001~ Cytochrome P450 94A1~ CYP94A1~ complete;original_location=1598656..1600182;owner=coffea | |
| 25329 chr1 manual_curation exon 35650546 35652597 . - . Parent=GSCOCT00016180001 | |
| 25330 chr1 manual_curation CDS 35651009 35652535 . - 0 Parent=GSCOCT00016180001 | |
| 25331 chr1 manual_curation gene 35660158 35664296 . - . ID=GSCOCG00016178001;Name=Cc01_g18640 | |
| 25332 chr1 manual_curation mRNA 35660158 35664296 . - . ID=GSCOCT00016178001;Parent=GSCOCG00016178001;Name=Cc01_g18640 | |
| 25333 chr1 manual_curation polypeptide 35661399 35664296 . - . ID=GSCOCP00016178001;Dbxref=InterPro:IPR007656,PFAM:PF04576,TAIR:AT1G08800.1,TAIR:AT1G70750.1,TAIR:AT2G30690.1,TrEMBL:A5AJ61,TrEMBL:B9S4U6,TrEMBL:F6GXN0;Derives_from=GSCOCT00016178001;Name=Cc01_g18640;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016178001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=join(1586895..1588107%2C1588336..1589529%2C1589584..1589792);owner=coffea | |
| 25334 chr1 manual_curation exon 35663084 35664296 . - . Parent=GSCOCT00016178001 | |
| 25335 chr1 manual_curation exon 35661662 35662855 . - . Parent=GSCOCT00016178001 | |
| 25336 chr1 manual_curation exon 35660158 35661607 . - . Parent=GSCOCT00016178001 | |
| 25337 chr1 manual_curation CDS 35663084 35664296 . - 0 Parent=GSCOCT00016178001 | |
| 25338 chr1 manual_curation CDS 35661662 35662855 . - 1 Parent=GSCOCT00016178001 | |
| 25339 chr1 manual_curation CDS 35661399 35661607 . - 1 Parent=GSCOCT00016178001 | |
| 25340 chr1 manual_curation gene 35664361 35665184 . - . ID=GSCOCG00016177001;Name=Cc01_g18650 | |
| 25341 chr1 manual_curation mRNA 35664361 35665184 . - . ID=GSCOCT00016177001;Parent=GSCOCG00016177001;Name=Cc01_g18650 | |
| 25342 chr1 manual_curation polypeptide 35664361 35664997 . - . ID=GSCOCP00016177001;Derives_from=GSCOCT00016177001;Name=Cc01_g18650;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016177001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(1586194..1586282%2C1586767..1586830);owner=coffea | |
| 25343 chr1 manual_curation exon 35664909 35665184 . - . Parent=GSCOCT00016177001 | |
| 25344 chr1 manual_curation exon 35664361 35664424 . - . Parent=GSCOCT00016177001 | |
| 25345 chr1 manual_curation CDS 35664909 35664997 . - 0 Parent=GSCOCT00016177001 | |
| 25346 chr1 manual_curation CDS 35664361 35664424 . - 2 Parent=GSCOCT00016177001 | |
| 25347 chr1 manual_curation gene 35667879 35671447 . + . ID=GSCOCG00016175001;Name=Cc01_g18660 | |
| 25348 chr1 manual_curation mRNA 35667879 35671447 . + . ID=GSCOCT00016175001;Parent=GSCOCG00016175001;Name=Cc01_g18660 | |
| 25349 chr1 manual_curation polypeptide 35667947 35671447 . + . ID=GSCOCP00016175001;Dbxref=InterPro:IPR000808,InterPro:IPR019591,PFAM:PF10609,PROSITE:PS01215,SwissProt:Q54F15,SwissProt:Q8TB37,SwissProt:Q9CWD8,TAIR:AT3G24430.1,TAIR:AT4G19540.1,TAIR:AT5G50960.1,TrEMBL:B9H8I9,TrEMBL:B9S4U4,TrEMBL:I1L8B5;Derives_from=GSCOCT00016175001;Name=Cc01_g18660;Ontology_term=CC_evidence_code:ISS,GO:0005524,CC_EC_number:missing_EC_number,PRODUCT:Iron-sulfur protein NUBPL,CC_functional_completeness:complete,CC_gene:nubpl,CC_gene:NUBPL,CC_gene:Nubpl;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016175001~ Iron-sulfur protein NUBPL~ nubpl~ complete;original_location=complement(join(1583218..1583244%2C1582987..1583125%2C1582340..1582462%2C1582042..1582139%2C1581568..1581694%2C1580946..1581031%2C1580454..1580579%2C1579744..1579914));owner=coffea | |
| 25350 chr1 manual_curation exon 35671277 35671447 . + . Parent=GSCOCT00016175001 | |
| 25351 chr1 manual_curation exon 35670612 35670737 . + . Parent=GSCOCT00016175001 | |
| 25352 chr1 manual_curation exon 35670160 35670245 . + . Parent=GSCOCT00016175001 | |
| 25353 chr1 manual_curation exon 35669497 35669623 . + . Parent=GSCOCT00016175001 | |
| 25354 chr1 manual_curation exon 35669052 35669149 . + . Parent=GSCOCT00016175001 | |
| 25355 chr1 manual_curation exon 35668729 35668851 . + . Parent=GSCOCT00016175001 | |
| 25356 chr1 manual_curation exon 35668066 35668204 . + . Parent=GSCOCT00016175001 | |
| 25357 chr1 manual_curation exon 35667879 35667973 . + . Parent=GSCOCT00016175001 | |
| 25358 chr1 manual_curation CDS 35671277 35671447 . + 0 Parent=GSCOCT00016175001 | |
| 25359 chr1 manual_curation CDS 35670612 35670737 . + 0 Parent=GSCOCT00016175001 | |
| 25360 chr1 manual_curation CDS 35670160 35670245 . + 1 Parent=GSCOCT00016175001 | |
| 25361 chr1 manual_curation CDS 35669497 35669623 . + 0 Parent=GSCOCT00016175001 | |
| 25362 chr1 manual_curation CDS 35669052 35669149 . + 1 Parent=GSCOCT00016175001 | |
| 25363 chr1 manual_curation CDS 35668729 35668851 . + 1 Parent=GSCOCT00016175001 | |
| 25364 chr1 manual_curation CDS 35668066 35668204 . + 0 Parent=GSCOCT00016175001 | |
| 25365 chr1 manual_curation CDS 35667947 35667973 . + 0 Parent=GSCOCT00016175001 | |
| 25366 chr1 manual_curation gene 35673040 35677502 . + . ID=GSCOCG00016173001;Name=Cc01_g18670 | |
| 25367 chr1 manual_curation mRNA 35673040 35677502 . + . ID=GSCOCT00016173001;Parent=GSCOCG00016173001;Name=Cc01_g18670 | |
| 25368 chr1 manual_curation polypeptide 35673323 35676861 . + . ID=GSCOCP00016173001;Dbxref=InterPro:IPR011611,PFAM:PF00294,SwissProt:A2WXV8,SwissProt:Q0JGZ6,SwissProt:Q6XZ79,TAIR:AT1G06730.1,TAIR:AT1G66430.1,TAIR:AT3G59480.1,TrEMBL:B9H8I8,TrEMBL:B9S4U3,TrEMBL:D7SQM7;Derives_from=GSCOCT00016173001;Name=Cc01_g18670;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.7.1.4,PRODUCT:Putative Fructokinase-1,CC_functional_completeness:modules,CC_gene:FRK1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016173001~ Putative Fructokinase-1~ FRK1~ modules;original_location=complement(join(1577425..1577868%2C1576413..1576663%2C1575958..1576249%2C1575127..1575279%2C1574330..1574716));owner=coffea | |
| 25369 chr1 manual_curation exon 35676475 35677502 . + . Parent=GSCOCT00016173001 | |
| 25370 chr1 manual_curation exon 35675912 35676064 . + . Parent=GSCOCT00016173001 | |
| 25371 chr1 manual_curation exon 35674942 35675233 . + . Parent=GSCOCT00016173001 | |
| 25372 chr1 manual_curation exon 35674528 35674778 . + . Parent=GSCOCT00016173001 | |
| 25373 chr1 manual_curation exon 35673040 35673766 . + . Parent=GSCOCT00016173001 | |
| 25374 chr1 manual_curation CDS 35676475 35676861 . + 0 Parent=GSCOCT00016173001 | |
| 25375 chr1 manual_curation CDS 35675912 35676064 . + 0 Parent=GSCOCT00016173001 | |
| 25376 chr1 manual_curation CDS 35674942 35675233 . + 2 Parent=GSCOCT00016173001 | |
| 25377 chr1 manual_curation CDS 35674528 35674778 . + 0 Parent=GSCOCT00016173001 | |
| 25378 chr1 manual_curation CDS 35673323 35673766 . + 0 Parent=GSCOCT00016173001 | |
| 25379 chr1 manual_curation gene 35699936 35702971 . - . ID=GSCOCG00016170001;Name=Cc01_g18680 | |
| 25380 chr1 manual_curation mRNA 35699936 35702971 . - . ID=GSCOCT00016170001;Parent=GSCOCG00016170001;Name=Cc01_g18680 | |
| 25381 chr1 manual_curation polypeptide 35701148 35702971 . - . ID=GSCOCP00016170001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q6NQ83,SwissProt:Q9LQ14,SwissProt:Q9LQ16,TAIR:AT1G62910.1,TAIR:AT1G62930.1,TAIR:AT3G22470.1,TIGRFAMs:TIGR00756,TrEMBL:A5AHX3,TrEMBL:B9S4U2,TrEMBL:D7SQM4;Derives_from=GSCOCT00016170001;Name=Cc01_g18680;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Pentatricopeptide repeat-containing protein At3g22470%2C mitochondrial,CC_functional_completeness:complete,CC_gene:At3g22470,CC_gene:At1g62930,CC_gene:At1g62910;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016170001~ Putative Pentatricopeptide repeat-containing protein At3g22470%2C mitochondrial~ At3g22470~ complete;original_location=1548220..1550043;owner=coffea | |
| 25382 chr1 manual_curation exon 35699936 35702971 . - . Parent=GSCOCT00016170001 | |
| 25383 chr1 manual_curation CDS 35701148 35702971 . - 0 Parent=GSCOCT00016170001 | |
| 25384 chr1 manual_curation gene 35704525 35708134 . + . ID=GSCOCG00016169001;Name=Cc01_g18690 | |
| 25385 chr1 manual_curation mRNA 35704525 35708134 . + . ID=GSCOCT00016169001;Parent=GSCOCG00016169001;Name=Cc01_g18690 | |
| 25386 chr1 manual_curation polypeptide 35704525 35708134 . + . ID=GSCOCP00016169001;Dbxref=InterPro:IPR010488,PFAM:PF06414,TAIR:AT1G04280.1,TAIR:AT1G06750.2,TAIR:AT2G30630.2,TrEMBL:B9S4U1,TrEMBL:I1JF30,TrEMBL:I1L8B0;Derives_from=GSCOCT00016169001;Name=Cc01_g18690;Ontology_term=CC_evidence_code:ISS,GO:0001906,GO:0005524,CC_EC_number:missing_EC_number,PRODUCT:P-loop containing nucleoside triphosphate hydrolases superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016169001~ P-loop containing nucleoside triphosphate hydrolases superfamily protein~ unknown_gene~ complete;original_location=complement(join(1546561..1546666%2C1546210..1546433%2C1546012..1546073%2C1545384..1545605%2C1545060..1545186%2C1543864..1544183%2C1543480..1543624%2C1543057..1543296));owner=coffea | |
| 25387 chr1 manual_curation exon 35707895 35708134 . + . Parent=GSCOCT00016169001 | |
| 25388 chr1 manual_curation exon 35707567 35707711 . + . Parent=GSCOCT00016169001 | |
| 25389 chr1 manual_curation exon 35707008 35707327 . + . Parent=GSCOCT00016169001 | |
| 25390 chr1 manual_curation exon 35706005 35706131 . + . Parent=GSCOCT00016169001 | |
| 25391 chr1 manual_curation exon 35705586 35705807 . + . Parent=GSCOCT00016169001 | |
| 25392 chr1 manual_curation exon 35705118 35705179 . + . Parent=GSCOCT00016169001 | |
| 25393 chr1 manual_curation exon 35704758 35704981 . + . Parent=GSCOCT00016169001 | |
| 25394 chr1 manual_curation exon 35704525 35704630 . + . Parent=GSCOCT00016169001 | |
| 25395 chr1 manual_curation CDS 35707895 35708134 . + 0 Parent=GSCOCT00016169001 | |
| 25396 chr1 manual_curation CDS 35707567 35707711 . + 2 Parent=GSCOCT00016169001 | |
| 25397 chr1 manual_curation CDS 35707008 35707327 . + 0 Parent=GSCOCT00016169001 | |
| 25398 chr1 manual_curation CDS 35706005 35706131 . + 2 Parent=GSCOCT00016169001 | |
| 25399 chr1 manual_curation CDS 35705586 35705807 . + 2 Parent=GSCOCT00016169001 | |
| 25400 chr1 manual_curation CDS 35705118 35705179 . + 0 Parent=GSCOCT00016169001 | |
| 25401 chr1 manual_curation CDS 35704758 35704981 . + 1 Parent=GSCOCT00016169001 | |
| 25402 chr1 manual_curation CDS 35704525 35704630 . + 0 Parent=GSCOCT00016169001 | |
| 25403 chr1 manual_curation gene 35715725 35717392 . - . ID=GSCOCG00016166001;Name=Cc01_g18700 | |
| 25404 chr1 manual_curation mRNA 35715725 35717392 . - . ID=GSCOCT00016166001;Parent=GSCOCG00016166001;Name=Cc01_g18700 | |
| 25405 chr1 manual_curation polypeptide 35716158 35717236 . - . ID=GSCOCP00016166001;Dbxref=GENE3D:G3DSA:1.10.10.10,InterPro:IPR005818,InterPro:IPR005819,InterPro:IPR011991,PFAM:PF00538,PRINTS:PR00624,SMART:SM00526,SwissProt:P37218,SwissProt:P40267,SwissProt:Q9M5W4,TAIR:AT1G06760.1,TAIR:AT2G18050.1,TrEMBL:D7LC70,TrEMBL:O65820,TrEMBL:Q40509;Derives_from=GSCOCT00016166001;Name=Cc01_g18700;Ontology_term=CC_evidence_code:ISS,GO:0000786,GO:0003677,GO:0005634,GO:0006334,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016166001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=join(1533955..1534140%2C1534329..1535033);owner=coffea | |
| 25406 chr1 manual_curation exon 35717051 35717392 . - . Parent=GSCOCT00016166001 | |
| 25407 chr1 manual_curation exon 35715725 35716862 . - . Parent=GSCOCT00016166001 | |
| 25408 chr1 manual_curation CDS 35717051 35717236 . - 0 Parent=GSCOCT00016166001 | |
| 25409 chr1 manual_curation CDS 35716158 35716862 . - 0 Parent=GSCOCT00016166001 | |
| 25410 chr1 manual_curation gene 35726481 35727035 . + . ID=GSCOCG00016165001;Name=Cc01_g18710 | |
| 25411 chr1 manual_curation mRNA 35726481 35727035 . + . ID=GSCOCT00016165001;Parent=GSCOCG00016165001;Name=Cc01_g18710 | |
| 25412 chr1 manual_curation polypeptide 35726481 35727035 . + . ID=GSCOCP00016165001;Dbxref=GENE3D:G3DSA:3.30.730.10,InterPro:IPR001471,InterPro:IPR016177,PFAM:PF00847,PRINTS:PR00367,PROFILE:PS51032,SMART:SM00380,SUPERFAMILY:SSF54171,SwissProt:Q40477,SwissProt:Q94ID6,SwissProt:Q9LW49,TAIR:AT1G28360.1,TAIR:AT1G50640.1,TAIR:AT5G44210.1,TrEMBL:B9GS58,TrEMBL:B9H8I3,TrEMBL:F6GXM6;Derives_from=GSCOCT00016165001;Name=Cc01_g18710;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,CC_EC_number:missing_EC_number,PRODUCT:AP2/ERF domain-containing transcription factor,CC_functional_completeness:complete,CC_gene:ERF12,CC_gene:ERF4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016165001~ AP2/ERF domain-containing transcription factor~ ERF12~ complete;original_location=complement(1524156..1524710);owner=coffea | |
| 25413 chr1 manual_curation exon 35726481 35727035 . + . Parent=GSCOCT00016165001 | |
| 25414 chr1 manual_curation CDS 35726481 35727035 . + 0 Parent=GSCOCT00016165001 | |
| 25415 chr1 manual_curation gene 35732056 35732443 . - . ID=GSCOCG00016163001;Name=Cc01_g18720 | |
| 25416 chr1 manual_curation mRNA 35732056 35732443 . - . ID=GSCOCT00016163001;Parent=GSCOCG00016163001;Name=Cc01_g18720 | |
| 25417 chr1 manual_curation polypeptide 35732183 35732443 . - . ID=GSCOCP00016163001;Derives_from=GSCOCT00016163001;Name=Cc01_g18720;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016163001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(1518748..1518863%2C1518957..1519008);owner=coffea | |
| 25418 chr1 manual_curation exon 35732328 35732443 . - . Parent=GSCOCT00016163001 | |
| 25419 chr1 manual_curation exon 35732056 35732234 . - . Parent=GSCOCT00016163001 | |
| 25420 chr1 manual_curation CDS 35732328 35732443 . - 0 Parent=GSCOCT00016163001 | |
| 25421 chr1 manual_curation CDS 35732183 35732234 . - 2 Parent=GSCOCT00016163001 | |
| 25422 chr1 manual_curation gene 35732652 35735408 . - . ID=GSCOCG00016162001;Name=Cc01_g18730 | |
| 25423 chr1 manual_curation mRNA 35732652 35735408 . - . ID=GSCOCT00016162001;Parent=GSCOCG00016162001;Name=Cc01_g18730 | |
| 25424 chr1 manual_curation polypeptide 35733125 35734718 . - . ID=GSCOCP00016162001;Dbxref=InterPro:IPR003657,InterPro:IPR018872,PFAM:PF03106,PFAM:PF10533,PROFILE:PS50811,SMART:SM00774,SwissProt:O04336,SwissProt:Q93WU6,SwissProt:Q9SR07,TAIR:AT2G30590.1,TAIR:AT3G04670.1,TAIR:AT5G28650.1,TrEMBL:B9GS59,TrEMBL:B9S4T8,TrEMBL:D9ZJF9;Derives_from=GSCOCT00016162001;Name=Cc01_g18730;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0043565,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Probable WRKY transcription factor 21,CC_functional_completeness:complete,CC_gene:WRKY21,CC_gene:WRKY39,CC_gene:WRKY74;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016162001~ Probable WRKY transcription factor 21~ WRKY21~ complete;original_location=join(1516473..1517233%2C1517339..1517464%2C1517922..1518066);owner=coffea | |
| 25425 chr1 manual_curation exon 35733958 35735408 . - . Parent=GSCOCT00016162001 | |
| 25426 chr1 manual_curation exon 35733727 35733852 . - . Parent=GSCOCT00016162001 | |
| 25427 chr1 manual_curation exon 35732652 35733269 . - . Parent=GSCOCT00016162001 | |
| 25428 chr1 manual_curation CDS 35733958 35734718 . - 0 Parent=GSCOCT00016162001 | |
| 25429 chr1 manual_curation CDS 35733727 35733852 . - 2 Parent=GSCOCT00016162001 | |
| 25430 chr1 manual_curation CDS 35733125 35733269 . - 2 Parent=GSCOCT00016162001 | |
| 25431 chr1 manual_curation gene 35740403 35744200 . - . ID=GSCOCG00016161001;Name=Cc01_g18740 | |
| 25432 chr1 manual_curation mRNA 35740403 35744200 . - . ID=GSCOCT00016161001;Parent=GSCOCG00016161001;Name=Cc01_g18740 | |
| 25433 chr1 manual_curation polypeptide 35741233 35743987 . - . ID=GSCOCP00016161001;Dbxref=GENE3D:G3DSA:3.30.720.10,InterPro:IPR008832,InterPro:IPR009018,PANTHER:PTHR12834,PFAM:PF05486,PIR:PIRSF017029,SUPERFAMILY:SSF54762,SwissProt:O04438,SwissProt:Q55GL2,SwissProt:Q9SMU7,TAIR:AT3G49100.1,TrEMBL:D7LS39,TrEMBL:D7SQL9,TrEMBL:Q0WS60;Derives_from=GSCOCT00016161001;Name=Cc01_g18740;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0006614,GO:0008312,GO:0045900,GO:0048500,CC_EC_number:missing_EC_number,PRODUCT:Signal recognition particle 9 kDa protein,CC_functional_completeness:complete,CC_gene:SRP9,CC_gene:srp9;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016161001~ Signal recognition particle 9 kDa protein~ SRP9~ complete;original_location=join(1507204..1507275%2C1507378..1507446%2C1509460..1509553%2C1509882..1509958);owner=coffea | |
| 25434 chr1 manual_curation exon 35743916 35744200 . - . Parent=GSCOCT00016161001 | |
| 25435 chr1 manual_curation exon 35743745 35743813 . - . Parent=GSCOCT00016161001 | |
| 25436 chr1 manual_curation exon 35741638 35741731 . - . Parent=GSCOCT00016161001 | |
| 25437 chr1 manual_curation exon 35740403 35741309 . - . Parent=GSCOCT00016161001 | |
| 25438 chr1 manual_curation CDS 35743916 35743987 . - 0 Parent=GSCOCT00016161001 | |
| 25439 chr1 manual_curation CDS 35743745 35743813 . - 0 Parent=GSCOCT00016161001 | |
| 25440 chr1 manual_curation CDS 35741638 35741731 . - 0 Parent=GSCOCT00016161001 | |
| 25441 chr1 manual_curation CDS 35741233 35741309 . - 1 Parent=GSCOCT00016161001 | |
| 25442 chr1 manual_curation gene 35745941 35751156 . + . ID=GSCOCG00016160001;Name=Cc01_g18750 | |
| 25443 chr1 manual_curation mRNA 35745941 35751156 . + . ID=GSCOCT00016160001;Parent=GSCOCG00016160001;Name=Cc01_g18750 | |
| 25444 chr1 manual_curation polypeptide 35746247 35751156 . + . ID=GSCOCP00016160001;Dbxref=GENE3D:G3DSA:1.25.40.10,GENE3D:G3DSA:1.25.40.20,InterPro:IPR001440,InterPro:IPR002110,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR019734,InterPro:IPR020683,PFAM:PF00023,PFAM:PF00515,PROFILE:PS50005,PROFILE:PS50088,PROFILE:PS50293,PROFILE:PS50297,SMART:SM00028,SMART:SM00248,SUPERFAMILY:SSF48403,SwissProt:Q12955,SwissProt:Q5ZLC8,SwissProt:Q8UVC3,TAIR:AT1G62740.1,TAIR:AT3G04710.1,TAIR:AT4G12400.2,TrEMBL:B9I5G6,TrEMBL:B9SZ58,TrEMBL:D7TXE6;Derives_from=GSCOCT00016160001;Name=Cc01_g18750;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:3.1.1.4,PRODUCT:Putative Ankyrin-3,CC_functional_completeness:fragment,CC_gene:ANK3,CC_gene:INVS,CC_gene:ANKRD52;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016160001~ Putative Ankyrin-3~ ANK3~ fragment;original_location=complement(join(1504866..1504944%2C1504605..1504748%2C1504138..1504269%2C1503854..1503993%2C1502914..1503000%2C1502113..1502238%2C1501280..1501432%2C1500847..1500948%2C1500452..1500622%2C1500274..1500353%2C1500035..1500098));owner=coffea | |
| 25445 chr1 manual_curation exon 35751093 35751156 . + . Parent=GSCOCT00016160001 | |
| 25446 chr1 manual_curation exon 35750838 35750917 . + . Parent=GSCOCT00016160001 | |
| 25447 chr1 manual_curation exon 35750569 35750739 . + . Parent=GSCOCT00016160001 | |
| 25448 chr1 manual_curation exon 35750243 35750344 . + . Parent=GSCOCT00016160001 | |
| 25449 chr1 manual_curation exon 35749759 35749911 . + . Parent=GSCOCT00016160001 | |
| 25450 chr1 manual_curation exon 35748953 35749078 . + . Parent=GSCOCT00016160001 | |
| 25451 chr1 manual_curation exon 35748191 35748277 . + . Parent=GSCOCT00016160001 | |
| 25452 chr1 manual_curation exon 35747198 35747337 . + . Parent=GSCOCT00016160001 | |
| 25453 chr1 manual_curation exon 35746922 35747053 . + . Parent=GSCOCT00016160001 | |
| 25454 chr1 manual_curation exon 35746443 35746586 . + . Parent=GSCOCT00016160001 | |
| 25455 chr1 manual_curation exon 35745941 35746325 . + . Parent=GSCOCT00016160001 | |
| 25456 chr1 manual_curation CDS 35751093 35751156 . + 2 Parent=GSCOCT00016160001 | |
| 25457 chr1 manual_curation CDS 35750838 35750917 . + 0 Parent=GSCOCT00016160001 | |
| 25458 chr1 manual_curation CDS 35750569 35750739 . + 0 Parent=GSCOCT00016160001 | |
| 25459 chr1 manual_curation CDS 35750243 35750344 . + 0 Parent=GSCOCT00016160001 | |
| 25460 chr1 manual_curation CDS 35749759 35749911 . + 0 Parent=GSCOCT00016160001 | |
| 25461 chr1 manual_curation CDS 35748953 35749078 . + 0 Parent=GSCOCT00016160001 | |
| 25462 chr1 manual_curation CDS 35748191 35748277 . + 0 Parent=GSCOCT00016160001 | |
| 25463 chr1 manual_curation CDS 35747198 35747337 . + 1 Parent=GSCOCT00016160001 | |
| 25464 chr1 manual_curation CDS 35746922 35747053 . + 1 Parent=GSCOCT00016160001 | |
| 25465 chr1 manual_curation CDS 35746443 35746586 . + 1 Parent=GSCOCT00016160001 | |
| 25466 chr1 manual_curation CDS 35746247 35746325 . + 0 Parent=GSCOCT00016160001 | |
| 25467 chr1 manual_curation gene 35753866 35759986 . - . ID=GSCOCG00016158001;Name=Cc01_g18760 | |
| 25468 chr1 manual_curation mRNA 35753866 35759986 . - . ID=GSCOCT00016158001;Parent=GSCOCG00016158001;Name=Cc01_g18760 | |
| 25469 chr1 manual_curation polypeptide 35754369 35759218 . - . ID=GSCOCP00016158001;Dbxref=InterPro:IPR001841,InterPro:IPR017907,PROFILE:PS50089,PROSITE:PS00518,SMART:SM00184,SwissProt:Q94AY3,SwissProt:Q9LS86,SwissProt:Q9M9Y4,TAIR:AT1G06770.1,TAIR:AT2G30580.1,TAIR:AT3G23060.1,TrEMBL:D7SQL7,TrEMBL:I1JP01,TrEMBL:I1N9N3;Derives_from=GSCOCT00016158001;Name=Cc01_g18760;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:E3 ubiquitin protein ligase DRIP2,CC_functional_completeness:complete,CC_gene:DRIP2,CC_gene:DRIP1,CC_gene:At3g23060;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016158001~ E3 ubiquitin protein ligase DRIP2~ DRIP2~ complete;original_location=join(1491973..1492087%2C1492959..1493058%2C1493998..1494325%2C1494454..1494902%2C1495002..1495052%2C1496291..1496363%2C1496652..1496822);owner=coffea | |
| 25470 chr1 manual_curation exon 35759689 35759986 . - . Parent=GSCOCT00016158001 | |
| 25471 chr1 manual_curation exon 35759104 35759496 . - . Parent=GSCOCT00016158001 | |
| 25472 chr1 manual_curation exon 35758133 35758232 . - . Parent=GSCOCT00016158001 | |
| 25473 chr1 manual_curation exon 35756866 35757193 . - . Parent=GSCOCT00016158001 | |
| 25474 chr1 manual_curation exon 35756289 35756737 . - . Parent=GSCOCT00016158001 | |
| 25475 chr1 manual_curation exon 35756139 35756189 . - . Parent=GSCOCT00016158001 | |
| 25476 chr1 manual_curation exon 35754828 35754900 . - . Parent=GSCOCT00016158001 | |
| 25477 chr1 manual_curation exon 35753866 35754539 . - . Parent=GSCOCT00016158001 | |
| 25478 chr1 manual_curation CDS 35759104 35759218 . - 0 Parent=GSCOCT00016158001 | |
| 25479 chr1 manual_curation CDS 35758133 35758232 . - 1 Parent=GSCOCT00016158001 | |
| 25480 chr1 manual_curation CDS 35756866 35757193 . - 2 Parent=GSCOCT00016158001 | |
| 25481 chr1 manual_curation CDS 35756289 35756737 . - 0 Parent=GSCOCT00016158001 | |
| 25482 chr1 manual_curation CDS 35756139 35756189 . - 2 Parent=GSCOCT00016158001 | |
| 25483 chr1 manual_curation CDS 35754828 35754900 . - 2 Parent=GSCOCT00016158001 | |
| 25484 chr1 manual_curation CDS 35754369 35754539 . - 0 Parent=GSCOCT00016158001 | |
| 25485 chr1 manual_curation gene 35763953 35767824 . - . ID=GSCOCG00016157001;Name=Cc01_g18770 | |
| 25486 chr1 manual_curation mRNA 35763953 35767824 . - . ID=GSCOCT00016157001;Parent=GSCOCG00016157001;Name=Cc01_g18770 | |
| 25487 chr1 manual_curation polypeptide 35764263 35767586 . - . ID=GSCOCP00016157001;Dbxref=InterPro:IPR002523,PFAM:PF01544,SwissProt:B8AJT9,SwissProt:Q10D38,SwissProt:Q9FLG2,TAIR:AT1G16010.2,TAIR:AT5G09690.2,TAIR:AT5G64560.1,TrEMBL:B9HKE1,TrEMBL:B9S4T3,TrEMBL:D7T789;Derives_from=GSCOCT00016157001;Name=Cc01_g18770;Ontology_term=CC_evidence_code:ISS,GO:0016020,GO:0030001,GO:0046873,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Magnesium transporter MRS2-I,CC_functional_completeness:complete,CC_gene:MRS2-I,CC_gene:MRS2-2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016157001~ Magnesium transporter MRS2-I~ MRS2-I~ complete;original_location=join(1483605..1483841%2C1483983..1484012%2C1484315..1484462%2C1484696..1484817%2C1485269..1485343%2C1485746..1485979%2C1486074..1486118%2C1486329..1486373%2C1486499..1486528%2C1486615..1486734%2C1486842..1486928);owner=coffea | |
| 25488 chr1 manual_curation exon 35767350 35767824 . - . Parent=GSCOCT00016157001 | |
| 25489 chr1 manual_curation exon 35767179 35767208 . - . Parent=GSCOCT00016157001 | |
| 25490 chr1 manual_curation exon 35766729 35766876 . - . Parent=GSCOCT00016157001 | |
| 25491 chr1 manual_curation exon 35766374 35766495 . - . Parent=GSCOCT00016157001 | |
| 25492 chr1 manual_curation exon 35765848 35765922 . - . Parent=GSCOCT00016157001 | |
| 25493 chr1 manual_curation exon 35765212 35765445 . - . Parent=GSCOCT00016157001 | |
| 25494 chr1 manual_curation exon 35765073 35765117 . - . Parent=GSCOCT00016157001 | |
| 25495 chr1 manual_curation exon 35764818 35764862 . - . Parent=GSCOCT00016157001 | |
| 25496 chr1 manual_curation exon 35764663 35764692 . - . Parent=GSCOCT00016157001 | |
| 25497 chr1 manual_curation exon 35764457 35764576 . - . Parent=GSCOCT00016157001 | |
| 25498 chr1 manual_curation exon 35763953 35764349 . - . Parent=GSCOCT00016157001 | |
| 25499 chr1 manual_curation CDS 35767350 35767586 . - 0 Parent=GSCOCT00016157001 | |
| 25500 chr1 manual_curation CDS 35767179 35767208 . - 0 Parent=GSCOCT00016157001 | |
| 25501 chr1 manual_curation CDS 35766729 35766876 . - 0 Parent=GSCOCT00016157001 | |
| 25502 chr1 manual_curation CDS 35766374 35766495 . - 1 Parent=GSCOCT00016157001 | |
| 25503 chr1 manual_curation CDS 35765848 35765922 . - 0 Parent=GSCOCT00016157001 | |
| 25504 chr1 manual_curation CDS 35765212 35765445 . - 0 Parent=GSCOCT00016157001 | |
| 25505 chr1 manual_curation CDS 35765073 35765117 . - 0 Parent=GSCOCT00016157001 | |
| 25506 chr1 manual_curation CDS 35764818 35764862 . - 0 Parent=GSCOCT00016157001 | |
| 25507 chr1 manual_curation CDS 35764663 35764692 . - 0 Parent=GSCOCT00016157001 | |
| 25508 chr1 manual_curation CDS 35764457 35764576 . - 0 Parent=GSCOCT00016157001 | |
| 25509 chr1 manual_curation CDS 35764263 35764349 . - 0 Parent=GSCOCT00016157001 | |
| 25510 chr1 manual_curation gene 35773366 35779015 . + . ID=GSCOCG00016156001;Name=Cc01_g18780 | |
| 25511 chr1 manual_curation mRNA 35773366 35779015 . + . ID=GSCOCT00016156001;Parent=GSCOCG00016156001;Name=Cc01_g18780 | |
| 25512 chr1 manual_curation polypeptide 35773597 35778695 . + . ID=GSCOCP00016156001;Dbxref=InterPro:IPR002495,PFAM:PF01501,SwissProt:Q8RXE1,SwissProt:Q93ZX7,SwissProt:Q9M9Y5,TAIR:AT1G06780.2,TAIR:AT2G30575.1,TAIR:AT5G47780.1,TrEMBL:B9H8H7,TrEMBL:B9S4T2,TrEMBL:D7SQL4;Derives_from=GSCOCT00016156001;Name=Cc01_g18780;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Probable galacturonosyltransferase 6,CC_functional_completeness:complete,CC_gene:GAUT6,CC_gene:GAUT5,CC_gene:GAUT4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016156001~ Probable galacturonosyltransferase 6~ GAUT6~ complete;original_location=complement(join(1477483..1477594%2C1477333..1477364%2C1476742..1476783%2C1476492..1476642%2C1476329..1476396%2C1475165..1475397%2C1474286..1474643%2C1473148..1473669%2C1472496..1472771));owner=coffea | |
| 25513 chr1 manual_curation exon 35778420 35779015 . + . Parent=GSCOCT00016156001 | |
| 25514 chr1 manual_curation exon 35777522 35778043 . + . Parent=GSCOCT00016156001 | |
| 25515 chr1 manual_curation exon 35776548 35776905 . + . Parent=GSCOCT00016156001 | |
| 25516 chr1 manual_curation exon 35775794 35776026 . + . Parent=GSCOCT00016156001 | |
| 25517 chr1 manual_curation exon 35774795 35774862 . + . Parent=GSCOCT00016156001 | |
| 25518 chr1 manual_curation exon 35774549 35774699 . + . Parent=GSCOCT00016156001 | |
| 25519 chr1 manual_curation exon 35774408 35774449 . + . Parent=GSCOCT00016156001 | |
| 25520 chr1 manual_curation exon 35773827 35773858 . + . Parent=GSCOCT00016156001 | |
| 25521 chr1 manual_curation exon 35773366 35773708 . + . Parent=GSCOCT00016156001 | |
| 25522 chr1 manual_curation CDS 35778420 35778695 . + 0 Parent=GSCOCT00016156001 | |
| 25523 chr1 manual_curation CDS 35777522 35778043 . + 0 Parent=GSCOCT00016156001 | |
| 25524 chr1 manual_curation CDS 35776548 35776905 . + 2 Parent=GSCOCT00016156001 | |
| 25525 chr1 manual_curation CDS 35775794 35776026 . + 0 Parent=GSCOCT00016156001 | |
| 25526 chr1 manual_curation CDS 35774795 35774862 . + 1 Parent=GSCOCT00016156001 | |
| 25527 chr1 manual_curation CDS 35774549 35774699 . + 0 Parent=GSCOCT00016156001 | |
| 25528 chr1 manual_curation CDS 35774408 35774449 . + 0 Parent=GSCOCT00016156001 | |
| 25529 chr1 manual_curation CDS 35773827 35773858 . + 1 Parent=GSCOCT00016156001 | |
| 25530 chr1 manual_curation CDS 35773597 35773708 . + 0 Parent=GSCOCT00016156001 | |
| 25531 chr1 manual_curation gene 35779590 35780020 . + . ID=GSCOCG00016155001;Name=Cc01_g18790 | |
| 25532 chr1 manual_curation mRNA 35779590 35780020 . + . ID=GSCOCT00016155001;Parent=GSCOCG00016155001;Name=Cc01_g18790 | |
| 25533 chr1 manual_curation polypeptide 35779701 35780020 . + . ID=GSCOCP00016155001;Derives_from=GSCOCT00016155001;Name=Cc01_g18790;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016155001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1471362..1471490%2C1471171..1471230));owner=coffea | |
| 25534 chr1 manual_curation exon 35779961 35780020 . + . Parent=GSCOCT00016155001 | |
| 25535 chr1 manual_curation exon 35779590 35779829 . + . Parent=GSCOCT00016155001 | |
| 25536 chr1 manual_curation CDS 35779961 35780020 . + 0 Parent=GSCOCT00016155001 | |
| 25537 chr1 manual_curation CDS 35779701 35779829 . + 0 Parent=GSCOCT00016155001 | |
| 25538 chr1 manual_curation gene 35780075 35781083 . + . ID=GSCOCG00016154001;Name=Cc01_g18800 | |
| 25539 chr1 manual_curation mRNA 35780075 35781083 . + . ID=GSCOCT00016154001;Parent=GSCOCG00016154001;Name=Cc01_g18800 | |
| 25540 chr1 manual_curation polypeptide 35780147 35780878 . + . ID=GSCOCP00016154001;Dbxref=InterPro:IPR009806,PFAM:PF07123,SwissProt:Q39194,SwissProt:Q41387,SwissProt:Q5ZBY9,TAIR:AT2G30570.1,TrEMBL:A9PJA9,TrEMBL:B9GS65,TrEMBL:D7SQL3;Derives_from=GSCOCT00016154001;Name=Cc01_g18800;Ontology_term=CC_evidence_code:ISS,GO:0009507,GO:0009523,CC_EC_number:missing_EC_number,PRODUCT:Photosystem II reaction center W protein%2C chloroplastic,CC_functional_completeness:complete,CC_gene:PSBW,CC_gene:psbW;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016154001~ Photosystem II reaction center W protein%2C chloroplastic~ PSBW~ complete;original_location=complement(join(1470951..1471044%2C1470313..1470623));owner=coffea | |
| 25541 chr1 manual_curation exon 35780568 35781083 . + . Parent=GSCOCT00016154001 | |
| 25542 chr1 manual_curation exon 35780075 35780240 . + . Parent=GSCOCT00016154001 | |
| 25543 chr1 manual_curation CDS 35780568 35780878 . + 1 Parent=GSCOCT00016154001 | |
| 25544 chr1 manual_curation CDS 35780147 35780240 . + 0 Parent=GSCOCT00016154001 | |
| 25545 chr1 manual_curation gene 35783675 35786471 . + . ID=GSCOCG00016151001;Name=Cc01_g18810 | |
| 25546 chr1 manual_curation mRNA 35783675 35786471 . + . ID=GSCOCT00016151001;Parent=GSCOCG00016151001;Name=Cc01_g18810 | |
| 25547 chr1 manual_curation polypeptide 35784404 35786256 . + . ID=GSCOCP00016151001;Dbxref=InterPro:IPR005576,InterPro:IPR013238,PFAM:PF03876,PFAM:PF08292,SwissProt:Q2T9X1,SwissProt:Q9D2C6,SwissProt:Q9Y535,TAIR:AT1G06790.1,TrEMBL:D7KG66,TrEMBL:D7TPA5,TrEMBL:Q9M9Y6;Derives_from=GSCOCT00016151001;Name=Cc01_g18810;Ontology_term=CC_evidence_code:ISS,GO:0003899,GO:0006350,CC_EC_number:missing_EC_number,PRODUCT:Putative DNA-directed RNA polymerase III subunit RPC8,CC_functional_completeness:complete,CC_gene:POLR3H,CC_gene:Polr3h;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016151001~ Putative DNA-directed RNA polymerase III subunit RPC8~ POLR3H~ complete;original_location=complement(join(1466677..1466787%2C1466446..1466541%2C1466082..1466169%2C1465539..1465623%2C1465360..1465423%2C1465178..1465267%2C1464935..1464982));owner=coffea | |
| 25548 chr1 manual_curation exon 35783675 35783885 . + . Parent=GSCOCT00016151001 | |
| 25549 chr1 manual_curation exon 35786209 35786471 . + . Parent=GSCOCT00016151001 | |
| 25550 chr1 manual_curation exon 35785924 35786013 . + . Parent=GSCOCT00016151001 | |
| 25551 chr1 manual_curation exon 35785768 35785831 . + . Parent=GSCOCT00016151001 | |
| 25552 chr1 manual_curation exon 35785568 35785652 . + . Parent=GSCOCT00016151001 | |
| 25553 chr1 manual_curation exon 35785022 35785109 . + . Parent=GSCOCT00016151001 | |
| 25554 chr1 manual_curation exon 35784650 35784745 . + . Parent=GSCOCT00016151001 | |
| 25555 chr1 manual_curation exon 35784374 35784514 . + . Parent=GSCOCT00016151001 | |
| 25556 chr1 manual_curation CDS 35786209 35786256 . + 0 Parent=GSCOCT00016151001 | |
| 25557 chr1 manual_curation CDS 35785924 35786013 . + 0 Parent=GSCOCT00016151001 | |
| 25558 chr1 manual_curation CDS 35785768 35785831 . + 2 Parent=GSCOCT00016151001 | |
| 25559 chr1 manual_curation CDS 35785568 35785652 . + 1 Parent=GSCOCT00016151001 | |
| 25560 chr1 manual_curation CDS 35785022 35785109 . + 0 Parent=GSCOCT00016151001 | |
| 25561 chr1 manual_curation CDS 35784650 35784745 . + 0 Parent=GSCOCT00016151001 | |
| 25562 chr1 manual_curation CDS 35784404 35784514 . + 0 Parent=GSCOCT00016151001 | |
| 25563 chr1 manual_curation gene 35787978 35793036 . + . ID=GSCOCG00016150001;Name=Cc01_g18820 | |
| 25564 chr1 manual_curation mRNA 35787978 35793036 . + . ID=GSCOCT00016150001;Parent=GSCOCG00016150001;Name=Cc01_g18820 | |
| 25565 chr1 manual_curation polypeptide 35787978 35791577 . + . ID=GSCOCP00016150001;Dbxref=GENE3D:G3DSA:3.30.390.30,InterPro:IPR000815,InterPro:IPR001327,InterPro:IPR004099,InterPro:IPR006324,InterPro:IPR012999,InterPro:IPR013027,InterPro:IPR016156,PFAM:PF00070,PFAM:PF02852,PFAM:PF07992,PRINTS:PR00368,PRINTS:PR00945,PROSITE:PS00076,SUPERFAMILY:SSF55424,SwissProt:P27456,SwissProt:P42770,SwissProt:P80461,TAIR:AT3G16950.2,TAIR:AT3G24170.1,TAIR:AT3G54660.1,TIGRFAMs:TIGR01424,TrEMBL:B8PWQ9,TrEMBL:B9S4S9,TrEMBL:D7SQK6;Derives_from=GSCOCT00016150001;Name=Cc01_g18820;Ontology_term=CC_evidence_code:ISS,GO:0004362,GO:0005737,GO:0006749,GO:0016491,GO:0045454,GO:0050660,GO:0050661,GO:0055114,CC_EC_number:1.8.1.7,CC_EC_number:1.8.1.7,PRODUCT:Glutathione reductase%2C chloroplastic (Fragment),CC_functional_completeness:complete,CC_gene:GOR,CC_gene:GR,CC_gene:EMB2360;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016150001~ Glutathione reductase%2C chloroplastic (Fragment)~ GOR~ complete;original_location=complement(join(1462837..1463213%2C1462307..1462532%2C1461915..1462193%2C1461643..1461819%2C1461313..1461366%2C1461073..1461221%2C1460848..1460911%2C1460606..1460776%2C1460375..1460509%2C1459614..1459655));owner=coffea | |
| 25566 chr1 manual_curation exon 35791536 35793036 . + . Parent=GSCOCT00016150001 | |
| 25567 chr1 manual_curation exon 35790682 35790816 . + . Parent=GSCOCT00016150001 | |
| 25568 chr1 manual_curation exon 35790415 35790585 . + . Parent=GSCOCT00016150001 | |
| 25569 chr1 manual_curation exon 35790280 35790343 . + . Parent=GSCOCT00016150001 | |
| 25570 chr1 manual_curation exon 35789970 35790118 . + . Parent=GSCOCT00016150001 | |
| 25571 chr1 manual_curation exon 35789825 35789878 . + . Parent=GSCOCT00016150001 | |
| 25572 chr1 manual_curation exon 35789372 35789548 . + . Parent=GSCOCT00016150001 | |
| 25573 chr1 manual_curation exon 35788998 35789276 . + . Parent=GSCOCT00016150001 | |
| 25574 chr1 manual_curation exon 35788659 35788884 . + . Parent=GSCOCT00016150001 | |
| 25575 chr1 manual_curation exon 35787978 35788354 . + . Parent=GSCOCT00016150001 | |
| 25576 chr1 manual_curation CDS 35791536 35791577 . + 0 Parent=GSCOCT00016150001 | |
| 25577 chr1 manual_curation CDS 35790682 35790816 . + 0 Parent=GSCOCT00016150001 | |
| 25578 chr1 manual_curation CDS 35790415 35790585 . + 0 Parent=GSCOCT00016150001 | |
| 25579 chr1 manual_curation CDS 35790280 35790343 . + 2 Parent=GSCOCT00016150001 | |
| 25580 chr1 manual_curation CDS 35789970 35790118 . + 0 Parent=GSCOCT00016150001 | |
| 25581 chr1 manual_curation CDS 35789825 35789878 . + 0 Parent=GSCOCT00016150001 | |
| 25582 chr1 manual_curation CDS 35789372 35789548 . + 0 Parent=GSCOCT00016150001 | |
| 25583 chr1 manual_curation CDS 35788998 35789276 . + 0 Parent=GSCOCT00016150001 | |
| 25584 chr1 manual_curation CDS 35788659 35788884 . + 2 Parent=GSCOCT00016150001 | |
| 25585 chr1 manual_curation CDS 35787978 35788354 . + 0 Parent=GSCOCT00016150001 | |
| 25586 chr1 manual_curation gene 35793267 35796223 . - . ID=GSCOCG00016149001;Name=Cc01_g18830 | |
| 25587 chr1 manual_curation mRNA 35793267 35796223 . - . ID=GSCOCT00016149001;Parent=GSCOCG00016149001;Name=Cc01_g18830 | |
| 25588 chr1 manual_curation polypeptide 35793618 35795715 . - . ID=GSCOCP00016149001;Dbxref=InterPro:IPR002921,PFAM:PF01764,SwissProt:Q3EBR6,SwissProt:Q941F1,SwissProt:Q9C8J6,TAIR:AT1G06800.1,TAIR:AT1G51440.1,TAIR:AT2G30550.2,TrEMBL:A5B131,TrEMBL:B9GS68,TrEMBL:B9H8H3;Derives_from=GSCOCT00016149001;Name=Cc01_g18830;Ontology_term=CC_evidence_code:ISS,GO:0004806,GO:0006629,CC_EC_number:missing_EC_number,PRODUCT:Phospholipase A1-Igamma2%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:At2g30550,CC_gene:At1g06800,CC_gene:At1g51440;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016149001~ Phospholipase A1-Igamma2%2C chloroplastic~ At2g30550~ fragment;original_location=join(1455476..1456464%2C1457363..1457573);owner=coffea | |
| 25589 chr1 manual_curation exon 35794727 35796223 . - . Parent=GSCOCT00016149001 | |
| 25590 chr1 manual_curation exon 35793267 35793828 . - . Parent=GSCOCT00016149001 | |
| 25591 chr1 manual_curation CDS 35794727 35795715 . - 0 Parent=GSCOCT00016149001 | |
| 25592 chr1 manual_curation CDS 35793618 35793828 . - 2 Parent=GSCOCT00016149001 | |
| 25593 chr1 manual_curation gene 35814408 35818484 . + . ID=GSCOCG00016147001;Name=Cc01_g18840 | |
| 25594 chr1 manual_curation mRNA 35814408 35818484 . + . ID=GSCOCT00016147001;Parent=GSCOCG00016147001;Name=Cc01_g18840 | |
| 25595 chr1 manual_curation polypeptide 35814408 35818200 . + . ID=GSCOCP00016147001;Dbxref=InterPro:IPR001810,InterPro:IPR022364,PFAM:PF00646,PROFILE:PS50181,SUPERFAMILY:SSF81383,SwissProt:Q8W104,TAIR:AT3G54650.1,TrEMBL:B9GS69,TrEMBL:B9S4S5,TrEMBL:D7SQK3;Derives_from=GSCOCT00016147001;Name=Cc01_g18840;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:F-box/LRR-repeat protein 17,CC_functional_completeness:complete,CC_gene:FBL17;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016147001~ F-box/LRR-repeat protein 17~ FBL17~ complete;original_location=complement(join(1436125..1436783%2C1435701..1435802%2C1435116..1435260%2C1434815..1434999%2C1434547..1434651%2C1434282..1434379%2C1433967..1434187%2C1433814..1433880%2C1433643..1433728%2C1433332..1433427%2C1432991..1433059));owner=coffea | |
| 25596 chr1 manual_curation exon 35818132 35818484 . + . Parent=GSCOCT00016147001 | |
| 25597 chr1 manual_curation exon 35817764 35817859 . + . Parent=GSCOCT00016147001 | |
| 25598 chr1 manual_curation exon 35817463 35817548 . + . Parent=GSCOCT00016147001 | |
| 25599 chr1 manual_curation exon 35817311 35817377 . + . Parent=GSCOCT00016147001 | |
| 25600 chr1 manual_curation exon 35817004 35817224 . + . Parent=GSCOCT00016147001 | |
| 25601 chr1 manual_curation exon 35816812 35816909 . + . Parent=GSCOCT00016147001 | |
| 25602 chr1 manual_curation exon 35816540 35816644 . + . Parent=GSCOCT00016147001 | |
| 25603 chr1 manual_curation exon 35816192 35816376 . + . Parent=GSCOCT00016147001 | |
| 25604 chr1 manual_curation exon 35815931 35816075 . + . Parent=GSCOCT00016147001 | |
| 25605 chr1 manual_curation exon 35815389 35815490 . + . Parent=GSCOCT00016147001 | |
| 25606 chr1 manual_curation exon 35814408 35815066 . + . Parent=GSCOCT00016147001 | |
| 25607 chr1 manual_curation CDS 35818132 35818200 . + 0 Parent=GSCOCT00016147001 | |
| 25608 chr1 manual_curation CDS 35817764 35817859 . + 0 Parent=GSCOCT00016147001 | |
| 25609 chr1 manual_curation CDS 35817463 35817548 . + 1 Parent=GSCOCT00016147001 | |
| 25610 chr1 manual_curation CDS 35817311 35817377 . + 0 Parent=GSCOCT00016147001 | |
| 25611 chr1 manual_curation CDS 35817004 35817224 . + 1 Parent=GSCOCT00016147001 | |
| 25612 chr1 manual_curation CDS 35816812 35816909 . + 2 Parent=GSCOCT00016147001 | |
| 25613 chr1 manual_curation CDS 35816540 35816644 . + 2 Parent=GSCOCT00016147001 | |
| 25614 chr1 manual_curation CDS 35816192 35816376 . + 0 Parent=GSCOCT00016147001 | |
| 25615 chr1 manual_curation CDS 35815931 35816075 . + 2 Parent=GSCOCT00016147001 | |
| 25616 chr1 manual_curation CDS 35815389 35815490 . + 2 Parent=GSCOCT00016147001 | |
| 25617 chr1 manual_curation CDS 35814408 35815066 . + 0 Parent=GSCOCT00016147001 | |
| 25618 chr1 manual_curation gene 35819267 35824676 . + . ID=GSCOCG00016146001;Name=Cc01_g18850 | |
| 25619 chr1 manual_curation mRNA 35819267 35824676 . + . ID=GSCOCT00016146001;Parent=GSCOCG00016146001;Name=Cc01_g18850 | |
| 25620 chr1 manual_curation polypeptide 35819473 35824431 . + . ID=GSCOCP00016146001;Dbxref=InterPro:IPR000764,InterPro:IPR006083,PANTHER:PTHR10285:SF6,PFAM:PF00485,SwissProt:C5DXG0,SwissProt:P11664,SwissProt:Q9UTC5,TAIR:AT1G03030.1,TrEMBL:B9H8H5,TrEMBL:B9S4S4,TrEMBL:D7SQK2;Derives_from=GSCOCT00016146001;Name=Cc01_g18850;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0008152,GO:0016301,CC_EC_number:2.7.1.48,PRODUCT:Putative uridine kinase C227.14,CC_functional_completeness:modules,CC_gene:SPAC227.14,CC_gene:yggC,CC_gene:YFH7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016146001~ Putative uridine kinase C227.14~ SPAC227.14~ modules;original_location=complement(join(1431637..1431718%2C1431260..1431396%2C1431121..1431164%2C1430427..1430504%2C1429365..1429557%2C1428817..1428847%2C1428118..1428176%2C1427906..1427979%2C1427506..1427592%2C1427114..1427175%2C1426946..1426974%2C1426760..1426852));owner=coffea | |
| 25621 chr1 manual_curation exon 35824339 35824676 . + . Parent=GSCOCT00016146001 | |
| 25622 chr1 manual_curation exon 35824217 35824245 . + . Parent=GSCOCT00016146001 | |
| 25623 chr1 manual_curation exon 35824016 35824077 . + . Parent=GSCOCT00016146001 | |
| 25624 chr1 manual_curation exon 35823599 35823685 . + . Parent=GSCOCT00016146001 | |
| 25625 chr1 manual_curation exon 35823212 35823285 . + . Parent=GSCOCT00016146001 | |
| 25626 chr1 manual_curation exon 35823015 35823073 . + . Parent=GSCOCT00016146001 | |
| 25627 chr1 manual_curation exon 35822344 35822374 . + . Parent=GSCOCT00016146001 | |
| 25628 chr1 manual_curation exon 35821634 35821826 . + . Parent=GSCOCT00016146001 | |
| 25629 chr1 manual_curation exon 35820687 35820764 . + . Parent=GSCOCT00016146001 | |
| 25630 chr1 manual_curation exon 35820027 35820070 . + . Parent=GSCOCT00016146001 | |
| 25631 chr1 manual_curation exon 35819795 35819931 . + . Parent=GSCOCT00016146001 | |
| 25632 chr1 manual_curation exon 35819267 35819554 . + . Parent=GSCOCT00016146001 | |
| 25633 chr1 manual_curation CDS 35824339 35824431 . + 0 Parent=GSCOCT00016146001 | |
| 25634 chr1 manual_curation CDS 35824217 35824245 . + 1 Parent=GSCOCT00016146001 | |
| 25635 chr1 manual_curation CDS 35824016 35824077 . + 2 Parent=GSCOCT00016146001 | |
| 25636 chr1 manual_curation CDS 35823599 35823685 . + 2 Parent=GSCOCT00016146001 | |
| 25637 chr1 manual_curation CDS 35823212 35823285 . + 0 Parent=GSCOCT00016146001 | |
| 25638 chr1 manual_curation CDS 35823015 35823073 . + 1 Parent=GSCOCT00016146001 | |
| 25639 chr1 manual_curation CDS 35822344 35822374 . + 0 Parent=GSCOCT00016146001 | |
| 25640 chr1 manual_curation CDS 35821634 35821826 . + 2 Parent=GSCOCT00016146001 | |
| 25641 chr1 manual_curation CDS 35820687 35820764 . + 2 Parent=GSCOCT00016146001 | |
| 25642 chr1 manual_curation CDS 35820027 35820070 . + 0 Parent=GSCOCT00016146001 | |
| 25643 chr1 manual_curation CDS 35819795 35819931 . + 1 Parent=GSCOCT00016146001 | |
| 25644 chr1 manual_curation CDS 35819473 35819554 . + 0 Parent=GSCOCT00016146001 | |
| 25645 chr1 manual_curation gene 35836494 35837118 . + . ID=GSCOCG00016144001;Name=Cc01_g18860 | |
| 25646 chr1 manual_curation mRNA 35836494 35837118 . + . ID=GSCOCT00016144001;Parent=GSCOCG00016144001;Name=Cc01_g18860 | |
| 25647 chr1 manual_curation polypeptide 35836494 35837045 . + . ID=GSCOCP00016144001;Dbxref=InterPro:IPR003311,InterPro:IPR011525,PFAM:PF02309,PROFILE:PS50962,SwissProt:O24542,SwissProt:O24543,SwissProt:P49679,TAIR:AT1G04240.1,TAIR:AT4G14560.1,TAIR:AT5G43700.1,TrEMBL:C6T944,TrEMBL:G9HPV4,TrEMBL:I1JF49;Derives_from=GSCOCT00016144001;Name=Cc01_g18860;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0045449,GO:0046983,CC_EC_number:missing_EC_number,PRODUCT:Auxin-induced protein 22D,CC_functional_completeness:fragment,CC_gene:AUX22D,CC_gene:AUX22E,CC_gene:IAA4/5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016144001~ Auxin-induced protein 22D~ AUX22D~ fragment;original_location=complement(join(1414580..1414697%2C1414146..1414318));owner=coffea | |
| 25648 chr1 manual_curation exon 35836873 35837118 . + . Parent=GSCOCT00016144001 | |
| 25649 chr1 manual_curation exon 35836494 35836611 . + . Parent=GSCOCT00016144001 | |
| 25650 chr1 manual_curation CDS 35836873 35837045 . + 1 Parent=GSCOCT00016144001 | |
| 25651 chr1 manual_curation CDS 35836494 35836611 . + 0 Parent=GSCOCT00016144001 | |
| 25652 chr1 manual_curation gene 35837933 35841526 . + . ID=GSCOCG00016143001;Name=Cc01_g18870 | |
| 25653 chr1 manual_curation mRNA 35837933 35841526 . + . ID=GSCOCT00016143001;Parent=GSCOCG00016143001;Name=Cc01_g18870 | |
| 25654 chr1 manual_curation polypeptide 35838108 35841216 . + . ID=GSCOCP00016143001;Dbxref=GENE3D:G3DSA:3.40.30.10,InterPro:IPR002023,InterPro:IPR012335,InterPro:IPR012336,PANTHER:PTHR10371,PFAM:PF01257,PROSITE:PS01099,SUPERFAMILY:SSF52833,SwissProt:O22769,SwissProt:P04394,SwissProt:Q0MQI7,TAIR:AT4G02580.1,TIGRFAMs:TIGR01958,TrEMBL:B9GS73,TrEMBL:B9S4S0,TrEMBL:D7SQJ8;Derives_from=GSCOCT00016143001;Name=Cc01_g18870;Ontology_term=CC_evidence_code:ISS,GO:0016491,GO:0051287,GO:0055114,CC_EC_number:1.6.99.3,PRODUCT:NADH dehydrogenase [ubiquinone] flavoprotein 2%2C mitochondrial,CC_functional_completeness:complete,CC_gene:At4g02580,CC_gene:NDUFV2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016143001~ NADH dehydrogenase [ubiquinone] flavoprotein 2%2C mitochondrial~ At4g02580~ complete;original_location=complement(join(1413018..1413083%2C1412867..1412899%2C1412692..1412757%2C1411989..1412105%2C1411257..1411334%2C1411058..1411163%2C1410909..1410955%2C1410353..1410430%2C1410168..1410233%2C1409975..1410082));owner=coffea | |
| 25655 chr1 manual_curation exon 35841109 35841526 . + . Parent=GSCOCT00016143001 | |
| 25656 chr1 manual_curation exon 35840958 35841023 . + . Parent=GSCOCT00016143001 | |
| 25657 chr1 manual_curation exon 35840761 35840838 . + . Parent=GSCOCT00016143001 | |
| 25658 chr1 manual_curation exon 35840236 35840282 . + . Parent=GSCOCT00016143001 | |
| 25659 chr1 manual_curation exon 35840028 35840133 . + . Parent=GSCOCT00016143001 | |
| 25660 chr1 manual_curation exon 35839857 35839934 . + . Parent=GSCOCT00016143001 | |
| 25661 chr1 manual_curation exon 35839086 35839202 . + . Parent=GSCOCT00016143001 | |
| 25662 chr1 manual_curation exon 35838434 35838499 . + . Parent=GSCOCT00016143001 | |
| 25663 chr1 manual_curation exon 35838292 35838324 . + . Parent=GSCOCT00016143001 | |
| 25664 chr1 manual_curation exon 35837933 35838173 . + . Parent=GSCOCT00016143001 | |
| 25665 chr1 manual_curation CDS 35841109 35841216 . + 0 Parent=GSCOCT00016143001 | |
| 25666 chr1 manual_curation CDS 35840958 35841023 . + 0 Parent=GSCOCT00016143001 | |
| 25667 chr1 manual_curation CDS 35840761 35840838 . + 0 Parent=GSCOCT00016143001 | |
| 25668 chr1 manual_curation CDS 35840236 35840282 . + 1 Parent=GSCOCT00016143001 | |
| 25669 chr1 manual_curation CDS 35840028 35840133 . + 0 Parent=GSCOCT00016143001 | |
| 25670 chr1 manual_curation CDS 35839857 35839934 . + 0 Parent=GSCOCT00016143001 | |
| 25671 chr1 manual_curation CDS 35839086 35839202 . + 0 Parent=GSCOCT00016143001 | |
| 25672 chr1 manual_curation CDS 35838434 35838499 . + 0 Parent=GSCOCT00016143001 | |
| 25673 chr1 manual_curation CDS 35838292 35838324 . + 0 Parent=GSCOCT00016143001 | |
| 25674 chr1 manual_curation CDS 35838108 35838173 . + 0 Parent=GSCOCT00016143001 | |
| 25675 chr1 manual_curation gene 35842332 35846761 . - . ID=GSCOCG00016142001;Name=Cc01_g18880 | |
| 25676 chr1 manual_curation mRNA 35842332 35846761 . - . ID=GSCOCT00016142001;Parent=GSCOCG00016142001;Name=Cc01_g18880 | |
| 25677 chr1 manual_curation polypeptide 35842941 35846506 . - . ID=GSCOCP00016142001;Dbxref=GENE3D:G3DSA:4.10.280.10,InterPro:IPR001092,InterPro:IPR011598,PFAM:PF00010,PROFILE:PS50888,SMART:SM00353,SUPERFAMILY:SSF47459,SwissProt:O22768,SwissProt:Q93Y00,SwissProt:Q9ZUG9,TAIR:AT1G03040.1,TAIR:AT2G24260.1,TAIR:AT4G02590.1,TrEMBL:B9S4R9,TrEMBL:D7SQJ7,TrEMBL:I1N9L8;Derives_from=GSCOCT00016142001;Name=Cc01_g18880;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0030528,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Transcription factor UNE12,CC_functional_completeness:complete,CC_gene:UNE12,CC_gene:BHLH7,CC_gene:BHLH66;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016142001~ Transcription factor UNE12~ UNE12~ complete;original_location=join(1404685..1405065%2C1405821..1405940%2C1406281..1406346%2C1407143..1407208%2C1407862..1407939%2C1408020..1408250);owner=coffea | |
| 25678 chr1 manual_curation exon 35846126 35846761 . - . Parent=GSCOCT00016142001 | |
| 25679 chr1 manual_curation exon 35845251 35845370 . - . Parent=GSCOCT00016142001 | |
| 25680 chr1 manual_curation exon 35844845 35844910 . - . Parent=GSCOCT00016142001 | |
| 25681 chr1 manual_curation exon 35843983 35844048 . - . Parent=GSCOCT00016142001 | |
| 25682 chr1 manual_curation exon 35843252 35843329 . - . Parent=GSCOCT00016142001 | |
| 25683 chr1 manual_curation exon 35842332 35843171 . - . Parent=GSCOCT00016142001 | |
| 25684 chr1 manual_curation CDS 35846126 35846506 . - 0 Parent=GSCOCT00016142001 | |
| 25685 chr1 manual_curation CDS 35845251 35845370 . - 0 Parent=GSCOCT00016142001 | |
| 25686 chr1 manual_curation CDS 35844845 35844910 . - 0 Parent=GSCOCT00016142001 | |
| 25687 chr1 manual_curation CDS 35843983 35844048 . - 0 Parent=GSCOCT00016142001 | |
| 25688 chr1 manual_curation CDS 35843252 35843329 . - 0 Parent=GSCOCT00016142001 | |
| 25689 chr1 manual_curation CDS 35842941 35843171 . - 0 Parent=GSCOCT00016142001 | |
| 25690 chr1 manual_curation gene 35851973 35858945 . - . ID=GSCOCG00016140001;Name=Cc01_g18890 | |
| 25691 chr1 manual_curation mRNA 35851973 35858945 . - . ID=GSCOCT00016140001;Parent=GSCOCG00016140001;Name=Cc01_g18890 | |
| 25692 chr1 manual_curation polypeptide 35852402 35858255 . - . ID=GSCOCP00016140001;Dbxref=GENE3D:G3DSA:1.20.920.10,GENE3D:G3DSA:3.40.630.30,InterPro:IPR000182,InterPro:IPR001487,InterPro:IPR016181,InterPro:IPR018359,InterPro:IPR022610,PFAM:PF00439,PFAM:PF00583,PRINTS:PR00503,PROFILE:PS50014,PROFILE:PS51186,PROSITE:PS00633,SMART:SM00297,SUPERFAMILY:SSF47370,SUPERFAMILY:SSF55729,SwissProt:Q03330,SwissProt:Q338B9,SwissProt:Q9AR19,TAIR:AT3G54610.1,TrEMBL:B9H8G2,TrEMBL:B9S4R6,TrEMBL:F6GXL0;Derives_from=GSCOCT00016140001;Name=Cc01_g18890;Ontology_term=CC_evidence_code:ISS,GO:0008080,GO:0008152,CC_EC_number:missing_EC_number,PRODUCT:Histone acetyltransferase GCN5,CC_functional_completeness:fragment,CC_gene:GCN5,CC_gene:HAG1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016140001~ Histone acetyltransferase GCN5~ GCN5~ fragment;original_location=join(1392936..1393106%2C1393189..1393253%2C1393392..1393472%2C1394341..1394412%2C1394912..1395124%2C1395315..1395414%2C1395674..1395742%2C1396468..1396522%2C1397036..1397154%2C1397852..1397945%2C1398554..1398789);owner=coffea | |
| 25693 chr1 manual_curation exon 35858085 35858945 . - . Parent=GSCOCT00016140001 | |
| 25694 chr1 manual_curation exon 35857938 35858002 . - . Parent=GSCOCT00016140001 | |
| 25695 chr1 manual_curation exon 35857719 35857799 . - . Parent=GSCOCT00016140001 | |
| 25696 chr1 manual_curation exon 35856779 35856850 . - . Parent=GSCOCT00016140001 | |
| 25697 chr1 manual_curation exon 35856067 35856279 . - . Parent=GSCOCT00016140001 | |
| 25698 chr1 manual_curation exon 35855777 35855876 . - . Parent=GSCOCT00016140001 | |
| 25699 chr1 manual_curation exon 35855449 35855517 . - . Parent=GSCOCT00016140001 | |
| 25700 chr1 manual_curation exon 35854669 35854723 . - . Parent=GSCOCT00016140001 | |
| 25701 chr1 manual_curation exon 35854037 35854155 . - . Parent=GSCOCT00016140001 | |
| 25702 chr1 manual_curation exon 35853246 35853339 . - . Parent=GSCOCT00016140001 | |
| 25703 chr1 manual_curation exon 35851973 35852637 . - . Parent=GSCOCT00016140001 | |
| 25704 chr1 manual_curation CDS 35858085 35858255 . - 0 Parent=GSCOCT00016140001 | |
| 25705 chr1 manual_curation CDS 35857938 35858002 . - 0 Parent=GSCOCT00016140001 | |
| 25706 chr1 manual_curation CDS 35857719 35857799 . - 2 Parent=GSCOCT00016140001 | |
| 25707 chr1 manual_curation CDS 35856779 35856850 . - 2 Parent=GSCOCT00016140001 | |
| 25708 chr1 manual_curation CDS 35856067 35856279 . - 2 Parent=GSCOCT00016140001 | |
| 25709 chr1 manual_curation CDS 35855777 35855876 . - 2 Parent=GSCOCT00016140001 | |
| 25710 chr1 manual_curation CDS 35855449 35855517 . - 0 Parent=GSCOCT00016140001 | |
| 25711 chr1 manual_curation CDS 35854669 35854723 . - 0 Parent=GSCOCT00016140001 | |
| 25712 chr1 manual_curation CDS 35854037 35854155 . - 1 Parent=GSCOCT00016140001 | |
| 25713 chr1 manual_curation CDS 35853246 35853339 . - 0 Parent=GSCOCT00016140001 | |
| 25714 chr1 manual_curation CDS 35852402 35852637 . - 1 Parent=GSCOCT00016140001 | |
| 25715 chr1 manual_curation gene 35873067 35876709 . - . ID=GSCOCG00016136001;Name=Cc01_g18900 | |
| 25716 chr1 manual_curation mRNA 35873067 35876709 . - . ID=GSCOCT00016136001;Parent=GSCOCG00016136001;Name=Cc01_g18900 | |
| 25717 chr1 manual_curation polypeptide 35873133 35874437 . - . ID=GSCOCP00016136001;Derives_from=GSCOCT00016136001;Name=Cc01_g18900;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016136001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(1376754..1376787%2C1377503..1377609%2C1377742..1377804%2C1377975..1378058);owner=coffea | |
| 25718 chr1 manual_curation exon 35876353 35876709 . - . Parent=GSCOCT00016136001 | |
| 25719 chr1 manual_curation exon 35874404 35874452 . - . Parent=GSCOCT00016136001 | |
| 25720 chr1 manual_curation exon 35873582 35873688 . - . Parent=GSCOCT00016136001 | |
| 25721 chr1 manual_curation exon 35873387 35873449 . - . Parent=GSCOCT00016136001 | |
| 25722 chr1 manual_curation exon 35873067 35873216 . - . Parent=GSCOCT00016136001 | |
| 25723 chr1 manual_curation CDS 35874404 35874437 . - 0 Parent=GSCOCT00016136001 | |
| 25724 chr1 manual_curation CDS 35873582 35873688 . - 1 Parent=GSCOCT00016136001 | |
| 25725 chr1 manual_curation CDS 35873387 35873449 . - 0 Parent=GSCOCT00016136001 | |
| 25726 chr1 manual_curation CDS 35873133 35873216 . - 0 Parent=GSCOCT00016136001 | |
| 25727 chr1 manual_curation gene 35880220 35888097 . - . ID=GSCOCG00016133001;Name=Cc01_g18910 | |
| 25728 chr1 manual_curation mRNA 35880220 35888097 . - . ID=GSCOCT00016133001;Parent=GSCOCG00016133001;Name=Cc01_g18910 | |
| 25729 chr1 manual_curation polypeptide 35881167 35887964 . - . ID=GSCOCP00016133001;Dbxref=InterPro:IPR003191,InterPro:IPR015894,PFAM:PF02263,PFAM:PF02841,SUPERFAMILY:SSF48340,SwissProt:Q8N8V2,SwissProt:Q96PP8,SwissProt:Q96PP9,TAIR:AT2G38840.1,TAIR:AT5G46070.1,TrEMBL:B9H8G1,TrEMBL:B9S4R5,TrEMBL:D7SQJ1;Derives_from=GSCOCT00016133001;Name=Cc01_g18910;Ontology_term=CC_evidence_code:ISS,GO:0003924,GO:0005525,CC_EC_number:missing_EC_number,PRODUCT:Guanylate-binding family protein,CC_functional_completeness:complete,CC_gene:GBP4,CC_gene:GBP7,CC_gene:GBP5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016133001~ Guanylate-binding family protein~ GBP4~ complete;original_location=join(1363227..1363318%2C1364489..1364591%2C1364873..1364942%2C1365042..1365080%2C1365188..1365305%2C1365389..1365446%2C1365773..1365837%2C1365969..1365975%2C1366070..1366130%2C1366552..1366611%2C1366709..1366728%2C1366807..1366872%2C1367314..1367481%2C1367951..1368208%2C1368285..1368497%2C1369200..1369471%2C1369892..1370024);owner=coffea | |
| 25730 chr1 manual_curation exon 35887873 35888097 . - . Parent=GSCOCT00016133001 | |
| 25731 chr1 manual_curation exon 35886600 35886702 . - . Parent=GSCOCT00016133001 | |
| 25732 chr1 manual_curation exon 35886249 35886318 . - . Parent=GSCOCT00016133001 | |
| 25733 chr1 manual_curation exon 35886111 35886149 . - . Parent=GSCOCT00016133001 | |
| 25734 chr1 manual_curation exon 35885886 35886003 . - . Parent=GSCOCT00016133001 | |
| 25735 chr1 manual_curation exon 35885745 35885802 . - . Parent=GSCOCT00016133001 | |
| 25736 chr1 manual_curation exon 35885354 35885418 . - . Parent=GSCOCT00016133001 | |
| 25737 chr1 manual_curation exon 35885216 35885222 . - . Parent=GSCOCT00016133001 | |
| 25738 chr1 manual_curation exon 35885061 35885121 . - . Parent=GSCOCT00016133001 | |
| 25739 chr1 manual_curation exon 35884580 35884639 . - . Parent=GSCOCT00016133001 | |
| 25740 chr1 manual_curation exon 35884463 35884482 . - . Parent=GSCOCT00016133001 | |
| 25741 chr1 manual_curation exon 35884319 35884384 . - . Parent=GSCOCT00016133001 | |
| 25742 chr1 manual_curation exon 35883710 35883877 . - . Parent=GSCOCT00016133001 | |
| 25743 chr1 manual_curation exon 35882983 35883240 . - . Parent=GSCOCT00016133001 | |
| 25744 chr1 manual_curation exon 35882694 35882906 . - . Parent=GSCOCT00016133001 | |
| 25745 chr1 manual_curation exon 35881720 35881991 . - . Parent=GSCOCT00016133001 | |
| 25746 chr1 manual_curation exon 35880220 35881299 . - . Parent=GSCOCT00016133001 | |
| 25747 chr1 manual_curation CDS 35887873 35887964 . - 0 Parent=GSCOCT00016133001 | |
| 25748 chr1 manual_curation CDS 35886600 35886702 . - 2 Parent=GSCOCT00016133001 | |
| 25749 chr1 manual_curation CDS 35886249 35886318 . - 0 Parent=GSCOCT00016133001 | |
| 25750 chr1 manual_curation CDS 35886111 35886149 . - 1 Parent=GSCOCT00016133001 | |
| 25751 chr1 manual_curation CDS 35885886 35886003 . - 1 Parent=GSCOCT00016133001 | |
| 25752 chr1 manual_curation CDS 35885745 35885802 . - 2 Parent=GSCOCT00016133001 | |
| 25753 chr1 manual_curation CDS 35885354 35885418 . - 0 Parent=GSCOCT00016133001 | |
| 25754 chr1 manual_curation CDS 35885216 35885222 . - 2 Parent=GSCOCT00016133001 | |
| 25755 chr1 manual_curation CDS 35885061 35885121 . - 0 Parent=GSCOCT00016133001 | |
| 25756 chr1 manual_curation CDS 35884580 35884639 . - 1 Parent=GSCOCT00016133001 | |
| 25757 chr1 manual_curation CDS 35884463 35884482 . - 1 Parent=GSCOCT00016133001 | |
| 25758 chr1 manual_curation CDS 35884319 35884384 . - 0 Parent=GSCOCT00016133001 | |
| 25759 chr1 manual_curation CDS 35883710 35883877 . - 0 Parent=GSCOCT00016133001 | |
| 25760 chr1 manual_curation CDS 35882983 35883240 . - 0 Parent=GSCOCT00016133001 | |
| 25761 chr1 manual_curation CDS 35882694 35882906 . - 0 Parent=GSCOCT00016133001 | |
| 25762 chr1 manual_curation CDS 35881720 35881991 . - 0 Parent=GSCOCT00016133001 | |
| 25763 chr1 manual_curation CDS 35881167 35881299 . - 2 Parent=GSCOCT00016133001 | |
| 25764 chr1 manual_curation gene 35896834 35899254 . - . ID=GSCOCG00016132001;Name=Cc01_g18920 | |
| 25765 chr1 manual_curation mRNA 35896834 35899254 . - . ID=GSCOCT00016132001;Parent=GSCOCG00016132001;Name=Cc01_g18920 | |
| 25766 chr1 manual_curation polypeptide 35897150 35898506 . - . ID=GSCOCP00016132001;Dbxref=InterPro:IPR006502,PFAM:PF04720,TAIR:AT2G38820.2,TAIR:AT3G22970.1,TAIR:AT4G14620.1,TIGRFAMs:TIGR01615,TrEMBL:B9GS82,TrEMBL:B9H8F6,TrEMBL:D7T3I2;Derives_from=GSCOCT00016132001;Name=Cc01_g18920;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF506) ,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016132001~ Protein of unknown function (DUF506) ~ unknown_gene~ modules;original_location=join(1352685..1353095%2C1353190..1353382%2C1353479..1354041);owner=coffea | |
| 25767 chr1 manual_curation exon 35898096 35899254 . - . Parent=GSCOCT00016132001 | |
| 25768 chr1 manual_curation exon 35897809 35898001 . - . Parent=GSCOCT00016132001 | |
| 25769 chr1 manual_curation exon 35896834 35897712 . - . Parent=GSCOCT00016132001 | |
| 25770 chr1 manual_curation CDS 35898096 35898506 . - 0 Parent=GSCOCT00016132001 | |
| 25771 chr1 manual_curation CDS 35897809 35898001 . - 0 Parent=GSCOCT00016132001 | |
| 25772 chr1 manual_curation CDS 35897150 35897712 . - 1 Parent=GSCOCT00016132001 | |
| 25773 chr1 manual_curation gene 35912537 35914229 . + . ID=GSCOCG00016130001;Name=Cc01_g18930 | |
| 25774 chr1 manual_curation mRNA 35912537 35914229 . + . ID=GSCOCT00016130001;Parent=GSCOCG00016130001;Name=Cc01_g18930 | |
| 25775 chr1 manual_curation polypeptide 35912722 35913919 . + . ID=GSCOCP00016130001;Dbxref=GENE3D:G3DSA:1.10.20.10,InterPro:IPR002119,InterPro:IPR007125,InterPro:IPR009072,PANTHER:PTHR23430,PFAM:PF00125,PRINTS:PR00620,PROSITE:PS00046,SMART:SM00414,SUPERFAMILY:SSF47113,SwissProt:O23628,SwissProt:Q84MP7,SwissProt:Q8H7Y8,TAIR:AT1G52740.1,TAIR:AT2G38810.1,TAIR:AT3G54560.1,TrEMBL:B4FXB2,TrEMBL:B9IKT5,TrEMBL:C5XX54;Derives_from=GSCOCT00016130001;Name=Cc01_g18930;Ontology_term=CC_evidence_code:ISS,GO:0000786,GO:0003677,GO:0005634,GO:0006334,CC_EC_number:missing_EC_number,PRODUCT:Histone H2A variant 1,CC_functional_completeness:complete,CC_gene:H2AV,CC_gene:Os03g0743400,CC_gene:Os03g0162200;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016130001~ Histone H2A variant 1~ H2AV~ complete;original_location=complement(join(1338341..1338469%2C1337272..1337568));owner=coffea | |
| 25776 chr1 manual_curation exon 35912537 35912580 . + . Parent=GSCOCT00016130001 | |
| 25777 chr1 manual_curation exon 35913623 35914229 . + . Parent=GSCOCT00016130001 | |
| 25778 chr1 manual_curation exon 35912697 35912850 . + . Parent=GSCOCT00016130001 | |
| 25779 chr1 manual_curation CDS 35913623 35913919 . + 0 Parent=GSCOCT00016130001 | |
| 25780 chr1 manual_curation CDS 35912722 35912850 . + 0 Parent=GSCOCT00016130001 | |
| 25781 chr1 manual_curation gene 35916148 35920578 . + . ID=GSCOCG00016128001;Name=Cc01_g18940 | |
| 25782 chr1 manual_curation mRNA 35916148 35920578 . + . ID=GSCOCT00016128001;Parent=GSCOCG00016128001;Name=Cc01_g18940 | |
| 25783 chr1 manual_curation polypeptide 35916148 35920578 . + . ID=GSCOCP00016128001;Dbxref=TAIR:AT1G03055.1,TAIR:AT1G64680.1,TAIR:AT4G01995.1,TrEMBL:B8BLE6,TrEMBL:F6HBJ4,TrEMBL:I1JF58;Derives_from=GSCOCT00016128001;Name=Cc01_g18940;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016128001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=complement(join(1334662..1335043%2C1334397..1334540%2C1333303..1333400%2C1333017..1333078%2C1332635..1332741%2C1330613..1330731));owner=coffea | |
| 25784 chr1 manual_curation exon 35920460 35920578 . + . Parent=GSCOCT00016128001 | |
| 25785 chr1 manual_curation exon 35918450 35918556 . + . Parent=GSCOCT00016128001 | |
| 25786 chr1 manual_curation exon 35918113 35918174 . + . Parent=GSCOCT00016128001 | |
| 25787 chr1 manual_curation exon 35917791 35917888 . + . Parent=GSCOCT00016128001 | |
| 25788 chr1 manual_curation exon 35916651 35916794 . + . Parent=GSCOCT00016128001 | |
| 25789 chr1 manual_curation exon 35916148 35916529 . + . Parent=GSCOCT00016128001 | |
| 25790 chr1 manual_curation CDS 35920460 35920578 . + 1 Parent=GSCOCT00016128001 | |
| 25791 chr1 manual_curation CDS 35918450 35918556 . + 2 Parent=GSCOCT00016128001 | |
| 25792 chr1 manual_curation CDS 35918113 35918174 . + 0 Parent=GSCOCT00016128001 | |
| 25793 chr1 manual_curation CDS 35917791 35917888 . + 1 Parent=GSCOCT00016128001 | |
| 25794 chr1 manual_curation CDS 35916651 35916794 . + 1 Parent=GSCOCT00016128001 | |
| 25795 chr1 manual_curation CDS 35916148 35916529 . + 0 Parent=GSCOCT00016128001 | |
| 25796 chr1 manual_curation gene 35932086 35937795 . + . ID=GSCOCG00016126001;Name=Cc01_g18950 | |
| 25797 chr1 manual_curation mRNA 35932086 35937795 . + . ID=GSCOCT00016126001;Parent=GSCOCG00016126001;Name=Cc01_g18950 | |
| 25798 chr1 manual_curation polypeptide 35932378 35937317 . + . ID=GSCOCP00016126001;Dbxref=InterPro:IPR013216,PFAM:PF08241,SwissProt:P23525,TAIR:AT3G63410.1,TrEMBL:B9GS89,TrEMBL:B9H8E6,TrEMBL:C6TGX5;Derives_from=GSCOCT00016126001;Name=Cc01_g18950;Ontology_term=CC_evidence_code:ISS,GO:0008152,GO:0008168,CC_EC_number:missing_EC_number,PRODUCT:37 kDa inner envelope membrane protein%2C chloroplastic,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016126001~ 37 kDa inner envelope membrane protein%2C chloroplastic~ unknown_gene~ complete;original_location=complement(join(1318248..1318813%2C1317482..1317788%2C1313874..1314029));owner=coffea | |
| 25799 chr1 manual_curation exon 35937162 35937795 . + . Parent=GSCOCT00016126001 | |
| 25800 chr1 manual_curation exon 35933403 35933709 . + . Parent=GSCOCT00016126001 | |
| 25801 chr1 manual_curation exon 35932086 35932943 . + . Parent=GSCOCT00016126001 | |
| 25802 chr1 manual_curation CDS 35937162 35937317 . + 0 Parent=GSCOCT00016126001 | |
| 25803 chr1 manual_curation CDS 35933403 35933709 . + 2 Parent=GSCOCT00016126001 | |
| 25804 chr1 manual_curation CDS 35932378 35932943 . + 0 Parent=GSCOCT00016126001 | |
| 25805 chr1 manual_curation gene 35937967 35943423 . - . ID=GSCOCG00016125001;Name=Cc01_g18960 | |
| 25806 chr1 manual_curation mRNA 35937967 35943423 . - . ID=GSCOCT00016125001;Parent=GSCOCG00016125001;Name=Cc01_g18960 | |
| 25807 chr1 manual_curation polypeptide 35938320 35943038 . - . ID=GSCOCP00016125001;Dbxref=GENE3D:G3DSA:2.40.100.10,InterPro:IPR002130,InterPro:IPR015891,InterPro:IPR020892,PFAM:PF00160,PRINTS:PR00153,PROFILE:PS50072,PROSITE:PS00170,SUPERFAMILY:SSF50891,SwissProt:P26882,SwissProt:Q6DGG0,SwissProt:Q9CR16,TAIR:AT2G15790.1,TAIR:AT3G63400.1,TAIR:AT4G32420.1,TrEMBL:F6HBJ1,TrEMBL:I1JNY3,TrEMBL:I1N9L1;Derives_from=GSCOCT00016125001;Name=Cc01_g18960;Ontology_term=CC_evidence_code:ISS,GO:0003755,GO:0006457,CC_EC_number:5.2.1.8,PRODUCT:Putative Uncharacterized protein,CC_functional_completeness:complete,CC_gene:Ppid,CC_gene:PPID;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016125001~ Putative Uncharacterized protein~ Ppid~ complete;original_location=join(1308153..1308230%2C1308379..1308433%2C1308707..1308795%2C1309743..1309767%2C1309876..1309914%2C1309998..1310115%2C1310294..1310454%2C1310561..1310918%2C1311019..1311101%2C1311251..1311455%2C1311545..1311895%2C1311977..1312057%2C1312520..1312871);owner=coffea | |
| 25808 chr1 manual_curation exon 35942961 35943423 . - . Parent=GSCOCT00016125001 | |
| 25809 chr1 manual_curation exon 35942758 35942812 . - . Parent=GSCOCT00016125001 | |
| 25810 chr1 manual_curation exon 35942396 35942484 . - . Parent=GSCOCT00016125001 | |
| 25811 chr1 manual_curation exon 35941424 35941448 . - . Parent=GSCOCT00016125001 | |
| 25812 chr1 manual_curation exon 35941277 35941315 . - . Parent=GSCOCT00016125001 | |
| 25813 chr1 manual_curation exon 35941076 35941193 . - . Parent=GSCOCT00016125001 | |
| 25814 chr1 manual_curation exon 35940737 35940897 . - . Parent=GSCOCT00016125001 | |
| 25815 chr1 manual_curation exon 35940273 35940630 . - . Parent=GSCOCT00016125001 | |
| 25816 chr1 manual_curation exon 35940090 35940172 . - . Parent=GSCOCT00016125001 | |
| 25817 chr1 manual_curation exon 35939736 35939940 . - . Parent=GSCOCT00016125001 | |
| 25818 chr1 manual_curation exon 35939296 35939646 . - . Parent=GSCOCT00016125001 | |
| 25819 chr1 manual_curation exon 35939134 35939214 . - . Parent=GSCOCT00016125001 | |
| 25820 chr1 manual_curation exon 35937967 35938671 . - . Parent=GSCOCT00016125001 | |
| 25821 chr1 manual_curation CDS 35942961 35943038 . - 0 Parent=GSCOCT00016125001 | |
| 25822 chr1 manual_curation CDS 35942758 35942812 . - 0 Parent=GSCOCT00016125001 | |
| 25823 chr1 manual_curation CDS 35942396 35942484 . - 1 Parent=GSCOCT00016125001 | |
| 25824 chr1 manual_curation CDS 35941424 35941448 . - 0 Parent=GSCOCT00016125001 | |
| 25825 chr1 manual_curation CDS 35941277 35941315 . - 1 Parent=GSCOCT00016125001 | |
| 25826 chr1 manual_curation CDS 35941076 35941193 . - 1 Parent=GSCOCT00016125001 | |
| 25827 chr1 manual_curation CDS 35940737 35940897 . - 2 Parent=GSCOCT00016125001 | |
| 25828 chr1 manual_curation CDS 35940273 35940630 . - 1 Parent=GSCOCT00016125001 | |
| 25829 chr1 manual_curation CDS 35940090 35940172 . - 2 Parent=GSCOCT00016125001 | |
| 25830 chr1 manual_curation CDS 35939736 35939940 . - 1 Parent=GSCOCT00016125001 | |
| 25831 chr1 manual_curation CDS 35939296 35939646 . - 2 Parent=GSCOCT00016125001 | |
| 25832 chr1 manual_curation CDS 35939134 35939214 . - 2 Parent=GSCOCT00016125001 | |
| 25833 chr1 manual_curation CDS 35938320 35938671 . - 2 Parent=GSCOCT00016125001 | |
| 25834 chr1 manual_curation gene 35949599 35950914 . + . ID=GSCOCG00016122001;Name=Cc01_g18970 | |
| 25835 chr1 manual_curation mRNA 35949599 35950914 . + . ID=GSCOCT00016122001;Parent=GSCOCG00016122001;Name=Cc01_g18970 | |
| 25836 chr1 manual_curation polypeptide 35949958 35950803 . + . ID=GSCOCP00016122001;Dbxref=TAIR:AT5G05830.1,TAIR:AT5G59000.1,TrEMBL:A9PAJ2,TrEMBL:A9PE12,TrEMBL:B9HPA1;Derives_from=GSCOCT00016122001;Name=Cc01_g18970;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016122001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1301127..1301233%2C1300388..1300610));owner=coffea | |
| 25837 chr1 manual_curation exon 35950581 35950914 . + . Parent=GSCOCT00016122001 | |
| 25838 chr1 manual_curation exon 35949599 35950064 . + . Parent=GSCOCT00016122001 | |
| 25839 chr1 manual_curation CDS 35950581 35950803 . + 2 Parent=GSCOCT00016122001 | |
| 25840 chr1 manual_curation CDS 35949958 35950064 . + 0 Parent=GSCOCT00016122001 | |
| 25841 chr1 manual_curation gene 35958578 35961827 . - . ID=GSCOCG00016120001;Name=Cc01_g18980 | |
| 25842 chr1 manual_curation mRNA 35958578 35961827 . - . ID=GSCOCT00016120001;Parent=GSCOCG00016120001;Name=Cc01_g18980 | |
| 25843 chr1 manual_curation polypeptide 35958966 35961827 . - . ID=GSCOCP00016120001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q9M1V3,SwissProt:Q9SN39,SwissProt:Q9SS60,TAIR:AT3G03580.1,TAIR:AT3G63370.1,TAIR:AT4G18750.1,TIGRFAMs:TIGR00756,TrEMBL:A5CA14,TrEMBL:B9S4P3,TrEMBL:F6HBI8;Derives_from=GSCOCT00016120001;Name=Cc01_g18980;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At3g63370,CC_functional_completeness:complete,CC_gene:PCMP-H83,CC_gene:PCMP-H45,CC_gene:PCMP-H23;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016120001~ Pentatricopeptide repeat-containing protein At3g63370~ PCMP-H83~ complete;original_location=1289364..1292225;owner=coffea | |
| 25844 chr1 manual_curation exon 35958578 35961827 . - . Parent=GSCOCT00016120001 | |
| 25845 chr1 manual_curation CDS 35958966 35961827 . - 0 Parent=GSCOCT00016120001 | |
| 25846 chr1 manual_curation gene 35963321 35983030 . - . ID=GSCOCG00016117001;Name=Cc01_g18990 | |
| 25847 chr1 manual_curation mRNA 35963321 35983030 . - . ID=GSCOCT00016117001;Parent=GSCOCG00016117001;Name=Cc01_g18990 | |
| 25848 chr1 manual_curation polypeptide 35963982 35982252 . - . ID=GSCOCP00016117001;Dbxref=GENE3D:G3DSA:1.10.1540.10,GENE3D:G3DSA:2.130.10.10,InterPro:IPR000409,InterPro:IPR001680,InterPro:IPR008985,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR016024,InterPro:IPR017986,InterPro:IPR019775,InterPro:IPR019781,InterPro:IPR019782,PFAM:PF00400,PFAM:PF02138,PROFILE:PS50082,PROFILE:PS50197,PROFILE:PS50294,PROSITE:PS00678,SMART:SM00320,SUPERFAMILY:SSF48371,SUPERFAMILY:SSF49899,SUPERFAMILY:SSF50978,SUPERFAMILY:SSF81837,SwissProt:Q55DM1,SwissProt:Q6VNB8,SwissProt:Q8IZQ1,TAIR:AT1G03060.1,TAIR:AT2G45540.2,TAIR:AT4G02660.1,TrEMBL:A5CA13,TrEMBL:B9S4P2,TrEMBL:G7ICR2;Derives_from=GSCOCT00016117001;Name=Cc01_g18990;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:Beige/BEACH domain %3BWD domain%2C G-beta repeat protein,CC_functional_completeness:complete,CC_gene:Wdfy3,CC_gene:WDFY3,CC_gene:lvsA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016117001~ Beige/BEACH domain %3BWD domain%2C G-beta repeat protein~ Wdfy3~ complete;original_location=join(1268939..1269102%2C1271576..1271648%2C1271739..1271824%2C1272245..1272380%2C1272467..1272523%2C1272903..1273079%2C1273263..1273454%2C1273576..1273641%2C1274728..1274842%2C1275106..1276280%2C1276762..1277458%2C1277535..1277637%2C1277727..1278835%2C1278957..1280604%2C1280807..1283842%2C1284402..1284710%2C1284842..1285148%2C1285239..1285385%2C1286034..1287209);owner=coffea | |
| 25849 chr1 manual_curation exon 35982089 35983030 . - . Parent=GSCOCT00016117001 | |
| 25850 chr1 manual_curation exon 35979543 35979615 . - . Parent=GSCOCT00016117001 | |
| 25851 chr1 manual_curation exon 35979367 35979452 . - . Parent=GSCOCT00016117001 | |
| 25852 chr1 manual_curation exon 35978811 35978946 . - . Parent=GSCOCT00016117001 | |
| 25853 chr1 manual_curation exon 35978668 35978724 . - . Parent=GSCOCT00016117001 | |
| 25854 chr1 manual_curation exon 35978112 35978288 . - . Parent=GSCOCT00016117001 | |
| 25855 chr1 manual_curation exon 35977737 35977928 . - . Parent=GSCOCT00016117001 | |
| 25856 chr1 manual_curation exon 35977550 35977615 . - . Parent=GSCOCT00016117001 | |
| 25857 chr1 manual_curation exon 35976349 35976463 . - . Parent=GSCOCT00016117001 | |
| 25858 chr1 manual_curation exon 35974911 35976085 . - . Parent=GSCOCT00016117001 | |
| 25859 chr1 manual_curation exon 35973733 35974429 . - . Parent=GSCOCT00016117001 | |
| 25860 chr1 manual_curation exon 35973554 35973656 . - . Parent=GSCOCT00016117001 | |
| 25861 chr1 manual_curation exon 35972356 35973464 . - . Parent=GSCOCT00016117001 | |
| 25862 chr1 manual_curation exon 35970587 35972234 . - . Parent=GSCOCT00016117001 | |
| 25863 chr1 manual_curation exon 35967349 35970384 . - . Parent=GSCOCT00016117001 | |
| 25864 chr1 manual_curation exon 35966481 35966789 . - . Parent=GSCOCT00016117001 | |
| 25865 chr1 manual_curation exon 35966043 35966349 . - . Parent=GSCOCT00016117001 | |
| 25866 chr1 manual_curation exon 35965806 35965952 . - . Parent=GSCOCT00016117001 | |
| 25867 chr1 manual_curation exon 35963321 35965157 . - . Parent=GSCOCT00016117001 | |
| 25868 chr1 manual_curation CDS 35982089 35982252 . - 0 Parent=GSCOCT00016117001 | |
| 25869 chr1 manual_curation CDS 35979543 35979615 . - 2 Parent=GSCOCT00016117001 | |
| 25870 chr1 manual_curation CDS 35979367 35979452 . - 0 Parent=GSCOCT00016117001 | |
| 25871 chr1 manual_curation CDS 35978811 35978946 . - 2 Parent=GSCOCT00016117001 | |
| 25872 chr1 manual_curation CDS 35978668 35978724 . - 0 Parent=GSCOCT00016117001 | |
| 25873 chr1 manual_curation CDS 35978112 35978288 . - 0 Parent=GSCOCT00016117001 | |
| 25874 chr1 manual_curation CDS 35977737 35977928 . - 0 Parent=GSCOCT00016117001 | |
| 25875 chr1 manual_curation CDS 35977550 35977615 . - 0 Parent=GSCOCT00016117001 | |
| 25876 chr1 manual_curation CDS 35976349 35976463 . - 0 Parent=GSCOCT00016117001 | |
| 25877 chr1 manual_curation CDS 35974911 35976085 . - 1 Parent=GSCOCT00016117001 | |
| 25878 chr1 manual_curation CDS 35973733 35974429 . - 0 Parent=GSCOCT00016117001 | |
| 25879 chr1 manual_curation CDS 35973554 35973656 . - 1 Parent=GSCOCT00016117001 | |
| 25880 chr1 manual_curation CDS 35972356 35973464 . - 2 Parent=GSCOCT00016117001 | |
| 25881 chr1 manual_curation CDS 35970587 35972234 . - 1 Parent=GSCOCT00016117001 | |
| 25882 chr1 manual_curation CDS 35967349 35970384 . - 2 Parent=GSCOCT00016117001 | |
| 25883 chr1 manual_curation CDS 35966481 35966789 . - 2 Parent=GSCOCT00016117001 | |
| 25884 chr1 manual_curation CDS 35966043 35966349 . - 2 Parent=GSCOCT00016117001 | |
| 25885 chr1 manual_curation CDS 35965806 35965952 . - 0 Parent=GSCOCT00016117001 | |
| 25886 chr1 manual_curation CDS 35963982 35965157 . - 0 Parent=GSCOCT00016117001 | |
| 25887 chr1 manual_curation gene 35987830 35995376 . + . ID=GSCOCG00016116001;Name=Cc01_g19000 | |
| 25888 chr1 manual_curation mRNA 35987830 35995376 . + . ID=GSCOCT00016116001;Parent=GSCOCG00016116001;Name=Cc01_g19000 | |
| 25889 chr1 manual_curation polypeptide 35987931 35994866 . + . ID=GSCOCP00016116001;Dbxref=InterPro:IPR003347,PROFILE:PS51184,SMART:SM00558,SwissProt:A2RUC4,SwissProt:E1C7T6,SwissProt:Q55DF5,TAIR:AT3G20810.2,TAIR:AT5G19840.2,TrEMBL:B9S4N8,TrEMBL:G7ICR6,TrEMBL:I1L876;Derives_from=GSCOCT00016116001;Name=Cc01_g19000;Ontology_term=CC_evidence_code:ISS,CC_EC_number:1.14.11.16,PRODUCT:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein,CC_functional_completeness:complete,CC_gene:TYW5,CC_gene:jcdD;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016116001~ 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein~ TYW5~ complete;original_location=complement(join(1263150..1263260%2C1262948..1263025%2C1262663..1262746%2C1262414..1262569%2C1262154..1262222%2C1261903..1262029%2C1260843..1260915%2C1260596..1260712%2C1259897..1260016%2C1259760..1259778%2C1259558..1259639%2C1259127..1259398%2C1257774..1257889%2C1257572..1257665%2C1256325..1256393));owner=coffea | |
| 25890 chr1 manual_curation exon 35994798 35995376 . + . Parent=GSCOCT00016116001 | |
| 25891 chr1 manual_curation exon 35993526 35993619 . + . Parent=GSCOCT00016116001 | |
| 25892 chr1 manual_curation exon 35993302 35993417 . + . Parent=GSCOCT00016116001 | |
| 25893 chr1 manual_curation exon 35991793 35992064 . + . Parent=GSCOCT00016116001 | |
| 25894 chr1 manual_curation exon 35991552 35991633 . + . Parent=GSCOCT00016116001 | |
| 25895 chr1 manual_curation exon 35991413 35991431 . + . Parent=GSCOCT00016116001 | |
| 25896 chr1 manual_curation exon 35991175 35991294 . + . Parent=GSCOCT00016116001 | |
| 25897 chr1 manual_curation exon 35990479 35990595 . + . Parent=GSCOCT00016116001 | |
| 25898 chr1 manual_curation exon 35990276 35990348 . + . Parent=GSCOCT00016116001 | |
| 25899 chr1 manual_curation exon 35989162 35989288 . + . Parent=GSCOCT00016116001 | |
| 25900 chr1 manual_curation exon 35988969 35989037 . + . Parent=GSCOCT00016116001 | |
| 25901 chr1 manual_curation exon 35988622 35988777 . + . Parent=GSCOCT00016116001 | |
| 25902 chr1 manual_curation exon 35988445 35988528 . + . Parent=GSCOCT00016116001 | |
| 25903 chr1 manual_curation exon 35988166 35988243 . + . Parent=GSCOCT00016116001 | |
| 25904 chr1 manual_curation exon 35987830 35988041 . + . Parent=GSCOCT00016116001 | |
| 25905 chr1 manual_curation CDS 35994798 35994866 . + 0 Parent=GSCOCT00016116001 | |
| 25906 chr1 manual_curation CDS 35993526 35993619 . + 2 Parent=GSCOCT00016116001 | |
| 25907 chr1 manual_curation CDS 35993302 35993417 . + 0 Parent=GSCOCT00016116001 | |
| 25908 chr1 manual_curation CDS 35991793 35992064 . + 1 Parent=GSCOCT00016116001 | |
| 25909 chr1 manual_curation CDS 35991552 35991633 . + 0 Parent=GSCOCT00016116001 | |
| 25910 chr1 manual_curation CDS 35991413 35991431 . + 2 Parent=GSCOCT00016116001 | |
| 25911 chr1 manual_curation CDS 35991175 35991294 . + 2 Parent=GSCOCT00016116001 | |
| 25912 chr1 manual_curation CDS 35990479 35990595 . + 2 Parent=GSCOCT00016116001 | |
| 25913 chr1 manual_curation CDS 35990276 35990348 . + 1 Parent=GSCOCT00016116001 | |
| 25914 chr1 manual_curation CDS 35989162 35989288 . + 0 Parent=GSCOCT00016116001 | |
| 25915 chr1 manual_curation CDS 35988969 35989037 . + 0 Parent=GSCOCT00016116001 | |
| 25916 chr1 manual_curation CDS 35988622 35988777 . + 0 Parent=GSCOCT00016116001 | |
| 25917 chr1 manual_curation CDS 35988445 35988528 . + 0 Parent=GSCOCT00016116001 | |
| 25918 chr1 manual_curation CDS 35988166 35988243 . + 0 Parent=GSCOCT00016116001 | |
| 25919 chr1 manual_curation CDS 35987931 35988041 . + 0 Parent=GSCOCT00016116001 | |
| 25920 chr1 manual_curation gene 35998337 36002590 . - . ID=GSCOCG00016114001;Name=Cc01_g19010 | |
| 25921 chr1 manual_curation mRNA 35998337 36002590 . - . ID=GSCOCT00016114001;Parent=GSCOCG00016114001;Name=Cc01_g19010 | |
| 25922 chr1 manual_curation polypeptide 35998624 36002034 . - . ID=GSCOCP00016114001;Dbxref=InterPro:IPR007087,InterPro:IPR015880,InterPro:IPR022755,PFAM:PF12171,PROFILE:PS50157,PROSITE:PS00028,SMART:SM00355,SwissProt:Q700D2,SwissProt:Q9FFH3,SwissProt:Q9ZWA6,TAIR:AT1G03840.1,TAIR:AT3G50700.1,TAIR:AT4G02670.1,TrEMBL:B9H8D5,TrEMBL:B9S4N7,TrEMBL:F6HBI4;Derives_from=GSCOCT00016114001;Name=Cc01_g19010;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:MGP,CC_gene:NUC,CC_gene:JKD;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016114001~ Putative uncharacterized protein~ MGP~ complete;original_location=join(1249157..1249310%2C1249490..1249886%2C1251664..1252567);owner=coffea | |
| 25923 chr1 manual_curation exon 36001881 36002590 . - . Parent=GSCOCT00016114001 | |
| 25924 chr1 manual_curation exon 36001305 36001701 . - . Parent=GSCOCT00016114001 | |
| 25925 chr1 manual_curation exon 35998337 35999527 . - . Parent=GSCOCT00016114001 | |
| 25926 chr1 manual_curation CDS 36001881 36002034 . - 0 Parent=GSCOCT00016114001 | |
| 25927 chr1 manual_curation CDS 36001305 36001701 . - 1 Parent=GSCOCT00016114001 | |
| 25928 chr1 manual_curation CDS 35998624 35999527 . - 2 Parent=GSCOCT00016114001 | |
| 25929 chr1 manual_curation gene 36007587 36010172 . - . ID=GSCOCG00016112001;Name=Cc01_g19020 | |
| 25930 chr1 manual_curation mRNA 36007587 36010172 . - . ID=GSCOCT00016112001;Parent=GSCOCG00016112001;Name=Cc01_g19020 | |
| 25931 chr1 manual_curation polypeptide 36007587 36009684 . - . ID=GSCOCP00016112001;Dbxref=GENE3D:G3DSA:1.10.10.10,InterPro:IPR000232,InterPro:IPR011991,PFAM:PF00447,PRINTS:PR00056,PROSITE:PS00434,SMART:SM00415,SwissProt:Q6VBB2,SwissProt:Q8H7Y6,SwissProt:Q9LUH8,TAIR:AT2G26150.1,TAIR:AT3G22830.1,TAIR:AT3G51910.1,TrEMBL:B9H8D4,TrEMBL:B9S4N6,TrEMBL:F6HBI2;Derives_from=GSCOCT00016112001;Name=Cc01_g19020;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0005634,GO:0043565,CC_EC_number:missing_EC_number,PRODUCT:Heat stress transcription factor A-6b,CC_functional_completeness:complete,CC_gene:HSFA6b,CC_gene:HSFA2B,CC_gene:HSFA2D;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016112001~ Heat stress transcription factor A-6b~ HSFA6b~ complete;original_location=join(1241507..1241809%2C1242843..1243604);owner=coffea | |
| 25932 chr1 manual_curation exon 36009382 36010172 . - . Parent=GSCOCT00016112001 | |
| 25933 chr1 manual_curation exon 36007587 36008348 . - . Parent=GSCOCT00016112001 | |
| 25934 chr1 manual_curation CDS 36009382 36009684 . - 0 Parent=GSCOCT00016112001 | |
| 25935 chr1 manual_curation CDS 36007587 36008348 . - 0 Parent=GSCOCT00016112001 | |
| 25936 chr1 manual_curation gene 36016879 36029794 . + . ID=GSCOCG00016111001;Name=Cc01_g19030 | |
| 25937 chr1 manual_curation mRNA 36016879 36029794 . + . ID=GSCOCT00016111001;Parent=GSCOCG00016111001;Name=Cc01_g19030 | |
| 25938 chr1 manual_curation polypeptide 36017055 36029721 . + . ID=GSCOCP00016111001;Dbxref=GENE3D:G3DSA:3.60.40.10,InterPro:IPR000719,InterPro:IPR001932,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR014045,InterPro:IPR015655,InterPro:IPR017442,PANTHER:PTHR13832,PFAM:PF00069,PFAM:PF00481,PROFILE:PS50011,PROSITE:PS00108,SMART:SM00220,SMART:SM00332,SUPERFAMILY:SSF56112,SUPERFAMILY:SSF81606,SwissProt:A3CCP9,SwissProt:Q8RXY0,SwissProt:Q93YS2,TAIR:AT1G72770.1,TAIR:AT3G63320.1,TAIR:AT3G63340.2,TrEMBL:B9S4N3,TrEMBL:F2E6Y3,TrEMBL:G7ICS2;Derives_from=GSCOCT00016111001;Name=Cc01_g19030;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:3.1.3.16,PRODUCT:Probable inactive protein kinase At3g63330,CC_functional_completeness:modules,CC_gene:At3g63330,CC_gene:At3g63340,CC_gene:Os11g0586001;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016111001~ Probable inactive protein kinase At3g63330~ At3g63330~ modules;original_location=complement(join(1233845..1234136%2C1233113..1233368%2C1232200..1232305%2C1231967..1232108%2C1231433..1231697%2C1230936..1231303%2C1230024..1230097%2C1229306..1229456%2C1228958..1229132%2C1228058..1228292%2C1226952..1227099%2C1226593..1226858%2C1225533..1225590%2C1224905..1224992%2C1223770..1223844%2C1223113..1223196%2C1222561..1222704%2C1222364..1222445%2C1221911..1221993%2C1221718..1221772%2C1221470..1221535));owner=coffea | |
| 25939 chr1 manual_curation exon 36029656 36029794 . + . Parent=GSCOCT00016111001 | |
| 25940 chr1 manual_curation exon 36029419 36029473 . + . Parent=GSCOCT00016111001 | |
| 25941 chr1 manual_curation exon 36029198 36029280 . + . Parent=GSCOCT00016111001 | |
| 25942 chr1 manual_curation exon 36028746 36028827 . + . Parent=GSCOCT00016111001 | |
| 25943 chr1 manual_curation exon 36028487 36028630 . + . Parent=GSCOCT00016111001 | |
| 25944 chr1 manual_curation exon 36027995 36028078 . + . Parent=GSCOCT00016111001 | |
| 25945 chr1 manual_curation exon 36027347 36027421 . + . Parent=GSCOCT00016111001 | |
| 25946 chr1 manual_curation exon 36026199 36026286 . + . Parent=GSCOCT00016111001 | |
| 25947 chr1 manual_curation exon 36025601 36025658 . + . Parent=GSCOCT00016111001 | |
| 25948 chr1 manual_curation exon 36024333 36024598 . + . Parent=GSCOCT00016111001 | |
| 25949 chr1 manual_curation exon 36024092 36024239 . + . Parent=GSCOCT00016111001 | |
| 25950 chr1 manual_curation exon 36022899 36023133 . + . Parent=GSCOCT00016111001 | |
| 25951 chr1 manual_curation exon 36022059 36022233 . + . Parent=GSCOCT00016111001 | |
| 25952 chr1 manual_curation exon 36021735 36021885 . + . Parent=GSCOCT00016111001 | |
| 25953 chr1 manual_curation exon 36021094 36021167 . + . Parent=GSCOCT00016111001 | |
| 25954 chr1 manual_curation exon 36019888 36020255 . + . Parent=GSCOCT00016111001 | |
| 25955 chr1 manual_curation exon 36019494 36019758 . + . Parent=GSCOCT00016111001 | |
| 25956 chr1 manual_curation exon 36019083 36019224 . + . Parent=GSCOCT00016111001 | |
| 25957 chr1 manual_curation exon 36018886 36018991 . + . Parent=GSCOCT00016111001 | |
| 25958 chr1 manual_curation exon 36017823 36018078 . + . Parent=GSCOCT00016111001 | |
| 25959 chr1 manual_curation exon 36016879 36017346 . + . Parent=GSCOCT00016111001 | |
| 25960 chr1 manual_curation CDS 36029656 36029721 . + 0 Parent=GSCOCT00016111001 | |
| 25961 chr1 manual_curation CDS 36029419 36029473 . + 2 Parent=GSCOCT00016111001 | |
| 25962 chr1 manual_curation CDS 36029198 36029280 . + 0 Parent=GSCOCT00016111001 | |
| 25963 chr1 manual_curation CDS 36028746 36028827 . + 2 Parent=GSCOCT00016111001 | |
| 25964 chr1 manual_curation CDS 36028487 36028630 . + 2 Parent=GSCOCT00016111001 | |
| 25965 chr1 manual_curation CDS 36027995 36028078 . + 2 Parent=GSCOCT00016111001 | |
| 25966 chr1 manual_curation CDS 36027347 36027421 . + 2 Parent=GSCOCT00016111001 | |
| 25967 chr1 manual_curation CDS 36026199 36026286 . + 1 Parent=GSCOCT00016111001 | |
| 25968 chr1 manual_curation CDS 36025601 36025658 . + 0 Parent=GSCOCT00016111001 | |
| 25969 chr1 manual_curation CDS 36024333 36024598 . + 1 Parent=GSCOCT00016111001 | |
| 25970 chr1 manual_curation CDS 36024092 36024239 . + 0 Parent=GSCOCT00016111001 | |
| 25971 chr1 manual_curation CDS 36022899 36023133 . + 2 Parent=GSCOCT00016111001 | |
| 25972 chr1 manual_curation CDS 36022059 36022233 . + 1 Parent=GSCOCT00016111001 | |
| 25973 chr1 manual_curation CDS 36021735 36021885 . + 0 Parent=GSCOCT00016111001 | |
| 25974 chr1 manual_curation CDS 36021094 36021167 . + 1 Parent=GSCOCT00016111001 | |
| 25975 chr1 manual_curation CDS 36019888 36020255 . + 2 Parent=GSCOCT00016111001 | |
| 25976 chr1 manual_curation CDS 36019494 36019758 . + 1 Parent=GSCOCT00016111001 | |
| 25977 chr1 manual_curation CDS 36019083 36019224 . + 0 Parent=GSCOCT00016111001 | |
| 25978 chr1 manual_curation CDS 36018886 36018991 . + 2 Parent=GSCOCT00016111001 | |
| 25979 chr1 manual_curation CDS 36017823 36018078 . + 1 Parent=GSCOCT00016111001 | |
| 25980 chr1 manual_curation CDS 36017055 36017346 . + 0 Parent=GSCOCT00016111001 | |
| 25981 chr1 manual_curation gene 36031137 36034639 . - . ID=GSCOCG00016109001;Name=Cc01_g19040 | |
| 25982 chr1 manual_curation mRNA 36031137 36034639 . - . ID=GSCOCT00016109001;Parent=GSCOCG00016109001;Name=Cc01_g19040 | |
| 25983 chr1 manual_curation polypeptide 36031803 36033725 . - . ID=GSCOCP00016109001;Dbxref=GENE3D:G3DSA:3.60.40.10,InterPro:IPR000222,InterPro:IPR001932,InterPro:IPR014045,InterPro:IPR015655,PANTHER:PTHR13832,PFAM:PF00481,PROSITE:PS01032,SMART:SM00332,SUPERFAMILY:SSF81606,SwissProt:A3CCP9,SwissProt:Q93YS2,SwissProt:Q9M1V8,TAIR:AT3G63320.1,TAIR:AT3G63340.2,TAIR:AT4G31750.1,TrEMBL:B9S4N3,TrEMBL:D7T3F9,TrEMBL:F6HBI1;Derives_from=GSCOCT00016109001;Name=Cc01_g19040;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004722,GO:0006470,GO:0008287,CC_EC_number:3.1.3.16,PRODUCT:Putative Probable protein phosphatase 2C 51,CC_functional_completeness:fragment,CC_gene:At3g63340,CC_gene:Os11g0586001,CC_gene:At3g63320;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016109001~ Putative Probable protein phosphatase 2C 51~ At3g63340~ fragment;original_location=join(1217466..1217664%2C1217889..1218084%2C1218202..1218307%2C1218387..1218528%2C1218669..1218843%2C1219094..1219388);owner=coffea | |
| 25984 chr1 manual_curation exon 36033527 36034639 . - . Parent=GSCOCT00016109001 | |
| 25985 chr1 manual_curation exon 36033107 36033302 . - . Parent=GSCOCT00016109001 | |
| 25986 chr1 manual_curation exon 36032884 36032989 . - . Parent=GSCOCT00016109001 | |
| 25987 chr1 manual_curation exon 36032663 36032804 . - . Parent=GSCOCT00016109001 | |
| 25988 chr1 manual_curation exon 36032348 36032522 . - . Parent=GSCOCT00016109001 | |
| 25989 chr1 manual_curation exon 36031137 36032097 . - . Parent=GSCOCT00016109001 | |
| 25990 chr1 manual_curation CDS 36033527 36033725 . - 0 Parent=GSCOCT00016109001 | |
| 25991 chr1 manual_curation CDS 36033107 36033302 . - 1 Parent=GSCOCT00016109001 | |
| 25992 chr1 manual_curation CDS 36032884 36032989 . - 2 Parent=GSCOCT00016109001 | |
| 25993 chr1 manual_curation CDS 36032663 36032804 . - 0 Parent=GSCOCT00016109001 | |
| 25994 chr1 manual_curation CDS 36032348 36032522 . - 1 Parent=GSCOCT00016109001 | |
| 25995 chr1 manual_curation CDS 36031803 36032097 . - 2 Parent=GSCOCT00016109001 | |
| 25996 chr1 manual_curation gene 36035275 36041227 . - . ID=GSCOCG00016108001;Name=Cc01_g19050 | |
| 25997 chr1 manual_curation mRNA 36035275 36041227 . - . ID=GSCOCT00016108001;Parent=GSCOCG00016108001;Name=Cc01_g19050 | |
| 25998 chr1 manual_curation polypeptide 36035654 36040333 . - . ID=GSCOCP00016108001;Dbxref=GENE3D:G3DSA:1.25.40.10,GENE3D:G3DSA:3.30.710.10,InterPro:IPR001440,InterPro:IPR011333,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR019734,PFAM:PF00515,PROFILE:PS50005,PROFILE:PS50293,SMART:SM00028,SUPERFAMILY:SSF54695,SwissProt:O65020,SwissProt:Q9LV01,SwissProt:Q9ZQX6,TAIR:AT3G51770.2,TAIR:AT4G02680.1,TAIR:AT5G58550.1,TrEMBL:D7T3F8,TrEMBL:Q0QW06,TrEMBL:Q4F8Q5;Derives_from=GSCOCT00016108001;Name=Cc01_g19050;Ontology_term=CC_evidence_code:ISS,GO:0005488,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:ETO1-like protein 1,CC_functional_completeness:complete,CC_gene:EOL1,CC_gene:ETO1,CC_gene:EOL2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016108001~ ETO1-like protein 1~ EOL1~ complete;original_location=join(1210858..1210982%2C1211078..1212790%2C1213596..1213887%2C1214636..1214945%2C1215317..1215537);owner=coffea | |
| 25999 chr1 manual_curation exon 36040209 36041227 . - . Parent=GSCOCT00016108001 | |
| 26000 chr1 manual_curation exon 36038401 36040113 . - . Parent=GSCOCT00016108001 | |
| 26001 chr1 manual_curation exon 36037304 36037595 . - . Parent=GSCOCT00016108001 | |
| 26002 chr1 manual_curation exon 36036246 36036555 . - . Parent=GSCOCT00016108001 | |
| 26003 chr1 manual_curation exon 36035275 36035874 . - . Parent=GSCOCT00016108001 | |
| 26004 chr1 manual_curation CDS 36040209 36040333 . - 0 Parent=GSCOCT00016108001 | |
| 26005 chr1 manual_curation CDS 36038401 36040113 . - 2 Parent=GSCOCT00016108001 | |
| 26006 chr1 manual_curation CDS 36037304 36037595 . - 2 Parent=GSCOCT00016108001 | |
| 26007 chr1 manual_curation CDS 36036246 36036555 . - 0 Parent=GSCOCT00016108001 | |
| 26008 chr1 manual_curation CDS 36035654 36035874 . - 1 Parent=GSCOCT00016108001 | |
| 26009 chr1 manual_curation gene 36047060 36052578 . - . ID=GSCOCG00016107001;Name=Cc01_g19060 | |
| 26010 chr1 manual_curation mRNA 36047060 36052578 . - . ID=GSCOCT00016107001;Parent=GSCOCG00016107001;Name=Cc01_g19060 | |
| 26011 chr1 manual_curation polypeptide 36048449 36052348 . - . ID=GSCOCP00016107001;Dbxref=InterPro:IPR010399,InterPro:IPR018467,PFAM:PF06200,PFAM:PF09425,PROFILE:PS51320,SwissProt:Q7XA73,SwissProt:Q8GY55,TAIR:AT4G14713.1,TAIR:AT4G14720.1,TrEMBL:B9H8D0,TrEMBL:D7T3F7,TrEMBL:D7T736;Derives_from=GSCOCT00016107001;Name=Cc01_g19060;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein TIFY 4B,CC_functional_completeness:complete,CC_gene:TIFY4B,CC_gene:TIFY4A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016107001~ Putative Protein TIFY 4B~ TIFY4B~ complete;original_location=join(1198843..1198960%2C1199154..1199347%2C1199580..1199719%2C1200666..1200756%2C1200847..1201006%2C1201306..1201368%2C1202351..1202408%2C1202505..1202742);owner=coffea | |
| 26012 chr1 manual_curation exon 36052231 36052578 . - . Parent=GSCOCT00016107001 | |
| 26013 chr1 manual_curation exon 36051844 36052037 . - . Parent=GSCOCT00016107001 | |
| 26014 chr1 manual_curation exon 36051472 36051611 . - . Parent=GSCOCT00016107001 | |
| 26015 chr1 manual_curation exon 36050435 36050525 . - . Parent=GSCOCT00016107001 | |
| 26016 chr1 manual_curation exon 36050185 36050344 . - . Parent=GSCOCT00016107001 | |
| 26017 chr1 manual_curation exon 36049823 36049885 . - . Parent=GSCOCT00016107001 | |
| 26018 chr1 manual_curation exon 36048783 36048840 . - . Parent=GSCOCT00016107001 | |
| 26019 chr1 manual_curation exon 36047060 36048686 . - . Parent=GSCOCT00016107001 | |
| 26020 chr1 manual_curation CDS 36052231 36052348 . - 0 Parent=GSCOCT00016107001 | |
| 26021 chr1 manual_curation CDS 36051844 36052037 . - 1 Parent=GSCOCT00016107001 | |
| 26022 chr1 manual_curation CDS 36051472 36051611 . - 0 Parent=GSCOCT00016107001 | |
| 26023 chr1 manual_curation CDS 36050435 36050525 . - 2 Parent=GSCOCT00016107001 | |
| 26024 chr1 manual_curation CDS 36050185 36050344 . - 0 Parent=GSCOCT00016107001 | |
| 26025 chr1 manual_curation CDS 36049823 36049885 . - 1 Parent=GSCOCT00016107001 | |
| 26026 chr1 manual_curation CDS 36048783 36048840 . - 1 Parent=GSCOCT00016107001 | |
| 26027 chr1 manual_curation CDS 36048449 36048686 . - 2 Parent=GSCOCT00016107001 | |
| 26028 chr1 manual_curation gene 36059374 36063147 . - . ID=GSCOCG00016106001;Name=Cc01_g19070 | |
| 26029 chr1 manual_curation mRNA 36059374 36063147 . - . ID=GSCOCT00016106001;Parent=GSCOCG00016106001;Name=Cc01_g19070 | |
| 26030 chr1 manual_curation polypeptide 36059504 36062804 . - . ID=GSCOCP00016106001;Dbxref=GENE3D:G3DSA:1.25.40.20,InterPro:IPR002110,InterPro:IPR020683,PROFILE:PS50297,SMART:SM00248,SUPERFAMILY:SSF48403,TAIR:AT3G18670.1,TAIR:AT5G04700.1,TAIR:AT5G35810.1,TrEMBL:A5B3N0,TrEMBL:A5B4A0,TrEMBL:B9RWH7;Derives_from=GSCOCT00016106001;Name=Cc01_g19070;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Ankyrin repeat family protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016106001~ Putative Ankyrin repeat family protein~ unknown_gene~ modules;original_location=join(1188387..1188597%2C1188828..1188977%2C1189150..1189299%2C1189530..1189607%2C1190018..1190131%2C1190222..1190428%2C1190629..1190975%2C1191076..1191687);owner=coffea | |
| 26031 chr1 manual_curation exon 36062594 36063147 . - . Parent=GSCOCT00016106001 | |
| 26032 chr1 manual_curation exon 36062214 36062363 . - . Parent=GSCOCT00016106001 | |
| 26033 chr1 manual_curation exon 36061892 36062041 . - . Parent=GSCOCT00016106001 | |
| 26034 chr1 manual_curation exon 36061584 36061661 . - . Parent=GSCOCT00016106001 | |
| 26035 chr1 manual_curation exon 36061060 36061173 . - . Parent=GSCOCT00016106001 | |
| 26036 chr1 manual_curation exon 36060763 36060969 . - . Parent=GSCOCT00016106001 | |
| 26037 chr1 manual_curation exon 36060216 36060562 . - . Parent=GSCOCT00016106001 | |
| 26038 chr1 manual_curation exon 36059374 36060115 . - . Parent=GSCOCT00016106001 | |
| 26039 chr1 manual_curation CDS 36062594 36062804 . - 0 Parent=GSCOCT00016106001 | |
| 26040 chr1 manual_curation CDS 36062214 36062363 . - 1 Parent=GSCOCT00016106001 | |
| 26041 chr1 manual_curation CDS 36061892 36062041 . - 1 Parent=GSCOCT00016106001 | |
| 26042 chr1 manual_curation CDS 36061584 36061661 . - 1 Parent=GSCOCT00016106001 | |
| 26043 chr1 manual_curation CDS 36061060 36061173 . - 1 Parent=GSCOCT00016106001 | |
| 26044 chr1 manual_curation CDS 36060763 36060969 . - 1 Parent=GSCOCT00016106001 | |
| 26045 chr1 manual_curation CDS 36060216 36060562 . - 1 Parent=GSCOCT00016106001 | |
| 26046 chr1 manual_curation CDS 36059504 36060115 . - 0 Parent=GSCOCT00016106001 | |
| 26047 chr1 manual_curation gene 36064086 36066108 . - . ID=GSCOCG00016105001;Name=Cc01_g19080 | |
| 26048 chr1 manual_curation mRNA 36064086 36066108 . - . ID=GSCOCT00016105001;Parent=GSCOCG00016105001;Name=Cc01_g19080 | |
| 26049 chr1 manual_curation polypeptide 36064588 36065935 . - . ID=GSCOCP00016105001;Dbxref=InterPro:IPR010821,PFAM:PF07224,SwissProt:O22527,SwissProt:Q94LX1,SwissProt:Q9M7I7,TAIR:AT1G19670.1,TAIR:AT5G43860.1,TrEMBL:F6HI72,TrEMBL:F6HI76,TrEMBL:I1L497;Derives_from=GSCOCT00016105001;Name=Cc01_g19080;Ontology_term=CC_evidence_code:ISS,CC_EC_number:3.1.1.14,PRODUCT:Putative Chlorophyllase-1,CC_functional_completeness:complete,CC_gene:CLH1,CC_gene:CLH2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016105001~ Putative Chlorophyllase-1~ CLH1~ complete;original_location=join(1185256..1185483%2C1185935..1186603);owner=coffea | |
| 26050 chr1 manual_curation exon 36065708 36066108 . - . Parent=GSCOCT00016105001 | |
| 26051 chr1 manual_curation exon 36064086 36065256 . - . Parent=GSCOCT00016105001 | |
| 26052 chr1 manual_curation CDS 36065708 36065935 . - 0 Parent=GSCOCT00016105001 | |
| 26053 chr1 manual_curation CDS 36064588 36065256 . - 0 Parent=GSCOCT00016105001 | |
| 26054 chr1 manual_curation gene 36069850 36071625 . + . ID=GSCOCG00016103001;Name=Cc01_g19090 | |
| 26055 chr1 manual_curation mRNA 36069850 36071625 . + . ID=GSCOCT00016103001;Parent=GSCOCG00016103001;Name=Cc01_g19090 | |
| 26056 chr1 manual_curation polypeptide 36069906 36071595 . + . ID=GSCOCP00016103001;Dbxref=InterPro:IPR006214,PANTHER:PTHR23291,PFAM:PF01027,SwissProt:O74888,SwissProt:Q94A20,SwissProt:Q9DA39,TAIR:AT1G03070.1,TAIR:AT3G63310.1,TAIR:AT4G02690.1,TrEMBL:B9GSJ5,TrEMBL:B9SFF7,TrEMBL:Q5F2L4;Derives_from=GSCOCT00016103001;Name=Cc01_g19090;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:BI1-like protein,CC_functional_completeness:complete,CC_gene:At4g15470,CC_gene:Tmbim4,CC_gene:bxi1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016103001~ BI1-like protein~ At4g15470~ complete;original_location=complement(join(1181036..1181285%2C1180743..1180856%2C1179901..1180058%2C1179596..1179802));owner=coffea | |
| 26057 chr1 manual_curation exon 36071389 36071625 . + . Parent=GSCOCT00016103001 | |
| 26058 chr1 manual_curation exon 36071133 36071290 . + . Parent=GSCOCT00016103001 | |
| 26059 chr1 manual_curation exon 36070335 36070448 . + . Parent=GSCOCT00016103001 | |
| 26060 chr1 manual_curation exon 36069850 36070155 . + . Parent=GSCOCT00016103001 | |
| 26061 chr1 manual_curation CDS 36071389 36071595 . + 0 Parent=GSCOCT00016103001 | |
| 26062 chr1 manual_curation CDS 36071133 36071290 . + 1 Parent=GSCOCT00016103001 | |
| 26063 chr1 manual_curation CDS 36070335 36070448 . + 1 Parent=GSCOCT00016103001 | |
| 26064 chr1 manual_curation CDS 36069906 36070155 . + 0 Parent=GSCOCT00016103001 | |
| 26065 chr1 manual_curation gene 36071680 36076131 . - . ID=GSCOCG00016102001;Name=Cc01_g19100 | |
| 26066 chr1 manual_curation mRNA 36071680 36076131 . - . ID=GSCOCT00016102001;Parent=GSCOCG00016102001;Name=Cc01_g19100 | |
| 26067 chr1 manual_curation polypeptide 36072591 36076021 . - . ID=GSCOCP00016102001;Dbxref=InterPro:IPR008546,InterPro:IPR013666,PFAM:PF05703,PFAM:PF08458,TAIR:AT3G22810.1,TAIR:AT3G63300.1,TAIR:AT4G14740.1,TrEMBL:A5BJ67,TrEMBL:D7TE14,TrEMBL:I1N9K2;Derives_from=GSCOCT00016102001;Name=Cc01_g19100;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016102001~ Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region~ unknown_gene~ complete;original_location=join(1175170..1175511%2C1175711..1175833%2C1177145..1177586%2C1177835..1178074%2C1178178..1178285%2C1178386..1178600);owner=coffea | |
| 26068 chr1 manual_curation exon 36075680 36076131 . - . Parent=GSCOCT00016102001 | |
| 26069 chr1 manual_curation exon 36075358 36075480 . - . Parent=GSCOCT00016102001 | |
| 26070 chr1 manual_curation exon 36073605 36074046 . - . Parent=GSCOCT00016102001 | |
| 26071 chr1 manual_curation exon 36073117 36073356 . - . Parent=GSCOCT00016102001 | |
| 26072 chr1 manual_curation exon 36072906 36073013 . - . Parent=GSCOCT00016102001 | |
| 26073 chr1 manual_curation exon 36071680 36072805 . - . Parent=GSCOCT00016102001 | |
| 26074 chr1 manual_curation CDS 36075680 36076021 . - 0 Parent=GSCOCT00016102001 | |
| 26075 chr1 manual_curation CDS 36075358 36075480 . - 0 Parent=GSCOCT00016102001 | |
| 26076 chr1 manual_curation CDS 36073605 36074046 . - 0 Parent=GSCOCT00016102001 | |
| 26077 chr1 manual_curation CDS 36073117 36073356 . - 1 Parent=GSCOCT00016102001 | |
| 26078 chr1 manual_curation CDS 36072906 36073013 . - 1 Parent=GSCOCT00016102001 | |
| 26079 chr1 manual_curation CDS 36072591 36072805 . - 1 Parent=GSCOCT00016102001 | |
| 26080 chr1 manual_curation gene 36080346 36081992 . - . ID=GSCOCG00016101001;Name=Cc01_g19110 | |
| 26081 chr1 manual_curation mRNA 36080346 36081992 . - . ID=GSCOCT00016101001;Parent=GSCOCG00016101001;Name=Cc01_g19110 | |
| 26082 chr1 manual_curation polypeptide 36080504 36081897 . - . ID=GSCOCP00016101001;Dbxref=TAIR:AT3G63290.1,TrEMBL:B9GSJ8,TrEMBL:F6HI68,TrEMBL:I1JF77;Derives_from=GSCOCT00016101001;Name=Cc01_g19110;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016101001~ 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein~ unknown_gene~ complete;original_location=join(1169294..1169569%2C1169677..1170687);owner=coffea | |
| 26083 chr1 manual_curation exon 36081622 36081992 . - . Parent=GSCOCT00016101001 | |
| 26084 chr1 manual_curation exon 36080346 36081514 . - . Parent=GSCOCT00016101001 | |
| 26085 chr1 manual_curation CDS 36081622 36081897 . - 0 Parent=GSCOCT00016101001 | |
| 26086 chr1 manual_curation CDS 36080504 36081514 . - 0 Parent=GSCOCT00016101001 | |
| 26087 chr1 manual_curation gene 36082473 36088118 . - . ID=GSCOCG00016100001;Name=Cc01_g19120 | |
| 26088 chr1 manual_curation mRNA 36082473 36088118 . - . ID=GSCOCT00016100001;Parent=GSCOCG00016100001;Name=Cc01_g19120 | |
| 26089 chr1 manual_curation polypeptide 36082941 36087135 . - . ID=GSCOCP00016100001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:A2ZMH2,SwissProt:Q2QMH1,SwissProt:Q9CAU7,TAIR:AT1G54510.1,TAIR:AT3G04810.1,TAIR:AT3G63280.1,TrEMBL:B9GSJ9,TrEMBL:B9SFG2,TrEMBL:F6HI67;Derives_from=GSCOCT00016100001;Name=Cc01_g19120;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Serine/threonine-protein kinase Nek2,CC_functional_completeness:complete,CC_gene:NEK2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016100001~ Serine/threonine-protein kinase Nek2~ NEK2~ complete;original_location=join(1164056..1164141%2C1164309..1164375%2C1164744..1164809%2C1164996..1165042%2C1165140..1165185%2C1165297..1165377%2C1165490..1165532%2C1165654..1165703%2C1165791..1165872%2C1165949..1165998%2C1166549..1166622%2C1166751..1166802%2C1167009..1167479%2C1167612..1168250);owner=coffea | |
| 26090 chr1 manual_curation exon 36087050 36088118 . - . Parent=GSCOCT00016100001 | |
| 26091 chr1 manual_curation exon 36086816 36086882 . - . Parent=GSCOCT00016100001 | |
| 26092 chr1 manual_curation exon 36086382 36086447 . - . Parent=GSCOCT00016100001 | |
| 26093 chr1 manual_curation exon 36086149 36086195 . - . Parent=GSCOCT00016100001 | |
| 26094 chr1 manual_curation exon 36086006 36086051 . - . Parent=GSCOCT00016100001 | |
| 26095 chr1 manual_curation exon 36085814 36085894 . - . Parent=GSCOCT00016100001 | |
| 26096 chr1 manual_curation exon 36085659 36085701 . - . Parent=GSCOCT00016100001 | |
| 26097 chr1 manual_curation exon 36085488 36085537 . - . Parent=GSCOCT00016100001 | |
| 26098 chr1 manual_curation exon 36085319 36085400 . - . Parent=GSCOCT00016100001 | |
| 26099 chr1 manual_curation exon 36085193 36085242 . - . Parent=GSCOCT00016100001 | |
| 26100 chr1 manual_curation exon 36084569 36084642 . - . Parent=GSCOCT00016100001 | |
| 26101 chr1 manual_curation exon 36084389 36084440 . - . Parent=GSCOCT00016100001 | |
| 26102 chr1 manual_curation exon 36083712 36084182 . - . Parent=GSCOCT00016100001 | |
| 26103 chr1 manual_curation exon 36082473 36083579 . - . Parent=GSCOCT00016100001 | |
| 26104 chr1 manual_curation CDS 36087050 36087135 . - 0 Parent=GSCOCT00016100001 | |
| 26105 chr1 manual_curation CDS 36086816 36086882 . - 2 Parent=GSCOCT00016100001 | |
| 26106 chr1 manual_curation CDS 36086382 36086447 . - 0 Parent=GSCOCT00016100001 | |
| 26107 chr1 manual_curation CDS 36086149 36086195 . - 0 Parent=GSCOCT00016100001 | |
| 26108 chr1 manual_curation CDS 36086006 36086051 . - 2 Parent=GSCOCT00016100001 | |
| 26109 chr1 manual_curation CDS 36085814 36085894 . - 0 Parent=GSCOCT00016100001 | |
| 26110 chr1 manual_curation CDS 36085659 36085701 . - 0 Parent=GSCOCT00016100001 | |
| 26111 chr1 manual_curation CDS 36085488 36085537 . - 1 Parent=GSCOCT00016100001 | |
| 26112 chr1 manual_curation CDS 36085319 36085400 . - 0 Parent=GSCOCT00016100001 | |
| 26113 chr1 manual_curation CDS 36085193 36085242 . - 1 Parent=GSCOCT00016100001 | |
| 26114 chr1 manual_curation CDS 36084569 36084642 . - 0 Parent=GSCOCT00016100001 | |
| 26115 chr1 manual_curation CDS 36084389 36084440 . - 2 Parent=GSCOCT00016100001 | |
| 26116 chr1 manual_curation CDS 36083712 36084182 . - 0 Parent=GSCOCT00016100001 | |
| 26117 chr1 manual_curation CDS 36082941 36083579 . - 0 Parent=GSCOCT00016100001 | |
| 26118 chr1 manual_curation gene 36099293 36105659 . + . ID=GSCOCG00016099001;Name=Cc01_g19130 | |
| 26119 chr1 manual_curation mRNA 36099293 36105659 . + . ID=GSCOCT00016099001;Parent=GSCOCG00016099001;Name=Cc01_g19130 | |
| 26120 chr1 manual_curation polypeptide 36099488 36105543 . + . ID=GSCOCP00016099001;Dbxref=GENE3D:G3DSA:3.30.750.24,InterPro:IPR001902,InterPro:IPR002645,InterPro:IPR011547,InterPro:IPR018045,PFAM:PF00916,PFAM:PF01740,PROFILE:PS50801,PROSITE:PS01130,SUPERFAMILY:SSF52091,SwissProt:O04289,SwissProt:Q9SV13,SwissProt:Q9SXS2,TAIR:AT1G23090.1,TAIR:AT3G51895.1,TAIR:AT4G02700.1,TIGRFAMs:TIGR00815,TrEMBL:B9H8C3,TrEMBL:D7TE10,TrEMBL:I1N9K0;Derives_from=GSCOCT00016099001;Name=Cc01_g19130;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006810,GO:0008271,GO:0008272,GO:0016020,GO:0016021,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Sulfate transporter 3.1,CC_functional_completeness:complete,CC_gene:SULTR3%3B1,CC_gene:SULTR3%3B2,CC_gene:SULTR3%3B3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016099001~ Sulfate transporter 3.1~ SULTR3%3B1~ complete;original_location=complement(join(1151379..1151703%2C1150844..1151051%2C1150195..1150366%2C1149992..1150057%2C1149299..1149412%2C1148466..1148582%2C1147803..1147929%2C1146715..1147001%2C1146397..1146587%2C1146193..1146278%2C1145983..1146059%2C1145648..1145836));owner=coffea | |
| 26121 chr1 manual_curation exon 36105355 36105659 . + . Parent=GSCOCT00016099001 | |
| 26122 chr1 manual_curation exon 36105132 36105208 . + . Parent=GSCOCT00016099001 | |
| 26123 chr1 manual_curation exon 36104913 36104998 . + . Parent=GSCOCT00016099001 | |
| 26124 chr1 manual_curation exon 36104604 36104794 . + . Parent=GSCOCT00016099001 | |
| 26125 chr1 manual_curation exon 36104190 36104476 . + . Parent=GSCOCT00016099001 | |
| 26126 chr1 manual_curation exon 36103262 36103388 . + . Parent=GSCOCT00016099001 | |
| 26127 chr1 manual_curation exon 36102609 36102725 . + . Parent=GSCOCT00016099001 | |
| 26128 chr1 manual_curation exon 36101779 36101892 . + . Parent=GSCOCT00016099001 | |
| 26129 chr1 manual_curation exon 36101134 36101199 . + . Parent=GSCOCT00016099001 | |
| 26130 chr1 manual_curation exon 36100825 36100996 . + . Parent=GSCOCT00016099001 | |
| 26131 chr1 manual_curation exon 36100140 36100347 . + . Parent=GSCOCT00016099001 | |
| 26132 chr1 manual_curation exon 36099293 36099812 . + . Parent=GSCOCT00016099001 | |
| 26133 chr1 manual_curation CDS 36105355 36105543 . + 0 Parent=GSCOCT00016099001 | |
| 26134 chr1 manual_curation CDS 36105132 36105208 . + 1 Parent=GSCOCT00016099001 | |
| 26135 chr1 manual_curation CDS 36104913 36104998 . + 2 Parent=GSCOCT00016099001 | |
| 26136 chr1 manual_curation CDS 36104604 36104794 . + 0 Parent=GSCOCT00016099001 | |
| 26137 chr1 manual_curation CDS 36104190 36104476 . + 1 Parent=GSCOCT00016099001 | |
| 26138 chr1 manual_curation CDS 36103262 36103388 . + 0 Parent=GSCOCT00016099001 | |
| 26139 chr1 manual_curation CDS 36102609 36102725 . + 0 Parent=GSCOCT00016099001 | |
| 26140 chr1 manual_curation CDS 36101779 36101892 . + 0 Parent=GSCOCT00016099001 | |
| 26141 chr1 manual_curation CDS 36101134 36101199 . + 0 Parent=GSCOCT00016099001 | |
| 26142 chr1 manual_curation CDS 36100825 36100996 . + 2 Parent=GSCOCT00016099001 | |
| 26143 chr1 manual_curation CDS 36100140 36100347 . + 1 Parent=GSCOCT00016099001 | |
| 26144 chr1 manual_curation CDS 36099488 36099812 . + 0 Parent=GSCOCT00016099001 | |
| 26145 chr1 manual_curation gene 36107929 36111697 . + . ID=GSCOCG00016098001;Name=Cc01_g19140 | |
| 26146 chr1 manual_curation mRNA 36107929 36111697 . + . ID=GSCOCT00016098001;Parent=GSCOCG00016098001;Name=Cc01_g19140 | |
| 26147 chr1 manual_curation polypeptide 36108055 36111269 . + . ID=GSCOCP00016098001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR020635,PFAM:PF07714,PRINTS:PR00109,PROFILE:PS50011,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q2MHE4,SwissProt:Q55GU0,SwissProt:Q7T6X2,TAIR:AT3G22750.1,TAIR:AT3G63260.1,TAIR:AT4G14780.1,TrEMBL:B9GSK4,TrEMBL:B9H8B9,TrEMBL:B9SFH0;Derives_from=GSCOCT00016098001;Name=Cc01_g19140;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.10.2,PRODUCT:Putative serine/threonine-protein kinase/receptor R826,CC_functional_completeness:fragment,CC_gene:HT1,CC_gene:DDB_G0267514,CC_gene:MIMI_R826;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016098001~ Putative serine/threonine-protein kinase/receptor R826~ HT1~ fragment;original_location=complement(join(1142806..1143136%2C1141389..1141510%2C1140902..1141110%2C1140509..1140683%2C1140247..1140381%2C1139922..1140128));owner=coffea | |
| 26148 chr1 manual_curation exon 36111063 36111697 . + . Parent=GSCOCT00016098001 | |
| 26149 chr1 manual_curation exon 36110810 36110944 . + . Parent=GSCOCT00016098001 | |
| 26150 chr1 manual_curation exon 36110508 36110682 . + . Parent=GSCOCT00016098001 | |
| 26151 chr1 manual_curation exon 36110081 36110289 . + . Parent=GSCOCT00016098001 | |
| 26152 chr1 manual_curation exon 36109681 36109802 . + . Parent=GSCOCT00016098001 | |
| 26153 chr1 manual_curation exon 36107929 36108385 . + . Parent=GSCOCT00016098001 | |
| 26154 chr1 manual_curation CDS 36111063 36111269 . + 0 Parent=GSCOCT00016098001 | |
| 26155 chr1 manual_curation CDS 36110810 36110944 . + 0 Parent=GSCOCT00016098001 | |
| 26156 chr1 manual_curation CDS 36110508 36110682 . + 2 Parent=GSCOCT00016098001 | |
| 26157 chr1 manual_curation CDS 36110081 36110289 . + 0 Parent=GSCOCT00016098001 | |
| 26158 chr1 manual_curation CDS 36109681 36109802 . + 1 Parent=GSCOCT00016098001 | |
| 26159 chr1 manual_curation CDS 36108055 36108385 . + 0 Parent=GSCOCT00016098001 | |
| 26160 chr1 manual_curation gene 36116121 36119974 . + . ID=GSCOCG00016097001;Name=Cc01_g19150 | |
| 26161 chr1 manual_curation mRNA 36116121 36119974 . + . ID=GSCOCT00016097001;Parent=GSCOCG00016097001;Name=Cc01_g19150 | |
| 26162 chr1 manual_curation polypeptide 36116400 36119974 . + . ID=GSCOCP00016097001;Dbxref=GENE3D:G3DSA:3.20.20.330,InterPro:IPR003726,PFAM:PF02574,PROFILE:PS50970,SUPERFAMILY:SSF82282,SwissProt:P56707,SwissProt:Q4VNK0,SwissProt:Q9M1W4,TAIR:AT3G22740.1,TAIR:AT3G25900.1,TAIR:AT3G63250.1,TrEMBL:B9GSK5,TrEMBL:B9H8B8,TrEMBL:B9SFH3;Derives_from=GSCOCT00016097001;Name=Cc01_g19150;Ontology_term=CC_evidence_code:ISS,GO:0008898,CC_EC_number:2.1.1.10,PRODUCT:Homocysteine S-methyltransferase 2,CC_functional_completeness:complete,CC_gene:HMT-2,CC_gene:SMTA,CC_gene:SMT;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016097001~ Homocysteine S-methyltransferase 2~ HMT-2~ complete;original_location=complement(join(1134594..1134791%2C1133904..1133960%2C1133580..1133809%2C1132857..1132986%2C1132508..1132711%2C1131684..1131755%2C1131217..1131363));owner=coffea | |
| 26163 chr1 manual_curation exon 36119828 36119974 . + . Parent=GSCOCT00016097001 | |
| 26164 chr1 manual_curation exon 36119436 36119507 . + . Parent=GSCOCT00016097001 | |
| 26165 chr1 manual_curation exon 36118480 36118683 . + . Parent=GSCOCT00016097001 | |
| 26166 chr1 manual_curation exon 36118205 36118334 . + . Parent=GSCOCT00016097001 | |
| 26167 chr1 manual_curation exon 36117382 36117611 . + . Parent=GSCOCT00016097001 | |
| 26168 chr1 manual_curation exon 36117231 36117287 . + . Parent=GSCOCT00016097001 | |
| 26169 chr1 manual_curation exon 36116121 36116597 . + . Parent=GSCOCT00016097001 | |
| 26170 chr1 manual_curation CDS 36119828 36119974 . + 0 Parent=GSCOCT00016097001 | |
| 26171 chr1 manual_curation CDS 36119436 36119507 . + 0 Parent=GSCOCT00016097001 | |
| 26172 chr1 manual_curation CDS 36118480 36118683 . + 0 Parent=GSCOCT00016097001 | |
| 26173 chr1 manual_curation CDS 36118205 36118334 . + 2 Parent=GSCOCT00016097001 | |
| 26174 chr1 manual_curation CDS 36117382 36117611 . + 0 Parent=GSCOCT00016097001 | |
| 26175 chr1 manual_curation CDS 36117231 36117287 . + 0 Parent=GSCOCT00016097001 | |
| 26176 chr1 manual_curation CDS 36116400 36116597 . + 0 Parent=GSCOCT00016097001 | |
| 26177 chr1 manual_curation gene 36120300 36121852 . - . ID=GSCOCG00016096001;Name=Cc01_g19160 | |
| 26178 chr1 manual_curation mRNA 36120300 36121852 . - . ID=GSCOCT00016096001;Parent=GSCOCG00016096001;Name=Cc01_g19160 | |
| 26179 chr1 manual_curation polypeptide 36120871 36121532 . - . ID=GSCOCP00016096001;Dbxref=TAIR:AT4G04614.1,TrEMBL:A5B813,TrEMBL:D7TE03,TrEMBL:I1JF84;Derives_from=GSCOCT00016096001;Name=Cc01_g19160;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B Has 35333 Blast hits to 34131 proteins in 2444 species,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016096001~ Putative unknown protein%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(1129659..1129824%2C1129920..1130320);owner=coffea | |
| 26180 chr1 manual_curation exon 36121672 36121852 . - . Parent=GSCOCT00016096001 | |
| 26181 chr1 manual_curation exon 36121367 36121550 . - . Parent=GSCOCT00016096001 | |
| 26182 chr1 manual_curation exon 36120300 36121271 . - . Parent=GSCOCT00016096001 | |
| 26183 chr1 manual_curation CDS 36121367 36121532 . - 0 Parent=GSCOCT00016096001 | |
| 26184 chr1 manual_curation CDS 36120871 36121271 . - 1 Parent=GSCOCT00016096001 | |
| 26185 chr1 manual_curation gene 36123535 36124264 . - . ID=GSCOCG00016095001;Name=Cc01_g19170 | |
| 26186 chr1 manual_curation mRNA 36123535 36124264 . - . ID=GSCOCT00016095001;Parent=GSCOCG00016095001;Name=Cc01_g19170 | |
| 26187 chr1 manual_curation polypeptide 36123535 36124264 . - . ID=GSCOCP00016095001;Dbxref=InterPro:IPR000730,InterPro:IPR022648,InterPro:IPR022649,InterPro:IPR022659,PANTHER:PTHR11352,PFAM:PF00705,PFAM:PF02747,PRINTS:PR00339,PROSITE:PS00293,SwissProt:O82134,SwissProt:O82797,SwissProt:Q00268,TAIR:AT1G07370.1,TAIR:AT2G29570.1,TIGRFAMs:TIGR00590,TrEMBL:B9S374,TrEMBL:Q8H0Q1,TrEMBL:Q9FUI4;Derives_from=GSCOCT00016095001;Name=Cc01_g19170;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0006275,GO:0030337,GO:0043626,CC_EC_number:missing_EC_number,PRODUCT:Proliferating cell nuclear antigen,CC_functional_completeness:complete,CC_gene:PCNA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016095001~ Proliferating cell nuclear antigen~ PCNA~ complete;original_location=join(1126927..1127447%2C1127551..1127656);owner=coffea | |
| 26188 chr1 manual_curation exon 36123744 36124264 . - . Parent=GSCOCT00016095001 | |
| 26189 chr1 manual_curation exon 36123535 36123640 . - . Parent=GSCOCT00016095001 | |
| 26190 chr1 manual_curation CDS 36123744 36124264 . - 0 Parent=GSCOCT00016095001 | |
| 26191 chr1 manual_curation CDS 36123535 36123640 . - 2 Parent=GSCOCT00016095001 | |
| 26192 chr1 manual_curation gene 36125211 36126231 . + . ID=GSCOCG00016094001;Name=Cc01_g19180 | |
| 26193 chr1 manual_curation mRNA 36125211 36126231 . + . ID=GSCOCT00016094001;Parent=GSCOCG00016094001;Name=Cc01_g19180 | |
| 26194 chr1 manual_curation polypeptide 36125211 36125675 . + . ID=GSCOCP00016094001;Dbxref=GENE3D:G3DSA:2.40.50.140,InterPro:IPR004365,InterPro:IPR012340,InterPro:IPR016027,PFAM:PF01336,SUPERFAMILY:SSF50249,SwissProt:Q9LMK5,TAIR:AT1G07130.1,TrEMBL:A5B811,TrEMBL:B9H8B6,TrEMBL:B9SFH6;Derives_from=GSCOCT00016094001;Name=Cc01_g19180;Ontology_term=CC_evidence_code:ISS,GO:0003676,CC_EC_number:missing_EC_number,PRODUCT:CST complex subunit STN1,CC_functional_completeness:complete,CC_gene:STN1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016094001~ CST complex subunit STN1~ STN1~ complete;original_location=complement(1125516..1125980);owner=coffea | |
| 26195 chr1 manual_curation exon 36125211 36126231 . + . Parent=GSCOCT00016094001 | |
| 26196 chr1 manual_curation CDS 36125211 36125675 . + 0 Parent=GSCOCT00016094001 | |
| 26197 chr1 manual_curation gene 36129948 36132360 . + . ID=GSCOCG00016092001;Name=Cc01_g19190 | |
| 26198 chr1 manual_curation mRNA 36129948 36132360 . + . ID=GSCOCT00016092001;Parent=GSCOCG00016092001;Name=Cc01_g19190 | |
| 26199 chr1 manual_curation polypeptide 36129982 36132360 . + . ID=GSCOCP00016092001;Dbxref=InterPro:IPR000300,InterPro:IPR005135,PFAM:PF03372,SMART:SM00128,SUPERFAMILY:SSF56219,SwissProt:Q84MA2,SwissProt:Q9FUR2,SwissProt:Q9LR47,TAIR:AT1G05470.1,TAIR:AT2G32010.1,TAIR:AT3G63240.1,TrEMBL:A5B809,TrEMBL:B9SFH8,TrEMBL:F6HI59;Derives_from=GSCOCT00016092001;Name=Cc01_g19190;Ontology_term=CC_evidence_code:ISS,GO:0004437,CC_EC_number:3.1.3.56,PRODUCT:Type I inositol 1%2C4%2C5-trisphosphate 5-phosphatase CVP2,CC_functional_completeness:fragment,CC_gene:CVP2,CC_gene:IP5P1,CC_gene:IP5P2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016092001~ Type I inositol 1%2C4%2C5-trisphosphate 5-phosphatase CVP2~ CVP2~ fragment;original_location=complement(join(1121180..1121209%2C1120978..1121065%2C1120544..1120612%2C1120302..1120389%2C1120108..1120212%2C1119378..1120002%2C1119091..1119284%2C1118831..1118963));owner=coffea | |
| 26200 chr1 manual_curation exon 36132228 36132360 . + . Parent=GSCOCT00016092001 | |
| 26201 chr1 manual_curation exon 36131907 36132100 . + . Parent=GSCOCT00016092001 | |
| 26202 chr1 manual_curation exon 36131189 36131813 . + . Parent=GSCOCT00016092001 | |
| 26203 chr1 manual_curation exon 36130979 36131083 . + . Parent=GSCOCT00016092001 | |
| 26204 chr1 manual_curation exon 36130802 36130889 . + . Parent=GSCOCT00016092001 | |
| 26205 chr1 manual_curation exon 36130579 36130647 . + . Parent=GSCOCT00016092001 | |
| 26206 chr1 manual_curation exon 36130126 36130213 . + . Parent=GSCOCT00016092001 | |
| 26207 chr1 manual_curation exon 36129948 36130011 . + . Parent=GSCOCT00016092001 | |
| 26208 chr1 manual_curation CDS 36132228 36132360 . + 2 Parent=GSCOCT00016092001 | |
| 26209 chr1 manual_curation CDS 36131907 36132100 . + 0 Parent=GSCOCT00016092001 | |
| 26210 chr1 manual_curation CDS 36131189 36131813 . + 2 Parent=GSCOCT00016092001 | |
| 26211 chr1 manual_curation CDS 36130979 36131083 . + 2 Parent=GSCOCT00016092001 | |
| 26212 chr1 manual_curation CDS 36130802 36130889 . + 1 Parent=GSCOCT00016092001 | |
| 26213 chr1 manual_curation CDS 36130579 36130647 . + 1 Parent=GSCOCT00016092001 | |
| 26214 chr1 manual_curation CDS 36130126 36130213 . + 0 Parent=GSCOCT00016092001 | |
| 26215 chr1 manual_curation CDS 36129982 36130011 . + 0 Parent=GSCOCT00016092001 | |
| 26216 chr1 manual_curation gene 36132455 36132917 . + . ID=GSCOCG00016091001;Name=Cc01_g19200 | |
| 26217 chr1 manual_curation mRNA 36132455 36132917 . + . ID=GSCOCT00016091001;Parent=GSCOCG00016091001;Name=Cc01_g19200 | |
| 26218 chr1 manual_curation polypeptide 36132455 36132917 . + . ID=GSCOCP00016091001;Derives_from=GSCOCT00016091001;Name=Cc01_g19200;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016091001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1118622..1118736%2C1118274..1118377));owner=coffea | |
| 26219 chr1 manual_curation exon 36132814 36132917 . + . Parent=GSCOCT00016091001 | |
| 26220 chr1 manual_curation exon 36132455 36132569 . + . Parent=GSCOCT00016091001 | |
| 26221 chr1 manual_curation CDS 36132814 36132917 . + 1 Parent=GSCOCT00016091001 | |
| 26222 chr1 manual_curation CDS 36132455 36132569 . + 0 Parent=GSCOCT00016091001 | |
| 26223 chr1 manual_curation gene 36133003 36133274 . + . ID=GSCOCG00016090001;Name=Cc01_g19210 | |
| 26224 chr1 manual_curation mRNA 36133003 36133274 . + . ID=GSCOCT00016090001;Parent=GSCOCG00016090001;Name=Cc01_g19210 | |
| 26225 chr1 manual_curation polypeptide 36133003 36133214 . + . ID=GSCOCP00016090001;Derives_from=GSCOCT00016090001;Name=Cc01_g19210;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016090001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1118133..1118188%2C1117977..1118049));owner=coffea | |
| 26226 chr1 manual_curation exon 36133142 36133274 . + . Parent=GSCOCT00016090001 | |
| 26227 chr1 manual_curation exon 36133003 36133058 . + . Parent=GSCOCT00016090001 | |
| 26228 chr1 manual_curation CDS 36133142 36133214 . + 2 Parent=GSCOCT00016090001 | |
| 26229 chr1 manual_curation CDS 36133003 36133058 . + 0 Parent=GSCOCT00016090001 | |
| 26230 chr1 manual_curation gene 36133329 36134350 . + . ID=GSCOCG00016089001;Name=Cc01_g19220 | |
| 26231 chr1 manual_curation mRNA 36133329 36134350 . + . ID=GSCOCT00016089001;Parent=GSCOCG00016089001;Name=Cc01_g19220 | |
| 26232 chr1 manual_curation polypeptide 36133329 36134115 . + . ID=GSCOCP00016089001;Derives_from=GSCOCT00016089001;Name=Cc01_g19220;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016089001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1117802..1117862%2C1117325..1117478%2C1117076..1117115));owner=coffea | |
| 26233 chr1 manual_curation exon 36134076 36134350 . + . Parent=GSCOCT00016089001 | |
| 26234 chr1 manual_curation exon 36133713 36133866 . + . Parent=GSCOCT00016089001 | |
| 26235 chr1 manual_curation exon 36133329 36133389 . + . Parent=GSCOCT00016089001 | |
| 26236 chr1 manual_curation CDS 36134076 36134115 . + 2 Parent=GSCOCT00016089001 | |
| 26237 chr1 manual_curation CDS 36133713 36133866 . + 1 Parent=GSCOCT00016089001 | |
| 26238 chr1 manual_curation CDS 36133329 36133389 . + 0 Parent=GSCOCT00016089001 | |
| 26239 chr1 manual_curation gene 36145228 36146964 . - . ID=GSCOCG00016088001;Name=Cc01_g19230 | |
| 26240 chr1 manual_curation mRNA 36145228 36146964 . - . ID=GSCOCT00016088001;Parent=GSCOCG00016088001;Name=Cc01_g19230 | |
| 26241 chr1 manual_curation polypeptide 36145228 36146964 . - . ID=GSCOCP00016088001;Dbxref=InterPro:IPR003612,InterPro:IPR016140,PFAM:PF00234,SUPERFAMILY:SSF47699,TAIR:AT1G05450.2,TAIR:AT2G48140.1,TAIR:AT3G22620.1,TrEMBL:B9SFI6,TrEMBL:F6HI52,TrEMBL:Q94AX3;Derives_from=GSCOCT00016088001;Name=Cc01_g19230;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016088001~ Putative Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein~ unknown_gene~ complete;original_location=join(1104227..1104557%2C1104738..1104764%2C1105609..1105668%2C1105749..1105963);owner=coffea | |
| 26242 chr1 manual_curation exon 36146634 36146964 . - . Parent=GSCOCT00016088001 | |
| 26243 chr1 manual_curation exon 36146427 36146453 . - . Parent=GSCOCT00016088001 | |
| 26244 chr1 manual_curation exon 36145523 36145582 . - . Parent=GSCOCT00016088001 | |
| 26245 chr1 manual_curation exon 36145228 36145442 . - . Parent=GSCOCT00016088001 | |
| 26246 chr1 manual_curation CDS 36146634 36146964 . - 0 Parent=GSCOCT00016088001 | |
| 26247 chr1 manual_curation CDS 36146427 36146453 . - 1 Parent=GSCOCT00016088001 | |
| 26248 chr1 manual_curation CDS 36145523 36145582 . - 1 Parent=GSCOCT00016088001 | |
| 26249 chr1 manual_curation CDS 36145228 36145442 . - 1 Parent=GSCOCT00016088001 | |
| 26250 chr1 manual_curation gene 36150856 36151641 . + . ID=GSCOCG00016087001;Name=Cc01_g19240 | |
| 26251 chr1 manual_curation mRNA 36150856 36151641 . + . ID=GSCOCT00016087001;Parent=GSCOCG00016087001;Name=Cc01_g19240 | |
| 26252 chr1 manual_curation polypeptide 36150856 36151641 . + . ID=GSCOCP00016087001;Dbxref=GENE3D:G3DSA:1.10.110.10,InterPro:IPR000528,InterPro:IPR003612,InterPro:IPR013770,InterPro:IPR016140,PFAM:PF00234,PRINTS:PR00382,SMART:SM00499,SUPERFAMILY:SSF47699,SwissProt:Q9ZQI8,TAIR:AT2G48130.1,TAIR:AT3G22600.1,TAIR:AT4G14815.1,TrEMBL:B9SFJ0,TrEMBL:C6SY68,TrEMBL:I1L857;Derives_from=GSCOCT00016087001;Name=Cc01_g19240;Ontology_term=CC_evidence_code:ISS,GO:0006869,GO:0008289,CC_EC_number:missing_EC_number,PRODUCT:Putative Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein,CC_functional_completeness:complete,CC_gene:At2g13820;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016087001~ Putative Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein~ At2g13820~ complete;original_location=complement(join(1100035..1100335%2C1099824..1099937%2C1099550..1099680));owner=coffea | |
| 26253 chr1 manual_curation exon 36151511 36151641 . + . Parent=GSCOCT00016087001 | |
| 26254 chr1 manual_curation exon 36151254 36151367 . + . Parent=GSCOCT00016087001 | |
| 26255 chr1 manual_curation exon 36150856 36151156 . + . Parent=GSCOCT00016087001 | |
| 26256 chr1 manual_curation CDS 36151511 36151641 . + 1 Parent=GSCOCT00016087001 | |
| 26257 chr1 manual_curation CDS 36151254 36151367 . + 1 Parent=GSCOCT00016087001 | |
| 26258 chr1 manual_curation CDS 36150856 36151156 . + 0 Parent=GSCOCT00016087001 | |
| 26259 chr1 manual_curation gene 36153845 36154775 . + . ID=GSCOCG00016086001;Name=Cc01_g19250 | |
| 26260 chr1 manual_curation mRNA 36153845 36154775 . + . ID=GSCOCT00016086001;Parent=GSCOCG00016086001;Name=Cc01_g19250 | |
| 26261 chr1 manual_curation polypeptide 36153845 36154775 . + . ID=GSCOCP00016086001;Dbxref=GENE3D:G3DSA:1.10.110.10,InterPro:IPR000528,InterPro:IPR003612,InterPro:IPR013770,InterPro:IPR016140,PFAM:PF00234,PRINTS:PR00382,SMART:SM00499,SUPERFAMILY:SSF47699,SwissProt:Q9ZQI8,TAIR:AT1G03103.1,TAIR:AT2G48130.1,TAIR:AT3G22600.1,TrEMBL:B9SFJ0,TrEMBL:D7TDZ0,TrEMBL:I1L857;Derives_from=GSCOCT00016086001;Name=Cc01_g19250;Ontology_term=CC_evidence_code:ISS,GO:0006869,GO:0008289,CC_EC_number:missing_EC_number,PRODUCT:Putative Non-specific lipid-transfer protein-like protein At2g13820,CC_functional_completeness:complete,CC_gene:At2g13820;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016086001~ Putative Non-specific lipid-transfer protein-like protein At2g13820~ At2g13820~ complete;original_location=complement(join(1097016..1097346%2C1096804..1096911%2C1096416..1096534));owner=coffea | |
| 26262 chr1 manual_curation exon 36154657 36154775 . + . Parent=GSCOCT00016086001 | |
| 26263 chr1 manual_curation exon 36154280 36154387 . + . Parent=GSCOCT00016086001 | |
| 26264 chr1 manual_curation exon 36153845 36154175 . + . Parent=GSCOCT00016086001 | |
| 26265 chr1 manual_curation CDS 36154657 36154775 . + 1 Parent=GSCOCT00016086001 | |
| 26266 chr1 manual_curation CDS 36154280 36154387 . + 1 Parent=GSCOCT00016086001 | |
| 26267 chr1 manual_curation CDS 36153845 36154175 . + 0 Parent=GSCOCT00016086001 | |
| 26268 chr1 manual_curation gene 36160012 36164943 . + . ID=GSCOCG00016085001;Name=Cc01_g19260 | |
| 26269 chr1 manual_curation mRNA 36160012 36164943 . + . ID=GSCOCT00016085001;Parent=GSCOCG00016085001;Name=Cc01_g19260 | |
| 26270 chr1 manual_curation polypeptide 36163488 36164531 . + . ID=GSCOCP00016085001;Dbxref=GENE3D:G3DSA:2.120.10.80,InterPro:IPR001810,InterPro:IPR006652,InterPro:IPR011043,InterPro:IPR013089,InterPro:IPR015915,PANTHER:PTHR23230,PFAM:PF00646,PFAM:PF01344,SMART:SM00256,SMART:SM00612,SUPERFAMILY:SSF50965,SwissProt:Q0WW40,SwissProt:Q93W93,SwissProt:Q9M1W7,TAIR:AT1G16250.1,TAIR:AT1G55270.1,TAIR:AT3G63220.2,TrEMBL:A9PAC1,TrEMBL:B9GSL6,TrEMBL:B9SFJ2;Derives_from=GSCOCT00016085001;Name=Cc01_g19260;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:F-box/kelch-repeat protein SKIP30,CC_functional_completeness:complete,CC_gene:SKIP30,CC_gene:At1g16250,CC_gene:At1g55270;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016085001~ F-box/kelch-repeat protein SKIP30~ SKIP30~ complete;original_location=complement(1086660..1087703);owner=coffea | |
| 26271 chr1 manual_curation exon 36161409 36161851 . + . Parent=GSCOCT00016085001 | |
| 26272 chr1 manual_curation exon 36160012 36160227 . + . Parent=GSCOCT00016085001 | |
| 26273 chr1 manual_curation exon 36163433 36164943 . + . Parent=GSCOCT00016085001 | |
| 26274 chr1 manual_curation CDS 36163488 36164531 . + 0 Parent=GSCOCT00016085001 | |
| 26275 chr1 manual_curation gene 36165172 36168749 . + . ID=GSCOCG00016084001;Name=Cc01_g19270 | |
| 26276 chr1 manual_curation mRNA 36165172 36168749 . + . ID=GSCOCT00016084001;Parent=GSCOCG00016084001;Name=Cc01_g19270 | |
| 26277 chr1 manual_curation polypeptide 36165230 36168497 . + . ID=GSCOCP00016084001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019775,InterPro:IPR019781,InterPro:IPR019782,PFAM:PF00400,PROFILE:PS50082,PROFILE:PS50294,PROSITE:PS00678,SMART:SM00320,SUPERFAMILY:SSF50978,SwissProt:A4IGH4,SwissProt:Q54UI3,SwissProt:Q5FVB6,TAIR:AT1G03110.1,TrEMBL:B9H8A4,TrEMBL:B9SFJ3,TrEMBL:D7TDY8;Derives_from=GSCOCT00016084001;Name=Cc01_g19270;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative tRNA (guanine-N(7)-)-methyltransferase subunit WDR4,CC_functional_completeness:modules,CC_gene:wdr4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016084001~ Putative tRNA (guanine-N(7)-)-methyltransferase subunit WDR4~ wdr4~ modules;original_location=complement(join(1085828..1085961%2C1085537..1085722%2C1085203..1085383%2C1084870..1084926%2C1084677..1084747%2C1084159..1084237%2C1084001..1084060%2C1083576..1083679%2C1083414..1083474%2C1082694..1083089));owner=coffea | |
| 26278 chr1 manual_curation exon 36168102 36168749 . + . Parent=GSCOCT00016084001 | |
| 26279 chr1 manual_curation exon 36167717 36167777 . + . Parent=GSCOCT00016084001 | |
| 26280 chr1 manual_curation exon 36167512 36167615 . + . Parent=GSCOCT00016084001 | |
| 26281 chr1 manual_curation exon 36167131 36167190 . + . Parent=GSCOCT00016084001 | |
| 26282 chr1 manual_curation exon 36166954 36167032 . + . Parent=GSCOCT00016084001 | |
| 26283 chr1 manual_curation exon 36166444 36166514 . + . Parent=GSCOCT00016084001 | |
| 26284 chr1 manual_curation exon 36166265 36166321 . + . Parent=GSCOCT00016084001 | |
| 26285 chr1 manual_curation exon 36165808 36165988 . + . Parent=GSCOCT00016084001 | |
| 26286 chr1 manual_curation exon 36165469 36165654 . + . Parent=GSCOCT00016084001 | |
| 26287 chr1 manual_curation exon 36165172 36165363 . + . Parent=GSCOCT00016084001 | |
| 26288 chr1 manual_curation CDS 36168102 36168497 . + 0 Parent=GSCOCT00016084001 | |
| 26289 chr1 manual_curation CDS 36167717 36167777 . + 2 Parent=GSCOCT00016084001 | |
| 26290 chr1 manual_curation CDS 36167512 36167615 . + 0 Parent=GSCOCT00016084001 | |
| 26291 chr1 manual_curation CDS 36167131 36167190 . + 0 Parent=GSCOCT00016084001 | |
| 26292 chr1 manual_curation CDS 36166954 36167032 . + 2 Parent=GSCOCT00016084001 | |
| 26293 chr1 manual_curation CDS 36166444 36166514 . + 0 Parent=GSCOCT00016084001 | |
| 26294 chr1 manual_curation CDS 36166265 36166321 . + 0 Parent=GSCOCT00016084001 | |
| 26295 chr1 manual_curation CDS 36165808 36165988 . + 2 Parent=GSCOCT00016084001 | |
| 26296 chr1 manual_curation CDS 36165469 36165654 . + 2 Parent=GSCOCT00016084001 | |
| 26297 chr1 manual_curation CDS 36165230 36165363 . + 0 Parent=GSCOCT00016084001 | |
| 26298 chr1 manual_curation gene 36173851 36174660 . + . ID=GSCOCG00016082001;Name=Cc01_g19280 | |
| 26299 chr1 manual_curation mRNA 36173851 36174660 . + . ID=GSCOCT00016082001;Parent=GSCOCG00016082001;Name=Cc01_g19280 | |
| 26300 chr1 manual_curation polypeptide 36173851 36174660 . + . ID=GSCOCP00016082001;Dbxref=TAIR:AT3G22550.1,TAIR:AT3G63210.1,TAIR:AT5G11460.1,TrEMBL:B9GSL8,TrEMBL:B9RTP7,TrEMBL:D7TDY7;Derives_from=GSCOCT00016082001;Name=Cc01_g19280;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of unknown function (DUF581),CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016082001~ Putative Protein of unknown function (DUF581)~ unknown_gene~ fragment;original_location=complement(1076531..1077340);owner=coffea | |
| 26301 chr1 manual_curation exon 36173851 36174660 . + . Parent=GSCOCT00016082001 | |
| 26302 chr1 manual_curation CDS 36173851 36174660 . + 0 Parent=GSCOCT00016082001 | |
| 26303 chr1 manual_curation gene 36176874 36179886 . - . ID=GSCOCG00016080001;Name=Cc01_g19290 | |
| 26304 chr1 manual_curation mRNA 36176874 36179886 . - . ID=GSCOCT00016080001;Parent=GSCOCG00016080001;Name=Cc01_g19290 | |
| 26305 chr1 manual_curation polypeptide 36178534 36179196 . - . ID=GSCOCP00016080001;Dbxref=TAIR:AT4G02715.1,TrEMBL:B9GSL9,TrEMBL:B9H8A2,TrEMBL:F6HI49;Derives_from=GSCOCT00016080001;Name=Cc01_g19290;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B Has 30201 Blast hits to 17322 proteins in 780 species,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016080001~ Putative unknown protein%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ unknown_gene~ complete;original_location=1071995..1072657;owner=coffea | |
| 26306 chr1 manual_curation exon 36179624 36179886 . - . Parent=GSCOCT00016080001 | |
| 26307 chr1 manual_curation exon 36176874 36179490 . - . Parent=GSCOCT00016080001 | |
| 26308 chr1 manual_curation CDS 36178534 36179196 . - 0 Parent=GSCOCT00016080001 | |
| 26309 chr1 manual_curation gene 36186160 36186663 . + . ID=GSCOCG00016079001;Name=Cc01_g19300 | |
| 26310 chr1 manual_curation mRNA 36186160 36186663 . + . ID=GSCOCT00016079001;Parent=GSCOCG00016079001;Name=Cc01_g19300 | |
| 26311 chr1 manual_curation polypeptide 36186160 36186663 . + . ID=GSCOCP00016079001;Dbxref=TAIR:AT3G22530.1,TAIR:AT4G14830.1,TrEMBL:F6HDR2,TrEMBL:F6HI48,TrEMBL:I1LE40;Derives_from=GSCOCT00016079001;Name=Cc01_g19300;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016079001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14830.1)%3B Has 77 Blast hits to 77 proteins in 12 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 77%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(1064528..1065031);owner=coffea | |
| 26312 chr1 manual_curation exon 36186160 36186663 . + . Parent=GSCOCT00016079001 | |
| 26313 chr1 manual_curation CDS 36186160 36186663 . + 0 Parent=GSCOCT00016079001 | |
| 26314 chr1 manual_curation gene 36194565 36196877 . - . ID=GSCOCG00016076001;Name=Cc01_g19310 | |
| 26315 chr1 manual_curation mRNA 36194565 36196877 . - . ID=GSCOCT00016076001;Parent=GSCOCG00016076001;Name=Cc01_g19310 | |
| 26316 chr1 manual_curation polypeptide 36194843 36196649 . - . ID=GSCOCP00016076001;Dbxref=InterPro:IPR003719,PANTHER:PTHR13774,PFAM:PF02567,PIR:PIRSF016184,SwissProt:Q9CXN7,SwissProt:Q9DCG6,SwissProt:Q9KG32,TAIR:AT1G03210.1,TAIR:AT4G02850.1,TAIR:AT4G02860.1,TIGRFAMs:TIGR00654,TrEMBL:B9S449,TrEMBL:D7TPD8,TrEMBL:F6HQ72;Derives_from=GSCOCT00016076001;Name=Cc01_g19310;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0009058,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized isomerase BH0283,CC_functional_completeness:complete,CC_gene:BH0283,CC_gene:Pbld1,CC_gene:Pbld2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016076001~ Putative Uncharacterized isomerase BH0283~ BH0283~ complete;original_location=join(1054542..1054571%2C1054670..1054873%2C1055163..1055474%2C1055703..1055864%2C1056015..1056098%2C1056241..1056348);owner=coffea | |
| 26317 chr1 manual_curation exon 36196620 36196877 . - . Parent=GSCOCT00016076001 | |
| 26318 chr1 manual_curation exon 36196318 36196521 . - . Parent=GSCOCT00016076001 | |
| 26319 chr1 manual_curation exon 36195717 36196028 . - . Parent=GSCOCT00016076001 | |
| 26320 chr1 manual_curation exon 36195327 36195488 . - . Parent=GSCOCT00016076001 | |
| 26321 chr1 manual_curation exon 36195093 36195176 . - . Parent=GSCOCT00016076001 | |
| 26322 chr1 manual_curation exon 36194565 36194950 . - . Parent=GSCOCT00016076001 | |
| 26323 chr1 manual_curation CDS 36196620 36196649 . - 0 Parent=GSCOCT00016076001 | |
| 26324 chr1 manual_curation CDS 36196318 36196521 . - 0 Parent=GSCOCT00016076001 | |
| 26325 chr1 manual_curation CDS 36195717 36196028 . - 0 Parent=GSCOCT00016076001 | |
| 26326 chr1 manual_curation CDS 36195327 36195488 . - 0 Parent=GSCOCT00016076001 | |
| 26327 chr1 manual_curation CDS 36195093 36195176 . - 0 Parent=GSCOCT00016076001 | |
| 26328 chr1 manual_curation CDS 36194843 36194950 . - 0 Parent=GSCOCT00016076001 | |
| 26329 chr1 manual_curation gene 36196956 36201116 . - . ID=GSCOCG00016075001;Name=Cc01_g19320 | |
| 26330 chr1 manual_curation mRNA 36196956 36201116 . - . ID=GSCOCT00016075001;Parent=GSCOCG00016075001;Name=Cc01_g19320 | |
| 26331 chr1 manual_curation polypeptide 36196956 36201116 . - . ID=GSCOCP00016075001;Dbxref=TAIR:AT1G03250.2,TrEMBL:A5BM09,TrEMBL:D7KCD0,TrEMBL:D7TPD6;Derives_from=GSCOCT00016075001;Name=Cc01_g19320;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B FUNCTIONS IN,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016075001~ Putative unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages.~ unknown_gene~ fragment;original_location=join(1050075..1050219%2C1050684..1050876%2C1052189..1052213%2C1054197..1054235);owner=coffea | |
| 26332 chr1 manual_curation exon 36200972 36201116 . - . Parent=GSCOCT00016075001 | |
| 26333 chr1 manual_curation exon 36200315 36200507 . - . Parent=GSCOCT00016075001 | |
| 26334 chr1 manual_curation exon 36198978 36199002 . - . Parent=GSCOCT00016075001 | |
| 26335 chr1 manual_curation exon 36196956 36196994 . - . Parent=GSCOCT00016075001 | |
| 26336 chr1 manual_curation CDS 36200972 36201116 . - 0 Parent=GSCOCT00016075001 | |
| 26337 chr1 manual_curation CDS 36200315 36200507 . - 1 Parent=GSCOCT00016075001 | |
| 26338 chr1 manual_curation CDS 36198978 36199002 . - 2 Parent=GSCOCT00016075001 | |
| 26339 chr1 manual_curation CDS 36196956 36196994 . - 0 Parent=GSCOCT00016075001 | |
| 26340 chr1 manual_curation gene 36202687 36203028 . + . ID=GSCOCG00016072001;Name=Cc01_g19330 | |
| 26341 chr1 manual_curation mRNA 36202687 36203028 . + . ID=GSCOCT00016072001;Parent=GSCOCG00016072001;Name=Cc01_g19330 | |
| 26342 chr1 manual_curation polypeptide 36202687 36203028 . + . ID=GSCOCP00016072001;Dbxref=InterPro:IPR007011,PFAM:PF04927,TAIR:AT3G22490.1,TAIR:AT3G22500.1,TrEMBL:A5BCU4,TrEMBL:D7L1Q6,TrEMBL:Q5KTS8;Derives_from=GSCOCT00016072001;Name=Cc01_g19330;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016072001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1048430..1048504%2C1048163..1048321));owner=coffea | |
| 26343 chr1 manual_curation exon 36202870 36203028 . + . Parent=GSCOCT00016072001 | |
| 26344 chr1 manual_curation exon 36202687 36202761 . + . Parent=GSCOCT00016072001 | |
| 26345 chr1 manual_curation CDS 36202870 36203028 . + 0 Parent=GSCOCT00016072001 | |
| 26346 chr1 manual_curation CDS 36202687 36202761 . + 0 Parent=GSCOCT00016072001 | |
| 26347 chr1 manual_curation gene 36207066 36207809 . + . ID=GSCOCG00016071001;Name=Cc01_g19340 | |
| 26348 chr1 manual_curation mRNA 36207066 36207809 . + . ID=GSCOCT00016071001;Parent=GSCOCG00016071001;Name=Cc01_g19340 | |
| 26349 chr1 manual_curation polypeptide 36207066 36207809 . + . ID=GSCOCP00016071001;Dbxref=InterPro:IPR006458,PFAM:PF04844,TAIR:AT1G05420.1,TAIR:AT2G32100.1,TAIR:AT4G14860.1,TIGRFAMs:TIGR01568,TrEMBL:A5AV44,TrEMBL:B9H8A1,TrEMBL:F6HDQ8;Derives_from=GSCOCT00016071001;Name=Cc01_g19340;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative ovate family protein 16,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016071001~ Putative ovate family protein 16~ unknown_gene~ complete;original_location=complement(1043382..1044125);owner=coffea | |
| 26350 chr1 manual_curation exon 36207066 36207809 . + . Parent=GSCOCT00016071001 | |
| 26351 chr1 manual_curation CDS 36207066 36207809 . + 0 Parent=GSCOCT00016071001 | |
| 26352 chr1 manual_curation gene 36216489 36217391 . + . ID=GSCOCG00016069001;Name=Cc01_g19350 | |
| 26353 chr1 manual_curation mRNA 36216489 36217391 . + . ID=GSCOCT00016069001;Parent=GSCOCG00016069001;Name=Cc01_g19350 | |
| 26354 chr1 manual_curation polypeptide 36216489 36217391 . + . ID=GSCOCP00016069001;Dbxref=InterPro:IPR008586,PFAM:PF05910,TAIR:AT3G04860.1,TAIR:AT4G12690.1,TAIR:AT5G28150.1,TrEMBL:B9H896,TrEMBL:B9S404,TrEMBL:F6HI45;Derives_from=GSCOCT00016069001;Name=Cc01_g19350;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Plant protein of unknown function (DUF868),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016069001~ Plant protein of unknown function (DUF868)~ unknown_gene~ complete;original_location=complement(join(1034607..1034702%2C1033800..1034540));owner=coffea | |
| 26355 chr1 manual_curation exon 36216651 36217391 . + . Parent=GSCOCT00016069001 | |
| 26356 chr1 manual_curation exon 36216489 36216584 . + . Parent=GSCOCT00016069001 | |
| 26357 chr1 manual_curation CDS 36216651 36217391 . + 0 Parent=GSCOCT00016069001 | |
| 26358 chr1 manual_curation CDS 36216489 36216584 . + 0 Parent=GSCOCT00016069001 | |
| 26359 chr1 manual_curation gene 36218154 36219263 . + . ID=GSCOCG00016067001;Name=Cc01_g19360 | |
| 26360 chr1 manual_curation mRNA 36218154 36219263 . + . ID=GSCOCT00016067001;Parent=GSCOCG00016067001;Name=Cc01_g19360 | |
| 26361 chr1 manual_curation polypeptide 36218154 36219263 . + . ID=GSCOCP00016067001;Dbxref=InterPro:IPR000782,SMART:SM00554,TrEMBL:A5B1E4,TrEMBL:D7T8D0,TrEMBL:D7T8D8;Derives_from=GSCOCT00016067001;Name=Cc01_g19360;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016067001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=complement(1031928..1033037);owner=coffea | |
| 26362 chr1 manual_curation exon 36218154 36219263 . + . Parent=GSCOCT00016067001 | |
| 26363 chr1 manual_curation CDS 36218154 36219263 . + 0 Parent=GSCOCT00016067001 | |
| 26364 chr1 manual_curation gene 36219526 36220229 . - . ID=GSCOCG00016066001;Name=Cc01_g19370 | |
| 26365 chr1 manual_curation mRNA 36219526 36220229 . - . ID=GSCOCT00016066001;Parent=GSCOCG00016066001;Name=Cc01_g19370 | |
| 26366 chr1 manual_curation polypeptide 36219757 36220137 . - . ID=GSCOCP00016066001;Dbxref=InterPro:IPR003441,PFAM:PF02365,PROFILE:PS51005,SUPERFAMILY:SSF101941;Derives_from=GSCOCT00016066001;Name=Cc01_g19370;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016066001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(1031054..1031260%2C1031381..1031434);owner=coffea | |
| 26367 chr1 manual_curation exon 36219931 36220229 . - . Parent=GSCOCT00016066001 | |
| 26368 chr1 manual_curation exon 36219526 36219810 . - . Parent=GSCOCT00016066001 | |
| 26369 chr1 manual_curation CDS 36219931 36220137 . - 0 Parent=GSCOCT00016066001 | |
| 26370 chr1 manual_curation CDS 36219757 36219810 . - 0 Parent=GSCOCT00016066001 | |
| 26371 chr1 manual_curation gene 36222240 36223319 . + . ID=GSCOCG00016065001;Name=Cc01_g19380 | |
| 26372 chr1 manual_curation mRNA 36222240 36223319 . + . ID=GSCOCT00016065001;Parent=GSCOCG00016065001;Name=Cc01_g19380 | |
| 26373 chr1 manual_curation polypeptide 36222240 36223319 . + . ID=GSCOCP00016065001;Dbxref=TAIR:AT4G02725.1,TrEMBL:B9H895,TrEMBL:B9S406,TrEMBL:D7TDX9;Derives_from=GSCOCT00016065001;Name=Cc01_g19380;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016065001~ Putative uncharacterized protein~ unknown_gene~ modules;original_location=complement(join(1028596..1028951%2C1028143..1028284%2C1027872..1027994));owner=coffea | |
| 26374 chr1 manual_curation exon 36223197 36223319 . + . Parent=GSCOCT00016065001 | |
| 26375 chr1 manual_curation exon 36222907 36223048 . + . Parent=GSCOCT00016065001 | |
| 26376 chr1 manual_curation exon 36222240 36222595 . + . Parent=GSCOCT00016065001 | |
| 26377 chr1 manual_curation CDS 36223197 36223319 . + 0 Parent=GSCOCT00016065001 | |
| 26378 chr1 manual_curation CDS 36222907 36223048 . + 2 Parent=GSCOCT00016065001 | |
| 26379 chr1 manual_curation CDS 36222240 36222595 . + 0 Parent=GSCOCT00016065001 | |
| 26380 chr1 manual_curation gene 36226546 36229470 . + . ID=GSCOCG00016063001;Name=Cc01_g19390 | |
| 26381 chr1 manual_curation mRNA 36226546 36229470 . + . ID=GSCOCT00016063001;Parent=GSCOCG00016063001;Name=Cc01_g19390 | |
| 26382 chr1 manual_curation polypeptide 36226694 36229134 . + . ID=GSCOCP00016063001;Dbxref=GENE3D:G3DSA:3.40.630.30,InterPro:IPR000182,InterPro:IPR016181,InterPro:IPR022610,PFAM:PF00583,PROFILE:PS51186,SUPERFAMILY:SSF55729,SwissProt:P61600,SwissProt:Q2PFM2,SwissProt:Q8SSN5,TAIR:AT1G03150.1,TAIR:AT5G13780.1,TrEMBL:D7KCB9,TrEMBL:D7TDX3,TrEMBL:Q8LGI8;Derives_from=GSCOCT00016063001;Name=Cc01_g19390;Ontology_term=CC_evidence_code:ISS,GO:0008080,GO:0008152,CC_EC_number:2.3.1.88,PRODUCT:N-alpha-acetyltransferase 20,CC_functional_completeness:complete,CC_gene:nat5,CC_gene:Naa20,CC_gene:NAA20;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016063001~ N-alpha-acetyltransferase 20~ nat5~ complete;original_location=complement(join(1024420..1024497%2C1024202..1024292%2C1023347..1023479%2C1022402..1022471%2C1022237..1022297%2C1022057..1022148));owner=coffea | |
| 26383 chr1 manual_curation exon 36229043 36229470 . + . Parent=GSCOCT00016063001 | |
| 26384 chr1 manual_curation exon 36228894 36228954 . + . Parent=GSCOCT00016063001 | |
| 26385 chr1 manual_curation exon 36228720 36228789 . + . Parent=GSCOCT00016063001 | |
| 26386 chr1 manual_curation exon 36227712 36227844 . + . Parent=GSCOCT00016063001 | |
| 26387 chr1 manual_curation exon 36226899 36226989 . + . Parent=GSCOCT00016063001 | |
| 26388 chr1 manual_curation exon 36226546 36226771 . + . Parent=GSCOCT00016063001 | |
| 26389 chr1 manual_curation CDS 36229043 36229134 . + 1 Parent=GSCOCT00016063001 | |
| 26390 chr1 manual_curation CDS 36228894 36228954 . + 0 Parent=GSCOCT00016063001 | |
| 26391 chr1 manual_curation CDS 36228720 36228789 . + 2 Parent=GSCOCT00016063001 | |
| 26392 chr1 manual_curation CDS 36227712 36227844 . + 1 Parent=GSCOCT00016063001 | |
| 26393 chr1 manual_curation CDS 36226899 36226989 . + 0 Parent=GSCOCT00016063001 | |
| 26394 chr1 manual_curation CDS 36226694 36226771 . + 0 Parent=GSCOCT00016063001 | |
| 26395 chr1 manual_curation gene 36232113 36239469 . - . ID=GSCOCG00016062001;Name=Cc01_g19400 | |
| 26396 chr1 manual_curation mRNA 36232113 36239469 . - . ID=GSCOCT00016062001;Parent=GSCOCG00016062001;Name=Cc01_g19400 | |
| 26397 chr1 manual_curation polypeptide 36233600 36239251 . - . ID=GSCOCP00016062001;Dbxref=GENE3D:G3DSA:1.10.600.10,InterPro:IPR001906,InterPro:IPR005630,InterPro:IPR008930,InterPro:IPR008949,PFAM:PF01397,PFAM:PF03936,SUPERFAMILY:SSF48239,SUPERFAMILY:SSF48576,SwissProt:O04408,SwissProt:Q38802,SwissProt:Q6ET36,TAIR:AT1G61120.1,TAIR:AT1G79460.1,TAIR:AT4G02780.1,TrEMBL:B9S414,TrEMBL:D0Q1D2,TrEMBL:Q59JI6;Derives_from=GSCOCT00016062001;Name=Cc01_g19400;Ontology_term=CC_evidence_code:ISS,GO:0000287,GO:0008152,GO:0016829,CC_EC_number:5.5.1.13,PRODUCT:Ent-copalyl diphosphate synthase%2C chloroplastic,CC_functional_completeness:complete,CC_gene:GA1,CC_gene:CPS1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016062001~ Ent-copalyl diphosphate synthase%2C chloroplastic~ GA1~ complete;original_location=join(1011940..1012051%2C1012559..1012639%2C1012742..1012830%2C1012971..1013274%2C1013450..1013633%2C1014191..1014405%2C1014526..1014646%2C1014768..1014880%2C1014969..1015195%2C1015287..1015402%2C1015867..1015965%2C1016137..1016391%2C1016696..1016807%2C1016927..1017124%2C1017349..1017591);owner=coffea | |
| 26398 chr1 manual_curation exon 36239140 36239469 . - . Parent=GSCOCT00016062001 | |
| 26399 chr1 manual_curation exon 36238552 36238632 . - . Parent=GSCOCT00016062001 | |
| 26400 chr1 manual_curation exon 36238361 36238449 . - . Parent=GSCOCT00016062001 | |
| 26401 chr1 manual_curation exon 36237917 36238220 . - . Parent=GSCOCT00016062001 | |
| 26402 chr1 manual_curation exon 36237558 36237741 . - . Parent=GSCOCT00016062001 | |
| 26403 chr1 manual_curation exon 36236786 36237000 . - . Parent=GSCOCT00016062001 | |
| 26404 chr1 manual_curation exon 36236545 36236665 . - . Parent=GSCOCT00016062001 | |
| 26405 chr1 manual_curation exon 36236311 36236423 . - . Parent=GSCOCT00016062001 | |
| 26406 chr1 manual_curation exon 36235996 36236222 . - . Parent=GSCOCT00016062001 | |
| 26407 chr1 manual_curation exon 36235789 36235904 . - . Parent=GSCOCT00016062001 | |
| 26408 chr1 manual_curation exon 36235226 36235324 . - . Parent=GSCOCT00016062001 | |
| 26409 chr1 manual_curation exon 36234800 36235054 . - . Parent=GSCOCT00016062001 | |
| 26410 chr1 manual_curation exon 36234384 36234495 . - . Parent=GSCOCT00016062001 | |
| 26411 chr1 manual_curation exon 36234067 36234264 . - . Parent=GSCOCT00016062001 | |
| 26412 chr1 manual_curation exon 36232113 36233842 . - . Parent=GSCOCT00016062001 | |
| 26413 chr1 manual_curation CDS 36239140 36239251 . - 0 Parent=GSCOCT00016062001 | |
| 26414 chr1 manual_curation CDS 36238552 36238632 . - 1 Parent=GSCOCT00016062001 | |
| 26415 chr1 manual_curation CDS 36238361 36238449 . - 1 Parent=GSCOCT00016062001 | |
| 26416 chr1 manual_curation CDS 36237917 36238220 . - 0 Parent=GSCOCT00016062001 | |
| 26417 chr1 manual_curation CDS 36237558 36237741 . - 1 Parent=GSCOCT00016062001 | |
| 26418 chr1 manual_curation CDS 36236786 36237000 . - 2 Parent=GSCOCT00016062001 | |
| 26419 chr1 manual_curation CDS 36236545 36236665 . - 1 Parent=GSCOCT00016062001 | |
| 26420 chr1 manual_curation CDS 36236311 36236423 . - 2 Parent=GSCOCT00016062001 | |
| 26421 chr1 manual_curation CDS 36235996 36236222 . - 1 Parent=GSCOCT00016062001 | |
| 26422 chr1 manual_curation CDS 36235789 36235904 . - 0 Parent=GSCOCT00016062001 | |
| 26423 chr1 manual_curation CDS 36235226 36235324 . - 2 Parent=GSCOCT00016062001 | |
| 26424 chr1 manual_curation CDS 36234800 36235054 . - 2 Parent=GSCOCT00016062001 | |
| 26425 chr1 manual_curation CDS 36234384 36234495 . - 2 Parent=GSCOCT00016062001 | |
| 26426 chr1 manual_curation CDS 36234067 36234264 . - 0 Parent=GSCOCT00016062001 | |
| 26427 chr1 manual_curation CDS 36233600 36233842 . - 0 Parent=GSCOCT00016062001 | |
| 26428 chr1 manual_curation gene 36251445 36253935 . + . ID=GSCOCG00016061001;Name=Cc01_g19410 | |
| 26429 chr1 manual_curation mRNA 36251445 36253935 . + . ID=GSCOCT00016061001;Parent=GSCOCG00016061001;Name=Cc01_g19410 | |
| 26430 chr1 manual_curation polypeptide 36251508 36253883 . + . ID=GSCOCP00016061001;Dbxref=InterPro:IPR003466,InterPro:IPR016087,PFAM:PF02431,SUPERFAMILY:SSF54626,TAIR:AT2G26310.1,TAIR:AT3G63170.1,TrEMBL:A5AE11,TrEMBL:B9GSN0,TrEMBL:F6HI42;Derives_from=GSCOCT00016061001;Name=Cc01_g19410;Ontology_term=CC_evidence_code:ISS,GO:0016872,GO:0042398,CC_EC_number:missing_EC_number,PRODUCT:Chalcone-flavanone isomerase family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016061001~ Chalcone-flavanone isomerase family protein~ unknown_gene~ complete;original_location=complement(join(999281..999683%2C998459..998708%2C997808..997899%2C997308..997447));owner=coffea | |
| 26431 chr1 manual_curation exon 36253744 36253935 . + . Parent=GSCOCT00016061001 | |
| 26432 chr1 manual_curation exon 36253292 36253383 . + . Parent=GSCOCT00016061001 | |
| 26433 chr1 manual_curation exon 36252483 36252732 . + . Parent=GSCOCT00016061001 | |
| 26434 chr1 manual_curation exon 36251445 36251910 . + . Parent=GSCOCT00016061001 | |
| 26435 chr1 manual_curation CDS 36253744 36253883 . + 1 Parent=GSCOCT00016061001 | |
| 26436 chr1 manual_curation CDS 36253292 36253383 . + 2 Parent=GSCOCT00016061001 | |
| 26437 chr1 manual_curation CDS 36252483 36252732 . + 1 Parent=GSCOCT00016061001 | |
| 26438 chr1 manual_curation CDS 36251508 36251910 . + 0 Parent=GSCOCT00016061001 | |
| 26439 chr1 manual_curation gene 36253994 36258117 . - . ID=GSCOCG00016060001;Name=Cc01_g19420 | |
| 26440 chr1 manual_curation mRNA 36253994 36258117 . - . ID=GSCOCT00016060001;Parent=GSCOCG00016060001;Name=Cc01_g19420 | |
| 26441 chr1 manual_curation polypeptide 36254451 36258045 . - . ID=GSCOCP00016060001;Dbxref=HAMAP:MF_00040,InterPro:IPR002661,InterPro:IPR015998,PANTHER:PTHR20982,PANTHER:PTHR20982:SF3,PFAM:PF01765,SUPERFAMILY:SSF55194,SwissProt:P37706,SwissProt:P82231,SwissProt:Q9M1X0,TAIR:AT3G01800.1,TAIR:AT3G63190.1,TIGRFAMs:TIGR00496,TrEMBL:A9PJM1,TrEMBL:C6TCH7,TrEMBL:D7TDW8;Derives_from=GSCOCT00016060001;Name=Cc01_g19420;Ontology_term=CC_evidence_code:ISS,GO:0005737,GO:0006412,GO:0006415,CC_EC_number:missing_EC_number,PRODUCT:Ribosome-recycling factor%2C chloroplastic (Fragment),CC_functional_completeness:modules,CC_gene:RRF;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016060001~ Ribosome-recycling factor%2C chloroplastic (Fragment)~ RRF~ modules;original_location=join(993146..993233%2C993341..993590%2C993706..993772%2C993958..994053%2C994925..995022%2C995154..995265%2C995439..995480%2C995957..996013%2C996086..996136%2C996398..996454%2C996723..996740);owner=coffea | |
| 26442 chr1 manual_curation exon 36257958 36258117 . - . Parent=GSCOCT00016060001 | |
| 26443 chr1 manual_curation exon 36257601 36257850 . - . Parent=GSCOCT00016060001 | |
| 26444 chr1 manual_curation exon 36257419 36257485 . - . Parent=GSCOCT00016060001 | |
| 26445 chr1 manual_curation exon 36257138 36257233 . - . Parent=GSCOCT00016060001 | |
| 26446 chr1 manual_curation exon 36256169 36256266 . - . Parent=GSCOCT00016060001 | |
| 26447 chr1 manual_curation exon 36255926 36256037 . - . Parent=GSCOCT00016060001 | |
| 26448 chr1 manual_curation exon 36255711 36255752 . - . Parent=GSCOCT00016060001 | |
| 26449 chr1 manual_curation exon 36255178 36255234 . - . Parent=GSCOCT00016060001 | |
| 26450 chr1 manual_curation exon 36255055 36255105 . - . Parent=GSCOCT00016060001 | |
| 26451 chr1 manual_curation exon 36254737 36254793 . - . Parent=GSCOCT00016060001 | |
| 26452 chr1 manual_curation exon 36253994 36254468 . - . Parent=GSCOCT00016060001 | |
| 26453 chr1 manual_curation CDS 36257958 36258045 . - 0 Parent=GSCOCT00016060001 | |
| 26454 chr1 manual_curation CDS 36257601 36257850 . - 1 Parent=GSCOCT00016060001 | |
| 26455 chr1 manual_curation CDS 36257419 36257485 . - 2 Parent=GSCOCT00016060001 | |
| 26456 chr1 manual_curation CDS 36257138 36257233 . - 0 Parent=GSCOCT00016060001 | |
| 26457 chr1 manual_curation CDS 36256169 36256266 . - 0 Parent=GSCOCT00016060001 | |
| 26458 chr1 manual_curation CDS 36255926 36256037 . - 2 Parent=GSCOCT00016060001 | |
| 26459 chr1 manual_curation CDS 36255711 36255752 . - 0 Parent=GSCOCT00016060001 | |
| 26460 chr1 manual_curation CDS 36255178 36255234 . - 0 Parent=GSCOCT00016060001 | |
| 26461 chr1 manual_curation CDS 36255055 36255105 . - 0 Parent=GSCOCT00016060001 | |
| 26462 chr1 manual_curation CDS 36254737 36254793 . - 0 Parent=GSCOCT00016060001 | |
| 26463 chr1 manual_curation CDS 36254451 36254468 . - 0 Parent=GSCOCT00016060001 | |
| 26464 chr1 manual_curation gene 36265776 36267813 . + . ID=GSCOCG00016058001;Name=Cc01_g19430 | |
| 26465 chr1 manual_curation mRNA 36265776 36267813 . + . ID=GSCOCT00016058001;Parent=GSCOCG00016058001;Name=Cc01_g19430 | |
| 26466 chr1 manual_curation polypeptide 36266269 36267636 . + . ID=GSCOCP00016058001;Dbxref=InterPro:IPR002641,InterPro:IPR016035,PFAM:PF01734,SUPERFAMILY:SSF52151,SwissProt:Q2MY40,SwissProt:Q2MY58,SwissProt:Q41487,TAIR:AT2G39220.1,TAIR:AT3G54950.1,TAIR:AT3G63200.1,TrEMBL:B9H888,TrEMBL:F6HI39,TrEMBL:Q93ZQ3;Derives_from=GSCOCT00016058001;Name=Cc01_g19430;Ontology_term=CC_evidence_code:ISS,GO:0006629,GO:0008152,CC_EC_number:missing_EC_number,PRODUCT:Putative Patatin group A-3,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016058001~ Putative Patatin group A-3~ unknown_gene~ modules;original_location=complement(join(984576..984922%2C983978..984506%2C983555..983818));owner=coffea | |
| 26467 chr1 manual_curation exon 36267373 36267813 . + . Parent=GSCOCT00016058001 | |
| 26468 chr1 manual_curation exon 36266685 36267213 . + . Parent=GSCOCT00016058001 | |
| 26469 chr1 manual_curation exon 36265776 36266615 . + . Parent=GSCOCT00016058001 | |
| 26470 chr1 manual_curation CDS 36267373 36267636 . + 0 Parent=GSCOCT00016058001 | |
| 26471 chr1 manual_curation CDS 36266685 36267213 . + 2 Parent=GSCOCT00016058001 | |
| 26472 chr1 manual_curation CDS 36266269 36266615 . + 0 Parent=GSCOCT00016058001 | |
| 26473 chr1 manual_curation gene 36280011 36286788 . + . ID=GSCOCG00016057001;Name=Cc01_g19440 | |
| 26474 chr1 manual_curation mRNA 36280011 36286788 . + . ID=GSCOCT00016057001;Parent=GSCOCG00016057001;Name=Cc01_g19440 | |
| 26475 chr1 manual_curation polypeptide 36280197 36286231 . + . ID=GSCOCP00016057001;Dbxref=GENE3D:G3DSA:1.25.10.10,GENE3D:G3DSA:3.30.710.10,InterPro:IPR000210,InterPro:IPR000225,InterPro:IPR011333,InterPro:IPR011989,InterPro:IPR013069,InterPro:IPR016024,PFAM:PF00514,PFAM:PF00651,PROFILE:PS50097,PROFILE:PS50176,SMART:SM00185,SMART:SM00225,SUPERFAMILY:SSF48371,SUPERFAMILY:SSF54695,SwissProt:B7U179,SwissProt:B9DHT4,SwissProt:P0CM60,TAIR:AT3G06190.1,TAIR:AT5G13060.1,TAIR:AT5G19330.1,TrEMBL:B9RTY8,TrEMBL:F6HQ83,TrEMBL:I1LFS7;Derives_from=GSCOCT00016057001;Name=Cc01_g19440;Ontology_term=CC_evidence_code:ISS,GO:0005488,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:ARM REPEAT PROTEIN INTERACTING WITH ABF2,CC_functional_completeness:complete,CC_gene:ARIA,CC_gene:ABAP1,CC_gene:VAC8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016057001~ ARM REPEAT PROTEIN INTERACTING WITH ABF2~ ARIA~ complete;original_location=complement(join(970736..970994%2C970425..970588%2C969479..969651%2C969279..969399%2C969122..969196%2C968909..969003%2C968663..968738%2C968448..968555%2C967964..968092%2C967793..967861%2C967591..967650%2C967086..967209%2C966868..967007%2C966325..966388%2C966159..966238%2C965835..965899%2C965620..965737%2C965415..965539%2C964960..965053));owner=coffea | |
| 26476 chr1 manual_curation exon 36286138 36286788 . + . Parent=GSCOCT00016057001 | |
| 26477 chr1 manual_curation exon 36285652 36285776 . + . Parent=GSCOCT00016057001 | |
| 26478 chr1 manual_curation exon 36285454 36285571 . + . Parent=GSCOCT00016057001 | |
| 26479 chr1 manual_curation exon 36285292 36285356 . + . Parent=GSCOCT00016057001 | |
| 26480 chr1 manual_curation exon 36284953 36285032 . + . Parent=GSCOCT00016057001 | |
| 26481 chr1 manual_curation exon 36284803 36284866 . + . Parent=GSCOCT00016057001 | |
| 26482 chr1 manual_curation exon 36284184 36284323 . + . Parent=GSCOCT00016057001 | |
| 26483 chr1 manual_curation exon 36283982 36284105 . + . Parent=GSCOCT00016057001 | |
| 26484 chr1 manual_curation exon 36283541 36283600 . + . Parent=GSCOCT00016057001 | |
| 26485 chr1 manual_curation exon 36283330 36283398 . + . Parent=GSCOCT00016057001 | |
| 26486 chr1 manual_curation exon 36283099 36283227 . + . Parent=GSCOCT00016057001 | |
| 26487 chr1 manual_curation exon 36282636 36282743 . + . Parent=GSCOCT00016057001 | |
| 26488 chr1 manual_curation exon 36282453 36282528 . + . Parent=GSCOCT00016057001 | |
| 26489 chr1 manual_curation exon 36282188 36282282 . + . Parent=GSCOCT00016057001 | |
| 26490 chr1 manual_curation exon 36281995 36282069 . + . Parent=GSCOCT00016057001 | |
| 26491 chr1 manual_curation exon 36281792 36281912 . + . Parent=GSCOCT00016057001 | |
| 26492 chr1 manual_curation exon 36281540 36281712 . + . Parent=GSCOCT00016057001 | |
| 26493 chr1 manual_curation exon 36280603 36280766 . + . Parent=GSCOCT00016057001 | |
| 26494 chr1 manual_curation exon 36280011 36280455 . + . Parent=GSCOCT00016057001 | |
| 26495 chr1 manual_curation CDS 36286138 36286231 . + 2 Parent=GSCOCT00016057001 | |
| 26496 chr1 manual_curation CDS 36285652 36285776 . + 0 Parent=GSCOCT00016057001 | |
| 26497 chr1 manual_curation CDS 36285454 36285571 . + 2 Parent=GSCOCT00016057001 | |
| 26498 chr1 manual_curation CDS 36285292 36285356 . + 0 Parent=GSCOCT00016057001 | |
| 26499 chr1 manual_curation CDS 36284953 36285032 . + 1 Parent=GSCOCT00016057001 | |
| 26500 chr1 manual_curation CDS 36284803 36284866 . + 0 Parent=GSCOCT00016057001 | |
| 26501 chr1 manual_curation CDS 36284184 36284323 . + 1 Parent=GSCOCT00016057001 | |
| 26502 chr1 manual_curation CDS 36283982 36284105 . + 0 Parent=GSCOCT00016057001 | |
| 26503 chr1 manual_curation CDS 36283541 36283600 . + 0 Parent=GSCOCT00016057001 | |
| 26504 chr1 manual_curation CDS 36283330 36283398 . + 0 Parent=GSCOCT00016057001 | |
| 26505 chr1 manual_curation CDS 36283099 36283227 . + 0 Parent=GSCOCT00016057001 | |
| 26506 chr1 manual_curation CDS 36282636 36282743 . + 0 Parent=GSCOCT00016057001 | |
| 26507 chr1 manual_curation CDS 36282453 36282528 . + 2 Parent=GSCOCT00016057001 | |
| 26508 chr1 manual_curation CDS 36282188 36282282 . + 0 Parent=GSCOCT00016057001 | |
| 26509 chr1 manual_curation CDS 36281995 36282069 . + 0 Parent=GSCOCT00016057001 | |
| 26510 chr1 manual_curation CDS 36281792 36281912 . + 2 Parent=GSCOCT00016057001 | |
| 26511 chr1 manual_curation CDS 36281540 36281712 . + 0 Parent=GSCOCT00016057001 | |
| 26512 chr1 manual_curation CDS 36280603 36280766 . + 1 Parent=GSCOCT00016057001 | |
| 26513 chr1 manual_curation CDS 36280197 36280455 . + 0 Parent=GSCOCT00016057001 | |
| 26514 chr1 manual_curation gene 36288775 36291316 . - . ID=GSCOCG00016056001;Name=Cc01_g19450 | |
| 26515 chr1 manual_curation mRNA 36288775 36291316 . - . ID=GSCOCT00016056001;Parent=GSCOCG00016056001;Name=Cc01_g19450 | |
| 26516 chr1 manual_curation polypeptide 36289237 36290266 . - . ID=GSCOCP00016056001;Dbxref=InterPro:IPR011028,InterPro:IPR012389,InterPro:IPR013922,PFAM:PF08613,PIR:PIRSF027110,SUPERFAMILY:SSF47954,SwissProt:O80513,SwissProt:Q75HV0,SwissProt:Q8LB60,TAIR:AT2G44740.1,TAIR:AT3G05327.1,TAIR:AT3G63120.1,TrEMBL:B9S423,TrEMBL:F6HQ58,TrEMBL:I1JNU3;Derives_from=GSCOCT00016056001;Name=Cc01_g19450;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Cyclin-P3-1,CC_functional_completeness:complete,CC_gene:CYCP3-1,CC_gene:CYCU3-1,CC_gene:CYCU4-1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016056001~ Cyclin-P3-1~ CYCP3-1~ complete;original_location=join(960925..961325%2C961702..961954);owner=coffea | |
| 26517 chr1 manual_curation exon 36291122 36291316 . - . Parent=GSCOCT00016056001 | |
| 26518 chr1 manual_curation exon 36289866 36290281 . - . Parent=GSCOCT00016056001 | |
| 26519 chr1 manual_curation exon 36288775 36289489 . - . Parent=GSCOCT00016056001 | |
| 26520 chr1 manual_curation CDS 36289866 36290266 . - 0 Parent=GSCOCT00016056001 | |
| 26521 chr1 manual_curation CDS 36289237 36289489 . - 2 Parent=GSCOCT00016056001 | |
| 26522 chr1 manual_curation gene 36293500 36297727 . + . ID=GSCOCG00016054001;Name=Cc01_g19460 | |
| 26523 chr1 manual_curation mRNA 36293500 36297727 . + . ID=GSCOCT00016054001;Parent=GSCOCG00016054001;Name=Cc01_g19460 | |
| 26524 chr1 manual_curation polypeptide 36295830 36297431 . + . ID=GSCOCP00016054001;Dbxref=InterPro:IPR001611,InterPro:IPR003590,PFAM:PF00560,SMART:SM00368,SwissProt:Q5DU56,SwissProt:Q9LE82,SwissProt:Q9M651,TAIR:AT3G06000.1,TAIR:AT3G63130.1,TAIR:AT5G19320.1,TrEMBL:A5JGX7,TrEMBL:A7M8K3,TrEMBL:F6HQ59;Derives_from=GSCOCT00016054001;Name=Cc01_g19460;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:RAN GTPase-activating protein 1,CC_functional_completeness:complete,CC_gene:RANGAP1,CC_gene:RANGAP2,CC_gene:Nlrc3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016054001~ RAN GTPase-activating protein 1~ RANGAP1~ complete;original_location=complement(953760..955361);owner=coffea | |
| 26525 chr1 manual_curation exon 36293500 36294239 . + . Parent=GSCOCT00016054001 | |
| 26526 chr1 manual_curation exon 36295820 36297727 . + . Parent=GSCOCT00016054001 | |
| 26527 chr1 manual_curation CDS 36295830 36297431 . + 0 Parent=GSCOCT00016054001 | |
| 26528 chr1 manual_curation gene 36298756 36301167 . - . ID=GSCOCG00016053001;Name=Cc01_g19470 | |
| 26529 chr1 manual_curation mRNA 36298756 36301167 . - . ID=GSCOCT00016053001;Parent=GSCOCG00016053001;Name=Cc01_g19470 | |
| 26530 chr1 manual_curation polypeptide 36298981 36301137 . - . ID=GSCOCP00016053001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR001509,InterPro:IPR016040,PFAM:PF01370,SwissProt:Q9LYA9,SwissProt:Q9SA52,TAIR:AT1G09340.1,TAIR:AT3G63140.1,TrEMBL:B9GSN8,TrEMBL:B9H883,TrEMBL:Q7X998;Derives_from=GSCOCT00016053001;Name=Cc01_g19470;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,GO:0044237,GO:0050662,CC_EC_number:missing_EC_number,PRODUCT:Chloroplast stem-loop binding protein of 41 kDa a%2C chloroplastic,CC_functional_completeness:complete,CC_gene:CSP41A,CC_gene:CSP41B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016053001~ Chloroplast stem-loop binding protein of 41 kDa a%2C chloroplastic~ CSP41A~ complete;original_location=join(950054..950464%2C950698..950819%2C950927..951029%2C951121..951259%2C951575..951852%2C952028..952210);owner=coffea | |
| 26531 chr1 manual_curation exon 36300727 36301167 . - . Parent=GSCOCT00016053001 | |
| 26532 chr1 manual_curation exon 36300372 36300493 . - . Parent=GSCOCT00016053001 | |
| 26533 chr1 manual_curation exon 36300162 36300264 . - . Parent=GSCOCT00016053001 | |
| 26534 chr1 manual_curation exon 36299932 36300070 . - . Parent=GSCOCT00016053001 | |
| 26535 chr1 manual_curation exon 36299339 36299616 . - . Parent=GSCOCT00016053001 | |
| 26536 chr1 manual_curation exon 36298756 36299163 . - . Parent=GSCOCT00016053001 | |
| 26537 chr1 manual_curation CDS 36300727 36301137 . - 0 Parent=GSCOCT00016053001 | |
| 26538 chr1 manual_curation CDS 36300372 36300493 . - 0 Parent=GSCOCT00016053001 | |
| 26539 chr1 manual_curation CDS 36300162 36300264 . - 2 Parent=GSCOCT00016053001 | |
| 26540 chr1 manual_curation CDS 36299932 36300070 . - 0 Parent=GSCOCT00016053001 | |
| 26541 chr1 manual_curation CDS 36299339 36299616 . - 1 Parent=GSCOCT00016053001 | |
| 26542 chr1 manual_curation CDS 36298981 36299163 . - 0 Parent=GSCOCT00016053001 | |
| 26543 chr1 manual_curation gene 36302415 36304543 . + . ID=GSCOCG00016052001;Name=Cc01_g19480 | |
| 26544 chr1 manual_curation mRNA 36302415 36304543 . + . ID=GSCOCT00016052001;Parent=GSCOCG00016052001;Name=Cc01_g19480 | |
| 26545 chr1 manual_curation polypeptide 36302514 36304456 . + . ID=GSCOCP00016052001;Dbxref=TAIR:AT1G30050.1,TAIR:AT4G02800.1,TAIR:AT5G01970.1,TrEMBL:B9GSN9,TrEMBL:B9S426,TrEMBL:D7TPB2;Derives_from=GSCOCT00016052001;Name=Cc01_g19480;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016052001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 16 plant structures%3B EXPRESSED DURING: 9 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01970.1)%3B Has 3209 Blast hits to 2720 proteins in 308 species: Archae - 13%3B Bacteria - 213%3B Metazoa - 1207%3B Fungi - 247%3B Plants - 183%3B Viruses - 21%3B Other Eukaryotes - 1325 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(948630..948677%2C948363..948515%2C948099..948221%2C947554..947820%2C947261..947425%2C946735..947061));owner=coffea | |
| 26546 chr1 manual_curation exon 36304130 36304543 . + . Parent=GSCOCT00016052001 | |
| 26547 chr1 manual_curation exon 36303766 36303930 . + . Parent=GSCOCT00016052001 | |
| 26548 chr1 manual_curation exon 36303371 36303637 . + . Parent=GSCOCT00016052001 | |
| 26549 chr1 manual_curation exon 36302970 36303092 . + . Parent=GSCOCT00016052001 | |
| 26550 chr1 manual_curation exon 36302676 36302828 . + . Parent=GSCOCT00016052001 | |
| 26551 chr1 manual_curation exon 36302415 36302561 . + . Parent=GSCOCT00016052001 | |
| 26552 chr1 manual_curation CDS 36304130 36304456 . + 0 Parent=GSCOCT00016052001 | |
| 26553 chr1 manual_curation CDS 36303766 36303930 . + 0 Parent=GSCOCT00016052001 | |
| 26554 chr1 manual_curation CDS 36303371 36303637 . + 0 Parent=GSCOCT00016052001 | |
| 26555 chr1 manual_curation CDS 36302970 36303092 . + 0 Parent=GSCOCT00016052001 | |
| 26556 chr1 manual_curation CDS 36302676 36302828 . + 0 Parent=GSCOCT00016052001 | |
| 26557 chr1 manual_curation CDS 36302514 36302561 . + 0 Parent=GSCOCT00016052001 | |
| 26558 chr1 manual_curation gene 36304618 36309143 . - . ID=GSCOCG00016051001;Name=Cc01_g19490 | |
| 26559 chr1 manual_curation mRNA 36304618 36309143 . - . ID=GSCOCT00016051001;Parent=GSCOCG00016051001;Name=Cc01_g19490 | |
| 26560 chr1 manual_curation polypeptide 36304985 36308761 . - . ID=GSCOCP00016051001;Dbxref=TrEMBL:B9S429,TrEMBL:D7TPB3;Derives_from=GSCOCT00016051001;Name=Cc01_g19490;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016051001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(942430..942474%2C944149..944679%2C944796..944885%2C945004..945075%2C945988..946206);owner=coffea | |
| 26561 chr1 manual_curation exon 36308717 36309143 . - . Parent=GSCOCT00016051001 | |
| 26562 chr1 manual_curation exon 36306512 36307042 . - . Parent=GSCOCT00016051001 | |
| 26563 chr1 manual_curation exon 36306306 36306395 . - . Parent=GSCOCT00016051001 | |
| 26564 chr1 manual_curation exon 36306116 36306187 . - . Parent=GSCOCT00016051001 | |
| 26565 chr1 manual_curation exon 36304618 36305203 . - . Parent=GSCOCT00016051001 | |
| 26566 chr1 manual_curation CDS 36308717 36308761 . - 0 Parent=GSCOCT00016051001 | |
| 26567 chr1 manual_curation CDS 36306512 36307042 . - 0 Parent=GSCOCT00016051001 | |
| 26568 chr1 manual_curation CDS 36306306 36306395 . - 0 Parent=GSCOCT00016051001 | |
| 26569 chr1 manual_curation CDS 36306116 36306187 . - 0 Parent=GSCOCT00016051001 | |
| 26570 chr1 manual_curation CDS 36304985 36305203 . - 0 Parent=GSCOCT00016051001 | |
| 26571 chr1 manual_curation gene 36310543 36319929 . + . ID=GSCOCG00016050001;Name=Cc01_g19500 | |
| 26572 chr1 manual_curation mRNA 36310543 36319929 . + . ID=GSCOCT00016050001;Parent=GSCOCG00016050001;Name=Cc01_g19500 | |
| 26573 chr1 manual_curation polypeptide 36310740 36319636 . + . ID=GSCOCP00016050001;Dbxref=InterPro:IPR002917,InterPro:IPR003733,PFAM:PF01926,PFAM:PF02581,SUPERFAMILY:SSF51391,SwissProt:P40983,TAIR:AT1G03160.1,TrEMBL:B9S430,TrEMBL:D7TPB4,TrEMBL:I1JFA7;Derives_from=GSCOCT00016050001;Name=Cc01_g19500;Ontology_term=CC_evidence_code:ISS,GO:0004789,GO:0005525,GO:0005622,GO:0009228,CC_EC_number:missing_EC_number,PRODUCT:FZO-like,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016050001~ FZO-like~ unknown_gene~ complete;original_location=complement(join(939932..940451%2C938917..939473%2C938737..938805%2C936805..937002%2C935890..936021%2C934977..935063%2C934407..934844%2C934120..934287%2C932753..932980%2C932265..932380%2C931555..931837));owner=coffea | |
| 26574 chr1 manual_curation exon 36319354 36319929 . + . Parent=GSCOCT00016050001 | |
| 26575 chr1 manual_curation exon 36318811 36318926 . + . Parent=GSCOCT00016050001 | |
| 26576 chr1 manual_curation exon 36318211 36318438 . + . Parent=GSCOCT00016050001 | |
| 26577 chr1 manual_curation exon 36316904 36317071 . + . Parent=GSCOCT00016050001 | |
| 26578 chr1 manual_curation exon 36316347 36316784 . + . Parent=GSCOCT00016050001 | |
| 26579 chr1 manual_curation exon 36316128 36316214 . + . Parent=GSCOCT00016050001 | |
| 26580 chr1 manual_curation exon 36315170 36315301 . + . Parent=GSCOCT00016050001 | |
| 26581 chr1 manual_curation exon 36314189 36314386 . + . Parent=GSCOCT00016050001 | |
| 26582 chr1 manual_curation exon 36312386 36312454 . + . Parent=GSCOCT00016050001 | |
| 26583 chr1 manual_curation exon 36311718 36312274 . + . Parent=GSCOCT00016050001 | |
| 26584 chr1 manual_curation exon 36310543 36311259 . + . Parent=GSCOCT00016050001 | |
| 26585 chr1 manual_curation CDS 36319354 36319636 . + 2 Parent=GSCOCT00016050001 | |
| 26586 chr1 manual_curation CDS 36318811 36318926 . + 0 Parent=GSCOCT00016050001 | |
| 26587 chr1 manual_curation CDS 36318211 36318438 . + 0 Parent=GSCOCT00016050001 | |
| 26588 chr1 manual_curation CDS 36316904 36317071 . + 0 Parent=GSCOCT00016050001 | |
| 26589 chr1 manual_curation CDS 36316347 36316784 . + 0 Parent=GSCOCT00016050001 | |
| 26590 chr1 manual_curation CDS 36316128 36316214 . + 0 Parent=GSCOCT00016050001 | |
| 26591 chr1 manual_curation CDS 36315170 36315301 . + 0 Parent=GSCOCT00016050001 | |
| 26592 chr1 manual_curation CDS 36314189 36314386 . + 0 Parent=GSCOCT00016050001 | |
| 26593 chr1 manual_curation CDS 36312386 36312454 . + 0 Parent=GSCOCT00016050001 | |
| 26594 chr1 manual_curation CDS 36311718 36312274 . + 1 Parent=GSCOCT00016050001 | |
| 26595 chr1 manual_curation CDS 36310740 36311259 . + 0 Parent=GSCOCT00016050001 | |
| 26596 chr1 manual_curation gene 36322771 36323817 . + . ID=GSCOCG00016049001;Name=Cc01_g19510 | |
| 26597 chr1 manual_curation mRNA 36322771 36323817 . + . ID=GSCOCT00016049001;Parent=GSCOCG00016049001;Name=Cc01_g19510 | |
| 26598 chr1 manual_curation polypeptide 36322771 36323817 . + . ID=GSCOCP00016049001;Dbxref=InterPro:IPR021410,PFAM:PF11250,SwissProt:Q6NMR8,SwissProt:Q8GXU9,SwissProt:Q9SY06,TAIR:AT1G03170.1,TAIR:AT4G02810.1,TAIR:AT5G19260.1,TrEMBL:B9H879,TrEMBL:F6HQ61,TrEMBL:I1N9H2;Derives_from=GSCOCT00016049001;Name=Cc01_g19510;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:FAF3,CC_gene:FAF2,CC_gene:FAF1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016049001~ Putative uncharacterized protein~ FAF3~ complete;original_location=complement(927374..928420);owner=coffea | |
| 26599 chr1 manual_curation exon 36322771 36323817 . + . Parent=GSCOCT00016049001 | |
| 26600 chr1 manual_curation CDS 36322771 36323817 . + 0 Parent=GSCOCT00016049001 | |
| 26601 chr1 manual_curation gene 36342805 36345689 . + . ID=GSCOCG00016047001;Name=Cc01_g19520 | |
| 26602 chr1 manual_curation mRNA 36342805 36345689 . + . ID=GSCOCT00016047001;Parent=GSCOCG00016047001;Name=Cc01_g19520 | |
| 26603 chr1 manual_curation polypeptide 36342963 36344967 . + . ID=GSCOCP00016047001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:O22714,SwissProt:Q8LPS6,SwissProt:Q9SY07,TAIR:AT1G02150.1,TAIR:AT1G60770.1,TAIR:AT4G02820.1,TIGRFAMs:TIGR00756,TrEMBL:A5ALW8,TrEMBL:B9H877,TrEMBL:F6HEI3;Derives_from=GSCOCT00016047001;Name=Cc01_g19520;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At4g02820%2C mitochondrial,CC_functional_completeness:complete,CC_gene:At4g02820,CC_gene:At1g02150,CC_gene:At1g60770;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016047001~ Pentatricopeptide repeat-containing protein At4g02820%2C mitochondrial~ At4g02820~ complete;original_location=complement(join(907938..908228%2C906224..907480));owner=coffea | |
| 26604 chr1 manual_curation exon 36343711 36345689 . + . Parent=GSCOCT00016047001 | |
| 26605 chr1 manual_curation exon 36342805 36343253 . + . Parent=GSCOCT00016047001 | |
| 26606 chr1 manual_curation CDS 36343711 36344967 . + 0 Parent=GSCOCT00016047001 | |
| 26607 chr1 manual_curation CDS 36342963 36343253 . + 0 Parent=GSCOCT00016047001 | |
| 26608 chr1 manual_curation gene 36347968 36348810 . + . ID=GSCOCG00016046001;Name=Cc01_g19530 | |
| 26609 chr1 manual_curation mRNA 36347968 36348810 . + . ID=GSCOCT00016046001;Parent=GSCOCG00016046001;Name=Cc01_g19530 | |
| 26610 chr1 manual_curation polypeptide 36348028 36348715 . + . ID=GSCOCP00016046001;Derives_from=GSCOCT00016046001;Name=Cc01_g19530;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016046001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(903020..903163%2C902801..902893%2C902476..902637));owner=coffea | |
| 26611 chr1 manual_curation exon 36348554 36348810 . + . Parent=GSCOCT00016046001 | |
| 26612 chr1 manual_curation exon 36348298 36348390 . + . Parent=GSCOCT00016046001 | |
| 26613 chr1 manual_curation exon 36347968 36348171 . + . Parent=GSCOCT00016046001 | |
| 26614 chr1 manual_curation CDS 36348554 36348715 . + 0 Parent=GSCOCT00016046001 | |
| 26615 chr1 manual_curation CDS 36348298 36348390 . + 0 Parent=GSCOCT00016046001 | |
| 26616 chr1 manual_curation CDS 36348028 36348171 . + 0 Parent=GSCOCT00016046001 | |
| 26617 chr1 manual_curation gene 36350407 36358977 . + . ID=GSCOCG00016045001;Name=Cc01_g19540 | |
| 26618 chr1 manual_curation mRNA 36350407 36358977 . + . ID=GSCOCT00016045001;Parent=GSCOCG00016045001;Name=Cc01_g19540 | |
| 26619 chr1 manual_curation polypeptide 36351185 36358030 . + . ID=GSCOCP00016045001;Dbxref=InterPro:IPR002208,PANTHER:PTHR10906,PFAM:PF00344,PRINTS:PR00303,SUPERFAMILY:SSF103491,SwissProt:F4IQV7,SwissProt:P0A4H0,SwissProt:P0A4H1,TAIR:AT2G18710.1,TAIR:AT2G31530.1,TrEMBL:A5C2B5,TrEMBL:D7TPF0,TrEMBL:I1JNT8;Derives_from=GSCOCT00016045001;Name=Cc01_g19540;Ontology_term=CC_evidence_code:ISS,GO:0015031,GO:0015450,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Preprotein translocase subunit SCY2%2C chloroplastic,CC_functional_completeness:complete,CC_gene:SCY2,CC_gene:secY;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016045001~ Preprotein translocase subunit SCY2%2C chloroplastic~ SCY2~ complete;original_location=complement(join(899514..900006%2C898661..898749%2C898026..898105%2C897814..897903%2C897496..897587%2C897162..897245%2C896270..896411%2C895831..895947%2C895284..895413%2C894661..894784%2C894427..894533%2C893161..893250));owner=coffea | |
| 26620 chr1 manual_curation exon 36357941 36358977 . + . Parent=GSCOCT00016045001 | |
| 26621 chr1 manual_curation exon 36356658 36356764 . + . Parent=GSCOCT00016045001 | |
| 26622 chr1 manual_curation exon 36356407 36356530 . + . Parent=GSCOCT00016045001 | |
| 26623 chr1 manual_curation exon 36355778 36355907 . + . Parent=GSCOCT00016045001 | |
| 26624 chr1 manual_curation exon 36355244 36355360 . + . Parent=GSCOCT00016045001 | |
| 26625 chr1 manual_curation exon 36354780 36354921 . + . Parent=GSCOCT00016045001 | |
| 26626 chr1 manual_curation exon 36353946 36354029 . + . Parent=GSCOCT00016045001 | |
| 26627 chr1 manual_curation exon 36353604 36353695 . + . Parent=GSCOCT00016045001 | |
| 26628 chr1 manual_curation exon 36353288 36353377 . + . Parent=GSCOCT00016045001 | |
| 26629 chr1 manual_curation exon 36353086 36353165 . + . Parent=GSCOCT00016045001 | |
| 26630 chr1 manual_curation exon 36352442 36352530 . + . Parent=GSCOCT00016045001 | |
| 26631 chr1 manual_curation exon 36350407 36351677 . + . Parent=GSCOCT00016045001 | |
| 26632 chr1 manual_curation CDS 36357941 36358030 . + 0 Parent=GSCOCT00016045001 | |
| 26633 chr1 manual_curation CDS 36356658 36356764 . + 1 Parent=GSCOCT00016045001 | |
| 26634 chr1 manual_curation CDS 36356407 36356530 . + 0 Parent=GSCOCT00016045001 | |
| 26635 chr1 manual_curation CDS 36355778 36355907 . + 2 Parent=GSCOCT00016045001 | |
| 26636 chr1 manual_curation CDS 36355244 36355360 . + 2 Parent=GSCOCT00016045001 | |
| 26637 chr1 manual_curation CDS 36354780 36354921 . + 1 Parent=GSCOCT00016045001 | |
| 26638 chr1 manual_curation CDS 36353946 36354029 . + 1 Parent=GSCOCT00016045001 | |
| 26639 chr1 manual_curation CDS 36353604 36353695 . + 2 Parent=GSCOCT00016045001 | |
| 26640 chr1 manual_curation CDS 36353288 36353377 . + 2 Parent=GSCOCT00016045001 | |
| 26641 chr1 manual_curation CDS 36353086 36353165 . + 0 Parent=GSCOCT00016045001 | |
| 26642 chr1 manual_curation CDS 36352442 36352530 . + 1 Parent=GSCOCT00016045001 | |
| 26643 chr1 manual_curation CDS 36351185 36351677 . + 0 Parent=GSCOCT00016045001 | |
| 26644 chr1 manual_curation gene 36360237 36363048 . + . ID=GSCOCG00016044001;Name=Cc01_g19550 | |
| 26645 chr1 manual_curation mRNA 36360237 36363048 . + . ID=GSCOCT00016044001;Parent=GSCOCG00016044001;Name=Cc01_g19550 | |
| 26646 chr1 manual_curation polypeptide 36360360 36362829 . + . ID=GSCOCP00016044001;Dbxref=TAIR:AT1G03180.1,TrEMBL:B9H875,TrEMBL:D7TPE9,TrEMBL:I1JNT6;Derives_from=GSCOCT00016044001;Name=Cc01_g19550;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B Has 36 Blast hits to 36 proteins in 15 species,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016044001~ unknown protein%3B Has 36 Blast hits to 36 proteins in 15 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 3%3B Fungi - 0%3B Plants - 33%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(890686..890831%2C890479..890536%2C890086..890385%2C889893..889947%2C889716..889810%2C889130..889251%2C888362..888425));owner=coffea | |
| 26647 chr1 manual_curation exon 36362766 36363048 . + . Parent=GSCOCT00016044001 | |
| 26648 chr1 manual_curation exon 36361940 36362061 . + . Parent=GSCOCT00016044001 | |
| 26649 chr1 manual_curation exon 36361381 36361475 . + . Parent=GSCOCT00016044001 | |
| 26650 chr1 manual_curation exon 36361244 36361298 . + . Parent=GSCOCT00016044001 | |
| 26651 chr1 manual_curation exon 36360806 36361105 . + . Parent=GSCOCT00016044001 | |
| 26652 chr1 manual_curation exon 36360655 36360712 . + . Parent=GSCOCT00016044001 | |
| 26653 chr1 manual_curation exon 36360237 36360505 . + . Parent=GSCOCT00016044001 | |
| 26654 chr1 manual_curation CDS 36362766 36362829 . + 2 Parent=GSCOCT00016044001 | |
| 26655 chr1 manual_curation CDS 36361940 36362061 . + 0 Parent=GSCOCT00016044001 | |
| 26656 chr1 manual_curation CDS 36361381 36361475 . + 1 Parent=GSCOCT00016044001 | |
| 26657 chr1 manual_curation CDS 36361244 36361298 . + 0 Parent=GSCOCT00016044001 | |
| 26658 chr1 manual_curation CDS 36360806 36361105 . + 0 Parent=GSCOCT00016044001 | |
| 26659 chr1 manual_curation CDS 36360655 36360712 . + 2 Parent=GSCOCT00016044001 | |
| 26660 chr1 manual_curation CDS 36360360 36360505 . + 0 Parent=GSCOCT00016044001 | |
| 26661 chr1 manual_curation gene 36363790 36369981 . + . ID=GSCOCG00016043001;Name=Cc01_g19560 | |
| 26662 chr1 manual_curation mRNA 36363790 36369981 . + . ID=GSCOCT00016043001;Parent=GSCOCG00016043001;Name=Cc01_g19560 | |
| 26663 chr1 manual_curation polypeptide 36363940 36369904 . + . ID=GSCOCP00016043001;Dbxref=InterPro:IPR001945,InterPro:IPR002464,InterPro:IPR006554,InterPro:IPR006555,InterPro:IPR010614,InterPro:IPR010643,InterPro:IPR013020,InterPro:IPR014013,PFAM:PF06733,PFAM:PF06777,PRINTS:PR00852,PROFILE:PS51193,PROSITE:PS00690,SMART:SM00488,SMART:SM00491,SwissProt:A6QLJ0,SwissProt:Q60452,SwissProt:Q8W4M7,TAIR:AT1G03190.1,TAIR:AT1G20720.1,TAIR:AT1G79950.1,TIGRFAMs:TIGR00604,TrEMBL:B9S438,TrEMBL:F6HQ82,TrEMBL:I1MP75;Derives_from=GSCOCT00016043001;Name=Cc01_g19560;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0003677,GO:0004003,GO:0005524,GO:0005634,GO:0006289,GO:0008026,CC_EC_number:missing_EC_number,PRODUCT:DNA repair helicase UVH6,CC_functional_completeness:complete,CC_gene:UVH6,CC_gene:ERCC2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016043001~ DNA repair helicase UVH6~ UVH6~ complete;original_location=complement(join(886718..887251%2C886280..886560%2C885867..885949%2C885371..885774%2C884825..885018%2C884525..884705%2C884207..884331%2C883519..883608%2C882821..882899%2C882665..882741%2C882038..882146%2C881287..881403));owner=coffea | |
| 26664 chr1 manual_curation exon 36369788 36369981 . + . Parent=GSCOCT00016043001 | |
| 26665 chr1 manual_curation exon 36369045 36369153 . + . Parent=GSCOCT00016043001 | |
| 26666 chr1 manual_curation exon 36368450 36368526 . + . Parent=GSCOCT00016043001 | |
| 26667 chr1 manual_curation exon 36368292 36368370 . + . Parent=GSCOCT00016043001 | |
| 26668 chr1 manual_curation exon 36367583 36367672 . + . Parent=GSCOCT00016043001 | |
| 26669 chr1 manual_curation exon 36366860 36366984 . + . Parent=GSCOCT00016043001 | |
| 26670 chr1 manual_curation exon 36366486 36366666 . + . Parent=GSCOCT00016043001 | |
| 26671 chr1 manual_curation exon 36366173 36366366 . + . Parent=GSCOCT00016043001 | |
| 26672 chr1 manual_curation exon 36365417 36365820 . + . Parent=GSCOCT00016043001 | |
| 26673 chr1 manual_curation exon 36365242 36365324 . + . Parent=GSCOCT00016043001 | |
| 26674 chr1 manual_curation exon 36364631 36364911 . + . Parent=GSCOCT00016043001 | |
| 26675 chr1 manual_curation exon 36363790 36364473 . + . Parent=GSCOCT00016043001 | |
| 26676 chr1 manual_curation CDS 36369788 36369904 . + 0 Parent=GSCOCT00016043001 | |
| 26677 chr1 manual_curation CDS 36369045 36369153 . + 2 Parent=GSCOCT00016043001 | |
| 26678 chr1 manual_curation CDS 36368450 36368526 . + 0 Parent=GSCOCT00016043001 | |
| 26679 chr1 manual_curation CDS 36368292 36368370 . + 2 Parent=GSCOCT00016043001 | |
| 26680 chr1 manual_curation CDS 36367583 36367672 . + 2 Parent=GSCOCT00016043001 | |
| 26681 chr1 manual_curation CDS 36366860 36366984 . + 0 Parent=GSCOCT00016043001 | |
| 26682 chr1 manual_curation CDS 36366486 36366666 . + 2 Parent=GSCOCT00016043001 | |
| 26683 chr1 manual_curation CDS 36366173 36366366 . + 0 Parent=GSCOCT00016043001 | |
| 26684 chr1 manual_curation CDS 36365417 36365820 . + 1 Parent=GSCOCT00016043001 | |
| 26685 chr1 manual_curation CDS 36365242 36365324 . + 2 Parent=GSCOCT00016043001 | |
| 26686 chr1 manual_curation CDS 36364631 36364911 . + 0 Parent=GSCOCT00016043001 | |
| 26687 chr1 manual_curation CDS 36363940 36364473 . + 0 Parent=GSCOCT00016043001 | |
| 26688 chr1 manual_curation gene 36374063 36380152 . - . ID=GSCOCG00016042001;Name=Cc01_g19570 | |
| 26689 chr1 manual_curation mRNA 36374063 36380152 . - . ID=GSCOCT00016042001;Parent=GSCOCG00016042001;Name=Cc01_g19570 | |
| 26690 chr1 manual_curation polypeptide 36374293 36379733 . - . ID=GSCOCP00016042001;Dbxref=GENE3D:G3DSA:4.10.280.10,InterPro:IPR001092,InterPro:IPR011598,PFAM:PF00010,PROFILE:PS50888,SMART:SM00353,SUPERFAMILY:SSF47459,SwissProt:Q9CAD0,SwissProt:Q9FN69,SwissProt:Q9FT81,TAIR:AT1G63650.1,TAIR:AT4G09820.1,TAIR:AT5G41315.1,TrEMBL:A5AV02,TrEMBL:B7SNG3,TrEMBL:F6HQ81;Derives_from=GSCOCT00016042001;Name=Cc01_g19570;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0030528,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Transcription factor TT8,CC_functional_completeness:modules,CC_gene:TT8,CC_gene:GL3,CC_gene:BHLH2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016042001~ Transcription factor TT8~ TT8~ modules;original_location=join(871458..871564%2C871765..872028%2C873845..873941%2C874065..874079%2C874170..874265%2C874392..874989%2C875766..876655%2C876812..876898);owner=coffea | |
| 26691 chr1 manual_curation exon 36379627 36380152 . - . Parent=GSCOCT00016042001 | |
| 26692 chr1 manual_curation exon 36379163 36379426 . - . Parent=GSCOCT00016042001 | |
| 26693 chr1 manual_curation exon 36377250 36377346 . - . Parent=GSCOCT00016042001 | |
| 26694 chr1 manual_curation exon 36377112 36377126 . - . Parent=GSCOCT00016042001 | |
| 26695 chr1 manual_curation exon 36376926 36377021 . - . Parent=GSCOCT00016042001 | |
| 26696 chr1 manual_curation exon 36376202 36376799 . - . Parent=GSCOCT00016042001 | |
| 26697 chr1 manual_curation exon 36374536 36375425 . - . Parent=GSCOCT00016042001 | |
| 26698 chr1 manual_curation exon 36374063 36374379 . - . Parent=GSCOCT00016042001 | |
| 26699 chr1 manual_curation CDS 36379627 36379733 . - 0 Parent=GSCOCT00016042001 | |
| 26700 chr1 manual_curation CDS 36379163 36379426 . - 2 Parent=GSCOCT00016042001 | |
| 26701 chr1 manual_curation CDS 36377250 36377346 . - 2 Parent=GSCOCT00016042001 | |
| 26702 chr1 manual_curation CDS 36377112 36377126 . - 0 Parent=GSCOCT00016042001 | |
| 26703 chr1 manual_curation CDS 36376926 36377021 . - 0 Parent=GSCOCT00016042001 | |
| 26704 chr1 manual_curation CDS 36376202 36376799 . - 0 Parent=GSCOCT00016042001 | |
| 26705 chr1 manual_curation CDS 36374536 36375425 . - 1 Parent=GSCOCT00016042001 | |
| 26706 chr1 manual_curation CDS 36374293 36374379 . - 0 Parent=GSCOCT00016042001 | |
| 26707 chr1 manual_curation gene 36394848 36397174 . + . ID=GSCOCG00016041001;Name=Cc01_g19580 | |
| 26708 chr1 manual_curation mRNA 36394848 36397174 . + . ID=GSCOCT00016041001;Parent=GSCOCG00016041001;Name=Cc01_g19580 | |
| 26709 chr1 manual_curation polypeptide 36394974 36397174 . + . ID=GSCOCP00016041001;Dbxref=InterPro:IPR020966,PFAM:PF11744,SwissProt:O49696,SwissProt:Q9LS22,SwissProt:Q9LS23,TAIR:AT4G17970.1,TAIR:AT5G46600.1,TAIR:AT5G46610.1,TrEMBL:B9GSP9,TrEMBL:B9H873,TrEMBL:B9S440;Derives_from=GSCOCT00016041001;Name=Cc01_g19580;Ontology_term=CC_evidence_code:ISS,GO:0010044,CC_EC_number:missing_EC_number,PRODUCT:Predicted protein,CC_functional_completeness:complete,CC_gene:ALMT13,CC_gene:ALMT12,CC_gene:ALMT14;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016041001~ Predicted protein~ ALMT13~ complete;original_location=complement(join(855917..856217%2C855520..855660%2C855156..855428%2C854852..854952%2C854529..854672%2C854017..854346));owner=coffea | |
| 26710 chr1 manual_curation exon 36396845 36397174 . + . Parent=GSCOCT00016041001 | |
| 26711 chr1 manual_curation exon 36396519 36396662 . + . Parent=GSCOCT00016041001 | |
| 26712 chr1 manual_curation exon 36396239 36396339 . + . Parent=GSCOCT00016041001 | |
| 26713 chr1 manual_curation exon 36395763 36396035 . + . Parent=GSCOCT00016041001 | |
| 26714 chr1 manual_curation exon 36395531 36395671 . + . Parent=GSCOCT00016041001 | |
| 26715 chr1 manual_curation exon 36394848 36395274 . + . Parent=GSCOCT00016041001 | |
| 26716 chr1 manual_curation CDS 36396845 36397174 . + 0 Parent=GSCOCT00016041001 | |
| 26717 chr1 manual_curation CDS 36396519 36396662 . + 0 Parent=GSCOCT00016041001 | |
| 26718 chr1 manual_curation CDS 36396239 36396339 . + 1 Parent=GSCOCT00016041001 | |
| 26719 chr1 manual_curation CDS 36395763 36396035 . + 1 Parent=GSCOCT00016041001 | |
| 26720 chr1 manual_curation CDS 36395531 36395671 . + 1 Parent=GSCOCT00016041001 | |
| 26721 chr1 manual_curation CDS 36394974 36395274 . + 0 Parent=GSCOCT00016041001 | |
| 26722 chr1 manual_curation gene 36397753 36398304 . - . ID=GSCOCG00016040001;Name=Cc01_g19590 | |
| 26723 chr1 manual_curation mRNA 36397753 36398304 . - . ID=GSCOCT00016040001;Parent=GSCOCG00016040001;Name=Cc01_g19590 | |
| 26724 chr1 manual_curation polypeptide 36397795 36398304 . - . ID=GSCOCP00016040001;Dbxref=InterPro:IPR002902,PFAM:PF01657,SwissProt:A4ZDL6,TrEMBL:B9S441,TrEMBL:I1JFB4,TrEMBL:I1L830;Derives_from=GSCOCT00016040001;Name=Cc01_g19590;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Antifungal protein ginkbilobin-2,CC_functional_completeness:modules,CC_gene:GNK2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016040001~ Putative Antifungal protein ginkbilobin-2~ GNK2~ modules;original_location=852887..853396;owner=coffea | |
| 26725 chr1 manual_curation exon 36397753 36398304 . - . Parent=GSCOCT00016040001 | |
| 26726 chr1 manual_curation CDS 36397795 36398304 . - 0 Parent=GSCOCT00016040001 | |
| 26727 chr1 manual_curation gene 36399607 36403609 . - . ID=GSCOCG00016039001;Name=Cc01_g19600 | |
| 26728 chr1 manual_curation mRNA 36399607 36403609 . - . ID=GSCOCT00016039001;Parent=GSCOCG00016039001;Name=Cc01_g19600 | |
| 26729 chr1 manual_curation polypeptide 36400093 36403379 . - . ID=GSCOCP00016039001;Dbxref=InterPro:IPR004253,PFAM:PF03005,TAIR:AT3G06080.2,TAIR:AT3G11570.1,TAIR:AT5G19160.1,TrEMBL:A5AV05,TrEMBL:D7T6S6,TrEMBL:F6HQ78;Derives_from=GSCOCT00016039001;Name=Cc01_g19600;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:TRICHOME BIREFRINGENCE-LIKE 11,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016039001~ TRICHOME BIREFRINGENCE-LIKE 11~ unknown_gene~ complete;original_location=join(847812..848299%2C849153..849542%2C850237..850395%2C850717..851098);owner=coffea | |
| 26730 chr1 manual_curation exon 36402892 36403609 . - . Parent=GSCOCT00016039001 | |
| 26731 chr1 manual_curation exon 36401649 36402038 . - . Parent=GSCOCT00016039001 | |
| 26732 chr1 manual_curation exon 36400796 36400954 . - . Parent=GSCOCT00016039001 | |
| 26733 chr1 manual_curation exon 36399607 36400474 . - . Parent=GSCOCT00016039001 | |
| 26734 chr1 manual_curation CDS 36402892 36403379 . - 0 Parent=GSCOCT00016039001 | |
| 26735 chr1 manual_curation CDS 36401649 36402038 . - 2 Parent=GSCOCT00016039001 | |
| 26736 chr1 manual_curation CDS 36400796 36400954 . - 2 Parent=GSCOCT00016039001 | |
| 26737 chr1 manual_curation CDS 36400093 36400474 . - 2 Parent=GSCOCT00016039001 | |
| 26738 chr1 manual_curation gene 36412386 36414543 . - . ID=GSCOCG00016037001;Name=Cc01_g19610 | |
| 26739 chr1 manual_curation mRNA 36412386 36414543 . - . ID=GSCOCT00016037001;Parent=GSCOCG00016037001;Name=Cc01_g19610 | |
| 26740 chr1 manual_curation polypeptide 36412650 36413429 . - . ID=GSCOCP00016037001;Dbxref=SwissProt:Q2V3R1,SwissProt:Q9SIH5,SwissProt:Q9XIN8,TAIR:AT2G27310.1,TAIR:AT2G36090.1,TAIR:AT3G44326.1,TrEMBL:B9GSQ1,TrEMBL:B9S443,TrEMBL:F6HQ77;Derives_from=GSCOCT00016037001;Name=Cc01_g19610;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative F-box protein At2g27310,CC_functional_completeness:fragment,CC_gene:At2g27310,CC_gene:At2g36090,CC_gene:At3g44326;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016037001~ Putative F-box protein At2g27310~ At2g27310~ fragment;original_location=837762..838541;owner=coffea | |
| 26741 chr1 manual_curation exon 36412386 36414543 . - . Parent=GSCOCT00016037001 | |
| 26742 chr1 manual_curation CDS 36412650 36413429 . - 0 Parent=GSCOCT00016037001 | |
| 26743 chr1 manual_curation gene 36417425 36418071 . - . ID=GSCOCG00016035001;Name=Cc01_g19620 | |
| 26744 chr1 manual_curation mRNA 36417425 36418071 . - . ID=GSCOCT00016035001;Parent=GSCOCG00016035001;Name=Cc01_g19620 | |
| 26745 chr1 manual_curation polypeptide 36417643 36417870 . - . ID=GSCOCP00016035001;Dbxref=TAIR:AT3G52420.1,TrEMBL:A5BNG0,TrEMBL:B9S444,TrEMBL:F6HQ76;Derives_from=GSCOCT00016035001;Name=Cc01_g19620;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:outer envelope membrane protein 7,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016035001~ outer envelope membrane protein 7~ unknown_gene~ modules;original_location=833321..833548;owner=coffea | |
| 26746 chr1 manual_curation exon 36417425 36418071 . - . Parent=GSCOCT00016035001 | |
| 26747 chr1 manual_curation CDS 36417643 36417870 . - 0 Parent=GSCOCT00016035001 | |
| 26748 chr1 manual_curation gene 36418765 36421993 . - . ID=GSCOCG00016034001;Name=Cc01_g19630 | |
| 26749 chr1 manual_curation mRNA 36418765 36421993 . - . ID=GSCOCT00016034001;Parent=GSCOCG00016034001;Name=Cc01_g19630 | |
| 26750 chr1 manual_curation polypeptide 36419036 36421993 . - . ID=GSCOCP00016034001;Dbxref=InterPro:IPR001163,InterPro:IPR006649,InterPro:IPR010920,PFAM:PF01423,SMART:SM00651,SUPERFAMILY:SSF50182,SwissProt:P62314,SwissProt:P62315,SwissProt:Q4R5F6,TAIR:AT4G02840.2;Derives_from=GSCOCT00016034001;Name=Cc01_g19630;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Small nuclear ribonucleoprotein family protein,CC_functional_completeness:modules,CC_gene:Snrpd1,CC_gene:SNRPD1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016034001~ Small nuclear ribonucleoprotein family protein~ Snrpd1~ modules;original_location=join(829198..829436%2C829517..829593%2C831772..831963%2C832094..832155);owner=coffea | |
| 26751 chr1 manual_curation exon 36421755 36421993 . - . Parent=GSCOCT00016034001 | |
| 26752 chr1 manual_curation exon 36421598 36421674 . - . Parent=GSCOCT00016034001 | |
| 26753 chr1 manual_curation exon 36419228 36419419 . - . Parent=GSCOCT00016034001 | |
| 26754 chr1 manual_curation exon 36418765 36419097 . - . Parent=GSCOCT00016034001 | |
| 26755 chr1 manual_curation CDS 36421755 36421993 . - 0 Parent=GSCOCT00016034001 | |
| 26756 chr1 manual_curation CDS 36421598 36421674 . - 2 Parent=GSCOCT00016034001 | |
| 26757 chr1 manual_curation CDS 36419228 36419419 . - 1 Parent=GSCOCT00016034001 | |
| 26758 chr1 manual_curation CDS 36419036 36419097 . - 1 Parent=GSCOCT00016034001 | |
| 26759 chr1 manual_curation gene 36423021 36423831 . - . ID=GSCOCG00016033001;Name=Cc01_g19640 | |
| 26760 chr1 manual_curation mRNA 36423021 36423831 . - . ID=GSCOCT00016033001;Parent=GSCOCG00016033001;Name=Cc01_g19640 | |
| 26761 chr1 manual_curation polypeptide 36423064 36423831 . - . ID=GSCOCP00016033001;Dbxref=GENE3D:G3DSA:2.40.70.10,InterPro:IPR001461,InterPro:IPR009007,InterPro:IPR021109,PANTHER:PTHR13683,SUPERFAMILY:SSF50630,SwissProt:P13917,SwissProt:Q8RVH5,TAIR:AT1G03220.1,TAIR:AT1G03230.1,TAIR:AT5G48430.1,TrEMBL:A5ARQ0,TrEMBL:B9GSQ3,TrEMBL:F6HQ75;Derives_from=GSCOCT00016033001;Name=Cc01_g19640;Ontology_term=CC_evidence_code:ISS,GO:0004190,GO:0006508,CC_EC_number:missing_EC_number,PRODUCT:Putative Basic 7S globulin,CC_functional_completeness:fragment,CC_gene:BG;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016033001~ Putative Basic 7S globulin~ BG~ fragment;original_location=827360..828127;owner=coffea | |
| 26762 chr1 manual_curation exon 36423021 36423831 . - . Parent=GSCOCT00016033001 | |
| 26763 chr1 manual_curation CDS 36423064 36423831 . - 0 Parent=GSCOCT00016033001 | |
| 26764 chr1 manual_curation gene 36432716 36433379 . - . ID=GSCOCG00016031001;Name=Cc01_g19650 | |
| 26765 chr1 manual_curation mRNA 36432716 36433379 . - . ID=GSCOCT00016031001;Parent=GSCOCG00016031001;Name=Cc01_g19650 | |
| 26766 chr1 manual_curation polypeptide 36432716 36433379 . - . ID=GSCOCP00016031001;Dbxref=GENE3D:G3DSA:2.40.70.10,InterPro:IPR001461,InterPro:IPR009007,InterPro:IPR021109,PANTHER:PTHR13683,SUPERFAMILY:SSF50630,SwissProt:P13917,SwissProt:Q8RVH5,TAIR:AT1G03220.1,TAIR:AT1G03230.1,TrEMBL:B9GSQ3,TrEMBL:F6HZS5,TrEMBL:Q05929;Derives_from=GSCOCT00016031001;Name=Cc01_g19650;Ontology_term=CC_evidence_code:ISS,GO:0004190,GO:0006508,CC_EC_number:missing_EC_number,PRODUCT:Eukaryotic aspartyl protease family protein,CC_functional_completeness:fragment,CC_gene:BG;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016031001~ Eukaryotic aspartyl protease family protein~ BG~ fragment;original_location=join(817812..818308%2C818412..818475);owner=coffea | |
| 26767 chr1 manual_curation exon 36432883 36433379 . - . Parent=GSCOCT00016031001 | |
| 26768 chr1 manual_curation exon 36432716 36432779 . - . Parent=GSCOCT00016031001 | |
| 26769 chr1 manual_curation CDS 36432883 36433379 . - 0 Parent=GSCOCT00016031001 | |
| 26770 chr1 manual_curation CDS 36432716 36432779 . - 2 Parent=GSCOCT00016031001 | |
| 26771 chr1 manual_curation gene 36436342 36437673 . + . ID=GSCOCG00016030001;Name=Cc01_g19660 | |
| 26772 chr1 manual_curation mRNA 36436342 36437673 . + . ID=GSCOCT00016030001;Parent=GSCOCG00016030001;Name=Cc01_g19660 | |
| 26773 chr1 manual_curation polypeptide 36436342 36437673 . + . ID=GSCOCP00016030001;Dbxref=GENE3D:G3DSA:2.40.70.10,InterPro:IPR001461,InterPro:IPR009007,InterPro:IPR021109,PANTHER:PTHR13683,SUPERFAMILY:SSF50630,SwissProt:P13917,SwissProt:Q8RVH5,TAIR:AT1G03220.1,TAIR:AT1G03230.1,TAIR:AT5G19110.1,TrEMBL:A9PGW7,TrEMBL:B9N1R3,TrEMBL:I1JNS6;Derives_from=GSCOCT00016030001;Name=Cc01_g19660;Ontology_term=CC_evidence_code:ISS,GO:0004190,GO:0006508,CC_EC_number:missing_EC_number,PRODUCT:Putative Basic 7S globulin,CC_functional_completeness:complete,CC_gene:BG;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016030001~ Putative Basic 7S globulin~ BG~ complete;original_location=complement(813518..814849);owner=coffea | |
| 26774 chr1 manual_curation exon 36436342 36437673 . + . Parent=GSCOCT00016030001 | |
| 26775 chr1 manual_curation CDS 36436342 36437673 . + 0 Parent=GSCOCT00016030001 | |
| 26776 chr1 manual_curation gene 36446899 36449143 . - . ID=GSCOCG00016028001;Name=Cc01_g19670 | |
| 26777 chr1 manual_curation mRNA 36446899 36449143 . - . ID=GSCOCT00016028001;Parent=GSCOCG00016028001;Name=Cc01_g19670 | |
| 26778 chr1 manual_curation polypeptide 36447085 36448917 . - . ID=GSCOCP00016028001;Dbxref=InterPro:IPR003719,PANTHER:PTHR13774,PFAM:PF02567,PIR:PIRSF016184,SwissProt:Q9CXN7,SwissProt:Q9DCG6,SwissProt:Q9KG32,TAIR:AT1G03210.1,TAIR:AT4G02850.1,TAIR:AT4G02860.1,TIGRFAMs:TIGR00654,TrEMBL:B9S449,TrEMBL:D7TPD8,TrEMBL:F6HQ72;Derives_from=GSCOCT00016028001;Name=Cc01_g19670;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0009058,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized isomerase BH0283,CC_functional_completeness:complete,CC_gene:BH0283,CC_gene:Pbld1,CC_gene:Pbld2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016028001~ Putative Uncharacterized isomerase BH0283~ BH0283~ complete;original_location=join(802274..802303%2C802402..802605%2C802898..803209%2C803461..803622%2C803773..803856%2C803999..804106);owner=coffea | |
| 26779 chr1 manual_curation exon 36448888 36449143 . - . Parent=GSCOCT00016028001 | |
| 26780 chr1 manual_curation exon 36448586 36448789 . - . Parent=GSCOCT00016028001 | |
| 26781 chr1 manual_curation exon 36447982 36448293 . - . Parent=GSCOCT00016028001 | |
| 26782 chr1 manual_curation exon 36447569 36447730 . - . Parent=GSCOCT00016028001 | |
| 26783 chr1 manual_curation exon 36447335 36447418 . - . Parent=GSCOCT00016028001 | |
| 26784 chr1 manual_curation exon 36446899 36447192 . - . Parent=GSCOCT00016028001 | |
| 26785 chr1 manual_curation CDS 36448888 36448917 . - 0 Parent=GSCOCT00016028001 | |
| 26786 chr1 manual_curation CDS 36448586 36448789 . - 0 Parent=GSCOCT00016028001 | |
| 26787 chr1 manual_curation CDS 36447982 36448293 . - 0 Parent=GSCOCT00016028001 | |
| 26788 chr1 manual_curation CDS 36447569 36447730 . - 0 Parent=GSCOCT00016028001 | |
| 26789 chr1 manual_curation CDS 36447335 36447418 . - 0 Parent=GSCOCT00016028001 | |
| 26790 chr1 manual_curation CDS 36447085 36447192 . - 0 Parent=GSCOCT00016028001 | |
| 26791 chr1 manual_curation gene 36450114 36453716 . - . ID=GSCOCG00016027001;Name=Cc01_g19680 | |
| 26792 chr1 manual_curation mRNA 36450114 36453716 . - . ID=GSCOCT00016027001;Parent=GSCOCG00016027001;Name=Cc01_g19680 | |
| 26793 chr1 manual_curation polypeptide 36450671 36453452 . - . ID=GSCOCP00016027001;Dbxref=TAIR:AT1G03250.2,TrEMBL:A5BM09,TrEMBL:A9PI03,TrEMBL:D7TPD6;Derives_from=GSCOCT00016027001;Name=Cc01_g19680;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016027001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages.~ unknown_gene~ complete;original_location=join(797739..797811%2C798104..798174%2C798625..798733%2C798898..798980%2C799705..799863%2C800022..800123%2C800368..800520);owner=coffea | |
| 26794 chr1 manual_curation exon 36453380 36453716 . - . Parent=GSCOCT00016027001 | |
| 26795 chr1 manual_curation exon 36453017 36453087 . - . Parent=GSCOCT00016027001 | |
| 26796 chr1 manual_curation exon 36452458 36452566 . - . Parent=GSCOCT00016027001 | |
| 26797 chr1 manual_curation exon 36452211 36452293 . - . Parent=GSCOCT00016027001 | |
| 26798 chr1 manual_curation exon 36451328 36451486 . - . Parent=GSCOCT00016027001 | |
| 26799 chr1 manual_curation exon 36451068 36451169 . - . Parent=GSCOCT00016027001 | |
| 26800 chr1 manual_curation exon 36450114 36450823 . - . Parent=GSCOCT00016027001 | |
| 26801 chr1 manual_curation CDS 36453380 36453452 . - 0 Parent=GSCOCT00016027001 | |
| 26802 chr1 manual_curation CDS 36453017 36453087 . - 1 Parent=GSCOCT00016027001 | |
| 26803 chr1 manual_curation CDS 36452458 36452566 . - 0 Parent=GSCOCT00016027001 | |
| 26804 chr1 manual_curation CDS 36452211 36452293 . - 1 Parent=GSCOCT00016027001 | |
| 26805 chr1 manual_curation CDS 36451328 36451486 . - 0 Parent=GSCOCT00016027001 | |
| 26806 chr1 manual_curation CDS 36451068 36451169 . - 0 Parent=GSCOCT00016027001 | |
| 26807 chr1 manual_curation CDS 36450671 36450823 . - 0 Parent=GSCOCT00016027001 | |
| 26808 chr1 manual_curation gene 36455856 36459409 . + . ID=GSCOCG00016026001;Name=Cc01_g19690 | |
| 26809 chr1 manual_curation mRNA 36455856 36459409 . + . ID=GSCOCT00016026001;Parent=GSCOCG00016026001;Name=Cc01_g19690 | |
| 26810 chr1 manual_curation polypeptide 36456538 36458951 . + . ID=GSCOCP00016026001;Dbxref=InterPro:IPR001092,InterPro:IPR011598,PFAM:PF00010,PROFILE:PS50888,SMART:SM00353,SUPERFAMILY:SSF47459,SwissProt:Q8S3D5,SwissProt:Q9LSQ3,SwissProt:Q9ZUG9,TAIR:AT2G24260.1,TAIR:AT4G30980.1,TAIR:AT5G64980.1,TrEMBL:B9S450,TrEMBL:F6HQ71,TrEMBL:G7IEF8;Derives_from=GSCOCT00016026001;Name=Cc01_g19690;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0030528,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:BHLH69,CC_gene:BHLH66,CC_gene:BHLH82;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016026001~ Putative uncharacterized protein~ BHLH69~ complete;original_location=complement(join(794294..794653%2C794014..794079%2C793834..793926%2C793560..793625%2C793180..793245%2C792493..792552%2C792240..792407));owner=coffea | |
| 26811 chr1 manual_curation exon 36455856 36456017 . + . Parent=GSCOCT00016026001 | |
| 26812 chr1 manual_curation exon 36458784 36459409 . + . Parent=GSCOCT00016026001 | |
| 26813 chr1 manual_curation exon 36458639 36458698 . + . Parent=GSCOCT00016026001 | |
| 26814 chr1 manual_curation exon 36457946 36458011 . + . Parent=GSCOCT00016026001 | |
| 26815 chr1 manual_curation exon 36457566 36457631 . + . Parent=GSCOCT00016026001 | |
| 26816 chr1 manual_curation exon 36457265 36457357 . + . Parent=GSCOCT00016026001 | |
| 26817 chr1 manual_curation exon 36457112 36457177 . + . Parent=GSCOCT00016026001 | |
| 26818 chr1 manual_curation exon 36456490 36456897 . + . Parent=GSCOCT00016026001 | |
| 26819 chr1 manual_curation CDS 36458784 36458951 . + 0 Parent=GSCOCT00016026001 | |
| 26820 chr1 manual_curation CDS 36458639 36458698 . + 0 Parent=GSCOCT00016026001 | |
| 26821 chr1 manual_curation CDS 36457946 36458011 . + 0 Parent=GSCOCT00016026001 | |
| 26822 chr1 manual_curation CDS 36457566 36457631 . + 0 Parent=GSCOCT00016026001 | |
| 26823 chr1 manual_curation CDS 36457265 36457357 . + 0 Parent=GSCOCT00016026001 | |
| 26824 chr1 manual_curation CDS 36457112 36457177 . + 0 Parent=GSCOCT00016026001 | |
| 26825 chr1 manual_curation CDS 36456538 36456897 . + 0 Parent=GSCOCT00016026001 | |
| 26826 chr1 manual_curation gene 36466544 36468114 . - . ID=GSCOCG00016025001;Name=Cc01_g19700 | |
| 26827 chr1 manual_curation mRNA 36466544 36468114 . - . ID=GSCOCT00016025001;Parent=GSCOCG00016025001;Name=Cc01_g19700 | |
| 26828 chr1 manual_curation polypeptide 36466941 36467243 . - . ID=GSCOCP00016025001;Derives_from=GSCOCT00016025001;Name=Cc01_g19700;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016025001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=783948..784250;owner=coffea | |
| 26829 chr1 manual_curation exon 36466544 36468114 . - . Parent=GSCOCT00016025001 | |
| 26830 chr1 manual_curation CDS 36466941 36467243 . - 0 Parent=GSCOCT00016025001 | |
| 26831 chr1 manual_curation gene 36471562 36473443 . - . ID=GSCOCG00016024001;Name=Cc01_g19710 | |
| 26832 chr1 manual_curation mRNA 36471562 36473443 . - . ID=GSCOCT00016024001;Parent=GSCOCG00016024001;Name=Cc01_g19710 | |
| 26833 chr1 manual_curation polypeptide 36471746 36472303 . - . ID=GSCOCP00016024001;Dbxref=TrEMBL:B9GTD2,TrEMBL:B9T498,TrEMBL:G8A041;Derives_from=GSCOCT00016024001;Name=Cc01_g19710;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Predicted protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016024001~ Putative Predicted protein~ unknown_gene~ complete;original_location=778888..779445;owner=coffea | |
| 26834 chr1 manual_curation exon 36471562 36473443 . - . Parent=GSCOCT00016024001 | |
| 26835 chr1 manual_curation CDS 36471746 36472303 . - 0 Parent=GSCOCT00016024001 | |
| 26836 chr1 manual_curation gene 36475593 36481260 . + . ID=GSCOCG00016021001;Name=Cc01_g19720 | |
| 26837 chr1 manual_curation mRNA 36475593 36481260 . + . ID=GSCOCT00016021001;Parent=GSCOCG00016021001;Name=Cc01_g19720 | |
| 26838 chr1 manual_curation polypeptide 36476190 36480892 . + . ID=GSCOCP00016021001;Dbxref=InterPro:IPR000644,InterPro:IPR002550,PFAM:PF01595,PROFILE:PS51371,SwissProt:Q4V3C7,SwissProt:Q67XQ0,SwissProt:Q9ZVS8,TAIR:AT1G03270.1,TAIR:AT4G14230.1,TAIR:AT4G14240.1,TrEMBL:B9HMC7,TrEMBL:B9T4A2,TrEMBL:F6HQ68;Derives_from=GSCOCT00016021001;Name=Cc01_g19720;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:DUF21 domain-containing protein At4g14240,CC_functional_completeness:complete,CC_gene:CBSDUF1,CC_gene:CBSDUF2,CC_gene:CBSDUF4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016021001~ DUF21 domain-containing protein At4g14240~ CBSDUF1~ complete;original_location=complement(join(774932..775001%2C774671..774747%2C774111..774194%2C773895..774008%2C773704..773787%2C773240..773311%2C772720..772787%2C771663..771750%2C771483..771556%2C771041..771416%2C770743..770789%2C770537..770619%2C770299..770342));owner=coffea | |
| 26839 chr1 manual_curation exon 36480849 36481260 . + . Parent=GSCOCT00016021001 | |
| 26840 chr1 manual_curation exon 36480572 36480654 . + . Parent=GSCOCT00016021001 | |
| 26841 chr1 manual_curation exon 36480402 36480448 . + . Parent=GSCOCT00016021001 | |
| 26842 chr1 manual_curation exon 36479775 36480150 . + . Parent=GSCOCT00016021001 | |
| 26843 chr1 manual_curation exon 36479635 36479708 . + . Parent=GSCOCT00016021001 | |
| 26844 chr1 manual_curation exon 36479441 36479528 . + . Parent=GSCOCT00016021001 | |
| 26845 chr1 manual_curation exon 36478404 36478471 . + . Parent=GSCOCT00016021001 | |
| 26846 chr1 manual_curation exon 36477880 36477951 . + . Parent=GSCOCT00016021001 | |
| 26847 chr1 manual_curation exon 36477404 36477487 . + . Parent=GSCOCT00016021001 | |
| 26848 chr1 manual_curation exon 36477183 36477296 . + . Parent=GSCOCT00016021001 | |
| 26849 chr1 manual_curation exon 36476997 36477080 . + . Parent=GSCOCT00016021001 | |
| 26850 chr1 manual_curation exon 36476444 36476520 . + . Parent=GSCOCT00016021001 | |
| 26851 chr1 manual_curation exon 36475593 36476259 . + . Parent=GSCOCT00016021001 | |
| 26852 chr1 manual_curation CDS 36480849 36480892 . + 1 Parent=GSCOCT00016021001 | |
| 26853 chr1 manual_curation CDS 36480572 36480654 . + 2 Parent=GSCOCT00016021001 | |
| 26854 chr1 manual_curation CDS 36480402 36480448 . + 0 Parent=GSCOCT00016021001 | |
| 26855 chr1 manual_curation CDS 36479775 36480150 . + 2 Parent=GSCOCT00016021001 | |
| 26856 chr1 manual_curation CDS 36479635 36479708 . + 0 Parent=GSCOCT00016021001 | |
| 26857 chr1 manual_curation CDS 36479441 36479528 . + 2 Parent=GSCOCT00016021001 | |
| 26858 chr1 manual_curation CDS 36478404 36478471 . + 0 Parent=GSCOCT00016021001 | |
| 26859 chr1 manual_curation CDS 36477880 36477951 . + 0 Parent=GSCOCT00016021001 | |
| 26860 chr1 manual_curation CDS 36477404 36477487 . + 0 Parent=GSCOCT00016021001 | |
| 26861 chr1 manual_curation CDS 36477183 36477296 . + 0 Parent=GSCOCT00016021001 | |
| 26862 chr1 manual_curation CDS 36476997 36477080 . + 0 Parent=GSCOCT00016021001 | |
| 26863 chr1 manual_curation CDS 36476444 36476520 . + 1 Parent=GSCOCT00016021001 | |
| 26864 chr1 manual_curation CDS 36476190 36476259 . + 0 Parent=GSCOCT00016021001 | |
| 26865 chr1 manual_curation gene 36482673 36488858 . + . ID=GSCOCG00016020001;Name=Cc01_g19730 | |
| 26866 chr1 manual_curation mRNA 36482673 36488858 . + . ID=GSCOCT00016020001;Parent=GSCOCG00016020001;Name=Cc01_g19730 | |
| 26867 chr1 manual_curation polypeptide 36483704 36488622 . + . ID=GSCOCP00016020001;Dbxref=InterPro:IPR003892,PROFILE:PS51140,TAIR:AT1G03290.1,TAIR:AT4G02880.2,TAIR:AT5G64980.1,TrEMBL:B9IA20,TrEMBL:D7TPD0,TrEMBL:I1L822;Derives_from=GSCOCT00016020001;Name=Cc01_g19730;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016020001~ Putative unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02880.2)%3B Has 13587 Blast hits to 10183 proteins in 1114 species: Archae - 257%3B Bacteria - 2402%3B Metazoa - 5637%3B Fungi - 960%3B Plants - 675%3B Viruses - 54%3B Other Eukaryotes - 3602 (source: NCBI BLink).~ unknown_gene~ modules;original_location=complement(join(767440..767487%2C766691..766853%2C765756..766573%2C765111..765284%2C764897..765013%2C764288..764467%2C764160..764206%2C762569..762890));owner=coffea | |
| 26868 chr1 manual_curation exon 36482673 36483163 . + . Parent=GSCOCT00016020001 | |
| 26869 chr1 manual_curation exon 36488301 36488858 . + . Parent=GSCOCT00016020001 | |
| 26870 chr1 manual_curation exon 36486985 36487031 . + . Parent=GSCOCT00016020001 | |
| 26871 chr1 manual_curation exon 36486724 36486903 . + . Parent=GSCOCT00016020001 | |
| 26872 chr1 manual_curation exon 36486178 36486294 . + . Parent=GSCOCT00016020001 | |
| 26873 chr1 manual_curation exon 36485907 36486080 . + . Parent=GSCOCT00016020001 | |
| 26874 chr1 manual_curation exon 36484618 36485435 . + . Parent=GSCOCT00016020001 | |
| 26875 chr1 manual_curation exon 36484338 36484500 . + . Parent=GSCOCT00016020001 | |
| 26876 chr1 manual_curation exon 36483679 36483751 . + . Parent=GSCOCT00016020001 | |
| 26877 chr1 manual_curation CDS 36488301 36488622 . + 2 Parent=GSCOCT00016020001 | |
| 26878 chr1 manual_curation CDS 36486985 36487031 . + 0 Parent=GSCOCT00016020001 | |
| 26879 chr1 manual_curation CDS 36486724 36486903 . + 0 Parent=GSCOCT00016020001 | |
| 26880 chr1 manual_curation CDS 36486178 36486294 . + 0 Parent=GSCOCT00016020001 | |
| 26881 chr1 manual_curation CDS 36485907 36486080 . + 0 Parent=GSCOCT00016020001 | |
| 26882 chr1 manual_curation CDS 36484618 36485435 . + 1 Parent=GSCOCT00016020001 | |
| 26883 chr1 manual_curation CDS 36484338 36484500 . + 0 Parent=GSCOCT00016020001 | |
| 26884 chr1 manual_curation CDS 36483704 36483751 . + 0 Parent=GSCOCT00016020001 | |
| 26885 chr1 manual_curation gene 36491413 36495141 . - . ID=GSCOCG00016018001;Name=Cc01_g19740 | |
| 26886 chr1 manual_curation mRNA 36491413 36495141 . - . ID=GSCOCT00016018001;Parent=GSCOCG00016018001;Name=Cc01_g19740 | |
| 26887 chr1 manual_curation polypeptide 36491908 36494983 . - . ID=GSCOCP00016018001;Dbxref=GENE3D:G3DSA:3.40.30.10,InterPro:IPR000889,InterPro:IPR012335,InterPro:IPR012336,PANTHER:PTHR11592,PFAM:PF00255,PIR:PIRSF000303,PRINTS:PR01011,PROFILE:PS51355,PROSITE:PS00460,PROSITE:PS00763,SUPERFAMILY:SSF52833,SwissProt:P30708,SwissProt:Q8L910,SwissProt:Q9LYB4,TAIR:AT2G48150.1,TAIR:AT3G63080.1,TAIR:AT4G11600.1,TrEMBL:A9PFP2,TrEMBL:B9T4A6,TrEMBL:C6SY48;Derives_from=GSCOCT00016018001;Name=Cc01_g19740;Ontology_term=CC_evidence_code:ISS,GO:0004602,GO:0006979,GO:0055114,CC_EC_number:1.11.1.12,PRODUCT:Probable glutathione peroxidase 4,CC_functional_completeness:complete,CC_gene:GPX4,CC_gene:GPX5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016018001~ Probable glutathione peroxidase 4~ GPX4~ complete;original_location=join(756208..756261%2C756353..756429%2C756763..756824%2C756907..757025%2C757643..757810%2C759251..759283);owner=coffea | |
| 26888 chr1 manual_curation exon 36494930 36495141 . - . Parent=GSCOCT00016018001 | |
| 26889 chr1 manual_curation exon 36494762 36494838 . - . Parent=GSCOCT00016018001 | |
| 26890 chr1 manual_curation exon 36494367 36494428 . - . Parent=GSCOCT00016018001 | |
| 26891 chr1 manual_curation exon 36494166 36494284 . - . Parent=GSCOCT00016018001 | |
| 26892 chr1 manual_curation exon 36493381 36493548 . - . Parent=GSCOCT00016018001 | |
| 26893 chr1 manual_curation exon 36491413 36491940 . - . Parent=GSCOCT00016018001 | |
| 26894 chr1 manual_curation CDS 36494930 36494983 . - 0 Parent=GSCOCT00016018001 | |
| 26895 chr1 manual_curation CDS 36494762 36494838 . - 0 Parent=GSCOCT00016018001 | |
| 26896 chr1 manual_curation CDS 36494367 36494428 . - 2 Parent=GSCOCT00016018001 | |
| 26897 chr1 manual_curation CDS 36494166 36494284 . - 1 Parent=GSCOCT00016018001 | |
| 26898 chr1 manual_curation CDS 36493381 36493548 . - 0 Parent=GSCOCT00016018001 | |
| 26899 chr1 manual_curation CDS 36491908 36491940 . - 0 Parent=GSCOCT00016018001 | |
| 26900 chr1 manual_curation gene 36505767 36517389 . - . ID=GSCOCG00016016001;Name=Cc01_g19750 | |
| 26901 chr1 manual_curation mRNA 36505767 36517389 . - . ID=GSCOCT00016016001;Parent=GSCOCG00016016001;Name=Cc01_g19750 | |
| 26902 chr1 manual_curation polypeptide 36505992 36517043 . - . ID=GSCOCP00016016001;Dbxref=InterPro:IPR000313,InterPro:IPR006569,PFAM:PF00855,PROFILE:PS50812,PROFILE:PS51391,SMART:SM00293,SMART:SM00582,TAIR:AT2G48160.1,TAIR:AT3G63070.1,TAIR:AT5G23150.1,TrEMBL:B9T4A6,TrEMBL:F6HQ67,TrEMBL:I1JNS1;Derives_from=GSCOCT00016016001;Name=Cc01_g19750;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016016001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=join(734148..734270%2C735768..735844%2C737204..739219%2C739409..739871%2C742443..742551%2C742667..742779%2C742885..743072%2C743273..743756%2C743880..744333%2C744444..744611%2C745174..745199);owner=coffea | |
| 26903 chr1 manual_curation exon 36505767 36505857 . - . Parent=GSCOCT00016016001 | |
| 26904 chr1 manual_curation exon 36516921 36517389 . - . Parent=GSCOCT00016016001 | |
| 26905 chr1 manual_curation exon 36515347 36515423 . - . Parent=GSCOCT00016016001 | |
| 26906 chr1 manual_curation exon 36511972 36513987 . - . Parent=GSCOCT00016016001 | |
| 26907 chr1 manual_curation exon 36511320 36511782 . - . Parent=GSCOCT00016016001 | |
| 26908 chr1 manual_curation exon 36508640 36508748 . - . Parent=GSCOCT00016016001 | |
| 26909 chr1 manual_curation exon 36508412 36508524 . - . Parent=GSCOCT00016016001 | |
| 26910 chr1 manual_curation exon 36508119 36508306 . - . Parent=GSCOCT00016016001 | |
| 26911 chr1 manual_curation exon 36507435 36507918 . - . Parent=GSCOCT00016016001 | |
| 26912 chr1 manual_curation exon 36506858 36507311 . - . Parent=GSCOCT00016016001 | |
| 26913 chr1 manual_curation exon 36506580 36506747 . - . Parent=GSCOCT00016016001 | |
| 26914 chr1 manual_curation exon 36505965 36506017 . - . Parent=GSCOCT00016016001 | |
| 26915 chr1 manual_curation CDS 36516921 36517043 . - 0 Parent=GSCOCT00016016001 | |
| 26916 chr1 manual_curation CDS 36515347 36515423 . - 0 Parent=GSCOCT00016016001 | |
| 26917 chr1 manual_curation CDS 36511972 36513987 . - 2 Parent=GSCOCT00016016001 | |
| 26918 chr1 manual_curation CDS 36511320 36511782 . - 2 Parent=GSCOCT00016016001 | |
| 26919 chr1 manual_curation CDS 36508640 36508748 . - 0 Parent=GSCOCT00016016001 | |
| 26920 chr1 manual_curation CDS 36508412 36508524 . - 1 Parent=GSCOCT00016016001 | |
| 26921 chr1 manual_curation CDS 36508119 36508306 . - 0 Parent=GSCOCT00016016001 | |
| 26922 chr1 manual_curation CDS 36507435 36507918 . - 2 Parent=GSCOCT00016016001 | |
| 26923 chr1 manual_curation CDS 36506858 36507311 . - 0 Parent=GSCOCT00016016001 | |
| 26924 chr1 manual_curation CDS 36506580 36506747 . - 1 Parent=GSCOCT00016016001 | |
| 26925 chr1 manual_curation CDS 36505992 36506017 . - 1 Parent=GSCOCT00016016001 | |
| 26926 chr1 manual_curation gene 36521608 36528135 . + . ID=GSCOCG00016015001;Name=Cc01_g19760 | |
| 26927 chr1 manual_curation mRNA 36521608 36528135 . + . ID=GSCOCT00016015001;Parent=GSCOCG00016015001;Name=Cc01_g19760 | |
| 26928 chr1 manual_curation polypeptide 36521608 36528135 . + . ID=GSCOCP00016015001;Dbxref=InterPro:IPR003864,PFAM:PF02714,SwissProt:Q09766,SwissProt:Q09809,SwissProt:Q12252,TAIR:AT1G11960.1,TAIR:AT3G21620.1,TAIR:AT4G02900.1,TrEMBL:D7M3B8,TrEMBL:F6HQ65,TrEMBL:Q9SY14;Derives_from=GSCOCT00016015001;Name=Cc01_g19760;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:ERD (early-responsive to dehydration stress) family protein,CC_functional_completeness:complete,CC_gene:SPAC2G11.09,CC_gene:SPAC24H6.13,CC_gene:PHM7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016015001~ ERD (early-responsive to dehydration stress) family protein~ SPAC2G11.09~ complete;original_location=complement(join(729270..729583%2C728945..729094%2C728266..728401%2C727087..727188%2C726715..726834%2C726507..726587%2C724991..725331%2C724480..724725%2C723892..724216%2C723488..723721%2C723056..723277));owner=coffea | |
| 26929 chr1 manual_curation exon 36527914 36528135 . + . Parent=GSCOCT00016015001 | |
| 26930 chr1 manual_curation exon 36527470 36527703 . + . Parent=GSCOCT00016015001 | |
| 26931 chr1 manual_curation exon 36526975 36527299 . + . Parent=GSCOCT00016015001 | |
| 26932 chr1 manual_curation exon 36526466 36526711 . + . Parent=GSCOCT00016015001 | |
| 26933 chr1 manual_curation exon 36525860 36526200 . + . Parent=GSCOCT00016015001 | |
| 26934 chr1 manual_curation exon 36524604 36524684 . + . Parent=GSCOCT00016015001 | |
| 26935 chr1 manual_curation exon 36524357 36524476 . + . Parent=GSCOCT00016015001 | |
| 26936 chr1 manual_curation exon 36524003 36524104 . + . Parent=GSCOCT00016015001 | |
| 26937 chr1 manual_curation exon 36522790 36522925 . + . Parent=GSCOCT00016015001 | |
| 26938 chr1 manual_curation exon 36522097 36522246 . + . Parent=GSCOCT00016015001 | |
| 26939 chr1 manual_curation exon 36521608 36521921 . + . Parent=GSCOCT00016015001 | |
| 26940 chr1 manual_curation CDS 36527914 36528135 . + 0 Parent=GSCOCT00016015001 | |
| 26941 chr1 manual_curation CDS 36527470 36527703 . + 0 Parent=GSCOCT00016015001 | |
| 26942 chr1 manual_curation CDS 36526975 36527299 . + 2 Parent=GSCOCT00016015001 | |
| 26943 chr1 manual_curation CDS 36526466 36526711 . + 2 Parent=GSCOCT00016015001 | |
| 26944 chr1 manual_curation CDS 36525860 36526200 . + 0 Parent=GSCOCT00016015001 | |
| 26945 chr1 manual_curation CDS 36524604 36524684 . + 0 Parent=GSCOCT00016015001 | |
| 26946 chr1 manual_curation CDS 36524357 36524476 . + 0 Parent=GSCOCT00016015001 | |
| 26947 chr1 manual_curation CDS 36524003 36524104 . + 0 Parent=GSCOCT00016015001 | |
| 26948 chr1 manual_curation CDS 36522790 36522925 . + 2 Parent=GSCOCT00016015001 | |
| 26949 chr1 manual_curation CDS 36522097 36522246 . + 2 Parent=GSCOCT00016015001 | |
| 26950 chr1 manual_curation CDS 36521608 36521921 . + 0 Parent=GSCOCT00016015001 | |
| 26951 chr1 manual_curation gene 36528721 36538532 . - . ID=GSCOCG00016014001;Name=Cc01_g19770 | |
| 26952 chr1 manual_curation mRNA 36528721 36538532 . - . ID=GSCOCT00016014001;Parent=GSCOCG00016014001;Name=Cc01_g19770 | |
| 26953 chr1 manual_curation polypeptide 36528942 36538168 . - . ID=GSCOCP00016014001;Dbxref=TAIR:AT2G48110.1,TAIR:AT3G23590.1,TrEMBL:B9RSS0,TrEMBL:F6HDK9,TrEMBL:F6HQ63;Derives_from=GSCOCT00016014001;Name=Cc01_g19770;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:REF4-related 1,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016014001~ REF4-related 1~ unknown_gene~ complete;original_location=join(713023..713324%2C713448..713558%2C713967..714314%2C714592..714911%2C715017..715108%2C716114..716471%2C716917..717127%2C718133..718247%2C718495..718656%2C719062..719722%2C720580..720786%2C721129..722249);owner=coffea | |
| 26954 chr1 manual_curation exon 36537867 36538532 . - . Parent=GSCOCT00016014001 | |
| 26955 chr1 manual_curation exon 36537633 36537743 . - . Parent=GSCOCT00016014001 | |
| 26956 chr1 manual_curation exon 36536877 36537224 . - . Parent=GSCOCT00016014001 | |
| 26957 chr1 manual_curation exon 36536280 36536599 . - . Parent=GSCOCT00016014001 | |
| 26958 chr1 manual_curation exon 36536083 36536174 . - . Parent=GSCOCT00016014001 | |
| 26959 chr1 manual_curation exon 36534720 36535077 . - . Parent=GSCOCT00016014001 | |
| 26960 chr1 manual_curation exon 36534064 36534274 . - . Parent=GSCOCT00016014001 | |
| 26961 chr1 manual_curation exon 36532944 36533058 . - . Parent=GSCOCT00016014001 | |
| 26962 chr1 manual_curation exon 36532535 36532696 . - . Parent=GSCOCT00016014001 | |
| 26963 chr1 manual_curation exon 36531469 36532129 . - . Parent=GSCOCT00016014001 | |
| 26964 chr1 manual_curation exon 36530405 36530611 . - . Parent=GSCOCT00016014001 | |
| 26965 chr1 manual_curation exon 36528721 36530062 . - . Parent=GSCOCT00016014001 | |
| 26966 chr1 manual_curation CDS 36537867 36538168 . - 0 Parent=GSCOCT00016014001 | |
| 26967 chr1 manual_curation CDS 36537633 36537743 . - 2 Parent=GSCOCT00016014001 | |
| 26968 chr1 manual_curation CDS 36536877 36537224 . - 2 Parent=GSCOCT00016014001 | |
| 26969 chr1 manual_curation CDS 36536280 36536599 . - 2 Parent=GSCOCT00016014001 | |
| 26970 chr1 manual_curation CDS 36536083 36536174 . - 1 Parent=GSCOCT00016014001 | |
| 26971 chr1 manual_curation CDS 36534720 36535077 . - 0 Parent=GSCOCT00016014001 | |
| 26972 chr1 manual_curation CDS 36534064 36534274 . - 1 Parent=GSCOCT00016014001 | |
| 26973 chr1 manual_curation CDS 36532944 36533058 . - 2 Parent=GSCOCT00016014001 | |
| 26974 chr1 manual_curation CDS 36532535 36532696 . - 0 Parent=GSCOCT00016014001 | |
| 26975 chr1 manual_curation CDS 36531469 36532129 . - 0 Parent=GSCOCT00016014001 | |
| 26976 chr1 manual_curation CDS 36530405 36530611 . - 1 Parent=GSCOCT00016014001 | |
| 26977 chr1 manual_curation CDS 36528942 36530062 . - 1 Parent=GSCOCT00016014001 | |
| 26978 chr1 manual_curation gene 36539088 36542872 . - . ID=GSCOCG00016013001;Name=Cc01_g19780 | |
| 26979 chr1 manual_curation mRNA 36539088 36542872 . - . ID=GSCOCT00016013001;Parent=GSCOCG00016013001;Name=Cc01_g19780 | |
| 26980 chr1 manual_curation polypeptide 36539235 36541858 . - . ID=GSCOCP00016013001;Dbxref=InterPro:IPR006055,InterPro:IPR012337,InterPro:IPR013520,PFAM:PF00929,SMART:SM00479,SUPERFAMILY:SSF53098,SwissProt:Q08237,SwissProt:Q5A3Q0,SwissProt:Q6BIK6,TAIR:AT2G48100.1,TAIR:AT3G27970.1,TAIR:AT5G40310.1,TrEMBL:B7FI33,TrEMBL:B9GTD6,TrEMBL:B9SFP5;Derives_from=GSCOCT00016013001;Name=Cc01_g19780;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0004527,GO:0005622,CC_EC_number:3.1.13.1,PRODUCT:Putative CDSuclease family protein,CC_functional_completeness:complete,CC_gene:REX4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016013001~ Putative CDSuclease family protein~ REX4~ complete;original_location=join(709333..709348%2C709423..709511%2C709695..709921%2C710012..710218%2C711035..711091%2C711644..711956);owner=coffea | |
| 26981 chr1 manual_curation exon 36542824 36542872 . - . Parent=GSCOCT00016013001 | |
| 26982 chr1 manual_curation exon 36541843 36542056 . - . Parent=GSCOCT00016013001 | |
| 26983 chr1 manual_curation exon 36541680 36541768 . - . Parent=GSCOCT00016013001 | |
| 26984 chr1 manual_curation exon 36541270 36541496 . - . Parent=GSCOCT00016013001 | |
| 26985 chr1 manual_curation exon 36540973 36541179 . - . Parent=GSCOCT00016013001 | |
| 26986 chr1 manual_curation exon 36540100 36540156 . - . Parent=GSCOCT00016013001 | |
| 26987 chr1 manual_curation exon 36539088 36539547 . - . Parent=GSCOCT00016013001 | |
| 26988 chr1 manual_curation CDS 36541843 36541858 . - 0 Parent=GSCOCT00016013001 | |
| 26989 chr1 manual_curation CDS 36541680 36541768 . - 1 Parent=GSCOCT00016013001 | |
| 26990 chr1 manual_curation CDS 36541270 36541496 . - 0 Parent=GSCOCT00016013001 | |
| 26991 chr1 manual_curation CDS 36540973 36541179 . - 2 Parent=GSCOCT00016013001 | |
| 26992 chr1 manual_curation CDS 36540100 36540156 . - 2 Parent=GSCOCT00016013001 | |
| 26993 chr1 manual_curation CDS 36539235 36539547 . - 2 Parent=GSCOCT00016013001 | |
| 26994 chr1 manual_curation gene 36542938 36544093 . - . ID=GSCOCG00016012001;Name=Cc01_g19790 | |
| 26995 chr1 manual_curation mRNA 36542938 36544093 . - . ID=GSCOCT00016012001;Parent=GSCOCG00016012001;Name=Cc01_g19790 | |
| 26996 chr1 manual_curation polypeptide 36543359 36544050 . - . ID=GSCOCP00016012001;Dbxref=InterPro:IPR006121,PFAM:PF00403;Derives_from=GSCOCT00016012001;Name=Cc01_g19790;Ontology_term=CC_evidence_code:ISS,GO:0030001,GO:0046872,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016012001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(707141..707174%2C707453..707832);owner=coffea | |
| 26997 chr1 manual_curation exon 36544017 36544093 . - . Parent=GSCOCT00016012001 | |
| 26998 chr1 manual_curation exon 36542938 36543738 . - . Parent=GSCOCT00016012001 | |
| 26999 chr1 manual_curation CDS 36544017 36544050 . - 0 Parent=GSCOCT00016012001 | |
| 27000 chr1 manual_curation CDS 36543359 36543738 . - 1 Parent=GSCOCT00016012001 | |
| 27001 chr1 manual_curation gene 36547853 36550714 . - . ID=GSCOCG00016010001;Name=Cc01_g19800 | |
| 27002 chr1 manual_curation mRNA 36547853 36550714 . - . ID=GSCOCT00016010001;Parent=GSCOCG00016010001;Name=Cc01_g19800 | |
| 27003 chr1 manual_curation polypeptide 36548312 36550447 . - . ID=GSCOCP00016010001;Dbxref=InterPro:IPR001163,InterPro:IPR006649,InterPro:IPR010920,InterPro:IPR016654,PFAM:PF01423,PIR:PIRSF016394,SMART:SM00651,SUPERFAMILY:SSF50182,SwissProt:O35900,SwissProt:Q54TF6,SwissProt:Q9Y333,TrEMBL:Q9ZVT4;Derives_from=GSCOCT00016010001;Name=Cc01_g19800;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:U6 snRNA-associated Sm-like protein LSm2,CC_functional_completeness:modules,CC_gene:Lsm2,CC_gene:LSM2,CC_gene:lsm2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016010001~ U6 snRNA-associated Sm-like protein LSm2~ Lsm2~ modules;original_location=join(700744..700806%2C700903..701061%2C702760..702879);owner=coffea | |
| 27004 chr1 manual_curation exon 36550385 36550714 . - . Parent=GSCOCT00016010001 | |
| 27005 chr1 manual_curation exon 36550130 36550288 . - . Parent=GSCOCT00016010001 | |
| 27006 chr1 manual_curation exon 36547853 36548431 . - . Parent=GSCOCT00016010001 | |
| 27007 chr1 manual_curation CDS 36550385 36550447 . - 0 Parent=GSCOCT00016010001 | |
| 27008 chr1 manual_curation CDS 36550130 36550288 . - 0 Parent=GSCOCT00016010001 | |
| 27009 chr1 manual_curation CDS 36548312 36548431 . - 0 Parent=GSCOCT00016010001 | |
| 27010 chr1 manual_curation gene 36552561 36558129 . - . ID=GSCOCG00016009001;Name=Cc01_g19810 | |
| 27011 chr1 manual_curation mRNA 36552561 36558129 . - . ID=GSCOCT00016009001;Parent=GSCOCG00016009001;Name=Cc01_g19810 | |
| 27012 chr1 manual_curation polypeptide 36553033 36557696 . - . ID=GSCOCP00016009001;Dbxref=GENE3D:G3DSA:2.60.210.10,GENE3D:G3DSA:3.30.710.10,InterPro:IPR000210,InterPro:IPR002083,InterPro:IPR008974,InterPro:IPR011333,InterPro:IPR013069,InterPro:IPR013089,InterPro:IPR013322,PANTHER:PTHR23230,PFAM:PF00651,PFAM:PF00917,PROFILE:PS50097,PROFILE:PS50144,SMART:SM00061,SMART:SM00225,SUPERFAMILY:SSF49599,SUPERFAMILY:SSF54695,SwissProt:O22286,SwissProt:Q8L765,SwissProt:Q9M8J9,TAIR:AT2G39760.1,TAIR:AT3G06190.1,TAIR:AT5G19000.2,TrEMBL:D7TPA6,TrEMBL:I1JNR6,TrEMBL:I1N9E8;Derives_from=GSCOCT00016009001;Name=Cc01_g19810;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:BTB/POZ and MATH domain-containing protein 2,CC_functional_completeness:complete,CC_gene:BPM2,CC_gene:BPM1,CC_gene:BPM3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016009001~ BTB/POZ and MATH domain-containing protein 2~ BPM2~ complete;original_location=join(693495..693919%2C695349..695697%2C697083..697359%2C697980..698158);owner=coffea | |
| 27013 chr1 manual_curation exon 36557272 36558129 . - . Parent=GSCOCT00016009001 | |
| 27014 chr1 manual_curation exon 36555494 36555842 . - . Parent=GSCOCT00016009001 | |
| 27015 chr1 manual_curation exon 36553832 36554108 . - . Parent=GSCOCT00016009001 | |
| 27016 chr1 manual_curation exon 36552561 36553211 . - . Parent=GSCOCT00016009001 | |
| 27017 chr1 manual_curation CDS 36557272 36557696 . - 0 Parent=GSCOCT00016009001 | |
| 27018 chr1 manual_curation CDS 36555494 36555842 . - 2 Parent=GSCOCT00016009001 | |
| 27019 chr1 manual_curation CDS 36553832 36554108 . - 0 Parent=GSCOCT00016009001 | |
| 27020 chr1 manual_curation CDS 36553033 36553211 . - 1 Parent=GSCOCT00016009001 | |
| 27021 chr1 manual_curation gene 36559919 36564023 . + . ID=GSCOCG00016007001;Name=Cc01_g19820 | |
| 27022 chr1 manual_curation mRNA 36559919 36564023 . + . ID=GSCOCT00016007001;Parent=GSCOCG00016007001;Name=Cc01_g19820 | |
| 27023 chr1 manual_curation polypeptide 36560143 36563644 . + . ID=GSCOCP00016007001;Dbxref=TAIR:AT1G03340.1,TAIR:AT4G02920.2,TrEMBL:B9IA14,TrEMBL:B9SFP1,TrEMBL:D7TPA4;Derives_from=GSCOCT00016007001;Name=Cc01_g19820;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016007001~ Putative unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03340.1)%3B Has 41 Blast hits to 41 proteins in 12 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 41%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(690956..691048%2C690036..690216%2C689275..689734%2C688983..689048%2C687547..688045));owner=coffea | |
| 27024 chr1 manual_curation exon 36563146 36564023 . + . Parent=GSCOCT00016007001 | |
| 27025 chr1 manual_curation exon 36562143 36562208 . + . Parent=GSCOCT00016007001 | |
| 27026 chr1 manual_curation exon 36561457 36561916 . + . Parent=GSCOCT00016007001 | |
| 27027 chr1 manual_curation exon 36560975 36561155 . + . Parent=GSCOCT00016007001 | |
| 27028 chr1 manual_curation exon 36559919 36560235 . + . Parent=GSCOCT00016007001 | |
| 27029 chr1 manual_curation CDS 36563146 36563644 . + 2 Parent=GSCOCT00016007001 | |
| 27030 chr1 manual_curation CDS 36562143 36562208 . + 2 Parent=GSCOCT00016007001 | |
| 27031 chr1 manual_curation CDS 36561457 36561916 . + 1 Parent=GSCOCT00016007001 | |
| 27032 chr1 manual_curation CDS 36560975 36561155 . + 0 Parent=GSCOCT00016007001 | |
| 27033 chr1 manual_curation CDS 36560143 36560235 . + 0 Parent=GSCOCT00016007001 | |
| 27034 chr1 manual_curation gene 36564726 36570175 . - . ID=GSCOCG00016006001;Name=Cc01_g19830 | |
| 27035 chr1 manual_curation mRNA 36564726 36570175 . - . ID=GSCOCT00016006001;Parent=GSCOCG00016006001;Name=Cc01_g19830 | |
| 27036 chr1 manual_curation polypeptide 36565137 36570059 . - . ID=GSCOCP00016006001;Dbxref=InterPro:IPR000795,InterPro:IPR004160,InterPro:IPR004161,InterPro:IPR004541,InterPro:IPR005225,InterPro:IPR009000,InterPro:IPR009001,PANTHER:PTHR23115:SF31,PFAM:PF00009,PFAM:PF03143,PFAM:PF03144,PRINTS:PR00315,PROSITE:PS00301,SUPERFAMILY:SSF50447,SUPERFAMILY:SSF50465,SwissProt:A5V604,SwissProt:Q0BUQ2,SwissProt:Q9ZT91,TAIR:AT4G02930.1,TAIR:AT4G20360.1,TAIR:AT5G60390.1,TIGRFAMs:TIGR00231,TIGRFAMs:TIGR00485,TrEMBL:A5BV56,TrEMBL:B9GTD8,TrEMBL:B9SFP0;Derives_from=GSCOCT00016006001;Name=Cc01_g19830;Ontology_term=CC_evidence_code:ISS,GO:0003746,GO:0003924,GO:0005525,GO:0005622,GO:0006414,CC_EC_number:2.7.7.4,PRODUCT:Elongation factor Tu%2C mitochondrial,CC_functional_completeness:complete,CC_gene:TUFA,CC_gene:tuf;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016006001~ Elongation factor Tu%2C mitochondrial~ TUFA~ complete;original_location=join(681132..681316%2C681819..681894%2C681974..682066%2C682160..682234%2C682725..682829%2C682920..683010%2C683127..683332%2C683721..683804%2C684383..684445%2C684524..684586%2C684938..685178%2C685984..686054);owner=coffea | |
| 27037 chr1 manual_curation exon 36569875 36570175 . - . Parent=GSCOCT00016006001 | |
| 27038 chr1 manual_curation exon 36569297 36569372 . - . Parent=GSCOCT00016006001 | |
| 27039 chr1 manual_curation exon 36569125 36569217 . - . Parent=GSCOCT00016006001 | |
| 27040 chr1 manual_curation exon 36568957 36569031 . - . Parent=GSCOCT00016006001 | |
| 27041 chr1 manual_curation exon 36568362 36568466 . - . Parent=GSCOCT00016006001 | |
| 27042 chr1 manual_curation exon 36568181 36568271 . - . Parent=GSCOCT00016006001 | |
| 27043 chr1 manual_curation exon 36567859 36568064 . - . Parent=GSCOCT00016006001 | |
| 27044 chr1 manual_curation exon 36567387 36567470 . - . Parent=GSCOCT00016006001 | |
| 27045 chr1 manual_curation exon 36566746 36566808 . - . Parent=GSCOCT00016006001 | |
| 27046 chr1 manual_curation exon 36566605 36566667 . - . Parent=GSCOCT00016006001 | |
| 27047 chr1 manual_curation exon 36566013 36566253 . - . Parent=GSCOCT00016006001 | |
| 27048 chr1 manual_curation exon 36564726 36565207 . - . Parent=GSCOCT00016006001 | |
| 27049 chr1 manual_curation CDS 36569875 36570059 . - 0 Parent=GSCOCT00016006001 | |
| 27050 chr1 manual_curation CDS 36569297 36569372 . - 2 Parent=GSCOCT00016006001 | |
| 27051 chr1 manual_curation CDS 36569125 36569217 . - 0 Parent=GSCOCT00016006001 | |
| 27052 chr1 manual_curation CDS 36568957 36569031 . - 0 Parent=GSCOCT00016006001 | |
| 27053 chr1 manual_curation CDS 36568362 36568466 . - 0 Parent=GSCOCT00016006001 | |
| 27054 chr1 manual_curation CDS 36568181 36568271 . - 0 Parent=GSCOCT00016006001 | |
| 27055 chr1 manual_curation CDS 36567859 36568064 . - 1 Parent=GSCOCT00016006001 | |
| 27056 chr1 manual_curation CDS 36567387 36567470 . - 0 Parent=GSCOCT00016006001 | |
| 27057 chr1 manual_curation CDS 36566746 36566808 . - 0 Parent=GSCOCT00016006001 | |
| 27058 chr1 manual_curation CDS 36566605 36566667 . - 0 Parent=GSCOCT00016006001 | |
| 27059 chr1 manual_curation CDS 36566013 36566253 . - 0 Parent=GSCOCT00016006001 | |
| 27060 chr1 manual_curation CDS 36565137 36565207 . - 1 Parent=GSCOCT00016006001 | |
| 27061 chr1 manual_curation gene 36570967 36575997 . + . ID=GSCOCG00016005001;Name=Cc01_g19840 | |
| 27062 chr1 manual_curation mRNA 36570967 36575997 . + . ID=GSCOCT00016005001;Parent=GSCOCG00016005001;Name=Cc01_g19840 | |
| 27063 chr1 manual_curation polypeptide 36571388 36575406 . + . ID=GSCOCP00016005001;Dbxref=InterPro:IPR001841,InterPro:IPR022170,PFAM:PF12483,PROFILE:PS50089,SwissProt:Q4R7G8,SwissProt:Q6NTT6,SwissProt:Q969V5,TAIR:AT1G59560.1,TAIR:AT1G63900.2,TrEMBL:D7KSY2,TrEMBL:D7TPA0,TrEMBL:Q8L7N4;Derives_from=GSCOCT00016005001;Name=Cc01_g19840;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative Mitochondrial ubiquitin ligase activator of NFKB 1,CC_functional_completeness:complete,CC_gene:MUL1,CC_gene:mul1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016005001~ Putative Mitochondrial ubiquitin ligase activator of NFKB 1~ MUL1~ complete;original_location=complement(join(679727..679803%2C679524..679576%2C678443..678567%2C678257..678352%2C677966..678103%2C677806..677871%2C677001..677113%2C676484..676594%2C676253..676296%2C676057..676165%2C675785..675887));owner=coffea | |
| 27064 chr1 manual_curation exon 36575304 36575997 . + . Parent=GSCOCT00016005001 | |
| 27065 chr1 manual_curation exon 36575026 36575134 . + . Parent=GSCOCT00016005001 | |
| 27066 chr1 manual_curation exon 36574895 36574938 . + . Parent=GSCOCT00016005001 | |
| 27067 chr1 manual_curation exon 36574597 36574707 . + . Parent=GSCOCT00016005001 | |
| 27068 chr1 manual_curation exon 36574078 36574190 . + . Parent=GSCOCT00016005001 | |
| 27069 chr1 manual_curation exon 36573320 36573385 . + . Parent=GSCOCT00016005001 | |
| 27070 chr1 manual_curation exon 36573088 36573225 . + . Parent=GSCOCT00016005001 | |
| 27071 chr1 manual_curation exon 36572839 36572934 . + . Parent=GSCOCT00016005001 | |
| 27072 chr1 manual_curation exon 36572624 36572748 . + . Parent=GSCOCT00016005001 | |
| 27073 chr1 manual_curation exon 36571615 36571667 . + . Parent=GSCOCT00016005001 | |
| 27074 chr1 manual_curation exon 36570967 36571464 . + . Parent=GSCOCT00016005001 | |
| 27075 chr1 manual_curation CDS 36575304 36575406 . + 2 Parent=GSCOCT00016005001 | |
| 27076 chr1 manual_curation CDS 36575026 36575134 . + 1 Parent=GSCOCT00016005001 | |
| 27077 chr1 manual_curation CDS 36574895 36574938 . + 2 Parent=GSCOCT00016005001 | |
| 27078 chr1 manual_curation CDS 36574597 36574707 . + 2 Parent=GSCOCT00016005001 | |
| 27079 chr1 manual_curation CDS 36574078 36574190 . + 0 Parent=GSCOCT00016005001 | |
| 27080 chr1 manual_curation CDS 36573320 36573385 . + 0 Parent=GSCOCT00016005001 | |
| 27081 chr1 manual_curation CDS 36573088 36573225 . + 0 Parent=GSCOCT00016005001 | |
| 27082 chr1 manual_curation CDS 36572839 36572934 . + 0 Parent=GSCOCT00016005001 | |
| 27083 chr1 manual_curation CDS 36572624 36572748 . + 1 Parent=GSCOCT00016005001 | |
| 27084 chr1 manual_curation CDS 36571615 36571667 . + 2 Parent=GSCOCT00016005001 | |
| 27085 chr1 manual_curation CDS 36571388 36571464 . + 0 Parent=GSCOCT00016005001 | |
| 27086 chr1 manual_curation gene 36576295 36577715 . - . ID=GSCOCG00016004001;Name=Cc01_g19850 | |
| 27087 chr1 manual_curation mRNA 36576295 36577715 . - . ID=GSCOCT00016004001;Parent=GSCOCG00016004001;Name=Cc01_g19850 | |
| 27088 chr1 manual_curation polypeptide 36576295 36576480 . - . ID=GSCOCP00016004001;Derives_from=GSCOCT00016004001;Name=Cc01_g19850;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016004001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=674711..674896;owner=coffea | |
| 27089 chr1 manual_curation exon 36576295 36577715 . - . Parent=GSCOCT00016004001 | |
| 27090 chr1 manual_curation CDS 36576295 36576480 . - 0 Parent=GSCOCT00016004001 | |
| 27091 chr1 manual_curation gene 36588093 36594718 . + . ID=GSCOCG00016003001;Name=Cc01_g19860 | |
| 27092 chr1 manual_curation mRNA 36588093 36594718 . + . ID=GSCOCT00016003001;Parent=GSCOCG00016003001;Name=Cc01_g19860 | |
| 27093 chr1 manual_curation polypeptide 36588415 36594417 . + . ID=GSCOCP00016003001;Dbxref=InterPro:IPR005123,PFAM:PF03171,TAIR:AT1G14710.1,TAIR:AT2G48080.1,TAIR:AT4G02940.1,TrEMBL:B9SFN5,TrEMBL:F6HQ53,TrEMBL:I1L811;Derives_from=GSCOCT00016003001;Name=Cc01_g19860;Ontology_term=CC_evidence_code:ISS,GO:0016491,CC_EC_number:missing_EC_number,PRODUCT:oxidoreductase%2C 2OG-Fe(II) oxygenase family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016003001~ oxidoreductase%2C 2OG-Fe(II) oxygenase family protein~ unknown_gene~ complete;original_location=complement(join(662167..662776%2C659044..659144%2C658721..658838%2C658181..658294%2C657923..658038%2C657603..657757%2C656774..657245));owner=coffea | |
| 27094 chr1 manual_curation exon 36593946 36594718 . + . Parent=GSCOCT00016003001 | |
| 27095 chr1 manual_curation exon 36593434 36593588 . + . Parent=GSCOCT00016003001 | |
| 27096 chr1 manual_curation exon 36593153 36593268 . + . Parent=GSCOCT00016003001 | |
| 27097 chr1 manual_curation exon 36592897 36593010 . + . Parent=GSCOCT00016003001 | |
| 27098 chr1 manual_curation exon 36592353 36592470 . + . Parent=GSCOCT00016003001 | |
| 27099 chr1 manual_curation exon 36592047 36592147 . + . Parent=GSCOCT00016003001 | |
| 27100 chr1 manual_curation exon 36588093 36589024 . + . Parent=GSCOCT00016003001 | |
| 27101 chr1 manual_curation CDS 36593946 36594417 . + 2 Parent=GSCOCT00016003001 | |
| 27102 chr1 manual_curation CDS 36593434 36593588 . + 0 Parent=GSCOCT00016003001 | |
| 27103 chr1 manual_curation CDS 36593153 36593268 . + 1 Parent=GSCOCT00016003001 | |
| 27104 chr1 manual_curation CDS 36592897 36593010 . + 1 Parent=GSCOCT00016003001 | |
| 27105 chr1 manual_curation CDS 36592353 36592470 . + 0 Parent=GSCOCT00016003001 | |
| 27106 chr1 manual_curation CDS 36592047 36592147 . + 1 Parent=GSCOCT00016003001 | |
| 27107 chr1 manual_curation CDS 36588415 36589024 . + 0 Parent=GSCOCT00016003001 | |
| 27108 chr1 manual_curation gene 36594947 36597430 . - . ID=GSCOCG00016002001;Name=Cc01_g19870 | |
| 27109 chr1 manual_curation mRNA 36594947 36597430 . - . ID=GSCOCT00016002001;Parent=GSCOCG00016002001;Name=Cc01_g19870 | |
| 27110 chr1 manual_curation polypeptide 36595778 36597337 . - . ID=GSCOCP00016002001;Dbxref=InterPro:IPR005607,PFAM:PF03909,PROFILE:PS50858,SMART:SM00751,SwissProt:A2BIJ3,SwissProt:Q3SX22,SwissProt:Q5ZIK6,TAIR:AT1G03350.1,TAIR:AT4G13110.1,TrEMBL:F6HQ52,TrEMBL:G7IFQ3,TrEMBL:I1MFB4;Derives_from=GSCOCT00016002001;Name=Cc01_g19870;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative BSD domain-containing protein,CC_functional_completeness:complete,CC_gene:bsdc1,CC_gene:BSDC1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016002001~ Putative BSD domain-containing protein~ bsdc1~ complete;original_location=653854..655413;owner=coffea | |
| 27111 chr1 manual_curation exon 36594947 36597430 . - . Parent=GSCOCT00016002001 | |
| 27112 chr1 manual_curation CDS 36595778 36597337 . - 0 Parent=GSCOCT00016002001 | |
| 27113 chr1 manual_curation gene 36601891 36602703 . - . ID=GSCOCG00016000001;Name=Cc01_g19880 | |
| 27114 chr1 manual_curation mRNA 36601891 36602703 . - . ID=GSCOCT00016000001;Parent=GSCOCG00016000001;Name=Cc01_g19880 | |
| 27115 chr1 manual_curation polypeptide 36601891 36602703 . - . ID=GSCOCP00016000001;Dbxref=InterPro:IPR002495,PFAM:PF01501,SwissProt:O04253,SwissProt:Q8VYF4,SwissProt:Q9M8J2,TAIR:AT3G06260.1,TAIR:AT3G62660.1,TAIR:AT4G02130.1,TrEMBL:B9HKM7,TrEMBL:B9SFN1,TrEMBL:F6HDK1;Derives_from=GSCOCT00016000001;Name=Cc01_g19880;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Probable galacturonosyltransferase-like 4,CC_functional_completeness:fragment,CC_gene:GATL4,CC_gene:GATL6,CC_gene:GATL7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016000001~ Probable galacturonosyltransferase-like 4~ GATL4~ fragment;original_location=648488..649300;owner=coffea | |
| 27116 chr1 manual_curation exon 36601891 36602703 . - . Parent=GSCOCT00016000001 | |
| 27117 chr1 manual_curation CDS 36601891 36602703 . - 0 Parent=GSCOCT00016000001 | |
| 27118 chr1 manual_curation gene 36644526 36648029 . + . ID=GSCOCG00015999001;Name=Cc01_g19890 | |
| 27119 chr1 manual_curation mRNA 36644526 36648029 . + . ID=GSCOCT00015999001;Parent=GSCOCG00015999001;Name=Cc01_g19890 | |
| 27120 chr1 manual_curation polypeptide 36644526 36647642 . + . ID=GSCOCP00015999001;Dbxref=InterPro:IPR005135,PFAM:PF03372,SUPERFAMILY:SSF56219,TAIR:AT2G48030.1,TAIR:AT3G21530.1,TrEMBL:B9IA01,TrEMBL:B9SFL5,TrEMBL:F6HQ43;Derives_from=GSCOCT00015999001;Name=Cc01_g19890;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:DNAse I-like superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015999001~ DNAse I-like superfamily protein~ unknown_gene~ complete;original_location=complement(join(605755..606665%2C604195..604402%2C603953..604082%2C603549..603811));owner=coffea | |
| 27121 chr1 manual_curation exon 36647380 36648029 . + . Parent=GSCOCT00015999001 | |
| 27122 chr1 manual_curation exon 36647109 36647238 . + . Parent=GSCOCT00015999001 | |
| 27123 chr1 manual_curation exon 36646789 36646996 . + . Parent=GSCOCT00015999001 | |
| 27124 chr1 manual_curation exon 36644526 36645436 . + . Parent=GSCOCT00015999001 | |
| 27125 chr1 manual_curation CDS 36647380 36647642 . + 1 Parent=GSCOCT00015999001 | |
| 27126 chr1 manual_curation CDS 36647109 36647238 . + 0 Parent=GSCOCT00015999001 | |
| 27127 chr1 manual_curation CDS 36646789 36646996 . + 2 Parent=GSCOCT00015999001 | |
| 27128 chr1 manual_curation CDS 36644526 36645436 . + 0 Parent=GSCOCT00015999001 | |
| 27129 chr1 manual_curation gene 36653095 36659389 . - . ID=GSCOCG00015998001;Name=Cc01_g19900 | |
| 27130 chr1 manual_curation mRNA 36653095 36659389 . - . ID=GSCOCT00015998001;Parent=GSCOCG00015998001;Name=Cc01_g19900 | |
| 27131 chr1 manual_curation polypeptide 36653460 36657800 . - . ID=GSCOCP00015998001;Dbxref=InterPro:IPR003663,InterPro:IPR005828,InterPro:IPR005829,InterPro:IPR016196,InterPro:IPR020846,PFAM:PF00083,PRINTS:PR00171,PROFILE:PS50850,PROSITE:PS00216,SUPERFAMILY:SSF103473,SwissProt:P93051,SwissProt:Q0WQ63,SwissProt:Q8LBI9,TAIR:AT2G48020.2,TAIR:AT3G05150.1,TAIR:AT5G18840.1,TIGRFAMs:TIGR00879,TrEMBL:B9GTB1,TrEMBL:B9SFL0,TrEMBL:Q9LEG2;Derives_from=GSCOCT00015998001;Name=Cc01_g19900;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006810,GO:0016020,GO:0016021,GO:0022891,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Sugar transporter ERD6-like 7,CC_functional_completeness:complete,CC_gene:At2g48020,CC_gene:At5g18840,CC_gene:At3g05150;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015998001~ Sugar transporter ERD6-like 7~ At2g48020~ complete;original_location=join(593391..593447%2C593569..593631%2C594235..594324%2C594438..594497%2C594629..594694%2C594770..594835%2C594966..595041%2C595183..595247%2C595343..595435%2C595526..595606%2C595814..595898%2C596345..596388%2C596500..596562%2C596653..596712%2C596802..596855%2C597031..597090%2C597184..597298%2C597610..597731);owner=coffea | |
| 27132 chr1 manual_curation exon 36659008 36659389 . - . Parent=GSCOCT00015998001 | |
| 27133 chr1 manual_curation exon 36657744 36657971 . - . Parent=GSCOCT00015998001 | |
| 27134 chr1 manual_curation exon 36657560 36657622 . - . Parent=GSCOCT00015998001 | |
| 27135 chr1 manual_curation exon 36656867 36656956 . - . Parent=GSCOCT00015998001 | |
| 27136 chr1 manual_curation exon 36656694 36656753 . - . Parent=GSCOCT00015998001 | |
| 27137 chr1 manual_curation exon 36656497 36656562 . - . Parent=GSCOCT00015998001 | |
| 27138 chr1 manual_curation exon 36656356 36656421 . - . Parent=GSCOCT00015998001 | |
| 27139 chr1 manual_curation exon 36656150 36656225 . - . Parent=GSCOCT00015998001 | |
| 27140 chr1 manual_curation exon 36655944 36656008 . - . Parent=GSCOCT00015998001 | |
| 27141 chr1 manual_curation exon 36655756 36655848 . - . Parent=GSCOCT00015998001 | |
| 27142 chr1 manual_curation exon 36655585 36655665 . - . Parent=GSCOCT00015998001 | |
| 27143 chr1 manual_curation exon 36655293 36655377 . - . Parent=GSCOCT00015998001 | |
| 27144 chr1 manual_curation exon 36654803 36654846 . - . Parent=GSCOCT00015998001 | |
| 27145 chr1 manual_curation exon 36654629 36654691 . - . Parent=GSCOCT00015998001 | |
| 27146 chr1 manual_curation exon 36654479 36654538 . - . Parent=GSCOCT00015998001 | |
| 27147 chr1 manual_curation exon 36654336 36654389 . - . Parent=GSCOCT00015998001 | |
| 27148 chr1 manual_curation exon 36654101 36654160 . - . Parent=GSCOCT00015998001 | |
| 27149 chr1 manual_curation exon 36653893 36654007 . - . Parent=GSCOCT00015998001 | |
| 27150 chr1 manual_curation exon 36653095 36653581 . - . Parent=GSCOCT00015998001 | |
| 27151 chr1 manual_curation CDS 36657744 36657800 . - 0 Parent=GSCOCT00015998001 | |
| 27152 chr1 manual_curation CDS 36657560 36657622 . - 0 Parent=GSCOCT00015998001 | |
| 27153 chr1 manual_curation CDS 36656867 36656956 . - 0 Parent=GSCOCT00015998001 | |
| 27154 chr1 manual_curation CDS 36656694 36656753 . - 0 Parent=GSCOCT00015998001 | |
| 27155 chr1 manual_curation CDS 36656497 36656562 . - 0 Parent=GSCOCT00015998001 | |
| 27156 chr1 manual_curation CDS 36656356 36656421 . - 0 Parent=GSCOCT00015998001 | |
| 27157 chr1 manual_curation CDS 36656150 36656225 . - 0 Parent=GSCOCT00015998001 | |
| 27158 chr1 manual_curation CDS 36655944 36656008 . - 1 Parent=GSCOCT00015998001 | |
| 27159 chr1 manual_curation CDS 36655756 36655848 . - 0 Parent=GSCOCT00015998001 | |
| 27160 chr1 manual_curation CDS 36655585 36655665 . - 0 Parent=GSCOCT00015998001 | |
| 27161 chr1 manual_curation CDS 36655293 36655377 . - 0 Parent=GSCOCT00015998001 | |
| 27162 chr1 manual_curation CDS 36654803 36654846 . - 1 Parent=GSCOCT00015998001 | |
| 27163 chr1 manual_curation CDS 36654629 36654691 . - 0 Parent=GSCOCT00015998001 | |
| 27164 chr1 manual_curation CDS 36654479 36654538 . - 0 Parent=GSCOCT00015998001 | |
| 27165 chr1 manual_curation CDS 36654336 36654389 . - 0 Parent=GSCOCT00015998001 | |
| 27166 chr1 manual_curation CDS 36654101 36654160 . - 0 Parent=GSCOCT00015998001 | |
| 27167 chr1 manual_curation CDS 36653893 36654007 . - 0 Parent=GSCOCT00015998001 | |
| 27168 chr1 manual_curation CDS 36653460 36653581 . - 1 Parent=GSCOCT00015998001 | |
| 27169 chr1 manual_curation gene 36665251 36665882 . - . ID=GSCOCG00015997001;Name=Cc01_g19910 | |
| 27170 chr1 manual_curation mRNA 36665251 36665882 . - . ID=GSCOCT00015997001;Parent=GSCOCG00015997001;Name=Cc01_g19910 | |
| 27171 chr1 manual_curation polypeptide 36665251 36665882 . - . ID=GSCOCP00015997001;Dbxref=InterPro:IPR011032,SUPERFAMILY:SSF50129,SwissProt:P80572,SwissProt:P93629,SwissProt:Q96533,TAIR:AT1G22430.1,TAIR:AT5G24760.1,TAIR:AT5G43940.2,TrEMBL:A5BL32,TrEMBL:E9RKC1;Derives_from=GSCOCT00015997001;Name=Cc01_g19910;Ontology_term=CC_evidence_code:ISS,CC_EC_number:1.1.1.284,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:ADH2,CC_gene:FDH;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015997001~ Hypothetical protein~ ADH2~ missing_functional_completeness;original_location=join(585309..585402%2C585592..585737%2C585824..585940);owner=coffea | |
| 27172 chr1 manual_curation exon 36665789 36665882 . - . Parent=GSCOCT00015997001 | |
| 27173 chr1 manual_curation exon 36665454 36665599 . - . Parent=GSCOCT00015997001 | |
| 27174 chr1 manual_curation exon 36665251 36665367 . - . Parent=GSCOCT00015997001 | |
| 27175 chr1 manual_curation CDS 36665789 36665882 . - 0 Parent=GSCOCT00015997001 | |
| 27176 chr1 manual_curation CDS 36665454 36665599 . - 1 Parent=GSCOCT00015997001 | |
| 27177 chr1 manual_curation CDS 36665251 36665367 . - 0 Parent=GSCOCT00015997001 | |
| 27178 chr1 manual_curation gene 36665945 36669548 . - . ID=GSCOCG00015996001;Name=Cc01_g19920 | |
| 27179 chr1 manual_curation mRNA 36665945 36669548 . - . ID=GSCOCT00015996001;Parent=GSCOCG00015996001;Name=Cc01_g19920 | |
| 27180 chr1 manual_curation polypeptide 36666836 36668782 . - . ID=GSCOCP00015996001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:O04086,SwissProt:P93050,SwissProt:Q3EDL4,TAIR:AT1G11050.1,TAIR:AT1G56120.1,TAIR:AT2G48010.1,TrEMBL:B9I9Z6,TrEMBL:B9P5S2,TrEMBL:F6HQ41;Derives_from=GSCOCT00015996001;Name=Cc01_g19920;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.10.2,PRODUCT:Probable LRR receptor-like serine/threonine-protein kinase RKF3,CC_functional_completeness:complete,CC_gene:RKF3,CC_gene:At1g11050,CC_gene:At1g01540;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015996001~ Probable LRR receptor-like serine/threonine-protein kinase RKF3~ RKF3~ complete;original_location=582409..584355;owner=coffea | |
| 27181 chr1 manual_curation exon 36665945 36669548 . - . Parent=GSCOCT00015996001 | |
| 27182 chr1 manual_curation CDS 36666836 36668782 . - 0 Parent=GSCOCT00015996001 | |
| 27183 chr1 manual_curation gene 36673600 36677477 . + . ID=GSCOCG00015995001;Name=Cc01_g19930 | |
| 27184 chr1 manual_curation mRNA 36673600 36677477 . + . ID=GSCOCT00015995001;Parent=GSCOCG00015995001;Name=Cc01_g19930 | |
| 27185 chr1 manual_curation polypeptide 36674660 36676775 . + . ID=GSCOCP00015995001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR020635,PFAM:PF07714,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q5XF57,SwissProt:Q8H1D6,SwissProt:Q8RXC8,TAIR:AT3G05140.1,TAIR:AT5G18910.1,TAIR:AT5G35960.1,TrEMBL:B9I9Z5,TrEMBL:B9SFK8,TrEMBL:D7TP81;Derives_from=GSCOCT00015995001;Name=Cc01_g19930;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Receptor-like cytosolic serine/threonine-protein kinase RBK2,CC_functional_completeness:fragment,CC_gene:RBK2,CC_gene:RBK1,CC_gene:At5g57670;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015995001~ Receptor-like cytosolic serine/threonine-protein kinase RBK2~ RBK2~ fragment;original_location=complement(join(576174..576531%2C575842..576093%2C575286..575440%2C575019..575098%2C574786..574921%2C574537..574687%2C574416..574447));owner=coffea | |
| 27186 chr1 manual_curation exon 36676744 36677477 . + . Parent=GSCOCT00015995001 | |
| 27187 chr1 manual_curation exon 36676504 36676654 . + . Parent=GSCOCT00015995001 | |
| 27188 chr1 manual_curation exon 36676270 36676405 . + . Parent=GSCOCT00015995001 | |
| 27189 chr1 manual_curation exon 36676093 36676172 . + . Parent=GSCOCT00015995001 | |
| 27190 chr1 manual_curation exon 36675751 36675905 . + . Parent=GSCOCT00015995001 | |
| 27191 chr1 manual_curation exon 36675098 36675349 . + . Parent=GSCOCT00015995001 | |
| 27192 chr1 manual_curation exon 36673600 36675017 . + . Parent=GSCOCT00015995001 | |
| 27193 chr1 manual_curation CDS 36676744 36676775 . + 1 Parent=GSCOCT00015995001 | |
| 27194 chr1 manual_curation CDS 36676504 36676654 . + 0 Parent=GSCOCT00015995001 | |
| 27195 chr1 manual_curation CDS 36676270 36676405 . + 2 Parent=GSCOCT00015995001 | |
| 27196 chr1 manual_curation CDS 36676093 36676172 . + 0 Parent=GSCOCT00015995001 | |
| 27197 chr1 manual_curation CDS 36675751 36675905 . + 1 Parent=GSCOCT00015995001 | |
| 27198 chr1 manual_curation CDS 36675098 36675349 . + 1 Parent=GSCOCT00015995001 | |
| 27199 chr1 manual_curation CDS 36674660 36675017 . + 0 Parent=GSCOCT00015995001 | |
| 27200 chr1 manual_curation gene 36683089 36685936 . + . ID=GSCOCG00015994001;Name=Cc01_g19940 | |
| 27201 chr1 manual_curation mRNA 36683089 36685936 . + . ID=GSCOCT00015994001;Parent=GSCOCG00015994001;Name=Cc01_g19940 | |
| 27202 chr1 manual_curation polypeptide 36683348 36684827 . + . ID=GSCOCP00015994001;Dbxref=InterPro:IPR008207,PFAM:PF01627,PROFILE:PS50894,SUPERFAMILY:SSF47226,SwissProt:Q8L9T7,SwissProt:Q9SAZ5,SwissProt:Q9ZNV9,TAIR:AT1G03430.1,TAIR:AT3G21510.1,TAIR:AT5G39340.1,TrEMBL:D7T6M0,TrEMBL:D7TP79,TrEMBL:Q94KS0;Derives_from=GSCOCT00015994001;Name=Cc01_g19940;Ontology_term=CC_evidence_code:ISS,GO:0000160,GO:0004871,CC_EC_number:missing_EC_number,PRODUCT:Histidine-containing phosphotransfer protein 1,CC_functional_completeness:complete,CC_gene:AHP1,CC_gene:AHP5,CC_gene:AHP3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015994001~ Histidine-containing phosphotransfer protein 1~ AHP1~ complete;original_location=complement(join(567784..567843%2C567538..567668%2C567347..567415%2C566971..567042%2C566828..566900%2C566364..566414));owner=coffea | |
| 27203 chr1 manual_curation exon 36684777 36685936 . + . Parent=GSCOCT00015994001 | |
| 27204 chr1 manual_curation exon 36684291 36684363 . + . Parent=GSCOCT00015994001 | |
| 27205 chr1 manual_curation exon 36684149 36684220 . + . Parent=GSCOCT00015994001 | |
| 27206 chr1 manual_curation exon 36683776 36683844 . + . Parent=GSCOCT00015994001 | |
| 27207 chr1 manual_curation exon 36683523 36683653 . + . Parent=GSCOCT00015994001 | |
| 27208 chr1 manual_curation exon 36683089 36683407 . + . Parent=GSCOCT00015994001 | |
| 27209 chr1 manual_curation CDS 36684777 36684827 . + 0 Parent=GSCOCT00015994001 | |
| 27210 chr1 manual_curation CDS 36684291 36684363 . + 2 Parent=GSCOCT00015994001 | |
| 27211 chr1 manual_curation CDS 36684149 36684220 . + 2 Parent=GSCOCT00015994001 | |
| 27212 chr1 manual_curation CDS 36683776 36683844 . + 2 Parent=GSCOCT00015994001 | |
| 27213 chr1 manual_curation CDS 36683523 36683653 . + 0 Parent=GSCOCT00015994001 | |
| 27214 chr1 manual_curation CDS 36683348 36683407 . + 0 Parent=GSCOCT00015994001 | |
| 27215 chr1 manual_curation gene 36686077 36687265 . + . ID=GSCOCG00015993001;Name=Cc01_g19950 | |
| 27216 chr1 manual_curation mRNA 36686077 36687265 . + . ID=GSCOCT00015993001;Parent=GSCOCG00015993001;Name=Cc01_g19950 | |
| 27217 chr1 manual_curation polypeptide 36687032 36687265 . + . ID=GSCOCP00015993001;Derives_from=GSCOCT00015993001;Name=Cc01_g19950;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015993001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(563926..564159);owner=coffea | |
| 27218 chr1 manual_curation exon 36686077 36686269 . + . Parent=GSCOCT00015993001 | |
| 27219 chr1 manual_curation exon 36686355 36687265 . + . Parent=GSCOCT00015993001 | |
| 27220 chr1 manual_curation CDS 36687032 36687265 . + 0 Parent=GSCOCT00015993001 | |
| 27221 chr1 manual_curation gene 36692065 36693288 . + . ID=GSCOCG00015991001;Name=Cc01_g19960 | |
| 27222 chr1 manual_curation mRNA 36692065 36693288 . + . ID=GSCOCT00015991001;Parent=GSCOCG00015991001;Name=Cc01_g19960 | |
| 27223 chr1 manual_curation polypeptide 36692065 36693288 . + . ID=GSCOCP00015991001;Dbxref=InterPro:IPR001611,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SwissProt:Q00874,SwissProt:Q42371,SwissProt:Q9SCT4,TAIR:AT1G03440.1,TAIR:AT3G17640.1,TAIR:AT4G03010.1,TrEMBL:B9I9Z3,TrEMBL:B9SFK4,TrEMBL:F6HQ38;Derives_from=GSCOCT00015991001;Name=Cc01_g19960;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative LRR receptor-like serine/threonine-protein kinase ERECTA,CC_functional_completeness:complete,CC_gene:ERECTA,CC_gene:IMK2,CC_gene:DRT100;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015991001~ Putative LRR receptor-like serine/threonine-protein kinase ERECTA~ ERECTA~ complete;original_location=complement(557903..559126);owner=coffea | |
| 27224 chr1 manual_curation exon 36692065 36693288 . + . Parent=GSCOCT00015991001 | |
| 27225 chr1 manual_curation CDS 36692065 36693288 . + 0 Parent=GSCOCT00015991001 | |
| 27226 chr1 manual_curation gene 36693518 36694075 . - . ID=GSCOCG00015990001;Name=Cc01_g19970 | |
| 27227 chr1 manual_curation mRNA 36693518 36694075 . - . ID=GSCOCT00015990001;Parent=GSCOCG00015990001;Name=Cc01_g19970 | |
| 27228 chr1 manual_curation polypeptide 36693845 36694075 . - . ID=GSCOCP00015990001;Derives_from=GSCOCT00015990001;Name=Cc01_g19970;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015990001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=557116..557346;owner=coffea | |
| 27229 chr1 manual_curation exon 36693518 36694075 . - . Parent=GSCOCT00015990001 | |
| 27230 chr1 manual_curation CDS 36693845 36694075 . - 0 Parent=GSCOCT00015990001 | |
| 27231 chr1 manual_curation gene 36695789 36702374 . - . ID=GSCOCG00015989001;Name=Cc01_g19980 | |
| 27232 chr1 manual_curation mRNA 36695789 36702374 . - . ID=GSCOCT00015989001;Parent=GSCOCG00015989001;Name=Cc01_g19980 | |
| 27233 chr1 manual_curation polypeptide 36696212 36701277 . - . ID=GSCOCP00015989001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR017399,InterPro:IPR017986,InterPro:IPR019781,InterPro:IPR019782,InterPro:IPR020472,PFAM:PF00400,PIR:PIRSF038135,PRINTS:PR00320,PROFILE:PS50082,PROFILE:PS50294,SMART:SM00320,SUPERFAMILY:SSF50978,SwissProt:O24467,SwissProt:Q40153,SwissProt:Q5E9I8,TAIR:AT2G43770.1,TAIR:AT3G49660.1,TAIR:AT4G03020.1,TrEMBL:B9I9Z2,TrEMBL:C6TA39,TrEMBL:F6HQ37;Derives_from=GSCOCT00015989001;Name=Cc01_g19980;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.7.11.7,PRODUCT:LEC14B protein,CC_functional_completeness:complete,CC_gene:DCAF11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015989001~ LEC14B protein~ DCAF11~ complete;original_location=join(549914..550342%2C550736..550855%2C551162..551239%2C551857..552033%2C552203..552280%2C552778..552953%2C554009..554167%2C554294..554354%2C554791..554979);owner=coffea | |
| 27234 chr1 manual_curation exon 36701910 36702374 . - . Parent=GSCOCT00015989001 | |
| 27235 chr1 manual_curation exon 36700849 36701374 . - . Parent=GSCOCT00015989001 | |
| 27236 chr1 manual_curation exon 36700336 36700455 . - . Parent=GSCOCT00015989001 | |
| 27237 chr1 manual_curation exon 36699952 36700029 . - . Parent=GSCOCT00015989001 | |
| 27238 chr1 manual_curation exon 36699158 36699334 . - . Parent=GSCOCT00015989001 | |
| 27239 chr1 manual_curation exon 36698911 36698988 . - . Parent=GSCOCT00015989001 | |
| 27240 chr1 manual_curation exon 36698238 36698413 . - . Parent=GSCOCT00015989001 | |
| 27241 chr1 manual_curation exon 36697024 36697182 . - . Parent=GSCOCT00015989001 | |
| 27242 chr1 manual_curation exon 36696837 36696897 . - . Parent=GSCOCT00015989001 | |
| 27243 chr1 manual_curation exon 36695789 36696400 . - . Parent=GSCOCT00015989001 | |
| 27244 chr1 manual_curation CDS 36700849 36701277 . - 0 Parent=GSCOCT00015989001 | |
| 27245 chr1 manual_curation CDS 36700336 36700455 . - 0 Parent=GSCOCT00015989001 | |
| 27246 chr1 manual_curation CDS 36699952 36700029 . - 0 Parent=GSCOCT00015989001 | |
| 27247 chr1 manual_curation CDS 36699158 36699334 . - 0 Parent=GSCOCT00015989001 | |
| 27248 chr1 manual_curation CDS 36698911 36698988 . - 0 Parent=GSCOCT00015989001 | |
| 27249 chr1 manual_curation CDS 36698238 36698413 . - 0 Parent=GSCOCT00015989001 | |
| 27250 chr1 manual_curation CDS 36697024 36697182 . - 2 Parent=GSCOCT00015989001 | |
| 27251 chr1 manual_curation CDS 36696837 36696897 . - 2 Parent=GSCOCT00015989001 | |
| 27252 chr1 manual_curation CDS 36696212 36696400 . - 0 Parent=GSCOCT00015989001 | |
| 27253 chr1 manual_curation gene 36705259 36707824 . + . ID=GSCOCG00015988001;Name=Cc01_g19990 | |
| 27254 chr1 manual_curation mRNA 36705259 36707824 . + . ID=GSCOCT00015988001;Parent=GSCOCG00015988001;Name=Cc01_g19990 | |
| 27255 chr1 manual_curation polypeptide 36705396 36707578 . + . ID=GSCOCP00015988001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:O49343,SwissProt:Q9FKC3,SwissProt:Q9ZU88,TAIR:AT2G30780.1,TAIR:AT2G48000.1,TAIR:AT5G48730.1,TIGRFAMs:TIGR00756,TrEMBL:B9SFK0,TrEMBL:D7TP76,TrEMBL:I1N9D0;Derives_from=GSCOCT00015988001;Name=Cc01_g19990;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At2g30780,CC_functional_completeness:complete,CC_gene:At2g30780,CC_gene:At2g48000,CC_gene:At5g48730;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015988001~ Pentatricopeptide repeat-containing protein At2g30780~ At2g30780~ complete;original_location=complement(join(545352..545795%2C543613..544737));owner=coffea | |
| 27256 chr1 manual_curation exon 36706454 36707824 . + . Parent=GSCOCT00015988001 | |
| 27257 chr1 manual_curation exon 36705259 36705839 . + . Parent=GSCOCT00015988001 | |
| 27258 chr1 manual_curation CDS 36706454 36707578 . + 0 Parent=GSCOCT00015988001 | |
| 27259 chr1 manual_curation CDS 36705396 36705839 . + 0 Parent=GSCOCT00015988001 | |
| 27260 chr1 manual_curation gene 36713472 36716809 . - . ID=GSCOCG00015985001;Name=Cc01_g20000 | |
| 27261 chr1 manual_curation mRNA 36713472 36716809 . - . ID=GSCOCT00015985001;Parent=GSCOCG00015985001;Name=Cc01_g20000 | |
| 27262 chr1 manual_curation polypeptide 36714508 36716088 . - . ID=GSCOCP00015985001;Dbxref=InterPro:IPR002168,InterPro:IPR013094,PFAM:PF07859,PROSITE:PS01173,SwissProt:Q940G6,SwissProt:Q9LYC1,SwissProt:Q9MAA7,TAIR:AT3G05120.1,TAIR:AT3G63010.1,TAIR:AT5G27320.1,TrEMBL:B9GTB2,TrEMBL:B9SFJ8,TrEMBL:F6HQ36;Derives_from=GSCOCT00015985001;Name=Cc01_g20000;Ontology_term=CC_evidence_code:ISS,GO:0008152,GO:0016787,CC_EC_number:missing_EC_number,PRODUCT:Gibberellin receptor GID1B,CC_functional_completeness:complete,CC_gene:GID1B,CC_gene:GID1C,CC_gene:GID1A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015985001~ Gibberellin receptor GID1B~ GID1B~ complete;original_location=join(535103..535141%2C535688..536683);owner=coffea | |
| 27263 chr1 manual_curation exon 36716050 36716809 . - . Parent=GSCOCT00015985001 | |
| 27264 chr1 manual_curation exon 36713472 36715503 . - . Parent=GSCOCT00015985001 | |
| 27265 chr1 manual_curation CDS 36716050 36716088 . - 0 Parent=GSCOCT00015985001 | |
| 27266 chr1 manual_curation CDS 36714508 36715503 . - 0 Parent=GSCOCT00015985001 | |
| 27267 chr1 manual_curation gene 36734112 36735500 . + . ID=GSCOCG00015984001;Name=Cc01_g20010 | |
| 27268 chr1 manual_curation mRNA 36734112 36735500 . + . ID=GSCOCT00015984001;Parent=GSCOCG00015984001;Name=Cc01_g20010 | |
| 27269 chr1 manual_curation polypeptide 36734112 36735500 . + . ID=GSCOCP00015984001;Dbxref=GENE3D:G3DSA:1.25.40.20,InterPro:IPR000535,InterPro:IPR002110,InterPro:IPR020683,PFAM:PF00023,PROFILE:PS50088,PROFILE:PS50202,PROFILE:PS50297,SMART:SM00248,SUPERFAMILY:SSF48403,SwissProt:P16157,SwissProt:Q01484,SwissProt:Q12955,TAIR:AT1G07710.1,TAIR:AT2G31820.1,TAIR:AT5G02620.1,TrEMBL:A5C1C3,TrEMBL:B9GTB5,TrEMBL:F6HQ35;Derives_from=GSCOCT00015984001;Name=Cc01_g20010;Ontology_term=CC_evidence_code:ISS,GO:0005198,CC_EC_number:3.1.1.4,PRODUCT:Putative Ankyrin-3,CC_functional_completeness:fragment,CC_gene:ANK3,CC_gene:ANK2,CC_gene:ANK1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015984001~ Putative Ankyrin-3~ ANK3~ fragment;original_location=complement(515691..517079);owner=coffea | |
| 27270 chr1 manual_curation exon 36734112 36735500 . + . Parent=GSCOCT00015984001 | |
| 27271 chr1 manual_curation CDS 36734112 36735500 . + 0 Parent=GSCOCT00015984001 | |
| 27272 chr1 manual_curation gene 36736280 36737228 . + . ID=GSCOCG00015983001;Name=Cc01_g20020 | |
| 27273 chr1 manual_curation mRNA 36736280 36737228 . + . ID=GSCOCT00015983001;Parent=GSCOCG00015983001;Name=Cc01_g20020 | |
| 27274 chr1 manual_curation polypeptide 36736365 36736891 . + . ID=GSCOCP00015983001;Dbxref=GENE3D:G3DSA:1.10.20.10,InterPro:IPR002119,InterPro:IPR007125,InterPro:IPR009072,PANTHER:PTHR23430,PFAM:PF00125,PRINTS:PR00620,PROSITE:PS00046,SMART:SM00414,SUPERFAMILY:SSF47113,SwissProt:O04848,SwissProt:O65759,SwissProt:P35063,TAIR:AT1G08880.1,TAIR:AT1G54690.1,TAIR:AT3G20670.1,TrEMBL:B9S3Z3,TrEMBL:C6TFW1,TrEMBL:I1N9C6;Derives_from=GSCOCT00015983001;Name=Cc01_g20020;Ontology_term=CC_evidence_code:ISS,GO:0000786,GO:0003677,GO:0005634,GO:0006334,CC_EC_number:missing_EC_number,PRODUCT:Histone H2AX,CC_functional_completeness:complete,CC_gene:HIS2A,CC_gene:At1g08880;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015983001~ Histone H2AX~ HIS2A~ complete;original_location=complement(join(514617..514826%2C514300..514521));owner=coffea | |
| 27275 chr1 manual_curation exon 36736670 36737228 . + . Parent=GSCOCT00015983001 | |
| 27276 chr1 manual_curation exon 36736280 36736574 . + . Parent=GSCOCT00015983001 | |
| 27277 chr1 manual_curation CDS 36736670 36736891 . + 0 Parent=GSCOCT00015983001 | |
| 27278 chr1 manual_curation CDS 36736365 36736574 . + 0 Parent=GSCOCT00015983001 | |
| 27279 chr1 manual_curation gene 36738573 36739588 . + . ID=GSCOCG00015982001;Name=Cc01_g20030 | |
| 27280 chr1 manual_curation mRNA 36738573 36739588 . + . ID=GSCOCT00015982001;Parent=GSCOCG00015982001;Name=Cc01_g20030 | |
| 27281 chr1 manual_curation polypeptide 36738666 36739272 . + . ID=GSCOCP00015982001;Dbxref=GENE3D:G3DSA:1.10.20.10,InterPro:IPR002119,InterPro:IPR007125,InterPro:IPR009072,PANTHER:PTHR23430,PFAM:PF00125,PRINTS:PR00620,PROSITE:PS00046,SMART:SM00414,SUPERFAMILY:SSF47113,SwissProt:O04848,SwissProt:O65759,SwissProt:Q9S9K7,TAIR:AT1G08880.1,TAIR:AT1G54690.1,TAIR:AT4G27230.1,TrEMBL:A5BCX3,TrEMBL:B9REZ0,TrEMBL:C6SV65;Derives_from=GSCOCT00015982001;Name=Cc01_g20030;Ontology_term=CC_evidence_code:ISS,GO:0000786,GO:0003677,GO:0005634,GO:0006334,CC_EC_number:missing_EC_number,PRODUCT:Histone H2AX,CC_functional_completeness:complete,CC_gene:HIS2A,CC_gene:At1g54690,CC_gene:At1g08880;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015982001~ Histone H2AX~ HIS2A~ complete;original_location=complement(join(512325..512525%2C511919..512140));owner=coffea | |
| 27282 chr1 manual_curation exon 36739051 36739588 . + . Parent=GSCOCT00015982001 | |
| 27283 chr1 manual_curation exon 36738573 36738866 . + . Parent=GSCOCT00015982001 | |
| 27284 chr1 manual_curation CDS 36739051 36739272 . + 0 Parent=GSCOCT00015982001 | |
| 27285 chr1 manual_curation CDS 36738666 36738866 . + 0 Parent=GSCOCT00015982001 | |
| 27286 chr1 manual_curation gene 36741122 36744493 . + . ID=GSCOCG00015981001;Name=Cc01_g20040 | |
| 27287 chr1 manual_curation mRNA 36741122 36744493 . + . ID=GSCOCT00015981001;Parent=GSCOCG00015981001;Name=Cc01_g20040 | |
| 27288 chr1 manual_curation polypeptide 36741122 36744236 . + . ID=GSCOCP00015981001;Dbxref=GENE3D:G3DSA:3.20.20.100,InterPro:IPR001395,PANTHER:PTHR11732,PFAM:PF00248,SUPERFAMILY:SSF51430,SwissProt:P0A9T4,SwissProt:P0A9T5,SwissProt:P40690,TAIR:AT1G04420.1,TAIR:AT1G04690.1,TAIR:AT1G06690.1,TrEMBL:B9IE88,TrEMBL:G7L822,TrEMBL:I1K464;Derives_from=GSCOCT00015981001;Name=Cc01_g20040;Ontology_term=CC_evidence_code:ISS,GO:0016491,GO:0055114,CC_EC_number:1.1.1.274,PRODUCT:Putative Protein tas,CC_functional_completeness:fragment,CC_gene:tas;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015981001~ Putative Protein tas~ tas~ fragment;original_location=complement(join(510040..510069%2C509581..509653%2C509371..509470%2C509139..509247%2C508251..508339%2C507941..507997%2C507602..507710%2C507408..507509%2C506955..507104));owner=coffea | |
| 27289 chr1 manual_curation exon 36744087 36744493 . + . Parent=GSCOCT00015981001 | |
| 27290 chr1 manual_curation exon 36743682 36743783 . + . Parent=GSCOCT00015981001 | |
| 27291 chr1 manual_curation exon 36743481 36743589 . + . Parent=GSCOCT00015981001 | |
| 27292 chr1 manual_curation exon 36743194 36743250 . + . Parent=GSCOCT00015981001 | |
| 27293 chr1 manual_curation exon 36742852 36742940 . + . Parent=GSCOCT00015981001 | |
| 27294 chr1 manual_curation exon 36741944 36742052 . + . Parent=GSCOCT00015981001 | |
| 27295 chr1 manual_curation exon 36741721 36741820 . + . Parent=GSCOCT00015981001 | |
| 27296 chr1 manual_curation exon 36741538 36741610 . + . Parent=GSCOCT00015981001 | |
| 27297 chr1 manual_curation exon 36741122 36741151 . + . Parent=GSCOCT00015981001 | |
| 27298 chr1 manual_curation CDS 36744087 36744236 . + 0 Parent=GSCOCT00015981001 | |
| 27299 chr1 manual_curation CDS 36743682 36743783 . + 0 Parent=GSCOCT00015981001 | |
| 27300 chr1 manual_curation CDS 36743481 36743589 . + 2 Parent=GSCOCT00015981001 | |
| 27301 chr1 manual_curation CDS 36743194 36743250 . + 2 Parent=GSCOCT00015981001 | |
| 27302 chr1 manual_curation CDS 36742852 36742940 . + 0 Parent=GSCOCT00015981001 | |
| 27303 chr1 manual_curation CDS 36741944 36742052 . + 2 Parent=GSCOCT00015981001 | |
| 27304 chr1 manual_curation CDS 36741721 36741820 . + 1 Parent=GSCOCT00015981001 | |
| 27305 chr1 manual_curation CDS 36741538 36741610 . + 0 Parent=GSCOCT00015981001 | |
| 27306 chr1 manual_curation CDS 36741122 36741151 . + 0 Parent=GSCOCT00015981001 | |
| 27307 chr1 manual_curation gene 36744704 36746940 . + . ID=GSCOCG00015980001;Name=Cc01_g20050 | |
| 27308 chr1 manual_curation mRNA 36744704 36746940 . + . ID=GSCOCT00015980001;Parent=GSCOCG00015980001;Name=Cc01_g20050 | |
| 27309 chr1 manual_curation polypeptide 36744971 36746536 . + . ID=GSCOCP00015980001;Dbxref=GENE3D:G3DSA:3.20.20.100,InterPro:IPR001395,PANTHER:PTHR11732,PFAM:PF00248,SUPERFAMILY:SSF51430,SwissProt:P0A9T4,SwissProt:P0A9T5,TAIR:AT1G04420.1,TrEMBL:B9IE88,TrEMBL:I1K464,TrEMBL:I1KSL2;Derives_from=GSCOCT00015980001;Name=Cc01_g20050;Ontology_term=CC_evidence_code:ISS,GO:0016491,GO:0055114,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein tas,CC_functional_completeness:fragment,CC_gene:tas;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015980001~ Putative Protein tas~ tas~ fragment;original_location=complement(join(506064..506220%2C505909..505973%2C505535..505589%2C504655..504815));owner=coffea | |
| 27310 chr1 manual_curation exon 36746376 36746940 . + . Parent=GSCOCT00015980001 | |
| 27311 chr1 manual_curation exon 36745602 36745656 . + . Parent=GSCOCT00015980001 | |
| 27312 chr1 manual_curation exon 36745218 36745282 . + . Parent=GSCOCT00015980001 | |
| 27313 chr1 manual_curation exon 36744704 36745127 . + . Parent=GSCOCT00015980001 | |
| 27314 chr1 manual_curation CDS 36746376 36746536 . + 1 Parent=GSCOCT00015980001 | |
| 27315 chr1 manual_curation CDS 36745602 36745656 . + 0 Parent=GSCOCT00015980001 | |
| 27316 chr1 manual_curation CDS 36745218 36745282 . + 1 Parent=GSCOCT00015980001 | |
| 27317 chr1 manual_curation CDS 36744971 36745127 . + 0 Parent=GSCOCT00015980001 | |
| 27318 chr1 manual_curation gene 36749136 36757308 . + . ID=GSCOCG00015978001;Name=Cc01_g20060 | |
| 27319 chr1 manual_curation mRNA 36749136 36757308 . + . ID=GSCOCT00015978001;Parent=GSCOCG00015978001;Name=Cc01_g20060 | |
| 27320 chr1 manual_curation polypeptide 36749136 36756825 . + . ID=GSCOCP00015978001;Dbxref=GENE3D:G3DSA:2.120.10.80,InterPro:IPR004843,InterPro:IPR006186,InterPro:IPR011043,InterPro:IPR012391,InterPro:IPR015915,PANTHER:PTHR11668,PFAM:PF00149,PIR:PIRSF036363,PRINTS:PR00114,PROSITE:PS00125,SMART:SM00156,SUPERFAMILY:SSF50965,SwissProt:Q60EX6,SwissProt:Q8L7U5,SwissProt:Q9SHS7,TAIR:AT1G08420.1,TAIR:AT2G27210.1,TAIR:AT4G03080.1,TrEMBL:D7TP64,TrEMBL:G1FTR6,TrEMBL:I1JFE9;Derives_from=GSCOCT00015978001;Name=Cc01_g20060;Ontology_term=CC_evidence_code:ISS,GO:0004721,GO:0005506,GO:0016787,GO:0030145,CC_EC_number:3.1.3.16,CC_EC_number:3.1.3.16,PRODUCT:Serine/threonine-protein phosphatase BSL1,CC_functional_completeness:complete,CC_gene:BSL1,CC_gene:BSL3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015978001~ Serine/threonine-protein phosphatase BSL1~ BSL1~ complete;original_location=complement(join(501854..502055%2C501691..501751%2C501491..501569%2C501313..501392%2C501113..501207%2C500362..500461%2C499363..499432%2C498921..499022%2C498327..498408%2C498055..498225%2C497242..497419%2C496952..497150%2C496707..496874%2C496367..496605%2C496193..496258%2C495990..496113%2C495636..495835%2C495495..495570%2C494820..494955%2C494594..494733%2C494366..494449));owner=coffea | |
| 27321 chr1 manual_curation exon 36756742 36757308 . + . Parent=GSCOCT00015978001 | |
| 27322 chr1 manual_curation exon 36756458 36756597 . + . Parent=GSCOCT00015978001 | |
| 27323 chr1 manual_curation exon 36756236 36756371 . + . Parent=GSCOCT00015978001 | |
| 27324 chr1 manual_curation exon 36755621 36755696 . + . Parent=GSCOCT00015978001 | |
| 27325 chr1 manual_curation exon 36755356 36755555 . + . Parent=GSCOCT00015978001 | |
| 27326 chr1 manual_curation exon 36755078 36755201 . + . Parent=GSCOCT00015978001 | |
| 27327 chr1 manual_curation exon 36754933 36754998 . + . Parent=GSCOCT00015978001 | |
| 27328 chr1 manual_curation exon 36754586 36754824 . + . Parent=GSCOCT00015978001 | |
| 27329 chr1 manual_curation exon 36754317 36754484 . + . Parent=GSCOCT00015978001 | |
| 27330 chr1 manual_curation exon 36754041 36754239 . + . Parent=GSCOCT00015978001 | |
| 27331 chr1 manual_curation exon 36753772 36753949 . + . Parent=GSCOCT00015978001 | |
| 27332 chr1 manual_curation exon 36752966 36753136 . + . Parent=GSCOCT00015978001 | |
| 27333 chr1 manual_curation exon 36752783 36752864 . + . Parent=GSCOCT00015978001 | |
| 27334 chr1 manual_curation exon 36752169 36752270 . + . Parent=GSCOCT00015978001 | |
| 27335 chr1 manual_curation exon 36751759 36751828 . + . Parent=GSCOCT00015978001 | |
| 27336 chr1 manual_curation exon 36750730 36750829 . + . Parent=GSCOCT00015978001 | |
| 27337 chr1 manual_curation exon 36749984 36750078 . + . Parent=GSCOCT00015978001 | |
| 27338 chr1 manual_curation exon 36749799 36749878 . + . Parent=GSCOCT00015978001 | |
| 27339 chr1 manual_curation exon 36749622 36749700 . + . Parent=GSCOCT00015978001 | |
| 27340 chr1 manual_curation exon 36749440 36749500 . + . Parent=GSCOCT00015978001 | |
| 27341 chr1 manual_curation exon 36749136 36749337 . + . Parent=GSCOCT00015978001 | |
| 27342 chr1 manual_curation CDS 36756742 36756825 . + 0 Parent=GSCOCT00015978001 | |
| 27343 chr1 manual_curation CDS 36756458 36756597 . + 1 Parent=GSCOCT00015978001 | |
| 27344 chr1 manual_curation CDS 36756236 36756371 . + 0 Parent=GSCOCT00015978001 | |
| 27345 chr1 manual_curation CDS 36755621 36755696 . + 2 Parent=GSCOCT00015978001 | |
| 27346 chr1 manual_curation CDS 36755356 36755555 . + 0 Parent=GSCOCT00015978001 | |
| 27347 chr1 manual_curation CDS 36755078 36755201 . + 2 Parent=GSCOCT00015978001 | |
| 27348 chr1 manual_curation CDS 36754933 36754998 . + 2 Parent=GSCOCT00015978001 | |
| 27349 chr1 manual_curation CDS 36754586 36754824 . + 0 Parent=GSCOCT00015978001 | |
| 27350 chr1 manual_curation CDS 36754317 36754484 . + 0 Parent=GSCOCT00015978001 | |
| 27351 chr1 manual_curation CDS 36754041 36754239 . + 2 Parent=GSCOCT00015978001 | |
| 27352 chr1 manual_curation CDS 36753772 36753949 . + 1 Parent=GSCOCT00015978001 | |
| 27353 chr1 manual_curation CDS 36752966 36753136 . + 1 Parent=GSCOCT00015978001 | |
| 27354 chr1 manual_curation CDS 36752783 36752864 . + 0 Parent=GSCOCT00015978001 | |
| 27355 chr1 manual_curation CDS 36752169 36752270 . + 0 Parent=GSCOCT00015978001 | |
| 27356 chr1 manual_curation CDS 36751759 36751828 . + 2 Parent=GSCOCT00015978001 | |
| 27357 chr1 manual_curation CDS 36750730 36750829 . + 1 Parent=GSCOCT00015978001 | |
| 27358 chr1 manual_curation CDS 36749984 36750078 . + 2 Parent=GSCOCT00015978001 | |
| 27359 chr1 manual_curation CDS 36749799 36749878 . + 0 Parent=GSCOCT00015978001 | |
| 27360 chr1 manual_curation CDS 36749622 36749700 . + 2 Parent=GSCOCT00015978001 | |
| 27361 chr1 manual_curation CDS 36749440 36749500 . + 1 Parent=GSCOCT00015978001 | |
| 27362 chr1 manual_curation CDS 36749136 36749337 . + 0 Parent=GSCOCT00015978001 | |
| 27363 chr1 manual_curation gene 36757769 36759048 . - . ID=GSCOCG00015977001;Name=Cc01_g20070 | |
| 27364 chr1 manual_curation mRNA 36757769 36759048 . - . ID=GSCOCT00015977001;Parent=GSCOCG00015977001;Name=Cc01_g20070 | |
| 27365 chr1 manual_curation polypeptide 36757990 36758418 . - . ID=GSCOCP00015977001;Dbxref=GENE3D:G3DSA:2.40.50.140,InterPro:IPR012340,InterPro:IPR016027,SUPERFAMILY:SSF50249,SwissProt:A6QLK2,SwissProt:Q3SWT1,SwissProt:Q54X41,TAIR:AT5G63690.1,TrEMBL:A5BEN8,TrEMBL:B9S3Z0,TrEMBL:F6HQ33;Derives_from=GSCOCT00015977001;Name=Cc01_g20070;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative SOSS complex subunit B1,CC_functional_completeness:fragment,CC_gene:DDB_G0279223,CC_gene:Obfc2b,CC_gene:OBFC2B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015977001~ Putative SOSS complex subunit B1~ DDB_G0279223~ fragment;original_location=492773..493201;owner=coffea | |
| 27366 chr1 manual_curation exon 36757769 36759048 . - . Parent=GSCOCT00015977001 | |
| 27367 chr1 manual_curation CDS 36757990 36758418 . - 0 Parent=GSCOCT00015977001 | |
| 27368 chr1 manual_curation gene 36759415 36771931 . - . ID=GSCOCG00015976001;Name=Cc01_g20080 | |
| 27369 chr1 manual_curation mRNA 36759415 36771931 . - . ID=GSCOCT00015976001;Parent=GSCOCG00015976001;Name=Cc01_g20080 | |
| 27370 chr1 manual_curation polypeptide 36760489 36771101 . - . ID=GSCOCP00015976001;Dbxref=InterPro:IPR001356,PROFILE:PS50071,SMART:SM00389,TAIR:AT4G03090.1,TrEMBL:A5BEN7,TrEMBL:B9S3Y9,TrEMBL:F6HQ32;Derives_from=GSCOCT00015976001;Name=Cc01_g20080;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0043565,CC_EC_number:missing_EC_number,PRODUCT:Putative sequence-specific DNA binding%3Bsequence-specific DNA binding transcription factors,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015976001~ Putative sequence-specific DNA binding%3Bsequence-specific DNA binding transcription factors~ unknown_gene~ complete;original_location=join(480090..480167%2C481753..481878%2C482013..482171%2C483095..483178%2C483259..483387%2C483558..483770%2C484312..484443%2C484567..484662%2C485929..486090%2C486350..486641%2C486740..486862%2C486942..487011%2C487463..487526%2C488634..489137%2C489230..489264%2C490168..490328%2C490392..490702);owner=coffea | |
| 27371 chr1 manual_curation exon 36771766 36771931 . - . Parent=GSCOCT00015976001 | |
| 27372 chr1 manual_curation exon 36771024 36771114 . - . Parent=GSCOCT00015976001 | |
| 27373 chr1 manual_curation exon 36769313 36769438 . - . Parent=GSCOCT00015976001 | |
| 27374 chr1 manual_curation exon 36769020 36769178 . - . Parent=GSCOCT00015976001 | |
| 27375 chr1 manual_curation exon 36768013 36768096 . - . Parent=GSCOCT00015976001 | |
| 27376 chr1 manual_curation exon 36767804 36767932 . - . Parent=GSCOCT00015976001 | |
| 27377 chr1 manual_curation exon 36767421 36767633 . - . Parent=GSCOCT00015976001 | |
| 27378 chr1 manual_curation exon 36766748 36766879 . - . Parent=GSCOCT00015976001 | |
| 27379 chr1 manual_curation exon 36766529 36766624 . - . Parent=GSCOCT00015976001 | |
| 27380 chr1 manual_curation exon 36765101 36765262 . - . Parent=GSCOCT00015976001 | |
| 27381 chr1 manual_curation exon 36764550 36764841 . - . Parent=GSCOCT00015976001 | |
| 27382 chr1 manual_curation exon 36764329 36764451 . - . Parent=GSCOCT00015976001 | |
| 27383 chr1 manual_curation exon 36764180 36764249 . - . Parent=GSCOCT00015976001 | |
| 27384 chr1 manual_curation exon 36763665 36763728 . - . Parent=GSCOCT00015976001 | |
| 27385 chr1 manual_curation exon 36762054 36762557 . - . Parent=GSCOCT00015976001 | |
| 27386 chr1 manual_curation exon 36761927 36761961 . - . Parent=GSCOCT00015976001 | |
| 27387 chr1 manual_curation exon 36760863 36761023 . - . Parent=GSCOCT00015976001 | |
| 27388 chr1 manual_curation exon 36759415 36760799 . - . Parent=GSCOCT00015976001 | |
| 27389 chr1 manual_curation CDS 36771024 36771101 . - 0 Parent=GSCOCT00015976001 | |
| 27390 chr1 manual_curation CDS 36769313 36769438 . - 0 Parent=GSCOCT00015976001 | |
| 27391 chr1 manual_curation CDS 36769020 36769178 . - 0 Parent=GSCOCT00015976001 | |
| 27392 chr1 manual_curation CDS 36768013 36768096 . - 0 Parent=GSCOCT00015976001 | |
| 27393 chr1 manual_curation CDS 36767804 36767932 . - 0 Parent=GSCOCT00015976001 | |
| 27394 chr1 manual_curation CDS 36767421 36767633 . - 0 Parent=GSCOCT00015976001 | |
| 27395 chr1 manual_curation CDS 36766748 36766879 . - 0 Parent=GSCOCT00015976001 | |
| 27396 chr1 manual_curation CDS 36766529 36766624 . - 0 Parent=GSCOCT00015976001 | |
| 27397 chr1 manual_curation CDS 36765101 36765262 . - 0 Parent=GSCOCT00015976001 | |
| 27398 chr1 manual_curation CDS 36764550 36764841 . - 0 Parent=GSCOCT00015976001 | |
| 27399 chr1 manual_curation CDS 36764329 36764451 . - 1 Parent=GSCOCT00015976001 | |
| 27400 chr1 manual_curation CDS 36764180 36764249 . - 1 Parent=GSCOCT00015976001 | |
| 27401 chr1 manual_curation CDS 36763665 36763728 . - 2 Parent=GSCOCT00015976001 | |
| 27402 chr1 manual_curation CDS 36762054 36762557 . - 0 Parent=GSCOCT00015976001 | |
| 27403 chr1 manual_curation CDS 36761927 36761961 . - 0 Parent=GSCOCT00015976001 | |
| 27404 chr1 manual_curation CDS 36760863 36761023 . - 2 Parent=GSCOCT00015976001 | |
| 27405 chr1 manual_curation CDS 36760489 36760799 . - 1 Parent=GSCOCT00015976001 | |
| 27406 chr1 manual_curation gene 36787044 36788669 . + . ID=GSCOCG00015975001;Name=Cc01_g20090 | |
| 27407 chr1 manual_curation mRNA 36787044 36788669 . + . ID=GSCOCT00015975001;Parent=GSCOCG00015975001;Name=Cc01_g20090 | |
| 27408 chr1 manual_curation polypeptide 36787044 36788669 . + . ID=GSCOCP00015975001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR018983,InterPro:IPR019781,InterPro:IPR019782,InterPro:IPR020472,PFAM:PF00400,PFAM:PF09384,PRINTS:PR00320,PROFILE:PS50082,PROFILE:PS50294,SMART:SM00320,SUPERFAMILY:SSF50978,SwissProt:A7MB12,SwissProt:Q5F3D7,SwissProt:Q8TED0,TAIR:AT2G47990.1,TAIR:AT3G15980.5,TAIR:AT3G49660.1,TrEMBL:A5BEN6,TrEMBL:B9GTB8,TrEMBL:F6HQ31;Derives_from=GSCOCT00015975001;Name=Cc01_g20090;Ontology_term=CC_evidence_code:ISS,GO:0005730,GO:0006364,CC_EC_number:2.7.11.7,PRODUCT:Putative U3 small nucleolar RNA-associated protein 15 homolog,CC_functional_completeness:complete,CC_gene:UTP15;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015975001~ Putative U3 small nucleolar RNA-associated protein 15 homolog~ UTP15~ complete;original_location=complement(462522..464147);owner=coffea | |
| 27409 chr1 manual_curation exon 36787044 36788669 . + . Parent=GSCOCT00015975001 | |
| 27410 chr1 manual_curation CDS 36787044 36788669 . + 0 Parent=GSCOCT00015975001 | |
| 27411 chr1 manual_curation gene 36793680 36805395 . - . ID=GSCOCG00015973001;Name=Cc01_g20100 | |
| 27412 chr1 manual_curation mRNA 36793680 36805395 . - . ID=GSCOCT00015973001;Parent=GSCOCG00015973001;Name=Cc01_g20100 | |
| 27413 chr1 manual_curation polypeptide 36794070 36804965 . - . ID=GSCOCP00015973001;Dbxref=InterPro:IPR013721,InterPro:IPR016024,InterPro:IPR020839,PFAM:PF08514,PROFILE:PS51425,SUPERFAMILY:SSF48371,SwissProt:Q8N3U4,SwissProt:Q8WVM7,SwissProt:Q9D3E6,TAIR:AT2G47980.1,TrEMBL:A5BEN5,TrEMBL:B9S3Y7,TrEMBL:D7TP60;Derives_from=GSCOCT00015973001;Name=Cc01_g20100;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:Putative Cohesin subunit SA-1,CC_functional_completeness:complete,CC_gene:STAG1,CC_gene:Stag1,CC_gene:STAG2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015973001~ Putative Cohesin subunit SA-1~ STAG1~ complete;original_location=join(446226..446270%2C446376..446601%2C447379..447491%2C447596..447688%2C447856..448016%2C448101..448337%2C449141..449285%2C449389..449567%2C449722..449861%2C449936..450078%2C451002..451175%2C452012..452173%2C452260..452460%2C452539..452676%2C452945..453145%2C453273..453417%2C453913..454019%2C454195..454332%2C455600..455865%2C455958..456082%2C456429..456737%2C457108..457121);owner=coffea | |
| 27414 chr1 manual_curation exon 36804921 36805395 . - . Parent=GSCOCT00015973001 | |
| 27415 chr1 manual_curation exon 36804590 36804815 . - . Parent=GSCOCT00015973001 | |
| 27416 chr1 manual_curation exon 36803700 36803812 . - . Parent=GSCOCT00015973001 | |
| 27417 chr1 manual_curation exon 36803503 36803595 . - . Parent=GSCOCT00015973001 | |
| 27418 chr1 manual_curation exon 36803175 36803335 . - . Parent=GSCOCT00015973001 | |
| 27419 chr1 manual_curation exon 36802854 36803090 . - . Parent=GSCOCT00015973001 | |
| 27420 chr1 manual_curation exon 36801906 36802050 . - . Parent=GSCOCT00015973001 | |
| 27421 chr1 manual_curation exon 36801624 36801802 . - . Parent=GSCOCT00015973001 | |
| 27422 chr1 manual_curation exon 36801330 36801469 . - . Parent=GSCOCT00015973001 | |
| 27423 chr1 manual_curation exon 36801113 36801255 . - . Parent=GSCOCT00015973001 | |
| 27424 chr1 manual_curation exon 36800016 36800189 . - . Parent=GSCOCT00015973001 | |
| 27425 chr1 manual_curation exon 36799018 36799179 . - . Parent=GSCOCT00015973001 | |
| 27426 chr1 manual_curation exon 36798731 36798931 . - . Parent=GSCOCT00015973001 | |
| 27427 chr1 manual_curation exon 36798515 36798652 . - . Parent=GSCOCT00015973001 | |
| 27428 chr1 manual_curation exon 36798046 36798246 . - . Parent=GSCOCT00015973001 | |
| 27429 chr1 manual_curation exon 36797774 36797918 . - . Parent=GSCOCT00015973001 | |
| 27430 chr1 manual_curation exon 36797172 36797278 . - . Parent=GSCOCT00015973001 | |
| 27431 chr1 manual_curation exon 36796859 36796996 . - . Parent=GSCOCT00015973001 | |
| 27432 chr1 manual_curation exon 36795326 36795591 . - . Parent=GSCOCT00015973001 | |
| 27433 chr1 manual_curation exon 36795109 36795233 . - . Parent=GSCOCT00015973001 | |
| 27434 chr1 manual_curation exon 36794454 36794762 . - . Parent=GSCOCT00015973001 | |
| 27435 chr1 manual_curation exon 36793680 36794083 . - . Parent=GSCOCT00015973001 | |
| 27436 chr1 manual_curation CDS 36804921 36804965 . - 0 Parent=GSCOCT00015973001 | |
| 27437 chr1 manual_curation CDS 36804590 36804815 . - 0 Parent=GSCOCT00015973001 | |
| 27438 chr1 manual_curation CDS 36803700 36803812 . - 1 Parent=GSCOCT00015973001 | |
| 27439 chr1 manual_curation CDS 36803503 36803595 . - 0 Parent=GSCOCT00015973001 | |
| 27440 chr1 manual_curation CDS 36803175 36803335 . - 0 Parent=GSCOCT00015973001 | |
| 27441 chr1 manual_curation CDS 36802854 36803090 . - 2 Parent=GSCOCT00015973001 | |
| 27442 chr1 manual_curation CDS 36801906 36802050 . - 2 Parent=GSCOCT00015973001 | |
| 27443 chr1 manual_curation CDS 36801624 36801802 . - 0 Parent=GSCOCT00015973001 | |
| 27444 chr1 manual_curation CDS 36801330 36801469 . - 2 Parent=GSCOCT00015973001 | |
| 27445 chr1 manual_curation CDS 36801113 36801255 . - 1 Parent=GSCOCT00015973001 | |
| 27446 chr1 manual_curation CDS 36800016 36800189 . - 0 Parent=GSCOCT00015973001 | |
| 27447 chr1 manual_curation CDS 36799018 36799179 . - 0 Parent=GSCOCT00015973001 | |
| 27448 chr1 manual_curation CDS 36798731 36798931 . - 0 Parent=GSCOCT00015973001 | |
| 27449 chr1 manual_curation CDS 36798515 36798652 . - 0 Parent=GSCOCT00015973001 | |
| 27450 chr1 manual_curation CDS 36798046 36798246 . - 0 Parent=GSCOCT00015973001 | |
| 27451 chr1 manual_curation CDS 36797774 36797918 . - 0 Parent=GSCOCT00015973001 | |
| 27452 chr1 manual_curation CDS 36797172 36797278 . - 1 Parent=GSCOCT00015973001 | |
| 27453 chr1 manual_curation CDS 36796859 36796996 . - 0 Parent=GSCOCT00015973001 | |
| 27454 chr1 manual_curation CDS 36795326 36795591 . - 0 Parent=GSCOCT00015973001 | |
| 27455 chr1 manual_curation CDS 36795109 36795233 . - 2 Parent=GSCOCT00015973001 | |
| 27456 chr1 manual_curation CDS 36794454 36794762 . - 1 Parent=GSCOCT00015973001 | |
| 27457 chr1 manual_curation CDS 36794070 36794083 . - 1 Parent=GSCOCT00015973001 | |
| 27458 chr1 manual_curation gene 36805643 36809805 . - . ID=GSCOCG00015972001;Name=Cc01_g20110 | |
| 27459 chr1 manual_curation mRNA 36805643 36809805 . - . ID=GSCOCT00015972001;Parent=GSCOCG00015972001;Name=Cc01_g20110 | |
| 27460 chr1 manual_curation polypeptide 36806192 36809491 . - . ID=GSCOCP00015972001;Dbxref=InterPro:IPR007717,PFAM:PF05021,SwissProt:O82264,SwissProt:Q9AS33,SwissProt:Q9LYC2,TAIR:AT2G47970.1,TAIR:AT3G63000.1,TrEMBL:A9PCA9,TrEMBL:F6HQ30,TrEMBL:I1JQF4;Derives_from=GSCOCT00015972001;Name=Cc01_g20110;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:NPL4-like protein 2,CC_functional_completeness:complete,CC_gene:At2g47970,CC_gene:At3g63000,CC_gene:Os01g0377700;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015972001~ NPL4-like protein 2~ At2g47970~ complete;original_location=join(441700..442683%2C444745..444999);owner=coffea | |
| 27461 chr1 manual_curation exon 36808508 36809805 . - . Parent=GSCOCT00015972001 | |
| 27462 chr1 manual_curation exon 36805643 36806446 . - . Parent=GSCOCT00015972001 | |
| 27463 chr1 manual_curation CDS 36808508 36809491 . - 0 Parent=GSCOCT00015972001 | |
| 27464 chr1 manual_curation CDS 36806192 36806446 . - 0 Parent=GSCOCT00015972001 | |
| 27465 chr1 manual_curation gene 36813096 36817071 . + . ID=GSCOCG00015971001;Name=Cc01_g20120 | |
| 27466 chr1 manual_curation mRNA 36813096 36817071 . + . ID=GSCOCT00015971001;Parent=GSCOCG00015971001;Name=Cc01_g20120 | |
| 27467 chr1 manual_curation polypeptide 36813396 36815925 . + . ID=GSCOCP00015971001;Dbxref=GENE3D:G3DSA:1.10.555.10,InterPro:IPR000095,InterPro:IPR000198,InterPro:IPR008936,PFAM:PF00620,PFAM:PF00786,PROFILE:PS50108,PROFILE:PS50238,SMART:SM00285,SMART:SM00324,SUPERFAMILY:SSF48350,SwissProt:Q54Y72,SwissProt:Q5U2Z7,SwissProt:Q8C4V1,TAIR:AT2G46710.1,TAIR:AT4G03100.1,TAIR:AT5G22400.1,TrEMBL:B9S3Y4,TrEMBL:I1JFF1,TrEMBL:I1L7Z4;Derives_from=GSCOCT00015971001;Name=Cc01_g20120;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0007165,CC_EC_number:missing_EC_number,PRODUCT:Rho GTPase activating protein with PAK-box/P21-Rho-binding domain,CC_functional_completeness:modules,CC_gene:gacA,CC_gene:Arhgap24;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015971001~ Rho GTPase activating protein with PAK-box/P21-Rho-binding domain~ gacA~ modules;original_location=complement(join(437750..437795%2C437416..437701%2C436455..436575%2C435991..436341%2C435266..435883));owner=coffea | |
| 27468 chr1 manual_curation exon 36815308 36817071 . + . Parent=GSCOCT00015971001 | |
| 27469 chr1 manual_curation exon 36814850 36815200 . + . Parent=GSCOCT00015971001 | |
| 27470 chr1 manual_curation exon 36814616 36814736 . + . Parent=GSCOCT00015971001 | |
| 27471 chr1 manual_curation exon 36813490 36813775 . + . Parent=GSCOCT00015971001 | |
| 27472 chr1 manual_curation exon 36813096 36813441 . + . Parent=GSCOCT00015971001 | |
| 27473 chr1 manual_curation CDS 36815308 36815925 . + 0 Parent=GSCOCT00015971001 | |
| 27474 chr1 manual_curation CDS 36814850 36815200 . + 0 Parent=GSCOCT00015971001 | |
| 27475 chr1 manual_curation CDS 36814616 36814736 . + 2 Parent=GSCOCT00015971001 | |
| 27476 chr1 manual_curation CDS 36813490 36813775 . + 1 Parent=GSCOCT00015971001 | |
| 27477 chr1 manual_curation CDS 36813396 36813441 . + 0 Parent=GSCOCT00015971001 | |
| 27478 chr1 manual_curation gene 36817469 36818557 . - . ID=GSCOCG00015970001;Name=Cc01_g20130 | |
| 27479 chr1 manual_curation mRNA 36817469 36818557 . - . ID=GSCOCT00015970001;Parent=GSCOCG00015970001;Name=Cc01_g20130 | |
| 27480 chr1 manual_curation polypeptide 36817718 36818251 . - . ID=GSCOCP00015970001;Derives_from=GSCOCT00015970001;Name=Cc01_g20130;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015970001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=432940..433473;owner=coffea | |
| 27481 chr1 manual_curation exon 36817469 36818557 . - . Parent=GSCOCT00015970001 | |
| 27482 chr1 manual_curation CDS 36817718 36818251 . - 0 Parent=GSCOCT00015970001 | |
| 27483 chr1 manual_curation gene 36823828 36829788 . - . ID=GSCOCG00015968001;Name=Cc01_g20140 | |
| 27484 chr1 manual_curation mRNA 36823828 36829788 . - . ID=GSCOCT00015968001;Parent=GSCOCG00015968001;Name=Cc01_g20140 | |
| 27485 chr1 manual_curation polypeptide 36824120 36829484 . - . ID=GSCOCP00015968001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR002343,InterPro:IPR012677,InterPro:IPR015903,PANTHER:PTHR10432:SF35,PFAM:PF00076,PRINTS:PR00961,PROFILE:PS50102,SMART:SM00360,SwissProt:A0JM51,SwissProt:Q8N6W0,SwissProt:Q9IBD1,TAIR:AT1G03457.2,TAIR:AT4G03110.1,TAIR:AT4G16280.2,TrEMBL:B9I9Y4,TrEMBL:B9S3Y1,TrEMBL:D7TP53;Derives_from=GSCOCT00015968001;Name=Cc01_g20140;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,GO:0003723,CC_EC_number:missing_EC_number,PRODUCT:Putative CUGBP Elav-like family member 5,CC_functional_completeness:complete,CC_gene:celf5,CC_gene:celf3,CC_gene:CELF5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015968001~ Putative CUGBP Elav-like family member 5~ celf5~ complete;original_location=join(421707..421875%2C422076..422158%2C424465..424516%2C424703..424828%2C424934..425013%2C425864..426046%2C426224..426557%2C426729..426872%2C426944..427071);owner=coffea | |
| 27486 chr1 manual_curation exon 36829316 36829788 . - . Parent=GSCOCT00015968001 | |
| 27487 chr1 manual_curation exon 36829033 36829115 . - . Parent=GSCOCT00015968001 | |
| 27488 chr1 manual_curation exon 36826675 36826726 . - . Parent=GSCOCT00015968001 | |
| 27489 chr1 manual_curation exon 36826363 36826488 . - . Parent=GSCOCT00015968001 | |
| 27490 chr1 manual_curation exon 36826178 36826257 . - . Parent=GSCOCT00015968001 | |
| 27491 chr1 manual_curation exon 36825145 36825327 . - . Parent=GSCOCT00015968001 | |
| 27492 chr1 manual_curation exon 36824634 36824967 . - . Parent=GSCOCT00015968001 | |
| 27493 chr1 manual_curation exon 36824319 36824462 . - . Parent=GSCOCT00015968001 | |
| 27494 chr1 manual_curation exon 36823828 36824247 . - . Parent=GSCOCT00015968001 | |
| 27495 chr1 manual_curation CDS 36829316 36829484 . - 0 Parent=GSCOCT00015968001 | |
| 27496 chr1 manual_curation CDS 36829033 36829115 . - 1 Parent=GSCOCT00015968001 | |
| 27497 chr1 manual_curation CDS 36826675 36826726 . - 0 Parent=GSCOCT00015968001 | |
| 27498 chr1 manual_curation CDS 36826363 36826488 . - 1 Parent=GSCOCT00015968001 | |
| 27499 chr1 manual_curation CDS 36826178 36826257 . - 1 Parent=GSCOCT00015968001 | |
| 27500 chr1 manual_curation CDS 36825145 36825327 . - 0 Parent=GSCOCT00015968001 | |
| 27501 chr1 manual_curation CDS 36824634 36824967 . - 0 Parent=GSCOCT00015968001 | |
| 27502 chr1 manual_curation CDS 36824319 36824462 . - 1 Parent=GSCOCT00015968001 | |
| 27503 chr1 manual_curation CDS 36824120 36824247 . - 1 Parent=GSCOCT00015968001 | |
| 27504 chr1 manual_curation gene 36835671 36839258 . - . ID=GSCOCG00015967001;Name=Cc01_g20150 | |
| 27505 chr1 manual_curation mRNA 36835671 36839258 . - . ID=GSCOCT00015967001;Parent=GSCOCG00015967001;Name=Cc01_g20150 | |
| 27506 chr1 manual_curation polypeptide 36836056 36839162 . - . ID=GSCOCP00015967001;Dbxref=InterPro:IPR001993,InterPro:IPR018108,PANTHER:PTHR11896,PFAM:PF00153,PROFILE:PS50920,SUPERFAMILY:SSF103506,SwissProt:B0G143,SwissProt:P55851,SwissProt:Q5R5A8,TAIR:AT1G14140.1,TAIR:AT3G54110.1,TAIR:AT4G03115.1,TrEMBL:B9I9Y3,TrEMBL:D7TP52,TrEMBL:F4JI50;Derives_from=GSCOCT00015967001;Name=Cc01_g20150;Ontology_term=CC_evidence_code:ISS,GO:0005488,GO:0006810,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Putative Mitochondrial substrate carrier family protein ucpB,CC_functional_completeness:complete,CC_gene:ucpB,CC_gene:UCP2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015967001~ Putative Mitochondrial substrate carrier family protein ucpB~ ucpB~ complete;original_location=join(412029..412068%2C412280..412396%2C413089..413150%2C413247..413483%2C413546..413713%2C413839..413888%2C414480..414612%2C414842..414879%2C415039..415135);owner=coffea | |
| 27507 chr1 manual_curation exon 36839123 36839258 . - . Parent=GSCOCT00015967001 | |
| 27508 chr1 manual_curation exon 36838795 36838911 . - . Parent=GSCOCT00015967001 | |
| 27509 chr1 manual_curation exon 36838041 36838102 . - . Parent=GSCOCT00015967001 | |
| 27510 chr1 manual_curation exon 36837708 36837944 . - . Parent=GSCOCT00015967001 | |
| 27511 chr1 manual_curation exon 36837478 36837645 . - . Parent=GSCOCT00015967001 | |
| 27512 chr1 manual_curation exon 36837303 36837352 . - . Parent=GSCOCT00015967001 | |
| 27513 chr1 manual_curation exon 36836579 36836711 . - . Parent=GSCOCT00015967001 | |
| 27514 chr1 manual_curation exon 36836312 36836349 . - . Parent=GSCOCT00015967001 | |
| 27515 chr1 manual_curation exon 36835671 36836152 . - . Parent=GSCOCT00015967001 | |
| 27516 chr1 manual_curation CDS 36839123 36839162 . - 0 Parent=GSCOCT00015967001 | |
| 27517 chr1 manual_curation CDS 36838795 36838911 . - 1 Parent=GSCOCT00015967001 | |
| 27518 chr1 manual_curation CDS 36838041 36838102 . - 1 Parent=GSCOCT00015967001 | |
| 27519 chr1 manual_curation CDS 36837708 36837944 . - 0 Parent=GSCOCT00015967001 | |
| 27520 chr1 manual_curation CDS 36837478 36837645 . - 0 Parent=GSCOCT00015967001 | |
| 27521 chr1 manual_curation CDS 36837303 36837352 . - 0 Parent=GSCOCT00015967001 | |
| 27522 chr1 manual_curation CDS 36836579 36836711 . - 2 Parent=GSCOCT00015967001 | |
| 27523 chr1 manual_curation CDS 36836312 36836349 . - 0 Parent=GSCOCT00015967001 | |
| 27524 chr1 manual_curation CDS 36836056 36836152 . - 2 Parent=GSCOCT00015967001 | |
| 27525 chr1 manual_curation gene 36844621 36847712 . + . ID=GSCOCG00015965001;Name=Cc01_g20160 | |
| 27526 chr1 manual_curation mRNA 36844621 36847712 . + . ID=GSCOCT00015965001;Parent=GSCOCG00015965001;Name=Cc01_g20160 | |
| 27527 chr1 manual_curation polypeptide 36844748 36847712 . + . ID=GSCOCP00015965001;Dbxref=InterPro:IPR000690,InterPro:IPR003604,InterPro:IPR013085,PFAM:PF06220,PROFILE:PS50171,SMART:SM00451,SwissProt:C5XYW4,SwissProt:C5XZK6,SwissProt:F6HQ26,TAIR:AT4G03120.1,TrEMBL:B9GWP7,TrEMBL:B9S3X9,TrEMBL:Q53U41;Derives_from=GSCOCT00015965001;Name=Cc01_g20160;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0005634,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:U1 small nuclear ribonucleoprotein C,CC_functional_completeness:modules,CC_gene:VIT_07s0104g01170,CC_gene:Sb04g028260,CC_gene:Sb04g009880;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015965001~ U1 small nuclear ribonucleoprotein C~ VIT_07s0104g01170~ modules;original_location=complement(join(406371..406443%2C406217..406275%2C405955..406010%2C405808..405850%2C405350..405391%2C404969..405266%2C403479..403717));owner=coffea | |
| 27528 chr1 manual_curation exon 36847474 36847712 . + . Parent=GSCOCT00015965001 | |
| 27529 chr1 manual_curation exon 36845925 36846222 . + . Parent=GSCOCT00015965001 | |
| 27530 chr1 manual_curation exon 36845800 36845841 . + . Parent=GSCOCT00015965001 | |
| 27531 chr1 manual_curation exon 36845341 36845383 . + . Parent=GSCOCT00015965001 | |
| 27532 chr1 manual_curation exon 36845181 36845236 . + . Parent=GSCOCT00015965001 | |
| 27533 chr1 manual_curation exon 36844916 36844974 . + . Parent=GSCOCT00015965001 | |
| 27534 chr1 manual_curation exon 36844621 36844820 . + . Parent=GSCOCT00015965001 | |
| 27535 chr1 manual_curation CDS 36847474 36847712 . + 1 Parent=GSCOCT00015965001 | |
| 27536 chr1 manual_curation CDS 36845925 36846222 . + 0 Parent=GSCOCT00015965001 | |
| 27537 chr1 manual_curation CDS 36845800 36845841 . + 0 Parent=GSCOCT00015965001 | |
| 27538 chr1 manual_curation CDS 36845341 36845383 . + 2 Parent=GSCOCT00015965001 | |
| 27539 chr1 manual_curation CDS 36845181 36845236 . + 0 Parent=GSCOCT00015965001 | |
| 27540 chr1 manual_curation CDS 36844916 36844974 . + 1 Parent=GSCOCT00015965001 | |
| 27541 chr1 manual_curation CDS 36844748 36844820 . + 0 Parent=GSCOCT00015965001 | |
| 27542 chr1 manual_curation gene 36847880 36851775 . - . ID=GSCOCG00015964001;Name=Cc01_g20170 | |
| 27543 chr1 manual_curation mRNA 36847880 36851775 . - . ID=GSCOCT00015964001;Parent=GSCOCG00015964001;Name=Cc01_g20170 | |
| 27544 chr1 manual_curation polypeptide 36848998 36850953 . - . ID=GSCOCP00015964001;Dbxref=InterPro:IPR013089,InterPro:IPR013989,PANTHER:PTHR23230,PFAM:PF10539,PROFILE:PS51222,SMART:SM00767,SwissProt:P37707,TAIR:AT2G32910.1,TAIR:AT2G35140.1,TAIR:AT5G61910.1,TrEMBL:B9P4V0,TrEMBL:B9REY4,TrEMBL:D7TUX6;Derives_from=GSCOCT00015964001;Name=Cc01_g20170;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Predicted protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015964001~ Putative Predicted protein~ unknown_gene~ complete;original_location=join(400238..400267%2C400384..400968%2C401061..401180%2C401303..402193);owner=coffea | |
| 27545 chr1 manual_curation exon 36850924 36851775 . - . Parent=GSCOCT00015964001 | |
| 27546 chr1 manual_curation exon 36850223 36850807 . - . Parent=GSCOCT00015964001 | |
| 27547 chr1 manual_curation exon 36850011 36850130 . - . Parent=GSCOCT00015964001 | |
| 27548 chr1 manual_curation exon 36847880 36849888 . - . Parent=GSCOCT00015964001 | |
| 27549 chr1 manual_curation CDS 36850924 36850953 . - 0 Parent=GSCOCT00015964001 | |
| 27550 chr1 manual_curation CDS 36850223 36850807 . - 0 Parent=GSCOCT00015964001 | |
| 27551 chr1 manual_curation CDS 36850011 36850130 . - 0 Parent=GSCOCT00015964001 | |
| 27552 chr1 manual_curation CDS 36848998 36849888 . - 0 Parent=GSCOCT00015964001 | |
| 27553 chr1 manual_curation gene 36854099 36857951 . - . ID=GSCOCG00015963001;Name=Cc01_g20180 | |
| 27554 chr1 manual_curation mRNA 36854099 36857951 . - . ID=GSCOCT00015963001;Parent=GSCOCG00015963001;Name=Cc01_g20180 | |
| 27555 chr1 manual_curation polypeptide 36854303 36857951 . - . ID=GSCOCP00015963001;Dbxref=InterPro:IPR001357,PROFILE:PS50172,SUPERFAMILY:SSF52113,SwissProt:A0JNA8,SwissProt:Q6NZQ4,SwissProt:Q6ZW49,TAIR:AT2G41450.1,TAIR:AT3G21480.1,TAIR:AT4G03130.1,TrEMBL:B9I9Y2,TrEMBL:B9S3X8,TrEMBL:G7ISL3;Derives_from=GSCOCT00015963001;Name=Cc01_g20180;Ontology_term=CC_evidence_code:ISS,GO:0005622,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:Paxip1,CC_gene:PAXIP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015963001~ Hypothetical protein~ Paxip1~ missing_functional_completeness;original_location=join(393240..394021%2C394352..395174%2C395285..395554%2C395634..395714%2C396178..396289%2C396375..396441%2C396825..396888);owner=coffea | |
| 27556 chr1 manual_curation exon 36857170 36857951 . - . Parent=GSCOCT00015963001 | |
| 27557 chr1 manual_curation exon 36856017 36856839 . - . Parent=GSCOCT00015963001 | |
| 27558 chr1 manual_curation exon 36855637 36855906 . - . Parent=GSCOCT00015963001 | |
| 27559 chr1 manual_curation exon 36855477 36855557 . - . Parent=GSCOCT00015963001 | |
| 27560 chr1 manual_curation exon 36854902 36855013 . - . Parent=GSCOCT00015963001 | |
| 27561 chr1 manual_curation exon 36854750 36854816 . - . Parent=GSCOCT00015963001 | |
| 27562 chr1 manual_curation exon 36854099 36854366 . - . Parent=GSCOCT00015963001 | |
| 27563 chr1 manual_curation CDS 36857170 36857951 . - 0 Parent=GSCOCT00015963001 | |
| 27564 chr1 manual_curation CDS 36856017 36856839 . - 2 Parent=GSCOCT00015963001 | |
| 27565 chr1 manual_curation CDS 36855637 36855906 . - 0 Parent=GSCOCT00015963001 | |
| 27566 chr1 manual_curation CDS 36855477 36855557 . - 0 Parent=GSCOCT00015963001 | |
| 27567 chr1 manual_curation CDS 36854902 36855013 . - 0 Parent=GSCOCT00015963001 | |
| 27568 chr1 manual_curation CDS 36854750 36854816 . - 1 Parent=GSCOCT00015963001 | |
| 27569 chr1 manual_curation CDS 36854303 36854366 . - 2 Parent=GSCOCT00015963001 | |
| 27570 chr1 manual_curation gene 36859568 36863547 . + . ID=GSCOCG00015962001;Name=Cc01_g20190 | |
| 27571 chr1 manual_curation mRNA 36859568 36863547 . + . ID=GSCOCT00015962001;Parent=GSCOCG00015962001;Name=Cc01_g20190 | |
| 27572 chr1 manual_curation polypeptide 36859568 36863547 . + . ID=GSCOCP00015962001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR002198,InterPro:IPR002347,InterPro:IPR016040,InterPro:IPR020904,PANTHER:PTHR19410,PFAM:PF00106,PRINTS:PR00080,PRINTS:PR00081,PROSITE:PS00061,SwissProt:P50160,SwissProt:Q7FAE1,SwissProt:Q9C826,TAIR:AT3G26760.1,TAIR:AT3G26770.1,TAIR:AT4G03140.1,TrEMBL:A9PCT9,TrEMBL:B9S3X6,TrEMBL:I1JQG2;Derives_from=GSCOCT00015962001;Name=Cc01_g20190;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,GO:0016491,GO:0055114,CC_EC_number:1.1.1.100,PRODUCT:Putative Xanthoxin dehydrogenase,CC_functional_completeness:modules,CC_gene:ABA2,CC_gene:TS2,CC_gene:Os04g0179200;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015962001~ Putative Xanthoxin dehydrogenase~ ABA2~ modules;original_location=complement(join(391588..391623%2C389526..389728%2C389006..389083%2C387644..388436));owner=coffea | |
| 27573 chr1 manual_curation exon 36862755 36863547 . + . Parent=GSCOCT00015962001 | |
| 27574 chr1 manual_curation exon 36862108 36862185 . + . Parent=GSCOCT00015962001 | |
| 27575 chr1 manual_curation exon 36861463 36861665 . + . Parent=GSCOCT00015962001 | |
| 27576 chr1 manual_curation exon 36859568 36859603 . + . Parent=GSCOCT00015962001 | |
| 27577 chr1 manual_curation CDS 36862755 36863547 . + 2 Parent=GSCOCT00015962001 | |
| 27578 chr1 manual_curation CDS 36862108 36862185 . + 2 Parent=GSCOCT00015962001 | |
| 27579 chr1 manual_curation CDS 36861463 36861665 . + 0 Parent=GSCOCT00015962001 | |
| 27580 chr1 manual_curation CDS 36859568 36859603 . + 0 Parent=GSCOCT00015962001 | |
| 27581 chr1 manual_curation gene 36863622 36871714 . - . ID=GSCOCG00015961001;Name=Cc01_g20200 | |
| 27582 chr1 manual_curation mRNA 36863622 36871714 . - . ID=GSCOCT00015961001;Parent=GSCOCG00015961001;Name=Cc01_g20200 | |
| 27583 chr1 manual_curation polypeptide 36864122 36871295 . - . ID=GSCOCP00015961001;Dbxref=GENE3D:G3DSA:3.20.20.70,GENE3D:G3DSA:3.40.50.720,InterPro:IPR001381,InterPro:IPR006151,InterPro:IPR011342,InterPro:IPR013708,InterPro:IPR013785,InterPro:IPR016040,PFAM:PF01487,PFAM:PF01488,PFAM:PF08501,SwissProt:A9VHW1,SwissProt:Q818D0,SwissProt:Q9SQT8,TAIR:AT3G06350.1,TIGRFAMs:TIGR00507,TrEMBL:B9I9X4,TrEMBL:B9S3X5,TrEMBL:D7TUX1;Derives_from=GSCOCT00015961001;Name=Cc01_g20200;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0003855,GO:0004764,GO:0005488,GO:0005737,GO:0008152,GO:0050661,GO:0055114,CC_EC_number:1.1.1.25,CC_EC_number:1.1.1.25,PRODUCT:Putative Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase%2C chloroplastic,CC_functional_completeness:complete,CC_gene:EMB3004,CC_gene:aroE;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015961001~ Putative Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase%2C chloroplastic~ EMB3004~ complete;original_location=join(379896..380095%2C383351..383456%2C383610..383840%2C384365..384705%2C384936..384999%2C385773..385881%2C386075..386224%2C386304..386452%2C386559..386721%2C387026..387069);owner=coffea | |
| 27584 chr1 manual_curation exon 36871096 36871714 . - . Parent=GSCOCT00015961001 | |
| 27585 chr1 manual_curation exon 36867735 36867840 . - . Parent=GSCOCT00015961001 | |
| 27586 chr1 manual_curation exon 36867351 36867581 . - . Parent=GSCOCT00015961001 | |
| 27587 chr1 manual_curation exon 36866486 36866826 . - . Parent=GSCOCT00015961001 | |
| 27588 chr1 manual_curation exon 36866192 36866255 . - . Parent=GSCOCT00015961001 | |
| 27589 chr1 manual_curation exon 36865310 36865418 . - . Parent=GSCOCT00015961001 | |
| 27590 chr1 manual_curation exon 36864967 36865116 . - . Parent=GSCOCT00015961001 | |
| 27591 chr1 manual_curation exon 36864739 36864887 . - . Parent=GSCOCT00015961001 | |
| 27592 chr1 manual_curation exon 36864470 36864632 . - . Parent=GSCOCT00015961001 | |
| 27593 chr1 manual_curation exon 36863622 36864165 . - . Parent=GSCOCT00015961001 | |
| 27594 chr1 manual_curation CDS 36871096 36871295 . - 0 Parent=GSCOCT00015961001 | |
| 27595 chr1 manual_curation CDS 36867735 36867840 . - 2 Parent=GSCOCT00015961001 | |
| 27596 chr1 manual_curation CDS 36867351 36867581 . - 0 Parent=GSCOCT00015961001 | |
| 27597 chr1 manual_curation CDS 36866486 36866826 . - 0 Parent=GSCOCT00015961001 | |
| 27598 chr1 manual_curation CDS 36866192 36866255 . - 2 Parent=GSCOCT00015961001 | |
| 27599 chr1 manual_curation CDS 36865310 36865418 . - 0 Parent=GSCOCT00015961001 | |
| 27600 chr1 manual_curation CDS 36864967 36865116 . - 1 Parent=GSCOCT00015961001 | |
| 27601 chr1 manual_curation CDS 36864739 36864887 . - 1 Parent=GSCOCT00015961001 | |
| 27602 chr1 manual_curation CDS 36864470 36864632 . - 0 Parent=GSCOCT00015961001 | |
| 27603 chr1 manual_curation CDS 36864122 36864165 . - 1 Parent=GSCOCT00015961001 | |
| 27604 chr1 manual_curation gene 36877571 36880115 . - . ID=GSCOCG00015960001;Name=Cc01_g20210 | |
| 27605 chr1 manual_curation mRNA 36877571 36880115 . - . ID=GSCOCT00015960001;Parent=GSCOCG00015960001;Name=Cc01_g20210 | |
| 27606 chr1 manual_curation polypeptide 36877928 36879827 . - . ID=GSCOCP00015960001;Dbxref=InterPro:IPR000103,InterPro:IPR013027,InterPro:IPR020946,PFAM:PF00743,PRINTS:PR00368,PRINTS:PR00469,SwissProt:Q9FVQ0,SwissProt:Q9LPL3,SwissProt:Q9SVQ1,TAIR:AT1G21430.1,TAIR:AT1G48910.1,TAIR:AT4G13260.1,TrEMBL:B9IBT9,TrEMBL:B9S3X0,TrEMBL:E7BKW9;Derives_from=GSCOCT00015960001;Name=Cc01_g20210;Ontology_term=CC_evidence_code:ISS,GO:0004499,GO:0016491,GO:0050660,GO:0050661,GO:0055114,CC_EC_number:1.14.13.8,CC_EC_number:1.14.13.8,PRODUCT:Putative Flavin-containing monooxygenase YUCCA10,CC_functional_completeness:complete,CC_gene:YUC10,CC_gene:YUC11,CC_gene:YUC2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015960001~ Putative Flavin-containing monooxygenase YUCCA10~ YUC10~ complete;original_location=join(371364..371602%2C371663..371990%2C372117..372353%2C372751..372873%2C373093..373263);owner=coffea | |
| 27607 chr1 manual_curation exon 36879589 36880115 . - . Parent=GSCOCT00015960001 | |
| 27608 chr1 manual_curation exon 36879201 36879528 . - . Parent=GSCOCT00015960001 | |
| 27609 chr1 manual_curation exon 36878838 36879074 . - . Parent=GSCOCT00015960001 | |
| 27610 chr1 manual_curation exon 36878318 36878440 . - . Parent=GSCOCT00015960001 | |
| 27611 chr1 manual_curation exon 36877571 36878098 . - . Parent=GSCOCT00015960001 | |
| 27612 chr1 manual_curation CDS 36879589 36879827 . - 0 Parent=GSCOCT00015960001 | |
| 27613 chr1 manual_curation CDS 36879201 36879528 . - 2 Parent=GSCOCT00015960001 | |
| 27614 chr1 manual_curation CDS 36878838 36879074 . - 0 Parent=GSCOCT00015960001 | |
| 27615 chr1 manual_curation CDS 36878318 36878440 . - 0 Parent=GSCOCT00015960001 | |
| 27616 chr1 manual_curation CDS 36877928 36878098 . - 0 Parent=GSCOCT00015960001 | |
| 27617 chr1 manual_curation gene 36881132 36883676 . - . ID=GSCOCG00015959001;Name=Cc01_g20220 | |
| 27618 chr1 manual_curation mRNA 36881132 36883676 . - . ID=GSCOCT00015959001;Parent=GSCOCG00015959001;Name=Cc01_g20220 | |
| 27619 chr1 manual_curation polypeptide 36881443 36883452 . - . ID=GSCOCP00015959001;Dbxref=TAIR:AT4G03150.1,TrEMBL:C6T4V2,TrEMBL:D7TP50,TrEMBL:I1NB07;Derives_from=GSCOCT00015959001;Name=Cc01_g20220;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015959001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=join(367739..368002%2C369488..369748);owner=coffea | |
| 27620 chr1 manual_curation exon 36883189 36883676 . - . Parent=GSCOCT00015959001 | |
| 27621 chr1 manual_curation exon 36881132 36881703 . - . Parent=GSCOCT00015959001 | |
| 27622 chr1 manual_curation CDS 36883189 36883452 . - 0 Parent=GSCOCT00015959001 | |
| 27623 chr1 manual_curation CDS 36881443 36881703 . - 0 Parent=GSCOCT00015959001 | |
| 27624 chr1 manual_curation gene 36899358 36900860 . + . ID=GSCOCG00015958001;Name=Cc01_g20230 | |
| 27625 chr1 manual_curation mRNA 36899358 36900860 . + . ID=GSCOCT00015958001;Parent=GSCOCG00015958001;Name=Cc01_g20230 | |
| 27626 chr1 manual_curation polypeptide 36899640 36900860 . + . ID=GSCOCP00015958001;Dbxref=InterPro:IPR015724,PANTHER:PTHR22939:SF1,SwissProt:O82261,TAIR:AT2G47940.1,TrEMBL:B9I9X1,TrEMBL:B9S3X1,TrEMBL:D7TP48;Derives_from=GSCOCT00015958001;Name=Cc01_g20230;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protease Do-like 2%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:DEGP2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015958001~ Putative Protease Do-like 2%2C chloroplastic~ DEGP2~ fragment;original_location=complement(join(351312..351551%2C350725..350910%2C350574..350624%2C350331..350492));owner=coffea | |
| 27627 chr1 manual_curation exon 36900699 36900860 . + . Parent=GSCOCT00015958001 | |
| 27628 chr1 manual_curation exon 36900567 36900617 . + . Parent=GSCOCT00015958001 | |
| 27629 chr1 manual_curation exon 36900281 36900466 . + . Parent=GSCOCT00015958001 | |
| 27630 chr1 manual_curation exon 36899358 36899879 . + . Parent=GSCOCT00015958001 | |
| 27631 chr1 manual_curation CDS 36900699 36900860 . + 0 Parent=GSCOCT00015958001 | |
| 27632 chr1 manual_curation CDS 36900567 36900617 . + 0 Parent=GSCOCT00015958001 | |
| 27633 chr1 manual_curation CDS 36900281 36900466 . + 0 Parent=GSCOCT00015958001 | |
| 27634 chr1 manual_curation CDS 36899640 36899879 . + 0 Parent=GSCOCT00015958001 | |
| 27635 chr1 manual_curation gene 36900928 36909428 . + . ID=GSCOCG00015957001;Name=Cc01_g20240 | |
| 27636 chr1 manual_curation mRNA 36900928 36909428 . + . ID=GSCOCT00015957001;Parent=GSCOCG00015957001;Name=Cc01_g20240 | |
| 27637 chr1 manual_curation polypeptide 36900928 36909034 . + . ID=GSCOCP00015957001;Dbxref=InterPro:IPR001254,InterPro:IPR001478,InterPro:IPR001940,InterPro:IPR009003,InterPro:IPR015724,PANTHER:PTHR22939:SF1,PFAM:PF00089,PRINTS:PR00834,PROFILE:PS50106,SUPERFAMILY:SSF50156,SUPERFAMILY:SSF50494,SwissProt:O82261,SwissProt:Q9FIV6,SwissProt:Q9FL12,TAIR:AT2G47940.1,TAIR:AT5G36950.1,TAIR:AT5G40200.1,TrEMBL:B3H581,TrEMBL:B9S3X1,TrEMBL:D7TP48;Derives_from=GSCOCT00015957001;Name=Cc01_g20240;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004252,GO:0005515,GO:0006508,CC_EC_number:missing_EC_number,PRODUCT:Protease Do-like 2%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:DEGP2,CC_gene:DEGP9,CC_gene:DEGP10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015957001~ Protease Do-like 2%2C chloroplastic~ DEGP2~ fragment;original_location=complement(join(350207..350263%2C349772..349816%2C349236..349343%2C348207..348284%2C347894..347960%2C347659..347717%2C347251..347350%2C346440..346519%2C345407..345463%2C344297..344400%2C343555..343642%2C343364..343449%2C343217..343241%2C343026..343097%2C342624..342698%2C342476..342536%2C342157..342404));owner=coffea | |
| 27638 chr1 manual_curation exon 36908787 36909428 . + . Parent=GSCOCT00015957001 | |
| 27639 chr1 manual_curation exon 36908655 36908715 . + . Parent=GSCOCT00015957001 | |
| 27640 chr1 manual_curation exon 36908493 36908567 . + . Parent=GSCOCT00015957001 | |
| 27641 chr1 manual_curation exon 36908094 36908165 . + . Parent=GSCOCT00015957001 | |
| 27642 chr1 manual_curation exon 36907950 36907974 . + . Parent=GSCOCT00015957001 | |
| 27643 chr1 manual_curation exon 36907742 36907827 . + . Parent=GSCOCT00015957001 | |
| 27644 chr1 manual_curation exon 36907549 36907636 . + . Parent=GSCOCT00015957001 | |
| 27645 chr1 manual_curation exon 36906791 36906894 . + . Parent=GSCOCT00015957001 | |
| 27646 chr1 manual_curation exon 36905728 36905784 . + . Parent=GSCOCT00015957001 | |
| 27647 chr1 manual_curation exon 36904672 36904751 . + . Parent=GSCOCT00015957001 | |
| 27648 chr1 manual_curation exon 36903841 36903940 . + . Parent=GSCOCT00015957001 | |
| 27649 chr1 manual_curation exon 36903474 36903532 . + . Parent=GSCOCT00015957001 | |
| 27650 chr1 manual_curation exon 36903231 36903297 . + . Parent=GSCOCT00015957001 | |
| 27651 chr1 manual_curation exon 36902907 36902984 . + . Parent=GSCOCT00015957001 | |
| 27652 chr1 manual_curation exon 36901848 36901955 . + . Parent=GSCOCT00015957001 | |
| 27653 chr1 manual_curation exon 36901375 36901419 . + . Parent=GSCOCT00015957001 | |
| 27654 chr1 manual_curation exon 36900928 36900984 . + . Parent=GSCOCT00015957001 | |
| 27655 chr1 manual_curation CDS 36908787 36909034 . + 1 Parent=GSCOCT00015957001 | |
| 27656 chr1 manual_curation CDS 36908655 36908715 . + 0 Parent=GSCOCT00015957001 | |
| 27657 chr1 manual_curation CDS 36908493 36908567 . + 0 Parent=GSCOCT00015957001 | |
| 27658 chr1 manual_curation CDS 36908094 36908165 . + 0 Parent=GSCOCT00015957001 | |
| 27659 chr1 manual_curation CDS 36907950 36907974 . + 2 Parent=GSCOCT00015957001 | |
| 27660 chr1 manual_curation CDS 36907742 36907827 . + 0 Parent=GSCOCT00015957001 | |
| 27661 chr1 manual_curation CDS 36907549 36907636 . + 2 Parent=GSCOCT00015957001 | |
| 27662 chr1 manual_curation CDS 36906791 36906894 . + 0 Parent=GSCOCT00015957001 | |
| 27663 chr1 manual_curation CDS 36905728 36905784 . + 0 Parent=GSCOCT00015957001 | |
| 27664 chr1 manual_curation CDS 36904672 36904751 . + 1 Parent=GSCOCT00015957001 | |
| 27665 chr1 manual_curation CDS 36903841 36903940 . + 0 Parent=GSCOCT00015957001 | |
| 27666 chr1 manual_curation CDS 36903474 36903532 . + 1 Parent=GSCOCT00015957001 | |
| 27667 chr1 manual_curation CDS 36903231 36903297 . + 0 Parent=GSCOCT00015957001 | |
| 27668 chr1 manual_curation CDS 36902907 36902984 . + 0 Parent=GSCOCT00015957001 | |
| 27669 chr1 manual_curation CDS 36901848 36901955 . + 0 Parent=GSCOCT00015957001 | |
| 27670 chr1 manual_curation CDS 36901375 36901419 . + 0 Parent=GSCOCT00015957001 | |
| 27671 chr1 manual_curation CDS 36900928 36900984 . + 0 Parent=GSCOCT00015957001 | |
| 27672 chr1 manual_curation gene 36909931 36911920 . - . ID=GSCOCG00015956001;Name=Cc01_g20250 | |
| 27673 chr1 manual_curation mRNA 36909931 36911920 . - . ID=GSCOCT00015956001;Parent=GSCOCG00015956001;Name=Cc01_g20250 | |
| 27674 chr1 manual_curation polypeptide 36909931 36911809 . - . ID=GSCOCP00015956001;Dbxref=InterPro:IPR000103,InterPro:IPR013027,InterPro:IPR020946,PFAM:PF00743,PRINTS:PR00368,PRINTS:PR00469,SwissProt:Q9FVQ0,SwissProt:Q9LPL3,SwissProt:Q9SVQ1,TAIR:AT1G21430.1,TAIR:AT1G48910.1,TAIR:AT4G13260.1,TrEMBL:B9IBT9,TrEMBL:E7BKW9,TrEMBL:F6HQ22;Derives_from=GSCOCT00015956001;Name=Cc01_g20250;Ontology_term=CC_evidence_code:ISS,GO:0004499,GO:0016491,GO:0050660,GO:0050661,GO:0055114,CC_EC_number:1.14.13.8,CC_EC_number:1.14.13.8,PRODUCT:Flavin-containing monooxygenase YUCCA10,CC_functional_completeness:complete,CC_gene:YUC10,CC_gene:YUC11,CC_gene:YUC2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015956001~ Flavin-containing monooxygenase YUCCA10~ YUC10~ complete;original_location=join(339382..340008%2C340137..340373%2C340784..340906%2C341090..341260);owner=coffea | |
| 27675 chr1 manual_curation exon 36911183 36911920 . - . Parent=GSCOCT00015956001 | |
| 27676 chr1 manual_curation exon 36910818 36911054 . - . Parent=GSCOCT00015956001 | |
| 27677 chr1 manual_curation exon 36910285 36910407 . - . Parent=GSCOCT00015956001 | |
| 27678 chr1 manual_curation exon 36909931 36910101 . - . Parent=GSCOCT00015956001 | |
| 27679 chr1 manual_curation CDS 36911183 36911809 . - 0 Parent=GSCOCT00015956001 | |
| 27680 chr1 manual_curation CDS 36910818 36911054 . - 0 Parent=GSCOCT00015956001 | |
| 27681 chr1 manual_curation CDS 36910285 36910407 . - 0 Parent=GSCOCT00015956001 | |
| 27682 chr1 manual_curation CDS 36909931 36910101 . - 0 Parent=GSCOCT00015956001 | |
| 27683 chr1 manual_curation gene 36919447 36923321 . - . ID=GSCOCG00015954001;Name=Cc01_g20260 | |
| 27684 chr1 manual_curation mRNA 36919447 36923321 . - . ID=GSCOCT00015954001;Parent=GSCOCG00015954001;Name=Cc01_g20260 | |
| 27685 chr1 manual_curation polypeptide 36919995 36922296 . - . ID=GSCOCP00015954001;Dbxref=InterPro:IPR011684,PFAM:PF07765,TAIR:AT1G03470.1,TAIR:AT2G47920.1,TAIR:AT3G22790.1,TrEMBL:B9I9W9,TrEMBL:B9S3W8,TrEMBL:F6HQ21;Derives_from=GSCOCT00015954001;Name=Cc01_g20260;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Kinase interacting (KIP1-like) family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015954001~ Putative Kinase interacting (KIP1-like) family protein~ unknown_gene~ complete;original_location=join(328895..329006%2C330349..330576%2C330757..331196);owner=coffea | |
| 27686 chr1 manual_curation exon 36923092 36923321 . - . Parent=GSCOCT00015954001 | |
| 27687 chr1 manual_curation exon 36922619 36922901 . - . Parent=GSCOCT00015954001 | |
| 27688 chr1 manual_curation exon 36922185 36922314 . - . Parent=GSCOCT00015954001 | |
| 27689 chr1 manual_curation exon 36920615 36920842 . - . Parent=GSCOCT00015954001 | |
| 27690 chr1 manual_curation exon 36919447 36920434 . - . Parent=GSCOCT00015954001 | |
| 27691 chr1 manual_curation CDS 36922185 36922296 . - 0 Parent=GSCOCT00015954001 | |
| 27692 chr1 manual_curation CDS 36920615 36920842 . - 1 Parent=GSCOCT00015954001 | |
| 27693 chr1 manual_curation CDS 36919995 36920434 . - 1 Parent=GSCOCT00015954001 | |
| 27694 chr1 manual_curation gene 36923777 36930765 . - . ID=GSCOCG00015953001;Name=Cc01_g20270 | |
| 27695 chr1 manual_curation mRNA 36923777 36930765 . - . ID=GSCOCT00015953001;Parent=GSCOCG00015953001;Name=Cc01_g20270 | |
| 27696 chr1 manual_curation polypeptide 36924200 36930466 . - . ID=GSCOCP00015953001;Dbxref=InterPro:IPR004709,InterPro:IPR006153,InterPro:IPR018407,InterPro:IPR018422,PANTHER:PTHR10110,PANTHER:PTHR10110:SF2,PFAM:PF00999,PRINTS:PR01084,SwissProt:Q56XP4,SwissProt:Q68KI4,SwissProt:Q84WG1,TAIR:AT3G05030.1,TAIR:AT3G06370.1,TAIR:AT5G27150.1,TIGRFAMs:TIGR00840,TrEMBL:A5BKR5,TrEMBL:D0V1M5,TrEMBL:F6HTY8;Derives_from=GSCOCT00015953001;Name=Cc01_g20270;Ontology_term=CC_evidence_code:ISS,GO:0006812,GO:0006814,GO:0006885,GO:0015299,GO:0015385,GO:0016021,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Sodium/hydrogen exchanger 2,CC_functional_completeness:complete,CC_gene:NHX2,CC_gene:NHX1,CC_gene:NHX3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015953001~ Sodium/hydrogen exchanger 2~ NHX2~ complete;original_location=join(320725..320883%2C321035..321153%2C321260..321357%2C321945..322004%2C322445..322491%2C322566..322760%2C323645..323691%2C324065..324131%2C324365..324465%2C324608..324709%2C324924..325062%2C325133..325195%2C325934..326017%2C326659..326991);owner=coffea | |
| 27697 chr1 manual_curation exon 36930623 36930765 . - . Parent=GSCOCT00015953001 | |
| 27698 chr1 manual_curation exon 36930308 36930500 . - . Parent=GSCOCT00015953001 | |
| 27699 chr1 manual_curation exon 36930038 36930156 . - . Parent=GSCOCT00015953001 | |
| 27700 chr1 manual_curation exon 36929834 36929931 . - . Parent=GSCOCT00015953001 | |
| 27701 chr1 manual_curation exon 36929187 36929246 . - . Parent=GSCOCT00015953001 | |
| 27702 chr1 manual_curation exon 36928700 36928746 . - . Parent=GSCOCT00015953001 | |
| 27703 chr1 manual_curation exon 36928431 36928625 . - . Parent=GSCOCT00015953001 | |
| 27704 chr1 manual_curation exon 36927500 36927546 . - . Parent=GSCOCT00015953001 | |
| 27705 chr1 manual_curation exon 36927060 36927126 . - . Parent=GSCOCT00015953001 | |
| 27706 chr1 manual_curation exon 36926726 36926826 . - . Parent=GSCOCT00015953001 | |
| 27707 chr1 manual_curation exon 36926482 36926583 . - . Parent=GSCOCT00015953001 | |
| 27708 chr1 manual_curation exon 36926129 36926267 . - . Parent=GSCOCT00015953001 | |
| 27709 chr1 manual_curation exon 36925996 36926058 . - . Parent=GSCOCT00015953001 | |
| 27710 chr1 manual_curation exon 36925174 36925257 . - . Parent=GSCOCT00015953001 | |
| 27711 chr1 manual_curation exon 36923777 36924532 . - . Parent=GSCOCT00015953001 | |
| 27712 chr1 manual_curation CDS 36930308 36930466 . - 0 Parent=GSCOCT00015953001 | |
| 27713 chr1 manual_curation CDS 36930038 36930156 . - 0 Parent=GSCOCT00015953001 | |
| 27714 chr1 manual_curation CDS 36929834 36929931 . - 2 Parent=GSCOCT00015953001 | |
| 27715 chr1 manual_curation CDS 36929187 36929246 . - 1 Parent=GSCOCT00015953001 | |
| 27716 chr1 manual_curation CDS 36928700 36928746 . - 1 Parent=GSCOCT00015953001 | |
| 27717 chr1 manual_curation CDS 36928431 36928625 . - 0 Parent=GSCOCT00015953001 | |
| 27718 chr1 manual_curation CDS 36927500 36927546 . - 0 Parent=GSCOCT00015953001 | |
| 27719 chr1 manual_curation CDS 36927060 36927126 . - 2 Parent=GSCOCT00015953001 | |
| 27720 chr1 manual_curation CDS 36926726 36926826 . - 0 Parent=GSCOCT00015953001 | |
| 27721 chr1 manual_curation CDS 36926482 36926583 . - 2 Parent=GSCOCT00015953001 | |
| 27722 chr1 manual_curation CDS 36926129 36926267 . - 2 Parent=GSCOCT00015953001 | |
| 27723 chr1 manual_curation CDS 36925996 36926058 . - 0 Parent=GSCOCT00015953001 | |
| 27724 chr1 manual_curation CDS 36925174 36925257 . - 0 Parent=GSCOCT00015953001 | |
| 27725 chr1 manual_curation CDS 36924200 36924532 . - 0 Parent=GSCOCT00015953001 | |
| 27726 chr1 manual_curation gene 36934040 36939096 . + . ID=GSCOCG00015952001;Name=Cc01_g20280 | |
| 27727 chr1 manual_curation mRNA 36934040 36939096 . + . ID=GSCOCT00015952001;Parent=GSCOCG00015952001;Name=Cc01_g20280 | |
| 27728 chr1 manual_curation polypeptide 36934871 36938178 . + . ID=GSCOCP00015952001;Dbxref=GENE3D:G3DSA:3.20.90.10,InterPro:IPR000007,InterPro:IPR001810,InterPro:IPR018066,PFAM:PF00646,PFAM:PF01167,PRINTS:PR01573,PROSITE:PS01201,SUPERFAMILY:SSF54518,SwissProt:Q10LG8,SwissProt:Q8H485,SwissProt:Q8VY21,TAIR:AT1G25280.1,TAIR:AT1G76900.1,TAIR:AT2G47900.3,TrEMBL:D7LHD5,TrEMBL:D9ZJD8,TrEMBL:F6HQ19;Derives_from=GSCOCT00015952001;Name=Cc01_g20280;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Tubby-like F-box protein 3,CC_functional_completeness:complete,CC_gene:TULP3,CC_gene:TULP6,CC_gene:TULP11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015952001~ Tubby-like F-box protein 3~ TULP3~ complete;original_location=complement(join(315970..316320%2C314300..314387%2C313943..314072%2C313684..313863%2C313013..313487));owner=coffea | |
| 27729 chr1 manual_curation exon 36937704 36939096 . + . Parent=GSCOCT00015952001 | |
| 27730 chr1 manual_curation exon 36937328 36937507 . + . Parent=GSCOCT00015952001 | |
| 27731 chr1 manual_curation exon 36937119 36937248 . + . Parent=GSCOCT00015952001 | |
| 27732 chr1 manual_curation exon 36936804 36936891 . + . Parent=GSCOCT00015952001 | |
| 27733 chr1 manual_curation exon 36934040 36935221 . + . Parent=GSCOCT00015952001 | |
| 27734 chr1 manual_curation CDS 36937704 36938178 . + 2 Parent=GSCOCT00015952001 | |
| 27735 chr1 manual_curation CDS 36937328 36937507 . + 2 Parent=GSCOCT00015952001 | |
| 27736 chr1 manual_curation CDS 36937119 36937248 . + 1 Parent=GSCOCT00015952001 | |
| 27737 chr1 manual_curation CDS 36936804 36936891 . + 0 Parent=GSCOCT00015952001 | |
| 27738 chr1 manual_curation CDS 36934871 36935221 . + 0 Parent=GSCOCT00015952001 | |
| 27739 chr1 manual_curation gene 36939153 36940696 . - . ID=GSCOCG00015951001;Name=Cc01_g20290 | |
| 27740 chr1 manual_curation mRNA 36939153 36940696 . - . ID=GSCOCT00015951001;Parent=GSCOCG00015951001;Name=Cc01_g20290 | |
| 27741 chr1 manual_curation polypeptide 36939716 36940423 . - . ID=GSCOCP00015951001;Derives_from=GSCOCT00015951001;Name=Cc01_g20290;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015951001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(310768..310919%2C311391..311475);owner=coffea | |
| 27742 chr1 manual_curation exon 36940272 36940696 . - . Parent=GSCOCT00015951001 | |
| 27743 chr1 manual_curation exon 36939153 36939800 . - . Parent=GSCOCT00015951001 | |
| 27744 chr1 manual_curation CDS 36940272 36940423 . - 0 Parent=GSCOCT00015951001 | |
| 27745 chr1 manual_curation CDS 36939716 36939800 . - 2 Parent=GSCOCT00015951001 | |
| 27746 chr1 manual_curation gene 36948307 36952351 . + . ID=GSCOCG00015950001;Name=Cc01_g20300 | |
| 27747 chr1 manual_curation mRNA 36948307 36952351 . + . ID=GSCOCT00015950001;Parent=GSCOCG00015950001;Name=Cc01_g20300 | |
| 27748 chr1 manual_curation polypeptide 36948914 36951890 . + . ID=GSCOCP00015950001;Dbxref=InterPro:IPR006553,SMART:SM00367,SwissProt:Q0DKP3,SwissProt:Q570C0,SwissProt:Q9ZR12,TAIR:AT1G12820.1,TAIR:AT3G62980.1,TAIR:AT4G03190.1,TrEMBL:C7E4R3,TrEMBL:F6HQ17,TrEMBL:I1JFG2;Derives_from=GSCOCT00015950001;Name=Cc01_g20300;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein TRANSPORT INHIBITOR RESPONSE 1,CC_functional_completeness:complete,CC_gene:TIR1,CC_gene:GRH1,CC_gene:Os05g0150500;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015950001~ Protein TRANSPORT INHIBITOR RESPONSE 1~ TIR1~ complete;original_location=complement(join(302108..302277%2C300419..300911%2C299301..300098));owner=coffea | |
| 27749 chr1 manual_curation exon 36951093 36952351 . + . Parent=GSCOCT00015950001 | |
| 27750 chr1 manual_curation exon 36950280 36950772 . + . Parent=GSCOCT00015950001 | |
| 27751 chr1 manual_curation exon 36948307 36949083 . + . Parent=GSCOCT00015950001 | |
| 27752 chr1 manual_curation CDS 36951093 36951890 . + 0 Parent=GSCOCT00015950001 | |
| 27753 chr1 manual_curation CDS 36950280 36950772 . + 2 Parent=GSCOCT00015950001 | |
| 27754 chr1 manual_curation CDS 36948914 36949083 . + 0 Parent=GSCOCT00015950001 | |
| 27755 chr1 manual_curation gene 36956919 36957674 . - . ID=GSCOCG00015949001;Name=Cc01_g20310 | |
| 27756 chr1 manual_curation mRNA 36956919 36957674 . - . ID=GSCOCT00015949001;Parent=GSCOCG00015949001;Name=Cc01_g20310 | |
| 27757 chr1 manual_curation polypeptide 36957471 36957674 . - . ID=GSCOCP00015949001;Derives_from=GSCOCT00015949001;Name=Cc01_g20310;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015949001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=293517..293720;owner=coffea | |
| 27758 chr1 manual_curation exon 36956919 36957674 . - . Parent=GSCOCT00015949001 | |
| 27759 chr1 manual_curation CDS 36957471 36957674 . - 0 Parent=GSCOCT00015949001 | |
| 27760 chr1 manual_curation gene 36958722 36960991 . - . ID=GSCOCG00015948001;Name=Cc01_g20320 | |
| 27761 chr1 manual_curation mRNA 36958722 36960991 . - . ID=GSCOCT00015948001;Parent=GSCOCG00015948001;Name=Cc01_g20320 | |
| 27762 chr1 manual_curation polypeptide 36959044 36960804 . - . ID=GSCOCP00015948001;Dbxref=InterPro:IPR013730,PFAM:PF08524,TAIR:AT4G03180.1,TrEMBL:C6TAW0,TrEMBL:I1JQH0,TrEMBL:I1NB14;Derives_from=GSCOCT00015948001;Name=Cc01_g20320;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:CONTAINS InterPro DOMAIN/s,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015948001~ CONTAINS InterPro DOMAIN/s: rRNA processing (InterPro:IPR013730)%3B Has 898 Blast hits to 687 proteins in 142 species: Archae - 2%3B Bacteria - 28%3B Metazoa - 200%3B Fungi - 99%3B Plants - 63%3B Viruses - 0%3B Other Eukaryotes - 506 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(290387..290462%2C291501..291598%2C291857..292147);owner=coffea | |
| 27763 chr1 manual_curation exon 36960729 36960991 . - . Parent=GSCOCT00015948001 | |
| 27764 chr1 manual_curation exon 36959593 36959690 . - . Parent=GSCOCT00015948001 | |
| 27765 chr1 manual_curation exon 36958722 36959334 . - . Parent=GSCOCT00015948001 | |
| 27766 chr1 manual_curation CDS 36960729 36960804 . - 0 Parent=GSCOCT00015948001 | |
| 27767 chr1 manual_curation CDS 36959593 36959690 . - 1 Parent=GSCOCT00015948001 | |
| 27768 chr1 manual_curation CDS 36959044 36959334 . - 0 Parent=GSCOCT00015948001 | |
| 27769 chr1 manual_curation gene 36963681 36965285 . - . ID=GSCOCG00015947001;Name=Cc01_g20330 | |
| 27770 chr1 manual_curation mRNA 36963681 36965285 . - . ID=GSCOCT00015947001;Parent=GSCOCG00015947001;Name=Cc01_g20330 | |
| 27771 chr1 manual_curation polypeptide 36963681 36965196 . - . ID=GSCOCP00015947001;Dbxref=InterPro:IPR004316,InterPro:IPR018169,InterPro:IPR018179,PANTHER:PTHR10791,PANTHER:PTHR10791:SF6,PFAM:PF03083,SwissProt:B8BKP4,SwissProt:Q2R3P9,SwissProt:Q9FPN0,TAIR:AT3G48740.1,TAIR:AT4G25010.1,TAIR:AT5G23660.1,TrEMBL:B9S3W0,TrEMBL:F6HQ15,TrEMBL:I1ILL9;Derives_from=GSCOCT00015947001;Name=Cc01_g20330;Ontology_term=CC_evidence_code:ISS,GO:0016020,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Bidirectional sugar transporter SWEET14,CC_functional_completeness:fragment,CC_gene:SWEET14,CC_gene:NEC1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015947001~ Bidirectional sugar transporter SWEET14~ SWEET14~ fragment;original_location=join(285995..286043%2C286168..286204%2C286368..286578%2C286717..286878%2C287023..287142%2C287286..287510);owner=coffea | |
| 27772 chr1 manual_curation exon 36965148 36965285 . - . Parent=GSCOCT00015947001 | |
| 27773 chr1 manual_curation exon 36964987 36965023 . - . Parent=GSCOCT00015947001 | |
| 27774 chr1 manual_curation exon 36964613 36964823 . - . Parent=GSCOCT00015947001 | |
| 27775 chr1 manual_curation exon 36964313 36964474 . - . Parent=GSCOCT00015947001 | |
| 27776 chr1 manual_curation exon 36964049 36964168 . - . Parent=GSCOCT00015947001 | |
| 27777 chr1 manual_curation exon 36963681 36963905 . - . Parent=GSCOCT00015947001 | |
| 27778 chr1 manual_curation CDS 36965148 36965196 . - 0 Parent=GSCOCT00015947001 | |
| 27779 chr1 manual_curation CDS 36964987 36965023 . - 1 Parent=GSCOCT00015947001 | |
| 27780 chr1 manual_curation CDS 36964613 36964823 . - 2 Parent=GSCOCT00015947001 | |
| 27781 chr1 manual_curation CDS 36964313 36964474 . - 0 Parent=GSCOCT00015947001 | |
| 27782 chr1 manual_curation CDS 36964049 36964168 . - 0 Parent=GSCOCT00015947001 | |
| 27783 chr1 manual_curation CDS 36963681 36963905 . - 0 Parent=GSCOCT00015947001 | |
| 27784 chr1 manual_curation gene 36971329 36974947 . - . ID=GSCOCG00015945001;Name=Cc01_g20340 | |
| 27785 chr1 manual_curation mRNA 36971329 36974947 . - . ID=GSCOCT00015945001;Parent=GSCOCG00015945001;Name=Cc01_g20340 | |
| 27786 chr1 manual_curation polypeptide 36971956 36973988 . - . ID=GSCOCP00015945001;Dbxref=InterPro:IPR010402,PFAM:PF06203,PROFILE:PS51017,SwissProt:O82256,SwissProt:Q9C7E8,TAIR:AT1G28050.1,TAIR:AT2G33500.1,TAIR:AT2G47890.1,TrEMBL:B9S3V9,TrEMBL:D0EP04,TrEMBL:F6HQ13;Derives_from=GSCOCT00015945001;Name=Cc01_g20340;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Zinc finger protein CONSTANS-LIKE 13,CC_functional_completeness:fragment,CC_gene:COL13,CC_gene:COL15;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015945001~ Putative Zinc finger protein CONSTANS-LIKE 13~ COL13~ fragment;original_location=join(277203..277265%2C277577..277789%2C278316..278593%2C279145..279235);owner=coffea | |
| 27787 chr1 manual_curation exon 36973926 36974947 . - . Parent=GSCOCT00015945001 | |
| 27788 chr1 manual_curation exon 36973402 36973614 . - . Parent=GSCOCT00015945001 | |
| 27789 chr1 manual_curation exon 36972598 36972875 . - . Parent=GSCOCT00015945001 | |
| 27790 chr1 manual_curation exon 36971329 36972046 . - . Parent=GSCOCT00015945001 | |
| 27791 chr1 manual_curation CDS 36973926 36973988 . - 0 Parent=GSCOCT00015945001 | |
| 27792 chr1 manual_curation CDS 36973402 36973614 . - 0 Parent=GSCOCT00015945001 | |
| 27793 chr1 manual_curation CDS 36972598 36972875 . - 0 Parent=GSCOCT00015945001 | |
| 27794 chr1 manual_curation CDS 36971956 36972046 . - 2 Parent=GSCOCT00015945001 | |
| 27795 chr1 manual_curation gene 36977984 36982334 . - . ID=GSCOCG00015944001;Name=Cc01_g20350 | |
| 27796 chr1 manual_curation mRNA 36977984 36982334 . - . ID=GSCOCT00015944001;Parent=GSCOCG00015944001;Name=Cc01_g20350 | |
| 27797 chr1 manual_curation polypeptide 36978244 36982235 . - . ID=GSCOCP00015944001;Dbxref=InterPro:IPR001841,InterPro:IPR008913,InterPro:IPR017921,InterPro:IPR018957,PFAM:PF00097,PFAM:PF05495,PROFILE:PS50089,PROFILE:PS51266,PROFILE:PS51270,SMART:SM00184,SwissProt:O14099,SwissProt:Q96PM5,SwissProt:Q9CR50,TAIR:AT3G62970.1,TAIR:AT5G18650.1,TAIR:AT5G22920.1,TrEMBL:B9I9W3,TrEMBL:D7TP37,TrEMBL:F4IZL5;Derives_from=GSCOCT00015944001;Name=Cc01_g20350;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative RING finger and CHY zinc finger domain-containing protein 1,CC_functional_completeness:complete,CC_gene:Rchy1,CC_gene:RCHY1,CC_gene:SPAC2F3.16;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015944001~ Putative RING finger and CHY zinc finger domain-containing protein 1~ Rchy1~ complete;original_location=join(268956..269086%2C269190..269277%2C269395..269451%2C269550..269582%2C269677..269754%2C269870..269913%2C270069..270109%2C271106..271188%2C271266..271357%2C271514..271583%2C272453..272491%2C272822..272947);owner=coffea | |
| 27798 chr1 manual_curation exon 36982105 36982334 . - . Parent=GSCOCT00015944001 | |
| 27799 chr1 manual_curation exon 36981914 36982001 . - . Parent=GSCOCT00015944001 | |
| 27800 chr1 manual_curation exon 36981740 36981796 . - . Parent=GSCOCT00015944001 | |
| 27801 chr1 manual_curation exon 36981609 36981641 . - . Parent=GSCOCT00015944001 | |
| 27802 chr1 manual_curation exon 36981437 36981514 . - . Parent=GSCOCT00015944001 | |
| 27803 chr1 manual_curation exon 36981278 36981321 . - . Parent=GSCOCT00015944001 | |
| 27804 chr1 manual_curation exon 36981082 36981122 . - . Parent=GSCOCT00015944001 | |
| 27805 chr1 manual_curation exon 36980003 36980085 . - . Parent=GSCOCT00015944001 | |
| 27806 chr1 manual_curation exon 36979834 36979925 . - . Parent=GSCOCT00015944001 | |
| 27807 chr1 manual_curation exon 36979608 36979677 . - . Parent=GSCOCT00015944001 | |
| 27808 chr1 manual_curation exon 36978700 36978738 . - . Parent=GSCOCT00015944001 | |
| 27809 chr1 manual_curation exon 36977984 36978369 . - . Parent=GSCOCT00015944001 | |
| 27810 chr1 manual_curation CDS 36982105 36982235 . - 0 Parent=GSCOCT00015944001 | |
| 27811 chr1 manual_curation CDS 36981914 36982001 . - 2 Parent=GSCOCT00015944001 | |
| 27812 chr1 manual_curation CDS 36981740 36981796 . - 0 Parent=GSCOCT00015944001 | |
| 27813 chr1 manual_curation CDS 36981609 36981641 . - 0 Parent=GSCOCT00015944001 | |
| 27814 chr1 manual_curation CDS 36981437 36981514 . - 0 Parent=GSCOCT00015944001 | |
| 27815 chr1 manual_curation CDS 36981278 36981321 . - 0 Parent=GSCOCT00015944001 | |
| 27816 chr1 manual_curation CDS 36981082 36981122 . - 2 Parent=GSCOCT00015944001 | |
| 27817 chr1 manual_curation CDS 36980003 36980085 . - 1 Parent=GSCOCT00015944001 | |
| 27818 chr1 manual_curation CDS 36979834 36979925 . - 0 Parent=GSCOCT00015944001 | |
| 27819 chr1 manual_curation CDS 36979608 36979677 . - 2 Parent=GSCOCT00015944001 | |
| 27820 chr1 manual_curation CDS 36978700 36978738 . - 0 Parent=GSCOCT00015944001 | |
| 27821 chr1 manual_curation CDS 36978244 36978369 . - 0 Parent=GSCOCT00015944001 | |
| 27822 chr1 manual_curation gene 36985547 36988833 . - . ID=GSCOCG00015943001;Name=Cc01_g20360 | |
| 27823 chr1 manual_curation mRNA 36985547 36988833 . - . ID=GSCOCT00015943001;Parent=GSCOCG00015943001;Name=Cc01_g20360 | |
| 27824 chr1 manual_curation polypeptide 36985915 36987787 . - . ID=GSCOCP00015943001;Dbxref=InterPro:IPR000626,InterPro:IPR017000,InterPro:IPR019955,PFAM:PF00240,PIR:PIRSF032572,PROFILE:PS50053,SwissProt:Q6Z8K4,SwissProt:Q8GWJ6,SwissProt:Q9LSD8,TAIR:AT1G22050.1,TAIR:AT3G26980.1,TAIR:AT4G24990.1,TrEMBL:D7TP35,TrEMBL:E9NZT7,TrEMBL:Q0DXJ1;Derives_from=GSCOCT00015943001;Name=Cc01_g20360;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Membrane-anchored ubiquitin-fold protein 3,CC_functional_completeness:complete,CC_gene:MUB3,CC_gene:MUB6,CC_gene:MUB4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015943001~ Membrane-anchored ubiquitin-fold protein 3~ MUB3~ complete;original_location=join(263404..263536%2C264582..264752%2C265230..265276);owner=coffea | |
| 27825 chr1 manual_curation exon 36987655 36988833 . - . Parent=GSCOCT00015943001 | |
| 27826 chr1 manual_curation exon 36986439 36986609 . - . Parent=GSCOCT00015943001 | |
| 27827 chr1 manual_curation exon 36985547 36985961 . - . Parent=GSCOCT00015943001 | |
| 27828 chr1 manual_curation CDS 36987655 36987787 . - 0 Parent=GSCOCT00015943001 | |
| 27829 chr1 manual_curation CDS 36986439 36986609 . - 1 Parent=GSCOCT00015943001 | |
| 27830 chr1 manual_curation CDS 36985915 36985961 . - 1 Parent=GSCOCT00015943001 | |
| 27831 chr1 manual_curation gene 36994215 36995142 . - . ID=GSCOCG00015941001;Name=Cc01_g20370 | |
| 27832 chr1 manual_curation mRNA 36994215 36995142 . - . ID=GSCOCT00015941001;Parent=GSCOCG00015941001;Name=Cc01_g20370 | |
| 27833 chr1 manual_curation polypeptide 36994591 36994896 . - . ID=GSCOCP00015941001;Dbxref=GENE3D:G3DSA:3.40.30.10,InterPro:IPR002109,InterPro:IPR011905,InterPro:IPR012335,InterPro:IPR012336,PFAM:PF00462,PROFILE:PS51354,SUPERFAMILY:SSF52833,SwissProt:O04341,SwissProt:O82255,SwissProt:Q9M9Y9,TAIR:AT1G06830.1,TAIR:AT2G30540.1,TAIR:AT2G47880.1,TIGRFAMs:TIGR02189,TrEMBL:C6SW47,TrEMBL:F6HQ12,TrEMBL:H6VUU0;Derives_from=GSCOCT00015941001;Name=Cc01_g20370;Ontology_term=CC_evidence_code:ISS,GO:0009055,GO:0015035,GO:0045454,CC_EC_number:missing_EC_number,PRODUCT:Glutaredoxin-C13,CC_functional_completeness:complete,CC_gene:GRXC13,CC_gene:GRXS9,CC_gene:GRXS11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015941001~ Glutaredoxin-C13~ GRXC13~ complete;original_location=256295..256600;owner=coffea | |
| 27834 chr1 manual_curation exon 36994215 36995142 . - . Parent=GSCOCT00015941001 | |
| 27835 chr1 manual_curation CDS 36994591 36994896 . - 0 Parent=GSCOCT00015941001 | |
| 27836 chr1 manual_curation gene 36996944 36997496 . - . ID=GSCOCG00015940001;Name=Cc01_g20380 | |
| 27837 chr1 manual_curation mRNA 36996944 36997496 . - . ID=GSCOCT00015940001;Parent=GSCOCG00015940001;Name=Cc01_g20380 | |
| 27838 chr1 manual_curation polypeptide 36996944 36997252 . - . ID=GSCOCP00015940001;Dbxref=GENE3D:G3DSA:3.40.30.10,InterPro:IPR002109,InterPro:IPR011905,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR014025,PFAM:PF00462,PRINTS:PR00160,PROFILE:PS51354,SUPERFAMILY:SSF52833,SwissProt:O82254,SwissProt:Q9LIF1,SwissProt:Q9LYC6,TAIR:AT2G47870.1,TAIR:AT3G21460.1,TAIR:AT3G62950.1,TIGRFAMs:TIGR02189,TrEMBL:B7FMA1,TrEMBL:B9S3V6,TrEMBL:E9NZT9;Derives_from=GSCOCT00015940001;Name=Cc01_g20380;Ontology_term=CC_evidence_code:ISS,GO:0009055,GO:0015035,GO:0045454,CC_EC_number:missing_EC_number,PRODUCT:Glutaredoxin-C11,CC_functional_completeness:complete,CC_gene:GRXC11,CC_gene:GRXC12,CC_gene:GRXS10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015940001~ Glutaredoxin-C11~ GRXC11~ complete;original_location=253939..254247;owner=coffea | |
| 27839 chr1 manual_curation exon 36996944 36997496 . - . Parent=GSCOCT00015940001 | |
| 27840 chr1 manual_curation CDS 36996944 36997252 . - 0 Parent=GSCOCT00015940001 | |
| 27841 chr1 manual_curation gene 37012341 37012649 . + . ID=GSCOCG00015939001;Name=Cc01_g20390 | |
| 27842 chr1 manual_curation mRNA 37012341 37012649 . + . ID=GSCOCT00015939001;Parent=GSCOCG00015939001;Name=Cc01_g20390 | |
| 27843 chr1 manual_curation polypeptide 37012341 37012649 . + . ID=GSCOCP00015939001;Dbxref=GENE3D:G3DSA:3.40.30.10,InterPro:IPR002109,InterPro:IPR011905,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR014025,PFAM:PF00462,PRINTS:PR00160,PROFILE:PS51354,SUPERFAMILY:SSF52833,SwissProt:Q8L8Z8,SwissProt:Q9LYC8,SwissProt:Q9SA68,TAIR:AT1G03020.1,TAIR:AT3G62930.1,TAIR:AT5G18600.1,TIGRFAMs:TIGR02189,TrEMBL:B9I9V6,TrEMBL:B9I9V7,TrEMBL:B9I9V9;Derives_from=GSCOCT00015939001;Name=Cc01_g20390;Ontology_term=CC_evidence_code:ISS,GO:0009055,GO:0015035,GO:0045454,CC_EC_number:missing_EC_number,PRODUCT:Monothiol glutaredoxin-S2,CC_functional_completeness:complete,CC_gene:GRXS2,CC_gene:GRXS1,CC_gene:GRXS6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015939001~ Monothiol glutaredoxin-S2~ GRXS2~ complete;original_location=complement(238542..238850);owner=coffea | |
| 27844 chr1 manual_curation exon 37012341 37012649 . + . Parent=GSCOCT00015939001 | |
| 27845 chr1 manual_curation CDS 37012341 37012649 . + 0 Parent=GSCOCT00015939001 | |
| 27846 chr1 manual_curation gene 37015050 37016863 . + . ID=GSCOCG00015938001;Name=Cc01_g20400 | |
| 27847 chr1 manual_curation mRNA 37015050 37016863 . + . ID=GSCOCT00015938001;Parent=GSCOCG00015938001;Name=Cc01_g20400 | |
| 27848 chr1 manual_curation polypeptide 37015331 37016473 . + . ID=GSCOCP00015938001;Dbxref=GENE3D:G3DSA:1.10.287.110,InterPro:IPR001623,InterPro:IPR018253,PFAM:PF00226,PROFILE:PS50076,PROSITE:PS00636,SMART:SM00271,SUPERFAMILY:SSF46565,SwissProt:Q45552,SwissProt:Q5KWZ8,SwissProt:Q75VW3,TAIR:AT1G80030.1,TAIR:AT3G17830.1,TAIR:AT4G09350.1,TrEMBL:A5CA95,TrEMBL:B9MWB6,TrEMBL:D7LX90;Derives_from=GSCOCT00015938001;Name=Cc01_g20400;Ontology_term=CC_evidence_code:ISS,GO:0031072,CC_EC_number:missing_EC_number,PRODUCT:Chaperone DnaJ-domain superfamily protein,CC_functional_completeness:complete,CC_gene:dnaJ;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015938001~ Chaperone DnaJ-domain superfamily protein~ dnaJ~ complete;original_location=complement(join(235508..235860%2C234718..235135));owner=coffea | |
| 27849 chr1 manual_curation exon 37016056 37016863 . + . Parent=GSCOCT00015938001 | |
| 27850 chr1 manual_curation exon 37015050 37015683 . + . Parent=GSCOCT00015938001 | |
| 27851 chr1 manual_curation CDS 37016056 37016473 . + 2 Parent=GSCOCT00015938001 | |
| 27852 chr1 manual_curation CDS 37015331 37015683 . + 0 Parent=GSCOCT00015938001 | |
| 27853 chr1 manual_curation gene 37016979 37018795 . - . ID=GSCOCG00015937001;Name=Cc01_g20410 | |
| 27854 chr1 manual_curation mRNA 37016979 37018795 . - . ID=GSCOCT00015937001;Parent=GSCOCG00015937001;Name=Cc01_g20410 | |
| 27855 chr1 manual_curation polypeptide 37016979 37018655 . - . ID=GSCOCP00015937001;Dbxref=TAIR:AT3G62920.1,TrEMBL:B9S3V1,TrEMBL:D7TP33,TrEMBL:G7KRS4;Derives_from=GSCOCT00015937001;Name=Cc01_g20410;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B Has 25 Blast hits to 25 proteins in 11 species,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015937001~ unknown protein%3B Has 25 Blast hits to 25 proteins in 11 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 25%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(232536..232591%2C234020..234212);owner=coffea | |
| 27856 chr1 manual_curation exon 37018600 37018795 . - . Parent=GSCOCT00015937001 | |
| 27857 chr1 manual_curation exon 37016979 37017171 . - . Parent=GSCOCT00015937001 | |
| 27858 chr1 manual_curation CDS 37018600 37018655 . - 0 Parent=GSCOCT00015937001 | |
| 27859 chr1 manual_curation CDS 37016979 37017171 . - 2 Parent=GSCOCT00015937001 | |
| 27860 chr1 manual_curation gene 37019018 37022913 . - . ID=GSCOCG00015936001;Name=Cc01_g20420 | |
| 27861 chr1 manual_curation mRNA 37019018 37022913 . - . ID=GSCOCT00015936001;Parent=GSCOCG00015936001;Name=Cc01_g20420 | |
| 27862 chr1 manual_curation polypeptide 37019296 37022913 . - . ID=GSCOCP00015936001;Dbxref=GENE3D:G3DSA:3.30.710.10,InterPro:IPR000210,InterPro:IPR004249,InterPro:IPR011333,InterPro:IPR013069,PFAM:PF00651,PFAM:PF03000,PROFILE:PS50097,SUPERFAMILY:SSF54695,SwissProt:O82253,SwissProt:Q9FKB6,SwissProt:Q9SA69,TAIR:AT1G03010.1,TAIR:AT2G47860.3,TAIR:AT5G48800.1,TrEMBL:B9I9V4,TrEMBL:B9IBI9,TrEMBL:D7TP32;Derives_from=GSCOCT00015936001;Name=Cc01_g20420;Ontology_term=CC_evidence_code:ISS,GO:0004871,GO:0005515,GO:0009416,CC_EC_number:missing_EC_number,PRODUCT:BTB/POZ domain-containing protein At1g03010,CC_functional_completeness:complete,CC_gene:At1g03010,CC_gene:SETH6,CC_gene:At5g48800;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015936001~ BTB/POZ domain-containing protein At1g03010~ At1g03010~ complete;original_location=join(228278..228369%2C229757..229823%2C230027..231223%2C231353..231895);owner=coffea | |
| 27863 chr1 manual_curation exon 37022822 37022913 . - . Parent=GSCOCT00015936001 | |
| 27864 chr1 manual_curation exon 37021368 37021434 . - . Parent=GSCOCT00015936001 | |
| 27865 chr1 manual_curation exon 37019968 37021164 . - . Parent=GSCOCT00015936001 | |
| 27866 chr1 manual_curation exon 37019018 37019838 . - . Parent=GSCOCT00015936001 | |
| 27867 chr1 manual_curation CDS 37022822 37022913 . - 0 Parent=GSCOCT00015936001 | |
| 27868 chr1 manual_curation CDS 37021368 37021434 . - 2 Parent=GSCOCT00015936001 | |
| 27869 chr1 manual_curation CDS 37019968 37021164 . - 0 Parent=GSCOCT00015936001 | |
| 27870 chr1 manual_curation CDS 37019296 37019838 . - 0 Parent=GSCOCT00015936001 | |
| 27871 chr1 manual_curation gene 37026450 37032420 . - . ID=GSCOCG00015935001;Name=Cc01_g20430 | |
| 27872 chr1 manual_curation mRNA 37026450 37032420 . - . ID=GSCOCT00015935001;Parent=GSCOCG00015935001;Name=Cc01_g20430 | |
| 27873 chr1 manual_curation polypeptide 37026850 37032029 . - . ID=GSCOCP00015935001;Dbxref=InterPro:IPR000571,PFAM:PF00642,PROFILE:PS50103,SMART:SM00356,SwissProt:Q5NAV3,SwissProt:Q5NAW2,SwissProt:Q84W91,TAIR:AT2G47850.1,TAIR:AT3G06410.1,TAIR:AT5G18550.1,TrEMBL:B9S3U9,TrEMBL:D7TP30,TrEMBL:I1JFH1;Derives_from=GSCOCT00015935001;Name=Cc01_g20430;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Zinc finger CCCH domain-containing protein 32,CC_functional_completeness:complete,CC_gene:At2g47850,CC_gene:Os01g0258700,CC_gene:Os01g0257400;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015935001~ Zinc finger CCCH domain-containing protein 32~ At2g47850~ complete;original_location=join(219162..219255%2C219388..219530%2C219785..219850%2C220013..220132%2C220214..220501%2C220588..220890%2C224006..224341);owner=coffea | |
| 27874 chr1 manual_curation exon 37031936 37032420 . - . Parent=GSCOCT00015935001 | |
| 27875 chr1 manual_curation exon 37031661 37031803 . - . Parent=GSCOCT00015935001 | |
| 27876 chr1 manual_curation exon 37031341 37031406 . - . Parent=GSCOCT00015935001 | |
| 27877 chr1 manual_curation exon 37031059 37031178 . - . Parent=GSCOCT00015935001 | |
| 27878 chr1 manual_curation exon 37030690 37030977 . - . Parent=GSCOCT00015935001 | |
| 27879 chr1 manual_curation exon 37030301 37030603 . - . Parent=GSCOCT00015935001 | |
| 27880 chr1 manual_curation exon 37026450 37027185 . - . Parent=GSCOCT00015935001 | |
| 27881 chr1 manual_curation CDS 37031936 37032029 . - 0 Parent=GSCOCT00015935001 | |
| 27882 chr1 manual_curation CDS 37031661 37031803 . - 1 Parent=GSCOCT00015935001 | |
| 27883 chr1 manual_curation CDS 37031341 37031406 . - 0 Parent=GSCOCT00015935001 | |
| 27884 chr1 manual_curation CDS 37031059 37031178 . - 0 Parent=GSCOCT00015935001 | |
| 27885 chr1 manual_curation CDS 37030690 37030977 . - 0 Parent=GSCOCT00015935001 | |
| 27886 chr1 manual_curation CDS 37030301 37030603 . - 0 Parent=GSCOCT00015935001 | |
| 27887 chr1 manual_curation CDS 37026850 37027185 . - 0 Parent=GSCOCT00015935001 | |
| 27888 chr1 manual_curation gene 37036139 37041716 . + . ID=GSCOCG00015934001;Name=Cc01_g20440 | |
| 27889 chr1 manual_curation mRNA 37036139 37041716 . + . ID=GSCOCT00015934001;Parent=GSCOCG00015934001;Name=Cc01_g20440 | |
| 27890 chr1 manual_curation polypeptide 37036357 37041624 . + . ID=GSCOCP00015934001;Dbxref=HAMAP:MF_00093,InterPro:IPR000352,InterPro:IPR004373,InterPro:IPR005139,PFAM:PF00472,PFAM:PF03462,PROSITE:PS00745,SwissProt:B0JYC5,SwissProt:Q110D7,SwissProt:Q8DMG9,TAIR:AT2G47020.1,TAIR:AT3G62910.1,TAIR:AT5G36170.1,TIGRFAMs:TIGR00019,TrEMBL:D7TP29,TrEMBL:I1JQI6,TrEMBL:I1NB26;Derives_from=GSCOCT00015934001;Name=Cc01_g20440;Ontology_term=CC_evidence_code:ISS,GO:0003747,GO:0005737,GO:0006415,CC_EC_number:missing_EC_number,PRODUCT:Peptide chain release factor 1,CC_functional_completeness:complete,CC_gene:prfA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015934001~ Peptide chain release factor 1~ prfA~ complete;original_location=complement(join(214664..214834%2C214305..214361%2C214110..214190%2C213934..213991%2C213722..213825%2C213579..213630%2C213176..213225%2C212498..212563%2C212266..212430%2C211498..211570%2C211270..211402%2C210749..210806%2C210135..210182%2C209759..209842%2C209567..209638));owner=coffea | |
| 27891 chr1 manual_curation exon 37041553 37041716 . + . Parent=GSCOCT00015934001 | |
| 27892 chr1 manual_curation exon 37041349 37041432 . + . Parent=GSCOCT00015934001 | |
| 27893 chr1 manual_curation exon 37041009 37041056 . + . Parent=GSCOCT00015934001 | |
| 27894 chr1 manual_curation exon 37040385 37040442 . + . Parent=GSCOCT00015934001 | |
| 27895 chr1 manual_curation exon 37039789 37039921 . + . Parent=GSCOCT00015934001 | |
| 27896 chr1 manual_curation exon 37039621 37039693 . + . Parent=GSCOCT00015934001 | |
| 27897 chr1 manual_curation exon 37038761 37038925 . + . Parent=GSCOCT00015934001 | |
| 27898 chr1 manual_curation exon 37038628 37038693 . + . Parent=GSCOCT00015934001 | |
| 27899 chr1 manual_curation exon 37037966 37038015 . + . Parent=GSCOCT00015934001 | |
| 27900 chr1 manual_curation exon 37037561 37037612 . + . Parent=GSCOCT00015934001 | |
| 27901 chr1 manual_curation exon 37037366 37037469 . + . Parent=GSCOCT00015934001 | |
| 27902 chr1 manual_curation exon 37037200 37037257 . + . Parent=GSCOCT00015934001 | |
| 27903 chr1 manual_curation exon 37037001 37037081 . + . Parent=GSCOCT00015934001 | |
| 27904 chr1 manual_curation exon 37036830 37036886 . + . Parent=GSCOCT00015934001 | |
| 27905 chr1 manual_curation exon 37036139 37036527 . + . Parent=GSCOCT00015934001 | |
| 27906 chr1 manual_curation CDS 37041553 37041624 . + 0 Parent=GSCOCT00015934001 | |
| 27907 chr1 manual_curation CDS 37041349 37041432 . + 0 Parent=GSCOCT00015934001 | |
| 27908 chr1 manual_curation CDS 37041009 37041056 . + 0 Parent=GSCOCT00015934001 | |
| 27909 chr1 manual_curation CDS 37040385 37040442 . + 2 Parent=GSCOCT00015934001 | |
| 27910 chr1 manual_curation CDS 37039789 37039921 . + 1 Parent=GSCOCT00015934001 | |
| 27911 chr1 manual_curation CDS 37039621 37039693 . + 0 Parent=GSCOCT00015934001 | |
| 27912 chr1 manual_curation CDS 37038761 37038925 . + 0 Parent=GSCOCT00015934001 | |
| 27913 chr1 manual_curation CDS 37038628 37038693 . + 0 Parent=GSCOCT00015934001 | |
| 27914 chr1 manual_curation CDS 37037966 37038015 . + 1 Parent=GSCOCT00015934001 | |
| 27915 chr1 manual_curation CDS 37037561 37037612 . + 0 Parent=GSCOCT00015934001 | |
| 27916 chr1 manual_curation CDS 37037366 37037469 . + 1 Parent=GSCOCT00015934001 | |
| 27917 chr1 manual_curation CDS 37037200 37037257 . + 0 Parent=GSCOCT00015934001 | |
| 27918 chr1 manual_curation CDS 37037001 37037081 . + 0 Parent=GSCOCT00015934001 | |
| 27919 chr1 manual_curation CDS 37036830 37036886 . + 0 Parent=GSCOCT00015934001 | |
| 27920 chr1 manual_curation CDS 37036357 37036527 . + 0 Parent=GSCOCT00015934001 | |
| 27921 chr1 manual_curation gene 37044024 37050476 . + . ID=GSCOCG00015932001;Name=Cc01_g20450 | |
| 27922 chr1 manual_curation mRNA 37044024 37050476 . + . ID=GSCOCT00015932001;Parent=GSCOCG00015932001;Name=Cc01_g20450 | |
| 27923 chr1 manual_curation polypeptide 37044249 37050431 . + . ID=GSCOCP00015932001;Dbxref=GENE3D:G3DSA:3.40.30.10,InterPro:IPR004879,InterPro:IPR008928,InterPro:IPR012335,InterPro:IPR012336,PFAM:PF03190,SUPERFAMILY:SSF48208,SUPERFAMILY:SSF52833,SwissProt:Q6T393,SwissProt:Q80YT5,SwissProt:Q8TB22,TAIR:AT4G03200.1,TrEMBL:B9S3U6,TrEMBL:F6HQ08,TrEMBL:I1NB27;Derives_from=GSCOCT00015932001;Name=Cc01_g20450;Ontology_term=CC_evidence_code:ISS,GO:0003824,CC_EC_number:missing_EC_number,PRODUCT:Putative Spermatogenesis-associated protein 20,CC_functional_completeness:complete,CC_gene:SPATA20,CC_gene:Spata20;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015932001~ Putative Spermatogenesis-associated protein 20~ SPATA20~ complete;original_location=complement(join(206637..206942%2C206334..206406%2C206134..206155%2C205965..206043%2C205807..205839%2C205129..205277%2C204571..204727%2C203899..204139%2C203569..203810%2C202995..203258%2C202797..202907%2C201698..201922%2C201415..201618%2C201099..201275%2C200760..200945));owner=coffea | |
| 27924 chr1 manual_curation exon 37050246 37050476 . + . Parent=GSCOCT00015932001 | |
| 27925 chr1 manual_curation exon 37049916 37050092 . + . Parent=GSCOCT00015932001 | |
| 27926 chr1 manual_curation exon 37049573 37049776 . + . Parent=GSCOCT00015932001 | |
| 27927 chr1 manual_curation exon 37049269 37049493 . + . Parent=GSCOCT00015932001 | |
| 27928 chr1 manual_curation exon 37048284 37048394 . + . Parent=GSCOCT00015932001 | |
| 27929 chr1 manual_curation exon 37047933 37048196 . + . Parent=GSCOCT00015932001 | |
| 27930 chr1 manual_curation exon 37047381 37047622 . + . Parent=GSCOCT00015932001 | |
| 27931 chr1 manual_curation exon 37047052 37047292 . + . Parent=GSCOCT00015932001 | |
| 27932 chr1 manual_curation exon 37046464 37046620 . + . Parent=GSCOCT00015932001 | |
| 27933 chr1 manual_curation exon 37045914 37046062 . + . Parent=GSCOCT00015932001 | |
| 27934 chr1 manual_curation exon 37045352 37045384 . + . Parent=GSCOCT00015932001 | |
| 27935 chr1 manual_curation exon 37045148 37045226 . + . Parent=GSCOCT00015932001 | |
| 27936 chr1 manual_curation exon 37045036 37045057 . + . Parent=GSCOCT00015932001 | |
| 27937 chr1 manual_curation exon 37044785 37044857 . + . Parent=GSCOCT00015932001 | |
| 27938 chr1 manual_curation exon 37044024 37044554 . + . Parent=GSCOCT00015932001 | |
| 27939 chr1 manual_curation CDS 37050246 37050431 . + 0 Parent=GSCOCT00015932001 | |
| 27940 chr1 manual_curation CDS 37049916 37050092 . + 0 Parent=GSCOCT00015932001 | |
| 27941 chr1 manual_curation CDS 37049573 37049776 . + 0 Parent=GSCOCT00015932001 | |
| 27942 chr1 manual_curation CDS 37049269 37049493 . + 0 Parent=GSCOCT00015932001 | |
| 27943 chr1 manual_curation CDS 37048284 37048394 . + 0 Parent=GSCOCT00015932001 | |
| 27944 chr1 manual_curation CDS 37047933 37048196 . + 0 Parent=GSCOCT00015932001 | |
| 27945 chr1 manual_curation CDS 37047381 37047622 . + 1 Parent=GSCOCT00015932001 | |
| 27946 chr1 manual_curation CDS 37047052 37047292 . + 0 Parent=GSCOCT00015932001 | |
| 27947 chr1 manual_curation CDS 37046464 37046620 . + 2 Parent=GSCOCT00015932001 | |
| 27948 chr1 manual_curation CDS 37045914 37046062 . + 0 Parent=GSCOCT00015932001 | |
| 27949 chr1 manual_curation CDS 37045352 37045384 . + 0 Parent=GSCOCT00015932001 | |
| 27950 chr1 manual_curation CDS 37045148 37045226 . + 2 Parent=GSCOCT00015932001 | |
| 27951 chr1 manual_curation CDS 37045036 37045057 . + 1 Parent=GSCOCT00015932001 | |
| 27952 chr1 manual_curation CDS 37044785 37044857 . + 0 Parent=GSCOCT00015932001 | |
| 27953 chr1 manual_curation CDS 37044249 37044554 . + 0 Parent=GSCOCT00015932001 | |
| 27954 chr1 manual_curation gene 37055551 37058268 . + . ID=GSCOCG00015930001;Name=Cc01_g20460 | |
| 27955 chr1 manual_curation mRNA 37055551 37058268 . + . ID=GSCOCT00015930001;Parent=GSCOCG00015930001;Name=Cc01_g20460 | |
| 27956 chr1 manual_curation polypeptide 37055816 37057987 . + . ID=GSCOCP00015930001;Dbxref=InterPro:IPR002085,InterPro:IPR002328,InterPro:IPR011032,InterPro:IPR013149,InterPro:IPR013154,InterPro:IPR020843,PANTHER:PTHR11695,PFAM:PF00107,PFAM:PF08240,PROSITE:PS00059,SMART:SM00829,SUPERFAMILY:SSF50129,SwissProt:Q1PSI9,SwissProt:Q58D31,SwissProt:Q64442,TAIR:AT1G77120.1,TAIR:AT5G51970.1,TAIR:AT5G63620.1,TrEMBL:B9I4E5,TrEMBL:C6TD70,TrEMBL:I1MQ30;Derives_from=GSCOCT00015930001;Name=Cc01_g20460;Ontology_term=CC_evidence_code:ISS,GO:0008270,GO:0016491,GO:0055114,CC_EC_number:1.1.1.14,PRODUCT:L-idonate 5-dehydrogenase,CC_functional_completeness:complete,CC_gene:VIT_16s0100g00290,CC_gene:SORD,CC_gene:Sord;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015930001~ L-idonate 5-dehydrogenase~ VIT_16s0100g00290~ complete;original_location=complement(join(195258..195375%2C195014..195081%2C194275..194511%2C193489..193967%2C193204..193396));owner=coffea | |
| 27957 chr1 manual_curation exon 37057795 37058268 . + . Parent=GSCOCT00015930001 | |
| 27958 chr1 manual_curation exon 37057224 37057702 . + . Parent=GSCOCT00015930001 | |
| 27959 chr1 manual_curation exon 37056680 37056916 . + . Parent=GSCOCT00015930001 | |
| 27960 chr1 manual_curation exon 37056110 37056177 . + . Parent=GSCOCT00015930001 | |
| 27961 chr1 manual_curation exon 37055551 37055933 . + . Parent=GSCOCT00015930001 | |
| 27962 chr1 manual_curation CDS 37057795 37057987 . + 2 Parent=GSCOCT00015930001 | |
| 27963 chr1 manual_curation CDS 37057224 37057702 . + 0 Parent=GSCOCT00015930001 | |
| 27964 chr1 manual_curation CDS 37056680 37056916 . + 0 Parent=GSCOCT00015930001 | |
| 27965 chr1 manual_curation CDS 37056110 37056177 . + 1 Parent=GSCOCT00015930001 | |
| 27966 chr1 manual_curation CDS 37055816 37055933 . + 0 Parent=GSCOCT00015930001 | |
| 27967 chr1 manual_curation gene 37058665 37061238 . - . ID=GSCOCG00015929001;Name=Cc01_g20470 | |
| 27968 chr1 manual_curation mRNA 37058665 37061238 . - . ID=GSCOCT00015929001;Parent=GSCOCG00015929001;Name=Cc01_g20470 | |
| 27969 chr1 manual_curation polypeptide 37059618 37059887 . - . ID=GSCOCP00015929001;Derives_from=GSCOCT00015929001;Name=Cc01_g20470;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015929001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=191304..191573;owner=coffea | |
| 27970 chr1 manual_curation exon 37061112 37061238 . - . Parent=GSCOCT00015929001 | |
| 27971 chr1 manual_curation exon 37058665 37060058 . - . Parent=GSCOCT00015929001 | |
| 27972 chr1 manual_curation CDS 37059618 37059887 . - 0 Parent=GSCOCT00015929001 | |
| 27973 chr1 manual_curation gene 37062333 37069033 . + . ID=GSCOCG00015928001;Name=Cc01_g20480 | |
| 27974 chr1 manual_curation mRNA 37062333 37069033 . + . ID=GSCOCT00015928001;Parent=GSCOCG00015928001;Name=Cc01_g20480 | |
| 27975 chr1 manual_curation polypeptide 37062516 37068630 . + . ID=GSCOCP00015928001;Dbxref=InterPro:IPR003593,InterPro:IPR003959,InterPro:IPR003960,PFAM:PF00004,PROSITE:PS00674,SMART:SM00382,SwissProt:P36966,SwissProt:Q54CS8,SwissProt:Q8RY16,TAIR:AT1G03000.1,TAIR:AT3G53230.1,TAIR:AT5G03340.1,TrEMBL:B9I9U9,TrEMBL:B9S3U3,TrEMBL:D7TP18;Derives_from=GSCOCT00015928001;Name=Cc01_g20480;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0017111,CC_EC_number:3.6.4.3,PRODUCT:Peroxisome biogenesis protein 6,CC_functional_completeness:complete,CC_gene:PEX6,CC_gene:pex6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015928001~ Peroxisome biogenesis protein 6~ PEX6~ complete;original_location=complement(join(188370..188675%2C187431..188066%2C187111..187354%2C186771..186912%2C186410..186590%2C185457..185642%2C185003..185269%2C184699..184770%2C184209..184295%2C184009..184131%2C183807..183917%2C183682..183720%2C183441..183562%2C183204..183348%2C182931..183011%2C182561..182650));owner=coffea | |
| 27976 chr1 manual_curation exon 37068541 37069033 . + . Parent=GSCOCT00015928001 | |
| 27977 chr1 manual_curation exon 37068180 37068260 . + . Parent=GSCOCT00015928001 | |
| 27978 chr1 manual_curation exon 37067843 37067987 . + . Parent=GSCOCT00015928001 | |
| 27979 chr1 manual_curation exon 37067629 37067750 . + . Parent=GSCOCT00015928001 | |
| 27980 chr1 manual_curation exon 37067471 37067509 . + . Parent=GSCOCT00015928001 | |
| 27981 chr1 manual_curation exon 37067274 37067384 . + . Parent=GSCOCT00015928001 | |
| 27982 chr1 manual_curation exon 37067060 37067182 . + . Parent=GSCOCT00015928001 | |
| 27983 chr1 manual_curation exon 37066896 37066982 . + . Parent=GSCOCT00015928001 | |
| 27984 chr1 manual_curation exon 37066421 37066492 . + . Parent=GSCOCT00015928001 | |
| 27985 chr1 manual_curation exon 37065922 37066188 . + . Parent=GSCOCT00015928001 | |
| 27986 chr1 manual_curation exon 37065549 37065734 . + . Parent=GSCOCT00015928001 | |
| 27987 chr1 manual_curation exon 37064601 37064781 . + . Parent=GSCOCT00015928001 | |
| 27988 chr1 manual_curation exon 37064279 37064420 . + . Parent=GSCOCT00015928001 | |
| 27989 chr1 manual_curation exon 37063837 37064080 . + . Parent=GSCOCT00015928001 | |
| 27990 chr1 manual_curation exon 37063125 37063760 . + . Parent=GSCOCT00015928001 | |
| 27991 chr1 manual_curation exon 37062333 37062821 . + . Parent=GSCOCT00015928001 | |
| 27992 chr1 manual_curation CDS 37068541 37068630 . + 0 Parent=GSCOCT00015928001 | |
| 27993 chr1 manual_curation CDS 37068180 37068260 . + 0 Parent=GSCOCT00015928001 | |
| 27994 chr1 manual_curation CDS 37067843 37067987 . + 2 Parent=GSCOCT00015928001 | |
| 27995 chr1 manual_curation CDS 37067629 37067750 . + 0 Parent=GSCOCT00015928001 | |
| 27996 chr1 manual_curation CDS 37067471 37067509 . + 0 Parent=GSCOCT00015928001 | |
| 27997 chr1 manual_curation CDS 37067274 37067384 . + 0 Parent=GSCOCT00015928001 | |
| 27998 chr1 manual_curation CDS 37067060 37067182 . + 0 Parent=GSCOCT00015928001 | |
| 27999 chr1 manual_curation CDS 37066896 37066982 . + 0 Parent=GSCOCT00015928001 | |
| 28000 chr1 manual_curation CDS 37066421 37066492 . + 0 Parent=GSCOCT00015928001 | |
| 28001 chr1 manual_curation CDS 37065922 37066188 . + 0 Parent=GSCOCT00015928001 | |
| 28002 chr1 manual_curation CDS 37065549 37065734 . + 0 Parent=GSCOCT00015928001 | |
| 28003 chr1 manual_curation CDS 37064601 37064781 . + 2 Parent=GSCOCT00015928001 | |
| 28004 chr1 manual_curation CDS 37064279 37064420 . + 1 Parent=GSCOCT00015928001 | |
| 28005 chr1 manual_curation CDS 37063837 37064080 . + 0 Parent=GSCOCT00015928001 | |
| 28006 chr1 manual_curation CDS 37063125 37063760 . + 0 Parent=GSCOCT00015928001 | |
| 28007 chr1 manual_curation CDS 37062516 37062821 . + 0 Parent=GSCOCT00015928001 | |
| 28008 chr1 manual_curation gene 37076377 37085560 . + . ID=GSCOCG00015927001;Name=Cc01_g20490 | |
| 28009 chr1 manual_curation mRNA 37076377 37085560 . + . ID=GSCOCT00015927001;Parent=GSCOCG00015927001;Name=Cc01_g20490 | |
| 28010 chr1 manual_curation polypeptide 37076857 37085560 . + . ID=GSCOCP00015927001;Dbxref=InterPro:IPR011124,PFAM:PF07496,PROFILE:PS51050,TAIR:AT1G02990.3,TAIR:AT3G62900.1,TAIR:AT4G15730.1,TrEMBL:A5BJN7,TrEMBL:B9S3U2,TrEMBL:F6HPZ9;Derives_from=GSCOCT00015927001;Name=Cc01_g20490;Ontology_term=CC_evidence_code:ISS,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015927001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=complement(join(174194..174334%2C173375..173447%2C173168..173298%2C172692..173081%2C171245..172590%2C170419..170885%2C168505..170333%2C168269..168426%2C167078..167238%2C166628..166788%2C165631..165825));owner=coffea | |
| 28011 chr1 manual_curation exon 37085366 37085560 . + . Parent=GSCOCT00015927001 | |
| 28012 chr1 manual_curation exon 37084403 37084563 . + . Parent=GSCOCT00015927001 | |
| 28013 chr1 manual_curation exon 37083953 37084113 . + . Parent=GSCOCT00015927001 | |
| 28014 chr1 manual_curation exon 37082765 37082922 . + . Parent=GSCOCT00015927001 | |
| 28015 chr1 manual_curation exon 37080858 37082686 . + . Parent=GSCOCT00015927001 | |
| 28016 chr1 manual_curation exon 37080306 37080772 . + . Parent=GSCOCT00015927001 | |
| 28017 chr1 manual_curation exon 37078601 37079946 . + . Parent=GSCOCT00015927001 | |
| 28018 chr1 manual_curation exon 37078110 37078499 . + . Parent=GSCOCT00015927001 | |
| 28019 chr1 manual_curation exon 37077893 37078023 . + . Parent=GSCOCT00015927001 | |
| 28020 chr1 manual_curation exon 37077744 37077816 . + . Parent=GSCOCT00015927001 | |
| 28021 chr1 manual_curation exon 37076377 37076997 . + . Parent=GSCOCT00015927001 | |
| 28022 chr1 manual_curation CDS 37085366 37085560 . + 0 Parent=GSCOCT00015927001 | |
| 28023 chr1 manual_curation CDS 37084403 37084563 . + 1 Parent=GSCOCT00015927001 | |
| 28024 chr1 manual_curation CDS 37083953 37084113 . + 2 Parent=GSCOCT00015927001 | |
| 28025 chr1 manual_curation CDS 37082765 37082922 . + 0 Parent=GSCOCT00015927001 | |
| 28026 chr1 manual_curation CDS 37080858 37082686 . + 1 Parent=GSCOCT00015927001 | |
| 28027 chr1 manual_curation CDS 37080306 37080772 . + 2 Parent=GSCOCT00015927001 | |
| 28028 chr1 manual_curation CDS 37078601 37079946 . + 0 Parent=GSCOCT00015927001 | |
| 28029 chr1 manual_curation CDS 37078110 37078499 . + 0 Parent=GSCOCT00015927001 | |
| 28030 chr1 manual_curation CDS 37077893 37078023 . + 1 Parent=GSCOCT00015927001 | |
| 28031 chr1 manual_curation CDS 37077744 37077816 . + 0 Parent=GSCOCT00015927001 | |
| 28032 chr1 manual_curation CDS 37076857 37076997 . + 0 Parent=GSCOCT00015927001 | |
| 28033 chr1 manual_curation gene 37089747 37098887 . - . ID=GSCOCG00015925001;Name=Cc01_g20500 | |
| 28034 chr1 manual_curation mRNA 37089747 37098887 . - . ID=GSCOCT00015925001;Parent=GSCOCG00015925001;Name=Cc01_g20500 | |
| 28035 chr1 manual_curation polypeptide 37090232 37097779 . - . ID=GSCOCP00015925001;Dbxref=GENE3D:G3DSA:1.10.10.10,InterPro:IPR001373,InterPro:IPR011991,InterPro:IPR016157,InterPro:IPR016158,InterPro:IPR016159,InterPro:IPR019559,PFAM:PF00888,PFAM:PF10557,PROFILE:PS50069,PROSITE:PS01256,SMART:SM00182,SMART:SM00884,SUPERFAMILY:SSF74788,SUPERFAMILY:SSF75632,SwissProt:P0CH31,SwissProt:Q94AH6,SwissProt:Q9SRZ0,TAIR:AT1G02980.1,TAIR:AT1G43140.1,TAIR:AT4G02570.1,TrEMBL:B9RT30,TrEMBL:D7T6D9,TrEMBL:Q711G7;Derives_from=GSCOCT00015925001;Name=Cc01_g20500;Ontology_term=CC_evidence_code:ISS,GO:0006511,GO:0031461,GO:0031625,CC_EC_number:missing_EC_number,PRODUCT:Cullin-1,CC_functional_completeness:complete,CC_gene:CUL1,CC_gene:CUL2,CC_gene:At1g43140;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015925001~ Cullin-1~ CUL1~ complete;original_location=join(153412..153551%2C153746..153845%2C154699..154884%2C155012..155047%2C155140..155347%2C155457..155527%2C156667..156756%2C156849..156929%2C157059..157118%2C157792..157821%2C157905..157991%2C158071..158220%2C158312..158367%2C158521..158641%2C158729..158827%2C159027..159170%2C159257..159475%2C159577..159744%2C160858..160959);owner=coffea | |
| 28036 chr1 manual_curation exon 37098540 37098887 . - . Parent=GSCOCT00015925001 | |
| 28037 chr1 manual_curation exon 37097640 37097805 . - . Parent=GSCOCT00015925001 | |
| 28038 chr1 manual_curation exon 37097346 37097445 . - . Parent=GSCOCT00015925001 | |
| 28039 chr1 manual_curation exon 37096307 37096492 . - . Parent=GSCOCT00015925001 | |
| 28040 chr1 manual_curation exon 37096144 37096179 . - . Parent=GSCOCT00015925001 | |
| 28041 chr1 manual_curation exon 37095844 37096051 . - . Parent=GSCOCT00015925001 | |
| 28042 chr1 manual_curation exon 37095664 37095734 . - . Parent=GSCOCT00015925001 | |
| 28043 chr1 manual_curation exon 37094435 37094524 . - . Parent=GSCOCT00015925001 | |
| 28044 chr1 manual_curation exon 37094262 37094342 . - . Parent=GSCOCT00015925001 | |
| 28045 chr1 manual_curation exon 37094073 37094132 . - . Parent=GSCOCT00015925001 | |
| 28046 chr1 manual_curation exon 37093370 37093399 . - . Parent=GSCOCT00015925001 | |
| 28047 chr1 manual_curation exon 37093200 37093286 . - . Parent=GSCOCT00015925001 | |
| 28048 chr1 manual_curation exon 37092971 37093120 . - . Parent=GSCOCT00015925001 | |
| 28049 chr1 manual_curation exon 37092824 37092879 . - . Parent=GSCOCT00015925001 | |
| 28050 chr1 manual_curation exon 37092550 37092670 . - . Parent=GSCOCT00015925001 | |
| 28051 chr1 manual_curation exon 37092364 37092462 . - . Parent=GSCOCT00015925001 | |
| 28052 chr1 manual_curation exon 37092021 37092164 . - . Parent=GSCOCT00015925001 | |
| 28053 chr1 manual_curation exon 37091716 37091934 . - . Parent=GSCOCT00015925001 | |
| 28054 chr1 manual_curation exon 37091447 37091614 . - . Parent=GSCOCT00015925001 | |
| 28055 chr1 manual_curation exon 37089747 37090333 . - . Parent=GSCOCT00015925001 | |
| 28056 chr1 manual_curation CDS 37097640 37097779 . - 0 Parent=GSCOCT00015925001 | |
| 28057 chr1 manual_curation CDS 37097346 37097445 . - 2 Parent=GSCOCT00015925001 | |
| 28058 chr1 manual_curation CDS 37096307 37096492 . - 0 Parent=GSCOCT00015925001 | |
| 28059 chr1 manual_curation CDS 37096144 37096179 . - 0 Parent=GSCOCT00015925001 | |
| 28060 chr1 manual_curation CDS 37095844 37096051 . - 0 Parent=GSCOCT00015925001 | |
| 28061 chr1 manual_curation CDS 37095664 37095734 . - 1 Parent=GSCOCT00015925001 | |
| 28062 chr1 manual_curation CDS 37094435 37094524 . - 0 Parent=GSCOCT00015925001 | |
| 28063 chr1 manual_curation CDS 37094262 37094342 . - 0 Parent=GSCOCT00015925001 | |
| 28064 chr1 manual_curation CDS 37094073 37094132 . - 0 Parent=GSCOCT00015925001 | |
| 28065 chr1 manual_curation CDS 37093370 37093399 . - 0 Parent=GSCOCT00015925001 | |
| 28066 chr1 manual_curation CDS 37093200 37093286 . - 0 Parent=GSCOCT00015925001 | |
| 28067 chr1 manual_curation CDS 37092971 37093120 . - 0 Parent=GSCOCT00015925001 | |
| 28068 chr1 manual_curation CDS 37092824 37092879 . - 0 Parent=GSCOCT00015925001 | |
| 28069 chr1 manual_curation CDS 37092550 37092670 . - 2 Parent=GSCOCT00015925001 | |
| 28070 chr1 manual_curation CDS 37092364 37092462 . - 0 Parent=GSCOCT00015925001 | |
| 28071 chr1 manual_curation CDS 37092021 37092164 . - 0 Parent=GSCOCT00015925001 | |
| 28072 chr1 manual_curation CDS 37091716 37091934 . - 0 Parent=GSCOCT00015925001 | |
| 28073 chr1 manual_curation CDS 37091447 37091614 . - 0 Parent=GSCOCT00015925001 | |
| 28074 chr1 manual_curation CDS 37090232 37090333 . - 0 Parent=GSCOCT00015925001 | |
| 28075 chr1 manual_curation gene 37104888 37114557 . + . ID=GSCOCG00015924001;Name=Cc01_g20510 | |
| 28076 chr1 manual_curation mRNA 37104888 37114557 . + . ID=GSCOCT00015924001;Parent=GSCOCG00015924001;Name=Cc01_g20510 | |
| 28077 chr1 manual_curation polypeptide 37104969 37114228 . + . ID=GSCOCP00015924001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001356,InterPro:IPR009057,InterPro:IPR012287,PROFILE:PS50071,SMART:SM00389,SUPERFAMILY:SSF46689,SwissProt:Q38796,TAIR:AT4G02560.1,TrEMBL:B9IBI0,TrEMBL:B9S3T8,TrEMBL:F6HQ00;Derives_from=GSCOCT00015924001;Name=Cc01_g20510;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,GO:0043565,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:LD;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015924001~ Putative uncharacterized protein~ LD~ complete;original_location=complement(join(146043..146222%2C145083..145110%2C144656..144786%2C143778..144127%2C143574..143667%2C143390..143483%2C142658..142787%2C142515..142566%2C142389..142432%2C142210..142295%2C141452..141886%2C138531..139072%2C136963..137934));owner=coffea | |
| 28078 chr1 manual_curation exon 37113257 37114557 . + . Parent=GSCOCT00015924001 | |
| 28079 chr1 manual_curation exon 37112119 37112660 . + . Parent=GSCOCT00015924001 | |
| 28080 chr1 manual_curation exon 37109305 37109739 . + . Parent=GSCOCT00015924001 | |
| 28081 chr1 manual_curation exon 37108896 37108981 . + . Parent=GSCOCT00015924001 | |
| 28082 chr1 manual_curation exon 37108759 37108802 . + . Parent=GSCOCT00015924001 | |
| 28083 chr1 manual_curation exon 37108625 37108676 . + . Parent=GSCOCT00015924001 | |
| 28084 chr1 manual_curation exon 37108404 37108533 . + . Parent=GSCOCT00015924001 | |
| 28085 chr1 manual_curation exon 37107708 37107801 . + . Parent=GSCOCT00015924001 | |
| 28086 chr1 manual_curation exon 37107524 37107617 . + . Parent=GSCOCT00015924001 | |
| 28087 chr1 manual_curation exon 37107064 37107413 . + . Parent=GSCOCT00015924001 | |
| 28088 chr1 manual_curation exon 37106405 37106535 . + . Parent=GSCOCT00015924001 | |
| 28089 chr1 manual_curation exon 37106081 37106108 . + . Parent=GSCOCT00015924001 | |
| 28090 chr1 manual_curation exon 37104888 37105148 . + . Parent=GSCOCT00015924001 | |
| 28091 chr1 manual_curation CDS 37113257 37114228 . + 0 Parent=GSCOCT00015924001 | |
| 28092 chr1 manual_curation CDS 37112119 37112660 . + 1 Parent=GSCOCT00015924001 | |
| 28093 chr1 manual_curation CDS 37109305 37109739 . + 1 Parent=GSCOCT00015924001 | |
| 28094 chr1 manual_curation CDS 37108896 37108981 . + 2 Parent=GSCOCT00015924001 | |
| 28095 chr1 manual_curation CDS 37108759 37108802 . + 0 Parent=GSCOCT00015924001 | |
| 28096 chr1 manual_curation CDS 37108625 37108676 . + 2 Parent=GSCOCT00015924001 | |
| 28097 chr1 manual_curation CDS 37108404 37108533 . + 1 Parent=GSCOCT00015924001 | |
| 28098 chr1 manual_curation CDS 37107708 37107801 . + 0 Parent=GSCOCT00015924001 | |
| 28099 chr1 manual_curation CDS 37107524 37107617 . + 2 Parent=GSCOCT00015924001 | |
| 28100 chr1 manual_curation CDS 37107064 37107413 . + 0 Parent=GSCOCT00015924001 | |
| 28101 chr1 manual_curation CDS 37106405 37106535 . + 1 Parent=GSCOCT00015924001 | |
| 28102 chr1 manual_curation CDS 37106081 37106108 . + 0 Parent=GSCOCT00015924001 | |
| 28103 chr1 manual_curation CDS 37104969 37105148 . + 0 Parent=GSCOCT00015924001 | |
| 28104 chr1 manual_curation gene 37116387 37122943 . + . ID=GSCOCG00015923001;Name=Cc01_g20520 | |
| 28105 chr1 manual_curation mRNA 37116387 37122943 . + . ID=GSCOCT00015923001;Parent=GSCOCG00015923001;Name=Cc01_g20520 | |
| 28106 chr1 manual_curation polypeptide 37116631 37122649 . + . ID=GSCOCP00015923001;Dbxref=InterPro:IPR002524,PANTHER:PTHR11562,PFAM:PF01545,SwissProt:Q08970,SwissProt:Q10LJ2,SwissProt:Q8L725,TAIR:AT2G47830.1,TIGRFAMs:TIGR01297,TrEMBL:B9IBH9,TrEMBL:F6HQ01,TrEMBL:I1L7X1;Derives_from=GSCOCT00015923001;Name=Cc01_g20520;Ontology_term=CC_evidence_code:ISS,GO:0006812,GO:0008324,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Metal tolerance protein C1,CC_functional_completeness:complete,CC_gene:MTPC1,CC_gene:MTP2,CC_gene:MMT2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015923001~ Metal tolerance protein C1~ MTPC1~ complete;original_location=complement(join(134171..134560%2C133993..134062%2C133458..133555%2C133113..133267%2C132584..132699%2C132354..132450%2C131343..131427%2C130375..130437%2C130148..130253%2C129244..129383%2C128829..128920%2C128542..128701));owner=coffea | |
| 28107 chr1 manual_curation exon 37122490 37122943 . + . Parent=GSCOCT00015923001 | |
| 28108 chr1 manual_curation exon 37122271 37122362 . + . Parent=GSCOCT00015923001 | |
| 28109 chr1 manual_curation exon 37121808 37121947 . + . Parent=GSCOCT00015923001 | |
| 28110 chr1 manual_curation exon 37120938 37121043 . + . Parent=GSCOCT00015923001 | |
| 28111 chr1 manual_curation exon 37120754 37120816 . + . Parent=GSCOCT00015923001 | |
| 28112 chr1 manual_curation exon 37119764 37119848 . + . Parent=GSCOCT00015923001 | |
| 28113 chr1 manual_curation exon 37118741 37118837 . + . Parent=GSCOCT00015923001 | |
| 28114 chr1 manual_curation exon 37118492 37118607 . + . Parent=GSCOCT00015923001 | |
| 28115 chr1 manual_curation exon 37117924 37118078 . + . Parent=GSCOCT00015923001 | |
| 28116 chr1 manual_curation exon 37117636 37117733 . + . Parent=GSCOCT00015923001 | |
| 28117 chr1 manual_curation exon 37117129 37117198 . + . Parent=GSCOCT00015923001 | |
| 28118 chr1 manual_curation exon 37116387 37117020 . + . Parent=GSCOCT00015923001 | |
| 28119 chr1 manual_curation CDS 37122490 37122649 . + 2 Parent=GSCOCT00015923001 | |
| 28120 chr1 manual_curation CDS 37122271 37122362 . + 0 Parent=GSCOCT00015923001 | |
| 28121 chr1 manual_curation CDS 37121808 37121947 . + 1 Parent=GSCOCT00015923001 | |
| 28122 chr1 manual_curation CDS 37120938 37121043 . + 0 Parent=GSCOCT00015923001 | |
| 28123 chr1 manual_curation CDS 37120754 37120816 . + 0 Parent=GSCOCT00015923001 | |
| 28124 chr1 manual_curation CDS 37119764 37119848 . + 2 Parent=GSCOCT00015923001 | |
| 28125 chr1 manual_curation CDS 37118741 37118837 . + 1 Parent=GSCOCT00015923001 | |
| 28126 chr1 manual_curation CDS 37118492 37118607 . + 2 Parent=GSCOCT00015923001 | |
| 28127 chr1 manual_curation CDS 37117924 37118078 . + 0 Parent=GSCOCT00015923001 | |
| 28128 chr1 manual_curation CDS 37117636 37117733 . + 1 Parent=GSCOCT00015923001 | |
| 28129 chr1 manual_curation CDS 37117129 37117198 . + 0 Parent=GSCOCT00015923001 | |
| 28130 chr1 manual_curation CDS 37116631 37117020 . + 0 Parent=GSCOCT00015923001 | |
| 28131 chr1 manual_curation gene 37126148 37129418 . - . ID=GSCOCG00015921001;Name=Cc01_g20530 | |
| 28132 chr1 manual_curation mRNA 37126148 37129418 . - . ID=GSCOCT00015921001;Parent=GSCOCG00015921001;Name=Cc01_g20530 | |
| 28133 chr1 manual_curation polypeptide 37126430 37129201 . - . ID=GSCOCP00015921001;Dbxref=InterPro:IPR007087,InterPro:IPR015880,InterPro:IPR022755,PFAM:PF12171,PROFILE:PS50157,PROSITE:PS00028,SMART:SM00355,SwissProt:Q700D2,SwissProt:Q9FFH3,SwissProt:Q9ZWA6,TAIR:AT1G03840.1,TAIR:AT3G50700.1,TAIR:AT5G44160.1,TrEMBL:B9S3T6,TrEMBL:F6HPZ8,TrEMBL:G7KRT8;Derives_from=GSCOCT00015921001;Name=Cc01_g20530;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative Zinc finger protein MAGPIE,CC_functional_completeness:modules,CC_gene:NUC,CC_gene:MGP,CC_gene:JKD;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015921001~ Putative Zinc finger protein MAGPIE~ NUC~ modules;original_location=join(121990..122188%2C123015..123411%2C123606..124247%2C124521..124761);owner=coffea | |
| 28134 chr1 manual_curation exon 37129003 37129418 . - . Parent=GSCOCT00015921001 | |
| 28135 chr1 manual_curation exon 37127780 37128176 . - . Parent=GSCOCT00015921001 | |
| 28136 chr1 manual_curation exon 37126944 37127585 . - . Parent=GSCOCT00015921001 | |
| 28137 chr1 manual_curation exon 37126148 37126670 . - . Parent=GSCOCT00015921001 | |
| 28138 chr1 manual_curation CDS 37129003 37129201 . - 0 Parent=GSCOCT00015921001 | |
| 28139 chr1 manual_curation CDS 37127780 37128176 . - 1 Parent=GSCOCT00015921001 | |
| 28140 chr1 manual_curation CDS 37126944 37127585 . - 2 Parent=GSCOCT00015921001 | |
| 28141 chr1 manual_curation CDS 37126430 37126670 . - 2 Parent=GSCOCT00015921001 | |
| 28142 chr1 manual_curation gene 37141916 37142461 . + . ID=GSCOCG00015920001;Name=Cc01_g20540 | |
| 28143 chr1 manual_curation mRNA 37141916 37142461 . + . ID=GSCOCT00015920001;Parent=GSCOCG00015920001;Name=Cc01_g20540 | |
| 28144 chr1 manual_curation polypeptide 37141916 37142461 . + . ID=GSCOCP00015920001;Dbxref=GENE3D:G3DSA:1.10.20.10,InterPro:IPR003956,InterPro:IPR003957,InterPro:IPR003958,InterPro:IPR009072,PANTHER:PTHR11064:SF9,PFAM:PF00808,PRINTS:PR00615,PROSITE:PS00685,SUPERFAMILY:SSF47113,SwissProt:O82248,SwissProt:Q9FGJ3,SwissProt:Q9SIT9,TAIR:AT2G13570.1,TAIR:AT2G47810.1,TAIR:AT5G47640.1,TrEMBL:A5ALQ9,TrEMBL:F6HPZ6,TrEMBL:I1L7X0;Derives_from=GSCOCT00015920001;Name=Cc01_g20540;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0005622,GO:0005634,GO:0043565,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:NFYB5,CC_gene:NFYB2,CC_gene:NFYB7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015920001~ Putative uncharacterized protein~ NFYB5~ complete;original_location=complement(108730..109275);owner=coffea | |
| 28145 chr1 manual_curation exon 37141916 37142461 . + . Parent=GSCOCT00015920001 | |
| 28146 chr1 manual_curation CDS 37141916 37142461 . + 0 Parent=GSCOCT00015920001 | |
| 28147 chr1 manual_curation gene 37144216 37146148 . - . ID=GSCOCG00015919001;Name=Cc01_g20550 | |
| 28148 chr1 manual_curation mRNA 37144216 37146148 . - . ID=GSCOCT00015919001;Parent=GSCOCG00015919001;Name=Cc01_g20550 | |
| 28149 chr1 manual_curation polypeptide 37144216 37146148 . - . ID=GSCOCP00015919001;Dbxref=InterPro:IPR003855,PFAM:PF02705,SwissProt:Q5JK32,SwissProt:Q84MS3,SwissProt:Q9M7K4,TAIR:AT1G31120.1,TAIR:AT2G35060.2,TAIR:AT4G13420.1,TrEMBL:F6HPZ0,TrEMBL:F6HPZ4,TrEMBL:G7KRU2;Derives_from=GSCOCT00015919001;Name=Cc01_g20550;Ontology_term=CC_evidence_code:ISS,GO:0006813,GO:0015079,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative Potassium transporter,CC_functional_completeness:fragment,CC_gene:POT5,CC_gene:HAK5,CC_gene:HAK16;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015919001~ Putative Potassium transporter~ POT5~ fragment;original_location=join(105043..105075%2C105206..105526%2C105644..105767%2C106162..106553%2C106823..106975);owner=coffea | |
| 28150 chr1 manual_curation exon 37146116 37146148 . - . Parent=GSCOCT00015919001 | |
| 28151 chr1 manual_curation exon 37145665 37145985 . - . Parent=GSCOCT00015919001 | |
| 28152 chr1 manual_curation exon 37145424 37145547 . - . Parent=GSCOCT00015919001 | |
| 28153 chr1 manual_curation exon 37144638 37145029 . - . Parent=GSCOCT00015919001 | |
| 28154 chr1 manual_curation exon 37144216 37144368 . - . Parent=GSCOCT00015919001 | |
| 28155 chr1 manual_curation CDS 37146116 37146148 . - 0 Parent=GSCOCT00015919001 | |
| 28156 chr1 manual_curation CDS 37145665 37145985 . - 0 Parent=GSCOCT00015919001 | |
| 28157 chr1 manual_curation CDS 37145424 37145547 . - 0 Parent=GSCOCT00015919001 | |
| 28158 chr1 manual_curation CDS 37144638 37145029 . - 1 Parent=GSCOCT00015919001 | |
| 28159 chr1 manual_curation CDS 37144216 37144368 . - 0 Parent=GSCOCT00015919001 | |
| 28160 chr1 manual_curation gene 37149374 37153505 . - . ID=GSCOCG00015918001;Name=Cc01_g20560 | |
| 28161 chr1 manual_curation mRNA 37149374 37153505 . - . ID=GSCOCT00015918001;Parent=GSCOCG00015918001;Name=Cc01_g20560 | |
| 28162 chr1 manual_curation polypeptide 37149615 37153505 . - . ID=GSCOCP00015918001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:P54350,SwissProt:Q6Z829,SwissProt:Q8L4H0,TAIR:AT1G02970.1,TAIR:AT4G12020.2,TAIR:AT4G19110.2,TrEMBL:B6GV50,TrEMBL:B9T0U4,TrEMBL:D7TP05;Derives_from=GSCOCT00015918001;Name=Cc01_g20560;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.10.2,PRODUCT:Wee1-like protein kinase,CC_functional_completeness:complete,CC_gene:WEE1,CC_gene:wee;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015918001~ Wee1-like protein kinase~ WEE1~ complete;original_location=join(97686..97945%2C98065..98128%2C98241..98307%2C99306..99569%2C99715..99782%2C99886..99995%2C100084..100124%2C100211..100359%2C100924..101277%2C101478..101576);owner=coffea | |
| 28163 chr1 manual_curation exon 37153246 37153505 . - . Parent=GSCOCT00015918001 | |
| 28164 chr1 manual_curation exon 37153063 37153126 . - . Parent=GSCOCT00015918001 | |
| 28165 chr1 manual_curation exon 37152884 37152950 . - . Parent=GSCOCT00015918001 | |
| 28166 chr1 manual_curation exon 37151622 37151885 . - . Parent=GSCOCT00015918001 | |
| 28167 chr1 manual_curation exon 37151409 37151476 . - . Parent=GSCOCT00015918001 | |
| 28168 chr1 manual_curation exon 37151196 37151305 . - . Parent=GSCOCT00015918001 | |
| 28169 chr1 manual_curation exon 37151067 37151107 . - . Parent=GSCOCT00015918001 | |
| 28170 chr1 manual_curation exon 37150832 37150980 . - . Parent=GSCOCT00015918001 | |
| 28171 chr1 manual_curation exon 37149914 37150267 . - . Parent=GSCOCT00015918001 | |
| 28172 chr1 manual_curation exon 37149374 37149713 . - . Parent=GSCOCT00015918001 | |
| 28173 chr1 manual_curation CDS 37153246 37153505 . - 0 Parent=GSCOCT00015918001 | |
| 28174 chr1 manual_curation CDS 37153063 37153126 . - 2 Parent=GSCOCT00015918001 | |
| 28175 chr1 manual_curation CDS 37152884 37152950 . - 0 Parent=GSCOCT00015918001 | |
| 28176 chr1 manual_curation CDS 37151622 37151885 . - 1 Parent=GSCOCT00015918001 | |
| 28177 chr1 manual_curation CDS 37151409 37151476 . - 1 Parent=GSCOCT00015918001 | |
| 28178 chr1 manual_curation CDS 37151196 37151305 . - 0 Parent=GSCOCT00015918001 | |
| 28179 chr1 manual_curation CDS 37151067 37151107 . - 2 Parent=GSCOCT00015918001 | |
| 28180 chr1 manual_curation CDS 37150832 37150980 . - 1 Parent=GSCOCT00015918001 | |
| 28181 chr1 manual_curation CDS 37149914 37150267 . - 0 Parent=GSCOCT00015918001 | |
| 28182 chr1 manual_curation CDS 37149615 37149713 . - 0 Parent=GSCOCT00015918001 | |
| 28183 chr1 manual_curation gene 37156346 37159984 . + . ID=GSCOCG00015917001;Name=Cc01_g20570 | |
| 28184 chr1 manual_curation mRNA 37156346 37159984 . + . ID=GSCOCT00015917001;Parent=GSCOCG00015917001;Name=Cc01_g20570 | |
| 28185 chr1 manual_curation polypeptide 37156595 37159680 . + . ID=GSCOCP00015917001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR019781,PFAM:PF00400,SMART:SM00320,SUPERFAMILY:SSF50978,SwissProt:Q640T2,SwissProt:Q68F45,SwissProt:Q7ZUW6,TAIR:AT2G40810.1,TAIR:AT3G56440.1,TAIR:AT3G62770.1,TrEMBL:A5AVB9,TrEMBL:B9T0U7,TrEMBL:F6HPY7;Derives_from=GSCOCT00015917001;Name=Cc01_g20570;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative WD repeat domain phosphoinositide-interacting protein 3,CC_functional_completeness:complete,CC_gene:wdr45l;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015917001~ Putative WD repeat domain phosphoinositide-interacting protein 3~ wdr45l~ complete;original_location=complement(join(93727..94596%2C93213..93417%2C91860..91986%2C91511..91592));owner=coffea | |
| 28186 chr1 manual_curation exon 37159599 37159984 . + . Parent=GSCOCT00015917001 | |
| 28187 chr1 manual_curation exon 37159205 37159331 . + . Parent=GSCOCT00015917001 | |
| 28188 chr1 manual_curation exon 37157774 37157978 . + . Parent=GSCOCT00015917001 | |
| 28189 chr1 manual_curation exon 37156346 37157464 . + . Parent=GSCOCT00015917001 | |
| 28190 chr1 manual_curation CDS 37159599 37159680 . + 2 Parent=GSCOCT00015917001 | |
| 28191 chr1 manual_curation CDS 37159205 37159331 . + 1 Parent=GSCOCT00015917001 | |
| 28192 chr1 manual_curation CDS 37157774 37157978 . + 0 Parent=GSCOCT00015917001 | |
| 28193 chr1 manual_curation CDS 37156595 37157464 . + 0 Parent=GSCOCT00015917001 | |
| 28194 chr1 manual_curation gene 37161598 37162909 . + . ID=GSCOCG00015916001;Name=Cc01_g20580 | |
| 28195 chr1 manual_curation mRNA 37161598 37162909 . + . ID=GSCOCT00015916001;Parent=GSCOCG00015916001;Name=Cc01_g20580 | |
| 28196 chr1 manual_curation polypeptide 37161765 37162661 . + . ID=GSCOCP00015916001;Dbxref=GENE3D:G3DSA:1.20.1050.10,GENE3D:G3DSA:3.40.30.10,InterPro:IPR004045,InterPro:IPR004046,InterPro:IPR010987,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR017933,PFAM:PF00043,PFAM:PF02798,PROFILE:PS50404,PROFILE:PS50405,SUPERFAMILY:SSF47616,SUPERFAMILY:SSF52833,SwissProt:P30109,SwissProt:P46423,SwissProt:P46440,TAIR:AT1G02920.1,TAIR:AT1G02930.1,TAIR:AT2G47730.1,TrEMBL:A5YWI8,TrEMBL:O22330,TrEMBL:Q2QKE6;Derives_from=GSCOCT00015916001;Name=Cc01_g20580;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.5.1.18,PRODUCT:Glutathione S-transferase,CC_functional_completeness:complete,CC_gene:PARB,CC_gene:APIC;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015916001~ Glutathione S-transferase~ PARB~ complete;original_location=complement(join(89280..89426%2C89083..89131%2C88530..88990));owner=coffea | |
| 28197 chr1 manual_curation exon 37162201 37162909 . + . Parent=GSCOCT00015916001 | |
| 28198 chr1 manual_curation exon 37162060 37162108 . + . Parent=GSCOCT00015916001 | |
| 28199 chr1 manual_curation exon 37161598 37161911 . + . Parent=GSCOCT00015916001 | |
| 28200 chr1 manual_curation CDS 37162201 37162661 . + 1 Parent=GSCOCT00015916001 | |
| 28201 chr1 manual_curation CDS 37162060 37162108 . + 0 Parent=GSCOCT00015916001 | |
| 28202 chr1 manual_curation CDS 37161765 37161911 . + 0 Parent=GSCOCT00015916001 | |
| 28203 chr1 manual_curation gene 37164278 37165693 . - . ID=GSCOCG00015914001;Name=Cc01_g20590 | |
| 28204 chr1 manual_curation mRNA 37164278 37165693 . - . ID=GSCOCT00015914001;Parent=GSCOCG00015914001;Name=Cc01_g20590 | |
| 28205 chr1 manual_curation polypeptide 37164278 37165693 . - . ID=GSCOCP00015914001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:P93011,SwissProt:Q9FJY7,SwissProt:Q9SIL5,TAIR:AT2G20540.1,TAIR:AT2G33760.1,TAIR:AT5G66520.1,TIGRFAMs:TIGR00756,TrEMBL:B9I9T9,TrEMBL:G7KRU7,TrEMBL:I1NB40;Derives_from=GSCOCT00015914001;Name=Cc01_g20590;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Pentatricopeptide repeat-containing protein At5g66520,CC_functional_completeness:fragment,CC_gene:PCMP-H61,CC_gene:PCMP-E78,CC_gene:PCMP-H6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015914001~ Putative Pentatricopeptide repeat-containing protein At5g66520~ PCMP-H61~ fragment;original_location=85498..86913;owner=coffea | |
| 28206 chr1 manual_curation exon 37164278 37165693 . - . Parent=GSCOCT00015914001 | |
| 28207 chr1 manual_curation CDS 37164278 37165693 . - 0 Parent=GSCOCT00015914001 | |
| 28208 chr1 manual_curation gene 37166034 37168278 . + . ID=GSCOCG00015913001;Name=Cc01_g20600 | |
| 28209 chr1 manual_curation mRNA 37166034 37168278 . + . ID=GSCOCT00015913001;Parent=GSCOCG00015913001;Name=Cc01_g20600 | |
| 28210 chr1 manual_curation polypeptide 37166217 37168075 . + . ID=GSCOCP00015913001;Dbxref=HAMAP:MF_00376,InterPro:IPR001977,PFAM:PF01121,PROFILE:PS51219,SwissProt:Q0P4C4,SwissProt:Q71ZA4,SwissProt:Q92BF2,TAIR:AT2G27490.1,TIGRFAMs:TIGR00152,TrEMBL:A5C4Z5,TrEMBL:B9RM89,TrEMBL:D7U254;Derives_from=GSCOCT00015913001;Name=Cc01_g20600;Ontology_term=CC_evidence_code:ISS,GO:0004140,GO:0005524,GO:0015937,CC_EC_number:2.7.1.24,PRODUCT:Putative Dephospho-CoA kinase,CC_functional_completeness:modules,CC_gene:coaE,CC_gene:dcakd;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015913001~ Putative Dephospho-CoA kinase~ coaE~ modules;original_location=complement(join(84867..84974%2C84399..84544%2C83116..83551));owner=coffea | |
| 28211 chr1 manual_curation exon 37167640 37168278 . + . Parent=GSCOCT00015913001 | |
| 28212 chr1 manual_curation exon 37166647 37166792 . + . Parent=GSCOCT00015913001 | |
| 28213 chr1 manual_curation exon 37166034 37166324 . + . Parent=GSCOCT00015913001 | |
| 28214 chr1 manual_curation CDS 37167640 37168075 . + 2 Parent=GSCOCT00015913001 | |
| 28215 chr1 manual_curation CDS 37166647 37166792 . + 0 Parent=GSCOCT00015913001 | |
| 28216 chr1 manual_curation CDS 37166217 37166324 . + 0 Parent=GSCOCT00015913001 | |
| 28217 chr1 manual_curation gene 37170061 37172290 . + . ID=GSCOCG00015912001;Name=Cc01_g20610 | |
| 28218 chr1 manual_curation mRNA 37170061 37172290 . + . ID=GSCOCT00015912001;Parent=GSCOCG00015912001;Name=Cc01_g20610 | |
| 28219 chr1 manual_curation polypeptide 37170121 37172143 . + . ID=GSCOCP00015912001;Dbxref=GENE3D:G3DSA:3.40.50.720,HAMAP:MF_01576,InterPro:IPR000672,InterPro:IPR016040,InterPro:IPR020630,InterPro:IPR020631,InterPro:IPR020867,PFAM:PF00763,PFAM:PF02882,PRINTS:PR00085,PROSITE:PS00766,PROSITE:PS00767,SwissProt:A0LE04,SwissProt:O96553,SwissProt:Q2RIB4,TAIR:AT2G38660.1,TAIR:AT3G12290.1,TAIR:AT4G00620.1,TrEMBL:A9PIC3,TrEMBL:B9T0V4,TrEMBL:F6HZ29;Derives_from=GSCOCT00015912001;Name=Cc01_g20610;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,GO:0009396,CC_EC_number:3.5.4.9,PRODUCT:Putative C-1-tetrahydrofolate synthase%2C cytoplasmic,CC_functional_completeness:fragment,CC_gene:pug,CC_gene:folD;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015912001~ Putative C-1-tetrahydrofolate synthase%2C cytoplasmic~ pug~ fragment;original_location=complement(join(80957..81070%2C80536..80719%2C80226..80257%2C79748..79960%2C79048..79278));owner=coffea | |
| 28220 chr1 manual_curation exon 37171913 37172290 . + . Parent=GSCOCT00015912001 | |
| 28221 chr1 manual_curation exon 37171231 37171443 . + . Parent=GSCOCT00015912001 | |
| 28222 chr1 manual_curation exon 37170934 37170965 . + . Parent=GSCOCT00015912001 | |
| 28223 chr1 manual_curation exon 37170472 37170655 . + . Parent=GSCOCT00015912001 | |
| 28224 chr1 manual_curation exon 37170061 37170234 . + . Parent=GSCOCT00015912001 | |
| 28225 chr1 manual_curation CDS 37171913 37172143 . + 0 Parent=GSCOCT00015912001 | |
| 28226 chr1 manual_curation CDS 37171231 37171443 . + 0 Parent=GSCOCT00015912001 | |
| 28227 chr1 manual_curation CDS 37170934 37170965 . + 1 Parent=GSCOCT00015912001 | |
| 28228 chr1 manual_curation CDS 37170472 37170655 . + 0 Parent=GSCOCT00015912001 | |
| 28229 chr1 manual_curation CDS 37170121 37170234 . + 0 Parent=GSCOCT00015912001 | |
| 28230 chr1 manual_curation gene 37172660 37175649 . - . ID=GSCOCG00015911001;Name=Cc01_g20620 | |
| 28231 chr1 manual_curation mRNA 37172660 37175649 . - . ID=GSCOCT00015911001;Parent=GSCOCG00015911001;Name=Cc01_g20620 | |
| 28232 chr1 manual_curation polypeptide 37172864 37175503 . - . ID=GSCOCP00015911001;Dbxref=InterPro:IPR004993,PFAM:PF03321,SwissProt:O82243,SwissProt:P0C0M3,SwissProt:Q9FZ87,TAIR:AT1G28130.1,TAIR:AT2G47750.1,TAIR:AT5G54510.1,TrEMBL:B9GRX0,TrEMBL:B9T0V7,TrEMBL:F6HZ30;Derives_from=GSCOCT00015911001;Name=Cc01_g20620;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative indole-3-acetic acid-amido synthetase GH3.9,CC_functional_completeness:complete,CC_gene:GH3.9,CC_gene:GH3.11,CC_gene:GH3.17;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015911001~ Putative indole-3-acetic acid-amido synthetase GH3.9~ GH3.9~ complete;original_location=join(75688..75986%2C76092..76193%2C76580..77421%2C77753..78327);owner=coffea | |
| 28233 chr1 manual_curation exon 37175205 37175649 . - . Parent=GSCOCT00015911001 | |
| 28234 chr1 manual_curation exon 37174998 37175099 . - . Parent=GSCOCT00015911001 | |
| 28235 chr1 manual_curation exon 37173770 37174611 . - . Parent=GSCOCT00015911001 | |
| 28236 chr1 manual_curation exon 37172660 37173438 . - . Parent=GSCOCT00015911001 | |
| 28237 chr1 manual_curation CDS 37175205 37175503 . - 0 Parent=GSCOCT00015911001 | |
| 28238 chr1 manual_curation CDS 37174998 37175099 . - 2 Parent=GSCOCT00015911001 | |
| 28239 chr1 manual_curation CDS 37173770 37174611 . - 2 Parent=GSCOCT00015911001 | |
| 28240 chr1 manual_curation CDS 37172864 37173438 . - 1 Parent=GSCOCT00015911001 | |
| 28241 chr1 manual_curation gene 37184410 37188405 . + . ID=GSCOCG00015910001;Name=Cc01_g20630 | |
| 28242 chr1 manual_curation mRNA 37184410 37188405 . + . ID=GSCOCT00015910001;Parent=GSCOCG00015910001;Name=Cc01_g20630 | |
| 28243 chr1 manual_curation polypeptide 37184410 37188339 . + . ID=GSCOCP00015910001;Dbxref=GENE3D:G3DSA:1.25.40.10,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR013105,InterPro:IPR019734,InterPro:IPR021883,PFAM:PF07719,PFAM:PF11998,PROFILE:PS50005,PROFILE:PS50293,SMART:SM00028,TAIR:AT1G02910.1,TAIR:AT4G28740.1,TrEMBL:D7U260,TrEMBL:I1JQK6,TrEMBL:I1NB45;Derives_from=GSCOCT00015910001;Name=Cc01_g20630;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:tetratricopeptide repeat (TPR)-containing protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015910001~ tetratricopeptide repeat (TPR)-containing protein~ unknown_gene~ complete;original_location=complement(join(66488..66781%2C65861..65964%2C65355..65490%2C64975..65206%2C64702..64859%2C64406..64594%2C63864..63964%2C63531..63627%2C62852..62926));owner=coffea | |
| 28244 chr1 manual_curation exon 37188265 37188405 . + . Parent=GSCOCT00015910001 | |
| 28245 chr1 manual_curation exon 37187564 37187660 . + . Parent=GSCOCT00015910001 | |
| 28246 chr1 manual_curation exon 37187227 37187327 . + . Parent=GSCOCT00015910001 | |
| 28247 chr1 manual_curation exon 37186597 37186785 . + . Parent=GSCOCT00015910001 | |
| 28248 chr1 manual_curation exon 37186332 37186489 . + . Parent=GSCOCT00015910001 | |
| 28249 chr1 manual_curation exon 37185985 37186216 . + . Parent=GSCOCT00015910001 | |
| 28250 chr1 manual_curation exon 37185701 37185836 . + . Parent=GSCOCT00015910001 | |
| 28251 chr1 manual_curation exon 37185227 37185330 . + . Parent=GSCOCT00015910001 | |
| 28252 chr1 manual_curation exon 37184410 37184703 . + . Parent=GSCOCT00015910001 | |
| 28253 chr1 manual_curation CDS 37188265 37188339 . + 0 Parent=GSCOCT00015910001 | |
| 28254 chr1 manual_curation CDS 37187564 37187660 . + 2 Parent=GSCOCT00015910001 | |
| 28255 chr1 manual_curation CDS 37187227 37187327 . + 0 Parent=GSCOCT00015910001 | |
| 28256 chr1 manual_curation CDS 37186597 37186785 . + 0 Parent=GSCOCT00015910001 | |
| 28257 chr1 manual_curation CDS 37186332 37186489 . + 1 Parent=GSCOCT00015910001 | |
| 28258 chr1 manual_curation CDS 37185985 37186216 . + 0 Parent=GSCOCT00015910001 | |
| 28259 chr1 manual_curation CDS 37185701 37185836 . + 2 Parent=GSCOCT00015910001 | |
| 28260 chr1 manual_curation CDS 37185227 37185330 . + 0 Parent=GSCOCT00015910001 | |
| 28261 chr1 manual_curation CDS 37184410 37184703 . + 0 Parent=GSCOCT00015910001 | |
| 28262 chr1 manual_curation gene 37191043 37191414 . + . ID=GSCOCG00015908001;Name=Cc01_g20640 | |
| 28263 chr1 manual_curation mRNA 37191043 37191414 . + . ID=GSCOCT00015908001;Parent=GSCOCG00015908001;Name=Cc01_g20640 | |
| 28264 chr1 manual_curation polypeptide 37191043 37191414 . + . ID=GSCOCP00015908001;Dbxref=InterPro:IPR008801,PFAM:PF05498,TAIR:AT1G02900.1,TAIR:AT3G16570.1,TAIR:AT4G15800.1,TrEMBL:A5BYD6,TrEMBL:B9T0V9,TrEMBL:I1LBA3;Derives_from=GSCOCT00015908001;Name=Cc01_g20640;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:ralf-like 33,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015908001~ ralf-like 33~ unknown_gene~ complete;original_location=complement(59777..60148);owner=coffea | |
| 28265 chr1 manual_curation exon 37191043 37191414 . + . Parent=GSCOCT00015908001 | |
| 28266 chr1 manual_curation CDS 37191043 37191414 . + 0 Parent=GSCOCT00015908001 | |
| 28267 chr1 manual_curation gene 37192183 37196082 . - . ID=GSCOCG00015907001;Name=Cc01_g20650 | |
| 28268 chr1 manual_curation mRNA 37192183 37196082 . - . ID=GSCOCT00015907001;Parent=GSCOCG00015907001;Name=Cc01_g20650 | |
| 28269 chr1 manual_curation polypeptide 37192328 37196082 . - . ID=GSCOCP00015907001;Dbxref=InterPro:IPR007873,PFAM:PF05208,SwissProt:O82244,SwissProt:Q55F69,SwissProt:Q9C1K8,TAIR:AT2G47760.1,TrEMBL:A9PG35,TrEMBL:D7LHC0,TrEMBL:D7U263;Derives_from=GSCOCT00015907001;Name=Cc01_g20650;Ontology_term=CC_evidence_code:ISS,GO:0005783,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Dol-P-Man,CC_functional_completeness:complete,CC_gene:ALG3,CC_gene:alg3,CC_gene:alg-3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015907001~ Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1%2C3-mannosyltransferase~ ALG3~ complete;original_location=join(55109..55259%2C55349..55383%2C55511..55648%2C55876..55944%2C56271..56428%2C56532..56598%2C56697..56750%2C56943..57031%2C57354..57470%2C57817..57929%2C58064..58142%2C58524..58580%2C58683..58863);owner=coffea | |
| 28270 chr1 manual_curation exon 37195932 37196082 . - . Parent=GSCOCT00015907001 | |
| 28271 chr1 manual_curation exon 37195808 37195842 . - . Parent=GSCOCT00015907001 | |
| 28272 chr1 manual_curation exon 37195543 37195680 . - . Parent=GSCOCT00015907001 | |
| 28273 chr1 manual_curation exon 37195247 37195315 . - . Parent=GSCOCT00015907001 | |
| 28274 chr1 manual_curation exon 37194763 37194920 . - . Parent=GSCOCT00015907001 | |
| 28275 chr1 manual_curation exon 37194593 37194659 . - . Parent=GSCOCT00015907001 | |
| 28276 chr1 manual_curation exon 37194441 37194494 . - . Parent=GSCOCT00015907001 | |
| 28277 chr1 manual_curation exon 37194160 37194248 . - . Parent=GSCOCT00015907001 | |
| 28278 chr1 manual_curation exon 37193721 37193837 . - . Parent=GSCOCT00015907001 | |
| 28279 chr1 manual_curation exon 37193262 37193374 . - . Parent=GSCOCT00015907001 | |
| 28280 chr1 manual_curation exon 37193049 37193127 . - . Parent=GSCOCT00015907001 | |
| 28281 chr1 manual_curation exon 37192611 37192667 . - . Parent=GSCOCT00015907001 | |
| 28282 chr1 manual_curation exon 37192183 37192508 . - . Parent=GSCOCT00015907001 | |
| 28283 chr1 manual_curation CDS 37195932 37196082 . - 0 Parent=GSCOCT00015907001 | |
| 28284 chr1 manual_curation CDS 37195808 37195842 . - 1 Parent=GSCOCT00015907001 | |
| 28285 chr1 manual_curation CDS 37195543 37195680 . - 0 Parent=GSCOCT00015907001 | |
| 28286 chr1 manual_curation CDS 37195247 37195315 . - 0 Parent=GSCOCT00015907001 | |
| 28287 chr1 manual_curation CDS 37194763 37194920 . - 0 Parent=GSCOCT00015907001 | |
| 28288 chr1 manual_curation CDS 37194593 37194659 . - 2 Parent=GSCOCT00015907001 | |
| 28289 chr1 manual_curation CDS 37194441 37194494 . - 0 Parent=GSCOCT00015907001 | |
| 28290 chr1 manual_curation CDS 37194160 37194248 . - 0 Parent=GSCOCT00015907001 | |
| 28291 chr1 manual_curation CDS 37193721 37193837 . - 2 Parent=GSCOCT00015907001 | |
| 28292 chr1 manual_curation CDS 37193262 37193374 . - 2 Parent=GSCOCT00015907001 | |
| 28293 chr1 manual_curation CDS 37193049 37193127 . - 1 Parent=GSCOCT00015907001 | |
| 28294 chr1 manual_curation CDS 37192611 37192667 . - 2 Parent=GSCOCT00015907001 | |
| 28295 chr1 manual_curation CDS 37192328 37192508 . - 2 Parent=GSCOCT00015907001 | |
| 28296 chr1 manual_curation gene 37197376 37197963 . + . ID=GSCOCG00015906001;Name=Cc01_g20660 | |
| 28297 chr1 manual_curation mRNA 37197376 37197963 . + . ID=GSCOCT00015906001;Parent=GSCOCG00015906001;Name=Cc01_g20660 | |
| 28298 chr1 manual_curation polypeptide 37197376 37197963 . + . ID=GSCOCP00015906001;Dbxref=InterPro:IPR004307,PANTHER:PTHR10057,PFAM:PF03073,SwissProt:O82245,TAIR:AT2G47770.1,TrEMBL:B9GRX3,TrEMBL:B9I9T4,TrEMBL:B9T0W2;Derives_from=GSCOCT00015906001;Name=Cc01_g20660;Ontology_term=CC_evidence_code:ISS,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Putative Translocator protein homolog,CC_functional_completeness:complete,CC_gene:TSPO;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015906001~ Putative Translocator protein homolog~ TSPO~ complete;original_location=complement(53228..53815);owner=coffea | |
| 28299 chr1 manual_curation exon 37197376 37197963 . + . Parent=GSCOCT00015906001 | |
| 28300 chr1 manual_curation CDS 37197376 37197963 . + 0 Parent=GSCOCT00015906001 | |
| 28301 chr1 manual_curation gene 37198193 37200050 . - . ID=GSCOCG00015905001;Name=Cc01_g20670 | |
| 28302 chr1 manual_curation mRNA 37198193 37200050 . - . ID=GSCOCT00015905001;Parent=GSCOCG00015905001;Name=Cc01_g20670 | |
| 28303 chr1 manual_curation polypeptide 37198648 37200050 . - . ID=GSCOCP00015905001;Dbxref=InterPro:IPR005123,PFAM:PF03171,SwissProt:Q9UT12,TAIR:AT4G02485.1,TrEMBL:B9I9T2,TrEMBL:B9T0W3,TrEMBL:D7U265;Derives_from=GSCOCT00015905001;Name=Cc01_g20670;Ontology_term=CC_evidence_code:ISS,GO:0016491,CC_EC_number:missing_EC_number,PRODUCT:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein,CC_functional_completeness:fragment,CC_gene:SPAP8A3.02c;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015905001~ 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein~ SPAP8A3.02c~ fragment;original_location=join(51141..51197%2C51550..51756%2C52229..52543);owner=coffea | |
| 28304 chr1 manual_curation exon 37199994 37200050 . - . Parent=GSCOCT00015905001 | |
| 28305 chr1 manual_curation exon 37199435 37199641 . - . Parent=GSCOCT00015905001 | |
| 28306 chr1 manual_curation exon 37198193 37198962 . - . Parent=GSCOCT00015905001 | |
| 28307 chr1 manual_curation CDS 37199994 37200050 . - 0 Parent=GSCOCT00015905001 | |
| 28308 chr1 manual_curation CDS 37199435 37199641 . - 0 Parent=GSCOCT00015905001 | |
| 28309 chr1 manual_curation CDS 37198648 37198962 . - 0 Parent=GSCOCT00015905001 | |
| 28310 chr1 manual_curation gene 37200118 37200668 . - . ID=GSCOCG00015904001;Name=Cc01_g20680 | |
| 28311 chr1 manual_curation mRNA 37200118 37200668 . - . ID=GSCOCT00015904001;Parent=GSCOCG00015904001;Name=Cc01_g20680 | |
| 28312 chr1 manual_curation polypeptide 37200118 37200540 . - . ID=GSCOCP00015904001;Dbxref=TrEMBL:D7U265;Derives_from=GSCOCT00015904001;Name=Cc01_g20680;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015904001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=join(50651..50892%2C51040..51073);owner=coffea | |
| 28313 chr1 manual_curation exon 37200299 37200668 . - . Parent=GSCOCT00015904001 | |
| 28314 chr1 manual_curation exon 37200118 37200151 . - . Parent=GSCOCT00015904001 | |
| 28315 chr1 manual_curation CDS 37200299 37200540 . - 0 Parent=GSCOCT00015904001 | |
| 28316 chr1 manual_curation CDS 37200118 37200151 . - 2 Parent=GSCOCT00015904001 | |
| 28317 chr1 manual_curation gene 37202702 37205946 . + . ID=GSCOCG00015903001;Name=Cc01_g20690 | |
| 28318 chr1 manual_curation mRNA 37202702 37205946 . + . ID=GSCOCT00015903001;Parent=GSCOCG00015903001;Name=Cc01_g20690 | |
| 28319 chr1 manual_curation polypeptide 37202702 37205863 . + . ID=GSCOCP00015903001;Dbxref=InterPro:IPR008802,PFAM:PF05755,SwissProt:Q41112,SwissProt:Q9MA63,SwissProt:Q9SW70,TAIR:AT2G47780.1,TAIR:AT3G05500.1,TrEMBL:A5BRM4,TrEMBL:B9GS91,TrEMBL:F6HZ34;Derives_from=GSCOCT00015903001;Name=Cc01_g20690;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Stress-related protein,CC_functional_completeness:fragment,CC_gene:SRP,CC_gene:At3g05500;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015903001~ Stress-related protein~ SRP~ fragment;original_location=complement(join(48325..48489%2C47666..47919%2C45328..45451));owner=coffea | |
| 28320 chr1 manual_curation exon 37205740 37205946 . + . Parent=GSCOCT00015903001 | |
| 28321 chr1 manual_curation exon 37203272 37203525 . + . Parent=GSCOCT00015903001 | |
| 28322 chr1 manual_curation exon 37202702 37202866 . + . Parent=GSCOCT00015903001 | |
| 28323 chr1 manual_curation CDS 37205740 37205863 . + 2 Parent=GSCOCT00015903001 | |
| 28324 chr1 manual_curation CDS 37203272 37203525 . + 0 Parent=GSCOCT00015903001 | |
| 28325 chr1 manual_curation CDS 37202702 37202866 . + 0 Parent=GSCOCT00015903001 | |
| 28326 chr1 manual_curation gene 37209425 37222153 . + . ID=GSCOCG00015902001;Name=Cc01_g20700 | |
| 28327 chr1 manual_curation mRNA 37209425 37222153 . + . ID=GSCOCT00015902001;Parent=GSCOCG00015902001;Name=Cc01_g20700 | |
| 28328 chr1 manual_curation polypeptide 37209603 37221184 . + . ID=GSCOCP00015902001;Dbxref=GENE3D:G3DSA:2.60.200.20,InterPro:IPR000253,InterPro:IPR003593,InterPro:IPR003959,InterPro:IPR003960,InterPro:IPR008984,PFAM:PF00004,PROSITE:PS00674,SMART:SM00382,SUPERFAMILY:SSF49879,SwissProt:F6QV99,SwissProt:Q505J9,SwissProt:Q9D5T0,TAIR:AT1G02890.1,TAIR:AT4G02480.1,TAIR:AT4G24860.1,TrEMBL:B9I9T0,TrEMBL:D7U269,TrEMBL:I1L7W4;Derives_from=GSCOCT00015902001;Name=Cc01_g20700;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0017111,CC_EC_number:3.6.4.3,PRODUCT:Putative ATPase family AAA domain-containing protein 1,CC_functional_completeness:modules,CC_gene:Atad1,CC_gene:ATAD1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015902001~ Putative ATPase family AAA domain-containing protein 1~ Atad1~ modules;original_location=complement(join(41502..41588%2C41143..41353%2C40906..41030%2C38531..38653%2C38266..38409%2C37116..37792%2C36475..36596%2C36293..36384%2C35988..36207%2C35778..35841%2C34811..34959%2C34623..34690%2C34334..34507%2C34184..34255%2C33649..33750%2C33472..33561%2C32672..32747%2C32481..32577%2C32334..32403%2C32065..32244%2C31829..31951%2C31661..31744%2C31179..31363%2C30955..31093%2C30772..30831%2C30380..30484%2C30007..30120));owner=coffea | |
| 28329 chr1 manual_curation exon 37221071 37222153 . + . Parent=GSCOCT00015902001 | |
| 28330 chr1 manual_curation exon 37220707 37220811 . + . Parent=GSCOCT00015902001 | |
| 28331 chr1 manual_curation exon 37220360 37220419 . + . Parent=GSCOCT00015902001 | |
| 28332 chr1 manual_curation exon 37220098 37220236 . + . Parent=GSCOCT00015902001 | |
| 28333 chr1 manual_curation exon 37219828 37220012 . + . Parent=GSCOCT00015902001 | |
| 28334 chr1 manual_curation exon 37219447 37219530 . + . Parent=GSCOCT00015902001 | |
| 28335 chr1 manual_curation exon 37219240 37219362 . + . Parent=GSCOCT00015902001 | |
| 28336 chr1 manual_curation exon 37218947 37219126 . + . Parent=GSCOCT00015902001 | |
| 28337 chr1 manual_curation exon 37218788 37218857 . + . Parent=GSCOCT00015902001 | |
| 28338 chr1 manual_curation exon 37218614 37218710 . + . Parent=GSCOCT00015902001 | |
| 28339 chr1 manual_curation exon 37218444 37218519 . + . Parent=GSCOCT00015902001 | |
| 28340 chr1 manual_curation exon 37217630 37217719 . + . Parent=GSCOCT00015902001 | |
| 28341 chr1 manual_curation exon 37217441 37217542 . + . Parent=GSCOCT00015902001 | |
| 28342 chr1 manual_curation exon 37216936 37217007 . + . Parent=GSCOCT00015902001 | |
| 28343 chr1 manual_curation exon 37216684 37216857 . + . Parent=GSCOCT00015902001 | |
| 28344 chr1 manual_curation exon 37216501 37216568 . + . Parent=GSCOCT00015902001 | |
| 28345 chr1 manual_curation exon 37216232 37216380 . + . Parent=GSCOCT00015902001 | |
| 28346 chr1 manual_curation exon 37215350 37215413 . + . Parent=GSCOCT00015902001 | |
| 28347 chr1 manual_curation exon 37214984 37215203 . + . Parent=GSCOCT00015902001 | |
| 28348 chr1 manual_curation exon 37214807 37214898 . + . Parent=GSCOCT00015902001 | |
| 28349 chr1 manual_curation exon 37214595 37214716 . + . Parent=GSCOCT00015902001 | |
| 28350 chr1 manual_curation exon 37213399 37214075 . + . Parent=GSCOCT00015902001 | |
| 28351 chr1 manual_curation exon 37212782 37212925 . + . Parent=GSCOCT00015902001 | |
| 28352 chr1 manual_curation exon 37212538 37212660 . + . Parent=GSCOCT00015902001 | |
| 28353 chr1 manual_curation exon 37210161 37210285 . + . Parent=GSCOCT00015902001 | |
| 28354 chr1 manual_curation exon 37209838 37210048 . + . Parent=GSCOCT00015902001 | |
| 28355 chr1 manual_curation exon 37209425 37209689 . + . Parent=GSCOCT00015902001 | |
| 28356 chr1 manual_curation CDS 37221071 37221184 . + 0 Parent=GSCOCT00015902001 | |
| 28357 chr1 manual_curation CDS 37220707 37220811 . + 0 Parent=GSCOCT00015902001 | |
| 28358 chr1 manual_curation CDS 37220360 37220419 . + 0 Parent=GSCOCT00015902001 | |
| 28359 chr1 manual_curation CDS 37220098 37220236 . + 2 Parent=GSCOCT00015902001 | |
| 28360 chr1 manual_curation CDS 37219828 37220012 . + 0 Parent=GSCOCT00015902001 | |
| 28361 chr1 manual_curation CDS 37219447 37219530 . + 0 Parent=GSCOCT00015902001 | |
| 28362 chr1 manual_curation CDS 37219240 37219362 . + 0 Parent=GSCOCT00015902001 | |
| 28363 chr1 manual_curation CDS 37218947 37219126 . + 0 Parent=GSCOCT00015902001 | |
| 28364 chr1 manual_curation CDS 37218788 37218857 . + 2 Parent=GSCOCT00015902001 | |
| 28365 chr1 manual_curation CDS 37218614 37218710 . + 1 Parent=GSCOCT00015902001 | |
| 28366 chr1 manual_curation CDS 37218444 37218519 . + 0 Parent=GSCOCT00015902001 | |
| 28367 chr1 manual_curation CDS 37217630 37217719 . + 0 Parent=GSCOCT00015902001 | |
| 28368 chr1 manual_curation CDS 37217441 37217542 . + 0 Parent=GSCOCT00015902001 | |
| 28369 chr1 manual_curation CDS 37216936 37217007 . + 0 Parent=GSCOCT00015902001 | |
| 28370 chr1 manual_curation CDS 37216684 37216857 . + 0 Parent=GSCOCT00015902001 | |
| 28371 chr1 manual_curation CDS 37216501 37216568 . + 1 Parent=GSCOCT00015902001 | |
| 28372 chr1 manual_curation CDS 37216232 37216380 . + 2 Parent=GSCOCT00015902001 | |
| 28373 chr1 manual_curation CDS 37215350 37215413 . + 1 Parent=GSCOCT00015902001 | |
| 28374 chr1 manual_curation CDS 37214984 37215203 . + 0 Parent=GSCOCT00015902001 | |
| 28375 chr1 manual_curation CDS 37214807 37214898 . + 1 Parent=GSCOCT00015902001 | |
| 28376 chr1 manual_curation CDS 37214595 37214716 . + 2 Parent=GSCOCT00015902001 | |
| 28377 chr1 manual_curation CDS 37213399 37214075 . + 0 Parent=GSCOCT00015902001 | |
| 28378 chr1 manual_curation CDS 37212782 37212925 . + 0 Parent=GSCOCT00015902001 | |
| 28379 chr1 manual_curation CDS 37212538 37212660 . + 0 Parent=GSCOCT00015902001 | |
| 28380 chr1 manual_curation CDS 37210161 37210285 . + 1 Parent=GSCOCT00015902001 | |
| 28381 chr1 manual_curation CDS 37209838 37210048 . + 0 Parent=GSCOCT00015902001 | |
| 28382 chr1 manual_curation CDS 37209603 37209689 . + 0 Parent=GSCOCT00015902001 | |
| 28383 chr1 manual_curation gene 37223345 37223952 . + . ID=GSCOCG00015901001;Name=Cc01_g20710 | |
| 28384 chr1 manual_curation mRNA 37223345 37223952 . + . ID=GSCOCT00015901001;Parent=GSCOCG00015901001;Name=Cc01_g20710 | |
| 28385 chr1 manual_curation polypeptide 37223345 37223952 . + . ID=GSCOCP00015901001;Dbxref=InterPro:IPR007373,SUPERFAMILY:SSF63862,SwissProt:Q5E9T4,SwissProt:Q9H3S4,SwissProt:Q9R0M5,TAIR:AT1G02880.3,TAIR:AT2G44750.2,TrEMBL:A5APC0,TrEMBL:C0Z2Y6,TrEMBL:G7LBZ0;Derives_from=GSCOCT00015901001;Name=Cc01_g20710;Ontology_term=CC_evidence_code:ISS,GO:0004788,GO:0009229,CC_EC_number:2.7.6.2,PRODUCT:thiamin pyrophosphokinase 2,CC_functional_completeness:fragment,CC_gene:TPK1,CC_gene:Tpk1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015901001~ thiamin pyrophosphokinase 2~ TPK1~ fragment;original_location=complement(join(27609..27846%2C27239..27357));owner=coffea | |
| 28386 chr1 manual_curation exon 37223834 37223952 . + . Parent=GSCOCT00015901001 | |
| 28387 chr1 manual_curation exon 37223345 37223582 . + . Parent=GSCOCT00015901001 | |
| 28388 chr1 manual_curation CDS 37223834 37223952 . + 1 Parent=GSCOCT00015901001 | |
| 28389 chr1 manual_curation CDS 37223345 37223582 . + 0 Parent=GSCOCT00015901001 | |
| 28390 chr1 manual_curation gene 37225098 37231293 . + . ID=GSCOCG00015899001;Name=Cc01_g20720 | |
| 28391 chr1 manual_curation mRNA 37225098 37231293 . + . ID=GSCOCT00015899001;Parent=GSCOCG00015899001;Name=Cc01_g20720 | |
| 28392 chr1 manual_curation polypeptide 37225285 37230994 . + . ID=GSCOCP00015899001;Dbxref=GENE3D:G3DSA:3.30.230.10,GENE3D:G3DSA:3.30.565.10,InterPro:IPR002099,InterPro:IPR003594,InterPro:IPR013507,InterPro:IPR014721,InterPro:IPR014762,InterPro:IPR014763,InterPro:IPR014790,InterPro:IPR015434,InterPro:IPR020568,PANTHER:PTHR10073,PANTHER:PTHR10073:SF9,PFAM:PF01119,PFAM:PF02518,PFAM:PF08676,PROSITE:PS00058,SMART:SM00853,SUPERFAMILY:SSF54211,SUPERFAMILY:SSF55874,SwissProt:P54278,SwissProt:P54279,SwissProt:Q54QA0,TAIR:AT4G02460.1,TAIR:AT4G09140.1,TAIR:AT4G35520.1,TIGRFAMs:TIGR00585,TrEMBL:B9I9S8,TrEMBL:B9SAN7,TrEMBL:G7IF83;Derives_from=GSCOCT00015899001;Name=Cc01_g20720;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006298,GO:0030983,CC_EC_number:missing_EC_number,PRODUCT:DNA mismatch repair protein%2C putative,CC_functional_completeness:complete,CC_gene:PMS2,CC_gene:pms1,CC_gene:Pms2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015899001~ DNA mismatch repair protein%2C putative~ PMS2~ complete;original_location=complement(join(25655..25906%2C25182..25505%2C23457..24668%2C22986..23233%2C22777..22903%2C22606..22674%2C22409..22482%2C21457..21522%2C20841..20944%2C20459..20640%2C20197..20322));owner=coffea | |
| 28393 chr1 manual_curation exon 37230869 37231293 . + . Parent=GSCOCT00015899001 | |
| 28394 chr1 manual_curation exon 37230551 37230732 . + . Parent=GSCOCT00015899001 | |
| 28395 chr1 manual_curation exon 37230247 37230350 . + . Parent=GSCOCT00015899001 | |
| 28396 chr1 manual_curation exon 37229669 37229734 . + . Parent=GSCOCT00015899001 | |
| 28397 chr1 manual_curation exon 37228709 37228782 . + . Parent=GSCOCT00015899001 | |
| 28398 chr1 manual_curation exon 37228517 37228585 . + . Parent=GSCOCT00015899001 | |
| 28399 chr1 manual_curation exon 37228288 37228414 . + . Parent=GSCOCT00015899001 | |
| 28400 chr1 manual_curation exon 37227958 37228205 . + . Parent=GSCOCT00015899001 | |
| 28401 chr1 manual_curation exon 37226523 37227734 . + . Parent=GSCOCT00015899001 | |
| 28402 chr1 manual_curation exon 37225686 37226009 . + . Parent=GSCOCT00015899001 | |
| 28403 chr1 manual_curation exon 37225098 37225536 . + . Parent=GSCOCT00015899001 | |
| 28404 chr1 manual_curation CDS 37230869 37230994 . + 0 Parent=GSCOCT00015899001 | |
| 28405 chr1 manual_curation CDS 37230551 37230732 . + 1 Parent=GSCOCT00015899001 | |
| 28406 chr1 manual_curation CDS 37230247 37230350 . + 2 Parent=GSCOCT00015899001 | |
| 28407 chr1 manual_curation CDS 37229669 37229734 . + 2 Parent=GSCOCT00015899001 | |
| 28408 chr1 manual_curation CDS 37228709 37228782 . + 0 Parent=GSCOCT00015899001 | |
| 28409 chr1 manual_curation CDS 37228517 37228585 . + 0 Parent=GSCOCT00015899001 | |
| 28410 chr1 manual_curation CDS 37228288 37228414 . + 2 Parent=GSCOCT00015899001 | |
| 28411 chr1 manual_curation CDS 37227958 37228205 . + 0 Parent=GSCOCT00015899001 | |
| 28412 chr1 manual_curation CDS 37226523 37227734 . + 0 Parent=GSCOCT00015899001 | |
| 28413 chr1 manual_curation CDS 37225686 37226009 . + 0 Parent=GSCOCT00015899001 | |
| 28414 chr1 manual_curation CDS 37225285 37225536 . + 0 Parent=GSCOCT00015899001 | |
| 28415 chr1 manual_curation gene 37231526 37235043 . - . ID=GSCOCG00015898001;Name=Cc01_g20730 | |
| 28416 chr1 manual_curation mRNA 37231526 37235043 . - . ID=GSCOCT00015898001;Parent=GSCOCG00015898001;Name=Cc01_g20730 | |
| 28417 chr1 manual_curation polypeptide 37231700 37234698 . - . ID=GSCOCP00015898001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019775,InterPro:IPR019781,InterPro:IPR019782,PFAM:PF00400,PROFILE:PS50082,PROFILE:PS50294,PROSITE:PS00678,SMART:SM00320,SUPERFAMILY:SSF50978,SwissProt:Q54QU5,SwissProt:Q5FVP5,SwissProt:Q9D0R9,TAIR:AT2G47790.1,TrEMBL:A5APC1,TrEMBL:C6TB44,TrEMBL:I1JQL5;Derives_from=GSCOCT00015898001;Name=Cc01_g20730;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative WD repeat-containing protein 89,CC_functional_completeness:complete,CC_gene:Wdr89,CC_gene:wdr89;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015898001~ Putative WD repeat-containing protein 89~ Wdr89~ complete;original_location=join(16493..16626%2C16792..17149%2C17187..17282%2C17617..17691%2C18030..18140%2C18461..18552%2C18732..18816%2C19114..19491);owner=coffea | |
| 28418 chr1 manual_curation exon 37234565 37235043 . - . Parent=GSCOCT00015898001 | |
| 28419 chr1 manual_curation exon 37234042 37234399 . - . Parent=GSCOCT00015898001 | |
| 28420 chr1 manual_curation exon 37233909 37234004 . - . Parent=GSCOCT00015898001 | |
| 28421 chr1 manual_curation exon 37233500 37233574 . - . Parent=GSCOCT00015898001 | |
| 28422 chr1 manual_curation exon 37233051 37233161 . - . Parent=GSCOCT00015898001 | |
| 28423 chr1 manual_curation exon 37232639 37232730 . - . Parent=GSCOCT00015898001 | |
| 28424 chr1 manual_curation exon 37232375 37232459 . - . Parent=GSCOCT00015898001 | |
| 28425 chr1 manual_curation exon 37231526 37232077 . - . Parent=GSCOCT00015898001 | |
| 28426 chr1 manual_curation CDS 37234565 37234698 . - 0 Parent=GSCOCT00015898001 | |
| 28427 chr1 manual_curation CDS 37234042 37234399 . - 2 Parent=GSCOCT00015898001 | |
| 28428 chr1 manual_curation CDS 37233909 37234004 . - 0 Parent=GSCOCT00015898001 | |
| 28429 chr1 manual_curation CDS 37233500 37233574 . - 0 Parent=GSCOCT00015898001 | |
| 28430 chr1 manual_curation CDS 37233051 37233161 . - 0 Parent=GSCOCT00015898001 | |
| 28431 chr1 manual_curation CDS 37232639 37232730 . - 0 Parent=GSCOCT00015898001 | |
| 28432 chr1 manual_curation CDS 37232375 37232459 . - 2 Parent=GSCOCT00015898001 | |
| 28433 chr1 manual_curation CDS 37231700 37232077 . - 0 Parent=GSCOCT00015898001 | |
| 28434 chr1 manual_curation gene 37235632 37239593 . - . ID=GSCOCG00015897001;Name=Cc01_g20740 | |
| 28435 chr1 manual_curation mRNA 37235632 37239593 . - . ID=GSCOCT00015897001;Parent=GSCOCG00015897001;Name=Cc01_g20740 | |
| 28436 chr1 manual_curation polypeptide 37235995 37239593 . - . ID=GSCOCP00015897001;Dbxref=InterPro:IPR007052,InterPro:IPR008978,InterPro:IPR017447,PFAM:PF04969,PROFILE:PS51203,SUPERFAMILY:SSF49764,SwissProt:P0C8Z0,SwissProt:Q6ID70,SwissProt:Q6YYB0,TAIR:AT3G03773.2,TAIR:AT4G02450.1,TrEMBL:C6TIY1,TrEMBL:F6HZ37,TrEMBL:G7IF81;Derives_from=GSCOCT00015897001;Name=Cc01_g20740;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:Os08g0359500,CC_gene:OsI_027940,CC_gene:At3g03773;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015897001~ Hypothetical protein~ Os08g0359500~ missing_functional_completeness;original_location=join(11598..11714%2C11773..11879%2C12998..13184%2C13510..13663%2C13759..13796%2C13887..14049%2C15102..15196);owner=coffea | |
| 28437 chr1 manual_curation exon 37239477 37239593 . - . Parent=GSCOCT00015897001 | |
| 28438 chr1 manual_curation exon 37239312 37239418 . - . Parent=GSCOCT00015897001 | |
| 28439 chr1 manual_curation exon 37238007 37238193 . - . Parent=GSCOCT00015897001 | |
| 28440 chr1 manual_curation exon 37237528 37237681 . - . Parent=GSCOCT00015897001 | |
| 28441 chr1 manual_curation exon 37237395 37237432 . - . Parent=GSCOCT00015897001 | |
| 28442 chr1 manual_curation exon 37237142 37237304 . - . Parent=GSCOCT00015897001 | |
| 28443 chr1 manual_curation exon 37235632 37236089 . - . Parent=GSCOCT00015897001 | |
| 28444 chr1 manual_curation CDS 37239477 37239593 . - 0 Parent=GSCOCT00015897001 | |
| 28445 chr1 manual_curation CDS 37239312 37239418 . - 0 Parent=GSCOCT00015897001 | |
| 28446 chr1 manual_curation CDS 37238007 37238193 . - 2 Parent=GSCOCT00015897001 | |
| 28447 chr1 manual_curation CDS 37237528 37237681 . - 0 Parent=GSCOCT00015897001 | |
| 28448 chr1 manual_curation CDS 37237395 37237432 . - 1 Parent=GSCOCT00015897001 | |
| 28449 chr1 manual_curation CDS 37237142 37237304 . - 0 Parent=GSCOCT00015897001 | |
| 28450 chr1 manual_curation CDS 37235995 37236089 . - 1 Parent=GSCOCT00015897001 | |
| 28451 chr1 manual_curation gene 37244516 37245771 . - . ID=GSCOCG00015896001;Name=Cc01_g20750 | |
| 28452 chr1 manual_curation mRNA 37244516 37245771 . - . ID=GSCOCT00015896001;Parent=GSCOCG00015896001;Name=Cc01_g20750 | |
| 28453 chr1 manual_curation polypeptide 37244516 37244779 . - . ID=GSCOCP00015896001;Dbxref=TAIR:AT1G51380.1,TAIR:AT3G19760.1;Derives_from=GSCOCT00015896001;Name=Cc01_g20750;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:eukaryotic initiation factor 4A-III,CC_functional_completeness:fragment,CC_gene:TIF4A-3,CC_gene:Os06g0701100,CC_gene:TIF4A-1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00015896001~ eukaryotic initiation factor 4A-III~ TIF4A-3~ fragment;original_location=6412..6675;owner=coffea | |
| 28454 chr1 manual_curation exon 37244516 37245771 . - . Parent=GSCOCT00015896001 | |
| 28455 chr1 manual_curation CDS 37244516 37244779 . - 0 Parent=GSCOCT00015896001 | |
| 28456 chr1 manual_curation gene 37264202 37265036 . + . ID=GSCOCG00005063001;Name=Cc01_g20760 | |
| 28457 chr1 manual_curation mRNA 37264202 37265036 . + . ID=GSCOCT00005063001;Parent=GSCOCG00005063001;Name=Cc01_g20760 | |
| 28458 chr1 manual_curation polypeptide 37264202 37265036 . + . ID=GSCOCP00005063001;Dbxref=GENE3D:G3DSA:2.60.40.10,InterPro:IPR002044,InterPro:IPR013783,InterPro:IPR013784,PFAM:PF00686,PROFILE:PS51166,SUPERFAMILY:SSF49452,TAIR:AT5G01260.2,TrEMBL:A5ADY7,TrEMBL:B9SQ50,TrEMBL:F6HKS9;Derives_from=GSCOCT00005063001;Name=Cc01_g20760;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0030246,CC_EC_number:missing_EC_number,PRODUCT:Catalytic%2C putative,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005063001~ Catalytic%2C putative~ unknown_gene~ fragment;original_location=complement(join(929154..929199%2C928902..929062%2C928365..928790));owner=coffea | |
| 28459 chr1 manual_curation exon 37264611 37265036 . + . Parent=GSCOCT00005063001 | |
| 28460 chr1 manual_curation exon 37264339 37264499 . + . Parent=GSCOCT00005063001 | |
| 28461 chr1 manual_curation exon 37264202 37264247 . + . Parent=GSCOCT00005063001 | |
| 28462 chr1 manual_curation CDS 37264611 37265036 . + 0 Parent=GSCOCT00005063001 | |
| 28463 chr1 manual_curation CDS 37264339 37264499 . + 1 Parent=GSCOCT00005063001 | |
| 28464 chr1 manual_curation CDS 37264202 37264247 . + 0 Parent=GSCOCT00005063001 | |
| 28465 chr1 manual_curation gene 37269326 37271182 . - . ID=GSCOCG00005062001;Name=Cc01_g20770 | |
| 28466 chr1 manual_curation mRNA 37269326 37271182 . - . ID=GSCOCT00005062001;Parent=GSCOCG00005062001;Name=Cc01_g20770 | |
| 28467 chr1 manual_curation polypeptide 37269672 37270649 . - . ID=GSCOCP00005062001;Dbxref=InterPro:IPR001810,PFAM:PF00646,SwissProt:Q8LEA8,TAIR:AT4G02440.1,TrEMBL:A5BLJ1,TrEMBL:B9SAQ8,TrEMBL:F6HZ43;Derives_from=GSCOCT00005062001;Name=Cc01_g20770;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Phytochrome A-associated F-box protein,CC_functional_completeness:complete,CC_gene:EID1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005062001~ Phytochrome A-associated F-box protein~ EID1~ complete;original_location=922752..923729;owner=coffea | |
| 28468 chr1 manual_curation exon 37269326 37271182 . - . Parent=GSCOCT00005062001 | |
| 28469 chr1 manual_curation CDS 37269672 37270649 . - 0 Parent=GSCOCT00005062001 | |
| 28470 chr1 manual_curation gene 37272221 37273117 . - . ID=GSCOCG00005061001;Name=Cc01_g20780 | |
| 28471 chr1 manual_curation mRNA 37272221 37273117 . - . ID=GSCOCT00005061001;Parent=GSCOCG00005061001;Name=Cc01_g20780 | |
| 28472 chr1 manual_curation polypeptide 37272566 37273031 . - . ID=GSCOCP00005061001;Derives_from=GSCOCT00005061001;Name=Cc01_g20780;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005061001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(920370..920443%2C920601..920701%2C920798..920835);owner=coffea | |
| 28473 chr1 manual_curation exon 37272958 37273117 . - . Parent=GSCOCT00005061001 | |
| 28474 chr1 manual_curation exon 37272700 37272800 . - . Parent=GSCOCT00005061001 | |
| 28475 chr1 manual_curation exon 37272221 37272603 . - . Parent=GSCOCT00005061001 | |
| 28476 chr1 manual_curation CDS 37272958 37273031 . - 0 Parent=GSCOCT00005061001 | |
| 28477 chr1 manual_curation CDS 37272700 37272800 . - 2 Parent=GSCOCT00005061001 | |
| 28478 chr1 manual_curation CDS 37272566 37272603 . - 1 Parent=GSCOCT00005061001 | |
| 28479 chr1 manual_curation gene 37273254 37278034 . - . ID=GSCOCG00005060001;Name=Cc01_g20790 | |
| 28480 chr1 manual_curation mRNA 37273254 37278034 . - . ID=GSCOCT00005060001;Parent=GSCOCG00005060001;Name=Cc01_g20790 | |
| 28481 chr1 manual_curation polypeptide 37273532 37277181 . - . ID=GSCOCP00005060001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR012677,PFAM:PF00076,PROFILE:PS50102,SMART:SM00360,SwissProt:O22315,SwissProt:Q5ZML3,SwissProt:Q9NEW6,TAIR:AT1G02840.1,TAIR:AT1G09140.1,TAIR:AT3G49430.1,TrEMBL:A5BLJ1,TrEMBL:I1NB60,TrEMBL:I1NB61;Derives_from=GSCOCT00005060001;Name=Cc01_g20790;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterized protein,CC_functional_completeness:complete,CC_gene:SF2,CC_gene:rsp-3,CC_gene:SRSF1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005060001~ Uncharacterized protein~ SF2~ complete;original_location=join(916220..916303%2C916957..917022%2C917099..917173%2C917270..917351%2C917468..917514%2C917703..917760%2C917985..918034%2C918160..918216%2C918300..918403%2C918497..918595%2C919830..919869);owner=coffea | |
| 28482 chr1 manual_curation exon 37277881 37278034 . - . Parent=GSCOCT00005060001 | |
| 28483 chr1 manual_curation exon 37273254 37273401 . - . Parent=GSCOCT00005060001 | |
| 28484 chr1 manual_curation exon 37277098 37277186 . - . Parent=GSCOCT00005060001 | |
| 28485 chr1 manual_curation exon 37276379 37276444 . - . Parent=GSCOCT00005060001 | |
| 28486 chr1 manual_curation exon 37276228 37276302 . - . Parent=GSCOCT00005060001 | |
| 28487 chr1 manual_curation exon 37276050 37276131 . - . Parent=GSCOCT00005060001 | |
| 28488 chr1 manual_curation exon 37275887 37275933 . - . Parent=GSCOCT00005060001 | |
| 28489 chr1 manual_curation exon 37275641 37275698 . - . Parent=GSCOCT00005060001 | |
| 28490 chr1 manual_curation exon 37275367 37275416 . - . Parent=GSCOCT00005060001 | |
| 28491 chr1 manual_curation exon 37275185 37275241 . - . Parent=GSCOCT00005060001 | |
| 28492 chr1 manual_curation exon 37274998 37275101 . - . Parent=GSCOCT00005060001 | |
| 28493 chr1 manual_curation exon 37274806 37274904 . - . Parent=GSCOCT00005060001 | |
| 28494 chr1 manual_curation exon 37273484 37273571 . - . Parent=GSCOCT00005060001 | |
| 28495 chr1 manual_curation CDS 37277098 37277181 . - 0 Parent=GSCOCT00005060001 | |
| 28496 chr1 manual_curation CDS 37276379 37276444 . - 0 Parent=GSCOCT00005060001 | |
| 28497 chr1 manual_curation CDS 37276228 37276302 . - 0 Parent=GSCOCT00005060001 | |
| 28498 chr1 manual_curation CDS 37276050 37276131 . - 0 Parent=GSCOCT00005060001 | |
| 28499 chr1 manual_curation CDS 37275887 37275933 . - 1 Parent=GSCOCT00005060001 | |
| 28500 chr1 manual_curation CDS 37275641 37275698 . - 0 Parent=GSCOCT00005060001 | |
| 28501 chr1 manual_curation CDS 37275367 37275416 . - 1 Parent=GSCOCT00005060001 | |
| 28502 chr1 manual_curation CDS 37275185 37275241 . - 0 Parent=GSCOCT00005060001 | |
| 28503 chr1 manual_curation CDS 37274998 37275101 . - 0 Parent=GSCOCT00005060001 | |
| 28504 chr1 manual_curation CDS 37274806 37274904 . - 2 Parent=GSCOCT00005060001 | |
| 28505 chr1 manual_curation CDS 37273532 37273571 . - 2 Parent=GSCOCT00005060001 | |
| 28506 chr1 manual_curation gene 37279814 37289993 . + . ID=GSCOCG00005059001;Name=Cc01_g20800 | |
| 28507 chr1 manual_curation mRNA 37279814 37289993 . + . ID=GSCOCT00005059001;Parent=GSCOCG00005059001;Name=Cc01_g20800 | |
| 28508 chr1 manual_curation polypeptide 37279889 37289993 . + . ID=GSCOCP00005059001;Dbxref=InterPro:IPR000571,InterPro:IPR001650,InterPro:IPR014001,InterPro:IPR014021,PFAM:PF00271,PROFILE:PS50103,PROFILE:PS51192,PROFILE:PS51194,SMART:SM00356,SMART:SM00487,SMART:SM00490,SwissProt:O22243,SwissProt:Q16JS8,SwissProt:Q1EHT7,TAIR:AT2G35920.1,TAIR:AT2G47680.1,TAIR:AT3G26560.1,TrEMBL:B9SAR2,TrEMBL:D7LGQ4,TrEMBL:G7IF63;Derives_from=GSCOCT00005059001;Name=Cc01_g20800;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0004386,GO:0005524,GO:0008270,CC_EC_number:3.6.1.15,PRODUCT:Zinc finger CCCH domain-containing protein 31,CC_functional_completeness:complete,CC_gene:At2g47680,CC_gene:Os01g0256800,CC_gene:spn-E;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005059001~ Zinc finger CCCH domain-containing protein 31~ At2g47680~ complete;original_location=complement(join(913341..913512%2C911950..912127%2C910242..910415%2C909914..910061%2C909132..909446%2C908737..908883%2C908478..908658%2C907529..907809%2C907327..907449%2C907050..907194%2C906678..906946%2C906408..906602%2C904912..905433%2C903408..903623));owner=coffea | |
| 28509 chr1 manual_curation exon 37289778 37289993 . + . Parent=GSCOCT00005059001 | |
| 28510 chr1 manual_curation exon 37287968 37288489 . + . Parent=GSCOCT00005059001 | |
| 28511 chr1 manual_curation exon 37286799 37286993 . + . Parent=GSCOCT00005059001 | |
| 28512 chr1 manual_curation exon 37286455 37286723 . + . Parent=GSCOCT00005059001 | |
| 28513 chr1 manual_curation exon 37286207 37286351 . + . Parent=GSCOCT00005059001 | |
| 28514 chr1 manual_curation exon 37285952 37286074 . + . Parent=GSCOCT00005059001 | |
| 28515 chr1 manual_curation exon 37285592 37285872 . + . Parent=GSCOCT00005059001 | |
| 28516 chr1 manual_curation exon 37284743 37284923 . + . Parent=GSCOCT00005059001 | |
| 28517 chr1 manual_curation exon 37284518 37284664 . + . Parent=GSCOCT00005059001 | |
| 28518 chr1 manual_curation exon 37283955 37284269 . + . Parent=GSCOCT00005059001 | |
| 28519 chr1 manual_curation exon 37283340 37283487 . + . Parent=GSCOCT00005059001 | |
| 28520 chr1 manual_curation exon 37282986 37283159 . + . Parent=GSCOCT00005059001 | |
| 28521 chr1 manual_curation exon 37281274 37281451 . + . Parent=GSCOCT00005059001 | |
| 28522 chr1 manual_curation exon 37279814 37280060 . + . Parent=GSCOCT00005059001 | |
| 28523 chr1 manual_curation CDS 37289778 37289993 . + 0 Parent=GSCOCT00005059001 | |
| 28524 chr1 manual_curation CDS 37287968 37288489 . + 0 Parent=GSCOCT00005059001 | |
| 28525 chr1 manual_curation CDS 37286799 37286993 . + 0 Parent=GSCOCT00005059001 | |
| 28526 chr1 manual_curation CDS 37286455 37286723 . + 1 Parent=GSCOCT00005059001 | |
| 28527 chr1 manual_curation CDS 37286207 37286351 . + 0 Parent=GSCOCT00005059001 | |
| 28528 chr1 manual_curation CDS 37285952 37286074 . + 0 Parent=GSCOCT00005059001 | |
| 28529 chr1 manual_curation CDS 37285592 37285872 . + 1 Parent=GSCOCT00005059001 | |
| 28530 chr1 manual_curation CDS 37284743 37284923 . + 0 Parent=GSCOCT00005059001 | |
| 28531 chr1 manual_curation CDS 37284518 37284664 . + 0 Parent=GSCOCT00005059001 | |
| 28532 chr1 manual_curation CDS 37283955 37284269 . + 0 Parent=GSCOCT00005059001 | |
| 28533 chr1 manual_curation CDS 37283340 37283487 . + 2 Parent=GSCOCT00005059001 | |
| 28534 chr1 manual_curation CDS 37282986 37283159 . + 2 Parent=GSCOCT00005059001 | |
| 28535 chr1 manual_curation CDS 37281274 37281451 . + 1 Parent=GSCOCT00005059001 | |
| 28536 chr1 manual_curation CDS 37279889 37280060 . + 0 Parent=GSCOCT00005059001 | |
| 28537 chr1 manual_curation gene 37292640 37295864 . + . ID=GSCOCG00005056001;Name=Cc01_g20810 | |
| 28538 chr1 manual_curation mRNA 37292640 37295864 . + . ID=GSCOCT00005056001;Parent=GSCOCG00005056001;Name=Cc01_g20810 | |
| 28539 chr1 manual_curation polypeptide 37292763 37295714 . + . ID=GSCOCP00005056001;Dbxref=TAIR:AT4G02425.1,TrEMBL:B9SAR3,TrEMBL:F6HZ50,TrEMBL:I1JBL6;Derives_from=GSCOCT00005056001;Name=Cc01_g20810;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005056001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B Has 29 Blast hits to 28 proteins in 15 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 6%3B Fungi - 0%3B Plants - 23%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(899921..900638%2C897687..897793));owner=coffea | |
| 28540 chr1 manual_curation exon 37295608 37295864 . + . Parent=GSCOCT00005056001 | |
| 28541 chr1 manual_curation exon 37292640 37293480 . + . Parent=GSCOCT00005056001 | |
| 28542 chr1 manual_curation CDS 37295608 37295714 . + 1 Parent=GSCOCT00005056001 | |
| 28543 chr1 manual_curation CDS 37292763 37293480 . + 0 Parent=GSCOCT00005056001 | |
| 28544 chr1 manual_curation gene 37296388 37297678 . + . ID=GSCOCG00005055001;Name=Cc01_g20820 | |
| 28545 chr1 manual_curation mRNA 37296388 37297678 . + . ID=GSCOCT00005055001;Parent=GSCOCG00005055001;Name=Cc01_g20820 | |
| 28546 chr1 manual_curation polypeptide 37296443 37297406 . + . ID=GSCOCP00005055001;Dbxref=InterPro:IPR008011,PFAM:PF05347,TAIR:AT3G62810.1,TrEMBL:B9I9R9,TrEMBL:B9SAR4,TrEMBL:D7LTA0;Derives_from=GSCOCT00005055001;Name=Cc01_g20820;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:complex 1 family protein / LVR family protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005055001~ complex 1 family protein / LVR family protein~ unknown_gene~ modules;original_location=complement(join(896634..896958%2C895995..896071));owner=coffea | |
| 28547 chr1 manual_curation exon 37297330 37297678 . + . Parent=GSCOCT00005055001 | |
| 28548 chr1 manual_curation exon 37296388 37296767 . + . Parent=GSCOCT00005055001 | |
| 28549 chr1 manual_curation CDS 37297330 37297406 . + 1 Parent=GSCOCT00005055001 | |
| 28550 chr1 manual_curation CDS 37296443 37296767 . + 0 Parent=GSCOCT00005055001 | |
| 28551 chr1 manual_curation gene 37308452 37313630 . + . ID=GSCOCG00005053001;Name=Cc01_g20830 | |
| 28552 chr1 manual_curation mRNA 37308452 37313630 . + . ID=GSCOCT00005053001;Parent=GSCOCG00005053001;Name=Cc01_g20830 | |
| 28553 chr1 manual_curation polypeptide 37309596 37313177 . + . ID=GSCOCP00005053001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR001509,InterPro:IPR016040,PFAM:PF01370,SwissProt:Q5R885,SwissProt:Q8NBZ7,SwissProt:Q91XL3,TAIR:AT3G53520.4;Derives_from=GSCOCT00005053001;Name=Cc01_g20830;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,GO:0044237,GO:0050662,CC_EC_number:4.1.1.35,PRODUCT:UDP-glucuronic acid decarboxylase 1,CC_functional_completeness:fragment,CC_gene:UXS1,CC_gene:Uxs1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005053001~ UDP-glucuronic acid decarboxylase 1~ UXS1~ fragment;original_location=complement(join(883685..883805%2C882807..882886%2C882360..882443%2C882178..882252%2C881105..881197%2C880224..880439));owner=coffea | |
| 28554 chr1 manual_curation exon 37312962 37313630 . + . Parent=GSCOCT00005053001 | |
| 28555 chr1 manual_curation exon 37312204 37312296 . + . Parent=GSCOCT00005053001 | |
| 28556 chr1 manual_curation exon 37311149 37311223 . + . Parent=GSCOCT00005053001 | |
| 28557 chr1 manual_curation exon 37310958 37311041 . + . Parent=GSCOCT00005053001 | |
| 28558 chr1 manual_curation exon 37310515 37310594 . + . Parent=GSCOCT00005053001 | |
| 28559 chr1 manual_curation exon 37308452 37309716 . + . Parent=GSCOCT00005053001 | |
| 28560 chr1 manual_curation CDS 37312962 37313177 . + 0 Parent=GSCOCT00005053001 | |
| 28561 chr1 manual_curation CDS 37312204 37312296 . + 0 Parent=GSCOCT00005053001 | |
| 28562 chr1 manual_curation CDS 37311149 37311223 . + 0 Parent=GSCOCT00005053001 | |
| 28563 chr1 manual_curation CDS 37310958 37311041 . + 0 Parent=GSCOCT00005053001 | |
| 28564 chr1 manual_curation CDS 37310515 37310594 . + 1 Parent=GSCOCT00005053001 | |
| 28565 chr1 manual_curation CDS 37309596 37309716 . + 0 Parent=GSCOCT00005053001 | |
| 28566 chr1 manual_curation gene 37313692 37317312 . - . ID=GSCOCG00005052001;Name=Cc01_g20840 | |
| 28567 chr1 manual_curation mRNA 37313692 37317312 . - . ID=GSCOCT00005052001;Parent=GSCOCG00005052001;Name=Cc01_g20840 | |
| 28568 chr1 manual_curation polypeptide 37314887 37317312 . - . ID=GSCOCP00005052001;Dbxref=InterPro:IPR001163,InterPro:IPR006649,InterPro:IPR010920,PFAM:PF01423,SMART:SM00651,SUPERFAMILY:SSF50182,SwissProt:O14036,SwissProt:Q06217,SwissProt:Q18786,SwissProt:Q54NC5;Derives_from=GSCOCT00005052001;Name=Cc01_g20840;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Probable small nuclear ribonucleoprotein Sm D2,CC_functional_completeness:modules,CC_gene:SmD2,CC_gene:snr-4,CC_gene:Snrpd2,CC_gene:SNRPD2,CC_gene:snrpd2,CC_gene:smd2,CC_gene:SMD2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005052001~ Probable small nuclear ribonucleoprotein Sm D2~ SmD2~ modules;original_location=join(876089..876137%2C876197..876322%2C876480..876525%2C876901..876925%2C877885..877959%2C878198..878302%2C878398..878514);owner=coffea | |
| 28569 chr1 manual_curation exon 37313692 37313922 . - . Parent=GSCOCT00005052001 | |
| 28570 chr1 manual_curation exon 37317264 37317312 . - . Parent=GSCOCT00005052001 | |
| 28571 chr1 manual_curation exon 37317079 37317204 . - . Parent=GSCOCT00005052001 | |
| 28572 chr1 manual_curation exon 37316876 37316921 . - . Parent=GSCOCT00005052001 | |
| 28573 chr1 manual_curation exon 37316476 37316500 . - . Parent=GSCOCT00005052001 | |
| 28574 chr1 manual_curation exon 37315442 37315516 . - . Parent=GSCOCT00005052001 | |
| 28575 chr1 manual_curation exon 37315099 37315203 . - . Parent=GSCOCT00005052001 | |
| 28576 chr1 manual_curation exon 37314884 37315003 . - . Parent=GSCOCT00005052001 | |
| 28577 chr1 manual_curation CDS 37317264 37317312 . - 0 Parent=GSCOCT00005052001 | |
| 28578 chr1 manual_curation CDS 37317079 37317204 . - 1 Parent=GSCOCT00005052001 | |
| 28579 chr1 manual_curation CDS 37316876 37316921 . - 1 Parent=GSCOCT00005052001 | |
| 28580 chr1 manual_curation CDS 37316476 37316500 . - 2 Parent=GSCOCT00005052001 | |
| 28581 chr1 manual_curation CDS 37315442 37315516 . - 0 Parent=GSCOCT00005052001 | |
| 28582 chr1 manual_curation CDS 37315099 37315203 . - 0 Parent=GSCOCT00005052001 | |
| 28583 chr1 manual_curation CDS 37314887 37315003 . - 0 Parent=GSCOCT00005052001 | |
| 28584 chr1 manual_curation gene 37318539 37323483 . - . ID=GSCOCG00005051001;Name=Cc01_g20850 | |
| 28585 chr1 manual_curation mRNA 37318539 37323483 . - . ID=GSCOCT00005051001;Parent=GSCOCG00005051001;Name=Cc01_g20850 | |
| 28586 chr1 manual_curation polypeptide 37318807 37323308 . - . ID=GSCOCP00005051001;Dbxref=InterPro:IPR000073,InterPro:IPR022742,PFAM:PF12146,PRINTS:PR00111,SwissProt:O35678,SwissProt:Q8R431,SwissProt:Q99685,TAIR:AT2G39420.1,TAIR:AT2G47630.1,TAIR:AT3G62860.1,TrEMBL:D7U297,TrEMBL:I1HK77,TrEMBL:I1JQM5;Derives_from=GSCOCT00005051001;Name=Cc01_g20850;Ontology_term=CC_evidence_code:ISS,CC_EC_number:3.1.1.23,PRODUCT:Putative Monoglyceride lipase,CC_functional_completeness:complete,CC_gene:MGLL,CC_gene:Mgll;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005051001~ Putative Monoglyceride lipase~ MGLL~ complete;original_location=join(870093..870125%2C870274..870364%2C870455..870487%2C872377..872523%2C872775..872905%2C873501..873638%2C873919..874017%2C874145..874452%2C874510..874594);owner=coffea | |
| 28587 chr1 manual_curation exon 37323276 37323483 . - . Parent=GSCOCT00005051001 | |
| 28588 chr1 manual_curation exon 37323037 37323127 . - . Parent=GSCOCT00005051001 | |
| 28589 chr1 manual_curation exon 37322914 37322946 . - . Parent=GSCOCT00005051001 | |
| 28590 chr1 manual_curation exon 37320878 37321024 . - . Parent=GSCOCT00005051001 | |
| 28591 chr1 manual_curation exon 37320496 37320626 . - . Parent=GSCOCT00005051001 | |
| 28592 chr1 manual_curation exon 37319763 37319900 . - . Parent=GSCOCT00005051001 | |
| 28593 chr1 manual_curation exon 37319384 37319482 . - . Parent=GSCOCT00005051001 | |
| 28594 chr1 manual_curation exon 37318949 37319256 . - . Parent=GSCOCT00005051001 | |
| 28595 chr1 manual_curation exon 37318539 37318891 . - . Parent=GSCOCT00005051001 | |
| 28596 chr1 manual_curation CDS 37323276 37323308 . - 0 Parent=GSCOCT00005051001 | |
| 28597 chr1 manual_curation CDS 37323037 37323127 . - 0 Parent=GSCOCT00005051001 | |
| 28598 chr1 manual_curation CDS 37322914 37322946 . - 1 Parent=GSCOCT00005051001 | |
| 28599 chr1 manual_curation CDS 37320878 37321024 . - 1 Parent=GSCOCT00005051001 | |
| 28600 chr1 manual_curation CDS 37320496 37320626 . - 1 Parent=GSCOCT00005051001 | |
| 28601 chr1 manual_curation CDS 37319763 37319900 . - 0 Parent=GSCOCT00005051001 | |
| 28602 chr1 manual_curation CDS 37319384 37319482 . - 0 Parent=GSCOCT00005051001 | |
| 28603 chr1 manual_curation CDS 37318949 37319256 . - 0 Parent=GSCOCT00005051001 | |
| 28604 chr1 manual_curation CDS 37318807 37318891 . - 2 Parent=GSCOCT00005051001 | |
| 28605 chr1 manual_curation gene 37324073 37327979 . - . ID=GSCOCG00005050001;Name=Cc01_g20860 | |
| 28606 chr1 manual_curation mRNA 37324073 37327979 . - . ID=GSCOCT00005050001;Parent=GSCOCG00005050001;Name=Cc01_g20860 | |
| 28607 chr1 manual_curation polypeptide 37324898 37327914 . - . ID=GSCOCP00005050001;Dbxref=InterPro:IPR003397,PFAM:PF02466,SwissProt:Q9LZH8,TAIR:AT3G62880.1,TrEMBL:B9I9R2,TrEMBL:B9SAS0,TrEMBL:D7U298;Derives_from=GSCOCT00005050001;Name=Cc01_g20860;Ontology_term=CC_evidence_code:ISS,GO:0005743,GO:0008565,GO:0015031,CC_EC_number:missing_EC_number,PRODUCT:Outer envelope pore protein 16-4%2C chloroplastic,CC_functional_completeness:complete,CC_gene:OEP164;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005050001~ Outer envelope pore protein 16-4%2C chloroplastic~ OEP164~ complete;original_location=join(865487..865558%2C865678..865729%2C865826..865857%2C865948..865981%2C866774..866841%2C868375..868503);owner=coffea | |
| 28608 chr1 manual_curation exon 37327843 37327979 . - . Parent=GSCOCT00005050001 | |
| 28609 chr1 manual_curation exon 37327672 37327723 . - . Parent=GSCOCT00005050001 | |
| 28610 chr1 manual_curation exon 37327544 37327575 . - . Parent=GSCOCT00005050001 | |
| 28611 chr1 manual_curation exon 37327420 37327453 . - . Parent=GSCOCT00005050001 | |
| 28612 chr1 manual_curation exon 37326560 37326627 . - . Parent=GSCOCT00005050001 | |
| 28613 chr1 manual_curation exon 37324073 37325026 . - . Parent=GSCOCT00005050001 | |
| 28614 chr1 manual_curation CDS 37327843 37327914 . - 0 Parent=GSCOCT00005050001 | |
| 28615 chr1 manual_curation CDS 37327672 37327723 . - 0 Parent=GSCOCT00005050001 | |
| 28616 chr1 manual_curation CDS 37327544 37327575 . - 1 Parent=GSCOCT00005050001 | |
| 28617 chr1 manual_curation CDS 37327420 37327453 . - 0 Parent=GSCOCT00005050001 | |
| 28618 chr1 manual_curation CDS 37326560 37326627 . - 1 Parent=GSCOCT00005050001 | |
| 28619 chr1 manual_curation CDS 37324898 37325026 . - 0 Parent=GSCOCT00005050001 | |
| 28620 chr1 manual_curation gene 37329106 37330703 . + . ID=GSCOCG00005049001;Name=Cc01_g20870 | |
| 28621 chr1 manual_curation mRNA 37329106 37330703 . + . ID=GSCOCT00005049001;Parent=GSCOCG00005049001;Name=Cc01_g20870 | |
| 28622 chr1 manual_curation polypeptide 37329364 37330311 . + . ID=GSCOCP00005049001;Dbxref=InterPro:IPR002671,PANTHER:PTHR10064,PFAM:PF01776,SwissProt:Q9FE58,SwissProt:Q9M9W1,SwissProt:Q9SRX7,TAIR:AT1G02830.1,TAIR:AT3G05560.1,TAIR:AT5G27770.1,TrEMBL:A9P9A4,TrEMBL:A9PCU0,TrEMBL:A9PD55,TrEMBL:A9S086,TrEMBL:B9RFC4;Derives_from=GSCOCT00005049001;Name=Cc01_g20870;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:60S ribosomal protein L22-2,CC_functional_completeness:complete,CC_gene:RPL22B,CC_gene:RPL22C,CC_gene:RPL22A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005049001~ 60S ribosomal protein L22-2~ RPL22B~ complete;original_location=complement(join(863802..864037%2C863090..863234));owner=coffea | |
| 28623 chr1 manual_curation exon 37329106 37329202 . + . Parent=GSCOCT00005049001 | |
| 28624 chr1 manual_curation exon 37330167 37330703 . + . Parent=GSCOCT00005049001 | |
| 28625 chr1 manual_curation exon 37329334 37329599 . + . Parent=GSCOCT00005049001 | |
| 28626 chr1 manual_curation CDS 37330167 37330311 . + 2 Parent=GSCOCT00005049001 | |
| 28627 chr1 manual_curation CDS 37329364 37329599 . + 0 Parent=GSCOCT00005049001 | |
| 28628 chr1 manual_curation gene 37333857 37337898 . + . ID=GSCOCG00005048001;Name=Cc01_g20880 | |
| 28629 chr1 manual_curation mRNA 37333857 37337898 . + . ID=GSCOCT00005048001;Parent=GSCOCG00005048001;Name=Cc01_g20880 | |
| 28630 chr1 manual_curation polypeptide 37333914 37337898 . + . ID=GSCOCP00005048001;Dbxref=InterPro:IPR004837,PFAM:PF01699,SwissProt:B8K1V7,SwissProt:O22252,SwissProt:Q2R041,TAIR:AT2G47600.1,TrEMBL:B9I9R0,TrEMBL:B9SAS2,TrEMBL:I1L7U8;Derives_from=GSCOCT00005048001;Name=Cc01_g20880;Ontology_term=CC_evidence_code:ISS,GO:0016021,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Magnesium/proton exchanger,CC_functional_completeness:complete,CC_gene:MHX,CC_gene:MHX1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005048001~ Magnesium/proton exchanger~ MHX~ complete;original_location=complement(join(859094..859487%2C858628..858803%2C857836..857954%2C857543..857700%2C856860..856993%2C856132..856348%2C855913..856042%2C855503..855800));owner=coffea | |
| 28631 chr1 manual_curation exon 37337601 37337898 . + . Parent=GSCOCT00005048001 | |
| 28632 chr1 manual_curation exon 37337359 37337488 . + . Parent=GSCOCT00005048001 | |
| 28633 chr1 manual_curation exon 37337053 37337269 . + . Parent=GSCOCT00005048001 | |
| 28634 chr1 manual_curation exon 37336408 37336541 . + . Parent=GSCOCT00005048001 | |
| 28635 chr1 manual_curation exon 37335701 37335858 . + . Parent=GSCOCT00005048001 | |
| 28636 chr1 manual_curation exon 37335447 37335565 . + . Parent=GSCOCT00005048001 | |
| 28637 chr1 manual_curation exon 37334598 37334773 . + . Parent=GSCOCT00005048001 | |
| 28638 chr1 manual_curation exon 37333857 37334307 . + . Parent=GSCOCT00005048001 | |
| 28639 chr1 manual_curation CDS 37337601 37337898 . + 2 Parent=GSCOCT00005048001 | |
| 28640 chr1 manual_curation CDS 37337359 37337488 . + 1 Parent=GSCOCT00005048001 | |
| 28641 chr1 manual_curation CDS 37337053 37337269 . + 0 Parent=GSCOCT00005048001 | |
| 28642 chr1 manual_curation CDS 37336408 37336541 . + 1 Parent=GSCOCT00005048001 | |
| 28643 chr1 manual_curation CDS 37335701 37335858 . + 2 Parent=GSCOCT00005048001 | |
| 28644 chr1 manual_curation CDS 37335447 37335565 . + 0 Parent=GSCOCT00005048001 | |
| 28645 chr1 manual_curation CDS 37334598 37334773 . + 1 Parent=GSCOCT00005048001 | |
| 28646 chr1 manual_curation CDS 37333914 37334307 . + 0 Parent=GSCOCT00005048001 | |
| 28647 chr1 manual_curation gene 37337953 37341889 . - . ID=GSCOCG00005047001;Name=Cc01_g20890 | |
| 28648 chr1 manual_curation mRNA 37337953 37341889 . - . ID=GSCOCT00005047001;Parent=GSCOCG00005047001;Name=Cc01_g20890 | |
| 28649 chr1 manual_curation polypeptide 37338902 37340485 . - . ID=GSCOCP00005047001;Dbxref=InterPro:IPR005101,PFAM:PF03441,SUPERFAMILY:SSF48173,SwissProt:Q4KML2,SwissProt:Q75WS4,SwissProt:Q8LB72,TAIR:AT2G47590.1,TAIR:AT5G24850.1,TrEMBL:B9SAS3,TrEMBL:F6HZ56,TrEMBL:I1L7U6;Derives_from=GSCOCT00005047001;Name=Cc01_g20890;Ontology_term=CC_evidence_code:ISS,GO:0003913,GO:0006281,CC_EC_number:missing_EC_number,PRODUCT:Blue-light photoreceptor PHR2,CC_functional_completeness:fragment,CC_gene:PHR2,CC_gene:cry-dash;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005047001~ Blue-light photoreceptor PHR2~ PHR2~ fragment;original_location=join(852916..853086%2C853845..854074%2C854170..854271%2C854421..854499);owner=coffea | |
| 28650 chr1 manual_curation exon 37340315 37341889 . - . Parent=GSCOCT00005047001 | |
| 28651 chr1 manual_curation exon 37339327 37339556 . - . Parent=GSCOCT00005047001 | |
| 28652 chr1 manual_curation exon 37339130 37339231 . - . Parent=GSCOCT00005047001 | |
| 28653 chr1 manual_curation exon 37337953 37338980 . - . Parent=GSCOCT00005047001 | |
| 28654 chr1 manual_curation CDS 37340315 37340485 . - 0 Parent=GSCOCT00005047001 | |
| 28655 chr1 manual_curation CDS 37339327 37339556 . - 0 Parent=GSCOCT00005047001 | |
| 28656 chr1 manual_curation CDS 37339130 37339231 . - 2 Parent=GSCOCT00005047001 | |
| 28657 chr1 manual_curation CDS 37338902 37338980 . - 2 Parent=GSCOCT00005047001 | |
| 28658 chr1 manual_curation gene 37343071 37345857 . + . ID=GSCOCG00005046001;Name=Cc01_g20900 | |
| 28659 chr1 manual_curation mRNA 37343071 37345857 . + . ID=GSCOCT00005046001;Parent=GSCOCG00005046001;Name=Cc01_g20900 | |
| 28660 chr1 manual_curation polypeptide 37343277 37345706 . + . ID=GSCOCP00005046001;Dbxref=InterPro:IPR007213,PFAM:PF04072,SwissProt:A0QSH4,SwissProt:A0QSH5,TAIR:AT4G02405.1,TrEMBL:A5BKC2,TrEMBL:D7U2A5,TrEMBL:I1NB73;Derives_from=GSCOCT00005046001;Name=Cc01_g20900;Ontology_term=CC_evidence_code:ISS,GO:0008168,CC_EC_number:missing_EC_number,PRODUCT:Putative S-adenosyl-L-methionine-dependent methyltransferases superfamily protein,CC_functional_completeness:complete,CC_gene:MSMEG_1481,CC_gene:MSMEG_1480;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005046001~ Putative S-adenosyl-L-methionine-dependent methyltransferases superfamily protein~ MSMEG_1481~ complete;original_location=complement(join(849959..850124%2C849363..849538%2C849160..849280%2C848923..849047%2C848310..848438%2C848067..848231%2C847695..847766));owner=coffea | |
| 28661 chr1 manual_curation exon 37345635 37345857 . + . Parent=GSCOCT00005046001 | |
| 28662 chr1 manual_curation exon 37345170 37345334 . + . Parent=GSCOCT00005046001 | |
| 28663 chr1 manual_curation exon 37344963 37345091 . + . Parent=GSCOCT00005046001 | |
| 28664 chr1 manual_curation exon 37344354 37344478 . + . Parent=GSCOCT00005046001 | |
| 28665 chr1 manual_curation exon 37344121 37344241 . + . Parent=GSCOCT00005046001 | |
| 28666 chr1 manual_curation exon 37343863 37344038 . + . Parent=GSCOCT00005046001 | |
| 28667 chr1 manual_curation exon 37343071 37343442 . + . Parent=GSCOCT00005046001 | |
| 28668 chr1 manual_curation CDS 37345635 37345706 . + 0 Parent=GSCOCT00005046001 | |
| 28669 chr1 manual_curation CDS 37345170 37345334 . + 0 Parent=GSCOCT00005046001 | |
| 28670 chr1 manual_curation CDS 37344963 37345091 . + 0 Parent=GSCOCT00005046001 | |
| 28671 chr1 manual_curation CDS 37344354 37344478 . + 1 Parent=GSCOCT00005046001 | |
| 28672 chr1 manual_curation CDS 37344121 37344241 . + 0 Parent=GSCOCT00005046001 | |
| 28673 chr1 manual_curation CDS 37343863 37344038 . + 1 Parent=GSCOCT00005046001 | |
| 28674 chr1 manual_curation CDS 37343277 37343442 . + 0 Parent=GSCOCT00005046001 | |
| 28675 chr1 manual_curation gene 37346033 37353689 . - . ID=GSCOCG00005045001;Name=Cc01_g20910 | |
| 28676 chr1 manual_curation mRNA 37346033 37353689 . - . ID=GSCOCT00005045001;Parent=GSCOCG00005045001;Name=Cc01_g20910 | |
| 28677 chr1 manual_curation polypeptide 37346284 37353639 . - . ID=GSCOCP00005045001;Dbxref=InterPro:IPR007259,PANTHER:PTHR19302,PFAM:PF04130,SwissProt:Q9M350,SwissProt:Q9SC88,SwissProt:Q9UGJ1,TAIR:AT3G53760.1,TAIR:AT5G06680.1,TAIR:AT5G17410.2,TrEMBL:B9I9Q8,TrEMBL:B9SAS5,TrEMBL:D7U2A6;Derives_from=GSCOCT00005045001;Name=Cc01_g20910;Ontology_term=CC_evidence_code:ISS,GO:0000226,GO:0000922,GO:0005815,CC_EC_number:missing_EC_number,PRODUCT:Gamma-tubulin complex component 4 homolog,CC_functional_completeness:complete,CC_gene:At3g53760,CC_gene:85P,CC_gene:TUBGCP4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005045001~ Gamma-tubulin complex component 4 homolog~ At3g53760~ complete;original_location=join(839762..839934%2C840222..840513%2C840596..840732%2C841080..841178%2C841390..841507%2C842040..842312%2C842475..842555%2C842625..842708%2C843172..843258%2C843781..843836%2C843936..844130%2C844505..844730%2C845421..845509%2C846285..846438%2C846852..846974%2C847055..847117);owner=coffea | |
| 28678 chr1 manual_curation exon 37353467 37353689 . - . Parent=GSCOCT00005045001 | |
| 28679 chr1 manual_curation exon 37352888 37353179 . - . Parent=GSCOCT00005045001 | |
| 28680 chr1 manual_curation exon 37352669 37352805 . - . Parent=GSCOCT00005045001 | |
| 28681 chr1 manual_curation exon 37352223 37352321 . - . Parent=GSCOCT00005045001 | |
| 28682 chr1 manual_curation exon 37351894 37352011 . - . Parent=GSCOCT00005045001 | |
| 28683 chr1 manual_curation exon 37351089 37351361 . - . Parent=GSCOCT00005045001 | |
| 28684 chr1 manual_curation exon 37350846 37350926 . - . Parent=GSCOCT00005045001 | |
| 28685 chr1 manual_curation exon 37350693 37350776 . - . Parent=GSCOCT00005045001 | |
| 28686 chr1 manual_curation exon 37350143 37350229 . - . Parent=GSCOCT00005045001 | |
| 28687 chr1 manual_curation exon 37349565 37349620 . - . Parent=GSCOCT00005045001 | |
| 28688 chr1 manual_curation exon 37349271 37349465 . - . Parent=GSCOCT00005045001 | |
| 28689 chr1 manual_curation exon 37348671 37348896 . - . Parent=GSCOCT00005045001 | |
| 28690 chr1 manual_curation exon 37347892 37347980 . - . Parent=GSCOCT00005045001 | |
| 28691 chr1 manual_curation exon 37346963 37347116 . - . Parent=GSCOCT00005045001 | |
| 28692 chr1 manual_curation exon 37346427 37346549 . - . Parent=GSCOCT00005045001 | |
| 28693 chr1 manual_curation exon 37346033 37346346 . - . Parent=GSCOCT00005045001 | |
| 28694 chr1 manual_curation CDS 37353467 37353639 . - 0 Parent=GSCOCT00005045001 | |
| 28695 chr1 manual_curation CDS 37352888 37353179 . - 2 Parent=GSCOCT00005045001 | |
| 28696 chr1 manual_curation CDS 37352669 37352805 . - 0 Parent=GSCOCT00005045001 | |
| 28697 chr1 manual_curation CDS 37352223 37352321 . - 2 Parent=GSCOCT00005045001 | |
| 28698 chr1 manual_curation CDS 37351894 37352011 . - 2 Parent=GSCOCT00005045001 | |
| 28699 chr1 manual_curation CDS 37351089 37351361 . - 0 Parent=GSCOCT00005045001 | |
| 28700 chr1 manual_curation CDS 37350846 37350926 . - 0 Parent=GSCOCT00005045001 | |
| 28701 chr1 manual_curation CDS 37350693 37350776 . - 0 Parent=GSCOCT00005045001 | |
| 28702 chr1 manual_curation CDS 37350143 37350229 . - 0 Parent=GSCOCT00005045001 | |
| 28703 chr1 manual_curation CDS 37349565 37349620 . - 0 Parent=GSCOCT00005045001 | |
| 28704 chr1 manual_curation CDS 37349271 37349465 . - 2 Parent=GSCOCT00005045001 | |
| 28705 chr1 manual_curation CDS 37348671 37348896 . - 2 Parent=GSCOCT00005045001 | |
| 28706 chr1 manual_curation CDS 37347892 37347980 . - 0 Parent=GSCOCT00005045001 | |
| 28707 chr1 manual_curation CDS 37346963 37347116 . - 2 Parent=GSCOCT00005045001 | |
| 28708 chr1 manual_curation CDS 37346427 37346549 . - 0 Parent=GSCOCT00005045001 | |
| 28709 chr1 manual_curation CDS 37346284 37346346 . - 0 Parent=GSCOCT00005045001 | |
| 28710 chr1 manual_curation gene 37354481 37359716 . - . ID=GSCOCG00005044001;Name=Cc01_g20920 | |
| 28711 chr1 manual_curation mRNA 37354481 37359716 . - . ID=GSCOCT00005044001;Parent=GSCOCG00005044001;Name=Cc01_g20920 | |
| 28712 chr1 manual_curation polypeptide 37354967 37359590 . - . ID=GSCOCP00005044001;Dbxref=InterPro:IPR006709,PANTHER:PTHR14150,PFAM:PF04615,SwissProt:P87137,SwissProt:Q04500,SwissProt:Q640M1,TAIR:AT4G02400.1,TAIR:AT5G08600.2,TrEMBL:A5BKC3,TrEMBL:B9SAS6,TrEMBL:D7U2A7;Derives_from=GSCOCT00005044001;Name=Cc01_g20920;Ontology_term=CC_evidence_code:ISS,GO:0006364,GO:0032040,CC_EC_number:missing_EC_number,PRODUCT:U3 ribonucleoprotein (Utp) family protein,CC_functional_completeness:complete,CC_gene:SPAC57A7.06,CC_gene:Utp14a,CC_gene:UTP14;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005044001~ U3 ribonucleoprotein (Utp) family protein~ SPAC57A7.06~ complete;original_location=join(833811..834146%2C834449..834590%2C835032..835510%2C835656..835877%2C836004..836324%2C836466..836822%2C836936..837016%2C837107..837202%2C837295..837666%2C837974..838105%2C838279..838434);owner=coffea | |
| 28713 chr1 manual_curation exon 37359255 37359716 . - . Parent=GSCOCT00005044001 | |
| 28714 chr1 manual_curation exon 37358811 37358952 . - . Parent=GSCOCT00005044001 | |
| 28715 chr1 manual_curation exon 37357891 37358369 . - . Parent=GSCOCT00005044001 | |
| 28716 chr1 manual_curation exon 37357524 37357745 . - . Parent=GSCOCT00005044001 | |
| 28717 chr1 manual_curation exon 37357077 37357397 . - . Parent=GSCOCT00005044001 | |
| 28718 chr1 manual_curation exon 37356579 37356935 . - . Parent=GSCOCT00005044001 | |
| 28719 chr1 manual_curation exon 37356385 37356465 . - . Parent=GSCOCT00005044001 | |
| 28720 chr1 manual_curation exon 37356199 37356294 . - . Parent=GSCOCT00005044001 | |
| 28721 chr1 manual_curation exon 37355735 37356106 . - . Parent=GSCOCT00005044001 | |
| 28722 chr1 manual_curation exon 37355296 37355427 . - . Parent=GSCOCT00005044001 | |
| 28723 chr1 manual_curation exon 37354481 37355122 . - . Parent=GSCOCT00005044001 | |
| 28724 chr1 manual_curation CDS 37359255 37359590 . - 0 Parent=GSCOCT00005044001 | |
| 28725 chr1 manual_curation CDS 37358811 37358952 . - 0 Parent=GSCOCT00005044001 | |
| 28726 chr1 manual_curation CDS 37357891 37358369 . - 1 Parent=GSCOCT00005044001 | |
| 28727 chr1 manual_curation CDS 37357524 37357745 . - 0 Parent=GSCOCT00005044001 | |
| 28728 chr1 manual_curation CDS 37357077 37357397 . - 0 Parent=GSCOCT00005044001 | |
| 28729 chr1 manual_curation CDS 37356579 37356935 . - 0 Parent=GSCOCT00005044001 | |
| 28730 chr1 manual_curation CDS 37356385 37356465 . - 0 Parent=GSCOCT00005044001 | |
| 28731 chr1 manual_curation CDS 37356199 37356294 . - 0 Parent=GSCOCT00005044001 | |
| 28732 chr1 manual_curation CDS 37355735 37356106 . - 0 Parent=GSCOCT00005044001 | |
| 28733 chr1 manual_curation CDS 37355296 37355427 . - 0 Parent=GSCOCT00005044001 | |
| 28734 chr1 manual_curation CDS 37354967 37355122 . - 0 Parent=GSCOCT00005044001 | |
| 28735 chr1 manual_curation gene 37364905 37372324 . + . ID=GSCOCG00005043001;Name=Cc01_g20930 | |
| 28736 chr1 manual_curation mRNA 37364905 37372324 . + . ID=GSCOCT00005043001;Parent=GSCOCG00005043001;Name=Cc01_g20930 | |
| 28737 chr1 manual_curation polypeptide 37364957 37371943 . + . ID=GSCOCP00005043001;Dbxref=GENE3D:G3DSA:1.20.142.10,InterPro:IPR003034,InterPro:IPR004102,InterPro:IPR008893,InterPro:IPR012317,PFAM:PF00644,PFAM:PF02037,PFAM:PF02877,PFAM:PF05406,PROFILE:PS50800,PROFILE:PS51059,PROFILE:PS51060,SMART:SM00513,SMART:SM00773,SUPERFAMILY:SSF47587,SwissProt:O50017,SwissProt:Q11207,SwissProt:Q5Z8Q9,TAIR:AT2G31320.1,TAIR:AT4G02390.1,TAIR:AT5G22470.1,TrEMBL:C5XJW6,TrEMBL:D7M416,TrEMBL:I1NMX7;Derives_from=GSCOCT00005043001;Name=Cc01_g20930;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0003950,GO:0006471,CC_EC_number:2.4.2.30,PRODUCT:Poly [ADP-ribose] polymerase 2,CC_functional_completeness:complete,CC_gene:PARP2,CC_gene:PARP2-A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005043001~ Poly [ADP-ribose] polymerase 2~ PARP2~ complete;original_location=complement(join(828361..828444%2C827951..828239%2C827763..827863%2C827577..827661%2C827144..827379%2C826777..826903%2C826026..826081%2C824860..824933%2C824698..824744%2C824440..824489%2C824112..824174%2C822882..822962%2C822546..822656%2C822347..822422%2C822117..822259%2C821840..821913%2C821636..821738%2C821458..821550));owner=coffea | |
| 28738 chr1 manual_curation exon 37371851 37372324 . + . Parent=GSCOCT00005043001 | |
| 28739 chr1 manual_curation exon 37371663 37371765 . + . Parent=GSCOCT00005043001 | |
| 28740 chr1 manual_curation exon 37371488 37371561 . + . Parent=GSCOCT00005043001 | |
| 28741 chr1 manual_curation exon 37371142 37371284 . + . Parent=GSCOCT00005043001 | |
| 28742 chr1 manual_curation exon 37370979 37371054 . + . Parent=GSCOCT00005043001 | |
| 28743 chr1 manual_curation exon 37370745 37370855 . + . Parent=GSCOCT00005043001 | |
| 28744 chr1 manual_curation exon 37370439 37370519 . + . Parent=GSCOCT00005043001 | |
| 28745 chr1 manual_curation exon 37369227 37369289 . + . Parent=GSCOCT00005043001 | |
| 28746 chr1 manual_curation exon 37368912 37368961 . + . Parent=GSCOCT00005043001 | |
| 28747 chr1 manual_curation exon 37368657 37368703 . + . Parent=GSCOCT00005043001 | |
| 28748 chr1 manual_curation exon 37368468 37368541 . + . Parent=GSCOCT00005043001 | |
| 28749 chr1 manual_curation exon 37367320 37367375 . + . Parent=GSCOCT00005043001 | |
| 28750 chr1 manual_curation exon 37366498 37366624 . + . Parent=GSCOCT00005043001 | |
| 28751 chr1 manual_curation exon 37366022 37366257 . + . Parent=GSCOCT00005043001 | |
| 28752 chr1 manual_curation exon 37365740 37365824 . + . Parent=GSCOCT00005043001 | |
| 28753 chr1 manual_curation exon 37365538 37365638 . + . Parent=GSCOCT00005043001 | |
| 28754 chr1 manual_curation exon 37365162 37365450 . + . Parent=GSCOCT00005043001 | |
| 28755 chr1 manual_curation exon 37364905 37365040 . + . Parent=GSCOCT00005043001 | |
| 28756 chr1 manual_curation CDS 37371851 37371943 . + 0 Parent=GSCOCT00005043001 | |
| 28757 chr1 manual_curation CDS 37371663 37371765 . + 2 Parent=GSCOCT00005043001 | |
| 28758 chr1 manual_curation CDS 37371488 37371561 . + 0 Parent=GSCOCT00005043001 | |
| 28759 chr1 manual_curation CDS 37371142 37371284 . + 1 Parent=GSCOCT00005043001 | |
| 28760 chr1 manual_curation CDS 37370979 37371054 . + 0 Parent=GSCOCT00005043001 | |
| 28761 chr1 manual_curation CDS 37370745 37370855 . + 0 Parent=GSCOCT00005043001 | |
| 28762 chr1 manual_curation CDS 37370439 37370519 . + 0 Parent=GSCOCT00005043001 | |
| 28763 chr1 manual_curation CDS 37369227 37369289 . + 0 Parent=GSCOCT00005043001 | |
| 28764 chr1 manual_curation CDS 37368912 37368961 . + 1 Parent=GSCOCT00005043001 | |
| 28765 chr1 manual_curation CDS 37368657 37368703 . + 2 Parent=GSCOCT00005043001 | |
| 28766 chr1 manual_curation CDS 37368468 37368541 . + 0 Parent=GSCOCT00005043001 | |
| 28767 chr1 manual_curation CDS 37367320 37367375 . + 1 Parent=GSCOCT00005043001 | |
| 28768 chr1 manual_curation CDS 37366498 37366624 . + 0 Parent=GSCOCT00005043001 | |
| 28769 chr1 manual_curation CDS 37366022 37366257 . + 1 Parent=GSCOCT00005043001 | |
| 28770 chr1 manual_curation CDS 37365740 37365824 . + 0 Parent=GSCOCT00005043001 | |
| 28771 chr1 manual_curation CDS 37365538 37365638 . + 1 Parent=GSCOCT00005043001 | |
| 28772 chr1 manual_curation CDS 37365162 37365450 . + 0 Parent=GSCOCT00005043001 | |
| 28773 chr1 manual_curation CDS 37364957 37365040 . + 0 Parent=GSCOCT00005043001 | |
| 28774 chr1 manual_curation gene 37373056 37375543 . + . ID=GSCOCG00005042001;Name=Cc01_g20940 | |
| 28775 chr1 manual_curation mRNA 37373056 37375543 . + . ID=GSCOCT00005042001;Parent=GSCOCG00005042001;Name=Cc01_g20940 | |
| 28776 chr1 manual_curation polypeptide 37374051 37375327 . + . ID=GSCOCP00005042001;Dbxref=TAIR:AT3G52860.1,TrEMBL:B9SAT0,TrEMBL:F6HZ57,TrEMBL:I1K4T1;Derives_from=GSCOCT00005042001;Name=Cc01_g20940;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B Has 86 Blast hits to 86 proteins in 36 species,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005042001~ unknown protein%3B Has 86 Blast hits to 86 proteins in 36 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 41%3B Fungi - 13%3B Plants - 26%3B Viruses - 0%3B Other Eukaryotes - 4 (source: NCBI BLink).~ unknown_gene~ fragment;original_location=complement(join(819176..819350%2C818392..818504%2C818074..818208));owner=coffea | |
| 28777 chr1 manual_curation exon 37373056 37373256 . + . Parent=GSCOCT00005042001 | |
| 28778 chr1 manual_curation exon 37375193 37375543 . + . Parent=GSCOCT00005042001 | |
| 28779 chr1 manual_curation exon 37374897 37375009 . + . Parent=GSCOCT00005042001 | |
| 28780 chr1 manual_curation exon 37373974 37374225 . + . Parent=GSCOCT00005042001 | |
| 28781 chr1 manual_curation CDS 37375193 37375327 . + 0 Parent=GSCOCT00005042001 | |
| 28782 chr1 manual_curation CDS 37374897 37375009 . + 1 Parent=GSCOCT00005042001 | |
| 28783 chr1 manual_curation CDS 37374051 37374225 . + 0 Parent=GSCOCT00005042001 | |
| 28784 chr1 manual_curation gene 37375680 37378445 . - . ID=GSCOCG00005041001;Name=Cc01_g20950 | |
| 28785 chr1 manual_curation mRNA 37375680 37378445 . - . ID=GSCOCT00005041001;Parent=GSCOCG00005041001;Name=Cc01_g20950 | |
| 28786 chr1 manual_curation polypeptide 37375928 37378316 . - . ID=GSCOCP00005041001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR012677,PFAM:PF00076,PROFILE:PS50102,SMART:SM00360,SwissProt:A2Y0J7,SwissProt:Q0DKM4,SwissProt:Q39244,TAIR:AT1G06960.1,TAIR:AT2G30260.1,TAIR:AT2G47580.1,TrEMBL:A9PEB3,TrEMBL:B7FJ52,TrEMBL:B9GSB4;Derives_from=GSCOCT00005041001;Name=Cc01_g20950;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,CC_EC_number:missing_EC_number,PRODUCT:U1 small nuclear ribonucleoprotein A,CC_functional_completeness:complete,CC_gene:U1A,CC_gene:Os05g0154800,CC_gene:OsI_18512;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005041001~ U1 small nuclear ribonucleoprotein A~ U1A~ complete;original_location=join(815085..815178%2C815302..815474%2C815660..815753%2C816002..816090%2C817180..817473);owner=coffea | |
| 28787 chr1 manual_curation exon 37378223 37378445 . - . Parent=GSCOCT00005041001 | |
| 28788 chr1 manual_curation exon 37377927 37378099 . - . Parent=GSCOCT00005041001 | |
| 28789 chr1 manual_curation exon 37377648 37377741 . - . Parent=GSCOCT00005041001 | |
| 28790 chr1 manual_curation exon 37377311 37377399 . - . Parent=GSCOCT00005041001 | |
| 28791 chr1 manual_curation exon 37375680 37376221 . - . Parent=GSCOCT00005041001 | |
| 28792 chr1 manual_curation CDS 37378223 37378316 . - 0 Parent=GSCOCT00005041001 | |
| 28793 chr1 manual_curation CDS 37377927 37378099 . - 1 Parent=GSCOCT00005041001 | |
| 28794 chr1 manual_curation CDS 37377648 37377741 . - 0 Parent=GSCOCT00005041001 | |
| 28795 chr1 manual_curation CDS 37377311 37377399 . - 1 Parent=GSCOCT00005041001 | |
| 28796 chr1 manual_curation CDS 37375928 37376221 . - 0 Parent=GSCOCT00005041001 | |
| 28797 chr1 manual_curation gene 37381480 37382076 . - . ID=GSCOCG00005040001;Name=Cc01_g20960 | |
| 28798 chr1 manual_curation mRNA 37381480 37382076 . - . ID=GSCOCT00005040001;Parent=GSCOCG00005040001;Name=Cc01_g20960 | |
| 28799 chr1 manual_curation polypeptide 37381480 37382076 . - . ID=GSCOCP00005040001;Dbxref=InterPro:IPR007857,PFAM:PF05185,SwissProt:A2X0Q3,SwissProt:Q6YXZ7,SwissProt:Q8GWT4,TAIR:AT4G31120.1,TrEMBL:A5C1N4,TrEMBL:D7MBI8,TrEMBL:D7SU76;Derives_from=GSCOCT00005040001;Name=Cc01_g20960;Ontology_term=CC_evidence_code:ISS,GO:0005737,GO:0008168,CC_EC_number:missing_EC_number,PRODUCT:Putative Skb1 methyltransferase,CC_functional_completeness:complete,CC_gene:PMRT15,CC_gene:PRMT5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005040001~ Putative Skb1 methyltransferase~ PMRT15~ complete;original_location=join(811325..811407%2C811498..811591%2C811838..811921);owner=coffea | |
| 28800 chr1 manual_curation exon 37381994 37382076 . - . Parent=GSCOCT00005040001 | |
| 28801 chr1 manual_curation exon 37381810 37381903 . - . Parent=GSCOCT00005040001 | |
| 28802 chr1 manual_curation exon 37381480 37381563 . - . Parent=GSCOCT00005040001 | |
| 28803 chr1 manual_curation CDS 37381994 37382076 . - 0 Parent=GSCOCT00005040001 | |
| 28804 chr1 manual_curation CDS 37381810 37381903 . - 2 Parent=GSCOCT00005040001 | |
| 28805 chr1 manual_curation CDS 37381480 37381563 . - 0 Parent=GSCOCT00005040001 | |
| 28806 chr1 manual_curation gene 37383407 37384561 . + . ID=GSCOCG00005039001;Name=Cc01_g20970 | |
| 28807 chr1 manual_curation mRNA 37383407 37384561 . + . ID=GSCOCT00005039001;Parent=GSCOCG00005039001;Name=Cc01_g20970 | |
| 28808 chr1 manual_curation polypeptide 37383731 37384172 . + . ID=GSCOCP00005039001;Dbxref=InterPro:IPR004926,PFAM:PF03242,SwissProt:P46521,SwissProt:P46522,SwissProt:Q39644,TAIR:AT1G02820.1,TAIR:AT4G02380.1,TAIR:AT4G15910.1,TrEMBL:G9HVM5,TrEMBL:O65149,TrEMBL:Q42475;Derives_from=GSCOCT00005039001;Name=Cc01_g20970;Ontology_term=CC_evidence_code:ISS,GO:0006950,CC_EC_number:missing_EC_number,PRODUCT:Late embryogenesis abundant protein Lea5,CC_functional_completeness:complete,CC_gene:LEA5,CC_gene:LEA5-D,CC_gene:LEA5-A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005039001~ Late embryogenesis abundant protein Lea5~ LEA5~ complete;original_location=complement(join(809591..809670%2C809229..809448));owner=coffea | |
| 28809 chr1 manual_curation exon 37383953 37384561 . + . Parent=GSCOCT00005039001 | |
| 28810 chr1 manual_curation exon 37383407 37383810 . + . Parent=GSCOCT00005039001 | |
| 28811 chr1 manual_curation CDS 37383953 37384172 . + 2 Parent=GSCOCT00005039001 | |
| 28812 chr1 manual_curation CDS 37383731 37383810 . + 0 Parent=GSCOCT00005039001 | |
| 28813 chr1 manual_curation gene 37385986 37387873 . - . ID=GSCOCG00005037001;Name=Cc01_g20980 | |
| 28814 chr1 manual_curation mRNA 37385986 37387873 . - . ID=GSCOCT00005037001;Parent=GSCOCG00005037001;Name=Cc01_g20980 | |
| 28815 chr1 manual_curation polypeptide 37387124 37387633 . - . ID=GSCOCP00005037001;Dbxref=GENE3D:G3DSA:2.30.240.10,InterPro:IPR007493,PFAM:PF04398,SwissProt:Q9M015,TAIR:AT1G02816.1,TAIR:AT4G02360.1,TAIR:AT4G02370.1,TrEMBL:A5B257,TrEMBL:F6HZ58,TrEMBL:Q9SRX5;Derives_from=GSCOCT00005037001;Name=Cc01_g20980;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function%2C DUF538,CC_functional_completeness:complete,CC_gene:At5g01610;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005037001~ Protein of unknown function%2C DUF538~ At5g01610~ complete;original_location=805768..806277;owner=coffea | |
| 28816 chr1 manual_curation exon 37385986 37386186 . - . Parent=GSCOCT00005037001 | |
| 28817 chr1 manual_curation exon 37387082 37387873 . - . Parent=GSCOCT00005037001 | |
| 28818 chr1 manual_curation CDS 37387124 37387633 . - 0 Parent=GSCOCT00005037001 | |
| 28819 chr1 manual_curation gene 37388379 37389613 . - . ID=GSCOCG00005036001;Name=Cc01_g20990 | |
| 28820 chr1 manual_curation mRNA 37388379 37389613 . - . ID=GSCOCT00005036001;Parent=GSCOCG00005036001;Name=Cc01_g20990 | |
| 28821 chr1 manual_curation polypeptide 37388703 37389167 . - . ID=GSCOCP00005036001;Dbxref=GENE3D:G3DSA:2.30.240.10,InterPro:IPR007493,PFAM:PF04398,TAIR:AT1G02816.1,TAIR:AT4G02360.1,TAIR:AT4G02370.1,TrEMBL:A9PCC0,TrEMBL:B9I9Q1,TrEMBL:B9SAT4;Derives_from=GSCOCT00005036001;Name=Cc01_g20990;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function%2C DUF538,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005036001~ Protein of unknown function%2C DUF538~ unknown_gene~ fragment;original_location=804234..804698;owner=coffea | |
| 28822 chr1 manual_curation exon 37389383 37389613 . - . Parent=GSCOCT00005036001 | |
| 28823 chr1 manual_curation exon 37388379 37389261 . - . Parent=GSCOCT00005036001 | |
| 28824 chr1 manual_curation CDS 37388703 37389167 . - 0 Parent=GSCOCT00005036001 | |
| 28825 chr1 manual_curation gene 37398066 37400581 . - . ID=GSCOCG00005033001;Name=Cc01_g21000 | |
| 28826 chr1 manual_curation mRNA 37398066 37400581 . - . ID=GSCOCT00005033001;Parent=GSCOCG00005033001;Name=Cc01_g21000 | |
| 28827 chr1 manual_curation polypeptide 37398066 37400483 . - . ID=GSCOCP00005033001;Dbxref=InterPro:IPR007225,PANTHER:PTHR12702,PFAM:PF04091,PIR:PIRSF025007,SwissProt:A6H5Z3,SwissProt:Q9LXX6,SwissProt:Q9Y2D4,TAIR:AT3G56640.1,TAIR:AT4G02350.1,TrEMBL:B9GSB7,TrEMBL:B9SAT6,TrEMBL:F6HZ59;Derives_from=GSCOCT00005033001;Name=Cc01_g21000;Ontology_term=CC_evidence_code:ISS,GO:0000145,GO:0006904,CC_EC_number:missing_EC_number,PRODUCT:Probable exocyst complex component 6,CC_functional_completeness:complete,CC_gene:At3g56640,CC_gene:Exoc6b,CC_gene:EXOC6B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005033001~ Probable exocyst complex component 6~ At3g56640~ complete;original_location=792918..795335;owner=coffea | |
| 28828 chr1 manual_curation exon 37398066 37400581 . - . Parent=GSCOCT00005033001 | |
| 28829 chr1 manual_curation CDS 37398066 37400483 . - 0 Parent=GSCOCT00005033001 | |
| 28830 chr1 manual_curation gene 37403721 37406161 . + . ID=GSCOCG00005032001;Name=Cc01_g21010 | |
| 28831 chr1 manual_curation mRNA 37403721 37406161 . + . ID=GSCOCT00005032001;Parent=GSCOCG00005032001;Name=Cc01_g21010 | |
| 28832 chr1 manual_curation polypeptide 37403721 37405771 . + . ID=GSCOCP00005032001;Dbxref=InterPro:IPR000039,InterPro:IPR021131,PANTHER:PTHR10934,PFAM:PF00828,SUPERFAMILY:SSF52080,SwissProt:O65729,SwissProt:P42791,SwissProt:Q940B0,TAIR:AT2G47570.1,TAIR:AT3G05590.1,TAIR:AT5G27850.1,TrEMBL:B9RFD6;Derives_from=GSCOCT00005032001;Name=Cc01_g21010;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:60S ribosomal protein L18-3,CC_functional_completeness:complete,CC_gene:RPL18C,CC_gene:RPL18B,CC_gene:RPL18;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005032001~ 60S ribosomal protein L18-3~ RPL18C~ complete;original_location=complement(join(789653..789680%2C789458..789573%2C789093..789311%2C788517..788699%2C787630..787788));owner=coffea | |
| 28833 chr1 manual_curation exon 37405613 37406161 . + . Parent=GSCOCT00005032001 | |
| 28834 chr1 manual_curation exon 37404702 37404884 . + . Parent=GSCOCT00005032001 | |
| 28835 chr1 manual_curation exon 37404090 37404308 . + . Parent=GSCOCT00005032001 | |
| 28836 chr1 manual_curation exon 37403828 37403943 . + . Parent=GSCOCT00005032001 | |
| 28837 chr1 manual_curation exon 37403721 37403748 . + . Parent=GSCOCT00005032001 | |
| 28838 chr1 manual_curation CDS 37405613 37405771 . + 0 Parent=GSCOCT00005032001 | |
| 28839 chr1 manual_curation CDS 37404702 37404884 . + 0 Parent=GSCOCT00005032001 | |
| 28840 chr1 manual_curation CDS 37404090 37404308 . + 0 Parent=GSCOCT00005032001 | |
| 28841 chr1 manual_curation CDS 37403828 37403943 . + 1 Parent=GSCOCT00005032001 | |
| 28842 chr1 manual_curation CDS 37403721 37403748 . + 0 Parent=GSCOCT00005032001 | |
| 28843 chr1 manual_curation gene 37407722 37410492 . + . ID=GSCOCG00005031001;Name=Cc01_g21020 | |
| 28844 chr1 manual_curation mRNA 37407722 37410492 . + . ID=GSCOCT00005031001;Parent=GSCOCG00005031001;Name=Cc01_g21020 | |
| 28845 chr1 manual_curation polypeptide 37407866 37410227 . + . ID=GSCOCP00005031001;Dbxref=InterPro:IPR000073,InterPro:IPR000639,PFAM:PF00561,PRINTS:PR00111,PRINTS:PR00412,SwissProt:P34913,SwissProt:P34914,SwissProt:P80299,TAIR:AT3G05600.1,TAIR:AT4G02340.1,TAIR:AT4G15960.1,TrEMBL:B9I9P8,TrEMBL:F6HZ61,TrEMBL:I1NB78;Derives_from=GSCOCT00005031001;Name=Cc01_g21020;Ontology_term=CC_evidence_code:ISS,GO:0003824,CC_EC_number:3.3.2.3,PRODUCT:Putative Epoxide hydrolase 2,CC_functional_completeness:fragment,CC_gene:EPHX2,CC_gene:Ephx2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005031001~ Putative Epoxide hydrolase 2~ EPHX2~ fragment;original_location=complement(join(785071..785535%2C783874..784115%2C783174..783420));owner=coffea | |
| 28846 chr1 manual_curation exon 37409981 37410492 . + . Parent=GSCOCT00005031001 | |
| 28847 chr1 manual_curation exon 37409286 37409527 . + . Parent=GSCOCT00005031001 | |
| 28848 chr1 manual_curation exon 37407722 37408330 . + . Parent=GSCOCT00005031001 | |
| 28849 chr1 manual_curation CDS 37409981 37410227 . + 2 Parent=GSCOCT00005031001 | |
| 28850 chr1 manual_curation CDS 37409286 37409527 . + 0 Parent=GSCOCT00005031001 | |
| 28851 chr1 manual_curation CDS 37407866 37408330 . + 0 Parent=GSCOCT00005031001 | |
| 28852 chr1 manual_curation gene 37410662 37413819 . - . ID=GSCOCG00005030001;Name=Cc01_g21030 | |
| 28853 chr1 manual_curation mRNA 37410662 37413819 . - . ID=GSCOCT00005030001;Parent=GSCOCG00005030001;Name=Cc01_g21030 | |
| 28854 chr1 manual_curation polypeptide 37411068 37413666 . - . ID=GSCOCP00005030001;Dbxref=InterPro:IPR000073,InterPro:IPR000639,PFAM:PF00561,PRINTS:PR00111,PRINTS:PR00412,SwissProt:P34913,SwissProt:P80299,SwissProt:Q6Q2C2,TAIR:AT3G05600.1,TAIR:AT4G02340.1,TAIR:AT4G15960.1,TrEMBL:D8L7V8,TrEMBL:F6HZ61,TrEMBL:I1NB78;Derives_from=GSCOCT00005030001;Name=Cc01_g21030;Ontology_term=CC_evidence_code:ISS,GO:0003824,CC_EC_number:3.3.2.3,PRODUCT:Putative Epoxide hydrolase 2,CC_functional_completeness:fragment,CC_gene:EPHX2,CC_gene:Ephx2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005030001~ Putative Epoxide hydrolase 2~ EPHX2~ fragment;original_location=join(779735..780208%2C781537..781778%2C782087..782333);owner=coffea | |
| 28855 chr1 manual_curation exon 37413193 37413819 . - . Parent=GSCOCT00005030001 | |
| 28856 chr1 manual_curation exon 37411623 37411864 . - . Parent=GSCOCT00005030001 | |
| 28857 chr1 manual_curation exon 37410662 37411314 . - . Parent=GSCOCT00005030001 | |
| 28858 chr1 manual_curation CDS 37413193 37413666 . - 0 Parent=GSCOCT00005030001 | |
| 28859 chr1 manual_curation CDS 37411623 37411864 . - 0 Parent=GSCOCT00005030001 | |
| 28860 chr1 manual_curation CDS 37411068 37411314 . - 2 Parent=GSCOCT00005030001 | |
| 28861 chr1 manual_curation gene 37430599 37434127 . + . ID=GSCOCG00005028001;Name=Cc01_g21040 | |
| 28862 chr1 manual_curation mRNA 37430599 37434127 . + . ID=GSCOCT00005028001;Parent=GSCOCG00005028001;Name=Cc01_g21040 | |
| 28863 chr1 manual_curation polypeptide 37430724 37433105 . + . ID=GSCOCP00005028001;Dbxref=GENE3D:G3DSA:1.50.10.10,InterPro:IPR001701,InterPro:IPR008928,InterPro:IPR012341,InterPro:IPR018221,PANTHER:PTHR22298:SF3,PFAM:PF00759,PROSITE:PS00592,PROSITE:PS00698,SUPERFAMILY:SSF48208,SwissProt:O81416,SwissProt:Q8LQ92,SwissProt:Q9SRX3,TAIR:AT1G02800.1,TAIR:AT1G70710.1,TAIR:AT4G02290.1,TrEMBL:B9GSC6,TrEMBL:B9I9P6,TrEMBL:F6HZ65;Derives_from=GSCOCT00005028001;Name=Cc01_g21040;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,CC_EC_number:3.2.1.4,PRODUCT:Endoglucanase 17,CC_functional_completeness:complete,CC_gene:At4g02290,CC_gene:GLU8,CC_gene:CEL2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005028001~ Endoglucanase 17~ At4g02290~ complete;original_location=complement(join(762414..762677%2C762104..762310%2C761756..761956%2C761523..761615%2C761212..761373%2C761019..761130%2C760700..760863%2C760296..760631));owner=coffea | |
| 28864 chr1 manual_curation exon 37432770 37434127 . + . Parent=GSCOCT00005028001 | |
| 28865 chr1 manual_curation exon 37432538 37432701 . + . Parent=GSCOCT00005028001 | |
| 28866 chr1 manual_curation exon 37432271 37432382 . + . Parent=GSCOCT00005028001 | |
| 28867 chr1 manual_curation exon 37432028 37432189 . + . Parent=GSCOCT00005028001 | |
| 28868 chr1 manual_curation exon 37431786 37431878 . + . Parent=GSCOCT00005028001 | |
| 28869 chr1 manual_curation exon 37431445 37431645 . + . Parent=GSCOCT00005028001 | |
| 28870 chr1 manual_curation exon 37431091 37431297 . + . Parent=GSCOCT00005028001 | |
| 28871 chr1 manual_curation exon 37430599 37430987 . + . Parent=GSCOCT00005028001 | |
| 28872 chr1 manual_curation CDS 37432770 37433105 . + 0 Parent=GSCOCT00005028001 | |
| 28873 chr1 manual_curation CDS 37432538 37432701 . + 1 Parent=GSCOCT00005028001 | |
| 28874 chr1 manual_curation CDS 37432271 37432382 . + 0 Parent=GSCOCT00005028001 | |
| 28875 chr1 manual_curation CDS 37432028 37432189 . + 0 Parent=GSCOCT00005028001 | |
| 28876 chr1 manual_curation CDS 37431786 37431878 . + 0 Parent=GSCOCT00005028001 | |
| 28877 chr1 manual_curation CDS 37431445 37431645 . + 0 Parent=GSCOCT00005028001 | |
| 28878 chr1 manual_curation CDS 37431091 37431297 . + 0 Parent=GSCOCT00005028001 | |
| 28879 chr1 manual_curation CDS 37430724 37430987 . + 0 Parent=GSCOCT00005028001 | |
| 28880 chr1 manual_curation gene 37434345 37440398 . - . ID=GSCOCG00005027001;Name=Cc01_g21050 | |
| 28881 chr1 manual_curation mRNA 37434345 37440398 . - . ID=GSCOCT00005027001;Parent=GSCOCG00005027001;Name=Cc01_g21050 | |
| 28882 chr1 manual_curation polypeptide 37434769 37440140 . - . ID=GSCOCP00005027001;Dbxref=InterPro:IPR000368,InterPro:IPR001296,InterPro:IPR012820,PFAM:PF00534,PFAM:PF00862,SwissProt:O24301,SwissProt:Q00917,SwissProt:Q42652,TAIR:AT3G43190.1,TAIR:AT4G02280.1,TAIR:AT5G49190.1,TIGRFAMs:TIGR02470,TrEMBL:A5C6H7,TrEMBL:Q0E7D3;Derives_from=GSCOCT00005027001;Name=Cc01_g21050;Ontology_term=CC_evidence_code:ISS,GO:0005985,GO:0009058,GO:0016157,CC_EC_number:2.4.1.13,PRODUCT:Sucrose synthase 2,CC_functional_completeness:complete,CC_gene:SUS2,CC_gene:SS1,CC_gene:At5g49190;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005027001~ Sucrose synthase 2~ SUS2~ complete;original_location=join(753261..753358%2C753575..753707%2C754339..754490%2C754592..754784%2C754981..755099%2C755220..755436%2C755649..755744%2C755817..755990%2C756556..756672%2C756781..756947%2C757076..757300%2C757519..757840%2C757939..758183%2C758298..758436%2C758594..758632);owner=coffea | |
| 28883 chr1 manual_curation exon 37440043 37440398 . - . Parent=GSCOCT00005027001 | |
| 28884 chr1 manual_curation exon 37439694 37439826 . - . Parent=GSCOCT00005027001 | |
| 28885 chr1 manual_curation exon 37438911 37439062 . - . Parent=GSCOCT00005027001 | |
| 28886 chr1 manual_curation exon 37438617 37438809 . - . Parent=GSCOCT00005027001 | |
| 28887 chr1 manual_curation exon 37438302 37438420 . - . Parent=GSCOCT00005027001 | |
| 28888 chr1 manual_curation exon 37437965 37438181 . - . Parent=GSCOCT00005027001 | |
| 28889 chr1 manual_curation exon 37437657 37437752 . - . Parent=GSCOCT00005027001 | |
| 28890 chr1 manual_curation exon 37437411 37437584 . - . Parent=GSCOCT00005027001 | |
| 28891 chr1 manual_curation exon 37436729 37436845 . - . Parent=GSCOCT00005027001 | |
| 28892 chr1 manual_curation exon 37436454 37436620 . - . Parent=GSCOCT00005027001 | |
| 28893 chr1 manual_curation exon 37436101 37436325 . - . Parent=GSCOCT00005027001 | |
| 28894 chr1 manual_curation exon 37435561 37435882 . - . Parent=GSCOCT00005027001 | |
| 28895 chr1 manual_curation exon 37435218 37435462 . - . Parent=GSCOCT00005027001 | |
| 28896 chr1 manual_curation exon 37434965 37435103 . - . Parent=GSCOCT00005027001 | |
| 28897 chr1 manual_curation exon 37434345 37434807 . - . Parent=GSCOCT00005027001 | |
| 28898 chr1 manual_curation CDS 37440043 37440140 . - 0 Parent=GSCOCT00005027001 | |
| 28899 chr1 manual_curation CDS 37439694 37439826 . - 2 Parent=GSCOCT00005027001 | |
| 28900 chr1 manual_curation CDS 37438911 37439062 . - 0 Parent=GSCOCT00005027001 | |
| 28901 chr1 manual_curation CDS 37438617 37438809 . - 2 Parent=GSCOCT00005027001 | |
| 28902 chr1 manual_curation CDS 37438302 37438420 . - 0 Parent=GSCOCT00005027001 | |
| 28903 chr1 manual_curation CDS 37437965 37438181 . - 2 Parent=GSCOCT00005027001 | |
| 28904 chr1 manual_curation CDS 37437657 37437752 . - 0 Parent=GSCOCT00005027001 | |
| 28905 chr1 manual_curation CDS 37437411 37437584 . - 0 Parent=GSCOCT00005027001 | |
| 28906 chr1 manual_curation CDS 37436729 37436845 . - 0 Parent=GSCOCT00005027001 | |
| 28907 chr1 manual_curation CDS 37436454 37436620 . - 0 Parent=GSCOCT00005027001 | |
| 28908 chr1 manual_curation CDS 37436101 37436325 . - 2 Parent=GSCOCT00005027001 | |
| 28909 chr1 manual_curation CDS 37435561 37435882 . - 2 Parent=GSCOCT00005027001 | |
| 28910 chr1 manual_curation CDS 37435218 37435462 . - 0 Parent=GSCOCT00005027001 | |
| 28911 chr1 manual_curation CDS 37434965 37435103 . - 2 Parent=GSCOCT00005027001 | |
| 28912 chr1 manual_curation CDS 37434769 37434807 . - 0 Parent=GSCOCT00005027001 | |
| 28913 chr1 manual_curation gene 37441852 37443619 . + . ID=GSCOCG00005026001;Name=Cc01_g21060 | |
| 28914 chr1 manual_curation mRNA 37441852 37443619 . + . ID=GSCOCT00005026001;Parent=GSCOCG00005026001;Name=Cc01_g21060 | |
| 28915 chr1 manual_curation polypeptide 37441852 37443619 . + . ID=GSCOCP00005026001;Dbxref=GENE3D:G3DSA:2.160.20.10,InterPro:IPR000743,InterPro:IPR006626,InterPro:IPR011050,InterPro:IPR012334,PFAM:PF00295,PROSITE:PS00502,SMART:SM00710,SUPERFAMILY:SSF51126,SwissProt:P49062,SwissProt:Q39766,SwissProt:Q39786,TAIR:AT1G02790.1,TAIR:AT3G07820.1,TAIR:AT4G18180.1,TrEMBL:A5AMR9,TrEMBL:F6HZ66,TrEMBL:Q9FV64;Derives_from=GSCOCT00005026001;Name=Cc01_g21060;Ontology_term=CC_evidence_code:ISS,GO:0004650,GO:0005975,CC_EC_number:3.2.1.67,PRODUCT:Putative Exopolygalacturonase clone GBGE184,CC_functional_completeness:complete,CC_gene:PGA3,CC_gene:G9;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005026001~ Putative Exopolygalacturonase clone GBGE184~ PGA3~ complete;original_location=complement(join(751370..751549%2C750919..751224%2C750501..750790%2C750186..750405%2C749782..750015));owner=coffea | |
| 28916 chr1 manual_curation exon 37443386 37443619 . + . Parent=GSCOCT00005026001 | |
| 28917 chr1 manual_curation exon 37442996 37443215 . + . Parent=GSCOCT00005026001 | |
| 28918 chr1 manual_curation exon 37442611 37442900 . + . Parent=GSCOCT00005026001 | |
| 28919 chr1 manual_curation exon 37442177 37442482 . + . Parent=GSCOCT00005026001 | |
| 28920 chr1 manual_curation exon 37441852 37442031 . + . Parent=GSCOCT00005026001 | |
| 28921 chr1 manual_curation CDS 37443386 37443619 . + 0 Parent=GSCOCT00005026001 | |
| 28922 chr1 manual_curation CDS 37442996 37443215 . + 2 Parent=GSCOCT00005026001 | |
| 28923 chr1 manual_curation CDS 37442611 37442900 . + 0 Parent=GSCOCT00005026001 | |
| 28924 chr1 manual_curation CDS 37442177 37442482 . + 0 Parent=GSCOCT00005026001 | |
| 28925 chr1 manual_curation CDS 37441852 37442031 . + 0 Parent=GSCOCT00005026001 | |
| 28926 chr1 manual_curation gene 37451765 37461933 . + . ID=GSCOCG00005025001;Name=Cc01_g21070 | |
| 28927 chr1 manual_curation mRNA 37451765 37461933 . + . ID=GSCOCT00005025001;Parent=GSCOCG00005025001;Name=Cc01_g21070 | |
| 28928 chr1 manual_curation polypeptide 37452179 37461511 . + . ID=GSCOCP00005025001;Dbxref=GENE3D:G3DSA:3.10.20.30,InterPro:IPR003607,InterPro:IPR004095,InterPro:IPR006674,InterPro:IPR007685,InterPro:IPR012675,InterPro:IPR012676,PFAM:PF01966,PFAM:PF02824,PFAM:PF04607,SMART:SM00471,SUPERFAMILY:SSF81271,SwissProt:O52177,SwissProt:O54408,SwissProt:Q54089,TAIR:AT1G54130.1,TAIR:AT3G14050.1,TAIR:AT4G02260.1,TrEMBL:B9I9P5,TrEMBL:E2JCC7,TrEMBL:Q84LE7;Derives_from=GSCOCT00005025001;Name=Cc01_g21070;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0015969,CC_EC_number:2.7.6.5,PRODUCT:Putative GTP pyrophosphokinase,CC_functional_completeness:complete,CC_gene:relA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005025001~ Putative GTP pyrophosphokinase~ relA~ complete;original_location=complement(join(741198..741222%2C740861..741057%2C739913..740092%2C739265..739330%2C738901..738993%2C738650..738781%2C738456..738557%2C738291..738368%2C738104..738175%2C737232..737339%2C736932..737029%2C735700..735760%2C735544..735606%2C735367..735423%2C735176..735277%2C734842..735000%2C734548..734679%2C734383..734469%2C734241..734312%2C733151..733237%2C732620..733067%2C732233..732294%2C732072..732140%2C731890..731994));owner=coffea | |
| 28929 chr1 manual_curation exon 37461407 37461933 . + . Parent=GSCOCT00005025001 | |
| 28930 chr1 manual_curation exon 37461261 37461329 . + . Parent=GSCOCT00005025001 | |
| 28931 chr1 manual_curation exon 37461107 37461168 . + . Parent=GSCOCT00005025001 | |
| 28932 chr1 manual_curation exon 37460334 37460781 . + . Parent=GSCOCT00005025001 | |
| 28933 chr1 manual_curation exon 37460164 37460250 . + . Parent=GSCOCT00005025001 | |
| 28934 chr1 manual_curation exon 37459089 37459160 . + . Parent=GSCOCT00005025001 | |
| 28935 chr1 manual_curation exon 37458932 37459018 . + . Parent=GSCOCT00005025001 | |
| 28936 chr1 manual_curation exon 37458722 37458853 . + . Parent=GSCOCT00005025001 | |
| 28937 chr1 manual_curation exon 37458401 37458559 . + . Parent=GSCOCT00005025001 | |
| 28938 chr1 manual_curation exon 37458124 37458225 . + . Parent=GSCOCT00005025001 | |
| 28939 chr1 manual_curation exon 37457978 37458034 . + . Parent=GSCOCT00005025001 | |
| 28940 chr1 manual_curation exon 37457795 37457857 . + . Parent=GSCOCT00005025001 | |
| 28941 chr1 manual_curation exon 37457641 37457701 . + . Parent=GSCOCT00005025001 | |
| 28942 chr1 manual_curation exon 37456372 37456469 . + . Parent=GSCOCT00005025001 | |
| 28943 chr1 manual_curation exon 37456062 37456169 . + . Parent=GSCOCT00005025001 | |
| 28944 chr1 manual_curation exon 37455226 37455297 . + . Parent=GSCOCT00005025001 | |
| 28945 chr1 manual_curation exon 37455033 37455110 . + . Parent=GSCOCT00005025001 | |
| 28946 chr1 manual_curation exon 37454844 37454945 . + . Parent=GSCOCT00005025001 | |
| 28947 chr1 manual_curation exon 37454620 37454751 . + . Parent=GSCOCT00005025001 | |
| 28948 chr1 manual_curation exon 37454408 37454500 . + . Parent=GSCOCT00005025001 | |
| 28949 chr1 manual_curation exon 37454071 37454136 . + . Parent=GSCOCT00005025001 | |
| 28950 chr1 manual_curation exon 37453309 37453488 . + . Parent=GSCOCT00005025001 | |
| 28951 chr1 manual_curation exon 37452344 37452540 . + . Parent=GSCOCT00005025001 | |
| 28952 chr1 manual_curation exon 37451765 37452203 . + . Parent=GSCOCT00005025001 | |
| 28953 chr1 manual_curation CDS 37461407 37461511 . + 0 Parent=GSCOCT00005025001 | |
| 28954 chr1 manual_curation CDS 37461261 37461329 . + 0 Parent=GSCOCT00005025001 | |
| 28955 chr1 manual_curation CDS 37461107 37461168 . + 1 Parent=GSCOCT00005025001 | |
| 28956 chr1 manual_curation CDS 37460334 37460781 . + 0 Parent=GSCOCT00005025001 | |
| 28957 chr1 manual_curation CDS 37460164 37460250 . + 0 Parent=GSCOCT00005025001 | |
| 28958 chr1 manual_curation CDS 37459089 37459160 . + 0 Parent=GSCOCT00005025001 | |
| 28959 chr1 manual_curation CDS 37458932 37459018 . + 0 Parent=GSCOCT00005025001 | |
| 28960 chr1 manual_curation CDS 37458722 37458853 . + 0 Parent=GSCOCT00005025001 | |
| 28961 chr1 manual_curation CDS 37458401 37458559 . + 0 Parent=GSCOCT00005025001 | |
| 28962 chr1 manual_curation CDS 37458124 37458225 . + 0 Parent=GSCOCT00005025001 | |
| 28963 chr1 manual_curation CDS 37457978 37458034 . + 0 Parent=GSCOCT00005025001 | |
| 28964 chr1 manual_curation CDS 37457795 37457857 . + 0 Parent=GSCOCT00005025001 | |
| 28965 chr1 manual_curation CDS 37457641 37457701 . + 2 Parent=GSCOCT00005025001 | |
| 28966 chr1 manual_curation CDS 37456372 37456469 . + 0 Parent=GSCOCT00005025001 | |
| 28967 chr1 manual_curation CDS 37456062 37456169 . + 0 Parent=GSCOCT00005025001 | |
| 28968 chr1 manual_curation CDS 37455226 37455297 . + 0 Parent=GSCOCT00005025001 | |
| 28969 chr1 manual_curation CDS 37455033 37455110 . + 0 Parent=GSCOCT00005025001 | |
| 28970 chr1 manual_curation CDS 37454844 37454945 . + 0 Parent=GSCOCT00005025001 | |
| 28971 chr1 manual_curation CDS 37454620 37454751 . + 0 Parent=GSCOCT00005025001 | |
| 28972 chr1 manual_curation CDS 37454408 37454500 . + 0 Parent=GSCOCT00005025001 | |
| 28973 chr1 manual_curation CDS 37454071 37454136 . + 0 Parent=GSCOCT00005025001 | |
| 28974 chr1 manual_curation CDS 37453309 37453488 . + 0 Parent=GSCOCT00005025001 | |
| 28975 chr1 manual_curation CDS 37452344 37452540 . + 1 Parent=GSCOCT00005025001 | |
| 28976 chr1 manual_curation CDS 37452179 37452203 . + 0 Parent=GSCOCT00005025001 | |
| 28977 chr1 manual_curation gene 37463259 37466313 . - . ID=GSCOCG00005024001;Name=Cc01_g21080 | |
| 28978 chr1 manual_curation mRNA 37463259 37466313 . - . ID=GSCOCT00005024001;Parent=GSCOCG00005024001;Name=Cc01_g21080 | |
| 28979 chr1 manual_curation polypeptide 37463599 37466016 . - . ID=GSCOCP00005024001;Derives_from=GSCOCT00005024001;Name=Cc01_g21080;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005024001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(727385..727716%2C727823..727892%2C728058..729701%2C729779..729802);owner=coffea | |
| 28980 chr1 manual_curation exon 37465685 37466313 . - . Parent=GSCOCT00005024001 | |
| 28981 chr1 manual_curation exon 37465509 37465578 . - . Parent=GSCOCT00005024001 | |
| 28982 chr1 manual_curation exon 37463700 37465343 . - . Parent=GSCOCT00005024001 | |
| 28983 chr1 manual_curation exon 37463259 37463622 . - . Parent=GSCOCT00005024001 | |
| 28984 chr1 manual_curation CDS 37465685 37466016 . - 0 Parent=GSCOCT00005024001 | |
| 28985 chr1 manual_curation CDS 37465509 37465578 . - 2 Parent=GSCOCT00005024001 | |
| 28986 chr1 manual_curation CDS 37463700 37465343 . - 0 Parent=GSCOCT00005024001 | |
| 28987 chr1 manual_curation CDS 37463599 37463622 . - 0 Parent=GSCOCT00005024001 | |
| 28988 chr1 manual_curation gene 37471958 37473547 . + . ID=GSCOCG00005023001;Name=Cc01_g21090 | |
| 28989 chr1 manual_curation mRNA 37471958 37473547 . + . ID=GSCOCT00005023001;Parent=GSCOCG00005023001;Name=Cc01_g21090 | |
| 28990 chr1 manual_curation polypeptide 37472153 37473265 . + . ID=GSCOCP00005023001;Dbxref=GENE3D:G3DSA:3.30.730.10,InterPro:IPR001471,InterPro:IPR016177,PFAM:PF00847,PRINTS:PR00367,PROFILE:PS51032,SMART:SM00380,SUPERFAMILY:SSF54171,SwissProt:O22259,SwissProt:P42736,SwissProt:Q6K7E6,TAIR:AT1G72360.2,TAIR:AT2G47520.1,TAIR:AT3G16770.1,TrEMBL:Q6QX54,TrEMBL:Q6RJ36,TrEMBL:Q84XB2;Derives_from=GSCOCT00005023001;Name=Cc01_g21090;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,CC_EC_number:missing_EC_number,PRODUCT:ERF-like transcription factor,CC_functional_completeness:complete,CC_gene:RAP2-3,CC_gene:EREBP1,CC_gene:ERF071;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005023001~ ERF-like transcription factor~ RAP2-3~ complete;original_location=complement(join(721044..721248%2C720136..720917));owner=coffea | |
| 28991 chr1 manual_curation exon 37472484 37473547 . + . Parent=GSCOCT00005023001 | |
| 28992 chr1 manual_curation exon 37471958 37472357 . + . Parent=GSCOCT00005023001 | |
| 28993 chr1 manual_curation CDS 37472484 37473265 . + 1 Parent=GSCOCT00005023001 | |
| 28994 chr1 manual_curation CDS 37472153 37472357 . + 0 Parent=GSCOCT00005023001 | |
| 28995 chr1 manual_curation gene 37477944 37480370 . + . ID=GSCOCG00005022001;Name=Cc01_g21100 | |
| 28996 chr1 manual_curation mRNA 37477944 37480370 . + . ID=GSCOCT00005022001;Parent=GSCOCG00005022001;Name=Cc01_g21100 | |
| 28997 chr1 manual_curation polypeptide 37478014 37479949 . + . ID=GSCOCP00005022001;Dbxref=GENE3D:G3DSA:1.10.1200.60,GENE3D:G3DSA:1.10.1650.10,InterPro:IPR000196,InterPro:IPR015972,InterPro:IPR015974,PFAM:PF01280,PROSITE:PS00526,SUPERFAMILY:SSF48140,SwissProt:P49693,SwissProt:Q9LUQ6,TAIR:AT3G16780.1,TAIR:AT4G02230.1,TrEMBL:C6T3U6,TrEMBL:D7L670;Derives_from=GSCOCT00005022001;Name=Cc01_g21100;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:60S ribosomal protein L19-2,CC_functional_completeness:complete,CC_gene:RPL19B,CC_gene:RPL19A,CC_gene:RPL19C;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005022001~ 60S ribosomal protein L19-2~ RPL19B~ complete;original_location=complement(join(715276..715387%2C713892..714328%2C713567..713625%2C713452..713476));owner=coffea | |
| 28998 chr1 manual_curation exon 37479925 37480370 . + . Parent=GSCOCT00005022001 | |
| 28999 chr1 manual_curation exon 37479776 37479834 . + . Parent=GSCOCT00005022001 | |
| 29000 chr1 manual_curation exon 37479073 37479509 . + . Parent=GSCOCT00005022001 | |
| 29001 chr1 manual_curation exon 37477944 37478125 . + . Parent=GSCOCT00005022001 | |
| 29002 chr1 manual_curation CDS 37479925 37479949 . + 2 Parent=GSCOCT00005022001 | |
| 29003 chr1 manual_curation CDS 37479776 37479834 . + 0 Parent=GSCOCT00005022001 | |
| 29004 chr1 manual_curation CDS 37479073 37479509 . + 1 Parent=GSCOCT00005022001 | |
| 29005 chr1 manual_curation CDS 37478014 37478125 . + 0 Parent=GSCOCT00005022001 | |
| 29006 chr1 manual_curation gene 37480845 37484863 . - . ID=GSCOCG00005021001;Name=Cc01_g21110 | |
| 29007 chr1 manual_curation mRNA 37480845 37484863 . - . ID=GSCOCT00005021001;Parent=GSCOCG00005021001;Name=Cc01_g21110 | |
| 29008 chr1 manual_curation polypeptide 37481092 37483806 . - . ID=GSCOCP00005021001;Dbxref=GENE3D:G3DSA:3.30.565.10,InterPro:IPR003018,InterPro:IPR003594,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR009082,PFAM:PF00512,PFAM:PF01590,PFAM:PF02518,PRINTS:PR00344,PROFILE:PS50109,SMART:SM00065,SMART:SM00387,SMART:SM00388,SUPERFAMILY:SSF47384,SUPERFAMILY:SSF55874,SwissProt:O81122,SwissProt:O82436,SwissProt:Q9ZWL6,TAIR:AT1G66340.1,TAIR:AT2G40940.1,TAIR:AT3G04580.1,TrEMBL:B3FIA8,TrEMBL:B9GSD5,TrEMBL:Q75PY6;Derives_from=GSCOCT00005021001;Name=Cc01_g21110;Ontology_term=CC_evidence_code:ISS,GO:0000155,GO:0004673,GO:0004871,GO:0005524,GO:0007165,GO:0016020,GO:0016310,GO:0018106,CC_EC_number:2.7.13.3,PRODUCT:Ethylene receptor,CC_functional_completeness:complete,CC_gene:ETR1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005021001~ Ethylene receptor~ ETR1~ complete;original_location=join(709595..709657%2C709715..710623%2C710823..711191%2C711295..711558%2C711984..712111%2C712204..712309);owner=coffea | |
| 29009 chr1 manual_curation exon 37483744 37484863 . - . Parent=GSCOCT00005021001 | |
| 29010 chr1 manual_curation exon 37482778 37483686 . - . Parent=GSCOCT00005021001 | |
| 29011 chr1 manual_curation exon 37482210 37482578 . - . Parent=GSCOCT00005021001 | |
| 29012 chr1 manual_curation exon 37481843 37482106 . - . Parent=GSCOCT00005021001 | |
| 29013 chr1 manual_curation exon 37481290 37481417 . - . Parent=GSCOCT00005021001 | |
| 29014 chr1 manual_curation exon 37480845 37481197 . - . Parent=GSCOCT00005021001 | |
| 29015 chr1 manual_curation CDS 37483744 37483806 . - 0 Parent=GSCOCT00005021001 | |
| 29016 chr1 manual_curation CDS 37482778 37483686 . - 0 Parent=GSCOCT00005021001 | |
| 29017 chr1 manual_curation CDS 37482210 37482578 . - 0 Parent=GSCOCT00005021001 | |
| 29018 chr1 manual_curation CDS 37481843 37482106 . - 0 Parent=GSCOCT00005021001 | |
| 29019 chr1 manual_curation CDS 37481290 37481417 . - 0 Parent=GSCOCT00005021001 | |
| 29020 chr1 manual_curation CDS 37481092 37481197 . - 2 Parent=GSCOCT00005021001 | |
| 29021 chr1 manual_curation gene 37485189 37492462 . - . ID=GSCOCG00005020001;Name=Cc01_g21120 | |
| 29022 chr1 manual_curation mRNA 37485189 37492462 . - . ID=GSCOCT00005020001;Parent=GSCOCG00005020001;Name=Cc01_g21120 | |
| 29023 chr1 manual_curation polypeptide 37485627 37491989 . - . ID=GSCOCP00005020001;Dbxref=InterPro:IPR000362,InterPro:IPR005677,InterPro:IPR008948,InterPro:IPR018951,InterPro:IPR020557,InterPro:IPR022761,PFAM:PF00206,PFAM:PF10415,PRINTS:PR00149,PROSITE:PS00163,SUPERFAMILY:SSF48557,SwissProt:P93033,SwissProt:Q60HF9,SwissProt:Q9FI53,TAIR:AT2G47510.1,TAIR:AT5G50950.1,TIGRFAMs:TIGR00979,TrEMBL:B9GSD7,TrEMBL:D7U2D2,TrEMBL:I1L7S9;Derives_from=GSCOCT00005020001;Name=Cc01_g21120;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004333,GO:0006099,GO:0006106,GO:0016829,GO:0045239,CC_EC_number:4.2.1.2,CC_EC_number:4.2.1.2,PRODUCT:Fumarate hydratase 1%2C mitochondrial,CC_functional_completeness:complete,CC_gene:FUM1,CC_gene:FUM2,CC_gene:FH;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005020001~ Fumarate hydratase 1%2C mitochondrial~ FUM1~ complete;original_location=join(701412..701545%2C702522..702639%2C702926..703075%2C703249..703359%2C703489..703572%2C703998..704096%2C704520..704570%2C704658..704707%2C704824..704905%2C705682..705776%2C705861..705927%2C706055..706105%2C706381..706476%2C706946..707044%2C707135..707164%2C707268..707333%2C707688..707774);owner=coffea | |
| 29024 chr1 manual_curation exon 37492147 37492462 . - . Parent=GSCOCT00005020001 | |
| 29025 chr1 manual_curation exon 37491856 37492016 . - . Parent=GSCOCT00005020001 | |
| 29026 chr1 manual_curation exon 37490762 37490879 . - . Parent=GSCOCT00005020001 | |
| 29027 chr1 manual_curation exon 37490326 37490475 . - . Parent=GSCOCT00005020001 | |
| 29028 chr1 manual_curation exon 37490042 37490152 . - . Parent=GSCOCT00005020001 | |
| 29029 chr1 manual_curation exon 37489829 37489912 . - . Parent=GSCOCT00005020001 | |
| 29030 chr1 manual_curation exon 37489305 37489403 . - . Parent=GSCOCT00005020001 | |
| 29031 chr1 manual_curation exon 37488831 37488881 . - . Parent=GSCOCT00005020001 | |
| 29032 chr1 manual_curation exon 37488694 37488743 . - . Parent=GSCOCT00005020001 | |
| 29033 chr1 manual_curation exon 37488496 37488577 . - . Parent=GSCOCT00005020001 | |
| 29034 chr1 manual_curation exon 37487625 37487719 . - . Parent=GSCOCT00005020001 | |
| 29035 chr1 manual_curation exon 37487474 37487540 . - . Parent=GSCOCT00005020001 | |
| 29036 chr1 manual_curation exon 37487296 37487346 . - . Parent=GSCOCT00005020001 | |
| 29037 chr1 manual_curation exon 37486925 37487020 . - . Parent=GSCOCT00005020001 | |
| 29038 chr1 manual_curation exon 37486357 37486455 . - . Parent=GSCOCT00005020001 | |
| 29039 chr1 manual_curation exon 37486237 37486266 . - . Parent=GSCOCT00005020001 | |
| 29040 chr1 manual_curation exon 37486068 37486133 . - . Parent=GSCOCT00005020001 | |
| 29041 chr1 manual_curation exon 37485189 37485713 . - . Parent=GSCOCT00005020001 | |
| 29042 chr1 manual_curation CDS 37491856 37491989 . - 0 Parent=GSCOCT00005020001 | |
| 29043 chr1 manual_curation CDS 37490762 37490879 . - 2 Parent=GSCOCT00005020001 | |
| 29044 chr1 manual_curation CDS 37490326 37490475 . - 0 Parent=GSCOCT00005020001 | |
| 29045 chr1 manual_curation CDS 37490042 37490152 . - 0 Parent=GSCOCT00005020001 | |
| 29046 chr1 manual_curation CDS 37489829 37489912 . - 0 Parent=GSCOCT00005020001 | |
| 29047 chr1 manual_curation CDS 37489305 37489403 . - 0 Parent=GSCOCT00005020001 | |
| 29048 chr1 manual_curation CDS 37488831 37488881 . - 0 Parent=GSCOCT00005020001 | |
| 29049 chr1 manual_curation CDS 37488694 37488743 . - 0 Parent=GSCOCT00005020001 | |
| 29050 chr1 manual_curation CDS 37488496 37488577 . - 2 Parent=GSCOCT00005020001 | |
| 29051 chr1 manual_curation CDS 37487625 37487719 . - 0 Parent=GSCOCT00005020001 | |
| 29052 chr1 manual_curation CDS 37487474 37487540 . - 2 Parent=GSCOCT00005020001 | |
| 29053 chr1 manual_curation CDS 37487296 37487346 . - 0 Parent=GSCOCT00005020001 | |
| 29054 chr1 manual_curation CDS 37486925 37487020 . - 0 Parent=GSCOCT00005020001 | |
| 29055 chr1 manual_curation CDS 37486357 37486455 . - 0 Parent=GSCOCT00005020001 | |
| 29056 chr1 manual_curation CDS 37486237 37486266 . - 0 Parent=GSCOCT00005020001 | |
| 29057 chr1 manual_curation CDS 37486068 37486133 . - 0 Parent=GSCOCT00005020001 | |
| 29058 chr1 manual_curation CDS 37485627 37485713 . - 0 Parent=GSCOCT00005020001 | |
| 29059 chr1 manual_curation gene 37494478 37494693 . + . ID=GSCOCG00005019001;Name=Cc01_g21130 | |
| 29060 chr1 manual_curation mRNA 37494478 37494693 . + . ID=GSCOCT00005019001;Parent=GSCOCG00005019001;Name=Cc01_g21130 | |
| 29061 chr1 manual_curation polypeptide 37494478 37494693 . + . ID=GSCOCP00005019001;Dbxref=InterPro:IPR000719,InterPro:IPR011009,InterPro:IPR017442,PFAM:PF00069,PROFILE:PS50011,SUPERFAMILY:SSF56112,SwissProt:A2YBX5,SwissProt:P15792,SwissProt:Q0DCT8,TAIR:AT4G26610.1,TAIR:AT5G47750.1,TAIR:AT5G55910.1,TrEMBL:F6H8A3,TrEMBL:F6I571,TrEMBL:I1IIW2;Derives_from=GSCOCT00005019001;Name=Cc01_g21130;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0005524,GO:0006468,CC_EC_number:2.7.11.11,PRODUCT:Protein kinase G11A,CC_functional_completeness:fragment,CC_gene:Os06g0291600,CC_gene:OsI_021818;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005019001~ Protein kinase G11A~ Os06g0291600~ fragment;original_location=complement(698708..698923);owner=coffea | |
| 29062 chr1 manual_curation exon 37494478 37494693 . + . Parent=GSCOCT00005019001 | |
| 29063 chr1 manual_curation CDS 37494478 37494693 . + 0 Parent=GSCOCT00005019001 | |
| 29064 chr1 manual_curation gene 37505250 37509340 . + . ID=GSCOCG00005018001;Name=Cc01_g21140 | |
| 29065 chr1 manual_curation mRNA 37505250 37509340 . + . ID=GSCOCT00005018001;Parent=GSCOCG00005018001;Name=Cc01_g21140 | |
| 29066 chr1 manual_curation polypeptide 37505405 37508846 . + . ID=GSCOCP00005018001;Dbxref=GENE3D:G3DSA:2.160.20.10,InterPro:IPR000743,InterPro:IPR006626,InterPro:IPR011050,InterPro:IPR012334,PFAM:PF00295,SMART:SM00710,SUPERFAMILY:SSF51126,SwissProt:A7PZL3,SwissProt:O22818,SwissProt:Q9LW07,TAIR:AT3G06770.2,TAIR:AT3G16850.1,TAIR:AT5G49215.1,TrEMBL:D7U2D3,TrEMBL:F6H6V7,TrEMBL:Q2XTD7;Derives_from=GSCOCT00005018001;Name=Cc01_g21140;Ontology_term=CC_evidence_code:ISS,GO:0004650,GO:0005975,CC_EC_number:3.2.1.67,PRODUCT:Putative Probable polygalacturonase,CC_functional_completeness:complete,CC_gene:GSVIVT00026920001,CC_gene:At3g15720,CC_gene:At2g43860;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005018001~ Putative Probable polygalacturonase~ GSVIVT00026920001~ complete;original_location=complement(join(687964..687996%2C686376..686693%2C685765..685885%2C685489..685663%2C685334..685404%2C684555..685225));owner=coffea | |
| 29067 chr1 manual_curation exon 37508176 37509340 . + . Parent=GSCOCT00005018001 | |
| 29068 chr1 manual_curation exon 37507997 37508067 . + . Parent=GSCOCT00005018001 | |
| 29069 chr1 manual_curation exon 37507738 37507912 . + . Parent=GSCOCT00005018001 | |
| 29070 chr1 manual_curation exon 37507516 37507636 . + . Parent=GSCOCT00005018001 | |
| 29071 chr1 manual_curation exon 37506708 37507025 . + . Parent=GSCOCT00005018001 | |
| 29072 chr1 manual_curation exon 37505250 37505437 . + . Parent=GSCOCT00005018001 | |
| 29073 chr1 manual_curation CDS 37508176 37508846 . + 1 Parent=GSCOCT00005018001 | |
| 29074 chr1 manual_curation CDS 37507997 37508067 . + 2 Parent=GSCOCT00005018001 | |
| 29075 chr1 manual_curation CDS 37507738 37507912 . + 1 Parent=GSCOCT00005018001 | |
| 29076 chr1 manual_curation CDS 37507516 37507636 . + 0 Parent=GSCOCT00005018001 | |
| 29077 chr1 manual_curation CDS 37506708 37507025 . + 0 Parent=GSCOCT00005018001 | |
| 29078 chr1 manual_curation CDS 37505405 37505437 . + 0 Parent=GSCOCT00005018001 | |
| 29079 chr1 manual_curation gene 37509719 37513812 . - . ID=GSCOCG00005017001;Name=Cc01_g21150 | |
| 29080 chr1 manual_curation mRNA 37509719 37513812 . - . ID=GSCOCT00005017001;Parent=GSCOCG00005017001;Name=Cc01_g21150 | |
| 29081 chr1 manual_curation polypeptide 37510248 37513311 . - . ID=GSCOCP00005017001;Dbxref=InterPro:IPR002893,InterPro:IPR007320,PFAM:PF01753,PFAM:PF04194,PROFILE:PS50865,PROSITE:PS01360,SwissProt:P47816,SwissProt:Q16342,SwissProt:Q2YDC9,TAIR:AT4G02220.1,TrEMBL:B9GSD8,TrEMBL:B9T078,TrEMBL:D7M433;Derives_from=GSCOCT00005017001;Name=Cc01_g21150;Ontology_term=CC_evidence_code:ISS,GO:0005737,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative Programmed cell death protein 2,CC_functional_completeness:complete,CC_gene:PDCD2,CC_gene:Pdcd2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005017001~ Putative Programmed cell death protein 2~ PDCD2~ complete;original_location=join(680090..680239%2C680389..680472%2C680581..680714%2C680866..680963%2C681485..681573%2C681672..681777%2C682153..682298%2C682381..682451%2C682688..682802%2C682986..683153);owner=coffea | |
| 29082 chr1 manual_curation exon 37513162 37513812 . - . Parent=GSCOCT00005017001 | |
| 29083 chr1 manual_curation exon 37512929 37513012 . - . Parent=GSCOCT00005017001 | |
| 29084 chr1 manual_curation exon 37512687 37512820 . - . Parent=GSCOCT00005017001 | |
| 29085 chr1 manual_curation exon 37512438 37512535 . - . Parent=GSCOCT00005017001 | |
| 29086 chr1 manual_curation exon 37511828 37511916 . - . Parent=GSCOCT00005017001 | |
| 29087 chr1 manual_curation exon 37511624 37511729 . - . Parent=GSCOCT00005017001 | |
| 29088 chr1 manual_curation exon 37511103 37511248 . - . Parent=GSCOCT00005017001 | |
| 29089 chr1 manual_curation exon 37510950 37511020 . - . Parent=GSCOCT00005017001 | |
| 29090 chr1 manual_curation exon 37510599 37510713 . - . Parent=GSCOCT00005017001 | |
| 29091 chr1 manual_curation exon 37509719 37510415 . - . Parent=GSCOCT00005017001 | |
| 29092 chr1 manual_curation CDS 37513162 37513311 . - 0 Parent=GSCOCT00005017001 | |
| 29093 chr1 manual_curation CDS 37512929 37513012 . - 0 Parent=GSCOCT00005017001 | |
| 29094 chr1 manual_curation CDS 37512687 37512820 . - 0 Parent=GSCOCT00005017001 | |
| 29095 chr1 manual_curation CDS 37512438 37512535 . - 2 Parent=GSCOCT00005017001 | |
| 29096 chr1 manual_curation CDS 37511828 37511916 . - 1 Parent=GSCOCT00005017001 | |
| 29097 chr1 manual_curation CDS 37511624 37511729 . - 0 Parent=GSCOCT00005017001 | |
| 29098 chr1 manual_curation CDS 37511103 37511248 . - 1 Parent=GSCOCT00005017001 | |
| 29099 chr1 manual_curation CDS 37510950 37511020 . - 0 Parent=GSCOCT00005017001 | |
| 29100 chr1 manual_curation CDS 37510599 37510713 . - 2 Parent=GSCOCT00005017001 | |
| 29101 chr1 manual_curation CDS 37510248 37510415 . - 0 Parent=GSCOCT00005017001 | |
| 29102 chr1 manual_curation gene 37516806 37523306 . - . ID=GSCOCG00005016001;Name=Cc01_g21160 | |
| 29103 chr1 manual_curation mRNA 37516806 37523306 . - . ID=GSCOCT00005016001;Parent=GSCOCG00005016001;Name=Cc01_g21160 | |
| 29104 chr1 manual_curation polypeptide 37517085 37522767 . - . ID=GSCOCP00005016001;Dbxref=GENE3D:G3DSA:1.10.418.10,GENE3D:G3DSA:3.40.850.10,InterPro:IPR001715,InterPro:IPR001752,InterPro:IPR016146,PFAM:PF00225,PFAM:PF00307,PRINTS:PR00380,PROFILE:PS50021,PROFILE:PS50067,SMART:SM00033,SMART:SM00129,SUPERFAMILY:SSF47576,SwissProt:O81635,SwissProt:P46875,SwissProt:P79955,TAIR:AT1G09170.1,TAIR:AT2G47500.1,TAIR:AT5G27000.1,TrEMBL:B9GSE0,TrEMBL:B9SAW6,TrEMBL:F6HZ74;Derives_from=GSCOCT00005016001;Name=Cc01_g21160;Ontology_term=CC_evidence_code:ISS,GO:0003777,GO:0005524,GO:0007018,CC_EC_number:missing_EC_number,PRODUCT:Kinesin-4,CC_functional_completeness:complete,CC_gene:ATK4,CC_gene:ATK3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005016001~ Kinesin-4~ ATK4~ complete;original_location=join(670634..670775%2C671141..671307%2C671414..671557%2C671667..671903%2C671999..672067%2C672208..672276%2C672541..672615%2C672732..672860%2C672964..673045%2C673219..673314%2C673430..673603%2C673703..673809%2C673896..674102%2C674274..674410%2C674488..674741%2C674832..674995%2C675069..675230%2C675616..676097%2C676187..676316);owner=coffea | |
| 29105 chr1 manual_curation exon 37522626 37523306 . - . Parent=GSCOCT00005016001 | |
| 29106 chr1 manual_curation exon 37522094 37522260 . - . Parent=GSCOCT00005016001 | |
| 29107 chr1 manual_curation exon 37521844 37521987 . - . Parent=GSCOCT00005016001 | |
| 29108 chr1 manual_curation exon 37521498 37521734 . - . Parent=GSCOCT00005016001 | |
| 29109 chr1 manual_curation exon 37521334 37521402 . - . Parent=GSCOCT00005016001 | |
| 29110 chr1 manual_curation exon 37521125 37521193 . - . Parent=GSCOCT00005016001 | |
| 29111 chr1 manual_curation exon 37520786 37520860 . - . Parent=GSCOCT00005016001 | |
| 29112 chr1 manual_curation exon 37520541 37520669 . - . Parent=GSCOCT00005016001 | |
| 29113 chr1 manual_curation exon 37520356 37520437 . - . Parent=GSCOCT00005016001 | |
| 29114 chr1 manual_curation exon 37520087 37520182 . - . Parent=GSCOCT00005016001 | |
| 29115 chr1 manual_curation exon 37519798 37519971 . - . Parent=GSCOCT00005016001 | |
| 29116 chr1 manual_curation exon 37519592 37519698 . - . Parent=GSCOCT00005016001 | |
| 29117 chr1 manual_curation exon 37519299 37519505 . - . Parent=GSCOCT00005016001 | |
| 29118 chr1 manual_curation exon 37518991 37519127 . - . Parent=GSCOCT00005016001 | |
| 29119 chr1 manual_curation exon 37518660 37518913 . - . Parent=GSCOCT00005016001 | |
| 29120 chr1 manual_curation exon 37518406 37518569 . - . Parent=GSCOCT00005016001 | |
| 29121 chr1 manual_curation exon 37518171 37518332 . - . Parent=GSCOCT00005016001 | |
| 29122 chr1 manual_curation exon 37517304 37517785 . - . Parent=GSCOCT00005016001 | |
| 29123 chr1 manual_curation exon 37516806 37517214 . - . Parent=GSCOCT00005016001 | |
| 29124 chr1 manual_curation CDS 37522626 37522767 . - 0 Parent=GSCOCT00005016001 | |
| 29125 chr1 manual_curation CDS 37522094 37522260 . - 1 Parent=GSCOCT00005016001 | |
| 29126 chr1 manual_curation CDS 37521844 37521987 . - 0 Parent=GSCOCT00005016001 | |
| 29127 chr1 manual_curation CDS 37521498 37521734 . - 0 Parent=GSCOCT00005016001 | |
| 29128 chr1 manual_curation CDS 37521334 37521402 . - 0 Parent=GSCOCT00005016001 | |
| 29129 chr1 manual_curation CDS 37521125 37521193 . - 0 Parent=GSCOCT00005016001 | |
| 29130 chr1 manual_curation CDS 37520786 37520860 . - 0 Parent=GSCOCT00005016001 | |
| 29131 chr1 manual_curation CDS 37520541 37520669 . - 0 Parent=GSCOCT00005016001 | |
| 29132 chr1 manual_curation CDS 37520356 37520437 . - 0 Parent=GSCOCT00005016001 | |
| 29133 chr1 manual_curation CDS 37520087 37520182 . - 1 Parent=GSCOCT00005016001 | |
| 29134 chr1 manual_curation CDS 37519798 37519971 . - 1 Parent=GSCOCT00005016001 | |
| 29135 chr1 manual_curation CDS 37519592 37519698 . - 1 Parent=GSCOCT00005016001 | |
| 29136 chr1 manual_curation CDS 37519299 37519505 . - 0 Parent=GSCOCT00005016001 | |
| 29137 chr1 manual_curation CDS 37518991 37519127 . - 0 Parent=GSCOCT00005016001 | |
| 29138 chr1 manual_curation CDS 37518660 37518913 . - 2 Parent=GSCOCT00005016001 | |
| 29139 chr1 manual_curation CDS 37518406 37518569 . - 1 Parent=GSCOCT00005016001 | |
| 29140 chr1 manual_curation CDS 37518171 37518332 . - 0 Parent=GSCOCT00005016001 | |
| 29141 chr1 manual_curation CDS 37517304 37517785 . - 0 Parent=GSCOCT00005016001 | |
| 29142 chr1 manual_curation CDS 37517085 37517214 . - 2 Parent=GSCOCT00005016001 | |
| 29143 chr1 manual_curation gene 37532446 37537454 . - . ID=GSCOCG00005015001;Name=Cc01_g21170 | |
| 29144 chr1 manual_curation mRNA 37532446 37537454 . - . ID=GSCOCT00005015001;Parent=GSCOCG00005015001;Name=Cc01_g21170 | |
| 29145 chr1 manual_curation polypeptide 37532698 37536926 . - . ID=GSCOCP00005015001;Dbxref=InterPro:IPR001993,InterPro:IPR002067,InterPro:IPR002113,InterPro:IPR018108,PANTHER:PTHR11896,PFAM:PF00153,PRINTS:PR00926,PRINTS:PR00927,PROFILE:PS50920,SUPERFAMILY:SSF103506,SwissProt:P39953,SwissProt:P40556,SwissProt:Q54FU9,TAIR:AT1G25380.1,TAIR:AT2G47490.1,TAIR:AT5G66380.1,TrEMBL:B9GSE1,TrEMBL:D7U2D9,TrEMBL:I1NB98;Derives_from=GSCOCT00005015001;Name=Cc01_g21170;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0005488,GO:0005743,GO:0006810,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Putative Mitochondrial nicotinamide adenine dinucleotide transporter 1,CC_functional_completeness:fragment,CC_gene:YIA6,CC_gene:mcfW,CC_gene:YEA6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005015001~ Putative Mitochondrial nicotinamide adenine dinucleotide transporter 1~ YIA6~ fragment;original_location=join(656475..656547%2C656800..656895%2C657095..657201%2C657391..657439%2C657743..657852%2C659212..659306%2C659384..659472%2C659668..659762%2C660464..660703);owner=coffea | |
| 29146 chr1 manual_curation exon 37536854 37537454 . - . Parent=GSCOCT00005015001 | |
| 29147 chr1 manual_curation exon 37536506 37536601 . - . Parent=GSCOCT00005015001 | |
| 29148 chr1 manual_curation exon 37536200 37536306 . - . Parent=GSCOCT00005015001 | |
| 29149 chr1 manual_curation exon 37535962 37536010 . - . Parent=GSCOCT00005015001 | |
| 29150 chr1 manual_curation exon 37535549 37535658 . - . Parent=GSCOCT00005015001 | |
| 29151 chr1 manual_curation exon 37534095 37534189 . - . Parent=GSCOCT00005015001 | |
| 29152 chr1 manual_curation exon 37533929 37534017 . - . Parent=GSCOCT00005015001 | |
| 29153 chr1 manual_curation exon 37533639 37533733 . - . Parent=GSCOCT00005015001 | |
| 29154 chr1 manual_curation exon 37532446 37532937 . - . Parent=GSCOCT00005015001 | |
| 29155 chr1 manual_curation CDS 37536854 37536926 . - 0 Parent=GSCOCT00005015001 | |
| 29156 chr1 manual_curation CDS 37536506 37536601 . - 1 Parent=GSCOCT00005015001 | |
| 29157 chr1 manual_curation CDS 37536200 37536306 . - 1 Parent=GSCOCT00005015001 | |
| 29158 chr1 manual_curation CDS 37535962 37536010 . - 0 Parent=GSCOCT00005015001 | |
| 29159 chr1 manual_curation CDS 37535549 37535658 . - 1 Parent=GSCOCT00005015001 | |
| 29160 chr1 manual_curation CDS 37534095 37534189 . - 0 Parent=GSCOCT00005015001 | |
| 29161 chr1 manual_curation CDS 37533929 37534017 . - 2 Parent=GSCOCT00005015001 | |
| 29162 chr1 manual_curation CDS 37533639 37533733 . - 1 Parent=GSCOCT00005015001 | |
| 29163 chr1 manual_curation CDS 37532698 37532937 . - 0 Parent=GSCOCT00005015001 | |
| 29164 chr1 manual_curation gene 37540650 37545864 . + . ID=GSCOCG00005014001;Name=Cc01_g21180 | |
| 29165 chr1 manual_curation mRNA 37540650 37545864 . + . ID=GSCOCT00005014001;Parent=GSCOCG00005014001;Name=Cc01_g21180 | |
| 29166 chr1 manual_curation polypeptide 37540916 37545260 . + . ID=GSCOCP00005014001;Dbxref=InterPro:IPR008507,PFAM:PF05623,TAIR:AT1G15030.1,TAIR:AT4G16100.1,TAIR:AT5G49220.1,TrEMBL:B9RZK3,TrEMBL:F6H6U4,TrEMBL:F6HZ75;Derives_from=GSCOCT00005014001;Name=Cc01_g21180;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of unknown function (DUF789),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005014001~ Putative Protein of unknown function (DUF789)~ unknown_gene~ complete;original_location=complement(join(652120..652485%2C651544..651755%2C648888..649167%2C648702..648787%2C648518..648609%2C648141..648397));owner=coffea | |
| 29167 chr1 manual_curation exon 37545004 37545864 . + . Parent=GSCOCT00005014001 | |
| 29168 chr1 manual_curation exon 37544792 37544883 . + . Parent=GSCOCT00005014001 | |
| 29169 chr1 manual_curation exon 37544614 37544699 . + . Parent=GSCOCT00005014001 | |
| 29170 chr1 manual_curation exon 37544234 37544513 . + . Parent=GSCOCT00005014001 | |
| 29171 chr1 manual_curation exon 37541646 37541857 . + . Parent=GSCOCT00005014001 | |
| 29172 chr1 manual_curation exon 37540650 37541281 . + . Parent=GSCOCT00005014001 | |
| 29173 chr1 manual_curation CDS 37545004 37545260 . + 1 Parent=GSCOCT00005014001 | |
| 29174 chr1 manual_curation CDS 37544792 37544883 . + 2 Parent=GSCOCT00005014001 | |
| 29175 chr1 manual_curation CDS 37544614 37544699 . + 0 Parent=GSCOCT00005014001 | |
| 29176 chr1 manual_curation CDS 37544234 37544513 . + 2 Parent=GSCOCT00005014001 | |
| 29177 chr1 manual_curation CDS 37541646 37541857 . + 0 Parent=GSCOCT00005014001 | |
| 29178 chr1 manual_curation CDS 37540916 37541281 . + 0 Parent=GSCOCT00005014001 | |
| 29179 chr1 manual_curation gene 37551833 37554085 . - . ID=GSCOCG00005010001;Name=Cc01_g21190 | |
| 29180 chr1 manual_curation mRNA 37551833 37554085 . - . ID=GSCOCT00005010001;Parent=GSCOCG00005010001;Name=Cc01_g21190 | |
| 29181 chr1 manual_curation polypeptide 37552573 37553788 . - . ID=GSCOCP00005010001;Dbxref=InterPro:IPR008598,PFAM:PF05605,SwissProt:Q6NM26,SwissProt:Q84J70,SwissProt:Q9FJ17,TAIR:AT3G05700.1,TAIR:AT5G26990.1,TAIR:AT5G49230.1,TrEMBL:C6T3G5,TrEMBL:G7KWI6,TrEMBL:I1NJ44;Derives_from=GSCOCT00005010001;Name=Cc01_g21190;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein DEHYDRATION-INDUCED 19 homolog 3,CC_functional_completeness:fragment,CC_gene:DI19-7,CC_gene:DI19-3,CC_gene:DI19-6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005010001~ Putative Protein DEHYDRATION-INDUCED 19 homolog 3~ DI19-7~ fragment;original_location=join(639613..639703%2C639846..640027%2C640712..640828);owner=coffea | |
| 29182 chr1 manual_curation exon 37553698 37554085 . - . Parent=GSCOCT00005010001 | |
| 29183 chr1 manual_curation exon 37553374 37553555 . - . Parent=GSCOCT00005010001 | |
| 29184 chr1 manual_curation exon 37551833 37552689 . - . Parent=GSCOCT00005010001 | |
| 29185 chr1 manual_curation CDS 37553698 37553788 . - 0 Parent=GSCOCT00005010001 | |
| 29186 chr1 manual_curation CDS 37553374 37553555 . - 1 Parent=GSCOCT00005010001 | |
| 29187 chr1 manual_curation CDS 37552573 37552689 . - 0 Parent=GSCOCT00005010001 | |
| 29188 chr1 manual_curation gene 37559292 37561266 . - . ID=GSCOCG00005008001;Name=Cc01_g21200 | |
| 29189 chr1 manual_curation mRNA 37559292 37561266 . - . ID=GSCOCT00005008001;Parent=GSCOCG00005008001;Name=Cc01_g21200 | |
| 29190 chr1 manual_curation polypeptide 37559432 37560535 . - . ID=GSCOCP00005008001;Dbxref=InterPro:IPR002495,PFAM:PF01501,SwissProt:O04253,SwissProt:Q8VYF4,SwissProt:Q9FWY9,TAIR:AT1G02720.1,TAIR:AT3G62660.1,TAIR:AT4G02130.1,TrEMBL:B9GSE6,TrEMBL:B9I9M9,TrEMBL:I1L7S6;Derives_from=GSCOCT00005008001;Name=Cc01_g21200;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Probable galacturonosyltransferase-like 7,CC_functional_completeness:complete,CC_gene:GATL7,CC_gene:GATL5,CC_gene:GATL6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005008001~ Probable galacturonosyltransferase-like 7~ GATL7~ complete;original_location=632866..633969;owner=coffea | |
| 29191 chr1 manual_curation exon 37559292 37561266 . - . Parent=GSCOCT00005008001 | |
| 29192 chr1 manual_curation CDS 37559432 37560535 . - 0 Parent=GSCOCT00005008001 | |
| 29193 chr1 manual_curation gene 37572611 37574052 . - . ID=GSCOCG00005007001;Name=Cc01_g21210 | |
| 29194 chr1 manual_curation mRNA 37572611 37574052 . - . ID=GSCOCT00005007001;Parent=GSCOCG00005007001;Name=Cc01_g21210 | |
| 29195 chr1 manual_curation polypeptide 37573322 37573804 . - . ID=GSCOCP00005007001;Dbxref=TAIR:AT2G47485.1,TAIR:AT3G62650.2,TrEMBL:A5BS11,TrEMBL:B9RNJ2,TrEMBL:I1L7S5;Derives_from=GSCOCT00005007001;Name=Cc01_g21210;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005007001~ Putative unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G62650.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink).~ unknown_gene~ modules;original_location=619597..620079;owner=coffea | |
| 29196 chr1 manual_curation exon 37572611 37574052 . - . Parent=GSCOCT00005007001 | |
| 29197 chr1 manual_curation CDS 37573322 37573804 . - 0 Parent=GSCOCT00005007001 | |
| 29198 chr1 manual_curation gene 37581218 37582201 . - . ID=GSCOCG00005006001;Name=Cc01_g21220 | |
| 29199 chr1 manual_curation mRNA 37581218 37582201 . - . ID=GSCOCT00005006001;Parent=GSCOCG00005006001;Name=Cc01_g21220 | |
| 29200 chr1 manual_curation polypeptide 37581645 37582121 . - . ID=GSCOCP00005006001;Dbxref=GENE3D:G3DSA:1.10.10.10,InterPro:IPR005818,InterPro:IPR011991,PFAM:PF00538,SMART:SM00526,SwissProt:P23444,SwissProt:P26569,SwissProt:P27806,TAIR:AT2G30620.1,TrEMBL:B9RNJ1,TrEMBL:C6SYC5,TrEMBL:I1JBI7;Derives_from=GSCOCT00005006001;Name=Cc01_g21220;Ontology_term=CC_evidence_code:ISS,GO:0000786,GO:0003677,GO:0005634,GO:0006334,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:At2g30620;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005006001~ Hypothetical protein~ At2g30620~ missing_functional_completeness;original_location=join(611280..611360%2C611436..611756);owner=coffea | |
| 29201 chr1 manual_curation exon 37582041 37582201 . - . Parent=GSCOCT00005006001 | |
| 29202 chr1 manual_curation exon 37581218 37581965 . - . Parent=GSCOCT00005006001 | |
| 29203 chr1 manual_curation CDS 37582041 37582121 . - 0 Parent=GSCOCT00005006001 | |
| 29204 chr1 manual_curation CDS 37581645 37581965 . - 0 Parent=GSCOCT00005006001 | |
| 29205 chr1 manual_curation gene 37582952 37584382 . - . ID=GSCOCG00005005001;Name=Cc01_g21230 | |
| 29206 chr1 manual_curation mRNA 37582952 37584382 . - . ID=GSCOCT00005005001;Parent=GSCOCG00005005001;Name=Cc01_g21230 | |
| 29207 chr1 manual_curation polypeptide 37583332 37583685 . - . ID=GSCOCP00005005001;Derives_from=GSCOCT00005005001;Name=Cc01_g21230;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005005001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=609716..610069;owner=coffea | |
| 29208 chr1 manual_curation exon 37582952 37584382 . - . Parent=GSCOCT00005005001 | |
| 29209 chr1 manual_curation CDS 37583332 37583685 . - 0 Parent=GSCOCT00005005001 | |
| 29210 chr1 manual_curation gene 37584684 37586876 . - . ID=GSCOCG00005004001;Name=Cc01_g21240 | |
| 29211 chr1 manual_curation mRNA 37584684 37586876 . - . ID=GSCOCT00005004001;Parent=GSCOCG00005004001;Name=Cc01_g21240 | |
| 29212 chr1 manual_curation polypeptide 37585962 37586729 . - . ID=GSCOCP00005004001;Dbxref=TAIR:AT1G02700.1,TrEMBL:A5BS13,TrEMBL:B9I9M6,TrEMBL:D7U2F0;Derives_from=GSCOCT00005004001;Name=Cc01_g21240;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005004001~ Putative unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: mitochondrion%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02140.1)%3B Has 49 Blast hits to 49 proteins in 21 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 10%3B Fungi - 6%3B Plants - 29%3B Viruses - 0%3B Other Eukaryotes - 4 (source: NCBI BLink).~ unknown_gene~ complete;original_location=606672..607439;owner=coffea | |
| 29213 chr1 manual_curation exon 37584684 37586876 . - . Parent=GSCOCT00005004001 | |
| 29214 chr1 manual_curation CDS 37585962 37586729 . - 0 Parent=GSCOCT00005004001 | |
| 29215 chr1 manual_curation gene 37626024 37628570 . - . ID=GSCOCG00005003001;Name=Cc01_g21250 | |
| 29216 chr1 manual_curation mRNA 37626024 37628570 . - . ID=GSCOCT00005003001;Parent=GSCOCG00005003001;Name=Cc01_g21250 | |
| 29217 chr1 manual_curation polypeptide 37626363 37628275 . - . ID=GSCOCP00005003001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001005,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR014778,InterPro:IPR015495,InterPro:IPR017930,PANTHER:PTHR10641,PFAM:PF00249,PROFILE:PS51294,SMART:SM00717,SUPERFAMILY:SSF46689,SwissProt:O22264,SwissProt:P27898,SwissProt:Q9SZP1,TAIR:AT2G47460.1,TAIR:AT3G62610.1,TAIR:AT5G49330.1,TrEMBL:B9I9L1,TrEMBL:O49019,TrEMBL:Q70RD3;Derives_from=GSCOCT00005003001;Name=Cc01_g21250;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative MYB1 protein,CC_functional_completeness:complete,CC_gene:MYB12,CC_gene:P,CC_gene:MYB4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005003001~ Putative MYB1 protein~ MYB12~ complete;original_location=join(565126..565258%2C565419..565548%2C565985..567038);owner=coffea | |
| 29218 chr1 manual_curation exon 37628143 37628570 . - . Parent=GSCOCT00005003001 | |
| 29219 chr1 manual_curation exon 37627853 37627982 . - . Parent=GSCOCT00005003001 | |
| 29220 chr1 manual_curation exon 37626024 37627416 . - . Parent=GSCOCT00005003001 | |
| 29221 chr1 manual_curation CDS 37628143 37628275 . - 0 Parent=GSCOCT00005003001 | |
| 29222 chr1 manual_curation CDS 37627853 37627982 . - 1 Parent=GSCOCT00005003001 | |
| 29223 chr1 manual_curation CDS 37626363 37627416 . - 2 Parent=GSCOCT00005003001 | |
| 29224 chr1 manual_curation gene 37633044 37639520 . + . ID=GSCOCG00005001001;Name=Cc01_g21260 | |
| 29225 chr1 manual_curation mRNA 37633044 37639520 . + . ID=GSCOCT00005001001;Parent=GSCOCG00005001001;Name=Cc01_g21260 | |
| 29226 chr1 manual_curation polypeptide 37633300 37638642 . + . ID=GSCOCP00005001001;Dbxref=GENE3D:G3DSA:1.10.287.110,InterPro:IPR001623,InterPro:IPR002939,InterPro:IPR003095,InterPro:IPR008971,InterPro:IPR015609,InterPro:IPR018253,PANTHER:PTHR11821,PFAM:PF00226,PFAM:PF01556,PRINTS:PR00625,PROFILE:PS50076,PROSITE:PS00636,SMART:SM00271,SUPERFAMILY:SSF46565,SUPERFAMILY:SSF49493,SwissProt:Q5RAJ6,SwissProt:Q6TUG0,SwissProt:Q99KV1,TAIR:AT2G20560.1,TAIR:AT3G08910.1,TAIR:AT3G62600.1,TrEMBL:A5BIW0,TrEMBL:I1JQQ6,TrEMBL:I1NBB0;Derives_from=GSCOCT00005001001;Name=Cc01_g21260;Ontology_term=CC_evidence_code:ISS,GO:0006457,GO:0031072,GO:0051082,CC_EC_number:missing_EC_number,PRODUCT:Putative DnaJ homolog subfamily B member 11,CC_functional_completeness:complete,CC_gene:Dnajb11,CC_gene:DNAJB11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00005001001~ Putative DnaJ homolog subfamily B member 11~ Dnajb11~ complete;original_location=complement(join(560028..560101%2C559794..559942%2C559563..559689%2C558378..558489%2C557938..558054%2C557719..557805%2C556526..556585%2C556352..556429%2C555367..555438%2C554759..554917));owner=coffea | |
| 29227 chr1 manual_curation exon 37638484 37639520 . + . Parent=GSCOCT00005001001 | |
| 29228 chr1 manual_curation exon 37637963 37638034 . + . Parent=GSCOCT00005001001 | |
| 29229 chr1 manual_curation exon 37636972 37637049 . + . Parent=GSCOCT00005001001 | |
| 29230 chr1 manual_curation exon 37636816 37636875 . + . Parent=GSCOCT00005001001 | |
| 29231 chr1 manual_curation exon 37635596 37635682 . + . Parent=GSCOCT00005001001 | |
| 29232 chr1 manual_curation exon 37635347 37635463 . + . Parent=GSCOCT00005001001 | |
| 29233 chr1 manual_curation exon 37634912 37635023 . + . Parent=GSCOCT00005001001 | |
| 29234 chr1 manual_curation exon 37633712 37633838 . + . Parent=GSCOCT00005001001 | |
| 29235 chr1 manual_curation exon 37633459 37633607 . + . Parent=GSCOCT00005001001 | |
| 29236 chr1 manual_curation exon 37633044 37633373 . + . Parent=GSCOCT00005001001 | |
| 29237 chr1 manual_curation CDS 37638484 37638642 . + 0 Parent=GSCOCT00005001001 | |
| 29238 chr1 manual_curation CDS 37637963 37638034 . + 0 Parent=GSCOCT00005001001 | |
| 29239 chr1 manual_curation CDS 37636972 37637049 . + 0 Parent=GSCOCT00005001001 | |
| 29240 chr1 manual_curation CDS 37636816 37636875 . + 0 Parent=GSCOCT00005001001 | |
| 29241 chr1 manual_curation CDS 37635596 37635682 . + 0 Parent=GSCOCT00005001001 | |
| 29242 chr1 manual_curation CDS 37635347 37635463 . + 0 Parent=GSCOCT00005001001 | |
| 29243 chr1 manual_curation CDS 37634912 37635023 . + 2 Parent=GSCOCT00005001001 | |
| 29244 chr1 manual_curation CDS 37633712 37633838 . + 1 Parent=GSCOCT00005001001 | |
| 29245 chr1 manual_curation CDS 37633459 37633607 . + 2 Parent=GSCOCT00005001001 | |
| 29246 chr1 manual_curation CDS 37633300 37633373 . + 0 Parent=GSCOCT00005001001 | |
| 29247 chr1 manual_curation gene 37642136 37645792 . + . ID=GSCOCG00004999001;Name=Cc01_g21270 | |
| 29248 chr1 manual_curation mRNA 37642136 37645792 . + . ID=GSCOCT00004999001;Parent=GSCOCG00004999001;Name=Cc01_g21270 | |
| 29249 chr1 manual_curation polypeptide 37642136 37645383 . + . ID=GSCOCP00004999001;Dbxref=InterPro:IPR002921,PFAM:PF01764,TAIR:AT1G02660.1,TAIR:AT3G61680.1,TAIR:AT3G62590.1,TrEMBL:B9RNG5,TrEMBL:I1JBH3,TrEMBL:I1L7R1;Derives_from=GSCOCT00004999001;Name=Cc01_g21270;Ontology_term=CC_evidence_code:ISS,GO:0004806,GO:0006629,CC_EC_number:missing_EC_number,PRODUCT:alpha/beta-Hydrolases superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004999001~ alpha/beta-Hydrolases superfamily protein~ unknown_gene~ complete;original_location=complement(join(550585..551265%2C549413..549976%2C549240..549299%2C548679..549092%2C548018..548596));owner=coffea | |
| 29250 chr1 manual_curation exon 37644805 37645792 . + . Parent=GSCOCT00004999001 | |
| 29251 chr1 manual_curation exon 37644309 37644722 . + . Parent=GSCOCT00004999001 | |
| 29252 chr1 manual_curation exon 37644102 37644161 . + . Parent=GSCOCT00004999001 | |
| 29253 chr1 manual_curation exon 37643425 37643988 . + . Parent=GSCOCT00004999001 | |
| 29254 chr1 manual_curation exon 37642136 37642816 . + . Parent=GSCOCT00004999001 | |
| 29255 chr1 manual_curation CDS 37644805 37645383 . + 0 Parent=GSCOCT00004999001 | |
| 29256 chr1 manual_curation CDS 37644309 37644722 . + 0 Parent=GSCOCT00004999001 | |
| 29257 chr1 manual_curation CDS 37644102 37644161 . + 0 Parent=GSCOCT00004999001 | |
| 29258 chr1 manual_curation CDS 37643425 37643988 . + 0 Parent=GSCOCT00004999001 | |
| 29259 chr1 manual_curation CDS 37642136 37642816 . + 0 Parent=GSCOCT00004999001 | |
| 29260 chr1 manual_curation gene 37648768 37652327 . - . ID=GSCOCG00004998001;Name=Cc01_g21280 | |
| 29261 chr1 manual_curation mRNA 37648768 37652327 . - . ID=GSCOCT00004998001;Parent=GSCOCG00004998001;Name=Cc01_g21280 | |
| 29262 chr1 manual_curation polypeptide 37649142 37652189 . - . ID=GSCOCP00004998001;Dbxref=SwissProt:Q28GF8,SwissProt:Q5REM8,SwissProt:Q6GPW4,TAIR:AT3G62580.1,TrEMBL:A5AS62,TrEMBL:A9PD72,TrEMBL:C6SXE8;Derives_from=GSCOCT00004998001;Name=Cc01_g21280;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Transmembrane protein 205,CC_functional_completeness:modules,CC_gene:tmem205,CC_gene:TMEM205;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004998001~ Putative Transmembrane protein 205~ tmem205~ modules;original_location=join(541212..541429%2C541566..541785%2C544044..544259);owner=coffea | |
| 29263 chr1 manual_curation exon 37651972 37652327 . - . Parent=GSCOCT00004998001 | |
| 29264 chr1 manual_curation exon 37651616 37651835 . - . Parent=GSCOCT00004998001 | |
| 29265 chr1 manual_curation exon 37648768 37649357 . - . Parent=GSCOCT00004998001 | |
| 29266 chr1 manual_curation CDS 37651972 37652189 . - 0 Parent=GSCOCT00004998001 | |
| 29267 chr1 manual_curation CDS 37651616 37651835 . - 2 Parent=GSCOCT00004998001 | |
| 29268 chr1 manual_curation CDS 37649142 37649357 . - 0 Parent=GSCOCT00004998001 | |
| 29269 chr1 manual_curation gene 37657576 37660351 . - . ID=GSCOCG00004997001;Name=Cc01_g21290 | |
| 29270 chr1 manual_curation mRNA 37657576 37660351 . - . ID=GSCOCT00004997001;Parent=GSCOCG00004997001;Name=Cc01_g21290 | |
| 29271 chr1 manual_curation polypeptide 37657839 37660124 . - . ID=GSCOCP00004997001;Dbxref=GENE3D:G3DSA:1.25.40.10,InterPro:IPR001440,InterPro:IPR001623,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR019734,PFAM:PF00226,PFAM:PF00515,PROFILE:PS50005,PROFILE:PS50293,SMART:SM00028,TAIR:AT2G47440.1,TAIR:AT3G62570.1,TAIR:AT4G02100.1,TrEMBL:D7U2G8,TrEMBL:I1JQQ9,TrEMBL:I1NBB4;Derives_from=GSCOCT00004997001;Name=Cc01_g21290;Ontology_term=CC_evidence_code:ISS,GO:0005488,GO:0031072,CC_EC_number:missing_EC_number,PRODUCT:Heat shock protein DnaJ with tetratricopeptide repeat,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004997001~ Heat shock protein DnaJ with tetratricopeptide repeat~ unknown_gene~ complete;original_location=join(533277..533363%2C533512..533918%2C534308..535562);owner=coffea | |
| 29272 chr1 manual_curation exon 37660038 37660351 . - . Parent=GSCOCT00004997001 | |
| 29273 chr1 manual_curation exon 37659483 37659889 . - . Parent=GSCOCT00004997001 | |
| 29274 chr1 manual_curation exon 37657576 37659093 . - . Parent=GSCOCT00004997001 | |
| 29275 chr1 manual_curation CDS 37660038 37660124 . - 0 Parent=GSCOCT00004997001 | |
| 29276 chr1 manual_curation CDS 37659483 37659889 . - 0 Parent=GSCOCT00004997001 | |
| 29277 chr1 manual_curation CDS 37657839 37659093 . - 2 Parent=GSCOCT00004997001 | |
| 29278 chr1 manual_curation gene 37669277 37669429 . + . ID=GSCOCG00004995001;Name=Cc01_g21300 | |
| 29279 chr1 manual_curation mRNA 37669277 37669429 . + . ID=GSCOCT00004995001;Parent=GSCOCG00004995001;Name=Cc01_g21300 | |
| 29280 chr1 manual_curation polypeptide 37669277 37669429 . + . ID=GSCOCP00004995001;Dbxref=InterPro:IPR001023,InterPro:IPR013126,PANTHER:PTHR19375,PFAM:PF00012,SwissProt:Q02028,SwissProt:Q9LTX9,SwissProt:Q9STW6,TAIR:AT4G24280.1,TAIR:AT5G49910.1;Derives_from=GSCOCT00004995001;Name=Cc01_g21300;Ontology_term=CC_evidence_code:ISS,GO:0005524,CC_EC_number:missing_EC_number,PRODUCT:Stromal 70 kDa heat shock-related protein%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:HSP70,CC_gene:HSP70-6,CC_gene:HSP70-7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004995001~ Stromal 70 kDa heat shock-related protein%2C chloroplastic~ HSP70~ fragment;original_location=complement(523972..524124);owner=coffea | |
| 29281 chr1 manual_curation exon 37669277 37669429 . + . Parent=GSCOCT00004995001 | |
| 29282 chr1 manual_curation CDS 37669277 37669429 . + 0 Parent=GSCOCT00004995001 | |
| 29283 chr1 manual_curation gene 37670055 37671020 . - . ID=GSCOCG00004994001;Name=Cc01_g21310 | |
| 29284 chr1 manual_curation mRNA 37670055 37671020 . - . ID=GSCOCT00004994001;Parent=GSCOCG00004994001;Name=Cc01_g21310 | |
| 29285 chr1 manual_curation polypeptide 37670433 37671020 . - . ID=GSCOCP00004994001;Dbxref=SwissProt:P83344,SwissProt:Q94KD8,SwissProt:Q9FGY1,TAIR:AT1G02640.1,TAIR:AT5G49360.1,TAIR:AT5G64570.1,TrEMBL:B9GSH5,TrEMBL:D7U2G9,TrEMBL:I1JBG9;Derives_from=GSCOCT00004994001;Name=Cc01_g21310;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Probable beta-D-xylosidase 2,CC_functional_completeness:fragment,CC_gene:BXL2,CC_gene:BXL1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004994001~ Probable beta-D-xylosidase 2~ BXL2~ fragment;original_location=522381..522968;owner=coffea | |
| 29286 chr1 manual_curation exon 37670055 37671020 . - . Parent=GSCOCT00004994001 | |
| 29287 chr1 manual_curation CDS 37670433 37671020 . - 0 Parent=GSCOCT00004994001 | |
| 29288 chr1 manual_curation gene 37671141 37674639 . - . ID=GSCOCG00004993001;Name=Cc01_g21320 | |
| 29289 chr1 manual_curation mRNA 37671141 37674639 . - . ID=GSCOCT00004993001;Parent=GSCOCG00004993001;Name=Cc01_g21320 | |
| 29290 chr1 manual_curation polypeptide 37671141 37674639 . - . ID=GSCOCP00004993001;Dbxref=GENE3D:G3DSA:3.20.20.300,InterPro:IPR001764,InterPro:IPR002772,InterPro:IPR017853,PFAM:PF00933,PFAM:PF01915,PRINTS:PR00133,SUPERFAMILY:SSF51445,SUPERFAMILY:SSF52279,SwissProt:Q94KD8,SwissProt:Q9FGY1,SwissProt:Q9FLG1,TAIR:AT1G02640.1,TAIR:AT5G49360.1,TAIR:AT5G64570.1,TrEMBL:B9RNG1,TrEMBL:G7KSS4,TrEMBL:H1AC31;Derives_from=GSCOCT00004993001;Name=Cc01_g21320;Ontology_term=CC_evidence_code:ISS,GO:0005975,CC_EC_number:3.2.1.21,PRODUCT:Probable beta-D-xylosidase 2,CC_functional_completeness:fragment,CC_gene:BXL2,CC_gene:BXL1,CC_gene:BXL4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004993001~ Probable beta-D-xylosidase 2~ BXL2~ fragment;original_location=join(518762..519370%2C519916..520197%2C520901..521070%2C521194..521642%2C521839..522260);owner=coffea | |
| 29291 chr1 manual_curation exon 37674031 37674639 . - . Parent=GSCOCT00004993001 | |
| 29292 chr1 manual_curation exon 37673204 37673485 . - . Parent=GSCOCT00004993001 | |
| 29293 chr1 manual_curation exon 37672331 37672500 . - . Parent=GSCOCT00004993001 | |
| 29294 chr1 manual_curation exon 37671759 37672207 . - . Parent=GSCOCT00004993001 | |
| 29295 chr1 manual_curation exon 37671141 37671562 . - . Parent=GSCOCT00004993001 | |
| 29296 chr1 manual_curation CDS 37674031 37674639 . - 0 Parent=GSCOCT00004993001 | |
| 29297 chr1 manual_curation CDS 37673204 37673485 . - 0 Parent=GSCOCT00004993001 | |
| 29298 chr1 manual_curation CDS 37672331 37672500 . - 0 Parent=GSCOCT00004993001 | |
| 29299 chr1 manual_curation CDS 37671759 37672207 . - 2 Parent=GSCOCT00004993001 | |
| 29300 chr1 manual_curation CDS 37671141 37671562 . - 1 Parent=GSCOCT00004993001 | |
| 29301 chr1 manual_curation gene 37682661 37683656 . - . ID=GSCOCG00004992001;Name=Cc01_g21330 | |
| 29302 chr1 manual_curation mRNA 37682661 37683656 . - . ID=GSCOCT00004992001;Parent=GSCOCG00004992001;Name=Cc01_g21330 | |
| 29303 chr1 manual_curation polypeptide 37682661 37683344 . - . ID=GSCOCP00004992001;Dbxref=TAIR:AT4G02090.1,TrEMBL:B9GSR7,TrEMBL:B9RNG0,TrEMBL:F6HZ92;Derives_from=GSCOCT00004992001;Name=Cc01_g21330;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004992001~ Putative unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: N-terminal protein myristoylation%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: root%3B Has 132 Blast hits to 132 proteins in 12 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 132%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=510057..510740;owner=coffea | |
| 29304 chr1 manual_curation exon 37682661 37683656 . - . Parent=GSCOCT00004992001 | |
| 29305 chr1 manual_curation CDS 37682661 37683344 . - 0 Parent=GSCOCT00004992001 | |
| 29306 chr1 manual_curation gene 37686640 37691398 . - . ID=GSCOCG00004991001;Name=Cc01_g21340 | |
| 29307 chr1 manual_curation mRNA 37686640 37691398 . - . ID=GSCOCT00004991001;Parent=GSCOCG00004991001;Name=Cc01_g21340 | |
| 29308 chr1 manual_curation polypeptide 37687638 37690228 . - . ID=GSCOCP00004991001;Dbxref=InterPro:IPR005225,InterPro:IPR006687,InterPro:IPR006688,InterPro:IPR006689,PANTHER:PTHR11711,PANTHER:PTHR11711:SF12,PFAM:PF00025,PRINTS:PR00328,PROFILE:PS51422,SMART:SM00177,SMART:SM00178,SwissProt:O04266,SwissProt:O04834,SwissProt:Q01474,TAIR:AT1G56330.1,TAIR:AT3G62560.1,TAIR:AT4G02080.1,TIGRFAMs:TIGR00231,TrEMBL:B9RNF8,TrEMBL:D7U2H1,TrEMBL:Q38M59;Derives_from=GSCOCT00004991001;Name=Cc01_g21340;Ontology_term=CC_evidence_code:ISS,GO:0005525,GO:0005622,GO:0006886,GO:0007264,CC_EC_number:missing_EC_number,PRODUCT:GTP-binding protein SAR1A,CC_functional_completeness:complete,CC_gene:SAR1A,CC_gene:SAR1B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004991001~ GTP-binding protein SAR1A~ SAR1A~ complete;original_location=join(503173..503301%2C503425..503556%2C505443..505763);owner=coffea | |
| 29309 chr1 manual_curation exon 37690100 37691398 . - . Parent=GSCOCT00004991001 | |
| 29310 chr1 manual_curation exon 37689845 37689976 . - . Parent=GSCOCT00004991001 | |
| 29311 chr1 manual_curation exon 37686640 37687958 . - . Parent=GSCOCT00004991001 | |
| 29312 chr1 manual_curation CDS 37690100 37690228 . - 0 Parent=GSCOCT00004991001 | |
| 29313 chr1 manual_curation CDS 37689845 37689976 . - 0 Parent=GSCOCT00004991001 | |
| 29314 chr1 manual_curation CDS 37687638 37687958 . - 0 Parent=GSCOCT00004991001 | |
| 29315 chr1 manual_curation gene 37701268 37704383 . + . ID=GSCOCG00004990001;Name=Cc01_g21350 | |
| 29316 chr1 manual_curation mRNA 37701268 37704383 . + . ID=GSCOCT00004990001;Parent=GSCOCG00004990001;Name=Cc01_g21350 | |
| 29317 chr1 manual_curation polypeptide 37701468 37704257 . + . ID=GSCOCP00004990001;Dbxref=InterPro:IPR011016,InterPro:IPR018957,InterPro:IPR022143,PFAM:PF00097,PFAM:PF12428,PROFILE:PS51292,SMART:SM00744,TAIR:AT1G02610.1,TAIR:AT2G01275.1,TAIR:AT4G02075.1,TrEMBL:D7U2H4,TrEMBL:G7KST0,TrEMBL:I1NBB9;Derives_from=GSCOCT00004990001;Name=Cc01_g21350;Ontology_term=CC_evidence_code:ISS,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative RING/FYVE/PHD zinc finger superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004990001~ Putative RING/FYVE/PHD zinc finger superfamily protein~ unknown_gene~ complete;original_location=complement(join(491742..491933%2C491485..491556%2C490611..490687%2C490041..490173%2C489807..489887%2C489393..489494%2C489144..489197));owner=coffea | |
| 29318 chr1 manual_curation exon 37704204 37704383 . + . Parent=GSCOCT00004990001 | |
| 29319 chr1 manual_curation exon 37703907 37704008 . + . Parent=GSCOCT00004990001 | |
| 29320 chr1 manual_curation exon 37703514 37703594 . + . Parent=GSCOCT00004990001 | |
| 29321 chr1 manual_curation exon 37703228 37703360 . + . Parent=GSCOCT00004990001 | |
| 29322 chr1 manual_curation exon 37702714 37702790 . + . Parent=GSCOCT00004990001 | |
| 29323 chr1 manual_curation exon 37701845 37701916 . + . Parent=GSCOCT00004990001 | |
| 29324 chr1 manual_curation exon 37701268 37701659 . + . Parent=GSCOCT00004990001 | |
| 29325 chr1 manual_curation CDS 37704204 37704257 . + 0 Parent=GSCOCT00004990001 | |
| 29326 chr1 manual_curation CDS 37703907 37704008 . + 0 Parent=GSCOCT00004990001 | |
| 29327 chr1 manual_curation CDS 37703514 37703594 . + 0 Parent=GSCOCT00004990001 | |
| 29328 chr1 manual_curation CDS 37703228 37703360 . + 2 Parent=GSCOCT00004990001 | |
| 29329 chr1 manual_curation CDS 37702714 37702790 . + 0 Parent=GSCOCT00004990001 | |
| 29330 chr1 manual_curation CDS 37701845 37701916 . + 0 Parent=GSCOCT00004990001 | |
| 29331 chr1 manual_curation CDS 37701468 37701659 . + 0 Parent=GSCOCT00004990001 | |
| 29332 chr1 manual_curation gene 37704570 37715270 . - . ID=GSCOCG00004989001;Name=Cc01_g21360 | |
| 29333 chr1 manual_curation mRNA 37704570 37715270 . - . ID=GSCOCT00004989001;Parent=GSCOCG00004989001;Name=Cc01_g21360 | |
| 29334 chr1 manual_curation polypeptide 37704862 37714909 . - . ID=GSCOCP00004989001;Dbxref=GENE3D:G3DSA:3.40.1170.10,InterPro:IPR000432,InterPro:IPR007695,InterPro:IPR007696,InterPro:IPR007860,InterPro:IPR007861,InterPro:IPR015536,InterPro:IPR016151,InterPro:IPR017261,PANTHER:PTHR11361,PANTHER:PTHR11361:SF31,PFAM:PF00488,PFAM:PF01624,PFAM:PF05188,PFAM:PF05190,PFAM:PF05192,PIR:PIRSF037677,SMART:SM00533,SMART:SM00534,SUPERFAMILY:SSF48334,SUPERFAMILY:SSF53150,SUPERFAMILY:SSF55271,SwissProt:O04716,SwissProt:P52701,SwissProt:P54276,TAIR:AT3G24495.1,TAIR:AT4G02070.1,TAIR:AT4G25540.1,TrEMBL:B9RNF5,TrEMBL:F6HZ94,TrEMBL:Q6DQL6;Derives_from=GSCOCT00004989001;Name=Cc01_g21360;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006298,GO:0030983,CC_EC_number:missing_EC_number,PRODUCT:DNA mismatch repair protein Msh6-1,CC_functional_completeness:complete,CC_gene:MSH6-1,CC_gene:Msh6,CC_gene:MSH6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004989001~ DNA mismatch repair protein Msh6-1~ MSH6-1~ complete;original_location=join(478492..479332%2C479931..480024%2C480767..480869%2C480958..481011%2C481114..481188%2C481397..481465%2C481574..481657%2C481768..481962%2C482413..482960%2C483049..483178%2C484154..484245%2C484332..484510%2C484588..484790%2C484880..484981%2C485643..485805%2C486418..486707%2C486781..486918%2C487245..487324%2C487420..487519%2C487724..487853%2C488307..488539);owner=coffea | |
| 29335 chr1 manual_curation exon 37714069 37715270 . - . Parent=GSCOCT00004989001 | |
| 29336 chr1 manual_curation exon 37713377 37713470 . - . Parent=GSCOCT00004989001 | |
| 29337 chr1 manual_curation exon 37712532 37712634 . - . Parent=GSCOCT00004989001 | |
| 29338 chr1 manual_curation exon 37712390 37712443 . - . Parent=GSCOCT00004989001 | |
| 29339 chr1 manual_curation exon 37712213 37712287 . - . Parent=GSCOCT00004989001 | |
| 29340 chr1 manual_curation exon 37711936 37712004 . - . Parent=GSCOCT00004989001 | |
| 29341 chr1 manual_curation exon 37711744 37711827 . - . Parent=GSCOCT00004989001 | |
| 29342 chr1 manual_curation exon 37711439 37711633 . - . Parent=GSCOCT00004989001 | |
| 29343 chr1 manual_curation exon 37710441 37710988 . - . Parent=GSCOCT00004989001 | |
| 29344 chr1 manual_curation exon 37710223 37710352 . - . Parent=GSCOCT00004989001 | |
| 29345 chr1 manual_curation exon 37709156 37709247 . - . Parent=GSCOCT00004989001 | |
| 29346 chr1 manual_curation exon 37708891 37709069 . - . Parent=GSCOCT00004989001 | |
| 29347 chr1 manual_curation exon 37708611 37708813 . - . Parent=GSCOCT00004989001 | |
| 29348 chr1 manual_curation exon 37708420 37708521 . - . Parent=GSCOCT00004989001 | |
| 29349 chr1 manual_curation exon 37707596 37707758 . - . Parent=GSCOCT00004989001 | |
| 29350 chr1 manual_curation exon 37706694 37706983 . - . Parent=GSCOCT00004989001 | |
| 29351 chr1 manual_curation exon 37706483 37706620 . - . Parent=GSCOCT00004989001 | |
| 29352 chr1 manual_curation exon 37706077 37706156 . - . Parent=GSCOCT00004989001 | |
| 29353 chr1 manual_curation exon 37705882 37705981 . - . Parent=GSCOCT00004989001 | |
| 29354 chr1 manual_curation exon 37705548 37705677 . - . Parent=GSCOCT00004989001 | |
| 29355 chr1 manual_curation exon 37704570 37705094 . - . Parent=GSCOCT00004989001 | |
| 29356 chr1 manual_curation CDS 37714069 37714909 . - 0 Parent=GSCOCT00004989001 | |
| 29357 chr1 manual_curation CDS 37713377 37713470 . - 1 Parent=GSCOCT00004989001 | |
| 29358 chr1 manual_curation CDS 37712532 37712634 . - 2 Parent=GSCOCT00004989001 | |
| 29359 chr1 manual_curation CDS 37712390 37712443 . - 0 Parent=GSCOCT00004989001 | |
| 29360 chr1 manual_curation CDS 37712213 37712287 . - 0 Parent=GSCOCT00004989001 | |
| 29361 chr1 manual_curation CDS 37711936 37712004 . - 0 Parent=GSCOCT00004989001 | |
| 29362 chr1 manual_curation CDS 37711744 37711827 . - 0 Parent=GSCOCT00004989001 | |
| 29363 chr1 manual_curation CDS 37711439 37711633 . - 0 Parent=GSCOCT00004989001 | |
| 29364 chr1 manual_curation CDS 37710441 37710988 . - 0 Parent=GSCOCT00004989001 | |
| 29365 chr1 manual_curation CDS 37710223 37710352 . - 2 Parent=GSCOCT00004989001 | |
| 29366 chr1 manual_curation CDS 37709156 37709247 . - 0 Parent=GSCOCT00004989001 | |
| 29367 chr1 manual_curation CDS 37708891 37709069 . - 2 Parent=GSCOCT00004989001 | |
| 29368 chr1 manual_curation CDS 37708611 37708813 . - 1 Parent=GSCOCT00004989001 | |
| 29369 chr1 manual_curation CDS 37708420 37708521 . - 0 Parent=GSCOCT00004989001 | |
| 29370 chr1 manual_curation CDS 37707596 37707758 . - 0 Parent=GSCOCT00004989001 | |
| 29371 chr1 manual_curation CDS 37706694 37706983 . - 1 Parent=GSCOCT00004989001 | |
| 29372 chr1 manual_curation CDS 37706483 37706620 . - 0 Parent=GSCOCT00004989001 | |
| 29373 chr1 manual_curation CDS 37706077 37706156 . - 0 Parent=GSCOCT00004989001 | |
| 29374 chr1 manual_curation CDS 37705882 37705981 . - 2 Parent=GSCOCT00004989001 | |
| 29375 chr1 manual_curation CDS 37705548 37705677 . - 0 Parent=GSCOCT00004989001 | |
| 29376 chr1 manual_curation CDS 37704862 37705094 . - 1 Parent=GSCOCT00004989001 | |
| 29377 chr1 manual_curation gene 37718372 37734524 . - . ID=GSCOCG00004987001;Name=Cc01_g21370 | |
| 29378 chr1 manual_curation mRNA 37718372 37734524 . - . ID=GSCOCT00004987001;Parent=GSCOCG00004987001;Name=Cc01_g21370 | |
| 29379 chr1 manual_curation polypeptide 37718790 37733458 . - . ID=GSCOCP00004987001;Dbxref=GENE3D:G3DSA:1.20.920.10,GENE3D:G3DSA:2.130.10.10,InterPro:IPR001487,InterPro:IPR001680,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019775,InterPro:IPR019781,InterPro:IPR019782,PFAM:PF00400,PROFILE:PS50082,PROFILE:PS50294,PROSITE:PS00678,SMART:SM00320,SUPERFAMILY:SSF47370,SwissProt:Q8VDD9,SwissProt:Q921C3,SwissProt:Q9NSI6,TAIR:AT2G47410.1,TAIR:AT5G49430.1,TAIR:AT5G52820.1,TrEMBL:F4IL43,TrEMBL:F4IL44,TrEMBL:F6HZ98;Derives_from=GSCOCT00004987001;Name=Cc01_g21370;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.7.11.7,PRODUCT:WD40/YVTN repeat-like-containing domain%3BBromodomain,CC_functional_completeness:complete,CC_gene:Brwd1,CC_gene:BRWD1,CC_gene:Phip;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004987001~ WD40/YVTN repeat-like-containing domain%3BBromodomain~ Brwd1~ complete;original_location=join(459943..459975%2C460330..460673%2C461186..461340%2C462115..462354%2C462576..462685%2C462804..462881%2C462978..463084%2C464222..464316%2C464403..464536%2C465284..465387%2C465490..465567%2C465691..465769%2C467391..467559%2C469379..469449%2C469778..469858%2C469974..470044%2C470361..470457%2C470549..470608%2C470725..470779%2C470868..471265%2C471339..471962%2C472107..472817%2C472956..473528%2C473700..473758%2C474416..474611);owner=coffea | |
| 29380 chr1 manual_curation exon 37733426 37734524 . - . Parent=GSCOCT00004987001 | |
| 29381 chr1 manual_curation exon 37732728 37733071 . - . Parent=GSCOCT00004987001 | |
| 29382 chr1 manual_curation exon 37732061 37732215 . - . Parent=GSCOCT00004987001 | |
| 29383 chr1 manual_curation exon 37731047 37731286 . - . Parent=GSCOCT00004987001 | |
| 29384 chr1 manual_curation exon 37730716 37730825 . - . Parent=GSCOCT00004987001 | |
| 29385 chr1 manual_curation exon 37730520 37730597 . - . Parent=GSCOCT00004987001 | |
| 29386 chr1 manual_curation exon 37730317 37730423 . - . Parent=GSCOCT00004987001 | |
| 29387 chr1 manual_curation exon 37729085 37729179 . - . Parent=GSCOCT00004987001 | |
| 29388 chr1 manual_curation exon 37728865 37728998 . - . Parent=GSCOCT00004987001 | |
| 29389 chr1 manual_curation exon 37728014 37728117 . - . Parent=GSCOCT00004987001 | |
| 29390 chr1 manual_curation exon 37727834 37727911 . - . Parent=GSCOCT00004987001 | |
| 29391 chr1 manual_curation exon 37727632 37727710 . - . Parent=GSCOCT00004987001 | |
| 29392 chr1 manual_curation exon 37725842 37726010 . - . Parent=GSCOCT00004987001 | |
| 29393 chr1 manual_curation exon 37723952 37724022 . - . Parent=GSCOCT00004987001 | |
| 29394 chr1 manual_curation exon 37723543 37723623 . - . Parent=GSCOCT00004987001 | |
| 29395 chr1 manual_curation exon 37723357 37723427 . - . Parent=GSCOCT00004987001 | |
| 29396 chr1 manual_curation exon 37722944 37723040 . - . Parent=GSCOCT00004987001 | |
| 29397 chr1 manual_curation exon 37722793 37722852 . - . Parent=GSCOCT00004987001 | |
| 29398 chr1 manual_curation exon 37722622 37722676 . - . Parent=GSCOCT00004987001 | |
| 29399 chr1 manual_curation exon 37722136 37722533 . - . Parent=GSCOCT00004987001 | |
| 29400 chr1 manual_curation exon 37721439 37722062 . - . Parent=GSCOCT00004987001 | |
| 29401 chr1 manual_curation exon 37720584 37721294 . - . Parent=GSCOCT00004987001 | |
| 29402 chr1 manual_curation exon 37719873 37720445 . - . Parent=GSCOCT00004987001 | |
| 29403 chr1 manual_curation exon 37719643 37719701 . - . Parent=GSCOCT00004987001 | |
| 29404 chr1 manual_curation exon 37718372 37718985 . - . Parent=GSCOCT00004987001 | |
| 29405 chr1 manual_curation CDS 37733426 37733458 . - 0 Parent=GSCOCT00004987001 | |
| 29406 chr1 manual_curation CDS 37732728 37733071 . - 0 Parent=GSCOCT00004987001 | |
| 29407 chr1 manual_curation CDS 37732061 37732215 . - 2 Parent=GSCOCT00004987001 | |
| 29408 chr1 manual_curation CDS 37731047 37731286 . - 1 Parent=GSCOCT00004987001 | |
| 29409 chr1 manual_curation CDS 37730716 37730825 . - 1 Parent=GSCOCT00004987001 | |
| 29410 chr1 manual_curation CDS 37730520 37730597 . - 0 Parent=GSCOCT00004987001 | |
| 29411 chr1 manual_curation CDS 37730317 37730423 . - 0 Parent=GSCOCT00004987001 | |
| 29412 chr1 manual_curation CDS 37729085 37729179 . - 2 Parent=GSCOCT00004987001 | |
| 29413 chr1 manual_curation CDS 37728865 37728998 . - 1 Parent=GSCOCT00004987001 | |
| 29414 chr1 manual_curation CDS 37728014 37728117 . - 0 Parent=GSCOCT00004987001 | |
| 29415 chr1 manual_curation CDS 37727834 37727911 . - 2 Parent=GSCOCT00004987001 | |
| 29416 chr1 manual_curation CDS 37727632 37727710 . - 2 Parent=GSCOCT00004987001 | |
| 29417 chr1 manual_curation CDS 37725842 37726010 . - 0 Parent=GSCOCT00004987001 | |
| 29418 chr1 manual_curation CDS 37723952 37724022 . - 1 Parent=GSCOCT00004987001 | |
| 29419 chr1 manual_curation CDS 37723543 37723623 . - 0 Parent=GSCOCT00004987001 | |
| 29420 chr1 manual_curation CDS 37723357 37723427 . - 0 Parent=GSCOCT00004987001 | |
| 29421 chr1 manual_curation CDS 37722944 37723040 . - 2 Parent=GSCOCT00004987001 | |
| 29422 chr1 manual_curation CDS 37722793 37722852 . - 0 Parent=GSCOCT00004987001 | |
| 29423 chr1 manual_curation CDS 37722622 37722676 . - 0 Parent=GSCOCT00004987001 | |
| 29424 chr1 manual_curation CDS 37722136 37722533 . - 1 Parent=GSCOCT00004987001 | |
| 29425 chr1 manual_curation CDS 37721439 37722062 . - 0 Parent=GSCOCT00004987001 | |
| 29426 chr1 manual_curation CDS 37720584 37721294 . - 0 Parent=GSCOCT00004987001 | |
| 29427 chr1 manual_curation CDS 37719873 37720445 . - 0 Parent=GSCOCT00004987001 | |
| 29428 chr1 manual_curation CDS 37719643 37719701 . - 0 Parent=GSCOCT00004987001 | |
| 29429 chr1 manual_curation CDS 37718790 37718985 . - 2 Parent=GSCOCT00004987001 | |
| 29430 chr1 manual_curation gene 37740209 37745491 . - . ID=GSCOCG00004986001;Name=Cc01_g21380 | |
| 29431 chr1 manual_curation mRNA 37740209 37745491 . - . ID=GSCOCT00004986001;Parent=GSCOCG00004986001;Name=Cc01_g21380 | |
| 29432 chr1 manual_curation polypeptide 37740487 37745491 . - . ID=GSCOCP00004986001;Dbxref=GENE3D:G3DSA:2.40.50.140,InterPro:IPR001208,InterPro:IPR008050,InterPro:IPR012340,InterPro:IPR016027,InterPro:IPR018525,PANTHER:PTHR11630:SF26,PFAM:PF00493,PRINTS:PR01657,PRINTS:PR01663,PROFILE:PS50051,PROSITE:PS00847,SMART:SM00350,SUPERFAMILY:SSF50249,SwissProt:O75001,SwissProt:P38132,SwissProt:P43299,TAIR:AT2G16440.1,TAIR:AT4G02060.1,TAIR:AT5G44635.1,TrEMBL:B9I9J1,TrEMBL:B9RNE8,TrEMBL:I1JQR6;Derives_from=GSCOCT00004986001;Name=Cc01_g21380;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0005524,GO:0005634,GO:0006260,GO:0006270,CC_EC_number:missing_EC_number,PRODUCT:Protein PROLIFERA,CC_functional_completeness:complete,CC_gene:PRL,CC_gene:mcm7,CC_gene:MCM7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004986001~ Protein PROLIFERA~ PRL~ complete;original_location=join(447910..447940%2C448055..448122%2C448278..448337%2C448435..448658%2C448893..449070%2C449345..449467%2C449549..449638%2C450124..450266%2C450368..450545%2C450813..451004%2C451253..451425%2C451574..451777%2C451933..452098%2C452409..452630%2C452810..452914);owner=coffea | |
| 29433 chr1 manual_curation exon 37745461 37745491 . - . Parent=GSCOCT00004986001 | |
| 29434 chr1 manual_curation exon 37745279 37745346 . - . Parent=GSCOCT00004986001 | |
| 29435 chr1 manual_curation exon 37745064 37745123 . - . Parent=GSCOCT00004986001 | |
| 29436 chr1 manual_curation exon 37744743 37744966 . - . Parent=GSCOCT00004986001 | |
| 29437 chr1 manual_curation exon 37744331 37744508 . - . Parent=GSCOCT00004986001 | |
| 29438 chr1 manual_curation exon 37743934 37744056 . - . Parent=GSCOCT00004986001 | |
| 29439 chr1 manual_curation exon 37743763 37743852 . - . Parent=GSCOCT00004986001 | |
| 29440 chr1 manual_curation exon 37743135 37743277 . - . Parent=GSCOCT00004986001 | |
| 29441 chr1 manual_curation exon 37742856 37743033 . - . Parent=GSCOCT00004986001 | |
| 29442 chr1 manual_curation exon 37742397 37742588 . - . Parent=GSCOCT00004986001 | |
| 29443 chr1 manual_curation exon 37741976 37742148 . - . Parent=GSCOCT00004986001 | |
| 29444 chr1 manual_curation exon 37741624 37741827 . - . Parent=GSCOCT00004986001 | |
| 29445 chr1 manual_curation exon 37741303 37741468 . - . Parent=GSCOCT00004986001 | |
| 29446 chr1 manual_curation exon 37740771 37740992 . - . Parent=GSCOCT00004986001 | |
| 29447 chr1 manual_curation exon 37740209 37740591 . - . Parent=GSCOCT00004986001 | |
| 29448 chr1 manual_curation CDS 37745461 37745491 . - 0 Parent=GSCOCT00004986001 | |
| 29449 chr1 manual_curation CDS 37745279 37745346 . - 1 Parent=GSCOCT00004986001 | |
| 29450 chr1 manual_curation CDS 37745064 37745123 . - 0 Parent=GSCOCT00004986001 | |
| 29451 chr1 manual_curation CDS 37744743 37744966 . - 0 Parent=GSCOCT00004986001 | |
| 29452 chr1 manual_curation CDS 37744331 37744508 . - 2 Parent=GSCOCT00004986001 | |
| 29453 chr1 manual_curation CDS 37743934 37744056 . - 0 Parent=GSCOCT00004986001 | |
| 29454 chr1 manual_curation CDS 37743763 37743852 . - 0 Parent=GSCOCT00004986001 | |
| 29455 chr1 manual_curation CDS 37743135 37743277 . - 0 Parent=GSCOCT00004986001 | |
| 29456 chr1 manual_curation CDS 37742856 37743033 . - 2 Parent=GSCOCT00004986001 | |
| 29457 chr1 manual_curation CDS 37742397 37742588 . - 0 Parent=GSCOCT00004986001 | |
| 29458 chr1 manual_curation CDS 37741976 37742148 . - 0 Parent=GSCOCT00004986001 | |
| 29459 chr1 manual_curation CDS 37741624 37741827 . - 2 Parent=GSCOCT00004986001 | |
| 29460 chr1 manual_curation CDS 37741303 37741468 . - 2 Parent=GSCOCT00004986001 | |
| 29461 chr1 manual_curation CDS 37740771 37740992 . - 0 Parent=GSCOCT00004986001 | |
| 29462 chr1 manual_curation CDS 37740487 37740591 . - 0 Parent=GSCOCT00004986001 | |
| 29463 chr1 manual_curation gene 37746321 37756823 . - . ID=GSCOCG00004985001;Name=Cc01_g21390 | |
| 29464 chr1 manual_curation mRNA 37746321 37756823 . - . ID=GSCOCT00004985001;Parent=GSCOCG00004985001;Name=Cc01_g21390 | |
| 29465 chr1 manual_curation polypeptide 37747003 37756659 . - . ID=GSCOCP00004985001;Dbxref=InterPro:IPR014812,PFAM:PF08700,SwissProt:Q155U0,SwissProt:Q54KG3,SwissProt:Q5ZJ25,TAIR:AT4G02030.2,TrEMBL:B9RNE7,TrEMBL:D7U2I2,TrEMBL:I1L7Q0;Derives_from=GSCOCT00004985001;Name=Cc01_g21390;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein fat-free homolog,CC_functional_completeness:complete,CC_gene:ffr,CC_gene:FFR;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004985001~ Putative Protein fat-free homolog~ ffr~ complete;original_location=join(436742..436924%2C437867..438006%2C438175..438229%2C438313..438420%2C438678..438776%2C438903..438980%2C439701..439778%2C440632..440787%2C441150..441250%2C441361..441428%2C442169..442242%2C442344..442410%2C442893..443011%2C444004..444270%2C444385..444501%2C445191..445262%2C445358..445408%2C445693..445923%2C446003..446179%2C446282..446398);owner=coffea | |
| 29466 chr1 manual_curation exon 37756477 37756823 . - . Parent=GSCOCT00004985001 | |
| 29467 chr1 manual_curation exon 37755395 37755534 . - . Parent=GSCOCT00004985001 | |
| 29468 chr1 manual_curation exon 37755172 37755226 . - . Parent=GSCOCT00004985001 | |
| 29469 chr1 manual_curation exon 37754981 37755088 . - . Parent=GSCOCT00004985001 | |
| 29470 chr1 manual_curation exon 37754625 37754723 . - . Parent=GSCOCT00004985001 | |
| 29471 chr1 manual_curation exon 37754421 37754498 . - . Parent=GSCOCT00004985001 | |
| 29472 chr1 manual_curation exon 37753623 37753700 . - . Parent=GSCOCT00004985001 | |
| 29473 chr1 manual_curation exon 37752614 37752769 . - . Parent=GSCOCT00004985001 | |
| 29474 chr1 manual_curation exon 37752151 37752251 . - . Parent=GSCOCT00004985001 | |
| 29475 chr1 manual_curation exon 37751973 37752040 . - . Parent=GSCOCT00004985001 | |
| 29476 chr1 manual_curation exon 37751159 37751232 . - . Parent=GSCOCT00004985001 | |
| 29477 chr1 manual_curation exon 37750991 37751057 . - . Parent=GSCOCT00004985001 | |
| 29478 chr1 manual_curation exon 37750390 37750508 . - . Parent=GSCOCT00004985001 | |
| 29479 chr1 manual_curation exon 37749131 37749397 . - . Parent=GSCOCT00004985001 | |
| 29480 chr1 manual_curation exon 37748900 37749016 . - . Parent=GSCOCT00004985001 | |
| 29481 chr1 manual_curation exon 37748139 37748210 . - . Parent=GSCOCT00004985001 | |
| 29482 chr1 manual_curation exon 37747993 37748043 . - . Parent=GSCOCT00004985001 | |
| 29483 chr1 manual_curation exon 37747478 37747708 . - . Parent=GSCOCT00004985001 | |
| 29484 chr1 manual_curation exon 37747222 37747398 . - . Parent=GSCOCT00004985001 | |
| 29485 chr1 manual_curation exon 37746321 37747119 . - . Parent=GSCOCT00004985001 | |
| 29486 chr1 manual_curation CDS 37756477 37756659 . - 0 Parent=GSCOCT00004985001 | |
| 29487 chr1 manual_curation CDS 37755395 37755534 . - 0 Parent=GSCOCT00004985001 | |
| 29488 chr1 manual_curation CDS 37755172 37755226 . - 2 Parent=GSCOCT00004985001 | |
| 29489 chr1 manual_curation CDS 37754981 37755088 . - 0 Parent=GSCOCT00004985001 | |
| 29490 chr1 manual_curation CDS 37754625 37754723 . - 0 Parent=GSCOCT00004985001 | |
| 29491 chr1 manual_curation CDS 37754421 37754498 . - 0 Parent=GSCOCT00004985001 | |
| 29492 chr1 manual_curation CDS 37753623 37753700 . - 0 Parent=GSCOCT00004985001 | |
| 29493 chr1 manual_curation CDS 37752614 37752769 . - 0 Parent=GSCOCT00004985001 | |
| 29494 chr1 manual_curation CDS 37752151 37752251 . - 0 Parent=GSCOCT00004985001 | |
| 29495 chr1 manual_curation CDS 37751973 37752040 . - 2 Parent=GSCOCT00004985001 | |
| 29496 chr1 manual_curation CDS 37751159 37751232 . - 1 Parent=GSCOCT00004985001 | |
| 29497 chr1 manual_curation CDS 37750991 37751057 . - 0 Parent=GSCOCT00004985001 | |
| 29498 chr1 manual_curation CDS 37750390 37750508 . - 1 Parent=GSCOCT00004985001 | |
| 29499 chr1 manual_curation CDS 37749131 37749397 . - 0 Parent=GSCOCT00004985001 | |
| 29500 chr1 manual_curation CDS 37748900 37749016 . - 0 Parent=GSCOCT00004985001 | |
| 29501 chr1 manual_curation CDS 37748139 37748210 . - 0 Parent=GSCOCT00004985001 | |
| 29502 chr1 manual_curation CDS 37747993 37748043 . - 0 Parent=GSCOCT00004985001 | |
| 29503 chr1 manual_curation CDS 37747478 37747708 . - 0 Parent=GSCOCT00004985001 | |
| 29504 chr1 manual_curation CDS 37747222 37747398 . - 0 Parent=GSCOCT00004985001 | |
| 29505 chr1 manual_curation CDS 37747003 37747119 . - 0 Parent=GSCOCT00004985001 | |
| 29506 chr1 manual_curation gene 37761161 37761603 . + . ID=GSCOCG00004984001;Name=Cc01_g21400 | |
| 29507 chr1 manual_curation mRNA 37761161 37761603 . + . ID=GSCOCT00004984001;Parent=GSCOCG00004984001;Name=Cc01_g21400 | |
| 29508 chr1 manual_curation polypeptide 37761161 37761603 . + . ID=GSCOCP00004984001;Derives_from=GSCOCT00004984001;Name=Cc01_g21400;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004984001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(432166..432240%2C431798..431866));owner=coffea | |
| 29509 chr1 manual_curation exon 37761535 37761603 . + . Parent=GSCOCT00004984001 | |
| 29510 chr1 manual_curation exon 37761161 37761235 . + . Parent=GSCOCT00004984001 | |
| 29511 chr1 manual_curation CDS 37761535 37761603 . + 0 Parent=GSCOCT00004984001 | |
| 29512 chr1 manual_curation CDS 37761161 37761235 . + 0 Parent=GSCOCT00004984001 | |
| 29513 chr1 manual_curation gene 37761676 37761762 . + . ID=GSCOCG00004983001;Name=Cc01_g21410 | |
| 29514 chr1 manual_curation mRNA 37761676 37761762 . + . ID=GSCOCT00004983001;Parent=GSCOCG00004983001;Name=Cc01_g21410 | |
| 29515 chr1 manual_curation polypeptide 37761676 37761762 . + . ID=GSCOCP00004983001;Derives_from=GSCOCT00004983001;Name=Cc01_g21410;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004983001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(431639..431725);owner=coffea | |
| 29516 chr1 manual_curation exon 37761676 37761762 . + . Parent=GSCOCT00004983001 | |
| 29517 chr1 manual_curation CDS 37761676 37761762 . + 0 Parent=GSCOCT00004983001 | |
| 29518 chr1 manual_curation gene 37761897 37762596 . + . ID=GSCOCG00004982001;Name=Cc01_g21420 | |
| 29519 chr1 manual_curation mRNA 37761897 37762596 . + . ID=GSCOCT00004982001;Parent=GSCOCG00004982001;Name=Cc01_g21420 | |
| 29520 chr1 manual_curation polypeptide 37761897 37762442 . + . ID=GSCOCP00004982001;Dbxref=InterPro:IPR004827,InterPro:IPR011616,PFAM:PF00170,PROFILE:PS50217,PROSITE:PS00036,SMART:SM00338,SwissProt:P24068,TAIR:AT1G75390.1,TAIR:AT3G62420.1,TAIR:AT4G34590.1,TrEMBL:O22676,TrEMBL:O22677,TrEMBL:Q9LEB7;Derives_from=GSCOCT00004982001;Name=Cc01_g21420;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0043565,GO:0046983,CC_EC_number:missing_EC_number,PRODUCT:Putative Ocs element-binding factor 1,CC_functional_completeness:modules,CC_gene:OBF1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004982001~ Putative Ocs element-binding factor 1~ OBF1~ modules;original_location=complement(430959..431504);owner=coffea | |
| 29521 chr1 manual_curation exon 37761897 37762596 . + . Parent=GSCOCT00004982001 | |
| 29522 chr1 manual_curation CDS 37761897 37762442 . + 0 Parent=GSCOCT00004982001 | |
| 29523 chr1 manual_curation gene 37762725 37763783 . - . ID=GSCOCG00004981001;Name=Cc01_g21430 | |
| 29524 chr1 manual_curation mRNA 37762725 37763783 . - . ID=GSCOCT00004981001;Parent=GSCOCG00004981001;Name=Cc01_g21430 | |
| 29525 chr1 manual_curation polypeptide 37763310 37763693 . - . ID=GSCOCP00004981001;Dbxref=InterPro:IPR003823,PFAM:PF02672,SwissProt:A6Q0K5,SwissProt:O22914,SwissProt:Q9LZP9,TAIR:AT1G76560.1,TAIR:AT2G47400.1,TAIR:AT3G62410.1,TrEMBL:B7XB92,TrEMBL:F6HPR1,TrEMBL:O24292;Derives_from=GSCOCT00004981001;Name=Cc01_g21430;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Calvin cycle protein CP12-2%2C chloroplastic,CC_functional_completeness:complete,CC_gene:CP12-2,CC_gene:CP12-1,CC_gene:CP12;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004981001~ Calvin cycle protein CP12-2%2C chloroplastic~ CP12-2~ complete;original_location=429708..430091;owner=coffea | |
| 29526 chr1 manual_curation exon 37762725 37763783 . - . Parent=GSCOCT00004981001 | |
| 29527 chr1 manual_curation CDS 37763310 37763693 . - 0 Parent=GSCOCT00004981001 | |
| 29528 chr1 manual_curation gene 37764696 37772232 . + . ID=GSCOCG00004980001;Name=Cc01_g21440 | |
| 29529 chr1 manual_curation mRNA 37764696 37772232 . + . ID=GSCOCT00004980001;Parent=GSCOCG00004980001;Name=Cc01_g21440 | |
| 29530 chr1 manual_curation polypeptide 37765008 37771310 . + . ID=GSCOCP00004980001;Dbxref=InterPro:IPR001375,InterPro:IPR004106,PFAM:PF00326,SUPERFAMILY:SSF50993,SwissProt:Q10MJ1,SwissProt:Q8VZF3,TAIR:AT2G47390.1,TrEMBL:B9I9I8,TrEMBL:D7U2I4,TrEMBL:G7KST7;Derives_from=GSCOCT00004980001;Name=Cc01_g21440;Ontology_term=CC_evidence_code:ISS,GO:0004252,GO:0006508,GO:0008236,CC_EC_number:3.4.19.1,PRODUCT:Probable glutamyl endopeptidase%2C chloroplastic,CC_functional_completeness:complete,CC_gene:GEP;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004980001~ Probable glutamyl endopeptidase%2C chloroplastic~ GEP~ complete;original_location=complement(join(428288..428393%2C427766..427976%2C427465..427575%2C426698..426743%2C426229..426338%2C425641..426144%2C425190..425318%2C424607..424909%2C424044..424529%2C423874..423939%2C423327..423387%2C423096..423245%2C422717..422854%2C422188..422486%2C422091..422121));owner=coffea | |
| 29531 chr1 manual_curation exon 37771280 37772232 . + . Parent=GSCOCT00004980001 | |
| 29532 chr1 manual_curation exon 37770915 37771213 . + . Parent=GSCOCT00004980001 | |
| 29533 chr1 manual_curation exon 37770547 37770684 . + . Parent=GSCOCT00004980001 | |
| 29534 chr1 manual_curation exon 37770156 37770305 . + . Parent=GSCOCT00004980001 | |
| 29535 chr1 manual_curation exon 37770014 37770074 . + . Parent=GSCOCT00004980001 | |
| 29536 chr1 manual_curation exon 37769462 37769527 . + . Parent=GSCOCT00004980001 | |
| 29537 chr1 manual_curation exon 37768872 37769357 . + . Parent=GSCOCT00004980001 | |
| 29538 chr1 manual_curation exon 37768492 37768794 . + . Parent=GSCOCT00004980001 | |
| 29539 chr1 manual_curation exon 37768083 37768211 . + . Parent=GSCOCT00004980001 | |
| 29540 chr1 manual_curation exon 37767257 37767760 . + . Parent=GSCOCT00004980001 | |
| 29541 chr1 manual_curation exon 37767063 37767172 . + . Parent=GSCOCT00004980001 | |
| 29542 chr1 manual_curation exon 37766658 37766703 . + . Parent=GSCOCT00004980001 | |
| 29543 chr1 manual_curation exon 37765826 37765936 . + . Parent=GSCOCT00004980001 | |
| 29544 chr1 manual_curation exon 37765425 37765635 . + . Parent=GSCOCT00004980001 | |
| 29545 chr1 manual_curation exon 37764696 37765113 . + . Parent=GSCOCT00004980001 | |
| 29546 chr1 manual_curation CDS 37771280 37771310 . + 2 Parent=GSCOCT00004980001 | |
| 29547 chr1 manual_curation CDS 37770915 37771213 . + 0 Parent=GSCOCT00004980001 | |
| 29548 chr1 manual_curation CDS 37770547 37770684 . + 0 Parent=GSCOCT00004980001 | |
| 29549 chr1 manual_curation CDS 37770156 37770305 . + 0 Parent=GSCOCT00004980001 | |
| 29550 chr1 manual_curation CDS 37770014 37770074 . + 2 Parent=GSCOCT00004980001 | |
| 29551 chr1 manual_curation CDS 37769462 37769527 . + 2 Parent=GSCOCT00004980001 | |
| 29552 chr1 manual_curation CDS 37768872 37769357 . + 2 Parent=GSCOCT00004980001 | |
| 29553 chr1 manual_curation CDS 37768492 37768794 . + 2 Parent=GSCOCT00004980001 | |
| 29554 chr1 manual_curation CDS 37768083 37768211 . + 2 Parent=GSCOCT00004980001 | |
| 29555 chr1 manual_curation CDS 37767257 37767760 . + 2 Parent=GSCOCT00004980001 | |
| 29556 chr1 manual_curation CDS 37767063 37767172 . + 0 Parent=GSCOCT00004980001 | |
| 29557 chr1 manual_curation CDS 37766658 37766703 . + 2 Parent=GSCOCT00004980001 | |
| 29558 chr1 manual_curation CDS 37765826 37765936 . + 2 Parent=GSCOCT00004980001 | |
| 29559 chr1 manual_curation CDS 37765425 37765635 . + 1 Parent=GSCOCT00004980001 | |
| 29560 chr1 manual_curation CDS 37765008 37765113 . + 0 Parent=GSCOCT00004980001 | |
| 29561 chr1 manual_curation gene 37772764 37774964 . - . ID=GSCOCG00004979001;Name=Cc01_g21450 | |
| 29562 chr1 manual_curation mRNA 37772764 37774964 . - . ID=GSCOCT00004979001;Parent=GSCOCG00004979001;Name=Cc01_g21450 | |
| 29563 chr1 manual_curation polypeptide 37773090 37773281 . - . ID=GSCOCP00004979001;Dbxref=InterPro:IPR008432,PFAM:PF05799,PRODOM:PD019231,SwissProt:Q8VY39,SwissProt:Q9FLK2,SwissProt:Q9LZQ0,TAIR:AT2G47380.1,TAIR:AT5G40382.1,TAIR:AT5G61310.1,TrEMBL:B9RNE3,TrEMBL:D7LT63,TrEMBL:I1JBG2;Derives_from=GSCOCT00004979001;Name=Cc01_g21450;Ontology_term=CC_evidence_code:ISS,GO:0004129,GO:0005746,GO:0055114,CC_EC_number:missing_EC_number,PRODUCT:Cytochrome c oxidase subunit 5C-2,CC_functional_completeness:complete,CC_gene:At3g62400,CC_gene:At5g61310,CC_gene:COX5C2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004979001~ Cytochrome c oxidase subunit 5C-2~ At3g62400~ complete;original_location=420120..420311;owner=coffea | |
| 29564 chr1 manual_curation exon 37772764 37774964 . - . Parent=GSCOCT00004979001 | |
| 29565 chr1 manual_curation CDS 37773090 37773281 . - 0 Parent=GSCOCT00004979001 | |
| 29566 chr1 manual_curation gene 37781215 37785251 . + . ID=GSCOCG00004978001;Name=Cc01_g21460 | |
| 29567 chr1 manual_curation mRNA 37781215 37785251 . + . ID=GSCOCT00004978001;Parent=GSCOCG00004978001;Name=Cc01_g21460 | |
| 29568 chr1 manual_curation polypeptide 37781459 37785251 . + . ID=GSCOCP00004978001;Dbxref=TAIR:AT2G16760.1,TAIR:AT2G47370.1,TAIR:AT5G28660.1,TrEMBL:B9RNE2,TrEMBL:D7U2I5,TrEMBL:I1JBG1;Derives_from=GSCOCT00004978001;Name=Cc01_g21460;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Calcium-dependent phosphotriesterase superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004978001~ Calcium-dependent phosphotriesterase superfamily protein~ unknown_gene~ complete;original_location=complement(join(411495..411942%2C408150..408709));owner=coffea | |
| 29569 chr1 manual_curation exon 37784692 37785251 . + . Parent=GSCOCT00004978001 | |
| 29570 chr1 manual_curation exon 37781215 37781906 . + . Parent=GSCOCT00004978001 | |
| 29571 chr1 manual_curation CDS 37784692 37785251 . + 1 Parent=GSCOCT00004978001 | |
| 29572 chr1 manual_curation CDS 37781459 37781906 . + 0 Parent=GSCOCT00004978001 | |
| 29573 chr1 manual_curation gene 37786262 37788785 . + . ID=GSCOCG00004976001;Name=Cc01_g21470 | |
| 29574 chr1 manual_curation mRNA 37786262 37788785 . + . ID=GSCOCT00004976001;Parent=GSCOCG00004976001;Name=Cc01_g21470 | |
| 29575 chr1 manual_curation polypeptide 37786262 37788540 . + . ID=GSCOCP00004976001;Dbxref=InterPro:IPR004253,PFAM:PF03005,TAIR:AT3G12060.1,TAIR:AT3G62390.1,TAIR:AT5G06700.1,TrEMBL:B9GST0,TrEMBL:B9RNE1,TrEMBL:F6HZA0;Derives_from=GSCOCT00004976001;Name=Cc01_g21470;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004976001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=complement(join(406337..407139%2C405897..406089%2C405597..405787%2C405279..405437%2C404861..405185));owner=coffea | |
| 29576 chr1 manual_curation exon 37788216 37788785 . + . Parent=GSCOCT00004976001 | |
| 29577 chr1 manual_curation exon 37787964 37788122 . + . Parent=GSCOCT00004976001 | |
| 29578 chr1 manual_curation exon 37787614 37787804 . + . Parent=GSCOCT00004976001 | |
| 29579 chr1 manual_curation exon 37787312 37787504 . + . Parent=GSCOCT00004976001 | |
| 29580 chr1 manual_curation exon 37786262 37787064 . + . Parent=GSCOCT00004976001 | |
| 29581 chr1 manual_curation CDS 37788216 37788540 . + 2 Parent=GSCOCT00004976001 | |
| 29582 chr1 manual_curation CDS 37787964 37788122 . + 2 Parent=GSCOCT00004976001 | |
| 29583 chr1 manual_curation CDS 37787614 37787804 . + 0 Parent=GSCOCT00004976001 | |
| 29584 chr1 manual_curation CDS 37787312 37787504 . + 2 Parent=GSCOCT00004976001 | |
| 29585 chr1 manual_curation CDS 37786262 37787064 . + 0 Parent=GSCOCT00004976001 | |
| 29586 chr1 manual_curation gene 37788913 37799147 . - . ID=GSCOCG00004975001;Name=Cc01_g21480 | |
| 29587 chr1 manual_curation mRNA 37788913 37799147 . - . ID=GSCOCT00004975001;Parent=GSCOCG00004975001;Name=Cc01_g21480 | |
| 29588 chr1 manual_curation polypeptide 37789279 37798722 . - . ID=GSCOCP00004975001;Dbxref=InterPro:IPR001214,PFAM:PF00856,PROFILE:PS50280,SMART:SM00317,SwissProt:Q8S4P4,SwissProt:Q8S4P5,SwissProt:Q9ZSM8,TAIR:AT1G02580.1,TAIR:AT2G23380.1,TAIR:AT4G02020.1,TrEMBL:A7X9Y1,TrEMBL:F6HZA1,TrEMBL:Q76I94;Derives_from=GSCOCT00004975001;Name=Cc01_g21480;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.1.1.43,PRODUCT:Histone-lysine N-methyltransferase EZA1,CC_functional_completeness:complete,CC_gene:EZA1,CC_gene:EZ3,CC_gene:EZ2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004975001~ Histone-lysine N-methyltransferase EZA1~ EZA1~ complete;original_location=join(394679..394720%2C395837..395944%2C396143..396417%2C397082..397243%2C398484..398568%2C398714..398869%2C398947..398994%2C399069..399140%2C399598..399715%2C399832..400261%2C400802..400958%2C401754..401974%2C402346..402477%2C402994..403081%2C403182..403229%2C403309..403463%2C403544..403580%2C403788..403865%2C403931..404122);owner=coffea | |
| 29589 chr1 manual_curation exon 37798681 37799147 . - . Parent=GSCOCT00004975001 | |
| 29590 chr1 manual_curation exon 37797457 37797564 . - . Parent=GSCOCT00004975001 | |
| 29591 chr1 manual_curation exon 37796984 37797258 . - . Parent=GSCOCT00004975001 | |
| 29592 chr1 manual_curation exon 37796158 37796319 . - . Parent=GSCOCT00004975001 | |
| 29593 chr1 manual_curation exon 37794833 37794917 . - . Parent=GSCOCT00004975001 | |
| 29594 chr1 manual_curation exon 37794532 37794687 . - . Parent=GSCOCT00004975001 | |
| 29595 chr1 manual_curation exon 37794407 37794454 . - . Parent=GSCOCT00004975001 | |
| 29596 chr1 manual_curation exon 37794261 37794332 . - . Parent=GSCOCT00004975001 | |
| 29597 chr1 manual_curation exon 37793686 37793803 . - . Parent=GSCOCT00004975001 | |
| 29598 chr1 manual_curation exon 37793140 37793569 . - . Parent=GSCOCT00004975001 | |
| 29599 chr1 manual_curation exon 37792443 37792599 . - . Parent=GSCOCT00004975001 | |
| 29600 chr1 manual_curation exon 37791427 37791647 . - . Parent=GSCOCT00004975001 | |
| 29601 chr1 manual_curation exon 37790924 37791055 . - . Parent=GSCOCT00004975001 | |
| 29602 chr1 manual_curation exon 37790320 37790407 . - . Parent=GSCOCT00004975001 | |
| 29603 chr1 manual_curation exon 37790172 37790219 . - . Parent=GSCOCT00004975001 | |
| 29604 chr1 manual_curation exon 37789938 37790092 . - . Parent=GSCOCT00004975001 | |
| 29605 chr1 manual_curation exon 37789821 37789857 . - . Parent=GSCOCT00004975001 | |
| 29606 chr1 manual_curation exon 37789536 37789613 . - . Parent=GSCOCT00004975001 | |
| 29607 chr1 manual_curation exon 37788913 37789470 . - . Parent=GSCOCT00004975001 | |
| 29608 chr1 manual_curation CDS 37798681 37798722 . - 0 Parent=GSCOCT00004975001 | |
| 29609 chr1 manual_curation CDS 37797457 37797564 . - 0 Parent=GSCOCT00004975001 | |
| 29610 chr1 manual_curation CDS 37796984 37797258 . - 0 Parent=GSCOCT00004975001 | |
| 29611 chr1 manual_curation CDS 37796158 37796319 . - 2 Parent=GSCOCT00004975001 | |
| 29612 chr1 manual_curation CDS 37794833 37794917 . - 2 Parent=GSCOCT00004975001 | |
| 29613 chr1 manual_curation CDS 37794532 37794687 . - 0 Parent=GSCOCT00004975001 | |
| 29614 chr1 manual_curation CDS 37794407 37794454 . - 0 Parent=GSCOCT00004975001 | |
| 29615 chr1 manual_curation CDS 37794261 37794332 . - 0 Parent=GSCOCT00004975001 | |
| 29616 chr1 manual_curation CDS 37793686 37793803 . - 0 Parent=GSCOCT00004975001 | |
| 29617 chr1 manual_curation CDS 37793140 37793569 . - 1 Parent=GSCOCT00004975001 | |
| 29618 chr1 manual_curation CDS 37792443 37792599 . - 2 Parent=GSCOCT00004975001 | |
| 29619 chr1 manual_curation CDS 37791427 37791647 . - 0 Parent=GSCOCT00004975001 | |
| 29620 chr1 manual_curation CDS 37790924 37791055 . - 2 Parent=GSCOCT00004975001 | |
| 29621 chr1 manual_curation CDS 37790320 37790407 . - 2 Parent=GSCOCT00004975001 | |
| 29622 chr1 manual_curation CDS 37790172 37790219 . - 0 Parent=GSCOCT00004975001 | |
| 29623 chr1 manual_curation CDS 37789938 37790092 . - 0 Parent=GSCOCT00004975001 | |
| 29624 chr1 manual_curation CDS 37789821 37789857 . - 2 Parent=GSCOCT00004975001 | |
| 29625 chr1 manual_curation CDS 37789536 37789613 . - 0 Parent=GSCOCT00004975001 | |
| 29626 chr1 manual_curation CDS 37789279 37789470 . - 0 Parent=GSCOCT00004975001 | |
| 29627 chr1 manual_curation gene 37815139 37816182 . - . ID=GSCOCG00004974001;Name=Cc01_g21490 | |
| 29628 chr1 manual_curation mRNA 37815139 37816182 . - . ID=GSCOCT00004974001;Parent=GSCOCG00004974001;Name=Cc01_g21490 | |
| 29629 chr1 manual_curation polypeptide 37815139 37816182 . - . ID=GSCOCP00004974001;Dbxref=TAIR:AT1G02570.1,TAIR:AT1G02575.1,TAIR:AT2G47360.1,TrEMBL:B9I9I3,TrEMBL:B9RND8,TrEMBL:F6HZA3;Derives_from=GSCOCT00004974001;Name=Cc01_g21490;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004974001~ Putative unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02570.1)%3B Has 58 Blast hits to 55 proteins in 6 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 58%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=377219..378262;owner=coffea | |
| 29630 chr1 manual_curation exon 37815139 37816182 . - . Parent=GSCOCT00004974001 | |
| 29631 chr1 manual_curation CDS 37815139 37816182 . - 0 Parent=GSCOCT00004974001 | |
| 29632 chr1 manual_curation gene 37816916 37821989 . - . ID=GSCOCG00004973001;Name=Cc01_g21500 | |
| 29633 chr1 manual_curation mRNA 37816916 37821989 . - . ID=GSCOCT00004973001;Parent=GSCOCG00004973001;Name=Cc01_g21500 | |
| 29634 chr1 manual_curation polypeptide 37818033 37821791 . - . ID=GSCOCP00004973001;Dbxref=InterPro:IPR001907,InterPro:IPR018215,PANTHER:PTHR10381,PFAM:PF00574,PRINTS:PR00127,PROSITE:PS00381,PROSITE:PS00382,SwissProt:Q3MFR5,SwissProt:Q8YXH5,SwissProt:Q9S834,TAIR:AT1G02560.1,TAIR:AT1G66670.1,TAIR:AT5G45390.1,TrEMBL:B8K1W3,TrEMBL:B9GST6,TrEMBL:D7KB96;Derives_from=GSCOCT00004973001;Name=Cc01_g21500;Ontology_term=CC_evidence_code:ISS,GO:0004252,GO:0006508,CC_EC_number:3.4.21.92,PRODUCT:ATP-dependent Clp protease proteolytic subunit 5%2C chloroplastic,CC_functional_completeness:complete,CC_gene:CLPP5,CC_gene:clpP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004973001~ ATP-dependent Clp protease proteolytic subunit 5%2C chloroplastic~ CLPP5~ complete;original_location=join(371610..371767%2C371942..372058%2C372298..372418%2C372545..372637%2C373197..373242%2C373338..373410%2C374356..374390%2C374490..374578%2C375162..375368);owner=coffea | |
| 29635 chr1 manual_curation exon 37821634 37821989 . - . Parent=GSCOCT00004973001 | |
| 29636 chr1 manual_curation exon 37821343 37821459 . - . Parent=GSCOCT00004973001 | |
| 29637 chr1 manual_curation exon 37820983 37821103 . - . Parent=GSCOCT00004973001 | |
| 29638 chr1 manual_curation exon 37820764 37820856 . - . Parent=GSCOCT00004973001 | |
| 29639 chr1 manual_curation exon 37820159 37820204 . - . Parent=GSCOCT00004973001 | |
| 29640 chr1 manual_curation exon 37819991 37820063 . - . Parent=GSCOCT00004973001 | |
| 29641 chr1 manual_curation exon 37819011 37819045 . - . Parent=GSCOCT00004973001 | |
| 29642 chr1 manual_curation exon 37818823 37818911 . - . Parent=GSCOCT00004973001 | |
| 29643 chr1 manual_curation exon 37816916 37818239 . - . Parent=GSCOCT00004973001 | |
| 29644 chr1 manual_curation CDS 37821634 37821791 . - 0 Parent=GSCOCT00004973001 | |
| 29645 chr1 manual_curation CDS 37821343 37821459 . - 2 Parent=GSCOCT00004973001 | |
| 29646 chr1 manual_curation CDS 37820983 37821103 . - 2 Parent=GSCOCT00004973001 | |
| 29647 chr1 manual_curation CDS 37820764 37820856 . - 0 Parent=GSCOCT00004973001 | |
| 29648 chr1 manual_curation CDS 37820159 37820204 . - 0 Parent=GSCOCT00004973001 | |
| 29649 chr1 manual_curation CDS 37819991 37820063 . - 1 Parent=GSCOCT00004973001 | |
| 29650 chr1 manual_curation CDS 37819011 37819045 . - 2 Parent=GSCOCT00004973001 | |
| 29651 chr1 manual_curation CDS 37818823 37818911 . - 1 Parent=GSCOCT00004973001 | |
| 29652 chr1 manual_curation CDS 37818033 37818239 . - 0 Parent=GSCOCT00004973001 | |
| 29653 chr1 manual_curation gene 37823011 37828165 . - . ID=GSCOCG00004972001;Name=Cc01_g21510 | |
| 29654 chr1 manual_curation mRNA 37823011 37828165 . - . ID=GSCOCT00004972001;Parent=GSCOCG00004972001;Name=Cc01_g21510 | |
| 29655 chr1 manual_curation polypeptide 37823665 37826768 . - . ID=GSCOCP00004972001;Dbxref=InterPro:IPR006880,InterPro:IPR007529,PFAM:PF04438,PFAM:PF04795,TAIR:AT1G56460.2,TAIR:AT2G47350.1,TAIR:AT3G06660.1,TrEMBL:B9I6Z0,TrEMBL:F6HZA4,TrEMBL:I1NBD4;Derives_from=GSCOCT00004972001;Name=Cc01_g21510;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative HIT zinc finger %3BPAPA-1-like conserved region,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004972001~ Putative HIT zinc finger %3BPAPA-1-like conserved region~ unknown_gene~ complete;original_location=join(366633..367190%2C367904..368519%2C368623..368723%2C368799..368888%2C369004..369131%2C369586..369736);owner=coffea | |
| 29656 chr1 manual_curation exon 37826211 37828165 . - . Parent=GSCOCT00004972001 | |
| 29657 chr1 manual_curation exon 37824882 37825497 . - . Parent=GSCOCT00004972001 | |
| 29658 chr1 manual_curation exon 37824678 37824778 . - . Parent=GSCOCT00004972001 | |
| 29659 chr1 manual_curation exon 37824513 37824602 . - . Parent=GSCOCT00004972001 | |
| 29660 chr1 manual_curation exon 37824270 37824397 . - . Parent=GSCOCT00004972001 | |
| 29661 chr1 manual_curation exon 37823011 37823815 . - . Parent=GSCOCT00004972001 | |
| 29662 chr1 manual_curation CDS 37826211 37826768 . - 0 Parent=GSCOCT00004972001 | |
| 29663 chr1 manual_curation CDS 37824882 37825497 . - 0 Parent=GSCOCT00004972001 | |
| 29664 chr1 manual_curation CDS 37824678 37824778 . - 1 Parent=GSCOCT00004972001 | |
| 29665 chr1 manual_curation CDS 37824513 37824602 . - 0 Parent=GSCOCT00004972001 | |
| 29666 chr1 manual_curation CDS 37824270 37824397 . - 0 Parent=GSCOCT00004972001 | |
| 29667 chr1 manual_curation CDS 37823665 37823815 . - 2 Parent=GSCOCT00004972001 | |
| 29668 chr1 manual_curation gene 37833995 37838757 . - . ID=GSCOCG00004971001;Name=Cc01_g21520 | |
| 29669 chr1 manual_curation mRNA 37833995 37838757 . - . ID=GSCOCT00004971001;Parent=GSCOCG00004971001;Name=Cc01_g21520 | |
| 29670 chr1 manual_curation polypeptide 37834417 37838117 . - . ID=GSCOCP00004971001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q8RWW0,SwissProt:Q9C660,SwissProt:Q9SX31,TAIR:AT2G20300.1,TAIR:AT4G02010.1,TAIR:AT5G56890.1,TrEMBL:A5BHN7,TrEMBL:D7M462,TrEMBL:D7U2J5;Derives_from=GSCOCT00004971001;Name=Cc01_g21520;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.10.2,PRODUCT:Protein kinase superfamily protein,CC_functional_completeness:complete,CC_gene:ALE2,CC_gene:PERK9,CC_gene:PERK10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004971001~ Protein kinase superfamily protein~ ALE2~ complete;original_location=join(355284..355335%2C355988..356443%2C356633..357004%2C357137..357349%2C357446..357826%2C357999..358242%2C358313..358460%2C358610..358984);owner=coffea | |
| 29671 chr1 manual_curation exon 37838066 37838757 . - . Parent=GSCOCT00004971001 | |
| 29672 chr1 manual_curation exon 37836958 37837413 . - . Parent=GSCOCT00004971001 | |
| 29673 chr1 manual_curation exon 37836397 37836768 . - . Parent=GSCOCT00004971001 | |
| 29674 chr1 manual_curation exon 37836052 37836264 . - . Parent=GSCOCT00004971001 | |
| 29675 chr1 manual_curation exon 37835575 37835955 . - . Parent=GSCOCT00004971001 | |
| 29676 chr1 manual_curation exon 37835159 37835402 . - . Parent=GSCOCT00004971001 | |
| 29677 chr1 manual_curation exon 37834941 37835088 . - . Parent=GSCOCT00004971001 | |
| 29678 chr1 manual_curation exon 37833995 37834791 . - . Parent=GSCOCT00004971001 | |
| 29679 chr1 manual_curation CDS 37838066 37838117 . - 0 Parent=GSCOCT00004971001 | |
| 29680 chr1 manual_curation CDS 37836958 37837413 . - 1 Parent=GSCOCT00004971001 | |
| 29681 chr1 manual_curation CDS 37836397 37836768 . - 1 Parent=GSCOCT00004971001 | |
| 29682 chr1 manual_curation CDS 37836052 37836264 . - 1 Parent=GSCOCT00004971001 | |
| 29683 chr1 manual_curation CDS 37835575 37835955 . - 1 Parent=GSCOCT00004971001 | |
| 29684 chr1 manual_curation CDS 37835159 37835402 . - 1 Parent=GSCOCT00004971001 | |
| 29685 chr1 manual_curation CDS 37834941 37835088 . - 2 Parent=GSCOCT00004971001 | |
| 29686 chr1 manual_curation CDS 37834417 37834791 . - 0 Parent=GSCOCT00004971001 | |
| 29687 chr1 manual_curation gene 37846515 37852092 . + . ID=GSCOCG00004969001;Name=Cc01_g21530 | |
| 29688 chr1 manual_curation mRNA 37846515 37852092 . + . ID=GSCOCT00004969001;Parent=GSCOCG00004969001;Name=Cc01_g21530 | |
| 29689 chr1 manual_curation polypeptide 37846851 37851812 . + . ID=GSCOCP00004969001;Dbxref=InterPro:IPR000629,InterPro:IPR001650,InterPro:IPR011545,InterPro:IPR014001,InterPro:IPR014014,InterPro:IPR014021,PFAM:PF00270,PFAM:PF00271,PROFILE:PS51192,PROFILE:PS51194,PROFILE:PS51195,PROSITE:PS00039,SMART:SM00487,SMART:SM00490,SwissProt:O22907,SwissProt:Q10MH8,SwissProt:Q810A7,TAIR:AT1G20920.1,TAIR:AT2G47330.1,TAIR:AT5G63120.2,TrEMBL:A5BHN5,TrEMBL:B9RNC8,TrEMBL:D7U2J6;Derives_from=GSCOCT00004969001;Name=Cc01_g21530;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0004386,GO:0005524,GO:0008026,CC_EC_number:missing_EC_number,PRODUCT:DEAD-box ATP-dependent RNA helicase 24,CC_functional_completeness:complete,CC_gene:RH24,CC_gene:Os03g0308500,CC_gene:Ddx42;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004969001~ DEAD-box ATP-dependent RNA helicase 24~ RH24~ complete;original_location=complement(join(345941..346550%2C343469..344697%2C342448..342487%2C341776..342181%2C341589..341640));owner=coffea | |
| 29690 chr1 manual_curation exon 37851761 37852092 . + . Parent=GSCOCT00004969001 | |
| 29691 chr1 manual_curation exon 37851220 37851625 . + . Parent=GSCOCT00004969001 | |
| 29692 chr1 manual_curation exon 37850914 37850953 . + . Parent=GSCOCT00004969001 | |
| 29693 chr1 manual_curation exon 37848704 37849932 . + . Parent=GSCOCT00004969001 | |
| 29694 chr1 manual_curation exon 37846515 37847460 . + . Parent=GSCOCT00004969001 | |
| 29695 chr1 manual_curation CDS 37851761 37851812 . + 2 Parent=GSCOCT00004969001 | |
| 29696 chr1 manual_curation CDS 37851220 37851625 . + 1 Parent=GSCOCT00004969001 | |
| 29697 chr1 manual_curation CDS 37850914 37850953 . + 0 Parent=GSCOCT00004969001 | |
| 29698 chr1 manual_curation CDS 37848704 37849932 . + 1 Parent=GSCOCT00004969001 | |
| 29699 chr1 manual_curation CDS 37846851 37847460 . + 0 Parent=GSCOCT00004969001 | |
| 29700 chr1 manual_curation gene 37852214 37855071 . - . ID=GSCOCG00004968001;Name=Cc01_g21540 | |
| 29701 chr1 manual_curation mRNA 37852214 37855071 . - . ID=GSCOCT00004968001;Parent=GSCOCG00004968001;Name=Cc01_g21540 | |
| 29702 chr1 manual_curation polypeptide 37852659 37855071 . - . ID=GSCOCP00004968001;Dbxref=TAIR:AT1G03055.1,TAIR:AT1G64680.1,TAIR:AT4G01995.1,TrEMBL:B9GSU3,TrEMBL:D7U2J7,TrEMBL:G7ICW5;Derives_from=GSCOCT00004968001;Name=Cc01_g21540;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004968001~ Putative uncharacterized protein~ unknown_gene~ modules;original_location=join(338330..338484%2C338598..338697%2C339017..339118%2C339206..339305%2C339555..339646%2C340211..340291%2C340356..340424%2C340590..340742);owner=coffea | |
| 29703 chr1 manual_curation exon 37854917 37855071 . - . Parent=GSCOCT00004968001 | |
| 29704 chr1 manual_curation exon 37854704 37854803 . - . Parent=GSCOCT00004968001 | |
| 29705 chr1 manual_curation exon 37854283 37854384 . - . Parent=GSCOCT00004968001 | |
| 29706 chr1 manual_curation exon 37854096 37854195 . - . Parent=GSCOCT00004968001 | |
| 29707 chr1 manual_curation exon 37853755 37853846 . - . Parent=GSCOCT00004968001 | |
| 29708 chr1 manual_curation exon 37853110 37853190 . - . Parent=GSCOCT00004968001 | |
| 29709 chr1 manual_curation exon 37852977 37853045 . - . Parent=GSCOCT00004968001 | |
| 29710 chr1 manual_curation exon 37852214 37852811 . - . Parent=GSCOCT00004968001 | |
| 29711 chr1 manual_curation CDS 37854917 37855071 . - 0 Parent=GSCOCT00004968001 | |
| 29712 chr1 manual_curation CDS 37854704 37854803 . - 2 Parent=GSCOCT00004968001 | |
| 29713 chr1 manual_curation CDS 37854283 37854384 . - 0 Parent=GSCOCT00004968001 | |
| 29714 chr1 manual_curation CDS 37854096 37854195 . - 0 Parent=GSCOCT00004968001 | |
| 29715 chr1 manual_curation CDS 37853755 37853846 . - 1 Parent=GSCOCT00004968001 | |
| 29716 chr1 manual_curation CDS 37853110 37853190 . - 0 Parent=GSCOCT00004968001 | |
| 29717 chr1 manual_curation CDS 37852977 37853045 . - 0 Parent=GSCOCT00004968001 | |
| 29718 chr1 manual_curation CDS 37852659 37852811 . - 0 Parent=GSCOCT00004968001 | |
| 29719 chr1 manual_curation gene 37856241 37858492 . + . ID=GSCOCG00004967001;Name=Cc01_g21550 | |
| 29720 chr1 manual_curation mRNA 37856241 37858492 . + . ID=GSCOCT00004967001;Parent=GSCOCG00004967001;Name=Cc01_g21550 | |
| 29721 chr1 manual_curation polypeptide 37856341 37858281 . + . ID=GSCOCP00004967001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:O22714,SwissProt:Q93WC5,SwissProt:Q9FZ24,TAIR:AT1G02370.1,TAIR:AT1G60770.1,TAIR:AT4G01990.1,TIGRFAMs:TIGR00756,TrEMBL:B9GSU4,TrEMBL:B9RNC6,TrEMBL:F6HZA7;Derives_from=GSCOCT00004967001;Name=Cc01_g21550;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Pentatricopeptide repeat-containing protein At1g02370%2C mitochondrial,CC_functional_completeness:complete,CC_gene:At1g02370,CC_gene:At4g01990,CC_gene:At1g60770;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004967001~ Putative Pentatricopeptide repeat-containing protein At1g02370%2C mitochondrial~ At1g02370~ complete;original_location=complement(join(336773..337060%2C335120..336355));owner=coffea | |
| 29722 chr1 manual_curation exon 37857046 37858492 . + . Parent=GSCOCT00004967001 | |
| 29723 chr1 manual_curation exon 37856241 37856628 . + . Parent=GSCOCT00004967001 | |
| 29724 chr1 manual_curation CDS 37857046 37858281 . + 0 Parent=GSCOCT00004967001 | |
| 29725 chr1 manual_curation CDS 37856341 37856628 . + 0 Parent=GSCOCT00004967001 | |
| 29726 chr1 manual_curation gene 37858641 37862723 . - . ID=GSCOCG00004966001;Name=Cc01_g21560 | |
| 29727 chr1 manual_curation mRNA 37858641 37862723 . - . ID=GSCOCT00004966001;Parent=GSCOCG00004966001;Name=Cc01_g21560 | |
| 29728 chr1 manual_curation polypeptide 37859134 37862214 . - . ID=GSCOCP00004966001;Dbxref=GENE3D:G3DSA:2.40.100.10,InterPro:IPR002130,InterPro:IPR015891,PFAM:PF00160,PRINTS:PR00153,PROFILE:PS50072,SUPERFAMILY:SSF50891,SwissProt:O74942,SwissProt:P0C1J1,SwissProt:Q94A16,TAIR:AT2G47320.1,TAIR:AT3G44600.1,TAIR:AT3G66654.1,TrEMBL:C6T7D2,TrEMBL:I1NHJ6,TrEMBL:I1NHJ9;Derives_from=GSCOCT00004966001;Name=Cc01_g21560;Ontology_term=CC_evidence_code:ISS,GO:0003755,GO:0006457,CC_EC_number:5.2.1.8,PRODUCT:Peptidyl-prolyl cis-trans isomerase CYP21-3%2C mitochondrial,CC_functional_completeness:complete,CC_gene:CYP21-3,CC_gene:cyp14,CC_gene:cyp9;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004966001~ Peptidyl-prolyl cis-trans isomerase CYP21-3%2C mitochondrial~ CYP21-3~ complete;original_location=join(331187..331338%2C331451..331490%2C331630..331680%2C331986..332071%2C333498..333635%2C333736..333886%2C334181..334267);owner=coffea | |
| 29729 chr1 manual_curation exon 37862483 37862723 . - . Parent=GSCOCT00004966001 | |
| 29730 chr1 manual_curation exon 37862063 37862296 . - . Parent=GSCOCT00004966001 | |
| 29731 chr1 manual_curation exon 37861911 37861950 . - . Parent=GSCOCT00004966001 | |
| 29732 chr1 manual_curation exon 37861721 37861771 . - . Parent=GSCOCT00004966001 | |
| 29733 chr1 manual_curation exon 37861330 37861415 . - . Parent=GSCOCT00004966001 | |
| 29734 chr1 manual_curation exon 37859766 37859903 . - . Parent=GSCOCT00004966001 | |
| 29735 chr1 manual_curation exon 37859515 37859665 . - . Parent=GSCOCT00004966001 | |
| 29736 chr1 manual_curation exon 37858641 37859220 . - . Parent=GSCOCT00004966001 | |
| 29737 chr1 manual_curation CDS 37862063 37862214 . - 0 Parent=GSCOCT00004966001 | |
| 29738 chr1 manual_curation CDS 37861911 37861950 . - 2 Parent=GSCOCT00004966001 | |
| 29739 chr1 manual_curation CDS 37861721 37861771 . - 0 Parent=GSCOCT00004966001 | |
| 29740 chr1 manual_curation CDS 37861330 37861415 . - 0 Parent=GSCOCT00004966001 | |
| 29741 chr1 manual_curation CDS 37859766 37859903 . - 2 Parent=GSCOCT00004966001 | |
| 29742 chr1 manual_curation CDS 37859515 37859665 . - 2 Parent=GSCOCT00004966001 | |
| 29743 chr1 manual_curation CDS 37859134 37859220 . - 0 Parent=GSCOCT00004966001 | |
| 29744 chr1 manual_curation gene 37866823 37869468 . - . ID=GSCOCG00004965001;Name=Cc01_g21570 | |
| 29745 chr1 manual_curation mRNA 37866823 37869468 . - . ID=GSCOCT00004965001;Parent=GSCOCG00004965001;Name=Cc01_g21570 | |
| 29746 chr1 manual_curation polypeptide 37866823 37869468 . - . ID=GSCOCP00004965001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR020635,InterPro:IPR021720,PFAM:PF07714,PFAM:PF11721,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q3E8W4,SwissProt:Q9SCZ4,SwissProt:Q9SR05,TAIR:AT3G04690.1,TAIR:AT3G51550.1,TAIR:AT5G28680.1,TrEMBL:B9RZQ7,TrEMBL:D7SYL0,TrEMBL:F6HZA8;Derives_from=GSCOCT00004965001;Name=Cc01_g21570;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Receptor-like protein kinase ANXUR1,CC_functional_completeness:complete,CC_gene:ANX1,CC_gene:ANX2,CC_gene:FER;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004965001~ Receptor-like protein kinase ANXUR1~ ANX1~ complete;original_location=323933..326578;owner=coffea | |
| 29747 chr1 manual_curation exon 37866823 37869468 . - . Parent=GSCOCT00004965001 | |
| 29748 chr1 manual_curation CDS 37866823 37869468 . - 0 Parent=GSCOCT00004965001 | |
| 29749 chr1 manual_curation gene 37871224 37887250 . + . ID=GSCOCG00004964001;Name=Cc01_g21580 | |
| 29750 chr1 manual_curation mRNA 37871224 37887250 . + . ID=GSCOCT00004964001;Parent=GSCOCG00004964001;Name=Cc01_g21580 | |
| 29751 chr1 manual_curation polypeptide 37871463 37886715 . + . ID=GSCOCP00004964001;Dbxref=InterPro:IPR008969,InterPro:IPR013784,SUPERFAMILY:SSF49452,SUPERFAMILY:SSF49464,SwissProt:P69849,SwissProt:Q15155,SwissProt:Q5JPE7,TAIR:AT3G62360.1,TrEMBL:B9RNC2,TrEMBL:D7U2J9,TrEMBL:I1NBD7;Derives_from=GSCOCT00004964001;Name=Cc01_g21580;Ontology_term=CC_evidence_code:ISS,GO:0030246,CC_EC_number:missing_EC_number,PRODUCT:Putative Nodal modulator 2,CC_functional_completeness:complete,CC_gene:NOMO2,CC_gene:NOMO3,CC_gene:NOMO1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004964001~ Putative Nodal modulator 2~ NOMO2~ complete;original_location=complement(join(321810..321938%2C321420..321485%2C320812..320898%2C319867..319923%2C319678..319742%2C319409..319578%2C319034..319095%2C318791..318874%2C317661..317820%2C316980..317095%2C316559..316687%2C315772..315843%2C315500..315595%2C314273..314350%2C313077..313205%2C312575..312751%2C311800..312003%2C311596..311709%2C311240..311487%2C310511..310559%2C310155..310403%2C309523..309753%2C309124..309215%2C307899..308127%2C307170..307526%2C306887..306960%2C306686..306791));owner=coffea | |
| 29752 chr1 manual_curation exon 37886610 37887250 . + . Parent=GSCOCT00004964001 | |
| 29753 chr1 manual_curation exon 37886441 37886514 . + . Parent=GSCOCT00004964001 | |
| 29754 chr1 manual_curation exon 37885875 37886231 . + . Parent=GSCOCT00004964001 | |
| 29755 chr1 manual_curation exon 37885274 37885502 . + . Parent=GSCOCT00004964001 | |
| 29756 chr1 manual_curation exon 37884186 37884277 . + . Parent=GSCOCT00004964001 | |
| 29757 chr1 manual_curation exon 37883648 37883878 . + . Parent=GSCOCT00004964001 | |
| 29758 chr1 manual_curation exon 37882998 37883246 . + . Parent=GSCOCT00004964001 | |
| 29759 chr1 manual_curation exon 37882842 37882890 . + . Parent=GSCOCT00004964001 | |
| 29760 chr1 manual_curation exon 37881914 37882161 . + . Parent=GSCOCT00004964001 | |
| 29761 chr1 manual_curation exon 37881692 37881805 . + . Parent=GSCOCT00004964001 | |
| 29762 chr1 manual_curation exon 37881398 37881601 . + . Parent=GSCOCT00004964001 | |
| 29763 chr1 manual_curation exon 37880650 37880826 . + . Parent=GSCOCT00004964001 | |
| 29764 chr1 manual_curation exon 37880196 37880324 . + . Parent=GSCOCT00004964001 | |
| 29765 chr1 manual_curation exon 37879051 37879128 . + . Parent=GSCOCT00004964001 | |
| 29766 chr1 manual_curation exon 37877806 37877901 . + . Parent=GSCOCT00004964001 | |
| 29767 chr1 manual_curation exon 37877558 37877629 . + . Parent=GSCOCT00004964001 | |
| 29768 chr1 manual_curation exon 37876714 37876842 . + . Parent=GSCOCT00004964001 | |
| 29769 chr1 manual_curation exon 37876306 37876421 . + . Parent=GSCOCT00004964001 | |
| 29770 chr1 manual_curation exon 37875581 37875740 . + . Parent=GSCOCT00004964001 | |
| 29771 chr1 manual_curation exon 37874527 37874610 . + . Parent=GSCOCT00004964001 | |
| 29772 chr1 manual_curation exon 37874306 37874367 . + . Parent=GSCOCT00004964001 | |
| 29773 chr1 manual_curation exon 37873823 37873992 . + . Parent=GSCOCT00004964001 | |
| 29774 chr1 manual_curation exon 37873659 37873723 . + . Parent=GSCOCT00004964001 | |
| 29775 chr1 manual_curation exon 37873478 37873534 . + . Parent=GSCOCT00004964001 | |
| 29776 chr1 manual_curation exon 37872503 37872589 . + . Parent=GSCOCT00004964001 | |
| 29777 chr1 manual_curation exon 37871916 37871981 . + . Parent=GSCOCT00004964001 | |
| 29778 chr1 manual_curation exon 37871224 37871591 . + . Parent=GSCOCT00004964001 | |
| 29779 chr1 manual_curation CDS 37886610 37886715 . + 2 Parent=GSCOCT00004964001 | |
| 29780 chr1 manual_curation CDS 37886441 37886514 . + 0 Parent=GSCOCT00004964001 | |
| 29781 chr1 manual_curation CDS 37885875 37886231 . + 0 Parent=GSCOCT00004964001 | |
| 29782 chr1 manual_curation CDS 37885274 37885502 . + 2 Parent=GSCOCT00004964001 | |
| 29783 chr1 manual_curation CDS 37884186 37884277 . + 0 Parent=GSCOCT00004964001 | |
| 29784 chr1 manual_curation CDS 37883648 37883878 . + 0 Parent=GSCOCT00004964001 | |
| 29785 chr1 manual_curation CDS 37882998 37883246 . + 0 Parent=GSCOCT00004964001 | |
| 29786 chr1 manual_curation CDS 37882842 37882890 . + 2 Parent=GSCOCT00004964001 | |
| 29787 chr1 manual_curation CDS 37881914 37882161 . + 0 Parent=GSCOCT00004964001 | |
| 29788 chr1 manual_curation CDS 37881692 37881805 . + 0 Parent=GSCOCT00004964001 | |
| 29789 chr1 manual_curation CDS 37881398 37881601 . + 0 Parent=GSCOCT00004964001 | |
| 29790 chr1 manual_curation CDS 37880650 37880826 . + 0 Parent=GSCOCT00004964001 | |
| 29791 chr1 manual_curation CDS 37880196 37880324 . + 0 Parent=GSCOCT00004964001 | |
| 29792 chr1 manual_curation CDS 37879051 37879128 . + 0 Parent=GSCOCT00004964001 | |
| 29793 chr1 manual_curation CDS 37877806 37877901 . + 0 Parent=GSCOCT00004964001 | |
| 29794 chr1 manual_curation CDS 37877558 37877629 . + 0 Parent=GSCOCT00004964001 | |
| 29795 chr1 manual_curation CDS 37876714 37876842 . + 0 Parent=GSCOCT00004964001 | |
| 29796 chr1 manual_curation CDS 37876306 37876421 . + 1 Parent=GSCOCT00004964001 | |
| 29797 chr1 manual_curation CDS 37875581 37875740 . + 0 Parent=GSCOCT00004964001 | |
| 29798 chr1 manual_curation CDS 37874527 37874610 . + 0 Parent=GSCOCT00004964001 | |
| 29799 chr1 manual_curation CDS 37874306 37874367 . + 1 Parent=GSCOCT00004964001 | |
| 29800 chr1 manual_curation CDS 37873823 37873992 . + 2 Parent=GSCOCT00004964001 | |
| 29801 chr1 manual_curation CDS 37873659 37873723 . + 0 Parent=GSCOCT00004964001 | |
| 29802 chr1 manual_curation CDS 37873478 37873534 . + 0 Parent=GSCOCT00004964001 | |
| 29803 chr1 manual_curation CDS 37872503 37872589 . + 0 Parent=GSCOCT00004964001 | |
| 29804 chr1 manual_curation CDS 37871916 37871981 . + 0 Parent=GSCOCT00004964001 | |
| 29805 chr1 manual_curation CDS 37871463 37871591 . + 0 Parent=GSCOCT00004964001 | |
| 29806 chr1 manual_curation gene 37887818 37891571 . + . ID=GSCOCG00004963001;Name=Cc01_g21590 | |
| 29807 chr1 manual_curation mRNA 37887818 37891571 . + . ID=GSCOCT00004963001;Parent=GSCOCG00004963001;Name=Cc01_g21590 | |
| 29808 chr1 manual_curation polypeptide 37887818 37891144 . + . ID=GSCOCP00004963001;Dbxref=GENE3D:G3DSA:1.25.40.10,InterPro:IPR002625,InterPro:IPR002885,InterPro:IPR011990,PFAM:PF01535,PROFILE:PS50828,PROFILE:PS51375,SMART:SM00463,SwissProt:Q9LYZ9,SwissProt:Q9S7Q2,SwissProt:Q9SIC9,TAIR:AT1G74850.1,TAIR:AT2G31400.1,TAIR:AT5G02860.1,TIGRFAMs:TIGR00756,TrEMBL:B9RNC1,TrEMBL:D7LDK6,TrEMBL:F6HZA9;Derives_from=GSCOCT00004963001;Name=Cc01_g21590;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At2g31400%2C chloroplastic,CC_functional_completeness:complete,CC_gene:At2g31400,CC_gene:PTAC2,CC_gene:At5g02860;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004963001~ Pentatricopeptide repeat-containing protein At2g31400%2C chloroplastic~ At2g31400~ complete;original_location=complement(join(303650..305583%2C303323..303539%2C302678..302862%2C302257..302521));owner=coffea | |
| 29809 chr1 manual_curation exon 37890880 37891571 . + . Parent=GSCOCT00004963001 | |
| 29810 chr1 manual_curation exon 37890539 37890723 . + . Parent=GSCOCT00004963001 | |
| 29811 chr1 manual_curation exon 37889862 37890078 . + . Parent=GSCOCT00004963001 | |
| 29812 chr1 manual_curation exon 37887818 37889751 . + . Parent=GSCOCT00004963001 | |
| 29813 chr1 manual_curation CDS 37890880 37891144 . + 2 Parent=GSCOCT00004963001 | |
| 29814 chr1 manual_curation CDS 37890539 37890723 . + 0 Parent=GSCOCT00004963001 | |
| 29815 chr1 manual_curation CDS 37889862 37890078 . + 2 Parent=GSCOCT00004963001 | |
| 29816 chr1 manual_curation CDS 37887818 37889751 . + 0 Parent=GSCOCT00004963001 | |
| 29817 chr1 manual_curation gene 37895523 37898824 . + . ID=GSCOCG00004961001;Name=Cc01_g21600 | |
| 29818 chr1 manual_curation mRNA 37895523 37898824 . + . ID=GSCOCT00004961001;Parent=GSCOCG00004961001;Name=Cc01_g21600 | |
| 29819 chr1 manual_curation polypeptide 37895523 37898596 . + . ID=GSCOCP00004961001;Dbxref=InterPro:IPR008811,InterPro:IPR017853,PFAM:PF05691,SUPERFAMILY:SSF51445,SwissProt:Q93XK2,SwissProt:Q9FND9,SwissProt:Q9SYJ4,TAIR:AT4G01970.1,TAIR:AT5G20250.4,TAIR:AT5G40390.1,TrEMBL:B9I9G9,TrEMBL:B9RNB5,TrEMBL:Q8RW08;Derives_from=GSCOCT00004961001;Name=Cc01_g21600;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.4.1.67,PRODUCT:Stachyose synthase,CC_functional_completeness:complete,CC_gene:STS1,CC_gene:RFS4,CC_gene:RFS5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004961001~ Stachyose synthase~ STS1~ complete;original_location=complement(join(296364..297878%2C296095..296272%2C295506..295873%2C294805..295398));owner=coffea | |
| 29820 chr1 manual_curation exon 37898003 37898824 . + . Parent=GSCOCT00004961001 | |
| 29821 chr1 manual_curation exon 37897528 37897895 . + . Parent=GSCOCT00004961001 | |
| 29822 chr1 manual_curation exon 37897129 37897306 . + . Parent=GSCOCT00004961001 | |
| 29823 chr1 manual_curation exon 37895523 37897037 . + . Parent=GSCOCT00004961001 | |
| 29824 chr1 manual_curation CDS 37898003 37898596 . + 0 Parent=GSCOCT00004961001 | |
| 29825 chr1 manual_curation CDS 37897528 37897895 . + 1 Parent=GSCOCT00004961001 | |
| 29826 chr1 manual_curation CDS 37897129 37897306 . + 0 Parent=GSCOCT00004961001 | |
| 29827 chr1 manual_curation CDS 37895523 37897037 . + 0 Parent=GSCOCT00004961001 | |
| 29828 chr1 manual_curation gene 37899885 37907764 . - . ID=GSCOCG00004959001;Name=Cc01_g21610 | |
| 29829 chr1 manual_curation mRNA 37899885 37907764 . - . ID=GSCOCT00004959001;Parent=GSCOCG00004959001;Name=Cc01_g21610 | |
| 29830 chr1 manual_curation polypeptide 37900138 37907764 . - . ID=GSCOCP00004959001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR001202,InterPro:IPR012677,InterPro:IPR015903,PANTHER:PTHR10432:SF35,PFAM:PF00076,PFAM:PF00397,PROFILE:PS50020,PROFILE:PS50102,PROSITE:PS01159,SMART:SM00360,SMART:SM00456,SUPERFAMILY:SSF51045,SwissProt:O04425,SwissProt:Q5NVC8,SwissProt:Q7TSY6,TAIR:AT1G03457.2,TAIR:AT2G47310.1,TAIR:AT4G16280.2,TrEMBL:F6H711,TrEMBL:I1KMP5,TrEMBL:I1MRT0;Derives_from=GSCOCT00004959001;Name=Cc01_g21610;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:FCA,CC_gene:Celf4,CC_gene:CELF4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004959001~ Hypothetical protein~ FCA~ missing_functional_completeness;original_location=join(285637..286027%2C286172..286245%2C286704..286782%2C287768..287850%2C287949..288000%2C290386..290462%2C290950..291016%2C291254..291333%2C291410..291474%2C292098..292152%2C292879..293073%2C293180..293263);owner=coffea | |
| 29831 chr1 manual_curation exon 37907374 37907764 . - . Parent=GSCOCT00004959001 | |
| 29832 chr1 manual_curation exon 37907156 37907229 . - . Parent=GSCOCT00004959001 | |
| 29833 chr1 manual_curation exon 37906619 37906697 . - . Parent=GSCOCT00004959001 | |
| 29834 chr1 manual_curation exon 37905551 37905633 . - . Parent=GSCOCT00004959001 | |
| 29835 chr1 manual_curation exon 37905401 37905452 . - . Parent=GSCOCT00004959001 | |
| 29836 chr1 manual_curation exon 37902939 37903015 . - . Parent=GSCOCT00004959001 | |
| 29837 chr1 manual_curation exon 37902385 37902451 . - . Parent=GSCOCT00004959001 | |
| 29838 chr1 manual_curation exon 37902068 37902147 . - . Parent=GSCOCT00004959001 | |
| 29839 chr1 manual_curation exon 37901927 37901991 . - . Parent=GSCOCT00004959001 | |
| 29840 chr1 manual_curation exon 37901249 37901303 . - . Parent=GSCOCT00004959001 | |
| 29841 chr1 manual_curation exon 37900328 37900522 . - . Parent=GSCOCT00004959001 | |
| 29842 chr1 manual_curation exon 37899885 37900221 . - . Parent=GSCOCT00004959001 | |
| 29843 chr1 manual_curation CDS 37907374 37907764 . - 0 Parent=GSCOCT00004959001 | |
| 29844 chr1 manual_curation CDS 37907156 37907229 . - 1 Parent=GSCOCT00004959001 | |
| 29845 chr1 manual_curation CDS 37906619 37906697 . - 0 Parent=GSCOCT00004959001 | |
| 29846 chr1 manual_curation CDS 37905551 37905633 . - 1 Parent=GSCOCT00004959001 | |
| 29847 chr1 manual_curation CDS 37905401 37905452 . - 0 Parent=GSCOCT00004959001 | |
| 29848 chr1 manual_curation CDS 37902939 37903015 . - 1 Parent=GSCOCT00004959001 | |
| 29849 chr1 manual_curation CDS 37902385 37902451 . - 0 Parent=GSCOCT00004959001 | |
| 29850 chr1 manual_curation CDS 37902068 37902147 . - 1 Parent=GSCOCT00004959001 | |
| 29851 chr1 manual_curation CDS 37901927 37901991 . - 0 Parent=GSCOCT00004959001 | |
| 29852 chr1 manual_curation CDS 37901249 37901303 . - 2 Parent=GSCOCT00004959001 | |
| 29853 chr1 manual_curation CDS 37900328 37900522 . - 0 Parent=GSCOCT00004959001 | |
| 29854 chr1 manual_curation CDS 37900138 37900221 . - 0 Parent=GSCOCT00004959001 | |
| 29855 chr1 manual_curation gene 37909069 37914517 . - . ID=GSCOCG00004958001;Name=Cc01_g21620 | |
| 29856 chr1 manual_curation mRNA 37909069 37914517 . - . ID=GSCOCT00004958001;Parent=GSCOCG00004958001;Name=Cc01_g21620 | |
| 29857 chr1 manual_curation polypeptide 37909611 37914517 . - . ID=GSCOCP00004958001;Dbxref=InterPro:IPR000873,InterPro:IPR020845,PFAM:PF00501,PROSITE:PS00455,SwissProt:O22898,SwissProt:Q9C7W4,SwissProt:Q9T0A0,TAIR:AT1G64400.1,TAIR:AT2G47240.1,TAIR:AT4G23850.1,TrEMBL:B9GSW4,TrEMBL:D7U2L2,TrEMBL:I1NBE7;Derives_from=GSCOCT00004958001;Name=Cc01_g21620;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,CC_EC_number:6.2.1.3,PRODUCT:Long chain acyl-CoA synthetase 1,CC_functional_completeness:fragment,CC_gene:LACS1,CC_gene:LACS4,CC_gene:LACS3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004958001~ Long chain acyl-CoA synthetase 1~ LACS1~ fragment;original_location=join(278884..278937%2C279583..279750%2C280047..280157%2C280549..280626%2C280693..280787%2C280899..280974%2C281291..281408%2C282087..282332%2C282432..282571%2C282684..282866%2C283455..283574%2C283743..283790);owner=coffea | |
| 29858 chr1 manual_curation exon 37914464 37914517 . - . Parent=GSCOCT00004958001 | |
| 29859 chr1 manual_curation exon 37913651 37913818 . - . Parent=GSCOCT00004958001 | |
| 29860 chr1 manual_curation exon 37913244 37913354 . - . Parent=GSCOCT00004958001 | |
| 29861 chr1 manual_curation exon 37912775 37912852 . - . Parent=GSCOCT00004958001 | |
| 29862 chr1 manual_curation exon 37912614 37912708 . - . Parent=GSCOCT00004958001 | |
| 29863 chr1 manual_curation exon 37912427 37912502 . - . Parent=GSCOCT00004958001 | |
| 29864 chr1 manual_curation exon 37911993 37912110 . - . Parent=GSCOCT00004958001 | |
| 29865 chr1 manual_curation exon 37911069 37911314 . - . Parent=GSCOCT00004958001 | |
| 29866 chr1 manual_curation exon 37910830 37910969 . - . Parent=GSCOCT00004958001 | |
| 29867 chr1 manual_curation exon 37910535 37910717 . - . Parent=GSCOCT00004958001 | |
| 29868 chr1 manual_curation exon 37909827 37909946 . - . Parent=GSCOCT00004958001 | |
| 29869 chr1 manual_curation exon 37909069 37909658 . - . Parent=GSCOCT00004958001 | |
| 29870 chr1 manual_curation CDS 37914464 37914517 . - 0 Parent=GSCOCT00004958001 | |
| 29871 chr1 manual_curation CDS 37913651 37913818 . - 0 Parent=GSCOCT00004958001 | |
| 29872 chr1 manual_curation CDS 37913244 37913354 . - 0 Parent=GSCOCT00004958001 | |
| 29873 chr1 manual_curation CDS 37912775 37912852 . - 0 Parent=GSCOCT00004958001 | |
| 29874 chr1 manual_curation CDS 37912614 37912708 . - 0 Parent=GSCOCT00004958001 | |
| 29875 chr1 manual_curation CDS 37912427 37912502 . - 2 Parent=GSCOCT00004958001 | |
| 29876 chr1 manual_curation CDS 37911993 37912110 . - 0 Parent=GSCOCT00004958001 | |
| 29877 chr1 manual_curation CDS 37911069 37911314 . - 1 Parent=GSCOCT00004958001 | |
| 29878 chr1 manual_curation CDS 37910830 37910969 . - 1 Parent=GSCOCT00004958001 | |
| 29879 chr1 manual_curation CDS 37910535 37910717 . - 0 Parent=GSCOCT00004958001 | |
| 29880 chr1 manual_curation CDS 37909827 37909946 . - 0 Parent=GSCOCT00004958001 | |
| 29881 chr1 manual_curation CDS 37909611 37909658 . - 0 Parent=GSCOCT00004958001 | |
| 29882 chr1 manual_curation gene 37914734 37916959 . - . ID=GSCOCG00004957001;Name=Cc01_g21630 | |
| 29883 chr1 manual_curation mRNA 37914734 37916959 . - . ID=GSCOCT00004957001;Parent=GSCOCG00004957001;Name=Cc01_g21630 | |
| 29884 chr1 manual_curation polypeptide 37914734 37916780 . - . ID=GSCOCP00004957001;Dbxref=InterPro:IPR000873,PFAM:PF00501,SwissProt:O22898,SwissProt:Q9T009,SwissProt:Q9T0A0,TAIR:AT2G47240.1,TAIR:AT4G11030.1,TAIR:AT4G23850.1,TrEMBL:B9GSW4,TrEMBL:D7U2L2,TrEMBL:G7KTN5;Derives_from=GSCOCT00004957001;Name=Cc01_g21630;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,CC_EC_number:6.2.1.3,PRODUCT:Long chain acyl-CoA synthetase 1,CC_functional_completeness:fragment,CC_gene:LACS1,CC_gene:LACS4,CC_gene:LACS5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004957001~ Long chain acyl-CoA synthetase 1~ LACS1~ fragment;original_location=join(276621..276769%2C277000..277063%2C277232..277321%2C277481..277537%2C277722..277770%2C278255..278331%2C278428..278461%2C278552..278667);owner=coffea | |
| 29885 chr1 manual_curation exon 37916914 37916959 . - . Parent=GSCOCT00004957001 | |
| 29886 chr1 manual_curation exon 37916632 37916806 . - . Parent=GSCOCT00004957001 | |
| 29887 chr1 manual_curation exon 37916338 37916401 . - . Parent=GSCOCT00004957001 | |
| 29888 chr1 manual_curation exon 37916080 37916169 . - . Parent=GSCOCT00004957001 | |
| 29889 chr1 manual_curation exon 37915864 37915920 . - . Parent=GSCOCT00004957001 | |
| 29890 chr1 manual_curation exon 37915631 37915679 . - . Parent=GSCOCT00004957001 | |
| 29891 chr1 manual_curation exon 37915070 37915146 . - . Parent=GSCOCT00004957001 | |
| 29892 chr1 manual_curation exon 37914940 37914973 . - . Parent=GSCOCT00004957001 | |
| 29893 chr1 manual_curation exon 37914734 37914849 . - . Parent=GSCOCT00004957001 | |
| 29894 chr1 manual_curation CDS 37916632 37916780 . - 0 Parent=GSCOCT00004957001 | |
| 29895 chr1 manual_curation CDS 37916338 37916401 . - 2 Parent=GSCOCT00004957001 | |
| 29896 chr1 manual_curation CDS 37916080 37916169 . - 0 Parent=GSCOCT00004957001 | |
| 29897 chr1 manual_curation CDS 37915864 37915920 . - 0 Parent=GSCOCT00004957001 | |
| 29898 chr1 manual_curation CDS 37915631 37915679 . - 0 Parent=GSCOCT00004957001 | |
| 29899 chr1 manual_curation CDS 37915070 37915146 . - 1 Parent=GSCOCT00004957001 | |
| 29900 chr1 manual_curation CDS 37914940 37914973 . - 0 Parent=GSCOCT00004957001 | |
| 29901 chr1 manual_curation CDS 37914734 37914849 . - 1 Parent=GSCOCT00004957001 | |
| 29902 chr1 manual_curation gene 37919506 37920836 . - . ID=GSCOCG00004955001;Name=Cc01_g21640 | |
| 29903 chr1 manual_curation mRNA 37919506 37920836 . - . ID=GSCOCT00004955001;Parent=GSCOCG00004955001;Name=Cc01_g21640 | |
| 29904 chr1 manual_curation polypeptide 37920044 37920556 . - . ID=GSCOCP00004955001;Dbxref=InterPro:IPR008395,InterPro:IPR014002,PFAM:PF05641,SMART:SM00743,TAIR:AT1G06340.1,TAIR:AT1G09320.1,TAIR:AT1G26540.1,TrEMBL:A5BYW3,TrEMBL:B9RFL4,TrEMBL:F6I4U3;Derives_from=GSCOCT00004955001;Name=Cc01_g21640;Ontology_term=CC_evidence_code:ISS,GO:0003723,CC_EC_number:missing_EC_number,PRODUCT:Putative agenet domain-containing protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004955001~ Putative agenet domain-containing protein~ unknown_gene~ fragment;original_location=272845..273357;owner=coffea | |
| 29905 chr1 manual_curation exon 37919506 37920836 . - . Parent=GSCOCT00004955001 | |
| 29906 chr1 manual_curation CDS 37920044 37920556 . - 0 Parent=GSCOCT00004955001 | |
| 29907 chr1 manual_curation gene 37921801 37929995 . - . ID=GSCOCG00004954001;Name=Cc01_g21650 | |
| 29908 chr1 manual_curation mRNA 37921801 37929995 . - . ID=GSCOCT00004954001;Parent=GSCOCG00004954001;Name=Cc01_g21650 | |
| 29909 chr1 manual_curation polypeptide 37922695 37929995 . - . ID=GSCOCP00004954001;Dbxref=InterPro:IPR007930,InterPro:IPR008395,InterPro:IPR014002,PFAM:PF05266,PFAM:PF05641,SMART:SM00743,TAIR:AT1G09320.1,TAIR:AT1G11420.1,TAIR:AT1G26540.1,TrEMBL:B9GSW5,TrEMBL:B9RPH3,TrEMBL:D7U2L4;Derives_from=GSCOCT00004954001;Name=Cc01_g21650;Ontology_term=CC_evidence_code:ISS,GO:0003723,CC_EC_number:missing_EC_number,PRODUCT:Putative agenet domain-containing protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004954001~ Putative agenet domain-containing protein~ unknown_gene~ modules;original_location=join(263406..264005%2C264603..265007%2C266540..266992%2C267725..267839%2C267930..268141%2C269039..269135%2C269214..269543%2C269755..269910%2C270024..270706);owner=coffea | |
| 29910 chr1 manual_curation exon 37929396 37929995 . - . Parent=GSCOCT00004954001 | |
| 29911 chr1 manual_curation exon 37928394 37928798 . - . Parent=GSCOCT00004954001 | |
| 29912 chr1 manual_curation exon 37926409 37926861 . - . Parent=GSCOCT00004954001 | |
| 29913 chr1 manual_curation exon 37925562 37925676 . - . Parent=GSCOCT00004954001 | |
| 29914 chr1 manual_curation exon 37925260 37925471 . - . Parent=GSCOCT00004954001 | |
| 29915 chr1 manual_curation exon 37924266 37924362 . - . Parent=GSCOCT00004954001 | |
| 29916 chr1 manual_curation exon 37923858 37924187 . - . Parent=GSCOCT00004954001 | |
| 29917 chr1 manual_curation exon 37923491 37923646 . - . Parent=GSCOCT00004954001 | |
| 29918 chr1 manual_curation exon 37921801 37923377 . - . Parent=GSCOCT00004954001 | |
| 29919 chr1 manual_curation CDS 37929396 37929995 . - 0 Parent=GSCOCT00004954001 | |
| 29920 chr1 manual_curation CDS 37928394 37928798 . - 0 Parent=GSCOCT00004954001 | |
| 29921 chr1 manual_curation CDS 37926409 37926861 . - 0 Parent=GSCOCT00004954001 | |
| 29922 chr1 manual_curation CDS 37925562 37925676 . - 0 Parent=GSCOCT00004954001 | |
| 29923 chr1 manual_curation CDS 37925260 37925471 . - 1 Parent=GSCOCT00004954001 | |
| 29924 chr1 manual_curation CDS 37924266 37924362 . - 0 Parent=GSCOCT00004954001 | |
| 29925 chr1 manual_curation CDS 37923858 37924187 . - 1 Parent=GSCOCT00004954001 | |
| 29926 chr1 manual_curation CDS 37923491 37923646 . - 1 Parent=GSCOCT00004954001 | |
| 29927 chr1 manual_curation CDS 37922695 37923377 . - 1 Parent=GSCOCT00004954001 | |
| 29928 chr1 manual_curation gene 37934936 37937663 . + . ID=GSCOCG00004953001;Name=Cc01_g21660 | |
| 29929 chr1 manual_curation mRNA 37934936 37937663 . + . ID=GSCOCT00004953001;Parent=GSCOCG00004953001;Name=Cc01_g21660 | |
| 29930 chr1 manual_curation polypeptide 37935207 37937260 . + . ID=GSCOCP00004953001;Dbxref=InterPro:IPR001075,PFAM:PF01106,PRODOM:PD002830,SwissProt:Q84LK7,SwissProt:Q93W20,SwissProt:Q93W77,TAIR:AT4G01940.1,TAIR:AT4G25910.1,TAIR:AT5G49940.1,TrEMBL:B9RNA2,TrEMBL:D7U2L5,TrEMBL:G7KTN7;Derives_from=GSCOCT00004953001;Name=Cc01_g21660;Ontology_term=CC_evidence_code:ISS,GO:0005506,GO:0016226,GO:0051536,CC_EC_number:missing_EC_number,PRODUCT:NifU-like protein 1%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:NIFU1,CC_gene:NIFU2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004953001~ NifU-like protein 1%2C chloroplastic~ NIFU1~ fragment;original_location=complement(join(258014..258194%2C256494..256630%2C256141..256329));owner=coffea | |
| 29931 chr1 manual_curation exon 37937072 37937663 . + . Parent=GSCOCT00004953001 | |
| 29932 chr1 manual_curation exon 37936771 37936907 . + . Parent=GSCOCT00004953001 | |
| 29933 chr1 manual_curation exon 37934936 37935387 . + . Parent=GSCOCT00004953001 | |
| 29934 chr1 manual_curation CDS 37937072 37937260 . + 0 Parent=GSCOCT00004953001 | |
| 29935 chr1 manual_curation CDS 37936771 37936907 . + 1 Parent=GSCOCT00004953001 | |
| 29936 chr1 manual_curation CDS 37935207 37935387 . + 0 Parent=GSCOCT00004953001 | |
| 29937 chr1 manual_curation gene 37937830 37939461 . - . ID=GSCOCG00004952001;Name=Cc01_g21670 | |
| 29938 chr1 manual_curation mRNA 37937830 37939461 . - . ID=GSCOCT00004952001;Parent=GSCOCG00004952001;Name=Cc01_g21670 | |
| 29939 chr1 manual_curation polypeptide 37937830 37938934 . - . ID=GSCOCP00004952001;Dbxref=TAIR:AT4G01935.1,TrEMBL:B9I9F8,TrEMBL:B9RNA1,TrEMBL:F6HZC0;Derives_from=GSCOCT00004952001;Name=Cc01_g21670;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004952001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B Has 37 Blast hits to 37 proteins in 17 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 30%3B Viruses - 0%3B Other Eukaryotes - 7 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(254467..254601%2C254735..254850%2C254966..255154%2C255298..255349%2C255449..255571);owner=coffea | |
| 29940 chr1 manual_curation exon 37938800 37939461 . - . Parent=GSCOCT00004952001 | |
| 29941 chr1 manual_curation exon 37938551 37938666 . - . Parent=GSCOCT00004952001 | |
| 29942 chr1 manual_curation exon 37938247 37938435 . - . Parent=GSCOCT00004952001 | |
| 29943 chr1 manual_curation exon 37938052 37938103 . - . Parent=GSCOCT00004952001 | |
| 29944 chr1 manual_curation exon 37937830 37937952 . - . Parent=GSCOCT00004952001 | |
| 29945 chr1 manual_curation CDS 37938800 37938934 . - 0 Parent=GSCOCT00004952001 | |
| 29946 chr1 manual_curation CDS 37938551 37938666 . - 0 Parent=GSCOCT00004952001 | |
| 29947 chr1 manual_curation CDS 37938247 37938435 . - 2 Parent=GSCOCT00004952001 | |
| 29948 chr1 manual_curation CDS 37938052 37938103 . - 2 Parent=GSCOCT00004952001 | |
| 29949 chr1 manual_curation CDS 37937830 37937952 . - 0 Parent=GSCOCT00004952001 | |
| 29950 chr1 manual_curation gene 37940079 37945949 . - . ID=GSCOCG00004951001;Name=Cc01_g21680 | |
| 29951 chr1 manual_curation mRNA 37940079 37945949 . - . ID=GSCOCT00004951001;Parent=GSCOCG00004951001;Name=Cc01_g21680 | |
| 29952 chr1 manual_curation polypeptide 37940799 37945739 . - . ID=GSCOCP00004951001;Dbxref=InterPro:IPR001005,InterPro:IPR008468,InterPro:IPR009057,PFAM:PF05499,SMART:SM00717,SUPERFAMILY:SSF46689,SwissProt:O14308,SwissProt:Q9JI44,SwissProt:Q9NPF5,TAIR:AT2G47210.1,TrEMBL:B9I9F7,TrEMBL:B9RN98,TrEMBL:D7U2M3;Derives_from=GSCOCT00004951001;Name=Cc01_g21680;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0005634,GO:0016481,CC_EC_number:missing_EC_number,PRODUCT:Putative SWR1-complex protein 4,CC_functional_completeness:modules,CC_gene:DMAP1,CC_gene:Dmap1,CC_gene:swc4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004951001~ Putative SWR1-complex protein 4~ DMAP1~ modules;original_location=join(247662..247808%2C247940..248029%2C248580..248645%2C248722..248781%2C248889..248945%2C249555..249684%2C249817..249884%2C250049..250141%2C250275..250322%2C250403..250573%2C251015..251125%2C251590..251685%2C251976..252050%2C252178..252238%2C252391..252425%2C252522..252602);owner=coffea | |
| 29953 chr1 manual_curation exon 37940079 37940531 . - . Parent=GSCOCT00004951001 | |
| 29954 chr1 manual_curation exon 37945593 37945949 . - . Parent=GSCOCT00004951001 | |
| 29955 chr1 manual_curation exon 37945372 37945461 . - . Parent=GSCOCT00004951001 | |
| 29956 chr1 manual_curation exon 37944756 37944821 . - . Parent=GSCOCT00004951001 | |
| 29957 chr1 manual_curation exon 37944620 37944679 . - . Parent=GSCOCT00004951001 | |
| 29958 chr1 manual_curation exon 37944456 37944512 . - . Parent=GSCOCT00004951001 | |
| 29959 chr1 manual_curation exon 37943717 37943846 . - . Parent=GSCOCT00004951001 | |
| 29960 chr1 manual_curation exon 37943517 37943584 . - . Parent=GSCOCT00004951001 | |
| 29961 chr1 manual_curation exon 37943260 37943352 . - . Parent=GSCOCT00004951001 | |
| 29962 chr1 manual_curation exon 37943079 37943126 . - . Parent=GSCOCT00004951001 | |
| 29963 chr1 manual_curation exon 37942828 37942998 . - . Parent=GSCOCT00004951001 | |
| 29964 chr1 manual_curation exon 37942276 37942386 . - . Parent=GSCOCT00004951001 | |
| 29965 chr1 manual_curation exon 37941716 37941811 . - . Parent=GSCOCT00004951001 | |
| 29966 chr1 manual_curation exon 37941351 37941425 . - . Parent=GSCOCT00004951001 | |
| 29967 chr1 manual_curation exon 37941163 37941223 . - . Parent=GSCOCT00004951001 | |
| 29968 chr1 manual_curation exon 37940976 37941010 . - . Parent=GSCOCT00004951001 | |
| 29969 chr1 manual_curation exon 37940791 37940879 . - . Parent=GSCOCT00004951001 | |
| 29970 chr1 manual_curation CDS 37945593 37945739 . - 0 Parent=GSCOCT00004951001 | |
| 29971 chr1 manual_curation CDS 37945372 37945461 . - 0 Parent=GSCOCT00004951001 | |
| 29972 chr1 manual_curation CDS 37944756 37944821 . - 0 Parent=GSCOCT00004951001 | |
| 29973 chr1 manual_curation CDS 37944620 37944679 . - 0 Parent=GSCOCT00004951001 | |
| 29974 chr1 manual_curation CDS 37944456 37944512 . - 0 Parent=GSCOCT00004951001 | |
| 29975 chr1 manual_curation CDS 37943717 37943846 . - 0 Parent=GSCOCT00004951001 | |
| 29976 chr1 manual_curation CDS 37943517 37943584 . - 1 Parent=GSCOCT00004951001 | |
| 29977 chr1 manual_curation CDS 37943260 37943352 . - 0 Parent=GSCOCT00004951001 | |
| 29978 chr1 manual_curation CDS 37943079 37943126 . - 0 Parent=GSCOCT00004951001 | |
| 29979 chr1 manual_curation CDS 37942828 37942998 . - 0 Parent=GSCOCT00004951001 | |
| 29980 chr1 manual_curation CDS 37942276 37942386 . - 0 Parent=GSCOCT00004951001 | |
| 29981 chr1 manual_curation CDS 37941716 37941811 . - 0 Parent=GSCOCT00004951001 | |
| 29982 chr1 manual_curation CDS 37941351 37941425 . - 0 Parent=GSCOCT00004951001 | |
| 29983 chr1 manual_curation CDS 37941163 37941223 . - 0 Parent=GSCOCT00004951001 | |
| 29984 chr1 manual_curation CDS 37940976 37941010 . - 1 Parent=GSCOCT00004951001 | |
| 29985 chr1 manual_curation CDS 37940799 37940879 . - 0 Parent=GSCOCT00004951001 | |
| 29986 chr1 manual_curation gene 37946900 37949621 . + . ID=GSCOCG00004950001;Name=Cc01_g21690 | |
| 29987 chr1 manual_curation mRNA 37946900 37949621 . + . ID=GSCOCT00004950001;Parent=GSCOCG00004950001;Name=Cc01_g21690 | |
| 29988 chr1 manual_curation polypeptide 37947078 37948533 . + . ID=GSCOCP00004950001;Dbxref=InterPro:IPR005031,PFAM:PF03364,TAIR:AT4G01650.1,TAIR:AT5G08720.1,TrEMBL:B9GRV7,TrEMBL:B9I991,TrEMBL:F6HZE9;Derives_from=GSCOCT00004950001;Name=Cc01_g21690;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative CONTAINS InterPro DOMAIN/s,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004950001~ Putative CONTAINS InterPro DOMAIN/s: Streptomyces cyclase/dehydrase (InterPro:IPR005031)%3B BEST Arabidopsis thaliana protein match is: Polyketide cyclase / dehydrase and lipid transport protein (TAIR:AT4G01650.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ unknown_gene~ fragment;original_location=complement(join(245784..246323%2C245316..245483%2C244868..245077));owner=coffea | |
| 29989 chr1 manual_curation exon 37948324 37949621 . + . Parent=GSCOCT00004950001 | |
| 29990 chr1 manual_curation exon 37947918 37948085 . + . Parent=GSCOCT00004950001 | |
| 29991 chr1 manual_curation exon 37946900 37947617 . + . Parent=GSCOCT00004950001 | |
| 29992 chr1 manual_curation CDS 37948324 37948533 . + 0 Parent=GSCOCT00004950001 | |
| 29993 chr1 manual_curation CDS 37947918 37948085 . + 0 Parent=GSCOCT00004950001 | |
| 29994 chr1 manual_curation CDS 37947078 37947617 . + 0 Parent=GSCOCT00004950001 | |
| 29995 chr1 manual_curation gene 37949706 37950504 . + . ID=GSCOCG00004949001;Name=Cc01_g21700 | |
| 29996 chr1 manual_curation mRNA 37949706 37950504 . + . ID=GSCOCT00004949001;Parent=GSCOCG00004949001;Name=Cc01_g21700 | |
| 29997 chr1 manual_curation polypeptide 37950074 37950408 . + . ID=GSCOCP00004949001;Derives_from=GSCOCT00004949001;Name=Cc01_g21700;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004949001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(243146..243327%2C242993..243002));owner=coffea | |
| 29998 chr1 manual_curation exon 37949706 37949909 . + . Parent=GSCOCT00004949001 | |
| 29999 chr1 manual_curation exon 37950399 37950504 . + . Parent=GSCOCT00004949001 | |
| 30000 chr1 manual_curation exon 37950005 37950255 . + . Parent=GSCOCT00004949001 | |
| 30001 chr1 manual_curation CDS 37950399 37950408 . + 2 Parent=GSCOCT00004949001 | |
| 30002 chr1 manual_curation CDS 37950074 37950255 . + 0 Parent=GSCOCT00004949001 | |
| 30003 chr1 manual_curation gene 37950560 37971213 . - . ID=GSCOCG00004948001;Name=Cc01_g21710 | |
| 30004 chr1 manual_curation mRNA 37950560 37971213 . - . ID=GSCOCT00004948001;Parent=GSCOCG00004948001;Name=Cc01_g21710 | |
| 30005 chr1 manual_curation polypeptide 37951208 37970818 . - . ID=GSCOCP00004948001;Dbxref=SwissProt:Q6DIR8,SwissProt:Q8JHZ8,SwissProt:Q9ULE6,TAIR:AT3G62010.1,TrEMBL:B9RN01,TrEMBL:D7U2V9,TrEMBL:I1NBK7;Derives_from=GSCOCT00004948001;Name=Cc01_g21710;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Paladin,CC_functional_completeness:complete,CC_gene:PALD,CC_gene:pald;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004948001~ Putative Paladin~ PALD~ complete;original_location=join(222583..222744%2C226814..226945%2C227934..228005%2C228745..228815%2C228928..229027%2C229126..229224%2C229997..230126%2C230668..230801%2C230890..230949%2C231341..231576%2C233525..233954%2C235963..236286%2C236470..237066%2C237157..237330%2C238805..239035%2C239144..239427%2C240811..241104%2C241756..241878%2C242058..242193);owner=coffea | |
| 30006 chr1 manual_curation exon 37970657 37971213 . - . Parent=GSCOCT00004948001 | |
| 30007 chr1 manual_curation exon 37966456 37966587 . - . Parent=GSCOCT00004948001 | |
| 30008 chr1 manual_curation exon 37965396 37965467 . - . Parent=GSCOCT00004948001 | |
| 30009 chr1 manual_curation exon 37964586 37964656 . - . Parent=GSCOCT00004948001 | |
| 30010 chr1 manual_curation exon 37964374 37964473 . - . Parent=GSCOCT00004948001 | |
| 30011 chr1 manual_curation exon 37964177 37964275 . - . Parent=GSCOCT00004948001 | |
| 30012 chr1 manual_curation exon 37963275 37963404 . - . Parent=GSCOCT00004948001 | |
| 30013 chr1 manual_curation exon 37962600 37962733 . - . Parent=GSCOCT00004948001 | |
| 30014 chr1 manual_curation exon 37962452 37962511 . - . Parent=GSCOCT00004948001 | |
| 30015 chr1 manual_curation exon 37961825 37962060 . - . Parent=GSCOCT00004948001 | |
| 30016 chr1 manual_curation exon 37959447 37959876 . - . Parent=GSCOCT00004948001 | |
| 30017 chr1 manual_curation exon 37957115 37957438 . - . Parent=GSCOCT00004948001 | |
| 30018 chr1 manual_curation exon 37956335 37956931 . - . Parent=GSCOCT00004948001 | |
| 30019 chr1 manual_curation exon 37956071 37956244 . - . Parent=GSCOCT00004948001 | |
| 30020 chr1 manual_curation exon 37954366 37954596 . - . Parent=GSCOCT00004948001 | |
| 30021 chr1 manual_curation exon 37953974 37954257 . - . Parent=GSCOCT00004948001 | |
| 30022 chr1 manual_curation exon 37952297 37952590 . - . Parent=GSCOCT00004948001 | |
| 30023 chr1 manual_curation exon 37951523 37951645 . - . Parent=GSCOCT00004948001 | |
| 30024 chr1 manual_curation exon 37950560 37951343 . - . Parent=GSCOCT00004948001 | |
| 30025 chr1 manual_curation CDS 37970657 37970818 . - 0 Parent=GSCOCT00004948001 | |
| 30026 chr1 manual_curation CDS 37966456 37966587 . - 0 Parent=GSCOCT00004948001 | |
| 30027 chr1 manual_curation CDS 37965396 37965467 . - 0 Parent=GSCOCT00004948001 | |
| 30028 chr1 manual_curation CDS 37964586 37964656 . - 0 Parent=GSCOCT00004948001 | |
| 30029 chr1 manual_curation CDS 37964374 37964473 . - 2 Parent=GSCOCT00004948001 | |
| 30030 chr1 manual_curation CDS 37964177 37964275 . - 0 Parent=GSCOCT00004948001 | |
| 30031 chr1 manual_curation CDS 37963275 37963404 . - 0 Parent=GSCOCT00004948001 | |
| 30032 chr1 manual_curation CDS 37962600 37962733 . - 1 Parent=GSCOCT00004948001 | |
| 30033 chr1 manual_curation CDS 37962452 37962511 . - 0 Parent=GSCOCT00004948001 | |
| 30034 chr1 manual_curation CDS 37961825 37962060 . - 0 Parent=GSCOCT00004948001 | |
| 30035 chr1 manual_curation CDS 37959447 37959876 . - 2 Parent=GSCOCT00004948001 | |
| 30036 chr1 manual_curation CDS 37957115 37957438 . - 0 Parent=GSCOCT00004948001 | |
| 30037 chr1 manual_curation CDS 37956335 37956931 . - 0 Parent=GSCOCT00004948001 | |
| 30038 chr1 manual_curation CDS 37956071 37956244 . - 0 Parent=GSCOCT00004948001 | |
| 30039 chr1 manual_curation CDS 37954366 37954596 . - 0 Parent=GSCOCT00004948001 | |
| 30040 chr1 manual_curation CDS 37953974 37954257 . - 0 Parent=GSCOCT00004948001 | |
| 30041 chr1 manual_curation CDS 37952297 37952590 . - 2 Parent=GSCOCT00004948001 | |
| 30042 chr1 manual_curation CDS 37951523 37951645 . - 2 Parent=GSCOCT00004948001 | |
| 30043 chr1 manual_curation CDS 37951208 37951343 . - 2 Parent=GSCOCT00004948001 | |
| 30044 chr1 manual_curation gene 37972883 37977096 . + . ID=GSCOCG00004947001;Name=Cc01_g21720 | |
| 30045 chr1 manual_curation mRNA 37972883 37977096 . + . ID=GSCOCT00004947001;Parent=GSCOCG00004947001;Name=Cc01_g21720 | |
| 30046 chr1 manual_curation polypeptide 37972883 37977096 . + . ID=GSCOCP00004947001;Dbxref=InterPro:IPR004147,InterPro:IPR011009,PFAM:PF03109,SUPERFAMILY:SSF56112,SwissProt:Q29RI0,SwissProt:Q5BJQ0,SwissProt:Q60936,TAIR:AT3G07700.3,TAIR:AT4G01660.1,TAIR:AT5G64940.1,TrEMBL:B9RN20,TrEMBL:D7U2S2,TrEMBL:I1JB94;Derives_from=GSCOCT00004947001;Name=Cc01_g21720;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:ABC transporter 1,CC_functional_completeness:fragment,CC_gene:ADCK3,CC_gene:Adck3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004947001~ ABC transporter 1~ ADCK3~ fragment;original_location=complement(join(219941..220518%2C219482..219707%2C218500..218652%2C217581..217739%2C216710..216869%2C216305..216471));owner=coffea | |
| 30047 chr1 manual_curation exon 37976930 37977096 . + . Parent=GSCOCT00004947001 | |
| 30048 chr1 manual_curation exon 37976532 37976691 . + . Parent=GSCOCT00004947001 | |
| 30049 chr1 manual_curation exon 37975662 37975820 . + . Parent=GSCOCT00004947001 | |
| 30050 chr1 manual_curation exon 37974749 37974901 . + . Parent=GSCOCT00004947001 | |
| 30051 chr1 manual_curation exon 37973694 37973919 . + . Parent=GSCOCT00004947001 | |
| 30052 chr1 manual_curation exon 37972883 37973460 . + . Parent=GSCOCT00004947001 | |
| 30053 chr1 manual_curation CDS 37976930 37977096 . + 1 Parent=GSCOCT00004947001 | |
| 30054 chr1 manual_curation CDS 37976532 37976691 . + 0 Parent=GSCOCT00004947001 | |
| 30055 chr1 manual_curation CDS 37975662 37975820 . + 0 Parent=GSCOCT00004947001 | |
| 30056 chr1 manual_curation CDS 37974749 37974901 . + 0 Parent=GSCOCT00004947001 | |
| 30057 chr1 manual_curation CDS 37973694 37973919 . + 2 Parent=GSCOCT00004947001 | |
| 30058 chr1 manual_curation CDS 37972883 37973460 . + 0 Parent=GSCOCT00004947001 | |
| 30059 chr1 manual_curation gene 37979289 37980360 . + . ID=GSCOCG00004945001;Name=Cc01_g21730 | |
| 30060 chr1 manual_curation mRNA 37979289 37980360 . + . ID=GSCOCT00004945001;Parent=GSCOCG00004945001;Name=Cc01_g21730 | |
| 30061 chr1 manual_curation polypeptide 37979289 37980181 . + . ID=GSCOCP00004945001;Dbxref=SwissProt:Q5BJQ0,SwissProt:Q60936,SwissProt:Q96D53,TAIR:AT4G01660.1,TrEMBL:B9GRW1,TrEMBL:B9RN20,TrEMBL:D7U2S2;Derives_from=GSCOCT00004945001;Name=Cc01_g21730;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized aarF domain-containing protein kinase 4,CC_functional_completeness:fragment,CC_gene:ADCK4,CC_gene:Adck3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004945001~ Putative Uncharacterized aarF domain-containing protein kinase 4~ ADCK4~ fragment;original_location=complement(join(213990..214112%2C213220..213618));owner=coffea | |
| 30062 chr1 manual_curation exon 37979783 37980360 . + . Parent=GSCOCT00004945001 | |
| 30063 chr1 manual_curation exon 37979289 37979411 . + . Parent=GSCOCT00004945001 | |
| 30064 chr1 manual_curation CDS 37979783 37980181 . + 0 Parent=GSCOCT00004945001 | |
| 30065 chr1 manual_curation CDS 37979289 37979411 . + 0 Parent=GSCOCT00004945001 | |
| 30066 chr1 manual_curation gene 37980752 37985500 . + . ID=GSCOCG00004944001;Name=Cc01_g21740 | |
| 30067 chr1 manual_curation mRNA 37980752 37985500 . + . ID=GSCOCT00004944001;Parent=GSCOCG00004944001;Name=Cc01_g21740 | |
| 30068 chr1 manual_curation polypeptide 37981022 37984782 . + . ID=GSCOCP00004944001;Dbxref=InterPro:IPR005024,PFAM:PF03357,SwissProt:Q5FW14,SwissProt:Q6PBQ2,SwissProt:Q7T0X5,TAIR:AT3G62080.2,TrEMBL:B9GTA9,TrEMBL:B9RN30,TrEMBL:D7U2T0;Derives_from=GSCOCT00004944001;Name=Cc01_g21740;Ontology_term=CC_evidence_code:ISS,GO:0015031,CC_EC_number:missing_EC_number,PRODUCT:Putative Charged multivesicular body protein 7,CC_functional_completeness:complete,CC_gene:chmp7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004944001~ Putative Charged multivesicular body protein 7~ chmp7~ complete;original_location=complement(join(212080..212379%2C211736..211927%2C211443..211625%2C211184..211314%2C209815..209983%2C209435..209564%2C208619..208881));owner=coffea | |
| 30069 chr1 manual_curation exon 37984520 37985500 . + . Parent=GSCOCT00004944001 | |
| 30070 chr1 manual_curation exon 37983837 37983966 . + . Parent=GSCOCT00004944001 | |
| 30071 chr1 manual_curation exon 37983418 37983586 . + . Parent=GSCOCT00004944001 | |
| 30072 chr1 manual_curation exon 37982087 37982217 . + . Parent=GSCOCT00004944001 | |
| 30073 chr1 manual_curation exon 37981776 37981958 . + . Parent=GSCOCT00004944001 | |
| 30074 chr1 manual_curation exon 37981474 37981665 . + . Parent=GSCOCT00004944001 | |
| 30075 chr1 manual_curation exon 37980752 37981321 . + . Parent=GSCOCT00004944001 | |
| 30076 chr1 manual_curation CDS 37984520 37984782 . + 1 Parent=GSCOCT00004944001 | |
| 30077 chr1 manual_curation CDS 37983837 37983966 . + 0 Parent=GSCOCT00004944001 | |
| 30078 chr1 manual_curation CDS 37983418 37983586 . + 2 Parent=GSCOCT00004944001 | |
| 30079 chr1 manual_curation CDS 37982087 37982217 . + 0 Parent=GSCOCT00004944001 | |
| 30080 chr1 manual_curation CDS 37981776 37981958 . + 0 Parent=GSCOCT00004944001 | |
| 30081 chr1 manual_curation CDS 37981474 37981665 . + 0 Parent=GSCOCT00004944001 | |
| 30082 chr1 manual_curation CDS 37981022 37981321 . + 0 Parent=GSCOCT00004944001 | |
| 30083 chr1 manual_curation gene 37985644 37992005 . - . ID=GSCOCG00004943001;Name=Cc01_g21750 | |
| 30084 chr1 manual_curation mRNA 37985644 37992005 . - . ID=GSCOCT00004943001;Parent=GSCOCG00004943001;Name=Cc01_g21750 | |
| 30085 chr1 manual_curation polypeptide 37986082 37992005 . - . ID=GSCOCP00004943001;Dbxref=TAIR:AT2G46980.2,TrEMBL:B9I9A0,TrEMBL:I1LAU3,TrEMBL:Q0WR66;Derives_from=GSCOCT00004943001;Name=Cc01_g21750;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Predicted protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004943001~ Putative Predicted protein~ unknown_gene~ complete;original_location=join(201396..201428%2C201663..203079%2C203128..203261%2C203360..203507%2C204463..204517%2C204626..204775%2C204850..204908%2C205736..205870%2C206262..206353%2C207248..207319);owner=coffea | |
| 30086 chr1 manual_curation exon 37991973 37992005 . - . Parent=GSCOCT00004943001 | |
| 30087 chr1 manual_curation exon 37990322 37991738 . - . Parent=GSCOCT00004943001 | |
| 30088 chr1 manual_curation exon 37990140 37990273 . - . Parent=GSCOCT00004943001 | |
| 30089 chr1 manual_curation exon 37989894 37990041 . - . Parent=GSCOCT00004943001 | |
| 30090 chr1 manual_curation exon 37988884 37988938 . - . Parent=GSCOCT00004943001 | |
| 30091 chr1 manual_curation exon 37988626 37988775 . - . Parent=GSCOCT00004943001 | |
| 30092 chr1 manual_curation exon 37988493 37988551 . - . Parent=GSCOCT00004943001 | |
| 30093 chr1 manual_curation exon 37987531 37987665 . - . Parent=GSCOCT00004943001 | |
| 30094 chr1 manual_curation exon 37987048 37987139 . - . Parent=GSCOCT00004943001 | |
| 30095 chr1 manual_curation exon 37985644 37986153 . - . Parent=GSCOCT00004943001 | |
| 30096 chr1 manual_curation CDS 37991973 37992005 . - 0 Parent=GSCOCT00004943001 | |
| 30097 chr1 manual_curation CDS 37990322 37991738 . - 0 Parent=GSCOCT00004943001 | |
| 30098 chr1 manual_curation CDS 37990140 37990273 . - 1 Parent=GSCOCT00004943001 | |
| 30099 chr1 manual_curation CDS 37989894 37990041 . - 0 Parent=GSCOCT00004943001 | |
| 30100 chr1 manual_curation CDS 37988884 37988938 . - 1 Parent=GSCOCT00004943001 | |
| 30101 chr1 manual_curation CDS 37988626 37988775 . - 2 Parent=GSCOCT00004943001 | |
| 30102 chr1 manual_curation CDS 37988493 37988551 . - 2 Parent=GSCOCT00004943001 | |
| 30103 chr1 manual_curation CDS 37987531 37987665 . - 1 Parent=GSCOCT00004943001 | |
| 30104 chr1 manual_curation CDS 37987048 37987139 . - 1 Parent=GSCOCT00004943001 | |
| 30105 chr1 manual_curation CDS 37986082 37986153 . - 0 Parent=GSCOCT00004943001 | |
| 30106 chr1 manual_curation gene 37995313 37999552 . + . ID=GSCOCG00004942001;Name=Cc01_g21760 | |
| 30107 chr1 manual_curation mRNA 37995313 37999552 . + . ID=GSCOCT00004942001;Parent=GSCOCG00004942001;Name=Cc01_g21760 | |
| 30108 chr1 manual_curation polypeptide 37995313 37999446 . + . ID=GSCOCP00004942001;Dbxref=InterPro:IPR002937,InterPro:IPR004572,PFAM:PF01593,SwissProt:O24163,SwissProt:P55826,SwissProt:Q9AR38,TAIR:AT4G01690.1,TAIR:AT5G14220.1,TIGRFAMs:TIGR00562,TrEMBL:D7U2T4,TrEMBL:Q9SAX9,TrEMBL:Q9SBI4;Derives_from=GSCOCT00004942001;Name=Cc01_g21760;Ontology_term=CC_evidence_code:ISS,GO:0004729,GO:0006779,GO:0055114,CC_EC_number:1.3.3.4,PRODUCT:Protoporphyrinogen oxidase%2C chloroplastic,CC_functional_completeness:modules,CC_gene:PPXI,CC_gene:PPOX,CC_gene:PPOX1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004942001~ Protoporphyrinogen oxidase%2C chloroplastic~ PPXI~ modules;original_location=complement(join(197159..198088%2C196637..196721%2C196029..196176%2C195854..195934%2C195463..195634%2C194776..194935%2C194517..194620%2C193955..194254));owner=coffea | |
| 30109 chr1 manual_curation exon 37999147 37999552 . + . Parent=GSCOCT00004942001 | |
| 30110 chr1 manual_curation exon 37998781 37998884 . + . Parent=GSCOCT00004942001 | |
| 30111 chr1 manual_curation exon 37998466 37998625 . + . Parent=GSCOCT00004942001 | |
| 30112 chr1 manual_curation exon 37997767 37997938 . + . Parent=GSCOCT00004942001 | |
| 30113 chr1 manual_curation exon 37997467 37997547 . + . Parent=GSCOCT00004942001 | |
| 30114 chr1 manual_curation exon 37997225 37997372 . + . Parent=GSCOCT00004942001 | |
| 30115 chr1 manual_curation exon 37996680 37996764 . + . Parent=GSCOCT00004942001 | |
| 30116 chr1 manual_curation exon 37995313 37996242 . + . Parent=GSCOCT00004942001 | |
| 30117 chr1 manual_curation CDS 37999147 37999446 . + 0 Parent=GSCOCT00004942001 | |
| 30118 chr1 manual_curation CDS 37998781 37998884 . + 1 Parent=GSCOCT00004942001 | |
| 30119 chr1 manual_curation CDS 37998466 37998625 . + 0 Parent=GSCOCT00004942001 | |
| 30120 chr1 manual_curation CDS 37997767 37997938 . + 2 Parent=GSCOCT00004942001 | |
| 30121 chr1 manual_curation CDS 37997467 37997547 . + 2 Parent=GSCOCT00004942001 | |
| 30122 chr1 manual_curation CDS 37997225 37997372 . + 1 Parent=GSCOCT00004942001 | |
| 30123 chr1 manual_curation CDS 37996680 37996764 . + 0 Parent=GSCOCT00004942001 | |
| 30124 chr1 manual_curation CDS 37995313 37996242 . + 0 Parent=GSCOCT00004942001 | |
| 30125 chr1 manual_curation gene 38002054 38005265 . + . ID=GSCOCG00004940001;Name=Cc01_g21770 | |
| 30126 chr1 manual_curation mRNA 38002054 38005265 . + . ID=GSCOCT00004940001;Parent=GSCOCG00004940001;Name=Cc01_g21770 | |
| 30127 chr1 manual_curation polypeptide 38002380 38005265 . + . ID=GSCOCP00004940001;Dbxref=InterPro:IPR001594,PFAM:PF01529,PROFILE:PS50216,SwissProt:Q6DR03,SwissProt:Q9LIE4,SwissProt:Q9M115,TAIR:AT2G33640.1,TAIR:AT3G22180.1,TAIR:AT4G01730.1,TrEMBL:B9I9A5,TrEMBL:B9TA62,TrEMBL:G7IBQ1;Derives_from=GSCOCT00004940001;Name=Cc01_g21770;Ontology_term=CC_evidence_code:ISS,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Probable S-acyltransferase At4g01730,CC_functional_completeness:complete,CC_gene:At4g01730,CC_gene:At3g22180,CC_gene:At2g33640;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004940001~ Probable S-acyltransferase At4g01730~ At4g01730~ complete;original_location=complement(join(190980..191021%2C190697..190810%2C190224..190577%2C189950..190018%2C189762..189833%2C189476..189604%2C189288..189368%2C188747..188917%2C188136..188648));owner=coffea | |
| 30128 chr1 manual_curation exon 38004753 38005265 . + . Parent=GSCOCT00004940001 | |
| 30129 chr1 manual_curation exon 38004484 38004654 . + . Parent=GSCOCT00004940001 | |
| 30130 chr1 manual_curation exon 38004033 38004113 . + . Parent=GSCOCT00004940001 | |
| 30131 chr1 manual_curation exon 38003797 38003925 . + . Parent=GSCOCT00004940001 | |
| 30132 chr1 manual_curation exon 38003568 38003639 . + . Parent=GSCOCT00004940001 | |
| 30133 chr1 manual_curation exon 38003383 38003451 . + . Parent=GSCOCT00004940001 | |
| 30134 chr1 manual_curation exon 38002824 38003177 . + . Parent=GSCOCT00004940001 | |
| 30135 chr1 manual_curation exon 38002591 38002704 . + . Parent=GSCOCT00004940001 | |
| 30136 chr1 manual_curation exon 38002054 38002421 . + . Parent=GSCOCT00004940001 | |
| 30137 chr1 manual_curation CDS 38004753 38005265 . + 0 Parent=GSCOCT00004940001 | |
| 30138 chr1 manual_curation CDS 38004484 38004654 . + 0 Parent=GSCOCT00004940001 | |
| 30139 chr1 manual_curation CDS 38004033 38004113 . + 0 Parent=GSCOCT00004940001 | |
| 30140 chr1 manual_curation CDS 38003797 38003925 . + 0 Parent=GSCOCT00004940001 | |
| 30141 chr1 manual_curation CDS 38003568 38003639 . + 0 Parent=GSCOCT00004940001 | |
| 30142 chr1 manual_curation CDS 38003383 38003451 . + 0 Parent=GSCOCT00004940001 | |
| 30143 chr1 manual_curation CDS 38002824 38003177 . + 0 Parent=GSCOCT00004940001 | |
| 30144 chr1 manual_curation CDS 38002591 38002704 . + 0 Parent=GSCOCT00004940001 | |
| 30145 chr1 manual_curation CDS 38002380 38002421 . + 0 Parent=GSCOCT00004940001 | |
| 30146 chr1 manual_curation gene 38005469 38016711 . - . ID=GSCOCG00004939001;Name=Cc01_g21780 | |
| 30147 chr1 manual_curation mRNA 38005469 38016711 . - . ID=GSCOCT00004939001;Parent=GSCOCG00004939001;Name=Cc01_g21780 | |
| 30148 chr1 manual_curation polypeptide 38005839 38016414 . - . ID=GSCOCP00004939001;Dbxref=GENE3D:G3DSA:1.10.3060.10,HAMAP:MF_01382,InterPro:IPR000185,InterPro:IPR011115,InterPro:IPR011116,InterPro:IPR011130,InterPro:IPR014018,InterPro:IPR020937,InterPro:IPR022491,PFAM:PF01043,PFAM:PF07516,PFAM:PF07517,PRINTS:PR00906,PROFILE:PS51196,PROSITE:PS01312,SUPERFAMILY:SSF81767,SUPERFAMILY:SSF81886,SwissProt:Q36795,SwissProt:Q41062,SwissProt:Q9SYI0,TAIR:AT1G21650.3,TAIR:AT4G01800.2,TIGRFAMs:TIGR00963,TrEMBL:B9I9A8,TrEMBL:F6HZF9,TrEMBL:I1LAT5;Derives_from=GSCOCT00004939001;Name=Cc01_g21780;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0005524,GO:0006605,GO:0006886,GO:0009898,GO:0015450,GO:0016020,GO:0016887,GO:0017038,GO:0043952,CC_EC_number:missing_EC_number,PRODUCT:Protein translocase subunit SecA%2C chloroplastic,CC_functional_completeness:complete,CC_gene:secA,CC_gene:SECA1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004939001~ Protein translocase subunit SecA%2C chloroplastic~ secA~ complete;original_location=join(176987..177430%2C177629..177701%2C177993..178199%2C178643..178695%2C178854..179033%2C179743..179961%2C182504..182617%2C182725..182838%2C182956..183123%2C183310..183485%2C184057..184123%2C184215..184361%2C184609..184704%2C185388..185456%2C185731..185832%2C185920..186171%2C186251..186318%2C186672..186789%2C187057..187296%2C187443..187562);owner=coffea | |
| 30149 chr1 manual_curation exon 38015971 38016711 . - . Parent=GSCOCT00004939001 | |
| 30150 chr1 manual_curation exon 38015700 38015772 . - . Parent=GSCOCT00004939001 | |
| 30151 chr1 manual_curation exon 38015202 38015408 . - . Parent=GSCOCT00004939001 | |
| 30152 chr1 manual_curation exon 38014706 38014758 . - . Parent=GSCOCT00004939001 | |
| 30153 chr1 manual_curation exon 38014368 38014547 . - . Parent=GSCOCT00004939001 | |
| 30154 chr1 manual_curation exon 38013440 38013658 . - . Parent=GSCOCT00004939001 | |
| 30155 chr1 manual_curation exon 38010784 38010897 . - . Parent=GSCOCT00004939001 | |
| 30156 chr1 manual_curation exon 38010563 38010676 . - . Parent=GSCOCT00004939001 | |
| 30157 chr1 manual_curation exon 38010278 38010445 . - . Parent=GSCOCT00004939001 | |
| 30158 chr1 manual_curation exon 38009916 38010091 . - . Parent=GSCOCT00004939001 | |
| 30159 chr1 manual_curation exon 38009278 38009344 . - . Parent=GSCOCT00004939001 | |
| 30160 chr1 manual_curation exon 38009040 38009186 . - . Parent=GSCOCT00004939001 | |
| 30161 chr1 manual_curation exon 38008697 38008792 . - . Parent=GSCOCT00004939001 | |
| 30162 chr1 manual_curation exon 38007945 38008013 . - . Parent=GSCOCT00004939001 | |
| 30163 chr1 manual_curation exon 38007569 38007670 . - . Parent=GSCOCT00004939001 | |
| 30164 chr1 manual_curation exon 38007230 38007481 . - . Parent=GSCOCT00004939001 | |
| 30165 chr1 manual_curation exon 38007083 38007150 . - . Parent=GSCOCT00004939001 | |
| 30166 chr1 manual_curation exon 38006612 38006729 . - . Parent=GSCOCT00004939001 | |
| 30167 chr1 manual_curation exon 38006105 38006344 . - . Parent=GSCOCT00004939001 | |
| 30168 chr1 manual_curation exon 38005469 38005958 . - . Parent=GSCOCT00004939001 | |
| 30169 chr1 manual_curation CDS 38015971 38016414 . - 0 Parent=GSCOCT00004939001 | |
| 30170 chr1 manual_curation CDS 38015700 38015772 . - 0 Parent=GSCOCT00004939001 | |
| 30171 chr1 manual_curation CDS 38015202 38015408 . - 1 Parent=GSCOCT00004939001 | |
| 30172 chr1 manual_curation CDS 38014706 38014758 . - 1 Parent=GSCOCT00004939001 | |
| 30173 chr1 manual_curation CDS 38014368 38014547 . - 0 Parent=GSCOCT00004939001 | |
| 30174 chr1 manual_curation CDS 38013440 38013658 . - 0 Parent=GSCOCT00004939001 | |
| 30175 chr1 manual_curation CDS 38010784 38010897 . - 0 Parent=GSCOCT00004939001 | |
| 30176 chr1 manual_curation CDS 38010563 38010676 . - 0 Parent=GSCOCT00004939001 | |
| 30177 chr1 manual_curation CDS 38010278 38010445 . - 0 Parent=GSCOCT00004939001 | |
| 30178 chr1 manual_curation CDS 38009916 38010091 . - 0 Parent=GSCOCT00004939001 | |
| 30179 chr1 manual_curation CDS 38009278 38009344 . - 2 Parent=GSCOCT00004939001 | |
| 30180 chr1 manual_curation CDS 38009040 38009186 . - 0 Parent=GSCOCT00004939001 | |
| 30181 chr1 manual_curation CDS 38008697 38008792 . - 0 Parent=GSCOCT00004939001 | |
| 30182 chr1 manual_curation CDS 38007945 38008013 . - 0 Parent=GSCOCT00004939001 | |
| 30183 chr1 manual_curation CDS 38007569 38007670 . - 0 Parent=GSCOCT00004939001 | |
| 30184 chr1 manual_curation CDS 38007230 38007481 . - 0 Parent=GSCOCT00004939001 | |
| 30185 chr1 manual_curation CDS 38007083 38007150 . - 0 Parent=GSCOCT00004939001 | |
| 30186 chr1 manual_curation CDS 38006612 38006729 . - 2 Parent=GSCOCT00004939001 | |
| 30187 chr1 manual_curation CDS 38006105 38006344 . - 0 Parent=GSCOCT00004939001 | |
| 30188 chr1 manual_curation CDS 38005839 38005958 . - 0 Parent=GSCOCT00004939001 | |
| 30189 chr1 manual_curation gene 38017429 38023267 . + . ID=GSCOCG00004938001;Name=Cc01_g21790 | |
| 30190 chr1 manual_curation mRNA 38017429 38023267 . + . ID=GSCOCT00004938001;Parent=GSCOCG00004938001;Name=Cc01_g21790 | |
| 30191 chr1 manual_curation polypeptide 38018370 38022931 . + . ID=GSCOCP00004938001;Dbxref=InterPro:IPR006895,InterPro:IPR006896,InterPro:IPR006900,InterPro:IPR012990,PFAM:PF04810,PFAM:PF04811,PFAM:PF04815,PFAM:PF08033,SUPERFAMILY:SSF81811,SUPERFAMILY:SSF82919,SwissProt:Q01405,SwissProt:Q05AS9,SwissProt:Q7SZE5,TAIR:AT2G21630.1,TAIR:AT4G01810.1,TAIR:AT4G14160.1,TrEMBL:B9GTA0,TrEMBL:D7U2U3,TrEMBL:I1NBI1;Derives_from=GSCOCT00004938001;Name=Cc01_g21790;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0006886,GO:0006888,GO:0008270,GO:0030127,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein transport protein Sec23A,CC_functional_completeness:modules,CC_gene:sec23a,CC_gene:Sec23a;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004938001~ Putative Protein transport protein Sec23A~ sec23a~ modules;original_location=complement(join(174540..175031%2C172355..174175%2C170947..171032%2C170833..170881%2C170745..170816%2C170470..170607));owner=coffea | |
| 30192 chr1 manual_curation exon 38017925 38018002 . + . Parent=GSCOCT00004938001 | |
| 30193 chr1 manual_curation exon 38017429 38017799 . + . Parent=GSCOCT00004938001 | |
| 30194 chr1 manual_curation exon 38022794 38023267 . + . Parent=GSCOCT00004938001 | |
| 30195 chr1 manual_curation exon 38022585 38022656 . + . Parent=GSCOCT00004938001 | |
| 30196 chr1 manual_curation exon 38022520 38022568 . + . Parent=GSCOCT00004938001 | |
| 30197 chr1 manual_curation exon 38022369 38022454 . + . Parent=GSCOCT00004938001 | |
| 30198 chr1 manual_curation exon 38019226 38021046 . + . Parent=GSCOCT00004938001 | |
| 30199 chr1 manual_curation exon 38018233 38018861 . + . Parent=GSCOCT00004938001 | |
| 30200 chr1 manual_curation CDS 38022794 38022931 . + 0 Parent=GSCOCT00004938001 | |
| 30201 chr1 manual_curation CDS 38022585 38022656 . + 0 Parent=GSCOCT00004938001 | |
| 30202 chr1 manual_curation CDS 38022520 38022568 . + 2 Parent=GSCOCT00004938001 | |
| 30203 chr1 manual_curation CDS 38022369 38022454 . + 0 Parent=GSCOCT00004938001 | |
| 30204 chr1 manual_curation CDS 38019226 38021046 . + 0 Parent=GSCOCT00004938001 | |
| 30205 chr1 manual_curation CDS 38018370 38018861 . + 0 Parent=GSCOCT00004938001 | |
| 30206 chr1 manual_curation gene 38025952 38030227 . + . ID=GSCOCG00004937001;Name=Cc01_g21800 | |
| 30207 chr1 manual_curation mRNA 38025952 38030227 . + . ID=GSCOCT00004937001;Parent=GSCOCG00004937001;Name=Cc01_g21800 | |
| 30208 chr1 manual_curation polypeptide 38026086 38030227 . + . ID=GSCOCP00004937001;Dbxref=InterPro:IPR019331,PFAM:PF10187,TAIR:AT3G62140.1,TrEMBL:F6HZG1,TrEMBL:I1JQX0,TrEMBL:I1NBI0;Derives_from=GSCOCT00004937001;Name=Cc01_g21800;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:CONTAINS InterPro DOMAIN/s,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004937001~ CONTAINS InterPro DOMAIN/s: NEFA-interacting nuclear protein NIP30%2C N-terminal (InterPro:IPR019331)%3B Has 398 Blast hits to 395 proteins in 139 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 193%3B Fungi - 83%3B Plants - 36%3B Viruses - 0%3B Other Eukaryotes - 80 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(167253..167315%2C167051..167125%2C166477..166534%2C166124..166179%2C164805..164867%2C164236..164301%2C163174..163410));owner=coffea | |
| 30209 chr1 manual_curation exon 38025952 38026010 . + . Parent=GSCOCT00004937001 | |
| 30210 chr1 manual_curation exon 38029991 38030227 . + . Parent=GSCOCT00004937001 | |
| 30211 chr1 manual_curation exon 38029100 38029165 . + . Parent=GSCOCT00004937001 | |
| 30212 chr1 manual_curation exon 38028534 38028596 . + . Parent=GSCOCT00004937001 | |
| 30213 chr1 manual_curation exon 38027222 38027277 . + . Parent=GSCOCT00004937001 | |
| 30214 chr1 manual_curation exon 38026867 38026924 . + . Parent=GSCOCT00004937001 | |
| 30215 chr1 manual_curation exon 38026276 38026350 . + . Parent=GSCOCT00004937001 | |
| 30216 chr1 manual_curation exon 38026073 38026148 . + . Parent=GSCOCT00004937001 | |
| 30217 chr1 manual_curation CDS 38029991 38030227 . + 0 Parent=GSCOCT00004937001 | |
| 30218 chr1 manual_curation CDS 38029100 38029165 . + 0 Parent=GSCOCT00004937001 | |
| 30219 chr1 manual_curation CDS 38028534 38028596 . + 0 Parent=GSCOCT00004937001 | |
| 30220 chr1 manual_curation CDS 38027222 38027277 . + 1 Parent=GSCOCT00004937001 | |
| 30221 chr1 manual_curation CDS 38026867 38026924 . + 0 Parent=GSCOCT00004937001 | |
| 30222 chr1 manual_curation CDS 38026276 38026350 . + 0 Parent=GSCOCT00004937001 | |
| 30223 chr1 manual_curation CDS 38026086 38026148 . + 0 Parent=GSCOCT00004937001 | |
| 30224 chr1 manual_curation gene 38031776 38038860 . - . ID=GSCOCG00004935001;Name=Cc01_g21810 | |
| 30225 chr1 manual_curation mRNA 38031776 38038860 . - . ID=GSCOCT00004935001;Parent=GSCOCG00004935001;Name=Cc01_g21810 | |
| 30226 chr1 manual_curation polypeptide 38032113 38037832 . - . ID=GSCOCP00004935001;Dbxref=InterPro:IPR001140,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR011527,InterPro:IPR017871,InterPro:IPR017940,PFAM:PF00005,PFAM:PF00664,PROFILE:PS50893,PROFILE:PS50929,PROSITE:PS00211,SMART:SM00382,SUPERFAMILY:SSF90123,SwissProt:O80725,SwissProt:Q9FWX7,SwissProt:Q9M1Q9,TAIR:AT1G02520.1,TAIR:AT2G47000.1,TAIR:AT3G62150.1,TrEMBL:A5BEI9,TrEMBL:B9I9B8,TrEMBL:F6HZG2;Derives_from=GSCOCT00004935001;Name=Cc01_g21810;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0006810,GO:0016021,GO:0016887,GO:0017111,GO:0055085,CC_EC_number:3.6.3.44,CC_EC_number:3.6.3.44,PRODUCT:ABC transporter B family member 11,CC_functional_completeness:complete,CC_gene:ABCB11,CC_gene:ABCB4,CC_gene:ABCB21;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004935001~ ABC transporter B family member 11~ ABCB11~ complete;original_location=join(155569..155931%2C156252..156306%2C156530..156705%2C156811..157032%2C157179..157417%2C157565..158090%2C158256..158529%2C158660..159543%2C159743..160009%2C160141..160404%2C160495..160788%2C160902..161288);owner=coffea | |
| 30227 chr1 manual_curation exon 38038494 38038860 . - . Parent=GSCOCT00004935001 | |
| 30228 chr1 manual_curation exon 38037470 38038019 . - . Parent=GSCOCT00004935001 | |
| 30229 chr1 manual_curation exon 38037095 38037149 . - . Parent=GSCOCT00004935001 | |
| 30230 chr1 manual_curation exon 38036696 38036871 . - . Parent=GSCOCT00004935001 | |
| 30231 chr1 manual_curation exon 38036369 38036590 . - . Parent=GSCOCT00004935001 | |
| 30232 chr1 manual_curation exon 38035984 38036222 . - . Parent=GSCOCT00004935001 | |
| 30233 chr1 manual_curation exon 38035311 38035836 . - . Parent=GSCOCT00004935001 | |
| 30234 chr1 manual_curation exon 38034872 38035145 . - . Parent=GSCOCT00004935001 | |
| 30235 chr1 manual_curation exon 38033858 38034741 . - . Parent=GSCOCT00004935001 | |
| 30236 chr1 manual_curation exon 38033392 38033658 . - . Parent=GSCOCT00004935001 | |
| 30237 chr1 manual_curation exon 38032997 38033260 . - . Parent=GSCOCT00004935001 | |
| 30238 chr1 manual_curation exon 38032613 38032906 . - . Parent=GSCOCT00004935001 | |
| 30239 chr1 manual_curation exon 38031776 38032499 . - . Parent=GSCOCT00004935001 | |
| 30240 chr1 manual_curation CDS 38037470 38037832 . - 0 Parent=GSCOCT00004935001 | |
| 30241 chr1 manual_curation CDS 38037095 38037149 . - 0 Parent=GSCOCT00004935001 | |
| 30242 chr1 manual_curation CDS 38036696 38036871 . - 1 Parent=GSCOCT00004935001 | |
| 30243 chr1 manual_curation CDS 38036369 38036590 . - 0 Parent=GSCOCT00004935001 | |
| 30244 chr1 manual_curation CDS 38035984 38036222 . - 0 Parent=GSCOCT00004935001 | |
| 30245 chr1 manual_curation CDS 38035311 38035836 . - 2 Parent=GSCOCT00004935001 | |
| 30246 chr1 manual_curation CDS 38034872 38035145 . - 0 Parent=GSCOCT00004935001 | |
| 30247 chr1 manual_curation CDS 38033858 38034741 . - 1 Parent=GSCOCT00004935001 | |
| 30248 chr1 manual_curation CDS 38033392 38033658 . - 0 Parent=GSCOCT00004935001 | |
| 30249 chr1 manual_curation CDS 38032997 38033260 . - 0 Parent=GSCOCT00004935001 | |
| 30250 chr1 manual_curation CDS 38032613 38032906 . - 0 Parent=GSCOCT00004935001 | |
| 30251 chr1 manual_curation CDS 38032113 38032499 . - 0 Parent=GSCOCT00004935001 | |
| 30252 chr1 manual_curation gene 38044949 38046658 . - . ID=GSCOCG00004934001;Name=Cc01_g21820 | |
| 30253 chr1 manual_curation mRNA 38044949 38046658 . - . ID=GSCOCT00004934001;Parent=GSCOCG00004934001;Name=Cc01_g21820 | |
| 30254 chr1 manual_curation polypeptide 38044949 38046658 . - . ID=GSCOCP00004934001;Dbxref=GENE3D:G3DSA:1.20.140.40,GENE3D:G3DSA:2.160.20.10,InterPro:IPR000070,InterPro:IPR006501,InterPro:IPR011050,InterPro:IPR012334,InterPro:IPR018040,PFAM:PF01095,PFAM:PF04043,PROSITE:PS00503,SMART:SM00856,SUPERFAMILY:SSF101148,SUPERFAMILY:SSF51126,SwissProt:O80722,SwissProt:Q5MFV6,SwissProt:Q5MFV8,TAIR:AT2G47030.1,TAIR:AT2G47040.1,TAIR:AT3G62170.1,TIGRFAMs:TIGR01614,TrEMBL:A5ATJ7,TrEMBL:F6HE41,TrEMBL:F6HZG5;Derives_from=GSCOCT00004934001;Name=Cc01_g21820;Ontology_term=CC_evidence_code:ISS,GO:0004857,GO:0005618,GO:0030599,GO:0042545,CC_EC_number:3.1.1.11,PRODUCT:Putative Pectinesterase 4,CC_functional_completeness:complete,CC_gene:PME4,CC_gene:VGDH2,CC_gene:PME5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004934001~ Putative Pectinesterase 4~ PME4~ complete;original_location=146743..148452;owner=coffea | |
| 30255 chr1 manual_curation exon 38044949 38046658 . - . Parent=GSCOCT00004934001 | |
| 30256 chr1 manual_curation CDS 38044949 38046658 . - 0 Parent=GSCOCT00004934001 | |
| 30257 chr1 manual_curation gene 38050272 38053650 . + . ID=GSCOCG00004933001;Name=Cc01_g21830 | |
| 30258 chr1 manual_curation mRNA 38050272 38053650 . + . ID=GSCOCT00004933001;Parent=GSCOCG00004933001;Name=Cc01_g21830 | |
| 30259 chr1 manual_curation polypeptide 38050338 38052588 . + . ID=GSCOCP00004933001;Dbxref=InterPro:IPR001623,PFAM:PF00226,PROFILE:PS50076,SMART:SM00271,SUPERFAMILY:SSF46565,TAIR:AT3G62190.1,TrEMBL:A4PU34,TrEMBL:C6T4E2,TrEMBL:Q9M1Q5;Derives_from=GSCOCT00004933001;Name=Cc01_g21830;Ontology_term=CC_evidence_code:ISS,GO:0031072,CC_EC_number:missing_EC_number,PRODUCT:Chaperone DnaJ-domain superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004933001~ Chaperone DnaJ-domain superfamily protein~ unknown_gene~ complete;original_location=complement(join(142998..143063%2C142229..142321%2C142009..142039%2C140960..141092%2C140813..140867));owner=coffea | |
| 30260 chr1 manual_curation exon 38052534 38053650 . + . Parent=GSCOCT00004933001 | |
| 30261 chr1 manual_curation exon 38052309 38052441 . + . Parent=GSCOCT00004933001 | |
| 30262 chr1 manual_curation exon 38051362 38051392 . + . Parent=GSCOCT00004933001 | |
| 30263 chr1 manual_curation exon 38051080 38051172 . + . Parent=GSCOCT00004933001 | |
| 30264 chr1 manual_curation exon 38050272 38050403 . + . Parent=GSCOCT00004933001 | |
| 30265 chr1 manual_curation CDS 38052534 38052588 . + 2 Parent=GSCOCT00004933001 | |
| 30266 chr1 manual_curation CDS 38052309 38052441 . + 1 Parent=GSCOCT00004933001 | |
| 30267 chr1 manual_curation CDS 38051362 38051392 . + 0 Parent=GSCOCT00004933001 | |
| 30268 chr1 manual_curation CDS 38051080 38051172 . + 0 Parent=GSCOCT00004933001 | |
| 30269 chr1 manual_curation CDS 38050338 38050403 . + 0 Parent=GSCOCT00004933001 | |
| 30270 chr1 manual_curation gene 38054029 38057399 . - . ID=GSCOCG00004932001;Name=Cc01_g21840 | |
| 30271 chr1 manual_curation mRNA 38054029 38057399 . - . ID=GSCOCT00004932001;Parent=GSCOCG00004932001;Name=Cc01_g21840 | |
| 30272 chr1 manual_curation polypeptide 38054951 38057066 . - . ID=GSCOCP00004932001;Dbxref=InterPro:IPR021139,PFAM:PF01936,SwissProt:E1BP74,SwissProt:Q8BJ34,SwissProt:Q9Y4F3,TAIR:AT3G62200.1,TAIR:AT3G62210.1,TAIR:AT5G61190.1,TrEMBL:B9RN60,TrEMBL:D7LSV0,TrEMBL:F6HZE4;Derives_from=GSCOCT00004932001;Name=Cc01_g21840;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative endonuclease or glycosyl hydrolase,CC_functional_completeness:fragment,CC_gene:KIAA0430,CC_gene:MARF1,CC_gene:Marf1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004932001~ Putative endonuclease or glycosyl hydrolase~ KIAA0430~ fragment;original_location=join(136335..136605%2C136849..137364%2C137510..138191%2C138288..138450);owner=coffea | |
| 30273 chr1 manual_curation exon 38056796 38057399 . - . Parent=GSCOCT00004932001 | |
| 30274 chr1 manual_curation exon 38056037 38056552 . - . Parent=GSCOCT00004932001 | |
| 30275 chr1 manual_curation exon 38055210 38055891 . - . Parent=GSCOCT00004932001 | |
| 30276 chr1 manual_curation exon 38054029 38055113 . - . Parent=GSCOCT00004932001 | |
| 30277 chr1 manual_curation CDS 38056796 38057066 . - 0 Parent=GSCOCT00004932001 | |
| 30278 chr1 manual_curation CDS 38056037 38056552 . - 1 Parent=GSCOCT00004932001 | |
| 30279 chr1 manual_curation CDS 38055210 38055891 . - 1 Parent=GSCOCT00004932001 | |
| 30280 chr1 manual_curation CDS 38054951 38055113 . - 2 Parent=GSCOCT00004932001 | |
| 30281 chr1 manual_curation gene 38057620 38062250 . - . ID=GSCOCG00004931001;Name=Cc01_g21850 | |
| 30282 chr1 manual_curation mRNA 38057620 38062250 . - . ID=GSCOCT00004931001;Parent=GSCOCG00004931001;Name=Cc01_g21850 | |
| 30283 chr1 manual_curation polypeptide 38058006 38061001 . - . ID=GSCOCP00004931001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR020635,PFAM:PF07714,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:B9DFG5,SwissProt:O80719,SwissProt:Q41328,TAIR:AT1G48210.1,TAIR:AT2G47060.4,TAIR:AT3G62220.1,TrEMBL:B9RN61,TrEMBL:G7IBS1,TrEMBL:I1JBB6;Derives_from=GSCOCT00004931001;Name=Cc01_g21850;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Pto-interacting protein 1,CC_functional_completeness:complete,CC_gene:PTI1,CC_gene:At2g47060,CC_gene:PTI13;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004931001~ Pto-interacting protein 1~ PTI1~ complete;original_location=join(132400..132484%2C132845..133092%2C133175..133301%2C133862..134135%2C134582..134714%2C134814..134900%2C135264..135395);owner=coffea | |
| 30284 chr1 manual_curation exon 38061855 38062250 . - . Parent=GSCOCT00004931001 | |
| 30285 chr1 manual_curation exon 38060917 38061047 . - . Parent=GSCOCT00004931001 | |
| 30286 chr1 manual_curation exon 38060309 38060556 . - . Parent=GSCOCT00004931001 | |
| 30287 chr1 manual_curation exon 38060100 38060226 . - . Parent=GSCOCT00004931001 | |
| 30288 chr1 manual_curation exon 38059266 38059539 . - . Parent=GSCOCT00004931001 | |
| 30289 chr1 manual_curation exon 38058687 38058819 . - . Parent=GSCOCT00004931001 | |
| 30290 chr1 manual_curation exon 38058501 38058587 . - . Parent=GSCOCT00004931001 | |
| 30291 chr1 manual_curation exon 38057620 38058137 . - . Parent=GSCOCT00004931001 | |
| 30292 chr1 manual_curation CDS 38060917 38061001 . - 0 Parent=GSCOCT00004931001 | |
| 30293 chr1 manual_curation CDS 38060309 38060556 . - 1 Parent=GSCOCT00004931001 | |
| 30294 chr1 manual_curation CDS 38060100 38060226 . - 0 Parent=GSCOCT00004931001 | |
| 30295 chr1 manual_curation CDS 38059266 38059539 . - 1 Parent=GSCOCT00004931001 | |
| 30296 chr1 manual_curation CDS 38058687 38058819 . - 2 Parent=GSCOCT00004931001 | |
| 30297 chr1 manual_curation CDS 38058501 38058587 . - 0 Parent=GSCOCT00004931001 | |
| 30298 chr1 manual_curation CDS 38058006 38058137 . - 0 Parent=GSCOCT00004931001 | |
| 30299 chr1 manual_curation gene 38083570 38084584 . + . ID=GSCOCG00004928001;Name=Cc01_g21860 | |
| 30300 chr1 manual_curation mRNA 38083570 38084584 . + . ID=GSCOCT00004928001;Parent=GSCOCG00004928001;Name=Cc01_g21860 | |
| 30301 chr1 manual_curation polypeptide 38083570 38084584 . + . ID=GSCOCP00004928001;Dbxref=InterPro:IPR001650,PFAM:PF00271,SwissProt:Q6ATJ8,SwissProt:Q9SW44,TAIR:AT4G34910.1,TrEMBL:A5B2H1,TrEMBL:F6HRY2,TrEMBL:F6I7I9;Derives_from=GSCOCT00004928001;Name=Cc01_g21860;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0004386,GO:0005524,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:Os03g0728800,CC_gene:RH16;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004928001~ Hypothetical protein~ Os03g0728800~ missing_functional_completeness;original_location=complement(join(109754..109831%2C109605..109700%2C108817..109143));owner=coffea | |
| 30302 chr1 manual_curation exon 38084258 38084584 . + . Parent=GSCOCT00004928001 | |
| 30303 chr1 manual_curation exon 38083701 38083796 . + . Parent=GSCOCT00004928001 | |
| 30304 chr1 manual_curation exon 38083570 38083647 . + . Parent=GSCOCT00004928001 | |
| 30305 chr1 manual_curation CDS 38084258 38084584 . + 0 Parent=GSCOCT00004928001 | |
| 30306 chr1 manual_curation CDS 38083701 38083796 . + 0 Parent=GSCOCT00004928001 | |
| 30307 chr1 manual_curation CDS 38083570 38083647 . + 0 Parent=GSCOCT00004928001 | |
| 30308 chr1 manual_curation gene 38088155 38095024 . + . ID=GSCOCG00004926001;Name=Cc01_g21870 | |
| 30309 chr1 manual_curation mRNA 38088155 38095024 . + . ID=GSCOCT00004926001;Parent=GSCOCG00004926001;Name=Cc01_g21870 | |
| 30310 chr1 manual_curation polypeptide 38088531 38094586 . + . ID=GSCOCP00004926001;Dbxref=GENE3D:G3DSA:1.25.40.20,GENE3D:G3DSA:4.10.1100.10,InterPro:IPR004333,InterPro:IPR020683,PFAM:PF03110,PROFILE:PS51141,SUPERFAMILY:SSF103612,SUPERFAMILY:SSF48403,SwissProt:Q75LH6,SwissProt:Q9S7P5,SwissProt:Q9SMX9,TAIR:AT1G20980.1,TAIR:AT2G47070.1,TAIR:AT3G60030.1,TrEMBL:B9RN63,TrEMBL:F6HZE3,TrEMBL:G7IBS5;Derives_from=GSCOCT00004926001;Name=Cc01_g21870;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0005634,CC_EC_number:missing_EC_number,PRODUCT:Squamosa promoter-binding-like protein 1,CC_functional_completeness:complete,CC_gene:SPL1,CC_gene:SPL12,CC_gene:SPL6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004926001~ Squamosa promoter-binding-like protein 1~ SPL1~ complete;original_location=complement(join(104182..104870%2C103678..103859%2C103006..103550%2C101801..101875%2C101578..101685%2C101378..101495%2C101101..101242%2C100756..100906%2C99583..100206%2C98815..99270));owner=coffea | |
| 30311 chr1 manual_curation exon 38088155 38088275 . + . Parent=GSCOCT00004926001 | |
| 30312 chr1 manual_curation exon 38094131 38095024 . + . Parent=GSCOCT00004926001 | |
| 30313 chr1 manual_curation exon 38093195 38093818 . + . Parent=GSCOCT00004926001 | |
| 30314 chr1 manual_curation exon 38092495 38092645 . + . Parent=GSCOCT00004926001 | |
| 30315 chr1 manual_curation exon 38092159 38092300 . + . Parent=GSCOCT00004926001 | |
| 30316 chr1 manual_curation exon 38091906 38092023 . + . Parent=GSCOCT00004926001 | |
| 30317 chr1 manual_curation exon 38091716 38091823 . + . Parent=GSCOCT00004926001 | |
| 30318 chr1 manual_curation exon 38091526 38091600 . + . Parent=GSCOCT00004926001 | |
| 30319 chr1 manual_curation exon 38089851 38090395 . + . Parent=GSCOCT00004926001 | |
| 30320 chr1 manual_curation exon 38089542 38089723 . + . Parent=GSCOCT00004926001 | |
| 30321 chr1 manual_curation exon 38088477 38089219 . + . Parent=GSCOCT00004926001 | |
| 30322 chr1 manual_curation CDS 38094131 38094586 . + 0 Parent=GSCOCT00004926001 | |
| 30323 chr1 manual_curation CDS 38093195 38093818 . + 0 Parent=GSCOCT00004926001 | |
| 30324 chr1 manual_curation CDS 38092495 38092645 . + 2 Parent=GSCOCT00004926001 | |
| 30325 chr1 manual_curation CDS 38092159 38092300 . + 1 Parent=GSCOCT00004926001 | |
| 30326 chr1 manual_curation CDS 38091906 38092023 . + 0 Parent=GSCOCT00004926001 | |
| 30327 chr1 manual_curation CDS 38091716 38091823 . + 0 Parent=GSCOCT00004926001 | |
| 30328 chr1 manual_curation CDS 38091526 38091600 . + 0 Parent=GSCOCT00004926001 | |
| 30329 chr1 manual_curation CDS 38089851 38090395 . + 1 Parent=GSCOCT00004926001 | |
| 30330 chr1 manual_curation CDS 38089542 38089723 . + 2 Parent=GSCOCT00004926001 | |
| 30331 chr1 manual_curation CDS 38088531 38089219 . + 0 Parent=GSCOCT00004926001 | |
| 30332 chr1 manual_curation gene 38095247 38108624 . - . ID=GSCOCG00004925001;Name=Cc01_g21880 | |
| 30333 chr1 manual_curation mRNA 38095247 38108624 . - . ID=GSCOCT00004925001;Parent=GSCOCG00004925001;Name=Cc01_g21880 | |
| 30334 chr1 manual_curation polypeptide 38096311 38108426 . - . ID=GSCOCP00004925001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019775,InterPro:IPR019781,InterPro:IPR019782,PFAM:PF00400,PROFILE:PS50082,PROFILE:PS50294,PROSITE:PS00678,SMART:SM00320,SUPERFAMILY:SSF50978,SwissProt:A7Z052,SwissProt:Q5RB07,SwissProt:Q9NNW5,TAIR:AT4G01860.1,TrEMBL:B9GSZ1,TrEMBL:F6HZE0,TrEMBL:Q8RXC4;Derives_from=GSCOCT00004925001;Name=Cc01_g21880;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Transducin family protein / WD-40 repeat family protein,CC_functional_completeness:complete,CC_gene:WDR6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004925001~ Putative Transducin family protein / WD-40 repeat family protein~ WDR6~ complete;original_location=join(84975..85152%2C85269..85612%2C85760..85877%2C86164..86246%2C87470..87687%2C87770..87899%2C88573..88655%2C89081..89293%2C90002..90355%2C90774..90945%2C91137..91325%2C91527..91736%2C91838..91930%2C92570..92784%2C92949..93524%2C93613..93693%2C93816..93898%2C95651..96556%2C96771..96924%2C97024..97090);owner=coffea | |
| 30335 chr1 manual_curation exon 38108249 38108624 . - . Parent=GSCOCT00004925001 | |
| 30336 chr1 manual_curation exon 38107789 38108132 . - . Parent=GSCOCT00004925001 | |
| 30337 chr1 manual_curation exon 38107524 38107641 . - . Parent=GSCOCT00004925001 | |
| 30338 chr1 manual_curation exon 38107155 38107237 . - . Parent=GSCOCT00004925001 | |
| 30339 chr1 manual_curation exon 38105714 38105931 . - . Parent=GSCOCT00004925001 | |
| 30340 chr1 manual_curation exon 38105502 38105631 . - . Parent=GSCOCT00004925001 | |
| 30341 chr1 manual_curation exon 38104746 38104828 . - . Parent=GSCOCT00004925001 | |
| 30342 chr1 manual_curation exon 38104108 38104320 . - . Parent=GSCOCT00004925001 | |
| 30343 chr1 manual_curation exon 38103046 38103399 . - . Parent=GSCOCT00004925001 | |
| 30344 chr1 manual_curation exon 38102456 38102627 . - . Parent=GSCOCT00004925001 | |
| 30345 chr1 manual_curation exon 38102076 38102264 . - . Parent=GSCOCT00004925001 | |
| 30346 chr1 manual_curation exon 38101665 38101874 . - . Parent=GSCOCT00004925001 | |
| 30347 chr1 manual_curation exon 38101471 38101563 . - . Parent=GSCOCT00004925001 | |
| 30348 chr1 manual_curation exon 38100617 38100831 . - . Parent=GSCOCT00004925001 | |
| 30349 chr1 manual_curation exon 38099877 38100452 . - . Parent=GSCOCT00004925001 | |
| 30350 chr1 manual_curation exon 38099708 38099788 . - . Parent=GSCOCT00004925001 | |
| 30351 chr1 manual_curation exon 38099503 38099585 . - . Parent=GSCOCT00004925001 | |
| 30352 chr1 manual_curation exon 38096845 38097750 . - . Parent=GSCOCT00004925001 | |
| 30353 chr1 manual_curation exon 38096477 38096630 . - . Parent=GSCOCT00004925001 | |
| 30354 chr1 manual_curation exon 38095247 38096377 . - . Parent=GSCOCT00004925001 | |
| 30355 chr1 manual_curation CDS 38108249 38108426 . - 0 Parent=GSCOCT00004925001 | |
| 30356 chr1 manual_curation CDS 38107789 38108132 . - 1 Parent=GSCOCT00004925001 | |
| 30357 chr1 manual_curation CDS 38107524 38107641 . - 0 Parent=GSCOCT00004925001 | |
| 30358 chr1 manual_curation CDS 38107155 38107237 . - 1 Parent=GSCOCT00004925001 | |
| 30359 chr1 manual_curation CDS 38105714 38105931 . - 0 Parent=GSCOCT00004925001 | |
| 30360 chr1 manual_curation CDS 38105502 38105631 . - 2 Parent=GSCOCT00004925001 | |
| 30361 chr1 manual_curation CDS 38104746 38104828 . - 0 Parent=GSCOCT00004925001 | |
| 30362 chr1 manual_curation CDS 38104108 38104320 . - 2 Parent=GSCOCT00004925001 | |
| 30363 chr1 manual_curation CDS 38103046 38103399 . - 2 Parent=GSCOCT00004925001 | |
| 30364 chr1 manual_curation CDS 38102456 38102627 . - 2 Parent=GSCOCT00004925001 | |
| 30365 chr1 manual_curation CDS 38102076 38102264 . - 0 Parent=GSCOCT00004925001 | |
| 30366 chr1 manual_curation CDS 38101665 38101874 . - 0 Parent=GSCOCT00004925001 | |
| 30367 chr1 manual_curation CDS 38101471 38101563 . - 0 Parent=GSCOCT00004925001 | |
| 30368 chr1 manual_curation CDS 38100617 38100831 . - 0 Parent=GSCOCT00004925001 | |
| 30369 chr1 manual_curation CDS 38099877 38100452 . - 2 Parent=GSCOCT00004925001 | |
| 30370 chr1 manual_curation CDS 38099708 38099788 . - 2 Parent=GSCOCT00004925001 | |
| 30371 chr1 manual_curation CDS 38099503 38099585 . - 2 Parent=GSCOCT00004925001 | |
| 30372 chr1 manual_curation CDS 38096845 38097750 . - 1 Parent=GSCOCT00004925001 | |
| 30373 chr1 manual_curation CDS 38096477 38096630 . - 1 Parent=GSCOCT00004925001 | |
| 30374 chr1 manual_curation CDS 38096311 38096377 . - 2 Parent=GSCOCT00004925001 | |
| 30375 chr1 manual_curation gene 38110317 38112011 . + . ID=GSCOCG00004923001;Name=Cc01_g21890 | |
| 30376 chr1 manual_curation mRNA 38110317 38112011 . + . ID=GSCOCT00004923001;Parent=GSCOCG00004923001;Name=Cc01_g21890 | |
| 30377 chr1 manual_curation polypeptide 38110439 38111727 . + . ID=GSCOCP00004923001;Dbxref=InterPro:IPR004241,PANTHER:PTHR10969,PFAM:PF02991,SwissProt:Q2RBS4,SwissProt:Q8S925,SwissProt:Q9LRP7,TAIR:AT3G06420.1,TAIR:AT3G15580.1,TAIR:AT4G21980.2,TrEMBL:B9RN69,TrEMBL:E1CGN2,TrEMBL:F2YHL2;Derives_from=GSCOCT00004923001;Name=Cc01_g21890;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Autophagy-related protein 8i,CC_functional_completeness:complete,CC_gene:ATG8I,CC_gene:ATG8H,CC_gene:ATG8D;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004923001~ Autophagy-related protein 8i~ ATG8I~ complete;original_location=complement(join(82914..82962%2C82747..82802%2C82150..82202%2C81870..81988%2C81674..81771));owner=coffea | |
| 30378 chr1 manual_curation exon 38111630 38112011 . + . Parent=GSCOCT00004923001 | |
| 30379 chr1 manual_curation exon 38111413 38111531 . + . Parent=GSCOCT00004923001 | |
| 30380 chr1 manual_curation exon 38111199 38111251 . + . Parent=GSCOCT00004923001 | |
| 30381 chr1 manual_curation exon 38110599 38110654 . + . Parent=GSCOCT00004923001 | |
| 30382 chr1 manual_curation exon 38110317 38110487 . + . Parent=GSCOCT00004923001 | |
| 30383 chr1 manual_curation CDS 38111630 38111727 . + 1 Parent=GSCOCT00004923001 | |
| 30384 chr1 manual_curation CDS 38111413 38111531 . + 2 Parent=GSCOCT00004923001 | |
| 30385 chr1 manual_curation CDS 38111199 38111251 . + 0 Parent=GSCOCT00004923001 | |
| 30386 chr1 manual_curation CDS 38110599 38110654 . + 1 Parent=GSCOCT00004923001 | |
| 30387 chr1 manual_curation CDS 38110439 38110487 . + 0 Parent=GSCOCT00004923001 | |
| 30388 chr1 manual_curation gene 38112523 38117978 . - . ID=GSCOCG00004922001;Name=Cc01_g21900 | |
| 30389 chr1 manual_curation mRNA 38112523 38117978 . - . ID=GSCOCT00004922001;Parent=GSCOCG00004922001;Name=Cc01_g21900 | |
| 30390 chr1 manual_curation polypeptide 38112949 38117560 . - . ID=GSCOCP00004922001;Dbxref=InterPro:IPR001841,InterPro:IPR015880,PROFILE:PS50089,SMART:SM00355,SwissProt:Q05580,SwissProt:Q76PD2,SwissProt:Q86UK7,TAIR:AT2G47090.1,TAIR:AT3G62240.1,TrEMBL:B9GSY9,TrEMBL:B9I9D3,TrEMBL:F6HZD9;Derives_from=GSCOCT00004922001;Name=Cc01_g21900;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0005622,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:RING/U-box superfamily protein,CC_functional_completeness:complete,CC_gene:SPCC1223.01,CC_gene:YDR266C,CC_gene:ZNF598;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004922001~ RING/U-box superfamily protein~ SPCC1223.01~ complete;original_location=join(75841..76008%2C76386..76697%2C77585..77793%2C77915..77963%2C78060..78149%2C78319..78381%2C78656..79252%2C79322..80141%2C80199..80452);owner=coffea | |
| 30391 chr1 manual_curation exon 38117393 38117978 . - . Parent=GSCOCT00004922001 | |
| 30392 chr1 manual_curation exon 38116704 38117015 . - . Parent=GSCOCT00004922001 | |
| 30393 chr1 manual_curation exon 38115608 38115816 . - . Parent=GSCOCT00004922001 | |
| 30394 chr1 manual_curation exon 38115438 38115486 . - . Parent=GSCOCT00004922001 | |
| 30395 chr1 manual_curation exon 38115252 38115341 . - . Parent=GSCOCT00004922001 | |
| 30396 chr1 manual_curation exon 38115020 38115082 . - . Parent=GSCOCT00004922001 | |
| 30397 chr1 manual_curation exon 38114149 38114745 . - . Parent=GSCOCT00004922001 | |
| 30398 chr1 manual_curation exon 38113260 38114079 . - . Parent=GSCOCT00004922001 | |
| 30399 chr1 manual_curation exon 38112523 38113202 . - . Parent=GSCOCT00004922001 | |
| 30400 chr1 manual_curation CDS 38117393 38117560 . - 0 Parent=GSCOCT00004922001 | |
| 30401 chr1 manual_curation CDS 38116704 38117015 . - 0 Parent=GSCOCT00004922001 | |
| 30402 chr1 manual_curation CDS 38115608 38115816 . - 0 Parent=GSCOCT00004922001 | |
| 30403 chr1 manual_curation CDS 38115438 38115486 . - 2 Parent=GSCOCT00004922001 | |
| 30404 chr1 manual_curation CDS 38115252 38115341 . - 0 Parent=GSCOCT00004922001 | |
| 30405 chr1 manual_curation CDS 38115020 38115082 . - 0 Parent=GSCOCT00004922001 | |
| 30406 chr1 manual_curation CDS 38114149 38114745 . - 0 Parent=GSCOCT00004922001 | |
| 30407 chr1 manual_curation CDS 38113260 38114079 . - 0 Parent=GSCOCT00004922001 | |
| 30408 chr1 manual_curation CDS 38112949 38113202 . - 1 Parent=GSCOCT00004922001 | |
| 30409 chr1 manual_curation gene 38119827 38122935 . - . ID=GSCOCG00004921001;Name=Cc01_g21910 | |
| 30410 chr1 manual_curation mRNA 38119827 38122935 . - . ID=GSCOCT00004921001;Parent=GSCOCG00004921001;Name=Cc01_g21910 | |
| 30411 chr1 manual_curation polypeptide 38119827 38122935 . - . ID=GSCOCP00004921001;Dbxref=GENE3D:G3DSA:1.10.238.10,InterPro:IPR011992,InterPro:IPR015757,InterPro:IPR018249,PANTHER:PTHR23056:SF3,PROFILE:PS50222,SwissProt:Q3HRP5,SwissProt:Q75LU8,SwissProt:Q8LAS7,TAIR:AT3G09320.1,TAIR:AT4G26570.2,TAIR:AT5G55990.1,TrEMBL:A5AHA7,TrEMBL:B0I559,TrEMBL:I1MQW3;Derives_from=GSCOCT00004921001;Name=Cc01_g21910;Ontology_term=CC_evidence_code:ISS,GO:0005509,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:CBL2,CC_gene:CBL3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004921001~ Hypothetical protein~ CBL2~ missing_functional_completeness;original_location=join(70466..70589%2C71533..71615%2C71786..71860%2C72371..72571%2C72778..72837%2C72917..73015%2C73105..73200%2C73398..73574);owner=coffea | |
| 30412 chr1 manual_curation exon 38122812 38122935 . - . Parent=GSCOCT00004921001 | |
| 30413 chr1 manual_curation exon 38121786 38121868 . - . Parent=GSCOCT00004921001 | |
| 30414 chr1 manual_curation exon 38121541 38121615 . - . Parent=GSCOCT00004921001 | |
| 30415 chr1 manual_curation exon 38120830 38121030 . - . Parent=GSCOCT00004921001 | |
| 30416 chr1 manual_curation exon 38120564 38120623 . - . Parent=GSCOCT00004921001 | |
| 30417 chr1 manual_curation exon 38120386 38120484 . - . Parent=GSCOCT00004921001 | |
| 30418 chr1 manual_curation exon 38120201 38120296 . - . Parent=GSCOCT00004921001 | |
| 30419 chr1 manual_curation exon 38119827 38120003 . - . Parent=GSCOCT00004921001 | |
| 30420 chr1 manual_curation CDS 38122812 38122935 . - 0 Parent=GSCOCT00004921001 | |
| 30421 chr1 manual_curation CDS 38121786 38121868 . - 1 Parent=GSCOCT00004921001 | |
| 30422 chr1 manual_curation CDS 38121541 38121615 . - 0 Parent=GSCOCT00004921001 | |
| 30423 chr1 manual_curation CDS 38120830 38121030 . - 0 Parent=GSCOCT00004921001 | |
| 30424 chr1 manual_curation CDS 38120564 38120623 . - 0 Parent=GSCOCT00004921001 | |
| 30425 chr1 manual_curation CDS 38120386 38120484 . - 0 Parent=GSCOCT00004921001 | |
| 30426 chr1 manual_curation CDS 38120201 38120296 . - 0 Parent=GSCOCT00004921001 | |
| 30427 chr1 manual_curation CDS 38119827 38120003 . - 0 Parent=GSCOCT00004921001 | |
| 30428 chr1 manual_curation gene 38134685 38138791 . - . ID=GSCOCG00004920001;Name=Cc01_g21920 | |
| 30429 chr1 manual_curation mRNA 38134685 38138791 . - . ID=GSCOCT00004920001;Parent=GSCOCG00004920001;Name=Cc01_g21920 | |
| 30430 chr1 manual_curation polypeptide 38134909 38138322 . - . ID=GSCOCP00004920001;Dbxref=InterPro:IPR007871,InterPro:IPR021721,InterPro:IPR022776,PFAM:PF05206,PFAM:PF05253,PFAM:PF11722,SwissProt:A7TSF4,SwissProt:Q8BYH3,SwissProt:Q9NUP7,TAIR:AT4G01880.1,TrEMBL:A5AGU8,TrEMBL:B9RN72,TrEMBL:F6HZD6;Derives_from=GSCOCT00004920001;Name=Cc01_g21920;Ontology_term=CC_evidence_code:ISS,GO:0008033,GO:0008168,CC_EC_number:missing_EC_number,PRODUCT:Putative tRNA guanosine-2'-O-methyltransferase TRM13 homolog,CC_functional_completeness:complete,CC_gene:Ccdc76,CC_gene:CCDC76,CC_gene:TRM13;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004920001~ Putative tRNA guanosine-2'-O-methyltransferase TRM13 homolog~ Ccdc76~ complete;original_location=join(55079..55164%2C55327..55392%2C55543..55854%2C55993..56245%2C56401..56458%2C57237..57323%2C57433..57567%2C57678..57813%2C58234..58492);owner=coffea | |
| 30431 chr1 manual_curation exon 38138237 38138791 . - . Parent=GSCOCT00004920001 | |
| 30432 chr1 manual_curation exon 38138009 38138074 . - . Parent=GSCOCT00004920001 | |
| 30433 chr1 manual_curation exon 38137547 38137858 . - . Parent=GSCOCT00004920001 | |
| 30434 chr1 manual_curation exon 38137156 38137408 . - . Parent=GSCOCT00004920001 | |
| 30435 chr1 manual_curation exon 38136943 38137000 . - . Parent=GSCOCT00004920001 | |
| 30436 chr1 manual_curation exon 38136078 38136164 . - . Parent=GSCOCT00004920001 | |
| 30437 chr1 manual_curation exon 38135834 38135968 . - . Parent=GSCOCT00004920001 | |
| 30438 chr1 manual_curation exon 38135588 38135723 . - . Parent=GSCOCT00004920001 | |
| 30439 chr1 manual_curation exon 38134685 38135167 . - . Parent=GSCOCT00004920001 | |
| 30440 chr1 manual_curation CDS 38138237 38138322 . - 0 Parent=GSCOCT00004920001 | |
| 30441 chr1 manual_curation CDS 38138009 38138074 . - 2 Parent=GSCOCT00004920001 | |
| 30442 chr1 manual_curation CDS 38137547 38137858 . - 2 Parent=GSCOCT00004920001 | |
| 30443 chr1 manual_curation CDS 38137156 38137408 . - 2 Parent=GSCOCT00004920001 | |
| 30444 chr1 manual_curation CDS 38136943 38137000 . - 0 Parent=GSCOCT00004920001 | |
| 30445 chr1 manual_curation CDS 38136078 38136164 . - 1 Parent=GSCOCT00004920001 | |
| 30446 chr1 manual_curation CDS 38135834 38135968 . - 1 Parent=GSCOCT00004920001 | |
| 30447 chr1 manual_curation CDS 38135588 38135723 . - 1 Parent=GSCOCT00004920001 | |
| 30448 chr1 manual_curation CDS 38134909 38135167 . - 2 Parent=GSCOCT00004920001 | |
| 30449 chr1 manual_curation gene 38140274 38144513 . - . ID=GSCOCG00004919001;Name=Cc01_g21930 | |
| 30450 chr1 manual_curation mRNA 38140274 38144513 . - . ID=GSCOCT00004919001;Parent=GSCOCG00004919001;Name=Cc01_g21930 | |
| 30451 chr1 manual_curation polypeptide 38140545 38144329 . - . ID=GSCOCP00004919001;Dbxref=TAIR:AT1G10660.2,TAIR:AT2G47115.1,TAIR:AT5G62960.1,TrEMBL:A9P7U0,TrEMBL:B9GSY5,TrEMBL:B9RN75;Derives_from=GSCOCT00004919001;Name=Cc01_g21930;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004919001~ Putative unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10660.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(49072..49412%2C49885..49918%2C50079..50318%2C51321..51410%2C51911..51976%2C52090..52181%2C52302..52349%2C52436..52543%2C52826..52856);owner=coffea | |
| 30452 chr1 manual_curation exon 38143989 38144513 . - . Parent=GSCOCT00004919001 | |
| 30453 chr1 manual_curation exon 38143483 38143516 . - . Parent=GSCOCT00004919001 | |
| 30454 chr1 manual_curation exon 38143083 38143322 . - . Parent=GSCOCT00004919001 | |
| 30455 chr1 manual_curation exon 38141991 38142080 . - . Parent=GSCOCT00004919001 | |
| 30456 chr1 manual_curation exon 38141425 38141490 . - . Parent=GSCOCT00004919001 | |
| 30457 chr1 manual_curation exon 38141220 38141311 . - . Parent=GSCOCT00004919001 | |
| 30458 chr1 manual_curation exon 38141052 38141099 . - . Parent=GSCOCT00004919001 | |
| 30459 chr1 manual_curation exon 38140858 38140965 . - . Parent=GSCOCT00004919001 | |
| 30460 chr1 manual_curation exon 38140274 38140575 . - . Parent=GSCOCT00004919001 | |
| 30461 chr1 manual_curation CDS 38143989 38144329 . - 0 Parent=GSCOCT00004919001 | |
| 30462 chr1 manual_curation CDS 38143483 38143516 . - 2 Parent=GSCOCT00004919001 | |
| 30463 chr1 manual_curation CDS 38143083 38143322 . - 0 Parent=GSCOCT00004919001 | |
| 30464 chr1 manual_curation CDS 38141991 38142080 . - 0 Parent=GSCOCT00004919001 | |
| 30465 chr1 manual_curation CDS 38141425 38141490 . - 0 Parent=GSCOCT00004919001 | |
| 30466 chr1 manual_curation CDS 38141220 38141311 . - 0 Parent=GSCOCT00004919001 | |
| 30467 chr1 manual_curation CDS 38141052 38141099 . - 2 Parent=GSCOCT00004919001 | |
| 30468 chr1 manual_curation CDS 38140858 38140965 . - 2 Parent=GSCOCT00004919001 | |
| 30469 chr1 manual_curation CDS 38140545 38140575 . - 2 Parent=GSCOCT00004919001 | |
| 30470 chr1 manual_curation gene 38145705 38148527 . + . ID=GSCOCG00004918001;Name=Cc01_g21940 | |
| 30471 chr1 manual_curation mRNA 38145705 38148527 . + . ID=GSCOCT00004918001;Parent=GSCOCG00004918001;Name=Cc01_g21940 | |
| 30472 chr1 manual_curation polypeptide 38146025 38148320 . + . ID=GSCOCP00004918001;Dbxref=InterPro:IPR005031,PFAM:PF03364,TAIR:AT1G02470.2,TAIR:AT1G02475.1,TAIR:AT4G01883.1,TrEMBL:B7FHB4,TrEMBL:B9RN77,TrEMBL:C6TKG7;Derives_from=GSCOCT00004918001;Name=Cc01_g21940;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004918001~ Putative uncharacterized protein~ unknown_gene~ modules;original_location=complement(join(46946..47376%2C46550..46649%2C46143..46238%2C45983..46035%2C45856..45904%2C45419..45466%2C45081..45176));owner=coffea | |
| 30473 chr1 manual_curation exon 38148225 38148527 . + . Parent=GSCOCT00004918001 | |
| 30474 chr1 manual_curation exon 38147935 38147982 . + . Parent=GSCOCT00004918001 | |
| 30475 chr1 manual_curation exon 38147497 38147545 . + . Parent=GSCOCT00004918001 | |
| 30476 chr1 manual_curation exon 38147366 38147418 . + . Parent=GSCOCT00004918001 | |
| 30477 chr1 manual_curation exon 38147163 38147258 . + . Parent=GSCOCT00004918001 | |
| 30478 chr1 manual_curation exon 38146752 38146851 . + . Parent=GSCOCT00004918001 | |
| 30479 chr1 manual_curation exon 38145705 38146455 . + . Parent=GSCOCT00004918001 | |
| 30480 chr1 manual_curation CDS 38148225 38148320 . + 0 Parent=GSCOCT00004918001 | |
| 30481 chr1 manual_curation CDS 38147935 38147982 . + 0 Parent=GSCOCT00004918001 | |
| 30482 chr1 manual_curation CDS 38147497 38147545 . + 2 Parent=GSCOCT00004918001 | |
| 30483 chr1 manual_curation CDS 38147366 38147418 . + 0 Parent=GSCOCT00004918001 | |
| 30484 chr1 manual_curation CDS 38147163 38147258 . + 0 Parent=GSCOCT00004918001 | |
| 30485 chr1 manual_curation CDS 38146752 38146851 . + 2 Parent=GSCOCT00004918001 | |
| 30486 chr1 manual_curation CDS 38146025 38146455 . + 0 Parent=GSCOCT00004918001 | |
| 30487 chr1 manual_curation gene 38152767 38156391 . + . ID=GSCOCG00004916001;Name=Cc01_g21950 | |
| 30488 chr1 manual_curation mRNA 38152767 38156391 . + . ID=GSCOCT00004916001;Parent=GSCOCG00004916001;Name=Cc01_g21950 | |
| 30489 chr1 manual_curation polypeptide 38152767 38156060 . + . ID=GSCOCP00004916001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:P43288,SwissProt:P43289,SwissProt:Q8VZD5,TAIR:AT3G05840.2,TAIR:AT5G14640.1,TAIR:AT5G26751.1,TrEMBL:B6T841,TrEMBL:D7U2N9,TrEMBL:I1HDY0;Derives_from=GSCOCT00004916001;Name=Cc01_g21950;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.26,PRODUCT:Shaggy-related protein kinase alpha,CC_functional_completeness:complete,CC_gene:ASK1,CC_gene:ASK5,CC_gene:ASK3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004916001~ Shaggy-related protein kinase alpha~ ASK1~ complete;original_location=complement(join(40605..40634%2C40390..40482%2C40240..40299%2C39234..39521%2C39055..39129%2C38668..38724%2C38428..38568%2C38280..38330%2C37965..38060%2C37790..37873%2C37523..37625%2C37341..37423));owner=coffea | |
| 30490 chr1 manual_curation exon 38155978 38156391 . + . Parent=GSCOCT00004916001 | |
| 30491 chr1 manual_curation exon 38155776 38155878 . + . Parent=GSCOCT00004916001 | |
| 30492 chr1 manual_curation exon 38155528 38155611 . + . Parent=GSCOCT00004916001 | |
| 30493 chr1 manual_curation exon 38155341 38155436 . + . Parent=GSCOCT00004916001 | |
| 30494 chr1 manual_curation exon 38155071 38155121 . + . Parent=GSCOCT00004916001 | |
| 30495 chr1 manual_curation exon 38154833 38154973 . + . Parent=GSCOCT00004916001 | |
| 30496 chr1 manual_curation exon 38154677 38154733 . + . Parent=GSCOCT00004916001 | |
| 30497 chr1 manual_curation exon 38154272 38154346 . + . Parent=GSCOCT00004916001 | |
| 30498 chr1 manual_curation exon 38153880 38154167 . + . Parent=GSCOCT00004916001 | |
| 30499 chr1 manual_curation exon 38153102 38153161 . + . Parent=GSCOCT00004916001 | |
| 30500 chr1 manual_curation exon 38152919 38153011 . + . Parent=GSCOCT00004916001 | |
| 30501 chr1 manual_curation exon 38152767 38152796 . + . Parent=GSCOCT00004916001 | |
| 30502 chr1 manual_curation CDS 38155978 38156060 . + 1 Parent=GSCOCT00004916001 | |
| 30503 chr1 manual_curation CDS 38155776 38155878 . + 0 Parent=GSCOCT00004916001 | |
| 30504 chr1 manual_curation CDS 38155528 38155611 . + 0 Parent=GSCOCT00004916001 | |
| 30505 chr1 manual_curation CDS 38155341 38155436 . + 0 Parent=GSCOCT00004916001 | |
| 30506 chr1 manual_curation CDS 38155071 38155121 . + 0 Parent=GSCOCT00004916001 | |
| 30507 chr1 manual_curation CDS 38154833 38154973 . + 0 Parent=GSCOCT00004916001 | |
| 30508 chr1 manual_curation CDS 38154677 38154733 . + 0 Parent=GSCOCT00004916001 | |
| 30509 chr1 manual_curation CDS 38154272 38154346 . + 0 Parent=GSCOCT00004916001 | |
| 30510 chr1 manual_curation CDS 38153880 38154167 . + 0 Parent=GSCOCT00004916001 | |
| 30511 chr1 manual_curation CDS 38153102 38153161 . + 0 Parent=GSCOCT00004916001 | |
| 30512 chr1 manual_curation CDS 38152919 38153011 . + 0 Parent=GSCOCT00004916001 | |
| 30513 chr1 manual_curation CDS 38152767 38152796 . + 0 Parent=GSCOCT00004916001 | |
| 30514 chr1 manual_curation gene 38158326 38160554 . - . ID=GSCOCG00004915001;Name=Cc01_g21960 | |
| 30515 chr1 manual_curation mRNA 38158326 38160554 . - . ID=GSCOCT00004915001;Parent=GSCOCG00004915001;Name=Cc01_g21960 | |
| 30516 chr1 manual_curation polypeptide 38158754 38160438 . - . ID=GSCOCP00004915001;Dbxref=InterPro:IPR009297,PFAM:PF06108,TAIR:AT4G01897.1,TrEMBL:C6SWB0,TrEMBL:D7U2N3,TrEMBL:G7KTP9;Derives_from=GSCOCT00004915001;Name=Cc01_g21960;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B CONTAINS InterPro DOMAIN/s,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004915001~ unknown protein%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF952 (InterPro:IPR009297)%3B Has 763 Blast hits to 763 proteins in 180 species: Archae - 0%3B Bacteria - 351%3B Metazoa - 0%3B Fungi - 0%3B Plants - 29%3B Viruses - 0%3B Other Eukaryotes - 383 (source: NCBI BLink).~ unknown_gene~ modules;original_location=join(32963..33178%2C34261..34338%2C34480..34647);owner=coffea | |
| 30517 chr1 manual_curation exon 38160223 38160554 . - . Parent=GSCOCT00004915001 | |
| 30518 chr1 manual_curation exon 38159063 38159140 . - . Parent=GSCOCT00004915001 | |
| 30519 chr1 manual_curation exon 38158326 38158921 . - . Parent=GSCOCT00004915001 | |
| 30520 chr1 manual_curation CDS 38160223 38160438 . - 0 Parent=GSCOCT00004915001 | |
| 30521 chr1 manual_curation CDS 38159063 38159140 . - 0 Parent=GSCOCT00004915001 | |
| 30522 chr1 manual_curation CDS 38158754 38158921 . - 0 Parent=GSCOCT00004915001 | |
| 30523 chr1 manual_curation gene 38161535 38166617 . - . ID=GSCOCG00004914001;Name=Cc01_g21970 | |
| 30524 chr1 manual_curation mRNA 38161535 38166617 . - . ID=GSCOCT00004914001;Parent=GSCOCG00004914001;Name=Cc01_g21970 | |
| 30525 chr1 manual_curation polypeptide 38162008 38166484 . - . ID=GSCOCP00004914001;Dbxref=GENE3D:G3DSA:3.30.70.120,InterPro:IPR002187,InterPro:IPR011322,InterPro:IPR015867,InterPro:IPR017918,PFAM:PF00543,PRINTS:PR00340,PROFILE:PS51343,PROSITE:PS00638,SUPERFAMILY:SSF54913,SwissProt:O30794,SwissProt:Q6AUR2,SwissProt:Q9ZST4,TAIR:AT4G01900.1,TrEMBL:A8TU50,TrEMBL:Q6T2D2,TrEMBL:Q9ZST5;Derives_from=GSCOCT00004914001;Name=Cc01_g21970;Ontology_term=CC_evidence_code:ISS,GO:0006808,GO:0030234,CC_EC_number:missing_EC_number,PRODUCT:Nitrogen regulatory protein P-II,CC_functional_completeness:modules,CC_gene:GLB1,CC_gene:GLB,CC_gene:glnB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004914001~ Nitrogen regulatory protein P-II~ GLB1~ modules;original_location=join(26917..27187%2C27356..27401%2C27544..27571%2C29548..29635%2C29890..29957%2C30139..30208%2C31205..31240%2C31377..31393);owner=coffea | |
| 30526 chr1 manual_curation exon 38166214 38166617 . - . Parent=GSCOCT00004914001 | |
| 30527 chr1 manual_curation exon 38166000 38166045 . - . Parent=GSCOCT00004914001 | |
| 30528 chr1 manual_curation exon 38165830 38165857 . - . Parent=GSCOCT00004914001 | |
| 30529 chr1 manual_curation exon 38163766 38163853 . - . Parent=GSCOCT00004914001 | |
| 30530 chr1 manual_curation exon 38163444 38163511 . - . Parent=GSCOCT00004914001 | |
| 30531 chr1 manual_curation exon 38163193 38163262 . - . Parent=GSCOCT00004914001 | |
| 30532 chr1 manual_curation exon 38162161 38162196 . - . Parent=GSCOCT00004914001 | |
| 30533 chr1 manual_curation exon 38161535 38162024 . - . Parent=GSCOCT00004914001 | |
| 30534 chr1 manual_curation CDS 38166214 38166484 . - 0 Parent=GSCOCT00004914001 | |
| 30535 chr1 manual_curation CDS 38166000 38166045 . - 1 Parent=GSCOCT00004914001 | |
| 30536 chr1 manual_curation CDS 38165830 38165857 . - 2 Parent=GSCOCT00004914001 | |
| 30537 chr1 manual_curation CDS 38163766 38163853 . - 0 Parent=GSCOCT00004914001 | |
| 30538 chr1 manual_curation CDS 38163444 38163511 . - 1 Parent=GSCOCT00004914001 | |
| 30539 chr1 manual_curation CDS 38163193 38163262 . - 0 Parent=GSCOCT00004914001 | |
| 30540 chr1 manual_curation CDS 38162161 38162196 . - 1 Parent=GSCOCT00004914001 | |
| 30541 chr1 manual_curation CDS 38162008 38162024 . - 1 Parent=GSCOCT00004914001 | |
| 30542 chr1 manual_curation gene 38175760 38179066 . - . ID=GSCOCG00004913001;Name=Cc01_g21980 | |
| 30543 chr1 manual_curation mRNA 38175760 38179066 . - . ID=GSCOCT00004913001;Parent=GSCOCG00004913001;Name=Cc01_g21980 | |
| 30544 chr1 manual_curation polypeptide 38175760 38179066 . - . ID=GSCOCP00004913001;Dbxref=InterPro:IPR002283,InterPro:IPR005123,PFAM:PF03171,PRINTS:PR00682,SwissProt:Q9XFR9,SwissProt:Q9XG83,SwissProt:Q9XHM5,TAIR:AT1G02400.1,TAIR:AT1G30040.1,TAIR:AT1G47990.1,TrEMBL:B9GSW8,TrEMBL:B9I9F6,TrEMBL:B9RN97;Derives_from=GSCOCT00004913001;Name=Cc01_g21980;Ontology_term=CC_evidence_code:ISS,GO:0005506,GO:0016491,GO:0055114,CC_EC_number:1.14.11.9,PRODUCT:Gibberellin 2-beta-dioxygenase 2,CC_functional_completeness:complete,CC_gene:GA2OX2,CC_gene:GA2OX1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004913001~ Gibberellin 2-beta-dioxygenase 2~ GA2OX2~ complete;original_location=join(14335..14652%2C16430..16449%2C16860..17277%2C17399..17641);owner=coffea | |
| 30545 chr1 manual_curation exon 38178749 38179066 . - . Parent=GSCOCT00004913001 | |
| 30546 chr1 manual_curation exon 38176952 38176971 . - . Parent=GSCOCT00004913001 | |
| 30547 chr1 manual_curation exon 38176124 38176541 . - . Parent=GSCOCT00004913001 | |
| 30548 chr1 manual_curation exon 38175760 38176002 . - . Parent=GSCOCT00004913001 | |
| 30549 chr1 manual_curation CDS 38178749 38179066 . - 0 Parent=GSCOCT00004913001 | |
| 30550 chr1 manual_curation CDS 38176952 38176971 . - 0 Parent=GSCOCT00004913001 | |
| 30551 chr1 manual_curation CDS 38176124 38176541 . - 2 Parent=GSCOCT00004913001 | |
| 30552 chr1 manual_curation CDS 38175760 38176002 . - 0 Parent=GSCOCT00004913001 | |
| 30553 chr10 manual_curation gene 1317 6551 . - . ID=GSCOCG00024436001;Name=Cc10_g00010 | |
| 30554 chr10 manual_curation mRNA 1317 6551 . - . ID=GSCOCT00024436001;Parent=GSCOCG00024436001;Name=Cc10_g00010 | |
| 30555 chr10 manual_curation polypeptide 2585 6197 . - . ID=GSCOCP00024436001;Dbxref=InterPro:IPR000719,InterPro:IPR004147,InterPro:IPR011009,PFAM:PF03109,PROFILE:PS50011,SUPERFAMILY:SSF56112,SwissProt:P73121,SwissProt:Q55680,SwissProt:Q9MA15,TAIR:AT1G71810.1,TAIR:AT1G79600.1,TAIR:AT3G24190.1,TrEMBL:B9GPJ6,TrEMBL:D7TUH7,TrEMBL:I1J6H9;Derives_from=GSCOCT00024436001;Name=Cc10_g00010;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0005524,GO:0006468,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterized aarF domain-containing protein kinase At1g79600%2C chloroplastic,CC_functional_completeness:complete,CC_gene:At1g79600,CC_gene:sll0005,CC_gene:slr1919;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024436001~ Uncharacterized aarF domain-containing protein kinase At1g79600%2C chloroplastic~ At1g79600~ complete;original_location=complement(join(6102..6197%2C5726..5953%2C5068..5403%2C4323..4878%2C3905..4091%2C3449..3815%2C2585..2719));owner=coffea | |
| 30556 chr10 manual_curation exon 1317 2719 . - . Parent=GSCOCT00024436001 | |
| 30557 chr10 manual_curation exon 3449 3815 . - . Parent=GSCOCT00024436001 | |
| 30558 chr10 manual_curation exon 3905 4091 . - . Parent=GSCOCT00024436001 | |
| 30559 chr10 manual_curation exon 4323 4878 . - . Parent=GSCOCT00024436001 | |
| 30560 chr10 manual_curation exon 5068 5403 . - . Parent=GSCOCT00024436001 | |
| 30561 chr10 manual_curation exon 5726 5953 . - . Parent=GSCOCT00024436001 | |
| 30562 chr10 manual_curation exon 6102 6551 . - . Parent=GSCOCT00024436001 | |
| 30563 chr10 manual_curation CDS 2585 2719 . - 0 Parent=GSCOCT00024436001 | |
| 30564 chr10 manual_curation CDS 3449 3815 . - 2 Parent=GSCOCT00024436001 | |
| 30565 chr10 manual_curation CDS 3905 4091 . - 1 Parent=GSCOCT00024436001 | |
| 30566 chr10 manual_curation CDS 4323 4878 . - 0 Parent=GSCOCT00024436001 | |
| 30567 chr10 manual_curation CDS 5068 5403 . - 0 Parent=GSCOCT00024436001 | |
| 30568 chr10 manual_curation CDS 5726 5953 . - 0 Parent=GSCOCT00024436001 | |
| 30569 chr10 manual_curation CDS 6102 6197 . - 0 Parent=GSCOCT00024436001 | |
| 30570 chr10 manual_curation gene 7564 17105 . - . ID=GSCOCG00024437001;Name=Cc10_g00020 | |
| 30571 chr10 manual_curation mRNA 7564 17105 . - . ID=GSCOCT00024437001;Parent=GSCOCG00024437001;Name=Cc10_g00020 | |
| 30572 chr10 manual_curation polypeptide 7997 17045 . - . ID=GSCOCP00024437001;Dbxref=InterPro:IPR001993,InterPro:IPR018108,PANTHER:PTHR11896,PFAM:PF00153,PROFILE:PS50920,SUPERFAMILY:SSF103506,SwissProt:O43808,SwissProt:P21245,SwissProt:Q76P23,TAIR:AT1G25380.1,TAIR:AT2G39970.1,TAIR:AT5G66380.1,TrEMBL:A9PF19,TrEMBL:D7UDJ6,TrEMBL:I1NCY8;Derives_from=GSCOCT00024437001;Name=Cc10_g00020;Ontology_term=CC_evidence_code:ISS,GO:0005488,GO:0006810,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Putative Mitochondrial substrate carrier family protein Q,CC_functional_completeness:complete,CC_gene:mcfQ,CC_gene:PMP47A,CC_gene:SLC25A17;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024437001~ Putative Mitochondrial substrate carrier family protein Q~ mcfQ~ complete;original_location=complement(join(16965..17045%2C16698..16805%2C16519..16593%2C13206..13336%2C12932..12986%2C12106..12255%2C11159..11227%2C10972..11079%2C10634..10702%2C8807..8861%2C7997..8187));owner=coffea | |
| 30573 chr10 manual_curation exon 7564 8187 . - . Parent=GSCOCT00024437001 | |
| 30574 chr10 manual_curation exon 8807 8861 . - . Parent=GSCOCT00024437001 | |
| 30575 chr10 manual_curation exon 10634 10702 . - . Parent=GSCOCT00024437001 | |
| 30576 chr10 manual_curation exon 10972 11079 . - . Parent=GSCOCT00024437001 | |
| 30577 chr10 manual_curation exon 11159 11227 . - . Parent=GSCOCT00024437001 | |
| 30578 chr10 manual_curation exon 12106 12255 . - . Parent=GSCOCT00024437001 | |
| 30579 chr10 manual_curation exon 12932 12986 . - . Parent=GSCOCT00024437001 | |
| 30580 chr10 manual_curation exon 13206 13336 . - . Parent=GSCOCT00024437001 | |
| 30581 chr10 manual_curation exon 16519 16593 . - . Parent=GSCOCT00024437001 | |
| 30582 chr10 manual_curation exon 16698 16805 . - . Parent=GSCOCT00024437001 | |
| 30583 chr10 manual_curation exon 16965 17105 . - . Parent=GSCOCT00024437001 | |
| 30584 chr10 manual_curation CDS 7997 8187 . - 1 Parent=GSCOCT00024437001 | |
| 30585 chr10 manual_curation CDS 8807 8861 . - 0 Parent=GSCOCT00024437001 | |
| 30586 chr10 manual_curation CDS 10634 10702 . - 0 Parent=GSCOCT00024437001 | |
| 30587 chr10 manual_curation CDS 10972 11079 . - 0 Parent=GSCOCT00024437001 | |
| 30588 chr10 manual_curation CDS 11159 11227 . - 0 Parent=GSCOCT00024437001 | |
| 30589 chr10 manual_curation CDS 12106 12255 . - 0 Parent=GSCOCT00024437001 | |
| 30590 chr10 manual_curation CDS 12932 12986 . - 2 Parent=GSCOCT00024437001 | |
| 30591 chr10 manual_curation CDS 13206 13336 . - 0 Parent=GSCOCT00024437001 | |
| 30592 chr10 manual_curation CDS 16519 16593 . - 0 Parent=GSCOCT00024437001 | |
| 30593 chr10 manual_curation CDS 16698 16805 . - 0 Parent=GSCOCT00024437001 | |
| 30594 chr10 manual_curation CDS 16965 17045 . - 0 Parent=GSCOCT00024437001 | |
| 30595 chr10 manual_curation gene 22453 33189 . + . ID=GSCOCG00024438001;Name=Cc10_g00030 | |
| 30596 chr10 manual_curation mRNA 22453 33189 . + . ID=GSCOCT00024438001;Parent=GSCOCG00024438001;Name=Cc10_g00030 | |
| 30597 chr10 manual_curation polypeptide 23024 32622 . + . ID=GSCOCP00024438001;Dbxref=GENE3D:G3DSA:1.10.287.110,InterPro:IPR001623,InterPro:IPR003095,InterPro:IPR018253,PFAM:PF00226,PRINTS:PR00625,PROFILE:PS50076,PROSITE:PS00636,SMART:SM00271,SUPERFAMILY:SSF46565,SwissProt:O59731,SwissProt:P39101,SwissProt:Q8GYX8,TAIR:AT1G21080.3,TAIR:AT1G76700.1,TAIR:AT1G77020.1,TrEMBL:B9H5Z8,TrEMBL:B9R8X2,TrEMBL:F6I6Y7;Derives_from=GSCOCT00024438001;Name=Cc10_g00030;Ontology_term=CC_evidence_code:ISS,GO:0006457,GO:0031072,GO:0051082,CC_EC_number:missing_EC_number,PRODUCT:Chaperone protein dnaJ 10,CC_functional_completeness:complete,CC_gene:ATJ10,CC_gene:CAJ1,CC_gene:SPBC3E7.11c;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024438001~ Chaperone protein dnaJ 10~ ATJ10~ complete;original_location=join(23024..23110%2C24829..24888%2C25277..25359%2C25502..25661%2C27684..27813%2C30379..30537%2C31244..31422%2C31511..31591%2C31747..31905%2C32527..32622);owner=coffea | |
| 30598 chr10 manual_curation exon 22453 22753 . + . Parent=GSCOCT00024438001 | |
| 30599 chr10 manual_curation exon 22876 23110 . + . Parent=GSCOCT00024438001 | |
| 30600 chr10 manual_curation exon 24829 24888 . + . Parent=GSCOCT00024438001 | |
| 30601 chr10 manual_curation exon 25277 25359 . + . Parent=GSCOCT00024438001 | |
| 30602 chr10 manual_curation exon 25502 25661 . + . Parent=GSCOCT00024438001 | |
| 30603 chr10 manual_curation exon 27684 27813 . + . Parent=GSCOCT00024438001 | |
| 30604 chr10 manual_curation exon 30379 30537 . + . Parent=GSCOCT00024438001 | |
| 30605 chr10 manual_curation exon 31244 31422 . + . Parent=GSCOCT00024438001 | |
| 30606 chr10 manual_curation exon 31511 31591 . + . Parent=GSCOCT00024438001 | |
| 30607 chr10 manual_curation exon 31747 31905 . + . Parent=GSCOCT00024438001 | |
| 30608 chr10 manual_curation exon 32527 33189 . + . Parent=GSCOCT00024438001 | |
| 30609 chr10 manual_curation CDS 23024 23110 . + 0 Parent=GSCOCT00024438001 | |
| 30610 chr10 manual_curation CDS 24829 24888 . + 0 Parent=GSCOCT00024438001 | |
| 30611 chr10 manual_curation CDS 25277 25359 . + 0 Parent=GSCOCT00024438001 | |
| 30612 chr10 manual_curation CDS 25502 25661 . + 2 Parent=GSCOCT00024438001 | |
| 30613 chr10 manual_curation CDS 27684 27813 . + 0 Parent=GSCOCT00024438001 | |
| 30614 chr10 manual_curation CDS 30379 30537 . + 1 Parent=GSCOCT00024438001 | |
| 30615 chr10 manual_curation CDS 31244 31422 . + 1 Parent=GSCOCT00024438001 | |
| 30616 chr10 manual_curation CDS 31511 31591 . + 0 Parent=GSCOCT00024438001 | |
| 30617 chr10 manual_curation CDS 31747 31905 . + 0 Parent=GSCOCT00024438001 | |
| 30618 chr10 manual_curation CDS 32527 32622 . + 0 Parent=GSCOCT00024438001 | |
| 30619 chr10 manual_curation gene 35463 40765 . + . ID=GSCOCG00024439001;Name=Cc10_g00040 | |
| 30620 chr10 manual_curation mRNA 35463 40765 . + . ID=GSCOCT00024439001;Parent=GSCOCG00024439001;Name=Cc10_g00040 | |
| 30621 chr10 manual_curation polypeptide 36277 40371 . + . ID=GSCOCP00024439001;Dbxref=InterPro:IPR004853,PFAM:PF03151,SwissProt:Q1JQ66,SwissProt:Q8RXL8,SwissProt:Q9SRE4,TAIR:AT1G21070.1,TAIR:AT1G76670.1,TAIR:AT5G42420.1,TrEMBL:D7UDJ2,TrEMBL:I1JB17,TrEMBL:I1LFM6;Derives_from=GSCOCT00024439001;Name=Cc10_g00040;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:UDP-galactose transporter 2,CC_functional_completeness:complete,CC_gene:UDP-GALT2,CC_gene:At1g06890,CC_gene:slc35e3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024439001~ UDP-galactose transporter 2~ UDP-GALT2~ complete;original_location=join(36277..36403%2C36830..37014%2C37896..38096%2C39757..39918%2C40015..40371);owner=coffea | |
| 30622 chr10 manual_curation exon 35463 36403 . + . Parent=GSCOCT00024439001 | |
| 30623 chr10 manual_curation exon 36830 37014 . + . Parent=GSCOCT00024439001 | |
| 30624 chr10 manual_curation exon 37896 38096 . + . Parent=GSCOCT00024439001 | |
| 30625 chr10 manual_curation exon 39757 39918 . + . Parent=GSCOCT00024439001 | |
| 30626 chr10 manual_curation exon 40015 40765 . + . Parent=GSCOCT00024439001 | |
| 30627 chr10 manual_curation CDS 36277 36403 . + 0 Parent=GSCOCT00024439001 | |
| 30628 chr10 manual_curation CDS 36830 37014 . + 1 Parent=GSCOCT00024439001 | |
| 30629 chr10 manual_curation CDS 37896 38096 . + 0 Parent=GSCOCT00024439001 | |
| 30630 chr10 manual_curation CDS 39757 39918 . + 0 Parent=GSCOCT00024439001 | |
| 30631 chr10 manual_curation CDS 40015 40371 . + 0 Parent=GSCOCT00024439001 | |
| 30632 chr10 manual_curation gene 46214 53931 . + . ID=GSCOCG00024440001;Name=Cc10_g00050 | |
| 30633 chr10 manual_curation mRNA 46214 53931 . + . ID=GSCOCT00024440001;Parent=GSCOCG00024440001;Name=Cc10_g00050 | |
| 30634 chr10 manual_curation polypeptide 47389 53380 . + . ID=GSCOCP00024440001;Dbxref=TAIR:AT5G25070.1,TrEMBL:B9GPK4,TrEMBL:B9R8X0,TrEMBL:F6I6Y5;Derives_from=GSCOCT00024440001;Name=Cc10_g00050;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024440001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=join(47389..47488%2C48217..49391%2C50651..51337%2C52796..53380);owner=coffea | |
| 30635 chr10 manual_curation exon 46214 47488 . + . Parent=GSCOCT00024440001 | |
| 30636 chr10 manual_curation exon 48217 49391 . + . Parent=GSCOCT00024440001 | |
| 30637 chr10 manual_curation exon 50651 51337 . + . Parent=GSCOCT00024440001 | |
| 30638 chr10 manual_curation exon 52796 53931 . + . Parent=GSCOCT00024440001 | |
| 30639 chr10 manual_curation CDS 47389 47488 . + 0 Parent=GSCOCT00024440001 | |
| 30640 chr10 manual_curation CDS 48217 49391 . + 1 Parent=GSCOCT00024440001 | |
| 30641 chr10 manual_curation CDS 50651 51337 . + 0 Parent=GSCOCT00024440001 | |
| 30642 chr10 manual_curation CDS 52796 53380 . + 0 Parent=GSCOCT00024440001 | |
| 30643 chr10 manual_curation gene 57032 64836 . + . ID=GSCOCG00024441001;Name=Cc10_g00060 | |
| 30644 chr10 manual_curation mRNA 57032 64836 . + . ID=GSCOCT00024441001;Parent=GSCOCG00024441001;Name=Cc10_g00060 | |
| 30645 chr10 manual_curation polypeptide 58041 64665 . + . ID=GSCOCP00024441001;Dbxref=InterPro:IPR001214,InterPro:IPR003169,InterPro:IPR003616,PFAM:PF00856,PFAM:PF02213,PROFILE:PS50280,PROFILE:PS50829,PROFILE:PS50868,SMART:SM00317,SMART:SM00508,SUPERFAMILY:SSF55277,SwissProt:Q08D57,SwissProt:Q1LY77,SwissProt:Q66J90,TAIR:AT1G05830.1,TAIR:AT2G31650.1,TAIR:AT5G42400.1,TrEMBL:B9GPK5,TrEMBL:B9R8W9,TrEMBL:G7IG27;Derives_from=GSCOCT00024441001;Name=Cc10_g00060;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.1.1.43,PRODUCT:Putative SET domain protein 25,CC_functional_completeness:fragment,CC_gene:setd1b,CC_gene:setd1ba;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024441001~ Putative SET domain protein 25~ setd1b~ fragment;original_location=join(58041..58204%2C58326..58869%2C59005..59118%2C59301..59624%2C59706..60047%2C60124..60348%2C60557..61045%2C61235..61628%2C61705..61854%2C61971..62401%2C62477..62599%2C62923..63003%2C63711..63764%2C63855..64006%2C64644..64665);owner=coffea | |
| 30646 chr10 manual_curation exon 64774 64836 . + . Parent=GSCOCT00024441001 | |
| 30647 chr10 manual_curation exon 57032 58204 . + . Parent=GSCOCT00024441001 | |
| 30648 chr10 manual_curation exon 58326 58869 . + . Parent=GSCOCT00024441001 | |
| 30649 chr10 manual_curation exon 59005 59118 . + . Parent=GSCOCT00024441001 | |
| 30650 chr10 manual_curation exon 59301 59624 . + . Parent=GSCOCT00024441001 | |
| 30651 chr10 manual_curation exon 59706 60047 . + . Parent=GSCOCT00024441001 | |
| 30652 chr10 manual_curation exon 60124 60348 . + . Parent=GSCOCT00024441001 | |
| 30653 chr10 manual_curation exon 60557 61045 . + . Parent=GSCOCT00024441001 | |
| 30654 chr10 manual_curation exon 61235 61628 . + . Parent=GSCOCT00024441001 | |
| 30655 chr10 manual_curation exon 61705 61854 . + . Parent=GSCOCT00024441001 | |
| 30656 chr10 manual_curation exon 61971 62401 . + . Parent=GSCOCT00024441001 | |
| 30657 chr10 manual_curation exon 62477 62599 . + . Parent=GSCOCT00024441001 | |
| 30658 chr10 manual_curation exon 62923 63003 . + . Parent=GSCOCT00024441001 | |
| 30659 chr10 manual_curation exon 63711 63764 . + . Parent=GSCOCT00024441001 | |
| 30660 chr10 manual_curation exon 63855 64006 . + . Parent=GSCOCT00024441001 | |
| 30661 chr10 manual_curation exon 64644 64687 . + . Parent=GSCOCT00024441001 | |
| 30662 chr10 manual_curation CDS 58041 58204 . + 0 Parent=GSCOCT00024441001 | |
| 30663 chr10 manual_curation CDS 58326 58869 . + 2 Parent=GSCOCT00024441001 | |
| 30664 chr10 manual_curation CDS 59005 59118 . + 0 Parent=GSCOCT00024441001 | |
| 30665 chr10 manual_curation CDS 59301 59624 . + 0 Parent=GSCOCT00024441001 | |
| 30666 chr10 manual_curation CDS 59706 60047 . + 0 Parent=GSCOCT00024441001 | |
| 30667 chr10 manual_curation CDS 60124 60348 . + 0 Parent=GSCOCT00024441001 | |
| 30668 chr10 manual_curation CDS 60557 61045 . + 0 Parent=GSCOCT00024441001 | |
| 30669 chr10 manual_curation CDS 61235 61628 . + 0 Parent=GSCOCT00024441001 | |
| 30670 chr10 manual_curation CDS 61705 61854 . + 1 Parent=GSCOCT00024441001 | |
| 30671 chr10 manual_curation CDS 61971 62401 . + 1 Parent=GSCOCT00024441001 | |
| 30672 chr10 manual_curation CDS 62477 62599 . + 0 Parent=GSCOCT00024441001 | |
| 30673 chr10 manual_curation CDS 62923 63003 . + 0 Parent=GSCOCT00024441001 | |
| 30674 chr10 manual_curation CDS 63711 63764 . + 0 Parent=GSCOCT00024441001 | |
| 30675 chr10 manual_curation CDS 63855 64006 . + 0 Parent=GSCOCT00024441001 | |
| 30676 chr10 manual_curation CDS 64644 64665 . + 2 Parent=GSCOCT00024441001 | |
| 30677 chr10 manual_curation gene 68100 76160 . - . ID=GSCOCG00024443001;Name=Cc10_g00070 | |
| 30678 chr10 manual_curation mRNA 68100 76160 . - . ID=GSCOCT00024443001;Parent=GSCOCG00024443001;Name=Cc10_g00070 | |
| 30679 chr10 manual_curation polypeptide 69198 75670 . - . ID=GSCOCP00024443001;Dbxref=GENE3D:G3DSA:2.60.120.460,InterPro:IPR001602,PFAM:PF01894,PIR:PIRSF004681,SUPERFAMILY:SSF111038,SwissProt:O14155,SwissProt:P0AF48,SwissProt:P0AF49,TAIR:AT1G21065.1,TIGRFAMs:TIGR00149,TrEMBL:B9R8W5,TrEMBL:F6I6Y1,TrEMBL:I1KM83;Derives_from=GSCOCT00024443001;Name=Cc10_g00070;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:UPF0047 protein yjbQ,CC_functional_completeness:complete,CC_gene:yjbQ,CC_gene:SPAC4A8.02c;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024443001~ UPF0047 protein yjbQ~ yjbQ~ complete;original_location=complement(join(75554..75670%2C74513..74573%2C71986..72080%2C71870..71903%2C70746..70800%2C70615..70657%2C69198..69269));owner=coffea | |
| 30680 chr10 manual_curation exon 68100 69269 . - . Parent=GSCOCT00024443001 | |
| 30681 chr10 manual_curation exon 70615 70657 . - . Parent=GSCOCT00024443001 | |
| 30682 chr10 manual_curation exon 70746 70800 . - . Parent=GSCOCT00024443001 | |
| 30683 chr10 manual_curation exon 71870 71903 . - . Parent=GSCOCT00024443001 | |
| 30684 chr10 manual_curation exon 71986 72080 . - . Parent=GSCOCT00024443001 | |
| 30685 chr10 manual_curation exon 74513 74573 . - . Parent=GSCOCT00024443001 | |
| 30686 chr10 manual_curation exon 75554 76160 . - . Parent=GSCOCT00024443001 | |
| 30687 chr10 manual_curation CDS 69198 69269 . - 0 Parent=GSCOCT00024443001 | |
| 30688 chr10 manual_curation CDS 70615 70657 . - 2 Parent=GSCOCT00024443001 | |
| 30689 chr10 manual_curation CDS 70746 70800 . - 1 Parent=GSCOCT00024443001 | |
| 30690 chr10 manual_curation CDS 71870 71903 . - 0 Parent=GSCOCT00024443001 | |
| 30691 chr10 manual_curation CDS 71986 72080 . - 1 Parent=GSCOCT00024443001 | |
| 30692 chr10 manual_curation CDS 74513 74573 . - 0 Parent=GSCOCT00024443001 | |
| 30693 chr10 manual_curation CDS 75554 75670 . - 0 Parent=GSCOCT00024443001 | |
| 30694 chr10 manual_curation gene 76581 82236 . + . ID=GSCOCG00024444001;Name=Cc10_g00080 | |
| 30695 chr10 manual_curation mRNA 76581 82236 . + . ID=GSCOCT00024444001;Parent=GSCOCG00024444001;Name=Cc10_g00080 | |
| 30696 chr10 manual_curation polypeptide 76933 81579 . + . ID=GSCOCP00024444001;Dbxref=InterPro:IPR018946,PFAM:PF09423,TAIR:AT5G42370.2,TrEMBL:B9H5Z1,TrEMBL:B9R8W4,TrEMBL:D7UDI2;Derives_from=GSCOCT00024444001;Name=Cc10_g00080;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Calcineurin-like metallo-phosphoesterase superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024444001~ Calcineurin-like metallo-phosphoesterase superfamily protein~ unknown_gene~ complete;original_location=join(76933..77133%2C77328..77555%2C77665..77786%2C77957..78017%2C78107..78247%2C79117..79224%2C79426..79654%2C79742..79993%2C81497..81579);owner=coffea | |
| 30697 chr10 manual_curation exon 76581 77133 . + . Parent=GSCOCT00024444001 | |
| 30698 chr10 manual_curation exon 77328 77555 . + . Parent=GSCOCT00024444001 | |
| 30699 chr10 manual_curation exon 77665 77786 . + . Parent=GSCOCT00024444001 | |
| 30700 chr10 manual_curation exon 77957 78017 . + . Parent=GSCOCT00024444001 | |
| 30701 chr10 manual_curation exon 78107 78247 . + . Parent=GSCOCT00024444001 | |
| 30702 chr10 manual_curation exon 79117 79224 . + . Parent=GSCOCT00024444001 | |
| 30703 chr10 manual_curation exon 79426 79654 . + . Parent=GSCOCT00024444001 | |
| 30704 chr10 manual_curation exon 79742 79993 . + . Parent=GSCOCT00024444001 | |
| 30705 chr10 manual_curation exon 81497 82236 . + . Parent=GSCOCT00024444001 | |
| 30706 chr10 manual_curation CDS 76933 77133 . + 0 Parent=GSCOCT00024444001 | |
| 30707 chr10 manual_curation CDS 77328 77555 . + 0 Parent=GSCOCT00024444001 | |
| 30708 chr10 manual_curation CDS 77665 77786 . + 0 Parent=GSCOCT00024444001 | |
| 30709 chr10 manual_curation CDS 77957 78017 . + 2 Parent=GSCOCT00024444001 | |
| 30710 chr10 manual_curation CDS 78107 78247 . + 0 Parent=GSCOCT00024444001 | |
| 30711 chr10 manual_curation CDS 79117 79224 . + 0 Parent=GSCOCT00024444001 | |
| 30712 chr10 manual_curation CDS 79426 79654 . + 0 Parent=GSCOCT00024444001 | |
| 30713 chr10 manual_curation CDS 79742 79993 . + 1 Parent=GSCOCT00024444001 | |
| 30714 chr10 manual_curation CDS 81497 81579 . + 1 Parent=GSCOCT00024444001 | |
| 30715 chr10 manual_curation gene 82645 99606 . - . ID=GSCOCG00024445001;Name=Cc10_g00090 | |
| 30716 chr10 manual_curation mRNA 82645 99606 . - . ID=GSCOCT00024445001;Parent=GSCOCG00024445001;Name=Cc10_g00090 | |
| 30717 chr10 manual_curation polypeptide 83074 99398 . - . ID=GSCOCP00024445001;Dbxref=GENE3D:G3DSA:1.25.40.10,InterPro:IPR001440,InterPro:IPR006869,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR019734,PFAM:PF00515,PFAM:PF04784,PROFILE:PS50005,PROFILE:PS50293,SMART:SM00028,SwissProt:O94474,SwissProt:Q6DFB8,SwissProt:Q6PGP7,TAIR:AT1G21060.1,TAIR:AT1G76620.1,TAIR:AT1G76630.2,TrEMBL:B9R8W2,TrEMBL:F6I6X8,TrEMBL:I1JB14;Derives_from=GSCOCT00024445001;Name=Cc10_g00090;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:Tetratricopeptide repeat (TPR)-like superfamily protein,CC_functional_completeness:modules,CC_gene:ttc37,CC_gene:TTC37,CC_gene:ski3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024445001~ Tetratricopeptide repeat (TPR)-like superfamily protein~ ttc37~ modules;original_location=complement(join(99301..99398%2C99086..99197%2C97426..97734%2C96903..97285%2C96540..96639%2C95703..95756%2C95522..95608%2C94687..94815%2C94266..94576%2C92949..92988%2C92700..92795%2C92210..92539%2C91992..92075%2C91810..91860%2C91385..91477%2C90728..90868%2C90544..90624%2C90108..90355%2C89861..90032%2C88961..89076%2C88806..88863%2C88441..88506%2C88093..88305%2C87915..87966%2C87173..87546%2C86960..87054%2C85523..85765%2C84533..85176%2C83952..84152%2C83074..83255));owner=coffea | |
| 30718 chr10 manual_curation exon 82645 83255 . - . Parent=GSCOCT00024445001 | |
| 30719 chr10 manual_curation exon 83952 84152 . - . Parent=GSCOCT00024445001 | |
| 30720 chr10 manual_curation exon 84533 85176 . - . Parent=GSCOCT00024445001 | |
| 30721 chr10 manual_curation exon 85523 85765 . - . Parent=GSCOCT00024445001 | |
| 30722 chr10 manual_curation exon 86960 87054 . - . Parent=GSCOCT00024445001 | |
| 30723 chr10 manual_curation exon 87173 87546 . - . Parent=GSCOCT00024445001 | |
| 30724 chr10 manual_curation exon 87915 87966 . - . Parent=GSCOCT00024445001 | |
| 30725 chr10 manual_curation exon 88093 88305 . - . Parent=GSCOCT00024445001 | |
| 30726 chr10 manual_curation exon 88441 88506 . - . Parent=GSCOCT00024445001 | |
| 30727 chr10 manual_curation exon 88806 88863 . - . Parent=GSCOCT00024445001 | |
| 30728 chr10 manual_curation exon 88961 89076 . - . Parent=GSCOCT00024445001 | |
| 30729 chr10 manual_curation exon 89861 90032 . - . Parent=GSCOCT00024445001 | |
| 30730 chr10 manual_curation exon 90108 90355 . - . Parent=GSCOCT00024445001 | |
| 30731 chr10 manual_curation exon 90544 90624 . - . Parent=GSCOCT00024445001 | |
| 30732 chr10 manual_curation exon 90728 90868 . - . Parent=GSCOCT00024445001 | |
| 30733 chr10 manual_curation exon 91385 91477 . - . Parent=GSCOCT00024445001 | |
| 30734 chr10 manual_curation exon 91810 91860 . - . Parent=GSCOCT00024445001 | |
| 30735 chr10 manual_curation exon 91992 92075 . - . Parent=GSCOCT00024445001 | |
| 30736 chr10 manual_curation exon 92210 92539 . - . Parent=GSCOCT00024445001 | |
| 30737 chr10 manual_curation exon 92700 92795 . - . Parent=GSCOCT00024445001 | |
| 30738 chr10 manual_curation exon 92949 92988 . - . Parent=GSCOCT00024445001 | |
| 30739 chr10 manual_curation exon 94266 94576 . - . Parent=GSCOCT00024445001 | |
| 30740 chr10 manual_curation exon 94687 94815 . - . Parent=GSCOCT00024445001 | |
| 30741 chr10 manual_curation exon 95522 95608 . - . Parent=GSCOCT00024445001 | |
| 30742 chr10 manual_curation exon 95703 95756 . - . Parent=GSCOCT00024445001 | |
| 30743 chr10 manual_curation exon 96540 96639 . - . Parent=GSCOCT00024445001 | |
| 30744 chr10 manual_curation exon 96903 97285 . - . Parent=GSCOCT00024445001 | |
| 30745 chr10 manual_curation exon 97426 97734 . - . Parent=GSCOCT00024445001 | |
| 30746 chr10 manual_curation exon 99086 99197 . - . Parent=GSCOCT00024445001 | |
| 30747 chr10 manual_curation exon 99301 99606 . - . Parent=GSCOCT00024445001 | |
| 30748 chr10 manual_curation CDS 83074 83255 . - 1 Parent=GSCOCT00024445001 | |
| 30749 chr10 manual_curation CDS 83952 84152 . - 1 Parent=GSCOCT00024445001 | |
| 30750 chr10 manual_curation CDS 84533 85176 . - 2 Parent=GSCOCT00024445001 | |
| 30751 chr10 manual_curation CDS 85523 85765 . - 2 Parent=GSCOCT00024445001 | |
| 30752 chr10 manual_curation CDS 86960 87054 . - 0 Parent=GSCOCT00024445001 | |
| 30753 chr10 manual_curation CDS 87173 87546 . - 1 Parent=GSCOCT00024445001 | |
| 30754 chr10 manual_curation CDS 87915 87966 . - 0 Parent=GSCOCT00024445001 | |
| 30755 chr10 manual_curation CDS 88093 88305 . - 0 Parent=GSCOCT00024445001 | |
| 30756 chr10 manual_curation CDS 88441 88506 . - 0 Parent=GSCOCT00024445001 | |
| 30757 chr10 manual_curation CDS 88806 88863 . - 2 Parent=GSCOCT00024445001 | |
| 30758 chr10 manual_curation CDS 88961 89076 . - 0 Parent=GSCOCT00024445001 | |
| 30759 chr10 manual_curation CDS 89861 90032 . - 2 Parent=GSCOCT00024445001 | |
| 30760 chr10 manual_curation CDS 90108 90355 . - 0 Parent=GSCOCT00024445001 | |
| 30761 chr10 manual_curation CDS 90544 90624 . - 0 Parent=GSCOCT00024445001 | |
| 30762 chr10 manual_curation CDS 90728 90868 . - 0 Parent=GSCOCT00024445001 | |
| 30763 chr10 manual_curation CDS 91385 91477 . - 0 Parent=GSCOCT00024445001 | |
| 30764 chr10 manual_curation CDS 91810 91860 . - 0 Parent=GSCOCT00024445001 | |
| 30765 chr10 manual_curation CDS 91992 92075 . - 0 Parent=GSCOCT00024445001 | |
| 30766 chr10 manual_curation CDS 92210 92539 . - 0 Parent=GSCOCT00024445001 | |
| 30767 chr10 manual_curation CDS 92700 92795 . - 0 Parent=GSCOCT00024445001 | |
| 30768 chr10 manual_curation CDS 92949 92988 . - 2 Parent=GSCOCT00024445001 | |
| 30769 chr10 manual_curation CDS 94266 94576 . - 0 Parent=GSCOCT00024445001 | |
| 30770 chr10 manual_curation CDS 94687 94815 . - 0 Parent=GSCOCT00024445001 | |
| 30771 chr10 manual_curation CDS 95522 95608 . - 0 Parent=GSCOCT00024445001 | |
| 30772 chr10 manual_curation CDS 95703 95756 . - 0 Parent=GSCOCT00024445001 | |
| 30773 chr10 manual_curation CDS 96540 96639 . - 2 Parent=GSCOCT00024445001 | |
| 30774 chr10 manual_curation CDS 96903 97285 . - 0 Parent=GSCOCT00024445001 | |
| 30775 chr10 manual_curation CDS 97426 97734 . - 0 Parent=GSCOCT00024445001 | |
| 30776 chr10 manual_curation CDS 99086 99197 . - 2 Parent=GSCOCT00024445001 | |
| 30777 chr10 manual_curation CDS 99301 99398 . - 0 Parent=GSCOCT00024445001 | |
| 30778 chr10 manual_curation gene 102888 104198 . + . ID=GSCOCG00024446001;Name=Cc10_g00100 | |
| 30779 chr10 manual_curation mRNA 102888 104198 . + . ID=GSCOCT00024446001;Parent=GSCOCG00024446001;Name=Cc10_g00100 | |
| 30780 chr10 manual_curation polypeptide 103513 103713 . + . ID=GSCOCP00024446001;Derives_from=GSCOCT00024446001;Name=Cc10_g00100;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024446001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=103513..103713;owner=coffea | |
| 30781 chr10 manual_curation exon 102888 104198 . + . Parent=GSCOCT00024446001 | |
| 30782 chr10 manual_curation CDS 103513 103713 . + 0 Parent=GSCOCT00024446001 | |
| 30783 chr10 manual_curation gene 108071 110168 . + . ID=GSCOCG00024447001;Name=Cc10_g00110 | |
| 30784 chr10 manual_curation mRNA 108071 110168 . + . ID=GSCOCT00024447001;Parent=GSCOCG00024447001;Name=Cc10_g00110 | |
| 30785 chr10 manual_curation polypeptide 108293 109358 . + . ID=GSCOCP00024447001;Dbxref=InterPro:IPR000433,InterPro:IPR011011,PFAM:PF00569,PROFILE:PS50135,SUPERFAMILY:SSF57903,TAIR:AT1G20990.1,TAIR:AT2G37800.1,TAIR:AT2G37820.1,TrEMBL:G7IA18,TrEMBL:I1KKM5,TrEMBL:I1ND02;Derives_from=GSCOCT00024447001;Name=Cc10_g00110;Ontology_term=CC_evidence_code:ISS,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Cysteine/Histidine-rich C1 domain family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024447001~ Cysteine/Histidine-rich C1 domain family protein~ unknown_gene~ complete;original_location=join(108293..108689%2C108808..109358);owner=coffea | |
| 30786 chr10 manual_curation exon 108071 108689 . + . Parent=GSCOCT00024447001 | |
| 30787 chr10 manual_curation exon 108808 110168 . + . Parent=GSCOCT00024447001 | |
| 30788 chr10 manual_curation CDS 108293 108689 . + 0 Parent=GSCOCT00024447001 | |
| 30789 chr10 manual_curation CDS 108808 109358 . + 1 Parent=GSCOCT00024447001 | |
| 30790 chr10 manual_curation gene 110231 117066 . - . ID=GSCOCG00024448001;Name=Cc10_g00120 | |
| 30791 chr10 manual_curation mRNA 110231 117066 . - . ID=GSCOCT00024448001;Parent=GSCOCG00024448001;Name=Cc10_g00120 | |
| 30792 chr10 manual_curation polypeptide 110785 116140 . - . ID=GSCOCP00024448001;Dbxref=GENE3D:G3DSA:4.10.1100.10,InterPro:IPR004333,InterPro:IPR020683,PFAM:PF03110,PROFILE:PS51141,SUPERFAMILY:SSF103612,SUPERFAMILY:SSF48403,SwissProt:Q6Z8M8,SwissProt:Q700C2,SwissProt:Q8RY95,TAIR:AT1G20980.1,TAIR:AT1G76580.1,TAIR:AT3G60030.1,TrEMBL:B9GPL8,TrEMBL:B9R8V3,TrEMBL:F6I6X1;Derives_from=GSCOCT00024448001;Name=Cc10_g00120;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0005634,CC_EC_number:missing_EC_number,PRODUCT:Putative Squamosa promoter-binding-like protein 14,CC_functional_completeness:complete,CC_gene:SPL14,CC_gene:SPL16,CC_gene:SPL15;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024448001~ Putative Squamosa promoter-binding-like protein 14~ SPL14~ complete;original_location=complement(join(115909..116140%2C115470..115773%2C115089..115282%2C113840..114699%2C113639..113713%2C113448..113555%2C113225..113342%2C112538..112673%2C112310..112451%2C111607..112209%2C110785..111210));owner=coffea | |
| 30793 chr10 manual_curation exon 116576 117066 . - . Parent=GSCOCT00024448001 | |
| 30794 chr10 manual_curation exon 110231 111210 . - . Parent=GSCOCT00024448001 | |
| 30795 chr10 manual_curation exon 111607 112209 . - . Parent=GSCOCT00024448001 | |
| 30796 chr10 manual_curation exon 112310 112451 . - . Parent=GSCOCT00024448001 | |
| 30797 chr10 manual_curation exon 112538 112673 . - . Parent=GSCOCT00024448001 | |
| 30798 chr10 manual_curation exon 113225 113342 . - . Parent=GSCOCT00024448001 | |
| 30799 chr10 manual_curation exon 113448 113555 . - . Parent=GSCOCT00024448001 | |
| 30800 chr10 manual_curation exon 113639 113713 . - . Parent=GSCOCT00024448001 | |
| 30801 chr10 manual_curation exon 113840 114699 . - . Parent=GSCOCT00024448001 | |
| 30802 chr10 manual_curation exon 115089 115282 . - . Parent=GSCOCT00024448001 | |
| 30803 chr10 manual_curation exon 115470 115773 . - . Parent=GSCOCT00024448001 | |
| 30804 chr10 manual_curation exon 115909 116193 . - . Parent=GSCOCT00024448001 | |
| 30805 chr10 manual_curation CDS 110785 111210 . - 0 Parent=GSCOCT00024448001 | |
| 30806 chr10 manual_curation CDS 111607 112209 . - 0 Parent=GSCOCT00024448001 | |
| 30807 chr10 manual_curation CDS 112310 112451 . - 2 Parent=GSCOCT00024448001 | |
| 30808 chr10 manual_curation CDS 112538 112673 . - 1 Parent=GSCOCT00024448001 | |
| 30809 chr10 manual_curation CDS 113225 113342 . - 0 Parent=GSCOCT00024448001 | |
| 30810 chr10 manual_curation CDS 113448 113555 . - 0 Parent=GSCOCT00024448001 | |
| 30811 chr10 manual_curation CDS 113639 113713 . - 0 Parent=GSCOCT00024448001 | |
| 30812 chr10 manual_curation CDS 113840 114699 . - 1 Parent=GSCOCT00024448001 | |
| 30813 chr10 manual_curation CDS 115089 115282 . - 2 Parent=GSCOCT00024448001 | |
| 30814 chr10 manual_curation CDS 115470 115773 . - 1 Parent=GSCOCT00024448001 | |
| 30815 chr10 manual_curation CDS 115909 116140 . - 0 Parent=GSCOCT00024448001 | |
| 30816 chr10 manual_curation gene 121208 127924 . - . ID=GSCOCG00024449001;Name=Cc10_g00130 | |
| 30817 chr10 manual_curation mRNA 121208 127924 . - . ID=GSCOCT00024449001;Parent=GSCOCG00024449001;Name=Cc10_g00130 | |
| 30818 chr10 manual_curation polypeptide 121459 127313 . - . ID=GSCOCP00024449001;Dbxref=TAIR:AT1G20970.1,TAIR:AT4G27500.1,TrEMBL:B9R8V2,TrEMBL:D7UDH2,TrEMBL:I1ND04;Derives_from=GSCOCT00024449001;Name=Cc10_g00130;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024449001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(124854..127313%2C124604..124762%2C124265..124444%2C123809..124003%2C122610..122708%2C121914..122525%2C121459..121821));owner=coffea | |
| 30819 chr10 manual_curation exon 127787 127924 . - . Parent=GSCOCT00024449001 | |
| 30820 chr10 manual_curation exon 121208 121821 . - . Parent=GSCOCT00024449001 | |
| 30821 chr10 manual_curation exon 121914 122525 . - . Parent=GSCOCT00024449001 | |
| 30822 chr10 manual_curation exon 122610 122708 . - . Parent=GSCOCT00024449001 | |
| 30823 chr10 manual_curation exon 123809 124003 . - . Parent=GSCOCT00024449001 | |
| 30824 chr10 manual_curation exon 124265 124444 . - . Parent=GSCOCT00024449001 | |
| 30825 chr10 manual_curation exon 124604 124762 . - . Parent=GSCOCT00024449001 | |
| 30826 chr10 manual_curation exon 124854 127393 . - . Parent=GSCOCT00024449001 | |
| 30827 chr10 manual_curation CDS 121459 121821 . - 0 Parent=GSCOCT00024449001 | |
| 30828 chr10 manual_curation CDS 121914 122525 . - 0 Parent=GSCOCT00024449001 | |
| 30829 chr10 manual_curation CDS 122610 122708 . - 0 Parent=GSCOCT00024449001 | |
| 30830 chr10 manual_curation CDS 123809 124003 . - 0 Parent=GSCOCT00024449001 | |
| 30831 chr10 manual_curation CDS 124265 124444 . - 0 Parent=GSCOCT00024449001 | |
| 30832 chr10 manual_curation CDS 124604 124762 . - 0 Parent=GSCOCT00024449001 | |
| 30833 chr10 manual_curation CDS 124854 127313 . - 0 Parent=GSCOCT00024449001 | |
| 30834 chr10 manual_curation gene 142396 146596 . - . ID=GSCOCG00024451001;Name=Cc10_g00140 | |
| 30835 chr10 manual_curation mRNA 142396 146596 . - . ID=GSCOCT00024451001;Parent=GSCOCG00024451001;Name=Cc10_g00140 | |
| 30836 chr10 manual_curation polypeptide 142488 146544 . - . ID=GSCOCP00024451001;Dbxref=InterPro:IPR001344,InterPro:IPR022796,PANTHER:PTHR21649,PFAM:PF00504,SwissProt:P07370,SwissProt:P12328,SwissProt:P14278,TAIR:AT1G76570.1,TAIR:AT2G05100.1,TAIR:AT3G27690.1,TrEMBL:B9H5X9,TrEMBL:C6TAC2,TrEMBL:D7KTV0;Derives_from=GSCOCT00024451001;Name=Cc10_g00140;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative Chlorophyll a-b binding protein 4%2C chloroplastic,CC_functional_completeness:complete,CC_gene:CAB4,CC_gene:CAB1B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024451001~ Putative Chlorophyll a-b binding protein 4%2C chloroplastic~ CAB4~ complete;original_location=complement(join(146395..146544%2C146081..146247%2C145572..145718%2C144910..145042%2C143843..143935%2C142488..142790));owner=coffea | |
| 30837 chr10 manual_curation exon 142396 142790 . - . Parent=GSCOCT00024451001 | |
| 30838 chr10 manual_curation exon 143843 143935 . - . Parent=GSCOCT00024451001 | |
| 30839 chr10 manual_curation exon 144910 145042 . - . Parent=GSCOCT00024451001 | |
| 30840 chr10 manual_curation exon 145572 145718 . - . Parent=GSCOCT00024451001 | |
| 30841 chr10 manual_curation exon 146081 146247 . - . Parent=GSCOCT00024451001 | |
| 30842 chr10 manual_curation exon 146395 146596 . - . Parent=GSCOCT00024451001 | |
| 30843 chr10 manual_curation CDS 142488 142790 . - 0 Parent=GSCOCT00024451001 | |
| 30844 chr10 manual_curation CDS 143843 143935 . - 0 Parent=GSCOCT00024451001 | |
| 30845 chr10 manual_curation CDS 144910 145042 . - 2 Parent=GSCOCT00024451001 | |
| 30846 chr10 manual_curation CDS 145572 145718 . - 2 Parent=GSCOCT00024451001 | |
| 30847 chr10 manual_curation CDS 146081 146247 . - 0 Parent=GSCOCT00024451001 | |
| 30848 chr10 manual_curation CDS 146395 146544 . - 0 Parent=GSCOCT00024451001 | |
| 30849 chr10 manual_curation gene 147215 148271 . - . ID=GSCOCG00024453001;Name=Cc10_g00150 | |
| 30850 chr10 manual_curation mRNA 147215 148271 . - . ID=GSCOCT00024453001;Parent=GSCOCG00024453001;Name=Cc10_g00150 | |
| 30851 chr10 manual_curation polypeptide 147215 148023 . - . ID=GSCOCP00024453001;Dbxref=InterPro:IPR003823,PFAM:PF02672,SwissProt:O22914,SwissProt:Q9C9K2,SwissProt:Q9LZP9,TAIR:AT1G76560.1,TAIR:AT2G47400.1,TAIR:AT3G62410.1,TrEMBL:B9GPM1,TrEMBL:B9R8V0,TrEMBL:D7KTU9;Derives_from=GSCOCT00024453001;Name=Cc10_g00150;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:CP12-3,CC_gene:CP12-1,CC_gene:CP12-2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024453001~ Hypothetical protein~ CP12-3~ missing_functional_completeness;original_location=complement(join(147973..148023%2C147818..147842%2C147215..147720));owner=coffea | |
| 30852 chr10 manual_curation exon 147215 147720 . - . Parent=GSCOCT00024453001 | |
| 30853 chr10 manual_curation exon 147818 147842 . - . Parent=GSCOCT00024453001 | |
| 30854 chr10 manual_curation exon 147973 148271 . - . Parent=GSCOCT00024453001 | |
| 30855 chr10 manual_curation CDS 147215 147720 . - 1 Parent=GSCOCT00024453001 | |
| 30856 chr10 manual_curation CDS 147818 147842 . - 0 Parent=GSCOCT00024453001 | |
| 30857 chr10 manual_curation CDS 147973 148023 . - 0 Parent=GSCOCT00024453001 | |
| 30858 chr10 manual_curation gene 158452 162898 . + . ID=GSCOCG00024454001;Name=Cc10_g00160 | |
| 30859 chr10 manual_curation mRNA 158452 162898 . + . ID=GSCOCT00024454001;Parent=GSCOCG00024454001;Name=Cc10_g00160 | |
| 30860 chr10 manual_curation polypeptide 158749 162667 . + . ID=GSCOCP00024454001;Dbxref=InterPro:IPR013212,InterPro:IPR015661,PANTHER:PTHR14030,PFAM:PF08311,SMART:SM00777,SwissProt:O60566,SwissProt:Q54CV5,SwissProt:Q9Z1S0,TAIR:AT2G20635.1,TAIR:AT2G33560.2,TAIR:AT5G05510.1,TrEMBL:B9H5X6,TrEMBL:B9R8U9,TrEMBL:D7UDG7;Derives_from=GSCOCT00024454001;Name=Cc10_g00160;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable inactive serine/threonine-protein kinase bub1,CC_functional_completeness:fragment,CC_gene:Bub1b,CC_gene:BUB1B,CC_gene:bub1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024454001~ Putative Probable inactive serine/threonine-protein kinase bub1~ Bub1b~ fragment;original_location=join(158749..158999%2C159193..159252%2C159578..159722%2C159842..159999%2C161196..161277%2C161357..161423%2C161497..161548%2C161925..162093%2C162178..162260%2C162440..162517%2C162604..162667);owner=coffea | |
| 30861 chr10 manual_curation exon 158452 158999 . + . Parent=GSCOCT00024454001 | |
| 30862 chr10 manual_curation exon 159193 159252 . + . Parent=GSCOCT00024454001 | |
| 30863 chr10 manual_curation exon 159578 159722 . + . Parent=GSCOCT00024454001 | |
| 30864 chr10 manual_curation exon 159842 159999 . + . Parent=GSCOCT00024454001 | |
| 30865 chr10 manual_curation exon 161196 161277 . + . Parent=GSCOCT00024454001 | |
| 30866 chr10 manual_curation exon 161357 161423 . + . Parent=GSCOCT00024454001 | |
| 30867 chr10 manual_curation exon 161497 161548 . + . Parent=GSCOCT00024454001 | |
| 30868 chr10 manual_curation exon 161925 162093 . + . Parent=GSCOCT00024454001 | |
| 30869 chr10 manual_curation exon 162178 162260 . + . Parent=GSCOCT00024454001 | |
| 30870 chr10 manual_curation exon 162440 162517 . + . Parent=GSCOCT00024454001 | |
| 30871 chr10 manual_curation exon 162604 162898 . + . Parent=GSCOCT00024454001 | |
| 30872 chr10 manual_curation CDS 158749 158999 . + 0 Parent=GSCOCT00024454001 | |
| 30873 chr10 manual_curation CDS 159193 159252 . + 2 Parent=GSCOCT00024454001 | |
| 30874 chr10 manual_curation CDS 159578 159722 . + 2 Parent=GSCOCT00024454001 | |
| 30875 chr10 manual_curation CDS 159842 159999 . + 0 Parent=GSCOCT00024454001 | |
| 30876 chr10 manual_curation CDS 161196 161277 . + 2 Parent=GSCOCT00024454001 | |
| 30877 chr10 manual_curation CDS 161357 161423 . + 0 Parent=GSCOCT00024454001 | |
| 30878 chr10 manual_curation CDS 161497 161548 . + 1 Parent=GSCOCT00024454001 | |
| 30879 chr10 manual_curation CDS 161925 162093 . + 2 Parent=GSCOCT00024454001 | |
| 30880 chr10 manual_curation CDS 162178 162260 . + 0 Parent=GSCOCT00024454001 | |
| 30881 chr10 manual_curation CDS 162440 162517 . + 2 Parent=GSCOCT00024454001 | |
| 30882 chr10 manual_curation CDS 162604 162667 . + 2 Parent=GSCOCT00024454001 | |
| 30883 chr10 manual_curation gene 163195 165025 . + . ID=GSCOCG00024455001;Name=Cc10_g00170 | |
| 30884 chr10 manual_curation mRNA 163195 165025 . + . ID=GSCOCT00024455001;Parent=GSCOCG00024455001;Name=Cc10_g00170 | |
| 30885 chr10 manual_curation polypeptide 163862 164725 . + . ID=GSCOCP00024455001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR000571,InterPro:IPR003954,InterPro:IPR009145,InterPro:IPR012677,PANTHER:PTHR12620,PFAM:PF00076,PFAM:PF00642,PRINTS:PR01848,PROFILE:PS50102,PROFILE:PS50103,SMART:SM00356,SMART:SM00361,SwissProt:Q9FMY5,SwissProt:Q9S709,SwissProt:Q9ZQW8,TAIR:AT1G10320.1,TAIR:AT1G27650.1,TAIR:AT5G42820.2,TrEMBL:B6T3Q5,TrEMBL:B6TRJ7,TrEMBL:B9H5X4;Derives_from=GSCOCT00024455001;Name=Cc10_g00170;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,GO:0003723,GO:0005634,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Splicing factor U2af small subunit B,CC_functional_completeness:complete,CC_gene:U2AF35B,CC_gene:U2AF35A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024455001~ Splicing factor U2af small subunit B~ U2AF35B~ complete;original_location=163862..164725;owner=coffea | |
| 30886 chr10 manual_curation exon 163195 165025 . + . Parent=GSCOCT00024455001 | |
| 30887 chr10 manual_curation CDS 163862 164725 . + 0 Parent=GSCOCT00024455001 | |
| 30888 chr10 manual_curation gene 182835 185857 . + . ID=GSCOCG00024459001;Name=Cc10_g00180 | |
| 30889 chr10 manual_curation mRNA 182835 185857 . + . ID=GSCOCT00024459001;Parent=GSCOCG00024459001;Name=Cc10_g00180 | |
| 30890 chr10 manual_curation polypeptide 183421 185312 . + . ID=GSCOCP00024459001;Dbxref=InterPro:IPR004827,InterPro:IPR011700,PFAM:PF07716,PROFILE:PS50217,PROSITE:PS00036,SMART:SM00338,SwissProt:Q9C7S0,TAIR:AT1G42990.1,TrEMBL:A7VKB4,TrEMBL:B2CM16,TrEMBL:Q3L0T7;Derives_from=GSCOCT00024459001;Name=Cc10_g00180;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0005634,GO:0043565,GO:0046983,CC_EC_number:missing_EC_number,PRODUCT:Putative BZIP transcription factor protein,CC_functional_completeness:fragment,CC_gene:BZIP60;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024459001~ Putative BZIP transcription factor protein~ BZIP60~ fragment;original_location=join(183421..183749%2C184120..184352%2C185008..185312);owner=coffea | |
| 30891 chr10 manual_curation exon 182835 183749 . + . Parent=GSCOCT00024459001 | |
| 30892 chr10 manual_curation exon 184120 184352 . + . Parent=GSCOCT00024459001 | |
| 30893 chr10 manual_curation exon 185008 185857 . + . Parent=GSCOCT00024459001 | |
| 30894 chr10 manual_curation CDS 183421 183749 . + 0 Parent=GSCOCT00024459001 | |
| 30895 chr10 manual_curation CDS 184120 184352 . + 2 Parent=GSCOCT00024459001 | |
| 30896 chr10 manual_curation CDS 185008 185312 . + 1 Parent=GSCOCT00024459001 | |
| 30897 chr10 manual_curation gene 201164 204768 . - . ID=GSCOCG00024463001;Name=Cc10_g00190 | |
| 30898 chr10 manual_curation mRNA 201164 204768 . - . ID=GSCOCT00024463001;Parent=GSCOCG00024463001;Name=Cc10_g00190 | |
| 30899 chr10 manual_curation polypeptide 201164 203278 . - . ID=GSCOCP00024463001;Dbxref=InterPro:IPR004776,PFAM:PF03547,TAIR:AT1G20925.1,TAIR:AT1G76520.1,TAIR:AT1G76530.1,TrEMBL:B9GPM7,TrEMBL:I1MMV2,TrEMBL:I1MMV3;Derives_from=GSCOCT00024463001;Name=Cc10_g00190;Ontology_term=CC_evidence_code:ISS,GO:0016021,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Auxin efflux carrier family protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024463001~ Auxin efflux carrier family protein~ unknown_gene~ fragment;original_location=complement(join(203144..203278%2C201823..201902%2C201583..201707%2C201164..201342));owner=coffea | |
| 30900 chr10 manual_curation exon 204162 204768 . - . Parent=GSCOCT00024463001 | |
| 30901 chr10 manual_curation exon 201164 201342 . - . Parent=GSCOCT00024463001 | |
| 30902 chr10 manual_curation exon 201583 201707 . - . Parent=GSCOCT00024463001 | |
| 30903 chr10 manual_curation exon 201823 201902 . - . Parent=GSCOCT00024463001 | |
| 30904 chr10 manual_curation exon 203144 203298 . - . Parent=GSCOCT00024463001 | |
| 30905 chr10 manual_curation CDS 201164 201342 . - 1 Parent=GSCOCT00024463001 | |
| 30906 chr10 manual_curation CDS 201583 201707 . - 2 Parent=GSCOCT00024463001 | |
| 30907 chr10 manual_curation CDS 201823 201902 . - 0 Parent=GSCOCT00024463001 | |
| 30908 chr10 manual_curation CDS 203144 203278 . - 0 Parent=GSCOCT00024463001 | |
| 30909 chr10 manual_curation gene 208039 215857 . + . ID=GSCOCG00024465001;Name=Cc10_g00200 | |
| 30910 chr10 manual_curation mRNA 208039 215857 . + . ID=GSCOCT00024465001;Parent=GSCOCG00024465001;Name=Cc10_g00200 | |
| 30911 chr10 manual_curation polypeptide 208983 215363 . + . ID=GSCOCP00024465001;Dbxref=GENE3D:G3DSA:1.10.150.60,InterPro:IPR001606,InterPro:IPR002068,InterPro:IPR008978,PFAM:PF00011,PFAM:PF01388,PROFILE:PS01031,PROFILE:PS51011,SMART:SM00501,SUPERFAMILY:SSF46774,SUPERFAMILY:SSF49764,SwissProt:C0SUW7,SwissProt:Q0WNR6,SwissProt:Q940Y3,TAIR:AT1G20910.1,TAIR:AT1G76510.3,TAIR:AT2G17410.1,TrEMBL:B9R8U2,TrEMBL:D7UDG1,TrEMBL:G3M3K3;Derives_from=GSCOCT00024465001;Name=Cc10_g00200;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0005622,CC_EC_number:missing_EC_number,PRODUCT:AT-rich interactive domain-containing protein 5,CC_functional_completeness:fragment,CC_gene:ARID5,CC_gene:ARID3,CC_gene:ARID6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024465001~ AT-rich interactive domain-containing protein 5~ ARID5~ fragment;original_location=join(208983..209036%2C209200..209330%2C209420..209459%2C210365..210417%2C210664..210709%2C211162..211254%2C212251..212373%2C212490..212541%2C212867..212939%2C213741..213807%2C213906..213956%2C214285..214377%2C215259..215363);owner=coffea | |
| 30912 chr10 manual_curation exon 208039 209036 . + . Parent=GSCOCT00024465001 | |
| 30913 chr10 manual_curation exon 209200 209330 . + . Parent=GSCOCT00024465001 | |
| 30914 chr10 manual_curation exon 209420 209459 . + . Parent=GSCOCT00024465001 | |
| 30915 chr10 manual_curation exon 210365 210417 . + . Parent=GSCOCT00024465001 | |
| 30916 chr10 manual_curation exon 210664 210709 . + . Parent=GSCOCT00024465001 | |
| 30917 chr10 manual_curation exon 211162 211254 . + . Parent=GSCOCT00024465001 | |
| 30918 chr10 manual_curation exon 212251 212373 . + . Parent=GSCOCT00024465001 | |
| 30919 chr10 manual_curation exon 212490 212541 . + . Parent=GSCOCT00024465001 | |
| 30920 chr10 manual_curation exon 212867 212939 . + . Parent=GSCOCT00024465001 | |
| 30921 chr10 manual_curation exon 213741 213807 . + . Parent=GSCOCT00024465001 | |
| 30922 chr10 manual_curation exon 213906 213956 . + . Parent=GSCOCT00024465001 | |
| 30923 chr10 manual_curation exon 214285 214377 . + . Parent=GSCOCT00024465001 | |
| 30924 chr10 manual_curation exon 215259 215857 . + . Parent=GSCOCT00024465001 | |
| 30925 chr10 manual_curation CDS 208983 209036 . + 0 Parent=GSCOCT00024465001 | |
| 30926 chr10 manual_curation CDS 209200 209330 . + 0 Parent=GSCOCT00024465001 | |
| 30927 chr10 manual_curation CDS 209420 209459 . + 2 Parent=GSCOCT00024465001 | |
| 30928 chr10 manual_curation CDS 210365 210417 . + 0 Parent=GSCOCT00024465001 | |
| 30929 chr10 manual_curation CDS 210664 210709 . + 2 Parent=GSCOCT00024465001 | |
| 30930 chr10 manual_curation CDS 211162 211254 . + 0 Parent=GSCOCT00024465001 | |
| 30931 chr10 manual_curation CDS 212251 212373 . + 0 Parent=GSCOCT00024465001 | |
| 30932 chr10 manual_curation CDS 212490 212541 . + 0 Parent=GSCOCT00024465001 | |
| 30933 chr10 manual_curation CDS 212867 212939 . + 1 Parent=GSCOCT00024465001 | |
| 30934 chr10 manual_curation CDS 213741 213807 . + 2 Parent=GSCOCT00024465001 | |
| 30935 chr10 manual_curation CDS 213906 213956 . + 0 Parent=GSCOCT00024465001 | |
| 30936 chr10 manual_curation CDS 214285 214377 . + 0 Parent=GSCOCT00024465001 | |
| 30937 chr10 manual_curation CDS 215259 215363 . + 0 Parent=GSCOCT00024465001 | |
| 30938 chr10 manual_curation gene 219422 220294 . - . ID=GSCOCG00024468001;Name=Cc10_g00210 | |
| 30939 chr10 manual_curation mRNA 219422 220294 . - . ID=GSCOCT00024468001;Parent=GSCOCG00024468001;Name=Cc10_g00210 | |
| 30940 chr10 manual_curation polypeptide 219639 220222 . - . ID=GSCOCP00024468001;Dbxref=TAIR:AT2G33585.1,TrEMBL:B9R8U0,TrEMBL:D7UDF9,TrEMBL:Q6Z8N4;Derives_from=GSCOCT00024468001;Name=Cc10_g00210;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B Has 31 Blast hits to 31 proteins in 12 species,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024468001~ unknown protein%3B Has 31 Blast hits to 31 proteins in 12 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 31%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ fragment;original_location=complement(join(220049..220222%2C219814..219888%2C219639..219692));owner=coffea | |
| 30941 chr10 manual_curation exon 219422 219692 . - . Parent=GSCOCT00024468001 | |
| 30942 chr10 manual_curation exon 219814 219888 . - . Parent=GSCOCT00024468001 | |
| 30943 chr10 manual_curation exon 220049 220294 . - . Parent=GSCOCT00024468001 | |
| 30944 chr10 manual_curation CDS 219639 219692 . - 0 Parent=GSCOCT00024468001 | |
| 30945 chr10 manual_curation CDS 219814 219888 . - 0 Parent=GSCOCT00024468001 | |
| 30946 chr10 manual_curation CDS 220049 220222 . - 0 Parent=GSCOCT00024468001 | |
| 30947 chr10 manual_curation gene 220738 221510 . + . ID=GSCOCG00024469001;Name=Cc10_g00220 | |
| 30948 chr10 manual_curation mRNA 220738 221510 . + . ID=GSCOCT00024469001;Parent=GSCOCG00024469001;Name=Cc10_g00220 | |
| 30949 chr10 manual_curation polypeptide 220738 221013 . + . ID=GSCOCP00024469001;Derives_from=GSCOCT00024469001;Name=Cc10_g00220;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024469001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=220738..221013;owner=coffea | |
| 30950 chr10 manual_curation exon 220738 221510 . + . Parent=GSCOCT00024469001 | |
| 30951 chr10 manual_curation CDS 220738 221013 . + 0 Parent=GSCOCT00024469001 | |
| 30952 chr10 manual_curation gene 221651 225360 . - . ID=GSCOCG00024470001;Name=Cc10_g00230 | |
| 30953 chr10 manual_curation mRNA 221651 225360 . - . ID=GSCOCT00024470001;Parent=GSCOCG00024470001;Name=Cc10_g00230 | |
| 30954 chr10 manual_curation polypeptide 221651 225100 . - . ID=GSCOCP00024470001;Dbxref=GENE3D:G3DSA:3.90.770.10,InterPro:IPR002202,InterPro:IPR004554,InterPro:IPR009023,InterPro:IPR009029,PANTHER:PTHR10572,PFAM:PF00368,PRINTS:PR00071,PROFILE:PS50065,PROSITE:PS00066,PROSITE:PS00318,PROSITE:PS01192,SUPERFAMILY:SSF55035,SUPERFAMILY:SSF56542,SwissProt:P14891,SwissProt:P29057,SwissProt:P48020,TAIR:AT1G76490.1,TAIR:AT2G17370.1,TIGRFAMs:TIGR00533,TrEMBL:B9GPN3,TrEMBL:B9R8T9,TrEMBL:Q5RZ62;Derives_from=GSCOCT00024470001;Name=Cc10_g00230;Ontology_term=CC_evidence_code:ISS,GO:0004420,GO:0008299,GO:0015936,GO:0016021,GO:0050661,GO:0050662,GO:0055114,CC_EC_number:1.1.1.34,PRODUCT:3-hydroxy-3-methylglutaryl-coenzyme A reductase 1,CC_functional_completeness:complete,CC_gene:HMGR1,CC_gene:HMG1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024470001~ 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1~ HMGR1~ complete;original_location=complement(join(224714..225100%2C224061..224605%2C223097..223293%2C222252..222598%2C221651..221893));owner=coffea | |
| 30955 chr10 manual_curation exon 221651 221893 . - . Parent=GSCOCT00024470001 | |
| 30956 chr10 manual_curation exon 222252 222598 . - . Parent=GSCOCT00024470001 | |
| 30957 chr10 manual_curation exon 223097 223293 . - . Parent=GSCOCT00024470001 | |
| 30958 chr10 manual_curation exon 224061 224605 . - . Parent=GSCOCT00024470001 | |
| 30959 chr10 manual_curation exon 224714 225360 . - . Parent=GSCOCT00024470001 | |
| 30960 chr10 manual_curation CDS 221651 221893 . - 0 Parent=GSCOCT00024470001 | |
| 30961 chr10 manual_curation CDS 222252 222598 . - 1 Parent=GSCOCT00024470001 | |
| 30962 chr10 manual_curation CDS 223097 223293 . - 2 Parent=GSCOCT00024470001 | |
| 30963 chr10 manual_curation CDS 224061 224605 . - 0 Parent=GSCOCT00024470001 | |
| 30964 chr10 manual_curation CDS 224714 225100 . - 0 Parent=GSCOCT00024470001 | |
| 30965 chr10 manual_curation gene 235761 240622 . + . ID=GSCOCG00024471001;Name=Cc10_g00240 | |
| 30966 chr10 manual_curation mRNA 235761 240622 . + . ID=GSCOCT00024471001;Parent=GSCOCG00024471001;Name=Cc10_g00240 | |
| 30967 chr10 manual_curation polypeptide 235841 239617 . + . ID=GSCOCP00024471001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR012677,PFAM:PF00076,PROFILE:PS50102,SMART:SM00360,SwissProt:Q5ZJX4,SwissProt:Q76LC6,SwissProt:Q9H0Z9,TAIR:AT1G20880.1,TAIR:AT1G22330.1,TAIR:AT1G76460.1,TrEMBL:B9H5W4,TrEMBL:F6I6W0,TrEMBL:I1K789;Derives_from=GSCOCT00024471001;Name=Cc10_g00240;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,CC_EC_number:missing_EC_number,PRODUCT:RNA-binding (RRM/RBD/RNP motifs) family protein,CC_functional_completeness:complete,CC_gene:RBM38,CC_gene:rbm24;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024471001~ RNA-binding (RRM/RBD/RNP motifs) family protein~ RBM38~ complete;original_location=join(235841..236092%2C236496..236619%2C237473..237602%2C238682..238718%2C238862..239099%2C239520..239617);owner=coffea | |
| 30968 chr10 manual_curation exon 239711 239809 . + . Parent=GSCOCT00024471001 | |
| 30969 chr10 manual_curation exon 240358 240622 . + . Parent=GSCOCT00024471001 | |
| 30970 chr10 manual_curation exon 235761 236092 . + . Parent=GSCOCT00024471001 | |
| 30971 chr10 manual_curation exon 236496 236619 . + . Parent=GSCOCT00024471001 | |
| 30972 chr10 manual_curation exon 237473 237602 . + . Parent=GSCOCT00024471001 | |
| 30973 chr10 manual_curation exon 238682 238718 . + . Parent=GSCOCT00024471001 | |
| 30974 chr10 manual_curation exon 238862 239099 . + . Parent=GSCOCT00024471001 | |
| 30975 chr10 manual_curation exon 239520 239630 . + . Parent=GSCOCT00024471001 | |
| 30976 chr10 manual_curation CDS 235841 236092 . + 0 Parent=GSCOCT00024471001 | |
| 30977 chr10 manual_curation CDS 236496 236619 . + 0 Parent=GSCOCT00024471001 | |
| 30978 chr10 manual_curation CDS 237473 237602 . + 1 Parent=GSCOCT00024471001 | |
| 30979 chr10 manual_curation CDS 238682 238718 . + 2 Parent=GSCOCT00024471001 | |
| 30980 chr10 manual_curation CDS 238862 239099 . + 0 Parent=GSCOCT00024471001 | |
| 30981 chr10 manual_curation CDS 239520 239617 . + 1 Parent=GSCOCT00024471001 | |
| 30982 chr10 manual_curation gene 243284 247356 . + . ID=GSCOCG00024473001;Name=Cc10_g00250 | |
| 30983 chr10 manual_curation mRNA 243284 247356 . + . ID=GSCOCT00024473001;Parent=GSCOCG00024473001;Name=Cc10_g00250 | |
| 30984 chr10 manual_curation polypeptide 243417 246951 . + . ID=GSCOCP00024473001;Dbxref=InterPro:IPR001005,InterPro:IPR007526,InterPro:IPR009057,InterPro:IPR014778,InterPro:IPR017884,PFAM:PF00249,PFAM:PF04433,PROFILE:PS50934,PROFILE:PS51293,SMART:SM00717,SUPERFAMILY:SSF46689,SwissProt:O13788,SwissProt:Q84JG2,SwissProt:Q8W475,TAIR:AT1G21700.1,TAIR:AT2G33610.1,TAIR:AT2G47620.1,TrEMBL:B9GPN7,TrEMBL:D7UDF2,TrEMBL:I1K790;Derives_from=GSCOCT00024473001;Name=Cc10_g00250;Ontology_term=CC_evidence_code:ISS,GO:0003677,CC_EC_number:missing_EC_number,PRODUCT:SWI/SNF complex subunit SWI3B,CC_functional_completeness:complete,CC_gene:SWI3B,CC_gene:ssr1,CC_gene:SWI3A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024473001~ SWI/SNF complex subunit SWI3B~ SWI3B~ complete;original_location=join(243417..243657%2C243886..244394%2C244679..245056%2C245443..245581%2C246503..246627%2C246769..246951);owner=coffea | |
| 30985 chr10 manual_curation exon 243284 243657 . + . Parent=GSCOCT00024473001 | |
| 30986 chr10 manual_curation exon 243886 244394 . + . Parent=GSCOCT00024473001 | |
| 30987 chr10 manual_curation exon 244679 245056 . + . Parent=GSCOCT00024473001 | |
| 30988 chr10 manual_curation exon 245443 245581 . + . Parent=GSCOCT00024473001 | |
| 30989 chr10 manual_curation exon 246503 246627 . + . Parent=GSCOCT00024473001 | |
| 30990 chr10 manual_curation exon 246769 247356 . + . Parent=GSCOCT00024473001 | |
| 30991 chr10 manual_curation CDS 243417 243657 . + 0 Parent=GSCOCT00024473001 | |
| 30992 chr10 manual_curation CDS 243886 244394 . + 1 Parent=GSCOCT00024473001 | |
| 30993 chr10 manual_curation CDS 244679 245056 . + 0 Parent=GSCOCT00024473001 | |
| 30994 chr10 manual_curation CDS 245443 245581 . + 0 Parent=GSCOCT00024473001 | |
| 30995 chr10 manual_curation CDS 246503 246627 . + 1 Parent=GSCOCT00024473001 | |
| 30996 chr10 manual_curation CDS 246769 246951 . + 0 Parent=GSCOCT00024473001 | |
| 30997 chr10 manual_curation gene 247744 251787 . - . ID=GSCOCG00024474001;Name=Cc10_g00260 | |
| 30998 chr10 manual_curation mRNA 247744 251787 . - . ID=GSCOCT00024474001;Parent=GSCOCG00024474001;Name=Cc10_g00260 | |
| 30999 chr10 manual_curation polypeptide 248551 251515 . - . ID=GSCOCP00024474001;Dbxref=GENE3D:G3DSA:3.40.1000.10,InterPro:IPR002683,InterPro:IPR016123,InterPro:IPR016124,PFAM:PF01789,SUPERFAMILY:SSF55724,SwissProt:Q9S720,TAIR:AT1G76450.1,TrEMBL:B2ZAQ2,TrEMBL:B9R8T4,TrEMBL:D7UDF1;Derives_from=GSCOCT00024474001;Name=Cc10_g00260;Ontology_term=CC_evidence_code:ISS,GO:0005509,GO:0009654,GO:0015979,GO:0019898,CC_EC_number:missing_EC_number,PRODUCT:PsbP domain-containing protein 3%2C chloroplastic,CC_functional_completeness:modules,CC_gene:PPD3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024474001~ PsbP domain-containing protein 3%2C chloroplastic~ PPD3~ modules;original_location=complement(join(251368..251515%2C251157..251235%2C250778..250941%2C250557..250628%2C249901..249981%2C249720..249802%2C249452..249527%2C249062..249180%2C248888..248932%2C248551..248577));owner=coffea | |
| 31000 chr10 manual_curation exon 247744 248577 . - . Parent=GSCOCT00024474001 | |
| 31001 chr10 manual_curation exon 248888 248932 . - . Parent=GSCOCT00024474001 | |
| 31002 chr10 manual_curation exon 249062 249180 . - . Parent=GSCOCT00024474001 | |
| 31003 chr10 manual_curation exon 249452 249527 . - . Parent=GSCOCT00024474001 | |
| 31004 chr10 manual_curation exon 249720 249802 . - . Parent=GSCOCT00024474001 | |
| 31005 chr10 manual_curation exon 249901 249981 . - . Parent=GSCOCT00024474001 | |
| 31006 chr10 manual_curation exon 250557 250628 . - . Parent=GSCOCT00024474001 | |
| 31007 chr10 manual_curation exon 250778 250941 . - . Parent=GSCOCT00024474001 | |
| 31008 chr10 manual_curation exon 251157 251235 . - . Parent=GSCOCT00024474001 | |
| 31009 chr10 manual_curation exon 251368 251787 . - . Parent=GSCOCT00024474001 | |
| 31010 chr10 manual_curation CDS 248551 248577 . - 0 Parent=GSCOCT00024474001 | |
| 31011 chr10 manual_curation CDS 248888 248932 . - 0 Parent=GSCOCT00024474001 | |
| 31012 chr10 manual_curation CDS 249062 249180 . - 1 Parent=GSCOCT00024474001 | |
| 31013 chr10 manual_curation CDS 249452 249527 . - 0 Parent=GSCOCT00024474001 | |
| 31014 chr10 manual_curation CDS 249720 249802 . - 1 Parent=GSCOCT00024474001 | |
| 31015 chr10 manual_curation CDS 249901 249981 . - 1 Parent=GSCOCT00024474001 | |
| 31016 chr10 manual_curation CDS 250557 250628 . - 1 Parent=GSCOCT00024474001 | |
| 31017 chr10 manual_curation CDS 250778 250941 . - 2 Parent=GSCOCT00024474001 | |
| 31018 chr10 manual_curation CDS 251157 251235 . - 1 Parent=GSCOCT00024474001 | |
| 31019 chr10 manual_curation CDS 251368 251515 . - 0 Parent=GSCOCT00024474001 | |
| 31020 chr10 manual_curation gene 252596 258921 . + . ID=GSCOCG00024475001;Name=Cc10_g00270 | |
| 31021 chr10 manual_curation mRNA 252596 258921 . + . ID=GSCOCT00024475001;Parent=GSCOCG00024475001;Name=Cc10_g00270 | |
| 31022 chr10 manual_curation polypeptide 253887 258387 . + . ID=GSCOCP00024475001;Dbxref=InterPro:IPR005175,InterPro:IPR017956,PFAM:PF03479,SMART:SM00384,TAIR:AT2G33620.1,TAIR:AT4G12080.1,TAIR:AT4G17950.1,TrEMBL:A5AT53,TrEMBL:B9R8T3,TrEMBL:D7UDF0;Derives_from=GSCOCT00024475001;Name=Cc10_g00270;Ontology_term=CC_evidence_code:ISS,GO:0003677,CC_EC_number:missing_EC_number,PRODUCT:AT hook motif DNA-binding family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024475001~ AT hook motif DNA-binding family protein~ unknown_gene~ complete;original_location=join(253887..254448%2C255657..255709%2C256569..256700%2C257251..257412%2C258169..258387);owner=coffea | |
| 31023 chr10 manual_curation exon 252596 254448 . + . Parent=GSCOCT00024475001 | |
| 31024 chr10 manual_curation exon 255657 255709 . + . Parent=GSCOCT00024475001 | |
| 31025 chr10 manual_curation exon 256569 256700 . + . Parent=GSCOCT00024475001 | |
| 31026 chr10 manual_curation exon 257251 257412 . + . Parent=GSCOCT00024475001 | |
| 31027 chr10 manual_curation exon 258169 258921 . + . Parent=GSCOCT00024475001 | |
| 31028 chr10 manual_curation CDS 253887 254448 . + 0 Parent=GSCOCT00024475001 | |
| 31029 chr10 manual_curation CDS 255657 255709 . + 1 Parent=GSCOCT00024475001 | |
| 31030 chr10 manual_curation CDS 256569 256700 . + 0 Parent=GSCOCT00024475001 | |
| 31031 chr10 manual_curation CDS 257251 257412 . + 0 Parent=GSCOCT00024475001 | |
| 31032 chr10 manual_curation CDS 258169 258387 . + 0 Parent=GSCOCT00024475001 | |
| 31033 chr10 manual_curation gene 259269 262632 . - . ID=GSCOCG00024476001;Name=Cc10_g00280 | |
| 31034 chr10 manual_curation mRNA 259269 262632 . - . ID=GSCOCT00024476001;Parent=GSCOCG00024476001;Name=Cc10_g00280 | |
| 31035 chr10 manual_curation polypeptide 259269 262302 . - . ID=GSCOCP00024476001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR002225,InterPro:IPR016040,PFAM:PF01073,SwissProt:Q32L94,SwissProt:Q4R7R1,SwissProt:Q8WUS8,TAIR:AT1G47290.2,TAIR:AT2G26260.1,TAIR:AT2G33630.1,TrEMBL:B9R8T2,TrEMBL:F6I6V9,TrEMBL:I1MY69;Derives_from=GSCOCT00024476001;Name=Cc10_g00280;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0003854,GO:0005488,GO:0006694,GO:0008152,CC_EC_number:1.1.1.170,PRODUCT:Putative Short-chain dehydrogenase/reductase family 42E member 1,CC_functional_completeness:modules,CC_gene:SDR42E1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024476001~ Putative Short-chain dehydrogenase/reductase family 42E member 1~ SDR42E1~ modules;original_location=complement(join(262113..262302%2C261407..261749%2C260718..260995%2C260322..260518%2C259269..259709));owner=coffea | |
| 31036 chr10 manual_curation exon 259269 259709 . - . Parent=GSCOCT00024476001 | |
| 31037 chr10 manual_curation exon 260322 260518 . - . Parent=GSCOCT00024476001 | |
| 31038 chr10 manual_curation exon 260718 260995 . - . Parent=GSCOCT00024476001 | |
| 31039 chr10 manual_curation exon 261407 261749 . - . Parent=GSCOCT00024476001 | |
| 31040 chr10 manual_curation exon 262113 262632 . - . Parent=GSCOCT00024476001 | |
| 31041 chr10 manual_curation CDS 259269 259709 . - 0 Parent=GSCOCT00024476001 | |
| 31042 chr10 manual_curation CDS 260322 260518 . - 1 Parent=GSCOCT00024476001 | |
| 31043 chr10 manual_curation CDS 260718 260995 . - 2 Parent=GSCOCT00024476001 | |
| 31044 chr10 manual_curation CDS 261407 261749 . - 1 Parent=GSCOCT00024476001 | |
| 31045 chr10 manual_curation CDS 262113 262302 . - 0 Parent=GSCOCT00024476001 | |
| 31046 chr10 manual_curation gene 262955 263926 . - . ID=GSCOCG00024477001;Name=Cc10_g00290 | |
| 31047 chr10 manual_curation mRNA 262955 263926 . - . ID=GSCOCT00024477001;Parent=GSCOCG00024477001;Name=Cc10_g00290 | |
| 31048 chr10 manual_curation polypeptide 263191 263591 . - . ID=GSCOCP00024477001;Dbxref=InterPro:IPR006121,PFAM:PF00403,SUPERFAMILY:SSF55008,TrEMBL:B9GPP0,TrEMBL:B9H5W1,TrEMBL:B9R8T1;Derives_from=GSCOCT00024477001;Name=Cc10_g00290;Ontology_term=CC_evidence_code:ISS,GO:0030001,GO:0046872,CC_EC_number:missing_EC_number,PRODUCT:Copper transport protein atox1%2C putative,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024477001~ Copper transport protein atox1%2C putative~ unknown_gene~ complete;original_location=complement(join(263540..263591%2C263191..263399));owner=coffea | |
| 31049 chr10 manual_curation exon 263787 263926 . - . Parent=GSCOCT00024477001 | |
| 31050 chr10 manual_curation exon 262955 263399 . - . Parent=GSCOCT00024477001 | |
| 31051 chr10 manual_curation exon 263540 263612 . - . Parent=GSCOCT00024477001 | |
| 31052 chr10 manual_curation CDS 263191 263399 . - 1 Parent=GSCOCT00024477001 | |
| 31053 chr10 manual_curation CDS 263540 263591 . - 0 Parent=GSCOCT00024477001 | |
| 31054 chr10 manual_curation gene 266345 266805 . + . ID=GSCOCG00024478001;Name=Cc10_g00300 | |
| 31055 chr10 manual_curation mRNA 266345 266805 . + . ID=GSCOCT00024478001;Parent=GSCOCG00024478001;Name=Cc10_g00300 | |
| 31056 chr10 manual_curation polypeptide 266345 266503 . + . ID=GSCOCP00024478001;Derives_from=GSCOCT00024478001;Name=Cc10_g00300;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024478001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=266345..266503;owner=coffea | |
| 31057 chr10 manual_curation exon 266345 266805 . + . Parent=GSCOCT00024478001 | |
| 31058 chr10 manual_curation CDS 266345 266503 . + 0 Parent=GSCOCT00024478001 | |
| 31059 chr10 manual_curation gene 272216 278431 . + . ID=GSCOCG00024479001;Name=Cc10_g00310 | |
| 31060 chr10 manual_curation mRNA 272216 278431 . + . ID=GSCOCT00024479001;Parent=GSCOCG00024479001;Name=Cc10_g00310 | |
| 31061 chr10 manual_curation polypeptide 273474 277899 . + . ID=GSCOCP00024479001;Dbxref=InterPro:IPR003663,InterPro:IPR005828,InterPro:IPR005829,InterPro:IPR016196,InterPro:IPR020846,PFAM:PF00083,PRINTS:PR00171,PROFILE:PS50850,PROSITE:PS00217,SUPERFAMILY:SSF103473,SwissProt:Q8LPQ8,SwissProt:Q96290,SwissProt:Q9SD00,TAIR:AT1G20840.1,TAIR:AT3G51490.2,TAIR:AT4G35300.1,TrEMBL:B9GPP7,TrEMBL:B9H5V3,TrEMBL:B9R8S3;Derives_from=GSCOCT00024479001;Name=Cc10_g00310;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006810,GO:0016020,GO:0016021,GO:0022891,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Monosaccharide-sensing protein 2,CC_functional_completeness:complete,CC_gene:MSSP2,CC_gene:MSSP3,CC_gene:MSSP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024479001~ Monosaccharide-sensing protein 2~ MSSP2~ complete;original_location=join(273474..273552%2C273828..274388%2C274751..275700%2C276491..276678%2C277464..277899);owner=coffea | |
| 31062 chr10 manual_curation exon 272216 273552 . + . Parent=GSCOCT00024479001 | |
| 31063 chr10 manual_curation exon 273828 274388 . + . Parent=GSCOCT00024479001 | |
| 31064 chr10 manual_curation exon 274751 275700 . + . Parent=GSCOCT00024479001 | |
| 31065 chr10 manual_curation exon 276491 276678 . + . Parent=GSCOCT00024479001 | |
| 31066 chr10 manual_curation exon 277464 278431 . + . Parent=GSCOCT00024479001 | |
| 31067 chr10 manual_curation CDS 273474 273552 . + 0 Parent=GSCOCT00024479001 | |
| 31068 chr10 manual_curation CDS 273828 274388 . + 1 Parent=GSCOCT00024479001 | |
| 31069 chr10 manual_curation CDS 274751 275700 . + 1 Parent=GSCOCT00024479001 | |
| 31070 chr10 manual_curation CDS 276491 276678 . + 0 Parent=GSCOCT00024479001 | |
| 31071 chr10 manual_curation CDS 277464 277899 . + 2 Parent=GSCOCT00024479001 | |
| 31072 chr10 manual_curation gene 278626 283053 . - . ID=GSCOCG00024480001;Name=Cc10_g00320 | |
| 31073 chr10 manual_curation mRNA 278626 283053 . - . ID=GSCOCT00024480001;Parent=GSCOCG00024480001;Name=Cc10_g00320 | |
| 31074 chr10 manual_curation polypeptide 279036 282039 . - . ID=GSCOCP00024480001;Dbxref=TAIR:AT1G20830.1,TrEMBL:B9GPP8,TrEMBL:B9R8S2,TrEMBL:D7UDD7;Derives_from=GSCOCT00024480001;Name=Cc10_g00320;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Predicted protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024480001~ Predicted protein~ unknown_gene~ modules;original_location=complement(join(281986..282039%2C281527..281844%2C280591..280757%2C279825..280212%2C279036..279218));owner=coffea | |
| 31075 chr10 manual_curation exon 278626 279218 . - . Parent=GSCOCT00024480001 | |
| 31076 chr10 manual_curation exon 279825 280212 . - . Parent=GSCOCT00024480001 | |
| 31077 chr10 manual_curation exon 280591 280757 . - . Parent=GSCOCT00024480001 | |
| 31078 chr10 manual_curation exon 281527 281844 . - . Parent=GSCOCT00024480001 | |
| 31079 chr10 manual_curation exon 281986 283053 . - . Parent=GSCOCT00024480001 | |
| 31080 chr10 manual_curation CDS 279036 279218 . - 0 Parent=GSCOCT00024480001 | |
| 31081 chr10 manual_curation CDS 279825 280212 . - 2 Parent=GSCOCT00024480001 | |
| 31082 chr10 manual_curation CDS 280591 280757 . - 0 Parent=GSCOCT00024480001 | |
| 31083 chr10 manual_curation CDS 281527 281844 . - 0 Parent=GSCOCT00024480001 | |
| 31084 chr10 manual_curation CDS 281986 282039 . - 0 Parent=GSCOCT00024480001 | |
| 31085 chr10 manual_curation gene 284328 287972 . + . ID=GSCOCG00024481001;Name=Cc10_g00330 | |
| 31086 chr10 manual_curation mRNA 284328 287972 . + . ID=GSCOCT00024481001;Parent=GSCOCG00024481001;Name=Cc10_g00330 | |
| 31087 chr10 manual_curation polypeptide 284486 287125 . + . ID=GSCOCP00024481001;Dbxref=TAIR:AT1G42550.1,TAIR:AT5G20610.1,TAIR:AT5G26160.1,TrEMBL:B9R8S5,TrEMBL:F6I6V1,TrEMBL:I1K5F5;Derives_from=GSCOCT00024481001;Name=Cc10_g00330;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:plastid movement impaired1,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024481001~ plastid movement impaired1~ unknown_gene~ complete;original_location=284486..287125;owner=coffea | |
| 31088 chr10 manual_curation exon 284328 287972 . + . Parent=GSCOCT00024481001 | |
| 31089 chr10 manual_curation CDS 284486 287125 . + 0 Parent=GSCOCT00024481001 | |
| 31090 chr10 manual_curation gene 294466 297117 . - . ID=GSCOCG00024484001;Name=Cc10_g00340 | |
| 31091 chr10 manual_curation mRNA 294466 297117 . - . ID=GSCOCT00024484001;Parent=GSCOCG00024484001;Name=Cc10_g00340 | |
| 31092 chr10 manual_curation polypeptide 294662 296941 . - . ID=GSCOCP00024484001;Dbxref=SwissProt:Q6ID99,SwissProt:Q9FPG2,SwissProt:Q9SM57,TAIR:AT1G20816.1,TAIR:AT1G76405.2,TrEMBL:B9H5V0,TrEMBL:C6T5V0,TrEMBL:D7UDD6;Derives_from=GSCOCT00024484001;Name=Cc10_g00340;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Outer envelope pore protein 21%2C chloroplastic,CC_functional_completeness:complete,CC_gene:OEP21,CC_gene:OEP21B,CC_gene:OEP21A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024484001~ Outer envelope pore protein 21%2C chloroplastic~ OEP21~ complete;original_location=complement(join(296849..296941%2C296654..296728%2C296312..296464%2C295913..296011%2C294662..294745));owner=coffea | |
| 31093 chr10 manual_curation exon 294466 294745 . - . Parent=GSCOCT00024484001 | |
| 31094 chr10 manual_curation exon 295913 296011 . - . Parent=GSCOCT00024484001 | |
| 31095 chr10 manual_curation exon 296312 296464 . - . Parent=GSCOCT00024484001 | |
| 31096 chr10 manual_curation exon 296654 296728 . - . Parent=GSCOCT00024484001 | |
| 31097 chr10 manual_curation exon 296849 297117 . - . Parent=GSCOCT00024484001 | |
| 31098 chr10 manual_curation CDS 294662 294745 . - 0 Parent=GSCOCT00024484001 | |
| 31099 chr10 manual_curation CDS 295913 296011 . - 0 Parent=GSCOCT00024484001 | |
| 31100 chr10 manual_curation CDS 296312 296464 . - 0 Parent=GSCOCT00024484001 | |
| 31101 chr10 manual_curation CDS 296654 296728 . - 0 Parent=GSCOCT00024484001 | |
| 31102 chr10 manual_curation CDS 296849 296941 . - 0 Parent=GSCOCT00024484001 | |
| 31103 chr10 manual_curation gene 297854 303260 . - . ID=GSCOCG00024485001;Name=Cc10_g00350 | |
| 31104 chr10 manual_curation mRNA 297854 303260 . - . ID=GSCOCT00024485001;Parent=GSCOCG00024485001;Name=Cc10_g00350 | |
| 31105 chr10 manual_curation polypeptide 298541 302889 . - . ID=GSCOCP00024485001;Dbxref=InterPro:IPR007676,PANTHER:PTHR21049,PFAM:PF04597,SwissProt:Q5RFB6,SwissProt:Q91YQ5,SwissProt:Q9GMB0,TAIR:AT1G76400.1,TAIR:AT2G01720.1,TrEMBL:D7UDD5,TrEMBL:I1JSS2,TrEMBL:I1K7A1;Derives_from=GSCOCT00024485001;Name=Cc10_g00350;Ontology_term=CC_evidence_code:ISS,GO:0004579,GO:0005783,GO:0006486,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Putative Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1,CC_functional_completeness:complete,CC_gene:RPN1,CC_gene:Rpn1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024485001~ Putative Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1~ RPN1~ complete;original_location=complement(join(302779..302889%2C302243..302287%2C301458..302092%2C301216..301363%2C300953..301129%2C300322..300390%2C300133..300222%2C299218..299376%2C298919..299143%2C298541..298732));owner=coffea | |
| 31106 chr10 manual_curation exon 297854 298732 . - . Parent=GSCOCT00024485001 | |
| 31107 chr10 manual_curation exon 298919 299143 . - . Parent=GSCOCT00024485001 | |
| 31108 chr10 manual_curation exon 299218 299376 . - . Parent=GSCOCT00024485001 | |
| 31109 chr10 manual_curation exon 300133 300222 . - . Parent=GSCOCT00024485001 | |
| 31110 chr10 manual_curation exon 300322 300390 . - . Parent=GSCOCT00024485001 | |
| 31111 chr10 manual_curation exon 300953 301129 . - . Parent=GSCOCT00024485001 | |
| 31112 chr10 manual_curation exon 301216 301363 . - . Parent=GSCOCT00024485001 | |
| 31113 chr10 manual_curation exon 301458 302092 . - . Parent=GSCOCT00024485001 | |
| 31114 chr10 manual_curation exon 302243 302287 . - . Parent=GSCOCT00024485001 | |
| 31115 chr10 manual_curation exon 302779 303260 . - . Parent=GSCOCT00024485001 | |
| 31116 chr10 manual_curation CDS 298541 298732 . - 0 Parent=GSCOCT00024485001 | |
| 31117 chr10 manual_curation CDS 298919 299143 . - 0 Parent=GSCOCT00024485001 | |
| 31118 chr10 manual_curation CDS 299218 299376 . - 0 Parent=GSCOCT00024485001 | |
| 31119 chr10 manual_curation CDS 300133 300222 . - 0 Parent=GSCOCT00024485001 | |
| 31120 chr10 manual_curation CDS 300322 300390 . - 0 Parent=GSCOCT00024485001 | |
| 31121 chr10 manual_curation CDS 300953 301129 . - 0 Parent=GSCOCT00024485001 | |
| 31122 chr10 manual_curation CDS 301216 301363 . - 2 Parent=GSCOCT00024485001 | |
| 31123 chr10 manual_curation CDS 301458 302092 . - 0 Parent=GSCOCT00024485001 | |
| 31124 chr10 manual_curation CDS 302243 302287 . - 0 Parent=GSCOCT00024485001 | |
| 31125 chr10 manual_curation CDS 302779 302889 . - 0 Parent=GSCOCT00024485001 | |
| 31126 chr10 manual_curation gene 305084 309162 . - . ID=GSCOCG00024486001;Name=Cc10_g00360 | |
| 31127 chr10 manual_curation mRNA 305084 309162 . - . ID=GSCOCT00024486001;Parent=GSCOCG00024486001;Name=Cc10_g00360 | |
| 31128 chr10 manual_curation polypeptide 305590 308849 . - . ID=GSCOCP00024486001;Dbxref=InterPro:IPR001179,PANTHER:PTHR10516,PFAM:PF00254,PROFILE:PS50059,SwissProt:Q9LM71,SwissProt:Q9SR70,TAIR:AT1G20810.1,TAIR:AT3G10060.1,TrEMBL:A5BH88,TrEMBL:D7UDD4,TrEMBL:G7J5Z0;Derives_from=GSCOCT00024486001;Name=Cc10_g00360;Ontology_term=CC_evidence_code:ISS,GO:0006457,CC_EC_number:missing_EC_number,PRODUCT:Peptidyl-prolyl cis-trans isomerase FKBP18%2C chloroplastic,CC_functional_completeness:complete,CC_gene:FKBP18,CC_gene:FKBP16-4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024486001~ Peptidyl-prolyl cis-trans isomerase FKBP18%2C chloroplastic~ FKBP18~ complete;original_location=complement(join(308597..308849%2C307032..307102%2C306870..306956%2C306588..306737%2C306379..306438%2C305590..305652));owner=coffea | |
| 31129 chr10 manual_curation exon 305084 305652 . - . Parent=GSCOCT00024486001 | |
| 31130 chr10 manual_curation exon 306379 306438 . - . Parent=GSCOCT00024486001 | |
| 31131 chr10 manual_curation exon 306588 306737 . - . Parent=GSCOCT00024486001 | |
| 31132 chr10 manual_curation exon 306870 306956 . - . Parent=GSCOCT00024486001 | |
| 31133 chr10 manual_curation exon 307032 307102 . - . Parent=GSCOCT00024486001 | |
| 31134 chr10 manual_curation exon 308597 309162 . - . Parent=GSCOCT00024486001 | |
| 31135 chr10 manual_curation CDS 305590 305652 . - 0 Parent=GSCOCT00024486001 | |
| 31136 chr10 manual_curation CDS 306379 306438 . - 0 Parent=GSCOCT00024486001 | |
| 31137 chr10 manual_curation CDS 306588 306737 . - 0 Parent=GSCOCT00024486001 | |
| 31138 chr10 manual_curation CDS 306870 306956 . - 0 Parent=GSCOCT00024486001 | |
| 31139 chr10 manual_curation CDS 307032 307102 . - 1 Parent=GSCOCT00024486001 | |
| 31140 chr10 manual_curation CDS 308597 308849 . - 0 Parent=GSCOCT00024486001 | |
| 31141 chr10 manual_curation gene 309941 316125 . - . ID=GSCOCG00024487001;Name=Cc10_g00370 | |
| 31142 chr10 manual_curation mRNA 309941 316125 . - . ID=GSCOCT00024487001;Parent=GSCOCG00024487001;Name=Cc10_g00370 | |
| 31143 chr10 manual_curation polypeptide 309941 316125 . - . ID=GSCOCP00024487001;Dbxref=InterPro:IPR004326,PFAM:PF03094,SwissProt:O22757,SwissProt:O22815,SwissProt:Q94KB4,TAIR:AT1G42560.1,TAIR:AT2G17480.1,TAIR:AT2G33670.1,TrEMBL:B9GPQ2,TrEMBL:D7SWC5,TrEMBL:F6I6U8;Derives_from=GSCOCT00024487001;Name=Cc10_g00370;Ontology_term=CC_evidence_code:ISS,GO:0008219,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:MLO-like protein 5,CC_functional_completeness:complete,CC_gene:MLO5,CC_gene:MLO8,CC_gene:MLO9;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024487001~ MLO-like protein 5~ MLO5~ complete;original_location=complement(join(316003..316125%2C315202..315259%2C314886..315091%2C313520..313636%2C313229..313286%2C312977..313065%2C311742..311816%2C311572..311660%2C311397..311446%2C311218..311258%2C310933..311106%2C310776..310811%2C310615..310682%2C310413..310473%2C309941..310273));owner=coffea | |
| 31144 chr10 manual_curation exon 309941 310273 . - . Parent=GSCOCT00024487001 | |
| 31145 chr10 manual_curation exon 310413 310473 . - . Parent=GSCOCT00024487001 | |
| 31146 chr10 manual_curation exon 310615 310682 . - . Parent=GSCOCT00024487001 | |
| 31147 chr10 manual_curation exon 310776 310811 . - . Parent=GSCOCT00024487001 | |
| 31148 chr10 manual_curation exon 310933 311106 . - . Parent=GSCOCT00024487001 | |
| 31149 chr10 manual_curation exon 311218 311258 . - . Parent=GSCOCT00024487001 | |
| 31150 chr10 manual_curation exon 311397 311446 . - . Parent=GSCOCT00024487001 | |
| 31151 chr10 manual_curation exon 311572 311660 . - . Parent=GSCOCT00024487001 | |
| 31152 chr10 manual_curation exon 311742 311816 . - . Parent=GSCOCT00024487001 | |
| 31153 chr10 manual_curation exon 312977 313065 . - . Parent=GSCOCT00024487001 | |
| 31154 chr10 manual_curation exon 313229 313286 . - . Parent=GSCOCT00024487001 | |
| 31155 chr10 manual_curation exon 313520 313636 . - . Parent=GSCOCT00024487001 | |
| 31156 chr10 manual_curation exon 314886 315091 . - . Parent=GSCOCT00024487001 | |
| 31157 chr10 manual_curation exon 315202 315259 . - . Parent=GSCOCT00024487001 | |
| 31158 chr10 manual_curation exon 316003 316125 . - . Parent=GSCOCT00024487001 | |
| 31159 chr10 manual_curation CDS 309941 310273 . - 0 Parent=GSCOCT00024487001 | |
| 31160 chr10 manual_curation CDS 310413 310473 . - 2 Parent=GSCOCT00024487001 | |
| 31161 chr10 manual_curation CDS 310615 310682 . - 0 Parent=GSCOCT00024487001 | |
| 31162 chr10 manual_curation CDS 310776 310811 . - 0 Parent=GSCOCT00024487001 | |
| 31163 chr10 manual_curation CDS 310933 311106 . - 0 Parent=GSCOCT00024487001 | |
| 31164 chr10 manual_curation CDS 311218 311258 . - 1 Parent=GSCOCT00024487001 | |
| 31165 chr10 manual_curation CDS 311397 311446 . - 2 Parent=GSCOCT00024487001 | |
| 31166 chr10 manual_curation CDS 311572 311660 . - 0 Parent=GSCOCT00024487001 | |
| 31167 chr10 manual_curation CDS 311742 311816 . - 0 Parent=GSCOCT00024487001 | |
| 31168 chr10 manual_curation CDS 312977 313065 . - 1 Parent=GSCOCT00024487001 | |
| 31169 chr10 manual_curation CDS 313229 313286 . - 0 Parent=GSCOCT00024487001 | |
| 31170 chr10 manual_curation CDS 313520 313636 . - 0 Parent=GSCOCT00024487001 | |
| 31171 chr10 manual_curation CDS 314886 315091 . - 1 Parent=GSCOCT00024487001 | |
| 31172 chr10 manual_curation CDS 315202 315259 . - 0 Parent=GSCOCT00024487001 | |
| 31173 chr10 manual_curation CDS 316003 316125 . - 0 Parent=GSCOCT00024487001 | |
| 31174 chr10 manual_curation gene 317052 323239 . - . ID=GSCOCG00024488001;Name=Cc10_g00380 | |
| 31175 chr10 manual_curation mRNA 317052 323239 . - . ID=GSCOCT00024488001;Parent=GSCOCG00024488001;Name=Cc10_g00380 | |
| 31176 chr10 manual_curation polypeptide 317390 322768 . - . ID=GSCOCP00024488001;Dbxref=InterPro:IPR001594,PFAM:PF01529,PROFILE:PS50216,SwissProt:Q6DR03,SwissProt:Q8L5Y5,SwissProt:Q9LIE4,TAIR:AT2G33640.1,TAIR:AT3G22180.1,TAIR:AT4G15080.1,TrEMBL:B9GPQ4,TrEMBL:B9R8R6,TrEMBL:F6I6U7;Derives_from=GSCOCT00024488001;Name=Cc10_g00380;Ontology_term=CC_evidence_code:ISS,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Probable S-acyltransferase At2g33640,CC_functional_completeness:complete,CC_gene:At2g33640,CC_gene:At4g15080,CC_gene:At3g22180;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024488001~ Probable S-acyltransferase At2g33640~ At2g33640~ complete;original_location=complement(join(322724..322768%2C321354..321467%2C321120..321240%2C320599..320786%2C320277..320345%2C319850..319921%2C319600..319728%2C319165..319245%2C318880..319086%2C317390..318319));owner=coffea | |
| 31177 chr10 manual_curation exon 322898 323239 . - . Parent=GSCOCT00024488001 | |
| 31178 chr10 manual_curation exon 317052 318319 . - . Parent=GSCOCT00024488001 | |
| 31179 chr10 manual_curation exon 318880 319086 . - . Parent=GSCOCT00024488001 | |
| 31180 chr10 manual_curation exon 319165 319245 . - . Parent=GSCOCT00024488001 | |
| 31181 chr10 manual_curation exon 319600 319728 . - . Parent=GSCOCT00024488001 | |
| 31182 chr10 manual_curation exon 319850 319921 . - . Parent=GSCOCT00024488001 | |
| 31183 chr10 manual_curation exon 320277 320345 . - . Parent=GSCOCT00024488001 | |
| 31184 chr10 manual_curation exon 320599 320786 . - . Parent=GSCOCT00024488001 | |
| 31185 chr10 manual_curation exon 321120 321240 . - . Parent=GSCOCT00024488001 | |
| 31186 chr10 manual_curation exon 321354 321467 . - . Parent=GSCOCT00024488001 | |
| 31187 chr10 manual_curation exon 322724 322811 . - . Parent=GSCOCT00024488001 | |
| 31188 chr10 manual_curation CDS 317390 318319 . - 0 Parent=GSCOCT00024488001 | |
| 31189 chr10 manual_curation CDS 318880 319086 . - 0 Parent=GSCOCT00024488001 | |
| 31190 chr10 manual_curation CDS 319165 319245 . - 0 Parent=GSCOCT00024488001 | |
| 31191 chr10 manual_curation CDS 319600 319728 . - 0 Parent=GSCOCT00024488001 | |
| 31192 chr10 manual_curation CDS 319850 319921 . - 0 Parent=GSCOCT00024488001 | |
| 31193 chr10 manual_curation CDS 320277 320345 . - 0 Parent=GSCOCT00024488001 | |
| 31194 chr10 manual_curation CDS 320599 320786 . - 1 Parent=GSCOCT00024488001 | |
| 31195 chr10 manual_curation CDS 321120 321240 . - 0 Parent=GSCOCT00024488001 | |
| 31196 chr10 manual_curation CDS 321354 321467 . - 0 Parent=GSCOCT00024488001 | |
| 31197 chr10 manual_curation CDS 322724 322768 . - 0 Parent=GSCOCT00024488001 | |
| 31198 chr10 manual_curation gene 327814 332876 . - . ID=GSCOCG00024489001;Name=Cc10_g00390 | |
| 31199 chr10 manual_curation mRNA 327814 332876 . - . ID=GSCOCT00024489001;Parent=GSCOCG00024489001;Name=Cc10_g00390 | |
| 31200 chr10 manual_curation polypeptide 327814 332876 . - . ID=GSCOCP00024489001;Dbxref=InterPro:IPR004326,PFAM:PF03094,SwissProt:A2YD22,SwissProt:O49873,SwissProt:Q0DC45,TAIR:AT1G11310.1,TAIR:AT1G61560.1,TAIR:AT2G39200.1,TrEMBL:B9R8R5,TrEMBL:I1JSS9,TrEMBL:I1K7A5;Derives_from=GSCOCT00024489001;Name=Cc10_g00390;Ontology_term=CC_evidence_code:ISS,GO:0008219,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:MLO protein homolog 1,CC_functional_completeness:complete,CC_gene:MLO-H1,CC_gene:MLO1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024489001~ MLO protein homolog 1~ MLO-H1~ complete;original_location=complement(join(332745..332876%2C332523..332580%2C332289..332379%2C332120..332210%2C331893..332009%2C331665..331725%2C331448..331533%2C330561..330635%2C330155..330243%2C330010..330059%2C329848..329888%2C329492..329665%2C329205..329240%2C328356..328484%2C327814..328203));owner=coffea | |
| 31201 chr10 manual_curation exon 327814 328203 . - . Parent=GSCOCT00024489001 | |
| 31202 chr10 manual_curation exon 328356 328484 . - . Parent=GSCOCT00024489001 | |
| 31203 chr10 manual_curation exon 329205 329240 . - . Parent=GSCOCT00024489001 | |
| 31204 chr10 manual_curation exon 329492 329665 . - . Parent=GSCOCT00024489001 | |
| 31205 chr10 manual_curation exon 329848 329888 . - . Parent=GSCOCT00024489001 | |
| 31206 chr10 manual_curation exon 330010 330059 . - . Parent=GSCOCT00024489001 | |
| 31207 chr10 manual_curation exon 330155 330243 . - . Parent=GSCOCT00024489001 | |
| 31208 chr10 manual_curation exon 330561 330635 . - . Parent=GSCOCT00024489001 | |
| 31209 chr10 manual_curation exon 331448 331533 . - . Parent=GSCOCT00024489001 | |
| 31210 chr10 manual_curation exon 331665 331725 . - . Parent=GSCOCT00024489001 | |
| 31211 chr10 manual_curation exon 331893 332009 . - . Parent=GSCOCT00024489001 | |
| 31212 chr10 manual_curation exon 332120 332210 . - . Parent=GSCOCT00024489001 | |
| 31213 chr10 manual_curation exon 332289 332379 . - . Parent=GSCOCT00024489001 | |
| 31214 chr10 manual_curation exon 332523 332580 . - . Parent=GSCOCT00024489001 | |
| 31215 chr10 manual_curation exon 332745 332876 . - . Parent=GSCOCT00024489001 | |
| 31216 chr10 manual_curation CDS 327814 328203 . - 0 Parent=GSCOCT00024489001 | |
| 31217 chr10 manual_curation CDS 328356 328484 . - 0 Parent=GSCOCT00024489001 | |
| 31218 chr10 manual_curation CDS 329205 329240 . - 0 Parent=GSCOCT00024489001 | |
| 31219 chr10 manual_curation CDS 329492 329665 . - 0 Parent=GSCOCT00024489001 | |
| 31220 chr10 manual_curation CDS 329848 329888 . - 1 Parent=GSCOCT00024489001 | |
| 31221 chr10 manual_curation CDS 330010 330059 . - 2 Parent=GSCOCT00024489001 | |
| 31222 chr10 manual_curation CDS 330155 330243 . - 0 Parent=GSCOCT00024489001 | |
| 31223 chr10 manual_curation CDS 330561 330635 . - 0 Parent=GSCOCT00024489001 | |
| 31224 chr10 manual_curation CDS 331448 331533 . - 1 Parent=GSCOCT00024489001 | |
| 31225 chr10 manual_curation CDS 331665 331725 . - 0 Parent=GSCOCT00024489001 | |
| 31226 chr10 manual_curation CDS 331893 332009 . - 0 Parent=GSCOCT00024489001 | |
| 31227 chr10 manual_curation CDS 332120 332210 . - 2 Parent=GSCOCT00024489001 | |
| 31228 chr10 manual_curation CDS 332289 332379 . - 1 Parent=GSCOCT00024489001 | |
| 31229 chr10 manual_curation CDS 332523 332580 . - 0 Parent=GSCOCT00024489001 | |
| 31230 chr10 manual_curation CDS 332745 332876 . - 0 Parent=GSCOCT00024489001 | |
| 31231 chr10 manual_curation gene 334323 338056 . + . ID=GSCOCG00024490001;Name=Cc10_g00400 | |
| 31232 chr10 manual_curation mRNA 334323 338056 . + . ID=GSCOCT00024490001;Parent=GSCOCG00024490001;Name=Cc10_g00400 | |
| 31233 chr10 manual_curation polypeptide 334503 337671 . + . ID=GSCOCP00024490001;Dbxref=TAIR:AT1G42960.1,TAIR:AT3G02900.1,TAIR:AT5G16660.1,TrEMBL:B9R8R4,TrEMBL:C6SZ03,TrEMBL:D7UDD0;Derives_from=GSCOCT00024490001;Name=Cc10_g00400;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:expressed protein localized to the inner membrane of the chloroplast.,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024490001~ expressed protein localized to the inner membrane of the chloroplast.~ unknown_gene~ complete;original_location=join(334503..334572%2C335997..336123%2C336624..336717%2C336914..337000%2C337537..337671);owner=coffea | |
| 31234 chr10 manual_curation exon 334323 334572 . + . Parent=GSCOCT00024490001 | |
| 31235 chr10 manual_curation exon 335997 336123 . + . Parent=GSCOCT00024490001 | |
| 31236 chr10 manual_curation exon 336624 336717 . + . Parent=GSCOCT00024490001 | |
| 31237 chr10 manual_curation exon 336914 337000 . + . Parent=GSCOCT00024490001 | |
| 31238 chr10 manual_curation exon 337537 338056 . + . Parent=GSCOCT00024490001 | |
| 31239 chr10 manual_curation CDS 334503 334572 . + 0 Parent=GSCOCT00024490001 | |
| 31240 chr10 manual_curation CDS 335997 336123 . + 1 Parent=GSCOCT00024490001 | |
| 31241 chr10 manual_curation CDS 336624 336717 . + 2 Parent=GSCOCT00024490001 | |
| 31242 chr10 manual_curation CDS 336914 337000 . + 0 Parent=GSCOCT00024490001 | |
| 31243 chr10 manual_curation CDS 337537 337671 . + 0 Parent=GSCOCT00024490001 | |
| 31244 chr10 manual_curation gene 339022 343122 . + . ID=GSCOCG00024491001;Name=Cc10_g00410 | |
| 31245 chr10 manual_curation mRNA 339022 343122 . + . ID=GSCOCT00024491001;Parent=GSCOCG00024491001;Name=Cc10_g00410 | |
| 31246 chr10 manual_curation polypeptide 339050 342696 . + . ID=GSCOCP00024491001;Dbxref=InterPro:IPR006424,InterPro:IPR020828,InterPro:IPR020829,InterPro:IPR020830,InterPro:IPR020831,PANTHER:PTHR10836,PFAM:PF00044,PFAM:PF02800,PRINTS:PR00078,PROSITE:PS00071,SMART:SM00846,SwissProt:P12859,SwissProt:P12860,SwissProt:P25857,TAIR:AT1G12900.1,TAIR:AT1G42970.1,TAIR:AT3G26650.1,TIGRFAMs:TIGR01534,TrEMBL:A5AX39,TrEMBL:H9U0F7,TrEMBL:I1K7A7;Derives_from=GSCOCT00024491001;Name=Cc10_g00410;Ontology_term=CC_evidence_code:ISS,GO:0006006,GO:0008943,GO:0051287,GO:0055114,CC_EC_number:1.2.1.13,PRODUCT:Glyceraldehyde-3-phosphate dehydrogenase B%2C chloroplastic,CC_functional_completeness:complete,CC_gene:GAPB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024491001~ Glyceraldehyde-3-phosphate dehydrogenase B%2C chloroplastic~ GAPB~ complete;original_location=join(339050..339160%2C339288..339407%2C340200..340361%2C340475..340642%2C341230..341390%2C341557..341618%2C341770..341819%2C341932..342338%2C342561..342696);owner=coffea | |
| 31247 chr10 manual_curation exon 339022 339160 . + . Parent=GSCOCT00024491001 | |
| 31248 chr10 manual_curation exon 339288 339407 . + . Parent=GSCOCT00024491001 | |
| 31249 chr10 manual_curation exon 340200 340361 . + . Parent=GSCOCT00024491001 | |
| 31250 chr10 manual_curation exon 340475 340642 . + . Parent=GSCOCT00024491001 | |
| 31251 chr10 manual_curation exon 341230 341390 . + . Parent=GSCOCT00024491001 | |
| 31252 chr10 manual_curation exon 341557 341618 . + . Parent=GSCOCT00024491001 | |
| 31253 chr10 manual_curation exon 341770 341819 . + . Parent=GSCOCT00024491001 | |
| 31254 chr10 manual_curation exon 341932 342338 . + . Parent=GSCOCT00024491001 | |
| 31255 chr10 manual_curation exon 342561 343122 . + . Parent=GSCOCT00024491001 | |
| 31256 chr10 manual_curation CDS 339050 339160 . + 0 Parent=GSCOCT00024491001 | |
| 31257 chr10 manual_curation CDS 339288 339407 . + 0 Parent=GSCOCT00024491001 | |
| 31258 chr10 manual_curation CDS 340200 340361 . + 0 Parent=GSCOCT00024491001 | |
| 31259 chr10 manual_curation CDS 340475 340642 . + 0 Parent=GSCOCT00024491001 | |
| 31260 chr10 manual_curation CDS 341230 341390 . + 0 Parent=GSCOCT00024491001 | |
| 31261 chr10 manual_curation CDS 341557 341618 . + 2 Parent=GSCOCT00024491001 | |
| 31262 chr10 manual_curation CDS 341770 341819 . + 1 Parent=GSCOCT00024491001 | |
| 31263 chr10 manual_curation CDS 341932 342338 . + 0 Parent=GSCOCT00024491001 | |
| 31264 chr10 manual_curation CDS 342561 342696 . + 2 Parent=GSCOCT00024491001 | |
| 31265 chr10 manual_curation gene 343893 349002 . + . ID=GSCOCG00024492001;Name=Cc10_g00420 | |
| 31266 chr10 manual_curation mRNA 343893 349002 . + . ID=GSCOCT00024492001;Parent=GSCOCG00024492001;Name=Cc10_g00420 | |
| 31267 chr10 manual_curation polypeptide 344178 348852 . + . ID=GSCOCP00024492001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR006567,InterPro:IPR008271,InterPro:IPR010513,InterPro:IPR011009,InterPro:IPR011047,InterPro:IPR017442,InterPro:IPR018391,InterPro:IPR020635,PFAM:PF00069,PFAM:PF06479,PROFILE:PS50011,PROFILE:PS51392,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SMART:SM00564,SMART:SM00580,SUPERFAMILY:SSF50998,SUPERFAMILY:SSF56112,SwissProt:P32361,SwissProt:Q09499,SwissProt:Q76MJ5,TAIR:AT2G17520.1,TAIR:AT3G11870.1,TAIR:AT5G24360.2,TrEMBL:B9GZ77,TrEMBL:F6H4D4,TrEMBL:F6I6U5;Derives_from=GSCOCT00024492001;Name=Cc10_g00420;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006397,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative inositol requiring 1-1,CC_functional_completeness:complete,CC_gene:ire-1,CC_gene:IRE1,CC_gene:ERN2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024492001~ Putative inositol requiring 1-1~ ire-1~ complete;original_location=join(344178..344347%2C345047..345281%2C345598..347087%2C347677..347849%2C347981..348227%2C348399..348852);owner=coffea | |
| 31268 chr10 manual_curation exon 343893 344347 . + . Parent=GSCOCT00024492001 | |
| 31269 chr10 manual_curation exon 345047 345281 . + . Parent=GSCOCT00024492001 | |
| 31270 chr10 manual_curation exon 345598 347087 . + . Parent=GSCOCT00024492001 | |
| 31271 chr10 manual_curation exon 347677 347849 . + . Parent=GSCOCT00024492001 | |
| 31272 chr10 manual_curation exon 347981 348227 . + . Parent=GSCOCT00024492001 | |
| 31273 chr10 manual_curation exon 348399 349002 . + . Parent=GSCOCT00024492001 | |
| 31274 chr10 manual_curation CDS 344178 344347 . + 0 Parent=GSCOCT00024492001 | |
| 31275 chr10 manual_curation CDS 345047 345281 . + 2 Parent=GSCOCT00024492001 | |
| 31276 chr10 manual_curation CDS 345598 347087 . + 0 Parent=GSCOCT00024492001 | |
| 31277 chr10 manual_curation CDS 347677 347849 . + 2 Parent=GSCOCT00024492001 | |
| 31278 chr10 manual_curation CDS 347981 348227 . + 1 Parent=GSCOCT00024492001 | |
| 31279 chr10 manual_curation CDS 348399 348852 . + 2 Parent=GSCOCT00024492001 | |
| 31280 chr10 manual_curation gene 350080 352290 . + . ID=GSCOCG00024493001;Name=Cc10_g00430 | |
| 31281 chr10 manual_curation mRNA 350080 352290 . + . ID=GSCOCT00024493001;Parent=GSCOCG00024493001;Name=Cc10_g00430 | |
| 31282 chr10 manual_curation polypeptide 350240 351906 . + . ID=GSCOCP00024493001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR000490,InterPro:IPR012946,InterPro:IPR013781,InterPro:IPR017853,PFAM:PF00332,PFAM:PF07983,SMART:SM00768,SUPERFAMILY:SSF51445,SwissProt:Q8VYE5,SwissProt:Q9FJU9,SwissProt:Q9M069,TAIR:AT4G26830.1,TAIR:AT5G24318.1,TAIR:AT5G56590.1,TrEMBL:A5BQU3,TrEMBL:B9GPQ8,TrEMBL:B9R8R1;Derives_from=GSCOCT00024493001;Name=Cc10_g00430;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0043169,CC_EC_number:3.2.1.39,PRODUCT:Putative Glucan endo-1%2C3-beta-glucosidase 13,CC_functional_completeness:complete,CC_gene:At5g56590,CC_gene:At4g29360,CC_gene:At4g34480;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024493001~ Putative Glucan endo-1%2C3-beta-glucosidase 13~ At5g56590~ complete;original_location=join(350240..351611%2C351875..351906);owner=coffea | |
| 31283 chr10 manual_curation exon 350080 351611 . + . Parent=GSCOCT00024493001 | |
| 31284 chr10 manual_curation exon 351875 352290 . + . Parent=GSCOCT00024493001 | |
| 31285 chr10 manual_curation CDS 350240 351611 . + 0 Parent=GSCOCT00024493001 | |
| 31286 chr10 manual_curation CDS 351875 351906 . + 1 Parent=GSCOCT00024493001 | |
| 31287 chr10 manual_curation gene 352433 357664 . - . ID=GSCOCG00024494001;Name=Cc10_g00440 | |
| 31288 chr10 manual_curation mRNA 352433 357664 . - . ID=GSCOCT00024494001;Parent=GSCOCG00024494001;Name=Cc10_g00440 | |
| 31289 chr10 manual_curation polypeptide 352778 356962 . - . ID=GSCOCP00024494001;Dbxref=InterPro:IPR001320,InterPro:IPR001638,InterPro:IPR001828,InterPro:IPR002455,InterPro:IPR015683,InterPro:IPR017103,PANTHER:PTHR18966,PFAM:PF00060,PFAM:PF00497,PFAM:PF01094,PIR:PIRSF037090,PRINTS:PR01176,SMART:SM00079,SwissProt:Q7XP59,SwissProt:Q93YT1,SwissProt:Q9C8E7,TAIR:AT1G42540.1,TAIR:AT3G51480.1,TAIR:AT4G35290.2,TrEMBL:A5BQU2,TrEMBL:B9R8R0,TrEMBL:D7UDC6;Derives_from=GSCOCT00024494001;Name=Cc10_g00440;Ontology_term=CC_evidence_code:ISS,GO:0004965,GO:0004970,GO:0005215,GO:0005234,GO:0006810,GO:0007186,GO:0016020,GO:0016021,GO:0030288,CC_EC_number:missing_EC_number,PRODUCT:Glutamate receptor 3.3,CC_functional_completeness:complete,CC_gene:GLR3.3,CC_gene:GLR3.1,CC_gene:GLR3.2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024494001~ Glutamate receptor 3.3~ GLR3.3~ complete;original_location=complement(join(356686..356962%2C354980..356322%2C354593..354870%2C354262..354293%2C353761..354167%2C352778..353212));owner=coffea | |
| 31290 chr10 manual_curation exon 352433 353212 . - . Parent=GSCOCT00024494001 | |
| 31291 chr10 manual_curation exon 353761 354167 . - . Parent=GSCOCT00024494001 | |
| 31292 chr10 manual_curation exon 354262 354293 . - . Parent=GSCOCT00024494001 | |
| 31293 chr10 manual_curation exon 354593 354870 . - . Parent=GSCOCT00024494001 | |
| 31294 chr10 manual_curation exon 354980 356322 . - . Parent=GSCOCT00024494001 | |
| 31295 chr10 manual_curation exon 356686 357664 . - . Parent=GSCOCT00024494001 | |
| 31296 chr10 manual_curation CDS 352778 353212 . - 0 Parent=GSCOCT00024494001 | |
| 31297 chr10 manual_curation CDS 353761 354167 . - 1 Parent=GSCOCT00024494001 | |
| 31298 chr10 manual_curation CDS 354262 354293 . - 2 Parent=GSCOCT00024494001 | |
| 31299 chr10 manual_curation CDS 354593 354870 . - 0 Parent=GSCOCT00024494001 | |
| 31300 chr10 manual_curation CDS 354980 356322 . - 1 Parent=GSCOCT00024494001 | |
| 31301 chr10 manual_curation CDS 356686 356962 . - 0 Parent=GSCOCT00024494001 | |
| 31302 chr10 manual_curation gene 358739 364778 . - . ID=GSCOCG00024495001;Name=Cc10_g00450 | |
| 31303 chr10 manual_curation mRNA 358739 364778 . - . ID=GSCOCT00024495001;Parent=GSCOCG00024495001;Name=Cc10_g00450 | |
| 31304 chr10 manual_curation polypeptide 358739 364778 . - . ID=GSCOCP00024495001;Dbxref=GENE3D:G3DSA:2.40.50.140,GENE3D:G3DSA:3.40.640.10,InterPro:IPR004839,InterPro:IPR012340,InterPro:IPR015421,InterPro:IPR015424,InterPro:IPR016027,PFAM:PF00155,SUPERFAMILY:SSF50249,SUPERFAMILY:SSF53383,SwissProt:B5YFU5,SwissProt:O66875,SwissProt:Q8XZC3,TAIR:AT5G04620.2,TrEMBL:D7TZC6,TrEMBL:I1JW06,TrEMBL:I1JW07;Derives_from=GSCOCT00024495001;Name=Cc10_g00450;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0009058,GO:0030170,CC_EC_number:2.3.1.29,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:bioF;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024495001~ Hypothetical protein~ bioF~ missing_functional_completeness;original_location=complement(join(364629..364778%2C361798..361976%2C361578..361702%2C361407..361485%2C361181..361316%2C360697..360879%2C360473..360602%2C360164..360178%2C359811..359953%2C359599..359706%2C358739..359182));owner=coffea | |
| 31305 chr10 manual_curation exon 358739 359182 . - . Parent=GSCOCT00024495001 | |
| 31306 chr10 manual_curation exon 359599 359706 . - . Parent=GSCOCT00024495001 | |
| 31307 chr10 manual_curation exon 359811 359953 . - . Parent=GSCOCT00024495001 | |
| 31308 chr10 manual_curation exon 360164 360178 . - . Parent=GSCOCT00024495001 | |
| 31309 chr10 manual_curation exon 360473 360602 . - . Parent=GSCOCT00024495001 | |
| 31310 chr10 manual_curation exon 360697 360879 . - . Parent=GSCOCT00024495001 | |
| 31311 chr10 manual_curation exon 361181 361316 . - . Parent=GSCOCT00024495001 | |
| 31312 chr10 manual_curation exon 361407 361485 . - . Parent=GSCOCT00024495001 | |
| 31313 chr10 manual_curation exon 361578 361702 . - . Parent=GSCOCT00024495001 | |
| 31314 chr10 manual_curation exon 361798 361976 . - . Parent=GSCOCT00024495001 | |
| 31315 chr10 manual_curation exon 364629 364778 . - . Parent=GSCOCT00024495001 | |
| 31316 chr10 manual_curation CDS 358739 359182 . - 0 Parent=GSCOCT00024495001 | |
| 31317 chr10 manual_curation CDS 359599 359706 . - 0 Parent=GSCOCT00024495001 | |
| 31318 chr10 manual_curation CDS 359811 359953 . - 1 Parent=GSCOCT00024495001 | |
| 31319 chr10 manual_curation CDS 360164 360178 . - 1 Parent=GSCOCT00024495001 | |
| 31320 chr10 manual_curation CDS 360473 360602 . - 0 Parent=GSCOCT00024495001 | |
| 31321 chr10 manual_curation CDS 360697 360879 . - 0 Parent=GSCOCT00024495001 | |
| 31322 chr10 manual_curation CDS 361181 361316 . - 2 Parent=GSCOCT00024495001 | |
| 31323 chr10 manual_curation CDS 361407 361485 . - 1 Parent=GSCOCT00024495001 | |
| 31324 chr10 manual_curation CDS 361578 361702 . - 2 Parent=GSCOCT00024495001 | |
| 31325 chr10 manual_curation CDS 361798 361976 . - 0 Parent=GSCOCT00024495001 | |
| 31326 chr10 manual_curation CDS 364629 364778 . - 0 Parent=GSCOCT00024495001 | |
| 31327 chr10 manual_curation gene 365049 372393 . - . ID=GSCOCG00024496001;Name=Cc10_g00460 | |
| 31328 chr10 manual_curation mRNA 365049 372393 . - . ID=GSCOCT00024496001;Parent=GSCOCG00024496001;Name=Cc10_g00460 | |
| 31329 chr10 manual_curation polypeptide 365049 372393 . - . ID=GSCOCP00024496001;Dbxref=InterPro:IPR010339,PFAM:PF06068,SwissProt:P60122,SwissProt:P60123,SwissProt:Q9C0X6,TAIR:AT3G49830.1,TAIR:AT5G22330.1,TAIR:AT5G67630.1,TrEMBL:D7SKY0,TrEMBL:I1KGM6,TrEMBL:I1KV60;Derives_from=GSCOCT00024496001;Name=Cc10_g00460;Ontology_term=CC_evidence_code:ISS,GO:0003678,GO:0005524,CC_EC_number:missing_EC_number,PRODUCT:RuvB-like helicase 1,CC_functional_completeness:fragment,CC_gene:rvb1,CC_gene:Ruvbl1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024496001~ RuvB-like helicase 1~ rvb1~ fragment;original_location=complement(join(372334..372393%2C365820..365885%2C365613..365735%2C365049..365114));owner=coffea | |
| 31330 chr10 manual_curation exon 365049 365114 . - . Parent=GSCOCT00024496001 | |
| 31331 chr10 manual_curation exon 365613 365735 . - . Parent=GSCOCT00024496001 | |
| 31332 chr10 manual_curation exon 365820 365885 . - . Parent=GSCOCT00024496001 | |
| 31333 chr10 manual_curation exon 372334 372393 . - . Parent=GSCOCT00024496001 | |
| 31334 chr10 manual_curation CDS 365049 365114 . - 0 Parent=GSCOCT00024496001 | |
| 31335 chr10 manual_curation CDS 365613 365735 . - 0 Parent=GSCOCT00024496001 | |
| 31336 chr10 manual_curation CDS 365820 365885 . - 0 Parent=GSCOCT00024496001 | |
| 31337 chr10 manual_curation CDS 372334 372393 . - 0 Parent=GSCOCT00024496001 | |
| 31338 chr10 manual_curation gene 375106 381323 . + . ID=GSCOCG00024497001;Name=Cc10_g00470 | |
| 31339 chr10 manual_curation mRNA 375106 381323 . + . ID=GSCOCT00024497001;Parent=GSCOCG00024497001;Name=Cc10_g00470 | |
| 31340 chr10 manual_curation polypeptide 376325 380857 . + . ID=GSCOCP00024497001;Dbxref=GENE3D:G3DSA:3.60.40.10,InterPro:IPR000222,InterPro:IPR001932,InterPro:IPR014045,InterPro:IPR015655,PANTHER:PTHR13832,PFAM:PF00481,PROSITE:PS01032,SMART:SM00331,SMART:SM00332,SUPERFAMILY:SSF81606,SwissProt:P93006,SwissProt:Q69VD9,SwissProt:Q9SD02,TAIR:AT2G25620.1,TAIR:AT2G33700.1,TAIR:AT3G51470.1,TrEMBL:B9H5K2,TrEMBL:B9R8Q9,TrEMBL:F6I6U3;Derives_from=GSCOCT00024497001;Name=Cc10_g00470;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004722,GO:0006470,GO:0008287,CC_EC_number:3.1.3.16,PRODUCT:Probable protein phosphatase 2C 27,CC_functional_completeness:complete,CC_gene:At2g33700,CC_gene:At3g51470,CC_gene:Os06g0597200;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024497001~ Probable protein phosphatase 2C 27~ At2g33700~ complete;original_location=join(376325..376549%2C377479..377673%2C378219..378424%2C380305..380857);owner=coffea | |
| 31341 chr10 manual_curation exon 375106 376549 . + . Parent=GSCOCT00024497001 | |
| 31342 chr10 manual_curation exon 377479 377673 . + . Parent=GSCOCT00024497001 | |
| 31343 chr10 manual_curation exon 378219 378424 . + . Parent=GSCOCT00024497001 | |
| 31344 chr10 manual_curation exon 380305 381323 . + . Parent=GSCOCT00024497001 | |
| 31345 chr10 manual_curation CDS 376325 376549 . + 0 Parent=GSCOCT00024497001 | |
| 31346 chr10 manual_curation CDS 377479 377673 . + 0 Parent=GSCOCT00024497001 | |
| 31347 chr10 manual_curation CDS 378219 378424 . + 0 Parent=GSCOCT00024497001 | |
| 31348 chr10 manual_curation CDS 380305 380857 . + 2 Parent=GSCOCT00024497001 | |
| 31349 chr10 manual_curation gene 384056 386138 . + . ID=GSCOCG00024499001;Name=Cc10_g00480 | |
| 31350 chr10 manual_curation mRNA 384056 386138 . + . ID=GSCOCT00024499001;Parent=GSCOCG00024499001;Name=Cc10_g00480 | |
| 31351 chr10 manual_curation polypeptide 384056 385780 . + . ID=GSCOCP00024499001;Dbxref=GENE3D:G3DSA:2.120.10.80,InterPro:IPR001810,InterPro:IPR006652,InterPro:IPR011043,InterPro:IPR015915,PFAM:PF00646,PROFILE:PS50181,SMART:SM00256,SMART:SM00612,SUPERFAMILY:SSF50965,SwissProt:Q9FII1,SwissProt:Q9FII2,TAIR:AT5G42350.1,TAIR:AT5G42360.1,TrEMBL:B9H5J9,TrEMBL:B9R8Q7,TrEMBL:F6I6U2;Derives_from=GSCOCT00024499001;Name=Cc10_g00480;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:F-box/kelch-repeat protein At5g42350,CC_functional_completeness:complete,CC_gene:At5g42350,CC_gene:At5g42360;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024499001~ F-box/kelch-repeat protein At5g42350~ At5g42350~ complete;original_location=384056..385780;owner=coffea | |
| 31352 chr10 manual_curation exon 384056 386138 . + . Parent=GSCOCT00024499001 | |
| 31353 chr10 manual_curation CDS 384056 385780 . + 0 Parent=GSCOCT00024499001 | |
| 31354 chr10 manual_curation gene 386309 391935 . - . ID=GSCOCG00024500001;Name=Cc10_g00490 | |
| 31355 chr10 manual_curation mRNA 386309 391935 . - . ID=GSCOCT00024500001;Parent=GSCOCG00024500001;Name=Cc10_g00490 | |
| 31356 chr10 manual_curation polypeptide 387151 390415 . - . ID=GSCOCP00024500001;Dbxref=GENE3D:G3DSA:1.25.10.10,InterPro:IPR000225,InterPro:IPR003613,InterPro:IPR011989,InterPro:IPR016024,PFAM:PF04564,SMART:SM00185,SMART:SM00504,SUPERFAMILY:SSF48371,SwissProt:Q9CAA7,SwissProt:Q9LM76,SwissProt:Q9SFX2,TAIR:AT1G20780.1,TAIR:AT1G68940.3,TAIR:AT1G76390.1,TrEMBL:B9NDM5,TrEMBL:B9R8Q6,TrEMBL:F6I6U1;Derives_from=GSCOCT00024500001;Name=Cc10_g00490;Ontology_term=CC_evidence_code:ISS,GO:0000151,GO:0004842,GO:0005488,GO:0016567,CC_EC_number:missing_EC_number,PRODUCT:U-box domain-containing protein 43,CC_functional_completeness:complete,CC_gene:PUB43,CC_gene:PUB44,CC_gene:PUB42;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024500001~ U-box domain-containing protein 43~ PUB43~ complete;original_location=complement(join(389861..390415%2C389457..389766%2C387151..388727));owner=coffea | |
| 31357 chr10 manual_curation exon 391483 391935 . - . Parent=GSCOCT00024500001 | |
| 31358 chr10 manual_curation exon 386309 388727 . - . Parent=GSCOCT00024500001 | |
| 31359 chr10 manual_curation exon 389457 389766 . - . Parent=GSCOCT00024500001 | |
| 31360 chr10 manual_curation exon 389861 390432 . - . Parent=GSCOCT00024500001 | |
| 31361 chr10 manual_curation CDS 387151 388727 . - 1 Parent=GSCOCT00024500001 | |
| 31362 chr10 manual_curation CDS 389457 389766 . - 0 Parent=GSCOCT00024500001 | |
| 31363 chr10 manual_curation CDS 389861 390415 . - 0 Parent=GSCOCT00024500001 | |
| 31364 chr10 manual_curation gene 393240 400911 . - . ID=GSCOCG00024501001;Name=Cc10_g00500 | |
| 31365 chr10 manual_curation mRNA 393240 400911 . - . ID=GSCOCT00024501001;Parent=GSCOCG00024501001;Name=Cc10_g00500 | |
| 31366 chr10 manual_curation polypeptide 393688 400911 . - . ID=GSCOCP00024501001;Dbxref=GENE3D:G3DSA:1.10.238.10,InterPro:IPR000261,InterPro:IPR002048,InterPro:IPR011992,InterPro:IPR018247,InterPro:IPR018249,PROFILE:PS50031,PROFILE:PS50222,PROSITE:PS00018,SMART:SM00027,SMART:SM00054,SwissProt:O54916,SwissProt:Q96D71,SwissProt:Q9HGL2,TAIR:AT1G20760.1,TAIR:AT1G21630.2,TAIR:AT4G05520.1,TrEMBL:B9GPR9,TrEMBL:B9R8Q3,TrEMBL:F6I6U0;Derives_from=GSCOCT00024501001;Name=Cc10_g00500;Ontology_term=CC_evidence_code:ISS,GO:0005509,CC_EC_number:missing_EC_number,PRODUCT:Putative Calcium-binding EF hand family protein,CC_functional_completeness:complete,CC_gene:SPBC800.10c,CC_gene:REPS1,CC_gene:Reps1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024501001~ Putative Calcium-binding EF hand family protein~ SPBC800.10c~ complete;original_location=complement(join(400765..400911%2C398831..399920%2C398402..398620%2C398093..398316%2C397271..397345%2C397065..397136%2C396871..396969%2C396396..396467%2C396196..396310%2C395246..395314%2C394847..395144%2C394662..394737%2C393688..394119));owner=coffea | |
| 31367 chr10 manual_curation exon 393240 394119 . - . Parent=GSCOCT00024501001 | |
| 31368 chr10 manual_curation exon 394662 394737 . - . Parent=GSCOCT00024501001 | |
| 31369 chr10 manual_curation exon 394847 395144 . - . Parent=GSCOCT00024501001 | |
| 31370 chr10 manual_curation exon 395246 395314 . - . Parent=GSCOCT00024501001 | |
| 31371 chr10 manual_curation exon 396196 396310 . - . Parent=GSCOCT00024501001 | |
| 31372 chr10 manual_curation exon 396396 396467 . - . Parent=GSCOCT00024501001 | |
| 31373 chr10 manual_curation exon 396871 396969 . - . Parent=GSCOCT00024501001 | |
| 31374 chr10 manual_curation exon 397065 397136 . - . Parent=GSCOCT00024501001 | |
| 31375 chr10 manual_curation exon 397271 397345 . - . Parent=GSCOCT00024501001 | |
| 31376 chr10 manual_curation exon 398093 398316 . - . Parent=GSCOCT00024501001 | |
| 31377 chr10 manual_curation exon 398402 398620 . - . Parent=GSCOCT00024501001 | |
| 31378 chr10 manual_curation exon 398831 399920 . - . Parent=GSCOCT00024501001 | |
| 31379 chr10 manual_curation exon 400765 400911 . - . Parent=GSCOCT00024501001 | |
| 31380 chr10 manual_curation CDS 393688 394119 . - 0 Parent=GSCOCT00024501001 | |
| 31381 chr10 manual_curation CDS 394662 394737 . - 2 Parent=GSCOCT00024501001 | |
| 31382 chr10 manual_curation CDS 394847 395144 . - 1 Parent=GSCOCT00024501001 | |
| 31383 chr10 manual_curation CDS 395246 395314 . - 1 Parent=GSCOCT00024501001 | |
| 31384 chr10 manual_curation CDS 396196 396310 . - 0 Parent=GSCOCT00024501001 | |
| 31385 chr10 manual_curation CDS 396396 396467 . - 0 Parent=GSCOCT00024501001 | |
| 31386 chr10 manual_curation CDS 396871 396969 . - 0 Parent=GSCOCT00024501001 | |
| 31387 chr10 manual_curation CDS 397065 397136 . - 0 Parent=GSCOCT00024501001 | |
| 31388 chr10 manual_curation CDS 397271 397345 . - 0 Parent=GSCOCT00024501001 | |
| 31389 chr10 manual_curation CDS 398093 398316 . - 1 Parent=GSCOCT00024501001 | |
| 31390 chr10 manual_curation CDS 398402 398620 . - 1 Parent=GSCOCT00024501001 | |
| 31391 chr10 manual_curation CDS 398831 399920 . - 0 Parent=GSCOCT00024501001 | |
| 31392 chr10 manual_curation CDS 400765 400911 . - 0 Parent=GSCOCT00024501001 | |
| 31393 chr10 manual_curation gene 404012 406185 . + . ID=GSCOCG00024503001;Name=Cc10_g00510 | |
| 31394 chr10 manual_curation mRNA 404012 406185 . + . ID=GSCOCT00024503001;Parent=GSCOCG00024503001;Name=Cc10_g00510 | |
| 31395 chr10 manual_curation polypeptide 404088 406127 . + . ID=GSCOCP00024503001;Dbxref=InterPro:IPR000399,InterPro:IPR011766,InterPro:IPR012000,InterPro:IPR012001,InterPro:IPR012846,PFAM:PF00205,PFAM:PF02775,PFAM:PF02776,PROSITE:PS00187,SwissProt:P09114,SwissProt:P09342,SwissProt:P27818,TAIR:AT3G48560.1,TAIR:AT5G01330.1,TAIR:AT5G17380.1,TIGRFAMs:TIGR00118,TrEMBL:D3K640,TrEMBL:D7QYK8,TrEMBL:G9F9N4;Derives_from=GSCOCT00024503001;Name=Cc10_g00510;Ontology_term=CC_evidence_code:ISS,GO:0000287,GO:0003824,GO:0003984,GO:0009082,GO:0016740,GO:0030976,GO:0050660,CC_EC_number:2.2.1.6,CC_EC_number:2.2.1.6,PRODUCT:Acetolactate synthase 2%2C chloroplastic,CC_functional_completeness:complete,CC_gene:ALS;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024503001~ Acetolactate synthase 2%2C chloroplastic~ ALS~ complete;original_location=404088..406127;owner=coffea | |
| 31396 chr10 manual_curation exon 404012 406185 . + . Parent=GSCOCT00024503001 | |
| 31397 chr10 manual_curation CDS 404088 406127 . + 0 Parent=GSCOCT00024503001 | |
| 31398 chr10 manual_curation gene 411482 415786 . - . ID=GSCOCG00024506001;Name=Cc10_g00520 | |
| 31399 chr10 manual_curation mRNA 411482 415786 . - . ID=GSCOCT00024506001;Parent=GSCOCG00024506001;Name=Cc10_g00520 | |
| 31400 chr10 manual_curation polypeptide 413052 415786 . - . ID=GSCOCP00024506001;Dbxref=InterPro:IPR005069,PFAM:PF03407,SwissProt:P0C042,SwissProt:Q3E6Y3,TAIR:AT1G14590.1,TAIR:AT2G02061.1,TAIR:AT4G19970.1,TrEMBL:B9HVN9,TrEMBL:B9S7B3,TrEMBL:F6HVU4;Derives_from=GSCOCT00024506001;Name=Cc10_g00520;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Nucleotide-diphospho-sugar transferase family protein,CC_functional_completeness:complete,CC_gene:At4g15970,CC_gene:At1g28695;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024506001~ Nucleotide-diphospho-sugar transferase family protein~ At4g15970~ complete;original_location=complement(join(415754..415786%2C415180..415254%2C414320..414679%2C413052..413675));owner=coffea | |
| 31401 chr10 manual_curation exon 411482 411737 . - . Parent=GSCOCT00024506001 | |
| 31402 chr10 manual_curation exon 413004 413675 . - . Parent=GSCOCT00024506001 | |
| 31403 chr10 manual_curation exon 414320 414679 . - . Parent=GSCOCT00024506001 | |
| 31404 chr10 manual_curation exon 415180 415254 . - . Parent=GSCOCT00024506001 | |
| 31405 chr10 manual_curation exon 415754 415786 . - . Parent=GSCOCT00024506001 | |
| 31406 chr10 manual_curation CDS 413052 413675 . - 0 Parent=GSCOCT00024506001 | |
| 31407 chr10 manual_curation CDS 414320 414679 . - 0 Parent=GSCOCT00024506001 | |
| 31408 chr10 manual_curation CDS 415180 415254 . - 0 Parent=GSCOCT00024506001 | |
| 31409 chr10 manual_curation CDS 415754 415786 . - 0 Parent=GSCOCT00024506001 | |
| 31410 chr10 manual_curation gene 466832 472375 . + . ID=GSCOCG00024507001;Name=Cc10_g00530 | |
| 31411 chr10 manual_curation mRNA 466832 472375 . + . ID=GSCOCT00024507001;Parent=GSCOCG00024507001;Name=Cc10_g00530 | |
| 31412 chr10 manual_curation polypeptide 467789 471845 . + . ID=GSCOCP00024507001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q9FE20,SwissProt:Q9LQQ8,SwissProt:Q9SFT7,TAIR:AT1G20650.1,TAIR:AT5G02800.1,TAIR:AT5G18610.1,TrEMBL:B9R8N9,TrEMBL:E5GBV1,TrEMBL:F6I6T5;Derives_from=GSCOCT00024507001;Name=Cc10_g00530;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Probable serine/threonine-protein kinase RLCKVII,CC_functional_completeness:fragment,CC_gene:PBS1,CC_gene:At1g07870,CC_gene:At3g07070;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024507001~ Probable serine/threonine-protein kinase RLCKVII~ PBS1~ fragment;original_location=join(467789..467873%2C468150..468304%2C468646..468835%2C470692..471083%2C471546..471845);owner=coffea | |
| 31413 chr10 manual_curation exon 466832 467873 . + . Parent=GSCOCT00024507001 | |
| 31414 chr10 manual_curation exon 468150 468304 . + . Parent=GSCOCT00024507001 | |
| 31415 chr10 manual_curation exon 468646 468835 . + . Parent=GSCOCT00024507001 | |
| 31416 chr10 manual_curation exon 470692 471083 . + . Parent=GSCOCT00024507001 | |
| 31417 chr10 manual_curation exon 471546 472375 . + . Parent=GSCOCT00024507001 | |
| 31418 chr10 manual_curation CDS 467789 467873 . + 0 Parent=GSCOCT00024507001 | |
| 31419 chr10 manual_curation CDS 468150 468304 . + 1 Parent=GSCOCT00024507001 | |
| 31420 chr10 manual_curation CDS 468646 468835 . + 0 Parent=GSCOCT00024507001 | |
| 31421 chr10 manual_curation CDS 470692 471083 . + 1 Parent=GSCOCT00024507001 | |
| 31422 chr10 manual_curation CDS 471546 471845 . + 0 Parent=GSCOCT00024507001 | |
| 31423 chr10 manual_curation gene 475242 480631 . + . ID=GSCOCG00024508001;Name=Cc10_g00540 | |
| 31424 chr10 manual_curation mRNA 475242 480631 . + . ID=GSCOCT00024508001;Parent=GSCOCG00024508001;Name=Cc10_g00540 | |
| 31425 chr10 manual_curation polypeptide 475563 480123 . + . ID=GSCOCP00024508001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR020635,PFAM:PF07714,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:P27450,SwissProt:P43293,SwissProt:Q06548,TAIR:AT1G76360.1,TAIR:AT2G17220.1,TAIR:AT4G35600.2,TrEMBL:B9R8N8,TrEMBL:D7UDA4,TrEMBL:F6I6T4;Derives_from=GSCOCT00024508001;Name=Cc10_g00540;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.10.2,PRODUCT:Probable serine/threonine-protein kinase Cx32%2C chloroplastic,CC_functional_completeness:complete,CC_gene:At4g35600,CC_gene:NAK,CC_gene:APK1A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024508001~ Probable serine/threonine-protein kinase Cx32%2C chloroplastic~ At4g35600~ complete;original_location=join(475563..475629%2C475775..476181%2C477985..478120%2C478254..478390%2C478527..478650%2C479648..480123);owner=coffea | |
| 31426 chr10 manual_curation exon 475242 475629 . + . Parent=GSCOCT00024508001 | |
| 31427 chr10 manual_curation exon 475775 476181 . + . Parent=GSCOCT00024508001 | |
| 31428 chr10 manual_curation exon 477985 478120 . + . Parent=GSCOCT00024508001 | |
| 31429 chr10 manual_curation exon 478254 478390 . + . Parent=GSCOCT00024508001 | |
| 31430 chr10 manual_curation exon 478527 478650 . + . Parent=GSCOCT00024508001 | |
| 31431 chr10 manual_curation exon 479648 480631 . + . Parent=GSCOCT00024508001 | |
| 31432 chr10 manual_curation CDS 475563 475629 . + 0 Parent=GSCOCT00024508001 | |
| 31433 chr10 manual_curation CDS 475775 476181 . + 1 Parent=GSCOCT00024508001 | |
| 31434 chr10 manual_curation CDS 477985 478120 . + 0 Parent=GSCOCT00024508001 | |
| 31435 chr10 manual_curation CDS 478254 478390 . + 1 Parent=GSCOCT00024508001 | |
| 31436 chr10 manual_curation CDS 478527 478650 . + 0 Parent=GSCOCT00024508001 | |
| 31437 chr10 manual_curation CDS 479648 480123 . + 1 Parent=GSCOCT00024508001 | |
| 31438 chr10 manual_curation gene 495714 515636 . + . ID=GSCOCG00024510001;Name=Cc10_g00550 | |
| 31439 chr10 manual_curation mRNA 495714 515636 . + . ID=GSCOCT00024510001;Parent=GSCOCG00024510001;Name=Cc10_g00550 | |
| 31440 chr10 manual_curation polypeptide 496036 514733 . + . ID=GSCOCP00024510001;Dbxref=InterPro:IPR000731,InterPro:IPR003392,InterPro:IPR004765,PFAM:PF02460,PROFILE:PS50156,SwissProt:O15118,SwissProt:O35604,SwissProt:P56941,TAIR:AT1G42470.1,TAIR:AT4G38350.2,TIGRFAMs:TIGR00917,TrEMBL:B9H5I2,TrEMBL:B9R8N7,TrEMBL:D7UDA3;Derives_from=GSCOCT00024510001;Name=Cc10_g00550;Ontology_term=CC_evidence_code:ISS,GO:0008158,GO:0016020,GO:0016021,GO:0030301,CC_EC_number:missing_EC_number,PRODUCT:Putative Niemann-Pick C1 protein,CC_functional_completeness:complete,CC_gene:NPC1,CC_gene:Npc1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024510001~ Putative Niemann-Pick C1 protein~ NPC1~ complete;original_location=join(496036..496098%2C496665..496753%2C497186..497285%2C497572..497679%2C498634..498754%2C499175..499321%2C499567..499814%2C499925..500113%2C500631..500707%2C500808..500925%2C501408..501491%2C501686..501781%2C501943..502044%2C502969..503037%2C503519..503614%2C503690..503797%2C504510..504623%2C504778..504861%2C505517..505645%2C506065..506263%2C506410..506553%2C506661..506704%2C506992..507075%2C507190..507258%2C507331..507407%2C507926..507995%2C508737..508886%2C509957..509998%2C510202..510346%2C510499..510563%2C510649..510714%2C511335..511428%2C511986..512022%2C512136..512193%2C512279..512389%2C513134..513201%2C514138..514204%2C514288..514356%2C514647..514733);owner=coffea | |
| 31441 chr10 manual_curation exon 495714 496098 . + . Parent=GSCOCT00024510001 | |
| 31442 chr10 manual_curation exon 496665 496753 . + . Parent=GSCOCT00024510001 | |
| 31443 chr10 manual_curation exon 497186 497285 . + . Parent=GSCOCT00024510001 | |
| 31444 chr10 manual_curation exon 497572 497679 . + . Parent=GSCOCT00024510001 | |
| 31445 chr10 manual_curation exon 498634 498754 . + . Parent=GSCOCT00024510001 | |
| 31446 chr10 manual_curation exon 499175 499321 . + . Parent=GSCOCT00024510001 | |
| 31447 chr10 manual_curation exon 499567 499814 . + . Parent=GSCOCT00024510001 | |
| 31448 chr10 manual_curation exon 499925 500113 . + . Parent=GSCOCT00024510001 | |
| 31449 chr10 manual_curation exon 500631 500707 . + . Parent=GSCOCT00024510001 | |
| 31450 chr10 manual_curation exon 500808 500925 . + . Parent=GSCOCT00024510001 | |
| 31451 chr10 manual_curation exon 501408 501491 . + . Parent=GSCOCT00024510001 | |
| 31452 chr10 manual_curation exon 501686 501781 . + . Parent=GSCOCT00024510001 | |
| 31453 chr10 manual_curation exon 501943 502044 . + . Parent=GSCOCT00024510001 | |
| 31454 chr10 manual_curation exon 502969 503037 . + . Parent=GSCOCT00024510001 | |
| 31455 chr10 manual_curation exon 503519 503614 . + . Parent=GSCOCT00024510001 | |
| 31456 chr10 manual_curation exon 503690 503797 . + . Parent=GSCOCT00024510001 | |
| 31457 chr10 manual_curation exon 504510 504623 . + . Parent=GSCOCT00024510001 | |
| 31458 chr10 manual_curation exon 504778 504861 . + . Parent=GSCOCT00024510001 | |
| 31459 chr10 manual_curation exon 505517 505645 . + . Parent=GSCOCT00024510001 | |
| 31460 chr10 manual_curation exon 506065 506263 . + . Parent=GSCOCT00024510001 | |
| 31461 chr10 manual_curation exon 506410 506553 . + . Parent=GSCOCT00024510001 | |
| 31462 chr10 manual_curation exon 506661 506704 . + . Parent=GSCOCT00024510001 | |
| 31463 chr10 manual_curation exon 506992 507075 . + . Parent=GSCOCT00024510001 | |
| 31464 chr10 manual_curation exon 507190 507258 . + . Parent=GSCOCT00024510001 | |
| 31465 chr10 manual_curation exon 507331 507407 . + . Parent=GSCOCT00024510001 | |
| 31466 chr10 manual_curation exon 507926 507995 . + . Parent=GSCOCT00024510001 | |
| 31467 chr10 manual_curation exon 508737 508886 . + . Parent=GSCOCT00024510001 | |
| 31468 chr10 manual_curation exon 509957 509998 . + . Parent=GSCOCT00024510001 | |
| 31469 chr10 manual_curation exon 510202 510346 . + . Parent=GSCOCT00024510001 | |
| 31470 chr10 manual_curation exon 510499 510563 . + . Parent=GSCOCT00024510001 | |
| 31471 chr10 manual_curation exon 510649 510714 . + . Parent=GSCOCT00024510001 | |
| 31472 chr10 manual_curation exon 511335 511428 . + . Parent=GSCOCT00024510001 | |
| 31473 chr10 manual_curation exon 511986 512022 . + . Parent=GSCOCT00024510001 | |
| 31474 chr10 manual_curation exon 512136 512193 . + . Parent=GSCOCT00024510001 | |
| 31475 chr10 manual_curation exon 512279 512389 . + . Parent=GSCOCT00024510001 | |
| 31476 chr10 manual_curation exon 513134 513201 . + . Parent=GSCOCT00024510001 | |
| 31477 chr10 manual_curation exon 514138 514204 . + . Parent=GSCOCT00024510001 | |
| 31478 chr10 manual_curation exon 514288 514356 . + . Parent=GSCOCT00024510001 | |
| 31479 chr10 manual_curation exon 514647 515636 . + . Parent=GSCOCT00024510001 | |
| 31480 chr10 manual_curation CDS 496036 496098 . + 0 Parent=GSCOCT00024510001 | |
| 31481 chr10 manual_curation CDS 496665 496753 . + 0 Parent=GSCOCT00024510001 | |
| 31482 chr10 manual_curation CDS 497186 497285 . + 2 Parent=GSCOCT00024510001 | |
| 31483 chr10 manual_curation CDS 497572 497679 . + 0 Parent=GSCOCT00024510001 | |
| 31484 chr10 manual_curation CDS 498634 498754 . + 0 Parent=GSCOCT00024510001 | |
| 31485 chr10 manual_curation CDS 499175 499321 . + 1 Parent=GSCOCT00024510001 | |
| 31486 chr10 manual_curation CDS 499567 499814 . + 1 Parent=GSCOCT00024510001 | |
| 31487 chr10 manual_curation CDS 499925 500113 . + 0 Parent=GSCOCT00024510001 | |
| 31488 chr10 manual_curation CDS 500631 500707 . + 0 Parent=GSCOCT00024510001 | |
| 31489 chr10 manual_curation CDS 500808 500925 . + 2 Parent=GSCOCT00024510001 | |
| 31490 chr10 manual_curation CDS 501408 501491 . + 0 Parent=GSCOCT00024510001 | |
| 31491 chr10 manual_curation CDS 501686 501781 . + 0 Parent=GSCOCT00024510001 | |
| 31492 chr10 manual_curation CDS 501943 502044 . + 0 Parent=GSCOCT00024510001 | |
| 31493 chr10 manual_curation CDS 502969 503037 . + 0 Parent=GSCOCT00024510001 | |
| 31494 chr10 manual_curation CDS 503519 503614 . + 0 Parent=GSCOCT00024510001 | |
| 31495 chr10 manual_curation CDS 503690 503797 . + 0 Parent=GSCOCT00024510001 | |
| 31496 chr10 manual_curation CDS 504510 504623 . + 0 Parent=GSCOCT00024510001 | |
| 31497 chr10 manual_curation CDS 504778 504861 . + 0 Parent=GSCOCT00024510001 | |
| 31498 chr10 manual_curation CDS 505517 505645 . + 0 Parent=GSCOCT00024510001 | |
| 31499 chr10 manual_curation CDS 506065 506263 . + 0 Parent=GSCOCT00024510001 | |
| 31500 chr10 manual_curation CDS 506410 506553 . + 1 Parent=GSCOCT00024510001 | |
| 31501 chr10 manual_curation CDS 506661 506704 . + 1 Parent=GSCOCT00024510001 | |
| 31502 chr10 manual_curation CDS 506992 507075 . + 0 Parent=GSCOCT00024510001 | |
| 31503 chr10 manual_curation CDS 507190 507258 . + 0 Parent=GSCOCT00024510001 | |
| 31504 chr10 manual_curation CDS 507331 507407 . + 0 Parent=GSCOCT00024510001 | |
| 31505 chr10 manual_curation CDS 507926 507995 . + 2 Parent=GSCOCT00024510001 | |
| 31506 chr10 manual_curation CDS 508737 508886 . + 0 Parent=GSCOCT00024510001 | |
| 31507 chr10 manual_curation CDS 509957 509998 . + 0 Parent=GSCOCT00024510001 | |
| 31508 chr10 manual_curation CDS 510202 510346 . + 0 Parent=GSCOCT00024510001 | |
| 31509 chr10 manual_curation CDS 510499 510563 . + 1 Parent=GSCOCT00024510001 | |
| 31510 chr10 manual_curation CDS 510649 510714 . + 0 Parent=GSCOCT00024510001 | |
| 31511 chr10 manual_curation CDS 511335 511428 . + 0 Parent=GSCOCT00024510001 | |
| 31512 chr10 manual_curation CDS 511986 512022 . + 1 Parent=GSCOCT00024510001 | |
| 31513 chr10 manual_curation CDS 512136 512193 . + 2 Parent=GSCOCT00024510001 | |
| 31514 chr10 manual_curation CDS 512279 512389 . + 0 Parent=GSCOCT00024510001 | |
| 31515 chr10 manual_curation CDS 513134 513201 . + 0 Parent=GSCOCT00024510001 | |
| 31516 chr10 manual_curation CDS 514138 514204 . + 2 Parent=GSCOCT00024510001 | |
| 31517 chr10 manual_curation CDS 514288 514356 . + 0 Parent=GSCOCT00024510001 | |
| 31518 chr10 manual_curation CDS 514647 514733 . + 0 Parent=GSCOCT00024510001 | |
| 31519 chr10 manual_curation gene 515929 521573 . - . ID=GSCOCG00024511001;Name=Cc10_g00560 | |
| 31520 chr10 manual_curation mRNA 515929 521573 . - . ID=GSCOCT00024511001;Parent=GSCOCG00024511001;Name=Cc10_g00560 | |
| 31521 chr10 manual_curation polypeptide 516261 520385 . - . ID=GSCOCP00024511001;Dbxref=InterPro:IPR000270,InterPro:IPR003035,PFAM:PF00564,PFAM:PF02042,SMART:SM00666,SwissProt:Q7X9B9,SwissProt:Q8H111,SwissProt:Q9SFW8,TAIR:AT1G76350.1,TAIR:AT2G17150.1,TAIR:AT4G35270.1,TrEMBL:A5APM7,TrEMBL:B9GQ07,TrEMBL:B9R8N5;Derives_from=GSCOCT00024511001;Name=Cc10_g00560;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein NLP5,CC_functional_completeness:complete,CC_gene:NLP5,CC_gene:NLP2,CC_gene:NLP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024511001~ Putative Protein NLP5~ NLP5~ complete;original_location=complement(join(520129..520385%2C519492..520032%2C518720..518767%2C517668..518625%2C516261..517153));owner=coffea | |
| 31522 chr10 manual_curation exon 521218 521573 . - . Parent=GSCOCT00024511001 | |
| 31523 chr10 manual_curation exon 515929 517153 . - . Parent=GSCOCT00024511001 | |
| 31524 chr10 manual_curation exon 517668 518625 . - . Parent=GSCOCT00024511001 | |
| 31525 chr10 manual_curation exon 518720 518767 . - . Parent=GSCOCT00024511001 | |
| 31526 chr10 manual_curation exon 519492 520032 . - . Parent=GSCOCT00024511001 | |
| 31527 chr10 manual_curation exon 520129 520678 . - . Parent=GSCOCT00024511001 | |
| 31528 chr10 manual_curation CDS 516261 517153 . - 1 Parent=GSCOCT00024511001 | |
| 31529 chr10 manual_curation CDS 517668 518625 . - 0 Parent=GSCOCT00024511001 | |
| 31530 chr10 manual_curation CDS 518720 518767 . - 0 Parent=GSCOCT00024511001 | |
| 31531 chr10 manual_curation CDS 519492 520032 . - 2 Parent=GSCOCT00024511001 | |
| 31532 chr10 manual_curation CDS 520129 520385 . - 0 Parent=GSCOCT00024511001 | |
| 31533 chr10 manual_curation gene 525068 530553 . - . ID=GSCOCG00024513001;Name=Cc10_g00570 | |
| 31534 chr10 manual_curation mRNA 525068 530553 . - . ID=GSCOCT00024513001;Parent=GSCOCG00024513001;Name=Cc10_g00570 | |
| 31535 chr10 manual_curation polypeptide 525068 530469 . - . ID=GSCOCP00024513001;Dbxref=GENE3D:G3DSA:2.40.180.10,InterPro:IPR002226,InterPro:IPR010582,InterPro:IPR011614,InterPro:IPR018028,InterPro:IPR020835,PANTHER:PTHR11465,PFAM:PF00199,PFAM:PF06628,PRINTS:PR00067,PROFILE:PS51402,PROSITE:PS00437,PROSITE:PS00438,SUPERFAMILY:SSF56634,SwissProt:O24339,SwissProt:P17598,SwissProt:P49317,TAIR:AT1G20620.1,TAIR:AT1G20630.1,TAIR:AT4G35090.1,TrEMBL:A9PIW4,TrEMBL:Q1XFN0,TrEMBL:Q7XTK9;Derives_from=GSCOCT00024513001;Name=Cc10_g00570;Ontology_term=CC_evidence_code:ISS,GO:0004096,GO:0005506,GO:0006979,GO:0020037,GO:0055114,CC_EC_number:1.11.1.6,PRODUCT:Catalase,CC_functional_completeness:complete,CC_gene:CAT3,CC_gene:CAT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024513001~ Catalase~ CAT3~ complete;original_location=complement(join(530455..530469%2C529997..530093%2C528460..528737%2C527033..527809%2C526307..526396%2C525425..525492%2C525242..525335%2C525068..525127));owner=coffea | |
| 31536 chr10 manual_curation exon 525068 525127 . - . Parent=GSCOCT00024513001 | |
| 31537 chr10 manual_curation exon 525242 525335 . - . Parent=GSCOCT00024513001 | |
| 31538 chr10 manual_curation exon 525425 525492 . - . Parent=GSCOCT00024513001 | |
| 31539 chr10 manual_curation exon 526307 526396 . - . Parent=GSCOCT00024513001 | |
| 31540 chr10 manual_curation exon 527033 527809 . - . Parent=GSCOCT00024513001 | |
| 31541 chr10 manual_curation exon 528460 528737 . - . Parent=GSCOCT00024513001 | |
| 31542 chr10 manual_curation exon 529997 530093 . - . Parent=GSCOCT00024513001 | |
| 31543 chr10 manual_curation exon 530455 530553 . - . Parent=GSCOCT00024513001 | |
| 31544 chr10 manual_curation CDS 525068 525127 . - 0 Parent=GSCOCT00024513001 | |
| 31545 chr10 manual_curation CDS 525242 525335 . - 2 Parent=GSCOCT00024513001 | |
| 31546 chr10 manual_curation CDS 525425 525492 . - 0 Parent=GSCOCT00024513001 | |
| 31547 chr10 manual_curation CDS 526307 526396 . - 0 Parent=GSCOCT00024513001 | |
| 31548 chr10 manual_curation CDS 527033 527809 . - 0 Parent=GSCOCT00024513001 | |
| 31549 chr10 manual_curation CDS 528460 528737 . - 1 Parent=GSCOCT00024513001 | |
| 31550 chr10 manual_curation CDS 529997 530093 . - 0 Parent=GSCOCT00024513001 | |
| 31551 chr10 manual_curation CDS 530455 530469 . - 0 Parent=GSCOCT00024513001 | |
| 31552 chr10 manual_curation gene 531603 536590 . - . ID=GSCOCG00024515001;Name=Cc10_g00580 | |
| 31553 chr10 manual_curation mRNA 531603 536590 . - . ID=GSCOCT00024515001;Parent=GSCOCG00024515001;Name=Cc10_g00580 | |
| 31554 chr10 manual_curation polypeptide 531805 536350 . - . ID=GSCOCP00024515001;Dbxref=GENE3D:G3DSA:2.40.180.10,InterPro:IPR002226,InterPro:IPR010582,InterPro:IPR011614,InterPro:IPR018028,InterPro:IPR020835,PANTHER:PTHR11465,PFAM:PF00199,PFAM:PF06628,PRINTS:PR00067,PROFILE:PS51402,PROSITE:PS00437,PROSITE:PS00438,SUPERFAMILY:SSF56634,SwissProt:O24339,SwissProt:P30567,SwissProt:P49317,TAIR:AT1G20620.1,TAIR:AT1G20630.1,TAIR:AT4G35090.1,TrEMBL:A1Z1Z6,TrEMBL:D7UD99,TrEMBL:G9JJS6;Derives_from=GSCOCT00024515001;Name=Cc10_g00580;Ontology_term=CC_evidence_code:ISS,GO:0004096,GO:0005506,GO:0006979,GO:0020037,GO:0055114,CC_EC_number:1.11.1.6,PRODUCT:Catalase isozyme 3,CC_functional_completeness:complete,CC_gene:CAT3,CC_gene:CAT2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024515001~ Catalase isozyme 3~ CAT3~ complete;original_location=complement(join(536336..536350%2C535898..535994%2C535190..535467%2C533762..534538%2C533046..533135%2C532161..532228%2C531978..532071%2C531805..531864));owner=coffea | |
| 31555 chr10 manual_curation exon 531603 531864 . - . Parent=GSCOCT00024515001 | |
| 31556 chr10 manual_curation exon 531978 532071 . - . Parent=GSCOCT00024515001 | |
| 31557 chr10 manual_curation exon 532161 532228 . - . Parent=GSCOCT00024515001 | |
| 31558 chr10 manual_curation exon 533046 533135 . - . Parent=GSCOCT00024515001 | |
| 31559 chr10 manual_curation exon 533762 534538 . - . Parent=GSCOCT00024515001 | |
| 31560 chr10 manual_curation exon 535190 535467 . - . Parent=GSCOCT00024515001 | |
| 31561 chr10 manual_curation exon 535898 535994 . - . Parent=GSCOCT00024515001 | |
| 31562 chr10 manual_curation exon 536336 536590 . - . Parent=GSCOCT00024515001 | |
| 31563 chr10 manual_curation CDS 531805 531864 . - 0 Parent=GSCOCT00024515001 | |
| 31564 chr10 manual_curation CDS 531978 532071 . - 2 Parent=GSCOCT00024515001 | |
| 31565 chr10 manual_curation CDS 532161 532228 . - 0 Parent=GSCOCT00024515001 | |
| 31566 chr10 manual_curation CDS 533046 533135 . - 0 Parent=GSCOCT00024515001 | |
| 31567 chr10 manual_curation CDS 533762 534538 . - 0 Parent=GSCOCT00024515001 | |
| 31568 chr10 manual_curation CDS 535190 535467 . - 1 Parent=GSCOCT00024515001 | |
| 31569 chr10 manual_curation CDS 535898 535994 . - 0 Parent=GSCOCT00024515001 | |
| 31570 chr10 manual_curation CDS 536336 536350 . - 0 Parent=GSCOCT00024515001 | |
| 31571 chr10 manual_curation gene 539961 543875 . - . ID=GSCOCG00024516001;Name=Cc10_g00590 | |
| 31572 chr10 manual_curation mRNA 539961 543875 . - . ID=GSCOCT00024516001;Parent=GSCOCG00024516001;Name=Cc10_g00590 | |
| 31573 chr10 manual_curation polypeptide 540408 543875 . - . ID=GSCOCP00024516001;Dbxref=TAIR:AT4G38280.1,TrEMBL:A5C7C8,TrEMBL:F6H085,TrEMBL:I1K6V1;Derives_from=GSCOCT00024516001;Name=Cc10_g00590;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024516001~ Putative uncharacterized protein~ unknown_gene~ modules;original_location=complement(join(543678..543875%2C543599..543621%2C542004..542779%2C541823..541906%2C540408..540538));owner=coffea | |
| 31574 chr10 manual_curation exon 539961 540538 . - . Parent=GSCOCT00024516001 | |
| 31575 chr10 manual_curation exon 541823 541906 . - . Parent=GSCOCT00024516001 | |
| 31576 chr10 manual_curation exon 542004 542779 . - . Parent=GSCOCT00024516001 | |
| 31577 chr10 manual_curation exon 543599 543621 . - . Parent=GSCOCT00024516001 | |
| 31578 chr10 manual_curation exon 543678 543875 . - . Parent=GSCOCT00024516001 | |
| 31579 chr10 manual_curation CDS 540408 540538 . - 1 Parent=GSCOCT00024516001 | |
| 31580 chr10 manual_curation CDS 541823 541906 . - 1 Parent=GSCOCT00024516001 | |
| 31581 chr10 manual_curation CDS 542004 542779 . - 2 Parent=GSCOCT00024516001 | |
| 31582 chr10 manual_curation CDS 543599 543621 . - 0 Parent=GSCOCT00024516001 | |
| 31583 chr10 manual_curation CDS 543678 543875 . - 0 Parent=GSCOCT00024516001 | |
| 31584 chr10 manual_curation gene 547909 548720 . + . ID=GSCOCG00024517001;Name=Cc10_g00600 | |
| 31585 chr10 manual_curation mRNA 547909 548720 . + . ID=GSCOCT00024517001;Parent=GSCOCG00024517001;Name=Cc10_g00600 | |
| 31586 chr10 manual_curation polypeptide 548499 548720 . + . ID=GSCOCP00024517001;Derives_from=GSCOCT00024517001;Name=Cc10_g00600;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024517001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=548499..548720;owner=coffea | |
| 31587 chr10 manual_curation exon 547909 548720 . + . Parent=GSCOCT00024517001 | |
| 31588 chr10 manual_curation CDS 548499 548720 . + 0 Parent=GSCOCT00024517001 | |
| 31589 chr10 manual_curation gene 549140 550572 . - . ID=GSCOCG00024518001;Name=Cc10_g00610 | |
| 31590 chr10 manual_curation mRNA 549140 550572 . - . ID=GSCOCT00024518001;Parent=GSCOCG00024518001;Name=Cc10_g00610 | |
| 31591 chr10 manual_curation polypeptide 549140 550572 . - . ID=GSCOCP00024518001;Dbxref=InterPro:IPR003613,PFAM:PF04564,SwissProt:Q681N2,SwissProt:Q9SNC6,SwissProt:Q9ZV31,TAIR:AT2G28830.1,TAIR:AT3G46510.1,TAIR:AT5G42340.1,TrEMBL:B9GQ09,TrEMBL:B9R8N3,TrEMBL:F6I0T1;Derives_from=GSCOCT00024518001;Name=Cc10_g00610;Ontology_term=CC_evidence_code:ISS,GO:0000151,GO:0004842,GO:0016567,CC_EC_number:missing_EC_number,PRODUCT:Putative U-box domain-containing protein 13,CC_functional_completeness:fragment,CC_gene:PUB15,CC_gene:PUB13,CC_gene:PUB12;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024518001~ Putative U-box domain-containing protein 13~ PUB15~ fragment;original_location=complement(join(550222..550572%2C549995..550111%2C549140..549703));owner=coffea | |
| 31592 chr10 manual_curation exon 549140 549703 . - . Parent=GSCOCT00024518001 | |
| 31593 chr10 manual_curation exon 549995 550111 . - . Parent=GSCOCT00024518001 | |
| 31594 chr10 manual_curation exon 550222 550572 . - . Parent=GSCOCT00024518001 | |
| 31595 chr10 manual_curation CDS 549140 549703 . - 0 Parent=GSCOCT00024518001 | |
| 31596 chr10 manual_curation CDS 549995 550111 . - 0 Parent=GSCOCT00024518001 | |
| 31597 chr10 manual_curation CDS 550222 550572 . - 0 Parent=GSCOCT00024518001 | |
| 31598 chr10 manual_curation gene 553238 557120 . + . ID=GSCOCG00024519001;Name=Cc10_g00620 | |
| 31599 chr10 manual_curation mRNA 553238 557120 . + . ID=GSCOCT00024519001;Parent=GSCOCG00024519001;Name=Cc10_g00620 | |
| 31600 chr10 manual_curation polypeptide 553635 556753 . + . ID=GSCOCP00024519001;Dbxref=GENE3D:G3DSA:1.10.472.10,InterPro:IPR004367,InterPro:IPR006670,InterPro:IPR006671,InterPro:IPR011028,InterPro:IPR013763,InterPro:IPR014400,PFAM:PF00134,PFAM:PF02984,PIR:PIRSF001771,PROSITE:PS00292,SMART:SM00385,SUPERFAMILY:SSF47954,SwissProt:P46277,SwissProt:Q9LDM4,SwissProt:Q9SFW6,TAIR:AT1G20610.1,TAIR:AT1G76310.1,TAIR:AT2G17620.1,TrEMBL:B9R8N2,TrEMBL:E0CQ49,TrEMBL:G3G857;Derives_from=GSCOCT00024519001;Name=Cc10_g00620;Ontology_term=CC_evidence_code:ISS,GO:0005634,CC_EC_number:missing_EC_number,PRODUCT:Cyclin-B2-4,CC_functional_completeness:complete,CC_gene:CYCB2-4,CC_gene:CYCB2-3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024519001~ Cyclin-B2-4~ CYCB2-4~ complete;original_location=join(553635..553698%2C553855..553990%2C554110..554166%2C554340..554388%2C554508..554660%2C554733..554861%2C555633..555722%2C555826..556047%2C556145..556243%2C556327..556505%2C556600..556753);owner=coffea | |
| 31601 chr10 manual_curation exon 553238 553388 . + . Parent=GSCOCT00024519001 | |
| 31602 chr10 manual_curation exon 553617 553698 . + . Parent=GSCOCT00024519001 | |
| 31603 chr10 manual_curation exon 553855 553990 . + . Parent=GSCOCT00024519001 | |
| 31604 chr10 manual_curation exon 554110 554166 . + . Parent=GSCOCT00024519001 | |
| 31605 chr10 manual_curation exon 554340 554388 . + . Parent=GSCOCT00024519001 | |
| 31606 chr10 manual_curation exon 554508 554660 . + . Parent=GSCOCT00024519001 | |
| 31607 chr10 manual_curation exon 554733 554861 . + . Parent=GSCOCT00024519001 | |
| 31608 chr10 manual_curation exon 555633 555722 . + . Parent=GSCOCT00024519001 | |
| 31609 chr10 manual_curation exon 555826 556047 . + . Parent=GSCOCT00024519001 | |
| 31610 chr10 manual_curation exon 556145 556243 . + . Parent=GSCOCT00024519001 | |
| 31611 chr10 manual_curation exon 556327 556505 . + . Parent=GSCOCT00024519001 | |
| 31612 chr10 manual_curation exon 556600 557120 . + . Parent=GSCOCT00024519001 | |
| 31613 chr10 manual_curation CDS 553635 553698 . + 0 Parent=GSCOCT00024519001 | |
| 31614 chr10 manual_curation CDS 553855 553990 . + 1 Parent=GSCOCT00024519001 | |
| 31615 chr10 manual_curation CDS 554110 554166 . + 2 Parent=GSCOCT00024519001 | |
| 31616 chr10 manual_curation CDS 554340 554388 . + 2 Parent=GSCOCT00024519001 | |
| 31617 chr10 manual_curation CDS 554508 554660 . + 0 Parent=GSCOCT00024519001 | |
| 31618 chr10 manual_curation CDS 554733 554861 . + 0 Parent=GSCOCT00024519001 | |
| 31619 chr10 manual_curation CDS 555633 555722 . + 0 Parent=GSCOCT00024519001 | |
| 31620 chr10 manual_curation CDS 555826 556047 . + 0 Parent=GSCOCT00024519001 | |
| 31621 chr10 manual_curation CDS 556145 556243 . + 0 Parent=GSCOCT00024519001 | |
| 31622 chr10 manual_curation CDS 556327 556505 . + 0 Parent=GSCOCT00024519001 | |
| 31623 chr10 manual_curation CDS 556600 556753 . + 2 Parent=GSCOCT00024519001 | |
| 31624 chr10 manual_curation gene 558195 565139 . + . ID=GSCOCG00024520001;Name=Cc10_g00630 | |
| 31625 chr10 manual_curation mRNA 558195 565139 . + . ID=GSCOCT00024520001;Parent=GSCOCG00024520001;Name=Cc10_g00630 | |
| 31626 chr10 manual_curation polypeptide 559147 564892 . + . ID=GSCOCP00024520001;Dbxref=GENE3D:G3DSA:3.30.710.10,InterPro:IPR000210,InterPro:IPR000421,InterPro:IPR008979,InterPro:IPR011333,InterPro:IPR011705,InterPro:IPR013069,InterPro:IPR013089,InterPro:IPR022041,PANTHER:PTHR23230,PFAM:PF00651,PFAM:PF00754,PFAM:PF07707,PFAM:PF12248,PROFILE:PS50097,SMART:SM00225,SMART:SM00875,SUPERFAMILY:SSF49785,SUPERFAMILY:SSF54695,SwissProt:Q56A24,SwissProt:Q6TFL4,SwissProt:Q8LEV3,TAIR:AT2G30600.5,TrEMBL:B9H5H7,TrEMBL:B9R8N1,TrEMBL:F6I6T0;Derives_from=GSCOCT00024520001;Name=Cc10_g00630;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0007155,CC_EC_number:missing_EC_number,PRODUCT:BTB/POZ domain-containing protein At2g30600,CC_functional_completeness:complete,CC_gene:At2g30600/At2g30610,CC_gene:KLHL24,CC_gene:Klhl24;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024520001~ BTB/POZ domain-containing protein At2g30600~ At2g30600/At2g30610~ complete;original_location=join(559147..559947%2C560414..560740%2C561172..561402%2C561734..561895%2C562639..562851%2C562938..562985%2C563076..563125%2C563609..563741%2C563829..563903%2C563996..564076%2C564433..564501%2C564674..564892);owner=coffea | |
| 31627 chr10 manual_curation exon 558195 558520 . + . Parent=GSCOCT00024520001 | |
| 31628 chr10 manual_curation exon 559083 559947 . + . Parent=GSCOCT00024520001 | |
| 31629 chr10 manual_curation exon 560414 560740 . + . Parent=GSCOCT00024520001 | |
| 31630 chr10 manual_curation exon 561172 561402 . + . Parent=GSCOCT00024520001 | |
| 31631 chr10 manual_curation exon 561734 561895 . + . Parent=GSCOCT00024520001 | |
| 31632 chr10 manual_curation exon 562639 562851 . + . Parent=GSCOCT00024520001 | |
| 31633 chr10 manual_curation exon 562938 562985 . + . Parent=GSCOCT00024520001 | |
| 31634 chr10 manual_curation exon 563076 563125 . + . Parent=GSCOCT00024520001 | |
| 31635 chr10 manual_curation exon 563609 563741 . + . Parent=GSCOCT00024520001 | |
| 31636 chr10 manual_curation exon 563829 563903 . + . Parent=GSCOCT00024520001 | |
| 31637 chr10 manual_curation exon 563996 564076 . + . Parent=GSCOCT00024520001 | |
| 31638 chr10 manual_curation exon 564433 564501 . + . Parent=GSCOCT00024520001 | |
| 31639 chr10 manual_curation exon 564674 565139 . + . Parent=GSCOCT00024520001 | |
| 31640 chr10 manual_curation CDS 559147 559947 . + 0 Parent=GSCOCT00024520001 | |
| 31641 chr10 manual_curation CDS 560414 560740 . + 0 Parent=GSCOCT00024520001 | |
| 31642 chr10 manual_curation CDS 561172 561402 . + 0 Parent=GSCOCT00024520001 | |
| 31643 chr10 manual_curation CDS 561734 561895 . + 0 Parent=GSCOCT00024520001 | |
| 31644 chr10 manual_curation CDS 562639 562851 . + 0 Parent=GSCOCT00024520001 | |
| 31645 chr10 manual_curation CDS 562938 562985 . + 0 Parent=GSCOCT00024520001 | |
| 31646 chr10 manual_curation CDS 563076 563125 . + 0 Parent=GSCOCT00024520001 | |
| 31647 chr10 manual_curation CDS 563609 563741 . + 2 Parent=GSCOCT00024520001 | |
| 31648 chr10 manual_curation CDS 563829 563903 . + 0 Parent=GSCOCT00024520001 | |
| 31649 chr10 manual_curation CDS 563996 564076 . + 0 Parent=GSCOCT00024520001 | |
| 31650 chr10 manual_curation CDS 564433 564501 . + 0 Parent=GSCOCT00024520001 | |
| 31651 chr10 manual_curation CDS 564674 564892 . + 0 Parent=GSCOCT00024520001 | |
| 31652 chr10 manual_curation gene 565728 573196 . + . ID=GSCOCG00024521001;Name=Cc10_g00640 | |
| 31653 chr10 manual_curation mRNA 565728 573196 . + . ID=GSCOCT00024521001;Parent=GSCOCG00024521001;Name=Cc10_g00640 | |
| 31654 chr10 manual_curation polypeptide 565858 572770 . + . ID=GSCOCP00024521001;Dbxref=GENE3D:G3DSA:2.60.40.10,GENE3D:G3DSA:2.60.40.1180,GENE3D:G3DSA:3.20.20.80,InterPro:IPR004193,InterPro:IPR006047,InterPro:IPR006048,InterPro:IPR006589,InterPro:IPR013780,InterPro:IPR013781,InterPro:IPR013783,InterPro:IPR014756,InterPro:IPR017853,PFAM:PF00128,PFAM:PF02806,PFAM:PF02922,SMART:SM00642,SUPERFAMILY:SSF51445,SUPERFAMILY:SSF81296,SwissProt:O23647,SwissProt:P30924,SwissProt:Q01401,TAIR:AT2G36390.1,TAIR:AT3G20440.2,TAIR:AT5G03650.1,TrEMBL:E0CQR2,TrEMBL:Q18PQ3,TrEMBL:Q18PQ4;Derives_from=GSCOCT00024521001;Name=Cc10_g00640;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0043169,CC_EC_number:2.4.1.18,PRODUCT:1%2C4-alpha-glucan-branching enzyme,CC_functional_completeness:complete,CC_gene:SBE1,CC_gene:SBE2.1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024521001~ 1%2C4-alpha-glucan-branching enzyme~ SBE1~ complete;original_location=join(565858..565941%2C566439..566549%2C567048..567258%2C567531..567600%2C567742..568011%2C568349..569255%2C569425..569541%2C569904..569966%2C570386..570493%2C570852..570953%2C571425..571492%2C571632..571713%2C571913..572029%2C572528..572770);owner=coffea | |
| 31655 chr10 manual_curation exon 565728 565941 . + . Parent=GSCOCT00024521001 | |
| 31656 chr10 manual_curation exon 566439 566549 . + . Parent=GSCOCT00024521001 | |
| 31657 chr10 manual_curation exon 567048 567258 . + . Parent=GSCOCT00024521001 | |
| 31658 chr10 manual_curation exon 567531 567600 . + . Parent=GSCOCT00024521001 | |
| 31659 chr10 manual_curation exon 567742 568011 . + . Parent=GSCOCT00024521001 | |
| 31660 chr10 manual_curation exon 568349 569255 . + . Parent=GSCOCT00024521001 | |
| 31661 chr10 manual_curation exon 569425 569541 . + . Parent=GSCOCT00024521001 | |
| 31662 chr10 manual_curation exon 569904 569966 . + . Parent=GSCOCT00024521001 | |
| 31663 chr10 manual_curation exon 570386 570493 . + . Parent=GSCOCT00024521001 | |
| 31664 chr10 manual_curation exon 570852 570953 . + . Parent=GSCOCT00024521001 | |
| 31665 chr10 manual_curation exon 571425 571492 . + . Parent=GSCOCT00024521001 | |
| 31666 chr10 manual_curation exon 571632 571713 . + . Parent=GSCOCT00024521001 | |
| 31667 chr10 manual_curation exon 571913 572029 . + . Parent=GSCOCT00024521001 | |
| 31668 chr10 manual_curation exon 572528 573196 . + . Parent=GSCOCT00024521001 | |
| 31669 chr10 manual_curation CDS 565858 565941 . + 0 Parent=GSCOCT00024521001 | |
| 31670 chr10 manual_curation CDS 566439 566549 . + 0 Parent=GSCOCT00024521001 | |
| 31671 chr10 manual_curation CDS 567048 567258 . + 0 Parent=GSCOCT00024521001 | |
| 31672 chr10 manual_curation CDS 567531 567600 . + 1 Parent=GSCOCT00024521001 | |
| 31673 chr10 manual_curation CDS 567742 568011 . + 2 Parent=GSCOCT00024521001 | |
| 31674 chr10 manual_curation CDS 568349 569255 . + 2 Parent=GSCOCT00024521001 | |
| 31675 chr10 manual_curation CDS 569425 569541 . + 0 Parent=GSCOCT00024521001 | |
| 31676 chr10 manual_curation CDS 569904 569966 . + 0 Parent=GSCOCT00024521001 | |
| 31677 chr10 manual_curation CDS 570386 570493 . + 0 Parent=GSCOCT00024521001 | |
| 31678 chr10 manual_curation CDS 570852 570953 . + 0 Parent=GSCOCT00024521001 | |
| 31679 chr10 manual_curation CDS 571425 571492 . + 0 Parent=GSCOCT00024521001 | |
| 31680 chr10 manual_curation CDS 571632 571713 . + 2 Parent=GSCOCT00024521001 | |
| 31681 chr10 manual_curation CDS 571913 572029 . + 0 Parent=GSCOCT00024521001 | |
| 31682 chr10 manual_curation CDS 572528 572770 . + 0 Parent=GSCOCT00024521001 | |
| 31683 chr10 manual_curation gene 573502 574855 . - . ID=GSCOCG00024522001;Name=Cc10_g00650 | |
| 31684 chr10 manual_curation mRNA 573502 574855 . - . ID=GSCOCT00024522001;Parent=GSCOCG00024522001;Name=Cc10_g00650 | |
| 31685 chr10 manual_curation polypeptide 573859 574639 . - . ID=GSCOCP00024522001;Dbxref=TAIR:AT5G42330.1,TrEMBL:B9GQ14,TrEMBL:B9H5H3,TrEMBL:E0CQR0;Derives_from=GSCOCT00024522001;Name=Cc10_g00650;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B Has 35333 Blast hits to 34131 proteins in 2444 species,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024522001~ Putative unknown protein%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(574531..574639%2C573859..574406));owner=coffea | |
| 31686 chr10 manual_curation exon 573502 574406 . - . Parent=GSCOCT00024522001 | |
| 31687 chr10 manual_curation exon 574531 574855 . - . Parent=GSCOCT00024522001 | |
| 31688 chr10 manual_curation CDS 573859 574406 . - 1 Parent=GSCOCT00024522001 | |
| 31689 chr10 manual_curation CDS 574531 574639 . - 0 Parent=GSCOCT00024522001 | |
| 31690 chr10 manual_curation gene 576441 578982 . + . ID=GSCOCG00024523001;Name=Cc10_g00660 | |
| 31691 chr10 manual_curation mRNA 576441 578982 . + . ID=GSCOCT00024523001;Parent=GSCOCG00024523001;Name=Cc10_g00660 | |
| 31692 chr10 manual_curation polypeptide 576441 578982 . + . ID=GSCOCP00024523001;Dbxref=InterPro:IPR020946,PFAM:PF00743,SwissProt:Q95LA1,SwissProt:Q9FKE7,SwissProt:Q9LMA1,TAIR:AT1G19250.1,TAIR:AT1G65860.1,TAIR:AT5G45180.1,TrEMBL:B9H5H1,TrEMBL:B9R8M4,TrEMBL:F6I6S7;Derives_from=GSCOCT00024523001;Name=Cc10_g00660;Ontology_term=CC_evidence_code:ISS,GO:0004499,GO:0050660,GO:0050661,GO:0055114,CC_EC_number:1.14.13.8,PRODUCT:Putative Probable flavin-containing monooxygenase 1,CC_functional_completeness:complete,CC_gene:FMO1,CC_gene:FMO2,CC_gene:FMO3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024523001~ Putative Probable flavin-containing monooxygenase 1~ FMO1~ complete;original_location=join(576441..576932%2C577347..577578%2C577761..577927%2C578161..578277%2C578433..578512%2C578616..578982);owner=coffea | |
| 31693 chr10 manual_curation exon 576441 576932 . + . Parent=GSCOCT00024523001 | |
| 31694 chr10 manual_curation exon 577347 577578 . + . Parent=GSCOCT00024523001 | |
| 31695 chr10 manual_curation exon 577761 577927 . + . Parent=GSCOCT00024523001 | |
| 31696 chr10 manual_curation exon 578161 578277 . + . Parent=GSCOCT00024523001 | |
| 31697 chr10 manual_curation exon 578433 578512 . + . Parent=GSCOCT00024523001 | |
| 31698 chr10 manual_curation exon 578616 578982 . + . Parent=GSCOCT00024523001 | |
| 31699 chr10 manual_curation CDS 576441 576932 . + 0 Parent=GSCOCT00024523001 | |
| 31700 chr10 manual_curation CDS 577347 577578 . + 0 Parent=GSCOCT00024523001 | |
| 31701 chr10 manual_curation CDS 577761 577927 . + 1 Parent=GSCOCT00024523001 | |
| 31702 chr10 manual_curation CDS 578161 578277 . + 0 Parent=GSCOCT00024523001 | |
| 31703 chr10 manual_curation CDS 578433 578512 . + 0 Parent=GSCOCT00024523001 | |
| 31704 chr10 manual_curation CDS 578616 578982 . + 2 Parent=GSCOCT00024523001 | |
| 31705 chr10 manual_curation gene 587589 592425 . + . ID=GSCOCG00024524001;Name=Cc10_g00670 | |
| 31706 chr10 manual_curation mRNA 587589 592425 . + . ID=GSCOCT00024524001;Parent=GSCOCG00024524001;Name=Cc10_g00670 | |
| 31707 chr10 manual_curation polypeptide 587827 592195 . + . ID=GSCOCP00024524001;Dbxref=InterPro:IPR000834,PFAM:PF00246,SMART:SM00631,TAIR:AT5G42320.1,TrEMBL:B9H5G8,TrEMBL:B9R8M1,TrEMBL:D7UD93;Derives_from=GSCOCT00024524001;Name=Cc10_g00670;Ontology_term=CC_evidence_code:ISS,GO:0004181,GO:0006508,GO:0008270,CC_EC_number:3.4.17.1,PRODUCT:Zn-dependent exopeptidases superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024524001~ Zn-dependent exopeptidases superfamily protein~ unknown_gene~ complete;original_location=join(587827..588011%2C588393..588450%2C588550..588660%2C589054..589191%2C589572..589641%2C589724..589779%2C590059..590184%2C590893..591032%2C591485..591557%2C591647..591721%2C591884..592195);owner=coffea | |
| 31708 chr10 manual_curation exon 587589 588011 . + . Parent=GSCOCT00024524001 | |
| 31709 chr10 manual_curation exon 588393 588450 . + . Parent=GSCOCT00024524001 | |
| 31710 chr10 manual_curation exon 588550 588660 . + . Parent=GSCOCT00024524001 | |
| 31711 chr10 manual_curation exon 589054 589191 . + . Parent=GSCOCT00024524001 | |
| 31712 chr10 manual_curation exon 589572 589641 . + . Parent=GSCOCT00024524001 | |
| 31713 chr10 manual_curation exon 589724 589779 . + . Parent=GSCOCT00024524001 | |
| 31714 chr10 manual_curation exon 590059 590184 . + . Parent=GSCOCT00024524001 | |
| 31715 chr10 manual_curation exon 590893 591032 . + . Parent=GSCOCT00024524001 | |
| 31716 chr10 manual_curation exon 591485 591557 . + . Parent=GSCOCT00024524001 | |
| 31717 chr10 manual_curation exon 591647 591721 . + . Parent=GSCOCT00024524001 | |
| 31718 chr10 manual_curation exon 591884 592425 . + . Parent=GSCOCT00024524001 | |
| 31719 chr10 manual_curation CDS 587827 588011 . + 0 Parent=GSCOCT00024524001 | |
| 31720 chr10 manual_curation CDS 588393 588450 . + 2 Parent=GSCOCT00024524001 | |
| 31721 chr10 manual_curation CDS 588550 588660 . + 0 Parent=GSCOCT00024524001 | |
| 31722 chr10 manual_curation CDS 589054 589191 . + 0 Parent=GSCOCT00024524001 | |
| 31723 chr10 manual_curation CDS 589572 589641 . + 0 Parent=GSCOCT00024524001 | |
| 31724 chr10 manual_curation CDS 589724 589779 . + 1 Parent=GSCOCT00024524001 | |
| 31725 chr10 manual_curation CDS 590059 590184 . + 0 Parent=GSCOCT00024524001 | |
| 31726 chr10 manual_curation CDS 590893 591032 . + 0 Parent=GSCOCT00024524001 | |
| 31727 chr10 manual_curation CDS 591485 591557 . + 2 Parent=GSCOCT00024524001 | |
| 31728 chr10 manual_curation CDS 591647 591721 . + 0 Parent=GSCOCT00024524001 | |
| 31729 chr10 manual_curation CDS 591884 592195 . + 0 Parent=GSCOCT00024524001 | |
| 31730 chr10 manual_curation gene 592609 597663 . - . ID=GSCOCG00024525001;Name=Cc10_g00680 | |
| 31731 chr10 manual_curation mRNA 592609 597663 . - . ID=GSCOCT00024525001;Parent=GSCOCG00024525001;Name=Cc10_g00680 | |
| 31732 chr10 manual_curation polypeptide 593445 597663 . - . ID=GSCOCP00024525001;Dbxref=InterPro:IPR002885,InterPro:IPR010418,PFAM:PF01535,PFAM:PF06239,PROFILE:PS51375,SwissProt:Q6NQ83,SwissProt:Q76C99,SwissProt:Q8L844,TAIR:AT2G18940.1,TAIR:AT3G22470.1,TAIR:AT5G42310.1,TIGRFAMs:TIGR00756,TrEMBL:B9H5G7,TrEMBL:D7MTG0,TrEMBL:D7UD94;Derives_from=GSCOCT00024525001;Name=Cc10_g00680;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At5g42310%2C mitochondrial,CC_functional_completeness:complete,CC_gene:At5g42310,CC_gene:At3g22470,CC_gene:Rf1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024525001~ Pentatricopeptide repeat-containing protein At5g42310%2C mitochondrial~ At5g42310~ complete;original_location=complement(join(595792..597663%2C594965..595117%2C594601..594672%2C593445..593555));owner=coffea | |
| 31733 chr10 manual_curation exon 592609 593555 . - . Parent=GSCOCT00024525001 | |
| 31734 chr10 manual_curation exon 594601 594672 . - . Parent=GSCOCT00024525001 | |
| 31735 chr10 manual_curation exon 594965 595117 . - . Parent=GSCOCT00024525001 | |
| 31736 chr10 manual_curation exon 595792 597663 . - . Parent=GSCOCT00024525001 | |
| 31737 chr10 manual_curation CDS 593445 593555 . - 0 Parent=GSCOCT00024525001 | |
| 31738 chr10 manual_curation CDS 594601 594672 . - 0 Parent=GSCOCT00024525001 | |
| 31739 chr10 manual_curation CDS 594965 595117 . - 0 Parent=GSCOCT00024525001 | |
| 31740 chr10 manual_curation CDS 595792 597663 . - 0 Parent=GSCOCT00024525001 | |
| 31741 chr10 manual_curation gene 598294 605555 . + . ID=GSCOCG00024526001;Name=Cc10_g00690 | |
| 31742 chr10 manual_curation mRNA 598294 605555 . + . ID=GSCOCT00024526001;Parent=GSCOCG00024526001;Name=Cc10_g00690 | |
| 31743 chr10 manual_curation polypeptide 598361 605088 . + . ID=GSCOCP00024526001;Dbxref=InterPro:IPR007034,InterPro:IPR012948,PFAM:PF04950,PFAM:PF08142,SMART:SM00785,SwissProt:Q5R434,SwissProt:Q5SWD9,SwissProt:Q5XGY1,TAIR:AT1G06720.1,TAIR:AT1G42440.1,TrEMBL:B9H5G6,TrEMBL:B9R8L9,TrEMBL:D7UD95;Derives_from=GSCOCT00024526001;Name=Cc10_g00690;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0042254,CC_EC_number:missing_EC_number,PRODUCT:Putative Pre-rRNA-processing protein TSR1 homolog,CC_functional_completeness:complete,CC_gene:tsr1,CC_gene:Tsr1,CC_gene:TSR1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024526001~ Putative Pre-rRNA-processing protein TSR1 homolog~ tsr1~ complete;original_location=join(598361..598451%2C598535..598611%2C598735..598812%2C598903..599034%2C599500..599550%2C599633..599776%2C599868..599990%2C600162..600239%2C600493..600585%2C600657..600776%2C601176..601259%2C601591..601689%2C601794..601988%2C602369..602444%2C603215..603318%2C603404..603663%2C603767..603853%2C603958..604188%2C604303..604381%2C604450..604513%2C604970..605088);owner=coffea | |
| 31744 chr10 manual_curation exon 598294 598451 . + . Parent=GSCOCT00024526001 | |
| 31745 chr10 manual_curation exon 598535 598611 . + . Parent=GSCOCT00024526001 | |
| 31746 chr10 manual_curation exon 598735 598812 . + . Parent=GSCOCT00024526001 | |
| 31747 chr10 manual_curation exon 598903 599034 . + . Parent=GSCOCT00024526001 | |
| 31748 chr10 manual_curation exon 599500 599550 . + . Parent=GSCOCT00024526001 | |
| 31749 chr10 manual_curation exon 599633 599776 . + . Parent=GSCOCT00024526001 | |
| 31750 chr10 manual_curation exon 599868 599990 . + . Parent=GSCOCT00024526001 | |
| 31751 chr10 manual_curation exon 600162 600239 . + . Parent=GSCOCT00024526001 | |
| 31752 chr10 manual_curation exon 600493 600585 . + . Parent=GSCOCT00024526001 | |
| 31753 chr10 manual_curation exon 600657 600776 . + . Parent=GSCOCT00024526001 | |
| 31754 chr10 manual_curation exon 601176 601259 . + . Parent=GSCOCT00024526001 | |
| 31755 chr10 manual_curation exon 601591 601689 . + . Parent=GSCOCT00024526001 | |
| 31756 chr10 manual_curation exon 601794 601988 . + . Parent=GSCOCT00024526001 | |
| 31757 chr10 manual_curation exon 602369 602444 . + . Parent=GSCOCT00024526001 | |
| 31758 chr10 manual_curation exon 603215 603318 . + . Parent=GSCOCT00024526001 | |
| 31759 chr10 manual_curation exon 603404 603663 . + . Parent=GSCOCT00024526001 | |
| 31760 chr10 manual_curation exon 603767 603853 . + . Parent=GSCOCT00024526001 | |
| 31761 chr10 manual_curation exon 603958 604188 . + . Parent=GSCOCT00024526001 | |
| 31762 chr10 manual_curation exon 604303 604381 . + . Parent=GSCOCT00024526001 | |
| 31763 chr10 manual_curation exon 604450 604513 . + . Parent=GSCOCT00024526001 | |
| 31764 chr10 manual_curation exon 604970 605555 . + . Parent=GSCOCT00024526001 | |
| 31765 chr10 manual_curation CDS 598361 598451 . + 0 Parent=GSCOCT00024526001 | |
| 31766 chr10 manual_curation CDS 598535 598611 . + 1 Parent=GSCOCT00024526001 | |
| 31767 chr10 manual_curation CDS 598735 598812 . + 0 Parent=GSCOCT00024526001 | |
| 31768 chr10 manual_curation CDS 598903 599034 . + 0 Parent=GSCOCT00024526001 | |
| 31769 chr10 manual_curation CDS 599500 599550 . + 0 Parent=GSCOCT00024526001 | |
| 31770 chr10 manual_curation CDS 599633 599776 . + 0 Parent=GSCOCT00024526001 | |
| 31771 chr10 manual_curation CDS 599868 599990 . + 0 Parent=GSCOCT00024526001 | |
| 31772 chr10 manual_curation CDS 600162 600239 . + 0 Parent=GSCOCT00024526001 | |
| 31773 chr10 manual_curation CDS 600493 600585 . + 0 Parent=GSCOCT00024526001 | |
| 31774 chr10 manual_curation CDS 600657 600776 . + 0 Parent=GSCOCT00024526001 | |
| 31775 chr10 manual_curation CDS 601176 601259 . + 0 Parent=GSCOCT00024526001 | |
| 31776 chr10 manual_curation CDS 601591 601689 . + 0 Parent=GSCOCT00024526001 | |
| 31777 chr10 manual_curation CDS 601794 601988 . + 0 Parent=GSCOCT00024526001 | |
| 31778 chr10 manual_curation CDS 602369 602444 . + 0 Parent=GSCOCT00024526001 | |
| 31779 chr10 manual_curation CDS 603215 603318 . + 1 Parent=GSCOCT00024526001 | |
| 31780 chr10 manual_curation CDS 603404 603663 . + 0 Parent=GSCOCT00024526001 | |
| 31781 chr10 manual_curation CDS 603767 603853 . + 2 Parent=GSCOCT00024526001 | |
| 31782 chr10 manual_curation CDS 603958 604188 . + 2 Parent=GSCOCT00024526001 | |
| 31783 chr10 manual_curation CDS 604303 604381 . + 2 Parent=GSCOCT00024526001 | |
| 31784 chr10 manual_curation CDS 604450 604513 . + 0 Parent=GSCOCT00024526001 | |
| 31785 chr10 manual_curation CDS 604970 605088 . + 1 Parent=GSCOCT00024526001 | |
| 31786 chr10 manual_curation gene 605636 610531 . - . ID=GSCOCG00024527001;Name=Cc10_g00700 | |
| 31787 chr10 manual_curation mRNA 605636 610531 . - . ID=GSCOCT00024527001;Parent=GSCOCG00024527001;Name=Cc10_g00700 | |
| 31788 chr10 manual_curation polypeptide 606004 610242 . - . ID=GSCOCP00024527001;Dbxref=TAIR:AT1G63610.2,TAIR:AT2G14910.1,TAIR:AT5G14970.1,TrEMBL:C6TGY6,TrEMBL:F6H0B1,TrEMBL:I1JSW2;Derives_from=GSCOCT00024527001;Name=Cc10_g00700;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024527001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14910.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(609973..610242%2C609759..609848%2C609186..609266%2C608924..609055%2C607051..607269%2C606606..606698%2C606004..606165));owner=coffea | |
| 31789 chr10 manual_curation exon 605636 606165 . - . Parent=GSCOCT00024527001 | |
| 31790 chr10 manual_curation exon 606606 606698 . - . Parent=GSCOCT00024527001 | |
| 31791 chr10 manual_curation exon 607051 607269 . - . Parent=GSCOCT00024527001 | |
| 31792 chr10 manual_curation exon 608924 609055 . - . Parent=GSCOCT00024527001 | |
| 31793 chr10 manual_curation exon 609186 609266 . - . Parent=GSCOCT00024527001 | |
| 31794 chr10 manual_curation exon 609759 609848 . - . Parent=GSCOCT00024527001 | |
| 31795 chr10 manual_curation exon 609973 610531 . - . Parent=GSCOCT00024527001 | |
| 31796 chr10 manual_curation CDS 606004 606165 . - 0 Parent=GSCOCT00024527001 | |
| 31797 chr10 manual_curation CDS 606606 606698 . - 0 Parent=GSCOCT00024527001 | |
| 31798 chr10 manual_curation CDS 607051 607269 . - 0 Parent=GSCOCT00024527001 | |
| 31799 chr10 manual_curation CDS 608924 609055 . - 0 Parent=GSCOCT00024527001 | |
| 31800 chr10 manual_curation CDS 609186 609266 . - 0 Parent=GSCOCT00024527001 | |
| 31801 chr10 manual_curation CDS 609759 609848 . - 0 Parent=GSCOCT00024527001 | |
| 31802 chr10 manual_curation CDS 609973 610242 . - 0 Parent=GSCOCT00024527001 | |
| 31803 chr10 manual_curation gene 616676 622358 . + . ID=GSCOCG00024528001;Name=Cc10_g00710 | |
| 31804 chr10 manual_curation mRNA 616676 622358 . + . ID=GSCOCT00024528001;Parent=GSCOCG00024528001;Name=Cc10_g00710 | |
| 31805 chr10 manual_curation polypeptide 616972 621372 . + . ID=GSCOCP00024528001;Dbxref=InterPro:IPR019378,PFAM:PF10250,SwissProt:Q8W486,TAIR:AT1G20550.1,TAIR:AT1G76270.1,TAIR:AT4G38390.1,TrEMBL:B9GQ23,TrEMBL:D7KTB7,TrEMBL:Q949U4;Derives_from=GSCOCT00024528001;Name=Cc10_g00710;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative DUF246 domain-containing protein At1g04910,CC_functional_completeness:modules,CC_gene:At1g04910;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024528001~ Putative DUF246 domain-containing protein At1g04910~ At1g04910~ modules;original_location=join(616972..617148%2C617287..617358%2C617476..617566%2C617757..617833%2C618418..618506%2C618677..618860%2C619465..619646%2C620062..620164%2C620496..620827%2C620925..621372);owner=coffea | |
| 31806 chr10 manual_curation exon 616676 617148 . + . Parent=GSCOCT00024528001 | |
| 31807 chr10 manual_curation exon 617287 617358 . + . Parent=GSCOCT00024528001 | |
| 31808 chr10 manual_curation exon 617476 617566 . + . Parent=GSCOCT00024528001 | |
| 31809 chr10 manual_curation exon 617757 617833 . + . Parent=GSCOCT00024528001 | |
| 31810 chr10 manual_curation exon 618418 618506 . + . Parent=GSCOCT00024528001 | |
| 31811 chr10 manual_curation exon 618677 618860 . + . Parent=GSCOCT00024528001 | |
| 31812 chr10 manual_curation exon 619465 619646 . + . Parent=GSCOCT00024528001 | |
| 31813 chr10 manual_curation exon 620062 620164 . + . Parent=GSCOCT00024528001 | |
| 31814 chr10 manual_curation exon 620496 620827 . + . Parent=GSCOCT00024528001 | |
| 31815 chr10 manual_curation exon 620925 622358 . + . Parent=GSCOCT00024528001 | |
| 31816 chr10 manual_curation CDS 616972 617148 . + 0 Parent=GSCOCT00024528001 | |
| 31817 chr10 manual_curation CDS 617287 617358 . + 0 Parent=GSCOCT00024528001 | |
| 31818 chr10 manual_curation CDS 617476 617566 . + 0 Parent=GSCOCT00024528001 | |
| 31819 chr10 manual_curation CDS 617757 617833 . + 1 Parent=GSCOCT00024528001 | |
| 31820 chr10 manual_curation CDS 618418 618506 . + 0 Parent=GSCOCT00024528001 | |
| 31821 chr10 manual_curation CDS 618677 618860 . + 2 Parent=GSCOCT00024528001 | |
| 31822 chr10 manual_curation CDS 619465 619646 . + 0 Parent=GSCOCT00024528001 | |
| 31823 chr10 manual_curation CDS 620062 620164 . + 2 Parent=GSCOCT00024528001 | |
| 31824 chr10 manual_curation CDS 620496 620827 . + 0 Parent=GSCOCT00024528001 | |
| 31825 chr10 manual_curation CDS 620925 621372 . + 2 Parent=GSCOCT00024528001 | |
| 31826 chr10 manual_curation gene 622642 629086 . + . ID=GSCOCG00024529001;Name=Cc10_g00720 | |
| 31827 chr10 manual_curation mRNA 622642 629086 . + . ID=GSCOCT00024529001;Parent=GSCOCG00024529001;Name=Cc10_g00720 | |
| 31828 chr10 manual_curation polypeptide 623436 628777 . + . ID=GSCOCP00024529001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019775,InterPro:IPR019781,InterPro:IPR019782,PFAM:PF00400,PROFILE:PS50082,PROFILE:PS50294,PROSITE:PS00678,SMART:SM00320,SUPERFAMILY:SSF50978,SwissProt:Q3KPT3,SwissProt:Q6DUZ9,SwissProt:Q6NPN9,TAIR:AT1G20540.1,TAIR:AT1G76260.1,TrEMBL:B9GQ24,TrEMBL:B9H5G3,TrEMBL:E0CQR7;Derives_from=GSCOCT00024529001;Name=Cc10_g00720;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:WD repeat-containing protein DWA2,CC_functional_completeness:complete,CC_gene:DWA2,CC_gene:TSSC1,CC_gene:tssc1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024529001~ WD repeat-containing protein DWA2~ DWA2~ complete;original_location=join(623436..623480%2C623642..623725%2C623816..623948%2C624111..624222%2C624847..624946%2C626034..626161%2C626308..626377%2C627317..627405%2C627655..627700%2C627808..627881%2C627973..628043%2C628113..628171%2C628736..628777);owner=coffea | |
| 31829 chr10 manual_curation exon 628917 629086 . + . Parent=GSCOCT00024529001 | |
| 31830 chr10 manual_curation exon 622642 623480 . + . Parent=GSCOCT00024529001 | |
| 31831 chr10 manual_curation exon 623642 623725 . + . Parent=GSCOCT00024529001 | |
| 31832 chr10 manual_curation exon 623816 623948 . + . Parent=GSCOCT00024529001 | |
| 31833 chr10 manual_curation exon 624111 624222 . + . Parent=GSCOCT00024529001 | |
| 31834 chr10 manual_curation exon 624847 624946 . + . Parent=GSCOCT00024529001 | |
| 31835 chr10 manual_curation exon 626034 626161 . + . Parent=GSCOCT00024529001 | |
| 31836 chr10 manual_curation exon 626308 626377 . + . Parent=GSCOCT00024529001 | |
| 31837 chr10 manual_curation exon 627317 627405 . + . Parent=GSCOCT00024529001 | |
| 31838 chr10 manual_curation exon 627655 627700 . + . Parent=GSCOCT00024529001 | |
| 31839 chr10 manual_curation exon 627808 627881 . + . Parent=GSCOCT00024529001 | |
| 31840 chr10 manual_curation exon 627973 628043 . + . Parent=GSCOCT00024529001 | |
| 31841 chr10 manual_curation exon 628113 628171 . + . Parent=GSCOCT00024529001 | |
| 31842 chr10 manual_curation exon 628736 628802 . + . Parent=GSCOCT00024529001 | |
| 31843 chr10 manual_curation CDS 623436 623480 . + 0 Parent=GSCOCT00024529001 | |
| 31844 chr10 manual_curation CDS 623642 623725 . + 0 Parent=GSCOCT00024529001 | |
| 31845 chr10 manual_curation CDS 623816 623948 . + 0 Parent=GSCOCT00024529001 | |
| 31846 chr10 manual_curation CDS 624111 624222 . + 1 Parent=GSCOCT00024529001 | |
| 31847 chr10 manual_curation CDS 624847 624946 . + 2 Parent=GSCOCT00024529001 | |
| 31848 chr10 manual_curation CDS 626034 626161 . + 0 Parent=GSCOCT00024529001 | |
| 31849 chr10 manual_curation CDS 626308 626377 . + 2 Parent=GSCOCT00024529001 | |
| 31850 chr10 manual_curation CDS 627317 627405 . + 0 Parent=GSCOCT00024529001 | |
| 31851 chr10 manual_curation CDS 627655 627700 . + 2 Parent=GSCOCT00024529001 | |
| 31852 chr10 manual_curation CDS 627808 627881 . + 0 Parent=GSCOCT00024529001 | |
| 31853 chr10 manual_curation CDS 627973 628043 . + 2 Parent=GSCOCT00024529001 | |
| 31854 chr10 manual_curation CDS 628113 628171 . + 1 Parent=GSCOCT00024529001 | |
| 31855 chr10 manual_curation CDS 628736 628777 . + 0 Parent=GSCOCT00024529001 | |
| 31856 chr10 manual_curation gene 632019 638231 . + . ID=GSCOCG00024531001;Name=Cc10_g00730 | |
| 31857 chr10 manual_curation mRNA 632019 638231 . + . ID=GSCOCT00024531001;Parent=GSCOCG00024531001;Name=Cc10_g00730 | |
| 31858 chr10 manual_curation polypeptide 632276 638001 . + . ID=GSCOCP00024531001;Dbxref=TAIR:AT1G42430.1,TAIR:AT3G55760.1,TrEMBL:B9R8L3,TrEMBL:F6H0B2,TrEMBL:I1K7E2;Derives_from=GSCOCT00024531001;Name=Cc10_g00730;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024531001~ unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55760.3)%3B Has 186 Blast hits to 143 proteins in 47 species: Archae - 0%3B Bacteria - 23%3B Metazoa - 14%3B Fungi - 6%3B Plants - 87%3B Viruses - 0%3B Other Eukaryotes - 56 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(632276..632616%2C633375..633466%2C633636..633829%2C635161..635200%2C635316..635397%2C635537..635614%2C635715..635840%2C636581..636702%2C637302..637341%2C637535..637609%2C637833..638001);owner=coffea | |
| 31859 chr10 manual_curation exon 632019 632616 . + . Parent=GSCOCT00024531001 | |
| 31860 chr10 manual_curation exon 633375 633466 . + . Parent=GSCOCT00024531001 | |
| 31861 chr10 manual_curation exon 633636 633829 . + . Parent=GSCOCT00024531001 | |
| 31862 chr10 manual_curation exon 635161 635200 . + . Parent=GSCOCT00024531001 | |
| 31863 chr10 manual_curation exon 635316 635397 . + . Parent=GSCOCT00024531001 | |
| 31864 chr10 manual_curation exon 635537 635614 . + . Parent=GSCOCT00024531001 | |
| 31865 chr10 manual_curation exon 635715 635840 . + . Parent=GSCOCT00024531001 | |
| 31866 chr10 manual_curation exon 636581 636702 . + . Parent=GSCOCT00024531001 | |
| 31867 chr10 manual_curation exon 637302 637341 . + . Parent=GSCOCT00024531001 | |
| 31868 chr10 manual_curation exon 637535 637609 . + . Parent=GSCOCT00024531001 | |
| 31869 chr10 manual_curation exon 637833 638231 . + . Parent=GSCOCT00024531001 | |
| 31870 chr10 manual_curation CDS 632276 632616 . + 0 Parent=GSCOCT00024531001 | |
| 31871 chr10 manual_curation CDS 633375 633466 . + 2 Parent=GSCOCT00024531001 | |
| 31872 chr10 manual_curation CDS 633636 633829 . + 1 Parent=GSCOCT00024531001 | |
| 31873 chr10 manual_curation CDS 635161 635200 . + 0 Parent=GSCOCT00024531001 | |
| 31874 chr10 manual_curation CDS 635316 635397 . + 1 Parent=GSCOCT00024531001 | |
| 31875 chr10 manual_curation CDS 635537 635614 . + 2 Parent=GSCOCT00024531001 | |
| 31876 chr10 manual_curation CDS 635715 635840 . + 2 Parent=GSCOCT00024531001 | |
| 31877 chr10 manual_curation CDS 636581 636702 . + 2 Parent=GSCOCT00024531001 | |
| 31878 chr10 manual_curation CDS 637302 637341 . + 1 Parent=GSCOCT00024531001 | |
| 31879 chr10 manual_curation CDS 637535 637609 . + 2 Parent=GSCOCT00024531001 | |
| 31880 chr10 manual_curation CDS 637833 638001 . + 2 Parent=GSCOCT00024531001 | |
| 31881 chr10 manual_curation gene 639873 642971 . + . ID=GSCOCG00024532001;Name=Cc10_g00740 | |
| 31882 chr10 manual_curation mRNA 639873 642971 . + . ID=GSCOCT00024532001;Parent=GSCOCG00024532001;Name=Cc10_g00740 | |
| 31883 chr10 manual_curation polypeptide 640446 642971 . + . ID=GSCOCP00024532001;Dbxref=TAIR:AT1G76250.1,TrEMBL:B9H5G0,TrEMBL:B9R8L2,TrEMBL:E0CQR8;Derives_from=GSCOCT00024532001;Name=Cc10_g00740;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B INVOLVED IN,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024532001~ unknown protein%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 6 plant structures%3B EXPRESSED DURING: 4 anthesis%2C petal differentiation and expansion stage%3B Has 74 Blast hits to 74 proteins in 16 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 1%3B Fungi - 0%3B Plants - 69%3B Viruses - 0%3B Other Eukaryotes - 4 (source: NCBI BLink).~ unknown_gene~ fragment;original_location=join(640446..640931%2C642195..642971);owner=coffea | |
| 31884 chr10 manual_curation exon 639873 640931 . + . Parent=GSCOCT00024532001 | |
| 31885 chr10 manual_curation exon 642195 642971 . + . Parent=GSCOCT00024532001 | |
| 31886 chr10 manual_curation CDS 640446 640931 . + 0 Parent=GSCOCT00024532001 | |
| 31887 chr10 manual_curation CDS 642195 642971 . + 0 Parent=GSCOCT00024532001 | |
| 31888 chr10 manual_curation gene 643190 647965 . - . ID=GSCOCG00024533001;Name=Cc10_g00750 | |
| 31889 chr10 manual_curation mRNA 643190 647965 . - . ID=GSCOCT00024533001;Parent=GSCOCG00024533001;Name=Cc10_g00750 | |
| 31890 chr10 manual_curation polypeptide 643420 647589 . - . ID=GSCOCP00024533001;Dbxref=InterPro:IPR002085,InterPro:IPR002328,InterPro:IPR011032,InterPro:IPR013149,InterPro:IPR013154,PANTHER:PTHR11695,PFAM:PF00107,PFAM:PF08240,PROSITE:PS00059,SUPERFAMILY:SSF50129,SwissProt:Q0V7W6,SwissProt:Q9FH04,SwissProt:Q9SK86,TAIR:AT1G22430.1,TAIR:AT4G22110.1,TAIR:AT5G42250.1,TrEMBL:E0CQT3,TrEMBL:F6H0C5,TrEMBL:Q41241;Derives_from=GSCOCT00024533001;Name=Cc10_g00750;Ontology_term=CC_evidence_code:ISS,GO:0008270,GO:0016491,GO:0055114,CC_EC_number:1.1.1.284,PRODUCT:Alcohol dehydrogenase-like 7,CC_functional_completeness:complete,CC_gene:At5g42250,CC_gene:At4g22110,CC_gene:At1g22430;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024533001~ Alcohol dehydrogenase-like 7~ At5g42250~ complete;original_location=complement(join(647532..647589%2C647153..647289%2C646944..646990%2C645572..645897%2C645111..645193%2C644917..645004%2C644696..644760%2C644249..644344%2C643693..643857%2C643420..643536));owner=coffea | |
| 31891 chr10 manual_curation exon 643190 643536 . - . Parent=GSCOCT00024533001 | |
| 31892 chr10 manual_curation exon 643693 643857 . - . Parent=GSCOCT00024533001 | |
| 31893 chr10 manual_curation exon 644249 644344 . - . Parent=GSCOCT00024533001 | |
| 31894 chr10 manual_curation exon 644696 644760 . - . Parent=GSCOCT00024533001 | |
| 31895 chr10 manual_curation exon 644917 645004 . - . Parent=GSCOCT00024533001 | |
| 31896 chr10 manual_curation exon 645111 645193 . - . Parent=GSCOCT00024533001 | |
| 31897 chr10 manual_curation exon 645572 645897 . - . Parent=GSCOCT00024533001 | |
| 31898 chr10 manual_curation exon 646944 646990 . - . Parent=GSCOCT00024533001 | |
| 31899 chr10 manual_curation exon 647153 647289 . - . Parent=GSCOCT00024533001 | |
| 31900 chr10 manual_curation exon 647532 647965 . - . Parent=GSCOCT00024533001 | |
| 31901 chr10 manual_curation CDS 643420 643536 . - 0 Parent=GSCOCT00024533001 | |
| 31902 chr10 manual_curation CDS 643693 643857 . - 0 Parent=GSCOCT00024533001 | |
| 31903 chr10 manual_curation CDS 644249 644344 . - 0 Parent=GSCOCT00024533001 | |
| 31904 chr10 manual_curation CDS 644696 644760 . - 1 Parent=GSCOCT00024533001 | |
| 31905 chr10 manual_curation CDS 644917 645004 . - 0 Parent=GSCOCT00024533001 | |
| 31906 chr10 manual_curation CDS 645111 645193 . - 1 Parent=GSCOCT00024533001 | |
| 31907 chr10 manual_curation CDS 645572 645897 . - 2 Parent=GSCOCT00024533001 | |
| 31908 chr10 manual_curation CDS 646944 646990 . - 0 Parent=GSCOCT00024533001 | |
| 31909 chr10 manual_curation CDS 647153 647289 . - 1 Parent=GSCOCT00024533001 | |
| 31910 chr10 manual_curation CDS 647532 647589 . - 0 Parent=GSCOCT00024533001 | |
| 31911 chr10 manual_curation gene 651809 652999 . + . ID=GSCOCG00024535001;Name=Cc10_g00760 | |
| 31912 chr10 manual_curation mRNA 651809 652999 . + . ID=GSCOCT00024535001;Parent=GSCOCG00024535001;Name=Cc10_g00760 | |
| 31913 chr10 manual_curation polypeptide 651809 652756 . + . ID=GSCOCP00024535001;Dbxref=InterPro:IPR004320,PFAM:PF03087,TAIR:AT1G76240.1,TAIR:AT2G17070.1,TAIR:AT2G17080.1,TrEMBL:B9H5F9,TrEMBL:B9R8L0,TrEMBL:F6H0B4;Derives_from=GSCOCT00024535001;Name=Cc10_g00760;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Arabidopsis protein of unknown function (DUF241),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024535001~ Putative Arabidopsis protein of unknown function (DUF241)~ unknown_gene~ complete;original_location=651809..652756;owner=coffea | |
| 31914 chr10 manual_curation exon 651809 652999 . + . Parent=GSCOCT00024535001 | |
| 31915 chr10 manual_curation CDS 651809 652756 . + 0 Parent=GSCOCT00024535001 | |
| 31916 chr10 manual_curation gene 655965 662086 . + . ID=GSCOCG00024536001;Name=Cc10_g00770 | |
| 31917 chr10 manual_curation mRNA 655965 662086 . + . ID=GSCOCT00024536001;Parent=GSCOCG00024536001;Name=Cc10_g00770 | |
| 31918 chr10 manual_curation polypeptide 656753 661996 . + . ID=GSCOCP00024536001;Dbxref=GENE3D:G3DSA:1.25.40.10,InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR011009,InterPro:IPR011990,InterPro:IPR020635,PFAM:PF07714,PROFILE:PS50011,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q7XJT7,SwissProt:Q944A7,SwissProt:Q9FHD7,TAIR:AT1G50990.1,TAIR:AT4G35230.1,TAIR:AT5G59010.1,TrEMBL:A5B2F1,TrEMBL:B9R8K7,TrEMBL:E0CQS1;Derives_from=GSCOCT00024536001;Name=Cc10_g00770;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005488,GO:0005524,GO:0006468,CC_EC_number:2.7.10.2,PRODUCT:Probable serine/threonine-protein kinase At4g35230,CC_functional_completeness:complete,CC_gene:At4g35230,CC_gene:At5g41260,CC_gene:SSP;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024536001~ Probable serine/threonine-protein kinase At4g35230~ At4g35230~ complete;original_location=join(656753..657073%2C657260..657395%2C658371..658504%2C658683..658788%2C659377..659462%2C660231..660419%2C660871..661035%2C661117..661230%2C661745..661996);owner=coffea | |
| 31919 chr10 manual_curation exon 655965 657073 . + . Parent=GSCOCT00024536001 | |
| 31920 chr10 manual_curation exon 657260 657395 . + . Parent=GSCOCT00024536001 | |
| 31921 chr10 manual_curation exon 658371 658504 . + . Parent=GSCOCT00024536001 | |
| 31922 chr10 manual_curation exon 658683 658788 . + . Parent=GSCOCT00024536001 | |
| 31923 chr10 manual_curation exon 659377 659462 . + . Parent=GSCOCT00024536001 | |
| 31924 chr10 manual_curation exon 660231 660419 . + . Parent=GSCOCT00024536001 | |
| 31925 chr10 manual_curation exon 660871 661035 . + . Parent=GSCOCT00024536001 | |
| 31926 chr10 manual_curation exon 661117 661230 . + . Parent=GSCOCT00024536001 | |
| 31927 chr10 manual_curation exon 661745 662086 . + . Parent=GSCOCT00024536001 | |
| 31928 chr10 manual_curation CDS 656753 657073 . + 0 Parent=GSCOCT00024536001 | |
| 31929 chr10 manual_curation CDS 657260 657395 . + 0 Parent=GSCOCT00024536001 | |
| 31930 chr10 manual_curation CDS 658371 658504 . + 1 Parent=GSCOCT00024536001 | |
| 31931 chr10 manual_curation CDS 658683 658788 . + 0 Parent=GSCOCT00024536001 | |
| 31932 chr10 manual_curation CDS 659377 659462 . + 1 Parent=GSCOCT00024536001 | |
| 31933 chr10 manual_curation CDS 660231 660419 . + 0 Parent=GSCOCT00024536001 | |
| 31934 chr10 manual_curation CDS 660871 661035 . + 0 Parent=GSCOCT00024536001 | |
| 31935 chr10 manual_curation CDS 661117 661230 . + 0 Parent=GSCOCT00024536001 | |
| 31936 chr10 manual_curation CDS 661745 661996 . + 0 Parent=GSCOCT00024536001 | |
| 31937 chr10 manual_curation gene 662145 665833 . - . ID=GSCOCG00024537001;Name=Cc10_g00780 | |
| 31938 chr10 manual_curation mRNA 662145 665833 . - . ID=GSCOCT00024537001;Parent=GSCOCG00024537001;Name=Cc10_g00780 | |
| 31939 chr10 manual_curation polypeptide 662243 665454 . - . ID=GSCOCP00024537001;Dbxref=InterPro:IPR000642,InterPro:IPR003593,InterPro:IPR003959,InterPro:IPR003960,InterPro:IPR005936,PFAM:PF00004,PFAM:PF01434,PROSITE:PS00674,SMART:SM00382,SwissProt:O82150,SwissProt:P72991,SwissProt:Q2JNP0,SwissProt:Q39102,SwissProt:Q5Z974,SwissProt:Q9BAE0,SwissProt:Q9FH02,TAIR:AT1G50250.1,TAIR:AT2G30950.1,TAIR:AT5G42270.1,TIGRFAMs:TIGR01241,TrEMBL:A1KXM7,TrEMBL:B9GQ31,TrEMBL:F6H0B6;Derives_from=GSCOCT00024537001;Name=Cc10_g00780;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0004222,GO:0005524,GO:0006508,GO:0016020,GO:0017111,GO:0030163,CC_EC_number:3.6.4.3,CC_EC_number:3.6.4.3,PRODUCT:ATP-dependent zinc metalloprotease FTSH%2C chloroplastic,CC_functional_completeness:complete,CC_gene:FTSH,CC_gene:FTSH5,CC_gene:FTSH1,CC_gene:ftsH3,CC_gene:ftsH;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024537001~ ATP-dependent zinc metalloprotease FTSH%2C chloroplastic~ FTSH~ complete;original_location=complement(join(664159..665454%2C663385..663631%2C663108..663291%2C662552..662723%2C662243..662464));owner=coffea | |
| 31940 chr10 manual_curation exon 662145 662464 . - . Parent=GSCOCT00024537001 | |
| 31941 chr10 manual_curation exon 662552 662723 . - . Parent=GSCOCT00024537001 | |
| 31942 chr10 manual_curation exon 663108 663291 . - . Parent=GSCOCT00024537001 | |
| 31943 chr10 manual_curation exon 663385 663631 . - . Parent=GSCOCT00024537001 | |
| 31944 chr10 manual_curation exon 664159 665833 . - . Parent=GSCOCT00024537001 | |
| 31945 chr10 manual_curation CDS 662243 662464 . - 0 Parent=GSCOCT00024537001 | |
| 31946 chr10 manual_curation CDS 662552 662723 . - 2 Parent=GSCOCT00024537001 | |
| 31947 chr10 manual_curation CDS 663108 663291 . - 1 Parent=GSCOCT00024537001 | |
| 31948 chr10 manual_curation CDS 663385 663631 . - 0 Parent=GSCOCT00024537001 | |
| 31949 chr10 manual_curation CDS 664159 665454 . - 0 Parent=GSCOCT00024537001 | |
| 31950 chr10 manual_curation gene 667690 668339 . - . ID=GSCOCG00024538001;Name=Cc10_g00790 | |
| 31951 chr10 manual_curation mRNA 667690 668339 . - . ID=GSCOCT00024538001;Parent=GSCOCG00024538001;Name=Cc10_g00790 | |
| 31952 chr10 manual_curation polypeptide 668033 668339 . - . ID=GSCOCP00024538001;Derives_from=GSCOCT00024538001;Name=Cc10_g00790;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024538001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(668277..668339%2C668033..668167));owner=coffea | |
| 31953 chr10 manual_curation exon 667690 668167 . - . Parent=GSCOCT00024538001 | |
| 31954 chr10 manual_curation exon 668277 668339 . - . Parent=GSCOCT00024538001 | |
| 31955 chr10 manual_curation CDS 668033 668167 . - 0 Parent=GSCOCT00024538001 | |
| 31956 chr10 manual_curation CDS 668277 668339 . - 0 Parent=GSCOCT00024538001 | |
| 31957 chr10 manual_curation gene 670016 670844 . - . ID=GSCOCG00024539001;Name=Cc10_g00800 | |
| 31958 chr10 manual_curation mRNA 670016 670844 . - . ID=GSCOCT00024539001;Parent=GSCOCG00024539001;Name=Cc10_g00800 | |
| 31959 chr10 manual_curation polypeptide 670016 670844 . - . ID=GSCOCP00024539001;Derives_from=GSCOCT00024539001;Name=Cc10_g00800;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024539001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(670265..670844%2C670178..670245%2C670016..670081));owner=coffea | |
| 31960 chr10 manual_curation exon 670016 670081 . - . Parent=GSCOCT00024539001 | |
| 31961 chr10 manual_curation exon 670178 670245 . - . Parent=GSCOCT00024539001 | |
| 31962 chr10 manual_curation exon 670265 670844 . - . Parent=GSCOCT00024539001 | |
| 31963 chr10 manual_curation CDS 670016 670081 . - 0 Parent=GSCOCT00024539001 | |
| 31964 chr10 manual_curation CDS 670178 670245 . - 1 Parent=GSCOCT00024539001 | |
| 31965 chr10 manual_curation CDS 670265 670844 . - 0 Parent=GSCOCT00024539001 | |
| 31966 chr10 manual_curation gene 672516 675627 . - . ID=GSCOCG00024540001;Name=Cc10_g00810 | |
| 31967 chr10 manual_curation mRNA 672516 675627 . - . ID=GSCOCT00024540001;Parent=GSCOCG00024540001;Name=Cc10_g00810 | |
| 31968 chr10 manual_curation polypeptide 672623 675585 . - . ID=GSCOCP00024540001;Dbxref=InterPro:IPR005269,PFAM:PF03641,SwissProt:B9F166,SwissProt:Q8LBB7,SwissProt:Q8RUN2,TAIR:AT2G28305.1,TAIR:AT4G35190.1,TAIR:AT5G06300.1,TIGRFAMs:TIGR00730,TrEMBL:A5B2E9,TrEMBL:B9R8K0,TrEMBL:F6H0B7;Derives_from=GSCOCT00024540001;Name=Cc10_g00810;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5,CC_functional_completeness:complete,CC_gene:LOG5,CC_gene:LOGL2,CC_gene:LOG1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024540001~ Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5~ LOG5~ complete;original_location=complement(join(675469..675585%2C673895..673992%2C673710..673740%2C673476..673575%2C673252..673322%2C672911..673054%2C672623..672721));owner=coffea | |
| 31969 chr10 manual_curation exon 672516 672721 . - . Parent=GSCOCT00024540001 | |
| 31970 chr10 manual_curation exon 672911 673054 . - . Parent=GSCOCT00024540001 | |
| 31971 chr10 manual_curation exon 673252 673322 . - . Parent=GSCOCT00024540001 | |
| 31972 chr10 manual_curation exon 673476 673575 . - . Parent=GSCOCT00024540001 | |
| 31973 chr10 manual_curation exon 673710 673740 . - . Parent=GSCOCT00024540001 | |
| 31974 chr10 manual_curation exon 673895 673992 . - . Parent=GSCOCT00024540001 | |
| 31975 chr10 manual_curation exon 675469 675627 . - . Parent=GSCOCT00024540001 | |
| 31976 chr10 manual_curation CDS 672623 672721 . - 0 Parent=GSCOCT00024540001 | |
| 31977 chr10 manual_curation CDS 672911 673054 . - 0 Parent=GSCOCT00024540001 | |
| 31978 chr10 manual_curation CDS 673252 673322 . - 1 Parent=GSCOCT00024540001 | |
| 31979 chr10 manual_curation CDS 673476 673575 . - 0 Parent=GSCOCT00024540001 | |
| 31980 chr10 manual_curation CDS 673710 673740 . - 2 Parent=GSCOCT00024540001 | |
| 31981 chr10 manual_curation CDS 673895 673992 . - 0 Parent=GSCOCT00024540001 | |
| 31982 chr10 manual_curation CDS 675469 675585 . - 0 Parent=GSCOCT00024540001 | |
| 31983 chr10 manual_curation gene 680283 681056 . + . ID=GSCOCG00024541001;Name=Cc10_g00820 | |
| 31984 chr10 manual_curation mRNA 680283 681056 . + . ID=GSCOCT00024541001;Parent=GSCOCG00024541001;Name=Cc10_g00820 | |
| 31985 chr10 manual_curation polypeptide 680283 681014 . + . ID=GSCOCP00024541001;Dbxref=InterPro:IPR004320,PFAM:PF03087,TAIR:AT1G20520.1,TAIR:AT1G76210.1,TAIR:AT4G35690.1,TrEMBL:B9H5F1,TrEMBL:I1L788,TrEMBL:I1NCX2;Derives_from=GSCOCT00024541001;Name=Cc10_g00820;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Arabidopsis protein of unknown function (DUF241),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024541001~ Putative Arabidopsis protein of unknown function (DUF241)~ unknown_gene~ complete;original_location=680283..681014;owner=coffea | |
| 31986 chr10 manual_curation exon 680283 681056 . + . Parent=GSCOCT00024541001 | |
| 31987 chr10 manual_curation CDS 680283 681014 . + 0 Parent=GSCOCT00024541001 | |
| 31988 chr10 manual_curation gene 681851 685426 . - . ID=GSCOCG00024542001;Name=Cc10_g00830 | |
| 31989 chr10 manual_curation mRNA 681851 685426 . - . ID=GSCOCT00024542001;Parent=GSCOCG00024542001;Name=Cc10_g00830 | |
| 31990 chr10 manual_curation polypeptide 682493 685321 . - . ID=GSCOCP00024542001;Dbxref=SwissProt:Q8LDK3,TAIR:AT1G76200.1,TrEMBL:B9H5F0,TrEMBL:G7JPJ0,TrEMBL:I1LPI3;Derives_from=GSCOCT00024542001;Name=Cc10_g00830;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Predicted protein,CC_functional_completeness:complete,CC_gene:At1g76200;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024542001~ Predicted protein~ At1g76200~ complete;original_location=complement(join(685215..685321%2C682650..682695%2C682493..682555));owner=coffea | |
| 31991 chr10 manual_curation exon 681851 682555 . - . Parent=GSCOCT00024542001 | |
| 31992 chr10 manual_curation exon 682650 682695 . - . Parent=GSCOCT00024542001 | |
| 31993 chr10 manual_curation exon 685215 685426 . - . Parent=GSCOCT00024542001 | |
| 31994 chr10 manual_curation CDS 682493 682555 . - 0 Parent=GSCOCT00024542001 | |
| 31995 chr10 manual_curation CDS 682650 682695 . - 2 Parent=GSCOCT00024542001 | |
| 31996 chr10 manual_curation CDS 685215 685321 . - 0 Parent=GSCOCT00024542001 | |
| 31997 chr10 manual_curation gene 687795 694883 . + . ID=GSCOCG00024543001;Name=Cc10_g00840 | |
| 31998 chr10 manual_curation mRNA 687795 694883 . + . ID=GSCOCT00024543001;Parent=GSCOCG00024543001;Name=Cc10_g00840 | |
| 31999 chr10 manual_curation polypeptide 688109 694486 . + . ID=GSCOCP00024543001;Dbxref=InterPro:IPR000873,InterPro:IPR020845,PFAM:PF00501,PROSITE:PS00455,SwissProt:P0C5B6,SwissProt:Q3E6Y4,SwissProt:Q84P21,TAIR:AT1G20480.1,TAIR:AT1G20500.1,TAIR:AT1G20510.1,TrEMBL:B9H5E9,TrEMBL:B9R8J7,TrEMBL:F6H0C0;Derives_from=GSCOCT00024543001;Name=Cc10_g00840;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,CC_EC_number:1.13.12.7,PRODUCT:4-coumarate--CoA ligase-like 5,CC_functional_completeness:complete,CC_gene:4CLL5,CC_gene:4CLL4,CC_gene:4CLL3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024543001~ 4-coumarate--CoA ligase-like 5~ 4CLL5~ complete;original_location=join(688109..689342%2C693695..693840%2C694030..694097%2C694174..694276%2C694373..694486);owner=coffea | |
| 32000 chr10 manual_curation exon 687795 689342 . + . Parent=GSCOCT00024543001 | |
| 32001 chr10 manual_curation exon 693695 693840 . + . Parent=GSCOCT00024543001 | |
| 32002 chr10 manual_curation exon 694030 694097 . + . Parent=GSCOCT00024543001 | |
| 32003 chr10 manual_curation exon 694174 694276 . + . Parent=GSCOCT00024543001 | |
| 32004 chr10 manual_curation exon 694373 694883 . + . Parent=GSCOCT00024543001 | |
| 32005 chr10 manual_curation CDS 688109 689342 . + 0 Parent=GSCOCT00024543001 | |
| 32006 chr10 manual_curation CDS 693695 693840 . + 1 Parent=GSCOCT00024543001 | |
| 32007 chr10 manual_curation CDS 694030 694097 . + 0 Parent=GSCOCT00024543001 | |
| 32008 chr10 manual_curation CDS 694174 694276 . + 2 Parent=GSCOCT00024543001 | |
| 32009 chr10 manual_curation CDS 694373 694486 . + 0 Parent=GSCOCT00024543001 | |
| 32010 chr10 manual_curation gene 698986 701751 . + . ID=GSCOCG00024545001;Name=Cc10_g00850 | |
| 32011 chr10 manual_curation mRNA 698986 701751 . + . ID=GSCOCT00024545001;Parent=GSCOCG00024545001;Name=Cc10_g00850 | |
| 32012 chr10 manual_curation polypeptide 699269 701571 . + . ID=GSCOCP00024545001;Dbxref=InterPro:IPR013057,PFAM:PF01490,SwissProt:Q84WE9,SwissProt:Q9FKS8,SwissProt:Q9SX98,TAIR:AT1G47670.1,TAIR:AT4G35180.1,TAIR:AT5G40780.1,TrEMBL:B9GQ40,TrEMBL:B9R8J4,TrEMBL:F6H0C2;Derives_from=GSCOCT00024545001;Name=Cc10_g00850;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Lysine histidine transporter-like 8,CC_functional_completeness:complete,CC_gene:AATL1,CC_gene:At4g35180,CC_gene:LHT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024545001~ Lysine histidine transporter-like 8~ AATL1~ complete;original_location=join(699269..699486%2C699666..699799%2C700036..700466%2C700807..700938%2C701083..701571);owner=coffea | |
| 32013 chr10 manual_curation exon 698986 699486 . + . Parent=GSCOCT00024545001 | |
| 32014 chr10 manual_curation exon 699666 699799 . + . Parent=GSCOCT00024545001 | |
| 32015 chr10 manual_curation exon 700036 700466 . + . Parent=GSCOCT00024545001 | |
| 32016 chr10 manual_curation exon 700807 700938 . + . Parent=GSCOCT00024545001 | |
| 32017 chr10 manual_curation exon 701083 701751 . + . Parent=GSCOCT00024545001 | |
| 32018 chr10 manual_curation CDS 699269 699486 . + 0 Parent=GSCOCT00024545001 | |
| 32019 chr10 manual_curation CDS 699666 699799 . + 2 Parent=GSCOCT00024545001 | |
| 32020 chr10 manual_curation CDS 700036 700466 . + 1 Parent=GSCOCT00024545001 | |
| 32021 chr10 manual_curation CDS 700807 700938 . + 0 Parent=GSCOCT00024545001 | |
| 32022 chr10 manual_curation CDS 701083 701571 . + 0 Parent=GSCOCT00024545001 | |
| 32023 chr10 manual_curation gene 701962 704408 . - . ID=GSCOCG00024546001;Name=Cc10_g00860 | |
| 32024 chr10 manual_curation mRNA 701962 704408 . - . ID=GSCOCT00024546001;Parent=GSCOCG00024546001;Name=Cc10_g00860 | |
| 32025 chr10 manual_curation polypeptide 702107 704329 . - . ID=GSCOCP00024546001;Dbxref=TAIR:AT1G20460.1,TAIR:AT1G76185.1,TrEMBL:A9PEN2,TrEMBL:D7KTA7,TrEMBL:Q8L6Z1;Derives_from=GSCOCT00024546001;Name=Cc10_g00860;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024546001~ unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76185.1)%3B Has 37 Blast hits to 37 proteins in 11 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 37%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(704217..704329%2C702107..702314));owner=coffea | |
| 32026 chr10 manual_curation exon 701962 702314 . - . Parent=GSCOCT00024546001 | |
| 32027 chr10 manual_curation exon 704217 704408 . - . Parent=GSCOCT00024546001 | |
| 32028 chr10 manual_curation CDS 702107 702314 . - 2 Parent=GSCOCT00024546001 | |
| 32029 chr10 manual_curation CDS 704217 704329 . - 0 Parent=GSCOCT00024546001 | |
| 32030 chr10 manual_curation gene 710672 712078 . + . ID=GSCOCG00024547001;Name=Cc10_g00870 | |
| 32031 chr10 manual_curation mRNA 710672 712078 . + . ID=GSCOCT00024547001;Parent=GSCOCG00024547001;Name=Cc10_g00870 | |
| 32032 chr10 manual_curation polypeptide 710830 711650 . + . ID=GSCOCP00024547001;Dbxref=InterPro:IPR000167,PFAM:PF00257,PROSITE:PS00315,PROSITE:PS00823,SwissProt:P31168,SwissProt:P42759,SwissProt:Q9XJ56,TAIR:AT1G20440.1,TAIR:AT1G20450.1,TrEMBL:B8Y3W6,TrEMBL:Q1A4H3,TrEMBL:Q9SP21;Derives_from=GSCOCT00024547001;Name=Cc10_g00870;Ontology_term=CC_evidence_code:ISS,GO:0006950,GO:0009415,CC_EC_number:missing_EC_number,PRODUCT:Phosphoprotein ECPP44,CC_functional_completeness:fragment,CC_gene:ECPP44,CC_gene:ERD10,CC_gene:COR47;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024547001~ Phosphoprotein ECPP44~ ECPP44~ fragment;original_location=join(710830..711066%2C711204..711650);owner=coffea | |
| 32033 chr10 manual_curation exon 710672 711066 . + . Parent=GSCOCT00024547001 | |
| 32034 chr10 manual_curation exon 711204 712078 . + . Parent=GSCOCT00024547001 | |
| 32035 chr10 manual_curation CDS 710830 711066 . + 0 Parent=GSCOCT00024547001 | |
| 32036 chr10 manual_curation CDS 711204 711650 . + 0 Parent=GSCOCT00024547001 | |
| 32037 chr10 manual_curation gene 715466 726676 . + . ID=GSCOCG00024548001;Name=Cc10_g00880 | |
| 32038 chr10 manual_curation mRNA 715466 726676 . + . ID=GSCOCT00024548001;Parent=GSCOCG00024548001;Name=Cc10_g00880 | |
| 32039 chr10 manual_curation polypeptide 716822 726058 . + . ID=GSCOCP00024548001;Dbxref=InterPro:IPR000626,InterPro:IPR019954,InterPro:IPR019955,InterPro:IPR019956,PFAM:PF00240,PRINTS:PR00348,PROFILE:PS50053,PROSITE:PS00299,SMART:SM00213,SwissProt:P46379,SwissProt:Q6MG49,SwissProt:Q9Z1R2,TAIR:AT5G25270.1,TAIR:AT5G42220.1,TrEMBL:B9R8J0,TrEMBL:I1MBZ3,TrEMBL:I1MY66;Derives_from=GSCOCT00024548001;Name=Cc10_g00880;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Ubiquitin-like superfamily protein,CC_functional_completeness:complete,CC_gene:Bag6,CC_gene:BAG6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024548001~ Putative Ubiquitin-like superfamily protein~ Bag6~ complete;original_location=join(716822..716950%2C717255..717372%2C718246..718353%2C718442..718563%2C718669..718734%2C720542..720703%2C720792..720861%2C720943..721097%2C721975..722139%2C722215..722286%2C722697..722820%2C722916..723227%2C723375..723523%2C723611..723835%2C724514..725128%2C725737..725892%2C725996..726058);owner=coffea | |
| 32040 chr10 manual_curation exon 715466 716950 . + . Parent=GSCOCT00024548001 | |
| 32041 chr10 manual_curation exon 717255 717372 . + . Parent=GSCOCT00024548001 | |
| 32042 chr10 manual_curation exon 718246 718353 . + . Parent=GSCOCT00024548001 | |
| 32043 chr10 manual_curation exon 718442 718563 . + . Parent=GSCOCT00024548001 | |
| 32044 chr10 manual_curation exon 718669 718734 . + . Parent=GSCOCT00024548001 | |
| 32045 chr10 manual_curation exon 720542 720703 . + . Parent=GSCOCT00024548001 | |
| 32046 chr10 manual_curation exon 720792 720861 . + . Parent=GSCOCT00024548001 | |
| 32047 chr10 manual_curation exon 720943 721097 . + . Parent=GSCOCT00024548001 | |
| 32048 chr10 manual_curation exon 721975 722139 . + . Parent=GSCOCT00024548001 | |
| 32049 chr10 manual_curation exon 722215 722286 . + . Parent=GSCOCT00024548001 | |
| 32050 chr10 manual_curation exon 722697 722820 . + . Parent=GSCOCT00024548001 | |
| 32051 chr10 manual_curation exon 722916 723227 . + . Parent=GSCOCT00024548001 | |
| 32052 chr10 manual_curation exon 723375 723523 . + . Parent=GSCOCT00024548001 | |
| 32053 chr10 manual_curation exon 723611 723835 . + . Parent=GSCOCT00024548001 | |
| 32054 chr10 manual_curation exon 724514 725128 . + . Parent=GSCOCT00024548001 | |
| 32055 chr10 manual_curation exon 725737 725892 . + . Parent=GSCOCT00024548001 | |
| 32056 chr10 manual_curation exon 725996 726676 . + . Parent=GSCOCT00024548001 | |
| 32057 chr10 manual_curation CDS 716822 716950 . + 0 Parent=GSCOCT00024548001 | |
| 32058 chr10 manual_curation CDS 717255 717372 . + 0 Parent=GSCOCT00024548001 | |
| 32059 chr10 manual_curation CDS 718246 718353 . + 1 Parent=GSCOCT00024548001 | |
| 32060 chr10 manual_curation CDS 718442 718563 . + 1 Parent=GSCOCT00024548001 | |
| 32061 chr10 manual_curation CDS 718669 718734 . + 0 Parent=GSCOCT00024548001 | |
| 32062 chr10 manual_curation CDS 720542 720703 . + 0 Parent=GSCOCT00024548001 | |
| 32063 chr10 manual_curation CDS 720792 720861 . + 0 Parent=GSCOCT00024548001 | |
| 32064 chr10 manual_curation CDS 720943 721097 . + 1 Parent=GSCOCT00024548001 | |
| 32065 chr10 manual_curation CDS 721975 722139 . + 0 Parent=GSCOCT00024548001 | |
| 32066 chr10 manual_curation CDS 722215 722286 . + 0 Parent=GSCOCT00024548001 | |
| 32067 chr10 manual_curation CDS 722697 722820 . + 0 Parent=GSCOCT00024548001 | |
| 32068 chr10 manual_curation CDS 722916 723227 . + 1 Parent=GSCOCT00024548001 | |
| 32069 chr10 manual_curation CDS 723375 723523 . + 1 Parent=GSCOCT00024548001 | |
| 32070 chr10 manual_curation CDS 723611 723835 . + 0 Parent=GSCOCT00024548001 | |
| 32071 chr10 manual_curation CDS 724514 725128 . + 0 Parent=GSCOCT00024548001 | |
| 32072 chr10 manual_curation CDS 725737 725892 . + 0 Parent=GSCOCT00024548001 | |
| 32073 chr10 manual_curation CDS 725996 726058 . + 0 Parent=GSCOCT00024548001 | |
| 32074 chr10 manual_curation gene 727843 733567 . + . ID=GSCOCG00024549001;Name=Cc10_g00890 | |
| 32075 chr10 manual_curation mRNA 727843 733567 . + . ID=GSCOCT00024549001;Parent=GSCOCG00024549001;Name=Cc10_g00890 | |
| 32076 chr10 manual_curation polypeptide 727986 733097 . + . ID=GSCOCP00024549001;Dbxref=GENE3D:G3DSA:3.40.50.620,InterPro:IPR000541,InterPro:IPR011063,InterPro:IPR012089,InterPro:IPR014729,PFAM:PF01171,PIR:PIRSF004976,SwissProt:A8JF71,SwissProt:O64862,SwissProt:Q6Z6G6,TAIR:AT1G76170.1,TAIR:AT2G44270.2,TIGRFAMs:TIGR00269,TrEMBL:B9H5A1,TrEMBL:B9R8I9,TrEMBL:E0CQT4;Derives_from=GSCOCT00024549001;Name=Cc10_g00890;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0008033,CC_EC_number:missing_EC_number,PRODUCT:Cytoplasmic tRNA 2-thiolation protein 1,CC_functional_completeness:complete,CC_gene:NCS6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024549001~ Cytoplasmic tRNA 2-thiolation protein 1~ NCS6~ complete;original_location=join(727986..728087%2C728206..728320%2C728952..729094%2C730472..730591%2C731436..731548%2C731673..731760%2C731870..731915%2C732326..732392%2C732460..732571%2C732933..733097);owner=coffea | |
| 32077 chr10 manual_curation exon 727843 728087 . + . Parent=GSCOCT00024549001 | |
| 32078 chr10 manual_curation exon 728206 728320 . + . Parent=GSCOCT00024549001 | |
| 32079 chr10 manual_curation exon 728952 729094 . + . Parent=GSCOCT00024549001 | |
| 32080 chr10 manual_curation exon 730472 730591 . + . Parent=GSCOCT00024549001 | |
| 32081 chr10 manual_curation exon 731436 731548 . + . Parent=GSCOCT00024549001 | |
| 32082 chr10 manual_curation exon 731673 731760 . + . Parent=GSCOCT00024549001 | |
| 32083 chr10 manual_curation exon 731870 731915 . + . Parent=GSCOCT00024549001 | |
| 32084 chr10 manual_curation exon 732326 732392 . + . Parent=GSCOCT00024549001 | |
| 32085 chr10 manual_curation exon 732460 732571 . + . Parent=GSCOCT00024549001 | |
| 32086 chr10 manual_curation exon 732933 733567 . + . Parent=GSCOCT00024549001 | |
| 32087 chr10 manual_curation CDS 727986 728087 . + 0 Parent=GSCOCT00024549001 | |
| 32088 chr10 manual_curation CDS 728206 728320 . + 0 Parent=GSCOCT00024549001 | |
| 32089 chr10 manual_curation CDS 728952 729094 . + 1 Parent=GSCOCT00024549001 | |
| 32090 chr10 manual_curation CDS 730472 730591 . + 0 Parent=GSCOCT00024549001 | |
| 32091 chr10 manual_curation CDS 731436 731548 . + 0 Parent=GSCOCT00024549001 | |
| 32092 chr10 manual_curation CDS 731673 731760 . + 2 Parent=GSCOCT00024549001 | |
| 32093 chr10 manual_curation CDS 731870 731915 . + 0 Parent=GSCOCT00024549001 | |
| 32094 chr10 manual_curation CDS 732326 732392 . + 1 Parent=GSCOCT00024549001 | |
| 32095 chr10 manual_curation CDS 732460 732571 . + 2 Parent=GSCOCT00024549001 | |
| 32096 chr10 manual_curation CDS 732933 733097 . + 0 Parent=GSCOCT00024549001 | |
| 32097 chr10 manual_curation gene 733821 735252 . + . ID=GSCOCG00024550001;Name=Cc10_g00900 | |
| 32098 chr10 manual_curation mRNA 733821 735252 . + . ID=GSCOCT00024550001;Parent=GSCOCG00024550001;Name=Cc10_g00900 | |
| 32099 chr10 manual_curation polypeptide 734041 734361 . + . ID=GSCOCP00024550001;Dbxref=TAIR:AT1G20430.1,TrEMBL:A9PEW8,TrEMBL:B9R8I8,TrEMBL:F6H0C7;Derives_from=GSCOCT00024550001;Name=Cc10_g00900;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B Has 29 Blast hits to 29 proteins in 10 species,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024550001~ unknown protein%3B Has 29 Blast hits to 29 proteins in 10 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 29%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=734041..734361;owner=coffea | |
| 32100 chr10 manual_curation exon 733821 735252 . + . Parent=GSCOCT00024550001 | |
| 32101 chr10 manual_curation CDS 734041 734361 . + 0 Parent=GSCOCT00024550001 | |
| 32102 chr10 manual_curation gene 741384 748316 . + . ID=GSCOCG00024551001;Name=Cc10_g00910 | |
| 32103 chr10 manual_curation mRNA 741384 748316 . + . ID=GSCOCT00024551001;Parent=GSCOCG00024551001;Name=Cc10_g00910 | |
| 32104 chr10 manual_curation polypeptide 742333 747955 . + . ID=GSCOCP00024551001;Dbxref=GENE3D:G3DSA:2.60.40.420,InterPro:IPR001117,InterPro:IPR008972,InterPro:IPR011706,InterPro:IPR011707,PFAM:PF00394,PFAM:PF07731,PFAM:PF07732,SUPERFAMILY:SSF49503,SwissProt:P29162,SwissProt:Q00624,SwissProt:Q9SU40,TAIR:AT1G21850.1,TAIR:AT1G41830.1,TAIR:AT1G76160.1,TrEMBL:B7FLF1,TrEMBL:B9H5E3,TrEMBL:B9R8I7;Derives_from=GSCOCT00024551001;Name=Cc10_g00910;Ontology_term=CC_evidence_code:ISS,GO:0005507,GO:0016491,GO:0055114,CC_EC_number:1.10.3.3,PRODUCT:L-ascorbate oxidase homolog,CC_functional_completeness:complete,CC_gene:Bp10,CC_gene:SKU5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024551001~ L-ascorbate oxidase homolog~ Bp10~ complete;original_location=join(742333..742476%2C742721..742830%2C744968..745238%2C746274..746376%2C746622..746967%2C747048..747413%2C747567..747645%2C747743..747955);owner=coffea | |
| 32105 chr10 manual_curation exon 741384 742476 . + . Parent=GSCOCT00024551001 | |
| 32106 chr10 manual_curation exon 742721 742830 . + . Parent=GSCOCT00024551001 | |
| 32107 chr10 manual_curation exon 744968 745238 . + . Parent=GSCOCT00024551001 | |
| 32108 chr10 manual_curation exon 746274 746376 . + . Parent=GSCOCT00024551001 | |
| 32109 chr10 manual_curation exon 746622 746967 . + . Parent=GSCOCT00024551001 | |
| 32110 chr10 manual_curation exon 747048 747413 . + . Parent=GSCOCT00024551001 | |
| 32111 chr10 manual_curation exon 747567 747645 . + . Parent=GSCOCT00024551001 | |
| 32112 chr10 manual_curation exon 747743 748316 . + . Parent=GSCOCT00024551001 | |
| 32113 chr10 manual_curation CDS 742333 742476 . + 0 Parent=GSCOCT00024551001 | |
| 32114 chr10 manual_curation CDS 742721 742830 . + 0 Parent=GSCOCT00024551001 | |
| 32115 chr10 manual_curation CDS 744968 745238 . + 2 Parent=GSCOCT00024551001 | |
| 32116 chr10 manual_curation CDS 746274 746376 . + 0 Parent=GSCOCT00024551001 | |
| 32117 chr10 manual_curation CDS 746622 746967 . + 1 Parent=GSCOCT00024551001 | |
| 32118 chr10 manual_curation CDS 747048 747413 . + 2 Parent=GSCOCT00024551001 | |
| 32119 chr10 manual_curation CDS 747567 747645 . + 2 Parent=GSCOCT00024551001 | |
| 32120 chr10 manual_curation CDS 747743 747955 . + 0 Parent=GSCOCT00024551001 | |
| 32121 chr10 manual_curation gene 748599 749973 . - . ID=GSCOCG00024552001;Name=Cc10_g00920 | |
| 32122 chr10 manual_curation mRNA 748599 749973 . - . ID=GSCOCT00024552001;Parent=GSCOCG00024552001;Name=Cc10_g00920 | |
| 32123 chr10 manual_curation polypeptide 748599 749813 . - . ID=GSCOCP00024552001;Dbxref=InterPro:IPR005174,PFAM:PF03478,SwissProt:Q3EBZ2,SwissProt:Q6DR20,SwissProt:Q9FLP7,TAIR:AT2G17030.1,TAIR:AT2G17036.1,TAIR:AT5G55150.1,TrEMBL:A5AJY7,TrEMBL:B9GQ57,TrEMBL:B9R8H5;Derives_from=GSCOCT00024552001;Name=Cc10_g00920;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative F-box protein SKIP23,CC_functional_completeness:complete,CC_gene:SKIP23,CC_gene:At2g17036,CC_gene:At5g55150;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024552001~ Putative F-box protein SKIP23~ SKIP23~ complete;original_location=complement(748599..749813);owner=coffea | |
| 32124 chr10 manual_curation exon 748599 749973 . - . Parent=GSCOCT00024552001 | |
| 32125 chr10 manual_curation CDS 748599 749813 . - 0 Parent=GSCOCT00024552001 | |
| 32126 chr10 manual_curation gene 751810 754555 . - . ID=GSCOCG00024553001;Name=Cc10_g00930 | |
| 32127 chr10 manual_curation mRNA 751810 754555 . - . ID=GSCOCT00024553001;Parent=GSCOCG00024553001;Name=Cc10_g00930 | |
| 32128 chr10 manual_curation polypeptide 752267 754176 . - . ID=GSCOCP00024553001;Dbxref=GENE3D:G3DSA:3.30.70.580,GENE3D:G3DSA:3.30.70.660,InterPro:IPR001406,InterPro:IPR020094,InterPro:IPR020095,InterPro:IPR020097,InterPro:IPR020103,PANTHER:PTHR11142,PFAM:PF01416,SUPERFAMILY:SSF55120,SwissProt:O94396,SwissProt:Q59S63,SwissProt:Q6CC39,TAIR:AT1G20370.1,TAIR:AT1G76120.1,TAIR:AT2G30320.1,TrEMBL:B9GQ56,TrEMBL:B9H5D6,TrEMBL:E5GCD2;Derives_from=GSCOCT00024553001;Name=Cc10_g00930;Ontology_term=CC_evidence_code:ISS,GO:0001522,GO:0003723,GO:0009451,GO:0009982,CC_EC_number:5.4.99.12,PRODUCT:Putative tRNA pseudouridine synthase 1,CC_functional_completeness:fragment,CC_gene:PUS1,CC_gene:pus1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024553001~ Putative tRNA pseudouridine synthase 1~ PUS1~ fragment;original_location=complement(join(753610..754176%2C753170..753558%2C752774..753079%2C752267..752276));owner=coffea | |
| 32129 chr10 manual_curation exon 751810 752276 . - . Parent=GSCOCT00024553001 | |
| 32130 chr10 manual_curation exon 752774 753079 . - . Parent=GSCOCT00024553001 | |
| 32131 chr10 manual_curation exon 753170 753558 . - . Parent=GSCOCT00024553001 | |
| 32132 chr10 manual_curation exon 753610 754555 . - . Parent=GSCOCT00024553001 | |
| 32133 chr10 manual_curation CDS 752267 752276 . - 2 Parent=GSCOCT00024553001 | |
| 32134 chr10 manual_curation CDS 752774 753079 . - 2 Parent=GSCOCT00024553001 | |
| 32135 chr10 manual_curation CDS 753170 753558 . - 0 Parent=GSCOCT00024553001 | |
| 32136 chr10 manual_curation CDS 753610 754176 . - 0 Parent=GSCOCT00024553001 | |
| 32137 chr10 manual_curation gene 770280 774978 . - . ID=GSCOCG00024555001;Name=Cc10_g00940 | |
| 32138 chr10 manual_curation mRNA 770280 774978 . - . ID=GSCOCT00024555001;Parent=GSCOCG00024555001;Name=Cc10_g00940 | |
| 32139 chr10 manual_curation polypeptide 770822 774809 . - . ID=GSCOCP00024555001;Dbxref=InterPro:IPR005512,PFAM:PF03759,PROFILE:PS51334,SwissProt:Q93ZY2,SwissProt:Q9LQ89,SwissProt:Q9LV40,TAIR:AT4G38430.1,TAIR:AT5G02010.1,TAIR:AT5G05940.1,TrEMBL:A5AJZ2,TrEMBL:B9HR10,TrEMBL:D7U4U0;Derives_from=GSCOCT00024555001;Name=Cc10_g00940;Ontology_term=CC_evidence_code:ISS,GO:0005089,CC_EC_number:missing_EC_number,PRODUCT:Rop guanine nucleotide exchange factor 1,CC_functional_completeness:complete,CC_gene:ROPGEF1,CC_gene:ROPGEF8,CC_gene:ROPGEF2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024555001~ Rop guanine nucleotide exchange factor 1~ ROPGEF1~ complete;original_location=complement(join(774485..774809%2C773456..773572%2C772782..773320%2C771788..772138%2C770822..771166));owner=coffea | |
| 32140 chr10 manual_curation exon 770280 771166 . - . Parent=GSCOCT00024555001 | |
| 32141 chr10 manual_curation exon 771788 772138 . - . Parent=GSCOCT00024555001 | |
| 32142 chr10 manual_curation exon 772782 773320 . - . Parent=GSCOCT00024555001 | |
| 32143 chr10 manual_curation exon 773456 773572 . - . Parent=GSCOCT00024555001 | |
| 32144 chr10 manual_curation exon 774485 774978 . - . Parent=GSCOCT00024555001 | |
| 32145 chr10 manual_curation CDS 770822 771166 . - 0 Parent=GSCOCT00024555001 | |
| 32146 chr10 manual_curation CDS 771788 772138 . - 0 Parent=GSCOCT00024555001 | |
| 32147 chr10 manual_curation CDS 772782 773320 . - 1 Parent=GSCOCT00024555001 | |
| 32148 chr10 manual_curation CDS 773456 773572 . - 1 Parent=GSCOCT00024555001 | |
| 32149 chr10 manual_curation CDS 774485 774809 . - 0 Parent=GSCOCT00024555001 | |
| 32150 chr10 manual_curation gene 780370 786326 . + . ID=GSCOCG00024556001;Name=Cc10_g00950 | |
| 32151 chr10 manual_curation mRNA 780370 786326 . + . ID=GSCOCT00024556001;Parent=GSCOCG00024556001;Name=Cc10_g00950 | |
| 32152 chr10 manual_curation polypeptide 780806 785423 . + . ID=GSCOCP00024556001;Dbxref=InterPro:IPR001375,InterPro:IPR002470,InterPro:IPR004106,PANTHER:PTHR11757,PFAM:PF00326,PFAM:PF02897,PRINTS:PR00862,SUPERFAMILY:SSF50993,SwissProt:O70196,SwissProt:P48147,SwissProt:Q9QUR6,TAIR:AT1G20380.1,TAIR:AT1G50380.1,TAIR:AT1G76140.1,TrEMBL:E0CQU0,TrEMBL:H2D7F0,TrEMBL:H2D7F1;Derives_from=GSCOCT00024556001;Name=Cc10_g00950;Ontology_term=CC_evidence_code:ISS,GO:0004252,GO:0006508,GO:0008236,CC_EC_number:3.4.21.26,PRODUCT:Prolyl endopeptidase,CC_functional_completeness:complete,CC_gene:Prep,CC_gene:PREP;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024556001~ Prolyl endopeptidase~ Prep~ complete;original_location=join(780806..780915%2C781043..781262%2C781507..781707%2C781797..781867%2C782169..782331%2C782496..783089%2C783699..784079%2C784194..784269%2C784369..784432%2C784885..785020%2C785158..785271%2C785358..785423);owner=coffea | |
| 32153 chr10 manual_curation exon 780370 780915 . + . Parent=GSCOCT00024556001 | |
| 32154 chr10 manual_curation exon 781043 781262 . + . Parent=GSCOCT00024556001 | |
| 32155 chr10 manual_curation exon 781507 781707 . + . Parent=GSCOCT00024556001 | |
| 32156 chr10 manual_curation exon 781797 781867 . + . Parent=GSCOCT00024556001 | |
| 32157 chr10 manual_curation exon 782169 782331 . + . Parent=GSCOCT00024556001 | |
| 32158 chr10 manual_curation exon 782496 783089 . + . Parent=GSCOCT00024556001 | |
| 32159 chr10 manual_curation exon 783699 784079 . + . Parent=GSCOCT00024556001 | |
| 32160 chr10 manual_curation exon 784194 784269 . + . Parent=GSCOCT00024556001 | |
| 32161 chr10 manual_curation exon 784369 784432 . + . Parent=GSCOCT00024556001 | |
| 32162 chr10 manual_curation exon 784885 785020 . + . Parent=GSCOCT00024556001 | |
| 32163 chr10 manual_curation exon 785158 785271 . + . Parent=GSCOCT00024556001 | |
| 32164 chr10 manual_curation exon 785358 786326 . + . Parent=GSCOCT00024556001 | |
| 32165 chr10 manual_curation CDS 780806 780915 . + 0 Parent=GSCOCT00024556001 | |
| 32166 chr10 manual_curation CDS 781043 781262 . + 2 Parent=GSCOCT00024556001 | |
| 32167 chr10 manual_curation CDS 781507 781707 . + 0 Parent=GSCOCT00024556001 | |
| 32168 chr10 manual_curation CDS 781797 781867 . + 0 Parent=GSCOCT00024556001 | |
| 32169 chr10 manual_curation CDS 782169 782331 . + 2 Parent=GSCOCT00024556001 | |
| 32170 chr10 manual_curation CDS 782496 783089 . + 0 Parent=GSCOCT00024556001 | |
| 32171 chr10 manual_curation CDS 783699 784079 . + 0 Parent=GSCOCT00024556001 | |
| 32172 chr10 manual_curation CDS 784194 784269 . + 0 Parent=GSCOCT00024556001 | |
| 32173 chr10 manual_curation CDS 784369 784432 . + 1 Parent=GSCOCT00024556001 | |
| 32174 chr10 manual_curation CDS 784885 785020 . + 2 Parent=GSCOCT00024556001 | |
| 32175 chr10 manual_curation CDS 785158 785271 . + 0 Parent=GSCOCT00024556001 | |
| 32176 chr10 manual_curation CDS 785358 785423 . + 0 Parent=GSCOCT00024556001 | |
| 32177 chr10 manual_curation gene 790264 790488 . - . ID=GSCOCG00024558001;Name=Cc10_g00960 | |
| 32178 chr10 manual_curation mRNA 790264 790488 . - . ID=GSCOCT00024558001;Parent=GSCOCG00024558001;Name=Cc10_g00960 | |
| 32179 chr10 manual_curation polypeptide 790264 790488 . - . ID=GSCOCP00024558001;Dbxref=InterPro:IPR012951,PFAM:PF08031,SwissProt:P30986,SwissProt:P93479,SwissProt:Q9SVG4,TAIR:AT1G01980.1,TAIR:AT4G20860.1,TAIR:AT5G44360.1,TrEMBL:B9GGI2,TrEMBL:F6H527,TrEMBL:G7J0C2;Derives_from=GSCOCT00024558001;Name=Cc10_g00960;Ontology_term=CC_evidence_code:ISS,GO:0016491,GO:0050660,CC_EC_number:1.21.3.3,PRODUCT:Reticuline oxidase-like protein,CC_functional_completeness:fragment,CC_gene:At4g20830,CC_gene:BBE1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024558001~ Reticuline oxidase-like protein~ At4g20830~ fragment;original_location=complement(790264..790488);owner=coffea | |
| 32180 chr10 manual_curation exon 790264 790488 . - . Parent=GSCOCT00024558001 | |
| 32181 chr10 manual_curation CDS 790264 790488 . - 0 Parent=GSCOCT00024558001 | |
| 32182 chr10 manual_curation gene 790624 791475 . - . ID=GSCOCG00024559001;Name=Cc10_g00970 | |
| 32183 chr10 manual_curation mRNA 790624 791475 . - . ID=GSCOCT00024559001;Parent=GSCOCG00024559001;Name=Cc10_g00970 | |
| 32184 chr10 manual_curation polypeptide 790624 791475 . - . ID=GSCOCP00024559001;Dbxref=InterPro:IPR006094,InterPro:IPR016166,PFAM:PF01565,PROFILE:PS51387,SUPERFAMILY:SSF56176,SwissProt:P30986,SwissProt:P93479,SwissProt:Q9SVG4,TAIR:AT2G34790.1,TAIR:AT4G20820.1,TAIR:AT5G44440.1,TrEMBL:B9NA97,TrEMBL:B9NCN5,TrEMBL:B9SAZ2;Derives_from=GSCOCT00024559001;Name=Cc10_g00970;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0016491,GO:0050660,CC_EC_number:1.21.3.3,PRODUCT:Putative Reticuline oxidase-like protein,CC_functional_completeness:fragment,CC_gene:At4g20830,CC_gene:BBE1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024559001~ Putative Reticuline oxidase-like protein~ At4g20830~ fragment;original_location=complement(790624..791475);owner=coffea | |
| 32185 chr10 manual_curation exon 790624 791475 . - . Parent=GSCOCT00024559001 | |
| 32186 chr10 manual_curation CDS 790624 791475 . - 0 Parent=GSCOCT00024559001 | |
| 32187 chr10 manual_curation gene 794059 801170 . - . ID=GSCOCG00024561001;Name=Cc10_g00980 | |
| 32188 chr10 manual_curation mRNA 794059 801170 . - . ID=GSCOCT00024561001;Parent=GSCOCG00024561001;Name=Cc10_g00980 | |
| 32189 chr10 manual_curation polypeptide 795467 800717 . - . ID=GSCOCP00024561001;Dbxref=SwissProt:Q3MIT2,SwissProt:Q6ING2,SwissProt:Q9D3U0,TAIR:AT1G20410.1,TrEMBL:B9H5E1,TrEMBL:B9R8I1,TrEMBL:F6H0C9;Derives_from=GSCOCT00024561001;Name=Cc10_g00980;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative tRNA pseudouridine synthase Pus10,CC_functional_completeness:complete,CC_gene:PUS10,CC_gene:Pus10,CC_gene:pus10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024561001~ Putative tRNA pseudouridine synthase Pus10~ PUS10~ complete;original_location=complement(join(800553..800717%2C799807..800204%2C799406..799526%2C798969..799083%2C798091..798245%2C797831..797902%2C797627..797695%2C797463..797543%2C797265..797384%2C797099..797173%2C796926..797006%2C796386..796459%2C796234..796294%2C795710..795765%2C795467..795542));owner=coffea | |
| 32190 chr10 manual_curation exon 794059 795542 . - . Parent=GSCOCT00024561001 | |
| 32191 chr10 manual_curation exon 795710 795765 . - . Parent=GSCOCT00024561001 | |
| 32192 chr10 manual_curation exon 796234 796294 . - . Parent=GSCOCT00024561001 | |
| 32193 chr10 manual_curation exon 796386 796459 . - . Parent=GSCOCT00024561001 | |
| 32194 chr10 manual_curation exon 796926 797006 . - . Parent=GSCOCT00024561001 | |
| 32195 chr10 manual_curation exon 797099 797173 . - . Parent=GSCOCT00024561001 | |
| 32196 chr10 manual_curation exon 797265 797384 . - . Parent=GSCOCT00024561001 | |
| 32197 chr10 manual_curation exon 797463 797543 . - . Parent=GSCOCT00024561001 | |
| 32198 chr10 manual_curation exon 797627 797695 . - . Parent=GSCOCT00024561001 | |
| 32199 chr10 manual_curation exon 797831 797902 . - . Parent=GSCOCT00024561001 | |
| 32200 chr10 manual_curation exon 798091 798245 . - . Parent=GSCOCT00024561001 | |
| 32201 chr10 manual_curation exon 798969 799083 . - . Parent=GSCOCT00024561001 | |
| 32202 chr10 manual_curation exon 799406 799526 . - . Parent=GSCOCT00024561001 | |
| 32203 chr10 manual_curation exon 799807 800204 . - . Parent=GSCOCT00024561001 | |
| 32204 chr10 manual_curation exon 800553 801170 . - . Parent=GSCOCT00024561001 | |
| 32205 chr10 manual_curation CDS 795467 795542 . - 2 Parent=GSCOCT00024561001 | |
| 32206 chr10 manual_curation CDS 795710 795765 . - 0 Parent=GSCOCT00024561001 | |
| 32207 chr10 manual_curation CDS 796234 796294 . - 2 Parent=GSCOCT00024561001 | |
| 32208 chr10 manual_curation CDS 796386 796459 . - 0 Parent=GSCOCT00024561001 | |
| 32209 chr10 manual_curation CDS 796926 797006 . - 0 Parent=GSCOCT00024561001 | |
| 32210 chr10 manual_curation CDS 797099 797173 . - 0 Parent=GSCOCT00024561001 | |
| 32211 chr10 manual_curation CDS 797265 797384 . - 0 Parent=GSCOCT00024561001 | |
| 32212 chr10 manual_curation CDS 797463 797543 . - 0 Parent=GSCOCT00024561001 | |
| 32213 chr10 manual_curation CDS 797627 797695 . - 0 Parent=GSCOCT00024561001 | |
| 32214 chr10 manual_curation CDS 797831 797902 . - 0 Parent=GSCOCT00024561001 | |
| 32215 chr10 manual_curation CDS 798091 798245 . - 1 Parent=GSCOCT00024561001 | |
| 32216 chr10 manual_curation CDS 798969 799083 . - 0 Parent=GSCOCT00024561001 | |
| 32217 chr10 manual_curation CDS 799406 799526 . - 2 Parent=GSCOCT00024561001 | |
| 32218 chr10 manual_curation CDS 799807 800204 . - 0 Parent=GSCOCT00024561001 | |
| 32219 chr10 manual_curation CDS 800553 800717 . - 0 Parent=GSCOCT00024561001 | |
| 32220 chr10 manual_curation gene 801226 806636 . - . ID=GSCOCG00024562001;Name=Cc10_g00990 | |
| 32221 chr10 manual_curation mRNA 801226 806636 . - . ID=GSCOCT00024562001;Parent=GSCOCG00024562001;Name=Cc10_g00990 | |
| 32222 chr10 manual_curation polypeptide 801664 806517 . - . ID=GSCOCP00024562001;Dbxref=InterPro:IPR002539,PFAM:PF01575,SwissProt:P51659,SwissProt:P51660,SwissProt:Q8VYI3,TAIR:AT1G76150.1,TrEMBL:B9H5E2,TrEMBL:B9R8I2,TrEMBL:E0CQT8;Derives_from=GSCOCT00024562001;Name=Cc10_g00990;Ontology_term=CC_evidence_code:ISS,GO:0008152,GO:0016491,CC_EC_number:4.2.1.107,PRODUCT:Enoyl-CoA hydratase 2%2C peroxisomal,CC_functional_completeness:complete,CC_gene:ECH2,CC_gene:HSD17B4,CC_gene:Hsd17b4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024562001~ Enoyl-CoA hydratase 2%2C peroxisomal~ ECH2~ complete;original_location=complement(join(806446..806517%2C806136..806270%2C805826..805896%2C805520..805592%2C804779..804818%2C804227..804299%2C803990..804155%2C802680..802750%2C801941..802114%2C801664..801751));owner=coffea | |
| 32223 chr10 manual_curation exon 801226 801751 . - . Parent=GSCOCT00024562001 | |
| 32224 chr10 manual_curation exon 801941 802114 . - . Parent=GSCOCT00024562001 | |
| 32225 chr10 manual_curation exon 802680 802750 . - . Parent=GSCOCT00024562001 | |
| 32226 chr10 manual_curation exon 803990 804155 . - . Parent=GSCOCT00024562001 | |
| 32227 chr10 manual_curation exon 804227 804299 . - . Parent=GSCOCT00024562001 | |
| 32228 chr10 manual_curation exon 804779 804818 . - . Parent=GSCOCT00024562001 | |
| 32229 chr10 manual_curation exon 805520 805592 . - . Parent=GSCOCT00024562001 | |
| 32230 chr10 manual_curation exon 805826 805896 . - . Parent=GSCOCT00024562001 | |
| 32231 chr10 manual_curation exon 806136 806270 . - . Parent=GSCOCT00024562001 | |
| 32232 chr10 manual_curation exon 806446 806636 . - . Parent=GSCOCT00024562001 | |
| 32233 chr10 manual_curation CDS 801664 801751 . - 2 Parent=GSCOCT00024562001 | |
| 32234 chr10 manual_curation CDS 801941 802114 . - 2 Parent=GSCOCT00024562001 | |
| 32235 chr10 manual_curation CDS 802680 802750 . - 0 Parent=GSCOCT00024562001 | |
| 32236 chr10 manual_curation CDS 803990 804155 . - 2 Parent=GSCOCT00024562001 | |
| 32237 chr10 manual_curation CDS 804227 804299 . - 1 Parent=GSCOCT00024562001 | |
| 32238 chr10 manual_curation CDS 804779 804818 . - 0 Parent=GSCOCT00024562001 | |
| 32239 chr10 manual_curation CDS 805520 805592 . - 2 Parent=GSCOCT00024562001 | |
| 32240 chr10 manual_curation CDS 805826 805896 . - 0 Parent=GSCOCT00024562001 | |
| 32241 chr10 manual_curation CDS 806136 806270 . - 0 Parent=GSCOCT00024562001 | |
| 32242 chr10 manual_curation CDS 806446 806517 . - 0 Parent=GSCOCT00024562001 | |
| 32243 chr10 manual_curation gene 808124 808318 . - . ID=GSCOCG00024563001;Name=Cc10_g01000 | |
| 32244 chr10 manual_curation mRNA 808124 808318 . - . ID=GSCOCT00024563001;Parent=GSCOCG00024563001;Name=Cc10_g01000 | |
| 32245 chr10 manual_curation polypeptide 808124 808318 . - . ID=GSCOCP00024563001;Derives_from=GSCOCT00024563001;Name=Cc10_g01000;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024563001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(808124..808318);owner=coffea | |
| 32246 chr10 manual_curation exon 808124 808318 . - . Parent=GSCOCT00024563001 | |
| 32247 chr10 manual_curation CDS 808124 808318 . - 0 Parent=GSCOCT00024563001 | |
| 32248 chr10 manual_curation gene 812450 815629 . + . ID=GSCOCG00024564001;Name=Cc10_g01010 | |
| 32249 chr10 manual_curation mRNA 812450 815629 . + . ID=GSCOCT00024564001;Parent=GSCOCG00024564001;Name=Cc10_g01010 | |
| 32250 chr10 manual_curation polypeptide 812572 815629 . + . ID=GSCOCP00024564001;Dbxref=GENE3D:G3DSA:1.10.150.60,GENE3D:G3DSA:1.10.30.10,InterPro:IPR000910,InterPro:IPR001606,InterPro:IPR009071,PFAM:PF00505,PFAM:PF01388,PROFILE:PS50118,PROFILE:PS51011,SMART:SM00398,SMART:SM00501,SUPERFAMILY:SSF46774,SUPERFAMILY:SSF47095,SwissProt:Q9LTT3,SwissProt:Q9MAT6,SwissProt:Q9SGS2,TAIR:AT1G04880.1,TAIR:AT1G76110.1,TAIR:AT3G13350.1,TrEMBL:B9R8H2,TrEMBL:D7KT98,TrEMBL:I1JSY3;Derives_from=GSCOCT00024564001;Name=Cc10_g01010;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0005622,GO:0005634,CC_EC_number:missing_EC_number,PRODUCT:High mobility group B protein 9,CC_functional_completeness:complete,CC_gene:HMGB9,CC_gene:HMGB15,CC_gene:HMGB10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024564001~ High mobility group B protein 9~ HMGB9~ complete;original_location=join(812572..812732%2C812971..813049%2C813200..813362%2C813926..813976%2C814807..815225%2C815537..815629);owner=coffea | |
| 32251 chr10 manual_curation exon 812450 812732 . + . Parent=GSCOCT00024564001 | |
| 32252 chr10 manual_curation exon 812971 813049 . + . Parent=GSCOCT00024564001 | |
| 32253 chr10 manual_curation exon 813200 813362 . + . Parent=GSCOCT00024564001 | |
| 32254 chr10 manual_curation exon 813926 813976 . + . Parent=GSCOCT00024564001 | |
| 32255 chr10 manual_curation exon 814807 815225 . + . Parent=GSCOCT00024564001 | |
| 32256 chr10 manual_curation exon 815537 815629 . + . Parent=GSCOCT00024564001 | |
| 32257 chr10 manual_curation CDS 812572 812732 . + 0 Parent=GSCOCT00024564001 | |
| 32258 chr10 manual_curation CDS 812971 813049 . + 2 Parent=GSCOCT00024564001 | |
| 32259 chr10 manual_curation CDS 813200 813362 . + 0 Parent=GSCOCT00024564001 | |
| 32260 chr10 manual_curation CDS 813926 813976 . + 1 Parent=GSCOCT00024564001 | |
| 32261 chr10 manual_curation CDS 814807 815225 . + 1 Parent=GSCOCT00024564001 | |
| 32262 chr10 manual_curation CDS 815537 815629 . + 0 Parent=GSCOCT00024564001 | |
| 32263 chr10 manual_curation gene 816371 818059 . - . ID=GSCOCG00024565001;Name=Cc10_g01020 | |
| 32264 chr10 manual_curation mRNA 816371 818059 . - . ID=GSCOCT00024565001;Parent=GSCOCG00024565001;Name=Cc10_g01020 | |
| 32265 chr10 manual_curation polypeptide 816739 817938 . - . ID=GSCOCP00024565001;Dbxref=InterPro:IPR019955,PROFILE:PS50053,SwissProt:Q3ZBQ4,SwissProt:Q8VIK1,SwissProt:Q9BV90,TAIR:AT3G07860.1,TAIR:AT4G32270.1,TAIR:AT5G25340.1,TrEMBL:B9GQ62,TrEMBL:E0CQU9,TrEMBL:E5GCC9;Derives_from=GSCOCT00024565001;Name=Cc10_g01020;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative U11/U12 small nuclear ribonucleoprotein 25 kDa protein,CC_functional_completeness:modules,CC_gene:SNRNP25,CC_gene:Snrnp25;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024565001~ Putative U11/U12 small nuclear ribonucleoprotein 25 kDa protein~ SNRNP25~ modules;original_location=complement(join(817692..817938%2C817455..817560%2C817223..817322%2C816739..816858));owner=coffea | |
| 32266 chr10 manual_curation exon 816371 816858 . - . Parent=GSCOCT00024565001 | |
| 32267 chr10 manual_curation exon 817223 817322 . - . Parent=GSCOCT00024565001 | |
| 32268 chr10 manual_curation exon 817455 817560 . - . Parent=GSCOCT00024565001 | |
| 32269 chr10 manual_curation exon 817692 818059 . - . Parent=GSCOCT00024565001 | |
| 32270 chr10 manual_curation CDS 816739 816858 . - 0 Parent=GSCOCT00024565001 | |
| 32271 chr10 manual_curation CDS 817223 817322 . - 2 Parent=GSCOCT00024565001 | |
| 32272 chr10 manual_curation CDS 817455 817560 . - 1 Parent=GSCOCT00024565001 | |
| 32273 chr10 manual_curation CDS 817692 817938 . - 0 Parent=GSCOCT00024565001 | |
| 32274 chr10 manual_curation gene 818425 821047 . - . ID=GSCOCG00024566001;Name=Cc10_g01030 | |
| 32275 chr10 manual_curation mRNA 818425 821047 . - . ID=GSCOCT00024566001;Parent=GSCOCG00024566001;Name=Cc10_g01030 | |
| 32276 chr10 manual_curation polypeptide 818713 821047 . - . ID=GSCOCP00024566001;Dbxref=InterPro:IPR006685,InterPro:IPR010920,PFAM:PF00924,SUPERFAMILY:SSF50182,SwissProt:F4IME2,SwissProt:Q9LPG3,SwissProt:Q9SYM1,TAIR:AT1G53470.1,TAIR:AT1G78610.1,TAIR:AT3G14810.1,TrEMBL:C5Y1C6,TrEMBL:I1ICG3,TrEMBL:I1NF72;Derives_from=GSCOCT00024566001;Name=Cc10_g01030;Ontology_term=CC_evidence_code:ISS,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Putative Mechanosensitive ion channel protein 8,CC_functional_completeness:fragment,CC_gene:MSL8,CC_gene:MSL6,CC_gene:MSL4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024566001~ Putative Mechanosensitive ion channel protein 8~ MSL8~ fragment;original_location=complement(join(820035..821047%2C819774..819897%2C819369..819662%2C819089..819291%2C818713..819013));owner=coffea | |
| 32277 chr10 manual_curation exon 818425 819013 . - . Parent=GSCOCT00024566001 | |
| 32278 chr10 manual_curation exon 819089 819291 . - . Parent=GSCOCT00024566001 | |
| 32279 chr10 manual_curation exon 819369 819662 . - . Parent=GSCOCT00024566001 | |
| 32280 chr10 manual_curation exon 819774 819897 . - . Parent=GSCOCT00024566001 | |
| 32281 chr10 manual_curation exon 820035 821047 . - . Parent=GSCOCT00024566001 | |
| 32282 chr10 manual_curation CDS 818713 819013 . - 2 Parent=GSCOCT00024566001 | |
| 32283 chr10 manual_curation CDS 819089 819291 . - 0 Parent=GSCOCT00024566001 | |
| 32284 chr10 manual_curation CDS 819369 819662 . - 0 Parent=GSCOCT00024566001 | |
| 32285 chr10 manual_curation CDS 819774 819897 . - 2 Parent=GSCOCT00024566001 | |
| 32286 chr10 manual_curation CDS 820035 821047 . - 0 Parent=GSCOCT00024566001 | |
| 32287 chr10 manual_curation gene 822062 824314 . - . ID=GSCOCG00024568001;Name=Cc10_g01040 | |
| 32288 chr10 manual_curation mRNA 822062 824314 . - . ID=GSCOCT00024568001;Parent=GSCOCG00024568001;Name=Cc10_g01040 | |
| 32289 chr10 manual_curation polypeptide 823217 824234 . - . ID=GSCOCP00024568001;Dbxref=GENE3D:G3DSA:1.20.1050.10,GENE3D:G3DSA:3.40.30.10,InterPro:IPR004045,InterPro:IPR004046,InterPro:IPR010987,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR017933,PFAM:PF00043,PFAM:PF02798,PROFILE:PS50404,PROFILE:PS50405,SUPERFAMILY:SSF47616,SUPERFAMILY:SSF52833,SwissProt:P30109,SwissProt:P46440,SwissProt:Q96266,TAIR:AT2G30860.1,TAIR:AT2G47730.1,TAIR:AT3G03190.1,TrEMBL:A5AJY2,TrEMBL:B9GQ64,TrEMBL:B9R8H1;Derives_from=GSCOCT00024568001;Name=Cc10_g01040;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.5.1.18,PRODUCT:Putative Glutathione S-transferase F8%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:GSTF8,CC_gene:PARB,CC_gene:APIC;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024568001~ Putative Glutathione S-transferase F8%2C chloroplastic~ GSTF8~ fragment;original_location=complement(join(824058..824234%2C823802..823850%2C823217..823677));owner=coffea | |
| 32290 chr10 manual_curation exon 822062 823677 . - . Parent=GSCOCT00024568001 | |
| 32291 chr10 manual_curation exon 823802 823850 . - . Parent=GSCOCT00024568001 | |
| 32292 chr10 manual_curation exon 824058 824314 . - . Parent=GSCOCT00024568001 | |
| 32293 chr10 manual_curation CDS 823217 823677 . - 1 Parent=GSCOCT00024568001 | |
| 32294 chr10 manual_curation CDS 823802 823850 . - 0 Parent=GSCOCT00024568001 | |
| 32295 chr10 manual_curation CDS 824058 824234 . - 0 Parent=GSCOCT00024568001 | |
| 32296 chr10 manual_curation gene 825272 830171 . - . ID=GSCOCG00024569001;Name=Cc10_g01050 | |
| 32297 chr10 manual_curation mRNA 825272 830171 . - . ID=GSCOCT00024569001;Parent=GSCOCG00024569001;Name=Cc10_g01050 | |
| 32298 chr10 manual_curation polypeptide 825597 829771 . - . ID=GSCOCP00024569001;Dbxref=InterPro:IPR006685,InterPro:IPR010920,InterPro:IPR016688,PFAM:PF00924,PIR:PIRSF017209,SUPERFAMILY:SSF50182,SwissProt:F4IME2,SwissProt:Q9LH74,SwissProt:Q9SYM1,TAIR:AT1G53470.1,TAIR:AT1G78610.1,TAIR:AT3G14810.1,TrEMBL:C5Y1C6,TrEMBL:G7IDC2,TrEMBL:I1NF72;Derives_from=GSCOCT00024569001;Name=Cc10_g01050;Ontology_term=CC_evidence_code:ISS,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Mechanosensitive ion channel protein 8,CC_functional_completeness:complete,CC_gene:MSL8,CC_gene:MSL6,CC_gene:MSL5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024569001~ Mechanosensitive ion channel protein 8~ MSL8~ complete;original_location=complement(join(828000..829771%2C827365..827488%2C826590..826883%2C826204..826406%2C825597..825885));owner=coffea | |
| 32299 chr10 manual_curation exon 825272 825885 . - . Parent=GSCOCT00024569001 | |
| 32300 chr10 manual_curation exon 826204 826406 . - . Parent=GSCOCT00024569001 | |
| 32301 chr10 manual_curation exon 826590 826883 . - . Parent=GSCOCT00024569001 | |
| 32302 chr10 manual_curation exon 827365 827488 . - . Parent=GSCOCT00024569001 | |
| 32303 chr10 manual_curation exon 828000 830171 . - . Parent=GSCOCT00024569001 | |
| 32304 chr10 manual_curation CDS 825597 825885 . - 2 Parent=GSCOCT00024569001 | |
| 32305 chr10 manual_curation CDS 826204 826406 . - 0 Parent=GSCOCT00024569001 | |
| 32306 chr10 manual_curation CDS 826590 826883 . - 0 Parent=GSCOCT00024569001 | |
| 32307 chr10 manual_curation CDS 827365 827488 . - 2 Parent=GSCOCT00024569001 | |
| 32308 chr10 manual_curation CDS 828000 829771 . - 0 Parent=GSCOCT00024569001 | |
| 32309 chr10 manual_curation gene 831891 839236 . - . ID=GSCOCG00024570001;Name=Cc10_g01060 | |
| 32310 chr10 manual_curation mRNA 831891 839236 . - . ID=GSCOCT00024570001;Parent=GSCOCG00024570001;Name=Cc10_g01060 | |
| 32311 chr10 manual_curation polypeptide 832586 839236 . - . ID=GSCOCP00024570001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR002912,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR015783,InterPro:IPR020635,PANTHER:PTHR23257:SF82,PFAM:PF01842,PFAM:PF07714,PRINTS:PR00109,PROFILE:PS50011,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q2MHE4,SwissProt:Q54H46,SwissProt:Q55GU0,TAIR:AT2G17700.1,TAIR:AT4G35780.1,TAIR:AT4G38470.1,TrEMBL:D7U4Z3,TrEMBL:G7IDD3,TrEMBL:G7JYS9;Derives_from=GSCOCT00024570001;Name=Cc10_g01060;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,GO:0008152,GO:0016597,CC_EC_number:2.7.10.2,PRODUCT:ACT-like protein tyrosine kinase family protein,CC_functional_completeness:complete,CC_gene:HT1,CC_gene:DDB_G0267514,CC_gene:drkA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024570001~ ACT-like protein tyrosine kinase family protein~ HT1~ complete;original_location=complement(join(839049..839236%2C838252..838366%2C837606..837691%2C837412..837528%2C837214..837268%2C836985..837095%2C835999..836049%2C835755..835930%2C835569..835676%2C834586..834659%2C834226..834401%2C833798..833893%2C833411..833491%2C833188..833241%2C832730..832864%2C832586..832660));owner=coffea | |
| 32312 chr10 manual_curation exon 831891 832660 . - . Parent=GSCOCT00024570001 | |
| 32313 chr10 manual_curation exon 832730 832864 . - . Parent=GSCOCT00024570001 | |
| 32314 chr10 manual_curation exon 833188 833241 . - . Parent=GSCOCT00024570001 | |
| 32315 chr10 manual_curation exon 833411 833491 . - . Parent=GSCOCT00024570001 | |
| 32316 chr10 manual_curation exon 833798 833893 . - . Parent=GSCOCT00024570001 | |
| 32317 chr10 manual_curation exon 834226 834401 . - . Parent=GSCOCT00024570001 | |
| 32318 chr10 manual_curation exon 834586 834659 . - . Parent=GSCOCT00024570001 | |
| 32319 chr10 manual_curation exon 835569 835676 . - . Parent=GSCOCT00024570001 | |
| 32320 chr10 manual_curation exon 835755 835930 . - . Parent=GSCOCT00024570001 | |
| 32321 chr10 manual_curation exon 835999 836049 . - . Parent=GSCOCT00024570001 | |
| 32322 chr10 manual_curation exon 836985 837095 . - . Parent=GSCOCT00024570001 | |
| 32323 chr10 manual_curation exon 837214 837268 . - . Parent=GSCOCT00024570001 | |
| 32324 chr10 manual_curation exon 837412 837528 . - . Parent=GSCOCT00024570001 | |
| 32325 chr10 manual_curation exon 837606 837691 . - . Parent=GSCOCT00024570001 | |
| 32326 chr10 manual_curation exon 838252 838366 . - . Parent=GSCOCT00024570001 | |
| 32327 chr10 manual_curation exon 839049 839236 . - . Parent=GSCOCT00024570001 | |
| 32328 chr10 manual_curation CDS 832586 832660 . - 0 Parent=GSCOCT00024570001 | |
| 32329 chr10 manual_curation CDS 832730 832864 . - 0 Parent=GSCOCT00024570001 | |
| 32330 chr10 manual_curation CDS 833188 833241 . - 0 Parent=GSCOCT00024570001 | |
| 32331 chr10 manual_curation CDS 833411 833491 . - 0 Parent=GSCOCT00024570001 | |
| 32332 chr10 manual_curation CDS 833798 833893 . - 0 Parent=GSCOCT00024570001 | |
| 32333 chr10 manual_curation CDS 834226 834401 . - 1 Parent=GSCOCT00024570001 | |
| 32334 chr10 manual_curation CDS 834586 834659 . - 2 Parent=GSCOCT00024570001 | |
| 32335 chr10 manual_curation CDS 835569 835676 . - 2 Parent=GSCOCT00024570001 | |
| 32336 chr10 manual_curation CDS 835755 835930 . - 0 Parent=GSCOCT00024570001 | |
| 32337 chr10 manual_curation CDS 835999 836049 . - 0 Parent=GSCOCT00024570001 | |
| 32338 chr10 manual_curation CDS 836985 837095 . - 0 Parent=GSCOCT00024570001 | |
| 32339 chr10 manual_curation CDS 837214 837268 . - 2 Parent=GSCOCT00024570001 | |
| 32340 chr10 manual_curation CDS 837412 837528 . - 2 Parent=GSCOCT00024570001 | |
| 32341 chr10 manual_curation CDS 837606 837691 . - 0 Parent=GSCOCT00024570001 | |
| 32342 chr10 manual_curation CDS 838252 838366 . - 2 Parent=GSCOCT00024570001 | |
| 32343 chr10 manual_curation CDS 839049 839236 . - 0 Parent=GSCOCT00024570001 | |
| 32344 chr10 manual_curation gene 846765 848582 . + . ID=GSCOCG00024573001;Name=Cc10_g01070 | |
| 32345 chr10 manual_curation mRNA 846765 848582 . + . ID=GSCOCT00024573001;Parent=GSCOCG00024573001;Name=Cc10_g01070 | |
| 32346 chr10 manual_curation polypeptide 847045 848123 . + . ID=GSCOCP00024573001;Dbxref=InterPro:IPR007853,PANTHER:PTHR20922,PFAM:PF05180,TAIR:AT1G68730.1,TAIR:AT5G27280.1,TrEMBL:B9R8G1,TrEMBL:E0CQV5,TrEMBL:G8Z283;Derives_from=GSCOCT00024573001;Name=Cc10_g01070;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Zim17-type zinc finger protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024573001~ Zim17-type zinc finger protein~ unknown_gene~ complete;original_location=join(847045..847213%2C847328..847416%2C847542..847805%2C847929..848123);owner=coffea | |
| 32347 chr10 manual_curation exon 846765 847213 . + . Parent=GSCOCT00024573001 | |
| 32348 chr10 manual_curation exon 847328 847416 . + . Parent=GSCOCT00024573001 | |
| 32349 chr10 manual_curation exon 847542 847805 . + . Parent=GSCOCT00024573001 | |
| 32350 chr10 manual_curation exon 847929 848582 . + . Parent=GSCOCT00024573001 | |
| 32351 chr10 manual_curation CDS 847045 847213 . + 0 Parent=GSCOCT00024573001 | |
| 32352 chr10 manual_curation CDS 847328 847416 . + 1 Parent=GSCOCT00024573001 | |
| 32353 chr10 manual_curation CDS 847542 847805 . + 0 Parent=GSCOCT00024573001 | |
| 32354 chr10 manual_curation CDS 847929 848123 . + 0 Parent=GSCOCT00024573001 | |
| 32355 chr10 manual_curation gene 850470 851809 . + . ID=GSCOCG00024574001;Name=Cc10_g01080 | |
| 32356 chr10 manual_curation mRNA 850470 851809 . + . ID=GSCOCT00024574001;Parent=GSCOCG00024574001;Name=Cc10_g01080 | |
| 32357 chr10 manual_curation polypeptide 851064 851567 . + . ID=GSCOCP00024574001;Dbxref=GENE3D:G3DSA:2.60.40.420,InterPro:IPR000923,InterPro:IPR001235,InterPro:IPR002387,InterPro:IPR008972,PFAM:PF00127,PRINTS:PR00156,PRINTS:PR00157,PROSITE:PS00196,SUPERFAMILY:SSF49503,SwissProt:P00299,SwissProt:P11970,SwissProt:P16002,TAIR:AT1G20340.1,TAIR:AT1G76100.1,TIGRFAMs:TIGR02656,TrEMBL:A9PG34,TrEMBL:B9R8G0,TrEMBL:D2DMF5;Derives_from=GSCOCT00024574001;Name=Cc10_g01080;Ontology_term=CC_evidence_code:ISS,GO:0005507,GO:0009055,CC_EC_number:missing_EC_number,PRODUCT:Plastocyanin%2C chloroplastic,CC_functional_completeness:complete,CC_gene:PETE;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024574001~ Plastocyanin%2C chloroplastic~ PETE~ complete;original_location=851064..851567;owner=coffea | |
| 32358 chr10 manual_curation exon 850470 851809 . + . Parent=GSCOCT00024574001 | |
| 32359 chr10 manual_curation CDS 851064 851567 . + 0 Parent=GSCOCT00024574001 | |
| 32360 chr10 manual_curation gene 851893 855944 . - . ID=GSCOCG00024575001;Name=Cc10_g01090 | |
| 32361 chr10 manual_curation mRNA 851893 855944 . - . ID=GSCOCT00024575001;Parent=GSCOCG00024575001;Name=Cc10_g01090 | |
| 32362 chr10 manual_curation polypeptide 852141 855944 . - . ID=GSCOCP00024575001;Dbxref=InterPro:IPR001736,InterPro:IPR015679,PANTHER:PTHR18896,PFAM:PF00614,PROFILE:PS50035,SMART:SM00155,SwissProt:O23078,SwissProt:P93733,SwissProt:Q9C5Y0,TAIR:AT2G42010.1,TAIR:AT4G00240.1,TAIR:AT4G35790.1,TrEMBL:B9GQ72,TrEMBL:B9R8F9,TrEMBL:F6H0D4;Derives_from=GSCOCT00024575001;Name=Cc10_g01090;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,CC_EC_number:3.1.4.4,PRODUCT:Phospholipase D delta,CC_functional_completeness:fragment,CC_gene:PLDDELTA,CC_gene:PLDBETA1,CC_gene:PLDBETA2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024575001~ Phospholipase D delta~ PLDDELTA~ fragment;original_location=complement(join(855831..855944%2C855517..855711%2C854757..855038%2C854607..854675%2C854325..854472%2C853947..854095%2C853319..853486%2C852685..852885%2C852141..852434));owner=coffea | |
| 32363 chr10 manual_curation exon 851893 852434 . - . Parent=GSCOCT00024575001 | |
| 32364 chr10 manual_curation exon 852685 852885 . - . Parent=GSCOCT00024575001 | |
| 32365 chr10 manual_curation exon 853319 853486 . - . Parent=GSCOCT00024575001 | |
| 32366 chr10 manual_curation exon 853947 854095 . - . Parent=GSCOCT00024575001 | |
| 32367 chr10 manual_curation exon 854325 854472 . - . Parent=GSCOCT00024575001 | |
| 32368 chr10 manual_curation exon 854607 854675 . - . Parent=GSCOCT00024575001 | |
| 32369 chr10 manual_curation exon 854757 855038 . - . Parent=GSCOCT00024575001 | |
| 32370 chr10 manual_curation exon 855517 855711 . - . Parent=GSCOCT00024575001 | |
| 32371 chr10 manual_curation exon 855831 855944 . - . Parent=GSCOCT00024575001 | |
| 32372 chr10 manual_curation CDS 852141 852434 . - 0 Parent=GSCOCT00024575001 | |
| 32373 chr10 manual_curation CDS 852685 852885 . - 0 Parent=GSCOCT00024575001 | |
| 32374 chr10 manual_curation CDS 853319 853486 . - 0 Parent=GSCOCT00024575001 | |
| 32375 chr10 manual_curation CDS 853947 854095 . - 1 Parent=GSCOCT00024575001 | |
| 32376 chr10 manual_curation CDS 854325 854472 . - 0 Parent=GSCOCT00024575001 | |
| 32377 chr10 manual_curation CDS 854607 854675 . - 0 Parent=GSCOCT00024575001 | |
| 32378 chr10 manual_curation CDS 854757 855038 . - 0 Parent=GSCOCT00024575001 | |
| 32379 chr10 manual_curation CDS 855517 855711 . - 0 Parent=GSCOCT00024575001 | |
| 32380 chr10 manual_curation CDS 855831 855944 . - 0 Parent=GSCOCT00024575001 | |
| 32381 chr10 manual_curation gene 856593 859036 . - . ID=GSCOCG00024576001;Name=Cc10_g01100 | |
| 32382 chr10 manual_curation mRNA 856593 859036 . - . ID=GSCOCT00024576001;Parent=GSCOCG00024576001;Name=Cc10_g01100 | |
| 32383 chr10 manual_curation polypeptide 856593 858605 . - . ID=GSCOCP00024576001;Dbxref=InterPro:IPR000008,InterPro:IPR008973,InterPro:IPR015679,InterPro:IPR018029,PANTHER:PTHR18896,PFAM:PF00168,PROFILE:PS50004,SMART:SM00239,SUPERFAMILY:SSF49562,SwissProt:P93733,SwissProt:Q9C5Y0,SwissProt:Q9T052,TAIR:AT2G42010.1,TAIR:AT4G11840.1,TAIR:AT4G35790.1,TrEMBL:B9R8F9,TrEMBL:F6H0D4,TrEMBL:I1JSY8;Derives_from=GSCOCT00024576001;Name=Cc10_g01100;Ontology_term=CC_evidence_code:ISS,CC_EC_number:3.1.4.4,PRODUCT:Phospholipase D delta,CC_functional_completeness:fragment,CC_gene:PLDDELTA,CC_gene:PLDBETA1,CC_gene:PLDGAMMA3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024576001~ Phospholipase D delta~ PLDDELTA~ fragment;original_location=complement(join(857691..858605%2C856593..856787));owner=coffea | |
| 32384 chr10 manual_curation exon 856593 856787 . - . Parent=GSCOCT00024576001 | |
| 32385 chr10 manual_curation exon 857691 859036 . - . Parent=GSCOCT00024576001 | |
| 32386 chr10 manual_curation CDS 856593 856787 . - 0 Parent=GSCOCT00024576001 | |
| 32387 chr10 manual_curation CDS 857691 858605 . - 0 Parent=GSCOCT00024576001 | |
| 32388 chr10 manual_curation gene 860343 868474 . - . ID=GSCOCG00024577001;Name=Cc10_g01110 | |
| 32389 chr10 manual_curation mRNA 860343 868474 . - . ID=GSCOCT00024577001;Parent=GSCOCG00024577001;Name=Cc10_g01110 | |
| 32390 chr10 manual_curation polypeptide 860605 868331 . - . ID=GSCOCP00024577001;Dbxref=InterPro:IPR001958,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,PFAM:PF07690,PRINTS:PR01035,PROFILE:PS50850,SUPERFAMILY:SSF103473,SwissProt:P70187,SwissProt:Q8CIA9,SwissProt:Q96MC6,TAIR:AT2G16970.1,TAIR:AT2G16980.2,TAIR:AT2G16990.1,TrEMBL:A9PF78,TrEMBL:B9H5C4,TrEMBL:B9R8F8;Derives_from=GSCOCT00024577001;Name=Cc10_g01110;Ontology_term=CC_evidence_code:ISS,GO:0015520,GO:0015904,GO:0016021,GO:0046677,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Putative Major facilitator superfamily protein,CC_functional_completeness:complete,CC_gene:Hiatl1,CC_gene:Hiat1,CC_gene:HIAT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024577001~ Putative Major facilitator superfamily protein~ Hiatl1~ complete;original_location=complement(join(868164..868331%2C865834..865945%2C863983..864095%2C863652..863774%2C863340..863533%2C863079..863154%2C862445..862531%2C862267..862347%2C862046..862078%2C861839..861892%2C861714..861755%2C861208..861286%2C861055..861125%2C860605..860688));owner=coffea | |
| 32391 chr10 manual_curation exon 860343 860688 . - . Parent=GSCOCT00024577001 | |
| 32392 chr10 manual_curation exon 861055 861125 . - . Parent=GSCOCT00024577001 | |
| 32393 chr10 manual_curation exon 861208 861286 . - . Parent=GSCOCT00024577001 | |
| 32394 chr10 manual_curation exon 861714 861755 . - . Parent=GSCOCT00024577001 | |
| 32395 chr10 manual_curation exon 861839 861892 . - . Parent=GSCOCT00024577001 | |
| 32396 chr10 manual_curation exon 862046 862078 . - . Parent=GSCOCT00024577001 | |
| 32397 chr10 manual_curation exon 862267 862347 . - . Parent=GSCOCT00024577001 | |
| 32398 chr10 manual_curation exon 862445 862531 . - . Parent=GSCOCT00024577001 | |
| 32399 chr10 manual_curation exon 863079 863154 . - . Parent=GSCOCT00024577001 | |
| 32400 chr10 manual_curation exon 863340 863533 . - . Parent=GSCOCT00024577001 | |
| 32401 chr10 manual_curation exon 863652 863774 . - . Parent=GSCOCT00024577001 | |
| 32402 chr10 manual_curation exon 863983 864095 . - . Parent=GSCOCT00024577001 | |
| 32403 chr10 manual_curation exon 865834 865945 . - . Parent=GSCOCT00024577001 | |
| 32404 chr10 manual_curation exon 868164 868474 . - . Parent=GSCOCT00024577001 | |
| 32405 chr10 manual_curation CDS 860605 860688 . - 0 Parent=GSCOCT00024577001 | |
| 32406 chr10 manual_curation CDS 861055 861125 . - 1 Parent=GSCOCT00024577001 | |
| 32407 chr10 manual_curation CDS 861208 861286 . - 0 Parent=GSCOCT00024577001 | |
| 32408 chr10 manual_curation CDS 861714 861755 . - 0 Parent=GSCOCT00024577001 | |
| 32409 chr10 manual_curation CDS 861839 861892 . - 0 Parent=GSCOCT00024577001 | |
| 32410 chr10 manual_curation CDS 862046 862078 . - 0 Parent=GSCOCT00024577001 | |
| 32411 chr10 manual_curation CDS 862267 862347 . - 0 Parent=GSCOCT00024577001 | |
| 32412 chr10 manual_curation CDS 862445 862531 . - 0 Parent=GSCOCT00024577001 | |
| 32413 chr10 manual_curation CDS 863079 863154 . - 2 Parent=GSCOCT00024577001 | |
| 32414 chr10 manual_curation CDS 863340 863533 . - 0 Parent=GSCOCT00024577001 | |
| 32415 chr10 manual_curation CDS 863652 863774 . - 0 Parent=GSCOCT00024577001 | |
| 32416 chr10 manual_curation CDS 863983 864095 . - 1 Parent=GSCOCT00024577001 | |
| 32417 chr10 manual_curation CDS 865834 865945 . - 0 Parent=GSCOCT00024577001 | |
| 32418 chr10 manual_curation CDS 868164 868331 . - 0 Parent=GSCOCT00024577001 | |
| 32419 chr10 manual_curation gene 870109 871384 . + . ID=GSCOCG00024578001;Name=Cc10_g01120 | |
| 32420 chr10 manual_curation mRNA 870109 871384 . + . ID=GSCOCT00024578001;Parent=GSCOCG00024578001;Name=Cc10_g01120 | |
| 32421 chr10 manual_curation polypeptide 870181 871086 . + . ID=GSCOCP00024578001;Dbxref=GENE3D:G3DSA:3.40.30.10,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR013766,PANTHER:PTHR10438,PFAM:PF00085,SUPERFAMILY:SSF52833,SwissProt:Q84NN4,SwissProt:Q9SGS4,TAIR:AT1G76080.1,TrEMBL:B9R8F6,TrEMBL:F6H0D6,TrEMBL:O04002;Derives_from=GSCOCT00024578001;Name=Cc10_g01120;Ontology_term=CC_evidence_code:ISS,GO:0045454,CC_EC_number:missing_EC_number,PRODUCT:Thioredoxin-like protein CDSP32%2C chloroplastic,CC_functional_completeness:complete,CC_gene:CDSP32;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024578001~ Thioredoxin-like protein CDSP32%2C chloroplastic~ CDSP32~ complete;original_location=870181..871086;owner=coffea | |
| 32422 chr10 manual_curation exon 870109 871384 . + . Parent=GSCOCT00024578001 | |
| 32423 chr10 manual_curation CDS 870181 871086 . + 0 Parent=GSCOCT00024578001 | |
| 32424 chr10 manual_curation gene 874257 875048 . - . ID=GSCOCG00024579001;Name=Cc10_g01130 | |
| 32425 chr10 manual_curation mRNA 874257 875048 . - . ID=GSCOCT00024579001;Parent=GSCOCG00024579001;Name=Cc10_g01130 | |
| 32426 chr10 manual_curation polypeptide 874257 875048 . - . ID=GSCOCP00024579001;Dbxref=SwissProt:Q9SGS5,TAIR:AT1G20310.1,TAIR:AT1G76070.1,TrEMBL:A5C359,TrEMBL:B9GQ75,TrEMBL:B9R8F5;Derives_from=GSCOCT00024579001;Name=Cc10_g01130;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized protein At1g76070,CC_functional_completeness:complete,CC_gene:At1g76070;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024579001~ Putative Uncharacterized protein At1g76070~ At1g76070~ complete;original_location=complement(874257..875048);owner=coffea | |
| 32427 chr10 manual_curation exon 874257 875048 . - . Parent=GSCOCT00024579001 | |
| 32428 chr10 manual_curation CDS 874257 875048 . - 0 Parent=GSCOCT00024579001 | |
| 32429 chr10 manual_curation gene 878281 879853 . + . ID=GSCOCG00024580001;Name=Cc10_g01140 | |
| 32430 chr10 manual_curation mRNA 878281 879853 . + . ID=GSCOCT00024580001;Parent=GSCOCG00024580001;Name=Cc10_g01140 | |
| 32431 chr10 manual_curation polypeptide 878544 879307 . + . ID=GSCOCP00024580001;Dbxref=InterPro:IPR008011,PFAM:PF05347,TAIR:AT1G76065.1,TrEMBL:A9P9V6,TrEMBL:I1MY62,TrEMBL:Q9LQR2;Derives_from=GSCOCT00024580001;Name=Cc10_g01140;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:LYR family of Fe/S cluster biogenesis protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024580001~ LYR family of Fe/S cluster biogenesis protein~ unknown_gene~ complete;original_location=join(878544..878655%2C879162..879307);owner=coffea | |
| 32432 chr10 manual_curation exon 878281 878655 . + . Parent=GSCOCT00024580001 | |
| 32433 chr10 manual_curation exon 879162 879853 . + . Parent=GSCOCT00024580001 | |
| 32434 chr10 manual_curation CDS 878544 878655 . + 0 Parent=GSCOCT00024580001 | |
| 32435 chr10 manual_curation CDS 879162 879307 . + 1 Parent=GSCOCT00024580001 | |
| 32436 chr10 manual_curation gene 880779 882992 . + . ID=GSCOCG00024581001;Name=Cc10_g01150 | |
| 32437 chr10 manual_curation mRNA 880779 882992 . + . ID=GSCOCT00024581001;Parent=GSCOCG00024581001;Name=Cc10_g01150 | |
| 32438 chr10 manual_curation polypeptide 880927 881394 . + . ID=GSCOCP00024581001;Dbxref=InterPro:IPR008011,PFAM:PF05347,TAIR:AT1G76060.1,TrEMBL:B9GQ76,TrEMBL:B9RY99,TrEMBL:D7KT92;Derives_from=GSCOCT00024581001;Name=Cc10_g01150;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:LYR family of Fe/S cluster biogenesis protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024581001~ LYR family of Fe/S cluster biogenesis protein~ unknown_gene~ complete;original_location=880927..881394;owner=coffea | |
| 32439 chr10 manual_curation exon 882840 882992 . + . Parent=GSCOCT00024581001 | |
| 32440 chr10 manual_curation exon 880779 881400 . + . Parent=GSCOCT00024581001 | |
| 32441 chr10 manual_curation CDS 880927 881394 . + 0 Parent=GSCOCT00024581001 | |
| 32442 chr10 manual_curation gene 883044 889216 . + . ID=GSCOCG00024582001;Name=Cc10_g01160 | |
| 32443 chr10 manual_curation mRNA 883044 889216 . + . ID=GSCOCT00024582001;Parent=GSCOCG00024582001;Name=Cc10_g01160 | |
| 32444 chr10 manual_curation polypeptide 884688 888204 . + . ID=GSCOCP00024582001;Dbxref=InterPro:IPR005123,InterPro:IPR006620,PFAM:PF03171,SMART:SM00702,SwissProt:P54001,SwissProt:Q20065,SwissProt:Q60715,TAIR:AT1G20270.1,TAIR:AT2G17720.1,TAIR:AT5G66060.1,TrEMBL:D7KIA9,TrEMBL:Q8LEY1,TrEMBL:Q9LN20;Derives_from=GSCOCT00024582001;Name=Cc10_g01160;Ontology_term=CC_evidence_code:ISS,GO:0005506,GO:0016491,GO:0031418,GO:0055114,CC_EC_number:1.14.11.2,PRODUCT:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein,CC_functional_completeness:complete,CC_gene:P4ha1,CC_gene:phy-2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024582001~ 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein~ P4ha1~ complete;original_location=join(884688..884890%2C885039..885129%2C885505..885602%2C885740..885837%2C887366..887495%2C887639..887826%2C888131..888204);owner=coffea | |
| 32445 chr10 manual_curation exon 883044 884890 . + . Parent=GSCOCT00024582001 | |
| 32446 chr10 manual_curation exon 885039 885129 . + . Parent=GSCOCT00024582001 | |
| 32447 chr10 manual_curation exon 885505 885602 . + . Parent=GSCOCT00024582001 | |
| 32448 chr10 manual_curation exon 885740 885837 . + . Parent=GSCOCT00024582001 | |
| 32449 chr10 manual_curation exon 887366 887495 . + . Parent=GSCOCT00024582001 | |
| 32450 chr10 manual_curation exon 887639 887826 . + . Parent=GSCOCT00024582001 | |
| 32451 chr10 manual_curation exon 888131 889216 . + . Parent=GSCOCT00024582001 | |
| 32452 chr10 manual_curation CDS 884688 884890 . + 0 Parent=GSCOCT00024582001 | |
| 32453 chr10 manual_curation CDS 885039 885129 . + 2 Parent=GSCOCT00024582001 | |
| 32454 chr10 manual_curation CDS 885505 885602 . + 0 Parent=GSCOCT00024582001 | |
| 32455 chr10 manual_curation CDS 885740 885837 . + 2 Parent=GSCOCT00024582001 | |
| 32456 chr10 manual_curation CDS 887366 887495 . + 1 Parent=GSCOCT00024582001 | |
| 32457 chr10 manual_curation CDS 887639 887826 . + 2 Parent=GSCOCT00024582001 | |
| 32458 chr10 manual_curation CDS 888131 888204 . + 1 Parent=GSCOCT00024582001 | |
| 32459 chr10 manual_curation gene 889494 893552 . - . ID=GSCOCG00024583001;Name=Cc10_g01170 | |
| 32460 chr10 manual_curation mRNA 889494 893552 . - . ID=GSCOCT00024583001;Parent=GSCOCG00024583001;Name=Cc10_g01170 | |
| 32461 chr10 manual_curation polypeptide 890208 893468 . - . ID=GSCOCP00024583001;Dbxref=InterPro:IPR002942,InterPro:IPR006145,InterPro:IPR006224,InterPro:IPR006225,InterPro:IPR020103,PFAM:PF00849,PFAM:PF01479,PROFILE:PS50889,PROSITE:PS01129,SMART:SM00363,SUPERFAMILY:SSF55120,SwissProt:Q3ECD0,SwissProt:Q45480,SwissProt:Q5Z8P2,TAIR:AT1G76050.2,TAIR:AT3G19440.1,TAIR:AT5G51140.2,TIGRFAMs:TIGR00005,TrEMBL:B9GQ77,TrEMBL:E0CQW6,TrEMBL:I1JSZ4;Derives_from=GSCOCT00024583001;Name=Cc10_g01170;Ontology_term=CC_evidence_code:ISS,GO:0001522,GO:0003723,GO:0009451,GO:0009982,CC_EC_number:missing_EC_number,PRODUCT:RNA pseudourine synthase 2%2C chloroplastic,CC_functional_completeness:complete,CC_gene:At1g76050,CC_gene:Os06g0717400,CC_gene:ylyB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024583001~ RNA pseudourine synthase 2%2C chloroplastic~ At1g76050~ complete;original_location=complement(join(893130..893468%2C892852..892995%2C891992..892252%2C891666..891868%2C891397..891475%2C890704..890879%2C890496..890598%2C890208..890231));owner=coffea | |
| 32462 chr10 manual_curation exon 889494 890231 . - . Parent=GSCOCT00024583001 | |
| 32463 chr10 manual_curation exon 890496 890598 . - . Parent=GSCOCT00024583001 | |
| 32464 chr10 manual_curation exon 890704 890879 . - . Parent=GSCOCT00024583001 | |
| 32465 chr10 manual_curation exon 891397 891475 . - . Parent=GSCOCT00024583001 | |
| 32466 chr10 manual_curation exon 891666 891868 . - . Parent=GSCOCT00024583001 | |
| 32467 chr10 manual_curation exon 891992 892252 . - . Parent=GSCOCT00024583001 | |
| 32468 chr10 manual_curation exon 892852 892995 . - . Parent=GSCOCT00024583001 | |
| 32469 chr10 manual_curation exon 893130 893552 . - . Parent=GSCOCT00024583001 | |
| 32470 chr10 manual_curation CDS 890208 890231 . - 0 Parent=GSCOCT00024583001 | |
| 32471 chr10 manual_curation CDS 890496 890598 . - 2 Parent=GSCOCT00024583001 | |
| 32472 chr10 manual_curation CDS 890704 890879 . - 0 Parent=GSCOCT00024583001 | |
| 32473 chr10 manual_curation CDS 891397 891475 . - 2 Parent=GSCOCT00024583001 | |
| 32474 chr10 manual_curation CDS 891666 891868 . - 0 Parent=GSCOCT00024583001 | |
| 32475 chr10 manual_curation CDS 891992 892252 . - 0 Parent=GSCOCT00024583001 | |
| 32476 chr10 manual_curation CDS 892852 892995 . - 0 Parent=GSCOCT00024583001 | |
| 32477 chr10 manual_curation CDS 893130 893468 . - 0 Parent=GSCOCT00024583001 | |
| 32478 chr10 manual_curation gene 893983 899296 . - . ID=GSCOCG00024584001;Name=Cc10_g01180 | |
| 32479 chr10 manual_curation mRNA 893983 899296 . - . ID=GSCOCT00024584001;Parent=GSCOCG00024584001;Name=Cc10_g01180 | |
| 32480 chr10 manual_curation polypeptide 894208 899296 . - . ID=GSCOCP00024584001;Dbxref=GENE3D:G3DSA:1.10.238.10,InterPro:IPR000719,InterPro:IPR002048,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR011992,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR018247,InterPro:IPR018248,InterPro:IPR018249,InterPro:IPR020635,InterPro:IPR020636,InterPro:IPR020642,PANTHER:PTHR22982,PANTHER:PTHR22982:SF13,PFAM:PF00036,PFAM:PF00069,PROFILE:PS50011,PROFILE:PS50222,PROSITE:PS00018,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00054,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:P53683,SwissProt:Q8RWL2,SwissProt:Q9ZSA2,TAIR:AT1G50700.1,TAIR:AT1G76040.2,TAIR:AT4G04720.1,TrEMBL:A5AVW8,TrEMBL:B9R8F1,TrEMBL:E0CQW8;Derives_from=GSCOCT00024584001;Name=Cc10_g01180;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005509,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.17,PRODUCT:Calcium-dependent protein kinase 29,CC_functional_completeness:complete,CC_gene:CPK29,CC_gene:CPK2,CC_gene:CPK21;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024584001~ Calcium-dependent protein kinase 29~ CPK29~ complete;original_location=complement(join(898582..899296%2C896175..896318%2C895821..895973%2C895430..895545%2C894964..895131%2C894689..894816%2C894370..894469%2C894208..894288));owner=coffea | |
| 32481 chr10 manual_curation exon 893983 894288 . - . Parent=GSCOCT00024584001 | |
| 32482 chr10 manual_curation exon 894370 894469 . - . Parent=GSCOCT00024584001 | |
| 32483 chr10 manual_curation exon 894689 894816 . - . Parent=GSCOCT00024584001 | |
| 32484 chr10 manual_curation exon 894964 895131 . - . Parent=GSCOCT00024584001 | |
| 32485 chr10 manual_curation exon 895430 895545 . - . Parent=GSCOCT00024584001 | |
| 32486 chr10 manual_curation exon 895821 895973 . - . Parent=GSCOCT00024584001 | |
| 32487 chr10 manual_curation exon 896175 896318 . - . Parent=GSCOCT00024584001 | |
| 32488 chr10 manual_curation exon 898582 899296 . - . Parent=GSCOCT00024584001 | |
| 32489 chr10 manual_curation CDS 894208 894288 . - 0 Parent=GSCOCT00024584001 | |
| 32490 chr10 manual_curation CDS 894370 894469 . - 2 Parent=GSCOCT00024584001 | |
| 32491 chr10 manual_curation CDS 894689 894816 . - 0 Parent=GSCOCT00024584001 | |
| 32492 chr10 manual_curation CDS 894964 895131 . - 0 Parent=GSCOCT00024584001 | |
| 32493 chr10 manual_curation CDS 895430 895545 . - 1 Parent=GSCOCT00024584001 | |
| 32494 chr10 manual_curation CDS 895821 895973 . - 1 Parent=GSCOCT00024584001 | |
| 32495 chr10 manual_curation CDS 896175 896318 . - 1 Parent=GSCOCT00024584001 | |
| 32496 chr10 manual_curation CDS 898582 899296 . - 0 Parent=GSCOCT00024584001 | |
| 32497 chr10 manual_curation gene 900476 903350 . - . ID=GSCOCG00024586001;Name=Cc10_g01190 | |
| 32498 chr10 manual_curation mRNA 900476 903350 . - . ID=GSCOCT00024586001;Parent=GSCOCG00024586001;Name=Cc10_g01190 | |
| 32499 chr10 manual_curation polypeptide 901068 903350 . - . ID=GSCOCP00024586001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q9LNU6,SwissProt:Q9LW63,SwissProt:Q9SHZ8,TAIR:AT1G20230.1,TAIR:AT2G22070.1,TAIR:AT3G23330.1,TIGRFAMs:TIGR00756,TrEMBL:A5BML2,TrEMBL:F6H0E5,TrEMBL:I1MQM3;Derives_from=GSCOCT00024586001;Name=Cc10_g01190;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At1g20230,CC_functional_completeness:complete,CC_gene:PCMP-H21,CC_gene:PCMP-H32,CC_gene:PCMP-H41;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024586001~ Pentatricopeptide repeat-containing protein At1g20230~ PCMP-H21~ complete;original_location=complement(901068..903350);owner=coffea | |
| 32500 chr10 manual_curation exon 900476 903350 . - . Parent=GSCOCT00024586001 | |
| 32501 chr10 manual_curation CDS 901068 903350 . - 0 Parent=GSCOCT00024586001 | |
| 32502 chr10 manual_curation gene 903546 907811 . - . ID=GSCOCG00024587001;Name=Cc10_g01200 | |
| 32503 chr10 manual_curation mRNA 903546 907811 . - . ID=GSCOCT00024587001;Parent=GSCOCG00024587001;Name=Cc10_g01200 | |
| 32504 chr10 manual_curation polypeptide 903925 907430 . - . ID=GSCOCP00024587001;Dbxref=GENE3D:G3DSA:3.40.30.10,InterPro:IPR000866,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR017936,PFAM:PF00578,PROFILE:PS51352,SUPERFAMILY:SSF52833,SwissProt:O80763,SwissProt:Q0JIL1,SwissProt:Q7Y0E8,TAIR:AT1G60420.1,TAIR:AT4G31240.1,TrEMBL:B9H525,TrEMBL:B9R8F0,TrEMBL:F6H0E3;Derives_from=GSCOCT00024587001;Name=Cc10_g01200;Ontology_term=CC_evidence_code:ISS,GO:0016209,GO:0016491,GO:0045454,CC_EC_number:missing_EC_number,PRODUCT:Probable nucleoredoxin 2,CC_functional_completeness:complete,CC_gene:Os01g0794400,CC_gene:At1g60420,CC_gene:Os03g0405500;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024587001~ Probable nucleoredoxin 2~ Os01g0794400~ complete;original_location=complement(join(907287..907430%2C904878..905372%2C903925..904560));owner=coffea | |
| 32505 chr10 manual_curation exon 903546 904560 . - . Parent=GSCOCT00024587001 | |
| 32506 chr10 manual_curation exon 904878 905372 . - . Parent=GSCOCT00024587001 | |
| 32507 chr10 manual_curation exon 907287 907811 . - . Parent=GSCOCT00024587001 | |
| 32508 chr10 manual_curation CDS 903925 904560 . - 0 Parent=GSCOCT00024587001 | |
| 32509 chr10 manual_curation CDS 904878 905372 . - 0 Parent=GSCOCT00024587001 | |
| 32510 chr10 manual_curation CDS 907287 907430 . - 0 Parent=GSCOCT00024587001 | |
| 32511 chr10 manual_curation gene 925911 927102 . - . ID=GSCOCG00024589001;Name=Cc10_g01210 | |
| 32512 chr10 manual_curation mRNA 925911 927102 . - . ID=GSCOCT00024589001;Parent=GSCOCG00024589001;Name=Cc10_g01210 | |
| 32513 chr10 manual_curation polypeptide 926233 926643 . - . ID=GSCOCP00024589001;Dbxref=InterPro:IPR001841,InterPro:IPR018957,PFAM:PF00097,PROFILE:PS50089,SMART:SM00184,SwissProt:Q8L9W3,SwissProt:Q8LFY8,SwissProt:Q9SN28,TAIR:AT1G72220.1,TAIR:AT4G10150.1,TAIR:AT5G42200.1,TrEMBL:B9GQ80,TrEMBL:B9H524,TrEMBL:B9R8E9;Derives_from=GSCOCT00024589001;Name=Cc10_g01210;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:E3 ubiquitin-protein ligase ATL23,CC_functional_completeness:fragment,CC_gene:ATL23,CC_gene:ATL54,CC_gene:ATL7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024589001~ E3 ubiquitin-protein ligase ATL23~ ATL23~ fragment;original_location=complement(926233..926643);owner=coffea | |
| 32514 chr10 manual_curation exon 925911 926066 . - . Parent=GSCOCT00024589001 | |
| 32515 chr10 manual_curation exon 926175 927102 . - . Parent=GSCOCT00024589001 | |
| 32516 chr10 manual_curation CDS 926233 926643 . - 0 Parent=GSCOCT00024589001 | |
| 32517 chr10 manual_curation gene 929934 932939 . + . ID=GSCOCG00024591001;Name=Cc10_g01220 | |
| 32518 chr10 manual_curation mRNA 929934 932939 . + . ID=GSCOCT00024591001;Parent=GSCOCG00024591001;Name=Cc10_g01220 | |
| 32519 chr10 manual_curation polypeptide 930396 932939 . + . ID=GSCOCP00024591001;Dbxref=InterPro:IPR012336,SUPERFAMILY:SSF52833,TAIR:AT1G20225.1,TAIR:AT1G76020.1,TrEMBL:B9GQ81,TrEMBL:B9H523,TrEMBL:Q2XTB4;Derives_from=GSCOCT00024591001;Name=Cc10_g01220;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Thioredoxin superfamily protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024591001~ Thioredoxin superfamily protein~ unknown_gene~ modules;original_location=join(930396..930667%2C930986..931088%2C931820..931981%2C932120..932249%2C932833..932939);owner=coffea | |
| 32520 chr10 manual_curation exon 929934 930667 . + . Parent=GSCOCT00024591001 | |
| 32521 chr10 manual_curation exon 930986 931088 . + . Parent=GSCOCT00024591001 | |
| 32522 chr10 manual_curation exon 931820 931981 . + . Parent=GSCOCT00024591001 | |
| 32523 chr10 manual_curation exon 932120 932249 . + . Parent=GSCOCT00024591001 | |
| 32524 chr10 manual_curation exon 932833 932939 . + . Parent=GSCOCT00024591001 | |
| 32525 chr10 manual_curation CDS 930396 930667 . + 0 Parent=GSCOCT00024591001 | |
| 32526 chr10 manual_curation CDS 930986 931088 . + 2 Parent=GSCOCT00024591001 | |
| 32527 chr10 manual_curation CDS 931820 931981 . + 0 Parent=GSCOCT00024591001 | |
| 32528 chr10 manual_curation CDS 932120 932249 . + 0 Parent=GSCOCT00024591001 | |
| 32529 chr10 manual_curation CDS 932833 932939 . + 1 Parent=GSCOCT00024591001 | |
| 32530 chr10 manual_curation gene 933976 937926 . + . ID=GSCOCG00024592001;Name=Cc10_g01230 | |
| 32531 chr10 manual_curation mRNA 933976 937926 . + . ID=GSCOCT00024592001;Parent=GSCOCG00024592001;Name=Cc10_g01230 | |
| 32532 chr10 manual_curation polypeptide 934417 937644 . + . ID=GSCOCP00024592001;Dbxref=InterPro:IPR002775,PFAM:PF01918,SwissProt:Q2KIR4,SwissProt:Q8N5L8,SwissProt:Q99JH1,TAIR:AT1G20220.1,TAIR:AT1G76010.1,TAIR:AT3G07030.1,TrEMBL:A5ALH8,TrEMBL:C6TE19,TrEMBL:F6H0E7;Derives_from=GSCOCT00024592001;Name=Cc10_g01230;Ontology_term=CC_evidence_code:ISS,GO:0003676,CC_EC_number:3.1.26.5,PRODUCT:Putative Ribonuclease P protein subunit p25-like protein,CC_functional_completeness:modules,CC_gene:RPP25L,CC_gene:Rpp25l;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024592001~ Putative Ribonuclease P protein subunit p25-like protein~ RPP25L~ modules;original_location=join(934417..934539%2C935394..935474%2C935572..935660%2C935813..935887%2C936028..936089%2C936174..936242%2C936623..936811%2C937556..937644);owner=coffea | |
| 32533 chr10 manual_curation exon 933976 934091 . + . Parent=GSCOCT00024592001 | |
| 32534 chr10 manual_curation exon 934414 934539 . + . Parent=GSCOCT00024592001 | |
| 32535 chr10 manual_curation exon 935394 935474 . + . Parent=GSCOCT00024592001 | |
| 32536 chr10 manual_curation exon 935572 935660 . + . Parent=GSCOCT00024592001 | |
| 32537 chr10 manual_curation exon 935813 935887 . + . Parent=GSCOCT00024592001 | |
| 32538 chr10 manual_curation exon 936028 936089 . + . Parent=GSCOCT00024592001 | |
| 32539 chr10 manual_curation exon 936174 936242 . + . Parent=GSCOCT00024592001 | |
| 32540 chr10 manual_curation exon 936623 936811 . + . Parent=GSCOCT00024592001 | |
| 32541 chr10 manual_curation exon 937556 937926 . + . Parent=GSCOCT00024592001 | |
| 32542 chr10 manual_curation CDS 934417 934539 . + 0 Parent=GSCOCT00024592001 | |
| 32543 chr10 manual_curation CDS 935394 935474 . + 0 Parent=GSCOCT00024592001 | |
| 32544 chr10 manual_curation CDS 935572 935660 . + 0 Parent=GSCOCT00024592001 | |
| 32545 chr10 manual_curation CDS 935813 935887 . + 2 Parent=GSCOCT00024592001 | |
| 32546 chr10 manual_curation CDS 936028 936089 . + 2 Parent=GSCOCT00024592001 | |
| 32547 chr10 manual_curation CDS 936174 936242 . + 1 Parent=GSCOCT00024592001 | |
| 32548 chr10 manual_curation CDS 936623 936811 . + 1 Parent=GSCOCT00024592001 | |
| 32549 chr10 manual_curation CDS 937556 937644 . + 1 Parent=GSCOCT00024592001 | |
| 32550 chr10 manual_curation gene 943586 945974 . + . ID=GSCOCG00024594001;Name=Cc10_g01240 | |
| 32551 chr10 manual_curation mRNA 943586 945974 . + . ID=GSCOCT00024594001;Parent=GSCOCG00024594001;Name=Cc10_g01240 | |
| 32552 chr10 manual_curation polypeptide 943690 945974 . + . ID=GSCOCP00024594001;Dbxref=InterPro:IPR002938,InterPro:IPR003042,PFAM:PF01494,PRINTS:PR00420,SwissProt:P86491,SwissProt:Q9F131,SwissProt:Q9FGC7,TAIR:AT2G35660.1,TAIR:AT4G38540.1,TAIR:AT5G05320.1,TrEMBL:B9P630,TrEMBL:F6H0E9,TrEMBL:Q8H9C4;Derives_from=GSCOCT00024594001;Name=Cc10_g01240;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0008152,GO:0016491,GO:0055114,CC_EC_number:1.14.13.1,PRODUCT:Putative 3-hydroxybenzoate 6-hydroxylase 1,CC_functional_completeness:complete,CC_gene:xlnD,CC_gene:ZEP;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024594001~ Putative 3-hydroxybenzoate 6-hydroxylase 1~ xlnD~ complete;original_location=join(943690..943763%2C943911..944057%2C944165..944230%2C944653..944818%2C945005..945236%2C945415..945974);owner=coffea | |
| 32553 chr10 manual_curation exon 943586 943763 . + . Parent=GSCOCT00024594001 | |
| 32554 chr10 manual_curation exon 943911 944057 . + . Parent=GSCOCT00024594001 | |
| 32555 chr10 manual_curation exon 944165 944230 . + . Parent=GSCOCT00024594001 | |
| 32556 chr10 manual_curation exon 944653 944818 . + . Parent=GSCOCT00024594001 | |
| 32557 chr10 manual_curation exon 945005 945236 . + . Parent=GSCOCT00024594001 | |
| 32558 chr10 manual_curation exon 945415 945974 . + . Parent=GSCOCT00024594001 | |
| 32559 chr10 manual_curation CDS 943690 943763 . + 0 Parent=GSCOCT00024594001 | |
| 32560 chr10 manual_curation CDS 943911 944057 . + 2 Parent=GSCOCT00024594001 | |
| 32561 chr10 manual_curation CDS 944165 944230 . + 2 Parent=GSCOCT00024594001 | |
| 32562 chr10 manual_curation CDS 944653 944818 . + 2 Parent=GSCOCT00024594001 | |
| 32563 chr10 manual_curation CDS 945005 945236 . + 0 Parent=GSCOCT00024594001 | |
| 32564 chr10 manual_curation CDS 945415 945974 . + 1 Parent=GSCOCT00024594001 | |
| 32565 chr10 manual_curation gene 949947 951048 . + . ID=GSCOCG00024595001;Name=Cc10_g01250 | |
| 32566 chr10 manual_curation mRNA 949947 951048 . + . ID=GSCOCT00024595001;Parent=GSCOCG00024595001;Name=Cc10_g01250 | |
| 32567 chr10 manual_curation polypeptide 950083 951048 . + . ID=GSCOCP00024595001;Dbxref=GENE3D:G3DSA:2.40.40.40,GENE3D:G3DSA:2.60.40.760,InterPro:IPR002963,InterPro:IPR005132,InterPro:IPR007112,InterPro:IPR007117,InterPro:IPR007118,InterPro:IPR009009,InterPro:IPR014734,PFAM:PF01357,PFAM:PF03330,PRINTS:PR01225,PRINTS:PR01226,PROFILE:PS50842,PROFILE:PS50843,SUPERFAMILY:SSF49590,SUPERFAMILY:SSF50685,SwissProt:Q4PR39,SwissProt:Q7XWU8,SwissProt:Q9LNU3,TAIR:AT1G20190.1,TAIR:AT1G69530.3,TAIR:AT4G01630.1,TrEMBL:E0CQY0,TrEMBL:Q6KEZ3,TrEMBL:Q9FVH0;Derives_from=GSCOCT00024595001;Name=Cc10_g01250;Ontology_term=CC_evidence_code:ISS,GO:0005576,GO:0009664,CC_EC_number:missing_EC_number,PRODUCT:Expansin-A1,CC_functional_completeness:complete,CC_gene:EXPA1,CC_gene:EXPA29,CC_gene:EXPA11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024595001~ Expansin-A1~ EXPA1~ complete;original_location=join(950083..950230%2C950319..950640%2C950739..951048);owner=coffea | |
| 32568 chr10 manual_curation exon 949947 950230 . + . Parent=GSCOCT00024595001 | |
| 32569 chr10 manual_curation exon 950319 950640 . + . Parent=GSCOCT00024595001 | |
| 32570 chr10 manual_curation exon 950739 951048 . + . Parent=GSCOCT00024595001 | |
| 32571 chr10 manual_curation CDS 950083 950230 . + 0 Parent=GSCOCT00024595001 | |
| 32572 chr10 manual_curation CDS 950319 950640 . + 1 Parent=GSCOCT00024595001 | |
| 32573 chr10 manual_curation CDS 950739 951048 . + 2 Parent=GSCOCT00024595001 | |
| 32574 chr10 manual_curation gene 951366 951779 . - . ID=GSCOCG00024596001;Name=Cc10_g01260 | |
| 32575 chr10 manual_curation mRNA 951366 951779 . - . ID=GSCOCT00024596001;Parent=GSCOCG00024596001;Name=Cc10_g01260 | |
| 32576 chr10 manual_curation polypeptide 951366 951536 . - . ID=GSCOCP00024596001;Derives_from=GSCOCT00024596001;Name=Cc10_g01260;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024596001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(951366..951536);owner=coffea | |
| 32577 chr10 manual_curation exon 951366 951779 . - . Parent=GSCOCT00024596001 | |
| 32578 chr10 manual_curation CDS 951366 951536 . - 0 Parent=GSCOCT00024596001 | |
| 32579 chr10 manual_curation gene 953761 955180 . + . ID=GSCOCG00024597001;Name=Cc10_g01270 | |
| 32580 chr10 manual_curation mRNA 953761 955180 . + . ID=GSCOCT00024597001;Parent=GSCOCG00024597001;Name=Cc10_g01270 | |
| 32581 chr10 manual_curation polypeptide 953761 955180 . + . ID=GSCOCP00024597001;Dbxref=InterPro:IPR000823,InterPro:IPR002016,InterPro:IPR010255,InterPro:IPR019793,PFAM:PF00141,PRINTS:PR00458,PRINTS:PR00461,PROFILE:PS50873,PROSITE:PS00435,SUPERFAMILY:SSF48113,SwissProt:P37834,SwissProt:Q43872,SwissProt:Q9LT91,TAIR:AT1G05260.1,TAIR:AT5G42180.1,TAIR:AT5G51890.1,TrEMBL:B9GQQ9,TrEMBL:B9R8E4,TrEMBL:E0CQY1;Derives_from=GSCOCT00024597001;Name=Cc10_g01270;Ontology_term=CC_evidence_code:ISS,GO:0004601,GO:0006979,GO:0020037,GO:0055114,CC_EC_number:1.11.1.7,PRODUCT:Peroxidase 64,CC_functional_completeness:complete,CC_gene:PER64,CC_gene:PER66,CC_gene:PRX74;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024597001~ Peroxidase 64~ PER64~ complete;original_location=join(953761..953826%2C953931..954119%2C954416..954578%2C954780..955180);owner=coffea | |
| 32582 chr10 manual_curation exon 953761 953826 . + . Parent=GSCOCT00024597001 | |
| 32583 chr10 manual_curation exon 953931 954119 . + . Parent=GSCOCT00024597001 | |
| 32584 chr10 manual_curation exon 954416 954578 . + . Parent=GSCOCT00024597001 | |
| 32585 chr10 manual_curation exon 954780 955180 . + . Parent=GSCOCT00024597001 | |
| 32586 chr10 manual_curation CDS 953761 953826 . + 0 Parent=GSCOCT00024597001 | |
| 32587 chr10 manual_curation CDS 953931 954119 . + 0 Parent=GSCOCT00024597001 | |
| 32588 chr10 manual_curation CDS 954416 954578 . + 0 Parent=GSCOCT00024597001 | |
| 32589 chr10 manual_curation CDS 954780 955180 . + 1 Parent=GSCOCT00024597001 | |
| 32590 chr10 manual_curation gene 956642 957577 . + . ID=GSCOCG00024598001;Name=Cc10_g01280 | |
| 32591 chr10 manual_curation mRNA 956642 957577 . + . ID=GSCOCT00024598001;Parent=GSCOCG00024598001;Name=Cc10_g01280 | |
| 32592 chr10 manual_curation polypeptide 956767 957548 . + . ID=GSCOCP00024598001;Dbxref=TAIR:AT1G75980.1,TrEMBL:B9R8E3,TrEMBL:I1K7H5,TrEMBL:I1K7H6;Derives_from=GSCOCT00024598001;Name=Cc10_g01280;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024598001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(956767..957001%2C957130..957178%2C957276..957402%2C957537..957548);owner=coffea | |
| 32593 chr10 manual_curation exon 956642 957001 . + . Parent=GSCOCT00024598001 | |
| 32594 chr10 manual_curation exon 957130 957178 . + . Parent=GSCOCT00024598001 | |
| 32595 chr10 manual_curation exon 957276 957402 . + . Parent=GSCOCT00024598001 | |
| 32596 chr10 manual_curation exon 957537 957577 . + . Parent=GSCOCT00024598001 | |
| 32597 chr10 manual_curation CDS 956767 957001 . + 0 Parent=GSCOCT00024598001 | |
| 32598 chr10 manual_curation CDS 957130 957178 . + 1 Parent=GSCOCT00024598001 | |
| 32599 chr10 manual_curation CDS 957276 957402 . + 2 Parent=GSCOCT00024598001 | |
| 32600 chr10 manual_curation CDS 957537 957548 . + 0 Parent=GSCOCT00024598001 | |
| 32601 chr10 manual_curation gene 957647 959859 . + . ID=GSCOCG00024599001;Name=Cc10_g01290 | |
| 32602 chr10 manual_curation mRNA 957647 959859 . + . ID=GSCOCT00024599001;Parent=GSCOCG00024599001;Name=Cc10_g01290 | |
| 32603 chr10 manual_curation polypeptide 957647 959282 . + . ID=GSCOCP00024599001;Dbxref=InterPro:IPR002930,InterPro:IPR011053,PFAM:PF01597,SUPERFAMILY:SSF51230,TAIR:AT1G75980.1,TrEMBL:B9GQR0,TrEMBL:B9R8E3,TrEMBL:F6GZT5;Derives_from=GSCOCT00024599001;Name=Cc10_g01290;Ontology_term=CC_evidence_code:ISS,GO:0005739,GO:0005960,GO:0006546,CC_EC_number:missing_EC_number,PRODUCT:Single hybrid motif superfamily protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024599001~ Single hybrid motif superfamily protein~ unknown_gene~ fragment;original_location=join(957647..957661%2C958122..958192%2C958289..958361%2C959169..959282);owner=coffea | |
| 32604 chr10 manual_curation exon 957647 957661 . + . Parent=GSCOCT00024599001 | |
| 32605 chr10 manual_curation exon 958122 958192 . + . Parent=GSCOCT00024599001 | |
| 32606 chr10 manual_curation exon 958289 958361 . + . Parent=GSCOCT00024599001 | |
| 32607 chr10 manual_curation exon 959169 959859 . + . Parent=GSCOCT00024599001 | |
| 32608 chr10 manual_curation CDS 957647 957661 . + 0 Parent=GSCOCT00024599001 | |
| 32609 chr10 manual_curation CDS 958122 958192 . + 0 Parent=GSCOCT00024599001 | |
| 32610 chr10 manual_curation CDS 958289 958361 . + 2 Parent=GSCOCT00024599001 | |
| 32611 chr10 manual_curation CDS 959169 959282 . + 0 Parent=GSCOCT00024599001 | |
| 32612 chr10 manual_curation gene 959951 960973 . - . ID=GSCOCG00024600001;Name=Cc10_g01300 | |
| 32613 chr10 manual_curation mRNA 959951 960973 . - . ID=GSCOCT00024600001;Parent=GSCOCG00024600001;Name=Cc10_g01300 | |
| 32614 chr10 manual_curation polypeptide 959951 960973 . - . ID=GSCOCP00024600001;Dbxref=InterPro:IPR007749,PFAM:PF05055,SwissProt:A2XCJ1,SwissProt:Q6DYE5,SwissProt:Q9SMU4,TAIR:AT1G20180.1,TAIR:AT3G19330.1,TAIR:AT3G49070.1,TrEMBL:B9GQR1,TrEMBL:B9H519,TrEMBL:E0CQJ4;Derives_from=GSCOCT00024600001;Name=Cc10_g01300;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative UPF0496 protein At1g20180,CC_functional_completeness:complete,CC_gene:At1g20180,CC_gene:At3g49070,CC_gene:OsI_009784;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024600001~ Putative UPF0496 protein At1g20180~ At1g20180~ complete;original_location=complement(959951..960973);owner=coffea | |
| 32615 chr10 manual_curation exon 959951 960973 . - . Parent=GSCOCT00024600001 | |
| 32616 chr10 manual_curation CDS 959951 960973 . - 0 Parent=GSCOCT00024600001 | |
| 32617 chr10 manual_curation gene 963779 966538 . - . ID=GSCOCG00024601001;Name=Cc10_g01310 | |
| 32618 chr10 manual_curation mRNA 963779 966538 . - . ID=GSCOCT00024601001;Parent=GSCOCG00024601001;Name=Cc10_g01310 | |
| 32619 chr10 manual_curation polypeptide 963971 966387 . - . ID=GSCOCP00024601001;Dbxref=InterPro:IPR002085,InterPro:IPR002328,InterPro:IPR011032,InterPro:IPR013149,InterPro:IPR013154,InterPro:IPR020843,PANTHER:PTHR11695,PFAM:PF00107,PFAM:PF08240,PROSITE:PS00059,SMART:SM00829,SUPERFAMILY:SSF50129,SwissProt:P42734,SwissProt:Q7XWU3,SwissProt:Q9ZRF1,TAIR:AT2G21730.1,TAIR:AT2G21890.1,TAIR:AT4G39330.1,TrEMBL:B9R8D9,TrEMBL:C9E0G2,TrEMBL:E0CQB7;Derives_from=GSCOCT00024601001;Name=Cc10_g01310;Ontology_term=CC_evidence_code:ISS,GO:0008270,GO:0016491,GO:0055114,CC_EC_number:1.1.1.255,PRODUCT:Probable cinnamyl alcohol dehydrogenase 6,CC_functional_completeness:complete,CC_gene:CAD6,CC_gene:CAD9,CC_gene:CAD;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024601001~ Probable cinnamyl alcohol dehydrogenase 6~ CAD6~ complete;original_location=complement(join(966293..966387%2C965898..966011%2C965580..965807%2C965075..965369%2C964382..964535%2C963971..964176));owner=coffea | |
| 32620 chr10 manual_curation exon 963779 964176 . - . Parent=GSCOCT00024601001 | |
| 32621 chr10 manual_curation exon 964382 964535 . - . Parent=GSCOCT00024601001 | |
| 32622 chr10 manual_curation exon 965075 965369 . - . Parent=GSCOCT00024601001 | |
| 32623 chr10 manual_curation exon 965580 965807 . - . Parent=GSCOCT00024601001 | |
| 32624 chr10 manual_curation exon 965898 966011 . - . Parent=GSCOCT00024601001 | |
| 32625 chr10 manual_curation exon 966293 966538 . - . Parent=GSCOCT00024601001 | |
| 32626 chr10 manual_curation CDS 963971 964176 . - 1 Parent=GSCOCT00024601001 | |
| 32627 chr10 manual_curation CDS 964382 964535 . - 0 Parent=GSCOCT00024601001 | |
| 32628 chr10 manual_curation CDS 965075 965369 . - 2 Parent=GSCOCT00024601001 | |
| 32629 chr10 manual_curation CDS 965580 965807 . - 2 Parent=GSCOCT00024601001 | |
| 32630 chr10 manual_curation CDS 965898 966011 . - 2 Parent=GSCOCT00024601001 | |
| 32631 chr10 manual_curation CDS 966293 966387 . - 0 Parent=GSCOCT00024601001 | |
| 32632 chr10 manual_curation gene 970518 975433 . + . ID=GSCOCG00024602001;Name=Cc10_g01320 | |
| 32633 chr10 manual_curation mRNA 970518 975433 . + . ID=GSCOCT00024602001;Parent=GSCOCG00024602001;Name=Cc10_g01320 | |
| 32634 chr10 manual_curation polypeptide 970598 974408 . + . ID=GSCOCP00024602001;Dbxref=GENE3D:G3DSA:1.10.10.10,InterPro:IPR002344,InterPro:IPR006630,InterPro:IPR011991,PFAM:PF05383,PRINTS:PR00302,PROFILE:PS50961,SMART:SM00715,SwissProt:Q659C4,SwissProt:Q6PKG0,SwissProt:Q6ZQ58,TAIR:AT4G35890.1,TAIR:AT5G66100.1,TrEMBL:E6NTY6,TrEMBL:F6GZT4,TrEMBL:I1MY51;Derives_from=GSCOCT00024602001;Name=Cc10_g01320;Ontology_term=CC_evidence_code:ISS,GO:0003723,GO:0005634,GO:0006396,GO:0030529,CC_EC_number:missing_EC_number,PRODUCT:Putative winged-helix DNA-binding transcription factor family protein,CC_functional_completeness:fragment,CC_gene:Larp1,CC_gene:LARP1,CC_gene:LARP1B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024602001~ Putative winged-helix DNA-binding transcription factor family protein~ Larp1~ fragment;original_location=join(970598..971029%2C971267..971804%2C971876..972032%2C972141..972231%2C973708..973779%2C974115..974408);owner=coffea | |
| 32635 chr10 manual_curation exon 970518 971029 . + . Parent=GSCOCT00024602001 | |
| 32636 chr10 manual_curation exon 971267 971804 . + . Parent=GSCOCT00024602001 | |
| 32637 chr10 manual_curation exon 971876 972032 . + . Parent=GSCOCT00024602001 | |
| 32638 chr10 manual_curation exon 972141 972231 . + . Parent=GSCOCT00024602001 | |
| 32639 chr10 manual_curation exon 973708 973779 . + . Parent=GSCOCT00024602001 | |
| 32640 chr10 manual_curation exon 974115 975433 . + . Parent=GSCOCT00024602001 | |
| 32641 chr10 manual_curation CDS 970598 971029 . + 0 Parent=GSCOCT00024602001 | |
| 32642 chr10 manual_curation CDS 971267 971804 . + 0 Parent=GSCOCT00024602001 | |
| 32643 chr10 manual_curation CDS 971876 972032 . + 1 Parent=GSCOCT00024602001 | |
| 32644 chr10 manual_curation CDS 972141 972231 . + 2 Parent=GSCOCT00024602001 | |
| 32645 chr10 manual_curation CDS 973708 973779 . + 0 Parent=GSCOCT00024602001 | |
| 32646 chr10 manual_curation CDS 974115 974408 . + 0 Parent=GSCOCT00024602001 | |
| 32647 chr10 manual_curation gene 979355 981099 . + . ID=GSCOCG00024604001;Name=Cc10_g01330 | |
| 32648 chr10 manual_curation mRNA 979355 981099 . + . ID=GSCOCT00024604001;Parent=GSCOCG00024604001;Name=Cc10_g01330 | |
| 32649 chr10 manual_curation polypeptide 979642 980807 . + . ID=GSCOCP00024604001;Dbxref=InterPro:IPR004827,InterPro:IPR011616,PFAM:PF00170,PROSITE:PS00036,SMART:SM00338,SwissProt:Q84JK2,SwissProt:Q9C5Q2,SwissProt:Q9LES3,TAIR:AT2G17770.2,TAIR:AT3G56850.1,TAIR:AT4G35900.1,TrEMBL:B9GQR3,TrEMBL:B9H516,TrEMBL:D7MBR6;Derives_from=GSCOCT00024604001;Name=Cc10_g01330;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0043565,GO:0046983,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein FD,CC_functional_completeness:fragment,CC_gene:FD,CC_gene:DPBF3,CC_gene:DPBF4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024604001~ Putative Protein FD~ FD~ fragment;original_location=join(979642..980127%2C980709..980807);owner=coffea | |
| 32650 chr10 manual_curation exon 979355 980127 . + . Parent=GSCOCT00024604001 | |
| 32651 chr10 manual_curation exon 980709 981099 . + . Parent=GSCOCT00024604001 | |
| 32652 chr10 manual_curation CDS 979642 980127 . + 0 Parent=GSCOCT00024604001 | |
| 32653 chr10 manual_curation CDS 980709 980807 . + 0 Parent=GSCOCT00024604001 | |
| 32654 chr10 manual_curation gene 997226 998382 . + . ID=GSCOCG00024605001;Name=Cc10_g01340 | |
| 32655 chr10 manual_curation mRNA 997226 998382 . + . ID=GSCOCT00024605001;Parent=GSCOCG00024605001;Name=Cc10_g01340 | |
| 32656 chr10 manual_curation polypeptide 997733 998137 . + . ID=GSCOCP00024605001;Dbxref=TAIR:AT4G22000.1,TrEMBL:B9I5C7,TrEMBL:I1K3I2,TrEMBL:I1KRX4;Derives_from=GSCOCT00024605001;Name=Cc10_g01340;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B Has 30201 Blast hits to 17322 proteins in 780 species,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024605001~ unknown protein%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ unknown_gene~ complete;original_location=997733..998137;owner=coffea | |
| 32657 chr10 manual_curation exon 997226 998382 . + . Parent=GSCOCT00024605001 | |
| 32658 chr10 manual_curation CDS 997733 998137 . + 0 Parent=GSCOCT00024605001 | |
| 32659 chr10 manual_curation gene 1000586 1004212 . + . ID=GSCOCG00024606001;Name=Cc10_g01350 | |
| 32660 chr10 manual_curation mRNA 1000586 1004212 . + . ID=GSCOCT00024606001;Parent=GSCOCG00024606001;Name=Cc10_g01350 | |
| 32661 chr10 manual_curation polypeptide 1000619 1003994 . + . ID=GSCOCP00024606001;Dbxref=GENE3D:G3DSA:3.40.50.200,InterPro:IPR000209,InterPro:IPR003137,InterPro:IPR009020,InterPro:IPR010259,InterPro:IPR015500,InterPro:IPR022398,PANTHER:PTHR10795,PFAM:PF00082,PFAM:PF02225,PFAM:PF05922,PRINTS:PR00723,PROSITE:PS00138,SUPERFAMILY:SSF52743,SUPERFAMILY:SSF54897,SwissProt:O65351,SwissProt:Q39547,SwissProt:Q9LLL8,TAIR:AT1G20150.1,TAIR:AT1G20160.1,TAIR:AT5G67360.1,TrEMBL:E0CQB3,TrEMBL:E6NTY7,TrEMBL:Q9LNU1;Derives_from=GSCOCT00024606001;Name=Cc10_g01350;Ontology_term=CC_evidence_code:ISS,GO:0004252,GO:0006508,GO:0042802,GO:0043086,CC_EC_number:3.4.21.25,PRODUCT:Putative Subtilisin-like protease,CC_functional_completeness:complete,CC_gene:ARA12,CC_gene:XSP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024606001~ Putative Subtilisin-like protease~ ARA12~ complete;original_location=join(1000619..1000797%2C1001043..1001299%2C1001384..1001495%2C1001752..1002265%2C1002405..1002505%2C1002590..1002832%2C1002931..1003045%2C1003141..1003354%2C1003441..1003994);owner=coffea | |
| 32662 chr10 manual_curation exon 1000586 1000797 . + . Parent=GSCOCT00024606001 | |
| 32663 chr10 manual_curation exon 1001043 1001299 . + . Parent=GSCOCT00024606001 | |
| 32664 chr10 manual_curation exon 1001384 1001495 . + . Parent=GSCOCT00024606001 | |
| 32665 chr10 manual_curation exon 1001752 1002265 . + . Parent=GSCOCT00024606001 | |
| 32666 chr10 manual_curation exon 1002405 1002505 . + . Parent=GSCOCT00024606001 | |
| 32667 chr10 manual_curation exon 1002590 1002832 . + . Parent=GSCOCT00024606001 | |
| 32668 chr10 manual_curation exon 1002931 1003045 . + . Parent=GSCOCT00024606001 | |
| 32669 chr10 manual_curation exon 1003141 1003354 . + . Parent=GSCOCT00024606001 | |
| 32670 chr10 manual_curation exon 1003441 1004212 . + . Parent=GSCOCT00024606001 | |
| 32671 chr10 manual_curation CDS 1000619 1000797 . + 0 Parent=GSCOCT00024606001 | |
| 32672 chr10 manual_curation CDS 1001043 1001299 . + 2 Parent=GSCOCT00024606001 | |
| 32673 chr10 manual_curation CDS 1001384 1001495 . + 1 Parent=GSCOCT00024606001 | |
| 32674 chr10 manual_curation CDS 1001752 1002265 . + 2 Parent=GSCOCT00024606001 | |
| 32675 chr10 manual_curation CDS 1002405 1002505 . + 0 Parent=GSCOCT00024606001 | |
| 32676 chr10 manual_curation CDS 1002590 1002832 . + 2 Parent=GSCOCT00024606001 | |
| 32677 chr10 manual_curation CDS 1002931 1003045 . + 2 Parent=GSCOCT00024606001 | |
| 32678 chr10 manual_curation CDS 1003141 1003354 . + 0 Parent=GSCOCT00024606001 | |
| 32679 chr10 manual_curation CDS 1003441 1003994 . + 1 Parent=GSCOCT00024606001 | |
| 32680 chr10 manual_curation gene 1005875 1008447 . - . ID=GSCOCG00024607001;Name=Cc10_g01360 | |
| 32681 chr10 manual_curation mRNA 1005875 1008447 . - . ID=GSCOCT00024607001;Parent=GSCOCG00024607001;Name=Cc10_g01360 | |
| 32682 chr10 manual_curation polypeptide 1006252 1008328 . - . ID=GSCOCP00024607001;Dbxref=TAIR:AT1G11320.1,TrEMBL:B9R8D2,TrEMBL:E0CQB1,TrEMBL:E6NTZ0;Derives_from=GSCOCT00024607001;Name=Cc10_g01360;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024607001~ Putative unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: mitochondrion%2C plastid%3B EXPRESSED IN: 7 plant structures%3B EXPRESSED DURING: C globular stage%2C F mature embryo stage%2C petal differentiation and expansion stage%2C E expanded cotyledon stage%2C D bilateral stage%3B Has 46 Blast hits to 46 proteins in 14 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 0%3B Fungi - 0%3B Plants - 44%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(1008215..1008328%2C1007181..1007639%2C1006252..1006950));owner=coffea | |
| 32683 chr10 manual_curation exon 1005875 1006950 . - . Parent=GSCOCT00024607001 | |
| 32684 chr10 manual_curation exon 1007181 1007639 . - . Parent=GSCOCT00024607001 | |
| 32685 chr10 manual_curation exon 1008215 1008447 . - . Parent=GSCOCT00024607001 | |
| 32686 chr10 manual_curation CDS 1006252 1006950 . - 0 Parent=GSCOCT00024607001 | |
| 32687 chr10 manual_curation CDS 1007181 1007639 . - 0 Parent=GSCOCT00024607001 | |
| 32688 chr10 manual_curation CDS 1008215 1008328 . - 0 Parent=GSCOCT00024607001 | |
| 32689 chr10 manual_curation gene 1011426 1013923 . - . ID=GSCOCG00024608001;Name=Cc10_g01370 | |
| 32690 chr10 manual_curation mRNA 1011426 1013923 . - . ID=GSCOCT00024608001;Parent=GSCOCG00024608001;Name=Cc10_g01370 | |
| 32691 chr10 manual_curation polypeptide 1011426 1013923 . - . ID=GSCOCP00024608001;Dbxref=InterPro:IPR001087,InterPro:IPR008265,InterPro:IPR013830,PFAM:PF00657,PROSITE:PS01098,SUPERFAMILY:SSF52266,SwissProt:Q94CH6,SwissProt:Q94CH7,SwissProt:Q94CH8,TAIR:AT1G75880.1,TAIR:AT1G75890.1,TAIR:AT1G75900.1,TrEMBL:B9GQR7,TrEMBL:B9H511,TrEMBL:F6GZS8;Derives_from=GSCOCT00024608001;Name=Cc10_g01370;Ontology_term=CC_evidence_code:ISS,GO:0006629,GO:0016298,CC_EC_number:missing_EC_number,PRODUCT:Putative GDSL esterase/lipase EXL3,CC_functional_completeness:complete,CC_gene:EXL3,CC_gene:EXL1,CC_gene:EXL2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024608001~ Putative GDSL esterase/lipase EXL3~ EXL3~ complete;original_location=complement(join(1013795..1013923%2C1013702..1013712%2C1012787..1012968%2C1012545..1012675%2C1012216..1012449%2C1011676..1011958%2C1011426..1011559));owner=coffea | |
| 32692 chr10 manual_curation exon 1011426 1011559 . - . Parent=GSCOCT00024608001 | |
| 32693 chr10 manual_curation exon 1011676 1011958 . - . Parent=GSCOCT00024608001 | |
| 32694 chr10 manual_curation exon 1012216 1012449 . - . Parent=GSCOCT00024608001 | |
| 32695 chr10 manual_curation exon 1012545 1012675 . - . Parent=GSCOCT00024608001 | |
| 32696 chr10 manual_curation exon 1012787 1012968 . - . Parent=GSCOCT00024608001 | |
| 32697 chr10 manual_curation exon 1013702 1013712 . - . Parent=GSCOCT00024608001 | |
| 32698 chr10 manual_curation exon 1013795 1013923 . - . Parent=GSCOCT00024608001 | |
| 32699 chr10 manual_curation CDS 1011426 1011559 . - 1 Parent=GSCOCT00024608001 | |
| 32700 chr10 manual_curation CDS 1011676 1011958 . - 0 Parent=GSCOCT00024608001 | |
| 32701 chr10 manual_curation CDS 1012216 1012449 . - 0 Parent=GSCOCT00024608001 | |
| 32702 chr10 manual_curation CDS 1012545 1012675 . - 1 Parent=GSCOCT00024608001 | |
| 32703 chr10 manual_curation CDS 1012787 1012968 . - 2 Parent=GSCOCT00024608001 | |
| 32704 chr10 manual_curation CDS 1013702 1013712 . - 0 Parent=GSCOCT00024608001 | |
| 32705 chr10 manual_curation CDS 1013795 1013923 . - 0 Parent=GSCOCT00024608001 | |
| 32706 chr10 manual_curation gene 1014174 1016978 . - . ID=GSCOCG00024609001;Name=Cc10_g01380 | |
| 32707 chr10 manual_curation mRNA 1014174 1016978 . - . ID=GSCOCT00024609001;Parent=GSCOCG00024609001;Name=Cc10_g01380 | |
| 32708 chr10 manual_curation polypeptide 1014174 1016978 . - . ID=GSCOCP00024609001;Dbxref=InterPro:IPR001087,PFAM:PF00657,SwissProt:Q94CH6,SwissProt:Q94CH7,SwissProt:Q94CH8,TAIR:AT1G75880.1,TAIR:AT1G75890.1,TAIR:AT1G75900.1,TrEMBL:B9GQR7,TrEMBL:B9H511,TrEMBL:F6GZS8;Derives_from=GSCOCT00024609001;Name=Cc10_g01380;Ontology_term=CC_evidence_code:ISS,GO:0006629,CC_EC_number:missing_EC_number,PRODUCT:GDSL esterase/lipase EXL3,CC_functional_completeness:complete,CC_gene:EXL3,CC_gene:EXL1,CC_gene:EXL2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024609001~ GDSL esterase/lipase EXL3~ EXL3~ complete;original_location=complement(join(1016672..1016978%2C1015449..1015579%2C1014869..1015102%2C1014508..1014763%2C1014174..1014364));owner=coffea | |
| 32709 chr10 manual_curation exon 1014174 1014364 . - . Parent=GSCOCT00024609001 | |
| 32710 chr10 manual_curation exon 1014508 1014763 . - . Parent=GSCOCT00024609001 | |
| 32711 chr10 manual_curation exon 1014869 1015102 . - . Parent=GSCOCT00024609001 | |
| 32712 chr10 manual_curation exon 1015449 1015579 . - . Parent=GSCOCT00024609001 | |
| 32713 chr10 manual_curation exon 1016672 1016978 . - . Parent=GSCOCT00024609001 | |
| 32714 chr10 manual_curation CDS 1014174 1014364 . - 1 Parent=GSCOCT00024609001 | |
| 32715 chr10 manual_curation CDS 1014508 1014763 . - 0 Parent=GSCOCT00024609001 | |
| 32716 chr10 manual_curation CDS 1014869 1015102 . - 0 Parent=GSCOCT00024609001 | |
| 32717 chr10 manual_curation CDS 1015449 1015579 . - 1 Parent=GSCOCT00024609001 | |
| 32718 chr10 manual_curation CDS 1016672 1016978 . - 0 Parent=GSCOCT00024609001 | |
| 32719 chr10 manual_curation gene 1020313 1028071 . - . ID=GSCOCG00024610001;Name=Cc10_g01390 | |
| 32720 chr10 manual_curation mRNA 1020313 1028071 . - . ID=GSCOCT00024610001;Parent=GSCOCG00024610001;Name=Cc10_g01390 | |
| 32721 chr10 manual_curation polypeptide 1020619 1028071 . - . ID=GSCOCP00024610001;Dbxref=InterPro:IPR000306,InterPro:IPR011011,InterPro:IPR013625,InterPro:IPR017455,PFAM:PF01363,PFAM:PF08416,PROFILE:PS50178,SMART:SM00064,SUPERFAMILY:SSF57903,SwissProt:A8XJZ8,SwissProt:B4M140,SwissProt:Q9TZD0,TAIR:AT1G20110.1,TAIR:AT1G61690.1,TrEMBL:B9R8C9,TrEMBL:E6NTZ2,TrEMBL:F6GZS4;Derives_from=GSCOCT00024610001;Name=Cc10_g01390;Ontology_term=CC_evidence_code:ISS,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:RING/FYVE/PHD zinc finger superfamily protein,CC_functional_completeness:complete,CC_gene:lst-2,CC_gene:GJ23073;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024610001~ RING/FYVE/PHD zinc finger superfamily protein~ lst-2~ complete;original_location=complement(join(1027109..1028071%2C1026246..1026332%2C1024995..1025126%2C1023420..1023551%2C1022424..1022489%2C1022187..1022297%2C1021823..1021915%2C1020955..1020988%2C1020792..1020862%2C1020619..1020696));owner=coffea | |
| 32722 chr10 manual_curation exon 1020313 1020696 . - . Parent=GSCOCT00024610001 | |
| 32723 chr10 manual_curation exon 1020792 1020862 . - . Parent=GSCOCT00024610001 | |
| 32724 chr10 manual_curation exon 1020955 1020988 . - . Parent=GSCOCT00024610001 | |
| 32725 chr10 manual_curation exon 1021823 1021915 . - . Parent=GSCOCT00024610001 | |
| 32726 chr10 manual_curation exon 1022187 1022297 . - . Parent=GSCOCT00024610001 | |
| 32727 chr10 manual_curation exon 1022424 1022489 . - . Parent=GSCOCT00024610001 | |
| 32728 chr10 manual_curation exon 1023420 1023551 . - . Parent=GSCOCT00024610001 | |
| 32729 chr10 manual_curation exon 1024995 1025126 . - . Parent=GSCOCT00024610001 | |
| 32730 chr10 manual_curation exon 1026246 1026332 . - . Parent=GSCOCT00024610001 | |
| 32731 chr10 manual_curation exon 1027109 1028071 . - . Parent=GSCOCT00024610001 | |
| 32732 chr10 manual_curation CDS 1020619 1020696 . - 0 Parent=GSCOCT00024610001 | |
| 32733 chr10 manual_curation CDS 1020792 1020862 . - 1 Parent=GSCOCT00024610001 | |
| 32734 chr10 manual_curation CDS 1020955 1020988 . - 0 Parent=GSCOCT00024610001 | |
| 32735 chr10 manual_curation CDS 1021823 1021915 . - 0 Parent=GSCOCT00024610001 | |
| 32736 chr10 manual_curation CDS 1022187 1022297 . - 0 Parent=GSCOCT00024610001 | |
| 32737 chr10 manual_curation CDS 1022424 1022489 . - 0 Parent=GSCOCT00024610001 | |
| 32738 chr10 manual_curation CDS 1023420 1023551 . - 0 Parent=GSCOCT00024610001 | |
| 32739 chr10 manual_curation CDS 1024995 1025126 . - 0 Parent=GSCOCT00024610001 | |
| 32740 chr10 manual_curation CDS 1026246 1026332 . - 0 Parent=GSCOCT00024610001 | |
| 32741 chr10 manual_curation CDS 1027109 1028071 . - 0 Parent=GSCOCT00024610001 | |
| 32742 chr10 manual_curation gene 1032888 1033862 . - . ID=GSCOCG00024611001;Name=Cc10_g01400 | |
| 32743 chr10 manual_curation mRNA 1032888 1033862 . - . ID=GSCOCT00024611001;Parent=GSCOCG00024611001;Name=Cc10_g01400 | |
| 32744 chr10 manual_curation polypeptide 1032888 1033862 . - . ID=GSCOCP00024611001;Dbxref=InterPro:IPR001841,PROFILE:PS50089,TAIR:AT1G45976.1,TAIR:AT4G35070.1,TAIR:AT5G47050.1,TrEMBL:A5B1D9,TrEMBL:B9R8C8,TrEMBL:F6GZS3;Derives_from=GSCOCT00024611001;Name=Cc10_g01400;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024611001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=complement(join(1033620..1033862%2C1032888..1033364));owner=coffea | |
| 32745 chr10 manual_curation exon 1032888 1033364 . - . Parent=GSCOCT00024611001 | |
| 32746 chr10 manual_curation exon 1033620 1033862 . - . Parent=GSCOCT00024611001 | |
| 32747 chr10 manual_curation CDS 1032888 1033364 . - 0 Parent=GSCOCT00024611001 | |
| 32748 chr10 manual_curation CDS 1033620 1033862 . - 0 Parent=GSCOCT00024611001 | |
| 32749 chr10 manual_curation gene 1035649 1038689 . - . ID=GSCOCG00024612001;Name=Cc10_g01410 | |
| 32750 chr10 manual_curation mRNA 1035649 1038689 . - . ID=GSCOCT00024612001;Parent=GSCOCG00024612001;Name=Cc10_g01410 | |
| 32751 chr10 manual_curation polypeptide 1036132 1038589 . - . ID=GSCOCP00024612001;Dbxref=GENE3D:G3DSA:3.40.30.10,InterPro:IPR002109,InterPro:IPR004046,InterPro:IPR010987,InterPro:IPR011767,InterPro:IPR012335,InterPro:IPR012336,PFAM:PF00043,PFAM:PF00462,PROFILE:PS51354,PROSITE:PS00195,SUPERFAMILY:SSF47616,SUPERFAMILY:SSF52833,SwissProt:Q7ZUC7,SwissProt:Q8BWM0,SwissProt:Q9N0A4,TAIR:AT5G42150.1,TrEMBL:B9H508,TrEMBL:D7SJB8,TrEMBL:E6NTZ4;Derives_from=GSCOCT00024612001;Name=Cc10_g01410;Ontology_term=CC_evidence_code:ISS,GO:0009055,GO:0015035,GO:0045454,CC_EC_number:5.3.99.3,PRODUCT:Glutathione S-transferase family protein,CC_functional_completeness:complete,CC_gene:ptges2,CC_gene:Ptges2,CC_gene:PTGES2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024612001~ Glutathione S-transferase family protein~ ptges2~ complete;original_location=complement(join(1038253..1038589%2C1037337..1037471%2C1037133..1037223%2C1036815..1036909%2C1036392..1036559%2C1036132..1036301));owner=coffea | |
| 32752 chr10 manual_curation exon 1035649 1036301 . - . Parent=GSCOCT00024612001 | |
| 32753 chr10 manual_curation exon 1036392 1036559 . - . Parent=GSCOCT00024612001 | |
| 32754 chr10 manual_curation exon 1036815 1036909 . - . Parent=GSCOCT00024612001 | |
| 32755 chr10 manual_curation exon 1037133 1037223 . - . Parent=GSCOCT00024612001 | |
| 32756 chr10 manual_curation exon 1037337 1037471 . - . Parent=GSCOCT00024612001 | |
| 32757 chr10 manual_curation exon 1038253 1038689 . - . Parent=GSCOCT00024612001 | |
| 32758 chr10 manual_curation CDS 1036132 1036301 . - 1 Parent=GSCOCT00024612001 | |
| 32759 chr10 manual_curation CDS 1036392 1036559 . - 1 Parent=GSCOCT00024612001 | |
| 32760 chr10 manual_curation CDS 1036815 1036909 . - 2 Parent=GSCOCT00024612001 | |
| 32761 chr10 manual_curation CDS 1037133 1037223 . - 1 Parent=GSCOCT00024612001 | |
| 32762 chr10 manual_curation CDS 1037337 1037471 . - 1 Parent=GSCOCT00024612001 | |
| 32763 chr10 manual_curation CDS 1038253 1038589 . - 0 Parent=GSCOCT00024612001 | |
| 32764 chr10 manual_curation gene 1042754 1046193 . + . ID=GSCOCG00024613001;Name=Cc10_g01420 | |
| 32765 chr10 manual_curation mRNA 1042754 1046193 . + . ID=GSCOCT00024613001;Parent=GSCOCG00024613001;Name=Cc10_g01420 | |
| 32766 chr10 manual_curation polypeptide 1042979 1045939 . + . ID=GSCOCP00024613001;Dbxref=TAIR:AT1G20100.1,TAIR:AT1G75860.1,TAIR:AT2G17787.1,TrEMBL:B9R8C6,TrEMBL:E6NTZ5,TrEMBL:F6GWK1;Derives_from=GSCOCT00024613001;Name=Cc10_g01420;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024613001~ Putative unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G20100.1)%3B Has 258 Blast hits to 235 proteins in 58 species: Archae - 0%3B Bacteria - 4%3B Metazoa - 59%3B Fungi - 16%3B Plants - 90%3B Viruses - 0%3B Other Eukaryotes - 89 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(1042979..1043059%2C1044945..1045281%2C1045398..1045939);owner=coffea | |
| 32767 chr10 manual_curation exon 1042754 1043059 . + . Parent=GSCOCT00024613001 | |
| 32768 chr10 manual_curation exon 1044945 1045281 . + . Parent=GSCOCT00024613001 | |
| 32769 chr10 manual_curation exon 1045398 1046193 . + . Parent=GSCOCT00024613001 | |
| 32770 chr10 manual_curation CDS 1042979 1043059 . + 0 Parent=GSCOCT00024613001 | |
| 32771 chr10 manual_curation CDS 1044945 1045281 . + 0 Parent=GSCOCT00024613001 | |
| 32772 chr10 manual_curation CDS 1045398 1045939 . + 1 Parent=GSCOCT00024613001 | |
| 32773 chr10 manual_curation gene 1046863 1056689 . + . ID=GSCOCG00024614001;Name=Cc10_g01430 | |
| 32774 chr10 manual_curation mRNA 1046863 1056689 . + . ID=GSCOCT00024614001;Parent=GSCOCG00024614001;Name=Cc10_g01430 | |
| 32775 chr10 manual_curation polypeptide 1046942 1056346 . + . ID=GSCOCP00024614001;Dbxref=InterPro:IPR005378,PANTHER:PTHR11099,PFAM:PF03635,SwissProt:A8R7K9,SwissProt:F4I0P8,SwissProt:Q7X659,TAIR:AT1G75850.1,TAIR:AT2G17790.1,TAIR:AT3G51310.1,TrEMBL:E6NTZ8,TrEMBL:F6H1M7,TrEMBL:I1PGD9;Derives_from=GSCOCT00024614001;Name=Cc10_g01430;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Vacuolar protein sorting-associated protein 35B,CC_functional_completeness:complete,CC_gene:VPS35B,CC_gene:VPS35A,CC_gene:VPS35C;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024614001~ Vacuolar protein sorting-associated protein 35B~ VPS35B~ complete;original_location=join(1046942..1047037%2C1047139..1047235%2C1047365..1047488%2C1048251..1048436%2C1049009..1049096%2C1049283..1049339%2C1049431..1049520%2C1049623..1049745%2C1050316..1050390%2C1050464..1050523%2C1050804..1050920%2C1051376..1051615%2C1051681..1051746%2C1052294..1052383%2C1053057..1053146%2C1053996..1054085%2C1054565..1054633%2C1055234..1055314%2C1055435..1055542%2C1055622..1055725%2C1055914..1056027%2C1056136..1056346);owner=coffea | |
| 32776 chr10 manual_curation exon 1046863 1047037 . + . Parent=GSCOCT00024614001 | |
| 32777 chr10 manual_curation exon 1047139 1047235 . + . Parent=GSCOCT00024614001 | |
| 32778 chr10 manual_curation exon 1047365 1047488 . + . Parent=GSCOCT00024614001 | |
| 32779 chr10 manual_curation exon 1048251 1048436 . + . Parent=GSCOCT00024614001 | |
| 32780 chr10 manual_curation exon 1049009 1049096 . + . Parent=GSCOCT00024614001 | |
| 32781 chr10 manual_curation exon 1049283 1049339 . + . Parent=GSCOCT00024614001 | |
| 32782 chr10 manual_curation exon 1049431 1049520 . + . Parent=GSCOCT00024614001 | |
| 32783 chr10 manual_curation exon 1049623 1049745 . + . Parent=GSCOCT00024614001 | |
| 32784 chr10 manual_curation exon 1050316 1050390 . + . Parent=GSCOCT00024614001 | |
| 32785 chr10 manual_curation exon 1050464 1050523 . + . Parent=GSCOCT00024614001 | |
| 32786 chr10 manual_curation exon 1050804 1050920 . + . Parent=GSCOCT00024614001 | |
| 32787 chr10 manual_curation exon 1051376 1051615 . + . Parent=GSCOCT00024614001 | |
| 32788 chr10 manual_curation exon 1051681 1051746 . + . Parent=GSCOCT00024614001 | |
| 32789 chr10 manual_curation exon 1052294 1052383 . + . Parent=GSCOCT00024614001 | |
| 32790 chr10 manual_curation exon 1053057 1053146 . + . Parent=GSCOCT00024614001 | |
| 32791 chr10 manual_curation exon 1053996 1054085 . + . Parent=GSCOCT00024614001 | |
| 32792 chr10 manual_curation exon 1054565 1054633 . + . Parent=GSCOCT00024614001 | |
| 32793 chr10 manual_curation exon 1055234 1055314 . + . Parent=GSCOCT00024614001 | |
| 32794 chr10 manual_curation exon 1055435 1055542 . + . Parent=GSCOCT00024614001 | |
| 32795 chr10 manual_curation exon 1055622 1055725 . + . Parent=GSCOCT00024614001 | |
| 32796 chr10 manual_curation exon 1055914 1056027 . + . Parent=GSCOCT00024614001 | |
| 32797 chr10 manual_curation exon 1056136 1056689 . + . Parent=GSCOCT00024614001 | |
| 32798 chr10 manual_curation CDS 1046942 1047037 . + 0 Parent=GSCOCT00024614001 | |
| 32799 chr10 manual_curation CDS 1047139 1047235 . + 0 Parent=GSCOCT00024614001 | |
| 32800 chr10 manual_curation CDS 1047365 1047488 . + 1 Parent=GSCOCT00024614001 | |
| 32801 chr10 manual_curation CDS 1048251 1048436 . + 2 Parent=GSCOCT00024614001 | |
| 32802 chr10 manual_curation CDS 1049009 1049096 . + 2 Parent=GSCOCT00024614001 | |
| 32803 chr10 manual_curation CDS 1049283 1049339 . + 0 Parent=GSCOCT00024614001 | |
| 32804 chr10 manual_curation CDS 1049431 1049520 . + 0 Parent=GSCOCT00024614001 | |
| 32805 chr10 manual_curation CDS 1049623 1049745 . + 0 Parent=GSCOCT00024614001 | |
| 32806 chr10 manual_curation CDS 1050316 1050390 . + 0 Parent=GSCOCT00024614001 | |
| 32807 chr10 manual_curation CDS 1050464 1050523 . + 0 Parent=GSCOCT00024614001 | |
| 32808 chr10 manual_curation CDS 1050804 1050920 . + 0 Parent=GSCOCT00024614001 | |
| 32809 chr10 manual_curation CDS 1051376 1051615 . + 0 Parent=GSCOCT00024614001 | |
| 32810 chr10 manual_curation CDS 1051681 1051746 . + 0 Parent=GSCOCT00024614001 | |
| 32811 chr10 manual_curation CDS 1052294 1052383 . + 0 Parent=GSCOCT00024614001 | |
| 32812 chr10 manual_curation CDS 1053057 1053146 . + 0 Parent=GSCOCT00024614001 | |
| 32813 chr10 manual_curation CDS 1053996 1054085 . + 0 Parent=GSCOCT00024614001 | |
| 32814 chr10 manual_curation CDS 1054565 1054633 . + 0 Parent=GSCOCT00024614001 | |
| 32815 chr10 manual_curation CDS 1055234 1055314 . + 0 Parent=GSCOCT00024614001 | |
| 32816 chr10 manual_curation CDS 1055435 1055542 . + 0 Parent=GSCOCT00024614001 | |
| 32817 chr10 manual_curation CDS 1055622 1055725 . + 0 Parent=GSCOCT00024614001 | |
| 32818 chr10 manual_curation CDS 1055914 1056027 . + 2 Parent=GSCOCT00024614001 | |
| 32819 chr10 manual_curation CDS 1056136 1056346 . + 2 Parent=GSCOCT00024614001 | |
| 32820 chr10 manual_curation gene 1058001 1064099 . - . ID=GSCOCG00024615001;Name=Cc10_g01440 | |
| 32821 chr10 manual_curation mRNA 1058001 1064099 . - . ID=GSCOCT00024615001;Parent=GSCOCG00024615001;Name=Cc10_g01440 | |
| 32822 chr10 manual_curation polypeptide 1058274 1063788 . - . ID=GSCOCP00024615001;Dbxref=InterPro:IPR001140,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR011527,InterPro:IPR017871,InterPro:IPR017940,PFAM:PF00005,PFAM:PF00664,PROFILE:PS50893,PROFILE:PS50929,PROSITE:PS00211,SMART:SM00382,SUPERFAMILY:SSF90123,SwissProt:Q9C7F2,SwissProt:Q9C7F8,SwissProt:Q9LJX0,TAIR:AT1G27940.1,TAIR:AT1G28010.1,TAIR:AT3G28860.1,TrEMBL:A5CAU4,TrEMBL:B9R8C1,TrEMBL:F6H1M6;Derives_from=GSCOCT00024615001;Name=Cc10_g01440;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0006810,GO:0016021,GO:0016887,GO:0017111,GO:0055085,CC_EC_number:3.6.3.44,CC_EC_number:3.6.3.44,PRODUCT:ABC transporter B family member 13,CC_functional_completeness:complete,CC_gene:ABCB13,CC_gene:ABCB14,CC_gene:ABCB19;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024615001~ ABC transporter B family member 13~ ABCB13~ complete;original_location=complement(join(1063501..1063788%2C1062965..1063019%2C1062692..1062867%2C1062399..1062599%2C1061765..1062024%2C1061365..1061678%2C1061037..1061260%2C1059970..1060759%2C1059652..1059893%2C1058274..1059503));owner=coffea | |
| 32823 chr10 manual_curation exon 1058001 1059503 . - . Parent=GSCOCT00024615001 | |
| 32824 chr10 manual_curation exon 1059652 1059893 . - . Parent=GSCOCT00024615001 | |
| 32825 chr10 manual_curation exon 1059970 1060759 . - . Parent=GSCOCT00024615001 | |
| 32826 chr10 manual_curation exon 1061037 1061260 . - . Parent=GSCOCT00024615001 | |
| 32827 chr10 manual_curation exon 1061365 1061678 . - . Parent=GSCOCT00024615001 | |
| 32828 chr10 manual_curation exon 1061765 1062024 . - . Parent=GSCOCT00024615001 | |
| 32829 chr10 manual_curation exon 1062399 1062599 . - . Parent=GSCOCT00024615001 | |
| 32830 chr10 manual_curation exon 1062692 1062867 . - . Parent=GSCOCT00024615001 | |
| 32831 chr10 manual_curation exon 1062965 1063019 . - . Parent=GSCOCT00024615001 | |
| 32832 chr10 manual_curation exon 1063501 1064099 . - . Parent=GSCOCT00024615001 | |
| 32833 chr10 manual_curation CDS 1058274 1059503 . - 0 Parent=GSCOCT00024615001 | |
| 32834 chr10 manual_curation CDS 1059652 1059893 . - 1 Parent=GSCOCT00024615001 | |
| 32835 chr10 manual_curation CDS 1059970 1060759 . - 0 Parent=GSCOCT00024615001 | |
| 32836 chr10 manual_curation CDS 1061037 1061260 . - 1 Parent=GSCOCT00024615001 | |
| 32837 chr10 manual_curation CDS 1061365 1061678 . - 2 Parent=GSCOCT00024615001 | |
| 32838 chr10 manual_curation CDS 1061765 1062024 . - 0 Parent=GSCOCT00024615001 | |
| 32839 chr10 manual_curation CDS 1062399 1062599 . - 0 Parent=GSCOCT00024615001 | |
| 32840 chr10 manual_curation CDS 1062692 1062867 . - 1 Parent=GSCOCT00024615001 | |
| 32841 chr10 manual_curation CDS 1062965 1063019 . - 0 Parent=GSCOCT00024615001 | |
| 32842 chr10 manual_curation CDS 1063501 1063788 . - 0 Parent=GSCOCT00024615001 | |
| 32843 chr10 manual_curation gene 1066410 1069265 . + . ID=GSCOCG00024616001;Name=Cc10_g01450 | |
| 32844 chr10 manual_curation mRNA 1066410 1069265 . + . ID=GSCOCT00024616001;Parent=GSCOCG00024616001;Name=Cc10_g01450 | |
| 32845 chr10 manual_curation polypeptide 1066637 1068663 . + . ID=GSCOCP00024616001;Dbxref=InterPro:IPR001222,PFAM:PF01096,PROFILE:PS51133,SMART:SM00440,SwissProt:Q1RMP0,SwissProt:Q5TM50,SwissProt:Q6MFY5,TAIR:AT3G25940.1,TrEMBL:B9I7D2,TrEMBL:D7LQX0,TrEMBL:Q9LU97;Derives_from=GSCOCT00024616001;Name=Cc10_g01450;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0008270,GO:0030528,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative DNA-directed RNA polymerase I subunit RPA12,CC_functional_completeness:complete,CC_gene:ZNRD1,CC_gene:Znrd1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024616001~ Putative DNA-directed RNA polymerase I subunit RPA12~ ZNRD1~ complete;original_location=join(1066637..1066751%2C1066934..1066974%2C1068250..1068318%2C1068412..1068471%2C1068586..1068663);owner=coffea | |
| 32846 chr10 manual_curation exon 1068829 1069265 . + . Parent=GSCOCT00024616001 | |
| 32847 chr10 manual_curation exon 1066410 1066751 . + . Parent=GSCOCT00024616001 | |
| 32848 chr10 manual_curation exon 1066934 1066974 . + . Parent=GSCOCT00024616001 | |
| 32849 chr10 manual_curation exon 1068250 1068318 . + . Parent=GSCOCT00024616001 | |
| 32850 chr10 manual_curation exon 1068412 1068471 . + . Parent=GSCOCT00024616001 | |
| 32851 chr10 manual_curation exon 1068586 1068695 . + . Parent=GSCOCT00024616001 | |
| 32852 chr10 manual_curation CDS 1066637 1066751 . + 0 Parent=GSCOCT00024616001 | |
| 32853 chr10 manual_curation CDS 1066934 1066974 . + 1 Parent=GSCOCT00024616001 | |
| 32854 chr10 manual_curation CDS 1068250 1068318 . + 0 Parent=GSCOCT00024616001 | |
| 32855 chr10 manual_curation CDS 1068412 1068471 . + 0 Parent=GSCOCT00024616001 | |
| 32856 chr10 manual_curation CDS 1068586 1068663 . + 0 Parent=GSCOCT00024616001 | |
| 32857 chr10 manual_curation gene 1076182 1083147 . + . ID=GSCOCG00024617001;Name=Cc10_g01460 | |
| 32858 chr10 manual_curation mRNA 1076182 1083147 . + . ID=GSCOCT00024617001;Parent=GSCOCG00024617001;Name=Cc10_g01460 | |
| 32859 chr10 manual_curation polypeptide 1076652 1082461 . + . ID=GSCOCP00024617001;Dbxref=InterPro:IPR000008,InterPro:IPR008973,InterPro:IPR018029,InterPro:IPR020477,PFAM:PF00168,PRINTS:PR00360,PROFILE:PS50004,SMART:SM00239,SUPERFAMILY:SSF49562,SwissProt:Q3U7R1,SwissProt:Q5RAG2,SwissProt:Q9BSJ8,TAIR:AT1G20080.1,TAIR:AT2G20990.3,TAIR:AT5G04220.2,TrEMBL:A5CAU2,TrEMBL:E0CQ92,TrEMBL:I1MY41;Derives_from=GSCOCT00024617001;Name=Cc10_g01460;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Extended synaptotagmin-1,CC_functional_completeness:fragment,CC_gene:ESYT1,CC_gene:Esyt1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024617001~ Putative Extended synaptotagmin-1~ ESYT1~ fragment;original_location=join(1076652..1076762%2C1077492..1077590%2C1077680..1077730%2C1077812..1077935%2C1078899..1079017%2C1079203..1079304%2C1079810..1079884%2C1080451..1080527%2C1080625..1080871%2C1081286..1081636%2C1081776..1081907%2C1082330..1082461);owner=coffea | |
| 32860 chr10 manual_curation exon 1076182 1076360 . + . Parent=GSCOCT00024617001 | |
| 32861 chr10 manual_curation exon 1076454 1076762 . + . Parent=GSCOCT00024617001 | |
| 32862 chr10 manual_curation exon 1077492 1077590 . + . Parent=GSCOCT00024617001 | |
| 32863 chr10 manual_curation exon 1077680 1077730 . + . Parent=GSCOCT00024617001 | |
| 32864 chr10 manual_curation exon 1077812 1077935 . + . Parent=GSCOCT00024617001 | |
| 32865 chr10 manual_curation exon 1078899 1079017 . + . Parent=GSCOCT00024617001 | |
| 32866 chr10 manual_curation exon 1079203 1079304 . + . Parent=GSCOCT00024617001 | |
| 32867 chr10 manual_curation exon 1079810 1079884 . + . Parent=GSCOCT00024617001 | |
| 32868 chr10 manual_curation exon 1080451 1080527 . + . Parent=GSCOCT00024617001 | |
| 32869 chr10 manual_curation exon 1080625 1080871 . + . Parent=GSCOCT00024617001 | |
| 32870 chr10 manual_curation exon 1081286 1081636 . + . Parent=GSCOCT00024617001 | |
| 32871 chr10 manual_curation exon 1081776 1081907 . + . Parent=GSCOCT00024617001 | |
| 32872 chr10 manual_curation exon 1082330 1083147 . + . Parent=GSCOCT00024617001 | |
| 32873 chr10 manual_curation CDS 1076652 1076762 . + 0 Parent=GSCOCT00024617001 | |
| 32874 chr10 manual_curation CDS 1077492 1077590 . + 0 Parent=GSCOCT00024617001 | |
| 32875 chr10 manual_curation CDS 1077680 1077730 . + 0 Parent=GSCOCT00024617001 | |
| 32876 chr10 manual_curation CDS 1077812 1077935 . + 0 Parent=GSCOCT00024617001 | |
| 32877 chr10 manual_curation CDS 1078899 1079017 . + 1 Parent=GSCOCT00024617001 | |
| 32878 chr10 manual_curation CDS 1079203 1079304 . + 0 Parent=GSCOCT00024617001 | |
| 32879 chr10 manual_curation CDS 1079810 1079884 . + 0 Parent=GSCOCT00024617001 | |
| 32880 chr10 manual_curation CDS 1080451 1080527 . + 0 Parent=GSCOCT00024617001 | |
| 32881 chr10 manual_curation CDS 1080625 1080871 . + 2 Parent=GSCOCT00024617001 | |
| 32882 chr10 manual_curation CDS 1081286 1081636 . + 0 Parent=GSCOCT00024617001 | |
| 32883 chr10 manual_curation CDS 1081776 1081907 . + 0 Parent=GSCOCT00024617001 | |
| 32884 chr10 manual_curation CDS 1082330 1082461 . + 0 Parent=GSCOCT00024617001 | |
| 32885 chr10 manual_curation gene 1089710 1092893 . + . ID=GSCOCG00024618001;Name=Cc10_g01470 | |
| 32886 chr10 manual_curation mRNA 1089710 1092893 . + . ID=GSCOCT00024618001;Parent=GSCOCG00024618001;Name=Cc10_g01470 | |
| 32887 chr10 manual_curation polypeptide 1090419 1092893 . + . ID=GSCOCP00024618001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PROFILE:PS50011,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:O49545,SwissProt:Q9M2Z1,SwissProt:Q9SYQ8,TAIR:AT1G75820.1,TAIR:AT3G49670.1,TAIR:AT5G65700.1,TrEMBL:B9GQS8,TrEMBL:B9R8B4,TrEMBL:F6H1M3;Derives_from=GSCOCT00024618001;Name=Cc10_g01470;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Receptor protein kinase CLAVATA1,CC_functional_completeness:complete,CC_gene:CLV1,CC_gene:BAM2,CC_gene:BAM1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024618001~ Receptor protein kinase CLAVATA1~ CLV1~ complete;original_location=1090419..1092893;owner=coffea | |
| 32888 chr10 manual_curation exon 1089710 1092893 . + . Parent=GSCOCT00024618001 | |
| 32889 chr10 manual_curation CDS 1090419 1092893 . + 0 Parent=GSCOCT00024618001 | |
| 32890 chr10 manual_curation gene 1093043 1093743 . + . ID=GSCOCG00024619001;Name=Cc10_g01480 | |
| 32891 chr10 manual_curation mRNA 1093043 1093743 . + . ID=GSCOCT00024619001;Parent=GSCOCG00024619001;Name=Cc10_g01480 | |
| 32892 chr10 manual_curation polypeptide 1093175 1093393 . + . ID=GSCOCP00024619001;Dbxref=SwissProt:Q9SYQ8,TAIR:AT1G75820.1,TrEMBL:B9H500,TrEMBL:B9R8B4,TrEMBL:F6H1M3;Derives_from=GSCOCT00024619001;Name=Cc10_g01480;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Receptor protein kinase CLAVATA1,CC_functional_completeness:fragment,CC_gene:CLV1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024619001~ Receptor protein kinase CLAVATA1~ CLV1~ fragment;original_location=1093175..1093393;owner=coffea | |
| 32893 chr10 manual_curation exon 1093043 1093743 . + . Parent=GSCOCT00024619001 | |
| 32894 chr10 manual_curation CDS 1093175 1093393 . + 0 Parent=GSCOCT00024619001 | |
| 32895 chr10 manual_curation gene 1094220 1100365 . + . ID=GSCOCG00024620001;Name=Cc10_g01490 | |
| 32896 chr10 manual_curation mRNA 1094220 1100365 . + . ID=GSCOCT00024620001;Parent=GSCOCG00024620001;Name=Cc10_g01490 | |
| 32897 chr10 manual_curation polypeptide 1094220 1099659 . + . ID=GSCOCP00024620001;Dbxref=GENE3D:G3DSA:3.40.850.10,InterPro:IPR001752,PFAM:PF00225,PRINTS:PR00380,PROFILE:PS50067,SMART:SM00129,SwissProt:O59751,SwissProt:P46863,SwissProt:P46874,TAIR:AT1G18550.1,TAIR:AT1G20060.1,TAIR:AT1G59540.1,TrEMBL:B9I6D5,TrEMBL:B9R8B3,TrEMBL:F6H1M1;Derives_from=GSCOCT00024620001;Name=Cc10_g01490;Ontology_term=CC_evidence_code:ISS,GO:0003777,GO:0005524,GO:0007018,CC_EC_number:missing_EC_number,PRODUCT:Putative Kinesin-like protein KLP2 (Fragment),CC_functional_completeness:modules,CC_gene:klp6,CC_gene:Klp61F;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024620001~ Putative Kinesin-like protein KLP2 (Fragment)~ klp6~ modules;original_location=join(1094220..1094422%2C1094450..1094747%2C1094854..1095053%2C1095237..1095360%2C1095484..1095578%2C1095838..1095973%2C1096674..1096739%2C1096909..1096971%2C1097100..1097150%2C1097272..1097354%2C1097435..1097549%2C1097893..1097935%2C1098022..1098218%2C1098344..1098472%2C1098555..1098620%2C1098724..1099027%2C1099463..1099659);owner=coffea | |
| 32898 chr10 manual_curation exon 1094220 1094422 . + . Parent=GSCOCT00024620001 | |
| 32899 chr10 manual_curation exon 1094450 1094747 . + . Parent=GSCOCT00024620001 | |
| 32900 chr10 manual_curation exon 1094854 1095053 . + . Parent=GSCOCT00024620001 | |
| 32901 chr10 manual_curation exon 1095237 1095360 . + . Parent=GSCOCT00024620001 | |
| 32902 chr10 manual_curation exon 1095484 1095578 . + . Parent=GSCOCT00024620001 | |
| 32903 chr10 manual_curation exon 1095838 1095973 . + . Parent=GSCOCT00024620001 | |
| 32904 chr10 manual_curation exon 1096674 1096739 . + . Parent=GSCOCT00024620001 | |
| 32905 chr10 manual_curation exon 1096909 1096971 . + . Parent=GSCOCT00024620001 | |
| 32906 chr10 manual_curation exon 1097100 1097150 . + . Parent=GSCOCT00024620001 | |
| 32907 chr10 manual_curation exon 1097272 1097354 . + . Parent=GSCOCT00024620001 | |
| 32908 chr10 manual_curation exon 1097435 1097549 . + . Parent=GSCOCT00024620001 | |
| 32909 chr10 manual_curation exon 1097893 1097935 . + . Parent=GSCOCT00024620001 | |
| 32910 chr10 manual_curation exon 1098022 1098218 . + . Parent=GSCOCT00024620001 | |
| 32911 chr10 manual_curation exon 1098344 1098472 . + . Parent=GSCOCT00024620001 | |
| 32912 chr10 manual_curation exon 1098555 1098620 . + . Parent=GSCOCT00024620001 | |
| 32913 chr10 manual_curation exon 1098724 1099027 . + . Parent=GSCOCT00024620001 | |
| 32914 chr10 manual_curation exon 1099463 1100365 . + . Parent=GSCOCT00024620001 | |
| 32915 chr10 manual_curation CDS 1094220 1094422 . + 0 Parent=GSCOCT00024620001 | |
| 32916 chr10 manual_curation CDS 1094450 1094747 . + 2 Parent=GSCOCT00024620001 | |
| 32917 chr10 manual_curation CDS 1094854 1095053 . + 0 Parent=GSCOCT00024620001 | |
| 32918 chr10 manual_curation CDS 1095237 1095360 . + 2 Parent=GSCOCT00024620001 | |
| 32919 chr10 manual_curation CDS 1095484 1095578 . + 0 Parent=GSCOCT00024620001 | |
| 32920 chr10 manual_curation CDS 1095838 1095973 . + 2 Parent=GSCOCT00024620001 | |
| 32921 chr10 manual_curation CDS 1096674 1096739 . + 0 Parent=GSCOCT00024620001 | |
| 32922 chr10 manual_curation CDS 1096909 1096971 . + 0 Parent=GSCOCT00024620001 | |
| 32923 chr10 manual_curation CDS 1097100 1097150 . + 0 Parent=GSCOCT00024620001 | |
| 32924 chr10 manual_curation CDS 1097272 1097354 . + 0 Parent=GSCOCT00024620001 | |
| 32925 chr10 manual_curation CDS 1097435 1097549 . + 2 Parent=GSCOCT00024620001 | |
| 32926 chr10 manual_curation CDS 1097893 1097935 . + 0 Parent=GSCOCT00024620001 | |
| 32927 chr10 manual_curation CDS 1098022 1098218 . + 1 Parent=GSCOCT00024620001 | |
| 32928 chr10 manual_curation CDS 1098344 1098472 . + 0 Parent=GSCOCT00024620001 | |
| 32929 chr10 manual_curation CDS 1098555 1098620 . + 0 Parent=GSCOCT00024620001 | |
| 32930 chr10 manual_curation CDS 1098724 1099027 . + 0 Parent=GSCOCT00024620001 | |
| 32931 chr10 manual_curation CDS 1099463 1099659 . + 1 Parent=GSCOCT00024620001 | |
| 32932 chr10 manual_curation gene 1105097 1110613 . + . ID=GSCOCG00024622001;Name=Cc10_g01500 | |
| 32933 chr10 manual_curation mRNA 1105097 1110613 . + . ID=GSCOCT00024622001;Parent=GSCOCG00024622001;Name=Cc10_g01500 | |
| 32934 chr10 manual_curation polypeptide 1107997 1110174 . + . ID=GSCOCP00024622001;Dbxref=TAIR:AT4G24200.1,TrEMBL:B9H4Z9,TrEMBL:B9R8B2,TrEMBL:F6H1M0;Derives_from=GSCOCT00024622001;Name=Cc10_g01500;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024622001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=1107997..1110174;owner=coffea | |
| 32935 chr10 manual_curation exon 1105097 1105464 . + . Parent=GSCOCT00024622001 | |
| 32936 chr10 manual_curation exon 1106143 1106294 . + . Parent=GSCOCT00024622001 | |
| 32937 chr10 manual_curation exon 1107870 1110613 . + . Parent=GSCOCT00024622001 | |
| 32938 chr10 manual_curation CDS 1107997 1110174 . + 0 Parent=GSCOCT00024622001 | |
| 32939 chr10 manual_curation gene 1112024 1112640 . - . ID=GSCOCG00024623001;Name=Cc10_g01510 | |
| 32940 chr10 manual_curation mRNA 1112024 1112640 . - . ID=GSCOCT00024623001;Parent=GSCOCG00024623001;Name=Cc10_g01510 | |
| 32941 chr10 manual_curation polypeptide 1112024 1112640 . - . ID=GSCOCP00024623001;Dbxref=SwissProt:Q9ZRZ8,TAIR:AT4G16630.1,TrEMBL:B9GQT0,TrEMBL:F6H1L9,TrEMBL:G7J1D1;Derives_from=GSCOCT00024623001;Name=Cc10_g01510;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative DEAD-box ATP-dependent RNA helicase 28,CC_functional_completeness:fragment,CC_gene:RH28;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024623001~ Putative DEAD-box ATP-dependent RNA helicase 28~ RH28~ fragment;original_location=complement(join(1112611..1112640%2C1112449..1112526%2C1112024..1112239));owner=coffea | |
| 32942 chr10 manual_curation exon 1112024 1112239 . - . Parent=GSCOCT00024623001 | |
| 32943 chr10 manual_curation exon 1112449 1112526 . - . Parent=GSCOCT00024623001 | |
| 32944 chr10 manual_curation exon 1112611 1112640 . - . Parent=GSCOCT00024623001 | |
| 32945 chr10 manual_curation CDS 1112024 1112239 . - 0 Parent=GSCOCT00024623001 | |
| 32946 chr10 manual_curation CDS 1112449 1112526 . - 0 Parent=GSCOCT00024623001 | |
| 32947 chr10 manual_curation CDS 1112611 1112640 . - 0 Parent=GSCOCT00024623001 | |
| 32948 chr10 manual_curation gene 1116282 1117415 . - . ID=GSCOCG00024625001;Name=Cc10_g01520 | |
| 32949 chr10 manual_curation mRNA 1116282 1117415 . - . ID=GSCOCT00024625001;Parent=GSCOCG00024625001;Name=Cc10_g01520 | |
| 32950 chr10 manual_curation polypeptide 1116282 1117415 . - . ID=GSCOCP00024625001;Dbxref=InterPro:IPR001841,InterPro:IPR018957,PFAM:PF00097,PROFILE:PS50089,SMART:SM00184,SwissProt:P0CH30,SwissProt:Q8LPN7,SwissProt:Q9SPL2,TAIR:AT1G55530.1,TAIR:AT5G01980.1,TAIR:AT5G64920.1,TrEMBL:A5BX64,TrEMBL:B9R8B0,TrEMBL:D7MSL3;Derives_from=GSCOCT00024625001;Name=Cc10_g01520;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative E3 ubiquitin-protein ligase CIP8,CC_functional_completeness:complete,CC_gene:CIP8,CC_gene:At3g19950,CC_gene:RING1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024625001~ Putative E3 ubiquitin-protein ligase CIP8~ CIP8~ complete;original_location=complement(1116282..1117415);owner=coffea | |
| 32951 chr10 manual_curation exon 1116282 1117415 . - . Parent=GSCOCT00024625001 | |
| 32952 chr10 manual_curation CDS 1116282 1117415 . - 0 Parent=GSCOCT00024625001 | |
| 32953 chr10 manual_curation gene 1120505 1121407 . + . ID=GSCOCG00024626001;Name=Cc10_g01530 | |
| 32954 chr10 manual_curation mRNA 1120505 1121407 . + . ID=GSCOCT00024626001;Parent=GSCOCG00024626001;Name=Cc10_g01530 | |
| 32955 chr10 manual_curation polypeptide 1120850 1121233 . + . ID=GSCOCP00024626001;Derives_from=GSCOCT00024626001;Name=Cc10_g01530;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024626001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1120850..1121233;owner=coffea | |
| 32956 chr10 manual_curation exon 1120505 1121407 . + . Parent=GSCOCT00024626001 | |
| 32957 chr10 manual_curation CDS 1120850 1121233 . + 0 Parent=GSCOCT00024626001 | |
| 32958 chr10 manual_curation gene 1126129 1132418 . + . ID=GSCOCG00024627001;Name=Cc10_g01540 | |
| 32959 chr10 manual_curation mRNA 1126129 1132418 . + . ID=GSCOCT00024627001;Parent=GSCOCG00024627001;Name=Cc10_g01540 | |
| 32960 chr10 manual_curation polypeptide 1126288 1131546 . + . ID=GSCOCP00024627001;Dbxref=GENE3D:G3DSA:3.30.565.10,HAMAP:MF_00505,InterPro:IPR001404,InterPro:IPR003594,InterPro:IPR015566,InterPro:IPR019805,InterPro:IPR020568,InterPro:IPR020575,InterPro:IPR020576,PANTHER:PTHR11528,PANTHER:PTHR11528:SF21,PFAM:PF00183,PFAM:PF02518,PIR:PIRSF002583,PRINTS:PR00775,PROSITE:PS00298,SMART:SM00387,SUPERFAMILY:SSF54211,SUPERFAMILY:SSF55874,SwissProt:P35016,SwissProt:P36183,SwissProt:Q9STX5,TAIR:AT4G24190.1,TAIR:AT5G52640.1,TAIR:AT5G56000.1,TrEMBL:B9H4Z6,TrEMBL:E0CQ80,TrEMBL:G9MD87;Derives_from=GSCOCT00024627001;Name=Cc10_g01540;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006457,GO:0006950,GO:0051082,CC_EC_number:missing_EC_number,PRODUCT:Endoplasmin homolog,CC_functional_completeness:complete,CC_gene:HSP90,CC_gene:SHD;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024627001~ Endoplasmin homolog~ HSP90~ complete;original_location=join(1126288..1126354%2C1126858..1126978%2C1127083..1127236%2C1127355..1127435%2C1127564..1127675%2C1127785..1127911%2C1128021..1128159%2C1128729..1128846%2C1129026..1129219%2C1129332..1129547%2C1129648..1129813%2C1130115..1130256%2C1130351..1130501%2C1130757..1131161%2C1131292..1131546);owner=coffea | |
| 32961 chr10 manual_curation exon 1126129 1126354 . + . Parent=GSCOCT00024627001 | |
| 32962 chr10 manual_curation exon 1126858 1126978 . + . Parent=GSCOCT00024627001 | |
| 32963 chr10 manual_curation exon 1127083 1127236 . + . Parent=GSCOCT00024627001 | |
| 32964 chr10 manual_curation exon 1127355 1127435 . + . Parent=GSCOCT00024627001 | |
| 32965 chr10 manual_curation exon 1127564 1127675 . + . Parent=GSCOCT00024627001 | |
| 32966 chr10 manual_curation exon 1127785 1127911 . + . Parent=GSCOCT00024627001 | |
| 32967 chr10 manual_curation exon 1128021 1128159 . + . Parent=GSCOCT00024627001 | |
| 32968 chr10 manual_curation exon 1128729 1128846 . + . Parent=GSCOCT00024627001 | |
| 32969 chr10 manual_curation exon 1129026 1129219 . + . Parent=GSCOCT00024627001 | |
| 32970 chr10 manual_curation exon 1129332 1129547 . + . Parent=GSCOCT00024627001 | |
| 32971 chr10 manual_curation exon 1129648 1129813 . + . Parent=GSCOCT00024627001 | |
| 32972 chr10 manual_curation exon 1130115 1130256 . + . Parent=GSCOCT00024627001 | |
| 32973 chr10 manual_curation exon 1130351 1130501 . + . Parent=GSCOCT00024627001 | |
| 32974 chr10 manual_curation exon 1130757 1131161 . + . Parent=GSCOCT00024627001 | |
| 32975 chr10 manual_curation exon 1131292 1132418 . + . Parent=GSCOCT00024627001 | |
| 32976 chr10 manual_curation CDS 1126288 1126354 . + 0 Parent=GSCOCT00024627001 | |
| 32977 chr10 manual_curation CDS 1126858 1126978 . + 1 Parent=GSCOCT00024627001 | |
| 32978 chr10 manual_curation CDS 1127083 1127236 . + 2 Parent=GSCOCT00024627001 | |
| 32979 chr10 manual_curation CDS 1127355 1127435 . + 0 Parent=GSCOCT00024627001 | |
| 32980 chr10 manual_curation CDS 1127564 1127675 . + 0 Parent=GSCOCT00024627001 | |
| 32981 chr10 manual_curation CDS 1127785 1127911 . + 1 Parent=GSCOCT00024627001 | |
| 32982 chr10 manual_curation CDS 1128021 1128159 . + 2 Parent=GSCOCT00024627001 | |
| 32983 chr10 manual_curation CDS 1128729 1128846 . + 0 Parent=GSCOCT00024627001 | |
| 32984 chr10 manual_curation CDS 1129026 1129219 . + 1 Parent=GSCOCT00024627001 | |
| 32985 chr10 manual_curation CDS 1129332 1129547 . + 0 Parent=GSCOCT00024627001 | |
| 32986 chr10 manual_curation CDS 1129648 1129813 . + 0 Parent=GSCOCT00024627001 | |
| 32987 chr10 manual_curation CDS 1130115 1130256 . + 1 Parent=GSCOCT00024627001 | |
| 32988 chr10 manual_curation CDS 1130351 1130501 . + 2 Parent=GSCOCT00024627001 | |
| 32989 chr10 manual_curation CDS 1130757 1131161 . + 0 Parent=GSCOCT00024627001 | |
| 32990 chr10 manual_curation CDS 1131292 1131546 . + 0 Parent=GSCOCT00024627001 | |
| 32991 chr10 manual_curation gene 1134928 1137342 . - . ID=GSCOCG00024629001;Name=Cc10_g01550 | |
| 32992 chr10 manual_curation mRNA 1134928 1137342 . - . ID=GSCOCT00024629001;Parent=GSCOCG00024629001;Name=Cc10_g01550 | |
| 32993 chr10 manual_curation polypeptide 1134928 1137048 . - . ID=GSCOCP00024629001;Dbxref=GENE3D:G3DSA:2.60.110.10,InterPro:IPR001938,PFAM:PF00314,PRINTS:PR00347,PROFILE:PS51367,SMART:SM00205,SUPERFAMILY:SSF49870,SwissProt:O80327,SwissProt:P28493,SwissProt:P50699,TAIR:AT1G75800.1,TAIR:AT4G24180.1,TAIR:AT4G38660.1,TrEMBL:B9R8A6,TrEMBL:E0CQ79,TrEMBL:I1LPR0;Derives_from=GSCOCT00024629001;Name=Cc10_g01550;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Thaumatin-like protein,CC_functional_completeness:modules,CC_gene:At1g18250,CC_gene:At1g75040,CC_gene:TL1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024629001~ Thaumatin-like protein~ At1g18250~ modules;original_location=complement(join(1136988..1137048%2C1136019..1136703%2C1134928..1135171));owner=coffea | |
| 32994 chr10 manual_curation exon 1134928 1135171 . - . Parent=GSCOCT00024629001 | |
| 32995 chr10 manual_curation exon 1136019 1136703 . - . Parent=GSCOCT00024629001 | |
| 32996 chr10 manual_curation exon 1136988 1137342 . - . Parent=GSCOCT00024629001 | |
| 32997 chr10 manual_curation CDS 1134928 1135171 . - 2 Parent=GSCOCT00024629001 | |
| 32998 chr10 manual_curation CDS 1136019 1136703 . - 1 Parent=GSCOCT00024629001 | |
| 32999 chr10 manual_curation CDS 1136988 1137048 . - 0 Parent=GSCOCT00024629001 | |
| 33000 chr10 manual_curation gene 1145698 1147953 . - . ID=GSCOCG00024633001;Name=Cc10_g01560 | |
| 33001 chr10 manual_curation mRNA 1145698 1147953 . - . ID=GSCOCT00024633001;Parent=GSCOCG00024633001;Name=Cc10_g01560 | |
| 33002 chr10 manual_curation polypeptide 1145698 1147803 . - . ID=GSCOCP00024633001;Dbxref=GENE3D:G3DSA:2.60.110.10,InterPro:IPR001938,InterPro:IPR017949,PFAM:PF00314,PRINTS:PR00347,PROFILE:PS51367,PROSITE:PS00316,SMART:SM00205,SUPERFAMILY:SSF49870,SwissProt:O80327,SwissProt:P83332,SwissProt:Q9FSG7,TAIR:AT1G20030.2,TAIR:AT1G75800.1,TAIR:AT4G36010.1,TrEMBL:B6CQU0,TrEMBL:B6CQU1,TrEMBL:G9CM55;Derives_from=GSCOCT00024633001;Name=Cc10_g01560;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Thaumatin-like protein 1,CC_functional_completeness:modules,CC_gene:TL1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024633001~ Thaumatin-like protein 1~ TL1~ modules;original_location=complement(join(1147746..1147803%2C1146842..1147538%2C1145698..1145887));owner=coffea | |
| 33003 chr10 manual_curation exon 1145698 1145887 . - . Parent=GSCOCT00024633001 | |
| 33004 chr10 manual_curation exon 1146842 1147538 . - . Parent=GSCOCT00024633001 | |
| 33005 chr10 manual_curation exon 1147746 1147953 . - . Parent=GSCOCT00024633001 | |
| 33006 chr10 manual_curation CDS 1145698 1145887 . - 2 Parent=GSCOCT00024633001 | |
| 33007 chr10 manual_curation CDS 1146842 1147538 . - 1 Parent=GSCOCT00024633001 | |
| 33008 chr10 manual_curation CDS 1147746 1147803 . - 0 Parent=GSCOCT00024633001 | |
| 33009 chr10 manual_curation gene 1153233 1157208 . - . ID=GSCOCG00024636001;Name=Cc10_g01570 | |
| 33010 chr10 manual_curation mRNA 1153233 1157208 . - . ID=GSCOCT00024636001;Parent=GSCOCG00024636001;Name=Cc10_g01570 | |
| 33011 chr10 manual_curation polypeptide 1153233 1157133 . - . ID=GSCOCP00024636001;Dbxref=InterPro:IPR006839,PFAM:PF04751,TAIR:AT4G24175.1,TrEMBL:B9H4Z2,TrEMBL:B9R8A4,TrEMBL:E0CQ76;Derives_from=GSCOCT00024636001;Name=Cc10_g01570;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B CONTAINS InterPro DOMAIN/s,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024636001~ Putative unknown protein%3B CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0307 (InterPro:IPR006839)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(1156757..1157133%2C1156581..1156629%2C1156401..1156452%2C1155392..1155552%2C1154855..1154968%2C1153233..1153394));owner=coffea | |
| 33012 chr10 manual_curation exon 1153233 1153394 . - . Parent=GSCOCT00024636001 | |
| 33013 chr10 manual_curation exon 1154855 1154968 . - . Parent=GSCOCT00024636001 | |
| 33014 chr10 manual_curation exon 1155392 1155552 . - . Parent=GSCOCT00024636001 | |
| 33015 chr10 manual_curation exon 1156401 1156452 . - . Parent=GSCOCT00024636001 | |
| 33016 chr10 manual_curation exon 1156581 1156629 . - . Parent=GSCOCT00024636001 | |
| 33017 chr10 manual_curation exon 1156757 1157208 . - . Parent=GSCOCT00024636001 | |
| 33018 chr10 manual_curation CDS 1153233 1153394 . - 0 Parent=GSCOCT00024636001 | |
| 33019 chr10 manual_curation CDS 1154855 1154968 . - 0 Parent=GSCOCT00024636001 | |
| 33020 chr10 manual_curation CDS 1155392 1155552 . - 1 Parent=GSCOCT00024636001 | |
| 33021 chr10 manual_curation CDS 1156401 1156452 . - 0 Parent=GSCOCT00024636001 | |
| 33022 chr10 manual_curation CDS 1156581 1156629 . - 2 Parent=GSCOCT00024636001 | |
| 33023 chr10 manual_curation CDS 1156757 1157133 . - 0 Parent=GSCOCT00024636001 | |
| 33024 chr10 manual_curation gene 1159647 1160117 . - . ID=GSCOCG00024638001;Name=Cc10_g01580 | |
| 33025 chr10 manual_curation mRNA 1159647 1160117 . - . ID=GSCOCT00024638001;Parent=GSCOCG00024638001;Name=Cc10_g01580 | |
| 33026 chr10 manual_curation polypeptide 1159647 1160117 . - . ID=GSCOCP00024638001;Dbxref=GENE3D:G3DSA:1.10.287.110,InterPro:IPR001623,InterPro:IPR015609,PANTHER:PTHR11821,PFAM:PF00226,PROFILE:PS50076,SMART:SM00271,SUPERFAMILY:SSF46565,SwissProt:Q3AF07,SwissProt:Q67S53,SwissProt:Q9FYB5,TAIR:AT2G17880.1,TAIR:AT3G13310.1,TAIR:AT4G36040.1,TrEMBL:A9PIT0,TrEMBL:B9GQT8,TrEMBL:F6H1L6;Derives_from=GSCOCT00024638001;Name=Cc10_g01580;Ontology_term=CC_evidence_code:ISS,GO:0031072,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:ATJ11,CC_gene:dnaJ;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024638001~ Putative uncharacterized protein~ ATJ11~ fragment;original_location=complement(1159647..1160117);owner=coffea | |
| 33027 chr10 manual_curation exon 1159647 1160117 . - . Parent=GSCOCT00024638001 | |
| 33028 chr10 manual_curation CDS 1159647 1160117 . - 0 Parent=GSCOCT00024638001 | |
| 33029 chr10 manual_curation gene 1162683 1169172 . - . ID=GSCOCG00024640001;Name=Cc10_g01590 | |
| 33030 chr10 manual_curation mRNA 1162683 1169172 . - . ID=GSCOCT00024640001;Parent=GSCOCG00024640001;Name=Cc10_g01590 | |
| 33031 chr10 manual_curation polypeptide 1162964 1169172 . - . ID=GSCOCP00024640001;Dbxref=InterPro:IPR007700,InterPro:IPR021864,PFAM:PF05003,PFAM:PF11961,TAIR:AT1G30755.1,TAIR:AT1G34320.1,TAIR:AT5G08660.1,TrEMBL:B9H4Y7,TrEMBL:B9R8A1,TrEMBL:F6H1L5;Derives_from=GSCOCT00024640001;Name=Cc10_g01590;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF668),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024640001~ Protein of unknown function (DUF668)~ unknown_gene~ complete;original_location=complement(join(1168882..1169172%2C1167074..1167396%2C1166784..1166876%2C1166608..1166698%2C1165682..1165775%2C1164999..1165096%2C1164669..1164738%2C1164256..1164356%2C1163974..1164090%2C1163756..1163832%2C1163526..1163573%2C1162964..1163438));owner=coffea | |
| 33032 chr10 manual_curation exon 1162683 1163438 . - . Parent=GSCOCT00024640001 | |
| 33033 chr10 manual_curation exon 1163526 1163573 . - . Parent=GSCOCT00024640001 | |
| 33034 chr10 manual_curation exon 1163756 1163832 . - . Parent=GSCOCT00024640001 | |
| 33035 chr10 manual_curation exon 1163974 1164090 . - . Parent=GSCOCT00024640001 | |
| 33036 chr10 manual_curation exon 1164256 1164356 . - . Parent=GSCOCT00024640001 | |
| 33037 chr10 manual_curation exon 1164669 1164738 . - . Parent=GSCOCT00024640001 | |
| 33038 chr10 manual_curation exon 1164999 1165096 . - . Parent=GSCOCT00024640001 | |
| 33039 chr10 manual_curation exon 1165682 1165775 . - . Parent=GSCOCT00024640001 | |
| 33040 chr10 manual_curation exon 1166608 1166698 . - . Parent=GSCOCT00024640001 | |
| 33041 chr10 manual_curation exon 1166784 1166876 . - . Parent=GSCOCT00024640001 | |
| 33042 chr10 manual_curation exon 1167074 1167396 . - . Parent=GSCOCT00024640001 | |
| 33043 chr10 manual_curation exon 1168882 1169172 . - . Parent=GSCOCT00024640001 | |
| 33044 chr10 manual_curation CDS 1162964 1163438 . - 2 Parent=GSCOCT00024640001 | |
| 33045 chr10 manual_curation CDS 1163526 1163573 . - 2 Parent=GSCOCT00024640001 | |
| 33046 chr10 manual_curation CDS 1163756 1163832 . - 0 Parent=GSCOCT00024640001 | |
| 33047 chr10 manual_curation CDS 1163974 1164090 . - 0 Parent=GSCOCT00024640001 | |
| 33048 chr10 manual_curation CDS 1164256 1164356 . - 1 Parent=GSCOCT00024640001 | |
| 33049 chr10 manual_curation CDS 1164669 1164738 . - 0 Parent=GSCOCT00024640001 | |
| 33050 chr10 manual_curation CDS 1164999 1165096 . - 1 Parent=GSCOCT00024640001 | |
| 33051 chr10 manual_curation CDS 1165682 1165775 . - 0 Parent=GSCOCT00024640001 | |
| 33052 chr10 manual_curation CDS 1166608 1166698 . - 2 Parent=GSCOCT00024640001 | |
| 33053 chr10 manual_curation CDS 1166784 1166876 . - 2 Parent=GSCOCT00024640001 | |
| 33054 chr10 manual_curation CDS 1167074 1167396 . - 0 Parent=GSCOCT00024640001 | |
| 33055 chr10 manual_curation CDS 1168882 1169172 . - 0 Parent=GSCOCT00024640001 | |
| 33056 chr10 manual_curation gene 1176912 1177430 . - . ID=GSCOCG00024643001;Name=Cc10_g01600 | |
| 33057 chr10 manual_curation mRNA 1176912 1177430 . - . ID=GSCOCT00024643001;Parent=GSCOCG00024643001;Name=Cc10_g01600 | |
| 33058 chr10 manual_curation polypeptide 1176912 1177430 . - . ID=GSCOCP00024643001;Dbxref=GENE3D:G3DSA:2.40.100.10,InterPro:IPR002130,InterPro:IPR015891,InterPro:IPR020892,PFAM:PF00160,PRINTS:PR00153,PROFILE:PS50072,PROSITE:PS00170,SUPERFAMILY:SSF50891,SwissProt:O49886,SwissProt:Q39613,SwissProt:Q8W171,TAIR:AT2G16600.1,TAIR:AT2G21130.1,TAIR:AT4G34870.1,TrEMBL:B3FNQ1,TrEMBL:G8XQW2,TrEMBL:Q8VX73;Derives_from=GSCOCT00024643001;Name=Cc10_g01600;Ontology_term=CC_evidence_code:ISS,GO:0003755,GO:0006457,CC_EC_number:5.2.1.8,PRODUCT:Peptidyl-prolyl cis-trans isomerase,CC_functional_completeness:complete,CC_gene:PCKR1,CC_gene:Cyp1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024643001~ Peptidyl-prolyl cis-trans isomerase~ PCKR1~ complete;original_location=complement(1176912..1177430);owner=coffea | |
| 33059 chr10 manual_curation exon 1176912 1177430 . - . Parent=GSCOCT00024643001 | |
| 33060 chr10 manual_curation CDS 1176912 1177430 . - 0 Parent=GSCOCT00024643001 | |
| 33061 chr10 manual_curation gene 1181841 1190165 . + . ID=GSCOCG00024644001;Name=Cc10_g01610 | |
| 33062 chr10 manual_curation mRNA 1181841 1190165 . + . ID=GSCOCT00024644001;Parent=GSCOCG00024644001;Name=Cc10_g01610 | |
| 33063 chr10 manual_curation polypeptide 1181841 1188627 . + . ID=GSCOCP00024644001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR003613,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR016024,InterPro:IPR017986,InterPro:IPR019775,InterPro:IPR019781,InterPro:IPR019782,InterPro:IPR020472,PFAM:PF00400,PFAM:PF04564,PRINTS:PR00320,PROFILE:PS50082,PROFILE:PS50294,PROSITE:PS00678,SMART:SM00320,SMART:SM00504,SUPERFAMILY:SSF48371,SUPERFAMILY:SSF50978,SwissProt:C6L7U1,SwissProt:D1FP53,SwissProt:D1FP57,TAIR:AT1G23030.1,TAIR:AT1G71020.1,TAIR:AT3G06880.2,TrEMBL:A5BNH0,TrEMBL:B9R899,TrEMBL:F6H1L3;Derives_from=GSCOCT00024644001;Name=Cc10_g01610;Ontology_term=CC_evidence_code:ISS,GO:0000151,GO:0004842,GO:0005488,GO:0016567,CC_EC_number:missing_EC_number,PRODUCT:Putative E3 ubiquitin-protein ligase LIN-1,CC_functional_completeness:complete,CC_gene:CERBERUS,CC_gene:LIN;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024644001~ Putative E3 ubiquitin-protein ligase LIN-1~ CERBERUS~ complete;original_location=join(1181841..1182778%2C1182952..1183015%2C1183111..1183491%2C1183599..1183666%2C1183855..1185132%2C1185526..1185670%2C1185775..1186032%2C1186150..1186459%2C1186547..1186671%2C1186741..1186860%2C1187067..1187198%2C1187563..1187685%2C1187768..1187878%2C1188035..1188178%2C1188272..1188523%2C1188610..1188627);owner=coffea | |
| 33064 chr10 manual_curation exon 1181841 1182778 . + . Parent=GSCOCT00024644001 | |
| 33065 chr10 manual_curation exon 1182952 1183015 . + . Parent=GSCOCT00024644001 | |
| 33066 chr10 manual_curation exon 1183111 1183491 . + . Parent=GSCOCT00024644001 | |
| 33067 chr10 manual_curation exon 1183599 1183666 . + . Parent=GSCOCT00024644001 | |
| 33068 chr10 manual_curation exon 1183855 1185132 . + . Parent=GSCOCT00024644001 | |
| 33069 chr10 manual_curation exon 1185526 1185670 . + . Parent=GSCOCT00024644001 | |
| 33070 chr10 manual_curation exon 1185775 1186032 . + . Parent=GSCOCT00024644001 | |
| 33071 chr10 manual_curation exon 1186150 1186459 . + . Parent=GSCOCT00024644001 | |
| 33072 chr10 manual_curation exon 1186547 1186671 . + . Parent=GSCOCT00024644001 | |
| 33073 chr10 manual_curation exon 1186741 1186860 . + . Parent=GSCOCT00024644001 | |
| 33074 chr10 manual_curation exon 1187067 1187198 . + . Parent=GSCOCT00024644001 | |
| 33075 chr10 manual_curation exon 1187563 1187685 . + . Parent=GSCOCT00024644001 | |
| 33076 chr10 manual_curation exon 1187768 1187878 . + . Parent=GSCOCT00024644001 | |
| 33077 chr10 manual_curation exon 1188035 1188178 . + . Parent=GSCOCT00024644001 | |
| 33078 chr10 manual_curation exon 1188272 1188523 . + . Parent=GSCOCT00024644001 | |
| 33079 chr10 manual_curation exon 1188610 1190165 . + . Parent=GSCOCT00024644001 | |
| 33080 chr10 manual_curation CDS 1181841 1182778 . + 0 Parent=GSCOCT00024644001 | |
| 33081 chr10 manual_curation CDS 1182952 1183015 . + 2 Parent=GSCOCT00024644001 | |
| 33082 chr10 manual_curation CDS 1183111 1183491 . + 0 Parent=GSCOCT00024644001 | |
| 33083 chr10 manual_curation CDS 1183599 1183666 . + 0 Parent=GSCOCT00024644001 | |
| 33084 chr10 manual_curation CDS 1183855 1185132 . + 2 Parent=GSCOCT00024644001 | |
| 33085 chr10 manual_curation CDS 1185526 1185670 . + 2 Parent=GSCOCT00024644001 | |
| 33086 chr10 manual_curation CDS 1185775 1186032 . + 0 Parent=GSCOCT00024644001 | |
| 33087 chr10 manual_curation CDS 1186150 1186459 . + 0 Parent=GSCOCT00024644001 | |
| 33088 chr10 manual_curation CDS 1186547 1186671 . + 1 Parent=GSCOCT00024644001 | |
| 33089 chr10 manual_curation CDS 1186741 1186860 . + 0 Parent=GSCOCT00024644001 | |
| 33090 chr10 manual_curation CDS 1187067 1187198 . + 0 Parent=GSCOCT00024644001 | |
| 33091 chr10 manual_curation CDS 1187563 1187685 . + 0 Parent=GSCOCT00024644001 | |
| 33092 chr10 manual_curation CDS 1187768 1187878 . + 0 Parent=GSCOCT00024644001 | |
| 33093 chr10 manual_curation CDS 1188035 1188178 . + 0 Parent=GSCOCT00024644001 | |
| 33094 chr10 manual_curation CDS 1188272 1188523 . + 0 Parent=GSCOCT00024644001 | |
| 33095 chr10 manual_curation CDS 1188610 1188627 . + 0 Parent=GSCOCT00024644001 | |
| 33096 chr10 manual_curation gene 1193183 1195151 . + . ID=GSCOCG00024645001;Name=Cc10_g01620 | |
| 33097 chr10 manual_curation mRNA 1193183 1195151 . + . ID=GSCOCT00024645001;Parent=GSCOCG00024645001;Name=Cc10_g01620 | |
| 33098 chr10 manual_curation polypeptide 1193341 1195151 . + . ID=GSCOCP00024645001;Dbxref=InterPro:IPR010358,PFAM:PF06113,SwissProt:Q6DJ78,SwissProt:Q6GPL9,SwissProt:Q6SP92,TAIR:AT5G42470.1,TrEMBL:B9GQU6,TrEMBL:B9R898,TrEMBL:E0CQ68;Derives_from=GSCOCT00024645001;Name=Cc10_g01620;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:CONTAINS InterPro DOMAIN/s,CC_functional_completeness:fragment,CC_gene:bre,CC_gene:Bre;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024645001~ CONTAINS InterPro DOMAIN/s: Brain/reproductive organ-expressed protein (InterPro:IPR010358)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink).~ bre~ fragment;original_location=join(1193341..1193418%2C1193502..1193589%2C1193676..1193844%2C1193960..1194050%2C1194926..1194961%2C1195041..1195151);owner=coffea | |
| 33099 chr10 manual_curation exon 1193183 1193418 . + . Parent=GSCOCT00024645001 | |
| 33100 chr10 manual_curation exon 1193502 1193589 . + . Parent=GSCOCT00024645001 | |
| 33101 chr10 manual_curation exon 1193676 1193844 . + . Parent=GSCOCT00024645001 | |
| 33102 chr10 manual_curation exon 1193960 1194050 . + . Parent=GSCOCT00024645001 | |
| 33103 chr10 manual_curation exon 1194926 1194961 . + . Parent=GSCOCT00024645001 | |
| 33104 chr10 manual_curation exon 1195041 1195151 . + . Parent=GSCOCT00024645001 | |
| 33105 chr10 manual_curation CDS 1193341 1193418 . + 0 Parent=GSCOCT00024645001 | |
| 33106 chr10 manual_curation CDS 1193502 1193589 . + 0 Parent=GSCOCT00024645001 | |
| 33107 chr10 manual_curation CDS 1193676 1193844 . + 1 Parent=GSCOCT00024645001 | |
| 33108 chr10 manual_curation CDS 1193960 1194050 . + 2 Parent=GSCOCT00024645001 | |
| 33109 chr10 manual_curation CDS 1194926 1194961 . + 0 Parent=GSCOCT00024645001 | |
| 33110 chr10 manual_curation CDS 1195041 1195151 . + 0 Parent=GSCOCT00024645001 | |
| 33111 chr10 manual_curation gene 1195464 1197346 . + . ID=GSCOCG00024646001;Name=Cc10_g01630 | |
| 33112 chr10 manual_curation mRNA 1195464 1197346 . + . ID=GSCOCT00024646001;Parent=GSCOCG00024646001;Name=Cc10_g01630 | |
| 33113 chr10 manual_curation polypeptide 1195464 1197039 . + . ID=GSCOCP00024646001;Dbxref=InterPro:IPR010358,PFAM:PF06113,SwissProt:Q568D5,SwissProt:Q5ZML0,SwissProt:Q6DJ78,TAIR:AT5G42470.1,TrEMBL:B9H4Y3,TrEMBL:E0CQ68,TrEMBL:I1L2G8;Derives_from=GSCOCT00024646001;Name=Cc10_g01630;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:CONTAINS InterPro DOMAIN/s,CC_functional_completeness:fragment,CC_gene:bre,CC_gene:BRE;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024646001~ CONTAINS InterPro DOMAIN/s: Brain/reproductive organ-expressed protein (InterPro:IPR010358)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink).~ bre~ fragment;original_location=join(1195464..1195508%2C1195565..1195695%2C1195835..1195883%2C1195979..1196068%2C1196156..1196209%2C1196438..1196503%2C1196746..1196843%2C1196970..1197039);owner=coffea | |
| 33114 chr10 manual_curation exon 1195464 1195508 . + . Parent=GSCOCT00024646001 | |
| 33115 chr10 manual_curation exon 1195565 1195695 . + . Parent=GSCOCT00024646001 | |
| 33116 chr10 manual_curation exon 1195835 1195883 . + . Parent=GSCOCT00024646001 | |
| 33117 chr10 manual_curation exon 1195979 1196068 . + . Parent=GSCOCT00024646001 | |
| 33118 chr10 manual_curation exon 1196156 1196209 . + . Parent=GSCOCT00024646001 | |
| 33119 chr10 manual_curation exon 1196438 1196503 . + . Parent=GSCOCT00024646001 | |
| 33120 chr10 manual_curation exon 1196746 1196843 . + . Parent=GSCOCT00024646001 | |
| 33121 chr10 manual_curation exon 1196970 1197346 . + . Parent=GSCOCT00024646001 | |
| 33122 chr10 manual_curation CDS 1195464 1195508 . + 0 Parent=GSCOCT00024646001 | |
| 33123 chr10 manual_curation CDS 1195565 1195695 . + 0 Parent=GSCOCT00024646001 | |
| 33124 chr10 manual_curation CDS 1195835 1195883 . + 2 Parent=GSCOCT00024646001 | |
| 33125 chr10 manual_curation CDS 1195979 1196068 . + 0 Parent=GSCOCT00024646001 | |
| 33126 chr10 manual_curation CDS 1196156 1196209 . + 0 Parent=GSCOCT00024646001 | |
| 33127 chr10 manual_curation CDS 1196438 1196503 . + 0 Parent=GSCOCT00024646001 | |
| 33128 chr10 manual_curation CDS 1196746 1196843 . + 0 Parent=GSCOCT00024646001 | |
| 33129 chr10 manual_curation CDS 1196970 1197039 . + 2 Parent=GSCOCT00024646001 | |
| 33130 chr10 manual_curation gene 1198110 1201989 . + . ID=GSCOCG00024647001;Name=Cc10_g01640 | |
| 33131 chr10 manual_curation mRNA 1198110 1201989 . + . ID=GSCOCT00024647001;Parent=GSCOCG00024647001;Name=Cc10_g01640 | |
| 33132 chr10 manual_curation polypeptide 1198595 1201566 . + . ID=GSCOCP00024647001;Dbxref=GENE3D:G3DSA:3.30.1330.20,GENE3D:G3DSA:3.40.50.1440,InterPro:IPR000217,InterPro:IPR002453,InterPro:IPR003008,InterPro:IPR008280,InterPro:IPR013838,InterPro:IPR017975,InterPro:IPR018316,PANTHER:PTHR11588,PANTHER:PTHR11588:SF9,PFAM:PF00091,PFAM:PF03953,PRINTS:PR01161,PRINTS:PR01163,PROSITE:PS00227,PROSITE:PS00228,SMART:SM00864,SMART:SM00865,SUPERFAMILY:SSF52490,SUPERFAMILY:SSF55307,SwissProt:P12411,SwissProt:P18025,SwissProt:P46263,TAIR:AT1G20010.1,TAIR:AT1G75780.1,TAIR:AT5G23860.1,TrEMBL:A4ZYP3,TrEMBL:B9R897,TrEMBL:F6H1L2;Derives_from=GSCOCT00024647001;Name=Cc10_g01640;Ontology_term=CC_evidence_code:ISS,GO:0003924,GO:0005198,GO:0005525,GO:0005874,GO:0007017,GO:0007018,GO:0043234,GO:0051258,CC_EC_number:missing_EC_number,PRODUCT:Tubulin beta-1 chain,CC_functional_completeness:complete,CC_gene:TUBB1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024647001~ Tubulin beta-1 chain~ TUBB1~ complete;original_location=join(1198595..1198994%2C1200503..1200772%2C1200890..1201566);owner=coffea | |
| 33133 chr10 manual_curation exon 1198110 1198994 . + . Parent=GSCOCT00024647001 | |
| 33134 chr10 manual_curation exon 1200503 1200772 . + . Parent=GSCOCT00024647001 | |
| 33135 chr10 manual_curation exon 1200890 1201989 . + . Parent=GSCOCT00024647001 | |
| 33136 chr10 manual_curation CDS 1198595 1198994 . + 0 Parent=GSCOCT00024647001 | |
| 33137 chr10 manual_curation CDS 1200503 1200772 . + 1 Parent=GSCOCT00024647001 | |
| 33138 chr10 manual_curation CDS 1200890 1201566 . + 1 Parent=GSCOCT00024647001 | |
| 33139 chr10 manual_curation gene 1205937 1208104 . - . ID=GSCOCG00024648001;Name=Cc10_g01650 | |
| 33140 chr10 manual_curation mRNA 1205937 1208104 . - . ID=GSCOCT00024648001;Parent=GSCOCG00024648001;Name=Cc10_g01650 | |
| 33141 chr10 manual_curation polypeptide 1206192 1207945 . - . ID=GSCOCP00024648001;Derives_from=GSCOCT00024648001;Name=Cc10_g01650;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024648001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1207514..1207945%2C1207135..1207203%2C1206845..1206919%2C1206192..1206686));owner=coffea | |
| 33142 chr10 manual_curation exon 1205937 1206686 . - . Parent=GSCOCT00024648001 | |
| 33143 chr10 manual_curation exon 1206845 1206919 . - . Parent=GSCOCT00024648001 | |
| 33144 chr10 manual_curation exon 1207135 1207203 . - . Parent=GSCOCT00024648001 | |
| 33145 chr10 manual_curation exon 1207514 1208104 . - . Parent=GSCOCT00024648001 | |
| 33146 chr10 manual_curation CDS 1206192 1206686 . - 0 Parent=GSCOCT00024648001 | |
| 33147 chr10 manual_curation CDS 1206845 1206919 . - 0 Parent=GSCOCT00024648001 | |
| 33148 chr10 manual_curation CDS 1207135 1207203 . - 0 Parent=GSCOCT00024648001 | |
| 33149 chr10 manual_curation CDS 1207514 1207945 . - 0 Parent=GSCOCT00024648001 | |
| 33150 chr10 manual_curation gene 1213265 1216466 . - . ID=GSCOCG00024649001;Name=Cc10_g01660 | |
| 33151 chr10 manual_curation mRNA 1213265 1216466 . - . ID=GSCOCT00024649001;Parent=GSCOCG00024649001;Name=Cc10_g01660 | |
| 33152 chr10 manual_curation polypeptide 1213550 1216331 . - . ID=GSCOCP00024649001;Dbxref=TAIR:AT1G19990.1,TAIR:AT5G11600.1,TrEMBL:B9R895,TrEMBL:D7KI81,TrEMBL:E0CQ61;Derives_from=GSCOCT00024649001;Name=Cc10_g01660;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024649001~ Putative unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: cultured cell%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G11600.1)%3B Has 11256 Blast hits to 7192 proteins in 541 species: Archae - 6%3B Bacteria - 629%3B Metazoa - 4714%3B Fungi - 936%3B Plants - 545%3B Viruses - 34%3B Other Eukaryotes - 4392 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(1216116..1216331%2C1215901..1216029%2C1215744..1215814%2C1213550..1213868));owner=coffea | |
| 33153 chr10 manual_curation exon 1213265 1213868 . - . Parent=GSCOCT00024649001 | |
| 33154 chr10 manual_curation exon 1215744 1215814 . - . Parent=GSCOCT00024649001 | |
| 33155 chr10 manual_curation exon 1215901 1216029 . - . Parent=GSCOCT00024649001 | |
| 33156 chr10 manual_curation exon 1216116 1216466 . - . Parent=GSCOCT00024649001 | |
| 33157 chr10 manual_curation CDS 1213550 1213868 . - 2 Parent=GSCOCT00024649001 | |
| 33158 chr10 manual_curation CDS 1215744 1215814 . - 0 Parent=GSCOCT00024649001 | |
| 33159 chr10 manual_curation CDS 1215901 1216029 . - 0 Parent=GSCOCT00024649001 | |
| 33160 chr10 manual_curation CDS 1216116 1216331 . - 0 Parent=GSCOCT00024649001 | |
| 33161 chr10 manual_curation gene 1218623 1219649 . + . ID=GSCOCG00024650001;Name=Cc10_g01670 | |
| 33162 chr10 manual_curation mRNA 1218623 1219649 . + . ID=GSCOCT00024650001;Parent=GSCOCG00024650001;Name=Cc10_g01670 | |
| 33163 chr10 manual_curation polypeptide 1218955 1219209 . + . ID=GSCOCP00024650001;Derives_from=GSCOCT00024650001;Name=Cc10_g01670;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024650001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1218955..1219209;owner=coffea | |
| 33164 chr10 manual_curation exon 1218623 1219649 . + . Parent=GSCOCT00024650001 | |
| 33165 chr10 manual_curation CDS 1218955 1219209 . + 0 Parent=GSCOCT00024650001 | |
| 33166 chr10 manual_curation gene 1220945 1224181 . - . ID=GSCOCG00024652001;Name=Cc10_g01680 | |
| 33167 chr10 manual_curation mRNA 1220945 1224181 . - . ID=GSCOCT00024652001;Parent=GSCOCG00024652001;Name=Cc10_g01680 | |
| 33168 chr10 manual_curation polypeptide 1220945 1224019 . - . ID=GSCOCP00024652001;Dbxref=TAIR:AT1G19980.1,TrEMBL:A9PCX1,TrEMBL:B9H4X8,TrEMBL:E0CQ59;Derives_from=GSCOCT00024652001;Name=Cc10_g01680;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative cytomatrix protein-related,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024652001~ Putative cytomatrix protein-related~ unknown_gene~ complete;original_location=complement(join(1223816..1224019%2C1223569..1223680%2C1222885..1222955%2C1222254..1222784%2C1220945..1221064));owner=coffea | |
| 33169 chr10 manual_curation exon 1220945 1221064 . - . Parent=GSCOCT00024652001 | |
| 33170 chr10 manual_curation exon 1222254 1222784 . - . Parent=GSCOCT00024652001 | |
| 33171 chr10 manual_curation exon 1222885 1222955 . - . Parent=GSCOCT00024652001 | |
| 33172 chr10 manual_curation exon 1223569 1223680 . - . Parent=GSCOCT00024652001 | |
| 33173 chr10 manual_curation exon 1223816 1224181 . - . Parent=GSCOCT00024652001 | |
| 33174 chr10 manual_curation CDS 1220945 1221064 . - 0 Parent=GSCOCT00024652001 | |
| 33175 chr10 manual_curation CDS 1222254 1222784 . - 0 Parent=GSCOCT00024652001 | |
| 33176 chr10 manual_curation CDS 1222885 1222955 . - 1 Parent=GSCOCT00024652001 | |
| 33177 chr10 manual_curation CDS 1223569 1223680 . - 0 Parent=GSCOCT00024652001 | |
| 33178 chr10 manual_curation CDS 1223816 1224019 . - 0 Parent=GSCOCT00024652001 | |
| 33179 chr10 manual_curation gene 1226903 1227459 . + . ID=GSCOCG00024654001;Name=Cc10_g01690 | |
| 33180 chr10 manual_curation mRNA 1226903 1227459 . + . ID=GSCOCT00024654001;Parent=GSCOCG00024654001;Name=Cc10_g01690 | |
| 33181 chr10 manual_curation polypeptide 1226940 1227459 . + . ID=GSCOCP00024654001;Dbxref=InterPro:IPR003854,PFAM:PF02704,SwissProt:F4IQJ4,SwissProt:P46689,SwissProt:Q93X17,TAIR:AT1G75750.1,TAIR:AT2G18420.1,TAIR:AT4G09600.1,TrEMBL:B9H4X1,TrEMBL:C9E1T3,TrEMBL:G7J582;Derives_from=GSCOCT00024654001;Name=Cc10_g01690;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Snakin-2,CC_functional_completeness:modules,CC_gene:SN2,CC_gene:GASA11,CC_gene:GASA1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024654001~ Snakin-2~ SN2~ modules;original_location=join(1226940..1227026%2C1227146..1227200%2C1227278..1227459);owner=coffea | |
| 33182 chr10 manual_curation exon 1226903 1227026 . + . Parent=GSCOCT00024654001 | |
| 33183 chr10 manual_curation exon 1227146 1227200 . + . Parent=GSCOCT00024654001 | |
| 33184 chr10 manual_curation exon 1227278 1227459 . + . Parent=GSCOCT00024654001 | |
| 33185 chr10 manual_curation CDS 1226940 1227026 . + 0 Parent=GSCOCT00024654001 | |
| 33186 chr10 manual_curation CDS 1227146 1227200 . + 0 Parent=GSCOCT00024654001 | |
| 33187 chr10 manual_curation CDS 1227278 1227459 . + 1 Parent=GSCOCT00024654001 | |
| 33188 chr10 manual_curation gene 1230910 1236270 . + . ID=GSCOCG00024656001;Name=Cc10_g01700 | |
| 33189 chr10 manual_curation mRNA 1230910 1236270 . + . ID=GSCOCT00024656001;Parent=GSCOCG00024656001;Name=Cc10_g01700 | |
| 33190 chr10 manual_curation polypeptide 1231924 1235998 . + . ID=GSCOCP00024656001;Dbxref=TrEMBL:A5BXN0,TrEMBL:B9GQV6,TrEMBL:F6H1K9;Derives_from=GSCOCT00024656001;Name=Cc10_g01700;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024656001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=join(1231924..1232013%2C1232141..1232201%2C1232569..1232693%2C1232839..1233046%2C1233137..1233422%2C1233531..1233597%2C1233710..1233770%2C1233860..1233929%2C1234008..1234098%2C1234211..1234567%2C1234653..1234865%2C1235579..1235998);owner=coffea | |
| 33191 chr10 manual_curation exon 1230910 1230984 . + . Parent=GSCOCT00024656001 | |
| 33192 chr10 manual_curation exon 1231145 1231486 . + . Parent=GSCOCT00024656001 | |
| 33193 chr10 manual_curation exon 1231862 1232013 . + . Parent=GSCOCT00024656001 | |
| 33194 chr10 manual_curation exon 1232141 1232201 . + . Parent=GSCOCT00024656001 | |
| 33195 chr10 manual_curation exon 1232569 1232693 . + . Parent=GSCOCT00024656001 | |
| 33196 chr10 manual_curation exon 1232839 1233046 . + . Parent=GSCOCT00024656001 | |
| 33197 chr10 manual_curation exon 1233137 1233422 . + . Parent=GSCOCT00024656001 | |
| 33198 chr10 manual_curation exon 1233531 1233597 . + . Parent=GSCOCT00024656001 | |
| 33199 chr10 manual_curation exon 1233710 1233770 . + . Parent=GSCOCT00024656001 | |
| 33200 chr10 manual_curation exon 1233860 1233929 . + . Parent=GSCOCT00024656001 | |
| 33201 chr10 manual_curation exon 1234008 1234098 . + . Parent=GSCOCT00024656001 | |
| 33202 chr10 manual_curation exon 1234211 1234567 . + . Parent=GSCOCT00024656001 | |
| 33203 chr10 manual_curation exon 1234653 1234865 . + . Parent=GSCOCT00024656001 | |
| 33204 chr10 manual_curation exon 1235579 1236270 . + . Parent=GSCOCT00024656001 | |
| 33205 chr10 manual_curation CDS 1231924 1232013 . + 0 Parent=GSCOCT00024656001 | |
| 33206 chr10 manual_curation CDS 1232141 1232201 . + 0 Parent=GSCOCT00024656001 | |
| 33207 chr10 manual_curation CDS 1232569 1232693 . + 1 Parent=GSCOCT00024656001 | |
| 33208 chr10 manual_curation CDS 1232839 1233046 . + 0 Parent=GSCOCT00024656001 | |
| 33209 chr10 manual_curation CDS 1233137 1233422 . + 1 Parent=GSCOCT00024656001 | |
| 33210 chr10 manual_curation CDS 1233531 1233597 . + 2 Parent=GSCOCT00024656001 | |
| 33211 chr10 manual_curation CDS 1233710 1233770 . + 0 Parent=GSCOCT00024656001 | |
| 33212 chr10 manual_curation CDS 1233860 1233929 . + 1 Parent=GSCOCT00024656001 | |
| 33213 chr10 manual_curation CDS 1234008 1234098 . + 2 Parent=GSCOCT00024656001 | |
| 33214 chr10 manual_curation CDS 1234211 1234567 . + 0 Parent=GSCOCT00024656001 | |
| 33215 chr10 manual_curation CDS 1234653 1234865 . + 0 Parent=GSCOCT00024656001 | |
| 33216 chr10 manual_curation CDS 1235579 1235998 . + 0 Parent=GSCOCT00024656001 | |
| 33217 chr10 manual_curation gene 1236768 1241005 . - . ID=GSCOCG00024657001;Name=Cc10_g01710 | |
| 33218 chr10 manual_curation mRNA 1236768 1241005 . - . ID=GSCOCT00024657001;Parent=GSCOCG00024657001;Name=Cc10_g01710 | |
| 33219 chr10 manual_curation polypeptide 1237103 1241005 . - . ID=GSCOCP00024657001;Dbxref=InterPro:IPR011012,InterPro:IPR022775,PFAM:PF01217,SUPERFAMILY:SSF64356,SwissProt:Q7SAQ1,TAIR:AT2G17380.1,TAIR:AT4G35410.2;Derives_from=GSCOCT00024657001;Name=Cc10_g01710;Ontology_term=CC_evidence_code:ISS,GO:0006810,CC_EC_number:missing_EC_number,PRODUCT:AP-2 complex subunit sigma,CC_functional_completeness:modules,CC_gene:AP17,CC_gene:AP-17,CC_gene:aps-2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024657001~ AP-2 complex subunit sigma~ AP17~ modules;original_location=complement(join(1240970..1241005%2C1240403..1240543%2C1240134..1240232%2C1239995..1240045%2C1238478..1238651%2C1237400..1237459%2C1237103..1237144));owner=coffea | |
| 33220 chr10 manual_curation exon 1236768 1237144 . - . Parent=GSCOCT00024657001 | |
| 33221 chr10 manual_curation exon 1237400 1237459 . - . Parent=GSCOCT00024657001 | |
| 33222 chr10 manual_curation exon 1238478 1238651 . - . Parent=GSCOCT00024657001 | |
| 33223 chr10 manual_curation exon 1239995 1240045 . - . Parent=GSCOCT00024657001 | |
| 33224 chr10 manual_curation exon 1240134 1240232 . - . Parent=GSCOCT00024657001 | |
| 33225 chr10 manual_curation exon 1240403 1240543 . - . Parent=GSCOCT00024657001 | |
| 33226 chr10 manual_curation exon 1240970 1241005 . - . Parent=GSCOCT00024657001 | |
| 33227 chr10 manual_curation CDS 1237103 1237144 . - 0 Parent=GSCOCT00024657001 | |
| 33228 chr10 manual_curation CDS 1237400 1237459 . - 0 Parent=GSCOCT00024657001 | |
| 33229 chr10 manual_curation CDS 1238478 1238651 . - 0 Parent=GSCOCT00024657001 | |
| 33230 chr10 manual_curation CDS 1239995 1240045 . - 0 Parent=GSCOCT00024657001 | |
| 33231 chr10 manual_curation CDS 1240134 1240232 . - 0 Parent=GSCOCT00024657001 | |
| 33232 chr10 manual_curation CDS 1240403 1240543 . - 0 Parent=GSCOCT00024657001 | |
| 33233 chr10 manual_curation CDS 1240970 1241005 . - 0 Parent=GSCOCT00024657001 | |
| 33234 chr10 manual_curation gene 1241575 1245616 . - . ID=GSCOCG00024658001;Name=Cc10_g01720 | |
| 33235 chr10 manual_curation mRNA 1241575 1245616 . - . ID=GSCOCT00024658001;Parent=GSCOCG00024658001;Name=Cc10_g01720 | |
| 33236 chr10 manual_curation polypeptide 1241624 1245616 . - . ID=GSCOCP00024658001;Dbxref=InterPro:IPR001312,InterPro:IPR019807,InterPro:IPR022672,InterPro:IPR022673,PANTHER:PTHR19443,PFAM:PF00349,PFAM:PF03727,PRINTS:PR00475,PROSITE:PS00378,SwissProt:Q6Q8A5,SwissProt:Q6Z398,SwissProt:Q9FZG4,TAIR:AT1G47840.1,TAIR:AT2G19860.1,TAIR:AT4G29130.1,TrEMBL:B9R883,TrEMBL:Q4PS96,TrEMBL:Q8VWX3;Derives_from=GSCOCT00024658001;Name=Cc10_g01720;Ontology_term=CC_evidence_code:ISS,GO:0004396,GO:0005524,GO:0005975,GO:0006096,CC_EC_number:2.7.1.1,PRODUCT:Hexokinase-2%2C chloroplastic,CC_functional_completeness:complete,CC_gene:HXK2,CC_gene:HXK4,CC_gene:At1g47840;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024658001~ Hexokinase-2%2C chloroplastic~ HXK2~ complete;original_location=complement(join(1245330..1245616%2C1244715..1244865%2C1244445..1244627%2C1243971..1244045%2C1243702..1243857%2C1243521..1243616%2C1243289..1243419%2C1242400..1242481%2C1241624..1241962));owner=coffea | |
| 33237 chr10 manual_curation exon 1241575 1241962 . - . Parent=GSCOCT00024658001 | |
| 33238 chr10 manual_curation exon 1242400 1242481 . - . Parent=GSCOCT00024658001 | |
| 33239 chr10 manual_curation exon 1243289 1243419 . - . Parent=GSCOCT00024658001 | |
| 33240 chr10 manual_curation exon 1243521 1243616 . - . Parent=GSCOCT00024658001 | |
| 33241 chr10 manual_curation exon 1243702 1243857 . - . Parent=GSCOCT00024658001 | |
| 33242 chr10 manual_curation exon 1243971 1244045 . - . Parent=GSCOCT00024658001 | |
| 33243 chr10 manual_curation exon 1244445 1244627 . - . Parent=GSCOCT00024658001 | |
| 33244 chr10 manual_curation exon 1244715 1244865 . - . Parent=GSCOCT00024658001 | |
| 33245 chr10 manual_curation exon 1245330 1245616 . - . Parent=GSCOCT00024658001 | |
| 33246 chr10 manual_curation CDS 1241624 1241962 . - 0 Parent=GSCOCT00024658001 | |
| 33247 chr10 manual_curation CDS 1242400 1242481 . - 2 Parent=GSCOCT00024658001 | |
| 33248 chr10 manual_curation CDS 1243289 1243419 . - 0 Parent=GSCOCT00024658001 | |
| 33249 chr10 manual_curation CDS 1243521 1243616 . - 0 Parent=GSCOCT00024658001 | |
| 33250 chr10 manual_curation CDS 1243702 1243857 . - 0 Parent=GSCOCT00024658001 | |
| 33251 chr10 manual_curation CDS 1243971 1244045 . - 0 Parent=GSCOCT00024658001 | |
| 33252 chr10 manual_curation CDS 1244445 1244627 . - 0 Parent=GSCOCT00024658001 | |
| 33253 chr10 manual_curation CDS 1244715 1244865 . - 2 Parent=GSCOCT00024658001 | |
| 33254 chr10 manual_curation CDS 1245330 1245616 . - 0 Parent=GSCOCT00024658001 | |
| 33255 chr10 manual_curation gene 1250346 1251880 . + . ID=GSCOCG00024659001;Name=Cc10_g01730 | |
| 33256 chr10 manual_curation mRNA 1250346 1251880 . + . ID=GSCOCT00024659001;Parent=GSCOCG00024659001;Name=Cc10_g01730 | |
| 33257 chr10 manual_curation polypeptide 1250346 1251610 . + . ID=GSCOCP00024659001;Dbxref=InterPro:IPR008545,PFAM:PF05701,SwissProt:F4I0N3,SwissProt:O48822,SwissProt:Q9SD24,TAIR:AT1G75720.1,TAIR:AT2G17940.1,TAIR:AT3G51220.1,TrEMBL:B9GQV8,TrEMBL:B9R882,TrEMBL:I1JT36;Derives_from=GSCOCT00024659001;Name=Cc10_g01730;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative WEB family protein At1g75720,CC_functional_completeness:complete,CC_gene:At1g75720,CC_gene:At3g51220,CC_gene:At2g17940;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024659001~ Putative WEB family protein At1g75720~ At1g75720~ complete;original_location=join(1250346..1250498%2C1251110..1251610);owner=coffea | |
| 33258 chr10 manual_curation exon 1250346 1250498 . + . Parent=GSCOCT00024659001 | |
| 33259 chr10 manual_curation exon 1251110 1251880 . + . Parent=GSCOCT00024659001 | |
| 33260 chr10 manual_curation CDS 1250346 1250498 . + 0 Parent=GSCOCT00024659001 | |
| 33261 chr10 manual_curation CDS 1251110 1251610 . + 0 Parent=GSCOCT00024659001 | |
| 33262 chr10 manual_curation gene 1252919 1253188 . - . ID=GSCOCG00024660001;Name=Cc10_g01740 | |
| 33263 chr10 manual_curation mRNA 1252919 1253188 . - . ID=GSCOCT00024660001;Parent=GSCOCG00024660001;Name=Cc10_g01740 | |
| 33264 chr10 manual_curation polypeptide 1252919 1253188 . - . ID=GSCOCP00024660001;Dbxref=TrEMBL:B9H4W2,TrEMBL:B9R881,TrEMBL:F6H086;Derives_from=GSCOCT00024660001;Name=Cc10_g01740;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024660001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=complement(1252919..1253188);owner=coffea | |
| 33265 chr10 manual_curation exon 1252919 1253188 . - . Parent=GSCOCT00024660001 | |
| 33266 chr10 manual_curation CDS 1252919 1253188 . - 0 Parent=GSCOCT00024660001 | |
| 33267 chr10 manual_curation gene 1259581 1262185 . - . ID=GSCOCG00024662001;Name=Cc10_g01750 | |
| 33268 chr10 manual_curation mRNA 1259581 1262185 . - . ID=GSCOCT00024662001;Parent=GSCOCG00024662001;Name=Cc10_g01750 | |
| 33269 chr10 manual_curation polypeptide 1259581 1261943 . - . ID=GSCOCP00024662001;Dbxref=InterPro:IPR007087,PROFILE:PS50157,PROSITE:PS00028,TAIR:AT1G75710.1,TAIR:AT4G27240.1,TAIR:AT5G54630.1,TrEMBL:B9GQV9,TrEMBL:B9R880,TrEMBL:F6H081;Derives_from=GSCOCT00024662001;Name=Cc10_g01750;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:C2H2-like zinc finger protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024662001~ C2H2-like zinc finger protein~ unknown_gene~ complete;original_location=complement(join(1261465..1261943%2C1261269..1261369%2C1259581..1260224));owner=coffea | |
| 33270 chr10 manual_curation exon 1259581 1260224 . - . Parent=GSCOCT00024662001 | |
| 33271 chr10 manual_curation exon 1261269 1261369 . - . Parent=GSCOCT00024662001 | |
| 33272 chr10 manual_curation exon 1261465 1262185 . - . Parent=GSCOCT00024662001 | |
| 33273 chr10 manual_curation CDS 1259581 1260224 . - 1 Parent=GSCOCT00024662001 | |
| 33274 chr10 manual_curation CDS 1261269 1261369 . - 2 Parent=GSCOCT00024662001 | |
| 33275 chr10 manual_curation CDS 1261465 1261943 . - 0 Parent=GSCOCT00024662001 | |
| 33276 chr10 manual_curation gene 1266908 1271940 . + . ID=GSCOCG00024663001;Name=Cc10_g01760 | |
| 33277 chr10 manual_curation mRNA 1266908 1271940 . + . ID=GSCOCT00024663001;Parent=GSCOCG00024663001;Name=Cc10_g01760 | |
| 33278 chr10 manual_curation polypeptide 1266908 1271692 . + . ID=GSCOCP00024663001;Dbxref=InterPro:IPR007316,PANTHER:PTHR12945,PFAM:PF04189,SwissProt:Q2T9V5,SwissProt:Q54UB1,SwissProt:Q9UJA5,TAIR:AT2G45730.1,TrEMBL:B9H4W0,TrEMBL:E0CQ45,TrEMBL:G7I755;Derives_from=GSCOCT00024663001;Name=Cc10_g01760;Ontology_term=CC_evidence_code:ISS,GO:0003743,GO:0006413,CC_EC_number:missing_EC_number,PRODUCT:Putative tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6,CC_functional_completeness:complete,CC_gene:trmt6,CC_gene:TRMT6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024663001~ Putative tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6~ trmt6~ complete;original_location=join(1266908..1267035%2C1267161..1267288%2C1268048..1268171%2C1268423..1268504%2C1268577..1268647%2C1269392..1269433%2C1269521..1269645%2C1270376..1270469%2C1270622..1270724%2C1270803..1270984%2C1271065..1271170%2C1271278..1271364%2C1271603..1271692);owner=coffea | |
| 33279 chr10 manual_curation exon 1266908 1267035 . + . Parent=GSCOCT00024663001 | |
| 33280 chr10 manual_curation exon 1267161 1267288 . + . Parent=GSCOCT00024663001 | |
| 33281 chr10 manual_curation exon 1268048 1268171 . + . Parent=GSCOCT00024663001 | |
| 33282 chr10 manual_curation exon 1268423 1268504 . + . Parent=GSCOCT00024663001 | |
| 33283 chr10 manual_curation exon 1268577 1268647 . + . Parent=GSCOCT00024663001 | |
| 33284 chr10 manual_curation exon 1269392 1269433 . + . Parent=GSCOCT00024663001 | |
| 33285 chr10 manual_curation exon 1269521 1269645 . + . Parent=GSCOCT00024663001 | |
| 33286 chr10 manual_curation exon 1270376 1270469 . + . Parent=GSCOCT00024663001 | |
| 33287 chr10 manual_curation exon 1270622 1270724 . + . Parent=GSCOCT00024663001 | |
| 33288 chr10 manual_curation exon 1270803 1270984 . + . Parent=GSCOCT00024663001 | |
| 33289 chr10 manual_curation exon 1271065 1271170 . + . Parent=GSCOCT00024663001 | |
| 33290 chr10 manual_curation exon 1271278 1271364 . + . Parent=GSCOCT00024663001 | |
| 33291 chr10 manual_curation exon 1271603 1271940 . + . Parent=GSCOCT00024663001 | |
| 33292 chr10 manual_curation CDS 1266908 1267035 . + 0 Parent=GSCOCT00024663001 | |
| 33293 chr10 manual_curation CDS 1267161 1267288 . + 2 Parent=GSCOCT00024663001 | |
| 33294 chr10 manual_curation CDS 1268048 1268171 . + 1 Parent=GSCOCT00024663001 | |
| 33295 chr10 manual_curation CDS 1268423 1268504 . + 2 Parent=GSCOCT00024663001 | |
| 33296 chr10 manual_curation CDS 1268577 1268647 . + 0 Parent=GSCOCT00024663001 | |
| 33297 chr10 manual_curation CDS 1269392 1269433 . + 2 Parent=GSCOCT00024663001 | |
| 33298 chr10 manual_curation CDS 1269521 1269645 . + 2 Parent=GSCOCT00024663001 | |
| 33299 chr10 manual_curation CDS 1270376 1270469 . + 1 Parent=GSCOCT00024663001 | |
| 33300 chr10 manual_curation CDS 1270622 1270724 . + 2 Parent=GSCOCT00024663001 | |
| 33301 chr10 manual_curation CDS 1270803 1270984 . + 0 Parent=GSCOCT00024663001 | |
| 33302 chr10 manual_curation CDS 1271065 1271170 . + 2 Parent=GSCOCT00024663001 | |
| 33303 chr10 manual_curation CDS 1271278 1271364 . + 0 Parent=GSCOCT00024663001 | |
| 33304 chr10 manual_curation CDS 1271603 1271692 . + 0 Parent=GSCOCT00024663001 | |
| 33305 chr10 manual_curation gene 1273107 1277527 . + . ID=GSCOCG00024664001;Name=Cc10_g01770 | |
| 33306 chr10 manual_curation mRNA 1273107 1277527 . + . ID=GSCOCT00024664001;Parent=GSCOCG00024664001;Name=Cc10_g01770 | |
| 33307 chr10 manual_curation polypeptide 1273107 1277437 . + . ID=GSCOCP00024664001;Dbxref=GENE3D:G3DSA:1.10.10.10,InterPro:IPR003316,InterPro:IPR011991,InterPro:IPR015633,PANTHER:PTHR12081,PFAM:PF02319,SwissProt:Q9FNY0,SwissProt:Q9FV70,SwissProt:Q9FV71,TAIR:AT1G47870.1,TAIR:AT2G36010.2,TAIR:AT5G22220.2,TrEMBL:B9R878,TrEMBL:F6H080,TrEMBL:I1JT39;Derives_from=GSCOCT00024664001;Name=Cc10_g01770;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0005667,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized protein,CC_functional_completeness:modules,CC_gene:E2FC,CC_gene:E2FB,CC_gene:E2FA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024664001~ Putative Uncharacterized protein~ E2FC~ modules;original_location=join(1273107..1273433%2C1274569..1274734%2C1274821..1274874%2C1275015..1275100%2C1275280..1275368%2C1275442..1275496%2C1276283..1276368%2C1276549..1276597%2C1276678..1276743%2C1276843..1276919%2C1277069..1277240%2C1277363..1277437);owner=coffea | |
| 33308 chr10 manual_curation exon 1273107 1273433 . + . Parent=GSCOCT00024664001 | |
| 33309 chr10 manual_curation exon 1274569 1274734 . + . Parent=GSCOCT00024664001 | |
| 33310 chr10 manual_curation exon 1274821 1274874 . + . Parent=GSCOCT00024664001 | |
| 33311 chr10 manual_curation exon 1275015 1275100 . + . Parent=GSCOCT00024664001 | |
| 33312 chr10 manual_curation exon 1275280 1275368 . + . Parent=GSCOCT00024664001 | |
| 33313 chr10 manual_curation exon 1275442 1275496 . + . Parent=GSCOCT00024664001 | |
| 33314 chr10 manual_curation exon 1276283 1276368 . + . Parent=GSCOCT00024664001 | |
| 33315 chr10 manual_curation exon 1276549 1276597 . + . Parent=GSCOCT00024664001 | |
| 33316 chr10 manual_curation exon 1276678 1276743 . + . Parent=GSCOCT00024664001 | |
| 33317 chr10 manual_curation exon 1276843 1276919 . + . Parent=GSCOCT00024664001 | |
| 33318 chr10 manual_curation exon 1277069 1277240 . + . Parent=GSCOCT00024664001 | |
| 33319 chr10 manual_curation exon 1277363 1277527 . + . Parent=GSCOCT00024664001 | |
| 33320 chr10 manual_curation CDS 1273107 1273433 . + 0 Parent=GSCOCT00024664001 | |
| 33321 chr10 manual_curation CDS 1274569 1274734 . + 0 Parent=GSCOCT00024664001 | |
| 33322 chr10 manual_curation CDS 1274821 1274874 . + 1 Parent=GSCOCT00024664001 | |
| 33323 chr10 manual_curation CDS 1275015 1275100 . + 1 Parent=GSCOCT00024664001 | |
| 33324 chr10 manual_curation CDS 1275280 1275368 . + 0 Parent=GSCOCT00024664001 | |
| 33325 chr10 manual_curation CDS 1275442 1275496 . + 2 Parent=GSCOCT00024664001 | |
| 33326 chr10 manual_curation CDS 1276283 1276368 . + 0 Parent=GSCOCT00024664001 | |
| 33327 chr10 manual_curation CDS 1276549 1276597 . + 2 Parent=GSCOCT00024664001 | |
| 33328 chr10 manual_curation CDS 1276678 1276743 . + 0 Parent=GSCOCT00024664001 | |
| 33329 chr10 manual_curation CDS 1276843 1276919 . + 0 Parent=GSCOCT00024664001 | |
| 33330 chr10 manual_curation CDS 1277069 1277240 . + 2 Parent=GSCOCT00024664001 | |
| 33331 chr10 manual_curation CDS 1277363 1277437 . + 0 Parent=GSCOCT00024664001 | |
| 33332 chr10 manual_curation gene 1277850 1282231 . - . ID=GSCOCG00024665001;Name=Cc10_g01780 | |
| 33333 chr10 manual_curation mRNA 1277850 1282231 . - . ID=GSCOCT00024665001;Parent=GSCOCG00024665001;Name=Cc10_g01780 | |
| 33334 chr10 manual_curation polypeptide 1278507 1280752 . - . ID=GSCOCP00024665001;Dbxref=InterPro:IPR004345,PANTHER:PTHR12300,PFAM:PF03134,SwissProt:Q8LE10,SwissProt:Q8LEM6,SwissProt:Q9LR09,TAIR:AT1G19950.1,TAIR:AT1G75700.1,TAIR:AT5G42560.1,TrEMBL:E0CQ43,TrEMBL:G7J4Q8,TrEMBL:I1K7K3;Derives_from=GSCOCT00024665001;Name=Cc10_g01780;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:HVA22-like protein i,CC_functional_completeness:complete,CC_gene:HVA22I,CC_gene:HVA22H,CC_gene:HVA22G;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024665001~ HVA22-like protein i~ HVA22I~ complete;original_location=complement(join(1280721..1280752%2C1280530..1280628%2C1280389..1280445%2C1280211..1280274%2C1279903..1280109%2C1278507..1278908));owner=coffea | |
| 33335 chr10 manual_curation exon 1281022 1281340 . - . Parent=GSCOCT00024665001 | |
| 33336 chr10 manual_curation exon 1281873 1282231 . - . Parent=GSCOCT00024665001 | |
| 33337 chr10 manual_curation exon 1277850 1278908 . - . Parent=GSCOCT00024665001 | |
| 33338 chr10 manual_curation exon 1279903 1280109 . - . Parent=GSCOCT00024665001 | |
| 33339 chr10 manual_curation exon 1280211 1280274 . - . Parent=GSCOCT00024665001 | |
| 33340 chr10 manual_curation exon 1280389 1280445 . - . Parent=GSCOCT00024665001 | |
| 33341 chr10 manual_curation exon 1280530 1280628 . - . Parent=GSCOCT00024665001 | |
| 33342 chr10 manual_curation exon 1280721 1280761 . - . Parent=GSCOCT00024665001 | |
| 33343 chr10 manual_curation CDS 1278507 1278908 . - 0 Parent=GSCOCT00024665001 | |
| 33344 chr10 manual_curation CDS 1279903 1280109 . - 0 Parent=GSCOCT00024665001 | |
| 33345 chr10 manual_curation CDS 1280211 1280274 . - 2 Parent=GSCOCT00024665001 | |
| 33346 chr10 manual_curation CDS 1280389 1280445 . - 2 Parent=GSCOCT00024665001 | |
| 33347 chr10 manual_curation CDS 1280530 1280628 . - 2 Parent=GSCOCT00024665001 | |
| 33348 chr10 manual_curation CDS 1280721 1280752 . - 0 Parent=GSCOCT00024665001 | |
| 33349 chr10 manual_curation gene 1287040 1289451 . + . ID=GSCOCG00024666001;Name=Cc10_g01790 | |
| 33350 chr10 manual_curation mRNA 1287040 1289451 . + . ID=GSCOCT00024666001;Parent=GSCOCG00024666001;Name=Cc10_g01790 | |
| 33351 chr10 manual_curation polypeptide 1287227 1289173 . + . ID=GSCOCP00024666001;Dbxref=InterPro:IPR001305,SUPERFAMILY:SSF57938,SwissProt:Q8GSJ6,TAIR:AT1G75690.1,TrEMBL:A9PJ50,TrEMBL:B9GQW3,TrEMBL:B9R876;Derives_from=GSCOCT00024666001;Name=Cc10_g01790;Ontology_term=CC_evidence_code:ISS,GO:0006457,GO:0031072,GO:0051082,CC_EC_number:missing_EC_number,PRODUCT:Protein disulfide-isomerase LQY1,CC_functional_completeness:complete,CC_gene:LQY1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024666001~ Protein disulfide-isomerase LQY1~ LQY1~ complete;original_location=join(1287227..1287391%2C1287539..1287622%2C1287801..1287852%2C1288717..1288873%2C1289152..1289173);owner=coffea | |
| 33352 chr10 manual_curation exon 1287040 1287391 . + . Parent=GSCOCT00024666001 | |
| 33353 chr10 manual_curation exon 1287539 1287622 . + . Parent=GSCOCT00024666001 | |
| 33354 chr10 manual_curation exon 1287801 1287852 . + . Parent=GSCOCT00024666001 | |
| 33355 chr10 manual_curation exon 1288717 1288873 . + . Parent=GSCOCT00024666001 | |
| 33356 chr10 manual_curation exon 1289152 1289451 . + . Parent=GSCOCT00024666001 | |
| 33357 chr10 manual_curation CDS 1287227 1287391 . + 0 Parent=GSCOCT00024666001 | |
| 33358 chr10 manual_curation CDS 1287539 1287622 . + 0 Parent=GSCOCT00024666001 | |
| 33359 chr10 manual_curation CDS 1287801 1287852 . + 0 Parent=GSCOCT00024666001 | |
| 33360 chr10 manual_curation CDS 1288717 1288873 . + 1 Parent=GSCOCT00024666001 | |
| 33361 chr10 manual_curation CDS 1289152 1289173 . + 2 Parent=GSCOCT00024666001 | |
| 33362 chr10 manual_curation gene 1290066 1292828 . + . ID=GSCOCG00024668001;Name=Cc10_g01800 | |
| 33363 chr10 manual_curation mRNA 1290066 1292828 . + . ID=GSCOCT00024668001;Parent=GSCOCG00024668001;Name=Cc10_g01800 | |
| 33364 chr10 manual_curation polypeptide 1290212 1292594 . + . ID=GSCOCP00024668001;Dbxref=GENE3D:G3DSA:3.30.950.10,GENE3D:G3DSA:3.40.1010.10,HAMAP:MF_01084,InterPro:IPR000878,InterPro:IPR004551,InterPro:IPR014776,InterPro:IPR014777,PANTHER:PTHR10882,PFAM:PF00590,PIR:PIRSF036432,SUPERFAMILY:SSF53790,SwissProt:O81769,SwissProt:Q75JG8,SwissProt:Q9H2P9,TAIR:AT4G31790.1,TIGRFAMs:TIGR00522,TrEMBL:B9GQW4,TrEMBL:B9R875,TrEMBL:E0CQ41;Derives_from=GSCOCT00024668001;Name=Cc10_g01800;Ontology_term=CC_evidence_code:ISS,GO:0004164,GO:0008152,GO:0008168,GO:0017183,CC_EC_number:2.1.1.98,CC_EC_number:2.1.1.98,PRODUCT:Probable diphthine synthase,CC_functional_completeness:complete,CC_gene:At4g31790,CC_gene:dph5,CC_gene:DPH5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024668001~ Probable diphthine synthase~ At4g31790~ complete;original_location=join(1290212..1290361%2C1290460..1290584%2C1290935..1291164%2C1291751..1291790%2C1291903..1291994%2C1292392..1292594);owner=coffea | |
| 33365 chr10 manual_curation exon 1290066 1290361 . + . Parent=GSCOCT00024668001 | |
| 33366 chr10 manual_curation exon 1290460 1290584 . + . Parent=GSCOCT00024668001 | |
| 33367 chr10 manual_curation exon 1290935 1291164 . + . Parent=GSCOCT00024668001 | |
| 33368 chr10 manual_curation exon 1291751 1291790 . + . Parent=GSCOCT00024668001 | |
| 33369 chr10 manual_curation exon 1291903 1291994 . + . Parent=GSCOCT00024668001 | |
| 33370 chr10 manual_curation exon 1292392 1292828 . + . Parent=GSCOCT00024668001 | |
| 33371 chr10 manual_curation CDS 1290212 1290361 . + 0 Parent=GSCOCT00024668001 | |
| 33372 chr10 manual_curation CDS 1290460 1290584 . + 0 Parent=GSCOCT00024668001 | |
| 33373 chr10 manual_curation CDS 1290935 1291164 . + 2 Parent=GSCOCT00024668001 | |
| 33374 chr10 manual_curation CDS 1291751 1291790 . + 1 Parent=GSCOCT00024668001 | |
| 33375 chr10 manual_curation CDS 1291903 1291994 . + 2 Parent=GSCOCT00024668001 | |
| 33376 chr10 manual_curation CDS 1292392 1292594 . + 1 Parent=GSCOCT00024668001 | |
| 33377 chr10 manual_curation gene 1293034 1295726 . - . ID=GSCOCG00024669001;Name=Cc10_g01810 | |
| 33378 chr10 manual_curation mRNA 1293034 1295726 . - . ID=GSCOCT00024669001;Parent=GSCOCG00024669001;Name=Cc10_g01810 | |
| 33379 chr10 manual_curation polypeptide 1293034 1294087 . - . ID=GSCOCP00024669001;Dbxref=TAIR:AT2G19220.1,TAIR:AT3G11290.1,TAIR:AT5G05800.1,TrEMBL:B9R874,TrEMBL:C6TI34,TrEMBL:F6H078;Derives_from=GSCOCT00024669001;Name=Cc10_g01810;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024669001~ Putative unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).~ unknown_gene~ fragment;original_location=complement(join(1293761..1294087%2C1293456..1293666%2C1293034..1293407));owner=coffea | |
| 33380 chr10 manual_curation exon 1295590 1295726 . - . Parent=GSCOCT00024669001 | |
| 33381 chr10 manual_curation exon 1293034 1293407 . - . Parent=GSCOCT00024669001 | |
| 33382 chr10 manual_curation exon 1293456 1293666 . - . Parent=GSCOCT00024669001 | |
| 33383 chr10 manual_curation exon 1293761 1294091 . - . Parent=GSCOCT00024669001 | |
| 33384 chr10 manual_curation CDS 1293034 1293407 . - 1 Parent=GSCOCT00024669001 | |
| 33385 chr10 manual_curation CDS 1293456 1293666 . - 0 Parent=GSCOCT00024669001 | |
| 33386 chr10 manual_curation CDS 1293761 1294087 . - 0 Parent=GSCOCT00024669001 | |
| 33387 chr10 manual_curation gene 1299485 1304118 . + . ID=GSCOCG00024670001;Name=Cc10_g01820 | |
| 33388 chr10 manual_curation mRNA 1299485 1304118 . + . ID=GSCOCT00024670001;Parent=GSCOCG00024670001;Name=Cc10_g01820 | |
| 33389 chr10 manual_curation polypeptide 1299918 1303962 . + . ID=GSCOCP00024670001;Dbxref=GENE3D:G3DSA:1.50.10.10,InterPro:IPR001701,InterPro:IPR008928,InterPro:IPR012341,InterPro:IPR018221,PANTHER:PTHR22298:SF3,PFAM:PF00759,PROSITE:PS00592,SUPERFAMILY:SSF48208,SwissProt:Q69SG5,SwissProt:Q8LCP6,SwissProt:Q9FXI9,TAIR:AT1G19940.1,TAIR:AT1G75680.1,TAIR:AT4G11050.1,TrEMBL:B9R873,TrEMBL:E0CPM7,TrEMBL:G7J4Q1;Derives_from=GSCOCT00024670001;Name=Cc10_g01820;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,CC_EC_number:3.2.1.4,PRODUCT:Endoglucanase 24,CC_functional_completeness:complete,CC_gene:Os09g0533900,CC_gene:At1g75680,CC_gene:At1g19940;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024670001~ Endoglucanase 24~ Os09g0533900~ complete;original_location=join(1299918..1300134%2C1300915..1301198%2C1301649..1302086%2C1302769..1302910%2C1303320..1303486%2C1303630..1303962);owner=coffea | |
| 33390 chr10 manual_curation exon 1299485 1300134 . + . Parent=GSCOCT00024670001 | |
| 33391 chr10 manual_curation exon 1300915 1301198 . + . Parent=GSCOCT00024670001 | |
| 33392 chr10 manual_curation exon 1301649 1302086 . + . Parent=GSCOCT00024670001 | |
| 33393 chr10 manual_curation exon 1302769 1302910 . + . Parent=GSCOCT00024670001 | |
| 33394 chr10 manual_curation exon 1303320 1303486 . + . Parent=GSCOCT00024670001 | |
| 33395 chr10 manual_curation exon 1303630 1304118 . + . Parent=GSCOCT00024670001 | |
| 33396 chr10 manual_curation CDS 1299918 1300134 . + 0 Parent=GSCOCT00024670001 | |
| 33397 chr10 manual_curation CDS 1300915 1301198 . + 1 Parent=GSCOCT00024670001 | |
| 33398 chr10 manual_curation CDS 1301649 1302086 . + 0 Parent=GSCOCT00024670001 | |
| 33399 chr10 manual_curation CDS 1302769 1302910 . + 0 Parent=GSCOCT00024670001 | |
| 33400 chr10 manual_curation CDS 1303320 1303486 . + 1 Parent=GSCOCT00024670001 | |
| 33401 chr10 manual_curation CDS 1303630 1303962 . + 0 Parent=GSCOCT00024670001 | |
| 33402 chr10 manual_curation gene 1307017 1310277 . - . ID=GSCOCG00024672001;Name=Cc10_g01830 | |
| 33403 chr10 manual_curation mRNA 1307017 1310277 . - . ID=GSCOCT00024672001;Parent=GSCOCG00024672001;Name=Cc10_g01830 | |
| 33404 chr10 manual_curation polypeptide 1307017 1310072 . - . ID=GSCOCP00024672001;Dbxref=InterPro:IPR005269,PFAM:PF03641,SwissProt:B9F166,SwissProt:Q8L8B8,SwissProt:Q8RUN2,TAIR:AT2G28305.1,TAIR:AT3G53450.1,TAIR:AT5G06300.1,TIGRFAMs:TIGR00730,TrEMBL:B9H4V4,TrEMBL:B9R872,TrEMBL:C6TLU1,TrEMBL:F8WLR9,TrEMBL:G7J4P9,TrEMBL:I1JT41,TrEMBL:I1MY23;Derives_from=GSCOCT00024672001;Name=Cc10_g01830;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1,CC_functional_completeness:complete,CC_gene:LOG1,CC_gene:LOG3,CC_gene:LOGL2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024672001~ Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1~ LOG1~ complete;original_location=complement(join(1309935..1310072%2C1309230..1309327%2C1309102..1309132%2C1308517..1308616%2C1307918..1307988%2C1307321..1307464%2C1307017..1307112));owner=coffea | |
| 33405 chr10 manual_curation exon 1307017 1307112 . - . Parent=GSCOCT00024672001 | |
| 33406 chr10 manual_curation exon 1307321 1307464 . - . Parent=GSCOCT00024672001 | |
| 33407 chr10 manual_curation exon 1307918 1307988 . - . Parent=GSCOCT00024672001 | |
| 33408 chr10 manual_curation exon 1308517 1308616 . - . Parent=GSCOCT00024672001 | |
| 33409 chr10 manual_curation exon 1309102 1309132 . - . Parent=GSCOCT00024672001 | |
| 33410 chr10 manual_curation exon 1309230 1309327 . - . Parent=GSCOCT00024672001 | |
| 33411 chr10 manual_curation exon 1309935 1310277 . - . Parent=GSCOCT00024672001 | |
| 33412 chr10 manual_curation CDS 1307017 1307112 . - 0 Parent=GSCOCT00024672001 | |
| 33413 chr10 manual_curation CDS 1307321 1307464 . - 0 Parent=GSCOCT00024672001 | |
| 33414 chr10 manual_curation CDS 1307918 1307988 . - 1 Parent=GSCOCT00024672001 | |
| 33415 chr10 manual_curation CDS 1308517 1308616 . - 0 Parent=GSCOCT00024672001 | |
| 33416 chr10 manual_curation CDS 1309102 1309132 . - 2 Parent=GSCOCT00024672001 | |
| 33417 chr10 manual_curation CDS 1309230 1309327 . - 0 Parent=GSCOCT00024672001 | |
| 33418 chr10 manual_curation CDS 1309935 1310072 . - 0 Parent=GSCOCT00024672001 | |
| 33419 chr10 manual_curation gene 1331626 1340785 . - . ID=GSCOCG00024673001;Name=Cc10_g01840 | |
| 33420 chr10 manual_curation mRNA 1331626 1340785 . - . ID=GSCOCT00024673001;Parent=GSCOCG00024673001;Name=Cc10_g01840 | |
| 33421 chr10 manual_curation polypeptide 1332004 1340672 . - . ID=GSCOCP00024673001;Dbxref=InterPro:IPR001878,InterPro:IPR004859,InterPro:IPR017151,PFAM:PF00098,PFAM:PF03159,PIR:PIRSF037239,PROFILE:PS50158,SMART:SM00343,SwissProt:Q9FQ02,SwissProt:Q9FQ03,SwissProt:Q9U299,TAIR:AT1G54490.1,TAIR:AT1G75660.1,TAIR:AT5G42540.2,TrEMBL:B9R871,TrEMBL:F6H077,TrEMBL:I1MC52;Derives_from=GSCOCT00024673001;Name=Cc10_g01840;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0004527,GO:0004534,GO:0005622,GO:0005634,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:5'-3' exoribonuclease 3,CC_functional_completeness:complete,CC_gene:XRN3,CC_gene:XRN2,CC_gene:xrn-2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024673001~ 5'-3' exoribonuclease 3~ XRN3~ complete;original_location=complement(join(1340469..1340672%2C1339796..1339898%2C1339628..1339704%2C1339351..1339542%2C1339068..1339187%2C1338905..1338967%2C1338379..1338528%2C1338104..1338268%2C1337713..1337790%2C1337531..1337617%2C1336559..1336909%2C1336238..1336333%2C1335837..1335932%2C1334961..1335031%2C1334554..1334682%2C1334402..1334478%2C1334251..1334291%2C1334065..1334139%2C1333828..1333985%2C1333308..1333412%2C1333101..1333176%2C1332786..1332865%2C1332004..1332670));owner=coffea | |
| 33422 chr10 manual_curation exon 1331626 1332670 . - . Parent=GSCOCT00024673001 | |
| 33423 chr10 manual_curation exon 1332786 1332865 . - . Parent=GSCOCT00024673001 | |
| 33424 chr10 manual_curation exon 1333101 1333176 . - . Parent=GSCOCT00024673001 | |
| 33425 chr10 manual_curation exon 1333308 1333412 . - . Parent=GSCOCT00024673001 | |
| 33426 chr10 manual_curation exon 1333828 1333985 . - . Parent=GSCOCT00024673001 | |
| 33427 chr10 manual_curation exon 1334065 1334139 . - . Parent=GSCOCT00024673001 | |
| 33428 chr10 manual_curation exon 1334251 1334291 . - . Parent=GSCOCT00024673001 | |
| 33429 chr10 manual_curation exon 1334402 1334478 . - . Parent=GSCOCT00024673001 | |
| 33430 chr10 manual_curation exon 1334554 1334682 . - . Parent=GSCOCT00024673001 | |
| 33431 chr10 manual_curation exon 1334961 1335031 . - . Parent=GSCOCT00024673001 | |
| 33432 chr10 manual_curation exon 1335837 1335932 . - . Parent=GSCOCT00024673001 | |
| 33433 chr10 manual_curation exon 1336238 1336333 . - . Parent=GSCOCT00024673001 | |
| 33434 chr10 manual_curation exon 1336559 1336909 . - . Parent=GSCOCT00024673001 | |
| 33435 chr10 manual_curation exon 1337531 1337617 . - . Parent=GSCOCT00024673001 | |
| 33436 chr10 manual_curation exon 1337713 1337790 . - . Parent=GSCOCT00024673001 | |
| 33437 chr10 manual_curation exon 1338104 1338268 . - . Parent=GSCOCT00024673001 | |
| 33438 chr10 manual_curation exon 1338379 1338528 . - . Parent=GSCOCT00024673001 | |
| 33439 chr10 manual_curation exon 1338905 1338967 . - . Parent=GSCOCT00024673001 | |
| 33440 chr10 manual_curation exon 1339068 1339187 . - . Parent=GSCOCT00024673001 | |
| 33441 chr10 manual_curation exon 1339351 1339542 . - . Parent=GSCOCT00024673001 | |
| 33442 chr10 manual_curation exon 1339628 1339704 . - . Parent=GSCOCT00024673001 | |
| 33443 chr10 manual_curation exon 1339796 1339898 . - . Parent=GSCOCT00024673001 | |
| 33444 chr10 manual_curation exon 1340469 1340785 . - . Parent=GSCOCT00024673001 | |
| 33445 chr10 manual_curation CDS 1332004 1332670 . - 2 Parent=GSCOCT00024673001 | |
| 33446 chr10 manual_curation CDS 1332786 1332865 . - 0 Parent=GSCOCT00024673001 | |
| 33447 chr10 manual_curation CDS 1333101 1333176 . - 2 Parent=GSCOCT00024673001 | |
| 33448 chr10 manual_curation CDS 1333308 1333412 . - 2 Parent=GSCOCT00024673001 | |
| 33449 chr10 manual_curation CDS 1333828 1333985 . - 0 Parent=GSCOCT00024673001 | |
| 33450 chr10 manual_curation CDS 1334065 1334139 . - 0 Parent=GSCOCT00024673001 | |
| 33451 chr10 manual_curation CDS 1334251 1334291 . - 1 Parent=GSCOCT00024673001 | |
| 33452 chr10 manual_curation CDS 1334402 1334478 . - 2 Parent=GSCOCT00024673001 | |
| 33453 chr10 manual_curation CDS 1334554 1334682 . - 2 Parent=GSCOCT00024673001 | |
| 33454 chr10 manual_curation CDS 1334961 1335031 . - 0 Parent=GSCOCT00024673001 | |
| 33455 chr10 manual_curation CDS 1335837 1335932 . - 0 Parent=GSCOCT00024673001 | |
| 33456 chr10 manual_curation CDS 1336238 1336333 . - 0 Parent=GSCOCT00024673001 | |
| 33457 chr10 manual_curation CDS 1336559 1336909 . - 0 Parent=GSCOCT00024673001 | |
| 33458 chr10 manual_curation CDS 1337531 1337617 . - 0 Parent=GSCOCT00024673001 | |
| 33459 chr10 manual_curation CDS 1337713 1337790 . - 0 Parent=GSCOCT00024673001 | |
| 33460 chr10 manual_curation CDS 1338104 1338268 . - 0 Parent=GSCOCT00024673001 | |
| 33461 chr10 manual_curation CDS 1338379 1338528 . - 0 Parent=GSCOCT00024673001 | |
| 33462 chr10 manual_curation CDS 1338905 1338967 . - 0 Parent=GSCOCT00024673001 | |
| 33463 chr10 manual_curation CDS 1339068 1339187 . - 0 Parent=GSCOCT00024673001 | |
| 33464 chr10 manual_curation CDS 1339351 1339542 . - 0 Parent=GSCOCT00024673001 | |
| 33465 chr10 manual_curation CDS 1339628 1339704 . - 1 Parent=GSCOCT00024673001 | |
| 33466 chr10 manual_curation CDS 1339796 1339898 . - 0 Parent=GSCOCT00024673001 | |
| 33467 chr10 manual_curation CDS 1340469 1340672 . - 0 Parent=GSCOCT00024673001 | |
| 33468 chr10 manual_curation gene 1340846 1347409 . + . ID=GSCOCG00024674001;Name=Cc10_g01850 | |
| 33469 chr10 manual_curation mRNA 1340846 1347409 . + . ID=GSCOCT00024674001;Parent=GSCOCG00024674001;Name=Cc10_g01850 | |
| 33470 chr10 manual_curation polypeptide 1342276 1346825 . + . ID=GSCOCP00024674001;Dbxref=GENE3D:G3DSA:3.40.50.620,InterPro:IPR002650,InterPro:IPR014729,InterPro:IPR015947,PFAM:PF01747,SUPERFAMILY:SSF88697,SwissProt:O23324,SwissProt:Q43870,SwissProt:Q9LIK9,TAIR:AT1G19920.1,TAIR:AT3G22890.1,TAIR:AT4G14680.1,TIGRFAMs:TIGR00339,TrEMBL:A9PGH4,TrEMBL:E0CPM3,TrEMBL:I1LWX5;Derives_from=GSCOCT00024674001;Name=Cc10_g01850;Ontology_term=CC_evidence_code:ISS,GO:0000103,GO:0004781,CC_EC_number:2.7.7.4,PRODUCT:ATP sulfurylase 2,CC_functional_completeness:complete,CC_gene:APS2,CC_gene:APS1,CC_gene:APS3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024674001~ ATP sulfurylase 2~ APS2~ complete;original_location=join(1342276..1342832%2C1344112..1344517%2C1345519..1345779%2C1346470..1346556%2C1346688..1346825);owner=coffea | |
| 33471 chr10 manual_curation exon 1340846 1342832 . + . Parent=GSCOCT00024674001 | |
| 33472 chr10 manual_curation exon 1344112 1344517 . + . Parent=GSCOCT00024674001 | |
| 33473 chr10 manual_curation exon 1345519 1345779 . + . Parent=GSCOCT00024674001 | |
| 33474 chr10 manual_curation exon 1346470 1346556 . + . Parent=GSCOCT00024674001 | |
| 33475 chr10 manual_curation exon 1346688 1347409 . + . Parent=GSCOCT00024674001 | |
| 33476 chr10 manual_curation CDS 1342276 1342832 . + 0 Parent=GSCOCT00024674001 | |
| 33477 chr10 manual_curation CDS 1344112 1344517 . + 2 Parent=GSCOCT00024674001 | |
| 33478 chr10 manual_curation CDS 1345519 1345779 . + 0 Parent=GSCOCT00024674001 | |
| 33479 chr10 manual_curation CDS 1346470 1346556 . + 0 Parent=GSCOCT00024674001 | |
| 33480 chr10 manual_curation CDS 1346688 1346825 . + 0 Parent=GSCOCT00024674001 | |
| 33481 chr10 manual_curation gene 1352872 1353531 . + . ID=GSCOCG00024675001;Name=Cc10_g01860 | |
| 33482 chr10 manual_curation mRNA 1352872 1353531 . + . ID=GSCOCT00024675001;Parent=GSCOCG00024675001;Name=Cc10_g01860 | |
| 33483 chr10 manual_curation polypeptide 1352928 1353245 . + . ID=GSCOCP00024675001;Dbxref=InterPro:IPR003676,PFAM:PF02519,SwissProt:P32295,SwissProt:P33081,SwissProt:P33082,TAIR:AT1G75580.1,TAIR:AT4G34760.1,TAIR:AT4G38860.1,TrEMBL:A5AQT6,TrEMBL:A5CAI9,TrEMBL:B9H0Z6;Derives_from=GSCOCT00024675001;Name=Cc10_g01860;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Auxin-induced protein 15A,CC_functional_completeness:modules,CC_gene:ARG7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024675001~ Auxin-induced protein 15A~ ARG7~ modules;original_location=1352928..1353245;owner=coffea | |
| 33484 chr10 manual_curation exon 1352872 1353531 . + . Parent=GSCOCT00024675001 | |
| 33485 chr10 manual_curation CDS 1352928 1353245 . + 0 Parent=GSCOCT00024675001 | |
| 33486 chr10 manual_curation gene 1359807 1365995 . - . ID=GSCOCG00024676001;Name=Cc10_g01870 | |
| 33487 chr10 manual_curation mRNA 1359807 1365995 . - . ID=GSCOCT00024676001;Parent=GSCOCG00024676001;Name=Cc10_g01870 | |
| 33488 chr10 manual_curation polypeptide 1360469 1365276 . - . ID=GSCOCP00024676001;Dbxref=InterPro:IPR008587,PFAM:PF05911,SwissProt:O65649,SwissProt:Q0WSY2,SwissProt:Q9C698,TAIR:AT1G19835.1,TAIR:AT1G47900.1,TAIR:AT4G36120.1,TrEMBL:A5ASD5,TrEMBL:B9GQX2,TrEMBL:F6H074;Derives_from=GSCOCT00024676001;Name=Cc10_g01870;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Filament-like plant protein 4,CC_functional_completeness:complete,CC_gene:FPP4,CC_gene:FPP6,CC_gene:FPP5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024676001~ Filament-like plant protein 4~ FPP4~ complete;original_location=complement(join(1365160..1365276%2C1364351..1364579%2C1361833..1364248%2C1361359..1361401%2C1360469..1360915));owner=coffea | |
| 33489 chr10 manual_curation exon 1359807 1360915 . - . Parent=GSCOCT00024676001 | |
| 33490 chr10 manual_curation exon 1361359 1361401 . - . Parent=GSCOCT00024676001 | |
| 33491 chr10 manual_curation exon 1361833 1364248 . - . Parent=GSCOCT00024676001 | |
| 33492 chr10 manual_curation exon 1364351 1364579 . - . Parent=GSCOCT00024676001 | |
| 33493 chr10 manual_curation exon 1365160 1365995 . - . Parent=GSCOCT00024676001 | |
| 33494 chr10 manual_curation CDS 1360469 1360915 . - 0 Parent=GSCOCT00024676001 | |
| 33495 chr10 manual_curation CDS 1361359 1361401 . - 2 Parent=GSCOCT00024676001 | |
| 33496 chr10 manual_curation CDS 1361833 1364248 . - 1 Parent=GSCOCT00024676001 | |
| 33497 chr10 manual_curation CDS 1364351 1364579 . - 0 Parent=GSCOCT00024676001 | |
| 33498 chr10 manual_curation CDS 1365160 1365276 . - 0 Parent=GSCOCT00024676001 | |
| 33499 chr10 manual_curation gene 1387673 1388119 . - . ID=GSCOCG00024679001;Name=Cc10_g01880 | |
| 33500 chr10 manual_curation mRNA 1387673 1388119 . - . ID=GSCOCT00024679001;Parent=GSCOCG00024679001;Name=Cc10_g01880 | |
| 33501 chr10 manual_curation polypeptide 1387673 1388119 . - . ID=GSCOCP00024679001;Dbxref=InterPro:IPR003676,PFAM:PF02519,SwissProt:P32295,SwissProt:P33083,TAIR:AT1G19840.1,TAIR:AT1G75590.1,TAIR:AT5G10990.1,TrEMBL:B9H4U8,TrEMBL:B9R868,TrEMBL:F6H073;Derives_from=GSCOCT00024679001;Name=Cc10_g01880;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Auxin-induced protein 6B,CC_functional_completeness:modules,CC_gene:ARG7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024679001~ Putative Auxin-induced protein 6B~ ARG7~ modules;original_location=complement(1387673..1388119);owner=coffea | |
| 33502 chr10 manual_curation exon 1387673 1388119 . - . Parent=GSCOCT00024679001 | |
| 33503 chr10 manual_curation CDS 1387673 1388119 . - 0 Parent=GSCOCT00024679001 | |
| 33504 chr10 manual_curation gene 1399526 1403768 . - . ID=GSCOCG00024681001;Name=Cc10_g01890 | |
| 33505 chr10 manual_curation mRNA 1399526 1403768 . - . ID=GSCOCT00024681001;Parent=GSCOCG00024681001;Name=Cc10_g01890 | |
| 33506 chr10 manual_curation polypeptide 1399969 1403672 . - . ID=GSCOCP00024681001;Dbxref=TAIR:AT1G75670.1,TrEMBL:B9R867,TrEMBL:C6T3P4,TrEMBL:E0CPL7;Derives_from=GSCOCT00024681001;Name=Cc10_g01890;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:DNA-directed RNA polymerases,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024681001~ DNA-directed RNA polymerases~ unknown_gene~ complete;original_location=complement(join(1403563..1403672%2C1401724..1401875%2C1401429..1401538%2C1401194..1401279%2C1400247..1400351%2C1399969..1400110));owner=coffea | |
| 33507 chr10 manual_curation exon 1399526 1400110 . - . Parent=GSCOCT00024681001 | |
| 33508 chr10 manual_curation exon 1400247 1400351 . - . Parent=GSCOCT00024681001 | |
| 33509 chr10 manual_curation exon 1401194 1401279 . - . Parent=GSCOCT00024681001 | |
| 33510 chr10 manual_curation exon 1401429 1401538 . - . Parent=GSCOCT00024681001 | |
| 33511 chr10 manual_curation exon 1401724 1401875 . - . Parent=GSCOCT00024681001 | |
| 33512 chr10 manual_curation exon 1403563 1403768 . - . Parent=GSCOCT00024681001 | |
| 33513 chr10 manual_curation CDS 1399969 1400110 . - 2 Parent=GSCOCT00024681001 | |
| 33514 chr10 manual_curation CDS 1400247 1400351 . - 2 Parent=GSCOCT00024681001 | |
| 33515 chr10 manual_curation CDS 1401194 1401279 . - 0 Parent=GSCOCT00024681001 | |
| 33516 chr10 manual_curation CDS 1401429 1401538 . - 1 Parent=GSCOCT00024681001 | |
| 33517 chr10 manual_curation CDS 1401724 1401875 . - 2 Parent=GSCOCT00024681001 | |
| 33518 chr10 manual_curation CDS 1403563 1403672 . - 0 Parent=GSCOCT00024681001 | |
| 33519 chr10 manual_curation gene 1416369 1423440 . + . ID=GSCOCG00024683001;Name=Cc10_g01900 | |
| 33520 chr10 manual_curation mRNA 1416369 1423440 . + . ID=GSCOCT00024683001;Parent=GSCOCG00024683001;Name=Cc10_g01900 | |
| 33521 chr10 manual_curation polypeptide 1417043 1423032 . + . ID=GSCOCP00024683001;Dbxref=InterPro:IPR003311,InterPro:IPR003340,InterPro:IPR010525,InterPro:IPR011525,PFAM:PF02309,PFAM:PF02362,PFAM:PF06507,PROFILE:PS50863,PROFILE:PS50962,SwissProt:P93024,SwissProt:Q01K26,SwissProt:Q8S983,TAIR:AT1G19220.1,TAIR:AT1G19850.1,TAIR:AT1G30330.2,TrEMBL:D9IVB5,TrEMBL:F6H071,TrEMBL:Q8GT89;Derives_from=GSCOCT00024683001;Name=Cc10_g01900;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0005634,GO:0009725,GO:0045449,GO:0046983,CC_EC_number:missing_EC_number,PRODUCT:Auxin response factor 5,CC_functional_completeness:complete,CC_gene:ARF5,CC_gene:ARF11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024683001~ Auxin response factor 5~ ARF5~ complete;original_location=join(1417043..1417148%2C1417321..1417433%2C1418194..1418292%2C1418395..1418451%2C1418597..1418749%2C1418856..1418940%2C1419340..1419430%2C1419808..1419972%2C1420070..1420192%2C1420276..1420351%2C1420464..1420599%2C1420680..1422004%2C1422467..1422657%2C1422903..1423032);owner=coffea | |
| 33522 chr10 manual_curation exon 1416369 1416832 . + . Parent=GSCOCT00024683001 | |
| 33523 chr10 manual_curation exon 1416972 1417148 . + . Parent=GSCOCT00024683001 | |
| 33524 chr10 manual_curation exon 1417321 1417433 . + . Parent=GSCOCT00024683001 | |
| 33525 chr10 manual_curation exon 1418194 1418292 . + . Parent=GSCOCT00024683001 | |
| 33526 chr10 manual_curation exon 1418395 1418451 . + . Parent=GSCOCT00024683001 | |
| 33527 chr10 manual_curation exon 1418597 1418749 . + . Parent=GSCOCT00024683001 | |
| 33528 chr10 manual_curation exon 1418856 1418940 . + . Parent=GSCOCT00024683001 | |
| 33529 chr10 manual_curation exon 1419340 1419430 . + . Parent=GSCOCT00024683001 | |
| 33530 chr10 manual_curation exon 1419808 1419972 . + . Parent=GSCOCT00024683001 | |
| 33531 chr10 manual_curation exon 1420070 1420192 . + . Parent=GSCOCT00024683001 | |
| 33532 chr10 manual_curation exon 1420276 1420351 . + . Parent=GSCOCT00024683001 | |
| 33533 chr10 manual_curation exon 1420464 1420599 . + . Parent=GSCOCT00024683001 | |
| 33534 chr10 manual_curation exon 1420680 1422004 . + . Parent=GSCOCT00024683001 | |
| 33535 chr10 manual_curation exon 1422467 1422657 . + . Parent=GSCOCT00024683001 | |
| 33536 chr10 manual_curation exon 1422903 1423440 . + . Parent=GSCOCT00024683001 | |
| 33537 chr10 manual_curation CDS 1417043 1417148 . + 0 Parent=GSCOCT00024683001 | |
| 33538 chr10 manual_curation CDS 1417321 1417433 . + 1 Parent=GSCOCT00024683001 | |
| 33539 chr10 manual_curation CDS 1418194 1418292 . + 0 Parent=GSCOCT00024683001 | |
| 33540 chr10 manual_curation CDS 1418395 1418451 . + 0 Parent=GSCOCT00024683001 | |
| 33541 chr10 manual_curation CDS 1418597 1418749 . + 0 Parent=GSCOCT00024683001 | |
| 33542 chr10 manual_curation CDS 1418856 1418940 . + 0 Parent=GSCOCT00024683001 | |
| 33543 chr10 manual_curation CDS 1419340 1419430 . + 1 Parent=GSCOCT00024683001 | |
| 33544 chr10 manual_curation CDS 1419808 1419972 . + 2 Parent=GSCOCT00024683001 | |
| 33545 chr10 manual_curation CDS 1420070 1420192 . + 2 Parent=GSCOCT00024683001 | |
| 33546 chr10 manual_curation CDS 1420276 1420351 . + 2 Parent=GSCOCT00024683001 | |
| 33547 chr10 manual_curation CDS 1420464 1420599 . + 0 Parent=GSCOCT00024683001 | |
| 33548 chr10 manual_curation CDS 1420680 1422004 . + 1 Parent=GSCOCT00024683001 | |
| 33549 chr10 manual_curation CDS 1422467 1422657 . + 0 Parent=GSCOCT00024683001 | |
| 33550 chr10 manual_curation CDS 1422903 1423032 . + 2 Parent=GSCOCT00024683001 | |
| 33551 chr10 manual_curation gene 1425672 1426934 . - . ID=GSCOCG00024684001;Name=Cc10_g01910 | |
| 33552 chr10 manual_curation mRNA 1425672 1426934 . - . ID=GSCOCT00024684001;Parent=GSCOCG00024684001;Name=Cc10_g01910 | |
| 33553 chr10 manual_curation polypeptide 1425672 1426934 . - . ID=GSCOCP00024684001;Dbxref=InterPro:IPR004159,PFAM:PF03141,TAIR:AT3G05390.1,TAIR:AT3G27230.1,TAIR:AT5G40830.1,TrEMBL:B9H4K5,TrEMBL:B9R864,TrEMBL:F6H070;Derives_from=GSCOCT00024684001;Name=Cc10_g01910;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024684001~ S-adenosyl-L-methionine-dependent methyltransferases superfamily protein~ unknown_gene~ complete;original_location=complement(1425672..1426934);owner=coffea | |
| 33554 chr10 manual_curation exon 1425672 1426934 . - . Parent=GSCOCT00024684001 | |
| 33555 chr10 manual_curation CDS 1425672 1426934 . - 0 Parent=GSCOCT00024684001 | |
| 33556 chr10 manual_curation gene 1436607 1441073 . + . ID=GSCOCG00024685001;Name=Cc10_g01920 | |
| 33557 chr10 manual_curation mRNA 1436607 1441073 . + . ID=GSCOCT00024685001;Parent=GSCOCG00024685001;Name=Cc10_g01920 | |
| 33558 chr10 manual_curation polypeptide 1436736 1440732 . + . ID=GSCOCP00024685001;Dbxref=InterPro:IPR006571,SMART:SM00584,TAIR:AT5G39590.1,TrEMBL:B9R862,TrEMBL:E0CPL2,TrEMBL:Q8GT91;Derives_from=GSCOCT00024685001;Name=Cc10_g01920;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:TLD-domain containing nucleolar protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024685001~ TLD-domain containing nucleolar protein~ unknown_gene~ complete;original_location=join(1436736..1436906%2C1437403..1438020%2C1438198..1438305%2C1438380..1438433%2C1438615..1438802%2C1439175..1439398%2C1439539..1439738%2C1440410..1440535%2C1440634..1440732);owner=coffea | |
| 33559 chr10 manual_curation exon 1436607 1436906 . + . Parent=GSCOCT00024685001 | |
| 33560 chr10 manual_curation exon 1437403 1438020 . + . Parent=GSCOCT00024685001 | |
| 33561 chr10 manual_curation exon 1438198 1438305 . + . Parent=GSCOCT00024685001 | |
| 33562 chr10 manual_curation exon 1438380 1438433 . + . Parent=GSCOCT00024685001 | |
| 33563 chr10 manual_curation exon 1438615 1438802 . + . Parent=GSCOCT00024685001 | |
| 33564 chr10 manual_curation exon 1439175 1439398 . + . Parent=GSCOCT00024685001 | |
| 33565 chr10 manual_curation exon 1439539 1439738 . + . Parent=GSCOCT00024685001 | |
| 33566 chr10 manual_curation exon 1440410 1440535 . + . Parent=GSCOCT00024685001 | |
| 33567 chr10 manual_curation exon 1440634 1441073 . + . Parent=GSCOCT00024685001 | |
| 33568 chr10 manual_curation CDS 1436736 1436906 . + 0 Parent=GSCOCT00024685001 | |
| 33569 chr10 manual_curation CDS 1437403 1438020 . + 0 Parent=GSCOCT00024685001 | |
| 33570 chr10 manual_curation CDS 1438198 1438305 . + 0 Parent=GSCOCT00024685001 | |
| 33571 chr10 manual_curation CDS 1438380 1438433 . + 0 Parent=GSCOCT00024685001 | |
| 33572 chr10 manual_curation CDS 1438615 1438802 . + 0 Parent=GSCOCT00024685001 | |
| 33573 chr10 manual_curation CDS 1439175 1439398 . + 2 Parent=GSCOCT00024685001 | |
| 33574 chr10 manual_curation CDS 1439539 1439738 . + 1 Parent=GSCOCT00024685001 | |
| 33575 chr10 manual_curation CDS 1440410 1440535 . + 0 Parent=GSCOCT00024685001 | |
| 33576 chr10 manual_curation CDS 1440634 1440732 . + 0 Parent=GSCOCT00024685001 | |
| 33577 chr10 manual_curation gene 1441359 1443624 . - . ID=GSCOCG00024686001;Name=Cc10_g01930 | |
| 33578 chr10 manual_curation mRNA 1441359 1443624 . - . ID=GSCOCT00024686001;Parent=GSCOCG00024686001;Name=Cc10_g01930 | |
| 33579 chr10 manual_curation polypeptide 1441566 1443485 . - . ID=GSCOCP00024686001;Dbxref=InterPro:IPR019716,PFAM:PF10780,TAIR:AT5G39600.1,TrEMBL:B9I3Z7,TrEMBL:B9RUQ9,TrEMBL:E0CPL1;Derives_from=GSCOCT00024686001;Name=Cc10_g01930;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:CONTAINS InterPro DOMAIN/s,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024686001~ CONTAINS InterPro DOMAIN/s: Ribosomal protein L53%2C mitochondrial (InterPro:IPR019716)%3B Has 50 Blast hits to 50 proteins in 19 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 6%3B Fungi - 0%3B Plants - 42%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(1443129..1443485%2C1441566..1441595));owner=coffea | |
| 33580 chr10 manual_curation exon 1441359 1441595 . - . Parent=GSCOCT00024686001 | |
| 33581 chr10 manual_curation exon 1443129 1443624 . - . Parent=GSCOCT00024686001 | |
| 33582 chr10 manual_curation CDS 1441566 1441595 . - 0 Parent=GSCOCT00024686001 | |
| 33583 chr10 manual_curation CDS 1443129 1443485 . - 0 Parent=GSCOCT00024686001 | |
| 33584 chr10 manual_curation gene 1444928 1450508 . - . ID=GSCOCG00024687001;Name=Cc10_g01940 | |
| 33585 chr10 manual_curation mRNA 1444928 1450508 . - . ID=GSCOCT00024687001;Parent=GSCOCG00024687001;Name=Cc10_g01940 | |
| 33586 chr10 manual_curation polypeptide 1444928 1450176 . - . ID=GSCOCP00024687001;Dbxref=InterPro:IPR000571,PROFILE:PS50103,SwissProt:Q56XU4,SwissProt:Q7XM16,SwissProt:Q9FH61,TAIR:AT1G19860.1,TAIR:AT3G51180.1,TAIR:AT5G66270.1,TrEMBL:B9R861,TrEMBL:F6H069,TrEMBL:Q8GT93;Derives_from=GSCOCT00024687001;Name=Cc10_g01940;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative Zinc finger CCCH domain-containing protein 6,CC_functional_completeness:complete,CC_gene:At1g19860,CC_gene:Os04g0663200,CC_gene:At5g66270;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024687001~ Putative Zinc finger CCCH domain-containing protein 6~ At1g19860~ complete;original_location=complement(join(1450117..1450176%2C1446933..1447142%2C1446143..1446267%2C1445584..1446044%2C1444928..1445496));owner=coffea | |
| 33587 chr10 manual_curation exon 1444928 1445496 . - . Parent=GSCOCT00024687001 | |
| 33588 chr10 manual_curation exon 1445584 1446044 . - . Parent=GSCOCT00024687001 | |
| 33589 chr10 manual_curation exon 1446143 1446267 . - . Parent=GSCOCT00024687001 | |
| 33590 chr10 manual_curation exon 1446933 1447142 . - . Parent=GSCOCT00024687001 | |
| 33591 chr10 manual_curation exon 1450117 1450508 . - . Parent=GSCOCT00024687001 | |
| 33592 chr10 manual_curation CDS 1444928 1445496 . - 1 Parent=GSCOCT00024687001 | |
| 33593 chr10 manual_curation CDS 1445584 1446044 . - 2 Parent=GSCOCT00024687001 | |
| 33594 chr10 manual_curation CDS 1446143 1446267 . - 0 Parent=GSCOCT00024687001 | |
| 33595 chr10 manual_curation CDS 1446933 1447142 . - 0 Parent=GSCOCT00024687001 | |
| 33596 chr10 manual_curation CDS 1450117 1450176 . - 0 Parent=GSCOCT00024687001 | |
| 33597 chr10 manual_curation gene 1453030 1459637 . - . ID=GSCOCG00024688001;Name=Cc10_g01950 | |
| 33598 chr10 manual_curation mRNA 1453030 1459637 . - . ID=GSCOCT00024688001;Parent=GSCOCG00024688001;Name=Cc10_g01950 | |
| 33599 chr10 manual_curation polypeptide 1453425 1459334 . - . ID=GSCOCP00024688001;Dbxref=InterPro:IPR000048,PFAM:PF00612,PROFILE:PS50096,SMART:SM00015,SwissProt:Q8L4D8,SwissProt:Q9FXI5,TAIR:AT1G18840.1,TAIR:AT1G19870.1,TAIR:AT1G74690.1,TrEMBL:B9GQY2,TrEMBL:B9R858,TrEMBL:F6H068;Derives_from=GSCOCT00024688001;Name=Cc10_g01950;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein IQ-DOMAIN 32,CC_functional_completeness:fragment,CC_gene:IQD32,CC_gene:IQD31;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024688001~ Putative Protein IQ-DOMAIN 32~ IQD32~ fragment;original_location=complement(join(1459242..1459334%2C1456227..1456556%2C1455928..1456152%2C1455454..1455531%2C1453671..1455342%2C1453425..1453444));owner=coffea | |
| 33600 chr10 manual_curation exon 1453030 1453444 . - . Parent=GSCOCT00024688001 | |
| 33601 chr10 manual_curation exon 1453671 1455342 . - . Parent=GSCOCT00024688001 | |
| 33602 chr10 manual_curation exon 1455454 1455531 . - . Parent=GSCOCT00024688001 | |
| 33603 chr10 manual_curation exon 1455928 1456152 . - . Parent=GSCOCT00024688001 | |
| 33604 chr10 manual_curation exon 1456227 1456556 . - . Parent=GSCOCT00024688001 | |
| 33605 chr10 manual_curation exon 1459242 1459637 . - . Parent=GSCOCT00024688001 | |
| 33606 chr10 manual_curation CDS 1453425 1453444 . - 1 Parent=GSCOCT00024688001 | |
| 33607 chr10 manual_curation CDS 1453671 1455342 . - 0 Parent=GSCOCT00024688001 | |
| 33608 chr10 manual_curation CDS 1455454 1455531 . - 0 Parent=GSCOCT00024688001 | |
| 33609 chr10 manual_curation CDS 1455928 1456152 . - 0 Parent=GSCOCT00024688001 | |
| 33610 chr10 manual_curation CDS 1456227 1456556 . - 0 Parent=GSCOCT00024688001 | |
| 33611 chr10 manual_curation CDS 1459242 1459334 . - 0 Parent=GSCOCT00024688001 | |
| 33612 chr10 manual_curation gene 1467756 1473617 . - . ID=GSCOCG00024689001;Name=Cc10_g01960 | |
| 33613 chr10 manual_curation mRNA 1467756 1473617 . - . ID=GSCOCT00024689001;Parent=GSCOCG00024689001;Name=Cc10_g01960 | |
| 33614 chr10 manual_curation polypeptide 1468035 1473350 . - . ID=GSCOCP00024689001;Dbxref=GENE3D:G3DSA:2.130.10.30,InterPro:IPR000408,InterPro:IPR009091,PFAM:PF00415,PRINTS:PR00633,PROFILE:PS50012,PROSITE:PS00626,SUPERFAMILY:SSF50985,SwissProt:Q52KW8,SwissProt:Q8BK67,SwissProt:Q9P258,TAIR:AT1G19880.1,TAIR:AT5G12350.1,TAIR:AT5G63860.1,TrEMBL:B9GQY9,TrEMBL:B9H4J9,TrEMBL:E0CPK0;Derives_from=GSCOCT00024689001;Name=Cc10_g01960;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein RCC2,CC_functional_completeness:modules,CC_gene:RCC2,CC_gene:Rcc2,CC_gene:rcc2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024689001~ Putative Protein RCC2~ RCC2~ modules;original_location=complement(join(1473158..1473350%2C1472741..1472802%2C1472569..1472636%2C1472199..1472320%2C1471860..1471965%2C1471714..1471765%2C1471125..1471242%2C1470979..1471009%2C1470852..1470875%2C1470607..1470731%2C1470206..1470287%2C1469662..1469784%2C1469515..1469568%2C1469358..1469427%2C1468637..1468670%2C1468035..1468369));owner=coffea | |
| 33615 chr10 manual_curation exon 1473467 1473617 . - . Parent=GSCOCT00024689001 | |
| 33616 chr10 manual_curation exon 1467756 1468369 . - . Parent=GSCOCT00024689001 | |
| 33617 chr10 manual_curation exon 1468637 1468670 . - . Parent=GSCOCT00024689001 | |
| 33618 chr10 manual_curation exon 1469358 1469427 . - . Parent=GSCOCT00024689001 | |
| 33619 chr10 manual_curation exon 1469515 1469568 . - . Parent=GSCOCT00024689001 | |
| 33620 chr10 manual_curation exon 1469662 1469784 . - . Parent=GSCOCT00024689001 | |
| 33621 chr10 manual_curation exon 1470206 1470287 . - . Parent=GSCOCT00024689001 | |
| 33622 chr10 manual_curation exon 1470607 1470731 . - . Parent=GSCOCT00024689001 | |
| 33623 chr10 manual_curation exon 1470852 1470875 . - . Parent=GSCOCT00024689001 | |
| 33624 chr10 manual_curation exon 1470979 1471009 . - . Parent=GSCOCT00024689001 | |
| 33625 chr10 manual_curation exon 1471125 1471242 . - . Parent=GSCOCT00024689001 | |
| 33626 chr10 manual_curation exon 1471714 1471765 . - . Parent=GSCOCT00024689001 | |
| 33627 chr10 manual_curation exon 1471860 1471965 . - . Parent=GSCOCT00024689001 | |
| 33628 chr10 manual_curation exon 1472199 1472320 . - . Parent=GSCOCT00024689001 | |
| 33629 chr10 manual_curation exon 1472569 1472636 . - . Parent=GSCOCT00024689001 | |
| 33630 chr10 manual_curation exon 1472741 1472802 . - . Parent=GSCOCT00024689001 | |
| 33631 chr10 manual_curation exon 1473158 1473364 . - . Parent=GSCOCT00024689001 | |
| 33632 chr10 manual_curation CDS 1468035 1468369 . - 1 Parent=GSCOCT00024689001 | |
| 33633 chr10 manual_curation CDS 1468637 1468670 . - 0 Parent=GSCOCT00024689001 | |
| 33634 chr10 manual_curation CDS 1469358 1469427 . - 2 Parent=GSCOCT00024689001 | |
| 33635 chr10 manual_curation CDS 1469515 1469568 . - 2 Parent=GSCOCT00024689001 | |
| 33636 chr10 manual_curation CDS 1469662 1469784 . - 2 Parent=GSCOCT00024689001 | |
| 33637 chr10 manual_curation CDS 1470206 1470287 . - 1 Parent=GSCOCT00024689001 | |
| 33638 chr10 manual_curation CDS 1470607 1470731 . - 2 Parent=GSCOCT00024689001 | |
| 33639 chr10 manual_curation CDS 1470852 1470875 . - 2 Parent=GSCOCT00024689001 | |
| 33640 chr10 manual_curation CDS 1470979 1471009 . - 1 Parent=GSCOCT00024689001 | |
| 33641 chr10 manual_curation CDS 1471125 1471242 . - 0 Parent=GSCOCT00024689001 | |
| 33642 chr10 manual_curation CDS 1471714 1471765 . - 2 Parent=GSCOCT00024689001 | |
| 33643 chr10 manual_curation CDS 1471860 1471965 . - 1 Parent=GSCOCT00024689001 | |
| 33644 chr10 manual_curation CDS 1472199 1472320 . - 2 Parent=GSCOCT00024689001 | |
| 33645 chr10 manual_curation CDS 1472569 1472636 . - 0 Parent=GSCOCT00024689001 | |
| 33646 chr10 manual_curation CDS 1472741 1472802 . - 1 Parent=GSCOCT00024689001 | |
| 33647 chr10 manual_curation CDS 1473158 1473350 . - 0 Parent=GSCOCT00024689001 | |
| 33648 chr10 manual_curation gene 1476860 1480623 . - . ID=GSCOCG00024690001;Name=Cc10_g01970 | |
| 33649 chr10 manual_curation mRNA 1476860 1480623 . - . ID=GSCOCT00024690001;Parent=GSCOCG00024690001;Name=Cc10_g01970 | |
| 33650 chr10 manual_curation polypeptide 1477317 1479983 . - . ID=GSCOCP00024690001;Dbxref=InterPro:IPR004827,InterPro:IPR011616,PFAM:PF00170,PROFILE:PS50217,SMART:SM00338,SwissProt:Q69IL4,SwissProt:Q6S4P4,SwissProt:Q9MA75,TAIR:AT1G43700.1,TAIR:AT2G21230.3,TAIR:AT4G38900.1,TrEMBL:F6I181,TrEMBL:O81998,TrEMBL:Q43530;Derives_from=GSCOCT00024690001;Name=Cc10_g01970;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0043565,GO:0046983,CC_EC_number:missing_EC_number,PRODUCT:Putative Basic-leucine zipper (bZIP) transcription factor family protein,CC_functional_completeness:fragment,CC_gene:RF2b,CC_gene:RF2a,CC_gene:VIP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024690001~ Putative Basic-leucine zipper (bZIP) transcription factor family protein~ RF2b~ fragment;original_location=complement(join(1479767..1479983%2C1479521..1479730%2C1478986..1479427%2C1478756..1478888%2C1478518..1478602%2C1477317..1477534));owner=coffea | |
| 33651 chr10 manual_curation exon 1480438 1480623 . - . Parent=GSCOCT00024690001 | |
| 33652 chr10 manual_curation exon 1476860 1477534 . - . Parent=GSCOCT00024690001 | |
| 33653 chr10 manual_curation exon 1478518 1478602 . - . Parent=GSCOCT00024690001 | |
| 33654 chr10 manual_curation exon 1478756 1478888 . - . Parent=GSCOCT00024690001 | |
| 33655 chr10 manual_curation exon 1478986 1479427 . - . Parent=GSCOCT00024690001 | |
| 33656 chr10 manual_curation exon 1479521 1479730 . - . Parent=GSCOCT00024690001 | |
| 33657 chr10 manual_curation exon 1479767 1480128 . - . Parent=GSCOCT00024690001 | |
| 33658 chr10 manual_curation CDS 1477317 1477534 . - 1 Parent=GSCOCT00024690001 | |
| 33659 chr10 manual_curation CDS 1478518 1478602 . - 0 Parent=GSCOCT00024690001 | |
| 33660 chr10 manual_curation CDS 1478756 1478888 . - 2 Parent=GSCOCT00024690001 | |
| 33661 chr10 manual_curation CDS 1478986 1479427 . - 1 Parent=GSCOCT00024690001 | |
| 33662 chr10 manual_curation CDS 1479521 1479730 . - 1 Parent=GSCOCT00024690001 | |
| 33663 chr10 manual_curation CDS 1479767 1479983 . - 0 Parent=GSCOCT00024690001 | |
| 33664 chr10 manual_curation gene 1485884 1487496 . + . ID=GSCOCG00024693001;Name=Cc10_g01980 | |
| 33665 chr10 manual_curation mRNA 1485884 1487496 . + . ID=GSCOCT00024693001;Parent=GSCOCG00024693001;Name=Cc10_g01980 | |
| 33666 chr10 manual_curation polypeptide 1485884 1487040 . + . ID=GSCOCP00024693001;Dbxref=InterPro:IPR010409,PFAM:PF06217,SwissProt:Q5VSA8,SwissProt:Q8L999,SwissProt:Q8S8C6,TAIR:AT2G21240.1,TAIR:AT4G38910.2,TAIR:AT5G42520.1,TrEMBL:B9R849,TrEMBL:H1ZN85,TrEMBL:I1JT52;Derives_from=GSCOCT00024693001;Name=Cc10_g01980;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein BASIC PENTACYSTEINE6,CC_functional_completeness:complete,CC_gene:BPC6,CC_gene:Os06g0130600,CC_gene:BPC4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024693001~ Protein BASIC PENTACYSTEINE6~ BPC6~ complete;original_location=join(1485884..1485937%2C1486096..1487040);owner=coffea | |
| 33667 chr10 manual_curation exon 1485884 1485937 . + . Parent=GSCOCT00024693001 | |
| 33668 chr10 manual_curation exon 1486096 1487496 . + . Parent=GSCOCT00024693001 | |
| 33669 chr10 manual_curation CDS 1485884 1485937 . + 0 Parent=GSCOCT00024693001 | |
| 33670 chr10 manual_curation CDS 1486096 1487040 . + 0 Parent=GSCOCT00024693001 | |
| 33671 chr10 manual_curation gene 1491364 1492706 . + . ID=GSCOCG00024694001;Name=Cc10_g01990 | |
| 33672 chr10 manual_curation mRNA 1491364 1492706 . + . ID=GSCOCT00024694001;Parent=GSCOCG00024694001;Name=Cc10_g01990 | |
| 33673 chr10 manual_curation polypeptide 1491585 1492325 . + . ID=GSCOCP00024694001;Dbxref=GENE3D:G3DSA:1.10.20.10,InterPro:IPR000164,InterPro:IPR007125,InterPro:IPR009072,PANTHER:PTHR11426,PFAM:PF00125,PRINTS:PR00622,PROSITE:PS00322,PROSITE:PS00959,SMART:SM00428,SUPERFAMILY:SSF47113,SwissProt:Q711T2,SwissProt:Q71H73,SwissProt:Q76N23,TAIR:AT4G40040.1,TAIR:AT5G10980.1,TrEMBL:A5BX39,TrEMBL:Q1EMR7,TrEMBL:Q3YMQ6,TrEMBL:Q3ZDK1,TrEMBL:Q6LB28;Derives_from=GSCOCT00024694001;Name=Cc10_g01990;Ontology_term=CC_evidence_code:ISS,GO:0000786,GO:0003677,GO:0006334,CC_EC_number:missing_EC_number,PRODUCT:Histone H3.3,CC_functional_completeness:complete,CC_gene:H3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024694001~ Histone H3.3~ H3~ complete;original_location=join(1491585..1491656%2C1491776..1491852%2C1491959..1492049%2C1492155..1492325);owner=coffea | |
| 33674 chr10 manual_curation exon 1491364 1491477 . + . Parent=GSCOCT00024694001 | |
| 33675 chr10 manual_curation exon 1491572 1491656 . + . Parent=GSCOCT00024694001 | |
| 33676 chr10 manual_curation exon 1491776 1491852 . + . Parent=GSCOCT00024694001 | |
| 33677 chr10 manual_curation exon 1491959 1492049 . + . Parent=GSCOCT00024694001 | |
| 33678 chr10 manual_curation exon 1492155 1492706 . + . Parent=GSCOCT00024694001 | |
| 33679 chr10 manual_curation CDS 1491585 1491656 . + 0 Parent=GSCOCT00024694001 | |
| 33680 chr10 manual_curation CDS 1491776 1491852 . + 0 Parent=GSCOCT00024694001 | |
| 33681 chr10 manual_curation CDS 1491959 1492049 . + 2 Parent=GSCOCT00024694001 | |
| 33682 chr10 manual_curation CDS 1492155 1492325 . + 0 Parent=GSCOCT00024694001 | |
| 33683 chr10 manual_curation gene 1498085 1499770 . - . ID=GSCOCG00024695001;Name=Cc10_g02000 | |
| 33684 chr10 manual_curation mRNA 1498085 1499770 . - . ID=GSCOCT00024695001;Parent=GSCOCG00024695001;Name=Cc10_g02000 | |
| 33685 chr10 manual_curation polypeptide 1498085 1499770 . - . ID=GSCOCP00024695001;Dbxref=GENE3D:G3DSA:2.130.10.80,GENE3D:G3DSA:2.60.40.10,InterPro:IPR009880,InterPro:IPR011043,InterPro:IPR013783,InterPro:IPR014756,InterPro:IPR015202,InterPro:IPR015916,PFAM:PF07250,PFAM:PF09118,SUPERFAMILY:SSF50965,SUPERFAMILY:SSF81296,SwissProt:Q01745,TAIR:AT1G19900.1,TAIR:AT1G75620.1,TAIR:AT3G57620.1,TrEMBL:B9R845,TrEMBL:F6GZR4,TrEMBL:G9JJS5;Derives_from=GSCOCT00024695001;Name=Cc10_g02000;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:glyoxal oxidase-related protein,CC_functional_completeness:complete,CC_gene:GAOA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024695001~ glyoxal oxidase-related protein~ GAOA~ complete;original_location=complement(1498085..1499770);owner=coffea | |
| 33686 chr10 manual_curation exon 1498085 1499770 . - . Parent=GSCOCT00024695001 | |
| 33687 chr10 manual_curation CDS 1498085 1499770 . - 0 Parent=GSCOCT00024695001 | |
| 33688 chr10 manual_curation gene 1504631 1511938 . - . ID=GSCOCG00024696001;Name=Cc10_g02010 | |
| 33689 chr10 manual_curation mRNA 1504631 1511938 . - . ID=GSCOCT00024696001;Parent=GSCOCG00024696001;Name=Cc10_g02010 | |
| 33690 chr10 manual_curation polypeptide 1504631 1511401 . - . ID=GSCOCP00024696001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019775,InterPro:IPR019781,InterPro:IPR019782,InterPro:IPR020472,PFAM:PF00400,PRINTS:PR00320,PROFILE:PS50082,PROFILE:PS50294,PROSITE:PS00678,SMART:SM00320,SUPERFAMILY:SSF50978,SwissProt:Q54HW5,SwissProt:Q9BYB4,SwissProt:Q9EQ15,TAIR:AT4G29860.1,TrEMBL:B9HQR8,TrEMBL:E0CPJ0,TrEMBL:F1DLK1;Derives_from=GSCOCT00024696001;Name=Cc10_g02010;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Guanine nucleotide-binding protein subunit beta-like protein 1 homolog,CC_functional_completeness:complete,CC_gene:gnb1l,CC_gene:Gnb1l,CC_gene:GNB1L;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024696001~ Putative Guanine nucleotide-binding protein subunit beta-like protein 1 homolog~ gnb1l~ complete;original_location=complement(join(1511298..1511401%2C1511095..1511157%2C1510717..1510788%2C1510500..1510556%2C1509414..1509577%2C1508957..1509015%2C1508787..1508877%2C1507489..1507555%2C1506693..1506775%2C1506493..1506584%2C1505700..1505806%2C1505143..1505206%2C1504631..1504735));owner=coffea | |
| 33691 chr10 manual_curation exon 1511546 1511938 . - . Parent=GSCOCT00024696001 | |
| 33692 chr10 manual_curation exon 1504631 1504735 . - . Parent=GSCOCT00024696001 | |
| 33693 chr10 manual_curation exon 1505143 1505206 . - . Parent=GSCOCT00024696001 | |
| 33694 chr10 manual_curation exon 1505700 1505806 . - . Parent=GSCOCT00024696001 | |
| 33695 chr10 manual_curation exon 1506493 1506584 . - . Parent=GSCOCT00024696001 | |
| 33696 chr10 manual_curation exon 1506693 1506775 . - . Parent=GSCOCT00024696001 | |
| 33697 chr10 manual_curation exon 1507489 1507555 . - . Parent=GSCOCT00024696001 | |
| 33698 chr10 manual_curation exon 1508787 1508877 . - . Parent=GSCOCT00024696001 | |
| 33699 chr10 manual_curation exon 1508957 1509015 . - . Parent=GSCOCT00024696001 | |
| 33700 chr10 manual_curation exon 1509414 1509577 . - . Parent=GSCOCT00024696001 | |
| 33701 chr10 manual_curation exon 1510500 1510556 . - . Parent=GSCOCT00024696001 | |
| 33702 chr10 manual_curation exon 1510717 1510788 . - . Parent=GSCOCT00024696001 | |
| 33703 chr10 manual_curation exon 1511095 1511157 . - . Parent=GSCOCT00024696001 | |
| 33704 chr10 manual_curation exon 1511298 1511443 . - . Parent=GSCOCT00024696001 | |
| 33705 chr10 manual_curation CDS 1504631 1504735 . - 0 Parent=GSCOCT00024696001 | |
| 33706 chr10 manual_curation CDS 1505143 1505206 . - 2 Parent=GSCOCT00024696001 | |
| 33707 chr10 manual_curation CDS 1505700 1505806 . - 0 Parent=GSCOCT00024696001 | |
| 33708 chr10 manual_curation CDS 1506493 1506584 . - 1 Parent=GSCOCT00024696001 | |
| 33709 chr10 manual_curation CDS 1506693 1506775 . - 2 Parent=GSCOCT00024696001 | |
| 33710 chr10 manual_curation CDS 1507489 1507555 . - 1 Parent=GSCOCT00024696001 | |
| 33711 chr10 manual_curation CDS 1508787 1508877 . - 0 Parent=GSCOCT00024696001 | |
| 33712 chr10 manual_curation CDS 1508957 1509015 . - 1 Parent=GSCOCT00024696001 | |
| 33713 chr10 manual_curation CDS 1509414 1509577 . - 2 Parent=GSCOCT00024696001 | |
| 33714 chr10 manual_curation CDS 1510500 1510556 . - 2 Parent=GSCOCT00024696001 | |
| 33715 chr10 manual_curation CDS 1510717 1510788 . - 2 Parent=GSCOCT00024696001 | |
| 33716 chr10 manual_curation CDS 1511095 1511157 . - 2 Parent=GSCOCT00024696001 | |
| 33717 chr10 manual_curation CDS 1511298 1511401 . - 0 Parent=GSCOCT00024696001 | |
| 33718 chr10 manual_curation gene 1512753 1524322 . + . ID=GSCOCG00024697001;Name=Cc10_g02020 | |
| 33719 chr10 manual_curation mRNA 1512753 1524322 . + . ID=GSCOCT00024697001;Parent=GSCOCG00024697001;Name=Cc10_g02020 | |
| 33720 chr10 manual_curation polypeptide 1513486 1523705 . + . ID=GSCOCP00024697001;Dbxref=InterPro:IPR002937,InterPro:IPR007526,PFAM:PF01593,PFAM:PF04433,PROFILE:PS50934,SwissProt:Q6Z690,SwissProt:Q8VXV7,SwissProt:Q9CAE3,TAIR:AT1G62830.1,TAIR:AT3G10390.1,TAIR:AT4G16310.1,TrEMBL:B9R844,TrEMBL:G7I5Y4,TrEMBL:I1MC63;Derives_from=GSCOCT00024697001;Name=Cc10_g02020;Ontology_term=CC_evidence_code:ISS,CC_EC_number:1.5.3.11,PRODUCT:LSD1-like 3,CC_functional_completeness:modules,CC_gene:FLD,CC_gene:LDL1,CC_gene:Os02g0755200;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024697001~ LSD1-like 3~ FLD~ modules;original_location=join(1513486..1513786%2C1513997..1515725%2C1517216..1517357%2C1517490..1519832%2C1519955..1520048%2C1520524..1520945%2C1521955..1522665%2C1522916..1522990%2C1523640..1523705);owner=coffea | |
| 33721 chr10 manual_curation exon 1512753 1512999 . + . Parent=GSCOCT00024697001 | |
| 33722 chr10 manual_curation exon 1513394 1513786 . + . Parent=GSCOCT00024697001 | |
| 33723 chr10 manual_curation exon 1513997 1515725 . + . Parent=GSCOCT00024697001 | |
| 33724 chr10 manual_curation exon 1517216 1517357 . + . Parent=GSCOCT00024697001 | |
| 33725 chr10 manual_curation exon 1517490 1519832 . + . Parent=GSCOCT00024697001 | |
| 33726 chr10 manual_curation exon 1519955 1520048 . + . Parent=GSCOCT00024697001 | |
| 33727 chr10 manual_curation exon 1520524 1520945 . + . Parent=GSCOCT00024697001 | |
| 33728 chr10 manual_curation exon 1521955 1522665 . + . Parent=GSCOCT00024697001 | |
| 33729 chr10 manual_curation exon 1522916 1522990 . + . Parent=GSCOCT00024697001 | |
| 33730 chr10 manual_curation exon 1523640 1524322 . + . Parent=GSCOCT00024697001 | |
| 33731 chr10 manual_curation CDS 1513486 1513786 . + 0 Parent=GSCOCT00024697001 | |
| 33732 chr10 manual_curation CDS 1513997 1515725 . + 1 Parent=GSCOCT00024697001 | |
| 33733 chr10 manual_curation CDS 1517216 1517357 . + 2 Parent=GSCOCT00024697001 | |
| 33734 chr10 manual_curation CDS 1517490 1519832 . + 0 Parent=GSCOCT00024697001 | |
| 33735 chr10 manual_curation CDS 1519955 1520048 . + 0 Parent=GSCOCT00024697001 | |
| 33736 chr10 manual_curation CDS 1520524 1520945 . + 1 Parent=GSCOCT00024697001 | |
| 33737 chr10 manual_curation CDS 1521955 1522665 . + 0 Parent=GSCOCT00024697001 | |
| 33738 chr10 manual_curation CDS 1522916 1522990 . + 0 Parent=GSCOCT00024697001 | |
| 33739 chr10 manual_curation CDS 1523640 1523705 . + 0 Parent=GSCOCT00024697001 | |
| 33740 chr10 manual_curation gene 1527252 1529744 . + . ID=GSCOCG00024699001;Name=Cc10_g02030 | |
| 33741 chr10 manual_curation mRNA 1527252 1529744 . + . ID=GSCOCT00024699001;Parent=GSCOCG00024699001;Name=Cc10_g02030 | |
| 33742 chr10 manual_curation polypeptide 1527393 1529236 . + . ID=GSCOCP00024699001;Dbxref=InterPro:IPR000245,InterPro:IPR002379,InterPro:IPR011555,PFAM:PF00137,PRINTS:PR00122,SUPERFAMILY:SSF81333,SwissProt:Q40585,SwissProt:Q43434,SwissProt:Q96473,TAIR:AT1G19910.1,TAIR:AT4G34720.1,TAIR:AT4G38920.1,TIGRFAMs:TIGR01100,TrEMBL:C8CHS0,TrEMBL:Q5ZFS1,TrEMBL:Q76MT7;Derives_from=GSCOCT00024699001;Name=Cc10_g02030;Ontology_term=CC_evidence_code:ISS,GO:0015078,GO:0015986,CC_EC_number:missing_EC_number,PRODUCT:V-type proton ATPase 16 kDa proteolipid subunit,CC_functional_completeness:complete,CC_gene:CVA16-2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024699001~ V-type proton ATPase 16 kDa proteolipid subunit~ CVA16-2~ complete;original_location=join(1527393..1527471%2C1527620..1527905%2C1529104..1529236);owner=coffea | |
| 33743 chr10 manual_curation exon 1527252 1527471 . + . Parent=GSCOCT00024699001 | |
| 33744 chr10 manual_curation exon 1527620 1527905 . + . Parent=GSCOCT00024699001 | |
| 33745 chr10 manual_curation exon 1529104 1529744 . + . Parent=GSCOCT00024699001 | |
| 33746 chr10 manual_curation CDS 1527393 1527471 . + 0 Parent=GSCOCT00024699001 | |
| 33747 chr10 manual_curation CDS 1527620 1527905 . + 1 Parent=GSCOCT00024699001 | |
| 33748 chr10 manual_curation CDS 1529104 1529236 . + 2 Parent=GSCOCT00024699001 | |
| 33749 chr10 manual_curation gene 1530460 1533404 . + . ID=GSCOCG00024700001;Name=Cc10_g02040 | |
| 33750 chr10 manual_curation mRNA 1530460 1533404 . + . ID=GSCOCT00024700001;Parent=GSCOCG00024700001;Name=Cc10_g02040 | |
| 33751 chr10 manual_curation polypeptide 1530715 1533025 . + . ID=GSCOCP00024700001;Dbxref=InterPro:IPR000245,InterPro:IPR002379,InterPro:IPR011555,PFAM:PF00137,PRINTS:PR00122,SUPERFAMILY:SSF81333,SwissProt:Q40585,SwissProt:Q43434,SwissProt:Q96473,TAIR:AT1G19910.1,TAIR:AT4G34720.1,TAIR:AT4G38920.1,TIGRFAMs:TIGR01100,TrEMBL:C8CHS0,TrEMBL:Q5ZFS1,TrEMBL:Q76MT7;Derives_from=GSCOCT00024700001;Name=Cc10_g02040;Ontology_term=CC_evidence_code:ISS,GO:0015078,GO:0015986,CC_EC_number:missing_EC_number,PRODUCT:V-type proton ATPase 16 kDa proteolipid subunit,CC_functional_completeness:complete,CC_gene:CVA16-2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024700001~ V-type proton ATPase 16 kDa proteolipid subunit~ CVA16-2~ complete;original_location=join(1530715..1530793%2C1530892..1531177%2C1532893..1533025);owner=coffea | |
| 33752 chr10 manual_curation exon 1530460 1530793 . + . Parent=GSCOCT00024700001 | |
| 33753 chr10 manual_curation exon 1530892 1531177 . + . Parent=GSCOCT00024700001 | |
| 33754 chr10 manual_curation exon 1532893 1533404 . + . Parent=GSCOCT00024700001 | |
| 33755 chr10 manual_curation CDS 1530715 1530793 . + 0 Parent=GSCOCT00024700001 | |
| 33756 chr10 manual_curation CDS 1530892 1531177 . + 1 Parent=GSCOCT00024700001 | |
| 33757 chr10 manual_curation CDS 1532893 1533025 . + 2 Parent=GSCOCT00024700001 | |
| 33758 chr10 manual_curation gene 1534644 1539450 . + . ID=GSCOCG00024701001;Name=Cc10_g02050 | |
| 33759 chr10 manual_curation mRNA 1534644 1539450 . + . ID=GSCOCT00024701001;Parent=GSCOCG00024701001;Name=Cc10_g02050 | |
| 33760 chr10 manual_curation polypeptide 1535002 1539247 . + . ID=GSCOCP00024701001;Dbxref=InterPro:IPR000073,PFAM:PF00561,PRINTS:PR00111,SwissProt:O14249,SwissProt:Q8TB40,SwissProt:Q8VD66,TAIR:AT4G24160.1,TrEMBL:B9GRG2,TrEMBL:E0CPI5,TrEMBL:I1JT54;Derives_from=GSCOCT00024701001;Name=Cc10_g02050;Ontology_term=CC_evidence_code:ISS,CC_EC_number:3.4.11.5,PRODUCT:Putative Abhydrolase domain-containing protein 4,CC_functional_completeness:complete,CC_gene:Abhd4,CC_gene:ABHD4,CC_gene:SPAC6G10.03c;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024701001~ Putative Abhydrolase domain-containing protein 4~ Abhd4~ complete;original_location=join(1535002..1535189%2C1535660..1535896%2C1536438..1536484%2C1536598..1536716%2C1536805..1536965%2C1537756..1537865%2C1537941..1538040%2C1538835..1538958%2C1539122..1539247);owner=coffea | |
| 33761 chr10 manual_curation exon 1534644 1535189 . + . Parent=GSCOCT00024701001 | |
| 33762 chr10 manual_curation exon 1535660 1535896 . + . Parent=GSCOCT00024701001 | |
| 33763 chr10 manual_curation exon 1536438 1536484 . + . Parent=GSCOCT00024701001 | |
| 33764 chr10 manual_curation exon 1536598 1536716 . + . Parent=GSCOCT00024701001 | |
| 33765 chr10 manual_curation exon 1536805 1536965 . + . Parent=GSCOCT00024701001 | |
| 33766 chr10 manual_curation exon 1537756 1537865 . + . Parent=GSCOCT00024701001 | |
| 33767 chr10 manual_curation exon 1537941 1538040 . + . Parent=GSCOCT00024701001 | |
| 33768 chr10 manual_curation exon 1538835 1538958 . + . Parent=GSCOCT00024701001 | |
| 33769 chr10 manual_curation exon 1539122 1539450 . + . Parent=GSCOCT00024701001 | |
| 33770 chr10 manual_curation CDS 1535002 1535189 . + 0 Parent=GSCOCT00024701001 | |
| 33771 chr10 manual_curation CDS 1535660 1535896 . + 2 Parent=GSCOCT00024701001 | |
| 33772 chr10 manual_curation CDS 1536438 1536484 . + 2 Parent=GSCOCT00024701001 | |
| 33773 chr10 manual_curation CDS 1536598 1536716 . + 1 Parent=GSCOCT00024701001 | |
| 33774 chr10 manual_curation CDS 1536805 1536965 . + 0 Parent=GSCOCT00024701001 | |
| 33775 chr10 manual_curation CDS 1537756 1537865 . + 2 Parent=GSCOCT00024701001 | |
| 33776 chr10 manual_curation CDS 1537941 1538040 . + 1 Parent=GSCOCT00024701001 | |
| 33777 chr10 manual_curation CDS 1538835 1538958 . + 2 Parent=GSCOCT00024701001 | |
| 33778 chr10 manual_curation CDS 1539122 1539247 . + 0 Parent=GSCOCT00024701001 | |
| 33779 chr10 manual_curation gene 1544474 1547875 . - . ID=GSCOCG00024702001;Name=Cc10_g02060 | |
| 33780 chr10 manual_curation mRNA 1544474 1547875 . - . ID=GSCOCT00024702001;Parent=GSCOCG00024702001;Name=Cc10_g02060 | |
| 33781 chr10 manual_curation polypeptide 1544474 1547875 . - . ID=GSCOCP00024702001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:C0LGS2,SwissProt:Q9FIZ3,SwissProt:Q9LYN8,TAIR:AT1G75640.1,TAIR:AT4G36180.1,TAIR:AT5G07280.1,TrEMBL:B9GRG3,TrEMBL:B9H4J1,TrEMBL:B9R841;Derives_from=GSCOCT00024702001;Name=Cc10_g02060;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Probable LRR receptor-like serine/threonine-protein kinase At4g36180,CC_functional_completeness:complete,CC_gene:At4g36180,CC_gene:EXS,CC_gene:GSO2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024702001~ Probable LRR receptor-like serine/threonine-protein kinase At4g36180~ At4g36180~ complete;original_location=complement(1544474..1547875);owner=coffea | |
| 33782 chr10 manual_curation exon 1544474 1547875 . - . Parent=GSCOCT00024702001 | |
| 33783 chr10 manual_curation CDS 1544474 1547875 . - 0 Parent=GSCOCT00024702001 | |
| 33784 chr10 manual_curation gene 1550342 1555452 . + . ID=GSCOCG00024703001;Name=Cc10_g02070 | |
| 33785 chr10 manual_curation mRNA 1550342 1555452 . + . ID=GSCOCT00024703001;Parent=GSCOCG00024703001;Name=Cc10_g02070 | |
| 33786 chr10 manual_curation polypeptide 1550529 1555191 . + . ID=GSCOCP00024703001;Dbxref=InterPro:IPR001623,SUPERFAMILY:SSF46565,SwissProt:Q8VY16,SwissProt:Q9FIG9,TAIR:AT3G19180.1,TAIR:AT5G42480.1,TrEMBL:A5BDQ0,TrEMBL:F6I050,TrEMBL:G8Z271;Derives_from=GSCOCT00024703001;Name=Cc10_g02070;Ontology_term=CC_evidence_code:ISS,GO:0031072,CC_EC_number:missing_EC_number,PRODUCT:Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6%2C chloroplastic,CC_functional_completeness:complete,CC_gene:ARC6,CC_gene:CDP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024703001~ Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6%2C chloroplastic~ ARC6~ complete;original_location=join(1550529..1551098%2C1551408..1551632%2C1552233..1552493%2C1552636..1553602%2C1554083..1554216%2C1554901..1555191);owner=coffea | |
| 33787 chr10 manual_curation exon 1550342 1551098 . + . Parent=GSCOCT00024703001 | |
| 33788 chr10 manual_curation exon 1551408 1551632 . + . Parent=GSCOCT00024703001 | |
| 33789 chr10 manual_curation exon 1552233 1552493 . + . Parent=GSCOCT00024703001 | |
| 33790 chr10 manual_curation exon 1552636 1553602 . + . Parent=GSCOCT00024703001 | |
| 33791 chr10 manual_curation exon 1554083 1554216 . + . Parent=GSCOCT00024703001 | |
| 33792 chr10 manual_curation exon 1554901 1555452 . + . Parent=GSCOCT00024703001 | |
| 33793 chr10 manual_curation CDS 1550529 1551098 . + 0 Parent=GSCOCT00024703001 | |
| 33794 chr10 manual_curation CDS 1551408 1551632 . + 0 Parent=GSCOCT00024703001 | |
| 33795 chr10 manual_curation CDS 1552233 1552493 . + 0 Parent=GSCOCT00024703001 | |
| 33796 chr10 manual_curation CDS 1552636 1553602 . + 0 Parent=GSCOCT00024703001 | |
| 33797 chr10 manual_curation CDS 1554083 1554216 . + 1 Parent=GSCOCT00024703001 | |
| 33798 chr10 manual_curation CDS 1554901 1555191 . + 0 Parent=GSCOCT00024703001 | |
| 33799 chr10 manual_curation gene 1556292 1557787 . + . ID=GSCOCG00024704001;Name=Cc10_g02080 | |
| 33800 chr10 manual_curation mRNA 1556292 1557787 . + . ID=GSCOCT00024704001;Parent=GSCOCG00024704001;Name=Cc10_g02080 | |
| 33801 chr10 manual_curation polypeptide 1556525 1557481 . + . ID=GSCOCP00024704001;Dbxref=GENE3D:G3DSA:3.20.20.190,InterPro:IPR000909,InterPro:IPR017946,PFAM:PF00388,PROFILE:PS50007,SMART:SM00148,SUPERFAMILY:SSF51695,TAIR:AT4G34920.1,TAIR:AT4G34930.1,TAIR:AT4G38690.1,TrEMBL:B9H168,TrEMBL:B9HR89,TrEMBL:B9SQL5;Derives_from=GSCOCT00024704001;Name=Cc10_g02080;Ontology_term=CC_evidence_code:ISS,GO:0004629,GO:0006629,GO:0008081,GO:0023034,CC_EC_number:missing_EC_number,PRODUCT:PLC-like phosphodiesterases superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024704001~ PLC-like phosphodiesterases superfamily protein~ unknown_gene~ complete;original_location=1556525..1557481;owner=coffea | |
| 33802 chr10 manual_curation exon 1556292 1557787 . + . Parent=GSCOCT00024704001 | |
| 33803 chr10 manual_curation CDS 1556525 1557481 . + 0 Parent=GSCOCT00024704001 | |
| 33804 chr10 manual_curation gene 1558623 1564540 . - . ID=GSCOCG00024706001;Name=Cc10_g02090 | |
| 33805 chr10 manual_curation mRNA 1558623 1564540 . - . ID=GSCOCT00024706001;Parent=GSCOCG00024706001;Name=Cc10_g02090 | |
| 33806 chr10 manual_curation polypeptide 1558623 1564540 . - . ID=GSCOCP00024706001;Dbxref=GENE3D:G3DSA:3.40.850.10,InterPro:IPR001752,InterPro:IPR019821,InterPro:IPR021881,PFAM:PF00225,PFAM:PF11995,PRINTS:PR00380,PROFILE:PS50067,PROSITE:PS00411,SMART:SM00129,SwissProt:Q02224,SwissProt:Q54NP8,SwissProt:Q6RT24,TAIR:AT2G21300.1,TAIR:AT3G51150.2,TAIR:AT4G38950.1,TrEMBL:A5AQK6,TrEMBL:B9R839,TrEMBL:F6GZQ9;Derives_from=GSCOCT00024706001;Name=Cc10_g02090;Ontology_term=CC_evidence_code:ISS,GO:0003777,GO:0005524,GO:0007018,CC_EC_number:missing_EC_number,PRODUCT:Putative ATP binding microtubule motor family protein,CC_functional_completeness:complete,CC_gene:CENPE,CC_gene:kif4,CC_gene:Cenpe;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024706001~ Putative ATP binding microtubule motor family protein~ CENPE~ complete;original_location=complement(join(1564318..1564540%2C1563864..1563953%2C1563678..1563778%2C1563456..1563569%2C1563288..1563369%2C1563135..1563202%2C1562812..1562877%2C1562521..1562645%2C1561411..1561744%2C1561079..1561183%2C1560534..1560993%2C1559866..1560290%2C1559266..1559564%2C1558623..1558944));owner=coffea | |
| 33807 chr10 manual_curation exon 1558623 1558944 . - . Parent=GSCOCT00024706001 | |
| 33808 chr10 manual_curation exon 1559266 1559564 . - . Parent=GSCOCT00024706001 | |
| 33809 chr10 manual_curation exon 1559866 1560290 . - . Parent=GSCOCT00024706001 | |
| 33810 chr10 manual_curation exon 1560534 1560993 . - . Parent=GSCOCT00024706001 | |
| 33811 chr10 manual_curation exon 1561079 1561183 . - . Parent=GSCOCT00024706001 | |
| 33812 chr10 manual_curation exon 1561411 1561744 . - . Parent=GSCOCT00024706001 | |
| 33813 chr10 manual_curation exon 1562521 1562645 . - . Parent=GSCOCT00024706001 | |
| 33814 chr10 manual_curation exon 1562812 1562877 . - . Parent=GSCOCT00024706001 | |
| 33815 chr10 manual_curation exon 1563135 1563202 . - . Parent=GSCOCT00024706001 | |
| 33816 chr10 manual_curation exon 1563288 1563369 . - . Parent=GSCOCT00024706001 | |
| 33817 chr10 manual_curation exon 1563456 1563569 . - . Parent=GSCOCT00024706001 | |
| 33818 chr10 manual_curation exon 1563678 1563778 . - . Parent=GSCOCT00024706001 | |
| 33819 chr10 manual_curation exon 1563864 1563953 . - . Parent=GSCOCT00024706001 | |
| 33820 chr10 manual_curation exon 1564318 1564540 . - . Parent=GSCOCT00024706001 | |
| 33821 chr10 manual_curation CDS 1558623 1558944 . - 2 Parent=GSCOCT00024706001 | |
| 33822 chr10 manual_curation CDS 1559266 1559564 . - 0 Parent=GSCOCT00024706001 | |
| 33823 chr10 manual_curation CDS 1559866 1560290 . - 1 Parent=GSCOCT00024706001 | |
| 33824 chr10 manual_curation CDS 1560534 1560993 . - 0 Parent=GSCOCT00024706001 | |
| 33825 chr10 manual_curation CDS 1561079 1561183 . - 0 Parent=GSCOCT00024706001 | |
| 33826 chr10 manual_curation CDS 1561411 1561744 . - 2 Parent=GSCOCT00024706001 | |
| 33827 chr10 manual_curation CDS 1562521 1562645 . - 0 Parent=GSCOCT00024706001 | |
| 33828 chr10 manual_curation CDS 1562812 1562877 . - 0 Parent=GSCOCT00024706001 | |
| 33829 chr10 manual_curation CDS 1563135 1563202 . - 1 Parent=GSCOCT00024706001 | |
| 33830 chr10 manual_curation CDS 1563288 1563369 . - 0 Parent=GSCOCT00024706001 | |
| 33831 chr10 manual_curation CDS 1563456 1563569 . - 0 Parent=GSCOCT00024706001 | |
| 33832 chr10 manual_curation CDS 1563678 1563778 . - 1 Parent=GSCOCT00024706001 | |
| 33833 chr10 manual_curation CDS 1563864 1563953 . - 1 Parent=GSCOCT00024706001 | |
| 33834 chr10 manual_curation CDS 1564318 1564540 . - 0 Parent=GSCOCT00024706001 | |
| 33835 chr10 manual_curation gene 1570507 1573793 . + . ID=GSCOCG00024707001;Name=Cc10_g02100 | |
| 33836 chr10 manual_curation mRNA 1570507 1573793 . + . ID=GSCOCT00024707001;Parent=GSCOCG00024707001;Name=Cc10_g02100 | |
| 33837 chr10 manual_curation polypeptide 1570997 1573408 . + . ID=GSCOCP00024707001;Dbxref=GENE3D:G3DSA:1.25.40.10,InterPro:IPR001440,InterPro:IPR002048,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR018249,InterPro:IPR019734,PFAM:PF00515,PROFILE:PS50005,PROFILE:PS50222,PROFILE:PS50293,SMART:SM00028,SMART:SM00054,SwissProt:O18158,SwissProt:O23052,SwissProt:Q8S8L9,TAIR:AT1G05150.1,TAIR:AT2G32450.1,TAIR:AT3G04240.1,TrEMBL:B9GRG6,TrEMBL:B9H4I9,TrEMBL:F6GZQ8;Derives_from=GSCOCT00024707001;Name=Cc10_g02100;Ontology_term=CC_evidence_code:ISS,GO:0005488,GO:0005509,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterized TPR repeat-containing protein At1g05150,CC_functional_completeness:complete,CC_gene:At1g05150,CC_gene:At2g32450,CC_gene:ogt-1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024707001~ Uncharacterized TPR repeat-containing protein At1g05150~ At1g05150~ complete;original_location=1570997..1573408;owner=coffea | |
| 33838 chr10 manual_curation exon 1570507 1573793 . + . Parent=GSCOCT00024707001 | |
| 33839 chr10 manual_curation CDS 1570997 1573408 . + 0 Parent=GSCOCT00024707001 | |
| 33840 chr10 manual_curation gene 1576175 1580260 . - . ID=GSCOCG00024708001;Name=Cc10_g02110 | |
| 33841 chr10 manual_curation mRNA 1576175 1580260 . - . ID=GSCOCT00024708001;Parent=GSCOCG00024708001;Name=Cc10_g02110 | |
| 33842 chr10 manual_curation polypeptide 1577253 1580059 . - . ID=GSCOCP00024708001;Dbxref=SwissProt:Q4V838,SwissProt:Q68FR7,SwissProt:Q6NSQ7,TAIR:AT3G49990.1,TrEMBL:B9H4I8,TrEMBL:B9R836,TrEMBL:F6GZQ7;Derives_from=GSCOCT00024708001;Name=Cc10_g02110;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B Has 1524 Blast hits to 1298 proteins in 225 species,CC_functional_completeness:complete,CC_gene:Ltv1,CC_gene:ltv1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024708001~ unknown protein%3B Has 1524 Blast hits to 1298 proteins in 225 species: Archae - 9%3B Bacteria - 84%3B Metazoa - 474%3B Fungi - 184%3B Plants - 98%3B Viruses - 17%3B Other Eukaryotes - 658 (source: NCBI BLink).~ Ltv1~ complete;original_location=complement(join(1579625..1580059%2C1578624..1579016%2C1577737..1578342%2C1577253..1577384));owner=coffea | |
| 33843 chr10 manual_curation exon 1576175 1577384 . - . Parent=GSCOCT00024708001 | |
| 33844 chr10 manual_curation exon 1577737 1578342 . - . Parent=GSCOCT00024708001 | |
| 33845 chr10 manual_curation exon 1578624 1579016 . - . Parent=GSCOCT00024708001 | |
| 33846 chr10 manual_curation exon 1579625 1580260 . - . Parent=GSCOCT00024708001 | |
| 33847 chr10 manual_curation CDS 1577253 1577384 . - 0 Parent=GSCOCT00024708001 | |
| 33848 chr10 manual_curation CDS 1577737 1578342 . - 0 Parent=GSCOCT00024708001 | |
| 33849 chr10 manual_curation CDS 1578624 1579016 . - 0 Parent=GSCOCT00024708001 | |
| 33850 chr10 manual_curation CDS 1579625 1580059 . - 0 Parent=GSCOCT00024708001 | |
| 33851 chr10 manual_curation gene 1581883 1582575 . + . ID=GSCOCG00024709001;Name=Cc10_g02120 | |
| 33852 chr10 manual_curation mRNA 1581883 1582575 . + . ID=GSCOCT00024709001;Parent=GSCOCG00024709001;Name=Cc10_g02120 | |
| 33853 chr10 manual_curation polypeptide 1581883 1582293 . + . ID=GSCOCP00024709001;Dbxref=TrEMBL:B9R833,TrEMBL:F6GZQ6,TrEMBL:G7I5W6;Derives_from=GSCOCT00024709001;Name=Cc10_g02120;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024709001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(1581883..1582097%2C1582134..1582293);owner=coffea | |
| 33854 chr10 manual_curation exon 1581883 1582097 . + . Parent=GSCOCT00024709001 | |
| 33855 chr10 manual_curation exon 1582134 1582575 . + . Parent=GSCOCT00024709001 | |
| 33856 chr10 manual_curation CDS 1581883 1582097 . + 0 Parent=GSCOCT00024709001 | |
| 33857 chr10 manual_curation CDS 1582134 1582293 . + 2 Parent=GSCOCT00024709001 | |
| 33858 chr10 manual_curation gene 1583787 1587635 . + . ID=GSCOCG00024710001;Name=Cc10_g02130 | |
| 33859 chr10 manual_curation mRNA 1583787 1587635 . + . ID=GSCOCT00024710001;Parent=GSCOCG00024710001;Name=Cc10_g02130 | |
| 33860 chr10 manual_curation polypeptide 1584002 1587373 . + . ID=GSCOCP00024710001;Dbxref=InterPro:IPR001452,PFAM:PF00018,PROFILE:PS50002,SMART:SM00326,SUPERFAMILY:SSF50044,TAIR:AT1G31440.1,TAIR:AT4G18060.1,TAIR:AT4G34660.1,TrEMBL:B9RHC4,TrEMBL:G7J7R7,TrEMBL:I1K731;Derives_from=GSCOCT00024710001;Name=Cc10_g02130;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:SH3 domain-containing protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024710001~ SH3 domain-containing protein~ unknown_gene~ complete;original_location=join(1584002..1584061%2C1585041..1585160%2C1585240..1585309%2C1585392..1585543%2C1585688..1585789%2C1586070..1586270%2C1586378..1586440%2C1586573..1586725%2C1586831..1586905%2C1587257..1587373);owner=coffea | |
| 33861 chr10 manual_curation exon 1583787 1584061 . + . Parent=GSCOCT00024710001 | |
| 33862 chr10 manual_curation exon 1585041 1585160 . + . Parent=GSCOCT00024710001 | |
| 33863 chr10 manual_curation exon 1585240 1585309 . + . Parent=GSCOCT00024710001 | |
| 33864 chr10 manual_curation exon 1585392 1585543 . + . Parent=GSCOCT00024710001 | |
| 33865 chr10 manual_curation exon 1585688 1585789 . + . Parent=GSCOCT00024710001 | |
| 33866 chr10 manual_curation exon 1586070 1586270 . + . Parent=GSCOCT00024710001 | |
| 33867 chr10 manual_curation exon 1586378 1586440 . + . Parent=GSCOCT00024710001 | |
| 33868 chr10 manual_curation exon 1586573 1586725 . + . Parent=GSCOCT00024710001 | |
| 33869 chr10 manual_curation exon 1586831 1586905 . + . Parent=GSCOCT00024710001 | |
| 33870 chr10 manual_curation exon 1587257 1587635 . + . Parent=GSCOCT00024710001 | |
| 33871 chr10 manual_curation CDS 1584002 1584061 . + 0 Parent=GSCOCT00024710001 | |
| 33872 chr10 manual_curation CDS 1585041 1585160 . + 0 Parent=GSCOCT00024710001 | |
| 33873 chr10 manual_curation CDS 1585240 1585309 . + 0 Parent=GSCOCT00024710001 | |
| 33874 chr10 manual_curation CDS 1585392 1585543 . + 1 Parent=GSCOCT00024710001 | |
| 33875 chr10 manual_curation CDS 1585688 1585789 . + 0 Parent=GSCOCT00024710001 | |
| 33876 chr10 manual_curation CDS 1586070 1586270 . + 0 Parent=GSCOCT00024710001 | |
| 33877 chr10 manual_curation CDS 1586378 1586440 . + 0 Parent=GSCOCT00024710001 | |
| 33878 chr10 manual_curation CDS 1586573 1586725 . + 0 Parent=GSCOCT00024710001 | |
| 33879 chr10 manual_curation CDS 1586831 1586905 . + 0 Parent=GSCOCT00024710001 | |
| 33880 chr10 manual_curation CDS 1587257 1587373 . + 0 Parent=GSCOCT00024710001 | |
| 33881 chr10 manual_curation gene 1593640 1595068 . - . ID=GSCOCG00024711001;Name=Cc10_g02140 | |
| 33882 chr10 manual_curation mRNA 1593640 1595068 . - . ID=GSCOCT00024711001;Parent=GSCOCG00024711001;Name=Cc10_g02140 | |
| 33883 chr10 manual_curation polypeptide 1593640 1594940 . - . ID=GSCOCP00024711001;Dbxref=InterPro:IPR000315,PFAM:PF00643,PROFILE:PS50119,SMART:SM00336,SwissProt:Q96288,SwissProt:Q9LQZ7,SwissProt:Q9SYM2,TAIR:AT1G75540.1,TAIR:AT1G78600.2,TAIR:AT4G39070.1,TrEMBL:B9H4I6,TrEMBL:D9ZIW4,TrEMBL:E0CPH8;Derives_from=GSCOCT00024711001;Name=Cc10_g02140;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable salt tolerance-like protein At1g75540,CC_functional_completeness:complete,CC_gene:At1g75540,CC_gene:At1g78600,CC_gene:STO;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024711001~ Putative Probable salt tolerance-like protein At1g75540~ At1g75540~ complete;original_location=complement(join(1594755..1594940%2C1594364..1594618%2C1594067..1594240%2C1593640..1593975));owner=coffea | |
| 33884 chr10 manual_curation exon 1593640 1593975 . - . Parent=GSCOCT00024711001 | |
| 33885 chr10 manual_curation exon 1594067 1594240 . - . Parent=GSCOCT00024711001 | |
| 33886 chr10 manual_curation exon 1594364 1594618 . - . Parent=GSCOCT00024711001 | |
| 33887 chr10 manual_curation exon 1594755 1595068 . - . Parent=GSCOCT00024711001 | |
| 33888 chr10 manual_curation CDS 1593640 1593975 . - 0 Parent=GSCOCT00024711001 | |
| 33889 chr10 manual_curation CDS 1594067 1594240 . - 0 Parent=GSCOCT00024711001 | |
| 33890 chr10 manual_curation CDS 1594364 1594618 . - 0 Parent=GSCOCT00024711001 | |
| 33891 chr10 manual_curation CDS 1594755 1594940 . - 0 Parent=GSCOCT00024711001 | |
| 33892 chr10 manual_curation gene 1603581 1609540 . - . ID=GSCOCG00024713001;Name=Cc10_g02150 | |
| 33893 chr10 manual_curation mRNA 1603581 1609540 . - . ID=GSCOCT00024713001;Parent=GSCOCG00024713001;Name=Cc10_g02150 | |
| 33894 chr10 manual_curation polypeptide 1603606 1609357 . - . ID=GSCOCP00024713001;Dbxref=InterPro:IPR000253,InterPro:IPR008984,PFAM:PF00498,PROFILE:PS50006,SMART:SM00240,SUPERFAMILY:SSF49879,SwissProt:Q96EZ8,SwissProt:Q99L90,TAIR:AT1G60700.1,TAIR:AT1G75530.1,TAIR:AT3G54350.1,TrEMBL:B9H4I4,TrEMBL:B9R830,TrEMBL:F6GWR0;Derives_from=GSCOCT00024713001;Name=Cc10_g02150;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Forkhead-associated (FHA) domain-containing protein,CC_functional_completeness:complete,CC_gene:Mcrs1,CC_gene:MCRS1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024713001~ Putative Forkhead-associated (FHA) domain-containing protein~ Mcrs1~ complete;original_location=complement(join(1609286..1609357%2C1607658..1608407%2C1607535..1607551%2C1607084..1607364%2C1606470..1607026%2C1606227..1606400%2C1606080..1606134%2C1605399..1605547%2C1604874..1604960%2C1604268..1604396%2C1603606..1603713));owner=coffea | |
| 33895 chr10 manual_curation exon 1603581 1603713 . - . Parent=GSCOCT00024713001 | |
| 33896 chr10 manual_curation exon 1604268 1604396 . - . Parent=GSCOCT00024713001 | |
| 33897 chr10 manual_curation exon 1604874 1604960 . - . Parent=GSCOCT00024713001 | |
| 33898 chr10 manual_curation exon 1605399 1605547 . - . Parent=GSCOCT00024713001 | |
| 33899 chr10 manual_curation exon 1606080 1606134 . - . Parent=GSCOCT00024713001 | |
| 33900 chr10 manual_curation exon 1606227 1606400 . - . Parent=GSCOCT00024713001 | |
| 33901 chr10 manual_curation exon 1606470 1607026 . - . Parent=GSCOCT00024713001 | |
| 33902 chr10 manual_curation exon 1607084 1607364 . - . Parent=GSCOCT00024713001 | |
| 33903 chr10 manual_curation exon 1607535 1607551 . - . Parent=GSCOCT00024713001 | |
| 33904 chr10 manual_curation exon 1607658 1608407 . - . Parent=GSCOCT00024713001 | |
| 33905 chr10 manual_curation exon 1609286 1609540 . - . Parent=GSCOCT00024713001 | |
| 33906 chr10 manual_curation CDS 1603606 1603713 . - 0 Parent=GSCOCT00024713001 | |
| 33907 chr10 manual_curation CDS 1604268 1604396 . - 0 Parent=GSCOCT00024713001 | |
| 33908 chr10 manual_curation CDS 1604874 1604960 . - 0 Parent=GSCOCT00024713001 | |
| 33909 chr10 manual_curation CDS 1605399 1605547 . - 1 Parent=GSCOCT00024713001 | |
| 33910 chr10 manual_curation CDS 1606080 1606134 . - 0 Parent=GSCOCT00024713001 | |
| 33911 chr10 manual_curation CDS 1606227 1606400 . - 0 Parent=GSCOCT00024713001 | |
| 33912 chr10 manual_curation CDS 1606470 1607026 . - 1 Parent=GSCOCT00024713001 | |
| 33913 chr10 manual_curation CDS 1607084 1607364 . - 2 Parent=GSCOCT00024713001 | |
| 33914 chr10 manual_curation CDS 1607535 1607551 . - 0 Parent=GSCOCT00024713001 | |
| 33915 chr10 manual_curation CDS 1607658 1608407 . - 0 Parent=GSCOCT00024713001 | |
| 33916 chr10 manual_curation CDS 1609286 1609357 . - 0 Parent=GSCOCT00024713001 | |
| 33917 chr10 manual_curation gene 1610509 1612879 . - . ID=GSCOCG00024714001;Name=Cc10_g02160 | |
| 33918 chr10 manual_curation mRNA 1610509 1612879 . - . ID=GSCOCT00024714001;Parent=GSCOCG00024714001;Name=Cc10_g02160 | |
| 33919 chr10 manual_curation polypeptide 1610672 1612477 . - . ID=GSCOCP00024714001;Dbxref=InterPro:IPR002100,InterPro:IPR002487,PFAM:PF00319,PFAM:PF01486,PRINTS:PR00404,PROFILE:PS50066,PROFILE:PS51297,PROSITE:PS00350,SMART:SM00432,SUPERFAMILY:SSF55455,SwissProt:P23706,SwissProt:P35632,SwissProt:Q07472,TAIR:AT2G45650.1,TAIR:AT3G54340.1,TAIR:AT5G20240.1,TrEMBL:E9JTW6,TrEMBL:G3EIS3;Derives_from=GSCOCT00024714001;Name=Cc10_g02160;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0005634,GO:0043565,CC_EC_number:missing_EC_number,PRODUCT:Floral homeotic protein DEFICIENS,CC_functional_completeness:complete,CC_gene:DEFA,CC_gene:PMADS1,CC_gene:AP3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024714001~ Floral homeotic protein DEFICIENS~ DEFA~ complete;original_location=complement(join(1612290..1612477%2C1612120..1612186%2C1611942..1612003%2C1611746..1611845%2C1611128..1611169%2C1610971..1611015%2C1610672..1610842));owner=coffea | |
| 33920 chr10 manual_curation exon 1610509 1610842 . - . Parent=GSCOCT00024714001 | |
| 33921 chr10 manual_curation exon 1610971 1611015 . - . Parent=GSCOCT00024714001 | |
| 33922 chr10 manual_curation exon 1611128 1611169 . - . Parent=GSCOCT00024714001 | |
| 33923 chr10 manual_curation exon 1611746 1611845 . - . Parent=GSCOCT00024714001 | |
| 33924 chr10 manual_curation exon 1611942 1612003 . - . Parent=GSCOCT00024714001 | |
| 33925 chr10 manual_curation exon 1612120 1612186 . - . Parent=GSCOCT00024714001 | |
| 33926 chr10 manual_curation exon 1612290 1612879 . - . Parent=GSCOCT00024714001 | |
| 33927 chr10 manual_curation CDS 1610672 1610842 . - 0 Parent=GSCOCT00024714001 | |
| 33928 chr10 manual_curation CDS 1610971 1611015 . - 0 Parent=GSCOCT00024714001 | |
| 33929 chr10 manual_curation CDS 1611128 1611169 . - 0 Parent=GSCOCT00024714001 | |
| 33930 chr10 manual_curation CDS 1611746 1611845 . - 2 Parent=GSCOCT00024714001 | |
| 33931 chr10 manual_curation CDS 1611942 1612003 . - 0 Parent=GSCOCT00024714001 | |
| 33932 chr10 manual_curation CDS 1612120 1612186 . - 2 Parent=GSCOCT00024714001 | |
| 33933 chr10 manual_curation CDS 1612290 1612477 . - 0 Parent=GSCOCT00024714001 | |
| 33934 chr10 manual_curation gene 1615892 1617802 . - . ID=GSCOCG00024715001;Name=Cc10_g02170 | |
| 33935 chr10 manual_curation mRNA 1615892 1617802 . - . ID=GSCOCT00024715001;Parent=GSCOCG00024715001;Name=Cc10_g02170 | |
| 33936 chr10 manual_curation polypeptide 1616042 1617802 . - . ID=GSCOCP00024715001;Dbxref=InterPro:IPR004695,PFAM:PF03595,SwissProt:A8MRV9,SwissProt:Q5E930,SwissProt:Q9LD83,TAIR:AT1G12480.1,TAIR:AT1G62262.1,TAIR:AT1G62280.1,TrEMBL:D2U834,TrEMBL:E6NU71,TrEMBL:F6H7H3;Derives_from=GSCOCT00024715001;Name=Cc10_g02170;Ontology_term=CC_evidence_code:ISS,GO:0016021,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:S-type anion channel SLAH1,CC_functional_completeness:complete,CC_gene:SLAH1,CC_gene:SLAH4,CC_gene:SLAC1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024715001~ S-type anion channel SLAH1~ SLAH1~ complete;original_location=complement(join(1616957..1617802%2C1616042..1616323));owner=coffea | |
| 33937 chr10 manual_curation exon 1615892 1616323 . - . Parent=GSCOCT00024715001 | |
| 33938 chr10 manual_curation exon 1616957 1617802 . - . Parent=GSCOCT00024715001 | |
| 33939 chr10 manual_curation CDS 1616042 1616323 . - 0 Parent=GSCOCT00024715001 | |
| 33940 chr10 manual_curation CDS 1616957 1617802 . - 0 Parent=GSCOCT00024715001 | |
| 33941 chr10 manual_curation gene 1637714 1638273 . - . ID=GSCOCG00024717001;Name=Cc10_g02180 | |
| 33942 chr10 manual_curation mRNA 1637714 1638273 . - . ID=GSCOCT00024717001;Parent=GSCOCG00024717001;Name=Cc10_g02180 | |
| 33943 chr10 manual_curation polypeptide 1637714 1638273 . - . ID=GSCOCP00024717001;Dbxref=InterPro:IPR013128,PANTHER:PTHR12411,SwissProt:P25804,SwissProt:Q10716,TrEMBL:A2PZE0,TrEMBL:E3P862,TrEMBL:Q6UB43;Derives_from=GSCOCT00024717001;Name=Cc10_g02180;Ontology_term=CC_evidence_code:ISS,GO:0008234,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:CCP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024717001~ Hypothetical protein~ CCP1~ missing_functional_completeness;original_location=complement(join(1638107..1638273%2C1637714..1637927));owner=coffea | |
| 33944 chr10 manual_curation exon 1637714 1637927 . - . Parent=GSCOCT00024717001 | |
| 33945 chr10 manual_curation exon 1638107 1638273 . - . Parent=GSCOCT00024717001 | |
| 33946 chr10 manual_curation CDS 1637714 1637927 . - 2 Parent=GSCOCT00024717001 | |
| 33947 chr10 manual_curation CDS 1638107 1638273 . - 0 Parent=GSCOCT00024717001 | |
| 33948 chr10 manual_curation gene 1642623 1649362 . + . ID=GSCOCG00024718001;Name=Cc10_g02190 | |
| 33949 chr10 manual_curation mRNA 1642623 1649362 . + . ID=GSCOCT00024718001;Parent=GSCOCG00024718001;Name=Cc10_g02190 | |
| 33950 chr10 manual_curation polypeptide 1642900 1648961 . + . ID=GSCOCP00024718001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR006692,InterPro:IPR010714,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR016391,InterPro:IPR017986,InterPro:IPR019775,InterPro:IPR019781,InterPro:IPR019782,InterPro:IPR020472,PFAM:PF00400,PFAM:PF04053,PFAM:PF06957,PIR:PIRSF003354,PRINTS:PR00320,PROFILE:PS50082,PROFILE:PS50294,PROSITE:PS00678,SMART:SM00320,SUPERFAMILY:SSF50978,SwissProt:Q0J3D9,SwissProt:Q94A40,SwissProt:Q9SJT9,TAIR:AT1G52360.2,TAIR:AT1G62020.1,TAIR:AT2G21390.1,TrEMBL:B9IEK6,TrEMBL:B9RHB0,TrEMBL:F6GZQ1;Derives_from=GSCOCT00024718001;Name=Cc10_g02190;Ontology_term=CC_evidence_code:ISS,GO:0005198,GO:0005515,GO:0006886,GO:0016192,GO:0030117,GO:0030126,CC_EC_number:2.7.11.7,PRODUCT:Coatomer subunit alpha-1,CC_functional_completeness:complete,CC_gene:At1g62020,CC_gene:At2g21390,CC_gene:Os09g0127800;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024718001~ Coatomer subunit alpha-1~ At1g62020~ complete;original_location=join(1642900..1643107%2C1644000..1644494%2C1645460..1648359%2C1648434..1648469%2C1648857..1648961);owner=coffea | |
| 33951 chr10 manual_curation exon 1642623 1643107 . + . Parent=GSCOCT00024718001 | |
| 33952 chr10 manual_curation exon 1644000 1644494 . + . Parent=GSCOCT00024718001 | |
| 33953 chr10 manual_curation exon 1645460 1648359 . + . Parent=GSCOCT00024718001 | |
| 33954 chr10 manual_curation exon 1648434 1648469 . + . Parent=GSCOCT00024718001 | |
| 33955 chr10 manual_curation exon 1648857 1649362 . + . Parent=GSCOCT00024718001 | |
| 33956 chr10 manual_curation CDS 1642900 1643107 . + 0 Parent=GSCOCT00024718001 | |
| 33957 chr10 manual_curation CDS 1644000 1644494 . + 1 Parent=GSCOCT00024718001 | |
| 33958 chr10 manual_curation CDS 1645460 1648359 . + 1 Parent=GSCOCT00024718001 | |
| 33959 chr10 manual_curation CDS 1648434 1648469 . + 0 Parent=GSCOCT00024718001 | |
| 33960 chr10 manual_curation CDS 1648857 1648961 . + 0 Parent=GSCOCT00024718001 | |
| 33961 chr10 manual_curation gene 1659932 1661985 . + . ID=GSCOCG00024719001;Name=Cc10_g02200 | |
| 33962 chr10 manual_curation mRNA 1659932 1661985 . + . ID=GSCOCT00024719001;Parent=GSCOCG00024719001;Name=Cc10_g02200 | |
| 33963 chr10 manual_curation polypeptide 1660277 1661985 . + . ID=GSCOCP00024719001;Dbxref=InterPro:IPR006510,InterPro:IPR006511,InterPro:IPR007818,PFAM:PF05142,TAIR:AT1G19790.1,TAIR:AT1G75520.1,TAIR:AT3G51060.1,TIGRFAMs:TIGR01623,TIGRFAMs:TIGR01624,TrEMBL:A1DR76,TrEMBL:B9R828,TrEMBL:F6GZQ0;Derives_from=GSCOCT00024719001;Name=Cc10_g02200;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative SHI-related sequence 5,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024719001~ Putative SHI-related sequence 5~ unknown_gene~ complete;original_location=join(1660277..1660955%2C1661570..1661985);owner=coffea | |
| 33964 chr10 manual_curation exon 1659932 1660955 . + . Parent=GSCOCT00024719001 | |
| 33965 chr10 manual_curation exon 1661570 1661985 . + . Parent=GSCOCT00024719001 | |
| 33966 chr10 manual_curation CDS 1660277 1660955 . + 0 Parent=GSCOCT00024719001 | |
| 33967 chr10 manual_curation CDS 1661570 1661985 . + 1 Parent=GSCOCT00024719001 | |
| 33968 chr10 manual_curation gene 1668537 1677567 . + . ID=GSCOCG00024720001;Name=Cc10_g02210 | |
| 33969 chr10 manual_curation mRNA 1668537 1677567 . + . ID=GSCOCT00024720001;Parent=GSCOCG00024720001;Name=Cc10_g02210 | |
| 33970 chr10 manual_curation polypeptide 1668581 1676745 . + . ID=GSCOCP00024720001;Dbxref=InterPro:IPR002490,PANTHER:PTHR11629,PFAM:PF01496,SwissProt:Q54E04,SwissProt:Q8AVM5,SwissProt:Q9Z1G4,TAIR:AT2G21410.1,TAIR:AT2G28520.1,TAIR:AT4G39080.1,TrEMBL:B9GRH1,TrEMBL:B9R827,TrEMBL:E6NU69;Derives_from=GSCOCT00024720001;Name=Cc10_g02210;Ontology_term=CC_evidence_code:ISS,GO:0015078,GO:0015986,CC_EC_number:missing_EC_number,PRODUCT:Putative Vacuolar proton translocating ATPase 100 kDa subunit,CC_functional_completeness:complete,CC_gene:vatM,CC_gene:atp6v0a1,CC_gene:Atp6v0a1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024720001~ Putative Vacuolar proton translocating ATPase 100 kDa subunit~ vatM~ complete;original_location=join(1668581..1668694%2C1669387..1669431%2C1670963..1671085%2C1671272..1671379%2C1671488..1671598%2C1671713..1671886%2C1672330..1672467%2C1672597..1672704%2C1672824..1672931%2C1673040..1673188%2C1673719..1673872%2C1674531..1674691%2C1674791..1674997%2C1675213..1675396%2C1675493..1675576%2C1675679..1675872%2C1676381..1676440%2C1676541..1676745);owner=coffea | |
| 33971 chr10 manual_curation exon 1668537 1668694 . + . Parent=GSCOCT00024720001 | |
| 33972 chr10 manual_curation exon 1669387 1669431 . + . Parent=GSCOCT00024720001 | |
| 33973 chr10 manual_curation exon 1670963 1671085 . + . Parent=GSCOCT00024720001 | |
| 33974 chr10 manual_curation exon 1671272 1671379 . + . Parent=GSCOCT00024720001 | |
| 33975 chr10 manual_curation exon 1671488 1671598 . + . Parent=GSCOCT00024720001 | |
| 33976 chr10 manual_curation exon 1671713 1671886 . + . Parent=GSCOCT00024720001 | |
| 33977 chr10 manual_curation exon 1672330 1672467 . + . Parent=GSCOCT00024720001 | |
| 33978 chr10 manual_curation exon 1672597 1672704 . + . Parent=GSCOCT00024720001 | |
| 33979 chr10 manual_curation exon 1672824 1672931 . + . Parent=GSCOCT00024720001 | |
| 33980 chr10 manual_curation exon 1673040 1673188 . + . Parent=GSCOCT00024720001 | |
| 33981 chr10 manual_curation exon 1673719 1673872 . + . Parent=GSCOCT00024720001 | |
| 33982 chr10 manual_curation exon 1674531 1674691 . + . Parent=GSCOCT00024720001 | |
| 33983 chr10 manual_curation exon 1674791 1674997 . + . Parent=GSCOCT00024720001 | |
| 33984 chr10 manual_curation exon 1675213 1675396 . + . Parent=GSCOCT00024720001 | |
| 33985 chr10 manual_curation exon 1675493 1675576 . + . Parent=GSCOCT00024720001 | |
| 33986 chr10 manual_curation exon 1675679 1675872 . + . Parent=GSCOCT00024720001 | |
| 33987 chr10 manual_curation exon 1676381 1676440 . + . Parent=GSCOCT00024720001 | |
| 33988 chr10 manual_curation exon 1676541 1677567 . + . Parent=GSCOCT00024720001 | |
| 33989 chr10 manual_curation CDS 1668581 1668694 . + 0 Parent=GSCOCT00024720001 | |
| 33990 chr10 manual_curation CDS 1669387 1669431 . + 0 Parent=GSCOCT00024720001 | |
| 33991 chr10 manual_curation CDS 1670963 1671085 . + 0 Parent=GSCOCT00024720001 | |
| 33992 chr10 manual_curation CDS 1671272 1671379 . + 0 Parent=GSCOCT00024720001 | |
| 33993 chr10 manual_curation CDS 1671488 1671598 . + 0 Parent=GSCOCT00024720001 | |
| 33994 chr10 manual_curation CDS 1671713 1671886 . + 0 Parent=GSCOCT00024720001 | |
| 33995 chr10 manual_curation CDS 1672330 1672467 . + 0 Parent=GSCOCT00024720001 | |
| 33996 chr10 manual_curation CDS 1672597 1672704 . + 0 Parent=GSCOCT00024720001 | |
| 33997 chr10 manual_curation CDS 1672824 1672931 . + 0 Parent=GSCOCT00024720001 | |
| 33998 chr10 manual_curation CDS 1673040 1673188 . + 0 Parent=GSCOCT00024720001 | |
| 33999 chr10 manual_curation CDS 1673719 1673872 . + 2 Parent=GSCOCT00024720001 | |
| 34000 chr10 manual_curation CDS 1674531 1674691 . + 0 Parent=GSCOCT00024720001 | |
| 34001 chr10 manual_curation CDS 1674791 1674997 . + 2 Parent=GSCOCT00024720001 | |
| 34002 chr10 manual_curation CDS 1675213 1675396 . + 2 Parent=GSCOCT00024720001 | |
| 34003 chr10 manual_curation CDS 1675493 1675576 . + 0 Parent=GSCOCT00024720001 | |
| 34004 chr10 manual_curation CDS 1675679 1675872 . + 0 Parent=GSCOCT00024720001 | |
| 34005 chr10 manual_curation CDS 1676381 1676440 . + 2 Parent=GSCOCT00024720001 | |
| 34006 chr10 manual_curation CDS 1676541 1676745 . + 2 Parent=GSCOCT00024720001 | |
| 34007 chr10 manual_curation gene 1677640 1679750 . - . ID=GSCOCG00024721001;Name=Cc10_g02220 | |
| 34008 chr10 manual_curation mRNA 1677640 1679750 . - . ID=GSCOCT00024721001;Parent=GSCOCG00024721001;Name=Cc10_g02220 | |
| 34009 chr10 manual_curation polypeptide 1677640 1679706 . - . ID=GSCOCP00024721001;Dbxref=InterPro:IPR000169,InterPro:IPR000668,InterPro:IPR013128,InterPro:IPR013201,PANTHER:PTHR12411,PFAM:PF00112,PFAM:PF08246,PRINTS:PR00705,PROSITE:PS00139,PROSITE:PS00640,SMART:SM00645,SMART:SM00848,SwissProt:P25804,SwissProt:P43296,SwissProt:Q10716,TAIR:AT2G21430.1,TAIR:AT4G16190.1,TAIR:AT4G39090.1,TrEMBL:A9PEJ8,TrEMBL:A9PJM7,TrEMBL:B9GRH2;Derives_from=GSCOCT00024721001;Name=Cc10_g02220;Ontology_term=CC_evidence_code:ISS,GO:0004197,GO:0006508,GO:0008234,CC_EC_number:3.4.22.50,PRODUCT:Cysteine proteinase 15A,CC_functional_completeness:complete,CC_gene:RD19A,CC_gene:CCP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024721001~ Cysteine proteinase 15A~ RD19A~ complete;original_location=complement(join(1679212..1679706%2C1679007..1679126%2C1678055..1678298%2C1677640..1677911));owner=coffea | |
| 34010 chr10 manual_curation exon 1677640 1677911 . - . Parent=GSCOCT00024721001 | |
| 34011 chr10 manual_curation exon 1678055 1678298 . - . Parent=GSCOCT00024721001 | |
| 34012 chr10 manual_curation exon 1679007 1679126 . - . Parent=GSCOCT00024721001 | |
| 34013 chr10 manual_curation exon 1679212 1679750 . - . Parent=GSCOCT00024721001 | |
| 34014 chr10 manual_curation CDS 1677640 1677911 . - 1 Parent=GSCOCT00024721001 | |
| 34015 chr10 manual_curation CDS 1678055 1678298 . - 0 Parent=GSCOCT00024721001 | |
| 34016 chr10 manual_curation CDS 1679007 1679126 . - 0 Parent=GSCOCT00024721001 | |
| 34017 chr10 manual_curation CDS 1679212 1679706 . - 0 Parent=GSCOCT00024721001 | |
| 34018 chr10 manual_curation gene 1687288 1691397 . + . ID=GSCOCG00024722001;Name=Cc10_g02230 | |
| 34019 chr10 manual_curation mRNA 1687288 1691397 . + . ID=GSCOCT00024722001;Parent=GSCOCG00024722001;Name=Cc10_g02230 | |
| 34020 chr10 manual_curation polypeptide 1687408 1690711 . + . ID=GSCOCP00024722001;Dbxref=GENE3D:G3DSA:1.10.10.10,InterPro:IPR003196,InterPro:IPR011039,InterPro:IPR011991,PANTHER:PTHR10445,PFAM:PF02270,SUPERFAMILY:SSF50916,SwissProt:O94424,SwissProt:P13984,SwissProt:Q8R0A0,TAIR:AT1G75510.1,TAIR:AT3G52270.1,TrEMBL:B9R825,TrEMBL:E0CPG6,TrEMBL:E6NU66;Derives_from=GSCOCT00024722001;Name=Cc10_g02230;Ontology_term=CC_evidence_code:ISS,GO:0003702,GO:0003824,GO:0005524,GO:0005674,GO:0006367,CC_EC_number:missing_EC_number,PRODUCT:Putative Transcription initiation factor IIF subunit beta,CC_functional_completeness:complete,CC_gene:tfg2,CC_gene:Gtf2f2,CC_gene:GTF2F2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024722001~ Putative Transcription initiation factor IIF subunit beta~ tfg2~ complete;original_location=join(1687408..1687617%2C1688617..1688731%2C1689034..1689164%2C1689275..1689349%2C1689977..1690126%2C1690592..1690711);owner=coffea | |
| 34021 chr10 manual_curation exon 1687288 1687617 . + . Parent=GSCOCT00024722001 | |
| 34022 chr10 manual_curation exon 1688617 1688731 . + . Parent=GSCOCT00024722001 | |
| 34023 chr10 manual_curation exon 1689034 1689164 . + . Parent=GSCOCT00024722001 | |
| 34024 chr10 manual_curation exon 1689275 1689349 . + . Parent=GSCOCT00024722001 | |
| 34025 chr10 manual_curation exon 1689977 1690126 . + . Parent=GSCOCT00024722001 | |
| 34026 chr10 manual_curation exon 1690592 1691397 . + . Parent=GSCOCT00024722001 | |
| 34027 chr10 manual_curation CDS 1687408 1687617 . + 0 Parent=GSCOCT00024722001 | |
| 34028 chr10 manual_curation CDS 1688617 1688731 . + 0 Parent=GSCOCT00024722001 | |
| 34029 chr10 manual_curation CDS 1689034 1689164 . + 1 Parent=GSCOCT00024722001 | |
| 34030 chr10 manual_curation CDS 1689275 1689349 . + 0 Parent=GSCOCT00024722001 | |
| 34031 chr10 manual_curation CDS 1689977 1690126 . + 0 Parent=GSCOCT00024722001 | |
| 34032 chr10 manual_curation CDS 1690592 1690711 . + 0 Parent=GSCOCT00024722001 | |
| 34033 chr10 manual_curation gene 1700960 1704347 . + . ID=GSCOCG00024723001;Name=Cc10_g02240 | |
| 34034 chr10 manual_curation mRNA 1700960 1704347 . + . ID=GSCOCT00024723001;Parent=GSCOCG00024723001;Name=Cc10_g02240 | |
| 34035 chr10 manual_curation polypeptide 1701109 1703988 . + . ID=GSCOCP00024723001;Dbxref=InterPro:IPR000620,PFAM:PF00892,SwissProt:Q6J163,TAIR:AT1G75500.1,TAIR:AT3G18200.1,TAIR:AT3G53210.1,TrEMBL:A9P9F1,TrEMBL:A9PAE8,TrEMBL:E6NU65;Derives_from=GSCOCT00024723001;Name=Cc10_g02240;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Auxin-induced protein 5NG4,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024723001~ Auxin-induced protein 5NG4~ unknown_gene~ complete;original_location=join(1701109..1701332%2C1701586..1701648%2C1701786..1701812%2C1702003..1702414%2C1703178..1703329%2C1703784..1703988);owner=coffea | |
| 34036 chr10 manual_curation exon 1700960 1701332 . + . Parent=GSCOCT00024723001 | |
| 34037 chr10 manual_curation exon 1701586 1701648 . + . Parent=GSCOCT00024723001 | |
| 34038 chr10 manual_curation exon 1701786 1701812 . + . Parent=GSCOCT00024723001 | |
| 34039 chr10 manual_curation exon 1702003 1702414 . + . Parent=GSCOCT00024723001 | |
| 34040 chr10 manual_curation exon 1703178 1703329 . + . Parent=GSCOCT00024723001 | |
| 34041 chr10 manual_curation exon 1703784 1704347 . + . Parent=GSCOCT00024723001 | |
| 34042 chr10 manual_curation CDS 1701109 1701332 . + 0 Parent=GSCOCT00024723001 | |
| 34043 chr10 manual_curation CDS 1701586 1701648 . + 2 Parent=GSCOCT00024723001 | |
| 34044 chr10 manual_curation CDS 1701786 1701812 . + 2 Parent=GSCOCT00024723001 | |
| 34045 chr10 manual_curation CDS 1702003 1702414 . + 2 Parent=GSCOCT00024723001 | |
| 34046 chr10 manual_curation CDS 1703178 1703329 . + 0 Parent=GSCOCT00024723001 | |
| 34047 chr10 manual_curation CDS 1703784 1703988 . + 2 Parent=GSCOCT00024723001 | |
| 34048 chr10 manual_curation gene 1706925 1710857 . - . ID=GSCOCG00024724001;Name=Cc10_g02250 | |
| 34049 chr10 manual_curation mRNA 1706925 1710857 . - . ID=GSCOCT00024724001;Parent=GSCOCG00024724001;Name=Cc10_g02250 | |
| 34050 chr10 manual_curation polypeptide 1706925 1710857 . - . ID=GSCOCP00024724001;Dbxref=InterPro:IPR000109,InterPro:IPR016196,InterPro:IPR018456,PFAM:PF00854,PROSITE:PS01022,PROSITE:PS01023,SUPERFAMILY:SSF103473,SwissProt:P46032,SwissProt:Q9LFB8,SwissProt:Q9M390,TAIR:AT2G02040.1,TAIR:AT3G54140.1,TAIR:AT5G01180.1,TrEMBL:B9GRH5,TrEMBL:B9H4H7,TrEMBL:F6GZP8;Derives_from=GSCOCT00024724001;Name=Cc10_g02250;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006857,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative Peptide transporter PTR5,CC_functional_completeness:complete,CC_gene:PTR5,CC_gene:PTR1,CC_gene:PTR2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024724001~ Putative Peptide transporter PTR5~ PTR5~ complete;original_location=complement(join(1710756..1710857%2C1710521..1710629%2C1710178..1710395%2C1709280..1709839%2C1706925..1707804));owner=coffea | |
| 34051 chr10 manual_curation exon 1706925 1707804 . - . Parent=GSCOCT00024724001 | |
| 34052 chr10 manual_curation exon 1709280 1709839 . - . Parent=GSCOCT00024724001 | |
| 34053 chr10 manual_curation exon 1710178 1710395 . - . Parent=GSCOCT00024724001 | |
| 34054 chr10 manual_curation exon 1710521 1710629 . - . Parent=GSCOCT00024724001 | |
| 34055 chr10 manual_curation exon 1710756 1710857 . - . Parent=GSCOCT00024724001 | |
| 34056 chr10 manual_curation CDS 1706925 1707804 . - 2 Parent=GSCOCT00024724001 | |
| 34057 chr10 manual_curation CDS 1709280 1709839 . - 0 Parent=GSCOCT00024724001 | |
| 34058 chr10 manual_curation CDS 1710178 1710395 . - 1 Parent=GSCOCT00024724001 | |
| 34059 chr10 manual_curation CDS 1710521 1710629 . - 0 Parent=GSCOCT00024724001 | |
| 34060 chr10 manual_curation CDS 1710756 1710857 . - 0 Parent=GSCOCT00024724001 | |
| 34061 chr10 manual_curation gene 1713270 1717456 . + . ID=GSCOCG00024725001;Name=Cc10_g02260 | |
| 34062 chr10 manual_curation mRNA 1713270 1717456 . + . ID=GSCOCT00024725001;Parent=GSCOCG00024725001;Name=Cc10_g02260 | |
| 34063 chr10 manual_curation polypeptide 1713861 1716980 . + . ID=GSCOCP00024725001;Dbxref=GENE3D:G3DSA:2.60.40.380,InterPro:IPR004843,InterPro:IPR008963,InterPro:IPR015914,PFAM:PF00149,SUPERFAMILY:SSF49363,SwissProt:Q09131,SwissProt:Q9SDZ9,SwissProt:Q9SE00,TAIR:AT1G56360.1,TAIR:AT2G16430.2,TAIR:AT2G27190.1,TrEMBL:B9H4H5,TrEMBL:D7U5K3,TrEMBL:E0CPG2;Derives_from=GSCOCT00024725001;Name=Cc10_g02260;Ontology_term=CC_evidence_code:ISS,GO:0003993,GO:0016787,GO:0046872,CC_EC_number:missing_EC_number,CC_EC_number:missing_EC_number,PRODUCT:Purple acid phosphatase,CC_functional_completeness:complete,CC_gene:PAP,CC_gene:PAP2,CC_gene:PAP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024725001~ Purple acid phosphatase~ PAP~ complete;original_location=join(1713861..1713917%2C1714349..1714549%2C1714670..1714781%2C1715193..1715422%2C1715737..1715875%2C1716014..1716234%2C1716541..1716662%2C1716782..1716980);owner=coffea | |
| 34064 chr10 manual_curation exon 1713270 1713917 . + . Parent=GSCOCT00024725001 | |
| 34065 chr10 manual_curation exon 1714349 1714549 . + . Parent=GSCOCT00024725001 | |
| 34066 chr10 manual_curation exon 1714670 1714781 . + . Parent=GSCOCT00024725001 | |
| 34067 chr10 manual_curation exon 1715193 1715422 . + . Parent=GSCOCT00024725001 | |
| 34068 chr10 manual_curation exon 1715737 1715875 . + . Parent=GSCOCT00024725001 | |
| 34069 chr10 manual_curation exon 1716014 1716234 . + . Parent=GSCOCT00024725001 | |
| 34070 chr10 manual_curation exon 1716541 1716662 . + . Parent=GSCOCT00024725001 | |
| 34071 chr10 manual_curation exon 1716782 1717456 . + . Parent=GSCOCT00024725001 | |
| 34072 chr10 manual_curation CDS 1713861 1713917 . + 0 Parent=GSCOCT00024725001 | |
| 34073 chr10 manual_curation CDS 1714349 1714549 . + 0 Parent=GSCOCT00024725001 | |
| 34074 chr10 manual_curation CDS 1714670 1714781 . + 0 Parent=GSCOCT00024725001 | |
| 34075 chr10 manual_curation CDS 1715193 1715422 . + 1 Parent=GSCOCT00024725001 | |
| 34076 chr10 manual_curation CDS 1715737 1715875 . + 0 Parent=GSCOCT00024725001 | |
| 34077 chr10 manual_curation CDS 1716014 1716234 . + 1 Parent=GSCOCT00024725001 | |
| 34078 chr10 manual_curation CDS 1716541 1716662 . + 0 Parent=GSCOCT00024725001 | |
| 34079 chr10 manual_curation CDS 1716782 1716980 . + 2 Parent=GSCOCT00024725001 | |
| 34080 chr10 manual_curation gene 1723172 1723945 . - . ID=GSCOCG00024726001;Name=Cc10_g02270 | |
| 34081 chr10 manual_curation mRNA 1723172 1723945 . - . ID=GSCOCT00024726001;Parent=GSCOCG00024726001;Name=Cc10_g02270 | |
| 34082 chr10 manual_curation polypeptide 1723172 1723945 . - . ID=GSCOCP00024726001;Dbxref=GENE3D:G3DSA:3.30.730.10,InterPro:IPR001471,InterPro:IPR016177,PFAM:PF00847,PRINTS:PR00367,PROFILE:PS51032,SMART:SM00380,SUPERFAMILY:SSF54171,SwissProt:P61827,SwissProt:Q8LFR2,SwissProt:Q9LQZ2,TAIR:AT1G75490.1,TAIR:AT2G40340.1,TAIR:AT5G18450.1,TrEMBL:B9H4H4,TrEMBL:B9R819,TrEMBL:E6NU62;Derives_from=GSCOCT00024726001;Name=Cc10_g02270;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,CC_EC_number:missing_EC_number,PRODUCT:Dehydration-responsive element-binding protein 2G%2C putative,CC_functional_completeness:complete,CC_gene:DREB2D,CC_gene:DREB2G,CC_gene:DREB2C;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024726001~ Dehydration-responsive element-binding protein 2G%2C putative~ DREB2D~ complete;original_location=complement(1723172..1723945);owner=coffea | |
| 34083 chr10 manual_curation exon 1723172 1723945 . - . Parent=GSCOCT00024726001 | |
| 34084 chr10 manual_curation CDS 1723172 1723945 . - 0 Parent=GSCOCT00024726001 | |
| 34085 chr10 manual_curation gene 1733040 1738930 . - . ID=GSCOCG00024728001;Name=Cc10_g02280 | |
| 34086 chr10 manual_curation mRNA 1733040 1738930 . - . ID=GSCOCT00024728001;Parent=GSCOCG00024728001;Name=Cc10_g02280 | |
| 34087 chr10 manual_curation polypeptide 1733643 1738868 . - . ID=GSCOCP00024728001;Dbxref=InterPro:IPR002917,InterPro:IPR005225,InterPro:IPR006073,InterPro:IPR006074,InterPro:IPR006169,InterPro:IPR014100,PANTHER:PTHR11702:SF3,PFAM:PF01018,PFAM:PF01926,PIR:PIRSF002401,PRINTS:PR00326,PROSITE:PS00905,SUPERFAMILY:SSF82051,SwissProt:B5YEQ1,SwissProt:B8E0B2,SwissProt:Q2JJ90,TAIR:AT1G07615.1,TAIR:AT1G30580.1,TAIR:AT5G18570.1,TIGRFAMs:TIGR00231,TrEMBL:A5B1B5,TrEMBL:E0CPG0,TrEMBL:E6NU61;Derives_from=GSCOCT00024728001;Name=Cc10_g02280;Ontology_term=CC_evidence_code:ISS,GO:0000287,GO:0003924,GO:0005525,GO:0005622,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:obg;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024728001~ Putative uncharacterized protein~ obg~ complete;original_location=complement(join(1738759..1738868%2C1737773..1738245%2C1737540..1737631%2C1737250..1737333%2C1736169..1736246%2C1735767..1735967%2C1735534..1735641%2C1734997..1735071%2C1734677..1734870%2C1733643..1733745));owner=coffea | |
| 34088 chr10 manual_curation exon 1733040 1733745 . - . Parent=GSCOCT00024728001 | |
| 34089 chr10 manual_curation exon 1734677 1734870 . - . Parent=GSCOCT00024728001 | |
| 34090 chr10 manual_curation exon 1734997 1735071 . - . Parent=GSCOCT00024728001 | |
| 34091 chr10 manual_curation exon 1735534 1735641 . - . Parent=GSCOCT00024728001 | |
| 34092 chr10 manual_curation exon 1735767 1735967 . - . Parent=GSCOCT00024728001 | |
| 34093 chr10 manual_curation exon 1736169 1736246 . - . Parent=GSCOCT00024728001 | |
| 34094 chr10 manual_curation exon 1737250 1737333 . - . Parent=GSCOCT00024728001 | |
| 34095 chr10 manual_curation exon 1737540 1737631 . - . Parent=GSCOCT00024728001 | |
| 34096 chr10 manual_curation exon 1737773 1738245 . - . Parent=GSCOCT00024728001 | |
| 34097 chr10 manual_curation exon 1738759 1738930 . - . Parent=GSCOCT00024728001 | |
| 34098 chr10 manual_curation CDS 1733643 1733745 . - 2 Parent=GSCOCT00024728001 | |
| 34099 chr10 manual_curation CDS 1734677 1734870 . - 0 Parent=GSCOCT00024728001 | |
| 34100 chr10 manual_curation CDS 1734997 1735071 . - 0 Parent=GSCOCT00024728001 | |
| 34101 chr10 manual_curation CDS 1735534 1735641 . - 0 Parent=GSCOCT00024728001 | |
| 34102 chr10 manual_curation CDS 1735767 1735967 . - 0 Parent=GSCOCT00024728001 | |
| 34103 chr10 manual_curation CDS 1736169 1736246 . - 0 Parent=GSCOCT00024728001 | |
| 34104 chr10 manual_curation CDS 1737250 1737333 . - 0 Parent=GSCOCT00024728001 | |
| 34105 chr10 manual_curation CDS 1737540 1737631 . - 1 Parent=GSCOCT00024728001 | |
| 34106 chr10 manual_curation CDS 1737773 1738245 . - 2 Parent=GSCOCT00024728001 | |
| 34107 chr10 manual_curation CDS 1738759 1738868 . - 0 Parent=GSCOCT00024728001 | |
| 34108 chr10 manual_curation gene 1740617 1744290 . - . ID=GSCOCG00024729001;Name=Cc10_g02290 | |
| 34109 chr10 manual_curation mRNA 1740617 1744290 . - . ID=GSCOCT00024729001;Parent=GSCOCG00024729001;Name=Cc10_g02290 | |
| 34110 chr10 manual_curation polypeptide 1741135 1744290 . - . ID=GSCOCP00024729001;Dbxref=InterPro:IPR006594,InterPro:IPR006595,InterPro:IPR013144,InterPro:IPR019589,PFAM:PF10607,PROFILE:PS50896,PROFILE:PS50897,SMART:SM00668,SMART:SM00757,SwissProt:Q5ZKQ7,SwissProt:Q6PC55,SwissProt:Q9NWU2,TAIR:AT1G06060.1,TAIR:AT1G35470.2,TAIR:AT1G61150.1,TrEMBL:C6T9V4,TrEMBL:E0CPF7,TrEMBL:I1K7N3;Derives_from=GSCOCT00024729001;Name=Cc10_g02290;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:LisH and RanBPM domains containing protein,CC_functional_completeness:complete,CC_gene:RCJMB04_9k15,CC_gene:C20orf11,CC_gene:zgc;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024729001~ LisH and RanBPM domains containing protein~ RCJMB04_9k15~ complete;original_location=complement(join(1744258..1744290%2C1742955..1743096%2C1742265..1742412%2C1742110..1742185%2C1741911..1742022%2C1741635..1741726%2C1741135..1741179));owner=coffea | |
| 34111 chr10 manual_curation exon 1740617 1741179 . - . Parent=GSCOCT00024729001 | |
| 34112 chr10 manual_curation exon 1741635 1741726 . - . Parent=GSCOCT00024729001 | |
| 34113 chr10 manual_curation exon 1741911 1742022 . - . Parent=GSCOCT00024729001 | |
| 34114 chr10 manual_curation exon 1742110 1742185 . - . Parent=GSCOCT00024729001 | |
| 34115 chr10 manual_curation exon 1742265 1742412 . - . Parent=GSCOCT00024729001 | |
| 34116 chr10 manual_curation exon 1742955 1743096 . - . Parent=GSCOCT00024729001 | |
| 34117 chr10 manual_curation exon 1744258 1744290 . - . Parent=GSCOCT00024729001 | |
| 34118 chr10 manual_curation CDS 1741135 1741179 . - 0 Parent=GSCOCT00024729001 | |
| 34119 chr10 manual_curation CDS 1741635 1741726 . - 1 Parent=GSCOCT00024729001 | |
| 34120 chr10 manual_curation CDS 1741911 1742022 . - 0 Parent=GSCOCT00024729001 | |
| 34121 chr10 manual_curation CDS 1742110 1742185 . - 2 Parent=GSCOCT00024729001 | |
| 34122 chr10 manual_curation CDS 1742265 1742412 . - 1 Parent=GSCOCT00024729001 | |
| 34123 chr10 manual_curation CDS 1742955 1743096 . - 0 Parent=GSCOCT00024729001 | |
| 34124 chr10 manual_curation CDS 1744258 1744290 . - 0 Parent=GSCOCT00024729001 | |
| 34125 chr10 manual_curation gene 1746831 1750558 . + . ID=GSCOCG00024731001;Name=Cc10_g02300 | |
| 34126 chr10 manual_curation mRNA 1746831 1750558 . + . ID=GSCOCT00024731001;Parent=GSCOCG00024731001;Name=Cc10_g02300 | |
| 34127 chr10 manual_curation polypeptide 1747130 1750046 . + . ID=GSCOCP00024731001;Dbxref=InterPro:IPR000118,InterPro:IPR000169,InterPro:IPR000668,InterPro:IPR013128,InterPro:IPR013201,PANTHER:PTHR12411,PFAM:PF00112,PFAM:PF00396,PFAM:PF08246,PRINTS:PR00705,PROSITE:PS00139,PROSITE:PS00639,PROSITE:PS00640,SMART:SM00277,SMART:SM00645,SMART:SM00848,SwissProt:P25776,SwissProt:P25777,SwissProt:P43297,TAIR:AT1G09850.1,TAIR:AT1G47128.1,TAIR:AT3G19390.1,TrEMBL:B9H4H0,TrEMBL:B9R816,TrEMBL:E6NU59;Derives_from=GSCOCT00024731001;Name=Cc10_g02300;Ontology_term=CC_evidence_code:ISS,GO:0004197,GO:0006508,GO:0008234,CC_EC_number:3.4.22.14,PRODUCT:Cysteine proteinase RD21a,CC_functional_completeness:complete,CC_gene:RD21A,CC_gene:Os04g0650000,CC_gene:Os04g0670200;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024731001~ Cysteine proteinase RD21a~ RD21A~ complete;original_location=join(1747130..1747556%2C1748302..1748537%2C1748641..1748781%2C1748866..1749297%2C1749957..1750046);owner=coffea | |
| 34128 chr10 manual_curation exon 1746831 1747556 . + . Parent=GSCOCT00024731001 | |
| 34129 chr10 manual_curation exon 1748302 1748537 . + . Parent=GSCOCT00024731001 | |
| 34130 chr10 manual_curation exon 1748641 1748781 . + . Parent=GSCOCT00024731001 | |
| 34131 chr10 manual_curation exon 1748866 1749297 . + . Parent=GSCOCT00024731001 | |
| 34132 chr10 manual_curation exon 1749957 1750558 . + . Parent=GSCOCT00024731001 | |
| 34133 chr10 manual_curation CDS 1747130 1747556 . + 0 Parent=GSCOCT00024731001 | |
| 34134 chr10 manual_curation CDS 1748302 1748537 . + 1 Parent=GSCOCT00024731001 | |
| 34135 chr10 manual_curation CDS 1748641 1748781 . + 0 Parent=GSCOCT00024731001 | |
| 34136 chr10 manual_curation CDS 1748866 1749297 . + 0 Parent=GSCOCT00024731001 | |
| 34137 chr10 manual_curation CDS 1749957 1750046 . + 0 Parent=GSCOCT00024731001 | |
| 34138 chr10 manual_curation gene 1751016 1753371 . - . ID=GSCOCG00024732001;Name=Cc10_g02310 | |
| 34139 chr10 manual_curation mRNA 1751016 1753371 . - . ID=GSCOCT00024732001;Parent=GSCOCG00024732001;Name=Cc10_g02310 | |
| 34140 chr10 manual_curation polypeptide 1751907 1753371 . - . ID=GSCOCP00024732001;Dbxref=InterPro:IPR003111,PFAM:PF02190,SMART:SM00464,SwissProt:P36774,SwissProt:Q2IIK1,TAIR:AT1G18660.4,TAIR:AT1G19740.1,TAIR:AT1G75460.1,TrEMBL:F6H1K6,TrEMBL:I1JT74;Derives_from=GSCOCT00024732001;Name=Cc10_g02310;Ontology_term=CC_evidence_code:ISS,GO:0004176,GO:0006508,CC_EC_number:missing_EC_number,PRODUCT:ATP-dependent protease La (LON) domain protein,CC_functional_completeness:complete,CC_gene:lon2,CC_gene:lon;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024732001~ ATP-dependent protease La (LON) domain protein~ lon2~ complete;original_location=complement(join(1752532..1753371%2C1751907..1751936));owner=coffea | |
| 34141 chr10 manual_curation exon 1751016 1751936 . - . Parent=GSCOCT00024732001 | |
| 34142 chr10 manual_curation exon 1752532 1753371 . - . Parent=GSCOCT00024732001 | |
| 34143 chr10 manual_curation CDS 1751907 1751936 . - 0 Parent=GSCOCT00024732001 | |
| 34144 chr10 manual_curation CDS 1752532 1753371 . - 0 Parent=GSCOCT00024732001 | |
| 34145 chr10 manual_curation gene 1757645 1760022 . + . ID=GSCOCG00024733001;Name=Cc10_g02320 | |
| 34146 chr10 manual_curation mRNA 1757645 1760022 . + . ID=GSCOCT00024733001;Parent=GSCOCG00024733001;Name=Cc10_g02320 | |
| 34147 chr10 manual_curation polypeptide 1758013 1759740 . + . ID=GSCOCP00024733001;Dbxref=GENE3D:G3DSA:3.40.30.10,InterPro:IPR005746,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR013766,InterPro:IPR017936,InterPro:IPR017937,PANTHER:PTHR10438,PFAM:PF00085,PRINTS:PR00421,PROFILE:PS51352,PROSITE:PS00194,SUPERFAMILY:SSF52833,SwissProt:P29449,SwissProt:Q07090,SwissProt:Q43636,TAIR:AT1G19730.1,TAIR:AT1G45145.1,TAIR:AT3G51030.1,TIGRFAMs:TIGR01068,TrEMBL:B6EAX5,TrEMBL:C9DFC1,TrEMBL:Q6RJZ7;Derives_from=GSCOCT00024733001;Name=Cc10_g02320;Ontology_term=CC_evidence_code:ISS,GO:0006662,GO:0009055,GO:0015035,GO:0045454,CC_EC_number:missing_EC_number,PRODUCT:Thioredoxin H-type 1,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024733001~ Thioredoxin H-type 1~ unknown_gene~ complete;original_location=join(1758013..1758102%2C1759295..1759417%2C1759555..1759740);owner=coffea | |
| 34148 chr10 manual_curation exon 1757645 1758102 . + . Parent=GSCOCT00024733001 | |
| 34149 chr10 manual_curation exon 1759295 1759417 . + . Parent=GSCOCT00024733001 | |
| 34150 chr10 manual_curation exon 1759555 1760022 . + . Parent=GSCOCT00024733001 | |
| 34151 chr10 manual_curation CDS 1758013 1758102 . + 0 Parent=GSCOCT00024733001 | |
| 34152 chr10 manual_curation CDS 1759295 1759417 . + 0 Parent=GSCOCT00024733001 | |
| 34153 chr10 manual_curation CDS 1759555 1759740 . + 0 Parent=GSCOCT00024733001 | |
| 34154 chr10 manual_curation gene 1760115 1766246 . - . ID=GSCOCG00024734001;Name=Cc10_g02330 | |
| 34155 chr10 manual_curation mRNA 1760115 1766246 . - . ID=GSCOCT00024734001;Parent=GSCOCG00024734001;Name=Cc10_g02330 | |
| 34156 chr10 manual_curation polypeptide 1760782 1765993 . - . ID=GSCOCP00024734001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR000922,InterPro:IPR001944,InterPro:IPR008979,InterPro:IPR013781,InterPro:IPR017853,InterPro:IPR019801,PANTHER:PTHR23421,PFAM:PF01301,PFAM:PF02140,PRINTS:PR00742,PROFILE:PS50228,PROSITE:PS01182,SUPERFAMILY:SSF49785,SUPERFAMILY:SSF51445,SwissProt:Q10RB4,SwissProt:Q9SCV9,SwissProt:Q9SCW1,TAIR:AT1G45130.1,TAIR:AT3G13750.1,TAIR:AT4G36360.1,TrEMBL:A5AML4,TrEMBL:E0CPF1,TrEMBL:Q94B17;Derives_from=GSCOCT00024734001;Name=Cc10_g02330;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005529,GO:0005975,GO:0043169,CC_EC_number:3.2.1.23,PRODUCT:Beta-galactosidase 3,CC_functional_completeness:complete,CC_gene:BGAL3,CC_gene:Os03g0165400,CC_gene:BGAL1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024734001~ Beta-galactosidase 3~ BGAL3~ complete;original_location=complement(join(1765820..1765993%2C1765601..1765696%2C1765380..1765492%2C1765114..1765180%2C1764778..1764870%2C1764472..1764615%2C1764307..1764395%2C1764090..1764195%2C1763867..1763954%2C1763535..1763653%2C1763269..1763433%2C1762890..1763068%2C1762474..1762583%2C1762274..1762383%2C1761962..1762072%2C1761776..1761889%2C1761491..1761693%2C1761049..1761373%2C1760782..1760928));owner=coffea | |
| 34157 chr10 manual_curation exon 1760115 1760928 . - . Parent=GSCOCT00024734001 | |
| 34158 chr10 manual_curation exon 1761049 1761373 . - . Parent=GSCOCT00024734001 | |
| 34159 chr10 manual_curation exon 1761491 1761693 . - . Parent=GSCOCT00024734001 | |
| 34160 chr10 manual_curation exon 1761776 1761889 . - . Parent=GSCOCT00024734001 | |
| 34161 chr10 manual_curation exon 1761962 1762072 . - . Parent=GSCOCT00024734001 | |
| 34162 chr10 manual_curation exon 1762274 1762383 . - . Parent=GSCOCT00024734001 | |
| 34163 chr10 manual_curation exon 1762474 1762583 . - . Parent=GSCOCT00024734001 | |
| 34164 chr10 manual_curation exon 1762890 1763068 . - . Parent=GSCOCT00024734001 | |
| 34165 chr10 manual_curation exon 1763269 1763433 . - . Parent=GSCOCT00024734001 | |
| 34166 chr10 manual_curation exon 1763535 1763653 . - . Parent=GSCOCT00024734001 | |
| 34167 chr10 manual_curation exon 1763867 1763954 . - . Parent=GSCOCT00024734001 | |
| 34168 chr10 manual_curation exon 1764090 1764195 . - . Parent=GSCOCT00024734001 | |
| 34169 chr10 manual_curation exon 1764307 1764395 . - . Parent=GSCOCT00024734001 | |
| 34170 chr10 manual_curation exon 1764472 1764615 . - . Parent=GSCOCT00024734001 | |
| 34171 chr10 manual_curation exon 1764778 1764870 . - . Parent=GSCOCT00024734001 | |
| 34172 chr10 manual_curation exon 1765114 1765180 . - . Parent=GSCOCT00024734001 | |
| 34173 chr10 manual_curation exon 1765380 1765492 . - . Parent=GSCOCT00024734001 | |
| 34174 chr10 manual_curation exon 1765601 1765696 . - . Parent=GSCOCT00024734001 | |
| 34175 chr10 manual_curation exon 1765820 1766246 . - . Parent=GSCOCT00024734001 | |
| 34176 chr10 manual_curation CDS 1760782 1760928 . - 0 Parent=GSCOCT00024734001 | |
| 34177 chr10 manual_curation CDS 1761049 1761373 . - 2 Parent=GSCOCT00024734001 | |
| 34178 chr10 manual_curation CDS 1761491 1761693 . - 0 Parent=GSCOCT00024734001 | |
| 34179 chr10 manual_curation CDS 1761776 1761889 . - 0 Parent=GSCOCT00024734001 | |
| 34180 chr10 manual_curation CDS 1761962 1762072 . - 0 Parent=GSCOCT00024734001 | |
| 34181 chr10 manual_curation CDS 1762274 1762383 . - 1 Parent=GSCOCT00024734001 | |
| 34182 chr10 manual_curation CDS 1762474 1762583 . - 2 Parent=GSCOCT00024734001 | |
| 34183 chr10 manual_curation CDS 1762890 1763068 . - 0 Parent=GSCOCT00024734001 | |
| 34184 chr10 manual_curation CDS 1763269 1763433 . - 0 Parent=GSCOCT00024734001 | |
| 34185 chr10 manual_curation CDS 1763535 1763653 . - 1 Parent=GSCOCT00024734001 | |
| 34186 chr10 manual_curation CDS 1763867 1763954 . - 0 Parent=GSCOCT00024734001 | |
| 34187 chr10 manual_curation CDS 1764090 1764195 . - 2 Parent=GSCOCT00024734001 | |
| 34188 chr10 manual_curation CDS 1764307 1764395 . - 0 Parent=GSCOCT00024734001 | |
| 34189 chr10 manual_curation CDS 1764472 1764615 . - 0 Parent=GSCOCT00024734001 | |
| 34190 chr10 manual_curation CDS 1764778 1764870 . - 0 Parent=GSCOCT00024734001 | |
| 34191 chr10 manual_curation CDS 1765114 1765180 . - 2 Parent=GSCOCT00024734001 | |
| 34192 chr10 manual_curation CDS 1765380 1765492 . - 0 Parent=GSCOCT00024734001 | |
| 34193 chr10 manual_curation CDS 1765601 1765696 . - 0 Parent=GSCOCT00024734001 | |
| 34194 chr10 manual_curation CDS 1765820 1765993 . - 0 Parent=GSCOCT00024734001 | |
| 34195 chr10 manual_curation gene 1769225 1772405 . + . ID=GSCOCG00024735001;Name=Cc10_g02340 | |
| 34196 chr10 manual_curation mRNA 1769225 1772405 . + . ID=GSCOCT00024735001;Parent=GSCOCG00024735001;Name=Cc10_g02340 | |
| 34197 chr10 manual_curation polypeptide 1769591 1771957 . + . ID=GSCOCP00024735001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q7Y211,SwissProt:Q9FXH1,SwissProt:Q9SV26,TAIR:AT1G19720.1,TAIR:AT3G57430.1,TAIR:AT4G01030.1,TIGRFAMs:TIGR00756,TrEMBL:F6H1K4,TrEMBL:I1JHD5,TrEMBL:I1MBB8;Derives_from=GSCOCT00024735001;Name=Cc10_g02340;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At1g19720,CC_functional_completeness:complete,CC_gene:DYW7,CC_gene:PCMP-H65,CC_gene:PCMP-H81;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024735001~ Pentatricopeptide repeat-containing protein At1g19720~ DYW7~ complete;original_location=1769591..1771957;owner=coffea | |
| 34198 chr10 manual_curation exon 1769225 1772405 . + . Parent=GSCOCT00024735001 | |
| 34199 chr10 manual_curation CDS 1769591 1771957 . + 0 Parent=GSCOCT00024735001 | |
| 34200 chr10 manual_curation gene 1773191 1776127 . + . ID=GSCOCG00024736001;Name=Cc10_g02350 | |
| 34201 chr10 manual_curation mRNA 1773191 1776127 . + . ID=GSCOCT00024736001;Parent=GSCOCG00024736001;Name=Cc10_g02350 | |
| 34202 chr10 manual_curation polypeptide 1773244 1775723 . + . ID=GSCOCP00024736001;Dbxref=GENE3D:G3DSA:2.100.10.30,InterPro:IPR001229,PFAM:PF01419,SUPERFAMILY:SSF51101,SwissProt:O04312,SwissProt:P82859,SwissProt:P83304,TAIR:AT1G19715.3,TAIR:AT1G73040.1,TAIR:AT3G16440.1,TrEMBL:B9R809,TrEMBL:E0CPE9,TrEMBL:G7JZI6;Derives_from=GSCOCT00024736001;Name=Cc10_g02350;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Agglutinin,CC_functional_completeness:complete,CC_gene:At3g16440;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024736001~ Putative Agglutinin~ At3g16440~ complete;original_location=join(1773244..1773249%2C1773348..1773551%2C1773683..1774150%2C1774242..1774487%2C1774595..1774960%2C1775051..1775269%2C1775424..1775723);owner=coffea | |
| 34203 chr10 manual_curation exon 1773191 1773249 . + . Parent=GSCOCT00024736001 | |
| 34204 chr10 manual_curation exon 1773348 1773551 . + . Parent=GSCOCT00024736001 | |
| 34205 chr10 manual_curation exon 1773683 1774150 . + . Parent=GSCOCT00024736001 | |
| 34206 chr10 manual_curation exon 1774242 1774487 . + . Parent=GSCOCT00024736001 | |
| 34207 chr10 manual_curation exon 1774595 1774960 . + . Parent=GSCOCT00024736001 | |
| 34208 chr10 manual_curation exon 1775051 1775269 . + . Parent=GSCOCT00024736001 | |
| 34209 chr10 manual_curation exon 1775424 1776127 . + . Parent=GSCOCT00024736001 | |
| 34210 chr10 manual_curation CDS 1773244 1773249 . + 0 Parent=GSCOCT00024736001 | |
| 34211 chr10 manual_curation CDS 1773348 1773551 . + 0 Parent=GSCOCT00024736001 | |
| 34212 chr10 manual_curation CDS 1773683 1774150 . + 0 Parent=GSCOCT00024736001 | |
| 34213 chr10 manual_curation CDS 1774242 1774487 . + 0 Parent=GSCOCT00024736001 | |
| 34214 chr10 manual_curation CDS 1774595 1774960 . + 0 Parent=GSCOCT00024736001 | |
| 34215 chr10 manual_curation CDS 1775051 1775269 . + 0 Parent=GSCOCT00024736001 | |
| 34216 chr10 manual_curation CDS 1775424 1775723 . + 0 Parent=GSCOCT00024736001 | |
| 34217 chr10 manual_curation gene 1776213 1778943 . - . ID=GSCOCG00024737001;Name=Cc10_g02360 | |
| 34218 chr10 manual_curation mRNA 1776213 1778943 . - . ID=GSCOCT00024737001;Parent=GSCOCG00024737001;Name=Cc10_g02360 | |
| 34219 chr10 manual_curation polypeptide 1776601 1778841 . - . ID=GSCOCP00024737001;Dbxref=GENE3D:G3DSA:3.10.110.10,InterPro:IPR000608,InterPro:IPR016135,PFAM:PF00179,PROFILE:PS50127,PROSITE:PS00183,SMART:SM00212,SUPERFAMILY:SSF54495,SwissProt:P42743,SwissProt:Q9FMM0,SwissProt:Q9FWT2,TAIR:AT1G45050.1,TAIR:AT1G75440.1,TAIR:AT5G42990.1,TrEMBL:A6MUS6,TrEMBL:A9PC20,TrEMBL:B9R805;Derives_from=GSCOCT00024737001;Name=Cc10_g02360;Ontology_term=CC_evidence_code:ISS,GO:0019787,GO:0043687,GO:0051246,CC_EC_number:6.3.2.19,PRODUCT:Probable ubiquitin-conjugating enzyme E2 16,CC_functional_completeness:complete,CC_gene:UBC16,CC_gene:UBC15,CC_gene:UBC18;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024737001~ Probable ubiquitin-conjugating enzyme E2 16~ UBC16~ complete;original_location=complement(join(1778812..1778841%2C1778582..1778685%2C1778369..1778471%2C1778083..1778146%2C1776801..1776889%2C1776601..1776696));owner=coffea | |
| 34220 chr10 manual_curation exon 1776213 1776696 . - . Parent=GSCOCT00024737001 | |
| 34221 chr10 manual_curation exon 1776801 1776889 . - . Parent=GSCOCT00024737001 | |
| 34222 chr10 manual_curation exon 1778083 1778146 . - . Parent=GSCOCT00024737001 | |
| 34223 chr10 manual_curation exon 1778369 1778471 . - . Parent=GSCOCT00024737001 | |
| 34224 chr10 manual_curation exon 1778582 1778685 . - . Parent=GSCOCT00024737001 | |
| 34225 chr10 manual_curation exon 1778812 1778943 . - . Parent=GSCOCT00024737001 | |
| 34226 chr10 manual_curation CDS 1776601 1776696 . - 0 Parent=GSCOCT00024737001 | |
| 34227 chr10 manual_curation CDS 1776801 1776889 . - 1 Parent=GSCOCT00024737001 | |
| 34228 chr10 manual_curation CDS 1778083 1778146 . - 0 Parent=GSCOCT00024737001 | |
| 34229 chr10 manual_curation CDS 1778369 1778471 . - 2 Parent=GSCOCT00024737001 | |
| 34230 chr10 manual_curation CDS 1778582 1778685 . - 0 Parent=GSCOCT00024737001 | |
| 34231 chr10 manual_curation CDS 1778812 1778841 . - 0 Parent=GSCOCT00024737001 | |
| 34232 chr10 manual_curation gene 1782046 1787397 . - . ID=GSCOCG00024738001;Name=Cc10_g02370 | |
| 34233 chr10 manual_curation mRNA 1782046 1787397 . - . ID=GSCOCT00024738001;Parent=GSCOCG00024738001;Name=Cc10_g02370 | |
| 34234 chr10 manual_curation polypeptide 1782282 1787176 . - . ID=GSCOCP00024738001;Dbxref=GENE3D:G3DSA:4.10.260.20,InterPro:IPR003149,InterPro:IPR004108,InterPro:IPR009016,PFAM:PF02256,PFAM:PF02906,SMART:SM00902,SUPERFAMILY:SSF53920,SwissProt:A7SDA8,SwissProt:B4KFU7,SwissProt:Q54F30,TAIR:AT4G16440.1,TrEMBL:D7U6R8,TrEMBL:I1KNK2,TrEMBL:I1MQZ3;Derives_from=GSCOCT00024738001;Name=Cc10_g02370;Ontology_term=CC_evidence_code:ISS,CC_EC_number:1.12.7.2,PRODUCT:Putative Probable cytosolic Fe-S cluster assembly factor narfl,CC_functional_completeness:complete,CC_gene:narfl,CC_gene:v1g210509,CC_gene:GI11683;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024738001~ Putative Probable cytosolic Fe-S cluster assembly factor narfl~ narfl~ complete;original_location=complement(join(1787015..1787176%2C1786531..1786613%2C1785664..1785835%2C1785379..1785565%2C1785015..1785141%2C1784170..1784349%2C1783877..1784080%2C1783624..1783795%2C1783077..1783203%2C1782896..1782978%2C1782282..1782434));owner=coffea | |
| 34235 chr10 manual_curation exon 1782046 1782434 . - . Parent=GSCOCT00024738001 | |
| 34236 chr10 manual_curation exon 1782896 1782978 . - . Parent=GSCOCT00024738001 | |
| 34237 chr10 manual_curation exon 1783077 1783203 . - . Parent=GSCOCT00024738001 | |
| 34238 chr10 manual_curation exon 1783624 1783795 . - . Parent=GSCOCT00024738001 | |
| 34239 chr10 manual_curation exon 1783877 1784080 . - . Parent=GSCOCT00024738001 | |
| 34240 chr10 manual_curation exon 1784170 1784349 . - . Parent=GSCOCT00024738001 | |
| 34241 chr10 manual_curation exon 1785015 1785141 . - . Parent=GSCOCT00024738001 | |
| 34242 chr10 manual_curation exon 1785379 1785565 . - . Parent=GSCOCT00024738001 | |
| 34243 chr10 manual_curation exon 1785664 1785835 . - . Parent=GSCOCT00024738001 | |
| 34244 chr10 manual_curation exon 1786531 1786613 . - . Parent=GSCOCT00024738001 | |
| 34245 chr10 manual_curation exon 1787015 1787397 . - . Parent=GSCOCT00024738001 | |
| 34246 chr10 manual_curation CDS 1782282 1782434 . - 0 Parent=GSCOCT00024738001 | |
| 34247 chr10 manual_curation CDS 1782896 1782978 . - 1 Parent=GSCOCT00024738001 | |
| 34248 chr10 manual_curation CDS 1783077 1783203 . - 0 Parent=GSCOCT00024738001 | |
| 34249 chr10 manual_curation CDS 1783624 1783795 . - 2 Parent=GSCOCT00024738001 | |
| 34250 chr10 manual_curation CDS 1783877 1784080 . - 2 Parent=GSCOCT00024738001 | |
| 34251 chr10 manual_curation CDS 1784170 1784349 . - 2 Parent=GSCOCT00024738001 | |
| 34252 chr10 manual_curation CDS 1785015 1785141 . - 1 Parent=GSCOCT00024738001 | |
| 34253 chr10 manual_curation CDS 1785379 1785565 . - 0 Parent=GSCOCT00024738001 | |
| 34254 chr10 manual_curation CDS 1785664 1785835 . - 2 Parent=GSCOCT00024738001 | |
| 34255 chr10 manual_curation CDS 1786531 1786613 . - 0 Parent=GSCOCT00024738001 | |
| 34256 chr10 manual_curation CDS 1787015 1787176 . - 0 Parent=GSCOCT00024738001 | |
| 34257 chr10 manual_curation gene 1790055 1796655 . - . ID=GSCOCG00024739001;Name=Cc10_g02380 | |
| 34258 chr10 manual_curation mRNA 1790055 1796655 . - . ID=GSCOCT00024739001;Parent=GSCOCG00024739001;Name=Cc10_g02380 | |
| 34259 chr10 manual_curation polypeptide 1790452 1796172 . - . ID=GSCOCP00024739001;Dbxref=InterPro:IPR006093,InterPro:IPR006094,InterPro:IPR015345,InterPro:IPR016164,InterPro:IPR016166,PFAM:PF01565,PFAM:PF09265,PROFILE:PS51387,PROSITE:PS00862,SUPERFAMILY:SSF55103,SUPERFAMILY:SSF56176,SwissProt:O22213,SwissProt:Q5ZAY9,SwissProt:Q67YU0,TAIR:AT1G75450.1,TAIR:AT2G41510.1,TAIR:AT3G63440.1,TrEMBL:B9GRI7,TrEMBL:B9H4G1,TrEMBL:B9R807;Derives_from=GSCOCT00024739001;Name=Cc10_g02380;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0009690,GO:0016491,GO:0019139,GO:0050660,GO:0055114,CC_EC_number:1.5.99.12,CC_EC_number:1.5.99.12,PRODUCT:Cytokinin dehydrogenase 5,CC_functional_completeness:complete,CC_gene:CKX5,CC_gene:CKX1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024739001~ Cytokinin dehydrogenase 5~ CKX5~ complete;original_location=complement(join(1795575..1796172%2C1794886..1795013%2C1794153..1794434%2C1792691..1792959%2C1790452..1790785));owner=coffea | |
| 34260 chr10 manual_curation exon 1796308 1796655 . - . Parent=GSCOCT00024739001 | |
| 34261 chr10 manual_curation exon 1790055 1790785 . - . Parent=GSCOCT00024739001 | |
| 34262 chr10 manual_curation exon 1792691 1792959 . - . Parent=GSCOCT00024739001 | |
| 34263 chr10 manual_curation exon 1794153 1794434 . - . Parent=GSCOCT00024739001 | |
| 34264 chr10 manual_curation exon 1794886 1795013 . - . Parent=GSCOCT00024739001 | |
| 34265 chr10 manual_curation exon 1795575 1796218 . - . Parent=GSCOCT00024739001 | |
| 34266 chr10 manual_curation CDS 1790452 1790785 . - 2 Parent=GSCOCT00024739001 | |
| 34267 chr10 manual_curation CDS 1792691 1792959 . - 0 Parent=GSCOCT00024739001 | |
| 34268 chr10 manual_curation CDS 1794153 1794434 . - 0 Parent=GSCOCT00024739001 | |
| 34269 chr10 manual_curation CDS 1794886 1795013 . - 1 Parent=GSCOCT00024739001 | |
| 34270 chr10 manual_curation CDS 1795575 1796172 . - 0 Parent=GSCOCT00024739001 | |
| 34271 chr10 manual_curation gene 1807626 1811294 . + . ID=GSCOCG00024740001;Name=Cc10_g02390 | |
| 34272 chr10 manual_curation mRNA 1807626 1811294 . + . ID=GSCOCT00024740001;Parent=GSCOCG00024740001;Name=Cc10_g02390 | |
| 34273 chr10 manual_curation polypeptide 1807877 1811037 . + . ID=GSCOCP00024740001;Dbxref=GENE3D:G3DSA:3.40.1010.10,InterPro:IPR000878,InterPro:IPR008189,InterPro:IPR014777,InterPro:IPR018063,PFAM:PF00590,PROSITE:PS01296,SUPERFAMILY:SSF53790,SwissProt:P45298,SwissProt:P74038,SwissProt:Q9KGL2,TAIR:AT1G45110.1,TIGRFAMs:TIGR00096,TrEMBL:B9R806,TrEMBL:D7KPR9,TrEMBL:Q6NQA0;Derives_from=GSCOCT00024740001;Name=Cc10_g02390;Ontology_term=CC_evidence_code:ISS,GO:0008152,GO:0008168,CC_EC_number:missing_EC_number,PRODUCT:Putative Ribosomal RNA small subunit methyltransferase I,CC_functional_completeness:modules,CC_gene:rsmI;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024740001~ Putative Ribosomal RNA small subunit methyltransferase I~ rsmI~ modules;original_location=join(1807877..1808056%2C1808285..1808352%2C1808477..1808573%2C1808665..1808793%2C1809068..1809176%2C1809272..1809416%2C1809529..1809571%2C1810226..1810399%2C1810936..1811037);owner=coffea | |
| 34274 chr10 manual_curation exon 1811244 1811294 . + . Parent=GSCOCT00024740001 | |
| 34275 chr10 manual_curation exon 1807626 1808056 . + . Parent=GSCOCT00024740001 | |
| 34276 chr10 manual_curation exon 1808285 1808352 . + . Parent=GSCOCT00024740001 | |
| 34277 chr10 manual_curation exon 1808477 1808573 . + . Parent=GSCOCT00024740001 | |
| 34278 chr10 manual_curation exon 1808665 1808793 . + . Parent=GSCOCT00024740001 | |
| 34279 chr10 manual_curation exon 1809068 1809176 . + . Parent=GSCOCT00024740001 | |
| 34280 chr10 manual_curation exon 1809272 1809416 . + . Parent=GSCOCT00024740001 | |
| 34281 chr10 manual_curation exon 1809529 1809571 . + . Parent=GSCOCT00024740001 | |
| 34282 chr10 manual_curation exon 1810226 1810399 . + . Parent=GSCOCT00024740001 | |
| 34283 chr10 manual_curation exon 1810936 1811067 . + . Parent=GSCOCT00024740001 | |
| 34284 chr10 manual_curation CDS 1807877 1808056 . + 0 Parent=GSCOCT00024740001 | |
| 34285 chr10 manual_curation CDS 1808285 1808352 . + 0 Parent=GSCOCT00024740001 | |
| 34286 chr10 manual_curation CDS 1808477 1808573 . + 2 Parent=GSCOCT00024740001 | |
| 34287 chr10 manual_curation CDS 1808665 1808793 . + 0 Parent=GSCOCT00024740001 | |
| 34288 chr10 manual_curation CDS 1809068 1809176 . + 0 Parent=GSCOCT00024740001 | |
| 34289 chr10 manual_curation CDS 1809272 1809416 . + 1 Parent=GSCOCT00024740001 | |
| 34290 chr10 manual_curation CDS 1809529 1809571 . + 2 Parent=GSCOCT00024740001 | |
| 34291 chr10 manual_curation CDS 1810226 1810399 . + 0 Parent=GSCOCT00024740001 | |
| 34292 chr10 manual_curation CDS 1810936 1811037 . + 0 Parent=GSCOCT00024740001 | |
| 34293 chr10 manual_curation gene 1813934 1818384 . + . ID=GSCOCG00024742001;Name=Cc10_g02400 | |
| 34294 chr10 manual_curation mRNA 1813934 1818384 . + . ID=GSCOCT00024742001;Parent=GSCOCG00024742001;Name=Cc10_g02400 | |
| 34295 chr10 manual_curation polypeptide 1814945 1818112 . + . ID=GSCOCP00024742001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001356,InterPro:IPR006563,InterPro:IPR009057,InterPro:IPR012287,PFAM:PF00046,PFAM:PF07526,PROFILE:PS50071,SMART:SM00389,SMART:SM00574,SUPERFAMILY:SSF46689,SwissProt:O65685,SwissProt:Q9FXG8,SwissProt:Q9SIW1,TAIR:AT1G19700.1,TAIR:AT2G16400.1,TAIR:AT4G34610.1,TrEMBL:A5BIM7,TrEMBL:B9GRJ1,TrEMBL:F6H1K0;Derives_from=GSCOCT00024742001;Name=Cc10_g02400;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,GO:0043565,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:BLH7,CC_gene:BLH6,CC_gene:BLH10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024742001~ Putative uncharacterized protein~ BLH7~ complete;original_location=join(1814945..1815883%2C1816514..1816890%2C1816981..1817041%2C1817444..1818112);owner=coffea | |
| 34296 chr10 manual_curation exon 1813934 1814201 . + . Parent=GSCOCT00024742001 | |
| 34297 chr10 manual_curation exon 1814833 1815883 . + . Parent=GSCOCT00024742001 | |
| 34298 chr10 manual_curation exon 1816514 1816890 . + . Parent=GSCOCT00024742001 | |
| 34299 chr10 manual_curation exon 1816981 1817041 . + . Parent=GSCOCT00024742001 | |
| 34300 chr10 manual_curation exon 1817444 1818384 . + . Parent=GSCOCT00024742001 | |
| 34301 chr10 manual_curation CDS 1814945 1815883 . + 0 Parent=GSCOCT00024742001 | |
| 34302 chr10 manual_curation CDS 1816514 1816890 . + 0 Parent=GSCOCT00024742001 | |
| 34303 chr10 manual_curation CDS 1816981 1817041 . + 2 Parent=GSCOCT00024742001 | |
| 34304 chr10 manual_curation CDS 1817444 1818112 . + 0 Parent=GSCOCT00024742001 | |
| 34305 chr10 manual_curation gene 1820797 1822464 . + . ID=GSCOCG00024743001;Name=Cc10_g02410 | |
| 34306 chr10 manual_curation mRNA 1820797 1822464 . + . ID=GSCOCT00024743001;Parent=GSCOCG00024743001;Name=Cc10_g02410 | |
| 34307 chr10 manual_curation polypeptide 1820797 1822464 . + . ID=GSCOCP00024743001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001356,InterPro:IPR006563,InterPro:IPR009057,InterPro:IPR012287,PFAM:PF00046,PFAM:PF07526,PROFILE:PS50071,SMART:SM00389,SMART:SM00574,SUPERFAMILY:SSF46689,SwissProt:Q1PFD1,SwissProt:Q9FWS9,SwissProt:Q9SIW1,TAIR:AT1G75410.1,TAIR:AT1G75430.1,TAIR:AT2G16400.1,TrEMBL:B9GRJ0,TrEMBL:B9R804,TrEMBL:E0CQI9;Derives_from=GSCOCT00024743001;Name=Cc10_g02410;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,GO:0043565,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:BEL1-like homeodomain protein 11,CC_functional_completeness:modules,CC_gene:BLH11,CC_gene:BLH3,CC_gene:BLH7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024743001~ BEL1-like homeodomain protein 11~ BLH11~ modules;original_location=join(1820797..1821130%2C1821212..1821597%2C1821704..1822083%2C1822170..1822230%2C1822321..1822464);owner=coffea | |
| 34308 chr10 manual_curation exon 1820797 1821130 . + . Parent=GSCOCT00024743001 | |
| 34309 chr10 manual_curation exon 1821212 1821597 . + . Parent=GSCOCT00024743001 | |
| 34310 chr10 manual_curation exon 1821704 1822083 . + . Parent=GSCOCT00024743001 | |
| 34311 chr10 manual_curation exon 1822170 1822230 . + . Parent=GSCOCT00024743001 | |
| 34312 chr10 manual_curation exon 1822321 1822464 . + . Parent=GSCOCT00024743001 | |
| 34313 chr10 manual_curation CDS 1820797 1821130 . + 0 Parent=GSCOCT00024743001 | |
| 34314 chr10 manual_curation CDS 1821212 1821597 . + 1 Parent=GSCOCT00024743001 | |
| 34315 chr10 manual_curation CDS 1821704 1822083 . + 0 Parent=GSCOCT00024743001 | |
| 34316 chr10 manual_curation CDS 1822170 1822230 . + 2 Parent=GSCOCT00024743001 | |
| 34317 chr10 manual_curation CDS 1822321 1822464 . + 0 Parent=GSCOCT00024743001 | |
| 34318 chr10 manual_curation gene 1828645 1833087 . + . ID=GSCOCG00024744001;Name=Cc10_g02420 | |
| 34319 chr10 manual_curation mRNA 1828645 1833087 . + . ID=GSCOCT00024744001;Parent=GSCOCG00024744001;Name=Cc10_g02420 | |
| 34320 chr10 manual_curation polypeptide 1828748 1832620 . + . ID=GSCOCP00024744001;Dbxref=InterPro:IPR002917,InterPro:IPR005225,InterPro:IPR006073,InterPro:IPR016496,PFAM:PF01926,PRINTS:PR00326,SwissProt:D3FTV4,SwissProt:D9R4W7,SwissProt:P25519,TAIR:AT3G49725.1,TAIR:AT5G57960.1,TIGRFAMs:TIGR00231,TIGRFAMs:TIGR03156,TrEMBL:B9R801,TrEMBL:E0CQI8,TrEMBL:I1MXZ3;Derives_from=GSCOCT00024744001;Name=Cc10_g02420;Ontology_term=CC_evidence_code:ISS,GO:0005525,GO:0005622,CC_EC_number:missing_EC_number,PRODUCT:Putative GTPase HflX,CC_functional_completeness:modules,CC_gene:hflX;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024744001~ Putative GTPase HflX~ hflX~ modules;original_location=join(1828748..1829167%2C1829429..1829571%2C1829884..1830000%2C1830460..1830574%2C1830647..1830784%2C1830884..1830979%2C1831089..1831202%2C1831449..1831517%2C1831649..1831719%2C1831795..1831888%2C1832092..1832220%2C1832341..1832430%2C1832528..1832620);owner=coffea | |
| 34321 chr10 manual_curation exon 1828645 1829167 . + . Parent=GSCOCT00024744001 | |
| 34322 chr10 manual_curation exon 1829429 1829571 . + . Parent=GSCOCT00024744001 | |
| 34323 chr10 manual_curation exon 1829884 1830000 . + . Parent=GSCOCT00024744001 | |
| 34324 chr10 manual_curation exon 1830460 1830574 . + . Parent=GSCOCT00024744001 | |
| 34325 chr10 manual_curation exon 1830647 1830784 . + . Parent=GSCOCT00024744001 | |
| 34326 chr10 manual_curation exon 1830884 1830979 . + . Parent=GSCOCT00024744001 | |
| 34327 chr10 manual_curation exon 1831089 1831202 . + . Parent=GSCOCT00024744001 | |
| 34328 chr10 manual_curation exon 1831449 1831517 . + . Parent=GSCOCT00024744001 | |
| 34329 chr10 manual_curation exon 1831649 1831719 . + . Parent=GSCOCT00024744001 | |
| 34330 chr10 manual_curation exon 1831795 1831888 . + . Parent=GSCOCT00024744001 | |
| 34331 chr10 manual_curation exon 1832092 1832220 . + . Parent=GSCOCT00024744001 | |
| 34332 chr10 manual_curation exon 1832341 1832430 . + . Parent=GSCOCT00024744001 | |
| 34333 chr10 manual_curation exon 1832528 1833087 . + . Parent=GSCOCT00024744001 | |
| 34334 chr10 manual_curation CDS 1828748 1829167 . + 0 Parent=GSCOCT00024744001 | |
| 34335 chr10 manual_curation CDS 1829429 1829571 . + 0 Parent=GSCOCT00024744001 | |
| 34336 chr10 manual_curation CDS 1829884 1830000 . + 2 Parent=GSCOCT00024744001 | |
| 34337 chr10 manual_curation CDS 1830460 1830574 . + 2 Parent=GSCOCT00024744001 | |
| 34338 chr10 manual_curation CDS 1830647 1830784 . + 0 Parent=GSCOCT00024744001 | |
| 34339 chr10 manual_curation CDS 1830884 1830979 . + 0 Parent=GSCOCT00024744001 | |
| 34340 chr10 manual_curation CDS 1831089 1831202 . + 0 Parent=GSCOCT00024744001 | |
| 34341 chr10 manual_curation CDS 1831449 1831517 . + 0 Parent=GSCOCT00024744001 | |
| 34342 chr10 manual_curation CDS 1831649 1831719 . + 0 Parent=GSCOCT00024744001 | |
| 34343 chr10 manual_curation CDS 1831795 1831888 . + 2 Parent=GSCOCT00024744001 | |
| 34344 chr10 manual_curation CDS 1832092 1832220 . + 0 Parent=GSCOCT00024744001 | |
| 34345 chr10 manual_curation CDS 1832341 1832430 . + 0 Parent=GSCOCT00024744001 | |
| 34346 chr10 manual_curation CDS 1832528 1832620 . + 0 Parent=GSCOCT00024744001 | |
| 34347 chr10 manual_curation gene 1834025 1835762 . + . ID=GSCOCG00024745001;Name=Cc10_g02430 | |
| 34348 chr10 manual_curation mRNA 1834025 1835762 . + . ID=GSCOCT00024745001;Parent=GSCOCG00024745001;Name=Cc10_g02430 | |
| 34349 chr10 manual_curation polypeptide 1834025 1835545 . + . ID=GSCOCP00024745001;Dbxref=InterPro:IPR000823,InterPro:IPR002016,InterPro:IPR010255,InterPro:IPR019793,PFAM:PF00141,PRINTS:PR00458,PRINTS:PR00461,PROFILE:PS50873,PROSITE:PS00435,SUPERFAMILY:SSF48113,SwissProt:O23237,SwissProt:Q96512,SwissProt:Q9FJZ9,TAIR:AT1G44970.1,TAIR:AT4G36430.1,TAIR:AT5G66390.1,TrEMBL:B9R800,TrEMBL:F6H1J9,TrEMBL:Q94IQ0;Derives_from=GSCOCT00024745001;Name=Cc10_g02430;Ontology_term=CC_evidence_code:ISS,GO:0004601,GO:0006979,GO:0020037,GO:0055114,CC_EC_number:1.11.1.7,PRODUCT:Peroxidase 9,CC_functional_completeness:complete,CC_gene:PER9,CC_gene:PER72,CC_gene:PER49;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024745001~ Peroxidase 9~ PER9~ complete;original_location=join(1834025..1834267%2C1834406..1834597%2C1834810..1834975%2C1835133..1835545);owner=coffea | |
| 34350 chr10 manual_curation exon 1834025 1834267 . + . Parent=GSCOCT00024745001 | |
| 34351 chr10 manual_curation exon 1834406 1834597 . + . Parent=GSCOCT00024745001 | |
| 34352 chr10 manual_curation exon 1834810 1834975 . + . Parent=GSCOCT00024745001 | |
| 34353 chr10 manual_curation exon 1835133 1835762 . + . Parent=GSCOCT00024745001 | |
| 34354 chr10 manual_curation CDS 1834025 1834267 . + 0 Parent=GSCOCT00024745001 | |
| 34355 chr10 manual_curation CDS 1834406 1834597 . + 0 Parent=GSCOCT00024745001 | |
| 34356 chr10 manual_curation CDS 1834810 1834975 . + 0 Parent=GSCOCT00024745001 | |
| 34357 chr10 manual_curation CDS 1835133 1835545 . + 1 Parent=GSCOCT00024745001 | |
| 34358 chr10 manual_curation gene 1838678 1842023 . + . ID=GSCOCG00024746001;Name=Cc10_g02440 | |
| 34359 chr10 manual_curation mRNA 1838678 1842023 . + . ID=GSCOCT00024746001;Parent=GSCOCG00024746001;Name=Cc10_g02440 | |
| 34360 chr10 manual_curation polypeptide 1838941 1842023 . + . ID=GSCOCP00024746001;Dbxref=InterPro:IPR001296,PFAM:PF00534,TAIR:AT1G19710.1,TAIR:AT1G52420.1,TAIR:AT1G75420.1,TrEMBL:B9R7Z9,TrEMBL:F6H1J8,TrEMBL:I1K7P4;Derives_from=GSCOCT00024746001;Name=Cc10_g02440;Ontology_term=CC_evidence_code:ISS,GO:0009058,CC_EC_number:missing_EC_number,PRODUCT:UDP-Glycosyltransferase superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024746001~ UDP-Glycosyltransferase superfamily protein~ unknown_gene~ complete;original_location=join(1838941..1838989%2C1839186..1839328%2C1839459..1839730%2C1839820..1839974%2C1840663..1840925%2C1841193..1841255%2C1841772..1842023);owner=coffea | |
| 34361 chr10 manual_curation exon 1838678 1838989 . + . Parent=GSCOCT00024746001 | |
| 34362 chr10 manual_curation exon 1839186 1839328 . + . Parent=GSCOCT00024746001 | |
| 34363 chr10 manual_curation exon 1839459 1839730 . + . Parent=GSCOCT00024746001 | |
| 34364 chr10 manual_curation exon 1839820 1839974 . + . Parent=GSCOCT00024746001 | |
| 34365 chr10 manual_curation exon 1840663 1840925 . + . Parent=GSCOCT00024746001 | |
| 34366 chr10 manual_curation exon 1841193 1841255 . + . Parent=GSCOCT00024746001 | |
| 34367 chr10 manual_curation exon 1841772 1842023 . + . Parent=GSCOCT00024746001 | |
| 34368 chr10 manual_curation CDS 1838941 1838989 . + 0 Parent=GSCOCT00024746001 | |
| 34369 chr10 manual_curation CDS 1839186 1839328 . + 1 Parent=GSCOCT00024746001 | |
| 34370 chr10 manual_curation CDS 1839459 1839730 . + 0 Parent=GSCOCT00024746001 | |
| 34371 chr10 manual_curation CDS 1839820 1839974 . + 2 Parent=GSCOCT00024746001 | |
| 34372 chr10 manual_curation CDS 1840663 1840925 . + 1 Parent=GSCOCT00024746001 | |
| 34373 chr10 manual_curation CDS 1841193 1841255 . + 0 Parent=GSCOCT00024746001 | |
| 34374 chr10 manual_curation CDS 1841772 1842023 . + 0 Parent=GSCOCT00024746001 | |
| 34375 chr10 manual_curation gene 1842249 1843935 . - . ID=GSCOCG00024747001;Name=Cc10_g02450 | |
| 34376 chr10 manual_curation mRNA 1842249 1843935 . - . ID=GSCOCT00024747001;Parent=GSCOCG00024747001;Name=Cc10_g02450 | |
| 34377 chr10 manual_curation polypeptide 1842317 1843627 . - . ID=GSCOCP00024747001;Dbxref=InterPro:IPR006634,PFAM:PF03798,PROFILE:PS50922,SMART:SM00724,SwissProt:Q0VD42,SwissProt:Q3TYE7,SwissProt:Q6ZRR5,TAIR:AT1G35170.1,TAIR:AT1G35180.1,TAIR:AT1G45010.1,TrEMBL:B9H4F6,TrEMBL:E0CQI4,TrEMBL:I1M885;Derives_from=GSCOCT00024747001;Name=Cc10_g02450;Ontology_term=CC_evidence_code:ISS,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Putative Transmembrane protein 136,CC_functional_completeness:fragment,CC_gene:Tmem136,CC_gene:TMEM136;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024747001~ Putative Transmembrane protein 136~ Tmem136~ fragment;original_location=complement(join(1843607..1843627%2C1843089..1843229%2C1842893..1843012%2C1842582..1842677%2C1842317..1842430));owner=coffea | |
| 34378 chr10 manual_curation exon 1842249 1842430 . - . Parent=GSCOCT00024747001 | |
| 34379 chr10 manual_curation exon 1842582 1842677 . - . Parent=GSCOCT00024747001 | |
| 34380 chr10 manual_curation exon 1842893 1843012 . - . Parent=GSCOCT00024747001 | |
| 34381 chr10 manual_curation exon 1843089 1843229 . - . Parent=GSCOCT00024747001 | |
| 34382 chr10 manual_curation exon 1843607 1843935 . - . Parent=GSCOCT00024747001 | |
| 34383 chr10 manual_curation CDS 1842317 1842430 . - 0 Parent=GSCOCT00024747001 | |
| 34384 chr10 manual_curation CDS 1842582 1842677 . - 0 Parent=GSCOCT00024747001 | |
| 34385 chr10 manual_curation CDS 1842893 1843012 . - 0 Parent=GSCOCT00024747001 | |
| 34386 chr10 manual_curation CDS 1843089 1843229 . - 0 Parent=GSCOCT00024747001 | |
| 34387 chr10 manual_curation CDS 1843607 1843627 . - 0 Parent=GSCOCT00024747001 | |
| 34388 chr10 manual_curation gene 1857626 1858096 . - . ID=GSCOCG00024749001;Name=Cc10_g02460 | |
| 34389 chr10 manual_curation mRNA 1857626 1858096 . - . ID=GSCOCT00024749001;Parent=GSCOCG00024749001;Name=Cc10_g02460 | |
| 34390 chr10 manual_curation polypeptide 1857626 1858096 . - . ID=GSCOCP00024749001;Dbxref=InterPro:IPR004827,InterPro:IPR011616,PFAM:PF00170,PROFILE:PS50217,PROSITE:PS00036,SMART:SM00338,SwissProt:P24068,TAIR:AT1G75390.1,TAIR:AT2G18160.1,TAIR:AT4G34590.1,TrEMBL:B9H4F3,TrEMBL:D9ZIR3,TrEMBL:F6H1J5;Derives_from=GSCOCT00024749001;Name=Cc10_g02460;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0043565,GO:0046983,CC_EC_number:missing_EC_number,PRODUCT:Putative Ocs element-binding factor 1,CC_functional_completeness:complete,CC_gene:OBF1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024749001~ Putative Ocs element-binding factor 1~ OBF1~ complete;original_location=complement(1857626..1858096);owner=coffea | |
| 34391 chr10 manual_curation exon 1857626 1858096 . - . Parent=GSCOCT00024749001 | |
| 34392 chr10 manual_curation CDS 1857626 1858096 . - 0 Parent=GSCOCT00024749001 | |
| 34393 chr10 manual_curation gene 1858299 1858424 . - . ID=GSCOCG00024750001;Name=Cc10_g02470 | |
| 34394 chr10 manual_curation mRNA 1858299 1858424 . - . ID=GSCOCT00024750001;Parent=GSCOCG00024750001;Name=Cc10_g02470 | |
| 34395 chr10 manual_curation polypeptide 1858299 1858424 . - . ID=GSCOCP00024750001;Dbxref=TAIR:AT1G75388.1,TAIR:AT2G18162.1,TrEMBL:B3H5Q6,TrEMBL:F6H1J4,TrEMBL:I1HWW7,TrEMBL:I1M890,TrEMBL:I1NWZ2;Derives_from=GSCOCT00024750001;Name=Cc10_g02470;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:conserved peptide upstream open reading frame 5,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024750001~ conserved peptide upstream open reading frame 5~ unknown_gene~ complete;original_location=complement(1858299..1858424);owner=coffea | |
| 34396 chr10 manual_curation exon 1858299 1858424 . - . Parent=GSCOCT00024750001 | |
| 34397 chr10 manual_curation CDS 1858299 1858424 . - 0 Parent=GSCOCT00024750001 | |
| 34398 chr10 manual_curation gene 1872463 1875944 . + . ID=GSCOCG00024752001;Name=Cc10_g02480 | |
| 34399 chr10 manual_curation mRNA 1872463 1875944 . + . ID=GSCOCT00024752001;Parent=GSCOCG00024752001;Name=Cc10_g02480 | |
| 34400 chr10 manual_curation polypeptide 1872698 1875944 . + . ID=GSCOCP00024752001;Dbxref=InterPro:IPR003480,PFAM:PF02458,SwissProt:Q5H873,SwissProt:Q8GT20,SwissProt:Q94CD1,TAIR:AT1G27620.1,TAIR:AT2G40230.1,TAIR:AT5G41040.1,TrEMBL:A5BF66,TrEMBL:B9GRK3,TrEMBL:B9R7Y9;Derives_from=GSCOCT00024752001;Name=Cc10_g02480;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.3.1.162,PRODUCT:Putative Omega-hydroxypalmitate O-feruloyl transferase,CC_functional_completeness:complete,CC_gene:HHT1,CC_gene:HSR201,CC_gene:HMT/HLT;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024752001~ Putative Omega-hydroxypalmitate O-feruloyl transferase~ HHT1~ complete;original_location=join(1872698..1873126%2C1875003..1875888%2C1875937..1875944);owner=coffea | |
| 34401 chr10 manual_curation exon 1872463 1873126 . + . Parent=GSCOCT00024752001 | |
| 34402 chr10 manual_curation exon 1875003 1875888 . + . Parent=GSCOCT00024752001 | |
| 34403 chr10 manual_curation exon 1875937 1875944 . + . Parent=GSCOCT00024752001 | |
| 34404 chr10 manual_curation CDS 1872698 1873126 . + 0 Parent=GSCOCT00024752001 | |
| 34405 chr10 manual_curation CDS 1875003 1875888 . + 0 Parent=GSCOCT00024752001 | |
| 34406 chr10 manual_curation CDS 1875937 1875944 . + 1 Parent=GSCOCT00024752001 | |
| 34407 chr10 manual_curation gene 1884539 1889696 . + . ID=GSCOCG00024753001;Name=Cc10_g02490 | |
| 34408 chr10 manual_curation mRNA 1884539 1889696 . + . ID=GSCOCT00024753001;Parent=GSCOCG00024753001;Name=Cc10_g02490 | |
| 34409 chr10 manual_curation polypeptide 1885714 1889417 . + . ID=GSCOCP00024753001;Dbxref=GENE3D:G3DSA:1.10.472.10,InterPro:IPR004367,InterPro:IPR006670,InterPro:IPR006671,InterPro:IPR011028,InterPro:IPR013763,InterPro:IPR015429,PANTHER:PTHR10026,PFAM:PF00134,PFAM:PF02984,SMART:SM00385,SUPERFAMILY:SSF47954,SwissProt:Q2QQS5,SwissProt:Q2RAC5,SwissProt:Q9FKE6,TAIR:AT1G27630.1,TAIR:AT4G19600.1,TAIR:AT5G45190.2,TrEMBL:B9GRK4,TrEMBL:B9R7Y8,TrEMBL:F6H1I9;Derives_from=GSCOCT00024753001;Name=Cc10_g02490;Ontology_term=CC_evidence_code:ISS,GO:0005634,CC_EC_number:missing_EC_number,PRODUCT:Putative Cyclin-T1-3,CC_functional_completeness:complete,CC_gene:CYCT1-3,CC_gene:CYCT1-1,CC_gene:CYCT1-5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024753001~ Putative Cyclin-T1-3~ CYCT1-3~ complete;original_location=join(1885714..1885943%2C1886669..1886750%2C1887844..1887978%2C1888069..1888244%2C1888339..1888490%2C1888843..1889417);owner=coffea | |
| 34410 chr10 manual_curation exon 1884539 1885943 . + . Parent=GSCOCT00024753001 | |
| 34411 chr10 manual_curation exon 1886669 1886750 . + . Parent=GSCOCT00024753001 | |
| 34412 chr10 manual_curation exon 1887844 1887978 . + . Parent=GSCOCT00024753001 | |
| 34413 chr10 manual_curation exon 1888069 1888244 . + . Parent=GSCOCT00024753001 | |
| 34414 chr10 manual_curation exon 1888339 1888490 . + . Parent=GSCOCT00024753001 | |
| 34415 chr10 manual_curation exon 1888843 1889696 . + . Parent=GSCOCT00024753001 | |
| 34416 chr10 manual_curation CDS 1885714 1885943 . + 0 Parent=GSCOCT00024753001 | |
| 34417 chr10 manual_curation CDS 1886669 1886750 . + 2 Parent=GSCOCT00024753001 | |
| 34418 chr10 manual_curation CDS 1887844 1887978 . + 0 Parent=GSCOCT00024753001 | |
| 34419 chr10 manual_curation CDS 1888069 1888244 . + 0 Parent=GSCOCT00024753001 | |
| 34420 chr10 manual_curation CDS 1888339 1888490 . + 2 Parent=GSCOCT00024753001 | |
| 34421 chr10 manual_curation CDS 1888843 1889417 . + 1 Parent=GSCOCT00024753001 | |
| 34422 chr10 manual_curation gene 1904275 1909516 . + . ID=GSCOCG00024754001;Name=Cc10_g02500 | |
| 34423 chr10 manual_curation mRNA 1904275 1909516 . + . ID=GSCOCT00024754001;Parent=GSCOCG00024754001;Name=Cc10_g02500 | |
| 34424 chr10 manual_curation polypeptide 1904513 1909166 . + . ID=GSCOCP00024754001;Dbxref=InterPro:IPR001092,InterPro:IPR011598,PROFILE:PS50888,SUPERFAMILY:SSF47459,SwissProt:Q8GXT3,SwissProt:Q94JL3,SwissProt:Q9SFZ3,TAIR:AT1G27660.1,TAIR:AT1G61660.1,TAIR:AT3G20640.1,TrEMBL:A5C1E1,TrEMBL:B9R7Y7,TrEMBL:E0CQH4;Derives_from=GSCOCT00024754001;Name=Cc10_g02500;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0030528,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative Transcription factor bHLH110,CC_functional_completeness:complete,CC_gene:BHLH110,CC_gene:BHLH123,CC_gene:BHLH112;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024754001~ Putative Transcription factor bHLH110~ BHLH110~ complete;original_location=join(1904513..1904679%2C1905146..1905842%2C1906522..1906647%2C1907266..1907331%2C1907835..1907900%2C1908715..1908774%2C1909023..1909166);owner=coffea | |
| 34425 chr10 manual_curation exon 1904275 1904679 . + . Parent=GSCOCT00024754001 | |
| 34426 chr10 manual_curation exon 1905146 1905842 . + . Parent=GSCOCT00024754001 | |
| 34427 chr10 manual_curation exon 1906522 1906647 . + . Parent=GSCOCT00024754001 | |
| 34428 chr10 manual_curation exon 1907266 1907331 . + . Parent=GSCOCT00024754001 | |
| 34429 chr10 manual_curation exon 1907835 1907900 . + . Parent=GSCOCT00024754001 | |
| 34430 chr10 manual_curation exon 1908715 1908774 . + . Parent=GSCOCT00024754001 | |
| 34431 chr10 manual_curation exon 1909023 1909516 . + . Parent=GSCOCT00024754001 | |
| 34432 chr10 manual_curation CDS 1904513 1904679 . + 0 Parent=GSCOCT00024754001 | |
| 34433 chr10 manual_curation CDS 1905146 1905842 . + 2 Parent=GSCOCT00024754001 | |
| 34434 chr10 manual_curation CDS 1906522 1906647 . + 0 Parent=GSCOCT00024754001 | |
| 34435 chr10 manual_curation CDS 1907266 1907331 . + 0 Parent=GSCOCT00024754001 | |
| 34436 chr10 manual_curation CDS 1907835 1907900 . + 0 Parent=GSCOCT00024754001 | |
| 34437 chr10 manual_curation CDS 1908715 1908774 . + 0 Parent=GSCOCT00024754001 | |
| 34438 chr10 manual_curation CDS 1909023 1909166 . + 0 Parent=GSCOCT00024754001 | |
| 34439 chr10 manual_curation gene 1912987 1918756 . + . ID=GSCOCG00024755001;Name=Cc10_g02510 | |
| 34440 chr10 manual_curation mRNA 1912987 1918756 . + . ID=GSCOCT00024755001;Parent=GSCOCG00024755001;Name=Cc10_g02510 | |
| 34441 chr10 manual_curation polypeptide 1914281 1918254 . + . ID=GSCOCP00024755001;Dbxref=InterPro:IPR003729,PFAM:PF02577,SUPERFAMILY:SSF103256,TAIR:AT1G19660.1,TAIR:AT1G75380.1,TAIR:AT5G66050.1,TrEMBL:B9GRK6,TrEMBL:B9R7Y6,TrEMBL:E0CQH3;Derives_from=GSCOCT00024755001;Name=Cc10_g02510;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Wound-responsive family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024755001~ Wound-responsive family protein~ unknown_gene~ complete;original_location=join(1914281..1914566%2C1915410..1915580%2C1915700..1915749%2C1915843..1915899%2C1916007..1916072%2C1916174..1916248%2C1916763..1916881%2C1917530..1917621%2C1918202..1918254);owner=coffea | |
| 34442 chr10 manual_curation exon 1912987 1913073 . + . Parent=GSCOCT00024755001 | |
| 34443 chr10 manual_curation exon 1913335 1913483 . + . Parent=GSCOCT00024755001 | |
| 34444 chr10 manual_curation exon 1918379 1918756 . + . Parent=GSCOCT00024755001 | |
| 34445 chr10 manual_curation exon 1914273 1914566 . + . Parent=GSCOCT00024755001 | |
| 34446 chr10 manual_curation exon 1915410 1915580 . + . Parent=GSCOCT00024755001 | |
| 34447 chr10 manual_curation exon 1915700 1915749 . + . Parent=GSCOCT00024755001 | |
| 34448 chr10 manual_curation exon 1915843 1915899 . + . Parent=GSCOCT00024755001 | |
| 34449 chr10 manual_curation exon 1916007 1916072 . + . Parent=GSCOCT00024755001 | |
| 34450 chr10 manual_curation exon 1916174 1916248 . + . Parent=GSCOCT00024755001 | |
| 34451 chr10 manual_curation exon 1916763 1916881 . + . Parent=GSCOCT00024755001 | |
| 34452 chr10 manual_curation exon 1917530 1917621 . + . Parent=GSCOCT00024755001 | |
| 34453 chr10 manual_curation exon 1918202 1918256 . + . Parent=GSCOCT00024755001 | |
| 34454 chr10 manual_curation CDS 1914281 1914566 . + 0 Parent=GSCOCT00024755001 | |
| 34455 chr10 manual_curation CDS 1915410 1915580 . + 1 Parent=GSCOCT00024755001 | |
| 34456 chr10 manual_curation CDS 1915700 1915749 . + 1 Parent=GSCOCT00024755001 | |
| 34457 chr10 manual_curation CDS 1915843 1915899 . + 0 Parent=GSCOCT00024755001 | |
| 34458 chr10 manual_curation CDS 1916007 1916072 . + 0 Parent=GSCOCT00024755001 | |
| 34459 chr10 manual_curation CDS 1916174 1916248 . + 0 Parent=GSCOCT00024755001 | |
| 34460 chr10 manual_curation CDS 1916763 1916881 . + 0 Parent=GSCOCT00024755001 | |
| 34461 chr10 manual_curation CDS 1917530 1917621 . + 2 Parent=GSCOCT00024755001 | |
| 34462 chr10 manual_curation CDS 1918202 1918254 . + 1 Parent=GSCOCT00024755001 | |
| 34463 chr10 manual_curation gene 1924970 1926825 . + . ID=GSCOCG00024756001;Name=Cc10_g02520 | |
| 34464 chr10 manual_curation mRNA 1924970 1926825 . + . ID=GSCOCT00024756001;Parent=GSCOCG00024756001;Name=Cc10_g02520 | |
| 34465 chr10 manual_curation polypeptide 1924970 1926825 . + . ID=GSCOCP00024756001;Dbxref=GENE3D:G3DSA:3.40.525.10,InterPro:IPR001251,InterPro:IPR008273,InterPro:IPR011074,PFAM:PF00650,PFAM:PF03765,PROFILE:PS50191,SMART:SM00516,SUPERFAMILY:SSF46938,SUPERFAMILY:SSF52087,SwissProt:P24280,SwissProt:P24859,SwissProt:Q10137,TAIR:AT2G21540.1,TAIR:AT4G36490.1,TAIR:AT4G39170.1,TrEMBL:B0BLI9,TrEMBL:B9RH84,TrEMBL:D7U4L4;Derives_from=GSCOCT00024756001;Name=Cc10_g02520;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Sec14 cytosolic factor,CC_functional_completeness:modules,CC_gene:sec14,CC_gene:SEC14;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024756001~ Putative Sec14 cytosolic factor~ sec14~ modules;original_location=join(1924970..1925148%2C1925301..1925400%2C1925763..1926029%2C1926129..1926206%2C1926313..1926414%2C1926496..1926545%2C1926627..1926825);owner=coffea | |
| 34466 chr10 manual_curation exon 1924970 1925148 . + . Parent=GSCOCT00024756001 | |
| 34467 chr10 manual_curation exon 1925301 1925400 . + . Parent=GSCOCT00024756001 | |
| 34468 chr10 manual_curation exon 1925763 1926029 . + . Parent=GSCOCT00024756001 | |
| 34469 chr10 manual_curation exon 1926129 1926206 . + . Parent=GSCOCT00024756001 | |
| 34470 chr10 manual_curation exon 1926313 1926414 . + . Parent=GSCOCT00024756001 | |
| 34471 chr10 manual_curation exon 1926496 1926545 . + . Parent=GSCOCT00024756001 | |
| 34472 chr10 manual_curation exon 1926627 1926825 . + . Parent=GSCOCT00024756001 | |
| 34473 chr10 manual_curation CDS 1924970 1925148 . + 0 Parent=GSCOCT00024756001 | |
| 34474 chr10 manual_curation CDS 1925301 1925400 . + 2 Parent=GSCOCT00024756001 | |
| 34475 chr10 manual_curation CDS 1925763 1926029 . + 0 Parent=GSCOCT00024756001 | |
| 34476 chr10 manual_curation CDS 1926129 1926206 . + 0 Parent=GSCOCT00024756001 | |
| 34477 chr10 manual_curation CDS 1926313 1926414 . + 0 Parent=GSCOCT00024756001 | |
| 34478 chr10 manual_curation CDS 1926496 1926545 . + 0 Parent=GSCOCT00024756001 | |
| 34479 chr10 manual_curation CDS 1926627 1926825 . + 2 Parent=GSCOCT00024756001 | |
| 34480 chr10 manual_curation gene 1929197 1934638 . + . ID=GSCOCG00024757001;Name=Cc10_g02530 | |
| 34481 chr10 manual_curation mRNA 1929197 1934638 . + . ID=GSCOCT00024757001;Parent=GSCOCG00024757001;Name=Cc10_g02530 | |
| 34482 chr10 manual_curation polypeptide 1930489 1934006 . + . ID=GSCOCP00024757001;Dbxref=GENE3D:G3DSA:3.30.572.10,InterPro:IPR000398,InterPro:IPR001796,InterPro:IPR012262,InterPro:IPR017925,InterPro:IPR020940,PANTHER:PTHR11549:SF2,PFAM:PF00186,PFAM:PF00303,PIR:PIRSF000389,PRINTS:PR00108,PROFILE:PS51330,PROSITE:PS00075,PROSITE:PS00091,SUPERFAMILY:SSF55831,SwissProt:O81395,SwissProt:P45350,SwissProt:P51820,TAIR:AT2G16370.1,TAIR:AT2G21550.1,TAIR:AT4G34570.1,TIGRFAMs:TIGR03284,TrEMBL:B9H0T4,TrEMBL:B9RH79,TrEMBL:F6I0M2;Derives_from=GSCOCT00024757001;Name=Cc10_g02530;Ontology_term=CC_evidence_code:ISS,GO:0004146,GO:0004799,GO:0006231,GO:0006545,GO:0006730,GO:0009165,GO:0055114,CC_EC_number:2.1.1.45,CC_EC_number:2.1.1.45,PRODUCT:Bifunctional dihydrofolate reductase-thymidylate synthase,CC_functional_completeness:complete,CC_gene:DRTS;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024757001~ Bifunctional dihydrofolate reductase-thymidylate synthase~ DRTS~ complete;original_location=join(1930489..1930916%2C1930995..1931394%2C1931509..1931553%2C1931996..1932061%2C1932555..1932616%2C1932694..1932768%2C1932848..1933013%2C1933111..1933234%2C1933407..1933513%2C1933896..1934006);owner=coffea | |
| 34483 chr10 manual_curation exon 1929197 1930916 . + . Parent=GSCOCT00024757001 | |
| 34484 chr10 manual_curation exon 1930995 1931394 . + . Parent=GSCOCT00024757001 | |
| 34485 chr10 manual_curation exon 1931509 1931553 . + . Parent=GSCOCT00024757001 | |
| 34486 chr10 manual_curation exon 1931996 1932061 . + . Parent=GSCOCT00024757001 | |
| 34487 chr10 manual_curation exon 1932555 1932616 . + . Parent=GSCOCT00024757001 | |
| 34488 chr10 manual_curation exon 1932694 1932768 . + . Parent=GSCOCT00024757001 | |
| 34489 chr10 manual_curation exon 1932848 1933013 . + . Parent=GSCOCT00024757001 | |
| 34490 chr10 manual_curation exon 1933111 1933234 . + . Parent=GSCOCT00024757001 | |
| 34491 chr10 manual_curation exon 1933407 1933513 . + . Parent=GSCOCT00024757001 | |
| 34492 chr10 manual_curation exon 1933896 1934638 . + . Parent=GSCOCT00024757001 | |
| 34493 chr10 manual_curation CDS 1930489 1930916 . + 0 Parent=GSCOCT00024757001 | |
| 34494 chr10 manual_curation CDS 1930995 1931394 . + 2 Parent=GSCOCT00024757001 | |
| 34495 chr10 manual_curation CDS 1931509 1931553 . + 0 Parent=GSCOCT00024757001 | |
| 34496 chr10 manual_curation CDS 1931996 1932061 . + 0 Parent=GSCOCT00024757001 | |
| 34497 chr10 manual_curation CDS 1932555 1932616 . + 0 Parent=GSCOCT00024757001 | |
| 34498 chr10 manual_curation CDS 1932694 1932768 . + 2 Parent=GSCOCT00024757001 | |
| 34499 chr10 manual_curation CDS 1932848 1933013 . + 2 Parent=GSCOCT00024757001 | |
| 34500 chr10 manual_curation CDS 1933111 1933234 . + 0 Parent=GSCOCT00024757001 | |
| 34501 chr10 manual_curation CDS 1933407 1933513 . + 1 Parent=GSCOCT00024757001 | |
| 34502 chr10 manual_curation CDS 1933896 1934006 . + 0 Parent=GSCOCT00024757001 | |
| 34503 chr10 manual_curation gene 1935395 1935670 . - . ID=GSCOCG00024758001;Name=Cc10_g02540 | |
| 34504 chr10 manual_curation mRNA 1935395 1935670 . - . ID=GSCOCT00024758001;Parent=GSCOCG00024758001;Name=Cc10_g02540 | |
| 34505 chr10 manual_curation polypeptide 1935395 1935670 . - . ID=GSCOCP00024758001;Dbxref=InterPro:IPR006121,PFAM:PF00403,TrEMBL:B9GRK9,TrEMBL:B9H4E3,TrEMBL:F6H1I7;Derives_from=GSCOCT00024758001;Name=Cc10_g02540;Ontology_term=CC_evidence_code:ISS,GO:0030001,GO:0046872,CC_EC_number:missing_EC_number,PRODUCT:Predicted protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024758001~ Predicted protein~ unknown_gene~ fragment;original_location=complement(1935395..1935670);owner=coffea | |
| 34506 chr10 manual_curation exon 1935395 1935670 . - . Parent=GSCOCT00024758001 | |
| 34507 chr10 manual_curation CDS 1935395 1935670 . - 0 Parent=GSCOCT00024758001 | |
| 34508 chr10 manual_curation gene 1937536 1942507 . - . ID=GSCOCG00024759001;Name=Cc10_g02550 | |
| 34509 chr10 manual_curation mRNA 1937536 1942507 . - . ID=GSCOCT00024759001;Parent=GSCOCG00024759001;Name=Cc10_g02550 | |
| 34510 chr10 manual_curation polypeptide 1938703 1942214 . - . ID=GSCOCP00024759001;Dbxref=InterPro:IPR009286,InterPro:IPR018009,PANTHER:PTHR14456,PFAM:PF06090,SwissProt:Q4JL91,SwissProt:Q5PXE9,SwissProt:Q93YN9,TAIR:AT1G22100.1,TAIR:AT1G58643.1,TAIR:AT5G42810.1,TrEMBL:A5AZ37,TrEMBL:B9R7Y2,TrEMBL:F6H1I6;Derives_from=GSCOCT00024759001;Name=Cc10_g02550;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0035299,CC_EC_number:missing_EC_number,PRODUCT:Inositol-pentakisphosphate 2-kinase,CC_functional_completeness:complete,CC_gene:IPK1,CC_gene:ippk,CC_gene:Ippk;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024759001~ Inositol-pentakisphosphate 2-kinase~ IPK1~ complete;original_location=complement(join(1942113..1942214%2C1941389..1941592%2C1941032..1941179%2C1940352..1940392%2C1940150..1940260%2C1939351..1939950%2C1938703..1938873));owner=coffea | |
| 34511 chr10 manual_curation exon 1942355 1942507 . - . Parent=GSCOCT00024759001 | |
| 34512 chr10 manual_curation exon 1937536 1938873 . - . Parent=GSCOCT00024759001 | |
| 34513 chr10 manual_curation exon 1939351 1939950 . - . Parent=GSCOCT00024759001 | |
| 34514 chr10 manual_curation exon 1940150 1940260 . - . Parent=GSCOCT00024759001 | |
| 34515 chr10 manual_curation exon 1940352 1940392 . - . Parent=GSCOCT00024759001 | |
| 34516 chr10 manual_curation exon 1941032 1941179 . - . Parent=GSCOCT00024759001 | |
| 34517 chr10 manual_curation exon 1941389 1941592 . - . Parent=GSCOCT00024759001 | |
| 34518 chr10 manual_curation exon 1942113 1942225 . - . Parent=GSCOCT00024759001 | |
| 34519 chr10 manual_curation CDS 1938703 1938873 . - 0 Parent=GSCOCT00024759001 | |
| 34520 chr10 manual_curation CDS 1939351 1939950 . - 0 Parent=GSCOCT00024759001 | |
| 34521 chr10 manual_curation CDS 1940150 1940260 . - 0 Parent=GSCOCT00024759001 | |
| 34522 chr10 manual_curation CDS 1940352 1940392 . - 1 Parent=GSCOCT00024759001 | |
| 34523 chr10 manual_curation CDS 1941032 1941179 . - 0 Parent=GSCOCT00024759001 | |
| 34524 chr10 manual_curation CDS 1941389 1941592 . - 0 Parent=GSCOCT00024759001 | |
| 34525 chr10 manual_curation CDS 1942113 1942214 . - 0 Parent=GSCOCT00024759001 | |
| 34526 chr10 manual_curation gene 1947559 1951379 . + . ID=GSCOCG00024760001;Name=Cc10_g02560 | |
| 34527 chr10 manual_curation mRNA 1947559 1951379 . + . ID=GSCOCT00024760001;Parent=GSCOCG00024760001;Name=Cc10_g02560 | |
| 34528 chr10 manual_curation polypeptide 1947654 1950969 . + . ID=GSCOCP00024760001;Dbxref=InterPro:IPR005299,PFAM:PF03492,SwissProt:Q9AR07,SwissProt:Q9SBK6,SwissProt:Q9SPV4,TAIR:AT1G19640.1,TAIR:AT4G36470.1,TAIR:AT5G66430.1,TrEMBL:B9R7Y1,TrEMBL:E0CQG7,TrEMBL:I1MXY0;Derives_from=GSCOCT00024760001;Name=Cc10_g02560;Ontology_term=CC_evidence_code:ISS,GO:0008168,CC_EC_number:2.1.1.141,PRODUCT:Jasmonate O-methyltransferase,CC_functional_completeness:complete,CC_gene:JMT,CC_gene:SAMT;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024760001~ Jasmonate O-methyltransferase~ JMT~ complete;original_location=join(1947654..1947728%2C1948098..1948505%2C1949988..1950260%2C1950589..1950969);owner=coffea | |
| 34529 chr10 manual_curation exon 1947559 1947728 . + . Parent=GSCOCT00024760001 | |
| 34530 chr10 manual_curation exon 1948098 1948505 . + . Parent=GSCOCT00024760001 | |
| 34531 chr10 manual_curation exon 1949988 1950260 . + . Parent=GSCOCT00024760001 | |
| 34532 chr10 manual_curation exon 1950589 1951379 . + . Parent=GSCOCT00024760001 | |
| 34533 chr10 manual_curation CDS 1947654 1947728 . + 0 Parent=GSCOCT00024760001 | |
| 34534 chr10 manual_curation CDS 1948098 1948505 . + 0 Parent=GSCOCT00024760001 | |
| 34535 chr10 manual_curation CDS 1949988 1950260 . + 0 Parent=GSCOCT00024760001 | |
| 34536 chr10 manual_curation CDS 1950589 1950969 . + 0 Parent=GSCOCT00024760001 | |
| 34537 chr10 manual_curation gene 1960654 1961806 . - . ID=GSCOCG00024761001;Name=Cc10_g02570 | |
| 34538 chr10 manual_curation mRNA 1960654 1961806 . - . ID=GSCOCT00024761001;Parent=GSCOCG00024761001;Name=Cc10_g02570 | |
| 34539 chr10 manual_curation polypeptide 1960654 1961424 . - . ID=GSCOCP00024761001;Dbxref=TAIR:AT5G66440.1,TrEMBL:A5AHT0,TrEMBL:B9MXM0,TrEMBL:F6H063;Derives_from=GSCOCT00024761001;Name=Cc10_g02570;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024761001~ Putative unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34560.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(1960654..1961424);owner=coffea | |
| 34540 chr10 manual_curation exon 1960654 1961806 . - . Parent=GSCOCT00024761001 | |
| 34541 chr10 manual_curation CDS 1960654 1961424 . - 0 Parent=GSCOCT00024761001 | |
| 34542 chr10 manual_curation gene 1970716 1974673 . - . ID=GSCOCG00024763001;Name=Cc10_g02580 | |
| 34543 chr10 manual_curation mRNA 1970716 1974673 . - . ID=GSCOCT00024763001;Parent=GSCOCG00024763001;Name=Cc10_g02580 | |
| 34544 chr10 manual_curation polypeptide 1970783 1973668 . - . ID=GSCOCP00024763001;Dbxref=TAIR:AT1G30475.1,TAIR:AT1G56200.1,TrEMBL:B9N5P9,TrEMBL:D7UAM4,TrEMBL:I1N081;Derives_from=GSCOCT00024763001;Name=Cc10_g02580;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Predicted protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024763001~ Predicted protein~ unknown_gene~ complete;original_location=complement(join(1973620..1973668%2C1971895..1972055%2C1971246..1971321%2C1970783..1970979));owner=coffea | |
| 34545 chr10 manual_curation exon 1970716 1970979 . - . Parent=GSCOCT00024763001 | |
| 34546 chr10 manual_curation exon 1971246 1971321 . - . Parent=GSCOCT00024763001 | |
| 34547 chr10 manual_curation exon 1971895 1972055 . - . Parent=GSCOCT00024763001 | |
| 34548 chr10 manual_curation exon 1973620 1974673 . - . Parent=GSCOCT00024763001 | |
| 34549 chr10 manual_curation CDS 1970783 1970979 . - 1 Parent=GSCOCT00024763001 | |
| 34550 chr10 manual_curation CDS 1971246 1971321 . - 0 Parent=GSCOCT00024763001 | |
| 34551 chr10 manual_curation CDS 1971895 1972055 . - 1 Parent=GSCOCT00024763001 | |
| 34552 chr10 manual_curation CDS 1973620 1973668 . - 0 Parent=GSCOCT00024763001 | |
| 34553 chr10 manual_curation gene 1979053 1984041 . + . ID=GSCOCG00024764001;Name=Cc10_g02590 | |
| 34554 chr10 manual_curation mRNA 1979053 1984041 . + . ID=GSCOCT00024764001;Parent=GSCOCG00024764001;Name=Cc10_g02590 | |
| 34555 chr10 manual_curation polypeptide 1979716 1983779 . + . ID=GSCOCP00024764001;Dbxref=InterPro:IPR005835,InterPro:IPR005836,InterPro:IPR011831,PFAM:PF00483,PROSITE:PS00808,PROSITE:PS00809,PROSITE:PS00810,SwissProt:P55230,SwissProt:P55233,SwissProt:P55242,TAIR:AT1G27680.1,TAIR:AT2G21590.1,TAIR:AT4G39210.1,TIGRFAMs:TIGR02091,TrEMBL:A3KCF8,TrEMBL:B9GRL4,TrEMBL:E0CQG1;Derives_from=GSCOCT00024764001;Name=Cc10_g02590;Ontology_term=CC_evidence_code:ISS,GO:0005978,GO:0008878,GO:0009058,GO:0016779,CC_EC_number:2.7.7.27,CC_EC_number:2.7.7.27,PRODUCT:Glucose-1-phosphate adenylyltransferase large subunit%2C chloroplastic/amyloplastic,CC_functional_completeness:complete,CC_gene:AGPS1,CC_gene:AGPS2,CC_gene:APL2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024764001~ Glucose-1-phosphate adenylyltransferase large subunit%2C chloroplastic/amyloplastic~ AGPS1~ complete;original_location=join(1979716..1979952%2C1980096..1980221%2C1980493..1980666%2C1980926..1981018%2C1981099..1981182%2C1981267..1981322%2C1981470..1981563%2C1981709..1981894%2C1982020..1982100%2C1982612..1982698%2C1982772..1982876%2C1983199..1983305%2C1983519..1983579%2C1983678..1983779);owner=coffea | |
| 34556 chr10 manual_curation exon 1979053 1979952 . + . Parent=GSCOCT00024764001 | |
| 34557 chr10 manual_curation exon 1980096 1980221 . + . Parent=GSCOCT00024764001 | |
| 34558 chr10 manual_curation exon 1980493 1980666 . + . Parent=GSCOCT00024764001 | |
| 34559 chr10 manual_curation exon 1980926 1981018 . + . Parent=GSCOCT00024764001 | |
| 34560 chr10 manual_curation exon 1981099 1981182 . + . Parent=GSCOCT00024764001 | |
| 34561 chr10 manual_curation exon 1981267 1981322 . + . Parent=GSCOCT00024764001 | |
| 34562 chr10 manual_curation exon 1981470 1981563 . + . Parent=GSCOCT00024764001 | |
| 34563 chr10 manual_curation exon 1981709 1981894 . + . Parent=GSCOCT00024764001 | |
| 34564 chr10 manual_curation exon 1982020 1982100 . + . Parent=GSCOCT00024764001 | |
| 34565 chr10 manual_curation exon 1982612 1982698 . + . Parent=GSCOCT00024764001 | |
| 34566 chr10 manual_curation exon 1982772 1982876 . + . Parent=GSCOCT00024764001 | |
| 34567 chr10 manual_curation exon 1983199 1983305 . + . Parent=GSCOCT00024764001 | |
| 34568 chr10 manual_curation exon 1983519 1983579 . + . Parent=GSCOCT00024764001 | |
| 34569 chr10 manual_curation exon 1983678 1984041 . + . Parent=GSCOCT00024764001 | |
| 34570 chr10 manual_curation CDS 1979716 1979952 . + 0 Parent=GSCOCT00024764001 | |
| 34571 chr10 manual_curation CDS 1980096 1980221 . + 0 Parent=GSCOCT00024764001 | |
| 34572 chr10 manual_curation CDS 1980493 1980666 . + 0 Parent=GSCOCT00024764001 | |
| 34573 chr10 manual_curation CDS 1980926 1981018 . + 0 Parent=GSCOCT00024764001 | |
| 34574 chr10 manual_curation CDS 1981099 1981182 . + 0 Parent=GSCOCT00024764001 | |
| 34575 chr10 manual_curation CDS 1981267 1981322 . + 0 Parent=GSCOCT00024764001 | |
| 34576 chr10 manual_curation CDS 1981470 1981563 . + 2 Parent=GSCOCT00024764001 | |
| 34577 chr10 manual_curation CDS 1981709 1981894 . + 0 Parent=GSCOCT00024764001 | |
| 34578 chr10 manual_curation CDS 1982020 1982100 . + 0 Parent=GSCOCT00024764001 | |
| 34579 chr10 manual_curation CDS 1982612 1982698 . + 0 Parent=GSCOCT00024764001 | |
| 34580 chr10 manual_curation CDS 1982772 1982876 . + 0 Parent=GSCOCT00024764001 | |
| 34581 chr10 manual_curation CDS 1983199 1983305 . + 0 Parent=GSCOCT00024764001 | |
| 34582 chr10 manual_curation CDS 1983519 1983579 . + 2 Parent=GSCOCT00024764001 | |
| 34583 chr10 manual_curation CDS 1983678 1983779 . + 0 Parent=GSCOCT00024764001 | |
| 34584 chr10 manual_curation gene 1984220 1987040 . - . ID=GSCOCG00024765001;Name=Cc10_g02600 | |
| 34585 chr10 manual_curation mRNA 1984220 1987040 . - . ID=GSCOCT00024765001;Parent=GSCOCG00024765001;Name=Cc10_g02600 | |
| 34586 chr10 manual_curation polypeptide 1984220 1987040 . - . ID=GSCOCP00024765001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR001547,InterPro:IPR013781,InterPro:IPR017853,PFAM:PF00150,SUPERFAMILY:SSF51445,SwissProt:Q0JKM9,SwissProt:Q6YM50,SwissProt:Q9FJZ3,TAIR:AT3G10890.1,TAIR:AT5G01930.1,TAIR:AT5G66460.1,TrEMBL:C7A7Y0,TrEMBL:D7SPA5,TrEMBL:E0CQG0;Derives_from=GSCOCT00024765001;Name=Cc10_g02600;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0043169,CC_EC_number:missing_EC_number,PRODUCT:Mannan endo-1%2C4-beta-mannosidase 1,CC_functional_completeness:complete,CC_gene:MAN1,CC_gene:MAN7,CC_gene:MAN5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024765001~ Mannan endo-1%2C4-beta-mannosidase 1~ MAN1~ complete;original_location=complement(join(1986711..1987040%2C1986396..1986590%2C1986039..1986161%2C1984752..1984954%2C1984220..1984649));owner=coffea | |
| 34587 chr10 manual_curation exon 1984220 1984649 . - . Parent=GSCOCT00024765001 | |
| 34588 chr10 manual_curation exon 1984752 1984954 . - . Parent=GSCOCT00024765001 | |
| 34589 chr10 manual_curation exon 1986039 1986161 . - . Parent=GSCOCT00024765001 | |
| 34590 chr10 manual_curation exon 1986396 1986590 . - . Parent=GSCOCT00024765001 | |
| 34591 chr10 manual_curation exon 1986711 1987040 . - . Parent=GSCOCT00024765001 | |
| 34592 chr10 manual_curation CDS 1984220 1984649 . - 2 Parent=GSCOCT00024765001 | |
| 34593 chr10 manual_curation CDS 1984752 1984954 . - 0 Parent=GSCOCT00024765001 | |
| 34594 chr10 manual_curation CDS 1986039 1986161 . - 0 Parent=GSCOCT00024765001 | |
| 34595 chr10 manual_curation CDS 1986396 1986590 . - 0 Parent=GSCOCT00024765001 | |
| 34596 chr10 manual_curation CDS 1986711 1987040 . - 0 Parent=GSCOCT00024765001 | |
| 34597 chr10 manual_curation gene 1988925 1996090 . - . ID=GSCOCG00024766001;Name=Cc10_g02610 | |
| 34598 chr10 manual_curation mRNA 1988925 1996090 . - . ID=GSCOCT00024766001;Parent=GSCOCG00024766001;Name=Cc10_g02610 | |
| 34599 chr10 manual_curation polypeptide 1989217 1995922 . - . ID=GSCOCP00024766001;Dbxref=GENE3D:G3DSA:1.10.287.110,InterPro:IPR001623,PFAM:PF00226,PROFILE:PS50076,SUPERFAMILY:SSF46565,SwissProt:O13773,SwissProt:Q0WQ57,SwissProt:Q9SU08,TAIR:AT1G75310.1,TAIR:AT4G12770.1,TAIR:AT4G36520.1,TrEMBL:D7SPB0,TrEMBL:E0CQF3,TrEMBL:I1J625;Derives_from=GSCOCT00024766001;Name=Cc10_g02610;Ontology_term=CC_evidence_code:ISS,GO:0031072,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:At4g12770,CC_gene:At4g12780,CC_gene:ucp7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024766001~ Hypothetical protein~ At4g12770~ missing_functional_completeness;original_location=complement(join(1995492..1995922%2C1990628..1994309%2C1990450..1990539%2C1990292..1990357%2C1990116..1990205%2C1989521..1989697%2C1989217..1989252));owner=coffea | |
| 34600 chr10 manual_curation exon 1988925 1989252 . - . Parent=GSCOCT00024766001 | |
| 34601 chr10 manual_curation exon 1989521 1989697 . - . Parent=GSCOCT00024766001 | |
| 34602 chr10 manual_curation exon 1990116 1990205 . - . Parent=GSCOCT00024766001 | |
| 34603 chr10 manual_curation exon 1990292 1990357 . - . Parent=GSCOCT00024766001 | |
| 34604 chr10 manual_curation exon 1990450 1990539 . - . Parent=GSCOCT00024766001 | |
| 34605 chr10 manual_curation exon 1990628 1994309 . - . Parent=GSCOCT00024766001 | |
| 34606 chr10 manual_curation exon 1995492 1996090 . - . Parent=GSCOCT00024766001 | |
| 34607 chr10 manual_curation CDS 1989217 1989252 . - 0 Parent=GSCOCT00024766001 | |
| 34608 chr10 manual_curation CDS 1989521 1989697 . - 0 Parent=GSCOCT00024766001 | |
| 34609 chr10 manual_curation CDS 1990116 1990205 . - 0 Parent=GSCOCT00024766001 | |
| 34610 chr10 manual_curation CDS 1990292 1990357 . - 0 Parent=GSCOCT00024766001 | |
| 34611 chr10 manual_curation CDS 1990450 1990539 . - 0 Parent=GSCOCT00024766001 | |
| 34612 chr10 manual_curation CDS 1990628 1994309 . - 2 Parent=GSCOCT00024766001 | |
| 34613 chr10 manual_curation CDS 1995492 1995922 . - 0 Parent=GSCOCT00024766001 | |
| 34614 chr10 manual_curation gene 2005431 2009860 . + . ID=GSCOCG00024767001;Name=Cc10_g02620 | |
| 34615 chr10 manual_curation mRNA 2005431 2009860 . + . ID=GSCOCT00024767001;Parent=GSCOCG00024767001;Name=Cc10_g02620 | |
| 34616 chr10 manual_curation polypeptide 2005959 2008662 . + . ID=GSCOCP00024767001;Dbxref=InterPro:IPR001353,PFAM:PF00227,SwissProt:O23712,SwissProt:P34066,SwissProt:P52428,TAIR:AT1G47250.1,TAIR:AT1G79210.1,TAIR:AT5G42790.1,TrEMBL:A5C3G9,TrEMBL:F6H059,TrEMBL:Q8H1Y2;Derives_from=GSCOCT00024767001;Name=Cc10_g02620;Ontology_term=CC_evidence_code:ISS,GO:0004298,GO:0005839,GO:0051603,CC_EC_number:3.4.25.1,PRODUCT:Proteasome subunit alpha type-1-B,CC_functional_completeness:fragment,CC_gene:PAF2,CC_gene:PAF1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024767001~ Proteasome subunit alpha type-1-B~ PAF2~ fragment;original_location=join(2005959..2006048%2C2008183..2008662);owner=coffea | |
| 34617 chr10 manual_curation exon 2005431 2006048 . + . Parent=GSCOCT00024767001 | |
| 34618 chr10 manual_curation exon 2008183 2009860 . + . Parent=GSCOCT00024767001 | |
| 34619 chr10 manual_curation CDS 2005959 2006048 . + 0 Parent=GSCOCT00024767001 | |
| 34620 chr10 manual_curation CDS 2008183 2008662 . + 0 Parent=GSCOCT00024767001 | |
| 34621 chr10 manual_curation gene 2009909 2013386 . - . ID=GSCOCG00024768001;Name=Cc10_g02630 | |
| 34622 chr10 manual_curation mRNA 2009909 2013386 . - . ID=GSCOCT00024768001;Parent=GSCOCG00024768001;Name=Cc10_g02630 | |
| 34623 chr10 manual_curation polypeptide 2009999 2013216 . - . ID=GSCOCP00024768001;Dbxref=InterPro:IPR011611,PFAM:PF00294,SwissProt:P45543,SwissProt:Q55480,SwissProt:Q8X839,TAIR:AT1G19600.1,TAIR:AT3G09820.1,TAIR:AT5G03300.1,TrEMBL:A9PFB4,TrEMBL:B9GRL9,TrEMBL:B9H4D1;Derives_from=GSCOCT00024768001;Name=Cc10_g02630;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.7.1.20,PRODUCT:Putative Uncharacterized sugar kinase slr0537,CC_functional_completeness:modules,CC_gene:slr0537,CC_gene:frlD;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024768001~ Putative Uncharacterized sugar kinase slr0537~ slr0537~ modules;original_location=complement(join(2013043..2013216%2C2012003..2012266%2C2011832..2011903%2C2011686..2011724%2C2011341..2011448%2C2010953..2011050%2C2010684..2010807%2C2009999..2010256));owner=coffea | |
| 34624 chr10 manual_curation exon 2009909 2010256 . - . Parent=GSCOCT00024768001 | |
| 34625 chr10 manual_curation exon 2010684 2010807 . - . Parent=GSCOCT00024768001 | |
| 34626 chr10 manual_curation exon 2010953 2011050 . - . Parent=GSCOCT00024768001 | |
| 34627 chr10 manual_curation exon 2011341 2011448 . - . Parent=GSCOCT00024768001 | |
| 34628 chr10 manual_curation exon 2011686 2011724 . - . Parent=GSCOCT00024768001 | |
| 34629 chr10 manual_curation exon 2011832 2011903 . - . Parent=GSCOCT00024768001 | |
| 34630 chr10 manual_curation exon 2012003 2012266 . - . Parent=GSCOCT00024768001 | |
| 34631 chr10 manual_curation exon 2013043 2013386 . - . Parent=GSCOCT00024768001 | |
| 34632 chr10 manual_curation CDS 2009999 2010256 . - 0 Parent=GSCOCT00024768001 | |
| 34633 chr10 manual_curation CDS 2010684 2010807 . - 2 Parent=GSCOCT00024768001 | |
| 34634 chr10 manual_curation CDS 2010953 2011050 . - 0 Parent=GSCOCT00024768001 | |
| 34635 chr10 manual_curation CDS 2011341 2011448 . - 0 Parent=GSCOCT00024768001 | |
| 34636 chr10 manual_curation CDS 2011686 2011724 . - 0 Parent=GSCOCT00024768001 | |
| 34637 chr10 manual_curation CDS 2011832 2011903 . - 0 Parent=GSCOCT00024768001 | |
| 34638 chr10 manual_curation CDS 2012003 2012266 . - 0 Parent=GSCOCT00024768001 | |
| 34639 chr10 manual_curation CDS 2013043 2013216 . - 0 Parent=GSCOCT00024768001 | |
| 34640 chr10 manual_curation gene 2015308 2020720 . - . ID=GSCOCG00024769001;Name=Cc10_g02640 | |
| 34641 chr10 manual_curation mRNA 2015308 2020720 . - . ID=GSCOCT00024769001;Parent=GSCOCG00024769001;Name=Cc10_g02640 | |
| 34642 chr10 manual_curation polypeptide 2015794 2020589 . - . ID=GSCOCP00024769001;Dbxref=InterPro:IPR011004,SUPERFAMILY:SSF51161,SwissProt:Q94AU7,SwissProt:Q9C6B3,SwissProt:Q9FWR5,TAIR:AT1G19580.1,TAIR:AT1G47260.1,TAIR:AT5G66510.2,TrEMBL:A5C3G7,TrEMBL:A9PFJ3,TrEMBL:B9R7W8;Derives_from=GSCOCT00024769001;Name=Cc10_g02640;Ontology_term=CC_evidence_code:ISS,GO:0016740,CC_EC_number:missing_EC_number,PRODUCT:Gamma carbonic anhydrase 1%2C mitochondrial,CC_functional_completeness:complete,CC_gene:GAMMACA1,CC_gene:GAMMACA2,CC_gene:GAMMACA3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024769001~ Gamma carbonic anhydrase 1%2C mitochondrial~ GAMMACA1~ complete;original_location=complement(join(2020475..2020589%2C2019401..2019544%2C2016545..2016670%2C2016255..2016427%2C2015794..2016075));owner=coffea | |
| 34643 chr10 manual_curation exon 2015308 2016075 . - . Parent=GSCOCT00024769001 | |
| 34644 chr10 manual_curation exon 2016255 2016427 . - . Parent=GSCOCT00024769001 | |
| 34645 chr10 manual_curation exon 2016545 2016670 . - . Parent=GSCOCT00024769001 | |
| 34646 chr10 manual_curation exon 2019401 2019544 . - . Parent=GSCOCT00024769001 | |
| 34647 chr10 manual_curation exon 2020475 2020720 . - . Parent=GSCOCT00024769001 | |
| 34648 chr10 manual_curation CDS 2015794 2016075 . - 0 Parent=GSCOCT00024769001 | |
| 34649 chr10 manual_curation CDS 2016255 2016427 . - 1 Parent=GSCOCT00024769001 | |
| 34650 chr10 manual_curation CDS 2016545 2016670 . - 1 Parent=GSCOCT00024769001 | |
| 34651 chr10 manual_curation CDS 2019401 2019544 . - 1 Parent=GSCOCT00024769001 | |
| 34652 chr10 manual_curation CDS 2020475 2020589 . - 0 Parent=GSCOCT00024769001 | |
| 34653 chr10 manual_curation gene 2022685 2023559 . + . ID=GSCOCG00024771001;Name=Cc10_g02650 | |
| 34654 chr10 manual_curation mRNA 2022685 2023559 . + . ID=GSCOCT00024771001;Parent=GSCOCG00024771001;Name=Cc10_g02650 | |
| 34655 chr10 manual_curation polypeptide 2022828 2023438 . + . ID=GSCOCP00024771001;Derives_from=GSCOCT00024771001;Name=Cc10_g02650;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024771001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(2022828..2022945%2C2023200..2023438);owner=coffea | |
| 34656 chr10 manual_curation exon 2022685 2022945 . + . Parent=GSCOCT00024771001 | |
| 34657 chr10 manual_curation exon 2023200 2023559 . + . Parent=GSCOCT00024771001 | |
| 34658 chr10 manual_curation CDS 2022828 2022945 . + 0 Parent=GSCOCT00024771001 | |
| 34659 chr10 manual_curation CDS 2023200 2023438 . + 1 Parent=GSCOCT00024771001 | |
| 34660 chr10 manual_curation gene 2025397 2027566 . - . ID=GSCOCG00024772001;Name=Cc10_g02660 | |
| 34661 chr10 manual_curation mRNA 2025397 2027566 . - . ID=GSCOCT00024772001;Parent=GSCOCG00024772001;Name=Cc10_g02660 | |
| 34662 chr10 manual_curation polypeptide 2025652 2027480 . - . ID=GSCOCP00024772001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR008030,InterPro:IPR016040,PFAM:PF05368,SwissProt:P52577,SwissProt:P52578,SwissProt:P52579,TAIR:AT1G75280.1,TAIR:AT1G75290.1,TAIR:AT4G39230.1,TrEMBL:B2WSN1,TrEMBL:E0CQE7,TrEMBL:Q3KN69;Derives_from=GSCOCT00024772001;Name=Cc10_g02660;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,CC_EC_number:1.3.1.45,PRODUCT:Isoflavone reductase homolog P3,CC_functional_completeness:complete,CC_gene:At1g75280;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024772001~ Isoflavone reductase homolog P3~ At1g75280~ complete;original_location=complement(join(2027298..2027480%2C2027035..2027169%2C2026270..2026507%2C2025917..2026120%2C2025652..2025818));owner=coffea | |
| 34663 chr10 manual_curation exon 2025397 2025818 . - . Parent=GSCOCT00024772001 | |
| 34664 chr10 manual_curation exon 2025917 2026120 . - . Parent=GSCOCT00024772001 | |
| 34665 chr10 manual_curation exon 2026270 2026507 . - . Parent=GSCOCT00024772001 | |
| 34666 chr10 manual_curation exon 2027035 2027169 . - . Parent=GSCOCT00024772001 | |
| 34667 chr10 manual_curation exon 2027298 2027566 . - . Parent=GSCOCT00024772001 | |
| 34668 chr10 manual_curation CDS 2025652 2025818 . - 1 Parent=GSCOCT00024772001 | |
| 34669 chr10 manual_curation CDS 2025917 2026120 . - 1 Parent=GSCOCT00024772001 | |
| 34670 chr10 manual_curation CDS 2026270 2026507 . - 0 Parent=GSCOCT00024772001 | |
| 34671 chr10 manual_curation CDS 2027035 2027169 . - 0 Parent=GSCOCT00024772001 | |
| 34672 chr10 manual_curation CDS 2027298 2027480 . - 0 Parent=GSCOCT00024772001 | |
| 34673 chr10 manual_curation gene 2029803 2031291 . - . ID=GSCOCG00024773001;Name=Cc10_g02670 | |
| 34674 chr10 manual_curation mRNA 2029803 2031291 . - . ID=GSCOCT00024773001;Parent=GSCOCG00024773001;Name=Cc10_g02670 | |
| 34675 chr10 manual_curation polypeptide 2030442 2031206 . - . ID=GSCOCP00024773001;Dbxref=TAIR:AT1G19530.1,TrEMBL:B9H4C6,TrEMBL:B9R7W4,TrEMBL:E0CQE6;Derives_from=GSCOCT00024773001;Name=Cc10_g02670;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024773001~ Putative unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: N-terminal protein myristoylation%2C anaerobic respiration%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: leaf apex%2C inflorescence meristem%2C hypocotyl%2C root%2C flower%3B EXPRESSED DURING: petal differentiation and expansion stage%3B Has 47 Blast hits to 47 proteins in 13 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 47%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(2031155..2031206%2C2030910..2031028%2C2030691..2030821%2C2030442..2030592));owner=coffea | |
| 34676 chr10 manual_curation exon 2029803 2030592 . - . Parent=GSCOCT00024773001 | |
| 34677 chr10 manual_curation exon 2030691 2030821 . - . Parent=GSCOCT00024773001 | |
| 34678 chr10 manual_curation exon 2030910 2031028 . - . Parent=GSCOCT00024773001 | |
| 34679 chr10 manual_curation exon 2031155 2031291 . - . Parent=GSCOCT00024773001 | |
| 34680 chr10 manual_curation CDS 2030442 2030592 . - 2 Parent=GSCOCT00024773001 | |
| 34681 chr10 manual_curation CDS 2030691 2030821 . - 0 Parent=GSCOCT00024773001 | |
| 34682 chr10 manual_curation CDS 2030910 2031028 . - 1 Parent=GSCOCT00024773001 | |
| 34683 chr10 manual_curation CDS 2031155 2031206 . - 0 Parent=GSCOCT00024773001 | |
| 34684 chr10 manual_curation gene 2036769 2038271 . - . ID=GSCOCG00024775001;Name=Cc10_g02680 | |
| 34685 chr10 manual_curation mRNA 2036769 2038271 . - . ID=GSCOCT00024775001;Parent=GSCOCG00024775001;Name=Cc10_g02680 | |
| 34686 chr10 manual_curation polypeptide 2036769 2038147 . - . ID=GSCOCP00024775001;Dbxref=GENE3D:G3DSA:2.160.20.10,InterPro:IPR000070,InterPro:IPR011050,InterPro:IPR012334,PFAM:PF01095,SUPERFAMILY:SSF51126,SwissProt:Q8LPF3,SwissProt:Q9SIJ9,SwissProt:Q9ZQA3,TAIR:AT2G21610.1,TAIR:AT2G36710.1,TAIR:AT5G47500.1,TrEMBL:A5BYJ2,TrEMBL:E0CQE5,TrEMBL:F6I0K6;Derives_from=GSCOCT00024775001;Name=Cc10_g02680;Ontology_term=CC_evidence_code:ISS,GO:0005618,GO:0030599,GO:0042545,CC_EC_number:missing_EC_number,PRODUCT:Putative pectinesterase 11,CC_functional_completeness:complete,CC_gene:PME11,CC_gene:PME15,CC_gene:PME68;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024775001~ Putative pectinesterase 11~ PME11~ complete;original_location=complement(join(2037916..2038147%2C2037749..2037835%2C2037556..2037606%2C2037453..2037460%2C2037216..2037374%2C2037139..2037153%2C2036769..2036963));owner=coffea | |
| 34687 chr10 manual_curation exon 2036769 2036963 . - . Parent=GSCOCT00024775001 | |
| 34688 chr10 manual_curation exon 2037139 2037153 . - . Parent=GSCOCT00024775001 | |
| 34689 chr10 manual_curation exon 2037216 2037374 . - . Parent=GSCOCT00024775001 | |
| 34690 chr10 manual_curation exon 2037453 2037460 . - . Parent=GSCOCT00024775001 | |
| 34691 chr10 manual_curation exon 2037556 2037606 . - . Parent=GSCOCT00024775001 | |
| 34692 chr10 manual_curation exon 2037749 2037835 . - . Parent=GSCOCT00024775001 | |
| 34693 chr10 manual_curation exon 2037916 2038271 . - . Parent=GSCOCT00024775001 | |
| 34694 chr10 manual_curation CDS 2036769 2036963 . - 0 Parent=GSCOCT00024775001 | |
| 34695 chr10 manual_curation CDS 2037139 2037153 . - 0 Parent=GSCOCT00024775001 | |
| 34696 chr10 manual_curation CDS 2037216 2037374 . - 0 Parent=GSCOCT00024775001 | |
| 34697 chr10 manual_curation CDS 2037453 2037460 . - 1 Parent=GSCOCT00024775001 | |
| 34698 chr10 manual_curation CDS 2037556 2037606 . - 1 Parent=GSCOCT00024775001 | |
| 34699 chr10 manual_curation CDS 2037749 2037835 . - 1 Parent=GSCOCT00024775001 | |
| 34700 chr10 manual_curation CDS 2037916 2038147 . - 0 Parent=GSCOCT00024775001 | |
| 34701 chr10 manual_curation gene 2045044 2049177 . + . ID=GSCOCG00024776001;Name=Cc10_g02690 | |
| 34702 chr10 manual_curation mRNA 2045044 2049177 . + . ID=GSCOCT00024776001;Parent=GSCOCG00024776001;Name=Cc10_g02690 | |
| 34703 chr10 manual_curation polypeptide 2046284 2047985 . + . ID=GSCOCP00024776001;Dbxref=GENE3D:G3DSA:3.20.90.10,InterPro:IPR000007,InterPro:IPR001810,InterPro:IPR018066,PFAM:PF00646,PFAM:PF01167,PRINTS:PR01573,PROSITE:PS01200,PROSITE:PS01201,SUPERFAMILY:SSF54518,SwissProt:Q0WPY0,SwissProt:Q6Z2G9,SwissProt:Q8GVE5,TAIR:AT1G25280.1,TAIR:AT1G47270.1,TAIR:AT2G18280.1,TrEMBL:B9S6E9,TrEMBL:F6H054,TrEMBL:I1M8B1;Derives_from=GSCOCT00024776001;Name=Cc10_g02690;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Tubby-like F-box protein 5,CC_functional_completeness:complete,CC_gene:TULP5,CC_gene:TULP6,CC_gene:TULP2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024776001~ Tubby-like F-box protein 5~ TULP5~ complete;original_location=join(2046284..2046640%2C2046805..2046892%2C2047112..2047244%2C2047319..2047985);owner=coffea | |
| 34704 chr10 manual_curation exon 2045044 2045686 . + . Parent=GSCOCT00024776001 | |
| 34705 chr10 manual_curation exon 2046025 2046104 . + . Parent=GSCOCT00024776001 | |
| 34706 chr10 manual_curation exon 2046263 2046640 . + . Parent=GSCOCT00024776001 | |
| 34707 chr10 manual_curation exon 2046805 2046892 . + . Parent=GSCOCT00024776001 | |
| 34708 chr10 manual_curation exon 2047112 2047244 . + . Parent=GSCOCT00024776001 | |
| 34709 chr10 manual_curation exon 2047319 2049177 . + . Parent=GSCOCT00024776001 | |
| 34710 chr10 manual_curation CDS 2046284 2046640 . + 0 Parent=GSCOCT00024776001 | |
| 34711 chr10 manual_curation CDS 2046805 2046892 . + 0 Parent=GSCOCT00024776001 | |
| 34712 chr10 manual_curation CDS 2047112 2047244 . + 1 Parent=GSCOCT00024776001 | |
| 34713 chr10 manual_curation CDS 2047319 2047985 . + 2 Parent=GSCOCT00024776001 | |
| 34714 chr10 manual_curation gene 2049245 2050689 . - . ID=GSCOCG00024777001;Name=Cc10_g02700 | |
| 34715 chr10 manual_curation mRNA 2049245 2050689 . - . ID=GSCOCT00024777001;Parent=GSCOCG00024777001;Name=Cc10_g02700 | |
| 34716 chr10 manual_curation polypeptide 2049245 2050689 . - . ID=GSCOCP00024777001;Derives_from=GSCOCT00024777001;Name=Cc10_g02700;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024777001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(2049610..2050689%2C2049421..2049504%2C2049245..2049274));owner=coffea | |
| 34717 chr10 manual_curation exon 2049245 2049274 . - . Parent=GSCOCT00024777001 | |
| 34718 chr10 manual_curation exon 2049421 2049504 . - . Parent=GSCOCT00024777001 | |
| 34719 chr10 manual_curation exon 2049610 2050689 . - . Parent=GSCOCT00024777001 | |
| 34720 chr10 manual_curation CDS 2049245 2049274 . - 0 Parent=GSCOCT00024777001 | |
| 34721 chr10 manual_curation CDS 2049421 2049504 . - 0 Parent=GSCOCT00024777001 | |
| 34722 chr10 manual_curation CDS 2049610 2050689 . - 0 Parent=GSCOCT00024777001 | |
| 34723 chr10 manual_curation gene 2051092 2052526 . + . ID=GSCOCG00024778001;Name=Cc10_g02710 | |
| 34724 chr10 manual_curation mRNA 2051092 2052526 . + . ID=GSCOCT00024778001;Parent=GSCOCG00024778001;Name=Cc10_g02710 | |
| 34725 chr10 manual_curation polypeptide 2051092 2052526 . + . ID=GSCOCP00024778001;Dbxref=InterPro:IPR000644,PFAM:PF00571,PROFILE:PS51371,SMART:SM00116,SwissProt:Q9LEV3,TAIR:AT1G47271.1,TAIR:AT5G10860.1,TrEMBL:B9GRM7,TrEMBL:B9H4C3,TrEMBL:F6H053;Derives_from=GSCOCT00024778001;Name=Cc10_g02710;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:modules,CC_gene:CBSX3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024778001~ Putative uncharacterized protein~ CBSX3~ modules;original_location=join(2051092..2051115%2C2051412..2051506%2C2051715..2052009%2C2052116..2052197%2C2052278..2052351%2C2052446..2052526);owner=coffea | |
| 34726 chr10 manual_curation exon 2051092 2051115 . + . Parent=GSCOCT00024778001 | |
| 34727 chr10 manual_curation exon 2051412 2051506 . + . Parent=GSCOCT00024778001 | |
| 34728 chr10 manual_curation exon 2051715 2052009 . + . Parent=GSCOCT00024778001 | |
| 34729 chr10 manual_curation exon 2052116 2052197 . + . Parent=GSCOCT00024778001 | |
| 34730 chr10 manual_curation exon 2052278 2052351 . + . Parent=GSCOCT00024778001 | |
| 34731 chr10 manual_curation exon 2052446 2052526 . + . Parent=GSCOCT00024778001 | |
| 34732 chr10 manual_curation CDS 2051092 2051115 . + 0 Parent=GSCOCT00024778001 | |
| 34733 chr10 manual_curation CDS 2051412 2051506 . + 0 Parent=GSCOCT00024778001 | |
| 34734 chr10 manual_curation CDS 2051715 2052009 . + 2 Parent=GSCOCT00024778001 | |
| 34735 chr10 manual_curation CDS 2052116 2052197 . + 0 Parent=GSCOCT00024778001 | |
| 34736 chr10 manual_curation CDS 2052278 2052351 . + 1 Parent=GSCOCT00024778001 | |
| 34737 chr10 manual_curation CDS 2052446 2052526 . + 0 Parent=GSCOCT00024778001 | |
| 34738 chr10 manual_curation gene 2052662 2056612 . - . ID=GSCOCG00024779001;Name=Cc10_g02720 | |
| 34739 chr10 manual_curation mRNA 2052662 2056612 . - . ID=GSCOCT00024779001;Parent=GSCOCG00024779001;Name=Cc10_g02720 | |
| 34740 chr10 manual_curation polypeptide 2052662 2056559 . - . ID=GSCOCP00024779001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q8LEZ4,SwissProt:Q940Z1,SwissProt:Q9LPC4,TAIR:AT1G01970.1,TAIR:AT1G05670.1,TAIR:AT1G19520.1,TIGRFAMs:TIGR00756,TrEMBL:B9R7W0,TrEMBL:F6H052,TrEMBL:I1MXW9;Derives_from=GSCOCT00024779001;Name=Cc10_g02720;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At1g19525,CC_functional_completeness:modules,CC_gene:At1g19525,CC_gene:NFD5,CC_gene:At1g01970;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024779001~ Pentatricopeptide repeat-containing protein At1g19525~ At1g19525~ modules;original_location=complement(join(2055435..2056559%2C2053537..2054546%2C2052662..2052800));owner=coffea | |
| 34741 chr10 manual_curation exon 2052662 2052800 . - . Parent=GSCOCT00024779001 | |
| 34742 chr10 manual_curation exon 2053537 2054546 . - . Parent=GSCOCT00024779001 | |
| 34743 chr10 manual_curation exon 2055435 2056612 . - . Parent=GSCOCT00024779001 | |
| 34744 chr10 manual_curation CDS 2052662 2052800 . - 2 Parent=GSCOCT00024779001 | |
| 34745 chr10 manual_curation CDS 2053537 2054546 . - 0 Parent=GSCOCT00024779001 | |
| 34746 chr10 manual_curation CDS 2055435 2056559 . - 0 Parent=GSCOCT00024779001 | |
| 34747 chr10 manual_curation gene 2066795 2068717 . + . ID=GSCOCG00024780001;Name=Cc10_g02730 | |
| 34748 chr10 manual_curation mRNA 2066795 2068717 . + . ID=GSCOCT00024780001;Parent=GSCOCG00024780001;Name=Cc10_g02730 | |
| 34749 chr10 manual_curation polypeptide 2066953 2068453 . + . ID=GSCOCP00024780001;Dbxref=InterPro:IPR001005,InterPro:IPR009057,InterPro:IPR014778,InterPro:IPR015609,InterPro:IPR017884,PANTHER:PTHR11821,PFAM:PF00249,PROFILE:PS51293,SMART:SM00717,SUPERFAMILY:SSF46689,TAIR:AT1G19510.1,TAIR:AT1G75250.1,TAIR:AT4G39250.1,TrEMBL:B9GRM8,TrEMBL:B9H0R6,TrEMBL:D7TQ27;Derives_from=GSCOCT00024780001;Name=Cc10_g02730;Ontology_term=CC_evidence_code:ISS,GO:0003677,CC_EC_number:missing_EC_number,PRODUCT:RAD-like 1,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024780001~ RAD-like 1~ unknown_gene~ complete;original_location=join(2066953..2067230%2C2068426..2068453);owner=coffea | |
| 34750 chr10 manual_curation exon 2066795 2067230 . + . Parent=GSCOCT00024780001 | |
| 34751 chr10 manual_curation exon 2068426 2068717 . + . Parent=GSCOCT00024780001 | |
| 34752 chr10 manual_curation CDS 2066953 2067230 . + 0 Parent=GSCOCT00024780001 | |
| 34753 chr10 manual_curation CDS 2068426 2068453 . + 2 Parent=GSCOCT00024780001 | |
| 34754 chr10 manual_curation gene 2072374 2073234 . - . ID=GSCOCG00024781001;Name=Cc10_g02740 | |
| 34755 chr10 manual_curation mRNA 2072374 2073234 . - . ID=GSCOCT00024781001;Parent=GSCOCG00024781001;Name=Cc10_g02740 | |
| 34756 chr10 manual_curation polypeptide 2072374 2073234 . - . ID=GSCOCP00024781001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR006455,InterPro:IPR006456,InterPro:IPR012287,PFAM:PF04770,PRODOM:PD125774,SwissProt:Q9FKP8,SwissProt:Q9SB61,SwissProt:Q9SEZ1,TAIR:AT1G14440.1,TAIR:AT1G75240.1,TAIR:AT2G18350.1,TIGRFAMs:TIGR01565,TIGRFAMs:TIGR01566,TrEMBL:B9GRN0,TrEMBL:B9H8Q9,TrEMBL:B9R7V6;Derives_from=GSCOCT00024781001;Name=Cc10_g02740;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative ZF-HD homeobox protein At4g24660,CC_functional_completeness:complete,CC_gene:At4g24660,CC_gene:HB29,CC_gene:At5g65410;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024781001~ Putative ZF-HD homeobox protein At4g24660~ At4g24660~ complete;original_location=complement(2072374..2073234);owner=coffea | |
| 34757 chr10 manual_curation exon 2072374 2073234 . - . Parent=GSCOCT00024781001 | |
| 34758 chr10 manual_curation CDS 2072374 2073234 . - 0 Parent=GSCOCT00024781001 | |
| 34759 chr10 manual_curation gene 2079045 2080265 . + . ID=GSCOCG00024783001;Name=Cc10_g02750 | |
| 34760 chr10 manual_curation mRNA 2079045 2080265 . + . ID=GSCOCT00024783001;Parent=GSCOCG00024783001;Name=Cc10_g02750 | |
| 34761 chr10 manual_curation polypeptide 2079045 2080265 . + . ID=GSCOCP00024783001;Derives_from=GSCOCT00024783001;Name=Cc10_g02750;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024783001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(2079045..2079945%2C2080024..2080265);owner=coffea | |
| 34762 chr10 manual_curation exon 2079045 2079945 . + . Parent=GSCOCT00024783001 | |
| 34763 chr10 manual_curation exon 2080024 2080265 . + . Parent=GSCOCT00024783001 | |
| 34764 chr10 manual_curation CDS 2079045 2079945 . + 0 Parent=GSCOCT00024783001 | |
| 34765 chr10 manual_curation CDS 2080024 2080265 . + 1 Parent=GSCOCT00024783001 | |
| 34766 chr10 manual_curation gene 2083596 2085554 . - . ID=GSCOCG00024784001;Name=Cc10_g02760 | |
| 34767 chr10 manual_curation mRNA 2083596 2085554 . - . ID=GSCOCT00024784001;Parent=GSCOCG00024784001;Name=Cc10_g02760 | |
| 34768 chr10 manual_curation polypeptide 2083596 2085554 . - . ID=GSCOCP00024784001;Dbxref=InterPro:IPR000873,PFAM:PF00501,SwissProt:B2HIL4,SwissProt:B2HIN2,SwissProt:Q7TXM1,TAIR:AT4G05160.1,TAIR:AT4G19010.1,TrEMBL:A5AZD9,TrEMBL:A5AZE1,TrEMBL:F6H600;Derives_from=GSCOCT00024784001;Name=Cc10_g02760;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,CC_EC_number:6.2.1.26,PRODUCT:Putative Long-chain-fatty-acid--AMP ligase FadD29,CC_functional_completeness:complete,CC_gene:fadD29,CC_gene:fadD26;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024784001~ Putative Long-chain-fatty-acid--AMP ligase FadD29~ fadD29~ complete;original_location=complement(join(2083752..2085554%2C2083596..2083712));owner=coffea | |
| 34769 chr10 manual_curation exon 2083596 2083712 . - . Parent=GSCOCT00024784001 | |
| 34770 chr10 manual_curation exon 2083752 2085554 . - . Parent=GSCOCT00024784001 | |
| 34771 chr10 manual_curation CDS 2083596 2083712 . - 0 Parent=GSCOCT00024784001 | |
| 34772 chr10 manual_curation CDS 2083752 2085554 . - 0 Parent=GSCOCT00024784001 | |
| 34773 chr10 manual_curation gene 2087237 2093947 . + . ID=GSCOCG00024785001;Name=Cc10_g02770 | |
| 34774 chr10 manual_curation mRNA 2087237 2093947 . + . ID=GSCOCT00024785001;Parent=GSCOCG00024785001;Name=Cc10_g02770 | |
| 34775 chr10 manual_curation polypeptide 2087418 2093576 . + . ID=GSCOCP00024785001;Dbxref=InterPro:IPR003663,InterPro:IPR005828,InterPro:IPR005829,InterPro:IPR016196,InterPro:IPR020846,PFAM:PF00083,PRINTS:PR00171,PROFILE:PS50850,PROSITE:PS00216,PROSITE:PS00217,SUPERFAMILY:SSF103473,SwissProt:Q8LBI9,SwissProt:Q93YP9,SwissProt:Q9FRL3,TAIR:AT1G19450.1,TAIR:AT1G75220.1,TAIR:AT5G18840.1,TIGRFAMs:TIGR00879,TrEMBL:A5C2I8,TrEMBL:B9R7V2,TrEMBL:D7SPD1;Derives_from=GSCOCT00024785001;Name=Cc10_g02770;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006810,GO:0016020,GO:0016021,GO:0022891,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Sugar transporter ERD6-like 6,CC_functional_completeness:complete,CC_gene:At1g75220,CC_gene:At1g19450,CC_gene:At5g18840;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024785001~ Sugar transporter ERD6-like 6~ At1g75220~ complete;original_location=join(2087418..2087612%2C2087931..2087993%2C2088078..2088167%2C2088304..2088363%2C2088465..2088530%2C2088618..2088683%2C2088781..2088856%2C2089820..2089884%2C2089971..2090063%2C2090313..2090393%2C2090530..2090614%2C2090975..2091021%2C2091247..2091309%2C2091387..2091446%2C2091576..2091641%2C2091733..2091792%2C2092970..2093084%2C2093464..2093576);owner=coffea | |
| 34776 chr10 manual_curation exon 2087237 2087612 . + . Parent=GSCOCT00024785001 | |
| 34777 chr10 manual_curation exon 2087931 2087993 . + . Parent=GSCOCT00024785001 | |
| 34778 chr10 manual_curation exon 2088078 2088167 . + . Parent=GSCOCT00024785001 | |
| 34779 chr10 manual_curation exon 2088304 2088363 . + . Parent=GSCOCT00024785001 | |
| 34780 chr10 manual_curation exon 2088465 2088530 . + . Parent=GSCOCT00024785001 | |
| 34781 chr10 manual_curation exon 2088618 2088683 . + . Parent=GSCOCT00024785001 | |
| 34782 chr10 manual_curation exon 2088781 2088856 . + . Parent=GSCOCT00024785001 | |
| 34783 chr10 manual_curation exon 2089820 2089884 . + . Parent=GSCOCT00024785001 | |
| 34784 chr10 manual_curation exon 2089971 2090063 . + . Parent=GSCOCT00024785001 | |
| 34785 chr10 manual_curation exon 2090313 2090393 . + . Parent=GSCOCT00024785001 | |
| 34786 chr10 manual_curation exon 2090530 2090614 . + . Parent=GSCOCT00024785001 | |
| 34787 chr10 manual_curation exon 2090975 2091021 . + . Parent=GSCOCT00024785001 | |
| 34788 chr10 manual_curation exon 2091247 2091309 . + . Parent=GSCOCT00024785001 | |
| 34789 chr10 manual_curation exon 2091387 2091446 . + . Parent=GSCOCT00024785001 | |
| 34790 chr10 manual_curation exon 2091576 2091641 . + . Parent=GSCOCT00024785001 | |
| 34791 chr10 manual_curation exon 2091733 2091792 . + . Parent=GSCOCT00024785001 | |
| 34792 chr10 manual_curation exon 2092970 2093084 . + . Parent=GSCOCT00024785001 | |
| 34793 chr10 manual_curation exon 2093464 2093947 . + . Parent=GSCOCT00024785001 | |
| 34794 chr10 manual_curation CDS 2087418 2087612 . + 0 Parent=GSCOCT00024785001 | |
| 34795 chr10 manual_curation CDS 2087931 2087993 . + 0 Parent=GSCOCT00024785001 | |
| 34796 chr10 manual_curation CDS 2088078 2088167 . + 0 Parent=GSCOCT00024785001 | |
| 34797 chr10 manual_curation CDS 2088304 2088363 . + 0 Parent=GSCOCT00024785001 | |
| 34798 chr10 manual_curation CDS 2088465 2088530 . + 0 Parent=GSCOCT00024785001 | |
| 34799 chr10 manual_curation CDS 2088618 2088683 . + 0 Parent=GSCOCT00024785001 | |
| 34800 chr10 manual_curation CDS 2088781 2088856 . + 0 Parent=GSCOCT00024785001 | |
| 34801 chr10 manual_curation CDS 2089820 2089884 . + 1 Parent=GSCOCT00024785001 | |
| 34802 chr10 manual_curation CDS 2089971 2090063 . + 0 Parent=GSCOCT00024785001 | |
| 34803 chr10 manual_curation CDS 2090313 2090393 . + 0 Parent=GSCOCT00024785001 | |
| 34804 chr10 manual_curation CDS 2090530 2090614 . + 0 Parent=GSCOCT00024785001 | |
| 34805 chr10 manual_curation CDS 2090975 2091021 . + 1 Parent=GSCOCT00024785001 | |
| 34806 chr10 manual_curation CDS 2091247 2091309 . + 0 Parent=GSCOCT00024785001 | |
| 34807 chr10 manual_curation CDS 2091387 2091446 . + 0 Parent=GSCOCT00024785001 | |
| 34808 chr10 manual_curation CDS 2091576 2091641 . + 0 Parent=GSCOCT00024785001 | |
| 34809 chr10 manual_curation CDS 2091733 2091792 . + 0 Parent=GSCOCT00024785001 | |
| 34810 chr10 manual_curation CDS 2092970 2093084 . + 0 Parent=GSCOCT00024785001 | |
| 34811 chr10 manual_curation CDS 2093464 2093576 . + 1 Parent=GSCOCT00024785001 | |
| 34812 chr10 manual_curation gene 2098219 2099775 . - . ID=GSCOCG00024787001;Name=Cc10_g02780 | |
| 34813 chr10 manual_curation mRNA 2098219 2099775 . - . ID=GSCOCT00024787001;Parent=GSCOCG00024787001;Name=Cc10_g02780 | |
| 34814 chr10 manual_curation polypeptide 2098219 2099775 . - . ID=GSCOCP00024787001;Dbxref=GENE3D:G3DSA:3.40.47.10,InterPro:IPR012392,InterPro:IPR013601,InterPro:IPR013747,InterPro:IPR016038,InterPro:IPR016039,PFAM:PF08392,PFAM:PF08541,PIR:PIRSF036417,SUPERFAMILY:SSF53901,SwissProt:O65677,SwissProt:Q9LN49,SwissProt:Q9SIX1,TAIR:AT1G19440.1,TAIR:AT2G16280.1,TAIR:AT4G34510.1,TrEMBL:B9R7V1,TrEMBL:C3VPA4,TrEMBL:F6HQM8;Derives_from=GSCOCT00024787001;Name=Cc10_g02780;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0006633,GO:0008152,GO:0008610,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:3-ketoacyl-CoA synthase 4,CC_functional_completeness:complete,CC_gene:KCS4,CC_gene:KCS9,CC_gene:KCS2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024787001~ 3-ketoacyl-CoA synthase 4~ KCS4~ complete;original_location=complement(2098219..2099775);owner=coffea | |
| 34815 chr10 manual_curation exon 2098219 2099775 . - . Parent=GSCOCT00024787001 | |
| 34816 chr10 manual_curation CDS 2098219 2099775 . - 0 Parent=GSCOCT00024787001 | |
| 34817 chr10 manual_curation gene 2103912 2108986 . + . ID=GSCOCG00024788001;Name=Cc10_g02790 | |
| 34818 chr10 manual_curation mRNA 2103912 2108986 . + . ID=GSCOCT00024788001;Parent=GSCOCG00024788001;Name=Cc10_g02790 | |
| 34819 chr10 manual_curation polypeptide 2103961 2108812 . + . ID=GSCOCP00024788001;Dbxref=InterPro:IPR003697,PFAM:PF02545,PIR:PIRSF006305,SwissProt:C4ZDP0,SwissProt:Q54TC5,SwissProt:Q892M0,TAIR:AT2G25500.1,TAIR:AT5G42770.2,TAIR:AT5G66550.1,TrEMBL:B9IBF9,TrEMBL:B9R7V0,TrEMBL:E0CQD4;Derives_from=GSCOCT00024788001;Name=Cc10_g02790;Ontology_term=CC_evidence_code:ISS,GO:0005737,CC_EC_number:missing_EC_number,PRODUCT:Putative Maf-like protein DDB_G0281937,CC_functional_completeness:complete,CC_gene:DDB_G0281937,CC_gene:EUBREC_3290,CC_gene:CTC_02076;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024788001~ Putative Maf-like protein DDB_G0281937~ DDB_G0281937~ complete;original_location=join(2103961..2103990%2C2104136..2104207%2C2104310..2104384%2C2104714..2104797%2C2105153..2105233%2C2106481..2106550%2C2106628..2106719%2C2107305..2107346%2C2107427..2107507%2C2108741..2108812);owner=coffea | |
| 34820 chr10 manual_curation exon 2103912 2103990 . + . Parent=GSCOCT00024788001 | |
| 34821 chr10 manual_curation exon 2104136 2104207 . + . Parent=GSCOCT00024788001 | |
| 34822 chr10 manual_curation exon 2104310 2104384 . + . Parent=GSCOCT00024788001 | |
| 34823 chr10 manual_curation exon 2104714 2104797 . + . Parent=GSCOCT00024788001 | |
| 34824 chr10 manual_curation exon 2105153 2105233 . + . Parent=GSCOCT00024788001 | |
| 34825 chr10 manual_curation exon 2106481 2106550 . + . Parent=GSCOCT00024788001 | |
| 34826 chr10 manual_curation exon 2106628 2106719 . + . Parent=GSCOCT00024788001 | |
| 34827 chr10 manual_curation exon 2107305 2107346 . + . Parent=GSCOCT00024788001 | |
| 34828 chr10 manual_curation exon 2107427 2107507 . + . Parent=GSCOCT00024788001 | |
| 34829 chr10 manual_curation exon 2108741 2108986 . + . Parent=GSCOCT00024788001 | |
| 34830 chr10 manual_curation CDS 2103961 2103990 . + 0 Parent=GSCOCT00024788001 | |
| 34831 chr10 manual_curation CDS 2104136 2104207 . + 0 Parent=GSCOCT00024788001 | |
| 34832 chr10 manual_curation CDS 2104310 2104384 . + 0 Parent=GSCOCT00024788001 | |
| 34833 chr10 manual_curation CDS 2104714 2104797 . + 0 Parent=GSCOCT00024788001 | |
| 34834 chr10 manual_curation CDS 2105153 2105233 . + 0 Parent=GSCOCT00024788001 | |
| 34835 chr10 manual_curation CDS 2106481 2106550 . + 0 Parent=GSCOCT00024788001 | |
| 34836 chr10 manual_curation CDS 2106628 2106719 . + 1 Parent=GSCOCT00024788001 | |
| 34837 chr10 manual_curation CDS 2107305 2107346 . + 0 Parent=GSCOCT00024788001 | |
| 34838 chr10 manual_curation CDS 2107427 2107507 . + 0 Parent=GSCOCT00024788001 | |
| 34839 chr10 manual_curation CDS 2108741 2108812 . + 0 Parent=GSCOCT00024788001 | |
| 34840 chr10 manual_curation gene 2111420 2112127 . - . ID=GSCOCG00024789001;Name=Cc10_g02800 | |
| 34841 chr10 manual_curation mRNA 2111420 2112127 . - . ID=GSCOCT00024789001;Parent=GSCOCG00024789001;Name=Cc10_g02800 | |
| 34842 chr10 manual_curation polypeptide 2111552 2112054 . - . ID=GSCOCP00024789001;Dbxref=InterPro:IPR001005,InterPro:IPR009057,InterPro:IPR015609,InterPro:IPR017884,PANTHER:PTHR11821,PROFILE:PS51293,SMART:SM00717,SUPERFAMILY:SSF46689,TAIR:AT1G75250.1,TAIR:AT2G21650.1,TAIR:AT4G39250.1,TrEMBL:B9R7U9,TrEMBL:E0CQD3,TrEMBL:I1M8C0;Derives_from=GSCOCT00024789001;Name=Cc10_g02800;Ontology_term=CC_evidence_code:ISS,GO:0003677,CC_EC_number:missing_EC_number,PRODUCT:RAD-like 1,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024789001~ RAD-like 1~ unknown_gene~ complete;original_location=complement(join(2111795..2112054%2C2111552..2111576));owner=coffea | |
| 34843 chr10 manual_curation exon 2111420 2111576 . - . Parent=GSCOCT00024789001 | |
| 34844 chr10 manual_curation exon 2111795 2112127 . - . Parent=GSCOCT00024789001 | |
| 34845 chr10 manual_curation CDS 2111552 2111576 . - 2 Parent=GSCOCT00024789001 | |
| 34846 chr10 manual_curation CDS 2111795 2112054 . - 0 Parent=GSCOCT00024789001 | |
| 34847 chr10 manual_curation gene 2119636 2125111 . + . ID=GSCOCG00024790001;Name=Cc10_g02810 | |
| 34848 chr10 manual_curation mRNA 2119636 2125111 . + . ID=GSCOCT00024790001;Parent=GSCOCG00024790001;Name=Cc10_g02810 | |
| 34849 chr10 manual_curation polypeptide 2120712 2124445 . + . ID=GSCOCP00024790001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR011009,InterPro:IPR020635,PFAM:PF00560,PFAM:PF07714,PROFILE:PS50011,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:C0LGK4,SwissProt:C0LGQ5,SwissProt:Q9SHI2,TAIR:AT1G17230.1,TAIR:AT2G16250.1,TAIR:AT4G39270.1,TrEMBL:B9R7U7,TrEMBL:B9RBF5,TrEMBL:F6H047;Derives_from=GSCOCT00024790001;Name=Cc10_g02810;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At2g16250,CC_functional_completeness:complete,CC_gene:At2g16250,CC_gene:At1g17230,CC_gene:GSO1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024790001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At2g16250~ At2g16250~ complete;original_location=join(2120712..2121090%2C2121151..2122594%2C2122798..2122926%2C2123372..2123394%2C2123844..2124445);owner=coffea | |
| 34850 chr10 manual_curation exon 2119636 2121090 . + . Parent=GSCOCT00024790001 | |
| 34851 chr10 manual_curation exon 2121151 2122594 . + . Parent=GSCOCT00024790001 | |
| 34852 chr10 manual_curation exon 2122798 2122926 . + . Parent=GSCOCT00024790001 | |
| 34853 chr10 manual_curation exon 2123372 2123394 . + . Parent=GSCOCT00024790001 | |
| 34854 chr10 manual_curation exon 2123844 2125111 . + . Parent=GSCOCT00024790001 | |
| 34855 chr10 manual_curation CDS 2120712 2121090 . + 0 Parent=GSCOCT00024790001 | |
| 34856 chr10 manual_curation CDS 2121151 2122594 . + 1 Parent=GSCOCT00024790001 | |
| 34857 chr10 manual_curation CDS 2122798 2122926 . + 2 Parent=GSCOCT00024790001 | |
| 34858 chr10 manual_curation CDS 2123372 2123394 . + 2 Parent=GSCOCT00024790001 | |
| 34859 chr10 manual_curation CDS 2123844 2124445 . + 1 Parent=GSCOCT00024790001 | |
| 34860 chr10 manual_curation gene 2131524 2132863 . - . ID=GSCOCG00024791001;Name=Cc10_g02820 | |
| 34861 chr10 manual_curation mRNA 2131524 2132863 . - . ID=GSCOCT00024791001;Parent=GSCOCG00024791001;Name=Cc10_g02820 | |
| 34862 chr10 manual_curation polypeptide 2131524 2132677 . - . ID=GSCOCP00024791001;Dbxref=InterPro:IPR000719,InterPro:IPR011009,PROFILE:PS50011,SUPERFAMILY:SSF56112,SwissProt:Q559T8,TAIR:AT1G45160.2,TAIR:AT1G48490.1,TAIR:AT3G17850.1,TrEMBL:B9R7R7,TrEMBL:D7KPT0,TrEMBL:F6H1H6;Derives_from=GSCOCT00024791001;Name=Cc10_g02820;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0005524,GO:0006468,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:DDB_G0272282;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024791001~ Hypothetical protein~ DDB_G0272282~ missing_functional_completeness;original_location=complement(join(2132534..2132677%2C2132185..2132241%2C2131784..2131855%2C2131524..2131661));owner=coffea | |
| 34863 chr10 manual_curation exon 2131524 2131661 . - . Parent=GSCOCT00024791001 | |
| 34864 chr10 manual_curation exon 2131784 2131855 . - . Parent=GSCOCT00024791001 | |
| 34865 chr10 manual_curation exon 2132185 2132241 . - . Parent=GSCOCT00024791001 | |
| 34866 chr10 manual_curation exon 2132534 2132863 . - . Parent=GSCOCT00024791001 | |
| 34867 chr10 manual_curation CDS 2131524 2131661 . - 0 Parent=GSCOCT00024791001 | |
| 34868 chr10 manual_curation CDS 2131784 2131855 . - 0 Parent=GSCOCT00024791001 | |
| 34869 chr10 manual_curation CDS 2132185 2132241 . - 0 Parent=GSCOCT00024791001 | |
| 34870 chr10 manual_curation CDS 2132534 2132677 . - 0 Parent=GSCOCT00024791001 | |
| 34871 chr10 manual_curation gene 2132973 2143897 . - . ID=GSCOCG00024792001;Name=Cc10_g02830 | |
| 34872 chr10 manual_curation mRNA 2132973 2143897 . - . ID=GSCOCT00024792001;Parent=GSCOCG00024792001;Name=Cc10_g02830 | |
| 34873 chr10 manual_curation polypeptide 2133325 2143478 . - . ID=GSCOCP00024792001;Dbxref=InterPro:IPR008380,PANTHER:PTHR12103,PFAM:PF05761,SwissProt:Q3V1L4,SwissProt:Q54XC1,SwissProt:Q5RA22,TAIR:AT1G75210.1,TAIR:AT2G23890.1,TAIR:AT5G48960.1,TIGRFAMs:TIGR02244,TrEMBL:D7KSL6,TrEMBL:F6H046,TrEMBL:Q8RWN4;Derives_from=GSCOCT00024792001;Name=Cc10_g02830;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Cytosolic purine 5'-nucleotidase,CC_functional_completeness:modules,CC_gene:nt5c2,CC_gene:Nt5c2,CC_gene:NT5C2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024792001~ Putative Cytosolic purine 5'-nucleotidase~ nt5c2~ modules;original_location=complement(join(2143001..2143478%2C2141274..2141584%2C2140896..2140973%2C2140568..2140788%2C2139874..2139966%2C2139606..2139689%2C2138146..2138262%2C2137104..2137209%2C2136873..2136935%2C2136681..2136734%2C2136288..2136345%2C2135400..2135476%2C2134532..2134602%2C2134183..2134240%2C2133803..2133862%2C2133565..2133627%2C2133325..2133447));owner=coffea | |
| 34874 chr10 manual_curation exon 2132973 2133447 . - . Parent=GSCOCT00024792001 | |
| 34875 chr10 manual_curation exon 2133565 2133627 . - . Parent=GSCOCT00024792001 | |
| 34876 chr10 manual_curation exon 2133803 2133862 . - . Parent=GSCOCT00024792001 | |
| 34877 chr10 manual_curation exon 2134183 2134240 . - . Parent=GSCOCT00024792001 | |
| 34878 chr10 manual_curation exon 2134532 2134602 . - . Parent=GSCOCT00024792001 | |
| 34879 chr10 manual_curation exon 2135400 2135476 . - . Parent=GSCOCT00024792001 | |
| 34880 chr10 manual_curation exon 2136288 2136345 . - . Parent=GSCOCT00024792001 | |
| 34881 chr10 manual_curation exon 2136681 2136734 . - . Parent=GSCOCT00024792001 | |
| 34882 chr10 manual_curation exon 2136873 2136935 . - . Parent=GSCOCT00024792001 | |
| 34883 chr10 manual_curation exon 2137104 2137209 . - . Parent=GSCOCT00024792001 | |
| 34884 chr10 manual_curation exon 2138146 2138262 . - . Parent=GSCOCT00024792001 | |
| 34885 chr10 manual_curation exon 2139606 2139689 . - . Parent=GSCOCT00024792001 | |
| 34886 chr10 manual_curation exon 2139874 2139966 . - . Parent=GSCOCT00024792001 | |
| 34887 chr10 manual_curation exon 2140568 2140788 . - . Parent=GSCOCT00024792001 | |
| 34888 chr10 manual_curation exon 2140896 2140973 . - . Parent=GSCOCT00024792001 | |
| 34889 chr10 manual_curation exon 2141274 2141584 . - . Parent=GSCOCT00024792001 | |
| 34890 chr10 manual_curation exon 2143001 2143897 . - . Parent=GSCOCT00024792001 | |
| 34891 chr10 manual_curation CDS 2133325 2133447 . - 0 Parent=GSCOCT00024792001 | |
| 34892 chr10 manual_curation CDS 2133565 2133627 . - 0 Parent=GSCOCT00024792001 | |
| 34893 chr10 manual_curation CDS 2133803 2133862 . - 0 Parent=GSCOCT00024792001 | |
| 34894 chr10 manual_curation CDS 2134183 2134240 . - 2 Parent=GSCOCT00024792001 | |
| 34895 chr10 manual_curation CDS 2134532 2134602 . - 0 Parent=GSCOCT00024792001 | |
| 34896 chr10 manual_curation CDS 2135400 2135476 . - 1 Parent=GSCOCT00024792001 | |
| 34897 chr10 manual_curation CDS 2136288 2136345 . - 0 Parent=GSCOCT00024792001 | |
| 34898 chr10 manual_curation CDS 2136681 2136734 . - 0 Parent=GSCOCT00024792001 | |
| 34899 chr10 manual_curation CDS 2136873 2136935 . - 0 Parent=GSCOCT00024792001 | |
| 34900 chr10 manual_curation CDS 2137104 2137209 . - 2 Parent=GSCOCT00024792001 | |
| 34901 chr10 manual_curation CDS 2138146 2138262 . - 2 Parent=GSCOCT00024792001 | |
| 34902 chr10 manual_curation CDS 2139606 2139689 . - 2 Parent=GSCOCT00024792001 | |
| 34903 chr10 manual_curation CDS 2139874 2139966 . - 2 Parent=GSCOCT00024792001 | |
| 34904 chr10 manual_curation CDS 2140568 2140788 . - 0 Parent=GSCOCT00024792001 | |
| 34905 chr10 manual_curation CDS 2140896 2140973 . - 0 Parent=GSCOCT00024792001 | |
| 34906 chr10 manual_curation CDS 2141274 2141584 . - 1 Parent=GSCOCT00024792001 | |
| 34907 chr10 manual_curation CDS 2143001 2143478 . - 0 Parent=GSCOCT00024792001 | |
| 34908 chr10 manual_curation gene 2156128 2158348 . + . ID=GSCOCG00024793001;Name=Cc10_g02840 | |
| 34909 chr10 manual_curation mRNA 2156128 2158348 . + . ID=GSCOCT00024793001;Parent=GSCOCG00024793001;Name=Cc10_g02840 | |
| 34910 chr10 manual_curation polypeptide 2156128 2157903 . + . ID=GSCOCP00024793001;Dbxref=TAIR:AT5G42765.1,TrEMBL:B9IBG3,TrEMBL:B9R7U3,TrEMBL:E0CQC9;Derives_from=GSCOCT00024793001;Name=Cc10_g02840;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Predicted protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024793001~ Predicted protein~ unknown_gene~ modules;original_location=join(2156128..2156371%2C2156510..2156617%2C2156725..2156855%2C2157139..2157239%2C2157675..2157734%2C2157819..2157903);owner=coffea | |
| 34911 chr10 manual_curation exon 2156128 2156371 . + . Parent=GSCOCT00024793001 | |
| 34912 chr10 manual_curation exon 2156510 2156617 . + . Parent=GSCOCT00024793001 | |
| 34913 chr10 manual_curation exon 2156725 2156855 . + . Parent=GSCOCT00024793001 | |
| 34914 chr10 manual_curation exon 2157139 2157239 . + . Parent=GSCOCT00024793001 | |
| 34915 chr10 manual_curation exon 2157675 2157734 . + . Parent=GSCOCT00024793001 | |
| 34916 chr10 manual_curation exon 2157819 2158348 . + . Parent=GSCOCT00024793001 | |
| 34917 chr10 manual_curation CDS 2156128 2156371 . + 0 Parent=GSCOCT00024793001 | |
| 34918 chr10 manual_curation CDS 2156510 2156617 . + 1 Parent=GSCOCT00024793001 | |
| 34919 chr10 manual_curation CDS 2156725 2156855 . + 1 Parent=GSCOCT00024793001 | |
| 34920 chr10 manual_curation CDS 2157139 2157239 . + 0 Parent=GSCOCT00024793001 | |
| 34921 chr10 manual_curation CDS 2157675 2157734 . + 2 Parent=GSCOCT00024793001 | |
| 34922 chr10 manual_curation CDS 2157819 2157903 . + 2 Parent=GSCOCT00024793001 | |
| 34923 chr10 manual_curation gene 2158765 2160716 . - . ID=GSCOCG00024794001;Name=Cc10_g02850 | |
| 34924 chr10 manual_curation mRNA 2158765 2160716 . - . ID=GSCOCT00024794001;Parent=GSCOCG00024794001;Name=Cc10_g02850 | |
| 34925 chr10 manual_curation polypeptide 2158839 2160456 . - . ID=GSCOCP00024794001;Dbxref=InterPro:IPR007213,InterPro:IPR011610,PFAM:PF04072,SwissProt:A0QMX9,SwissProt:A8LHA4,SwissProt:Q0RJ34,TAIR:AT5G42760.2,TIGRFAMs:TIGR00027,TrEMBL:A5AHU1,TrEMBL:A9PFD8,TrEMBL:B9R7U2;Derives_from=GSCOCT00024794001;Name=Cc10_g02850;Ontology_term=CC_evidence_code:ISS,GO:0008168,CC_EC_number:missing_EC_number,PRODUCT:Leucine carboxyl methyltransferase,CC_functional_completeness:complete,CC_gene:Franean1_4929,CC_gene:FRAAL3836,CC_gene:MAV_5150;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024794001~ Leucine carboxyl methyltransferase~ Franean1_4929~ complete;original_location=complement(join(2160072..2160456%2C2158839..2159467));owner=coffea | |
| 34926 chr10 manual_curation exon 2158765 2159467 . - . Parent=GSCOCT00024794001 | |
| 34927 chr10 manual_curation exon 2160072 2160716 . - . Parent=GSCOCT00024794001 | |
| 34928 chr10 manual_curation CDS 2158839 2159467 . - 1 Parent=GSCOCT00024794001 | |
| 34929 chr10 manual_curation CDS 2160072 2160456 . - 0 Parent=GSCOCT00024794001 | |
| 34930 chr10 manual_curation gene 2164079 2169314 . + . ID=GSCOCG00024795001;Name=Cc10_g02860 | |
| 34931 chr10 manual_curation mRNA 2164079 2169314 . + . ID=GSCOCT00024795001;Parent=GSCOCG00024795001;Name=Cc10_g02860 | |
| 34932 chr10 manual_curation polypeptide 2164435 2168949 . + . ID=GSCOCP00024795001;Dbxref=InterPro:IPR002550,PFAM:PF01595,SwissProt:Q8RY60,SwissProt:Q8VZI2,SwissProt:Q9ZQR4,TAIR:AT1G47330.1,TAIR:AT2G14520.1,TAIR:AT4G33700.1,TrEMBL:A5AHU2,TrEMBL:E0CQC7,TrEMBL:I1K7S1;Derives_from=GSCOCT00024795001;Name=Cc10_g02860;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:DUF21 domain-containing protein At1g47330,CC_functional_completeness:complete,CC_gene:CBSDUF7,CC_gene:CBSDUF3,CC_gene:CBSDUF6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024795001~ DUF21 domain-containing protein At1g47330~ CBSDUF7~ complete;original_location=join(2164435..2164615%2C2165159..2165235%2C2165320..2165403%2C2165506..2165619%2C2165799..2165885%2C2166118..2166257%2C2166342..2166429%2C2166653..2166726%2C2167512..2167630%2C2167954..2168186%2C2168454..2168500%2C2168814..2168949);owner=coffea | |
| 34933 chr10 manual_curation exon 2164079 2164615 . + . Parent=GSCOCT00024795001 | |
| 34934 chr10 manual_curation exon 2165159 2165235 . + . Parent=GSCOCT00024795001 | |
| 34935 chr10 manual_curation exon 2165320 2165403 . + . Parent=GSCOCT00024795001 | |
| 34936 chr10 manual_curation exon 2165506 2165619 . + . Parent=GSCOCT00024795001 | |
| 34937 chr10 manual_curation exon 2165799 2165885 . + . Parent=GSCOCT00024795001 | |
| 34938 chr10 manual_curation exon 2166118 2166257 . + . Parent=GSCOCT00024795001 | |
| 34939 chr10 manual_curation exon 2166342 2166429 . + . Parent=GSCOCT00024795001 | |
| 34940 chr10 manual_curation exon 2166653 2166726 . + . Parent=GSCOCT00024795001 | |
| 34941 chr10 manual_curation exon 2167512 2167630 . + . Parent=GSCOCT00024795001 | |
| 34942 chr10 manual_curation exon 2167954 2168186 . + . Parent=GSCOCT00024795001 | |
| 34943 chr10 manual_curation exon 2168454 2168500 . + . Parent=GSCOCT00024795001 | |
| 34944 chr10 manual_curation exon 2168814 2169314 . + . Parent=GSCOCT00024795001 | |
| 34945 chr10 manual_curation CDS 2164435 2164615 . + 0 Parent=GSCOCT00024795001 | |
| 34946 chr10 manual_curation CDS 2165159 2165235 . + 1 Parent=GSCOCT00024795001 | |
| 34947 chr10 manual_curation CDS 2165320 2165403 . + 0 Parent=GSCOCT00024795001 | |
| 34948 chr10 manual_curation CDS 2165506 2165619 . + 0 Parent=GSCOCT00024795001 | |
| 34949 chr10 manual_curation CDS 2165799 2165885 . + 0 Parent=GSCOCT00024795001 | |
| 34950 chr10 manual_curation CDS 2166118 2166257 . + 0 Parent=GSCOCT00024795001 | |
| 34951 chr10 manual_curation CDS 2166342 2166429 . + 2 Parent=GSCOCT00024795001 | |
| 34952 chr10 manual_curation CDS 2166653 2166726 . + 0 Parent=GSCOCT00024795001 | |
| 34953 chr10 manual_curation CDS 2167512 2167630 . + 2 Parent=GSCOCT00024795001 | |
| 34954 chr10 manual_curation CDS 2167954 2168186 . + 1 Parent=GSCOCT00024795001 | |
| 34955 chr10 manual_curation CDS 2168454 2168500 . + 0 Parent=GSCOCT00024795001 | |
| 34956 chr10 manual_curation CDS 2168814 2168949 . + 2 Parent=GSCOCT00024795001 | |
| 34957 chr10 manual_curation gene 2170472 2176295 . + . ID=GSCOCG00024796001;Name=Cc10_g02870 | |
| 34958 chr10 manual_curation mRNA 2170472 2176295 . + . ID=GSCOCT00024796001;Parent=GSCOCG00024796001;Name=Cc10_g02870 | |
| 34959 chr10 manual_curation polypeptide 2171014 2175803 . + . ID=GSCOCP00024796001;Dbxref=InterPro:IPR004159,PFAM:PF03141,SwissProt:Q0WT31,SwissProt:Q6NPR7,SwissProt:Q9LN50,TAIR:AT1G19430.1,TAIR:AT1G29470.1,TAIR:AT2G34300.1,TrEMBL:B9GRY4,TrEMBL:B9R7U0,TrEMBL:E0CQC6;Derives_from=GSCOCT00024796001;Name=Cc10_g02870;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Probable methyltransferase PMT28,CC_functional_completeness:complete,CC_gene:At1g19430,CC_gene:At1g29470,CC_gene:At2g34300;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024796001~ Probable methyltransferase PMT28~ At1g19430~ complete;original_location=join(2171014..2171895%2C2171960..2172115%2C2172647..2172917%2C2173008..2173100%2C2173723..2173897%2C2174573..2174815%2C2175029..2175223%2C2175605..2175803);owner=coffea | |
| 34960 chr10 manual_curation exon 2170472 2171895 . + . Parent=GSCOCT00024796001 | |
| 34961 chr10 manual_curation exon 2171960 2172115 . + . Parent=GSCOCT00024796001 | |
| 34962 chr10 manual_curation exon 2172647 2172917 . + . Parent=GSCOCT00024796001 | |
| 34963 chr10 manual_curation exon 2173008 2173100 . + . Parent=GSCOCT00024796001 | |
| 34964 chr10 manual_curation exon 2173723 2173897 . + . Parent=GSCOCT00024796001 | |
| 34965 chr10 manual_curation exon 2174573 2174815 . + . Parent=GSCOCT00024796001 | |
| 34966 chr10 manual_curation exon 2175029 2175223 . + . Parent=GSCOCT00024796001 | |
| 34967 chr10 manual_curation exon 2175605 2176295 . + . Parent=GSCOCT00024796001 | |
| 34968 chr10 manual_curation CDS 2171014 2171895 . + 0 Parent=GSCOCT00024796001 | |
| 34969 chr10 manual_curation CDS 2171960 2172115 . + 0 Parent=GSCOCT00024796001 | |
| 34970 chr10 manual_curation CDS 2172647 2172917 . + 0 Parent=GSCOCT00024796001 | |
| 34971 chr10 manual_curation CDS 2173008 2173100 . + 1 Parent=GSCOCT00024796001 | |
| 34972 chr10 manual_curation CDS 2173723 2173897 . + 1 Parent=GSCOCT00024796001 | |
| 34973 chr10 manual_curation CDS 2174573 2174815 . + 2 Parent=GSCOCT00024796001 | |
| 34974 chr10 manual_curation CDS 2175029 2175223 . + 2 Parent=GSCOCT00024796001 | |
| 34975 chr10 manual_curation CDS 2175605 2175803 . + 2 Parent=GSCOCT00024796001 | |
| 34976 chr10 manual_curation gene 2176739 2179154 . + . ID=GSCOCG00024797001;Name=Cc10_g02880 | |
| 34977 chr10 manual_curation mRNA 2176739 2179154 . + . ID=GSCOCT00024797001;Parent=GSCOCG00024797001;Name=Cc10_g02880 | |
| 34978 chr10 manual_curation polypeptide 2176827 2179154 . + . ID=GSCOCP00024797001;Dbxref=InterPro:IPR001094,InterPro:IPR008254,PFAM:PF00258,PRINTS:PR00369,PROFILE:PS50902,SwissProt:Q2KHP8,SwissProt:Q8H8N3,SwissProt:Q8RXN5,TAIR:AT1G75200.1,TAIR:AT4G24520.1,TrEMBL:F6H045,TrEMBL:I1M8C6,TrEMBL:I1M8C7;Derives_from=GSCOCT00024797001;Name=Cc10_g02880;Ontology_term=CC_evidence_code:ISS,GO:0005506,GO:0010181,GO:0016491,GO:0055114,CC_EC_number:1.6.2.4,PRODUCT:tRNA wybutosine-synthesizing protein 1 homolog,CC_functional_completeness:fragment,CC_gene:TYW1,CC_gene:tyw1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024797001~ tRNA wybutosine-synthesizing protein 1 homolog~ TYW1~ fragment;original_location=join(2176827..2177690%2C2178353..2178468%2C2178968..2179154);owner=coffea | |
| 34979 chr10 manual_curation exon 2176739 2177690 . + . Parent=GSCOCT00024797001 | |
| 34980 chr10 manual_curation exon 2178353 2178468 . + . Parent=GSCOCT00024797001 | |
| 34981 chr10 manual_curation exon 2178968 2179154 . + . Parent=GSCOCT00024797001 | |
| 34982 chr10 manual_curation CDS 2176827 2177690 . + 0 Parent=GSCOCT00024797001 | |
| 34983 chr10 manual_curation CDS 2178353 2178468 . + 0 Parent=GSCOCT00024797001 | |
| 34984 chr10 manual_curation CDS 2178968 2179154 . + 2 Parent=GSCOCT00024797001 | |
| 34985 chr10 manual_curation gene 2179234 2181273 . + . ID=GSCOCG00024798001;Name=Cc10_g02890 | |
| 34986 chr10 manual_curation mRNA 2179234 2181273 . + . ID=GSCOCT00024798001;Parent=GSCOCG00024798001;Name=Cc10_g02890 | |
| 34987 chr10 manual_curation polypeptide 2179234 2180956 . + . ID=GSCOCP00024798001;Dbxref=InterPro:IPR007197,InterPro:IPR013917,PFAM:PF04055,PFAM:PF08608,SwissProt:Q08C92,SwissProt:Q8H8N3,SwissProt:Q8RXN5,TAIR:AT1G75200.1,TrEMBL:A5AHU2,TrEMBL:B9R7T9,TrEMBL:G8E4B8;Derives_from=GSCOCT00024798001;Name=Cc10_g02890;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0051536,CC_EC_number:missing_EC_number,PRODUCT:tRNA wybutosine-synthesizing protein 1 homolog,CC_functional_completeness:fragment,CC_gene:TYW1,CC_gene:tyw1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024798001~ tRNA wybutosine-synthesizing protein 1 homolog~ TYW1~ fragment;original_location=join(2179234..2179240%2C2179430..2179620%2C2179716..2179802%2C2180208..2180365%2C2180522..2180732%2C2180816..2180956);owner=coffea | |
| 34988 chr10 manual_curation exon 2179234 2179240 . + . Parent=GSCOCT00024798001 | |
| 34989 chr10 manual_curation exon 2179430 2179620 . + . Parent=GSCOCT00024798001 | |
| 34990 chr10 manual_curation exon 2179716 2179802 . + . Parent=GSCOCT00024798001 | |
| 34991 chr10 manual_curation exon 2180208 2180365 . + . Parent=GSCOCT00024798001 | |
| 34992 chr10 manual_curation exon 2180522 2180732 . + . Parent=GSCOCT00024798001 | |
| 34993 chr10 manual_curation exon 2180816 2181273 . + . Parent=GSCOCT00024798001 | |
| 34994 chr10 manual_curation CDS 2179234 2179240 . + 0 Parent=GSCOCT00024798001 | |
| 34995 chr10 manual_curation CDS 2179430 2179620 . + 1 Parent=GSCOCT00024798001 | |
| 34996 chr10 manual_curation CDS 2179716 2179802 . + 0 Parent=GSCOCT00024798001 | |
| 34997 chr10 manual_curation CDS 2180208 2180365 . + 0 Parent=GSCOCT00024798001 | |
| 34998 chr10 manual_curation CDS 2180522 2180732 . + 2 Parent=GSCOCT00024798001 | |
| 34999 chr10 manual_curation CDS 2180816 2180956 . + 0 Parent=GSCOCT00024798001 | |
| 35000 chr10 manual_curation gene 2183460 2183858 . - . ID=GSCOCG00024799001;Name=Cc10_g02900 | |
| 35001 chr10 manual_curation mRNA 2183460 2183858 . - . ID=GSCOCT00024799001;Parent=GSCOCG00024799001;Name=Cc10_g02900 | |
| 35002 chr10 manual_curation polypeptide 2183460 2183858 . - . ID=GSCOCP00024799001;Dbxref=InterPro:IPR017956,PFAM:PF02178,TrEMBL:B9NBA1;Derives_from=GSCOCT00024799001;Name=Cc10_g02900;Ontology_term=CC_evidence_code:ISS,GO:0003677,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024799001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(2183460..2183858);owner=coffea | |
| 35003 chr10 manual_curation exon 2183460 2183858 . - . Parent=GSCOCT00024799001 | |
| 35004 chr10 manual_curation CDS 2183460 2183858 . - 0 Parent=GSCOCT00024799001 | |
| 35005 chr10 manual_curation gene 2189037 2193693 . + . ID=GSCOCG00024801001;Name=Cc10_g02910 | |
| 35006 chr10 manual_curation mRNA 2189037 2193693 . + . ID=GSCOCT00024801001;Parent=GSCOCG00024801001;Name=Cc10_g02910 | |
| 35007 chr10 manual_curation polypeptide 2190270 2193219 . + . ID=GSCOCP00024801001;Dbxref=SwissProt:Q8GUH2,TAIR:AT1G01500.1,TAIR:AT1G19400.1,TAIR:AT1G75180.1,TrEMBL:B9GRY7,TrEMBL:B9R7T7,TrEMBL:F6H1I4;Derives_from=GSCOCT00024801001;Name=Cc10_g02910;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized protein At1g01500,CC_functional_completeness:complete,CC_gene:At1g01500;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024801001~ Putative Uncharacterized protein At1g01500~ At1g01500~ complete;original_location=join(2190270..2190971%2C2192986..2193219);owner=coffea | |
| 35008 chr10 manual_curation exon 2189037 2190971 . + . Parent=GSCOCT00024801001 | |
| 35009 chr10 manual_curation exon 2192986 2193693 . + . Parent=GSCOCT00024801001 | |
| 35010 chr10 manual_curation CDS 2190270 2190971 . + 0 Parent=GSCOCT00024801001 | |
| 35011 chr10 manual_curation CDS 2192986 2193219 . + 0 Parent=GSCOCT00024801001 | |
| 35012 chr10 manual_curation gene 2193909 2198028 . - . ID=GSCOCG00024802001;Name=Cc10_g02920 | |
| 35013 chr10 manual_curation mRNA 2193909 2198028 . - . ID=GSCOCT00024802001;Parent=GSCOCG00024802001;Name=Cc10_g02920 | |
| 35014 chr10 manual_curation polypeptide 2194194 2196462 . - . ID=GSCOCP00024802001;Dbxref=GENE3D:G3DSA:3.40.525.10,InterPro:IPR001071,InterPro:IPR001251,InterPro:IPR008273,InterPro:IPR011074,PFAM:PF00650,PFAM:PF03765,PRINTS:PR00180,PROFILE:PS50191,SMART:SM00516,SUPERFAMILY:SSF46938,SUPERFAMILY:SSF52087,SwissProt:P53860,SwissProt:Q55CU8,SwissProt:Q9UU99,TAIR:AT1G22180.2,TAIR:AT1G75170.1,TAIR:AT4G36640.1,TrEMBL:B9MXP3,TrEMBL:B9R7T6,TrEMBL:F6H1I3;Derives_from=GSCOCT00024802001;Name=Cc10_g02920;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0005622,GO:0006810,CC_EC_number:missing_EC_number,PRODUCT:Putative Random slug protein 5,CC_functional_completeness:fragment,CC_gene:SPCC23B6.04c,CC_gene:rsc5,CC_gene:PDR16;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024802001~ Putative Random slug protein 5~ SPCC23B6.04c~ fragment;original_location=complement(join(2196403..2196462%2C2195601..2195777%2C2195217..2195315%2C2194850..2195095%2C2194194..2194481));owner=coffea | |
| 35015 chr10 manual_curation exon 2197805 2198028 . - . Parent=GSCOCT00024802001 | |
| 35016 chr10 manual_curation exon 2193909 2194481 . - . Parent=GSCOCT00024802001 | |
| 35017 chr10 manual_curation exon 2194850 2195095 . - . Parent=GSCOCT00024802001 | |
| 35018 chr10 manual_curation exon 2195217 2195315 . - . Parent=GSCOCT00024802001 | |
| 35019 chr10 manual_curation exon 2195601 2195777 . - . Parent=GSCOCT00024802001 | |
| 35020 chr10 manual_curation exon 2196403 2196470 . - . Parent=GSCOCT00024802001 | |
| 35021 chr10 manual_curation CDS 2194194 2194481 . - 0 Parent=GSCOCT00024802001 | |
| 35022 chr10 manual_curation CDS 2194850 2195095 . - 0 Parent=GSCOCT00024802001 | |
| 35023 chr10 manual_curation CDS 2195217 2195315 . - 0 Parent=GSCOCT00024802001 | |
| 35024 chr10 manual_curation CDS 2195601 2195777 . - 0 Parent=GSCOCT00024802001 | |
| 35025 chr10 manual_curation CDS 2196403 2196462 . - 0 Parent=GSCOCT00024802001 | |
| 35026 chr10 manual_curation gene 2210419 2211916 . - . ID=GSCOCG00024807001;Name=Cc10_g02930 | |
| 35027 chr10 manual_curation mRNA 2210419 2211916 . - . ID=GSCOCT00024807001;Parent=GSCOCG00024807001;Name=Cc10_g02930 | |
| 35028 chr10 manual_curation polypeptide 2210419 2211916 . - . ID=GSCOCP00024807001;Derives_from=GSCOCT00024807001;Name=Cc10_g02930;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024807001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(2211886..2211916%2C2210665..2210746%2C2210419..2210497));owner=coffea | |
| 35029 chr10 manual_curation exon 2210419 2210497 . - . Parent=GSCOCT00024807001 | |
| 35030 chr10 manual_curation exon 2210665 2210746 . - . Parent=GSCOCT00024807001 | |
| 35031 chr10 manual_curation exon 2211886 2211916 . - . Parent=GSCOCT00024807001 | |
| 35032 chr10 manual_curation CDS 2210419 2210497 . - 2 Parent=GSCOCT00024807001 | |
| 35033 chr10 manual_curation CDS 2210665 2210746 . - 1 Parent=GSCOCT00024807001 | |
| 35034 chr10 manual_curation CDS 2211886 2211916 . - 0 Parent=GSCOCT00024807001 | |
| 35035 chr10 manual_curation gene 2214072 2218538 . + . ID=GSCOCG00024808001;Name=Cc10_g02940 | |
| 35036 chr10 manual_curation mRNA 2214072 2218538 . + . ID=GSCOCT00024808001;Parent=GSCOCG00024808001;Name=Cc10_g02940 | |
| 35037 chr10 manual_curation polypeptide 2214321 2218538 . + . ID=GSCOCP00024808001;Dbxref=TAIR:AT5G42710.1,TrEMBL:B9GRZ2,TrEMBL:B9R7T3,TrEMBL:F6H1I1;Derives_from=GSCOCT00024808001;Name=Cc10_g02940;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024808001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=join(2214321..2214429%2C2214844..2214905%2C2215009..2217237%2C2217380..2217503%2C2217913..2218538);owner=coffea | |
| 35038 chr10 manual_curation exon 2214072 2214429 . + . Parent=GSCOCT00024808001 | |
| 35039 chr10 manual_curation exon 2214844 2214905 . + . Parent=GSCOCT00024808001 | |
| 35040 chr10 manual_curation exon 2215009 2217237 . + . Parent=GSCOCT00024808001 | |
| 35041 chr10 manual_curation exon 2217380 2217503 . + . Parent=GSCOCT00024808001 | |
| 35042 chr10 manual_curation exon 2217913 2218538 . + . Parent=GSCOCT00024808001 | |
| 35043 chr10 manual_curation CDS 2214321 2214429 . + 0 Parent=GSCOCT00024808001 | |
| 35044 chr10 manual_curation CDS 2214844 2214905 . + 1 Parent=GSCOCT00024808001 | |
| 35045 chr10 manual_curation CDS 2215009 2217237 . + 0 Parent=GSCOCT00024808001 | |
| 35046 chr10 manual_curation CDS 2217380 2217503 . + 0 Parent=GSCOCT00024808001 | |
| 35047 chr10 manual_curation CDS 2217913 2218538 . + 1 Parent=GSCOCT00024808001 | |
| 35048 chr10 manual_curation gene 2223976 2227738 . + . ID=GSCOCG00024809001;Name=Cc10_g02950 | |
| 35049 chr10 manual_curation mRNA 2223976 2227738 . + . ID=GSCOCT00024809001;Parent=GSCOCG00024809001;Name=Cc10_g02950 | |
| 35050 chr10 manual_curation polypeptide 2224354 2227414 . + . ID=GSCOCP00024809001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR000490,InterPro:IPR012946,InterPro:IPR013781,InterPro:IPR017853,PFAM:PF00332,PFAM:PF07983,SMART:SM00768,SUPERFAMILY:SSF51445,SwissProt:P52409,SwissProt:Q8VYE5,SwissProt:Q9M069,TAIR:AT2G16230.1,TAIR:AT4G34480.1,TAIR:AT5G42720.1,TrEMBL:B9R7T0,TrEMBL:D7TQ09,TrEMBL:E0CQB9;Derives_from=GSCOCT00024809001;Name=Cc10_g02950;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0043169,CC_EC_number:3.2.1.39,PRODUCT:Glucan endo-1%2C3-beta-glucosidase 7,CC_functional_completeness:complete,CC_gene:At4g34480,CC_gene:GLC1,CC_gene:At4g29360;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024809001~ Glucan endo-1%2C3-beta-glucosidase 7~ At4g34480~ complete;original_location=join(2224354..2224420%2C2224571..2225235%2C2225509..2225832%2C2226537..2226843%2C2227374..2227414);owner=coffea | |
| 35051 chr10 manual_curation exon 2223976 2224420 . + . Parent=GSCOCT00024809001 | |
| 35052 chr10 manual_curation exon 2224571 2225235 . + . Parent=GSCOCT00024809001 | |
| 35053 chr10 manual_curation exon 2225509 2225832 . + . Parent=GSCOCT00024809001 | |
| 35054 chr10 manual_curation exon 2226537 2226843 . + . Parent=GSCOCT00024809001 | |
| 35055 chr10 manual_curation exon 2227374 2227738 . + . Parent=GSCOCT00024809001 | |
| 35056 chr10 manual_curation CDS 2224354 2224420 . + 0 Parent=GSCOCT00024809001 | |
| 35057 chr10 manual_curation CDS 2224571 2225235 . + 1 Parent=GSCOCT00024809001 | |
| 35058 chr10 manual_curation CDS 2225509 2225832 . + 0 Parent=GSCOCT00024809001 | |
| 35059 chr10 manual_curation CDS 2226537 2226843 . + 0 Parent=GSCOCT00024809001 | |
| 35060 chr10 manual_curation CDS 2227374 2227414 . + 1 Parent=GSCOCT00024809001 | |
| 35061 chr10 manual_curation gene 2230800 2235721 . + . ID=GSCOCG00024811001;Name=Cc10_g02960 | |
| 35062 chr10 manual_curation mRNA 2230800 2235721 . + . ID=GSCOCT00024811001;Parent=GSCOCG00024811001;Name=Cc10_g02960 | |
| 35063 chr10 manual_curation polypeptide 2231117 2235721 . + . ID=GSCOCP00024811001;Dbxref=InterPro:IPR001672,InterPro:IPR018189,PANTHER:PTHR11469,PFAM:PF00342,PRINTS:PR00662,PROSITE:PS00765,SwissProt:P34795,SwissProt:Q9FXM4,SwissProt:Q9FXM5,TAIR:AT4G24620.1,TAIR:AT5G42740.1,TrEMBL:B9R7S8,TrEMBL:Q1PCD2,TrEMBL:Q68HC9;Derives_from=GSCOCT00024811001;Name=Cc10_g02960;Ontology_term=CC_evidence_code:ISS,GO:0004347,GO:0006094,GO:0006096,CC_EC_number:5.3.1.9,PRODUCT:Glucose-6-phosphate isomerase%2C cytosolic,CC_functional_completeness:fragment,CC_gene:PGIC;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024811001~ Glucose-6-phosphate isomerase%2C cytosolic~ PGIC~ fragment;original_location=join(2231117..2231167%2C2231239..2231315%2C2231493..2231574%2C2231657..2231704%2C2231829..2231984%2C2232061..2232157%2C2232299..2232341%2C2233381..2233448%2C2233540..2233624%2C2233977..2234025%2C2234161..2234233%2C2234305..2234365%2C2234952..2235018%2C2235487..2235543%2C2235656..2235721);owner=coffea | |
| 35064 chr10 manual_curation exon 2230800 2230916 . + . Parent=GSCOCT00024811001 | |
| 35065 chr10 manual_curation exon 2231117 2231167 . + . Parent=GSCOCT00024811001 | |
| 35066 chr10 manual_curation exon 2231239 2231315 . + . Parent=GSCOCT00024811001 | |
| 35067 chr10 manual_curation exon 2231493 2231574 . + . Parent=GSCOCT00024811001 | |
| 35068 chr10 manual_curation exon 2231657 2231704 . + . Parent=GSCOCT00024811001 | |
| 35069 chr10 manual_curation exon 2231829 2231984 . + . Parent=GSCOCT00024811001 | |
| 35070 chr10 manual_curation exon 2232061 2232157 . + . Parent=GSCOCT00024811001 | |
| 35071 chr10 manual_curation exon 2232299 2232341 . + . Parent=GSCOCT00024811001 | |
| 35072 chr10 manual_curation exon 2233381 2233448 . + . Parent=GSCOCT00024811001 | |
| 35073 chr10 manual_curation exon 2233540 2233624 . + . Parent=GSCOCT00024811001 | |
| 35074 chr10 manual_curation exon 2233977 2234025 . + . Parent=GSCOCT00024811001 | |
| 35075 chr10 manual_curation exon 2234161 2234233 . + . Parent=GSCOCT00024811001 | |
| 35076 chr10 manual_curation exon 2234305 2234365 . + . Parent=GSCOCT00024811001 | |
| 35077 chr10 manual_curation exon 2234952 2235018 . + . Parent=GSCOCT00024811001 | |
| 35078 chr10 manual_curation exon 2235487 2235543 . + . Parent=GSCOCT00024811001 | |
| 35079 chr10 manual_curation exon 2235656 2235721 . + . Parent=GSCOCT00024811001 | |
| 35080 chr10 manual_curation CDS 2231117 2231167 . + 0 Parent=GSCOCT00024811001 | |
| 35081 chr10 manual_curation CDS 2231239 2231315 . + 0 Parent=GSCOCT00024811001 | |
| 35082 chr10 manual_curation CDS 2231493 2231574 . + 2 Parent=GSCOCT00024811001 | |
| 35083 chr10 manual_curation CDS 2231657 2231704 . + 0 Parent=GSCOCT00024811001 | |
| 35084 chr10 manual_curation CDS 2231829 2231984 . + 0 Parent=GSCOCT00024811001 | |
| 35085 chr10 manual_curation CDS 2232061 2232157 . + 0 Parent=GSCOCT00024811001 | |
| 35086 chr10 manual_curation CDS 2232299 2232341 . + 1 Parent=GSCOCT00024811001 | |
| 35087 chr10 manual_curation CDS 2233381 2233448 . + 2 Parent=GSCOCT00024811001 | |
| 35088 chr10 manual_curation CDS 2233540 2233624 . + 1 Parent=GSCOCT00024811001 | |
| 35089 chr10 manual_curation CDS 2233977 2234025 . + 2 Parent=GSCOCT00024811001 | |
| 35090 chr10 manual_curation CDS 2234161 2234233 . + 0 Parent=GSCOCT00024811001 | |
| 35091 chr10 manual_curation CDS 2234305 2234365 . + 1 Parent=GSCOCT00024811001 | |
| 35092 chr10 manual_curation CDS 2234952 2235018 . + 2 Parent=GSCOCT00024811001 | |
| 35093 chr10 manual_curation CDS 2235487 2235543 . + 0 Parent=GSCOCT00024811001 | |
| 35094 chr10 manual_curation CDS 2235656 2235721 . + 0 Parent=GSCOCT00024811001 | |
| 35095 chr10 manual_curation gene 2235798 2238793 . + . ID=GSCOCG00024812001;Name=Cc10_g02970 | |
| 35096 chr10 manual_curation mRNA 2235798 2238793 . + . ID=GSCOCT00024812001;Parent=GSCOCG00024812001;Name=Cc10_g02970 | |
| 35097 chr10 manual_curation polypeptide 2235798 2238125 . + . ID=GSCOCP00024812001;Dbxref=InterPro:IPR001672,InterPro:IPR018189,PANTHER:PTHR11469,PFAM:PF00342,PRINTS:PR00662,PROSITE:PS00174,SwissProt:P54236,SwissProt:P54239,SwissProt:P54240,TAIR:AT5G42740.1,TrEMBL:B9R7S8,TrEMBL:G7KJZ8,TrEMBL:Q68HC9;Derives_from=GSCOCT00024812001;Name=Cc10_g02970;Ontology_term=CC_evidence_code:ISS,GO:0004347,GO:0006094,GO:0006096,CC_EC_number:missing_EC_number,PRODUCT:Glucose-6-phosphate isomerase%2C cytosolic 1,CC_functional_completeness:fragment,CC_gene:PGIC1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024812001~ Glucose-6-phosphate isomerase%2C cytosolic 1~ PGIC1~ fragment;original_location=join(2235798..2235920%2C2236239..2236302%2C2236397..2236470%2C2236719..2236772%2C2236850..2236918%2C2237565..2237654%2C2237884..2237991%2C2238075..2238125);owner=coffea | |
| 35098 chr10 manual_curation exon 2235798 2235920 . + . Parent=GSCOCT00024812001 | |
| 35099 chr10 manual_curation exon 2236239 2236302 . + . Parent=GSCOCT00024812001 | |
| 35100 chr10 manual_curation exon 2236397 2236470 . + . Parent=GSCOCT00024812001 | |
| 35101 chr10 manual_curation exon 2236719 2236772 . + . Parent=GSCOCT00024812001 | |
| 35102 chr10 manual_curation exon 2236850 2236918 . + . Parent=GSCOCT00024812001 | |
| 35103 chr10 manual_curation exon 2237565 2237654 . + . Parent=GSCOCT00024812001 | |
| 35104 chr10 manual_curation exon 2237884 2237991 . + . Parent=GSCOCT00024812001 | |
| 35105 chr10 manual_curation exon 2238075 2238793 . + . Parent=GSCOCT00024812001 | |
| 35106 chr10 manual_curation CDS 2235798 2235920 . + 0 Parent=GSCOCT00024812001 | |
| 35107 chr10 manual_curation CDS 2236239 2236302 . + 0 Parent=GSCOCT00024812001 | |
| 35108 chr10 manual_curation CDS 2236397 2236470 . + 1 Parent=GSCOCT00024812001 | |
| 35109 chr10 manual_curation CDS 2236719 2236772 . + 0 Parent=GSCOCT00024812001 | |
| 35110 chr10 manual_curation CDS 2236850 2236918 . + 0 Parent=GSCOCT00024812001 | |
| 35111 chr10 manual_curation CDS 2237565 2237654 . + 0 Parent=GSCOCT00024812001 | |
| 35112 chr10 manual_curation CDS 2237884 2237991 . + 0 Parent=GSCOCT00024812001 | |
| 35113 chr10 manual_curation CDS 2238075 2238125 . + 0 Parent=GSCOCT00024812001 | |
| 35114 chr10 manual_curation gene 2239035 2239697 . + . ID=GSCOCG00024813001;Name=Cc10_g02980 | |
| 35115 chr10 manual_curation mRNA 2239035 2239697 . + . ID=GSCOCT00024813001;Parent=GSCOCG00024813001;Name=Cc10_g02980 | |
| 35116 chr10 manual_curation polypeptide 2239180 2239557 . + . ID=GSCOCP00024813001;Dbxref=InterPro:IPR001841,InterPro:IPR018957,PFAM:PF00097,PROFILE:PS50089,SMART:SM00184,SwissProt:Q8LBA0,SwissProt:Q9M0R5,TAIR:AT1G72200.1,TAIR:AT1G74410.1,TAIR:AT3G05200.1,TrEMBL:D7KS15,TrEMBL:G7J5U8,TrEMBL:I1K7G8;Derives_from=GSCOCT00024813001;Name=Cc10_g02980;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative RING-H2 finger protein ATL36,CC_functional_completeness:fragment,CC_gene:ATL24,CC_gene:ATL36;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024813001~ Putative RING-H2 finger protein ATL36~ ATL24~ fragment;original_location=2239180..2239557;owner=coffea | |
| 35117 chr10 manual_curation exon 2239035 2239697 . + . Parent=GSCOCT00024813001 | |
| 35118 chr10 manual_curation CDS 2239180 2239557 . + 0 Parent=GSCOCT00024813001 | |
| 35119 chr10 manual_curation gene 2239782 2240532 . - . ID=GSCOCG00024814001;Name=Cc10_g02990 | |
| 35120 chr10 manual_curation mRNA 2239782 2240532 . - . ID=GSCOCT00024814001;Parent=GSCOCG00024814001;Name=Cc10_g02990 | |
| 35121 chr10 manual_curation polypeptide 2239910 2240503 . - . ID=GSCOCP00024814001;Dbxref=InterPro:IPR008180,InterPro:IPR008181,PFAM:PF00692,SwissProt:P32518,SwissProt:Q10FF9,SwissProt:Q9STG6,TAIR:AT3G46940.1,TIGRFAMs:TIGR00576,TrEMBL:A5B885,TrEMBL:E0CQ38,TrEMBL:F6HA96;Derives_from=GSCOCT00024814001;Name=Cc10_g02990;Ontology_term=CC_evidence_code:ISS,GO:0004170,GO:0016787,GO:0046080,CC_EC_number:3.6.1.23,CC_EC_number:3.6.1.23,PRODUCT:Deoxyuridine 5'-triphosphate nucleotidohydrolase,CC_functional_completeness:fragment,CC_gene:DUT;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024814001~ Deoxyuridine 5'-triphosphate nucleotidohydrolase~ DUT~ fragment;original_location=complement(join(2240373..2240503%2C2240204..2240295%2C2239910..2240106));owner=coffea | |
| 35122 chr10 manual_curation exon 2239782 2240106 . - . Parent=GSCOCT00024814001 | |
| 35123 chr10 manual_curation exon 2240204 2240295 . - . Parent=GSCOCT00024814001 | |
| 35124 chr10 manual_curation exon 2240373 2240532 . - . Parent=GSCOCT00024814001 | |
| 35125 chr10 manual_curation CDS 2239910 2240106 . - 1 Parent=GSCOCT00024814001 | |
| 35126 chr10 manual_curation CDS 2240204 2240295 . - 2 Parent=GSCOCT00024814001 | |
| 35127 chr10 manual_curation CDS 2240373 2240503 . - 0 Parent=GSCOCT00024814001 | |
| 35128 chr10 manual_curation gene 2240767 2241937 . - . ID=GSCOCG00024815001;Name=Cc10_g03000 | |
| 35129 chr10 manual_curation mRNA 2240767 2241937 . - . ID=GSCOCT00024815001;Parent=GSCOCG00024815001;Name=Cc10_g03000 | |
| 35130 chr10 manual_curation polypeptide 2241064 2241768 . - . ID=GSCOCP00024815001;Dbxref=InterPro:IPR008180,InterPro:IPR008181,PFAM:PF00692,SwissProt:P32518,SwissProt:Q10FF9,SwissProt:Q9STG6,TAIR:AT3G46940.1,TIGRFAMs:TIGR00576,TrEMBL:A9PDL6,TrEMBL:D7LN88,TrEMBL:E0CQ38;Derives_from=GSCOCT00024815001;Name=Cc10_g03000;Ontology_term=CC_evidence_code:ISS,GO:0004170,GO:0016787,GO:0046080,CC_EC_number:3.6.1.23,CC_EC_number:3.6.1.23,PRODUCT:Deoxyuridine 5'-triphosphate nucleotidohydrolase,CC_functional_completeness:complete,CC_gene:DUT;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024815001~ Deoxyuridine 5'-triphosphate nucleotidohydrolase~ DUT~ complete;original_location=complement(join(2241578..2241768%2C2241394..2241485%2C2241064..2241308));owner=coffea | |
| 35131 chr10 manual_curation exon 2240767 2241308 . - . Parent=GSCOCT00024815001 | |
| 35132 chr10 manual_curation exon 2241394 2241485 . - . Parent=GSCOCT00024815001 | |
| 35133 chr10 manual_curation exon 2241578 2241937 . - . Parent=GSCOCT00024815001 | |
| 35134 chr10 manual_curation CDS 2241064 2241308 . - 1 Parent=GSCOCT00024815001 | |
| 35135 chr10 manual_curation CDS 2241394 2241485 . - 2 Parent=GSCOCT00024815001 | |
| 35136 chr10 manual_curation CDS 2241578 2241768 . - 0 Parent=GSCOCT00024815001 | |
| 35137 chr10 manual_curation gene 2245729 2256150 . + . ID=GSCOCG00024816001;Name=Cc10_g03010 | |
| 35138 chr10 manual_curation mRNA 2245729 2256150 . + . ID=GSCOCT00024816001;Parent=GSCOCG00024816001;Name=Cc10_g03010 | |
| 35139 chr10 manual_curation polypeptide 2245846 2255837 . + . ID=GSCOCP00024816001;Dbxref=InterPro:IPR003169,PFAM:PF02213,PROFILE:PS50829,SMART:SM00444,SUPERFAMILY:SSF55277,SwissProt:Q6Y7W8,TAIR:AT1G24300.1,TAIR:AT1G27430.1,TAIR:AT5G42950.1,TrEMBL:B9GRZ8,TrEMBL:B9R7S6,TrEMBL:F6H1I0;Derives_from=GSCOCT00024816001;Name=Cc10_g03010;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative GYF domain-containing protein,CC_functional_completeness:complete,CC_gene:Gigyf2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024816001~ Putative GYF domain-containing protein~ Gigyf2~ complete;original_location=join(2245846..2245894%2C2247844..2247929%2C2248120..2249022%2C2249110..2249230%2C2249350..2249538%2C2249899..2250678%2C2250774..2253426%2C2254548..2254732%2C2254814..2254873%2C2255449..2255837);owner=coffea | |
| 35140 chr10 manual_curation exon 2245729 2245894 . + . Parent=GSCOCT00024816001 | |
| 35141 chr10 manual_curation exon 2247844 2247929 . + . Parent=GSCOCT00024816001 | |
| 35142 chr10 manual_curation exon 2248120 2249022 . + . Parent=GSCOCT00024816001 | |
| 35143 chr10 manual_curation exon 2249110 2249230 . + . Parent=GSCOCT00024816001 | |
| 35144 chr10 manual_curation exon 2249350 2249538 . + . Parent=GSCOCT00024816001 | |
| 35145 chr10 manual_curation exon 2249899 2250678 . + . Parent=GSCOCT00024816001 | |
| 35146 chr10 manual_curation exon 2250774 2253426 . + . Parent=GSCOCT00024816001 | |
| 35147 chr10 manual_curation exon 2254548 2254732 . + . Parent=GSCOCT00024816001 | |
| 35148 chr10 manual_curation exon 2254814 2254873 . + . Parent=GSCOCT00024816001 | |
| 35149 chr10 manual_curation exon 2255449 2256150 . + . Parent=GSCOCT00024816001 | |
| 35150 chr10 manual_curation CDS 2245846 2245894 . + 0 Parent=GSCOCT00024816001 | |
| 35151 chr10 manual_curation CDS 2247844 2247929 . + 1 Parent=GSCOCT00024816001 | |
| 35152 chr10 manual_curation CDS 2248120 2249022 . + 0 Parent=GSCOCT00024816001 | |
| 35153 chr10 manual_curation CDS 2249110 2249230 . + 0 Parent=GSCOCT00024816001 | |
| 35154 chr10 manual_curation CDS 2249350 2249538 . + 1 Parent=GSCOCT00024816001 | |
| 35155 chr10 manual_curation CDS 2249899 2250678 . + 1 Parent=GSCOCT00024816001 | |
| 35156 chr10 manual_curation CDS 2250774 2253426 . + 1 Parent=GSCOCT00024816001 | |
| 35157 chr10 manual_curation CDS 2254548 2254732 . + 2 Parent=GSCOCT00024816001 | |
| 35158 chr10 manual_curation CDS 2254814 2254873 . + 1 Parent=GSCOCT00024816001 | |
| 35159 chr10 manual_curation CDS 2255449 2255837 . + 1 Parent=GSCOCT00024816001 | |
| 35160 chr10 manual_curation gene 2257511 2260333 . - . ID=GSCOCG00024817001;Name=Cc10_g03020 | |
| 35161 chr10 manual_curation mRNA 2257511 2260333 . - . ID=GSCOCT00024817001;Parent=GSCOCG00024817001;Name=Cc10_g03020 | |
| 35162 chr10 manual_curation polypeptide 2257733 2260333 . - . ID=GSCOCP00024817001;Dbxref=InterPro:IPR010608,PFAM:PF06708,TAIR:AT1G19380.1,TAIR:AT4G36660.1,TAIR:AT5G65650.1,TrEMBL:A9XLD8,TrEMBL:A9XLF8,TrEMBL:B9R7S5;Derives_from=GSCOCT00024817001;Name=Cc10_g03020;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF1195),CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024817001~ Protein of unknown function (DUF1195)~ unknown_gene~ modules;original_location=complement(join(2260067..2260333%2C2259444..2259676%2C2257733..2257799));owner=coffea | |
| 35163 chr10 manual_curation exon 2257511 2257799 . - . Parent=GSCOCT00024817001 | |
| 35164 chr10 manual_curation exon 2259444 2259676 . - . Parent=GSCOCT00024817001 | |
| 35165 chr10 manual_curation exon 2260067 2260333 . - . Parent=GSCOCT00024817001 | |
| 35166 chr10 manual_curation CDS 2257733 2257799 . - 2 Parent=GSCOCT00024817001 | |
| 35167 chr10 manual_curation CDS 2259444 2259676 . - 0 Parent=GSCOCT00024817001 | |
| 35168 chr10 manual_curation CDS 2260067 2260333 . - 0 Parent=GSCOCT00024817001 | |
| 35169 chr10 manual_curation gene 2267310 2269733 . - . ID=GSCOCG00024821001;Name=Cc10_g03030 | |
| 35170 chr10 manual_curation mRNA 2267310 2269733 . - . ID=GSCOCT00024821001;Parent=GSCOCG00024821001;Name=Cc10_g03030 | |
| 35171 chr10 manual_curation polypeptide 2267310 2269733 . - . ID=GSCOCP00024821001;Dbxref=InterPro:IPR006873,PFAM:PF04788,TAIR:AT1G75160.1,TAIR:AT5G05840.1,TAIR:AT5G66740.1,TrEMBL:B9GRZ9,TrEMBL:B9IB68,TrEMBL:F6H1H9;Derives_from=GSCOCT00024821001;Name=Cc10_g03030;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF620),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024821001~ Protein of unknown function (DUF620)~ unknown_gene~ complete;original_location=complement(join(2269443..2269733%2C2268528..2268869%2C2267310..2267816));owner=coffea | |
| 35172 chr10 manual_curation exon 2267310 2267816 . - . Parent=GSCOCT00024821001 | |
| 35173 chr10 manual_curation exon 2268528 2268869 . - . Parent=GSCOCT00024821001 | |
| 35174 chr10 manual_curation exon 2269443 2269733 . - . Parent=GSCOCT00024821001 | |
| 35175 chr10 manual_curation CDS 2267310 2267816 . - 0 Parent=GSCOCT00024821001 | |
| 35176 chr10 manual_curation CDS 2268528 2268869 . - 0 Parent=GSCOCT00024821001 | |
| 35177 chr10 manual_curation CDS 2269443 2269733 . - 0 Parent=GSCOCT00024821001 | |
| 35178 chr10 manual_curation gene 2274957 2278925 . - . ID=GSCOCG00024823001;Name=Cc10_g03040 | |
| 35179 chr10 manual_curation mRNA 2274957 2278925 . - . ID=GSCOCT00024823001;Parent=GSCOCG00024823001;Name=Cc10_g03040 | |
| 35180 chr10 manual_curation polypeptide 2275213 2278925 . - . ID=GSCOCP00024823001;Dbxref=TAIR:AT3G56870.1,TrEMBL:B9R7S1,TrEMBL:E0CQ32,TrEMBL:I1JM09;Derives_from=GSCOCT00024823001;Name=Cc10_g03040;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024823001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=complement(join(2278751..2278925%2C2277378..2278693%2C2277210..2277288%2C2276062..2276480%2C2275502..2275600%2C2275213..2275368));owner=coffea | |
| 35181 chr10 manual_curation exon 2274957 2275368 . - . Parent=GSCOCT00024823001 | |
| 35182 chr10 manual_curation exon 2275502 2275600 . - . Parent=GSCOCT00024823001 | |
| 35183 chr10 manual_curation exon 2276062 2276480 . - . Parent=GSCOCT00024823001 | |
| 35184 chr10 manual_curation exon 2277210 2277288 . - . Parent=GSCOCT00024823001 | |
| 35185 chr10 manual_curation exon 2277378 2278693 . - . Parent=GSCOCT00024823001 | |
| 35186 chr10 manual_curation exon 2278751 2278925 . - . Parent=GSCOCT00024823001 | |
| 35187 chr10 manual_curation CDS 2275213 2275368 . - 0 Parent=GSCOCT00024823001 | |
| 35188 chr10 manual_curation CDS 2275502 2275600 . - 0 Parent=GSCOCT00024823001 | |
| 35189 chr10 manual_curation CDS 2276062 2276480 . - 1 Parent=GSCOCT00024823001 | |
| 35190 chr10 manual_curation CDS 2277210 2277288 . - 0 Parent=GSCOCT00024823001 | |
| 35191 chr10 manual_curation CDS 2277378 2278693 . - 1 Parent=GSCOCT00024823001 | |
| 35192 chr10 manual_curation CDS 2278751 2278925 . - 0 Parent=GSCOCT00024823001 | |
| 35193 chr10 manual_curation gene 2281766 2284454 . + . ID=GSCOCG00024824001;Name=Cc10_g03050 | |
| 35194 chr10 manual_curation mRNA 2281766 2284454 . + . ID=GSCOCT00024824001;Parent=GSCOCG00024824001;Name=Cc10_g03050 | |
| 35195 chr10 manual_curation polypeptide 2281834 2284220 . + . ID=GSCOCP00024824001;Dbxref=SwissProt:O49929,SwissProt:Q1H5C9,SwissProt:Q8H0Y1,TAIR:AT1G45170.1,TAIR:AT5G42960.1,TrEMBL:B9IB63,TrEMBL:B9R7S0,TrEMBL:I1M8E3;Derives_from=GSCOCT00024824001;Name=Cc10_g03050;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Outer envelope pore protein 24B%2C chloroplastic,CC_functional_completeness:complete,CC_gene:OEP24B,CC_gene:OEP24A,CC_gene:OEP24;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024824001~ Outer envelope pore protein 24B%2C chloroplastic~ OEP24B~ complete;original_location=join(2281834..2282031%2C2282117..2282476%2C2284140..2284220);owner=coffea | |
| 35196 chr10 manual_curation exon 2281766 2282031 . + . Parent=GSCOCT00024824001 | |
| 35197 chr10 manual_curation exon 2282117 2282476 . + . Parent=GSCOCT00024824001 | |
| 35198 chr10 manual_curation exon 2284140 2284454 . + . Parent=GSCOCT00024824001 | |
| 35199 chr10 manual_curation CDS 2281834 2282031 . + 0 Parent=GSCOCT00024824001 | |
| 35200 chr10 manual_curation CDS 2282117 2282476 . + 0 Parent=GSCOCT00024824001 | |
| 35201 chr10 manual_curation CDS 2284140 2284220 . + 0 Parent=GSCOCT00024824001 | |
| 35202 chr10 manual_curation gene 2285321 2289597 . + . ID=GSCOCG00024825001;Name=Cc10_g03060 | |
| 35203 chr10 manual_curation mRNA 2285321 2289597 . + . ID=GSCOCT00024825001;Parent=GSCOCG00024825001;Name=Cc10_g03060 | |
| 35204 chr10 manual_curation polypeptide 2285321 2289404 . + . ID=GSCOCP00024825001;Dbxref=TAIR:AT1G75150.1,TrEMBL:B9R7R9,TrEMBL:E0CQ30,TrEMBL:I1K7S8;Derives_from=GSCOCT00024825001;Name=Cc10_g03060;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024825001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=join(2285321..2285983%2C2286115..2286169%2C2286269..2286368%2C2286466..2286697%2C2286922..2286975%2C2287067..2287206%2C2287479..2288037%2C2288125..2288239%2C2288385..2288434%2C2288818..2288961%2C2289162..2289404);owner=coffea | |
| 35205 chr10 manual_curation exon 2285321 2285983 . + . Parent=GSCOCT00024825001 | |
| 35206 chr10 manual_curation exon 2286115 2286169 . + . Parent=GSCOCT00024825001 | |
| 35207 chr10 manual_curation exon 2286269 2286368 . + . Parent=GSCOCT00024825001 | |
| 35208 chr10 manual_curation exon 2286466 2286697 . + . Parent=GSCOCT00024825001 | |
| 35209 chr10 manual_curation exon 2286922 2286975 . + . Parent=GSCOCT00024825001 | |
| 35210 chr10 manual_curation exon 2287067 2287206 . + . Parent=GSCOCT00024825001 | |
| 35211 chr10 manual_curation exon 2287479 2288037 . + . Parent=GSCOCT00024825001 | |
| 35212 chr10 manual_curation exon 2288125 2288239 . + . Parent=GSCOCT00024825001 | |
| 35213 chr10 manual_curation exon 2288385 2288434 . + . Parent=GSCOCT00024825001 | |
| 35214 chr10 manual_curation exon 2288818 2288961 . + . Parent=GSCOCT00024825001 | |
| 35215 chr10 manual_curation exon 2289162 2289597 . + . Parent=GSCOCT00024825001 | |
| 35216 chr10 manual_curation CDS 2285321 2285983 . + 0 Parent=GSCOCT00024825001 | |
| 35217 chr10 manual_curation CDS 2286115 2286169 . + 0 Parent=GSCOCT00024825001 | |
| 35218 chr10 manual_curation CDS 2286269 2286368 . + 1 Parent=GSCOCT00024825001 | |
| 35219 chr10 manual_curation CDS 2286466 2286697 . + 2 Parent=GSCOCT00024825001 | |
| 35220 chr10 manual_curation CDS 2286922 2286975 . + 0 Parent=GSCOCT00024825001 | |
| 35221 chr10 manual_curation CDS 2287067 2287206 . + 0 Parent=GSCOCT00024825001 | |
| 35222 chr10 manual_curation CDS 2287479 2288037 . + 2 Parent=GSCOCT00024825001 | |
| 35223 chr10 manual_curation CDS 2288125 2288239 . + 0 Parent=GSCOCT00024825001 | |
| 35224 chr10 manual_curation CDS 2288385 2288434 . + 1 Parent=GSCOCT00024825001 | |
| 35225 chr10 manual_curation CDS 2288818 2288961 . + 0 Parent=GSCOCT00024825001 | |
| 35226 chr10 manual_curation CDS 2289162 2289404 . + 0 Parent=GSCOCT00024825001 | |
| 35227 chr10 manual_curation gene 2291465 2301899 . + . ID=GSCOCG00024826001;Name=Cc10_g03070 | |
| 35228 chr10 manual_curation mRNA 2291465 2301899 . + . ID=GSCOCT00024826001;Parent=GSCOCG00024826001;Name=Cc10_g03070 | |
| 35229 chr10 manual_curation polypeptide 2291788 2301715 . + . ID=GSCOCP00024826001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q559T8,SwissProt:Q60592,SwissProt:Q6P0Q8,TAIR:AT1G45160.2,TAIR:AT3G17850.1,TAIR:AT5G62310.1,TrEMBL:B9R7R7,TrEMBL:F4HPN1,TrEMBL:F6H1H6;Derives_from=GSCOCT00024826001;Name=Cc10_g03070;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.13,PRODUCT:Protein kinase superfamily protein,CC_functional_completeness:complete,CC_gene:DDB_G0272282,CC_gene:Mast2,CC_gene:MAST2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024826001~ Protein kinase superfamily protein~ DDB_G0272282~ complete;original_location=join(2291788..2292019%2C2293518..2293609%2C2293706..2293891%2C2294007..2295254%2C2295597..2295769%2C2295860..2296103%2C2297170..2297262%2C2297577..2297717%2C2297813..2297905%2C2298377..2298569%2C2298684..2298769%2C2299190..2299278%2C2300028..2300079%2C2300200..2300256%2C2300544..2300687%2C2301288..2301365%2C2301617..2301715);owner=coffea | |
| 35230 chr10 manual_curation exon 2291465 2292019 . + . Parent=GSCOCT00024826001 | |
| 35231 chr10 manual_curation exon 2293518 2293609 . + . Parent=GSCOCT00024826001 | |
| 35232 chr10 manual_curation exon 2293706 2293891 . + . Parent=GSCOCT00024826001 | |
| 35233 chr10 manual_curation exon 2294007 2295254 . + . Parent=GSCOCT00024826001 | |
| 35234 chr10 manual_curation exon 2295597 2295769 . + . Parent=GSCOCT00024826001 | |
| 35235 chr10 manual_curation exon 2295860 2296103 . + . Parent=GSCOCT00024826001 | |
| 35236 chr10 manual_curation exon 2297170 2297262 . + . Parent=GSCOCT00024826001 | |
| 35237 chr10 manual_curation exon 2297577 2297717 . + . Parent=GSCOCT00024826001 | |
| 35238 chr10 manual_curation exon 2297813 2297905 . + . Parent=GSCOCT00024826001 | |
| 35239 chr10 manual_curation exon 2298377 2298569 . + . Parent=GSCOCT00024826001 | |
| 35240 chr10 manual_curation exon 2298684 2298769 . + . Parent=GSCOCT00024826001 | |
| 35241 chr10 manual_curation exon 2299190 2299278 . + . Parent=GSCOCT00024826001 | |
| 35242 chr10 manual_curation exon 2300028 2300079 . + . Parent=GSCOCT00024826001 | |
| 35243 chr10 manual_curation exon 2300200 2300256 . + . Parent=GSCOCT00024826001 | |
| 35244 chr10 manual_curation exon 2300544 2300687 . + . Parent=GSCOCT00024826001 | |
| 35245 chr10 manual_curation exon 2301288 2301365 . + . Parent=GSCOCT00024826001 | |
| 35246 chr10 manual_curation exon 2301617 2301899 . + . Parent=GSCOCT00024826001 | |
| 35247 chr10 manual_curation CDS 2291788 2292019 . + 0 Parent=GSCOCT00024826001 | |
| 35248 chr10 manual_curation CDS 2293518 2293609 . + 1 Parent=GSCOCT00024826001 | |
| 35249 chr10 manual_curation CDS 2293706 2293891 . + 0 Parent=GSCOCT00024826001 | |
| 35250 chr10 manual_curation CDS 2294007 2295254 . + 0 Parent=GSCOCT00024826001 | |
| 35251 chr10 manual_curation CDS 2295597 2295769 . + 0 Parent=GSCOCT00024826001 | |
| 35252 chr10 manual_curation CDS 2295860 2296103 . + 2 Parent=GSCOCT00024826001 | |
| 35253 chr10 manual_curation CDS 2297170 2297262 . + 0 Parent=GSCOCT00024826001 | |
| 35254 chr10 manual_curation CDS 2297577 2297717 . + 0 Parent=GSCOCT00024826001 | |
| 35255 chr10 manual_curation CDS 2297813 2297905 . + 0 Parent=GSCOCT00024826001 | |
| 35256 chr10 manual_curation CDS 2298377 2298569 . + 0 Parent=GSCOCT00024826001 | |
| 35257 chr10 manual_curation CDS 2298684 2298769 . + 1 Parent=GSCOCT00024826001 | |
| 35258 chr10 manual_curation CDS 2299190 2299278 . + 0 Parent=GSCOCT00024826001 | |
| 35259 chr10 manual_curation CDS 2300028 2300079 . + 2 Parent=GSCOCT00024826001 | |
| 35260 chr10 manual_curation CDS 2300200 2300256 . + 0 Parent=GSCOCT00024826001 | |
| 35261 chr10 manual_curation CDS 2300544 2300687 . + 0 Parent=GSCOCT00024826001 | |
| 35262 chr10 manual_curation CDS 2301288 2301365 . + 0 Parent=GSCOCT00024826001 | |
| 35263 chr10 manual_curation CDS 2301617 2301715 . + 0 Parent=GSCOCT00024826001 | |
| 35264 chr10 manual_curation gene 2302035 2307970 . - . ID=GSCOCG00024827001;Name=Cc10_g03080 | |
| 35265 chr10 manual_curation mRNA 2302035 2307970 . - . ID=GSCOCT00024827001;Parent=GSCOCG00024827001;Name=Cc10_g03080 | |
| 35266 chr10 manual_curation polypeptide 2302035 2307884 . - . ID=GSCOCP00024827001;Dbxref=GENE3D:G3DSA:1.10.10.10,InterPro:IPR000717,InterPro:IPR011991,PFAM:PF01399,SMART:SM00088,SwissProt:Q54B82,SwissProt:Q68FS2,SwissProt:Q8L5U0,TAIR:AT5G42970.1,TrEMBL:A9PB47,TrEMBL:B9IB60,TrEMBL:B9R7R6;Derives_from=GSCOCT00024827001;Name=Cc10_g03080;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:COP9 signalosome complex subunit 4,CC_functional_completeness:complete,CC_gene:CSN4,CC_gene:csn4,CC_gene:Cops4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024827001~ COP9 signalosome complex subunit 4~ CSN4~ complete;original_location=complement(join(2307755..2307884%2C2307491..2307642%2C2306490..2306593%2C2306336..2306396%2C2304901..2304993%2C2304717..2304817%2C2304352..2304460%2C2303480..2303524%2C2303237..2303305%2C2303048..2303139%2C2302874..2302916%2C2302452..2302511%2C2302238..2302297%2C2302035..2302109));owner=coffea | |
| 35267 chr10 manual_curation exon 2302035 2302109 . - . Parent=GSCOCT00024827001 | |
| 35268 chr10 manual_curation exon 2302238 2302297 . - . Parent=GSCOCT00024827001 | |
| 35269 chr10 manual_curation exon 2302452 2302511 . - . Parent=GSCOCT00024827001 | |
| 35270 chr10 manual_curation exon 2302874 2302916 . - . Parent=GSCOCT00024827001 | |
| 35271 chr10 manual_curation exon 2303048 2303139 . - . Parent=GSCOCT00024827001 | |
| 35272 chr10 manual_curation exon 2303237 2303305 . - . Parent=GSCOCT00024827001 | |
| 35273 chr10 manual_curation exon 2303480 2303524 . - . Parent=GSCOCT00024827001 | |
| 35274 chr10 manual_curation exon 2304352 2304460 . - . Parent=GSCOCT00024827001 | |
| 35275 chr10 manual_curation exon 2304717 2304817 . - . Parent=GSCOCT00024827001 | |
| 35276 chr10 manual_curation exon 2304901 2304993 . - . Parent=GSCOCT00024827001 | |
| 35277 chr10 manual_curation exon 2306336 2306396 . - . Parent=GSCOCT00024827001 | |
| 35278 chr10 manual_curation exon 2306490 2306593 . - . Parent=GSCOCT00024827001 | |
| 35279 chr10 manual_curation exon 2307491 2307642 . - . Parent=GSCOCT00024827001 | |
| 35280 chr10 manual_curation exon 2307755 2307970 . - . Parent=GSCOCT00024827001 | |
| 35281 chr10 manual_curation CDS 2302035 2302109 . - 0 Parent=GSCOCT00024827001 | |
| 35282 chr10 manual_curation CDS 2302238 2302297 . - 0 Parent=GSCOCT00024827001 | |
| 35283 chr10 manual_curation CDS 2302452 2302511 . - 0 Parent=GSCOCT00024827001 | |
| 35284 chr10 manual_curation CDS 2302874 2302916 . - 2 Parent=GSCOCT00024827001 | |
| 35285 chr10 manual_curation CDS 2303048 2303139 . - 0 Parent=GSCOCT00024827001 | |
| 35286 chr10 manual_curation CDS 2303237 2303305 . - 0 Parent=GSCOCT00024827001 | |
| 35287 chr10 manual_curation CDS 2303480 2303524 . - 0 Parent=GSCOCT00024827001 | |
| 35288 chr10 manual_curation CDS 2304352 2304460 . - 2 Parent=GSCOCT00024827001 | |
| 35289 chr10 manual_curation CDS 2304717 2304817 . - 0 Parent=GSCOCT00024827001 | |
| 35290 chr10 manual_curation CDS 2304901 2304993 . - 0 Parent=GSCOCT00024827001 | |
| 35291 chr10 manual_curation CDS 2306336 2306396 . - 2 Parent=GSCOCT00024827001 | |
| 35292 chr10 manual_curation CDS 2306490 2306593 . - 0 Parent=GSCOCT00024827001 | |
| 35293 chr10 manual_curation CDS 2307491 2307642 . - 1 Parent=GSCOCT00024827001 | |
| 35294 chr10 manual_curation CDS 2307755 2307884 . - 0 Parent=GSCOCT00024827001 | |
| 35295 chr10 manual_curation gene 2308275 2309932 . + . ID=GSCOCG00024828001;Name=Cc10_g03090 | |
| 35296 chr10 manual_curation mRNA 2308275 2309932 . + . ID=GSCOCT00024828001;Parent=GSCOCG00024828001;Name=Cc10_g03090 | |
| 35297 chr10 manual_curation polypeptide 2308275 2309932 . + . ID=GSCOCP00024828001;Dbxref=TAIR:AT1G06515.1,TAIR:AT2G30942.1,TrEMBL:A9PBI9,TrEMBL:A9PCE9,TrEMBL:D7LCA7;Derives_from=GSCOCT00024828001;Name=Cc10_g03090;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF3317),CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024828001~ Protein of unknown function (DUF3317)~ unknown_gene~ modules;original_location=join(2308275..2308343%2C2308457..2308573%2C2308697..2308766%2C2309238..2309333%2C2309856..2309932);owner=coffea | |
| 35298 chr10 manual_curation exon 2308275 2308343 . + . Parent=GSCOCT00024828001 | |
| 35299 chr10 manual_curation exon 2308457 2308573 . + . Parent=GSCOCT00024828001 | |
| 35300 chr10 manual_curation exon 2308697 2308766 . + . Parent=GSCOCT00024828001 | |
| 35301 chr10 manual_curation exon 2309238 2309333 . + . Parent=GSCOCT00024828001 | |
| 35302 chr10 manual_curation exon 2309856 2309932 . + . Parent=GSCOCT00024828001 | |
| 35303 chr10 manual_curation CDS 2308275 2308343 . + 0 Parent=GSCOCT00024828001 | |
| 35304 chr10 manual_curation CDS 2308457 2308573 . + 0 Parent=GSCOCT00024828001 | |
| 35305 chr10 manual_curation CDS 2308697 2308766 . + 0 Parent=GSCOCT00024828001 | |
| 35306 chr10 manual_curation CDS 2309238 2309333 . + 1 Parent=GSCOCT00024828001 | |
| 35307 chr10 manual_curation CDS 2309856 2309932 . + 1 Parent=GSCOCT00024828001 | |
| 35308 chr10 manual_curation gene 2312707 2321311 . + . ID=GSCOCG00024830001;Name=Cc10_g03100 | |
| 35309 chr10 manual_curation mRNA 2312707 2321311 . + . ID=GSCOCT00024830001;Parent=GSCOCG00024830001;Name=Cc10_g03100 | |
| 35310 chr10 manual_curation polypeptide 2312861 2321065 . + . ID=GSCOCP00024830001;Dbxref=TAIR:AT1G45150.1,TrEMBL:F6H1H4,TrEMBL:I1JTC6,TrEMBL:I1K7S9;Derives_from=GSCOCT00024830001;Name=Cc10_g03100;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B Has 219 Blast hits to 202 proteins in 78 species,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024830001~ unknown protein%3B Has 219 Blast hits to 202 proteins in 78 species: Archae - 0%3B Bacteria - 166%3B Metazoa - 0%3B Fungi - 0%3B Plants - 36%3B Viruses - 0%3B Other Eukaryotes - 17 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(2312861..2312873%2C2313652..2313863%2C2314329..2314465%2C2314554..2314664%2C2314775..2314876%2C2315047..2315155%2C2315238..2315438%2C2315912..2316080%2C2316305..2316386%2C2316479..2316572%2C2316839..2316935%2C2318391..2318484%2C2319274..2319346%2C2319745..2319918%2C2320013..2320135%2C2320904..2321065);owner=coffea | |
| 35311 chr10 manual_curation exon 2312707 2312873 . + . Parent=GSCOCT00024830001 | |
| 35312 chr10 manual_curation exon 2313652 2313863 . + . Parent=GSCOCT00024830001 | |
| 35313 chr10 manual_curation exon 2314329 2314465 . + . Parent=GSCOCT00024830001 | |
| 35314 chr10 manual_curation exon 2314554 2314664 . + . Parent=GSCOCT00024830001 | |
| 35315 chr10 manual_curation exon 2314775 2314876 . + . Parent=GSCOCT00024830001 | |
| 35316 chr10 manual_curation exon 2315047 2315155 . + . Parent=GSCOCT00024830001 | |
| 35317 chr10 manual_curation exon 2315238 2315438 . + . Parent=GSCOCT00024830001 | |
| 35318 chr10 manual_curation exon 2315912 2316080 . + . Parent=GSCOCT00024830001 | |
| 35319 chr10 manual_curation exon 2316305 2316386 . + . Parent=GSCOCT00024830001 | |
| 35320 chr10 manual_curation exon 2316479 2316572 . + . Parent=GSCOCT00024830001 | |
| 35321 chr10 manual_curation exon 2316839 2316935 . + . Parent=GSCOCT00024830001 | |
| 35322 chr10 manual_curation exon 2318391 2318484 . + . Parent=GSCOCT00024830001 | |
| 35323 chr10 manual_curation exon 2319274 2319346 . + . Parent=GSCOCT00024830001 | |
| 35324 chr10 manual_curation exon 2319745 2319918 . + . Parent=GSCOCT00024830001 | |
| 35325 chr10 manual_curation exon 2320013 2320135 . + . Parent=GSCOCT00024830001 | |
| 35326 chr10 manual_curation exon 2320904 2321311 . + . Parent=GSCOCT00024830001 | |
| 35327 chr10 manual_curation CDS 2312861 2312873 . + 0 Parent=GSCOCT00024830001 | |
| 35328 chr10 manual_curation CDS 2313652 2313863 . + 1 Parent=GSCOCT00024830001 | |
| 35329 chr10 manual_curation CDS 2314329 2314465 . + 0 Parent=GSCOCT00024830001 | |
| 35330 chr10 manual_curation CDS 2314554 2314664 . + 2 Parent=GSCOCT00024830001 | |
| 35331 chr10 manual_curation CDS 2314775 2314876 . + 2 Parent=GSCOCT00024830001 | |
| 35332 chr10 manual_curation CDS 2315047 2315155 . + 2 Parent=GSCOCT00024830001 | |
| 35333 chr10 manual_curation CDS 2315238 2315438 . + 0 Parent=GSCOCT00024830001 | |
| 35334 chr10 manual_curation CDS 2315912 2316080 . + 0 Parent=GSCOCT00024830001 | |
| 35335 chr10 manual_curation CDS 2316305 2316386 . + 1 Parent=GSCOCT00024830001 | |
| 35336 chr10 manual_curation CDS 2316479 2316572 . + 2 Parent=GSCOCT00024830001 | |
| 35337 chr10 manual_curation CDS 2316839 2316935 . + 0 Parent=GSCOCT00024830001 | |
| 35338 chr10 manual_curation CDS 2318391 2318484 . + 1 Parent=GSCOCT00024830001 | |
| 35339 chr10 manual_curation CDS 2319274 2319346 . + 2 Parent=GSCOCT00024830001 | |
| 35340 chr10 manual_curation CDS 2319745 2319918 . + 0 Parent=GSCOCT00024830001 | |
| 35341 chr10 manual_curation CDS 2320013 2320135 . + 0 Parent=GSCOCT00024830001 | |
| 35342 chr10 manual_curation CDS 2320904 2321065 . + 0 Parent=GSCOCT00024830001 | |
| 35343 chr10 manual_curation gene 2329855 2333406 . + . ID=GSCOCG00024832001;Name=Cc10_g03110 | |
| 35344 chr10 manual_curation mRNA 2329855 2333406 . + . ID=GSCOCT00024832001;Parent=GSCOCG00024832001;Name=Cc10_g03110 | |
| 35345 chr10 manual_curation polypeptide 2330402 2332935 . + . ID=GSCOCP00024832001;Dbxref=InterPro:IPR007087,InterPro:IPR015880,PROFILE:PS50157,PROSITE:PS00028,SMART:SM00355,SwissProt:Q700D2,SwissProt:Q9FFH3,SwissProt:Q9ZWA6,TAIR:AT1G03840.1,TAIR:AT3G50700.1,TAIR:AT5G66730.1,TrEMBL:B9MXR2,TrEMBL:E0CQ24,TrEMBL:F6GWY3;Derives_from=GSCOCT00024832001;Name=Cc10_g03110;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:C2H2-like zinc finger protein,CC_functional_completeness:complete,CC_gene:MGP,CC_gene:NUC,CC_gene:JKD;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024832001~ C2H2-like zinc finger protein~ MGP~ complete;original_location=join(2330402..2330516%2C2330659..2331055%2C2331165..2331382%2C2332052..2332935);owner=coffea | |
| 35346 chr10 manual_curation exon 2329855 2330516 . + . Parent=GSCOCT00024832001 | |
| 35347 chr10 manual_curation exon 2330659 2331055 . + . Parent=GSCOCT00024832001 | |
| 35348 chr10 manual_curation exon 2331165 2331382 . + . Parent=GSCOCT00024832001 | |
| 35349 chr10 manual_curation exon 2332052 2333406 . + . Parent=GSCOCT00024832001 | |
| 35350 chr10 manual_curation CDS 2330402 2330516 . + 0 Parent=GSCOCT00024832001 | |
| 35351 chr10 manual_curation CDS 2330659 2331055 . + 1 Parent=GSCOCT00024832001 | |
| 35352 chr10 manual_curation CDS 2331165 2331382 . + 2 Parent=GSCOCT00024832001 | |
| 35353 chr10 manual_curation CDS 2332052 2332935 . + 1 Parent=GSCOCT00024832001 | |
| 35354 chr10 manual_curation gene 2337788 2341912 . + . ID=GSCOCG00024833001;Name=Cc10_g03120 | |
| 35355 chr10 manual_curation mRNA 2337788 2341912 . + . ID=GSCOCT00024833001;Parent=GSCOCG00024833001;Name=Cc10_g03120 | |
| 35356 chr10 manual_curation polypeptide 2338786 2341527 . + . ID=GSCOCP00024833001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:B9X287,SwissProt:O48786,SwissProt:Q6Z6D6,TAIR:AT1G75130.1,TAIR:AT2G26710.1,TAIR:AT3G14610.1,TrEMBL:A5AD13,TrEMBL:B9MZU2,TrEMBL:F6H1H2;Derives_from=GSCOCT00024833001;Name=Cc10_g03120;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.3.3.9,PRODUCT:Putative Cytochrome P450 734A1,CC_functional_completeness:complete,CC_gene:CYP734A1,CC_gene:CYP734A6,CC_gene:CYP734A2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024833001~ Putative Cytochrome P450 734A1~ CYP734A1~ complete;original_location=join(2338786..2339277%2C2339657..2339901%2C2340345..2340708%2C2341108..2341527);owner=coffea | |
| 35357 chr10 manual_curation exon 2337788 2339277 . + . Parent=GSCOCT00024833001 | |
| 35358 chr10 manual_curation exon 2339657 2339901 . + . Parent=GSCOCT00024833001 | |
| 35359 chr10 manual_curation exon 2340345 2340708 . + . Parent=GSCOCT00024833001 | |
| 35360 chr10 manual_curation exon 2341108 2341912 . + . Parent=GSCOCT00024833001 | |
| 35361 chr10 manual_curation CDS 2338786 2339277 . + 0 Parent=GSCOCT00024833001 | |
| 35362 chr10 manual_curation CDS 2339657 2339901 . + 0 Parent=GSCOCT00024833001 | |
| 35363 chr10 manual_curation CDS 2340345 2340708 . + 2 Parent=GSCOCT00024833001 | |
| 35364 chr10 manual_curation CDS 2341108 2341527 . + 0 Parent=GSCOCT00024833001 | |
| 35365 chr10 manual_curation gene 2344538 2344897 . + . ID=GSCOCG00024834001;Name=Cc10_g03130 | |
| 35366 chr10 manual_curation mRNA 2344538 2344897 . + . ID=GSCOCT00024834001;Parent=GSCOCG00024834001;Name=Cc10_g03130 | |
| 35367 chr10 manual_curation polypeptide 2344538 2344897 . + . ID=GSCOCP00024834001;Dbxref=InterPro:IPR001128,PANTHER:PTHR19383,SUPERFAMILY:SSF48264,TAIR:AT1G75130.1,TrEMBL:A5AD11,TrEMBL:B9MZU2,TrEMBL:F6H1H2;Derives_from=GSCOCT00024834001;Name=Cc10_g03130;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,CC_EC_number:missing_EC_number,PRODUCT:Putative cytochrome P450%2C family 721%2C subfamily A%2C polypeptide 1,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024834001~ Putative cytochrome P450%2C family 721%2C subfamily A%2C polypeptide 1~ unknown_gene~ fragment;original_location=2344538..2344897;owner=coffea | |
| 35368 chr10 manual_curation exon 2344538 2344897 . + . Parent=GSCOCT00024834001 | |
| 35369 chr10 manual_curation CDS 2344538 2344897 . + 0 Parent=GSCOCT00024834001 | |
| 35370 chr10 manual_curation gene 2344974 2356733 . + . ID=GSCOCG00024835001;Name=Cc10_g03140 | |
| 35371 chr10 manual_curation mRNA 2344974 2356733 . + . ID=GSCOCT00024835001;Parent=GSCOCG00024835001;Name=Cc10_g03140 | |
| 35372 chr10 manual_curation polypeptide 2344974 2356525 . + . ID=GSCOCP00024835001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:B9X287,SwissProt:O48786,SwissProt:Q6Z6D6,TAIR:AT1G75130.1,TAIR:AT2G26710.1,TAIR:AT3G14690.1,TrEMBL:A5AD13,TrEMBL:F6H1H2,TrEMBL:F6H1H3;Derives_from=GSCOCT00024835001;Name=Cc10_g03140;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.3.3.9,PRODUCT:Putative Cytochrome P450 734A1,CC_functional_completeness:complete,CC_gene:CYP734A1,CC_gene:CYP734A6,CC_gene:CYP734A2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024835001~ Putative Cytochrome P450 734A1~ CYP734A1~ complete;original_location=join(2344974..2344994%2C2346198..2346656%2C2347464..2347559%2C2349160..2349404%2C2349684..2350020%2C2350519..2350542%2C2351018..2351402%2C2352870..2353126%2C2354294..2354538%2C2355360..2355696%2C2356106..2356525);owner=coffea | |
| 35373 chr10 manual_curation exon 2344974 2344994 . + . Parent=GSCOCT00024835001 | |
| 35374 chr10 manual_curation exon 2346198 2346656 . + . Parent=GSCOCT00024835001 | |
| 35375 chr10 manual_curation exon 2347464 2347559 . + . Parent=GSCOCT00024835001 | |
| 35376 chr10 manual_curation exon 2349160 2349404 . + . Parent=GSCOCT00024835001 | |
| 35377 chr10 manual_curation exon 2349684 2350020 . + . Parent=GSCOCT00024835001 | |
| 35378 chr10 manual_curation exon 2350519 2350542 . + . Parent=GSCOCT00024835001 | |
| 35379 chr10 manual_curation exon 2351018 2351402 . + . Parent=GSCOCT00024835001 | |
| 35380 chr10 manual_curation exon 2352870 2353126 . + . Parent=GSCOCT00024835001 | |
| 35381 chr10 manual_curation exon 2354294 2354538 . + . Parent=GSCOCT00024835001 | |
| 35382 chr10 manual_curation exon 2355360 2355696 . + . Parent=GSCOCT00024835001 | |
| 35383 chr10 manual_curation exon 2356106 2356733 . + . Parent=GSCOCT00024835001 | |
| 35384 chr10 manual_curation CDS 2344974 2344994 . + 0 Parent=GSCOCT00024835001 | |
| 35385 chr10 manual_curation CDS 2346198 2346656 . + 0 Parent=GSCOCT00024835001 | |
| 35386 chr10 manual_curation CDS 2347464 2347559 . + 0 Parent=GSCOCT00024835001 | |
| 35387 chr10 manual_curation CDS 2349160 2349404 . + 0 Parent=GSCOCT00024835001 | |
| 35388 chr10 manual_curation CDS 2349684 2350020 . + 2 Parent=GSCOCT00024835001 | |
| 35389 chr10 manual_curation CDS 2350519 2350542 . + 0 Parent=GSCOCT00024835001 | |
| 35390 chr10 manual_curation CDS 2351018 2351402 . + 0 Parent=GSCOCT00024835001 | |
| 35391 chr10 manual_curation CDS 2352870 2353126 . + 1 Parent=GSCOCT00024835001 | |
| 35392 chr10 manual_curation CDS 2354294 2354538 . + 0 Parent=GSCOCT00024835001 | |
| 35393 chr10 manual_curation CDS 2355360 2355696 . + 2 Parent=GSCOCT00024835001 | |
| 35394 chr10 manual_curation CDS 2356106 2356525 . + 0 Parent=GSCOCT00024835001 | |
| 35395 chr10 manual_curation gene 2356951 2359625 . + . ID=GSCOCG00024836001;Name=Cc10_g03150 | |
| 35396 chr10 manual_curation mRNA 2356951 2359625 . + . ID=GSCOCT00024836001;Parent=GSCOCG00024836001;Name=Cc10_g03150 | |
| 35397 chr10 manual_curation polypeptide 2356951 2359625 . + . ID=GSCOCP00024836001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,SUPERFAMILY:SSF48264,SwissProt:B9X287,SwissProt:O48786,SwissProt:Q6Z6D6,TAIR:AT1G75130.1,TAIR:AT2G26710.1,TAIR:AT2G46950.1,TrEMBL:B9IB58,TrEMBL:B9MZU2,TrEMBL:F6H1G9;Derives_from=GSCOCT00024836001;Name=Cc10_g03150;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.3.3.9,PRODUCT:Putative Cytochrome P450 734A1,CC_functional_completeness:complete,CC_gene:CYP734A1,CC_gene:CYP734A6,CC_gene:CYP734A2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024836001~ Putative Cytochrome P450 734A1~ CYP734A1~ complete;original_location=join(2356951..2357436%2C2358043..2358287%2C2358644..2359007%2C2359386..2359625);owner=coffea | |
| 35398 chr10 manual_curation exon 2356951 2357436 . + . Parent=GSCOCT00024836001 | |
| 35399 chr10 manual_curation exon 2358043 2358287 . + . Parent=GSCOCT00024836001 | |
| 35400 chr10 manual_curation exon 2358644 2359007 . + . Parent=GSCOCT00024836001 | |
| 35401 chr10 manual_curation exon 2359386 2359625 . + . Parent=GSCOCT00024836001 | |
| 35402 chr10 manual_curation CDS 2356951 2357436 . + 0 Parent=GSCOCT00024836001 | |
| 35403 chr10 manual_curation CDS 2358043 2358287 . + 0 Parent=GSCOCT00024836001 | |
| 35404 chr10 manual_curation CDS 2358644 2359007 . + 2 Parent=GSCOCT00024836001 | |
| 35405 chr10 manual_curation CDS 2359386 2359625 . + 0 Parent=GSCOCT00024836001 | |
| 35406 chr10 manual_curation gene 2362626 2367803 . + . ID=GSCOCG00024838001;Name=Cc10_g03160 | |
| 35407 chr10 manual_curation mRNA 2362626 2367803 . + . ID=GSCOCT00024838001;Parent=GSCOCG00024838001;Name=Cc10_g03160 | |
| 35408 chr10 manual_curation polypeptide 2363760 2366990 . + . ID=GSCOCP00024838001;Dbxref=GENE3D:G3DSA:3.60.40.10,InterPro:IPR001932,InterPro:IPR010822,PFAM:PF07228,SMART:SM00331,SMART:SM00332,SUPERFAMILY:SSF81606,SwissProt:Q93V88,SwissProt:Q9LVQ8,SwissProt:Q9SUK9,TAIR:AT4G16580.1,TAIR:AT4G33500.1,TAIR:AT5G66720.1,TrEMBL:B9R7R1,TrEMBL:F6H1G8,TrEMBL:I1M8F1;Derives_from=GSCOCT00024838001;Name=Cc10_g03160;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004721,CC_EC_number:missing_EC_number,PRODUCT:Probable protein phosphatase 2C 55,CC_functional_completeness:complete,CC_gene:At4g16580,CC_gene:At5g66720,CC_gene:At4g33500;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024838001~ Probable protein phosphatase 2C 55~ At4g16580~ complete;original_location=join(2363760..2364505%2C2364858..2365182%2C2365380..2365529%2C2366144..2366434%2C2366961..2366990);owner=coffea | |
| 35409 chr10 manual_curation exon 2362626 2362971 . + . Parent=GSCOCT00024838001 | |
| 35410 chr10 manual_curation exon 2363615 2364505 . + . Parent=GSCOCT00024838001 | |
| 35411 chr10 manual_curation exon 2364858 2365182 . + . Parent=GSCOCT00024838001 | |
| 35412 chr10 manual_curation exon 2365380 2365529 . + . Parent=GSCOCT00024838001 | |
| 35413 chr10 manual_curation exon 2366144 2366434 . + . Parent=GSCOCT00024838001 | |
| 35414 chr10 manual_curation exon 2366961 2367803 . + . Parent=GSCOCT00024838001 | |
| 35415 chr10 manual_curation CDS 2363760 2364505 . + 0 Parent=GSCOCT00024838001 | |
| 35416 chr10 manual_curation CDS 2364858 2365182 . + 2 Parent=GSCOCT00024838001 | |
| 35417 chr10 manual_curation CDS 2365380 2365529 . + 0 Parent=GSCOCT00024838001 | |
| 35418 chr10 manual_curation CDS 2366144 2366434 . + 0 Parent=GSCOCT00024838001 | |
| 35419 chr10 manual_curation CDS 2366961 2366990 . + 0 Parent=GSCOCT00024838001 | |
| 35420 chr10 manual_curation gene 2368558 2370991 . + . ID=GSCOCG00024839001;Name=Cc10_g03170 | |
| 35421 chr10 manual_curation mRNA 2368558 2370991 . + . ID=GSCOCT00024839001;Parent=GSCOCG00024839001;Name=Cc10_g03170 | |
| 35422 chr10 manual_curation polypeptide 2368888 2370723 . + . ID=GSCOCP00024839001;Dbxref=InterPro:IPR003388,InterPro:IPR005069,PANTHER:PTHR10994,PFAM:PF03407,TAIR:AT1G19360.1,TAIR:AT1G75110.1,TAIR:AT1G75120.1,TrEMBL:B9MVD4,TrEMBL:B9R7R0,TrEMBL:F6H1G6;Derives_from=GSCOCT00024839001;Name=Cc10_g03170;Ontology_term=CC_evidence_code:ISS,GO:0005783,CC_EC_number:missing_EC_number,PRODUCT:Nucleotide-diphospho-sugar transferase family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024839001~ Nucleotide-diphospho-sugar transferase family protein~ unknown_gene~ complete;original_location=join(2368888..2369061%2C2369605..2370723);owner=coffea | |
| 35423 chr10 manual_curation exon 2368558 2369061 . + . Parent=GSCOCT00024839001 | |
| 35424 chr10 manual_curation exon 2369605 2370991 . + . Parent=GSCOCT00024839001 | |
| 35425 chr10 manual_curation CDS 2368888 2369061 . + 0 Parent=GSCOCT00024839001 | |
| 35426 chr10 manual_curation CDS 2369605 2370723 . + 0 Parent=GSCOCT00024839001 | |
| 35427 chr10 manual_curation gene 2371729 2372040 . - . ID=GSCOCG00024840001;Name=Cc10_g03180 | |
| 35428 chr10 manual_curation mRNA 2371729 2372040 . - . ID=GSCOCT00024840001;Parent=GSCOCG00024840001;Name=Cc10_g03180 | |
| 35429 chr10 manual_curation polypeptide 2371729 2372040 . - . ID=GSCOCP00024840001;Dbxref=InterPro:IPR000626,InterPro:IPR019955,PFAM:PF00240,PROFILE:PS50053,SMART:SM00213,TrEMBL:B9HHE8,TrEMBL:B9MXY1,TrEMBL:B9SMM1;Derives_from=GSCOCT00024840001;Name=Cc10_g03180;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024840001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=complement(2371729..2372040);owner=coffea | |
| 35430 chr10 manual_curation exon 2371729 2372040 . - . Parent=GSCOCT00024840001 | |
| 35431 chr10 manual_curation CDS 2371729 2372040 . - 0 Parent=GSCOCT00024840001 | |
| 35432 chr10 manual_curation gene 2373376 2375133 . - . ID=GSCOCG00024841001;Name=Cc10_g03190 | |
| 35433 chr10 manual_curation mRNA 2373376 2375133 . - . ID=GSCOCT00024841001;Parent=GSCOCG00024841001;Name=Cc10_g03190 | |
| 35434 chr10 manual_curation polypeptide 2373376 2374923 . - . ID=GSCOCP00024841001;Dbxref=InterPro:IPR008512,PFAM:PF05634,SwissProt:Q8W4A5,SwissProt:Q9LSZ0,SwissProt:Q9XIR4,TAIR:AT1G64810.2,TAIR:AT3G21740.1,TAIR:AT5G57930.2,TrEMBL:B9SMM2,TrEMBL:F6HIK2,TrEMBL:I1M428;Derives_from=GSCOCT00024841001;Name=Cc10_g03190;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:APO protein 4%2C mitochondrial,CC_functional_completeness:complete,CC_gene:APO4,CC_gene:APO1,CC_gene:APO2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024841001~ APO protein 4%2C mitochondrial~ APO4~ complete;original_location=complement(join(2374658..2374923%2C2373376..2374099));owner=coffea | |
| 35435 chr10 manual_curation exon 2373376 2374099 . - . Parent=GSCOCT00024841001 | |
| 35436 chr10 manual_curation exon 2374658 2375133 . - . Parent=GSCOCT00024841001 | |
| 35437 chr10 manual_curation CDS 2373376 2374099 . - 2 Parent=GSCOCT00024841001 | |
| 35438 chr10 manual_curation CDS 2374658 2374923 . - 0 Parent=GSCOCT00024841001 | |
| 35439 chr10 manual_curation gene 2377203 2385361 . + . ID=GSCOCG00024842001;Name=Cc10_g03200 | |
| 35440 chr10 manual_curation mRNA 2377203 2385361 . + . ID=GSCOCT00024842001;Parent=GSCOCG00024842001;Name=Cc10_g03200 | |
| 35441 chr10 manual_curation polypeptide 2378421 2384845 . + . ID=GSCOCP00024842001;Dbxref=InterPro:IPR004342,PFAM:PF03124,PROFILE:PS51380,SwissProt:Q54G02,SwissProt:Q54MJ9,SwissProt:Q55B06,TAIR:AT2G32295.1,TAIR:AT3G29060.1,TAIR:AT5G35730.1,TrEMBL:D7TEP2,TrEMBL:I1LU80,TrEMBL:I1M421;Derives_from=GSCOCT00024842001;Name=Cc10_g03200;Ontology_term=CC_evidence_code:ISS,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Putative SPX and EXS domain-containing protein 5,CC_functional_completeness:fragment,CC_gene:DDB_G0271664,CC_gene:DDB_G0290647,CC_gene:xpr1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024842001~ Putative SPX and EXS domain-containing protein 5~ DDB_G0271664~ fragment;original_location=join(2378421..2378502%2C2378608..2378741%2C2379272..2379310%2C2379441..2379533%2C2379651..2379767%2C2380096..2380191%2C2380593..2380710%2C2380915..2381051%2C2381223..2381276%2C2381793..2381840%2C2382717..2382867%2C2383562..2383727%2C2384118..2384187%2C2384588..2384845);owner=coffea | |
| 35442 chr10 manual_curation exon 2377203 2377474 . + . Parent=GSCOCT00024842001 | |
| 35443 chr10 manual_curation exon 2378362 2378502 . + . Parent=GSCOCT00024842001 | |
| 35444 chr10 manual_curation exon 2378608 2378741 . + . Parent=GSCOCT00024842001 | |
| 35445 chr10 manual_curation exon 2379272 2379310 . + . Parent=GSCOCT00024842001 | |
| 35446 chr10 manual_curation exon 2379441 2379533 . + . Parent=GSCOCT00024842001 | |
| 35447 chr10 manual_curation exon 2379651 2379767 . + . Parent=GSCOCT00024842001 | |
| 35448 chr10 manual_curation exon 2380096 2380191 . + . Parent=GSCOCT00024842001 | |
| 35449 chr10 manual_curation exon 2380593 2380710 . + . Parent=GSCOCT00024842001 | |
| 35450 chr10 manual_curation exon 2380915 2381051 . + . Parent=GSCOCT00024842001 | |
| 35451 chr10 manual_curation exon 2381223 2381276 . + . Parent=GSCOCT00024842001 | |
| 35452 chr10 manual_curation exon 2381793 2381840 . + . Parent=GSCOCT00024842001 | |
| 35453 chr10 manual_curation exon 2382717 2382867 . + . Parent=GSCOCT00024842001 | |
| 35454 chr10 manual_curation exon 2383562 2383727 . + . Parent=GSCOCT00024842001 | |
| 35455 chr10 manual_curation exon 2384118 2384187 . + . Parent=GSCOCT00024842001 | |
| 35456 chr10 manual_curation exon 2384588 2385361 . + . Parent=GSCOCT00024842001 | |
| 35457 chr10 manual_curation CDS 2378421 2378502 . + 0 Parent=GSCOCT00024842001 | |
| 35458 chr10 manual_curation CDS 2378608 2378741 . + 1 Parent=GSCOCT00024842001 | |
| 35459 chr10 manual_curation CDS 2379272 2379310 . + 0 Parent=GSCOCT00024842001 | |
| 35460 chr10 manual_curation CDS 2379441 2379533 . + 0 Parent=GSCOCT00024842001 | |
| 35461 chr10 manual_curation CDS 2379651 2379767 . + 0 Parent=GSCOCT00024842001 | |
| 35462 chr10 manual_curation CDS 2380096 2380191 . + 0 Parent=GSCOCT00024842001 | |
| 35463 chr10 manual_curation CDS 2380593 2380710 . + 0 Parent=GSCOCT00024842001 | |
| 35464 chr10 manual_curation CDS 2380915 2381051 . + 1 Parent=GSCOCT00024842001 | |
| 35465 chr10 manual_curation CDS 2381223 2381276 . + 0 Parent=GSCOCT00024842001 | |
| 35466 chr10 manual_curation CDS 2381793 2381840 . + 0 Parent=GSCOCT00024842001 | |
| 35467 chr10 manual_curation CDS 2382717 2382867 . + 0 Parent=GSCOCT00024842001 | |
| 35468 chr10 manual_curation CDS 2383562 2383727 . + 1 Parent=GSCOCT00024842001 | |
| 35469 chr10 manual_curation CDS 2384118 2384187 . + 2 Parent=GSCOCT00024842001 | |
| 35470 chr10 manual_curation CDS 2384588 2384845 . + 0 Parent=GSCOCT00024842001 | |
| 35471 chr10 manual_curation gene 2386247 2391769 . + . ID=GSCOCG00024843001;Name=Cc10_g03210 | |
| 35472 chr10 manual_curation mRNA 2386247 2391769 . + . ID=GSCOCT00024843001;Parent=GSCOCG00024843001;Name=Cc10_g03210 | |
| 35473 chr10 manual_curation polypeptide 2386668 2391444 . + . ID=GSCOCP00024843001;Dbxref=GENE3D:G3DSA:1.10.287.110,InterPro:IPR001623,PFAM:PF00226,SUPERFAMILY:SSF46565,SwissProt:O13773,SwissProt:Q0WQ57,SwissProt:Q9SU08,TAIR:AT1G75100.1,TAIR:AT4G12770.1,TAIR:AT4G36520.1,TrEMBL:B9MVD5,TrEMBL:B9R7Q9,TrEMBL:E0CQ12;Derives_from=GSCOCT00024843001;Name=Cc10_g03210;Ontology_term=CC_evidence_code:ISS,GO:0031072,CC_EC_number:missing_EC_number,PRODUCT:Putative J-domain protein required for chloroplast accumulation response 1,CC_functional_completeness:complete,CC_gene:At4g12770,CC_gene:At4g12780,CC_gene:ucp7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024843001~ Putative J-domain protein required for chloroplast accumulation response 1~ At4g12770~ complete;original_location=join(2386668..2386996%2C2387054..2387116%2C2387852..2388684%2C2388775..2389142%2C2389255..2389366%2C2389515..2389573%2C2389841..2389906%2C2389981..2390058%2C2390815..2390991%2C2391406..2391444);owner=coffea | |
| 35474 chr10 manual_curation exon 2386247 2386996 . + . Parent=GSCOCT00024843001 | |
| 35475 chr10 manual_curation exon 2387054 2387116 . + . Parent=GSCOCT00024843001 | |
| 35476 chr10 manual_curation exon 2387852 2388684 . + . Parent=GSCOCT00024843001 | |
| 35477 chr10 manual_curation exon 2388775 2389142 . + . Parent=GSCOCT00024843001 | |
| 35478 chr10 manual_curation exon 2389255 2389366 . + . Parent=GSCOCT00024843001 | |
| 35479 chr10 manual_curation exon 2389515 2389573 . + . Parent=GSCOCT00024843001 | |
| 35480 chr10 manual_curation exon 2389841 2389906 . + . Parent=GSCOCT00024843001 | |
| 35481 chr10 manual_curation exon 2389981 2390058 . + . Parent=GSCOCT00024843001 | |
| 35482 chr10 manual_curation exon 2390815 2390991 . + . Parent=GSCOCT00024843001 | |
| 35483 chr10 manual_curation exon 2391406 2391769 . + . Parent=GSCOCT00024843001 | |
| 35484 chr10 manual_curation CDS 2386668 2386996 . + 0 Parent=GSCOCT00024843001 | |
| 35485 chr10 manual_curation CDS 2387054 2387116 . + 2 Parent=GSCOCT00024843001 | |
| 35486 chr10 manual_curation CDS 2387852 2388684 . + 2 Parent=GSCOCT00024843001 | |
| 35487 chr10 manual_curation CDS 2388775 2389142 . + 1 Parent=GSCOCT00024843001 | |
| 35488 chr10 manual_curation CDS 2389255 2389366 . + 0 Parent=GSCOCT00024843001 | |
| 35489 chr10 manual_curation CDS 2389515 2389573 . + 1 Parent=GSCOCT00024843001 | |
| 35490 chr10 manual_curation CDS 2389841 2389906 . + 0 Parent=GSCOCT00024843001 | |
| 35491 chr10 manual_curation CDS 2389981 2390058 . + 0 Parent=GSCOCT00024843001 | |
| 35492 chr10 manual_curation CDS 2390815 2390991 . + 0 Parent=GSCOCT00024843001 | |
| 35493 chr10 manual_curation CDS 2391406 2391444 . + 0 Parent=GSCOCT00024843001 | |
| 35494 chr10 manual_curation gene 2392292 2395006 . + . ID=GSCOCG00024844001;Name=Cc10_g03220 | |
| 35495 chr10 manual_curation mRNA 2392292 2395006 . + . ID=GSCOCT00024844001;Parent=GSCOCG00024844001;Name=Cc10_g03220 | |
| 35496 chr10 manual_curation polypeptide 2392764 2394665 . + . ID=GSCOCP00024844001;Dbxref=InterPro:IPR003435,PFAM:PF02341,TAIR:AT5G19855.1,TrEMBL:B9GF05,TrEMBL:C6T2W6,TrEMBL:F6GU42;Derives_from=GSCOCT00024844001;Name=Cc10_g03220;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Chaperonin-like RbcX protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024844001~ Chaperonin-like RbcX protein~ unknown_gene~ complete;original_location=join(2392764..2393072%2C2393754..2393845%2C2394203..2394260%2C2394357..2394422%2C2394543..2394665);owner=coffea | |
| 35497 chr10 manual_curation exon 2392292 2393072 . + . Parent=GSCOCT00024844001 | |
| 35498 chr10 manual_curation exon 2393754 2393845 . + . Parent=GSCOCT00024844001 | |
| 35499 chr10 manual_curation exon 2394203 2394260 . + . Parent=GSCOCT00024844001 | |
| 35500 chr10 manual_curation exon 2394357 2394422 . + . Parent=GSCOCT00024844001 | |
| 35501 chr10 manual_curation exon 2394543 2395006 . + . Parent=GSCOCT00024844001 | |
| 35502 chr10 manual_curation CDS 2392764 2393072 . + 0 Parent=GSCOCT00024844001 | |
| 35503 chr10 manual_curation CDS 2393754 2393845 . + 0 Parent=GSCOCT00024844001 | |
| 35504 chr10 manual_curation CDS 2394203 2394260 . + 2 Parent=GSCOCT00024844001 | |
| 35505 chr10 manual_curation CDS 2394357 2394422 . + 0 Parent=GSCOCT00024844001 | |
| 35506 chr10 manual_curation CDS 2394543 2394665 . + 0 Parent=GSCOCT00024844001 | |
| 35507 chr10 manual_curation gene 2398036 2402685 . + . ID=GSCOCG00024846001;Name=Cc10_g03230 | |
| 35508 chr10 manual_curation mRNA 2398036 2402685 . + . ID=GSCOCT00024846001;Parent=GSCOCG00024846001;Name=Cc10_g03230 | |
| 35509 chr10 manual_curation polypeptide 2400649 2402423 . + . ID=GSCOCP00024846001;Dbxref=InterPro:IPR008580,PFAM:PF05903,SwissProt:Q5PQ09,SwissProt:Q6DC39,SwissProt:Q93VG8,TAIR:AT1G47740.1,TAIR:AT2G25190.1,TAIR:AT5G25170.1,TrEMBL:C6TMS7,TrEMBL:E0CQ11,TrEMBL:I1MXV1;Derives_from=GSCOCT00024846001;Name=Cc10_g03230;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:PPPDE putative thiol peptidase family protein,CC_functional_completeness:complete,CC_gene:At4g17486,CC_gene:pppde1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024846001~ PPPDE putative thiol peptidase family protein~ At4g17486~ complete;original_location=join(2400649..2400859%2C2401395..2401682%2C2402179..2402423);owner=coffea | |
| 35510 chr10 manual_curation exon 2398036 2398135 . + . Parent=GSCOCT00024846001 | |
| 35511 chr10 manual_curation exon 2400596 2400859 . + . Parent=GSCOCT00024846001 | |
| 35512 chr10 manual_curation exon 2401395 2401682 . + . Parent=GSCOCT00024846001 | |
| 35513 chr10 manual_curation exon 2402179 2402685 . + . Parent=GSCOCT00024846001 | |
| 35514 chr10 manual_curation CDS 2400649 2400859 . + 0 Parent=GSCOCT00024846001 | |
| 35515 chr10 manual_curation CDS 2401395 2401682 . + 1 Parent=GSCOCT00024846001 | |
| 35516 chr10 manual_curation CDS 2402179 2402423 . + 1 Parent=GSCOCT00024846001 | |
| 35517 chr10 manual_curation gene 2403878 2410936 . - . ID=GSCOCG00024847001;Name=Cc10_g03240 | |
| 35518 chr10 manual_curation mRNA 2403878 2410936 . - . ID=GSCOCT00024847001;Parent=GSCOCG00024847001;Name=Cc10_g03240 | |
| 35519 chr10 manual_curation polypeptide 2405060 2410481 . - . ID=GSCOCP00024847001;Dbxref=InterPro:IPR002123,PFAM:PF01553,SMART:SM00563,SwissProt:Q0KHU5,SwissProt:Q1LWG4,SwissProt:Q8NF37,TAIR:AT1G80950.1,TAIR:AT2G45670.1,TrEMBL:B9GP34,TrEMBL:B9MVD8,TrEMBL:I1JTC9;Derives_from=GSCOCT00024847001;Name=Cc10_g03240;Ontology_term=CC_evidence_code:ISS,GO:0008152,GO:0008415,CC_EC_number:2.3.1.51,PRODUCT:Phospholipid/glycerol acyltransferase family protein,CC_functional_completeness:complete,CC_gene:CG32699,CC_gene:lpcat1,CC_gene:LPCAT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024847001~ Phospholipid/glycerol acyltransferase family protein~ CG32699~ complete;original_location=complement(join(2409933..2410481%2C2408494..2408613%2C2408330..2408367%2C2407784..2407848%2C2407397..2407465%2C2406296..2406429%2C2405723..2405863%2C2405060..2405167));owner=coffea | |
| 35520 chr10 manual_curation exon 2403878 2405167 . - . Parent=GSCOCT00024847001 | |
| 35521 chr10 manual_curation exon 2405723 2405863 . - . Parent=GSCOCT00024847001 | |
| 35522 chr10 manual_curation exon 2406296 2406429 . - . Parent=GSCOCT00024847001 | |
| 35523 chr10 manual_curation exon 2407397 2407465 . - . Parent=GSCOCT00024847001 | |
| 35524 chr10 manual_curation exon 2407784 2407848 . - . Parent=GSCOCT00024847001 | |
| 35525 chr10 manual_curation exon 2408330 2408367 . - . Parent=GSCOCT00024847001 | |
| 35526 chr10 manual_curation exon 2408494 2408613 . - . Parent=GSCOCT00024847001 | |
| 35527 chr10 manual_curation exon 2409933 2410936 . - . Parent=GSCOCT00024847001 | |
| 35528 chr10 manual_curation CDS 2405060 2405167 . - 0 Parent=GSCOCT00024847001 | |
| 35529 chr10 manual_curation CDS 2405723 2405863 . - 0 Parent=GSCOCT00024847001 | |
| 35530 chr10 manual_curation CDS 2406296 2406429 . - 1 Parent=GSCOCT00024847001 | |
| 35531 chr10 manual_curation CDS 2407397 2407465 . - 1 Parent=GSCOCT00024847001 | |
| 35532 chr10 manual_curation CDS 2407784 2407848 . - 2 Parent=GSCOCT00024847001 | |
| 35533 chr10 manual_curation CDS 2408330 2408367 . - 0 Parent=GSCOCT00024847001 | |
| 35534 chr10 manual_curation CDS 2408494 2408613 . - 0 Parent=GSCOCT00024847001 | |
| 35535 chr10 manual_curation CDS 2409933 2410481 . - 0 Parent=GSCOCT00024847001 | |
| 35536 chr10 manual_curation gene 2412547 2413305 . - . ID=GSCOCG00024848001;Name=Cc10_g03250 | |
| 35537 chr10 manual_curation mRNA 2412547 2413305 . - . ID=GSCOCT00024848001;Parent=GSCOCG00024848001;Name=Cc10_g03250 | |
| 35538 chr10 manual_curation polypeptide 2412547 2413305 . - . ID=GSCOCP00024848001;Dbxref=InterPro:IPR008733,PANTHER:PTHR12652,SwissProt:A2XFQ8,SwissProt:Q10MN2,SwissProt:Q9FZF1,TAIR:AT1G47750.1,TAIR:AT3G47430.1,TrEMBL:B9MVD9,TrEMBL:E0CQ08,TrEMBL:F6H1G3;Derives_from=GSCOCT00024848001;Name=Cc10_g03250;Ontology_term=CC_evidence_code:ISS,GO:0005778,GO:0016559,CC_EC_number:missing_EC_number,PRODUCT:Peroxisomal membrane protein 11A,CC_functional_completeness:complete,CC_gene:PEX11A,CC_gene:PEX11-3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024848001~ Peroxisomal membrane protein 11A~ PEX11A~ complete;original_location=complement(2412547..2413305);owner=coffea | |
| 35539 chr10 manual_curation exon 2412547 2413305 . - . Parent=GSCOCT00024848001 | |
| 35540 chr10 manual_curation CDS 2412547 2413305 . - 0 Parent=GSCOCT00024848001 | |
| 35541 chr10 manual_curation gene 2414685 2419285 . + . ID=GSCOCG00024849001;Name=Cc10_g03260 | |
| 35542 chr10 manual_curation mRNA 2414685 2419285 . + . ID=GSCOCT00024849001;Parent=GSCOCG00024849001;Name=Cc10_g03260 | |
| 35543 chr10 manual_curation polypeptide 2415608 2418942 . + . ID=GSCOCP00024849001;Derives_from=GSCOCT00024849001;Name=Cc10_g03260;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024849001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(2415608..2415648%2C2417683..2417719%2C2418173..2418308%2C2418935..2418942);owner=coffea | |
| 35544 chr10 manual_curation exon 2414685 2415648 . + . Parent=GSCOCT00024849001 | |
| 35545 chr10 manual_curation exon 2417683 2417719 . + . Parent=GSCOCT00024849001 | |
| 35546 chr10 manual_curation exon 2418173 2418308 . + . Parent=GSCOCT00024849001 | |
| 35547 chr10 manual_curation exon 2418935 2419285 . + . Parent=GSCOCT00024849001 | |
| 35548 chr10 manual_curation CDS 2415608 2415648 . + 0 Parent=GSCOCT00024849001 | |
| 35549 chr10 manual_curation CDS 2417683 2417719 . + 2 Parent=GSCOCT00024849001 | |
| 35550 chr10 manual_curation CDS 2418173 2418308 . + 0 Parent=GSCOCT00024849001 | |
| 35551 chr10 manual_curation CDS 2418935 2418942 . + 1 Parent=GSCOCT00024849001 | |
| 35552 chr10 manual_curation gene 2422514 2423941 . - . ID=GSCOCG00024850001;Name=Cc10_g03270 | |
| 35553 chr10 manual_curation mRNA 2422514 2423941 . - . ID=GSCOCT00024850001;Parent=GSCOCG00024850001;Name=Cc10_g03270 | |
| 35554 chr10 manual_curation polypeptide 2422514 2423941 . - . ID=GSCOCP00024850001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,PROSITE:PS00375,SwissProt:Q40287,SwissProt:Q94A84,SwissProt:Q9AR73,TAIR:AT3G50740.1,TAIR:AT4G01070.1,TAIR:AT5G26310.1,TrEMBL:B9MVE1,TrEMBL:E0CQ07,TrEMBL:I1K4M2;Derives_from=GSCOCT00024850001;Name=Cc10_g03270;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.218,PRODUCT:Putative Anthocyanidin 3-O-glucosyltransferase 5,CC_functional_completeness:complete,CC_gene:GT5,CC_gene:AS,CC_gene:UGT72E1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024850001~ Putative Anthocyanidin 3-O-glucosyltransferase 5~ GT5~ complete;original_location=complement(2422514..2423941);owner=coffea | |
| 35555 chr10 manual_curation exon 2422514 2423941 . - . Parent=GSCOCT00024850001 | |
| 35556 chr10 manual_curation CDS 2422514 2423941 . - 0 Parent=GSCOCT00024850001 | |
| 35557 chr10 manual_curation gene 2431298 2434578 . + . ID=GSCOCG00024851001;Name=Cc10_g03280 | |
| 35558 chr10 manual_curation mRNA 2431298 2434578 . + . ID=GSCOCT00024851001;Parent=GSCOCG00024851001;Name=Cc10_g03280 | |
| 35559 chr10 manual_curation polypeptide 2431549 2434106 . + . ID=GSCOCP00024851001;Dbxref=InterPro:IPR005019,InterPro:IPR011257,PFAM:PF03352,SUPERFAMILY:SSF48150,SwissProt:P05100,SwissProt:P44321,SwissProt:Q7VG78,TAIR:AT1G75090.1,TAIR:AT1G80850.1,TAIR:AT5G57970.1,TrEMBL:A5BIS5,TrEMBL:B9R7Q5,TrEMBL:F6H1G2;Derives_from=GSCOCT00024851001;Name=Cc10_g03280;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0006281,GO:0006284,GO:0008725,CC_EC_number:3.2.2.20,PRODUCT:Putative DNA-3-methyladenine glycosylase 1,CC_functional_completeness:modules,CC_gene:guaA,CC_gene:tag;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024851001~ Putative DNA-3-methyladenine glycosylase 1~ guaA~ modules;original_location=join(2431549..2431966%2C2433014..2433155%2C2433275..2433416%2C2433807..2434106);owner=coffea | |
| 35560 chr10 manual_curation exon 2431298 2431966 . + . Parent=GSCOCT00024851001 | |
| 35561 chr10 manual_curation exon 2433014 2433155 . + . Parent=GSCOCT00024851001 | |
| 35562 chr10 manual_curation exon 2433275 2433416 . + . Parent=GSCOCT00024851001 | |
| 35563 chr10 manual_curation exon 2433807 2434578 . + . Parent=GSCOCT00024851001 | |
| 35564 chr10 manual_curation CDS 2431549 2431966 . + 0 Parent=GSCOCT00024851001 | |
| 35565 chr10 manual_curation CDS 2433014 2433155 . + 1 Parent=GSCOCT00024851001 | |
| 35566 chr10 manual_curation CDS 2433275 2433416 . + 2 Parent=GSCOCT00024851001 | |
| 35567 chr10 manual_curation CDS 2433807 2434106 . + 0 Parent=GSCOCT00024851001 | |
| 35568 chr10 manual_curation gene 2435139 2437729 . - . ID=GSCOCG00024852001;Name=Cc10_g03290 | |
| 35569 chr10 manual_curation mRNA 2435139 2437729 . - . ID=GSCOCT00024852001;Parent=GSCOCG00024852001;Name=Cc10_g03290 | |
| 35570 chr10 manual_curation polypeptide 2435516 2437296 . - . ID=GSCOCP00024852001;Dbxref=InterPro:IPR008540,PFAM:PF05687,SwissProt:Q8S307,SwissProt:Q94A43,SwissProt:Q9LN63,TAIR:AT1G19350.3,TAIR:AT1G75080.1,TAIR:AT3G50750.1,TrEMBL:B9MVE3,TrEMBL:B9R7Q4,TrEMBL:Q94ET3;Derives_from=GSCOCT00024852001;Name=Cc10_g03290;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein BRASSINAZOLE-RESISTANT 1,CC_functional_completeness:complete,CC_gene:BZR1,CC_gene:BZR2,CC_gene:BEH2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024852001~ Protein BRASSINAZOLE-RESISTANT 1~ BZR1~ complete;original_location=complement(join(2436982..2437296%2C2435516..2436202));owner=coffea | |
| 35571 chr10 manual_curation exon 2435139 2436202 . - . Parent=GSCOCT00024852001 | |
| 35572 chr10 manual_curation exon 2436982 2437729 . - . Parent=GSCOCT00024852001 | |
| 35573 chr10 manual_curation CDS 2435516 2436202 . - 0 Parent=GSCOCT00024852001 | |
| 35574 chr10 manual_curation CDS 2436982 2437296 . - 0 Parent=GSCOCT00024852001 | |
| 35575 chr10 manual_curation gene 2440742 2444660 . - . ID=GSCOCG00024853001;Name=Cc10_g03300 | |
| 35576 chr10 manual_curation mRNA 2440742 2444660 . - . ID=GSCOCT00024853001;Parent=GSCOCG00024853001;Name=Cc10_g03300 | |
| 35577 chr10 manual_curation polypeptide 2441113 2443526 . - . ID=GSCOCP00024853001;Dbxref=GENE3D:G3DSA:3.10.110.10,InterPro:IPR000608,InterPro:IPR015580,InterPro:IPR016135,PANTHER:PTHR11621:SF17,PFAM:PF00179,PROFILE:PS50127,PROSITE:PS00183,SMART:SM00212,SUPERFAMILY:SSF54495,SwissProt:Q6DCZ9,SwissProt:Q9SDY5,SwissProt:Q9ZU75,TAIR:AT2G18600.1,TAIR:AT3G08690.1,TAIR:AT4G36800.1,TrEMBL:A5AHT5,TrEMBL:Q8GV26;Derives_from=GSCOCT00024853001;Name=Cc10_g03300;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006464,GO:0016881,GO:0019787,GO:0043687,GO:0051246,CC_EC_number:6.3.2.19,PRODUCT:NEDD8-conjugating enzyme Ubc12,CC_functional_completeness:complete,CC_gene:RCE1,CC_gene:RCE2,CC_gene:ube2m;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024853001~ NEDD8-conjugating enzyme Ubc12~ RCE1~ complete;original_location=complement(join(2443418..2443526%2C2441765..2441873%2C2441541..2441619%2C2441330..2441446%2C2441113..2441250));owner=coffea | |
| 35578 chr10 manual_curation exon 2440742 2441250 . - . Parent=GSCOCT00024853001 | |
| 35579 chr10 manual_curation exon 2441330 2441446 . - . Parent=GSCOCT00024853001 | |
| 35580 chr10 manual_curation exon 2441541 2441619 . - . Parent=GSCOCT00024853001 | |
| 35581 chr10 manual_curation exon 2441765 2441873 . - . Parent=GSCOCT00024853001 | |
| 35582 chr10 manual_curation exon 2443418 2444660 . - . Parent=GSCOCT00024853001 | |
| 35583 chr10 manual_curation CDS 2441113 2441250 . - 0 Parent=GSCOCT00024853001 | |
| 35584 chr10 manual_curation CDS 2441330 2441446 . - 0 Parent=GSCOCT00024853001 | |
| 35585 chr10 manual_curation CDS 2441541 2441619 . - 2 Parent=GSCOCT00024853001 | |
| 35586 chr10 manual_curation CDS 2441765 2441873 . - 1 Parent=GSCOCT00024853001 | |
| 35587 chr10 manual_curation CDS 2443418 2443526 . - 0 Parent=GSCOCT00024853001 | |
| 35588 chr10 manual_curation gene 2446288 2449400 . + . ID=GSCOCG00024854001;Name=Cc10_g03310 | |
| 35589 chr10 manual_curation mRNA 2446288 2449400 . + . ID=GSCOCT00024854001;Parent=GSCOCG00024854001;Name=Cc10_g03310 | |
| 35590 chr10 manual_curation polypeptide 2446596 2447723 . + . ID=GSCOCP00024854001;Dbxref=GENE3D:G3DSA:1.10.600.10,InterPro:IPR000092,InterPro:IPR008949,InterPro:IPR017446,PANTHER:PTHR12001,PFAM:PF00348,PROSITE:PS00444,PROSITE:PS00723,SUPERFAMILY:SSF48576,SwissProt:P80042,SwissProt:Q42698,SwissProt:Q94ID7,TAIR:AT2G18620.1,TAIR:AT2G18640.1,TAIR:AT4G36810.1,TrEMBL:B1N7F3,TrEMBL:D3W9H8,TrEMBL:D7F2D7;Derives_from=GSCOCT00024854001;Name=Cc10_g03310;Ontology_term=CC_evidence_code:ISS,GO:0008299,CC_EC_number:2.5.1.29,PRODUCT:Geranylgeranyl pyrophosphate synthase%2C chloroplastic,CC_functional_completeness:complete,CC_gene:GGPS1,CC_gene:GGPS;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024854001~ Geranylgeranyl pyrophosphate synthase%2C chloroplastic~ GGPS1~ complete;original_location=2446596..2447723;owner=coffea | |
| 35591 chr10 manual_curation exon 2446288 2449400 . + . Parent=GSCOCT00024854001 | |
| 35592 chr10 manual_curation CDS 2446596 2447723 . + 0 Parent=GSCOCT00024854001 | |
| 35593 chr10 manual_curation gene 2449501 2452869 . - . ID=GSCOCG00024855001;Name=Cc10_g03320 | |
| 35594 chr10 manual_curation mRNA 2449501 2452869 . - . ID=GSCOCT00024855001;Parent=GSCOCG00024855001;Name=Cc10_g03320 | |
| 35595 chr10 manual_curation polypeptide 2449746 2452869 . - . ID=GSCOCP00024855001;Dbxref=InterPro:IPR007757,PFAM:PF05063,PROFILE:PS51143,SwissProt:Q3U034,SwissProt:Q8LFA9,SwissProt:Q8N3J2,TAIR:AT1G19340.1,TrEMBL:B9MVE4,TrEMBL:D7KHC6,TrEMBL:F6H041;Derives_from=GSCOCT00024855001;Name=Cc10_g03320;Ontology_term=CC_evidence_code:ISS,GO:0008168,CC_EC_number:missing_EC_number,PRODUCT:Methyltransferase-like protein 2,CC_functional_completeness:complete,CC_gene:At1g19340,CC_gene:Mettl4,CC_gene:METTL4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024855001~ Methyltransferase-like protein 2~ At1g19340~ complete;original_location=complement(join(2452570..2452869%2C2452168..2452405%2C2451815..2451933%2C2451568..2451601%2C2451031..2451106%2C2450456..2450633%2C2450289..2450378%2C2450104..2450203%2C2449746..2449897));owner=coffea | |
| 35596 chr10 manual_curation exon 2449501 2449897 . - . Parent=GSCOCT00024855001 | |
| 35597 chr10 manual_curation exon 2450104 2450203 . - . Parent=GSCOCT00024855001 | |
| 35598 chr10 manual_curation exon 2450289 2450378 . - . Parent=GSCOCT00024855001 | |
| 35599 chr10 manual_curation exon 2450456 2450633 . - . Parent=GSCOCT00024855001 | |
| 35600 chr10 manual_curation exon 2451031 2451106 . - . Parent=GSCOCT00024855001 | |
| 35601 chr10 manual_curation exon 2451568 2451601 . - . Parent=GSCOCT00024855001 | |
| 35602 chr10 manual_curation exon 2451815 2451933 . - . Parent=GSCOCT00024855001 | |
| 35603 chr10 manual_curation exon 2452168 2452405 . - . Parent=GSCOCT00024855001 | |
| 35604 chr10 manual_curation exon 2452570 2452869 . - . Parent=GSCOCT00024855001 | |
| 35605 chr10 manual_curation CDS 2449746 2449897 . - 1 Parent=GSCOCT00024855001 | |
| 35606 chr10 manual_curation CDS 2450104 2450203 . - 0 Parent=GSCOCT00024855001 | |
| 35607 chr10 manual_curation CDS 2450289 2450378 . - 0 Parent=GSCOCT00024855001 | |
| 35608 chr10 manual_curation CDS 2450456 2450633 . - 2 Parent=GSCOCT00024855001 | |
| 35609 chr10 manual_curation CDS 2451031 2451106 . - 1 Parent=GSCOCT00024855001 | |
| 35610 chr10 manual_curation CDS 2451568 2451601 . - 0 Parent=GSCOCT00024855001 | |
| 35611 chr10 manual_curation CDS 2451815 2451933 . - 1 Parent=GSCOCT00024855001 | |
| 35612 chr10 manual_curation CDS 2452168 2452405 . - 0 Parent=GSCOCT00024855001 | |
| 35613 chr10 manual_curation CDS 2452570 2452869 . - 0 Parent=GSCOCT00024855001 | |
| 35614 chr10 manual_curation gene 2455669 2460444 . + . ID=GSCOCG00024857001;Name=Cc10_g03330 | |
| 35615 chr10 manual_curation mRNA 2455669 2460444 . + . ID=GSCOCT00024857001;Parent=GSCOCG00024857001;Name=Cc10_g03330 | |
| 35616 chr10 manual_curation polypeptide 2457025 2459907 . + . ID=GSCOCP00024857001;Dbxref=InterPro:IPR003441,PFAM:PF02365,PROFILE:PS51005,SUPERFAMILY:SSF101941,TAIR:AT1G69490.1,TAIR:AT5G04410.1,TrEMBL:A9PEC8,TrEMBL:B9MVE5,TrEMBL:B9R7Q1;Derives_from=GSCOCT00024857001;Name=Cc10_g03330;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024857001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=join(2457025..2457184%2C2457784..2457983%2C2458087..2458203%2C2458676..2458997%2C2459639..2459907);owner=coffea | |
| 35617 chr10 manual_curation exon 2455669 2457184 . + . Parent=GSCOCT00024857001 | |
| 35618 chr10 manual_curation exon 2457784 2457983 . + . Parent=GSCOCT00024857001 | |
| 35619 chr10 manual_curation exon 2458087 2458203 . + . Parent=GSCOCT00024857001 | |
| 35620 chr10 manual_curation exon 2458676 2458997 . + . Parent=GSCOCT00024857001 | |
| 35621 chr10 manual_curation exon 2459639 2460444 . + . Parent=GSCOCT00024857001 | |
| 35622 chr10 manual_curation CDS 2457025 2457184 . + 0 Parent=GSCOCT00024857001 | |
| 35623 chr10 manual_curation CDS 2457784 2457983 . + 1 Parent=GSCOCT00024857001 | |
| 35624 chr10 manual_curation CDS 2458087 2458203 . + 0 Parent=GSCOCT00024857001 | |
| 35625 chr10 manual_curation CDS 2458676 2458997 . + 0 Parent=GSCOCT00024857001 | |
| 35626 chr10 manual_curation CDS 2459639 2459907 . + 1 Parent=GSCOCT00024857001 | |
| 35627 chr10 manual_curation gene 2464938 2468480 . + . ID=GSCOCG00024858001;Name=Cc10_g03340 | |
| 35628 chr10 manual_curation mRNA 2464938 2468480 . + . ID=GSCOCT00024858001;Parent=GSCOCG00024858001;Name=Cc10_g03340 | |
| 35629 chr10 manual_curation polypeptide 2465223 2468008 . + . ID=GSCOCP00024858001;Dbxref=TAIR:AT1G19330.3,TAIR:AT1G75060.1,TrEMBL:B9R7Q0,TrEMBL:C6TGL7,TrEMBL:E0CQ00;Derives_from=GSCOCT00024858001;Name=Cc10_g03340;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024858001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75060.1).~ unknown_gene~ complete;original_location=join(2465223..2465420%2C2466661..2466787%2C2467260..2467399%2C2467621..2467680%2C2467771..2467839%2C2467937..2468008);owner=coffea | |
| 35630 chr10 manual_curation exon 2464938 2465420 . + . Parent=GSCOCT00024858001 | |
| 35631 chr10 manual_curation exon 2466661 2466787 . + . Parent=GSCOCT00024858001 | |
| 35632 chr10 manual_curation exon 2467260 2467399 . + . Parent=GSCOCT00024858001 | |
| 35633 chr10 manual_curation exon 2467621 2467680 . + . Parent=GSCOCT00024858001 | |
| 35634 chr10 manual_curation exon 2467771 2467839 . + . Parent=GSCOCT00024858001 | |
| 35635 chr10 manual_curation exon 2467937 2468480 . + . Parent=GSCOCT00024858001 | |
| 35636 chr10 manual_curation CDS 2465223 2465420 . + 0 Parent=GSCOCT00024858001 | |
| 35637 chr10 manual_curation CDS 2466661 2466787 . + 0 Parent=GSCOCT00024858001 | |
| 35638 chr10 manual_curation CDS 2467260 2467399 . + 1 Parent=GSCOCT00024858001 | |
| 35639 chr10 manual_curation CDS 2467621 2467680 . + 0 Parent=GSCOCT00024858001 | |
| 35640 chr10 manual_curation CDS 2467771 2467839 . + 0 Parent=GSCOCT00024858001 | |
| 35641 chr10 manual_curation CDS 2467937 2468008 . + 0 Parent=GSCOCT00024858001 | |
| 35642 chr10 manual_curation gene 2468777 2469598 . + . ID=GSCOCG00024859001;Name=Cc10_g03350 | |
| 35643 chr10 manual_curation mRNA 2468777 2469598 . + . ID=GSCOCT00024859001;Parent=GSCOCG00024859001;Name=Cc10_g03350 | |
| 35644 chr10 manual_curation polypeptide 2468777 2468995 . + . ID=GSCOCP00024859001;Derives_from=GSCOCT00024859001;Name=Cc10_g03350;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024859001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=2468777..2468995;owner=coffea | |
| 35645 chr10 manual_curation exon 2468777 2469598 . + . Parent=GSCOCT00024859001 | |
| 35646 chr10 manual_curation CDS 2468777 2468995 . + 0 Parent=GSCOCT00024859001 | |
| 35647 chr10 manual_curation gene 2484394 2493834 . + . ID=GSCOCG00024860001;Name=Cc10_g03360 | |
| 35648 chr10 manual_curation mRNA 2484394 2493834 . + . ID=GSCOCT00024860001;Parent=GSCOCG00024860001;Name=Cc10_g03360 | |
| 35649 chr10 manual_curation polypeptide 2484903 2493243 . + . ID=GSCOCP00024860001;Dbxref=InterPro:IPR001577,InterPro:IPR013032,PANTHER:PTHR10942,PFAM:PF01457,PRINTS:PR00782,PROSITE:PS00022,PROSITE:PS01186,SwissProt:Q29AK2,SwissProt:Q8BMN4,SwissProt:Q9VH19,TAIR:AT5G42620.2,TrEMBL:E0CPZ7,TrEMBL:I1JTD8,TrEMBL:I1MXU3;Derives_from=GSCOCT00024860001;Name=Cc10_g03360;Ontology_term=CC_evidence_code:ISS,GO:0004222,GO:0006508,GO:0007155,GO:0008270,GO:0016020,CC_EC_number:3.4.24.36,PRODUCT:metalloendopeptidases%3Bzinc ion binding,CC_functional_completeness:complete,CC_gene:Lmln,CC_gene:GA17800,CC_gene:Invadolysin;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024860001~ metalloendopeptidases%3Bzinc ion binding~ Lmln~ complete;original_location=join(2484903..2484995%2C2485970..2486332%2C2486432..2486572%2C2486834..2486966%2C2487070..2487183%2C2487284..2487357%2C2487439..2487513%2C2488577..2488669%2C2488806..2488866%2C2489181..2489513%2C2490342..2490468%2C2490554..2490653%2C2491397..2491466%2C2491575..2491727%2C2491839..2491934%2C2492313..2492632%2C2493061..2493243);owner=coffea | |
| 35650 chr10 manual_curation exon 2484394 2484995 . + . Parent=GSCOCT00024860001 | |
| 35651 chr10 manual_curation exon 2485970 2486332 . + . Parent=GSCOCT00024860001 | |
| 35652 chr10 manual_curation exon 2486432 2486572 . + . Parent=GSCOCT00024860001 | |
| 35653 chr10 manual_curation exon 2486834 2486966 . + . Parent=GSCOCT00024860001 | |
| 35654 chr10 manual_curation exon 2487070 2487183 . + . Parent=GSCOCT00024860001 | |
| 35655 chr10 manual_curation exon 2487284 2487357 . + . Parent=GSCOCT00024860001 | |
| 35656 chr10 manual_curation exon 2487439 2487513 . + . Parent=GSCOCT00024860001 | |
| 35657 chr10 manual_curation exon 2488577 2488669 . + . Parent=GSCOCT00024860001 | |
| 35658 chr10 manual_curation exon 2488806 2488866 . + . Parent=GSCOCT00024860001 | |
| 35659 chr10 manual_curation exon 2489181 2489513 . + . Parent=GSCOCT00024860001 | |
| 35660 chr10 manual_curation exon 2490342 2490468 . + . Parent=GSCOCT00024860001 | |
| 35661 chr10 manual_curation exon 2490554 2490653 . + . Parent=GSCOCT00024860001 | |
| 35662 chr10 manual_curation exon 2491397 2491466 . + . Parent=GSCOCT00024860001 | |
| 35663 chr10 manual_curation exon 2491575 2491727 . + . Parent=GSCOCT00024860001 | |
| 35664 chr10 manual_curation exon 2491839 2491934 . + . Parent=GSCOCT00024860001 | |
| 35665 chr10 manual_curation exon 2492313 2492632 . + . Parent=GSCOCT00024860001 | |
| 35666 chr10 manual_curation exon 2493061 2493834 . + . Parent=GSCOCT00024860001 | |
| 35667 chr10 manual_curation CDS 2484903 2484995 . + 0 Parent=GSCOCT00024860001 | |
| 35668 chr10 manual_curation CDS 2485970 2486332 . + 0 Parent=GSCOCT00024860001 | |
| 35669 chr10 manual_curation CDS 2486432 2486572 . + 0 Parent=GSCOCT00024860001 | |
| 35670 chr10 manual_curation CDS 2486834 2486966 . + 0 Parent=GSCOCT00024860001 | |
| 35671 chr10 manual_curation CDS 2487070 2487183 . + 1 Parent=GSCOCT00024860001 | |
| 35672 chr10 manual_curation CDS 2487284 2487357 . + 1 Parent=GSCOCT00024860001 | |
| 35673 chr10 manual_curation CDS 2487439 2487513 . + 0 Parent=GSCOCT00024860001 | |
| 35674 chr10 manual_curation CDS 2488577 2488669 . + 0 Parent=GSCOCT00024860001 | |
| 35675 chr10 manual_curation CDS 2488806 2488866 . + 0 Parent=GSCOCT00024860001 | |
| 35676 chr10 manual_curation CDS 2489181 2489513 . + 1 Parent=GSCOCT00024860001 | |
| 35677 chr10 manual_curation CDS 2490342 2490468 . + 1 Parent=GSCOCT00024860001 | |
| 35678 chr10 manual_curation CDS 2490554 2490653 . + 2 Parent=GSCOCT00024860001 | |
| 35679 chr10 manual_curation CDS 2491397 2491466 . + 0 Parent=GSCOCT00024860001 | |
| 35680 chr10 manual_curation CDS 2491575 2491727 . + 1 Parent=GSCOCT00024860001 | |
| 35681 chr10 manual_curation CDS 2491839 2491934 . + 1 Parent=GSCOCT00024860001 | |
| 35682 chr10 manual_curation CDS 2492313 2492632 . + 1 Parent=GSCOCT00024860001 | |
| 35683 chr10 manual_curation CDS 2493061 2493243 . + 0 Parent=GSCOCT00024860001 | |
| 35684 chr10 manual_curation gene 2495077 2496537 . - . ID=GSCOCG00024861001;Name=Cc10_g03370 | |
| 35685 chr10 manual_curation mRNA 2495077 2496537 . - . ID=GSCOCT00024861001;Parent=GSCOCG00024861001;Name=Cc10_g03370 | |
| 35686 chr10 manual_curation polypeptide 2495173 2496448 . - . ID=GSCOCP00024861001;Dbxref=GENE3D:G3DSA:2.60.110.10,InterPro:IPR001938,InterPro:IPR017949,PFAM:PF00314,PIR:PIRSF002703,PRINTS:PR00347,PROFILE:PS51367,PROSITE:PS00316,SMART:SM00205,SUPERFAMILY:SSF49870,SwissProt:P28493,SwissProt:P50699,SwissProt:P83332,TAIR:AT1G75030.1,TAIR:AT1G75040.1,TAIR:AT1G75050.1,TrEMBL:A5BLI0,TrEMBL:F6H040,TrEMBL:G9CM53;Derives_from=GSCOCT00024861001;Name=Cc10_g03370;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pathogenesis-related protein 5,CC_functional_completeness:complete,CC_gene:At1g75040,CC_gene:At1g18250;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024861001~ Pathogenesis-related protein 5~ At1g75040~ complete;original_location=complement(join(2496397..2496448%2C2495173..2495864));owner=coffea | |
| 35687 chr10 manual_curation exon 2495077 2495864 . - . Parent=GSCOCT00024861001 | |
| 35688 chr10 manual_curation exon 2496397 2496537 . - . Parent=GSCOCT00024861001 | |
| 35689 chr10 manual_curation CDS 2495173 2495864 . - 1 Parent=GSCOCT00024861001 | |
| 35690 chr10 manual_curation CDS 2496397 2496448 . - 0 Parent=GSCOCT00024861001 | |
| 35691 chr10 manual_curation gene 2499391 2503314 . - . ID=GSCOCG00024862001;Name=Cc10_g03380 | |
| 35692 chr10 manual_curation mRNA 2499391 2503314 . - . ID=GSCOCT00024862001;Parent=GSCOCG00024862001;Name=Cc10_g03380 | |
| 35693 chr10 manual_curation polypeptide 2499501 2501132 . - . ID=GSCOCP00024862001;Dbxref=InterPro:IPR002123,PFAM:PF01553,SMART:SM00563,SwissProt:Q5F3X0,SwissProt:Q8L4Y2,SwissProt:Q9LHN4,TAIR:AT1G75020.1,TAIR:AT3G18850.1,TAIR:AT3G57650.1,TrEMBL:B9GP25,TrEMBL:E0CPZ5,TrEMBL:F6HQJ8;Derives_from=GSCOCT00024862001;Name=Cc10_g03380;Ontology_term=CC_evidence_code:ISS,GO:0008152,GO:0008415,CC_EC_number:2.3.1.51,PRODUCT:Probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 4,CC_functional_completeness:complete,CC_gene:LPAT4,CC_gene:LPAT5,CC_gene:LCLAT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024862001~ Probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 4~ LPAT4~ complete;original_location=complement(join(2500576..2501132%2C2500072..2500202%2C2499501..2499943));owner=coffea | |
| 35694 chr10 manual_curation exon 2503184 2503314 . - . Parent=GSCOCT00024862001 | |
| 35695 chr10 manual_curation exon 2499391 2499943 . - . Parent=GSCOCT00024862001 | |
| 35696 chr10 manual_curation exon 2500072 2500202 . - . Parent=GSCOCT00024862001 | |
| 35697 chr10 manual_curation exon 2500576 2501301 . - . Parent=GSCOCT00024862001 | |
| 35698 chr10 manual_curation CDS 2499501 2499943 . - 1 Parent=GSCOCT00024862001 | |
| 35699 chr10 manual_curation CDS 2500072 2500202 . - 2 Parent=GSCOCT00024862001 | |
| 35700 chr10 manual_curation CDS 2500576 2501132 . - 0 Parent=GSCOCT00024862001 | |
| 35701 chr10 manual_curation gene 2505918 2507102 . + . ID=GSCOCG00024863001;Name=Cc10_g03390 | |
| 35702 chr10 manual_curation mRNA 2505918 2507102 . + . ID=GSCOCT00024863001;Parent=GSCOCG00024863001;Name=Cc10_g03390 | |
| 35703 chr10 manual_curation polypeptide 2505918 2506151 . + . ID=GSCOCP00024863001;Derives_from=GSCOCT00024863001;Name=Cc10_g03390;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024863001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=2505918..2506151;owner=coffea | |
| 35704 chr10 manual_curation exon 2505918 2507102 . + . Parent=GSCOCT00024863001 | |
| 35705 chr10 manual_curation CDS 2505918 2506151 . + 0 Parent=GSCOCT00024863001 | |
| 35706 chr10 manual_curation gene 2509620 2512570 . + . ID=GSCOCG00024864001;Name=Cc10_g03400 | |
| 35707 chr10 manual_curation mRNA 2509620 2512570 . + . ID=GSCOCT00024864001;Parent=GSCOCG00024864001;Name=Cc10_g03400 | |
| 35708 chr10 manual_curation polypeptide 2509741 2512204 . + . ID=GSCOCP00024864001;Dbxref=InterPro:IPR001841,InterPro:IPR017907,InterPro:IPR018957,PFAM:PF00097,PROFILE:PS50089,PROSITE:PS00518,SMART:SM00184,SwissProt:O64425,SwissProt:Q09463,SwissProt:Q6R567,TAIR:AT1G19310.1,TAIR:AT1G74990.1,TAIR:AT2G23780.1,TrEMBL:A5BLE6,TrEMBL:B9GP24,TrEMBL:B9R7P4;Derives_from=GSCOCT00024864001;Name=Cc10_g03400;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative E3 ubiquitin-protein ligase RMA1H1,CC_functional_completeness:modules,CC_gene:RMA1H1,CC_gene:RMA1,CC_gene:rnf-5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024864001~ Putative E3 ubiquitin-protein ligase RMA1H1~ RMA1H1~ modules;original_location=join(2509741..2509993%2C2511465..2512204);owner=coffea | |
| 35709 chr10 manual_curation exon 2509620 2509993 . + . Parent=GSCOCT00024864001 | |
| 35710 chr10 manual_curation exon 2511465 2512570 . + . Parent=GSCOCT00024864001 | |
| 35711 chr10 manual_curation CDS 2509741 2509993 . + 0 Parent=GSCOCT00024864001 | |
| 35712 chr10 manual_curation CDS 2511465 2512204 . + 1 Parent=GSCOCT00024864001 | |
| 35713 chr10 manual_curation gene 2518931 2520279 . + . ID=GSCOCG00024865001;Name=Cc10_g03410 | |
| 35714 chr10 manual_curation mRNA 2518931 2520279 . + . ID=GSCOCT00024865001;Parent=GSCOCG00024865001;Name=Cc10_g03410 | |
| 35715 chr10 manual_curation polypeptide 2519098 2520279 . + . ID=GSCOCP00024865001;Dbxref=InterPro:IPR002495,PFAM:PF01501,SwissProt:O04253,SwissProt:Q9LN68,SwissProt:Q9S7G2,TAIR:AT1G19300.1,TAIR:AT3G50760.1,TAIR:AT4G02130.1,TrEMBL:A5AJV9,TrEMBL:D0ECQ6,TrEMBL:F6H036;Derives_from=GSCOCT00024865001;Name=Cc10_g03410;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Probable galacturonosyltransferase-like 1,CC_functional_completeness:complete,CC_gene:GATL1,CC_gene:GATL2,CC_gene:GATL6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024865001~ Probable galacturonosyltransferase-like 1~ GATL1~ complete;original_location=2519098..2520279;owner=coffea | |
| 35716 chr10 manual_curation exon 2518931 2520279 . + . Parent=GSCOCT00024865001 | |
| 35717 chr10 manual_curation CDS 2519098 2520279 . + 0 Parent=GSCOCT00024865001 | |
| 35718 chr10 manual_curation gene 2520360 2521267 . - . ID=GSCOCG00024866001;Name=Cc10_g03420 | |
| 35719 chr10 manual_curation mRNA 2520360 2521267 . - . ID=GSCOCT00024866001;Parent=GSCOCG00024866001;Name=Cc10_g03420 | |
| 35720 chr10 manual_curation polypeptide 2521085 2521267 . - . ID=GSCOCP00024866001;Derives_from=GSCOCT00024866001;Name=Cc10_g03420;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024866001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(2521085..2521267);owner=coffea | |
| 35721 chr10 manual_curation exon 2520360 2521267 . - . Parent=GSCOCT00024866001 | |
| 35722 chr10 manual_curation CDS 2521085 2521267 . - 0 Parent=GSCOCT00024866001 | |
| 35723 chr10 manual_curation gene 2528121 2532793 . - . ID=GSCOCG00024868001;Name=Cc10_g03430 | |
| 35724 chr10 manual_curation mRNA 2528121 2532793 . - . ID=GSCOCT00024868001;Parent=GSCOCG00024868001;Name=Cc10_g03430 | |
| 35725 chr10 manual_curation polypeptide 2529896 2532793 . - . ID=GSCOCP00024868001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q9FJE6,SwissProt:Q9LN69,SwissProt:Q9LVQ5,TAIR:AT1G19290.1,TAIR:AT5G55840.1,TAIR:AT5G59900.1,TIGRFAMs:TIGR00756,TrEMBL:A5AJV8,TrEMBL:B9R7P1,TrEMBL:F6H035;Derives_from=GSCOCT00024868001;Name=Cc10_g03430;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative pentatricopeptide repeat-containing protein At1g19290,CC_functional_completeness:complete,CC_gene:At1g19290,CC_gene:At5g59900,CC_gene:At5g55840;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024868001~ Putative pentatricopeptide repeat-containing protein At1g19290~ At1g19290~ complete;original_location=complement(join(2530060..2532793%2C2529896..2529918));owner=coffea | |
| 35726 chr10 manual_curation exon 2528121 2528491 . - . Parent=GSCOCT00024868001 | |
| 35727 chr10 manual_curation exon 2528677 2528889 . - . Parent=GSCOCT00024868001 | |
| 35728 chr10 manual_curation exon 2528987 2529136 . - . Parent=GSCOCT00024868001 | |
| 35729 chr10 manual_curation exon 2529480 2529590 . - . Parent=GSCOCT00024868001 | |
| 35730 chr10 manual_curation exon 2529833 2529918 . - . Parent=GSCOCT00024868001 | |
| 35731 chr10 manual_curation exon 2530060 2532793 . - . Parent=GSCOCT00024868001 | |
| 35732 chr10 manual_curation CDS 2529896 2529918 . - 1 Parent=GSCOCT00024868001 | |
| 35733 chr10 manual_curation CDS 2530060 2532793 . - 0 Parent=GSCOCT00024868001 | |
| 35734 chr10 manual_curation gene 2533899 2537304 . - . ID=GSCOCG00024869001;Name=Cc10_g03440 | |
| 35735 chr10 manual_curation mRNA 2533899 2537304 . - . ID=GSCOCT00024869001;Parent=GSCOCG00024869001;Name=Cc10_g03440 | |
| 35736 chr10 manual_curation polypeptide 2534055 2537304 . - . ID=GSCOCP00024869001;Dbxref=InterPro:IPR006603,SMART:SM00679,SwissProt:P38279,SwissProt:Q12010,TAIR:AT2G41050.1,TAIR:AT4G20100.1,TAIR:AT4G36850.1,TrEMBL:B9T4V4,TrEMBL:I1J8Z4,TrEMBL:Q94AH7;Derives_from=GSCOCT00024869001;Name=Cc10_g03440;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized membrane protein YOL092W,CC_functional_completeness:complete,CC_gene:YOL092W,CC_gene:RTC2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024869001~ Putative Uncharacterized membrane protein YOL092W~ YOL092W~ complete;original_location=complement(join(2537072..2537304%2C2536887..2536929%2C2536277..2536303%2C2536049..2536144%2C2535512..2535624%2C2535212..2535386%2C2535022..2535114%2C2534825..2534923%2C2534672..2534692%2C2534537..2534595%2C2534316..2534406%2C2534055..2534153));owner=coffea | |
| 35737 chr10 manual_curation exon 2533899 2534153 . - . Parent=GSCOCT00024869001 | |
| 35738 chr10 manual_curation exon 2534316 2534406 . - . Parent=GSCOCT00024869001 | |
| 35739 chr10 manual_curation exon 2534537 2534595 . - . Parent=GSCOCT00024869001 | |
| 35740 chr10 manual_curation exon 2534672 2534692 . - . Parent=GSCOCT00024869001 | |
| 35741 chr10 manual_curation exon 2534825 2534923 . - . Parent=GSCOCT00024869001 | |
| 35742 chr10 manual_curation exon 2535022 2535114 . - . Parent=GSCOCT00024869001 | |
| 35743 chr10 manual_curation exon 2535212 2535386 . - . Parent=GSCOCT00024869001 | |
| 35744 chr10 manual_curation exon 2535512 2535624 . - . Parent=GSCOCT00024869001 | |
| 35745 chr10 manual_curation exon 2536049 2536144 . - . Parent=GSCOCT00024869001 | |
| 35746 chr10 manual_curation exon 2536277 2536303 . - . Parent=GSCOCT00024869001 | |
| 35747 chr10 manual_curation exon 2536887 2536929 . - . Parent=GSCOCT00024869001 | |
| 35748 chr10 manual_curation exon 2537072 2537304 . - . Parent=GSCOCT00024869001 | |
| 35749 chr10 manual_curation CDS 2534055 2534153 . - 0 Parent=GSCOCT00024869001 | |
| 35750 chr10 manual_curation CDS 2534316 2534406 . - 2 Parent=GSCOCT00024869001 | |
| 35751 chr10 manual_curation CDS 2534537 2534595 . - 0 Parent=GSCOCT00024869001 | |
| 35752 chr10 manual_curation CDS 2534672 2534692 . - 0 Parent=GSCOCT00024869001 | |
| 35753 chr10 manual_curation CDS 2534825 2534923 . - 0 Parent=GSCOCT00024869001 | |
| 35754 chr10 manual_curation CDS 2535022 2535114 . - 0 Parent=GSCOCT00024869001 | |
| 35755 chr10 manual_curation CDS 2535212 2535386 . - 2 Parent=GSCOCT00024869001 | |
| 35756 chr10 manual_curation CDS 2535512 2535624 . - 0 Parent=GSCOCT00024869001 | |
| 35757 chr10 manual_curation CDS 2536049 2536144 . - 0 Parent=GSCOCT00024869001 | |
| 35758 chr10 manual_curation CDS 2536277 2536303 . - 0 Parent=GSCOCT00024869001 | |
| 35759 chr10 manual_curation CDS 2536887 2536929 . - 2 Parent=GSCOCT00024869001 | |
| 35760 chr10 manual_curation CDS 2537072 2537304 . - 0 Parent=GSCOCT00024869001 | |
| 35761 chr10 manual_curation gene 2544610 2545275 . + . ID=GSCOCG00024870001;Name=Cc10_g03450 | |
| 35762 chr10 manual_curation mRNA 2544610 2545275 . + . ID=GSCOCT00024870001;Parent=GSCOCG00024870001;Name=Cc10_g03450 | |
| 35763 chr10 manual_curation polypeptide 2544610 2545185 . + . ID=GSCOCP00024870001;Dbxref=GENE3D:G3DSA:1.10.238.10,InterPro:IPR002048,InterPro:IPR011992,InterPro:IPR018247,InterPro:IPR018248,InterPro:IPR018249,PFAM:PF00036,PROFILE:PS50222,PROSITE:PS00018,SMART:SM00054,SwissProt:Q8L3R2,SwissProt:Q9SRE6,SwissProt:Q9SRE7,TAIR:AT1G76640.1,TAIR:AT1G76650.1,TAIR:AT3G50770.1,TrEMBL:A5ATQ9,TrEMBL:B9T4V6,TrEMBL:F6H034;Derives_from=GSCOCT00024870001;Name=Cc10_g03450;Ontology_term=CC_evidence_code:ISS,GO:0005509,CC_EC_number:missing_EC_number,PRODUCT:Probable calcium-binding protein CML41,CC_functional_completeness:complete,CC_gene:CML41,CC_gene:CML38,CC_gene:CML39;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024870001~ Probable calcium-binding protein CML41~ CML41~ complete;original_location=2544610..2545185;owner=coffea | |
| 35764 chr10 manual_curation exon 2544610 2545275 . + . Parent=GSCOCT00024870001 | |
| 35765 chr10 manual_curation CDS 2544610 2545185 . + 0 Parent=GSCOCT00024870001 | |
| 35766 chr10 manual_curation gene 2546445 2554859 . - . ID=GSCOCG00024871001;Name=Cc10_g03460 | |
| 35767 chr10 manual_curation mRNA 2546445 2554859 . - . ID=GSCOCT00024871001;Parent=GSCOCG00024871001;Name=Cc10_g03460 | |
| 35768 chr10 manual_curation polypeptide 2546643 2553541 . - . ID=GSCOCP00024871001;Dbxref=GENE3D:G3DSA:2.10.110.10,InterPro:IPR001781,InterPro:IPR003903,InterPro:IPR022087,PFAM:PF00412,PFAM:PF12315,PROFILE:PS50023,PROFILE:PS50330,PROSITE:PS00478,SMART:SM00132,SMART:SM00726,SwissProt:P0C7Q8,SwissProt:Q0WSN2,SwissProt:Q8W4F0,TAIR:AT1G19270.1,TAIR:AT2G39830.1,TAIR:AT4G36860.1,TrEMBL:B9GP21,TrEMBL:C5Z5H5,TrEMBL:F6H033;Derives_from=GSCOCT00024871001;Name=Cc10_g03460;Ontology_term=CC_evidence_code:ISS,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Protein DA1,CC_functional_completeness:complete,CC_gene:DA1,CC_gene:DAR1,CC_gene:DAR2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024871001~ Protein DA1~ DA1~ complete;original_location=complement(join(2553431..2553541%2C2552795..2552879%2C2552049..2552220%2C2551312..2551432%2C2550596..2550679%2C2549950..2550069%2C2549608..2549820%2C2549384..2549446%2C2549169..2549287%2C2547808..2547866%2C2546643..2546962));owner=coffea | |
| 35769 chr10 manual_curation exon 2554045 2554208 . - . Parent=GSCOCT00024871001 | |
| 35770 chr10 manual_curation exon 2554558 2554859 . - . Parent=GSCOCT00024871001 | |
| 35771 chr10 manual_curation exon 2546445 2546962 . - . Parent=GSCOCT00024871001 | |
| 35772 chr10 manual_curation exon 2547808 2547866 . - . Parent=GSCOCT00024871001 | |
| 35773 chr10 manual_curation exon 2549169 2549287 . - . Parent=GSCOCT00024871001 | |
| 35774 chr10 manual_curation exon 2549384 2549446 . - . Parent=GSCOCT00024871001 | |
| 35775 chr10 manual_curation exon 2549608 2549820 . - . Parent=GSCOCT00024871001 | |
| 35776 chr10 manual_curation exon 2549950 2550069 . - . Parent=GSCOCT00024871001 | |
| 35777 chr10 manual_curation exon 2550596 2550679 . - . Parent=GSCOCT00024871001 | |
| 35778 chr10 manual_curation exon 2551312 2551432 . - . Parent=GSCOCT00024871001 | |
| 35779 chr10 manual_curation exon 2552049 2552220 . - . Parent=GSCOCT00024871001 | |
| 35780 chr10 manual_curation exon 2552795 2552879 . - . Parent=GSCOCT00024871001 | |
| 35781 chr10 manual_curation exon 2553431 2553616 . - . Parent=GSCOCT00024871001 | |
| 35782 chr10 manual_curation CDS 2546643 2546962 . - 1 Parent=GSCOCT00024871001 | |
| 35783 chr10 manual_curation CDS 2547808 2547866 . - 2 Parent=GSCOCT00024871001 | |
| 35784 chr10 manual_curation CDS 2549169 2549287 . - 0 Parent=GSCOCT00024871001 | |
| 35785 chr10 manual_curation CDS 2549384 2549446 . - 0 Parent=GSCOCT00024871001 | |
| 35786 chr10 manual_curation CDS 2549608 2549820 . - 0 Parent=GSCOCT00024871001 | |
| 35787 chr10 manual_curation CDS 2549950 2550069 . - 0 Parent=GSCOCT00024871001 | |
| 35788 chr10 manual_curation CDS 2550596 2550679 . - 0 Parent=GSCOCT00024871001 | |
| 35789 chr10 manual_curation CDS 2551312 2551432 . - 2 Parent=GSCOCT00024871001 | |
| 35790 chr10 manual_curation CDS 2552049 2552220 . - 1 Parent=GSCOCT00024871001 | |
| 35791 chr10 manual_curation CDS 2552795 2552879 . - 0 Parent=GSCOCT00024871001 | |
| 35792 chr10 manual_curation CDS 2553431 2553541 . - 0 Parent=GSCOCT00024871001 | |
| 35793 chr10 manual_curation gene 2563753 2568179 . + . ID=GSCOCG00024872001;Name=Cc10_g03470 | |
| 35794 chr10 manual_curation mRNA 2563753 2568179 . + . ID=GSCOCT00024872001;Parent=GSCOCG00024872001;Name=Cc10_g03470 | |
| 35795 chr10 manual_curation polypeptide 2564520 2567579 . + . ID=GSCOCP00024872001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR006563,InterPro:IPR009057,InterPro:IPR012287,PFAM:PF07526,SMART:SM00574,SUPERFAMILY:SSF46689,SwissProt:Q38897,SwissProt:Q94KL5,SwissProt:Q9SW80,TAIR:AT2G23760.1,TAIR:AT4G36870.1,TAIR:AT5G41410.1,TrEMBL:B9HEL7,TrEMBL:E0CPY4,TrEMBL:F6GX07;Derives_from=GSCOCT00024872001;Name=Cc10_g03470;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Predicted protein (Fragment),CC_functional_completeness:fragment,CC_gene:BLH2,CC_gene:BLH4,CC_gene:BEL1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024872001~ Predicted protein (Fragment)~ BLH2~ fragment;original_location=join(2564520..2564846%2C2564967..2565312%2C2565503..2565663%2C2566661..2567046%2C2567351..2567411%2C2567514..2567579);owner=coffea | |
| 35796 chr10 manual_curation exon 2563753 2564846 . + . Parent=GSCOCT00024872001 | |
| 35797 chr10 manual_curation exon 2564967 2565312 . + . Parent=GSCOCT00024872001 | |
| 35798 chr10 manual_curation exon 2565503 2565663 . + . Parent=GSCOCT00024872001 | |
| 35799 chr10 manual_curation exon 2566661 2567046 . + . Parent=GSCOCT00024872001 | |
| 35800 chr10 manual_curation exon 2567351 2567411 . + . Parent=GSCOCT00024872001 | |
| 35801 chr10 manual_curation exon 2567514 2568179 . + . Parent=GSCOCT00024872001 | |
| 35802 chr10 manual_curation CDS 2564520 2564846 . + 0 Parent=GSCOCT00024872001 | |
| 35803 chr10 manual_curation CDS 2564967 2565312 . + 0 Parent=GSCOCT00024872001 | |
| 35804 chr10 manual_curation CDS 2565503 2565663 . + 1 Parent=GSCOCT00024872001 | |
| 35805 chr10 manual_curation CDS 2566661 2567046 . + 0 Parent=GSCOCT00024872001 | |
| 35806 chr10 manual_curation CDS 2567351 2567411 . + 2 Parent=GSCOCT00024872001 | |
| 35807 chr10 manual_curation CDS 2567514 2567579 . + 0 Parent=GSCOCT00024872001 | |
| 35808 chr10 manual_curation gene 2568363 2571740 . + . ID=GSCOCG00024873001;Name=Cc10_g03480 | |
| 35809 chr10 manual_curation mRNA 2568363 2571740 . + . ID=GSCOCT00024873001;Parent=GSCOCG00024873001;Name=Cc10_g03480 | |
| 35810 chr10 manual_curation polypeptide 2568363 2571494 . + . ID=GSCOCP00024873001;Derives_from=GSCOCT00024873001;Name=Cc10_g03480;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024873001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(2568363..2568410%2C2568523..2568540%2C2570868..2571494);owner=coffea | |
| 35811 chr10 manual_curation exon 2568363 2568410 . + . Parent=GSCOCT00024873001 | |
| 35812 chr10 manual_curation exon 2568523 2568540 . + . Parent=GSCOCT00024873001 | |
| 35813 chr10 manual_curation exon 2570868 2571740 . + . Parent=GSCOCT00024873001 | |
| 35814 chr10 manual_curation CDS 2568363 2568410 . + 0 Parent=GSCOCT00024873001 | |
| 35815 chr10 manual_curation CDS 2568523 2568540 . + 0 Parent=GSCOCT00024873001 | |
| 35816 chr10 manual_curation CDS 2570868 2571494 . + 0 Parent=GSCOCT00024873001 | |
| 35817 chr10 manual_curation gene 2573422 2577095 . - . ID=GSCOCG00024874001;Name=Cc10_g03490 | |
| 35818 chr10 manual_curation mRNA 2573422 2577095 . - . ID=GSCOCT00024874001;Parent=GSCOCG00024874001;Name=Cc10_g03490 | |
| 35819 chr10 manual_curation polypeptide 2573604 2577095 . - . ID=GSCOCP00024874001;Dbxref=InterPro:IPR000300,InterPro:IPR005135,PFAM:PF03372,SMART:SM00128,SUPERFAMILY:SSF56219,SwissProt:P50942,SwissProt:P59644,SwissProt:Q5EAF2,TAIR:AT1G47510.1,TAIR:AT1G65580.1,TAIR:AT2G31830.2,TrEMBL:B9MVF9,TrEMBL:B9R7N8,TrEMBL:E0CPY3;Derives_from=GSCOCT00024874001;Name=Cc10_g03490;Ontology_term=CC_evidence_code:ISS,GO:0004437,CC_EC_number:3.1.3.56,PRODUCT:Type I inositol 1%2C4%2C5-trisphosphate 5-phosphatase 11,CC_functional_completeness:complete,CC_gene:At1g47510,CC_gene:INP52,CC_gene:Inpp5j;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024874001~ Type I inositol 1%2C4%2C5-trisphosphate 5-phosphatase 11~ At1g47510~ complete;original_location=complement(join(2577067..2577095%2C2576628..2576844%2C2576384..2576514%2C2575769..2575845%2C2575524..2575649%2C2574351..2574538%2C2573900..2574037%2C2573604..2573786));owner=coffea | |
| 35820 chr10 manual_curation exon 2573422 2573786 . - . Parent=GSCOCT00024874001 | |
| 35821 chr10 manual_curation exon 2573900 2574037 . - . Parent=GSCOCT00024874001 | |
| 35822 chr10 manual_curation exon 2574351 2574538 . - . Parent=GSCOCT00024874001 | |
| 35823 chr10 manual_curation exon 2575524 2575649 . - . Parent=GSCOCT00024874001 | |
| 35824 chr10 manual_curation exon 2575769 2575845 . - . Parent=GSCOCT00024874001 | |
| 35825 chr10 manual_curation exon 2576384 2576514 . - . Parent=GSCOCT00024874001 | |
| 35826 chr10 manual_curation exon 2576628 2576844 . - . Parent=GSCOCT00024874001 | |
| 35827 chr10 manual_curation exon 2577067 2577095 . - . Parent=GSCOCT00024874001 | |
| 35828 chr10 manual_curation CDS 2573604 2573786 . - 0 Parent=GSCOCT00024874001 | |
| 35829 chr10 manual_curation CDS 2573900 2574037 . - 0 Parent=GSCOCT00024874001 | |
| 35830 chr10 manual_curation CDS 2574351 2574538 . - 1 Parent=GSCOCT00024874001 | |
| 35831 chr10 manual_curation CDS 2575524 2575649 . - 1 Parent=GSCOCT00024874001 | |
| 35832 chr10 manual_curation CDS 2575769 2575845 . - 2 Parent=GSCOCT00024874001 | |
| 35833 chr10 manual_curation CDS 2576384 2576514 . - 0 Parent=GSCOCT00024874001 | |
| 35834 chr10 manual_curation CDS 2576628 2576844 . - 2 Parent=GSCOCT00024874001 | |
| 35835 chr10 manual_curation CDS 2577067 2577095 . - 0 Parent=GSCOCT00024874001 | |
| 35836 chr10 manual_curation gene 2578794 2583231 . + . ID=GSCOCG00024875001;Name=Cc10_g03500 | |
| 35837 chr10 manual_curation mRNA 2578794 2583231 . + . ID=GSCOCT00024875001;Parent=GSCOCG00024875001;Name=Cc10_g03500 | |
| 35838 chr10 manual_curation polypeptide 2580174 2582694 . + . ID=GSCOCP00024875001;Dbxref=InterPro:IPR001810,InterPro:IPR006566,InterPro:IPR013596,InterPro:IPR022364,PFAM:PF00646,PFAM:PF08387,PROFILE:PS50181,SMART:SM00256,SMART:SM00579,SUPERFAMILY:SSF81383,SwissProt:Q9FGQ3,SwissProt:Q9FZ70,SwissProt:Q9LQM1,TAIR:AT1G13570.1,TAIR:AT1G32375.1,TAIR:AT5G53840.1,TrEMBL:A5BPF7,TrEMBL:B9R7N7,TrEMBL:F6H032;Derives_from=GSCOCT00024875001;Name=Cc10_g03500;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative F-box/FBD/LRR-repeat protein At1g13570,CC_functional_completeness:complete,CC_gene:At1g13570,CC_gene:At5g53840,CC_gene:At1g32375;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024875001~ Putative F-box/FBD/LRR-repeat protein At1g13570~ At1g13570~ complete;original_location=join(2580174..2580185%2C2580922..2581767%2C2582057..2582212%2C2582401..2582694);owner=coffea | |
| 35839 chr10 manual_curation exon 2578794 2578922 . + . Parent=GSCOCT00024875001 | |
| 35840 chr10 manual_curation exon 2580135 2580185 . + . Parent=GSCOCT00024875001 | |
| 35841 chr10 manual_curation exon 2580922 2581767 . + . Parent=GSCOCT00024875001 | |
| 35842 chr10 manual_curation exon 2582057 2582212 . + . Parent=GSCOCT00024875001 | |
| 35843 chr10 manual_curation exon 2582401 2583231 . + . Parent=GSCOCT00024875001 | |
| 35844 chr10 manual_curation CDS 2580174 2580185 . + 0 Parent=GSCOCT00024875001 | |
| 35845 chr10 manual_curation CDS 2580922 2581767 . + 0 Parent=GSCOCT00024875001 | |
| 35846 chr10 manual_curation CDS 2582057 2582212 . + 0 Parent=GSCOCT00024875001 | |
| 35847 chr10 manual_curation CDS 2582401 2582694 . + 0 Parent=GSCOCT00024875001 | |
| 35848 chr10 manual_curation gene 2586824 2588949 . + . ID=GSCOCG00024877001;Name=Cc10_g03510 | |
| 35849 chr10 manual_curation mRNA 2586824 2588949 . + . ID=GSCOCT00024877001;Parent=GSCOCG00024877001;Name=Cc10_g03510 | |
| 35850 chr10 manual_curation polypeptide 2587017 2588034 . + . ID=GSCOCP00024877001;Dbxref=GENE3D:G3DSA:3.30.230.10,InterPro:IPR000754,InterPro:IPR014721,InterPro:IPR020568,InterPro:IPR020574,PANTHER:PTHR21569,PFAM:PF00380,PROSITE:PS00360,SUPERFAMILY:SSF54211,SwissProt:P82278,SwissProt:Q8DMK7,SwissProt:Q9XJ27,TAIR:AT1G74970.1,TAIR:AT3G49080.1,TrEMBL:A5BPF9,TrEMBL:C6SXF0,TrEMBL:I1M8G8;Derives_from=GSCOCT00024877001;Name=Cc10_g03510;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:30S ribosomal protein S9%2C chloroplastic (Fragment),CC_functional_completeness:complete,CC_gene:PRPS9,CC_gene:RPS9,CC_gene:rpsI;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024877001~ 30S ribosomal protein S9%2C chloroplastic (Fragment)~ PRPS9~ complete;original_location=join(2587017..2587355%2C2587747..2588034);owner=coffea | |
| 35851 chr10 manual_curation exon 2588340 2588949 . + . Parent=GSCOCT00024877001 | |
| 35852 chr10 manual_curation exon 2586824 2587355 . + . Parent=GSCOCT00024877001 | |
| 35853 chr10 manual_curation exon 2587747 2588035 . + . Parent=GSCOCT00024877001 | |
| 35854 chr10 manual_curation CDS 2587017 2587355 . + 0 Parent=GSCOCT00024877001 | |
| 35855 chr10 manual_curation CDS 2587747 2588034 . + 0 Parent=GSCOCT00024877001 | |
| 35856 chr10 manual_curation gene 2591081 2595931 . + . ID=GSCOCG00024879001;Name=Cc10_g03520 | |
| 35857 chr10 manual_curation mRNA 2591081 2595931 . + . ID=GSCOCT00024879001;Parent=GSCOCG00024879001;Name=Cc10_g03520 | |
| 35858 chr10 manual_curation polypeptide 2591405 2595196 . + . ID=GSCOCP00024879001;Dbxref=InterPro:IPR001841,InterPro:IPR002867,PFAM:PF01485,PROFILE:PS50089,SMART:SM00647,SwissProt:Q84RR2,SwissProt:Q949V6,SwissProt:Q9LVX0,TAIR:AT2G16090.1,TAIR:AT3G27710.1,TAIR:AT4G34370.1,TrEMBL:B9HRS7,TrEMBL:D7TPW8,TrEMBL:I1LQ69;Derives_from=GSCOCT00024879001;Name=Cc10_g03520;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Probable E3 ubiquitin-protein ligase ARI1,CC_functional_completeness:complete,CC_gene:ARI1,CC_gene:ARI2,CC_gene:ARI3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024879001~ Probable E3 ubiquitin-protein ligase ARI1~ ARI1~ complete;original_location=join(2591405..2591548%2C2592214..2592246%2C2592340..2592619%2C2593375..2593855%2C2594392..2594940%2C2595091..2595196);owner=coffea | |
| 35859 chr10 manual_curation exon 2595315 2595931 . + . Parent=GSCOCT00024879001 | |
| 35860 chr10 manual_curation exon 2591081 2591548 . + . Parent=GSCOCT00024879001 | |
| 35861 chr10 manual_curation exon 2592214 2592246 . + . Parent=GSCOCT00024879001 | |
| 35862 chr10 manual_curation exon 2592340 2592619 . + . Parent=GSCOCT00024879001 | |
| 35863 chr10 manual_curation exon 2593375 2593855 . + . Parent=GSCOCT00024879001 | |
| 35864 chr10 manual_curation exon 2594392 2594940 . + . Parent=GSCOCT00024879001 | |
| 35865 chr10 manual_curation exon 2595091 2595215 . + . Parent=GSCOCT00024879001 | |
| 35866 chr10 manual_curation CDS 2591405 2591548 . + 0 Parent=GSCOCT00024879001 | |
| 35867 chr10 manual_curation CDS 2592214 2592246 . + 0 Parent=GSCOCT00024879001 | |
| 35868 chr10 manual_curation CDS 2592340 2592619 . + 0 Parent=GSCOCT00024879001 | |
| 35869 chr10 manual_curation CDS 2593375 2593855 . + 1 Parent=GSCOCT00024879001 | |
| 35870 chr10 manual_curation CDS 2594392 2594940 . + 2 Parent=GSCOCT00024879001 | |
| 35871 chr10 manual_curation CDS 2595091 2595196 . + 2 Parent=GSCOCT00024879001 | |
| 35872 chr10 manual_curation gene 2598222 2602658 . + . ID=GSCOCG00024880001;Name=Cc10_g03530 | |
| 35873 chr10 manual_curation mRNA 2598222 2602658 . + . ID=GSCOCT00024880001;Parent=GSCOCG00024880001;Name=Cc10_g03530 | |
| 35874 chr10 manual_curation polypeptide 2598638 2602658 . + . ID=GSCOCP00024880001;Dbxref=InterPro:IPR004265,InterPro:IPR006852,PFAM:PF03018,PFAM:PF04765,TAIR:AT1G34550.1,TAIR:AT2G02910.1,TAIR:AT5G42660.1,TrEMBL:D7MS08,TrEMBL:F6H030,TrEMBL:Q9FMZ8;Derives_from=GSCOCT00024880001;Name=Cc10_g03530;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF616),CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024880001~ Protein of unknown function (DUF616)~ unknown_gene~ modules;original_location=join(2598638..2598998%2C2599389..2599606%2C2599800..2599976%2C2600056..2600211%2C2600553..2600829%2C2601181..2601408%2C2602093..2602658);owner=coffea | |
| 35875 chr10 manual_curation exon 2598222 2598998 . + . Parent=GSCOCT00024880001 | |
| 35876 chr10 manual_curation exon 2599389 2599606 . + . Parent=GSCOCT00024880001 | |
| 35877 chr10 manual_curation exon 2599800 2599976 . + . Parent=GSCOCT00024880001 | |
| 35878 chr10 manual_curation exon 2600056 2600211 . + . Parent=GSCOCT00024880001 | |
| 35879 chr10 manual_curation exon 2600553 2600829 . + . Parent=GSCOCT00024880001 | |
| 35880 chr10 manual_curation exon 2601181 2601408 . + . Parent=GSCOCT00024880001 | |
| 35881 chr10 manual_curation exon 2602093 2602658 . + . Parent=GSCOCT00024880001 | |
| 35882 chr10 manual_curation CDS 2598638 2598998 . + 0 Parent=GSCOCT00024880001 | |
| 35883 chr10 manual_curation CDS 2599389 2599606 . + 1 Parent=GSCOCT00024880001 | |
| 35884 chr10 manual_curation CDS 2599800 2599976 . + 0 Parent=GSCOCT00024880001 | |
| 35885 chr10 manual_curation CDS 2600056 2600211 . + 0 Parent=GSCOCT00024880001 | |
| 35886 chr10 manual_curation CDS 2600553 2600829 . + 0 Parent=GSCOCT00024880001 | |
| 35887 chr10 manual_curation CDS 2601181 2601408 . + 1 Parent=GSCOCT00024880001 | |
| 35888 chr10 manual_curation CDS 2602093 2602658 . + 1 Parent=GSCOCT00024880001 | |
| 35889 chr10 manual_curation gene 2604148 2617052 . + . ID=GSCOCG00024881001;Name=Cc10_g03540 | |
| 35890 chr10 manual_curation mRNA 2604148 2617052 . + . ID=GSCOCT00024881001;Parent=GSCOCG00024881001;Name=Cc10_g03540 | |
| 35891 chr10 manual_curation polypeptide 2604220 2616705 . + . ID=GSCOCP00024881001;Dbxref=InterPro:IPR019160,PFAM:PF09763,SwissProt:Q9NV70,SwissProt:Q9SX85,SwissProt:Q9SX86,TAIR:AT1G47550.2,TAIR:AT1G47560.1,TrEMBL:B9R7N2,TrEMBL:D7KAU5,TrEMBL:E0CPX5;Derives_from=GSCOCT00024881001;Name=Cc10_g03540;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Exocyst complex component SEC3A,CC_functional_completeness:complete,CC_gene:SEC3A,CC_gene:SEC3B,CC_gene:EXOC1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024881001~ Exocyst complex component SEC3A~ SEC3A~ complete;original_location=join(2604220..2604397%2C2605698..2605768%2C2606369..2606449%2C2606558..2606625%2C2606727..2606829%2C2607378..2607526%2C2607971..2608088%2C2608597..2608701%2C2609335..2609436%2C2609547..2609684%2C2610363..2610491%2C2610575..2610655%2C2610752..2610826%2C2611464..2611637%2C2611711..2611864%2C2611945..2612009%2C2613143..2613313%2C2613398..2613477%2C2614215..2614296%2C2614616..2614713%2C2614817..2614925%2C2615033..2615101%2C2615960..2616025%2C2616094..2616183%2C2616595..2616705);owner=coffea | |
| 35892 chr10 manual_curation exon 2604148 2604397 . + . Parent=GSCOCT00024881001 | |
| 35893 chr10 manual_curation exon 2605698 2605768 . + . Parent=GSCOCT00024881001 | |
| 35894 chr10 manual_curation exon 2606369 2606449 . + . Parent=GSCOCT00024881001 | |
| 35895 chr10 manual_curation exon 2606558 2606625 . + . Parent=GSCOCT00024881001 | |
| 35896 chr10 manual_curation exon 2606727 2606829 . + . Parent=GSCOCT00024881001 | |
| 35897 chr10 manual_curation exon 2607378 2607526 . + . Parent=GSCOCT00024881001 | |
| 35898 chr10 manual_curation exon 2607971 2608088 . + . Parent=GSCOCT00024881001 | |
| 35899 chr10 manual_curation exon 2608597 2608701 . + . Parent=GSCOCT00024881001 | |
| 35900 chr10 manual_curation exon 2609335 2609436 . + . Parent=GSCOCT00024881001 | |
| 35901 chr10 manual_curation exon 2609547 2609684 . + . Parent=GSCOCT00024881001 | |
| 35902 chr10 manual_curation exon 2610363 2610491 . + . Parent=GSCOCT00024881001 | |
| 35903 chr10 manual_curation exon 2610575 2610655 . + . Parent=GSCOCT00024881001 | |
| 35904 chr10 manual_curation exon 2610752 2610826 . + . Parent=GSCOCT00024881001 | |
| 35905 chr10 manual_curation exon 2611464 2611637 . + . Parent=GSCOCT00024881001 | |
| 35906 chr10 manual_curation exon 2611711 2611864 . + . Parent=GSCOCT00024881001 | |
| 35907 chr10 manual_curation exon 2611945 2612009 . + . Parent=GSCOCT00024881001 | |
| 35908 chr10 manual_curation exon 2613143 2613313 . + . Parent=GSCOCT00024881001 | |
| 35909 chr10 manual_curation exon 2613398 2613477 . + . Parent=GSCOCT00024881001 | |
| 35910 chr10 manual_curation exon 2614215 2614296 . + . Parent=GSCOCT00024881001 | |
| 35911 chr10 manual_curation exon 2614616 2614713 . + . Parent=GSCOCT00024881001 | |
| 35912 chr10 manual_curation exon 2614817 2614925 . + . Parent=GSCOCT00024881001 | |
| 35913 chr10 manual_curation exon 2615033 2615101 . + . Parent=GSCOCT00024881001 | |
| 35914 chr10 manual_curation exon 2615960 2616025 . + . Parent=GSCOCT00024881001 | |
| 35915 chr10 manual_curation exon 2616094 2616183 . + . Parent=GSCOCT00024881001 | |
| 35916 chr10 manual_curation exon 2616595 2617052 . + . Parent=GSCOCT00024881001 | |
| 35917 chr10 manual_curation CDS 2604220 2604397 . + 0 Parent=GSCOCT00024881001 | |
| 35918 chr10 manual_curation CDS 2605698 2605768 . + 1 Parent=GSCOCT00024881001 | |
| 35919 chr10 manual_curation CDS 2606369 2606449 . + 0 Parent=GSCOCT00024881001 | |
| 35920 chr10 manual_curation CDS 2606558 2606625 . + 0 Parent=GSCOCT00024881001 | |
| 35921 chr10 manual_curation CDS 2606727 2606829 . + 2 Parent=GSCOCT00024881001 | |
| 35922 chr10 manual_curation CDS 2607378 2607526 . + 0 Parent=GSCOCT00024881001 | |
| 35923 chr10 manual_curation CDS 2607971 2608088 . + 2 Parent=GSCOCT00024881001 | |
| 35924 chr10 manual_curation CDS 2608597 2608701 . + 0 Parent=GSCOCT00024881001 | |
| 35925 chr10 manual_curation CDS 2609335 2609436 . + 0 Parent=GSCOCT00024881001 | |
| 35926 chr10 manual_curation CDS 2609547 2609684 . + 0 Parent=GSCOCT00024881001 | |
| 35927 chr10 manual_curation CDS 2610363 2610491 . + 0 Parent=GSCOCT00024881001 | |
| 35928 chr10 manual_curation CDS 2610575 2610655 . + 0 Parent=GSCOCT00024881001 | |
| 35929 chr10 manual_curation CDS 2610752 2610826 . + 0 Parent=GSCOCT00024881001 | |
| 35930 chr10 manual_curation CDS 2611464 2611637 . + 0 Parent=GSCOCT00024881001 | |
| 35931 chr10 manual_curation CDS 2611711 2611864 . + 0 Parent=GSCOCT00024881001 | |
| 35932 chr10 manual_curation CDS 2611945 2612009 . + 1 Parent=GSCOCT00024881001 | |
| 35933 chr10 manual_curation CDS 2613143 2613313 . + 0 Parent=GSCOCT00024881001 | |
| 35934 chr10 manual_curation CDS 2613398 2613477 . + 0 Parent=GSCOCT00024881001 | |
| 35935 chr10 manual_curation CDS 2614215 2614296 . + 2 Parent=GSCOCT00024881001 | |
| 35936 chr10 manual_curation CDS 2614616 2614713 . + 0 Parent=GSCOCT00024881001 | |
| 35937 chr10 manual_curation CDS 2614817 2614925 . + 2 Parent=GSCOCT00024881001 | |
| 35938 chr10 manual_curation CDS 2615033 2615101 . + 0 Parent=GSCOCT00024881001 | |
| 35939 chr10 manual_curation CDS 2615960 2616025 . + 0 Parent=GSCOCT00024881001 | |
| 35940 chr10 manual_curation CDS 2616094 2616183 . + 0 Parent=GSCOCT00024881001 | |
| 35941 chr10 manual_curation CDS 2616595 2616705 . + 0 Parent=GSCOCT00024881001 | |
| 35942 chr10 manual_curation gene 2626202 2628285 . - . ID=GSCOCG00024882001;Name=Cc10_g03550 | |
| 35943 chr10 manual_curation mRNA 2626202 2628285 . - . ID=GSCOCT00024882001;Parent=GSCOCG00024882001;Name=Cc10_g03550 | |
| 35944 chr10 manual_curation polypeptide 2626717 2628153 . - . ID=GSCOCP00024882001;Dbxref=InterPro:IPR005134,PFAM:PF03350,TAIR:AT4G19390.1,TAIR:AT5G13720.1,TrEMBL:B9MVG6,TrEMBL:B9R7N0,TrEMBL:E0CPX3;Derives_from=GSCOCT00024882001;Name=Cc10_g03550;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Predicted protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024882001~ Putative Predicted protein~ unknown_gene~ complete;original_location=complement(join(2627761..2628153%2C2627535..2627612%2C2627329..2627428%2C2627071..2627192%2C2626717..2626944));owner=coffea | |
| 35945 chr10 manual_curation exon 2626202 2626944 . - . Parent=GSCOCT00024882001 | |
| 35946 chr10 manual_curation exon 2627071 2627192 . - . Parent=GSCOCT00024882001 | |
| 35947 chr10 manual_curation exon 2627329 2627428 . - . Parent=GSCOCT00024882001 | |
| 35948 chr10 manual_curation exon 2627535 2627612 . - . Parent=GSCOCT00024882001 | |
| 35949 chr10 manual_curation exon 2627761 2628285 . - . Parent=GSCOCT00024882001 | |
| 35950 chr10 manual_curation CDS 2626717 2626944 . - 0 Parent=GSCOCT00024882001 | |
| 35951 chr10 manual_curation CDS 2627071 2627192 . - 1 Parent=GSCOCT00024882001 | |
| 35952 chr10 manual_curation CDS 2627329 2627428 . - 0 Parent=GSCOCT00024882001 | |
| 35953 chr10 manual_curation CDS 2627535 2627612 . - 0 Parent=GSCOCT00024882001 | |
| 35954 chr10 manual_curation CDS 2627761 2628153 . - 0 Parent=GSCOCT00024882001 | |
| 35955 chr10 manual_curation gene 2630445 2633328 . - . ID=GSCOCG00024884001;Name=Cc10_g03560 | |
| 35956 chr10 manual_curation mRNA 2630445 2633328 . - . ID=GSCOCT00024884001;Parent=GSCOCG00024884001;Name=Cc10_g03560 | |
| 35957 chr10 manual_curation polypeptide 2630445 2633112 . - . ID=GSCOCP00024884001;Dbxref=TAIR:AT1G48460.1,TAIR:AT5G63040.1,TrEMBL:B9R7M9,TrEMBL:D7KD17,TrEMBL:E0CPX1;Derives_from=GSCOCT00024884001;Name=Cc10_g03560;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024884001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast envelope%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G63040.1)%3B Has 60 Blast hits to 60 proteins in 14 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 60%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(2633035..2633112%2C2632838..2632928%2C2632352..2632684%2C2630756..2631096%2C2630445..2630663));owner=coffea | |
| 35958 chr10 manual_curation exon 2630445 2630663 . - . Parent=GSCOCT00024884001 | |
| 35959 chr10 manual_curation exon 2630756 2631096 . - . Parent=GSCOCT00024884001 | |
| 35960 chr10 manual_curation exon 2632352 2632684 . - . Parent=GSCOCT00024884001 | |
| 35961 chr10 manual_curation exon 2632838 2632928 . - . Parent=GSCOCT00024884001 | |
| 35962 chr10 manual_curation exon 2633035 2633328 . - . Parent=GSCOCT00024884001 | |
| 35963 chr10 manual_curation CDS 2630445 2630663 . - 0 Parent=GSCOCT00024884001 | |
| 35964 chr10 manual_curation CDS 2630756 2631096 . - 1 Parent=GSCOCT00024884001 | |
| 35965 chr10 manual_curation CDS 2632352 2632684 . - 1 Parent=GSCOCT00024884001 | |
| 35966 chr10 manual_curation CDS 2632838 2632928 . - 0 Parent=GSCOCT00024884001 | |
| 35967 chr10 manual_curation CDS 2633035 2633112 . - 0 Parent=GSCOCT00024884001 | |
| 35968 chr10 manual_curation gene 2641136 2643159 . + . ID=GSCOCG00024886001;Name=Cc10_g03570 | |
| 35969 chr10 manual_curation mRNA 2641136 2643159 . + . ID=GSCOCT00024886001;Parent=GSCOCG00024886001;Name=Cc10_g03570 | |
| 35970 chr10 manual_curation polypeptide 2641136 2642749 . + . ID=GSCOCP00024886001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002403,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00465,SUPERFAMILY:SSF48264,SwissProt:P48417,SwissProt:Q40778,SwissProt:Q96242,TAIR:AT4G15440.1,TAIR:AT5G42650.1,TrEMBL:B9R7M7,TrEMBL:Q2PJB7,TrEMBL:Q4ZJ74;Derives_from=GSCOCT00024886001;Name=Cc10_g03570;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,CC_EC_number:4.2.1.92,PRODUCT:Allene oxide synthase%2C chloroplastic,CC_functional_completeness:complete,CC_gene:CYP74A,CC_gene:CYP74A2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024886001~ Allene oxide synthase%2C chloroplastic~ CYP74A~ complete;original_location=2641136..2642749;owner=coffea | |
| 35971 chr10 manual_curation exon 2641136 2643159 . + . Parent=GSCOCT00024886001 | |
| 35972 chr10 manual_curation CDS 2641136 2642749 . + 0 Parent=GSCOCT00024886001 | |
| 35973 chr10 manual_curation gene 2650401 2652596 . + . ID=GSCOCG00024887001;Name=Cc10_g03580 | |
| 35974 chr10 manual_curation mRNA 2650401 2652596 . + . ID=GSCOCT00024887001;Parent=GSCOCG00024887001;Name=Cc10_g03580 | |
| 35975 chr10 manual_curation polypeptide 2650760 2652328 . + . ID=GSCOCP00024887001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002403,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00465,SUPERFAMILY:SSF48264,SwissProt:P48417,SwissProt:Q40778,SwissProt:Q96242,TAIR:AT4G15440.1,TAIR:AT5G42650.1,TrEMBL:B9GP05,TrEMBL:F8WS73,TrEMBL:Q8RW07;Derives_from=GSCOCT00024887001;Name=Cc10_g03580;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,CC_EC_number:4.2.1.92,PRODUCT:Allene oxide synthase%2C chloroplastic,CC_functional_completeness:complete,CC_gene:CYP74A,CC_gene:CYP74A2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024887001~ Allene oxide synthase%2C chloroplastic~ CYP74A~ complete;original_location=2650760..2652328;owner=coffea | |
| 35976 chr10 manual_curation exon 2650401 2652596 . + . Parent=GSCOCT00024887001 | |
| 35977 chr10 manual_curation CDS 2650760 2652328 . + 0 Parent=GSCOCT00024887001 | |
| 35978 chr10 manual_curation gene 2657897 2661993 . - . ID=GSCOCG00024889001;Name=Cc10_g03590 | |
| 35979 chr10 manual_curation mRNA 2657897 2661993 . - . ID=GSCOCT00024889001;Parent=GSCOCG00024889001;Name=Cc10_g03590 | |
| 35980 chr10 manual_curation polypeptide 2657897 2661744 . - . ID=GSCOCP00024889001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:P0C5E2,SwissProt:Q8GYF5,SwissProt:Q8RY67,TAIR:AT2G23450.2,TAIR:AT5G38210.1,TAIR:AT5G66790.1,TrEMBL:B9MVH1,TrEMBL:B9S8Q9,TrEMBL:E0CPW9;Derives_from=GSCOCT00024889001;Name=Cc10_g03590;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Wall-associated receptor kinase-like 14,CC_functional_completeness:complete,CC_gene:WAKL14,CC_gene:WAKL21,CC_gene:At1g18390;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024889001~ Wall-associated receptor kinase-like 14~ WAKL14~ complete;original_location=complement(join(2661012..2661744%2C2659277..2659354%2C2657897..2659164));owner=coffea | |
| 35981 chr10 manual_curation exon 2657897 2659164 . - . Parent=GSCOCT00024889001 | |
| 35982 chr10 manual_curation exon 2659277 2659354 . - . Parent=GSCOCT00024889001 | |
| 35983 chr10 manual_curation exon 2661012 2661993 . - . Parent=GSCOCT00024889001 | |
| 35984 chr10 manual_curation CDS 2657897 2659164 . - 1 Parent=GSCOCT00024889001 | |
| 35985 chr10 manual_curation CDS 2659277 2659354 . - 1 Parent=GSCOCT00024889001 | |
| 35986 chr10 manual_curation CDS 2661012 2661744 . - 0 Parent=GSCOCT00024889001 | |
| 35987 chr10 manual_curation gene 2667442 2667762 . - . ID=GSCOCG00024891001;Name=Cc10_g03600 | |
| 35988 chr10 manual_curation mRNA 2667442 2667762 . - . ID=GSCOCT00024891001;Parent=GSCOCG00024891001;Name=Cc10_g03600 | |
| 35989 chr10 manual_curation polypeptide 2667442 2667762 . - . ID=GSCOCP00024891001;Dbxref=TrEMBL:A5BCU0,TrEMBL:E0CPW8;Derives_from=GSCOCT00024891001;Name=Cc10_g03600;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024891001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=complement(join(2667556..2667762%2C2667442..2667471));owner=coffea | |
| 35990 chr10 manual_curation exon 2667442 2667471 . - . Parent=GSCOCT00024891001 | |
| 35991 chr10 manual_curation exon 2667556 2667762 . - . Parent=GSCOCT00024891001 | |
| 35992 chr10 manual_curation CDS 2667442 2667471 . - 0 Parent=GSCOCT00024891001 | |
| 35993 chr10 manual_curation CDS 2667556 2667762 . - 0 Parent=GSCOCT00024891001 | |
| 35994 chr10 manual_curation gene 2675614 2677333 . + . ID=GSCOCG00024892001;Name=Cc10_g03610 | |
| 35995 chr10 manual_curation mRNA 2675614 2677333 . + . ID=GSCOCT00024892001;Parent=GSCOCG00024892001;Name=Cc10_g03610 | |
| 35996 chr10 manual_curation polypeptide 2675614 2676948 . + . ID=GSCOCP00024892001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019781,InterPro:IPR019782,InterPro:IPR020472,PFAM:PF00400,PRINTS:PR00320,PROFILE:PS50082,PROFILE:PS50294,SMART:SM00320,SUPERFAMILY:SSF50978,SwissProt:P90648,SwissProt:Q61FW2,SwissProt:Q93794,TAIR:AT2G26490.1,TAIR:AT3G50390.1,TAIR:AT4G34380.1,TrEMBL:B9R7M4,TrEMBL:F6H024,TrEMBL:O48716;Derives_from=GSCOCT00024892001;Name=Cc10_g03610;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.7.11.7,PRODUCT:Putative Myosin heavy chain kinase B,CC_functional_completeness:fragment,CC_gene:mhkB,CC_gene:sel-10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024892001~ Putative Myosin heavy chain kinase B~ mhkB~ fragment;original_location=2675614..2676948;owner=coffea | |
| 35997 chr10 manual_curation exon 2675614 2677333 . + . Parent=GSCOCT00024892001 | |
| 35998 chr10 manual_curation CDS 2675614 2676948 . + 0 Parent=GSCOCT00024892001 | |
| 35999 chr10 manual_curation gene 2678596 2683644 . - . ID=GSCOCG00024893001;Name=Cc10_g03620 | |
| 36000 chr10 manual_curation mRNA 2678596 2683644 . - . ID=GSCOCT00024893001;Parent=GSCOCG00024893001;Name=Cc10_g03620 | |
| 36001 chr10 manual_curation polypeptide 2679004 2683618 . - . ID=GSCOCP00024893001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR008266,InterPro:IPR011009,InterPro:IPR020635,PFAM:PF07714,PROFILE:PS50011,PROSITE:PS00109,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q9C660,SwissProt:Q9FFW5,SwissProt:Q9SX31,TAIR:AT1G55200.1,TAIR:AT3G13690.1,TAIR:AT5G56790.1,TrEMBL:A5BCT8,TrEMBL:B9GP01,TrEMBL:E0CPW6;Derives_from=GSCOCT00024893001;Name=Cc10_g03620;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0004713,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,CC_EC_number:2.7.11.25,PRODUCT:Putative Protein kinase protein with adenine nucleotide alpha hydrolases-like domain,CC_functional_completeness:complete,CC_gene:PERK9,CC_gene:PERK8,CC_gene:PERK10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024893001~ Putative Protein kinase protein with adenine nucleotide alpha hydrolases-like domain~ PERK9~ complete;original_location=complement(join(2683432..2683618%2C2683164..2683321%2C2682506..2682600%2C2680411..2681453%2C2680136..2680296%2C2679834..2679910%2C2679318..2679642%2C2679004..2679153));owner=coffea | |
| 36002 chr10 manual_curation exon 2678596 2679153 . - . Parent=GSCOCT00024893001 | |
| 36003 chr10 manual_curation exon 2679318 2679642 . - . Parent=GSCOCT00024893001 | |
| 36004 chr10 manual_curation exon 2679834 2679910 . - . Parent=GSCOCT00024893001 | |
| 36005 chr10 manual_curation exon 2680136 2680296 . - . Parent=GSCOCT00024893001 | |
| 36006 chr10 manual_curation exon 2680411 2681453 . - . Parent=GSCOCT00024893001 | |
| 36007 chr10 manual_curation exon 2682506 2682600 . - . Parent=GSCOCT00024893001 | |
| 36008 chr10 manual_curation exon 2683164 2683321 . - . Parent=GSCOCT00024893001 | |
| 36009 chr10 manual_curation exon 2683432 2683644 . - . Parent=GSCOCT00024893001 | |
| 36010 chr10 manual_curation CDS 2679004 2679153 . - 0 Parent=GSCOCT00024893001 | |
| 36011 chr10 manual_curation CDS 2679318 2679642 . - 2 Parent=GSCOCT00024893001 | |
| 36012 chr10 manual_curation CDS 2679834 2679910 . - 0 Parent=GSCOCT00024893001 | |
| 36013 chr10 manual_curation CDS 2680136 2680296 . - 1 Parent=GSCOCT00024893001 | |
| 36014 chr10 manual_curation CDS 2680411 2681453 . - 2 Parent=GSCOCT00024893001 | |
| 36015 chr10 manual_curation CDS 2682506 2682600 . - 0 Parent=GSCOCT00024893001 | |
| 36016 chr10 manual_curation CDS 2683164 2683321 . - 1 Parent=GSCOCT00024893001 | |
| 36017 chr10 manual_curation CDS 2683432 2683618 . - 0 Parent=GSCOCT00024893001 | |
| 36018 chr10 manual_curation gene 2688309 2691159 . - . ID=GSCOCG00024894001;Name=Cc10_g03630 | |
| 36019 chr10 manual_curation mRNA 2688309 2691159 . - . ID=GSCOCT00024894001;Parent=GSCOCG00024894001;Name=Cc10_g03630 | |
| 36020 chr10 manual_curation polypeptide 2688309 2691159 . - . ID=GSCOCP00024894001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:O49858,SwissProt:Q43068,SwissProt:Q9SZ46,TAIR:AT4G31940.1,TAIR:AT4G31950.1,TAIR:AT4G31970.1,TrEMBL:F6H019,TrEMBL:F6H021,TrEMBL:F6H1G0;Derives_from=GSCOCT00024894001;Name=Cc10_g03630;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.21,PRODUCT:Cytochrome P450 82A3,CC_functional_completeness:complete,CC_gene:CYP82A3,CC_gene:CYP82C4,CC_gene:CYP82A1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024894001~ Cytochrome P450 82A3~ CYP82A3~ complete;original_location=complement(join(2690404..2691159%2C2688309..2688938));owner=coffea | |
| 36021 chr10 manual_curation exon 2688309 2688938 . - . Parent=GSCOCT00024894001 | |
| 36022 chr10 manual_curation exon 2690404 2691159 . - . Parent=GSCOCT00024894001 | |
| 36023 chr10 manual_curation CDS 2688309 2688938 . - 0 Parent=GSCOCT00024894001 | |
| 36024 chr10 manual_curation CDS 2690404 2691159 . - 0 Parent=GSCOCT00024894001 | |
| 36025 chr10 manual_curation gene 2691221 2692616 . + . ID=GSCOCG00024895001;Name=Cc10_g03640 | |
| 36026 chr10 manual_curation mRNA 2691221 2692616 . + . ID=GSCOCT00024895001;Parent=GSCOCG00024895001;Name=Cc10_g03640 | |
| 36027 chr10 manual_curation polypeptide 2691221 2691457 . + . ID=GSCOCP00024895001;Derives_from=GSCOCT00024895001;Name=Cc10_g03640;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024895001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=2691221..2691457;owner=coffea | |
| 36028 chr10 manual_curation exon 2691221 2692616 . + . Parent=GSCOCT00024895001 | |
| 36029 chr10 manual_curation CDS 2691221 2691457 . + 0 Parent=GSCOCT00024895001 | |
| 36030 chr10 manual_curation gene 2700985 2708820 . - . ID=GSCOCG00024897001;Name=Cc10_g03650 | |
| 36031 chr10 manual_curation mRNA 2700985 2708820 . - . ID=GSCOCT00024897001;Parent=GSCOCG00024897001;Name=Cc10_g03650 | |
| 36032 chr10 manual_curation polypeptide 2700985 2708820 . - . ID=GSCOCP00024897001;Dbxref=GENE3D:G3DSA:1.10.10.60,GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR006447,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR014778,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PFAM:PF00249,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF46689,SUPERFAMILY:SSF48264,SwissProt:O49858,SwissProt:O49859,SwissProt:Q9SZ46,TAIR:AT4G31940.1,TAIR:AT4G31950.1,TAIR:AT4G31970.1,TIGRFAMs:TIGR01557,TrEMBL:F6H019,TrEMBL:F6H021,TrEMBL:F6H1G0;Derives_from=GSCOCT00024897001;Name=Cc10_g03650;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0045449,GO:0055114,CC_EC_number:1.14.13.21,PRODUCT:Cytochrome P450 82A3,CC_functional_completeness:modules,CC_gene:CYP82A3,CC_gene:CYP82A4,CC_gene:CYP82C4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024897001~ Cytochrome P450 82A3~ CYP82A3~ modules;original_location=complement(join(2708358..2708820%2C2708033..2708109%2C2707731..2707779%2C2707334..2707508%2C2705984..2706080%2C2705677..2705846%2C2701747..2702731%2C2700985..2701611));owner=coffea | |
| 36033 chr10 manual_curation exon 2700985 2701611 . - . Parent=GSCOCT00024897001 | |
| 36034 chr10 manual_curation exon 2701747 2702731 . - . Parent=GSCOCT00024897001 | |
| 36035 chr10 manual_curation exon 2705677 2705846 . - . Parent=GSCOCT00024897001 | |
| 36036 chr10 manual_curation exon 2705984 2706080 . - . Parent=GSCOCT00024897001 | |
| 36037 chr10 manual_curation exon 2707334 2707508 . - . Parent=GSCOCT00024897001 | |
| 36038 chr10 manual_curation exon 2707731 2707779 . - . Parent=GSCOCT00024897001 | |
| 36039 chr10 manual_curation exon 2708033 2708109 . - . Parent=GSCOCT00024897001 | |
| 36040 chr10 manual_curation exon 2708358 2708820 . - . Parent=GSCOCT00024897001 | |
| 36041 chr10 manual_curation CDS 2700985 2701611 . - 0 Parent=GSCOCT00024897001 | |
| 36042 chr10 manual_curation CDS 2701747 2702731 . - 2 Parent=GSCOCT00024897001 | |
| 36043 chr10 manual_curation CDS 2705677 2705846 . - 0 Parent=GSCOCT00024897001 | |
| 36044 chr10 manual_curation CDS 2705984 2706080 . - 2 Parent=GSCOCT00024897001 | |
| 36045 chr10 manual_curation CDS 2707334 2707508 . - 1 Parent=GSCOCT00024897001 | |
| 36046 chr10 manual_curation CDS 2707731 2707779 . - 0 Parent=GSCOCT00024897001 | |
| 36047 chr10 manual_curation CDS 2708033 2708109 . - 1 Parent=GSCOCT00024897001 | |
| 36048 chr10 manual_curation CDS 2708358 2708820 . - 0 Parent=GSCOCT00024897001 | |
| 36049 chr10 manual_curation gene 2719980 2724186 . + . ID=GSCOCG00024899001;Name=Cc10_g03660 | |
| 36050 chr10 manual_curation mRNA 2719980 2724186 . + . ID=GSCOCT00024899001;Parent=GSCOCG00024899001;Name=Cc10_g03660 | |
| 36051 chr10 manual_curation polypeptide 2720089 2723877 . + . ID=GSCOCP00024899001;Dbxref=InterPro:IPR019164,PFAM:PF09767,SwissProt:Q28FY5,SwissProt:Q6DFI2,SwissProt:Q6DGL7,TAIR:AT1G47640.1,TrEMBL:A9P9X3,TrEMBL:B9MVI5,TrEMBL:G7J5Q0;Derives_from=GSCOCT00024899001;Name=Cc10_g03660;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:tmem147;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024899001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: mitochondrion%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2053%2C membrane (InterPro:IPR019164)%3B Has 204 Blast hits to 204 proteins in 84 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 127%3B Fungi - 0%3B Plants - 50%3B Viruses - 0%3B Other Eukaryotes - 27 (source: NCBI BLink).~ tmem147~ complete;original_location=join(2720089..2720165%2C2720938..2721007%2C2721117..2721176%2C2721864..2721978%2C2723064..2723179%2C2723349..2723473%2C2723754..2723877);owner=coffea | |
| 36052 chr10 manual_curation exon 2719980 2720165 . + . Parent=GSCOCT00024899001 | |
| 36053 chr10 manual_curation exon 2720938 2721007 . + . Parent=GSCOCT00024899001 | |
| 36054 chr10 manual_curation exon 2721117 2721176 . + . Parent=GSCOCT00024899001 | |
| 36055 chr10 manual_curation exon 2721864 2721978 . + . Parent=GSCOCT00024899001 | |
| 36056 chr10 manual_curation exon 2723064 2723179 . + . Parent=GSCOCT00024899001 | |
| 36057 chr10 manual_curation exon 2723349 2723473 . + . Parent=GSCOCT00024899001 | |
| 36058 chr10 manual_curation exon 2723754 2724186 . + . Parent=GSCOCT00024899001 | |
| 36059 chr10 manual_curation CDS 2720089 2720165 . + 0 Parent=GSCOCT00024899001 | |
| 36060 chr10 manual_curation CDS 2720938 2721007 . + 2 Parent=GSCOCT00024899001 | |
| 36061 chr10 manual_curation CDS 2721117 2721176 . + 0 Parent=GSCOCT00024899001 | |
| 36062 chr10 manual_curation CDS 2721864 2721978 . + 0 Parent=GSCOCT00024899001 | |
| 36063 chr10 manual_curation CDS 2723064 2723179 . + 1 Parent=GSCOCT00024899001 | |
| 36064 chr10 manual_curation CDS 2723349 2723473 . + 0 Parent=GSCOCT00024899001 | |
| 36065 chr10 manual_curation CDS 2723754 2723877 . + 2 Parent=GSCOCT00024899001 | |
| 36066 chr10 manual_curation gene 2724463 2726961 . - . ID=GSCOCG00024900001;Name=Cc10_g03670 | |
| 36067 chr10 manual_curation mRNA 2724463 2726961 . - . ID=GSCOCT00024900001;Parent=GSCOCG00024900001;Name=Cc10_g03670 | |
| 36068 chr10 manual_curation polypeptide 2724724 2726697 . - . ID=GSCOCP00024900001;Dbxref=InterPro:IPR003340,PFAM:PF02362,PROFILE:PS50863,SwissProt:Q10GM4,SwissProt:Q2QMT2,SwissProt:Q8RYD1,TAIR:AT1G49480.1,TAIR:AT3G18990.1,TAIR:AT4G33280.1,TrEMBL:B9MVI7,TrEMBL:B9R7J9,TrEMBL:B9R7K0;Derives_from=GSCOCT00024900001;Name=Cc10_g03670;Ontology_term=CC_evidence_code:ISS,GO:0003677,CC_EC_number:missing_EC_number,PRODUCT:Putative B3 domain-containing protein REM16,CC_functional_completeness:complete,CC_gene:REM16,CC_gene:Os03g0622100,CC_gene:Os12g0592300;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024900001~ Putative B3 domain-containing protein REM16~ REM16~ complete;original_location=complement(join(2726584..2726697%2C2725556..2726000%2C2725168..2725328%2C2724724..2725041));owner=coffea | |
| 36069 chr10 manual_curation exon 2726886 2726961 . - . Parent=GSCOCT00024900001 | |
| 36070 chr10 manual_curation exon 2724463 2725041 . - . Parent=GSCOCT00024900001 | |
| 36071 chr10 manual_curation exon 2725168 2725328 . - . Parent=GSCOCT00024900001 | |
| 36072 chr10 manual_curation exon 2725556 2726000 . - . Parent=GSCOCT00024900001 | |
| 36073 chr10 manual_curation exon 2726584 2726729 . - . Parent=GSCOCT00024900001 | |
| 36074 chr10 manual_curation CDS 2724724 2725041 . - 0 Parent=GSCOCT00024900001 | |
| 36075 chr10 manual_curation CDS 2725168 2725328 . - 1 Parent=GSCOCT00024900001 | |
| 36076 chr10 manual_curation CDS 2725556 2726000 . - 0 Parent=GSCOCT00024900001 | |
| 36077 chr10 manual_curation CDS 2726584 2726697 . - 0 Parent=GSCOCT00024900001 | |
| 36078 chr10 manual_curation gene 2727885 2733584 . - . ID=GSCOCG00024901001;Name=Cc10_g03680 | |
| 36079 chr10 manual_curation mRNA 2727885 2733584 . - . ID=GSCOCT00024901001;Parent=GSCOCG00024901001;Name=Cc10_g03680 | |
| 36080 chr10 manual_curation polypeptide 2729141 2733283 . - . ID=GSCOCP00024901001;Dbxref=InterPro:IPR003340,PFAM:PF02362,PROFILE:PS50863,SwissProt:Q2R9D2,SwissProt:Q6AV22,SwissProt:Q8S2E6,TAIR:AT3G06160.2,TAIR:AT3G06220.1,TAIR:AT4G34400.1,TrEMBL:B9MVI8,TrEMBL:E0CPD4,TrEMBL:G7I4K0;Derives_from=GSCOCT00024901001;Name=Cc10_g03680;Ontology_term=CC_evidence_code:ISS,GO:0003677,CC_EC_number:missing_EC_number,PRODUCT:Putative B3 domain-containing protein Os01g0723500,CC_functional_completeness:modules,CC_gene:Os01g0723500,CC_gene:Os11g0197600,CC_gene:Os03g0619600;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024901001~ Putative B3 domain-containing protein Os01g0723500~ Os01g0723500~ modules;original_location=complement(join(2733218..2733283%2C2731487..2732063%2C2731027..2731172%2C2730016..2730472%2C2729737..2729903%2C2729141..2729440));owner=coffea | |
| 36081 chr10 manual_curation exon 2727885 2729440 . - . Parent=GSCOCT00024901001 | |
| 36082 chr10 manual_curation exon 2729737 2729903 . - . Parent=GSCOCT00024901001 | |
| 36083 chr10 manual_curation exon 2730016 2730472 . - . Parent=GSCOCT00024901001 | |
| 36084 chr10 manual_curation exon 2731027 2731172 . - . Parent=GSCOCT00024901001 | |
| 36085 chr10 manual_curation exon 2731487 2732063 . - . Parent=GSCOCT00024901001 | |
| 36086 chr10 manual_curation exon 2733218 2733584 . - . Parent=GSCOCT00024901001 | |
| 36087 chr10 manual_curation CDS 2729141 2729440 . - 0 Parent=GSCOCT00024901001 | |
| 36088 chr10 manual_curation CDS 2729737 2729903 . - 1 Parent=GSCOCT00024901001 | |
| 36089 chr10 manual_curation CDS 2730016 2730472 . - 0 Parent=GSCOCT00024901001 | |
| 36090 chr10 manual_curation CDS 2731027 2731172 . - 1 Parent=GSCOCT00024901001 | |
| 36091 chr10 manual_curation CDS 2731487 2732063 . - 0 Parent=GSCOCT00024901001 | |
| 36092 chr10 manual_curation CDS 2733218 2733283 . - 0 Parent=GSCOCT00024901001 | |
| 36093 chr10 manual_curation gene 2738526 2741393 . - . ID=GSCOCG00024903001;Name=Cc10_g03690 | |
| 36094 chr10 manual_curation mRNA 2738526 2741393 . - . ID=GSCOCT00024903001;Parent=GSCOCG00024903001;Name=Cc10_g03690 | |
| 36095 chr10 manual_curation polypeptide 2738526 2741393 . - . ID=GSCOCP00024903001;Dbxref=GENE3D:G3DSA:3.40.640.10,InterPro:IPR015421,InterPro:IPR015424,SUPERFAMILY:SSF53383,SwissProt:Q16P90,SwissProt:Q8LGM7,SwissProt:Q9C5X8,TAIR:AT2G23520.1,TAIR:AT4G37100.1,TAIR:AT5G66950.1,TrEMBL:A5AMA2,TrEMBL:B9S8P3,TrEMBL:F6H1F2;Derives_from=GSCOCT00024903001;Name=Cc10_g03690;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0030170,CC_EC_number:missing_EC_number,PRODUCT:Pyridoxal phosphate (PLP)-dependent transferases superfamily protein,CC_functional_completeness:complete,CC_gene:ABA3,CC_gene:FLACCA,CC_gene:mal3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024903001~ Pyridoxal phosphate (PLP)-dependent transferases superfamily protein~ ABA3~ complete;original_location=complement(2738526..2741393);owner=coffea | |
| 36096 chr10 manual_curation exon 2738526 2741393 . - . Parent=GSCOCT00024903001 | |
| 36097 chr10 manual_curation CDS 2738526 2741393 . - 0 Parent=GSCOCT00024903001 | |
| 36098 chr10 manual_curation gene 2748006 2749760 . + . ID=GSCOCG00024905001;Name=Cc10_g03700 | |
| 36099 chr10 manual_curation mRNA 2748006 2749760 . + . ID=GSCOCT00024905001;Parent=GSCOCG00024905001;Name=Cc10_g03700 | |
| 36100 chr10 manual_curation polypeptide 2748006 2749760 . + . ID=GSCOCP00024905001;Dbxref=InterPro:IPR001611,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SwissProt:O81765,SwissProt:Q9LJ64,SwissProt:Q9XIL9,TAIR:AT2G15880.1,TAIR:AT3G19020.1,TAIR:AT4G33970.1,TrEMBL:B9HRV2,TrEMBL:D7L584,TrEMBL:D7L970;Derives_from=GSCOCT00024905001;Name=Cc10_g03700;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:3.1.3.16,PRODUCT:Pollen-specific leucine-rich repeat extensin-like protein 4,CC_functional_completeness:fragment,CC_gene:PEX3,CC_gene:PEX1,CC_gene:PEX4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024905001~ Pollen-specific leucine-rich repeat extensin-like protein 4~ PEX3~ fragment;original_location=join(2748006..2749157%2C2749230..2749760);owner=coffea | |
| 36101 chr10 manual_curation exon 2748006 2749157 . + . Parent=GSCOCT00024905001 | |
| 36102 chr10 manual_curation exon 2749230 2749760 . + . Parent=GSCOCT00024905001 | |
| 36103 chr10 manual_curation CDS 2748006 2749157 . + 0 Parent=GSCOCT00024905001 | |
| 36104 chr10 manual_curation CDS 2749230 2749760 . + 0 Parent=GSCOCT00024905001 | |
| 36105 chr10 manual_curation gene 2778338 2782055 . + . ID=GSCOCG00024907001;Name=Cc10_g03710 | |
| 36106 chr10 manual_curation mRNA 2778338 2782055 . + . ID=GSCOCT00024907001;Parent=GSCOCG00024907001;Name=Cc10_g03710 | |
| 36107 chr10 manual_curation polypeptide 2778628 2781963 . + . ID=GSCOCP00024907001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:O64635,SwissProt:O64636,SwissProt:Q93ZB2,TAIR:AT2G45550.1,TAIR:AT2G45560.1,TAIR:AT5G25900.1,TrEMBL:D0Q1D3,TrEMBL:D0Q1D4,TrEMBL:E0CPD1;Derives_from=GSCOCT00024907001;Name=Cc10_g03710;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.78,PRODUCT:Ent-kaurene oxidase%2C chloroplastic,CC_functional_completeness:complete,CC_gene:KO1,CC_gene:CYP76C1,CC_gene:CYP76C4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024907001~ Ent-kaurene oxidase%2C chloroplastic~ KO1~ complete;original_location=join(2778628..2778784%2C2779100..2779260%2C2780247..2780408%2C2780519..2780659%2C2780752..2781006%2C2781112..2781273%2C2781360..2781554%2C2781652..2781963);owner=coffea | |
| 36108 chr10 manual_curation exon 2778338 2778784 . + . Parent=GSCOCT00024907001 | |
| 36109 chr10 manual_curation exon 2779100 2779260 . + . Parent=GSCOCT00024907001 | |
| 36110 chr10 manual_curation exon 2780247 2780408 . + . Parent=GSCOCT00024907001 | |
| 36111 chr10 manual_curation exon 2780519 2780659 . + . Parent=GSCOCT00024907001 | |
| 36112 chr10 manual_curation exon 2780752 2781006 . + . Parent=GSCOCT00024907001 | |
| 36113 chr10 manual_curation exon 2781112 2781273 . + . Parent=GSCOCT00024907001 | |
| 36114 chr10 manual_curation exon 2781360 2781554 . + . Parent=GSCOCT00024907001 | |
| 36115 chr10 manual_curation exon 2781652 2782055 . + . Parent=GSCOCT00024907001 | |
| 36116 chr10 manual_curation CDS 2778628 2778784 . + 0 Parent=GSCOCT00024907001 | |
| 36117 chr10 manual_curation CDS 2779100 2779260 . + 1 Parent=GSCOCT00024907001 | |
| 36118 chr10 manual_curation CDS 2780247 2780408 . + 0 Parent=GSCOCT00024907001 | |
| 36119 chr10 manual_curation CDS 2780519 2780659 . + 0 Parent=GSCOCT00024907001 | |
| 36120 chr10 manual_curation CDS 2780752 2781006 . + 0 Parent=GSCOCT00024907001 | |
| 36121 chr10 manual_curation CDS 2781112 2781273 . + 0 Parent=GSCOCT00024907001 | |
| 36122 chr10 manual_curation CDS 2781360 2781554 . + 0 Parent=GSCOCT00024907001 | |
| 36123 chr10 manual_curation CDS 2781652 2781963 . + 0 Parent=GSCOCT00024907001 | |
| 36124 chr10 manual_curation gene 2787475 2788311 . + . ID=GSCOCG00024909001;Name=Cc10_g03720 | |
| 36125 chr10 manual_curation mRNA 2787475 2788311 . + . ID=GSCOCT00024909001;Parent=GSCOCG00024909001;Name=Cc10_g03720 | |
| 36126 chr10 manual_curation polypeptide 2787475 2788311 . + . ID=GSCOCP00024909001;Dbxref=InterPro:IPR003851,PFAM:PF02701,PRODOM:PD007478,PROFILE:PS50884,PROSITE:PS01361,SwissProt:O82155,SwissProt:Q84TE9,SwissProt:Q9M1E6,TAIR:AT1G51700.1,TAIR:AT3G45610.1,TAIR:AT5G60200.1,TrEMBL:B9HEE8,TrEMBL:F6H1E9,TrEMBL:I1JCV8;Derives_from=GSCOCT00024909001;Name=Cc10_g03720;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0008270,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative Predicted protein,CC_functional_completeness:complete,CC_gene:DOF5.3,CC_gene:DOF1.7,CC_gene:DOF3.2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024909001~ Putative Predicted protein~ DOF5.3~ complete;original_location=join(2787475..2787817%2C2788016..2788311);owner=coffea | |
| 36127 chr10 manual_curation exon 2787475 2787817 . + . Parent=GSCOCT00024909001 | |
| 36128 chr10 manual_curation exon 2788016 2788311 . + . Parent=GSCOCT00024909001 | |
| 36129 chr10 manual_curation CDS 2787475 2787817 . + 0 Parent=GSCOCT00024909001 | |
| 36130 chr10 manual_curation CDS 2788016 2788311 . + 1 Parent=GSCOCT00024909001 | |
| 36131 chr10 manual_curation gene 2793411 2797512 . - . ID=GSCOCG00024910001;Name=Cc10_g03730 | |
| 36132 chr10 manual_curation mRNA 2793411 2797512 . - . ID=GSCOCT00024910001;Parent=GSCOCG00024910001;Name=Cc10_g03730 | |
| 36133 chr10 manual_curation polypeptide 2793959 2797396 . - . ID=GSCOCP00024910001;Dbxref=InterPro:IPR013057,PFAM:PF01490,SwissProt:Q84WE9,SwissProt:Q9LRB5,SwissProt:Q9SX98,TAIR:AT1G24400.1,TAIR:AT1G47670.1,TAIR:AT4G35180.1,TrEMBL:B9MVJ1,TrEMBL:B9R7J3,TrEMBL:E0CPD0;Derives_from=GSCOCT00024910001;Name=Cc10_g03730;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Lysine histidine transporter-like 8,CC_functional_completeness:complete,CC_gene:AATL1,CC_gene:At4g35180,CC_gene:LHT2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024910001~ Lysine histidine transporter-like 8~ AATL1~ complete;original_location=complement(join(2797005..2797396%2C2795601..2795734%2C2794844..2795271%2C2794594..2794725%2C2793959..2794444));owner=coffea | |
| 36134 chr10 manual_curation exon 2793411 2794444 . - . Parent=GSCOCT00024910001 | |
| 36135 chr10 manual_curation exon 2794594 2794725 . - . Parent=GSCOCT00024910001 | |
| 36136 chr10 manual_curation exon 2794844 2795271 . - . Parent=GSCOCT00024910001 | |
| 36137 chr10 manual_curation exon 2795601 2795734 . - . Parent=GSCOCT00024910001 | |
| 36138 chr10 manual_curation exon 2797005 2797512 . - . Parent=GSCOCT00024910001 | |
| 36139 chr10 manual_curation CDS 2793959 2794444 . - 0 Parent=GSCOCT00024910001 | |
| 36140 chr10 manual_curation CDS 2794594 2794725 . - 0 Parent=GSCOCT00024910001 | |
| 36141 chr10 manual_curation CDS 2794844 2795271 . - 1 Parent=GSCOCT00024910001 | |
| 36142 chr10 manual_curation CDS 2795601 2795734 . - 2 Parent=GSCOCT00024910001 | |
| 36143 chr10 manual_curation CDS 2797005 2797396 . - 0 Parent=GSCOCT00024910001 | |
| 36144 chr10 manual_curation gene 2807805 2811477 . + . ID=GSCOCG00024911001;Name=Cc10_g03740 | |
| 36145 chr10 manual_curation mRNA 2807805 2811477 . + . ID=GSCOCT00024911001;Parent=GSCOCG00024911001;Name=Cc10_g03740 | |
| 36146 chr10 manual_curation polypeptide 2808880 2810921 . + . ID=GSCOCP00024911001;Dbxref=GENE3D:G3DSA:2.10.109.10,InterPro:IPR000223,InterPro:IPR011056,InterPro:IPR015927,InterPro:IPR019533,InterPro:IPR019758,PFAM:PF10502,PRINTS:PR00727,PROSITE:PS00761,SUPERFAMILY:SSF51306,SwissProt:O04348,SwissProt:Q8H0W1,SwissProt:Q9M9Z2,TAIR:AT1G06870.1,TAIR:AT2G30440.1,TAIR:AT3G24590.1,TIGRFAMs:TIGR02227,TrEMBL:A5AT48,TrEMBL:B9MVJ2,TrEMBL:E0CPC9;Derives_from=GSCOCT00024911001;Name=Cc10_g03740;Ontology_term=CC_evidence_code:ISS,GO:0006508,GO:0008236,GO:0016020,GO:0016021,CC_EC_number:3.4.21.89,PRODUCT:Thylakoidal processing peptidase 1%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:TPP1,CC_gene:TPP2,CC_gene:PLSP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024911001~ Thylakoidal processing peptidase 1%2C chloroplastic~ TPP1~ fragment;original_location=join(2808880..2808924%2C2809848..2809916%2C2810008..2810076%2C2810170..2810256%2C2810372..2810439%2C2810801..2810921);owner=coffea | |
| 36147 chr10 manual_curation exon 2807805 2808924 . + . Parent=GSCOCT00024911001 | |
| 36148 chr10 manual_curation exon 2809848 2809916 . + . Parent=GSCOCT00024911001 | |
| 36149 chr10 manual_curation exon 2810008 2810076 . + . Parent=GSCOCT00024911001 | |
| 36150 chr10 manual_curation exon 2810170 2810256 . + . Parent=GSCOCT00024911001 | |
| 36151 chr10 manual_curation exon 2810372 2810439 . + . Parent=GSCOCT00024911001 | |
| 36152 chr10 manual_curation exon 2810801 2811477 . + . Parent=GSCOCT00024911001 | |
| 36153 chr10 manual_curation CDS 2808880 2808924 . + 0 Parent=GSCOCT00024911001 | |
| 36154 chr10 manual_curation CDS 2809848 2809916 . + 0 Parent=GSCOCT00024911001 | |
| 36155 chr10 manual_curation CDS 2810008 2810076 . + 0 Parent=GSCOCT00024911001 | |
| 36156 chr10 manual_curation CDS 2810170 2810256 . + 0 Parent=GSCOCT00024911001 | |
| 36157 chr10 manual_curation CDS 2810372 2810439 . + 0 Parent=GSCOCT00024911001 | |
| 36158 chr10 manual_curation CDS 2810801 2810921 . + 2 Parent=GSCOCT00024911001 | |
| 36159 chr10 manual_curation gene 2812593 2815408 . + . ID=GSCOCG00024912001;Name=Cc10_g03750 | |
| 36160 chr10 manual_curation mRNA 2812593 2815408 . + . ID=GSCOCT00024912001;Parent=GSCOCG00024912001;Name=Cc10_g03750 | |
| 36161 chr10 manual_curation polypeptide 2812823 2814501 . + . ID=GSCOCP00024912001;Dbxref=TAIR:AT1G47310.1,TAIR:AT5G64510.1,TrEMBL:B9MVJ3,TrEMBL:B9R7J2,TrEMBL:Q8LFZ2;Derives_from=GSCOCT00024912001;Name=Cc10_g03750;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024912001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(2812823..2813071%2C2813162..2813482%2C2814236..2814415%2C2814493..2814501);owner=coffea | |
| 36162 chr10 manual_curation exon 2812593 2813071 . + . Parent=GSCOCT00024912001 | |
| 36163 chr10 manual_curation exon 2813162 2813482 . + . Parent=GSCOCT00024912001 | |
| 36164 chr10 manual_curation exon 2814236 2814415 . + . Parent=GSCOCT00024912001 | |
| 36165 chr10 manual_curation exon 2814493 2815408 . + . Parent=GSCOCT00024912001 | |
| 36166 chr10 manual_curation CDS 2812823 2813071 . + 0 Parent=GSCOCT00024912001 | |
| 36167 chr10 manual_curation CDS 2813162 2813482 . + 0 Parent=GSCOCT00024912001 | |
| 36168 chr10 manual_curation CDS 2814236 2814415 . + 0 Parent=GSCOCT00024912001 | |
| 36169 chr10 manual_curation CDS 2814493 2814501 . + 0 Parent=GSCOCT00024912001 | |
| 36170 chr10 manual_curation gene 2815982 2819047 . - . ID=GSCOCG00024913001;Name=Cc10_g03760 | |
| 36171 chr10 manual_curation mRNA 2815982 2819047 . - . ID=GSCOCT00024913001;Parent=GSCOCG00024913001;Name=Cc10_g03760 | |
| 36172 chr10 manual_curation polypeptide 2815982 2819047 . - . ID=GSCOCP00024913001;Dbxref=InterPro:IPR000109,InterPro:IPR016196,PFAM:PF00854,SUPERFAMILY:SSF103473,SwissProt:Q8H157,SwissProt:Q8VYE4,SwissProt:Q93VV5,TAIR:AT1G27040.1,TAIR:AT1G59740.1,TAIR:AT1G69850.1,TrEMBL:B9MVJ4,TrEMBL:E0CPC8,TrEMBL:I1JTG2;Derives_from=GSCOCT00024913001;Name=Cc10_g03760;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006857,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable peptide/nitrate transporter At1g27040,CC_functional_completeness:complete,CC_gene:At1g27040,CC_gene:NRT1.2,CC_gene:At1g59740;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024913001~ Putative Probable peptide/nitrate transporter At1g27040~ At1g27040~ complete;original_location=complement(join(2819026..2819047%2C2818808..2818906%2C2818431..2818648%2C2817153..2817599%2C2816932..2817062%2C2815982..2816843));owner=coffea | |
| 36173 chr10 manual_curation exon 2815982 2816843 . - . Parent=GSCOCT00024913001 | |
| 36174 chr10 manual_curation exon 2816932 2817062 . - . Parent=GSCOCT00024913001 | |
| 36175 chr10 manual_curation exon 2817153 2817599 . - . Parent=GSCOCT00024913001 | |
| 36176 chr10 manual_curation exon 2818431 2818648 . - . Parent=GSCOCT00024913001 | |
| 36177 chr10 manual_curation exon 2818808 2818906 . - . Parent=GSCOCT00024913001 | |
| 36178 chr10 manual_curation exon 2819026 2819047 . - . Parent=GSCOCT00024913001 | |
| 36179 chr10 manual_curation CDS 2815982 2816843 . - 2 Parent=GSCOCT00024913001 | |
| 36180 chr10 manual_curation CDS 2816932 2817062 . - 0 Parent=GSCOCT00024913001 | |
| 36181 chr10 manual_curation CDS 2817153 2817599 . - 0 Parent=GSCOCT00024913001 | |
| 36182 chr10 manual_curation CDS 2818431 2818648 . - 1 Parent=GSCOCT00024913001 | |
| 36183 chr10 manual_curation CDS 2818808 2818906 . - 1 Parent=GSCOCT00024913001 | |
| 36184 chr10 manual_curation CDS 2819026 2819047 . - 0 Parent=GSCOCT00024913001 | |
| 36185 chr10 manual_curation gene 2822087 2825384 . - . ID=GSCOCG00024914001;Name=Cc10_g03770 | |
| 36186 chr10 manual_curation mRNA 2822087 2825384 . - . ID=GSCOCT00024914001;Parent=GSCOCG00024914001;Name=Cc10_g03770 | |
| 36187 chr10 manual_curation polypeptide 2822281 2824336 . - . ID=GSCOCP00024914001;Dbxref=InterPro:IPR001810,InterPro:IPR006566,InterPro:IPR013596,InterPro:IPR022364,PFAM:PF00646,PFAM:PF08387,PROFILE:PS50181,SMART:SM00256,SMART:SM00579,SUPERFAMILY:SSF81383,SwissProt:Q501E9,SwissProt:Q6NKX3,SwissProt:Q9LXQ8,TAIR:AT3G51530.1,TAIR:AT3G58860.1,TAIR:AT3G58940.1,TrEMBL:B9RAY0,TrEMBL:B9RI98,TrEMBL:G7JLF9;Derives_from=GSCOCT00024914001;Name=Cc10_g03770;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative F-box/LRR-repeat protein At3g58940,CC_functional_completeness:fragment,CC_gene:At3g58940,CC_gene:At3g51530,CC_gene:At2g04230;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024914001~ Putative F-box/LRR-repeat protein At3g58940~ At3g58940~ fragment;original_location=complement(join(2824292..2824336%2C2823475..2824173%2C2823244..2823381%2C2822978..2823121%2C2822281..2822604));owner=coffea | |
| 36188 chr10 manual_curation exon 2825245 2825384 . - . Parent=GSCOCT00024914001 | |
| 36189 chr10 manual_curation exon 2822087 2822604 . - . Parent=GSCOCT00024914001 | |
| 36190 chr10 manual_curation exon 2822978 2823121 . - . Parent=GSCOCT00024914001 | |
| 36191 chr10 manual_curation exon 2823244 2823381 . - . Parent=GSCOCT00024914001 | |
| 36192 chr10 manual_curation exon 2823475 2824173 . - . Parent=GSCOCT00024914001 | |
| 36193 chr10 manual_curation exon 2824292 2824366 . - . Parent=GSCOCT00024914001 | |
| 36194 chr10 manual_curation CDS 2822281 2822604 . - 0 Parent=GSCOCT00024914001 | |
| 36195 chr10 manual_curation CDS 2822978 2823121 . - 0 Parent=GSCOCT00024914001 | |
| 36196 chr10 manual_curation CDS 2823244 2823381 . - 0 Parent=GSCOCT00024914001 | |
| 36197 chr10 manual_curation CDS 2823475 2824173 . - 0 Parent=GSCOCT00024914001 | |
| 36198 chr10 manual_curation CDS 2824292 2824336 . - 0 Parent=GSCOCT00024914001 | |
| 36199 chr10 manual_curation gene 2830183 2831231 . + . ID=GSCOCG00024915001;Name=Cc10_g03780 | |
| 36200 chr10 manual_curation mRNA 2830183 2831231 . + . ID=GSCOCT00024915001;Parent=GSCOCG00024915001;Name=Cc10_g03780 | |
| 36201 chr10 manual_curation polypeptide 2830183 2831081 . + . ID=GSCOCP00024915001;Dbxref=InterPro:IPR000215,InterPro:IPR015554,PANTHER:PTHR11461,PANTHER:PTHR11461:SF24,PFAM:PF00079,SUPERFAMILY:SSF56574,SwissProt:P93692,SwissProt:Q9S7T8,SwissProt:Q9ST58,TAIR:AT1G47710.1,TAIR:AT2G25240.1,TAIR:AT3G45220.1,TrEMBL:A5AT46,TrEMBL:F6H1E8,TrEMBL:Q8GT65;Derives_from=GSCOCT00024915001;Name=Cc10_g03780;Ontology_term=CC_evidence_code:ISS,GO:0004867,CC_EC_number:missing_EC_number,PRODUCT:Serpin-ZX,CC_functional_completeness:fragment,CC_gene:At1g47710;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024915001~ Serpin-ZX~ At1g47710~ fragment;original_location=join(2830183..2830572%2C2830947..2831081);owner=coffea | |
| 36202 chr10 manual_curation exon 2830183 2830572 . + . Parent=GSCOCT00024915001 | |
| 36203 chr10 manual_curation exon 2830947 2831231 . + . Parent=GSCOCT00024915001 | |
| 36204 chr10 manual_curation CDS 2830183 2830572 . + 0 Parent=GSCOCT00024915001 | |
| 36205 chr10 manual_curation CDS 2830947 2831081 . + 0 Parent=GSCOCT00024915001 | |
| 36206 chr10 manual_curation gene 2834797 2837623 . + . ID=GSCOCG00024917001;Name=Cc10_g03790 | |
| 36207 chr10 manual_curation mRNA 2834797 2837623 . + . ID=GSCOCT00024917001;Parent=GSCOCG00024917001;Name=Cc10_g03790 | |
| 36208 chr10 manual_curation polypeptide 2834868 2837329 . + . ID=GSCOCP00024917001;Dbxref=InterPro:IPR000215,InterPro:IPR015554,PANTHER:PTHR11461,PANTHER:PTHR11461:SF24,PFAM:PF00079,SMART:SM00093,SUPERFAMILY:SSF56574,SwissProt:Q40066,SwissProt:Q75H81,SwissProt:Q9S7T8,TAIR:AT1G47710.1,TAIR:AT2G25240.1,TAIR:AT3G45220.1,TrEMBL:A5AT46,TrEMBL:B9R7I8,TrEMBL:Q8GT65;Derives_from=GSCOCT00024917001;Name=Cc10_g03790;Ontology_term=CC_evidence_code:ISS,GO:0004867,CC_EC_number:missing_EC_number,PRODUCT:Serpin-ZX,CC_functional_completeness:complete,CC_gene:At1g47710,CC_gene:PAZX,CC_gene:Os03g0610650;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024917001~ Serpin-ZX~ At1g47710~ complete;original_location=join(2834868..2835257%2C2836547..2837329);owner=coffea | |
| 36209 chr10 manual_curation exon 2834797 2835257 . + . Parent=GSCOCT00024917001 | |
| 36210 chr10 manual_curation exon 2836547 2837623 . + . Parent=GSCOCT00024917001 | |
| 36211 chr10 manual_curation CDS 2834868 2835257 . + 0 Parent=GSCOCT00024917001 | |
| 36212 chr10 manual_curation CDS 2836547 2837329 . + 0 Parent=GSCOCT00024917001 | |
| 36213 chr10 manual_curation gene 2843567 2849906 . + . ID=GSCOCG00024918001;Name=Cc10_g03800 | |
| 36214 chr10 manual_curation mRNA 2843567 2849906 . + . ID=GSCOCT00024918001;Parent=GSCOCG00024918001;Name=Cc10_g03800 | |
| 36215 chr10 manual_curation polypeptide 2844064 2849359 . + . ID=GSCOCP00024918001;Dbxref=InterPro:IPR006043,PANTHER:PTHR11119,PFAM:PF00860,SwissProt:Q8GZD4,SwissProt:Q94C70,SwissProt:Q9SHZ3,TAIR:AT2G05760.1,TAIR:AT2G26510.1,TAIR:AT2G34190.1,TrEMBL:E0CPC6,TrEMBL:I1M8I3,TrEMBL:I1MXS3;Derives_from=GSCOCT00024918001;Name=Cc10_g03800;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006810,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Nucleobase-ascorbate transporter 3,CC_functional_completeness:complete,CC_gene:NAT3,CC_gene:NAT1,CC_gene:NAT2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024918001~ Nucleobase-ascorbate transporter 3~ NAT3~ complete;original_location=join(2844064..2844217%2C2844700..2844797%2C2844894..2845070%2C2845992..2846092%2C2846224..2846299%2C2846401..2846460%2C2846539..2846723%2C2846798..2846894%2C2847171..2847257%2C2847394..2847452%2C2848157..2848248%2C2848363..2848440%2C2848531..2848691%2C2849141..2849359);owner=coffea | |
| 36216 chr10 manual_curation exon 2843567 2844217 . + . Parent=GSCOCT00024918001 | |
| 36217 chr10 manual_curation exon 2844700 2844797 . + . Parent=GSCOCT00024918001 | |
| 36218 chr10 manual_curation exon 2844894 2845070 . + . Parent=GSCOCT00024918001 | |
| 36219 chr10 manual_curation exon 2845992 2846092 . + . Parent=GSCOCT00024918001 | |
| 36220 chr10 manual_curation exon 2846224 2846299 . + . Parent=GSCOCT00024918001 | |
| 36221 chr10 manual_curation exon 2846401 2846460 . + . Parent=GSCOCT00024918001 | |
| 36222 chr10 manual_curation exon 2846539 2846723 . + . Parent=GSCOCT00024918001 | |
| 36223 chr10 manual_curation exon 2846798 2846894 . + . Parent=GSCOCT00024918001 | |
| 36224 chr10 manual_curation exon 2847171 2847257 . + . Parent=GSCOCT00024918001 | |
| 36225 chr10 manual_curation exon 2847394 2847452 . + . Parent=GSCOCT00024918001 | |
| 36226 chr10 manual_curation exon 2848157 2848248 . + . Parent=GSCOCT00024918001 | |
| 36227 chr10 manual_curation exon 2848363 2848440 . + . Parent=GSCOCT00024918001 | |
| 36228 chr10 manual_curation exon 2848531 2848691 . + . Parent=GSCOCT00024918001 | |
| 36229 chr10 manual_curation exon 2849141 2849906 . + . Parent=GSCOCT00024918001 | |
| 36230 chr10 manual_curation CDS 2844064 2844217 . + 0 Parent=GSCOCT00024918001 | |
| 36231 chr10 manual_curation CDS 2844700 2844797 . + 1 Parent=GSCOCT00024918001 | |
| 36232 chr10 manual_curation CDS 2844894 2845070 . + 0 Parent=GSCOCT00024918001 | |
| 36233 chr10 manual_curation CDS 2845992 2846092 . + 0 Parent=GSCOCT00024918001 | |
| 36234 chr10 manual_curation CDS 2846224 2846299 . + 2 Parent=GSCOCT00024918001 | |
| 36235 chr10 manual_curation CDS 2846401 2846460 . + 0 Parent=GSCOCT00024918001 | |
| 36236 chr10 manual_curation CDS 2846539 2846723 . + 0 Parent=GSCOCT00024918001 | |
| 36237 chr10 manual_curation CDS 2846798 2846894 . + 2 Parent=GSCOCT00024918001 | |
| 36238 chr10 manual_curation CDS 2847171 2847257 . + 0 Parent=GSCOCT00024918001 | |
| 36239 chr10 manual_curation CDS 2847394 2847452 . + 0 Parent=GSCOCT00024918001 | |
| 36240 chr10 manual_curation CDS 2848157 2848248 . + 2 Parent=GSCOCT00024918001 | |
| 36241 chr10 manual_curation CDS 2848363 2848440 . + 1 Parent=GSCOCT00024918001 | |
| 36242 chr10 manual_curation CDS 2848531 2848691 . + 1 Parent=GSCOCT00024918001 | |
| 36243 chr10 manual_curation CDS 2849141 2849359 . + 0 Parent=GSCOCT00024918001 | |
| 36244 chr10 manual_curation gene 2851315 2854799 . - . ID=GSCOCG00024919001;Name=Cc10_g03810 | |
| 36245 chr10 manual_curation mRNA 2851315 2854799 . - . ID=GSCOCT00024919001;Parent=GSCOCG00024919001;Name=Cc10_g03810 | |
| 36246 chr10 manual_curation polypeptide 2851634 2854799 . - . ID=GSCOCP00024919001;Dbxref=InterPro:IPR000767,InterPro:IPR001611,InterPro:IPR002182,InterPro:IPR015766,PANTHER:PTHR23155:SF28,PFAM:PF00560,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q9FW44,SwissProt:Q9LZ25,SwissProt:Q9SZA7,TAIR:AT1G33560.1,TAIR:AT4G33300.1,TAIR:AT5G04720.1,TrEMBL:B9MVJ7,TrEMBL:F2YDV0,TrEMBL:F6H1E7;Derives_from=GSCOCT00024919001;Name=Cc10_g03810;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Probable disease resistance protein At4g33300,CC_functional_completeness:complete,CC_gene:At4g33300,CC_gene:At5g04720,CC_gene:ADR1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024919001~ Probable disease resistance protein At4g33300~ At4g33300~ complete;original_location=complement(join(2854394..2854799%2C2853526..2853920%2C2853085..2853440%2C2852694..2852899%2C2851634..2852466));owner=coffea | |
| 36247 chr10 manual_curation exon 2851315 2852466 . - . Parent=GSCOCT00024919001 | |
| 36248 chr10 manual_curation exon 2852694 2852899 . - . Parent=GSCOCT00024919001 | |
| 36249 chr10 manual_curation exon 2853085 2853440 . - . Parent=GSCOCT00024919001 | |
| 36250 chr10 manual_curation exon 2853526 2853920 . - . Parent=GSCOCT00024919001 | |
| 36251 chr10 manual_curation exon 2854394 2854799 . - . Parent=GSCOCT00024919001 | |
| 36252 chr10 manual_curation CDS 2851634 2852466 . - 1 Parent=GSCOCT00024919001 | |
| 36253 chr10 manual_curation CDS 2852694 2852899 . - 2 Parent=GSCOCT00024919001 | |
| 36254 chr10 manual_curation CDS 2853085 2853440 . - 0 Parent=GSCOCT00024919001 | |
| 36255 chr10 manual_curation CDS 2853526 2853920 . - 1 Parent=GSCOCT00024919001 | |
| 36256 chr10 manual_curation CDS 2854394 2854799 . - 0 Parent=GSCOCT00024919001 | |
| 36257 chr10 manual_curation gene 2867474 2873369 . + . ID=GSCOCG00024922001;Name=Cc10_g03820 | |
| 36258 chr10 manual_curation mRNA 2867474 2873369 . + . ID=GSCOCT00024922001;Parent=GSCOCG00024922001;Name=Cc10_g03820 | |
| 36259 chr10 manual_curation polypeptide 2868433 2872690 . + . ID=GSCOCP00024922001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PRINTS:PR00109,PROFILE:PS50011,PROSITE:PS00107,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:O22040,SwissProt:Q39008,SwissProt:Q9FZ36,TAIR:AT1G53570.1,TAIR:AT1G63700.1,TAIR:AT5G66850.1,TrEMBL:D7MLX1,TrEMBL:D7T5R9,TrEMBL:F6H1E6;Derives_from=GSCOCT00024922001;Name=Cc10_g03820;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:MEKK1,CC_gene:ANP1,CC_gene:ANP2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024922001~ Putative uncharacterized protein~ MEKK1~ complete;original_location=join(2868433..2868458%2C2868698..2869303%2C2869379..2869466%2C2870005..2870067%2C2870163..2870326%2C2870596..2870671%2C2871143..2871202%2C2871286..2871411%2C2871801..2872010%2C2872190..2872290%2C2872414..2872690);owner=coffea | |
| 36260 chr10 manual_curation exon 2867474 2868458 . + . Parent=GSCOCT00024922001 | |
| 36261 chr10 manual_curation exon 2868698 2869303 . + . Parent=GSCOCT00024922001 | |
| 36262 chr10 manual_curation exon 2869379 2869466 . + . Parent=GSCOCT00024922001 | |
| 36263 chr10 manual_curation exon 2870005 2870067 . + . Parent=GSCOCT00024922001 | |
| 36264 chr10 manual_curation exon 2870163 2870326 . + . Parent=GSCOCT00024922001 | |
| 36265 chr10 manual_curation exon 2870596 2870671 . + . Parent=GSCOCT00024922001 | |
| 36266 chr10 manual_curation exon 2871143 2871202 . + . Parent=GSCOCT00024922001 | |
| 36267 chr10 manual_curation exon 2871286 2871411 . + . Parent=GSCOCT00024922001 | |
| 36268 chr10 manual_curation exon 2871801 2872010 . + . Parent=GSCOCT00024922001 | |
| 36269 chr10 manual_curation exon 2872190 2872290 . + . Parent=GSCOCT00024922001 | |
| 36270 chr10 manual_curation exon 2872414 2873369 . + . Parent=GSCOCT00024922001 | |
| 36271 chr10 manual_curation CDS 2868433 2868458 . + 0 Parent=GSCOCT00024922001 | |
| 36272 chr10 manual_curation CDS 2868698 2869303 . + 2 Parent=GSCOCT00024922001 | |
| 36273 chr10 manual_curation CDS 2869379 2869466 . + 2 Parent=GSCOCT00024922001 | |
| 36274 chr10 manual_curation CDS 2870005 2870067 . + 0 Parent=GSCOCT00024922001 | |
| 36275 chr10 manual_curation CDS 2870163 2870326 . + 0 Parent=GSCOCT00024922001 | |
| 36276 chr10 manual_curation CDS 2870596 2870671 . + 2 Parent=GSCOCT00024922001 | |
| 36277 chr10 manual_curation CDS 2871143 2871202 . + 0 Parent=GSCOCT00024922001 | |
| 36278 chr10 manual_curation CDS 2871286 2871411 . + 0 Parent=GSCOCT00024922001 | |
| 36279 chr10 manual_curation CDS 2871801 2872010 . + 0 Parent=GSCOCT00024922001 | |
| 36280 chr10 manual_curation CDS 2872190 2872290 . + 0 Parent=GSCOCT00024922001 | |
| 36281 chr10 manual_curation CDS 2872414 2872690 . + 2 Parent=GSCOCT00024922001 | |
| 36282 chr10 manual_curation gene 2874573 2878353 . + . ID=GSCOCG00024923001;Name=Cc10_g03830 | |
| 36283 chr10 manual_curation mRNA 2874573 2878353 . + . ID=GSCOCT00024923001;Parent=GSCOCG00024923001;Name=Cc10_g03830 | |
| 36284 chr10 manual_curation polypeptide 2874880 2878353 . + . ID=GSCOCP00024923001;Dbxref=InterPro:IPR007259,PANTHER:PTHR19302,PFAM:PF04130,SwissProt:Q8BKN5,SwissProt:Q95K09,SwissProt:Q96RT8,TAIR:AT1G20570.1,TAIR:AT1G80260.1,TrEMBL:A5BBP1,TrEMBL:F6H1E5,TrEMBL:I1K7W7;Derives_from=GSCOCT00024923001;Name=Cc10_g03830;Ontology_term=CC_evidence_code:ISS,GO:0000226,GO:0000922,GO:0005815,CC_EC_number:missing_EC_number,PRODUCT:Spc97 / Spc98 family of spindle pole body (SBP) component,CC_functional_completeness:fragment,CC_gene:TUBGCP5,CC_gene:Tubgcp5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024923001~ Spc97 / Spc98 family of spindle pole body (SBP) component~ TUBGCP5~ fragment;original_location=join(2874880..2874984%2C2875101..2875364%2C2875489..2875586%2C2876025..2876187%2C2876284..2876394%2C2876759..2877703%2C2877789..2877941%2C2878039..2878138%2C2878238..2878353);owner=coffea | |
| 36285 chr10 manual_curation exon 2874573 2874984 . + . Parent=GSCOCT00024923001 | |
| 36286 chr10 manual_curation exon 2875101 2875364 . + . Parent=GSCOCT00024923001 | |
| 36287 chr10 manual_curation exon 2875489 2875586 . + . Parent=GSCOCT00024923001 | |
| 36288 chr10 manual_curation exon 2876025 2876187 . + . Parent=GSCOCT00024923001 | |
| 36289 chr10 manual_curation exon 2876284 2876394 . + . Parent=GSCOCT00024923001 | |
| 36290 chr10 manual_curation exon 2876759 2877703 . + . Parent=GSCOCT00024923001 | |
| 36291 chr10 manual_curation exon 2877789 2877941 . + . Parent=GSCOCT00024923001 | |
| 36292 chr10 manual_curation exon 2878039 2878138 . + . Parent=GSCOCT00024923001 | |
| 36293 chr10 manual_curation exon 2878238 2878353 . + . Parent=GSCOCT00024923001 | |
| 36294 chr10 manual_curation CDS 2874880 2874984 . + 0 Parent=GSCOCT00024923001 | |
| 36295 chr10 manual_curation CDS 2875101 2875364 . + 0 Parent=GSCOCT00024923001 | |
| 36296 chr10 manual_curation CDS 2875489 2875586 . + 0 Parent=GSCOCT00024923001 | |
| 36297 chr10 manual_curation CDS 2876025 2876187 . + 2 Parent=GSCOCT00024923001 | |
| 36298 chr10 manual_curation CDS 2876284 2876394 . + 0 Parent=GSCOCT00024923001 | |
| 36299 chr10 manual_curation CDS 2876759 2877703 . + 0 Parent=GSCOCT00024923001 | |
| 36300 chr10 manual_curation CDS 2877789 2877941 . + 0 Parent=GSCOCT00024923001 | |
| 36301 chr10 manual_curation CDS 2878039 2878138 . + 0 Parent=GSCOCT00024923001 | |
| 36302 chr10 manual_curation CDS 2878238 2878353 . + 1 Parent=GSCOCT00024923001 | |
| 36303 chr10 manual_curation gene 2923706 2927658 . + . ID=GSCOCG00024924001;Name=Cc10_g03840 | |
| 36304 chr10 manual_curation mRNA 2923706 2927658 . + . ID=GSCOCT00024924001;Parent=GSCOCG00024924001;Name=Cc10_g03840 | |
| 36305 chr10 manual_curation polypeptide 2925237 2927292 . + . ID=GSCOCP00024924001;Dbxref=InterPro:IPR001810,InterPro:IPR006566,InterPro:IPR013596,InterPro:IPR022364,PFAM:PF00646,PFAM:PF08387,PROFILE:PS50181,SMART:SM00256,SMART:SM00579,SUPERFAMILY:SSF81383,SwissProt:Q9FNJ4,SwissProt:Q9LXQ8,SwissProt:Q9SZ44,TAIR:AT3G58940.1,TAIR:AT4G27050.1,TAIR:AT5G22670.1,TrEMBL:B9RAY0,TrEMBL:B9RI98,TrEMBL:G7JLF9;Derives_from=GSCOCT00024924001;Name=Cc10_g03840;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative F-box/FBD/LRR-repeat protein At5g22670,CC_functional_completeness:complete,CC_gene:At5g22670,CC_gene:At3g58940,CC_gene:At4g27050;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024924001~ Putative F-box/FBD/LRR-repeat protein At5g22670~ At5g22670~ complete;original_location=join(2925237..2925281%2C2925400..2926329%2C2926452..2926595%2C2926969..2927292);owner=coffea | |
| 36306 chr10 manual_curation exon 2923706 2925281 . + . Parent=GSCOCT00024924001 | |
| 36307 chr10 manual_curation exon 2925400 2926329 . + . Parent=GSCOCT00024924001 | |
| 36308 chr10 manual_curation exon 2926452 2926595 . + . Parent=GSCOCT00024924001 | |
| 36309 chr10 manual_curation exon 2926969 2927658 . + . Parent=GSCOCT00024924001 | |
| 36310 chr10 manual_curation CDS 2925237 2925281 . + 0 Parent=GSCOCT00024924001 | |
| 36311 chr10 manual_curation CDS 2925400 2926329 . + 0 Parent=GSCOCT00024924001 | |
| 36312 chr10 manual_curation CDS 2926452 2926595 . + 0 Parent=GSCOCT00024924001 | |
| 36313 chr10 manual_curation CDS 2926969 2927292 . + 0 Parent=GSCOCT00024924001 | |
| 36314 chr10 manual_curation gene 2931042 2933063 . - . ID=GSCOCG00024925001;Name=Cc10_g03850 | |
| 36315 chr10 manual_curation mRNA 2931042 2933063 . - . ID=GSCOCT00024925001;Parent=GSCOCG00024925001;Name=Cc10_g03850 | |
| 36316 chr10 manual_curation polypeptide 2931367 2932392 . - . ID=GSCOCP00024925001;Dbxref=InterPro:IPR012336,InterPro:IPR013766,PFAM:PF00085,SUPERFAMILY:SSF52833,TAIR:AT5G06430.1,TrEMBL:B9MVK1,TrEMBL:B9R7I1,TrEMBL:E0CPB9;Derives_from=GSCOCT00024925001;Name=Cc10_g03850;Ontology_term=CC_evidence_code:ISS,GO:0045454,CC_EC_number:missing_EC_number,PRODUCT:Thioredoxin superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024925001~ Thioredoxin superfamily protein~ unknown_gene~ complete;original_location=complement(join(2931934..2932392%2C2931367..2931516));owner=coffea | |
| 36317 chr10 manual_curation exon 2932953 2933063 . - . Parent=GSCOCT00024925001 | |
| 36318 chr10 manual_curation exon 2931042 2931516 . - . Parent=GSCOCT00024925001 | |
| 36319 chr10 manual_curation exon 2931934 2932467 . - . Parent=GSCOCT00024925001 | |
| 36320 chr10 manual_curation CDS 2931367 2931516 . - 0 Parent=GSCOCT00024925001 | |
| 36321 chr10 manual_curation CDS 2931934 2932392 . - 0 Parent=GSCOCT00024925001 | |
| 36322 chr10 manual_curation gene 2944872 2945577 . + . ID=GSCOCG00024927001;Name=Cc10_g03860 | |
| 36323 chr10 manual_curation mRNA 2944872 2945577 . + . ID=GSCOCT00024927001;Parent=GSCOCG00024927001;Name=Cc10_g03860 | |
| 36324 chr10 manual_curation polypeptide 2944872 2945577 . + . ID=GSCOCP00024927001;Dbxref=GENE3D:G3DSA:2.60.40.420,InterPro:IPR008972,SUPERFAMILY:SSF49503,TAIR:AT2G15770.1,TAIR:AT2G15780.1,TAIR:AT4G33930.1,TrEMBL:A5AWI3,TrEMBL:A5AWI4,TrEMBL:F6H1E4;Derives_from=GSCOCT00024927001;Name=Cc10_g03860;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024927001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=join(2944872..2945052%2C2945315..2945577);owner=coffea | |
| 36325 chr10 manual_curation exon 2944872 2945052 . + . Parent=GSCOCT00024927001 | |
| 36326 chr10 manual_curation exon 2945315 2945577 . + . Parent=GSCOCT00024927001 | |
| 36327 chr10 manual_curation CDS 2944872 2945052 . + 0 Parent=GSCOCT00024927001 | |
| 36328 chr10 manual_curation CDS 2945315 2945577 . + 1 Parent=GSCOCT00024927001 | |
| 36329 chr10 manual_curation gene 2948506 2949294 . - . ID=GSCOCG00024928001;Name=Cc10_g03870 | |
| 36330 chr10 manual_curation mRNA 2948506 2949294 . - . ID=GSCOCT00024928001;Parent=GSCOCG00024928001;Name=Cc10_g03870 | |
| 36331 chr10 manual_curation polypeptide 2948506 2949294 . - . ID=GSCOCP00024928001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001005,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR014778,InterPro:IPR015495,InterPro:IPR017930,PANTHER:PTHR10641,PFAM:PF00249,PROFILE:PS51294,SMART:SM00717,SUPERFAMILY:SSF46689,SwissProt:P10243,SwissProt:Q08759,SwissProt:Q9FDW1,TAIR:AT3G50060.1,TAIR:AT4G37260.1,TAIR:AT5G67300.1,TrEMBL:B9MVK3,TrEMBL:B9R7I0,TrEMBL:Q9FZ13;Derives_from=GSCOCT00024928001;Name=Cc10_g03870;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:R2r3-myb transcription factor%2C putative,CC_functional_completeness:complete,CC_gene:MYB44,CC_gene:myb,CC_gene:MYBL1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024928001~ R2r3-myb transcription factor%2C putative~ MYB44~ complete;original_location=complement(2948506..2949294);owner=coffea | |
| 36332 chr10 manual_curation exon 2948506 2949294 . - . Parent=GSCOCT00024928001 | |
| 36333 chr10 manual_curation CDS 2948506 2949294 . - 0 Parent=GSCOCT00024928001 | |
| 36334 chr10 manual_curation gene 2959457 2960170 . - . ID=GSCOCG00024929001;Name=Cc10_g03880 | |
| 36335 chr10 manual_curation mRNA 2959457 2960170 . - . ID=GSCOCT00024929001;Parent=GSCOCG00024929001;Name=Cc10_g03880 | |
| 36336 chr10 manual_curation polypeptide 2959457 2960170 . - . ID=GSCOCP00024929001;Dbxref=InterPro:IPR006460,PFAM:PF04759,TAIR:AT2G21990.1,TAIR:AT4G39610.1,TAIR:AT5G42680.1,TIGRFAMs:TIGR01570,TrEMBL:B9GNY5,TrEMBL:B9R7H9,TrEMBL:F6H1E2;Derives_from=GSCOCT00024929001;Name=Cc10_g03880;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function%2C DUF617,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024929001~ Protein of unknown function%2C DUF617~ unknown_gene~ complete;original_location=complement(2959457..2960170);owner=coffea | |
| 36337 chr10 manual_curation exon 2959457 2960170 . - . Parent=GSCOCT00024929001 | |
| 36338 chr10 manual_curation CDS 2959457 2960170 . - 0 Parent=GSCOCT00024929001 | |
| 36339 chr10 manual_curation gene 2973074 2981074 . + . ID=GSCOCG00024930001;Name=Cc10_g03890 | |
| 36340 chr10 manual_curation mRNA 2973074 2981074 . + . ID=GSCOCT00024930001;Parent=GSCOCG00024930001;Name=Cc10_g03890 | |
| 36341 chr10 manual_curation polypeptide 2973331 2980468 . + . ID=GSCOCP00024930001;Dbxref=InterPro:IPR001375,PFAM:PF00326,SwissProt:P34422,SwissProt:P39839,SwissProt:Q8R146,TAIR:AT4G14570.1,TAIR:AT5G36210.1,TrEMBL:B9GNY4,TrEMBL:F6H1E0,TrEMBL:F6H1E1;Derives_from=GSCOCT00024930001;Name=Cc10_g03890;Ontology_term=CC_evidence_code:ISS,GO:0006508,GO:0008236,CC_EC_number:3.4.19.1,PRODUCT:alpha/beta-Hydrolases superfamily protein,CC_functional_completeness:complete,CC_gene:dpf-6,CC_gene:yuxL,CC_gene:Apeh;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024930001~ alpha/beta-Hydrolases superfamily protein~ dpf-6~ complete;original_location=join(2973331..2973497%2C2973641..2973828%2C2974112..2974216%2C2974316..2974387%2C2974572..2974719%2C2975659..2975741%2C2976007..2976062%2C2976642..2976778%2C2976867..2976957%2C2977042..2977107%2C2977219..2977441%2C2978288..2978389%2C2978774..2978859%2C2978950..2979072%2C2979588..2979657%2C2979806..2979897%2C2980173..2980277%2C2980355..2980468);owner=coffea | |
| 36342 chr10 manual_curation exon 2973074 2973497 . + . Parent=GSCOCT00024930001 | |
| 36343 chr10 manual_curation exon 2973641 2973828 . + . Parent=GSCOCT00024930001 | |
| 36344 chr10 manual_curation exon 2974112 2974216 . + . Parent=GSCOCT00024930001 | |
| 36345 chr10 manual_curation exon 2974316 2974387 . + . Parent=GSCOCT00024930001 | |
| 36346 chr10 manual_curation exon 2974572 2974719 . + . Parent=GSCOCT00024930001 | |
| 36347 chr10 manual_curation exon 2975659 2975741 . + . Parent=GSCOCT00024930001 | |
| 36348 chr10 manual_curation exon 2976007 2976062 . + . Parent=GSCOCT00024930001 | |
| 36349 chr10 manual_curation exon 2976642 2976778 . + . Parent=GSCOCT00024930001 | |
| 36350 chr10 manual_curation exon 2976867 2976957 . + . Parent=GSCOCT00024930001 | |
| 36351 chr10 manual_curation exon 2977042 2977107 . + . Parent=GSCOCT00024930001 | |
| 36352 chr10 manual_curation exon 2977219 2977441 . + . Parent=GSCOCT00024930001 | |
| 36353 chr10 manual_curation exon 2978288 2978389 . + . Parent=GSCOCT00024930001 | |
| 36354 chr10 manual_curation exon 2978774 2978859 . + . Parent=GSCOCT00024930001 | |
| 36355 chr10 manual_curation exon 2978950 2979072 . + . Parent=GSCOCT00024930001 | |
| 36356 chr10 manual_curation exon 2979588 2979657 . + . Parent=GSCOCT00024930001 | |
| 36357 chr10 manual_curation exon 2979806 2979897 . + . Parent=GSCOCT00024930001 | |
| 36358 chr10 manual_curation exon 2980173 2980277 . + . Parent=GSCOCT00024930001 | |
| 36359 chr10 manual_curation exon 2980355 2981074 . + . Parent=GSCOCT00024930001 | |
| 36360 chr10 manual_curation CDS 2973331 2973497 . + 0 Parent=GSCOCT00024930001 | |
| 36361 chr10 manual_curation CDS 2973641 2973828 . + 2 Parent=GSCOCT00024930001 | |
| 36362 chr10 manual_curation CDS 2974112 2974216 . + 1 Parent=GSCOCT00024930001 | |
| 36363 chr10 manual_curation CDS 2974316 2974387 . + 1 Parent=GSCOCT00024930001 | |
| 36364 chr10 manual_curation CDS 2974572 2974719 . + 1 Parent=GSCOCT00024930001 | |
| 36365 chr10 manual_curation CDS 2975659 2975741 . + 2 Parent=GSCOCT00024930001 | |
| 36366 chr10 manual_curation CDS 2976007 2976062 . + 1 Parent=GSCOCT00024930001 | |
| 36367 chr10 manual_curation CDS 2976642 2976778 . + 0 Parent=GSCOCT00024930001 | |
| 36368 chr10 manual_curation CDS 2976867 2976957 . + 2 Parent=GSCOCT00024930001 | |
| 36369 chr10 manual_curation CDS 2977042 2977107 . + 0 Parent=GSCOCT00024930001 | |
| 36370 chr10 manual_curation CDS 2977219 2977441 . + 0 Parent=GSCOCT00024930001 | |
| 36371 chr10 manual_curation CDS 2978288 2978389 . + 1 Parent=GSCOCT00024930001 | |
| 36372 chr10 manual_curation CDS 2978774 2978859 . + 1 Parent=GSCOCT00024930001 | |
| 36373 chr10 manual_curation CDS 2978950 2979072 . + 0 Parent=GSCOCT00024930001 | |
| 36374 chr10 manual_curation CDS 2979588 2979657 . + 0 Parent=GSCOCT00024930001 | |
| 36375 chr10 manual_curation CDS 2979806 2979897 . + 1 Parent=GSCOCT00024930001 | |
| 36376 chr10 manual_curation CDS 2980173 2980277 . + 0 Parent=GSCOCT00024930001 | |
| 36377 chr10 manual_curation CDS 2980355 2980468 . + 0 Parent=GSCOCT00024930001 | |
| 36378 chr10 manual_curation gene 2989441 2996824 . + . ID=GSCOCG00024932001;Name=Cc10_g03900 | |
| 36379 chr10 manual_curation mRNA 2989441 2996824 . + . ID=GSCOCT00024932001;Parent=GSCOCG00024932001;Name=Cc10_g03900 | |
| 36380 chr10 manual_curation polypeptide 2989479 2996205 . + . ID=GSCOCP00024932001;Dbxref=InterPro:IPR001375,PFAM:PF00326,SwissProt:P13676,SwissProt:P34422,SwissProt:P39839,TAIR:AT4G14570.1,TAIR:AT5G36210.1,TrEMBL:B9GNY4,TrEMBL:F6H1E0,TrEMBL:F6H1E1;Derives_from=GSCOCT00024932001;Name=Cc10_g03900;Ontology_term=CC_evidence_code:ISS,GO:0006508,GO:0008236,CC_EC_number:3.4.19.1,PRODUCT:alpha/beta-Hydrolases superfamily protein,CC_functional_completeness:complete,CC_gene:dpf-6,CC_gene:yuxL,CC_gene:Apeh;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024932001~ alpha/beta-Hydrolases superfamily protein~ dpf-6~ complete;original_location=join(2989479..2989654%2C2989782..2989969%2C2990325..2990429%2C2990531..2990602%2C2990798..2990945%2C2991435..2991448%2C2991939..2992054%2C2992538..2992674%2C2992778..2992868%2C2992954..2993019%2C2993196..2993418%2C2994123..2994224%2C2994341..2994426%2C2994510..2994632%2C2995189..2995258%2C2995446..2995537%2C2995893..2995997%2C2996092..2996205);owner=coffea | |
| 36381 chr10 manual_curation exon 2989441 2989654 . + . Parent=GSCOCT00024932001 | |
| 36382 chr10 manual_curation exon 2989782 2989969 . + . Parent=GSCOCT00024932001 | |
| 36383 chr10 manual_curation exon 2990325 2990429 . + . Parent=GSCOCT00024932001 | |
| 36384 chr10 manual_curation exon 2990531 2990602 . + . Parent=GSCOCT00024932001 | |
| 36385 chr10 manual_curation exon 2990798 2990945 . + . Parent=GSCOCT00024932001 | |
| 36386 chr10 manual_curation exon 2991435 2991448 . + . Parent=GSCOCT00024932001 | |
| 36387 chr10 manual_curation exon 2991939 2992054 . + . Parent=GSCOCT00024932001 | |
| 36388 chr10 manual_curation exon 2992538 2992674 . + . Parent=GSCOCT00024932001 | |
| 36389 chr10 manual_curation exon 2992778 2992868 . + . Parent=GSCOCT00024932001 | |
| 36390 chr10 manual_curation exon 2992954 2993019 . + . Parent=GSCOCT00024932001 | |
| 36391 chr10 manual_curation exon 2993196 2993418 . + . Parent=GSCOCT00024932001 | |
| 36392 chr10 manual_curation exon 2994123 2994224 . + . Parent=GSCOCT00024932001 | |
| 36393 chr10 manual_curation exon 2994341 2994426 . + . Parent=GSCOCT00024932001 | |
| 36394 chr10 manual_curation exon 2994510 2994632 . + . Parent=GSCOCT00024932001 | |
| 36395 chr10 manual_curation exon 2995189 2995258 . + . Parent=GSCOCT00024932001 | |
| 36396 chr10 manual_curation exon 2995446 2995537 . + . Parent=GSCOCT00024932001 | |
| 36397 chr10 manual_curation exon 2995893 2995997 . + . Parent=GSCOCT00024932001 | |
| 36398 chr10 manual_curation exon 2996092 2996824 . + . Parent=GSCOCT00024932001 | |
| 36399 chr10 manual_curation CDS 2989479 2989654 . + 0 Parent=GSCOCT00024932001 | |
| 36400 chr10 manual_curation CDS 2989782 2989969 . + 2 Parent=GSCOCT00024932001 | |
| 36401 chr10 manual_curation CDS 2990325 2990429 . + 1 Parent=GSCOCT00024932001 | |
| 36402 chr10 manual_curation CDS 2990531 2990602 . + 1 Parent=GSCOCT00024932001 | |
| 36403 chr10 manual_curation CDS 2990798 2990945 . + 1 Parent=GSCOCT00024932001 | |
| 36404 chr10 manual_curation CDS 2991435 2991448 . + 2 Parent=GSCOCT00024932001 | |
| 36405 chr10 manual_curation CDS 2991939 2992054 . + 1 Parent=GSCOCT00024932001 | |
| 36406 chr10 manual_curation CDS 2992538 2992674 . + 0 Parent=GSCOCT00024932001 | |
| 36407 chr10 manual_curation CDS 2992778 2992868 . + 2 Parent=GSCOCT00024932001 | |
| 36408 chr10 manual_curation CDS 2992954 2993019 . + 0 Parent=GSCOCT00024932001 | |
| 36409 chr10 manual_curation CDS 2993196 2993418 . + 0 Parent=GSCOCT00024932001 | |
| 36410 chr10 manual_curation CDS 2994123 2994224 . + 1 Parent=GSCOCT00024932001 | |
| 36411 chr10 manual_curation CDS 2994341 2994426 . + 1 Parent=GSCOCT00024932001 | |
| 36412 chr10 manual_curation CDS 2994510 2994632 . + 0 Parent=GSCOCT00024932001 | |
| 36413 chr10 manual_curation CDS 2995189 2995258 . + 0 Parent=GSCOCT00024932001 | |
| 36414 chr10 manual_curation CDS 2995446 2995537 . + 1 Parent=GSCOCT00024932001 | |
| 36415 chr10 manual_curation CDS 2995893 2995997 . + 0 Parent=GSCOCT00024932001 | |
| 36416 chr10 manual_curation CDS 2996092 2996205 . + 0 Parent=GSCOCT00024932001 | |
| 36417 chr10 manual_curation gene 2998629 3001920 . - . ID=GSCOCG00024934001;Name=Cc10_g03910 | |
| 36418 chr10 manual_curation mRNA 2998629 3001920 . - . ID=GSCOCT00024934001;Parent=GSCOCG00024934001;Name=Cc10_g03910 | |
| 36419 chr10 manual_curation polypeptide 2998629 3001791 . - . ID=GSCOCP00024934001;Dbxref=InterPro:IPR007175,PFAM:PF04032,TAIR:AT5G41270.1,TrEMBL:B9RCB4,TrEMBL:B9SUR0,TrEMBL:G7ZZ49;Derives_from=GSCOCT00024934001;Name=Cc10_g03910;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative CONTAINS InterPro DOMAIN/s,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024934001~ Putative CONTAINS InterPro DOMAIN/s: RNAse P%2C Rpr2/Rpp21 subunit (InterPro:IPR007175)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink).~ unknown_gene~ modules;original_location=complement(join(3001505..3001791%2C3000112..3000626%2C2998629..2998954));owner=coffea | |
| 36420 chr10 manual_curation exon 2998629 2998954 . - . Parent=GSCOCT00024934001 | |
| 36421 chr10 manual_curation exon 3000112 3000626 . - . Parent=GSCOCT00024934001 | |
| 36422 chr10 manual_curation exon 3001505 3001920 . - . Parent=GSCOCT00024934001 | |
| 36423 chr10 manual_curation CDS 2998629 2998954 . - 1 Parent=GSCOCT00024934001 | |
| 36424 chr10 manual_curation CDS 3000112 3000626 . - 2 Parent=GSCOCT00024934001 | |
| 36425 chr10 manual_curation CDS 3001505 3001791 . - 0 Parent=GSCOCT00024934001 | |
| 36426 chr10 manual_curation gene 3003507 3004080 . + . ID=GSCOCG00024936001;Name=Cc10_g03920 | |
| 36427 chr10 manual_curation mRNA 3003507 3004080 . + . ID=GSCOCT00024936001;Parent=GSCOCG00024936001;Name=Cc10_g03920 | |
| 36428 chr10 manual_curation polypeptide 3003507 3003689 . + . ID=GSCOCP00024936001;Derives_from=GSCOCT00024936001;Name=Cc10_g03920;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00024936001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=3003507..3003689;owner=coffea | |
| 36429 chr10 manual_curation exon 3003507 3004080 . + . Parent=GSCOCT00024936001 | |
| 36430 chr10 manual_curation CDS 3003507 3003689 . + 0 Parent=GSCOCT00024936001 | |
| 36431 chr10 manual_curation gene 3011625 3013996 . + . ID=GSCOCG00034998001;Name=Cc10_g03930 | |
| 36432 chr10 manual_curation mRNA 3011625 3013996 . + . ID=GSCOCT00034998001;Parent=GSCOCG00034998001;Name=Cc10_g03930 | |
| 36433 chr10 manual_curation polypeptide 3011625 3013724 . + . ID=GSCOCP00034998001;Dbxref=InterPro:IPR003618,PROFILE:PS51321,TAIR:AT4G11560.1,TrEMBL:B9GKH8,TrEMBL:F6HUC7,TrEMBL:I1KPA5;Derives_from=GSCOCT00034998001;Name=Cc10_g03930;Ontology_term=CC_evidence_code:ISS,GO:0006350,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034998001~ Uncharacterized protein~ unknown_gene~ fragment;original_location=complement(join(6049528..6049577%2C6049308..6049455%2C6048912..6048971%2C6048356..6048442%2C6047478..6047711));owner=coffea | |
| 36434 chr10 manual_curation exon 3013491 3013996 . + . Parent=GSCOCT00034998001 | |
| 36435 chr10 manual_curation exon 3012760 3012846 . + . Parent=GSCOCT00034998001 | |
| 36436 chr10 manual_curation exon 3012231 3012290 . + . Parent=GSCOCT00034998001 | |
| 36437 chr10 manual_curation exon 3011747 3011894 . + . Parent=GSCOCT00034998001 | |
| 36438 chr10 manual_curation exon 3011625 3011674 . + . Parent=GSCOCT00034998001 | |
| 36439 chr10 manual_curation CDS 3013491 3013724 . + 0 Parent=GSCOCT00034998001 | |
| 36440 chr10 manual_curation CDS 3012760 3012846 . + 0 Parent=GSCOCT00034998001 | |
| 36441 chr10 manual_curation CDS 3012231 3012290 . + 0 Parent=GSCOCT00034998001 | |
| 36442 chr10 manual_curation CDS 3011747 3011894 . + 2 Parent=GSCOCT00034998001 | |
| 36443 chr10 manual_curation CDS 3011625 3011674 . + 0 Parent=GSCOCT00034998001 | |
| 36444 chr10 manual_curation gene 3015207 3016827 . - . ID=GSCOCG00034997001;Name=Cc10_g03940 | |
| 36445 chr10 manual_curation mRNA 3015207 3016827 . - . ID=GSCOCT00034997001;Parent=GSCOCG00034997001;Name=Cc10_g03940 | |
| 36446 chr10 manual_curation polypeptide 3015448 3016584 . - . ID=GSCOCP00034997001;Dbxref=InterPro:IPR012442,PFAM:PF07816,TAIR:AT2G15760.1,TAIR:AT2G26530.1,TAIR:AT3G62630.1,TrEMBL:B9GNY3,TrEMBL:B9MVK5,TrEMBL:F6H1D9;Derives_from=GSCOCT00034997001;Name=Cc10_g03940;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of unknown function (DUF1645),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034997001~ Putative Protein of unknown function (DUF1645)~ unknown_gene~ complete;original_location=6044618..6045754;owner=coffea | |
| 36447 chr10 manual_curation exon 3015207 3016827 . - . Parent=GSCOCT00034997001 | |
| 36448 chr10 manual_curation CDS 3015448 3016584 . - 0 Parent=GSCOCT00034997001 | |
| 36449 chr10 manual_curation gene 3028129 3033079 . - . ID=GSCOCG00034996001;Name=Cc10_g03950 | |
| 36450 chr10 manual_curation mRNA 3028129 3033079 . - . ID=GSCOCT00034996001;Parent=GSCOCG00034996001;Name=Cc10_g03950 | |
| 36451 chr10 manual_curation polypeptide 3028458 3032495 . - . ID=GSCOCP00034996001;Dbxref=InterPro:IPR006869,PFAM:PF04784,TAIR:AT2G39690.1,TAIR:AT4G37080.2,TAIR:AT5G42690.2,TrEMBL:B9R7H5,TrEMBL:E0CPB3,TrEMBL:I1M8J1;Derives_from=GSCOCT00034996001;Name=Cc10_g03950;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function%2C DUF547,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034996001~ Protein of unknown function%2C DUF547~ unknown_gene~ complete;original_location=join(6028707..6028769%2C6029319..6029417%2C6029485..6029601%2C6029993..6030248%2C6030370..6030527%2C6030603..6030952%2C6031043..6031142%2C6031368..6031427%2C6031843..6031926%2C6032023..6032139%2C6032439..6032744);owner=coffea | |
| 36452 chr10 manual_curation exon 3032687 3033079 . - . Parent=GSCOCT00034996001 | |
| 36453 chr10 manual_curation exon 3032433 3032527 . - . Parent=GSCOCT00034996001 | |
| 36454 chr10 manual_curation exon 3031785 3031883 . - . Parent=GSCOCT00034996001 | |
| 36455 chr10 manual_curation exon 3031601 3031717 . - . Parent=GSCOCT00034996001 | |
| 36456 chr10 manual_curation exon 3030954 3031209 . - . Parent=GSCOCT00034996001 | |
| 36457 chr10 manual_curation exon 3030675 3030832 . - . Parent=GSCOCT00034996001 | |
| 36458 chr10 manual_curation exon 3030250 3030599 . - . Parent=GSCOCT00034996001 | |
| 36459 chr10 manual_curation exon 3030060 3030159 . - . Parent=GSCOCT00034996001 | |
| 36460 chr10 manual_curation exon 3029775 3029834 . - . Parent=GSCOCT00034996001 | |
| 36461 chr10 manual_curation exon 3029276 3029359 . - . Parent=GSCOCT00034996001 | |
| 36462 chr10 manual_curation exon 3029063 3029179 . - . Parent=GSCOCT00034996001 | |
| 36463 chr10 manual_curation exon 3028129 3028763 . - . Parent=GSCOCT00034996001 | |
| 36464 chr10 manual_curation CDS 3032433 3032495 . - 0 Parent=GSCOCT00034996001 | |
| 36465 chr10 manual_curation CDS 3031785 3031883 . - 0 Parent=GSCOCT00034996001 | |
| 36466 chr10 manual_curation CDS 3031601 3031717 . - 0 Parent=GSCOCT00034996001 | |
| 36467 chr10 manual_curation CDS 3030954 3031209 . - 0 Parent=GSCOCT00034996001 | |
| 36468 chr10 manual_curation CDS 3030675 3030832 . - 1 Parent=GSCOCT00034996001 | |
| 36469 chr10 manual_curation CDS 3030250 3030599 . - 0 Parent=GSCOCT00034996001 | |
| 36470 chr10 manual_curation CDS 3030060 3030159 . - 2 Parent=GSCOCT00034996001 | |
| 36471 chr10 manual_curation CDS 3029775 3029834 . - 0 Parent=GSCOCT00034996001 | |
| 36472 chr10 manual_curation CDS 3029276 3029359 . - 0 Parent=GSCOCT00034996001 | |
| 36473 chr10 manual_curation CDS 3029063 3029179 . - 0 Parent=GSCOCT00034996001 | |
| 36474 chr10 manual_curation CDS 3028458 3028763 . - 0 Parent=GSCOCT00034996001 | |
| 36475 chr10 manual_curation gene 3049363 3052139 . + . ID=GSCOCG00034994001;Name=Cc10_g03960 | |
| 36476 chr10 manual_curation mRNA 3049363 3052139 . + . ID=GSCOCT00034994001;Parent=GSCOCG00034994001;Name=Cc10_g03960 | |
| 36477 chr10 manual_curation polypeptide 3049363 3052139 . + . ID=GSCOCP00034994001;Dbxref=InterPro:IPR001563,InterPro:IPR018202,PANTHER:PTHR11802,PFAM:PF00450,PRINTS:PR00724,PROSITE:PS00131,PROSITE:PS00560,SwissProt:O82229,SwissProt:P52711,SwissProt:Q0WRX3,TAIR:AT2G24010.1,TAIR:AT3G63470.1,TAIR:AT4G30610.1,TrEMBL:A5BH43,TrEMBL:F6HQE1,TrEMBL:I1LXY0;Derives_from=GSCOCT00034994001;Name=Cc10_g03960;Ontology_term=CC_evidence_code:ISS,GO:0004185,GO:0006508,CC_EC_number:3.4.16.6,PRODUCT:Serine carboxypeptidase-like 40,CC_functional_completeness:complete,CC_gene:SCPL40,CC_gene:CXP%3B2-3,CC_gene:SCPL23;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034994001~ Serine carboxypeptidase-like 40~ SCPL40~ complete;original_location=complement(join(6011458..6011839%2C6011261..6011368%2C6010879..6011153%2C6010343..6010646%2C6010166..6010277%2C6009989..6010048%2C6009617..6009722%2C6009063..6009206));owner=coffea | |
| 36478 chr10 manual_curation exon 3051996 3052139 . + . Parent=GSCOCT00034994001 | |
| 36479 chr10 manual_curation exon 3051480 3051585 . + . Parent=GSCOCT00034994001 | |
| 36480 chr10 manual_curation exon 3051154 3051213 . + . Parent=GSCOCT00034994001 | |
| 36481 chr10 manual_curation exon 3050925 3051036 . + . Parent=GSCOCT00034994001 | |
| 36482 chr10 manual_curation exon 3050556 3050859 . + . Parent=GSCOCT00034994001 | |
| 36483 chr10 manual_curation exon 3050049 3050323 . + . Parent=GSCOCT00034994001 | |
| 36484 chr10 manual_curation exon 3049834 3049941 . + . Parent=GSCOCT00034994001 | |
| 36485 chr10 manual_curation exon 3049363 3049744 . + . Parent=GSCOCT00034994001 | |
| 36486 chr10 manual_curation CDS 3051996 3052139 . + 0 Parent=GSCOCT00034994001 | |
| 36487 chr10 manual_curation CDS 3051480 3051585 . + 2 Parent=GSCOCT00034994001 | |
| 36488 chr10 manual_curation CDS 3051154 3051213 . + 2 Parent=GSCOCT00034994001 | |
| 36489 chr10 manual_curation CDS 3050925 3051036 . + 1 Parent=GSCOCT00034994001 | |
| 36490 chr10 manual_curation CDS 3050556 3050859 . + 0 Parent=GSCOCT00034994001 | |
| 36491 chr10 manual_curation CDS 3050049 3050323 . + 1 Parent=GSCOCT00034994001 | |
| 36492 chr10 manual_curation CDS 3049834 3049941 . + 1 Parent=GSCOCT00034994001 | |
| 36493 chr10 manual_curation CDS 3049363 3049744 . + 0 Parent=GSCOCT00034994001 | |
| 36494 chr10 manual_curation gene 3055827 3058129 . + . ID=GSCOCG00034993001;Name=Cc10_g03970 | |
| 36495 chr10 manual_curation mRNA 3055827 3058129 . + . ID=GSCOCT00034993001;Parent=GSCOCG00034993001;Name=Cc10_g03970 | |
| 36496 chr10 manual_curation polypeptide 3055827 3058129 . + . ID=GSCOCP00034993001;Dbxref=InterPro:IPR001563,PANTHER:PTHR11802,PFAM:PF00450,PRINTS:PR00724,SwissProt:P52711,SwissProt:Q0WRX3,SwissProt:Q9SFB5,TAIR:AT2G35780.1,TAIR:AT3G07990.1,TAIR:AT3G63470.1,TrEMBL:A5BH43,TrEMBL:F6H1D7,TrEMBL:F6HQE1;Derives_from=GSCOCT00034993001;Name=Cc10_g03970;Ontology_term=CC_evidence_code:ISS,GO:0004185,GO:0006508,CC_EC_number:3.4.16.6,PRODUCT:Putative Serine carboxypeptidase-like 40,CC_functional_completeness:complete,CC_gene:SCPL40,CC_gene:CXP%3B2-3,CC_gene:SCPL27;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034993001~ Putative Serine carboxypeptidase-like 40~ SCPL40~ complete;original_location=complement(join(6005003..6005375%2C6004746..6004853%2C6004365..6004642%2C6004025..6004264%2C6003803..6003921%2C6003588..6003663%2C6003312..6003437%2C6003073..6003216));owner=coffea | |
| 36497 chr10 manual_curation exon 3057986 3058129 . + . Parent=GSCOCT00034993001 | |
| 36498 chr10 manual_curation exon 3057765 3057890 . + . Parent=GSCOCT00034993001 | |
| 36499 chr10 manual_curation exon 3057539 3057614 . + . Parent=GSCOCT00034993001 | |
| 36500 chr10 manual_curation exon 3057281 3057399 . + . Parent=GSCOCT00034993001 | |
| 36501 chr10 manual_curation exon 3056938 3057177 . + . Parent=GSCOCT00034993001 | |
| 36502 chr10 manual_curation exon 3056560 3056837 . + . Parent=GSCOCT00034993001 | |
| 36503 chr10 manual_curation exon 3056349 3056456 . + . Parent=GSCOCT00034993001 | |
| 36504 chr10 manual_curation exon 3055827 3056199 . + . Parent=GSCOCT00034993001 | |
| 36505 chr10 manual_curation CDS 3057986 3058129 . + 0 Parent=GSCOCT00034993001 | |
| 36506 chr10 manual_curation CDS 3057765 3057890 . + 0 Parent=GSCOCT00034993001 | |
| 36507 chr10 manual_curation CDS 3057539 3057614 . + 2 Parent=GSCOCT00034993001 | |
| 36508 chr10 manual_curation CDS 3057281 3057399 . + 0 Parent=GSCOCT00034993001 | |
| 36509 chr10 manual_curation CDS 3056938 3057177 . + 0 Parent=GSCOCT00034993001 | |
| 36510 chr10 manual_curation CDS 3056560 3056837 . + 1 Parent=GSCOCT00034993001 | |
| 36511 chr10 manual_curation CDS 3056349 3056456 . + 1 Parent=GSCOCT00034993001 | |
| 36512 chr10 manual_curation CDS 3055827 3056199 . + 0 Parent=GSCOCT00034993001 | |
| 36513 chr10 manual_curation gene 3059702 3061970 . + . ID=GSCOCG00034992001;Name=Cc10_g03980 | |
| 36514 chr10 manual_curation mRNA 3059702 3061970 . + . ID=GSCOCT00034992001;Parent=GSCOCG00034992001;Name=Cc10_g03980 | |
| 36515 chr10 manual_curation polypeptide 3059702 3061970 . + . ID=GSCOCP00034992001;Dbxref=InterPro:IPR001563,PANTHER:PTHR11802,PFAM:PF00450,SwissProt:P52711,SwissProt:Q9SFB5,SwissProt:Q9ZUG3,TAIR:AT2G05850.1,TAIR:AT3G07990.1,TAIR:AT3G52020.1,TrEMBL:F6H1D7,TrEMBL:G7IER0,TrEMBL:G7J644;Derives_from=GSCOCT00034992001;Name=Cc10_g03980;Ontology_term=CC_evidence_code:ISS,GO:0004185,GO:0006508,CC_EC_number:3.4.16.6,PRODUCT:Putative Peptidase S10%2C serine carboxypeptidase,CC_functional_completeness:complete,CC_gene:CXP%3B2-3,CC_gene:SCPL27,CC_gene:SCPL38;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034992001~ Putative Peptidase S10%2C serine carboxypeptidase~ CXP%3B2-3~ complete;original_location=complement(join(6001423..6001500%2C6001329..6001353%2C6000867..6000922%2C6000542..6000782%2C6000240..6000481%2C5999232..5999453));owner=coffea | |
| 36516 chr10 manual_curation exon 3061749 3061970 . + . Parent=GSCOCT00034992001 | |
| 36517 chr10 manual_curation exon 3060721 3060962 . + . Parent=GSCOCT00034992001 | |
| 36518 chr10 manual_curation exon 3060420 3060660 . + . Parent=GSCOCT00034992001 | |
| 36519 chr10 manual_curation exon 3060280 3060335 . + . Parent=GSCOCT00034992001 | |
| 36520 chr10 manual_curation exon 3059849 3059873 . + . Parent=GSCOCT00034992001 | |
| 36521 chr10 manual_curation exon 3059702 3059779 . + . Parent=GSCOCT00034992001 | |
| 36522 chr10 manual_curation CDS 3061749 3061970 . + 0 Parent=GSCOCT00034992001 | |
| 36523 chr10 manual_curation CDS 3060721 3060962 . + 1 Parent=GSCOCT00034992001 | |
| 36524 chr10 manual_curation CDS 3060420 3060660 . + 0 Parent=GSCOCT00034992001 | |
| 36525 chr10 manual_curation CDS 3060280 3060335 . + 1 Parent=GSCOCT00034992001 | |
| 36526 chr10 manual_curation CDS 3059849 3059873 . + 0 Parent=GSCOCT00034992001 | |
| 36527 chr10 manual_curation CDS 3059702 3059779 . + 0 Parent=GSCOCT00034992001 | |
| 36528 chr10 manual_curation gene 3062144 3067855 . - . ID=GSCOCG00034991001;Name=Cc10_g03990 | |
| 36529 chr10 manual_curation mRNA 3062144 3067855 . - . ID=GSCOCT00034991001;Parent=GSCOCG00034991001;Name=Cc10_g03990 | |
| 36530 chr10 manual_curation polypeptide 3062763 3067806 . - . ID=GSCOCP00034991001;Dbxref=InterPro:IPR003754,PFAM:PF02602,SUPERFAMILY:SSF69618,SwissProt:O48721,SwissProt:Q10QR9,TAIR:AT2G26540.1,TrEMBL:B9MVK7,TrEMBL:E0CPB0,TrEMBL:G7J5U1;Derives_from=GSCOCT00034991001;Name=Cc10_g03990;Ontology_term=CC_evidence_code:ISS,GO:0004852,GO:0033014,CC_EC_number:missing_EC_number,PRODUCT:Uroporphyrinogen-III synthase%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:UROS;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034991001~ Uroporphyrinogen-III synthase%2C chloroplastic~ UROS~ fragment;original_location=join(5993396..5993608%2C5994112..5994199%2C5994592..5994658%2C5995539..5995657%2C5995822..5995917%2C5996801..5996856%2C5997424..5997509%2C5997812..5997946%2C5998382..5998439);owner=coffea | |
| 36531 chr10 manual_curation exon 3062144 3062648 . - . Parent=GSCOCT00034991001 | |
| 36532 chr10 manual_curation exon 3067594 3067855 . - . Parent=GSCOCT00034991001 | |
| 36533 chr10 manual_curation exon 3067003 3067090 . - . Parent=GSCOCT00034991001 | |
| 36534 chr10 manual_curation exon 3066544 3066610 . - . Parent=GSCOCT00034991001 | |
| 36535 chr10 manual_curation exon 3065545 3065663 . - . Parent=GSCOCT00034991001 | |
| 36536 chr10 manual_curation exon 3065285 3065380 . - . Parent=GSCOCT00034991001 | |
| 36537 chr10 manual_curation exon 3064346 3064401 . - . Parent=GSCOCT00034991001 | |
| 36538 chr10 manual_curation exon 3063693 3063778 . - . Parent=GSCOCT00034991001 | |
| 36539 chr10 manual_curation exon 3063256 3063390 . - . Parent=GSCOCT00034991001 | |
| 36540 chr10 manual_curation exon 3062729 3062820 . - . Parent=GSCOCT00034991001 | |
| 36541 chr10 manual_curation CDS 3067594 3067806 . - 0 Parent=GSCOCT00034991001 | |
| 36542 chr10 manual_curation CDS 3067003 3067090 . - 0 Parent=GSCOCT00034991001 | |
| 36543 chr10 manual_curation CDS 3066544 3066610 . - 1 Parent=GSCOCT00034991001 | |
| 36544 chr10 manual_curation CDS 3065545 3065663 . - 2 Parent=GSCOCT00034991001 | |
| 36545 chr10 manual_curation CDS 3065285 3065380 . - 1 Parent=GSCOCT00034991001 | |
| 36546 chr10 manual_curation CDS 3064346 3064401 . - 1 Parent=GSCOCT00034991001 | |
| 36547 chr10 manual_curation CDS 3063693 3063778 . - 0 Parent=GSCOCT00034991001 | |
| 36548 chr10 manual_curation CDS 3063256 3063390 . - 2 Parent=GSCOCT00034991001 | |
| 36549 chr10 manual_curation CDS 3062763 3062820 . - 2 Parent=GSCOCT00034991001 | |
| 36550 chr10 manual_curation gene 3070474 3075033 . - . ID=GSCOCG00034990001;Name=Cc10_g04000 | |
| 36551 chr10 manual_curation mRNA 3070474 3075033 . - . ID=GSCOCT00034990001;Parent=GSCOCG00034990001;Name=Cc10_g04000 | |
| 36552 chr10 manual_curation polypeptide 3070860 3074497 . - . ID=GSCOCP00034990001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR012677,PFAM:PF00076,PROFILE:PS50102,SMART:SM00360,SwissProt:Q9LEB3,SwissProt:Q9SX79,SwissProt:Q9SX80,TAIR:AT1G47490.1,TAIR:AT1G47500.1,TAIR:AT3G19130.1,TrEMBL:F6H1D6,TrEMBL:I1M8J4,TrEMBL:Q93YF1;Derives_from=GSCOCT00034990001;Name=Cc10_g04000;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,CC_EC_number:missing_EC_number,PRODUCT:Polyadenylate-binding protein RBP47C,CC_functional_completeness:complete,CC_gene:RBP47C,CC_gene:RBP47C',CC_gene:RBP47;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034990001~ Polyadenylate-binding protein RBP47C~ RBP47C~ complete;original_location=join(5986705..5986968%2C5988098..5988578%2C5989252..5989316%2C5989388..5989518%2C5989624..5989720%2C5990172..5990342);owner=coffea | |
| 36553 chr10 manual_curation exon 3074234 3075033 . - . Parent=GSCOCT00034990001 | |
| 36554 chr10 manual_curation exon 3072624 3073104 . - . Parent=GSCOCT00034990001 | |
| 36555 chr10 manual_curation exon 3071886 3071950 . - . Parent=GSCOCT00034990001 | |
| 36556 chr10 manual_curation exon 3071684 3071814 . - . Parent=GSCOCT00034990001 | |
| 36557 chr10 manual_curation exon 3071482 3071578 . - . Parent=GSCOCT00034990001 | |
| 36558 chr10 manual_curation exon 3070474 3071030 . - . Parent=GSCOCT00034990001 | |
| 36559 chr10 manual_curation CDS 3074234 3074497 . - 0 Parent=GSCOCT00034990001 | |
| 36560 chr10 manual_curation CDS 3072624 3073104 . - 0 Parent=GSCOCT00034990001 | |
| 36561 chr10 manual_curation CDS 3071886 3071950 . - 1 Parent=GSCOCT00034990001 | |
| 36562 chr10 manual_curation CDS 3071684 3071814 . - 0 Parent=GSCOCT00034990001 | |
| 36563 chr10 manual_curation CDS 3071482 3071578 . - 2 Parent=GSCOCT00034990001 | |
| 36564 chr10 manual_curation CDS 3070860 3071030 . - 0 Parent=GSCOCT00034990001 | |
| 36565 chr10 manual_curation gene 3080383 3081146 . - . ID=GSCOCG00034989001;Name=Cc10_g04010 | |
| 36566 chr10 manual_curation mRNA 3080383 3081146 . - . ID=GSCOCT00034989001;Parent=GSCOCG00034989001;Name=Cc10_g04010 | |
| 36567 chr10 manual_curation polypeptide 3080709 3081026 . - . ID=GSCOCP00034989001;Derives_from=GSCOCT00034989001;Name=Cc10_g04010;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034989001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=5980176..5980493;owner=coffea | |
| 36568 chr10 manual_curation exon 3080383 3081146 . - . Parent=GSCOCT00034989001 | |
| 36569 chr10 manual_curation CDS 3080709 3081026 . - 0 Parent=GSCOCT00034989001 | |
| 36570 chr10 manual_curation gene 3086543 3095718 . + . ID=GSCOCG00034987001;Name=Cc10_g04020 | |
| 36571 chr10 manual_curation mRNA 3086543 3095718 . + . ID=GSCOCT00034987001;Parent=GSCOCG00034987001;Name=Cc10_g04020 | |
| 36572 chr10 manual_curation polypeptide 3087889 3095355 . + . ID=GSCOCP00034987001;Dbxref=InterPro:IPR004843,PFAM:PF00149,TAIR:AT4G11800.1,TAIR:AT4G23000.1,TrEMBL:F6H1D4,TrEMBL:I1M8J6,TrEMBL:I1MXR3;Derives_from=GSCOCT00034987001;Name=Cc10_g04020;Ontology_term=CC_evidence_code:ISS,GO:0016787,CC_EC_number:missing_EC_number,PRODUCT:Calcineurin-like metallo-phosphoesterase superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034987001~ Calcineurin-like metallo-phosphoesterase superfamily protein~ unknown_gene~ complete;original_location=complement(join(5973015..5973313%2C5972683..5972908%2C5972363..5972608%2C5972139..5972257%2C5971663..5971761%2C5971179..5971266%2C5970160..5970389%2C5969231..5969415%2C5968848..5969047%2C5967940..5968272%2C5967757..5967858%2C5967116..5967413%2C5966786..5966934%2C5966385..5966669%2C5965847..5966020));owner=coffea | |
| 36573 chr10 manual_curation exon 3095182 3095718 . + . Parent=GSCOCT00034987001 | |
| 36574 chr10 manual_curation exon 3094533 3094817 . + . Parent=GSCOCT00034987001 | |
| 36575 chr10 manual_curation exon 3094268 3094416 . + . Parent=GSCOCT00034987001 | |
| 36576 chr10 manual_curation exon 3093789 3094086 . + . Parent=GSCOCT00034987001 | |
| 36577 chr10 manual_curation exon 3093344 3093445 . + . Parent=GSCOCT00034987001 | |
| 36578 chr10 manual_curation exon 3092930 3093262 . + . Parent=GSCOCT00034987001 | |
| 36579 chr10 manual_curation exon 3092155 3092354 . + . Parent=GSCOCT00034987001 | |
| 36580 chr10 manual_curation exon 3091787 3091971 . + . Parent=GSCOCT00034987001 | |
| 36581 chr10 manual_curation exon 3090813 3091042 . + . Parent=GSCOCT00034987001 | |
| 36582 chr10 manual_curation exon 3089936 3090023 . + . Parent=GSCOCT00034987001 | |
| 36583 chr10 manual_curation exon 3089441 3089539 . + . Parent=GSCOCT00034987001 | |
| 36584 chr10 manual_curation exon 3088945 3089063 . + . Parent=GSCOCT00034987001 | |
| 36585 chr10 manual_curation exon 3088594 3088839 . + . Parent=GSCOCT00034987001 | |
| 36586 chr10 manual_curation exon 3088294 3088519 . + . Parent=GSCOCT00034987001 | |
| 36587 chr10 manual_curation exon 3086543 3088187 . + . Parent=GSCOCT00034987001 | |
| 36588 chr10 manual_curation CDS 3095182 3095355 . + 0 Parent=GSCOCT00034987001 | |
| 36589 chr10 manual_curation CDS 3094533 3094817 . + 0 Parent=GSCOCT00034987001 | |
| 36590 chr10 manual_curation CDS 3094268 3094416 . + 1 Parent=GSCOCT00034987001 | |
| 36591 chr10 manual_curation CDS 3093789 3094086 . + 0 Parent=GSCOCT00034987001 | |
| 36592 chr10 manual_curation CDS 3093344 3093445 . + 0 Parent=GSCOCT00034987001 | |
| 36593 chr10 manual_curation CDS 3092930 3093262 . + 0 Parent=GSCOCT00034987001 | |
| 36594 chr10 manual_curation CDS 3092155 3092354 . + 1 Parent=GSCOCT00034987001 | |
| 36595 chr10 manual_curation CDS 3091787 3091971 . + 2 Parent=GSCOCT00034987001 | |
| 36596 chr10 manual_curation CDS 3090813 3091042 . + 0 Parent=GSCOCT00034987001 | |
| 36597 chr10 manual_curation CDS 3089936 3090023 . + 2 Parent=GSCOCT00034987001 | |
| 36598 chr10 manual_curation CDS 3089441 3089539 . + 2 Parent=GSCOCT00034987001 | |
| 36599 chr10 manual_curation CDS 3088945 3089063 . + 0 Parent=GSCOCT00034987001 | |
| 36600 chr10 manual_curation CDS 3088594 3088839 . + 0 Parent=GSCOCT00034987001 | |
| 36601 chr10 manual_curation CDS 3088294 3088519 . + 2 Parent=GSCOCT00034987001 | |
| 36602 chr10 manual_curation CDS 3087889 3088187 . + 0 Parent=GSCOCT00034987001 | |
| 36603 chr10 manual_curation gene 3100161 3101327 . + . ID=GSCOCG00034986001;Name=Cc10_g04030 | |
| 36604 chr10 manual_curation mRNA 3100161 3101327 . + . ID=GSCOCT00034986001;Parent=GSCOCG00034986001;Name=Cc10_g04030 | |
| 36605 chr10 manual_curation polypeptide 3100161 3101327 . + . ID=GSCOCP00034986001;Dbxref=InterPro:IPR007087,InterPro:IPR015880,PROFILE:PS50157,PROSITE:PS00028,SMART:SM00355,SwissProt:O65499,SwissProt:Q9M202,SwissProt:Q9SIJ0,TAIR:AT2G17180.1,TAIR:AT3G60580.1,TAIR:AT4G35280.1,TrEMBL:A5C074,TrEMBL:B9HPY6,TrEMBL:B9MYZ1;Derives_from=GSCOCT00034986001;Name=Cc10_g04030;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Zinc finger protein ZAT3,CC_functional_completeness:complete,CC_gene:ZAT3,CC_gene:ZAT2,CC_gene:ZAT9;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034986001~ Zinc finger protein ZAT3~ ZAT3~ complete;original_location=complement(join(5960495..5961041%2C5959875..5960416));owner=coffea | |
| 36606 chr10 manual_curation exon 3100786 3101327 . + . Parent=GSCOCT00034986001 | |
| 36607 chr10 manual_curation exon 3100161 3100707 . + . Parent=GSCOCT00034986001 | |
| 36608 chr10 manual_curation CDS 3100786 3101327 . + 1 Parent=GSCOCT00034986001 | |
| 36609 chr10 manual_curation CDS 3100161 3100707 . + 0 Parent=GSCOCT00034986001 | |
| 36610 chr10 manual_curation gene 3102771 3104672 . - . ID=GSCOCG00034985001;Name=Cc10_g04040 | |
| 36611 chr10 manual_curation mRNA 3102771 3104672 . - . ID=GSCOCT00034985001;Parent=GSCOCG00034985001;Name=Cc10_g04040 | |
| 36612 chr10 manual_curation polypeptide 3102771 3104672 . - . ID=GSCOCP00034985001;Dbxref=TAIR:AT2G15730.1,TAIR:AT3G50620.1,TAIR:AT4G34420.1,TrEMBL:A5C9Q7,TrEMBL:B9HRX9,TrEMBL:B9N4W4;Derives_from=GSCOCT00034985001;Name=Cc10_g04040;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:P-loop containing nucleoside triphosphate hydrolases superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034985001~ P-loop containing nucleoside triphosphate hydrolases superfamily protein~ unknown_gene~ complete;original_location=join(5956530..5956717%2C5956792..5957050%2C5957744..5957923%2C5958029..5958184%2C5958264..5958431);owner=coffea | |
| 36613 chr10 manual_curation exon 3104485 3104672 . - . Parent=GSCOCT00034985001 | |
| 36614 chr10 manual_curation exon 3104152 3104410 . - . Parent=GSCOCT00034985001 | |
| 36615 chr10 manual_curation exon 3103279 3103458 . - . Parent=GSCOCT00034985001 | |
| 36616 chr10 manual_curation exon 3103018 3103173 . - . Parent=GSCOCT00034985001 | |
| 36617 chr10 manual_curation exon 3102771 3102938 . - . Parent=GSCOCT00034985001 | |
| 36618 chr10 manual_curation CDS 3104485 3104672 . - 0 Parent=GSCOCT00034985001 | |
| 36619 chr10 manual_curation CDS 3104152 3104410 . - 2 Parent=GSCOCT00034985001 | |
| 36620 chr10 manual_curation CDS 3103279 3103458 . - 0 Parent=GSCOCT00034985001 | |
| 36621 chr10 manual_curation CDS 3103018 3103173 . - 0 Parent=GSCOCT00034985001 | |
| 36622 chr10 manual_curation CDS 3102771 3102938 . - 0 Parent=GSCOCT00034985001 | |
| 36623 chr10 manual_curation gene 3113303 3116564 . + . ID=GSCOCG00034984001;Name=Cc10_g04050 | |
| 36624 chr10 manual_curation mRNA 3113303 3116564 . + . ID=GSCOCT00034984001;Parent=GSCOCG00034984001;Name=Cc10_g04050 | |
| 36625 chr10 manual_curation polypeptide 3113303 3116564 . + . ID=GSCOCP00034984001;Dbxref=InterPro:IPR003042,InterPro:IPR013698,PFAM:PF08491,PRINTS:PR00420,SwissProt:O48651,SwissProt:O65404,SwissProt:O65726,TAIR:AT1G58440.1,TAIR:AT2G22830.1,TAIR:AT4G37760.1,TrEMBL:B8A3C6,TrEMBL:D7UE80,TrEMBL:I1KL88;Derives_from=GSCOCT00034984001;Name=Cc10_g04050;Ontology_term=CC_evidence_code:ISS,GO:0004506,GO:0008152,GO:0016021,GO:0016491,GO:0050660,GO:0055114,CC_EC_number:1.14.99.7,CC_EC_number:1.14.99.7,PRODUCT:Squalene monooxygenase,CC_functional_completeness:complete,CC_gene:SQP1%2C1,CC_gene:SQP1%2C2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034984001~ Squalene monooxygenase~ SQP1%2C1~ complete;original_location=complement(join(5947597..5947899%2C5946545..5946656%2C5946219..5946393%2C5945868..5946036%2C5945249..5945746%2C5944826..5945104%2C5944638..5944724));owner=coffea | |
| 36626 chr10 manual_curation exon 3116478 3116564 . + . Parent=GSCOCT00034984001 | |
| 36627 chr10 manual_curation exon 3116098 3116376 . + . Parent=GSCOCT00034984001 | |
| 36628 chr10 manual_curation exon 3115456 3115953 . + . Parent=GSCOCT00034984001 | |
| 36629 chr10 manual_curation exon 3115166 3115334 . + . Parent=GSCOCT00034984001 | |
| 36630 chr10 manual_curation exon 3114809 3114983 . + . Parent=GSCOCT00034984001 | |
| 36631 chr10 manual_curation exon 3114546 3114657 . + . Parent=GSCOCT00034984001 | |
| 36632 chr10 manual_curation exon 3113303 3113605 . + . Parent=GSCOCT00034984001 | |
| 36633 chr10 manual_curation CDS 3116478 3116564 . + 0 Parent=GSCOCT00034984001 | |
| 36634 chr10 manual_curation CDS 3116098 3116376 . + 0 Parent=GSCOCT00034984001 | |
| 36635 chr10 manual_curation CDS 3115456 3115953 . + 0 Parent=GSCOCT00034984001 | |
| 36636 chr10 manual_curation CDS 3115166 3115334 . + 2 Parent=GSCOCT00034984001 | |
| 36637 chr10 manual_curation CDS 3114809 3114983 . + 1 Parent=GSCOCT00034984001 | |
| 36638 chr10 manual_curation CDS 3114546 3114657 . + 0 Parent=GSCOCT00034984001 | |
| 36639 chr10 manual_curation CDS 3113303 3113605 . + 0 Parent=GSCOCT00034984001 | |
| 36640 chr10 manual_curation gene 3117518 3122929 . + . ID=GSCOCG00034983001;Name=Cc10_g04060 | |
| 36641 chr10 manual_curation mRNA 3117518 3122929 . + . ID=GSCOCT00034983001;Parent=GSCOCG00034983001;Name=Cc10_g04060 | |
| 36642 chr10 manual_curation polypeptide 3117727 3122929 . + . ID=GSCOCP00034983001;Dbxref=InterPro:IPR019163,PFAM:PF09766,SwissProt:A4IFQ0,SwissProt:Q13769,SwissProt:Q6NY52,TAIR:AT1G45233.2,TAIR:AT5G42920.2,TrEMBL:B9R7B4,TrEMBL:F6H1D0,TrEMBL:I1K802;Derives_from=GSCOCT00034983001;Name=Cc10_g04060;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:THO complex%2C subunit 5,CC_functional_completeness:complete,CC_gene:thoc5,CC_gene:THOC5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034983001~ THO complex%2C subunit 5~ thoc5~ complete;original_location=complement(join(5943263..5943475%2C5942369..5942659%2C5941365..5941701%2C5940439..5940776%2C5940090..5940349%2C5939089..5939689%2C5938867..5939001%2C5938273..5938539));owner=coffea | |
| 36643 chr10 manual_curation exon 3122663 3122929 . + . Parent=GSCOCT00034983001 | |
| 36644 chr10 manual_curation exon 3122201 3122335 . + . Parent=GSCOCT00034983001 | |
| 36645 chr10 manual_curation exon 3121513 3122113 . + . Parent=GSCOCT00034983001 | |
| 36646 chr10 manual_curation exon 3120853 3121112 . + . Parent=GSCOCT00034983001 | |
| 36647 chr10 manual_curation exon 3120426 3120763 . + . Parent=GSCOCT00034983001 | |
| 36648 chr10 manual_curation exon 3119501 3119837 . + . Parent=GSCOCT00034983001 | |
| 36649 chr10 manual_curation exon 3118543 3118833 . + . Parent=GSCOCT00034983001 | |
| 36650 chr10 manual_curation exon 3117518 3117939 . + . Parent=GSCOCT00034983001 | |
| 36651 chr10 manual_curation CDS 3122663 3122929 . + 0 Parent=GSCOCT00034983001 | |
| 36652 chr10 manual_curation CDS 3122201 3122335 . + 0 Parent=GSCOCT00034983001 | |
| 36653 chr10 manual_curation CDS 3121513 3122113 . + 2 Parent=GSCOCT00034983001 | |
| 36654 chr10 manual_curation CDS 3120853 3121112 . + 0 Parent=GSCOCT00034983001 | |
| 36655 chr10 manual_curation CDS 3120426 3120763 . + 1 Parent=GSCOCT00034983001 | |
| 36656 chr10 manual_curation CDS 3119501 3119837 . + 0 Parent=GSCOCT00034983001 | |
| 36657 chr10 manual_curation CDS 3118543 3118833 . + 0 Parent=GSCOCT00034983001 | |
| 36658 chr10 manual_curation CDS 3117727 3117939 . + 0 Parent=GSCOCT00034983001 | |
| 36659 chr10 manual_curation gene 3123094 3128091 . - . ID=GSCOCG00034982001;Name=Cc10_g04070 | |
| 36660 chr10 manual_curation mRNA 3123094 3128091 . - . ID=GSCOCT00034982001;Parent=GSCOCG00034982001;Name=Cc10_g04070 | |
| 36661 chr10 manual_curation polypeptide 3124144 3127096 . - . ID=GSCOCP00034982001;Dbxref=InterPro:IPR004827,InterPro:IPR011616,PFAM:PF00170,PROFILE:PS50217,PROSITE:PS00036,SMART:SM00338,SwissProt:Q9M7Q2,SwissProt:Q9M7Q4,SwissProt:Q9M7Q5,TAIR:AT1G45249.3,TAIR:AT3G19290.3,TAIR:AT4G34000.1,TrEMBL:E1APJ5,TrEMBL:H6V8U1,TrEMBL:Q6QPK1;Derives_from=GSCOCT00034982001;Name=Cc10_g04070;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0043565,GO:0046983,CC_EC_number:missing_EC_number,PRODUCT:Putative ABSCISIC ACID-INSENSITIVE 5-like protein 5,CC_functional_completeness:complete,CC_gene:ABF2,CC_gene:ABF1,CC_gene:ABF4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034982001~ Putative ABSCISIC ACID-INSENSITIVE 5-like protein 5~ ABF2~ complete;original_location=join(5934106..5934163%2C5934284..5935077%2C5935957..5936028%2C5936126..5936155%2C5936984..5937058);owner=coffea | |
| 36662 chr10 manual_curation exon 3127039 3128091 . - . Parent=GSCOCT00034982001 | |
| 36663 chr10 manual_curation exon 3126125 3126918 . - . Parent=GSCOCT00034982001 | |
| 36664 chr10 manual_curation exon 3125174 3125245 . - . Parent=GSCOCT00034982001 | |
| 36665 chr10 manual_curation exon 3125047 3125076 . - . Parent=GSCOCT00034982001 | |
| 36666 chr10 manual_curation exon 3123094 3124218 . - . Parent=GSCOCT00034982001 | |
| 36667 chr10 manual_curation CDS 3127039 3127096 . - 0 Parent=GSCOCT00034982001 | |
| 36668 chr10 manual_curation CDS 3126125 3126918 . - 1 Parent=GSCOCT00034982001 | |
| 36669 chr10 manual_curation CDS 3125174 3125245 . - 0 Parent=GSCOCT00034982001 | |
| 36670 chr10 manual_curation CDS 3125047 3125076 . - 0 Parent=GSCOCT00034982001 | |
| 36671 chr10 manual_curation CDS 3124144 3124218 . - 0 Parent=GSCOCT00034982001 | |
| 36672 chr10 manual_curation gene 3135872 3140008 . - . ID=GSCOCG00034980001;Name=Cc10_g04080 | |
| 36673 chr10 manual_curation mRNA 3135872 3140008 . - . ID=GSCOCT00034980001;Parent=GSCOCG00034980001;Name=Cc10_g04080 | |
| 36674 chr10 manual_curation polypeptide 3137044 3139770 . - . ID=GSCOCP00034980001;Dbxref=InterPro:IPR021602,PFAM:PF11523,SwissProt:Q42463,SwissProt:Q5D869,TAIR:AT1G45230.1,TAIR:AT2G40030.1,TAIR:AT3G46630.1,TrEMBL:A5BA53,TrEMBL:B9R7B7,TrEMBL:Q8RVV8;Derives_from=GSCOCT00034980001;Name=Cc10_g04080;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein DCL%2C chloroplastic,CC_functional_completeness:complete,CC_gene:DCL,CC_gene:NRPE1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034980001~ Protein DCL%2C chloroplastic~ DCL~ complete;original_location=join(5921432..5921814%2C5922874..5922988%2C5923982..5924158);owner=coffea | |
| 36675 chr10 manual_curation exon 3139388 3140008 . - . Parent=GSCOCT00034980001 | |
| 36676 chr10 manual_curation exon 3138214 3138328 . - . Parent=GSCOCT00034980001 | |
| 36677 chr10 manual_curation exon 3135872 3137220 . - . Parent=GSCOCT00034980001 | |
| 36678 chr10 manual_curation CDS 3139388 3139770 . - 0 Parent=GSCOCT00034980001 | |
| 36679 chr10 manual_curation CDS 3138214 3138328 . - 2 Parent=GSCOCT00034980001 | |
| 36680 chr10 manual_curation CDS 3137044 3137220 . - 0 Parent=GSCOCT00034980001 | |
| 36681 chr10 manual_curation gene 3142266 3159913 . + . ID=GSCOCG00034979001;Name=Cc10_g04090 | |
| 36682 chr10 manual_curation mRNA 3142266 3159913 . + . ID=GSCOCT00034979001;Parent=GSCOCG00034979001;Name=Cc10_g04090 | |
| 36683 chr10 manual_curation polypeptide 3142266 3159913 . + . ID=GSCOCP00034979001;Dbxref=InterPro:IPR001320,InterPro:IPR001638,InterPro:IPR001828,InterPro:IPR015683,PANTHER:PTHR18966,PFAM:PF00060,PFAM:PF00497,PFAM:PF01094,SMART:SM00079,SwissProt:O04660,SwissProt:O81078,SwissProt:Q8LGN0,TAIR:AT2G29100.1,TAIR:AT2G29120.1,TAIR:AT5G27100.1,TrEMBL:B9MVR1,TrEMBL:B9MVR4,TrEMBL:G5EKN1;Derives_from=GSCOCT00034979001;Name=Cc10_g04090;Ontology_term=CC_evidence_code:ISS,GO:0004970,GO:0005215,GO:0005234,GO:0006810,GO:0016020,GO:0030288,CC_EC_number:missing_EC_number,PRODUCT:Putative Glutamate receptor 2.7,CC_functional_completeness:complete,CC_gene:GLR2.7,CC_gene:GLR2.9,CC_gene:GLR2.1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034979001~ Putative Glutamate receptor 2.7~ GLR2.7~ complete;original_location=complement(join(5918651..5918936%2C5916542..5917860%2C5916064..5916379%2C5915466..5915863%2C5914562..5915018%2C5903062..5903579%2C5902311..5902626%2C5901803..5902200%2C5901289..5901681));owner=coffea | |
| 36684 chr10 manual_curation exon 3159521 3159913 . + . Parent=GSCOCT00034979001 | |
| 36685 chr10 manual_curation exon 3159002 3159399 . + . Parent=GSCOCT00034979001 | |
| 36686 chr10 manual_curation exon 3158576 3158891 . + . Parent=GSCOCT00034979001 | |
| 36687 chr10 manual_curation exon 3157623 3158140 . + . Parent=GSCOCT00034979001 | |
| 36688 chr10 manual_curation exon 3146184 3146640 . + . Parent=GSCOCT00034979001 | |
| 36689 chr10 manual_curation exon 3145339 3145736 . + . Parent=GSCOCT00034979001 | |
| 36690 chr10 manual_curation exon 3144823 3145138 . + . Parent=GSCOCT00034979001 | |
| 36691 chr10 manual_curation exon 3143342 3144660 . + . Parent=GSCOCT00034979001 | |
| 36692 chr10 manual_curation exon 3142266 3142551 . + . Parent=GSCOCT00034979001 | |
| 36693 chr10 manual_curation CDS 3159521 3159913 . + 0 Parent=GSCOCT00034979001 | |
| 36694 chr10 manual_curation CDS 3159002 3159399 . + 1 Parent=GSCOCT00034979001 | |
| 36695 chr10 manual_curation CDS 3158576 3158891 . + 0 Parent=GSCOCT00034979001 | |
| 36696 chr10 manual_curation CDS 3157623 3158140 . + 1 Parent=GSCOCT00034979001 | |
| 36697 chr10 manual_curation CDS 3146184 3146640 . + 0 Parent=GSCOCT00034979001 | |
| 36698 chr10 manual_curation CDS 3145339 3145736 . + 1 Parent=GSCOCT00034979001 | |
| 36699 chr10 manual_curation CDS 3144823 3145138 . + 0 Parent=GSCOCT00034979001 | |
| 36700 chr10 manual_curation CDS 3143342 3144660 . + 1 Parent=GSCOCT00034979001 | |
| 36701 chr10 manual_curation CDS 3142266 3142551 . + 0 Parent=GSCOCT00034979001 | |
| 36702 chr10 manual_curation gene 3165069 3171958 . + . ID=GSCOCG00034977001;Name=Cc10_g04100 | |
| 36703 chr10 manual_curation mRNA 3165069 3171958 . + . ID=GSCOCT00034977001;Parent=GSCOCG00034977001;Name=Cc10_g04100 | |
| 36704 chr10 manual_curation polypeptide 3165106 3171665 . + . ID=GSCOCP00034977001;Dbxref=InterPro:IPR000719,InterPro:IPR000961,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR017892,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00433,PROFILE:PS50011,PROFILE:PS51285,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00133,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q2LZZ7,SwissProt:Q9NBK5,SwissProt:Q9Y2H1,TAIR:AT3G23310.1,TAIR:AT4G14350.1,TAIR:AT5G09890.2,TrEMBL:B9GNV8,TrEMBL:B9R7B8,TrEMBL:E0CPV2;Derives_from=GSCOCT00034977001;Name=Cc10_g04100;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.11,PRODUCT:Serine/threonine-protein kinase tricorner,CC_functional_completeness:complete,CC_gene:trc,CC_gene:STK38L;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034977001~ Serine/threonine-protein kinase tricorner~ trc~ complete;original_location=complement(join(5895897..5896096%2C5895583..5895757%2C5894446..5894529%2C5893819..5894060%2C5893051..5893282%2C5892742..5892906%2C5892309..5892440%2C5891986..5892099%2C5891438..5891485%2C5891165..5891243%2C5890479..5890535%2C5889537..5889589));owner=coffea | |
| 36705 chr10 manual_curation exon 3171613 3171958 . + . Parent=GSCOCT00034977001 | |
| 36706 chr10 manual_curation exon 3170667 3170723 . + . Parent=GSCOCT00034977001 | |
| 36707 chr10 manual_curation exon 3169959 3170037 . + . Parent=GSCOCT00034977001 | |
| 36708 chr10 manual_curation exon 3169717 3169764 . + . Parent=GSCOCT00034977001 | |
| 36709 chr10 manual_curation exon 3169103 3169216 . + . Parent=GSCOCT00034977001 | |
| 36710 chr10 manual_curation exon 3168762 3168893 . + . Parent=GSCOCT00034977001 | |
| 36711 chr10 manual_curation exon 3168296 3168460 . + . Parent=GSCOCT00034977001 | |
| 36712 chr10 manual_curation exon 3167920 3168151 . + . Parent=GSCOCT00034977001 | |
| 36713 chr10 manual_curation exon 3167142 3167383 . + . Parent=GSCOCT00034977001 | |
| 36714 chr10 manual_curation exon 3166673 3166756 . + . Parent=GSCOCT00034977001 | |
| 36715 chr10 manual_curation exon 3165445 3165619 . + . Parent=GSCOCT00034977001 | |
| 36716 chr10 manual_curation exon 3165069 3165305 . + . Parent=GSCOCT00034977001 | |
| 36717 chr10 manual_curation CDS 3171613 3171665 . + 1 Parent=GSCOCT00034977001 | |
| 36718 chr10 manual_curation CDS 3170667 3170723 . + 1 Parent=GSCOCT00034977001 | |
| 36719 chr10 manual_curation CDS 3169959 3170037 . + 0 Parent=GSCOCT00034977001 | |
| 36720 chr10 manual_curation CDS 3169717 3169764 . + 0 Parent=GSCOCT00034977001 | |
| 36721 chr10 manual_curation CDS 3169103 3169216 . + 0 Parent=GSCOCT00034977001 | |
| 36722 chr10 manual_curation CDS 3168762 3168893 . + 0 Parent=GSCOCT00034977001 | |
| 36723 chr10 manual_curation CDS 3168296 3168460 . + 0 Parent=GSCOCT00034977001 | |
| 36724 chr10 manual_curation CDS 3167920 3168151 . + 2 Parent=GSCOCT00034977001 | |
| 36725 chr10 manual_curation CDS 3167142 3167383 . + 0 Parent=GSCOCT00034977001 | |
| 36726 chr10 manual_curation CDS 3166673 3166756 . + 0 Parent=GSCOCT00034977001 | |
| 36727 chr10 manual_curation CDS 3165445 3165619 . + 2 Parent=GSCOCT00034977001 | |
| 36728 chr10 manual_curation CDS 3165106 3165305 . + 0 Parent=GSCOCT00034977001 | |
| 36729 chr10 manual_curation gene 3176440 3178266 . + . ID=GSCOCG00034975001;Name=Cc10_g04110 | |
| 36730 chr10 manual_curation mRNA 3176440 3178266 . + . ID=GSCOCT00034975001;Parent=GSCOCG00034975001;Name=Cc10_g04110 | |
| 36731 chr10 manual_curation polypeptide 3176440 3178266 . + . ID=GSCOCP00034975001;Dbxref=TAIR:AT5G42900.1,TrEMBL:A5CB41,TrEMBL:B9MVQ9,TrEMBL:E0CPV3;Derives_from=GSCOCT00034975001;Name=Cc10_g04110;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative cold regulated gene 27,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034975001~ Putative cold regulated gene 27~ unknown_gene~ complete;original_location=complement(join(5884673..5884762%2C5883928..5884128%2C5883559..5883799%2C5883091..5883203%2C5882936..5883004));owner=coffea | |
| 36732 chr10 manual_curation exon 3178198 3178266 . + . Parent=GSCOCT00034975001 | |
| 36733 chr10 manual_curation exon 3177999 3178111 . + . Parent=GSCOCT00034975001 | |
| 36734 chr10 manual_curation exon 3177403 3177643 . + . Parent=GSCOCT00034975001 | |
| 36735 chr10 manual_curation exon 3177074 3177274 . + . Parent=GSCOCT00034975001 | |
| 36736 chr10 manual_curation exon 3176440 3176529 . + . Parent=GSCOCT00034975001 | |
| 36737 chr10 manual_curation CDS 3178198 3178266 . + 0 Parent=GSCOCT00034975001 | |
| 36738 chr10 manual_curation CDS 3177999 3178111 . + 1 Parent=GSCOCT00034975001 | |
| 36739 chr10 manual_curation CDS 3177403 3177643 . + 0 Parent=GSCOCT00034975001 | |
| 36740 chr10 manual_curation CDS 3177074 3177274 . + 0 Parent=GSCOCT00034975001 | |
| 36741 chr10 manual_curation CDS 3176440 3176529 . + 0 Parent=GSCOCT00034975001 | |
| 36742 chr10 manual_curation gene 3178349 3179239 . - . ID=GSCOCG00034974001;Name=Cc10_g04120 | |
| 36743 chr10 manual_curation mRNA 3178349 3179239 . - . ID=GSCOCT00034974001;Parent=GSCOCG00034974001;Name=Cc10_g04120 | |
| 36744 chr10 manual_curation polypeptide 3178349 3178573 . - . ID=GSCOCP00034974001;Derives_from=GSCOCT00034974001;Name=Cc10_g04120;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034974001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=5882629..5882853;owner=coffea | |
| 36745 chr10 manual_curation exon 3178349 3179239 . - . Parent=GSCOCT00034974001 | |
| 36746 chr10 manual_curation CDS 3178349 3178573 . - 0 Parent=GSCOCT00034974001 | |
| 36747 chr10 manual_curation gene 3179496 3183457 . + . ID=GSCOCG00034973001;Name=Cc10_g04130 | |
| 36748 chr10 manual_curation mRNA 3179496 3183457 . + . ID=GSCOCT00034973001;Parent=GSCOCG00034973001;Name=Cc10_g04130 | |
| 36749 chr10 manual_curation polypeptide 3179947 3182557 . + . ID=GSCOCP00034973001;Dbxref=InterPro:IPR005031,PFAM:PF03364,SwissProt:Q3THF9,SwissProt:Q6PBN4,SwissProt:Q9H8M1,TAIR:AT4G17650.1,TrEMBL:B9GNW0,TrEMBL:B9R7C0,TrEMBL:E0CPV4;Derives_from=GSCOCT00034973001;Name=Cc10_g04130;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Polyketide cyclase / dehydrase and lipid transport protein,CC_functional_completeness:complete,CC_gene:zgc,CC_gene:Coq10b,CC_gene:COQ10B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034973001~ Polyketide cyclase / dehydrase and lipid transport protein~ zgc:73324~ complete;original_location=complement(join(5880900..5881255%2C5879931..5880126%2C5879122..5879253%2C5878645..5878767));owner=coffea | |
| 36750 chr10 manual_curation exon 3182435 3183457 . + . Parent=GSCOCT00034973001 | |
| 36751 chr10 manual_curation exon 3181949 3182080 . + . Parent=GSCOCT00034973001 | |
| 36752 chr10 manual_curation exon 3181076 3181271 . + . Parent=GSCOCT00034973001 | |
| 36753 chr10 manual_curation exon 3179496 3180302 . + . Parent=GSCOCT00034973001 | |
| 36754 chr10 manual_curation CDS 3182435 3182557 . + 0 Parent=GSCOCT00034973001 | |
| 36755 chr10 manual_curation CDS 3181949 3182080 . + 0 Parent=GSCOCT00034973001 | |
| 36756 chr10 manual_curation CDS 3181076 3181271 . + 2 Parent=GSCOCT00034973001 | |
| 36757 chr10 manual_curation CDS 3179947 3180302 . + 0 Parent=GSCOCT00034973001 | |
| 36758 chr10 manual_curation gene 3200159 3203258 . + . ID=GSCOCG00034972001;Name=Cc10_g04140 | |
| 36759 chr10 manual_curation mRNA 3200159 3203258 . + . ID=GSCOCT00034972001;Parent=GSCOCG00034972001;Name=Cc10_g04140 | |
| 36760 chr10 manual_curation polypeptide 3200425 3202894 . + . ID=GSCOCP00034972001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:A2Z212,SwissProt:Q0J185,SwissProt:Q9LJK2,TAIR:AT2G29090.1,TAIR:AT3G19270.1,TAIR:AT5G45340.1,TrEMBL:B9MVQ8,TrEMBL:F4YF81,TrEMBL:F6H1D3;Derives_from=GSCOCT00034972001;Name=Cc10_g04140;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.79,PRODUCT:Abscisic acid 8'-hydroxylase 4,CC_functional_completeness:complete,CC_gene:CYP707A4,CC_gene:CYP707A7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034972001~ Abscisic acid 8'-hydroxylase 4~ CYP707A4~ complete;original_location=complement(join(5860698..5860777%2C5860266..5860587%2C5859991..5860140%2C5859553..5859801%2C5859315..5859404%2C5859133..5859211%2C5858858..5858964%2C5858584..5858702%2C5858308..5858407));owner=coffea | |
| 36761 chr10 manual_curation exon 3202795 3203258 . + . Parent=GSCOCT00034972001 | |
| 36762 chr10 manual_curation exon 3202500 3202618 . + . Parent=GSCOCT00034972001 | |
| 36763 chr10 manual_curation exon 3202238 3202344 . + . Parent=GSCOCT00034972001 | |
| 36764 chr10 manual_curation exon 3201991 3202069 . + . Parent=GSCOCT00034972001 | |
| 36765 chr10 manual_curation exon 3201798 3201887 . + . Parent=GSCOCT00034972001 | |
| 36766 chr10 manual_curation exon 3201401 3201649 . + . Parent=GSCOCT00034972001 | |
| 36767 chr10 manual_curation exon 3201062 3201211 . + . Parent=GSCOCT00034972001 | |
| 36768 chr10 manual_curation exon 3200615 3200936 . + . Parent=GSCOCT00034972001 | |
| 36769 chr10 manual_curation exon 3200159 3200504 . + . Parent=GSCOCT00034972001 | |
| 36770 chr10 manual_curation CDS 3202795 3202894 . + 2 Parent=GSCOCT00034972001 | |
| 36771 chr10 manual_curation CDS 3202500 3202618 . + 0 Parent=GSCOCT00034972001 | |
| 36772 chr10 manual_curation CDS 3202238 3202344 . + 1 Parent=GSCOCT00034972001 | |
| 36773 chr10 manual_curation CDS 3201991 3202069 . + 0 Parent=GSCOCT00034972001 | |
| 36774 chr10 manual_curation CDS 3201798 3201887 . + 0 Parent=GSCOCT00034972001 | |
| 36775 chr10 manual_curation CDS 3201401 3201649 . + 0 Parent=GSCOCT00034972001 | |
| 36776 chr10 manual_curation CDS 3201062 3201211 . + 0 Parent=GSCOCT00034972001 | |
| 36777 chr10 manual_curation CDS 3200615 3200936 . + 2 Parent=GSCOCT00034972001 | |
| 36778 chr10 manual_curation CDS 3200425 3200504 . + 0 Parent=GSCOCT00034972001 | |
| 36779 chr10 manual_curation gene 3204811 3207776 . - . ID=GSCOCG00034970001;Name=Cc10_g04150 | |
| 36780 chr10 manual_curation mRNA 3204811 3207776 . - . ID=GSCOCT00034970001;Parent=GSCOCG00034970001;Name=Cc10_g04150 | |
| 36781 chr10 manual_curation polypeptide 3205120 3206358 . - . ID=GSCOCP00034970001;Dbxref=GENE3D:G3DSA:3.40.30.10,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR013766,InterPro:IPR017936,PANTHER:PTHR10438,PFAM:PF00085,PROFILE:PS51352,SUPERFAMILY:SSF52833,SwissProt:Q6YTI3,SwissProt:Q9C5C5,TAIR:AT1G07700.3,TrEMBL:B9MVQ7,TrEMBL:E0CPV6,TrEMBL:I0BZV2;Derives_from=GSCOCT00034970001;Name=Cc10_g04150;Ontology_term=CC_evidence_code:ISS,GO:0045454,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:At1g07700,CC_gene:Os02g0567100;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034970001~ Putative uncharacterized protein~ At1g07700~ complete;original_location=join(5854844..5855311%2C5855619..5855672%2C5855939..5856082);owner=coffea | |
| 36782 chr10 manual_curation exon 3207638 3207776 . - . Parent=GSCOCT00034970001 | |
| 36783 chr10 manual_curation exon 3205891 3206531 . - . Parent=GSCOCT00034970001 | |
| 36784 chr10 manual_curation exon 3205530 3205583 . - . Parent=GSCOCT00034970001 | |
| 36785 chr10 manual_curation exon 3204811 3205263 . - . Parent=GSCOCT00034970001 | |
| 36786 chr10 manual_curation CDS 3205891 3206358 . - 0 Parent=GSCOCT00034970001 | |
| 36787 chr10 manual_curation CDS 3205530 3205583 . - 0 Parent=GSCOCT00034970001 | |
| 36788 chr10 manual_curation CDS 3205120 3205263 . - 0 Parent=GSCOCT00034970001 | |
| 36789 chr10 manual_curation gene 3211185 3213051 . + . ID=GSCOCG00034969001;Name=Cc10_g04160 | |
| 36790 chr10 manual_curation mRNA 3211185 3213051 . + . ID=GSCOCT00034969001;Parent=GSCOCG00034969001;Name=Cc10_g04160 | |
| 36791 chr10 manual_curation polypeptide 3211467 3212511 . + . ID=GSCOCP00034969001;Dbxref=InterPro:IPR002198,InterPro:IPR003033,PANTHER:PTHR19410,PFAM:PF02036,SUPERFAMILY:SSF55718,TAIR:AT5G42890.1,TrEMBL:A5AH21,TrEMBL:C6T0J9,TrEMBL:I1MXP1;Derives_from=GSCOCT00034969001;Name=Cc10_g04160;Ontology_term=CC_evidence_code:ISS,GO:0008152,GO:0016491,GO:0032934,CC_EC_number:missing_EC_number,PRODUCT:sterol carrier protein 2,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034969001~ sterol carrier protein 2~ unknown_gene~ complete;original_location=complement(join(5849598..5849735%2C5849397..5849457%2C5848868..5848970%2C5848691..5848772));owner=coffea | |
| 36792 chr10 manual_curation exon 3212430 3213051 . + . Parent=GSCOCT00034969001 | |
| 36793 chr10 manual_curation exon 3212232 3212334 . + . Parent=GSCOCT00034969001 | |
| 36794 chr10 manual_curation exon 3211745 3211805 . + . Parent=GSCOCT00034969001 | |
| 36795 chr10 manual_curation exon 3211185 3211604 . + . Parent=GSCOCT00034969001 | |
| 36796 chr10 manual_curation CDS 3212430 3212511 . + 2 Parent=GSCOCT00034969001 | |
| 36797 chr10 manual_curation CDS 3212232 3212334 . + 1 Parent=GSCOCT00034969001 | |
| 36798 chr10 manual_curation CDS 3211745 3211805 . + 0 Parent=GSCOCT00034969001 | |
| 36799 chr10 manual_curation CDS 3211467 3211604 . + 0 Parent=GSCOCT00034969001 | |
| 36800 chr10 manual_curation gene 3214896 3216860 . + . ID=GSCOCG00034968001;Name=Cc10_g04170 | |
| 36801 chr10 manual_curation mRNA 3214896 3216860 . + . ID=GSCOCT00034968001;Parent=GSCOCG00034968001;Name=Cc10_g04170 | |
| 36802 chr10 manual_curation polypeptide 3215135 3216748 . + . ID=GSCOCP00034968001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR006046,InterPro:IPR006047,InterPro:IPR006589,InterPro:IPR012850,InterPro:IPR013775,InterPro:IPR013781,InterPro:IPR017853,PFAM:PF00128,PFAM:PF07821,PIR:PIRSF001028,PRINTS:PR00110,SMART:SM00642,SMART:SM00810,SUPERFAMILY:SSF51445,SwissProt:P17859,SwissProt:P27932,SwissProt:P27933,TAIR:AT1G69830.1,TAIR:AT1G76130.1,TAIR:AT4G25000.1,TrEMBL:Q42678,TrEMBL:Q7X9T1,TrEMBL:Q8LP27;Derives_from=GSCOCT00034968001;Name=Cc10_g04170;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004556,GO:0005509,GO:0005975,GO:0043169,CC_EC_number:3.2.1.60,PRODUCT:Alpha-amylase,CC_functional_completeness:complete,CC_gene:AMY1.1,CC_gene:AMY1.3,CC_gene:AMY1.2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034968001~ Alpha-amylase~ AMY1.1~ complete;original_location=complement(join(5845975..5846067%2C5845748..5845880%2C5844801..5845606%2C5844454..5844708));owner=coffea | |
| 36803 chr10 manual_curation exon 3216494 3216860 . + . Parent=GSCOCT00034968001 | |
| 36804 chr10 manual_curation exon 3215596 3216401 . + . Parent=GSCOCT00034968001 | |
| 36805 chr10 manual_curation exon 3215322 3215454 . + . Parent=GSCOCT00034968001 | |
| 36806 chr10 manual_curation exon 3214896 3215227 . + . Parent=GSCOCT00034968001 | |
| 36807 chr10 manual_curation CDS 3216494 3216748 . + 0 Parent=GSCOCT00034968001 | |
| 36808 chr10 manual_curation CDS 3215596 3216401 . + 1 Parent=GSCOCT00034968001 | |
| 36809 chr10 manual_curation CDS 3215322 3215454 . + 0 Parent=GSCOCT00034968001 | |
| 36810 chr10 manual_curation CDS 3215135 3215227 . + 0 Parent=GSCOCT00034968001 | |
| 36811 chr10 manual_curation gene 3218017 3221778 . + . ID=GSCOCG00034967001;Name=Cc10_g04180 | |
| 36812 chr10 manual_curation mRNA 3218017 3221778 . + . ID=GSCOCT00034967001;Parent=GSCOCG00034967001;Name=Cc10_g04180 | |
| 36813 chr10 manual_curation polypeptide 3218017 3221450 . + . ID=GSCOCP00034967001;Dbxref=InterPro:IPR011046,InterPro:IPR013863,PFAM:PF08553,SUPERFAMILY:SSF50978,SwissProt:P40781,SwissProt:Q1MTR3,SwissProt:Q555V7,TAIR:AT3G19240.1,TAIR:AT4G33400.1,TrEMBL:B9MVQ3,TrEMBL:F6GZZ4,TrEMBL:O04394;Derives_from=GSCOCT00034967001;Name=Cc10_g04180;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein CYPRO4,CC_functional_completeness:modules,CC_gene:CYPRO4,CC_gene:vid27,CC_gene:DDB_G0274813;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034967001~ Protein CYPRO4~ CYPRO4~ modules;original_location=complement(join(5841530..5843185%2C5839752..5840042));owner=coffea | |
| 36814 chr10 manual_curation exon 3221160 3221778 . + . Parent=GSCOCT00034967001 | |
| 36815 chr10 manual_curation exon 3218017 3219672 . + . Parent=GSCOCT00034967001 | |
| 36816 chr10 manual_curation CDS 3221160 3221450 . + 0 Parent=GSCOCT00034967001 | |
| 36817 chr10 manual_curation CDS 3218017 3219672 . + 0 Parent=GSCOCT00034967001 | |
| 36818 chr10 manual_curation gene 3222142 3223955 . + . ID=GSCOCG00034966001;Name=Cc10_g04190 | |
| 36819 chr10 manual_curation mRNA 3222142 3223955 . + . ID=GSCOCT00034966001;Parent=GSCOCG00034966001;Name=Cc10_g04190 | |
| 36820 chr10 manual_curation polypeptide 3222176 3223814 . + . ID=GSCOCP00034966001;Dbxref=InterPro:IPR001344,InterPro:IPR022796,PANTHER:PTHR21649,PFAM:PF00504,SwissProt:P10708,SwissProt:P27521,SwissProt:Q9SQL2,TAIR:AT1G45474.1,TAIR:AT3G47470.1,TAIR:AT3G61470.1,TrEMBL:A9XAM1,TrEMBL:B9MVQ2,TrEMBL:E0CP66;Derives_from=GSCOCT00034966001;Name=Cc10_g04190;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Chlorophyll a-b binding protein P4%2C chloroplastic,CC_functional_completeness:modules,CC_gene:lhcA-P4,CC_gene:LHCA4,CC_gene:CAB7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034966001~ Chlorophyll a-b binding protein P4%2C chloroplastic~ lhcA-P4~ modules;original_location=complement(join(5838803..5839026%2C5838565..5838697%2C5838200..5838312%2C5837984..5838088%2C5837746..5837834%2C5837388..5837530));owner=coffea | |
| 36821 chr10 manual_curation exon 3223672 3223955 . + . Parent=GSCOCT00034966001 | |
| 36822 chr10 manual_curation exon 3223368 3223456 . + . Parent=GSCOCT00034966001 | |
| 36823 chr10 manual_curation exon 3223114 3223218 . + . Parent=GSCOCT00034966001 | |
| 36824 chr10 manual_curation exon 3222890 3223002 . + . Parent=GSCOCT00034966001 | |
| 36825 chr10 manual_curation exon 3222505 3222637 . + . Parent=GSCOCT00034966001 | |
| 36826 chr10 manual_curation exon 3222142 3222399 . + . Parent=GSCOCT00034966001 | |
| 36827 chr10 manual_curation CDS 3223672 3223814 . + 1 Parent=GSCOCT00034966001 | |
| 36828 chr10 manual_curation CDS 3223368 3223456 . + 2 Parent=GSCOCT00034966001 | |
| 36829 chr10 manual_curation CDS 3223114 3223218 . + 2 Parent=GSCOCT00034966001 | |
| 36830 chr10 manual_curation CDS 3222890 3223002 . + 0 Parent=GSCOCT00034966001 | |
| 36831 chr10 manual_curation CDS 3222505 3222637 . + 2 Parent=GSCOCT00034966001 | |
| 36832 chr10 manual_curation CDS 3222176 3222399 . + 0 Parent=GSCOCT00034966001 | |
| 36833 chr10 manual_curation gene 3224372 3227773 . - . ID=GSCOCG00034965001;Name=Cc10_g04200 | |
| 36834 chr10 manual_curation mRNA 3224372 3227773 . - . ID=GSCOCT00034965001;Parent=GSCOCG00034965001;Name=Cc10_g04200 | |
| 36835 chr10 manual_curation polypeptide 3224768 3227773 . - . ID=GSCOCP00034965001;Dbxref=InterPro:IPR008545,PFAM:PF05701,SwissProt:O48724,SwissProt:Q9FMN1,SwissProt:Q9SZB6,TAIR:AT2G26570.1,TAIR:AT4G33390.1,TAIR:AT5G42880.1,TrEMBL:B9MVQ1,TrEMBL:B9R7C9,TrEMBL:F6GZZ5;Derives_from=GSCOCT00034965001;Name=Cc10_g04200;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1,CC_functional_completeness:modules,CC_gene:WEB1,CC_gene:WEL1,CC_gene:WEL3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034965001~ Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1~ WEB1~ modules;original_location=join(5833429..5833902%2C5834005..5834301%2C5834560..5836176%2C5836240..5836434);owner=coffea | |
| 36836 chr10 manual_curation exon 3227300 3227773 . - . Parent=GSCOCT00034965001 | |
| 36837 chr10 manual_curation exon 3226901 3227197 . - . Parent=GSCOCT00034965001 | |
| 36838 chr10 manual_curation exon 3225026 3226642 . - . Parent=GSCOCT00034965001 | |
| 36839 chr10 manual_curation exon 3224372 3224962 . - . Parent=GSCOCT00034965001 | |
| 36840 chr10 manual_curation CDS 3227300 3227773 . - 0 Parent=GSCOCT00034965001 | |
| 36841 chr10 manual_curation CDS 3226901 3227197 . - 0 Parent=GSCOCT00034965001 | |
| 36842 chr10 manual_curation CDS 3225026 3226642 . - 0 Parent=GSCOCT00034965001 | |
| 36843 chr10 manual_curation CDS 3224768 3224962 . - 0 Parent=GSCOCT00034965001 | |
| 36844 chr10 manual_curation gene 3233591 3236811 . - . ID=GSCOCG00034964001;Name=Cc10_g04210 | |
| 36845 chr10 manual_curation mRNA 3233591 3236811 . - . ID=GSCOCT00034964001;Parent=GSCOCG00034964001;Name=Cc10_g04210 | |
| 36846 chr10 manual_curation polypeptide 3233809 3236668 . - . ID=GSCOCP00034964001;Dbxref=InterPro:IPR002495,PFAM:PF01501,SwissProt:Q8GWW4,SwissProt:Q8W4A7,SwissProt:Q9LSB1,TAIR:AT1G77130.1,TAIR:AT3G18660.2,TAIR:AT4G33330.2,TrEMBL:B9R7D0,TrEMBL:E0CP69,TrEMBL:I1MXP3;Derives_from=GSCOCT00034964001;Name=Cc10_g04210;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.4.1.186,PRODUCT:UDP-glucuronate,CC_functional_completeness:complete,CC_gene:GUX2,CC_gene:GUX1,CC_gene:GUX3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034964001~ UDP-glucuronate:xylan alpha-glucuronosyltransferase 2~ GUX2~ complete;original_location=join(5824534..5824704%2C5824811..5825447%2C5826453..5827393);owner=coffea | |
| 36847 chr10 manual_curation exon 3236498 3236811 . - . Parent=GSCOCT00034964001 | |
| 36848 chr10 manual_curation exon 3235755 3236391 . - . Parent=GSCOCT00034964001 | |
| 36849 chr10 manual_curation exon 3233591 3234749 . - . Parent=GSCOCT00034964001 | |
| 36850 chr10 manual_curation CDS 3236498 3236668 . - 0 Parent=GSCOCT00034964001 | |
| 36851 chr10 manual_curation CDS 3235755 3236391 . - 0 Parent=GSCOCT00034964001 | |
| 36852 chr10 manual_curation CDS 3233809 3234749 . - 1 Parent=GSCOCT00034964001 | |
| 36853 chr10 manual_curation gene 3238591 3242331 . - . ID=GSCOCG00034963001;Name=Cc10_g04220 | |
| 36854 chr10 manual_curation mRNA 3238591 3242331 . - . ID=GSCOCT00034963001;Parent=GSCOCG00034963001;Name=Cc10_g04220 | |
| 36855 chr10 manual_curation polypeptide 3239253 3242331 . - . ID=GSCOCP00034963001;Dbxref=InterPro:IPR007378,PFAM:PF04278,SwissProt:F4J469,SwissProt:Q9SZB2,SwissProt:Q9ZST9,TAIR:AT3G23710.1,TAIR:AT4G33350.1,TrEMBL:B9GNW7,TrEMBL:B9MVP9,TrEMBL:F6GZZ6;Derives_from=GSCOCT00034963001;Name=Cc10_g04220;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein TIC 22%2C chloroplastic,CC_functional_completeness:complete,CC_gene:TIC22,CC_gene:TIC22L;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034963001~ Protein TIC 22%2C chloroplastic~ TIC22~ complete;original_location=join(5818871..5819326%2C5819396..5819458%2C5819861..5819935%2C5820249..5820299%2C5821125..5821184%2C5821285..5821353%2C5821595..5821630%2C5821857..5821949);owner=coffea | |
| 36856 chr10 manual_curation exon 3238591 3239064 . - . Parent=GSCOCT00034963001 | |
| 36857 chr10 manual_curation exon 3241876 3242331 . - . Parent=GSCOCT00034963001 | |
| 36858 chr10 manual_curation exon 3241744 3241806 . - . Parent=GSCOCT00034963001 | |
| 36859 chr10 manual_curation exon 3241267 3241341 . - . Parent=GSCOCT00034963001 | |
| 36860 chr10 manual_curation exon 3240903 3240953 . - . Parent=GSCOCT00034963001 | |
| 36861 chr10 manual_curation exon 3240018 3240077 . - . Parent=GSCOCT00034963001 | |
| 36862 chr10 manual_curation exon 3239849 3239917 . - . Parent=GSCOCT00034963001 | |
| 36863 chr10 manual_curation exon 3239572 3239607 . - . Parent=GSCOCT00034963001 | |
| 36864 chr10 manual_curation exon 3239228 3239345 . - . Parent=GSCOCT00034963001 | |
| 36865 chr10 manual_curation CDS 3241876 3242331 . - 0 Parent=GSCOCT00034963001 | |
| 36866 chr10 manual_curation CDS 3241744 3241806 . - 0 Parent=GSCOCT00034963001 | |
| 36867 chr10 manual_curation CDS 3241267 3241341 . - 0 Parent=GSCOCT00034963001 | |
| 36868 chr10 manual_curation CDS 3240903 3240953 . - 0 Parent=GSCOCT00034963001 | |
| 36869 chr10 manual_curation CDS 3240018 3240077 . - 0 Parent=GSCOCT00034963001 | |
| 36870 chr10 manual_curation CDS 3239849 3239917 . - 0 Parent=GSCOCT00034963001 | |
| 36871 chr10 manual_curation CDS 3239572 3239607 . - 0 Parent=GSCOCT00034963001 | |
| 36872 chr10 manual_curation CDS 3239253 3239345 . - 0 Parent=GSCOCT00034963001 | |
| 36873 chr10 manual_curation gene 3274402 3274644 . + . ID=GSCOCG00034961001;Name=Cc10_g04230 | |
| 36874 chr10 manual_curation mRNA 3274402 3274644 . + . ID=GSCOCT00034961001;Parent=GSCOCG00034961001;Name=Cc10_g04230 | |
| 36875 chr10 manual_curation polypeptide 3274402 3274644 . + . ID=GSCOCP00034961001;Dbxref=GENE3D:G3DSA:1.10.238.10,InterPro:IPR002048,InterPro:IPR011992,InterPro:IPR018247,InterPro:IPR018248,InterPro:IPR018249,PFAM:PF00036,PROFILE:PS50222,PROSITE:PS00018,SMART:SM00054,TrEMBL:A5AWP9,TrEMBL:B9R7E4,TrEMBL:B9R7E5;Derives_from=GSCOCT00034961001;Name=Cc10_g04230;Ontology_term=CC_evidence_code:ISS,GO:0005509,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034961001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=complement(5786558..5786800);owner=coffea | |
| 36876 chr10 manual_curation exon 3274402 3274644 . + . Parent=GSCOCT00034961001 | |
| 36877 chr10 manual_curation CDS 3274402 3274644 . + 0 Parent=GSCOCT00034961001 | |
| 36878 chr10 manual_curation gene 3281765 3289649 . - . ID=GSCOCG00034958001;Name=Cc10_g04240 | |
| 36879 chr10 manual_curation mRNA 3281765 3289649 . - . ID=GSCOCT00034958001;Parent=GSCOCG00034958001;Name=Cc10_g04240 | |
| 36880 chr10 manual_curation polypeptide 3283171 3289162 . - . ID=GSCOCP00034958001;Dbxref=InterPro:IPR013209,PFAM:PF08235,SMART:SM00775,SwissProt:Q92539,SwissProt:Q99PI5,SwissProt:Q9BQK8,TAIR:AT3G09560.2,TAIR:AT5G42870.1,TrEMBL:B9R7E6,TrEMBL:F6H004,TrEMBL:I1K7Z0;Derives_from=GSCOCT00034958001;Name=Cc10_g04240;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:LPIN2,CC_gene:Lpin2,CC_gene:LPIN3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034958001~ Hypothetical protein~ LPIN2~ missing_functional_completeness;original_location=join(5772040..5772060%2C5772124..5772260%2C5772393..5772482%2C5772590..5772782%2C5773057..5773130%2C5774728..5774812%2C5775173..5775259%2C5775456..5775528%2C5776551..5776594%2C5777347..5777475%2C5777563..5777661%2C5777975..5778031);owner=coffea | |
| 36881 chr10 manual_curation exon 3289142 3289649 . - . Parent=GSCOCT00034958001 | |
| 36882 chr10 manual_curation exon 3288942 3289078 . - . Parent=GSCOCT00034958001 | |
| 36883 chr10 manual_curation exon 3288720 3288809 . - . Parent=GSCOCT00034958001 | |
| 36884 chr10 manual_curation exon 3288420 3288612 . - . Parent=GSCOCT00034958001 | |
| 36885 chr10 manual_curation exon 3288072 3288145 . - . Parent=GSCOCT00034958001 | |
| 36886 chr10 manual_curation exon 3286390 3286474 . - . Parent=GSCOCT00034958001 | |
| 36887 chr10 manual_curation exon 3285943 3286029 . - . Parent=GSCOCT00034958001 | |
| 36888 chr10 manual_curation exon 3285674 3285746 . - . Parent=GSCOCT00034958001 | |
| 36889 chr10 manual_curation exon 3284608 3284651 . - . Parent=GSCOCT00034958001 | |
| 36890 chr10 manual_curation exon 3283727 3283855 . - . Parent=GSCOCT00034958001 | |
| 36891 chr10 manual_curation exon 3283541 3283639 . - . Parent=GSCOCT00034958001 | |
| 36892 chr10 manual_curation exon 3281765 3283227 . - . Parent=GSCOCT00034958001 | |
| 36893 chr10 manual_curation CDS 3289142 3289162 . - 0 Parent=GSCOCT00034958001 | |
| 36894 chr10 manual_curation CDS 3288942 3289078 . - 0 Parent=GSCOCT00034958001 | |
| 36895 chr10 manual_curation CDS 3288720 3288809 . - 2 Parent=GSCOCT00034958001 | |
| 36896 chr10 manual_curation CDS 3288420 3288612 . - 2 Parent=GSCOCT00034958001 | |
| 36897 chr10 manual_curation CDS 3288072 3288145 . - 0 Parent=GSCOCT00034958001 | |
| 36898 chr10 manual_curation CDS 3286390 3286474 . - 2 Parent=GSCOCT00034958001 | |
| 36899 chr10 manual_curation CDS 3285943 3286029 . - 0 Parent=GSCOCT00034958001 | |
| 36900 chr10 manual_curation CDS 3285674 3285746 . - 0 Parent=GSCOCT00034958001 | |
| 36901 chr10 manual_curation CDS 3284608 3284651 . - 1 Parent=GSCOCT00034958001 | |
| 36902 chr10 manual_curation CDS 3283727 3283855 . - 0 Parent=GSCOCT00034958001 | |
| 36903 chr10 manual_curation CDS 3283541 3283639 . - 0 Parent=GSCOCT00034958001 | |
| 36904 chr10 manual_curation CDS 3283171 3283227 . - 0 Parent=GSCOCT00034958001 | |
| 36905 chr10 manual_curation gene 3289766 3291865 . - . ID=GSCOCG00034957001;Name=Cc10_g04250 | |
| 36906 chr10 manual_curation mRNA 3289766 3291865 . - . ID=GSCOCT00034957001;Parent=GSCOCG00034957001;Name=Cc10_g04250 | |
| 36907 chr10 manual_curation polypeptide 3290841 3291214 . - . ID=GSCOCP00034957001;Dbxref=InterPro:IPR007651,PFAM:PF04571,SwissProt:Q7TNN8,SwissProt:Q99PI4,SwissProt:Q9BQK8,TAIR:AT3G09560.2,TAIR:AT5G42870.1,TrEMBL:A5AWQ0,TrEMBL:B9R7E6,TrEMBL:F6H004;Derives_from=GSCOCT00034957001;Name=Cc10_g04250;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Phosphatidate phosphatase LPIN3,CC_functional_completeness:fragment,CC_gene:Lpin3,CC_gene:LPIN3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034957001~ Putative Phosphatidate phosphatase LPIN3~ Lpin3~ fragment;original_location=join(5769988..5770263%2C5770335..5770361);owner=coffea | |
| 36908 chr10 manual_curation exon 3290939 3291865 . - . Parent=GSCOCT00034957001 | |
| 36909 chr10 manual_curation exon 3289766 3290867 . - . Parent=GSCOCT00034957001 | |
| 36910 chr10 manual_curation CDS 3290939 3291214 . - 0 Parent=GSCOCT00034957001 | |
| 36911 chr10 manual_curation CDS 3290841 3290867 . - 0 Parent=GSCOCT00034957001 | |
| 36912 chr10 manual_curation gene 3297718 3300496 . - . ID=GSCOCG00034956001;Name=Cc10_g04260 | |
| 36913 chr10 manual_curation mRNA 3297718 3300496 . - . ID=GSCOCT00034956001;Parent=GSCOCG00034956001;Name=Cc10_g04260 | |
| 36914 chr10 manual_curation polypeptide 3299195 3300247 . - . ID=GSCOCP00034956001;Dbxref=SwissProt:Q9FMZ0,TAIR:AT5G42750.1,TrEMBL:B9GNX0,TrEMBL:B9MVN6,TrEMBL:F6H005;Derives_from=GSCOCT00034956001;Name=Cc10_g04260;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative BRI1 kinase inhibitor 1,CC_functional_completeness:complete,CC_gene:BKI1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034956001~ Putative BRI1 kinase inhibitor 1~ BKI1~ complete;original_location=5760955..5762007;owner=coffea | |
| 36915 chr10 manual_curation exon 3297718 3300496 . - . Parent=GSCOCT00034956001 | |
| 36916 chr10 manual_curation CDS 3299195 3300247 . - 0 Parent=GSCOCT00034956001 | |
| 36917 chr10 manual_curation gene 3304529 3310483 . - . ID=GSCOCG00034955001;Name=Cc10_g04270 | |
| 36918 chr10 manual_curation mRNA 3304529 3310483 . - . ID=GSCOCT00034955001;Parent=GSCOCG00034955001;Name=Cc10_g04270 | |
| 36919 chr10 manual_curation polypeptide 3305136 3309930 . - . ID=GSCOCP00034955001;Dbxref=GENE3D:G3DSA:3.60.40.10,InterPro:IPR001932,InterPro:IPR014045,InterPro:IPR015655,PANTHER:PTHR13832,PFAM:PF00481,SMART:SM00331,SMART:SM00332,SUPERFAMILY:SSF81606,SwissProt:Q6YTI2,SwissProt:Q7XTC7,SwissProt:Q9FX08,TAIR:AT1G09160.2,TAIR:AT1G47380.1,TAIR:AT1G68410.1,TrEMBL:B9MVN4,TrEMBL:B9R7E9,TrEMBL:E0CP76;Derives_from=GSCOCT00034955001;Name=Cc10_g04270;Ontology_term=CC_evidence_code:ISS,GO:0003824,CC_EC_number:3.1.3.16,PRODUCT:Probable protein phosphatase 2C 12,CC_functional_completeness:complete,CC_gene:At1g47380,CC_gene:Os02g0567200,CC_gene:Os04g0449400;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034955001~ Probable protein phosphatase 2C 12~ At1g47380~ complete;original_location=join(5751272..5751469%2C5752439..5752610%2C5753512..5753665%2C5753747..5753810%2C5754697..5754804%2C5755104..5755229%2C5755343..5755578%2C5755756..5755958%2C5756038..5756066);owner=coffea | |
| 36920 chr10 manual_curation exon 3310421 3310483 . - . Parent=GSCOCT00034955001 | |
| 36921 chr10 manual_curation exon 3309733 3310070 . - . Parent=GSCOCT00034955001 | |
| 36922 chr10 manual_curation exon 3308592 3308763 . - . Parent=GSCOCT00034955001 | |
| 36923 chr10 manual_curation exon 3307537 3307690 . - . Parent=GSCOCT00034955001 | |
| 36924 chr10 manual_curation exon 3307392 3307455 . - . Parent=GSCOCT00034955001 | |
| 36925 chr10 manual_curation exon 3306398 3306505 . - . Parent=GSCOCT00034955001 | |
| 36926 chr10 manual_curation exon 3305973 3306098 . - . Parent=GSCOCT00034955001 | |
| 36927 chr10 manual_curation exon 3305624 3305859 . - . Parent=GSCOCT00034955001 | |
| 36928 chr10 manual_curation exon 3305244 3305446 . - . Parent=GSCOCT00034955001 | |
| 36929 chr10 manual_curation exon 3304529 3305164 . - . Parent=GSCOCT00034955001 | |
| 36930 chr10 manual_curation CDS 3309733 3309930 . - 0 Parent=GSCOCT00034955001 | |
| 36931 chr10 manual_curation CDS 3308592 3308763 . - 0 Parent=GSCOCT00034955001 | |
| 36932 chr10 manual_curation CDS 3307537 3307690 . - 1 Parent=GSCOCT00034955001 | |
| 36933 chr10 manual_curation CDS 3307392 3307455 . - 2 Parent=GSCOCT00034955001 | |
| 36934 chr10 manual_curation CDS 3306398 3306505 . - 0 Parent=GSCOCT00034955001 | |
| 36935 chr10 manual_curation CDS 3305973 3306098 . - 0 Parent=GSCOCT00034955001 | |
| 36936 chr10 manual_curation CDS 3305624 3305859 . - 0 Parent=GSCOCT00034955001 | |
| 36937 chr10 manual_curation CDS 3305244 3305446 . - 2 Parent=GSCOCT00034955001 | |
| 36938 chr10 manual_curation CDS 3305136 3305164 . - 1 Parent=GSCOCT00034955001 | |
| 36939 chr10 manual_curation gene 3315126 3318727 . - . ID=GSCOCG00034954001;Name=Cc10_g04280 | |
| 36940 chr10 manual_curation mRNA 3315126 3318727 . - . ID=GSCOCT00034954001;Parent=GSCOCG00034954001;Name=Cc10_g04280 | |
| 36941 chr10 manual_curation polypeptide 3316515 3318572 . - . ID=GSCOCP00034954001;Dbxref=InterPro:IPR003340,PFAM:PF02362,PROFILE:PS50863,SwissProt:Q1G3M3,SwissProt:Q69V36,SwissProt:Q9FMZ4,TAIR:AT3G19184.1,TAIR:AT5G42700.1,TAIR:AT5G58280.1,TrEMBL:B9RYJ7,TrEMBL:F6HQC1,TrEMBL:I1JTI3;Derives_from=GSCOCT00034954001;Name=Cc10_g04280;Ontology_term=CC_evidence_code:ISS,GO:0003677,CC_EC_number:missing_EC_number,PRODUCT:B3 domain-containing protein Os06g0194400,CC_functional_completeness:complete,CC_gene:Os06g0194400,CC_gene:At3g19184,CC_gene:At5g42700;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034954001~ B3 domain-containing protein Os06g0194400~ Os06g0194400~ complete;original_location=join(5742630..5742767%2C5742899..5742994%2C5743140..5743174%2C5743295..5743460%2C5744067..5744273%2C5744622..5744687);owner=coffea | |
| 36942 chr10 manual_curation exon 3315126 3315359 . - . Parent=GSCOCT00034954001 | |
| 36943 chr10 manual_curation exon 3318435 3318727 . - . Parent=GSCOCT00034954001 | |
| 36944 chr10 manual_curation exon 3318208 3318303 . - . Parent=GSCOCT00034954001 | |
| 36945 chr10 manual_curation exon 3318028 3318062 . - . Parent=GSCOCT00034954001 | |
| 36946 chr10 manual_curation exon 3317742 3317907 . - . Parent=GSCOCT00034954001 | |
| 36947 chr10 manual_curation exon 3316929 3317135 . - . Parent=GSCOCT00034954001 | |
| 36948 chr10 manual_curation exon 3316452 3316580 . - . Parent=GSCOCT00034954001 | |
| 36949 chr10 manual_curation CDS 3318435 3318572 . - 0 Parent=GSCOCT00034954001 | |
| 36950 chr10 manual_curation CDS 3318208 3318303 . - 0 Parent=GSCOCT00034954001 | |
| 36951 chr10 manual_curation CDS 3318028 3318062 . - 0 Parent=GSCOCT00034954001 | |
| 36952 chr10 manual_curation CDS 3317742 3317907 . - 2 Parent=GSCOCT00034954001 | |
| 36953 chr10 manual_curation CDS 3316929 3317135 . - 0 Parent=GSCOCT00034954001 | |
| 36954 chr10 manual_curation CDS 3316515 3316580 . - 0 Parent=GSCOCT00034954001 | |
| 36955 chr10 manual_curation gene 3319663 3321857 . - . ID=GSCOCG00034953001;Name=Cc10_g04290 | |
| 36956 chr10 manual_curation mRNA 3319663 3321857 . - . ID=GSCOCT00034953001;Parent=GSCOCG00034953001;Name=Cc10_g04290 | |
| 36957 chr10 manual_curation polypeptide 3319823 3321788 . - . ID=GSCOCP00034953001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR001509,InterPro:IPR016040,PFAM:PF01370,SwissProt:O53454,SwissProt:P55579,SwissProt:P73212,TAIR:AT1G09480.1,TAIR:AT1G09490.1,TAIR:AT4G33360.1,TrEMBL:A5AWQ3,TrEMBL:B9GNX3,TrEMBL:E0CP78;Derives_from=GSCOCT00034953001;Name=Cc10_g04290;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,GO:0044237,GO:0050662,CC_EC_number:1.1.1.219,PRODUCT:Putative dihydroflavonol-4-reductase,CC_functional_completeness:complete,CC_gene:dfrA,CC_gene:Rv1106c,CC_gene:NGR_a02350;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034953001~ Putative dihydroflavonol-4-reductase~ dfrA~ complete;original_location=join(5739414..5739707%2C5739800..5739931%2C5740062..5740229%2C5740520..5740825%2C5741239..5741379);owner=coffea | |
| 36958 chr10 manual_curation exon 3321495 3321857 . - . Parent=GSCOCT00034953001 | |
| 36959 chr10 manual_curation exon 3321271 3321402 . - . Parent=GSCOCT00034953001 | |
| 36960 chr10 manual_curation exon 3320973 3321140 . - . Parent=GSCOCT00034953001 | |
| 36961 chr10 manual_curation exon 3320377 3320682 . - . Parent=GSCOCT00034953001 | |
| 36962 chr10 manual_curation exon 3319663 3319963 . - . Parent=GSCOCT00034953001 | |
| 36963 chr10 manual_curation CDS 3321495 3321788 . - 0 Parent=GSCOCT00034953001 | |
| 36964 chr10 manual_curation CDS 3321271 3321402 . - 0 Parent=GSCOCT00034953001 | |
| 36965 chr10 manual_curation CDS 3320973 3321140 . - 0 Parent=GSCOCT00034953001 | |
| 36966 chr10 manual_curation CDS 3320377 3320682 . - 0 Parent=GSCOCT00034953001 | |
| 36967 chr10 manual_curation CDS 3319823 3319963 . - 0 Parent=GSCOCT00034953001 | |
| 36968 chr10 manual_curation gene 3322561 3326648 . + . ID=GSCOCG00034952001;Name=Cc10_g04300 | |
| 36969 chr10 manual_curation mRNA 3322561 3326648 . + . ID=GSCOCT00034952001;Parent=GSCOCG00034952001;Name=Cc10_g04300 | |
| 36970 chr10 manual_curation polypeptide 3322863 3325995 . + . ID=GSCOCP00034952001;Dbxref=InterPro:IPR008547,PANTHER:PTHR12265,PFAM:PF05705,TAIR:AT2G15695.1,TAIR:AT5G44250.1,TrEMBL:B9GNX4,TrEMBL:B9MVN2,TrEMBL:E0CP79;Derives_from=GSCOCT00034952001;Name=Cc10_g04300;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function DUF829%2C transmembrane 53,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034952001~ Protein of unknown function DUF829%2C transmembrane 53~ unknown_gene~ complete;original_location=complement(join(5738161..5738339%2C5737425..5737482%2C5737250..5737330%2C5737000..5737035%2C5736504..5736743%2C5736275..5736416%2C5735207..5735700));owner=coffea | |
| 36971 chr10 manual_curation exon 3325502 3326648 . + . Parent=GSCOCT00034952001 | |
| 36972 chr10 manual_curation exon 3324786 3324927 . + . Parent=GSCOCT00034952001 | |
| 36973 chr10 manual_curation exon 3324459 3324698 . + . Parent=GSCOCT00034952001 | |
| 36974 chr10 manual_curation exon 3324167 3324202 . + . Parent=GSCOCT00034952001 | |
| 36975 chr10 manual_curation exon 3323872 3323952 . + . Parent=GSCOCT00034952001 | |
| 36976 chr10 manual_curation exon 3323720 3323777 . + . Parent=GSCOCT00034952001 | |
| 36977 chr10 manual_curation exon 3322561 3323041 . + . Parent=GSCOCT00034952001 | |
| 36978 chr10 manual_curation CDS 3325502 3325995 . + 1 Parent=GSCOCT00034952001 | |
| 36979 chr10 manual_curation CDS 3324786 3324927 . + 0 Parent=GSCOCT00034952001 | |
| 36980 chr10 manual_curation CDS 3324459 3324698 . + 0 Parent=GSCOCT00034952001 | |
| 36981 chr10 manual_curation CDS 3324167 3324202 . + 0 Parent=GSCOCT00034952001 | |
| 36982 chr10 manual_curation CDS 3323872 3323952 . + 0 Parent=GSCOCT00034952001 | |
| 36983 chr10 manual_curation CDS 3323720 3323777 . + 2 Parent=GSCOCT00034952001 | |
| 36984 chr10 manual_curation CDS 3322863 3323041 . + 0 Parent=GSCOCT00034952001 | |
| 36985 chr10 manual_curation gene 3327461 3330333 . - . ID=GSCOCG00034951001;Name=Cc10_g04310 | |
| 36986 chr10 manual_curation mRNA 3327461 3330333 . - . ID=GSCOCT00034951001;Parent=GSCOCG00034951001;Name=Cc10_g04310 | |
| 36987 chr10 manual_curation polypeptide 3327845 3330263 . - . ID=GSCOCP00034951001;Dbxref=InterPro:IPR007220,PANTHER:PTHR14052,PFAM:PF04084,SwissProt:Q13416,SwissProt:Q38899,SwissProt:Q75PQ8,TAIR:AT2G37560.1,TrEMBL:B9SP26,TrEMBL:G7I3N6,TrEMBL:I1M8L4;Derives_from=GSCOCT00034951001;Name=Cc10_g04310;Ontology_term=CC_evidence_code:ISS,GO:0000808,GO:0005634,GO:0006260,CC_EC_number:missing_EC_number,PRODUCT:Origin recognition complex subunit 2,CC_functional_completeness:complete,CC_gene:ORC2,CC_gene:Orc2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034951001~ Origin recognition complex subunit 2~ ORC2~ complete;original_location=join(5730939..5731067%2C5731164..5731270%2C5731391..5731523%2C5732367..5732661%2C5732847..5732974%2C5733042..5733078%2C5733158..5733357);owner=coffea | |
| 36988 chr10 manual_curation exon 3330135 3330333 . - . Parent=GSCOCT00034951001 | |
| 36989 chr10 manual_curation exon 3329932 3330038 . - . Parent=GSCOCT00034951001 | |
| 36990 chr10 manual_curation exon 3329679 3329811 . - . Parent=GSCOCT00034951001 | |
| 36991 chr10 manual_curation exon 3328541 3328835 . - . Parent=GSCOCT00034951001 | |
| 36992 chr10 manual_curation exon 3328228 3328355 . - . Parent=GSCOCT00034951001 | |
| 36993 chr10 manual_curation exon 3328124 3328160 . - . Parent=GSCOCT00034951001 | |
| 36994 chr10 manual_curation exon 3327461 3328044 . - . Parent=GSCOCT00034951001 | |
| 36995 chr10 manual_curation CDS 3330135 3330263 . - 0 Parent=GSCOCT00034951001 | |
| 36996 chr10 manual_curation CDS 3329932 3330038 . - 0 Parent=GSCOCT00034951001 | |
| 36997 chr10 manual_curation CDS 3329679 3329811 . - 2 Parent=GSCOCT00034951001 | |
| 36998 chr10 manual_curation CDS 3328541 3328835 . - 0 Parent=GSCOCT00034951001 | |
| 36999 chr10 manual_curation CDS 3328228 3328355 . - 1 Parent=GSCOCT00034951001 | |
| 37000 chr10 manual_curation CDS 3328124 3328160 . - 0 Parent=GSCOCT00034951001 | |
| 37001 chr10 manual_curation CDS 3327845 3328044 . - 1 Parent=GSCOCT00034951001 | |
| 37002 chr10 manual_curation gene 3332852 3339213 . + . ID=GSCOCG00034950001;Name=Cc10_g04320 | |
| 37003 chr10 manual_curation mRNA 3332852 3339213 . + . ID=GSCOCT00034950001;Parent=GSCOCG00034950001;Name=Cc10_g04320 | |
| 37004 chr10 manual_curation polypeptide 3333251 3338916 . + . ID=GSCOCP00034950001;Dbxref=TAIR:AT4G33380.1,TrEMBL:B9GNX5,TrEMBL:B9R7F2,TrEMBL:E0CP81;Derives_from=GSCOCT00034950001;Name=Cc10_g04320;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B Has 194 Blast hits to 189 proteins in 23 species,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034950001~ unknown protein%3B Has 194 Blast hits to 189 proteins in 23 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 184%3B Viruses - 0%3B Other Eukaryotes - 10 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(5727759..5727951%2C5727456..5727544%2C5727191..5727329%2C5723935..5724033%2C5723076..5723198%2C5722532..5722794%2C5722286..5722396));owner=coffea | |
| 37005 chr10 manual_curation exon 3338806 3339213 . + . Parent=GSCOCT00034950001 | |
| 37006 chr10 manual_curation exon 3338408 3338670 . + . Parent=GSCOCT00034950001 | |
| 37007 chr10 manual_curation exon 3338004 3338126 . + . Parent=GSCOCT00034950001 | |
| 37008 chr10 manual_curation exon 3337169 3337267 . + . Parent=GSCOCT00034950001 | |
| 37009 chr10 manual_curation exon 3333873 3334011 . + . Parent=GSCOCT00034950001 | |
| 37010 chr10 manual_curation exon 3333658 3333746 . + . Parent=GSCOCT00034950001 | |
| 37011 chr10 manual_curation exon 3332852 3333443 . + . Parent=GSCOCT00034950001 | |
| 37012 chr10 manual_curation CDS 3338806 3338916 . + 0 Parent=GSCOCT00034950001 | |
| 37013 chr10 manual_curation CDS 3338408 3338670 . + 1 Parent=GSCOCT00034950001 | |
| 37014 chr10 manual_curation CDS 3338004 3338126 . + 1 Parent=GSCOCT00034950001 | |
| 37015 chr10 manual_curation CDS 3337169 3337267 . + 1 Parent=GSCOCT00034950001 | |
| 37016 chr10 manual_curation CDS 3333873 3334011 . + 0 Parent=GSCOCT00034950001 | |
| 37017 chr10 manual_curation CDS 3333658 3333746 . + 1 Parent=GSCOCT00034950001 | |
| 37018 chr10 manual_curation CDS 3333251 3333443 . + 0 Parent=GSCOCT00034950001 | |
| 37019 chr10 manual_curation gene 3341444 3342142 . + . ID=GSCOCG00034948001;Name=Cc10_g04330 | |
| 37020 chr10 manual_curation mRNA 3341444 3342142 . + . ID=GSCOCT00034948001;Parent=GSCOCG00034948001;Name=Cc10_g04330 | |
| 37021 chr10 manual_curation polypeptide 3341444 3341992 . + . ID=GSCOCP00034948001;Dbxref=GENE3D:G3DSA:1.10.287.110,InterPro:IPR001623,InterPro:IPR007872,InterPro:IPR018253,PFAM:PF00226,PFAM:PF05207,PROFILE:PS50076,PROFILE:PS51074,PROSITE:PS00636,SMART:SM00271,SUPERFAMILY:SSF46565,SwissProt:Q54CI5,TAIR:AT4G10130.1,TrEMBL:B9MVN0,TrEMBL:B9R7F3,TrEMBL:F6HDU0;Derives_from=GSCOCT00034948001;Name=Cc10_g04330;Ontology_term=CC_evidence_code:ISS,GO:0031072,CC_EC_number:missing_EC_number,PRODUCT:Putative DPH4 homolog,CC_functional_completeness:complete,CC_gene:dph4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034948001~ Putative DPH4 homolog~ dph4~ complete;original_location=complement(5719210..5719758);owner=coffea | |
| 37022 chr10 manual_curation exon 3341444 3342142 . + . Parent=GSCOCT00034948001 | |
| 37023 chr10 manual_curation CDS 3341444 3341992 . + 0 Parent=GSCOCT00034948001 | |
| 37024 chr10 manual_curation gene 3345936 3346941 . + . ID=GSCOCG00034946001;Name=Cc10_g04340 | |
| 37025 chr10 manual_curation mRNA 3345936 3346941 . + . ID=GSCOCT00034946001;Parent=GSCOCG00034946001;Name=Cc10_g04340 | |
| 37026 chr10 manual_curation polypeptide 3345936 3346817 . + . ID=GSCOCP00034946001;Dbxref=TAIR:AT1G47410.1,TrEMBL:B9GNX6,TrEMBL:B9MVM8,TrEMBL:F6H007;Derives_from=GSCOCT00034946001;Name=Cc10_g04340;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B Has 26 Blast hits to 26 proteins in 10 species,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034946001~ Putative unknown protein%3B Has 26 Blast hits to 26 proteins in 10 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 26%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ modules;original_location=complement(join(5715015..5715266%2C5714385..5714828));owner=coffea | |
| 37027 chr10 manual_curation exon 3346374 3346941 . + . Parent=GSCOCT00034946001 | |
| 37028 chr10 manual_curation exon 3345936 3346187 . + . Parent=GSCOCT00034946001 | |
| 37029 chr10 manual_curation CDS 3346374 3346817 . + 0 Parent=GSCOCT00034946001 | |
| 37030 chr10 manual_curation CDS 3345936 3346187 . + 0 Parent=GSCOCT00034946001 | |
| 37031 chr10 manual_curation gene 3347553 3350201 . - . ID=GSCOCG00034945001;Name=Cc10_g04350 | |
| 37032 chr10 manual_curation mRNA 3347553 3350201 . - . ID=GSCOCT00034945001;Parent=GSCOCG00034945001;Name=Cc10_g04350 | |
| 37033 chr10 manual_curation polypeptide 3347937 3350118 . - . ID=GSCOCP00034945001;Dbxref=SwissProt:Q9SX77,TAIR:AT1G47420.1,TrEMBL:A9P908,TrEMBL:A9PIW9,TrEMBL:I1M8K9;Derives_from=GSCOCT00034945001;Name=Cc10_g04350;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterized protein At1g47420%2C mitochondrial,CC_functional_completeness:fragment,CC_gene:At1g47420;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034945001~ Uncharacterized protein At1g47420%2C mitochondrial~ At1g47420~ fragment;original_location=join(5711084..5711261%2C5712147..5712457%2C5712544..5712729%2C5713209..5713265);owner=coffea | |
| 37034 chr10 manual_curation exon 3349941 3350201 . - . Parent=GSCOCT00034945001 | |
| 37035 chr10 manual_curation exon 3348745 3349055 . - . Parent=GSCOCT00034945001 | |
| 37036 chr10 manual_curation exon 3348473 3348658 . - . Parent=GSCOCT00034945001 | |
| 37037 chr10 manual_curation exon 3347553 3347993 . - . Parent=GSCOCT00034945001 | |
| 37038 chr10 manual_curation CDS 3349941 3350118 . - 0 Parent=GSCOCT00034945001 | |
| 37039 chr10 manual_curation CDS 3348745 3349055 . - 1 Parent=GSCOCT00034945001 | |
| 37040 chr10 manual_curation CDS 3348473 3348658 . - 0 Parent=GSCOCT00034945001 | |
| 37041 chr10 manual_curation CDS 3347937 3347993 . - 0 Parent=GSCOCT00034945001 | |
| 37042 chr10 manual_curation gene 3350759 3356474 . + . ID=GSCOCG00034944001;Name=Cc10_g04360 | |
| 37043 chr10 manual_curation mRNA 3350759 3356474 . + . ID=GSCOCT00034944001;Parent=GSCOCG00034944001;Name=Cc10_g04360 | |
| 37044 chr10 manual_curation polypeptide 3350759 3356474 . + . ID=GSCOCP00034944001;Dbxref=InterPro:IPR002168,InterPro:IPR013094,PFAM:PF07859,PROSITE:PS01173,SwissProt:Q9FX94,SwissProt:Q9SMN0,SwissProt:Q9ZQ91,TAIR:AT1G47480.1,TAIR:AT1G49660.1,TAIR:AT2G03550.1,TrEMBL:B9R7F7,TrEMBL:F6H008,TrEMBL:F6H009;Derives_from=GSCOCT00034944001;Name=Cc10_g04360;Ontology_term=CC_evidence_code:ISS,GO:0008152,GO:0016787,CC_EC_number:missing_EC_number,PRODUCT:Putative alpha/beta-Hydrolases superfamily protein,CC_functional_completeness:fragment,CC_gene:CXE5,CC_gene:CXE7,CC_gene:CXE12;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034944001~ Putative alpha/beta-Hydrolases superfamily protein~ CXE5~ fragment;original_location=complement(join(5710414..5710443%2C5710160..5710240%2C5707681..5707699%2C5705038..5705239%2C5704728..5704902));owner=coffea | |
| 37045 chr10 manual_curation exon 3356300 3356474 . + . Parent=GSCOCT00034944001 | |
| 37046 chr10 manual_curation exon 3355963 3356164 . + . Parent=GSCOCT00034944001 | |
| 37047 chr10 manual_curation exon 3353503 3353521 . + . Parent=GSCOCT00034944001 | |
| 37048 chr10 manual_curation exon 3350962 3351042 . + . Parent=GSCOCT00034944001 | |
| 37049 chr10 manual_curation exon 3350759 3350788 . + . Parent=GSCOCT00034944001 | |
| 37050 chr10 manual_curation CDS 3356300 3356474 . + 2 Parent=GSCOCT00034944001 | |
| 37051 chr10 manual_curation CDS 3355963 3356164 . + 1 Parent=GSCOCT00034944001 | |
| 37052 chr10 manual_curation CDS 3353503 3353521 . + 0 Parent=GSCOCT00034944001 | |
| 37053 chr10 manual_curation CDS 3350962 3351042 . + 0 Parent=GSCOCT00034944001 | |
| 37054 chr10 manual_curation CDS 3350759 3350788 . + 0 Parent=GSCOCT00034944001 | |
| 37055 chr10 manual_curation gene 3358809 3359777 . + . ID=GSCOCG00034943001;Name=Cc10_g04370 | |
| 37056 chr10 manual_curation mRNA 3358809 3359777 . + . ID=GSCOCT00034943001;Parent=GSCOCG00034943001;Name=Cc10_g04370 | |
| 37057 chr10 manual_curation polypeptide 3358809 3359777 . + . ID=GSCOCP00034943001;Dbxref=InterPro:IPR013094,PFAM:PF07859,SwissProt:Q9SMM9,SwissProt:Q9SX78,SwissProt:Q9ZQ91,TAIR:AT1G47480.1,TAIR:AT2G03550.1,TAIR:AT3G48700.1,TrEMBL:F6H009,TrEMBL:G5DCY5,TrEMBL:I1K7Y1;Derives_from=GSCOCT00034943001;Name=Cc10_g04370;Ontology_term=CC_evidence_code:ISS,GO:0008152,GO:0016787,CC_EC_number:3.1.1.3,PRODUCT:Probable carboxylesterase 2,CC_functional_completeness:complete,CC_gene:CXE2,CC_gene:CXE13,CC_gene:CXE7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034943001~ Probable carboxylesterase 2~ CXE2~ complete;original_location=complement(5701425..5702393);owner=coffea | |
| 37058 chr10 manual_curation exon 3358809 3359777 . + . Parent=GSCOCT00034943001 | |
| 37059 chr10 manual_curation CDS 3358809 3359777 . + 0 Parent=GSCOCT00034943001 | |
| 37060 chr10 manual_curation gene 3360136 3363690 . - . ID=GSCOCG00034942001;Name=Cc10_g04380 | |
| 37061 chr10 manual_curation mRNA 3360136 3363690 . - . ID=GSCOCT00034942001;Parent=GSCOCG00034942001;Name=Cc10_g04380 | |
| 37062 chr10 manual_curation polypeptide 3360401 3363593 . - . ID=GSCOCP00034942001;Dbxref=InterPro:IPR000555,PFAM:PF01398,SMART:SM00232,SwissProt:O00487,SwissProt:O35593,SwissProt:Q9LT08,TAIR:AT1G22920.1,TAIR:AT1G71230.1,TAIR:AT5G23540.1,TrEMBL:A9PHG3,TrEMBL:B9MVM3,TrEMBL:B9R7G0;Derives_from=GSCOCT00034942001;Name=Cc10_g04380;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:26S proteasome non-ATPase regulatory subunit 14,CC_functional_completeness:complete,CC_gene:RPN11,CC_gene:Psmd14,CC_gene:PSMD14;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034942001~ 26S proteasome non-ATPase regulatory subunit 14~ RPN11~ complete;original_location=join(5697609..5697750%2C5697888..5698065%2C5699378..5699459%2C5700072..5700248%2C5700340..5700507%2C5700610..5700801);owner=coffea | |
| 37063 chr10 manual_curation exon 3363452 3363690 . - . Parent=GSCOCT00034942001 | |
| 37064 chr10 manual_curation exon 3363137 3363314 . - . Parent=GSCOCT00034942001 | |
| 37065 chr10 manual_curation exon 3361743 3361824 . - . Parent=GSCOCT00034942001 | |
| 37066 chr10 manual_curation exon 3360954 3361130 . - . Parent=GSCOCT00034942001 | |
| 37067 chr10 manual_curation exon 3360695 3360862 . - . Parent=GSCOCT00034942001 | |
| 37068 chr10 manual_curation exon 3360136 3360592 . - . Parent=GSCOCT00034942001 | |
| 37069 chr10 manual_curation CDS 3363452 3363593 . - 0 Parent=GSCOCT00034942001 | |
| 37070 chr10 manual_curation CDS 3363137 3363314 . - 1 Parent=GSCOCT00034942001 | |
| 37071 chr10 manual_curation CDS 3361743 3361824 . - 2 Parent=GSCOCT00034942001 | |
| 37072 chr10 manual_curation CDS 3360954 3361130 . - 0 Parent=GSCOCT00034942001 | |
| 37073 chr10 manual_curation CDS 3360695 3360862 . - 0 Parent=GSCOCT00034942001 | |
| 37074 chr10 manual_curation CDS 3360401 3360592 . - 0 Parent=GSCOCT00034942001 | |
| 37075 chr10 manual_curation gene 3374917 3377421 . + . ID=GSCOCG00034941001;Name=Cc10_g04390 | |
| 37076 chr10 manual_curation mRNA 3374917 3377421 . + . ID=GSCOCT00034941001;Parent=GSCOCG00034941001;Name=Cc10_g04390 | |
| 37077 chr10 manual_curation polypeptide 3375056 3377228 . + . ID=GSCOCP00034941001;Dbxref=InterPro:IPR002641,InterPro:IPR016035,PFAM:PF01734,SUPERFAMILY:SSF52151,SwissProt:P15478,SwissProt:Q2MY58,SwissProt:Q3YJT2,TAIR:AT2G26560.1,TAIR:AT4G37050.1,TAIR:AT4G37070.2,TrEMBL:E0CP87,TrEMBL:E0CP91,TrEMBL:F6H012;Derives_from=GSCOCT00034941001;Name=Cc10_g04390;Ontology_term=CC_evidence_code:ISS,GO:0006629,GO:0008152,CC_EC_number:missing_EC_number,PRODUCT:Patatin group A-3,CC_functional_completeness:complete,CC_gene:pat2-k2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034941001~ Patatin group A-3~ pat2-k2~ complete;original_location=complement(join(5686015..5686146%2C5685687..5685868%2C5685385..5685574%2C5685118..5685279%2C5684691..5684993%2C5684381..5684553%2C5683974..5684055));owner=coffea | |
| 37078 chr10 manual_curation exon 3377147 3377421 . + . Parent=GSCOCT00034941001 | |
| 37079 chr10 manual_curation exon 3376649 3376821 . + . Parent=GSCOCT00034941001 | |
| 37080 chr10 manual_curation exon 3376209 3376511 . + . Parent=GSCOCT00034941001 | |
| 37081 chr10 manual_curation exon 3375923 3376084 . + . Parent=GSCOCT00034941001 | |
| 37082 chr10 manual_curation exon 3375628 3375817 . + . Parent=GSCOCT00034941001 | |
| 37083 chr10 manual_curation exon 3375334 3375515 . + . Parent=GSCOCT00034941001 | |
| 37084 chr10 manual_curation exon 3374917 3375187 . + . Parent=GSCOCT00034941001 | |
| 37085 chr10 manual_curation CDS 3377147 3377228 . + 2 Parent=GSCOCT00034941001 | |
| 37086 chr10 manual_curation CDS 3376649 3376821 . + 0 Parent=GSCOCT00034941001 | |
| 37087 chr10 manual_curation CDS 3376209 3376511 . + 0 Parent=GSCOCT00034941001 | |
| 37088 chr10 manual_curation CDS 3375923 3376084 . + 0 Parent=GSCOCT00034941001 | |
| 37089 chr10 manual_curation CDS 3375628 3375817 . + 2 Parent=GSCOCT00034941001 | |
| 37090 chr10 manual_curation CDS 3375334 3375515 . + 0 Parent=GSCOCT00034941001 | |
| 37091 chr10 manual_curation CDS 3375056 3375187 . + 0 Parent=GSCOCT00034941001 | |
| 37092 chr10 manual_curation gene 3388865 3389002 . + . ID=GSCOCG00034939001;Name=Cc10_g04400 | |
| 37093 chr10 manual_curation mRNA 3388865 3389002 . + . ID=GSCOCT00034939001;Parent=GSCOCG00034939001;Name=Cc10_g04400 | |
| 37094 chr10 manual_curation polypeptide 3388865 3389002 . + . ID=GSCOCP00034939001;Dbxref=InterPro:IPR016035,SUPERFAMILY:SSF52151;Derives_from=GSCOCT00034939001;Name=Cc10_g04400;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034939001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(5672200..5672337);owner=coffea | |
| 37095 chr10 manual_curation exon 3388865 3389002 . + . Parent=GSCOCT00034939001 | |
| 37096 chr10 manual_curation CDS 3388865 3389002 . + 0 Parent=GSCOCT00034939001 | |
| 37097 chr10 manual_curation gene 3389471 3391784 . + . ID=GSCOCG00034938001;Name=Cc10_g04410 | |
| 37098 chr10 manual_curation mRNA 3389471 3391784 . + . ID=GSCOCT00034938001;Parent=GSCOCG00034938001;Name=Cc10_g04410 | |
| 37099 chr10 manual_curation polypeptide 3389471 3391705 . + . ID=GSCOCP00034938001;Dbxref=InterPro:IPR002641,InterPro:IPR016035,PFAM:PF01734,SUPERFAMILY:SSF52151,SwissProt:P15478,SwissProt:Q2MY58,SwissProt:Q3YJT2,TAIR:AT2G26560.1,TAIR:AT4G37060.2,TAIR:AT4G37070.2,TrEMBL:B9R7G5,TrEMBL:E0CP87,TrEMBL:F6H012;Derives_from=GSCOCT00034938001;Name=Cc10_g04410;Ontology_term=CC_evidence_code:ISS,GO:0006629,GO:0008152,CC_EC_number:missing_EC_number,PRODUCT:Putative Patatin group A-3,CC_functional_completeness:complete,CC_gene:pat2-k2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034938001~ Putative Patatin group A-3~ pat2-k2~ complete;original_location=complement(join(5671641..5671731%2C5671410..5671522%2C5671058..5671239%2C5670717..5670903%2C5670453..5670614%2C5670028..5670327%2C5669666..5669838%2C5669497..5669584));owner=coffea | |
| 37100 chr10 manual_curation exon 3391618 3391784 . + . Parent=GSCOCT00034938001 | |
| 37101 chr10 manual_curation exon 3391364 3391536 . + . Parent=GSCOCT00034938001 | |
| 37102 chr10 manual_curation exon 3390875 3391174 . + . Parent=GSCOCT00034938001 | |
| 37103 chr10 manual_curation exon 3390588 3390749 . + . Parent=GSCOCT00034938001 | |
| 37104 chr10 manual_curation exon 3390299 3390485 . + . Parent=GSCOCT00034938001 | |
| 37105 chr10 manual_curation exon 3389963 3390144 . + . Parent=GSCOCT00034938001 | |
| 37106 chr10 manual_curation exon 3389680 3389792 . + . Parent=GSCOCT00034938001 | |
| 37107 chr10 manual_curation exon 3389471 3389561 . + . Parent=GSCOCT00034938001 | |
| 37108 chr10 manual_curation CDS 3391618 3391705 . + 2 Parent=GSCOCT00034938001 | |
| 37109 chr10 manual_curation CDS 3391364 3391536 . + 0 Parent=GSCOCT00034938001 | |
| 37110 chr10 manual_curation CDS 3390875 3391174 . + 0 Parent=GSCOCT00034938001 | |
| 37111 chr10 manual_curation CDS 3390588 3390749 . + 0 Parent=GSCOCT00034938001 | |
| 37112 chr10 manual_curation CDS 3390299 3390485 . + 2 Parent=GSCOCT00034938001 | |
| 37113 chr10 manual_curation CDS 3389963 3390144 . + 0 Parent=GSCOCT00034938001 | |
| 37114 chr10 manual_curation CDS 3389680 3389792 . + 1 Parent=GSCOCT00034938001 | |
| 37115 chr10 manual_curation CDS 3389471 3389561 . + 0 Parent=GSCOCT00034938001 | |
| 37116 chr10 manual_curation gene 3401018 3403061 . + . ID=GSCOCG00034937001;Name=Cc10_g04420 | |
| 37117 chr10 manual_curation mRNA 3401018 3403061 . + . ID=GSCOCT00034937001;Parent=GSCOCG00034937001;Name=Cc10_g04420 | |
| 37118 chr10 manual_curation polypeptide 3401018 3403061 . + . ID=GSCOCP00034937001;Dbxref=InterPro:IPR016035,SUPERFAMILY:SSF52151,SwissProt:P15478,SwissProt:Q2MY48,SwissProt:Q3YJT5,TAIR:AT2G26560.1,TAIR:AT4G37060.2,TAIR:AT4G37070.2,TrEMBL:A5AGL6,TrEMBL:F6H012,TrEMBL:F6H013;Derives_from=GSCOCT00034937001;Name=Cc10_g04420;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:missing_EC_number,PRODUCT:phospholipase A 2A,CC_functional_completeness:fragment,CC_gene:pat1-k1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034937001~ phospholipase A 2A~ pat1-k1~ fragment;original_location=complement(join(5660132..5660184%2C5659885..5659953%2C5659723..5659766%2C5659418..5659576%2C5659250..5659312%2C5658944..5659205%2C5658141..5658327));owner=coffea | |
| 37119 chr10 manual_curation exon 3402875 3403061 . + . Parent=GSCOCT00034937001 | |
| 37120 chr10 manual_curation exon 3401997 3402258 . + . Parent=GSCOCT00034937001 | |
| 37121 chr10 manual_curation exon 3401890 3401952 . + . Parent=GSCOCT00034937001 | |
| 37122 chr10 manual_curation exon 3401626 3401784 . + . Parent=GSCOCT00034937001 | |
| 37123 chr10 manual_curation exon 3401436 3401479 . + . Parent=GSCOCT00034937001 | |
| 37124 chr10 manual_curation exon 3401249 3401317 . + . Parent=GSCOCT00034937001 | |
| 37125 chr10 manual_curation exon 3401018 3401070 . + . Parent=GSCOCT00034937001 | |
| 37126 chr10 manual_curation CDS 3402875 3403061 . + 2 Parent=GSCOCT00034937001 | |
| 37127 chr10 manual_curation CDS 3401997 3402258 . + 1 Parent=GSCOCT00034937001 | |
| 37128 chr10 manual_curation CDS 3401890 3401952 . + 1 Parent=GSCOCT00034937001 | |
| 37129 chr10 manual_curation CDS 3401626 3401784 . + 1 Parent=GSCOCT00034937001 | |
| 37130 chr10 manual_curation CDS 3401436 3401479 . + 2 Parent=GSCOCT00034937001 | |
| 37131 chr10 manual_curation CDS 3401249 3401317 . + 2 Parent=GSCOCT00034937001 | |
| 37132 chr10 manual_curation CDS 3401018 3401070 . + 0 Parent=GSCOCT00034937001 | |
| 37133 chr10 manual_curation gene 3411911 3414633 . + . ID=GSCOCG00034935001;Name=Cc10_g04430 | |
| 37134 chr10 manual_curation mRNA 3411911 3414633 . + . ID=GSCOCT00034935001;Parent=GSCOCG00034935001;Name=Cc10_g04430 | |
| 37135 chr10 manual_curation polypeptide 3412134 3414287 . + . ID=GSCOCP00034935001;Dbxref=InterPro:IPR002641,InterPro:IPR016035,PFAM:PF01734,SUPERFAMILY:SSF52151,SwissProt:P15478,SwissProt:Q2MY58,SwissProt:Q3YJT2,TAIR:AT2G26560.1,TAIR:AT4G37050.1,TAIR:AT4G37070.2,TrEMBL:E0CP87,TrEMBL:E0CP91,TrEMBL:F6H012;Derives_from=GSCOCT00034935001;Name=Cc10_g04430;Ontology_term=CC_evidence_code:ISS,GO:0006629,GO:0008152,CC_EC_number:missing_EC_number,PRODUCT:Putative Patatin group A-3,CC_functional_completeness:complete,CC_gene:pat2-k2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034935001~ Putative Patatin group A-3~ pat2-k2~ complete;original_location=complement(join(5648937..5649068%2C5648584..5648765%2C5648279..5648468%2C5648015..5648176%2C5647606..5647905%2C5647234..5647406%2C5646915..5646975));owner=coffea | |
| 37136 chr10 manual_curation exon 3414227 3414633 . + . Parent=GSCOCT00034935001 | |
| 37137 chr10 manual_curation exon 3413796 3413968 . + . Parent=GSCOCT00034935001 | |
| 37138 chr10 manual_curation exon 3413297 3413596 . + . Parent=GSCOCT00034935001 | |
| 37139 chr10 manual_curation exon 3413026 3413187 . + . Parent=GSCOCT00034935001 | |
| 37140 chr10 manual_curation exon 3412734 3412923 . + . Parent=GSCOCT00034935001 | |
| 37141 chr10 manual_curation exon 3412437 3412618 . + . Parent=GSCOCT00034935001 | |
| 37142 chr10 manual_curation exon 3411911 3412265 . + . Parent=GSCOCT00034935001 | |
| 37143 chr10 manual_curation CDS 3414227 3414287 . + 2 Parent=GSCOCT00034935001 | |
| 37144 chr10 manual_curation CDS 3413796 3413968 . + 0 Parent=GSCOCT00034935001 | |
| 37145 chr10 manual_curation CDS 3413297 3413596 . + 0 Parent=GSCOCT00034935001 | |
| 37146 chr10 manual_curation CDS 3413026 3413187 . + 0 Parent=GSCOCT00034935001 | |
| 37147 chr10 manual_curation CDS 3412734 3412923 . + 2 Parent=GSCOCT00034935001 | |
| 37148 chr10 manual_curation CDS 3412437 3412618 . + 0 Parent=GSCOCT00034935001 | |
| 37149 chr10 manual_curation CDS 3412134 3412265 . + 0 Parent=GSCOCT00034935001 | |
| 37150 chr10 manual_curation gene 3418490 3422838 . - . ID=GSCOCG00034934001;Name=Cc10_g04440 | |
| 37151 chr10 manual_curation mRNA 3418490 3422838 . - . ID=GSCOCT00034934001;Parent=GSCOCG00034934001;Name=Cc10_g04440 | |
| 37152 chr10 manual_curation polypeptide 3418811 3422222 . - . ID=GSCOCP00034934001;Dbxref=InterPro:IPR002641,InterPro:IPR016035,PFAM:PF01734,SUPERFAMILY:SSF52151,SwissProt:Q2MY58,SwissProt:Q3YJT2,SwissProt:Q42502,TAIR:AT2G26560.1,TAIR:AT4G37060.2,TAIR:AT4G37070.2,TrEMBL:B9R7G5,TrEMBL:E0CP92,TrEMBL:G7I4H1;Derives_from=GSCOCT00034934001;Name=Cc10_g04440;Ontology_term=CC_evidence_code:ISS,GO:0006629,GO:0008152,CC_EC_number:missing_EC_number,PRODUCT:Putative Patatin group A-3,CC_functional_completeness:complete,CC_gene:pat2-k2,CC_gene:pat2-k3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034934001~ Putative Patatin group A-3~ pat2-k2~ complete;original_location=join(5638980..5639120%2C5639367..5639548%2C5639660..5639846%2C5640491..5640652%2C5641539..5642017%2C5642301..5642391);owner=coffea | |
| 37153 chr10 manual_curation exon 3422082 3422838 . - . Parent=GSCOCT00034934001 | |
| 37154 chr10 manual_curation exon 3421654 3421835 . - . Parent=GSCOCT00034934001 | |
| 37155 chr10 manual_curation exon 3421356 3421542 . - . Parent=GSCOCT00034934001 | |
| 37156 chr10 manual_curation exon 3420550 3420711 . - . Parent=GSCOCT00034934001 | |
| 37157 chr10 manual_curation exon 3419185 3419663 . - . Parent=GSCOCT00034934001 | |
| 37158 chr10 manual_curation exon 3418490 3418901 . - . Parent=GSCOCT00034934001 | |
| 37159 chr10 manual_curation CDS 3422082 3422222 . - 0 Parent=GSCOCT00034934001 | |
| 37160 chr10 manual_curation CDS 3421654 3421835 . - 0 Parent=GSCOCT00034934001 | |
| 37161 chr10 manual_curation CDS 3421356 3421542 . - 2 Parent=GSCOCT00034934001 | |
| 37162 chr10 manual_curation CDS 3420550 3420711 . - 0 Parent=GSCOCT00034934001 | |
| 37163 chr10 manual_curation CDS 3419185 3419663 . - 0 Parent=GSCOCT00034934001 | |
| 37164 chr10 manual_curation CDS 3418811 3418901 . - 2 Parent=GSCOCT00034934001 | |
| 37165 chr10 manual_curation gene 3429974 3432454 . - . ID=GSCOCG00034932001;Name=Cc10_g04450 | |
| 37166 chr10 manual_curation mRNA 3429974 3432454 . - . ID=GSCOCT00034932001;Parent=GSCOCG00034932001;Name=Cc10_g04450 | |
| 37167 chr10 manual_curation polypeptide 3429974 3432454 . - . ID=GSCOCP00034932001;Dbxref=InterPro:IPR002641,InterPro:IPR016035,PFAM:PF01734,SUPERFAMILY:SSF52151,SwissProt:Q2MY58,SwissProt:Q3YJT3,SwissProt:Q42502,TAIR:AT2G26560.1,TAIR:AT4G37050.1,TAIR:AT4G37070.2,TrEMBL:B9R7G5,TrEMBL:E0CP92,TrEMBL:F6H017;Derives_from=GSCOCT00034932001;Name=Cc10_g04450;Ontology_term=CC_evidence_code:ISS,GO:0006629,GO:0008152,CC_EC_number:missing_EC_number,PRODUCT:Putative Patatin group A-3,CC_functional_completeness:complete,CC_gene:pat2-k1,CC_gene:pat2-k3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034932001~ Putative Patatin group A-3~ pat2-k1~ complete;original_location=join(5628748..5628888%2C5629006..5629187%2C5629582..5629771%2C5629889..5630050%2C5630452..5630754%2C5630877..5631052%2C5631162..5631228);owner=coffea | |
| 37168 chr10 manual_curation exon 3432314 3432454 . - . Parent=GSCOCT00034932001 | |
| 37169 chr10 manual_curation exon 3432015 3432196 . - . Parent=GSCOCT00034932001 | |
| 37170 chr10 manual_curation exon 3431431 3431620 . - . Parent=GSCOCT00034932001 | |
| 37171 chr10 manual_curation exon 3431152 3431313 . - . Parent=GSCOCT00034932001 | |
| 37172 chr10 manual_curation exon 3430448 3430750 . - . Parent=GSCOCT00034932001 | |
| 37173 chr10 manual_curation exon 3430150 3430325 . - . Parent=GSCOCT00034932001 | |
| 37174 chr10 manual_curation exon 3429974 3430040 . - . Parent=GSCOCT00034932001 | |
| 37175 chr10 manual_curation CDS 3432314 3432454 . - 0 Parent=GSCOCT00034932001 | |
| 37176 chr10 manual_curation CDS 3432015 3432196 . - 0 Parent=GSCOCT00034932001 | |
| 37177 chr10 manual_curation CDS 3431431 3431620 . - 2 Parent=GSCOCT00034932001 | |
| 37178 chr10 manual_curation CDS 3431152 3431313 . - 0 Parent=GSCOCT00034932001 | |
| 37179 chr10 manual_curation CDS 3430448 3430750 . - 0 Parent=GSCOCT00034932001 | |
| 37180 chr10 manual_curation CDS 3430150 3430325 . - 0 Parent=GSCOCT00034932001 | |
| 37181 chr10 manual_curation CDS 3429974 3430040 . - 2 Parent=GSCOCT00034932001 | |
| 37182 chr10 manual_curation gene 3435728 3443722 . + . ID=GSCOCG00034931001;Name=Cc10_g04460 | |
| 37183 chr10 manual_curation mRNA 3435728 3443722 . + . ID=GSCOCT00034931001;Parent=GSCOCG00034931001;Name=Cc10_g04460 | |
| 37184 chr10 manual_curation polypeptide 3435728 3443163 . + . ID=GSCOCP00034931001;Dbxref=InterPro:IPR016024,SUPERFAMILY:SSF48371,SwissProt:Q2TBM9,SwissProt:Q3U213,SwissProt:Q96JX3,TAIR:AT4G34310.1,TrEMBL:B9R7G8,TrEMBL:F6H018,TrEMBL:I1M8K1;Derives_from=GSCOCT00034931001;Name=Cc10_g04460;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:alpha/beta-Hydrolases superfamily protein,CC_functional_completeness:complete,CC_gene:SERAC1,CC_gene:Serac1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034931001~ alpha/beta-Hydrolases superfamily protein~ SERAC1~ complete;original_location=complement(join(5624728..5625474%2C5622748..5623905%2C5621484..5622614%2C5621126..5621167%2C5620465..5620541%2C5619548..5619632%2C5619371..5619454%2C5619133..5619234%2C5618932..5619030%2C5618039..5618152));owner=coffea | |
| 37185 chr10 manual_curation exon 3443050 3443722 . + . Parent=GSCOCT00034931001 | |
| 37186 chr10 manual_curation exon 3442172 3442270 . + . Parent=GSCOCT00034931001 | |
| 37187 chr10 manual_curation exon 3441968 3442069 . + . Parent=GSCOCT00034931001 | |
| 37188 chr10 manual_curation exon 3441748 3441831 . + . Parent=GSCOCT00034931001 | |
| 37189 chr10 manual_curation exon 3441570 3441654 . + . Parent=GSCOCT00034931001 | |
| 37190 chr10 manual_curation exon 3440661 3440737 . + . Parent=GSCOCT00034931001 | |
| 37191 chr10 manual_curation exon 3440035 3440076 . + . Parent=GSCOCT00034931001 | |
| 37192 chr10 manual_curation exon 3438588 3439718 . + . Parent=GSCOCT00034931001 | |
| 37193 chr10 manual_curation exon 3437297 3438454 . + . Parent=GSCOCT00034931001 | |
| 37194 chr10 manual_curation exon 3435728 3436474 . + . Parent=GSCOCT00034931001 | |
| 37195 chr10 manual_curation CDS 3443050 3443163 . + 0 Parent=GSCOCT00034931001 | |
| 37196 chr10 manual_curation CDS 3442172 3442270 . + 0 Parent=GSCOCT00034931001 | |
| 37197 chr10 manual_curation CDS 3441968 3442069 . + 0 Parent=GSCOCT00034931001 | |
| 37198 chr10 manual_curation CDS 3441748 3441831 . + 0 Parent=GSCOCT00034931001 | |
| 37199 chr10 manual_curation CDS 3441570 3441654 . + 2 Parent=GSCOCT00034931001 | |
| 37200 chr10 manual_curation CDS 3440661 3440737 . + 0 Parent=GSCOCT00034931001 | |
| 37201 chr10 manual_curation CDS 3440035 3440076 . + 0 Parent=GSCOCT00034931001 | |
| 37202 chr10 manual_curation CDS 3438588 3439718 . + 0 Parent=GSCOCT00034931001 | |
| 37203 chr10 manual_curation CDS 3437297 3438454 . + 0 Parent=GSCOCT00034931001 | |
| 37204 chr10 manual_curation CDS 3435728 3436474 . + 0 Parent=GSCOCT00034931001 | |
| 37205 chr10 manual_curation gene 3444599 3448018 . + . ID=GSCOCG00034930001;Name=Cc10_g04470 | |
| 37206 chr10 manual_curation mRNA 3444599 3448018 . + . ID=GSCOCT00034930001;Parent=GSCOCG00034930001;Name=Cc10_g04470 | |
| 37207 chr10 manual_curation polypeptide 3444753 3447443 . + . ID=GSCOCP00034930001;Dbxref=GENE3D:G3DSA:1.20.910.10,InterPro:IPR002051,InterPro:IPR016053,InterPro:IPR016084,PANTHER:PTHR10720,PFAM:PF01126,SUPERFAMILY:SSF48613,SwissProt:O48722,SwissProt:O48782,SwissProt:Q10K62,TAIR:AT1G69720.1,TAIR:AT2G26550.1,TAIR:AT2G26670.1,TrEMBL:B9MVL3,TrEMBL:E0CPA6,TrEMBL:Q94FW6;Derives_from=GSCOCT00034930001;Name=Cc10_g04470;Ontology_term=CC_evidence_code:ISS,GO:0004392,GO:0006788,GO:0055114,CC_EC_number:1.14.99.3,PRODUCT:Probable inactive heme oxygenase 2%2C chloroplastic,CC_functional_completeness:modules,CC_gene:HO2,CC_gene:HO1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034930001~ Probable inactive heme oxygenase 2%2C chloroplastic~ HO2~ modules;original_location=complement(join(5615828..5616449%2C5615077..5615300%2C5613953..5614060%2C5613759..5613866));owner=coffea | |
| 37208 chr10 manual_curation exon 3447336 3448018 . + . Parent=GSCOCT00034930001 | |
| 37209 chr10 manual_curation exon 3447142 3447249 . + . Parent=GSCOCT00034930001 | |
| 37210 chr10 manual_curation exon 3445902 3446125 . + . Parent=GSCOCT00034930001 | |
| 37211 chr10 manual_curation exon 3444599 3445374 . + . Parent=GSCOCT00034930001 | |
| 37212 chr10 manual_curation CDS 3447336 3447443 . + 0 Parent=GSCOCT00034930001 | |
| 37213 chr10 manual_curation CDS 3447142 3447249 . + 0 Parent=GSCOCT00034930001 | |
| 37214 chr10 manual_curation CDS 3445902 3446125 . + 1 Parent=GSCOCT00034930001 | |
| 37215 chr10 manual_curation CDS 3444753 3445374 . + 0 Parent=GSCOCT00034930001 | |
| 37216 chr10 manual_curation gene 3451602 3452473 . + . ID=GSCOCG00034929001;Name=Cc10_g04480 | |
| 37217 chr10 manual_curation mRNA 3451602 3452473 . + . ID=GSCOCT00034929001;Parent=GSCOCG00034929001;Name=Cc10_g04480 | |
| 37218 chr10 manual_curation polypeptide 3451902 3452473 . + . ID=GSCOCP00034929001;Derives_from=GSCOCT00034929001;Name=Cc10_g04480;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034929001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(5609197..5609300%2C5608995..5609043%2C5608729..5608815));owner=coffea | |
| 37219 chr10 manual_curation exon 3452387 3452473 . + . Parent=GSCOCT00034929001 | |
| 37220 chr10 manual_curation exon 3452159 3452207 . + . Parent=GSCOCT00034929001 | |
| 37221 chr10 manual_curation exon 3451602 3452005 . + . Parent=GSCOCT00034929001 | |
| 37222 chr10 manual_curation CDS 3452387 3452473 . + 0 Parent=GSCOCT00034929001 | |
| 37223 chr10 manual_curation CDS 3452159 3452207 . + 2 Parent=GSCOCT00034929001 | |
| 37224 chr10 manual_curation CDS 3451902 3452005 . + 0 Parent=GSCOCT00034929001 | |
| 37225 chr10 manual_curation gene 3452629 3457194 . + . ID=GSCOCG00034928001;Name=Cc10_g04490 | |
| 37226 chr10 manual_curation mRNA 3452629 3457194 . + . ID=GSCOCT00034928001;Parent=GSCOCG00034928001;Name=Cc10_g04490 | |
| 37227 chr10 manual_curation polypeptide 3452629 3456922 . + . ID=GSCOCP00034928001;Dbxref=InterPro:IPR001202,InterPro:IPR019012,PFAM:PF00397,PFAM:PF09445,PROFILE:PS50020,SMART:SM00456,SwissProt:P85107,SwissProt:Q923W1,SwissProt:Q96RS0,TAIR:AT1G30550.1,TAIR:AT1G45231.2,TrEMBL:F2D755,TrEMBL:F6H1C9,TrEMBL:I1PC13;Derives_from=GSCOCT00034928001;Name=Cc10_g04490;Ontology_term=CC_evidence_code:ISS,GO:0001510,GO:0005515,GO:0008168,GO:0009452,CC_EC_number:missing_EC_number,PRODUCT:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein,CC_functional_completeness:modules,CC_gene:Tgs1,CC_gene:TGS1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034928001~ S-adenosyl-L-methionine-dependent methyltransferases superfamily protein~ Tgs1~ modules;original_location=complement(join(5608478..5608573%2C5606979..5608008%2C5606305..5606536%2C5605658..5605793%2C5605159..5605253%2C5604930..5605053%2C5604280..5604348));owner=coffea | |
| 37228 chr10 manual_curation exon 3456854 3457194 . + . Parent=GSCOCT00034928001 | |
| 37229 chr10 manual_curation exon 3456149 3456272 . + . Parent=GSCOCT00034928001 | |
| 37230 chr10 manual_curation exon 3455949 3456043 . + . Parent=GSCOCT00034928001 | |
| 37231 chr10 manual_curation exon 3455409 3455544 . + . Parent=GSCOCT00034928001 | |
| 37232 chr10 manual_curation exon 3454666 3454897 . + . Parent=GSCOCT00034928001 | |
| 37233 chr10 manual_curation exon 3453194 3454223 . + . Parent=GSCOCT00034928001 | |
| 37234 chr10 manual_curation exon 3452629 3452724 . + . Parent=GSCOCT00034928001 | |
| 37235 chr10 manual_curation CDS 3456854 3456922 . + 0 Parent=GSCOCT00034928001 | |
| 37236 chr10 manual_curation CDS 3456149 3456272 . + 2 Parent=GSCOCT00034928001 | |
| 37237 chr10 manual_curation CDS 3455949 3456043 . + 0 Parent=GSCOCT00034928001 | |
| 37238 chr10 manual_curation CDS 3455409 3455544 . + 2 Parent=GSCOCT00034928001 | |
| 37239 chr10 manual_curation CDS 3454666 3454897 . + 1 Parent=GSCOCT00034928001 | |
| 37240 chr10 manual_curation CDS 3453194 3454223 . + 0 Parent=GSCOCT00034928001 | |
| 37241 chr10 manual_curation CDS 3452629 3452724 . + 0 Parent=GSCOCT00034928001 | |
| 37242 chr10 manual_curation gene 3460820 3465593 . + . ID=GSCOCG00034926001;Name=Cc10_g04500 | |
| 37243 chr10 manual_curation mRNA 3460820 3465593 . + . ID=GSCOCT00034926001;Parent=GSCOCG00034926001;Name=Cc10_g04500 | |
| 37244 chr10 manual_curation polypeptide 3461008 3464671 . + . ID=GSCOCP00034926001;Dbxref=InterPro:IPR005516,PFAM:PF03763,TAIR:AT1G45207.2,TAIR:AT2G02170.1,TAIR:AT4G36970.1,TrEMBL:B9GNV3,TrEMBL:B9R7B1,TrEMBL:E0CPU6;Derives_from=GSCOCT00034926001;Name=Cc10_g04500;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Remorin family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034926001~ Putative Remorin family protein~ unknown_gene~ complete;original_location=complement(join(5600000..5600194%2C5599646..5599778%2C5599397..5599486%2C5598623..5599306%2C5597787..5598159%2C5596988..5597069%2C5596531..5596737));owner=coffea | |
| 37245 chr10 manual_curation exon 3464465 3465593 . + . Parent=GSCOCT00034926001 | |
| 37246 chr10 manual_curation exon 3464133 3464214 . + . Parent=GSCOCT00034926001 | |
| 37247 chr10 manual_curation exon 3463043 3463415 . + . Parent=GSCOCT00034926001 | |
| 37248 chr10 manual_curation exon 3461896 3462579 . + . Parent=GSCOCT00034926001 | |
| 37249 chr10 manual_curation exon 3461716 3461805 . + . Parent=GSCOCT00034926001 | |
| 37250 chr10 manual_curation exon 3461424 3461556 . + . Parent=GSCOCT00034926001 | |
| 37251 chr10 manual_curation exon 3460820 3461202 . + . Parent=GSCOCT00034926001 | |
| 37252 chr10 manual_curation CDS 3464465 3464671 . + 0 Parent=GSCOCT00034926001 | |
| 37253 chr10 manual_curation CDS 3464133 3464214 . + 2 Parent=GSCOCT00034926001 | |
| 37254 chr10 manual_curation CDS 3463043 3463415 . + 1 Parent=GSCOCT00034926001 | |
| 37255 chr10 manual_curation CDS 3461896 3462579 . + 1 Parent=GSCOCT00034926001 | |
| 37256 chr10 manual_curation CDS 3461716 3461805 . + 1 Parent=GSCOCT00034926001 | |
| 37257 chr10 manual_curation CDS 3461424 3461556 . + 0 Parent=GSCOCT00034926001 | |
| 37258 chr10 manual_curation CDS 3461008 3461202 . + 0 Parent=GSCOCT00034926001 | |
| 37259 chr10 manual_curation gene 3465859 3469178 . - . ID=GSCOCG00034925001;Name=Cc10_g04510 | |
| 37260 chr10 manual_curation mRNA 3465859 3469178 . - . ID=GSCOCT00034925001;Parent=GSCOCG00034925001;Name=Cc10_g04510 | |
| 37261 chr10 manual_curation polypeptide 3466107 3469045 . - . ID=GSCOCP00034925001;Dbxref=InterPro:IPR002921,PFAM:PF01764,TAIR:AT1G45201.1,TAIR:AT1G56630.1,TAIR:AT5G42930.1,TrEMBL:B9MVS3,TrEMBL:B9R7B0,TrEMBL:F6H1C8;Derives_from=GSCOCT00034925001;Name=Cc10_g04510;Ontology_term=CC_evidence_code:ISS,GO:0004806,GO:0006629,CC_EC_number:missing_EC_number,PRODUCT:alpha/beta-Hydrolases superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034925001~ alpha/beta-Hydrolases superfamily protein~ unknown_gene~ complete;original_location=join(5592157..5592490%2C5592766..5592959%2C5593072..5593105%2C5594081..5594700%2C5594823..5595095);owner=coffea | |
| 37262 chr10 manual_curation exon 3468712 3469178 . - . Parent=GSCOCT00034925001 | |
| 37263 chr10 manual_curation exon 3468243 3468436 . - . Parent=GSCOCT00034925001 | |
| 37264 chr10 manual_curation exon 3468097 3468130 . - . Parent=GSCOCT00034925001 | |
| 37265 chr10 manual_curation exon 3466502 3467121 . - . Parent=GSCOCT00034925001 | |
| 37266 chr10 manual_curation exon 3465859 3466379 . - . Parent=GSCOCT00034925001 | |
| 37267 chr10 manual_curation CDS 3468712 3469045 . - 0 Parent=GSCOCT00034925001 | |
| 37268 chr10 manual_curation CDS 3468243 3468436 . - 1 Parent=GSCOCT00034925001 | |
| 37269 chr10 manual_curation CDS 3468097 3468130 . - 0 Parent=GSCOCT00034925001 | |
| 37270 chr10 manual_curation CDS 3466502 3467121 . - 1 Parent=GSCOCT00034925001 | |
| 37271 chr10 manual_curation CDS 3466107 3466379 . - 0 Parent=GSCOCT00034925001 | |
| 37272 chr10 manual_curation gene 3529069 3534350 . - . ID=GSCOCG00034924001;Name=Cc10_g04520 | |
| 37273 chr10 manual_curation mRNA 3529069 3534350 . - . ID=GSCOCT00034924001;Parent=GSCOCG00034924001;Name=Cc10_g04520 | |
| 37274 chr10 manual_curation polypeptide 3529517 3534180 . - . ID=GSCOCP00034924001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019775,InterPro:IPR019781,InterPro:IPR019782,InterPro:IPR020472,PFAM:PF00400,PRINTS:PR00320,PROFILE:PS50082,PROFILE:PS50294,PROSITE:PS00678,SMART:SM00320,SUPERFAMILY:SSF50978,SwissProt:Q3SZD4,SwissProt:Q499N3,SwissProt:Q68EI0,TAIR:AT1G04510.1,TAIR:AT1G18080.1,TAIR:AT3G49180.1,TrEMBL:B9MVS5,TrEMBL:B9R7A8,TrEMBL:E0CPU3;Derives_from=GSCOCT00034924001;Name=Cc10_g04520;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative WD repeat-containing protein 18,CC_functional_completeness:complete,CC_gene:WDR18,CC_gene:wdr18,CC_gene:Wdr18;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034924001~ Putative WD repeat-containing protein 18~ WDR18~ complete;original_location=join(5527022..5527231%2C5527432..5527545%2C5527633..5527766%2C5527855..5528002%2C5528555..5528754%2C5529424..5529551%2C5530194..5530435%2C5531509..5531685);owner=coffea | |
| 37275 chr10 manual_curation exon 3533971 3534350 . - . Parent=GSCOCT00034924001 | |
| 37276 chr10 manual_curation exon 3533657 3533770 . - . Parent=GSCOCT00034924001 | |
| 37277 chr10 manual_curation exon 3533436 3533569 . - . Parent=GSCOCT00034924001 | |
| 37278 chr10 manual_curation exon 3533200 3533347 . - . Parent=GSCOCT00034924001 | |
| 37279 chr10 manual_curation exon 3532448 3532647 . - . Parent=GSCOCT00034924001 | |
| 37280 chr10 manual_curation exon 3531651 3531778 . - . Parent=GSCOCT00034924001 | |
| 37281 chr10 manual_curation exon 3530767 3531008 . - . Parent=GSCOCT00034924001 | |
| 37282 chr10 manual_curation exon 3529069 3529693 . - . Parent=GSCOCT00034924001 | |
| 37283 chr10 manual_curation CDS 3533971 3534180 . - 0 Parent=GSCOCT00034924001 | |
| 37284 chr10 manual_curation CDS 3533657 3533770 . - 0 Parent=GSCOCT00034924001 | |
| 37285 chr10 manual_curation CDS 3533436 3533569 . - 0 Parent=GSCOCT00034924001 | |
| 37286 chr10 manual_curation CDS 3533200 3533347 . - 2 Parent=GSCOCT00034924001 | |
| 37287 chr10 manual_curation CDS 3532448 3532647 . - 0 Parent=GSCOCT00034924001 | |
| 37288 chr10 manual_curation CDS 3531651 3531778 . - 2 Parent=GSCOCT00034924001 | |
| 37289 chr10 manual_curation CDS 3530767 3531008 . - 1 Parent=GSCOCT00034924001 | |
| 37290 chr10 manual_curation CDS 3529517 3529693 . - 0 Parent=GSCOCT00034924001 | |
| 37291 chr10 manual_curation gene 3538311 3540148 . - . ID=GSCOCG00034923001;Name=Cc10_g04530 | |
| 37292 chr10 manual_curation mRNA 3538311 3540148 . - . ID=GSCOCT00034923001;Parent=GSCOCG00034923001;Name=Cc10_g04530 | |
| 37293 chr10 manual_curation polypeptide 3538657 3539905 . - . ID=GSCOCP00034923001;Dbxref=GENE3D:G3DSA:1.10.10.10,InterPro:IPR000232,InterPro:IPR011991,PFAM:PF00447,PRINTS:PR00056,PROSITE:PS00434,SMART:SM00415,SwissProt:Q10KX8,SwissProt:Q7XHZ0,SwissProt:Q9C635,TAIR:AT1G46264.1,TAIR:AT4G11660.1,TAIR:AT4G36990.1,TrEMBL:A5APA7,TrEMBL:B9R7A7,TrEMBL:G7J6F2;Derives_from=GSCOCT00034923001;Name=Cc10_g04530;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0005634,GO:0043565,CC_EC_number:missing_EC_number,PRODUCT:Heat stress transcription factor B-4,CC_functional_completeness:complete,CC_gene:HSFB4,CC_gene:HSFB4B,CC_gene:HSFB4D;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034923001~ Heat stress transcription factor B-4~ HSFB4~ complete;original_location=join(5521297..5521545%2C5521661..5521839%2C5521984..5522282%2C5522373..5522545);owner=coffea | |
| 37294 chr10 manual_curation exon 3539657 3540148 . - . Parent=GSCOCT00034923001 | |
| 37295 chr10 manual_curation exon 3539363 3539541 . - . Parent=GSCOCT00034923001 | |
| 37296 chr10 manual_curation exon 3538920 3539218 . - . Parent=GSCOCT00034923001 | |
| 37297 chr10 manual_curation exon 3538311 3538829 . - . Parent=GSCOCT00034923001 | |
| 37298 chr10 manual_curation CDS 3539657 3539905 . - 0 Parent=GSCOCT00034923001 | |
| 37299 chr10 manual_curation CDS 3539363 3539541 . - 0 Parent=GSCOCT00034923001 | |
| 37300 chr10 manual_curation CDS 3538920 3539218 . - 2 Parent=GSCOCT00034923001 | |
| 37301 chr10 manual_curation CDS 3538657 3538829 . - 1 Parent=GSCOCT00034923001 | |
| 37302 chr10 manual_curation gene 3556830 3559237 . - . ID=GSCOCG00034922001;Name=Cc10_g04540 | |
| 37303 chr10 manual_curation mRNA 3556830 3559237 . - . ID=GSCOCT00034922001;Parent=GSCOCG00034922001;Name=Cc10_g04540 | |
| 37304 chr10 manual_curation polypeptide 3556952 3559136 . - . ID=GSCOCP00034922001;Dbxref=InterPro:IPR001841,InterPro:IPR017066,PIR:PIRSF036836,PROFILE:PS50089,TAIR:AT1G10650.1,TAIR:AT1G45976.1,TAIR:AT1G60610.1,TrEMBL:A0ELV3,TrEMBL:B2Z3P8,TrEMBL:Q2VY15;Derives_from=GSCOCT00034922001;Name=Cc10_g04540;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:S-ribonuclease binding protein 1,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034922001~ S-ribonuclease binding protein 1~ unknown_gene~ complete;original_location=join(5502066..5502145%2C5502226..5502332%2C5502444..5502802%2C5503723..5504250);owner=coffea | |
| 37305 chr10 manual_curation exon 3559057 3559237 . - . Parent=GSCOCT00034922001 | |
| 37306 chr10 manual_curation exon 3558870 3558976 . - . Parent=GSCOCT00034922001 | |
| 37307 chr10 manual_curation exon 3558400 3558758 . - . Parent=GSCOCT00034922001 | |
| 37308 chr10 manual_curation exon 3556830 3557479 . - . Parent=GSCOCT00034922001 | |
| 37309 chr10 manual_curation CDS 3559057 3559136 . - 0 Parent=GSCOCT00034922001 | |
| 37310 chr10 manual_curation CDS 3558870 3558976 . - 2 Parent=GSCOCT00034922001 | |
| 37311 chr10 manual_curation CDS 3558400 3558758 . - 1 Parent=GSCOCT00034922001 | |
| 37312 chr10 manual_curation CDS 3556952 3557479 . - 0 Parent=GSCOCT00034922001 | |
| 37313 chr10 manual_curation gene 3562315 3562749 . + . ID=GSCOCG00034921001;Name=Cc10_g04550 | |
| 37314 chr10 manual_curation mRNA 3562315 3562749 . + . ID=GSCOCT00034921001;Parent=GSCOCG00034921001;Name=Cc10_g04550 | |
| 37315 chr10 manual_curation polypeptide 3562315 3562749 . + . ID=GSCOCP00034921001;Dbxref=InterPro:IPR008801,PFAM:PF05498,TAIR:AT5G67070.1,TrEMBL:A9PAC7,TrEMBL:B9SC80,TrEMBL:D7SVW8;Derives_from=GSCOCT00034921001;Name=Cc10_g04550;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034921001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=complement(5498453..5498887);owner=coffea | |
| 37316 chr10 manual_curation exon 3562315 3562749 . + . Parent=GSCOCT00034921001 | |
| 37317 chr10 manual_curation CDS 3562315 3562749 . + 0 Parent=GSCOCT00034921001 | |
| 37318 chr10 manual_curation gene 3564685 3567057 . - . ID=GSCOCG00034920001;Name=Cc10_g04560 | |
| 37319 chr10 manual_curation mRNA 3564685 3567057 . - . ID=GSCOCT00034920001;Parent=GSCOCG00034920001;Name=Cc10_g04560 | |
| 37320 chr10 manual_curation polypeptide 3565173 3566683 . - . ID=GSCOCP00034920001;Dbxref=InterPro:IPR004864,PFAM:PF03168,TAIR:AT1G45688.1,TAIR:AT4G35170.1,TAIR:AT5G42860.1,TrEMBL:B9GNU7,TrEMBL:B9R7A4,TrEMBL:F6H1C5;Derives_from=GSCOCT00034920001;Name=Cc10_g04560;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034920001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42860.1)%3B Has 258 Blast hits to 242 proteins in 39 species: Archae - 0%3B Bacteria - 11%3B Metazoa - 10%3B Fungi - 14%3B Plants - 198%3B Viruses - 17%3B Other Eukaryotes - 8 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(5494519..5495016%2C5495421..5495606%2C5495742..5496029);owner=coffea | |
| 37321 chr10 manual_curation exon 3566186 3567057 . - . Parent=GSCOCT00034920001 | |
| 37322 chr10 manual_curation exon 3565596 3565781 . - . Parent=GSCOCT00034920001 | |
| 37323 chr10 manual_curation exon 3564685 3565460 . - . Parent=GSCOCT00034920001 | |
| 37324 chr10 manual_curation CDS 3566186 3566683 . - 0 Parent=GSCOCT00034920001 | |
| 37325 chr10 manual_curation CDS 3565596 3565781 . - 0 Parent=GSCOCT00034920001 | |
| 37326 chr10 manual_curation CDS 3565173 3565460 . - 0 Parent=GSCOCT00034920001 | |
| 37327 chr10 manual_curation gene 3572796 3574229 . - . ID=GSCOCG00034919001;Name=Cc10_g04570 | |
| 37328 chr10 manual_curation mRNA 3572796 3574229 . - . ID=GSCOCT00034919001;Parent=GSCOCG00034919001;Name=Cc10_g04570 | |
| 37329 chr10 manual_curation polypeptide 3572796 3574229 . - . ID=GSCOCP00034919001;Dbxref=InterPro:IPR013094,PFAM:PF07859,SwissProt:Q9LMA7,SwissProt:Q9SMN0,SwissProt:Q9ZQ91,TAIR:AT1G19190.1,TAIR:AT2G03550.1,TAIR:AT3G48690.1,TrEMBL:B9P4U2,TrEMBL:B9RY25,TrEMBL:G7JMF3;Derives_from=GSCOCT00034919001;Name=Cc10_g04570;Ontology_term=CC_evidence_code:ISS,GO:0008152,GO:0016787,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable carboxylesterase 12,CC_functional_completeness:complete,CC_gene:CXE12,CC_gene:CXE1,CC_gene:CXE7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034919001~ Putative Probable carboxylesterase 12~ CXE12~ complete;original_location=join(5486973..5487103%2C5487168..5487331%2C5487408..5487506%2C5488058..5488186%2C5488228..5488406);owner=coffea | |
| 37330 chr10 manual_curation exon 3574099 3574229 . - . Parent=GSCOCT00034919001 | |
| 37331 chr10 manual_curation exon 3573871 3574034 . - . Parent=GSCOCT00034919001 | |
| 37332 chr10 manual_curation exon 3573696 3573794 . - . Parent=GSCOCT00034919001 | |
| 37333 chr10 manual_curation exon 3573016 3573144 . - . Parent=GSCOCT00034919001 | |
| 37334 chr10 manual_curation exon 3572796 3572974 . - . Parent=GSCOCT00034919001 | |
| 37335 chr10 manual_curation CDS 3574099 3574229 . - 0 Parent=GSCOCT00034919001 | |
| 37336 chr10 manual_curation CDS 3573871 3574034 . - 2 Parent=GSCOCT00034919001 | |
| 37337 chr10 manual_curation CDS 3573696 3573794 . - 1 Parent=GSCOCT00034919001 | |
| 37338 chr10 manual_curation CDS 3573016 3573144 . - 1 Parent=GSCOCT00034919001 | |
| 37339 chr10 manual_curation CDS 3572796 3572974 . - 1 Parent=GSCOCT00034919001 | |
| 37340 chr10 manual_curation gene 3577398 3579707 . + . ID=GSCOCG00034918001;Name=Cc10_g04580 | |
| 37341 chr10 manual_curation mRNA 3577398 3579707 . + . ID=GSCOCT00034918001;Parent=GSCOCG00034918001;Name=Cc10_g04580 | |
| 37342 chr10 manual_curation polypeptide 3577398 3579707 . + . ID=GSCOCP00034918001;Dbxref=GENE3D:G3DSA:3.40.50.200,InterPro:IPR000209,InterPro:IPR010259,InterPro:IPR015500,InterPro:IPR022398,PANTHER:PTHR10795,PFAM:PF00082,PFAM:PF05922,PRINTS:PR00723,PROSITE:PS00138,SUPERFAMILY:SSF52743,SwissProt:O64495,SwissProt:O65351,SwissProt:Q39547,TAIR:AT4G34980.1,TAIR:AT5G67090.1,TAIR:AT5G67360.1,TrEMBL:A5B093,TrEMBL:F6H1C2,TrEMBL:F6H1C3;Derives_from=GSCOCT00034918001;Name=Cc10_g04580;Ontology_term=CC_evidence_code:ISS,GO:0004252,GO:0006508,GO:0042802,GO:0043086,CC_EC_number:3.4.21.25,PRODUCT:Putative Subtilisin-like protease,CC_functional_completeness:complete,CC_gene:ARA12,CC_gene:SDD1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034918001~ Putative Subtilisin-like protease~ ARA12~ complete;original_location=complement(5481495..5483804);owner=coffea | |
| 37343 chr10 manual_curation exon 3577398 3579707 . + . Parent=GSCOCT00034918001 | |
| 37344 chr10 manual_curation CDS 3577398 3579707 . + 0 Parent=GSCOCT00034918001 | |
| 37345 chr10 manual_curation gene 3586518 3589180 . - . ID=GSCOCG00034917001;Name=Cc10_g04590 | |
| 37346 chr10 manual_curation mRNA 3586518 3589180 . - . ID=GSCOCT00034917001;Parent=GSCOCG00034917001;Name=Cc10_g04590 | |
| 37347 chr10 manual_curation polypeptide 3586792 3588252 . - . ID=GSCOCP00034917001;Dbxref=GENE3D:G3DSA:3.40.50.200,InterPro:IPR000209,InterPro:IPR015500,InterPro:IPR022398,PANTHER:PTHR10795,PFAM:PF00082,PROSITE:PS00138,SUPERFAMILY:SSF52743,SwissProt:O64495,SwissProt:O65351,SwissProt:Q39547,TAIR:AT2G05920.1,TAIR:AT3G14240.1,TAIR:AT4G34980.1,TrEMBL:A5B093,TrEMBL:F6H1C2,TrEMBL:F6H1C3;Derives_from=GSCOCT00034917001;Name=Cc10_g04590;Ontology_term=CC_evidence_code:ISS,GO:0004252,GO:0006508,CC_EC_number:3.4.21.25,PRODUCT:Putative Subtilisin-like protease,CC_functional_completeness:fragment,CC_gene:ARA12,CC_gene:SDD1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034917001~ Putative Subtilisin-like protease~ ARA12~ fragment;original_location=5472950..5474410;owner=coffea | |
| 37348 chr10 manual_curation exon 3586518 3589180 . - . Parent=GSCOCT00034917001 | |
| 37349 chr10 manual_curation CDS 3586792 3588252 . - 0 Parent=GSCOCT00034917001 | |
| 37350 chr10 manual_curation gene 3593095 3595810 . - . ID=GSCOCG00034916001;Name=Cc10_g04600 | |
| 37351 chr10 manual_curation mRNA 3593095 3595810 . - . ID=GSCOCT00034916001;Parent=GSCOCG00034916001;Name=Cc10_g04600 | |
| 37352 chr10 manual_curation polypeptide 3593531 3595810 . - . ID=GSCOCP00034916001;Dbxref=GENE3D:G3DSA:3.40.50.200,InterPro:IPR000209,InterPro:IPR009020,InterPro:IPR010259,InterPro:IPR022398,PFAM:PF00082,PFAM:PF05922,PRINTS:PR00723,PROSITE:PS00138,SUPERFAMILY:SSF52743,SUPERFAMILY:SSF54897,SwissProt:O64495,SwissProt:O65351,SwissProt:Q39547,TAIR:AT3G14240.1,TAIR:AT5G67090.1,TAIR:AT5G67360.1,TrEMBL:A5B093,TrEMBL:F6H1C2,TrEMBL:F6H1C3;Derives_from=GSCOCT00034916001;Name=Cc10_g04600;Ontology_term=CC_evidence_code:ISS,GO:0004252,GO:0006508,GO:0042802,GO:0043086,CC_EC_number:3.4.21.25,PRODUCT:Putative Subtilisin-like protease,CC_functional_completeness:complete,CC_gene:ARA12,CC_gene:SDD1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034916001~ Putative Subtilisin-like protease~ ARA12~ complete;original_location=5465392..5467671;owner=coffea | |
| 37353 chr10 manual_curation exon 3593095 3595810 . - . Parent=GSCOCT00034916001 | |
| 37354 chr10 manual_curation CDS 3593531 3595810 . - 0 Parent=GSCOCT00034916001 | |
| 37355 chr10 manual_curation gene 3598440 3600999 . - . ID=GSCOCG00034915001;Name=Cc10_g04610 | |
| 37356 chr10 manual_curation mRNA 3598440 3600999 . - . ID=GSCOCT00034915001;Parent=GSCOCG00034915001;Name=Cc10_g04610 | |
| 37357 chr10 manual_curation polypeptide 3598705 3600999 . - . ID=GSCOCP00034915001;Dbxref=GENE3D:G3DSA:3.40.50.200,InterPro:IPR000209,InterPro:IPR003137,InterPro:IPR009020,InterPro:IPR010259,InterPro:IPR015500,InterPro:IPR022398,PANTHER:PTHR10795,PFAM:PF00082,PFAM:PF02225,PFAM:PF05922,PRINTS:PR00723,PROSITE:PS00136,PROSITE:PS00137,PROSITE:PS00138,SUPERFAMILY:SSF52743,SUPERFAMILY:SSF54897,SwissProt:O64495,SwissProt:O65351,SwissProt:Q39547,TAIR:AT3G14240.1,TAIR:AT5G67090.1,TAIR:AT5G67360.1,TrEMBL:A5B093,TrEMBL:D2CNC6,TrEMBL:F6H1C2;Derives_from=GSCOCT00034915001;Name=Cc10_g04610;Ontology_term=CC_evidence_code:ISS,GO:0004252,GO:0006508,GO:0042802,GO:0043086,CC_EC_number:3.4.21.25,PRODUCT:Putative Subtilisin-like protease,CC_functional_completeness:complete,CC_gene:ARA12,CC_gene:SDD1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034915001~ Putative Subtilisin-like protease~ ARA12~ complete;original_location=5460203..5462497;owner=coffea | |
| 37358 chr10 manual_curation exon 3598440 3600999 . - . Parent=GSCOCT00034915001 | |
| 37359 chr10 manual_curation CDS 3598705 3600999 . - 0 Parent=GSCOCT00034915001 | |
| 37360 chr10 manual_curation gene 3605499 3609865 . - . ID=GSCOCG00034914001;Name=Cc10_g04620 | |
| 37361 chr10 manual_curation mRNA 3605499 3609865 . - . ID=GSCOCT00034914001;Parent=GSCOCG00034914001;Name=Cc10_g04620 | |
| 37362 chr10 manual_curation polypeptide 3606475 3609519 . - . ID=GSCOCP00034914001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q3EDL4,SwissProt:Q6NKZ9,SwissProt:Q9SJG2,TAIR:AT1G01540.2,TAIR:AT4G01330.2,TAIR:AT4G02630.1,TrEMBL:B9R799,TrEMBL:F6H1C1,TrEMBL:F6H4J8;Derives_from=GSCOCT00034914001;Name=Cc10_g04620;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Probable serine/threonine-protein kinase At1g01540,CC_functional_completeness:complete,CC_gene:At1g01540,CC_gene:At4g34500,CC_gene:At2g42960;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034914001~ Probable serine/threonine-protein kinase At1g01540~ At1g01540~ complete;original_location=join(5451683..5452356%2C5452707..5452811%2C5453095..5453217%2C5453303..5453473%2C5453562..5453691%2C5453790..5453999%2C5454563..5454727);owner=coffea | |
| 37363 chr10 manual_curation exon 3608846 3609865 . - . Parent=GSCOCT00034914001 | |
| 37364 chr10 manual_curation exon 3608391 3608495 . - . Parent=GSCOCT00034914001 | |
| 37365 chr10 manual_curation exon 3607985 3608107 . - . Parent=GSCOCT00034914001 | |
| 37366 chr10 manual_curation exon 3607729 3607899 . - . Parent=GSCOCT00034914001 | |
| 37367 chr10 manual_curation exon 3607511 3607640 . - . Parent=GSCOCT00034914001 | |
| 37368 chr10 manual_curation exon 3607203 3607412 . - . Parent=GSCOCT00034914001 | |
| 37369 chr10 manual_curation exon 3605499 3606639 . - . Parent=GSCOCT00034914001 | |
| 37370 chr10 manual_curation CDS 3608846 3609519 . - 0 Parent=GSCOCT00034914001 | |
| 37371 chr10 manual_curation CDS 3608391 3608495 . - 2 Parent=GSCOCT00034914001 | |
| 37372 chr10 manual_curation CDS 3607985 3608107 . - 2 Parent=GSCOCT00034914001 | |
| 37373 chr10 manual_curation CDS 3607729 3607899 . - 2 Parent=GSCOCT00034914001 | |
| 37374 chr10 manual_curation CDS 3607511 3607640 . - 2 Parent=GSCOCT00034914001 | |
| 37375 chr10 manual_curation CDS 3607203 3607412 . - 0 Parent=GSCOCT00034914001 | |
| 37376 chr10 manual_curation CDS 3606475 3606639 . - 0 Parent=GSCOCT00034914001 | |
| 37377 chr10 manual_curation gene 3611393 3614528 . - . ID=GSCOCG00034913001;Name=Cc10_g04630 | |
| 37378 chr10 manual_curation mRNA 3611393 3614528 . - . ID=GSCOCT00034913001;Parent=GSCOCG00034913001;Name=Cc10_g04630 | |
| 37379 chr10 manual_curation polypeptide 3611701 3614272 . - . ID=GSCOCP00034913001;Dbxref=GENE3D:G3DSA:4.10.280.10,InterPro:IPR001092,InterPro:IPR011598,PFAM:PF00010,PROFILE:PS50888,SMART:SM00353,SUPERFAMILY:SSF47459,SwissProt:O80536,SwissProt:Q9FHA2,SwissProt:Q9FUA4,TAIR:AT1G09530.1,TAIR:AT4G36930.1,TAIR:AT5G67110.1,TrEMBL:B9MVT5,TrEMBL:B9R797,TrEMBL:E0CPT4;Derives_from=GSCOCT00034913001;Name=Cc10_g04630;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0030528,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:SPT,CC_gene:ALC,CC_gene:PIF3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034913001~ Putative uncharacterized protein~ SPT~ fragment;original_location=join(5446930..5447259%2C5447679..5447771%2C5447857..5447922%2C5448032..5448097%2C5449028..5449336%2C5449415..5449501);owner=coffea | |
| 37380 chr10 manual_curation exon 3613943 3614528 . - . Parent=GSCOCT00034913001 | |
| 37381 chr10 manual_curation exon 3613431 3613523 . - . Parent=GSCOCT00034913001 | |
| 37382 chr10 manual_curation exon 3613280 3613345 . - . Parent=GSCOCT00034913001 | |
| 37383 chr10 manual_curation exon 3613105 3613170 . - . Parent=GSCOCT00034913001 | |
| 37384 chr10 manual_curation exon 3611866 3612174 . - . Parent=GSCOCT00034913001 | |
| 37385 chr10 manual_curation exon 3611393 3611787 . - . Parent=GSCOCT00034913001 | |
| 37386 chr10 manual_curation CDS 3613943 3614272 . - 0 Parent=GSCOCT00034913001 | |
| 37387 chr10 manual_curation CDS 3613431 3613523 . - 0 Parent=GSCOCT00034913001 | |
| 37388 chr10 manual_curation CDS 3613280 3613345 . - 0 Parent=GSCOCT00034913001 | |
| 37389 chr10 manual_curation CDS 3613105 3613170 . - 0 Parent=GSCOCT00034913001 | |
| 37390 chr10 manual_curation CDS 3611866 3612174 . - 0 Parent=GSCOCT00034913001 | |
| 37391 chr10 manual_curation CDS 3611701 3611787 . - 0 Parent=GSCOCT00034913001 | |
| 37392 chr10 manual_curation gene 3617454 3620912 . - . ID=GSCOCG00034912001;Name=Cc10_g04640 | |
| 37393 chr10 manual_curation mRNA 3617454 3620912 . - . ID=GSCOCT00034912001;Parent=GSCOCG00034912001;Name=Cc10_g04640 | |
| 37394 chr10 manual_curation polypeptide 3617754 3620912 . - . ID=GSCOCP00034912001;Dbxref=InterPro:IPR001841,InterPro:IPR018957,PFAM:PF00097,PROFILE:PS50089,SMART:SM00184,SwissProt:E9QAU8,SwissProt:Q8L649,SwissProt:Q9LT17,TAIR:AT2G15530.4,TAIR:AT4G34040.1,TAIR:AT5G42940.1,TrEMBL:A5BKN3,TrEMBL:B9R796,TrEMBL:F6H1B8;Derives_from=GSCOCT00034912001;Name=Cc10_g04640;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative RING/U-box superfamily protein,CC_functional_completeness:complete,CC_gene:BBR,CC_gene:BB,CC_gene:Rnf165;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034912001~ Putative RING/U-box superfamily protein~ BBR~ complete;original_location=join(5440290..5440404%2C5440483..5441912%2C5442265..5442321%2C5442867..5442965%2C5443050..5443190%2C5443317..5443448);owner=coffea | |
| 37395 chr10 manual_curation exon 3620798 3620912 . - . Parent=GSCOCT00034912001 | |
| 37396 chr10 manual_curation exon 3619290 3620719 . - . Parent=GSCOCT00034912001 | |
| 37397 chr10 manual_curation exon 3618881 3618937 . - . Parent=GSCOCT00034912001 | |
| 37398 chr10 manual_curation exon 3618237 3618335 . - . Parent=GSCOCT00034912001 | |
| 37399 chr10 manual_curation exon 3618012 3618152 . - . Parent=GSCOCT00034912001 | |
| 37400 chr10 manual_curation exon 3617454 3617885 . - . Parent=GSCOCT00034912001 | |
| 37401 chr10 manual_curation CDS 3620798 3620912 . - 0 Parent=GSCOCT00034912001 | |
| 37402 chr10 manual_curation CDS 3619290 3620719 . - 1 Parent=GSCOCT00034912001 | |
| 37403 chr10 manual_curation CDS 3618881 3618937 . - 0 Parent=GSCOCT00034912001 | |
| 37404 chr10 manual_curation CDS 3618237 3618335 . - 0 Parent=GSCOCT00034912001 | |
| 37405 chr10 manual_curation CDS 3618012 3618152 . - 0 Parent=GSCOCT00034912001 | |
| 37406 chr10 manual_curation CDS 3617754 3617885 . - 0 Parent=GSCOCT00034912001 | |
| 37407 chr10 manual_curation gene 3620987 3622896 . - . ID=GSCOCG00034911001;Name=Cc10_g04650 | |
| 37408 chr10 manual_curation mRNA 3620987 3622896 . - . ID=GSCOCT00034911001;Parent=GSCOCG00034911001;Name=Cc10_g04650 | |
| 37409 chr10 manual_curation polypeptide 3622307 3622674 . - . ID=GSCOCP00034911001;Derives_from=GSCOCT00034911001;Name=Cc10_g04650;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034911001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(5438528..5438695%2C5438851..5438895);owner=coffea | |
| 37410 chr10 manual_curation exon 3620987 3621147 . - . Parent=GSCOCT00034911001 | |
| 37411 chr10 manual_curation exon 3622507 3622896 . - . Parent=GSCOCT00034911001 | |
| 37412 chr10 manual_curation exon 3622251 3622351 . - . Parent=GSCOCT00034911001 | |
| 37413 chr10 manual_curation CDS 3622507 3622674 . - 0 Parent=GSCOCT00034911001 | |
| 37414 chr10 manual_curation CDS 3622307 3622351 . - 0 Parent=GSCOCT00034911001 | |
| 37415 chr10 manual_curation gene 3627002 3629365 . - . ID=GSCOCG00034909001;Name=Cc10_g04660 | |
| 37416 chr10 manual_curation mRNA 3627002 3629365 . - . ID=GSCOCT00034909001;Parent=GSCOCG00034909001;Name=Cc10_g04660 | |
| 37417 chr10 manual_curation polypeptide 3627568 3629365 . - . ID=GSCOCP00034909001;Dbxref=InterPro:IPR002136,InterPro:IPR013005,InterPro:IPR015498,PANTHER:PTHR10746,PANTHER:PTHR10746:SF2,PFAM:PF00573,SUPERFAMILY:SSF52166,SwissProt:A5V601,SwissProt:Q2G8X9,SwissProt:Q2N9B2,TAIR:AT2G20060.1,TrEMBL:B9GD67,TrEMBL:B9RXF3,TrEMBL:Q2QQM8;Derives_from=GSCOCT00034909001;Name=Cc10_g04660;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,GO:0019843,CC_EC_number:missing_EC_number,PRODUCT:Putative 50S ribosomal protein L4,CC_functional_completeness:fragment,CC_gene:rplD;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034909001~ Putative 50S ribosomal protein L4~ rplD~ fragment;original_location=join(5431837..5431866%2C5432849..5433022%2C5433533..5433634);owner=coffea | |
| 37418 chr10 manual_curation exon 3629336 3629365 . - . Parent=GSCOCT00034909001 | |
| 37419 chr10 manual_curation exon 3628180 3628353 . - . Parent=GSCOCT00034909001 | |
| 37420 chr10 manual_curation exon 3627002 3627669 . - . Parent=GSCOCT00034909001 | |
| 37421 chr10 manual_curation CDS 3629336 3629365 . - 0 Parent=GSCOCT00034909001 | |
| 37422 chr10 manual_curation CDS 3628180 3628353 . - 0 Parent=GSCOCT00034909001 | |
| 37423 chr10 manual_curation CDS 3627568 3627669 . - 0 Parent=GSCOCT00034909001 | |
| 37424 chr10 manual_curation gene 3629438 3631914 . - . ID=GSCOCG00034908001;Name=Cc10_g04670 | |
| 37425 chr10 manual_curation mRNA 3629438 3631914 . - . ID=GSCOCT00034908001;Parent=GSCOCG00034908001;Name=Cc10_g04670 | |
| 37426 chr10 manual_curation polypeptide 3629438 3631524 . - . ID=GSCOCP00034908001;Dbxref=InterPro:IPR002136,InterPro:IPR013005,InterPro:IPR015498,PANTHER:PTHR10746,PANTHER:PTHR10746:SF2,PFAM:PF00573,SUPERFAMILY:SSF52166,SwissProt:B6IRQ7,SwissProt:Q2RQW1,SwissProt:Q5PA59,TAIR:AT1G07320.1,TAIR:AT2G20060.1,TrEMBL:B9RXF3,TrEMBL:I1KZW0,TrEMBL:Q8LE97;Derives_from=GSCOCT00034908001;Name=Cc10_g04670;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,GO:0019843,CC_EC_number:missing_EC_number,PRODUCT:Ribosomal protein L4/L1 family,CC_functional_completeness:fragment,CC_gene:rplD;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034908001~ Ribosomal protein L4/L1 family~ rplD~ fragment;original_location=join(5429678..5429753%2C5429845..5429909%2C5430114..5430240%2C5430912..5431060%2C5431436..5431543%2C5431633..5431764);owner=coffea | |
| 37427 chr10 manual_curation exon 3631783 3631914 . - . Parent=GSCOCT00034908001 | |
| 37428 chr10 manual_curation exon 3631449 3631634 . - . Parent=GSCOCT00034908001 | |
| 37429 chr10 manual_curation exon 3631293 3631357 . - . Parent=GSCOCT00034908001 | |
| 37430 chr10 manual_curation exon 3630962 3631088 . - . Parent=GSCOCT00034908001 | |
| 37431 chr10 manual_curation exon 3630142 3630290 . - . Parent=GSCOCT00034908001 | |
| 37432 chr10 manual_curation exon 3629659 3629766 . - . Parent=GSCOCT00034908001 | |
| 37433 chr10 manual_curation exon 3629438 3629569 . - . Parent=GSCOCT00034908001 | |
| 37434 chr10 manual_curation CDS 3631449 3631524 . - 0 Parent=GSCOCT00034908001 | |
| 37435 chr10 manual_curation CDS 3631293 3631357 . - 1 Parent=GSCOCT00034908001 | |
| 37436 chr10 manual_curation CDS 3630962 3631088 . - 0 Parent=GSCOCT00034908001 | |
| 37437 chr10 manual_curation CDS 3630142 3630290 . - 1 Parent=GSCOCT00034908001 | |
| 37438 chr10 manual_curation CDS 3629659 3629766 . - 0 Parent=GSCOCT00034908001 | |
| 37439 chr10 manual_curation CDS 3629438 3629569 . - 0 Parent=GSCOCT00034908001 | |
| 37440 chr10 manual_curation gene 3632331 3636291 . - . ID=GSCOCG00034907001;Name=Cc10_g04680 | |
| 37441 chr10 manual_curation mRNA 3632331 3636291 . - . ID=GSCOCT00034907001;Parent=GSCOCG00034907001;Name=Cc10_g04680 | |
| 37442 chr10 manual_curation polypeptide 3633248 3636069 . - . ID=GSCOCP00034907001;Dbxref=InterPro:IPR003441,PFAM:PF02365,PROFILE:PS51005,SUPERFAMILY:SSF101941,SwissProt:Q52QH4,SwissProt:Q93VY3,SwissProt:Q9LDY8,TAIR:AT1G76420.1,TAIR:AT3G15500.1,TAIR:AT3G17730.1,TrEMBL:B9MVT6,TrEMBL:B9R794,TrEMBL:F6H1B7;Derives_from=GSCOCT00034907001;Name=Cc10_g04680;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:NAC68,CC_gene:NAC072,CC_gene:NAC055;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034907001~ Putative uncharacterized protein~ NAC68~ complete;original_location=join(5425133..5425600%2C5426841..5427107%2C5427880..5427954);owner=coffea | |
| 37443 chr10 manual_curation exon 3635602 3636291 . - . Parent=GSCOCT00034907001 | |
| 37444 chr10 manual_curation exon 3634095 3634361 . - . Parent=GSCOCT00034907001 | |
| 37445 chr10 manual_curation exon 3632331 3633322 . - . Parent=GSCOCT00034907001 | |
| 37446 chr10 manual_curation CDS 3635602 3636069 . - 0 Parent=GSCOCT00034907001 | |
| 37447 chr10 manual_curation CDS 3634095 3634361 . - 0 Parent=GSCOCT00034907001 | |
| 37448 chr10 manual_curation CDS 3633248 3633322 . - 0 Parent=GSCOCT00034907001 | |
| 37449 chr10 manual_curation gene 3639710 3644566 . - . ID=GSCOCG00034905001;Name=Cc10_g04690 | |
| 37450 chr10 manual_curation mRNA 3639710 3644566 . - . ID=GSCOCT00034905001;Parent=GSCOCG00034905001;Name=Cc10_g04690 | |
| 37451 chr10 manual_curation polypeptide 3640092 3644363 . - . ID=GSCOCP00034905001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR002004,InterPro:IPR003954,InterPro:IPR006515,InterPro:IPR012677,PFAM:PF00076,PFAM:PF00658,PROFILE:PS50102,PROFILE:PS51309,SMART:SM00360,SMART:SM00361,SMART:SM00517,SUPERFAMILY:SSF63570,SwissProt:O64380,SwissProt:P42731,SwissProt:Q05196,TAIR:AT1G49760.1,TAIR:AT2G23350.1,TAIR:AT4G34110.1,TIGRFAMs:TIGR01628,TrEMBL:A5B5N0,TrEMBL:I1JE12,TrEMBL:I1MXM6;Derives_from=GSCOCT00034905001;Name=Cc10_g04690;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,GO:0003723,CC_EC_number:missing_EC_number,PRODUCT:Polyadenylate-binding protein 2,CC_functional_completeness:complete,CC_gene:PAB2,CC_gene:PAB3,CC_gene:PAB5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034905001~ Polyadenylate-binding protein 2~ PAB2~ complete;original_location=join(5416839..5417127%2C5417777..5417895%2C5418426..5419082%2C5419227..5419304%2C5419386..5419475%2C5420077..5420214%2C5420352..5420519%2C5420595..5420795%2C5420874..5421110);owner=coffea | |
| 37452 chr10 manual_curation exon 3644075 3644566 . - . Parent=GSCOCT00034905001 | |
| 37453 chr10 manual_curation exon 3643307 3643425 . - . Parent=GSCOCT00034905001 | |
| 37454 chr10 manual_curation exon 3642120 3642776 . - . Parent=GSCOCT00034905001 | |
| 37455 chr10 manual_curation exon 3641898 3641975 . - . Parent=GSCOCT00034905001 | |
| 37456 chr10 manual_curation exon 3641727 3641816 . - . Parent=GSCOCT00034905001 | |
| 37457 chr10 manual_curation exon 3640988 3641125 . - . Parent=GSCOCT00034905001 | |
| 37458 chr10 manual_curation exon 3640683 3640850 . - . Parent=GSCOCT00034905001 | |
| 37459 chr10 manual_curation exon 3640407 3640607 . - . Parent=GSCOCT00034905001 | |
| 37460 chr10 manual_curation exon 3639710 3640328 . - . Parent=GSCOCT00034905001 | |
| 37461 chr10 manual_curation CDS 3644075 3644363 . - 0 Parent=GSCOCT00034905001 | |
| 37462 chr10 manual_curation CDS 3643307 3643425 . - 1 Parent=GSCOCT00034905001 | |
| 37463 chr10 manual_curation CDS 3642120 3642776 . - 0 Parent=GSCOCT00034905001 | |
| 37464 chr10 manual_curation CDS 3641898 3641975 . - 0 Parent=GSCOCT00034905001 | |
| 37465 chr10 manual_curation CDS 3641727 3641816 . - 0 Parent=GSCOCT00034905001 | |
| 37466 chr10 manual_curation CDS 3640988 3641125 . - 0 Parent=GSCOCT00034905001 | |
| 37467 chr10 manual_curation CDS 3640683 3640850 . - 0 Parent=GSCOCT00034905001 | |
| 37468 chr10 manual_curation CDS 3640407 3640607 . - 0 Parent=GSCOCT00034905001 | |
| 37469 chr10 manual_curation CDS 3640092 3640328 . - 0 Parent=GSCOCT00034905001 | |
| 37470 chr10 manual_curation gene 3647543 3649927 . - . ID=GSCOCG00034904001;Name=Cc10_g04700 | |
| 37471 chr10 manual_curation mRNA 3647543 3649927 . - . ID=GSCOCT00034904001;Parent=GSCOCG00034904001;Name=Cc10_g04700 | |
| 37472 chr10 manual_curation polypeptide 3648850 3649927 . - . ID=GSCOCP00034904001;Dbxref=InterPro:IPR001356,InterPro:IPR009057,PFAM:PF00046,PROFILE:PS50071,SMART:SM00389,SUPERFAMILY:SSF46689,SwissProt:Q25AM2,SwissProt:Q6X7J9,SwissProt:Q7XTV3,TAIR:AT1G46480.1,TAIR:AT2G28610.1,TAIR:AT3G18010.1,TrEMBL:A5B5M9,TrEMBL:A9PBT6,TrEMBL:B9MVU1;Derives_from=GSCOCT00034904001;Name=Cc10_g04700;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0043565,CC_EC_number:missing_EC_number,PRODUCT:WUSCHEL-related homeobox 4,CC_functional_completeness:complete,CC_gene:WOX4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034904001~ WUSCHEL-related homeobox 4~ WOX4~ complete;original_location=join(5411275..5411493%2C5411650..5411949%2C5412206..5412352);owner=coffea | |
| 37473 chr10 manual_curation exon 3649709 3649927 . - . Parent=GSCOCT00034904001 | |
| 37474 chr10 manual_curation exon 3649253 3649552 . - . Parent=GSCOCT00034904001 | |
| 37475 chr10 manual_curation exon 3647543 3648996 . - . Parent=GSCOCT00034904001 | |
| 37476 chr10 manual_curation CDS 3649709 3649927 . - 0 Parent=GSCOCT00034904001 | |
| 37477 chr10 manual_curation CDS 3649253 3649552 . - 0 Parent=GSCOCT00034904001 | |
| 37478 chr10 manual_curation CDS 3648850 3648996 . - 0 Parent=GSCOCT00034904001 | |
| 37479 chr10 manual_curation gene 3668524 3670171 . - . ID=GSCOCG00034903001;Name=Cc10_g04710 | |
| 37480 chr10 manual_curation mRNA 3668524 3670171 . - . ID=GSCOCT00034903001;Parent=GSCOCG00034903001;Name=Cc10_g04710 | |
| 37481 chr10 manual_curation polypeptide 3669247 3669693 . - . ID=GSCOCP00034903001;Dbxref=GENE3D:G3DSA:3.30.730.10,InterPro:IPR001471,InterPro:IPR016177,PFAM:PF00847,PRINTS:PR00367,PROFILE:PS51032,SMART:SM00380,SUPERFAMILY:SSF54171,SwissProt:O22174,SwissProt:Q8LC30,SwissProt:Q9SNE1,TAIR:AT1G46768.1,TAIR:AT2G23340.1,TAIR:AT3G50260.1,TrEMBL:A9PL97,TrEMBL:F6H1A8,TrEMBL:G3K510;Derives_from=GSCOCT00034903001;Name=Cc10_g04710;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,CC_EC_number:missing_EC_number,PRODUCT:Ethylene-responsive transcription factor ERF011,CC_functional_completeness:complete,CC_gene:ERF011,CC_gene:RAP2-1,CC_gene:ERF008;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034903001~ Ethylene-responsive transcription factor ERF011~ ERF011~ complete;original_location=5391509..5391955;owner=coffea | |
| 37482 chr10 manual_curation exon 3668524 3670171 . - . Parent=GSCOCT00034903001 | |
| 37483 chr10 manual_curation CDS 3669247 3669693 . - 0 Parent=GSCOCT00034903001 | |
| 37484 chr10 manual_curation gene 3673759 3674962 . + . ID=GSCOCG00034902001;Name=Cc10_g04720 | |
| 37485 chr10 manual_curation mRNA 3673759 3674962 . + . ID=GSCOCT00034902001;Parent=GSCOCG00034902001;Name=Cc10_g04720 | |
| 37486 chr10 manual_curation polypeptide 3674702 3674962 . + . ID=GSCOCP00034902001;Derives_from=GSCOCT00034902001;Name=Cc10_g04720;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034902001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(5386240..5386500);owner=coffea | |
| 37487 chr10 manual_curation exon 3673759 3674962 . + . Parent=GSCOCT00034902001 | |
| 37488 chr10 manual_curation CDS 3674702 3674962 . + 0 Parent=GSCOCT00034902001 | |
| 37489 chr10 manual_curation gene 3675431 3679359 . - . ID=GSCOCG00034901001;Name=Cc10_g04730 | |
| 37490 chr10 manual_curation mRNA 3675431 3679359 . - . ID=GSCOCT00034901001;Parent=GSCOCG00034901001;Name=Cc10_g04730 | |
| 37491 chr10 manual_curation polypeptide 3677947 3679089 . - . ID=GSCOCP00034901001;Dbxref=InterPro:IPR007087,InterPro:IPR015880,PROFILE:PS50157,PROSITE:PS00028,SMART:SM00355,TAIR:AT4G12240.1,TAIR:AT5G52010.1,TrEMBL:B9MVU3,TrEMBL:B9R788,TrEMBL:F6H1A7;Derives_from=GSCOCT00034901001;Name=Cc10_g04730;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:C2H2-like zinc finger protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034901001~ C2H2-like zinc finger protein~ unknown_gene~ complete;original_location=5382113..5383255;owner=coffea | |
| 37492 chr10 manual_curation exon 3675431 3675788 . - . Parent=GSCOCT00034901001 | |
| 37493 chr10 manual_curation exon 3677754 3679359 . - . Parent=GSCOCT00034901001 | |
| 37494 chr10 manual_curation CDS 3677947 3679089 . - 0 Parent=GSCOCT00034901001 | |
| 37495 chr10 manual_curation gene 3684687 3687529 . + . ID=GSCOCG00034900001;Name=Cc10_g04740 | |
| 37496 chr10 manual_curation mRNA 3684687 3687529 . + . ID=GSCOCT00034900001;Parent=GSCOCG00034900001;Name=Cc10_g04740 | |
| 37497 chr10 manual_curation polypeptide 3685009 3687094 . + . ID=GSCOCP00034900001;Dbxref=InterPro:IPR003877,InterPro:IPR018355,PFAM:PF00622,SMART:SM00449,TAIR:AT4G06534.1,TAIR:AT4G06536.1,TrEMBL:B9R787,TrEMBL:F6H1A6,TrEMBL:G7J6Y7;Derives_from=GSCOCT00034900001;Name=Cc10_g04740;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:SPla/RYanodine receptor (SPRY) domain-containing protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034900001~ SPla/RYanodine receptor (SPRY) domain-containing protein~ unknown_gene~ modules;original_location=complement(join(5375260..5376193%2C5374108..5374604));owner=coffea | |
| 37498 chr10 manual_curation exon 3686598 3687529 . + . Parent=GSCOCT00034900001 | |
| 37499 chr10 manual_curation exon 3684687 3685942 . + . Parent=GSCOCT00034900001 | |
| 37500 chr10 manual_curation CDS 3686598 3687094 . + 1 Parent=GSCOCT00034900001 | |
| 37501 chr10 manual_curation CDS 3685009 3685942 . + 0 Parent=GSCOCT00034900001 | |
| 37502 chr10 manual_curation gene 3691046 3692506 . + . ID=GSCOCG00034899001;Name=Cc10_g04750 | |
| 37503 chr10 manual_curation mRNA 3691046 3692506 . + . ID=GSCOCT00034899001;Parent=GSCOCG00034899001;Name=Cc10_g04750 | |
| 37504 chr10 manual_curation polypeptide 3691046 3692506 . + . ID=GSCOCP00034899001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,PROSITE:PS00375,SwissProt:Q2V6J9,SwissProt:Q7Y232,SwissProt:Q9ZQG4,TAIR:AT2G15480.1,TAIR:AT2G15490.1,TAIR:AT4G34131.1,TrEMBL:F8WKW2,TrEMBL:F8WKW3,TrEMBL:Q5H861;Derives_from=GSCOCT00034899001;Name=Cc10_g04750;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:Putative UDP-glycosyltransferase 73B5,CC_functional_completeness:complete,CC_gene:UGT73B5,CC_gene:UGT73B4,CC_gene:GT7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034899001~ Putative UDP-glycosyltransferase 73B5~ UGT73B5~ complete;original_location=complement(5368696..5370156);owner=coffea | |
| 37505 chr10 manual_curation exon 3691046 3692506 . + . Parent=GSCOCT00034899001 | |
| 37506 chr10 manual_curation CDS 3691046 3692506 . + 0 Parent=GSCOCT00034899001 | |
| 37507 chr10 manual_curation gene 3693898 3698286 . - . ID=GSCOCG00034897001;Name=Cc10_g04760 | |
| 37508 chr10 manual_curation mRNA 3693898 3698286 . - . ID=GSCOCT00034897001;Parent=GSCOCG00034897001;Name=Cc10_g04760 | |
| 37509 chr10 manual_curation polypeptide 3694273 3698174 . - . ID=GSCOCP00034897001;Dbxref=GENE3D:G3DSA:3.10.110.10,InterPro:IPR000608,InterPro:IPR016135,PFAM:PF00179,PROFILE:PS50127,PROSITE:PS00183,SMART:SM00212,SUPERFAMILY:SSF54495,SwissProt:Q28CQ4,SwissProt:Q42551,SwissProt:Q9NGP4,TAIR:AT1G14400.1,TAIR:AT2G02760.1,TAIR:AT3G57870.1,TrEMBL:A5B6X4,TrEMBL:I1P711,TrEMBL:Q8H8G9;Derives_from=GSCOCT00034897001;Name=Cc10_g04760;Ontology_term=CC_evidence_code:ISS,GO:0019787,GO:0043687,GO:0051246,CC_EC_number:6.3.2.19,PRODUCT:SUMO-conjugating enzyme SCE1,CC_functional_completeness:complete,CC_gene:SCE1,CC_gene:ubc9,CC_gene:ube2i;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034897001~ SUMO-conjugating enzyme SCE1~ SCE1~ complete;original_location=join(5363028..5363096%2C5363301..5363384%2C5366409..5366561%2C5366665..5366778%2C5366867..5366929);owner=coffea | |
| 37510 chr10 manual_curation exon 3698106 3698286 . - . Parent=GSCOCT00034897001 | |
| 37511 chr10 manual_curation exon 3697818 3697901 . - . Parent=GSCOCT00034897001 | |
| 37512 chr10 manual_curation exon 3694641 3694793 . - . Parent=GSCOCT00034897001 | |
| 37513 chr10 manual_curation exon 3694424 3694537 . - . Parent=GSCOCT00034897001 | |
| 37514 chr10 manual_curation exon 3693898 3694335 . - . Parent=GSCOCT00034897001 | |
| 37515 chr10 manual_curation CDS 3698106 3698174 . - 0 Parent=GSCOCT00034897001 | |
| 37516 chr10 manual_curation CDS 3697818 3697901 . - 0 Parent=GSCOCT00034897001 | |
| 37517 chr10 manual_curation CDS 3694641 3694793 . - 0 Parent=GSCOCT00034897001 | |
| 37518 chr10 manual_curation CDS 3694424 3694537 . - 0 Parent=GSCOCT00034897001 | |
| 37519 chr10 manual_curation CDS 3694273 3694335 . - 0 Parent=GSCOCT00034897001 | |
| 37520 chr10 manual_curation gene 3709053 3719885 . + . ID=GSCOCG00034895001;Name=Cc10_g04770 | |
| 37521 chr10 manual_curation mRNA 3709053 3719885 . + . ID=GSCOCT00034895001;Parent=GSCOCG00034895001;Name=Cc10_g04770 | |
| 37522 chr10 manual_curation polypeptide 3709053 3719885 . + . ID=GSCOCP00034895001;Dbxref=GENE3D:G3DSA:3.40.850.10,InterPro:IPR001752,InterPro:IPR019821,PFAM:PF00225,PRINTS:PR00380,PROFILE:PS50067,PROSITE:PS00411,SMART:SM00129,SwissProt:O95239,SwissProt:P33174,SwissProt:Q91784,TAIR:AT3G50240.1,TAIR:AT5G47820.1,TAIR:AT5G60930.1,TrEMBL:A5B6X6,TrEMBL:B9R784,TrEMBL:E0CPS1;Derives_from=GSCOCT00034895001;Name=Cc10_g04770;Ontology_term=CC_evidence_code:ISS,GO:0003777,GO:0005524,GO:0007018,CC_EC_number:missing_EC_number,PRODUCT:Putative Chromosome-associated kinesin KIF4A,CC_functional_completeness:fragment,CC_gene:KIF4A,CC_gene:kif4,CC_gene:Kif4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034895001~ Putative Chromosome-associated kinesin KIF4A~ KIF4A~ fragment;original_location=complement(join(5352006..5352149%2C5350117..5350263%2C5349857..5350006%2C5349496..5349749%2C5348641..5348828%2C5348431..5348555%2C5347512..5347548%2C5347314..5347405%2C5347094..5347204%2C5346853..5346966%2C5346637..5346724%2C5346350..5346462%2C5345404..5345502%2C5345206..5345319%2C5344997..5345113%2C5344822..5344902%2C5344510..5344581%2C5343794..5343887%2C5343528..5343559%2C5343345..5343442%2C5343148..5343246%2C5342773..5342994%2C5342106..5342268%2C5341629..5341775%2C5341317..5341544));owner=coffea | |
| 37523 chr10 manual_curation exon 3719658 3719885 . + . Parent=GSCOCT00034895001 | |
| 37524 chr10 manual_curation exon 3719427 3719573 . + . Parent=GSCOCT00034895001 | |
| 37525 chr10 manual_curation exon 3718934 3719096 . + . Parent=GSCOCT00034895001 | |
| 37526 chr10 manual_curation exon 3718208 3718429 . + . Parent=GSCOCT00034895001 | |
| 37527 chr10 manual_curation exon 3717956 3718054 . + . Parent=GSCOCT00034895001 | |
| 37528 chr10 manual_curation exon 3717760 3717857 . + . Parent=GSCOCT00034895001 | |
| 37529 chr10 manual_curation exon 3717643 3717674 . + . Parent=GSCOCT00034895001 | |
| 37530 chr10 manual_curation exon 3717315 3717408 . + . Parent=GSCOCT00034895001 | |
| 37531 chr10 manual_curation exon 3716621 3716692 . + . Parent=GSCOCT00034895001 | |
| 37532 chr10 manual_curation exon 3716300 3716380 . + . Parent=GSCOCT00034895001 | |
| 37533 chr10 manual_curation exon 3716089 3716205 . + . Parent=GSCOCT00034895001 | |
| 37534 chr10 manual_curation exon 3715883 3715996 . + . Parent=GSCOCT00034895001 | |
| 37535 chr10 manual_curation exon 3715700 3715798 . + . Parent=GSCOCT00034895001 | |
| 37536 chr10 manual_curation exon 3714740 3714852 . + . Parent=GSCOCT00034895001 | |
| 37537 chr10 manual_curation exon 3714478 3714565 . + . Parent=GSCOCT00034895001 | |
| 37538 chr10 manual_curation exon 3714236 3714349 . + . Parent=GSCOCT00034895001 | |
| 37539 chr10 manual_curation exon 3713998 3714108 . + . Parent=GSCOCT00034895001 | |
| 37540 chr10 manual_curation exon 3713797 3713888 . + . Parent=GSCOCT00034895001 | |
| 37541 chr10 manual_curation exon 3713654 3713690 . + . Parent=GSCOCT00034895001 | |
| 37542 chr10 manual_curation exon 3712647 3712771 . + . Parent=GSCOCT00034895001 | |
| 37543 chr10 manual_curation exon 3712374 3712561 . + . Parent=GSCOCT00034895001 | |
| 37544 chr10 manual_curation exon 3711453 3711706 . + . Parent=GSCOCT00034895001 | |
| 37545 chr10 manual_curation exon 3711196 3711345 . + . Parent=GSCOCT00034895001 | |
| 37546 chr10 manual_curation exon 3710939 3711085 . + . Parent=GSCOCT00034895001 | |
| 37547 chr10 manual_curation exon 3709053 3709196 . + . Parent=GSCOCT00034895001 | |
| 37548 chr10 manual_curation CDS 3719658 3719885 . + 0 Parent=GSCOCT00034895001 | |
| 37549 chr10 manual_curation CDS 3719427 3719573 . + 0 Parent=GSCOCT00034895001 | |
| 37550 chr10 manual_curation CDS 3718934 3719096 . + 2 Parent=GSCOCT00034895001 | |
| 37551 chr10 manual_curation CDS 3718208 3718429 . + 2 Parent=GSCOCT00034895001 | |
| 37552 chr10 manual_curation CDS 3717956 3718054 . + 2 Parent=GSCOCT00034895001 | |
| 37553 chr10 manual_curation CDS 3717760 3717857 . + 0 Parent=GSCOCT00034895001 | |
| 37554 chr10 manual_curation CDS 3717643 3717674 . + 1 Parent=GSCOCT00034895001 | |
| 37555 chr10 manual_curation CDS 3717315 3717408 . + 0 Parent=GSCOCT00034895001 | |
| 37556 chr10 manual_curation CDS 3716621 3716692 . + 0 Parent=GSCOCT00034895001 | |
| 37557 chr10 manual_curation CDS 3716300 3716380 . + 0 Parent=GSCOCT00034895001 | |
| 37558 chr10 manual_curation CDS 3716089 3716205 . + 0 Parent=GSCOCT00034895001 | |
| 37559 chr10 manual_curation CDS 3715883 3715996 . + 0 Parent=GSCOCT00034895001 | |
| 37560 chr10 manual_curation CDS 3715700 3715798 . + 0 Parent=GSCOCT00034895001 | |
| 37561 chr10 manual_curation CDS 3714740 3714852 . + 1 Parent=GSCOCT00034895001 | |
| 37562 chr10 manual_curation CDS 3714478 3714565 . + 0 Parent=GSCOCT00034895001 | |
| 37563 chr10 manual_curation CDS 3714236 3714349 . + 0 Parent=GSCOCT00034895001 | |
| 37564 chr10 manual_curation CDS 3713998 3714108 . + 0 Parent=GSCOCT00034895001 | |
| 37565 chr10 manual_curation CDS 3713797 3713888 . + 1 Parent=GSCOCT00034895001 | |
| 37566 chr10 manual_curation CDS 3713654 3713690 . + 0 Parent=GSCOCT00034895001 | |
| 37567 chr10 manual_curation CDS 3712647 3712771 . + 1 Parent=GSCOCT00034895001 | |
| 37568 chr10 manual_curation CDS 3712374 3712561 . + 2 Parent=GSCOCT00034895001 | |
| 37569 chr10 manual_curation CDS 3711453 3711706 . + 0 Parent=GSCOCT00034895001 | |
| 37570 chr10 manual_curation CDS 3711196 3711345 . + 0 Parent=GSCOCT00034895001 | |
| 37571 chr10 manual_curation CDS 3710939 3711085 . + 0 Parent=GSCOCT00034895001 | |
| 37572 chr10 manual_curation CDS 3709053 3709196 . + 0 Parent=GSCOCT00034895001 | |
| 37573 chr10 manual_curation gene 3721328 3723991 . - . ID=GSCOCG00034893001;Name=Cc10_g04780 | |
| 37574 chr10 manual_curation mRNA 3721328 3723991 . - . ID=GSCOCT00034893001;Parent=GSCOCG00034893001;Name=Cc10_g04780 | |
| 37575 chr10 manual_curation polypeptide 3721759 3723696 . - . ID=GSCOCP00034893001;Dbxref=TAIR:AT5G47830.1,TrEMBL:B9R783,TrEMBL:F6GZZ1,TrEMBL:I1MXL6;Derives_from=GSCOCT00034893001;Name=Cc10_g04780;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B Has 35333 Blast hits to 34131 proteins in 2444 species,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034893001~ Putative unknown protein%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(5337506..5337679%2C5339078..5339443);owner=coffea | |
| 37576 chr10 manual_curation exon 3723523 3723991 . - . Parent=GSCOCT00034893001 | |
| 37577 chr10 manual_curation exon 3721328 3722124 . - . Parent=GSCOCT00034893001 | |
| 37578 chr10 manual_curation CDS 3723523 3723696 . - 0 Parent=GSCOCT00034893001 | |
| 37579 chr10 manual_curation CDS 3721759 3722124 . - 0 Parent=GSCOCT00034893001 | |
| 37580 chr10 manual_curation gene 3725909 3732693 . - . ID=GSCOCG00034892001;Name=Cc10_g04790 | |
| 37581 chr10 manual_curation mRNA 3725909 3732693 . - . ID=GSCOCT00034892001;Parent=GSCOCG00034892001;Name=Cc10_g04790 | |
| 37582 chr10 manual_curation polypeptide 3725909 3732693 . - . ID=GSCOCP00034892001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR011009,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PROFILE:PS50011,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q84MA9,SwissProt:Q93Y06,SwissProt:Q9M9C5,TAIR:AT3G50230.1,TAIR:AT5G43020.1,TAIR:AT5G67200.1,TrEMBL:A5B6X8,TrEMBL:B9R782,TrEMBL:Q2LJM1;Derives_from=GSCOCT00034892001;Name=Cc10_g04790;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Probable inactive receptor kinase At5g67200,CC_functional_completeness:complete,CC_gene:At5g67200,CC_gene:At1g60630,CC_gene:At1g68400;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034892001~ Probable inactive receptor kinase At5g67200~ At5g67200~ complete;original_location=join(5328509..5328569%2C5328693..5330414%2C5334710..5335293);owner=coffea | |
| 37583 chr10 manual_curation exon 3732633 3732693 . - . Parent=GSCOCT00034892001 | |
| 37584 chr10 manual_curation exon 3730788 3732509 . - . Parent=GSCOCT00034892001 | |
| 37585 chr10 manual_curation exon 3725909 3726492 . - . Parent=GSCOCT00034892001 | |
| 37586 chr10 manual_curation CDS 3732633 3732693 . - 0 Parent=GSCOCT00034892001 | |
| 37587 chr10 manual_curation CDS 3730788 3732509 . - 1 Parent=GSCOCT00034892001 | |
| 37588 chr10 manual_curation CDS 3725909 3726492 . - 1 Parent=GSCOCT00034892001 | |
| 37589 chr10 manual_curation gene 3740226 3741925 . - . ID=GSCOCG00034891001;Name=Cc10_g04800 | |
| 37590 chr10 manual_curation mRNA 3740226 3741925 . - . ID=GSCOCT00034891001;Parent=GSCOCG00034891001;Name=Cc10_g04800 | |
| 37591 chr10 manual_curation polypeptide 3740356 3741612 . - . ID=GSCOCP00034891001;Dbxref=SwissProt:Q8W3M4,SwissProt:Q9LHF1,SwissProt:Q9T0K5,TAIR:AT1G49750.1,TAIR:AT3G19320.1,TAIR:AT4G06744.1,TrEMBL:B9MVU9,TrEMBL:B9R781,TrEMBL:I1MXL5;Derives_from=GSCOCT00034891001;Name=Cc10_g04800;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterized protein At4g06744,CC_functional_completeness:complete,CC_gene:At4g06744,CC_gene:LRX4,CC_gene:LRX3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034891001~ Uncharacterized protein At4g06744~ At4g06744~ complete;original_location=5319590..5320846;owner=coffea | |
| 37592 chr10 manual_curation exon 3740226 3741925 . - . Parent=GSCOCT00034891001 | |
| 37593 chr10 manual_curation CDS 3740356 3741612 . - 0 Parent=GSCOCT00034891001 | |
| 37594 chr10 manual_curation gene 3745747 3747956 . - . ID=GSCOCG00034890001;Name=Cc10_g04810 | |
| 37595 chr10 manual_curation mRNA 3745747 3747956 . - . ID=GSCOCT00034890001;Parent=GSCOCG00034890001;Name=Cc10_g04810 | |
| 37596 chr10 manual_curation polypeptide 3746305 3747841 . - . ID=GSCOCP00034890001;Dbxref=InterPro:IPR003657,InterPro:IPR018872,PFAM:PF03106,PFAM:PF10533,PROFILE:PS50811,SMART:SM00774,SwissProt:O22176,SwissProt:Q9STX0,SwissProt:Q9SV15,TAIR:AT2G23320.1,TAIR:AT4G24240.1,TAIR:AT4G31550.1,TrEMBL:A7UGC9,TrEMBL:C7ENF8,TrEMBL:Q9FXS1;Derives_from=GSCOCT00034890001;Name=Cc10_g04810;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0043565,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable WRKY transcription factor 7,CC_functional_completeness:complete,CC_gene:WRKY7,CC_gene:WRKY15,CC_gene:WRKY11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034890001~ Putative Probable WRKY transcription factor 7~ WRKY7~ complete;original_location=join(5313361..5314160%2C5314350..5314475%2C5314735..5314897);owner=coffea | |
| 37597 chr10 manual_curation exon 3747042 3747956 . - . Parent=GSCOCT00034890001 | |
| 37598 chr10 manual_curation exon 3746727 3746852 . - . Parent=GSCOCT00034890001 | |
| 37599 chr10 manual_curation exon 3745747 3746467 . - . Parent=GSCOCT00034890001 | |
| 37600 chr10 manual_curation CDS 3747042 3747841 . - 0 Parent=GSCOCT00034890001 | |
| 37601 chr10 manual_curation CDS 3746727 3746852 . - 2 Parent=GSCOCT00034890001 | |
| 37602 chr10 manual_curation CDS 3746305 3746467 . - 2 Parent=GSCOCT00034890001 | |
| 37603 chr10 manual_curation gene 3763309 3767223 . + . ID=GSCOCG00034889001;Name=Cc10_g04820 | |
| 37604 chr10 manual_curation mRNA 3763309 3767223 . + . ID=GSCOCT00034889001;Parent=GSCOCG00034889001;Name=Cc10_g04820 | |
| 37605 chr10 manual_curation polypeptide 3763636 3766743 . + . ID=GSCOCP00034889001;Dbxref=InterPro:IPR000118,InterPro:IPR000169,InterPro:IPR000668,InterPro:IPR013128,InterPro:IPR013201,PANTHER:PTHR12411,PFAM:PF00112,PFAM:PF00396,PFAM:PF08246,PRINTS:PR00705,PROSITE:PS00139,PROSITE:PS00639,PROSITE:PS00640,SMART:SM00277,SMART:SM00645,SMART:SM00848,SwissProt:P25776,SwissProt:P25777,SwissProt:P43297,TAIR:AT1G47128.1,TAIR:AT3G19390.1,TAIR:AT5G43060.1,TrEMBL:I1M8Q5,TrEMBL:Q155L4,TrEMBL:Q2AAC8;Derives_from=GSCOCT00034889001;Name=Cc10_g04820;Ontology_term=CC_evidence_code:ISS,GO:0004197,GO:0006508,GO:0008234,CC_EC_number:3.4.22.14,PRODUCT:Oryzain alpha chain,CC_functional_completeness:complete,CC_gene:Os04g0650000,CC_gene:RD21A,CC_gene:Os04g0670200;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034889001~ Oryzain alpha chain~ Os04g0650000~ complete;original_location=complement(join(5297098..5297566%2C5295782..5296017%2C5295551..5295691%2C5294661..5295110%2C5294459..5294560));owner=coffea | |
| 37606 chr10 manual_curation exon 3766642 3767223 . + . Parent=GSCOCT00034889001 | |
| 37607 chr10 manual_curation exon 3766092 3766541 . + . Parent=GSCOCT00034889001 | |
| 37608 chr10 manual_curation exon 3765511 3765651 . + . Parent=GSCOCT00034889001 | |
| 37609 chr10 manual_curation exon 3765185 3765420 . + . Parent=GSCOCT00034889001 | |
| 37610 chr10 manual_curation exon 3763309 3764104 . + . Parent=GSCOCT00034889001 | |
| 37611 chr10 manual_curation CDS 3766642 3766743 . + 0 Parent=GSCOCT00034889001 | |
| 37612 chr10 manual_curation CDS 3766092 3766541 . + 0 Parent=GSCOCT00034889001 | |
| 37613 chr10 manual_curation CDS 3765511 3765651 . + 0 Parent=GSCOCT00034889001 | |
| 37614 chr10 manual_curation CDS 3765185 3765420 . + 1 Parent=GSCOCT00034889001 | |
| 37615 chr10 manual_curation CDS 3763636 3764104 . + 0 Parent=GSCOCT00034889001 | |
| 37616 chr10 manual_curation gene 3770287 3772583 . - . ID=GSCOCG00034888001;Name=Cc10_g04830 | |
| 37617 chr10 manual_curation mRNA 3770287 3772583 . - . ID=GSCOCT00034888001;Parent=GSCOCG00034888001;Name=Cc10_g04830 | |
| 37618 chr10 manual_curation polypeptide 3770523 3772310 . - . ID=GSCOCP00034888001;Dbxref=SwissProt:P0C7P8,SwissProt:Q58G01,TAIR:AT1G60060.1,TAIR:AT3G15240.2,TAIR:AT5G53900.2,TrEMBL:A5B6Y3,TrEMBL:B9R775,TrEMBL:E0CPR5;Derives_from=GSCOCT00034888001;Name=Cc10_g04830;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:EMB1444,CC_gene:BHLH155;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034888001~ Putative uncharacterized protein~ EMB1444~ complete;original_location=join(5288892..5289055%2C5289168..5289221%2C5289305..5289436%2C5289530..5289638%2C5289753..5289794%2C5289870..5289926%2C5290020..5290679);owner=coffea | |
| 37619 chr10 manual_curation exon 3772147 3772583 . - . Parent=GSCOCT00034888001 | |
| 37620 chr10 manual_curation exon 3771981 3772034 . - . Parent=GSCOCT00034888001 | |
| 37621 chr10 manual_curation exon 3771766 3771897 . - . Parent=GSCOCT00034888001 | |
| 37622 chr10 manual_curation exon 3771564 3771672 . - . Parent=GSCOCT00034888001 | |
| 37623 chr10 manual_curation exon 3771408 3771449 . - . Parent=GSCOCT00034888001 | |
| 37624 chr10 manual_curation exon 3771276 3771332 . - . Parent=GSCOCT00034888001 | |
| 37625 chr10 manual_curation exon 3770287 3771182 . - . Parent=GSCOCT00034888001 | |
| 37626 chr10 manual_curation CDS 3772147 3772310 . - 0 Parent=GSCOCT00034888001 | |
| 37627 chr10 manual_curation CDS 3771981 3772034 . - 2 Parent=GSCOCT00034888001 | |
| 37628 chr10 manual_curation CDS 3771766 3771897 . - 2 Parent=GSCOCT00034888001 | |
| 37629 chr10 manual_curation CDS 3771564 3771672 . - 2 Parent=GSCOCT00034888001 | |
| 37630 chr10 manual_curation CDS 3771408 3771449 . - 0 Parent=GSCOCT00034888001 | |
| 37631 chr10 manual_curation CDS 3771276 3771332 . - 0 Parent=GSCOCT00034888001 | |
| 37632 chr10 manual_curation CDS 3770523 3771182 . - 0 Parent=GSCOCT00034888001 | |
| 37633 chr10 manual_curation gene 3775039 3778718 . - . ID=GSCOCG00034887001;Name=Cc10_g04840 | |
| 37634 chr10 manual_curation mRNA 3775039 3778718 . - . ID=GSCOCT00034887001;Parent=GSCOCG00034887001;Name=Cc10_g04840 | |
| 37635 chr10 manual_curation polypeptide 3776474 3778578 . - . ID=GSCOCP00034887001;Dbxref=InterPro:IPR004932,PANTHER:PTHR10743,PFAM:PF03248,PIR:PIRSF016013,SwissProt:O48670,SwissProt:O48671,SwissProt:Q9ZWI7,TAIR:AT2G21600.1,TAIR:AT2G23310.1,TAIR:AT4G39220.1,TrEMBL:B9SFZ5,TrEMBL:D7SVS2,TrEMBL:I1J9A1;Derives_from=GSCOCT00034887001;Name=Cc10_g04840;Ontology_term=CC_evidence_code:ISS,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Protein RER1A,CC_functional_completeness:complete,CC_gene:RER1A,CC_gene:RER1B,CC_gene:RER1C;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034887001~ Protein RER1A~ RER1A~ complete;original_location=join(5282624..5282803%2C5282897..5283006%2C5284365..5284545%2C5284672..5284728);owner=coffea | |
| 37636 chr10 manual_curation exon 3778399 3778718 . - . Parent=GSCOCT00034887001 | |
| 37637 chr10 manual_curation exon 3778196 3778305 . - . Parent=GSCOCT00034887001 | |
| 37638 chr10 manual_curation exon 3776657 3776837 . - . Parent=GSCOCT00034887001 | |
| 37639 chr10 manual_curation exon 3775039 3776530 . - . Parent=GSCOCT00034887001 | |
| 37640 chr10 manual_curation CDS 3778399 3778578 . - 0 Parent=GSCOCT00034887001 | |
| 37641 chr10 manual_curation CDS 3778196 3778305 . - 0 Parent=GSCOCT00034887001 | |
| 37642 chr10 manual_curation CDS 3776657 3776837 . - 2 Parent=GSCOCT00034887001 | |
| 37643 chr10 manual_curation CDS 3776474 3776530 . - 0 Parent=GSCOCT00034887001 | |
| 37644 chr10 manual_curation gene 3783464 3785195 . + . ID=GSCOCG00034885001;Name=Cc10_g04850 | |
| 37645 chr10 manual_curation mRNA 3783464 3785195 . + . ID=GSCOCT00034885001;Parent=GSCOCG00034885001;Name=Cc10_g04850 | |
| 37646 chr10 manual_curation polypeptide 3783642 3784744 . + . ID=GSCOCP00034885001;Derives_from=GSCOCT00034885001;Name=Cc10_g04850;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034885001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(5277503..5277560%2C5276695..5277411%2C5276458..5276597));owner=coffea | |
| 37647 chr10 manual_curation exon 3784605 3785195 . + . Parent=GSCOCT00034885001 | |
| 37648 chr10 manual_curation exon 3783791 3784507 . + . Parent=GSCOCT00034885001 | |
| 37649 chr10 manual_curation exon 3783464 3783699 . + . Parent=GSCOCT00034885001 | |
| 37650 chr10 manual_curation CDS 3784605 3784744 . + 1 Parent=GSCOCT00034885001 | |
| 37651 chr10 manual_curation CDS 3783791 3784507 . + 1 Parent=GSCOCT00034885001 | |
| 37652 chr10 manual_curation CDS 3783642 3783699 . + 0 Parent=GSCOCT00034885001 | |
| 37653 chr10 manual_curation gene 3787145 3791528 . + . ID=GSCOCG00034884001;Name=Cc10_g04860 | |
| 37654 chr10 manual_curation mRNA 3787145 3791528 . + . ID=GSCOCT00034884001;Parent=GSCOCG00034884001;Name=Cc10_g04860 | |
| 37655 chr10 manual_curation polypeptide 3787286 3791144 . + . ID=GSCOCP00034884001;Dbxref=InterPro:IPR006603,InterPro:IPR016817,PIR:PIRSF023381,SMART:SM00679,SwissProt:Q8VY63,SwissProt:Q9LTI3,SwissProt:Q9VMW8,TAIR:AT4G07390.1,TAIR:AT5G59470.1,TrEMBL:A9PEV8,TrEMBL:B9R773,TrEMBL:E5GB83;Derives_from=GSCOCT00034884001;Name=Cc10_g04860;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Mannose-P-dolichol utilization defect 1 protein homolog 2,CC_functional_completeness:complete,CC_gene:At4g07390,CC_gene:At5g59470,CC_gene:CG3792;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034884001~ Mannose-P-dolichol utilization defect 1 protein homolog 2~ At4g07390~ complete;original_location=complement(join(5273761..5273916%2C5272721..5272874%2C5272431..5272503%2C5272258..5272324%2C5272052..5272111%2C5270889..5270949%2C5270756..5270797%2C5270058..5270161));owner=coffea | |
| 37656 chr10 manual_curation exon 3791041 3791528 . + . Parent=GSCOCT00034884001 | |
| 37657 chr10 manual_curation exon 3790405 3790446 . + . Parent=GSCOCT00034884001 | |
| 37658 chr10 manual_curation exon 3790253 3790313 . + . Parent=GSCOCT00034884001 | |
| 37659 chr10 manual_curation exon 3789091 3789150 . + . Parent=GSCOCT00034884001 | |
| 37660 chr10 manual_curation exon 3788878 3788944 . + . Parent=GSCOCT00034884001 | |
| 37661 chr10 manual_curation exon 3788699 3788771 . + . Parent=GSCOCT00034884001 | |
| 37662 chr10 manual_curation exon 3788328 3788481 . + . Parent=GSCOCT00034884001 | |
| 37663 chr10 manual_curation exon 3787145 3787441 . + . Parent=GSCOCT00034884001 | |
| 37664 chr10 manual_curation CDS 3791041 3791144 . + 1 Parent=GSCOCT00034884001 | |
| 37665 chr10 manual_curation CDS 3790405 3790446 . + 1 Parent=GSCOCT00034884001 | |
| 37666 chr10 manual_curation CDS 3790253 3790313 . + 0 Parent=GSCOCT00034884001 | |
| 37667 chr10 manual_curation CDS 3789091 3789150 . + 0 Parent=GSCOCT00034884001 | |
| 37668 chr10 manual_curation CDS 3788878 3788944 . + 2 Parent=GSCOCT00034884001 | |
| 37669 chr10 manual_curation CDS 3788699 3788771 . + 1 Parent=GSCOCT00034884001 | |
| 37670 chr10 manual_curation CDS 3788328 3788481 . + 0 Parent=GSCOCT00034884001 | |
| 37671 chr10 manual_curation CDS 3787286 3787441 . + 0 Parent=GSCOCT00034884001 | |
| 37672 chr10 manual_curation gene 3793009 3795059 . - . ID=GSCOCG00034883001;Name=Cc10_g04870 | |
| 37673 chr10 manual_curation mRNA 3793009 3795059 . - . ID=GSCOCT00034883001;Parent=GSCOCG00034883001;Name=Cc10_g04870 | |
| 37674 chr10 manual_curation polypeptide 3793275 3794912 . - . ID=GSCOCP00034883001;Dbxref=InterPro:IPR001810,InterPro:IPR006553,InterPro:IPR022364,PFAM:PF00646,PROFILE:PS50181,SMART:SM00367,SUPERFAMILY:SSF81383,SwissProt:Q9C626,SwissProt:Q9FE83,SwissProt:Q9S9X4,TAIR:AT1G47056.1,TAIR:AT4G07400.1,TAIR:AT5G67250.1,TrEMBL:B9GNT5,TrEMBL:B9MVV4,TrEMBL:B9R772;Derives_from=GSCOCT00034883001;Name=Cc10_g04870;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative F-box/LRR-repeat protein 8,CC_functional_completeness:complete,CC_gene:FBL8,CC_gene:At1g47056,CC_gene:SKIP2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034883001~ Putative F-box/LRR-repeat protein 8~ FBL8~ complete;original_location=5266290..5267927;owner=coffea | |
| 37675 chr10 manual_curation exon 3793009 3795059 . - . Parent=GSCOCT00034883001 | |
| 37676 chr10 manual_curation CDS 3793275 3794912 . - 0 Parent=GSCOCT00034883001 | |
| 37677 chr10 manual_curation gene 3805602 3809624 . + . ID=GSCOCG00034882001;Name=Cc10_g04880 | |
| 37678 chr10 manual_curation mRNA 3805602 3809624 . + . ID=GSCOCT00034882001;Parent=GSCOCG00034882001;Name=Cc10_g04880 | |
| 37679 chr10 manual_curation polypeptide 3805701 3809169 . + . ID=GSCOCP00034882001;Dbxref=InterPro:IPR021602,PFAM:PF11523,SwissProt:Q42463,SwissProt:Q5D869,TAIR:AT1G45230.1,TAIR:AT2G40030.1,TAIR:AT3G46630.1,TrEMBL:B9MVV5,TrEMBL:B9R769,TrEMBL:E0CPR0;Derives_from=GSCOCT00034882001;Name=Cc10_g04880;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF3223),CC_functional_completeness:complete,CC_gene:DCL,CC_gene:NRPE1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034882001~ Protein of unknown function (DUF3223)~ DCL~ complete;original_location=complement(join(5255182..5255501%2C5253948..5254062%2C5252033..5252203));owner=coffea | |
| 37680 chr10 manual_curation exon 3808999 3809624 . + . Parent=GSCOCT00034882001 | |
| 37681 chr10 manual_curation exon 3807140 3807254 . + . Parent=GSCOCT00034882001 | |
| 37682 chr10 manual_curation exon 3805602 3806020 . + . Parent=GSCOCT00034882001 | |
| 37683 chr10 manual_curation CDS 3808999 3809169 . + 0 Parent=GSCOCT00034882001 | |
| 37684 chr10 manual_curation CDS 3807140 3807254 . + 2 Parent=GSCOCT00034882001 | |
| 37685 chr10 manual_curation CDS 3805701 3806020 . + 0 Parent=GSCOCT00034882001 | |
| 37686 chr10 manual_curation gene 3829170 3831279 . + . ID=GSCOCG00034880001;Name=Cc10_g04890 | |
| 37687 chr10 manual_curation mRNA 3829170 3831279 . + . ID=GSCOCT00034880001;Parent=GSCOCG00034880001;Name=Cc10_g04890 | |
| 37688 chr10 manual_curation polypeptide 3829338 3830841 . + . ID=GSCOCP00034880001;Dbxref=GENE3D:G3DSA:1.10.472.10,InterPro:IPR004367,InterPro:IPR006670,InterPro:IPR006671,InterPro:IPR011028,InterPro:IPR013763,InterPro:IPR015451,PANTHER:PTHR10177:SF12,PFAM:PF00134,PFAM:PF02984,PROSITE:PS00292,SMART:SM00385,SUPERFAMILY:SSF47954,SwissProt:P42753,SwissProt:Q9FGQ7,SwissProt:Q9SN11,TAIR:AT3G50070.1,TAIR:AT4G34160.1,TAIR:AT5G67260.1,TrEMBL:B9R768,TrEMBL:E0CPQ9,TrEMBL:Q2ABE7;Derives_from=GSCOCT00034880001;Name=Cc10_g04890;Ontology_term=CC_evidence_code:ISS,GO:0005634,CC_EC_number:missing_EC_number,PRODUCT:Putative Cyclin-D3-2,CC_functional_completeness:complete,CC_gene:CYCD3-1,CC_gene:CYCD3-2,CC_gene:CYCD3-3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034880001~ Putative Cyclin-D3-2~ CYCD3-1~ complete;original_location=complement(join(5231331..5231864%2C5231016..5231217%2C5230787..5230917%2C5230361..5230666));owner=coffea | |
| 37689 chr10 manual_curation exon 3830536 3831279 . + . Parent=GSCOCT00034880001 | |
| 37690 chr10 manual_curation exon 3830285 3830415 . + . Parent=GSCOCT00034880001 | |
| 37691 chr10 manual_curation exon 3829985 3830186 . + . Parent=GSCOCT00034880001 | |
| 37692 chr10 manual_curation exon 3829170 3829871 . + . Parent=GSCOCT00034880001 | |
| 37693 chr10 manual_curation CDS 3830536 3830841 . + 0 Parent=GSCOCT00034880001 | |
| 37694 chr10 manual_curation CDS 3830285 3830415 . + 1 Parent=GSCOCT00034880001 | |
| 37695 chr10 manual_curation CDS 3829985 3830186 . + 0 Parent=GSCOCT00034880001 | |
| 37696 chr10 manual_curation CDS 3829338 3829871 . + 0 Parent=GSCOCT00034880001 | |
| 37697 chr10 manual_curation gene 3850325 3853214 . + . ID=GSCOCG00034879001;Name=Cc10_g04900 | |
| 37698 chr10 manual_curation mRNA 3850325 3853214 . + . ID=GSCOCT00034879001;Parent=GSCOCG00034879001;Name=Cc10_g04900 | |
| 37699 chr10 manual_curation polypeptide 3850444 3852347 . + . ID=GSCOCP00034879001;Dbxref=InterPro:IPR000246,PANTHER:PTHR10188,PFAM:PF01112,SwissProt:P30364,SwissProt:Q8GXG1,SwissProt:Q9ZSD6,TAIR:AT3G16150.1,TAIR:AT4G00590.1,TAIR:AT5G08100.1,TrEMBL:A5C3M5,TrEMBL:B9MVV9,TrEMBL:I1M8R0;Derives_from=GSCOCT00034879001;Name=Cc10_g04900;Ontology_term=CC_evidence_code:ISS,GO:0016787,CC_EC_number:3.5.1.1,PRODUCT:Probable isoaspartyl peptidase/L-asparaginase 2,CC_functional_completeness:complete,CC_gene:At3g16150;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034879001~ Probable isoaspartyl peptidase/L-asparaginase 2~ At3g16150~ complete;original_location=complement(join(5210597..5210758%2C5210000..5210233%2C5209458..5209544%2C5208855..5209349));owner=coffea | |
| 37700 chr10 manual_curation exon 3851853 3853214 . + . Parent=GSCOCT00034879001 | |
| 37701 chr10 manual_curation exon 3851658 3851744 . + . Parent=GSCOCT00034879001 | |
| 37702 chr10 manual_curation exon 3850969 3851202 . + . Parent=GSCOCT00034879001 | |
| 37703 chr10 manual_curation exon 3850325 3850605 . + . Parent=GSCOCT00034879001 | |
| 37704 chr10 manual_curation CDS 3851853 3852347 . + 0 Parent=GSCOCT00034879001 | |
| 37705 chr10 manual_curation CDS 3851658 3851744 . + 0 Parent=GSCOCT00034879001 | |
| 37706 chr10 manual_curation CDS 3850969 3851202 . + 0 Parent=GSCOCT00034879001 | |
| 37707 chr10 manual_curation CDS 3850444 3850605 . + 0 Parent=GSCOCT00034879001 | |
| 37708 chr10 manual_curation gene 3865147 3868097 . - . ID=GSCOCG00034877001;Name=Cc10_g04910 | |
| 37709 chr10 manual_curation mRNA 3865147 3868097 . - . ID=GSCOCT00034877001;Parent=GSCOCG00034877001;Name=Cc10_g04910 | |
| 37710 chr10 manual_curation polypeptide 3865315 3866554 . - . ID=GSCOCP00034877001;Dbxref=InterPro:IPR005181,PFAM:PF03629,SwissProt:Q8L9J9,TAIR:AT3G53010.1,TAIR:AT4G34215.1,TrEMBL:B9MVW2,TrEMBL:B9R763,TrEMBL:F6GZY1;Derives_from=GSCOCT00034877001;Name=Cc10_g04910;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Probable carbohydrate esterase At4g34215,CC_functional_completeness:complete,CC_gene:At4g34215;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034877001~ Probable carbohydrate esterase At4g34215~ At4g34215~ complete;original_location=join(5194648..5195124%2C5195612..5195887);owner=coffea | |
| 37711 chr10 manual_curation exon 3866078 3868097 . - . Parent=GSCOCT00034877001 | |
| 37712 chr10 manual_curation exon 3865147 3865590 . - . Parent=GSCOCT00034877001 | |
| 37713 chr10 manual_curation CDS 3866078 3866554 . - 0 Parent=GSCOCT00034877001 | |
| 37714 chr10 manual_curation CDS 3865315 3865590 . - 0 Parent=GSCOCT00034877001 | |
| 37715 chr10 manual_curation gene 3869396 3871786 . + . ID=GSCOCG00034876001;Name=Cc10_g04920 | |
| 37716 chr10 manual_curation mRNA 3869396 3871786 . + . ID=GSCOCT00034876001;Parent=GSCOCG00034876001;Name=Cc10_g04920 | |
| 37717 chr10 manual_curation polypeptide 3869396 3871786 . + . ID=GSCOCP00034876001;Dbxref=InterPro:IPR000719,InterPro:IPR000858,InterPro:IPR001480,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00954,PFAM:PF01453,PROFILE:PS50011,PROFILE:PS50927,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF51110,SUPERFAMILY:SSF56112,SwissProt:P17801,SwissProt:Q9FLV4,SwissProt:Q9XID3,TAIR:AT1G34300.1,TAIR:AT4G00340.1,TAIR:AT5G35370.1,TrEMBL:B9I816,TrEMBL:B9I819,TrEMBL:F6GZX1;Derives_from=GSCOCT00034876001;Name=Cc10_g04920;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0005529,GO:0006468,GO:0048544,CC_EC_number:2.7.11.25,PRODUCT:Putative receptor protein kinase ZmPK1,CC_functional_completeness:complete,CC_gene:PK1,CC_gene:At5g24080,CC_gene:At1g34300;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034876001~ Putative receptor protein kinase ZmPK1~ PK1~ complete;original_location=complement(5189416..5191806);owner=coffea | |
| 37718 chr10 manual_curation exon 3869396 3871786 . + . Parent=GSCOCT00034876001 | |
| 37719 chr10 manual_curation CDS 3869396 3871786 . + 0 Parent=GSCOCT00034876001 | |
| 37720 chr10 manual_curation gene 3873075 3873891 . - . ID=GSCOCG00034875001;Name=Cc10_g04930 | |
| 37721 chr10 manual_curation mRNA 3873075 3873891 . - . ID=GSCOCT00034875001;Parent=GSCOCG00034875001;Name=Cc10_g04930 | |
| 37722 chr10 manual_curation polypeptide 3873075 3873891 . - . ID=GSCOCP00034875001;Dbxref=InterPro:IPR005181,PFAM:PF03629,SwissProt:Q8L9J9,TAIR:AT3G53010.1,TAIR:AT4G34215.1,TrEMBL:B9MVW2,TrEMBL:B9R763,TrEMBL:F6GZY1;Derives_from=GSCOCT00034875001;Name=Cc10_g04930;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Probable carbohydrate esterase At4g34215,CC_functional_completeness:complete,CC_gene:At4g34215;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034875001~ Probable carbohydrate esterase At4g34215~ At4g34215~ complete;original_location=join(5187311..5187784%2C5187897..5188127);owner=coffea | |
| 37723 chr10 manual_curation exon 3873418 3873891 . - . Parent=GSCOCT00034875001 | |
| 37724 chr10 manual_curation exon 3873075 3873305 . - . Parent=GSCOCT00034875001 | |
| 37725 chr10 manual_curation CDS 3873418 3873891 . - 0 Parent=GSCOCT00034875001 | |
| 37726 chr10 manual_curation CDS 3873075 3873305 . - 0 Parent=GSCOCT00034875001 | |
| 37727 chr10 manual_curation gene 3883907 3885360 . + . ID=GSCOCG00034874001;Name=Cc10_g04940 | |
| 37728 chr10 manual_curation mRNA 3883907 3885360 . + . ID=GSCOCT00034874001;Parent=GSCOCG00034874001;Name=Cc10_g04940 | |
| 37729 chr10 manual_curation polypeptide 3883907 3884980 . + . ID=GSCOCP00034874001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001005,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR014778,InterPro:IPR015495,InterPro:IPR017930,PANTHER:PTHR10641,PFAM:PF00249,PROFILE:PS51294,SMART:SM00717,SUPERFAMILY:SSF46689,SwissProt:P10242,SwissProt:P52551,SwissProt:Q9FDW1,TAIR:AT2G23290.1,TAIR:AT4G37260.1,TAIR:AT5G67300.1,TrEMBL:F6HSY7,TrEMBL:Q1XAN1,TrEMBL:Q8H0H0;Derives_from=GSCOCT00034874001;Name=Cc10_g04940;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative Transcription factor MYB44,CC_functional_completeness:complete,CC_gene:MYB44,CC_gene:mybl2,CC_gene:MYB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034874001~ Putative Transcription factor MYB44~ MYB44~ complete;original_location=complement(join(5176637..5177295%2C5176222..5176561));owner=coffea | |
| 37730 chr10 manual_curation exon 3884641 3885360 . + . Parent=GSCOCT00034874001 | |
| 37731 chr10 manual_curation exon 3883907 3884565 . + . Parent=GSCOCT00034874001 | |
| 37732 chr10 manual_curation CDS 3884641 3884980 . + 2 Parent=GSCOCT00034874001 | |
| 37733 chr10 manual_curation CDS 3883907 3884565 . + 0 Parent=GSCOCT00034874001 | |
| 37734 chr10 manual_curation gene 3902415 3903472 . + . ID=GSCOCG00034871001;Name=Cc10_g04950 | |
| 37735 chr10 manual_curation mRNA 3902415 3903472 . + . ID=GSCOCT00034871001;Parent=GSCOCG00034871001;Name=Cc10_g04950 | |
| 37736 chr10 manual_curation polypeptide 3902415 3903472 . + . ID=GSCOCP00034871001;Derives_from=GSCOCT00034871001;Name=Cc10_g04950;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034871001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(5158766..5158787%2C5158428..5158460%2C5157730..5157815));owner=coffea | |
| 37737 chr10 manual_curation exon 3903387 3903472 . + . Parent=GSCOCT00034871001 | |
| 37738 chr10 manual_curation exon 3902742 3902774 . + . Parent=GSCOCT00034871001 | |
| 37739 chr10 manual_curation exon 3902415 3902436 . + . Parent=GSCOCT00034871001 | |
| 37740 chr10 manual_curation CDS 3903387 3903472 . + 1 Parent=GSCOCT00034871001 | |
| 37741 chr10 manual_curation CDS 3902742 3902774 . + 1 Parent=GSCOCT00034871001 | |
| 37742 chr10 manual_curation CDS 3902415 3902436 . + 0 Parent=GSCOCT00034871001 | |
| 37743 chr10 manual_curation gene 3904848 3908317 . + . ID=GSCOCG00034869001;Name=Cc10_g04960 | |
| 37744 chr10 manual_curation mRNA 3904848 3908317 . + . ID=GSCOCT00034869001;Parent=GSCOCG00034869001;Name=Cc10_g04960 | |
| 37745 chr10 manual_curation polypeptide 3904848 3908317 . + . ID=GSCOCP00034869001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR002085,InterPro:IPR011032,InterPro:IPR013149,InterPro:IPR013154,InterPro:IPR014189,InterPro:IPR016040,InterPro:IPR020843,PANTHER:PTHR11695,PANTHER:PTHR11695:SF28,PFAM:PF00107,PFAM:PF08240,SMART:SM00829,SUPERFAMILY:SSF50129,SwissProt:O97764,SwissProt:P47199,SwissProt:Q53FA7,TAIR:AT1G49670.2,TAIR:AT4G21580.1,TAIR:AT5G61510.1,TIGRFAMs:TIGR02824,TrEMBL:B4FFA1,TrEMBL:C6TID4,TrEMBL:G7ILE5;Derives_from=GSCOCT00034869001;Name=Cc10_g04960;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,GO:0008270,GO:0016491,GO:0055114,CC_EC_number:1.6.5.5,PRODUCT:Putative Quinone oxidoreductase PIG3,CC_functional_completeness:complete,CC_gene:TP53I3,CC_gene:CRYZ,CC_gene:Cryz;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034869001~ Putative Quinone oxidoreductase PIG3~ TP53I3~ complete;original_location=complement(join(5156106..5156354%2C5155052..5155231%2C5154877..5154958%2C5154480..5154587%2C5153198..5153359%2C5152885..5153111));owner=coffea | |
| 37746 chr10 manual_curation exon 3908091 3908317 . + . Parent=GSCOCT00034869001 | |
| 37747 chr10 manual_curation exon 3907843 3908004 . + . Parent=GSCOCT00034869001 | |
| 37748 chr10 manual_curation exon 3906615 3906722 . + . Parent=GSCOCT00034869001 | |
| 37749 chr10 manual_curation exon 3906244 3906325 . + . Parent=GSCOCT00034869001 | |
| 37750 chr10 manual_curation exon 3905971 3906150 . + . Parent=GSCOCT00034869001 | |
| 37751 chr10 manual_curation exon 3904848 3905096 . + . Parent=GSCOCT00034869001 | |
| 37752 chr10 manual_curation CDS 3908091 3908317 . + 1 Parent=GSCOCT00034869001 | |
| 37753 chr10 manual_curation CDS 3907843 3908004 . + 1 Parent=GSCOCT00034869001 | |
| 37754 chr10 manual_curation CDS 3906615 3906722 . + 1 Parent=GSCOCT00034869001 | |
| 37755 chr10 manual_curation CDS 3906244 3906325 . + 0 Parent=GSCOCT00034869001 | |
| 37756 chr10 manual_curation CDS 3905971 3906150 . + 0 Parent=GSCOCT00034869001 | |
| 37757 chr10 manual_curation CDS 3904848 3905096 . + 0 Parent=GSCOCT00034869001 | |
| 37758 chr10 manual_curation gene 3915162 3917562 . + . ID=GSCOCG00034868001;Name=Cc10_g04970 | |
| 37759 chr10 manual_curation mRNA 3915162 3917562 . + . ID=GSCOCT00034868001;Parent=GSCOCG00034868001;Name=Cc10_g04970 | |
| 37760 chr10 manual_curation polypeptide 3915162 3917562 . + . ID=GSCOCP00034868001;Dbxref=InterPro:IPR002085,InterPro:IPR011032,InterPro:IPR013149,InterPro:IPR013154,InterPro:IPR014189,InterPro:IPR020843,PANTHER:PTHR11695,PANTHER:PTHR11695:SF28,PFAM:PF00107,PFAM:PF08240,SMART:SM00829,SUPERFAMILY:SSF50129,SwissProt:O97764,SwissProt:Q08257,SwissProt:Q0MVN8,TAIR:AT4G21580.1,TAIR:AT5G61510.1,TrEMBL:B9H236,TrEMBL:B9S608,TrEMBL:Q3HVL5;Derives_from=GSCOCT00034868001;Name=Cc10_g04970;Ontology_term=CC_evidence_code:ISS,GO:0008270,GO:0016491,GO:0055114,CC_EC_number:1.6.5.5,PRODUCT:Putative Zeta-crystallin,CC_functional_completeness:fragment,CC_gene:CRYZ;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034868001~ Putative Zeta-crystallin~ CRYZ~ fragment;original_location=complement(join(5145789..5146040%2C5144896..5145072%2C5144427..5144508%2C5144211..5144318%2C5143640..5143959));owner=coffea | |
| 37761 chr10 manual_curation exon 3917243 3917562 . + . Parent=GSCOCT00034868001 | |
| 37762 chr10 manual_curation exon 3916884 3916991 . + . Parent=GSCOCT00034868001 | |
| 37763 chr10 manual_curation exon 3916694 3916775 . + . Parent=GSCOCT00034868001 | |
| 37764 chr10 manual_curation exon 3916130 3916306 . + . Parent=GSCOCT00034868001 | |
| 37765 chr10 manual_curation exon 3915162 3915413 . + . Parent=GSCOCT00034868001 | |
| 37766 chr10 manual_curation CDS 3917243 3917562 . + 1 Parent=GSCOCT00034868001 | |
| 37767 chr10 manual_curation CDS 3916884 3916991 . + 1 Parent=GSCOCT00034868001 | |
| 37768 chr10 manual_curation CDS 3916694 3916775 . + 0 Parent=GSCOCT00034868001 | |
| 37769 chr10 manual_curation CDS 3916130 3916306 . + 0 Parent=GSCOCT00034868001 | |
| 37770 chr10 manual_curation CDS 3915162 3915413 . + 0 Parent=GSCOCT00034868001 | |
| 37771 chr10 manual_curation gene 3926520 3928919 . - . ID=GSCOCG00034866001;Name=Cc10_g04980 | |
| 37772 chr10 manual_curation mRNA 3926520 3928919 . - . ID=GSCOCT00034866001;Parent=GSCOCG00034866001;Name=Cc10_g04980 | |
| 37773 chr10 manual_curation polypeptide 3926520 3928919 . - . ID=GSCOCP00034866001;Dbxref=InterPro:IPR000719,InterPro:IPR001480,InterPro:IPR002290,InterPro:IPR003609,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF01453,PROFILE:PS50011,PROFILE:PS50927,PROFILE:PS50948,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF51110,SUPERFAMILY:SSF56112,SwissProt:O64477,SwissProt:P17801,SwissProt:Q9FLV4,TAIR:AT2G19130.1,TAIR:AT4G00340.1,TAIR:AT5G60900.1,TrEMBL:B9I816,TrEMBL:B9I819,TrEMBL:F6GZX6;Derives_from=GSCOCT00034866001;Name=Cc10_g04980;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0005529,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative receptor protein kinase ZmPK1,CC_functional_completeness:complete,CC_gene:PK1,CC_gene:At2g19130,CC_gene:At5g24080;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034866001~ Putative receptor protein kinase ZmPK1~ PK1~ complete;original_location=join(5132283..5133110%2C5133192..5133583%2C5133743..5134437%2C5134534..5134682);owner=coffea | |
| 37774 chr10 manual_curation exon 3928092 3928919 . - . Parent=GSCOCT00034866001 | |
| 37775 chr10 manual_curation exon 3927619 3928010 . - . Parent=GSCOCT00034866001 | |
| 37776 chr10 manual_curation exon 3926765 3927459 . - . Parent=GSCOCT00034866001 | |
| 37777 chr10 manual_curation exon 3926520 3926668 . - . Parent=GSCOCT00034866001 | |
| 37778 chr10 manual_curation CDS 3928092 3928919 . - 0 Parent=GSCOCT00034866001 | |
| 37779 chr10 manual_curation CDS 3927619 3928010 . - 0 Parent=GSCOCT00034866001 | |
| 37780 chr10 manual_curation CDS 3926765 3927459 . - 2 Parent=GSCOCT00034866001 | |
| 37781 chr10 manual_curation CDS 3926520 3926668 . - 1 Parent=GSCOCT00034866001 | |
| 37782 chr10 manual_curation gene 3933044 3934045 . - . ID=GSCOCG00034865001;Name=Cc10_g04990 | |
| 37783 chr10 manual_curation mRNA 3933044 3934045 . - . ID=GSCOCT00034865001;Parent=GSCOCG00034865001;Name=Cc10_g04990 | |
| 37784 chr10 manual_curation polypeptide 3933118 3933924 . - . ID=GSCOCP00034865001;Dbxref=TAIR:AT1G10220.1,TAIR:AT1G59590.1,TrEMBL:B9IBR1,TrEMBL:B9R6Z7,TrEMBL:F6H198;Derives_from=GSCOCT00034865001;Name=Cc10_g04990;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative ZCF37,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034865001~ Putative ZCF37~ unknown_gene~ modules;original_location=5127278..5128084;owner=coffea | |
| 37785 chr10 manual_curation exon 3933044 3934045 . - . Parent=GSCOCT00034865001 | |
| 37786 chr10 manual_curation CDS 3933118 3933924 . - 0 Parent=GSCOCT00034865001 | |
| 37787 chr10 manual_curation gene 3940612 3944713 . - . ID=GSCOCG00034864001;Name=Cc10_g05000 | |
| 37788 chr10 manual_curation mRNA 3940612 3944713 . - . ID=GSCOCT00034864001;Parent=GSCOCG00034864001;Name=Cc10_g05000 | |
| 37789 chr10 manual_curation polypeptide 3941683 3944510 . - . ID=GSCOCP00034864001;Dbxref=InterPro:IPR004130,PFAM:PF03029,SwissProt:Q4R579,SwissProt:Q58DD9,SwissProt:Q8VEJ1,TAIR:AT4G12790.1,TAIR:AT4G21800.1,TAIR:AT5G22370.1,TrEMBL:B9R6Z6,TrEMBL:E0CP19;Derives_from=GSCOCT00034864001;Name=Cc10_g05000;Ontology_term=CC_evidence_code:ISS,GO:0000166,CC_EC_number:missing_EC_number,PRODUCT:GPN-loop GTPase 2,CC_functional_completeness:complete,CC_gene:GPN2,CC_gene:Gpn2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034864001~ GPN-loop GTPase 2~ GPN2~ complete;original_location=join(5116692..5116783%2C5117089..5117133%2C5117261..5117340%2C5117591..5117665%2C5118153..5118256%2C5118390..5118546%2C5118638..5118725%2C5119217..5119289%2C5119373..5119519);owner=coffea | |
| 37790 chr10 manual_curation exon 3944419 3944713 . - . Parent=GSCOCT00034864001 | |
| 37791 chr10 manual_curation exon 3944069 3944113 . - . Parent=GSCOCT00034864001 | |
| 37792 chr10 manual_curation exon 3943862 3943941 . - . Parent=GSCOCT00034864001 | |
| 37793 chr10 manual_curation exon 3943537 3943611 . - . Parent=GSCOCT00034864001 | |
| 37794 chr10 manual_curation exon 3942946 3943049 . - . Parent=GSCOCT00034864001 | |
| 37795 chr10 manual_curation exon 3942656 3942812 . - . Parent=GSCOCT00034864001 | |
| 37796 chr10 manual_curation exon 3942477 3942564 . - . Parent=GSCOCT00034864001 | |
| 37797 chr10 manual_curation exon 3941913 3941985 . - . Parent=GSCOCT00034864001 | |
| 37798 chr10 manual_curation exon 3940612 3941829 . - . Parent=GSCOCT00034864001 | |
| 37799 chr10 manual_curation CDS 3944419 3944510 . - 0 Parent=GSCOCT00034864001 | |
| 37800 chr10 manual_curation CDS 3944069 3944113 . - 2 Parent=GSCOCT00034864001 | |
| 37801 chr10 manual_curation CDS 3943862 3943941 . - 2 Parent=GSCOCT00034864001 | |
| 37802 chr10 manual_curation CDS 3943537 3943611 . - 1 Parent=GSCOCT00034864001 | |
| 37803 chr10 manual_curation CDS 3942946 3943049 . - 1 Parent=GSCOCT00034864001 | |
| 37804 chr10 manual_curation CDS 3942656 3942812 . - 0 Parent=GSCOCT00034864001 | |
| 37805 chr10 manual_curation CDS 3942477 3942564 . - 1 Parent=GSCOCT00034864001 | |
| 37806 chr10 manual_curation CDS 3941913 3941985 . - 2 Parent=GSCOCT00034864001 | |
| 37807 chr10 manual_curation CDS 3941683 3941829 . - 0 Parent=GSCOCT00034864001 | |
| 37808 chr10 manual_curation gene 3949647 3951536 . + . ID=GSCOCG00034863001;Name=Cc10_g05010 | |
| 37809 chr10 manual_curation mRNA 3949647 3951536 . + . ID=GSCOCT00034863001;Parent=GSCOCG00034863001;Name=Cc10_g05010 | |
| 37810 chr10 manual_curation polypeptide 3949852 3951292 . + . ID=GSCOCP00034863001;Dbxref=GENE3D:G3DSA:2.10.110.10,InterPro:IPR001781,PFAM:PF00412,PROFILE:PS50023,PROSITE:PS00478,SMART:SM00132,SwissProt:P29675,SwissProt:Q0VFX8,SwissProt:Q4U4S6,TAIR:AT1G10200.1,TAIR:AT2G39900.1,TAIR:AT2G45800.1,TrEMBL:A5BYE7,TrEMBL:Q8SBC6,TrEMBL:Q9SP54;Derives_from=GSCOCT00034863001;Name=Cc10_g05010;Ontology_term=CC_evidence_code:ISS,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Pollen-specific protein SF3,CC_functional_completeness:fragment,CC_gene:SF3,CC_gene:Xirp2,CC_gene:CRIP2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034863001~ Pollen-specific protein SF3~ SF3~ fragment;original_location=complement(join(5111216..5111350%2C5110599..5110695%2C5110476..5110519%2C5110291..5110380%2C5109910..5110125));owner=coffea | |
| 37811 chr10 manual_curation exon 3951077 3951536 . + . Parent=GSCOCT00034863001 | |
| 37812 chr10 manual_curation exon 3950822 3950911 . + . Parent=GSCOCT00034863001 | |
| 37813 chr10 manual_curation exon 3950683 3950726 . + . Parent=GSCOCT00034863001 | |
| 37814 chr10 manual_curation exon 3950507 3950603 . + . Parent=GSCOCT00034863001 | |
| 37815 chr10 manual_curation exon 3949647 3949986 . + . Parent=GSCOCT00034863001 | |
| 37816 chr10 manual_curation CDS 3951077 3951292 . + 0 Parent=GSCOCT00034863001 | |
| 37817 chr10 manual_curation CDS 3950822 3950911 . + 0 Parent=GSCOCT00034863001 | |
| 37818 chr10 manual_curation CDS 3950683 3950726 . + 1 Parent=GSCOCT00034863001 | |
| 37819 chr10 manual_curation CDS 3950507 3950603 . + 0 Parent=GSCOCT00034863001 | |
| 37820 chr10 manual_curation CDS 3949852 3949986 . + 0 Parent=GSCOCT00034863001 | |
| 37821 chr10 manual_curation gene 3952325 3955055 . - . ID=GSCOCG00034862001;Name=Cc10_g05020 | |
| 37822 chr10 manual_curation mRNA 3952325 3955055 . - . ID=GSCOCT00034862001;Parent=GSCOCG00034862001;Name=Cc10_g05020 | |
| 37823 chr10 manual_curation polypeptide 3952482 3954158 . - . ID=GSCOCP00034862001;Dbxref=SwissProt:Q84WW1,TAIR:AT3G12350.1,TrEMBL:A5BYE6,TrEMBL:B9R6Z4,TrEMBL:F6H197;Derives_from=GSCOCT00034862001;Name=Cc10_g05020;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative F-box protein At3g12350,CC_functional_completeness:fragment,CC_gene:At3g12350;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034862001~ Putative F-box protein At3g12350~ At3g12350~ fragment;original_location=join(5107044..5107394%2C5108256..5108720);owner=coffea | |
| 37824 chr10 manual_curation exon 3953808 3955055 . - . Parent=GSCOCT00034862001 | |
| 37825 chr10 manual_curation exon 3952325 3952946 . - . Parent=GSCOCT00034862001 | |
| 37826 chr10 manual_curation CDS 3953808 3954158 . - 0 Parent=GSCOCT00034862001 | |
| 37827 chr10 manual_curation CDS 3952482 3952946 . - 0 Parent=GSCOCT00034862001 | |
| 37828 chr10 manual_curation gene 3956762 3959612 . - . ID=GSCOCG00034861001;Name=Cc10_g05030 | |
| 37829 chr10 manual_curation mRNA 3956762 3959612 . - . ID=GSCOCT00034861001;Parent=GSCOCG00034861001;Name=Cc10_g05030 | |
| 37830 chr10 manual_curation polypeptide 3956762 3959612 . - . ID=GSCOCP00034861001;Dbxref=InterPro:IPR004140,PANTHER:PTHR12542,PFAM:PF03081,SwissProt:O54922,TAIR:AT1G51640.1,TAIR:AT4G31540.1,TAIR:AT5G03540.3,TrEMBL:A5BYE5,TrEMBL:B9IBQ8,TrEMBL:E0CP16;Derives_from=GSCOCT00034861001;Name=Cc10_g05030;Ontology_term=CC_evidence_code:ISS,GO:0000145,GO:0006887,CC_EC_number:missing_EC_number,PRODUCT:Putative exocyst subunit exo70 family protein G1,CC_functional_completeness:complete,CC_gene:Exoc7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034861001~ Putative exocyst subunit exo70 family protein G1~ Exoc7~ complete;original_location=join(5101590..5102366%2C5103046..5104294%2C5104382..5104440);owner=coffea | |
| 37831 chr10 manual_curation exon 3958836 3959612 . - . Parent=GSCOCT00034861001 | |
| 37832 chr10 manual_curation exon 3956908 3958156 . - . Parent=GSCOCT00034861001 | |
| 37833 chr10 manual_curation exon 3956762 3956820 . - . Parent=GSCOCT00034861001 | |
| 37834 chr10 manual_curation CDS 3958836 3959612 . - 0 Parent=GSCOCT00034861001 | |
| 37835 chr10 manual_curation CDS 3956908 3958156 . - 0 Parent=GSCOCT00034861001 | |
| 37836 chr10 manual_curation CDS 3956762 3956820 . - 1 Parent=GSCOCT00034861001 | |
| 37837 chr10 manual_curation gene 3966483 3966890 . + . ID=GSCOCG00034860001;Name=Cc10_g05040 | |
| 37838 chr10 manual_curation mRNA 3966483 3966890 . + . ID=GSCOCT00034860001;Parent=GSCOCG00034860001;Name=Cc10_g05040 | |
| 37839 chr10 manual_curation polypeptide 3966483 3966890 . + . ID=GSCOCP00034860001;Dbxref=TrEMBL:A5C0N4,TrEMBL:F6H188,TrEMBL:I1K875;Derives_from=GSCOCT00034860001;Name=Cc10_g05040;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034860001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=complement(5094312..5094719);owner=coffea | |
| 37840 chr10 manual_curation exon 3966483 3966890 . + . Parent=GSCOCT00034860001 | |
| 37841 chr10 manual_curation CDS 3966483 3966890 . + 0 Parent=GSCOCT00034860001 | |
| 37842 chr10 manual_curation gene 3967010 3967645 . + . ID=GSCOCG00034859001;Name=Cc10_g05050 | |
| 37843 chr10 manual_curation mRNA 3967010 3967645 . + . ID=GSCOCT00034859001;Parent=GSCOCG00034859001;Name=Cc10_g05050 | |
| 37844 chr10 manual_curation polypeptide 3967010 3967321 . + . ID=GSCOCP00034859001;Derives_from=GSCOCT00034859001;Name=Cc10_g05050;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034859001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(5094073..5094192%2C5093881..5093946));owner=coffea | |
| 37845 chr10 manual_curation exon 3967256 3967645 . + . Parent=GSCOCT00034859001 | |
| 37846 chr10 manual_curation exon 3967010 3967129 . + . Parent=GSCOCT00034859001 | |
| 37847 chr10 manual_curation CDS 3967256 3967321 . + 0 Parent=GSCOCT00034859001 | |
| 37848 chr10 manual_curation CDS 3967010 3967129 . + 0 Parent=GSCOCT00034859001 | |
| 37849 chr10 manual_curation gene 3974745 3981496 . - . ID=GSCOCG00034858001;Name=Cc10_g05060 | |
| 37850 chr10 manual_curation mRNA 3974745 3981496 . - . ID=GSCOCT00034858001;Parent=GSCOCG00034858001;Name=Cc10_g05060 | |
| 37851 chr10 manual_curation polypeptide 3975178 3981324 . - . ID=GSCOCP00034858001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR011046,InterPro:IPR011047,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019781,InterPro:IPR019782,PFAM:PF00400,PROFILE:PS50082,PROFILE:PS50294,SMART:SM00320,SUPERFAMILY:SSF50978,SUPERFAMILY:SSF50998,SwissProt:O60161,SwissProt:Q8R2N2,SwissProt:Q969X6,TAIR:AT1G27470.1,TAIR:AT4G07410.1,TrEMBL:B9GNN7,TrEMBL:B9IBQ2,TrEMBL:F6H187;Derives_from=GSCOCT00034858001;Name=Cc10_g05060;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Cirhin,CC_functional_completeness:complete,CC_gene:Cirh1a,CC_gene:CIRH1A,CC_gene:utp4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034858001~ Putative Cirhin~ Cirh1a~ complete;original_location=join(5079878..5080039%2C5080137..5080280%2C5080985..5081297%2C5081382..5081445%2C5081596..5081709%2C5081824..5081986%2C5082719..5082836%2C5082988..5083586%2C5084662..5084843%2C5085096..5085356%2C5085721..5086024);owner=coffea | |
| 37852 chr10 manual_curation exon 3981163 3981496 . - . Parent=GSCOCT00034858001 | |
| 37853 chr10 manual_curation exon 3980922 3981065 . - . Parent=GSCOCT00034858001 | |
| 37854 chr10 manual_curation exon 3979905 3980217 . - . Parent=GSCOCT00034858001 | |
| 37855 chr10 manual_curation exon 3979757 3979820 . - . Parent=GSCOCT00034858001 | |
| 37856 chr10 manual_curation exon 3979493 3979606 . - . Parent=GSCOCT00034858001 | |
| 37857 chr10 manual_curation exon 3979216 3979378 . - . Parent=GSCOCT00034858001 | |
| 37858 chr10 manual_curation exon 3978366 3978483 . - . Parent=GSCOCT00034858001 | |
| 37859 chr10 manual_curation exon 3977616 3978214 . - . Parent=GSCOCT00034858001 | |
| 37860 chr10 manual_curation exon 3976359 3976540 . - . Parent=GSCOCT00034858001 | |
| 37861 chr10 manual_curation exon 3975846 3976106 . - . Parent=GSCOCT00034858001 | |
| 37862 chr10 manual_curation exon 3974745 3975481 . - . Parent=GSCOCT00034858001 | |
| 37863 chr10 manual_curation CDS 3981163 3981324 . - 0 Parent=GSCOCT00034858001 | |
| 37864 chr10 manual_curation CDS 3980922 3981065 . - 0 Parent=GSCOCT00034858001 | |
| 37865 chr10 manual_curation CDS 3979905 3980217 . - 0 Parent=GSCOCT00034858001 | |
| 37866 chr10 manual_curation CDS 3979757 3979820 . - 1 Parent=GSCOCT00034858001 | |
| 37867 chr10 manual_curation CDS 3979493 3979606 . - 2 Parent=GSCOCT00034858001 | |
| 37868 chr10 manual_curation CDS 3979216 3979378 . - 2 Parent=GSCOCT00034858001 | |
| 37869 chr10 manual_curation CDS 3978366 3978483 . - 0 Parent=GSCOCT00034858001 | |
| 37870 chr10 manual_curation CDS 3977616 3978214 . - 1 Parent=GSCOCT00034858001 | |
| 37871 chr10 manual_curation CDS 3976359 3976540 . - 0 Parent=GSCOCT00034858001 | |
| 37872 chr10 manual_curation CDS 3975846 3976106 . - 2 Parent=GSCOCT00034858001 | |
| 37873 chr10 manual_curation CDS 3975178 3975481 . - 2 Parent=GSCOCT00034858001 | |
| 37874 chr10 manual_curation gene 3992495 4017957 . + . ID=GSCOCG00034857001;Name=Cc10_g05070 | |
| 37875 chr10 manual_curation mRNA 3992495 4017957 . + . ID=GSCOCT00034857001;Parent=GSCOCG00034857001;Name=Cc10_g05070 | |
| 37876 chr10 manual_curation polypeptide 3992668 4017925 . + . ID=GSCOCP00034857001;Dbxref=InterPro:IPR001757,InterPro:IPR004014,InterPro:IPR005782,InterPro:IPR005834,InterPro:IPR006068,InterPro:IPR008250,InterPro:IPR018303,PANTHER:PTHR11939,PFAM:PF00122,PFAM:PF00689,PFAM:PF00690,PFAM:PF00702,PRINTS:PR00119,PROSITE:PS00154,SMART:SM00831,SwissProt:P54209,SwissProt:Q9SY55,SwissProt:Q9YGL9,TAIR:AT1G07670.1,TAIR:AT1G07810.1,TAIR:AT1G10130.1,TIGRFAMs:TIGR01116,TIGRFAMs:TIGR01494,TrEMBL:B9IBQ1,TrEMBL:B9R6Y5,TrEMBL:D7KKM3;Derives_from=GSCOCT00034857001;Name=Cc10_g05070;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005388,GO:0005524,GO:0006754,GO:0006812,GO:0006816,GO:0008152,GO:0016020,GO:0016021,CC_EC_number:3.6.3.8,PRODUCT:Calcium-transporting ATPase 3%2C endoplasmic reticulum-type,CC_functional_completeness:complete,CC_gene:ECA3,CC_gene:CA1,CC_gene:ATP2A3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034857001~ Calcium-transporting ATPase 3%2C endoplasmic reticulum-type~ ECA3~ complete;original_location=complement(join(5068502..5068534%2C5068357..5068407%2C5068162..5068195%2C5067508..5067525%2C5066248..5066384%2C5065783..5065857%2C5063388..5063433%2C5062030..5062089%2C5061837..5061917%2C5061221..5061306%2C5060141..5060242%2C5060009..5060062%2C5058619..5058720%2C5058456..5058514%2C5056973..5057117%2C5056167..5056274%2C5055137..5055289%2C5054946..5055050%2C5053240..5053436%2C5052188..5052299%2C5051361..5051459%2C5051121..5051266%2C5050952..5051009%2C5049767..5049859%2C5048546..5048596%2C5048262..5048393%2C5047129..5047230%2C5046281..5046335%2C5045335..5045420%2C5044886..5045034%2C5044609..5044714%2C5044442..5044495%2C5043489..5043534%2C5043277..5043344));owner=coffea | |
| 37877 chr10 manual_curation exon 4017858 4017957 . + . Parent=GSCOCT00034857001 | |
| 37878 chr10 manual_curation exon 4017668 4017713 . + . Parent=GSCOCT00034857001 | |
| 37879 chr10 manual_curation exon 4016707 4016760 . + . Parent=GSCOCT00034857001 | |
| 37880 chr10 manual_curation exon 4016488 4016593 . + . Parent=GSCOCT00034857001 | |
| 37881 chr10 manual_curation exon 4016168 4016316 . + . Parent=GSCOCT00034857001 | |
| 37882 chr10 manual_curation exon 4015782 4015867 . + . Parent=GSCOCT00034857001 | |
| 37883 chr10 manual_curation exon 4014867 4014921 . + . Parent=GSCOCT00034857001 | |
| 37884 chr10 manual_curation exon 4013972 4014073 . + . Parent=GSCOCT00034857001 | |
| 37885 chr10 manual_curation exon 4012809 4012940 . + . Parent=GSCOCT00034857001 | |
| 37886 chr10 manual_curation exon 4012606 4012656 . + . Parent=GSCOCT00034857001 | |
| 37887 chr10 manual_curation exon 4011343 4011435 . + . Parent=GSCOCT00034857001 | |
| 37888 chr10 manual_curation exon 4010193 4010250 . + . Parent=GSCOCT00034857001 | |
| 37889 chr10 manual_curation exon 4009936 4010081 . + . Parent=GSCOCT00034857001 | |
| 37890 chr10 manual_curation exon 4009743 4009841 . + . Parent=GSCOCT00034857001 | |
| 37891 chr10 manual_curation exon 4008903 4009014 . + . Parent=GSCOCT00034857001 | |
| 37892 chr10 manual_curation exon 4007766 4007962 . + . Parent=GSCOCT00034857001 | |
| 37893 chr10 manual_curation exon 4006152 4006256 . + . Parent=GSCOCT00034857001 | |
| 37894 chr10 manual_curation exon 4005913 4006065 . + . Parent=GSCOCT00034857001 | |
| 37895 chr10 manual_curation exon 4004928 4005035 . + . Parent=GSCOCT00034857001 | |
| 37896 chr10 manual_curation exon 4004085 4004229 . + . Parent=GSCOCT00034857001 | |
| 37897 chr10 manual_curation exon 4002688 4002746 . + . Parent=GSCOCT00034857001 | |
| 37898 chr10 manual_curation exon 4002482 4002583 . + . Parent=GSCOCT00034857001 | |
| 37899 chr10 manual_curation exon 4001140 4001193 . + . Parent=GSCOCT00034857001 | |
| 37900 chr10 manual_curation exon 4000960 4001061 . + . Parent=GSCOCT00034857001 | |
| 37901 chr10 manual_curation exon 3999896 3999981 . + . Parent=GSCOCT00034857001 | |
| 37902 chr10 manual_curation exon 3999285 3999365 . + . Parent=GSCOCT00034857001 | |
| 37903 chr10 manual_curation exon 3999113 3999172 . + . Parent=GSCOCT00034857001 | |
| 37904 chr10 manual_curation exon 3997769 3997814 . + . Parent=GSCOCT00034857001 | |
| 37905 chr10 manual_curation exon 3995345 3995419 . + . Parent=GSCOCT00034857001 | |
| 37906 chr10 manual_curation exon 3994818 3994954 . + . Parent=GSCOCT00034857001 | |
| 37907 chr10 manual_curation exon 3993677 3993694 . + . Parent=GSCOCT00034857001 | |
| 37908 chr10 manual_curation exon 3993007 3993040 . + . Parent=GSCOCT00034857001 | |
| 37909 chr10 manual_curation exon 3992795 3992845 . + . Parent=GSCOCT00034857001 | |
| 37910 chr10 manual_curation exon 3992495 3992700 . + . Parent=GSCOCT00034857001 | |
| 37911 chr10 manual_curation CDS 4017858 4017925 . + 1 Parent=GSCOCT00034857001 | |
| 37912 chr10 manual_curation CDS 4017668 4017713 . + 0 Parent=GSCOCT00034857001 | |
| 37913 chr10 manual_curation CDS 4016707 4016760 . + 0 Parent=GSCOCT00034857001 | |
| 37914 chr10 manual_curation CDS 4016488 4016593 . + 2 Parent=GSCOCT00034857001 | |
| 37915 chr10 manual_curation CDS 4016168 4016316 . + 0 Parent=GSCOCT00034857001 | |
| 37916 chr10 manual_curation CDS 4015782 4015867 . + 1 Parent=GSCOCT00034857001 | |
| 37917 chr10 manual_curation CDS 4014867 4014921 . + 0 Parent=GSCOCT00034857001 | |
| 37918 chr10 manual_curation CDS 4013972 4014073 . + 0 Parent=GSCOCT00034857001 | |
| 37919 chr10 manual_curation CDS 4012809 4012940 . + 0 Parent=GSCOCT00034857001 | |
| 37920 chr10 manual_curation CDS 4012606 4012656 . + 0 Parent=GSCOCT00034857001 | |
| 37921 chr10 manual_curation CDS 4011343 4011435 . + 0 Parent=GSCOCT00034857001 | |
| 37922 chr10 manual_curation CDS 4010193 4010250 . + 2 Parent=GSCOCT00034857001 | |
| 37923 chr10 manual_curation CDS 4009936 4010081 . + 0 Parent=GSCOCT00034857001 | |
| 37924 chr10 manual_curation CDS 4009743 4009841 . + 0 Parent=GSCOCT00034857001 | |
| 37925 chr10 manual_curation CDS 4008903 4009014 . + 2 Parent=GSCOCT00034857001 | |
| 37926 chr10 manual_curation CDS 4007766 4007962 . + 0 Parent=GSCOCT00034857001 | |
| 37927 chr10 manual_curation CDS 4006152 4006256 . + 0 Parent=GSCOCT00034857001 | |
| 37928 chr10 manual_curation CDS 4005913 4006065 . + 0 Parent=GSCOCT00034857001 | |
| 37929 chr10 manual_curation CDS 4004928 4005035 . + 0 Parent=GSCOCT00034857001 | |
| 37930 chr10 manual_curation CDS 4004085 4004229 . + 2 Parent=GSCOCT00034857001 | |
| 37931 chr10 manual_curation CDS 4002688 4002746 . + 0 Parent=GSCOCT00034857001 | |
| 37932 chr10 manual_curation CDS 4002482 4002583 . + 0 Parent=GSCOCT00034857001 | |
| 37933 chr10 manual_curation CDS 4001140 4001193 . + 0 Parent=GSCOCT00034857001 | |
| 37934 chr10 manual_curation CDS 4000960 4001061 . + 0 Parent=GSCOCT00034857001 | |
| 37935 chr10 manual_curation CDS 3999896 3999981 . + 1 Parent=GSCOCT00034857001 | |
| 37936 chr10 manual_curation CDS 3999285 3999365 . + 1 Parent=GSCOCT00034857001 | |
| 37937 chr10 manual_curation CDS 3999113 3999172 . + 1 Parent=GSCOCT00034857001 | |
| 37938 chr10 manual_curation CDS 3997769 3997814 . + 0 Parent=GSCOCT00034857001 | |
| 37939 chr10 manual_curation CDS 3995345 3995419 . + 0 Parent=GSCOCT00034857001 | |
| 37940 chr10 manual_curation CDS 3994818 3994954 . + 1 Parent=GSCOCT00034857001 | |
| 37941 chr10 manual_curation CDS 3993677 3993694 . + 1 Parent=GSCOCT00034857001 | |
| 37942 chr10 manual_curation CDS 3993007 3993040 . + 0 Parent=GSCOCT00034857001 | |
| 37943 chr10 manual_curation CDS 3992795 3992845 . + 0 Parent=GSCOCT00034857001 | |
| 37944 chr10 manual_curation CDS 3992668 3992700 . + 0 Parent=GSCOCT00034857001 | |
| 37945 chr10 manual_curation gene 4018098 4020464 . - . ID=GSCOCG00034856001;Name=Cc10_g05080 | |
| 37946 chr10 manual_curation mRNA 4018098 4020464 . - . ID=GSCOCT00034856001;Parent=GSCOCG00034856001;Name=Cc10_g05080 | |
| 37947 chr10 manual_curation polypeptide 4018162 4020343 . - . ID=GSCOCP00034856001;Derives_from=GSCOCT00034856001;Name=Cc10_g05080;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034856001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(5040859..5040901%2C5042805..5043040);owner=coffea | |
| 37948 chr10 manual_curation exon 4020301 4020464 . - . Parent=GSCOCT00034856001 | |
| 37949 chr10 manual_curation exon 4018098 4018397 . - . Parent=GSCOCT00034856001 | |
| 37950 chr10 manual_curation CDS 4020301 4020343 . - 0 Parent=GSCOCT00034856001 | |
| 37951 chr10 manual_curation CDS 4018162 4018397 . - 1 Parent=GSCOCT00034856001 | |
| 37952 chr10 manual_curation gene 4020730 4026260 . - . ID=GSCOCG00034855001;Name=Cc10_g05090 | |
| 37953 chr10 manual_curation mRNA 4020730 4026260 . - . ID=GSCOCT00034855001;Parent=GSCOCG00034855001;Name=Cc10_g05090 | |
| 37954 chr10 manual_curation polypeptide 4021148 4026102 . - . ID=GSCOCP00034855001;Dbxref=InterPro:IPR001563,PANTHER:PTHR11802,PFAM:PF00450,PRINTS:PR00724,SwissProt:Q8VZU3,SwissProt:Q9C7D6,SwissProt:Q9C7Z9,TAIR:AT1G73300.1,TAIR:AT3G12203.1,TAIR:AT5G09640.1,TrEMBL:B0I1I0,TrEMBL:B0I1I1,TrEMBL:B9R6Y4;Derives_from=GSCOCT00034855001;Name=Cc10_g05090;Ontology_term=CC_evidence_code:ISS,GO:0004185,GO:0006508,CC_EC_number:3.4.16.5,PRODUCT:Serine carboxypeptidase-like 18,CC_functional_completeness:complete,CC_gene:SCPL18,CC_gene:SCPL17,CC_gene:SCPL19;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034855001~ Serine carboxypeptidase-like 18~ SCPL18~ complete;original_location=join(5035100..5035275%2C5035936..5036081%2C5036524..5036600%2C5036703..5036825%2C5037096..5037198%2C5037799..5037836%2C5037935..5038033%2C5038115..5038201%2C5038295..5038447%2C5038557..5038628%2C5039290..5039408%2C5039558..5039671%2C5039777..5039816%2C5039971..5040054);owner=coffea | |
| 37955 chr10 manual_curation exon 4025927 4026260 . - . Parent=GSCOCT00034855001 | |
| 37956 chr10 manual_curation exon 4025121 4025266 . - . Parent=GSCOCT00034855001 | |
| 37957 chr10 manual_curation exon 4024602 4024678 . - . Parent=GSCOCT00034855001 | |
| 37958 chr10 manual_curation exon 4024377 4024499 . - . Parent=GSCOCT00034855001 | |
| 37959 chr10 manual_curation exon 4024004 4024106 . - . Parent=GSCOCT00034855001 | |
| 37960 chr10 manual_curation exon 4023366 4023403 . - . Parent=GSCOCT00034855001 | |
| 37961 chr10 manual_curation exon 4023169 4023267 . - . Parent=GSCOCT00034855001 | |
| 37962 chr10 manual_curation exon 4023001 4023087 . - . Parent=GSCOCT00034855001 | |
| 37963 chr10 manual_curation exon 4022755 4022907 . - . Parent=GSCOCT00034855001 | |
| 37964 chr10 manual_curation exon 4022574 4022645 . - . Parent=GSCOCT00034855001 | |
| 37965 chr10 manual_curation exon 4021794 4021912 . - . Parent=GSCOCT00034855001 | |
| 37966 chr10 manual_curation exon 4021531 4021644 . - . Parent=GSCOCT00034855001 | |
| 37967 chr10 manual_curation exon 4021386 4021425 . - . Parent=GSCOCT00034855001 | |
| 37968 chr10 manual_curation exon 4020730 4021231 . - . Parent=GSCOCT00034855001 | |
| 37969 chr10 manual_curation CDS 4025927 4026102 . - 0 Parent=GSCOCT00034855001 | |
| 37970 chr10 manual_curation CDS 4025121 4025266 . - 2 Parent=GSCOCT00034855001 | |
| 37971 chr10 manual_curation CDS 4024602 4024678 . - 1 Parent=GSCOCT00034855001 | |
| 37972 chr10 manual_curation CDS 4024377 4024499 . - 0 Parent=GSCOCT00034855001 | |
| 37973 chr10 manual_curation CDS 4024004 4024106 . - 0 Parent=GSCOCT00034855001 | |
| 37974 chr10 manual_curation CDS 4023366 4023403 . - 1 Parent=GSCOCT00034855001 | |
| 37975 chr10 manual_curation CDS 4023169 4023267 . - 0 Parent=GSCOCT00034855001 | |
| 37976 chr10 manual_curation CDS 4023001 4023087 . - 0 Parent=GSCOCT00034855001 | |
| 37977 chr10 manual_curation CDS 4022755 4022907 . - 0 Parent=GSCOCT00034855001 | |
| 37978 chr10 manual_curation CDS 4022574 4022645 . - 0 Parent=GSCOCT00034855001 | |
| 37979 chr10 manual_curation CDS 4021794 4021912 . - 0 Parent=GSCOCT00034855001 | |
| 37980 chr10 manual_curation CDS 4021531 4021644 . - 2 Parent=GSCOCT00034855001 | |
| 37981 chr10 manual_curation CDS 4021386 4021425 . - 2 Parent=GSCOCT00034855001 | |
| 37982 chr10 manual_curation CDS 4021148 4021231 . - 0 Parent=GSCOCT00034855001 | |
| 37983 chr10 manual_curation gene 4029584 4035102 . - . ID=GSCOCG00034854001;Name=Cc10_g05100 | |
| 37984 chr10 manual_curation mRNA 4029584 4035102 . - . ID=GSCOCT00034854001;Parent=GSCOCG00034854001;Name=Cc10_g05100 | |
| 37985 chr10 manual_curation polypeptide 4029776 4034940 . - . ID=GSCOCP00034854001;Dbxref=InterPro:IPR001563,PANTHER:PTHR11802,PFAM:PF00450,PRINTS:PR00724,SwissProt:O64811,SwissProt:Q8H780,SwissProt:Q8VZU3,TAIR:AT1G73300.1,TAIR:AT2G23010.2,TAIR:AT5G09640.1,TrEMBL:B0I1I0,TrEMBL:B0I1I1,TrEMBL:F6H185;Derives_from=GSCOCT00034854001;Name=Cc10_g05100;Ontology_term=CC_evidence_code:ISS,GO:0004185,GO:0006508,CC_EC_number:3.4.16.5,PRODUCT:Serine carboxypeptidase-like 9,CC_functional_completeness:complete,CC_gene:SCPL9,CC_gene:SCPL19,CC_gene:SCPL13;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034854001~ Serine carboxypeptidase-like 9~ SCPL9~ complete;original_location=join(5026262..5026440%2C5026541..5026686%2C5027388..5027464%2C5027552..5027674%2C5028012..5028161%2C5029251..5029349%2C5029443..5029517%2C5029627..5029776%2C5029898..5029969%2C5030767..5030885%2C5030995..5031108%2C5031213..5031252%2C5031343..5031426);owner=coffea | |
| 37986 chr10 manual_curation exon 4034762 4035102 . - . Parent=GSCOCT00034854001 | |
| 37987 chr10 manual_curation exon 4034516 4034661 . - . Parent=GSCOCT00034854001 | |
| 37988 chr10 manual_curation exon 4033738 4033814 . - . Parent=GSCOCT00034854001 | |
| 37989 chr10 manual_curation exon 4033528 4033650 . - . Parent=GSCOCT00034854001 | |
| 37990 chr10 manual_curation exon 4033041 4033190 . - . Parent=GSCOCT00034854001 | |
| 37991 chr10 manual_curation exon 4031853 4031951 . - . Parent=GSCOCT00034854001 | |
| 37992 chr10 manual_curation exon 4031685 4031759 . - . Parent=GSCOCT00034854001 | |
| 37993 chr10 manual_curation exon 4031426 4031575 . - . Parent=GSCOCT00034854001 | |
| 37994 chr10 manual_curation exon 4031233 4031304 . - . Parent=GSCOCT00034854001 | |
| 37995 chr10 manual_curation exon 4030317 4030435 . - . Parent=GSCOCT00034854001 | |
| 37996 chr10 manual_curation exon 4030094 4030207 . - . Parent=GSCOCT00034854001 | |
| 37997 chr10 manual_curation exon 4029950 4029989 . - . Parent=GSCOCT00034854001 | |
| 37998 chr10 manual_curation exon 4029584 4029859 . - . Parent=GSCOCT00034854001 | |
| 37999 chr10 manual_curation CDS 4034762 4034940 . - 0 Parent=GSCOCT00034854001 | |
| 38000 chr10 manual_curation CDS 4034516 4034661 . - 2 Parent=GSCOCT00034854001 | |
| 38001 chr10 manual_curation CDS 4033738 4033814 . - 1 Parent=GSCOCT00034854001 | |
| 38002 chr10 manual_curation CDS 4033528 4033650 . - 0 Parent=GSCOCT00034854001 | |
| 38003 chr10 manual_curation CDS 4033041 4033190 . - 0 Parent=GSCOCT00034854001 | |
| 38004 chr10 manual_curation CDS 4031853 4031951 . - 0 Parent=GSCOCT00034854001 | |
| 38005 chr10 manual_curation CDS 4031685 4031759 . - 0 Parent=GSCOCT00034854001 | |
| 38006 chr10 manual_curation CDS 4031426 4031575 . - 0 Parent=GSCOCT00034854001 | |
| 38007 chr10 manual_curation CDS 4031233 4031304 . - 0 Parent=GSCOCT00034854001 | |
| 38008 chr10 manual_curation CDS 4030317 4030435 . - 0 Parent=GSCOCT00034854001 | |
| 38009 chr10 manual_curation CDS 4030094 4030207 . - 2 Parent=GSCOCT00034854001 | |
| 38010 chr10 manual_curation CDS 4029950 4029989 . - 2 Parent=GSCOCT00034854001 | |
| 38011 chr10 manual_curation CDS 4029776 4029859 . - 0 Parent=GSCOCT00034854001 | |
| 38012 chr10 manual_curation gene 4082344 4086731 . - . ID=GSCOCG00034853001;Name=Cc10_g05110 | |
| 38013 chr10 manual_curation mRNA 4082344 4086731 . - . ID=GSCOCT00034853001;Parent=GSCOCG00034853001;Name=Cc10_g05110 | |
| 38014 chr10 manual_curation polypeptide 4082344 4086611 . - . ID=GSCOCP00034853001;Dbxref=InterPro:IPR001563,PANTHER:PTHR11802,PFAM:PF00450,PRINTS:PR00724,SwissProt:Q2V465,SwissProt:Q9C7Z9,SwissProt:Q9CAU3,TAIR:AT1G33540.1,TAIR:AT1G73300.1,TAIR:AT2G22970.3,TrEMBL:B0I1I0,TrEMBL:B0I1I1,TrEMBL:F6H185;Derives_from=GSCOCT00034853001;Name=Cc10_g05110;Ontology_term=CC_evidence_code:ISS,GO:0004185,GO:0006508,CC_EC_number:3.4.16.5,PRODUCT:Serine carboxypeptidase-like 18,CC_functional_completeness:complete,CC_gene:SCPL18,CC_gene:SCPL2,CC_gene:SCPL11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034853001~ Serine carboxypeptidase-like 18~ SCPL18~ complete;original_location=join(4974591..4974778%2C4974881..4975026%2C4975563..4975639%2C4975852..4975974%2C4976496..4976598%2C4976994..4977031%2C4977226..4977324%2C4977429..4977542%2C4977706..4977842%2C4977971..4978040%2C4978126..4978244%2C4978362..4978475%2C4978699..4978858);owner=coffea | |
| 38015 chr10 manual_curation exon 4086424 4086731 . - . Parent=GSCOCT00034853001 | |
| 38016 chr10 manual_curation exon 4086176 4086321 . - . Parent=GSCOCT00034853001 | |
| 38017 chr10 manual_curation exon 4085563 4085639 . - . Parent=GSCOCT00034853001 | |
| 38018 chr10 manual_curation exon 4085228 4085350 . - . Parent=GSCOCT00034853001 | |
| 38019 chr10 manual_curation exon 4084604 4084706 . - . Parent=GSCOCT00034853001 | |
| 38020 chr10 manual_curation exon 4084171 4084208 . - . Parent=GSCOCT00034853001 | |
| 38021 chr10 manual_curation exon 4083878 4083976 . - . Parent=GSCOCT00034853001 | |
| 38022 chr10 manual_curation exon 4083660 4083773 . - . Parent=GSCOCT00034853001 | |
| 38023 chr10 manual_curation exon 4083360 4083496 . - . Parent=GSCOCT00034853001 | |
| 38024 chr10 manual_curation exon 4083162 4083231 . - . Parent=GSCOCT00034853001 | |
| 38025 chr10 manual_curation exon 4082958 4083076 . - . Parent=GSCOCT00034853001 | |
| 38026 chr10 manual_curation exon 4082727 4082840 . - . Parent=GSCOCT00034853001 | |
| 38027 chr10 manual_curation exon 4082344 4082503 . - . Parent=GSCOCT00034853001 | |
| 38028 chr10 manual_curation CDS 4086424 4086611 . - 0 Parent=GSCOCT00034853001 | |
| 38029 chr10 manual_curation CDS 4086176 4086321 . - 2 Parent=GSCOCT00034853001 | |
| 38030 chr10 manual_curation CDS 4085563 4085639 . - 1 Parent=GSCOCT00034853001 | |
| 38031 chr10 manual_curation CDS 4085228 4085350 . - 0 Parent=GSCOCT00034853001 | |
| 38032 chr10 manual_curation CDS 4084604 4084706 . - 0 Parent=GSCOCT00034853001 | |
| 38033 chr10 manual_curation CDS 4084171 4084208 . - 1 Parent=GSCOCT00034853001 | |
| 38034 chr10 manual_curation CDS 4083878 4083976 . - 0 Parent=GSCOCT00034853001 | |
| 38035 chr10 manual_curation CDS 4083660 4083773 . - 0 Parent=GSCOCT00034853001 | |
| 38036 chr10 manual_curation CDS 4083360 4083496 . - 0 Parent=GSCOCT00034853001 | |
| 38037 chr10 manual_curation CDS 4083162 4083231 . - 2 Parent=GSCOCT00034853001 | |
| 38038 chr10 manual_curation CDS 4082958 4083076 . - 0 Parent=GSCOCT00034853001 | |
| 38039 chr10 manual_curation CDS 4082727 4082840 . - 2 Parent=GSCOCT00034853001 | |
| 38040 chr10 manual_curation CDS 4082344 4082503 . - 2 Parent=GSCOCT00034853001 | |
| 38041 chr10 manual_curation gene 4095500 4103120 . - . ID=GSCOCG00034852001;Name=Cc10_g05120 | |
| 38042 chr10 manual_curation mRNA 4095500 4103120 . - . ID=GSCOCT00034852001;Parent=GSCOCG00034852001;Name=Cc10_g05120 | |
| 38043 chr10 manual_curation polypeptide 4095925 4103068 . - . ID=GSCOCP00034852001;Dbxref=GENE3D:G3DSA:1.25.40.10,InterPro:IPR001179,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR019734,PANTHER:PTHR10516,PFAM:PF00254,PROFILE:PS50005,PROFILE:PS50059,PROFILE:PS50293,SMART:SM00028,SwissProt:Q38931,SwissProt:Q43207,SwissProt:Q9FJL3,TAIR:AT3G25230.2,TAIR:AT3G54010.1,TAIR:AT5G48570.1,TrEMBL:B9GNN4,TrEMBL:B9R6Y2,TrEMBL:E0CP01;Derives_from=GSCOCT00034852001;Name=Cc10_g05120;Ontology_term=CC_evidence_code:ISS,GO:0005488,GO:0006457,CC_EC_number:missing_EC_number,PRODUCT:Peptidyl-prolyl cis-trans isomerase FKBP62,CC_functional_completeness:complete,CC_gene:FKBP62,CC_gene:FKBP65,CC_gene:FKBP70;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034852001~ Peptidyl-prolyl cis-trans isomerase FKBP62~ FKBP62~ complete;original_location=join(4958134..4958335%2C4958457..4958543%2C4959009..4959266%2C4959429..4959509%2C4959601..4959681%2C4960054..4960248%2C4961297..4961386%2C4961804..4961979%2C4963504..4963626%2C4963722..4963868%2C4964241..4964368%2C4964555..4964675%2C4965152..4965277);owner=coffea | |
| 38044 chr10 manual_curation exon 4102867 4103120 . - . Parent=GSCOCT00034852001 | |
| 38045 chr10 manual_curation exon 4102659 4102745 . - . Parent=GSCOCT00034852001 | |
| 38046 chr10 manual_curation exon 4101936 4102193 . - . Parent=GSCOCT00034852001 | |
| 38047 chr10 manual_curation exon 4101693 4101773 . - . Parent=GSCOCT00034852001 | |
| 38048 chr10 manual_curation exon 4101521 4101601 . - . Parent=GSCOCT00034852001 | |
| 38049 chr10 manual_curation exon 4100954 4101148 . - . Parent=GSCOCT00034852001 | |
| 38050 chr10 manual_curation exon 4099816 4099905 . - . Parent=GSCOCT00034852001 | |
| 38051 chr10 manual_curation exon 4099223 4099398 . - . Parent=GSCOCT00034852001 | |
| 38052 chr10 manual_curation exon 4097576 4097698 . - . Parent=GSCOCT00034852001 | |
| 38053 chr10 manual_curation exon 4097334 4097480 . - . Parent=GSCOCT00034852001 | |
| 38054 chr10 manual_curation exon 4096834 4096961 . - . Parent=GSCOCT00034852001 | |
| 38055 chr10 manual_curation exon 4096527 4096647 . - . Parent=GSCOCT00034852001 | |
| 38056 chr10 manual_curation exon 4095500 4096050 . - . Parent=GSCOCT00034852001 | |
| 38057 chr10 manual_curation CDS 4102867 4103068 . - 0 Parent=GSCOCT00034852001 | |
| 38058 chr10 manual_curation CDS 4102659 4102745 . - 1 Parent=GSCOCT00034852001 | |
| 38059 chr10 manual_curation CDS 4101936 4102193 . - 1 Parent=GSCOCT00034852001 | |
| 38060 chr10 manual_curation CDS 4101693 4101773 . - 1 Parent=GSCOCT00034852001 | |
| 38061 chr10 manual_curation CDS 4101521 4101601 . - 1 Parent=GSCOCT00034852001 | |
| 38062 chr10 manual_curation CDS 4100954 4101148 . - 1 Parent=GSCOCT00034852001 | |
| 38063 chr10 manual_curation CDS 4099816 4099905 . - 1 Parent=GSCOCT00034852001 | |
| 38064 chr10 manual_curation CDS 4099223 4099398 . - 1 Parent=GSCOCT00034852001 | |
| 38065 chr10 manual_curation CDS 4097576 4097698 . - 0 Parent=GSCOCT00034852001 | |
| 38066 chr10 manual_curation CDS 4097334 4097480 . - 0 Parent=GSCOCT00034852001 | |
| 38067 chr10 manual_curation CDS 4096834 4096961 . - 0 Parent=GSCOCT00034852001 | |
| 38068 chr10 manual_curation CDS 4096527 4096647 . - 2 Parent=GSCOCT00034852001 | |
| 38069 chr10 manual_curation CDS 4095925 4096050 . - 0 Parent=GSCOCT00034852001 | |
| 38070 chr10 manual_curation gene 4107170 4108606 . - . ID=GSCOCG00034851001;Name=Cc10_g05130 | |
| 38071 chr10 manual_curation mRNA 4107170 4108606 . - . ID=GSCOCT00034851001;Parent=GSCOCG00034851001;Name=Cc10_g05130 | |
| 38072 chr10 manual_curation polypeptide 4107588 4108094 . - . ID=GSCOCP00034851001;Dbxref=InterPro:IPR016972,PIR:PIRSF031279,TAIR:AT1G10140.1,TAIR:AT1G58420.1,TrEMBL:B9SH26,TrEMBL:F6H184,TrEMBL:I1JTS1;Derives_from=GSCOCT00034851001;Name=Cc10_g05130;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterised conserved protein UCP031279,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034851001~ Putative Uncharacterised conserved protein UCP031279~ unknown_gene~ complete;original_location=4953108..4953614;owner=coffea | |
| 38073 chr10 manual_curation exon 4107170 4108606 . - . Parent=GSCOCT00034851001 | |
| 38074 chr10 manual_curation CDS 4107588 4108094 . - 0 Parent=GSCOCT00034851001 | |
| 38075 chr10 manual_curation gene 4117095 4118855 . + . ID=GSCOCG00034850001;Name=Cc10_g05140 | |
| 38076 chr10 manual_curation mRNA 4117095 4118855 . + . ID=GSCOCT00034850001;Parent=GSCOCG00034850001;Name=Cc10_g05140 | |
| 38077 chr10 manual_curation polypeptide 4117305 4118855 . + . ID=GSCOCP00034850001;Dbxref=InterPro:IPR003386,PANTHER:PTHR11440,PFAM:PF02450,SwissProt:Q6XPZ3,SwissProt:Q8NCC3,SwissProt:Q9FZI8,TAIR:AT1G27480.1,TrEMBL:A5BNK6,TrEMBL:F6H183,TrEMBL:I1K884;Derives_from=GSCOCT00034850001;Name=Cc10_g05140;Ontology_term=CC_evidence_code:ISS,GO:0004607,GO:0006629,CC_EC_number:2.3.1.43,PRODUCT:Lecithin-cholesterol acyltransferase-like 1,CC_functional_completeness:complete,CC_gene:LCAT1,CC_gene:PLA2G15;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034850001~ Lecithin-cholesterol acyltransferase-like 1~ LCAT1~ complete;original_location=complement(join(4943557..4943897%2C4942347..4943232));owner=coffea | |
| 38078 chr10 manual_curation exon 4117970 4118855 . + . Parent=GSCOCT00034850001 | |
| 38079 chr10 manual_curation exon 4117095 4117645 . + . Parent=GSCOCT00034850001 | |
| 38080 chr10 manual_curation CDS 4117970 4118855 . + 2 Parent=GSCOCT00034850001 | |
| 38081 chr10 manual_curation CDS 4117305 4117645 . + 0 Parent=GSCOCT00034850001 | |
| 38082 chr10 manual_curation gene 4121019 4124740 . + . ID=GSCOCG00034848001;Name=Cc10_g05150 | |
| 38083 chr10 manual_curation mRNA 4121019 4124740 . + . ID=GSCOCT00034848001;Parent=GSCOCG00034848001;Name=Cc10_g05150 | |
| 38084 chr10 manual_curation polypeptide 4121262 4124192 . + . ID=GSCOCP00034848001;Dbxref=InterPro:IPR005607,PFAM:PF03909,PROFILE:PS50858,SMART:SM00751,TAIR:AT1G10720.1,TAIR:AT3G49800.1,TAIR:AT5G65910.1,TrEMBL:B9IBL7,TrEMBL:B9IBP6,TrEMBL:B9R6X3;Derives_from=GSCOCT00034848001;Name=Cc10_g05150;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative BSD domain-containing protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034848001~ Putative BSD domain-containing protein~ unknown_gene~ modules;original_location=complement(join(4939223..4939940%2C4938151..4938338%2C4937010..4937519));owner=coffea | |
| 38085 chr10 manual_curation exon 4123683 4124740 . + . Parent=GSCOCT00034848001 | |
| 38086 chr10 manual_curation exon 4122864 4123051 . + . Parent=GSCOCT00034848001 | |
| 38087 chr10 manual_curation exon 4121019 4121979 . + . Parent=GSCOCT00034848001 | |
| 38088 chr10 manual_curation CDS 4123683 4124192 . + 0 Parent=GSCOCT00034848001 | |
| 38089 chr10 manual_curation CDS 4122864 4123051 . + 1 Parent=GSCOCT00034848001 | |
| 38090 chr10 manual_curation CDS 4121262 4121979 . + 0 Parent=GSCOCT00034848001 | |
| 38091 chr10 manual_curation gene 4124907 4127276 . - . ID=GSCOCG00034847001;Name=Cc10_g05160 | |
| 38092 chr10 manual_curation mRNA 4124907 4127276 . - . ID=GSCOCT00034847001;Parent=GSCOCG00034847001;Name=Cc10_g05160 | |
| 38093 chr10 manual_curation polypeptide 4124907 4127276 . - . ID=GSCOCP00034847001;Dbxref=InterPro:IPR000719,InterPro:IPR000858,InterPro:IPR001480,InterPro:IPR002290,InterPro:IPR003609,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00954,PFAM:PF01453,PROFILE:PS50011,PROFILE:PS50927,PROFILE:PS50948,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF51110,SUPERFAMILY:SSF56112,SwissProt:O64477,SwissProt:P17801,SwissProt:Q9FLV4,TAIR:AT1G34300.1,TAIR:AT2G19130.1,TAIR:AT5G35370.1,TrEMBL:B9SBW6,TrEMBL:F6GZX6,TrEMBL:F6GZX9;Derives_from=GSCOCT00034847001;Name=Cc10_g05160;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0005529,GO:0006468,GO:0048544,CC_EC_number:2.7.11.25,PRODUCT:Putative receptor protein kinase ZmPK1,CC_functional_completeness:complete,CC_gene:PK1,CC_gene:At2g19130,CC_gene:At5g24080;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034847001~ Putative receptor protein kinase ZmPK1~ PK1~ complete;original_location=join(4933926..4934545%2C4934645..4935219%2C4935277..4936062%2C4936162..4936295);owner=coffea | |
| 38094 chr10 manual_curation exon 4126657 4127276 . - . Parent=GSCOCT00034847001 | |
| 38095 chr10 manual_curation exon 4125983 4126557 . - . Parent=GSCOCT00034847001 | |
| 38096 chr10 manual_curation exon 4125140 4125925 . - . Parent=GSCOCT00034847001 | |
| 38097 chr10 manual_curation exon 4124907 4125040 . - . Parent=GSCOCT00034847001 | |
| 38098 chr10 manual_curation CDS 4126657 4127276 . - 0 Parent=GSCOCT00034847001 | |
| 38099 chr10 manual_curation CDS 4125983 4126557 . - 2 Parent=GSCOCT00034847001 | |
| 38100 chr10 manual_curation CDS 4125140 4125925 . - 1 Parent=GSCOCT00034847001 | |
| 38101 chr10 manual_curation CDS 4124907 4125040 . - 1 Parent=GSCOCT00034847001 | |
| 38102 chr10 manual_curation gene 4129307 4136841 . - . ID=GSCOCG00034846001;Name=Cc10_g05170 | |
| 38103 chr10 manual_curation mRNA 4129307 4136841 . - . ID=GSCOCT00034846001;Parent=GSCOCG00034846001;Name=Cc10_g05170 | |
| 38104 chr10 manual_curation polypeptide 4129676 4136841 . - . ID=GSCOCP00034846001;Dbxref=InterPro:IPR008676,PANTHER:PTHR10880,PFAM:PF05712,SwissProt:Q5NVP9,SwissProt:Q6AYU1,SwissProt:Q6BT38,TAIR:AT1G02740.1,TAIR:AT4G37280.1,TrEMBL:B9MVW4,TrEMBL:I1JTN1,TrEMBL:I1K828;Derives_from=GSCOCT00034846001;Name=Cc10_g05170;Ontology_term=CC_evidence_code:ISS,GO:0005634,CC_EC_number:missing_EC_number,PRODUCT:Putative Mortality factor 4-like protein 1,CC_functional_completeness:complete,CC_gene:Morf4l1,CC_gene:MORF4L1,CC_gene:EAF3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034846001~ Putative Mortality factor 4-like protein 1~ Morf4l1~ complete;original_location=join(4924361..4924395%2C4925543..4925676%2C4926203..4926267%2C4928023..4928127%2C4929190..4929269%2C4930117..4930298%2C4931173..4931257%2C4931436..4931526);owner=coffea | |
| 38105 chr10 manual_curation exon 4136807 4136841 . - . Parent=GSCOCT00034846001 | |
| 38106 chr10 manual_curation exon 4135526 4135659 . - . Parent=GSCOCT00034846001 | |
| 38107 chr10 manual_curation exon 4134935 4134999 . - . Parent=GSCOCT00034846001 | |
| 38108 chr10 manual_curation exon 4133075 4133179 . - . Parent=GSCOCT00034846001 | |
| 38109 chr10 manual_curation exon 4131933 4132012 . - . Parent=GSCOCT00034846001 | |
| 38110 chr10 manual_curation exon 4130904 4131085 . - . Parent=GSCOCT00034846001 | |
| 38111 chr10 manual_curation exon 4129945 4130029 . - . Parent=GSCOCT00034846001 | |
| 38112 chr10 manual_curation exon 4129307 4129766 . - . Parent=GSCOCT00034846001 | |
| 38113 chr10 manual_curation CDS 4136807 4136841 . - 0 Parent=GSCOCT00034846001 | |
| 38114 chr10 manual_curation CDS 4135526 4135659 . - 2 Parent=GSCOCT00034846001 | |
| 38115 chr10 manual_curation CDS 4134935 4134999 . - 1 Parent=GSCOCT00034846001 | |
| 38116 chr10 manual_curation CDS 4133075 4133179 . - 0 Parent=GSCOCT00034846001 | |
| 38117 chr10 manual_curation CDS 4131933 4132012 . - 0 Parent=GSCOCT00034846001 | |
| 38118 chr10 manual_curation CDS 4130904 4131085 . - 2 Parent=GSCOCT00034846001 | |
| 38119 chr10 manual_curation CDS 4129945 4130029 . - 1 Parent=GSCOCT00034846001 | |
| 38120 chr10 manual_curation CDS 4129676 4129766 . - 2 Parent=GSCOCT00034846001 | |
| 38121 chr10 manual_curation gene 4136894 4138309 . - . ID=GSCOCG00034845001;Name=Cc10_g05180 | |
| 38122 chr10 manual_curation mRNA 4136894 4138309 . - . ID=GSCOCT00034845001;Parent=GSCOCG00034845001;Name=Cc10_g05180 | |
| 38123 chr10 manual_curation polypeptide 4136894 4138096 . - . ID=GSCOCP00034845001;Derives_from=GSCOCT00034845001;Name=Cc10_g05180;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034845001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(4923106..4923333%2C4924156..4924308);owner=coffea | |
| 38124 chr10 manual_curation exon 4137869 4138309 . - . Parent=GSCOCT00034845001 | |
| 38125 chr10 manual_curation exon 4136894 4137046 . - . Parent=GSCOCT00034845001 | |
| 38126 chr10 manual_curation CDS 4137869 4138096 . - 0 Parent=GSCOCT00034845001 | |
| 38127 chr10 manual_curation CDS 4136894 4137046 . - 0 Parent=GSCOCT00034845001 | |
| 38128 chr10 manual_curation gene 4147367 4148283 . - . ID=GSCOCG00034843001;Name=Cc10_g05190 | |
| 38129 chr10 manual_curation mRNA 4147367 4148283 . - . ID=GSCOCT00034843001;Parent=GSCOCG00034843001;Name=Cc10_g05190 | |
| 38130 chr10 manual_curation polypeptide 4147679 4148194 . - . ID=GSCOCP00034843001;Dbxref=InterPro:IPR001810,InterPro:IPR022364,PFAM:PF00646,SUPERFAMILY:SSF81383,SwissProt:Q7XAK4,SwissProt:Q9LUB6,SwissProt:Q9STX3,TAIR:AT4G24210.1,TAIR:AT5G48170.1,TrEMBL:E3TPZ5,TrEMBL:E3TPZ6,TrEMBL:F6GZW7;Derives_from=GSCOCT00034843001;Name=Cc10_g05190;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative F-box protein GID2,CC_functional_completeness:complete,CC_gene:GID2,CC_gene:SNE;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034843001~ Putative F-box protein GID2~ GID2~ complete;original_location=4913008..4913523;owner=coffea | |
| 38131 chr10 manual_curation exon 4147367 4148283 . - . Parent=GSCOCT00034843001 | |
| 38132 chr10 manual_curation CDS 4147679 4148194 . - 0 Parent=GSCOCT00034843001 | |
| 38133 chr10 manual_curation gene 4163851 4164799 . - . ID=GSCOCG00034841001;Name=Cc10_g05200 | |
| 38134 chr10 manual_curation mRNA 4163851 4164799 . - . ID=GSCOCT00034841001;Parent=GSCOCG00034841001;Name=Cc10_g05200 | |
| 38135 chr10 manual_curation polypeptide 4164085 4164543 . - . ID=GSCOCP00034841001;Dbxref=SwissProt:Q9C500,SwissProt:Q9FMH6,SwissProt:Q9M7N6,TAIR:AT1G47200.1,TAIR:AT5G27940.1,TAIR:AT5G43070.1,TrEMBL:B9R748,TrEMBL:F5C0G6,TrEMBL:F6GZW5;Derives_from=GSCOCT00034841001;Name=Cc10_g05200;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:MFP1 attachment factor 1,CC_functional_completeness:complete,CC_gene:MAF1,CC_gene:WPP2,CC_gene:WPP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034841001~ MFP1 attachment factor 1~ MAF1~ complete;original_location=4896659..4897117;owner=coffea | |
| 38136 chr10 manual_curation exon 4163851 4164799 . - . Parent=GSCOCT00034841001 | |
| 38137 chr10 manual_curation CDS 4164085 4164543 . - 0 Parent=GSCOCT00034841001 | |
| 38138 chr10 manual_curation gene 4166760 4168555 . - . ID=GSCOCG00034839001;Name=Cc10_g05210 | |
| 38139 chr10 manual_curation mRNA 4166760 4168555 . - . ID=GSCOCT00034839001;Parent=GSCOCG00034839001;Name=Cc10_g05210 | |
| 38140 chr10 manual_curation polypeptide 4166760 4168555 . - . ID=GSCOCP00034839001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:O65790,SwissProt:Q9FG65,TAIR:AT4G37310.1,TAIR:AT4G37360.1,TAIR:AT5G67310.1,TrEMBL:A9ZT57,TrEMBL:B9GNS3,TrEMBL:F6HSX3;Derives_from=GSCOCT00034839001;Name=Cc10_g05210;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:missing_EC_number,PRODUCT:Putative Cytochrome P450,CC_functional_completeness:complete,CC_gene:CYP81D1,CC_gene:CYP81F1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034839001~ Putative Cytochrome P450~ CYP81D1~ complete;original_location=join(4892647..4892803%2C4893084..4893150%2C4893254..4893363%2C4893691..4893924%2C4894246..4894442);owner=coffea | |
| 38141 chr10 manual_curation exon 4168399 4168555 . - . Parent=GSCOCT00034839001 | |
| 38142 chr10 manual_curation exon 4168052 4168118 . - . Parent=GSCOCT00034839001 | |
| 38143 chr10 manual_curation exon 4167839 4167948 . - . Parent=GSCOCT00034839001 | |
| 38144 chr10 manual_curation exon 4167278 4167511 . - . Parent=GSCOCT00034839001 | |
| 38145 chr10 manual_curation exon 4166760 4166956 . - . Parent=GSCOCT00034839001 | |
| 38146 chr10 manual_curation CDS 4168399 4168555 . - 0 Parent=GSCOCT00034839001 | |
| 38147 chr10 manual_curation CDS 4168052 4168118 . - 1 Parent=GSCOCT00034839001 | |
| 38148 chr10 manual_curation CDS 4167839 4167948 . - 2 Parent=GSCOCT00034839001 | |
| 38149 chr10 manual_curation CDS 4167278 4167511 . - 1 Parent=GSCOCT00034839001 | |
| 38150 chr10 manual_curation CDS 4166760 4166956 . - 1 Parent=GSCOCT00034839001 | |
| 38151 chr10 manual_curation gene 4168835 4170322 . - . ID=GSCOCG00034838001;Name=Cc10_g05220 | |
| 38152 chr10 manual_curation mRNA 4168835 4170322 . - . ID=GSCOCT00034838001;Parent=GSCOCG00034838001;Name=Cc10_g05220 | |
| 38153 chr10 manual_curation polypeptide 4168835 4170322 . - . ID=GSCOCP00034838001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:O65790,SwissProt:P93147,SwissProt:Q9FG65,TAIR:AT1G66540.1,TAIR:AT4G37320.1,TAIR:AT4G37360.1,TrEMBL:F6GZF8,TrEMBL:F6HSX0,TrEMBL:F6I2G3;Derives_from=GSCOCT00034838001;Name=Cc10_g05220;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.89,PRODUCT:Cytochrome P450 81D1,CC_functional_completeness:fragment,CC_gene:CYP81D1,CC_gene:CYP81E1,CC_gene:CYP81F1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034838001~ Cytochrome P450 81D1~ CYP81D1~ fragment;original_location=join(4890880..4890957%2C4891747..4892367);owner=coffea | |
| 38154 chr10 manual_curation exon 4170245 4170322 . - . Parent=GSCOCT00034838001 | |
| 38155 chr10 manual_curation exon 4168835 4169455 . - . Parent=GSCOCT00034838001 | |
| 38156 chr10 manual_curation CDS 4170245 4170322 . - 0 Parent=GSCOCT00034838001 | |
| 38157 chr10 manual_curation CDS 4168835 4169455 . - 0 Parent=GSCOCT00034838001 | |
| 38158 chr10 manual_curation gene 4175225 4178177 . - . ID=GSCOCG00034837001;Name=Cc10_g05230 | |
| 38159 chr10 manual_curation mRNA 4175225 4178177 . - . ID=GSCOCT00034837001;Parent=GSCOCG00034837001;Name=Cc10_g05230 | |
| 38160 chr10 manual_curation polypeptide 4175450 4178177 . - . ID=GSCOCP00034837001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:O65790,SwissProt:P93147,SwissProt:Q9FG65,TAIR:AT4G37310.1,TAIR:AT5G10600.1,TAIR:AT5G10610.1,TrEMBL:C5NM78,TrEMBL:C5NM79,TrEMBL:F6GZW3;Derives_from=GSCOCT00034837001;Name=Cc10_g05230;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.89,PRODUCT:Putative Isoflavone 2'-hydroxylase,CC_functional_completeness:complete,CC_gene:CYP81E1,CC_gene:CYP81F1,CC_gene:CYP81D1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034837001~ Putative Isoflavone 2'-hydroxylase~ CYP81E1~ complete;original_location=join(4883025..4883939%2C4885120..4885752);owner=coffea | |
| 38161 chr10 manual_curation exon 4177263 4178177 . - . Parent=GSCOCT00034837001 | |
| 38162 chr10 manual_curation exon 4175225 4176082 . - . Parent=GSCOCT00034837001 | |
| 38163 chr10 manual_curation CDS 4177263 4178177 . - 0 Parent=GSCOCT00034837001 | |
| 38164 chr10 manual_curation CDS 4175450 4176082 . - 0 Parent=GSCOCT00034837001 | |
| 38165 chr10 manual_curation gene 4179315 4182247 . - . ID=GSCOCG00034836001;Name=Cc10_g05240 | |
| 38166 chr10 manual_curation mRNA 4179315 4182247 . - . ID=GSCOCT00034836001;Parent=GSCOCG00034836001;Name=Cc10_g05240 | |
| 38167 chr10 manual_curation polypeptide 4180040 4182247 . - . ID=GSCOCP00034836001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00463,SUPERFAMILY:SSF48264,SwissProt:O65790,SwissProt:P93147,SwissProt:Q9FG65,TAIR:AT4G37310.1,TAIR:AT5G10600.1,TAIR:AT5G10610.1,TrEMBL:B9GNS5,TrEMBL:C5NM78,TrEMBL:C5NM79;Derives_from=GSCOCT00034836001;Name=Cc10_g05240;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.89,PRODUCT:Putative Isoflavone 2'-hydroxylase,CC_functional_completeness:fragment,CC_gene:CYP81E1,CC_gene:CYP81F1,CC_gene:CYP81D1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034836001~ Putative Isoflavone 2'-hydroxylase~ CYP81E1~ fragment;original_location=join(4878955..4879869%2C4881055..4881162);owner=coffea | |
| 38168 chr10 manual_curation exon 4181333 4182247 . - . Parent=GSCOCT00034836001 | |
| 38169 chr10 manual_curation exon 4179315 4180147 . - . Parent=GSCOCT00034836001 | |
| 38170 chr10 manual_curation CDS 4181333 4182247 . - 0 Parent=GSCOCT00034836001 | |
| 38171 chr10 manual_curation CDS 4180040 4180147 . - 0 Parent=GSCOCT00034836001 | |
| 38172 chr10 manual_curation gene 4187057 4190269 . - . ID=GSCOCG00034834001;Name=Cc10_g05250 | |
| 38173 chr10 manual_curation mRNA 4187057 4190269 . - . ID=GSCOCT00034834001;Parent=GSCOCG00034834001;Name=Cc10_g05250 | |
| 38174 chr10 manual_curation polypeptide 4187315 4189726 . - . ID=GSCOCP00034834001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:O65790,SwissProt:P93147,SwissProt:Q9FG65,TAIR:AT4G37310.1,TAIR:AT5G10600.1,TAIR:AT5G10610.1,TrEMBL:A1XEH9,TrEMBL:A1XEI0,TrEMBL:F6GZW3;Derives_from=GSCOCT00034834001;Name=Cc10_g05250;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.89,PRODUCT:Putative Cytochrome P450 81D1,CC_functional_completeness:fragment,CC_gene:CYP81D1,CC_gene:CYP81E1,CC_gene:CYP81F1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034834001~ Putative Cytochrome P450 81D1~ CYP81D1~ fragment;original_location=join(4871476..4872069%2C4873255..4873887);owner=coffea | |
| 38175 chr10 manual_curation exon 4189133 4190269 . - . Parent=GSCOCT00034834001 | |
| 38176 chr10 manual_curation exon 4187057 4187947 . - . Parent=GSCOCT00034834001 | |
| 38177 chr10 manual_curation CDS 4189133 4189726 . - 0 Parent=GSCOCT00034834001 | |
| 38178 chr10 manual_curation CDS 4187315 4187947 . - 0 Parent=GSCOCT00034834001 | |
| 38179 chr10 manual_curation gene 4191897 4195259 . - . ID=GSCOCG00034833001;Name=Cc10_g05260 | |
| 38180 chr10 manual_curation mRNA 4191897 4195259 . - . ID=GSCOCT00034833001;Parent=GSCOCG00034833001;Name=Cc10_g05260 | |
| 38181 chr10 manual_curation polypeptide 4192031 4195259 . - . ID=GSCOCP00034833001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:O65790,SwissProt:P93147,SwissProt:Q9FG65,TAIR:AT4G37370.1,TAIR:AT5G10600.1,TAIR:AT5G10610.1,TrEMBL:A1XEH9,TrEMBL:A1XEI0,TrEMBL:F6GZW3;Derives_from=GSCOCT00034833001;Name=Cc10_g05260;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.89,PRODUCT:Putative Isoflavone 2'-hydroxylase,CC_functional_completeness:complete,CC_gene:CYP81E1,CC_gene:CYP81F1,CC_gene:CYP81D1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034833001~ Putative Isoflavone 2'-hydroxylase~ CYP81E1~ complete;original_location=join(4865943..4866023%2C4866085..4866987%2C4868551..4869171);owner=coffea | |
| 38182 chr10 manual_curation exon 4195179 4195259 . - . Parent=GSCOCT00034833001 | |
| 38183 chr10 manual_curation exon 4194215 4195117 . - . Parent=GSCOCT00034833001 | |
| 38184 chr10 manual_curation exon 4191897 4192651 . - . Parent=GSCOCT00034833001 | |
| 38185 chr10 manual_curation CDS 4195179 4195259 . - 0 Parent=GSCOCT00034833001 | |
| 38186 chr10 manual_curation CDS 4194215 4195117 . - 0 Parent=GSCOCT00034833001 | |
| 38187 chr10 manual_curation CDS 4192031 4192651 . - 0 Parent=GSCOCT00034833001 | |
| 38188 chr10 manual_curation gene 4210545 4218618 . + . ID=GSCOCG00034830001;Name=Cc10_g05270 | |
| 38189 chr10 manual_curation mRNA 4210545 4218618 . + . ID=GSCOCT00034830001;Parent=GSCOCG00034830001;Name=Cc10_g05270 | |
| 38190 chr10 manual_curation polypeptide 4210698 4218325 . + . ID=GSCOCP00034830001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR006594,InterPro:IPR011046,InterPro:IPR013720,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019775,InterPro:IPR019781,InterPro:IPR019782,InterPro:IPR020472,PFAM:PF00400,PFAM:PF08513,PRINTS:PR00320,PROFILE:PS50082,PROFILE:PS50294,PROFILE:PS50896,PROSITE:PS00678,SMART:SM00320,SMART:SM00667,SUPERFAMILY:SSF50978,SwissProt:Q4R8H1,SwissProt:Q7SZM9,SwissProt:Q8BHJ5,TAIR:AT4G02730.1,TAIR:AT5G25150.1,TAIR:AT5G67320.1,TrEMBL:B9SG25,TrEMBL:F6HSW7,TrEMBL:I1MVR6;Derives_from=GSCOCT00034830001;Name=Cc10_g05270;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.7.11.7,PRODUCT:F-box-like/WD repeat-containing protein TBL1XR1,CC_functional_completeness:complete,CC_gene:Tbl1xr1,CC_gene:TBL1X,CC_gene:tbl1xr1-a;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034830001~ F-box-like/WD repeat-containing protein TBL1XR1~ Tbl1xr1~ complete;original_location=complement(join(4850444..4850504%2C4848968..4849113%2C4848495..4848885%2C4848064..4848158%2C4847903..4847949%2C4846991..4847141%2C4846782..4846845%2C4844777..4844935%2C4844550..4844671%2C4844389..4844463%2C4844063..4844116%2C4843886..4843959%2C4843466..4843540%2C4842877..4843096));owner=coffea | |
| 38191 chr10 manual_curation exon 4218106 4218618 . + . Parent=GSCOCT00034830001 | |
| 38192 chr10 manual_curation exon 4217662 4217736 . + . Parent=GSCOCT00034830001 | |
| 38193 chr10 manual_curation exon 4217243 4217316 . + . Parent=GSCOCT00034830001 | |
| 38194 chr10 manual_curation exon 4217086 4217139 . + . Parent=GSCOCT00034830001 | |
| 38195 chr10 manual_curation exon 4216739 4216813 . + . Parent=GSCOCT00034830001 | |
| 38196 chr10 manual_curation exon 4216531 4216652 . + . Parent=GSCOCT00034830001 | |
| 38197 chr10 manual_curation exon 4216267 4216425 . + . Parent=GSCOCT00034830001 | |
| 38198 chr10 manual_curation exon 4214357 4214420 . + . Parent=GSCOCT00034830001 | |
| 38199 chr10 manual_curation exon 4214061 4214211 . + . Parent=GSCOCT00034830001 | |
| 38200 chr10 manual_curation exon 4213253 4213299 . + . Parent=GSCOCT00034830001 | |
| 38201 chr10 manual_curation exon 4213044 4213138 . + . Parent=GSCOCT00034830001 | |
| 38202 chr10 manual_curation exon 4212317 4212707 . + . Parent=GSCOCT00034830001 | |
| 38203 chr10 manual_curation exon 4212089 4212234 . + . Parent=GSCOCT00034830001 | |
| 38204 chr10 manual_curation exon 4210545 4210758 . + . Parent=GSCOCT00034830001 | |
| 38205 chr10 manual_curation CDS 4218106 4218325 . + 2 Parent=GSCOCT00034830001 | |
| 38206 chr10 manual_curation CDS 4217662 4217736 . + 2 Parent=GSCOCT00034830001 | |
| 38207 chr10 manual_curation CDS 4217243 4217316 . + 0 Parent=GSCOCT00034830001 | |
| 38208 chr10 manual_curation CDS 4217086 4217139 . + 0 Parent=GSCOCT00034830001 | |
| 38209 chr10 manual_curation CDS 4216739 4216813 . + 0 Parent=GSCOCT00034830001 | |
| 38210 chr10 manual_curation CDS 4216531 4216652 . + 1 Parent=GSCOCT00034830001 | |
| 38211 chr10 manual_curation CDS 4216267 4216425 . + 1 Parent=GSCOCT00034830001 | |
| 38212 chr10 manual_curation CDS 4214357 4214420 . + 0 Parent=GSCOCT00034830001 | |
| 38213 chr10 manual_curation CDS 4214061 4214211 . + 2 Parent=GSCOCT00034830001 | |
| 38214 chr10 manual_curation CDS 4213253 4213299 . + 0 Parent=GSCOCT00034830001 | |
| 38215 chr10 manual_curation CDS 4213044 4213138 . + 1 Parent=GSCOCT00034830001 | |
| 38216 chr10 manual_curation CDS 4212317 4212707 . + 0 Parent=GSCOCT00034830001 | |
| 38217 chr10 manual_curation CDS 4212089 4212234 . + 1 Parent=GSCOCT00034830001 | |
| 38218 chr10 manual_curation CDS 4210698 4210758 . + 0 Parent=GSCOCT00034830001 | |
| 38219 chr10 manual_curation gene 4219300 4221850 . - . ID=GSCOCG00034829001;Name=Cc10_g05280 | |
| 38220 chr10 manual_curation mRNA 4219300 4221850 . - . ID=GSCOCT00034829001;Parent=GSCOCG00034829001;Name=Cc10_g05280 | |
| 38221 chr10 manual_curation polypeptide 4219622 4221726 . - . ID=GSCOCP00034829001;Dbxref=GENE3D:G3DSA:1.10.472.10,InterPro:IPR004367,InterPro:IPR006670,InterPro:IPR006671,InterPro:IPR011028,InterPro:IPR013763,InterPro:IPR014400,InterPro:IPR015453,PANTHER:PTHR10177:SF23,PFAM:PF00134,PFAM:PF02984,PIR:PIRSF001771,PROSITE:PS00292,SMART:SM00385,SUPERFAMILY:SSF47954,SwissProt:Q3ECW2,SwissProt:Q9C6A9,SwissProt:Q9FMH5,TAIR:AT1G47210.2,TAIR:AT1G47230.2,TAIR:AT5G43080.1,TrEMBL:E0CPN3,TrEMBL:O04388,TrEMBL:Q40492;Derives_from=GSCOCT00034829001;Name=Cc10_g05280;Ontology_term=CC_evidence_code:ISS,GO:0005634,CC_EC_number:missing_EC_number,PRODUCT:Putative cyclin-A3-1,CC_functional_completeness:complete,CC_gene:CYCA3-1,CC_gene:CYCA3-4,CC_gene:CYCA3-2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034829001~ Putative cyclin-A3-1~ CYCA3-1~ complete;original_location=join(4839476..4839676%2C4839734..4839829%2C4840301..4840533%2C4840640..4840792%2C4840892..4840925%2C4841022..4841171%2C4841279..4841413%2C4841509..4841580);owner=coffea | |
| 38222 chr10 manual_curation exon 4221526 4221850 . - . Parent=GSCOCT00034829001 | |
| 38223 chr10 manual_curation exon 4221373 4221468 . - . Parent=GSCOCT00034829001 | |
| 38224 chr10 manual_curation exon 4220669 4220901 . - . Parent=GSCOCT00034829001 | |
| 38225 chr10 manual_curation exon 4220410 4220562 . - . Parent=GSCOCT00034829001 | |
| 38226 chr10 manual_curation exon 4220277 4220310 . - . Parent=GSCOCT00034829001 | |
| 38227 chr10 manual_curation exon 4220031 4220180 . - . Parent=GSCOCT00034829001 | |
| 38228 chr10 manual_curation exon 4219789 4219923 . - . Parent=GSCOCT00034829001 | |
| 38229 chr10 manual_curation exon 4219300 4219693 . - . Parent=GSCOCT00034829001 | |
| 38230 chr10 manual_curation CDS 4221526 4221726 . - 0 Parent=GSCOCT00034829001 | |
| 38231 chr10 manual_curation CDS 4221373 4221468 . - 0 Parent=GSCOCT00034829001 | |
| 38232 chr10 manual_curation CDS 4220669 4220901 . - 0 Parent=GSCOCT00034829001 | |
| 38233 chr10 manual_curation CDS 4220410 4220562 . - 2 Parent=GSCOCT00034829001 | |
| 38234 chr10 manual_curation CDS 4220277 4220310 . - 2 Parent=GSCOCT00034829001 | |
| 38235 chr10 manual_curation CDS 4220031 4220180 . - 0 Parent=GSCOCT00034829001 | |
| 38236 chr10 manual_curation CDS 4219789 4219923 . - 0 Parent=GSCOCT00034829001 | |
| 38237 chr10 manual_curation CDS 4219622 4219693 . - 0 Parent=GSCOCT00034829001 | |
| 38238 chr10 manual_curation gene 4229193 4229868 . - . ID=GSCOCG00034828001;Name=Cc10_g05290 | |
| 38239 chr10 manual_curation mRNA 4229193 4229868 . - . ID=GSCOCT00034828001;Parent=GSCOCG00034828001;Name=Cc10_g05290 | |
| 38240 chr10 manual_curation polypeptide 4229193 4229868 . - . ID=GSCOCP00034828001;Dbxref=SwissProt:Q69SA9,SwissProt:Q9LJU2,SwissProt:Q9T042,TAIR:AT1G50950.1,TAIR:AT3G20560.1,TAIR:AT4G27080.2,TrEMBL:I1KEH2,TrEMBL:I1LSL9,TrEMBL:I1LSM0;Derives_from=GSCOCT00034828001;Name=Cc10_g05290;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:PDIL5-4,CC_gene:PDIL5-3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034828001~ Hypothetical protein~ PDIL5-4~ missing_functional_completeness;original_location=join(4831334..4831380%2C4831501..4831567%2C4831845..4832009);owner=coffea | |
| 38241 chr10 manual_curation exon 4229822 4229868 . - . Parent=GSCOCT00034828001 | |
| 38242 chr10 manual_curation exon 4229635 4229701 . - . Parent=GSCOCT00034828001 | |
| 38243 chr10 manual_curation exon 4229193 4229357 . - . Parent=GSCOCT00034828001 | |
| 38244 chr10 manual_curation CDS 4229822 4229868 . - 0 Parent=GSCOCT00034828001 | |
| 38245 chr10 manual_curation CDS 4229635 4229701 . - 2 Parent=GSCOCT00034828001 | |
| 38246 chr10 manual_curation CDS 4229193 4229357 . - 0 Parent=GSCOCT00034828001 | |
| 38247 chr10 manual_curation gene 4231947 4235924 . - . ID=GSCOCG00034827001;Name=Cc10_g05300 | |
| 38248 chr10 manual_curation mRNA 4231947 4235924 . - . ID=GSCOCT00034827001;Parent=GSCOCG00034827001;Name=Cc10_g05300 | |
| 38249 chr10 manual_curation polypeptide 4231947 4235924 . - . ID=GSCOCP00034827001;Dbxref=InterPro:IPR000719,InterPro:IPR011009,InterPro:IPR017442,PFAM:PF00069,PROFILE:PS50011,SUPERFAMILY:SSF56112,SwissProt:C0LGP4,SwissProt:P24805,SwissProt:Q9SD62,TAIR:AT3G22850.1,TAIR:AT5G19140.1,TAIR:AT5G43830.1,TrEMBL:A9PEF3,TrEMBL:Q5MCR8,TrEMBL:Q94KH9;Derives_from=GSCOCT00034827001;Name=Cc10_g05300;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Predicted protein,CC_functional_completeness:modules,CC_gene:At3g47110,CC_gene:At3g47570,CC_gene:TSJT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034827001~ Predicted protein~ At3g47110~ modules;original_location=join(4825278..4825410%2C4825534..4825614%2C4825694..4825858%2C4828464..4828741%2C4828824..4828944%2C4829134..4829255);owner=coffea | |
| 38250 chr10 manual_curation exon 4235792 4235924 . - . Parent=GSCOCT00034827001 | |
| 38251 chr10 manual_curation exon 4235588 4235668 . - . Parent=GSCOCT00034827001 | |
| 38252 chr10 manual_curation exon 4235344 4235508 . - . Parent=GSCOCT00034827001 | |
| 38253 chr10 manual_curation exon 4232461 4232738 . - . Parent=GSCOCT00034827001 | |
| 38254 chr10 manual_curation exon 4232258 4232378 . - . Parent=GSCOCT00034827001 | |
| 38255 chr10 manual_curation exon 4231947 4232068 . - . Parent=GSCOCT00034827001 | |
| 38256 chr10 manual_curation CDS 4235792 4235924 . - 0 Parent=GSCOCT00034827001 | |
| 38257 chr10 manual_curation CDS 4235588 4235668 . - 1 Parent=GSCOCT00034827001 | |
| 38258 chr10 manual_curation CDS 4235344 4235508 . - 1 Parent=GSCOCT00034827001 | |
| 38259 chr10 manual_curation CDS 4232461 4232738 . - 1 Parent=GSCOCT00034827001 | |
| 38260 chr10 manual_curation CDS 4232258 4232378 . - 0 Parent=GSCOCT00034827001 | |
| 38261 chr10 manual_curation CDS 4231947 4232068 . - 1 Parent=GSCOCT00034827001 | |
| 38262 chr10 manual_curation gene 4236479 4238137 . - . ID=GSCOCG00034825001;Name=Cc10_g05310 | |
| 38263 chr10 manual_curation mRNA 4236479 4238137 . - . ID=GSCOCT00034825001;Parent=GSCOCG00034825001;Name=Cc10_g05310 | |
| 38264 chr10 manual_curation polypeptide 4236479 4238137 . - . ID=GSCOCP00034825001;Dbxref=InterPro:IPR001611,PFAM:PF00560,SwissProt:C0LGW6,SwissProt:O49545,SwissProt:Q6XAT2,TAIR:AT2G15080.1,TAIR:AT5G07180.1,TAIR:AT5G62230.1,TrEMBL:B9SN90,TrEMBL:B9SN92,TrEMBL:I1K4C2;Derives_from=GSCOCT00034825001;Name=Cc10_g05310;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative LRR receptor-like serine/threonine-protein kinase ERL2,CC_functional_completeness:complete,CC_gene:ERL2,CC_gene:ERL1,CC_gene:BAM1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034825001~ Putative LRR receptor-like serine/threonine-protein kinase ERL2~ ERL2~ complete;original_location=join(4823065..4823084%2C4823357..4823589%2C4823648..4823815%2C4823976..4824223%2C4824292..4824402%2C4824529..4824723);owner=coffea | |
| 38265 chr10 manual_curation exon 4238118 4238137 . - . Parent=GSCOCT00034825001 | |
| 38266 chr10 manual_curation exon 4237613 4237845 . - . Parent=GSCOCT00034825001 | |
| 38267 chr10 manual_curation exon 4237387 4237554 . - . Parent=GSCOCT00034825001 | |
| 38268 chr10 manual_curation exon 4236979 4237226 . - . Parent=GSCOCT00034825001 | |
| 38269 chr10 manual_curation exon 4236800 4236910 . - . Parent=GSCOCT00034825001 | |
| 38270 chr10 manual_curation exon 4236479 4236673 . - . Parent=GSCOCT00034825001 | |
| 38271 chr10 manual_curation CDS 4238118 4238137 . - 0 Parent=GSCOCT00034825001 | |
| 38272 chr10 manual_curation CDS 4237613 4237845 . - 2 Parent=GSCOCT00034825001 | |
| 38273 chr10 manual_curation CDS 4237387 4237554 . - 1 Parent=GSCOCT00034825001 | |
| 38274 chr10 manual_curation CDS 4236979 4237226 . - 1 Parent=GSCOCT00034825001 | |
| 38275 chr10 manual_curation CDS 4236800 4236910 . - 0 Parent=GSCOCT00034825001 | |
| 38276 chr10 manual_curation CDS 4236479 4236673 . - 0 Parent=GSCOCT00034825001 | |
| 38277 chr10 manual_curation gene 4241805 4245288 . - . ID=GSCOCG00034824001;Name=Cc10_g05320 | |
| 38278 chr10 manual_curation mRNA 4241805 4245288 . - . ID=GSCOCT00034824001;Parent=GSCOCG00034824001;Name=Cc10_g05320 | |
| 38279 chr10 manual_curation polypeptide 4242521 4244916 . - . ID=GSCOCP00034824001;Dbxref=InterPro:IPR002100,InterPro:IPR002487,PFAM:PF00319,PFAM:PF01486,PRINTS:PR00404,PROFILE:PS50066,PROFILE:PS51297,PROSITE:PS00350,SMART:SM00432,SUPERFAMILY:SSF55455,SwissProt:Q2QW53,SwissProt:Q2V0P1,SwissProt:Q8VWM8,TAIR:AT1G22130.1,TAIR:AT1G77950.1,TAIR:AT1G77980.1,TrEMBL:A5BY19,TrEMBL:E0CPM9;Derives_from=GSCOCT00034824001;Name=Cc10_g05320;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0005634,GO:0043565,CC_EC_number:missing_EC_number,PRODUCT:Putative AGAMOUS-like 67,CC_functional_completeness:modules,CC_gene:MADS13,CC_gene:MADS58,CC_gene:M17;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034824001~ Putative AGAMOUS-like 67~ MADS13~ modules;original_location=join(4816286..4816470%2C4816626..4816679%2C4816835..4816850%2C4816970..4817031%2C4817167..4817194%2C4817316..4817377%2C4817623..4817722%2C4818047..4818192%2C4818332..4818561%2C4818629..4818681);owner=coffea | |
| 38280 chr10 manual_curation exon 4241805 4242045 . - . Parent=GSCOCT00034824001 | |
| 38281 chr10 manual_curation exon 4244732 4245288 . - . Parent=GSCOCT00034824001 | |
| 38282 chr10 manual_curation exon 4244523 4244576 . - . Parent=GSCOCT00034824001 | |
| 38283 chr10 manual_curation exon 4244352 4244367 . - . Parent=GSCOCT00034824001 | |
| 38284 chr10 manual_curation exon 4244171 4244232 . - . Parent=GSCOCT00034824001 | |
| 38285 chr10 manual_curation exon 4244008 4244035 . - . Parent=GSCOCT00034824001 | |
| 38286 chr10 manual_curation exon 4243825 4243886 . - . Parent=GSCOCT00034824001 | |
| 38287 chr10 manual_curation exon 4243480 4243579 . - . Parent=GSCOCT00034824001 | |
| 38288 chr10 manual_curation exon 4243010 4243155 . - . Parent=GSCOCT00034824001 | |
| 38289 chr10 manual_curation exon 4242641 4242870 . - . Parent=GSCOCT00034824001 | |
| 38290 chr10 manual_curation exon 4242476 4242573 . - . Parent=GSCOCT00034824001 | |
| 38291 chr10 manual_curation CDS 4244732 4244916 . - 0 Parent=GSCOCT00034824001 | |
| 38292 chr10 manual_curation CDS 4244523 4244576 . - 2 Parent=GSCOCT00034824001 | |
| 38293 chr10 manual_curation CDS 4244352 4244367 . - 2 Parent=GSCOCT00034824001 | |
| 38294 chr10 manual_curation CDS 4244171 4244232 . - 0 Parent=GSCOCT00034824001 | |
| 38295 chr10 manual_curation CDS 4244008 4244035 . - 2 Parent=GSCOCT00034824001 | |
| 38296 chr10 manual_curation CDS 4243825 4243886 . - 0 Parent=GSCOCT00034824001 | |
| 38297 chr10 manual_curation CDS 4243480 4243579 . - 2 Parent=GSCOCT00034824001 | |
| 38298 chr10 manual_curation CDS 4243010 4243155 . - 0 Parent=GSCOCT00034824001 | |
| 38299 chr10 manual_curation CDS 4242641 4242870 . - 2 Parent=GSCOCT00034824001 | |
| 38300 chr10 manual_curation CDS 4242521 4242573 . - 1 Parent=GSCOCT00034824001 | |
| 38301 chr10 manual_curation gene 4249410 4252186 . + . ID=GSCOCG00034822001;Name=Cc10_g05330 | |
| 38302 chr10 manual_curation mRNA 4249410 4252186 . + . ID=GSCOCT00034822001;Parent=GSCOCG00034822001;Name=Cc10_g05330 | |
| 38303 chr10 manual_curation polypeptide 4249410 4251849 . + . ID=GSCOCP00034822001;Dbxref=InterPro:IPR001841,PROFILE:PS50089,TAIR:AT2G38185.4,TAIR:AT2G38195.1,TAIR:AT5G01450.1,TrEMBL:A5BY20,TrEMBL:B9MVX8,TrEMBL:E0CP63;Derives_from=GSCOCT00034822001;Name=Cc10_g05330;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative RING/U-box superfamily protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034822001~ Putative RING/U-box superfamily protein~ unknown_gene~ modules;original_location=complement(join(4811565..4811792%2C4811224..4811413%2C4810850..4811076%2C4810678..4810774%2C4810514..4810585%2C4810167..4810387%2C4810007..4810076%2C4809517..4809811%2C4809353..4809431));owner=coffea | |
| 38304 chr10 manual_curation exon 4251771 4252186 . + . Parent=GSCOCT00034822001 | |
| 38305 chr10 manual_curation exon 4251391 4251685 . + . Parent=GSCOCT00034822001 | |
| 38306 chr10 manual_curation exon 4251126 4251195 . + . Parent=GSCOCT00034822001 | |
| 38307 chr10 manual_curation exon 4250815 4251035 . + . Parent=GSCOCT00034822001 | |
| 38308 chr10 manual_curation exon 4250617 4250688 . + . Parent=GSCOCT00034822001 | |
| 38309 chr10 manual_curation exon 4250428 4250524 . + . Parent=GSCOCT00034822001 | |
| 38310 chr10 manual_curation exon 4250126 4250352 . + . Parent=GSCOCT00034822001 | |
| 38311 chr10 manual_curation exon 4249789 4249978 . + . Parent=GSCOCT00034822001 | |
| 38312 chr10 manual_curation exon 4249410 4249637 . + . Parent=GSCOCT00034822001 | |
| 38313 chr10 manual_curation CDS 4251771 4251849 . + 2 Parent=GSCOCT00034822001 | |
| 38314 chr10 manual_curation CDS 4251391 4251685 . + 1 Parent=GSCOCT00034822001 | |
| 38315 chr10 manual_curation CDS 4251126 4251195 . + 0 Parent=GSCOCT00034822001 | |
| 38316 chr10 manual_curation CDS 4250815 4251035 . + 1 Parent=GSCOCT00034822001 | |
| 38317 chr10 manual_curation CDS 4250617 4250688 . + 1 Parent=GSCOCT00034822001 | |
| 38318 chr10 manual_curation CDS 4250428 4250524 . + 0 Parent=GSCOCT00034822001 | |
| 38319 chr10 manual_curation CDS 4250126 4250352 . + 1 Parent=GSCOCT00034822001 | |
| 38320 chr10 manual_curation CDS 4249789 4249978 . + 0 Parent=GSCOCT00034822001 | |
| 38321 chr10 manual_curation CDS 4249410 4249637 . + 0 Parent=GSCOCT00034822001 | |
| 38322 chr10 manual_curation gene 4252719 4254519 . + . ID=GSCOCG00034821001;Name=Cc10_g05340 | |
| 38323 chr10 manual_curation mRNA 4252719 4254519 . + . ID=GSCOCT00034821001;Parent=GSCOCG00034821001;Name=Cc10_g05340 | |
| 38324 chr10 manual_curation polypeptide 4252719 4254519 . + . ID=GSCOCP00034821001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:O65790,SwissProt:P93147,SwissProt:Q9FG65,TAIR:AT4G37320.1,TAIR:AT4G37340.1,TAIR:AT4G37370.1,TrEMBL:A5BY20,TrEMBL:B9R738,TrEMBL:F6GZP6;Derives_from=GSCOCT00034821001;Name=Cc10_g05340;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.89,PRODUCT:Putative Isoflavone 2'-hydroxylase,CC_functional_completeness:complete,CC_gene:CYP81E1,CC_gene:CYP81F1,CC_gene:CYP81D1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034821001~ Putative Isoflavone 2'-hydroxylase~ CYP81E1~ complete;original_location=complement(join(4807596..4808483%2C4806939..4807294%2C4806683..4806908));owner=coffea | |
| 38325 chr10 manual_curation exon 4254294 4254519 . + . Parent=GSCOCT00034821001 | |
| 38326 chr10 manual_curation exon 4253908 4254263 . + . Parent=GSCOCT00034821001 | |
| 38327 chr10 manual_curation exon 4252719 4253606 . + . Parent=GSCOCT00034821001 | |
| 38328 chr10 manual_curation CDS 4254294 4254519 . + 2 Parent=GSCOCT00034821001 | |
| 38329 chr10 manual_curation CDS 4253908 4254263 . + 0 Parent=GSCOCT00034821001 | |
| 38330 chr10 manual_curation CDS 4252719 4253606 . + 0 Parent=GSCOCT00034821001 | |
| 38331 chr10 manual_curation gene 4256933 4260141 . + . ID=GSCOCG00034820001;Name=Cc10_g05350 | |
| 38332 chr10 manual_curation mRNA 4256933 4260141 . + . ID=GSCOCT00034820001;Parent=GSCOCG00034820001;Name=Cc10_g05350 | |
| 38333 chr10 manual_curation polypeptide 4256933 4260141 . + . ID=GSCOCP00034820001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:O65790,SwissProt:P93147,SwissProt:Q9FG65,TAIR:AT4G37320.1,TAIR:AT4G37340.1,TAIR:AT4G37370.1,TrEMBL:A5BY20,TrEMBL:F6GZP6,TrEMBL:F6GZP7;Derives_from=GSCOCT00034820001;Name=Cc10_g05350;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.89,PRODUCT:Putative Isoflavone 2'-hydroxylase,CC_functional_completeness:complete,CC_gene:CYP81E1,CC_gene:CYP81F1,CC_gene:CYP81D1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034820001~ Putative Isoflavone 2'-hydroxylase~ CYP81E1~ complete;original_location=complement(join(4803373..4804269%2C4801061..4801681));owner=coffea | |
| 38334 chr10 manual_curation exon 4259521 4260141 . + . Parent=GSCOCT00034820001 | |
| 38335 chr10 manual_curation exon 4256933 4257829 . + . Parent=GSCOCT00034820001 | |
| 38336 chr10 manual_curation CDS 4259521 4260141 . + 0 Parent=GSCOCT00034820001 | |
| 38337 chr10 manual_curation CDS 4256933 4257829 . + 0 Parent=GSCOCT00034820001 | |
| 38338 chr10 manual_curation gene 4263677 4268445 . + . ID=GSCOCG00034818001;Name=Cc10_g05360 | |
| 38339 chr10 manual_curation mRNA 4263677 4268445 . + . ID=GSCOCT00034818001;Parent=GSCOCG00034818001;Name=Cc10_g05360 | |
| 38340 chr10 manual_curation polypeptide 4263944 4268316 . + . ID=GSCOCP00034818001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:O65790,SwissProt:P93147,SwissProt:Q9FG65,TAIR:AT1G66540.1,TAIR:AT4G37360.1,TAIR:AT4G37370.1,TrEMBL:A1XEH7,TrEMBL:A1XEH8,TrEMBL:B9R737;Derives_from=GSCOCT00034818001;Name=Cc10_g05360;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.89,PRODUCT:Putative Cytochrome P450 81D1,CC_functional_completeness:complete,CC_gene:CYP81D1,CC_gene:CYP81E1,CC_gene:CYP81F1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034818001~ Putative Cytochrome P450 81D1~ CYP81D1~ complete;original_location=complement(join(4796347..4797258%2C4794041..4794445%2C4792886..4793506));owner=coffea | |
| 38341 chr10 manual_curation exon 4267696 4268445 . + . Parent=GSCOCT00034818001 | |
| 38342 chr10 manual_curation exon 4266757 4267161 . + . Parent=GSCOCT00034818001 | |
| 38343 chr10 manual_curation exon 4263677 4264855 . + . Parent=GSCOCT00034818001 | |
| 38344 chr10 manual_curation CDS 4267696 4268316 . + 0 Parent=GSCOCT00034818001 | |
| 38345 chr10 manual_curation CDS 4266757 4267161 . + 0 Parent=GSCOCT00034818001 | |
| 38346 chr10 manual_curation CDS 4263944 4264855 . + 0 Parent=GSCOCT00034818001 | |
| 38347 chr10 manual_curation gene 4269973 4272061 . + . ID=GSCOCG00034816001;Name=Cc10_g05370 | |
| 38348 chr10 manual_curation mRNA 4269973 4272061 . + . ID=GSCOCT00034816001;Parent=GSCOCG00034816001;Name=Cc10_g05370 | |
| 38349 chr10 manual_curation polypeptide 4269973 4272061 . + . ID=GSCOCP00034816001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,SUPERFAMILY:SSF48264,SwissProt:O65790,SwissProt:P93147,SwissProt:Q9FG65,TAIR:AT1G66540.1,TAIR:AT3G28740.1,TAIR:AT4G37430.1,TrEMBL:A9ZT57,TrEMBL:B9MVY5,TrEMBL:F6GZP6;Derives_from=GSCOCT00034816001;Name=Cc10_g05370;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.89,PRODUCT:Putative Cytochrome P450 81F1,CC_functional_completeness:fragment,CC_gene:CYP81F1,CC_gene:CYP81D1,CC_gene:CYP81E1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034816001~ Putative Cytochrome P450 81F1~ CYP81F1~ fragment;original_location=complement(join(4791161..4791229%2C4790846..4790914%2C4789141..4789383));owner=coffea | |
| 38350 chr10 manual_curation exon 4271819 4272061 . + . Parent=GSCOCT00034816001 | |
| 38351 chr10 manual_curation exon 4270288 4270356 . + . Parent=GSCOCT00034816001 | |
| 38352 chr10 manual_curation exon 4269973 4270041 . + . Parent=GSCOCT00034816001 | |
| 38353 chr10 manual_curation CDS 4271819 4272061 . + 0 Parent=GSCOCT00034816001 | |
| 38354 chr10 manual_curation CDS 4270288 4270356 . + 0 Parent=GSCOCT00034816001 | |
| 38355 chr10 manual_curation CDS 4269973 4270041 . + 0 Parent=GSCOCT00034816001 | |
| 38356 chr10 manual_curation gene 4278770 4284956 . + . ID=GSCOCG00034815001;Name=Cc10_g05380 | |
| 38357 chr10 manual_curation mRNA 4278770 4284956 . + . ID=GSCOCT00034815001;Parent=GSCOCG00034815001;Name=Cc10_g05380 | |
| 38358 chr10 manual_curation polypeptide 4278770 4284693 . + . ID=GSCOCP00034815001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:O65790,SwissProt:P93147,SwissProt:Q9FG65,TAIR:AT4G37320.1,TAIR:AT4G37360.1,TAIR:AT4G37370.1,TrEMBL:A1XEH7,TrEMBL:A1XEH8,TrEMBL:D4P918;Derives_from=GSCOCT00034815001;Name=Cc10_g05380;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.89,PRODUCT:Putative Cytochrome P450 81D1,CC_functional_completeness:modules,CC_gene:CYP81D1,CC_gene:CYP81E1,CC_gene:CYP81F1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034815001~ Putative Cytochrome P450 81D1~ CYP81D1~ modules;original_location=complement(join(4782371..4782432%2C4782039..4782212%2C4779330..4779505%2C4777662..4778356%2C4776509..4777129));owner=coffea | |
| 38359 chr10 manual_curation exon 4284073 4284956 . + . Parent=GSCOCT00034815001 | |
| 38360 chr10 manual_curation exon 4282846 4283540 . + . Parent=GSCOCT00034815001 | |
| 38361 chr10 manual_curation exon 4281697 4281872 . + . Parent=GSCOCT00034815001 | |
| 38362 chr10 manual_curation exon 4278990 4279163 . + . Parent=GSCOCT00034815001 | |
| 38363 chr10 manual_curation exon 4278770 4278831 . + . Parent=GSCOCT00034815001 | |
| 38364 chr10 manual_curation CDS 4284073 4284693 . + 0 Parent=GSCOCT00034815001 | |
| 38365 chr10 manual_curation CDS 4282846 4283540 . + 1 Parent=GSCOCT00034815001 | |
| 38366 chr10 manual_curation CDS 4281697 4281872 . + 2 Parent=GSCOCT00034815001 | |
| 38367 chr10 manual_curation CDS 4278990 4279163 . + 2 Parent=GSCOCT00034815001 | |
| 38368 chr10 manual_curation CDS 4278770 4278831 . + 0 Parent=GSCOCT00034815001 | |
| 38369 chr10 manual_curation gene 4299955 4301780 . + . ID=GSCOCG00034810001;Name=Cc10_g05390 | |
| 38370 chr10 manual_curation mRNA 4299955 4301780 . + . ID=GSCOCT00034810001;Parent=GSCOCG00034810001;Name=Cc10_g05390 | |
| 38371 chr10 manual_curation polypeptide 4300164 4301780 . + . ID=GSCOCP00034810001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00463,SUPERFAMILY:SSF48264,SwissProt:O65790,SwissProt:P93147,SwissProt:Q9FG65,TAIR:AT2G23190.1,TAIR:AT4G37320.1,TAIR:AT4G37370.1,TrEMBL:A1XEH7,TrEMBL:A1XEH8,TrEMBL:F6GZP6;Derives_from=GSCOCT00034810001;Name=Cc10_g05390;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.89,PRODUCT:Putative Isoflavone 2'-hydroxylase,CC_functional_completeness:fragment,CC_gene:CYP81E1,CC_gene:CYP81F1,CC_gene:CYP81D1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034810001~ Putative Isoflavone 2'-hydroxylase~ CYP81E1~ fragment;original_location=complement(join(4760127..4761038%2C4759422..4759607));owner=coffea | |
| 38372 chr10 manual_curation exon 4301595 4301780 . + . Parent=GSCOCT00034810001 | |
| 38373 chr10 manual_curation exon 4299955 4301075 . + . Parent=GSCOCT00034810001 | |
| 38374 chr10 manual_curation CDS 4301595 4301780 . + 0 Parent=GSCOCT00034810001 | |
| 38375 chr10 manual_curation CDS 4300164 4301075 . + 0 Parent=GSCOCT00034810001 | |
| 38376 chr10 manual_curation gene 4307363 4309269 . + . ID=GSCOCG00034809001;Name=Cc10_g05400 | |
| 38377 chr10 manual_curation mRNA 4307363 4309269 . + . ID=GSCOCT00034809001;Parent=GSCOCG00034809001;Name=Cc10_g05400 | |
| 38378 chr10 manual_curation polypeptide 4307363 4309269 . + . ID=GSCOCP00034809001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:O65790,SwissProt:P93147,SwissProt:Q9FG65,TAIR:AT4G37370.1,TAIR:AT5G36220.1,TAIR:AT5G57220.1,TrEMBL:D4P918,TrEMBL:F6GZP6,TrEMBL:F6HXB2;Derives_from=GSCOCT00034809001;Name=Cc10_g05400;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.89,PRODUCT:Putative Isoflavone 2'-hydroxylase,CC_functional_completeness:complete,CC_gene:CYP81E1,CC_gene:CYP81D1,CC_gene:CYP81F1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034809001~ Putative Isoflavone 2'-hydroxylase~ CYP81E1~ complete;original_location=complement(join(4752949..4753839%2C4751933..4752577));owner=coffea | |
| 38379 chr10 manual_curation exon 4308625 4309269 . + . Parent=GSCOCT00034809001 | |
| 38380 chr10 manual_curation exon 4307363 4308253 . + . Parent=GSCOCT00034809001 | |
| 38381 chr10 manual_curation CDS 4308625 4309269 . + 0 Parent=GSCOCT00034809001 | |
| 38382 chr10 manual_curation CDS 4307363 4308253 . + 0 Parent=GSCOCT00034809001 | |
| 38383 chr10 manual_curation gene 4318442 4323146 . + . ID=GSCOCG00034808001;Name=Cc10_g05410 | |
| 38384 chr10 manual_curation mRNA 4318442 4323146 . + . ID=GSCOCT00034808001;Parent=GSCOCG00034808001;Name=Cc10_g05410 | |
| 38385 chr10 manual_curation polypeptide 4318442 4322493 . + . ID=GSCOCP00034808001;Dbxref=InterPro:IPR001046,PANTHER:PTHR11706,PFAM:PF01566,PRINTS:PR00447,SwissProt:Q2QN30,SwissProt:Q9C6B2,SwissProt:Q9SNV9,TAIR:AT1G47240.1,TAIR:AT2G23150.1,TAIR:AT5G67330.1,TIGRFAMs:TIGR01197,TrEMBL:F6GZP4,TrEMBL:G8A2C0,TrEMBL:I1JTP4;Derives_from=GSCOCT00034808001;Name=Cc10_g05410;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006810,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Metal transporter Nramp2,CC_functional_completeness:complete,CC_gene:NRAMP2,CC_gene:NRAMP3,CC_gene:NRAMP6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034808001~ Metal transporter Nramp2~ NRAMP2~ complete;original_location=complement(join(4742135..4742760%2C4740462..4741251%2C4738709..4738933));owner=coffea | |
| 38386 chr10 manual_curation exon 4322269 4323146 . + . Parent=GSCOCT00034808001 | |
| 38387 chr10 manual_curation exon 4319951 4320740 . + . Parent=GSCOCT00034808001 | |
| 38388 chr10 manual_curation exon 4318442 4319067 . + . Parent=GSCOCT00034808001 | |
| 38389 chr10 manual_curation CDS 4322269 4322493 . + 0 Parent=GSCOCT00034808001 | |
| 38390 chr10 manual_curation CDS 4319951 4320740 . + 2 Parent=GSCOCT00034808001 | |
| 38391 chr10 manual_curation CDS 4318442 4319067 . + 0 Parent=GSCOCT00034808001 | |
| 38392 chr10 manual_curation gene 4324522 4326300 . + . ID=GSCOCG00034807001;Name=Cc10_g05420 | |
| 38393 chr10 manual_curation mRNA 4324522 4326300 . + . ID=GSCOCT00034807001;Parent=GSCOCG00034807001;Name=Cc10_g05420 | |
| 38394 chr10 manual_curation polypeptide 4324522 4326204 . + . ID=GSCOCP00034807001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:O65790,SwissProt:P93147,SwissProt:Q9FG65,TAIR:AT4G37320.1,TAIR:AT4G37340.1,TAIR:AT4G37360.1,TrEMBL:B9R746,TrEMBL:F6HSX0,TrEMBL:F6HSX8;Derives_from=GSCOCT00034807001;Name=Cc10_g05420;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.89,PRODUCT:Putative Isoflavone 2'-hydroxylase,CC_functional_completeness:complete,CC_gene:CYP81E1,CC_gene:CYP81D1,CC_gene:CYP81F1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034807001~ Putative Isoflavone 2'-hydroxylase~ CYP81E1~ complete;original_location=complement(join(4735754..4736680%2C4734998..4735615));owner=coffea | |
| 38395 chr10 manual_curation exon 4325587 4326300 . + . Parent=GSCOCT00034807001 | |
| 38396 chr10 manual_curation exon 4324522 4325448 . + . Parent=GSCOCT00034807001 | |
| 38397 chr10 manual_curation CDS 4325587 4326204 . + 0 Parent=GSCOCT00034807001 | |
| 38398 chr10 manual_curation CDS 4324522 4325448 . + 0 Parent=GSCOCT00034807001 | |
| 38399 chr10 manual_curation gene 4327385 4329547 . + . ID=GSCOCG00034806001;Name=Cc10_g05430 | |
| 38400 chr10 manual_curation mRNA 4327385 4329547 . + . ID=GSCOCT00034806001;Parent=GSCOCG00034806001;Name=Cc10_g05430 | |
| 38401 chr10 manual_curation polypeptide 4327994 4329376 . + . ID=GSCOCP00034806001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:O65790,SwissProt:P93147,SwissProt:Q9FG65,TAIR:AT1G66540.1,TAIR:AT4G37330.1,TAIR:AT4G37360.1,TrEMBL:A5AJI9,TrEMBL:F6GZW4,TrEMBL:F6HSX8;Derives_from=GSCOCT00034806001;Name=Cc10_g05430;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.89,PRODUCT:Isoflavone 2'-hydroxylase,CC_functional_completeness:fragment,CC_gene:CYP81E1,CC_gene:CYP81F1,CC_gene:CYP81D1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034806001~ Isoflavone 2'-hydroxylase~ CYP81E1~ fragment;original_location=complement(join(4732855..4733208%2C4731826..4732446));owner=coffea | |
| 38402 chr10 manual_curation exon 4328756 4329547 . + . Parent=GSCOCT00034806001 | |
| 38403 chr10 manual_curation exon 4327385 4328347 . + . Parent=GSCOCT00034806001 | |
| 38404 chr10 manual_curation CDS 4328756 4329376 . + 0 Parent=GSCOCT00034806001 | |
| 38405 chr10 manual_curation CDS 4327994 4328347 . + 0 Parent=GSCOCT00034806001 | |
| 38406 chr10 manual_curation gene 4331254 4334811 . + . ID=GSCOCG00034805001;Name=Cc10_g05440 | |
| 38407 chr10 manual_curation mRNA 4331254 4334811 . + . ID=GSCOCT00034805001;Parent=GSCOCG00034805001;Name=Cc10_g05440 | |
| 38408 chr10 manual_curation polypeptide 4331254 4334811 . + . ID=GSCOCP00034805001;Dbxref=InterPro:IPR001046,PANTHER:PTHR11706,PFAM:PF01566,PRINTS:PR00447,SwissProt:Q2QN30,SwissProt:Q9C6B2,SwissProt:Q9SNV9,TAIR:AT1G47240.1,TAIR:AT2G23150.1,TAIR:AT5G67330.1,TIGRFAMs:TIGR01197,TrEMBL:D7KAQ2,TrEMBL:F6GZP4,TrEMBL:I1JTP4;Derives_from=GSCOCT00034805001;Name=Cc10_g05440;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006810,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Metal transporter Nramp2,CC_functional_completeness:complete,CC_gene:NRAMP2,CC_gene:NRAMP3,CC_gene:NRAMP6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034805001~ Metal transporter Nramp2~ NRAMP2~ complete;original_location=complement(join(4729362..4729948%2C4727525..4727661%2C4726778..4727430%2C4726391..4726618));owner=coffea | |
| 38409 chr10 manual_curation exon 4334584 4334811 . + . Parent=GSCOCT00034805001 | |
| 38410 chr10 manual_curation exon 4333772 4334424 . + . Parent=GSCOCT00034805001 | |
| 38411 chr10 manual_curation exon 4333541 4333677 . + . Parent=GSCOCT00034805001 | |
| 38412 chr10 manual_curation exon 4331254 4331840 . + . Parent=GSCOCT00034805001 | |
| 38413 chr10 manual_curation CDS 4334584 4334811 . + 0 Parent=GSCOCT00034805001 | |
| 38414 chr10 manual_curation CDS 4333772 4334424 . + 1 Parent=GSCOCT00034805001 | |
| 38415 chr10 manual_curation CDS 4333541 4333677 . + 2 Parent=GSCOCT00034805001 | |
| 38416 chr10 manual_curation CDS 4331254 4331840 . + 0 Parent=GSCOCT00034805001 | |
| 38417 chr10 manual_curation gene 4340050 4345719 . + . ID=GSCOCG00034804001;Name=Cc10_g05450 | |
| 38418 chr10 manual_curation mRNA 4340050 4345719 . + . ID=GSCOCT00034804001;Parent=GSCOCG00034804001;Name=Cc10_g05450 | |
| 38419 chr10 manual_curation polypeptide 4340050 4345719 . + . ID=GSCOCP00034804001;Dbxref=GENE3D:G3DSA:1.25.10.10,InterPro:IPR001313,InterPro:IPR011989,InterPro:IPR016024,PFAM:PF00806,PROFILE:PS50302,PROFILE:PS50303,SMART:SM00025,SUPERFAMILY:SSF48371,SwissProt:Q9C9R6,SwissProt:Q9LM20,SwissProt:Q9LVC3,TAIR:AT1G22240.1,TAIR:AT1G78160.1,TAIR:AT5G56510.1,TrEMBL:B9GNR9,TrEMBL:B9MVY6,TrEMBL:B9R735;Derives_from=GSCOCT00034804001;Name=Cc10_g05450;Ontology_term=CC_evidence_code:ISS,GO:0003723,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:Putative Predicted protein,CC_functional_completeness:complete,CC_gene:APUM12,CC_gene:APUM7,CC_gene:APUM8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034804001~ Putative Predicted protein~ APUM12~ complete;original_location=complement(join(4720137..4721152%2C4719860..4720022%2C4716268..4716431%2C4715899..4716157%2C4715483..4715602));owner=coffea | |
| 38420 chr10 manual_curation exon 4345600 4345719 . + . Parent=GSCOCT00034804001 | |
| 38421 chr10 manual_curation exon 4345045 4345303 . + . Parent=GSCOCT00034804001 | |
| 38422 chr10 manual_curation exon 4344771 4344934 . + . Parent=GSCOCT00034804001 | |
| 38423 chr10 manual_curation exon 4341180 4341342 . + . Parent=GSCOCT00034804001 | |
| 38424 chr10 manual_curation exon 4340050 4341065 . + . Parent=GSCOCT00034804001 | |
| 38425 chr10 manual_curation CDS 4345600 4345719 . + 0 Parent=GSCOCT00034804001 | |
| 38426 chr10 manual_curation CDS 4345045 4345303 . + 2 Parent=GSCOCT00034804001 | |
| 38427 chr10 manual_curation CDS 4344771 4344934 . + 0 Parent=GSCOCT00034804001 | |
| 38428 chr10 manual_curation CDS 4341180 4341342 . + 2 Parent=GSCOCT00034804001 | |
| 38429 chr10 manual_curation CDS 4340050 4341065 . + 0 Parent=GSCOCT00034804001 | |
| 38430 chr10 manual_curation gene 4346933 4348632 . - . ID=GSCOCG00034803001;Name=Cc10_g05460 | |
| 38431 chr10 manual_curation mRNA 4346933 4348632 . - . ID=GSCOCT00034803001;Parent=GSCOCG00034803001;Name=Cc10_g05460 | |
| 38432 chr10 manual_curation polypeptide 4348015 4348488 . - . ID=GSCOCP00034803001;Dbxref=InterPro:IPR003854,PFAM:PF02704,SwissProt:O80641,SwissProt:Q8LFM2,SwissProt:Q948Z4,TAIR:AT1G10588.1,TAIR:AT2G39540.1,TAIR:AT5G59845.1,TrEMBL:B9MVY8,TrEMBL:B9R733,TrEMBL:E0CP56;Derives_from=GSCOCT00034803001;Name=Cc10_g05460;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Snakin-1,CC_functional_completeness:complete,CC_gene:SN1,CC_gene:GASA10,CC_gene:At2g39540;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034803001~ Snakin-1~ SN1~ complete;original_location=join(4712714..4712795%2C4713003..4713187);owner=coffea | |
| 38433 chr10 manual_curation exon 4348407 4348632 . - . Parent=GSCOCT00034803001 | |
| 38434 chr10 manual_curation exon 4346933 4348199 . - . Parent=GSCOCT00034803001 | |
| 38435 chr10 manual_curation CDS 4348407 4348488 . - 0 Parent=GSCOCT00034803001 | |
| 38436 chr10 manual_curation CDS 4348015 4348199 . - 1 Parent=GSCOCT00034803001 | |
| 38437 chr10 manual_curation gene 4359816 4362834 . + . ID=GSCOCG00034802001;Name=Cc10_g05470 | |
| 38438 chr10 manual_curation mRNA 4359816 4362834 . + . ID=GSCOCT00034802001;Parent=GSCOCG00034802001;Name=Cc10_g05470 | |
| 38439 chr10 manual_curation polypeptide 4360066 4362417 . + . ID=GSCOCP00034802001;Dbxref=InterPro:IPR006873,PFAM:PF04788,TAIR:AT1G27690.1,TAIR:AT1G49840.1,TAIR:AT3G19540.1,TrEMBL:A5B9D3,TrEMBL:A5C1V9,TrEMBL:B9R732;Derives_from=GSCOCT00034802001;Name=Cc10_g05470;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF620),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034802001~ Protein of unknown function (DUF620)~ unknown_gene~ complete;original_location=complement(join(4700702..4701136%2C4699507..4699854%2C4698785..4699408));owner=coffea | |
| 38440 chr10 manual_curation exon 4361794 4362834 . + . Parent=GSCOCT00034802001 | |
| 38441 chr10 manual_curation exon 4361348 4361695 . + . Parent=GSCOCT00034802001 | |
| 38442 chr10 manual_curation exon 4359816 4360500 . + . Parent=GSCOCT00034802001 | |
| 38443 chr10 manual_curation CDS 4361794 4362417 . + 0 Parent=GSCOCT00034802001 | |
| 38444 chr10 manual_curation CDS 4361348 4361695 . + 0 Parent=GSCOCT00034802001 | |
| 38445 chr10 manual_curation CDS 4360066 4360500 . + 0 Parent=GSCOCT00034802001 | |
| 38446 chr10 manual_curation gene 4367001 4368891 . + . ID=GSCOCG00034801001;Name=Cc10_g05480 | |
| 38447 chr10 manual_curation mRNA 4367001 4368891 . + . ID=GSCOCT00034801001;Parent=GSCOCG00034801001;Name=Cc10_g05480 | |
| 38448 chr10 manual_curation polypeptide 4367732 4368670 . + . ID=GSCOCP00034801001;Dbxref=InterPro:IPR001810,InterPro:IPR022364,PFAM:PF00646,SUPERFAMILY:SSF81383,TAIR:AT4G08980.1,TrEMBL:A5BQB5,TrEMBL:F6GVX8,TrEMBL:F6I3L6;Derives_from=GSCOCT00034801001;Name=Cc10_g05480;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative F-BOX WITH WD-40 2,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034801001~ Putative F-BOX WITH WD-40 2~ unknown_gene~ fragment;original_location=complement(join(4693121..4693470%2C4692532..4693024));owner=coffea | |
| 38449 chr10 manual_curation exon 4367001 4367194 . + . Parent=GSCOCT00034801001 | |
| 38450 chr10 manual_curation exon 4368178 4368891 . + . Parent=GSCOCT00034801001 | |
| 38451 chr10 manual_curation exon 4367717 4368081 . + . Parent=GSCOCT00034801001 | |
| 38452 chr10 manual_curation CDS 4368178 4368670 . + 2 Parent=GSCOCT00034801001 | |
| 38453 chr10 manual_curation CDS 4367732 4368081 . + 0 Parent=GSCOCT00034801001 | |
| 38454 chr10 manual_curation gene 4371760 4373656 . + . ID=GSCOCG00034800001;Name=Cc10_g05490 | |
| 38455 chr10 manual_curation mRNA 4371760 4373656 . + . ID=GSCOCT00034800001;Parent=GSCOCG00034800001;Name=Cc10_g05490 | |
| 38456 chr10 manual_curation polypeptide 4371760 4373656 . + . ID=GSCOCP00034800001;Dbxref=GENE3D:G3DSA:1.25.10.10,GENE3D:G3DSA:1.25.40.10,InterPro:IPR000225,InterPro:IPR011989,InterPro:IPR011990,InterPro:IPR016024,SMART:SM00185,SUPERFAMILY:SSF48371,SwissProt:Q3ZBR5,SwissProt:Q99614,TAIR:AT3G50030.1,TAIR:AT5G10200.1,TAIR:AT5G43120.1,TrEMBL:A5B9D4,TrEMBL:B9R731,TrEMBL:F6GZP0;Derives_from=GSCOCT00034800001;Name=Cc10_g05490;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:ARM-repeat/Tetratricopeptide repeat (TPR)-like protein,CC_functional_completeness:complete,CC_gene:TTC1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034800001~ ARM-repeat/Tetratricopeptide repeat (TPR)-like protein~ TTC1~ complete;original_location=complement(join(4687780..4689442%2C4687546..4687646));owner=coffea | |
| 38457 chr10 manual_curation exon 4373556 4373656 . + . Parent=GSCOCT00034800001 | |
| 38458 chr10 manual_curation exon 4371760 4373422 . + . Parent=GSCOCT00034800001 | |
| 38459 chr10 manual_curation CDS 4373556 4373656 . + 1 Parent=GSCOCT00034800001 | |
| 38460 chr10 manual_curation CDS 4371760 4373422 . + 0 Parent=GSCOCT00034800001 | |
| 38461 chr10 manual_curation gene 4375034 4376639 . + . ID=GSCOCG00034799001;Name=Cc10_g05500 | |
| 38462 chr10 manual_curation mRNA 4375034 4376639 . + . ID=GSCOCT00034799001;Parent=GSCOCG00034799001;Name=Cc10_g05500 | |
| 38463 chr10 manual_curation polypeptide 4375158 4376457 . + . ID=GSCOCP00034799001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR016040,SwissProt:O74913,TAIR:AT4G24220.1,TAIR:AT5G58750.1,TrEMBL:B9R730,TrEMBL:F6GZN9,TrEMBL:G8A2A9;Derives_from=GSCOCT00034799001;Name=Cc10_g05500;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,CC_EC_number:missing_EC_number,PRODUCT:NAD(P)-binding Rossmann-fold superfamily protein,CC_functional_completeness:complete,CC_gene:SPCC757.02c;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034799001~ NAD(P)-binding Rossmann-fold superfamily protein~ SPCC757.02c~ complete;original_location=complement(join(4686002..4686044%2C4684958..4685868%2C4684745..4684903));owner=coffea | |
| 38464 chr10 manual_curation exon 4376299 4376639 . + . Parent=GSCOCT00034799001 | |
| 38465 chr10 manual_curation exon 4375334 4376244 . + . Parent=GSCOCT00034799001 | |
| 38466 chr10 manual_curation exon 4375034 4375200 . + . Parent=GSCOCT00034799001 | |
| 38467 chr10 manual_curation CDS 4376299 4376457 . + 0 Parent=GSCOCT00034799001 | |
| 38468 chr10 manual_curation CDS 4375334 4376244 . + 1 Parent=GSCOCT00034799001 | |
| 38469 chr10 manual_curation CDS 4375158 4375200 . + 0 Parent=GSCOCT00034799001 | |
| 38470 chr10 manual_curation gene 4380561 4382130 . + . ID=GSCOCG00034798001;Name=Cc10_g05510 | |
| 38471 chr10 manual_curation mRNA 4380561 4382130 . + . ID=GSCOCT00034798001;Parent=GSCOCG00034798001;Name=Cc10_g05510 | |
| 38472 chr10 manual_curation polypeptide 4380561 4382130 . + . ID=GSCOCP00034798001;Dbxref=SwissProt:O74913,TAIR:AT4G24220.1,TAIR:AT5G58750.1,TrEMBL:B9MVZ3,TrEMBL:B9R730,TrEMBL:D2JSQ9;Derives_from=GSCOCT00034798001;Name=Cc10_g05510;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:NAD(P)-binding Rossmann-fold superfamily protein,CC_functional_completeness:complete,CC_gene:SPCC757.02c;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034798001~ NAD(P)-binding Rossmann-fold superfamily protein~ SPCC757.02c~ complete;original_location=complement(join(4680612..4680641%2C4679072..4680202));owner=coffea | |
| 38473 chr10 manual_curation exon 4381000 4382130 . + . Parent=GSCOCT00034798001 | |
| 38474 chr10 manual_curation exon 4380561 4380590 . + . Parent=GSCOCT00034798001 | |
| 38475 chr10 manual_curation CDS 4381000 4382130 . + 0 Parent=GSCOCT00034798001 | |
| 38476 chr10 manual_curation CDS 4380561 4380590 . + 0 Parent=GSCOCT00034798001 | |
| 38477 chr10 manual_curation gene 4384398 4387387 . + . ID=GSCOCG00034797001;Name=Cc10_g05520 | |
| 38478 chr10 manual_curation mRNA 4384398 4387387 . + . ID=GSCOCT00034797001;Parent=GSCOCG00034797001;Name=Cc10_g05520 | |
| 38479 chr10 manual_curation polypeptide 4384423 4387154 . + . ID=GSCOCP00034797001;Derives_from=GSCOCT00034797001;Name=Cc10_g05520;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034797001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(4676740..4676779%2C4676527..4676571%2C4674270..4674302%2C4674048..4674178));owner=coffea | |
| 38480 chr10 manual_curation exon 4387024 4387387 . + . Parent=GSCOCT00034797001 | |
| 38481 chr10 manual_curation exon 4386900 4386932 . + . Parent=GSCOCT00034797001 | |
| 38482 chr10 manual_curation exon 4384631 4384675 . + . Parent=GSCOCT00034797001 | |
| 38483 chr10 manual_curation exon 4384398 4384462 . + . Parent=GSCOCT00034797001 | |
| 38484 chr10 manual_curation CDS 4387024 4387154 . + 1 Parent=GSCOCT00034797001 | |
| 38485 chr10 manual_curation CDS 4386900 4386932 . + 1 Parent=GSCOCT00034797001 | |
| 38486 chr10 manual_curation CDS 4384631 4384675 . + 1 Parent=GSCOCT00034797001 | |
| 38487 chr10 manual_curation CDS 4384423 4384462 . + 0 Parent=GSCOCT00034797001 | |
| 38488 chr10 manual_curation gene 4387536 4389285 . - . ID=GSCOCG00034796001;Name=Cc10_g05530 | |
| 38489 chr10 manual_curation mRNA 4387536 4389285 . - . ID=GSCOCT00034796001;Parent=GSCOCG00034796001;Name=Cc10_g05530 | |
| 38490 chr10 manual_curation polypeptide 4387820 4388137 . - . ID=GSCOCP00034796001;Derives_from=GSCOCT00034796001;Name=Cc10_g05530;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034796001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=4673065..4673382;owner=coffea | |
| 38491 chr10 manual_curation exon 4387536 4389285 . - . Parent=GSCOCT00034796001 | |
| 38492 chr10 manual_curation CDS 4387820 4388137 . - 0 Parent=GSCOCT00034796001 | |
| 38493 chr10 manual_curation gene 4389344 4394312 . - . ID=GSCOCG00034795001;Name=Cc10_g05540 | |
| 38494 chr10 manual_curation mRNA 4389344 4394312 . - . ID=GSCOCT00034795001;Parent=GSCOCG00034795001;Name=Cc10_g05540 | |
| 38495 chr10 manual_curation polypeptide 4389505 4393216 . - . ID=GSCOCP00034795001;Dbxref=InterPro:IPR010989,InterPro:IPR015260,PFAM:PF09177,SUPERFAMILY:SSF47661,TAIR:AT1G27700.1,TAIR:AT2G18860.1,TAIR:AT4G30240.1,TrEMBL:A5B9D8,TrEMBL:B9R728,TrEMBL:E0CP49;Derives_from=GSCOCT00034795001;Name=Cc10_g05540;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0016020,GO:0016192,GO:0048193,CC_EC_number:missing_EC_number,PRODUCT:Putative Syntaxin/t-SNARE family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034795001~ Putative Syntaxin/t-SNARE family protein~ unknown_gene~ complete;original_location=join(4667986..4668062%2C4668267..4668381%2C4668649..4669296%2C4669400..4669583%2C4671672..4671697);owner=coffea | |
| 38496 chr10 manual_curation exon 4393140 4394312 . - . Parent=GSCOCT00034795001 | |
| 38497 chr10 manual_curation exon 4392821 4392935 . - . Parent=GSCOCT00034795001 | |
| 38498 chr10 manual_curation exon 4391906 4392553 . - . Parent=GSCOCT00034795001 | |
| 38499 chr10 manual_curation exon 4391619 4391802 . - . Parent=GSCOCT00034795001 | |
| 38500 chr10 manual_curation exon 4389344 4389530 . - . Parent=GSCOCT00034795001 | |
| 38501 chr10 manual_curation CDS 4393140 4393216 . - 0 Parent=GSCOCT00034795001 | |
| 38502 chr10 manual_curation CDS 4392821 4392935 . - 2 Parent=GSCOCT00034795001 | |
| 38503 chr10 manual_curation CDS 4391906 4392553 . - 0 Parent=GSCOCT00034795001 | |
| 38504 chr10 manual_curation CDS 4391619 4391802 . - 0 Parent=GSCOCT00034795001 | |
| 38505 chr10 manual_curation CDS 4389505 4389530 . - 1 Parent=GSCOCT00034795001 | |
| 38506 chr10 manual_curation gene 4398324 4400907 . + . ID=GSCOCG00034793001;Name=Cc10_g05550 | |
| 38507 chr10 manual_curation mRNA 4398324 4400907 . + . ID=GSCOCT00034793001;Parent=GSCOCG00034793001;Name=Cc10_g05550 | |
| 38508 chr10 manual_curation polypeptide 4398407 4400714 . + . ID=GSCOCP00034793001;Dbxref=GENE3D:G3DSA:1.25.40.20,InterPro:IPR002110,InterPro:IPR020683,PFAM:PF00023,PROFILE:PS50088,PROFILE:PS50297,SMART:SM00248,SUPERFAMILY:SSF48403,SwissProt:P0CQ68,SwissProt:P0CQ69,SwissProt:Q10170,TAIR:AT5G65860.1,TrEMBL:B9MW00,TrEMBL:B9R727,TrEMBL:F6GZN8;Derives_from=GSCOCT00034793001;Name=Cc10_g05550;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.1.1.2,PRODUCT:Putative Arginine N-methyltransferase 2,CC_functional_completeness:complete,CC_gene:rmt2,CC_gene:RMT2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034793001~ Putative Arginine N-methyltransferase 2~ rmt2~ complete;original_location=complement(join(4662522..4662795%2C4661562..4661957%2C4660488..4660801));owner=coffea | |
| 38509 chr10 manual_curation exon 4400401 4400907 . + . Parent=GSCOCT00034793001 | |
| 38510 chr10 manual_curation exon 4399245 4399640 . + . Parent=GSCOCT00034793001 | |
| 38511 chr10 manual_curation exon 4398324 4398680 . + . Parent=GSCOCT00034793001 | |
| 38512 chr10 manual_curation CDS 4400401 4400714 . + 1 Parent=GSCOCT00034793001 | |
| 38513 chr10 manual_curation CDS 4399245 4399640 . + 1 Parent=GSCOCT00034793001 | |
| 38514 chr10 manual_curation CDS 4398407 4398680 . + 0 Parent=GSCOCT00034793001 | |
| 38515 chr10 manual_curation gene 4402892 4406748 . - . ID=GSCOCG00034792001;Name=Cc10_g05560 | |
| 38516 chr10 manual_curation mRNA 4402892 4406748 . - . ID=GSCOCT00034792001;Parent=GSCOCG00034792001;Name=Cc10_g05560 | |
| 38517 chr10 manual_curation polypeptide 4402988 4406748 . - . ID=GSCOCP00034792001;Dbxref=GENE3D:G3DSA:1.20.80.10,InterPro:IPR000582,InterPro:IPR014352,PANTHER:PTHR23310,PFAM:PF00887,PROFILE:PS51228,SUPERFAMILY:SSF47027,SwissProt:Q9SM23,SwissProt:Q9STP8,SwissProt:Q9STX1,TAIR:AT4G24230.6,TAIR:AT4G27780.1,TAIR:AT5G53470.1,TrEMBL:B9MW02,TrEMBL:E2IFU9,TrEMBL:F6GZN5;Derives_from=GSCOCT00034792001;Name=Cc10_g05560;Ontology_term=CC_evidence_code:ISS,GO:0000062,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:ACBP3,CC_gene:ACBP2,CC_gene:ACBP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034792001~ Hypothetical protein~ ACBP3~ missing_functional_completeness;original_location=join(4654454..4654747%2C4654841..4655943%2C4656738..4656843%2C4656930..4657036%2C4658190..4658214);owner=coffea | |
| 38518 chr10 manual_curation exon 4406455 4406748 . - . Parent=GSCOCT00034792001 | |
| 38519 chr10 manual_curation exon 4405259 4406361 . - . Parent=GSCOCT00034792001 | |
| 38520 chr10 manual_curation exon 4404359 4404464 . - . Parent=GSCOCT00034792001 | |
| 38521 chr10 manual_curation exon 4404166 4404272 . - . Parent=GSCOCT00034792001 | |
| 38522 chr10 manual_curation exon 4402892 4403012 . - . Parent=GSCOCT00034792001 | |
| 38523 chr10 manual_curation CDS 4406455 4406748 . - 0 Parent=GSCOCT00034792001 | |
| 38524 chr10 manual_curation CDS 4405259 4406361 . - 0 Parent=GSCOCT00034792001 | |
| 38525 chr10 manual_curation CDS 4404359 4404464 . - 2 Parent=GSCOCT00034792001 | |
| 38526 chr10 manual_curation CDS 4404166 4404272 . - 0 Parent=GSCOCT00034792001 | |
| 38527 chr10 manual_curation CDS 4402988 4403012 . - 2 Parent=GSCOCT00034792001 | |
| 38528 chr10 manual_curation gene 4413650 4416522 . + . ID=GSCOCG00034791001;Name=Cc10_g05570 | |
| 38529 chr10 manual_curation mRNA 4413650 4416522 . + . ID=GSCOCT00034791001;Parent=GSCOCG00034791001;Name=Cc10_g05570 | |
| 38530 chr10 manual_curation polypeptide 4413976 4415847 . + . ID=GSCOCP00034791001;Dbxref=InterPro:IPR007513,PFAM:PF04419,SwissProt:O64818,TAIR:AT2G23090.1,TrEMBL:C7G0W0,TrEMBL:D8SNI3,TrEMBL:Q9ZRV8;Derives_from=GSCOCT00034791001;Name=Cc10_g05570;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterized protein At2g23090,CC_functional_completeness:complete,CC_gene:At2g23090;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034791001~ Uncharacterized protein At2g23090~ At2g23090~ complete;original_location=complement(join(4647151..4647226%2C4646949..4646989%2C4645355..4645474));owner=coffea | |
| 38531 chr10 manual_curation exon 4415728 4416522 . + . Parent=GSCOCT00034791001 | |
| 38532 chr10 manual_curation exon 4414213 4414253 . + . Parent=GSCOCT00034791001 | |
| 38533 chr10 manual_curation exon 4413650 4414051 . + . Parent=GSCOCT00034791001 | |
| 38534 chr10 manual_curation CDS 4415728 4415847 . + 0 Parent=GSCOCT00034791001 | |
| 38535 chr10 manual_curation CDS 4414213 4414253 . + 1 Parent=GSCOCT00034791001 | |
| 38536 chr10 manual_curation CDS 4413976 4414051 . + 0 Parent=GSCOCT00034791001 | |
| 38537 chr10 manual_curation gene 4416835 4422631 . - . ID=GSCOCG00034790001;Name=Cc10_g05580 | |
| 38538 chr10 manual_curation mRNA 4416835 4422631 . - . ID=GSCOCT00034790001;Parent=GSCOCG00034790001;Name=Cc10_g05580 | |
| 38539 chr10 manual_curation polypeptide 4417132 4422391 . - . ID=GSCOCP00034790001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:P28523,TAIR:AT2G23080.1,TrEMBL:A5BCW7,TrEMBL:B9GYR0,TrEMBL:E0CP43;Derives_from=GSCOCT00034790001;Name=Cc10_g05580;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.23,PRODUCT:Casein kinase II subunit alpha,CC_functional_completeness:complete,CC_gene:CKA2,CC_gene:CKA1,CC_gene:ACK2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034790001~ Casein kinase II subunit alpha~ CKA2~ complete;original_location=join(4638811..4638896%2C4639944..4640073%2C4640622..4640816%2C4641847..4642004%2C4642151..4642241%2C4642327..4642392%2C4643044..4643126%2C4643259..4643322%2C4643423..4643491%2C4644011..4644070);owner=coffea | |
| 38540 chr10 manual_curation exon 4422306 4422631 . - . Parent=GSCOCT00034790001 | |
| 38541 chr10 manual_curation exon 4421129 4421258 . - . Parent=GSCOCT00034790001 | |
| 38542 chr10 manual_curation exon 4420386 4420580 . - . Parent=GSCOCT00034790001 | |
| 38543 chr10 manual_curation exon 4419198 4419355 . - . Parent=GSCOCT00034790001 | |
| 38544 chr10 manual_curation exon 4418961 4419051 . - . Parent=GSCOCT00034790001 | |
| 38545 chr10 manual_curation exon 4418810 4418875 . - . Parent=GSCOCT00034790001 | |
| 38546 chr10 manual_curation exon 4418076 4418158 . - . Parent=GSCOCT00034790001 | |
| 38547 chr10 manual_curation exon 4417880 4417943 . - . Parent=GSCOCT00034790001 | |
| 38548 chr10 manual_curation exon 4417711 4417779 . - . Parent=GSCOCT00034790001 | |
| 38549 chr10 manual_curation exon 4416835 4417191 . - . Parent=GSCOCT00034790001 | |
| 38550 chr10 manual_curation CDS 4422306 4422391 . - 0 Parent=GSCOCT00034790001 | |
| 38551 chr10 manual_curation CDS 4421129 4421258 . - 2 Parent=GSCOCT00034790001 | |
| 38552 chr10 manual_curation CDS 4420386 4420580 . - 0 Parent=GSCOCT00034790001 | |
| 38553 chr10 manual_curation CDS 4419198 4419355 . - 0 Parent=GSCOCT00034790001 | |
| 38554 chr10 manual_curation CDS 4418961 4419051 . - 2 Parent=GSCOCT00034790001 | |
| 38555 chr10 manual_curation CDS 4418810 4418875 . - 0 Parent=GSCOCT00034790001 | |
| 38556 chr10 manual_curation CDS 4418076 4418158 . - 0 Parent=GSCOCT00034790001 | |
| 38557 chr10 manual_curation CDS 4417880 4417943 . - 2 Parent=GSCOCT00034790001 | |
| 38558 chr10 manual_curation CDS 4417711 4417779 . - 0 Parent=GSCOCT00034790001 | |
| 38559 chr10 manual_curation CDS 4417132 4417191 . - 0 Parent=GSCOCT00034790001 | |
| 38560 chr10 manual_curation gene 4429942 4437682 . - . ID=GSCOCG00034789001;Name=Cc10_g05590 | |
| 38561 chr10 manual_curation mRNA 4429942 4437682 . - . ID=GSCOCT00034789001;Parent=GSCOCG00034789001;Name=Cc10_g05590 | |
| 38562 chr10 manual_curation polypeptide 4430128 4437483 . - . ID=GSCOCP00034789001;Dbxref=InterPro:IPR007900,InterPro:IPR022003,PFAM:PF05236,PFAM:PF12174,TAIR:AT1G27720.1,TAIR:AT5G43130.2,TrEMBL:B9IBU8,TrEMBL:B9R722,TrEMBL:F6GZN3;Derives_from=GSCOCT00034789001;Name=Cc10_g05590;Ontology_term=CC_evidence_code:ISS,GO:0005669,GO:0006352,GO:0016986,CC_EC_number:missing_EC_number,PRODUCT:Putative TBP-associated factor 4,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034789001~ Putative TBP-associated factor 4~ unknown_gene~ complete;original_location=join(4623719..4623757%2C4623849..4623954%2C4624752..4624957%2C4625045..4625371%2C4625471..4625566%2C4625684..4625774%2C4625869..4626662%2C4628132..4628265%2C4628411..4628498%2C4628644..4628779%2C4628902..4628957%2C4629069..4629125%2C4629239..4629379%2C4629471..4629536%2C4629617..4629875%2C4630902..4631074);owner=coffea | |
| 38563 chr10 manual_curation exon 4437445 4437682 . - . Parent=GSCOCT00034789001 | |
| 38564 chr10 manual_curation exon 4437248 4437353 . - . Parent=GSCOCT00034789001 | |
| 38565 chr10 manual_curation exon 4436245 4436450 . - . Parent=GSCOCT00034789001 | |
| 38566 chr10 manual_curation exon 4435831 4436157 . - . Parent=GSCOCT00034789001 | |
| 38567 chr10 manual_curation exon 4435636 4435731 . - . Parent=GSCOCT00034789001 | |
| 38568 chr10 manual_curation exon 4435428 4435518 . - . Parent=GSCOCT00034789001 | |
| 38569 chr10 manual_curation exon 4434540 4435333 . - . Parent=GSCOCT00034789001 | |
| 38570 chr10 manual_curation exon 4432937 4433070 . - . Parent=GSCOCT00034789001 | |
| 38571 chr10 manual_curation exon 4432704 4432791 . - . Parent=GSCOCT00034789001 | |
| 38572 chr10 manual_curation exon 4432423 4432558 . - . Parent=GSCOCT00034789001 | |
| 38573 chr10 manual_curation exon 4432245 4432300 . - . Parent=GSCOCT00034789001 | |
| 38574 chr10 manual_curation exon 4432077 4432133 . - . Parent=GSCOCT00034789001 | |
| 38575 chr10 manual_curation exon 4431823 4431963 . - . Parent=GSCOCT00034789001 | |
| 38576 chr10 manual_curation exon 4431666 4431731 . - . Parent=GSCOCT00034789001 | |
| 38577 chr10 manual_curation exon 4431327 4431585 . - . Parent=GSCOCT00034789001 | |
| 38578 chr10 manual_curation exon 4429942 4430300 . - . Parent=GSCOCT00034789001 | |
| 38579 chr10 manual_curation CDS 4437445 4437483 . - 0 Parent=GSCOCT00034789001 | |
| 38580 chr10 manual_curation CDS 4437248 4437353 . - 0 Parent=GSCOCT00034789001 | |
| 38581 chr10 manual_curation CDS 4436245 4436450 . - 1 Parent=GSCOCT00034789001 | |
| 38582 chr10 manual_curation CDS 4435831 4436157 . - 0 Parent=GSCOCT00034789001 | |
| 38583 chr10 manual_curation CDS 4435636 4435731 . - 0 Parent=GSCOCT00034789001 | |
| 38584 chr10 manual_curation CDS 4435428 4435518 . - 0 Parent=GSCOCT00034789001 | |
| 38585 chr10 manual_curation CDS 4434540 4435333 . - 1 Parent=GSCOCT00034789001 | |
| 38586 chr10 manual_curation CDS 4432937 4433070 . - 0 Parent=GSCOCT00034789001 | |
| 38587 chr10 manual_curation CDS 4432704 4432791 . - 2 Parent=GSCOCT00034789001 | |
| 38588 chr10 manual_curation CDS 4432423 4432558 . - 0 Parent=GSCOCT00034789001 | |
| 38589 chr10 manual_curation CDS 4432245 4432300 . - 1 Parent=GSCOCT00034789001 | |
| 38590 chr10 manual_curation CDS 4432077 4432133 . - 0 Parent=GSCOCT00034789001 | |
| 38591 chr10 manual_curation CDS 4431823 4431963 . - 0 Parent=GSCOCT00034789001 | |
| 38592 chr10 manual_curation CDS 4431666 4431731 . - 0 Parent=GSCOCT00034789001 | |
| 38593 chr10 manual_curation CDS 4431327 4431585 . - 0 Parent=GSCOCT00034789001 | |
| 38594 chr10 manual_curation CDS 4430128 4430300 . - 1 Parent=GSCOCT00034789001 | |
| 38595 chr10 manual_curation gene 4438721 4441044 . + . ID=GSCOCG00034788001;Name=Cc10_g05600 | |
| 38596 chr10 manual_curation mRNA 4438721 4441044 . + . ID=GSCOCT00034788001;Parent=GSCOCG00034788001;Name=Cc10_g05600 | |
| 38597 chr10 manual_curation polypeptide 4438936 4440681 . + . ID=GSCOCP00034788001;Dbxref=InterPro:IPR007248,PANTHER:PTHR11266,PFAM:PF04117,SwissProt:Q4IPX8,SwissProt:Q54FR4,SwissProt:Q7SCY7,TAIR:AT2G14860.1,TAIR:AT4G33905.1,TAIR:AT5G43140.1,TrEMBL:B9S2Q7,TrEMBL:D7MQ04,TrEMBL:F6GZN2;Derives_from=GSCOCT00034788001;Name=Cc10_g05600;Ontology_term=CC_evidence_code:ISS,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein SYM1,CC_functional_completeness:modules,CC_gene:SYM1,CC_gene:sym-1,CC_gene:DDB_G0290631;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034788001~ Putative Protein SYM1~ SYM1~ modules;original_location=complement(join(4621904..4622266%2C4621251..4621479%2C4620750..4620874%2C4620521..4620604));owner=coffea | |
| 38598 chr10 manual_curation exon 4440598 4441044 . + . Parent=GSCOCT00034788001 | |
| 38599 chr10 manual_curation exon 4440328 4440452 . + . Parent=GSCOCT00034788001 | |
| 38600 chr10 manual_curation exon 4439723 4439951 . + . Parent=GSCOCT00034788001 | |
| 38601 chr10 manual_curation exon 4438721 4439298 . + . Parent=GSCOCT00034788001 | |
| 38602 chr10 manual_curation CDS 4440598 4440681 . + 0 Parent=GSCOCT00034788001 | |
| 38603 chr10 manual_curation CDS 4440328 4440452 . + 1 Parent=GSCOCT00034788001 | |
| 38604 chr10 manual_curation CDS 4439723 4439951 . + 0 Parent=GSCOCT00034788001 | |
| 38605 chr10 manual_curation CDS 4438936 4439298 . + 0 Parent=GSCOCT00034788001 | |
| 38606 chr10 manual_curation gene 4443379 4445475 . + . ID=GSCOCG00034787001;Name=Cc10_g05610 | |
| 38607 chr10 manual_curation mRNA 4443379 4445475 . + . ID=GSCOCT00034787001;Parent=GSCOCG00034787001;Name=Cc10_g05610 | |
| 38608 chr10 manual_curation polypeptide 4443666 4445140 . + . ID=GSCOCP00034787001;Dbxref=TAIR:AT5G43150.1,TrEMBL:B9R721,TrEMBL:C6SVK1,TrEMBL:C6TFH0;Derives_from=GSCOCT00034787001;Name=Cc10_g05610;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034787001~ Putative Uncharacterized protein~ unknown_gene~ complete;original_location=complement(join(4617455..4617536%2C4616062..4616252));owner=coffea | |
| 38609 chr10 manual_curation exon 4443379 4443510 . + . Parent=GSCOCT00034787001 | |
| 38610 chr10 manual_curation exon 4444950 4445475 . + . Parent=GSCOCT00034787001 | |
| 38611 chr10 manual_curation exon 4443628 4443747 . + . Parent=GSCOCT00034787001 | |
| 38612 chr10 manual_curation CDS 4444950 4445140 . + 1 Parent=GSCOCT00034787001 | |
| 38613 chr10 manual_curation CDS 4443666 4443747 . + 0 Parent=GSCOCT00034787001 | |
| 38614 chr10 manual_curation gene 4447947 4450036 . + . ID=GSCOCG00034786001;Name=Cc10_g05620 | |
| 38615 chr10 manual_curation mRNA 4447947 4450036 . + . ID=GSCOCT00034786001;Parent=GSCOCG00034786001;Name=Cc10_g05620 | |
| 38616 chr10 manual_curation polypeptide 4448057 4449797 . + . ID=GSCOCP00034786001;Dbxref=InterPro:IPR001944,PANTHER:PTHR23421,TrEMBL:B9IBU6,TrEMBL:E0CP39,TrEMBL:I1M8S7;Derives_from=GSCOCT00034786001;Name=Cc10_g05620;Ontology_term=CC_evidence_code:ISS,GO:0005975,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034786001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=complement(join(4613046..4613145%2C4611790..4611851%2C4611405..4611596));owner=coffea | |
| 38617 chr10 manual_curation exon 4449606 4450036 . + . Parent=GSCOCT00034786001 | |
| 38618 chr10 manual_curation exon 4449351 4449412 . + . Parent=GSCOCT00034786001 | |
| 38619 chr10 manual_curation exon 4447947 4448156 . + . Parent=GSCOCT00034786001 | |
| 38620 chr10 manual_curation CDS 4449606 4449797 . + 0 Parent=GSCOCT00034786001 | |
| 38621 chr10 manual_curation CDS 4449351 4449412 . + 1 Parent=GSCOCT00034786001 | |
| 38622 chr10 manual_curation CDS 4448057 4448156 . + 0 Parent=GSCOCT00034786001 | |
| 38623 chr10 manual_curation gene 4459050 4465171 . + . ID=GSCOCG00034785001;Name=Cc10_g05630 | |
| 38624 chr10 manual_curation mRNA 4459050 4465171 . + . ID=GSCOCT00034785001;Parent=GSCOCG00034785001;Name=Cc10_g05630 | |
| 38625 chr10 manual_curation polypeptide 4459552 4464813 . + . ID=GSCOCP00034785001;Dbxref=InterPro:IPR007573,PFAM:PF04484,TAIR:AT1G49890.1,TAIR:AT2G24070.1,TAIR:AT3G19570.2,TrEMBL:B9R717,TrEMBL:F6GZN0,TrEMBL:F6H666;Derives_from=GSCOCT00034785001;Name=Cc10_g05630;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Family of unknown function (DUF566) ,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034785001~ Putative Family of unknown function (DUF566) ~ unknown_gene~ complete;original_location=complement(join(4601595..4601650%2C4600160..4601561%2C4598349..4598468%2C4597678..4597794%2C4597460..4597549%2C4596635..4596742%2C4596389..4596463));owner=coffea | |
| 38626 chr10 manual_curation exon 4464739 4465171 . + . Parent=GSCOCT00034785001 | |
| 38627 chr10 manual_curation exon 4464460 4464567 . + . Parent=GSCOCT00034785001 | |
| 38628 chr10 manual_curation exon 4463653 4463742 . + . Parent=GSCOCT00034785001 | |
| 38629 chr10 manual_curation exon 4463408 4463524 . + . Parent=GSCOCT00034785001 | |
| 38630 chr10 manual_curation exon 4462734 4462853 . + . Parent=GSCOCT00034785001 | |
| 38631 chr10 manual_curation exon 4459641 4461042 . + . Parent=GSCOCT00034785001 | |
| 38632 chr10 manual_curation exon 4459050 4459607 . + . Parent=GSCOCT00034785001 | |
| 38633 chr10 manual_curation CDS 4464739 4464813 . + 0 Parent=GSCOCT00034785001 | |
| 38634 chr10 manual_curation CDS 4464460 4464567 . + 0 Parent=GSCOCT00034785001 | |
| 38635 chr10 manual_curation CDS 4463653 4463742 . + 0 Parent=GSCOCT00034785001 | |
| 38636 chr10 manual_curation CDS 4463408 4463524 . + 0 Parent=GSCOCT00034785001 | |
| 38637 chr10 manual_curation CDS 4462734 4462853 . + 0 Parent=GSCOCT00034785001 | |
| 38638 chr10 manual_curation CDS 4459641 4461042 . + 2 Parent=GSCOCT00034785001 | |
| 38639 chr10 manual_curation CDS 4459552 4459607 . + 0 Parent=GSCOCT00034785001 | |
| 38640 chr10 manual_curation gene 4472077 4473084 . - . ID=GSCOCG00034784001;Name=Cc10_g05640 | |
| 38641 chr10 manual_curation mRNA 4472077 4473084 . - . ID=GSCOCT00034784001;Parent=GSCOCG00034784001;Name=Cc10_g05640 | |
| 38642 chr10 manual_curation polypeptide 4472282 4472987 . - . ID=GSCOCP00034784001;Dbxref=InterPro:IPR004883,PFAM:PF03195,PROFILE:PS50891,SwissProt:Q9FN11,SwissProt:Q9SN23,SwissProt:Q9SZE8,TAIR:AT3G49940.1,TAIR:AT4G37540.1,TAIR:AT5G67420.1,TrEMBL:B9IBU3,TrEMBL:B9R716,TrEMBL:E0CP37;Derives_from=GSCOCT00034784001;Name=Cc10_g05640;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:LBD37,CC_gene:LBD38,CC_gene:LBD39;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034784001~ Putative uncharacterized protein~ LBD37~ complete;original_location=join(4588215..4588398%2C4588508..4588920);owner=coffea | |
| 38643 chr10 manual_curation exon 4472804 4473084 . - . Parent=GSCOCT00034784001 | |
| 38644 chr10 manual_curation exon 4472077 4472694 . - . Parent=GSCOCT00034784001 | |
| 38645 chr10 manual_curation CDS 4472804 4472987 . - 0 Parent=GSCOCT00034784001 | |
| 38646 chr10 manual_curation CDS 4472282 4472694 . - 1 Parent=GSCOCT00034784001 | |
| 38647 chr10 manual_curation gene 4482028 4483439 . - . ID=GSCOCG00034783001;Name=Cc10_g05650 | |
| 38648 chr10 manual_curation mRNA 4482028 4483439 . - . ID=GSCOCT00034783001;Parent=GSCOCG00034783001;Name=Cc10_g05650 | |
| 38649 chr10 manual_curation polypeptide 4482379 4483146 . - . ID=GSCOCP00034783001;Dbxref=InterPro:IPR007087,InterPro:IPR015880,PROFILE:PS50157,PROSITE:PS00028,SMART:SM00355,SwissProt:O22533,SwissProt:Q42430,SwissProt:Q96289,TAIR:AT1G27730.1,TAIR:AT5G04340.1,TAIR:AT5G43170.1,TrEMBL:I0AW24,TrEMBL:Q5TJD4,TrEMBL:Q71AU8;Derives_from=GSCOCT00034783001;Name=Cc10_g05650;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Zinc finger protein ZAT10,CC_functional_completeness:complete,CC_gene:ZAT10,CC_gene:ZAT6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034783001~ Zinc finger protein ZAT10~ ZAT10~ complete;original_location=4578056..4578823;owner=coffea | |
| 38650 chr10 manual_curation exon 4482028 4483439 . - . Parent=GSCOCT00034783001 | |
| 38651 chr10 manual_curation CDS 4482379 4483146 . - 0 Parent=GSCOCT00034783001 | |
| 38652 chr10 manual_curation gene 4489256 4491402 . + . ID=GSCOCG00034782001;Name=Cc10_g05660 | |
| 38653 chr10 manual_curation mRNA 4489256 4491402 . + . ID=GSCOCT00034782001;Parent=GSCOCG00034782001;Name=Cc10_g05660 | |
| 38654 chr10 manual_curation polypeptide 4489393 4491033 . + . ID=GSCOCP00034782001;Dbxref=InterPro:IPR005351,PANTHER:PTHR13193,PFAM:PF03669,PRODOM:PD073147,SwissProt:Q9SD88,TAIR:AT5G07960.1,TrEMBL:D7M0P0,TrEMBL:D7SI29,TrEMBL:Q0WU11;Derives_from=GSCOCT00034782001;Name=Cc10_g05660;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein Asterix,CC_functional_completeness:complete,CC_gene:At5g07960;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034782001~ Protein Asterix~ At5g07960~ complete;original_location=complement(join(4571660..4571809%2C4571443..4571543%2C4570169..4570235));owner=coffea | |
| 38655 chr10 manual_curation exon 4490967 4491402 . + . Parent=GSCOCT00034782001 | |
| 38656 chr10 manual_curation exon 4489659 4489759 . + . Parent=GSCOCT00034782001 | |
| 38657 chr10 manual_curation exon 4489256 4489542 . + . Parent=GSCOCT00034782001 | |
| 38658 chr10 manual_curation CDS 4490967 4491033 . + 2 Parent=GSCOCT00034782001 | |
| 38659 chr10 manual_curation CDS 4489659 4489759 . + 0 Parent=GSCOCT00034782001 | |
| 38660 chr10 manual_curation CDS 4489393 4489542 . + 0 Parent=GSCOCT00034782001 | |
| 38661 chr10 manual_curation gene 4493564 4498313 . + . ID=GSCOCG00034780001;Name=Cc10_g05670 | |
| 38662 chr10 manual_curation mRNA 4493564 4498313 . + . ID=GSCOCT00034780001;Parent=GSCOCG00034780001;Name=Cc10_g05670 | |
| 38663 chr10 manual_curation polypeptide 4493830 4497898 . + . ID=GSCOCP00034780001;Dbxref=HAMAP:MF_00004,InterPro:IPR000836,InterPro:IPR005764,PFAM:PF00156,SwissProt:P31166,SwissProt:Q42563,SwissProt:Q43199,TAIR:AT1G27450.3,TAIR:AT4G12440.2,TAIR:AT4G22570.1,TIGRFAMs:TIGR01090,TrEMBL:C6SWN0,TrEMBL:I1K855,TrEMBL:Q2V997;Derives_from=GSCOCT00034780001;Name=Cc10_g05670;Ontology_term=CC_evidence_code:ISS,GO:0003999,GO:0005737,GO:0006168,GO:0009116,CC_EC_number:2.4.2.7,PRODUCT:Adenine phosphoribosyltransferase 1%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:APT1,CC_gene:APT2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034780001~ Adenine phosphoribosyltransferase 1%2C chloroplastic~ APT1~ fragment;original_location=complement(join(4567174..4567372%2C4566184..4566276%2C4564820..4564969%2C4564031..4564089%2C4563304..4563351));owner=coffea | |
| 38664 chr10 manual_curation exon 4497851 4498313 . + . Parent=GSCOCT00034780001 | |
| 38665 chr10 manual_curation exon 4497113 4497171 . + . Parent=GSCOCT00034780001 | |
| 38666 chr10 manual_curation exon 4496233 4496382 . + . Parent=GSCOCT00034780001 | |
| 38667 chr10 manual_curation exon 4494926 4495018 . + . Parent=GSCOCT00034780001 | |
| 38668 chr10 manual_curation exon 4493564 4494028 . + . Parent=GSCOCT00034780001 | |
| 38669 chr10 manual_curation CDS 4497851 4497898 . + 0 Parent=GSCOCT00034780001 | |
| 38670 chr10 manual_curation CDS 4497113 4497171 . + 1 Parent=GSCOCT00034780001 | |
| 38671 chr10 manual_curation CDS 4496233 4496382 . + 1 Parent=GSCOCT00034780001 | |
| 38672 chr10 manual_curation CDS 4494926 4495018 . + 1 Parent=GSCOCT00034780001 | |
| 38673 chr10 manual_curation CDS 4493830 4494028 . + 0 Parent=GSCOCT00034780001 | |
| 38674 chr10 manual_curation gene 4507835 4509397 . + . ID=GSCOCG00034779001;Name=Cc10_g05680 | |
| 38675 chr10 manual_curation mRNA 4507835 4509397 . + . ID=GSCOCT00034779001;Parent=GSCOCG00034779001;Name=Cc10_g05680 | |
| 38676 chr10 manual_curation polypeptide 4507835 4509397 . + . ID=GSCOCP00034779001;Dbxref=InterPro:IPR001092,InterPro:IPR011598,PFAM:PF00010,PROFILE:PS50888,SMART:SM00353,SUPERFAMILY:SSF47459,SwissProt:Q7XHI9,SwissProt:Q84WK0,SwissProt:Q8LEG1,TAIR:AT1G27740.1,TAIR:AT2G14760.3,TAIR:AT4G33880.1,TrEMBL:A5B2R9,TrEMBL:B9GNQ2,TrEMBL:B9HMZ0;Derives_from=GSCOCT00034779001;Name=Cc10_g05680;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0030528,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:BHLH85,CC_gene:BHLH84,CC_gene:BHLH54;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034779001~ Putative uncharacterized protein~ BHLH85~ complete;original_location=complement(join(4552747..4553367%2C4552377..4552631%2C4552201..4552266%2C4552008..4552073%2C4551805..4551897));owner=coffea | |
| 38677 chr10 manual_curation exon 4509305 4509397 . + . Parent=GSCOCT00034779001 | |
| 38678 chr10 manual_curation exon 4509129 4509194 . + . Parent=GSCOCT00034779001 | |
| 38679 chr10 manual_curation exon 4508936 4509001 . + . Parent=GSCOCT00034779001 | |
| 38680 chr10 manual_curation exon 4508571 4508825 . + . Parent=GSCOCT00034779001 | |
| 38681 chr10 manual_curation exon 4507835 4508455 . + . Parent=GSCOCT00034779001 | |
| 38682 chr10 manual_curation CDS 4509305 4509397 . + 0 Parent=GSCOCT00034779001 | |
| 38683 chr10 manual_curation CDS 4509129 4509194 . + 0 Parent=GSCOCT00034779001 | |
| 38684 chr10 manual_curation CDS 4508936 4509001 . + 0 Parent=GSCOCT00034779001 | |
| 38685 chr10 manual_curation CDS 4508571 4508825 . + 0 Parent=GSCOCT00034779001 | |
| 38686 chr10 manual_curation CDS 4507835 4508455 . + 0 Parent=GSCOCT00034779001 | |
| 38687 chr10 manual_curation gene 4513912 4524040 . + . ID=GSCOCG00034778001;Name=Cc10_g05690 | |
| 38688 chr10 manual_curation mRNA 4513912 4524040 . + . ID=GSCOCT00034778001;Parent=GSCOCG00034778001;Name=Cc10_g05690 | |
| 38689 chr10 manual_curation polypeptide 4513912 4523554 . + . ID=GSCOCP00034778001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR012677,InterPro:IPR012921,PFAM:PF00076,PFAM:PF07744,PROFILE:PS50102,SMART:SM00360,TAIR:AT1G27750.1,TrEMBL:B9IBS2,TrEMBL:F6GZM6,TrEMBL:I1M8T3;Derives_from=GSCOCT00034778001;Name=Cc10_g05690;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,CC_EC_number:missing_EC_number,PRODUCT:Putative nucleic acid binding,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034778001~ Putative nucleic acid binding~ unknown_gene~ modules;original_location=complement(join(4546957..4547290%2C4545306..4546045%2C4542805..4543030%2C4542476..4542681%2C4541776..4542397%2C4541352..4541556%2C4540186..4540397%2C4539366..4540041%2C4539203..4539284%2C4538321..4538368%2C4537648..4537851));owner=coffea | |
| 38690 chr10 manual_curation exon 4523351 4524040 . + . Parent=GSCOCT00034778001 | |
| 38691 chr10 manual_curation exon 4522834 4522881 . + . Parent=GSCOCT00034778001 | |
| 38692 chr10 manual_curation exon 4521918 4521999 . + . Parent=GSCOCT00034778001 | |
| 38693 chr10 manual_curation exon 4521161 4521836 . + . Parent=GSCOCT00034778001 | |
| 38694 chr10 manual_curation exon 4520805 4521016 . + . Parent=GSCOCT00034778001 | |
| 38695 chr10 manual_curation exon 4519646 4519850 . + . Parent=GSCOCT00034778001 | |
| 38696 chr10 manual_curation exon 4518805 4519426 . + . Parent=GSCOCT00034778001 | |
| 38697 chr10 manual_curation exon 4518521 4518726 . + . Parent=GSCOCT00034778001 | |
| 38698 chr10 manual_curation exon 4518172 4518397 . + . Parent=GSCOCT00034778001 | |
| 38699 chr10 manual_curation exon 4515157 4515896 . + . Parent=GSCOCT00034778001 | |
| 38700 chr10 manual_curation exon 4513912 4514245 . + . Parent=GSCOCT00034778001 | |
| 38701 chr10 manual_curation CDS 4523351 4523554 . + 0 Parent=GSCOCT00034778001 | |
| 38702 chr10 manual_curation CDS 4522834 4522881 . + 0 Parent=GSCOCT00034778001 | |
| 38703 chr10 manual_curation CDS 4521918 4521999 . + 2 Parent=GSCOCT00034778001 | |
| 38704 chr10 manual_curation CDS 4521161 4521836 . + 1 Parent=GSCOCT00034778001 | |
| 38705 chr10 manual_curation CDS 4520805 4521016 . + 2 Parent=GSCOCT00034778001 | |
| 38706 chr10 manual_curation CDS 4519646 4519850 . + 1 Parent=GSCOCT00034778001 | |
| 38707 chr10 manual_curation CDS 4518805 4519426 . + 0 Parent=GSCOCT00034778001 | |
| 38708 chr10 manual_curation CDS 4518521 4518726 . + 1 Parent=GSCOCT00034778001 | |
| 38709 chr10 manual_curation CDS 4518172 4518397 . + 0 Parent=GSCOCT00034778001 | |
| 38710 chr10 manual_curation CDS 4515157 4515896 . + 1 Parent=GSCOCT00034778001 | |
| 38711 chr10 manual_curation CDS 4513912 4514245 . + 0 Parent=GSCOCT00034778001 | |
| 38712 chr10 manual_curation gene 4526538 4533456 . + . ID=GSCOCG00034777001;Name=Cc10_g05700 | |
| 38713 chr10 manual_curation mRNA 4526538 4533456 . + . ID=GSCOCT00034777001;Parent=GSCOCG00034777001;Name=Cc10_g05700 | |
| 38714 chr10 manual_curation polypeptide 4526538 4533229 . + . ID=GSCOCP00034777001;Dbxref=InterPro:IPR003892,PFAM:PF02845,PROFILE:PS51140,SMART:SM00546,TAIR:AT1G27752.1,TrEMBL:B9IBS2,TrEMBL:D3YBC7,TrEMBL:I1JTQ4;Derives_from=GSCOCT00034777001;Name=Cc10_g05700;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Ubiquitin system component Cue protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034777001~ Ubiquitin system component Cue protein~ unknown_gene~ complete;original_location=complement(join(4534217..4534664%2C4533637..4533796%2C4533478..4533539%2C4533009..4533103%2C4532188..4532301%2C4531279..4531344%2C4530787..4530884%2C4529535..4529974%2C4527973..4529036));owner=coffea | |
| 38715 chr10 manual_curation exon 4532166 4533456 . + . Parent=GSCOCT00034777001 | |
| 38716 chr10 manual_curation exon 4531228 4531667 . + . Parent=GSCOCT00034777001 | |
| 38717 chr10 manual_curation exon 4530318 4530415 . + . Parent=GSCOCT00034777001 | |
| 38718 chr10 manual_curation exon 4529858 4529923 . + . Parent=GSCOCT00034777001 | |
| 38719 chr10 manual_curation exon 4528901 4529014 . + . Parent=GSCOCT00034777001 | |
| 38720 chr10 manual_curation exon 4528099 4528193 . + . Parent=GSCOCT00034777001 | |
| 38721 chr10 manual_curation exon 4527663 4527724 . + . Parent=GSCOCT00034777001 | |
| 38722 chr10 manual_curation exon 4527406 4527565 . + . Parent=GSCOCT00034777001 | |
| 38723 chr10 manual_curation exon 4526538 4526985 . + . Parent=GSCOCT00034777001 | |
| 38724 chr10 manual_curation CDS 4532166 4533229 . + 1 Parent=GSCOCT00034777001 | |
| 38725 chr10 manual_curation CDS 4531228 4531667 . + 2 Parent=GSCOCT00034777001 | |
| 38726 chr10 manual_curation CDS 4530318 4530415 . + 0 Parent=GSCOCT00034777001 | |
| 38727 chr10 manual_curation CDS 4529858 4529923 . + 0 Parent=GSCOCT00034777001 | |
| 38728 chr10 manual_curation CDS 4528901 4529014 . + 0 Parent=GSCOCT00034777001 | |
| 38729 chr10 manual_curation CDS 4528099 4528193 . + 1 Parent=GSCOCT00034777001 | |
| 38730 chr10 manual_curation CDS 4527663 4527724 . + 2 Parent=GSCOCT00034777001 | |
| 38731 chr10 manual_curation CDS 4527406 4527565 . + 1 Parent=GSCOCT00034777001 | |
| 38732 chr10 manual_curation CDS 4526538 4526985 . + 0 Parent=GSCOCT00034777001 | |
| 38733 chr10 manual_curation gene 4537012 4541739 . - . ID=GSCOCG00034776001;Name=Cc10_g05710 | |
| 38734 chr10 manual_curation mRNA 4537012 4541739 . - . ID=GSCOCT00034776001;Parent=GSCOCG00034776001;Name=Cc10_g05710 | |
| 38735 chr10 manual_curation polypeptide 4537303 4541392 . - . ID=GSCOCP00034776001;Dbxref=InterPro:IPR006921,InterPro:IPR007701,PFAM:PF04836,PFAM:PF05004,SwissProt:O00458,SwissProt:P19182,SwissProt:Q5S1U6,TAIR:AT1G27760.3,TrEMBL:B9IBS1,TrEMBL:B9R711,TrEMBL:F6H1A4;Derives_from=GSCOCT00034776001;Name=Cc10_g05710;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Interferon-related developmental regulator 1,CC_functional_completeness:complete,CC_gene:IFRD1,CC_gene:Ifrd1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034776001~ Putative Interferon-related developmental regulator 1~ IFRD1~ complete;original_location=join(4519810..4519819%2C4520491..4520659%2C4520799..4520879%2C4521332..4521414%2C4521494..4521609%2C4521711..4521821%2C4522087..4522196%2C4522297..4522606%2C4522706..4522783%2C4522860..4522910%2C4523044..4523133%2C4523500..4523577%2C4523852..4523899);owner=coffea | |
| 38736 chr10 manual_curation exon 4541383 4541739 . - . Parent=GSCOCT00034776001 | |
| 38737 chr10 manual_curation exon 4540543 4540711 . - . Parent=GSCOCT00034776001 | |
| 38738 chr10 manual_curation exon 4540323 4540403 . - . Parent=GSCOCT00034776001 | |
| 38739 chr10 manual_curation exon 4539788 4539870 . - . Parent=GSCOCT00034776001 | |
| 38740 chr10 manual_curation exon 4539593 4539708 . - . Parent=GSCOCT00034776001 | |
| 38741 chr10 manual_curation exon 4539381 4539491 . - . Parent=GSCOCT00034776001 | |
| 38742 chr10 manual_curation exon 4539006 4539115 . - . Parent=GSCOCT00034776001 | |
| 38743 chr10 manual_curation exon 4538596 4538905 . - . Parent=GSCOCT00034776001 | |
| 38744 chr10 manual_curation exon 4538419 4538496 . - . Parent=GSCOCT00034776001 | |
| 38745 chr10 manual_curation exon 4538292 4538342 . - . Parent=GSCOCT00034776001 | |
| 38746 chr10 manual_curation exon 4538069 4538158 . - . Parent=GSCOCT00034776001 | |
| 38747 chr10 manual_curation exon 4537625 4537702 . - . Parent=GSCOCT00034776001 | |
| 38748 chr10 manual_curation exon 4537012 4537350 . - . Parent=GSCOCT00034776001 | |
| 38749 chr10 manual_curation CDS 4541383 4541392 . - 0 Parent=GSCOCT00034776001 | |
| 38750 chr10 manual_curation CDS 4540543 4540711 . - 1 Parent=GSCOCT00034776001 | |
| 38751 chr10 manual_curation CDS 4540323 4540403 . - 2 Parent=GSCOCT00034776001 | |
| 38752 chr10 manual_curation CDS 4539788 4539870 . - 2 Parent=GSCOCT00034776001 | |
| 38753 chr10 manual_curation CDS 4539593 4539708 . - 1 Parent=GSCOCT00034776001 | |
| 38754 chr10 manual_curation CDS 4539381 4539491 . - 0 Parent=GSCOCT00034776001 | |
| 38755 chr10 manual_curation CDS 4539006 4539115 . - 0 Parent=GSCOCT00034776001 | |
| 38756 chr10 manual_curation CDS 4538596 4538905 . - 2 Parent=GSCOCT00034776001 | |
| 38757 chr10 manual_curation CDS 4538419 4538496 . - 0 Parent=GSCOCT00034776001 | |
| 38758 chr10 manual_curation CDS 4538292 4538342 . - 0 Parent=GSCOCT00034776001 | |
| 38759 chr10 manual_curation CDS 4538069 4538158 . - 0 Parent=GSCOCT00034776001 | |
| 38760 chr10 manual_curation CDS 4537625 4537702 . - 0 Parent=GSCOCT00034776001 | |
| 38761 chr10 manual_curation CDS 4537303 4537350 . - 0 Parent=GSCOCT00034776001 | |
| 38762 chr10 manual_curation gene 4568787 4570269 . + . ID=GSCOCG00034774001;Name=Cc10_g05720 | |
| 38763 chr10 manual_curation mRNA 4568787 4570269 . + . ID=GSCOCT00034774001;Parent=GSCOCG00034774001;Name=Cc10_g05720 | |
| 38764 chr10 manual_curation polypeptide 4568787 4570269 . + . ID=GSCOCP00034774001;Dbxref=GENE3D:G3DSA:1.10.472.10,InterPro:IPR006670,InterPro:IPR006671,InterPro:IPR011028,InterPro:IPR013763,InterPro:IPR015451,PANTHER:PTHR10177:SF12,PFAM:PF00134,PROSITE:PS00292,SMART:SM00385,SUPERFAMILY:SSF47954,SwissProt:P42753,SwissProt:Q0DQA9,SwissProt:Q10QA2,TAIR:AT1G70210.1,TAIR:AT4G34160.1,TAIR:AT4G37630.1,TrEMBL:B9R710,TrEMBL:E0CP30,TrEMBL:G9BZV2;Derives_from=GSCOCT00034774001;Name=Cc10_g05720;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Cyclin-D5-3,CC_functional_completeness:complete,CC_gene:CYCD5-1,CC_gene:CYCD5-3,CC_gene:CYCD3-1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034774001~ Putative Cyclin-D5-3~ CYCD5-1~ complete;original_location=complement(join(4492143..4492415%2C4491933..4492019%2C4491475..4491766%2C4491250..4491383%2C4490933..4491154));owner=coffea | |
| 38765 chr10 manual_curation exon 4570048 4570269 . + . Parent=GSCOCT00034774001 | |
| 38766 chr10 manual_curation exon 4569819 4569952 . + . Parent=GSCOCT00034774001 | |
| 38767 chr10 manual_curation exon 4569436 4569727 . + . Parent=GSCOCT00034774001 | |
| 38768 chr10 manual_curation exon 4569183 4569269 . + . Parent=GSCOCT00034774001 | |
| 38769 chr10 manual_curation exon 4568787 4569059 . + . Parent=GSCOCT00034774001 | |
| 38770 chr10 manual_curation CDS 4570048 4570269 . + 0 Parent=GSCOCT00034774001 | |
| 38771 chr10 manual_curation CDS 4569819 4569952 . + 1 Parent=GSCOCT00034774001 | |
| 38772 chr10 manual_curation CDS 4569436 4569727 . + 0 Parent=GSCOCT00034774001 | |
| 38773 chr10 manual_curation CDS 4569183 4569269 . + 0 Parent=GSCOCT00034774001 | |
| 38774 chr10 manual_curation CDS 4568787 4569059 . + 0 Parent=GSCOCT00034774001 | |
| 38775 chr10 manual_curation gene 4572933 4579317 . - . ID=GSCOCG00034773001;Name=Cc10_g05730 | |
| 38776 chr10 manual_curation mRNA 4572933 4579317 . - . ID=GSCOCT00034773001;Parent=GSCOCG00034773001;Name=Cc10_g05730 | |
| 38777 chr10 manual_curation polypeptide 4573404 4578925 . - . ID=GSCOCP00034773001;Dbxref=InterPro:IPR000695,InterPro:IPR001757,InterPro:IPR004014,InterPro:IPR005834,InterPro:IPR006068,InterPro:IPR006408,InterPro:IPR008250,InterPro:IPR018303,PANTHER:PTHR11939,PFAM:PF00122,PFAM:PF00689,PFAM:PF00690,PFAM:PF00702,PRINTS:PR00119,PRINTS:PR00120,PROSITE:PS00154,SwissProt:O81108,SwissProt:Q2QMX9,SwissProt:Q37145,TAIR:AT1G27770.1,TAIR:AT2G22950.1,TAIR:AT4G37640.1,TIGRFAMs:TIGR01494,TIGRFAMs:TIGR01517,TrEMBL:D3YBB1,TrEMBL:I1K861,TrEMBL:Q9FVE7;Derives_from=GSCOCT00034773001;Name=Cc10_g05730;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005388,GO:0005524,GO:0006754,GO:0006812,GO:0006816,GO:0008152,GO:0015085,GO:0016020,CC_EC_number:3.6.3.8,PRODUCT:Calcium-transporting ATPase 1%2C chloroplastic,CC_functional_completeness:complete,CC_gene:ACA1,CC_gene:Os12g0586600,CC_gene:ACA2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034773001~ Calcium-transporting ATPase 1%2C chloroplastic~ ACA1~ complete;original_location=join(4482277..4482453%2C4483139..4483193%2C4483321..4485251%2C4485628..4485786%2C4486451..4486622%2C4486738..4487036%2C4487550..4487798);owner=coffea | |
| 38778 chr10 manual_curation exon 4578749 4579317 . - . Parent=GSCOCT00034773001 | |
| 38779 chr10 manual_curation exon 4578009 4578063 . - . Parent=GSCOCT00034773001 | |
| 38780 chr10 manual_curation exon 4575951 4577881 . - . Parent=GSCOCT00034773001 | |
| 38781 chr10 manual_curation exon 4575416 4575574 . - . Parent=GSCOCT00034773001 | |
| 38782 chr10 manual_curation exon 4574580 4574751 . - . Parent=GSCOCT00034773001 | |
| 38783 chr10 manual_curation exon 4574166 4574464 . - . Parent=GSCOCT00034773001 | |
| 38784 chr10 manual_curation exon 4572933 4573652 . - . Parent=GSCOCT00034773001 | |
| 38785 chr10 manual_curation CDS 4578749 4578925 . - 0 Parent=GSCOCT00034773001 | |
| 38786 chr10 manual_curation CDS 4578009 4578063 . - 0 Parent=GSCOCT00034773001 | |
| 38787 chr10 manual_curation CDS 4575951 4577881 . - 1 Parent=GSCOCT00034773001 | |
| 38788 chr10 manual_curation CDS 4575416 4575574 . - 0 Parent=GSCOCT00034773001 | |
| 38789 chr10 manual_curation CDS 4574580 4574751 . - 0 Parent=GSCOCT00034773001 | |
| 38790 chr10 manual_curation CDS 4574166 4574464 . - 1 Parent=GSCOCT00034773001 | |
| 38791 chr10 manual_curation CDS 4573404 4573652 . - 0 Parent=GSCOCT00034773001 | |
| 38792 chr10 manual_curation gene 4590432 4591769 . + . ID=GSCOCG00034772001;Name=Cc10_g05740 | |
| 38793 chr10 manual_curation mRNA 4590432 4591769 . + . ID=GSCOCT00034772001;Parent=GSCOCG00034772001;Name=Cc10_g05740 | |
| 38794 chr10 manual_curation polypeptide 4590617 4591769 . + . ID=GSCOCP00034772001;Dbxref=InterPro:IPR000073,PFAM:PF00561,SwissProt:O07015,TAIR:AT3G03990.1,TAIR:AT3G24420.1,TAIR:AT4G37470.1,TrEMBL:B9R708,TrEMBL:F6H1A2,TrEMBL:I1MXH9;Derives_from=GSCOCT00034772001;Name=Cc10_g05740;Ontology_term=CC_evidence_code:ISS,CC_EC_number:3.1.1.1,PRODUCT:Putative Sigma factor sigB regulation protein rsbQ,CC_functional_completeness:complete,CC_gene:rsbQ;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034772001~ Putative Sigma factor sigB regulation protein rsbQ~ rsbQ~ complete;original_location=complement(join(4470215..4470585%2C4469433..4469865));owner=coffea | |
| 38795 chr10 manual_curation exon 4591337 4591769 . + . Parent=GSCOCT00034772001 | |
| 38796 chr10 manual_curation exon 4590432 4590987 . + . Parent=GSCOCT00034772001 | |
| 38797 chr10 manual_curation CDS 4591337 4591769 . + 2 Parent=GSCOCT00034772001 | |
| 38798 chr10 manual_curation CDS 4590617 4590987 . + 0 Parent=GSCOCT00034772001 | |
| 38799 chr10 manual_curation gene 4600945 4603571 . - . ID=GSCOCG00034770001;Name=Cc10_g05750 | |
| 38800 chr10 manual_curation mRNA 4600945 4603571 . - . ID=GSCOCT00034770001;Parent=GSCOCG00034770001;Name=Cc10_g05750 | |
| 38801 chr10 manual_curation polypeptide 4601311 4603314 . - . ID=GSCOCP00034770001;Dbxref=GENE3D:G3DSA:1.25.10.10,InterPro:IPR000225,InterPro:IPR011989,InterPro:IPR016024,PFAM:PF00514,PROFILE:PS50176,SMART:SM00185,SUPERFAMILY:SSF48371,SwissProt:O22193,SwissProt:Q5XEZ8,SwissProt:Q8GWV5,TAIR:AT2G23140.1,TAIR:AT3G01400.1,TAIR:AT5G58680.1,TrEMBL:B9R706,TrEMBL:Q8LB86,TrEMBL:Q9SGH8;Derives_from=GSCOCT00034770001;Name=Cc10_g05750;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:Putative U-box domain-containing protein 4,CC_functional_completeness:fragment,CC_gene:PUB4,CC_gene:PUB3,CC_gene:PUB2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034770001~ Putative U-box domain-containing protein 4~ PUB4~ fragment;original_location=join(4457888..4458895%2C4459787..4459891);owner=coffea | |
| 38802 chr10 manual_curation exon 4602307 4603571 . - . Parent=GSCOCT00034770001 | |
| 38803 chr10 manual_curation exon 4600945 4601415 . - . Parent=GSCOCT00034770001 | |
| 38804 chr10 manual_curation CDS 4602307 4603314 . - 0 Parent=GSCOCT00034770001 | |
| 38805 chr10 manual_curation CDS 4601311 4601415 . - 0 Parent=GSCOCT00034770001 | |
| 38806 chr10 manual_curation gene 4609335 4612223 . + . ID=GSCOCG00034769001;Name=Cc10_g05760 | |
| 38807 chr10 manual_curation mRNA 4609335 4612223 . + . ID=GSCOCT00034769001;Parent=GSCOCG00034769001;Name=Cc10_g05760 | |
| 38808 chr10 manual_curation polypeptide 4609479 4611909 . + . ID=GSCOCP00034769001;Dbxref=InterPro:IPR001925,PFAM:PF01459,SwissProt:P42055,SwissProt:Q84P97,SwissProt:Q9FJX3,TAIR:AT3G01280.1,TAIR:AT5G15090.1,TAIR:AT5G67500.2,TrEMBL:A5AQ65,TrEMBL:B9H6N6,TrEMBL:B9SH01;Derives_from=GSCOCT00034769001;Name=Cc10_g05760;Ontology_term=CC_evidence_code:ISS,GO:0005741,GO:0006820,GO:0008308,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Mitochondrial outer membrane protein porin 2,CC_functional_completeness:complete,CC_gene:VDAC2,CC_gene:VDAC5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034769001~ Mitochondrial outer membrane protein porin 2~ VDAC2~ complete;original_location=complement(join(4451672..4451723%2C4451508..4451575%2C4450366..4450476%2C4450193..4450279%2C4449869..4450077%2C4449293..4449599));owner=coffea | |
| 38809 chr10 manual_curation exon 4611603 4612223 . + . Parent=GSCOCT00034769001 | |
| 38810 chr10 manual_curation exon 4611125 4611333 . + . Parent=GSCOCT00034769001 | |
| 38811 chr10 manual_curation exon 4610923 4611009 . + . Parent=GSCOCT00034769001 | |
| 38812 chr10 manual_curation exon 4610726 4610836 . + . Parent=GSCOCT00034769001 | |
| 38813 chr10 manual_curation exon 4609627 4609694 . + . Parent=GSCOCT00034769001 | |
| 38814 chr10 manual_curation exon 4609335 4609530 . + . Parent=GSCOCT00034769001 | |
| 38815 chr10 manual_curation CDS 4611603 4611909 . + 2 Parent=GSCOCT00034769001 | |
| 38816 chr10 manual_curation CDS 4611125 4611333 . + 0 Parent=GSCOCT00034769001 | |
| 38817 chr10 manual_curation CDS 4610923 4611009 . + 0 Parent=GSCOCT00034769001 | |
| 38818 chr10 manual_curation CDS 4610726 4610836 . + 0 Parent=GSCOCT00034769001 | |
| 38819 chr10 manual_curation CDS 4609627 4609694 . + 1 Parent=GSCOCT00034769001 | |
| 38820 chr10 manual_curation CDS 4609479 4609530 . + 0 Parent=GSCOCT00034769001 | |
| 38821 chr10 manual_curation gene 4614034 4615403 . - . ID=GSCOCG00034768001;Name=Cc10_g05770 | |
| 38822 chr10 manual_curation mRNA 4614034 4615403 . - . ID=GSCOCT00034768001;Parent=GSCOCG00034768001;Name=Cc10_g05770 | |
| 38823 chr10 manual_curation polypeptide 4614132 4615208 . - . ID=GSCOCP00034768001;Dbxref=GENE3D:G3DSA:2.120.10.80,InterPro:IPR001810,InterPro:IPR011043,InterPro:IPR015915,InterPro:IPR017451,PFAM:PF00646,PROFILE:PS50181,SMART:SM00256,SUPERFAMILY:SSF50965,SwissProt:Q9FHS6,SwissProt:Q9FZK1,SwissProt:Q9LFV5,TAIR:AT1G27340.1,TAIR:AT5G15710.1,TAIR:AT5G43190.1,TIGRFAMs:TIGR01640,TrEMBL:B9GNP7,TrEMBL:B9IBR5,TrEMBL:I1J461;Derives_from=GSCOCT00034768001;Name=Cc10_g05770;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative F-box/kelch-repeat protein At5g43190,CC_functional_completeness:complete,CC_gene:At5g43190,CC_gene:At5g15710,CC_gene:FBX6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034768001~ Putative F-box/kelch-repeat protein At5g43190~ At5g43190~ complete;original_location=4445994..4447070;owner=coffea | |
| 38824 chr10 manual_curation exon 4614034 4615403 . - . Parent=GSCOCT00034768001 | |
| 38825 chr10 manual_curation CDS 4614132 4615208 . - 0 Parent=GSCOCT00034768001 | |
| 38826 chr10 manual_curation gene 4616284 4622484 . - . ID=GSCOCG00034767001;Name=Cc10_g05780 | |
| 38827 chr10 manual_curation mRNA 4616284 4622484 . - . ID=GSCOCT00034767001;Parent=GSCOCG00034767001;Name=Cc10_g05780 | |
| 38828 chr10 manual_curation polypeptide 4617371 4622296 . - . ID=GSCOCP00034767001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019775,InterPro:IPR019781,InterPro:IPR019782,InterPro:IPR020472,PFAM:PF00400,PRINTS:PR00320,PROFILE:PS50082,PROFILE:PS50294,PROSITE:PS00678,SMART:SM00320,SUPERFAMILY:SSF50978,SwissProt:Q13216,SwissProt:Q5BIM8,SwissProt:Q8CFD5,TAIR:AT1G19750.1,TAIR:AT1G27840.3,TAIR:AT2G16780.1,TrEMBL:B9IBR4,TrEMBL:B9R702,TrEMBL:E0CP23;Derives_from=GSCOCT00034767001;Name=Cc10_g05780;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative DNA excision repair protein ERCC-8,CC_functional_completeness:complete,CC_gene:ERCC8,CC_gene:Ercc8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034767001~ Putative DNA excision repair protein ERCC-8~ ERCC8~ complete;original_location=join(4438906..4439055%2C4439867..4440124%2C4440257..4440416%2C4441390..4441568%2C4442000..4442249%2C4442873..4443027%2C4443118..4443207%2C4443583..4443654%2C4443775..4443831);owner=coffea | |
| 38829 chr10 manual_curation exon 4622147 4622484 . - . Parent=GSCOCT00034767001 | |
| 38830 chr10 manual_curation exon 4621078 4621335 . - . Parent=GSCOCT00034767001 | |
| 38831 chr10 manual_curation exon 4620786 4620945 . - . Parent=GSCOCT00034767001 | |
| 38832 chr10 manual_curation exon 4619634 4619812 . - . Parent=GSCOCT00034767001 | |
| 38833 chr10 manual_curation exon 4618953 4619202 . - . Parent=GSCOCT00034767001 | |
| 38834 chr10 manual_curation exon 4618175 4618329 . - . Parent=GSCOCT00034767001 | |
| 38835 chr10 manual_curation exon 4617995 4618084 . - . Parent=GSCOCT00034767001 | |
| 38836 chr10 manual_curation exon 4617548 4617619 . - . Parent=GSCOCT00034767001 | |
| 38837 chr10 manual_curation exon 4616284 4617427 . - . Parent=GSCOCT00034767001 | |
| 38838 chr10 manual_curation CDS 4622147 4622296 . - 0 Parent=GSCOCT00034767001 | |
| 38839 chr10 manual_curation CDS 4621078 4621335 . - 0 Parent=GSCOCT00034767001 | |
| 38840 chr10 manual_curation CDS 4620786 4620945 . - 0 Parent=GSCOCT00034767001 | |
| 38841 chr10 manual_curation CDS 4619634 4619812 . - 1 Parent=GSCOCT00034767001 | |
| 38842 chr10 manual_curation CDS 4618953 4619202 . - 0 Parent=GSCOCT00034767001 | |
| 38843 chr10 manual_curation CDS 4618175 4618329 . - 1 Parent=GSCOCT00034767001 | |
| 38844 chr10 manual_curation CDS 4617995 4618084 . - 0 Parent=GSCOCT00034767001 | |
| 38845 chr10 manual_curation CDS 4617548 4617619 . - 0 Parent=GSCOCT00034767001 | |
| 38846 chr10 manual_curation CDS 4617371 4617427 . - 0 Parent=GSCOCT00034767001 | |
| 38847 chr10 manual_curation gene 4629265 4632557 . + . ID=GSCOCG00034765001;Name=Cc10_g05790 | |
| 38848 chr10 manual_curation mRNA 4629265 4632557 . + . ID=GSCOCT00034765001;Parent=GSCOCG00034765001;Name=Cc10_g05790 | |
| 38849 chr10 manual_curation polypeptide 4629265 4632187 . + . ID=GSCOCP00034765001;Dbxref=GENE3D:G3DSA:1.25.40.10,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR019734,PROFILE:PS50005,PROFILE:PS50293,SMART:SM00028,SwissProt:Q86TV6,SwissProt:Q8BGB2,SwissProt:Q9ULT0,TAIR:AT1G27460.1,TAIR:AT2G43040.1,TAIR:AT4G28600.1,TrEMBL:A5BYF1,TrEMBL:B9GNP5,TrEMBL:F6H1A1;Derives_from=GSCOCT00034765001;Name=Cc10_g05790;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:no pollen germination related 1,CC_functional_completeness:complete,CC_gene:TTC7A,CC_gene:Ttc7a,CC_gene:TTC7B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034765001~ no pollen germination related 1~ TTC7A~ complete;original_location=complement(join(4431737..4431937%2C4431395..4431653%2C4429884..4431101%2C4429419..4429562%2C4429015..4429325));owner=coffea | |
| 38850 chr10 manual_curation exon 4631877 4632557 . + . Parent=GSCOCT00034765001 | |
| 38851 chr10 manual_curation exon 4631640 4631783 . + . Parent=GSCOCT00034765001 | |
| 38852 chr10 manual_curation exon 4630101 4631318 . + . Parent=GSCOCT00034765001 | |
| 38853 chr10 manual_curation exon 4629549 4629807 . + . Parent=GSCOCT00034765001 | |
| 38854 chr10 manual_curation exon 4629265 4629465 . + . Parent=GSCOCT00034765001 | |
| 38855 chr10 manual_curation CDS 4631877 4632187 . + 1 Parent=GSCOCT00034765001 | |
| 38856 chr10 manual_curation CDS 4631640 4631783 . + 1 Parent=GSCOCT00034765001 | |
| 38857 chr10 manual_curation CDS 4630101 4631318 . + 1 Parent=GSCOCT00034765001 | |
| 38858 chr10 manual_curation CDS 4629549 4629807 . + 0 Parent=GSCOCT00034765001 | |
| 38859 chr10 manual_curation CDS 4629265 4629465 . + 0 Parent=GSCOCT00034765001 | |
| 38860 chr10 manual_curation gene 4636743 4640666 . + . ID=GSCOCG00034763001;Name=Cc10_g05800 | |
| 38861 chr10 manual_curation mRNA 4636743 4640666 . + . ID=GSCOCT00034763001;Parent=GSCOCG00034763001;Name=Cc10_g05800 | |
| 38862 chr10 manual_curation polypeptide 4637261 4640382 . + . ID=GSCOCP00034763001;Dbxref=TAIR:AT1G59600.1,TrEMBL:A5BYE9,TrEMBL:B9GNP3,TrEMBL:I1M8U1;Derives_from=GSCOCT00034763001;Name=Cc10_g05800;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:ZCW7,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034763001~ ZCW7~ unknown_gene~ fragment;original_location=complement(join(4423818..4423941%2C4422925..4423066%2C4421745..4421904%2C4421033..4421236%2C4420820..4420825));owner=coffea | |
| 38863 chr10 manual_curation exon 4640377 4640666 . + . Parent=GSCOCT00034763001 | |
| 38864 chr10 manual_curation exon 4639966 4640169 . + . Parent=GSCOCT00034763001 | |
| 38865 chr10 manual_curation exon 4639298 4639457 . + . Parent=GSCOCT00034763001 | |
| 38866 chr10 manual_curation exon 4638136 4638277 . + . Parent=GSCOCT00034763001 | |
| 38867 chr10 manual_curation exon 4636743 4637384 . + . Parent=GSCOCT00034763001 | |
| 38868 chr10 manual_curation CDS 4640377 4640382 . + 0 Parent=GSCOCT00034763001 | |
| 38869 chr10 manual_curation CDS 4639966 4640169 . + 0 Parent=GSCOCT00034763001 | |
| 38870 chr10 manual_curation CDS 4639298 4639457 . + 2 Parent=GSCOCT00034763001 | |
| 38871 chr10 manual_curation CDS 4638136 4638277 . + 1 Parent=GSCOCT00034763001 | |
| 38872 chr10 manual_curation CDS 4637261 4637384 . + 0 Parent=GSCOCT00034763001 | |
| 38873 chr10 manual_curation gene 4653726 4656599 . + . ID=GSCOCG00034759001;Name=Cc10_g05810 | |
| 38874 chr10 manual_curation mRNA 4653726 4656599 . + . ID=GSCOCT00034759001;Parent=GSCOCG00034759001;Name=Cc10_g05810 | |
| 38875 chr10 manual_curation polypeptide 4654880 4656259 . + . ID=GSCOCP00034759001;Derives_from=GSCOCT00034759001;Name=Cc10_g05810;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034759001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(4405837..4406322%2C4404943..4404954));owner=coffea | |
| 38876 chr10 manual_curation exon 4656248 4656599 . + . Parent=GSCOCT00034759001 | |
| 38877 chr10 manual_curation exon 4653726 4655365 . + . Parent=GSCOCT00034759001 | |
| 38878 chr10 manual_curation CDS 4656248 4656259 . + 0 Parent=GSCOCT00034759001 | |
| 38879 chr10 manual_curation CDS 4654880 4655365 . + 0 Parent=GSCOCT00034759001 | |
| 38880 chr10 manual_curation gene 4658220 4659768 . + . ID=GSCOCG00034758001;Name=Cc10_g05820 | |
| 38881 chr10 manual_curation mRNA 4658220 4659768 . + . ID=GSCOCT00034758001;Parent=GSCOCG00034758001;Name=Cc10_g05820 | |
| 38882 chr10 manual_curation polypeptide 4658220 4659768 . + . ID=GSCOCP00034758001;Dbxref=GENE3D:G3DSA:3.20.20.300,InterPro:IPR001764,InterPro:IPR017853,PFAM:PF00933,PRINTS:PR00133,SUPERFAMILY:SSF51445,SwissProt:A5JTQ2,SwissProt:A5JTQ3,SwissProt:Q9LJN4,TAIR:AT3G19620.1,TAIR:AT5G49360.1,TAIR:AT5G64570.1,TrEMBL:B9S149,TrEMBL:F6HE27,TrEMBL:F6HE28;Derives_from=GSCOCT00034758001;Name=Cc10_g05820;Ontology_term=CC_evidence_code:ISS,GO:0005975,CC_EC_number:3.2.1.21,PRODUCT:Beta-glucosidase%2C putative,CC_functional_completeness:fragment,CC_gene:BXL5,CC_gene:Xyl2,CC_gene:Xyl1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034758001~ Beta-glucosidase%2C putative~ BXL5~ fragment;original_location=complement(join(4402515..4402982%2C4402047..4402352%2C4401767..4401936%2C4401434..4401647));owner=coffea | |
| 38883 chr10 manual_curation exon 4659555 4659768 . + . Parent=GSCOCT00034758001 | |
| 38884 chr10 manual_curation exon 4659266 4659435 . + . Parent=GSCOCT00034758001 | |
| 38885 chr10 manual_curation exon 4658850 4659155 . + . Parent=GSCOCT00034758001 | |
| 38886 chr10 manual_curation exon 4658220 4658687 . + . Parent=GSCOCT00034758001 | |
| 38887 chr10 manual_curation CDS 4659555 4659768 . + 2 Parent=GSCOCT00034758001 | |
| 38888 chr10 manual_curation CDS 4659266 4659435 . + 0 Parent=GSCOCT00034758001 | |
| 38889 chr10 manual_curation CDS 4658850 4659155 . + 0 Parent=GSCOCT00034758001 | |
| 38890 chr10 manual_curation CDS 4658220 4658687 . + 0 Parent=GSCOCT00034758001 | |
| 38891 chr10 manual_curation gene 4663360 4667204 . + . ID=GSCOCG00034757001;Name=Cc10_g05830 | |
| 38892 chr10 manual_curation mRNA 4663360 4667204 . + . ID=GSCOCT00034757001;Parent=GSCOCG00034757001;Name=Cc10_g05830 | |
| 38893 chr10 manual_curation polypeptide 4663360 4667204 . + . ID=GSCOCP00034757001;Dbxref=GENE3D:G3DSA:3.20.20.300,InterPro:IPR001764,InterPro:IPR002772,InterPro:IPR017853,PFAM:PF00933,PFAM:PF01915,PRINTS:PR00133,SUPERFAMILY:SSF51445,SUPERFAMILY:SSF52279,SwissProt:A5JTQ2,SwissProt:A5JTQ3,SwissProt:Q9LJN4,TAIR:AT1G02640.1,TAIR:AT3G19620.1,TAIR:AT5G64570.1,TrEMBL:B9S149,TrEMBL:F6HE26,TrEMBL:F6HE28;Derives_from=GSCOCT00034757001;Name=Cc10_g05830;Ontology_term=CC_evidence_code:ISS,GO:0005975,CC_EC_number:3.2.1.21,PRODUCT:Probable beta-D-xylosidase 5,CC_functional_completeness:complete,CC_gene:BXL5,CC_gene:Xyl2,CC_gene:Xyl1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034757001~ Probable beta-D-xylosidase 5~ BXL5~ complete;original_location=complement(join(4397381..4397842%2C4396981..4397286%2C4396713..4396882%2C4396498..4396598%2C4395275..4395616%2C4394730..4395146%2C4394398..4394617%2C4393998..4394301));owner=coffea | |
| 38894 chr10 manual_curation exon 4666901 4667204 . + . Parent=GSCOCT00034757001 | |
| 38895 chr10 manual_curation exon 4666585 4666804 . + . Parent=GSCOCT00034757001 | |
| 38896 chr10 manual_curation exon 4666056 4666472 . + . Parent=GSCOCT00034757001 | |
| 38897 chr10 manual_curation exon 4665586 4665927 . + . Parent=GSCOCT00034757001 | |
| 38898 chr10 manual_curation exon 4664604 4664704 . + . Parent=GSCOCT00034757001 | |
| 38899 chr10 manual_curation exon 4664320 4664489 . + . Parent=GSCOCT00034757001 | |
| 38900 chr10 manual_curation exon 4663916 4664221 . + . Parent=GSCOCT00034757001 | |
| 38901 chr10 manual_curation exon 4663360 4663821 . + . Parent=GSCOCT00034757001 | |
| 38902 chr10 manual_curation CDS 4666901 4667204 . + 2 Parent=GSCOCT00034757001 | |
| 38903 chr10 manual_curation CDS 4666585 4666804 . + 1 Parent=GSCOCT00034757001 | |
| 38904 chr10 manual_curation CDS 4666056 4666472 . + 1 Parent=GSCOCT00034757001 | |
| 38905 chr10 manual_curation CDS 4665586 4665927 . + 1 Parent=GSCOCT00034757001 | |
| 38906 chr10 manual_curation CDS 4664604 4664704 . + 2 Parent=GSCOCT00034757001 | |
| 38907 chr10 manual_curation CDS 4664320 4664489 . + 0 Parent=GSCOCT00034757001 | |
| 38908 chr10 manual_curation CDS 4663916 4664221 . + 0 Parent=GSCOCT00034757001 | |
| 38909 chr10 manual_curation CDS 4663360 4663821 . + 0 Parent=GSCOCT00034757001 | |
| 38910 chr10 manual_curation gene 4677627 4679715 . + . ID=GSCOCG00034756001;Name=Cc10_g05840 | |
| 38911 chr10 manual_curation mRNA 4677627 4679715 . + . ID=GSCOCT00034756001;Parent=GSCOCG00034756001;Name=Cc10_g05840 | |
| 38912 chr10 manual_curation polypeptide 4677824 4679266 . + . ID=GSCOCP00034756001;Dbxref=InterPro:IPR007650,PFAM:PF04570,TAIR:AT1G22160.1,TAIR:AT1G78020.1,TAIR:AT4G39795.1,TrEMBL:B9RJG4,TrEMBL:F6H0V4,TrEMBL:G0Z810;Derives_from=GSCOCT00034756001;Name=Cc10_g05840;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of unknown function (DUF581),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034756001~ Putative Protein of unknown function (DUF581)~ unknown_gene~ complete;original_location=complement(join(4383047..4383378%2C4381936..4382095));owner=coffea | |
| 38913 chr10 manual_curation exon 4679107 4679715 . + . Parent=GSCOCT00034756001 | |
| 38914 chr10 manual_curation exon 4677627 4678155 . + . Parent=GSCOCT00034756001 | |
| 38915 chr10 manual_curation CDS 4679107 4679266 . + 2 Parent=GSCOCT00034756001 | |
| 38916 chr10 manual_curation CDS 4677824 4678155 . + 0 Parent=GSCOCT00034756001 | |
| 38917 chr10 manual_curation gene 4699039 4712057 . + . ID=GSCOCG00034753001;Name=Cc10_g05850 | |
| 38918 chr10 manual_curation mRNA 4699039 4712057 . + . ID=GSCOCT00034753001;Parent=GSCOCG00034753001;Name=Cc10_g05850 | |
| 38919 chr10 manual_curation polypeptide 4699039 4711398 . + . ID=GSCOCP00034753001;Dbxref=GENE3D:G3DSA:3.30.470.20,GENE3D:G3DSA:3.40.50.20,InterPro:IPR000022,InterPro:IPR000089,InterPro:IPR001882,InterPro:IPR005479,InterPro:IPR005481,InterPro:IPR005482,InterPro:IPR011053,InterPro:IPR011054,InterPro:IPR011761,InterPro:IPR011762,InterPro:IPR011763,InterPro:IPR011764,InterPro:IPR013537,InterPro:IPR013816,InterPro:IPR013817,InterPro:IPR016185,PFAM:PF00289,PFAM:PF00364,PFAM:PF01039,PFAM:PF02785,PFAM:PF02786,PFAM:PF08326,PROFILE:PS50968,PROFILE:PS50975,PROFILE:PS50979,PROFILE:PS50980,PROFILE:PS50989,PROSITE:PS00188,PROSITE:PS00867,SMART:SM00878,SUPERFAMILY:SSF51230,SUPERFAMILY:SSF51246,SUPERFAMILY:SSF52440,SwissProt:F4I1L3,SwissProt:Q38970,SwissProt:Q8S6N5,TAIR:AT1G03090.2,TAIR:AT1G36160.1,TAIR:AT1G36180.1,TrEMBL:B9GUK0,TrEMBL:B9RJG2,TrEMBL:F6H0V3;Derives_from=GSCOCT00034753001;Name=Cc10_g05850;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0003989,GO:0005524,GO:0006633,GO:0008152,GO:0009374,GO:0016874,CC_EC_number:6.4.1.2,CC_EC_number:6.4.1.2,PRODUCT:Acetyl-CoA carboxylase 1,CC_functional_completeness:complete,CC_gene:ACC1,CC_gene:ACC2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034753001~ Acetyl-CoA carboxylase 1~ ACC1~ complete;original_location=complement(join(4361789..4362163%2C4361191..4361397%2C4360941..4361102%2C4360613..4360705%2C4360426..4360521%2C4359892..4360065%2C4359620..4359713%2C4359347..4359534%2C4359200..4359250%2C4359079..4359118%2C4358224..4358348%2C4358024..4358140%2C4357814..4357888%2C4357677..4357733%2C4357334..4357450%2C4357096..4357182%2C4356819..4357010%2C4356559..4356747%2C4356278..4356388%2C4356094..4356180%2C4355831..4356007%2C4355310..4355387%2C4355097..4355219%2C4354755..4355024%2C4354334..4354674%2C4353564..4353801%2C4353084..4353436%2C4352780..4352993%2C4352180..4352356%2C4349963..4352107%2C4349804..4349875));owner=coffea | |
| 38920 chr10 manual_curation exon 4711327 4712057 . + . Parent=GSCOCT00034753001 | |
| 38921 chr10 manual_curation exon 4709095 4711239 . + . Parent=GSCOCT00034753001 | |
| 38922 chr10 manual_curation exon 4708846 4709022 . + . Parent=GSCOCT00034753001 | |
| 38923 chr10 manual_curation exon 4708209 4708422 . + . Parent=GSCOCT00034753001 | |
| 38924 chr10 manual_curation exon 4707766 4708118 . + . Parent=GSCOCT00034753001 | |
| 38925 chr10 manual_curation exon 4707401 4707638 . + . Parent=GSCOCT00034753001 | |
| 38926 chr10 manual_curation exon 4706528 4706868 . + . Parent=GSCOCT00034753001 | |
| 38927 chr10 manual_curation exon 4706178 4706447 . + . Parent=GSCOCT00034753001 | |
| 38928 chr10 manual_curation exon 4705983 4706105 . + . Parent=GSCOCT00034753001 | |
| 38929 chr10 manual_curation exon 4705815 4705892 . + . Parent=GSCOCT00034753001 | |
| 38930 chr10 manual_curation exon 4705195 4705371 . + . Parent=GSCOCT00034753001 | |
| 38931 chr10 manual_curation exon 4705022 4705108 . + . Parent=GSCOCT00034753001 | |
| 38932 chr10 manual_curation exon 4704814 4704924 . + . Parent=GSCOCT00034753001 | |
| 38933 chr10 manual_curation exon 4704455 4704643 . + . Parent=GSCOCT00034753001 | |
| 38934 chr10 manual_curation exon 4704192 4704383 . + . Parent=GSCOCT00034753001 | |
| 38935 chr10 manual_curation exon 4704020 4704106 . + . Parent=GSCOCT00034753001 | |
| 38936 chr10 manual_curation exon 4703752 4703868 . + . Parent=GSCOCT00034753001 | |
| 38937 chr10 manual_curation exon 4703469 4703525 . + . Parent=GSCOCT00034753001 | |
| 38938 chr10 manual_curation exon 4703314 4703388 . + . Parent=GSCOCT00034753001 | |
| 38939 chr10 manual_curation exon 4703062 4703178 . + . Parent=GSCOCT00034753001 | |
| 38940 chr10 manual_curation exon 4702854 4702978 . + . Parent=GSCOCT00034753001 | |
| 38941 chr10 manual_curation exon 4702084 4702123 . + . Parent=GSCOCT00034753001 | |
| 38942 chr10 manual_curation exon 4701952 4702002 . + . Parent=GSCOCT00034753001 | |
| 38943 chr10 manual_curation exon 4701668 4701855 . + . Parent=GSCOCT00034753001 | |
| 38944 chr10 manual_curation exon 4701489 4701582 . + . Parent=GSCOCT00034753001 | |
| 38945 chr10 manual_curation exon 4701137 4701310 . + . Parent=GSCOCT00034753001 | |
| 38946 chr10 manual_curation exon 4700681 4700776 . + . Parent=GSCOCT00034753001 | |
| 38947 chr10 manual_curation exon 4700497 4700589 . + . Parent=GSCOCT00034753001 | |
| 38948 chr10 manual_curation exon 4700100 4700261 . + . Parent=GSCOCT00034753001 | |
| 38949 chr10 manual_curation exon 4699805 4700011 . + . Parent=GSCOCT00034753001 | |
| 38950 chr10 manual_curation exon 4699039 4699413 . + . Parent=GSCOCT00034753001 | |
| 38951 chr10 manual_curation CDS 4711327 4711398 . + 0 Parent=GSCOCT00034753001 | |
| 38952 chr10 manual_curation CDS 4709095 4711239 . + 0 Parent=GSCOCT00034753001 | |
| 38953 chr10 manual_curation CDS 4708846 4709022 . + 0 Parent=GSCOCT00034753001 | |
| 38954 chr10 manual_curation CDS 4708209 4708422 . + 2 Parent=GSCOCT00034753001 | |
| 38955 chr10 manual_curation CDS 4707766 4708118 . + 0 Parent=GSCOCT00034753001 | |
| 38956 chr10 manual_curation CDS 4707401 4707638 . + 2 Parent=GSCOCT00034753001 | |
| 38957 chr10 manual_curation CDS 4706528 4706868 . + 0 Parent=GSCOCT00034753001 | |
| 38958 chr10 manual_curation CDS 4706178 4706447 . + 0 Parent=GSCOCT00034753001 | |
| 38959 chr10 manual_curation CDS 4705983 4706105 . + 0 Parent=GSCOCT00034753001 | |
| 38960 chr10 manual_curation CDS 4705815 4705892 . + 0 Parent=GSCOCT00034753001 | |
| 38961 chr10 manual_curation CDS 4705195 4705371 . + 0 Parent=GSCOCT00034753001 | |
| 38962 chr10 manual_curation CDS 4705022 4705108 . + 0 Parent=GSCOCT00034753001 | |
| 38963 chr10 manual_curation CDS 4704814 4704924 . + 0 Parent=GSCOCT00034753001 | |
| 38964 chr10 manual_curation CDS 4704455 4704643 . + 0 Parent=GSCOCT00034753001 | |
| 38965 chr10 manual_curation CDS 4704192 4704383 . + 0 Parent=GSCOCT00034753001 | |
| 38966 chr10 manual_curation CDS 4704020 4704106 . + 0 Parent=GSCOCT00034753001 | |
| 38967 chr10 manual_curation CDS 4703752 4703868 . + 0 Parent=GSCOCT00034753001 | |
| 38968 chr10 manual_curation CDS 4703469 4703525 . + 0 Parent=GSCOCT00034753001 | |
| 38969 chr10 manual_curation CDS 4703314 4703388 . + 0 Parent=GSCOCT00034753001 | |
| 38970 chr10 manual_curation CDS 4703062 4703178 . + 0 Parent=GSCOCT00034753001 | |
| 38971 chr10 manual_curation CDS 4702854 4702978 . + 1 Parent=GSCOCT00034753001 | |
| 38972 chr10 manual_curation CDS 4702084 4702123 . + 0 Parent=GSCOCT00034753001 | |
| 38973 chr10 manual_curation CDS 4701952 4702002 . + 0 Parent=GSCOCT00034753001 | |
| 38974 chr10 manual_curation CDS 4701668 4701855 . + 1 Parent=GSCOCT00034753001 | |
| 38975 chr10 manual_curation CDS 4701489 4701582 . + 0 Parent=GSCOCT00034753001 | |
| 38976 chr10 manual_curation CDS 4701137 4701310 . + 0 Parent=GSCOCT00034753001 | |
| 38977 chr10 manual_curation CDS 4700681 4700776 . + 0 Parent=GSCOCT00034753001 | |
| 38978 chr10 manual_curation CDS 4700497 4700589 . + 0 Parent=GSCOCT00034753001 | |
| 38979 chr10 manual_curation CDS 4700100 4700261 . + 0 Parent=GSCOCT00034753001 | |
| 38980 chr10 manual_curation CDS 4699805 4700011 . + 0 Parent=GSCOCT00034753001 | |
| 38981 chr10 manual_curation CDS 4699039 4699413 . + 0 Parent=GSCOCT00034753001 | |
| 38982 chr10 manual_curation gene 4717112 4724096 . - . ID=GSCOCG00034750001;Name=Cc10_g05860 | |
| 38983 chr10 manual_curation mRNA 4717112 4724096 . - . ID=GSCOCT00034750001;Parent=GSCOCG00034750001;Name=Cc10_g05860 | |
| 38984 chr10 manual_curation polypeptide 4717303 4724096 . - . ID=GSCOCP00034750001;Dbxref=GENE3D:G3DSA:3.30.1360.120,HAMAP:MF_00379,InterPro:IPR002917,InterPro:IPR004520,InterPro:IPR005225,InterPro:IPR018948,PFAM:PF01926,PFAM:PF10396,SwissProt:Q3MBM5,SwissProt:Q8KPU2,SwissProt:Q8YN91,TAIR:AT1G78010.1,TAIR:AT3G12080.1,TIGRFAMs:TIGR00231,TIGRFAMs:TIGR00450,TrEMBL:B9RJF9,TrEMBL:E0CRH3,TrEMBL:I1JVH7;Derives_from=GSCOCT00034750001;Name=Cc10_g05860;Ontology_term=CC_evidence_code:ISS,GO:0003924,GO:0005525,GO:0005622,GO:0006400,CC_EC_number:missing_EC_number,PRODUCT:Putative tRNA modification GTPase MnmE,CC_functional_completeness:complete,CC_gene:mnmE;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034750001~ Putative tRNA modification GTPase MnmE~ mnmE~ complete;original_location=join(4337106..4337283%2C4337374..4337675%2C4338145..4338283%2C4339105..4339226%2C4339421..4339624%2C4340126..4340185%2C4341121..4341259%2C4341941..4342059%2C4342979..4343200%2C4343705..4343899);owner=coffea | |
| 38985 chr10 manual_curation exon 4723919 4724096 . - . Parent=GSCOCT00034750001 | |
| 38986 chr10 manual_curation exon 4723527 4723828 . - . Parent=GSCOCT00034750001 | |
| 38987 chr10 manual_curation exon 4722919 4723057 . - . Parent=GSCOCT00034750001 | |
| 38988 chr10 manual_curation exon 4721976 4722097 . - . Parent=GSCOCT00034750001 | |
| 38989 chr10 manual_curation exon 4721578 4721781 . - . Parent=GSCOCT00034750001 | |
| 38990 chr10 manual_curation exon 4721017 4721076 . - . Parent=GSCOCT00034750001 | |
| 38991 chr10 manual_curation exon 4719943 4720081 . - . Parent=GSCOCT00034750001 | |
| 38992 chr10 manual_curation exon 4719143 4719261 . - . Parent=GSCOCT00034750001 | |
| 38993 chr10 manual_curation exon 4718002 4718223 . - . Parent=GSCOCT00034750001 | |
| 38994 chr10 manual_curation exon 4717112 4717497 . - . Parent=GSCOCT00034750001 | |
| 38995 chr10 manual_curation CDS 4723919 4724096 . - 0 Parent=GSCOCT00034750001 | |
| 38996 chr10 manual_curation CDS 4723527 4723828 . - 1 Parent=GSCOCT00034750001 | |
| 38997 chr10 manual_curation CDS 4722919 4723057 . - 0 Parent=GSCOCT00034750001 | |
| 38998 chr10 manual_curation CDS 4721976 4722097 . - 1 Parent=GSCOCT00034750001 | |
| 38999 chr10 manual_curation CDS 4721578 4721781 . - 0 Parent=GSCOCT00034750001 | |
| 39000 chr10 manual_curation CDS 4721017 4721076 . - 0 Parent=GSCOCT00034750001 | |
| 39001 chr10 manual_curation CDS 4719943 4720081 . - 0 Parent=GSCOCT00034750001 | |
| 39002 chr10 manual_curation CDS 4719143 4719261 . - 1 Parent=GSCOCT00034750001 | |
| 39003 chr10 manual_curation CDS 4718002 4718223 . - 0 Parent=GSCOCT00034750001 | |
| 39004 chr10 manual_curation CDS 4717303 4717497 . - 0 Parent=GSCOCT00034750001 | |
| 39005 chr10 manual_curation gene 4747245 4751734 . + . ID=GSCOCG00034748001;Name=Cc10_g05870 | |
| 39006 chr10 manual_curation mRNA 4747245 4751734 . + . ID=GSCOCT00034748001;Parent=GSCOCG00034748001;Name=Cc10_g05870 | |
| 39007 chr10 manual_curation polypeptide 4747332 4751348 . + . ID=GSCOCP00034748001;Dbxref=InterPro:IPR001902,InterPro:IPR002645,InterPro:IPR011547,InterPro:IPR018045,PFAM:PF00916,PFAM:PF01740,PROFILE:PS50801,PROSITE:PS01130,SUPERFAMILY:SSF52091,SwissProt:O04722,SwissProt:P53393,SwissProt:P92946,TAIR:AT1G77990.1,TAIR:AT4G08620.1,TAIR:AT5G10180.1,TIGRFAMs:TIGR00815,TrEMBL:B9RJF7,TrEMBL:E0CRG7,TrEMBL:F6H4M1;Derives_from=GSCOCT00034748001;Name=Cc10_g05870;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006810,GO:0008271,GO:0008272,GO:0016020,GO:0016021,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Low affinity sulfate transporter 3,CC_functional_completeness:complete,CC_gene:ST3,CC_gene:SULTR2%3B1,CC_gene:SULTR2%3B2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034748001~ Low affinity sulfate transporter 3~ ST3~ complete;original_location=complement(join(4313568..4313870%2C4313402..4313450%2C4313084..4313291%2C4312828..4312978%2C4312579..4312644%2C4312229..4312459%2C4311984..4312110%2C4311314..4311600%2C4310478..4310671%2C4310268..4310356%2C4310103..4310179%2C4309854..4310012));owner=coffea | |
| 39008 chr10 manual_curation exon 4751190 4751734 . + . Parent=GSCOCT00034748001 | |
| 39009 chr10 manual_curation exon 4751023 4751099 . + . Parent=GSCOCT00034748001 | |
| 39010 chr10 manual_curation exon 4750846 4750934 . + . Parent=GSCOCT00034748001 | |
| 39011 chr10 manual_curation exon 4750531 4750724 . + . Parent=GSCOCT00034748001 | |
| 39012 chr10 manual_curation exon 4749602 4749888 . + . Parent=GSCOCT00034748001 | |
| 39013 chr10 manual_curation exon 4749092 4749218 . + . Parent=GSCOCT00034748001 | |
| 39014 chr10 manual_curation exon 4748743 4748973 . + . Parent=GSCOCT00034748001 | |
| 39015 chr10 manual_curation exon 4748558 4748623 . + . Parent=GSCOCT00034748001 | |
| 39016 chr10 manual_curation exon 4748224 4748374 . + . Parent=GSCOCT00034748001 | |
| 39017 chr10 manual_curation exon 4747911 4748118 . + . Parent=GSCOCT00034748001 | |
| 39018 chr10 manual_curation exon 4747752 4747800 . + . Parent=GSCOCT00034748001 | |
| 39019 chr10 manual_curation exon 4747245 4747634 . + . Parent=GSCOCT00034748001 | |
| 39020 chr10 manual_curation CDS 4751190 4751348 . + 0 Parent=GSCOCT00034748001 | |
| 39021 chr10 manual_curation CDS 4751023 4751099 . + 1 Parent=GSCOCT00034748001 | |
| 39022 chr10 manual_curation CDS 4750846 4750934 . + 2 Parent=GSCOCT00034748001 | |
| 39023 chr10 manual_curation CDS 4750531 4750724 . + 0 Parent=GSCOCT00034748001 | |
| 39024 chr10 manual_curation CDS 4749602 4749888 . + 1 Parent=GSCOCT00034748001 | |
| 39025 chr10 manual_curation CDS 4749092 4749218 . + 0 Parent=GSCOCT00034748001 | |
| 39026 chr10 manual_curation CDS 4748743 4748973 . + 0 Parent=GSCOCT00034748001 | |
| 39027 chr10 manual_curation CDS 4748558 4748623 . + 0 Parent=GSCOCT00034748001 | |
| 39028 chr10 manual_curation CDS 4748224 4748374 . + 2 Parent=GSCOCT00034748001 | |
| 39029 chr10 manual_curation CDS 4747911 4748118 . + 1 Parent=GSCOCT00034748001 | |
| 39030 chr10 manual_curation CDS 4747752 4747800 . + 0 Parent=GSCOCT00034748001 | |
| 39031 chr10 manual_curation CDS 4747332 4747634 . + 0 Parent=GSCOCT00034748001 | |
| 39032 chr10 manual_curation gene 4753952 4756743 . + . ID=GSCOCG00034747001;Name=Cc10_g05880 | |
| 39033 chr10 manual_curation mRNA 4753952 4756743 . + . ID=GSCOCT00034747001;Parent=GSCOCG00034747001;Name=Cc10_g05880 | |
| 39034 chr10 manual_curation polypeptide 4754038 4755859 . + . ID=GSCOCP00034747001;Dbxref=TAIR:AT1G22140.1,TrEMBL:B9RJF6,TrEMBL:F6H0V1,TrEMBL:I1LW10;Derives_from=GSCOCT00034747001;Name=Cc10_g05880;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B Has 40 Blast hits to 40 proteins in 14 species,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034747001~ unknown protein%3B Has 40 Blast hits to 40 proteins in 14 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 9%3B Fungi - 0%3B Plants - 28%3B Viruses - 0%3B Other Eukaryotes - 3 (source: NCBI BLink).~ unknown_gene~ modules;original_location=complement(join(4307057..4307164%2C4305343..4305477));owner=coffea | |
| 39035 chr10 manual_curation exon 4755725 4756743 . + . Parent=GSCOCT00034747001 | |
| 39036 chr10 manual_curation exon 4753952 4754145 . + . Parent=GSCOCT00034747001 | |
| 39037 chr10 manual_curation CDS 4755725 4755859 . + 0 Parent=GSCOCT00034747001 | |
| 39038 chr10 manual_curation CDS 4754038 4754145 . + 0 Parent=GSCOCT00034747001 | |
| 39039 chr10 manual_curation gene 4768026 4768408 . - . ID=GSCOCG00034746001;Name=Cc10_g05890 | |
| 39040 chr10 manual_curation mRNA 4768026 4768408 . - . ID=GSCOCT00034746001;Parent=GSCOCG00034746001;Name=Cc10_g05890 | |
| 39041 chr10 manual_curation polypeptide 4768107 4768408 . - . ID=GSCOCP00034746001;Derives_from=GSCOCT00034746001;Name=Cc10_g05890;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034746001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(4292794..4292872%2C4292992..4293095);owner=coffea | |
| 39042 chr10 manual_curation exon 4768330 4768408 . - . Parent=GSCOCT00034746001 | |
| 39043 chr10 manual_curation exon 4768026 4768210 . - . Parent=GSCOCT00034746001 | |
| 39044 chr10 manual_curation CDS 4768330 4768408 . - 0 Parent=GSCOCT00034746001 | |
| 39045 chr10 manual_curation CDS 4768107 4768210 . - 1 Parent=GSCOCT00034746001 | |
| 39046 chr10 manual_curation gene 4768472 4769300 . - . ID=GSCOCG00034745001;Name=Cc10_g05900 | |
| 39047 chr10 manual_curation mRNA 4768472 4769300 . - . ID=GSCOCT00034745001;Parent=GSCOCG00034745001;Name=Cc10_g05900 | |
| 39048 chr10 manual_curation polypeptide 4768472 4769300 . - . ID=GSCOCP00034745001;Derives_from=GSCOCT00034745001;Name=Cc10_g05900;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034745001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(4291902..4291927%2C4291995..4292073%2C4292205..4292332%2C4292619..4292730);owner=coffea | |
| 39049 chr10 manual_curation exon 4769275 4769300 . - . Parent=GSCOCT00034745001 | |
| 39050 chr10 manual_curation exon 4769129 4769207 . - . Parent=GSCOCT00034745001 | |
| 39051 chr10 manual_curation exon 4768870 4768997 . - . Parent=GSCOCT00034745001 | |
| 39052 chr10 manual_curation exon 4768472 4768583 . - . Parent=GSCOCT00034745001 | |
| 39053 chr10 manual_curation CDS 4769275 4769300 . - 0 Parent=GSCOCT00034745001 | |
| 39054 chr10 manual_curation CDS 4769129 4769207 . - 2 Parent=GSCOCT00034745001 | |
| 39055 chr10 manual_curation CDS 4768870 4768997 . - 0 Parent=GSCOCT00034745001 | |
| 39056 chr10 manual_curation CDS 4768472 4768583 . - 2 Parent=GSCOCT00034745001 | |
| 39057 chr10 manual_curation gene 4803343 4804081 . - . ID=GSCOCG00034739001;Name=Cc10_g05910 | |
| 39058 chr10 manual_curation mRNA 4803343 4804081 . - . ID=GSCOCT00034739001;Parent=GSCOCG00034739001;Name=Cc10_g05910 | |
| 39059 chr10 manual_curation polypeptide 4803656 4804081 . - . ID=GSCOCP00034739001;Dbxref=TrEMBL:B9H574,TrEMBL:F6H4N5,TrEMBL:I1LMZ4;Derives_from=GSCOCT00034739001;Name=Cc10_g05910;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034739001~ Uncharacterized protein~ unknown_gene~ fragment;original_location=4257121..4257546;owner=coffea | |
| 39060 chr10 manual_curation exon 4803343 4804081 . - . Parent=GSCOCT00034739001 | |
| 39061 chr10 manual_curation CDS 4803656 4804081 . - 0 Parent=GSCOCT00034739001 | |
| 39062 chr10 manual_curation gene 4837451 4841663 . + . ID=GSCOCG00034738001;Name=Cc10_g05920 | |
| 39063 chr10 manual_curation mRNA 4837451 4841663 . + . ID=GSCOCT00034738001;Parent=GSCOCG00034738001;Name=Cc10_g05920 | |
| 39064 chr10 manual_curation polypeptide 4838091 4841167 . + . ID=GSCOCP00034738001;Dbxref=InterPro:IPR000626,InterPro:IPR017000,InterPro:IPR019955,PFAM:PF00240,PIR:PIRSF032572,PROFILE:PS50053,SwissProt:Q6Z8K4,SwissProt:Q8GWJ6,SwissProt:Q9SH14,TAIR:AT1G22050.1,TAIR:AT1G77870.1,TAIR:AT3G26980.1,TrEMBL:B9RJE5,TrEMBL:E0CRF6,TrEMBL:Q9ZRD0;Derives_from=GSCOCT00034738001;Name=Cc10_g05920;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Membrane-anchored ubiquitin-fold protein 6,CC_functional_completeness:complete,CC_gene:MUB6,CC_gene:MUB3,CC_gene:MUB5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034738001~ Membrane-anchored ubiquitin-fold protein 6~ MUB6~ complete;original_location=complement(join(4222982..4223111%2C4221029..4221199%2C4220035..4220090));owner=coffea | |
| 39065 chr10 manual_curation exon 4841112 4841663 . + . Parent=GSCOCT00034738001 | |
| 39066 chr10 manual_curation exon 4840003 4840173 . + . Parent=GSCOCT00034738001 | |
| 39067 chr10 manual_curation exon 4837451 4838220 . + . Parent=GSCOCT00034738001 | |
| 39068 chr10 manual_curation CDS 4841112 4841167 . + 1 Parent=GSCOCT00034738001 | |
| 39069 chr10 manual_curation CDS 4840003 4840173 . + 1 Parent=GSCOCT00034738001 | |
| 39070 chr10 manual_curation CDS 4838091 4838220 . + 0 Parent=GSCOCT00034738001 | |
| 39071 chr10 manual_curation gene 4842133 4854785 . - . ID=GSCOCG00034737001;Name=Cc10_g05930 | |
| 39072 chr10 manual_curation mRNA 4842133 4854785 . - . ID=GSCOCT00034737001;Parent=GSCOCG00034737001;Name=Cc10_g05930 | |
| 39073 chr10 manual_curation polypeptide 4842471 4854785 . - . ID=GSCOCP00034737001;Dbxref=TAIR:AT1G22060.1,TAIR:AT5G41140.1,TAIR:AT5G52280.1,TrEMBL:B9RJE4,TrEMBL:D7KKZ6,TrEMBL:F4HZS8;Derives_from=GSCOCT00034737001;Name=Cc10_g05930;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative LOCATED IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034737001~ Putative LOCATED IN: vacuole%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: FBD%2C F-box and Leucine Rich Repeat domains containing protein (TAIR:AT1G22000.1)%3B Has 84739 Blast hits to 38714 proteins in 2257 species: Archae - 1436%3B Bacteria - 11314%3B Metazoa - 40747%3B Fungi - 7706%3B Plants - 4675%3B Viruses - 308%3B Other Eukaryotes - 18553 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(4206417..4206494%2C4207812..4208012%2C4208104..4208226%2C4209462..4209499%2C4209572..4209692%2C4210219..4210435%2C4210490..4213295%2C4213515..4214163%2C4214473..4215411%2C4216877..4217032%2C4217126..4217224%2C4217346..4217488%2C4218449..4218731);owner=coffea | |
| 39074 chr10 manual_curation exon 4854708 4854785 . - . Parent=GSCOCT00034737001 | |
| 39075 chr10 manual_curation exon 4853190 4853390 . - . Parent=GSCOCT00034737001 | |
| 39076 chr10 manual_curation exon 4852976 4853098 . - . Parent=GSCOCT00034737001 | |
| 39077 chr10 manual_curation exon 4851703 4851740 . - . Parent=GSCOCT00034737001 | |
| 39078 chr10 manual_curation exon 4851510 4851630 . - . Parent=GSCOCT00034737001 | |
| 39079 chr10 manual_curation exon 4850767 4850983 . - . Parent=GSCOCT00034737001 | |
| 39080 chr10 manual_curation exon 4847907 4850712 . - . Parent=GSCOCT00034737001 | |
| 39081 chr10 manual_curation exon 4847039 4847687 . - . Parent=GSCOCT00034737001 | |
| 39082 chr10 manual_curation exon 4845791 4846729 . - . Parent=GSCOCT00034737001 | |
| 39083 chr10 manual_curation exon 4844170 4844325 . - . Parent=GSCOCT00034737001 | |
| 39084 chr10 manual_curation exon 4843978 4844076 . - . Parent=GSCOCT00034737001 | |
| 39085 chr10 manual_curation exon 4843714 4843856 . - . Parent=GSCOCT00034737001 | |
| 39086 chr10 manual_curation exon 4842133 4842753 . - . Parent=GSCOCT00034737001 | |
| 39087 chr10 manual_curation CDS 4854708 4854785 . - 0 Parent=GSCOCT00034737001 | |
| 39088 chr10 manual_curation CDS 4853190 4853390 . - 0 Parent=GSCOCT00034737001 | |
| 39089 chr10 manual_curation CDS 4852976 4853098 . - 0 Parent=GSCOCT00034737001 | |
| 39090 chr10 manual_curation CDS 4851703 4851740 . - 0 Parent=GSCOCT00034737001 | |
| 39091 chr10 manual_curation CDS 4851510 4851630 . - 2 Parent=GSCOCT00034737001 | |
| 39092 chr10 manual_curation CDS 4850767 4850983 . - 0 Parent=GSCOCT00034737001 | |
| 39093 chr10 manual_curation CDS 4847907 4850712 . - 1 Parent=GSCOCT00034737001 | |
| 39094 chr10 manual_curation CDS 4847039 4847687 . - 2 Parent=GSCOCT00034737001 | |
| 39095 chr10 manual_curation CDS 4845791 4846729 . - 0 Parent=GSCOCT00034737001 | |
| 39096 chr10 manual_curation CDS 4844170 4844325 . - 0 Parent=GSCOCT00034737001 | |
| 39097 chr10 manual_curation CDS 4843978 4844076 . - 0 Parent=GSCOCT00034737001 | |
| 39098 chr10 manual_curation CDS 4843714 4843856 . - 0 Parent=GSCOCT00034737001 | |
| 39099 chr10 manual_curation CDS 4842471 4842753 . - 2 Parent=GSCOCT00034737001 | |
| 39100 chr10 manual_curation gene 4875944 4876510 . - . ID=GSCOCG00034734001;Name=Cc10_g05940 | |
| 39101 chr10 manual_curation mRNA 4875944 4876510 . - . ID=GSCOCT00034734001;Parent=GSCOCG00034734001;Name=Cc10_g05940 | |
| 39102 chr10 manual_curation polypeptide 4876173 4876424 . - . ID=GSCOCP00034734001;Derives_from=GSCOCT00034734001;Name=Cc10_g05940;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034734001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=4184778..4185029;owner=coffea | |
| 39103 chr10 manual_curation exon 4875944 4876510 . - . Parent=GSCOCT00034734001 | |
| 39104 chr10 manual_curation CDS 4876173 4876424 . - 0 Parent=GSCOCT00034734001 | |
| 39105 chr10 manual_curation gene 4878202 4879137 . - . ID=GSCOCG00034733001;Name=Cc10_g05950 | |
| 39106 chr10 manual_curation mRNA 4878202 4879137 . - . ID=GSCOCT00034733001;Parent=GSCOCG00034733001;Name=Cc10_g05950 | |
| 39107 chr10 manual_curation polypeptide 4878659 4878898 . - . ID=GSCOCP00034733001;Derives_from=GSCOCT00034733001;Name=Cc10_g05950;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034733001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=4182304..4182543;owner=coffea | |
| 39108 chr10 manual_curation exon 4878202 4879137 . - . Parent=GSCOCT00034733001 | |
| 39109 chr10 manual_curation CDS 4878659 4878898 . - 0 Parent=GSCOCT00034733001 | |
| 39110 chr10 manual_curation gene 4887784 4890144 . - . ID=GSCOCG00034731001;Name=Cc10_g05960 | |
| 39111 chr10 manual_curation mRNA 4887784 4890144 . - . ID=GSCOCT00034731001;Parent=GSCOCG00034731001;Name=Cc10_g05960 | |
| 39112 chr10 manual_curation polypeptide 4888273 4890144 . - . ID=GSCOCP00034731001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q0WNP3,SwissProt:Q3E6Q1,SwissProt:Q9STE1,TAIR:AT1G11290.1,TAIR:AT4G18520.1,TAIR:AT4G21300.1,TIGRFAMs:TIGR00756,TrEMBL:B9H778,TrEMBL:B9RJD6,TrEMBL:F6H0P3;Derives_from=GSCOCT00034731001;Name=Cc10_g05960;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At4g18520,CC_functional_completeness:complete,CC_gene:PCMP-A2,CC_gene:PCMP-E36,CC_gene:PCMP-H40;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034731001~ Pentatricopeptide repeat-containing protein At4g18520~ PCMP-A2~ complete;original_location=4171058..4172929;owner=coffea | |
| 39113 chr10 manual_curation exon 4887784 4890144 . - . Parent=GSCOCT00034731001 | |
| 39114 chr10 manual_curation CDS 4888273 4890144 . - 0 Parent=GSCOCT00034731001 | |
| 39115 chr10 manual_curation gene 4891180 4894058 . - . ID=GSCOCG00034730001;Name=Cc10_g05970 | |
| 39116 chr10 manual_curation mRNA 4891180 4894058 . - . ID=GSCOCT00034730001;Parent=GSCOCG00034730001;Name=Cc10_g05970 | |
| 39117 chr10 manual_curation polypeptide 4891549 4893517 . - . ID=GSCOCP00034730001;Dbxref=InterPro:IPR013216,PFAM:PF08241,SwissProt:A1A4L5,SwissProt:Q07G10,SwissProt:Q80Y20,TAIR:AT1G36310.1,TrEMBL:B9GUI4,TrEMBL:B9RJD9,TrEMBL:E0CRF2;Derives_from=GSCOCT00034730001;Name=Cc10_g05970;Ontology_term=CC_evidence_code:ISS,GO:0008152,GO:0008168,CC_EC_number:missing_EC_number,PRODUCT:Putative Alkylated DNA repair protein alkB homolog 8,CC_functional_completeness:fragment,CC_gene:Alkbh8,CC_gene:alkbh8,CC_gene:ALKBH8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034730001~ Putative Alkylated DNA repair protein alkB homolog 8~ Alkbh8~ fragment;original_location=join(4167685..4168670%2C4169566..4169653);owner=coffea | |
| 39118 chr10 manual_curation exon 4893937 4894058 . - . Parent=GSCOCT00034730001 | |
| 39119 chr10 manual_curation exon 4892532 4893651 . - . Parent=GSCOCT00034730001 | |
| 39120 chr10 manual_curation exon 4891180 4891636 . - . Parent=GSCOCT00034730001 | |
| 39121 chr10 manual_curation CDS 4892532 4893517 . - 0 Parent=GSCOCT00034730001 | |
| 39122 chr10 manual_curation CDS 4891549 4891636 . - 2 Parent=GSCOCT00034730001 | |
| 39123 chr10 manual_curation gene 4895761 4899809 . - . ID=GSCOCG00034729001;Name=Cc10_g05980 | |
| 39124 chr10 manual_curation mRNA 4895761 4899809 . - . ID=GSCOCT00034729001;Parent=GSCOCG00034729001;Name=Cc10_g05980 | |
| 39125 chr10 manual_curation polypeptide 4896043 4899809 . - . ID=GSCOCP00034729001;Dbxref=GENE3D:G3DSA:1.10.10.10,GENE3D:G3DSA:3.40.30.10,InterPro:IPR000591,InterPro:IPR002109,InterPro:IPR006869,InterPro:IPR011991,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR014025,PFAM:PF00462,PFAM:PF00610,PFAM:PF04784,PRINTS:PR00160,PROFILE:PS50186,PROFILE:PS51354,SMART:SM00049,SUPERFAMILY:SSF52833,TAIR:AT3G11920.1,TAIR:AT4G08550.1,TAIR:AT5G66600.4,TrEMBL:B9RJD7,TrEMBL:F6H0P4,TrEMBL:I1KA27;Derives_from=GSCOCT00034729001;Name=Cc10_g05980;Ontology_term=CC_evidence_code:ISS,GO:0009055,GO:0015035,GO:0023034,GO:0045454,CC_EC_number:missing_EC_number,PRODUCT:electron carriers%3Bprotein disulfide oxidoreductases,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034729001~ electron carriers%3Bprotein disulfide oxidoreductases~ unknown_gene~ fragment;original_location=join(4161393..4161549%2C4161607..4162265%2C4163386..4163441%2C4163530..4163760%2C4163862..4164153%2C4164605..4164801%2C4165006..4165159);owner=coffea | |
| 39126 chr10 manual_curation exon 4899653 4899809 . - . Parent=GSCOCT00034729001 | |
| 39127 chr10 manual_curation exon 4898937 4899595 . - . Parent=GSCOCT00034729001 | |
| 39128 chr10 manual_curation exon 4897761 4897816 . - . Parent=GSCOCT00034729001 | |
| 39129 chr10 manual_curation exon 4897442 4897672 . - . Parent=GSCOCT00034729001 | |
| 39130 chr10 manual_curation exon 4897049 4897340 . - . Parent=GSCOCT00034729001 | |
| 39131 chr10 manual_curation exon 4896401 4896597 . - . Parent=GSCOCT00034729001 | |
| 39132 chr10 manual_curation exon 4895761 4896196 . - . Parent=GSCOCT00034729001 | |
| 39133 chr10 manual_curation CDS 4899653 4899809 . - 0 Parent=GSCOCT00034729001 | |
| 39134 chr10 manual_curation CDS 4898937 4899595 . - 1 Parent=GSCOCT00034729001 | |
| 39135 chr10 manual_curation CDS 4897761 4897816 . - 0 Parent=GSCOCT00034729001 | |
| 39136 chr10 manual_curation CDS 4897442 4897672 . - 2 Parent=GSCOCT00034729001 | |
| 39137 chr10 manual_curation CDS 4897049 4897340 . - 2 Parent=GSCOCT00034729001 | |
| 39138 chr10 manual_curation CDS 4896401 4896597 . - 0 Parent=GSCOCT00034729001 | |
| 39139 chr10 manual_curation CDS 4896043 4896196 . - 2 Parent=GSCOCT00034729001 | |
| 39140 chr10 manual_curation gene 4899878 4901560 . - . ID=GSCOCG00034728001;Name=Cc10_g05990 | |
| 39141 chr10 manual_curation mRNA 4899878 4901560 . - . ID=GSCOCT00034728001;Parent=GSCOCG00034728001;Name=Cc10_g05990 | |
| 39142 chr10 manual_curation polypeptide 4900399 4901560 . - . ID=GSCOCP00034728001;Derives_from=GSCOCT00034728001;Name=Cc10_g05990;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034728001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(4159642..4159865%2C4160749..4160803);owner=coffea | |
| 39143 chr10 manual_curation exon 4901337 4901560 . - . Parent=GSCOCT00034728001 | |
| 39144 chr10 manual_curation exon 4899878 4900453 . - . Parent=GSCOCT00034728001 | |
| 39145 chr10 manual_curation CDS 4901337 4901560 . - 0 Parent=GSCOCT00034728001 | |
| 39146 chr10 manual_curation CDS 4900399 4900453 . - 2 Parent=GSCOCT00034728001 | |
| 39147 chr10 manual_curation gene 4906322 4906825 . + . ID=GSCOCG00034726001;Name=Cc10_g06000 | |
| 39148 chr10 manual_curation mRNA 4906322 4906825 . + . ID=GSCOCT00034726001;Parent=GSCOCG00034726001;Name=Cc10_g06000 | |
| 39149 chr10 manual_curation polypeptide 4906322 4906825 . + . ID=GSCOCP00034726001;Dbxref=InterPro:IPR001841,InterPro:IPR018957,PFAM:PF00097,PROFILE:PS50089,SMART:SM00184,SwissProt:Q6NML0,SwissProt:Q94BY6,TAIR:AT1G49200.1,TAIR:AT1G49210.1,TAIR:AT1G63840.1,TrEMBL:B9H582,TrEMBL:B9HFQ5,TrEMBL:F6H4P0;Derives_from=GSCOCT00034726001;Name=Cc10_g06000;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative RING/U-box superfamily protein,CC_functional_completeness:modules,CC_gene:ATL76,CC_gene:ATL75;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034726001~ Putative RING/U-box superfamily protein~ ATL76~ modules;original_location=complement(4154377..4154880);owner=coffea | |
| 39150 chr10 manual_curation exon 4906322 4906825 . + . Parent=GSCOCT00034726001 | |
| 39151 chr10 manual_curation CDS 4906322 4906825 . + 0 Parent=GSCOCT00034726001 | |
| 39152 chr10 manual_curation gene 4915945 4922994 . + . ID=GSCOCG00034725001;Name=Cc10_g06010 | |
| 39153 chr10 manual_curation mRNA 4915945 4922994 . + . ID=GSCOCT00034725001;Parent=GSCOCG00034725001;Name=Cc10_g06010 | |
| 39154 chr10 manual_curation polypeptide 4916148 4922481 . + . ID=GSCOCP00034725001;Dbxref=SwissProt:Q84WN0,TAIR:AT1G36320.1,TAIR:AT4G37920.1,TrEMBL:B9GUI1,TrEMBL:B9RJD5,TrEMBL:E0CRE9;Derives_from=GSCOCT00034725001;Name=Cc10_g06010;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:modules,CC_gene:At4g37920;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034725001~ unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37920.1)%3B Has 93 Blast hits to 90 proteins in 22 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 85%3B Viruses - 0%3B Other Eukaryotes - 8 (source: NCBI BLink).~ At4g37920~ modules;original_location=complement(join(4144904..4145054%2C4143515..4143903%2C4142867..4143035%2C4139579..4139823%2C4139145..4139332%2C4138721..4138880));owner=coffea | |
| 39155 chr10 manual_curation exon 4922322 4922994 . + . Parent=GSCOCT00034725001 | |
| 39156 chr10 manual_curation exon 4921870 4922057 . + . Parent=GSCOCT00034725001 | |
| 39157 chr10 manual_curation exon 4921379 4921623 . + . Parent=GSCOCT00034725001 | |
| 39158 chr10 manual_curation exon 4918167 4918335 . + . Parent=GSCOCT00034725001 | |
| 39159 chr10 manual_curation exon 4917299 4917687 . + . Parent=GSCOCT00034725001 | |
| 39160 chr10 manual_curation exon 4915945 4916298 . + . Parent=GSCOCT00034725001 | |
| 39161 chr10 manual_curation CDS 4922322 4922481 . + 2 Parent=GSCOCT00034725001 | |
| 39162 chr10 manual_curation CDS 4921870 4922057 . + 0 Parent=GSCOCT00034725001 | |
| 39163 chr10 manual_curation CDS 4921379 4921623 . + 1 Parent=GSCOCT00034725001 | |
| 39164 chr10 manual_curation CDS 4918167 4918335 . + 0 Parent=GSCOCT00034725001 | |
| 39165 chr10 manual_curation CDS 4917299 4917687 . + 1 Parent=GSCOCT00034725001 | |
| 39166 chr10 manual_curation CDS 4916148 4916298 . + 0 Parent=GSCOCT00034725001 | |
| 39167 chr10 manual_curation gene 4924586 4925436 . - . ID=GSCOCG00034723001;Name=Cc10_g06020 | |
| 39168 chr10 manual_curation mRNA 4924586 4925436 . - . ID=GSCOCT00034723001;Parent=GSCOCG00034723001;Name=Cc10_g06020 | |
| 39169 chr10 manual_curation polypeptide 4924930 4925436 . - . ID=GSCOCP00034723001;Dbxref=InterPro:IPR001841,InterPro:IPR018957,PFAM:PF00097,PROFILE:PS50089,SMART:SM00184,SwissProt:Q9XF63,SwissProt:Q9ZT50,SwissProt:Q9ZU51,TAIR:AT1G15100.1,TAIR:AT1G72310.1,TAIR:AT2G01150.1,TrEMBL:B9H581,TrEMBL:B9HFQ5,TrEMBL:B9NKZ7;Derives_from=GSCOCT00034723001;Name=Cc10_g06020;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative Predicted protein,CC_functional_completeness:complete,CC_gene:RHA2A,CC_gene:RHA2B,CC_gene:ATL3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034723001~ Putative Predicted protein~ RHA2A~ complete;original_location=4135766..4136272;owner=coffea | |
| 39170 chr10 manual_curation exon 4924586 4925436 . - . Parent=GSCOCT00034723001 | |
| 39171 chr10 manual_curation CDS 4924930 4925436 . - 0 Parent=GSCOCT00034723001 | |
| 39172 chr10 manual_curation gene 4927974 4934584 . + . ID=GSCOCG00034722001;Name=Cc10_g06030 | |
| 39173 chr10 manual_curation mRNA 4927974 4934584 . + . ID=GSCOCT00034722001;Parent=GSCOCG00034722001;Name=Cc10_g06030 | |
| 39174 chr10 manual_curation polypeptide 4928316 4933565 . + . ID=GSCOCP00034722001;Dbxref=InterPro:IPR007243,PFAM:PF04111,TAIR:AT1G77890.1,TAIR:AT4G08540.1,TrEMBL:B9GUI0,TrEMBL:B9T6K6,TrEMBL:E0CRE8;Derives_from=GSCOCT00034722001;Name=Cc10_g06030;Ontology_term=CC_evidence_code:ISS,GO:0006914,CC_EC_number:missing_EC_number,PRODUCT:DNA-directed RNA polymerase II protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034722001~ DNA-directed RNA polymerase II protein~ unknown_gene~ complete;original_location=complement(join(4132804..4132886%2C4132606..4132693%2C4131892..4131991%2C4131718..4131791%2C4131525..4131596%2C4131315..4131392%2C4131084..4131208%2C4130394..4130466%2C4129376..4129437%2C4128904..4129284%2C4128367..4128469%2C4127637..4127837));owner=coffea | |
| 39175 chr10 manual_curation exon 4933365 4934584 . + . Parent=GSCOCT00034722001 | |
| 39176 chr10 manual_curation exon 4932733 4932835 . + . Parent=GSCOCT00034722001 | |
| 39177 chr10 manual_curation exon 4931918 4932298 . + . Parent=GSCOCT00034722001 | |
| 39178 chr10 manual_curation exon 4931765 4931826 . + . Parent=GSCOCT00034722001 | |
| 39179 chr10 manual_curation exon 4930736 4930808 . + . Parent=GSCOCT00034722001 | |
| 39180 chr10 manual_curation exon 4929994 4930118 . + . Parent=GSCOCT00034722001 | |
| 39181 chr10 manual_curation exon 4929810 4929887 . + . Parent=GSCOCT00034722001 | |
| 39182 chr10 manual_curation exon 4929606 4929677 . + . Parent=GSCOCT00034722001 | |
| 39183 chr10 manual_curation exon 4929411 4929484 . + . Parent=GSCOCT00034722001 | |
| 39184 chr10 manual_curation exon 4929211 4929310 . + . Parent=GSCOCT00034722001 | |
| 39185 chr10 manual_curation exon 4928509 4928596 . + . Parent=GSCOCT00034722001 | |
| 39186 chr10 manual_curation exon 4927974 4928398 . + . Parent=GSCOCT00034722001 | |
| 39187 chr10 manual_curation CDS 4933365 4933565 . + 0 Parent=GSCOCT00034722001 | |
| 39188 chr10 manual_curation CDS 4932733 4932835 . + 2 Parent=GSCOCT00034722001 | |
| 39189 chr10 manual_curation CDS 4931918 4932298 . + 2 Parent=GSCOCT00034722001 | |
| 39190 chr10 manual_curation CDS 4931765 4931826 . + 0 Parent=GSCOCT00034722001 | |
| 39191 chr10 manual_curation CDS 4930736 4930808 . + 2 Parent=GSCOCT00034722001 | |
| 39192 chr10 manual_curation CDS 4929994 4930118 . + 0 Parent=GSCOCT00034722001 | |
| 39193 chr10 manual_curation CDS 4929810 4929887 . + 0 Parent=GSCOCT00034722001 | |
| 39194 chr10 manual_curation CDS 4929606 4929677 . + 0 Parent=GSCOCT00034722001 | |
| 39195 chr10 manual_curation CDS 4929411 4929484 . + 1 Parent=GSCOCT00034722001 | |
| 39196 chr10 manual_curation CDS 4929211 4929310 . + 0 Parent=GSCOCT00034722001 | |
| 39197 chr10 manual_curation CDS 4928509 4928596 . + 2 Parent=GSCOCT00034722001 | |
| 39198 chr10 manual_curation CDS 4928316 4928398 . + 0 Parent=GSCOCT00034722001 | |
| 39199 chr10 manual_curation gene 4934743 4937636 . - . ID=GSCOCG00034721001;Name=Cc10_g06040 | |
| 39200 chr10 manual_curation mRNA 4934743 4937636 . - . ID=GSCOCT00034721001;Parent=GSCOCG00034721001;Name=Cc10_g06040 | |
| 39201 chr10 manual_curation polypeptide 4935025 4936647 . - . ID=GSCOCP00034721001;Derives_from=GSCOCT00034721001;Name=Cc10_g06040;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034721001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(4124555..4124674%2C4125686..4126177);owner=coffea | |
| 39202 chr10 manual_curation exon 4936528 4937636 . - . Parent=GSCOCT00034721001 | |
| 39203 chr10 manual_curation exon 4934743 4935516 . - . Parent=GSCOCT00034721001 | |
| 39204 chr10 manual_curation CDS 4936528 4936647 . - 0 Parent=GSCOCT00034721001 | |
| 39205 chr10 manual_curation CDS 4935025 4935516 . - 0 Parent=GSCOCT00034721001 | |
| 39206 chr10 manual_curation gene 4950295 4955261 . + . ID=GSCOCG00034718001;Name=Cc10_g06050 | |
| 39207 chr10 manual_curation mRNA 4950295 4955261 . + . ID=GSCOCT00034718001;Parent=GSCOCG00034718001;Name=Cc10_g06050 | |
| 39208 chr10 manual_curation polypeptide 4951268 4955076 . + . ID=GSCOCP00034718001;Dbxref=InterPro:IPR004827,InterPro:IPR011616,PFAM:PF00170,PROSITE:PS00036,SMART:SM00338,SwissProt:Q39162,SwissProt:Q39237,SwissProt:Q93ZE2,TAIR:AT1G77920.1,TAIR:AT5G10030.1,TAIR:AT5G65210.2,TrEMBL:B9H780,TrEMBL:B9RJD3,TrEMBL:F6H0P0;Derives_from=GSCOCT00034718001;Name=Cc10_g06050;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0043565,GO:0046983,CC_EC_number:missing_EC_number,PRODUCT:Transcription factor TGA7,CC_functional_completeness:complete,CC_gene:TGA7,CC_gene:TGA1,CC_gene:TGA4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034718001~ Transcription factor TGA7~ TGA7~ complete;original_location=complement(join(4109770..4109934%2C4109619..4109690%2C4109354..4109413%2C4109192..4109269%2C4109047..4109104%2C4107987..4108258%2C4107430..4107657%2C4106126..4106281));owner=coffea | |
| 39209 chr10 manual_curation exon 4950295 4950481 . + . Parent=GSCOCT00034718001 | |
| 39210 chr10 manual_curation exon 4954921 4955261 . + . Parent=GSCOCT00034718001 | |
| 39211 chr10 manual_curation exon 4953545 4953772 . + . Parent=GSCOCT00034718001 | |
| 39212 chr10 manual_curation exon 4952944 4953215 . + . Parent=GSCOCT00034718001 | |
| 39213 chr10 manual_curation exon 4952098 4952155 . + . Parent=GSCOCT00034718001 | |
| 39214 chr10 manual_curation exon 4951933 4952010 . + . Parent=GSCOCT00034718001 | |
| 39215 chr10 manual_curation exon 4951789 4951848 . + . Parent=GSCOCT00034718001 | |
| 39216 chr10 manual_curation exon 4951512 4951583 . + . Parent=GSCOCT00034718001 | |
| 39217 chr10 manual_curation exon 4951250 4951432 . + . Parent=GSCOCT00034718001 | |
| 39218 chr10 manual_curation CDS 4954921 4955076 . + 0 Parent=GSCOCT00034718001 | |
| 39219 chr10 manual_curation CDS 4953545 4953772 . + 0 Parent=GSCOCT00034718001 | |
| 39220 chr10 manual_curation CDS 4952944 4953215 . + 1 Parent=GSCOCT00034718001 | |
| 39221 chr10 manual_curation CDS 4952098 4952155 . + 0 Parent=GSCOCT00034718001 | |
| 39222 chr10 manual_curation CDS 4951933 4952010 . + 0 Parent=GSCOCT00034718001 | |
| 39223 chr10 manual_curation CDS 4951789 4951848 . + 0 Parent=GSCOCT00034718001 | |
| 39224 chr10 manual_curation CDS 4951512 4951583 . + 0 Parent=GSCOCT00034718001 | |
| 39225 chr10 manual_curation CDS 4951268 4951432 . + 0 Parent=GSCOCT00034718001 | |
| 39226 chr10 manual_curation gene 4956029 4959738 . + . ID=GSCOCG00034717001;Name=Cc10_g06060 | |
| 39227 chr10 manual_curation mRNA 4956029 4959738 . + . ID=GSCOCT00034717001;Parent=GSCOCG00034717001;Name=Cc10_g06060 | |
| 39228 chr10 manual_curation polypeptide 4956105 4959738 . + . ID=GSCOCP00034717001;Dbxref=GENE3D:G3DSA:1.10.287.110,InterPro:IPR001623,InterPro:IPR015609,InterPro:IPR018253,PANTHER:PTHR11821,PFAM:PF00226,PROFILE:PS50076,PROSITE:PS00636,SMART:SM00271,SUPERFAMILY:SSF46565,TAIR:AT1G77930.1,TrEMBL:D7KV56,TrEMBL:E0CRE4,TrEMBL:Q9SH08;Derives_from=GSCOCT00034717001;Name=Cc10_g06060;Ontology_term=CC_evidence_code:ISS,GO:0031072,CC_EC_number:missing_EC_number,PRODUCT:Chaperone DnaJ-domain superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034717001~ Chaperone DnaJ-domain superfamily protein~ unknown_gene~ complete;original_location=complement(join(4104812..4105097%2C4104148..4104222%2C4103014..4103153%2C4102012..4102149%2C4101464..4101673));owner=coffea | |
| 39229 chr10 manual_curation exon 4959529 4959738 . + . Parent=GSCOCT00034717001 | |
| 39230 chr10 manual_curation exon 4959053 4959190 . + . Parent=GSCOCT00034717001 | |
| 39231 chr10 manual_curation exon 4958049 4958188 . + . Parent=GSCOCT00034717001 | |
| 39232 chr10 manual_curation exon 4956980 4957054 . + . Parent=GSCOCT00034717001 | |
| 39233 chr10 manual_curation exon 4956029 4956390 . + . Parent=GSCOCT00034717001 | |
| 39234 chr10 manual_curation CDS 4959529 4959738 . + 0 Parent=GSCOCT00034717001 | |
| 39235 chr10 manual_curation CDS 4959053 4959190 . + 0 Parent=GSCOCT00034717001 | |
| 39236 chr10 manual_curation CDS 4958049 4958188 . + 1 Parent=GSCOCT00034717001 | |
| 39237 chr10 manual_curation CDS 4956980 4957054 . + 1 Parent=GSCOCT00034717001 | |
| 39238 chr10 manual_curation CDS 4956105 4956390 . + 0 Parent=GSCOCT00034717001 | |
| 39239 chr10 manual_curation gene 4960191 4964382 . - . ID=GSCOCG00034715001;Name=Cc10_g06070 | |
| 39240 chr10 manual_curation mRNA 4960191 4964382 . - . ID=GSCOCT00034715001;Parent=GSCOCG00034715001;Name=Cc10_g06070 | |
| 39241 chr10 manual_curation polypeptide 4960283 4963227 . - . ID=GSCOCP00034715001;Dbxref=GENE3D:G3DSA:3.40.50.10300,InterPro:IPR007085,PFAM:PF04127,SUPERFAMILY:SSF102645,SwissProt:Q8GXR5,SwissProt:Q9HAB8,SwissProt:Q9LZM3,TAIR:AT1G12350.1,TAIR:AT5G02080.1,TrEMBL:A5B9R7,TrEMBL:B9GUH6,TrEMBL:B9RJD1;Derives_from=GSCOCT00034715001;Name=Cc10_g06070;Ontology_term=CC_evidence_code:ISS,CC_EC_number:6.3.2.5,PRODUCT:Phosphopantothenate--cysteine ligase 2,CC_functional_completeness:complete,CC_gene:PPCS2,CC_gene:PPCS1,CC_gene:PPCS;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034715001~ Phosphopantothenate--cysteine ligase 2~ PPCS2~ complete;original_location=join(4097975..4097981%2C4098053..4098176%2C4098262..4098306%2C4098429..4098514%2C4099023..4099075%2C4099154..4099213%2C4099374..4099475%2C4100167..4100286%2C4100680..4100919);owner=coffea | |
| 39242 chr10 manual_curation exon 4964242 4964382 . - . Parent=GSCOCT00034715001 | |
| 39243 chr10 manual_curation exon 4963221 4963424 . - . Parent=GSCOCT00034715001 | |
| 39244 chr10 manual_curation exon 4963026 4963149 . - . Parent=GSCOCT00034715001 | |
| 39245 chr10 manual_curation exon 4962896 4962940 . - . Parent=GSCOCT00034715001 | |
| 39246 chr10 manual_curation exon 4962688 4962773 . - . Parent=GSCOCT00034715001 | |
| 39247 chr10 manual_curation exon 4962127 4962179 . - . Parent=GSCOCT00034715001 | |
| 39248 chr10 manual_curation exon 4961989 4962048 . - . Parent=GSCOCT00034715001 | |
| 39249 chr10 manual_curation exon 4961727 4961828 . - . Parent=GSCOCT00034715001 | |
| 39250 chr10 manual_curation exon 4960916 4961035 . - . Parent=GSCOCT00034715001 | |
| 39251 chr10 manual_curation exon 4960191 4960522 . - . Parent=GSCOCT00034715001 | |
| 39252 chr10 manual_curation CDS 4963221 4963227 . - 0 Parent=GSCOCT00034715001 | |
| 39253 chr10 manual_curation CDS 4963026 4963149 . - 1 Parent=GSCOCT00034715001 | |
| 39254 chr10 manual_curation CDS 4962896 4962940 . - 2 Parent=GSCOCT00034715001 | |
| 39255 chr10 manual_curation CDS 4962688 4962773 . - 2 Parent=GSCOCT00034715001 | |
| 39256 chr10 manual_curation CDS 4962127 4962179 . - 1 Parent=GSCOCT00034715001 | |
| 39257 chr10 manual_curation CDS 4961989 4962048 . - 0 Parent=GSCOCT00034715001 | |
| 39258 chr10 manual_curation CDS 4961727 4961828 . - 0 Parent=GSCOCT00034715001 | |
| 39259 chr10 manual_curation CDS 4960916 4961035 . - 0 Parent=GSCOCT00034715001 | |
| 39260 chr10 manual_curation CDS 4960283 4960522 . - 0 Parent=GSCOCT00034715001 | |
| 39261 chr10 manual_curation gene 4972074 4973116 . - . ID=GSCOCG00034712001;Name=Cc10_g06080 | |
| 39262 chr10 manual_curation mRNA 4972074 4973116 . - . ID=GSCOCT00034712001;Parent=GSCOCG00034712001;Name=Cc10_g06080 | |
| 39263 chr10 manual_curation polypeptide 4972311 4973072 . - . ID=GSCOCP00034712001;Dbxref=GENE3D:G3DSA:1.10.520.20,HAMAP:MF_01416,InterPro:IPR000711,InterPro:IPR020781,PANTHER:PTHR11910,PFAM:PF00213,PRINTS:PR00125,PROSITE:PS00389,SUPERFAMILY:SSF47928,SwissProt:P11402,SwissProt:P32980,SwissProt:Q02758,TAIR:AT4G09650.1,TIGRFAMs:TIGR01145,TrEMBL:B9IQM7,TrEMBL:F6HVW3,TrEMBL:Q8RY87;Derives_from=GSCOCT00034712001;Name=Cc10_g06080;Ontology_term=CC_evidence_code:ISS,GO:0005886,GO:0015986,CC_EC_number:3.6.3.14,PRODUCT:ATP synthase delta chain%2C chloroplastic,CC_functional_completeness:complete,CC_gene:ATPD;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034712001~ ATP synthase delta chain%2C chloroplastic~ ATPD~ complete;original_location=4088130..4088891;owner=coffea | |
| 39264 chr10 manual_curation exon 4972074 4973116 . - . Parent=GSCOCT00034712001 | |
| 39265 chr10 manual_curation CDS 4972311 4973072 . - 0 Parent=GSCOCT00034712001 | |
| 39266 chr10 manual_curation gene 4976863 4979541 . + . ID=GSCOCG00034711001;Name=Cc10_g06090 | |
| 39267 chr10 manual_curation mRNA 4976863 4979541 . + . ID=GSCOCT00034711001;Parent=GSCOCG00034711001;Name=Cc10_g06090 | |
| 39268 chr10 manual_curation polypeptide 4976998 4979081 . + . ID=GSCOCP00034711001;Dbxref=InterPro:IPR003690,PFAM:PF02536,SMART:SM00733,TAIR:AT1G21150.1,TAIR:AT5G07900.1,TAIR:AT5G64950.1,TrEMBL:B9SL56,TrEMBL:B9TC56,TrEMBL:D7SW46;Derives_from=GSCOCT00034711001;Name=Cc10_g06090;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Mitochondrial transcription termination factor family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034711001~ Putative Mitochondrial transcription termination factor family protein~ unknown_gene~ complete;original_location=complement(join(4083042..4084204%2C4082121..4082163));owner=coffea | |
| 39269 chr10 manual_curation exon 4979039 4979541 . + . Parent=GSCOCT00034711001 | |
| 39270 chr10 manual_curation exon 4976863 4978160 . + . Parent=GSCOCT00034711001 | |
| 39271 chr10 manual_curation CDS 4979039 4979081 . + 2 Parent=GSCOCT00034711001 | |
| 39272 chr10 manual_curation CDS 4976998 4978160 . + 0 Parent=GSCOCT00034711001 | |
| 39273 chr10 manual_curation gene 4995693 4996353 . + . ID=GSCOCG00034704001;Name=Cc10_g06100 | |
| 39274 chr10 manual_curation mRNA 4995693 4996353 . + . ID=GSCOCT00034704001;Parent=GSCOCG00034704001;Name=Cc10_g06100 | |
| 39275 chr10 manual_curation polypeptide 4995849 4996353 . + . ID=GSCOCP00034704001;Derives_from=GSCOCT00034704001;Name=Cc10_g06100;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034704001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(4065147..4065353%2C4064849..4064869));owner=coffea | |
| 39276 chr10 manual_curation exon 4996333 4996353 . + . Parent=GSCOCT00034704001 | |
| 39277 chr10 manual_curation exon 4995693 4996055 . + . Parent=GSCOCT00034704001 | |
| 39278 chr10 manual_curation CDS 4996333 4996353 . + 0 Parent=GSCOCT00034704001 | |
| 39279 chr10 manual_curation CDS 4995849 4996055 . + 0 Parent=GSCOCT00034704001 | |
| 39280 chr10 manual_curation gene 4996414 4997973 . + . ID=GSCOCG00034703001;Name=Cc10_g06110 | |
| 39281 chr10 manual_curation mRNA 4996414 4997973 . + . ID=GSCOCT00034703001;Parent=GSCOCG00034703001;Name=Cc10_g06110 | |
| 39282 chr10 manual_curation polypeptide 4996438 4997671 . + . ID=GSCOCP00034703001;Derives_from=GSCOCT00034703001;Name=Cc10_g06110;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034703001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(4064753..4064764%2C4064204..4064308%2C4063531..4063593));owner=coffea | |
| 39283 chr10 manual_curation exon 4997609 4997973 . + . Parent=GSCOCT00034703001 | |
| 39284 chr10 manual_curation exon 4996894 4996998 . + . Parent=GSCOCT00034703001 | |
| 39285 chr10 manual_curation exon 4996414 4996449 . + . Parent=GSCOCT00034703001 | |
| 39286 chr10 manual_curation CDS 4997609 4997671 . + 0 Parent=GSCOCT00034703001 | |
| 39287 chr10 manual_curation CDS 4996894 4996998 . + 0 Parent=GSCOCT00034703001 | |
| 39288 chr10 manual_curation CDS 4996438 4996449 . + 0 Parent=GSCOCT00034703001 | |
| 39289 chr10 manual_curation gene 4999467 4999916 . + . ID=GSCOCG00034701001;Name=Cc10_g06120 | |
| 39290 chr10 manual_curation mRNA 4999467 4999916 . + . ID=GSCOCT00034701001;Parent=GSCOCG00034701001;Name=Cc10_g06120 | |
| 39291 chr10 manual_curation polypeptide 4999467 4999916 . + . ID=GSCOCP00034701001;Dbxref=InterPro:IPR003690,PFAM:PF02536,SMART:SM00733,TAIR:AT1G21150.1,TAIR:AT5G07900.1,TAIR:AT5G64950.1,TrEMBL:A5BJ44,TrEMBL:B9GLT8,TrEMBL:F6HZN0;Derives_from=GSCOCT00034701001;Name=Cc10_g06120;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Mitochondrial transcription termination factor family protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034701001~ Putative Mitochondrial transcription termination factor family protein~ unknown_gene~ fragment;original_location=complement(4061286..4061735);owner=coffea | |
| 39292 chr10 manual_curation exon 4999467 4999916 . + . Parent=GSCOCT00034701001 | |
| 39293 chr10 manual_curation CDS 4999467 4999916 . + 0 Parent=GSCOCT00034701001 | |
| 39294 chr10 manual_curation gene 5004020 5005406 . - . ID=GSCOCG00034698001;Name=Cc10_g06130 | |
| 39295 chr10 manual_curation mRNA 5004020 5005406 . - . ID=GSCOCT00034698001;Parent=GSCOCG00034698001;Name=Cc10_g06130 | |
| 39296 chr10 manual_curation polypeptide 5004020 5004214 . - . ID=GSCOCP00034698001;Derives_from=GSCOCT00034698001;Name=Cc10_g06130;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034698001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=4056988..4057182;owner=coffea | |
| 39297 chr10 manual_curation exon 5004020 5005406 . - . Parent=GSCOCT00034698001 | |
| 39298 chr10 manual_curation CDS 5004020 5004214 . - 0 Parent=GSCOCT00034698001 | |
| 39299 chr10 manual_curation gene 5005458 5007134 . - . ID=GSCOCG00034697001;Name=Cc10_g06140 | |
| 39300 chr10 manual_curation mRNA 5005458 5007134 . - . ID=GSCOCT00034697001;Parent=GSCOCG00034697001;Name=Cc10_g06140 | |
| 39301 chr10 manual_curation polypeptide 5005968 5007134 . - . ID=GSCOCP00034697001;Dbxref=InterPro:IPR003690,PFAM:PF02536,SMART:SM00733,TAIR:AT1G21150.1,TAIR:AT5G07900.1,TAIR:AT5G64950.1,TrEMBL:D7SW46,TrEMBL:F2CXP2,TrEMBL:F2E767;Derives_from=GSCOCT00034697001;Name=Cc10_g06140;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034697001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=4054068..4055234;owner=coffea | |
| 39302 chr10 manual_curation exon 5005458 5007134 . - . Parent=GSCOCT00034697001 | |
| 39303 chr10 manual_curation CDS 5005968 5007134 . - 0 Parent=GSCOCT00034697001 | |
| 39304 chr10 manual_curation gene 5008017 5012084 . + . ID=GSCOCG00034696001;Name=Cc10_g06150 | |
| 39305 chr10 manual_curation mRNA 5008017 5012084 . + . ID=GSCOCT00034696001;Parent=GSCOCG00034696001;Name=Cc10_g06150 | |
| 39306 chr10 manual_curation polypeptide 5008346 5011739 . + . ID=GSCOCP00034696001;Dbxref=InterPro:IPR005061,PFAM:PF03398,SwissProt:P53990,SwissProt:Q54I39,SwissProt:Q568Z6,TAIR:AT1G25420.1,TAIR:AT1G34220.1,TAIR:AT4G35730.1,TrEMBL:B9T8C2,TrEMBL:F6HVW4,TrEMBL:Q3LHL2;Derives_from=GSCOCT00034696001;Name=Cc10_g06150;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Regulator of Vps4 activity in the MVB pathway protein,CC_functional_completeness:fragment,CC_gene:DDB_G0289029,CC_gene:IST1,CC_gene:Ist1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034696001~ Regulator of Vps4 activity in the MVB pathway protein~ DDB_G0289029~ fragment;original_location=complement(join(4052813..4052856%2C4052435..4052567%2C4052204..4052307%2C4050798..4050969%2C4050539..4050679%2C4049463..4050461));owner=coffea | |
| 39307 chr10 manual_curation exon 5008017 5008157 . + . Parent=GSCOCT00034696001 | |
| 39308 chr10 manual_curation exon 5010741 5012084 . + . Parent=GSCOCT00034696001 | |
| 39309 chr10 manual_curation exon 5010523 5010663 . + . Parent=GSCOCT00034696001 | |
| 39310 chr10 manual_curation exon 5010233 5010404 . + . Parent=GSCOCT00034696001 | |
| 39311 chr10 manual_curation exon 5008895 5008998 . + . Parent=GSCOCT00034696001 | |
| 39312 chr10 manual_curation exon 5008635 5008767 . + . Parent=GSCOCT00034696001 | |
| 39313 chr10 manual_curation exon 5008336 5008389 . + . Parent=GSCOCT00034696001 | |
| 39314 chr10 manual_curation CDS 5010741 5011739 . + 0 Parent=GSCOCT00034696001 | |
| 39315 chr10 manual_curation CDS 5010523 5010663 . + 0 Parent=GSCOCT00034696001 | |
| 39316 chr10 manual_curation CDS 5010233 5010404 . + 2 Parent=GSCOCT00034696001 | |
| 39317 chr10 manual_curation CDS 5008895 5008998 . + 0 Parent=GSCOCT00034696001 | |
| 39318 chr10 manual_curation CDS 5008635 5008767 . + 2 Parent=GSCOCT00034696001 | |
| 39319 chr10 manual_curation CDS 5008346 5008389 . + 0 Parent=GSCOCT00034696001 | |
| 39320 chr10 manual_curation gene 5014564 5021682 . - . ID=GSCOCG00034695001;Name=Cc10_g06160 | |
| 39321 chr10 manual_curation mRNA 5014564 5021682 . - . ID=GSCOCT00034695001;Parent=GSCOCG00034695001;Name=Cc10_g06160 | |
| 39322 chr10 manual_curation polypeptide 5014853 5021050 . - . ID=GSCOCP00034695001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q94AG2,SwissProt:Q94F62,SwissProt:Q9XIC7,TAIR:AT1G34210.1,TAIR:AT1G71830.1,TAIR:AT4G33430.2,TrEMBL:A3R789,TrEMBL:A6N8J2,TrEMBL:G0XZA3;Derives_from=GSCOCT00034695001;Name=Cc10_g06160;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Somatic embryogenesis receptor kinase 1,CC_functional_completeness:complete,CC_gene:SERK1,CC_gene:SERK2,CC_gene:BAK1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034695001~ Somatic embryogenesis receptor kinase 1~ SERK1~ complete;original_location=join(4040152..4040239%2C4040823..4040955%2C4041073..4041144%2C4043380..4043523%2C4043739..4043810%2C4043947..4044018%2C4044103..4044215%2C4044573..4044704%2C4044783..4045124%2C4045411..4045805%2C4046035..4046349);owner=coffea | |
| 39323 chr10 manual_curation exon 5020963 5021682 . - . Parent=GSCOCT00034695001 | |
| 39324 chr10 manual_curation exon 5020247 5020379 . - . Parent=GSCOCT00034695001 | |
| 39325 chr10 manual_curation exon 5020058 5020129 . - . Parent=GSCOCT00034695001 | |
| 39326 chr10 manual_curation exon 5017679 5017822 . - . Parent=GSCOCT00034695001 | |
| 39327 chr10 manual_curation exon 5017392 5017463 . - . Parent=GSCOCT00034695001 | |
| 39328 chr10 manual_curation exon 5017184 5017255 . - . Parent=GSCOCT00034695001 | |
| 39329 chr10 manual_curation exon 5016987 5017099 . - . Parent=GSCOCT00034695001 | |
| 39330 chr10 manual_curation exon 5016498 5016629 . - . Parent=GSCOCT00034695001 | |
| 39331 chr10 manual_curation exon 5016078 5016419 . - . Parent=GSCOCT00034695001 | |
| 39332 chr10 manual_curation exon 5015397 5015791 . - . Parent=GSCOCT00034695001 | |
| 39333 chr10 manual_curation exon 5014564 5015167 . - . Parent=GSCOCT00034695001 | |
| 39334 chr10 manual_curation CDS 5020963 5021050 . - 0 Parent=GSCOCT00034695001 | |
| 39335 chr10 manual_curation CDS 5020247 5020379 . - 1 Parent=GSCOCT00034695001 | |
| 39336 chr10 manual_curation CDS 5020058 5020129 . - 2 Parent=GSCOCT00034695001 | |
| 39337 chr10 manual_curation CDS 5017679 5017822 . - 2 Parent=GSCOCT00034695001 | |
| 39338 chr10 manual_curation CDS 5017392 5017463 . - 2 Parent=GSCOCT00034695001 | |
| 39339 chr10 manual_curation CDS 5017184 5017255 . - 2 Parent=GSCOCT00034695001 | |
| 39340 chr10 manual_curation CDS 5016987 5017099 . - 2 Parent=GSCOCT00034695001 | |
| 39341 chr10 manual_curation CDS 5016498 5016629 . - 1 Parent=GSCOCT00034695001 | |
| 39342 chr10 manual_curation CDS 5016078 5016419 . - 1 Parent=GSCOCT00034695001 | |
| 39343 chr10 manual_curation CDS 5015397 5015791 . - 1 Parent=GSCOCT00034695001 | |
| 39344 chr10 manual_curation CDS 5014853 5015167 . - 0 Parent=GSCOCT00034695001 | |
| 39345 chr10 manual_curation gene 5028902 5029708 . + . ID=GSCOCG00034694001;Name=Cc10_g06170 | |
| 39346 chr10 manual_curation mRNA 5028902 5029708 . + . ID=GSCOCT00034694001;Parent=GSCOCG00034694001;Name=Cc10_g06170 | |
| 39347 chr10 manual_curation polypeptide 5028902 5029486 . + . ID=GSCOCP00034694001;Derives_from=GSCOCT00034694001;Name=Cc10_g06170;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034694001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(4032010..4032300%2C4031716..4031799));owner=coffea | |
| 39348 chr10 manual_curation exon 5029403 5029708 . + . Parent=GSCOCT00034694001 | |
| 39349 chr10 manual_curation exon 5028902 5029192 . + . Parent=GSCOCT00034694001 | |
| 39350 chr10 manual_curation CDS 5029403 5029486 . + 0 Parent=GSCOCT00034694001 | |
| 39351 chr10 manual_curation CDS 5028902 5029192 . + 0 Parent=GSCOCT00034694001 | |
| 39352 chr10 manual_curation gene 5032503 5033117 . - . ID=GSCOCG00034693001;Name=Cc10_g06180 | |
| 39353 chr10 manual_curation mRNA 5032503 5033117 . - . ID=GSCOCT00034693001;Parent=GSCOCG00034693001;Name=Cc10_g06180 | |
| 39354 chr10 manual_curation polypeptide 5032560 5033117 . - . ID=GSCOCP00034693001;Dbxref=GENE3D:G3DSA:3.30.730.10,InterPro:IPR001471,InterPro:IPR016177,PFAM:PF00847,PRINTS:PR00367,PROFILE:PS51032,SMART:SM00380,SUPERFAMILY:SSF54171,SwissProt:Q3E703,SwissProt:Q6J9Q2,SwissProt:Q9M644,TAIR:AT1G12890.1,TAIR:AT5G13910.1,TAIR:AT5G18560.1,TrEMBL:B9IQN2,TrEMBL:B9SMB3,TrEMBL:I1LDA2;Derives_from=GSCOCT00034693001;Name=Cc10_g06180;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,CC_EC_number:missing_EC_number,PRODUCT:DNA binding protein%2C putative,CC_functional_completeness:modules,CC_gene:ERF086,CC_gene:LEP,CC_gene:ERF088;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034693001~ DNA binding protein%2C putative~ ERF086~ modules;original_location=4028085..4028642;owner=coffea | |
| 39355 chr10 manual_curation exon 5032503 5033117 . - . Parent=GSCOCT00034693001 | |
| 39356 chr10 manual_curation CDS 5032560 5033117 . - 0 Parent=GSCOCT00034693001 | |
| 39357 chr10 manual_curation gene 5034284 5048587 . - . ID=GSCOCG00034692001;Name=Cc10_g06190 | |
| 39358 chr10 manual_curation mRNA 5034284 5048587 . - . ID=GSCOCT00034692001;Parent=GSCOCG00034692001;Name=Cc10_g06190 | |
| 39359 chr10 manual_curation polypeptide 5034566 5048460 . - . ID=GSCOCP00034692001;Dbxref=InterPro:IPR010326,PANTHER:PTHR21292,PFAM:PF06046,SwissProt:Q19262,SwissProt:Q54BP6,SwissProt:Q62825,TAIR:AT1G71820.2,TrEMBL:B9IQN3,TrEMBL:D7SZT2,TrEMBL:D7TY76;Derives_from=GSCOCT00034692001;Name=Cc10_g06190;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Exocyst complex component 3,CC_functional_completeness:complete,CC_gene:exoc3,CC_gene:sec-6,CC_gene:Exoc3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034692001~ Putative Exocyst complex component 3~ exoc3~ complete;original_location=join(4012742..4012870%2C4014587..4014625%2C4014780..4014868%2C4015014..4015104%2C4015283..4015372%2C4015475..4015554%2C4016237..4016329%2C4017321..4017347%2C4017550..4017657%2C4017817..4017955%2C4018099..4018134%2C4018533..4018588%2C4019209..4019317%2C4020496..4020636%2C4020740..4020919%2C4021728..4021811%2C4021908..4021994%2C4023303..4023347%2C4023850..4023928%2C4024984..4025053%2C4025216..4025303%2C4025419..4025508%2C4025865..4025981%2C4026102..4026164%2C4026505..4026636);owner=coffea | |
| 39360 chr10 manual_curation exon 5048332 5048587 . - . Parent=GSCOCT00034692001 | |
| 39361 chr10 manual_curation exon 5046577 5046615 . - . Parent=GSCOCT00034692001 | |
| 39362 chr10 manual_curation exon 5046334 5046422 . - . Parent=GSCOCT00034692001 | |
| 39363 chr10 manual_curation exon 5046098 5046188 . - . Parent=GSCOCT00034692001 | |
| 39364 chr10 manual_curation exon 5045830 5045919 . - . Parent=GSCOCT00034692001 | |
| 39365 chr10 manual_curation exon 5045648 5045727 . - . Parent=GSCOCT00034692001 | |
| 39366 chr10 manual_curation exon 5044873 5044965 . - . Parent=GSCOCT00034692001 | |
| 39367 chr10 manual_curation exon 5043855 5043881 . - . Parent=GSCOCT00034692001 | |
| 39368 chr10 manual_curation exon 5043545 5043652 . - . Parent=GSCOCT00034692001 | |
| 39369 chr10 manual_curation exon 5043247 5043385 . - . Parent=GSCOCT00034692001 | |
| 39370 chr10 manual_curation exon 5043068 5043103 . - . Parent=GSCOCT00034692001 | |
| 39371 chr10 manual_curation exon 5042614 5042669 . - . Parent=GSCOCT00034692001 | |
| 39372 chr10 manual_curation exon 5041885 5041993 . - . Parent=GSCOCT00034692001 | |
| 39373 chr10 manual_curation exon 5040566 5040706 . - . Parent=GSCOCT00034692001 | |
| 39374 chr10 manual_curation exon 5040283 5040462 . - . Parent=GSCOCT00034692001 | |
| 39375 chr10 manual_curation exon 5039391 5039474 . - . Parent=GSCOCT00034692001 | |
| 39376 chr10 manual_curation exon 5039208 5039294 . - . Parent=GSCOCT00034692001 | |
| 39377 chr10 manual_curation exon 5037855 5037899 . - . Parent=GSCOCT00034692001 | |
| 39378 chr10 manual_curation exon 5037274 5037352 . - . Parent=GSCOCT00034692001 | |
| 39379 chr10 manual_curation exon 5036149 5036218 . - . Parent=GSCOCT00034692001 | |
| 39380 chr10 manual_curation exon 5035899 5035986 . - . Parent=GSCOCT00034692001 | |
| 39381 chr10 manual_curation exon 5035694 5035783 . - . Parent=GSCOCT00034692001 | |
| 39382 chr10 manual_curation exon 5035221 5035337 . - . Parent=GSCOCT00034692001 | |
| 39383 chr10 manual_curation exon 5035038 5035100 . - . Parent=GSCOCT00034692001 | |
| 39384 chr10 manual_curation exon 5034284 5034697 . - . Parent=GSCOCT00034692001 | |
| 39385 chr10 manual_curation CDS 5048332 5048460 . - 0 Parent=GSCOCT00034692001 | |
| 39386 chr10 manual_curation CDS 5046577 5046615 . - 0 Parent=GSCOCT00034692001 | |
| 39387 chr10 manual_curation CDS 5046334 5046422 . - 0 Parent=GSCOCT00034692001 | |
| 39388 chr10 manual_curation CDS 5046098 5046188 . - 2 Parent=GSCOCT00034692001 | |
| 39389 chr10 manual_curation CDS 5045830 5045919 . - 0 Parent=GSCOCT00034692001 | |
| 39390 chr10 manual_curation CDS 5045648 5045727 . - 0 Parent=GSCOCT00034692001 | |
| 39391 chr10 manual_curation CDS 5044873 5044965 . - 2 Parent=GSCOCT00034692001 | |
| 39392 chr10 manual_curation CDS 5043855 5043881 . - 2 Parent=GSCOCT00034692001 | |
| 39393 chr10 manual_curation CDS 5043545 5043652 . - 2 Parent=GSCOCT00034692001 | |
| 39394 chr10 manual_curation CDS 5043247 5043385 . - 2 Parent=GSCOCT00034692001 | |
| 39395 chr10 manual_curation CDS 5043068 5043103 . - 0 Parent=GSCOCT00034692001 | |
| 39396 chr10 manual_curation CDS 5042614 5042669 . - 0 Parent=GSCOCT00034692001 | |
| 39397 chr10 manual_curation CDS 5041885 5041993 . - 2 Parent=GSCOCT00034692001 | |
| 39398 chr10 manual_curation CDS 5040566 5040706 . - 0 Parent=GSCOCT00034692001 | |
| 39399 chr10 manual_curation CDS 5040283 5040462 . - 0 Parent=GSCOCT00034692001 | |
| 39400 chr10 manual_curation CDS 5039391 5039474 . - 0 Parent=GSCOCT00034692001 | |
| 39401 chr10 manual_curation CDS 5039208 5039294 . - 0 Parent=GSCOCT00034692001 | |
| 39402 chr10 manual_curation CDS 5037855 5037899 . - 0 Parent=GSCOCT00034692001 | |
| 39403 chr10 manual_curation CDS 5037274 5037352 . - 0 Parent=GSCOCT00034692001 | |
| 39404 chr10 manual_curation CDS 5036149 5036218 . - 1 Parent=GSCOCT00034692001 | |
| 39405 chr10 manual_curation CDS 5035899 5035986 . - 2 Parent=GSCOCT00034692001 | |
| 39406 chr10 manual_curation CDS 5035694 5035783 . - 0 Parent=GSCOCT00034692001 | |
| 39407 chr10 manual_curation CDS 5035221 5035337 . - 0 Parent=GSCOCT00034692001 | |
| 39408 chr10 manual_curation CDS 5035038 5035100 . - 0 Parent=GSCOCT00034692001 | |
| 39409 chr10 manual_curation CDS 5034566 5034697 . - 0 Parent=GSCOCT00034692001 | |
| 39410 chr10 manual_curation gene 5051336 5054006 . + . ID=GSCOCG00034691001;Name=Cc10_g06200 | |
| 39411 chr10 manual_curation mRNA 5051336 5054006 . + . ID=GSCOCT00034691001;Parent=GSCOCG00034691001;Name=Cc10_g06200 | |
| 39412 chr10 manual_curation polypeptide 5051336 5054006 . + . ID=GSCOCP00034691001;Dbxref=GENE3D:G3DSA:2.60.40.420,InterPro:IPR001117,InterPro:IPR002355,InterPro:IPR008972,InterPro:IPR011706,InterPro:IPR011707,InterPro:IPR017761,PFAM:PF00394,PFAM:PF07731,PFAM:PF07732,PROSITE:PS00079,PROSITE:PS00080,SUPERFAMILY:SSF49503,SwissProt:Q2QZ80,SwissProt:Q84J37,SwissProt:Q9FY79,TAIR:AT2G40370.1,TAIR:AT5G09360.1,TAIR:AT5G48100.1,TIGRFAMs:TIGR03389,TrEMBL:B2M153,TrEMBL:F6HJA9,TrEMBL:F6HWA2;Derives_from=GSCOCT00034691001;Name=Cc10_g06200;Ontology_term=CC_evidence_code:ISS,GO:0005507,GO:0008471,GO:0016491,GO:0046274,GO:0048046,GO:0055114,CC_EC_number:1.10.3.3,PRODUCT:Laccase-15,CC_functional_completeness:complete,CC_gene:TT10,CC_gene:LAC14,CC_gene:LAC21;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034691001~ Laccase-15~ TT10~ complete;original_location=complement(join(4009765..4009866%2C4009466..4009617%2C4009101..4009345%2C4008834..4008962%2C4007505..4008461%2C4007196..4007326));owner=coffea | |
| 39413 chr10 manual_curation exon 5053876 5054006 . + . Parent=GSCOCT00034691001 | |
| 39414 chr10 manual_curation exon 5052741 5053697 . + . Parent=GSCOCT00034691001 | |
| 39415 chr10 manual_curation exon 5052240 5052368 . + . Parent=GSCOCT00034691001 | |
| 39416 chr10 manual_curation exon 5051857 5052101 . + . Parent=GSCOCT00034691001 | |
| 39417 chr10 manual_curation exon 5051585 5051736 . + . Parent=GSCOCT00034691001 | |
| 39418 chr10 manual_curation exon 5051336 5051437 . + . Parent=GSCOCT00034691001 | |
| 39419 chr10 manual_curation CDS 5053876 5054006 . + 1 Parent=GSCOCT00034691001 | |
| 39420 chr10 manual_curation CDS 5052741 5053697 . + 1 Parent=GSCOCT00034691001 | |
| 39421 chr10 manual_curation CDS 5052240 5052368 . + 1 Parent=GSCOCT00034691001 | |
| 39422 chr10 manual_curation CDS 5051857 5052101 . + 2 Parent=GSCOCT00034691001 | |
| 39423 chr10 manual_curation CDS 5051585 5051736 . + 0 Parent=GSCOCT00034691001 | |
| 39424 chr10 manual_curation CDS 5051336 5051437 . + 0 Parent=GSCOCT00034691001 | |
| 39425 chr10 manual_curation gene 5054189 5059572 . + . ID=GSCOCG00034690001;Name=Cc10_g06210 | |
| 39426 chr10 manual_curation mRNA 5054189 5059572 . + . ID=GSCOCT00034690001;Parent=GSCOCG00034690001;Name=Cc10_g06210 | |
| 39427 chr10 manual_curation polypeptide 5054189 5059572 . + . ID=GSCOCP00034690001;Dbxref=GENE3D:G3DSA:2.60.40.420,InterPro:IPR001117,InterPro:IPR008972,InterPro:IPR011706,InterPro:IPR011707,InterPro:IPR017761,PFAM:PF00394,PFAM:PF07731,PFAM:PF07732,SUPERFAMILY:SSF49503,SwissProt:Q6Z8L2,SwissProt:Q84J37,SwissProt:Q9FY79,TAIR:AT2G40370.1,TAIR:AT5G09360.1,TAIR:AT5G48100.1,TIGRFAMs:TIGR03389,TrEMBL:A5BTY9,TrEMBL:B2M153,TrEMBL:F6HWA2;Derives_from=GSCOCT00034690001;Name=Cc10_g06210;Ontology_term=CC_evidence_code:ISS,GO:0005507,GO:0008471,GO:0016491,GO:0046274,GO:0048046,GO:0055114,CC_EC_number:1.10.3.3,PRODUCT:Laccase-15,CC_functional_completeness:complete,CC_gene:TT10,CC_gene:LAC14,CC_gene:LAC9;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034690001~ Laccase-15~ TT10~ complete;original_location=complement(join(4006975..4007013%2C4004677..4004828%2C4003476..4003723%2C4003248..4003373%2C4001630..4002654));owner=coffea | |
| 39428 chr10 manual_curation exon 5058548 5059572 . + . Parent=GSCOCT00034690001 | |
| 39429 chr10 manual_curation exon 5057829 5057954 . + . Parent=GSCOCT00034690001 | |
| 39430 chr10 manual_curation exon 5057479 5057726 . + . Parent=GSCOCT00034690001 | |
| 39431 chr10 manual_curation exon 5056374 5056525 . + . Parent=GSCOCT00034690001 | |
| 39432 chr10 manual_curation exon 5054189 5054227 . + . Parent=GSCOCT00034690001 | |
| 39433 chr10 manual_curation CDS 5058548 5059572 . + 1 Parent=GSCOCT00034690001 | |
| 39434 chr10 manual_curation CDS 5057829 5057954 . + 1 Parent=GSCOCT00034690001 | |
| 39435 chr10 manual_curation CDS 5057479 5057726 . + 2 Parent=GSCOCT00034690001 | |
| 39436 chr10 manual_curation CDS 5056374 5056525 . + 0 Parent=GSCOCT00034690001 | |
| 39437 chr10 manual_curation CDS 5054189 5054227 . + 0 Parent=GSCOCT00034690001 | |
| 39438 chr10 manual_curation gene 5063440 5068733 . + . ID=GSCOCG00034689001;Name=Cc10_g06220 | |
| 39439 chr10 manual_curation mRNA 5063440 5068733 . + . ID=GSCOCT00034689001;Parent=GSCOCG00034689001;Name=Cc10_g06220 | |
| 39440 chr10 manual_curation polypeptide 5063555 5068294 . + . ID=GSCOCP00034689001;Dbxref=GENE3D:G3DSA:3.40.640.10,GENE3D:G3DSA:3.90.1150.10,InterPro:IPR004839,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,InterPro:IPR019942,PFAM:PF00155,SUPERFAMILY:SSF53383,SwissProt:Q10MQ2,SwissProt:Q93ZN9,SwissProt:Q9ZQI7,TAIR:AT2G13810.1,TAIR:AT2G22250.2,TAIR:AT4G33680.1,TIGRFAMs:TIGR03542,TrEMBL:A9PAK9,TrEMBL:F6HBK3,TrEMBL:F6HBK5;Derives_from=GSCOCT00034689001;Name=Cc10_g06220;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0009058,GO:0030170,CC_EC_number:2.6.1.1,PRODUCT:LL-diaminopimelate aminotransferase%2C chloroplastic,CC_functional_completeness:complete,CC_gene:DAP,CC_gene:AGD2,CC_gene:ALD1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034689001~ LL-diaminopimelate aminotransferase%2C chloroplastic~ DAP~ complete;original_location=complement(join(3997559..3997647%2C3997324..3997406%2C3996482..3996549%2C3995913..3996029%2C3995277..3995339%2C3994810..3994914%2C3994638..3994688%2C3993700..3994020%2C3993419..3993625%2C3992908..3993201));owner=coffea | |
| 39441 chr10 manual_curation exon 5068001 5068733 . + . Parent=GSCOCT00034689001 | |
| 39442 chr10 manual_curation exon 5067577 5067783 . + . Parent=GSCOCT00034689001 | |
| 39443 chr10 manual_curation exon 5067182 5067502 . + . Parent=GSCOCT00034689001 | |
| 39444 chr10 manual_curation exon 5066514 5066564 . + . Parent=GSCOCT00034689001 | |
| 39445 chr10 manual_curation exon 5066288 5066392 . + . Parent=GSCOCT00034689001 | |
| 39446 chr10 manual_curation exon 5065863 5065925 . + . Parent=GSCOCT00034689001 | |
| 39447 chr10 manual_curation exon 5065173 5065289 . + . Parent=GSCOCT00034689001 | |
| 39448 chr10 manual_curation exon 5064653 5064720 . + . Parent=GSCOCT00034689001 | |
| 39449 chr10 manual_curation exon 5063796 5063878 . + . Parent=GSCOCT00034689001 | |
| 39450 chr10 manual_curation exon 5063440 5063643 . + . Parent=GSCOCT00034689001 | |
| 39451 chr10 manual_curation CDS 5068001 5068294 . + 0 Parent=GSCOCT00034689001 | |
| 39452 chr10 manual_curation CDS 5067577 5067783 . + 0 Parent=GSCOCT00034689001 | |
| 39453 chr10 manual_curation CDS 5067182 5067502 . + 0 Parent=GSCOCT00034689001 | |
| 39454 chr10 manual_curation CDS 5066514 5066564 . + 0 Parent=GSCOCT00034689001 | |
| 39455 chr10 manual_curation CDS 5066288 5066392 . + 0 Parent=GSCOCT00034689001 | |
| 39456 chr10 manual_curation CDS 5065863 5065925 . + 0 Parent=GSCOCT00034689001 | |
| 39457 chr10 manual_curation CDS 5065173 5065289 . + 0 Parent=GSCOCT00034689001 | |
| 39458 chr10 manual_curation CDS 5064653 5064720 . + 1 Parent=GSCOCT00034689001 | |
| 39459 chr10 manual_curation CDS 5063796 5063878 . + 2 Parent=GSCOCT00034689001 | |
| 39460 chr10 manual_curation CDS 5063555 5063643 . + 0 Parent=GSCOCT00034689001 | |
| 39461 chr10 manual_curation gene 5073331 5077199 . + . ID=GSCOCG00034687001;Name=Cc10_g06230 | |
| 39462 chr10 manual_curation mRNA 5073331 5077199 . + . ID=GSCOCT00034687001;Parent=GSCOCG00034687001;Name=Cc10_g06230 | |
| 39463 chr10 manual_curation polypeptide 5073412 5076855 . + . ID=GSCOCP00034687001;Dbxref=GENE3D:G3DSA:2.60.40.420,InterPro:IPR001117,InterPro:IPR002355,InterPro:IPR008972,InterPro:IPR011706,InterPro:IPR011707,InterPro:IPR017761,PFAM:PF00394,PFAM:PF07731,PFAM:PF07732,PROSITE:PS00079,PROSITE:PS00080,SUPERFAMILY:SSF49503,SwissProt:Q6Z8L2,SwissProt:Q84J37,SwissProt:Q9FY79,TAIR:AT5G05390.1,TAIR:AT5G09360.1,TAIR:AT5G48100.1,TIGRFAMs:TIGR03389,TrEMBL:B2M153,TrEMBL:F6HJA9,TrEMBL:F6HWA2;Derives_from=GSCOCT00034687001;Name=Cc10_g06230;Ontology_term=CC_evidence_code:ISS,GO:0005507,GO:0008471,GO:0016491,GO:0046274,GO:0048046,GO:0055114,CC_EC_number:1.10.3.3,PRODUCT:Laccase-14,CC_functional_completeness:complete,CC_gene:LAC14,CC_gene:TT10,CC_gene:LAC9;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034687001~ Laccase-14~ LAC14~ complete;original_location=complement(join(3987698..3987790%2C3987096..3987247%2C3986751..3986995%2C3986491..3986619%2C3984909..3985835%2C3984347..3984477));owner=coffea | |
| 39464 chr10 manual_curation exon 5076725 5077199 . + . Parent=GSCOCT00034687001 | |
| 39465 chr10 manual_curation exon 5075367 5076293 . + . Parent=GSCOCT00034687001 | |
| 39466 chr10 manual_curation exon 5074583 5074711 . + . Parent=GSCOCT00034687001 | |
| 39467 chr10 manual_curation exon 5074207 5074451 . + . Parent=GSCOCT00034687001 | |
| 39468 chr10 manual_curation exon 5073955 5074106 . + . Parent=GSCOCT00034687001 | |
| 39469 chr10 manual_curation exon 5073331 5073504 . + . Parent=GSCOCT00034687001 | |
| 39470 chr10 manual_curation CDS 5076725 5076855 . + 1 Parent=GSCOCT00034687001 | |
| 39471 chr10 manual_curation CDS 5075367 5076293 . + 1 Parent=GSCOCT00034687001 | |
| 39472 chr10 manual_curation CDS 5074583 5074711 . + 1 Parent=GSCOCT00034687001 | |
| 39473 chr10 manual_curation CDS 5074207 5074451 . + 2 Parent=GSCOCT00034687001 | |
| 39474 chr10 manual_curation CDS 5073955 5074106 . + 0 Parent=GSCOCT00034687001 | |
| 39475 chr10 manual_curation CDS 5073412 5073504 . + 0 Parent=GSCOCT00034687001 | |
| 39476 chr10 manual_curation gene 5079232 5082428 . + . ID=GSCOCG00034686001;Name=Cc10_g06240 | |
| 39477 chr10 manual_curation mRNA 5079232 5082428 . + . ID=GSCOCT00034686001;Parent=GSCOCG00034686001;Name=Cc10_g06240 | |
| 39478 chr10 manual_curation polypeptide 5079232 5082428 . + . ID=GSCOCP00034686001;Dbxref=GENE3D:G3DSA:2.60.40.420,InterPro:IPR001117,InterPro:IPR002355,InterPro:IPR008972,InterPro:IPR011706,InterPro:IPR011707,InterPro:IPR017761,PFAM:PF00394,PFAM:PF07731,PFAM:PF07732,PROSITE:PS00079,PROSITE:PS00080,SUPERFAMILY:SSF49503,SwissProt:Q6Z8L2,SwissProt:Q84J37,SwissProt:Q9FY79,TAIR:AT5G05390.1,TAIR:AT5G09360.1,TAIR:AT5G48100.1,TIGRFAMs:TIGR03389,TrEMBL:B2M153,TrEMBL:F6HRW3,TrEMBL:F6HWA2;Derives_from=GSCOCT00034686001;Name=Cc10_g06240;Ontology_term=CC_evidence_code:ISS,GO:0005507,GO:0008471,GO:0016491,GO:0046274,GO:0048046,GO:0055114,CC_EC_number:1.10.3.3,PRODUCT:Laccase-14,CC_functional_completeness:complete,CC_gene:LAC14,CC_gene:TT10,CC_gene:LAC9;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034686001~ Laccase-14~ LAC14~ complete;original_location=complement(join(3981890..3981970%2C3981325..3981476%2C3980964..3981208%2C3980697..3980825%2C3979260..3980198%2C3978774..3978904));owner=coffea | |
| 39479 chr10 manual_curation exon 5082298 5082428 . + . Parent=GSCOCT00034686001 | |
| 39480 chr10 manual_curation exon 5081004 5081942 . + . Parent=GSCOCT00034686001 | |
| 39481 chr10 manual_curation exon 5080377 5080505 . + . Parent=GSCOCT00034686001 | |
| 39482 chr10 manual_curation exon 5079994 5080238 . + . Parent=GSCOCT00034686001 | |
| 39483 chr10 manual_curation exon 5079726 5079877 . + . Parent=GSCOCT00034686001 | |
| 39484 chr10 manual_curation exon 5079232 5079312 . + . Parent=GSCOCT00034686001 | |
| 39485 chr10 manual_curation CDS 5082298 5082428 . + 1 Parent=GSCOCT00034686001 | |
| 39486 chr10 manual_curation CDS 5081004 5081942 . + 1 Parent=GSCOCT00034686001 | |
| 39487 chr10 manual_curation CDS 5080377 5080505 . + 1 Parent=GSCOCT00034686001 | |
| 39488 chr10 manual_curation CDS 5079994 5080238 . + 2 Parent=GSCOCT00034686001 | |
| 39489 chr10 manual_curation CDS 5079726 5079877 . + 0 Parent=GSCOCT00034686001 | |
| 39490 chr10 manual_curation CDS 5079232 5079312 . + 0 Parent=GSCOCT00034686001 | |
| 39491 chr10 manual_curation gene 5087644 5089522 . + . ID=GSCOCG00034685001;Name=Cc10_g06250 | |
| 39492 chr10 manual_curation mRNA 5087644 5089522 . + . ID=GSCOCT00034685001;Parent=GSCOCG00034685001;Name=Cc10_g06250 | |
| 39493 chr10 manual_curation polypeptide 5087644 5089522 . + . ID=GSCOCP00034685001;Dbxref=GENE3D:G3DSA:2.60.40.420,InterPro:IPR001117,InterPro:IPR008972,InterPro:IPR011707,PFAM:PF00394,PFAM:PF07732,SUPERFAMILY:SSF49503,SwissProt:Q84J37,SwissProt:Q941X2,SwissProt:Q9FY79,TAIR:AT5G07130.1,TAIR:AT5G09360.1,TAIR:AT5G48100.1,TrEMBL:A5BTY9,TrEMBL:F6HJB1,TrEMBL:F6HWA2;Derives_from=GSCOCT00034685001;Name=Cc10_g06250;Ontology_term=CC_evidence_code:ISS,GO:0005507,GO:0016491,GO:0055114,CC_EC_number:1.10.3.3,PRODUCT:Putative Laccase-14,CC_functional_completeness:fragment,CC_gene:LAC14,CC_gene:TT10,CC_gene:LAC3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034685001~ Putative Laccase-14~ LAC14~ fragment;original_location=complement(join(3973340..3973558%2C3973040..3973184%2C3972797..3972925%2C3972044..3972293%2C3971680..3971899));owner=coffea | |
| 39494 chr10 manual_curation exon 5089303 5089522 . + . Parent=GSCOCT00034685001 | |
| 39495 chr10 manual_curation exon 5088909 5089158 . + . Parent=GSCOCT00034685001 | |
| 39496 chr10 manual_curation exon 5088277 5088405 . + . Parent=GSCOCT00034685001 | |
| 39497 chr10 manual_curation exon 5088018 5088162 . + . Parent=GSCOCT00034685001 | |
| 39498 chr10 manual_curation exon 5087644 5087862 . + . Parent=GSCOCT00034685001 | |
| 39499 chr10 manual_curation CDS 5089303 5089522 . + 2 Parent=GSCOCT00034685001 | |
| 39500 chr10 manual_curation CDS 5088909 5089158 . + 1 Parent=GSCOCT00034685001 | |
| 39501 chr10 manual_curation CDS 5088277 5088405 . + 1 Parent=GSCOCT00034685001 | |
| 39502 chr10 manual_curation CDS 5088018 5088162 . + 0 Parent=GSCOCT00034685001 | |
| 39503 chr10 manual_curation CDS 5087644 5087862 . + 0 Parent=GSCOCT00034685001 | |
| 39504 chr10 manual_curation gene 5111684 5113749 . - . ID=GSCOCG00034683001;Name=Cc10_g06260 | |
| 39505 chr10 manual_curation mRNA 5111684 5113749 . - . ID=GSCOCT00034683001;Parent=GSCOCG00034683001;Name=Cc10_g06260 | |
| 39506 chr10 manual_curation polypeptide 5111684 5113749 . - . ID=GSCOCP00034683001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:O65012,SwissProt:P48420,SwissProt:Q7Y1V5,TAIR:AT2G46660.1,TAIR:AT3G61880.2,TAIR:AT5G09970.1,TrEMBL:B9GT45,TrEMBL:F6H4A6,TrEMBL:F6HWA0;Derives_from=GSCOCT00034683001;Name=Cc10_g06260;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.21,PRODUCT:Cytochrome P450 78A4,CC_functional_completeness:complete,CC_gene:CYP78A4,CC_gene:CYP78A11,CC_gene:CYP78A1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034683001~ Cytochrome P450 78A4~ CYP78A4~ complete;original_location=join(3947453..3948442%2C3948886..3949518);owner=coffea | |
| 39507 chr10 manual_curation exon 5112760 5113749 . - . Parent=GSCOCT00034683001 | |
| 39508 chr10 manual_curation exon 5111684 5112316 . - . Parent=GSCOCT00034683001 | |
| 39509 chr10 manual_curation CDS 5112760 5113749 . - 0 Parent=GSCOCT00034683001 | |
| 39510 chr10 manual_curation CDS 5111684 5112316 . - 0 Parent=GSCOCT00034683001 | |
| 39511 chr10 manual_curation gene 5121133 5123260 . - . ID=GSCOCG00034682001;Name=Cc10_g06270 | |
| 39512 chr10 manual_curation mRNA 5121133 5123260 . - . ID=GSCOCT00034682001;Parent=GSCOCG00034682001;Name=Cc10_g06270 | |
| 39513 chr10 manual_curation polypeptide 5121317 5123170 . - . ID=GSCOCP00034682001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR000683,InterPro:IPR016040,PFAM:PF01408,SwissProt:P49305,SwissProt:Q642M9,SwissProt:Q9SZ83,TAIR:AT1G34200.1,TAIR:AT1G66130.1,TAIR:AT4G09670.1,TrEMBL:A5ASV7,TrEMBL:B7FI94,TrEMBL:F6HJB9;Derives_from=GSCOCT00034682001;Name=Cc10_g06270;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,GO:0016491,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterized oxidoreductase At4g09670,CC_functional_completeness:complete,CC_gene:At4g09670,CC_gene:dhdh;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034682001~ Uncharacterized oxidoreductase At4g09670~ At4g09670~ complete;original_location=join(3938032..3938493%2C3939265..3939885);owner=coffea | |
| 39514 chr10 manual_curation exon 5122709 5123260 . - . Parent=GSCOCT00034682001 | |
| 39515 chr10 manual_curation exon 5121133 5121937 . - . Parent=GSCOCT00034682001 | |
| 39516 chr10 manual_curation CDS 5122709 5123170 . - 0 Parent=GSCOCT00034682001 | |
| 39517 chr10 manual_curation CDS 5121317 5121937 . - 0 Parent=GSCOCT00034682001 | |
| 39518 chr10 manual_curation gene 5128030 5130438 . - . ID=GSCOCG00034681001;Name=Cc10_g06280 | |
| 39519 chr10 manual_curation mRNA 5128030 5130438 . - . ID=GSCOCT00034681001;Parent=GSCOCG00034681001;Name=Cc10_g06280 | |
| 39520 chr10 manual_curation polypeptide 5128315 5129835 . - . ID=GSCOCP00034681001;Dbxref=InterPro:IPR004104,PFAM:PF02894,SwissProt:Q9SZ83,TAIR:AT1G34200.1,TAIR:AT1G66130.1,TAIR:AT4G09670.1,TrEMBL:B9H7Z4,TrEMBL:F6HJB9,TrEMBL:I1JD96;Derives_from=GSCOCT00034681001;Name=Cc10_g06280;Ontology_term=CC_evidence_code:ISS,GO:0008152,GO:0016491,GO:0055114,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterized oxidoreductase At4g09670,CC_functional_completeness:fragment,CC_gene:At4g09670;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034681001~ Uncharacterized oxidoreductase At4g09670~ At4g09670~ fragment;original_location=join(3931367..3931438%2C3932267..3932887);owner=coffea | |
| 39521 chr10 manual_curation exon 5129764 5130438 . - . Parent=GSCOCT00034681001 | |
| 39522 chr10 manual_curation exon 5128030 5128935 . - . Parent=GSCOCT00034681001 | |
| 39523 chr10 manual_curation CDS 5129764 5129835 . - 0 Parent=GSCOCT00034681001 | |
| 39524 chr10 manual_curation CDS 5128315 5128935 . - 0 Parent=GSCOCT00034681001 | |
| 39525 chr10 manual_curation gene 5130974 5133688 . - . ID=GSCOCG00034680001;Name=Cc10_g06290 | |
| 39526 chr10 manual_curation mRNA 5130974 5133688 . - . ID=GSCOCT00034680001;Parent=GSCOCG00034680001;Name=Cc10_g06290 | |
| 39527 chr10 manual_curation polypeptide 5131302 5133538 . - . ID=GSCOCP00034680001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR000683,InterPro:IPR016040,PFAM:PF01408,SwissProt:P49305,SwissProt:Q642M9,SwissProt:Q9SZ83,TAIR:AT1G34200.1,TAIR:AT1G66130.1,TAIR:AT4G09670.1,TrEMBL:A5ASV7,TrEMBL:F6HJB9,TrEMBL:F6HJC1;Derives_from=GSCOCT00034680001;Name=Cc10_g06290;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,GO:0016491,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterized oxidoreductase At4g09670,CC_functional_completeness:complete,CC_gene:At4g09670,CC_gene:dhdh;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034680001~ Uncharacterized oxidoreductase At4g09670~ At4g09670~ complete;original_location=join(3927664..3928128%2C3929280..3929900);owner=coffea | |
| 39528 chr10 manual_curation exon 5133074 5133688 . - . Parent=GSCOCT00034680001 | |
| 39529 chr10 manual_curation exon 5130974 5131922 . - . Parent=GSCOCT00034680001 | |
| 39530 chr10 manual_curation CDS 5133074 5133538 . - 0 Parent=GSCOCT00034680001 | |
| 39531 chr10 manual_curation CDS 5131302 5131922 . - 0 Parent=GSCOCT00034680001 | |
| 39532 chr10 manual_curation gene 5135719 5137705 . + . ID=GSCOCG00034679001;Name=Cc10_g06300 | |
| 39533 chr10 manual_curation mRNA 5135719 5137705 . + . ID=GSCOCT00034679001;Parent=GSCOCG00034679001;Name=Cc10_g06300 | |
| 39534 chr10 manual_curation polypeptide 5135719 5137705 . + . ID=GSCOCP00034679001;Dbxref=InterPro:IPR002182,PFAM:PF00931,SwissProt:Q60CZ8,SwissProt:Q6L400,SwissProt:Q6L438,TAIR:AT1G50180.1,TAIR:AT3G46530.1,TAIR:AT3G46730.1,TrEMBL:Q6L432,TrEMBL:Q9LLD0,TrEMBL:Q9LLD4;Derives_from=GSCOCT00034679001;Name=Cc10_g06300;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1B-16,CC_functional_completeness:fragment,CC_gene:R1B-16,CC_gene:R1A-6,CC_gene:R1A-10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034679001~ Putative late blight resistance protein homolog R1B-16~ R1B-16~ fragment;original_location=complement(join(3925433..3925483%2C3924520..3925160%2C3924203..3924416%2C3923497..3924069));owner=coffea | |
| 39535 chr10 manual_curation exon 5137133 5137705 . + . Parent=GSCOCT00034679001 | |
| 39536 chr10 manual_curation exon 5136786 5136999 . + . Parent=GSCOCT00034679001 | |
| 39537 chr10 manual_curation exon 5136042 5136682 . + . Parent=GSCOCT00034679001 | |
| 39538 chr10 manual_curation exon 5135719 5135769 . + . Parent=GSCOCT00034679001 | |
| 39539 chr10 manual_curation CDS 5137133 5137705 . + 0 Parent=GSCOCT00034679001 | |
| 39540 chr10 manual_curation CDS 5136786 5136999 . + 2 Parent=GSCOCT00034679001 | |
| 39541 chr10 manual_curation CDS 5136042 5136682 . + 0 Parent=GSCOCT00034679001 | |
| 39542 chr10 manual_curation CDS 5135719 5135769 . + 0 Parent=GSCOCT00034679001 | |
| 39543 chr10 manual_curation gene 5142377 5153681 . + . ID=GSCOCG00034677001;Name=Cc10_g06310 | |
| 39544 chr10 manual_curation mRNA 5142377 5153681 . + . ID=GSCOCT00034677001;Parent=GSCOCG00034677001;Name=Cc10_g06310 | |
| 39545 chr10 manual_curation polypeptide 5142377 5153352 . + . ID=GSCOCP00034677001;Dbxref=InterPro:IPR000719,InterPro:IPR004147,InterPro:IPR011009,PFAM:PF03109,PROFILE:PS50011,SUPERFAMILY:SSF56112,SwissProt:Q55680,SwissProt:Q94BU1,SwissProt:Q9MA15,TAIR:AT1G71810.1,TAIR:AT1G79600.1,TAIR:AT3G24190.1,TrEMBL:B9GT46,TrEMBL:B9SMA1,TrEMBL:F6HJC4;Derives_from=GSCOCT00034677001;Name=Cc10_g06310;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0005524,GO:0006468,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterized aarF domain-containing protein kinase At1g71810%2C chloroplastic,CC_functional_completeness:complete,CC_gene:At1g71810,CC_gene:sll0005,CC_gene:At1g79600;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034677001~ Uncharacterized aarF domain-containing protein kinase At1g71810%2C chloroplastic~ At1g71810~ complete;original_location=complement(join(3918424..3918825%2C3918114..3918158%2C3917975..3918013%2C3915822..3915992%2C3915502..3915654%2C3915153..3915188%2C3914393..3914436%2C3913561..3913651%2C3912742..3912783%2C3912522..3912630%2C3912057..3912171%2C3911916..3911965%2C3911734..3911812%2C3911149..3911199%2C3910795..3910936%2C3910614..3910658%2C3910169..3910270%2C3910031..3910072%2C3909340..3909522%2C3908334..3908441%2C3907850..3907954));owner=coffea | |
| 39546 chr10 manual_curation exon 5153248 5153681 . + . Parent=GSCOCT00034677001 | |
| 39547 chr10 manual_curation exon 5152761 5152868 . + . Parent=GSCOCT00034677001 | |
| 39548 chr10 manual_curation exon 5151680 5151862 . + . Parent=GSCOCT00034677001 | |
| 39549 chr10 manual_curation exon 5151130 5151171 . + . Parent=GSCOCT00034677001 | |
| 39550 chr10 manual_curation exon 5150932 5151033 . + . Parent=GSCOCT00034677001 | |
| 39551 chr10 manual_curation exon 5150544 5150588 . + . Parent=GSCOCT00034677001 | |
| 39552 chr10 manual_curation exon 5150266 5150407 . + . Parent=GSCOCT00034677001 | |
| 39553 chr10 manual_curation exon 5150003 5150053 . + . Parent=GSCOCT00034677001 | |
| 39554 chr10 manual_curation exon 5149390 5149468 . + . Parent=GSCOCT00034677001 | |
| 39555 chr10 manual_curation exon 5149237 5149286 . + . Parent=GSCOCT00034677001 | |
| 39556 chr10 manual_curation exon 5149031 5149145 . + . Parent=GSCOCT00034677001 | |
| 39557 chr10 manual_curation exon 5148572 5148680 . + . Parent=GSCOCT00034677001 | |
| 39558 chr10 manual_curation exon 5148419 5148460 . + . Parent=GSCOCT00034677001 | |
| 39559 chr10 manual_curation exon 5147551 5147641 . + . Parent=GSCOCT00034677001 | |
| 39560 chr10 manual_curation exon 5146766 5146809 . + . Parent=GSCOCT00034677001 | |
| 39561 chr10 manual_curation exon 5146014 5146049 . + . Parent=GSCOCT00034677001 | |
| 39562 chr10 manual_curation exon 5145548 5145700 . + . Parent=GSCOCT00034677001 | |
| 39563 chr10 manual_curation exon 5145210 5145380 . + . Parent=GSCOCT00034677001 | |
| 39564 chr10 manual_curation exon 5143189 5143227 . + . Parent=GSCOCT00034677001 | |
| 39565 chr10 manual_curation exon 5143044 5143088 . + . Parent=GSCOCT00034677001 | |
| 39566 chr10 manual_curation exon 5142377 5142778 . + . Parent=GSCOCT00034677001 | |
| 39567 chr10 manual_curation CDS 5153248 5153352 . + 0 Parent=GSCOCT00034677001 | |
| 39568 chr10 manual_curation CDS 5152761 5152868 . + 0 Parent=GSCOCT00034677001 | |
| 39569 chr10 manual_curation CDS 5151680 5151862 . + 0 Parent=GSCOCT00034677001 | |
| 39570 chr10 manual_curation CDS 5151130 5151171 . + 0 Parent=GSCOCT00034677001 | |
| 39571 chr10 manual_curation CDS 5150932 5151033 . + 0 Parent=GSCOCT00034677001 | |
| 39572 chr10 manual_curation CDS 5150544 5150588 . + 0 Parent=GSCOCT00034677001 | |
| 39573 chr10 manual_curation CDS 5150266 5150407 . + 2 Parent=GSCOCT00034677001 | |
| 39574 chr10 manual_curation CDS 5150003 5150053 . + 2 Parent=GSCOCT00034677001 | |
| 39575 chr10 manual_curation CDS 5149390 5149468 . + 1 Parent=GSCOCT00034677001 | |
| 39576 chr10 manual_curation CDS 5149237 5149286 . + 2 Parent=GSCOCT00034677001 | |
| 39577 chr10 manual_curation CDS 5149031 5149145 . + 1 Parent=GSCOCT00034677001 | |
| 39578 chr10 manual_curation CDS 5148572 5148680 . + 0 Parent=GSCOCT00034677001 | |
| 39579 chr10 manual_curation CDS 5148419 5148460 . + 0 Parent=GSCOCT00034677001 | |
| 39580 chr10 manual_curation CDS 5147551 5147641 . + 2 Parent=GSCOCT00034677001 | |
| 39581 chr10 manual_curation CDS 5146766 5146809 . + 0 Parent=GSCOCT00034677001 | |
| 39582 chr10 manual_curation CDS 5146014 5146049 . + 0 Parent=GSCOCT00034677001 | |
| 39583 chr10 manual_curation CDS 5145548 5145700 . + 0 Parent=GSCOCT00034677001 | |
| 39584 chr10 manual_curation CDS 5145210 5145380 . + 0 Parent=GSCOCT00034677001 | |
| 39585 chr10 manual_curation CDS 5143189 5143227 . + 0 Parent=GSCOCT00034677001 | |
| 39586 chr10 manual_curation CDS 5143044 5143088 . + 0 Parent=GSCOCT00034677001 | |
| 39587 chr10 manual_curation CDS 5142377 5142778 . + 0 Parent=GSCOCT00034677001 | |
| 39588 chr10 manual_curation gene 5156021 5160327 . - . ID=GSCOCG00034676001;Name=Cc10_g06320 | |
| 39589 chr10 manual_curation mRNA 5156021 5160327 . - . ID=GSCOCT00034676001;Parent=GSCOCG00034676001;Name=Cc10_g06320 | |
| 39590 chr10 manual_curation polypeptide 5156807 5159923 . - . ID=GSCOCP00034676001;Dbxref=InterPro:IPR003441,PFAM:PF02365,PROFILE:PS51005,SUPERFAMILY:SSF101941,SwissProt:Q7GCL7,SwissProt:Q84K00,SwissProt:Q93VY3,TAIR:AT1G32870.1,TAIR:AT1G34180.2,TAIR:AT1G34190.1,TrEMBL:B9GT49,TrEMBL:Q8LRL8,TrEMBL:Q8LRL9;Derives_from=GSCOCT00034676001;Name=Cc10_g06320;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative NAC domain containing protein 17,CC_functional_completeness:complete,CC_gene:NAC078,CC_gene:NAC74,CC_gene:NAC072;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034676001~ Putative NAC domain containing protein 17~ NAC078~ complete;original_location=join(3901279..3901471%2C3902528..3903000%2C3903064..3903739%2C3904028..3904395);owner=coffea | |
| 39591 chr10 manual_curation exon 5159731 5160327 . - . Parent=GSCOCT00034676001 | |
| 39592 chr10 manual_curation exon 5158202 5158674 . - . Parent=GSCOCT00034676001 | |
| 39593 chr10 manual_curation exon 5157463 5158138 . - . Parent=GSCOCT00034676001 | |
| 39594 chr10 manual_curation exon 5156021 5157174 . - . Parent=GSCOCT00034676001 | |
| 39595 chr10 manual_curation CDS 5159731 5159923 . - 0 Parent=GSCOCT00034676001 | |
| 39596 chr10 manual_curation CDS 5158202 5158674 . - 1 Parent=GSCOCT00034676001 | |
| 39597 chr10 manual_curation CDS 5157463 5158138 . - 0 Parent=GSCOCT00034676001 | |
| 39598 chr10 manual_curation CDS 5156807 5157174 . - 1 Parent=GSCOCT00034676001 | |
| 39599 chr10 manual_curation gene 5166388 5170581 . + . ID=GSCOCG00034675001;Name=Cc10_g06330 | |
| 39600 chr10 manual_curation mRNA 5166388 5170581 . + . ID=GSCOCT00034675001;Parent=GSCOCG00034675001;Name=Cc10_g06330 | |
| 39601 chr10 manual_curation polypeptide 5166877 5170492 . + . ID=GSCOCP00034675001;Dbxref=InterPro:IPR006694,PFAM:PF04116,SwissProt:O94298,SwissProt:Q8VYI1,SwissProt:Q9AST3,TAIR:AT1G14290.1,TAIR:AT1G69640.1,TAIR:AT2G29390.1,TrEMBL:B9SM94,TrEMBL:D7TFR6,TrEMBL:I1LDA9;Derives_from=GSCOCT00034675001;Name=Cc10_g06330;Ontology_term=CC_evidence_code:ISS,GO:0005506,GO:0005783,GO:0006633,GO:0016491,GO:0055114,CC_EC_number:1.14.13.72,PRODUCT:Sphingoid base hydroxylase 2,CC_functional_completeness:complete,CC_gene:SBH2,CC_gene:SBH1,CC_gene:SPBC887.15c;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034675001~ Sphingoid base hydroxylase 2~ SBH2~ complete;original_location=complement(join(3894095..3894325%2C3890710..3891252));owner=coffea | |
| 39602 chr10 manual_curation exon 5166388 5166642 . + . Parent=GSCOCT00034675001 | |
| 39603 chr10 manual_curation exon 5169950 5170581 . + . Parent=GSCOCT00034675001 | |
| 39604 chr10 manual_curation exon 5166733 5167107 . + . Parent=GSCOCT00034675001 | |
| 39605 chr10 manual_curation CDS 5169950 5170492 . + 0 Parent=GSCOCT00034675001 | |
| 39606 chr10 manual_curation CDS 5166877 5167107 . + 0 Parent=GSCOCT00034675001 | |
| 39607 chr10 manual_curation gene 5172106 5174464 . + . ID=GSCOCG00034673001;Name=Cc10_g06340 | |
| 39608 chr10 manual_curation mRNA 5172106 5174464 . + . ID=GSCOCT00034673001;Parent=GSCOCG00034673001;Name=Cc10_g06340 | |
| 39609 chr10 manual_curation polypeptide 5173287 5174187 . + . ID=GSCOCP00034673001;Dbxref=InterPro:IPR007052,InterPro:IPR008978,InterPro:IPR017447,PFAM:PF04969,PROFILE:PS51203,SUPERFAMILY:SSF49764,SwissProt:P0C8Z0,SwissProt:Q6ID70,SwissProt:Q6YYB0,TAIR:AT3G03773.2,TAIR:AT4G02450.1,TrEMBL:I1MP11,TrEMBL:I1MP12,TrEMBL:Q9FR34;Derives_from=GSCOCT00034673001;Name=Cc10_g06340;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterized protein,CC_functional_completeness:modules,CC_gene:Os08g0359500,CC_gene:OsI_027940,CC_gene:At3g03773;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034673001~ Uncharacterized protein~ Os08g0359500~ modules;original_location=complement(join(3887739..3887915%2C3887493..3887652%2C3887350..3887387%2C3887015..3887269));owner=coffea | |
| 39610 chr10 manual_curation exon 5172106 5172330 . + . Parent=GSCOCT00034673001 | |
| 39611 chr10 manual_curation exon 5173933 5174464 . + . Parent=GSCOCT00034673001 | |
| 39612 chr10 manual_curation exon 5173815 5173852 . + . Parent=GSCOCT00034673001 | |
| 39613 chr10 manual_curation exon 5173550 5173709 . + . Parent=GSCOCT00034673001 | |
| 39614 chr10 manual_curation exon 5173277 5173463 . + . Parent=GSCOCT00034673001 | |
| 39615 chr10 manual_curation CDS 5173933 5174187 . + 0 Parent=GSCOCT00034673001 | |
| 39616 chr10 manual_curation CDS 5173815 5173852 . + 1 Parent=GSCOCT00034673001 | |
| 39617 chr10 manual_curation CDS 5173550 5173709 . + 0 Parent=GSCOCT00034673001 | |
| 39618 chr10 manual_curation CDS 5173287 5173463 . + 0 Parent=GSCOCT00034673001 | |
| 39619 chr10 manual_curation gene 5174804 5177084 . - . ID=GSCOCG00034672001;Name=Cc10_g06350 | |
| 39620 chr10 manual_curation mRNA 5174804 5177084 . - . ID=GSCOCT00034672001;Parent=GSCOCG00034672001;Name=Cc10_g06350 | |
| 39621 chr10 manual_curation polypeptide 5175257 5176981 . - . ID=GSCOCP00034672001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:A8MQA3,SwissProt:Q8LK93,SwissProt:Q9FX24,TAIR:AT1G34160.1,TAIR:AT2G02980.1,TAIR:AT4G21065.1,TIGRFAMs:TIGR00756,TrEMBL:B9H7Z0,TrEMBL:F6HJC8,TrEMBL:I1LNY3;Derives_from=GSCOCT00034672001;Name=Cc10_g06350;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At1g34160,CC_functional_completeness:complete,CC_gene:PCMP-H68,CC_gene:PCMP-H28,CC_gene:PCMP-H26;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034672001~ Pentatricopeptide repeat-containing protein At1g34160~ PCMP-H68~ complete;original_location=3884221..3885945;owner=coffea | |
| 39622 chr10 manual_curation exon 5174804 5177084 . - . Parent=GSCOCT00034672001 | |
| 39623 chr10 manual_curation CDS 5175257 5176981 . - 0 Parent=GSCOCT00034672001 | |
| 39624 chr10 manual_curation gene 5177357 5180822 . - . ID=GSCOCG00034671001;Name=Cc10_g06360 | |
| 39625 chr10 manual_curation mRNA 5177357 5180822 . - . ID=GSCOCT00034671001;Parent=GSCOCG00034671001;Name=Cc10_g06360 | |
| 39626 chr10 manual_curation polypeptide 5177785 5180712 . - . ID=GSCOCP00034671001;Dbxref=InterPro:IPR001698,InterPro:IPR019771,PANTHER:PTHR10619,PFAM:PF01115,PRINTS:PR00192,PROSITE:PS00231,SwissProt:P14315,SwissProt:P48603,SwissProt:Q9M9G7,TAIR:AT1G71790.1,TrEMBL:A5BMP3,TrEMBL:D7TFR9,TrEMBL:I1LDB1;Derives_from=GSCOCT00034671001;Name=Cc10_g06360;Ontology_term=CC_evidence_code:ISS,GO:0003779,GO:0005737,GO:0008290,GO:0030036,CC_EC_number:missing_EC_number,PRODUCT:Probable F-actin-capping protein subunit beta,CC_functional_completeness:complete,CC_gene:At1g71790,CC_gene:cpb,CC_gene:CAPZB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034671001~ Probable F-actin-capping protein subunit beta~ At1g71790~ complete;original_location=join(3880490..3880618%2C3881429..3881499%2C3881921..3882034%2C3882282..3882364%2C3882440..3882513%2C3882630..3882749%2C3883055..3883150%2C3883334..3883417);owner=coffea | |
| 39627 chr10 manual_curation exon 5180584 5180822 . - . Parent=GSCOCT00034671001 | |
| 39628 chr10 manual_curation exon 5179703 5179773 . - . Parent=GSCOCT00034671001 | |
| 39629 chr10 manual_curation exon 5179168 5179281 . - . Parent=GSCOCT00034671001 | |
| 39630 chr10 manual_curation exon 5178838 5178920 . - . Parent=GSCOCT00034671001 | |
| 39631 chr10 manual_curation exon 5178689 5178762 . - . Parent=GSCOCT00034671001 | |
| 39632 chr10 manual_curation exon 5178453 5178572 . - . Parent=GSCOCT00034671001 | |
| 39633 chr10 manual_curation exon 5178052 5178147 . - . Parent=GSCOCT00034671001 | |
| 39634 chr10 manual_curation exon 5177357 5177868 . - . Parent=GSCOCT00034671001 | |
| 39635 chr10 manual_curation CDS 5180584 5180712 . - 0 Parent=GSCOCT00034671001 | |
| 39636 chr10 manual_curation CDS 5179703 5179773 . - 0 Parent=GSCOCT00034671001 | |
| 39637 chr10 manual_curation CDS 5179168 5179281 . - 2 Parent=GSCOCT00034671001 | |
| 39638 chr10 manual_curation CDS 5178838 5178920 . - 2 Parent=GSCOCT00034671001 | |
| 39639 chr10 manual_curation CDS 5178689 5178762 . - 1 Parent=GSCOCT00034671001 | |
| 39640 chr10 manual_curation CDS 5178453 5178572 . - 0 Parent=GSCOCT00034671001 | |
| 39641 chr10 manual_curation CDS 5178052 5178147 . - 0 Parent=GSCOCT00034671001 | |
| 39642 chr10 manual_curation CDS 5177785 5177868 . - 0 Parent=GSCOCT00034671001 | |
| 39643 chr10 manual_curation gene 5182987 5191644 . - . ID=GSCOCG00034670001;Name=Cc10_g06370 | |
| 39644 chr10 manual_curation mRNA 5182987 5191644 . - . ID=GSCOCT00034670001;Parent=GSCOCG00034670001;Name=Cc10_g06370 | |
| 39645 chr10 manual_curation polypeptide 5183385 5191528 . - . ID=GSCOCP00034670001;Dbxref=GENE3D:G3DSA:3.30.70.580,GENE3D:G3DSA:3.30.70.660,HAMAP:MF_00171,InterPro:IPR001406,InterPro:IPR020094,InterPro:IPR020095,InterPro:IPR020097,InterPro:IPR020103,PANTHER:PTHR11142,PFAM:PF01416,SUPERFAMILY:SSF55120,SwissProt:Q3SX07,SwissProt:Q9BZE2,SwissProt:Q9JI38,TAIR:AT1G34150.1,TAIR:AT3G06950.1,TIGRFAMs:TIGR00071,TrEMBL:B9GT52,TrEMBL:B9SM90,TrEMBL:F6HJC9;Derives_from=GSCOCT00034670001;Name=Cc10_g06370;Ontology_term=CC_evidence_code:ISS,GO:0001522,GO:0003723,GO:0009451,GO:0009982,CC_EC_number:5.4.99.12,PRODUCT:Putative tRNA pseudouridine(38/39) synthase,CC_functional_completeness:complete,CC_gene:PUS3,CC_gene:Pus3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034670001~ Putative tRNA pseudouridine(38/39) synthase~ PUS3~ complete;original_location=join(3869674..3869757%2C3869854..3869913%2C3870026..3870128%2C3870529..3870601%2C3871028..3871073%2C3871813..3871926%2C3872542..3872629%2C3872945..3873038%2C3873883..3873943%2C3874057..3874187%2C3875625..3875742%2C3875911..3876034%2C3876515..3876622%2C3876711..3876788%2C3877768..3877817);owner=coffea | |
| 39646 chr10 manual_curation exon 5191445 5191644 . - . Parent=GSCOCT00034670001 | |
| 39647 chr10 manual_curation exon 5191289 5191348 . - . Parent=GSCOCT00034670001 | |
| 39648 chr10 manual_curation exon 5191074 5191176 . - . Parent=GSCOCT00034670001 | |
| 39649 chr10 manual_curation exon 5190601 5190673 . - . Parent=GSCOCT00034670001 | |
| 39650 chr10 manual_curation exon 5190129 5190174 . - . Parent=GSCOCT00034670001 | |
| 39651 chr10 manual_curation exon 5189276 5189389 . - . Parent=GSCOCT00034670001 | |
| 39652 chr10 manual_curation exon 5188573 5188660 . - . Parent=GSCOCT00034670001 | |
| 39653 chr10 manual_curation exon 5188164 5188257 . - . Parent=GSCOCT00034670001 | |
| 39654 chr10 manual_curation exon 5187259 5187319 . - . Parent=GSCOCT00034670001 | |
| 39655 chr10 manual_curation exon 5187015 5187145 . - . Parent=GSCOCT00034670001 | |
| 39656 chr10 manual_curation exon 5185460 5185577 . - . Parent=GSCOCT00034670001 | |
| 39657 chr10 manual_curation exon 5185168 5185291 . - . Parent=GSCOCT00034670001 | |
| 39658 chr10 manual_curation exon 5184580 5184687 . - . Parent=GSCOCT00034670001 | |
| 39659 chr10 manual_curation exon 5184414 5184491 . - . Parent=GSCOCT00034670001 | |
| 39660 chr10 manual_curation exon 5182987 5183434 . - . Parent=GSCOCT00034670001 | |
| 39661 chr10 manual_curation CDS 5191445 5191528 . - 0 Parent=GSCOCT00034670001 | |
| 39662 chr10 manual_curation CDS 5191289 5191348 . - 0 Parent=GSCOCT00034670001 | |
| 39663 chr10 manual_curation CDS 5191074 5191176 . - 0 Parent=GSCOCT00034670001 | |
| 39664 chr10 manual_curation CDS 5190601 5190673 . - 1 Parent=GSCOCT00034670001 | |
| 39665 chr10 manual_curation CDS 5190129 5190174 . - 2 Parent=GSCOCT00034670001 | |
| 39666 chr10 manual_curation CDS 5189276 5189389 . - 0 Parent=GSCOCT00034670001 | |
| 39667 chr10 manual_curation CDS 5188573 5188660 . - 0 Parent=GSCOCT00034670001 | |
| 39668 chr10 manual_curation CDS 5188164 5188257 . - 1 Parent=GSCOCT00034670001 | |
| 39669 chr10 manual_curation CDS 5187259 5187319 . - 2 Parent=GSCOCT00034670001 | |
| 39670 chr10 manual_curation CDS 5187015 5187145 . - 0 Parent=GSCOCT00034670001 | |
| 39671 chr10 manual_curation CDS 5185460 5185577 . - 2 Parent=GSCOCT00034670001 | |
| 39672 chr10 manual_curation CDS 5185168 5185291 . - 0 Parent=GSCOCT00034670001 | |
| 39673 chr10 manual_curation CDS 5184580 5184687 . - 1 Parent=GSCOCT00034670001 | |
| 39674 chr10 manual_curation CDS 5184414 5184491 . - 1 Parent=GSCOCT00034670001 | |
| 39675 chr10 manual_curation CDS 5183385 5183434 . - 1 Parent=GSCOCT00034670001 | |
| 39676 chr10 manual_curation gene 5194634 5197294 . + . ID=GSCOCG00034668001;Name=Cc10_g06380 | |
| 39677 chr10 manual_curation mRNA 5194634 5197294 . + . ID=GSCOCT00034668001;Parent=GSCOCG00034668001;Name=Cc10_g06380 | |
| 39678 chr10 manual_curation polypeptide 5194634 5197294 . + . ID=GSCOCP00034668001;Dbxref=InterPro:IPR003891,PFAM:PF02847,PROFILE:PS51366,SMART:SM00544,SwissProt:Q53EL6,SwissProt:Q98TX3,SwissProt:Q9JID1,TAIR:AT1G22730.1,TAIR:AT4G24800.1,TAIR:AT5G63190.1,TrEMBL:B9H7Y5,TrEMBL:G7KQ72,TrEMBL:I1JDA0;Derives_from=GSCOCT00034668001;Name=Cc10_g06380;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Programmed cell death protein 4,CC_functional_completeness:modules,CC_gene:PDCD4,CC_gene:Pdcd4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034668001~ Putative Programmed cell death protein 4~ PDCD4~ modules;original_location=complement(join(3866301..3866568%2C3865895..3865978%2C3865789..3865847%2C3863908..3865743));owner=coffea | |
| 39679 chr10 manual_curation exon 5195459 5197294 . + . Parent=GSCOCT00034668001 | |
| 39680 chr10 manual_curation exon 5195355 5195413 . + . Parent=GSCOCT00034668001 | |
| 39681 chr10 manual_curation exon 5195224 5195307 . + . Parent=GSCOCT00034668001 | |
| 39682 chr10 manual_curation exon 5194634 5194901 . + . Parent=GSCOCT00034668001 | |
| 39683 chr10 manual_curation CDS 5195459 5197294 . + 0 Parent=GSCOCT00034668001 | |
| 39684 chr10 manual_curation CDS 5195355 5195413 . + 1 Parent=GSCOCT00034668001 | |
| 39685 chr10 manual_curation CDS 5195224 5195307 . + 1 Parent=GSCOCT00034668001 | |
| 39686 chr10 manual_curation CDS 5194634 5194901 . + 0 Parent=GSCOCT00034668001 | |
| 39687 chr10 manual_curation gene 5205190 5208458 . + . ID=GSCOCG00034666001;Name=Cc10_g06390 | |
| 39688 chr10 manual_curation mRNA 5205190 5208458 . + . ID=GSCOCT00034666001;Parent=GSCOCG00034666001;Name=Cc10_g06390 | |
| 39689 chr10 manual_curation polypeptide 5205285 5208209 . + . ID=GSCOCP00034666001;Dbxref=TAIR:AT1G71780.1,TrEMBL:B9GT58,TrEMBL:B9SM88,TrEMBL:I1MP14;Derives_from=GSCOCT00034666001;Name=Cc10_g06390;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034666001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endoplasmic reticulum%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B Has 34 Blast hits to 34 proteins in 11 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 34%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(3855561..3855917%2C3852993..3853208));owner=coffea | |
| 39690 chr10 manual_curation exon 5207994 5208458 . + . Parent=GSCOCT00034666001 | |
| 39691 chr10 manual_curation exon 5205190 5205641 . + . Parent=GSCOCT00034666001 | |
| 39692 chr10 manual_curation CDS 5207994 5208209 . + 0 Parent=GSCOCT00034666001 | |
| 39693 chr10 manual_curation CDS 5205285 5205641 . + 0 Parent=GSCOCT00034666001 | |
| 39694 chr10 manual_curation gene 5233254 5234426 . - . ID=GSCOCG00034664001;Name=Cc10_g06400 | |
| 39695 chr10 manual_curation mRNA 5233254 5234426 . - . ID=GSCOCT00034664001;Parent=GSCOCG00034664001;Name=Cc10_g06400 | |
| 39696 chr10 manual_curation polypeptide 5233254 5234426 . - . ID=GSCOCP00034664001;Dbxref=InterPro:IPR003657,PFAM:PF03106,PROFILE:PS50811,SMART:SM00774,SwissProt:Q8VWQ5,SwissProt:Q93WU9,SwissProt:Q9SJ09,TAIR:AT2G21900.1,TAIR:AT5G26170.1,TAIR:AT5G64810.1,TrEMBL:B9H5K7,TrEMBL:B9HG35,TrEMBL:F6H4B4;Derives_from=GSCOCT00034664001;Name=Cc10_g06400;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0043565,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Probable WRKY transcription factor 51,CC_functional_completeness:fragment,CC_gene:WRKY51,CC_gene:WRKY50,CC_gene:WRKY59;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034664001~ Probable WRKY transcription factor 51~ WRKY51~ fragment;original_location=join(3826776..3826900%2C3827756..3827948);owner=coffea | |
| 39697 chr10 manual_curation exon 5234302 5234426 . - . Parent=GSCOCT00034664001 | |
| 39698 chr10 manual_curation exon 5233254 5233446 . - . Parent=GSCOCT00034664001 | |
| 39699 chr10 manual_curation CDS 5234302 5234426 . - 0 Parent=GSCOCT00034664001 | |
| 39700 chr10 manual_curation CDS 5233254 5233446 . - 2 Parent=GSCOCT00034664001 | |
| 39701 chr10 manual_curation gene 5250055 5254611 . + . ID=GSCOCG00034663001;Name=Cc10_g06410 | |
| 39702 chr10 manual_curation mRNA 5250055 5254611 . + . ID=GSCOCT00034663001;Parent=GSCOCG00034663001;Name=Cc10_g06410 | |
| 39703 chr10 manual_curation polypeptide 5250158 5254534 . + . ID=GSCOCP00034663001;Dbxref=InterPro:IPR001806,InterPro:IPR002041,InterPro:IPR003577,InterPro:IPR003578,InterPro:IPR003579,InterPro:IPR005225,InterPro:IPR013753,InterPro:IPR020851,PFAM:PF00071,PRINTS:PR00449,PROFILE:PS51419,SMART:SM00173,SMART:SM00174,SMART:SM00175,SMART:SM00176,SwissProt:Q41640,SwissProt:Q43463,SwissProt:Q948K8,TAIR:AT1G22740.1,TAIR:AT1G52280.1,TAIR:AT4G09720.3,TIGRFAMs:TIGR00231,TrEMBL:B9SM85,TrEMBL:D7TFS7,TrEMBL:Q40211;Derives_from=GSCOCT00034663001;Name=Cc10_g06410;Ontology_term=CC_evidence_code:ISS,GO:0003924,GO:0005515,GO:0005525,GO:0005622,GO:0006886,GO:0006913,GO:0007165,GO:0007264,GO:0015031,CC_EC_number:missing_EC_number,PRODUCT:Ras-related protein Rab7,CC_functional_completeness:complete,CC_gene:RABG3A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034663001~ Ras-related protein Rab7~ RABG3A~ complete;original_location=complement(join(3810992..3811044%2C3810734..3810760%2C3810259..3810358%2C3810015..3810161%2C3808346..3808426%2C3808126..3808271%2C3806668..3806731));owner=coffea | |
| 39704 chr10 manual_curation exon 5254471 5254611 . + . Parent=GSCOCT00034663001 | |
| 39705 chr10 manual_curation exon 5252931 5253076 . + . Parent=GSCOCT00034663001 | |
| 39706 chr10 manual_curation exon 5252776 5252856 . + . Parent=GSCOCT00034663001 | |
| 39707 chr10 manual_curation exon 5251041 5251187 . + . Parent=GSCOCT00034663001 | |
| 39708 chr10 manual_curation exon 5250844 5250943 . + . Parent=GSCOCT00034663001 | |
| 39709 chr10 manual_curation exon 5250442 5250468 . + . Parent=GSCOCT00034663001 | |
| 39710 chr10 manual_curation exon 5250055 5250210 . + . Parent=GSCOCT00034663001 | |
| 39711 chr10 manual_curation CDS 5254471 5254534 . + 2 Parent=GSCOCT00034663001 | |
| 39712 chr10 manual_curation CDS 5252931 5253076 . + 0 Parent=GSCOCT00034663001 | |
| 39713 chr10 manual_curation CDS 5252776 5252856 . + 0 Parent=GSCOCT00034663001 | |
| 39714 chr10 manual_curation CDS 5251041 5251187 . + 0 Parent=GSCOCT00034663001 | |
| 39715 chr10 manual_curation CDS 5250844 5250943 . + 2 Parent=GSCOCT00034663001 | |
| 39716 chr10 manual_curation CDS 5250442 5250468 . + 2 Parent=GSCOCT00034663001 | |
| 39717 chr10 manual_curation CDS 5250158 5250210 . + 0 Parent=GSCOCT00034663001 | |
| 39718 chr10 manual_curation gene 5255889 5262247 . + . ID=GSCOCG00034661001;Name=Cc10_g06420 | |
| 39719 chr10 manual_curation mRNA 5255889 5262247 . + . ID=GSCOCT00034661001;Parent=GSCOCG00034661001;Name=Cc10_g06420 | |
| 39720 chr10 manual_curation polypeptide 5256197 5260906 . + . ID=GSCOCP00034661001;Dbxref=InterPro:IPR009943,PFAM:PF07343,TAIR:AT1G22750.4,TrEMBL:B9GT61,TrEMBL:C6TK41,TrEMBL:I1NH64;Derives_from=GSCOCT00034661001;Name=Cc10_g06420;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B CONTAINS InterPro DOMAIN/s,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034661001~ unknown protein%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1475 (InterPro:IPR009943)%3B Has 186 Blast hits to 155 proteins in 21 species: Archae - 0%3B Bacteria - 8%3B Metazoa - 3%3B Fungi - 0%3B Plants - 65%3B Viruses - 0%3B Other Eukaryotes - 110 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(3804881..3805005%2C3804527..3804578%2C3803856..3803929%2C3803284..3803385%2C3802489..3802629%2C3801381..3801432%2C3801163..3801236%2C3800296..3800395));owner=coffea | |
| 39721 chr10 manual_curation exon 5260807 5262247 . + . Parent=GSCOCT00034661001 | |
| 39722 chr10 manual_curation exon 5259966 5260039 . + . Parent=GSCOCT00034661001 | |
| 39723 chr10 manual_curation exon 5259770 5259821 . + . Parent=GSCOCT00034661001 | |
| 39724 chr10 manual_curation exon 5258573 5258713 . + . Parent=GSCOCT00034661001 | |
| 39725 chr10 manual_curation exon 5257817 5257918 . + . Parent=GSCOCT00034661001 | |
| 39726 chr10 manual_curation exon 5257273 5257346 . + . Parent=GSCOCT00034661001 | |
| 39727 chr10 manual_curation exon 5256624 5256675 . + . Parent=GSCOCT00034661001 | |
| 39728 chr10 manual_curation exon 5255889 5256321 . + . Parent=GSCOCT00034661001 | |
| 39729 chr10 manual_curation CDS 5260807 5260906 . + 2 Parent=GSCOCT00034661001 | |
| 39730 chr10 manual_curation CDS 5259966 5260039 . + 0 Parent=GSCOCT00034661001 | |
| 39731 chr10 manual_curation CDS 5259770 5259821 . + 2 Parent=GSCOCT00034661001 | |
| 39732 chr10 manual_curation CDS 5258573 5258713 . + 2 Parent=GSCOCT00034661001 | |
| 39733 chr10 manual_curation CDS 5257817 5257918 . + 2 Parent=GSCOCT00034661001 | |
| 39734 chr10 manual_curation CDS 5257273 5257346 . + 0 Parent=GSCOCT00034661001 | |
| 39735 chr10 manual_curation CDS 5256624 5256675 . + 2 Parent=GSCOCT00034661001 | |
| 39736 chr10 manual_curation CDS 5256197 5256321 . + 0 Parent=GSCOCT00034661001 | |
| 39737 chr10 manual_curation gene 5268002 5270936 . - . ID=GSCOCG00034660001;Name=Cc10_g06430 | |
| 39738 chr10 manual_curation mRNA 5268002 5270936 . - . ID=GSCOCT00034660001;Parent=GSCOCG00034660001;Name=Cc10_g06430 | |
| 39739 chr10 manual_curation polypeptide 5268002 5270936 . - . ID=GSCOCP00034660001;Dbxref=GENE3D:G3DSA:2.60.40.420,InterPro:IPR001117,InterPro:IPR002355,InterPro:IPR008972,InterPro:IPR011706,InterPro:IPR011707,InterPro:IPR017761,PFAM:PF00394,PFAM:PF07731,PFAM:PF07732,PROSITE:PS00079,PROSITE:PS00080,SUPERFAMILY:SSF49503,SwissProt:Q84J37,SwissProt:Q941X2,SwissProt:Q9FY79,TAIR:AT5G05390.1,TAIR:AT5G09360.1,TAIR:AT5G48100.1,TIGRFAMs:TIGR03389,TrEMBL:F6HRW3,TrEMBL:F6HW97,TrEMBL:F6HWA2;Derives_from=GSCOCT00034660001;Name=Cc10_g06430;Ontology_term=CC_evidence_code:ISS,GO:0005507,GO:0008471,GO:0016491,GO:0046274,GO:0048046,GO:0055114,CC_EC_number:1.10.3.3,PRODUCT:Laccase-14,CC_functional_completeness:complete,CC_gene:LAC14,CC_gene:TT10,CC_gene:LAC3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034660001~ Laccase-14~ LAC14~ complete;original_location=join(3790266..3790358%2C3790789..3790940%2C3791041..3791285%2C3791423..3791551%2C3791850..3792788%2C3793070..3793200);owner=coffea | |
| 39740 chr10 manual_curation exon 5270844 5270936 . - . Parent=GSCOCT00034660001 | |
| 39741 chr10 manual_curation exon 5270262 5270413 . - . Parent=GSCOCT00034660001 | |
| 39742 chr10 manual_curation exon 5269917 5270161 . - . Parent=GSCOCT00034660001 | |
| 39743 chr10 manual_curation exon 5269651 5269779 . - . Parent=GSCOCT00034660001 | |
| 39744 chr10 manual_curation exon 5268414 5269352 . - . Parent=GSCOCT00034660001 | |
| 39745 chr10 manual_curation exon 5268002 5268132 . - . Parent=GSCOCT00034660001 | |
| 39746 chr10 manual_curation CDS 5270844 5270936 . - 0 Parent=GSCOCT00034660001 | |
| 39747 chr10 manual_curation CDS 5270262 5270413 . - 0 Parent=GSCOCT00034660001 | |
| 39748 chr10 manual_curation CDS 5269917 5270161 . - 2 Parent=GSCOCT00034660001 | |
| 39749 chr10 manual_curation CDS 5269651 5269779 . - 1 Parent=GSCOCT00034660001 | |
| 39750 chr10 manual_curation CDS 5268414 5269352 . - 1 Parent=GSCOCT00034660001 | |
| 39751 chr10 manual_curation CDS 5268002 5268132 . - 1 Parent=GSCOCT00034660001 | |
| 39752 chr10 manual_curation gene 5288170 5289034 . - . ID=GSCOCG00034656001;Name=Cc10_g06440 | |
| 39753 chr10 manual_curation mRNA 5288170 5289034 . - . ID=GSCOCT00034656001;Parent=GSCOCG00034656001;Name=Cc10_g06440 | |
| 39754 chr10 manual_curation polypeptide 5288170 5289034 . - . ID=GSCOCP00034656001;Dbxref=TAIR:AT1G71760.2,TrEMBL:D7KYX8,TrEMBL:Q5BPV4,TrEMBL:Q9M9H0;Derives_from=GSCOCT00034656001;Name=Cc10_g06440;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034656001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(3772168..3772224%2C3772338..3772643%2C3772874..3773032);owner=coffea | |
| 39755 chr10 manual_curation exon 5288978 5289034 . - . Parent=GSCOCT00034656001 | |
| 39756 chr10 manual_curation exon 5288559 5288864 . - . Parent=GSCOCT00034656001 | |
| 39757 chr10 manual_curation exon 5288170 5288328 . - . Parent=GSCOCT00034656001 | |
| 39758 chr10 manual_curation CDS 5288978 5289034 . - 0 Parent=GSCOCT00034656001 | |
| 39759 chr10 manual_curation CDS 5288559 5288864 . - 0 Parent=GSCOCT00034656001 | |
| 39760 chr10 manual_curation CDS 5288170 5288328 . - 0 Parent=GSCOCT00034656001 | |
| 39761 chr10 manual_curation gene 5296216 5299257 . - . ID=GSCOCG00034654001;Name=Cc10_g06450 | |
| 39762 chr10 manual_curation mRNA 5296216 5299257 . - . ID=GSCOCT00034654001;Parent=GSCOCG00034654001;Name=Cc10_g06450 | |
| 39763 chr10 manual_curation polypeptide 5296771 5299091 . - . ID=GSCOCP00034654001;Dbxref=InterPro:IPR000836,InterPro:IPR005904,PFAM:PF00156,SwissProt:Q724J4,SwissProt:Q839B2,SwissProt:Q8YAC7,TAIR:AT1G71750.2,TIGRFAMs:TIGR01203,TrEMBL:A1YUN0,TrEMBL:A9PD32,TrEMBL:B9SM74;Derives_from=GSCOCT00034654001;Name=Cc10_g06450;Ontology_term=CC_evidence_code:ISS,GO:0004422,GO:0005737,GO:0006166,GO:0009116,CC_EC_number:2.4.2.8,PRODUCT:Putative Hypoxanthine-guanine phosphoribosyltransferase,CC_functional_completeness:complete,CC_gene:hpt,CC_gene:tilS/hprT;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034654001~ Putative Hypoxanthine-guanine phosphoribosyltransferase~ hpt~ complete;original_location=join(3762111..3762428%2C3763321..3763485%2C3764333..3764431);owner=coffea | |
| 39764 chr10 manual_curation exon 5298774 5299257 . - . Parent=GSCOCT00034654001 | |
| 39765 chr10 manual_curation exon 5297717 5297881 . - . Parent=GSCOCT00034654001 | |
| 39766 chr10 manual_curation exon 5296216 5296869 . - . Parent=GSCOCT00034654001 | |
| 39767 chr10 manual_curation CDS 5298774 5299091 . - 0 Parent=GSCOCT00034654001 | |
| 39768 chr10 manual_curation CDS 5297717 5297881 . - 0 Parent=GSCOCT00034654001 | |
| 39769 chr10 manual_curation CDS 5296771 5296869 . - 0 Parent=GSCOCT00034654001 | |
| 39770 chr10 manual_curation gene 5300326 5306297 . + . ID=GSCOCG00034653001;Name=Cc10_g06460 | |
| 39771 chr10 manual_curation mRNA 5300326 5306297 . + . ID=GSCOCT00034653001;Parent=GSCOCG00034653001;Name=Cc10_g06460 | |
| 39772 chr10 manual_curation polypeptide 5300850 5305885 . + . ID=GSCOCP00034653001;Dbxref=InterPro:IPR001650,InterPro:IPR011545,InterPro:IPR014001,InterPro:IPR014014,InterPro:IPR014021,PFAM:PF00270,PFAM:PF00271,PROFILE:PS51192,PROFILE:PS51194,PROFILE:PS51195,SMART:SM00487,SMART:SM00490,SwissProt:Q56X76,SwissProt:Q5ACK7,SwissProt:Q5VRY0,TAIR:AT1G55150.1,TAIR:AT3G06980.1,TAIR:AT4G09730.1,TrEMBL:B9H7X6,TrEMBL:F6HJE2,TrEMBL:I1JDA7;Derives_from=GSCOCT00034653001;Name=Cc10_g06460;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0004386,GO:0005524,GO:0008026,CC_EC_number:missing_EC_number,PRODUCT:DEAD-box ATP-dependent RNA helicase 39,CC_functional_completeness:complete,CC_gene:RH39,CC_gene:Os01g0184500,CC_gene:DRS1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034653001~ DEAD-box ATP-dependent RNA helicase 39~ RH39~ complete;original_location=complement(join(3760206..3760352%2C3758874..3758969%2C3758595..3758783%2C3758364..3758504%2C3757803..3757943%2C3756854..3756996%2C3756203..3756332%2C3756059..3756107%2C3755317..3755828));owner=coffea | |
| 39773 chr10 manual_curation exon 5305374 5306297 . + . Parent=GSCOCT00034653001 | |
| 39774 chr10 manual_curation exon 5305095 5305143 . + . Parent=GSCOCT00034653001 | |
| 39775 chr10 manual_curation exon 5304870 5304999 . + . Parent=GSCOCT00034653001 | |
| 39776 chr10 manual_curation exon 5304206 5304348 . + . Parent=GSCOCT00034653001 | |
| 39777 chr10 manual_curation exon 5303259 5303399 . + . Parent=GSCOCT00034653001 | |
| 39778 chr10 manual_curation exon 5302698 5302838 . + . Parent=GSCOCT00034653001 | |
| 39779 chr10 manual_curation exon 5302419 5302607 . + . Parent=GSCOCT00034653001 | |
| 39780 chr10 manual_curation exon 5302233 5302328 . + . Parent=GSCOCT00034653001 | |
| 39781 chr10 manual_curation exon 5300326 5300996 . + . Parent=GSCOCT00034653001 | |
| 39782 chr10 manual_curation CDS 5305374 5305885 . + 1 Parent=GSCOCT00034653001 | |
| 39783 chr10 manual_curation CDS 5305095 5305143 . + 0 Parent=GSCOCT00034653001 | |
| 39784 chr10 manual_curation CDS 5304870 5304999 . + 2 Parent=GSCOCT00034653001 | |
| 39785 chr10 manual_curation CDS 5304206 5304348 . + 0 Parent=GSCOCT00034653001 | |
| 39786 chr10 manual_curation CDS 5303259 5303399 . + 0 Parent=GSCOCT00034653001 | |
| 39787 chr10 manual_curation CDS 5302698 5302838 . + 0 Parent=GSCOCT00034653001 | |
| 39788 chr10 manual_curation CDS 5302419 5302607 . + 0 Parent=GSCOCT00034653001 | |
| 39789 chr10 manual_curation CDS 5302233 5302328 . + 0 Parent=GSCOCT00034653001 | |
| 39790 chr10 manual_curation CDS 5300850 5300996 . + 0 Parent=GSCOCT00034653001 | |
| 39791 chr10 manual_curation gene 5307527 5308021 . + . ID=GSCOCG00034651001;Name=Cc10_g06470 | |
| 39792 chr10 manual_curation mRNA 5307527 5308021 . + . ID=GSCOCT00034651001;Parent=GSCOCG00034651001;Name=Cc10_g06470 | |
| 39793 chr10 manual_curation polypeptide 5307527 5308021 . + . ID=GSCOCP00034651001;Dbxref=TAIR:AT1G71730.1,TrEMBL:B9H7X4,TrEMBL:B9PA78,TrEMBL:F6HJE3;Derives_from=GSCOCT00034651001;Name=Cc10_g06470;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034651001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=complement(3753181..3753675);owner=coffea | |
| 39794 chr10 manual_curation exon 5307527 5308021 . + . Parent=GSCOCT00034651001 | |
| 39795 chr10 manual_curation CDS 5307527 5308021 . + 0 Parent=GSCOCT00034651001 | |
| 39796 chr10 manual_curation gene 5310686 5314432 . - . ID=GSCOCG00034649001;Name=Cc10_g06480 | |
| 39797 chr10 manual_curation mRNA 5310686 5314432 . - . ID=GSCOCT00034649001;Parent=GSCOCG00034649001;Name=Cc10_g06480 | |
| 39798 chr10 manual_curation polypeptide 5311544 5314432 . - . ID=GSCOCP00034649001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:C0LGF5,SwissProt:C0LGV1,SwissProt:Q9LHP4,TAIR:AT1G34110.1,TAIR:AT3G24240.1,TAIR:AT5G48940.1,TrEMBL:B9GT65,TrEMBL:F6HJE5,TrEMBL:I1NH60;Derives_from=GSCOCT00034649001;Name=Cc10_g06480;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Probable LRR receptor-like serine/threonine-protein kinase At1g34110,CC_functional_completeness:complete,CC_gene:At1g34110,CC_gene:RCH2,CC_gene:RCH1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034649001~ Probable LRR receptor-like serine/threonine-protein kinase At1g34110~ At1g34110~ complete;original_location=3746770..3749658;owner=coffea | |
| 39799 chr10 manual_curation exon 5310686 5314432 . - . Parent=GSCOCT00034649001 | |
| 39800 chr10 manual_curation CDS 5311544 5314432 . - 0 Parent=GSCOCT00034649001 | |
| 39801 chr10 manual_curation gene 5318538 5325551 . - . ID=GSCOCG00034648001;Name=Cc10_g06490 | |
| 39802 chr10 manual_curation mRNA 5318538 5325551 . - . ID=GSCOCT00034648001;Parent=GSCOCG00034648001;Name=Cc10_g06490 | |
| 39803 chr10 manual_curation polypeptide 5319076 5325532 . - . ID=GSCOCP00034648001;Dbxref=GENE3D:G3DSA:2.40.50.140,InterPro:IPR003029,InterPro:IPR012340,InterPro:IPR016027,PFAM:PF00575,PROFILE:PS50126,SUPERFAMILY:SSF50249,SwissProt:P29344,SwissProt:P46228,SwissProt:P73530,TAIR:AT1G71720.1,TAIR:AT5G30510.1,TrEMBL:B9SM67,TrEMBL:F6HJE6,TrEMBL:I1LDC3;Derives_from=GSCOCT00034648001;Name=Cc10_g06490;Ontology_term=CC_evidence_code:ISS,GO:0003723,CC_EC_number:missing_EC_number,PRODUCT:Putative 30S ribosomal protein S1 homolog A,CC_functional_completeness:modules,CC_gene:rpsA,CC_gene:rps1A,CC_gene:RPS1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034648001~ Putative 30S ribosomal protein S1 homolog A~ rpsA~ modules;original_location=join(3735670..3735707%2C3735838..3736558%2C3737784..3737858%2C3737960..3738031%2C3738466..3738546%2C3738708..3738805%2C3740611..3740736%2C3741780..3741828%2C3741947..3742126);owner=coffea | |
| 39804 chr10 manual_curation exon 5325495 5325551 . - . Parent=GSCOCT00034648001 | |
| 39805 chr10 manual_curation exon 5324644 5325364 . - . Parent=GSCOCT00034648001 | |
| 39806 chr10 manual_curation exon 5323344 5323418 . - . Parent=GSCOCT00034648001 | |
| 39807 chr10 manual_curation exon 5323171 5323242 . - . Parent=GSCOCT00034648001 | |
| 39808 chr10 manual_curation exon 5322656 5322736 . - . Parent=GSCOCT00034648001 | |
| 39809 chr10 manual_curation exon 5322397 5322494 . - . Parent=GSCOCT00034648001 | |
| 39810 chr10 manual_curation exon 5320466 5320591 . - . Parent=GSCOCT00034648001 | |
| 39811 chr10 manual_curation exon 5319374 5319422 . - . Parent=GSCOCT00034648001 | |
| 39812 chr10 manual_curation exon 5318538 5319255 . - . Parent=GSCOCT00034648001 | |
| 39813 chr10 manual_curation CDS 5325495 5325532 . - 0 Parent=GSCOCT00034648001 | |
| 39814 chr10 manual_curation CDS 5324644 5325364 . - 2 Parent=GSCOCT00034648001 | |
| 39815 chr10 manual_curation CDS 5323344 5323418 . - 0 Parent=GSCOCT00034648001 | |
| 39816 chr10 manual_curation CDS 5323171 5323242 . - 0 Parent=GSCOCT00034648001 | |
| 39817 chr10 manual_curation CDS 5322656 5322736 . - 0 Parent=GSCOCT00034648001 | |
| 39818 chr10 manual_curation CDS 5322397 5322494 . - 0 Parent=GSCOCT00034648001 | |
| 39819 chr10 manual_curation CDS 5320466 5320591 . - 2 Parent=GSCOCT00034648001 | |
| 39820 chr10 manual_curation CDS 5319374 5319422 . - 2 Parent=GSCOCT00034648001 | |
| 39821 chr10 manual_curation CDS 5319076 5319255 . - 0 Parent=GSCOCT00034648001 | |
| 39822 chr10 manual_curation gene 5331127 5334792 . - . ID=GSCOCG00034647001;Name=Cc10_g06500 | |
| 39823 chr10 manual_curation mRNA 5331127 5334792 . - . ID=GSCOCT00034647001;Parent=GSCOCG00034647001;Name=Cc10_g06500 | |
| 39824 chr10 manual_curation polypeptide 5331393 5334563 . - . ID=GSCOCP00034647001;Dbxref=InterPro:IPR000620,InterPro:IPR004853,PFAM:PF00892,PFAM:PF03151,SwissProt:Q94GB1,SwissProt:Q9FZ95,SwissProt:Q9FZ96,TAIR:AT1G28220.1,TAIR:AT1G28230.1,TAIR:AT2G33750.1,TrEMBL:A5CAM1,TrEMBL:B9RJS5,TrEMBL:F6H0Z3;Derives_from=GSCOCT00034647001;Name=Cc10_g06500;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Purine permease 3,CC_functional_completeness:complete,CC_gene:PUP3,CC_gene:PUP1,CC_gene:PUP2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034647001~ Purine permease 3~ PUP3~ complete;original_location=join(3726639..3727346%2C3729456..3729809);owner=coffea | |
| 39825 chr10 manual_curation exon 5333856 5334792 . - . Parent=GSCOCT00034647001 | |
| 39826 chr10 manual_curation exon 5331127 5331746 . - . Parent=GSCOCT00034647001 | |
| 39827 chr10 manual_curation CDS 5333856 5334563 . - 0 Parent=GSCOCT00034647001 | |
| 39828 chr10 manual_curation CDS 5331393 5331746 . - 0 Parent=GSCOCT00034647001 | |
| 39829 chr10 manual_curation gene 5365749 5369791 . + . ID=GSCOCG00034643001;Name=Cc10_g06510 | |
| 39830 chr10 manual_curation mRNA 5365749 5369791 . + . ID=GSCOCT00034643001;Parent=GSCOCG00034643001;Name=Cc10_g06510 | |
| 39831 chr10 manual_curation polypeptide 5365749 5369472 . + . ID=GSCOCP00034643001;Dbxref=InterPro:IPR002528,PANTHER:PTHR11206,PFAM:PF01554,SwissProt:Q8RWF5,SwissProt:Q9LUH3,SwissProt:Q9LYT3,TAIR:AT5G10420.1,TAIR:AT5G44050.1,TAIR:AT5G65380.1,TIGRFAMs:TIGR00797,TrEMBL:A5BEP1,TrEMBL:B9H6Y9,TrEMBL:E0CRR4;Derives_from=GSCOCT00034643001;Name=Cc10_g06510;Ontology_term=CC_evidence_code:ISS,GO:0006855,GO:0015238,GO:0015297,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein TRANSPARENT TESTA 12,CC_functional_completeness:complete,CC_gene:TT12,CC_gene:LAL5,CC_gene:DTXL5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034643001~ Putative Protein TRANSPARENT TESTA 12~ TT12~ complete;original_location=complement(join(3695139..3695453%2C3693911..3694452%2C3693740..3693826%2C3693599..3693655%2C3692634..3692872%2C3692386..3692504%2C3692082..3692168%2C3691730..3691813));owner=coffea | |
| 39832 chr10 manual_curation exon 5369389 5369791 . + . Parent=GSCOCT00034643001 | |
| 39833 chr10 manual_curation exon 5369034 5369120 . + . Parent=GSCOCT00034643001 | |
| 39834 chr10 manual_curation exon 5368698 5368816 . + . Parent=GSCOCT00034643001 | |
| 39835 chr10 manual_curation exon 5368330 5368568 . + . Parent=GSCOCT00034643001 | |
| 39836 chr10 manual_curation exon 5367547 5367603 . + . Parent=GSCOCT00034643001 | |
| 39837 chr10 manual_curation exon 5367376 5367462 . + . Parent=GSCOCT00034643001 | |
| 39838 chr10 manual_curation exon 5366750 5367291 . + . Parent=GSCOCT00034643001 | |
| 39839 chr10 manual_curation exon 5365749 5366063 . + . Parent=GSCOCT00034643001 | |
| 39840 chr10 manual_curation CDS 5369389 5369472 . + 0 Parent=GSCOCT00034643001 | |
| 39841 chr10 manual_curation CDS 5369034 5369120 . + 0 Parent=GSCOCT00034643001 | |
| 39842 chr10 manual_curation CDS 5368698 5368816 . + 1 Parent=GSCOCT00034643001 | |
| 39843 chr10 manual_curation CDS 5368330 5368568 . + 2 Parent=GSCOCT00034643001 | |
| 39844 chr10 manual_curation CDS 5367547 5367603 . + 2 Parent=GSCOCT00034643001 | |
| 39845 chr10 manual_curation CDS 5367376 5367462 . + 2 Parent=GSCOCT00034643001 | |
| 39846 chr10 manual_curation CDS 5366750 5367291 . + 0 Parent=GSCOCT00034643001 | |
| 39847 chr10 manual_curation CDS 5365749 5366063 . + 0 Parent=GSCOCT00034643001 | |
| 39848 chr10 manual_curation gene 5370375 5373938 . + . ID=GSCOCG00034642001;Name=Cc10_g06520 | |
| 39849 chr10 manual_curation mRNA 5370375 5373938 . + . ID=GSCOCT00034642001;Parent=GSCOCG00034642001;Name=Cc10_g06520 | |
| 39850 chr10 manual_curation polypeptide 5370375 5373938 . + . ID=GSCOCP00034642001;Dbxref=InterPro:IPR002528,PANTHER:PTHR11206,PFAM:PF01554,SwissProt:Q9LUH3,SwissProt:Q9LYT3,SwissProt:Q9SIA5,TAIR:AT5G10420.1,TAIR:AT5G44050.1,TAIR:AT5G65380.1,TIGRFAMs:TIGR00797,TrEMBL:B9HFS0,TrEMBL:F6H0Y9,TrEMBL:I1JVA1;Derives_from=GSCOCT00034642001;Name=Cc10_g06520;Ontology_term=CC_evidence_code:ISS,GO:0006855,GO:0015238,GO:0015297,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein TRANSPARENT TESTA 12,CC_functional_completeness:complete,CC_gene:TT12,CC_gene:LAL5,CC_gene:DTX1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034642001~ Putative Protein TRANSPARENT TESTA 12~ TT12~ complete;original_location=complement(join(3690519..3690827%2C3688901..3689442%2C3688739..3688825%2C3688523..3688579%2C3687867..3688105%2C3687659..3687777%2C3687264..3687479));owner=coffea | |
| 39851 chr10 manual_curation exon 5373723 5373938 . + . Parent=GSCOCT00034642001 | |
| 39852 chr10 manual_curation exon 5373425 5373543 . + . Parent=GSCOCT00034642001 | |
| 39853 chr10 manual_curation exon 5373097 5373335 . + . Parent=GSCOCT00034642001 | |
| 39854 chr10 manual_curation exon 5372623 5372679 . + . Parent=GSCOCT00034642001 | |
| 39855 chr10 manual_curation exon 5372377 5372463 . + . Parent=GSCOCT00034642001 | |
| 39856 chr10 manual_curation exon 5371760 5372301 . + . Parent=GSCOCT00034642001 | |
| 39857 chr10 manual_curation exon 5370375 5370683 . + . Parent=GSCOCT00034642001 | |
| 39858 chr10 manual_curation CDS 5373723 5373938 . + 0 Parent=GSCOCT00034642001 | |
| 39859 chr10 manual_curation CDS 5373425 5373543 . + 1 Parent=GSCOCT00034642001 | |
| 39860 chr10 manual_curation CDS 5373097 5373335 . + 2 Parent=GSCOCT00034642001 | |
| 39861 chr10 manual_curation CDS 5372623 5372679 . + 2 Parent=GSCOCT00034642001 | |
| 39862 chr10 manual_curation CDS 5372377 5372463 . + 2 Parent=GSCOCT00034642001 | |
| 39863 chr10 manual_curation CDS 5371760 5372301 . + 0 Parent=GSCOCT00034642001 | |
| 39864 chr10 manual_curation CDS 5370375 5370683 . + 0 Parent=GSCOCT00034642001 | |
| 39865 chr10 manual_curation gene 5377028 5379847 . + . ID=GSCOCG00034641001;Name=Cc10_g06530 | |
| 39866 chr10 manual_curation mRNA 5377028 5379847 . + . ID=GSCOCT00034641001;Parent=GSCOCG00034641001;Name=Cc10_g06530 | |
| 39867 chr10 manual_curation polypeptide 5377028 5379847 . + . ID=GSCOCP00034641001;Dbxref=InterPro:IPR013057,PFAM:PF01490,SwissProt:Q38967,SwissProt:Q9FF99,SwissProt:Q9FN04,TAIR:AT5G09220.1,TAIR:AT5G23810.1,TAIR:AT5G63850.1,TrEMBL:B9T658,TrEMBL:D7UAP6,TrEMBL:D7UAP7;Derives_from=GSCOCT00034641001;Name=Cc10_g06530;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Probable amino acid permease 7,CC_functional_completeness:complete,CC_gene:AAP7,CC_gene:AAP2,CC_gene:AAP4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034641001~ Probable amino acid permease 7~ AAP7~ complete;original_location=complement(join(3683922..3684174%2C3683256..3683349%2C3682611..3682828%2C3682380..3682513%2C3682065..3682292%2C3681355..3681753));owner=coffea | |
| 39868 chr10 manual_curation exon 5379449 5379847 . + . Parent=GSCOCT00034641001 | |
| 39869 chr10 manual_curation exon 5378910 5379137 . + . Parent=GSCOCT00034641001 | |
| 39870 chr10 manual_curation exon 5378689 5378822 . + . Parent=GSCOCT00034641001 | |
| 39871 chr10 manual_curation exon 5378374 5378591 . + . Parent=GSCOCT00034641001 | |
| 39872 chr10 manual_curation exon 5377853 5377946 . + . Parent=GSCOCT00034641001 | |
| 39873 chr10 manual_curation exon 5377028 5377280 . + . Parent=GSCOCT00034641001 | |
| 39874 chr10 manual_curation CDS 5379449 5379847 . + 0 Parent=GSCOCT00034641001 | |
| 39875 chr10 manual_curation CDS 5378910 5379137 . + 0 Parent=GSCOCT00034641001 | |
| 39876 chr10 manual_curation CDS 5378689 5378822 . + 1 Parent=GSCOCT00034641001 | |
| 39877 chr10 manual_curation CDS 5378374 5378591 . + 2 Parent=GSCOCT00034641001 | |
| 39878 chr10 manual_curation CDS 5377853 5377946 . + 1 Parent=GSCOCT00034641001 | |
| 39879 chr10 manual_curation CDS 5377028 5377280 . + 0 Parent=GSCOCT00034641001 | |
| 39880 chr10 manual_curation gene 5384689 5389550 . + . ID=GSCOCG00034640001;Name=Cc10_g06540 | |
| 39881 chr10 manual_curation mRNA 5384689 5389550 . + . ID=GSCOCT00034640001;Parent=GSCOCG00034640001;Name=Cc10_g06540 | |
| 39882 chr10 manual_curation polypeptide 5384689 5389550 . + . ID=GSCOCP00034640001;Dbxref=InterPro:IPR002528,PANTHER:PTHR11206,PFAM:PF01554,SwissProt:Q9LUH2,SwissProt:Q9LUH3,SwissProt:Q9LYT3,TAIR:AT5G10420.1,TAIR:AT5G44050.1,TAIR:AT5G65380.1,TIGRFAMs:TIGR00797,TrEMBL:B9GV15,TrEMBL:B9HFS0,TrEMBL:I1JVA1;Derives_from=GSCOCT00034640001;Name=Cc10_g06540;Ontology_term=CC_evidence_code:ISS,GO:0006855,GO:0015238,GO:0015297,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein TRANSPARENT TESTA 12,CC_functional_completeness:complete,CC_gene:TT12,CC_gene:LAL5,CC_gene:ALF5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034640001~ Putative Protein TRANSPARENT TESTA 12~ TT12~ complete;original_location=complement(join(3676409..3676513%2C3675636..3676177%2C3674953..3675039%2C3674684..3674740%2C3674096..3674334%2C3673784..3673902%2C3671652..3671777));owner=coffea | |
| 39883 chr10 manual_curation exon 5389425 5389550 . + . Parent=GSCOCT00034640001 | |
| 39884 chr10 manual_curation exon 5387300 5387418 . + . Parent=GSCOCT00034640001 | |
| 39885 chr10 manual_curation exon 5386868 5387106 . + . Parent=GSCOCT00034640001 | |
| 39886 chr10 manual_curation exon 5386462 5386518 . + . Parent=GSCOCT00034640001 | |
| 39887 chr10 manual_curation exon 5386163 5386249 . + . Parent=GSCOCT00034640001 | |
| 39888 chr10 manual_curation exon 5385025 5385566 . + . Parent=GSCOCT00034640001 | |
| 39889 chr10 manual_curation exon 5384689 5384793 . + . Parent=GSCOCT00034640001 | |
| 39890 chr10 manual_curation CDS 5389425 5389550 . + 0 Parent=GSCOCT00034640001 | |
| 39891 chr10 manual_curation CDS 5387300 5387418 . + 1 Parent=GSCOCT00034640001 | |
| 39892 chr10 manual_curation CDS 5386868 5387106 . + 2 Parent=GSCOCT00034640001 | |
| 39893 chr10 manual_curation CDS 5386462 5386518 . + 2 Parent=GSCOCT00034640001 | |
| 39894 chr10 manual_curation CDS 5386163 5386249 . + 2 Parent=GSCOCT00034640001 | |
| 39895 chr10 manual_curation CDS 5385025 5385566 . + 0 Parent=GSCOCT00034640001 | |
| 39896 chr10 manual_curation CDS 5384689 5384793 . + 0 Parent=GSCOCT00034640001 | |
| 39897 chr10 manual_curation gene 5395701 5402338 . + . ID=GSCOCG00034639001;Name=Cc10_g06550 | |
| 39898 chr10 manual_curation mRNA 5395701 5402338 . + . ID=GSCOCT00034639001;Parent=GSCOCG00034639001;Name=Cc10_g06550 | |
| 39899 chr10 manual_curation polypeptide 5395701 5402338 . + . ID=GSCOCP00034639001;Dbxref=InterPro:IPR002528,PANTHER:PTHR11206,PFAM:PF01554,SwissProt:Q8GXM8,SwissProt:Q9LYT3,SwissProt:Q9SIA5,TAIR:AT5G10420.1,TAIR:AT5G44050.1,TAIR:AT5G65380.1,TIGRFAMs:TIGR00797,TrEMBL:B9GV15,TrEMBL:F6H0Y9,TrEMBL:I1JVA1;Derives_from=GSCOCT00034639001;Name=Cc10_g06550;Ontology_term=CC_evidence_code:ISS,GO:0006855,GO:0015238,GO:0015297,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein TRANSPARENT TESTA 12,CC_functional_completeness:complete,CC_gene:TT12,CC_gene:DTX1,CC_gene:DTXL3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034639001~ Putative Protein TRANSPARENT TESTA 12~ TT12~ complete;original_location=complement(join(3665202..3665501%2C3664107..3664648%2C3663922..3664008%2C3663654..3663710%2C3662538..3662776%2C3662300..3662418%2C3659024..3659113%2C3658864..3658926));owner=coffea | |
| 39900 chr10 manual_curation exon 5402276 5402338 . + . Parent=GSCOCT00034639001 | |
| 39901 chr10 manual_curation exon 5402089 5402178 . + . Parent=GSCOCT00034639001 | |
| 39902 chr10 manual_curation exon 5398784 5398902 . + . Parent=GSCOCT00034639001 | |
| 39903 chr10 manual_curation exon 5398426 5398664 . + . Parent=GSCOCT00034639001 | |
| 39904 chr10 manual_curation exon 5397492 5397548 . + . Parent=GSCOCT00034639001 | |
| 39905 chr10 manual_curation exon 5397194 5397280 . + . Parent=GSCOCT00034639001 | |
| 39906 chr10 manual_curation exon 5396554 5397095 . + . Parent=GSCOCT00034639001 | |
| 39907 chr10 manual_curation exon 5395701 5396000 . + . Parent=GSCOCT00034639001 | |
| 39908 chr10 manual_curation CDS 5402276 5402338 . + 0 Parent=GSCOCT00034639001 | |
| 39909 chr10 manual_curation CDS 5402089 5402178 . + 0 Parent=GSCOCT00034639001 | |
| 39910 chr10 manual_curation CDS 5398784 5398902 . + 1 Parent=GSCOCT00034639001 | |
| 39911 chr10 manual_curation CDS 5398426 5398664 . + 2 Parent=GSCOCT00034639001 | |
| 39912 chr10 manual_curation CDS 5397492 5397548 . + 2 Parent=GSCOCT00034639001 | |
| 39913 chr10 manual_curation CDS 5397194 5397280 . + 2 Parent=GSCOCT00034639001 | |
| 39914 chr10 manual_curation CDS 5396554 5397095 . + 0 Parent=GSCOCT00034639001 | |
| 39915 chr10 manual_curation CDS 5395701 5396000 . + 0 Parent=GSCOCT00034639001 | |
| 39916 chr10 manual_curation gene 5406032 5408203 . - . ID=GSCOCG00034638001;Name=Cc10_g06560 | |
| 39917 chr10 manual_curation mRNA 5406032 5408203 . - . ID=GSCOCT00034638001;Parent=GSCOCG00034638001;Name=Cc10_g06560 | |
| 39918 chr10 manual_curation polypeptide 5407038 5408105 . - . ID=GSCOCP00034638001;Dbxref=GENE3D:G3DSA:1.25.40.90,InterPro:IPR008942,InterPro:IPR011417,InterPro:IPR013809,PFAM:PF07651,PROFILE:PS50942,SUPERFAMILY:SSF48464,SwissProt:Q8H0W9,SwissProt:Q8L936,SwissProt:Q9FKQ2,TAIR:AT4G40080.1,TAIR:AT5G10410.1,TAIR:AT5G65370.1,TrEMBL:B9H6Z0,TrEMBL:B9RJR9,TrEMBL:F6H0Y8;Derives_from=GSCOCT00034638001;Name=Cc10_g06560;Ontology_term=CC_evidence_code:ISS,GO:0005543,CC_EC_number:missing_EC_number,PRODUCT:Putative clathrin assembly protein At4g40080,CC_functional_completeness:complete,CC_gene:At4g40080,CC_gene:At5g10410,CC_gene:At5g65370;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034638001~ Putative clathrin assembly protein At4g40080~ At4g40080~ complete;original_location=3653097..3654164;owner=coffea | |
| 39919 chr10 manual_curation exon 5406032 5408203 . - . Parent=GSCOCT00034638001 | |
| 39920 chr10 manual_curation CDS 5407038 5408105 . - 0 Parent=GSCOCT00034638001 | |
| 39921 chr10 manual_curation gene 5411897 5413195 . - . ID=GSCOCG00034637001;Name=Cc10_g06570 | |
| 39922 chr10 manual_curation mRNA 5411897 5413195 . - . ID=GSCOCT00034637001;Parent=GSCOCG00034637001;Name=Cc10_g06570 | |
| 39923 chr10 manual_curation polypeptide 5411897 5413195 . - . ID=GSCOCP00034637001;Dbxref=InterPro:IPR001841,InterPro:IPR018957,PFAM:PF00097,PROFILE:PS50089,SMART:SM00184,SwissProt:Q84W40,SwissProt:Q8RXX9,SwissProt:Q9SK92,TAIR:AT1G22500.1,TAIR:AT1G72200.1,TAIR:AT3G05200.1,TrEMBL:B9H6Z2,TrEMBL:B9RJR7,TrEMBL:F6H0Y6;Derives_from=GSCOCT00034637001;Name=Cc10_g06570;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative E3 ubiquitin-protein ligase ATL15,CC_functional_completeness:complete,CC_gene:ATL15,CC_gene:ATL11,CC_gene:ATL6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034637001~ Putative E3 ubiquitin-protein ligase ATL15~ ATL15~ complete;original_location=3648007..3649305;owner=coffea | |
| 39924 chr10 manual_curation exon 5411897 5413195 . - . Parent=GSCOCT00034637001 | |
| 39925 chr10 manual_curation CDS 5411897 5413195 . - 0 Parent=GSCOCT00034637001 | |
| 39926 chr10 manual_curation gene 5425038 5427338 . + . ID=GSCOCG00034636001;Name=Cc10_g06580 | |
| 39927 chr10 manual_curation mRNA 5425038 5427338 . + . ID=GSCOCT00034636001;Parent=GSCOCG00034636001;Name=Cc10_g06580 | |
| 39928 chr10 manual_curation polypeptide 5425229 5426941 . + . ID=GSCOCP00034636001;Dbxref=GENE3D:G3DSA:4.10.280.10,InterPro:IPR001092,InterPro:IPR011598,PFAM:PF00010,PROFILE:PS50888,SMART:SM00353,SUPERFAMILY:SSF47459,SwissProt:Q56YJ8,SwissProt:Q9C7T4,SwissProt:Q9SK91,TAIR:AT1G22490.1,TAIR:AT1G72210.1,TAIR:AT3G24140.1,TrEMBL:D9ZIP5,TrEMBL:E0CRQ8,TrEMBL:I1MAX1;Derives_from=GSCOCT00034636001;Name=Cc10_g06580;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0030528,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative Transcription factor bHLH96,CC_functional_completeness:complete,CC_gene:BHLH96,CC_gene:BHLH94,CC_gene:FMA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034636001~ Putative Transcription factor bHLH96~ BHLH96~ complete;original_location=complement(join(3635464..3635973%2C3634546..3635007%2C3634261..3634350));owner=coffea | |
| 39929 chr10 manual_curation exon 5426852 5427338 . + . Parent=GSCOCT00034636001 | |
| 39930 chr10 manual_curation exon 5426195 5426656 . + . Parent=GSCOCT00034636001 | |
| 39931 chr10 manual_curation exon 5425038 5425738 . + . Parent=GSCOCT00034636001 | |
| 39932 chr10 manual_curation CDS 5426852 5426941 . + 0 Parent=GSCOCT00034636001 | |
| 39933 chr10 manual_curation CDS 5426195 5426656 . + 0 Parent=GSCOCT00034636001 | |
| 39934 chr10 manual_curation CDS 5425229 5425738 . + 0 Parent=GSCOCT00034636001 | |
| 39935 chr10 manual_curation gene 5434164 5435982 . - . ID=GSCOCG00034635001;Name=Cc10_g06590 | |
| 39936 chr10 manual_curation mRNA 5434164 5435982 . - . ID=GSCOCT00034635001;Parent=GSCOCG00034635001;Name=Cc10_g06590 | |
| 39937 chr10 manual_curation polypeptide 5434546 5435733 . - . ID=GSCOCP00034635001;Dbxref=InterPro:IPR001841,InterPro:IPR018957,PFAM:PF00097,PROFILE:PS50089,SMART:SM00184,SwissProt:P0C041,SwissProt:Q8LFY8,SwissProt:Q9SRQ8,TAIR:AT1G72220.1,TAIR:AT3G03550.1,TAIR:AT4G33565.1,TrEMBL:A5BMY3,TrEMBL:B9GV12,TrEMBL:B9RJR5;Derives_from=GSCOCT00034635001;Name=Cc10_g06590;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Ring finger protein%2C putative,CC_functional_completeness:complete,CC_gene:ATL54,CC_gene:ATL51,CC_gene:ATL53;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034635001~ Ring finger protein%2C putative~ ATL54~ complete;original_location=3625469..3626656;owner=coffea | |
| 39938 chr10 manual_curation exon 5434164 5435982 . - . Parent=GSCOCT00034635001 | |
| 39939 chr10 manual_curation CDS 5434546 5435733 . - 0 Parent=GSCOCT00034635001 | |
| 39940 chr10 manual_curation gene 5441788 5442509 . + . ID=GSCOCG00034634001;Name=Cc10_g06600 | |
| 39941 chr10 manual_curation mRNA 5441788 5442509 . + . ID=GSCOCT00034634001;Parent=GSCOCG00034634001;Name=Cc10_g06600 | |
| 39942 chr10 manual_curation polypeptide 5441905 5442509 . + . ID=GSCOCP00034634001;Derives_from=GSCOCT00034634001;Name=Cc10_g06600;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034634001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(3619252..3619297%2C3619116..3619195%2C3618922..3618993%2C3618693..3618746));owner=coffea | |
| 39943 chr10 manual_curation exon 5442456 5442509 . + . Parent=GSCOCT00034634001 | |
| 39944 chr10 manual_curation exon 5442209 5442280 . + . Parent=GSCOCT00034634001 | |
| 39945 chr10 manual_curation exon 5442007 5442086 . + . Parent=GSCOCT00034634001 | |
| 39946 chr10 manual_curation exon 5441788 5441950 . + . Parent=GSCOCT00034634001 | |
| 39947 chr10 manual_curation CDS 5442456 5442509 . + 0 Parent=GSCOCT00034634001 | |
| 39948 chr10 manual_curation CDS 5442209 5442280 . + 0 Parent=GSCOCT00034634001 | |
| 39949 chr10 manual_curation CDS 5442007 5442086 . + 1 Parent=GSCOCT00034634001 | |
| 39950 chr10 manual_curation CDS 5441905 5441950 . + 0 Parent=GSCOCT00034634001 | |
| 39951 chr10 manual_curation gene 5442628 5443777 . + . ID=GSCOCG00034633001;Name=Cc10_g06610 | |
| 39952 chr10 manual_curation mRNA 5442628 5443777 . + . ID=GSCOCT00034633001;Parent=GSCOCG00034633001;Name=Cc10_g06610 | |
| 39953 chr10 manual_curation polypeptide 5442628 5443537 . + . ID=GSCOCP00034633001;Derives_from=GSCOCT00034633001;Name=Cc10_g06610;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034633001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(3618344..3618574%2C3617665..3617769));owner=coffea | |
| 39954 chr10 manual_curation exon 5443433 5443777 . + . Parent=GSCOCT00034633001 | |
| 39955 chr10 manual_curation exon 5442628 5442858 . + . Parent=GSCOCT00034633001 | |
| 39956 chr10 manual_curation CDS 5443433 5443537 . + 0 Parent=GSCOCT00034633001 | |
| 39957 chr10 manual_curation CDS 5442628 5442858 . + 0 Parent=GSCOCT00034633001 | |
| 39958 chr10 manual_curation gene 5455330 5455787 . - . ID=GSCOCG00034631001;Name=Cc10_g06620 | |
| 39959 chr10 manual_curation mRNA 5455330 5455787 . - . ID=GSCOCT00034631001;Parent=GSCOCG00034631001;Name=Cc10_g06620 | |
| 39960 chr10 manual_curation polypeptide 5455330 5455787 . - . ID=GSCOCP00034631001;Dbxref=GENE3D:G3DSA:3.20.20.330,InterPro:IPR003726,PFAM:PF02574,SUPERFAMILY:SSF82282,SwissProt:Q4VNK0,SwissProt:Q9FUM7,SwissProt:Q9M1W4,TAIR:AT3G22740.1,TAIR:AT3G25900.1,TAIR:AT3G63250.1,TrEMBL:A5CB34,TrEMBL:B9H8B8,TrEMBL:F6HI62;Derives_from=GSCOCT00034631001;Name=Cc10_g06620;Ontology_term=CC_evidence_code:ISS,GO:0008898,CC_EC_number:2.1.1.10,PRODUCT:Selenocysteine Se-methyltransferase,CC_functional_completeness:fragment,CC_gene:SMT,CC_gene:HMT-2,CC_gene:HMT-4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034631001~ Selenocysteine Se-methyltransferase~ SMT~ fragment;original_location=join(3605415..3605555%2C3605663..3605872);owner=coffea | |
| 39961 chr10 manual_curation exon 5455647 5455787 . - . Parent=GSCOCT00034631001 | |
| 39962 chr10 manual_curation exon 5455330 5455539 . - . Parent=GSCOCT00034631001 | |
| 39963 chr10 manual_curation CDS 5455647 5455787 . - 0 Parent=GSCOCT00034631001 | |
| 39964 chr10 manual_curation CDS 5455330 5455539 . - 0 Parent=GSCOCT00034631001 | |
| 39965 chr10 manual_curation gene 5493709 5494770 . - . ID=GSCOCG00034630001;Name=Cc10_g06630 | |
| 39966 chr10 manual_curation mRNA 5493709 5494770 . - . ID=GSCOCT00034630001;Parent=GSCOCG00034630001;Name=Cc10_g06630 | |
| 39967 chr10 manual_curation polypeptide 5494211 5494639 . - . ID=GSCOCP00034630001;Derives_from=GSCOCT00034630001;Name=Cc10_g06630;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034630001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=3566563..3566991;owner=coffea | |
| 39968 chr10 manual_curation exon 5493709 5494770 . - . Parent=GSCOCT00034630001 | |
| 39969 chr10 manual_curation CDS 5494211 5494639 . - 0 Parent=GSCOCT00034630001 | |
| 39970 chr10 manual_curation gene 5498423 5513557 . - . ID=GSCOCG00034629001;Name=Cc10_g06640 | |
| 39971 chr10 manual_curation mRNA 5498423 5513557 . - . ID=GSCOCT00034629001;Parent=GSCOCG00034629001;Name=Cc10_g06640 | |
| 39972 chr10 manual_curation polypeptide 5499425 5513399 . - . ID=GSCOCP00034629001;Dbxref=GENE3D:G3DSA:2.60.40.10,GENE3D:G3DSA:2.60.40.1180,GENE3D:G3DSA:3.20.20.80,InterPro:IPR004193,InterPro:IPR006047,InterPro:IPR006048,InterPro:IPR006589,InterPro:IPR013780,InterPro:IPR013781,InterPro:IPR013783,InterPro:IPR014756,InterPro:IPR017853,PFAM:PF00128,PFAM:PF02806,PFAM:PF02922,SMART:SM00642,SUPERFAMILY:SSF51445,SUPERFAMILY:SSF81296,SwissProt:O04196,SwissProt:P0A4Y4,SwissProt:Q9M0S5,TAIR:AT1G03310.2,TAIR:AT2G39930.1,TAIR:AT4G09020.1,TrEMBL:A4PIT0,TrEMBL:B9RJQ8,TrEMBL:E0CRQ1;Derives_from=GSCOCT00034629001;Name=Cc10_g06640;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0043169,CC_EC_number:3.2.1.68,PRODUCT:Isoamylase 3%2C chloroplastic,CC_functional_completeness:complete,CC_gene:ISA3,CC_gene:ISA1,CC_gene:glgX;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034629001~ Isoamylase 3%2C chloroplastic~ ISA3~ complete;original_location=join(3547803..3547906%2C3548039..3548096%2C3548202..3548279%2C3548487..3548644%2C3549239..3549335%2C3549901..3550137%2C3550472..3550576%2C3550956..3551060%2C3551600..3551734%2C3551859..3551945%2C3552402..3552459%2C3553400..3553463%2C3553678..3553777%2C3554148..3554248%2C3554821..3554872%2C3556170..3556232%2C3556383..3556472%2C3556555..3556627%2C3557262..3557341%2C3558993..3559097%2C3559180..3559275%2C3560202..3560263%2C3560875..3560983%2C3561661..3561777);owner=coffea | |
| 39973 chr10 manual_curation exon 5513296 5513557 . - . Parent=GSCOCT00034629001 | |
| 39974 chr10 manual_curation exon 5513106 5513163 . - . Parent=GSCOCT00034629001 | |
| 39975 chr10 manual_curation exon 5512923 5513000 . - . Parent=GSCOCT00034629001 | |
| 39976 chr10 manual_curation exon 5512558 5512715 . - . Parent=GSCOCT00034629001 | |
| 39977 chr10 manual_curation exon 5511867 5511963 . - . Parent=GSCOCT00034629001 | |
| 39978 chr10 manual_curation exon 5511065 5511301 . - . Parent=GSCOCT00034629001 | |
| 39979 chr10 manual_curation exon 5510626 5510730 . - . Parent=GSCOCT00034629001 | |
| 39980 chr10 manual_curation exon 5510142 5510246 . - . Parent=GSCOCT00034629001 | |
| 39981 chr10 manual_curation exon 5509468 5509602 . - . Parent=GSCOCT00034629001 | |
| 39982 chr10 manual_curation exon 5509257 5509343 . - . Parent=GSCOCT00034629001 | |
| 39983 chr10 manual_curation exon 5508743 5508800 . - . Parent=GSCOCT00034629001 | |
| 39984 chr10 manual_curation exon 5507739 5507802 . - . Parent=GSCOCT00034629001 | |
| 39985 chr10 manual_curation exon 5507425 5507524 . - . Parent=GSCOCT00034629001 | |
| 39986 chr10 manual_curation exon 5506954 5507054 . - . Parent=GSCOCT00034629001 | |
| 39987 chr10 manual_curation exon 5506330 5506381 . - . Parent=GSCOCT00034629001 | |
| 39988 chr10 manual_curation exon 5504970 5505032 . - . Parent=GSCOCT00034629001 | |
| 39989 chr10 manual_curation exon 5504730 5504819 . - . Parent=GSCOCT00034629001 | |
| 39990 chr10 manual_curation exon 5504575 5504647 . - . Parent=GSCOCT00034629001 | |
| 39991 chr10 manual_curation exon 5503861 5503940 . - . Parent=GSCOCT00034629001 | |
| 39992 chr10 manual_curation exon 5502105 5502209 . - . Parent=GSCOCT00034629001 | |
| 39993 chr10 manual_curation exon 5501927 5502022 . - . Parent=GSCOCT00034629001 | |
| 39994 chr10 manual_curation exon 5500939 5501000 . - . Parent=GSCOCT00034629001 | |
| 39995 chr10 manual_curation exon 5500219 5500327 . - . Parent=GSCOCT00034629001 | |
| 39996 chr10 manual_curation exon 5498423 5499541 . - . Parent=GSCOCT00034629001 | |
| 39997 chr10 manual_curation CDS 5513296 5513399 . - 0 Parent=GSCOCT00034629001 | |
| 39998 chr10 manual_curation CDS 5513106 5513163 . - 2 Parent=GSCOCT00034629001 | |
| 39999 chr10 manual_curation CDS 5512923 5513000 . - 0 Parent=GSCOCT00034629001 | |
| 40000 chr10 manual_curation CDS 5512558 5512715 . - 0 Parent=GSCOCT00034629001 | |
| 40001 chr10 manual_curation CDS 5511867 5511963 . - 2 Parent=GSCOCT00034629001 | |
| 40002 chr10 manual_curation CDS 5511065 5511301 . - 0 Parent=GSCOCT00034629001 | |
| 40003 chr10 manual_curation CDS 5510626 5510730 . - 0 Parent=GSCOCT00034629001 | |
| 40004 chr10 manual_curation CDS 5510142 5510246 . - 0 Parent=GSCOCT00034629001 | |
| 40005 chr10 manual_curation CDS 5509468 5509602 . - 0 Parent=GSCOCT00034629001 | |
| 40006 chr10 manual_curation CDS 5509257 5509343 . - 0 Parent=GSCOCT00034629001 | |
| 40007 chr10 manual_curation CDS 5508743 5508800 . - 0 Parent=GSCOCT00034629001 | |
| 40008 chr10 manual_curation CDS 5507739 5507802 . - 1 Parent=GSCOCT00034629001 | |
| 40009 chr10 manual_curation CDS 5507425 5507524 . - 2 Parent=GSCOCT00034629001 | |
| 40010 chr10 manual_curation CDS 5506954 5507054 . - 0 Parent=GSCOCT00034629001 | |
| 40011 chr10 manual_curation CDS 5506330 5506381 . - 2 Parent=GSCOCT00034629001 | |
| 40012 chr10 manual_curation CDS 5504970 5505032 . - 0 Parent=GSCOCT00034629001 | |
| 40013 chr10 manual_curation CDS 5504730 5504819 . - 0 Parent=GSCOCT00034629001 | |
| 40014 chr10 manual_curation CDS 5504575 5504647 . - 0 Parent=GSCOCT00034629001 | |
| 40015 chr10 manual_curation CDS 5503861 5503940 . - 1 Parent=GSCOCT00034629001 | |
| 40016 chr10 manual_curation CDS 5502105 5502209 . - 0 Parent=GSCOCT00034629001 | |
| 40017 chr10 manual_curation CDS 5501927 5502022 . - 0 Parent=GSCOCT00034629001 | |
| 40018 chr10 manual_curation CDS 5500939 5501000 . - 0 Parent=GSCOCT00034629001 | |
| 40019 chr10 manual_curation CDS 5500219 5500327 . - 2 Parent=GSCOCT00034629001 | |
| 40020 chr10 manual_curation CDS 5499425 5499541 . - 0 Parent=GSCOCT00034629001 | |
| 40021 chr10 manual_curation gene 5515194 5516705 . - . ID=GSCOCG00034628001;Name=Cc10_g06650 | |
| 40022 chr10 manual_curation mRNA 5515194 5516705 . - . ID=GSCOCT00034628001;Parent=GSCOCG00034628001;Name=Cc10_g06650 | |
| 40023 chr10 manual_curation polypeptide 5515244 5516705 . - . ID=GSCOCP00034628001;Derives_from=GSCOCT00034628001;Name=Cc10_g06650;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034628001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(3544497..3544571%2C3545815..3545958);owner=coffea | |
| 40024 chr10 manual_curation exon 5516631 5516705 . - . Parent=GSCOCT00034628001 | |
| 40025 chr10 manual_curation exon 5515194 5515387 . - . Parent=GSCOCT00034628001 | |
| 40026 chr10 manual_curation CDS 5516631 5516705 . - 0 Parent=GSCOCT00034628001 | |
| 40027 chr10 manual_curation CDS 5515244 5515387 . - 0 Parent=GSCOCT00034628001 | |
| 40028 chr10 manual_curation gene 5516786 5526778 . - . ID=GSCOCG00034627001;Name=Cc10_g06660 | |
| 40029 chr10 manual_curation mRNA 5516786 5526778 . - . ID=GSCOCT00034627001;Parent=GSCOCG00034627001;Name=Cc10_g06660 | |
| 40030 chr10 manual_curation polypeptide 5516786 5526497 . - . ID=GSCOCP00034627001;Dbxref=SwissProt:Q3UVG3,SwissProt:Q658Y4,SwissProt:Q6TEP1,TAIR:AT1G35220.1,TrEMBL:B9RJQ7,TrEMBL:D7KL48,TrEMBL:F6H0Y0;Derives_from=GSCOCT00034627001;Name=Cc10_g06660;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein FAM91A1,CC_functional_completeness:modules,CC_gene:Fam91a1,CC_gene:FAM91A1,CC_gene:fam91a1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034627001~ Putative Protein FAM91A1~ Fam91a1~ modules;original_location=join(3534705..3534832%2C3536155..3536272%2C3536917..3537013%2C3538023..3538129%2C3539783..3539905%2C3540085..3540238%2C3541298..3541358%2C3541464..3541837%2C3541928..3543530%2C3544170..3544416);owner=coffea | |
| 40031 chr10 manual_curation exon 5526688 5526778 . - . Parent=GSCOCT00034627001 | |
| 40032 chr10 manual_curation exon 5526370 5526555 . - . Parent=GSCOCT00034627001 | |
| 40033 chr10 manual_curation exon 5524930 5525047 . - . Parent=GSCOCT00034627001 | |
| 40034 chr10 manual_curation exon 5524189 5524285 . - . Parent=GSCOCT00034627001 | |
| 40035 chr10 manual_curation exon 5523073 5523179 . - . Parent=GSCOCT00034627001 | |
| 40036 chr10 manual_curation exon 5521297 5521419 . - . Parent=GSCOCT00034627001 | |
| 40037 chr10 manual_curation exon 5520964 5521117 . - . Parent=GSCOCT00034627001 | |
| 40038 chr10 manual_curation exon 5519844 5519904 . - . Parent=GSCOCT00034627001 | |
| 40039 chr10 manual_curation exon 5519365 5519738 . - . Parent=GSCOCT00034627001 | |
| 40040 chr10 manual_curation exon 5517672 5519274 . - . Parent=GSCOCT00034627001 | |
| 40041 chr10 manual_curation exon 5516786 5517032 . - . Parent=GSCOCT00034627001 | |
| 40042 chr10 manual_curation CDS 5526370 5526497 . - 0 Parent=GSCOCT00034627001 | |
| 40043 chr10 manual_curation CDS 5524930 5525047 . - 2 Parent=GSCOCT00034627001 | |
| 40044 chr10 manual_curation CDS 5524189 5524285 . - 0 Parent=GSCOCT00034627001 | |
| 40045 chr10 manual_curation CDS 5523073 5523179 . - 1 Parent=GSCOCT00034627001 | |
| 40046 chr10 manual_curation CDS 5521297 5521419 . - 0 Parent=GSCOCT00034627001 | |
| 40047 chr10 manual_curation CDS 5520964 5521117 . - 0 Parent=GSCOCT00034627001 | |
| 40048 chr10 manual_curation CDS 5519844 5519904 . - 1 Parent=GSCOCT00034627001 | |
| 40049 chr10 manual_curation CDS 5519365 5519738 . - 2 Parent=GSCOCT00034627001 | |
| 40050 chr10 manual_curation CDS 5517672 5519274 . - 1 Parent=GSCOCT00034627001 | |
| 40051 chr10 manual_curation CDS 5516786 5517032 . - 2 Parent=GSCOCT00034627001 | |
| 40052 chr10 manual_curation gene 5528023 5528381 . + . ID=GSCOCG00034626001;Name=Cc10_g06670 | |
| 40053 chr10 manual_curation mRNA 5528023 5528381 . + . ID=GSCOCT00034626001;Parent=GSCOCG00034626001;Name=Cc10_g06670 | |
| 40054 chr10 manual_curation polypeptide 5528023 5528381 . + . ID=GSCOCP00034626001;Derives_from=GSCOCT00034626001;Name=Cc10_g06670;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034626001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(3532971..3533179%2C3532821..3532869));owner=coffea | |
| 40055 chr10 manual_curation exon 5528333 5528381 . + . Parent=GSCOCT00034626001 | |
| 40056 chr10 manual_curation exon 5528023 5528231 . + . Parent=GSCOCT00034626001 | |
| 40057 chr10 manual_curation CDS 5528333 5528381 . + 2 Parent=GSCOCT00034626001 | |
| 40058 chr10 manual_curation CDS 5528023 5528231 . + 0 Parent=GSCOCT00034626001 | |
| 40059 chr10 manual_curation gene 5529110 5535519 . + . ID=GSCOCG00034625001;Name=Cc10_g06680 | |
| 40060 chr10 manual_curation mRNA 5529110 5535519 . + . ID=GSCOCT00034625001;Parent=GSCOCG00034625001;Name=Cc10_g06680 | |
| 40061 chr10 manual_curation polypeptide 5529110 5535158 . + . ID=GSCOCP00034625001;Dbxref=GENE3D:G3DSA:3.20.20.105,HAMAP:MF_00168,InterPro:IPR002616,InterPro:IPR004803,PANTHER:PTHR11962,PFAM:PF01702,SUPERFAMILY:SSF51713,SwissProt:Q28HC6,SwissProt:Q4QQY7,SwissProt:Q4QR99,TIGRFAMs:TIGR00430,TIGRFAMs:TIGR00449,TrEMBL:B9GV00,TrEMBL:B9RJQ2,TrEMBL:E0CRP9;Derives_from=GSCOCT00034625001;Name=Cc10_g06680;Ontology_term=CC_evidence_code:ISS,GO:0006400,GO:0008033,GO:0008479,GO:0008616,CC_EC_number:2.4.2.29,PRODUCT:Queuine tRNA-ribosyltransferase,CC_functional_completeness:complete,CC_gene:qtrt1,CC_gene:Qtrt1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034625001~ Queuine tRNA-ribosyltransferase~ qtrt1~ complete;original_location=complement(join(3531960..3532092%2C3531348..3531526%2C3530968..3531018%2C3530484..3530540%2C3529808..3529928%2C3529284..3529350%2C3529130..3529171%2C3528624..3528729%2C3528414..3528524%2C3527329..3527400%2C3527153..3527254%2C3527019..3527065%2C3526803..3526830%2C3526044..3526136));owner=coffea | |
| 40062 chr10 manual_curation exon 5535066 5535519 . + . Parent=GSCOCT00034625001 | |
| 40063 chr10 manual_curation exon 5534372 5534399 . + . Parent=GSCOCT00034625001 | |
| 40064 chr10 manual_curation exon 5534137 5534183 . + . Parent=GSCOCT00034625001 | |
| 40065 chr10 manual_curation exon 5533948 5534049 . + . Parent=GSCOCT00034625001 | |
| 40066 chr10 manual_curation exon 5533802 5533873 . + . Parent=GSCOCT00034625001 | |
| 40067 chr10 manual_curation exon 5532678 5532788 . + . Parent=GSCOCT00034625001 | |
| 40068 chr10 manual_curation exon 5532473 5532578 . + . Parent=GSCOCT00034625001 | |
| 40069 chr10 manual_curation exon 5532031 5532072 . + . Parent=GSCOCT00034625001 | |
| 40070 chr10 manual_curation exon 5531852 5531918 . + . Parent=GSCOCT00034625001 | |
| 40071 chr10 manual_curation exon 5531274 5531394 . + . Parent=GSCOCT00034625001 | |
| 40072 chr10 manual_curation exon 5530662 5530718 . + . Parent=GSCOCT00034625001 | |
| 40073 chr10 manual_curation exon 5530184 5530234 . + . Parent=GSCOCT00034625001 | |
| 40074 chr10 manual_curation exon 5529676 5529854 . + . Parent=GSCOCT00034625001 | |
| 40075 chr10 manual_curation exon 5529110 5529242 . + . Parent=GSCOCT00034625001 | |
| 40076 chr10 manual_curation CDS 5535066 5535158 . + 0 Parent=GSCOCT00034625001 | |
| 40077 chr10 manual_curation CDS 5534372 5534399 . + 2 Parent=GSCOCT00034625001 | |
| 40078 chr10 manual_curation CDS 5534137 5534183 . + 0 Parent=GSCOCT00034625001 | |
| 40079 chr10 manual_curation CDS 5533948 5534049 . + 0 Parent=GSCOCT00034625001 | |
| 40080 chr10 manual_curation CDS 5533802 5533873 . + 0 Parent=GSCOCT00034625001 | |
| 40081 chr10 manual_curation CDS 5532678 5532788 . + 0 Parent=GSCOCT00034625001 | |
| 40082 chr10 manual_curation CDS 5532473 5532578 . + 2 Parent=GSCOCT00034625001 | |
| 40083 chr10 manual_curation CDS 5532031 5532072 . + 2 Parent=GSCOCT00034625001 | |
| 40084 chr10 manual_curation CDS 5531852 5531918 . + 1 Parent=GSCOCT00034625001 | |
| 40085 chr10 manual_curation CDS 5531274 5531394 . + 0 Parent=GSCOCT00034625001 | |
| 40086 chr10 manual_curation CDS 5530662 5530718 . + 0 Parent=GSCOCT00034625001 | |
| 40087 chr10 manual_curation CDS 5530184 5530234 . + 0 Parent=GSCOCT00034625001 | |
| 40088 chr10 manual_curation CDS 5529676 5529854 . + 1 Parent=GSCOCT00034625001 | |
| 40089 chr10 manual_curation CDS 5529110 5529242 . + 0 Parent=GSCOCT00034625001 | |
| 40090 chr10 manual_curation gene 5540188 5542162 . + . ID=GSCOCG00034624001;Name=Cc10_g06690 | |
| 40091 chr10 manual_curation mRNA 5540188 5542162 . + . ID=GSCOCT00034624001;Parent=GSCOCG00034624001;Name=Cc10_g06690 | |
| 40092 chr10 manual_curation polypeptide 5540542 5541947 . + . ID=GSCOCP00034624001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR000047,InterPro:IPR001356,InterPro:IPR003106,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR017970,PFAM:PF00046,PFAM:PF02183,PRINTS:PR00031,PROFILE:PS50071,PROSITE:PS00027,SMART:SM00389,SUPERFAMILY:SSF46689,SwissProt:P46667,SwissProt:Q6Z248,SwissProt:Q940J1,TAIR:AT2G22430.1,TAIR:AT4G40060.1,TAIR:AT5G65310.1,TrEMBL:F6H0X8,TrEMBL:F6HRP5,TrEMBL:Q9LWB0;Derives_from=GSCOCT00034624001;Name=Cc10_g06690;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,GO:0005634,GO:0030528,GO:0043565,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative Homeobox-leucine zipper protein ATHB-16,CC_functional_completeness:complete,CC_gene:ATHB-16,CC_gene:ATHB-5,CC_gene:HOX20;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034624001~ Putative Homeobox-leucine zipper protein ATHB-16~ ATHB-16~ complete;original_location=complement(join(3520630..3520660%2C3519951..3520321%2C3519667..3519770%2C3519255..3519582));owner=coffea | |
| 40093 chr10 manual_curation exon 5541620 5542162 . + . Parent=GSCOCT00034624001 | |
| 40094 chr10 manual_curation exon 5541432 5541535 . + . Parent=GSCOCT00034624001 | |
| 40095 chr10 manual_curation exon 5540881 5541251 . + . Parent=GSCOCT00034624001 | |
| 40096 chr10 manual_curation exon 5540188 5540572 . + . Parent=GSCOCT00034624001 | |
| 40097 chr10 manual_curation CDS 5541620 5541947 . + 2 Parent=GSCOCT00034624001 | |
| 40098 chr10 manual_curation CDS 5541432 5541535 . + 0 Parent=GSCOCT00034624001 | |
| 40099 chr10 manual_curation CDS 5540881 5541251 . + 1 Parent=GSCOCT00034624001 | |
| 40100 chr10 manual_curation CDS 5540542 5540572 . + 0 Parent=GSCOCT00034624001 | |
| 40101 chr10 manual_curation gene 5546697 5547209 . + . ID=GSCOCG00034623001;Name=Cc10_g06700 | |
| 40102 chr10 manual_curation mRNA 5546697 5547209 . + . ID=GSCOCT00034623001;Parent=GSCOCG00034623001;Name=Cc10_g06700 | |
| 40103 chr10 manual_curation polypeptide 5546697 5547209 . + . ID=GSCOCP00034623001;Dbxref=InterPro:IPR008004,PFAM:PF05340,TrEMBL:A5AXC1,TrEMBL:B9RJP5,TrEMBL:F6H0X5;Derives_from=GSCOCT00034623001;Name=Cc10_g06700;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034623001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=complement(3513993..3514505);owner=coffea | |
| 40104 chr10 manual_curation exon 5546697 5547209 . + . Parent=GSCOCT00034623001 | |
| 40105 chr10 manual_curation CDS 5546697 5547209 . + 0 Parent=GSCOCT00034623001 | |
| 40106 chr10 manual_curation gene 5561193 5566194 . + . ID=GSCOCG00034620001;Name=Cc10_g06710 | |
| 40107 chr10 manual_curation mRNA 5561193 5566194 . + . ID=GSCOCT00034620001;Parent=GSCOCG00034620001;Name=Cc10_g06710 | |
| 40108 chr10 manual_curation polypeptide 5561387 5565772 . + . ID=GSCOCP00034620001;Dbxref=InterPro:IPR019378,PFAM:PF10250,SwissProt:Q8W486,TAIR:AT1G22460.1,TAIR:AT2G37980.1,TAIR:AT5G64600.1,TrEMBL:B9RJP4,TrEMBL:E0CRP5,TrEMBL:G7KAG9;Derives_from=GSCOCT00034620001;Name=Cc10_g06710;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative DUF246 domain-containing protein At1g04910,CC_functional_completeness:complete,CC_gene:At1g04910;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034620001~ Putative DUF246 domain-containing protein At1g04910~ At1g04910~ complete;original_location=complement(join(3499672..3499815%2C3499127..3499222%2C3498786..3498885%2C3498598..3498665%2C3497663..3497751%2C3497327..3497507%2C3497119..3497247%2C3496900..3497033%2C3496599..3496812%2C3496102..3496286%2C3495913..3496008%2C3495430..3495583));owner=coffea | |
| 40109 chr10 manual_curation exon 5565619 5566194 . + . Parent=GSCOCT00034620001 | |
| 40110 chr10 manual_curation exon 5565194 5565289 . + . Parent=GSCOCT00034620001 | |
| 40111 chr10 manual_curation exon 5564916 5565100 . + . Parent=GSCOCT00034620001 | |
| 40112 chr10 manual_curation exon 5564390 5564603 . + . Parent=GSCOCT00034620001 | |
| 40113 chr10 manual_curation exon 5564169 5564302 . + . Parent=GSCOCT00034620001 | |
| 40114 chr10 manual_curation exon 5563955 5564083 . + . Parent=GSCOCT00034620001 | |
| 40115 chr10 manual_curation exon 5563695 5563875 . + . Parent=GSCOCT00034620001 | |
| 40116 chr10 manual_curation exon 5563451 5563539 . + . Parent=GSCOCT00034620001 | |
| 40117 chr10 manual_curation exon 5562537 5562604 . + . Parent=GSCOCT00034620001 | |
| 40118 chr10 manual_curation exon 5562317 5562416 . + . Parent=GSCOCT00034620001 | |
| 40119 chr10 manual_curation exon 5561980 5562075 . + . Parent=GSCOCT00034620001 | |
| 40120 chr10 manual_curation exon 5561193 5561530 . + . Parent=GSCOCT00034620001 | |
| 40121 chr10 manual_curation CDS 5565619 5565772 . + 2 Parent=GSCOCT00034620001 | |
| 40122 chr10 manual_curation CDS 5565194 5565289 . + 2 Parent=GSCOCT00034620001 | |
| 40123 chr10 manual_curation CDS 5564916 5565100 . + 0 Parent=GSCOCT00034620001 | |
| 40124 chr10 manual_curation CDS 5564390 5564603 . + 2 Parent=GSCOCT00034620001 | |
| 40125 chr10 manual_curation CDS 5564169 5564302 . + 0 Parent=GSCOCT00034620001 | |
| 40126 chr10 manual_curation CDS 5563955 5564083 . + 0 Parent=GSCOCT00034620001 | |
| 40127 chr10 manual_curation CDS 5563695 5563875 . + 2 Parent=GSCOCT00034620001 | |
| 40128 chr10 manual_curation CDS 5563451 5563539 . + 0 Parent=GSCOCT00034620001 | |
| 40129 chr10 manual_curation CDS 5562537 5562604 . + 1 Parent=GSCOCT00034620001 | |
| 40130 chr10 manual_curation CDS 5562317 5562416 . + 0 Parent=GSCOCT00034620001 | |
| 40131 chr10 manual_curation CDS 5561980 5562075 . + 0 Parent=GSCOCT00034620001 | |
| 40132 chr10 manual_curation CDS 5561387 5561530 . + 0 Parent=GSCOCT00034620001 | |
| 40133 chr10 manual_curation gene 5566750 5570820 . + . ID=GSCOCG00034619001;Name=Cc10_g06720 | |
| 40134 chr10 manual_curation mRNA 5566750 5570820 . + . ID=GSCOCT00034619001;Parent=GSCOCG00034619001;Name=Cc10_g06720 | |
| 40135 chr10 manual_curation polypeptide 5566959 5570820 . + . ID=GSCOCP00034619001;Dbxref=InterPro:IPR002016,InterPro:IPR002207,InterPro:IPR010255,PFAM:PF00141,PRINTS:PR00459,SUPERFAMILY:SSF48113,SwissProt:P82281,SwissProt:Q0JEQ2,SwissProt:Q9THX6,TAIR:AT4G09010.1,TAIR:AT4G32320.1,TAIR:AT4G35970.1,TrEMBL:B9H703,TrEMBL:E0CRP4,TrEMBL:G7KAG7;Derives_from=GSCOCT00034619001;Name=Cc10_g06720;Ontology_term=CC_evidence_code:ISS,GO:0004601,GO:0006979,GO:0020037,GO:0055114,CC_EC_number:1.11.1.11,PRODUCT:Thylakoid lumenal 29 kDa protein%2C chloroplastic,CC_functional_completeness:complete,CC_gene:CLEB3J9,CC_gene:TL29,CC_gene:APX3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034619001~ Thylakoid lumenal 29 kDa protein%2C chloroplastic~ CLEB3J9~ complete;original_location=complement(join(3494154..3494243%2C3493630..3493725%2C3493204..3493288%2C3493064..3493098%2C3492897..3492962%2C3492773..3492813%2C3492267..3492397%2C3491672..3491778%2C3490953..3491090%2C3490382..3490561));owner=coffea | |
| 40136 chr10 manual_curation exon 5570641 5570820 . + . Parent=GSCOCT00034619001 | |
| 40137 chr10 manual_curation exon 5570112 5570249 . + . Parent=GSCOCT00034619001 | |
| 40138 chr10 manual_curation exon 5569424 5569530 . + . Parent=GSCOCT00034619001 | |
| 40139 chr10 manual_curation exon 5568805 5568935 . + . Parent=GSCOCT00034619001 | |
| 40140 chr10 manual_curation exon 5568389 5568429 . + . Parent=GSCOCT00034619001 | |
| 40141 chr10 manual_curation exon 5568240 5568305 . + . Parent=GSCOCT00034619001 | |
| 40142 chr10 manual_curation exon 5568104 5568138 . + . Parent=GSCOCT00034619001 | |
| 40143 chr10 manual_curation exon 5567914 5567998 . + . Parent=GSCOCT00034619001 | |
| 40144 chr10 manual_curation exon 5567477 5567572 . + . Parent=GSCOCT00034619001 | |
| 40145 chr10 manual_curation exon 5566750 5567048 . + . Parent=GSCOCT00034619001 | |
| 40146 chr10 manual_curation CDS 5570641 5570820 . + 0 Parent=GSCOCT00034619001 | |
| 40147 chr10 manual_curation CDS 5570112 5570249 . + 0 Parent=GSCOCT00034619001 | |
| 40148 chr10 manual_curation CDS 5569424 5569530 . + 1 Parent=GSCOCT00034619001 | |
| 40149 chr10 manual_curation CDS 5568805 5568935 . + 2 Parent=GSCOCT00034619001 | |
| 40150 chr10 manual_curation CDS 5568389 5568429 . + 0 Parent=GSCOCT00034619001 | |
| 40151 chr10 manual_curation CDS 5568240 5568305 . + 0 Parent=GSCOCT00034619001 | |
| 40152 chr10 manual_curation CDS 5568104 5568138 . + 1 Parent=GSCOCT00034619001 | |
| 40153 chr10 manual_curation CDS 5567914 5567998 . + 0 Parent=GSCOCT00034619001 | |
| 40154 chr10 manual_curation CDS 5567477 5567572 . + 0 Parent=GSCOCT00034619001 | |
| 40155 chr10 manual_curation CDS 5566959 5567048 . + 0 Parent=GSCOCT00034619001 | |
| 40156 chr10 manual_curation gene 5570883 5571744 . + . ID=GSCOCG00034618001;Name=Cc10_g06730 | |
| 40157 chr10 manual_curation mRNA 5570883 5571744 . + . ID=GSCOCT00034618001;Parent=GSCOCG00034618001;Name=Cc10_g06730 | |
| 40158 chr10 manual_curation polypeptide 5570883 5571242 . + . ID=GSCOCP00034618001;Derives_from=GSCOCT00034618001;Name=Cc10_g06730;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034618001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(3490233..3490319%2C3489960..3490070));owner=coffea | |
| 40159 chr10 manual_curation exon 5571132 5571744 . + . Parent=GSCOCT00034618001 | |
| 40160 chr10 manual_curation exon 5570883 5570969 . + . Parent=GSCOCT00034618001 | |
| 40161 chr10 manual_curation CDS 5571132 5571242 . + 0 Parent=GSCOCT00034618001 | |
| 40162 chr10 manual_curation CDS 5570883 5570969 . + 0 Parent=GSCOCT00034618001 | |
| 40163 chr10 manual_curation gene 5571863 5575939 . - . ID=GSCOCG00034617001;Name=Cc10_g06740 | |
| 40164 chr10 manual_curation mRNA 5571863 5575939 . - . ID=GSCOCT00034617001;Parent=GSCOCG00034617001;Name=Cc10_g06740 | |
| 40165 chr10 manual_curation polypeptide 5571863 5575852 . - . ID=GSCOCP00034617001;Dbxref=GENE3D:G3DSA:1.10.287.40,InterPro:IPR002314,InterPro:IPR002317,InterPro:IPR006195,InterPro:IPR010978,InterPro:IPR015866,InterPro:IPR018156,PANTHER:PTHR11778,PFAM:PF00587,PFAM:PF02403,PIR:PIRSF001529,PRINTS:PR00981,PROFILE:PS50862,SUPERFAMILY:SSF46589,SwissProt:B8E0R9,SwissProt:Q1AX26,SwissProt:Q73KB2,TAIR:AT1G11870.2,TAIR:AT5G27470.1,TIGRFAMs:TIGR00414,TrEMBL:A9PFH5,TrEMBL:B9GUZ6,TrEMBL:G7J3Z0;Derives_from=GSCOCT00034617001;Name=Cc10_g06740;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0004812,GO:0004828,GO:0005524,GO:0005737,GO:0006412,GO:0006418,GO:0006434,CC_EC_number:6.1.1.11,PRODUCT:Serine--tRNA ligase,CC_functional_completeness:complete,CC_gene:serS;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034617001~ Serine--tRNA ligase~ serS~ complete;original_location=join(3485350..3485590%2C3485695..3485843%2C3486198..3486291%2C3486368..3486516%2C3486607..3486699%2C3487501..3487680%2C3487842..3488008%2C3488541..3488675%2C3488789..3488882%2C3489067..3489339);owner=coffea | |
| 40166 chr10 manual_curation exon 5575612 5575939 . - . Parent=GSCOCT00034617001 | |
| 40167 chr10 manual_curation exon 5575359 5575507 . - . Parent=GSCOCT00034617001 | |
| 40168 chr10 manual_curation exon 5574911 5575004 . - . Parent=GSCOCT00034617001 | |
| 40169 chr10 manual_curation exon 5574686 5574834 . - . Parent=GSCOCT00034617001 | |
| 40170 chr10 manual_curation exon 5574503 5574595 . - . Parent=GSCOCT00034617001 | |
| 40171 chr10 manual_curation exon 5573522 5573701 . - . Parent=GSCOCT00034617001 | |
| 40172 chr10 manual_curation exon 5573194 5573360 . - . Parent=GSCOCT00034617001 | |
| 40173 chr10 manual_curation exon 5572527 5572661 . - . Parent=GSCOCT00034617001 | |
| 40174 chr10 manual_curation exon 5572320 5572413 . - . Parent=GSCOCT00034617001 | |
| 40175 chr10 manual_curation exon 5571863 5572135 . - . Parent=GSCOCT00034617001 | |
| 40176 chr10 manual_curation CDS 5575612 5575852 . - 0 Parent=GSCOCT00034617001 | |
| 40177 chr10 manual_curation CDS 5575359 5575507 . - 1 Parent=GSCOCT00034617001 | |
| 40178 chr10 manual_curation CDS 5574911 5575004 . - 0 Parent=GSCOCT00034617001 | |
| 40179 chr10 manual_curation CDS 5574686 5574834 . - 1 Parent=GSCOCT00034617001 | |
| 40180 chr10 manual_curation CDS 5574503 5574595 . - 0 Parent=GSCOCT00034617001 | |
| 40181 chr10 manual_curation CDS 5573522 5573701 . - 0 Parent=GSCOCT00034617001 | |
| 40182 chr10 manual_curation CDS 5573194 5573360 . - 0 Parent=GSCOCT00034617001 | |
| 40183 chr10 manual_curation CDS 5572527 5572661 . - 2 Parent=GSCOCT00034617001 | |
| 40184 chr10 manual_curation CDS 5572320 5572413 . - 2 Parent=GSCOCT00034617001 | |
| 40185 chr10 manual_curation CDS 5571863 5572135 . - 0 Parent=GSCOCT00034617001 | |
| 40186 chr10 manual_curation gene 5576777 5580741 . - . ID=GSCOCG00034616001;Name=Cc10_g06750 | |
| 40187 chr10 manual_curation mRNA 5576777 5580741 . - . ID=GSCOCT00034616001;Parent=GSCOCG00034616001;Name=Cc10_g06750 | |
| 40188 chr10 manual_curation polypeptide 5577275 5580499 . - . ID=GSCOCP00034616001;Dbxref=GENE3D:G3DSA:1.10.10.140,InterPro:IPR003213,PANTHER:PTHR11387:SF2,PFAM:PF02297,SUPERFAMILY:SSF47694,SwissProt:Q945L0,SwissProt:Q9S7L9,SwissProt:Q9SUD3,TAIR:AT1G22450.1,TAIR:AT4G28060.1,TAIR:AT5G57815.1,TrEMBL:A9PHL0,TrEMBL:B9RJN9,TrEMBL:I1MAW4;Derives_from=GSCOCT00034616001;Name=Cc10_g06750;Ontology_term=CC_evidence_code:ISS,GO:0004129,GO:0005739,CC_EC_number:1.9.3.1,PRODUCT:Cytochrome c oxidase subunit 6b-1,CC_functional_completeness:complete,CC_gene:COX6B-1,CC_gene:COX6B-3,CC_gene:COX6B-2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034616001~ Cytochrome c oxidase subunit 6b-1~ COX6B-1~ complete;original_location=join(3480703..3480744%2C3482804..3483127%2C3483220..3483302%2C3483433..3483514%2C3483874..3483927);owner=coffea | |
| 40189 chr10 manual_curation exon 5580458 5580741 . - . Parent=GSCOCT00034616001 | |
| 40190 chr10 manual_curation exon 5578075 5578398 . - . Parent=GSCOCT00034616001 | |
| 40191 chr10 manual_curation exon 5577900 5577982 . - . Parent=GSCOCT00034616001 | |
| 40192 chr10 manual_curation exon 5577688 5577769 . - . Parent=GSCOCT00034616001 | |
| 40193 chr10 manual_curation exon 5576777 5577328 . - . Parent=GSCOCT00034616001 | |
| 40194 chr10 manual_curation CDS 5580458 5580499 . - 0 Parent=GSCOCT00034616001 | |
| 40195 chr10 manual_curation CDS 5578075 5578398 . - 0 Parent=GSCOCT00034616001 | |
| 40196 chr10 manual_curation CDS 5577900 5577982 . - 0 Parent=GSCOCT00034616001 | |
| 40197 chr10 manual_curation CDS 5577688 5577769 . - 2 Parent=GSCOCT00034616001 | |
| 40198 chr10 manual_curation CDS 5577275 5577328 . - 0 Parent=GSCOCT00034616001 | |
| 40199 chr10 manual_curation gene 5581996 5585653 . - . ID=GSCOCG00034615001;Name=Cc10_g06760 | |
| 40200 chr10 manual_curation mRNA 5581996 5585653 . - . ID=GSCOCT00034615001;Parent=GSCOCG00034615001;Name=Cc10_g06760 | |
| 40201 chr10 manual_curation polypeptide 5582241 5585571 . - . ID=GSCOCP00034615001;Dbxref=InterPro:IPR002085,InterPro:IPR002328,InterPro:IPR011032,InterPro:IPR013149,InterPro:IPR013154,PANTHER:PTHR11695,PFAM:PF00107,PFAM:PF08240,PROSITE:PS00059,SUPERFAMILY:SSF50129,SwissProt:Q0V7W6,SwissProt:Q9SK86,SwissProt:Q9SK87,TAIR:AT1G22430.1,TAIR:AT1G22440.1,TAIR:AT4G22110.1,TrEMBL:F2EFZ9,TrEMBL:G7K2X3,TrEMBL:I1H8S0;Derives_from=GSCOCT00034615001;Name=Cc10_g06760;Ontology_term=CC_evidence_code:ISS,GO:0008270,GO:0016491,GO:0055114,CC_EC_number:1.1.1.284,PRODUCT:Alcohol dehydrogenase-like 1,CC_functional_completeness:complete,CC_gene:At1g22430,CC_gene:At4g22110,CC_gene:At1g22440;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034615001~ Alcohol dehydrogenase-like 1~ At1g22430~ complete;original_location=join(3475631..3475682%2C3475794..3475933%2C3476024..3476070%2C3476168..3476490%2C3476788..3476963%2C3477158..3477233%2C3477328..3477392%2C3477481..3477576%2C3478298..3478459%2C3478845..3478961);owner=coffea | |
| 40202 chr10 manual_curation exon 5585520 5585653 . - . Parent=GSCOCT00034615001 | |
| 40203 chr10 manual_curation exon 5585269 5585408 . - . Parent=GSCOCT00034615001 | |
| 40204 chr10 manual_curation exon 5585132 5585178 . - . Parent=GSCOCT00034615001 | |
| 40205 chr10 manual_curation exon 5584712 5585034 . - . Parent=GSCOCT00034615001 | |
| 40206 chr10 manual_curation exon 5584239 5584414 . - . Parent=GSCOCT00034615001 | |
| 40207 chr10 manual_curation exon 5583969 5584044 . - . Parent=GSCOCT00034615001 | |
| 40208 chr10 manual_curation exon 5583810 5583874 . - . Parent=GSCOCT00034615001 | |
| 40209 chr10 manual_curation exon 5583626 5583721 . - . Parent=GSCOCT00034615001 | |
| 40210 chr10 manual_curation exon 5582743 5582904 . - . Parent=GSCOCT00034615001 | |
| 40211 chr10 manual_curation exon 5581996 5582357 . - . Parent=GSCOCT00034615001 | |
| 40212 chr10 manual_curation CDS 5585520 5585571 . - 0 Parent=GSCOCT00034615001 | |
| 40213 chr10 manual_curation CDS 5585269 5585408 . - 1 Parent=GSCOCT00034615001 | |
| 40214 chr10 manual_curation CDS 5585132 5585178 . - 0 Parent=GSCOCT00034615001 | |
| 40215 chr10 manual_curation CDS 5584712 5585034 . - 2 Parent=GSCOCT00034615001 | |
| 40216 chr10 manual_curation CDS 5584239 5584414 . - 1 Parent=GSCOCT00034615001 | |
| 40217 chr10 manual_curation CDS 5583969 5584044 . - 0 Parent=GSCOCT00034615001 | |
| 40218 chr10 manual_curation CDS 5583810 5583874 . - 1 Parent=GSCOCT00034615001 | |
| 40219 chr10 manual_curation CDS 5583626 5583721 . - 0 Parent=GSCOCT00034615001 | |
| 40220 chr10 manual_curation CDS 5582743 5582904 . - 0 Parent=GSCOCT00034615001 | |
| 40221 chr10 manual_curation CDS 5582241 5582357 . - 0 Parent=GSCOCT00034615001 | |
| 40222 chr10 manual_curation gene 5595312 5596298 . + . ID=GSCOCG00034614001;Name=Cc10_g06770 | |
| 40223 chr10 manual_curation mRNA 5595312 5596298 . + . ID=GSCOCT00034614001;Parent=GSCOCG00034614001;Name=Cc10_g06770 | |
| 40224 chr10 manual_curation polypeptide 5595312 5596298 . + . ID=GSCOCP00034614001;Dbxref=InterPro:IPR008889,PFAM:PF05678,TAIR:AT1G78310.1,TAIR:AT2G35230.1,TAIR:AT5G46780.1,TrEMBL:B9H707,TrEMBL:F6H0X4,TrEMBL:I1JVB8;Derives_from=GSCOCT00034614001;Name=Cc10_g06770;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative VQ motif-containing protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034614001~ Putative VQ motif-containing protein~ unknown_gene~ complete;original_location=complement(3464904..3465890);owner=coffea | |
| 40225 chr10 manual_curation exon 5595312 5596298 . + . Parent=GSCOCT00034614001 | |
| 40226 chr10 manual_curation CDS 5595312 5596298 . + 0 Parent=GSCOCT00034614001 | |
| 40227 chr10 manual_curation gene 5600281 5602831 . - . ID=GSCOCG00034611001;Name=Cc10_g06780 | |
| 40228 chr10 manual_curation mRNA 5600281 5602831 . - . ID=GSCOCT00034611001;Parent=GSCOCG00034611001;Name=Cc10_g06780 | |
| 40229 chr10 manual_curation polypeptide 5600752 5602296 . - . ID=GSCOCP00034611001;Dbxref=GENE3D:G3DSA:1.20.190.20,InterPro:IPR000308,PANTHER:PTHR18860,PFAM:PF00244,PRINTS:PR00305,PROSITE:PS00797,SMART:SM00101,SUPERFAMILY:SSF48445,TAIR:AT5G16050.1,TAIR:AT5G38480.1;Derives_from=GSCOCT00034611001;Name=Cc10_g06780;Ontology_term=CC_evidence_code:ISS,GO:0019904,CC_EC_number:missing_EC_number,PRODUCT:general regulatory factor 3,CC_functional_completeness:fragment,CC_gene:TFT2,CC_gene:TFT3,CC_gene:TFT6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034611001~ general regulatory factor 3~ TFT2~ fragment;original_location=join(3458906..3459004%2C3459948..3460070%2C3460158..3460274%2C3460394..3460450);owner=coffea | |
| 40230 chr10 manual_curation exon 5602198 5602831 . - . Parent=GSCOCT00034611001 | |
| 40231 chr10 manual_curation exon 5601132 5601254 . - . Parent=GSCOCT00034611001 | |
| 40232 chr10 manual_curation exon 5600928 5601044 . - . Parent=GSCOCT00034611001 | |
| 40233 chr10 manual_curation exon 5600281 5600808 . - . Parent=GSCOCT00034611001 | |
| 40234 chr10 manual_curation CDS 5602198 5602296 . - 0 Parent=GSCOCT00034611001 | |
| 40235 chr10 manual_curation CDS 5601132 5601254 . - 0 Parent=GSCOCT00034611001 | |
| 40236 chr10 manual_curation CDS 5600928 5601044 . - 0 Parent=GSCOCT00034611001 | |
| 40237 chr10 manual_curation CDS 5600752 5600808 . - 0 Parent=GSCOCT00034611001 | |
| 40238 chr10 manual_curation gene 5605986 5610769 . + . ID=GSCOCG00034610001;Name=Cc10_g06790 | |
| 40239 chr10 manual_curation mRNA 5605986 5610769 . + . ID=GSCOCT00034610001;Parent=GSCOCG00034610001;Name=Cc10_g06790 | |
| 40240 chr10 manual_curation polypeptide 5606335 5610570 . + . ID=GSCOCP00034610001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR015740,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,InterPro:IPR020636,PANTHER:PTHR22982,PANTHER:PTHR22982:SF58,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:A2YNT8,SwissProt:Q0D4J7,SwissProt:Q75LR7,TAIR:AT1G78290.2,TAIR:AT4G33950.1,TAIR:AT5G08590.1,TrEMBL:B9RJN6,TrEMBL:G7KAG1,TrEMBL:I1JGV0;Derives_from=GSCOCT00034610001;Name=Cc10_g06790;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,GO:0006970,CC_EC_number:2.7.11.1,PRODUCT:Serine/threonine-protein kinase SAPK2,CC_functional_completeness:complete,CC_gene:SAPK2,CC_gene:SAPK1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034610001~ Serine/threonine-protein kinase SAPK2~ SAPK2~ complete;original_location=complement(join(3454748..3454867%2C3454559..3454633%2C3453871..3453972%2C3452054..3452107%2C3451872..3451964%2C3451691..3451783%2C3451489..3451593%2C3451282..3451380%2C3450632..3450901));owner=coffea | |
| 40241 chr10 manual_curation exon 5610301 5610769 . + . Parent=GSCOCT00034610001 | |
| 40242 chr10 manual_curation exon 5609822 5609920 . + . Parent=GSCOCT00034610001 | |
| 40243 chr10 manual_curation exon 5609609 5609713 . + . Parent=GSCOCT00034610001 | |
| 40244 chr10 manual_curation exon 5609419 5609511 . + . Parent=GSCOCT00034610001 | |
| 40245 chr10 manual_curation exon 5609238 5609330 . + . Parent=GSCOCT00034610001 | |
| 40246 chr10 manual_curation exon 5609095 5609148 . + . Parent=GSCOCT00034610001 | |
| 40247 chr10 manual_curation exon 5607230 5607331 . + . Parent=GSCOCT00034610001 | |
| 40248 chr10 manual_curation exon 5606569 5606643 . + . Parent=GSCOCT00034610001 | |
| 40249 chr10 manual_curation exon 5605986 5606454 . + . Parent=GSCOCT00034610001 | |
| 40250 chr10 manual_curation CDS 5610301 5610570 . + 0 Parent=GSCOCT00034610001 | |
| 40251 chr10 manual_curation CDS 5609822 5609920 . + 0 Parent=GSCOCT00034610001 | |
| 40252 chr10 manual_curation CDS 5609609 5609713 . + 0 Parent=GSCOCT00034610001 | |
| 40253 chr10 manual_curation CDS 5609419 5609511 . + 0 Parent=GSCOCT00034610001 | |
| 40254 chr10 manual_curation CDS 5609238 5609330 . + 0 Parent=GSCOCT00034610001 | |
| 40255 chr10 manual_curation CDS 5609095 5609148 . + 0 Parent=GSCOCT00034610001 | |
| 40256 chr10 manual_curation CDS 5607230 5607331 . + 0 Parent=GSCOCT00034610001 | |
| 40257 chr10 manual_curation CDS 5606569 5606643 . + 0 Parent=GSCOCT00034610001 | |
| 40258 chr10 manual_curation CDS 5606335 5606454 . + 0 Parent=GSCOCT00034610001 | |
| 40259 chr10 manual_curation gene 5613256 5615453 . - . ID=GSCOCG00034609001;Name=Cc10_g06800 | |
| 40260 chr10 manual_curation mRNA 5613256 5615453 . - . ID=GSCOCT00034609001;Parent=GSCOCG00034609001;Name=Cc10_g06800 | |
| 40261 chr10 manual_curation polypeptide 5613959 5615145 . - . ID=GSCOCP00034609001;Dbxref=InterPro:IPR000620,InterPro:IPR004853,PFAM:PF00892,PFAM:PF03151,SwissProt:Q94GB1,SwissProt:Q9FZ95,SwissProt:Q9FZ96,TAIR:AT1G28220.1,TAIR:AT1G28230.1,TAIR:AT2G33750.1,TrEMBL:B9GUY9,TrEMBL:B9RJN5,TrEMBL:E0CRN8;Derives_from=GSCOCT00034609001;Name=Cc10_g06800;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative Purine permease 3,CC_functional_completeness:complete,CC_gene:PUP3,CC_gene:PUP1,CC_gene:PUP2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034609001~ Putative Purine permease 3~ PUP3~ complete;original_location=join(3446057..3446803%2C3446911..3447243);owner=coffea | |
| 40262 chr10 manual_curation exon 5614399 5615453 . - . Parent=GSCOCT00034609001 | |
| 40263 chr10 manual_curation exon 5613256 5614291 . - . Parent=GSCOCT00034609001 | |
| 40264 chr10 manual_curation CDS 5614399 5615145 . - 0 Parent=GSCOCT00034609001 | |
| 40265 chr10 manual_curation CDS 5613959 5614291 . - 0 Parent=GSCOCT00034609001 | |
| 40266 chr10 manual_curation gene 5619416 5628793 . - . ID=GSCOCG00034608001;Name=Cc10_g06810 | |
| 40267 chr10 manual_curation mRNA 5619416 5628793 . - . ID=GSCOCT00034608001;Parent=GSCOCG00034608001;Name=Cc10_g06810 | |
| 40268 chr10 manual_curation polypeptide 5620216 5628663 . - . ID=GSCOCP00034608001;Dbxref=InterPro:IPR001810,InterPro:IPR003347,InterPro:IPR011009,InterPro:IPR013129,InterPro:IPR022364,PFAM:PF00646,PFAM:PF02373,PROFILE:PS50181,PROFILE:PS51184,SMART:SM00256,SMART:SM00558,SUPERFAMILY:SSF56112,SUPERFAMILY:SSF81383,SwissProt:Q67XX3,SwissProt:Q6PFM0,SwissProt:Q9M9E8,TAIR:AT1G78280.1,TAIR:AT5G06550.1,TrEMBL:B9RJN3,TrEMBL:E0CRN6,TrEMBL:I1K9W1;Derives_from=GSCOCT00034608001;Name=Cc10_g06810;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:F-box protein At1g78280,CC_functional_completeness:complete,CC_gene:At1g78280,CC_gene:At5g06550,CC_gene:jmjd6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034608001~ F-box protein At1g78280~ At1g78280~ complete;original_location=join(3432539..3432732%2C3433345..3433455%2C3433563..3433618%2C3433700..3433842%2C3434292..3434489%2C3434564..3434763%2C3435621..3435720%2C3435851..3436387%2C3436813..3436935%2C3437487..3437567%2C3437661..3437995%2C3438114..3438371%2C3439125..3439209%2C3439355..3439571%2C3440338..3440491%2C3440845..3440986);owner=coffea | |
| 40269 chr10 manual_curation exon 5628470 5628793 . - . Parent=GSCOCT00034608001 | |
| 40270 chr10 manual_curation exon 5627747 5627857 . - . Parent=GSCOCT00034608001 | |
| 40271 chr10 manual_curation exon 5627584 5627639 . - . Parent=GSCOCT00034608001 | |
| 40272 chr10 manual_curation exon 5627360 5627502 . - . Parent=GSCOCT00034608001 | |
| 40273 chr10 manual_curation exon 5626713 5626910 . - . Parent=GSCOCT00034608001 | |
| 40274 chr10 manual_curation exon 5626439 5626638 . - . Parent=GSCOCT00034608001 | |
| 40275 chr10 manual_curation exon 5625482 5625581 . - . Parent=GSCOCT00034608001 | |
| 40276 chr10 manual_curation exon 5624815 5625351 . - . Parent=GSCOCT00034608001 | |
| 40277 chr10 manual_curation exon 5624267 5624389 . - . Parent=GSCOCT00034608001 | |
| 40278 chr10 manual_curation exon 5623635 5623715 . - . Parent=GSCOCT00034608001 | |
| 40279 chr10 manual_curation exon 5623207 5623541 . - . Parent=GSCOCT00034608001 | |
| 40280 chr10 manual_curation exon 5622831 5623088 . - . Parent=GSCOCT00034608001 | |
| 40281 chr10 manual_curation exon 5621993 5622077 . - . Parent=GSCOCT00034608001 | |
| 40282 chr10 manual_curation exon 5621631 5621847 . - . Parent=GSCOCT00034608001 | |
| 40283 chr10 manual_curation exon 5620711 5620864 . - . Parent=GSCOCT00034608001 | |
| 40284 chr10 manual_curation exon 5619416 5620357 . - . Parent=GSCOCT00034608001 | |
| 40285 chr10 manual_curation CDS 5628470 5628663 . - 0 Parent=GSCOCT00034608001 | |
| 40286 chr10 manual_curation CDS 5627747 5627857 . - 2 Parent=GSCOCT00034608001 | |
| 40287 chr10 manual_curation CDS 5627584 5627639 . - 2 Parent=GSCOCT00034608001 | |
| 40288 chr10 manual_curation CDS 5627360 5627502 . - 1 Parent=GSCOCT00034608001 | |
| 40289 chr10 manual_curation CDS 5626713 5626910 . - 0 Parent=GSCOCT00034608001 | |
| 40290 chr10 manual_curation CDS 5626439 5626638 . - 0 Parent=GSCOCT00034608001 | |
| 40291 chr10 manual_curation CDS 5625482 5625581 . - 2 Parent=GSCOCT00034608001 | |
| 40292 chr10 manual_curation CDS 5624815 5625351 . - 0 Parent=GSCOCT00034608001 | |
| 40293 chr10 manual_curation CDS 5624267 5624389 . - 0 Parent=GSCOCT00034608001 | |
| 40294 chr10 manual_curation CDS 5623635 5623715 . - 0 Parent=GSCOCT00034608001 | |
| 40295 chr10 manual_curation CDS 5623207 5623541 . - 0 Parent=GSCOCT00034608001 | |
| 40296 chr10 manual_curation CDS 5622831 5623088 . - 2 Parent=GSCOCT00034608001 | |
| 40297 chr10 manual_curation CDS 5621993 5622077 . - 2 Parent=GSCOCT00034608001 | |
| 40298 chr10 manual_curation CDS 5621631 5621847 . - 0 Parent=GSCOCT00034608001 | |
| 40299 chr10 manual_curation CDS 5620711 5620864 . - 1 Parent=GSCOCT00034608001 | |
| 40300 chr10 manual_curation CDS 5620216 5620357 . - 2 Parent=GSCOCT00034608001 | |
| 40301 chr10 manual_curation gene 5632713 5636577 . - . ID=GSCOCG00034607001;Name=Cc10_g06820 | |
| 40302 chr10 manual_curation mRNA 5632713 5636577 . - . ID=GSCOCT00034607001;Parent=GSCOCG00034607001;Name=Cc10_g06820 | |
| 40303 chr10 manual_curation polypeptide 5633028 5636385 . - . ID=GSCOCP00034607001;Dbxref=InterPro:IPR002480,PANTHER:PTHR21337,PFAM:PF01474,SwissProt:P21357,SwissProt:P27608,SwissProt:P37216,TAIR:AT1G22410.1,TAIR:AT4G33510.1,TAIR:AT4G39980.1,TIGRFAMs:TIGR01358,TrEMBL:A9PF21,TrEMBL:B9GUY5,TrEMBL:O24051;Derives_from=GSCOCT00034607001;Name=Cc10_g06820;Ontology_term=CC_evidence_code:ISS,GO:0003849,GO:0009073,CC_EC_number:2.5.1.54,PRODUCT:Phospho-2-dehydro-3-deoxyheptonate aldolase 1%2C chloroplastic,CC_functional_completeness:complete,CC_gene:SHKA,CC_gene:DHAPS-1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034607001~ Phospho-2-dehydro-3-deoxyheptonate aldolase 1%2C chloroplastic~ SHKA~ complete;original_location=join(3424817..3425368%2C3425818..3426095%2C3426539..3426815%2C3426953..3427198%2C3427917..3428174);owner=coffea | |
| 40304 chr10 manual_curation exon 5635834 5636577 . - . Parent=GSCOCT00034607001 | |
| 40305 chr10 manual_curation exon 5635107 5635384 . - . Parent=GSCOCT00034607001 | |
| 40306 chr10 manual_curation exon 5634387 5634663 . - . Parent=GSCOCT00034607001 | |
| 40307 chr10 manual_curation exon 5634004 5634249 . - . Parent=GSCOCT00034607001 | |
| 40308 chr10 manual_curation exon 5632713 5633285 . - . Parent=GSCOCT00034607001 | |
| 40309 chr10 manual_curation CDS 5635834 5636385 . - 0 Parent=GSCOCT00034607001 | |
| 40310 chr10 manual_curation CDS 5635107 5635384 . - 0 Parent=GSCOCT00034607001 | |
| 40311 chr10 manual_curation CDS 5634387 5634663 . - 2 Parent=GSCOCT00034607001 | |
| 40312 chr10 manual_curation CDS 5634004 5634249 . - 0 Parent=GSCOCT00034607001 | |
| 40313 chr10 manual_curation CDS 5633028 5633285 . - 0 Parent=GSCOCT00034607001 | |
| 40314 chr10 manual_curation gene 5642732 5645333 . - . ID=GSCOCG00034606001;Name=Cc10_g06830 | |
| 40315 chr10 manual_curation mRNA 5642732 5645333 . - . ID=GSCOCT00034606001;Parent=GSCOCG00034606001;Name=Cc10_g06830 | |
| 40316 chr10 manual_curation polypeptide 5642938 5644368 . - . ID=GSCOCP00034606001;Dbxref=SwissProt:Q9M0U9,SwissProt:Q9S9V9,SwissProt:Q9ZPE4,TAIR:AT4G05460.1,TAIR:AT4G08980.1,TAIR:AT5G57900.1,TrEMBL:B9GUY3,TrEMBL:B9RJN1,TrEMBL:I1JVC5;Derives_from=GSCOCT00034606001;Name=Cc10_g06830;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:F-box protein FBW2,CC_functional_completeness:complete,CC_gene:FBW2,CC_gene:SKIP19,CC_gene:FBL23;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034606001~ F-box protein FBW2~ FBW2~ complete;original_location=join(3416834..3416857%2C3416942..3417255%2C3417661..3418264);owner=coffea | |
| 40317 chr10 manual_curation exon 5644345 5645333 . - . Parent=GSCOCT00034606001 | |
| 40318 chr10 manual_curation exon 5643947 5644260 . - . Parent=GSCOCT00034606001 | |
| 40319 chr10 manual_curation exon 5642732 5643541 . - . Parent=GSCOCT00034606001 | |
| 40320 chr10 manual_curation CDS 5644345 5644368 . - 0 Parent=GSCOCT00034606001 | |
| 40321 chr10 manual_curation CDS 5643947 5644260 . - 0 Parent=GSCOCT00034606001 | |
| 40322 chr10 manual_curation CDS 5642938 5643541 . - 2 Parent=GSCOCT00034606001 | |
| 40323 chr10 manual_curation gene 5682466 5683825 . - . ID=GSCOCG00034605001;Name=Cc10_g06840 | |
| 40324 chr10 manual_curation mRNA 5682466 5683825 . - . ID=GSCOCT00034605001;Parent=GSCOCG00034605001;Name=Cc10_g06840 | |
| 40325 chr10 manual_curation polypeptide 5682781 5683728 . - . ID=GSCOCP00034605001;Dbxref=InterPro:IPR006766,PFAM:PF04674,TAIR:AT1G35140.1,TAIR:AT4G08950.1,TAIR:AT5G64260.1,TrEMBL:A5AG33,TrEMBL:B9P856,TrEMBL:F6H0W9;Derives_from=GSCOCT00034605001;Name=Cc10_g06840;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Phosphate-responsive 1 family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034605001~ Phosphate-responsive 1 family protein~ unknown_gene~ complete;original_location=3377474..3378421;owner=coffea | |
| 40326 chr10 manual_curation exon 5682466 5683825 . - . Parent=GSCOCT00034605001 | |
| 40327 chr10 manual_curation CDS 5682781 5683728 . - 0 Parent=GSCOCT00034605001 | |
| 40328 chr10 manual_curation gene 5685952 5687203 . - . ID=GSCOCG00034604001;Name=Cc10_g06850 | |
| 40329 chr10 manual_curation mRNA 5685952 5687203 . - . ID=GSCOCT00034604001;Parent=GSCOCG00034604001;Name=Cc10_g06850 | |
| 40330 chr10 manual_curation polypeptide 5686181 5686708 . - . ID=GSCOCP00034604001;Dbxref=InterPro:IPR006766,PFAM:PF04674,TAIR:AT1G35140.1,TAIR:AT4G08950.1,TAIR:AT5G64260.1,TrEMBL:A5AG33,TrEMBL:B9H721,TrEMBL:B9P856;Derives_from=GSCOCT00034604001;Name=Cc10_g06850;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Phosphate-responsive 1 family protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034604001~ Phosphate-responsive 1 family protein~ unknown_gene~ fragment;original_location=3374494..3375021;owner=coffea | |
| 40331 chr10 manual_curation exon 5685952 5687203 . - . Parent=GSCOCT00034604001 | |
| 40332 chr10 manual_curation CDS 5686181 5686708 . - 0 Parent=GSCOCT00034604001 | |
| 40333 chr10 manual_curation gene 5691622 5693206 . - . ID=GSCOCG00034603001;Name=Cc10_g06860 | |
| 40334 chr10 manual_curation mRNA 5691622 5693206 . - . ID=GSCOCT00034603001;Parent=GSCOCG00034603001;Name=Cc10_g06860 | |
| 40335 chr10 manual_curation polypeptide 5692094 5692618 . - . ID=GSCOCP00034603001;Dbxref=InterPro:IPR006766,PFAM:PF04674,TAIR:AT1G35140.1,TAIR:AT4G08950.1,TAIR:AT5G64260.1,TrEMBL:A5AG33,TrEMBL:B9H721,TrEMBL:B9P856;Derives_from=GSCOCT00034603001;Name=Cc10_g06860;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Phosphate-responsive 1 family protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034603001~ Phosphate-responsive 1 family protein~ unknown_gene~ fragment;original_location=3368584..3369108;owner=coffea | |
| 40336 chr10 manual_curation exon 5691622 5693206 . - . Parent=GSCOCT00034603001 | |
| 40337 chr10 manual_curation CDS 5692094 5692618 . - 0 Parent=GSCOCT00034603001 | |
| 40338 chr10 manual_curation gene 5695834 5697697 . - . ID=GSCOCG00034602001;Name=Cc10_g06870 | |
| 40339 chr10 manual_curation mRNA 5695834 5697697 . - . ID=GSCOCT00034602001;Parent=GSCOCG00034602001;Name=Cc10_g06870 | |
| 40340 chr10 manual_curation polypeptide 5696375 5697337 . - . ID=GSCOCP00034602001;Dbxref=InterPro:IPR006766,PFAM:PF04674,TAIR:AT1G35140.1,TAIR:AT4G08950.1,TAIR:AT5G64260.1,TrEMBL:B9GUX9,TrEMBL:B9RJM4,TrEMBL:O82161;Derives_from=GSCOCT00034602001;Name=Cc10_g06870;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Phosphate-responsive 1 family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034602001~ Phosphate-responsive 1 family protein~ unknown_gene~ complete;original_location=3363865..3364827;owner=coffea | |
| 40341 chr10 manual_curation exon 5695834 5697697 . - . Parent=GSCOCT00034602001 | |
| 40342 chr10 manual_curation CDS 5696375 5697337 . - 0 Parent=GSCOCT00034602001 | |
| 40343 chr10 manual_curation gene 5703230 5704180 . + . ID=GSCOCG00034601001;Name=Cc10_g06880 | |
| 40344 chr10 manual_curation mRNA 5703230 5704180 . + . ID=GSCOCT00034601001;Parent=GSCOCG00034601001;Name=Cc10_g06880 | |
| 40345 chr10 manual_curation polypeptide 5703230 5704180 . + . ID=GSCOCP00034601001;Dbxref=InterPro:IPR006766,PFAM:PF04674,TAIR:AT1G35140.1,TAIR:AT4G08950.1,TAIR:AT5G64260.1,TrEMBL:A5AG34,TrEMBL:B8AIT6,TrEMBL:B9RJM1;Derives_from=GSCOCT00034601001;Name=Cc10_g06880;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Phosphate-responsive 1 family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034601001~ Phosphate-responsive 1 family protein~ unknown_gene~ complete;original_location=complement(3357022..3357972);owner=coffea | |
| 40346 chr10 manual_curation exon 5703230 5704180 . + . Parent=GSCOCT00034601001 | |
| 40347 chr10 manual_curation CDS 5703230 5704180 . + 0 Parent=GSCOCT00034601001 | |
| 40348 chr10 manual_curation gene 5707950 5709976 . - . ID=GSCOCG00034600001;Name=Cc10_g06890 | |
| 40349 chr10 manual_curation mRNA 5707950 5709976 . - . ID=GSCOCT00034600001;Parent=GSCOCG00034600001;Name=Cc10_g06890 | |
| 40350 chr10 manual_curation polypeptide 5707950 5709976 . - . ID=GSCOCP00034600001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,PROSITE:PS00375,SwissProt:Q9LME8,SwissProt:Q9SK82,SwissProt:Q9ZWJ3,TAIR:AT1G22340.1,TAIR:AT1G22360.1,TAIR:AT1G22400.1,TrEMBL:B6EWX9,TrEMBL:F8WKW1,TrEMBL:F8WLS6;Derives_from=GSCOCT00034600001;Name=Cc10_g06890;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:UDP-glycosyltransferase 85A1,CC_functional_completeness:complete,CC_gene:UGT85A1,CC_gene:UGT85A7,CC_gene:UGT85A2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034600001~ UDP-glycosyltransferase 85A1~ UGT85A1~ complete;original_location=join(3351226..3351745%2C3352327..3353252);owner=coffea | |
| 40351 chr10 manual_curation exon 5709457 5709976 . - . Parent=GSCOCT00034600001 | |
| 40352 chr10 manual_curation exon 5707950 5708875 . - . Parent=GSCOCT00034600001 | |
| 40353 chr10 manual_curation CDS 5709457 5709976 . - 0 Parent=GSCOCT00034600001 | |
| 40354 chr10 manual_curation CDS 5707950 5708875 . - 1 Parent=GSCOCT00034600001 | |
| 40355 chr10 manual_curation gene 5806742 5806933 . - . ID=GSCOCG00034597001;Name=Cc10_g06900 | |
| 40356 chr10 manual_curation mRNA 5806742 5806933 . - . ID=GSCOCT00034597001;Parent=GSCOCG00034597001;Name=Cc10_g06900 | |
| 40357 chr10 manual_curation polypeptide 5806742 5806933 . - . ID=GSCOCP00034597001;Dbxref=TAIR:AT1G22340.1,TAIR:AT1G22380.1,TrEMBL:B9HDF5,TrEMBL:B9SVU6,TrEMBL:F6H0R7;Derives_from=GSCOCT00034597001;Name=Cc10_g06900;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:UDP-glucosyl transferase 85A7,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034597001~ UDP-glucosyl transferase 85A7~ unknown_gene~ fragment;original_location=3254269..3254460;owner=coffea | |
| 40358 chr10 manual_curation exon 5806742 5806933 . - . Parent=GSCOCT00034597001 | |
| 40359 chr10 manual_curation CDS 5806742 5806933 . - 0 Parent=GSCOCT00034597001 | |
| 40360 chr10 manual_curation gene 5807019 5808820 . - . ID=GSCOCG00034596001;Name=Cc10_g06910 | |
| 40361 chr10 manual_curation mRNA 5807019 5808820 . - . ID=GSCOCT00034596001;Parent=GSCOCG00034596001;Name=Cc10_g06910 | |
| 40362 chr10 manual_curation polypeptide 5807019 5808820 . - . ID=GSCOCP00034596001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,PROSITE:PS00375,SwissProt:Q9LMF1,SwissProt:Q9SK82,SwissProt:Q9ZWJ3,TAIR:AT1G22360.1,TAIR:AT1G22380.1,TAIR:AT1G22400.1,TrEMBL:B6EWX9,TrEMBL:F8WKW1,TrEMBL:F8WLS6;Derives_from=GSCOCT00034596001;Name=Cc10_g06910;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:UDP-glycosyltransferase 85A1,CC_functional_completeness:complete,CC_gene:UGT85A1,CC_gene:UGT85A2,CC_gene:UGT85A3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034596001~ UDP-glycosyltransferase 85A1~ UGT85A1~ complete;original_location=join(3252382..3252553%2C3252596..3252901%2C3253259..3253729%2C3253822..3254183);owner=coffea | |
| 40363 chr10 manual_curation exon 5808649 5808820 . - . Parent=GSCOCT00034596001 | |
| 40364 chr10 manual_curation exon 5808301 5808606 . - . Parent=GSCOCT00034596001 | |
| 40365 chr10 manual_curation exon 5807473 5807943 . - . Parent=GSCOCT00034596001 | |
| 40366 chr10 manual_curation exon 5807019 5807380 . - . Parent=GSCOCT00034596001 | |
| 40367 chr10 manual_curation CDS 5808649 5808820 . - 0 Parent=GSCOCT00034596001 | |
| 40368 chr10 manual_curation CDS 5808301 5808606 . - 1 Parent=GSCOCT00034596001 | |
| 40369 chr10 manual_curation CDS 5807473 5807943 . - 1 Parent=GSCOCT00034596001 | |
| 40370 chr10 manual_curation CDS 5807019 5807380 . - 1 Parent=GSCOCT00034596001 | |
| 40371 chr10 manual_curation gene 5823517 5823651 . - . ID=GSCOCG00034595001;Name=Cc10_g06920 | |
| 40372 chr10 manual_curation mRNA 5823517 5823651 . - . ID=GSCOCT00034595001;Parent=GSCOCG00034595001;Name=Cc10_g06920 | |
| 40373 chr10 manual_curation polypeptide 5823517 5823651 . - . ID=GSCOCP00034595001;Derives_from=GSCOCT00034595001;Name=Cc10_g06920;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034595001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=3237551..3237685;owner=coffea | |
| 40374 chr10 manual_curation exon 5823517 5823651 . - . Parent=GSCOCT00034595001 | |
| 40375 chr10 manual_curation CDS 5823517 5823651 . - 0 Parent=GSCOCT00034595001 | |
| 40376 chr10 manual_curation gene 5823736 5827160 . - . ID=GSCOCG00034594001;Name=Cc10_g06930 | |
| 40377 chr10 manual_curation mRNA 5823736 5827160 . - . ID=GSCOCT00034594001;Parent=GSCOCG00034594001;Name=Cc10_g06930 | |
| 40378 chr10 manual_curation polypeptide 5823736 5827160 . - . ID=GSCOCP00034594001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,SwissProt:Q9LMF1,SwissProt:Q9SK82,SwissProt:Q9ZWJ3,TAIR:AT1G22360.1,TAIR:AT1G22380.1,TAIR:AT1G22400.1,TrEMBL:B6EWX9,TrEMBL:F8WKW1,TrEMBL:F8WLS6;Derives_from=GSCOCT00034594001;Name=Cc10_g06930;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:Putative UDP-glycosyltransferase 85A3,CC_functional_completeness:complete,CC_gene:UGT85A3,CC_gene:UGT85A2,CC_gene:UGT85A1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034594001~ Putative UDP-glycosyltransferase 85A3~ UGT85A3~ complete;original_location=join(3234042..3234342%2C3234470..3234574%2C3234926..3235295%2C3235339..3235430%2C3237193..3237212%2C3237281..3237466);owner=coffea | |
| 40379 chr10 manual_curation exon 5826860 5827160 . - . Parent=GSCOCT00034594001 | |
| 40380 chr10 manual_curation exon 5826628 5826732 . - . Parent=GSCOCT00034594001 | |
| 40381 chr10 manual_curation exon 5825907 5826276 . - . Parent=GSCOCT00034594001 | |
| 40382 chr10 manual_curation exon 5825772 5825863 . - . Parent=GSCOCT00034594001 | |
| 40383 chr10 manual_curation exon 5823990 5824009 . - . Parent=GSCOCT00034594001 | |
| 40384 chr10 manual_curation exon 5823736 5823921 . - . Parent=GSCOCT00034594001 | |
| 40385 chr10 manual_curation CDS 5826860 5827160 . - 0 Parent=GSCOCT00034594001 | |
| 40386 chr10 manual_curation CDS 5826628 5826732 . - 1 Parent=GSCOCT00034594001 | |
| 40387 chr10 manual_curation CDS 5825907 5826276 . - 1 Parent=GSCOCT00034594001 | |
| 40388 chr10 manual_curation CDS 5825772 5825863 . - 2 Parent=GSCOCT00034594001 | |
| 40389 chr10 manual_curation CDS 5823990 5824009 . - 1 Parent=GSCOCT00034594001 | |
| 40390 chr10 manual_curation CDS 5823736 5823921 . - 0 Parent=GSCOCT00034594001 | |
| 40391 chr10 manual_curation gene 5833694 5854784 . - . ID=GSCOCG00034593001;Name=Cc10_g06940 | |
| 40392 chr10 manual_curation mRNA 5833694 5854784 . - . ID=GSCOCT00034593001;Parent=GSCOCG00034593001;Name=Cc10_g06940 | |
| 40393 chr10 manual_curation polypeptide 5833694 5854784 . - . ID=GSCOCP00034593001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,PROSITE:PS00375,SwissProt:Q9LMF1,SwissProt:Q9SK82,SwissProt:Q9ZWJ3,TAIR:AT1G22360.1,TAIR:AT1G22380.1,TAIR:AT1G22400.1,TrEMBL:B6EWX9,TrEMBL:F8WKW1,TrEMBL:Q589Y1;Derives_from=GSCOCT00034593001;Name=Cc10_g06940;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:UDP-glycosyltransferase 85A1,CC_functional_completeness:modules,CC_gene:UGT85A1,CC_gene:UGT85A2,CC_gene:UGT85A3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034593001~ UDP-glycosyltransferase 85A1~ UGT85A1~ modules;original_location=join(3206418..3206937%2C3207274..3208191%2C3226988..3227508);owner=coffea | |
| 40394 chr10 manual_curation exon 5854265 5854784 . - . Parent=GSCOCT00034593001 | |
| 40395 chr10 manual_curation exon 5853011 5853928 . - . Parent=GSCOCT00034593001 | |
| 40396 chr10 manual_curation exon 5833694 5834214 . - . Parent=GSCOCT00034593001 | |
| 40397 chr10 manual_curation CDS 5854265 5854784 . - 0 Parent=GSCOCT00034593001 | |
| 40398 chr10 manual_curation CDS 5853011 5853928 . - 1 Parent=GSCOCT00034593001 | |
| 40399 chr10 manual_curation CDS 5833694 5834214 . - 1 Parent=GSCOCT00034593001 | |
| 40400 chr10 manual_curation gene 5857205 5860385 . - . ID=GSCOCG00034592001;Name=Cc10_g06950 | |
| 40401 chr10 manual_curation mRNA 5857205 5860385 . - . ID=GSCOCT00034592001;Parent=GSCOCG00034592001;Name=Cc10_g06950 | |
| 40402 chr10 manual_curation polypeptide 5857205 5860385 . - . ID=GSCOCP00034592001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,SwissProt:Q9LMF0,SwissProt:Q9LMF1,SwissProt:Q9ZWJ3,TAIR:AT1G22360.1,TAIR:AT1G22370.2,TAIR:AT1G22380.1,TrEMBL:B6EWX9,TrEMBL:F8WKW1,TrEMBL:F8WLS6;Derives_from=GSCOCT00034592001;Name=Cc10_g06950;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:Putative UDP-glycosyltransferase 85A3,CC_functional_completeness:fragment,CC_gene:UGT85A3,CC_gene:UGT85A5,CC_gene:UGT85A2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034592001~ Putative UDP-glycosyltransferase 85A3~ UGT85A3~ fragment;original_location=join(3200817..3201180%2C3201405..3201457%2C3201975..3202002%2C3202185..3202246%2C3203812..3203997);owner=coffea | |
| 40403 chr10 manual_curation exon 5860022 5860385 . - . Parent=GSCOCT00034592001 | |
| 40404 chr10 manual_curation exon 5859745 5859797 . - . Parent=GSCOCT00034592001 | |
| 40405 chr10 manual_curation exon 5859200 5859227 . - . Parent=GSCOCT00034592001 | |
| 40406 chr10 manual_curation exon 5858956 5859017 . - . Parent=GSCOCT00034592001 | |
| 40407 chr10 manual_curation exon 5857205 5857390 . - . Parent=GSCOCT00034592001 | |
| 40408 chr10 manual_curation CDS 5860022 5860385 . - 0 Parent=GSCOCT00034592001 | |
| 40409 chr10 manual_curation CDS 5859745 5859797 . - 1 Parent=GSCOCT00034592001 | |
| 40410 chr10 manual_curation CDS 5859200 5859227 . - 0 Parent=GSCOCT00034592001 | |
| 40411 chr10 manual_curation CDS 5858956 5859017 . - 1 Parent=GSCOCT00034592001 | |
| 40412 chr10 manual_curation CDS 5857205 5857390 . - 0 Parent=GSCOCT00034592001 | |
| 40413 chr10 manual_curation gene 5865369 5867467 . - . ID=GSCOCG00034591001;Name=Cc10_g06960 | |
| 40414 chr10 manual_curation mRNA 5865369 5867467 . - . ID=GSCOCT00034591001;Parent=GSCOCG00034591001;Name=Cc10_g06960 | |
| 40415 chr10 manual_curation polypeptide 5865649 5866928 . - . ID=GSCOCP00034591001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,SwissProt:Q9LMF1,SwissProt:Q9SK82,SwissProt:Q9ZWJ3,TAIR:AT1G22360.1,TAIR:AT1G22380.1,TAIR:AT1G22400.1,TrEMBL:B6EWX9,TrEMBL:F8WKW1,TrEMBL:I1LVX5;Derives_from=GSCOCT00034591001;Name=Cc10_g06960;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:UDP-glycosyltransferase 85A1,CC_functional_completeness:fragment,CC_gene:UGT85A1,CC_gene:UGT85A3,CC_gene:UGT85A2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034591001~ UDP-glycosyltransferase 85A1~ UGT85A1~ fragment;original_location=join(3194274..3194406%2C3194595..3195144%2C3195214..3195320%2C3195363..3195553);owner=coffea | |
| 40416 chr10 manual_curation exon 5866796 5867467 . - . Parent=GSCOCT00034591001 | |
| 40417 chr10 manual_curation exon 5866058 5866607 . - . Parent=GSCOCT00034591001 | |
| 40418 chr10 manual_curation exon 5865882 5865988 . - . Parent=GSCOCT00034591001 | |
| 40419 chr10 manual_curation exon 5865369 5865839 . - . Parent=GSCOCT00034591001 | |
| 40420 chr10 manual_curation CDS 5866796 5866928 . - 0 Parent=GSCOCT00034591001 | |
| 40421 chr10 manual_curation CDS 5866058 5866607 . - 1 Parent=GSCOCT00034591001 | |
| 40422 chr10 manual_curation CDS 5865882 5865988 . - 2 Parent=GSCOCT00034591001 | |
| 40423 chr10 manual_curation CDS 5865649 5865839 . - 1 Parent=GSCOCT00034591001 | |
| 40424 chr10 manual_curation gene 5872187 5874230 . - . ID=GSCOCG00034589001;Name=Cc10_g06970 | |
| 40425 chr10 manual_curation mRNA 5872187 5874230 . - . ID=GSCOCT00034589001;Parent=GSCOCG00034589001;Name=Cc10_g06970 | |
| 40426 chr10 manual_curation polypeptide 5872415 5874048 . - . ID=GSCOCP00034589001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,PROSITE:PS00375,SwissProt:Q9LMF1,SwissProt:Q9SK82,SwissProt:Q9ZWJ3,TAIR:AT1G22360.1,TAIR:AT1G22380.1,TAIR:AT1G22400.1,TrEMBL:B6EWX9,TrEMBL:F8WKW1,TrEMBL:F8WLS6;Derives_from=GSCOCT00034589001;Name=Cc10_g06970;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:UDP-glycosyltransferase 85A1,CC_functional_completeness:complete,CC_gene:UGT85A1,CC_gene:UGT85A3,CC_gene:UGT85A2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034589001~ UDP-glycosyltransferase 85A1~ UGT85A1~ complete;original_location=join(3187154..3187673%2C3187862..3188787);owner=coffea | |
| 40427 chr10 manual_curation exon 5873529 5874230 . - . Parent=GSCOCT00034589001 | |
| 40428 chr10 manual_curation exon 5872187 5873340 . - . Parent=GSCOCT00034589001 | |
| 40429 chr10 manual_curation CDS 5873529 5874048 . - 0 Parent=GSCOCT00034589001 | |
| 40430 chr10 manual_curation CDS 5872415 5873340 . - 1 Parent=GSCOCT00034589001 | |
| 40431 chr10 manual_curation gene 5881637 5883456 . + . ID=GSCOCG00034588001;Name=Cc10_g06980 | |
| 40432 chr10 manual_curation mRNA 5881637 5883456 . + . ID=GSCOCT00034588001;Parent=GSCOCG00034588001;Name=Cc10_g06980 | |
| 40433 chr10 manual_curation polypeptide 5881637 5883456 . + . ID=GSCOCP00034588001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,PROSITE:PS00375,SwissProt:Q9LMF1,SwissProt:Q9SK82,SwissProt:Q9ZWJ3,TAIR:AT1G22360.1,TAIR:AT1G22380.1,TAIR:AT1G22400.1,TrEMBL:B6EWX9,TrEMBL:F8WKW1,TrEMBL:F8WLS6;Derives_from=GSCOCT00034588001;Name=Cc10_g06980;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:UDP-glycosyltransferase 85A1,CC_functional_completeness:complete,CC_gene:UGT85A1,CC_gene:UGT85A3,CC_gene:UGT85A2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034588001~ UDP-glycosyltransferase 85A1~ UGT85A1~ complete;original_location=complement(join(3179046..3179565%2C3177746..3178731));owner=coffea | |
| 40434 chr10 manual_curation exon 5882471 5883456 . + . Parent=GSCOCT00034588001 | |
| 40435 chr10 manual_curation exon 5881637 5882156 . + . Parent=GSCOCT00034588001 | |
| 40436 chr10 manual_curation CDS 5882471 5883456 . + 1 Parent=GSCOCT00034588001 | |
| 40437 chr10 manual_curation CDS 5881637 5882156 . + 0 Parent=GSCOCT00034588001 | |
| 40438 chr10 manual_curation gene 5884266 5885015 . + . ID=GSCOCG00034587001;Name=Cc10_g06990 | |
| 40439 chr10 manual_curation mRNA 5884266 5885015 . + . ID=GSCOCT00034587001;Parent=GSCOCG00034587001;Name=Cc10_g06990 | |
| 40440 chr10 manual_curation polypeptide 5884266 5885015 . + . ID=GSCOCP00034587001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,PANTHER:PTHR19383,PFAM:PF00067,SUPERFAMILY:SSF48264,SwissProt:O65790,SwissProt:P93147,SwissProt:Q9FG65,TAIR:AT4G37360.1,TAIR:AT4G37370.1,TAIR:AT5G36220.1,TrEMBL:B9R747,TrEMBL:B9SG23,TrEMBL:Q9SZT6;Derives_from=GSCOCT00034587001;Name=Cc10_g06990;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,CC_EC_number:1.14.13.89,PRODUCT:Putative Cytochrome P450 81D1,CC_functional_completeness:fragment,CC_gene:CYP81D1,CC_gene:CYP81F1,CC_gene:CYP81E1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034587001~ Putative Cytochrome P450 81D1~ CYP81D1~ fragment;original_location=complement(join(3176877..3176936%2C3176759..3176791%2C3176187..3176405));owner=coffea | |
| 40441 chr10 manual_curation exon 5884797 5885015 . + . Parent=GSCOCT00034587001 | |
| 40442 chr10 manual_curation exon 5884411 5884443 . + . Parent=GSCOCT00034587001 | |
| 40443 chr10 manual_curation exon 5884266 5884325 . + . Parent=GSCOCT00034587001 | |
| 40444 chr10 manual_curation CDS 5884797 5885015 . + 0 Parent=GSCOCT00034587001 | |
| 40445 chr10 manual_curation CDS 5884411 5884443 . + 0 Parent=GSCOCT00034587001 | |
| 40446 chr10 manual_curation CDS 5884266 5884325 . + 0 Parent=GSCOCT00034587001 | |
| 40447 chr10 manual_curation gene 5891944 5893670 . + . ID=GSCOCG00034585001;Name=Cc10_g07000 | |
| 40448 chr10 manual_curation mRNA 5891944 5893670 . + . ID=GSCOCT00034585001;Parent=GSCOCG00034585001;Name=Cc10_g07000 | |
| 40449 chr10 manual_curation polypeptide 5891944 5893606 . + . ID=GSCOCP00034585001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,PROSITE:PS00375,SwissProt:Q9LMF1,SwissProt:Q9SK82,SwissProt:Q9ZWJ3,TAIR:AT1G22360.1,TAIR:AT1G22380.1,TAIR:AT1G22400.1,TrEMBL:B6EWX9,TrEMBL:F8WKW1,TrEMBL:F8WLS6;Derives_from=GSCOCT00034585001;Name=Cc10_g07000;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:UDP-glycosyltransferase 85A2,CC_functional_completeness:complete,CC_gene:UGT85A2,CC_gene:UGT85A1,CC_gene:UGT85A3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034585001~ UDP-glycosyltransferase 85A2~ UGT85A2~ complete;original_location=complement(join(3168742..3169258%2C3167596..3168524));owner=coffea | |
| 40450 chr10 manual_curation exon 5892678 5893670 . + . Parent=GSCOCT00034585001 | |
| 40451 chr10 manual_curation exon 5891944 5892460 . + . Parent=GSCOCT00034585001 | |
| 40452 chr10 manual_curation CDS 5892678 5893606 . + 1 Parent=GSCOCT00034585001 | |
| 40453 chr10 manual_curation CDS 5891944 5892460 . + 0 Parent=GSCOCT00034585001 | |
| 40454 chr10 manual_curation gene 5914082 5914965 . + . ID=GSCOCG00034584001;Name=Cc10_g07010 | |
| 40455 chr10 manual_curation mRNA 5914082 5914965 . + . ID=GSCOCT00034584001;Parent=GSCOCG00034584001;Name=Cc10_g07010 | |
| 40456 chr10 manual_curation polypeptide 5914082 5914965 . + . ID=GSCOCP00034584001;Dbxref=InterPro:IPR001611,PFAM:PF00560,SwissProt:C0LGD7,SwissProt:C0LGU1,SwissProt:Q9LFG1,TAIR:AT1G06840.1,TAIR:AT3G53590.1,TAIR:AT5G01950.1,TrEMBL:G7IV56,TrEMBL:I1NVF0,TrEMBL:Q5JN27;Derives_from=GSCOCT00034584001;Name=Cc10_g07010;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:At1g06840,CC_gene:At3g53590,CC_gene:At5g37450;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034584001~ Hypothetical protein~ At1g06840~ missing_functional_completeness;original_location=complement(join(3146933..3147120%2C3146708..3146779%2C3146237..3146606));owner=coffea | |
| 40457 chr10 manual_curation exon 5914596 5914965 . + . Parent=GSCOCT00034584001 | |
| 40458 chr10 manual_curation exon 5914423 5914494 . + . Parent=GSCOCT00034584001 | |
| 40459 chr10 manual_curation exon 5914082 5914269 . + . Parent=GSCOCT00034584001 | |
| 40460 chr10 manual_curation CDS 5914596 5914965 . + 2 Parent=GSCOCT00034584001 | |
| 40461 chr10 manual_curation CDS 5914423 5914494 . + 2 Parent=GSCOCT00034584001 | |
| 40462 chr10 manual_curation CDS 5914082 5914269 . + 0 Parent=GSCOCT00034584001 | |
| 40463 chr10 manual_curation gene 5917213 5922017 . + . ID=GSCOCG00034583001;Name=Cc10_g07020 | |
| 40464 chr10 manual_curation mRNA 5917213 5922017 . + . ID=GSCOCT00034583001;Parent=GSCOCG00034583001;Name=Cc10_g07020 | |
| 40465 chr10 manual_curation polypeptide 5917213 5922017 . + . ID=GSCOCP00034583001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:C0LGD7,SwissProt:C0LGU1,SwissProt:Q9LFG1,TAIR:AT1G06840.1,TAIR:AT5G01950.1,TAIR:AT5G37450.1,TrEMBL:B9INK0,TrEMBL:D7KG71,TrEMBL:F6GU73;Derives_from=GSCOCT00034583001;Name=Cc10_g07020;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Probable LRR receptor-like serine/threonine-protein kinase At1g06840,CC_functional_completeness:fragment,CC_gene:At1g06840,CC_gene:At3g53590,CC_gene:At5g37450;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034583001~ Probable LRR receptor-like serine/threonine-protein kinase At1g06840~ At1g06840~ fragment;original_location=complement(join(3143856..3143989%2C3143602..3143688%2C3143274..3143342%2C3142587..3143120%2C3141514..3141641%2C3140784..3141067%2C3140310..3140361%2C3139646..3139896%2C3139185..3139352));owner=coffea | |
| 40466 chr10 manual_curation exon 5921850 5922017 . + . Parent=GSCOCT00034583001 | |
| 40467 chr10 manual_curation exon 5921306 5921556 . + . Parent=GSCOCT00034583001 | |
| 40468 chr10 manual_curation exon 5920841 5920892 . + . Parent=GSCOCT00034583001 | |
| 40469 chr10 manual_curation exon 5920135 5920418 . + . Parent=GSCOCT00034583001 | |
| 40470 chr10 manual_curation exon 5919561 5919688 . + . Parent=GSCOCT00034583001 | |
| 40471 chr10 manual_curation exon 5918082 5918615 . + . Parent=GSCOCT00034583001 | |
| 40472 chr10 manual_curation exon 5917860 5917928 . + . Parent=GSCOCT00034583001 | |
| 40473 chr10 manual_curation exon 5917514 5917600 . + . Parent=GSCOCT00034583001 | |
| 40474 chr10 manual_curation exon 5917213 5917346 . + . Parent=GSCOCT00034583001 | |
| 40475 chr10 manual_curation CDS 5921850 5922017 . + 0 Parent=GSCOCT00034583001 | |
| 40476 chr10 manual_curation CDS 5921306 5921556 . + 1 Parent=GSCOCT00034583001 | |
| 40477 chr10 manual_curation CDS 5920841 5920892 . + 0 Parent=GSCOCT00034583001 | |
| 40478 chr10 manual_curation CDS 5920135 5920418 . + 1 Parent=GSCOCT00034583001 | |
| 40479 chr10 manual_curation CDS 5919561 5919688 . + 2 Parent=GSCOCT00034583001 | |
| 40480 chr10 manual_curation CDS 5918082 5918615 . + 2 Parent=GSCOCT00034583001 | |
| 40481 chr10 manual_curation CDS 5917860 5917928 . + 2 Parent=GSCOCT00034583001 | |
| 40482 chr10 manual_curation CDS 5917514 5917600 . + 2 Parent=GSCOCT00034583001 | |
| 40483 chr10 manual_curation CDS 5917213 5917346 . + 0 Parent=GSCOCT00034583001 | |
| 40484 chr10 manual_curation gene 5925742 5927737 . - . ID=GSCOCG00034580001;Name=Cc10_g07030 | |
| 40485 chr10 manual_curation mRNA 5925742 5927737 . - . ID=GSCOCT00034580001;Parent=GSCOCG00034580001;Name=Cc10_g07030 | |
| 40486 chr10 manual_curation polypeptide 5925991 5927641 . - . ID=GSCOCP00034580001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,SwissProt:Q9LMF1,SwissProt:Q9SK82,SwissProt:Q9ZWJ3,TAIR:AT1G22360.1,TAIR:AT1G22380.1,TAIR:AT1G22400.1,TrEMBL:B9GUX6,TrEMBL:B9GUX7,TrEMBL:F6H0R6;Derives_from=GSCOCT00034580001;Name=Cc10_g07030;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:UDP-glycosyltransferase 85A3,CC_functional_completeness:complete,CC_gene:UGT85A3,CC_gene:UGT85A1,CC_gene:UGT85A2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034580001~ UDP-glycosyltransferase 85A3~ UGT85A3~ complete;original_location=join(3133561..3134077%2C3134268..3135211);owner=coffea | |
| 40487 chr10 manual_curation exon 5927125 5927737 . - . Parent=GSCOCT00034580001 | |
| 40488 chr10 manual_curation exon 5925742 5926934 . - . Parent=GSCOCT00034580001 | |
| 40489 chr10 manual_curation CDS 5927125 5927641 . - 0 Parent=GSCOCT00034580001 | |
| 40490 chr10 manual_curation CDS 5925991 5926934 . - 1 Parent=GSCOCT00034580001 | |
| 40491 chr10 manual_curation gene 5949249 5951155 . - . ID=GSCOCG00034576001;Name=Cc10_g07040 | |
| 40492 chr10 manual_curation mRNA 5949249 5951155 . - . ID=GSCOCT00034576001;Parent=GSCOCG00034576001;Name=Cc10_g07040 | |
| 40493 chr10 manual_curation polypeptide 5949504 5951155 . - . ID=GSCOCP00034576001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,SwissProt:Q9LMF1,SwissProt:Q9SK82,SwissProt:Q9ZWJ3,TAIR:AT1G22360.1,TAIR:AT1G22380.1,TAIR:AT1G22400.1,TrEMBL:B9GUX6,TrEMBL:B9GUX7,TrEMBL:F6H0Q7;Derives_from=GSCOCT00034576001;Name=Cc10_g07040;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:UDP-glycosyltransferase 85A2,CC_functional_completeness:fragment,CC_gene:UGT85A2,CC_gene:UGT85A3,CC_gene:UGT85A1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034576001~ UDP-glycosyltransferase 85A2~ UGT85A2~ fragment;original_location=join(3110047..3110563%2C3110755..3111300%2C3111523..3111698);owner=coffea | |
| 40494 chr10 manual_curation exon 5950639 5951155 . - . Parent=GSCOCT00034576001 | |
| 40495 chr10 manual_curation exon 5949902 5950447 . - . Parent=GSCOCT00034576001 | |
| 40496 chr10 manual_curation exon 5949249 5949679 . - . Parent=GSCOCT00034576001 | |
| 40497 chr10 manual_curation CDS 5950639 5951155 . - 0 Parent=GSCOCT00034576001 | |
| 40498 chr10 manual_curation CDS 5949902 5950447 . - 1 Parent=GSCOCT00034576001 | |
| 40499 chr10 manual_curation CDS 5949504 5949679 . - 1 Parent=GSCOCT00034576001 | |
| 40500 chr10 manual_curation gene 5955924 5956914 . - . ID=GSCOCG00034575001;Name=Cc10_g07050 | |
| 40501 chr10 manual_curation mRNA 5955924 5956914 . - . ID=GSCOCT00034575001;Parent=GSCOCG00034575001;Name=Cc10_g07050 | |
| 40502 chr10 manual_curation polypeptide 5955924 5956914 . - . ID=GSCOCP00034575001;Dbxref=InterPro:IPR007087,PROFILE:PS50157,SwissProt:Q8VWG3,SwissProt:Q943I6,SwissProt:Q9C8N5,TAIR:AT1G34790.1,TAIR:AT3G20880.1,TAIR:AT3G57670.1,TrEMBL:A5AQU8,TrEMBL:B9RJL7,TrEMBL:Q700E7;Derives_from=GSCOCT00034575001;Name=Cc10_g07050;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:TRANSPARENT TESTA 1 protein%2C putative,CC_functional_completeness:complete,CC_gene:TT1,CC_gene:STOP1,CC_gene:Os01g0871200;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034575001~ TRANSPARENT TESTA 1 protein%2C putative~ TT1~ complete;original_location=join(3104288..3104695%2C3104829..3105278);owner=coffea | |
| 40503 chr10 manual_curation exon 5956507 5956914 . - . Parent=GSCOCT00034575001 | |
| 40504 chr10 manual_curation exon 5955924 5956373 . - . Parent=GSCOCT00034575001 | |
| 40505 chr10 manual_curation CDS 5956507 5956914 . - 0 Parent=GSCOCT00034575001 | |
| 40506 chr10 manual_curation CDS 5955924 5956373 . - 0 Parent=GSCOCT00034575001 | |
| 40507 chr10 manual_curation gene 5959042 5965929 . - . ID=GSCOCG00034574001;Name=Cc10_g07060 | |
| 40508 chr10 manual_curation mRNA 5959042 5965929 . - . ID=GSCOCT00034574001;Parent=GSCOCG00034574001;Name=Cc10_g07060 | |
| 40509 chr10 manual_curation polypeptide 5959042 5965733 . - . ID=GSCOCP00034574001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR012677,PFAM:PF00076,PROFILE:PS50102,SMART:SM00360,SwissProt:Q76LC6,SwissProt:Q9BX46,SwissProt:Q9I8B3,TAIR:AT1G22330.1,TAIR:AT1G76460.1,TAIR:AT1G78260.1,TrEMBL:E0CRL7,TrEMBL:I1LVX9,TrEMBL:I1MAU7;Derives_from=GSCOCT00034574001;Name=Cc10_g07060;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,CC_EC_number:missing_EC_number,PRODUCT:RNA-binding (RRM/RBD/RNP motifs) family protein,CC_functional_completeness:complete,CC_gene:rbm24,CC_gene:rbm24-b,CC_gene:RBM24;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034574001~ RNA-binding (RRM/RBD/RNP motifs) family protein~ rbm24~ complete;original_location=join(3095469..3095651%2C3095755..3095878%2C3096016..3096154%2C3098794..3098830%2C3099093..3099369%2C3102078..3102160);owner=coffea | |
| 40510 chr10 manual_curation exon 5965551 5965929 . - . Parent=GSCOCT00034574001 | |
| 40511 chr10 manual_curation exon 5965324 5965447 . - . Parent=GSCOCT00034574001 | |
| 40512 chr10 manual_curation exon 5965048 5965186 . - . Parent=GSCOCT00034574001 | |
| 40513 chr10 manual_curation exon 5962372 5962408 . - . Parent=GSCOCT00034574001 | |
| 40514 chr10 manual_curation exon 5961833 5962109 . - . Parent=GSCOCT00034574001 | |
| 40515 chr10 manual_curation exon 5959042 5959124 . - . Parent=GSCOCT00034574001 | |
| 40516 chr10 manual_curation CDS 5965551 5965733 . - 0 Parent=GSCOCT00034574001 | |
| 40517 chr10 manual_curation CDS 5965324 5965447 . - 0 Parent=GSCOCT00034574001 | |
| 40518 chr10 manual_curation CDS 5965048 5965186 . - 1 Parent=GSCOCT00034574001 | |
| 40519 chr10 manual_curation CDS 5962372 5962408 . - 2 Parent=GSCOCT00034574001 | |
| 40520 chr10 manual_curation CDS 5961833 5962109 . - 0 Parent=GSCOCT00034574001 | |
| 40521 chr10 manual_curation CDS 5959042 5959124 . - 1 Parent=GSCOCT00034574001 | |
| 40522 chr10 manual_curation gene 5991234 5998468 . + . ID=GSCOCG00034570001;Name=Cc10_g07070 | |
| 40523 chr10 manual_curation mRNA 5991234 5998468 . + . ID=GSCOCT00034570001;Parent=GSCOCG00034570001;Name=Cc10_g07070 | |
| 40524 chr10 manual_curation polypeptide 5992369 5997936 . + . ID=GSCOCP00034570001;Dbxref=InterPro:IPR004159,PFAM:PF03141,SwissProt:Q3EC77,SwissProt:Q8GYW9,SwissProt:Q9C9Q8,TAIR:AT1G13860.4,TAIR:AT1G78240.1,TAIR:AT2G03480.1,TrEMBL:E0CRL6,TrEMBL:I1JVD1,TrEMBL:I1K9X5;Derives_from=GSCOCT00034570001;Name=Cc10_g07070;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Probable pectin methyltransferase QUA2,CC_functional_completeness:complete,CC_gene:QUA2,CC_gene:At1g13860,CC_gene:At2g03480;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034570001~ Probable pectin methyltransferase QUA2~ QUA2~ complete;original_location=complement(join(3068812..3068833%2C3068112..3068802%2C3067871..3068003%2C3066893..3067133%2C3065343..3065568%2C3064966..3065141%2C3064464..3064767%2C3063799..3063937%2C3063266..3063424));owner=coffea | |
| 40525 chr10 manual_curation exon 5991900 5992041 . + . Parent=GSCOCT00034570001 | |
| 40526 chr10 manual_curation exon 5991234 5991814 . + . Parent=GSCOCT00034570001 | |
| 40527 chr10 manual_curation exon 5997778 5998468 . + . Parent=GSCOCT00034570001 | |
| 40528 chr10 manual_curation exon 5997265 5997403 . + . Parent=GSCOCT00034570001 | |
| 40529 chr10 manual_curation exon 5996435 5996738 . + . Parent=GSCOCT00034570001 | |
| 40530 chr10 manual_curation exon 5996061 5996236 . + . Parent=GSCOCT00034570001 | |
| 40531 chr10 manual_curation exon 5995634 5995859 . + . Parent=GSCOCT00034570001 | |
| 40532 chr10 manual_curation exon 5994069 5994309 . + . Parent=GSCOCT00034570001 | |
| 40533 chr10 manual_curation exon 5993199 5993331 . + . Parent=GSCOCT00034570001 | |
| 40534 chr10 manual_curation exon 5992400 5993090 . + . Parent=GSCOCT00034570001 | |
| 40535 chr10 manual_curation exon 5992351 5992390 . + . Parent=GSCOCT00034570001 | |
| 40536 chr10 manual_curation CDS 5997778 5997936 . + 0 Parent=GSCOCT00034570001 | |
| 40537 chr10 manual_curation CDS 5997265 5997403 . + 2 Parent=GSCOCT00034570001 | |
| 40538 chr10 manual_curation CDS 5996435 5996738 . + 1 Parent=GSCOCT00034570001 | |
| 40539 chr10 manual_curation CDS 5996061 5996236 . + 2 Parent=GSCOCT00034570001 | |
| 40540 chr10 manual_curation CDS 5995634 5995859 . + 1 Parent=GSCOCT00034570001 | |
| 40541 chr10 manual_curation CDS 5994069 5994309 . + 0 Parent=GSCOCT00034570001 | |
| 40542 chr10 manual_curation CDS 5993199 5993331 . + 2 Parent=GSCOCT00034570001 | |
| 40543 chr10 manual_curation CDS 5992400 5993090 . + 1 Parent=GSCOCT00034570001 | |
| 40544 chr10 manual_curation CDS 5992369 5992390 . + 0 Parent=GSCOCT00034570001 | |
| 40545 chr10 manual_curation gene 5999878 6001119 . + . ID=GSCOCG00034568001;Name=Cc10_g07080 | |
| 40546 chr10 manual_curation mRNA 5999878 6001119 . + . ID=GSCOCT00034568001;Parent=GSCOCG00034568001;Name=Cc10_g07080 | |
| 40547 chr10 manual_curation polypeptide 5999878 6001119 . + . ID=GSCOCP00034568001;Dbxref=InterPro:IPR021099,PFAM:PF11955,TAIR:AT4G01037.1,TAIR:AT4G08940.1,TAIR:AT5G21970.1,TrEMBL:A5AKV3,TrEMBL:B9GUX1,TrEMBL:F6H0Q5;Derives_from=GSCOCT00034568001;Name=Cc10_g07080;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Ubiquitin carboxyl-terminal hydrolase family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034568001~ Ubiquitin carboxyl-terminal hydrolase family protein~ unknown_gene~ complete;original_location=complement(3060083..3061324);owner=coffea | |
| 40548 chr10 manual_curation exon 5999878 6001119 . + . Parent=GSCOCT00034568001 | |
| 40549 chr10 manual_curation CDS 5999878 6001119 . + 0 Parent=GSCOCT00034568001 | |
| 40550 chr10 manual_curation gene 6002273 6006281 . - . ID=GSCOCG00034567001;Name=Cc10_g07090 | |
| 40551 chr10 manual_curation mRNA 6002273 6006281 . - . ID=GSCOCT00034567001;Parent=GSCOCG00034567001;Name=Cc10_g07090 | |
| 40552 chr10 manual_curation polypeptide 6003243 6005167 . - . ID=GSCOCP00034567001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,PFAM:PF00560,SMART:SM00369,TAIR:AT1G78230.1,TAIR:AT4G03260.1,TrEMBL:A5AKV2,TrEMBL:B9RJL3,TrEMBL:F6H0Q4;Derives_from=GSCOCT00034567001;Name=Cc10_g07090;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative Outer arm dynein light chain 1 protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034567001~ Putative Outer arm dynein light chain 1 protein~ unknown_gene~ fragment;original_location=join(3056035..3056088%2C3056252..3057647%2C3057787..3057959);owner=coffea | |
| 40553 chr10 manual_curation exon 6005114 6006281 . - . Parent=GSCOCT00034567001 | |
| 40554 chr10 manual_curation exon 6003555 6004950 . - . Parent=GSCOCT00034567001 | |
| 40555 chr10 manual_curation exon 6002273 6003415 . - . Parent=GSCOCT00034567001 | |
| 40556 chr10 manual_curation CDS 6005114 6005167 . - 0 Parent=GSCOCT00034567001 | |
| 40557 chr10 manual_curation CDS 6003555 6004950 . - 0 Parent=GSCOCT00034567001 | |
| 40558 chr10 manual_curation CDS 6003243 6003415 . - 1 Parent=GSCOCT00034567001 | |
| 40559 chr10 manual_curation gene 6013394 6021230 . + . ID=GSCOCG00034565001;Name=Cc10_g07100 | |
| 40560 chr10 manual_curation mRNA 6013394 6021230 . + . ID=GSCOCT00034565001;Parent=GSCOCG00034565001;Name=Cc10_g07100 | |
| 40561 chr10 manual_curation polypeptide 6013394 6021049 . + . ID=GSCOCP00034565001;Dbxref=InterPro:IPR001739,InterPro:IPR007087,InterPro:IPR015880,InterPro:IPR016177,PFAM:PF01429,PROFILE:PS50157,PROFILE:PS50982,PROSITE:PS00028,SMART:SM00355,SUPERFAMILY:SSF54171,SwissProt:Q9LME6,TAIR:AT1G22310.2,TrEMBL:A5AUY6,TrEMBL:B9SIN6,TrEMBL:F6H0Q3;Derives_from=GSCOCT00034565001;Name=Cc10_g07100;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0005622,GO:0005634,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:modules,CC_gene:MBD8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034565001~ Putative uncharacterized protein~ MBD8~ modules;original_location=complement(join(3047388..3047808%2C3046820..3047165%2C3043689..3043830%2C3041274..3043604%2C3040153..3040524));owner=coffea | |
| 40562 chr10 manual_curation exon 6020678 6021230 . + . Parent=GSCOCT00034565001 | |
| 40563 chr10 manual_curation exon 6017598 6019928 . + . Parent=GSCOCT00034565001 | |
| 40564 chr10 manual_curation exon 6017372 6017513 . + . Parent=GSCOCT00034565001 | |
| 40565 chr10 manual_curation exon 6014037 6014382 . + . Parent=GSCOCT00034565001 | |
| 40566 chr10 manual_curation exon 6013394 6013814 . + . Parent=GSCOCT00034565001 | |
| 40567 chr10 manual_curation CDS 6020678 6021049 . + 0 Parent=GSCOCT00034565001 | |
| 40568 chr10 manual_curation CDS 6017598 6019928 . + 0 Parent=GSCOCT00034565001 | |
| 40569 chr10 manual_curation CDS 6017372 6017513 . + 2 Parent=GSCOCT00034565001 | |
| 40570 chr10 manual_curation CDS 6014037 6014382 . + 1 Parent=GSCOCT00034565001 | |
| 40571 chr10 manual_curation CDS 6013394 6013814 . + 0 Parent=GSCOCT00034565001 | |
| 40572 chr10 manual_curation gene 6024615 6029956 . + . ID=GSCOCG00034564001;Name=Cc10_g07110 | |
| 40573 chr10 manual_curation mRNA 6024615 6029956 . + . ID=GSCOCT00034564001;Parent=GSCOCG00034564001;Name=Cc10_g07110 | |
| 40574 chr10 manual_curation polypeptide 6024798 6029605 . + . ID=GSCOCP00034564001;Dbxref=GENE3D:G3DSA:3.40.30.10,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR013766,InterPro:IPR017936,PFAM:PF00085,PROFILE:PS51352,SUPERFAMILY:SSF52833,SwissProt:Q84P95,SwissProt:Q9SA00,SwissProt:Q9ZPE9,TAIR:AT1G34780.1,TAIR:AT3G03860.1,TAIR:AT4G08930.1,TrEMBL:B9GUW8,TrEMBL:B9RJL1,TrEMBL:F6H0Q2;Derives_from=GSCOCT00034564001;Name=Cc10_g07110;Ontology_term=CC_evidence_code:ISS,GO:0045454,CC_EC_number:missing_EC_number,PRODUCT:5'-adenylylsulfate reductase-like 4,CC_functional_completeness:complete,CC_gene:APRL4,CC_gene:APRL3,CC_gene:APRL6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034564001~ 5'-adenylylsulfate reductase-like 4~ APRL4~ complete;original_location=complement(join(3036198..3036404%2C3033263..3033450%2C3033050..3033174%2C3031597..3032042));owner=coffea | |
| 40575 chr10 manual_curation exon 6029160 6029956 . + . Parent=GSCOCT00034564001 | |
| 40576 chr10 manual_curation exon 6028028 6028152 . + . Parent=GSCOCT00034564001 | |
| 40577 chr10 manual_curation exon 6027752 6027939 . + . Parent=GSCOCT00034564001 | |
| 40578 chr10 manual_curation exon 6024615 6025004 . + . Parent=GSCOCT00034564001 | |
| 40579 chr10 manual_curation CDS 6029160 6029605 . + 1 Parent=GSCOCT00034564001 | |
| 40580 chr10 manual_curation CDS 6028028 6028152 . + 2 Parent=GSCOCT00034564001 | |
| 40581 chr10 manual_curation CDS 6027752 6027939 . + 0 Parent=GSCOCT00034564001 | |
| 40582 chr10 manual_curation CDS 6024798 6025004 . + 0 Parent=GSCOCT00034564001 | |
| 40583 chr10 manual_curation gene 6032951 6038894 . + . ID=GSCOCG00034563001;Name=Cc10_g07120 | |
| 40584 chr10 manual_curation mRNA 6032951 6038894 . + . ID=GSCOCT00034563001;Parent=GSCOCG00034563001;Name=Cc10_g07120 | |
| 40585 chr10 manual_curation polypeptide 6033207 6038506 . + . ID=GSCOCP00034563001;Dbxref=GENE3D:G3DSA:1.20.190.20,InterPro:IPR000308,PANTHER:PTHR18860,PFAM:PF00244,PIR:PIRSF000868,PRINTS:PR00305,PROSITE:PS00796,PROSITE:PS00797,SMART:SM00101,SUPERFAMILY:SSF48445,SwissProt:P93212,SwissProt:Q41246,SwissProt:Q9S9Z8,TAIR:AT1G22300.1,TAIR:AT1G26480.1,TAIR:AT1G34760.1,TrEMBL:A1XJ43,TrEMBL:F1BWW9,TrEMBL:F1BWX1;Derives_from=GSCOCT00034563001;Name=Cc10_g07120;Ontology_term=CC_evidence_code:ISS,GO:0019904,CC_EC_number:missing_EC_number,PRODUCT:14-3-3 protein 7,CC_functional_completeness:complete,CC_gene:TFT7,CC_gene:GRF11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034563001~ 14-3-3 protein 7~ TFT7~ complete;original_location=complement(join(3027929..3027995%2C3025659..3025965%2C3024947..3025034%2C3024692..3024801%2C3023667..3023815%2C3022973..3023007%2C3022696..3022701));owner=coffea | |
| 40586 chr10 manual_curation exon 6038501 6038894 . + . Parent=GSCOCT00034563001 | |
| 40587 chr10 manual_curation exon 6038195 6038229 . + . Parent=GSCOCT00034563001 | |
| 40588 chr10 manual_curation exon 6037387 6037535 . + . Parent=GSCOCT00034563001 | |
| 40589 chr10 manual_curation exon 6036401 6036510 . + . Parent=GSCOCT00034563001 | |
| 40590 chr10 manual_curation exon 6036168 6036255 . + . Parent=GSCOCT00034563001 | |
| 40591 chr10 manual_curation exon 6035237 6035543 . + . Parent=GSCOCT00034563001 | |
| 40592 chr10 manual_curation exon 6032951 6033273 . + . Parent=GSCOCT00034563001 | |
| 40593 chr10 manual_curation CDS 6038501 6038506 . + 0 Parent=GSCOCT00034563001 | |
| 40594 chr10 manual_curation CDS 6038195 6038229 . + 1 Parent=GSCOCT00034563001 | |
| 40595 chr10 manual_curation CDS 6037387 6037535 . + 2 Parent=GSCOCT00034563001 | |
| 40596 chr10 manual_curation CDS 6036401 6036510 . + 0 Parent=GSCOCT00034563001 | |
| 40597 chr10 manual_curation CDS 6036168 6036255 . + 2 Parent=GSCOCT00034563001 | |
| 40598 chr10 manual_curation CDS 6035237 6035543 . + 1 Parent=GSCOCT00034563001 | |
| 40599 chr10 manual_curation CDS 6033207 6033273 . + 0 Parent=GSCOCT00034563001 | |
| 40600 chr10 manual_curation gene 6039025 6041523 . - . ID=GSCOCG00034562001;Name=Cc10_g07130 | |
| 40601 chr10 manual_curation mRNA 6039025 6041523 . - . ID=GSCOCT00034562001;Parent=GSCOCG00034562001;Name=Cc10_g07130 | |
| 40602 chr10 manual_curation polypeptide 6039331 6041242 . - . ID=GSCOCP00034562001;Dbxref=InterPro:IPR000073,InterPro:IPR000639,PFAM:PF00561,PRINTS:PR00111,PRINTS:PR00412,SwissProt:Q5XI64,SwissProt:Q8R2Y0,SwissProt:Q9BV23,TAIR:AT1G78210.1,TAIR:AT4G39955.1,TAIR:AT5G09430.1,TrEMBL:B9GUW6,TrEMBL:E0CRL0,TrEMBL:G7KBA0;Derives_from=GSCOCT00034562001;Name=Cc10_g07130;Ontology_term=CC_evidence_code:ISS,GO:0003824,CC_EC_number:3.1.1.1,PRODUCT:Putative Monoacylglycerol lipase ABHD6,CC_functional_completeness:fragment,CC_gene:Abhd6,CC_gene:ABHD6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034562001~ Putative Monoacylglycerol lipase ABHD6~ Abhd6~ fragment;original_location=join(3019960..3020583%2C3021208..3021300%2C3021536..3021603%2C3021760..3021871);owner=coffea | |
| 40603 chr10 manual_curation exon 6040619 6041523 . - . Parent=GSCOCT00034562001 | |
| 40604 chr10 manual_curation exon 6039902 6039994 . - . Parent=GSCOCT00034562001 | |
| 40605 chr10 manual_curation exon 6039599 6039666 . - . Parent=GSCOCT00034562001 | |
| 40606 chr10 manual_curation exon 6039025 6039442 . - . Parent=GSCOCT00034562001 | |
| 40607 chr10 manual_curation CDS 6040619 6041242 . - 0 Parent=GSCOCT00034562001 | |
| 40608 chr10 manual_curation CDS 6039902 6039994 . - 0 Parent=GSCOCT00034562001 | |
| 40609 chr10 manual_curation CDS 6039599 6039666 . - 0 Parent=GSCOCT00034562001 | |
| 40610 chr10 manual_curation CDS 6039331 6039442 . - 2 Parent=GSCOCT00034562001 | |
| 40611 chr10 manual_curation gene 6057011 6061708 . - . ID=GSCOCG00034561001;Name=Cc10_g07140 | |
| 40612 chr10 manual_curation mRNA 6057011 6061708 . - . ID=GSCOCT00034561001;Parent=GSCOCG00034561001;Name=Cc10_g07140 | |
| 40613 chr10 manual_curation polypeptide 6057264 6061129 . - . ID=GSCOCP00034561001;Dbxref=GENE3D:G3DSA:3.60.40.10,InterPro:IPR001932,InterPro:IPR014045,InterPro:IPR015655,PANTHER:PTHR13832,PFAM:PF00481,SMART:SM00331,SMART:SM00332,SUPERFAMILY:SSF81606,SwissProt:Q7XQU7,SwissProt:Q9LME4,SwissProt:Q9S9Z7,TAIR:AT1G22280.3,TAIR:AT1G34750.1,TAIR:AT1G78200.1,TrEMBL:B9H730,TrEMBL:E0CRK9,TrEMBL:I1K9Y2;Derives_from=GSCOCT00034561001;Name=Cc10_g07140;Ontology_term=CC_evidence_code:ISS,GO:0003824,CC_EC_number:3.1.3.16,PRODUCT:Probable protein phosphatase 2C 10,CC_functional_completeness:complete,CC_gene:At1g34750,CC_gene:At1g22280,CC_gene:Os04g0452000;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034561001~ Probable protein phosphatase 2C 10~ At1g34750~ complete;original_location=join(3000073..3000111%2C3001208..3001447%2C3001537..3001813%2C3003516..3003670%2C3003798..3003938);owner=coffea | |
| 40614 chr10 manual_curation exon 6061437 6061708 . - . Parent=GSCOCT00034561001 | |
| 40615 chr10 manual_curation exon 6061091 6061198 . - . Parent=GSCOCT00034561001 | |
| 40616 chr10 manual_curation exon 6059755 6059994 . - . Parent=GSCOCT00034561001 | |
| 40617 chr10 manual_curation exon 6059389 6059665 . - . Parent=GSCOCT00034561001 | |
| 40618 chr10 manual_curation exon 6057532 6057686 . - . Parent=GSCOCT00034561001 | |
| 40619 chr10 manual_curation exon 6057011 6057404 . - . Parent=GSCOCT00034561001 | |
| 40620 chr10 manual_curation CDS 6061091 6061129 . - 0 Parent=GSCOCT00034561001 | |
| 40621 chr10 manual_curation CDS 6059755 6059994 . - 0 Parent=GSCOCT00034561001 | |
| 40622 chr10 manual_curation CDS 6059389 6059665 . - 0 Parent=GSCOCT00034561001 | |
| 40623 chr10 manual_curation CDS 6057532 6057686 . - 1 Parent=GSCOCT00034561001 | |
| 40624 chr10 manual_curation CDS 6057264 6057404 . - 0 Parent=GSCOCT00034561001 | |
| 40625 chr10 manual_curation gene 6073710 6074611 . + . ID=GSCOCG00034559001;Name=Cc10_g07150 | |
| 40626 chr10 manual_curation mRNA 6073710 6074611 . + . ID=GSCOCT00034559001;Parent=GSCOCG00034559001;Name=Cc10_g07150 | |
| 40627 chr10 manual_curation polypeptide 6073710 6074611 . + . ID=GSCOCP00034559001;Dbxref=GENE3D:G3DSA:1.20.1080.10,InterPro:IPR000425,InterPro:IPR022357,PANTHER:PTHR19139,PFAM:PF00230,PRINTS:PR00783,PROSITE:PS00221,SUPERFAMILY:SSF81338,SwissProt:P08995,SwissProt:Q8LFP7,SwissProt:Q8VZW1,TAIR:AT1G31885.1,TAIR:AT4G18910.1,TAIR:AT4G19030.1,TrEMBL:B9GUW3,TrEMBL:B9RJK4,TrEMBL:I1MAU3;Derives_from=GSCOCT00034559001;Name=Cc10_g07150;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006810,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Aquaporin NIP1-1,CC_functional_completeness:fragment,CC_gene:NIP1-1,CC_gene:NIP1-2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034559001~ Aquaporin NIP1-1~ NIP1-1~ fragment;original_location=complement(join(2987288..2987492%2C2986953..2987158%2C2986740..2986787%2C2986591..2986668));owner=coffea | |
| 40628 chr10 manual_curation exon 6074534 6074611 . + . Parent=GSCOCT00034559001 | |
| 40629 chr10 manual_curation exon 6074415 6074462 . + . Parent=GSCOCT00034559001 | |
| 40630 chr10 manual_curation exon 6074044 6074249 . + . Parent=GSCOCT00034559001 | |
| 40631 chr10 manual_curation exon 6073710 6073914 . + . Parent=GSCOCT00034559001 | |
| 40632 chr10 manual_curation CDS 6074534 6074611 . + 0 Parent=GSCOCT00034559001 | |
| 40633 chr10 manual_curation CDS 6074415 6074462 . + 0 Parent=GSCOCT00034559001 | |
| 40634 chr10 manual_curation CDS 6074044 6074249 . + 1 Parent=GSCOCT00034559001 | |
| 40635 chr10 manual_curation CDS 6073710 6073914 . + 0 Parent=GSCOCT00034559001 | |
| 40636 chr10 manual_curation gene 6075009 6081665 . - . ID=GSCOCG00034558001;Name=Cc10_g07160 | |
| 40637 chr10 manual_curation mRNA 6075009 6081665 . - . ID=GSCOCT00034558001;Parent=GSCOCG00034558001;Name=Cc10_g07160 | |
| 40638 chr10 manual_curation polypeptide 6076200 6081225 . - . ID=GSCOCP00034558001;Dbxref=GENE3D:G3DSA:3.40.50.620,InterPro:IPR002081,InterPro:IPR005101,InterPro:IPR006050,InterPro:IPR014134,InterPro:IPR014729,InterPro:IPR018394,InterPro:IPR020978,PFAM:PF00875,PFAM:PF03441,PFAM:PF12546,PRINTS:PR00147,PROSITE:PS00394,PROSITE:PS00691,SUPERFAMILY:SSF48173,SUPERFAMILY:SSF52425,SwissProt:P40115,SwissProt:Q43125,SwissProt:Q96524,TAIR:AT1G04400.2,TAIR:AT3G15620.1,TAIR:AT4G08920.1,TIGRFAMs:TIGR02766,TrEMBL:B9H731,TrEMBL:G1FMC8,TrEMBL:Q309E8;Derives_from=GSCOCT00034558001;Name=Cc10_g07160;Ontology_term=CC_evidence_code:ISS,GO:0003913,GO:0006281,CC_EC_number:4.1.99.3,PRODUCT:Cryptochrome-1,CC_functional_completeness:complete,CC_gene:CRY1,CC_gene:CRY2,CC_gene:PHR1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034558001~ Cryptochrome-1~ CRY1~ complete;original_location=join(2979977..2980289%2C2981844..2982062%2C2982865..2983571%2C2984193..2985002);owner=coffea | |
| 40639 chr10 manual_curation exon 6080913 6081665 . - . Parent=GSCOCT00034558001 | |
| 40640 chr10 manual_curation exon 6079140 6079358 . - . Parent=GSCOCT00034558001 | |
| 40641 chr10 manual_curation exon 6077631 6078337 . - . Parent=GSCOCT00034558001 | |
| 40642 chr10 manual_curation exon 6075009 6077009 . - . Parent=GSCOCT00034558001 | |
| 40643 chr10 manual_curation CDS 6080913 6081225 . - 0 Parent=GSCOCT00034558001 | |
| 40644 chr10 manual_curation CDS 6079140 6079358 . - 1 Parent=GSCOCT00034558001 | |
| 40645 chr10 manual_curation CDS 6077631 6078337 . - 1 Parent=GSCOCT00034558001 | |
| 40646 chr10 manual_curation CDS 6076200 6077009 . - 0 Parent=GSCOCT00034558001 | |
| 40647 chr10 manual_curation gene 6089368 6090655 . - . ID=GSCOCG00034557001;Name=Cc10_g07170 | |
| 40648 chr10 manual_curation mRNA 6089368 6090655 . - . ID=GSCOCT00034557001;Parent=GSCOCG00034557001;Name=Cc10_g07170 | |
| 40649 chr10 manual_curation polypeptide 6089368 6090655 . - . ID=GSCOCP00034557001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001005,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR014778,InterPro:IPR015495,InterPro:IPR017930,PANTHER:PTHR10641,PFAM:PF00249,PROFILE:PS51294,SMART:SM00717,SUPERFAMILY:SSF46689,SwissProt:Q7XBH4,SwissProt:Q8GWP0,SwissProt:Q9SPG2,TAIR:AT1G34670.1,TAIR:AT5G10280.1,TAIR:AT5G16770.1,TrEMBL:B9GUW1,TrEMBL:B9H732,TrEMBL:I1K9Y8;Derives_from=GSCOCT00034557001;Name=Cc10_g07170;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:myb domain protein 93,CC_functional_completeness:complete,CC_gene:MYB39,CC_gene:MYB28,CC_gene:MYB4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034557001~ myb domain protein 93~ MYB39~ complete;original_location=join(2970547..2970679%2C2970787..2970916%2C2971084..2971834);owner=coffea | |
| 40650 chr10 manual_curation exon 6090523 6090655 . - . Parent=GSCOCT00034557001 | |
| 40651 chr10 manual_curation exon 6090286 6090415 . - . Parent=GSCOCT00034557001 | |
| 40652 chr10 manual_curation exon 6089368 6090118 . - . Parent=GSCOCT00034557001 | |
| 40653 chr10 manual_curation CDS 6090523 6090655 . - 0 Parent=GSCOCT00034557001 | |
| 40654 chr10 manual_curation CDS 6090286 6090415 . - 1 Parent=GSCOCT00034557001 | |
| 40655 chr10 manual_curation CDS 6089368 6090118 . - 2 Parent=GSCOCT00034557001 | |
| 40656 chr10 manual_curation gene 6100012 6101260 . + . ID=GSCOCG00034556001;Name=Cc10_g07180 | |
| 40657 chr10 manual_curation mRNA 6100012 6101260 . + . ID=GSCOCT00034556001;Parent=GSCOCG00034556001;Name=Cc10_g07180 | |
| 40658 chr10 manual_curation polypeptide 6100190 6101089 . + . ID=GSCOCP00034556001;Dbxref=InterPro:IPR009542,PFAM:PF06645,TAIR:AT1G34640.1,TrEMBL:B9RJK1,TrEMBL:C6SVQ4,TrEMBL:I1K9Z0;Derives_from=GSCOCT00034556001;Name=Cc10_g07180;Ontology_term=CC_evidence_code:ISS,GO:0005787,GO:0006465,GO:0008233,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Putative peptidases,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034556001~ Putative peptidases~ unknown_gene~ complete;original_location=complement(join(2960765..2961012%2C2960113..2960200));owner=coffea | |
| 40659 chr10 manual_curation exon 6101002 6101260 . + . Parent=GSCOCT00034556001 | |
| 40660 chr10 manual_curation exon 6100012 6100437 . + . Parent=GSCOCT00034556001 | |
| 40661 chr10 manual_curation CDS 6101002 6101089 . + 2 Parent=GSCOCT00034556001 | |
| 40662 chr10 manual_curation CDS 6100190 6100437 . + 0 Parent=GSCOCT00034556001 | |
| 40663 chr10 manual_curation gene 6102564 6102932 . + . ID=GSCOCG00034555001;Name=Cc10_g07190 | |
| 40664 chr10 manual_curation mRNA 6102564 6102932 . + . ID=GSCOCT00034555001;Parent=GSCOCG00034555001;Name=Cc10_g07190 | |
| 40665 chr10 manual_curation polypeptide 6102564 6102932 . + . ID=GSCOCP00034555001;Dbxref=InterPro:IPR005651,PFAM:PF03966,SwissProt:Q8LFJ5,SwissProt:Q9C9R3,SwissProt:Q9DCG9,TAIR:AT1G22270.1,TAIR:AT1G78190.1,TrEMBL:B9SWY6,TrEMBL:F6HV21,TrEMBL:G7IFU4;Derives_from=GSCOCT00034555001;Name=Cc10_g07190;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:TRM112-like protein At1g78190,CC_functional_completeness:complete,CC_gene:At1g78190,CC_gene:At1g22270,CC_gene:Trmt112;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034555001~ TRM112-like protein At1g78190~ At1g78190~ complete;original_location=complement(2958270..2958638);owner=coffea | |
| 40666 chr10 manual_curation exon 6102564 6102932 . + . Parent=GSCOCT00034555001 | |
| 40667 chr10 manual_curation CDS 6102564 6102932 . + 0 Parent=GSCOCT00034555001 | |
| 40668 chr10 manual_curation gene 6103726 6109231 . - . ID=GSCOCG00034553001;Name=Cc10_g07200 | |
| 40669 chr10 manual_curation mRNA 6103726 6109231 . - . ID=GSCOCT00034553001;Parent=GSCOCG00034553001;Name=Cc10_g07200 | |
| 40670 chr10 manual_curation polypeptide 6104040 6109231 . - . ID=GSCOCP00034553001;Dbxref=TAIR:AT1G34630.1,TAIR:AT5G51150.1,TrEMBL:B9RJK0,TrEMBL:F6H0Q1,TrEMBL:I1MHL1;Derives_from=GSCOCT00034553001;Name=Cc10_g07200;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:BEST Arabidopsis thaliana protein match is,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034553001~ BEST Arabidopsis thaliana protein match is: Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein (TAIR:AT5G51150.1)%3B Has 323 Blast hits to 315 proteins in 124 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 95%3B Fungi - 110%3B Plants - 73%3B Viruses - 0%3B Other Eukaryotes - 45 (source: NCBI BLink).~ unknown_gene~ fragment;original_location=join(2951971..2952103%2C2952221..2952233%2C2952277..2952504%2C2953870..2954077%2C2955280..2955416%2C2955874..2955954%2C2956713..2956779%2C2956863..2957162);owner=coffea | |
| 40671 chr10 manual_curation exon 6109099 6109231 . - . Parent=GSCOCT00034553001 | |
| 40672 chr10 manual_curation exon 6108969 6108981 . - . Parent=GSCOCT00034553001 | |
| 40673 chr10 manual_curation exon 6108698 6108925 . - . Parent=GSCOCT00034553001 | |
| 40674 chr10 manual_curation exon 6107125 6107332 . - . Parent=GSCOCT00034553001 | |
| 40675 chr10 manual_curation exon 6105786 6105922 . - . Parent=GSCOCT00034553001 | |
| 40676 chr10 manual_curation exon 6105248 6105328 . - . Parent=GSCOCT00034553001 | |
| 40677 chr10 manual_curation exon 6104423 6104489 . - . Parent=GSCOCT00034553001 | |
| 40678 chr10 manual_curation exon 6103726 6104339 . - . Parent=GSCOCT00034553001 | |
| 40679 chr10 manual_curation CDS 6109099 6109231 . - 0 Parent=GSCOCT00034553001 | |
| 40680 chr10 manual_curation CDS 6108969 6108981 . - 1 Parent=GSCOCT00034553001 | |
| 40681 chr10 manual_curation CDS 6108698 6108925 . - 2 Parent=GSCOCT00034553001 | |
| 40682 chr10 manual_curation CDS 6107125 6107332 . - 2 Parent=GSCOCT00034553001 | |
| 40683 chr10 manual_curation CDS 6105786 6105922 . - 0 Parent=GSCOCT00034553001 | |
| 40684 chr10 manual_curation CDS 6105248 6105328 . - 2 Parent=GSCOCT00034553001 | |
| 40685 chr10 manual_curation CDS 6104423 6104489 . - 2 Parent=GSCOCT00034553001 | |
| 40686 chr10 manual_curation CDS 6104040 6104339 . - 0 Parent=GSCOCT00034553001 | |
| 40687 chr10 manual_curation gene 6109297 6110135 . - . ID=GSCOCG00034552001;Name=Cc10_g07210 | |
| 40688 chr10 manual_curation mRNA 6109297 6110135 . - . ID=GSCOCT00034552001;Parent=GSCOCG00034552001;Name=Cc10_g07210 | |
| 40689 chr10 manual_curation polypeptide 6109297 6109985 . - . ID=GSCOCP00034552001;Dbxref=TAIR:AT1G34630.1,TrEMBL:B9GUV8,TrEMBL:B9RJK0,TrEMBL:F6H0Q1;Derives_from=GSCOCT00034552001;Name=Cc10_g07210;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034552001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(2951217..2951509%2C2951746..2951905);owner=coffea | |
| 40690 chr10 manual_curation exon 6109693 6110135 . - . Parent=GSCOCT00034552001 | |
| 40691 chr10 manual_curation exon 6109297 6109456 . - . Parent=GSCOCT00034552001 | |
| 40692 chr10 manual_curation CDS 6109693 6109985 . - 0 Parent=GSCOCT00034552001 | |
| 40693 chr10 manual_curation CDS 6109297 6109456 . - 2 Parent=GSCOCT00034552001 | |
| 40694 chr10 manual_curation gene 6112949 6120882 . - . ID=GSCOCG00034551001;Name=Cc10_g07220 | |
| 40695 chr10 manual_curation mRNA 6112949 6120882 . - . ID=GSCOCT00034551001;Parent=GSCOCG00034551001;Name=Cc10_g07220 | |
| 40696 chr10 manual_curation polypeptide 6113423 6120689 . - . ID=GSCOCP00034551001;Dbxref=InterPro:IPR001993,InterPro:IPR002067,InterPro:IPR018108,PANTHER:PTHR11896,PFAM:PF00153,PRINTS:PR00926,PROFILE:PS50920,SUPERFAMILY:SSF103506,SwissProt:Q54MZ4,SwissProt:Q6NUK1,SwissProt:Q8BMD8,TAIR:AT1G78180.1,TAIR:AT4G32400.1,TAIR:AT5G64970.1,TrEMBL:B9H735,TrEMBL:B9RJJ9,TrEMBL:F6H0Q0;Derives_from=GSCOCT00034551001;Name=Cc10_g07220;Ontology_term=CC_evidence_code:ISS,GO:0005488,GO:0005743,GO:0006810,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Putative Calcium-binding mitochondrial carrier protein SCaMC-1,CC_functional_completeness:complete,CC_gene:mcfB,CC_gene:Slc25a24,CC_gene:SLC25A24;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034551001~ Putative Calcium-binding mitochondrial carrier protein SCaMC-1~ mcfB~ complete;original_location=join(2940513..2940762%2C2940805..2940959%2C2944059..2944066%2C2945490..2945793%2C2946544..2947011%2C2947711..2947779);owner=coffea | |
| 40697 chr10 manual_curation exon 6120440 6120882 . - . Parent=GSCOCT00034551001 | |
| 40698 chr10 manual_curation exon 6120243 6120397 . - . Parent=GSCOCT00034551001 | |
| 40699 chr10 manual_curation exon 6117136 6117143 . - . Parent=GSCOCT00034551001 | |
| 40700 chr10 manual_curation exon 6115409 6115712 . - . Parent=GSCOCT00034551001 | |
| 40701 chr10 manual_curation exon 6114191 6114658 . - . Parent=GSCOCT00034551001 | |
| 40702 chr10 manual_curation exon 6112949 6113491 . - . Parent=GSCOCT00034551001 | |
| 40703 chr10 manual_curation CDS 6120440 6120689 . - 0 Parent=GSCOCT00034551001 | |
| 40704 chr10 manual_curation CDS 6120243 6120397 . - 1 Parent=GSCOCT00034551001 | |
| 40705 chr10 manual_curation CDS 6117136 6117143 . - 0 Parent=GSCOCT00034551001 | |
| 40706 chr10 manual_curation CDS 6115409 6115712 . - 2 Parent=GSCOCT00034551001 | |
| 40707 chr10 manual_curation CDS 6114191 6114658 . - 0 Parent=GSCOCT00034551001 | |
| 40708 chr10 manual_curation CDS 6113423 6113491 . - 0 Parent=GSCOCT00034551001 | |
| 40709 chr10 manual_curation gene 6123694 6130879 . + . ID=GSCOCG00034550001;Name=Cc10_g07230 | |
| 40710 chr10 manual_curation mRNA 6123694 6130879 . + . ID=GSCOCT00034550001;Parent=GSCOCG00034550001;Name=Cc10_g07230 | |
| 40711 chr10 manual_curation polypeptide 6123694 6130879 . + . ID=GSCOCP00034550001;Dbxref=SwissProt:P61430,SwissProt:Q9LME2,TAIR:AT1G22260.1,TAIR:AT1G22275.1,TrEMBL:B9GUV7,TrEMBL:B9RJJ8,TrEMBL:E0CRK4;Derives_from=GSCOCT00034550001;Name=Cc10_g07230;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Synaptonemal complex protein 1,CC_functional_completeness:complete,CC_gene:ZYP1A,CC_gene:ZYP1B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034550001~ Synaptonemal complex protein 1~ ZYP1A~ complete;original_location=complement(join(2937349..2937508%2C2937199..2937248%2C2936687..2936894%2C2936475..2936600%2C2936233..2936331%2C2934149..2934828%2C2933820..2934068%2C2933598..2933726%2C2933425..2933493%2C2933239..2933349%2C2932860..2932967%2C2932642..2932752%2C2932490..2932576%2C2931659..2931748%2C2931466..2931573%2C2931004..2931090%2C2930842..2930904%2C2930323..2930424));owner=coffea | |
| 40712 chr10 manual_curation exon 6130778 6130879 . + . Parent=GSCOCT00034550001 | |
| 40713 chr10 manual_curation exon 6130298 6130360 . + . Parent=GSCOCT00034550001 | |
| 40714 chr10 manual_curation exon 6130112 6130198 . + . Parent=GSCOCT00034550001 | |
| 40715 chr10 manual_curation exon 6129629 6129736 . + . Parent=GSCOCT00034550001 | |
| 40716 chr10 manual_curation exon 6129454 6129543 . + . Parent=GSCOCT00034550001 | |
| 40717 chr10 manual_curation exon 6128626 6128712 . + . Parent=GSCOCT00034550001 | |
| 40718 chr10 manual_curation exon 6128450 6128560 . + . Parent=GSCOCT00034550001 | |
| 40719 chr10 manual_curation exon 6128235 6128342 . + . Parent=GSCOCT00034550001 | |
| 40720 chr10 manual_curation exon 6127853 6127963 . + . Parent=GSCOCT00034550001 | |
| 40721 chr10 manual_curation exon 6127709 6127777 . + . Parent=GSCOCT00034550001 | |
| 40722 chr10 manual_curation exon 6127476 6127604 . + . Parent=GSCOCT00034550001 | |
| 40723 chr10 manual_curation exon 6127134 6127382 . + . Parent=GSCOCT00034550001 | |
| 40724 chr10 manual_curation exon 6126374 6127053 . + . Parent=GSCOCT00034550001 | |
| 40725 chr10 manual_curation exon 6124871 6124969 . + . Parent=GSCOCT00034550001 | |
| 40726 chr10 manual_curation exon 6124602 6124727 . + . Parent=GSCOCT00034550001 | |
| 40727 chr10 manual_curation exon 6124308 6124515 . + . Parent=GSCOCT00034550001 | |
| 40728 chr10 manual_curation exon 6123954 6124003 . + . Parent=GSCOCT00034550001 | |
| 40729 chr10 manual_curation exon 6123694 6123853 . + . Parent=GSCOCT00034550001 | |
| 40730 chr10 manual_curation CDS 6130778 6130879 . + 0 Parent=GSCOCT00034550001 | |
| 40731 chr10 manual_curation CDS 6130298 6130360 . + 0 Parent=GSCOCT00034550001 | |
| 40732 chr10 manual_curation CDS 6130112 6130198 . + 0 Parent=GSCOCT00034550001 | |
| 40733 chr10 manual_curation CDS 6129629 6129736 . + 0 Parent=GSCOCT00034550001 | |
| 40734 chr10 manual_curation CDS 6129454 6129543 . + 0 Parent=GSCOCT00034550001 | |
| 40735 chr10 manual_curation CDS 6128626 6128712 . + 0 Parent=GSCOCT00034550001 | |
| 40736 chr10 manual_curation CDS 6128450 6128560 . + 0 Parent=GSCOCT00034550001 | |
| 40737 chr10 manual_curation CDS 6128235 6128342 . + 0 Parent=GSCOCT00034550001 | |
| 40738 chr10 manual_curation CDS 6127853 6127963 . + 0 Parent=GSCOCT00034550001 | |
| 40739 chr10 manual_curation CDS 6127709 6127777 . + 0 Parent=GSCOCT00034550001 | |
| 40740 chr10 manual_curation CDS 6127476 6127604 . + 0 Parent=GSCOCT00034550001 | |
| 40741 chr10 manual_curation CDS 6127134 6127382 . + 0 Parent=GSCOCT00034550001 | |
| 40742 chr10 manual_curation CDS 6126374 6127053 . + 1 Parent=GSCOCT00034550001 | |
| 40743 chr10 manual_curation CDS 6124871 6124969 . + 1 Parent=GSCOCT00034550001 | |
| 40744 chr10 manual_curation CDS 6124602 6124727 . + 1 Parent=GSCOCT00034550001 | |
| 40745 chr10 manual_curation CDS 6124308 6124515 . + 0 Parent=GSCOCT00034550001 | |
| 40746 chr10 manual_curation CDS 6123954 6124003 . + 1 Parent=GSCOCT00034550001 | |
| 40747 chr10 manual_curation CDS 6123694 6123853 . + 0 Parent=GSCOCT00034550001 | |
| 40748 chr10 manual_curation gene 6136348 6144576 . + . ID=GSCOCG00034548001;Name=Cc10_g07240 | |
| 40749 chr10 manual_curation mRNA 6136348 6144576 . + . ID=GSCOCT00034548001;Parent=GSCOCG00034548001;Name=Cc10_g07240 | |
| 40750 chr10 manual_curation polypeptide 6136745 6144576 . + . ID=GSCOCP00034548001;Dbxref=InterPro:IPR005135,PFAM:PF03372,SUPERFAMILY:SSF56219,SwissProt:Q4P9T3,SwissProt:Q8W0Z9,SwissProt:Q9M2F8,TAIR:AT3G18500.3,TAIR:AT3G58560.1,TAIR:AT3G58580.1,TrEMBL:A5B853,TrEMBL:A9PF97,TrEMBL:F6H0P9;Derives_from=GSCOCT00034548001;Name=Cc10_g07240;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Carbon catabolite repressor protein 4 homolog 2,CC_functional_completeness:complete,CC_gene:CCR4-1,CC_gene:CCR4-2,CC_gene:CCR4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034548001~ Putative Carbon catabolite repressor protein 4 homolog 2~ CCR4-1~ complete;original_location=complement(join(2924321..2924457%2C2922228..2922264%2C2921556..2922080%2C2921365..2921451%2C2920433..2920516%2C2920267..2920350%2C2920106..2920186%2C2919946..2919999%2C2919785..2919873%2C2918080..2918188%2C2917187..2917328%2C2916626..2916828));owner=coffea | |
| 40751 chr10 manual_curation exon 6144374 6144576 . + . Parent=GSCOCT00034548001 | |
| 40752 chr10 manual_curation exon 6143874 6144015 . + . Parent=GSCOCT00034548001 | |
| 40753 chr10 manual_curation exon 6143014 6143122 . + . Parent=GSCOCT00034548001 | |
| 40754 chr10 manual_curation exon 6141329 6141417 . + . Parent=GSCOCT00034548001 | |
| 40755 chr10 manual_curation exon 6141203 6141256 . + . Parent=GSCOCT00034548001 | |
| 40756 chr10 manual_curation exon 6141016 6141096 . + . Parent=GSCOCT00034548001 | |
| 40757 chr10 manual_curation exon 6140852 6140935 . + . Parent=GSCOCT00034548001 | |
| 40758 chr10 manual_curation exon 6140686 6140769 . + . Parent=GSCOCT00034548001 | |
| 40759 chr10 manual_curation exon 6139751 6139837 . + . Parent=GSCOCT00034548001 | |
| 40760 chr10 manual_curation exon 6139122 6139646 . + . Parent=GSCOCT00034548001 | |
| 40761 chr10 manual_curation exon 6138938 6138974 . + . Parent=GSCOCT00034548001 | |
| 40762 chr10 manual_curation exon 6136348 6136881 . + . Parent=GSCOCT00034548001 | |
| 40763 chr10 manual_curation CDS 6144374 6144576 . + 1 Parent=GSCOCT00034548001 | |
| 40764 chr10 manual_curation CDS 6143874 6144015 . + 0 Parent=GSCOCT00034548001 | |
| 40765 chr10 manual_curation CDS 6143014 6143122 . + 2 Parent=GSCOCT00034548001 | |
| 40766 chr10 manual_curation CDS 6141329 6141417 . + 0 Parent=GSCOCT00034548001 | |
| 40767 chr10 manual_curation CDS 6141203 6141256 . + 0 Parent=GSCOCT00034548001 | |
| 40768 chr10 manual_curation CDS 6141016 6141096 . + 0 Parent=GSCOCT00034548001 | |
| 40769 chr10 manual_curation CDS 6140852 6140935 . + 0 Parent=GSCOCT00034548001 | |
| 40770 chr10 manual_curation CDS 6140686 6140769 . + 0 Parent=GSCOCT00034548001 | |
| 40771 chr10 manual_curation CDS 6139751 6139837 . + 0 Parent=GSCOCT00034548001 | |
| 40772 chr10 manual_curation CDS 6139122 6139646 . + 0 Parent=GSCOCT00034548001 | |
| 40773 chr10 manual_curation CDS 6138938 6138974 . + 2 Parent=GSCOCT00034548001 | |
| 40774 chr10 manual_curation CDS 6136745 6136881 . + 0 Parent=GSCOCT00034548001 | |
| 40775 chr10 manual_curation gene 6145760 6147125 . - . ID=GSCOCG00034546001;Name=Cc10_g07250 | |
| 40776 chr10 manual_curation mRNA 6145760 6147125 . - . ID=GSCOCT00034546001;Parent=GSCOCG00034546001;Name=Cc10_g07250 | |
| 40777 chr10 manual_curation polypeptide 6146196 6147073 . - . ID=GSCOCP00034546001;Dbxref=InterPro:IPR001202,PROFILE:PS50020,TAIR:AT1G22250.1,TAIR:AT1G78170.1,TAIR:AT4G08910.1,TrEMBL:B9GUV5,TrEMBL:B9H736,TrEMBL:E0CRK2;Derives_from=GSCOCT00034546001;Name=Cc10_g07250;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034546001~ Putative unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22250.1)%3B Has 66 Blast hits to 66 proteins in 11 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 66%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(2914129..2914371%2C2914530..2915006);owner=coffea | |
| 40778 chr10 manual_curation exon 6146831 6147125 . - . Parent=GSCOCT00034546001 | |
| 40779 chr10 manual_curation exon 6145760 6146672 . - . Parent=GSCOCT00034546001 | |
| 40780 chr10 manual_curation CDS 6146831 6147073 . - 0 Parent=GSCOCT00034546001 | |
| 40781 chr10 manual_curation CDS 6146196 6146672 . - 0 Parent=GSCOCT00034546001 | |
| 40782 chr10 manual_curation gene 6158453 6163564 . - . ID=GSCOCG00034545001;Name=Cc10_g07260 | |
| 40783 chr10 manual_curation mRNA 6158453 6163564 . - . ID=GSCOCT00034545001;Parent=GSCOCG00034545001;Name=Cc10_g07260 | |
| 40784 chr10 manual_curation polypeptide 6158453 6163515 . - . ID=GSCOCP00034545001;Dbxref=InterPro:IPR003663,InterPro:IPR005828,InterPro:IPR005829,InterPro:IPR016196,InterPro:IPR020846,PFAM:PF00083,PRINTS:PR00171,PROFILE:PS50850,PROSITE:PS00217,SUPERFAMILY:SSF103473,SwissProt:Q41144,SwissProt:Q93Y91,SwissProt:Q9LT15,TAIR:AT1G11260.1,TAIR:AT1G34580.1,TAIR:AT3G19940.1,TIGRFAMs:TIGR00879,TrEMBL:A5BRZ0,TrEMBL:E0CRK1,TrEMBL:Q6BDD4;Derives_from=GSCOCT00034545001;Name=Cc10_g07260;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006810,GO:0016020,GO:0016021,GO:0022891,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Sugar transport protein 5,CC_functional_completeness:complete,CC_gene:STP5,CC_gene:STC,CC_gene:STP10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034545001~ Sugar transport protein 5~ STP5~ complete;original_location=join(2897687..2897831%2C2899541..2899860%2C2900266..2900895%2C2902327..2902749);owner=coffea | |
| 40785 chr10 manual_curation exon 6163371 6163564 . - . Parent=GSCOCT00034545001 | |
| 40786 chr10 manual_curation exon 6161342 6161661 . - . Parent=GSCOCT00034545001 | |
| 40787 chr10 manual_curation exon 6160307 6160936 . - . Parent=GSCOCT00034545001 | |
| 40788 chr10 manual_curation exon 6158453 6158875 . - . Parent=GSCOCT00034545001 | |
| 40789 chr10 manual_curation CDS 6163371 6163515 . - 0 Parent=GSCOCT00034545001 | |
| 40790 chr10 manual_curation CDS 6161342 6161661 . - 1 Parent=GSCOCT00034545001 | |
| 40791 chr10 manual_curation CDS 6160307 6160936 . - 0 Parent=GSCOCT00034545001 | |
| 40792 chr10 manual_curation CDS 6158453 6158875 . - 0 Parent=GSCOCT00034545001 | |
| 40793 chr10 manual_curation gene 6170658 6174242 . + . ID=GSCOCG00034544001;Name=Cc10_g07270 | |
| 40794 chr10 manual_curation mRNA 6170658 6174242 . + . ID=GSCOCT00034544001;Parent=GSCOCG00034544001;Name=Cc10_g07270 | |
| 40795 chr10 manual_curation polypeptide 6170737 6173164 . + . ID=GSCOCP00034544001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR003954,InterPro:IPR012677,PFAM:PF00076,PROFILE:PS50102,SMART:SM00360,SMART:SM00361,SwissProt:P30352,SwissProt:Q06A98,SwissProt:Q5R1W5,TAIR:AT3G13570.1,TAIR:AT5G18810.1,TAIR:AT5G64200.1,TrEMBL:B9SZR9,TrEMBL:E0CRK0,TrEMBL:Q308B2;Derives_from=GSCOCT00034544001;Name=Cc10_g07270;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:SRSF2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034544001~ Putative uncharacterized protein~ SRSF2~ complete;original_location=complement(join(2890390..2890465%2C2890222..2890300%2C2889605..2889684%2C2889421..2889487%2C2889137..2889208%2C2888410..2888613%2C2888128..2888311%2C2888038..2888043));owner=coffea | |
| 40796 chr10 manual_curation exon 6173159 6174242 . + . Parent=GSCOCT00034544001 | |
| 40797 chr10 manual_curation exon 6172891 6173074 . + . Parent=GSCOCT00034544001 | |
| 40798 chr10 manual_curation exon 6172589 6172792 . + . Parent=GSCOCT00034544001 | |
| 40799 chr10 manual_curation exon 6171994 6172065 . + . Parent=GSCOCT00034544001 | |
| 40800 chr10 manual_curation exon 6171715 6171781 . + . Parent=GSCOCT00034544001 | |
| 40801 chr10 manual_curation exon 6171518 6171597 . + . Parent=GSCOCT00034544001 | |
| 40802 chr10 manual_curation exon 6170902 6170980 . + . Parent=GSCOCT00034544001 | |
| 40803 chr10 manual_curation exon 6170658 6170812 . + . Parent=GSCOCT00034544001 | |
| 40804 chr10 manual_curation CDS 6173159 6173164 . + 0 Parent=GSCOCT00034544001 | |
| 40805 chr10 manual_curation CDS 6172891 6173074 . + 2 Parent=GSCOCT00034544001 | |
| 40806 chr10 manual_curation CDS 6172589 6172792 . + 2 Parent=GSCOCT00034544001 | |
| 40807 chr10 manual_curation CDS 6171994 6172065 . + 2 Parent=GSCOCT00034544001 | |
| 40808 chr10 manual_curation CDS 6171715 6171781 . + 1 Parent=GSCOCT00034544001 | |
| 40809 chr10 manual_curation CDS 6171518 6171597 . + 2 Parent=GSCOCT00034544001 | |
| 40810 chr10 manual_curation CDS 6170902 6170980 . + 1 Parent=GSCOCT00034544001 | |
| 40811 chr10 manual_curation CDS 6170737 6170812 . + 0 Parent=GSCOCT00034544001 | |
| 40812 chr10 manual_curation gene 6175999 6177742 . + . ID=GSCOCG00034543001;Name=Cc10_g07280 | |
| 40813 chr10 manual_curation mRNA 6175999 6177742 . + . ID=GSCOCT00034543001;Parent=GSCOCG00034543001;Name=Cc10_g07280 | |
| 40814 chr10 manual_curation polypeptide 6175999 6177742 . + . ID=GSCOCP00034543001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SMART:SM00369,SwissProt:O49318,SwissProt:Q8VZG8,SwissProt:Q9LP24,TAIR:AT1G35710.1,TAIR:AT2G33170.1,TAIR:AT4G08850.1,TrEMBL:A5AGK9,TrEMBL:F6GSK7,TrEMBL:F6GSL0;Derives_from=GSCOCT00034543001;Name=Cc10_g07280;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:3.1.3.16,PRODUCT:Putative Probable leucine-rich repeat receptor-like protein kinase At1g35710,CC_functional_completeness:complete,CC_gene:At1g35710,CC_gene:At4g08850,CC_gene:At2g33170;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034543001~ Putative Probable leucine-rich repeat receptor-like protein kinase At1g35710~ At1g35710~ complete;original_location=complement(join(2884054..2885203%2C2883460..2883629));owner=coffea | |
| 40815 chr10 manual_curation exon 6177573 6177742 . + . Parent=GSCOCT00034543001 | |
| 40816 chr10 manual_curation exon 6175999 6177148 . + . Parent=GSCOCT00034543001 | |
| 40817 chr10 manual_curation CDS 6177573 6177742 . + 1 Parent=GSCOCT00034543001 | |
| 40818 chr10 manual_curation CDS 6175999 6177148 . + 0 Parent=GSCOCT00034543001 | |
| 40819 chr10 manual_curation gene 6185469 6188658 . + . ID=GSCOCG00034542001;Name=Cc10_g07290 | |
| 40820 chr10 manual_curation mRNA 6185469 6188658 . + . ID=GSCOCT00034542001;Parent=GSCOCG00034542001;Name=Cc10_g07290 | |
| 40821 chr10 manual_curation polypeptide 6185469 6188658 . + . ID=GSCOCP00034542001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008266,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00109,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:Q8VZG8,SwissProt:Q9LP24,SwissProt:Q9SHI2,TAIR:AT1G17230.1,TAIR:AT1G35710.1,TAIR:AT4G08850.1,TrEMBL:A5AGK9,TrEMBL:D7LX56,TrEMBL:F6GSK7;Derives_from=GSCOCT00034542001;Name=Cc10_g07290;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0004713,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At4g08850,CC_functional_completeness:complete,CC_gene:At4g08850,CC_gene:At1g35710,CC_gene:At1g17230;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034542001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At4g08850~ At4g08850~ complete;original_location=complement(join(2873813..2875733%2C2872955..2873635%2C2872544..2872863));owner=coffea | |
| 40822 chr10 manual_curation exon 6188339 6188658 . + . Parent=GSCOCT00034542001 | |
| 40823 chr10 manual_curation exon 6187567 6188247 . + . Parent=GSCOCT00034542001 | |
| 40824 chr10 manual_curation exon 6185469 6187389 . + . Parent=GSCOCT00034542001 | |
| 40825 chr10 manual_curation CDS 6188339 6188658 . + 1 Parent=GSCOCT00034542001 | |
| 40826 chr10 manual_curation CDS 6187567 6188247 . + 1 Parent=GSCOCT00034542001 | |
| 40827 chr10 manual_curation CDS 6185469 6187389 . + 0 Parent=GSCOCT00034542001 | |
| 40828 chr10 manual_curation gene 6191159 6194116 . + . ID=GSCOCG00034540001;Name=Cc10_g07300 | |
| 40829 chr10 manual_curation mRNA 6191159 6194116 . + . ID=GSCOCT00034540001;Parent=GSCOCG00034540001;Name=Cc10_g07300 | |
| 40830 chr10 manual_curation polypeptide 6191288 6193863 . + . ID=GSCOCP00034540001;Dbxref=GENE3D:G3DSA:1.10.220.10,InterPro:IPR001464,InterPro:IPR009118,InterPro:IPR018252,InterPro:IPR018502,PANTHER:PTHR10502,PANTHER:PTHR10502:SF10,PFAM:PF00191,PRINTS:PR00196,PRINTS:PR01814,PROSITE:PS00223,SMART:SM00335,SUPERFAMILY:SSF47874,SwissProt:Q9LX07,SwissProt:Q9SYT0,SwissProt:Q9XEE2,TAIR:AT1G35720.1,TAIR:AT5G10230.1,TAIR:AT5G65020.1,TrEMBL:A9PA39,TrEMBL:A9PH68,TrEMBL:O82090;Derives_from=GSCOCT00034540001;Name=Cc10_g07300;Ontology_term=CC_evidence_code:ISS,GO:0005509,GO:0005544,CC_EC_number:missing_EC_number,PRODUCT:Annexin D1,CC_functional_completeness:complete,CC_gene:ANN1,CC_gene:ANN2,CC_gene:ANNAT7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034540001~ Annexin D1~ ANN1~ complete;original_location=complement(join(2869839..2869914%2C2868862..2869007%2C2868442..2868660%2C2867758..2867970%2C2867339..2867635));owner=coffea | |
| 40831 chr10 manual_curation exon 6193567 6194116 . + . Parent=GSCOCT00034540001 | |
| 40832 chr10 manual_curation exon 6193232 6193444 . + . Parent=GSCOCT00034540001 | |
| 40833 chr10 manual_curation exon 6192542 6192760 . + . Parent=GSCOCT00034540001 | |
| 40834 chr10 manual_curation exon 6192195 6192340 . + . Parent=GSCOCT00034540001 | |
| 40835 chr10 manual_curation exon 6191159 6191363 . + . Parent=GSCOCT00034540001 | |
| 40836 chr10 manual_curation CDS 6193567 6193863 . + 0 Parent=GSCOCT00034540001 | |
| 40837 chr10 manual_curation CDS 6193232 6193444 . + 0 Parent=GSCOCT00034540001 | |
| 40838 chr10 manual_curation CDS 6192542 6192760 . + 0 Parent=GSCOCT00034540001 | |
| 40839 chr10 manual_curation CDS 6192195 6192340 . + 1 Parent=GSCOCT00034540001 | |
| 40840 chr10 manual_curation CDS 6191288 6191363 . + 0 Parent=GSCOCT00034540001 | |
| 40841 chr10 manual_curation gene 6195446 6199625 . - . ID=GSCOCG00034539001;Name=Cc10_g07310 | |
| 40842 chr10 manual_curation mRNA 6195446 6199625 . - . ID=GSCOCT00034539001;Parent=GSCOCG00034539001;Name=Cc10_g07310 | |
| 40843 chr10 manual_curation polypeptide 6195446 6199625 . - . ID=GSCOCP00034539001;Dbxref=GENE3D:G3DSA:1.25.10.10,InterPro:IPR001313,InterPro:IPR011989,InterPro:IPR016024,PFAM:PF00806,PROFILE:PS50302,PROFILE:PS50303,SMART:SM00025,SUPERFAMILY:SSF48371,SwissProt:Q9C9R6,SwissProt:Q9LDW3,SwissProt:Q9LM20,TAIR:AT1G22240.1,TAIR:AT1G78160.1,TAIR:AT4G08840.1,TrEMBL:B9RJJ0,TrEMBL:F6H0P7,TrEMBL:F6HRB3;Derives_from=GSCOCT00034539001;Name=Cc10_g07310;Ontology_term=CC_evidence_code:ISS,GO:0003723,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:APUM7,CC_gene:APUM8,CC_gene:APUM11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034539001~ Putative uncharacterized protein~ APUM7~ fragment;original_location=join(2861577..2861952%2C2861992..2862262%2C2862374..2862536%2C2863550..2863713%2C2864580..2864835%2C2865649..2865756);owner=coffea | |
| 40844 chr10 manual_curation exon 6199250 6199625 . - . Parent=GSCOCT00034539001 | |
| 40845 chr10 manual_curation exon 6198940 6199210 . - . Parent=GSCOCT00034539001 | |
| 40846 chr10 manual_curation exon 6198666 6198828 . - . Parent=GSCOCT00034539001 | |
| 40847 chr10 manual_curation exon 6197489 6197652 . - . Parent=GSCOCT00034539001 | |
| 40848 chr10 manual_curation exon 6196367 6196622 . - . Parent=GSCOCT00034539001 | |
| 40849 chr10 manual_curation exon 6195446 6195553 . - . Parent=GSCOCT00034539001 | |
| 40850 chr10 manual_curation CDS 6199250 6199625 . - 0 Parent=GSCOCT00034539001 | |
| 40851 chr10 manual_curation CDS 6198940 6199210 . - 1 Parent=GSCOCT00034539001 | |
| 40852 chr10 manual_curation CDS 6198666 6198828 . - 2 Parent=GSCOCT00034539001 | |
| 40853 chr10 manual_curation CDS 6197489 6197652 . - 0 Parent=GSCOCT00034539001 | |
| 40854 chr10 manual_curation CDS 6196367 6196622 . - 2 Parent=GSCOCT00034539001 | |
| 40855 chr10 manual_curation CDS 6195446 6195553 . - 0 Parent=GSCOCT00034539001 | |
| 40856 chr10 manual_curation gene 6207489 6210645 . - . ID=GSCOCG00034538001;Name=Cc10_g07320 | |
| 40857 chr10 manual_curation mRNA 6207489 6210645 . - . ID=GSCOCT00034538001;Parent=GSCOCG00034538001;Name=Cc10_g07320 | |
| 40858 chr10 manual_curation polypeptide 6207785 6210354 . - . ID=GSCOCP00034538001;Dbxref=TAIR:AT1G35780.1,TAIR:AT1G78150.3,TAIR:AT4G39860.1,TrEMBL:A9P8J2,TrEMBL:B9H739,TrEMBL:B9RJJ0;Derives_from=GSCOCT00034538001;Name=Cc10_g07320;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034538001~ unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78150.2)%3B Has 145 Blast hits to 144 proteins in 16 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 145%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(2850848..2850985%2C2851120..2851193%2C2852143..2852278%2C2852367..2852651%2C2853145..2853417);owner=coffea | |
| 40859 chr10 manual_curation exon 6210217 6210645 . - . Parent=GSCOCT00034538001 | |
| 40860 chr10 manual_curation exon 6210009 6210082 . - . Parent=GSCOCT00034538001 | |
| 40861 chr10 manual_curation exon 6208924 6209059 . - . Parent=GSCOCT00034538001 | |
| 40862 chr10 manual_curation exon 6208551 6208835 . - . Parent=GSCOCT00034538001 | |
| 40863 chr10 manual_curation exon 6207489 6208057 . - . Parent=GSCOCT00034538001 | |
| 40864 chr10 manual_curation CDS 6210217 6210354 . - 0 Parent=GSCOCT00034538001 | |
| 40865 chr10 manual_curation CDS 6210009 6210082 . - 0 Parent=GSCOCT00034538001 | |
| 40866 chr10 manual_curation CDS 6208924 6209059 . - 2 Parent=GSCOCT00034538001 | |
| 40867 chr10 manual_curation CDS 6208551 6208835 . - 0 Parent=GSCOCT00034538001 | |
| 40868 chr10 manual_curation CDS 6207785 6208057 . - 0 Parent=GSCOCT00034538001 | |
| 40869 chr10 manual_curation gene 6218689 6223028 . + . ID=GSCOCG00034536001;Name=Cc10_g07330 | |
| 40870 chr10 manual_curation mRNA 6218689 6223028 . + . ID=GSCOCT00034536001;Parent=GSCOCG00034536001;Name=Cc10_g07330 | |
| 40871 chr10 manual_curation polypeptide 6218810 6222790 . + . ID=GSCOCP00034536001;Dbxref=InterPro:IPR013216,PFAM:PF08241,SwissProt:Q0WPT7,SwissProt:Q8LBV4,TAIR:AT1G78140.1,TAIR:AT2G41040.1,TrEMBL:B9GUU7,TrEMBL:E0CRJ5,TrEMBL:I1JVF7;Derives_from=GSCOCT00034536001;Name=Cc10_g07330;Ontology_term=CC_evidence_code:ISS,GO:0008152,GO:0008168,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterized methyltransferase At1g78140%2C chloroplastic,CC_functional_completeness:complete,CC_gene:At1g78140,CC_gene:At2g41040;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034536001~ Uncharacterized methyltransferase At1g78140%2C chloroplastic~ At1g78140~ complete;original_location=complement(join(2842201..2842392%2C2841643..2841746%2C2841379..2841519%2C2840737..2840821%2C2839991..2840184%2C2839773..2839884%2C2839144..2839251%2C2838412..2838552));owner=coffea | |
| 40872 chr10 manual_curation exon 6222650 6223028 . + . Parent=GSCOCT00034536001 | |
| 40873 chr10 manual_curation exon 6221951 6222058 . + . Parent=GSCOCT00034536001 | |
| 40874 chr10 manual_curation exon 6221318 6221429 . + . Parent=GSCOCT00034536001 | |
| 40875 chr10 manual_curation exon 6221018 6221211 . + . Parent=GSCOCT00034536001 | |
| 40876 chr10 manual_curation exon 6220381 6220465 . + . Parent=GSCOCT00034536001 | |
| 40877 chr10 manual_curation exon 6219683 6219823 . + . Parent=GSCOCT00034536001 | |
| 40878 chr10 manual_curation exon 6219456 6219559 . + . Parent=GSCOCT00034536001 | |
| 40879 chr10 manual_curation exon 6218689 6219001 . + . Parent=GSCOCT00034536001 | |
| 40880 chr10 manual_curation CDS 6222650 6222790 . + 0 Parent=GSCOCT00034536001 | |
| 40881 chr10 manual_curation CDS 6221951 6222058 . + 0 Parent=GSCOCT00034536001 | |
| 40882 chr10 manual_curation CDS 6221318 6221429 . + 2 Parent=GSCOCT00034536001 | |
| 40883 chr10 manual_curation CDS 6221018 6221211 . + 0 Parent=GSCOCT00034536001 | |
| 40884 chr10 manual_curation CDS 6220381 6220465 . + 2 Parent=GSCOCT00034536001 | |
| 40885 chr10 manual_curation CDS 6219683 6219823 . + 2 Parent=GSCOCT00034536001 | |
| 40886 chr10 manual_curation CDS 6219456 6219559 . + 0 Parent=GSCOCT00034536001 | |
| 40887 chr10 manual_curation CDS 6218810 6219001 . + 0 Parent=GSCOCT00034536001 | |
| 40888 chr10 manual_curation gene 6223659 6226284 . - . ID=GSCOCG00034535001;Name=Cc10_g07340 | |
| 40889 chr10 manual_curation mRNA 6223659 6226284 . - . ID=GSCOCT00034535001;Parent=GSCOCG00034535001;Name=Cc10_g07340 | |
| 40890 chr10 manual_curation polypeptide 6223659 6226066 . - . ID=GSCOCP00034535001;Dbxref=InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,PFAM:PF07690,PROFILE:PS50850,SUPERFAMILY:SSF103473,TAIR:AT1G78130.1,TAIR:AT4G36790.1,TAIR:AT5G10190.1,TrEMBL:B9RJI8,TrEMBL:F6I7E9,TrEMBL:I1MAS9;Derives_from=GSCOCT00034535001;Name=Cc10_g07340;Ontology_term=CC_evidence_code:ISS,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Major facilitator superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034535001~ Major facilitator superfamily protein~ unknown_gene~ complete;original_location=join(2835136..2835423%2C2835778..2836529%2C2837027..2837543);owner=coffea | |
| 40891 chr10 manual_curation exon 6225779 6226284 . - . Parent=GSCOCT00034535001 | |
| 40892 chr10 manual_curation exon 6224673 6225424 . - . Parent=GSCOCT00034535001 | |
| 40893 chr10 manual_curation exon 6223659 6224175 . - . Parent=GSCOCT00034535001 | |
| 40894 chr10 manual_curation CDS 6225779 6226066 . - 0 Parent=GSCOCT00034535001 | |
| 40895 chr10 manual_curation CDS 6224673 6225424 . - 0 Parent=GSCOCT00034535001 | |
| 40896 chr10 manual_curation CDS 6223659 6224175 . - 2 Parent=GSCOCT00034535001 | |
| 40897 chr10 manual_curation gene 6227646 6230486 . + . ID=GSCOCG00034534001;Name=Cc10_g07350 | |
| 40898 chr10 manual_curation mRNA 6227646 6230486 . + . ID=GSCOCT00034534001;Parent=GSCOCG00034534001;Name=Cc10_g07350 | |
| 40899 chr10 manual_curation polypeptide 6227646 6230486 . + . ID=GSCOCP00034534001;Dbxref=GENE3D:G3DSA:1.25.40.10,InterPro:IPR001440,InterPro:IPR002048,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR018247,InterPro:IPR018249,InterPro:IPR019734,PFAM:PF00515,PROFILE:PS50005,PROFILE:PS50222,PROFILE:PS50293,PROSITE:PS00018,SMART:SM00028,SMART:SM00054,SwissProt:O23052,SwissProt:Q8S8L9,SwissProt:Q9M8Y0,TAIR:AT1G05150.1,TAIR:AT2G32450.1,TAIR:AT3G04240.1,TrEMBL:B9GRG6,TrEMBL:B9H4I9,TrEMBL:F6GZQ8;Derives_from=GSCOCT00034534001;Name=Cc10_g07350;Ontology_term=CC_evidence_code:ISS,GO:0005488,GO:0005509,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterized TPR repeat-containing protein At1g05150,CC_functional_completeness:complete,CC_gene:At1g05150,CC_gene:At2g32450,CC_gene:SEC;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034534001~ Uncharacterized TPR repeat-containing protein At1g05150~ At1g05150~ complete;original_location=complement(join(2833104..2833556%2C2831020..2832974%2C2830716..2830878));owner=coffea | |
| 40900 chr10 manual_curation exon 6230324 6230486 . + . Parent=GSCOCT00034534001 | |
| 40901 chr10 manual_curation exon 6228228 6230182 . + . Parent=GSCOCT00034534001 | |
| 40902 chr10 manual_curation exon 6227646 6228098 . + . Parent=GSCOCT00034534001 | |
| 40903 chr10 manual_curation CDS 6230324 6230486 . + 2 Parent=GSCOCT00034534001 | |
| 40904 chr10 manual_curation CDS 6228228 6230182 . + 0 Parent=GSCOCT00034534001 | |
| 40905 chr10 manual_curation CDS 6227646 6228098 . + 0 Parent=GSCOCT00034534001 | |
| 40906 chr10 manual_curation gene 6242039 6243960 . - . ID=GSCOCG00034533001;Name=Cc10_g07360 | |
| 40907 chr10 manual_curation mRNA 6242039 6243960 . - . ID=GSCOCT00034533001;Parent=GSCOCG00034533001;Name=Cc10_g07360 | |
| 40908 chr10 manual_curation polypeptide 6242263 6243567 . - . ID=GSCOCP00034533001;Dbxref=InterPro:IPR008889,PFAM:PF05678,TAIR:AT1G35830.1,TAIR:AT4G39720.1,TAIR:AT5G65170.1,TrEMBL:A5BAY7,TrEMBL:B9RJI7,TrEMBL:F6H0W6;Derives_from=GSCOCT00034533001;Name=Cc10_g07360;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034533001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=2817635..2818939;owner=coffea | |
| 40909 chr10 manual_curation exon 6242039 6243960 . - . Parent=GSCOCT00034533001 | |
| 40910 chr10 manual_curation CDS 6242263 6243567 . - 0 Parent=GSCOCT00034533001 | |
| 40911 chr10 manual_curation gene 6252674 6256566 . + . ID=GSCOCG00034532001;Name=Cc10_g07370 | |
| 40912 chr10 manual_curation mRNA 6252674 6256566 . + . ID=GSCOCT00034532001;Parent=GSCOCG00034532001;Name=Cc10_g07370 | |
| 40913 chr10 manual_curation polypeptide 6252958 6255646 . + . ID=GSCOCP00034532001;Dbxref=GENE3D:G3DSA:1.25.40.10,InterPro:IPR001440,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR015609,InterPro:IPR019734,PANTHER:PTHR11821,PFAM:PF00515,PROFILE:PS50005,PROFILE:PS50293,SMART:SM00028,SwissProt:Q84JR9,SwissProt:Q9MAH1,SwissProt:Q9SIN1,TAIR:AT1G78120.1,TAIR:AT5G10090.1,TAIR:AT5G65160.1,TrEMBL:A9PHG9,TrEMBL:B9H538,TrEMBL:F6H0W5;Derives_from=GSCOCT00034532001;Name=Cc10_g07370;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:Putative Tetratricopeptide repeat (TPR)-like superfamily protein,CC_functional_completeness:modules,CC_gene:TTL3,CC_gene:TTL1,CC_gene:TTL4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034532001~ Putative Tetratricopeptide repeat (TPR)-like superfamily protein~ TTL3~ modules;original_location=complement(join(2807304..2808244%2C2806985..2807180%2C2806701..2806873%2C2806160..2806490%2C2805801..2806005%2C2805556..2805698));owner=coffea | |
| 40914 chr10 manual_curation exon 6252674 6252776 . + . Parent=GSCOCT00034532001 | |
| 40915 chr10 manual_curation exon 6255504 6256566 . + . Parent=GSCOCT00034532001 | |
| 40916 chr10 manual_curation exon 6255197 6255401 . + . Parent=GSCOCT00034532001 | |
| 40917 chr10 manual_curation exon 6254712 6255042 . + . Parent=GSCOCT00034532001 | |
| 40918 chr10 manual_curation exon 6254329 6254501 . + . Parent=GSCOCT00034532001 | |
| 40919 chr10 manual_curation exon 6254022 6254217 . + . Parent=GSCOCT00034532001 | |
| 40920 chr10 manual_curation exon 6252899 6253898 . + . Parent=GSCOCT00034532001 | |
| 40921 chr10 manual_curation CDS 6255504 6255646 . + 1 Parent=GSCOCT00034532001 | |
| 40922 chr10 manual_curation CDS 6255197 6255401 . + 0 Parent=GSCOCT00034532001 | |
| 40923 chr10 manual_curation CDS 6254712 6255042 . + 2 Parent=GSCOCT00034532001 | |
| 40924 chr10 manual_curation CDS 6254329 6254501 . + 0 Parent=GSCOCT00034532001 | |
| 40925 chr10 manual_curation CDS 6254022 6254217 . + 2 Parent=GSCOCT00034532001 | |
| 40926 chr10 manual_curation CDS 6252958 6253898 . + 0 Parent=GSCOCT00034532001 | |
| 40927 chr10 manual_curation gene 6258143 6259738 . - . ID=GSCOCG00034531001;Name=Cc10_g07380 | |
| 40928 chr10 manual_curation mRNA 6258143 6259738 . - . ID=GSCOCT00034531001;Parent=GSCOCG00034531001;Name=Cc10_g07380 | |
| 40929 chr10 manual_curation polypeptide 6258509 6259606 . - . ID=GSCOCP00034531001;Dbxref=TAIR:AT1G22230.1,TAIR:AT1G78110.1,TrEMBL:B9GUL6,TrEMBL:B9H745,TrEMBL:F6H0W4;Derives_from=GSCOCT00034531001;Name=Cc10_g07380;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034531001~ Putative unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 17 plant structures%3B EXPRESSED DURING: 7 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22230.1)%3B Has 5452 Blast hits to 3541 proteins in 289 species: Archae - 4%3B Bacteria - 165%3B Metazoa - 1756%3B Fungi - 532%3B Plants - 205%3B Viruses - 141%3B Other Eukaryotes - 2649 (source: NCBI BLink).~ unknown_gene~ complete;original_location=2801596..2802693;owner=coffea | |
| 40930 chr10 manual_curation exon 6258143 6259738 . - . Parent=GSCOCT00034531001 | |
| 40931 chr10 manual_curation CDS 6258509 6259606 . - 0 Parent=GSCOCT00034531001 | |
| 40932 chr10 manual_curation gene 6272607 6275303 . + . ID=GSCOCG00034529001;Name=Cc10_g07390 | |
| 40933 chr10 manual_curation mRNA 6272607 6275303 . + . ID=GSCOCT00034529001;Parent=GSCOCG00034529001;Name=Cc10_g07390 | |
| 40934 chr10 manual_curation polypeptide 6272607 6273815 . + . ID=GSCOCP00034529001;Dbxref=InterPro:IPR003690,PFAM:PF02536,SMART:SM00733,TAIR:AT1G21150.1,TAIR:AT5G07900.1,TAIR:AT5G64950.1,TrEMBL:B9GLU5,TrEMBL:B9RJI2,TrEMBL:F6H0W3;Derives_from=GSCOCT00034529001;Name=Cc10_g07390;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Mitochondrial transcription termination factor family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034529001~ Putative Mitochondrial transcription termination factor family protein~ unknown_gene~ complete;original_location=complement(2787387..2788595);owner=coffea | |
| 40935 chr10 manual_curation exon 6272607 6275303 . + . Parent=GSCOCT00034529001 | |
| 40936 chr10 manual_curation CDS 6272607 6273815 . + 0 Parent=GSCOCT00034529001 | |
| 40937 chr10 manual_curation gene 6278343 6279961 . - . ID=GSCOCG00034527001;Name=Cc10_g07400 | |
| 40938 chr10 manual_curation mRNA 6278343 6279961 . - . ID=GSCOCT00034527001;Parent=GSCOCG00034527001;Name=Cc10_g07400 | |
| 40939 chr10 manual_curation polypeptide 6278770 6279822 . - . ID=GSCOCP00034527001;Dbxref=InterPro:IPR001810,InterPro:IPR022364,PFAM:PF00646,PROFILE:PS50181,SUPERFAMILY:SSF81383,SwissProt:Q9C534,SwissProt:Q9C9S2,SwissProt:Q9LM18,TAIR:AT1G22220.1,TAIR:AT1G30200.2,TAIR:AT1G78100.1,TrEMBL:B9H746,TrEMBL:B9RJI1,TrEMBL:F6H0W1;Derives_from=GSCOCT00034527001;Name=Cc10_g07400;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative F-box protein At1g78100,CC_functional_completeness:complete,CC_gene:At1g78100,CC_gene:At1g22220,CC_gene:At1g30200;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034527001~ Putative F-box protein At1g78100~ At1g78100~ complete;original_location=2781380..2782432;owner=coffea | |
| 40940 chr10 manual_curation exon 6278343 6279961 . - . Parent=GSCOCT00034527001 | |
| 40941 chr10 manual_curation CDS 6278770 6279822 . - 0 Parent=GSCOCT00034527001 | |
| 40942 chr10 manual_curation gene 6302088 6304743 . - . ID=GSCOCG00034525001;Name=Cc10_g07410 | |
| 40943 chr10 manual_curation mRNA 6302088 6304743 . - . ID=GSCOCT00034525001;Parent=GSCOCG00034525001;Name=Cc10_g07410 | |
| 40944 chr10 manual_curation polypeptide 6302208 6304402 . - . ID=GSCOCP00034525001;Dbxref=InterPro:IPR003337,InterPro:IPR006379,PFAM:PF02358,SwissProt:F4KFG5,SwissProt:Q5HZ05,SwissProt:Q67X99,TAIR:AT2G22190.1,TAIR:AT5G10100.1,TAIR:AT5G65140.1,TIGRFAMs:TIGR00685,TIGRFAMs:TIGR01484,TrEMBL:B9T4H6,TrEMBL:E0CRI8,TrEMBL:F6I7F4;Derives_from=GSCOCT00034525001;Name=Cc10_g07410;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005992,GO:0008152,CC_EC_number:3.1.3.12,PRODUCT:Probable trehalose-phosphate phosphatase E,CC_functional_completeness:complete,CC_gene:TPPE,CC_gene:TPPJ,CC_gene:TPPI;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034525001~ Probable trehalose-phosphate phosphatase E~ TPPE~ complete;original_location=join(2756800..2757075%2C2757162..2757302%2C2757403..2757474%2C2757563..2757655%2C2757777..2757833%2C2757940..2758041%2C2758137..2758214%2C2758313..2758382%2C2758541..2758611%2C2758723..2758815%2C2758935..2758994);owner=coffea | |
| 40945 chr10 manual_curation exon 6304532 6304743 . - . Parent=GSCOCT00034525001 | |
| 40946 chr10 manual_curation exon 6304127 6304423 . - . Parent=GSCOCT00034525001 | |
| 40947 chr10 manual_curation exon 6303900 6304040 . - . Parent=GSCOCT00034525001 | |
| 40948 chr10 manual_curation exon 6303728 6303799 . - . Parent=GSCOCT00034525001 | |
| 40949 chr10 manual_curation exon 6303547 6303639 . - . Parent=GSCOCT00034525001 | |
| 40950 chr10 manual_curation exon 6303369 6303425 . - . Parent=GSCOCT00034525001 | |
| 40951 chr10 manual_curation exon 6303161 6303262 . - . Parent=GSCOCT00034525001 | |
| 40952 chr10 manual_curation exon 6302988 6303065 . - . Parent=GSCOCT00034525001 | |
| 40953 chr10 manual_curation exon 6302820 6302889 . - . Parent=GSCOCT00034525001 | |
| 40954 chr10 manual_curation exon 6302591 6302661 . - . Parent=GSCOCT00034525001 | |
| 40955 chr10 manual_curation exon 6302387 6302479 . - . Parent=GSCOCT00034525001 | |
| 40956 chr10 manual_curation exon 6302088 6302267 . - . Parent=GSCOCT00034525001 | |
| 40957 chr10 manual_curation CDS 6304127 6304402 . - 0 Parent=GSCOCT00034525001 | |
| 40958 chr10 manual_curation CDS 6303900 6304040 . - 0 Parent=GSCOCT00034525001 | |
| 40959 chr10 manual_curation CDS 6303728 6303799 . - 0 Parent=GSCOCT00034525001 | |
| 40960 chr10 manual_curation CDS 6303547 6303639 . - 0 Parent=GSCOCT00034525001 | |
| 40961 chr10 manual_curation CDS 6303369 6303425 . - 0 Parent=GSCOCT00034525001 | |
| 40962 chr10 manual_curation CDS 6303161 6303262 . - 0 Parent=GSCOCT00034525001 | |
| 40963 chr10 manual_curation CDS 6302988 6303065 . - 0 Parent=GSCOCT00034525001 | |
| 40964 chr10 manual_curation CDS 6302820 6302889 . - 0 Parent=GSCOCT00034525001 | |
| 40965 chr10 manual_curation CDS 6302591 6302661 . - 1 Parent=GSCOCT00034525001 | |
| 40966 chr10 manual_curation CDS 6302387 6302479 . - 0 Parent=GSCOCT00034525001 | |
| 40967 chr10 manual_curation CDS 6302208 6302267 . - 0 Parent=GSCOCT00034525001 | |
| 40968 chr10 manual_curation gene 6318197 6323447 . - . ID=GSCOCG00034524001;Name=Cc10_g07420 | |
| 40969 chr10 manual_curation mRNA 6318197 6323447 . - . ID=GSCOCT00034524001;Parent=GSCOCG00034524001;Name=Cc10_g07420 | |
| 40970 chr10 manual_curation polypeptide 6318610 6323180 . - . ID=GSCOCP00034524001;Dbxref=InterPro:IPR013596,PFAM:PF08387,TrEMBL:A5C5C2;Derives_from=GSCOCT00034524001;Name=Cc10_g07420;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034524001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(2738022..2738141%2C2738229..2738372%2C2742290..2742592);owner=coffea | |
| 40971 chr10 manual_curation exon 6323061 6323447 . - . Parent=GSCOCT00034524001 | |
| 40972 chr10 manual_curation exon 6322830 6322973 . - . Parent=GSCOCT00034524001 | |
| 40973 chr10 manual_curation exon 6318197 6318912 . - . Parent=GSCOCT00034524001 | |
| 40974 chr10 manual_curation CDS 6323061 6323180 . - 0 Parent=GSCOCT00034524001 | |
| 40975 chr10 manual_curation CDS 6322830 6322973 . - 0 Parent=GSCOCT00034524001 | |
| 40976 chr10 manual_curation CDS 6318610 6318912 . - 0 Parent=GSCOCT00034524001 | |
| 40977 chr10 manual_curation gene 6323793 6324885 . - . ID=GSCOCG00034523001;Name=Cc10_g07430 | |
| 40978 chr10 manual_curation mRNA 6323793 6324885 . - . ID=GSCOCT00034523001;Parent=GSCOCG00034523001;Name=Cc10_g07430 | |
| 40979 chr10 manual_curation polypeptide 6323793 6324260 . - . ID=GSCOCP00034523001;Dbxref=InterPro:IPR001810,InterPro:IPR022364,PROFILE:PS50181,SUPERFAMILY:SSF81383;Derives_from=GSCOCT00034523001;Name=Cc10_g07430;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034523001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(2736942..2736986%2C2737242..2737409);owner=coffea | |
| 40980 chr10 manual_curation exon 6324216 6324885 . - . Parent=GSCOCT00034523001 | |
| 40981 chr10 manual_curation exon 6323793 6323960 . - . Parent=GSCOCT00034523001 | |
| 40982 chr10 manual_curation CDS 6324216 6324260 . - 0 Parent=GSCOCT00034523001 | |
| 40983 chr10 manual_curation CDS 6323793 6323960 . - 0 Parent=GSCOCT00034523001 | |
| 40984 chr10 manual_curation gene 6343232 6347018 . + . ID=GSCOCG00034520001;Name=Cc10_g07440 | |
| 40985 chr10 manual_curation mRNA 6343232 6347018 . + . ID=GSCOCT00034520001;Parent=GSCOCG00034520001;Name=Cc10_g07440 | |
| 40986 chr10 manual_curation polypeptide 6343520 6347018 . + . ID=GSCOCP00034520001;Dbxref=SwissProt:Q66KH2,SwissProt:Q6NVS2,SwissProt:Q803I2,TAIR:AT1G22200.1,TAIR:AT1G36050.1,TAIR:AT3G22290.1,TrEMBL:B9GUL4,TrEMBL:B9H750,TrEMBL:I1MAS2;Derives_from=GSCOCT00034520001;Name=Cc10_g07440;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Endoplasmic reticulum vesicle transporter protein,CC_functional_completeness:fragment,CC_gene:ergic3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034520001~ Endoplasmic reticulum vesicle transporter protein~ ergic3~ fragment;original_location=complement(join(2717541..2717682%2C2715241..2715314%2C2714716..2714799%2C2714184..2714333));owner=coffea | |
| 40987 chr10 manual_curation exon 6346869 6347018 . + . Parent=GSCOCT00034520001 | |
| 40988 chr10 manual_curation exon 6346403 6346486 . + . Parent=GSCOCT00034520001 | |
| 40989 chr10 manual_curation exon 6345888 6345961 . + . Parent=GSCOCT00034520001 | |
| 40990 chr10 manual_curation exon 6343232 6343661 . + . Parent=GSCOCT00034520001 | |
| 40991 chr10 manual_curation CDS 6346869 6347018 . + 0 Parent=GSCOCT00034520001 | |
| 40992 chr10 manual_curation CDS 6346403 6346486 . + 0 Parent=GSCOCT00034520001 | |
| 40993 chr10 manual_curation CDS 6345888 6345961 . + 1 Parent=GSCOCT00034520001 | |
| 40994 chr10 manual_curation CDS 6343520 6343661 . + 0 Parent=GSCOCT00034520001 | |
| 40995 chr10 manual_curation gene 6347139 6351760 . + . ID=GSCOCG00034519001;Name=Cc10_g07450 | |
| 40996 chr10 manual_curation mRNA 6347139 6351760 . + . ID=GSCOCT00034519001;Parent=GSCOCG00034519001;Name=Cc10_g07450 | |
| 40997 chr10 manual_curation polypeptide 6347139 6351357 . + . ID=GSCOCP00034519001;Dbxref=InterPro:IPR012936,PFAM:PF07970,SwissProt:Q5EAE0,SwissProt:Q6NVS2,SwissProt:Q9CQE7,TAIR:AT1G22200.1,TAIR:AT1G36050.1,TAIR:AT3G22290.1,TrEMBL:B9H750,TrEMBL:E0CRI7;Derives_from=GSCOCT00034519001;Name=Cc10_g07450;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Endoplasmic reticulum-Golgi intermediate compartment protein 3,CC_functional_completeness:fragment,CC_gene:Ergic3,CC_gene:ergic3,CC_gene:ERGIC3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034519001~ Endoplasmic reticulum-Golgi intermediate compartment protein 3~ Ergic3~ fragment;original_location=complement(join(2713950..2714063%2C2713806..2713886%2C2713352..2713444%2C2712593..2712772%2C2712402..2712469%2C2712260..2712311%2C2710639..2710692%2C2710458..2710550%2C2710170..2710236%2C2709845..2709936));owner=coffea | |
| 40998 chr10 manual_curation exon 6351266 6351760 . + . Parent=GSCOCT00034519001 | |
| 40999 chr10 manual_curation exon 6350966 6351032 . + . Parent=GSCOCT00034519001 | |
| 41000 chr10 manual_curation exon 6350652 6350744 . + . Parent=GSCOCT00034519001 | |
| 41001 chr10 manual_curation exon 6350510 6350563 . + . Parent=GSCOCT00034519001 | |
| 41002 chr10 manual_curation exon 6348891 6348942 . + . Parent=GSCOCT00034519001 | |
| 41003 chr10 manual_curation exon 6348733 6348800 . + . Parent=GSCOCT00034519001 | |
| 41004 chr10 manual_curation exon 6348430 6348609 . + . Parent=GSCOCT00034519001 | |
| 41005 chr10 manual_curation exon 6347758 6347850 . + . Parent=GSCOCT00034519001 | |
| 41006 chr10 manual_curation exon 6347316 6347396 . + . Parent=GSCOCT00034519001 | |
| 41007 chr10 manual_curation exon 6347139 6347252 . + . Parent=GSCOCT00034519001 | |
| 41008 chr10 manual_curation CDS 6351266 6351357 . + 1 Parent=GSCOCT00034519001 | |
| 41009 chr10 manual_curation CDS 6350966 6351032 . + 0 Parent=GSCOCT00034519001 | |
| 41010 chr10 manual_curation CDS 6350652 6350744 . + 0 Parent=GSCOCT00034519001 | |
| 41011 chr10 manual_curation CDS 6350510 6350563 . + 0 Parent=GSCOCT00034519001 | |
| 41012 chr10 manual_curation CDS 6348891 6348942 . + 2 Parent=GSCOCT00034519001 | |
| 41013 chr10 manual_curation CDS 6348733 6348800 . + 0 Parent=GSCOCT00034519001 | |
| 41014 chr10 manual_curation CDS 6348430 6348609 . + 0 Parent=GSCOCT00034519001 | |
| 41015 chr10 manual_curation CDS 6347758 6347850 . + 0 Parent=GSCOCT00034519001 | |
| 41016 chr10 manual_curation CDS 6347316 6347396 . + 0 Parent=GSCOCT00034519001 | |
| 41017 chr10 manual_curation CDS 6347139 6347252 . + 0 Parent=GSCOCT00034519001 | |
| 41018 chr10 manual_curation gene 6357618 6359847 . - . ID=GSCOCG00034518001;Name=Cc10_g07460 | |
| 41019 chr10 manual_curation mRNA 6357618 6359847 . - . ID=GSCOCT00034518001;Parent=GSCOCG00034518001;Name=Cc10_g07460 | |
| 41020 chr10 manual_curation polypeptide 6357618 6359183 . - . ID=GSCOCP00034518001;Dbxref=GENE3D:G3DSA:3.30.730.10,InterPro:IPR001471,InterPro:IPR016177,PFAM:PF00847,PRINTS:PR00367,PROFILE:PS51032,SMART:SM00380,SUPERFAMILY:SSF54171,SwissProt:O65665,SwissProt:Q8H1E4,SwissProt:Q9LM15,TAIR:AT1G22190.1,TAIR:AT1G78080.1,TAIR:AT4G39780.1,TrEMBL:B9RJH6,TrEMBL:F8THI6,TrEMBL:Q8GZE8;Derives_from=GSCOCT00034518001;Name=Cc10_g07460;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,CC_EC_number:missing_EC_number,PRODUCT:Ethylene-responsive transcription factor RAP2-4,CC_functional_completeness:complete,CC_gene:RAP2-4,CC_gene:ERF060,CC_gene:RAP2-13;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034518001~ Ethylene-responsive transcription factor RAP2-4~ RAP2-4~ complete;original_location=join(2702019..2702085%2C2702278..2703076%2C2703458..2703584);owner=coffea | |
| 41021 chr10 manual_curation exon 6359117 6359847 . - . Parent=GSCOCT00034518001 | |
| 41022 chr10 manual_curation exon 6358126 6358924 . - . Parent=GSCOCT00034518001 | |
| 41023 chr10 manual_curation exon 6357618 6357744 . - . Parent=GSCOCT00034518001 | |
| 41024 chr10 manual_curation CDS 6359117 6359183 . - 0 Parent=GSCOCT00034518001 | |
| 41025 chr10 manual_curation CDS 6358126 6358924 . - 1 Parent=GSCOCT00034518001 | |
| 41026 chr10 manual_curation CDS 6357618 6357744 . - 2 Parent=GSCOCT00034518001 | |
| 41027 chr10 manual_curation gene 6372939 6379963 . - . ID=GSCOCG00034517001;Name=Cc10_g07470 | |
| 41028 chr10 manual_curation mRNA 6372939 6379963 . - . ID=GSCOCT00034517001;Parent=GSCOCG00034517001;Name=Cc10_g07470 | |
| 41029 chr10 manual_curation polypeptide 6373290 6379709 . - . ID=GSCOCP00034517001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019775,InterPro:IPR019781,InterPro:IPR019782,PFAM:PF00400,PROFILE:PS50082,PROFILE:PS50294,PROSITE:PS00678,SMART:SM00320,SUPERFAMILY:SSF50978,SwissProt:Q00808,SwissProt:Q8YRI1,SwissProt:Q9Y7K5,TAIR:AT1G36070.1,TAIR:AT1G78070.1,TAIR:AT3G13340.1,TrEMBL:B9H752,TrEMBL:B9RJH4,TrEMBL:F6H0V9;Derives_from=GSCOCT00034517001;Name=Cc10_g07470;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized WD repeat-containing protein alr3466,CC_functional_completeness:fragment,CC_gene:SPBC2A9.03,CC_gene:alr3466,CC_gene:HET-E1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034517001~ Putative Uncharacterized WD repeat-containing protein alr3466~ SPBC2A9.03~ fragment;original_location=join(2681493..2681639%2C2681725..2681892%2C2682770..2682856%2C2683317..2683350%2C2684131..2684184%2C2684448..2684510%2C2684607..2684679%2C2685947..2686027%2C2686440..2686458%2C2686589..2686723%2C2686808..2686918%2C2687038..2687129%2C2687214..2687319%2C2687412..2687912);owner=coffea | |
| 41030 chr10 manual_curation exon 6379867 6379963 . - . Parent=GSCOCT00034517001 | |
| 41031 chr10 manual_curation exon 6379563 6379730 . - . Parent=GSCOCT00034517001 | |
| 41032 chr10 manual_curation exon 6379310 6379477 . - . Parent=GSCOCT00034517001 | |
| 41033 chr10 manual_curation exon 6378346 6378432 . - . Parent=GSCOCT00034517001 | |
| 41034 chr10 manual_curation exon 6377852 6377885 . - . Parent=GSCOCT00034517001 | |
| 41035 chr10 manual_curation exon 6377018 6377071 . - . Parent=GSCOCT00034517001 | |
| 41036 chr10 manual_curation exon 6376692 6376754 . - . Parent=GSCOCT00034517001 | |
| 41037 chr10 manual_curation exon 6376523 6376595 . - . Parent=GSCOCT00034517001 | |
| 41038 chr10 manual_curation exon 6375175 6375255 . - . Parent=GSCOCT00034517001 | |
| 41039 chr10 manual_curation exon 6374744 6374762 . - . Parent=GSCOCT00034517001 | |
| 41040 chr10 manual_curation exon 6374479 6374613 . - . Parent=GSCOCT00034517001 | |
| 41041 chr10 manual_curation exon 6374284 6374394 . - . Parent=GSCOCT00034517001 | |
| 41042 chr10 manual_curation exon 6374073 6374164 . - . Parent=GSCOCT00034517001 | |
| 41043 chr10 manual_curation exon 6373883 6373988 . - . Parent=GSCOCT00034517001 | |
| 41044 chr10 manual_curation exon 6372939 6373790 . - . Parent=GSCOCT00034517001 | |
| 41045 chr10 manual_curation CDS 6379563 6379709 . - 0 Parent=GSCOCT00034517001 | |
| 41046 chr10 manual_curation CDS 6379310 6379477 . - 0 Parent=GSCOCT00034517001 | |
| 41047 chr10 manual_curation CDS 6378346 6378432 . - 0 Parent=GSCOCT00034517001 | |
| 41048 chr10 manual_curation CDS 6377852 6377885 . - 0 Parent=GSCOCT00034517001 | |
| 41049 chr10 manual_curation CDS 6377018 6377071 . - 1 Parent=GSCOCT00034517001 | |
| 41050 chr10 manual_curation CDS 6376692 6376754 . - 1 Parent=GSCOCT00034517001 | |
| 41051 chr10 manual_curation CDS 6376523 6376595 . - 1 Parent=GSCOCT00034517001 | |
| 41052 chr10 manual_curation CDS 6375175 6375255 . - 2 Parent=GSCOCT00034517001 | |
| 41053 chr10 manual_curation CDS 6374744 6374762 . - 2 Parent=GSCOCT00034517001 | |
| 41054 chr10 manual_curation CDS 6374479 6374613 . - 0 Parent=GSCOCT00034517001 | |
| 41055 chr10 manual_curation CDS 6374284 6374394 . - 0 Parent=GSCOCT00034517001 | |
| 41056 chr10 manual_curation CDS 6374073 6374164 . - 0 Parent=GSCOCT00034517001 | |
| 41057 chr10 manual_curation CDS 6373883 6373988 . - 2 Parent=GSCOCT00034517001 | |
| 41058 chr10 manual_curation CDS 6373290 6373790 . - 0 Parent=GSCOCT00034517001 | |
| 41059 chr10 manual_curation gene 6392167 6395926 . + . ID=GSCOCG00034516001;Name=Cc10_g07480 | |
| 41060 chr10 manual_curation mRNA 6392167 6395926 . + . ID=GSCOCT00034516001;Parent=GSCOCG00034516001;Name=Cc10_g07480 | |
| 41061 chr10 manual_curation polypeptide 6392167 6395926 . + . ID=GSCOCP00034516001;Dbxref=GENE3D:G3DSA:3.20.20.300,InterPro:IPR001764,InterPro:IPR002772,InterPro:IPR017853,PFAM:PF00933,PFAM:PF01915,PRINTS:PR00133,SUPERFAMILY:SSF51445,SUPERFAMILY:SSF52279,SwissProt:Q9LJN4,SwissProt:Q9LXA8,SwissProt:Q9SGZ5,TAIR:AT1G78060.1,TAIR:AT3G19620.1,TAIR:AT5G10560.1,TrEMBL:B9GUL1,TrEMBL:B9RJH3,TrEMBL:F6H0V7;Derives_from=GSCOCT00034516001;Name=Cc10_g07480;Ontology_term=CC_evidence_code:ISS,GO:0005975,CC_EC_number:3.2.1.21,PRODUCT:Probable beta-D-xylosidase 7,CC_functional_completeness:complete,CC_gene:BXL7,CC_gene:BXL6,CC_gene:BXL5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034516001~ Probable beta-D-xylosidase 7~ BXL7~ complete;original_location=complement(join(2668622..2669035%2C2667870..2668172%2C2667451..2667620%2C2667224..2667321%2C2666020..2666784%2C2665276..2665871));owner=coffea | |
| 41062 chr10 manual_curation exon 6395331 6395926 . + . Parent=GSCOCT00034516001 | |
| 41063 chr10 manual_curation exon 6394418 6395182 . + . Parent=GSCOCT00034516001 | |
| 41064 chr10 manual_curation exon 6393881 6393978 . + . Parent=GSCOCT00034516001 | |
| 41065 chr10 manual_curation exon 6393582 6393751 . + . Parent=GSCOCT00034516001 | |
| 41066 chr10 manual_curation exon 6393030 6393332 . + . Parent=GSCOCT00034516001 | |
| 41067 chr10 manual_curation exon 6392167 6392580 . + . Parent=GSCOCT00034516001 | |
| 41068 chr10 manual_curation CDS 6395331 6395926 . + 1 Parent=GSCOCT00034516001 | |
| 41069 chr10 manual_curation CDS 6394418 6395182 . + 1 Parent=GSCOCT00034516001 | |
| 41070 chr10 manual_curation CDS 6393881 6393978 . + 2 Parent=GSCOCT00034516001 | |
| 41071 chr10 manual_curation CDS 6393582 6393751 . + 0 Parent=GSCOCT00034516001 | |
| 41072 chr10 manual_curation CDS 6393030 6393332 . + 0 Parent=GSCOCT00034516001 | |
| 41073 chr10 manual_curation CDS 6392167 6392580 . + 0 Parent=GSCOCT00034516001 | |
| 41074 chr10 manual_curation gene 6398539 6408038 . + . ID=GSCOCG00034515001;Name=Cc10_g07490 | |
| 41075 chr10 manual_curation mRNA 6398539 6408038 . + . ID=GSCOCT00034515001;Parent=GSCOCG00034515001;Name=Cc10_g07490 | |
| 41076 chr10 manual_curation polypeptide 6398539 6407773 . + . ID=GSCOCP00034515001;Dbxref=GENE3D:G3DSA:3.20.20.300,InterPro:IPR001764,InterPro:IPR002772,InterPro:IPR017853,PFAM:PF00933,PFAM:PF01915,PRINTS:PR00133,SUPERFAMILY:SSF51445,SUPERFAMILY:SSF52279,SwissProt:Q9LJN4,SwissProt:Q9LXA8,SwissProt:Q9SGZ5,TAIR:AT1G78060.1,TAIR:AT3G19620.1,TAIR:AT5G10560.1,TrEMBL:B9GUL1,TrEMBL:B9RJH3,TrEMBL:H1AC33;Derives_from=GSCOCT00034515001;Name=Cc10_g07490;Ontology_term=CC_evidence_code:ISS,GO:0005975,CC_EC_number:3.2.1.21,PRODUCT:Probable beta-D-xylosidase 7,CC_functional_completeness:complete,CC_gene:BXL7,CC_gene:BXL6,CC_gene:BXL5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034515001~ Probable beta-D-xylosidase 7~ BXL7~ complete;original_location=complement(join(2662268..2662663%2C2661576..2661899%2C2661219..2661376%2C2661031..2661128%2C2660127..2660768%2C2660005..2660067%2C2659653..2659866%2C2659433..2659565%2C2658023..2658346%2C2657445..2657747%2C2656404..2656573%2C2656010..2656107%2C2654130..2654891%2C2653429..2654024));owner=coffea | |
| 41077 chr10 manual_curation exon 6407178 6408038 . + . Parent=GSCOCT00034515001 | |
| 41078 chr10 manual_curation exon 6406311 6407072 . + . Parent=GSCOCT00034515001 | |
| 41079 chr10 manual_curation exon 6405095 6405192 . + . Parent=GSCOCT00034515001 | |
| 41080 chr10 manual_curation exon 6404629 6404798 . + . Parent=GSCOCT00034515001 | |
| 41081 chr10 manual_curation exon 6403455 6403757 . + . Parent=GSCOCT00034515001 | |
| 41082 chr10 manual_curation exon 6402856 6403179 . + . Parent=GSCOCT00034515001 | |
| 41083 chr10 manual_curation exon 6401637 6401769 . + . Parent=GSCOCT00034515001 | |
| 41084 chr10 manual_curation exon 6401336 6401549 . + . Parent=GSCOCT00034515001 | |
| 41085 chr10 manual_curation exon 6401135 6401197 . + . Parent=GSCOCT00034515001 | |
| 41086 chr10 manual_curation exon 6400434 6401075 . + . Parent=GSCOCT00034515001 | |
| 41087 chr10 manual_curation exon 6400074 6400171 . + . Parent=GSCOCT00034515001 | |
| 41088 chr10 manual_curation exon 6399826 6399983 . + . Parent=GSCOCT00034515001 | |
| 41089 chr10 manual_curation exon 6399303 6399626 . + . Parent=GSCOCT00034515001 | |
| 41090 chr10 manual_curation exon 6398539 6398934 . + . Parent=GSCOCT00034515001 | |
| 41091 chr10 manual_curation CDS 6407178 6407773 . + 1 Parent=GSCOCT00034515001 | |
| 41092 chr10 manual_curation CDS 6406311 6407072 . + 1 Parent=GSCOCT00034515001 | |
| 41093 chr10 manual_curation CDS 6405095 6405192 . + 2 Parent=GSCOCT00034515001 | |
| 41094 chr10 manual_curation CDS 6404629 6404798 . + 0 Parent=GSCOCT00034515001 | |
| 41095 chr10 manual_curation CDS 6403455 6403757 . + 0 Parent=GSCOCT00034515001 | |
| 41096 chr10 manual_curation CDS 6402856 6403179 . + 0 Parent=GSCOCT00034515001 | |
| 41097 chr10 manual_curation CDS 6401637 6401769 . + 2 Parent=GSCOCT00034515001 | |
| 41098 chr10 manual_curation CDS 6401336 6401549 . + 1 Parent=GSCOCT00034515001 | |
| 41099 chr10 manual_curation CDS 6401135 6401197 . + 1 Parent=GSCOCT00034515001 | |
| 41100 chr10 manual_curation CDS 6400434 6401075 . + 1 Parent=GSCOCT00034515001 | |
| 41101 chr10 manual_curation CDS 6400074 6400171 . + 2 Parent=GSCOCT00034515001 | |
| 41102 chr10 manual_curation CDS 6399826 6399983 . + 0 Parent=GSCOCT00034515001 | |
| 41103 chr10 manual_curation CDS 6399303 6399626 . + 0 Parent=GSCOCT00034515001 | |
| 41104 chr10 manual_curation CDS 6398539 6398934 . + 0 Parent=GSCOCT00034515001 | |
| 41105 chr10 manual_curation gene 6419573 6428629 . + . ID=GSCOCG00034514001;Name=Cc10_g07500 | |
| 41106 chr10 manual_curation mRNA 6419573 6428629 . + . ID=GSCOCT00034514001;Parent=GSCOCG00034514001;Name=Cc10_g07500 | |
| 41107 chr10 manual_curation polypeptide 6421047 6427659 . + . ID=GSCOCP00034514001;Dbxref=SwissProt:O94387,SwissProt:Q00416,SwissProt:Q92355,TAIR:AT1G16800.1,TAIR:AT2G19120.1,TAIR:AT4G30100.1,TrEMBL:A5BNC8,TrEMBL:B9RJG9,TrEMBL:F6H0V5;Derives_from=GSCOCT00034514001;Name=Cc10_g07500;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:P-loop containing nucleoside triphosphate hydrolases superfamily protein,CC_functional_completeness:complete,CC_gene:SEN1,CC_gene:SPBC29A10.10c,CC_gene:sen1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034514001~ P-loop containing nucleoside triphosphate hydrolases superfamily protein~ SEN1~ complete;original_location=complement(join(2638808..2640155%2C2637229..2637411%2C2636447..2636542%2C2636203..2636365%2C2635943..2636075%2C2634091..2635857%2C2633543..2633965));owner=coffea | |
| 41108 chr10 manual_curation exon 6419573 6419607 . + . Parent=GSCOCT00034514001 | |
| 41109 chr10 manual_curation exon 6427237 6428629 . + . Parent=GSCOCT00034514001 | |
| 41110 chr10 manual_curation exon 6425345 6427111 . + . Parent=GSCOCT00034514001 | |
| 41111 chr10 manual_curation exon 6425127 6425259 . + . Parent=GSCOCT00034514001 | |
| 41112 chr10 manual_curation exon 6424837 6424999 . + . Parent=GSCOCT00034514001 | |
| 41113 chr10 manual_curation exon 6424660 6424755 . + . Parent=GSCOCT00034514001 | |
| 41114 chr10 manual_curation exon 6423791 6423973 . + . Parent=GSCOCT00034514001 | |
| 41115 chr10 manual_curation exon 6420878 6422394 . + . Parent=GSCOCT00034514001 | |
| 41116 chr10 manual_curation CDS 6427237 6427659 . + 0 Parent=GSCOCT00034514001 | |
| 41117 chr10 manual_curation CDS 6425345 6427111 . + 0 Parent=GSCOCT00034514001 | |
| 41118 chr10 manual_curation CDS 6425127 6425259 . + 2 Parent=GSCOCT00034514001 | |
| 41119 chr10 manual_curation CDS 6424837 6424999 . + 1 Parent=GSCOCT00034514001 | |
| 41120 chr10 manual_curation CDS 6424660 6424755 . + 1 Parent=GSCOCT00034514001 | |
| 41121 chr10 manual_curation CDS 6423791 6423973 . + 1 Parent=GSCOCT00034514001 | |
| 41122 chr10 manual_curation CDS 6421047 6422394 . + 0 Parent=GSCOCT00034514001 | |
| 41123 chr10 manual_curation gene 6432254 6437870 . + . ID=GSCOCG00034513001;Name=Cc10_g07510 | |
| 41124 chr10 manual_curation mRNA 6432254 6437870 . + . ID=GSCOCT00034513001;Parent=GSCOCG00034513001;Name=Cc10_g07510 | |
| 41125 chr10 manual_curation polypeptide 6433981 6437391 . + . ID=GSCOCP00034513001;Dbxref=GENE3D:G3DSA:3.40.525.10,InterPro:IPR001251,InterPro:IPR008273,InterPro:IPR011074,PFAM:PF00650,PFAM:PF03765,PROFILE:PS50191,SMART:SM00516,SUPERFAMILY:SSF46938,SUPERFAMILY:SSF52087,SwissProt:P53860,SwissProt:Q55CU8,SwissProt:Q9UU99,TAIR:AT1G22180.2,TAIR:AT1G75170.1,TAIR:AT4G08690.2,TrEMBL:B9RJH0,TrEMBL:I1LVZ9,TrEMBL:I1MAR8;Derives_from=GSCOCT00034513001;Name=Cc10_g07510;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Sec14p-like phosphatidylinositol transfer family protein,CC_functional_completeness:complete,CC_gene:rsc5,CC_gene:SPCC23B6.04c,CC_gene:PDR16;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034513001~ Sec14p-like phosphatidylinositol transfer family protein~ rsc5~ complete;original_location=complement(join(2627147..2627221%2C2626830..2627006%2C2626076..2626174%2C2624839..2625085%2C2623811..2624208));owner=coffea | |
| 41126 chr10 manual_curation exon 6432254 6432581 . + . Parent=GSCOCT00034513001 | |
| 41127 chr10 manual_curation exon 6436994 6437870 . + . Parent=GSCOCT00034513001 | |
| 41128 chr10 manual_curation exon 6436117 6436363 . + . Parent=GSCOCT00034513001 | |
| 41129 chr10 manual_curation exon 6435028 6435126 . + . Parent=GSCOCT00034513001 | |
| 41130 chr10 manual_curation exon 6434196 6434372 . + . Parent=GSCOCT00034513001 | |
| 41131 chr10 manual_curation exon 6433866 6434055 . + . Parent=GSCOCT00034513001 | |
| 41132 chr10 manual_curation CDS 6436994 6437391 . + 1 Parent=GSCOCT00034513001 | |
| 41133 chr10 manual_curation CDS 6436117 6436363 . + 0 Parent=GSCOCT00034513001 | |
| 41134 chr10 manual_curation CDS 6435028 6435126 . + 0 Parent=GSCOCT00034513001 | |
| 41135 chr10 manual_curation CDS 6434196 6434372 . + 0 Parent=GSCOCT00034513001 | |
| 41136 chr10 manual_curation CDS 6433981 6434055 . + 0 Parent=GSCOCT00034513001 | |
| 41137 chr10 manual_curation gene 6460551 6465388 . - . ID=GSCOCG00034512001;Name=Cc10_g07520 | |
| 41138 chr10 manual_curation mRNA 6460551 6465388 . - . ID=GSCOCT00034512001;Parent=GSCOCG00034512001;Name=Cc10_g07520 | |
| 41139 chr10 manual_curation polypeptide 6461312 6464243 . - . ID=GSCOCP00034512001;Dbxref=HAMAP:MF_01039,InterPro:IPR001345,InterPro:IPR005952,InterPro:IPR013078,PANTHER:PTHR11931,PFAM:PF00300,PROSITE:PS00175,SMART:SM00855,SwissProt:Q256A6,SwissProt:Q6MEW4,SwissProt:Q821N6,TAIR:AT1G22170.1,TAIR:AT1G78050.1,TIGRFAMs:TIGR01258,TrEMBL:B9GUK5,TrEMBL:B9H756,TrEMBL:B9RJG7;Derives_from=GSCOCT00034512001;Name=Cc10_g07520;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0006096,GO:0008152,CC_EC_number:5.4.2.1,PRODUCT:2%2C3-bisphosphoglycerate-dependent phosphoglycerate mutase,CC_functional_completeness:modules,CC_gene:gpmA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034512001~ 2%2C3-bisphosphoglycerate-dependent phosphoglycerate mutase~ gpmA~ modules;original_location=join(2596959..2597229%2C2597390..2597613%2C2597897..2598015%2C2598101..2598257%2C2598336..2598437%2C2598512..2598631%2C2599846..2599890);owner=coffea | |
| 41140 chr10 manual_curation exon 6463973 6465388 . - . Parent=GSCOCT00034512001 | |
| 41141 chr10 manual_curation exon 6463589 6463812 . - . Parent=GSCOCT00034512001 | |
| 41142 chr10 manual_curation exon 6463187 6463305 . - . Parent=GSCOCT00034512001 | |
| 41143 chr10 manual_curation exon 6462945 6463101 . - . Parent=GSCOCT00034512001 | |
| 41144 chr10 manual_curation exon 6462765 6462866 . - . Parent=GSCOCT00034512001 | |
| 41145 chr10 manual_curation exon 6462571 6462690 . - . Parent=GSCOCT00034512001 | |
| 41146 chr10 manual_curation exon 6460551 6461356 . - . Parent=GSCOCT00034512001 | |
| 41147 chr10 manual_curation CDS 6463973 6464243 . - 0 Parent=GSCOCT00034512001 | |
| 41148 chr10 manual_curation CDS 6463589 6463812 . - 1 Parent=GSCOCT00034512001 | |
| 41149 chr10 manual_curation CDS 6463187 6463305 . - 0 Parent=GSCOCT00034512001 | |
| 41150 chr10 manual_curation CDS 6462945 6463101 . - 2 Parent=GSCOCT00034512001 | |
| 41151 chr10 manual_curation CDS 6462765 6462866 . - 0 Parent=GSCOCT00034512001 | |
| 41152 chr10 manual_curation CDS 6462571 6462690 . - 0 Parent=GSCOCT00034512001 | |
| 41153 chr10 manual_curation CDS 6461312 6461356 . - 0 Parent=GSCOCT00034512001 | |
| 41154 chr10 manual_curation gene 6469624 6470076 . - . ID=GSCOCG00034510001;Name=Cc10_g07530 | |
| 41155 chr10 manual_curation mRNA 6469624 6470076 . - . ID=GSCOCT00034510001;Parent=GSCOCG00034510001;Name=Cc10_g07530 | |
| 41156 chr10 manual_curation polypeptide 6469624 6470076 . - . ID=GSCOCP00034510001;Dbxref=InterPro:IPR002068,InterPro:IPR008978,PFAM:PF00011,PROFILE:PS01031,SUPERFAMILY:SSF49764,SwissProt:P04793,SwissProt:P05478,SwissProt:P27879,TAIR:AT1G07400.1,TAIR:AT1G53540.1,TAIR:AT1G59860.1,TrEMBL:A3FPF5,TrEMBL:A5AND9,TrEMBL:B9HYD1;Derives_from=GSCOCT00034510001;Name=Cc10_g07530;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative 18.5 kDa class I heat shock protein,CC_functional_completeness:complete,CC_gene:HSP18.5-C,CC_gene:HSP18.1,CC_gene:HSP17.5-M;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034510001~ Putative 18.5 kDa class I heat shock protein~ HSP18.5-C~ complete;original_location=2591126..2591578;owner=coffea | |
| 41157 chr10 manual_curation exon 6469624 6470076 . - . Parent=GSCOCT00034510001 | |
| 41158 chr10 manual_curation CDS 6469624 6470076 . - 0 Parent=GSCOCT00034510001 | |
| 41159 chr10 manual_curation gene 6487073 6491375 . + . ID=GSCOCG00034509001;Name=Cc10_g07540 | |
| 41160 chr10 manual_curation mRNA 6487073 6491375 . + . ID=GSCOCT00034509001;Parent=GSCOCG00034509001;Name=Cc10_g07540 | |
| 41161 chr10 manual_curation polypeptide 6487073 6491172 . + . ID=GSCOCP00034509001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR001547,InterPro:IPR008999,InterPro:IPR013781,InterPro:IPR017853,InterPro:IPR018087,PFAM:PF00150,PROSITE:PS00659,SUPERFAMILY:SSF50405,SUPERFAMILY:SSF51445,SwissProt:A2RAR6,SwissProt:B0XN12,SwissProt:Q5B5X8,TrEMBL:B9RJG5,TrEMBL:E0CRH7,TrEMBL:I1LW02;Derives_from=GSCOCT00034509001;Name=Cc10_g07540;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0043169,CC_EC_number:3.2.1.58,PRODUCT:Putative Probable glucan 1%2C3-beta-glucosidase A,CC_functional_completeness:modules,CC_gene:exgA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034509001~ Putative Probable glucan 1%2C3-beta-glucosidase A~ exgA~ modules;original_location=complement(join(2573935..2574129%2C2573621..2573740%2C2573318..2573515%2C2571544..2571702%2C2571250..2571419%2C2570782..2570937%2C2570307..2570659%2C2570030..2570211));owner=coffea | |
| 41162 chr10 manual_curation exon 6490991 6491375 . + . Parent=GSCOCT00034509001 | |
| 41163 chr10 manual_curation exon 6490543 6490895 . + . Parent=GSCOCT00034509001 | |
| 41164 chr10 manual_curation exon 6490265 6490420 . + . Parent=GSCOCT00034509001 | |
| 41165 chr10 manual_curation exon 6489783 6489952 . + . Parent=GSCOCT00034509001 | |
| 41166 chr10 manual_curation exon 6489500 6489658 . + . Parent=GSCOCT00034509001 | |
| 41167 chr10 manual_curation exon 6487687 6487884 . + . Parent=GSCOCT00034509001 | |
| 41168 chr10 manual_curation exon 6487462 6487581 . + . Parent=GSCOCT00034509001 | |
| 41169 chr10 manual_curation exon 6487073 6487267 . + . Parent=GSCOCT00034509001 | |
| 41170 chr10 manual_curation CDS 6490991 6491172 . + 1 Parent=GSCOCT00034509001 | |
| 41171 chr10 manual_curation CDS 6490543 6490895 . + 2 Parent=GSCOCT00034509001 | |
| 41172 chr10 manual_curation CDS 6490265 6490420 . + 2 Parent=GSCOCT00034509001 | |
| 41173 chr10 manual_curation CDS 6489783 6489952 . + 0 Parent=GSCOCT00034509001 | |
| 41174 chr10 manual_curation CDS 6489500 6489658 . + 0 Parent=GSCOCT00034509001 | |
| 41175 chr10 manual_curation CDS 6487687 6487884 . + 0 Parent=GSCOCT00034509001 | |
| 41176 chr10 manual_curation CDS 6487462 6487581 . + 0 Parent=GSCOCT00034509001 | |
| 41177 chr10 manual_curation CDS 6487073 6487267 . + 0 Parent=GSCOCT00034509001 | |
| 41178 chr10 manual_curation gene 6573115 6573787 . - . ID=GSCOCG00034507001;Name=Cc10_g07550 | |
| 41179 chr10 manual_curation mRNA 6573115 6573787 . - . ID=GSCOCT00034507001;Parent=GSCOCG00034507001;Name=Cc10_g07550 | |
| 41180 chr10 manual_curation polypeptide 6573334 6573676 . - . ID=GSCOCP00034507001;Dbxref=InterPro:IPR009438,PFAM:PF06404;Derives_from=GSCOCT00034507001;Name=Cc10_g07550;Ontology_term=CC_evidence_code:ISS,GO:0005576,GO:0008083,GO:0008283,CC_EC_number:missing_EC_number,PRODUCT:Putative Phytosulfokine,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034507001~ Putative Phytosulfokine~ unknown_gene~ complete;original_location=join(2487526..2487627%2C2487731..2487868);owner=coffea | |
| 41181 chr10 manual_curation exon 6573575 6573787 . - . Parent=GSCOCT00034507001 | |
| 41182 chr10 manual_curation exon 6573115 6573471 . - . Parent=GSCOCT00034507001 | |
| 41183 chr10 manual_curation CDS 6573575 6573676 . - 0 Parent=GSCOCT00034507001 | |
| 41184 chr10 manual_curation CDS 6573334 6573471 . - 0 Parent=GSCOCT00034507001 | |
| 41185 chr10 manual_curation gene 6577345 6577695 . + . ID=GSCOCG00034506001;Name=Cc10_g07560 | |
| 41186 chr10 manual_curation mRNA 6577345 6577695 . + . ID=GSCOCT00034506001;Parent=GSCOCG00034506001;Name=Cc10_g07560 | |
| 41187 chr10 manual_curation polypeptide 6577345 6577695 . + . ID=GSCOCP00034506001;Dbxref=TrEMBL:A9PCJ9,TrEMBL:A9PE30,TrEMBL:E0CNZ3;Derives_from=GSCOCT00034506001;Name=Cc10_g07560;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Predicted protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034506001~ Predicted protein~ unknown_gene~ complete;original_location=complement(2483507..2483857);owner=coffea | |
| 41188 chr10 manual_curation exon 6577345 6577695 . + . Parent=GSCOCT00034506001 | |
| 41189 chr10 manual_curation CDS 6577345 6577695 . + 0 Parent=GSCOCT00034506001 | |
| 41190 chr10 manual_curation gene 6583963 6590671 . + . ID=GSCOCG00034504001;Name=Cc10_g07570 | |
| 41191 chr10 manual_curation mRNA 6583963 6590671 . + . ID=GSCOCT00034504001;Parent=GSCOCG00034504001;Name=Cc10_g07570 | |
| 41192 chr10 manual_curation polypeptide 6584152 6590242 . + . ID=GSCOCP00034504001;Dbxref=InterPro:IPR019141,PFAM:PF09741,TAIR:AT1G59520.3,TrEMBL:B9IBP1,TrEMBL:E0CNZ2,TrEMBL:I1K890;Derives_from=GSCOCT00034504001;Name=Cc10_g07570;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:CW7,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034504001~ CW7~ unknown_gene~ complete;original_location=complement(join(2477016..2477050%2C2476227..2476413%2C2476047..2476121%2C2475720..2475826%2C2475277..2475337%2C2474897..2474960%2C2474743..2474813%2C2473870..2474022%2C2472914..2472968%2C2471839..2471961%2C2471147..2471364%2C2470960..2470983));owner=coffea | |
| 41193 chr10 manual_curation exon 6590219 6590671 . + . Parent=GSCOCT00034504001 | |
| 41194 chr10 manual_curation exon 6589838 6590055 . + . Parent=GSCOCT00034504001 | |
| 41195 chr10 manual_curation exon 6589241 6589363 . + . Parent=GSCOCT00034504001 | |
| 41196 chr10 manual_curation exon 6588234 6588288 . + . Parent=GSCOCT00034504001 | |
| 41197 chr10 manual_curation exon 6587180 6587332 . + . Parent=GSCOCT00034504001 | |
| 41198 chr10 manual_curation exon 6586389 6586459 . + . Parent=GSCOCT00034504001 | |
| 41199 chr10 manual_curation exon 6586242 6586305 . + . Parent=GSCOCT00034504001 | |
| 41200 chr10 manual_curation exon 6585865 6585925 . + . Parent=GSCOCT00034504001 | |
| 41201 chr10 manual_curation exon 6585376 6585482 . + . Parent=GSCOCT00034504001 | |
| 41202 chr10 manual_curation exon 6585081 6585155 . + . Parent=GSCOCT00034504001 | |
| 41203 chr10 manual_curation exon 6584789 6584975 . + . Parent=GSCOCT00034504001 | |
| 41204 chr10 manual_curation exon 6583963 6584186 . + . Parent=GSCOCT00034504001 | |
| 41205 chr10 manual_curation CDS 6590219 6590242 . + 0 Parent=GSCOCT00034504001 | |
| 41206 chr10 manual_curation CDS 6589838 6590055 . + 1 Parent=GSCOCT00034504001 | |
| 41207 chr10 manual_curation CDS 6589241 6589363 . + 1 Parent=GSCOCT00034504001 | |
| 41208 chr10 manual_curation CDS 6588234 6588288 . + 0 Parent=GSCOCT00034504001 | |
| 41209 chr10 manual_curation CDS 6587180 6587332 . + 0 Parent=GSCOCT00034504001 | |
| 41210 chr10 manual_curation CDS 6586389 6586459 . + 1 Parent=GSCOCT00034504001 | |
| 41211 chr10 manual_curation CDS 6586242 6586305 . + 0 Parent=GSCOCT00034504001 | |
| 41212 chr10 manual_curation CDS 6585865 6585925 . + 2 Parent=GSCOCT00034504001 | |
| 41213 chr10 manual_curation CDS 6585376 6585482 . + 0 Parent=GSCOCT00034504001 | |
| 41214 chr10 manual_curation CDS 6585081 6585155 . + 0 Parent=GSCOCT00034504001 | |
| 41215 chr10 manual_curation CDS 6584789 6584975 . + 2 Parent=GSCOCT00034504001 | |
| 41216 chr10 manual_curation CDS 6584152 6584186 . + 0 Parent=GSCOCT00034504001 | |
| 41217 chr10 manual_curation gene 6594786 6595265 . + . ID=GSCOCG00034503001;Name=Cc10_g07580 | |
| 41218 chr10 manual_curation mRNA 6594786 6595265 . + . ID=GSCOCT00034503001;Parent=GSCOCG00034503001;Name=Cc10_g07580 | |
| 41219 chr10 manual_curation polypeptide 6594786 6595265 . + . ID=GSCOCP00034503001;Dbxref=InterPro:IPR004827,InterPro:IPR011616,PFAM:PF00170,PROFILE:PS50217,PROSITE:PS00036,SMART:SM00338,TAIR:AT1G13600.1,TAIR:AT2G18160.1,TAIR:AT3G49760.1,TrEMBL:A5CAY6,TrEMBL:B9IBP0,TrEMBL:F6I2E1;Derives_from=GSCOCT00034503001;Name=Cc10_g07580;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0043565,GO:0046983,CC_EC_number:missing_EC_number,PRODUCT:Putative basic leucine-zipper 5,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034503001~ Putative basic leucine-zipper 5~ unknown_gene~ complete;original_location=complement(2465937..2466416);owner=coffea | |
| 41220 chr10 manual_curation exon 6594786 6595265 . + . Parent=GSCOCT00034503001 | |
| 41221 chr10 manual_curation CDS 6594786 6595265 . + 0 Parent=GSCOCT00034503001 | |
| 41222 chr10 manual_curation gene 6602219 6609980 . + . ID=GSCOCG00034502001;Name=Cc10_g07590 | |
| 41223 chr10 manual_curation mRNA 6602219 6609980 . + . ID=GSCOCT00034502001;Parent=GSCOCG00034502001;Name=Cc10_g07590 | |
| 41224 chr10 manual_curation polypeptide 6602219 6609642 . + . ID=GSCOCP00034502001;Dbxref=GENE3D:G3DSA:3.40.850.10,InterPro:IPR001752,InterPro:IPR019821,PFAM:PF00225,PRINTS:PR00380,PROFILE:PS50067,PROSITE:PS00411,SMART:SM00129,SwissProt:Q02224,SwissProt:Q54NP8,SwissProt:Q6RT24,TAIR:AT1G59540.1,TAIR:AT2G21380.1,TAIR:AT3G10180.1,TrEMBL:B9IBN9,TrEMBL:B9R6W4,TrEMBL:E0CNZ1;Derives_from=GSCOCT00034502001;Name=Cc10_g07590;Ontology_term=CC_evidence_code:ISS,GO:0003777,GO:0005524,GO:0007018,CC_EC_number:missing_EC_number,PRODUCT:P-loop containing nucleoside triphosphate hydrolases superfamily protein,CC_functional_completeness:complete,CC_gene:CENPE,CC_gene:Cenpe,CC_gene:kif4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034502001~ P-loop containing nucleoside triphosphate hydrolases superfamily protein~ CENPE~ complete;original_location=complement(join(2458833..2458983%2C2458644..2458733%2C2458289..2458407%2C2458071..2458184%2C2457903..2457984%2C2457750..2457817%2C2457576..2457653%2C2457125..2457267%2C2456947..2457049%2C2456782..2456862%2C2456358..2456426%2C2456218..2456277%2C2456000..2456140%2C2455007..2455285%2C2454068..2454154%2C2453142..2453300%2C2452774..2453043%2C2451560..2451991));owner=coffea | |
| 41225 chr10 manual_curation exon 6609211 6609980 . + . Parent=GSCOCT00034502001 | |
| 41226 chr10 manual_curation exon 6608159 6608428 . + . Parent=GSCOCT00034502001 | |
| 41227 chr10 manual_curation exon 6607902 6608060 . + . Parent=GSCOCT00034502001 | |
| 41228 chr10 manual_curation exon 6607048 6607134 . + . Parent=GSCOCT00034502001 | |
| 41229 chr10 manual_curation exon 6605917 6606195 . + . Parent=GSCOCT00034502001 | |
| 41230 chr10 manual_curation exon 6605062 6605202 . + . Parent=GSCOCT00034502001 | |
| 41231 chr10 manual_curation exon 6604925 6604984 . + . Parent=GSCOCT00034502001 | |
| 41232 chr10 manual_curation exon 6604776 6604844 . + . Parent=GSCOCT00034502001 | |
| 41233 chr10 manual_curation exon 6604340 6604420 . + . Parent=GSCOCT00034502001 | |
| 41234 chr10 manual_curation exon 6604153 6604255 . + . Parent=GSCOCT00034502001 | |
| 41235 chr10 manual_curation exon 6603935 6604077 . + . Parent=GSCOCT00034502001 | |
| 41236 chr10 manual_curation exon 6603549 6603626 . + . Parent=GSCOCT00034502001 | |
| 41237 chr10 manual_curation exon 6603385 6603452 . + . Parent=GSCOCT00034502001 | |
| 41238 chr10 manual_curation exon 6603218 6603299 . + . Parent=GSCOCT00034502001 | |
| 41239 chr10 manual_curation exon 6603018 6603131 . + . Parent=GSCOCT00034502001 | |
| 41240 chr10 manual_curation exon 6602795 6602913 . + . Parent=GSCOCT00034502001 | |
| 41241 chr10 manual_curation exon 6602469 6602558 . + . Parent=GSCOCT00034502001 | |
| 41242 chr10 manual_curation exon 6602219 6602369 . + . Parent=GSCOCT00034502001 | |
| 41243 chr10 manual_curation CDS 6609211 6609642 . + 0 Parent=GSCOCT00034502001 | |
| 41244 chr10 manual_curation CDS 6608159 6608428 . + 0 Parent=GSCOCT00034502001 | |
| 41245 chr10 manual_curation CDS 6607902 6608060 . + 0 Parent=GSCOCT00034502001 | |
| 41246 chr10 manual_curation CDS 6607048 6607134 . + 0 Parent=GSCOCT00034502001 | |
| 41247 chr10 manual_curation CDS 6605917 6606195 . + 0 Parent=GSCOCT00034502001 | |
| 41248 chr10 manual_curation CDS 6605062 6605202 . + 0 Parent=GSCOCT00034502001 | |
| 41249 chr10 manual_curation CDS 6604925 6604984 . + 0 Parent=GSCOCT00034502001 | |
| 41250 chr10 manual_curation CDS 6604776 6604844 . + 0 Parent=GSCOCT00034502001 | |
| 41251 chr10 manual_curation CDS 6604340 6604420 . + 0 Parent=GSCOCT00034502001 | |
| 41252 chr10 manual_curation CDS 6604153 6604255 . + 2 Parent=GSCOCT00034502001 | |
| 41253 chr10 manual_curation CDS 6603935 6604077 . + 0 Parent=GSCOCT00034502001 | |
| 41254 chr10 manual_curation CDS 6603549 6603626 . + 0 Parent=GSCOCT00034502001 | |
| 41255 chr10 manual_curation CDS 6603385 6603452 . + 1 Parent=GSCOCT00034502001 | |
| 41256 chr10 manual_curation CDS 6603218 6603299 . + 0 Parent=GSCOCT00034502001 | |
| 41257 chr10 manual_curation CDS 6603018 6603131 . + 0 Parent=GSCOCT00034502001 | |
| 41258 chr10 manual_curation CDS 6602795 6602913 . + 1 Parent=GSCOCT00034502001 | |
| 41259 chr10 manual_curation CDS 6602469 6602558 . + 1 Parent=GSCOCT00034502001 | |
| 41260 chr10 manual_curation CDS 6602219 6602369 . + 0 Parent=GSCOCT00034502001 | |
| 41261 chr10 manual_curation gene 6615256 6617109 . + . ID=GSCOCG00034501001;Name=Cc10_g07600 | |
| 41262 chr10 manual_curation mRNA 6615256 6617109 . + . ID=GSCOCT00034501001;Parent=GSCOCG00034501001;Name=Cc10_g07600 | |
| 41263 chr10 manual_curation polypeptide 6615614 6616852 . + . ID=GSCOCP00034501001;Dbxref=TrEMBL:B9GNM2,TrEMBL:B9R6W3,TrEMBL:F6H178;Derives_from=GSCOCT00034501001;Name=Cc10_g07600;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034501001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=complement(join(2445148..2445588%2C2444911..2445022%2C2444350..2444819));owner=coffea | |
| 41264 chr10 manual_curation exon 6616383 6617109 . + . Parent=GSCOCT00034501001 | |
| 41265 chr10 manual_curation exon 6616180 6616291 . + . Parent=GSCOCT00034501001 | |
| 41266 chr10 manual_curation exon 6615256 6616054 . + . Parent=GSCOCT00034501001 | |
| 41267 chr10 manual_curation CDS 6616383 6616852 . + 1 Parent=GSCOCT00034501001 | |
| 41268 chr10 manual_curation CDS 6616180 6616291 . + 0 Parent=GSCOCT00034501001 | |
| 41269 chr10 manual_curation CDS 6615614 6616054 . + 0 Parent=GSCOCT00034501001 | |
| 41270 chr10 manual_curation gene 6617859 6628586 . - . ID=GSCOCG00034500001;Name=Cc10_g07610 | |
| 41271 chr10 manual_curation mRNA 6617859 6628586 . - . ID=GSCOCT00034500001;Parent=GSCOCG00034500001;Name=Cc10_g07610 | |
| 41272 chr10 manual_curation polypeptide 6618239 6628586 . - . ID=GSCOCP00034500001;Dbxref=GENE3D:G3DSA:1.10.10.440,InterPro:IPR001092,InterPro:IPR001202,InterPro:IPR002713,PFAM:PF00397,PFAM:PF01846,PROFILE:PS50020,PROFILE:PS50888,SMART:SM00441,SMART:SM00456,SUPERFAMILY:SSF51045,SUPERFAMILY:SSF81698,SwissProt:O75400,SwissProt:Q80W14,SwissProt:Q9R1C7,TAIR:AT1G44910.1,TAIR:AT3G19670.1,TrEMBL:B9EXB9,TrEMBL:B9IBN8,TrEMBL:F6H177;Derives_from=GSCOCT00034500001;Name=Cc10_g07610;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0030528,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:pre-mRNA-processing protein 40A,CC_functional_completeness:fragment,CC_gene:Prpf40a,CC_gene:PRPF40A,CC_gene:Prpf40b;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034500001~ pre-mRNA-processing protein 40A~ Prpf40a~ fragment;original_location=join(2432616..2432702%2C2433719..2433771%2C2433876..2433933%2C2434017..2434409%2C2434674..2434772%2C2434874..2434942%2C2435541..2435618%2C2435725..2435811%2C2436233..2436267%2C2436373..2436478%2C2436948..2437028%2C2437176..2437268%2C2437337..2437390%2C2437477..2437593%2C2437712..2437810%2C2439256..2439303%2C2439391..2439480%2C2440349..2440456%2C2440556..2440620%2C2440724..2440826%2C2442331..2442717%2C2442826..2442963);owner=coffea | |
| 41273 chr10 manual_curation exon 6628500 6628586 . - . Parent=GSCOCT00034500001 | |
| 41274 chr10 manual_curation exon 6627431 6627483 . - . Parent=GSCOCT00034500001 | |
| 41275 chr10 manual_curation exon 6627269 6627326 . - . Parent=GSCOCT00034500001 | |
| 41276 chr10 manual_curation exon 6626793 6627185 . - . Parent=GSCOCT00034500001 | |
| 41277 chr10 manual_curation exon 6626430 6626528 . - . Parent=GSCOCT00034500001 | |
| 41278 chr10 manual_curation exon 6626260 6626328 . - . Parent=GSCOCT00034500001 | |
| 41279 chr10 manual_curation exon 6625584 6625661 . - . Parent=GSCOCT00034500001 | |
| 41280 chr10 manual_curation exon 6625391 6625477 . - . Parent=GSCOCT00034500001 | |
| 41281 chr10 manual_curation exon 6624935 6624969 . - . Parent=GSCOCT00034500001 | |
| 41282 chr10 manual_curation exon 6624724 6624829 . - . Parent=GSCOCT00034500001 | |
| 41283 chr10 manual_curation exon 6624174 6624254 . - . Parent=GSCOCT00034500001 | |
| 41284 chr10 manual_curation exon 6623934 6624026 . - . Parent=GSCOCT00034500001 | |
| 41285 chr10 manual_curation exon 6623812 6623865 . - . Parent=GSCOCT00034500001 | |
| 41286 chr10 manual_curation exon 6623609 6623725 . - . Parent=GSCOCT00034500001 | |
| 41287 chr10 manual_curation exon 6623392 6623490 . - . Parent=GSCOCT00034500001 | |
| 41288 chr10 manual_curation exon 6621899 6621946 . - . Parent=GSCOCT00034500001 | |
| 41289 chr10 manual_curation exon 6621722 6621811 . - . Parent=GSCOCT00034500001 | |
| 41290 chr10 manual_curation exon 6620746 6620853 . - . Parent=GSCOCT00034500001 | |
| 41291 chr10 manual_curation exon 6620582 6620646 . - . Parent=GSCOCT00034500001 | |
| 41292 chr10 manual_curation exon 6620376 6620478 . - . Parent=GSCOCT00034500001 | |
| 41293 chr10 manual_curation exon 6618485 6618871 . - . Parent=GSCOCT00034500001 | |
| 41294 chr10 manual_curation exon 6617859 6618376 . - . Parent=GSCOCT00034500001 | |
| 41295 chr10 manual_curation CDS 6628500 6628586 . - 0 Parent=GSCOCT00034500001 | |
| 41296 chr10 manual_curation CDS 6627431 6627483 . - 0 Parent=GSCOCT00034500001 | |
| 41297 chr10 manual_curation CDS 6627269 6627326 . - 2 Parent=GSCOCT00034500001 | |
| 41298 chr10 manual_curation CDS 6626793 6627185 . - 0 Parent=GSCOCT00034500001 | |
| 41299 chr10 manual_curation CDS 6626430 6626528 . - 0 Parent=GSCOCT00034500001 | |
| 41300 chr10 manual_curation CDS 6626260 6626328 . - 0 Parent=GSCOCT00034500001 | |
| 41301 chr10 manual_curation CDS 6625584 6625661 . - 0 Parent=GSCOCT00034500001 | |
| 41302 chr10 manual_curation CDS 6625391 6625477 . - 0 Parent=GSCOCT00034500001 | |
| 41303 chr10 manual_curation CDS 6624935 6624969 . - 0 Parent=GSCOCT00034500001 | |
| 41304 chr10 manual_curation CDS 6624724 6624829 . - 2 Parent=GSCOCT00034500001 | |
| 41305 chr10 manual_curation CDS 6624174 6624254 . - 0 Parent=GSCOCT00034500001 | |
| 41306 chr10 manual_curation CDS 6623934 6624026 . - 0 Parent=GSCOCT00034500001 | |
| 41307 chr10 manual_curation CDS 6623812 6623865 . - 0 Parent=GSCOCT00034500001 | |
| 41308 chr10 manual_curation CDS 6623609 6623725 . - 0 Parent=GSCOCT00034500001 | |
| 41309 chr10 manual_curation CDS 6623392 6623490 . - 0 Parent=GSCOCT00034500001 | |
| 41310 chr10 manual_curation CDS 6621899 6621946 . - 0 Parent=GSCOCT00034500001 | |
| 41311 chr10 manual_curation CDS 6621722 6621811 . - 0 Parent=GSCOCT00034500001 | |
| 41312 chr10 manual_curation CDS 6620746 6620853 . - 0 Parent=GSCOCT00034500001 | |
| 41313 chr10 manual_curation CDS 6620582 6620646 . - 0 Parent=GSCOCT00034500001 | |
| 41314 chr10 manual_curation CDS 6620376 6620478 . - 2 Parent=GSCOCT00034500001 | |
| 41315 chr10 manual_curation CDS 6618485 6618871 . - 0 Parent=GSCOCT00034500001 | |
| 41316 chr10 manual_curation CDS 6618239 6618376 . - 0 Parent=GSCOCT00034500001 | |
| 41317 chr10 manual_curation gene 6628670 6631643 . - . ID=GSCOCG00034499001;Name=Cc10_g07620 | |
| 41318 chr10 manual_curation mRNA 6628670 6631643 . - . ID=GSCOCT00034499001;Parent=GSCOCG00034499001;Name=Cc10_g07620 | |
| 41319 chr10 manual_curation polypeptide 6628670 6631161 . - . ID=GSCOCP00034499001;Dbxref=InterPro:IPR001202,PFAM:PF00397,PROFILE:PS50020,PROSITE:PS01159,SMART:SM00456,SUPERFAMILY:SSF51045,TAIR:AT1G44910.1,TAIR:AT3G19670.1,TrEMBL:B9IBN8,TrEMBL:B9S7Z7,TrEMBL:F6H176;Derives_from=GSCOCT00034499001;Name=Cc10_g07620;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative pre-mRNA-processing protein 40A,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034499001~ Putative pre-mRNA-processing protein 40A~ unknown_gene~ fragment;original_location=join(2430041..2430076%2C2430443..2430508%2C2430608..2430931%2C2431007..2431162%2C2431977..2432020%2C2432224..2432293%2C2432482..2432532);owner=coffea | |
| 41320 chr10 manual_curation exon 6631126 6631643 . - . Parent=GSCOCT00034499001 | |
| 41321 chr10 manual_curation exon 6630694 6630759 . - . Parent=GSCOCT00034499001 | |
| 41322 chr10 manual_curation exon 6630271 6630594 . - . Parent=GSCOCT00034499001 | |
| 41323 chr10 manual_curation exon 6630040 6630195 . - . Parent=GSCOCT00034499001 | |
| 41324 chr10 manual_curation exon 6629182 6629225 . - . Parent=GSCOCT00034499001 | |
| 41325 chr10 manual_curation exon 6628909 6628978 . - . Parent=GSCOCT00034499001 | |
| 41326 chr10 manual_curation exon 6628670 6628720 . - . Parent=GSCOCT00034499001 | |
| 41327 chr10 manual_curation CDS 6631126 6631161 . - 0 Parent=GSCOCT00034499001 | |
| 41328 chr10 manual_curation CDS 6630694 6630759 . - 0 Parent=GSCOCT00034499001 | |
| 41329 chr10 manual_curation CDS 6630271 6630594 . - 0 Parent=GSCOCT00034499001 | |
| 41330 chr10 manual_curation CDS 6630040 6630195 . - 0 Parent=GSCOCT00034499001 | |
| 41331 chr10 manual_curation CDS 6629182 6629225 . - 0 Parent=GSCOCT00034499001 | |
| 41332 chr10 manual_curation CDS 6628909 6628978 . - 2 Parent=GSCOCT00034499001 | |
| 41333 chr10 manual_curation CDS 6628670 6628720 . - 0 Parent=GSCOCT00034499001 | |
| 41334 chr10 manual_curation gene 6633731 6634611 . - . ID=GSCOCG00034498001;Name=Cc10_g07630 | |
| 41335 chr10 manual_curation mRNA 6633731 6634611 . - . ID=GSCOCT00034498001;Parent=GSCOCG00034498001;Name=Cc10_g07630 | |
| 41336 chr10 manual_curation polypeptide 6633847 6634341 . - . ID=GSCOCP00034498001;Dbxref=TrEMBL:E0CNY8,TrEMBL:I1M8V9,TrEMBL:I1MXF8;Derives_from=GSCOCT00034498001;Name=Cc10_g07630;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034498001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=2426861..2427355;owner=coffea | |
| 41337 chr10 manual_curation exon 6633731 6634611 . - . Parent=GSCOCT00034498001 | |
| 41338 chr10 manual_curation CDS 6633847 6634341 . - 0 Parent=GSCOCT00034498001 | |
| 41339 chr10 manual_curation gene 6641526 6643213 . - . ID=GSCOCG00034497001;Name=Cc10_g07640 | |
| 41340 chr10 manual_curation mRNA 6641526 6643213 . - . ID=GSCOCT00034497001;Parent=GSCOCG00034497001;Name=Cc10_g07640 | |
| 41341 chr10 manual_curation polypeptide 6641984 6642280 . - . ID=GSCOCP00034497001;Derives_from=GSCOCT00034497001;Name=Cc10_g07640;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034497001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=2418922..2419218;owner=coffea | |
| 41342 chr10 manual_curation exon 6641526 6643213 . - . Parent=GSCOCT00034497001 | |
| 41343 chr10 manual_curation CDS 6641984 6642280 . - 0 Parent=GSCOCT00034497001 | |
| 41344 chr10 manual_curation gene 6645388 6649788 . - . ID=GSCOCG00034496001;Name=Cc10_g07650 | |
| 41345 chr10 manual_curation mRNA 6645388 6649788 . - . ID=GSCOCT00034496001;Parent=GSCOCG00034496001;Name=Cc10_g07650 | |
| 41346 chr10 manual_curation polypeptide 6645953 6649416 . - . ID=GSCOCP00034496001;Dbxref=InterPro:IPR014977,InterPro:IPR014978,PFAM:PF08879,PFAM:PF08880,TAIR:AT2G22840.1,TAIR:AT3G13960.1,TAIR:AT4G37740.1,TrEMBL:B9GNL9,TrEMBL:C8YZB0,TrEMBL:F6H175;Derives_from=GSCOCT00034496001;Name=Cc10_g07650;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0005634,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative growth-regulating factor 1,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034496001~ Putative growth-regulating factor 1~ unknown_gene~ complete;original_location=join(2411786..2412215%2C2412933..2413154%2C2413615..2413954%2C2414403..2415249);owner=coffea | |
| 41347 chr10 manual_curation exon 6648987 6649788 . - . Parent=GSCOCT00034496001 | |
| 41348 chr10 manual_curation exon 6648048 6648269 . - . Parent=GSCOCT00034496001 | |
| 41349 chr10 manual_curation exon 6647248 6647587 . - . Parent=GSCOCT00034496001 | |
| 41350 chr10 manual_curation exon 6645388 6646799 . - . Parent=GSCOCT00034496001 | |
| 41351 chr10 manual_curation CDS 6648987 6649416 . - 0 Parent=GSCOCT00034496001 | |
| 41352 chr10 manual_curation CDS 6648048 6648269 . - 1 Parent=GSCOCT00034496001 | |
| 41353 chr10 manual_curation CDS 6647248 6647587 . - 1 Parent=GSCOCT00034496001 | |
| 41354 chr10 manual_curation CDS 6645953 6646799 . - 2 Parent=GSCOCT00034496001 | |
| 41355 chr10 manual_curation gene 6668349 6670548 . + . ID=GSCOCG00034495001;Name=Cc10_g07660 | |
| 41356 chr10 manual_curation mRNA 6668349 6670548 . + . ID=GSCOCT00034495001;Parent=GSCOCG00034495001;Name=Cc10_g07660 | |
| 41357 chr10 manual_curation polypeptide 6668759 6670242 . + . ID=GSCOCP00034495001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR012677,PFAM:PF00076,PROFILE:PS50102,SMART:SM00360,SwissProt:O43347,SwissProt:Q61474,SwissProt:Q8K3P4,TAIR:AT1G58470.1,TAIR:AT3G07810.2,TAIR:AT4G14300.1,TrEMBL:A9NVN2,TrEMBL:I1JTT1,TrEMBL:I1K893;Derives_from=GSCOCT00034495001;Name=Cc10_g07660;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,CC_EC_number:missing_EC_number,PRODUCT:Putative RNA-binding protein 1,CC_functional_completeness:fragment,CC_gene:MSI1,CC_gene:Msi1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034495001~ Putative RNA-binding protein 1~ MSI1~ fragment;original_location=complement(join(2392216..2392443%2C2390960..2391628));owner=coffea | |
| 41358 chr10 manual_curation exon 6669574 6670548 . + . Parent=GSCOCT00034495001 | |
| 41359 chr10 manual_curation exon 6668349 6668986 . + . Parent=GSCOCT00034495001 | |
| 41360 chr10 manual_curation CDS 6669574 6670242 . + 0 Parent=GSCOCT00034495001 | |
| 41361 chr10 manual_curation CDS 6668759 6668986 . + 0 Parent=GSCOCT00034495001 | |
| 41362 chr10 manual_curation gene 6681258 6685025 . + . ID=GSCOCG00034493001;Name=Cc10_g07670 | |
| 41363 chr10 manual_curation mRNA 6681258 6685025 . + . ID=GSCOCT00034493001;Parent=GSCOCG00034493001;Name=Cc10_g07670 | |
| 41364 chr10 manual_curation polypeptide 6681560 6684618 . + . ID=GSCOCP00034493001;Dbxref=InterPro:IPR021414,PFAM:PF11255,TAIR:AT1G44920.1,TrEMBL:B9GNL7,TrEMBL:B9R6V7,TrEMBL:E0CNY5;Derives_from=GSCOCT00034493001;Name=Cc10_g07670;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034493001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3054 (InterPro:IPR021414)%3B Has 246 Blast hits to 246 proteins in 119 species: Archae - 14%3B Bacteria - 181%3B Metazoa - 0%3B Fungi - 0%3B Plants - 45%3B Viruses - 0%3B Other Eukaryotes - 6 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(2379290..2379642%2C2379058..2379185%2C2378839..2378951%2C2377255..2377440%2C2376584..2376613));owner=coffea | |
| 41365 chr10 manual_curation exon 6684589 6685025 . + . Parent=GSCOCT00034493001 | |
| 41366 chr10 manual_curation exon 6683762 6683947 . + . Parent=GSCOCT00034493001 | |
| 41367 chr10 manual_curation exon 6682251 6682363 . + . Parent=GSCOCT00034493001 | |
| 41368 chr10 manual_curation exon 6682017 6682144 . + . Parent=GSCOCT00034493001 | |
| 41369 chr10 manual_curation exon 6681258 6681912 . + . Parent=GSCOCT00034493001 | |
| 41370 chr10 manual_curation CDS 6684589 6684618 . + 0 Parent=GSCOCT00034493001 | |
| 41371 chr10 manual_curation CDS 6683762 6683947 . + 0 Parent=GSCOCT00034493001 | |
| 41372 chr10 manual_curation CDS 6682251 6682363 . + 1 Parent=GSCOCT00034493001 | |
| 41373 chr10 manual_curation CDS 6682017 6682144 . + 2 Parent=GSCOCT00034493001 | |
| 41374 chr10 manual_curation CDS 6681560 6681912 . + 0 Parent=GSCOCT00034493001 | |
| 41375 chr10 manual_curation gene 6695226 6697393 . + . ID=GSCOCG00034492001;Name=Cc10_g07680 | |
| 41376 chr10 manual_curation mRNA 6695226 6697393 . + . ID=GSCOCT00034492001;Parent=GSCOCG00034492001;Name=Cc10_g07680 | |
| 41377 chr10 manual_curation polypeptide 6695961 6697393 . + . ID=GSCOCP00034492001;Dbxref=InterPro:IPR001471,PFAM:PF00847,SwissProt:Q1PFE1,SwissProt:Q38914,SwissProt:Q5YGP7,TAIR:AT1G51190.1,TAIR:AT1G72570.1,TAIR:AT4G37750.1,TrEMBL:A5AMI6,TrEMBL:B9GNL6,TrEMBL:F6H173;Derives_from=GSCOCT00034492001;Name=Cc10_g07680;Ontology_term=CC_evidence_code:ISS,GO:0003700,CC_EC_number:missing_EC_number,PRODUCT:Putative AP2-like ethylene-responsive transcription factor ANT,CC_functional_completeness:fragment,CC_gene:ANT,CC_gene:AIL1,CC_gene:PLT2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034492001~ Putative AP2-like ethylene-responsive transcription factor ANT~ ANT~ fragment;original_location=complement(join(2364872..2365241%2C2364166..2364787%2C2363809..2363896));owner=coffea | |
| 41378 chr10 manual_curation exon 6697306 6697393 . + . Parent=GSCOCT00034492001 | |
| 41379 chr10 manual_curation exon 6696415 6697036 . + . Parent=GSCOCT00034492001 | |
| 41380 chr10 manual_curation exon 6695226 6696330 . + . Parent=GSCOCT00034492001 | |
| 41381 chr10 manual_curation CDS 6697306 6697393 . + 2 Parent=GSCOCT00034492001 | |
| 41382 chr10 manual_curation CDS 6696415 6697036 . + 1 Parent=GSCOCT00034492001 | |
| 41383 chr10 manual_curation CDS 6695961 6696330 . + 0 Parent=GSCOCT00034492001 | |
| 41384 chr10 manual_curation gene 6697689 6699849 . + . ID=GSCOCG00034491001;Name=Cc10_g07690 | |
| 41385 chr10 manual_curation mRNA 6697689 6699849 . + . ID=GSCOCT00034491001;Parent=GSCOCG00034491001;Name=Cc10_g07690 | |
| 41386 chr10 manual_curation polypeptide 6697689 6699352 . + . ID=GSCOCP00034491001;Dbxref=GENE3D:G3DSA:3.30.730.10,InterPro:IPR001471,InterPro:IPR016177,PFAM:PF00847,PROFILE:PS51032,SMART:SM00380,SUPERFAMILY:SSF54171,SwissProt:Q1PFE1,SwissProt:Q5YGP7,TAIR:AT1G51190.1,TAIR:AT1G72570.1,TrEMBL:B9H6Q2,TrEMBL:F6H173,TrEMBL:Q6SA75;Derives_from=GSCOCT00034491001;Name=Cc10_g07690;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:ANT,CC_gene:PLT2,CC_gene:AIL1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034491001~ Putative uncharacterized protein~ ANT~ fragment;original_location=complement(join(2363436..2363513%2C2363280..2363353%2C2363109..2363159%2C2362923..2362999%2C2361850..2362514));owner=coffea | |
| 41387 chr10 manual_curation exon 6698688 6699849 . + . Parent=GSCOCT00034491001 | |
| 41388 chr10 manual_curation exon 6698203 6698279 . + . Parent=GSCOCT00034491001 | |
| 41389 chr10 manual_curation exon 6698043 6698093 . + . Parent=GSCOCT00034491001 | |
| 41390 chr10 manual_curation exon 6697849 6697922 . + . Parent=GSCOCT00034491001 | |
| 41391 chr10 manual_curation exon 6697689 6697766 . + . Parent=GSCOCT00034491001 | |
| 41392 chr10 manual_curation CDS 6698688 6699352 . + 1 Parent=GSCOCT00034491001 | |
| 41393 chr10 manual_curation CDS 6698203 6698279 . + 2 Parent=GSCOCT00034491001 | |
| 41394 chr10 manual_curation CDS 6698043 6698093 . + 2 Parent=GSCOCT00034491001 | |
| 41395 chr10 manual_curation CDS 6697849 6697922 . + 0 Parent=GSCOCT00034491001 | |
| 41396 chr10 manual_curation CDS 6697689 6697766 . + 0 Parent=GSCOCT00034491001 | |
| 41397 chr10 manual_curation gene 6713743 6714679 . + . ID=GSCOCG00034489001;Name=Cc10_g07700 | |
| 41398 chr10 manual_curation mRNA 6713743 6714679 . + . ID=GSCOCT00034489001;Parent=GSCOCG00034489001;Name=Cc10_g07700 | |
| 41399 chr10 manual_curation polypeptide 6713743 6714679 . + . ID=GSCOCP00034489001;Dbxref=SwissProt:Q6NKN9,SwissProt:Q9C670,SwissProt:Q9CAA9,TAIR:AT1G10120.1,TAIR:AT1G26260.1,TAIR:AT1G68920.1,TrEMBL:A5AMI8,TrEMBL:B9R6V4,TrEMBL:E0CNY1;Derives_from=GSCOCT00034489001;Name=Cc10_g07700;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Transcription factor bHLH74,CC_functional_completeness:fragment,CC_gene:BHLH74,CC_gene:BHLH49,CC_gene:BHLH76;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034489001~ Putative Transcription factor bHLH74~ BHLH74~ fragment;original_location=complement(join(2347343..2347459%2C2346863..2347303%2C2346523..2346777));owner=coffea | |
| 41400 chr10 manual_curation exon 6714425 6714679 . + . Parent=GSCOCT00034489001 | |
| 41401 chr10 manual_curation exon 6713899 6714339 . + . Parent=GSCOCT00034489001 | |
| 41402 chr10 manual_curation exon 6713743 6713859 . + . Parent=GSCOCT00034489001 | |
| 41403 chr10 manual_curation CDS 6714425 6714679 . + 0 Parent=GSCOCT00034489001 | |
| 41404 chr10 manual_curation CDS 6713899 6714339 . + 0 Parent=GSCOCT00034489001 | |
| 41405 chr10 manual_curation CDS 6713743 6713859 . + 0 Parent=GSCOCT00034489001 | |
| 41406 chr10 manual_curation gene 6714753 6716846 . + . ID=GSCOCG00034488001;Name=Cc10_g07710 | |
| 41407 chr10 manual_curation mRNA 6714753 6716846 . + . ID=GSCOCT00034488001;Parent=GSCOCG00034488001;Name=Cc10_g07710 | |
| 41408 chr10 manual_curation polypeptide 6714782 6716391 . + . ID=GSCOCP00034488001;Dbxref=InterPro:IPR011598,SUPERFAMILY:SSF47459,SwissProt:Q6NKN9,SwissProt:Q9CAA9,SwissProt:Q9LK48,TAIR:AT1G10120.1,TAIR:AT1G68920.1,TAIR:AT3G23690.1,TrEMBL:A3FM28,TrEMBL:B9GNL5,TrEMBL:E0CNY1;Derives_from=GSCOCT00034488001;Name=Cc10_g07710;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0030528,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Transcription factor bHLH74,CC_functional_completeness:fragment,CC_gene:BHLH74,CC_gene:BHLH49,CC_gene:BHLH77;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034488001~ Transcription factor bHLH74~ BHLH74~ fragment;original_location=complement(join(2346382..2346420%2C2346226..2346294%2C2345359..2345430%2C2345136..2345276%2C2344962..2345043%2C2344811..2344836));owner=coffea | |
| 41409 chr10 manual_curation exon 6716366 6716846 . + . Parent=GSCOCT00034488001 | |
| 41410 chr10 manual_curation exon 6716159 6716240 . + . Parent=GSCOCT00034488001 | |
| 41411 chr10 manual_curation exon 6715926 6716066 . + . Parent=GSCOCT00034488001 | |
| 41412 chr10 manual_curation exon 6715772 6715843 . + . Parent=GSCOCT00034488001 | |
| 41413 chr10 manual_curation exon 6714908 6714976 . + . Parent=GSCOCT00034488001 | |
| 41414 chr10 manual_curation exon 6714753 6714820 . + . Parent=GSCOCT00034488001 | |
| 41415 chr10 manual_curation CDS 6716366 6716391 . + 1 Parent=GSCOCT00034488001 | |
| 41416 chr10 manual_curation CDS 6716159 6716240 . + 0 Parent=GSCOCT00034488001 | |
| 41417 chr10 manual_curation CDS 6715926 6716066 . + 0 Parent=GSCOCT00034488001 | |
| 41418 chr10 manual_curation CDS 6715772 6715843 . + 0 Parent=GSCOCT00034488001 | |
| 41419 chr10 manual_curation CDS 6714908 6714976 . + 0 Parent=GSCOCT00034488001 | |
| 41420 chr10 manual_curation CDS 6714782 6714820 . + 0 Parent=GSCOCT00034488001 | |
| 41421 chr10 manual_curation gene 6730649 6734505 . - . ID=GSCOCG00034486001;Name=Cc10_g07720 | |
| 41422 chr10 manual_curation mRNA 6730649 6734505 . - . ID=GSCOCT00034486001;Parent=GSCOCG00034486001;Name=Cc10_g07720 | |
| 41423 chr10 manual_curation polypeptide 6731358 6734071 . - . ID=GSCOCP00034486001;Dbxref=InterPro:IPR001173,PFAM:PF00535,SwissProt:A2YHR9,SwissProt:Q84Z01,SwissProt:Q9ZQB9,TAIR:AT2G24630.1,TAIR:AT4G07960.1,TAIR:AT4G31590.1,TrEMBL:B9GNL0,TrEMBL:B9H6N7,TrEMBL:F6H171;Derives_from=GSCOCT00034486001;Name=Cc10_g07720;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.4.1.12,PRODUCT:Probable xyloglucan glycosyltransferase 12,CC_functional_completeness:complete,CC_gene:CSLC12,CC_gene:CSLC10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034486001~ Probable xyloglucan glycosyltransferase 12~ CSLC12~ complete;original_location=join(2327131..2327916%2C2328048..2328356%2C2328586..2328876%2C2328970..2329083%2C2329218..2329844);owner=coffea | |
| 41424 chr10 manual_curation exon 6733286 6734505 . - . Parent=GSCOCT00034486001 | |
| 41425 chr10 manual_curation exon 6732846 6733154 . - . Parent=GSCOCT00034486001 | |
| 41426 chr10 manual_curation exon 6732326 6732616 . - . Parent=GSCOCT00034486001 | |
| 41427 chr10 manual_curation exon 6732119 6732232 . - . Parent=GSCOCT00034486001 | |
| 41428 chr10 manual_curation exon 6730649 6731984 . - . Parent=GSCOCT00034486001 | |
| 41429 chr10 manual_curation CDS 6733286 6734071 . - 0 Parent=GSCOCT00034486001 | |
| 41430 chr10 manual_curation CDS 6732846 6733154 . - 0 Parent=GSCOCT00034486001 | |
| 41431 chr10 manual_curation CDS 6732326 6732616 . - 0 Parent=GSCOCT00034486001 | |
| 41432 chr10 manual_curation CDS 6732119 6732232 . - 0 Parent=GSCOCT00034486001 | |
| 41433 chr10 manual_curation CDS 6731358 6731984 . - 0 Parent=GSCOCT00034486001 | |
| 41434 chr10 manual_curation gene 6757395 6762362 . - . ID=GSCOCG00034485001;Name=Cc10_g07730 | |
| 41435 chr10 manual_curation mRNA 6757395 6762362 . - . ID=GSCOCT00034485001;Parent=GSCOCG00034485001;Name=Cc10_g07730 | |
| 41436 chr10 manual_curation polypeptide 6757981 6762027 . - . ID=GSCOCP00034485001;Dbxref=InterPro:IPR013057,PFAM:PF01490,SwissProt:P40074,SwissProt:Q28HE5,SwissProt:Q9JM15,TAIR:AT3G30390.1,TAIR:AT3G56200.1,TAIR:AT5G38820.1,TrEMBL:B9GNL1,TrEMBL:B9R6U8,TrEMBL:F6H170;Derives_from=GSCOCT00034485001;Name=Cc10_g07730;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Sodium-coupled neutral amino acid transporter 1,CC_functional_completeness:fragment,CC_gene:Slc38a1,CC_gene:AVT6,CC_gene:slc38a6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034485001~ Putative Sodium-coupled neutral amino acid transporter 1~ Slc38a1~ fragment;original_location=join(2299175..2299415%2C2299851..2300003%2C2300788..2300991%2C2302036..2302501%2C2303083..2303221);owner=coffea | |
| 41437 chr10 manual_curation exon 6761787 6762362 . - . Parent=GSCOCT00034485001 | |
| 41438 chr10 manual_curation exon 6761199 6761351 . - . Parent=GSCOCT00034485001 | |
| 41439 chr10 manual_curation exon 6760211 6760414 . - . Parent=GSCOCT00034485001 | |
| 41440 chr10 manual_curation exon 6758701 6759166 . - . Parent=GSCOCT00034485001 | |
| 41441 chr10 manual_curation exon 6757395 6758119 . - . Parent=GSCOCT00034485001 | |
| 41442 chr10 manual_curation CDS 6761787 6762027 . - 0 Parent=GSCOCT00034485001 | |
| 41443 chr10 manual_curation CDS 6761199 6761351 . - 1 Parent=GSCOCT00034485001 | |
| 41444 chr10 manual_curation CDS 6760211 6760414 . - 1 Parent=GSCOCT00034485001 | |
| 41445 chr10 manual_curation CDS 6758701 6759166 . - 1 Parent=GSCOCT00034485001 | |
| 41446 chr10 manual_curation CDS 6757981 6758119 . - 2 Parent=GSCOCT00034485001 | |
| 41447 chr10 manual_curation gene 6762541 6764874 . - . ID=GSCOCG00034484001;Name=Cc10_g07740 | |
| 41448 chr10 manual_curation mRNA 6762541 6764874 . - . ID=GSCOCT00034484001;Parent=GSCOCG00034484001;Name=Cc10_g07740 | |
| 41449 chr10 manual_curation polypeptide 6763052 6764874 . - . ID=GSCOCP00034484001;Dbxref=TAIR:AT3G12210.2,TrEMBL:B9GNL2,TrEMBL:F6H169,TrEMBL:I1M8X1;Derives_from=GSCOCT00034484001;Name=Cc10_g07740;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:DNA binding,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034484001~ DNA binding~ unknown_gene~ complete;original_location=join(2296328..2296741%2C2296867..2296953%2C2298001..2298150);owner=coffea | |
| 41450 chr10 manual_curation exon 6764461 6764874 . - . Parent=GSCOCT00034484001 | |
| 41451 chr10 manual_curation exon 6764249 6764335 . - . Parent=GSCOCT00034484001 | |
| 41452 chr10 manual_curation exon 6762541 6763201 . - . Parent=GSCOCT00034484001 | |
| 41453 chr10 manual_curation CDS 6764461 6764874 . - 0 Parent=GSCOCT00034484001 | |
| 41454 chr10 manual_curation CDS 6764249 6764335 . - 0 Parent=GSCOCT00034484001 | |
| 41455 chr10 manual_curation CDS 6763052 6763201 . - 0 Parent=GSCOCT00034484001 | |
| 41456 chr10 manual_curation gene 6776765 6780704 . + . ID=GSCOCG00034483001;Name=Cc10_g07750 | |
| 41457 chr10 manual_curation mRNA 6776765 6780704 . + . ID=GSCOCT00034483001;Parent=GSCOCG00034483001;Name=Cc10_g07750 | |
| 41458 chr10 manual_curation polypeptide 6776946 6780384 . + . ID=GSCOCP00034483001;Dbxref=InterPro:IPR003042,InterPro:IPR013698,PFAM:PF08491,PRINTS:PR00420,SwissProt:O48651,SwissProt:O65404,SwissProt:O65726,TAIR:AT1G58440.1,TAIR:AT2G22830.1,TAIR:AT4G37760.1,TrEMBL:D3YM76,TrEMBL:I1J3Z3,TrEMBL:Q506K3;Derives_from=GSCOCT00034483001;Name=Cc10_g07750;Ontology_term=CC_evidence_code:ISS,GO:0004506,GO:0008152,GO:0016021,GO:0016491,GO:0050660,GO:0055114,CC_EC_number:1.14.99.7,CC_EC_number:1.14.99.7,PRODUCT:Squalene monooxygenase,CC_functional_completeness:complete,CC_gene:SQP1%2C1,CC_gene:SQP1%2C2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034483001~ Squalene monooxygenase~ SQP1%2C1~ complete;original_location=complement(join(2283993..2284256%2C2283107..2283218%2C2282763..2282937%2C2282316..2282484%2C2281946..2282164%2C2281519..2281794%2C2281035..2281313%2C2280818..2280922));owner=coffea | |
| 41459 chr10 manual_curation exon 6780280 6780704 . + . Parent=GSCOCT00034483001 | |
| 41460 chr10 manual_curation exon 6779889 6780167 . + . Parent=GSCOCT00034483001 | |
| 41461 chr10 manual_curation exon 6779408 6779683 . + . Parent=GSCOCT00034483001 | |
| 41462 chr10 manual_curation exon 6779038 6779256 . + . Parent=GSCOCT00034483001 | |
| 41463 chr10 manual_curation exon 6778718 6778886 . + . Parent=GSCOCT00034483001 | |
| 41464 chr10 manual_curation exon 6778265 6778439 . + . Parent=GSCOCT00034483001 | |
| 41465 chr10 manual_curation exon 6777984 6778095 . + . Parent=GSCOCT00034483001 | |
| 41466 chr10 manual_curation exon 6776765 6777209 . + . Parent=GSCOCT00034483001 | |
| 41467 chr10 manual_curation CDS 6780280 6780384 . + 0 Parent=GSCOCT00034483001 | |
| 41468 chr10 manual_curation CDS 6779889 6780167 . + 0 Parent=GSCOCT00034483001 | |
| 41469 chr10 manual_curation CDS 6779408 6779683 . + 0 Parent=GSCOCT00034483001 | |
| 41470 chr10 manual_curation CDS 6779038 6779256 . + 0 Parent=GSCOCT00034483001 | |
| 41471 chr10 manual_curation CDS 6778718 6778886 . + 2 Parent=GSCOCT00034483001 | |
| 41472 chr10 manual_curation CDS 6778265 6778439 . + 1 Parent=GSCOCT00034483001 | |
| 41473 chr10 manual_curation CDS 6777984 6778095 . + 0 Parent=GSCOCT00034483001 | |
| 41474 chr10 manual_curation CDS 6776946 6777209 . + 0 Parent=GSCOCT00034483001 | |
| 41475 chr10 manual_curation gene 6782326 6788603 . - . ID=GSCOCG00034482001;Name=Cc10_g07760 | |
| 41476 chr10 manual_curation mRNA 6782326 6788603 . - . ID=GSCOCT00034482001;Parent=GSCOCG00034482001;Name=Cc10_g07760 | |
| 41477 chr10 manual_curation polypeptide 6782775 6788433 . - . ID=GSCOCP00034482001;Dbxref=GENE3D:G3DSA:1.10.287.110,InterPro:IPR001623,InterPro:IPR015609,PANTHER:PTHR11821,PFAM:PF00226,PROFILE:PS50076,SMART:SM00271,SUPERFAMILY:SSF46565,TAIR:AT4G07990.1,TrEMBL:B9H6N4,TrEMBL:B9R6V3,TrEMBL:D7M7M9;Derives_from=GSCOCT00034482001;Name=Cc10_g07760;Ontology_term=CC_evidence_code:ISS,GO:0031072,CC_EC_number:missing_EC_number,PRODUCT:Chaperone DnaJ-domain superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034482001~ Chaperone DnaJ-domain superfamily protein~ unknown_gene~ complete;original_location=join(2272769..2272933%2C2273698..2273739%2C2274947..2275075%2C2276828..2277063%2C2277297..2277333%2C2278175..2278232%2C2278348..2278427);owner=coffea | |
| 41478 chr10 manual_curation exon 6788269 6788603 . - . Parent=GSCOCT00034482001 | |
| 41479 chr10 manual_curation exon 6787463 6787504 . - . Parent=GSCOCT00034482001 | |
| 41480 chr10 manual_curation exon 6786127 6786255 . - . Parent=GSCOCT00034482001 | |
| 41481 chr10 manual_curation exon 6784139 6784374 . - . Parent=GSCOCT00034482001 | |
| 41482 chr10 manual_curation exon 6783869 6783905 . - . Parent=GSCOCT00034482001 | |
| 41483 chr10 manual_curation exon 6782970 6783027 . - . Parent=GSCOCT00034482001 | |
| 41484 chr10 manual_curation exon 6782326 6782854 . - . Parent=GSCOCT00034482001 | |
| 41485 chr10 manual_curation CDS 6788269 6788433 . - 0 Parent=GSCOCT00034482001 | |
| 41486 chr10 manual_curation CDS 6787463 6787504 . - 0 Parent=GSCOCT00034482001 | |
| 41487 chr10 manual_curation CDS 6786127 6786255 . - 0 Parent=GSCOCT00034482001 | |
| 41488 chr10 manual_curation CDS 6784139 6784374 . - 0 Parent=GSCOCT00034482001 | |
| 41489 chr10 manual_curation CDS 6783869 6783905 . - 2 Parent=GSCOCT00034482001 | |
| 41490 chr10 manual_curation CDS 6782970 6783027 . - 0 Parent=GSCOCT00034482001 | |
| 41491 chr10 manual_curation CDS 6782775 6782854 . - 1 Parent=GSCOCT00034482001 | |
| 41492 chr10 manual_curation gene 6792731 6797929 . + . ID=GSCOCG00034481001;Name=Cc10_g07770 | |
| 41493 chr10 manual_curation mRNA 6792731 6797929 . + . ID=GSCOCT00034481001;Parent=GSCOCG00034481001;Name=Cc10_g07770 | |
| 41494 chr10 manual_curation polypeptide 6793115 6797399 . + . ID=GSCOCP00034481001;Dbxref=SwissProt:Q9M2Y6,TAIR:AT3G49720.1,TAIR:AT5G65810.1,TrEMBL:A9PBS0,TrEMBL:B9S7U0,TrEMBL:E0CNX5;Derives_from=GSCOCT00034481001;Name=Cc10_g07770;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterized protein At3g49720,CC_functional_completeness:complete,CC_gene:At3g49720;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034481001~ Uncharacterized protein At3g49720~ At3g49720~ complete;original_location=complement(join(2267962..2268087%2C2267836..2267875%2C2266737..2266775%2C2265651..2266025%2C2264955..2265010%2C2263803..2263955));owner=coffea | |
| 41495 chr10 manual_curation exon 6792920 6792968 . + . Parent=GSCOCT00034481001 | |
| 41496 chr10 manual_curation exon 6792731 6792824 . + . Parent=GSCOCT00034481001 | |
| 41497 chr10 manual_curation exon 6797247 6797929 . + . Parent=GSCOCT00034481001 | |
| 41498 chr10 manual_curation exon 6796192 6796247 . + . Parent=GSCOCT00034481001 | |
| 41499 chr10 manual_curation exon 6795177 6795551 . + . Parent=GSCOCT00034481001 | |
| 41500 chr10 manual_curation exon 6794427 6794465 . + . Parent=GSCOCT00034481001 | |
| 41501 chr10 manual_curation exon 6793327 6793366 . + . Parent=GSCOCT00034481001 | |
| 41502 chr10 manual_curation exon 6793083 6793240 . + . Parent=GSCOCT00034481001 | |
| 41503 chr10 manual_curation CDS 6797247 6797399 . + 0 Parent=GSCOCT00034481001 | |
| 41504 chr10 manual_curation CDS 6796192 6796247 . + 1 Parent=GSCOCT00034481001 | |
| 41505 chr10 manual_curation CDS 6795177 6795551 . + 1 Parent=GSCOCT00034481001 | |
| 41506 chr10 manual_curation CDS 6794427 6794465 . + 1 Parent=GSCOCT00034481001 | |
| 41507 chr10 manual_curation CDS 6793327 6793366 . + 0 Parent=GSCOCT00034481001 | |
| 41508 chr10 manual_curation CDS 6793115 6793240 . + 0 Parent=GSCOCT00034481001 | |
| 41509 chr10 manual_curation gene 6804138 6806113 . + . ID=GSCOCG00034480001;Name=Cc10_g07780 | |
| 41510 chr10 manual_curation mRNA 6804138 6806113 . + . ID=GSCOCT00034480001;Parent=GSCOCG00034480001;Name=Cc10_g07780 | |
| 41511 chr10 manual_curation polypeptide 6804138 6806113 . + . ID=GSCOCP00034480001;Dbxref=GENE3D:G3DSA:3.40.640.10,GENE3D:G3DSA:3.90.1150.10,InterPro:IPR001176,InterPro:IPR004838,InterPro:IPR004839,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,PFAM:PF00155,PRINTS:PR00753,PROSITE:PS00105,SUPERFAMILY:SSF53383,SwissProt:Q00257,SwissProt:Q42881,SwissProt:Q9T065,TAIR:AT2G22810.1,TAIR:AT3G49700.1,TAIR:AT4G37770.1,TrEMBL:B9GNK7,TrEMBL:F6H8C7,TrEMBL:Q4LDM2;Derives_from=GSCOCT00034480001;Name=Cc10_g07780;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0009058,GO:0016847,GO:0030170,CC_EC_number:4.4.1.14,PRODUCT:1-aminocyclopropane-1-carboxylate synthase CMA101,CC_functional_completeness:complete,CC_gene:ACS2,CC_gene:ACS3,CC_gene:ACS8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034480001~ 1-aminocyclopropane-1-carboxylate synthase CMA101~ ACS2~ complete;original_location=complement(join(2256924..2257064%2C2256384..2256515%2C2256118..2256278%2C2255089..2256013));owner=coffea | |
| 41512 chr10 manual_curation exon 6805189 6806113 . + . Parent=GSCOCT00034480001 | |
| 41513 chr10 manual_curation exon 6804924 6805084 . + . Parent=GSCOCT00034480001 | |
| 41514 chr10 manual_curation exon 6804687 6804818 . + . Parent=GSCOCT00034480001 | |
| 41515 chr10 manual_curation exon 6804138 6804278 . + . Parent=GSCOCT00034480001 | |
| 41516 chr10 manual_curation CDS 6805189 6806113 . + 2 Parent=GSCOCT00034480001 | |
| 41517 chr10 manual_curation CDS 6804924 6805084 . + 0 Parent=GSCOCT00034480001 | |
| 41518 chr10 manual_curation CDS 6804687 6804818 . + 0 Parent=GSCOCT00034480001 | |
| 41519 chr10 manual_curation CDS 6804138 6804278 . + 0 Parent=GSCOCT00034480001 | |
| 41520 chr10 manual_curation gene 6812769 6822910 . + . ID=GSCOCG00034479001;Name=Cc10_g07790 | |
| 41521 chr10 manual_curation mRNA 6812769 6822910 . + . ID=GSCOCT00034479001;Parent=GSCOCG00034479001;Name=Cc10_g07790 | |
| 41522 chr10 manual_curation polypeptide 6813627 6822721 . + . ID=GSCOCP00034479001;Dbxref=InterPro:IPR003864,PFAM:PF02714,SwissProt:Q03516,SwissProt:Q06538,SwissProt:Q09809,TAIR:AT1G10090.1,TAIR:AT1G58520.2,TAIR:AT3G01100.1,TrEMBL:B9R6U4,TrEMBL:I1J3Z8,TrEMBL:I1J3Z9;Derives_from=GSCOCT00034479001;Name=Cc10_g07790;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Early-responsive to dehydration stress protein (ERD4),CC_functional_completeness:complete,CC_gene:SPAC2G11.09,CC_gene:YLR241W,CC_gene:RSN1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034479001~ Early-responsive to dehydration stress protein (ERD4)~ SPAC2G11.09~ complete;original_location=complement(join(2247295..2247575%2C2244830..2244976%2C2243859..2243922%2C2243536..2243745%2C2242564..2242743%2C2241268..2241566%2C2240589..2240880%2C2239912..2240190%2C2238906..2239139%2C2238641..2238821%2C2238481..2238551));owner=coffea | |
| 41523 chr10 manual_curation exon 6812769 6812910 . + . Parent=GSCOCT00034479001 | |
| 41524 chr10 manual_curation exon 6822651 6822910 . + . Parent=GSCOCT00034479001 | |
| 41525 chr10 manual_curation exon 6822381 6822561 . + . Parent=GSCOCT00034479001 | |
| 41526 chr10 manual_curation exon 6822063 6822296 . + . Parent=GSCOCT00034479001 | |
| 41527 chr10 manual_curation exon 6821012 6821290 . + . Parent=GSCOCT00034479001 | |
| 41528 chr10 manual_curation exon 6820322 6820613 . + . Parent=GSCOCT00034479001 | |
| 41529 chr10 manual_curation exon 6819636 6819934 . + . Parent=GSCOCT00034479001 | |
| 41530 chr10 manual_curation exon 6818459 6818638 . + . Parent=GSCOCT00034479001 | |
| 41531 chr10 manual_curation exon 6817457 6817666 . + . Parent=GSCOCT00034479001 | |
| 41532 chr10 manual_curation exon 6817280 6817343 . + . Parent=GSCOCT00034479001 | |
| 41533 chr10 manual_curation exon 6816226 6816372 . + . Parent=GSCOCT00034479001 | |
| 41534 chr10 manual_curation exon 6813477 6813907 . + . Parent=GSCOCT00034479001 | |
| 41535 chr10 manual_curation CDS 6822651 6822721 . + 1 Parent=GSCOCT00034479001 | |
| 41536 chr10 manual_curation CDS 6822381 6822561 . + 0 Parent=GSCOCT00034479001 | |
| 41537 chr10 manual_curation CDS 6822063 6822296 . + 0 Parent=GSCOCT00034479001 | |
| 41538 chr10 manual_curation CDS 6821012 6821290 . + 0 Parent=GSCOCT00034479001 | |
| 41539 chr10 manual_curation CDS 6820322 6820613 . + 2 Parent=GSCOCT00034479001 | |
| 41540 chr10 manual_curation CDS 6819636 6819934 . + 0 Parent=GSCOCT00034479001 | |
| 41541 chr10 manual_curation CDS 6818459 6818638 . + 0 Parent=GSCOCT00034479001 | |
| 41542 chr10 manual_curation CDS 6817457 6817666 . + 0 Parent=GSCOCT00034479001 | |
| 41543 chr10 manual_curation CDS 6817280 6817343 . + 2 Parent=GSCOCT00034479001 | |
| 41544 chr10 manual_curation CDS 6816226 6816372 . + 2 Parent=GSCOCT00034479001 | |
| 41545 chr10 manual_curation CDS 6813627 6813907 . + 0 Parent=GSCOCT00034479001 | |
| 41546 chr10 manual_curation gene 6823054 6825570 . - . ID=GSCOCG00034478001;Name=Cc10_g07800 | |
| 41547 chr10 manual_curation mRNA 6823054 6825570 . - . ID=GSCOCT00034478001;Parent=GSCOCG00034478001;Name=Cc10_g07800 | |
| 41548 chr10 manual_curation polypeptide 6823290 6825514 . - . ID=GSCOCP00034478001;Dbxref=TrEMBL:E0CNX1,TrEMBL:I1J400,TrEMBL:I1J401;Derives_from=GSCOCT00034478001;Name=Cc10_g07800;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034478001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=join(2235688..2235729%2C2237171..2237593%2C2237676..2237912);owner=coffea | |
| 41549 chr10 manual_curation exon 6825473 6825570 . - . Parent=GSCOCT00034478001 | |
| 41550 chr10 manual_curation exon 6823609 6824031 . - . Parent=GSCOCT00034478001 | |
| 41551 chr10 manual_curation exon 6823054 6823526 . - . Parent=GSCOCT00034478001 | |
| 41552 chr10 manual_curation CDS 6825473 6825514 . - 0 Parent=GSCOCT00034478001 | |
| 41553 chr10 manual_curation CDS 6823609 6824031 . - 0 Parent=GSCOCT00034478001 | |
| 41554 chr10 manual_curation CDS 6823290 6823526 . - 0 Parent=GSCOCT00034478001 | |
| 41555 chr10 manual_curation gene 6831075 6832673 . - . ID=GSCOCG00034477001;Name=Cc10_g07810 | |
| 41556 chr10 manual_curation mRNA 6831075 6832673 . - . ID=GSCOCT00034477001;Parent=GSCOCG00034477001;Name=Cc10_g07810 | |
| 41557 chr10 manual_curation polypeptide 6831075 6832442 . - . ID=GSCOCP00034477001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001005,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR014778,InterPro:IPR015495,InterPro:IPR017930,PANTHER:PTHR10641,PFAM:PF00249,PROFILE:PS51294,SMART:SM00717,SUPERFAMILY:SSF46689,SwissProt:Q9FG68,SwissProt:Q9M2Y9,SwissProt:Q9SJL7,TAIR:AT2G36890.1,TAIR:AT3G49690.1,TAIR:AT4G37780.1,TAIR:AT5G65790.1,TrEMBL:A5AK56,TrEMBL:D7UEC5,TrEMBL:E0CNX0;Derives_from=GSCOCT00034477001;Name=Cc10_g07810;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:RAX3,CC_gene:RAX2,CC_gene:RAX1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034477001~ Putative uncharacterized protein~ RAX3~ complete;original_location=join(2228760..2228895%2C2229041..2229170%2C2229335..2230127);owner=coffea | |
| 41558 chr10 manual_curation exon 6832307 6832673 . - . Parent=GSCOCT00034477001 | |
| 41559 chr10 manual_curation exon 6832032 6832161 . - . Parent=GSCOCT00034477001 | |
| 41560 chr10 manual_curation exon 6831075 6831867 . - . Parent=GSCOCT00034477001 | |
| 41561 chr10 manual_curation CDS 6832307 6832442 . - 0 Parent=GSCOCT00034477001 | |
| 41562 chr10 manual_curation CDS 6832032 6832161 . - 1 Parent=GSCOCT00034477001 | |
| 41563 chr10 manual_curation CDS 6831075 6831867 . - 2 Parent=GSCOCT00034477001 | |
| 41564 chr10 manual_curation gene 6838552 6843914 . - . ID=GSCOCG00034476001;Name=Cc10_g07820 | |
| 41565 chr10 manual_curation mRNA 6838552 6843914 . - . ID=GSCOCT00034476001;Parent=GSCOCG00034476001;Name=Cc10_g07820 | |
| 41566 chr10 manual_curation polypeptide 6838867 6843614 . - . ID=GSCOCP00034476001;Dbxref=InterPro:IPR001544,InterPro:IPR005786,InterPro:IPR018300,PANTHER:PTHR11825,PANTHER:PTHR11825:SF2,PFAM:PF01063,PIR:PIRSF006468,PROSITE:PS00770,SUPERFAMILY:SSF56752,SwissProt:Q93Y32,SwissProt:Q9FYA6,SwissProt:Q9M439,TAIR:AT1G10060.2,TAIR:AT1G10070.1,TAIR:AT3G49680.1,TIGRFAMs:TIGR01123,TrEMBL:B9R6U0,TrEMBL:E0CNW8,TrEMBL:Q94CF8;Derives_from=GSCOCT00034476001;Name=Cc10_g07820;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004084,GO:0008152,GO:0009081,CC_EC_number:2.6.1.42,PRODUCT:Branched-chain-amino-acid aminotransferase 2%2C chloroplastic,CC_functional_completeness:complete,CC_gene:BCAT2,CC_gene:BCAT1,CC_gene:BCAT5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034476001~ Branched-chain-amino-acid aminotransferase 2%2C chloroplastic~ BCAT2~ complete;original_location=join(2217588..2217656%2C2218876..2218949%2C2219922..2220093%2C2220182..2220358%2C2220479..2220610%2C2220743..2220841%2C2221206..2221322%2C2221593..2221688%2C2221868..2221980%2C2222221..2222335);owner=coffea | |
| 41567 chr10 manual_curation exon 6843546 6843914 . - . Parent=GSCOCT00034476001 | |
| 41568 chr10 manual_curation exon 6842253 6842326 . - . Parent=GSCOCT00034476001 | |
| 41569 chr10 manual_curation exon 6841109 6841280 . - . Parent=GSCOCT00034476001 | |
| 41570 chr10 manual_curation exon 6840844 6841020 . - . Parent=GSCOCT00034476001 | |
| 41571 chr10 manual_curation exon 6840592 6840723 . - . Parent=GSCOCT00034476001 | |
| 41572 chr10 manual_curation exon 6840361 6840459 . - . Parent=GSCOCT00034476001 | |
| 41573 chr10 manual_curation exon 6839880 6839996 . - . Parent=GSCOCT00034476001 | |
| 41574 chr10 manual_curation exon 6839514 6839609 . - . Parent=GSCOCT00034476001 | |
| 41575 chr10 manual_curation exon 6839222 6839334 . - . Parent=GSCOCT00034476001 | |
| 41576 chr10 manual_curation exon 6838552 6838981 . - . Parent=GSCOCT00034476001 | |
| 41577 chr10 manual_curation CDS 6843546 6843614 . - 0 Parent=GSCOCT00034476001 | |
| 41578 chr10 manual_curation CDS 6842253 6842326 . - 0 Parent=GSCOCT00034476001 | |
| 41579 chr10 manual_curation CDS 6841109 6841280 . - 2 Parent=GSCOCT00034476001 | |
| 41580 chr10 manual_curation CDS 6840844 6841020 . - 0 Parent=GSCOCT00034476001 | |
| 41581 chr10 manual_curation CDS 6840592 6840723 . - 0 Parent=GSCOCT00034476001 | |
| 41582 chr10 manual_curation CDS 6840361 6840459 . - 0 Parent=GSCOCT00034476001 | |
| 41583 chr10 manual_curation CDS 6839880 6839996 . - 0 Parent=GSCOCT00034476001 | |
| 41584 chr10 manual_curation CDS 6839514 6839609 . - 0 Parent=GSCOCT00034476001 | |
| 41585 chr10 manual_curation CDS 6839222 6839334 . - 0 Parent=GSCOCT00034476001 | |
| 41586 chr10 manual_curation CDS 6838867 6838981 . - 2 Parent=GSCOCT00034476001 | |
| 41587 chr10 manual_curation gene 6848272 6848463 . - . ID=GSCOCG00034475001;Name=Cc10_g07830 | |
| 41588 chr10 manual_curation mRNA 6848272 6848463 . - . ID=GSCOCT00034475001;Parent=GSCOCG00034475001;Name=Cc10_g07830 | |
| 41589 chr10 manual_curation polypeptide 6848272 6848463 . - . ID=GSCOCP00034475001;Dbxref=TrEMBL:B9H6S0,TrEMBL:B9R6T8,TrEMBL:D7SRJ0;Derives_from=GSCOCT00034475001;Name=Cc10_g07830;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Branched-chain amino acid aminotransferase%2C putative,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034475001~ Branched-chain amino acid aminotransferase%2C putative~ unknown_gene~ fragment;original_location=2212739..2212930;owner=coffea | |
| 41590 chr10 manual_curation exon 6848272 6848463 . - . Parent=GSCOCT00034475001 | |
| 41591 chr10 manual_curation CDS 6848272 6848463 . - 0 Parent=GSCOCT00034475001 | |
| 41592 chr10 manual_curation gene 6856959 6858258 . + . ID=GSCOCG00034474001;Name=Cc10_g07840 | |
| 41593 chr10 manual_curation mRNA 6856959 6858258 . + . ID=GSCOCT00034474001;Parent=GSCOCG00034474001;Name=Cc10_g07840 | |
| 41594 chr10 manual_curation polypeptide 6857038 6858133 . + . ID=GSCOCP00034474001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001356,InterPro:IPR003106,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR017970,PFAM:PF00046,PFAM:PF02183,PROFILE:PS50071,PROSITE:PS00027,SMART:SM00340,SMART:SM00389,SUPERFAMILY:SSF46689,SwissProt:P46603,SwissProt:P46604,SwissProt:Q8GRL4,TAIR:AT2G22800.1,TAIR:AT4G37790.1,TAIR:AT5G06710.1,TrEMBL:A5B626,TrEMBL:B9HFT7,TrEMBL:D9ZJ03;Derives_from=GSCOCT00034474001;Name=Cc10_g07840;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,GO:0005634,GO:0030528,GO:0043565,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Homeobox-leucine zipper protein HAT22,CC_functional_completeness:complete,CC_gene:HAT22,CC_gene:HAT9,CC_gene:HOX19;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034474001~ Homeobox-leucine zipper protein HAT22~ HAT22~ complete;original_location=complement(join(2203712..2204164%2C2203518..2203597%2C2203069..2203366));owner=coffea | |
| 41595 chr10 manual_curation exon 6857836 6858258 . + . Parent=GSCOCT00034474001 | |
| 41596 chr10 manual_curation exon 6857605 6857684 . + . Parent=GSCOCT00034474001 | |
| 41597 chr10 manual_curation exon 6856959 6857490 . + . Parent=GSCOCT00034474001 | |
| 41598 chr10 manual_curation CDS 6857836 6858133 . + 2 Parent=GSCOCT00034474001 | |
| 41599 chr10 manual_curation CDS 6857605 6857684 . + 0 Parent=GSCOCT00034474001 | |
| 41600 chr10 manual_curation CDS 6857038 6857490 . + 0 Parent=GSCOCT00034474001 | |
| 41601 chr10 manual_curation gene 6864197 6871522 . - . ID=GSCOCG00034473001;Name=Cc10_g07850 | |
| 41602 chr10 manual_curation mRNA 6864197 6871522 . - . ID=GSCOCT00034473001;Parent=GSCOCG00034473001;Name=Cc10_g07850 | |
| 41603 chr10 manual_curation polypeptide 6864829 6870862 . - . ID=GSCOCP00034473001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001356,InterPro:IPR005539,InterPro:IPR005540,InterPro:IPR005541,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR017970,PFAM:PF00046,PFAM:PF03789,PFAM:PF03790,PFAM:PF03791,PROFILE:PS50071,PROFILE:PS51213,PROSITE:PS00027,SMART:SM00389,SUPERFAMILY:SSF46689,SwissProt:O04134,SwissProt:O04135,SwissProt:Q41330,TAIR:AT1G23380.2,TAIR:AT1G62360.1,TAIR:AT4G08150.1,TrEMBL:E2CZB7,TrEMBL:F6H159,TrEMBL:Q717U2;Derives_from=GSCOCT00034473001;Name=Cc10_g07850;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,GO:0005634,GO:0030528,GO:0043565,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Homeotic protein knotted-1,CC_functional_completeness:complete,CC_gene:KN1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034473001~ Homeotic protein knotted-1~ KN1~ complete;original_location=join(2190340..2190432%2C2190517..2190762%2C2190855..2190980%2C2191089..2191224%2C2195798..2196051%2C2196170..2196373);owner=coffea | |
| 41604 chr10 manual_curation exon 6870770 6871522 . - . Parent=GSCOCT00034473001 | |
| 41605 chr10 manual_curation exon 6870440 6870685 . - . Parent=GSCOCT00034473001 | |
| 41606 chr10 manual_curation exon 6870222 6870347 . - . Parent=GSCOCT00034473001 | |
| 41607 chr10 manual_curation exon 6869978 6870113 . - . Parent=GSCOCT00034473001 | |
| 41608 chr10 manual_curation exon 6865151 6865404 . - . Parent=GSCOCT00034473001 | |
| 41609 chr10 manual_curation exon 6864197 6865032 . - . Parent=GSCOCT00034473001 | |
| 41610 chr10 manual_curation CDS 6870770 6870862 . - 0 Parent=GSCOCT00034473001 | |
| 41611 chr10 manual_curation CDS 6870440 6870685 . - 0 Parent=GSCOCT00034473001 | |
| 41612 chr10 manual_curation CDS 6870222 6870347 . - 0 Parent=GSCOCT00034473001 | |
| 41613 chr10 manual_curation CDS 6869978 6870113 . - 0 Parent=GSCOCT00034473001 | |
| 41614 chr10 manual_curation CDS 6865151 6865404 . - 1 Parent=GSCOCT00034473001 | |
| 41615 chr10 manual_curation CDS 6864829 6865032 . - 0 Parent=GSCOCT00034473001 | |
| 41616 chr10 manual_curation gene 6887842 6893660 . - . ID=GSCOCG00034472001;Name=Cc10_g07860 | |
| 41617 chr10 manual_curation mRNA 6887842 6893660 . - . ID=GSCOCT00034472001;Parent=GSCOCG00034472001;Name=Cc10_g07860 | |
| 41618 chr10 manual_curation polypeptide 6888051 6893478 . - . ID=GSCOCP00034472001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR001000,InterPro:IPR003305,InterPro:IPR008979,InterPro:IPR013781,InterPro:IPR017853,PFAM:PF00331,PFAM:PF02018,PRINTS:PR00134,PROSITE:PS00591,SMART:SM00633,SUPERFAMILY:SSF49785,SUPERFAMILY:SSF51445,SwissProt:O69230,SwissProt:P36917,SwissProt:P38535,TAIR:AT1G10050.1,TAIR:AT1G58370.1,TAIR:AT4G08160.1,TrEMBL:B9GNK0,TrEMBL:F6H158,TrEMBL:Q3Y6U9;Derives_from=GSCOCT00034472001;Name=Cc10_g07860;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0043169,CC_EC_number:3.2.1.8,PRODUCT:glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein,CC_functional_completeness:complete,CC_gene:xynC,CC_gene:xynA,CC_gene:xynX;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034472001~ glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein~ xynC~ complete;original_location=join(2167724..2167792%2C2167872..2167934%2C2168951..2169303%2C2169365..2169557%2C2169749..2170101%2C2170753..2170930%2C2171099..2171635%2C2172036..2173151);owner=coffea | |
| 41619 chr10 manual_curation exon 6893410 6893660 . - . Parent=GSCOCT00034472001 | |
| 41620 chr10 manual_curation exon 6893268 6893330 . - . Parent=GSCOCT00034472001 | |
| 41621 chr10 manual_curation exon 6891899 6892251 . - . Parent=GSCOCT00034472001 | |
| 41622 chr10 manual_curation exon 6891645 6891837 . - . Parent=GSCOCT00034472001 | |
| 41623 chr10 manual_curation exon 6891101 6891453 . - . Parent=GSCOCT00034472001 | |
| 41624 chr10 manual_curation exon 6890272 6890449 . - . Parent=GSCOCT00034472001 | |
| 41625 chr10 manual_curation exon 6889567 6890103 . - . Parent=GSCOCT00034472001 | |
| 41626 chr10 manual_curation exon 6887842 6889166 . - . Parent=GSCOCT00034472001 | |
| 41627 chr10 manual_curation CDS 6893410 6893478 . - 0 Parent=GSCOCT00034472001 | |
| 41628 chr10 manual_curation CDS 6893268 6893330 . - 0 Parent=GSCOCT00034472001 | |
| 41629 chr10 manual_curation CDS 6891899 6892251 . - 0 Parent=GSCOCT00034472001 | |
| 41630 chr10 manual_curation CDS 6891645 6891837 . - 2 Parent=GSCOCT00034472001 | |
| 41631 chr10 manual_curation CDS 6891101 6891453 . - 0 Parent=GSCOCT00034472001 | |
| 41632 chr10 manual_curation CDS 6890272 6890449 . - 2 Parent=GSCOCT00034472001 | |
| 41633 chr10 manual_curation CDS 6889567 6890103 . - 0 Parent=GSCOCT00034472001 | |
| 41634 chr10 manual_curation CDS 6888051 6889166 . - 0 Parent=GSCOCT00034472001 | |
| 41635 chr10 manual_curation gene 6899518 6904630 . - . ID=GSCOCG00034471001;Name=Cc10_g07870 | |
| 41636 chr10 manual_curation mRNA 6899518 6904630 . - . ID=GSCOCT00034471001;Parent=GSCOCG00034471001;Name=Cc10_g07870 | |
| 41637 chr10 manual_curation polypeptide 6899518 6904630 . - . ID=GSCOCP00034471001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR001000,InterPro:IPR013781,InterPro:IPR017853,PFAM:PF00331,SUPERFAMILY:SSF51445,TAIR:AT1G10050.1,TAIR:AT1G58370.1,TAIR:AT4G08160.1,TrEMBL:F6H158,TrEMBL:I1K8B0,TrEMBL:I1MXF1;Derives_from=GSCOCT00034471001;Name=Cc10_g07870;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0043169,CC_EC_number:missing_EC_number,PRODUCT:Putative glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034471001~ Putative glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein~ unknown_gene~ fragment;original_location=join(2156572..2156685%2C2157087..2157230%2C2157306..2157425%2C2160933..2160975%2C2161506..2161684);owner=coffea | |
| 41638 chr10 manual_curation exon 6904517 6904630 . - . Parent=GSCOCT00034471001 | |
| 41639 chr10 manual_curation exon 6903972 6904115 . - . Parent=GSCOCT00034471001 | |
| 41640 chr10 manual_curation exon 6903777 6903896 . - . Parent=GSCOCT00034471001 | |
| 41641 chr10 manual_curation exon 6900227 6900269 . - . Parent=GSCOCT00034471001 | |
| 41642 chr10 manual_curation exon 6899518 6899696 . - . Parent=GSCOCT00034471001 | |
| 41643 chr10 manual_curation CDS 6904517 6904630 . - 0 Parent=GSCOCT00034471001 | |
| 41644 chr10 manual_curation CDS 6903972 6904115 . - 0 Parent=GSCOCT00034471001 | |
| 41645 chr10 manual_curation CDS 6903777 6903896 . - 0 Parent=GSCOCT00034471001 | |
| 41646 chr10 manual_curation CDS 6900227 6900269 . - 0 Parent=GSCOCT00034471001 | |
| 41647 chr10 manual_curation CDS 6899518 6899696 . - 1 Parent=GSCOCT00034471001 | |
| 41648 chr10 manual_curation gene 6904787 6908427 . - . ID=GSCOCG00034470001;Name=Cc10_g07880 | |
| 41649 chr10 manual_curation mRNA 6904787 6908427 . - . ID=GSCOCT00034470001;Parent=GSCOCG00034470001;Name=Cc10_g07880 | |
| 41650 chr10 manual_curation polypeptide 6904787 6908427 . - . ID=GSCOCP00034470001;Dbxref=InterPro:IPR003305,InterPro:IPR008979,PFAM:PF02018,SUPERFAMILY:SSF49785,TAIR:AT1G10050.1,TAIR:AT1G58370.1,TAIR:AT4G08160.1,TrEMBL:B9R6T2,TrEMBL:F6H158,TrEMBL:Q3Y6U9;Derives_from=GSCOCT00034470001;Name=Cc10_g07880;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034470001~ Putative glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein~ unknown_gene~ fragment;original_location=join(2152775..2152840%2C2152896..2153251%2C2153950..2153978%2C2155833..2155984%2C2156149..2156415);owner=coffea | |
| 41651 chr10 manual_curation exon 6908362 6908427 . - . Parent=GSCOCT00034470001 | |
| 41652 chr10 manual_curation exon 6907951 6908306 . - . Parent=GSCOCT00034470001 | |
| 41653 chr10 manual_curation exon 6907224 6907252 . - . Parent=GSCOCT00034470001 | |
| 41654 chr10 manual_curation exon 6905218 6905369 . - . Parent=GSCOCT00034470001 | |
| 41655 chr10 manual_curation exon 6904787 6905053 . - . Parent=GSCOCT00034470001 | |
| 41656 chr10 manual_curation CDS 6908362 6908427 . - 0 Parent=GSCOCT00034470001 | |
| 41657 chr10 manual_curation CDS 6907951 6908306 . - 0 Parent=GSCOCT00034470001 | |
| 41658 chr10 manual_curation CDS 6907224 6907252 . - 2 Parent=GSCOCT00034470001 | |
| 41659 chr10 manual_curation CDS 6905218 6905369 . - 1 Parent=GSCOCT00034470001 | |
| 41660 chr10 manual_curation CDS 6904787 6905053 . - 0 Parent=GSCOCT00034470001 | |
| 41661 chr10 manual_curation gene 6910946 6914787 . + . ID=GSCOCG00034469001;Name=Cc10_g07890 | |
| 41662 chr10 manual_curation mRNA 6910946 6914787 . + . ID=GSCOCT00034469001;Parent=GSCOCG00034469001;Name=Cc10_g07890 | |
| 41663 chr10 manual_curation polypeptide 6911948 6914302 . + . ID=GSCOCP00034469001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:B3H672,SwissProt:P0C7R4,SwissProt:Q9SA60,TAIR:AT1G03100.1,TAIR:AT1G69290.1,TAIR:AT4G17616.1,TIGRFAMs:TIGR00756,TrEMBL:B9H8B2,TrEMBL:B9SFI2,TrEMBL:F6HI58;Derives_from=GSCOCT00034469001;Name=Cc10_g07890;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At1g03100%2C mitochondrial,CC_functional_completeness:complete,CC_gene:At1g03100,CC_gene:At4g17616,CC_gene:At1g69290;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034469001~ Pentatricopeptide repeat-containing protein At1g03100%2C mitochondrial~ At1g03100~ complete;original_location=complement(2146900..2149254);owner=coffea | |
| 41664 chr10 manual_curation exon 6910946 6911395 . + . Parent=GSCOCT00034469001 | |
| 41665 chr10 manual_curation exon 6911776 6914787 . + . Parent=GSCOCT00034469001 | |
| 41666 chr10 manual_curation CDS 6911948 6914302 . + 0 Parent=GSCOCT00034469001 | |
| 41667 chr10 manual_curation gene 6921421 6926013 . + . ID=GSCOCG00034468001;Name=Cc10_g07900 | |
| 41668 chr10 manual_curation mRNA 6921421 6926013 . + . ID=GSCOCT00034468001;Parent=GSCOCG00034468001;Name=Cc10_g07900 | |
| 41669 chr10 manual_curation polypeptide 6921612 6926013 . + . ID=GSCOCP00034468001;Dbxref=InterPro:IPR007751,PFAM:PF05057,SwissProt:Q08448,SwissProt:Q12103,TAIR:AT1G10040.1,TAIR:AT4G25770.1,TAIR:AT5G51180.1,TrEMBL:A5AE93,TrEMBL:E0CNW3,TrEMBL:I1K9I5;Derives_from=GSCOCT00034468001;Name=Cc10_g07900;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:alpha/beta-Hydrolases superfamily protein,CC_functional_completeness:complete,CC_gene:YOR059C,CC_gene:YDL109C;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034468001~ alpha/beta-Hydrolases superfamily protein~ YOR059C~ complete;original_location=complement(join(2139289..2139590%2C2138986..2139053%2C2138724..2138794%2C2138363..2138632%2C2137795..2137955%2C2137591..2137646%2C2137358..2137410%2C2137158..2137281%2C2135842..2135943%2C2135189..2135283));owner=coffea | |
| 41670 chr10 manual_curation exon 6925919 6926013 . + . Parent=GSCOCT00034468001 | |
| 41671 chr10 manual_curation exon 6925259 6925360 . + . Parent=GSCOCT00034468001 | |
| 41672 chr10 manual_curation exon 6923921 6924044 . + . Parent=GSCOCT00034468001 | |
| 41673 chr10 manual_curation exon 6923792 6923844 . + . Parent=GSCOCT00034468001 | |
| 41674 chr10 manual_curation exon 6923556 6923611 . + . Parent=GSCOCT00034468001 | |
| 41675 chr10 manual_curation exon 6923247 6923407 . + . Parent=GSCOCT00034468001 | |
| 41676 chr10 manual_curation exon 6922570 6922839 . + . Parent=GSCOCT00034468001 | |
| 41677 chr10 manual_curation exon 6922408 6922478 . + . Parent=GSCOCT00034468001 | |
| 41678 chr10 manual_curation exon 6922149 6922216 . + . Parent=GSCOCT00034468001 | |
| 41679 chr10 manual_curation exon 6921421 6921913 . + . Parent=GSCOCT00034468001 | |
| 41680 chr10 manual_curation CDS 6925919 6926013 . + 1 Parent=GSCOCT00034468001 | |
| 41681 chr10 manual_curation CDS 6925259 6925360 . + 1 Parent=GSCOCT00034468001 | |
| 41682 chr10 manual_curation CDS 6923921 6924044 . + 0 Parent=GSCOCT00034468001 | |
| 41683 chr10 manual_curation CDS 6923792 6923844 . + 1 Parent=GSCOCT00034468001 | |
| 41684 chr10 manual_curation CDS 6923556 6923611 . + 2 Parent=GSCOCT00034468001 | |
| 41685 chr10 manual_curation CDS 6923247 6923407 . + 0 Parent=GSCOCT00034468001 | |
| 41686 chr10 manual_curation CDS 6922570 6922839 . + 0 Parent=GSCOCT00034468001 | |
| 41687 chr10 manual_curation CDS 6922408 6922478 . + 1 Parent=GSCOCT00034468001 | |
| 41688 chr10 manual_curation CDS 6922149 6922216 . + 2 Parent=GSCOCT00034468001 | |
| 41689 chr10 manual_curation CDS 6921612 6921913 . + 0 Parent=GSCOCT00034468001 | |
| 41690 chr10 manual_curation gene 6928785 6929922 . + . ID=GSCOCG00034466001;Name=Cc10_g07910 | |
| 41691 chr10 manual_curation mRNA 6928785 6929922 . + . ID=GSCOCT00034466001;Parent=GSCOCG00034466001;Name=Cc10_g07910 | |
| 41692 chr10 manual_curation polypeptide 6929136 6929898 . + . ID=GSCOCP00034466001;Dbxref=SwissProt:Q9T068,TAIR:AT4G37810.1,TAIR:AT5G10310.1,TrEMBL:A5AE93,TrEMBL:A5AQ12,TrEMBL:C8YZB7;Derives_from=GSCOCT00034466001;Name=Cc10_g07910;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:EPIDERMAL PATTERNING FACTOR-like protein 2,CC_functional_completeness:complete,CC_gene:EPFL2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034466001~ EPIDERMAL PATTERNING FACTOR-like protein 2~ EPFL2~ complete;original_location=complement(join(2131958..2132066%2C2131806..2131852%2C2131304..2131561));owner=coffea | |
| 41693 chr10 manual_curation exon 6929641 6929922 . + . Parent=GSCOCT00034466001 | |
| 41694 chr10 manual_curation exon 6929350 6929396 . + . Parent=GSCOCT00034466001 | |
| 41695 chr10 manual_curation exon 6928785 6929244 . + . Parent=GSCOCT00034466001 | |
| 41696 chr10 manual_curation CDS 6929641 6929898 . + 0 Parent=GSCOCT00034466001 | |
| 41697 chr10 manual_curation CDS 6929350 6929396 . + 1 Parent=GSCOCT00034466001 | |
| 41698 chr10 manual_curation CDS 6929136 6929244 . + 0 Parent=GSCOCT00034466001 | |
| 41699 chr10 manual_curation gene 6937677 6941032 . - . ID=GSCOCG00034463001;Name=Cc10_g07920 | |
| 41700 chr10 manual_curation mRNA 6937677 6941032 . - . ID=GSCOCT00034463001;Parent=GSCOCG00034463001;Name=Cc10_g07920 | |
| 41701 chr10 manual_curation polypeptide 6938285 6940954 . - . ID=GSCOCP00034463001;Dbxref=InterPro:IPR005352,PFAM:PF03694,SwissProt:O80594,TAIR:AT1G10030.1,TrEMBL:A9P8E6,TrEMBL:D6BR64,TrEMBL:G7J410;Derives_from=GSCOCT00034463001;Name=Cc10_g07920;Ontology_term=CC_evidence_code:ISS,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Ergosterol biosynthetic protein 28,CC_functional_completeness:complete,CC_gene:At1g10030;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034463001~ Ergosterol biosynthetic protein 28~ At1g10030~ complete;original_location=join(2120248..2120362%2C2121596..2121802%2C2122850..2122917);owner=coffea | |
| 41702 chr10 manual_curation exon 6940840 6941032 . - . Parent=GSCOCT00034463001 | |
| 41703 chr10 manual_curation exon 6939400 6939606 . - . Parent=GSCOCT00034463001 | |
| 41704 chr10 manual_curation exon 6937677 6938352 . - . Parent=GSCOCT00034463001 | |
| 41705 chr10 manual_curation CDS 6940840 6940954 . - 0 Parent=GSCOCT00034463001 | |
| 41706 chr10 manual_curation CDS 6939400 6939606 . - 1 Parent=GSCOCT00034463001 | |
| 41707 chr10 manual_curation CDS 6938285 6938352 . - 1 Parent=GSCOCT00034463001 | |
| 41708 chr10 manual_curation gene 6959363 6961923 . - . ID=GSCOCG00034461001;Name=Cc10_g07930 | |
| 41709 chr10 manual_curation mRNA 6959363 6961923 . - . ID=GSCOCT00034461001;Parent=GSCOCG00034461001;Name=Cc10_g07930 | |
| 41710 chr10 manual_curation polypeptide 6959650 6961623 . - . ID=GSCOCP00034461001;Dbxref=InterPro:IPR010410,PFAM:PF06219,TAIR:AT1G10020.1,TAIR:AT3G19680.1,TAIR:AT4G29310.1,TrEMBL:A5AE90,TrEMBL:F6H156,TrEMBL:I1K9I9;Derives_from=GSCOCT00034461001;Name=Cc10_g07930;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF1005),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034461001~ Protein of unknown function (DUF1005)~ unknown_gene~ complete;original_location=join(2099579..2100222%2C2100796..2101552);owner=coffea | |
| 41711 chr10 manual_curation exon 6960980 6961923 . - . Parent=GSCOCT00034461001 | |
| 41712 chr10 manual_curation exon 6959363 6960406 . - . Parent=GSCOCT00034461001 | |
| 41713 chr10 manual_curation CDS 6960980 6961623 . - 0 Parent=GSCOCT00034461001 | |
| 41714 chr10 manual_curation CDS 6959650 6960406 . - 2 Parent=GSCOCT00034461001 | |
| 41715 chr10 manual_curation gene 6970938 6975892 . - . ID=GSCOCG00034459001;Name=Cc10_g07940 | |
| 41716 chr10 manual_curation mRNA 6970938 6975892 . - . ID=GSCOCT00034459001;Parent=GSCOCG00034459001;Name=Cc10_g07940 | |
| 41717 chr10 manual_curation polypeptide 6971346 6975892 . - . ID=GSCOCP00034459001;Dbxref=InterPro:IPR008656,InterPro:IPR017427,PFAM:PF05770,PIR:PIRSF038186,SwissProt:O81893,SwissProt:Q84Y01,SwissProt:Q9SUG3,TAIR:AT4G08170.2,TAIR:AT4G33770.1,TAIR:AT5G16760.1,TrEMBL:A7X672,TrEMBL:B9H6R6,TrEMBL:B9R6S4;Derives_from=GSCOCT00034459001;Name=Cc10_g07940;Ontology_term=CC_evidence_code:ISS,GO:0000287,GO:0005524,GO:0005622,GO:0032957,GO:0047325,CC_EC_number:2.7.1.134,PRODUCT:Inositol-tetrakisphosphate 1-kinase 2,CC_functional_completeness:complete,CC_gene:ITPK2,CC_gene:ITPK3,CC_gene:ITPK1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034459001~ Inositol-tetrakisphosphate 1-kinase 2~ ITPK2~ complete;original_location=join(2085310..2085392%2C2086403..2086484%2C2086612..2086644%2C2087612..2087732%2C2088007..2088099%2C2088515..2088622%2C2088714..2088890%2C2089370..2089425%2C2089544..2089628%2C2089786..2089856);owner=coffea | |
| 41718 chr10 manual_curation exon 6975810 6975892 . - . Parent=GSCOCT00034459001 | |
| 41719 chr10 manual_curation exon 6974718 6974799 . - . Parent=GSCOCT00034459001 | |
| 41720 chr10 manual_curation exon 6974558 6974590 . - . Parent=GSCOCT00034459001 | |
| 41721 chr10 manual_curation exon 6973470 6973590 . - . Parent=GSCOCT00034459001 | |
| 41722 chr10 manual_curation exon 6973103 6973195 . - . Parent=GSCOCT00034459001 | |
| 41723 chr10 manual_curation exon 6972580 6972687 . - . Parent=GSCOCT00034459001 | |
| 41724 chr10 manual_curation exon 6972312 6972488 . - . Parent=GSCOCT00034459001 | |
| 41725 chr10 manual_curation exon 6971777 6971832 . - . Parent=GSCOCT00034459001 | |
| 41726 chr10 manual_curation exon 6971574 6971658 . - . Parent=GSCOCT00034459001 | |
| 41727 chr10 manual_curation exon 6970938 6971416 . - . Parent=GSCOCT00034459001 | |
| 41728 chr10 manual_curation CDS 6975810 6975892 . - 0 Parent=GSCOCT00034459001 | |
| 41729 chr10 manual_curation CDS 6974718 6974799 . - 2 Parent=GSCOCT00034459001 | |
| 41730 chr10 manual_curation CDS 6974558 6974590 . - 0 Parent=GSCOCT00034459001 | |
| 41731 chr10 manual_curation CDS 6973470 6973590 . - 0 Parent=GSCOCT00034459001 | |
| 41732 chr10 manual_curation CDS 6973103 6973195 . - 1 Parent=GSCOCT00034459001 | |
| 41733 chr10 manual_curation CDS 6972580 6972687 . - 1 Parent=GSCOCT00034459001 | |
| 41734 chr10 manual_curation CDS 6972312 6972488 . - 1 Parent=GSCOCT00034459001 | |
| 41735 chr10 manual_curation CDS 6971777 6971832 . - 1 Parent=GSCOCT00034459001 | |
| 41736 chr10 manual_curation CDS 6971574 6971658 . - 0 Parent=GSCOCT00034459001 | |
| 41737 chr10 manual_curation CDS 6971346 6971416 . - 1 Parent=GSCOCT00034459001 | |
| 41738 chr10 manual_curation gene 6987827 6990148 . - . ID=GSCOCG00034458001;Name=Cc10_g07950 | |
| 41739 chr10 manual_curation mRNA 6987827 6990148 . - . ID=GSCOCT00034458001;Parent=GSCOCG00034458001;Name=Cc10_g07950 | |
| 41740 chr10 manual_curation polypeptide 6988217 6989713 . - . ID=GSCOCP00034458001;Dbxref=InterPro:IPR012317,InterPro:IPR022003,PFAM:PF00644,PFAM:PF12174,PROFILE:PS51059,SwissProt:O64592,SwissProt:O82289,SwissProt:Q8RY59,TAIR:AT1G32230.1,TAIR:AT1G70440.1,TAIR:AT2G35510.1,TrEMBL:A5AYY8,TrEMBL:B9GNA6,TrEMBL:F6H153;Derives_from=GSCOCT00034458001;Name=Cc10_g07950;Ontology_term=CC_evidence_code:ISS,GO:0003950,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable inactive poly [ADP-ribose] polymerase SRO3,CC_functional_completeness:modules,CC_gene:SRO3,CC_gene:SRO1,CC_gene:RCD1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034458001~ Putative Probable inactive poly [ADP-ribose] polymerase SRO3~ SRO3~ modules;original_location=join(2071489..2072186%2C2072305..2072546%2C2072623..2072762%2C2072890..2072985);owner=coffea | |
| 41741 chr10 manual_curation exon 6989016 6990148 . - . Parent=GSCOCT00034458001 | |
| 41742 chr10 manual_curation exon 6988656 6988897 . - . Parent=GSCOCT00034458001 | |
| 41743 chr10 manual_curation exon 6988440 6988579 . - . Parent=GSCOCT00034458001 | |
| 41744 chr10 manual_curation exon 6987827 6988312 . - . Parent=GSCOCT00034458001 | |
| 41745 chr10 manual_curation CDS 6989016 6989713 . - 0 Parent=GSCOCT00034458001 | |
| 41746 chr10 manual_curation CDS 6988656 6988897 . - 2 Parent=GSCOCT00034458001 | |
| 41747 chr10 manual_curation CDS 6988440 6988579 . - 1 Parent=GSCOCT00034458001 | |
| 41748 chr10 manual_curation CDS 6988217 6988312 . - 0 Parent=GSCOCT00034458001 | |
| 41749 chr10 manual_curation gene 6994320 6999179 . + . ID=GSCOCG00034457001;Name=Cc10_g07960 | |
| 41750 chr10 manual_curation mRNA 6994320 6999179 . + . ID=GSCOCT00034457001;Parent=GSCOCG00034457001;Name=Cc10_g07960 | |
| 41751 chr10 manual_curation polypeptide 6994646 6998504 . + . ID=GSCOCP00034457001;Dbxref=InterPro:IPR004087,InterPro:IPR004088,InterPro:IPR018111,PFAM:PF00013,PROFILE:PS50084,SMART:SM00322,SwissProt:P57721,SwissProt:P57722,SwissProt:P58223,TAIR:AT1G51580.1,TAIR:AT5G15270.2,TAIR:AT5G64390.3,TrEMBL:A5AYY7,TrEMBL:B9GNA5,TrEMBL:F6H152;Derives_from=GSCOCT00034457001;Name=Cc10_g07960;Ontology_term=CC_evidence_code:ISS,GO:0003723,CC_EC_number:missing_EC_number,PRODUCT:Putative KH domain-containing protein At4g18375,CC_functional_completeness:complete,CC_gene:At4g18375,CC_gene:PCBP3,CC_gene:Pcbp3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034457001~ Putative KH domain-containing protein At4g18375~ At4g18375~ complete;original_location=complement(join(2065819..2066556%2C2064917..2065327%2C2064551..2064805%2C2064047..2064400%2C2063718..2063797%2C2063488..2063599%2C2062698..2062841));owner=coffea | |
| 41752 chr10 manual_curation exon 6998646 6999179 . + . Parent=GSCOCT00034457001 | |
| 41753 chr10 manual_curation exon 6994320 6994513 . + . Parent=GSCOCT00034457001 | |
| 41754 chr10 manual_curation exon 6998361 6998518 . + . Parent=GSCOCT00034457001 | |
| 41755 chr10 manual_curation exon 6997603 6997714 . + . Parent=GSCOCT00034457001 | |
| 41756 chr10 manual_curation exon 6997405 6997484 . + . Parent=GSCOCT00034457001 | |
| 41757 chr10 manual_curation exon 6996802 6997155 . + . Parent=GSCOCT00034457001 | |
| 41758 chr10 manual_curation exon 6996397 6996651 . + . Parent=GSCOCT00034457001 | |
| 41759 chr10 manual_curation exon 6995875 6996285 . + . Parent=GSCOCT00034457001 | |
| 41760 chr10 manual_curation exon 6994645 6995383 . + . Parent=GSCOCT00034457001 | |
| 41761 chr10 manual_curation CDS 6998361 6998504 . + 0 Parent=GSCOCT00034457001 | |
| 41762 chr10 manual_curation CDS 6997603 6997714 . + 2 Parent=GSCOCT00034457001 | |
| 41763 chr10 manual_curation CDS 6997405 6997484 . + 0 Parent=GSCOCT00034457001 | |
| 41764 chr10 manual_curation CDS 6996802 6997155 . + 0 Parent=GSCOCT00034457001 | |
| 41765 chr10 manual_curation CDS 6996397 6996651 . + 0 Parent=GSCOCT00034457001 | |
| 41766 chr10 manual_curation CDS 6995875 6996285 . + 0 Parent=GSCOCT00034457001 | |
| 41767 chr10 manual_curation CDS 6994646 6995383 . + 0 Parent=GSCOCT00034457001 | |
| 41768 chr10 manual_curation gene 6999398 7005297 . - . ID=GSCOCG00034456001;Name=Cc10_g07970 | |
| 41769 chr10 manual_curation mRNA 6999398 7005297 . - . ID=GSCOCT00034456001;Parent=GSCOCG00034456001;Name=Cc10_g07970 | |
| 41770 chr10 manual_curation polypeptide 6999763 7005153 . - . ID=GSCOCP00034456001;Dbxref=InterPro:IPR013057,PFAM:PF01490,SwissProt:O80592,SwissProt:P92934,SwissProt:Q42400,TAIR:AT1G10010.1,TAIR:AT1G58360.1,TAIR:AT5G49630.1,TrEMBL:B9R6S0,TrEMBL:D6BV79,TrEMBL:E0CNV4;Derives_from=GSCOCT00034456001;Name=Cc10_g07970;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Amino acid permease 6,CC_functional_completeness:complete,CC_gene:AAP6,CC_gene:AAP1,CC_gene:AAP8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034456001~ Amino acid permease 6~ AAP6~ complete;original_location=join(2056049..2056157%2C2056328..2056561%2C2056668..2056761%2C2056926..2057140%2C2057230..2057372%2C2060694..2060921%2C2061014..2061439);owner=coffea | |
| 41771 chr10 manual_curation exon 7005045 7005297 . - . Parent=GSCOCT00034456001 | |
| 41772 chr10 manual_curation exon 7004641 7004874 . - . Parent=GSCOCT00034456001 | |
| 41773 chr10 manual_curation exon 7004441 7004534 . - . Parent=GSCOCT00034456001 | |
| 41774 chr10 manual_curation exon 7004062 7004276 . - . Parent=GSCOCT00034456001 | |
| 41775 chr10 manual_curation exon 7003830 7003972 . - . Parent=GSCOCT00034456001 | |
| 41776 chr10 manual_curation exon 7000281 7000508 . - . Parent=GSCOCT00034456001 | |
| 41777 chr10 manual_curation exon 6999398 7000188 . - . Parent=GSCOCT00034456001 | |
| 41778 chr10 manual_curation CDS 7005045 7005153 . - 0 Parent=GSCOCT00034456001 | |
| 41779 chr10 manual_curation CDS 7004641 7004874 . - 1 Parent=GSCOCT00034456001 | |
| 41780 chr10 manual_curation CDS 7004441 7004534 . - 1 Parent=GSCOCT00034456001 | |
| 41781 chr10 manual_curation CDS 7004062 7004276 . - 2 Parent=GSCOCT00034456001 | |
| 41782 chr10 manual_curation CDS 7003830 7003972 . - 1 Parent=GSCOCT00034456001 | |
| 41783 chr10 manual_curation CDS 7000281 7000508 . - 0 Parent=GSCOCT00034456001 | |
| 41784 chr10 manual_curation CDS 6999763 7000188 . - 0 Parent=GSCOCT00034456001 | |
| 41785 chr10 manual_curation gene 7020998 7024282 . - . ID=GSCOCG00034455001;Name=Cc10_g07980 | |
| 41786 chr10 manual_curation mRNA 7020998 7024282 . - . ID=GSCOCT00034455001;Parent=GSCOCG00034455001;Name=Cc10_g07980 | |
| 41787 chr10 manual_curation polypeptide 7020998 7024282 . - . ID=GSCOCP00034455001;Dbxref=InterPro:IPR013057,PFAM:PF01490,SwissProt:O80592,SwissProt:P92934,SwissProt:Q42400,TAIR:AT1G10010.1,TAIR:AT1G58360.1,TAIR:AT5G49630.1,TrEMBL:B9R6S0,TrEMBL:D6BV79,TrEMBL:E0CNV4;Derives_from=GSCOCT00034455001;Name=Cc10_g07980;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Amino acid permease 6,CC_functional_completeness:complete,CC_gene:AAP6,CC_gene:AAP1,CC_gene:AAP8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034455001~ Amino acid permease 6~ AAP6~ complete;original_location=join(2036920..2037028%2C2037194..2037427%2C2037536..2037629%2C2037782..2037996%2C2038086..2038228%2C2039459..2039686%2C2039779..2040204);owner=coffea | |
| 41788 chr10 manual_curation exon 7024174 7024282 . - . Parent=GSCOCT00034455001 | |
| 41789 chr10 manual_curation exon 7023775 7024008 . - . Parent=GSCOCT00034455001 | |
| 41790 chr10 manual_curation exon 7023573 7023666 . - . Parent=GSCOCT00034455001 | |
| 41791 chr10 manual_curation exon 7023206 7023420 . - . Parent=GSCOCT00034455001 | |
| 41792 chr10 manual_curation exon 7022974 7023116 . - . Parent=GSCOCT00034455001 | |
| 41793 chr10 manual_curation exon 7021516 7021743 . - . Parent=GSCOCT00034455001 | |
| 41794 chr10 manual_curation exon 7020998 7021423 . - . Parent=GSCOCT00034455001 | |
| 41795 chr10 manual_curation CDS 7024174 7024282 . - 0 Parent=GSCOCT00034455001 | |
| 41796 chr10 manual_curation CDS 7023775 7024008 . - 1 Parent=GSCOCT00034455001 | |
| 41797 chr10 manual_curation CDS 7023573 7023666 . - 1 Parent=GSCOCT00034455001 | |
| 41798 chr10 manual_curation CDS 7023206 7023420 . - 2 Parent=GSCOCT00034455001 | |
| 41799 chr10 manual_curation CDS 7022974 7023116 . - 1 Parent=GSCOCT00034455001 | |
| 41800 chr10 manual_curation CDS 7021516 7021743 . - 0 Parent=GSCOCT00034455001 | |
| 41801 chr10 manual_curation CDS 7020998 7021423 . - 0 Parent=GSCOCT00034455001 | |
| 41802 chr10 manual_curation gene 7025060 7028436 . + . ID=GSCOCG00034454001;Name=Cc10_g07990 | |
| 41803 chr10 manual_curation mRNA 7025060 7028436 . + . ID=GSCOCT00034454001;Parent=GSCOCG00034454001;Name=Cc10_g07990 | |
| 41804 chr10 manual_curation polypeptide 7025611 7028436 . + . ID=GSCOCP00034454001;Dbxref=InterPro:IPR015813,InterPro:IPR018129,InterPro:IPR021135,PFAM:PF00311,PRINTS:PR00150,PROSITE:PS00781,SUPERFAMILY:SSF51621,TAIR:AT1G53310.1,TAIR:AT2G42600.2,TAIR:AT3G14940.1;Derives_from=GSCOCT00034454001;Name=Cc10_g07990;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0006099,GO:0008964,GO:0015977,CC_EC_number:4.1.1.31,PRODUCT:phosphoenolpyruvate carboxylase 3,CC_functional_completeness:fragment,CC_gene:PPC1,CC_gene:PPC,CC_gene:PPCC,CC_gene:PPC16,CC_gene:PPCB,CC_gene:PPCA1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034454001~ phosphoenolpyruvate carboxylase 3~ PPC1~ fragment;original_location=complement(join(2035421..2035591%2C2034477..2034868%2C2034290..2034374%2C2033271..2033493%2C2032766..2032929));owner=coffea | |
| 41805 chr10 manual_curation exon 7025060 7025265 . + . Parent=GSCOCT00034454001 | |
| 41806 chr10 manual_curation exon 7028273 7028436 . + . Parent=GSCOCT00034454001 | |
| 41807 chr10 manual_curation exon 7027709 7027931 . + . Parent=GSCOCT00034454001 | |
| 41808 chr10 manual_curation exon 7026828 7026912 . + . Parent=GSCOCT00034454001 | |
| 41809 chr10 manual_curation exon 7026334 7026725 . + . Parent=GSCOCT00034454001 | |
| 41810 chr10 manual_curation exon 7025556 7025781 . + . Parent=GSCOCT00034454001 | |
| 41811 chr10 manual_curation CDS 7028273 7028436 . + 1 Parent=GSCOCT00034454001 | |
| 41812 chr10 manual_curation CDS 7027709 7027931 . + 0 Parent=GSCOCT00034454001 | |
| 41813 chr10 manual_curation CDS 7026828 7026912 . + 2 Parent=GSCOCT00034454001 | |
| 41814 chr10 manual_curation CDS 7026334 7026725 . + 0 Parent=GSCOCT00034454001 | |
| 41815 chr10 manual_curation CDS 7025611 7025781 . + 0 Parent=GSCOCT00034454001 | |
| 41816 chr10 manual_curation gene 7033394 7038265 . + . ID=GSCOCG00034453001;Name=Cc10_g08000 | |
| 41817 chr10 manual_curation mRNA 7033394 7038265 . + . ID=GSCOCT00034453001;Parent=GSCOCG00034453001;Name=Cc10_g08000 | |
| 41818 chr10 manual_curation polypeptide 7033569 7038008 . + . ID=GSCOCP00034453001;Dbxref=InterPro:IPR000577,InterPro:IPR018484,InterPro:IPR018485,PANTHER:PTHR10196,PFAM:PF00370,PFAM:PF02782,SwissProt:Q3SYZ6,SwissProt:Q3TNA1,SwissProt:Q5R830,TAIR:AT5G49650.1,TrEMBL:E0CNV3,TrEMBL:G7J420,TrEMBL:I1JV02;Derives_from=GSCOCT00034453001;Name=Cc10_g08000;Ontology_term=CC_evidence_code:ISS,GO:0005975,CC_EC_number:2.7.1.17,PRODUCT:Xylulose kinase,CC_functional_completeness:complete,CC_gene:XYLB,CC_gene:Xylb;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034453001~ Xylulose kinase~ XYLB~ complete;original_location=complement(join(2027575..2027633%2C2026597..2027251%2C2026368..2026456%2C2025865..2025929%2C2025111..2025166%2C2024505..2024625%2C2024360..2024434%2C2024204..2024257%2C2023877..2023971%2C2023625..2023799%2C2023194..2023426));owner=coffea | |
| 41819 chr10 manual_curation exon 7037776 7038265 . + . Parent=GSCOCT00034453001 | |
| 41820 chr10 manual_curation exon 7037403 7037577 . + . Parent=GSCOCT00034453001 | |
| 41821 chr10 manual_curation exon 7037231 7037325 . + . Parent=GSCOCT00034453001 | |
| 41822 chr10 manual_curation exon 7036945 7036998 . + . Parent=GSCOCT00034453001 | |
| 41823 chr10 manual_curation exon 7036768 7036842 . + . Parent=GSCOCT00034453001 | |
| 41824 chr10 manual_curation exon 7036577 7036697 . + . Parent=GSCOCT00034453001 | |
| 41825 chr10 manual_curation exon 7036036 7036091 . + . Parent=GSCOCT00034453001 | |
| 41826 chr10 manual_curation exon 7035273 7035337 . + . Parent=GSCOCT00034453001 | |
| 41827 chr10 manual_curation exon 7034746 7034834 . + . Parent=GSCOCT00034453001 | |
| 41828 chr10 manual_curation exon 7033951 7034605 . + . Parent=GSCOCT00034453001 | |
| 41829 chr10 manual_curation exon 7033394 7033627 . + . Parent=GSCOCT00034453001 | |
| 41830 chr10 manual_curation CDS 7037776 7038008 . + 1 Parent=GSCOCT00034453001 | |
| 41831 chr10 manual_curation CDS 7037403 7037577 . + 0 Parent=GSCOCT00034453001 | |
| 41832 chr10 manual_curation CDS 7037231 7037325 . + 1 Parent=GSCOCT00034453001 | |
| 41833 chr10 manual_curation CDS 7036945 7036998 . + 1 Parent=GSCOCT00034453001 | |
| 41834 chr10 manual_curation CDS 7036768 7036842 . + 1 Parent=GSCOCT00034453001 | |
| 41835 chr10 manual_curation CDS 7036577 7036697 . + 0 Parent=GSCOCT00034453001 | |
| 41836 chr10 manual_curation CDS 7036036 7036091 . + 1 Parent=GSCOCT00034453001 | |
| 41837 chr10 manual_curation CDS 7035273 7035337 . + 2 Parent=GSCOCT00034453001 | |
| 41838 chr10 manual_curation CDS 7034746 7034834 . + 0 Parent=GSCOCT00034453001 | |
| 41839 chr10 manual_curation CDS 7033951 7034605 . + 2 Parent=GSCOCT00034453001 | |
| 41840 chr10 manual_curation CDS 7033569 7033627 . + 0 Parent=GSCOCT00034453001 | |
| 41841 chr10 manual_curation gene 7038651 7042949 . + . ID=GSCOCG00034452001;Name=Cc10_g08010 | |
| 41842 chr10 manual_curation mRNA 7038651 7042949 . + . ID=GSCOCT00034452001;Parent=GSCOCG00034452001;Name=Cc10_g08010 | |
| 41843 chr10 manual_curation polypeptide 7038868 7042900 . + . ID=GSCOCP00034452001;Dbxref=InterPro:IPR000577,InterPro:IPR018484,InterPro:IPR018485,PANTHER:PTHR10196,PFAM:PF00370,PFAM:PF02782,SwissProt:O75191,SwissProt:Q3SYZ6,SwissProt:Q5R830,TAIR:AT5G49650.1,TrEMBL:E0CNV3,TrEMBL:G7J420,TrEMBL:I1JV02;Derives_from=GSCOCT00034452001;Name=Cc10_g08010;Ontology_term=CC_evidence_code:ISS,GO:0005975,CC_EC_number:2.7.1.17,PRODUCT:Xylulose kinase,CC_functional_completeness:complete,CC_gene:XYLB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034452001~ Xylulose kinase~ XYLB~ complete;original_location=complement(join(2022276..2022334%2C2021476..2022130%2C2021263..2021351%2C2020718..2020782%2C2020213..2020268%2C2019817..2019937%2C2019618..2019692%2C2019483..2019536%2C2018972..2019063%2C2018694..2018869%2C2018302..2018551));owner=coffea | |
| 41844 chr10 manual_curation exon 7042651 7042949 . + . Parent=GSCOCT00034452001 | |
| 41845 chr10 manual_curation exon 7042333 7042508 . + . Parent=GSCOCT00034452001 | |
| 41846 chr10 manual_curation exon 7042139 7042230 . + . Parent=GSCOCT00034452001 | |
| 41847 chr10 manual_curation exon 7041666 7041719 . + . Parent=GSCOCT00034452001 | |
| 41848 chr10 manual_curation exon 7041510 7041584 . + . Parent=GSCOCT00034452001 | |
| 41849 chr10 manual_curation exon 7041265 7041385 . + . Parent=GSCOCT00034452001 | |
| 41850 chr10 manual_curation exon 7040934 7040989 . + . Parent=GSCOCT00034452001 | |
| 41851 chr10 manual_curation exon 7040420 7040484 . + . Parent=GSCOCT00034452001 | |
| 41852 chr10 manual_curation exon 7039851 7039939 . + . Parent=GSCOCT00034452001 | |
| 41853 chr10 manual_curation exon 7039072 7039726 . + . Parent=GSCOCT00034452001 | |
| 41854 chr10 manual_curation exon 7038651 7038926 . + . Parent=GSCOCT00034452001 | |
| 41855 chr10 manual_curation CDS 7042651 7042900 . + 2 Parent=GSCOCT00034452001 | |
| 41856 chr10 manual_curation CDS 7042333 7042508 . + 0 Parent=GSCOCT00034452001 | |
| 41857 chr10 manual_curation CDS 7042139 7042230 . + 1 Parent=GSCOCT00034452001 | |
| 41858 chr10 manual_curation CDS 7041666 7041719 . + 1 Parent=GSCOCT00034452001 | |
| 41859 chr10 manual_curation CDS 7041510 7041584 . + 1 Parent=GSCOCT00034452001 | |
| 41860 chr10 manual_curation CDS 7041265 7041385 . + 0 Parent=GSCOCT00034452001 | |
| 41861 chr10 manual_curation CDS 7040934 7040989 . + 1 Parent=GSCOCT00034452001 | |
| 41862 chr10 manual_curation CDS 7040420 7040484 . + 2 Parent=GSCOCT00034452001 | |
| 41863 chr10 manual_curation CDS 7039851 7039939 . + 0 Parent=GSCOCT00034452001 | |
| 41864 chr10 manual_curation CDS 7039072 7039726 . + 2 Parent=GSCOCT00034452001 | |
| 41865 chr10 manual_curation CDS 7038868 7038926 . + 0 Parent=GSCOCT00034452001 | |
| 41866 chr10 manual_curation gene 7043007 7045501 . - . ID=GSCOCG00034451001;Name=Cc10_g08020 | |
| 41867 chr10 manual_curation mRNA 7043007 7045501 . - . ID=GSCOCT00034451001;Parent=GSCOCG00034451001;Name=Cc10_g08020 | |
| 41868 chr10 manual_curation polypeptide 7043401 7045333 . - . ID=GSCOCP00034451001;Dbxref=GENE3D:G3DSA:3.30.1330.20,GENE3D:G3DSA:3.40.50.1440,InterPro:IPR000217,InterPro:IPR002452,InterPro:IPR003008,InterPro:IPR008280,InterPro:IPR017975,InterPro:IPR018316,PANTHER:PTHR11588,PANTHER:PTHR11588:SF10,PFAM:PF00091,PFAM:PF03953,PRINTS:PR01161,PRINTS:PR01162,PROSITE:PS00227,SMART:SM00864,SMART:SM00865,SUPERFAMILY:SSF52490,SUPERFAMILY:SSF55307,SwissProt:P33629,SwissProt:Q6VAF9,SwissProt:Q6VAG0,TAIR:AT1G04820.1,TAIR:AT1G50010.1,TAIR:AT4G14960.2,TrEMBL:A9PL18,TrEMBL:B7TIW7,TrEMBL:C0KDV9;Derives_from=GSCOCT00034451001;Name=Cc10_g08020;Ontology_term=CC_evidence_code:ISS,GO:0003924,GO:0005198,GO:0005525,GO:0005874,GO:0007017,GO:0007018,GO:0043234,GO:0051258,CC_EC_number:missing_EC_number,PRODUCT:Tubulin alpha-2 chain,CC_functional_completeness:complete,CC_gene:TUBA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034451001~ Tubulin alpha-2 chain~ TUBA~ complete;original_location=join(2015869..2015961%2C2016453..2017058%2C2017148..2017801);owner=coffea | |
| 41869 chr10 manual_curation exon 7045241 7045501 . - . Parent=GSCOCT00034451001 | |
| 41870 chr10 manual_curation exon 7044144 7044749 . - . Parent=GSCOCT00034451001 | |
| 41871 chr10 manual_curation exon 7043007 7044054 . - . Parent=GSCOCT00034451001 | |
| 41872 chr10 manual_curation CDS 7045241 7045333 . - 0 Parent=GSCOCT00034451001 | |
| 41873 chr10 manual_curation CDS 7044144 7044749 . - 0 Parent=GSCOCT00034451001 | |
| 41874 chr10 manual_curation CDS 7043401 7044054 . - 0 Parent=GSCOCT00034451001 | |
| 41875 chr10 manual_curation gene 7067936 7071621 . - . ID=GSCOCG00034449001;Name=Cc10_g08030 | |
| 41876 chr10 manual_curation mRNA 7067936 7071621 . - . ID=GSCOCT00034449001;Parent=GSCOCG00034449001;Name=Cc10_g08030 | |
| 41877 chr10 manual_curation polypeptide 7068103 7071621 . - . ID=GSCOCP00034449001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:P47735,SwissProt:Q9LJM4,SwissProt:Q9SGP2,TAIR:AT1G09970.2,TAIR:AT1G28440.1,TAIR:AT5G49660.1,TrEMBL:B9GNA0,TrEMBL:B9R6R5,TrEMBL:G5D8T3;Derives_from=GSCOCT00034449001;Name=Cc10_g08030;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Receptor-like protein kinase HSL1,CC_functional_completeness:complete,CC_gene:HSL1,CC_gene:RLK5,CC_gene:IKU2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034449001~ Putative Receptor-like protein kinase HSL1~ HSL1~ complete;original_location=join(1989581..1989788%2C1989873..1992290%2C1992705..1993099);owner=coffea | |
| 41878 chr10 manual_curation exon 7071414 7071621 . - . Parent=GSCOCT00034449001 | |
| 41879 chr10 manual_curation exon 7068912 7071329 . - . Parent=GSCOCT00034449001 | |
| 41880 chr10 manual_curation exon 7067936 7068497 . - . Parent=GSCOCT00034449001 | |
| 41881 chr10 manual_curation CDS 7071414 7071621 . - 0 Parent=GSCOCT00034449001 | |
| 41882 chr10 manual_curation CDS 7068912 7071329 . - 1 Parent=GSCOCT00034449001 | |
| 41883 chr10 manual_curation CDS 7068103 7068497 . - 1 Parent=GSCOCT00034449001 | |
| 41884 chr10 manual_curation gene 7091621 7099713 . + . ID=GSCOCG00034447001;Name=Cc10_g08040 | |
| 41885 chr10 manual_curation mRNA 7091621 7099713 . + . ID=GSCOCT00034447001;Parent=GSCOCG00034447001;Name=Cc10_g08040 | |
| 41886 chr10 manual_curation polypeptide 7092141 7099232 . + . ID=GSCOCP00034447001;Dbxref=InterPro:IPR001650,InterPro:IPR011545,InterPro:IPR014001,InterPro:IPR014021,PFAM:PF00270,PFAM:PF00271,PROFILE:PS51192,PROFILE:PS51194,SMART:SM00487,SMART:SM00490,SwissProt:Q10I26,SwissProt:Q5VNM3,TAIR:AT1G51380.1,TAIR:AT1G54270.1,TAIR:AT3G19760.1,TrEMBL:B9S4I6;Derives_from=GSCOCT00034447001;Name=Cc10_g08040;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0004386,GO:0005524,GO:0008026,CC_EC_number:missing_EC_number,PRODUCT:DEAD-box ATP-dependent RNA helicase 2,CC_functional_completeness:fragment,CC_gene:Os01g0639100,CC_gene:Os03g0566800;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034447001~ DEAD-box ATP-dependent RNA helicase 2~ Os01g0639100~ fragment;original_location=complement(join(1969015..1969061%2C1968021..1968261%2C1967832..1967912%2C1967091..1967216%2C1966893..1967012%2C1965867..1966034%2C1963201..1963287%2C1961970..1962083));owner=coffea | |
| 41887 chr10 manual_curation exon 7099119 7099713 . + . Parent=GSCOCT00034447001 | |
| 41888 chr10 manual_curation exon 7097915 7098001 . + . Parent=GSCOCT00034447001 | |
| 41889 chr10 manual_curation exon 7095168 7095335 . + . Parent=GSCOCT00034447001 | |
| 41890 chr10 manual_curation exon 7094190 7094309 . + . Parent=GSCOCT00034447001 | |
| 41891 chr10 manual_curation exon 7093986 7094111 . + . Parent=GSCOCT00034447001 | |
| 41892 chr10 manual_curation exon 7093290 7093370 . + . Parent=GSCOCT00034447001 | |
| 41893 chr10 manual_curation exon 7092941 7093181 . + . Parent=GSCOCT00034447001 | |
| 41894 chr10 manual_curation exon 7091621 7092187 . + . Parent=GSCOCT00034447001 | |
| 41895 chr10 manual_curation CDS 7099119 7099232 . + 0 Parent=GSCOCT00034447001 | |
| 41896 chr10 manual_curation CDS 7097915 7098001 . + 0 Parent=GSCOCT00034447001 | |
| 41897 chr10 manual_curation CDS 7095168 7095335 . + 0 Parent=GSCOCT00034447001 | |
| 41898 chr10 manual_curation CDS 7094190 7094309 . + 0 Parent=GSCOCT00034447001 | |
| 41899 chr10 manual_curation CDS 7093986 7094111 . + 0 Parent=GSCOCT00034447001 | |
| 41900 chr10 manual_curation CDS 7093290 7093370 . + 0 Parent=GSCOCT00034447001 | |
| 41901 chr10 manual_curation CDS 7092941 7093181 . + 2 Parent=GSCOCT00034447001 | |
| 41902 chr10 manual_curation CDS 7092141 7092187 . + 0 Parent=GSCOCT00034447001 | |
| 41903 chr10 manual_curation gene 7107992 7109354 . - . ID=GSCOCG00034444001;Name=Cc10_g08050 | |
| 41904 chr10 manual_curation mRNA 7107992 7109354 . - . ID=GSCOCT00034444001;Parent=GSCOCG00034444001;Name=Cc10_g08050 | |
| 41905 chr10 manual_curation polypeptide 7107992 7108351 . - . ID=GSCOCP00034444001;Dbxref=InterPro:IPR002480,PANTHER:PTHR21337,PFAM:PF01474,SwissProt:P21357,SwissProt:P27608,SwissProt:P37216,TAIR:AT1G22410.1,TAIR:AT4G33510.1,TAIR:AT4G39980.1,TrEMBL:B9RJN2,TrEMBL:D0VBC5,TrEMBL:O24051;Derives_from=GSCOCT00034444001;Name=Cc10_g08050;Ontology_term=CC_evidence_code:ISS,GO:0003849,GO:0009073,CC_EC_number:2.5.1.54,PRODUCT:Phospho-2-dehydro-3-deoxyheptonate aldolase 1%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:SHKA,CC_gene:DHAPS-1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034444001~ Phospho-2-dehydro-3-deoxyheptonate aldolase 1%2C chloroplastic~ SHKA~ fragment;original_location=1952851..1953210;owner=coffea | |
| 41906 chr10 manual_curation exon 7109157 7109354 . - . Parent=GSCOCT00034444001 | |
| 41907 chr10 manual_curation exon 7107992 7108746 . - . Parent=GSCOCT00034444001 | |
| 41908 chr10 manual_curation CDS 7107992 7108351 . - 0 Parent=GSCOCT00034444001 | |
| 41909 chr10 manual_curation gene 7138740 7141106 . - . ID=GSCOCG00034442001;Name=Cc10_g08060 | |
| 41910 chr10 manual_curation mRNA 7138740 7141106 . - . ID=GSCOCT00034442001;Parent=GSCOCG00034442001;Name=Cc10_g08060 | |
| 41911 chr10 manual_curation polypeptide 7138825 7140986 . - . ID=GSCOCP00034442001;Dbxref=InterPro:IPR001841,InterPro:IPR002867,PFAM:PF01485,PROFILE:PS50089,SMART:SM00647,SwissProt:D3YYI7,SwissProt:Q4KLT0,SwissProt:Q8W468,TAIR:AT3G14250.1,TAIR:AT3G53690.1,TAIR:AT5G37560.1,TrEMBL:B9GLS3,TrEMBL:B9P575,TrEMBL:D7T401;Derives_from=GSCOCT00034442001;Name=Cc10_g08060;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative RING/U-box superfamily protein,CC_functional_completeness:modules,CC_gene:rnf217,CC_gene:Rnf217,CC_gene:ARI8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034442001~ Putative RING/U-box superfamily protein~ rnf217~ modules;original_location=join(1920216..1920486%2C1921605..1922377);owner=coffea | |
| 41912 chr10 manual_curation exon 7140716 7141106 . - . Parent=GSCOCT00034442001 | |
| 41913 chr10 manual_curation exon 7138740 7139597 . - . Parent=GSCOCT00034442001 | |
| 41914 chr10 manual_curation CDS 7140716 7140986 . - 0 Parent=GSCOCT00034442001 | |
| 41915 chr10 manual_curation CDS 7138825 7139597 . - 1 Parent=GSCOCT00034442001 | |
| 41916 chr10 manual_curation gene 7147687 7149400 . - . ID=GSCOCG00034441001;Name=Cc10_g08070 | |
| 41917 chr10 manual_curation mRNA 7147687 7149400 . - . ID=GSCOCT00034441001;Parent=GSCOCG00034441001;Name=Cc10_g08070 | |
| 41918 chr10 manual_curation polypeptide 7148316 7148711 . - . ID=GSCOCP00034441001;Dbxref=InterPro:IPR013870,PFAM:PF08561,TAIR:AT3G01740.1,TAIR:AT5G14290.1,TrEMBL:B9RBN6,TrEMBL:C6SYP3,TrEMBL:F6I5L7;Derives_from=GSCOCT00034441001;Name=Cc10_g08070;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Mitochondrial ribosomal protein L37,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034441001~ Mitochondrial ribosomal protein L37~ unknown_gene~ complete;original_location=1912491..1912886;owner=coffea | |
| 41919 chr10 manual_curation exon 7149329 7149400 . - . Parent=GSCOCT00034441001 | |
| 41920 chr10 manual_curation exon 7149044 7149224 . - . Parent=GSCOCT00034441001 | |
| 41921 chr10 manual_curation exon 7147687 7148719 . - . Parent=GSCOCT00034441001 | |
| 41922 chr10 manual_curation CDS 7148316 7148711 . - 0 Parent=GSCOCT00034441001 | |
| 41923 chr10 manual_curation gene 7150715 7154567 . - . ID=GSCOCG00034440001;Name=Cc10_g08080 | |
| 41924 chr10 manual_curation mRNA 7150715 7154567 . - . ID=GSCOCT00034440001;Parent=GSCOCG00034440001;Name=Cc10_g08080 | |
| 41925 chr10 manual_curation polypeptide 7151262 7154567 . - . ID=GSCOCP00034440001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:C0LGX3,SwissProt:Q9LJM4,SwissProt:Q9SGP2,TAIR:AT1G09970.2,TAIR:AT3G19700.1,TAIR:AT5G49660.1,TrEMBL:B9R6R4,TrEMBL:F6GZM1,TrEMBL:I1JV05;Derives_from=GSCOCT00034440001;Name=Cc10_g08080;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Receptor-like protein kinase HAIKU2,CC_functional_completeness:complete,CC_gene:IKU2,CC_gene:HSL1,CC_gene:HSL2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034440001~ Receptor-like protein kinase HAIKU2~ IKU2~ complete;original_location=join(1906635..1906749%2C1906804..1909455%2C1909552..1909940);owner=coffea | |
| 41926 chr10 manual_curation exon 7154453 7154567 . - . Parent=GSCOCT00034440001 | |
| 41927 chr10 manual_curation exon 7151747 7154398 . - . Parent=GSCOCT00034440001 | |
| 41928 chr10 manual_curation exon 7150715 7151650 . - . Parent=GSCOCT00034440001 | |
| 41929 chr10 manual_curation CDS 7154453 7154567 . - 0 Parent=GSCOCT00034440001 | |
| 41930 chr10 manual_curation CDS 7151747 7154398 . - 1 Parent=GSCOCT00034440001 | |
| 41931 chr10 manual_curation CDS 7151262 7151650 . - 1 Parent=GSCOCT00034440001 | |
| 41932 chr10 manual_curation gene 7173551 7174342 . + . ID=GSCOCG00034439001;Name=Cc10_g08090 | |
| 41933 chr10 manual_curation mRNA 7173551 7174342 . + . ID=GSCOCT00034439001;Parent=GSCOCG00034439001;Name=Cc10_g08090 | |
| 41934 chr10 manual_curation polypeptide 7173551 7174342 . + . ID=GSCOCP00034439001;Dbxref=InterPro:IPR006076,PFAM:PF01266,TAIR:AT5G48440.1,TrEMBL:B9SMP6,TrEMBL:F6HWI1,TrEMBL:G7KWY6;Derives_from=GSCOCT00034439001;Name=Cc10_g08090;Ontology_term=CC_evidence_code:ISS,GO:0016491,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034439001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=complement(join(1887192..1887651%2C1886860..1887053));owner=coffea | |
| 41935 chr10 manual_curation exon 7174149 7174342 . + . Parent=GSCOCT00034439001 | |
| 41936 chr10 manual_curation exon 7173551 7174010 . + . Parent=GSCOCT00034439001 | |
| 41937 chr10 manual_curation CDS 7174149 7174342 . + 1 Parent=GSCOCT00034439001 | |
| 41938 chr10 manual_curation CDS 7173551 7174010 . + 0 Parent=GSCOCT00034439001 | |
| 41939 chr10 manual_curation gene 7183205 7188607 . + . ID=GSCOCG00034438001;Name=Cc10_g08100 | |
| 41940 chr10 manual_curation mRNA 7183205 7188607 . + . ID=GSCOCT00034438001;Parent=GSCOCG00034438001;Name=Cc10_g08100 | |
| 41941 chr10 manual_curation polypeptide 7183538 7187790 . + . ID=GSCOCP00034438001;Dbxref=InterPro:IPR005989,InterPro:IPR011701,InterPro:IPR016196,PFAM:PF07690,SUPERFAMILY:SSF103473,SwissProt:A2ZN77,SwissProt:Q0ILJ3,SwissProt:Q9FE59,TAIR:AT1G09960.1,TAIR:AT1G22710.1,TAIR:AT5G06170.1,TIGRFAMs:TIGR01301,TrEMBL:D1N0F9,TrEMBL:Q9FV92,TrEMBL:Q9FVJ6;Derives_from=GSCOCT00034438001;Name=Cc10_g08100;Ontology_term=CC_evidence_code:ISS,GO:0005887,GO:0008515,GO:0015770,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Sucrose transport protein SUC4,CC_functional_completeness:complete,CC_gene:SUC4,CC_gene:SUT2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034438001~ Sucrose transport protein SUC4~ SUC4~ complete;original_location=complement(join(1877154..1877664%2C1874866..1875608%2C1874569..1874632%2C1874448..1874491%2C1873412..1873570));owner=coffea | |
| 41942 chr10 manual_curation exon 7187632 7188607 . + . Parent=GSCOCT00034438001 | |
| 41943 chr10 manual_curation exon 7186711 7186754 . + . Parent=GSCOCT00034438001 | |
| 41944 chr10 manual_curation exon 7186570 7186633 . + . Parent=GSCOCT00034438001 | |
| 41945 chr10 manual_curation exon 7185594 7186336 . + . Parent=GSCOCT00034438001 | |
| 41946 chr10 manual_curation exon 7183205 7184048 . + . Parent=GSCOCT00034438001 | |
| 41947 chr10 manual_curation CDS 7187632 7187790 . + 0 Parent=GSCOCT00034438001 | |
| 41948 chr10 manual_curation CDS 7186711 7186754 . + 1 Parent=GSCOCT00034438001 | |
| 41949 chr10 manual_curation CDS 7186570 7186633 . + 0 Parent=GSCOCT00034438001 | |
| 41950 chr10 manual_curation CDS 7185594 7186336 . + 1 Parent=GSCOCT00034438001 | |
| 41951 chr10 manual_curation CDS 7183538 7184048 . + 0 Parent=GSCOCT00034438001 | |
| 41952 chr10 manual_curation gene 7236305 7239331 . + . ID=GSCOCG00034436001;Name=Cc10_g08110 | |
| 41953 chr10 manual_curation mRNA 7236305 7239331 . + . ID=GSCOCT00034436001;Parent=GSCOCG00034436001;Name=Cc10_g08110 | |
| 41954 chr10 manual_curation polypeptide 7236624 7238772 . + . ID=GSCOCP00034436001;Dbxref=InterPro:IPR005027,PANTHER:PTHR10896,PFAM:PF03360,SwissProt:Q5QM25,SwissProt:Q8S626,SwissProt:Q9SXC4,TAIR:AT1G27600.1,TAIR:AT2G37090.1,TAIR:AT5G67230.1,TrEMBL:B9GN51,TrEMBL:B9R6Q8,TrEMBL:F6GZL7;Derives_from=GSCOCT00034436001;Name=Cc10_g08110;Ontology_term=CC_evidence_code:ISS,GO:0015018,GO:0016020,CC_EC_number:2.4.1.135,PRODUCT:Probable beta-1%2C4-xylosyltransferase IRX9H,CC_functional_completeness:complete,CC_gene:IRX9H,CC_gene:Os10g0205300,CC_gene:Os01g0675500;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034436001~ Probable beta-1%2C4-xylosyltransferase IRX9H~ IRX9H~ complete;original_location=complement(join(1824207..1824578%2C1823773..1824137%2C1822744..1822993%2C1822430..1822603));owner=coffea | |
| 41955 chr10 manual_curation exon 7238599 7239331 . + . Parent=GSCOCT00034436001 | |
| 41956 chr10 manual_curation exon 7238209 7238458 . + . Parent=GSCOCT00034436001 | |
| 41957 chr10 manual_curation exon 7237065 7237429 . + . Parent=GSCOCT00034436001 | |
| 41958 chr10 manual_curation exon 7236305 7236995 . + . Parent=GSCOCT00034436001 | |
| 41959 chr10 manual_curation CDS 7238599 7238772 . + 0 Parent=GSCOCT00034436001 | |
| 41960 chr10 manual_curation CDS 7238209 7238458 . + 2 Parent=GSCOCT00034436001 | |
| 41961 chr10 manual_curation CDS 7237065 7237429 . + 0 Parent=GSCOCT00034436001 | |
| 41962 chr10 manual_curation CDS 7236624 7236995 . + 0 Parent=GSCOCT00034436001 | |
| 41963 chr10 manual_curation gene 7241873 7245028 . + . ID=GSCOCG00034434001;Name=Cc10_g08120 | |
| 41964 chr10 manual_curation mRNA 7241873 7245028 . + . ID=GSCOCT00034434001;Parent=GSCOCG00034434001;Name=Cc10_g08120 | |
| 41965 chr10 manual_curation polypeptide 7241873 7244351 . + . ID=GSCOCP00034434001;Dbxref=InterPro:IPR005027,PANTHER:PTHR10896,PFAM:PF03360,SwissProt:Q5QM25,SwissProt:Q8S626,SwissProt:Q9SXC4,TAIR:AT1G27600.1,TAIR:AT2G37090.1,TAIR:AT5G67230.1,TrEMBL:F6GZL7,TrEMBL:I1K9K2,TrEMBL:Q50HW4;Derives_from=GSCOCT00034434001;Name=Cc10_g08120;Ontology_term=CC_evidence_code:ISS,GO:0015018,GO:0016020,CC_EC_number:2.4.1.135,PRODUCT:Probable beta-1%2C4-xylosyltransferase IRX9H,CC_functional_completeness:complete,CC_gene:IRX9H,CC_gene:Os01g0675500,CC_gene:Os10g0205300;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034434001~ Probable beta-1%2C4-xylosyltransferase IRX9H~ IRX9H~ complete;original_location=complement(join(1818533..1819329%2C1817137..1817383%2C1816851..1817006));owner=coffea | |
| 41966 chr10 manual_curation exon 7244196 7245028 . + . Parent=GSCOCT00034434001 | |
| 41967 chr10 manual_curation exon 7243819 7244065 . + . Parent=GSCOCT00034434001 | |
| 41968 chr10 manual_curation exon 7241873 7242669 . + . Parent=GSCOCT00034434001 | |
| 41969 chr10 manual_curation CDS 7244196 7244351 . + 0 Parent=GSCOCT00034434001 | |
| 41970 chr10 manual_curation CDS 7243819 7244065 . + 2 Parent=GSCOCT00034434001 | |
| 41971 chr10 manual_curation CDS 7241873 7242669 . + 0 Parent=GSCOCT00034434001 | |
| 41972 chr10 manual_curation gene 7250104 7266949 . - . ID=GSCOCG00034433001;Name=Cc10_g08130 | |
| 41973 chr10 manual_curation mRNA 7250104 7266949 . - . ID=GSCOCT00034433001;Parent=GSCOCG00034433001;Name=Cc10_g08130 | |
| 41974 chr10 manual_curation polypeptide 7250682 7266949 . - . ID=GSCOCP00034433001;Dbxref=InterPro:IPR021850,InterPro:IPR022075,PFAM:PF11935,PFAM:PF12295,SwissProt:Q7ZYV9,SwissProt:Q80X82,SwissProt:Q92797,TAIR:AT1G27595.1,TAIR:AT5G01400.1,TrEMBL:B9R6Q7,TrEMBL:F6GZL6,TrEMBL:Q9SFZ8;Derives_from=GSCOCT00034433001;Name=Cc10_g08130;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:CONTAINS InterPro DOMAIN/s,CC_functional_completeness:complete,CC_gene:Sympk,CC_gene:SYMPK,CC_gene:sympk;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034433001~ CONTAINS InterPro DOMAIN/s: Symplekin tight junction protein C-terminal (InterPro:IPR022075)%3B BEST Arabidopsis thaliana protein match is: HEAT repeat-containing protein (TAIR:AT5G01400.1)%3B Has 593 Blast hits to 297 proteins in 111 species: Archae - 0%3B Bacteria - 3%3B Metazoa - 139%3B Fungi - 49%3B Plants - 57%3B Viruses - 0%3B Other Eukaryotes - 345 (source: NCBI BLink).~ Sympk~ complete;original_location=join(1794253..1794597%2C1796242..1796370%2C1796465..1797052%2C1797190..1797831%2C1798782..1798853%2C1800551..1800664%2C1800732..1800965%2C1801782..1801829%2C1802048..1802194%2C1803103..1803267%2C1803424..1803486%2C1804827..1804937%2C1805034..1805117%2C1805263..1805310%2C1805831..1805905%2C1807397..1807492%2C1807745..1807825%2C1807903..1807974%2C1809336..1809380%2C1809527..1809610%2C1809719..1809822%2C1810403..1810520);owner=coffea | |
| 41975 chr10 manual_curation exon 7266605 7266949 . - . Parent=GSCOCT00034433001 | |
| 41976 chr10 manual_curation exon 7264832 7264960 . - . Parent=GSCOCT00034433001 | |
| 41977 chr10 manual_curation exon 7264150 7264737 . - . Parent=GSCOCT00034433001 | |
| 41978 chr10 manual_curation exon 7263371 7264012 . - . Parent=GSCOCT00034433001 | |
| 41979 chr10 manual_curation exon 7262349 7262420 . - . Parent=GSCOCT00034433001 | |
| 41980 chr10 manual_curation exon 7260538 7260651 . - . Parent=GSCOCT00034433001 | |
| 41981 chr10 manual_curation exon 7260237 7260470 . - . Parent=GSCOCT00034433001 | |
| 41982 chr10 manual_curation exon 7259373 7259420 . - . Parent=GSCOCT00034433001 | |
| 41983 chr10 manual_curation exon 7259008 7259154 . - . Parent=GSCOCT00034433001 | |
| 41984 chr10 manual_curation exon 7257935 7258099 . - . Parent=GSCOCT00034433001 | |
| 41985 chr10 manual_curation exon 7257716 7257778 . - . Parent=GSCOCT00034433001 | |
| 41986 chr10 manual_curation exon 7256265 7256375 . - . Parent=GSCOCT00034433001 | |
| 41987 chr10 manual_curation exon 7256085 7256168 . - . Parent=GSCOCT00034433001 | |
| 41988 chr10 manual_curation exon 7255892 7255939 . - . Parent=GSCOCT00034433001 | |
| 41989 chr10 manual_curation exon 7255297 7255371 . - . Parent=GSCOCT00034433001 | |
| 41990 chr10 manual_curation exon 7253710 7253805 . - . Parent=GSCOCT00034433001 | |
| 41991 chr10 manual_curation exon 7253377 7253457 . - . Parent=GSCOCT00034433001 | |
| 41992 chr10 manual_curation exon 7253228 7253299 . - . Parent=GSCOCT00034433001 | |
| 41993 chr10 manual_curation exon 7251822 7251866 . - . Parent=GSCOCT00034433001 | |
| 41994 chr10 manual_curation exon 7251592 7251675 . - . Parent=GSCOCT00034433001 | |
| 41995 chr10 manual_curation exon 7251380 7251483 . - . Parent=GSCOCT00034433001 | |
| 41996 chr10 manual_curation exon 7250104 7250799 . - . Parent=GSCOCT00034433001 | |
| 41997 chr10 manual_curation CDS 7266605 7266949 . - 0 Parent=GSCOCT00034433001 | |
| 41998 chr10 manual_curation CDS 7264832 7264960 . - 0 Parent=GSCOCT00034433001 | |
| 41999 chr10 manual_curation CDS 7264150 7264737 . - 0 Parent=GSCOCT00034433001 | |
| 42000 chr10 manual_curation CDS 7263371 7264012 . - 0 Parent=GSCOCT00034433001 | |
| 42001 chr10 manual_curation CDS 7262349 7262420 . - 0 Parent=GSCOCT00034433001 | |
| 42002 chr10 manual_curation CDS 7260538 7260651 . - 0 Parent=GSCOCT00034433001 | |
| 42003 chr10 manual_curation CDS 7260237 7260470 . - 0 Parent=GSCOCT00034433001 | |
| 42004 chr10 manual_curation CDS 7259373 7259420 . - 0 Parent=GSCOCT00034433001 | |
| 42005 chr10 manual_curation CDS 7259008 7259154 . - 0 Parent=GSCOCT00034433001 | |
| 42006 chr10 manual_curation CDS 7257935 7258099 . - 0 Parent=GSCOCT00034433001 | |
| 42007 chr10 manual_curation CDS 7257716 7257778 . - 0 Parent=GSCOCT00034433001 | |
| 42008 chr10 manual_curation CDS 7256265 7256375 . - 0 Parent=GSCOCT00034433001 | |
| 42009 chr10 manual_curation CDS 7256085 7256168 . - 0 Parent=GSCOCT00034433001 | |
| 42010 chr10 manual_curation CDS 7255892 7255939 . - 0 Parent=GSCOCT00034433001 | |
| 42011 chr10 manual_curation CDS 7255297 7255371 . - 0 Parent=GSCOCT00034433001 | |
| 42012 chr10 manual_curation CDS 7253710 7253805 . - 0 Parent=GSCOCT00034433001 | |
| 42013 chr10 manual_curation CDS 7253377 7253457 . - 0 Parent=GSCOCT00034433001 | |
| 42014 chr10 manual_curation CDS 7253228 7253299 . - 0 Parent=GSCOCT00034433001 | |
| 42015 chr10 manual_curation CDS 7251822 7251866 . - 0 Parent=GSCOCT00034433001 | |
| 42016 chr10 manual_curation CDS 7251592 7251675 . - 0 Parent=GSCOCT00034433001 | |
| 42017 chr10 manual_curation CDS 7251380 7251483 . - 0 Parent=GSCOCT00034433001 | |
| 42018 chr10 manual_curation CDS 7250682 7250799 . - 2 Parent=GSCOCT00034433001 | |
| 42019 chr10 manual_curation gene 7270555 7277919 . - . ID=GSCOCG00034432001;Name=Cc10_g08140 | |
| 42020 chr10 manual_curation mRNA 7270555 7277919 . - . ID=GSCOCT00034432001;Parent=GSCOCG00034432001;Name=Cc10_g08140 | |
| 42021 chr10 manual_curation polypeptide 7270878 7277705 . - . ID=GSCOCP00034432001;Dbxref=InterPro:IPR021850,PFAM:PF11935,TAIR:AT1G27570.1,TAIR:AT1G27590.1,TAIR:AT5G01400.1,TrEMBL:A5BFZ4,TrEMBL:E0CNU0,TrEMBL:I1K9K4;Derives_from=GSCOCT00034432001;Name=Cc10_g08140;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:CONTAINS InterPro DOMAIN/s,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034432001~ CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3453 (InterPro:IPR021850)%3B BEST Arabidopsis thaliana protein match is: phosphatidylinositol 3- and 4-kinase family protein (TAIR:AT1G27570.1)%3B Has 109 Blast hits to 109 proteins in 38 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 65%3B Fungi - 4%3B Plants - 38%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(1783497..1783702%2C1785263..1785422%2C1786410..1786502%2C1788675..1788777%2C1788943..1789114%2C1790270..1790324);owner=coffea | |
| 42022 chr10 manual_curation exon 7277500 7277919 . - . Parent=GSCOCT00034432001 | |
| 42023 chr10 manual_curation exon 7275780 7275939 . - . Parent=GSCOCT00034432001 | |
| 42024 chr10 manual_curation exon 7274700 7274792 . - . Parent=GSCOCT00034432001 | |
| 42025 chr10 manual_curation exon 7272425 7272527 . - . Parent=GSCOCT00034432001 | |
| 42026 chr10 manual_curation exon 7272088 7272259 . - . Parent=GSCOCT00034432001 | |
| 42027 chr10 manual_curation exon 7270555 7270932 . - . Parent=GSCOCT00034432001 | |
| 42028 chr10 manual_curation CDS 7277500 7277705 . - 0 Parent=GSCOCT00034432001 | |
| 42029 chr10 manual_curation CDS 7275780 7275939 . - 2 Parent=GSCOCT00034432001 | |
| 42030 chr10 manual_curation CDS 7274700 7274792 . - 0 Parent=GSCOCT00034432001 | |
| 42031 chr10 manual_curation CDS 7272425 7272527 . - 0 Parent=GSCOCT00034432001 | |
| 42032 chr10 manual_curation CDS 7272088 7272259 . - 1 Parent=GSCOCT00034432001 | |
| 42033 chr10 manual_curation CDS 7270878 7270932 . - 2 Parent=GSCOCT00034432001 | |
| 42034 chr10 manual_curation gene 7290060 7292507 . + . ID=GSCOCG00034431001;Name=Cc10_g08150 | |
| 42035 chr10 manual_curation mRNA 7290060 7292507 . + . ID=GSCOCT00034431001;Parent=GSCOCG00034431001;Name=Cc10_g08150 | |
| 42036 chr10 manual_curation polypeptide 7290311 7292281 . + . ID=GSCOCP00034431001;Dbxref=InterPro:IPR014806,InterPro:IPR016135,PANTHER:PTHR12921,PFAM:PF08694,PIR:PIRSF008716,SUPERFAMILY:SSF54495,SwissProt:A2Z5S8,SwissProt:Q8S625,SwissProt:Q9SXC8,TAIR:AT1G27530.1,TrEMBL:A5BZY4,TrEMBL:A9PCY0,TrEMBL:B9R6Q6,TrEMBL:C6T5A5,TrEMBL:D7KBR2;Derives_from=GSCOCT00034431001;Name=Cc10_g08150;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Ubiquitin-fold modifier-conjugating enzyme 1,CC_functional_completeness:complete,CC_gene:At1g27530,CC_gene:Os10g0205200,CC_gene:OsI_33008;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034431001~ Ubiquitin-fold modifier-conjugating enzyme 1~ At1g27530~ complete;original_location=complement(join(1770559..1770891%2C1770406..1770467%2C1768921..1769050));owner=coffea | |
| 42037 chr10 manual_curation exon 7292152 7292507 . + . Parent=GSCOCT00034431001 | |
| 42038 chr10 manual_curation exon 7290735 7290796 . + . Parent=GSCOCT00034431001 | |
| 42039 chr10 manual_curation exon 7290060 7290643 . + . Parent=GSCOCT00034431001 | |
| 42040 chr10 manual_curation CDS 7292152 7292281 . + 2 Parent=GSCOCT00034431001 | |
| 42041 chr10 manual_curation CDS 7290735 7290796 . + 0 Parent=GSCOCT00034431001 | |
| 42042 chr10 manual_curation CDS 7290311 7290643 . + 0 Parent=GSCOCT00034431001 | |
| 42043 chr10 manual_curation gene 7294544 7297163 . - . ID=GSCOCG00034430001;Name=Cc10_g08160 | |
| 42044 chr10 manual_curation mRNA 7294544 7297163 . - . ID=GSCOCT00034430001;Parent=GSCOCG00034430001;Name=Cc10_g08160 | |
| 42045 chr10 manual_curation polypeptide 7294836 7297071 . - . ID=GSCOCP00034430001;Dbxref=GENE3D:G3DSA:3.40.449.10,GENE3D:G3DSA:3.90.228.20,HAMAP:MF_00453,InterPro:IPR001272,InterPro:IPR008210,InterPro:IPR013035,InterPro:IPR015994,PFAM:PF01293,PROSITE:PS00532,SUPERFAMILY:SSF68923,SwissProt:P49292,SwissProt:Q9SLZ0,TAIR:AT5G65690.1,TrEMBL:A2XEP1,TrEMBL:D7M9Z7;Derives_from=GSCOCT00034430001;Name=Cc10_g08160;Ontology_term=CC_evidence_code:ISS,GO:0004611,GO:0004612,GO:0005524,GO:0006094,GO:0017076,CC_EC_number:4.1.1.49,PRODUCT:Phosphoenolpyruvate carboxykinase [ATP],CC_functional_completeness:fragment,CC_gene:PCKA,CC_gene:PCK1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034430001~ Phosphoenolpyruvate carboxykinase [ATP]~ PCKA~ fragment;original_location=join(1764131..1764141%2C1764372..1764670%2C1764828..1765001%2C1765102..1765167%2C1765337..1765515%2C1765663..1765832%2C1765955..1766123%2C1766223..1766366);owner=coffea | |
| 42046 chr10 manual_curation exon 7297061 7297163 . - . Parent=GSCOCT00034430001 | |
| 42047 chr10 manual_curation exon 7296532 7296830 . - . Parent=GSCOCT00034430001 | |
| 42048 chr10 manual_curation exon 7296201 7296374 . - . Parent=GSCOCT00034430001 | |
| 42049 chr10 manual_curation exon 7296035 7296100 . - . Parent=GSCOCT00034430001 | |
| 42050 chr10 manual_curation exon 7295687 7295865 . - . Parent=GSCOCT00034430001 | |
| 42051 chr10 manual_curation exon 7295370 7295539 . - . Parent=GSCOCT00034430001 | |
| 42052 chr10 manual_curation exon 7295079 7295247 . - . Parent=GSCOCT00034430001 | |
| 42053 chr10 manual_curation exon 7294544 7294979 . - . Parent=GSCOCT00034430001 | |
| 42054 chr10 manual_curation CDS 7297061 7297071 . - 0 Parent=GSCOCT00034430001 | |
| 42055 chr10 manual_curation CDS 7296532 7296830 . - 2 Parent=GSCOCT00034430001 | |
| 42056 chr10 manual_curation CDS 7296201 7296374 . - 1 Parent=GSCOCT00034430001 | |
| 42057 chr10 manual_curation CDS 7296035 7296100 . - 1 Parent=GSCOCT00034430001 | |
| 42058 chr10 manual_curation CDS 7295687 7295865 . - 1 Parent=GSCOCT00034430001 | |
| 42059 chr10 manual_curation CDS 7295370 7295539 . - 0 Parent=GSCOCT00034430001 | |
| 42060 chr10 manual_curation CDS 7295079 7295247 . - 2 Parent=GSCOCT00034430001 | |
| 42061 chr10 manual_curation CDS 7294836 7294979 . - 0 Parent=GSCOCT00034430001 | |
| 42062 chr10 manual_curation gene 7324149 7327781 . + . ID=GSCOCG00034428001;Name=Cc10_g08170 | |
| 42063 chr10 manual_curation mRNA 7324149 7327781 . + . ID=GSCOCT00034428001;Parent=GSCOCG00034428001;Name=Cc10_g08170 | |
| 42064 chr10 manual_curation polypeptide 7324405 7327317 . + . ID=GSCOCP00034428001;Dbxref=GENE3D:G3DSA:3.40.50.720,HAMAP:MF_00087,InterPro:IPR000343,InterPro:IPR006151,InterPro:IPR015895,InterPro:IPR015896,InterPro:IPR016040,InterPro:IPR018214,PFAM:PF00745,PFAM:PF01488,PFAM:PF05201,PROSITE:PS00747,SUPERFAMILY:SSF69075,SUPERFAMILY:SSF69742,SwissProt:P42804,SwissProt:P49294,SwissProt:P93111,TAIR:AT1G09940.1,TAIR:AT1G58290.1,TAIR:AT2G31250.1,TIGRFAMs:TIGR01035,TrEMBL:A5BZY3,TrEMBL:A6Q0F0,TrEMBL:I1MB34;Derives_from=GSCOCT00034428001;Name=Cc10_g08170;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004764,GO:0005488,GO:0005737,GO:0008152,GO:0008883,GO:0033014,GO:0050661,GO:0055114,CC_EC_number:1.2.1.70,CC_EC_number:1.2.1.70,PRODUCT:Glutamyl-tRNA reductase 1%2C chloroplastic,CC_functional_completeness:complete,CC_gene:HEMA1,CC_gene:HEMA2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034428001~ Glutamyl-tRNA reductase 1%2C chloroplastic~ HEMA1~ complete;original_location=complement(join(1736455..1736797%2C1735484..1735725%2C1733885..1735015));owner=coffea | |
| 42065 chr10 manual_curation exon 7326187 7327781 . + . Parent=GSCOCT00034428001 | |
| 42066 chr10 manual_curation exon 7325477 7325718 . + . Parent=GSCOCT00034428001 | |
| 42067 chr10 manual_curation exon 7324149 7324747 . + . Parent=GSCOCT00034428001 | |
| 42068 chr10 manual_curation CDS 7326187 7327317 . + 0 Parent=GSCOCT00034428001 | |
| 42069 chr10 manual_curation CDS 7325477 7325718 . + 1 Parent=GSCOCT00034428001 | |
| 42070 chr10 manual_curation CDS 7324405 7324747 . + 0 Parent=GSCOCT00034428001 | |
| 42071 chr10 manual_curation gene 7332706 7336002 . - . ID=GSCOCG00034427001;Name=Cc10_g08180 | |
| 42072 chr10 manual_curation mRNA 7332706 7336002 . - . ID=GSCOCT00034427001;Parent=GSCOCG00034427001;Name=Cc10_g08180 | |
| 42073 chr10 manual_curation polypeptide 7333066 7335575 . - . ID=GSCOCP00034427001;Dbxref=InterPro:IPR001841,InterPro:IPR002035,InterPro:IPR018957,PFAM:PF00092,PFAM:PF00097,PROFILE:PS50089,PROFILE:PS50234,SMART:SM00184,SMART:SM00327,TAIR:AT2G22680.1,TAIR:AT5G49665.1,TAIR:AT5G65683.1,TrEMBL:A5BZY2,TrEMBL:B9R6Q1,TrEMBL:F6GZL4;Derives_from=GSCOCT00034427001;Name=Cc10_g08180;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Zinc finger (C3HC4-type RING finger) family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034427001~ Zinc finger (C3HC4-type RING finger) family protein~ unknown_gene~ complete;original_location=join(1725627..1726034%2C1726175..1726414%2C1726535..1727908%2C1727951..1728136);owner=coffea | |
| 42074 chr10 manual_curation exon 7335168 7336002 . - . Parent=GSCOCT00034427001 | |
| 42075 chr10 manual_curation exon 7334788 7335027 . - . Parent=GSCOCT00034427001 | |
| 42076 chr10 manual_curation exon 7333294 7334667 . - . Parent=GSCOCT00034427001 | |
| 42077 chr10 manual_curation exon 7332706 7333251 . - . Parent=GSCOCT00034427001 | |
| 42078 chr10 manual_curation CDS 7335168 7335575 . - 0 Parent=GSCOCT00034427001 | |
| 42079 chr10 manual_curation CDS 7334788 7335027 . - 0 Parent=GSCOCT00034427001 | |
| 42080 chr10 manual_curation CDS 7333294 7334667 . - 0 Parent=GSCOCT00034427001 | |
| 42081 chr10 manual_curation CDS 7333066 7333251 . - 0 Parent=GSCOCT00034427001 | |
| 42082 chr10 manual_curation gene 7359110 7364016 . - . ID=GSCOCG00034426001;Name=Cc10_g08190 | |
| 42083 chr10 manual_curation mRNA 7359110 7364016 . - . ID=GSCOCT00034426001;Parent=GSCOCG00034426001;Name=Cc10_g08190 | |
| 42084 chr10 manual_curation polypeptide 7359650 7362964 . - . ID=GSCOCP00034426001;Dbxref=InterPro:IPR003311,InterPro:IPR011525,PFAM:PF02309,PROFILE:PS50962,SwissProt:Q38826,SwissProt:Q38827,SwissProt:Q9ZSY8,TAIR:AT2G22670.4,TAIR:AT4G29080.1,TAIR:AT5G65670.1,TrEMBL:D9ZIM9,TrEMBL:E5L879,TrEMBL:G9JTT0;Derives_from=GSCOCT00034426001;Name=Cc10_g08190;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0045449,GO:0046983,CC_EC_number:missing_EC_number,PRODUCT:Auxin-responsive protein IAA9,CC_functional_completeness:complete,CC_gene:IAA9,CC_gene:IAA8,CC_gene:IAA27;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034426001~ Auxin-responsive protein IAA9~ IAA9~ complete;original_location=join(1698238..1698651%2C1698745..1698962%2C1699054..1699280%2C1699413..1699554%2C1700267..1700328%2C1701515..1701552);owner=coffea | |
| 42085 chr10 manual_curation exon 7362551 7364016 . - . Parent=GSCOCT00034426001 | |
| 42086 chr10 manual_curation exon 7362240 7362457 . - . Parent=GSCOCT00034426001 | |
| 42087 chr10 manual_curation exon 7361922 7362148 . - . Parent=GSCOCT00034426001 | |
| 42088 chr10 manual_curation exon 7361648 7361789 . - . Parent=GSCOCT00034426001 | |
| 42089 chr10 manual_curation exon 7360874 7360935 . - . Parent=GSCOCT00034426001 | |
| 42090 chr10 manual_curation exon 7359110 7359687 . - . Parent=GSCOCT00034426001 | |
| 42091 chr10 manual_curation CDS 7362551 7362964 . - 0 Parent=GSCOCT00034426001 | |
| 42092 chr10 manual_curation CDS 7362240 7362457 . - 0 Parent=GSCOCT00034426001 | |
| 42093 chr10 manual_curation CDS 7361922 7362148 . - 2 Parent=GSCOCT00034426001 | |
| 42094 chr10 manual_curation CDS 7361648 7361789 . - 1 Parent=GSCOCT00034426001 | |
| 42095 chr10 manual_curation CDS 7360874 7360935 . - 2 Parent=GSCOCT00034426001 | |
| 42096 chr10 manual_curation CDS 7359650 7359687 . - 1 Parent=GSCOCT00034426001 | |
| 42097 chr10 manual_curation gene 7385313 7387263 . - . ID=GSCOCG00034425001;Name=Cc10_g08200 | |
| 42098 chr10 manual_curation mRNA 7385313 7387263 . - . ID=GSCOCT00034425001;Parent=GSCOCG00034425001;Name=Cc10_g08200 | |
| 42099 chr10 manual_curation polypeptide 7385587 7387145 . - . ID=GSCOCP00034425001;Dbxref=GENE3D:G3DSA:4.10.280.10,InterPro:IPR001092,InterPro:IPR011598,PFAM:PF00010,PROFILE:PS50888,SMART:SM00353,SUPERFAMILY:SSF47459,SwissProt:Q9LPW3,SwissProt:Q9LSL1,SwissProt:Q9LXA9,TAIR:AT1G12860.1,TAIR:AT5G10570.1,TAIR:AT5G65640.1,TrEMBL:A9P9D2,TrEMBL:F6GZL0,TrEMBL:I0C079;Derives_from=GSCOCT00034425001;Name=Cc10_g08200;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0030528,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:BHLH93,CC_gene:BHLH61,CC_gene:SCRM2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034425001~ Putative uncharacterized protein~ BHLH93~ complete;original_location=join(1674057..1674192%2C1674319..1674695%2C1674886..1675053%2C1675163..1675330%2C1675529..1675615);owner=coffea | |
| 42100 chr10 manual_curation exon 7387010 7387263 . - . Parent=GSCOCT00034425001 | |
| 42101 chr10 manual_curation exon 7386507 7386883 . - . Parent=GSCOCT00034425001 | |
| 42102 chr10 manual_curation exon 7386149 7386316 . - . Parent=GSCOCT00034425001 | |
| 42103 chr10 manual_curation exon 7385872 7386039 . - . Parent=GSCOCT00034425001 | |
| 42104 chr10 manual_curation exon 7385313 7385673 . - . Parent=GSCOCT00034425001 | |
| 42105 chr10 manual_curation CDS 7387010 7387145 . - 0 Parent=GSCOCT00034425001 | |
| 42106 chr10 manual_curation CDS 7386507 7386883 . - 1 Parent=GSCOCT00034425001 | |
| 42107 chr10 manual_curation CDS 7386149 7386316 . - 0 Parent=GSCOCT00034425001 | |
| 42108 chr10 manual_curation CDS 7385872 7386039 . - 0 Parent=GSCOCT00034425001 | |
| 42109 chr10 manual_curation CDS 7385587 7385673 . - 0 Parent=GSCOCT00034425001 | |
| 42110 chr10 manual_curation gene 7423768 7428637 . + . ID=GSCOCG00034422001;Name=Cc10_g08210 | |
| 42111 chr10 manual_curation mRNA 7423768 7428637 . + . ID=GSCOCT00034422001;Parent=GSCOCG00034422001;Name=Cc10_g08210 | |
| 42112 chr10 manual_curation polypeptide 7424578 7428051 . + . ID=GSCOCP00034422001;Dbxref=InterPro:IPR013078,PFAM:PF00300,SMART:SM00855,TAIR:AT1G58280.2,TAIR:AT2G17280.1,TAIR:AT5G64460.2,TrEMBL:A5BDS3,TrEMBL:F6GZK9,TrEMBL:Q8LGT8;Derives_from=GSCOCT00034422001;Name=Cc10_g08210;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Phosphoglycerate mutase family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034422001~ Phosphoglycerate mutase family protein~ unknown_gene~ complete;original_location=complement(join(1636565..1636624%2C1636294..1636401%2C1635876..1635955%2C1635343..1635505%2C1634648..1634740%2C1634467..1634555%2C1634095..1634214%2C1633343..1633387%2C1633151..1633262));owner=coffea | |
| 42113 chr10 manual_curation exon 7423768 7423898 . + . Parent=GSCOCT00034422001 | |
| 42114 chr10 manual_curation exon 7427940 7428637 . + . Parent=GSCOCT00034422001 | |
| 42115 chr10 manual_curation exon 7427815 7427859 . + . Parent=GSCOCT00034422001 | |
| 42116 chr10 manual_curation exon 7426988 7427107 . + . Parent=GSCOCT00034422001 | |
| 42117 chr10 manual_curation exon 7426647 7426735 . + . Parent=GSCOCT00034422001 | |
| 42118 chr10 manual_curation exon 7426462 7426554 . + . Parent=GSCOCT00034422001 | |
| 42119 chr10 manual_curation exon 7425697 7425859 . + . Parent=GSCOCT00034422001 | |
| 42120 chr10 manual_curation exon 7425247 7425326 . + . Parent=GSCOCT00034422001 | |
| 42121 chr10 manual_curation exon 7424801 7424908 . + . Parent=GSCOCT00034422001 | |
| 42122 chr10 manual_curation exon 7424570 7424637 . + . Parent=GSCOCT00034422001 | |
| 42123 chr10 manual_curation CDS 7427940 7428051 . + 2 Parent=GSCOCT00034422001 | |
| 42124 chr10 manual_curation CDS 7427815 7427859 . + 2 Parent=GSCOCT00034422001 | |
| 42125 chr10 manual_curation CDS 7426988 7427107 . + 2 Parent=GSCOCT00034422001 | |
| 42126 chr10 manual_curation CDS 7426647 7426735 . + 0 Parent=GSCOCT00034422001 | |
| 42127 chr10 manual_curation CDS 7426462 7426554 . + 0 Parent=GSCOCT00034422001 | |
| 42128 chr10 manual_curation CDS 7425697 7425859 . + 2 Parent=GSCOCT00034422001 | |
| 42129 chr10 manual_curation CDS 7425247 7425326 . + 0 Parent=GSCOCT00034422001 | |
| 42130 chr10 manual_curation CDS 7424801 7424908 . + 0 Parent=GSCOCT00034422001 | |
| 42131 chr10 manual_curation CDS 7424578 7424637 . + 0 Parent=GSCOCT00034422001 | |
| 42132 chr10 manual_curation gene 7428741 7435391 . - . ID=GSCOCG00034421001;Name=Cc10_g08220 | |
| 42133 chr10 manual_curation mRNA 7428741 7435391 . - . ID=GSCOCT00034421001;Parent=GSCOCG00034421001;Name=Cc10_g08220 | |
| 42134 chr10 manual_curation polypeptide 7429053 7435254 . - . ID=GSCOCP00034421001;Dbxref=InterPro:IPR002085,PANTHER:PTHR11695,SwissProt:Q4PJX1,SwissProt:Q5R6E9,SwissProt:Q5SWX8,TAIR:AT3G28670.1,TrEMBL:B9SMX2,TrEMBL:I1JV20,TrEMBL:I1K9L3;Derives_from=GSCOCT00034421001;Name=Cc10_g08220;Ontology_term=CC_evidence_code:ISS,GO:0008270,GO:0016491,GO:0055114,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein odr-4 homolog,CC_functional_completeness:complete,CC_gene:Odr4,CC_gene:ODR4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034421001~ Putative Protein odr-4 homolog~ Odr4~ complete;original_location=join(1625948..1626247%2C1626890..1626985%2C1627413..1627501%2C1627586..1627714%2C1627952..1628072%2C1629739..1629823%2C1629943..1630052%2C1630535..1630686%2C1631428..1631524%2C1631841..1632149);owner=coffea | |
| 42135 chr10 manual_curation exon 7434955 7435391 . - . Parent=GSCOCT00034421001 | |
| 42136 chr10 manual_curation exon 7434217 7434312 . - . Parent=GSCOCT00034421001 | |
| 42137 chr10 manual_curation exon 7433701 7433789 . - . Parent=GSCOCT00034421001 | |
| 42138 chr10 manual_curation exon 7433488 7433616 . - . Parent=GSCOCT00034421001 | |
| 42139 chr10 manual_curation exon 7433130 7433250 . - . Parent=GSCOCT00034421001 | |
| 42140 chr10 manual_curation exon 7431379 7431463 . - . Parent=GSCOCT00034421001 | |
| 42141 chr10 manual_curation exon 7431150 7431259 . - . Parent=GSCOCT00034421001 | |
| 42142 chr10 manual_curation exon 7430516 7430667 . - . Parent=GSCOCT00034421001 | |
| 42143 chr10 manual_curation exon 7429678 7429774 . - . Parent=GSCOCT00034421001 | |
| 42144 chr10 manual_curation exon 7428741 7429361 . - . Parent=GSCOCT00034421001 | |
| 42145 chr10 manual_curation CDS 7434955 7435254 . - 0 Parent=GSCOCT00034421001 | |
| 42146 chr10 manual_curation CDS 7434217 7434312 . - 0 Parent=GSCOCT00034421001 | |
| 42147 chr10 manual_curation CDS 7433701 7433789 . - 0 Parent=GSCOCT00034421001 | |
| 42148 chr10 manual_curation CDS 7433488 7433616 . - 2 Parent=GSCOCT00034421001 | |
| 42149 chr10 manual_curation CDS 7433130 7433250 . - 2 Parent=GSCOCT00034421001 | |
| 42150 chr10 manual_curation CDS 7431379 7431463 . - 0 Parent=GSCOCT00034421001 | |
| 42151 chr10 manual_curation CDS 7431150 7431259 . - 1 Parent=GSCOCT00034421001 | |
| 42152 chr10 manual_curation CDS 7430516 7430667 . - 0 Parent=GSCOCT00034421001 | |
| 42153 chr10 manual_curation CDS 7429678 7429774 . - 2 Parent=GSCOCT00034421001 | |
| 42154 chr10 manual_curation CDS 7429053 7429361 . - 0 Parent=GSCOCT00034421001 | |
| 42155 chr10 manual_curation gene 7435939 7441862 . - . ID=GSCOCG00034420001;Name=Cc10_g08230 | |
| 42156 chr10 manual_curation mRNA 7435939 7441862 . - . ID=GSCOCT00034420001;Parent=GSCOCG00034420001;Name=Cc10_g08230 | |
| 42157 chr10 manual_curation polypeptide 7436608 7441553 . - . ID=GSCOCP00034420001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR004041,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR018451,InterPro:IPR020635,InterPro:IPR020636,InterPro:IPR020660,PANTHER:PTHR22982,PANTHER:PTHR22982:SF45,PFAM:PF00069,PFAM:PF03822,PROFILE:PS50011,PROFILE:PS50816,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q5JLD8,SwissProt:Q69Q47,SwissProt:Q9STV4,TAIR:AT1G30270.1,TAIR:AT4G24400.1,TAIR:AT5G35410.1,TrEMBL:B9SMX5,TrEMBL:F6GZK6,TrEMBL:Q53VM2;Derives_from=GSCOCT00034420001;Name=Cc10_g08230;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,GO:0007165,CC_EC_number:2.7.11.21,PRODUCT:CBL-interacting serine/threonine-protein kinase 8,CC_functional_completeness:complete,CC_gene:CIPK8,CC_gene:CIPK24;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034420001~ CBL-interacting serine/threonine-protein kinase 8~ CIPK8~ complete;original_location=join(1619649..1619807%2C1620639..1620690%2C1620767..1620777%2C1620816..1620887%2C1620995..1621102%2C1621192..1621266%2C1621351..1621404%2C1621536..1621661%2C1621872..1621961%2C1622466..1622588%2C1623324..1623443%2C1623611..1623727%2C1623887..1623943%2C1624017..1624091%2C1624493..1624594);owner=coffea | |
| 42158 chr10 manual_curation exon 7441395 7441862 . - . Parent=GSCOCT00034420001 | |
| 42159 chr10 manual_curation exon 7440512 7440563 . - . Parent=GSCOCT00034420001 | |
| 42160 chr10 manual_curation exon 7440425 7440435 . - . Parent=GSCOCT00034420001 | |
| 42161 chr10 manual_curation exon 7440315 7440386 . - . Parent=GSCOCT00034420001 | |
| 42162 chr10 manual_curation exon 7440100 7440207 . - . Parent=GSCOCT00034420001 | |
| 42163 chr10 manual_curation exon 7439936 7440010 . - . Parent=GSCOCT00034420001 | |
| 42164 chr10 manual_curation exon 7439798 7439851 . - . Parent=GSCOCT00034420001 | |
| 42165 chr10 manual_curation exon 7439541 7439666 . - . Parent=GSCOCT00034420001 | |
| 42166 chr10 manual_curation exon 7439241 7439330 . - . Parent=GSCOCT00034420001 | |
| 42167 chr10 manual_curation exon 7438614 7438736 . - . Parent=GSCOCT00034420001 | |
| 42168 chr10 manual_curation exon 7437759 7437878 . - . Parent=GSCOCT00034420001 | |
| 42169 chr10 manual_curation exon 7437475 7437591 . - . Parent=GSCOCT00034420001 | |
| 42170 chr10 manual_curation exon 7437259 7437315 . - . Parent=GSCOCT00034420001 | |
| 42171 chr10 manual_curation exon 7437111 7437185 . - . Parent=GSCOCT00034420001 | |
| 42172 chr10 manual_curation exon 7435939 7436709 . - . Parent=GSCOCT00034420001 | |
| 42173 chr10 manual_curation CDS 7441395 7441553 . - 0 Parent=GSCOCT00034420001 | |
| 42174 chr10 manual_curation CDS 7440512 7440563 . - 0 Parent=GSCOCT00034420001 | |
| 42175 chr10 manual_curation CDS 7440425 7440435 . - 1 Parent=GSCOCT00034420001 | |
| 42176 chr10 manual_curation CDS 7440315 7440386 . - 0 Parent=GSCOCT00034420001 | |
| 42177 chr10 manual_curation CDS 7440100 7440207 . - 0 Parent=GSCOCT00034420001 | |
| 42178 chr10 manual_curation CDS 7439936 7440010 . - 0 Parent=GSCOCT00034420001 | |
| 42179 chr10 manual_curation CDS 7439798 7439851 . - 0 Parent=GSCOCT00034420001 | |
| 42180 chr10 manual_curation CDS 7439541 7439666 . - 0 Parent=GSCOCT00034420001 | |
| 42181 chr10 manual_curation CDS 7439241 7439330 . - 0 Parent=GSCOCT00034420001 | |
| 42182 chr10 manual_curation CDS 7438614 7438736 . - 0 Parent=GSCOCT00034420001 | |
| 42183 chr10 manual_curation CDS 7437759 7437878 . - 0 Parent=GSCOCT00034420001 | |
| 42184 chr10 manual_curation CDS 7437475 7437591 . - 0 Parent=GSCOCT00034420001 | |
| 42185 chr10 manual_curation CDS 7437259 7437315 . - 0 Parent=GSCOCT00034420001 | |
| 42186 chr10 manual_curation CDS 7437111 7437185 . - 0 Parent=GSCOCT00034420001 | |
| 42187 chr10 manual_curation CDS 7436608 7436709 . - 0 Parent=GSCOCT00034420001 | |
| 42188 chr10 manual_curation gene 7464541 7466310 . - . ID=GSCOCG00034417001;Name=Cc10_g08240 | |
| 42189 chr10 manual_curation mRNA 7464541 7466310 . - . ID=GSCOCT00034417001;Parent=GSCOCG00034417001;Name=Cc10_g08240 | |
| 42190 chr10 manual_curation polypeptide 7464919 7466310 . - . ID=GSCOCP00034417001;Dbxref=InterPro:IPR000270,PFAM:PF00564,SMART:SM00666,TAIR:AT2G01190.1,TAIR:AT5G09620.1,TAIR:AT5G64430.1,TrEMBL:B9GJ10,TrEMBL:F6GZK7,TrEMBL:F6HW60;Derives_from=GSCOCT00034417001;Name=Cc10_g08240;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Octicosapeptide/Phox/Bem1p family protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034417001~ Putative Octicosapeptide/Phox/Bem1p family protein~ unknown_gene~ modules;original_location=1594892..1596283;owner=coffea | |
| 42191 chr10 manual_curation exon 7464541 7466310 . - . Parent=GSCOCT00034417001 | |
| 42192 chr10 manual_curation CDS 7464919 7466310 . - 0 Parent=GSCOCT00034417001 | |
| 42193 chr10 manual_curation gene 7468001 7468361 . - . ID=GSCOCG00034416001;Name=Cc10_g08250 | |
| 42194 chr10 manual_curation mRNA 7468001 7468361 . - . ID=GSCOCT00034416001;Parent=GSCOCG00034416001;Name=Cc10_g08250 | |
| 42195 chr10 manual_curation polypeptide 7468001 7468198 . - . ID=GSCOCP00034416001;Derives_from=GSCOCT00034416001;Name=Cc10_g08250;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034416001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1593004..1593201;owner=coffea | |
| 42196 chr10 manual_curation exon 7468001 7468361 . - . Parent=GSCOCT00034416001 | |
| 42197 chr10 manual_curation CDS 7468001 7468198 . - 0 Parent=GSCOCT00034416001 | |
| 42198 chr10 manual_curation gene 7549479 7554028 . + . ID=GSCOCG00034413001;Name=Cc10_g08260 | |
| 42199 chr10 manual_curation mRNA 7549479 7554028 . + . ID=GSCOCT00034413001;Parent=GSCOCG00034413001;Name=Cc10_g08260 | |
| 42200 chr10 manual_curation polypeptide 7549479 7554028 . + . ID=GSCOCP00034413001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:A3KPF8,SwissProt:Q3EDF8,SwissProt:Q9SR00,TAIR:AT1G09900.1,TAIR:AT1G79080.1,TAIR:AT3G04760.1,TIGRFAMs:TIGR00756,TrEMBL:A5C167,TrEMBL:D7KJV7,TrEMBL:F6GZK0;Derives_from=GSCOCT00034413001;Name=Cc10_g08260;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At1g09900,CC_functional_completeness:complete,CC_gene:At1g09900,CC_gene:At3g04760,CC_gene:At1g79080;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034413001~ Pentatricopeptide repeat-containing protein At1g09900~ At1g09900~ complete;original_location=complement(join(1510320..1511723%2C1509749..1509860%2C1507174..1507538));owner=coffea | |
| 42201 chr10 manual_curation exon 7553664 7554028 . + . Parent=GSCOCT00034413001 | |
| 42202 chr10 manual_curation exon 7551342 7551453 . + . Parent=GSCOCT00034413001 | |
| 42203 chr10 manual_curation exon 7549479 7550882 . + . Parent=GSCOCT00034413001 | |
| 42204 chr10 manual_curation CDS 7553664 7554028 . + 1 Parent=GSCOCT00034413001 | |
| 42205 chr10 manual_curation CDS 7551342 7551453 . + 0 Parent=GSCOCT00034413001 | |
| 42206 chr10 manual_curation CDS 7549479 7550882 . + 0 Parent=GSCOCT00034413001 | |
| 42207 chr10 manual_curation gene 7558720 7563221 . - . ID=GSCOCG00034412001;Name=Cc10_g08270 | |
| 42208 chr10 manual_curation mRNA 7558720 7563221 . - . ID=GSCOCT00034412001;Parent=GSCOCG00034412001;Name=Cc10_g08270 | |
| 42209 chr10 manual_curation polypeptide 7558720 7563221 . - . ID=GSCOCP00034412001;Dbxref=InterPro:IPR004648,InterPro:IPR004813,PFAM:PF03169,SwissProt:O04514,SwissProt:O82485,SwissProt:Q9FME8,TAIR:AT1G09930.1,TAIR:AT4G10770.1,TAIR:AT5G64410.1,TIGRFAMs:TIGR00727,TIGRFAMs:TIGR00728,TrEMBL:A7UQT0,TrEMBL:F6GZK1,TrEMBL:F6HW55;Derives_from=GSCOCT00034412001;Name=Cc10_g08270;Ontology_term=CC_evidence_code:ISS,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Oligopeptide transporter 4,CC_functional_completeness:complete,CC_gene:OPT4,CC_gene:OPT2,CC_gene:OPT7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034412001~ Oligopeptide transporter 4~ OPT4~ complete;original_location=join(1497981..1498520%2C1498658..1498758%2C1499550..1500113%2C1500447..1500699%2C1500936..1501118%2C1501865..1502482);owner=coffea | |
| 42210 chr10 manual_curation exon 7562682 7563221 . - . Parent=GSCOCT00034412001 | |
| 42211 chr10 manual_curation exon 7562444 7562544 . - . Parent=GSCOCT00034412001 | |
| 42212 chr10 manual_curation exon 7561089 7561652 . - . Parent=GSCOCT00034412001 | |
| 42213 chr10 manual_curation exon 7560503 7560755 . - . Parent=GSCOCT00034412001 | |
| 42214 chr10 manual_curation exon 7560084 7560266 . - . Parent=GSCOCT00034412001 | |
| 42215 chr10 manual_curation exon 7558720 7559337 . - . Parent=GSCOCT00034412001 | |
| 42216 chr10 manual_curation CDS 7562682 7563221 . - 0 Parent=GSCOCT00034412001 | |
| 42217 chr10 manual_curation CDS 7562444 7562544 . - 0 Parent=GSCOCT00034412001 | |
| 42218 chr10 manual_curation CDS 7561089 7561652 . - 2 Parent=GSCOCT00034412001 | |
| 42219 chr10 manual_curation CDS 7560503 7560755 . - 2 Parent=GSCOCT00034412001 | |
| 42220 chr10 manual_curation CDS 7560084 7560266 . - 0 Parent=GSCOCT00034412001 | |
| 42221 chr10 manual_curation CDS 7558720 7559337 . - 0 Parent=GSCOCT00034412001 | |
| 42222 chr10 manual_curation gene 7575885 7577090 . + . ID=GSCOCG00034411001;Name=Cc10_g08280 | |
| 42223 chr10 manual_curation mRNA 7575885 7577090 . + . ID=GSCOCT00034411001;Parent=GSCOCG00034411001;Name=Cc10_g08280 | |
| 42224 chr10 manual_curation polypeptide 7576818 7577090 . + . ID=GSCOCP00034411001;Derives_from=GSCOCT00034411001;Name=Cc10_g08280;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034411001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(1484112..1484384);owner=coffea | |
| 42225 chr10 manual_curation exon 7575885 7576074 . + . Parent=GSCOCT00034411001 | |
| 42226 chr10 manual_curation exon 7576322 7577090 . + . Parent=GSCOCT00034411001 | |
| 42227 chr10 manual_curation CDS 7576818 7577090 . + 0 Parent=GSCOCT00034411001 | |
| 42228 chr10 manual_curation gene 7583830 7585994 . - . ID=GSCOCG00034409001;Name=Cc10_g08290 | |
| 42229 chr10 manual_curation mRNA 7583830 7585994 . - . ID=GSCOCT00034409001;Parent=GSCOCG00034409001;Name=Cc10_g08290 | |
| 42230 chr10 manual_curation polypeptide 7584160 7585994 . - . ID=GSCOCP00034409001;Dbxref=InterPro:IPR002487,PFAM:PF01486,PROFILE:PS51297,SwissProt:A2RVQ5,SwissProt:Q38840,SwissProt:Q6EP49,TAIR:AT2G22630.1,TAIR:AT3G57230.1,TAIR:AT4G37940.1,TrEMBL:B9H6S3,TrEMBL:B9SMY1,TrEMBL:E0CNS3;Derives_from=GSCOCT00034409001;Name=Cc10_g08290;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0005634,CC_EC_number:missing_EC_number,PRODUCT:Agamous-like MADS-box protein AGL16,CC_functional_completeness:fragment,CC_gene:AGL16,CC_gene:MADS27,CC_gene:AGL17;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034409001~ Agamous-like MADS-box protein AGL16~ AGL16~ fragment;original_location=join(1475208..1475248%2C1476376..1476475%2C1476585..1476626%2C1476710..1476793%2C1476887..1477042);owner=coffea | |
| 42231 chr10 manual_curation exon 7585954 7585994 . - . Parent=GSCOCT00034409001 | |
| 42232 chr10 manual_curation exon 7584727 7584826 . - . Parent=GSCOCT00034409001 | |
| 42233 chr10 manual_curation exon 7584576 7584617 . - . Parent=GSCOCT00034409001 | |
| 42234 chr10 manual_curation exon 7584409 7584492 . - . Parent=GSCOCT00034409001 | |
| 42235 chr10 manual_curation exon 7583830 7584315 . - . Parent=GSCOCT00034409001 | |
| 42236 chr10 manual_curation CDS 7585954 7585994 . - 0 Parent=GSCOCT00034409001 | |
| 42237 chr10 manual_curation CDS 7584727 7584826 . - 2 Parent=GSCOCT00034409001 | |
| 42238 chr10 manual_curation CDS 7584576 7584617 . - 0 Parent=GSCOCT00034409001 | |
| 42239 chr10 manual_curation CDS 7584409 7584492 . - 0 Parent=GSCOCT00034409001 | |
| 42240 chr10 manual_curation CDS 7584160 7584315 . - 0 Parent=GSCOCT00034409001 | |
| 42241 chr10 manual_curation gene 7604879 7605379 . - . ID=GSCOCG00034405001;Name=Cc10_g08300 | |
| 42242 chr10 manual_curation mRNA 7604879 7605379 . - . ID=GSCOCT00034405001;Parent=GSCOCG00034405001;Name=Cc10_g08300 | |
| 42243 chr10 manual_curation polypeptide 7604879 7605079 . - . ID=GSCOCP00034405001;Dbxref=InterPro:IPR002100,PFAM:PF00319,PRINTS:PR00404,PROFILE:PS50066,PROSITE:PS00350,SMART:SM00432,SUPERFAMILY:SSF55455,SwissProt:Q40702,SwissProt:Q6EP49,SwissProt:Q6VAM4,SwissProt:Q8VWM8,SwissProt:Q9SI38,SwissProt:Q9SZJ6,TAIR:AT2G14210.1,TAIR:AT4G37940.1,TrEMBL:B9FFJ7;Derives_from=GSCOCT00034405001;Name=Cc10_g08300;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0005634,GO:0043565,CC_EC_number:missing_EC_number,PRODUCT:MADS-box transcription factor ANR1,CC_functional_completeness:fragment,CC_gene:AGL16,CC_gene:ANR1,CC_gene:MADS57,CC_gene:MADS27,CC_gene:AGL21,CC_gene:MADS23,CC_gene:MADS2,CC_gene:M17;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034405001~ MADS-box transcription factor ANR1~ AGL16~ fragment;original_location=1456123..1456323;owner=coffea | |
| 42244 chr10 manual_curation exon 7604879 7605379 . - . Parent=GSCOCT00034405001 | |
| 42245 chr10 manual_curation CDS 7604879 7605079 . - 0 Parent=GSCOCT00034405001 | |
| 42246 chr10 manual_curation gene 7622243 7626136 . + . ID=GSCOCG00034404001;Name=Cc10_g08310 | |
| 42247 chr10 manual_curation mRNA 7622243 7626136 . + . ID=GSCOCT00034404001;Parent=GSCOCG00034404001;Name=Cc10_g08310 | |
| 42248 chr10 manual_curation polypeptide 7622640 7625846 . + . ID=GSCOCP00034404001;Dbxref=InterPro:IPR008974,SUPERFAMILY:SSF49599,SwissProt:Q3UDK1,SwissProt:Q6GPH4,SwissProt:Q99MM4,TAIR:AT1G09920.1,TAIR:AT4G15420.1,TrEMBL:B9GN75,TrEMBL:B9SMY2,TrEMBL:I1JH23;Derives_from=GSCOCT00034404001;Name=Cc10_g08310;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:TRAF-type zinc finger-related,CC_functional_completeness:complete,CC_gene:XAF1,CC_gene:Trafd1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034404001~ TRAF-type zinc finger-related~ XAF1~ complete;original_location=complement(join(1438519..1438562%2C1437283..1437418%2C1436142..1436279%2C1435895..1436016%2C1435356..1435515));owner=coffea | |
| 42249 chr10 manual_curation exon 7622243 7622422 . + . Parent=GSCOCT00034404001 | |
| 42250 chr10 manual_curation exon 7625687 7626136 . + . Parent=GSCOCT00034404001 | |
| 42251 chr10 manual_curation exon 7625186 7625307 . + . Parent=GSCOCT00034404001 | |
| 42252 chr10 manual_curation exon 7624923 7625060 . + . Parent=GSCOCT00034404001 | |
| 42253 chr10 manual_curation exon 7623784 7623919 . + . Parent=GSCOCT00034404001 | |
| 42254 chr10 manual_curation exon 7622575 7622683 . + . Parent=GSCOCT00034404001 | |
| 42255 chr10 manual_curation CDS 7625687 7625846 . + 2 Parent=GSCOCT00034404001 | |
| 42256 chr10 manual_curation CDS 7625186 7625307 . + 0 Parent=GSCOCT00034404001 | |
| 42257 chr10 manual_curation CDS 7624923 7625060 . + 0 Parent=GSCOCT00034404001 | |
| 42258 chr10 manual_curation CDS 7623784 7623919 . + 2 Parent=GSCOCT00034404001 | |
| 42259 chr10 manual_curation CDS 7622640 7622683 . + 0 Parent=GSCOCT00034404001 | |
| 42260 chr10 manual_curation gene 7630046 7635496 . + . ID=GSCOCG00034402001;Name=Cc10_g08320 | |
| 42261 chr10 manual_curation mRNA 7630046 7635496 . + . ID=GSCOCT00034402001;Parent=GSCOCG00034402001;Name=Cc10_g08320 | |
| 42262 chr10 manual_curation polypeptide 7630225 7635206 . + . ID=GSCOCP00034402001;Dbxref=InterPro:IPR008979,InterPro:IPR010325,InterPro:IPR013784,PFAM:PF06045,SUPERFAMILY:SSF49452,SUPERFAMILY:SSF49785,SwissProt:A5ABH4,SwissProt:Q5AZ85,SwissProt:Q8RJP2,TAIR:AT1G09890.1,TAIR:AT1G09910.1,TAIR:AT4G24430.1,TrEMBL:B9SMY4,TrEMBL:F6GZJ7,TrEMBL:G7J4L9;Derives_from=GSCOCT00034402001;Name=Cc10_g08320;Ontology_term=CC_evidence_code:ISS,GO:0030246,CC_EC_number:missing_EC_number,PRODUCT:Putative Rhamnogalacturonate lyase,CC_functional_completeness:complete,CC_gene:rhiE,CC_gene:rglB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034402001~ Putative Rhamnogalacturonate lyase~ rhiE~ complete;original_location=complement(join(1430936..1430977%2C1430206..1430327%2C1429927..1429986%2C1429717..1429836%2C1429503..1429628%2C1428878..1429019%2C1428433..1428603%2C1428169..1428324%2C1427962..1428068%2C1427744..1427834%2C1427253..1427394%2C1427016..1427172%2C1426713..1426829%2C1426315..1426441%2C1425996..1426232));owner=coffea | |
| 42263 chr10 manual_curation exon 7630046 7630087 . + . Parent=GSCOCT00034402001 | |
| 42264 chr10 manual_curation exon 7634970 7635496 . + . Parent=GSCOCT00034402001 | |
| 42265 chr10 manual_curation exon 7634761 7634887 . + . Parent=GSCOCT00034402001 | |
| 42266 chr10 manual_curation exon 7634373 7634489 . + . Parent=GSCOCT00034402001 | |
| 42267 chr10 manual_curation exon 7634030 7634186 . + . Parent=GSCOCT00034402001 | |
| 42268 chr10 manual_curation exon 7633808 7633949 . + . Parent=GSCOCT00034402001 | |
| 42269 chr10 manual_curation exon 7633368 7633458 . + . Parent=GSCOCT00034402001 | |
| 42270 chr10 manual_curation exon 7633134 7633240 . + . Parent=GSCOCT00034402001 | |
| 42271 chr10 manual_curation exon 7632878 7633033 . + . Parent=GSCOCT00034402001 | |
| 42272 chr10 manual_curation exon 7632599 7632769 . + . Parent=GSCOCT00034402001 | |
| 42273 chr10 manual_curation exon 7632183 7632324 . + . Parent=GSCOCT00034402001 | |
| 42274 chr10 manual_curation exon 7631574 7631699 . + . Parent=GSCOCT00034402001 | |
| 42275 chr10 manual_curation exon 7631366 7631485 . + . Parent=GSCOCT00034402001 | |
| 42276 chr10 manual_curation exon 7631216 7631275 . + . Parent=GSCOCT00034402001 | |
| 42277 chr10 manual_curation exon 7630875 7630996 . + . Parent=GSCOCT00034402001 | |
| 42278 chr10 manual_curation exon 7630193 7630266 . + . Parent=GSCOCT00034402001 | |
| 42279 chr10 manual_curation CDS 7634970 7635206 . + 0 Parent=GSCOCT00034402001 | |
| 42280 chr10 manual_curation CDS 7634761 7634887 . + 2 Parent=GSCOCT00034402001 | |
| 42281 chr10 manual_curation CDS 7634373 7634489 . + 2 Parent=GSCOCT00034402001 | |
| 42282 chr10 manual_curation CDS 7634030 7634186 . + 1 Parent=GSCOCT00034402001 | |
| 42283 chr10 manual_curation CDS 7633808 7633949 . + 0 Parent=GSCOCT00034402001 | |
| 42284 chr10 manual_curation CDS 7633368 7633458 . + 2 Parent=GSCOCT00034402001 | |
| 42285 chr10 manual_curation CDS 7633134 7633240 . + 0 Parent=GSCOCT00034402001 | |
| 42286 chr10 manual_curation CDS 7632878 7633033 . + 0 Parent=GSCOCT00034402001 | |
| 42287 chr10 manual_curation CDS 7632599 7632769 . + 0 Parent=GSCOCT00034402001 | |
| 42288 chr10 manual_curation CDS 7632183 7632324 . + 2 Parent=GSCOCT00034402001 | |
| 42289 chr10 manual_curation CDS 7631574 7631699 . + 2 Parent=GSCOCT00034402001 | |
| 42290 chr10 manual_curation CDS 7631366 7631485 . + 2 Parent=GSCOCT00034402001 | |
| 42291 chr10 manual_curation CDS 7631216 7631275 . + 2 Parent=GSCOCT00034402001 | |
| 42292 chr10 manual_curation CDS 7630875 7630996 . + 0 Parent=GSCOCT00034402001 | |
| 42293 chr10 manual_curation CDS 7630225 7630266 . + 0 Parent=GSCOCT00034402001 | |
| 42294 chr10 manual_curation gene 7637196 7642551 . + . ID=GSCOCG00034401001;Name=Cc10_g08330 | |
| 42295 chr10 manual_curation mRNA 7637196 7642551 . + . ID=GSCOCT00034401001;Parent=GSCOCG00034401001;Name=Cc10_g08330 | |
| 42296 chr10 manual_curation polypeptide 7637196 7642551 . + . ID=GSCOCP00034401001;Dbxref=InterPro:IPR008979,InterPro:IPR010325,InterPro:IPR011013,PFAM:PF06045,SUPERFAMILY:SSF49785,SUPERFAMILY:SSF74650,TAIR:AT1G09890.1,TAIR:AT1G09910.1,TAIR:AT4G24430.1,TrEMBL:B9SMY4,TrEMBL:G7J4L9,TrEMBL:I1K9M3;Derives_from=GSCOCT00034401001;Name=Cc10_g08330;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0030246,CC_EC_number:missing_EC_number,PRODUCT:Rhamnogalacturonate lyase family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034401001~ Rhamnogalacturonate lyase family protein~ unknown_gene~ complete;original_location=complement(join(1423965..1424006%2C1423431..1423557%2C1423145..1423205%2C1422972..1423091%2C1422765..1422884%2C1422450..1422591%2C1421950..1422120%2C1421513..1421668%2C1421161..1421267%2C1420328..1420418%2C1420155..1420215%2C1419471..1419554%2C1419222..1419378%2C1418651..1418771));owner=coffea | |
| 42297 chr10 manual_curation exon 7642431 7642551 . + . Parent=GSCOCT00034401001 | |
| 42298 chr10 manual_curation exon 7641824 7641980 . + . Parent=GSCOCT00034401001 | |
| 42299 chr10 manual_curation exon 7641648 7641731 . + . Parent=GSCOCT00034401001 | |
| 42300 chr10 manual_curation exon 7640987 7641047 . + . Parent=GSCOCT00034401001 | |
| 42301 chr10 manual_curation exon 7640784 7640874 . + . Parent=GSCOCT00034401001 | |
| 42302 chr10 manual_curation exon 7639935 7640041 . + . Parent=GSCOCT00034401001 | |
| 42303 chr10 manual_curation exon 7639534 7639689 . + . Parent=GSCOCT00034401001 | |
| 42304 chr10 manual_curation exon 7639082 7639252 . + . Parent=GSCOCT00034401001 | |
| 42305 chr10 manual_curation exon 7638611 7638752 . + . Parent=GSCOCT00034401001 | |
| 42306 chr10 manual_curation exon 7638318 7638437 . + . Parent=GSCOCT00034401001 | |
| 42307 chr10 manual_curation exon 7638111 7638230 . + . Parent=GSCOCT00034401001 | |
| 42308 chr10 manual_curation exon 7637997 7638057 . + . Parent=GSCOCT00034401001 | |
| 42309 chr10 manual_curation exon 7637645 7637771 . + . Parent=GSCOCT00034401001 | |
| 42310 chr10 manual_curation exon 7637196 7637237 . + . Parent=GSCOCT00034401001 | |
| 42311 chr10 manual_curation CDS 7642431 7642551 . + 2 Parent=GSCOCT00034401001 | |
| 42312 chr10 manual_curation CDS 7641824 7641980 . + 1 Parent=GSCOCT00034401001 | |
| 42313 chr10 manual_curation CDS 7641648 7641731 . + 1 Parent=GSCOCT00034401001 | |
| 42314 chr10 manual_curation CDS 7640987 7641047 . + 0 Parent=GSCOCT00034401001 | |
| 42315 chr10 manual_curation CDS 7640784 7640874 . + 2 Parent=GSCOCT00034401001 | |
| 42316 chr10 manual_curation CDS 7639935 7640041 . + 0 Parent=GSCOCT00034401001 | |
| 42317 chr10 manual_curation CDS 7639534 7639689 . + 0 Parent=GSCOCT00034401001 | |
| 42318 chr10 manual_curation CDS 7639082 7639252 . + 0 Parent=GSCOCT00034401001 | |
| 42319 chr10 manual_curation CDS 7638611 7638752 . + 2 Parent=GSCOCT00034401001 | |
| 42320 chr10 manual_curation CDS 7638318 7638437 . + 2 Parent=GSCOCT00034401001 | |
| 42321 chr10 manual_curation CDS 7638111 7638230 . + 2 Parent=GSCOCT00034401001 | |
| 42322 chr10 manual_curation CDS 7637997 7638057 . + 1 Parent=GSCOCT00034401001 | |
| 42323 chr10 manual_curation CDS 7637645 7637771 . + 0 Parent=GSCOCT00034401001 | |
| 42324 chr10 manual_curation CDS 7637196 7637237 . + 0 Parent=GSCOCT00034401001 | |
| 42325 chr10 manual_curation gene 7648026 7652878 . + . ID=GSCOCG00034400001;Name=Cc10_g08340 | |
| 42326 chr10 manual_curation mRNA 7648026 7652878 . + . ID=GSCOCT00034400001;Parent=GSCOCG00034400001;Name=Cc10_g08340 | |
| 42327 chr10 manual_curation polypeptide 7648026 7652878 . + . ID=GSCOCP00034400001;Dbxref=InterPro:IPR008979,InterPro:IPR010325,InterPro:IPR013784,PFAM:PF06045,SUPERFAMILY:SSF49452,SUPERFAMILY:SSF49785,SwissProt:A5ABH4,SwissProt:Q5AZ85,SwissProt:Q8RJP2,TAIR:AT1G09890.1,TAIR:AT1G09910.1,TAIR:AT4G24430.1,TrEMBL:B9SMY4,TrEMBL:I1JV26,TrEMBL:I1K9M3;Derives_from=GSCOCT00034400001;Name=Cc10_g08340;Ontology_term=CC_evidence_code:ISS,GO:0030246,CC_EC_number:missing_EC_number,PRODUCT:Putative Rhamnogalacturonate lyase,CC_functional_completeness:complete,CC_gene:rhiE,CC_gene:rglB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034400001~ Putative Rhamnogalacturonate lyase~ rhiE~ complete;original_location=complement(join(1413009..1413176%2C1412786..1412907%2C1412497..1412556%2C1411908..1412027%2C1411692..1411811%2C1411288..1411429%2C1411034..1411204%2C1410463..1410618%2C1410282..1410388%2C1409963..1410053%2C1409711..1409852%2C1409478..1409634%2C1409134..1409250%2C1408720..1408846%2C1408324..1408569));owner=coffea | |
| 42328 chr10 manual_curation exon 7652633 7652878 . + . Parent=GSCOCT00034400001 | |
| 42329 chr10 manual_curation exon 7652356 7652482 . + . Parent=GSCOCT00034400001 | |
| 42330 chr10 manual_curation exon 7651952 7652068 . + . Parent=GSCOCT00034400001 | |
| 42331 chr10 manual_curation exon 7651568 7651724 . + . Parent=GSCOCT00034400001 | |
| 42332 chr10 manual_curation exon 7651350 7651491 . + . Parent=GSCOCT00034400001 | |
| 42333 chr10 manual_curation exon 7651149 7651239 . + . Parent=GSCOCT00034400001 | |
| 42334 chr10 manual_curation exon 7650814 7650920 . + . Parent=GSCOCT00034400001 | |
| 42335 chr10 manual_curation exon 7650584 7650739 . + . Parent=GSCOCT00034400001 | |
| 42336 chr10 manual_curation exon 7649998 7650168 . + . Parent=GSCOCT00034400001 | |
| 42337 chr10 manual_curation exon 7649773 7649914 . + . Parent=GSCOCT00034400001 | |
| 42338 chr10 manual_curation exon 7649391 7649510 . + . Parent=GSCOCT00034400001 | |
| 42339 chr10 manual_curation exon 7649175 7649294 . + . Parent=GSCOCT00034400001 | |
| 42340 chr10 manual_curation exon 7648646 7648705 . + . Parent=GSCOCT00034400001 | |
| 42341 chr10 manual_curation exon 7648295 7648416 . + . Parent=GSCOCT00034400001 | |
| 42342 chr10 manual_curation exon 7648026 7648193 . + . Parent=GSCOCT00034400001 | |
| 42343 chr10 manual_curation CDS 7652633 7652878 . + 0 Parent=GSCOCT00034400001 | |
| 42344 chr10 manual_curation CDS 7652356 7652482 . + 2 Parent=GSCOCT00034400001 | |
| 42345 chr10 manual_curation CDS 7651952 7652068 . + 2 Parent=GSCOCT00034400001 | |
| 42346 chr10 manual_curation CDS 7651568 7651724 . + 1 Parent=GSCOCT00034400001 | |
| 42347 chr10 manual_curation CDS 7651350 7651491 . + 0 Parent=GSCOCT00034400001 | |
| 42348 chr10 manual_curation CDS 7651149 7651239 . + 2 Parent=GSCOCT00034400001 | |
| 42349 chr10 manual_curation CDS 7650814 7650920 . + 0 Parent=GSCOCT00034400001 | |
| 42350 chr10 manual_curation CDS 7650584 7650739 . + 0 Parent=GSCOCT00034400001 | |
| 42351 chr10 manual_curation CDS 7649998 7650168 . + 0 Parent=GSCOCT00034400001 | |
| 42352 chr10 manual_curation CDS 7649773 7649914 . + 2 Parent=GSCOCT00034400001 | |
| 42353 chr10 manual_curation CDS 7649391 7649510 . + 2 Parent=GSCOCT00034400001 | |
| 42354 chr10 manual_curation CDS 7649175 7649294 . + 2 Parent=GSCOCT00034400001 | |
| 42355 chr10 manual_curation CDS 7648646 7648705 . + 2 Parent=GSCOCT00034400001 | |
| 42356 chr10 manual_curation CDS 7648295 7648416 . + 0 Parent=GSCOCT00034400001 | |
| 42357 chr10 manual_curation CDS 7648026 7648193 . + 0 Parent=GSCOCT00034400001 | |
| 42358 chr10 manual_curation gene 7655421 7660132 . + . ID=GSCOCG00034398001;Name=Cc10_g08350 | |
| 42359 chr10 manual_curation mRNA 7655421 7660132 . + . ID=GSCOCT00034398001;Parent=GSCOCG00034398001;Name=Cc10_g08350 | |
| 42360 chr10 manual_curation polypeptide 7655588 7659979 . + . ID=GSCOCP00034398001;Dbxref=InterPro:IPR008979,InterPro:IPR010325,InterPro:IPR013784,PFAM:PF06045,SUPERFAMILY:SSF49452,SUPERFAMILY:SSF49785,SwissProt:A5ABH4,SwissProt:Q5AZ85,SwissProt:Q8RJP2,TAIR:AT1G09890.1,TAIR:AT1G09910.1,TAIR:AT4G24430.1,TrEMBL:B9SMY4,TrEMBL:F6GZJ7,TrEMBL:I1K9M3;Derives_from=GSCOCT00034398001;Name=Cc10_g08350;Ontology_term=CC_evidence_code:ISS,GO:0030246,CC_EC_number:missing_EC_number,PRODUCT:Putative Rhamnogalacturonate lyase,CC_functional_completeness:complete,CC_gene:rhiE,CC_gene:rglB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034398001~ Putative Rhamnogalacturonate lyase~ rhiE~ complete;original_location=complement(join(1405576..1405614%2C1404713..1404834%2C1404557..1404616%2C1404233..1404352%2C1404040..1404159%2C1403574..1403715%2C1403247..1403417%2C1403000..1403155%2C1402804..1402910%2C1402560..1402650%2C1402338..1402479%2C1402064..1402223%2C1401816..1401932%2C1401581..1401707%2C1401223..1401477));owner=coffea | |
| 42361 chr10 manual_curation exon 7659725 7660132 . + . Parent=GSCOCT00034398001 | |
| 42362 chr10 manual_curation exon 7659495 7659621 . + . Parent=GSCOCT00034398001 | |
| 42363 chr10 manual_curation exon 7659270 7659386 . + . Parent=GSCOCT00034398001 | |
| 42364 chr10 manual_curation exon 7658979 7659138 . + . Parent=GSCOCT00034398001 | |
| 42365 chr10 manual_curation exon 7658723 7658864 . + . Parent=GSCOCT00034398001 | |
| 42366 chr10 manual_curation exon 7658552 7658642 . + . Parent=GSCOCT00034398001 | |
| 42367 chr10 manual_curation exon 7658292 7658398 . + . Parent=GSCOCT00034398001 | |
| 42368 chr10 manual_curation exon 7658047 7658202 . + . Parent=GSCOCT00034398001 | |
| 42369 chr10 manual_curation exon 7657785 7657955 . + . Parent=GSCOCT00034398001 | |
| 42370 chr10 manual_curation exon 7657487 7657628 . + . Parent=GSCOCT00034398001 | |
| 42371 chr10 manual_curation exon 7657043 7657162 . + . Parent=GSCOCT00034398001 | |
| 42372 chr10 manual_curation exon 7656850 7656969 . + . Parent=GSCOCT00034398001 | |
| 42373 chr10 manual_curation exon 7656586 7656645 . + . Parent=GSCOCT00034398001 | |
| 42374 chr10 manual_curation exon 7656368 7656489 . + . Parent=GSCOCT00034398001 | |
| 42375 chr10 manual_curation exon 7655421 7655626 . + . Parent=GSCOCT00034398001 | |
| 42376 chr10 manual_curation CDS 7659725 7659979 . + 0 Parent=GSCOCT00034398001 | |
| 42377 chr10 manual_curation CDS 7659495 7659621 . + 2 Parent=GSCOCT00034398001 | |
| 42378 chr10 manual_curation CDS 7659270 7659386 . + 2 Parent=GSCOCT00034398001 | |
| 42379 chr10 manual_curation CDS 7658979 7659138 . + 1 Parent=GSCOCT00034398001 | |
| 42380 chr10 manual_curation CDS 7658723 7658864 . + 0 Parent=GSCOCT00034398001 | |
| 42381 chr10 manual_curation CDS 7658552 7658642 . + 2 Parent=GSCOCT00034398001 | |
| 42382 chr10 manual_curation CDS 7658292 7658398 . + 0 Parent=GSCOCT00034398001 | |
| 42383 chr10 manual_curation CDS 7658047 7658202 . + 0 Parent=GSCOCT00034398001 | |
| 42384 chr10 manual_curation CDS 7657785 7657955 . + 0 Parent=GSCOCT00034398001 | |
| 42385 chr10 manual_curation CDS 7657487 7657628 . + 2 Parent=GSCOCT00034398001 | |
| 42386 chr10 manual_curation CDS 7657043 7657162 . + 2 Parent=GSCOCT00034398001 | |
| 42387 chr10 manual_curation CDS 7656850 7656969 . + 2 Parent=GSCOCT00034398001 | |
| 42388 chr10 manual_curation CDS 7656586 7656645 . + 2 Parent=GSCOCT00034398001 | |
| 42389 chr10 manual_curation CDS 7656368 7656489 . + 0 Parent=GSCOCT00034398001 | |
| 42390 chr10 manual_curation CDS 7655588 7655626 . + 0 Parent=GSCOCT00034398001 | |
| 42391 chr10 manual_curation gene 7660245 7660717 . - . ID=GSCOCG00034397001;Name=Cc10_g08360 | |
| 42392 chr10 manual_curation mRNA 7660245 7660717 . - . ID=GSCOCT00034397001;Parent=GSCOCG00034397001;Name=Cc10_g08360 | |
| 42393 chr10 manual_curation polypeptide 7660245 7660630 . - . ID=GSCOCP00034397001;Dbxref=TAIR:AT2G38465.1,TrEMBL:C6TC54,TrEMBL:E0CNR9,TrEMBL:I1JH20;Derives_from=GSCOCT00034397001;Name=Cc10_g08360;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034397001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 11 growth stages%3B Has 16 Blast hits to 16 proteins in 8 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 16%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ modules;original_location=join(1400572..1400730%2C1400832..1400957);owner=coffea | |
| 42394 chr10 manual_curation exon 7660472 7660717 . - . Parent=GSCOCT00034397001 | |
| 42395 chr10 manual_curation exon 7660245 7660370 . - . Parent=GSCOCT00034397001 | |
| 42396 chr10 manual_curation CDS 7660472 7660630 . - 0 Parent=GSCOCT00034397001 | |
| 42397 chr10 manual_curation CDS 7660245 7660370 . - 0 Parent=GSCOCT00034397001 | |
| 42398 chr10 manual_curation gene 7662024 7666243 . + . ID=GSCOCG00034396001;Name=Cc10_g08370 | |
| 42399 chr10 manual_curation mRNA 7662024 7666243 . + . ID=GSCOCT00034396001;Parent=GSCOCG00034396001;Name=Cc10_g08370 | |
| 42400 chr10 manual_curation polypeptide 7662330 7665788 . + . ID=GSCOCP00034396001;Dbxref=GENE3D:G3DSA:1.10.287.190,GENE3D:G3DSA:2.30.18.10,InterPro:IPR003194,InterPro:IPR009083,InterPro:IPR009088,InterPro:IPR015871,InterPro:IPR015872,PANTHER:PTHR10966,PFAM:PF02268,PFAM:PF02751,PIR:PIRSF009415,PRODOM:PD009224,SUPERFAMILY:SSF47396,SUPERFAMILY:SSF50784,SwissProt:A2XZI2,SwissProt:Q0DLD3,SwissProt:Q39236,TAIR:AT4G24440.1,TrEMBL:A5AJ11,TrEMBL:D7M8U2,TrEMBL:Q53YU1;Derives_from=GSCOCT00034396001;Name=Cc10_g08370;Ontology_term=CC_evidence_code:ISS,GO:0003702,GO:0005672,GO:0006367,CC_EC_number:missing_EC_number,PRODUCT:Transcription initiation factor IIA subunit 2,CC_functional_completeness:complete,CC_gene:TFIIA-S,CC_gene:TFIIAy;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034396001~ Transcription initiation factor IIA subunit 2~ TFIIA-S~ complete;original_location=complement(join(1398744..1398872%2C1398578..1398628%2C1395414..1395554));owner=coffea | |
| 42401 chr10 manual_curation exon 7662024 7662131 . + . Parent=GSCOCT00034396001 | |
| 42402 chr10 manual_curation exon 7665648 7666243 . + . Parent=GSCOCT00034396001 | |
| 42403 chr10 manual_curation exon 7662574 7662624 . + . Parent=GSCOCT00034396001 | |
| 42404 chr10 manual_curation exon 7662313 7662458 . + . Parent=GSCOCT00034396001 | |
| 42405 chr10 manual_curation CDS 7665648 7665788 . + 0 Parent=GSCOCT00034396001 | |
| 42406 chr10 manual_curation CDS 7662574 7662624 . + 0 Parent=GSCOCT00034396001 | |
| 42407 chr10 manual_curation CDS 7662330 7662458 . + 0 Parent=GSCOCT00034396001 | |
| 42408 chr10 manual_curation gene 7672130 7690302 . + . ID=GSCOCG00034395001;Name=Cc10_g08380 | |
| 42409 chr10 manual_curation mRNA 7672130 7690302 . + . ID=GSCOCT00034395001;Parent=GSCOCG00034395001;Name=Cc10_g08380 | |
| 42410 chr10 manual_curation polypeptide 7672557 7690059 . + . ID=GSCOCP00034395001;Dbxref=InterPro:IPR000449,InterPro:IPR000569,InterPro:IPR003903,InterPro:IPR009060,InterPro:IPR010309,InterPro:IPR010314,InterPro:IPR015940,InterPro:IPR016024,PFAM:PF00627,PFAM:PF00632,PFAM:PF06012,PFAM:PF06025,PROFILE:PS50030,PROFILE:PS50237,PROFILE:PS50330,SMART:SM00119,SMART:SM00165,SUPERFAMILY:SSF46934,SUPERFAMILY:SSF48371,SUPERFAMILY:SSF56204,SwissProt:Q8GY23,SwissProt:Q8H0T4,SwissProt:Q9P4Z1,TAIR:AT1G55860.1,TAIR:AT1G70320.1,TAIR:AT3G17205.1,TrEMBL:B9SMZ3,TrEMBL:F6H151,TrEMBL:G7JYH3;Derives_from=GSCOCT00034395001;Name=Cc10_g08380;Ontology_term=CC_evidence_code:ISS,GO:0005488,GO:0005622,GO:0006464,GO:0016881,CC_EC_number:missing_EC_number,PRODUCT:E3 ubiquitin protein ligase upl2%2C putative,CC_functional_completeness:complete,CC_gene:UPL2,CC_gene:UPL1,CC_gene:B11B22.010;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034395001~ E3 ubiquitin protein ligase upl2%2C putative~ UPL2~ complete;original_location=complement(join(1388550..1388645%2C1385661..1385756%2C1385323..1385526%2C1378584..1385157%2C1377386..1378446%2C1376979..1377266%2C1376696..1376900%2C1375579..1375847%2C1375205..1375479%2C1373631..1374741%2C1373413..1373559%2C1373239..1373319%2C1372931..1373156%2C1372484..1372623%2C1371396..1371502%2C1371143..1371245));owner=coffea | |
| 42411 chr10 manual_curation exon 7672130 7672322 . + . Parent=GSCOCT00034395001 | |
| 42412 chr10 manual_curation exon 7689957 7690302 . + . Parent=GSCOCT00034395001 | |
| 42413 chr10 manual_curation exon 7689700 7689806 . + . Parent=GSCOCT00034395001 | |
| 42414 chr10 manual_curation exon 7688579 7688718 . + . Parent=GSCOCT00034395001 | |
| 42415 chr10 manual_curation exon 7688046 7688271 . + . Parent=GSCOCT00034395001 | |
| 42416 chr10 manual_curation exon 7687883 7687963 . + . Parent=GSCOCT00034395001 | |
| 42417 chr10 manual_curation exon 7687643 7687789 . + . Parent=GSCOCT00034395001 | |
| 42418 chr10 manual_curation exon 7686461 7687571 . + . Parent=GSCOCT00034395001 | |
| 42419 chr10 manual_curation exon 7685723 7685997 . + . Parent=GSCOCT00034395001 | |
| 42420 chr10 manual_curation exon 7685355 7685623 . + . Parent=GSCOCT00034395001 | |
| 42421 chr10 manual_curation exon 7684302 7684506 . + . Parent=GSCOCT00034395001 | |
| 42422 chr10 manual_curation exon 7683936 7684223 . + . Parent=GSCOCT00034395001 | |
| 42423 chr10 manual_curation exon 7682756 7683816 . + . Parent=GSCOCT00034395001 | |
| 42424 chr10 manual_curation exon 7676045 7682618 . + . Parent=GSCOCT00034395001 | |
| 42425 chr10 manual_curation exon 7675676 7675879 . + . Parent=GSCOCT00034395001 | |
| 42426 chr10 manual_curation exon 7675446 7675541 . + . Parent=GSCOCT00034395001 | |
| 42427 chr10 manual_curation exon 7672527 7672652 . + . Parent=GSCOCT00034395001 | |
| 42428 chr10 manual_curation CDS 7689957 7690059 . + 2 Parent=GSCOCT00034395001 | |
| 42429 chr10 manual_curation CDS 7689700 7689806 . + 0 Parent=GSCOCT00034395001 | |
| 42430 chr10 manual_curation CDS 7688579 7688718 . + 1 Parent=GSCOCT00034395001 | |
| 42431 chr10 manual_curation CDS 7688046 7688271 . + 0 Parent=GSCOCT00034395001 | |
| 42432 chr10 manual_curation CDS 7687883 7687963 . + 0 Parent=GSCOCT00034395001 | |
| 42433 chr10 manual_curation CDS 7687643 7687789 . + 0 Parent=GSCOCT00034395001 | |
| 42434 chr10 manual_curation CDS 7686461 7687571 . + 2 Parent=GSCOCT00034395001 | |
| 42435 chr10 manual_curation CDS 7685723 7685997 . + 0 Parent=GSCOCT00034395001 | |
| 42436 chr10 manual_curation CDS 7685355 7685623 . + 1 Parent=GSCOCT00034395001 | |
| 42437 chr10 manual_curation CDS 7684302 7684506 . + 0 Parent=GSCOCT00034395001 | |
| 42438 chr10 manual_curation CDS 7683936 7684223 . + 0 Parent=GSCOCT00034395001 | |
| 42439 chr10 manual_curation CDS 7682756 7683816 . + 1 Parent=GSCOCT00034395001 | |
| 42440 chr10 manual_curation CDS 7676045 7682618 . + 0 Parent=GSCOCT00034395001 | |
| 42441 chr10 manual_curation CDS 7675676 7675879 . + 0 Parent=GSCOCT00034395001 | |
| 42442 chr10 manual_curation CDS 7675446 7675541 . + 0 Parent=GSCOCT00034395001 | |
| 42443 chr10 manual_curation CDS 7672557 7672652 . + 0 Parent=GSCOCT00034395001 | |
| 42444 chr10 manual_curation gene 7690807 7699690 . - . ID=GSCOCG00034394001;Name=Cc10_g08390 | |
| 42445 chr10 manual_curation mRNA 7690807 7699690 . - . ID=GSCOCT00034394001;Parent=GSCOCG00034394001;Name=Cc10_g08390 | |
| 42446 chr10 manual_curation polypeptide 7691025 7699690 . - . ID=GSCOCP00034394001;Dbxref=GENE3D:G3DSA:3.40.850.10,InterPro:IPR001752,InterPro:IPR019821,PFAM:PF00225,PRINTS:PR00380,PROFILE:PS50067,PROSITE:PS00411,SMART:SM00129,SwissProt:O35231,SwissProt:O81635,SwissProt:Q9BVG8,TAIR:AT1G72250.2,TAIR:AT2G22610.1,TAIR:AT5G27550.1,TrEMBL:B9SMZ4,TrEMBL:F6H150,TrEMBL:F6I722;Derives_from=GSCOCT00034394001;Name=Cc10_g08390;Ontology_term=CC_evidence_code:ISS,GO:0003777,GO:0005524,GO:0007018,CC_EC_number:missing_EC_number,PRODUCT:Di-glucose binding protein with Kinesin motor domain,CC_functional_completeness:complete,CC_gene:ATK4,CC_gene:Kifc3,CC_gene:KIFC3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034394001~ Di-glucose binding protein with Kinesin motor domain~ ATK4~ complete;original_location=join(1361512..1361619%2C1362062..1362233%2C1362407..1362652%2C1362812..1362921%2C1363014..1363113%2C1363181..1363286%2C1363403..1363569%2C1363920..1364193%2C1366796..1366957%2C1367159..1367374%2C1367454..1367491%2C1367795..1367958%2C1368175..1368426%2C1368508..1368573%2C1368951..1369025%2C1369460..1369531%2C1369692..1370177);owner=coffea | |
| 42447 chr10 manual_curation exon 7699583 7699690 . - . Parent=GSCOCT00034394001 | |
| 42448 chr10 manual_curation exon 7698969 7699140 . - . Parent=GSCOCT00034394001 | |
| 42449 chr10 manual_curation exon 7698550 7698795 . - . Parent=GSCOCT00034394001 | |
| 42450 chr10 manual_curation exon 7698281 7698390 . - . Parent=GSCOCT00034394001 | |
| 42451 chr10 manual_curation exon 7698089 7698188 . - . Parent=GSCOCT00034394001 | |
| 42452 chr10 manual_curation exon 7697916 7698021 . - . Parent=GSCOCT00034394001 | |
| 42453 chr10 manual_curation exon 7697633 7697799 . - . Parent=GSCOCT00034394001 | |
| 42454 chr10 manual_curation exon 7697009 7697282 . - . Parent=GSCOCT00034394001 | |
| 42455 chr10 manual_curation exon 7694245 7694406 . - . Parent=GSCOCT00034394001 | |
| 42456 chr10 manual_curation exon 7693828 7694043 . - . Parent=GSCOCT00034394001 | |
| 42457 chr10 manual_curation exon 7693711 7693748 . - . Parent=GSCOCT00034394001 | |
| 42458 chr10 manual_curation exon 7693244 7693407 . - . Parent=GSCOCT00034394001 | |
| 42459 chr10 manual_curation exon 7692776 7693027 . - . Parent=GSCOCT00034394001 | |
| 42460 chr10 manual_curation exon 7692629 7692694 . - . Parent=GSCOCT00034394001 | |
| 42461 chr10 manual_curation exon 7692177 7692251 . - . Parent=GSCOCT00034394001 | |
| 42462 chr10 manual_curation exon 7691671 7691742 . - . Parent=GSCOCT00034394001 | |
| 42463 chr10 manual_curation exon 7690807 7691510 . - . Parent=GSCOCT00034394001 | |
| 42464 chr10 manual_curation CDS 7699583 7699690 . - 0 Parent=GSCOCT00034394001 | |
| 42465 chr10 manual_curation CDS 7698969 7699140 . - 0 Parent=GSCOCT00034394001 | |
| 42466 chr10 manual_curation CDS 7698550 7698795 . - 1 Parent=GSCOCT00034394001 | |
| 42467 chr10 manual_curation CDS 7698281 7698390 . - 1 Parent=GSCOCT00034394001 | |
| 42468 chr10 manual_curation CDS 7698089 7698188 . - 0 Parent=GSCOCT00034394001 | |
| 42469 chr10 manual_curation CDS 7697916 7698021 . - 1 Parent=GSCOCT00034394001 | |
| 42470 chr10 manual_curation CDS 7697633 7697799 . - 2 Parent=GSCOCT00034394001 | |
| 42471 chr10 manual_curation CDS 7697009 7697282 . - 1 Parent=GSCOCT00034394001 | |
| 42472 chr10 manual_curation CDS 7694245 7694406 . - 2 Parent=GSCOCT00034394001 | |
| 42473 chr10 manual_curation CDS 7693828 7694043 . - 2 Parent=GSCOCT00034394001 | |
| 42474 chr10 manual_curation CDS 7693711 7693748 . - 2 Parent=GSCOCT00034394001 | |
| 42475 chr10 manual_curation CDS 7693244 7693407 . - 1 Parent=GSCOCT00034394001 | |
| 42476 chr10 manual_curation CDS 7692776 7693027 . - 0 Parent=GSCOCT00034394001 | |
| 42477 chr10 manual_curation CDS 7692629 7692694 . - 0 Parent=GSCOCT00034394001 | |
| 42478 chr10 manual_curation CDS 7692177 7692251 . - 0 Parent=GSCOCT00034394001 | |
| 42479 chr10 manual_curation CDS 7691671 7691742 . - 0 Parent=GSCOCT00034394001 | |
| 42480 chr10 manual_curation CDS 7691025 7691510 . - 0 Parent=GSCOCT00034394001 | |
| 42481 chr10 manual_curation gene 7708015 7709393 . - . ID=GSCOCG00034393001;Name=Cc10_g08400 | |
| 42482 chr10 manual_curation mRNA 7708015 7709393 . - . ID=GSCOCT00034393001;Parent=GSCOCG00034393001;Name=Cc10_g08400 | |
| 42483 chr10 manual_curation polypeptide 7709178 7709393 . - . ID=GSCOCP00034393001;Derives_from=GSCOCT00034393001;Name=Cc10_g08400;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034393001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1351809..1352024;owner=coffea | |
| 42484 chr10 manual_curation exon 7708015 7709393 . - . Parent=GSCOCT00034393001 | |
| 42485 chr10 manual_curation CDS 7709178 7709393 . - 0 Parent=GSCOCT00034393001 | |
| 42486 chr10 manual_curation gene 7710132 7714759 . + . ID=GSCOCG00034392001;Name=Cc10_g08410 | |
| 42487 chr10 manual_curation mRNA 7710132 7714759 . + . ID=GSCOCT00034392001;Parent=GSCOCG00034392001;Name=Cc10_g08410 | |
| 42488 chr10 manual_curation polypeptide 7710132 7714759 . + . ID=GSCOCP00034392001;Dbxref=InterPro:IPR000215,InterPro:IPR015554,PANTHER:PTHR11461,PANTHER:PTHR11461:SF24,PFAM:PF00079,SMART:SM00093,SUPERFAMILY:SSF56574,SwissProt:P93692,SwissProt:Q43492,SwissProt:Q9S7T8,TAIR:AT1G47710.1,TAIR:AT2G25240.1,TAIR:AT2G35580.1,TrEMBL:B9MVJ6,TrEMBL:B9R7I8,TrEMBL:B9SIW1;Derives_from=GSCOCT00034392001;Name=Cc10_g08410;Ontology_term=CC_evidence_code:ISS,GO:0004867,CC_EC_number:missing_EC_number,PRODUCT:Putative Serpin-ZX,CC_functional_completeness:fragment,CC_gene:At1g47710,CC_gene:PAZ7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034392001~ Putative Serpin-ZX~ At1g47710~ fragment;original_location=complement(join(1350900..1351070%2C1347372..1347562%2C1346443..1346974));owner=coffea | |
| 42489 chr10 manual_curation exon 7714228 7714759 . + . Parent=GSCOCT00034392001 | |
| 42490 chr10 manual_curation exon 7713640 7713830 . + . Parent=GSCOCT00034392001 | |
| 42491 chr10 manual_curation exon 7710132 7710302 . + . Parent=GSCOCT00034392001 | |
| 42492 chr10 manual_curation CDS 7714228 7714759 . + 2 Parent=GSCOCT00034392001 | |
| 42493 chr10 manual_curation CDS 7713640 7713830 . + 0 Parent=GSCOCT00034392001 | |
| 42494 chr10 manual_curation CDS 7710132 7710302 . + 0 Parent=GSCOCT00034392001 | |
| 42495 chr10 manual_curation gene 7715367 7718675 . - . ID=GSCOCG00034391001;Name=Cc10_g08420 | |
| 42496 chr10 manual_curation mRNA 7715367 7718675 . - . ID=GSCOCT00034391001;Parent=GSCOCG00034391001;Name=Cc10_g08420 | |
| 42497 chr10 manual_curation polypeptide 7715367 7718675 . - . ID=GSCOCP00034391001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SMART:SM00369,SwissProt:C0LGS2,SwissProt:Q8LPB4,SwissProt:Q9C9H7,TAIR:AT1G74170.1,TAIR:AT2G25470.1,TAIR:AT5G49290.1,TrEMBL:B8AUK1,TrEMBL:G7JP51,TrEMBL:G7JP53;Derives_from=GSCOCT00034391001;Name=Cc10_g08420;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At4g36180,CC_functional_completeness:fragment,CC_gene:At4g36180,CC_gene:PSKR,CC_gene:RLP12;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034391001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At4g36180~ At4g36180~ fragment;original_location=join(1342527..1342857%2C1343019..1343028%2C1343418..1343452%2C1343600..1343755%2C1343974..1345835);owner=coffea | |
| 42498 chr10 manual_curation exon 7718345 7718675 . - . Parent=GSCOCT00034391001 | |
| 42499 chr10 manual_curation exon 7718174 7718183 . - . Parent=GSCOCT00034391001 | |
| 42500 chr10 manual_curation exon 7717750 7717784 . - . Parent=GSCOCT00034391001 | |
| 42501 chr10 manual_curation exon 7717447 7717602 . - . Parent=GSCOCT00034391001 | |
| 42502 chr10 manual_curation exon 7715367 7717228 . - . Parent=GSCOCT00034391001 | |
| 42503 chr10 manual_curation CDS 7718345 7718675 . - 0 Parent=GSCOCT00034391001 | |
| 42504 chr10 manual_curation CDS 7718174 7718183 . - 1 Parent=GSCOCT00034391001 | |
| 42505 chr10 manual_curation CDS 7717750 7717784 . - 2 Parent=GSCOCT00034391001 | |
| 42506 chr10 manual_curation CDS 7717447 7717602 . - 1 Parent=GSCOCT00034391001 | |
| 42507 chr10 manual_curation CDS 7715367 7717228 . - 1 Parent=GSCOCT00034391001 | |
| 42508 chr10 manual_curation gene 7719468 7720566 . - . ID=GSCOCG00034390001;Name=Cc10_g08430 | |
| 42509 chr10 manual_curation mRNA 7719468 7720566 . - . ID=GSCOCT00034390001;Parent=GSCOCG00034390001;Name=Cc10_g08430 | |
| 42510 chr10 manual_curation polypeptide 7719860 7720495 . - . ID=GSCOCP00034390001;Dbxref=GENE3D:G3DSA:1.25.40.10,InterPro:IPR001440,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR019734,PFAM:PF00515,PROFILE:PS50005,PROFILE:PS50293,SMART:SM00028,TAIR:AT5G65520.1,TrEMBL:A5BNJ1,TrEMBL:F6H144,TrEMBL:F6HRZ1;Derives_from=GSCOCT00034390001;Name=Cc10_g08430;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:Putative Tetratricopeptide repeat (TPR)-like superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034390001~ Putative Tetratricopeptide repeat (TPR)-like superfamily protein~ unknown_gene~ complete;original_location=1340707..1341342;owner=coffea | |
| 42511 chr10 manual_curation exon 7719468 7720566 . - . Parent=GSCOCT00034390001 | |
| 42512 chr10 manual_curation CDS 7719860 7720495 . - 0 Parent=GSCOCT00034390001 | |
| 42513 chr10 manual_curation gene 7722022 7730542 . - . ID=GSCOCG00034389001;Name=Cc10_g08440 | |
| 42514 chr10 manual_curation mRNA 7722022 7730542 . - . ID=GSCOCT00034389001;Parent=GSCOCG00034389001;Name=Cc10_g08440 | |
| 42515 chr10 manual_curation polypeptide 7722463 7730190 . - . ID=GSCOCP00034389001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR020635,PFAM:PF07714,PRINTS:PR00109,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q05609,SwissProt:Q54H45,SwissProt:Q54H46,TAIR:AT1G18160.1,TAIR:AT4G24480.1,TAIR:AT5G03730.2,TrEMBL:B9RJZ0,TrEMBL:E0CRX8,TrEMBL:I1JV83;Derives_from=GSCOCT00034389001;Name=Cc10_g08440;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Protein kinase superfamily protein,CC_functional_completeness:complete,CC_gene:CTR1,CC_gene:drkA,CC_gene:drkB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034389001~ Protein kinase superfamily protein~ CTR1~ complete;original_location=join(1331012..1331905%2C1332497..1332795%2C1332877..1333021%2C1334034..1334149%2C1334772..1334977%2C1335494..1335910%2C1336012..1336052%2C1336458..1336526%2C1336783..1336883%2C1336987..1337071%2C1337149..1337247%2C1337335..1337403%2C1338030..1338161%2C1338295..1338389%2C1338643..1338739);owner=coffea | |
| 42516 chr10 manual_curation exon 7729297 7730542 . - . Parent=GSCOCT00034389001 | |
| 42517 chr10 manual_curation exon 7728407 7728705 . - . Parent=GSCOCT00034389001 | |
| 42518 chr10 manual_curation exon 7728181 7728325 . - . Parent=GSCOCT00034389001 | |
| 42519 chr10 manual_curation exon 7727053 7727168 . - . Parent=GSCOCT00034389001 | |
| 42520 chr10 manual_curation exon 7726225 7726430 . - . Parent=GSCOCT00034389001 | |
| 42521 chr10 manual_curation exon 7725292 7725708 . - . Parent=GSCOCT00034389001 | |
| 42522 chr10 manual_curation exon 7725150 7725190 . - . Parent=GSCOCT00034389001 | |
| 42523 chr10 manual_curation exon 7724676 7724744 . - . Parent=GSCOCT00034389001 | |
| 42524 chr10 manual_curation exon 7724319 7724419 . - . Parent=GSCOCT00034389001 | |
| 42525 chr10 manual_curation exon 7724131 7724215 . - . Parent=GSCOCT00034389001 | |
| 42526 chr10 manual_curation exon 7723955 7724053 . - . Parent=GSCOCT00034389001 | |
| 42527 chr10 manual_curation exon 7723799 7723867 . - . Parent=GSCOCT00034389001 | |
| 42528 chr10 manual_curation exon 7723041 7723172 . - . Parent=GSCOCT00034389001 | |
| 42529 chr10 manual_curation exon 7722813 7722907 . - . Parent=GSCOCT00034389001 | |
| 42530 chr10 manual_curation exon 7722022 7722559 . - . Parent=GSCOCT00034389001 | |
| 42531 chr10 manual_curation CDS 7729297 7730190 . - 0 Parent=GSCOCT00034389001 | |
| 42532 chr10 manual_curation CDS 7728407 7728705 . - 0 Parent=GSCOCT00034389001 | |
| 42533 chr10 manual_curation CDS 7728181 7728325 . - 2 Parent=GSCOCT00034389001 | |
| 42534 chr10 manual_curation CDS 7727053 7727168 . - 0 Parent=GSCOCT00034389001 | |
| 42535 chr10 manual_curation CDS 7726225 7726430 . - 2 Parent=GSCOCT00034389001 | |
| 42536 chr10 manual_curation CDS 7725292 7725708 . - 1 Parent=GSCOCT00034389001 | |
| 42537 chr10 manual_curation CDS 7725150 7725190 . - 1 Parent=GSCOCT00034389001 | |
| 42538 chr10 manual_curation CDS 7724676 7724744 . - 0 Parent=GSCOCT00034389001 | |
| 42539 chr10 manual_curation CDS 7724319 7724419 . - 0 Parent=GSCOCT00034389001 | |
| 42540 chr10 manual_curation CDS 7724131 7724215 . - 2 Parent=GSCOCT00034389001 | |
| 42541 chr10 manual_curation CDS 7723955 7724053 . - 0 Parent=GSCOCT00034389001 | |
| 42542 chr10 manual_curation CDS 7723799 7723867 . - 0 Parent=GSCOCT00034389001 | |
| 42543 chr10 manual_curation CDS 7723041 7723172 . - 0 Parent=GSCOCT00034389001 | |
| 42544 chr10 manual_curation CDS 7722813 7722907 . - 0 Parent=GSCOCT00034389001 | |
| 42545 chr10 manual_curation CDS 7722463 7722559 . - 2 Parent=GSCOCT00034389001 | |
| 42546 chr10 manual_curation gene 7745913 7754491 . + . ID=GSCOCG00034388001;Name=Cc10_g08450 | |
| 42547 chr10 manual_curation mRNA 7745913 7754491 . + . ID=GSCOCT00034388001;Parent=GSCOCG00034388001;Name=Cc10_g08450 | |
| 42548 chr10 manual_curation polypeptide 7746440 7754491 . + . ID=GSCOCP00034388001;Dbxref=TrEMBL:A5BTR0,TrEMBL:B9SN03,TrEMBL:G7J4K4;Derives_from=GSCOCT00034388001;Name=Cc10_g08450;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034388001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=complement(join(1314641..1314762%2C1312856..1312919%2C1311247..1311478%2C1310342..1310526%2C1308454..1308817%2C1306711..1306937));owner=coffea | |
| 42549 chr10 manual_curation exon 7745913 7746119 . + . Parent=GSCOCT00034388001 | |
| 42550 chr10 manual_curation exon 7754265 7754491 . + . Parent=GSCOCT00034388001 | |
| 42551 chr10 manual_curation exon 7752385 7752748 . + . Parent=GSCOCT00034388001 | |
| 42552 chr10 manual_curation exon 7750676 7750860 . + . Parent=GSCOCT00034388001 | |
| 42553 chr10 manual_curation exon 7749724 7749955 . + . Parent=GSCOCT00034388001 | |
| 42554 chr10 manual_curation exon 7748283 7748346 . + . Parent=GSCOCT00034388001 | |
| 42555 chr10 manual_curation exon 7746345 7746561 . + . Parent=GSCOCT00034388001 | |
| 42556 chr10 manual_curation CDS 7754265 7754491 . + 1 Parent=GSCOCT00034388001 | |
| 42557 chr10 manual_curation CDS 7752385 7752748 . + 0 Parent=GSCOCT00034388001 | |
| 42558 chr10 manual_curation CDS 7750676 7750860 . + 1 Parent=GSCOCT00034388001 | |
| 42559 chr10 manual_curation CDS 7749724 7749955 . + 0 Parent=GSCOCT00034388001 | |
| 42560 chr10 manual_curation CDS 7748283 7748346 . + 2 Parent=GSCOCT00034388001 | |
| 42561 chr10 manual_curation CDS 7746440 7746561 . + 0 Parent=GSCOCT00034388001 | |
| 42562 chr10 manual_curation gene 7759924 7786233 . + . ID=GSCOCG00034387001;Name=Cc10_g08460 | |
| 42563 chr10 manual_curation mRNA 7759924 7786233 . + . ID=GSCOCT00034387001;Parent=GSCOCG00034387001;Name=Cc10_g08460 | |
| 42564 chr10 manual_curation polypeptide 7759924 7786233 . + . ID=GSCOCP00034387001;Dbxref=GENE3D:G3DSA:1.10.1540.10,GENE3D:G3DSA:2.130.10.10,InterPro:IPR000409,InterPro:IPR001680,InterPro:IPR008985,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR016024,InterPro:IPR017986,InterPro:IPR019775,InterPro:IPR019781,InterPro:IPR019782,PFAM:PF00400,PFAM:PF02138,PROFILE:PS50082,PROFILE:PS50197,PROFILE:PS50294,PROSITE:PS00678,SMART:SM00320,SUPERFAMILY:SSF48371,SUPERFAMILY:SSF49899,SUPERFAMILY:SSF50978,SUPERFAMILY:SSF81837,SwissProt:P50851,SwissProt:Q54U63,SwissProt:Q9W4E2,TAIR:AT1G58230.1,TAIR:AT2G45540.2,TAIR:AT4G02660.1,TrEMBL:B9SN03,TrEMBL:F6H145,TrEMBL:G7J4K4;Derives_from=GSCOCT00034387001;Name=Cc10_g08460;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:binding,CC_functional_completeness:complete,CC_gene:lvsC,CC_gene:LRBA,CC_gene:rg;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034387001~ binding~ lvsC~ complete;original_location=complement(join(1301235..1301278%2C1301056..1301124%2C1300289..1300714%2C1299691..1300018%2C1298083..1298535%2C1297818..1297976%2C1296671..1296820%2C1295047..1295202%2C1294815..1294856%2C1294341..1294685%2C1291838..1292011%2C1291501..1291661%2C1291019..1291334%2C1290504..1290933%2C1289947..1290283%2C1289636..1289824%2C1286725..1286986%2C1286385..1286576%2C1286091..1286309%2C1285839..1286009%2C1284995..1285110%2C1284358..1284822%2C1283999..1284209%2C1282589..1282810%2C1282009..1282485%2C1281598..1281939%2C1281053..1281502%2C1280084..1280130%2C1279893..1279986%2C1279589..1279795%2C1278271..1278396%2C1277796..1278164%2C1277474..1277705%2C1274969..1275651));owner=coffea | |
| 42565 chr10 manual_curation exon 7785551 7786233 . + . Parent=GSCOCT00034387001 | |
| 42566 chr10 manual_curation exon 7783497 7783728 . + . Parent=GSCOCT00034387001 | |
| 42567 chr10 manual_curation exon 7783038 7783406 . + . Parent=GSCOCT00034387001 | |
| 42568 chr10 manual_curation exon 7782806 7782931 . + . Parent=GSCOCT00034387001 | |
| 42569 chr10 manual_curation exon 7781407 7781613 . + . Parent=GSCOCT00034387001 | |
| 42570 chr10 manual_curation exon 7781216 7781309 . + . Parent=GSCOCT00034387001 | |
| 42571 chr10 manual_curation exon 7781072 7781118 . + . Parent=GSCOCT00034387001 | |
| 42572 chr10 manual_curation exon 7779700 7780149 . + . Parent=GSCOCT00034387001 | |
| 42573 chr10 manual_curation exon 7779263 7779604 . + . Parent=GSCOCT00034387001 | |
| 42574 chr10 manual_curation exon 7778717 7779193 . + . Parent=GSCOCT00034387001 | |
| 42575 chr10 manual_curation exon 7778392 7778613 . + . Parent=GSCOCT00034387001 | |
| 42576 chr10 manual_curation exon 7776993 7777203 . + . Parent=GSCOCT00034387001 | |
| 42577 chr10 manual_curation exon 7776380 7776844 . + . Parent=GSCOCT00034387001 | |
| 42578 chr10 manual_curation exon 7776092 7776207 . + . Parent=GSCOCT00034387001 | |
| 42579 chr10 manual_curation exon 7775193 7775363 . + . Parent=GSCOCT00034387001 | |
| 42580 chr10 manual_curation exon 7774893 7775111 . + . Parent=GSCOCT00034387001 | |
| 42581 chr10 manual_curation exon 7774626 7774817 . + . Parent=GSCOCT00034387001 | |
| 42582 chr10 manual_curation exon 7774216 7774477 . + . Parent=GSCOCT00034387001 | |
| 42583 chr10 manual_curation exon 7771378 7771566 . + . Parent=GSCOCT00034387001 | |
| 42584 chr10 manual_curation exon 7770919 7771255 . + . Parent=GSCOCT00034387001 | |
| 42585 chr10 manual_curation exon 7770269 7770698 . + . Parent=GSCOCT00034387001 | |
| 42586 chr10 manual_curation exon 7769868 7770183 . + . Parent=GSCOCT00034387001 | |
| 42587 chr10 manual_curation exon 7769541 7769701 . + . Parent=GSCOCT00034387001 | |
| 42588 chr10 manual_curation exon 7769191 7769364 . + . Parent=GSCOCT00034387001 | |
| 42589 chr10 manual_curation exon 7766517 7766861 . + . Parent=GSCOCT00034387001 | |
| 42590 chr10 manual_curation exon 7766346 7766387 . + . Parent=GSCOCT00034387001 | |
| 42591 chr10 manual_curation exon 7766000 7766155 . + . Parent=GSCOCT00034387001 | |
| 42592 chr10 manual_curation exon 7764382 7764531 . + . Parent=GSCOCT00034387001 | |
| 42593 chr10 manual_curation exon 7763226 7763384 . + . Parent=GSCOCT00034387001 | |
| 42594 chr10 manual_curation exon 7762667 7763119 . + . Parent=GSCOCT00034387001 | |
| 42595 chr10 manual_curation exon 7761184 7761511 . + . Parent=GSCOCT00034387001 | |
| 42596 chr10 manual_curation exon 7760488 7760913 . + . Parent=GSCOCT00034387001 | |
| 42597 chr10 manual_curation exon 7760078 7760146 . + . Parent=GSCOCT00034387001 | |
| 42598 chr10 manual_curation exon 7759924 7759967 . + . Parent=GSCOCT00034387001 | |
| 42599 chr10 manual_curation CDS 7785551 7786233 . + 1 Parent=GSCOCT00034387001 | |
| 42600 chr10 manual_curation CDS 7783497 7783728 . + 0 Parent=GSCOCT00034387001 | |
| 42601 chr10 manual_curation CDS 7783038 7783406 . + 0 Parent=GSCOCT00034387001 | |
| 42602 chr10 manual_curation CDS 7782806 7782931 . + 0 Parent=GSCOCT00034387001 | |
| 42603 chr10 manual_curation CDS 7781407 7781613 . + 0 Parent=GSCOCT00034387001 | |
| 42604 chr10 manual_curation CDS 7781216 7781309 . + 2 Parent=GSCOCT00034387001 | |
| 42605 chr10 manual_curation CDS 7781072 7781118 . + 0 Parent=GSCOCT00034387001 | |
| 42606 chr10 manual_curation CDS 7779700 7780149 . + 0 Parent=GSCOCT00034387001 | |
| 42607 chr10 manual_curation CDS 7779263 7779604 . + 0 Parent=GSCOCT00034387001 | |
| 42608 chr10 manual_curation CDS 7778717 7779193 . + 0 Parent=GSCOCT00034387001 | |
| 42609 chr10 manual_curation CDS 7778392 7778613 . + 0 Parent=GSCOCT00034387001 | |
| 42610 chr10 manual_curation CDS 7776993 7777203 . + 2 Parent=GSCOCT00034387001 | |
| 42611 chr10 manual_curation CDS 7776380 7776844 . + 2 Parent=GSCOCT00034387001 | |
| 42612 chr10 manual_curation CDS 7776092 7776207 . + 0 Parent=GSCOCT00034387001 | |
| 42613 chr10 manual_curation CDS 7775193 7775363 . + 0 Parent=GSCOCT00034387001 | |
| 42614 chr10 manual_curation CDS 7774893 7775111 . + 0 Parent=GSCOCT00034387001 | |
| 42615 chr10 manual_curation CDS 7774626 7774817 . + 0 Parent=GSCOCT00034387001 | |
| 42616 chr10 manual_curation CDS 7774216 7774477 . + 2 Parent=GSCOCT00034387001 | |
| 42617 chr10 manual_curation CDS 7771378 7771566 . + 2 Parent=GSCOCT00034387001 | |
| 42618 chr10 manual_curation CDS 7770919 7771255 . + 1 Parent=GSCOCT00034387001 | |
| 42619 chr10 manual_curation CDS 7770269 7770698 . + 0 Parent=GSCOCT00034387001 | |
| 42620 chr10 manual_curation CDS 7769868 7770183 . + 2 Parent=GSCOCT00034387001 | |
| 42621 chr10 manual_curation CDS 7769541 7769701 . + 0 Parent=GSCOCT00034387001 | |
| 42622 chr10 manual_curation CDS 7769191 7769364 . + 0 Parent=GSCOCT00034387001 | |
| 42623 chr10 manual_curation CDS 7766517 7766861 . + 0 Parent=GSCOCT00034387001 | |
| 42624 chr10 manual_curation CDS 7766346 7766387 . + 0 Parent=GSCOCT00034387001 | |
| 42625 chr10 manual_curation CDS 7766000 7766155 . + 0 Parent=GSCOCT00034387001 | |
| 42626 chr10 manual_curation CDS 7764382 7764531 . + 0 Parent=GSCOCT00034387001 | |
| 42627 chr10 manual_curation CDS 7763226 7763384 . + 0 Parent=GSCOCT00034387001 | |
| 42628 chr10 manual_curation CDS 7762667 7763119 . + 0 Parent=GSCOCT00034387001 | |
| 42629 chr10 manual_curation CDS 7761184 7761511 . + 2 Parent=GSCOCT00034387001 | |
| 42630 chr10 manual_curation CDS 7760488 7760913 . + 2 Parent=GSCOCT00034387001 | |
| 42631 chr10 manual_curation CDS 7760078 7760146 . + 2 Parent=GSCOCT00034387001 | |
| 42632 chr10 manual_curation CDS 7759924 7759967 . + 0 Parent=GSCOCT00034387001 | |
| 42633 chr10 manual_curation gene 7799184 7800626 . - . ID=GSCOCG00034385001;Name=Cc10_g08470 | |
| 42634 chr10 manual_curation mRNA 7799184 7800626 . - . ID=GSCOCT00034385001;Parent=GSCOCG00034385001;Name=Cc10_g08470 | |
| 42635 chr10 manual_curation polypeptide 7799184 7800626 . - . ID=GSCOCP00034385001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,SwissProt:Q66PF2,SwissProt:Q9LSM0,SwissProt:Q9LTA3,TAIR:AT2G22590.1,TAIR:AT5G49690.1,TAIR:AT5G65550.1,TrEMBL:B9GVM8,TrEMBL:B9SN02,TrEMBL:D7MPE2;Derives_from=GSCOCT00034385001;Name=Cc10_g08470;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:UDP-glycosyltransferase 91C1,CC_functional_completeness:complete,CC_gene:UGT91C1,CC_gene:UGT91B1,CC_gene:GT4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034385001~ UDP-glycosyltransferase 91C1~ UGT91C1~ complete;original_location=1260576..1262018;owner=coffea | |
| 42636 chr10 manual_curation exon 7799184 7800626 . - . Parent=GSCOCT00034385001 | |
| 42637 chr10 manual_curation CDS 7799184 7800626 . - 0 Parent=GSCOCT00034385001 | |
| 42638 chr10 manual_curation gene 7807084 7808532 . - . ID=GSCOCG00034383001;Name=Cc10_g08480 | |
| 42639 chr10 manual_curation mRNA 7807084 7808532 . - . ID=GSCOCT00034383001;Parent=GSCOCG00034383001;Name=Cc10_g08480 | |
| 42640 chr10 manual_curation polypeptide 7807084 7808532 . - . ID=GSCOCP00034383001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,SwissProt:Q66PF2,SwissProt:Q9LSM0,SwissProt:Q9LTA3,TAIR:AT2G22590.1,TAIR:AT5G49690.1,TAIR:AT5G65550.1,TrEMBL:B9GVM8,TrEMBL:B9SN02,TrEMBL:D7MPE2;Derives_from=GSCOCT00034383001;Name=Cc10_g08480;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:UDP-glycosyltransferase 91C1,CC_functional_completeness:complete,CC_gene:UGT91C1,CC_gene:GT4,CC_gene:UGT91B1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034383001~ UDP-glycosyltransferase 91C1~ UGT91C1~ complete;original_location=1252670..1254118;owner=coffea | |
| 42641 chr10 manual_curation exon 7807084 7808532 . - . Parent=GSCOCT00034383001 | |
| 42642 chr10 manual_curation CDS 7807084 7808532 . - 0 Parent=GSCOCT00034383001 | |
| 42643 chr10 manual_curation gene 7811096 7815345 . + . ID=GSCOCG00034382001;Name=Cc10_g08490 | |
| 42644 chr10 manual_curation mRNA 7811096 7815345 . + . ID=GSCOCT00034382001;Parent=GSCOCG00034382001;Name=Cc10_g08490 | |
| 42645 chr10 manual_curation polypeptide 7811474 7814867 . + . ID=GSCOCP00034382001;Dbxref=GENE3D:G3DSA:3.30.50.10,InterPro:IPR000679,InterPro:IPR010399,InterPro:IPR010402,InterPro:IPR013088,PFAM:PF00320,PFAM:PF06200,PFAM:PF06203,PROFILE:PS50114,PROFILE:PS51017,PROFILE:PS51320,PROSITE:PS00344,SMART:SM00401,SwissProt:Q8GXL7,SwissProt:Q8H1G0,SwissProt:Q9LRH6,TAIR:AT1G51600.1,TAIR:AT3G21175.1,TAIR:AT4G24470.3,TrEMBL:B9H6T8,TrEMBL:D9ZIZ3,TrEMBL:F6H146;Derives_from=GSCOCT00034382001;Name=Cc10_g08490;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0008270,GO:0043565,CC_EC_number:missing_EC_number,PRODUCT:Putative GATA transcription factor 25,CC_functional_completeness:complete,CC_gene:GATA25,CC_gene:GATA24,CC_gene:GATA28;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034382001~ Putative GATA transcription factor 25~ GATA25~ complete;original_location=complement(join(1249390..1249728%2C1248753..1248836%2C1248539..1248672%2C1247440..1247544%2C1247117..1247222%2C1246564..1246611%2C1246335..1246439));owner=coffea | |
| 42646 chr10 manual_curation exon 7814763 7815345 . + . Parent=GSCOCT00034382001 | |
| 42647 chr10 manual_curation exon 7814591 7814638 . + . Parent=GSCOCT00034382001 | |
| 42648 chr10 manual_curation exon 7813980 7814085 . + . Parent=GSCOCT00034382001 | |
| 42649 chr10 manual_curation exon 7813658 7813762 . + . Parent=GSCOCT00034382001 | |
| 42650 chr10 manual_curation exon 7812530 7812663 . + . Parent=GSCOCT00034382001 | |
| 42651 chr10 manual_curation exon 7812366 7812449 . + . Parent=GSCOCT00034382001 | |
| 42652 chr10 manual_curation exon 7811096 7811812 . + . Parent=GSCOCT00034382001 | |
| 42653 chr10 manual_curation CDS 7814763 7814867 . + 0 Parent=GSCOCT00034382001 | |
| 42654 chr10 manual_curation CDS 7814591 7814638 . + 0 Parent=GSCOCT00034382001 | |
| 42655 chr10 manual_curation CDS 7813980 7814085 . + 2 Parent=GSCOCT00034382001 | |
| 42656 chr10 manual_curation CDS 7813658 7813762 . + 2 Parent=GSCOCT00034382001 | |
| 42657 chr10 manual_curation CDS 7812530 7812663 . + 0 Parent=GSCOCT00034382001 | |
| 42658 chr10 manual_curation CDS 7812366 7812449 . + 0 Parent=GSCOCT00034382001 | |
| 42659 chr10 manual_curation CDS 7811474 7811812 . + 0 Parent=GSCOCT00034382001 | |
| 42660 chr10 manual_curation gene 7816705 7822019 . + . ID=GSCOCG00034381001;Name=Cc10_g08500 | |
| 42661 chr10 manual_curation mRNA 7816705 7822019 . + . ID=GSCOCT00034381001;Parent=GSCOCG00034381001;Name=Cc10_g08500 | |
| 42662 chr10 manual_curation polypeptide 7816840 7821678 . + . ID=GSCOCP00034381001;Dbxref=InterPro:IPR000679,InterPro:IPR010399,InterPro:IPR010402,PFAM:PF00320,PFAM:PF06200,PFAM:PF06203,PROFILE:PS50114,PROFILE:PS51017,PROFILE:PS51320,PROSITE:PS00344,SMART:SM00401,SwissProt:Q8GXL7,SwissProt:Q8H1G0,SwissProt:Q9LRH6,TAIR:AT1G51600.1,TAIR:AT3G21175.1,TAIR:AT4G24470.3,TrEMBL:B9SN00,TrEMBL:F6H147,TrEMBL:I1K9S6;Derives_from=GSCOCT00034381001;Name=Cc10_g08500;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0008270,GO:0043565,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:GATA24,CC_gene:GATA28,CC_gene:GATA25;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034381001~ Putative uncharacterized protein~ GATA24~ complete;original_location=complement(join(1244030..1244362%2C1242866..1242952%2C1242647..1242780%2C1241912..1242025%2C1241678..1241792%2C1240575..1240634%2C1240239..1240307%2C1240096..1240158%2C1239671..1239751%2C1239524..1239592));owner=coffea | |
| 42663 chr10 manual_curation exon 7821610 7822019 . + . Parent=GSCOCT00034381001 | |
| 42664 chr10 manual_curation exon 7821451 7821531 . + . Parent=GSCOCT00034381001 | |
| 42665 chr10 manual_curation exon 7821044 7821106 . + . Parent=GSCOCT00034381001 | |
| 42666 chr10 manual_curation exon 7820895 7820963 . + . Parent=GSCOCT00034381001 | |
| 42667 chr10 manual_curation exon 7820568 7820627 . + . Parent=GSCOCT00034381001 | |
| 42668 chr10 manual_curation exon 7819410 7819524 . + . Parent=GSCOCT00034381001 | |
| 42669 chr10 manual_curation exon 7819177 7819290 . + . Parent=GSCOCT00034381001 | |
| 42670 chr10 manual_curation exon 7818422 7818555 . + . Parent=GSCOCT00034381001 | |
| 42671 chr10 manual_curation exon 7818250 7818336 . + . Parent=GSCOCT00034381001 | |
| 42672 chr10 manual_curation exon 7816705 7817172 . + . Parent=GSCOCT00034381001 | |
| 42673 chr10 manual_curation CDS 7821610 7821678 . + 0 Parent=GSCOCT00034381001 | |
| 42674 chr10 manual_curation CDS 7821451 7821531 . + 0 Parent=GSCOCT00034381001 | |
| 42675 chr10 manual_curation CDS 7821044 7821106 . + 0 Parent=GSCOCT00034381001 | |
| 42676 chr10 manual_curation CDS 7820895 7820963 . + 0 Parent=GSCOCT00034381001 | |
| 42677 chr10 manual_curation CDS 7820568 7820627 . + 0 Parent=GSCOCT00034381001 | |
| 42678 chr10 manual_curation CDS 7819410 7819524 . + 2 Parent=GSCOCT00034381001 | |
| 42679 chr10 manual_curation CDS 7819177 7819290 . + 2 Parent=GSCOCT00034381001 | |
| 42680 chr10 manual_curation CDS 7818422 7818555 . + 0 Parent=GSCOCT00034381001 | |
| 42681 chr10 manual_curation CDS 7818250 7818336 . + 0 Parent=GSCOCT00034381001 | |
| 42682 chr10 manual_curation CDS 7816840 7817172 . + 0 Parent=GSCOCT00034381001 | |
| 42683 chr10 manual_curation gene 7823219 7850148 . - . ID=GSCOCG00034380001;Name=Cc10_g08510 | |
| 42684 chr10 manual_curation mRNA 7823219 7850148 . - . ID=GSCOCT00034380001;Parent=GSCOCG00034380001;Name=Cc10_g08510 | |
| 42685 chr10 manual_curation polypeptide 7823992 7849759 . - . ID=GSCOCP00034380001;Dbxref=InterPro:IPR019441,InterPro:IPR019443,PFAM:PF10347,PFAM:PF10351,TAIR:AT1G58250.2,TAIR:AT5G49680.2,TrEMBL:B9SMZ9,TrEMBL:F6H148,TrEMBL:I1K9T0;Derives_from=GSCOCT00034380001;Name=Cc10_g08510;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Golgi-body localisation protein domain %3BRNA pol II promoter Fmp27 protein domain,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034380001~ Golgi-body localisation protein domain %3BRNA pol II promoter Fmp27 protein domain~ unknown_gene~ complete;original_location=join(1211443..1211513%2C1213801..1213912%2C1215285..1215545%2C1216699..1216949%2C1218131..1218350%2C1219326..1219496%2C1219603..1219680%2C1222406..1222654%2C1223480..1225585%2C1226051..1227914%2C1228318..1228412%2C1229268..1229624%2C1229769..1229887%2C1230267..1230513%2C1231165..1231389%2C1232608..1232747%2C1234619..1234691%2C1234984..1235085%2C1235174..1235356%2C1235555..1235896%2C1235977..1236144%2C1236360..1236741%2C1237101..1237210);owner=coffea | |
| 42686 chr10 manual_curation exon 7849689 7850148 . - . Parent=GSCOCT00034380001 | |
| 42687 chr10 manual_curation exon 7847290 7847401 . - . Parent=GSCOCT00034380001 | |
| 42688 chr10 manual_curation exon 7845657 7845917 . - . Parent=GSCOCT00034380001 | |
| 42689 chr10 manual_curation exon 7844253 7844503 . - . Parent=GSCOCT00034380001 | |
| 42690 chr10 manual_curation exon 7842852 7843071 . - . Parent=GSCOCT00034380001 | |
| 42691 chr10 manual_curation exon 7841706 7841876 . - . Parent=GSCOCT00034380001 | |
| 42692 chr10 manual_curation exon 7841522 7841599 . - . Parent=GSCOCT00034380001 | |
| 42693 chr10 manual_curation exon 7838548 7838796 . - . Parent=GSCOCT00034380001 | |
| 42694 chr10 manual_curation exon 7835617 7837722 . - . Parent=GSCOCT00034380001 | |
| 42695 chr10 manual_curation exon 7833288 7835151 . - . Parent=GSCOCT00034380001 | |
| 42696 chr10 manual_curation exon 7832790 7832884 . - . Parent=GSCOCT00034380001 | |
| 42697 chr10 manual_curation exon 7831578 7831934 . - . Parent=GSCOCT00034380001 | |
| 42698 chr10 manual_curation exon 7831315 7831433 . - . Parent=GSCOCT00034380001 | |
| 42699 chr10 manual_curation exon 7830689 7830935 . - . Parent=GSCOCT00034380001 | |
| 42700 chr10 manual_curation exon 7829813 7830037 . - . Parent=GSCOCT00034380001 | |
| 42701 chr10 manual_curation exon 7828455 7828594 . - . Parent=GSCOCT00034380001 | |
| 42702 chr10 manual_curation exon 7826511 7826583 . - . Parent=GSCOCT00034380001 | |
| 42703 chr10 manual_curation exon 7826117 7826218 . - . Parent=GSCOCT00034380001 | |
| 42704 chr10 manual_curation exon 7825846 7826028 . - . Parent=GSCOCT00034380001 | |
| 42705 chr10 manual_curation exon 7825306 7825647 . - . Parent=GSCOCT00034380001 | |
| 42706 chr10 manual_curation exon 7825058 7825225 . - . Parent=GSCOCT00034380001 | |
| 42707 chr10 manual_curation exon 7824461 7824842 . - . Parent=GSCOCT00034380001 | |
| 42708 chr10 manual_curation exon 7823219 7824101 . - . Parent=GSCOCT00034380001 | |
| 42709 chr10 manual_curation CDS 7849689 7849759 . - 0 Parent=GSCOCT00034380001 | |
| 42710 chr10 manual_curation CDS 7847290 7847401 . - 2 Parent=GSCOCT00034380001 | |
| 42711 chr10 manual_curation CDS 7845657 7845917 . - 0 Parent=GSCOCT00034380001 | |
| 42712 chr10 manual_curation CDS 7844253 7844503 . - 0 Parent=GSCOCT00034380001 | |
| 42713 chr10 manual_curation CDS 7842852 7843071 . - 2 Parent=GSCOCT00034380001 | |
| 42714 chr10 manual_curation CDS 7841706 7841876 . - 0 Parent=GSCOCT00034380001 | |
| 42715 chr10 manual_curation CDS 7841522 7841599 . - 0 Parent=GSCOCT00034380001 | |
| 42716 chr10 manual_curation CDS 7838548 7838796 . - 0 Parent=GSCOCT00034380001 | |
| 42717 chr10 manual_curation CDS 7835617 7837722 . - 0 Parent=GSCOCT00034380001 | |
| 42718 chr10 manual_curation CDS 7833288 7835151 . - 0 Parent=GSCOCT00034380001 | |
| 42719 chr10 manual_curation CDS 7832790 7832884 . - 1 Parent=GSCOCT00034380001 | |
| 42720 chr10 manual_curation CDS 7831578 7831934 . - 0 Parent=GSCOCT00034380001 | |
| 42721 chr10 manual_curation CDS 7831315 7831433 . - 0 Parent=GSCOCT00034380001 | |
| 42722 chr10 manual_curation CDS 7830689 7830935 . - 2 Parent=GSCOCT00034380001 | |
| 42723 chr10 manual_curation CDS 7829813 7830037 . - 0 Parent=GSCOCT00034380001 | |
| 42724 chr10 manual_curation CDS 7828455 7828594 . - 0 Parent=GSCOCT00034380001 | |
| 42725 chr10 manual_curation CDS 7826511 7826583 . - 2 Parent=GSCOCT00034380001 | |
| 42726 chr10 manual_curation CDS 7826117 7826218 . - 0 Parent=GSCOCT00034380001 | |
| 42727 chr10 manual_curation CDS 7825846 7826028 . - 0 Parent=GSCOCT00034380001 | |
| 42728 chr10 manual_curation CDS 7825306 7825647 . - 0 Parent=GSCOCT00034380001 | |
| 42729 chr10 manual_curation CDS 7825058 7825225 . - 0 Parent=GSCOCT00034380001 | |
| 42730 chr10 manual_curation CDS 7824461 7824842 . - 0 Parent=GSCOCT00034380001 | |
| 42731 chr10 manual_curation CDS 7823992 7824101 . - 1 Parent=GSCOCT00034380001 | |
| 42732 chr10 manual_curation gene 7851594 7854462 . + . ID=GSCOCG00034379001;Name=Cc10_g08520 | |
| 42733 chr10 manual_curation mRNA 7851594 7854462 . + . ID=GSCOCT00034379001;Parent=GSCOCG00034379001;Name=Cc10_g08520 | |
| 42734 chr10 manual_curation polypeptide 7851720 7854462 . + . ID=GSCOCP00034379001;Dbxref=InterPro:IPR007146,PFAM:PF04000,SwissProt:Q2KII6,SwissProt:Q8NEJ9,SwissProt:Q9DB96,TAIR:AT1G07840.2,TAIR:AT2G43650.1,TrEMBL:A5B0C0,TrEMBL:A5BAI5,TrEMBL:F6I625;Derives_from=GSCOCT00034379001;Name=Cc10_g08520;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Neuroguidin,CC_functional_completeness:complete,CC_gene:NGDN,CC_gene:Ngdn;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034379001~ Putative Neuroguidin~ NGDN~ complete;original_location=complement(join(1209436..1209482%2C1209234..1209321%2C1208795..1208974%2C1208432..1208617%2C1208029..1208199%2C1207788..1207942%2C1207539..1207665%2C1206740..1206751));owner=coffea | |
| 42735 chr10 manual_curation exon 7854451 7854462 . + . Parent=GSCOCT00034379001 | |
| 42736 chr10 manual_curation exon 7853537 7853663 . + . Parent=GSCOCT00034379001 | |
| 42737 chr10 manual_curation exon 7853260 7853414 . + . Parent=GSCOCT00034379001 | |
| 42738 chr10 manual_curation exon 7853003 7853173 . + . Parent=GSCOCT00034379001 | |
| 42739 chr10 manual_curation exon 7852585 7852770 . + . Parent=GSCOCT00034379001 | |
| 42740 chr10 manual_curation exon 7852228 7852407 . + . Parent=GSCOCT00034379001 | |
| 42741 chr10 manual_curation exon 7851881 7851968 . + . Parent=GSCOCT00034379001 | |
| 42742 chr10 manual_curation exon 7851594 7851766 . + . Parent=GSCOCT00034379001 | |
| 42743 chr10 manual_curation CDS 7854451 7854462 . + 0 Parent=GSCOCT00034379001 | |
| 42744 chr10 manual_curation CDS 7853537 7853663 . + 2 Parent=GSCOCT00034379001 | |
| 42745 chr10 manual_curation CDS 7853260 7853414 . + 0 Parent=GSCOCT00034379001 | |
| 42746 chr10 manual_curation CDS 7853003 7853173 . + 0 Parent=GSCOCT00034379001 | |
| 42747 chr10 manual_curation CDS 7852585 7852770 . + 0 Parent=GSCOCT00034379001 | |
| 42748 chr10 manual_curation CDS 7852228 7852407 . + 0 Parent=GSCOCT00034379001 | |
| 42749 chr10 manual_curation CDS 7851881 7851968 . + 2 Parent=GSCOCT00034379001 | |
| 42750 chr10 manual_curation CDS 7851720 7851766 . + 0 Parent=GSCOCT00034379001 | |
| 42751 chr10 manual_curation gene 7869219 7875598 . - . ID=GSCOCG00034376001;Name=Cc10_g08530 | |
| 42752 chr10 manual_curation mRNA 7869219 7875598 . - . ID=GSCOCT00034376001;Parent=GSCOCG00034376001;Name=Cc10_g08530 | |
| 42753 chr10 manual_curation polypeptide 7869532 7875463 . - . ID=GSCOCP00034376001;Dbxref=SwissProt:Q550A6,SwissProt:Q55C66,SwissProt:Q9GSB0,TAIR:AT4G24460.1,TAIR:AT5G12170.2,TAIR:AT5G19380.2,TrEMBL:B9SMZ7,TrEMBL:E0CNR0,TrEMBL:I1K9T3;Derives_from=GSCOCT00034376001;Name=Cc10_g08530;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:CRT (chloroquine-resistance transporter)-like transporter 2,CC_functional_completeness:modules,CC_gene:crtp1,CC_gene:crtp3,CC_gene:crtp2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034376001~ CRT (chloroquine-resistance transporter)-like transporter 2~ crtp1~ modules;original_location=join(1185739..1186196%2C1186602..1186747%2C1187191..1187228%2C1187541..1187656%2C1188497..1188596%2C1188674..1188709%2C1188802..1188852%2C1189623..1189746%2C1191283..1191408%2C1191513..1191670);owner=coffea | |
| 42754 chr10 manual_curation exon 7875006 7875598 . - . Parent=GSCOCT00034376001 | |
| 42755 chr10 manual_curation exon 7874455 7874600 . - . Parent=GSCOCT00034376001 | |
| 42756 chr10 manual_curation exon 7873974 7874011 . - . Parent=GSCOCT00034376001 | |
| 42757 chr10 manual_curation exon 7873546 7873661 . - . Parent=GSCOCT00034376001 | |
| 42758 chr10 manual_curation exon 7872606 7872705 . - . Parent=GSCOCT00034376001 | |
| 42759 chr10 manual_curation exon 7872493 7872528 . - . Parent=GSCOCT00034376001 | |
| 42760 chr10 manual_curation exon 7872350 7872400 . - . Parent=GSCOCT00034376001 | |
| 42761 chr10 manual_curation exon 7871456 7871579 . - . Parent=GSCOCT00034376001 | |
| 42762 chr10 manual_curation exon 7869794 7869919 . - . Parent=GSCOCT00034376001 | |
| 42763 chr10 manual_curation exon 7869219 7869689 . - . Parent=GSCOCT00034376001 | |
| 42764 chr10 manual_curation CDS 7875006 7875463 . - 0 Parent=GSCOCT00034376001 | |
| 42765 chr10 manual_curation CDS 7874455 7874600 . - 2 Parent=GSCOCT00034376001 | |
| 42766 chr10 manual_curation CDS 7873974 7874011 . - 1 Parent=GSCOCT00034376001 | |
| 42767 chr10 manual_curation CDS 7873546 7873661 . - 0 Parent=GSCOCT00034376001 | |
| 42768 chr10 manual_curation CDS 7872606 7872705 . - 2 Parent=GSCOCT00034376001 | |
| 42769 chr10 manual_curation CDS 7872493 7872528 . - 0 Parent=GSCOCT00034376001 | |
| 42770 chr10 manual_curation CDS 7872350 7872400 . - 0 Parent=GSCOCT00034376001 | |
| 42771 chr10 manual_curation CDS 7871456 7871579 . - 0 Parent=GSCOCT00034376001 | |
| 42772 chr10 manual_curation CDS 7869794 7869919 . - 1 Parent=GSCOCT00034376001 | |
| 42773 chr10 manual_curation CDS 7869532 7869689 . - 1 Parent=GSCOCT00034376001 | |
| 42774 chr10 manual_curation gene 7878317 7880779 . + . ID=GSCOCG00034375001;Name=Cc10_g08540 | |
| 42775 chr10 manual_curation mRNA 7878317 7880779 . + . ID=GSCOCT00034375001;Parent=GSCOCG00034375001;Name=Cc10_g08540 | |
| 42776 chr10 manual_curation polypeptide 7878406 7880474 . + . ID=GSCOCP00034375001;Dbxref=InterPro:IPR010625,PFAM:PF06747,TAIR:AT5G09570.1,TAIR:AT5G64400.2,TrEMBL:A5BAI7,TrEMBL:D7U673,TrEMBL:E0CNR1;Derives_from=GSCOCT00034375001;Name=Cc10_g08540;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Cox19-like CHCH family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034375001~ Cox19-like CHCH family protein~ unknown_gene~ complete;original_location=complement(join(1182760..1182796%2C1181785..1181856%2C1181482..1181559%2C1181191..1181381%2C1180728..1180826));owner=coffea | |
| 42777 chr10 manual_curation exon 7880376 7880779 . + . Parent=GSCOCT00034375001 | |
| 42778 chr10 manual_curation exon 7879821 7880011 . + . Parent=GSCOCT00034375001 | |
| 42779 chr10 manual_curation exon 7879643 7879720 . + . Parent=GSCOCT00034375001 | |
| 42780 chr10 manual_curation exon 7879346 7879417 . + . Parent=GSCOCT00034375001 | |
| 42781 chr10 manual_curation exon 7878317 7878442 . + . Parent=GSCOCT00034375001 | |
| 42782 chr10 manual_curation CDS 7880376 7880474 . + 0 Parent=GSCOCT00034375001 | |
| 42783 chr10 manual_curation CDS 7879821 7880011 . + 1 Parent=GSCOCT00034375001 | |
| 42784 chr10 manual_curation CDS 7879643 7879720 . + 1 Parent=GSCOCT00034375001 | |
| 42785 chr10 manual_curation CDS 7879346 7879417 . + 1 Parent=GSCOCT00034375001 | |
| 42786 chr10 manual_curation CDS 7878406 7878442 . + 0 Parent=GSCOCT00034375001 | |
| 42787 chr10 manual_curation gene 7885440 7886324 . - . ID=GSCOCG00034374001;Name=Cc10_g08550 | |
| 42788 chr10 manual_curation mRNA 7885440 7886324 . - . ID=GSCOCT00034374001;Parent=GSCOCG00034374001;Name=Cc10_g08550 | |
| 42789 chr10 manual_curation polypeptide 7885962 7886324 . - . ID=GSCOCP00034374001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR002085,InterPro:IPR016040,PANTHER:PTHR11695,SwissProt:O65621,SwissProt:P93257,SwissProt:Q9ZRF1,TAIR:AT4G37970.1,TAIR:AT4G37980.1,TAIR:AT4G39330.1,TrEMBL:B9GFP9,TrEMBL:D7TRS2,TrEMBL:D7TRT6;Derives_from=GSCOCT00034374001;Name=Cc10_g08550;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,GO:0008270,GO:0016491,GO:0055114,CC_EC_number:1.1.1.255,PRODUCT:Probable mannitol dehydrogenase,CC_functional_completeness:fragment,CC_gene:CAD,CC_gene:CAD6,CC_gene:ELI3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034374001~ Probable mannitol dehydrogenase~ CAD~ fragment;original_location=1174878..1175240;owner=coffea | |
| 42790 chr10 manual_curation exon 7885440 7886324 . - . Parent=GSCOCT00034374001 | |
| 42791 chr10 manual_curation CDS 7885962 7886324 . - 0 Parent=GSCOCT00034374001 | |
| 42792 chr10 manual_curation gene 7889783 7894152 . + . ID=GSCOCG00034373001;Name=Cc10_g08560 | |
| 42793 chr10 manual_curation mRNA 7889783 7894152 . + . ID=GSCOCT00034373001;Parent=GSCOCG00034373001;Name=Cc10_g08560 | |
| 42794 chr10 manual_curation polypeptide 7892737 7893906 . + . ID=GSCOCP00034373001;Dbxref=InterPro:IPR015270,PFAM:PF09187,SUPERFAMILY:SSF109920,SwissProt:Q9LUJ3,TAIR:AT3G22680.1,TrEMBL:B9HK00,TrEMBL:B9RTM4,TrEMBL:D7T717;Derives_from=GSCOCT00034373001;Name=Cc10_g08560;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein RDM1,CC_functional_completeness:complete,CC_gene:RDM1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034373001~ Protein RDM1~ RDM1~ complete;original_location=complement(join(1168324..1168465%2C1167296..1167678));owner=coffea | |
| 42795 chr10 manual_curation exon 7890082 7890142 . + . Parent=GSCOCT00034373001 | |
| 42796 chr10 manual_curation exon 7889783 7889917 . + . Parent=GSCOCT00034373001 | |
| 42797 chr10 manual_curation exon 7893524 7894152 . + . Parent=GSCOCT00034373001 | |
| 42798 chr10 manual_curation exon 7892729 7892878 . + . Parent=GSCOCT00034373001 | |
| 42799 chr10 manual_curation CDS 7893524 7893906 . + 1 Parent=GSCOCT00034373001 | |
| 42800 chr10 manual_curation CDS 7892737 7892878 . + 0 Parent=GSCOCT00034373001 | |
| 42801 chr10 manual_curation gene 7898920 7904154 . + . ID=GSCOCG00034371001;Name=Cc10_g08570 | |
| 42802 chr10 manual_curation mRNA 7898920 7904154 . + . ID=GSCOCT00034371001;Parent=GSCOCG00034371001;Name=Cc10_g08570 | |
| 42803 chr10 manual_curation polypeptide 7898920 7904154 . + . ID=GSCOCP00034371001;Dbxref=GENE3D:G3DSA:2.130.10.80,InterPro:IPR009880,InterPro:IPR011043,InterPro:IPR015916,PFAM:PF07250,SUPERFAMILY:SSF50965,TAIR:AT1G14430.1,TAIR:AT1G19900.1,TAIR:AT1G75620.1,TrEMBL:B9GQZ2,TrEMBL:F6GZR4,TrEMBL:G9JJS5;Derives_from=GSCOCT00034371001;Name=Cc10_g08570;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:glyoxal oxidase-related protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034371001~ glyoxal oxidase-related protein~ unknown_gene~ fragment;original_location=complement(join(1162179..1162282%2C1157646..1157668%2C1157048..1157445));owner=coffea | |
| 42804 chr10 manual_curation exon 7903757 7904154 . + . Parent=GSCOCT00034371001 | |
| 42805 chr10 manual_curation exon 7903534 7903556 . + . Parent=GSCOCT00034371001 | |
| 42806 chr10 manual_curation exon 7898920 7899023 . + . Parent=GSCOCT00034371001 | |
| 42807 chr10 manual_curation CDS 7903757 7904154 . + 1 Parent=GSCOCT00034371001 | |
| 42808 chr10 manual_curation CDS 7903534 7903556 . + 2 Parent=GSCOCT00034371001 | |
| 42809 chr10 manual_curation CDS 7898920 7899023 . + 0 Parent=GSCOCT00034371001 | |
| 42810 chr10 manual_curation gene 7906538 7910925 . - . ID=GSCOCG00034369001;Name=Cc10_g08580 | |
| 42811 chr10 manual_curation mRNA 7906538 7910925 . - . ID=GSCOCT00034369001;Parent=GSCOCG00034369001;Name=Cc10_g08580 | |
| 42812 chr10 manual_curation polypeptide 7906795 7910556 . - . ID=GSCOCP00034369001;Dbxref=TAIR:AT4G10080.1,TAIR:AT4G13530.1,TrEMBL:B9MWK0,TrEMBL:B9SHN5,TrEMBL:F6HMX7;Derives_from=GSCOCT00034369001;Name=Cc10_g08580;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034369001~ Putative unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10080.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(1150646..1151524%2C1154276..1154407);owner=coffea | |
| 42813 chr10 manual_curation exon 7909678 7910925 . - . Parent=GSCOCT00034369001 | |
| 42814 chr10 manual_curation exon 7906538 7906926 . - . Parent=GSCOCT00034369001 | |
| 42815 chr10 manual_curation CDS 7909678 7910556 . - 0 Parent=GSCOCT00034369001 | |
| 42816 chr10 manual_curation CDS 7906795 7906926 . - 0 Parent=GSCOCT00034369001 | |
| 42817 chr10 manual_curation gene 7925952 7928255 . - . ID=GSCOCG00034368001;Name=Cc10_g08590 | |
| 42818 chr10 manual_curation mRNA 7925952 7928255 . - . ID=GSCOCT00034368001;Parent=GSCOCG00034368001;Name=Cc10_g08590 | |
| 42819 chr10 manual_curation polypeptide 7925952 7928255 . - . ID=GSCOCP00034368001;Dbxref=GENE3D:G3DSA:3.60.40.10,InterPro:IPR001932,InterPro:IPR014045,InterPro:IPR015655,PANTHER:PTHR13832,PFAM:PF00481,SMART:SM00332,SUPERFAMILY:SSF81606,SwissProt:Q2QWE3,SwissProt:Q53Q11,SwissProt:Q8RX37,TAIR:AT1G07160.1,TAIR:AT2G30020.1,TAIR:AT2G40180.1,TrEMBL:B9IQ91,TrEMBL:B9SHN9,TrEMBL:F6HMX9;Derives_from=GSCOCT00034368001;Name=Cc10_g08590;Ontology_term=CC_evidence_code:ISS,GO:0003824,CC_EC_number:3.1.3.16,PRODUCT:Putative Probable protein phosphatase 2C 74,CC_functional_completeness:modules,CC_gene:At1g07160,CC_gene:Os11g0242200,CC_gene:Os12g0198200;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034368001~ Putative Probable protein phosphatase 2C 74~ At1g07160~ modules;original_location=join(1132947..1133498%2C1133746..1133919%2C1134502..1134672%2C1134791..1134970%2C1135104..1135250);owner=coffea | |
| 42820 chr10 manual_curation exon 7927704 7928255 . - . Parent=GSCOCT00034368001 | |
| 42821 chr10 manual_curation exon 7927283 7927456 . - . Parent=GSCOCT00034368001 | |
| 42822 chr10 manual_curation exon 7926530 7926700 . - . Parent=GSCOCT00034368001 | |
| 42823 chr10 manual_curation exon 7926232 7926411 . - . Parent=GSCOCT00034368001 | |
| 42824 chr10 manual_curation exon 7925952 7926098 . - . Parent=GSCOCT00034368001 | |
| 42825 chr10 manual_curation CDS 7927704 7928255 . - 0 Parent=GSCOCT00034368001 | |
| 42826 chr10 manual_curation CDS 7927283 7927456 . - 0 Parent=GSCOCT00034368001 | |
| 42827 chr10 manual_curation CDS 7926530 7926700 . - 0 Parent=GSCOCT00034368001 | |
| 42828 chr10 manual_curation CDS 7926232 7926411 . - 0 Parent=GSCOCT00034368001 | |
| 42829 chr10 manual_curation CDS 7925952 7926098 . - 0 Parent=GSCOCT00034368001 | |
| 42830 chr10 manual_curation gene 7950878 7956242 . + . ID=GSCOCG00034367001;Name=Cc10_g08600 | |
| 42831 chr10 manual_curation mRNA 7950878 7956242 . + . ID=GSCOCT00034367001;Parent=GSCOCG00034367001;Name=Cc10_g08600 | |
| 42832 chr10 manual_curation polypeptide 7950878 7956242 . + . ID=GSCOCP00034367001;Dbxref=GENE3D:G3DSA:3.90.280.10,InterPro:IPR001858,InterPro:IPR008914,PFAM:PF01161,PROSITE:PS01220,SUPERFAMILY:SSF49777,SwissProt:Q8VWH2,SwissProt:Q93WI9,SwissProt:Q9SXZ2,TAIR:AT1G65480.1,TAIR:AT4G20370.1,TAIR:AT5G62040.1,TrEMBL:A1BQ40,TrEMBL:A3F5C4,TrEMBL:F6K0U4;Derives_from=GSCOCT00034367001;Name=Cc10_g08600;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein HEADING DATE 3A,CC_functional_completeness:modules,CC_gene:HD3A,CC_gene:HD3B,CC_gene:FT;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034367001~ Protein HEADING DATE 3A~ HD3A~ modules;original_location=complement(join(1110001..1110324%2C1109151..1109212%2C1106711..1106751%2C1104960..1105186));owner=coffea | |
| 42833 chr10 manual_curation exon 7956016 7956242 . + . Parent=GSCOCT00034367001 | |
| 42834 chr10 manual_curation exon 7954451 7954491 . + . Parent=GSCOCT00034367001 | |
| 42835 chr10 manual_curation exon 7951990 7952051 . + . Parent=GSCOCT00034367001 | |
| 42836 chr10 manual_curation exon 7950878 7951201 . + . Parent=GSCOCT00034367001 | |
| 42837 chr10 manual_curation CDS 7956016 7956242 . + 1 Parent=GSCOCT00034367001 | |
| 42838 chr10 manual_curation CDS 7954451 7954491 . + 2 Parent=GSCOCT00034367001 | |
| 42839 chr10 manual_curation CDS 7951990 7952051 . + 0 Parent=GSCOCT00034367001 | |
| 42840 chr10 manual_curation CDS 7950878 7951201 . + 0 Parent=GSCOCT00034367001 | |
| 42841 chr10 manual_curation gene 7969549 7972975 . + . ID=GSCOCG00034366001;Name=Cc10_g08610 | |
| 42842 chr10 manual_curation mRNA 7969549 7972975 . + . ID=GSCOCT00034366001;Parent=GSCOCG00034366001;Name=Cc10_g08610 | |
| 42843 chr10 manual_curation polypeptide 7969549 7972975 . + . ID=GSCOCP00034366001;Dbxref=GENE3D:G3DSA:2.60.120.200,InterPro:IPR000757,InterPro:IPR008985,InterPro:IPR010713,InterPro:IPR013320,InterPro:IPR016455,PFAM:PF00722,PFAM:PF06955,PIR:PIRSF005604,SUPERFAMILY:SSF49899,SwissProt:Q9LJR7,SwissProt:Q9SV60,SwissProt:Q9SV61,TAIR:AT3G25050.1,TAIR:AT4G13080.1,TAIR:AT4G13090.1,TrEMBL:B9GQJ9,TrEMBL:B9S507,TrEMBL:I1N264;Derives_from=GSCOCT00034366001;Name=Cc10_g08610;Ontology_term=CC_evidence_code:ISS,GO:0005618,GO:0005975,GO:0006073,GO:0016762,GO:0048046,CC_EC_number:2.4.1.207,PRODUCT:Putative Xyloglucan endotransglucosylase/hydrolase protein 2,CC_functional_completeness:complete,CC_gene:XTH2,CC_gene:XTH1,CC_gene:XTH3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034366001~ Putative Xyloglucan endotransglucosylase/hydrolase protein 2~ XTH2~ complete;original_location=complement(join(1091482..1091653%2C1091117..1091217%2C1090786..1090997%2C1088227..1088590));owner=coffea | |
| 42844 chr10 manual_curation exon 7972612 7972975 . + . Parent=GSCOCT00034366001 | |
| 42845 chr10 manual_curation exon 7970205 7970416 . + . Parent=GSCOCT00034366001 | |
| 42846 chr10 manual_curation exon 7969985 7970085 . + . Parent=GSCOCT00034366001 | |
| 42847 chr10 manual_curation exon 7969549 7969720 . + . Parent=GSCOCT00034366001 | |
| 42848 chr10 manual_curation CDS 7972612 7972975 . + 2 Parent=GSCOCT00034366001 | |
| 42849 chr10 manual_curation CDS 7970205 7970416 . + 0 Parent=GSCOCT00034366001 | |
| 42850 chr10 manual_curation CDS 7969985 7970085 . + 1 Parent=GSCOCT00034366001 | |
| 42851 chr10 manual_curation CDS 7969549 7969720 . + 0 Parent=GSCOCT00034366001 | |
| 42852 chr10 manual_curation gene 7973937 7975446 . - . ID=GSCOCG00034365001;Name=Cc10_g08620 | |
| 42853 chr10 manual_curation mRNA 7973937 7975446 . - . ID=GSCOCT00034365001;Parent=GSCOCG00034365001;Name=Cc10_g08620 | |
| 42854 chr10 manual_curation polypeptide 7973937 7975446 . - . ID=GSCOCP00034365001;Dbxref=GENE3D:G3DSA:2.60.120.200,InterPro:IPR000757,InterPro:IPR008264,InterPro:IPR008985,InterPro:IPR010713,InterPro:IPR013320,PFAM:PF00722,PFAM:PF06955,PRINTS:PR00737,SUPERFAMILY:SSF49899,SwissProt:Q9LJR7,SwissProt:Q9SV60,SwissProt:Q9SV61,TAIR:AT3G25050.1,TAIR:AT4G13080.1,TAIR:AT4G13090.1,TrEMBL:A5BLS4,TrEMBL:B9S507,TrEMBL:I1N264;Derives_from=GSCOCT00034365001;Name=Cc10_g08620;Ontology_term=CC_evidence_code:ISS,GO:0005618,GO:0005975,GO:0006073,GO:0016762,GO:0048046,CC_EC_number:2.4.1.207,PRODUCT:Putative Xyloglucan endotransglucosylase/hydrolase protein 2,CC_functional_completeness:complete,CC_gene:XTH2,CC_gene:XTH3,CC_gene:XTH1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034365001~ Putative Xyloglucan endotransglucosylase/hydrolase protein 2~ XTH2~ complete;original_location=join(1085756..1085927%2C1086214..1086314%2C1086375..1086387%2C1086449..1086632%2C1086902..1087110%2C1087159..1087265);owner=coffea | |
| 42855 chr10 manual_curation exon 7975275 7975446 . - . Parent=GSCOCT00034365001 | |
| 42856 chr10 manual_curation exon 7974888 7974988 . - . Parent=GSCOCT00034365001 | |
| 42857 chr10 manual_curation exon 7974815 7974827 . - . Parent=GSCOCT00034365001 | |
| 42858 chr10 manual_curation exon 7974570 7974753 . - . Parent=GSCOCT00034365001 | |
| 42859 chr10 manual_curation exon 7974092 7974300 . - . Parent=GSCOCT00034365001 | |
| 42860 chr10 manual_curation exon 7973937 7974043 . - . Parent=GSCOCT00034365001 | |
| 42861 chr10 manual_curation CDS 7975275 7975446 . - 0 Parent=GSCOCT00034365001 | |
| 42862 chr10 manual_curation CDS 7974888 7974988 . - 1 Parent=GSCOCT00034365001 | |
| 42863 chr10 manual_curation CDS 7974815 7974827 . - 0 Parent=GSCOCT00034365001 | |
| 42864 chr10 manual_curation CDS 7974570 7974753 . - 1 Parent=GSCOCT00034365001 | |
| 42865 chr10 manual_curation CDS 7974092 7974300 . - 2 Parent=GSCOCT00034365001 | |
| 42866 chr10 manual_curation CDS 7973937 7974043 . - 1 Parent=GSCOCT00034365001 | |
| 42867 chr10 manual_curation gene 7980792 7991883 . + . ID=GSCOCG00034364001;Name=Cc10_g08630 | |
| 42868 chr10 manual_curation mRNA 7980792 7991883 . + . ID=GSCOCT00034364001;Parent=GSCOCG00034364001;Name=Cc10_g08630 | |
| 42869 chr10 manual_curation polypeptide 7981028 7991500 . + . ID=GSCOCP00034364001;Dbxref=GENE3D:G3DSA:3.40.1160.10,GENE3D:G3DSA:3.40.50.720,InterPro:IPR001048,InterPro:IPR001341,InterPro:IPR001342,InterPro:IPR002912,InterPro:IPR005106,InterPro:IPR011147,InterPro:IPR016040,InterPro:IPR018042,InterPro:IPR019811,PFAM:PF00696,PFAM:PF00742,PFAM:PF01842,PFAM:PF03447,PIR:PIRSF000727,PROSITE:PS00324,PROSITE:PS01042,SUPERFAMILY:SSF53633,SwissProt:O81852,SwissProt:P37142,SwissProt:Q9SA18,TAIR:AT1G31230.1,TAIR:AT4G19710.2,TAIR:AT5G21060.2,TIGRFAMs:TIGR00657,TrEMBL:B9MWJ3,TrEMBL:I1K3R3,TrEMBL:I1KS56;Derives_from=GSCOCT00034364001;Name=Cc10_g08630;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004072,GO:0004412,GO:0005488,GO:0006520,GO:0008152,GO:0008652,GO:0009067,GO:0016491,GO:0016597,GO:0050661,GO:0055114,CC_EC_number:2.7.2.4,CC_EC_number:2.7.2.4,CC_EC_number:2.7.2.4,PRODUCT:Bifunctional aspartokinase/homoserine dehydrogenase%2C chloroplastic (Fragment),CC_functional_completeness:complete,CC_gene:AKHSDH2,CC_gene:AKHSDH1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034364001~ Bifunctional aspartokinase/homoserine dehydrogenase%2C chloroplastic (Fragment)~ AKHSDH2~ complete;original_location=complement(join(1080068..1080174%2C1079603..1079676%2C1079137..1079514%2C1078210..1078298%2C1077760..1078063%2C1077474..1077526%2C1077171..1077385%2C1077003..1077090%2C1076777..1076890%2C1075774..1075872%2C1075241..1075435%2C1073240..1073322%2C1072120..1072345%2C1071587..1071732%2C1070966..1071101%2C1070582..1070665%2C1070376..1070468%2C1069702..1069947));owner=coffea | |
| 42870 chr10 manual_curation exon 7991255 7991883 . + . Parent=GSCOCT00034364001 | |
| 42871 chr10 manual_curation exon 7990734 7990826 . + . Parent=GSCOCT00034364001 | |
| 42872 chr10 manual_curation exon 7990537 7990620 . + . Parent=GSCOCT00034364001 | |
| 42873 chr10 manual_curation exon 7990101 7990236 . + . Parent=GSCOCT00034364001 | |
| 42874 chr10 manual_curation exon 7989470 7989615 . + . Parent=GSCOCT00034364001 | |
| 42875 chr10 manual_curation exon 7988857 7989082 . + . Parent=GSCOCT00034364001 | |
| 42876 chr10 manual_curation exon 7987880 7987962 . + . Parent=GSCOCT00034364001 | |
| 42877 chr10 manual_curation exon 7985767 7985961 . + . Parent=GSCOCT00034364001 | |
| 42878 chr10 manual_curation exon 7985330 7985428 . + . Parent=GSCOCT00034364001 | |
| 42879 chr10 manual_curation exon 7984312 7984425 . + . Parent=GSCOCT00034364001 | |
| 42880 chr10 manual_curation exon 7984112 7984199 . + . Parent=GSCOCT00034364001 | |
| 42881 chr10 manual_curation exon 7983817 7984031 . + . Parent=GSCOCT00034364001 | |
| 42882 chr10 manual_curation exon 7983676 7983728 . + . Parent=GSCOCT00034364001 | |
| 42883 chr10 manual_curation exon 7983139 7983442 . + . Parent=GSCOCT00034364001 | |
| 42884 chr10 manual_curation exon 7982904 7982992 . + . Parent=GSCOCT00034364001 | |
| 42885 chr10 manual_curation exon 7981688 7982065 . + . Parent=GSCOCT00034364001 | |
| 42886 chr10 manual_curation exon 7981526 7981599 . + . Parent=GSCOCT00034364001 | |
| 42887 chr10 manual_curation exon 7980792 7981134 . + . Parent=GSCOCT00034364001 | |
| 42888 chr10 manual_curation CDS 7991255 7991500 . + 0 Parent=GSCOCT00034364001 | |
| 42889 chr10 manual_curation CDS 7990734 7990826 . + 0 Parent=GSCOCT00034364001 | |
| 42890 chr10 manual_curation CDS 7990537 7990620 . + 0 Parent=GSCOCT00034364001 | |
| 42891 chr10 manual_curation CDS 7990101 7990236 . + 2 Parent=GSCOCT00034364001 | |
| 42892 chr10 manual_curation CDS 7989470 7989615 . + 0 Parent=GSCOCT00034364001 | |
| 42893 chr10 manual_curation CDS 7988857 7989082 . + 2 Parent=GSCOCT00034364001 | |
| 42894 chr10 manual_curation CDS 7987880 7987962 . + 0 Parent=GSCOCT00034364001 | |
| 42895 chr10 manual_curation CDS 7985767 7985961 . + 0 Parent=GSCOCT00034364001 | |
| 42896 chr10 manual_curation CDS 7985330 7985428 . + 0 Parent=GSCOCT00034364001 | |
| 42897 chr10 manual_curation CDS 7984312 7984425 . + 0 Parent=GSCOCT00034364001 | |
| 42898 chr10 manual_curation CDS 7984112 7984199 . + 2 Parent=GSCOCT00034364001 | |
| 42899 chr10 manual_curation CDS 7983817 7984031 . + 0 Parent=GSCOCT00034364001 | |
| 42900 chr10 manual_curation CDS 7983676 7983728 . + 1 Parent=GSCOCT00034364001 | |
| 42901 chr10 manual_curation CDS 7983139 7983442 . + 0 Parent=GSCOCT00034364001 | |
| 42902 chr10 manual_curation CDS 7982904 7982992 . + 1 Parent=GSCOCT00034364001 | |
| 42903 chr10 manual_curation CDS 7981688 7982065 . + 1 Parent=GSCOCT00034364001 | |
| 42904 chr10 manual_curation CDS 7981526 7981599 . + 2 Parent=GSCOCT00034364001 | |
| 42905 chr10 manual_curation CDS 7981028 7981134 . + 0 Parent=GSCOCT00034364001 | |
| 42906 chr10 manual_curation gene 7992357 7994054 . - . ID=GSCOCG00034363001;Name=Cc10_g08640 | |
| 42907 chr10 manual_curation mRNA 7992357 7994054 . - . ID=GSCOCT00034363001;Parent=GSCOCG00034363001;Name=Cc10_g08640 | |
| 42908 chr10 manual_curation polypeptide 7992357 7994034 . - . ID=GSCOCP00034363001;Dbxref=InterPro:IPR010994,SUPERFAMILY:SSF47781,TAIR:AT1G12790.1,TrEMBL:B9GGV5,TrEMBL:B9SHP3,TrEMBL:F6HMY0;Derives_from=GSCOCT00034363001;Name=Cc10_g08640;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:CONTAINS InterPro DOMAIN/s,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034363001~ CONTAINS InterPro DOMAIN/s: RuvA domain 2-like (InterPro:IPR010994)%3B Has 29 Blast hits to 29 proteins in 9 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 0%3B Fungi - 0%3B Plants - 27%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(1067168..1067275%2C1067350..1067438%2C1067510..1067605%2C1067701..1067795%2C1067871..1067911%2C1067995..1068078%2C1068696..1068845);owner=coffea | |
| 42909 chr10 manual_curation exon 7993927 7994054 . - . Parent=GSCOCT00034363001 | |
| 42910 chr10 manual_curation exon 7993764 7993852 . - . Parent=GSCOCT00034363001 | |
| 42911 chr10 manual_curation exon 7993597 7993692 . - . Parent=GSCOCT00034363001 | |
| 42912 chr10 manual_curation exon 7993407 7993501 . - . Parent=GSCOCT00034363001 | |
| 42913 chr10 manual_curation exon 7993291 7993331 . - . Parent=GSCOCT00034363001 | |
| 42914 chr10 manual_curation exon 7993124 7993207 . - . Parent=GSCOCT00034363001 | |
| 42915 chr10 manual_curation exon 7992357 7992506 . - . Parent=GSCOCT00034363001 | |
| 42916 chr10 manual_curation CDS 7993927 7994034 . - 0 Parent=GSCOCT00034363001 | |
| 42917 chr10 manual_curation CDS 7993764 7993852 . - 0 Parent=GSCOCT00034363001 | |
| 42918 chr10 manual_curation CDS 7993597 7993692 . - 2 Parent=GSCOCT00034363001 | |
| 42919 chr10 manual_curation CDS 7993407 7993501 . - 2 Parent=GSCOCT00034363001 | |
| 42920 chr10 manual_curation CDS 7993291 7993331 . - 1 Parent=GSCOCT00034363001 | |
| 42921 chr10 manual_curation CDS 7993124 7993207 . - 0 Parent=GSCOCT00034363001 | |
| 42922 chr10 manual_curation CDS 7992357 7992506 . - 0 Parent=GSCOCT00034363001 | |
| 42923 chr10 manual_curation gene 7996440 7998762 . + . ID=GSCOCG00034362001;Name=Cc10_g08650 | |
| 42924 chr10 manual_curation mRNA 7996440 7998762 . + . ID=GSCOCT00034362001;Parent=GSCOCG00034362001;Name=Cc10_g08650 | |
| 42925 chr10 manual_curation polypeptide 7996493 7998325 . + . ID=GSCOCP00034362001;Dbxref=TrEMBL:B9IQ93,TrEMBL:D7TL80,TrEMBL:I1KZ91;Derives_from=GSCOCT00034362001;Name=Cc10_g08650;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034362001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=complement(join(1064657..1064709%2C1064450..1064555%2C1062877..1063083));owner=coffea | |
| 42926 chr10 manual_curation exon 7998119 7998762 . + . Parent=GSCOCT00034362001 | |
| 42927 chr10 manual_curation exon 7996647 7996752 . + . Parent=GSCOCT00034362001 | |
| 42928 chr10 manual_curation exon 7996440 7996545 . + . Parent=GSCOCT00034362001 | |
| 42929 chr10 manual_curation CDS 7998119 7998325 . + 0 Parent=GSCOCT00034362001 | |
| 42930 chr10 manual_curation CDS 7996647 7996752 . + 2 Parent=GSCOCT00034362001 | |
| 42931 chr10 manual_curation CDS 7996493 7996545 . + 0 Parent=GSCOCT00034362001 | |
| 42932 chr10 manual_curation gene 7999385 8004862 . + . ID=GSCOCG00034361001;Name=Cc10_g08660 | |
| 42933 chr10 manual_curation mRNA 7999385 8004862 . + . ID=GSCOCT00034361001;Parent=GSCOCG00034361001;Name=Cc10_g08660 | |
| 42934 chr10 manual_curation polypeptide 7999628 8004554 . + . ID=GSCOCP00034361001;Dbxref=InterPro:IPR015414,PFAM:PF09335,SwissProt:P76219,SwissProt:Q55909,TAIR:AT1G03260.1,TAIR:AT1G22850.1,TAIR:AT5G19070.1,TrEMBL:A9PH39,TrEMBL:B9SHP5,TrEMBL:F6HMY3;Derives_from=GSCOCT00034361001;Name=Cc10_g08660;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative TVP38/TMEM64 family membrane protein slr0305,CC_functional_completeness:modules,CC_gene:slr0305,CC_gene:ydjX;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034361001~ Putative TVP38/TMEM64 family membrane protein slr0305~ slr0305~ modules;original_location=complement(join(1061085..1061574%2C1059785..1059837%2C1058978..1059070%2C1058681..1058904%2C1057589..1057655%2C1056791..1056901%2C1056648..1056671));owner=coffea | |
| 42935 chr10 manual_curation exon 8004531 8004862 . + . Parent=GSCOCT00034361001 | |
| 42936 chr10 manual_curation exon 8004301 8004411 . + . Parent=GSCOCT00034361001 | |
| 42937 chr10 manual_curation exon 8003547 8003613 . + . Parent=GSCOCT00034361001 | |
| 42938 chr10 manual_curation exon 8002298 8002521 . + . Parent=GSCOCT00034361001 | |
| 42939 chr10 manual_curation exon 8002132 8002224 . + . Parent=GSCOCT00034361001 | |
| 42940 chr10 manual_curation exon 8001365 8001417 . + . Parent=GSCOCT00034361001 | |
| 42941 chr10 manual_curation exon 7999385 8000117 . + . Parent=GSCOCT00034361001 | |
| 42942 chr10 manual_curation CDS 8004531 8004554 . + 0 Parent=GSCOCT00034361001 | |
| 42943 chr10 manual_curation CDS 8004301 8004411 . + 0 Parent=GSCOCT00034361001 | |
| 42944 chr10 manual_curation CDS 8003547 8003613 . + 2 Parent=GSCOCT00034361001 | |
| 42945 chr10 manual_curation CDS 8002298 8002521 . + 0 Parent=GSCOCT00034361001 | |
| 42946 chr10 manual_curation CDS 8002132 8002224 . + 0 Parent=GSCOCT00034361001 | |
| 42947 chr10 manual_curation CDS 8001365 8001417 . + 1 Parent=GSCOCT00034361001 | |
| 42948 chr10 manual_curation CDS 7999628 8000117 . + 0 Parent=GSCOCT00034361001 | |
| 42949 chr10 manual_curation gene 8005710 8006701 . + . ID=GSCOCG00034360001;Name=Cc10_g08670 | |
| 42950 chr10 manual_curation mRNA 8005710 8006701 . + . ID=GSCOCT00034360001;Parent=GSCOCG00034360001;Name=Cc10_g08670 | |
| 42951 chr10 manual_curation polypeptide 8005739 8006701 . + . ID=GSCOCP00034360001;Dbxref=InterPro:IPR009902,PFAM:PF07279,TAIR:AT2G45360.1,TAIR:AT3G60780.1,TrEMBL:A5BZG9,TrEMBL:B9SHP6,TrEMBL:D7TL86;Derives_from=GSCOCT00034360001;Name=Cc10_g08670;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of unknown function (DUF1442),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034360001~ Putative Protein of unknown function (DUF1442)~ unknown_gene~ complete;original_location=complement(join(1055410..1055463%2C1054501..1055118));owner=coffea | |
| 42952 chr10 manual_curation exon 8006084 8006701 . + . Parent=GSCOCT00034360001 | |
| 42953 chr10 manual_curation exon 8005710 8005792 . + . Parent=GSCOCT00034360001 | |
| 42954 chr10 manual_curation CDS 8006084 8006701 . + 0 Parent=GSCOCT00034360001 | |
| 42955 chr10 manual_curation CDS 8005739 8005792 . + 0 Parent=GSCOCT00034360001 | |
| 42956 chr10 manual_curation gene 8009900 8015032 . + . ID=GSCOCG00034359001;Name=Cc10_g08680 | |
| 42957 chr10 manual_curation mRNA 8009900 8015032 . + . ID=GSCOCT00034359001;Parent=GSCOCG00034359001;Name=Cc10_g08680 | |
| 42958 chr10 manual_curation polypeptide 8009981 8015032 . + . ID=GSCOCP00034359001;Dbxref=InterPro:IPR000109,InterPro:IPR016196,InterPro:IPR018456,PFAM:PF00854,PROSITE:PS01022,SUPERFAMILY:SSF103473,SwissProt:Q0WSZ6,SwissProt:Q8VZE2,SwissProt:Q9M1I2,TAIR:AT1G72120.1,TAIR:AT1G72125.1,TAIR:AT3G54450.1,TrEMBL:B9GM07,TrEMBL:B9RGA9,TrEMBL:F6I5R4;Derives_from=GSCOCT00034359001;Name=Cc10_g08680;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006857,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Probable peptide/nitrate transporter At3g54450,CC_functional_completeness:complete,CC_gene:At3g54450,CC_gene:At1g72120,CC_gene:At1g72125;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034359001~ Probable peptide/nitrate transporter At3g54450~ At3g54450~ complete;original_location=complement(join(1051161..1051221%2C1050816..1051033%2C1049551..1050113%2C1046318..1047165%2C1046170..1046201));owner=coffea | |
| 42959 chr10 manual_curation exon 8015001 8015032 . + . Parent=GSCOCT00034359001 | |
| 42960 chr10 manual_curation exon 8014037 8014884 . + . Parent=GSCOCT00034359001 | |
| 42961 chr10 manual_curation exon 8011089 8011651 . + . Parent=GSCOCT00034359001 | |
| 42962 chr10 manual_curation exon 8010169 8010386 . + . Parent=GSCOCT00034359001 | |
| 42963 chr10 manual_curation exon 8009900 8010041 . + . Parent=GSCOCT00034359001 | |
| 42964 chr10 manual_curation CDS 8015001 8015032 . + 1 Parent=GSCOCT00034359001 | |
| 42965 chr10 manual_curation CDS 8014037 8014884 . + 2 Parent=GSCOCT00034359001 | |
| 42966 chr10 manual_curation CDS 8011089 8011651 . + 0 Parent=GSCOCT00034359001 | |
| 42967 chr10 manual_curation CDS 8010169 8010386 . + 1 Parent=GSCOCT00034359001 | |
| 42968 chr10 manual_curation CDS 8009981 8010041 . + 0 Parent=GSCOCT00034359001 | |
| 42969 chr10 manual_curation gene 8026939 8027229 . + . ID=GSCOCG00034358001;Name=Cc10_g08690 | |
| 42970 chr10 manual_curation mRNA 8026939 8027229 . + . ID=GSCOCT00034358001;Parent=GSCOCG00034358001;Name=Cc10_g08690 | |
| 42971 chr10 manual_curation polypeptide 8026939 8027229 . + . ID=GSCOCP00034358001;Dbxref=InterPro:IPR008011,PFAM:PF05347,TAIR:AT2G39725.1,TrEMBL:B9GM83,TrEMBL:F6HMZ0,TrEMBL:Q6Z1L4;Derives_from=GSCOCT00034358001;Name=Cc10_g08690;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:LYR family of Fe/S cluster biogenesis protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034358001~ LYR family of Fe/S cluster biogenesis protein~ unknown_gene~ complete;original_location=complement(1033973..1034263);owner=coffea | |
| 42972 chr10 manual_curation exon 8026939 8027229 . + . Parent=GSCOCT00034358001 | |
| 42973 chr10 manual_curation CDS 8026939 8027229 . + 0 Parent=GSCOCT00034358001 | |
| 42974 chr10 manual_curation gene 8056715 8057050 . + . ID=GSCOCG00034354001;Name=Cc10_g08700 | |
| 42975 chr10 manual_curation mRNA 8056715 8057050 . + . ID=GSCOCT00034354001;Parent=GSCOCG00034354001;Name=Cc10_g08700 | |
| 42976 chr10 manual_curation polypeptide 8056715 8057050 . + . ID=GSCOCP00034354001;Dbxref=SwissProt:O23624,SwissProt:O24340,SwissProt:Q9LXB5,TAIR:AT4G31380.1,TAIR:AT5G10625.1,TAIR:AT5G24860.1,TrEMBL:B9N6A8,TrEMBL:B9NA04,TrEMBL:C6T3W9;Derives_from=GSCOCT00034354001;Name=Cc10_g08700;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Flowering-promoting factor 1,CC_functional_completeness:complete,CC_gene:FPF1,CC_gene:FLP2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034354001~ Flowering-promoting factor 1~ FPF1~ complete;original_location=complement(1004152..1004487);owner=coffea | |
| 42977 chr10 manual_curation exon 8056715 8057050 . + . Parent=GSCOCT00034354001 | |
| 42978 chr10 manual_curation CDS 8056715 8057050 . + 0 Parent=GSCOCT00034354001 | |
| 42979 chr10 manual_curation gene 8085307 8093245 . + . ID=GSCOCG00034352001;Name=Cc10_g08710 | |
| 42980 chr10 manual_curation mRNA 8085307 8093245 . + . ID=GSCOCT00034352001;Parent=GSCOCG00034352001;Name=Cc10_g08710 | |
| 42981 chr10 manual_curation polypeptide 8085307 8093245 . + . ID=GSCOCP00034352001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q39214,SwissProt:Q8W474,SwissProt:Q9M667,TAIR:AT1G58390.1,TAIR:AT3G07040.1,TAIR:AT3G46530.1,TrEMBL:B9GTE7,TrEMBL:B9SHP9,TrEMBL:Q6PKX5;Derives_from=GSCOCT00034352001;Name=Cc10_g08710;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative Disease resistance protein RPM1,CC_functional_completeness:fragment,CC_gene:RPM1,CC_gene:RPP13,CC_gene:At1g58390;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034352001~ Putative Disease resistance protein RPM1~ RPM1~ fragment;original_location=complement(join(975196..975895%2C973570..973608%2C973141..973258%2C972197..972461%2C971947..972123%2C967957..968181));owner=coffea | |
| 42982 chr10 manual_curation exon 8093021 8093245 . + . Parent=GSCOCT00034352001 | |
| 42983 chr10 manual_curation exon 8089079 8089255 . + . Parent=GSCOCT00034352001 | |
| 42984 chr10 manual_curation exon 8088741 8089005 . + . Parent=GSCOCT00034352001 | |
| 42985 chr10 manual_curation exon 8087944 8088061 . + . Parent=GSCOCT00034352001 | |
| 42986 chr10 manual_curation exon 8087594 8087632 . + . Parent=GSCOCT00034352001 | |
| 42987 chr10 manual_curation exon 8085307 8086006 . + . Parent=GSCOCT00034352001 | |
| 42988 chr10 manual_curation CDS 8093021 8093245 . + 0 Parent=GSCOCT00034352001 | |
| 42989 chr10 manual_curation CDS 8089079 8089255 . + 0 Parent=GSCOCT00034352001 | |
| 42990 chr10 manual_curation CDS 8088741 8089005 . + 2 Parent=GSCOCT00034352001 | |
| 42991 chr10 manual_curation CDS 8087944 8088061 . + 1 Parent=GSCOCT00034352001 | |
| 42992 chr10 manual_curation CDS 8087594 8087632 . + 1 Parent=GSCOCT00034352001 | |
| 42993 chr10 manual_curation CDS 8085307 8086006 . + 0 Parent=GSCOCT00034352001 | |
| 42994 chr10 manual_curation gene 8093414 8109362 . - . ID=GSCOCG00034351001;Name=Cc10_g08720 | |
| 42995 chr10 manual_curation mRNA 8093414 8109362 . - . ID=GSCOCT00034351001;Parent=GSCOCG00034351001;Name=Cc10_g08720 | |
| 42996 chr10 manual_curation polypeptide 8094703 8109060 . - . ID=GSCOCP00034351001;Dbxref=InterPro:IPR004177,PFAM:PF02862,PROFILE:PS51043,SwissProt:O46606,SwissProt:Q6NZC7,SwissProt:Q8NEL9,TAIR:AT1G31480.1,TrEMBL:B9IQ95,TrEMBL:B9MWJ1,TrEMBL:B9SHQ6;Derives_from=GSCOCT00034351001;Name=Cc10_g08720;Ontology_term=CC_evidence_code:ISS,GO:0046872,CC_EC_number:missing_EC_number,PRODUCT:shoot gravitropism 2 (SGR2),CC_functional_completeness:complete,CC_gene:DDHD1,CC_gene:Sec23ip;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034351001~ shoot gravitropism 2 (SGR2)~ DDHD1~ complete;original_location=join(952142..952382%2C953566..953666%2C953952..954119%2C954264..954419%2C954843..954914%2C955003..955155%2C955347..955397%2C957366..957536%2C959618..959767%2C960817..960882%2C960971..961322%2C961411..961529%2C961610..961661%2C961746..961867%2C961948..961971%2C962843..962915%2C963798..963900%2C963986..964079%2C964158..964220%2C965231..965279%2C965396..965499%2C965732..965778%2C965928..966011%2C966071..966115%2C966271..966499);owner=coffea | |
| 42997 chr10 manual_curation exon 8108820 8109362 . - . Parent=GSCOCT00034351001 | |
| 42998 chr10 manual_curation exon 8107536 8107636 . - . Parent=GSCOCT00034351001 | |
| 42999 chr10 manual_curation exon 8107083 8107250 . - . Parent=GSCOCT00034351001 | |
| 43000 chr10 manual_curation exon 8106783 8106938 . - . Parent=GSCOCT00034351001 | |
| 43001 chr10 manual_curation exon 8106288 8106359 . - . Parent=GSCOCT00034351001 | |
| 43002 chr10 manual_curation exon 8106047 8106199 . - . Parent=GSCOCT00034351001 | |
| 43003 chr10 manual_curation exon 8105805 8105855 . - . Parent=GSCOCT00034351001 | |
| 43004 chr10 manual_curation exon 8103666 8103836 . - . Parent=GSCOCT00034351001 | |
| 43005 chr10 manual_curation exon 8101435 8101584 . - . Parent=GSCOCT00034351001 | |
| 43006 chr10 manual_curation exon 8100320 8100385 . - . Parent=GSCOCT00034351001 | |
| 43007 chr10 manual_curation exon 8099880 8100231 . - . Parent=GSCOCT00034351001 | |
| 43008 chr10 manual_curation exon 8099673 8099791 . - . Parent=GSCOCT00034351001 | |
| 43009 chr10 manual_curation exon 8099541 8099592 . - . Parent=GSCOCT00034351001 | |
| 43010 chr10 manual_curation exon 8099335 8099456 . - . Parent=GSCOCT00034351001 | |
| 43011 chr10 manual_curation exon 8099231 8099254 . - . Parent=GSCOCT00034351001 | |
| 43012 chr10 manual_curation exon 8098287 8098359 . - . Parent=GSCOCT00034351001 | |
| 43013 chr10 manual_curation exon 8097302 8097404 . - . Parent=GSCOCT00034351001 | |
| 43014 chr10 manual_curation exon 8097123 8097216 . - . Parent=GSCOCT00034351001 | |
| 43015 chr10 manual_curation exon 8096982 8097044 . - . Parent=GSCOCT00034351001 | |
| 43016 chr10 manual_curation exon 8095923 8095971 . - . Parent=GSCOCT00034351001 | |
| 43017 chr10 manual_curation exon 8095703 8095806 . - . Parent=GSCOCT00034351001 | |
| 43018 chr10 manual_curation exon 8095424 8095470 . - . Parent=GSCOCT00034351001 | |
| 43019 chr10 manual_curation exon 8095191 8095274 . - . Parent=GSCOCT00034351001 | |
| 43020 chr10 manual_curation exon 8095087 8095131 . - . Parent=GSCOCT00034351001 | |
| 43021 chr10 manual_curation exon 8093414 8094931 . - . Parent=GSCOCT00034351001 | |
| 43022 chr10 manual_curation CDS 8108820 8109060 . - 0 Parent=GSCOCT00034351001 | |
| 43023 chr10 manual_curation CDS 8107536 8107636 . - 1 Parent=GSCOCT00034351001 | |
| 43024 chr10 manual_curation CDS 8107083 8107250 . - 0 Parent=GSCOCT00034351001 | |
| 43025 chr10 manual_curation CDS 8106783 8106938 . - 0 Parent=GSCOCT00034351001 | |
| 43026 chr10 manual_curation CDS 8106288 8106359 . - 0 Parent=GSCOCT00034351001 | |
| 43027 chr10 manual_curation CDS 8106047 8106199 . - 0 Parent=GSCOCT00034351001 | |
| 43028 chr10 manual_curation CDS 8105805 8105855 . - 0 Parent=GSCOCT00034351001 | |
| 43029 chr10 manual_curation CDS 8103666 8103836 . - 0 Parent=GSCOCT00034351001 | |
| 43030 chr10 manual_curation CDS 8101435 8101584 . - 0 Parent=GSCOCT00034351001 | |
| 43031 chr10 manual_curation CDS 8100320 8100385 . - 0 Parent=GSCOCT00034351001 | |
| 43032 chr10 manual_curation CDS 8099880 8100231 . - 0 Parent=GSCOCT00034351001 | |
| 43033 chr10 manual_curation CDS 8099673 8099791 . - 1 Parent=GSCOCT00034351001 | |
| 43034 chr10 manual_curation CDS 8099541 8099592 . - 0 Parent=GSCOCT00034351001 | |
| 43035 chr10 manual_curation CDS 8099335 8099456 . - 1 Parent=GSCOCT00034351001 | |
| 43036 chr10 manual_curation CDS 8099231 8099254 . - 0 Parent=GSCOCT00034351001 | |
| 43037 chr10 manual_curation CDS 8098287 8098359 . - 0 Parent=GSCOCT00034351001 | |
| 43038 chr10 manual_curation CDS 8097302 8097404 . - 1 Parent=GSCOCT00034351001 | |
| 43039 chr10 manual_curation CDS 8097123 8097216 . - 2 Parent=GSCOCT00034351001 | |
| 43040 chr10 manual_curation CDS 8096982 8097044 . - 0 Parent=GSCOCT00034351001 | |
| 43041 chr10 manual_curation CDS 8095923 8095971 . - 0 Parent=GSCOCT00034351001 | |
| 43042 chr10 manual_curation CDS 8095703 8095806 . - 1 Parent=GSCOCT00034351001 | |
| 43043 chr10 manual_curation CDS 8095424 8095470 . - 0 Parent=GSCOCT00034351001 | |
| 43044 chr10 manual_curation CDS 8095191 8095274 . - 2 Parent=GSCOCT00034351001 | |
| 43045 chr10 manual_curation CDS 8095087 8095131 . - 2 Parent=GSCOCT00034351001 | |
| 43046 chr10 manual_curation CDS 8094703 8094931 . - 2 Parent=GSCOCT00034351001 | |
| 43047 chr10 manual_curation gene 8128485 8135323 . + . ID=GSCOCG00034348001;Name=Cc10_g08730 | |
| 43048 chr10 manual_curation mRNA 8128485 8135323 . + . ID=GSCOCT00034348001;Parent=GSCOCG00034348001;Name=Cc10_g08730 | |
| 43049 chr10 manual_curation polypeptide 8128636 8135030 . + . ID=GSCOCP00034348001;Dbxref=InterPro:IPR004087,InterPro:IPR004088,InterPro:IPR018111,PFAM:PF00013,PROFILE:PS50084,SMART:SM00322,SwissProt:Q91WJ8,SwissProt:Q96AE4,SwissProt:Q96I24,TAIR:AT1G33680.1,TAIR:AT2G25970.1,TAIR:AT4G10070.1,TrEMBL:B9SHQ3,TrEMBL:F6HN29,TrEMBL:G7K7W5;Derives_from=GSCOCT00034348001;Name=Cc10_g08730;Ontology_term=CC_evidence_code:ISS,GO:0003723,CC_EC_number:missing_EC_number,PRODUCT:Putative Far upstream element-binding protein 3,CC_functional_completeness:modules,CC_gene:FUBP3,CC_gene:FUBP1,CC_gene:Fubp1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034348001~ Putative Far upstream element-binding protein 3~ FUBP3~ modules;original_location=complement(join(932323..932566%2C931493..931830%2C930904..931089%2C930687..930785%2C930488..930559%2C930240..930356%2C927140..927406%2C926172..927032));owner=coffea | |
| 43050 chr10 manual_curation exon 8134170 8135323 . + . Parent=GSCOCT00034348001 | |
| 43051 chr10 manual_curation exon 8133796 8134062 . + . Parent=GSCOCT00034348001 | |
| 43052 chr10 manual_curation exon 8130846 8130962 . + . Parent=GSCOCT00034348001 | |
| 43053 chr10 manual_curation exon 8130643 8130714 . + . Parent=GSCOCT00034348001 | |
| 43054 chr10 manual_curation exon 8130417 8130515 . + . Parent=GSCOCT00034348001 | |
| 43055 chr10 manual_curation exon 8130113 8130298 . + . Parent=GSCOCT00034348001 | |
| 43056 chr10 manual_curation exon 8129372 8129709 . + . Parent=GSCOCT00034348001 | |
| 43057 chr10 manual_curation exon 8128485 8128879 . + . Parent=GSCOCT00034348001 | |
| 43058 chr10 manual_curation CDS 8134170 8135030 . + 0 Parent=GSCOCT00034348001 | |
| 43059 chr10 manual_curation CDS 8133796 8134062 . + 0 Parent=GSCOCT00034348001 | |
| 43060 chr10 manual_curation CDS 8130846 8130962 . + 0 Parent=GSCOCT00034348001 | |
| 43061 chr10 manual_curation CDS 8130643 8130714 . + 0 Parent=GSCOCT00034348001 | |
| 43062 chr10 manual_curation CDS 8130417 8130515 . + 0 Parent=GSCOCT00034348001 | |
| 43063 chr10 manual_curation CDS 8130113 8130298 . + 0 Parent=GSCOCT00034348001 | |
| 43064 chr10 manual_curation CDS 8129372 8129709 . + 1 Parent=GSCOCT00034348001 | |
| 43065 chr10 manual_curation CDS 8128636 8128879 . + 0 Parent=GSCOCT00034348001 | |
| 43066 chr10 manual_curation gene 8136103 8142908 . - . ID=GSCOCG00034347001;Name=Cc10_g08740 | |
| 43067 chr10 manual_curation mRNA 8136103 8142908 . - . ID=GSCOCT00034347001;Parent=GSCOCG00034347001;Name=Cc10_g08740 | |
| 43068 chr10 manual_curation polypeptide 8136437 8142798 . - . ID=GSCOCP00034347001;Dbxref=InterPro:IPR000938,PFAM:PF01302,PROFILE:PS50245,PROSITE:PS00845,SwissProt:Q5RBD9,SwissProt:Q5U378,SwissProt:Q5U508,TAIR:AT1G71440.1,TrEMBL:B9IQ98,TrEMBL:B9SHQ0,TrEMBL:D7TLE6;Derives_from=GSCOCT00034347001;Name=Cc10_g08740;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Tubulin-specific chaperone E,CC_functional_completeness:complete,CC_gene:tbce,CC_gene:TBCE;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034347001~ Putative Tubulin-specific chaperone E~ tbce~ complete;original_location=join(918404..918770%2C919270..919440%2C919716..919762%2C920274..920420%2C920524..920598%2C921059..921168%2C921258..921394%2C921502..921563%2C922047..922154%2C922237..922271%2C923294..923359%2C923731..923822%2C923904..923980%2C924065..924142%2C924667..924765);owner=coffea | |
| 43069 chr10 manual_curation exon 8142432 8142908 . - . Parent=GSCOCT00034347001 | |
| 43070 chr10 manual_curation exon 8141762 8141932 . - . Parent=GSCOCT00034347001 | |
| 43071 chr10 manual_curation exon 8141440 8141486 . - . Parent=GSCOCT00034347001 | |
| 43072 chr10 manual_curation exon 8140782 8140928 . - . Parent=GSCOCT00034347001 | |
| 43073 chr10 manual_curation exon 8140604 8140678 . - . Parent=GSCOCT00034347001 | |
| 43074 chr10 manual_curation exon 8140034 8140143 . - . Parent=GSCOCT00034347001 | |
| 43075 chr10 manual_curation exon 8139808 8139944 . - . Parent=GSCOCT00034347001 | |
| 43076 chr10 manual_curation exon 8139639 8139700 . - . Parent=GSCOCT00034347001 | |
| 43077 chr10 manual_curation exon 8139048 8139155 . - . Parent=GSCOCT00034347001 | |
| 43078 chr10 manual_curation exon 8138931 8138965 . - . Parent=GSCOCT00034347001 | |
| 43079 chr10 manual_curation exon 8137843 8137908 . - . Parent=GSCOCT00034347001 | |
| 43080 chr10 manual_curation exon 8137380 8137471 . - . Parent=GSCOCT00034347001 | |
| 43081 chr10 manual_curation exon 8137222 8137298 . - . Parent=GSCOCT00034347001 | |
| 43082 chr10 manual_curation exon 8137060 8137137 . - . Parent=GSCOCT00034347001 | |
| 43083 chr10 manual_curation exon 8136103 8136535 . - . Parent=GSCOCT00034347001 | |
| 43084 chr10 manual_curation CDS 8142432 8142798 . - 0 Parent=GSCOCT00034347001 | |
| 43085 chr10 manual_curation CDS 8141762 8141932 . - 1 Parent=GSCOCT00034347001 | |
| 43086 chr10 manual_curation CDS 8141440 8141486 . - 1 Parent=GSCOCT00034347001 | |
| 43087 chr10 manual_curation CDS 8140782 8140928 . - 0 Parent=GSCOCT00034347001 | |
| 43088 chr10 manual_curation CDS 8140604 8140678 . - 0 Parent=GSCOCT00034347001 | |
| 43089 chr10 manual_curation CDS 8140034 8140143 . - 0 Parent=GSCOCT00034347001 | |
| 43090 chr10 manual_curation CDS 8139808 8139944 . - 2 Parent=GSCOCT00034347001 | |
| 43091 chr10 manual_curation CDS 8139639 8139700 . - 1 Parent=GSCOCT00034347001 | |
| 43092 chr10 manual_curation CDS 8139048 8139155 . - 0 Parent=GSCOCT00034347001 | |
| 43093 chr10 manual_curation CDS 8138931 8138965 . - 0 Parent=GSCOCT00034347001 | |
| 43094 chr10 manual_curation CDS 8137843 8137908 . - 2 Parent=GSCOCT00034347001 | |
| 43095 chr10 manual_curation CDS 8137380 8137471 . - 2 Parent=GSCOCT00034347001 | |
| 43096 chr10 manual_curation CDS 8137222 8137298 . - 1 Parent=GSCOCT00034347001 | |
| 43097 chr10 manual_curation CDS 8137060 8137137 . - 0 Parent=GSCOCT00034347001 | |
| 43098 chr10 manual_curation CDS 8136437 8136535 . - 0 Parent=GSCOCT00034347001 | |
| 43099 chr10 manual_curation gene 8146725 8150798 . + . ID=GSCOCG00034345001;Name=Cc10_g08750 | |
| 43100 chr10 manual_curation mRNA 8146725 8150798 . + . ID=GSCOCT00034345001;Parent=GSCOCG00034345001;Name=Cc10_g08750 | |
| 43101 chr10 manual_curation polypeptide 8148036 8150611 . + . ID=GSCOCP00034345001;Dbxref=InterPro:IPR004226,PANTHER:PTHR21500,PFAM:PF02970,PRODOM:PD010430,SUPERFAMILY:SSF46988,SwissProt:O04350,SwissProt:O75347,SwissProt:Q6PEC1,TAIR:AT2G30410.1,TrEMBL:B9SDB0,TrEMBL:C6T107,TrEMBL:Q547H3;Derives_from=GSCOCT00034345001;Name=Cc10_g08750;Ontology_term=CC_evidence_code:ISS,GO:0005874,GO:0007021,GO:0051082,CC_EC_number:missing_EC_number,PRODUCT:Tubulin-specific chaperone A,CC_functional_completeness:complete,CC_gene:At2g30410,CC_gene:TBCA,CC_gene:Tbca;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034345001~ Tubulin-specific chaperone A~ At2g30410~ complete;original_location=complement(join(913011..913166%2C911461..911547%2C910591..910689));owner=coffea | |
| 43102 chr10 manual_curation exon 8146725 8147012 . + . Parent=GSCOCT00034345001 | |
| 43103 chr10 manual_curation exon 8150513 8150798 . + . Parent=GSCOCT00034345001 | |
| 43104 chr10 manual_curation exon 8149655 8149741 . + . Parent=GSCOCT00034345001 | |
| 43105 chr10 manual_curation exon 8148035 8148191 . + . Parent=GSCOCT00034345001 | |
| 43106 chr10 manual_curation CDS 8150513 8150611 . + 0 Parent=GSCOCT00034345001 | |
| 43107 chr10 manual_curation CDS 8149655 8149741 . + 0 Parent=GSCOCT00034345001 | |
| 43108 chr10 manual_curation CDS 8148036 8148191 . + 0 Parent=GSCOCT00034345001 | |
| 43109 chr10 manual_curation gene 8166782 8168623 . + . ID=GSCOCG00034343001;Name=Cc10_g08760 | |
| 43110 chr10 manual_curation mRNA 8166782 8168623 . + . ID=GSCOCT00034343001;Parent=GSCOCG00034343001;Name=Cc10_g08760 | |
| 43111 chr10 manual_curation polypeptide 8166782 8168623 . + . ID=GSCOCP00034343001;Dbxref=GENE3D:G3DSA:4.10.280.10,InterPro:IPR001092,InterPro:IPR011598,PFAM:PF00010,PROFILE:PS50888,SMART:SM00353,SUPERFAMILY:SSF47459,SwissProt:Q1PF16,SwissProt:Q1PF17,SwissProt:Q9T072,TAIR:AT2G22750.2,TAIR:AT2G22760.1,TAIR:AT4G37850.1,TrEMBL:A5BUH3,TrEMBL:B9RX26,TrEMBL:D7T3I8;Derives_from=GSCOCT00034343001;Name=Cc10_g08760;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0030528,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative Transcription factor bHLH25,CC_functional_completeness:fragment,CC_gene:BHLH25,CC_gene:BHLH19,CC_gene:BHLH18;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034343001~ Putative Transcription factor bHLH25~ BHLH25~ fragment;original_location=complement(join(894235..894420%2C893211..893576%2C892579..892656));owner=coffea | |
| 43112 chr10 manual_curation exon 8168546 8168623 . + . Parent=GSCOCT00034343001 | |
| 43113 chr10 manual_curation exon 8167626 8167991 . + . Parent=GSCOCT00034343001 | |
| 43114 chr10 manual_curation exon 8166782 8166967 . + . Parent=GSCOCT00034343001 | |
| 43115 chr10 manual_curation CDS 8168546 8168623 . + 0 Parent=GSCOCT00034343001 | |
| 43116 chr10 manual_curation CDS 8167626 8167991 . + 0 Parent=GSCOCT00034343001 | |
| 43117 chr10 manual_curation CDS 8166782 8166967 . + 0 Parent=GSCOCT00034343001 | |
| 43118 chr10 manual_curation gene 8177009 8180401 . + . ID=GSCOCG00034342001;Name=Cc10_g08770 | |
| 43119 chr10 manual_curation mRNA 8177009 8180401 . + . ID=GSCOCT00034342001;Parent=GSCOCG00034342001;Name=Cc10_g08770 | |
| 43120 chr10 manual_curation polypeptide 8177009 8180401 . + . ID=GSCOCP00034342001;Dbxref=GENE3D:G3DSA:4.10.280.10,InterPro:IPR001092,InterPro:IPR011598,PFAM:PF00010,PROFILE:PS50888,SMART:SM00353,SUPERFAMILY:SSF47459,SwissProt:Q1PF16,SwissProt:Q1PF17,SwissProt:Q9T072,TAIR:AT2G22750.2,TAIR:AT2G22760.1,TAIR:AT4G37850.1,TrEMBL:A5BUH3,TrEMBL:B9SSE2,TrEMBL:D7T3I8;Derives_from=GSCOCT00034342001;Name=Cc10_g08770;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0030528,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:BHLH25,CC_gene:BHLH19,CC_gene:BHLH18;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034342001~ Hypothetical protein~ BHLH25~ missing_functional_completeness;original_location=complement(join(883881..884193%2C883634..883779%2C881473..881838%2C880801..880878));owner=coffea | |
| 43121 chr10 manual_curation exon 8180324 8180401 . + . Parent=GSCOCT00034342001 | |
| 43122 chr10 manual_curation exon 8179364 8179729 . + . Parent=GSCOCT00034342001 | |
| 43123 chr10 manual_curation exon 8177423 8177568 . + . Parent=GSCOCT00034342001 | |
| 43124 chr10 manual_curation exon 8177009 8177321 . + . Parent=GSCOCT00034342001 | |
| 43125 chr10 manual_curation CDS 8180324 8180401 . + 0 Parent=GSCOCT00034342001 | |
| 43126 chr10 manual_curation CDS 8179364 8179729 . + 0 Parent=GSCOCT00034342001 | |
| 43127 chr10 manual_curation CDS 8177423 8177568 . + 1 Parent=GSCOCT00034342001 | |
| 43128 chr10 manual_curation CDS 8177009 8177321 . + 0 Parent=GSCOCT00034342001 | |
| 43129 chr10 manual_curation gene 8182266 8192804 . + . ID=GSCOCG00034341001;Name=Cc10_g08780 | |
| 43130 chr10 manual_curation mRNA 8182266 8192804 . + . ID=GSCOCT00034341001;Parent=GSCOCG00034341001;Name=Cc10_g08780 | |
| 43131 chr10 manual_curation polypeptide 8182301 8192533 . + . ID=GSCOCP00034341001;Dbxref=InterPro:IPR000073,InterPro:IPR000639,InterPro:IPR016812,PFAM:PF00561,PIR:PIRSF022950,PRINTS:PR00111,PRINTS:PR00412,SwissProt:Q4FZT2,SwissProt:Q58DN4,SwissProt:Q8BVQ5,TAIR:AT4G10050.1,TrEMBL:B9IQA0,TrEMBL:D7TLE9,TrEMBL:I1LG43;Derives_from=GSCOCT00034341001;Name=Cc10_g08780;Ontology_term=CC_evidence_code:ISS,GO:0003824,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein phosphatase methylesterase 1,CC_functional_completeness:complete,CC_gene:Ppme1,CC_gene:PPME1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034341001~ Putative Protein phosphatase methylesterase 1~ Ppme1~ complete;original_location=complement(join(878741..878901%2C877069..877153%2C876910..876980%2C874941..875055%2C874710..874789%2C873085..873169%2C872922..873002%2C871444..871538%2C871223..871273%2C870195..870275%2C869270..869342%2C869106..869183%2C868669..868698));owner=coffea | |
| 43132 chr10 manual_curation exon 8192504 8192804 . + . Parent=GSCOCT00034341001 | |
| 43133 chr10 manual_curation exon 8192019 8192096 . + . Parent=GSCOCT00034341001 | |
| 43134 chr10 manual_curation exon 8191860 8191932 . + . Parent=GSCOCT00034341001 | |
| 43135 chr10 manual_curation exon 8190927 8191007 . + . Parent=GSCOCT00034341001 | |
| 43136 chr10 manual_curation exon 8189929 8189979 . + . Parent=GSCOCT00034341001 | |
| 43137 chr10 manual_curation exon 8189664 8189758 . + . Parent=GSCOCT00034341001 | |
| 43138 chr10 manual_curation exon 8188200 8188280 . + . Parent=GSCOCT00034341001 | |
| 43139 chr10 manual_curation exon 8188033 8188117 . + . Parent=GSCOCT00034341001 | |
| 43140 chr10 manual_curation exon 8186413 8186492 . + . Parent=GSCOCT00034341001 | |
| 43141 chr10 manual_curation exon 8186147 8186261 . + . Parent=GSCOCT00034341001 | |
| 43142 chr10 manual_curation exon 8184222 8184292 . + . Parent=GSCOCT00034341001 | |
| 43143 chr10 manual_curation exon 8184049 8184133 . + . Parent=GSCOCT00034341001 | |
| 43144 chr10 manual_curation exon 8182266 8182461 . + . Parent=GSCOCT00034341001 | |
| 43145 chr10 manual_curation CDS 8192504 8192533 . + 0 Parent=GSCOCT00034341001 | |
| 43146 chr10 manual_curation CDS 8192019 8192096 . + 0 Parent=GSCOCT00034341001 | |
| 43147 chr10 manual_curation CDS 8191860 8191932 . + 2 Parent=GSCOCT00034341001 | |
| 43148 chr10 manual_curation CDS 8190927 8191007 . + 2 Parent=GSCOCT00034341001 | |
| 43149 chr10 manual_curation CDS 8189929 8189979 . + 2 Parent=GSCOCT00034341001 | |
| 43150 chr10 manual_curation CDS 8189664 8189758 . + 0 Parent=GSCOCT00034341001 | |
| 43151 chr10 manual_curation CDS 8188200 8188280 . + 0 Parent=GSCOCT00034341001 | |
| 43152 chr10 manual_curation CDS 8188033 8188117 . + 2 Parent=GSCOCT00034341001 | |
| 43153 chr10 manual_curation CDS 8186413 8186492 . + 0 Parent=GSCOCT00034341001 | |
| 43154 chr10 manual_curation CDS 8186147 8186261 . + 2 Parent=GSCOCT00034341001 | |
| 43155 chr10 manual_curation CDS 8184222 8184292 . + 0 Parent=GSCOCT00034341001 | |
| 43156 chr10 manual_curation CDS 8184049 8184133 . + 2 Parent=GSCOCT00034341001 | |
| 43157 chr10 manual_curation CDS 8182301 8182461 . + 0 Parent=GSCOCT00034341001 | |
| 43158 chr10 manual_curation gene 8211564 8213995 . - . ID=GSCOCG00034340001;Name=Cc10_g08790 | |
| 43159 chr10 manual_curation mRNA 8211564 8213995 . - . ID=GSCOCT00034340001;Parent=GSCOCG00034340001;Name=Cc10_g08790 | |
| 43160 chr10 manual_curation polypeptide 8211851 8213596 . - . ID=GSCOCP00034340001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q9LTV8,SwissProt:Q9SN39,SwissProt:Q9SVP7,TAIR:AT3G12770.1,TAIR:AT4G13650.1,TAIR:AT4G18750.1,TIGRFAMs:TIGR00756,TrEMBL:A5AJ01,TrEMBL:B9GYU2,TrEMBL:F6HMB0;Derives_from=GSCOCT00034340001;Name=Cc10_g08790;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Pentatricopeptide repeat-containing protein At4g13650,CC_functional_completeness:complete,CC_gene:PCMP-H42,CC_gene:PCMP-H45,CC_gene:PCMP-H43;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034340001~ Putative Pentatricopeptide repeat-containing protein At4g13650~ PCMP-H42~ complete;original_location=847606..849351;owner=coffea | |
| 43161 chr10 manual_curation exon 8211564 8213995 . - . Parent=GSCOCT00034340001 | |
| 43162 chr10 manual_curation CDS 8211851 8213596 . - 0 Parent=GSCOCT00034340001 | |
| 43163 chr10 manual_curation gene 8297082 8297621 . - . ID=GSCOCG00034338001;Name=Cc10_g08800 | |
| 43164 chr10 manual_curation mRNA 8297082 8297621 . - . ID=GSCOCT00034338001;Parent=GSCOCG00034338001;Name=Cc10_g08800 | |
| 43165 chr10 manual_curation polypeptide 8297082 8297450 . - . ID=GSCOCP00034338001;Derives_from=GSCOCT00034338001;Name=Cc10_g08800;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034338001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=763752..764120;owner=coffea | |
| 43166 chr10 manual_curation exon 8297082 8297621 . - . Parent=GSCOCT00034338001 | |
| 43167 chr10 manual_curation CDS 8297082 8297450 . - 0 Parent=GSCOCT00034338001 | |
| 43168 chr10 manual_curation gene 8318087 8320306 . + . ID=GSCOCG00034335001;Name=Cc10_g08810 | |
| 43169 chr10 manual_curation mRNA 8318087 8320306 . + . ID=GSCOCT00034335001;Parent=GSCOCG00034335001;Name=Cc10_g08810 | |
| 43170 chr10 manual_curation polypeptide 8318201 8320032 . + . ID=GSCOCP00034335001;Dbxref=GENE3D:G3DSA:1.10.455.10,InterPro:IPR000235,InterPro:IPR005716,InterPro:IPR020606,PANTHER:PTHR11205,PANTHER:PTHR11205:SF1,PFAM:PF00177,PROSITE:PS00052,SUPERFAMILY:SSF47973,SwissProt:O65731,SwissProt:P51427,SwissProt:Q9ZUT9,TAIR:AT2G37270.1,TAIR:AT3G11940.1,TIGRFAMs:TIGR01028,TrEMBL:B3TLN7,TrEMBL:D7TDS1;Derives_from=GSCOCT00034335001;Name=Cc10_g08810;Ontology_term=CC_evidence_code:ISS,GO:0003723,GO:0003735,GO:0005622,GO:0005840,GO:0006412,GO:0015935,CC_EC_number:missing_EC_number,PRODUCT:40S ribosomal protein S5 (Fragment),CC_functional_completeness:complete,CC_gene:RPS5,CC_gene:RPS5B,CC_gene:RPS5A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034335001~ 40S ribosomal protein S5 (Fragment)~ RPS5~ complete;original_location=complement(join(742921..743001%2C741878..742149%2C741430..741633%2C741170..741224));owner=coffea | |
| 43171 chr10 manual_curation exon 8319978 8320306 . + . Parent=GSCOCT00034335001 | |
| 43172 chr10 manual_curation exon 8319569 8319772 . + . Parent=GSCOCT00034335001 | |
| 43173 chr10 manual_curation exon 8319053 8319324 . + . Parent=GSCOCT00034335001 | |
| 43174 chr10 manual_curation exon 8318087 8318281 . + . Parent=GSCOCT00034335001 | |
| 43175 chr10 manual_curation CDS 8319978 8320032 . + 2 Parent=GSCOCT00034335001 | |
| 43176 chr10 manual_curation CDS 8319569 8319772 . + 2 Parent=GSCOCT00034335001 | |
| 43177 chr10 manual_curation CDS 8319053 8319324 . + 0 Parent=GSCOCT00034335001 | |
| 43178 chr10 manual_curation CDS 8318201 8318281 . + 0 Parent=GSCOCT00034335001 | |
| 43179 chr10 manual_curation gene 8321509 8326471 . + . ID=GSCOCG00034334001;Name=Cc10_g08820 | |
| 43180 chr10 manual_curation mRNA 8321509 8326471 . + . ID=GSCOCT00034334001;Parent=GSCOCG00034334001;Name=Cc10_g08820 | |
| 43181 chr10 manual_curation polypeptide 8321687 8326088 . + . ID=GSCOCP00034334001;Dbxref=InterPro:IPR002075,PFAM:PF02136,TAIR:AT1G71480.1,TAIR:AT5G41470.1,TrEMBL:B9IQB1,TrEMBL:B9SPW4,TrEMBL:F6HN34;Derives_from=GSCOCT00034334001;Name=Cc10_g08820;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0006810,CC_EC_number:missing_EC_number,PRODUCT:Predicted protein (Fragment),CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034334001~ Predicted protein (Fragment)~ unknown_gene~ modules;original_location=complement(join(739156..739515%2C737990..738104%2C737823..737904%2C736669..736720%2C735114..735176));owner=coffea | |
| 43182 chr10 manual_curation exon 8326026 8326471 . + . Parent=GSCOCT00034334001 | |
| 43183 chr10 manual_curation exon 8324482 8324533 . + . Parent=GSCOCT00034334001 | |
| 43184 chr10 manual_curation exon 8323298 8323379 . + . Parent=GSCOCT00034334001 | |
| 43185 chr10 manual_curation exon 8323098 8323212 . + . Parent=GSCOCT00034334001 | |
| 43186 chr10 manual_curation exon 8321509 8322046 . + . Parent=GSCOCT00034334001 | |
| 43187 chr10 manual_curation CDS 8326026 8326088 . + 0 Parent=GSCOCT00034334001 | |
| 43188 chr10 manual_curation CDS 8324482 8324533 . + 2 Parent=GSCOCT00034334001 | |
| 43189 chr10 manual_curation CDS 8323298 8323379 . + 1 Parent=GSCOCT00034334001 | |
| 43190 chr10 manual_curation CDS 8323098 8323212 . + 0 Parent=GSCOCT00034334001 | |
| 43191 chr10 manual_curation CDS 8321687 8322046 . + 0 Parent=GSCOCT00034334001 | |
| 43192 chr10 manual_curation gene 8327715 8331195 . + . ID=GSCOCG00034333001;Name=Cc10_g08830 | |
| 43193 chr10 manual_curation mRNA 8327715 8331195 . + . ID=GSCOCT00034333001;Parent=GSCOCG00034333001;Name=Cc10_g08830 | |
| 43194 chr10 manual_curation polypeptide 8328756 8331096 . + . ID=GSCOCP00034333001;Dbxref=GENE3D:G3DSA:2.70.210.12,InterPro:IPR002917,InterPro:IPR006073,InterPro:IPR006169,InterPro:IPR014100,PANTHER:PTHR11702:SF3,PFAM:PF01018,PFAM:PF01926,PIR:PIRSF002401,PRINTS:PR00326,SUPERFAMILY:SSF82051,SwissProt:A8MHK8,SwissProt:B2UQ30,SwissProt:B8CXZ0,TAIR:AT1G07615.1,TAIR:AT5G18570.1,TrEMBL:E5GCK2,TrEMBL:F6GV14,TrEMBL:G7I2N7;Derives_from=GSCOCT00034333001;Name=Cc10_g08830;Ontology_term=CC_evidence_code:ISS,GO:0000287,GO:0003924,GO:0005525,GO:0005622,CC_EC_number:missing_EC_number,PRODUCT:GTP-binding protein Obg/CgtA,CC_functional_completeness:complete,CC_gene:obg;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034333001~ GTP-binding protein Obg/CgtA~ obg~ complete;original_location=complement(join(732315..732446%2C731945..732053%2C731558..731640%2C731359..731421%2C730106..731251));owner=coffea | |
| 43195 chr10 manual_curation exon 8329951 8331195 . + . Parent=GSCOCT00034333001 | |
| 43196 chr10 manual_curation exon 8329781 8329843 . + . Parent=GSCOCT00034333001 | |
| 43197 chr10 manual_curation exon 8329562 8329644 . + . Parent=GSCOCT00034333001 | |
| 43198 chr10 manual_curation exon 8329149 8329257 . + . Parent=GSCOCT00034333001 | |
| 43199 chr10 manual_curation exon 8327715 8328887 . + . Parent=GSCOCT00034333001 | |
| 43200 chr10 manual_curation CDS 8329951 8331096 . + 0 Parent=GSCOCT00034333001 | |
| 43201 chr10 manual_curation CDS 8329781 8329843 . + 0 Parent=GSCOCT00034333001 | |
| 43202 chr10 manual_curation CDS 8329562 8329644 . + 1 Parent=GSCOCT00034333001 | |
| 43203 chr10 manual_curation CDS 8329149 8329257 . + 0 Parent=GSCOCT00034333001 | |
| 43204 chr10 manual_curation CDS 8328756 8328887 . + 0 Parent=GSCOCT00034333001 | |
| 43205 chr10 manual_curation gene 8334962 8336076 . + . ID=GSCOCG00034332001;Name=Cc10_g08840 | |
| 43206 chr10 manual_curation mRNA 8334962 8336076 . + . ID=GSCOCT00034332001;Parent=GSCOCG00034332001;Name=Cc10_g08840 | |
| 43207 chr10 manual_curation polypeptide 8335032 8335736 . + . ID=GSCOCP00034332001;Dbxref=InterPro:IPR000347,PFAM:PF01439,SwissProt:P20238,SwissProt:Q0IMG5,TrEMBL:G9J2D8,TrEMBL:I1R7D0,TrEMBL:Q2QKE5;Derives_from=GSCOCT00034332001;Name=Cc10_g08840;Ontology_term=CC_evidence_code:ISS,GO:0046872,CC_EC_number:missing_EC_number,PRODUCT:Metallothionein-like protein 4A,CC_functional_completeness:complete,CC_gene:MT4A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034332001~ Metallothionein-like protein 4A~ MT4A~ complete;original_location=complement(join(726112..726170%2C725672..725740%2C725466..725562));owner=coffea | |
| 43208 chr10 manual_curation exon 8335640 8336076 . + . Parent=GSCOCT00034332001 | |
| 43209 chr10 manual_curation exon 8335462 8335530 . + . Parent=GSCOCT00034332001 | |
| 43210 chr10 manual_curation exon 8334962 8335090 . + . Parent=GSCOCT00034332001 | |
| 43211 chr10 manual_curation CDS 8335640 8335736 . + 2 Parent=GSCOCT00034332001 | |
| 43212 chr10 manual_curation CDS 8335462 8335530 . + 2 Parent=GSCOCT00034332001 | |
| 43213 chr10 manual_curation CDS 8335032 8335090 . + 0 Parent=GSCOCT00034332001 | |
| 43214 chr10 manual_curation gene 8341102 8342223 . + . ID=GSCOCG00034331001;Name=Cc10_g08850 | |
| 43215 chr10 manual_curation mRNA 8341102 8342223 . + . ID=GSCOCT00034331001;Parent=GSCOCG00034331001;Name=Cc10_g08850 | |
| 43216 chr10 manual_curation polypeptide 8341280 8341918 . + . ID=GSCOCP00034331001;Dbxref=InterPro:IPR000347,PFAM:PF01439,SwissProt:P20238,SwissProt:Q40410,SwissProt:Q43515,TrEMBL:G9J2D8,TrEMBL:O82581,TrEMBL:Q5GMM9;Derives_from=GSCOCT00034331001;Name=Cc10_g08850;Ontology_term=CC_evidence_code:ISS,GO:0046872,CC_EC_number:missing_EC_number,PRODUCT:Metallothionein-like protein 1,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034331001~ Metallothionein-like protein 1~ unknown_gene~ fragment;original_location=complement(join(719897..719922%2C719492..719560%2C719284..719380));owner=coffea | |
| 43217 chr10 manual_curation exon 8341822 8342223 . + . Parent=GSCOCT00034331001 | |
| 43218 chr10 manual_curation exon 8341642 8341710 . + . Parent=GSCOCT00034331001 | |
| 43219 chr10 manual_curation exon 8341102 8341305 . + . Parent=GSCOCT00034331001 | |
| 43220 chr10 manual_curation CDS 8341822 8341918 . + 2 Parent=GSCOCT00034331001 | |
| 43221 chr10 manual_curation CDS 8341642 8341710 . + 2 Parent=GSCOCT00034331001 | |
| 43222 chr10 manual_curation CDS 8341280 8341305 . + 0 Parent=GSCOCT00034331001 | |
| 43223 chr10 manual_curation gene 8343079 8348430 . - . ID=GSCOCG00034330001;Name=Cc10_g08860 | |
| 43224 chr10 manual_curation mRNA 8343079 8348430 . - . ID=GSCOCT00034330001;Parent=GSCOCG00034330001;Name=Cc10_g08860 | |
| 43225 chr10 manual_curation polypeptide 8343381 8348287 . - . ID=GSCOCP00034330001;Dbxref=GENE3D:G3DSA:1.25.40.20,GENE3D:G3DSA:3.30.710.10,InterPro:IPR000210,InterPro:IPR002110,InterPro:IPR011333,InterPro:IPR013069,InterPro:IPR013089,InterPro:IPR020683,PANTHER:PTHR23230,PFAM:PF00651,PROFILE:PS50088,PROFILE:PS50097,PROFILE:PS50297,SMART:SM00225,SUPERFAMILY:SSF48403,SUPERFAMILY:SSF54695,SwissProt:Q5XIU1,SwissProt:Q99LJ2,SwissProt:Q9SJ85,TAIR:AT2G04740.1,TrEMBL:B9IAP7,TrEMBL:B9T217,TrEMBL:F6HIB1;Derives_from=GSCOCT00034330001;Name=Cc10_g08860;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:BTB/POZ domain-containing protein At2g04740,CC_functional_completeness:complete,CC_gene:At2g04740,CC_gene:Abtb1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034330001~ BTB/POZ domain-containing protein At2g04740~ At2g04740~ complete;original_location=join(712915..713362%2C714616..715375%2C716228..716264%2C716385..716518%2C717452..717821);owner=coffea | |
| 43226 chr10 manual_curation exon 8347840 8348430 . - . Parent=GSCOCT00034330001 | |
| 43227 chr10 manual_curation exon 8345827 8346586 . - . Parent=GSCOCT00034330001 | |
| 43228 chr10 manual_curation exon 8344938 8344974 . - . Parent=GSCOCT00034330001 | |
| 43229 chr10 manual_curation exon 8344684 8344817 . - . Parent=GSCOCT00034330001 | |
| 43230 chr10 manual_curation exon 8343079 8343750 . - . Parent=GSCOCT00034330001 | |
| 43231 chr10 manual_curation CDS 8347840 8348287 . - 0 Parent=GSCOCT00034330001 | |
| 43232 chr10 manual_curation CDS 8345827 8346586 . - 1 Parent=GSCOCT00034330001 | |
| 43233 chr10 manual_curation CDS 8344938 8344974 . - 2 Parent=GSCOCT00034330001 | |
| 43234 chr10 manual_curation CDS 8344684 8344817 . - 0 Parent=GSCOCT00034330001 | |
| 43235 chr10 manual_curation CDS 8343381 8343750 . - 2 Parent=GSCOCT00034330001 | |
| 43236 chr10 manual_curation gene 8349865 8351496 . - . ID=GSCOCG00034329001;Name=Cc10_g08870 | |
| 43237 chr10 manual_curation mRNA 8349865 8351496 . - . ID=GSCOCT00034329001;Parent=GSCOCG00034329001;Name=Cc10_g08870 | |
| 43238 chr10 manual_curation polypeptide 8350258 8351370 . - . ID=GSCOCP00034329001;Dbxref=GENE3D:G3DSA:3.40.30.10,InterPro:IPR004123,InterPro:IPR012335,InterPro:IPR012336,PANTHER:PTHR12052,PFAM:PF02966,SUPERFAMILY:SSF52833;Derives_from=GSCOCT00034329001;Name=Cc10_g08870;Ontology_term=CC_evidence_code:ISS,GO:0005681,GO:0007067,CC_EC_number:missing_EC_number,PRODUCT:Putative mRNA splicing factor%2C thioredoxin-like U5 snRNP,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034329001~ Putative mRNA splicing factor%2C thioredoxin-like U5 snRNP~ unknown_gene~ complete;original_location=join(709832..709948%2C710693..710944);owner=coffea | |
| 43239 chr10 manual_curation exon 8351254 8351496 . - . Parent=GSCOCT00034329001 | |
| 43240 chr10 manual_curation exon 8349865 8350509 . - . Parent=GSCOCT00034329001 | |
| 43241 chr10 manual_curation CDS 8351254 8351370 . - 0 Parent=GSCOCT00034329001 | |
| 43242 chr10 manual_curation CDS 8350258 8350509 . - 0 Parent=GSCOCT00034329001 | |
| 43243 chr10 manual_curation gene 8353451 8354232 . - . ID=GSCOCG00034328001;Name=Cc10_g08880 | |
| 43244 chr10 manual_curation mRNA 8353451 8354232 . - . ID=GSCOCT00034328001;Parent=GSCOCG00034328001;Name=Cc10_g08880 | |
| 43245 chr10 manual_curation polypeptide 8353451 8354232 . - . ID=GSCOCP00034328001;Dbxref=TrEMBL:B9HI51;Derives_from=GSCOCT00034328001;Name=Cc10_g08880;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034328001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(706970..707310%2C707568..707751);owner=coffea | |
| 43246 chr10 manual_curation exon 8353892 8354232 . - . Parent=GSCOCT00034328001 | |
| 43247 chr10 manual_curation exon 8353451 8353634 . - . Parent=GSCOCT00034328001 | |
| 43248 chr10 manual_curation CDS 8353892 8354232 . - 0 Parent=GSCOCT00034328001 | |
| 43249 chr10 manual_curation CDS 8353451 8353634 . - 2 Parent=GSCOCT00034328001 | |
| 43250 chr10 manual_curation gene 8355462 8357324 . - . ID=GSCOCG00034326001;Name=Cc10_g08890 | |
| 43251 chr10 manual_curation mRNA 8355462 8357324 . - . ID=GSCOCT00034326001;Parent=GSCOCG00034326001;Name=Cc10_g08890 | |
| 43252 chr10 manual_curation polypeptide 8355462 8357324 . - . ID=GSCOCP00034326001;Dbxref=InterPro:IPR020683,SUPERFAMILY:SSF48403,TAIR:AT3G18670.1,TAIR:AT5G04700.1,TAIR:AT5G04730.1,TrEMBL:A5C2E8,TrEMBL:F6HLW7,TrEMBL:I1N0F2;Derives_from=GSCOCT00034326001;Name=Cc10_g08890;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Ankyrin repeat family protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034326001~ Putative Ankyrin repeat family protein~ unknown_gene~ fragment;original_location=join(703878..704363%2C705120..705740);owner=coffea | |
| 43253 chr10 manual_curation exon 8356839 8357324 . - . Parent=GSCOCT00034326001 | |
| 43254 chr10 manual_curation exon 8355462 8356082 . - . Parent=GSCOCT00034326001 | |
| 43255 chr10 manual_curation CDS 8356839 8357324 . - 0 Parent=GSCOCT00034326001 | |
| 43256 chr10 manual_curation CDS 8355462 8356082 . - 0 Parent=GSCOCT00034326001 | |
| 43257 chr10 manual_curation gene 8367846 8372727 . - . ID=GSCOCG00034325001;Name=Cc10_g08900 | |
| 43258 chr10 manual_curation mRNA 8367846 8372727 . - . ID=GSCOCT00034325001;Parent=GSCOCG00034325001;Name=Cc10_g08900 | |
| 43259 chr10 manual_curation polypeptide 8367966 8372727 . - . ID=GSCOCP00034325001;Dbxref=GENE3D:G3DSA:1.25.40.20,InterPro:IPR002110,InterPro:IPR020683,PROFILE:PS50088,PROFILE:PS50297,SMART:SM00248,SUPERFAMILY:SSF48403,TAIR:AT3G18670.1,TAIR:AT5G04700.1,TAIR:AT5G04730.1,TrEMBL:A5C2E8,TrEMBL:G7KD39,TrEMBL:I1N0F2;Derives_from=GSCOCT00034325001;Name=Cc10_g08900;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Ankyrin repeat family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034325001~ Putative Ankyrin repeat family protein~ unknown_gene~ complete;original_location=join(688475..688721%2C689607..690161%2C690569..690718%2C691308..691418%2C691700..692148%2C692577..693236);owner=coffea | |
| 43260 chr10 manual_curation exon 8372481 8372727 . - . Parent=GSCOCT00034325001 | |
| 43261 chr10 manual_curation exon 8371041 8371595 . - . Parent=GSCOCT00034325001 | |
| 43262 chr10 manual_curation exon 8370484 8370633 . - . Parent=GSCOCT00034325001 | |
| 43263 chr10 manual_curation exon 8369784 8369894 . - . Parent=GSCOCT00034325001 | |
| 43264 chr10 manual_curation exon 8369054 8369502 . - . Parent=GSCOCT00034325001 | |
| 43265 chr10 manual_curation exon 8367846 8368625 . - . Parent=GSCOCT00034325001 | |
| 43266 chr10 manual_curation CDS 8372481 8372727 . - 0 Parent=GSCOCT00034325001 | |
| 43267 chr10 manual_curation CDS 8371041 8371595 . - 1 Parent=GSCOCT00034325001 | |
| 43268 chr10 manual_curation CDS 8370484 8370633 . - 1 Parent=GSCOCT00034325001 | |
| 43269 chr10 manual_curation CDS 8369784 8369894 . - 1 Parent=GSCOCT00034325001 | |
| 43270 chr10 manual_curation CDS 8369054 8369502 . - 1 Parent=GSCOCT00034325001 | |
| 43271 chr10 manual_curation CDS 8367966 8368625 . - 0 Parent=GSCOCT00034325001 | |
| 43272 chr10 manual_curation gene 8385221 8387352 . + . ID=GSCOCG00034323001;Name=Cc10_g08910 | |
| 43273 chr10 manual_curation mRNA 8385221 8387352 . + . ID=GSCOCT00034323001;Parent=GSCOCG00034323001;Name=Cc10_g08910 | |
| 43274 chr10 manual_curation polypeptide 8385221 8387352 . + . ID=GSCOCP00034323001;Dbxref=GENE3D:G3DSA:1.10.472.10,InterPro:IPR004367,InterPro:IPR006670,InterPro:IPR006671,InterPro:IPR011028,InterPro:IPR013763,InterPro:IPR014400,PFAM:PF00134,PFAM:PF02984,PIR:PIRSF001771,SMART:SM00385,SUPERFAMILY:SSF47954,SwissProt:A2YH60,SwissProt:Q0D9C7,SwissProt:Q9LDM4,TAIR:AT1G20610.1,TAIR:AT1G76310.1,TAIR:AT2G17620.1,TrEMBL:A5C7C9,TrEMBL:E0CQ49,TrEMBL:G3G857;Derives_from=GSCOCT00034323001;Name=Cc10_g08910;Ontology_term=CC_evidence_code:ISS,GO:0005634,CC_EC_number:missing_EC_number,PRODUCT:Cyclin-B2-2,CC_functional_completeness:fragment,CC_gene:CYCB2-2,CC_gene:CYCB2-3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034323001~ Cyclin-B2-2~ CYCB2-2~ fragment;original_location=complement(join(675936..675981%2C674628..674665%2C674306..674527%2C674110..674208%2C673850..674026));owner=coffea | |
| 43275 chr10 manual_curation exon 8387176 8387352 . + . Parent=GSCOCT00034323001 | |
| 43276 chr10 manual_curation exon 8386994 8387092 . + . Parent=GSCOCT00034323001 | |
| 43277 chr10 manual_curation exon 8386675 8386896 . + . Parent=GSCOCT00034323001 | |
| 43278 chr10 manual_curation exon 8386537 8386574 . + . Parent=GSCOCT00034323001 | |
| 43279 chr10 manual_curation exon 8385221 8385266 . + . Parent=GSCOCT00034323001 | |
| 43280 chr10 manual_curation CDS 8387176 8387352 . + 0 Parent=GSCOCT00034323001 | |
| 43281 chr10 manual_curation CDS 8386994 8387092 . + 0 Parent=GSCOCT00034323001 | |
| 43282 chr10 manual_curation CDS 8386675 8386896 . + 0 Parent=GSCOCT00034323001 | |
| 43283 chr10 manual_curation CDS 8386537 8386574 . + 1 Parent=GSCOCT00034323001 | |
| 43284 chr10 manual_curation CDS 8385221 8385266 . + 0 Parent=GSCOCT00034323001 | |
| 43285 chr10 manual_curation gene 8397938 8400481 . - . ID=GSCOCG00034322001;Name=Cc10_g08920 | |
| 43286 chr10 manual_curation mRNA 8397938 8400481 . - . ID=GSCOCT00034322001;Parent=GSCOCG00034322001;Name=Cc10_g08920 | |
| 43287 chr10 manual_curation polypeptide 8397938 8400481 . - . ID=GSCOCP00034322001;Dbxref=InterPro:IPR002921,PFAM:PF01764,TAIR:AT1G45201.1,TAIR:AT1G56630.1,TAIR:AT5G42930.1,TrEMBL:B9MVS3,TrEMBL:B9R7B0,TrEMBL:F6H1C8;Derives_from=GSCOCT00034322001;Name=Cc10_g08920;Ontology_term=CC_evidence_code:ISS,GO:0004806,GO:0006629,CC_EC_number:missing_EC_number,PRODUCT:alpha/beta-Hydrolases superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034322001~ alpha/beta-Hydrolases superfamily protein~ unknown_gene~ complete;original_location=join(660721..661027%2C661375..661568%2C661673..661706%2C662252..662871%2C662992..663264);owner=coffea | |
| 43288 chr10 manual_curation exon 8400175 8400481 . - . Parent=GSCOCT00034322001 | |
| 43289 chr10 manual_curation exon 8399634 8399827 . - . Parent=GSCOCT00034322001 | |
| 43290 chr10 manual_curation exon 8399496 8399529 . - . Parent=GSCOCT00034322001 | |
| 43291 chr10 manual_curation exon 8398331 8398950 . - . Parent=GSCOCT00034322001 | |
| 43292 chr10 manual_curation exon 8397938 8398210 . - . Parent=GSCOCT00034322001 | |
| 43293 chr10 manual_curation CDS 8400175 8400481 . - 0 Parent=GSCOCT00034322001 | |
| 43294 chr10 manual_curation CDS 8399634 8399827 . - 1 Parent=GSCOCT00034322001 | |
| 43295 chr10 manual_curation CDS 8399496 8399529 . - 0 Parent=GSCOCT00034322001 | |
| 43296 chr10 manual_curation CDS 8398331 8398950 . - 1 Parent=GSCOCT00034322001 | |
| 43297 chr10 manual_curation CDS 8397938 8398210 . - 0 Parent=GSCOCT00034322001 | |
| 43298 chr10 manual_curation gene 8402612 8403400 . - . ID=GSCOCG00034321001;Name=Cc10_g08930 | |
| 43299 chr10 manual_curation mRNA 8402612 8403400 . - . ID=GSCOCT00034321001;Parent=GSCOCG00034321001;Name=Cc10_g08930 | |
| 43300 chr10 manual_curation polypeptide 8402612 8403400 . - . ID=GSCOCP00034321001;Dbxref=TAIR:AT1G45201.1,TAIR:AT1G56630.1,TAIR:AT5G42930.1,TrEMBL:A2YAK4,TrEMBL:B9MVS3,TrEMBL:F6H1C8;Derives_from=GSCOCT00034321001;Name=Cc10_g08930;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Predicted protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034321001~ Putative Predicted protein~ unknown_gene~ fragment;original_location=join(657802..657966%2C658306..658590);owner=coffea | |
| 43301 chr10 manual_curation exon 8403236 8403400 . - . Parent=GSCOCT00034321001 | |
| 43302 chr10 manual_curation exon 8402612 8402896 . - . Parent=GSCOCT00034321001 | |
| 43303 chr10 manual_curation CDS 8403236 8403400 . - 0 Parent=GSCOCT00034321001 | |
| 43304 chr10 manual_curation CDS 8402612 8402896 . - 0 Parent=GSCOCT00034321001 | |
| 43305 chr10 manual_curation gene 8460134 8462675 . - . ID=GSCOCG00034320001;Name=Cc10_g08940 | |
| 43306 chr10 manual_curation mRNA 8460134 8462675 . - . ID=GSCOCT00034320001;Parent=GSCOCG00034320001;Name=Cc10_g08940 | |
| 43307 chr10 manual_curation polypeptide 8460134 8462675 . - . ID=GSCOCP00034320001;Dbxref=InterPro:IPR002921,PFAM:PF01764,TAIR:AT1G45201.1,TAIR:AT1G56630.1,TAIR:AT5G42930.1,TrEMBL:B9MVS3,TrEMBL:B9R7B0,TrEMBL:F6H1C8;Derives_from=GSCOCT00034320001;Name=Cc10_g08940;Ontology_term=CC_evidence_code:ISS,GO:0004806,GO:0006629,CC_EC_number:missing_EC_number,PRODUCT:alpha/beta-Hydrolases superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034320001~ alpha/beta-Hydrolases superfamily protein~ unknown_gene~ complete;original_location=join(598527..598833%2C599173..599366%2C599477..599510%2C600056..600675%2C600796..601068);owner=coffea | |
| 43308 chr10 manual_curation exon 8462369 8462675 . - . Parent=GSCOCT00034320001 | |
| 43309 chr10 manual_curation exon 8461836 8462029 . - . Parent=GSCOCT00034320001 | |
| 43310 chr10 manual_curation exon 8461692 8461725 . - . Parent=GSCOCT00034320001 | |
| 43311 chr10 manual_curation exon 8460527 8461146 . - . Parent=GSCOCT00034320001 | |
| 43312 chr10 manual_curation exon 8460134 8460406 . - . Parent=GSCOCT00034320001 | |
| 43313 chr10 manual_curation CDS 8462369 8462675 . - 0 Parent=GSCOCT00034320001 | |
| 43314 chr10 manual_curation CDS 8461836 8462029 . - 1 Parent=GSCOCT00034320001 | |
| 43315 chr10 manual_curation CDS 8461692 8461725 . - 0 Parent=GSCOCT00034320001 | |
| 43316 chr10 manual_curation CDS 8460527 8461146 . - 1 Parent=GSCOCT00034320001 | |
| 43317 chr10 manual_curation CDS 8460134 8460406 . - 0 Parent=GSCOCT00034320001 | |
| 43318 chr10 manual_curation gene 8466385 8468109 . - . ID=GSCOCG00034319001;Name=Cc10_g08950 | |
| 43319 chr10 manual_curation mRNA 8466385 8468109 . - . ID=GSCOCT00034319001;Parent=GSCOCG00034319001;Name=Cc10_g08950 | |
| 43320 chr10 manual_curation polypeptide 8466385 8468109 . - . ID=GSCOCP00034319001;Dbxref=InterPro:IPR002921,PFAM:PF01764,TAIR:AT1G45201.1,TAIR:AT1G56630.1,TAIR:AT5G42930.1,TrEMBL:B9MVS2,TrEMBL:B9MVS3,TrEMBL:B9R7B0;Derives_from=GSCOCT00034319001;Name=Cc10_g08950;Ontology_term=CC_evidence_code:ISS,GO:0004806,GO:0006629,CC_EC_number:missing_EC_number,PRODUCT:Putative alpha/beta-Hydrolases superfamily protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034319001~ Putative alpha/beta-Hydrolases superfamily protein~ unknown_gene~ fragment;original_location=join(593093..593158%2C593290..593327%2C594230..594441%2C594522..594817);owner=coffea | |
| 43321 chr10 manual_curation exon 8468044 8468109 . - . Parent=GSCOCT00034319001 | |
| 43322 chr10 manual_curation exon 8467875 8467912 . - . Parent=GSCOCT00034319001 | |
| 43323 chr10 manual_curation exon 8466761 8466972 . - . Parent=GSCOCT00034319001 | |
| 43324 chr10 manual_curation exon 8466385 8466680 . - . Parent=GSCOCT00034319001 | |
| 43325 chr10 manual_curation CDS 8468044 8468109 . - 0 Parent=GSCOCT00034319001 | |
| 43326 chr10 manual_curation CDS 8467875 8467912 . - 0 Parent=GSCOCT00034319001 | |
| 43327 chr10 manual_curation CDS 8466761 8466972 . - 2 Parent=GSCOCT00034319001 | |
| 43328 chr10 manual_curation CDS 8466385 8466680 . - 1 Parent=GSCOCT00034319001 | |
| 43329 chr10 manual_curation gene 8494948 8497181 . - . ID=GSCOCG00034317001;Name=Cc10_g08960 | |
| 43330 chr10 manual_curation mRNA 8494948 8497181 . - . ID=GSCOCT00034317001;Parent=GSCOCG00034317001;Name=Cc10_g08960 | |
| 43331 chr10 manual_curation polypeptide 8495186 8497181 . - . ID=GSCOCP00034317001;Dbxref=TAIR:AT3G18670.1,TAIR:AT5G04700.1,TAIR:AT5G04730.1,TrEMBL:A5C2E8,TrEMBL:F6HLW7,TrEMBL:I1N0F2;Derives_from=GSCOCT00034317001;Name=Cc10_g08960;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034317001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(564021..564923%2C565354..566016);owner=coffea | |
| 43332 chr10 manual_curation exon 8496279 8497181 . - . Parent=GSCOCT00034317001 | |
| 43333 chr10 manual_curation exon 8494948 8495848 . - . Parent=GSCOCT00034317001 | |
| 43334 chr10 manual_curation CDS 8496279 8497181 . - 0 Parent=GSCOCT00034317001 | |
| 43335 chr10 manual_curation CDS 8495186 8495848 . - 0 Parent=GSCOCT00034317001 | |
| 43336 chr10 manual_curation gene 8505130 8507801 . - . ID=GSCOCG00034316001;Name=Cc10_g08970 | |
| 43337 chr10 manual_curation mRNA 8505130 8507801 . - . ID=GSCOCT00034316001;Parent=GSCOCG00034316001;Name=Cc10_g08970 | |
| 43338 chr10 manual_curation polypeptide 8505130 8507687 . - . ID=GSCOCP00034316001;Dbxref=GENE3D:G3DSA:1.25.40.20,InterPro:IPR002110,InterPro:IPR020683,PROFILE:PS50088,PROFILE:PS50297,SMART:SM00248,SUPERFAMILY:SSF48403,TAIR:AT3G18670.1,TAIR:AT3G54070.1,TAIR:AT5G35830.1,TrEMBL:G7J1G8,TrEMBL:G7KD39,TrEMBL:I1N0F2;Derives_from=GSCOCT00034316001;Name=Cc10_g08970;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Ankyrin repeat-containing protein (Fragment),CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034316001~ Putative Ankyrin repeat-containing protein (Fragment)~ unknown_gene~ fragment;original_location=join(553515..553593%2C554507..555067%2C555459..555608%2C555948..556072);owner=coffea | |
| 43339 chr10 manual_curation exon 8507609 8507801 . - . Parent=GSCOCT00034316001 | |
| 43340 chr10 manual_curation exon 8506135 8506695 . - . Parent=GSCOCT00034316001 | |
| 43341 chr10 manual_curation exon 8505594 8505743 . - . Parent=GSCOCT00034316001 | |
| 43342 chr10 manual_curation exon 8505130 8505254 . - . Parent=GSCOCT00034316001 | |
| 43343 chr10 manual_curation CDS 8507609 8507687 . - 0 Parent=GSCOCT00034316001 | |
| 43344 chr10 manual_curation CDS 8506135 8506695 . - 1 Parent=GSCOCT00034316001 | |
| 43345 chr10 manual_curation CDS 8505594 8505743 . - 1 Parent=GSCOCT00034316001 | |
| 43346 chr10 manual_curation CDS 8505130 8505254 . - 1 Parent=GSCOCT00034316001 | |
| 43347 chr10 manual_curation gene 8561598 8567474 . - . ID=GSCOCG00034315001;Name=Cc10_g08980 | |
| 43348 chr10 manual_curation mRNA 8561598 8567474 . - . ID=GSCOCT00034315001;Parent=GSCOCG00034315001;Name=Cc10_g08980 | |
| 43349 chr10 manual_curation polypeptide 8561598 8567474 . - . ID=GSCOCP00034315001;Derives_from=GSCOCT00034315001;Name=Cc10_g08980;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034315001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(493728..493857%2C495442..495558%2C498520..499604);owner=coffea | |
| 43350 chr10 manual_curation exon 8567345 8567474 . - . Parent=GSCOCT00034315001 | |
| 43351 chr10 manual_curation exon 8565644 8565760 . - . Parent=GSCOCT00034315001 | |
| 43352 chr10 manual_curation exon 8561598 8562682 . - . Parent=GSCOCT00034315001 | |
| 43353 chr10 manual_curation CDS 8567345 8567474 . - 0 Parent=GSCOCT00034315001 | |
| 43354 chr10 manual_curation CDS 8565644 8565760 . - 1 Parent=GSCOCT00034315001 | |
| 43355 chr10 manual_curation CDS 8561598 8562682 . - 1 Parent=GSCOCT00034315001 | |
| 43356 chr10 manual_curation gene 8567773 8569092 . - . ID=GSCOCG00034314001;Name=Cc10_g08990 | |
| 43357 chr10 manual_curation mRNA 8567773 8569092 . - . ID=GSCOCT00034314001;Parent=GSCOCG00034314001;Name=Cc10_g08990 | |
| 43358 chr10 manual_curation polypeptide 8567773 8569092 . - . ID=GSCOCP00034314001;Dbxref=GENE3D:G3DSA:1.25.40.20,InterPro:IPR002110,InterPro:IPR020683,PROFILE:PS50297,SMART:SM00248,SUPERFAMILY:SSF48403,TAIR:AT5G35830.1,TrEMBL:G7J1G8,TrEMBL:G7KD39,TrEMBL:I1N0F2;Derives_from=GSCOCT00034314001;Name=Cc10_g08990;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034314001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(492110..492218%2C492723..493429);owner=coffea | |
| 43359 chr10 manual_curation exon 8568984 8569092 . - . Parent=GSCOCT00034314001 | |
| 43360 chr10 manual_curation exon 8567773 8568479 . - . Parent=GSCOCT00034314001 | |
| 43361 chr10 manual_curation CDS 8568984 8569092 . - 0 Parent=GSCOCT00034314001 | |
| 43362 chr10 manual_curation CDS 8567773 8568479 . - 1 Parent=GSCOCT00034314001 | |
| 43363 chr10 manual_curation gene 8617082 8617681 . + . ID=GSCOCG00034312001;Name=Cc10_g09000 | |
| 43364 chr10 manual_curation mRNA 8617082 8617681 . + . ID=GSCOCT00034312001;Parent=GSCOCG00034312001;Name=Cc10_g09000 | |
| 43365 chr10 manual_curation polypeptide 8617082 8617681 . + . ID=GSCOCP00034312001;Dbxref=GENE3D:G3DSA:3.30.720.10,InterPro:IPR003210,InterPro:IPR009018,PANTHER:PTHR12013,PFAM:PF02290,PRODOM:PD009170,SUPERFAMILY:SSF54762,SwissProt:O04421,SwissProt:O04433,TAIR:AT2G43640.1,TrEMBL:C6T2Q3,TrEMBL:D7LKG6,TrEMBL:G7ZWF3;Derives_from=GSCOCT00034312001;Name=Cc10_g09000;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0006614,GO:0008312,GO:0030942,GO:0045900,GO:0048500,CC_EC_number:missing_EC_number,PRODUCT:Putative Signal recognition particle%2C SRP14 subunit,CC_functional_completeness:complete,CC_gene:SRP14;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034312001~ Putative Signal recognition particle%2C SRP14 subunit~ SRP14~ complete;original_location=complement(join(443949..444120%2C443777..443854%2C443521..443615));owner=coffea | |
| 43366 chr10 manual_curation exon 8617587 8617681 . + . Parent=GSCOCT00034312001 | |
| 43367 chr10 manual_curation exon 8617348 8617425 . + . Parent=GSCOCT00034312001 | |
| 43368 chr10 manual_curation exon 8617082 8617253 . + . Parent=GSCOCT00034312001 | |
| 43369 chr10 manual_curation CDS 8617587 8617681 . + 1 Parent=GSCOCT00034312001 | |
| 43370 chr10 manual_curation CDS 8617348 8617425 . + 1 Parent=GSCOCT00034312001 | |
| 43371 chr10 manual_curation CDS 8617082 8617253 . + 0 Parent=GSCOCT00034312001 | |
| 43372 chr10 manual_curation gene 8669929 8676785 . - . ID=GSCOCG00034310001;Name=Cc10_g09010 | |
| 43373 chr10 manual_curation mRNA 8669929 8676785 . - . ID=GSCOCT00034310001;Parent=GSCOCG00034310001;Name=Cc10_g09010 | |
| 43374 chr10 manual_curation polypeptide 8669929 8676785 . - . ID=GSCOCP00034310001;Dbxref=GENE3D:G3DSA:1.25.40.20,InterPro:IPR002110,InterPro:IPR020683,PROFILE:PS50297,SMART:SM00248,SUPERFAMILY:SSF48403,TAIR:AT3G18670.1,TAIR:AT5G04700.1,TAIR:AT5G04730.1,TrEMBL:A5C2E8,TrEMBL:F6HLW7,TrEMBL:I1N0F2;Derives_from=GSCOCT00034310001;Name=Cc10_g09010;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034310001~ Putative Uncharacterized protein~ unknown_gene~ modules;original_location=join(384417..384516%2C385462..386040%2C386338..386487%2C386846..386962%2C389320..390182%2C390614..391273);owner=coffea | |
| 43375 chr10 manual_curation exon 8676686 8676785 . - . Parent=GSCOCT00034310001 | |
| 43376 chr10 manual_curation exon 8675162 8675740 . - . Parent=GSCOCT00034310001 | |
| 43377 chr10 manual_curation exon 8674715 8674864 . - . Parent=GSCOCT00034310001 | |
| 43378 chr10 manual_curation exon 8674240 8674356 . - . Parent=GSCOCT00034310001 | |
| 43379 chr10 manual_curation exon 8671020 8671882 . - . Parent=GSCOCT00034310001 | |
| 43380 chr10 manual_curation exon 8669929 8670588 . - . Parent=GSCOCT00034310001 | |
| 43381 chr10 manual_curation CDS 8676686 8676785 . - 0 Parent=GSCOCT00034310001 | |
| 43382 chr10 manual_curation CDS 8675162 8675740 . - 1 Parent=GSCOCT00034310001 | |
| 43383 chr10 manual_curation CDS 8674715 8674864 . - 1 Parent=GSCOCT00034310001 | |
| 43384 chr10 manual_curation CDS 8674240 8674356 . - 1 Parent=GSCOCT00034310001 | |
| 43385 chr10 manual_curation CDS 8671020 8671882 . - 1 Parent=GSCOCT00034310001 | |
| 43386 chr10 manual_curation CDS 8669929 8670588 . - 0 Parent=GSCOCT00034310001 | |
| 43387 chr10 manual_curation gene 8682347 8685964 . + . ID=GSCOCG00034309001;Name=Cc10_g09020 | |
| 43388 chr10 manual_curation mRNA 8682347 8685964 . + . ID=GSCOCT00034309001;Parent=GSCOCG00034309001;Name=Cc10_g09020 | |
| 43389 chr10 manual_curation polypeptide 8683426 8685828 . + . ID=GSCOCP00034309001;Dbxref=GENE3D:G3DSA:3.30.720.10,InterPro:IPR003210,InterPro:IPR009018,PANTHER:PTHR12013,PFAM:PF02290,PRODOM:PD009170,SUPERFAMILY:SSF54762,SwissProt:O04421,SwissProt:O04433,SwissProt:Q4R5C7,TAIR:AT2G43640.1,TrEMBL:C6T2Q3,TrEMBL:G7ZWF3,TrEMBL:I1L5R5;Derives_from=GSCOCT00034309001;Name=Cc10_g09020;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0006614,GO:0008312,GO:0030942,GO:0045900,GO:0048500,CC_EC_number:missing_EC_number,PRODUCT:Signal recognition particle 14 kDa protein,CC_functional_completeness:complete,CC_gene:SRP14;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034309001~ Signal recognition particle 14 kDa protein~ SRP14~ complete;original_location=complement(join(377738..377776%2C377166..377259%2C376895..377004%2C375374..375517));owner=coffea | |
| 43390 chr10 manual_curation exon 8682347 8682508 . + . Parent=GSCOCT00034309001 | |
| 43391 chr10 manual_curation exon 8685685 8685964 . + . Parent=GSCOCT00034309001 | |
| 43392 chr10 manual_curation exon 8684198 8684307 . + . Parent=GSCOCT00034309001 | |
| 43393 chr10 manual_curation exon 8683943 8684036 . + . Parent=GSCOCT00034309001 | |
| 43394 chr10 manual_curation exon 8683425 8683464 . + . Parent=GSCOCT00034309001 | |
| 43395 chr10 manual_curation CDS 8685685 8685828 . + 0 Parent=GSCOCT00034309001 | |
| 43396 chr10 manual_curation CDS 8684198 8684307 . + 1 Parent=GSCOCT00034309001 | |
| 43397 chr10 manual_curation CDS 8683943 8684036 . + 0 Parent=GSCOCT00034309001 | |
| 43398 chr10 manual_curation CDS 8683426 8683464 . + 0 Parent=GSCOCT00034309001 | |
| 43399 chr10 manual_curation gene 8723231 8723599 . + . ID=GSCOCG00034308001;Name=Cc10_g09030 | |
| 43400 chr10 manual_curation mRNA 8723231 8723599 . + . ID=GSCOCT00034308001;Parent=GSCOCG00034308001;Name=Cc10_g09030 | |
| 43401 chr10 manual_curation polypeptide 8723231 8723599 . + . ID=GSCOCP00034308001;Dbxref=InterPro:IPR000719,InterPro:IPR011009,InterPro:IPR017442,PFAM:PF00069,PROFILE:PS50011,SUPERFAMILY:SSF56112,SwissProt:Q8RY67,SwissProt:Q9LZM4,SwissProt:Q9M342,TAIR:AT2G23450.2,TAIR:AT3G53840.1,TAIR:AT5G02070.1,TrEMBL:A2Q0R1,TrEMBL:B9HMM0,TrEMBL:F6HNU0;Derives_from=GSCOCT00034308001;Name=Cc10_g09030;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0005524,GO:0006468,CC_EC_number:missing_EC_number,PRODUCT:Putative Wall-associated receptor kinase-like 20,CC_functional_completeness:fragment,CC_gene:WAKL20,CC_gene:WAKL15,CC_gene:WAKL14;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034308001~ Putative Wall-associated receptor kinase-like 20~ WAKL20~ fragment;original_location=complement(337603..337971);owner=coffea | |
| 43402 chr10 manual_curation exon 8723231 8723599 . + . Parent=GSCOCT00034308001 | |
| 43403 chr10 manual_curation CDS 8723231 8723599 . + 0 Parent=GSCOCT00034308001 | |
| 43404 chr10 manual_curation gene 8727314 8727926 . - . ID=GSCOCG00034306001;Name=Cc10_g09040 | |
| 43405 chr10 manual_curation mRNA 8727314 8727926 . - . ID=GSCOCT00034306001;Parent=GSCOCG00034306001;Name=Cc10_g09040 | |
| 43406 chr10 manual_curation polypeptide 8727314 8727926 . - . ID=GSCOCP00034306001;Dbxref=InterPro:IPR001353,PFAM:PF00227,SwissProt:O23710,SwissProt:Q54QR2,SwissProt:Q7DLS1,TAIR:AT3G27430.2,TAIR:AT5G40580.1,TrEMBL:D7LPH0,TrEMBL:D7MJ59,TrEMBL:F4KIN7;Derives_from=GSCOCT00034306001;Name=Cc10_g09040;Ontology_term=CC_evidence_code:ISS,GO:0004298,GO:0005839,GO:0051603,CC_EC_number:missing_EC_number,PRODUCT:Putative Proteasome%2C subunit alpha/beta,CC_functional_completeness:complete,CC_gene:PBB2,CC_gene:PBB1,CC_gene:psmB7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034306001~ Putative Proteasome%2C subunit alpha/beta~ PBB2~ complete;original_location=join(333276..333321%2C333407..333456%2C333543..333647%2C333733..333888);owner=coffea | |
| 43407 chr10 manual_curation exon 8727881 8727926 . - . Parent=GSCOCT00034306001 | |
| 43408 chr10 manual_curation exon 8727746 8727795 . - . Parent=GSCOCT00034306001 | |
| 43409 chr10 manual_curation exon 8727555 8727659 . - . Parent=GSCOCT00034306001 | |
| 43410 chr10 manual_curation exon 8727314 8727469 . - . Parent=GSCOCT00034306001 | |
| 43411 chr10 manual_curation CDS 8727881 8727926 . - 0 Parent=GSCOCT00034306001 | |
| 43412 chr10 manual_curation CDS 8727746 8727795 . - 1 Parent=GSCOCT00034306001 | |
| 43413 chr10 manual_curation CDS 8727555 8727659 . - 0 Parent=GSCOCT00034306001 | |
| 43414 chr10 manual_curation CDS 8727314 8727469 . - 0 Parent=GSCOCT00034306001 | |
| 43415 chr10 manual_curation gene 8750159 8752993 . + . ID=GSCOCG00034304001;Name=Cc10_g09050 | |
| 43416 chr10 manual_curation mRNA 8750159 8752993 . + . ID=GSCOCT00034304001;Parent=GSCOCG00034304001;Name=Cc10_g09050 | |
| 43417 chr10 manual_curation polypeptide 8750525 8752993 . + . ID=GSCOCP00034304001;Dbxref=InterPro:IPR000048,PFAM:PF00612,PROFILE:PS50096,TAIR:AT3G52290.1,TAIR:AT5G35670.1,TrEMBL:A5BAD4,TrEMBL:B9SSH6,TrEMBL:F6HI94;Derives_from=GSCOCT00034304001;Name=Cc10_g09050;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative IQ-domain 33,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034304001~ Putative IQ-domain 33~ unknown_gene~ complete;original_location=complement(join(310603..310677%2C310002..310388%2C309559..309762%2C308731..308844%2C308306..308660%2C308209..308225));owner=coffea | |
| 43418 chr10 manual_curation exon 8752977 8752993 . + . Parent=GSCOCT00034304001 | |
| 43419 chr10 manual_curation exon 8752542 8752896 . + . Parent=GSCOCT00034304001 | |
| 43420 chr10 manual_curation exon 8752358 8752471 . + . Parent=GSCOCT00034304001 | |
| 43421 chr10 manual_curation exon 8751440 8751643 . + . Parent=GSCOCT00034304001 | |
| 43422 chr10 manual_curation exon 8750814 8751200 . + . Parent=GSCOCT00034304001 | |
| 43423 chr10 manual_curation exon 8750159 8750599 . + . Parent=GSCOCT00034304001 | |
| 43424 chr10 manual_curation CDS 8752977 8752993 . + 1 Parent=GSCOCT00034304001 | |
| 43425 chr10 manual_curation CDS 8752542 8752896 . + 0 Parent=GSCOCT00034304001 | |
| 43426 chr10 manual_curation CDS 8752358 8752471 . + 0 Parent=GSCOCT00034304001 | |
| 43427 chr10 manual_curation CDS 8751440 8751643 . + 0 Parent=GSCOCT00034304001 | |
| 43428 chr10 manual_curation CDS 8750814 8751200 . + 0 Parent=GSCOCT00034304001 | |
| 43429 chr10 manual_curation CDS 8750525 8750599 . + 0 Parent=GSCOCT00034304001 | |
| 43430 chr10 manual_curation gene 8755213 8757362 . - . ID=GSCOCG00034302001;Name=Cc10_g09060 | |
| 43431 chr10 manual_curation mRNA 8755213 8757362 . - . ID=GSCOCT00034302001;Parent=GSCOCG00034302001;Name=Cc10_g09060 | |
| 43432 chr10 manual_curation polypeptide 8755329 8757362 . - . ID=GSCOCP00034302001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q4V389,SwissProt:Q9C9I6,SwissProt:Q9LFL5,TAIR:AT1G22830.1,TAIR:AT1G71490.1,TAIR:AT5G16860.1,TIGRFAMs:TIGR00756,TrEMBL:A5B8I8,TrEMBL:B9IQB0,TrEMBL:F6HN35;Derives_from=GSCOCT00034302001;Name=Cc10_g09060;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At1g71490,CC_functional_completeness:complete,CC_gene:PCMP-E67,CC_gene:PCMP-E24,CC_gene:PCMP-H92;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034302001~ Pentatricopeptide repeat-containing protein At1g71490~ PCMP-E67~ complete;original_location=303840..305873;owner=coffea | |
| 43433 chr10 manual_curation exon 8755213 8757362 . - . Parent=GSCOCT00034302001 | |
| 43434 chr10 manual_curation CDS 8755329 8757362 . - 0 Parent=GSCOCT00034302001 | |
| 43435 chr10 manual_curation gene 8761276 8773798 . + . ID=GSCOCG00034300001;Name=Cc10_g09070 | |
| 43436 chr10 manual_curation mRNA 8761276 8773798 . + . ID=GSCOCT00034300001;Parent=GSCOCG00034300001;Name=Cc10_g09070 | |
| 43437 chr10 manual_curation polypeptide 8761471 8773798 . + . ID=GSCOCP00034300001;Dbxref=InterPro:IPR000073,PFAM:PF00561,SwissProt:Q0V9K2,SwissProt:Q2TAP9,SwissProt:Q57427,TAIR:AT3G52570.1,TAIR:AT4G10030.1,TrEMBL:B9SPW6,TrEMBL:F6HN36,TrEMBL:G7K7Z0;Derives_from=GSCOCT00034300001;Name=Cc10_g09070;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Abhydrolase domain-containing protein 11,CC_functional_completeness:modules,CC_gene:abhd11,CC_gene:HI_0193;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034300001~ Putative Abhydrolase domain-containing protein 11~ abhd11~ modules;original_location=complement(join(299585..299731%2C298776..298889%2C298625..298651%2C296668..296758%2C295214..295257%2C294333..294431%2C292178..292235%2C292009..292061%2C290967..291068%2C288930..288995%2C288211..288332%2C287726..287897%2C287404..287466));owner=coffea | |
| 43438 chr10 manual_curation exon 8773736 8773798 . + . Parent=GSCOCT00034300001 | |
| 43439 chr10 manual_curation exon 8773305 8773476 . + . Parent=GSCOCT00034300001 | |
| 43440 chr10 manual_curation exon 8772870 8772991 . + . Parent=GSCOCT00034300001 | |
| 43441 chr10 manual_curation exon 8772207 8772272 . + . Parent=GSCOCT00034300001 | |
| 43442 chr10 manual_curation exon 8770134 8770235 . + . Parent=GSCOCT00034300001 | |
| 43443 chr10 manual_curation exon 8769141 8769193 . + . Parent=GSCOCT00034300001 | |
| 43444 chr10 manual_curation exon 8768967 8769024 . + . Parent=GSCOCT00034300001 | |
| 43445 chr10 manual_curation exon 8766771 8766869 . + . Parent=GSCOCT00034300001 | |
| 43446 chr10 manual_curation exon 8765945 8765988 . + . Parent=GSCOCT00034300001 | |
| 43447 chr10 manual_curation exon 8764444 8764534 . + . Parent=GSCOCT00034300001 | |
| 43448 chr10 manual_curation exon 8762551 8762577 . + . Parent=GSCOCT00034300001 | |
| 43449 chr10 manual_curation exon 8762313 8762426 . + . Parent=GSCOCT00034300001 | |
| 43450 chr10 manual_curation exon 8761276 8761617 . + . Parent=GSCOCT00034300001 | |
| 43451 chr10 manual_curation CDS 8773736 8773798 . + 0 Parent=GSCOCT00034300001 | |
| 43452 chr10 manual_curation CDS 8773305 8773476 . + 2 Parent=GSCOCT00034300001 | |
| 43453 chr10 manual_curation CDS 8772870 8772991 . + 0 Parent=GSCOCT00034300001 | |
| 43454 chr10 manual_curation CDS 8772207 8772272 . + 0 Parent=GSCOCT00034300001 | |
| 43455 chr10 manual_curation CDS 8770134 8770235 . + 0 Parent=GSCOCT00034300001 | |
| 43456 chr10 manual_curation CDS 8769141 8769193 . + 1 Parent=GSCOCT00034300001 | |
| 43457 chr10 manual_curation CDS 8768967 8769024 . + 0 Parent=GSCOCT00034300001 | |
| 43458 chr10 manual_curation CDS 8766771 8766869 . + 0 Parent=GSCOCT00034300001 | |
| 43459 chr10 manual_curation CDS 8765945 8765988 . + 1 Parent=GSCOCT00034300001 | |
| 43460 chr10 manual_curation CDS 8764444 8764534 . + 0 Parent=GSCOCT00034300001 | |
| 43461 chr10 manual_curation CDS 8762551 8762577 . + 0 Parent=GSCOCT00034300001 | |
| 43462 chr10 manual_curation CDS 8762313 8762426 . + 0 Parent=GSCOCT00034300001 | |
| 43463 chr10 manual_curation CDS 8761471 8761617 . + 0 Parent=GSCOCT00034300001 | |
| 43464 chr10 manual_curation gene 8773907 8779624 . - . ID=GSCOCG00034299001;Name=Cc10_g09080 | |
| 43465 chr10 manual_curation mRNA 8773907 8779624 . - . ID=GSCOCT00034299001;Parent=GSCOCG00034299001;Name=Cc10_g09080 | |
| 43466 chr10 manual_curation polypeptide 8774591 8779549 . - . ID=GSCOCP00034299001;Dbxref=InterPro:IPR006502,PFAM:PF04720,TAIR:AT2G20670.1,TAIR:AT3G07350.1,TAIR:AT4G32480.1,TIGRFAMs:TIGR01615,TrEMBL:A5C2L3,TrEMBL:B9IQA8,TrEMBL:D7TLG0;Derives_from=GSCOCT00034299001;Name=Cc10_g09080;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Predicted protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034299001~ Predicted protein~ unknown_gene~ modules;original_location=join(281653..281940%2C284860..285082%2C286271..286611);owner=coffea | |
| 43467 chr10 manual_curation exon 8779262 8779624 . - . Parent=GSCOCT00034299001 | |
| 43468 chr10 manual_curation exon 8776120 8776342 . - . Parent=GSCOCT00034299001 | |
| 43469 chr10 manual_curation exon 8773907 8774931 . - . Parent=GSCOCT00034299001 | |
| 43470 chr10 manual_curation CDS 8779262 8779549 . - 0 Parent=GSCOCT00034299001 | |
| 43471 chr10 manual_curation CDS 8776120 8776342 . - 0 Parent=GSCOCT00034299001 | |
| 43472 chr10 manual_curation CDS 8774591 8774931 . - 1 Parent=GSCOCT00034299001 | |
| 43473 chr10 manual_curation gene 8780011 8784365 . - . ID=GSCOCG00034298001;Name=Cc10_g09090 | |
| 43474 chr10 manual_curation mRNA 8780011 8784365 . - . ID=GSCOCT00034298001;Parent=GSCOCG00034298001;Name=Cc10_g09090 | |
| 43475 chr10 manual_curation polypeptide 8780011 8784365 . - . ID=GSCOCP00034298001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR001611,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR020635,PFAM:PF00560,PFAM:PF07714,PROFILE:PS50011,PROSITE:PS00107,SMART:SM00219,SUPERFAMILY:SSF56112,SwissProt:C0LGP4,SwissProt:Q8VZG8,SwissProt:Q9FL28,TAIR:AT3G47570.1,TAIR:AT4G08850.1,TAIR:AT5G46330.1,TrEMBL:A5AE09,TrEMBL:A5BAC2,TrEMBL:F6H511;Derives_from=GSCOCT00034298001;Name=Cc10_g09090;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At4g08850,CC_functional_completeness:complete,CC_gene:At4g08850,CC_gene:FLS2,CC_gene:At3g47570;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034298001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At4g08850~ At4g08850~ complete;original_location=join(276837..276968%2C277389..277757%2C277840..278089%2C278314..278638%2C278729..279034%2C279101..279377%2C279450..279959%2C280202..280298%2C280438..280757%2C281054..281191);owner=coffea | |
| 43476 chr10 manual_curation exon 8784234 8784365 . - . Parent=GSCOCT00034298001 | |
| 43477 chr10 manual_curation exon 8783445 8783813 . - . Parent=GSCOCT00034298001 | |
| 43478 chr10 manual_curation exon 8783113 8783362 . - . Parent=GSCOCT00034298001 | |
| 43479 chr10 manual_curation exon 8782564 8782888 . - . Parent=GSCOCT00034298001 | |
| 43480 chr10 manual_curation exon 8782168 8782473 . - . Parent=GSCOCT00034298001 | |
| 43481 chr10 manual_curation exon 8781825 8782101 . - . Parent=GSCOCT00034298001 | |
| 43482 chr10 manual_curation exon 8781243 8781752 . - . Parent=GSCOCT00034298001 | |
| 43483 chr10 manual_curation exon 8780904 8781000 . - . Parent=GSCOCT00034298001 | |
| 43484 chr10 manual_curation exon 8780445 8780764 . - . Parent=GSCOCT00034298001 | |
| 43485 chr10 manual_curation exon 8780011 8780148 . - . Parent=GSCOCT00034298001 | |
| 43486 chr10 manual_curation CDS 8784234 8784365 . - 0 Parent=GSCOCT00034298001 | |
| 43487 chr10 manual_curation CDS 8783445 8783813 . - 0 Parent=GSCOCT00034298001 | |
| 43488 chr10 manual_curation CDS 8783113 8783362 . - 0 Parent=GSCOCT00034298001 | |
| 43489 chr10 manual_curation CDS 8782564 8782888 . - 1 Parent=GSCOCT00034298001 | |
| 43490 chr10 manual_curation CDS 8782168 8782473 . - 2 Parent=GSCOCT00034298001 | |
| 43491 chr10 manual_curation CDS 8781825 8782101 . - 2 Parent=GSCOCT00034298001 | |
| 43492 chr10 manual_curation CDS 8781243 8781752 . - 0 Parent=GSCOCT00034298001 | |
| 43493 chr10 manual_curation CDS 8780904 8781000 . - 0 Parent=GSCOCT00034298001 | |
| 43494 chr10 manual_curation CDS 8780445 8780764 . - 1 Parent=GSCOCT00034298001 | |
| 43495 chr10 manual_curation CDS 8780011 8780148 . - 0 Parent=GSCOCT00034298001 | |
| 43496 chr10 manual_curation gene 8788857 8794052 . - . ID=GSCOCG00034296001;Name=Cc10_g09100 | |
| 43497 chr10 manual_curation mRNA 8788857 8794052 . - . ID=GSCOCT00034296001;Parent=GSCOCG00034296001;Name=Cc10_g09100 | |
| 43498 chr10 manual_curation polypeptide 8788958 8794052 . - . ID=GSCOCP00034296001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:C0LGQ5,SwissProt:Q9FIZ3,SwissProt:Q9FL28,TAIR:AT4G20140.1,TAIR:AT5G44700.1,TAIR:AT5G46330.1,TrEMBL:A5B0Q4,TrEMBL:A5C1H0,TrEMBL:F6H511;Derives_from=GSCOCT00034296001;Name=Cc10_g09100;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative LRR receptor-like serine/threonine-protein kinase GSO1,CC_functional_completeness:complete,CC_gene:GSO1,CC_gene:GSO2,CC_gene:FLS2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034296001~ Putative LRR receptor-like serine/threonine-protein kinase GSO1~ GSO1~ complete;original_location=join(267150..268059%2C268161..268523%2C269770..271767%2C271889..272244);owner=coffea | |
| 43499 chr10 manual_curation exon 8793143 8794052 . - . Parent=GSCOCT00034296001 | |
| 43500 chr10 manual_curation exon 8792679 8793041 . - . Parent=GSCOCT00034296001 | |
| 43501 chr10 manual_curation exon 8789435 8791432 . - . Parent=GSCOCT00034296001 | |
| 43502 chr10 manual_curation exon 8788857 8789313 . - . Parent=GSCOCT00034296001 | |
| 43503 chr10 manual_curation CDS 8793143 8794052 . - 0 Parent=GSCOCT00034296001 | |
| 43504 chr10 manual_curation CDS 8792679 8793041 . - 1 Parent=GSCOCT00034296001 | |
| 43505 chr10 manual_curation CDS 8789435 8791432 . - 1 Parent=GSCOCT00034296001 | |
| 43506 chr10 manual_curation CDS 8788958 8789313 . - 1 Parent=GSCOCT00034296001 | |
| 43507 chr10 manual_curation gene 8808278 8812894 . + . ID=GSCOCG00034295001;Name=Cc10_g09110 | |
| 43508 chr10 manual_curation mRNA 8808278 8812894 . + . ID=GSCOCT00034295001;Parent=GSCOCG00034295001;Name=Cc10_g09110 | |
| 43509 chr10 manual_curation polypeptide 8808278 8812474 . + . ID=GSCOCP00034295001;Dbxref=GENE3D:G3DSA:2.102.10.10,InterPro:IPR017941,PROFILE:PS51296,SUPERFAMILY:SSF50022,TAIR:AT1G71500.1,TrEMBL:A2ZCZ7,TrEMBL:B9NGG0,TrEMBL:Q53N80;Derives_from=GSCOCT00034295001;Name=Cc10_g09110;Ontology_term=CC_evidence_code:ISS,GO:0016491,GO:0055114,CC_EC_number:missing_EC_number,PRODUCT:Rieske (2Fe-2S) domain-containing protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034295001~ Rieske (2Fe-2S) domain-containing protein~ unknown_gene~ complete;original_location=complement(join(252517..252924%2C249011..249268%2C248728..248916));owner=coffea | |
| 43510 chr10 manual_curation exon 8812286 8812894 . + . Parent=GSCOCT00034295001 | |
| 43511 chr10 manual_curation exon 8811934 8812191 . + . Parent=GSCOCT00034295001 | |
| 43512 chr10 manual_curation exon 8808278 8808685 . + . Parent=GSCOCT00034295001 | |
| 43513 chr10 manual_curation CDS 8812286 8812474 . + 0 Parent=GSCOCT00034295001 | |
| 43514 chr10 manual_curation CDS 8811934 8812191 . + 0 Parent=GSCOCT00034295001 | |
| 43515 chr10 manual_curation CDS 8808278 8808685 . + 0 Parent=GSCOCT00034295001 | |
| 43516 chr10 manual_curation gene 8822354 8822860 . + . ID=GSCOCG00034294001;Name=Cc10_g09120 | |
| 43517 chr10 manual_curation mRNA 8822354 8822860 . + . ID=GSCOCT00034294001;Parent=GSCOCG00034294001;Name=Cc10_g09120 | |
| 43518 chr10 manual_curation polypeptide 8822354 8822860 . + . ID=GSCOCP00034294001;Dbxref=GENE3D:G3DSA:3.30.730.10,InterPro:IPR001471,InterPro:IPR016177,PFAM:PF00847,PRINTS:PR00367,PROFILE:PS51032,SMART:SM00380,SUPERFAMILY:SSF54171,SwissProt:O80542,SwissProt:Q9C9I8,SwissProt:Q9SNE1,TAIR:AT1G22810.1,TAIR:AT1G71520.1,TAIR:AT3G50260.1,TrEMBL:A9PL99,TrEMBL:A9PLA0,TrEMBL:B9SPX2;Derives_from=GSCOCT00034294001;Name=Cc10_g09120;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,CC_EC_number:missing_EC_number,PRODUCT:Ethylene-responsive transcription factor ERF020,CC_functional_completeness:complete,CC_gene:ERF020,CC_gene:ERF019,CC_gene:ERF011;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034294001~ Ethylene-responsive transcription factor ERF020~ ERF020~ complete;original_location=complement(join(238518..238848%2C238342..238424));owner=coffea | |
| 43519 chr10 manual_curation exon 8822778 8822860 . + . Parent=GSCOCT00034294001 | |
| 43520 chr10 manual_curation exon 8822354 8822684 . + . Parent=GSCOCT00034294001 | |
| 43521 chr10 manual_curation CDS 8822778 8822860 . + 1 Parent=GSCOCT00034294001 | |
| 43522 chr10 manual_curation CDS 8822354 8822684 . + 0 Parent=GSCOCT00034294001 | |
| 43523 chr10 manual_curation gene 8823671 8828071 . - . ID=GSCOCG00034292001;Name=Cc10_g09130 | |
| 43524 chr10 manual_curation mRNA 8823671 8828071 . - . ID=GSCOCT00034292001;Parent=GSCOCG00034292001;Name=Cc10_g09130 | |
| 43525 chr10 manual_curation polypeptide 8823823 8827900 . - . ID=GSCOCP00034292001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR002198,InterPro:IPR002347,InterPro:IPR016040,InterPro:IPR020904,PANTHER:PTHR19410,PFAM:PF00106,PRINTS:PR00080,PRINTS:PR00081,PROSITE:PS00061,SwissProt:A4IGM4,SwissProt:Q6P7J1,SwissProt:Q6PUF4,TAIR:AT4G10020.1,TAIR:AT5G50600.1,TAIR:AT5G50700.1,TrEMBL:D7TLI2,TrEMBL:Q2TM26,TrEMBL:Q8LKV5;Derives_from=GSCOCT00034292001;Name=Cc10_g09130;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,GO:0016491,GO:0055114,CC_EC_number:1.1.1.146,PRODUCT:Putative Hydroxysteroid 11-beta-dehydrogenase 1-like protein,CC_functional_completeness:modules,CC_gene:hsd11b1l,CC_gene:hsd11b1l-a,CC_gene:HSD11B1L;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034292001~ Putative Hydroxysteroid 11-beta-dehydrogenase 1-like protein~ hsd11b1l~ modules;original_location=join(233302..233484%2C235247..235439%2C235996..236081%2C236439..236570%2C236740..236904%2C237068..237379);owner=coffea | |
| 43526 chr10 manual_curation exon 8827718 8828071 . - . Parent=GSCOCT00034292001 | |
| 43527 chr10 manual_curation exon 8825763 8825955 . - . Parent=GSCOCT00034292001 | |
| 43528 chr10 manual_curation exon 8825121 8825206 . - . Parent=GSCOCT00034292001 | |
| 43529 chr10 manual_curation exon 8824632 8824763 . - . Parent=GSCOCT00034292001 | |
| 43530 chr10 manual_curation exon 8824298 8824462 . - . Parent=GSCOCT00034292001 | |
| 43531 chr10 manual_curation exon 8823671 8824134 . - . Parent=GSCOCT00034292001 | |
| 43532 chr10 manual_curation CDS 8827718 8827900 . - 0 Parent=GSCOCT00034292001 | |
| 43533 chr10 manual_curation CDS 8825763 8825955 . - 0 Parent=GSCOCT00034292001 | |
| 43534 chr10 manual_curation CDS 8825121 8825206 . - 1 Parent=GSCOCT00034292001 | |
| 43535 chr10 manual_curation CDS 8824632 8824763 . - 0 Parent=GSCOCT00034292001 | |
| 43536 chr10 manual_curation CDS 8824298 8824462 . - 0 Parent=GSCOCT00034292001 | |
| 43537 chr10 manual_curation CDS 8823823 8824134 . - 0 Parent=GSCOCT00034292001 | |
| 43538 chr10 manual_curation gene 8833578 8838614 . + . ID=GSCOCG00034291001;Name=Cc10_g09140 | |
| 43539 chr10 manual_curation mRNA 8833578 8838614 . + . ID=GSCOCT00034291001;Parent=GSCOCG00034291001;Name=Cc10_g09140 | |
| 43540 chr10 manual_curation polypeptide 8833578 8838614 . + . ID=GSCOCP00034291001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q5JK68,SwissProt:Q6I5Y0,SwissProt:Q9ZVM9,TAIR:AT1G33770.1,TAIR:AT1G53050.1,TAIR:AT1G71530.1,TrEMBL:D7TGR2,TrEMBL:F6HN48,TrEMBL:Q9T0F9;Derives_from=GSCOCT00034291001;Name=Cc10_g09140;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.23,PRODUCT:Protein kinase superfamily protein,CC_functional_completeness:complete,CC_gene:At1g54610,CC_gene:CDKC-2,CC_gene:CDKC-1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034291001~ Protein kinase superfamily protein~ At1g54610~ complete;original_location=complement(join(227157..227624%2C226242..226526%2C225624..225941%2C224755..224982%2C224378..224478%2C223670..223772%2C223247..223579%2C222588..222788));owner=coffea | |
| 43541 chr10 manual_curation exon 8838414 8838614 . + . Parent=GSCOCT00034291001 | |
| 43542 chr10 manual_curation exon 8837623 8837955 . + . Parent=GSCOCT00034291001 | |
| 43543 chr10 manual_curation exon 8837430 8837532 . + . Parent=GSCOCT00034291001 | |
| 43544 chr10 manual_curation exon 8836724 8836824 . + . Parent=GSCOCT00034291001 | |
| 43545 chr10 manual_curation exon 8836220 8836447 . + . Parent=GSCOCT00034291001 | |
| 43546 chr10 manual_curation exon 8835261 8835578 . + . Parent=GSCOCT00034291001 | |
| 43547 chr10 manual_curation exon 8834676 8834960 . + . Parent=GSCOCT00034291001 | |
| 43548 chr10 manual_curation exon 8833578 8834045 . + . Parent=GSCOCT00034291001 | |
| 43549 chr10 manual_curation CDS 8838414 8838614 . + 0 Parent=GSCOCT00034291001 | |
| 43550 chr10 manual_curation CDS 8837623 8837955 . + 0 Parent=GSCOCT00034291001 | |
| 43551 chr10 manual_curation CDS 8837430 8837532 . + 2 Parent=GSCOCT00034291001 | |
| 43552 chr10 manual_curation CDS 8836724 8836824 . + 0 Parent=GSCOCT00034291001 | |
| 43553 chr10 manual_curation CDS 8836220 8836447 . + 0 Parent=GSCOCT00034291001 | |
| 43554 chr10 manual_curation CDS 8835261 8835578 . + 0 Parent=GSCOCT00034291001 | |
| 43555 chr10 manual_curation CDS 8834676 8834960 . + 0 Parent=GSCOCT00034291001 | |
| 43556 chr10 manual_curation CDS 8833578 8834045 . + 0 Parent=GSCOCT00034291001 | |
| 43557 chr10 manual_curation gene 8839729 8845715 . - . ID=GSCOCG00034289001;Name=Cc10_g09150 | |
| 43558 chr10 manual_curation mRNA 8839729 8845715 . - . ID=GSCOCT00034289001;Parent=GSCOCG00034289001;Name=Cc10_g09150 | |
| 43559 chr10 manual_curation polypeptide 8839729 8845511 . - . ID=GSCOCP00034289001;Dbxref=InterPro:IPR003774,PFAM:PF02622,SwissProt:A1BEV6,SwissProt:Q3AQ69,SwissProt:Q3B561,TAIR:AT1G33780.1,TAIR:AT3G19780.1,TAIR:AT3G29240.1,TrEMBL:A5ARB7,TrEMBL:B9IQA1,TrEMBL:B9MWI7;Derives_from=GSCOCT00034289001;Name=Cc10_g09150;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative UPF0301 protein Cag_1601,CC_functional_completeness:modules,CC_gene:Cag_1601,CC_gene:Plut_0637,CC_gene:Cpha266_0885;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034289001~ Putative UPF0301 protein Cag_1601~ Cag_1601~ modules;original_location=join(215691..215961%2C219273..219424%2C220796..221473);owner=coffea | |
| 43560 chr10 manual_curation exon 8845241 8845715 . - . Parent=GSCOCT00034289001 | |
| 43561 chr10 manual_curation exon 8841778 8841929 . - . Parent=GSCOCT00034289001 | |
| 43562 chr10 manual_curation exon 8839729 8840406 . - . Parent=GSCOCT00034289001 | |
| 43563 chr10 manual_curation CDS 8845241 8845511 . - 0 Parent=GSCOCT00034289001 | |
| 43564 chr10 manual_curation CDS 8841778 8841929 . - 1 Parent=GSCOCT00034289001 | |
| 43565 chr10 manual_curation CDS 8839729 8840406 . - 0 Parent=GSCOCT00034289001 | |
| 43566 chr10 manual_curation gene 8853139 8856166 . - . ID=GSCOCG00034286001;Name=Cc10_g09160 | |
| 43567 chr10 manual_curation mRNA 8853139 8856166 . - . ID=GSCOCT00034286001;Parent=GSCOCG00034286001;Name=Cc10_g09160 | |
| 43568 chr10 manual_curation polypeptide 8853231 8855930 . - . ID=GSCOCP00034286001;Derives_from=GSCOCT00034286001;Name=Cc10_g09160;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034286001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(205272..205399%2C205840..205907%2C207958..207971);owner=coffea | |
| 43569 chr10 manual_curation exon 8855803 8856166 . - . Parent=GSCOCT00034286001 | |
| 43570 chr10 manual_curation exon 8855295 8855362 . - . Parent=GSCOCT00034286001 | |
| 43571 chr10 manual_curation exon 8853139 8853244 . - . Parent=GSCOCT00034286001 | |
| 43572 chr10 manual_curation CDS 8855803 8855930 . - 0 Parent=GSCOCT00034286001 | |
| 43573 chr10 manual_curation CDS 8855295 8855362 . - 2 Parent=GSCOCT00034286001 | |
| 43574 chr10 manual_curation CDS 8853231 8853244 . - 1 Parent=GSCOCT00034286001 | |
| 43575 chr10 manual_curation gene 8950083 8952724 . + . ID=GSCOCG00034285001;Name=Cc10_g09170 | |
| 43576 chr10 manual_curation mRNA 8950083 8952724 . + . ID=GSCOCT00034285001;Parent=GSCOCG00034285001;Name=Cc10_g09170 | |
| 43577 chr10 manual_curation polypeptide 8950207 8952451 . + . ID=GSCOCP00034285001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:O49394,SwissProt:O49858,SwissProt:Q9SZ46,TAIR:AT3G25180.1,TAIR:AT4G31940.1,TAIR:AT4G31970.1,TrEMBL:A5BQG5,TrEMBL:F6HDC2,TrEMBL:F6HK58;Derives_from=GSCOCT00034285001;Name=Cc10_g09170;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.21,PRODUCT:Putative Cytochrome P450 82C4,CC_functional_completeness:complete,CC_gene:CYP82C4,CC_gene:CYP82C2,CC_gene:CYP82A3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034285001~ Putative Cytochrome P450 82C4~ CYP82C4~ complete;original_location=complement(join(110033..110995%2C108751..109374));owner=coffea | |
| 43578 chr10 manual_curation exon 8951828 8952724 . + . Parent=GSCOCT00034285001 | |
| 43579 chr10 manual_curation exon 8950083 8951169 . + . Parent=GSCOCT00034285001 | |
| 43580 chr10 manual_curation CDS 8951828 8952451 . + 0 Parent=GSCOCT00034285001 | |
| 43581 chr10 manual_curation CDS 8950207 8951169 . + 0 Parent=GSCOCT00034285001 | |
| 43582 chr10 manual_curation gene 8956415 8958359 . - . ID=GSCOCG00034284001;Name=Cc10_g09180 | |
| 43583 chr10 manual_curation mRNA 8956415 8958359 . - . ID=GSCOCT00034284001;Parent=GSCOCG00034284001;Name=Cc10_g09180 | |
| 43584 chr10 manual_curation polypeptide 8956415 8958359 . - . ID=GSCOCP00034284001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,SUPERFAMILY:SSF48264,SwissProt:O04773,SwissProt:Q9SBQ9,SwissProt:Q9SD85,TAIR:AT2G45550.1,TAIR:AT2G45560.1,TAIR:AT5G07990.1,TrEMBL:A1XEL8,TrEMBL:F6HGT0,TrEMBL:Q7M1E6;Derives_from=GSCOCT00034284001;Name=Cc10_g09180;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.21,PRODUCT:Putative Flavonoid 3'-monooxygenase,CC_functional_completeness:complete,CC_gene:CYP75B1,CC_gene:CYP75A6,CC_gene:CYP75B2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034284001~ Putative Flavonoid 3'-monooxygenase~ CYP75B1~ complete;original_location=join(102843..103214%2C103349..103744%2C104161..104787);owner=coffea | |
| 43585 chr10 manual_curation exon 8957988 8958359 . - . Parent=GSCOCT00034284001 | |
| 43586 chr10 manual_curation exon 8957458 8957853 . - . Parent=GSCOCT00034284001 | |
| 43587 chr10 manual_curation exon 8956415 8957041 . - . Parent=GSCOCT00034284001 | |
| 43588 chr10 manual_curation CDS 8957988 8958359 . - 0 Parent=GSCOCT00034284001 | |
| 43589 chr10 manual_curation CDS 8957458 8957853 . - 0 Parent=GSCOCT00034284001 | |
| 43590 chr10 manual_curation CDS 8956415 8957041 . - 0 Parent=GSCOCT00034284001 | |
| 43591 chr10 manual_curation gene 8976781 8986540 . + . ID=GSCOCG00034281001;Name=Cc10_g09190 | |
| 43592 chr10 manual_curation mRNA 8976781 8986540 . + . ID=GSCOCT00034281001;Parent=GSCOCG00034281001;Name=Cc10_g09190 | |
| 43593 chr10 manual_curation polypeptide 8976903 8986155 . + . ID=GSCOCP00034281001;Dbxref=GENE3D:G3DSA:3.40.30.10,InterPro:IPR002109,InterPro:IPR004045,InterPro:IPR012335,InterPro:IPR012336,PFAM:PF00462,PROFILE:PS50404,SUPERFAMILY:SSF52833,TAIR:AT4G10000.1,TAIR:AT5G03880.1,TrEMBL:B9MWH4,TrEMBL:D7TLI7,TrEMBL:G7J060;Derives_from=GSCOCT00034281001;Name=Cc10_g09190;Ontology_term=CC_evidence_code:ISS,GO:0009055,GO:0015035,GO:0045454,CC_EC_number:missing_EC_number,PRODUCT:Thioredoxin family protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034281001~ Thioredoxin family protein~ unknown_gene~ modules;original_location=complement(join(83955..84299%2C82543..82581%2C81256..81376%2C80572..80633%2C79968..80035%2C79295..79344%2C76781..76850%2C76128..76251%2C75489..75605%2C75047..75145));owner=coffea | |
| 43594 chr10 manual_curation exon 8986057 8986540 . + . Parent=GSCOCT00034281001 | |
| 43595 chr10 manual_curation exon 8985597 8985713 . + . Parent=GSCOCT00034281001 | |
| 43596 chr10 manual_curation exon 8984951 8985074 . + . Parent=GSCOCT00034281001 | |
| 43597 chr10 manual_curation exon 8984352 8984421 . + . Parent=GSCOCT00034281001 | |
| 43598 chr10 manual_curation exon 8981858 8981907 . + . Parent=GSCOCT00034281001 | |
| 43599 chr10 manual_curation exon 8981167 8981234 . + . Parent=GSCOCT00034281001 | |
| 43600 chr10 manual_curation exon 8980569 8980630 . + . Parent=GSCOCT00034281001 | |
| 43601 chr10 manual_curation exon 8979826 8979946 . + . Parent=GSCOCT00034281001 | |
| 43602 chr10 manual_curation exon 8978621 8978659 . + . Parent=GSCOCT00034281001 | |
| 43603 chr10 manual_curation exon 8976781 8977247 . + . Parent=GSCOCT00034281001 | |
| 43604 chr10 manual_curation CDS 8986057 8986155 . + 0 Parent=GSCOCT00034281001 | |
| 43605 chr10 manual_curation CDS 8985597 8985713 . + 0 Parent=GSCOCT00034281001 | |
| 43606 chr10 manual_curation CDS 8984951 8985074 . + 2 Parent=GSCOCT00034281001 | |
| 43607 chr10 manual_curation CDS 8984352 8984421 . + 1 Parent=GSCOCT00034281001 | |
| 43608 chr10 manual_curation CDS 8981858 8981907 . + 2 Parent=GSCOCT00034281001 | |
| 43609 chr10 manual_curation CDS 8981167 8981234 . + 0 Parent=GSCOCT00034281001 | |
| 43610 chr10 manual_curation CDS 8980569 8980630 . + 1 Parent=GSCOCT00034281001 | |
| 43611 chr10 manual_curation CDS 8979826 8979946 . + 0 Parent=GSCOCT00034281001 | |
| 43612 chr10 manual_curation CDS 8978621 8978659 . + 0 Parent=GSCOCT00034281001 | |
| 43613 chr10 manual_curation CDS 8976903 8977247 . + 0 Parent=GSCOCT00034281001 | |
| 43614 chr10 manual_curation gene 9011216 9025977 . + . ID=GSCOCG00034278001;Name=Cc10_g09200 | |
| 43615 chr10 manual_curation mRNA 9011216 9025977 . + . ID=GSCOCT00034278001;Parent=GSCOCG00034278001;Name=Cc10_g09200 | |
| 43616 chr10 manual_curation polypeptide 9011516 9025977 . + . ID=GSCOCP00034278001;Dbxref=GENE3D:G3DSA:2.30.29.30,InterPro:IPR000375,InterPro:IPR001401,InterPro:IPR001849,InterPro:IPR003130,InterPro:IPR011993,InterPro:IPR019762,InterPro:IPR020850,InterPro:IPR022812,PFAM:PF00169,PFAM:PF00350,PFAM:PF01031,PFAM:PF02212,PRINTS:PR00195,PROFILE:PS50003,PROFILE:PS51388,PROSITE:PS00410,SMART:SM00053,SMART:SM00233,SwissProt:Q9FNX5,SwissProt:Q9LQ55,SwissProt:Q9SE83,TAIR:AT1G10290.1,TAIR:AT1G59610.1,TAIR:AT3G60190.1,TrEMBL:D7SN01,TrEMBL:D7TGM4,TrEMBL:Q5DMX3;Derives_from=GSCOCT00034278001;Name=Cc10_g09200;Ontology_term=CC_evidence_code:ISS,GO:0003924,GO:0005525,CC_EC_number:missing_EC_number,PRODUCT:Dynamin-2B,CC_functional_completeness:complete,CC_gene:DRP2B,CC_gene:DRP2A,CC_gene:DRP1E;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034278001~ Dynamin-2B~ DRP2B~ complete;original_location=complement(join(49537..49686%2C47408..47458%2C47180..47300%2C46951..47040%2C46619..46680%2C46354..46468%2C45894..46236%2C45370..45517%2C44051..44152%2C43808..43927%2C42807..42890%2C42585..42712%2C41500..41584%2C41220..41358%2C40194..40270%2C38681..38737%2C37610..37760%2C37351..37499%2C36957..37070%2C36796..36863%2C36362..36534%2C35225..35469));owner=coffea | |
| 43617 chr10 manual_curation exon 9025733 9025977 . + . Parent=GSCOCT00034278001 | |
| 43618 chr10 manual_curation exon 9024668 9024840 . + . Parent=GSCOCT00034278001 | |
| 43619 chr10 manual_curation exon 9024339 9024406 . + . Parent=GSCOCT00034278001 | |
| 43620 chr10 manual_curation exon 9024132 9024245 . + . Parent=GSCOCT00034278001 | |
| 43621 chr10 manual_curation exon 9023703 9023851 . + . Parent=GSCOCT00034278001 | |
| 43622 chr10 manual_curation exon 9023442 9023592 . + . Parent=GSCOCT00034278001 | |
| 43623 chr10 manual_curation exon 9022465 9022521 . + . Parent=GSCOCT00034278001 | |
| 43624 chr10 manual_curation exon 9020932 9021008 . + . Parent=GSCOCT00034278001 | |
| 43625 chr10 manual_curation exon 9019844 9019982 . + . Parent=GSCOCT00034278001 | |
| 43626 chr10 manual_curation exon 9019618 9019702 . + . Parent=GSCOCT00034278001 | |
| 43627 chr10 manual_curation exon 9018490 9018617 . + . Parent=GSCOCT00034278001 | |
| 43628 chr10 manual_curation exon 9018312 9018395 . + . Parent=GSCOCT00034278001 | |
| 43629 chr10 manual_curation exon 9017275 9017394 . + . Parent=GSCOCT00034278001 | |
| 43630 chr10 manual_curation exon 9017050 9017151 . + . Parent=GSCOCT00034278001 | |
| 43631 chr10 manual_curation exon 9015685 9015832 . + . Parent=GSCOCT00034278001 | |
| 43632 chr10 manual_curation exon 9014966 9015308 . + . Parent=GSCOCT00034278001 | |
| 43633 chr10 manual_curation exon 9014734 9014848 . + . Parent=GSCOCT00034278001 | |
| 43634 chr10 manual_curation exon 9014522 9014583 . + . Parent=GSCOCT00034278001 | |
| 43635 chr10 manual_curation exon 9014162 9014251 . + . Parent=GSCOCT00034278001 | |
| 43636 chr10 manual_curation exon 9013902 9014022 . + . Parent=GSCOCT00034278001 | |
| 43637 chr10 manual_curation exon 9013744 9013794 . + . Parent=GSCOCT00034278001 | |
| 43638 chr10 manual_curation exon 9011216 9011665 . + . Parent=GSCOCT00034278001 | |
| 43639 chr10 manual_curation CDS 9025733 9025977 . + 1 Parent=GSCOCT00034278001 | |
| 43640 chr10 manual_curation CDS 9024668 9024840 . + 2 Parent=GSCOCT00034278001 | |
| 43641 chr10 manual_curation CDS 9024339 9024406 . + 0 Parent=GSCOCT00034278001 | |
| 43642 chr10 manual_curation CDS 9024132 9024245 . + 0 Parent=GSCOCT00034278001 | |
| 43643 chr10 manual_curation CDS 9023703 9023851 . + 1 Parent=GSCOCT00034278001 | |
| 43644 chr10 manual_curation CDS 9023442 9023592 . + 0 Parent=GSCOCT00034278001 | |
| 43645 chr10 manual_curation CDS 9022465 9022521 . + 0 Parent=GSCOCT00034278001 | |
| 43646 chr10 manual_curation CDS 9020932 9021008 . + 1 Parent=GSCOCT00034278001 | |
| 43647 chr10 manual_curation CDS 9019844 9019982 . + 0 Parent=GSCOCT00034278001 | |
| 43648 chr10 manual_curation CDS 9019618 9019702 . + 2 Parent=GSCOCT00034278001 | |
| 43649 chr10 manual_curation CDS 9018490 9018617 . + 0 Parent=GSCOCT00034278001 | |
| 43650 chr10 manual_curation CDS 9018312 9018395 . + 0 Parent=GSCOCT00034278001 | |
| 43651 chr10 manual_curation CDS 9017275 9017394 . + 0 Parent=GSCOCT00034278001 | |
| 43652 chr10 manual_curation CDS 9017050 9017151 . + 0 Parent=GSCOCT00034278001 | |
| 43653 chr10 manual_curation CDS 9015685 9015832 . + 2 Parent=GSCOCT00034278001 | |
| 43654 chr10 manual_curation CDS 9014966 9015308 . + 1 Parent=GSCOCT00034278001 | |
| 43655 chr10 manual_curation CDS 9014734 9014848 . + 0 Parent=GSCOCT00034278001 | |
| 43656 chr10 manual_curation CDS 9014522 9014583 . + 1 Parent=GSCOCT00034278001 | |
| 43657 chr10 manual_curation CDS 9014162 9014251 . + 1 Parent=GSCOCT00034278001 | |
| 43658 chr10 manual_curation CDS 9013902 9014022 . + 0 Parent=GSCOCT00034278001 | |
| 43659 chr10 manual_curation CDS 9013744 9013794 . + 0 Parent=GSCOCT00034278001 | |
| 43660 chr10 manual_curation CDS 9011516 9011665 . + 0 Parent=GSCOCT00034278001 | |
| 43661 chr10 manual_curation gene 9030007 9030675 . - . ID=GSCOCG00034276001;Name=Cc10_g09210 | |
| 43662 chr10 manual_curation mRNA 9030007 9030675 . - . ID=GSCOCT00034276001;Parent=GSCOCG00034276001;Name=Cc10_g09210 | |
| 43663 chr10 manual_curation polypeptide 9030007 9030675 . - . ID=GSCOCP00034276001;Dbxref=InterPro:IPR007770,PFAM:PF05078,TAIR:AT1G09157.1,TAIR:AT3G02430.1,TAIR:AT5G39650.1,TrEMBL:B9HI74,TrEMBL:B9S8X6,TrEMBL:F6H5U1;Derives_from=GSCOCT00034276001;Name=Cc10_g09210;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF679),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034276001~ Protein of unknown function (DUF679)~ unknown_gene~ complete;original_location=30527..31195;owner=coffea | |
| 43664 chr10 manual_curation exon 9030007 9030675 . - . Parent=GSCOCT00034276001 | |
| 43665 chr10 manual_curation CDS 9030007 9030675 . - 0 Parent=GSCOCT00034276001 | |
| 43666 chr10 manual_curation gene 9036688 9037515 . + . ID=GSCOCG00034274001;Name=Cc10_g09220 | |
| 43667 chr10 manual_curation mRNA 9036688 9037515 . + . ID=GSCOCT00034274001;Parent=GSCOCG00034274001;Name=Cc10_g09220 | |
| 43668 chr10 manual_curation polypeptide 9036688 9037515 . + . ID=GSCOCP00034274001;Dbxref=InterPro:IPR006514,InterPro:IPR021148,PFAM:PF04669,TAIR:AT1G09610.1,TAIR:AT1G33800.1,TAIR:AT4G09990.1,TIGRFAMs:TIGR01627,TrEMBL:B9SK84,TrEMBL:D7UDZ3,TrEMBL:G7J059;Derives_from=GSCOCT00034274001;Name=Cc10_g09220;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF579),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034274001~ Protein of unknown function (DUF579)~ unknown_gene~ complete;original_location=complement(23687..24514);owner=coffea | |
| 43669 chr10 manual_curation exon 9036688 9037515 . + . Parent=GSCOCT00034274001 | |
| 43670 chr10 manual_curation CDS 9036688 9037515 . + 0 Parent=GSCOCT00034274001 | |
| 43671 chr10 manual_curation gene 9047085 9048017 . + . ID=GSCOCG00034272001;Name=Cc10_g09230 | |
| 43672 chr10 manual_curation mRNA 9047085 9048017 . + . ID=GSCOCT00034272001;Parent=GSCOCG00034272001;Name=Cc10_g09230 | |
| 43673 chr10 manual_curation polypeptide 9047085 9048017 . + . ID=GSCOCP00034272001;Dbxref=InterPro:IPR006514,InterPro:IPR021148,PFAM:PF04669,TAIR:AT1G09610.1,TAIR:AT1G33800.1,TAIR:AT4G09990.1,TIGRFAMs:TIGR01627,TrEMBL:B9SK84,TrEMBL:D7UDZ3,TrEMBL:G7J059;Derives_from=GSCOCT00034272001;Name=Cc10_g09230;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF579),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034272001~ Protein of unknown function (DUF579)~ unknown_gene~ complete;original_location=complement(13185..14117);owner=coffea | |
| 43674 chr10 manual_curation exon 9047085 9048017 . + . Parent=GSCOCT00034272001 | |
| 43675 chr10 manual_curation CDS 9047085 9048017 . + 0 Parent=GSCOCT00034272001 | |
| 43676 chr10 manual_curation gene 9053407 9059395 . + . ID=GSCOCG00034270001;Name=Cc10_g09240 | |
| 43677 chr10 manual_curation mRNA 9053407 9059395 . + . ID=GSCOCT00034270001;Parent=GSCOCG00034270001;Name=Cc10_g09240 | |
| 43678 chr10 manual_curation polypeptide 9053470 9058721 . + . ID=GSCOCP00034270001;Dbxref=TAIR:AT1G33810.1,TrEMBL:A9JPD0,TrEMBL:A9PCL6,TrEMBL:D7U904;Derives_from=GSCOCT00034270001;Name=Cc10_g09240;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034270001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast thylakoid membrane%2C chloroplast%2C chloroplast envelope%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B Has 39 Blast hits to 39 proteins in 18 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 39%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(7502..7732%2C3607..3721%2C2481..2554));owner=coffea | |
| 43679 chr10 manual_curation exon 9058648 9059395 . + . Parent=GSCOCT00034270001 | |
| 43680 chr10 manual_curation exon 9057481 9057595 . + . Parent=GSCOCT00034270001 | |
| 43681 chr10 manual_curation exon 9053407 9053700 . + . Parent=GSCOCT00034270001 | |
| 43682 chr10 manual_curation CDS 9058648 9058721 . + 1 Parent=GSCOCT00034270001 | |
| 43683 chr10 manual_curation CDS 9057481 9057595 . + 0 Parent=GSCOCT00034270001 | |
| 43684 chr10 manual_curation CDS 9053470 9053700 . + 0 Parent=GSCOCT00034270001 | |
| 43685 chr10 manual_curation gene 9101773 9104186 . + . ID=GSCOCG00004645001;Name=Cc10_g09250 | |
| 43686 chr10 manual_curation mRNA 9101773 9104186 . + . ID=GSCOCT00004645001;Parent=GSCOCG00004645001;Name=Cc10_g09250 | |
| 43687 chr10 manual_curation polypeptide 9101773 9104186 . + . ID=GSCOCP00004645001;Dbxref=GENE3D:G3DSA:1.10.268.10,InterPro:IPR002205,InterPro:IPR013757,InterPro:IPR013760,PFAM:PF00521,SUPERFAMILY:SSF56719,SwissProt:Q5YLB5,SwissProt:Q7XZF7,SwissProt:Q9CAF6,TAIR:AT3G10690.1,TrEMBL:B9HVG1,TrEMBL:F6HIV0,TrEMBL:G7I9Z9;Derives_from=GSCOCT00004645001;Name=Cc10_g09250;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003918,GO:0005524,GO:0005694,GO:0006259,GO:0006265,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:GYRA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004645001~ Hypothetical protein~ GYRA~ missing_functional_completeness;original_location=join(2..114%2C1298..1346%2C1862..1948%2C2308..2415);owner=coffea | |
| 43688 chr10 manual_curation exon 9101773 9101885 . + . Parent=GSCOCT00004645001 | |
| 43689 chr10 manual_curation exon 9103069 9103117 . + . Parent=GSCOCT00004645001 | |
| 43690 chr10 manual_curation exon 9103633 9103719 . + . Parent=GSCOCT00004645001 | |
| 43691 chr10 manual_curation exon 9104079 9104186 . + . Parent=GSCOCT00004645001 | |
| 43692 chr10 manual_curation CDS 9101773 9101885 . + 0 Parent=GSCOCT00004645001 | |
| 43693 chr10 manual_curation CDS 9103069 9103117 . + 2 Parent=GSCOCT00004645001 | |
| 43694 chr10 manual_curation CDS 9103633 9103719 . + 0 Parent=GSCOCT00004645001 | |
| 43695 chr10 manual_curation CDS 9104079 9104186 . + 0 Parent=GSCOCT00004645001 | |
| 43696 chr10 manual_curation gene 9127901 9135732 . + . ID=GSCOCG00004650001;Name=Cc10_g09260 | |
| 43697 chr10 manual_curation mRNA 9127901 9135732 . + . ID=GSCOCT00004650001;Parent=GSCOCG00004650001;Name=Cc10_g09260 | |
| 43698 chr10 manual_curation polypeptide 9127901 9135732 . + . ID=GSCOCP00004650001;Dbxref=InterPro:IPR006691,PFAM:PF03989,SwissProt:Q5YLB5,SwissProt:Q7XZF7,SwissProt:Q9CAF6,TAIR:AT3G10690.1,TrEMBL:B9HVG1,TrEMBL:B9SK05,TrEMBL:F6HIV0;Derives_from=GSCOCT00004650001;Name=Cc10_g09260;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003916,GO:0005524,GO:0005694,GO:0006265,CC_EC_number:missing_EC_number,PRODUCT:DNA gyrase subunit A%2C chloroplastic/mitochondrial,CC_functional_completeness:fragment,CC_gene:GYRA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004650001~ DNA gyrase subunit A%2C chloroplastic/mitochondrial~ GYRA~ fragment;original_location=join(26130..26201%2C26593..26720%2C26810..26959%2C27181..27245%2C27290..27488%2C33835..33853%2C33938..33961);owner=coffea | |
| 43699 chr10 manual_curation exon 9127901 9127972 . + . Parent=GSCOCT00004650001 | |
| 43700 chr10 manual_curation exon 9128364 9128491 . + . Parent=GSCOCT00004650001 | |
| 43701 chr10 manual_curation exon 9128581 9128730 . + . Parent=GSCOCT00004650001 | |
| 43702 chr10 manual_curation exon 9128952 9129016 . + . Parent=GSCOCT00004650001 | |
| 43703 chr10 manual_curation exon 9129061 9129259 . + . Parent=GSCOCT00004650001 | |
| 43704 chr10 manual_curation exon 9135606 9135624 . + . Parent=GSCOCT00004650001 | |
| 43705 chr10 manual_curation exon 9135709 9135732 . + . Parent=GSCOCT00004650001 | |
| 43706 chr10 manual_curation CDS 9127901 9127972 . + 0 Parent=GSCOCT00004650001 | |
| 43707 chr10 manual_curation CDS 9128364 9128491 . + 0 Parent=GSCOCT00004650001 | |
| 43708 chr10 manual_curation CDS 9128581 9128730 . + 2 Parent=GSCOCT00004650001 | |
| 43709 chr10 manual_curation CDS 9128952 9129016 . + 2 Parent=GSCOCT00004650001 | |
| 43710 chr10 manual_curation CDS 9129061 9129259 . + 1 Parent=GSCOCT00004650001 | |
| 43711 chr10 manual_curation CDS 9135606 9135624 . + 2 Parent=GSCOCT00004650001 | |
| 43712 chr10 manual_curation CDS 9135709 9135732 . + 0 Parent=GSCOCT00004650001 | |
| 43713 chr10 manual_curation gene 9306008 9310325 . - . ID=GSCOCG00004653001;Name=Cc10_g09270 | |
| 43714 chr10 manual_curation mRNA 9306008 9310325 . - . ID=GSCOCT00004653001;Parent=GSCOCG00004653001;Name=Cc10_g09270 | |
| 43715 chr10 manual_curation polypeptide 9306008 9310325 . - . ID=GSCOCP00004653001;Dbxref=InterPro:IPR000152,InterPro:IPR000719,InterPro:IPR001881,InterPro:IPR002290,InterPro:IPR006210,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR013091,InterPro:IPR017442,InterPro:IPR018097,InterPro:IPR020635,PFAM:PF00069,PFAM:PF07645,PROFILE:PS50011,PROSITE:PS00010,PROSITE:PS00108,PROSITE:PS01187,SMART:SM00179,SMART:SM00181,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q9C9L5,SwissProt:Q9LMN8,SwissProt:Q9LMP1,TAIR:AT1G21240.1,TAIR:AT1G21270.1,TAIR:AT1G69730.1,TrEMBL:B9RE26,TrEMBL:F6H0F7,TrEMBL:F6H0G0;Derives_from=GSCOCT00004653001;Name=Cc10_g09270;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005509,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Wall-associated receptor kinase 2,CC_functional_completeness:fragment,CC_gene:WAK2,CC_gene:WAKL9,CC_gene:WAK3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004653001~ Putative Wall-associated receptor kinase 2~ WAK2~ fragment;original_location=complement(join(208137..208554%2C207414..207590%2C204237..205441));owner=coffea | |
| 43716 chr10 manual_curation exon 9306008 9307212 . - . Parent=GSCOCT00004653001 | |
| 43717 chr10 manual_curation exon 9309185 9309361 . - . Parent=GSCOCT00004653001 | |
| 43718 chr10 manual_curation exon 9309908 9310325 . - . Parent=GSCOCT00004653001 | |
| 43719 chr10 manual_curation CDS 9306008 9307212 . - 1 Parent=GSCOCT00004653001 | |
| 43720 chr10 manual_curation CDS 9309185 9309361 . - 1 Parent=GSCOCT00004653001 | |
| 43721 chr10 manual_curation CDS 9309908 9310325 . - 0 Parent=GSCOCT00004653001 | |
| 43722 chr10 manual_curation gene 9359631 9362843 . - . ID=GSCOCG00003945001;Name=Cc10_g09280 | |
| 43723 chr10 manual_curation mRNA 9359631 9362843 . - . ID=GSCOCT00003945001;Parent=GSCOCG00003945001;Name=Cc10_g09280 | |
| 43724 chr10 manual_curation polypeptide 9359631 9362843 . - . ID=GSCOCP00003945001;Dbxref=InterPro:IPR005989,InterPro:IPR016196,SUPERFAMILY:SSF103473,SwissProt:Q03411,SwissProt:Q39231,SwissProt:Q9C8X2,TAIR:AT1G22710.1,TAIR:AT1G71880.1,TAIR:AT1G71890.1,TIGRFAMs:TIGR01301,TrEMBL:B9SLI0,TrEMBL:Q41152,TrEMBL:Q5YGP9;Derives_from=GSCOCT00003945001;Name=Cc10_g09280;Ontology_term=CC_evidence_code:ISS,GO:0005887,GO:0008515,GO:0015770,CC_EC_number:missing_EC_number,PRODUCT:Sucrose transport protein SUC2,CC_functional_completeness:complete,CC_gene:SUC2,CC_gene:SUC5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00003945001~ Sucrose transport protein SUC2~ SUC2~ complete;original_location=complement(join(51056..52303%2C50673..50736%2C50496..50539%2C49091..49237));owner=coffea | |
| 43725 chr10 manual_curation exon 9359631 9359777 . - . Parent=GSCOCT00003945001 | |
| 43726 chr10 manual_curation exon 9361036 9361079 . - . Parent=GSCOCT00003945001 | |
| 43727 chr10 manual_curation exon 9361213 9361276 . - . Parent=GSCOCT00003945001 | |
| 43728 chr10 manual_curation exon 9361596 9362843 . - . Parent=GSCOCT00003945001 | |
| 43729 chr10 manual_curation CDS 9359631 9359777 . - 0 Parent=GSCOCT00003945001 | |
| 43730 chr10 manual_curation CDS 9361036 9361079 . - 1 Parent=GSCOCT00003945001 | |
| 43731 chr10 manual_curation CDS 9361213 9361276 . - 0 Parent=GSCOCT00003945001 | |
| 43732 chr10 manual_curation CDS 9361596 9362843 . - 0 Parent=GSCOCT00003945001 | |
| 43733 chr10 manual_curation gene 9366491 9372903 . - . ID=GSCOCG00031565001;Name=Cc10_g09290 | |
| 43734 chr10 manual_curation mRNA 9366491 9372903 . - . ID=GSCOCT00031565001;Parent=GSCOCG00031565001;Name=Cc10_g09290 | |
| 43735 chr10 manual_curation polypeptide 9366613 9372903 . - . ID=GSCOCP00031565001;Dbxref=GENE3D:G3DSA:3.20.20.70,InterPro:IPR001155,InterPro:IPR013785,PFAM:PF00724,SwissProt:B9FSC8,SwissProt:Q8GYB8,SwissProt:Q8LAH7,TAIR:AT1G09400.1,TAIR:AT1G76680.2,TAIR:AT1G76690.1,TrEMBL:A5AVR2,TrEMBL:F6I447,TrEMBL:Q76DL0;Derives_from=GSCOCT00031565001;Name=Cc10_g09290;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,GO:0010181,GO:0016491,CC_EC_number:1.3.1.42,PRODUCT:Putative 12-oxophytodienoate reductase 11,CC_functional_completeness:complete,CC_gene:OPR11,CC_gene:OPR2,CC_gene:OPR1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031565001~ Putative 12-oxophytodienoate reductase 11~ OPR11~ complete;original_location=join(2285902..2286005%2C2287257..2287397%2C2287523..2287653%2C2287990..2288166%2C2288733..2289068%2C2289207..2289321%2C2291078..2291131%2C2291530..2291660%2C2291990..2292192);owner=coffea | |
| 43736 chr10 manual_curation exon 9372800 9372903 . - . Parent=GSCOCT00031565001 | |
| 43737 chr10 manual_curation exon 9371408 9371548 . - . Parent=GSCOCT00031565001 | |
| 43738 chr10 manual_curation exon 9371152 9371282 . - . Parent=GSCOCT00031565001 | |
| 43739 chr10 manual_curation exon 9370639 9370815 . - . Parent=GSCOCT00031565001 | |
| 43740 chr10 manual_curation exon 9369737 9370072 . - . Parent=GSCOCT00031565001 | |
| 43741 chr10 manual_curation exon 9369484 9369598 . - . Parent=GSCOCT00031565001 | |
| 43742 chr10 manual_curation exon 9367674 9367727 . - . Parent=GSCOCT00031565001 | |
| 43743 chr10 manual_curation exon 9367145 9367275 . - . Parent=GSCOCT00031565001 | |
| 43744 chr10 manual_curation exon 9366491 9366815 . - . Parent=GSCOCT00031565001 | |
| 43745 chr10 manual_curation CDS 9372800 9372903 . - 0 Parent=GSCOCT00031565001 | |
| 43746 chr10 manual_curation CDS 9371408 9371548 . - 2 Parent=GSCOCT00031565001 | |
| 43747 chr10 manual_curation CDS 9371152 9371282 . - 2 Parent=GSCOCT00031565001 | |
| 43748 chr10 manual_curation CDS 9370639 9370815 . - 1 Parent=GSCOCT00031565001 | |
| 43749 chr10 manual_curation CDS 9369737 9370072 . - 1 Parent=GSCOCT00031565001 | |
| 43750 chr10 manual_curation CDS 9369484 9369598 . - 1 Parent=GSCOCT00031565001 | |
| 43751 chr10 manual_curation CDS 9367674 9367727 . - 2 Parent=GSCOCT00031565001 | |
| 43752 chr10 manual_curation CDS 9367145 9367275 . - 2 Parent=GSCOCT00031565001 | |
| 43753 chr10 manual_curation CDS 9366613 9366815 . - 1 Parent=GSCOCT00031565001 | |
| 43754 chr10 manual_curation gene 9396433 9396866 . - . ID=GSCOCG00031563001;Name=Cc10_g09300 | |
| 43755 chr10 manual_curation mRNA 9396433 9396866 . - . ID=GSCOCT00031563001;Parent=GSCOCG00031563001;Name=Cc10_g09300 | |
| 43756 chr10 manual_curation polypeptide 9396433 9396866 . - . ID=GSCOCP00031563001;Dbxref=GENE3D:G3DSA:3.20.20.70,InterPro:IPR001155,InterPro:IPR013785,PFAM:PF00724,SwissProt:B9FFD2,SwissProt:B9FSC8,SwissProt:Q9XG54,TAIR:AT1G09400.1,TAIR:AT1G76680.2,TAIR:AT1G76690.1,TrEMBL:A9PGW1,TrEMBL:B9MWG5,TrEMBL:B9MWG6;Derives_from=GSCOCT00031563001;Name=Cc10_g09300;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,GO:0010181,GO:0016491,CC_EC_number:1.3.1.42,PRODUCT:Predicted protein,CC_functional_completeness:modules,CC_gene:OPR11,CC_gene:OPR1,CC_gene:OPR12;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031563001~ Predicted protein~ OPR11~ modules;original_location=join(2261939..2262050%2C2262176..2262372);owner=coffea | |
| 43757 chr10 manual_curation exon 9396755 9396866 . - . Parent=GSCOCT00031563001 | |
| 43758 chr10 manual_curation exon 9396433 9396629 . - . Parent=GSCOCT00031563001 | |
| 43759 chr10 manual_curation CDS 9396755 9396866 . - 0 Parent=GSCOCT00031563001 | |
| 43760 chr10 manual_curation CDS 9396433 9396629 . - 1 Parent=GSCOCT00031563001 | |
| 43761 chr10 manual_curation gene 9401184 9404598 . - . ID=GSCOCG00031562001;Name=Cc10_g09310 | |
| 43762 chr10 manual_curation mRNA 9401184 9404598 . - . ID=GSCOCT00031562001;Parent=GSCOCG00031562001;Name=Cc10_g09310 | |
| 43763 chr10 manual_curation polypeptide 9401375 9404427 . - . ID=GSCOCP00031562001;Dbxref=GENE3D:G3DSA:3.20.20.70,InterPro:IPR001155,InterPro:IPR013785,PFAM:PF00724,SwissProt:B9FSC8,SwissProt:Q8GYB8,SwissProt:Q8LAH7,TAIR:AT1G09400.1,TAIR:AT1G76680.2,TAIR:AT1G76690.1,TrEMBL:A5AVR2,TrEMBL:F6I447,TrEMBL:G7K3S4;Derives_from=GSCOCT00031562001;Name=Cc10_g09310;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,GO:0010181,GO:0016491,CC_EC_number:1.3.1.42,PRODUCT:Putative 12-oxophytodienoate reductase 11,CC_functional_completeness:complete,CC_gene:OPR11,CC_gene:OPR1,CC_gene:OPR2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031562001~ Putative 12-oxophytodienoate reductase 11~ OPR11~ complete;original_location=join(2254378..2254481%2C2255443..2255583%2C2255707..2255837%2C2256162..2256338%2C2256895..2257173%2C2257309..2257430);owner=coffea | |
| 43764 chr10 manual_curation exon 9404324 9404598 . - . Parent=GSCOCT00031562001 | |
| 43765 chr10 manual_curation exon 9403222 9403362 . - . Parent=GSCOCT00031562001 | |
| 43766 chr10 manual_curation exon 9402968 9403098 . - . Parent=GSCOCT00031562001 | |
| 43767 chr10 manual_curation exon 9402467 9402643 . - . Parent=GSCOCT00031562001 | |
| 43768 chr10 manual_curation exon 9401632 9401910 . - . Parent=GSCOCT00031562001 | |
| 43769 chr10 manual_curation exon 9401184 9401496 . - . Parent=GSCOCT00031562001 | |
| 43770 chr10 manual_curation CDS 9404324 9404427 . - 0 Parent=GSCOCT00031562001 | |
| 43771 chr10 manual_curation CDS 9403222 9403362 . - 2 Parent=GSCOCT00031562001 | |
| 43772 chr10 manual_curation CDS 9402968 9403098 . - 2 Parent=GSCOCT00031562001 | |
| 43773 chr10 manual_curation CDS 9402467 9402643 . - 1 Parent=GSCOCT00031562001 | |
| 43774 chr10 manual_curation CDS 9401632 9401910 . - 1 Parent=GSCOCT00031562001 | |
| 43775 chr10 manual_curation CDS 9401375 9401496 . - 1 Parent=GSCOCT00031562001 | |
| 43776 chr10 manual_curation gene 9435535 9437877 . - . ID=GSCOCG00031560001;Name=Cc10_g09320 | |
| 43777 chr10 manual_curation mRNA 9435535 9437877 . - . ID=GSCOCT00031560001;Parent=GSCOCG00031560001;Name=Cc10_g09320 | |
| 43778 chr10 manual_curation polypeptide 9435535 9437877 . - . ID=GSCOCP00031560001;Dbxref=GENE3D:G3DSA:3.20.20.70,InterPro:IPR001155,InterPro:IPR013785,PFAM:PF00724,SwissProt:B9FSC8,SwissProt:Q8GYB8,SwissProt:Q9XG54,TAIR:AT1G09400.1,TAIR:AT1G76680.2,TAIR:AT1G76690.1,TrEMBL:F6I447,TrEMBL:F6I449,TrEMBL:O23777;Derives_from=GSCOCT00031560001;Name=Cc10_g09320;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,GO:0010181,GO:0016491,CC_EC_number:1.3.1.42,PRODUCT:12-oxophytodienoate reductase 2,CC_functional_completeness:complete,CC_gene:OPR2,CC_gene:OPR11,CC_gene:OPR1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031560001~ 12-oxophytodienoate reductase 2~ OPR2~ complete;original_location=join(2220928..2221028%2C2221209..2221352%2C2221618..2221742%2C2221964..2222128%2C2222678..2223270);owner=coffea | |
| 43779 chr10 manual_curation exon 9437777 9437877 . - . Parent=GSCOCT00031560001 | |
| 43780 chr10 manual_curation exon 9437453 9437596 . - . Parent=GSCOCT00031560001 | |
| 43781 chr10 manual_curation exon 9437063 9437187 . - . Parent=GSCOCT00031560001 | |
| 43782 chr10 manual_curation exon 9436677 9436841 . - . Parent=GSCOCT00031560001 | |
| 43783 chr10 manual_curation exon 9435535 9436127 . - . Parent=GSCOCT00031560001 | |
| 43784 chr10 manual_curation CDS 9437777 9437877 . - 0 Parent=GSCOCT00031560001 | |
| 43785 chr10 manual_curation CDS 9437453 9437596 . - 2 Parent=GSCOCT00031560001 | |
| 43786 chr10 manual_curation CDS 9437063 9437187 . - 2 Parent=GSCOCT00031560001 | |
| 43787 chr10 manual_curation CDS 9436677 9436841 . - 1 Parent=GSCOCT00031560001 | |
| 43788 chr10 manual_curation CDS 9435535 9436127 . - 1 Parent=GSCOCT00031560001 | |
| 43789 chr10 manual_curation gene 9443598 9445240 . - . ID=GSCOCG00031559001;Name=Cc10_g09330 | |
| 43790 chr10 manual_curation mRNA 9443598 9445240 . - . ID=GSCOCT00031559001;Parent=GSCOCG00031559001;Name=Cc10_g09330 | |
| 43791 chr10 manual_curation polypeptide 9443598 9445240 . - . ID=GSCOCP00031559001;Dbxref=GENE3D:G3DSA:3.20.20.70,InterPro:IPR001155,InterPro:IPR013785,PFAM:PF00724,SwissProt:B9FSC8,SwissProt:Q8GYB8,SwissProt:Q9XG54,TAIR:AT1G09400.1,TAIR:AT1G76680.2,TAIR:AT1G76690.1,TrEMBL:F6I447,TrEMBL:F6I449,TrEMBL:I1JAQ7;Derives_from=GSCOCT00031559001;Name=Cc10_g09330;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,GO:0010181,GO:0016491,CC_EC_number:1.3.1.42,PRODUCT:12-oxophytodienoate reductase 1,CC_functional_completeness:fragment,CC_gene:OPR1,CC_gene:OPR11,CC_gene:OPR2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031559001~ 12-oxophytodienoate reductase 1~ OPR1~ fragment;original_location=join(2213565..2213616%2C2213934..2214098%2C2214615..2215207);owner=coffea | |
| 43792 chr10 manual_curation exon 9445189 9445240 . - . Parent=GSCOCT00031559001 | |
| 43793 chr10 manual_curation exon 9444707 9444871 . - . Parent=GSCOCT00031559001 | |
| 43794 chr10 manual_curation exon 9443598 9444190 . - . Parent=GSCOCT00031559001 | |
| 43795 chr10 manual_curation CDS 9445189 9445240 . - 0 Parent=GSCOCT00031559001 | |
| 43796 chr10 manual_curation CDS 9444707 9444871 . - 1 Parent=GSCOCT00031559001 | |
| 43797 chr10 manual_curation CDS 9443598 9444190 . - 1 Parent=GSCOCT00031559001 | |
| 43798 chr10 manual_curation gene 9445482 9452337 . - . ID=GSCOCG00031558001;Name=Cc10_g09340 | |
| 43799 chr10 manual_curation mRNA 9445482 9452337 . - . ID=GSCOCT00031558001;Parent=GSCOCG00031558001;Name=Cc10_g09340 | |
| 43800 chr10 manual_curation polypeptide 9445482 9452307 . - . ID=GSCOCP00031558001;Dbxref=GENE3D:G3DSA:3.20.20.70,InterPro:IPR001155,InterPro:IPR013785,PFAM:PF00724,SwissProt:Q8GYB8,SwissProt:Q8LAH7,SwissProt:Q9XG54,TAIR:AT1G09400.1,TAIR:AT1G76680.2,TAIR:AT1G76690.1,TrEMBL:A5AVR2,TrEMBL:F6I447,TrEMBL:F6I449;Derives_from=GSCOCT00031558001;Name=Cc10_g09340;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,GO:0010181,GO:0016491,CC_EC_number:1.3.1.42,PRODUCT:12-oxophytodienoate reductase 2,CC_functional_completeness:complete,CC_gene:OPR2,CC_gene:OPR1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031558001~ 12-oxophytodienoate reductase 2~ OPR2~ complete;original_location=join(2206498..2206610%2C2208261..2208401%2C2208535..2208665%2C2208972..2209148%2C2209418..2209996%2C2210106..2210171%2C2212742..2212937%2C2213176..2213323);owner=coffea | |
| 43801 chr10 manual_curation exon 9452195 9452337 . - . Parent=GSCOCT00031558001 | |
| 43802 chr10 manual_curation exon 9450404 9450544 . - . Parent=GSCOCT00031558001 | |
| 43803 chr10 manual_curation exon 9450140 9450270 . - . Parent=GSCOCT00031558001 | |
| 43804 chr10 manual_curation exon 9449657 9449833 . - . Parent=GSCOCT00031558001 | |
| 43805 chr10 manual_curation exon 9448809 9449387 . - . Parent=GSCOCT00031558001 | |
| 43806 chr10 manual_curation exon 9448634 9448699 . - . Parent=GSCOCT00031558001 | |
| 43807 chr10 manual_curation exon 9445868 9446063 . - . Parent=GSCOCT00031558001 | |
| 43808 chr10 manual_curation exon 9445482 9445629 . - . Parent=GSCOCT00031558001 | |
| 43809 chr10 manual_curation CDS 9452195 9452307 . - 0 Parent=GSCOCT00031558001 | |
| 43810 chr10 manual_curation CDS 9450404 9450544 . - 2 Parent=GSCOCT00031558001 | |
| 43811 chr10 manual_curation CDS 9450140 9450270 . - 2 Parent=GSCOCT00031558001 | |
| 43812 chr10 manual_curation CDS 9449657 9449833 . - 1 Parent=GSCOCT00031558001 | |
| 43813 chr10 manual_curation CDS 9448809 9449387 . - 1 Parent=GSCOCT00031558001 | |
| 43814 chr10 manual_curation CDS 9448634 9448699 . - 1 Parent=GSCOCT00031558001 | |
| 43815 chr10 manual_curation CDS 9445868 9446063 . - 1 Parent=GSCOCT00031558001 | |
| 43816 chr10 manual_curation CDS 9445482 9445629 . - 2 Parent=GSCOCT00031558001 | |
| 43817 chr10 manual_curation gene 9504194 9506616 . - . ID=GSCOCG00031557001;Name=Cc10_g09350 | |
| 43818 chr10 manual_curation mRNA 9504194 9506616 . - . ID=GSCOCT00031557001;Parent=GSCOCG00031557001;Name=Cc10_g09350 | |
| 43819 chr10 manual_curation polypeptide 9504471 9506538 . - . ID=GSCOCP00031557001;Dbxref=GENE3D:G3DSA:3.20.20.70,InterPro:IPR001155,InterPro:IPR013785,PFAM:PF00724,SwissProt:B9FSC8,SwissProt:Q8GYB8,SwissProt:Q8LAH7,TAIR:AT1G09400.1,TAIR:AT1G76680.2,TAIR:AT1G76690.1,TrEMBL:D7KTW1,TrEMBL:E4MVK3,TrEMBL:G7K3S2;Derives_from=GSCOCT00031557001;Name=Cc10_g09350;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,GO:0010181,GO:0016491,CC_EC_number:1.3.1.42,PRODUCT:12-oxophytodienoate reductase 1,CC_functional_completeness:complete,CC_gene:OPR1,CC_gene:OPR2,CC_gene:OPR11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031557001~ 12-oxophytodienoate reductase 1~ OPR1~ complete;original_location=join(2152267..2152358%2C2152643..2152783%2C2152876..2153006%2C2153475..2153657%2C2153739..2154334);owner=coffea | |
| 43820 chr10 manual_curation exon 9506447 9506616 . - . Parent=GSCOCT00031557001 | |
| 43821 chr10 manual_curation exon 9506022 9506162 . - . Parent=GSCOCT00031557001 | |
| 43822 chr10 manual_curation exon 9505799 9505929 . - . Parent=GSCOCT00031557001 | |
| 43823 chr10 manual_curation exon 9505148 9505330 . - . Parent=GSCOCT00031557001 | |
| 43824 chr10 manual_curation exon 9504194 9505066 . - . Parent=GSCOCT00031557001 | |
| 43825 chr10 manual_curation CDS 9506447 9506538 . - 0 Parent=GSCOCT00031557001 | |
| 43826 chr10 manual_curation CDS 9506022 9506162 . - 2 Parent=GSCOCT00031557001 | |
| 43827 chr10 manual_curation CDS 9505799 9505929 . - 2 Parent=GSCOCT00031557001 | |
| 43828 chr10 manual_curation CDS 9505148 9505330 . - 1 Parent=GSCOCT00031557001 | |
| 43829 chr10 manual_curation CDS 9504471 9505066 . - 1 Parent=GSCOCT00031557001 | |
| 43830 chr10 manual_curation gene 9520160 9522623 . - . ID=GSCOCG00031555001;Name=Cc10_g09360 | |
| 43831 chr10 manual_curation mRNA 9520160 9522623 . - . ID=GSCOCT00031555001;Parent=GSCOCG00031555001;Name=Cc10_g09360 | |
| 43832 chr10 manual_curation polypeptide 9520466 9522545 . - . ID=GSCOCP00031555001;Dbxref=GENE3D:G3DSA:3.20.20.70,InterPro:IPR001155,InterPro:IPR013785,PFAM:PF00724,SwissProt:B9FSC8,SwissProt:Q8GYB8,SwissProt:Q8LAH7,TAIR:AT1G09400.1,TAIR:AT1G76680.2,TAIR:AT1G76690.1,TrEMBL:G7K3S2,TrEMBL:G7K3S4,TrEMBL:O23777;Derives_from=GSCOCT00031555001;Name=Cc10_g09360;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,GO:0010181,GO:0016491,CC_EC_number:1.3.1.42,PRODUCT:12-oxophytodienoate reductase 2,CC_functional_completeness:complete,CC_gene:OPR2,CC_gene:OPR1,CC_gene:OPR11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031555001~ 12-oxophytodienoate reductase 2~ OPR2~ complete;original_location=join(2136260..2136348%2C2136648..2136788%2C2136880..2137010%2C2137409..2137588%2C2137744..2138339);owner=coffea | |
| 43833 chr10 manual_curation exon 9522457 9522623 . - . Parent=GSCOCT00031555001 | |
| 43834 chr10 manual_curation exon 9522017 9522157 . - . Parent=GSCOCT00031555001 | |
| 43835 chr10 manual_curation exon 9521795 9521925 . - . Parent=GSCOCT00031555001 | |
| 43836 chr10 manual_curation exon 9521217 9521396 . - . Parent=GSCOCT00031555001 | |
| 43837 chr10 manual_curation exon 9520160 9521061 . - . Parent=GSCOCT00031555001 | |
| 43838 chr10 manual_curation CDS 9522457 9522545 . - 0 Parent=GSCOCT00031555001 | |
| 43839 chr10 manual_curation CDS 9522017 9522157 . - 2 Parent=GSCOCT00031555001 | |
| 43840 chr10 manual_curation CDS 9521795 9521925 . - 2 Parent=GSCOCT00031555001 | |
| 43841 chr10 manual_curation CDS 9521217 9521396 . - 1 Parent=GSCOCT00031555001 | |
| 43842 chr10 manual_curation CDS 9520466 9521061 . - 1 Parent=GSCOCT00031555001 | |
| 43843 chr10 manual_curation gene 9536342 9541215 . - . ID=GSCOCG00031553001;Name=Cc10_g09370 | |
| 43844 chr10 manual_curation mRNA 9536342 9541215 . - . ID=GSCOCT00031553001;Parent=GSCOCG00031553001;Name=Cc10_g09370 | |
| 43845 chr10 manual_curation polypeptide 9537111 9540910 . - . ID=GSCOCP00031553001;Dbxref=GENE3D:G3DSA:1.20.1050.10,GENE3D:G3DSA:3.40.30.10,InterPro:IPR001662,InterPro:IPR004045,InterPro:IPR004046,InterPro:IPR010987,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR017933,PFAM:PF00043,PFAM:PF00647,PFAM:PF02798,PROFILE:PS50040,PROFILE:PS50404,PROFILE:PS50405,SUPERFAMILY:SSF47616,SUPERFAMILY:SSF52833,SUPERFAMILY:SSF89942,SwissProt:Q6YW46,SwissProt:Q9FUM1,SwissProt:Q9ZRI7,TAIR:AT1G09640.1,TAIR:AT1G57720.1,TAIR:AT2G30870.1,TrEMBL:A5AKT0,TrEMBL:B6TY76,TrEMBL:F6HK38;Derives_from=GSCOCT00031553001;Name=Cc10_g09370;Ontology_term=CC_evidence_code:ISS,GO:0003746,GO:0005853,GO:0006414,CC_EC_number:2.5.1.18,PRODUCT:Elongation factor 1-gamma 2,CC_functional_completeness:complete,CC_gene:Os02g0220500,CC_gene:Os02g0220600;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031553001~ Elongation factor 1-gamma 2~ Os02g0220500~ complete;original_location=join(2117895..2117903%2C2118371..2118520%2C2118626..2118686%2C2118778..2118830%2C2118931..2119032%2C2119168..2119678%2C2121315..2121694);owner=coffea | |
| 43846 chr10 manual_curation exon 9541061 9541215 . - . Parent=GSCOCT00031553001 | |
| 43847 chr10 manual_curation exon 9540902 9540946 . - . Parent=GSCOCT00031553001 | |
| 43848 chr10 manual_curation exon 9540285 9540434 . - . Parent=GSCOCT00031553001 | |
| 43849 chr10 manual_curation exon 9540119 9540179 . - . Parent=GSCOCT00031553001 | |
| 43850 chr10 manual_curation exon 9539975 9540027 . - . Parent=GSCOCT00031553001 | |
| 43851 chr10 manual_curation exon 9539773 9539874 . - . Parent=GSCOCT00031553001 | |
| 43852 chr10 manual_curation exon 9539127 9539637 . - . Parent=GSCOCT00031553001 | |
| 43853 chr10 manual_curation exon 9536342 9537490 . - . Parent=GSCOCT00031553001 | |
| 43854 chr10 manual_curation CDS 9540902 9540910 . - 0 Parent=GSCOCT00031553001 | |
| 43855 chr10 manual_curation CDS 9540285 9540434 . - 0 Parent=GSCOCT00031553001 | |
| 43856 chr10 manual_curation CDS 9540119 9540179 . - 0 Parent=GSCOCT00031553001 | |
| 43857 chr10 manual_curation CDS 9539975 9540027 . - 1 Parent=GSCOCT00031553001 | |
| 43858 chr10 manual_curation CDS 9539773 9539874 . - 0 Parent=GSCOCT00031553001 | |
| 43859 chr10 manual_curation CDS 9539127 9539637 . - 0 Parent=GSCOCT00031553001 | |
| 43860 chr10 manual_curation CDS 9537111 9537490 . - 1 Parent=GSCOCT00031553001 | |
| 43861 chr10 manual_curation gene 9544820 9546411 . + . ID=GSCOCG00031552001;Name=Cc10_g09380 | |
| 43862 chr10 manual_curation mRNA 9544820 9546411 . + . ID=GSCOCT00031552001;Parent=GSCOCG00031552001;Name=Cc10_g09380 | |
| 43863 chr10 manual_curation polypeptide 9544859 9546017 . + . ID=GSCOCP00031552001;Dbxref=TAIR:AT1G09645.1,TAIR:AT1G57765.2,TrEMBL:F6I456,TrEMBL:G7JN47,TrEMBL:I1KW74;Derives_from=GSCOCT00031552001;Name=Cc10_g09380;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031552001~ Putative unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09645.1).~ unknown_gene~ complete;original_location=complement(join(2113877..2113946%2C2112788..2113035));owner=coffea | |
| 43864 chr10 manual_curation exon 9545770 9546411 . + . Parent=GSCOCT00031552001 | |
| 43865 chr10 manual_curation exon 9544820 9544928 . + . Parent=GSCOCT00031552001 | |
| 43866 chr10 manual_curation CDS 9545770 9546017 . + 1 Parent=GSCOCT00031552001 | |
| 43867 chr10 manual_curation CDS 9544859 9544928 . + 0 Parent=GSCOCT00031552001 | |
| 43868 chr10 manual_curation gene 9566093 9576252 . + . ID=GSCOCG00031550001;Name=Cc10_g09390 | |
| 43869 chr10 manual_curation mRNA 9566093 9576252 . + . ID=GSCOCT00031550001;Parent=GSCOCG00031550001;Name=Cc10_g09390 | |
| 43870 chr10 manual_curation polypeptide 9567536 9575862 . + . ID=GSCOCP00031550001;Dbxref=InterPro:IPR002100,InterPro:IPR002487,PFAM:PF00319,PFAM:PF01486,PRINTS:PR00404,PROFILE:PS50066,PROFILE:PS51297,PROSITE:PS00350,SMART:SM00432,SUPERFAMILY:SSF55455,SwissProt:Q38836,SwissProt:Q40872,SwissProt:Q40885,TAIR:AT3G58780.3,TAIR:AT4G09960.3,TAIR:AT4G18960.1,TrEMBL:Q40882,TrEMBL:Q43616,TrEMBL:Q6QX56;Derives_from=GSCOCT00031550001;Name=Cc10_g09390;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0005634,GO:0043565,CC_EC_number:missing_EC_number,PRODUCT:Agamous-like MADS-box protein AGL11,CC_functional_completeness:complete,CC_gene:AGL11,CC_gene:AG2,CC_gene:AG1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031550001~ Agamous-like MADS-box protein AGL11~ AGL11~ complete;original_location=complement(join(2091088..2091269%2C2085582..2085666%2C2085397..2085458%2C2084773..2084872%2C2084001..2084042%2C2083857..2083898%2C2083166..2083323%2C2082943..2082961));owner=coffea | |
| 43871 chr10 manual_curation exon 9566093 9566218 . + . Parent=GSCOCT00031550001 | |
| 43872 chr10 manual_curation exon 9575844 9576252 . + . Parent=GSCOCT00031550001 | |
| 43873 chr10 manual_curation exon 9575482 9575639 . + . Parent=GSCOCT00031550001 | |
| 43874 chr10 manual_curation exon 9574907 9574948 . + . Parent=GSCOCT00031550001 | |
| 43875 chr10 manual_curation exon 9574763 9574804 . + . Parent=GSCOCT00031550001 | |
| 43876 chr10 manual_curation exon 9573933 9574032 . + . Parent=GSCOCT00031550001 | |
| 43877 chr10 manual_curation exon 9573347 9573408 . + . Parent=GSCOCT00031550001 | |
| 43878 chr10 manual_curation exon 9573139 9573223 . + . Parent=GSCOCT00031550001 | |
| 43879 chr10 manual_curation exon 9567527 9567717 . + . Parent=GSCOCT00031550001 | |
| 43880 chr10 manual_curation CDS 9575844 9575862 . + 2 Parent=GSCOCT00031550001 | |
| 43881 chr10 manual_curation CDS 9575482 9575639 . + 0 Parent=GSCOCT00031550001 | |
| 43882 chr10 manual_curation CDS 9574907 9574948 . + 0 Parent=GSCOCT00031550001 | |
| 43883 chr10 manual_curation CDS 9574763 9574804 . + 0 Parent=GSCOCT00031550001 | |
| 43884 chr10 manual_curation CDS 9573933 9574032 . + 2 Parent=GSCOCT00031550001 | |
| 43885 chr10 manual_curation CDS 9573347 9573408 . + 0 Parent=GSCOCT00031550001 | |
| 43886 chr10 manual_curation CDS 9573139 9573223 . + 2 Parent=GSCOCT00031550001 | |
| 43887 chr10 manual_curation CDS 9567536 9567717 . + 0 Parent=GSCOCT00031550001 | |
| 43888 chr10 manual_curation gene 9584907 9593407 . - . ID=GSCOCG00031549001;Name=Cc10_g09400 | |
| 43889 chr10 manual_curation mRNA 9584907 9593407 . - . ID=GSCOCT00031549001;Parent=GSCOCG00031549001;Name=Cc10_g09400 | |
| 43890 chr10 manual_curation polypeptide 9585110 9592856 . - . ID=GSCOCP00031549001;Dbxref=InterPro:IPR006703,PFAM:PF04548,SwissProt:O81025,SwissProt:P54120,SwissProt:Q9NUV9,TAIR:AT1G33950.1,TAIR:AT1G33970.1,TAIR:AT4G09940.1,TrEMBL:B9R8X8,TrEMBL:D7U934,TrEMBL:Q9ZRD1;Derives_from=GSCOCT00031549001;Name=Cc10_g09400;Ontology_term=CC_evidence_code:ISS,GO:0005525,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein AIG1,CC_functional_completeness:complete,CC_gene:PP2A3,CC_gene:AIG1,CC_gene:GIMAP4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031549001~ Putative Protein AIG1~ PP2A3~ complete;original_location=join(2065949..2066180%2C2066320..2066588%2C2071637..2071801%2C2071911..2072045%2C2073489..2073695);owner=coffea | |
| 43891 chr10 manual_curation exon 9593365 9593407 . - . Parent=GSCOCT00031549001 | |
| 43892 chr10 manual_curation exon 9592625 9592902 . - . Parent=GSCOCT00031549001 | |
| 43893 chr10 manual_curation exon 9592217 9592485 . - . Parent=GSCOCT00031549001 | |
| 43894 chr10 manual_curation exon 9587004 9587168 . - . Parent=GSCOCT00031549001 | |
| 43895 chr10 manual_curation exon 9586760 9586894 . - . Parent=GSCOCT00031549001 | |
| 43896 chr10 manual_curation exon 9584907 9585316 . - . Parent=GSCOCT00031549001 | |
| 43897 chr10 manual_curation CDS 9592625 9592856 . - 0 Parent=GSCOCT00031549001 | |
| 43898 chr10 manual_curation CDS 9592217 9592485 . - 1 Parent=GSCOCT00031549001 | |
| 43899 chr10 manual_curation CDS 9587004 9587168 . - 0 Parent=GSCOCT00031549001 | |
| 43900 chr10 manual_curation CDS 9586760 9586894 . - 0 Parent=GSCOCT00031549001 | |
| 43901 chr10 manual_curation CDS 9585110 9585316 . - 0 Parent=GSCOCT00031549001 | |
| 43902 chr10 manual_curation gene 9599245 9602744 . - . ID=GSCOCG00031548001;Name=Cc10_g09410 | |
| 43903 chr10 manual_curation mRNA 9599245 9602744 . - . ID=GSCOCT00031548001;Parent=GSCOCG00031548001;Name=Cc10_g09410 | |
| 43904 chr10 manual_curation polypeptide 9599604 9602207 . - . ID=GSCOCP00031548001;Dbxref=InterPro:IPR006703,PFAM:PF04548,SwissProt:O81025,SwissProt:P54120,SwissProt:Q9NUV9,TAIR:AT1G33930.1,TAIR:AT1G33970.1,TAIR:AT4G09940.1,TrEMBL:B9R8X8,TrEMBL:D7U934,TrEMBL:Q9ZRD1;Derives_from=GSCOCT00031548001;Name=Cc10_g09410;Ontology_term=CC_evidence_code:ISS,GO:0005525,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein AIG1,CC_functional_completeness:complete,CC_gene:PP2A3,CC_gene:AIG1,CC_gene:GIMAP4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031548001~ Putative Protein AIG1~ PP2A3~ complete;original_location=join(2056598..2056829%2C2056971..2057242%2C2058054..2058218%2C2058329..2058454%2C2058995..2059201);owner=coffea | |
| 43905 chr10 manual_curation exon 9602707 9602744 . - . Parent=GSCOCT00031548001 | |
| 43906 chr10 manual_curation exon 9601976 9602252 . - . Parent=GSCOCT00031548001 | |
| 43907 chr10 manual_curation exon 9601563 9601834 . - . Parent=GSCOCT00031548001 | |
| 43908 chr10 manual_curation exon 9600587 9600751 . - . Parent=GSCOCT00031548001 | |
| 43909 chr10 manual_curation exon 9600351 9600476 . - . Parent=GSCOCT00031548001 | |
| 43910 chr10 manual_curation exon 9599245 9599810 . - . Parent=GSCOCT00031548001 | |
| 43911 chr10 manual_curation CDS 9601976 9602207 . - 0 Parent=GSCOCT00031548001 | |
| 43912 chr10 manual_curation CDS 9601563 9601834 . - 1 Parent=GSCOCT00031548001 | |
| 43913 chr10 manual_curation CDS 9600587 9600751 . - 0 Parent=GSCOCT00031548001 | |
| 43914 chr10 manual_curation CDS 9600351 9600476 . - 0 Parent=GSCOCT00031548001 | |
| 43915 chr10 manual_curation CDS 9599604 9599810 . - 0 Parent=GSCOCT00031548001 | |
| 43916 chr10 manual_curation gene 9604413 9608782 . - . ID=GSCOCG00031547001;Name=Cc10_g09420 | |
| 43917 chr10 manual_curation mRNA 9604413 9608782 . - . ID=GSCOCT00031547001;Parent=GSCOCG00031547001;Name=Cc10_g09420 | |
| 43918 chr10 manual_curation polypeptide 9604794 9608259 . - . ID=GSCOCP00031547001;Dbxref=InterPro:IPR006703,PFAM:PF04548,SwissProt:O81025,SwissProt:P54120,SwissProt:Q9NUV9,TAIR:AT1G33930.1,TAIR:AT1G33970.1,TAIR:AT4G09940.1,TrEMBL:B9R8X8,TrEMBL:D7U934,TrEMBL:Q9ZRD1;Derives_from=GSCOCT00031547001;Name=Cc10_g09420;Ontology_term=CC_evidence_code:ISS,GO:0005525,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein AIG1,CC_functional_completeness:complete,CC_gene:AIG1,CC_gene:PP2A3,CC_gene:GIMAP4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031547001~ Putative Protein AIG1~ AIG1~ complete;original_location=join(2050546..2050777%2C2050953..2051224%2C2051982..2052146%2C2052272..2052406%2C2053799..2054011);owner=coffea | |
| 43919 chr10 manual_curation exon 9608743 9608782 . - . Parent=GSCOCT00031547001 | |
| 43920 chr10 manual_curation exon 9608028 9608279 . - . Parent=GSCOCT00031547001 | |
| 43921 chr10 manual_curation exon 9607581 9607852 . - . Parent=GSCOCT00031547001 | |
| 43922 chr10 manual_curation exon 9606659 9606823 . - . Parent=GSCOCT00031547001 | |
| 43923 chr10 manual_curation exon 9606399 9606533 . - . Parent=GSCOCT00031547001 | |
| 43924 chr10 manual_curation exon 9604413 9605006 . - . Parent=GSCOCT00031547001 | |
| 43925 chr10 manual_curation CDS 9608028 9608259 . - 0 Parent=GSCOCT00031547001 | |
| 43926 chr10 manual_curation CDS 9607581 9607852 . - 1 Parent=GSCOCT00031547001 | |
| 43927 chr10 manual_curation CDS 9606659 9606823 . - 0 Parent=GSCOCT00031547001 | |
| 43928 chr10 manual_curation CDS 9606399 9606533 . - 0 Parent=GSCOCT00031547001 | |
| 43929 chr10 manual_curation CDS 9604794 9605006 . - 0 Parent=GSCOCT00031547001 | |
| 43930 chr10 manual_curation gene 9616462 9622231 . + . ID=GSCOCG00031546001;Name=Cc10_g09430 | |
| 43931 chr10 manual_curation mRNA 9616462 9622231 . + . ID=GSCOCT00031546001;Parent=GSCOCG00031546001;Name=Cc10_g09430 | |
| 43932 chr10 manual_curation polypeptide 9616494 9622069 . + . ID=GSCOCP00031546001;Dbxref=InterPro:IPR006703,PFAM:PF04548,SwissProt:O81025,SwissProt:P54120,SwissProt:Q9NUV9,TAIR:AT1G33930.1,TAIR:AT1G33970.1,TAIR:AT4G09940.1,TrEMBL:B9R8X8,TrEMBL:D7U934,TrEMBL:Q9ZRD1;Derives_from=GSCOCT00031546001;Name=Cc10_g09430;Ontology_term=CC_evidence_code:ISS,GO:0005525,CC_EC_number:missing_EC_number,PRODUCT:Putative protein PHLOEM PROTEIN 2-LIKE A3,CC_functional_completeness:fragment,CC_gene:PP2A3,CC_gene:AIG1,CC_gene:GIMAP4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031546001~ Putative protein PHLOEM PROTEIN 2-LIKE A3~ PP2A3~ fragment;original_location=complement(join(2042201..2042311%2C2041190..2041463%2C2040761..2041032%2C2039585..2039749%2C2039355..2039489%2C2036736..2036948));owner=coffea | |
| 43933 chr10 manual_curation exon 9621857 9622231 . + . Parent=GSCOCT00031546001 | |
| 43934 chr10 manual_curation exon 9619316 9619450 . + . Parent=GSCOCT00031546001 | |
| 43935 chr10 manual_curation exon 9619056 9619220 . + . Parent=GSCOCT00031546001 | |
| 43936 chr10 manual_curation exon 9617773 9618044 . + . Parent=GSCOCT00031546001 | |
| 43937 chr10 manual_curation exon 9617342 9617615 . + . Parent=GSCOCT00031546001 | |
| 43938 chr10 manual_curation exon 9616462 9616604 . + . Parent=GSCOCT00031546001 | |
| 43939 chr10 manual_curation CDS 9621857 9622069 . + 0 Parent=GSCOCT00031546001 | |
| 43940 chr10 manual_curation CDS 9619316 9619450 . + 0 Parent=GSCOCT00031546001 | |
| 43941 chr10 manual_curation CDS 9619056 9619220 . + 0 Parent=GSCOCT00031546001 | |
| 43942 chr10 manual_curation CDS 9617773 9618044 . + 1 Parent=GSCOCT00031546001 | |
| 43943 chr10 manual_curation CDS 9617342 9617615 . + 0 Parent=GSCOCT00031546001 | |
| 43944 chr10 manual_curation CDS 9616494 9616604 . + 0 Parent=GSCOCT00031546001 | |
| 43945 chr10 manual_curation gene 9633210 9634489 . + . ID=GSCOCG00031543001;Name=Cc10_g09440 | |
| 43946 chr10 manual_curation mRNA 9633210 9634489 . + . ID=GSCOCT00031543001;Parent=GSCOCG00031543001;Name=Cc10_g09440 | |
| 43947 chr10 manual_curation polypeptide 9633210 9634489 . + . ID=GSCOCP00031543001;Dbxref=GENE3D:G3DSA:2.60.120.200,InterPro:IPR001220,InterPro:IPR001245,InterPro:IPR008985,InterPro:IPR011009,InterPro:IPR013320,PFAM:PF00139,PFAM:PF07714,SUPERFAMILY:SSF49899,SUPERFAMILY:SSF56112,SwissProt:Q9FID9,SwissProt:Q9LSL5,SwissProt:Q9LXA5,TAIR:AT5G10530.1,TAIR:AT5G38990.1,TAIR:AT5G65600.1,TrEMBL:B8B7I5,TrEMBL:B9SMM3,TrEMBL:C7A7Q8;Derives_from=GSCOCT00031543001;Name=Cc10_g09440;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0005488,GO:0005524,GO:0006468,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:LECRK91,CC_gene:LECRK92,CC_gene:At5g38990;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031543001~ Putative uncharacterized protein~ LECRK91~ fragment;original_location=complement(join(2025356..2025595%2C2024692..2024845%2C2024316..2024527));owner=coffea | |
| 43948 chr10 manual_curation exon 9634278 9634489 . + . Parent=GSCOCT00031543001 | |
| 43949 chr10 manual_curation exon 9633960 9634113 . + . Parent=GSCOCT00031543001 | |
| 43950 chr10 manual_curation exon 9633210 9633449 . + . Parent=GSCOCT00031543001 | |
| 43951 chr10 manual_curation CDS 9634278 9634489 . + 1 Parent=GSCOCT00031543001 | |
| 43952 chr10 manual_curation CDS 9633960 9634113 . + 0 Parent=GSCOCT00031543001 | |
| 43953 chr10 manual_curation CDS 9633210 9633449 . + 0 Parent=GSCOCT00031543001 | |
| 43954 chr10 manual_curation gene 9667625 9667855 . + . ID=GSCOCG00031541001;Name=Cc10_g09450 | |
| 43955 chr10 manual_curation mRNA 9667625 9667855 . + . ID=GSCOCT00031541001;Parent=GSCOCG00031541001;Name=Cc10_g09450 | |
| 43956 chr10 manual_curation polypeptide 9667625 9667855 . + . ID=GSCOCP00031541001;Dbxref=InterPro:IPR000719,InterPro:IPR011009,InterPro:IPR017442,PFAM:PF00069,PROFILE:PS50011,SUPERFAMILY:SSF56112,SwissProt:Q9LFH9,SwissProt:Q9LSL5,SwissProt:Q9LXA5,TAIR:AT3G53380.1,TAIR:AT5G10530.1,TAIR:AT5G65600.1,TrEMBL:B9SML3,TrEMBL:D7M2Y1,TrEMBL:Q4ABY8;Derives_from=GSCOCT00031541001;Name=Cc10_g09450;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0005524,GO:0006468,CC_EC_number:missing_EC_number,PRODUCT:L-type lectin-domain containing receptor kinase IX.1,CC_functional_completeness:fragment,CC_gene:LECRK91,CC_gene:LECRK92,CC_gene:LECRK81;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031541001~ L-type lectin-domain containing receptor kinase IX.1~ LECRK91~ fragment;original_location=complement(1990950..1991180);owner=coffea | |
| 43957 chr10 manual_curation exon 9667625 9667855 . + . Parent=GSCOCT00031541001 | |
| 43958 chr10 manual_curation CDS 9667625 9667855 . + 0 Parent=GSCOCT00031541001 | |
| 43959 chr10 manual_curation gene 9685541 9690659 . - . ID=GSCOCG00031540001;Name=Cc10_g09460 | |
| 43960 chr10 manual_curation mRNA 9685541 9690659 . - . ID=GSCOCT00031540001;Parent=GSCOCG00031540001;Name=Cc10_g09460 | |
| 43961 chr10 manual_curation polypeptide 9685850 9690471 . - . ID=GSCOCP00031540001;Dbxref=InterPro:IPR000073,PFAM:PF00561,SwissProt:O23512,SwissProt:Q2V0W1,SwissProt:Q9FVW3,TAIR:AT1G26360.1,TAIR:AT1G33990.1,TAIR:AT4G09900.1,TrEMBL:B9IQD5,TrEMBL:B9MWF1,TrEMBL:B9R8X6;Derives_from=GSCOCT00031540001;Name=Cc10_g09460;Ontology_term=CC_evidence_code:ISS,CC_EC_number:3.1.1.78,PRODUCT:Probable esterase At1g33990,CC_functional_completeness:complete,CC_gene:At1g33990,CC_gene:PPD;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031540001~ Probable esterase At1g33990~ At1g33990~ complete;original_location=join(1968334..1968603%2C1970481..1970720%2C1970809..1970952%2C1971397..1971531%2C1972683..1972955);owner=coffea | |
| 43962 chr10 manual_curation exon 9690202 9690659 . - . Parent=GSCOCT00031540001 | |
| 43963 chr10 manual_curation exon 9688085 9688324 . - . Parent=GSCOCT00031540001 | |
| 43964 chr10 manual_curation exon 9687853 9687996 . - . Parent=GSCOCT00031540001 | |
| 43965 chr10 manual_curation exon 9687274 9687408 . - . Parent=GSCOCT00031540001 | |
| 43966 chr10 manual_curation exon 9685541 9686122 . - . Parent=GSCOCT00031540001 | |
| 43967 chr10 manual_curation CDS 9690202 9690471 . - 0 Parent=GSCOCT00031540001 | |
| 43968 chr10 manual_curation CDS 9688085 9688324 . - 0 Parent=GSCOCT00031540001 | |
| 43969 chr10 manual_curation CDS 9687853 9687996 . - 0 Parent=GSCOCT00031540001 | |
| 43970 chr10 manual_curation CDS 9687274 9687408 . - 0 Parent=GSCOCT00031540001 | |
| 43971 chr10 manual_curation CDS 9685850 9686122 . - 0 Parent=GSCOCT00031540001 | |
| 43972 chr10 manual_curation gene 9698579 9712260 . - . ID=GSCOCG00031539001;Name=Cc10_g09470 | |
| 43973 chr10 manual_curation mRNA 9698579 9712260 . - . ID=GSCOCT00031539001;Parent=GSCOCG00031539001;Name=Cc10_g09470 | |
| 43974 chr10 manual_curation polypeptide 9698813 9712169 . - . ID=GSCOCP00031539001;Dbxref=GENE3D:G3DSA:3.30.230.10,GENE3D:G3DSA:3.30.565.10,InterPro:IPR002099,InterPro:IPR003594,InterPro:IPR011186,InterPro:IPR013507,InterPro:IPR014721,InterPro:IPR014762,InterPro:IPR014763,InterPro:IPR020568,PANTHER:PTHR10073,PANTHER:PTHR10073:SF11,PFAM:PF01119,PFAM:PF02518,PROSITE:PS00058,SUPERFAMILY:SSF54211,SUPERFAMILY:SSF55874,SwissProt:P40692,SwissProt:P97679,SwissProt:Q9JK91,TAIR:AT4G02460.1,TAIR:AT4G09140.1,TAIR:AT4G35520.1,TIGRFAMs:TIGR00585,TrEMBL:B9IQE4,TrEMBL:Q9C5F9,TrEMBL:Q9ZRV4;Derives_from=GSCOCT00031539001;Name=Cc10_g09470;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0005634,GO:0006298,GO:0030983,CC_EC_number:missing_EC_number,PRODUCT:Putative DNA mismatch repair protein Mlh1,CC_functional_completeness:complete,CC_gene:MLH1,CC_gene:Mlh1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031539001~ Putative DNA mismatch repair protein Mlh1~ MLH1~ complete;original_location=join(1946636..1946872%2C1947893..1948065%2C1948215..1948287%2C1948876..1949010%2C1949112..1949322%2C1949846..1949994%2C1951616..1951714%2C1953337..1953406%2C1953534..1953666%2C1954139..1954233%2C1954323..1954431%2C1955419..1955584%2C1957759..1957920%2C1958995..1959166%2C1959563..1959723%2C1959948..1959992);owner=coffea | |
| 43975 chr10 manual_curation exon 9711933 9712260 . - . Parent=GSCOCT00031539001 | |
| 43976 chr10 manual_curation exon 9710740 9710912 . - . Parent=GSCOCT00031539001 | |
| 43977 chr10 manual_curation exon 9710518 9710590 . - . Parent=GSCOCT00031539001 | |
| 43978 chr10 manual_curation exon 9709795 9709929 . - . Parent=GSCOCT00031539001 | |
| 43979 chr10 manual_curation exon 9709483 9709693 . - . Parent=GSCOCT00031539001 | |
| 43980 chr10 manual_curation exon 9708811 9708959 . - . Parent=GSCOCT00031539001 | |
| 43981 chr10 manual_curation exon 9707091 9707189 . - . Parent=GSCOCT00031539001 | |
| 43982 chr10 manual_curation exon 9705399 9705468 . - . Parent=GSCOCT00031539001 | |
| 43983 chr10 manual_curation exon 9705139 9705271 . - . Parent=GSCOCT00031539001 | |
| 43984 chr10 manual_curation exon 9704572 9704666 . - . Parent=GSCOCT00031539001 | |
| 43985 chr10 manual_curation exon 9704374 9704482 . - . Parent=GSCOCT00031539001 | |
| 43986 chr10 manual_curation exon 9703221 9703386 . - . Parent=GSCOCT00031539001 | |
| 43987 chr10 manual_curation exon 9700885 9701046 . - . Parent=GSCOCT00031539001 | |
| 43988 chr10 manual_curation exon 9699639 9699810 . - . Parent=GSCOCT00031539001 | |
| 43989 chr10 manual_curation exon 9699082 9699242 . - . Parent=GSCOCT00031539001 | |
| 43990 chr10 manual_curation exon 9698579 9698857 . - . Parent=GSCOCT00031539001 | |
| 43991 chr10 manual_curation CDS 9711933 9712169 . - 0 Parent=GSCOCT00031539001 | |
| 43992 chr10 manual_curation CDS 9710740 9710912 . - 0 Parent=GSCOCT00031539001 | |
| 43993 chr10 manual_curation CDS 9710518 9710590 . - 2 Parent=GSCOCT00031539001 | |
| 43994 chr10 manual_curation CDS 9709795 9709929 . - 0 Parent=GSCOCT00031539001 | |
| 43995 chr10 manual_curation CDS 9709483 9709693 . - 0 Parent=GSCOCT00031539001 | |
| 43996 chr10 manual_curation CDS 9708811 9708959 . - 1 Parent=GSCOCT00031539001 | |
| 43997 chr10 manual_curation CDS 9707091 9707189 . - 0 Parent=GSCOCT00031539001 | |
| 43998 chr10 manual_curation CDS 9705399 9705468 . - 0 Parent=GSCOCT00031539001 | |
| 43999 chr10 manual_curation CDS 9705139 9705271 . - 1 Parent=GSCOCT00031539001 | |
| 44000 chr10 manual_curation CDS 9704572 9704666 . - 2 Parent=GSCOCT00031539001 | |
| 44001 chr10 manual_curation CDS 9704374 9704482 . - 1 Parent=GSCOCT00031539001 | |
| 44002 chr10 manual_curation CDS 9703221 9703386 . - 2 Parent=GSCOCT00031539001 | |
| 44003 chr10 manual_curation CDS 9700885 9701046 . - 0 Parent=GSCOCT00031539001 | |
| 44004 chr10 manual_curation CDS 9699639 9699810 . - 0 Parent=GSCOCT00031539001 | |
| 44005 chr10 manual_curation CDS 9699082 9699242 . - 1 Parent=GSCOCT00031539001 | |
| 44006 chr10 manual_curation CDS 9698813 9698857 . - 0 Parent=GSCOCT00031539001 | |
| 44007 chr10 manual_curation gene 9713278 9716013 . - . ID=GSCOCG00031538001;Name=Cc10_g09480 | |
| 44008 chr10 manual_curation mRNA 9713278 9716013 . - . ID=GSCOCT00031538001;Parent=GSCOCG00031538001;Name=Cc10_g09480 | |
| 44009 chr10 manual_curation polypeptide 9713646 9716013 . - . ID=GSCOCP00031538001;Dbxref=SwissProt:Q84L14,SwissProt:Q9XFD1,TAIR:AT5G44200.1,TrEMBL:A9PIB0,TrEMBL:B9MYE5,TrEMBL:C0L7C4;Derives_from=GSCOCT00031538001;Name=Cc10_g09480;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Nuclear cap-binding protein subunit 2,CC_functional_completeness:fragment,CC_gene:CBP20;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031538001~ Nuclear cap-binding protein subunit 2~ CBP20~ fragment;original_location=join(1942792..1942801%2C1943366..1943494%2C1944110..1944163%2C1944253..1944359%2C1945085..1945159);owner=coffea | |
| 44010 chr10 manual_curation exon 9716004 9716013 . - . Parent=GSCOCT00031538001 | |
| 44011 chr10 manual_curation exon 9715311 9715439 . - . Parent=GSCOCT00031538001 | |
| 44012 chr10 manual_curation exon 9714642 9714695 . - . Parent=GSCOCT00031538001 | |
| 44013 chr10 manual_curation exon 9714446 9714552 . - . Parent=GSCOCT00031538001 | |
| 44014 chr10 manual_curation exon 9713278 9713720 . - . Parent=GSCOCT00031538001 | |
| 44015 chr10 manual_curation CDS 9716004 9716013 . - 0 Parent=GSCOCT00031538001 | |
| 44016 chr10 manual_curation CDS 9715311 9715439 . - 1 Parent=GSCOCT00031538001 | |
| 44017 chr10 manual_curation CDS 9714642 9714695 . - 1 Parent=GSCOCT00031538001 | |
| 44018 chr10 manual_curation CDS 9714446 9714552 . - 1 Parent=GSCOCT00031538001 | |
| 44019 chr10 manual_curation CDS 9713646 9713720 . - 0 Parent=GSCOCT00031538001 | |
| 44020 chr10 manual_curation gene 9716075 9719179 . - . ID=GSCOCG00031537001;Name=Cc10_g09490 | |
| 44021 chr10 manual_curation mRNA 9716075 9719179 . - . ID=GSCOCT00031537001;Parent=GSCOCG00031537001;Name=Cc10_g09490 | |
| 44022 chr10 manual_curation polypeptide 9716949 9718869 . - . ID=GSCOCP00031537001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR012677,PFAM:PF00076,PROFILE:PS50102,SMART:SM00360,SwissProt:P52298,SwissProt:Q84L14,SwissProt:Q9XFD1,TAIR:AT5G44200.1,TrEMBL:B9MYE5,TrEMBL:B9RVU5,TrEMBL:C0P5N7;Derives_from=GSCOCT00031537001;Name=Cc10_g09490;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,CC_EC_number:missing_EC_number,PRODUCT:Nuclear cap-binding protein subunit 2,CC_functional_completeness:fragment,CC_gene:CBP20,CC_gene:NCBP2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031537001~ Nuclear cap-binding protein subunit 2~ CBP20~ fragment;original_location=join(1939936..1939953%2C1940180..1940403%2C1941505..1941643%2C1941746..1941856);owner=coffea | |
| 44023 chr10 manual_curation exon 9719035 9719179 . - . Parent=GSCOCT00031537001 | |
| 44024 chr10 manual_curation exon 9718852 9718914 . - . Parent=GSCOCT00031537001 | |
| 44025 chr10 manual_curation exon 9718402 9718625 . - . Parent=GSCOCT00031537001 | |
| 44026 chr10 manual_curation exon 9717162 9717300 . - . Parent=GSCOCT00031537001 | |
| 44027 chr10 manual_curation exon 9716075 9717059 . - . Parent=GSCOCT00031537001 | |
| 44028 chr10 manual_curation CDS 9718852 9718869 . - 0 Parent=GSCOCT00031537001 | |
| 44029 chr10 manual_curation CDS 9718402 9718625 . - 0 Parent=GSCOCT00031537001 | |
| 44030 chr10 manual_curation CDS 9717162 9717300 . - 2 Parent=GSCOCT00031537001 | |
| 44031 chr10 manual_curation CDS 9716949 9717059 . - 0 Parent=GSCOCT00031537001 | |
| 44032 chr10 manual_curation gene 9736409 9740403 . + . ID=GSCOCG00031536001;Name=Cc10_g09500 | |
| 44033 chr10 manual_curation mRNA 9736409 9740403 . + . ID=GSCOCT00031536001;Parent=GSCOCG00031536001;Name=Cc10_g09500 | |
| 44034 chr10 manual_curation polypeptide 9736470 9739990 . + . ID=GSCOCP00031536001;Dbxref=InterPro:IPR001189,InterPro:IPR019831,InterPro:IPR019832,InterPro:IPR019833,PANTHER:PTHR11404,PFAM:PF00081,PFAM:PF02777,PIR:PIRSF000349,PRINTS:PR01703,PROSITE:PS00088,SUPERFAMILY:SSF46609,SUPERFAMILY:SSF54719,SwissProt:P21276,SwissProt:P22302,SwissProt:P28759,TAIR:AT4G25100.1,TAIR:AT5G23310.1,TAIR:AT5G51100.1,TrEMBL:E1AK65,TrEMBL:E1AK66,TrEMBL:E1AK69;Derives_from=GSCOCT00031536001;Name=Cc10_g09500;Ontology_term=CC_evidence_code:ISS,GO:0004784,GO:0006801,GO:0046872,GO:0055114,CC_EC_number:1.15.1.1,PRODUCT:Superoxide dismutase [Fe]%2C chloroplastic (Fragment),CC_functional_completeness:modules,CC_gene:SODB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031536001~ Superoxide dismutase [Fe]%2C chloroplastic (Fragment)~ SODB~ modules;original_location=complement(join(1922237..1922335%2C1921690..1921782%2C1920815..1921006%2C1920202..1920373%2C1919314..1919387%2C1919192..1919218%2C1919017..1919040%2C1918815..1918940));owner=coffea | |
| 44035 chr10 manual_curation exon 9739865 9740403 . + . Parent=GSCOCT00031536001 | |
| 44036 chr10 manual_curation exon 9739765 9739788 . + . Parent=GSCOCT00031536001 | |
| 44037 chr10 manual_curation exon 9739587 9739613 . + . Parent=GSCOCT00031536001 | |
| 44038 chr10 manual_curation exon 9739418 9739491 . + . Parent=GSCOCT00031536001 | |
| 44039 chr10 manual_curation exon 9738432 9738603 . + . Parent=GSCOCT00031536001 | |
| 44040 chr10 manual_curation exon 9737799 9737990 . + . Parent=GSCOCT00031536001 | |
| 44041 chr10 manual_curation exon 9737023 9737115 . + . Parent=GSCOCT00031536001 | |
| 44042 chr10 manual_curation exon 9736409 9736568 . + . Parent=GSCOCT00031536001 | |
| 44043 chr10 manual_curation CDS 9739865 9739990 . + 0 Parent=GSCOCT00031536001 | |
| 44044 chr10 manual_curation CDS 9739765 9739788 . + 0 Parent=GSCOCT00031536001 | |
| 44045 chr10 manual_curation CDS 9739587 9739613 . + 0 Parent=GSCOCT00031536001 | |
| 44046 chr10 manual_curation CDS 9739418 9739491 . + 1 Parent=GSCOCT00031536001 | |
| 44047 chr10 manual_curation CDS 9738432 9738603 . + 0 Parent=GSCOCT00031536001 | |
| 44048 chr10 manual_curation CDS 9737799 9737990 . + 0 Parent=GSCOCT00031536001 | |
| 44049 chr10 manual_curation CDS 9737023 9737115 . + 0 Parent=GSCOCT00031536001 | |
| 44050 chr10 manual_curation CDS 9736470 9736568 . + 0 Parent=GSCOCT00031536001 | |
| 44051 chr10 manual_curation gene 9754675 9758968 . + . ID=GSCOCG00031534001;Name=Cc10_g09510 | |
| 44052 chr10 manual_curation mRNA 9754675 9758968 . + . ID=GSCOCT00031534001;Parent=GSCOCG00031534001;Name=Cc10_g09510 | |
| 44053 chr10 manual_curation polypeptide 9755492 9758968 . + . ID=GSCOCP00031534001;Dbxref=InterPro:IPR000629,InterPro:IPR001650,InterPro:IPR011545,InterPro:IPR014001,InterPro:IPR014014,InterPro:IPR014021,PFAM:PF00270,PFAM:PF00271,PROFILE:PS51192,PROFILE:PS51194,PROFILE:PS51195,PROSITE:PS00039,SMART:SM00487,SMART:SM00490,SwissProt:Q0J7Y8,SwissProt:Q8H0U8,SwissProt:Q9SF41,TAIR:AT1G20920.1,TAIR:AT3G09620.1,TAIR:AT5G63120.2,TrEMBL:B9SW84,TrEMBL:F6I0P5,TrEMBL:I1JAI4;Derives_from=GSCOCT00031534001;Name=Cc10_g09510;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0004386,GO:0005524,GO:0008026,CC_EC_number:missing_EC_number,PRODUCT:DEAD-box ATP-dependent RNA helicase 42,CC_functional_completeness:complete,CC_gene:RH42,CC_gene:RH45,CC_gene:Os08g0154200;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031534001~ DEAD-box ATP-dependent RNA helicase 42~ RH42~ complete;original_location=complement(1899837..1903313);owner=coffea | |
| 44054 chr10 manual_curation exon 9754675 9754938 . + . Parent=GSCOCT00031534001 | |
| 44055 chr10 manual_curation exon 9755231 9758968 . + . Parent=GSCOCT00031534001 | |
| 44056 chr10 manual_curation CDS 9755492 9758968 . + 0 Parent=GSCOCT00031534001 | |
| 44057 chr10 manual_curation gene 9764737 9770871 . - . ID=GSCOCG00031532001;Name=Cc10_g09520 | |
| 44058 chr10 manual_curation mRNA 9764737 9770871 . - . ID=GSCOCT00031532001;Parent=GSCOCG00031532001;Name=Cc10_g09520 | |
| 44059 chr10 manual_curation polypeptide 9765110 9770662 . - . ID=GSCOCP00031532001;Dbxref=InterPro:IPR001841,InterPro:IPR010652,InterPro:IPR017907,PFAM:PF06803,PROFILE:PS50089,PROSITE:PS00518,SMART:SM00184,SwissProt:Q28DS3,SwissProt:Q7SZN2,SwissProt:Q8CBG9,TAIR:AT1G22510.2,TAIR:AT1G72175.1,TAIR:AT4G33940.1,TrEMBL:B9IQE5,TrEMBL:B9MWE4,TrEMBL:C6SYF0;Derives_from=GSCOCT00031532001;Name=Cc10_g09520;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative RING finger protein 170,CC_functional_completeness:fragment,CC_gene:rnf170,CC_gene:Rnf170;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031532001~ Putative RING finger protein 170~ rnf170~ fragment;original_location=join(1888143..1888233%2C1890106..1890305%2C1893115..1893216%2C1893442..1893493%2C1893583..1893695);owner=coffea | |
| 44060 chr10 manual_curation exon 9770572 9770871 . - . Parent=GSCOCT00031532001 | |
| 44061 chr10 manual_curation exon 9768500 9768699 . - . Parent=GSCOCT00031532001 | |
| 44062 chr10 manual_curation exon 9765589 9765690 . - . Parent=GSCOCT00031532001 | |
| 44063 chr10 manual_curation exon 9765312 9765363 . - . Parent=GSCOCT00031532001 | |
| 44064 chr10 manual_curation exon 9764737 9765222 . - . Parent=GSCOCT00031532001 | |
| 44065 chr10 manual_curation CDS 9770572 9770662 . - 0 Parent=GSCOCT00031532001 | |
| 44066 chr10 manual_curation CDS 9768500 9768699 . - 1 Parent=GSCOCT00031532001 | |
| 44067 chr10 manual_curation CDS 9765589 9765690 . - 0 Parent=GSCOCT00031532001 | |
| 44068 chr10 manual_curation CDS 9765312 9765363 . - 0 Parent=GSCOCT00031532001 | |
| 44069 chr10 manual_curation CDS 9765110 9765222 . - 1 Parent=GSCOCT00031532001 | |
| 44070 chr10 manual_curation gene 9780713 9785390 . + . ID=GSCOCG00031531001;Name=Cc10_g09530 | |
| 44071 chr10 manual_curation mRNA 9780713 9785390 . + . ID=GSCOCT00031531001;Parent=GSCOCG00031531001;Name=Cc10_g09530 | |
| 44072 chr10 manual_curation polypeptide 9784092 9785390 . + . ID=GSCOCP00031531001;Dbxref=GENE3D:G3DSA:3.40.630.30,InterPro:IPR000903,InterPro:IPR016181,InterPro:IPR022676,InterPro:IPR022677,InterPro:IPR022678,PANTHER:PTHR11377,PFAM:PF01233,PFAM:PF02799,PIR:PIRSF015892,PROSITE:PS00975,PROSITE:PS00976,SUPERFAMILY:SSF55729,SwissProt:Q94L32,SwissProt:Q9LTR9,SwissProt:Q9N181,TAIR:AT2G44175.1,TAIR:AT5G57020.1,TrEMBL:F6HXZ6,TrEMBL:I1KUQ9,TrEMBL:I1L1K9;Derives_from=GSCOCT00031531001;Name=Cc10_g09530;Ontology_term=CC_evidence_code:ISS,GO:0004379,GO:0006499,CC_EC_number:2.3.1.97,PRODUCT:Glycylpeptide N-tetradecanoyltransferase 1,CC_functional_completeness:complete,CC_gene:NMT1,CC_gene:NMT2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031531001~ Glycylpeptide N-tetradecanoyltransferase 1~ NMT1~ complete;original_location=complement(1873415..1874713);owner=coffea | |
| 44073 chr10 manual_curation exon 9781046 9781095 . + . Parent=GSCOCT00031531001 | |
| 44074 chr10 manual_curation exon 9780713 9780857 . + . Parent=GSCOCT00031531001 | |
| 44075 chr10 manual_curation exon 9784070 9785390 . + . Parent=GSCOCT00031531001 | |
| 44076 chr10 manual_curation CDS 9784092 9785390 . + 0 Parent=GSCOCT00031531001 | |
| 44077 chr10 manual_curation gene 9785450 9786022 . - . ID=GSCOCG00031530001;Name=Cc10_g09540 | |
| 44078 chr10 manual_curation mRNA 9785450 9786022 . - . ID=GSCOCT00031530001;Parent=GSCOCG00031530001;Name=Cc10_g09540 | |
| 44079 chr10 manual_curation polypeptide 9785837 9786022 . - . ID=GSCOCP00031530001;Derives_from=GSCOCT00031530001;Name=Cc10_g09540;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031530001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1872783..1872968;owner=coffea | |
| 44080 chr10 manual_curation exon 9785450 9786022 . - . Parent=GSCOCT00031530001 | |
| 44081 chr10 manual_curation CDS 9785837 9786022 . - 0 Parent=GSCOCT00031530001 | |
| 44082 chr10 manual_curation gene 9788656 9792215 . + . ID=GSCOCG00031529001;Name=Cc10_g09550 | |
| 44083 chr10 manual_curation mRNA 9788656 9792215 . + . ID=GSCOCT00031529001;Parent=GSCOCG00031529001;Name=Cc10_g09550 | |
| 44084 chr10 manual_curation polypeptide 9788656 9790674 . + . ID=GSCOCP00031529001;Dbxref=InterPro:IPR007851,InterPro:IPR018034,PANTHER:PTHR14490,PFAM:PF05178,SwissProt:Q0V8M0,SwissProt:Q8N9T8,SwissProt:Q8VDQ9,TAIR:AT3G24080.1,TrEMBL:F6GX16,TrEMBL:I1L0F5,TrEMBL:I1MG49;Derives_from=GSCOCT00031529001;Name=Cc10_g09550;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein KRI1 homolog,CC_functional_completeness:complete,CC_gene:Kri1,CC_gene:KRI1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031529001~ Putative Protein KRI1 homolog~ Kri1~ complete;original_location=complement(1868131..1870149);owner=coffea | |
| 44085 chr10 manual_curation exon 9792117 9792215 . + . Parent=GSCOCT00031529001 | |
| 44086 chr10 manual_curation exon 9788656 9790692 . + . Parent=GSCOCT00031529001 | |
| 44087 chr10 manual_curation CDS 9788656 9790674 . + 0 Parent=GSCOCT00031529001 | |
| 44088 chr10 manual_curation gene 9792417 9793144 . - . ID=GSCOCG00031528001;Name=Cc10_g09560 | |
| 44089 chr10 manual_curation mRNA 9792417 9793144 . - . ID=GSCOCT00031528001;Parent=GSCOCG00031528001;Name=Cc10_g09560 | |
| 44090 chr10 manual_curation polypeptide 9792917 9793144 . - . ID=GSCOCP00031528001;Derives_from=GSCOCT00031528001;Name=Cc10_g09560;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031528001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1865661..1865888;owner=coffea | |
| 44091 chr10 manual_curation exon 9792417 9793144 . - . Parent=GSCOCT00031528001 | |
| 44092 chr10 manual_curation CDS 9792917 9793144 . - 0 Parent=GSCOCT00031528001 | |
| 44093 chr10 manual_curation gene 9794083 9797841 . - . ID=GSCOCG00031526001;Name=Cc10_g09570 | |
| 44094 chr10 manual_curation mRNA 9794083 9797841 . - . ID=GSCOCT00031526001;Parent=GSCOCG00031526001;Name=Cc10_g09570 | |
| 44095 chr10 manual_curation polypeptide 9794083 9797712 . - . ID=GSCOCP00031526001;Dbxref=InterPro:IPR003690,PFAM:PF02536,SMART:SM00733,TAIR:AT1G21150.1,TAIR:AT1G61980.1,TAIR:AT5G07900.1,TrEMBL:B9SL56,TrEMBL:F6HDG3,TrEMBL:F6HQ02;Derives_from=GSCOCT00031526001;Name=Cc10_g09570;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Mitochondrial transcription termination factor family protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031526001~ Putative Mitochondrial transcription termination factor family protein~ unknown_gene~ fragment;original_location=join(1861093..1861674%2C1863061..1863155%2C1864476..1864722);owner=coffea | |
| 44096 chr10 manual_curation exon 9797131 9797841 . - . Parent=GSCOCT00031526001 | |
| 44097 chr10 manual_curation exon 9795650 9795744 . - . Parent=GSCOCT00031526001 | |
| 44098 chr10 manual_curation exon 9794083 9794329 . - . Parent=GSCOCT00031526001 | |
| 44099 chr10 manual_curation CDS 9797131 9797712 . - 0 Parent=GSCOCT00031526001 | |
| 44100 chr10 manual_curation CDS 9795650 9795744 . - 0 Parent=GSCOCT00031526001 | |
| 44101 chr10 manual_curation CDS 9794083 9794329 . - 2 Parent=GSCOCT00031526001 | |
| 44102 chr10 manual_curation gene 9826190 9827951 . + . ID=GSCOCG00031525001;Name=Cc10_g09580 | |
| 44103 chr10 manual_curation mRNA 9826190 9827951 . + . ID=GSCOCT00031525001;Parent=GSCOCG00031525001;Name=Cc10_g09580 | |
| 44104 chr10 manual_curation polypeptide 9826431 9827712 . + . ID=GSCOCP00031525001;Dbxref=InterPro:IPR000010,PFAM:PF00031,TrEMBL:G4Y628;Derives_from=GSCOCT00031525001;Name=Cc10_g09580;Ontology_term=CC_evidence_code:ISS,GO:0004869,CC_EC_number:missing_EC_number,PRODUCT:Putative Cysteine proteinase inhibitor CPI-4,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031525001~ Putative Cysteine proteinase inhibitor CPI-4~ unknown_gene~ modules;original_location=complement(join(1832320..1832374%2C1832052..1832176%2C1831093..1831392));owner=coffea | |
| 44105 chr10 manual_curation exon 9827413 9827951 . + . Parent=GSCOCT00031525001 | |
| 44106 chr10 manual_curation exon 9826629 9826753 . + . Parent=GSCOCT00031525001 | |
| 44107 chr10 manual_curation exon 9826190 9826485 . + . Parent=GSCOCT00031525001 | |
| 44108 chr10 manual_curation CDS 9827413 9827712 . + 0 Parent=GSCOCT00031525001 | |
| 44109 chr10 manual_curation CDS 9826629 9826753 . + 1 Parent=GSCOCT00031525001 | |
| 44110 chr10 manual_curation CDS 9826431 9826485 . + 0 Parent=GSCOCT00031525001 | |
| 44111 chr10 manual_curation gene 9840591 9842333 . + . ID=GSCOCG00031523001;Name=Cc10_g09590 | |
| 44112 chr10 manual_curation mRNA 9840591 9842333 . + . ID=GSCOCT00031523001;Parent=GSCOCG00031523001;Name=Cc10_g09590 | |
| 44113 chr10 manual_curation polypeptide 9841103 9842333 . + . ID=GSCOCP00031523001;Derives_from=GSCOCT00031523001;Name=Cc10_g09590;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031523001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1817648..1817702%2C1817391..1817515%2C1816472..1816771));owner=coffea | |
| 44114 chr10 manual_curation exon 9842034 9842333 . + . Parent=GSCOCT00031523001 | |
| 44115 chr10 manual_curation exon 9841290 9841414 . + . Parent=GSCOCT00031523001 | |
| 44116 chr10 manual_curation exon 9840591 9841157 . + . Parent=GSCOCT00031523001 | |
| 44117 chr10 manual_curation CDS 9842034 9842333 . + 0 Parent=GSCOCT00031523001 | |
| 44118 chr10 manual_curation CDS 9841290 9841414 . + 1 Parent=GSCOCT00031523001 | |
| 44119 chr10 manual_curation CDS 9841103 9841157 . + 0 Parent=GSCOCT00031523001 | |
| 44120 chr10 manual_curation gene 9847286 9851357 . - . ID=GSCOCG00031521001;Name=Cc10_g09600 | |
| 44121 chr10 manual_curation mRNA 9847286 9851357 . - . ID=GSCOCT00031521001;Parent=GSCOCG00031521001;Name=Cc10_g09600 | |
| 44122 chr10 manual_curation polypeptide 9847585 9851212 . - . ID=GSCOCP00031521001;Dbxref=InterPro:IPR002925,PFAM:PF01738,SwissProt:Q5RBU3,SwissProt:Q7TP52,SwissProt:Q96DG6,TAIR:AT1G35420.2,TrEMBL:A5AQS4,TrEMBL:B9IQE7,TrEMBL:D7U9D0;Derives_from=GSCOCT00031521001;Name=Cc10_g09600;Ontology_term=CC_evidence_code:ISS,GO:0016787,CC_EC_number:3.1.1.45,PRODUCT:Putative Carboxymethylenebutenolidase homolog,CC_functional_completeness:modules,CC_gene:CMBL,CC_gene:Cmbl;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031521001~ Putative Carboxymethylenebutenolidase homolog~ CMBL~ modules;original_location=join(1807593..1807718%2C1808699..1809036%2C1810695..1811220);owner=coffea | |
| 44123 chr10 manual_curation exon 9851087 9851357 . - . Parent=GSCOCT00031521001 | |
| 44124 chr10 manual_curation exon 9849769 9850106 . - . Parent=GSCOCT00031521001 | |
| 44125 chr10 manual_curation exon 9847286 9848110 . - . Parent=GSCOCT00031521001 | |
| 44126 chr10 manual_curation CDS 9851087 9851212 . - 0 Parent=GSCOCT00031521001 | |
| 44127 chr10 manual_curation CDS 9849769 9850106 . - 0 Parent=GSCOCT00031521001 | |
| 44128 chr10 manual_curation CDS 9847585 9848110 . - 2 Parent=GSCOCT00031521001 | |
| 44129 chr10 manual_curation gene 9851591 9854460 . - . ID=GSCOCG00031520001;Name=Cc10_g09610 | |
| 44130 chr10 manual_curation mRNA 9851591 9854460 . - . ID=GSCOCT00031520001;Parent=GSCOCG00031520001;Name=Cc10_g09610 | |
| 44131 chr10 manual_curation polypeptide 9852289 9854363 . - . ID=GSCOCP00031520001;Dbxref=InterPro:IPR000915,InterPro:IPR005568,PANTHER:PTHR10715,PFAM:PF01159,PFAM:PF03868,PROSITE:PS01170,SwissProt:P34091,SwissProt:Q9C9C5,SwissProt:Q9C9C6,TAIR:AT1G18540.1,TAIR:AT1G74050.1,TAIR:AT1G74060.1,TrEMBL:B7FH28,TrEMBL:B9SFN3,TrEMBL:G7J9R6;Derives_from=GSCOCT00031520001;Name=Cc10_g09610;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:60S ribosomal protein L6,CC_functional_completeness:complete,CC_gene:RPL6,CC_gene:RPL6C,CC_gene:RPL6B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031520001~ 60S ribosomal protein L6~ RPL6~ complete;original_location=join(1804442..1804698%2C1804799..1804905%2C1806062..1806243%2C1806361..1806516);owner=coffea | |
| 44132 chr10 manual_curation exon 9854107 9854460 . - . Parent=GSCOCT00031520001 | |
| 44133 chr10 manual_curation exon 9853900 9854006 . - . Parent=GSCOCT00031520001 | |
| 44134 chr10 manual_curation exon 9852562 9852743 . - . Parent=GSCOCT00031520001 | |
| 44135 chr10 manual_curation exon 9851591 9852444 . - . Parent=GSCOCT00031520001 | |
| 44136 chr10 manual_curation CDS 9854107 9854363 . - 0 Parent=GSCOCT00031520001 | |
| 44137 chr10 manual_curation CDS 9853900 9854006 . - 2 Parent=GSCOCT00031520001 | |
| 44138 chr10 manual_curation CDS 9852562 9852743 . - 1 Parent=GSCOCT00031520001 | |
| 44139 chr10 manual_curation CDS 9852289 9852444 . - 0 Parent=GSCOCT00031520001 | |
| 44140 chr10 manual_curation gene 9903798 9906091 . - . ID=GSCOCG00031519001;Name=Cc10_g09620 | |
| 44141 chr10 manual_curation mRNA 9903798 9906091 . - . ID=GSCOCT00031519001;Parent=GSCOCG00031519001;Name=Cc10_g09620 | |
| 44142 chr10 manual_curation polypeptide 9904045 9906004 . - . ID=GSCOCP00031519001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:Q50EK0,SwissProt:Q50EK1,SwissProt:Q8W4T9,TAIR:AT2G42850.1,TAIR:AT5G36110.1,TAIR:AT5G36140.1,TrEMBL:B9MWD9,TrEMBL:B9MWE0,TrEMBL:D7U959;Derives_from=GSCOCT00031519001;Name=Cc10_g09620;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.77,PRODUCT:Putative Cytochrome P450 716B2,CC_functional_completeness:complete,CC_gene:CYP716B2,CC_gene:CYP716B1,CC_gene:CYP725A2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031519001~ Putative Cytochrome P450 716B2~ CYP716B2~ complete;original_location=join(1752801..1753746%2C1754029..1754216%2C1754446..1754760);owner=coffea | |
| 44143 chr10 manual_curation exon 9905059 9906091 . - . Parent=GSCOCT00031519001 | |
| 44144 chr10 manual_curation exon 9904589 9904776 . - . Parent=GSCOCT00031519001 | |
| 44145 chr10 manual_curation exon 9903798 9904359 . - . Parent=GSCOCT00031519001 | |
| 44146 chr10 manual_curation CDS 9905059 9906004 . - 0 Parent=GSCOCT00031519001 | |
| 44147 chr10 manual_curation CDS 9904589 9904776 . - 1 Parent=GSCOCT00031519001 | |
| 44148 chr10 manual_curation CDS 9904045 9904359 . - 0 Parent=GSCOCT00031519001 | |
| 44149 chr10 manual_curation gene 9922975 9925337 . + . ID=GSCOCG00031518001;Name=Cc10_g09630 | |
| 44150 chr10 manual_curation mRNA 9922975 9925337 . + . ID=GSCOCT00031518001;Parent=GSCOCG00031518001;Name=Cc10_g09630 | |
| 44151 chr10 manual_curation polypeptide 9922975 9925076 . + . ID=GSCOCP00031518001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:Q50EK0,SwissProt:Q50EK1,SwissProt:Q8W4T9,TAIR:AT2G42850.1,TAIR:AT3G19270.1,TAIR:AT5G36110.1,TrEMBL:B9MWD9,TrEMBL:B9MWE0,TrEMBL:D7U959;Derives_from=GSCOCT00031518001;Name=Cc10_g09630;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.77,PRODUCT:Putative Cytochrome P450 716B2,CC_functional_completeness:complete,CC_gene:CYP716B2,CC_gene:CYP716B1,CC_gene:CYP725A2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031518001~ Putative Cytochrome P450 716B2~ CYP716B2~ complete;original_location=complement(join(1734885..1735830%2C1734253..1734440%2C1733729..1734028));owner=coffea | |
| 44152 chr10 manual_curation exon 9924777 9925337 . + . Parent=GSCOCT00031518001 | |
| 44153 chr10 manual_curation exon 9924365 9924552 . + . Parent=GSCOCT00031518001 | |
| 44154 chr10 manual_curation exon 9922975 9923920 . + . Parent=GSCOCT00031518001 | |
| 44155 chr10 manual_curation CDS 9924777 9925076 . + 0 Parent=GSCOCT00031518001 | |
| 44156 chr10 manual_curation CDS 9924365 9924552 . + 1 Parent=GSCOCT00031518001 | |
| 44157 chr10 manual_curation CDS 9922975 9923920 . + 0 Parent=GSCOCT00031518001 | |
| 44158 chr10 manual_curation gene 9929788 9930880 . - . ID=GSCOCG00031517001;Name=Cc10_g09640 | |
| 44159 chr10 manual_curation mRNA 9929788 9930880 . - . ID=GSCOCT00031517001;Parent=GSCOCG00031517001;Name=Cc10_g09640 | |
| 44160 chr10 manual_curation polypeptide 9929788 9930880 . - . ID=GSCOCP00031517001;Dbxref=InterPro:IPR000795,PFAM:PF00009,SwissProt:B0JU67,SwissProt:P57997,SwissProt:Q9SHI1,TAIR:AT1G17220.1,TAIR:AT1G21160.1,TAIR:AT4G11160.1,TrEMBL:A5B2X2,TrEMBL:B9T3K8,TrEMBL:F6H4W1;Derives_from=GSCOCT00031517001;Name=Cc10_g09640;Ontology_term=CC_evidence_code:ISS,GO:0003924,GO:0005525,CC_EC_number:missing_EC_number,PRODUCT:Translation initiation factor IF-2%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:IF2CP,CC_gene:At1g17220,CC_gene:infB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031517001~ Translation initiation factor IF-2%2C chloroplastic~ IF2CP~ fragment;original_location=join(1727925..1727948%2C1728198..1728230%2C1728469..1728478%2C1728562..1728668%2C1728847..1729017);owner=coffea | |
| 44161 chr10 manual_curation exon 9930857 9930880 . - . Parent=GSCOCT00031517001 | |
| 44162 chr10 manual_curation exon 9930575 9930607 . - . Parent=GSCOCT00031517001 | |
| 44163 chr10 manual_curation exon 9930327 9930336 . - . Parent=GSCOCT00031517001 | |
| 44164 chr10 manual_curation exon 9930137 9930243 . - . Parent=GSCOCT00031517001 | |
| 44165 chr10 manual_curation exon 9929788 9929958 . - . Parent=GSCOCT00031517001 | |
| 44166 chr10 manual_curation CDS 9930857 9930880 . - 0 Parent=GSCOCT00031517001 | |
| 44167 chr10 manual_curation CDS 9930575 9930607 . - 0 Parent=GSCOCT00031517001 | |
| 44168 chr10 manual_curation CDS 9930327 9930336 . - 0 Parent=GSCOCT00031517001 | |
| 44169 chr10 manual_curation CDS 9930137 9930243 . - 1 Parent=GSCOCT00031517001 | |
| 44170 chr10 manual_curation CDS 9929788 9929958 . - 0 Parent=GSCOCT00031517001 | |
| 44171 chr10 manual_curation gene 9941712 9944515 . + . ID=GSCOCG00031516001;Name=Cc10_g09650 | |
| 44172 chr10 manual_curation mRNA 9941712 9944515 . + . ID=GSCOCT00031516001;Parent=GSCOCG00031516001;Name=Cc10_g09650 | |
| 44173 chr10 manual_curation polypeptide 9942745 9944230 . + . ID=GSCOCP00031516001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:Q50EK0,SwissProt:Q50EK1,SwissProt:Q8W4T9,TAIR:AT2G42850.1,TAIR:AT5G36110.1,TAIR:AT5G36130.1,TrEMBL:F1T282,TrEMBL:F6H9N6,TrEMBL:F6I460;Derives_from=GSCOCT00031516001;Name=Cc10_g09650;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.77,PRODUCT:Cytochrome P450 716B2,CC_functional_completeness:fragment,CC_gene:CYP716B2,CC_gene:CYP716B1,CC_gene:CYP725A2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031516001~ Cytochrome P450 716B2~ CYP716B2~ fragment;original_location=complement(join(1715895..1716060%2C1714980..1715167%2C1714575..1714874));owner=coffea | |
| 44174 chr10 manual_curation exon 9943931 9944515 . + . Parent=GSCOCT00031516001 | |
| 44175 chr10 manual_curation exon 9943638 9943825 . + . Parent=GSCOCT00031516001 | |
| 44176 chr10 manual_curation exon 9941712 9942910 . + . Parent=GSCOCT00031516001 | |
| 44177 chr10 manual_curation CDS 9943931 9944230 . + 0 Parent=GSCOCT00031516001 | |
| 44178 chr10 manual_curation CDS 9943638 9943825 . + 1 Parent=GSCOCT00031516001 | |
| 44179 chr10 manual_curation CDS 9942745 9942910 . + 0 Parent=GSCOCT00031516001 | |
| 44180 chr10 manual_curation gene 9946467 9953481 . - . ID=GSCOCG00031515001;Name=Cc10_g09660 | |
| 44181 chr10 manual_curation mRNA 9946467 9953481 . - . ID=GSCOCT00031515001;Parent=GSCOCG00031515001;Name=Cc10_g09660 | |
| 44182 chr10 manual_curation polypeptide 9947199 9953300 . - . ID=GSCOCP00031515001;Dbxref=InterPro:IPR007512,PANTHER:PTHR21304,PFAM:PF04418,TAIR:AT1G22520.2,TAIR:AT1G72170.1,TrEMBL:B8AN69,TrEMBL:C5WT22,TrEMBL:I1PH78;Derives_from=GSCOCT00031515001;Name=Cc10_g09660;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of unknown function DUF543,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031515001~ Putative Protein of unknown function DUF543~ unknown_gene~ complete;original_location=join(1705505..1705694%2C1708460..1708599%2C1711592..1711606);owner=coffea | |
| 44183 chr10 manual_curation exon 9953111 9953481 . - . Parent=GSCOCT00031515001 | |
| 44184 chr10 manual_curation exon 9950206 9950345 . - . Parent=GSCOCT00031515001 | |
| 44185 chr10 manual_curation exon 9946467 9947213 . - . Parent=GSCOCT00031515001 | |
| 44186 chr10 manual_curation CDS 9953111 9953300 . - 0 Parent=GSCOCT00031515001 | |
| 44187 chr10 manual_curation CDS 9950206 9950345 . - 1 Parent=GSCOCT00031515001 | |
| 44188 chr10 manual_curation CDS 9947199 9947213 . - 0 Parent=GSCOCT00031515001 | |
| 44189 chr10 manual_curation gene 9977304 9978906 . + . ID=GSCOCG00031514001;Name=Cc10_g09670 | |
| 44190 chr10 manual_curation mRNA 9977304 9978906 . + . ID=GSCOCT00031514001;Parent=GSCOCG00031514001;Name=Cc10_g09670 | |
| 44191 chr10 manual_curation polypeptide 9977304 9978906 . + . ID=GSCOCP00031514001;Dbxref=InterPro:IPR000109,InterPro:IPR016196,PFAM:PF00854,SUPERFAMILY:SSF103473,SwissProt:Q0WP01,SwissProt:Q9C7U1,SwissProt:Q9SK96,TAIR:AT1G22540.1,TAIR:AT1G22550.1,TAIR:AT1G72140.1,TrEMBL:B9MWD3,TrEMBL:B9MWD6,TrEMBL:F6I3Z1;Derives_from=GSCOCT00031514001;Name=Cc10_g09670;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006857,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable peptide/nitrate transporter At1g22540,CC_functional_completeness:fragment,CC_gene:At1g22540,CC_gene:At1g22550,CC_gene:At1g72140;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031514001~ Putative Probable peptide/nitrate transporter At1g22540~ At1g22540~ fragment;original_location=complement(join(1681288..1681501%2C1680991..1681070%2C1680635..1680720%2C1679899..1680580));owner=coffea | |
| 44192 chr10 manual_curation exon 9978225 9978906 . + . Parent=GSCOCT00031514001 | |
| 44193 chr10 manual_curation exon 9978085 9978170 . + . Parent=GSCOCT00031514001 | |
| 44194 chr10 manual_curation exon 9977735 9977814 . + . Parent=GSCOCT00031514001 | |
| 44195 chr10 manual_curation exon 9977304 9977517 . + . Parent=GSCOCT00031514001 | |
| 44196 chr10 manual_curation CDS 9978225 9978906 . + 2 Parent=GSCOCT00031514001 | |
| 44197 chr10 manual_curation CDS 9978085 9978170 . + 0 Parent=GSCOCT00031514001 | |
| 44198 chr10 manual_curation CDS 9977735 9977814 . + 1 Parent=GSCOCT00031514001 | |
| 44199 chr10 manual_curation CDS 9977304 9977517 . + 0 Parent=GSCOCT00031514001 | |
| 44200 chr10 manual_curation gene 9981344 9982795 . + . ID=GSCOCG00031513001;Name=Cc10_g09680 | |
| 44201 chr10 manual_curation mRNA 9981344 9982795 . + . ID=GSCOCT00031513001;Parent=GSCOCG00031513001;Name=Cc10_g09680 | |
| 44202 chr10 manual_curation polypeptide 9981344 9982795 . + . ID=GSCOCP00031513001;Dbxref=InterPro:IPR021099,PFAM:PF11955,TAIR:AT1G71850.1,TAIR:AT3G58520.1,TAIR:AT4G24320.1,TrEMBL:A5BJQ8,TrEMBL:B9MW57,TrEMBL:F6HYS7;Derives_from=GSCOCT00031513001;Name=Cc10_g09680;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Ubiquitin carboxyl-terminal hydrolase family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031513001~ Ubiquitin carboxyl-terminal hydrolase family protein~ unknown_gene~ complete;original_location=complement(1676010..1677461);owner=coffea | |
| 44203 chr10 manual_curation exon 9981344 9982795 . + . Parent=GSCOCT00031513001 | |
| 44204 chr10 manual_curation CDS 9981344 9982795 . + 0 Parent=GSCOCT00031513001 | |
| 44205 chr10 manual_curation gene 9993491 9996501 . - . ID=GSCOCG00031512001;Name=Cc10_g09690 | |
| 44206 chr10 manual_curation mRNA 9993491 9996501 . - . ID=GSCOCT00031512001;Parent=GSCOCG00031512001;Name=Cc10_g09690 | |
| 44207 chr10 manual_curation polypeptide 9993967 9996203 . - . ID=GSCOCP00031512001;Dbxref=GENE3D:G3DSA:3.40.525.10,InterPro:IPR001071,InterPro:IPR001251,InterPro:IPR008273,InterPro:IPR009038,InterPro:IPR011074,PFAM:PF00650,PFAM:PF03765,PRINTS:PR00180,PROFILE:PS50191,PROFILE:PS50866,SMART:SM00516,SUPERFAMILY:SSF46938,SUPERFAMILY:SSF52087,SwissProt:Q56Z59,SwissProt:Q56ZI2,SwissProt:Q9M0R2,TAIR:AT1G22530.1,TAIR:AT1G72160.1,TAIR:AT4G09160.1,TrEMBL:B9N5A9,TrEMBL:B9SHD9,TrEMBL:Q2Q0V7;Derives_from=GSCOCT00031512001;Name=Cc10_g09690;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0005622,GO:0006810,CC_EC_number:missing_EC_number,PRODUCT:Patellin 1,CC_functional_completeness:complete,CC_gene:PATL5,CC_gene:PATL3,CC_gene:PATL2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031512001~ Patellin 1~ PATL5~ complete;original_location=join(1662602..1663945%2C1664104..1664228%2C1664343..1664484%2C1664587..1664838);owner=coffea | |
| 44208 chr10 manual_curation exon 9994860 9996501 . - . Parent=GSCOCT00031512001 | |
| 44209 chr10 manual_curation exon 9994577 9994701 . - . Parent=GSCOCT00031512001 | |
| 44210 chr10 manual_curation exon 9994321 9994462 . - . Parent=GSCOCT00031512001 | |
| 44211 chr10 manual_curation exon 9993491 9994218 . - . Parent=GSCOCT00031512001 | |
| 44212 chr10 manual_curation CDS 9994860 9996203 . - 0 Parent=GSCOCT00031512001 | |
| 44213 chr10 manual_curation CDS 9994577 9994701 . - 0 Parent=GSCOCT00031512001 | |
| 44214 chr10 manual_curation CDS 9994321 9994462 . - 2 Parent=GSCOCT00031512001 | |
| 44215 chr10 manual_curation CDS 9993967 9994218 . - 0 Parent=GSCOCT00031512001 | |
| 44216 chr10 manual_curation gene 10012984 10021199 . - . ID=GSCOCG00031511001;Name=Cc10_g09700 | |
| 44217 chr10 manual_curation mRNA 10012984 10021199 . - . ID=GSCOCT00031511001;Parent=GSCOCG00031511001;Name=Cc10_g09700 | |
| 44218 chr10 manual_curation polypeptide 10013859 10021199 . - . ID=GSCOCP00031511001;Dbxref=InterPro:IPR000109,InterPro:IPR016196,PFAM:PF00854,SUPERFAMILY:SSF103473,SwissProt:Q0WP01,SwissProt:Q8VZE2,SwissProt:Q9SK96,TAIR:AT1G22540.1,TAIR:AT1G22550.1,TAIR:AT1G72120.1,TrEMBL:B9MWD3,TrEMBL:D7KLS9,TrEMBL:F6I3Z1;Derives_from=GSCOCT00031511001;Name=Cc10_g09700;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006857,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable peptide/nitrate transporter At1g22540,CC_functional_completeness:complete,CC_gene:At1g22540,CC_gene:At1g22550,CC_gene:At1g72120;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031511001~ Putative Probable peptide/nitrate transporter At1g22540~ At1g22540~ complete;original_location=join(1637606..1637729%2C1637909..1638126%2C1638238..1638267%2C1638401..1638858%2C1639253..1639319%2C1639381..1640163%2C1640372..1640524%2C1641858..1641925%2C1642764..1642936%2C1643116..1643140%2C1643209..1643332%2C1643415..1643780%2C1643821..1643843%2C1644085..1644946);owner=coffea | |
| 44219 chr10 manual_curation exon 10021076 10021199 . - . Parent=GSCOCT00031511001 | |
| 44220 chr10 manual_curation exon 10020679 10020896 . - . Parent=GSCOCT00031511001 | |
| 44221 chr10 manual_curation exon 10020538 10020567 . - . Parent=GSCOCT00031511001 | |
| 44222 chr10 manual_curation exon 10019947 10020404 . - . Parent=GSCOCT00031511001 | |
| 44223 chr10 manual_curation exon 10019486 10019552 . - . Parent=GSCOCT00031511001 | |
| 44224 chr10 manual_curation exon 10018642 10019424 . - . Parent=GSCOCT00031511001 | |
| 44225 chr10 manual_curation exon 10018281 10018433 . - . Parent=GSCOCT00031511001 | |
| 44226 chr10 manual_curation exon 10016880 10016947 . - . Parent=GSCOCT00031511001 | |
| 44227 chr10 manual_curation exon 10015869 10016041 . - . Parent=GSCOCT00031511001 | |
| 44228 chr10 manual_curation exon 10015665 10015689 . - . Parent=GSCOCT00031511001 | |
| 44229 chr10 manual_curation exon 10015473 10015596 . - . Parent=GSCOCT00031511001 | |
| 44230 chr10 manual_curation exon 10015025 10015390 . - . Parent=GSCOCT00031511001 | |
| 44231 chr10 manual_curation exon 10014962 10014984 . - . Parent=GSCOCT00031511001 | |
| 44232 chr10 manual_curation exon 10012984 10014720 . - . Parent=GSCOCT00031511001 | |
| 44233 chr10 manual_curation CDS 10021076 10021199 . - 0 Parent=GSCOCT00031511001 | |
| 44234 chr10 manual_curation CDS 10020679 10020896 . - 1 Parent=GSCOCT00031511001 | |
| 44235 chr10 manual_curation CDS 10020538 10020567 . - 0 Parent=GSCOCT00031511001 | |
| 44236 chr10 manual_curation CDS 10019947 10020404 . - 0 Parent=GSCOCT00031511001 | |
| 44237 chr10 manual_curation CDS 10019486 10019552 . - 2 Parent=GSCOCT00031511001 | |
| 44238 chr10 manual_curation CDS 10018642 10019424 . - 0 Parent=GSCOCT00031511001 | |
| 44239 chr10 manual_curation CDS 10018281 10018433 . - 0 Parent=GSCOCT00031511001 | |
| 44240 chr10 manual_curation CDS 10016880 10016947 . - 0 Parent=GSCOCT00031511001 | |
| 44241 chr10 manual_curation CDS 10015869 10016041 . - 2 Parent=GSCOCT00031511001 | |
| 44242 chr10 manual_curation CDS 10015665 10015689 . - 1 Parent=GSCOCT00031511001 | |
| 44243 chr10 manual_curation CDS 10015473 10015596 . - 2 Parent=GSCOCT00031511001 | |
| 44244 chr10 manual_curation CDS 10015025 10015390 . - 0 Parent=GSCOCT00031511001 | |
| 44245 chr10 manual_curation CDS 10014962 10014984 . - 0 Parent=GSCOCT00031511001 | |
| 44246 chr10 manual_curation CDS 10013859 10014720 . - 2 Parent=GSCOCT00031511001 | |
| 44247 chr10 manual_curation gene 10030110 10036531 . - . ID=GSCOCG00031509001;Name=Cc10_g09710 | |
| 44248 chr10 manual_curation mRNA 10030110 10036531 . - . ID=GSCOCT00031509001;Parent=GSCOCG00031509001;Name=Cc10_g09710 | |
| 44249 chr10 manual_curation polypeptide 10030110 10036531 . - . ID=GSCOCP00031509001;Dbxref=InterPro:IPR000109,InterPro:IPR016196,PFAM:PF00854,SUPERFAMILY:SSF103473,SwissProt:Q0WP01,SwissProt:Q0WSZ6,SwissProt:Q8VZE2,TAIR:AT1G22540.1,TAIR:AT1G72120.1,TAIR:AT1G72125.1,TrEMBL:A5CBH4,TrEMBL:D7U9B6,TrEMBL:F6I403;Derives_from=GSCOCT00031509001;Name=Cc10_g09710;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006857,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable peptide/nitrate transporter At1g72125,CC_functional_completeness:fragment,CC_gene:At1g72125,CC_gene:At1g22540,CC_gene:At1g72120;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031509001~ Putative Probable peptide/nitrate transporter At1g72125~ At1g72125~ fragment;original_location=join(1622274..1622606%2C1626085..1626151%2C1626340..1626358%2C1626562..1626602%2C1626699..1626746%2C1626990..1627404%2C1627793..1627919%2C1628372..1628695);owner=coffea | |
| 44250 chr10 manual_curation exon 10036199 10036531 . - . Parent=GSCOCT00031509001 | |
| 44251 chr10 manual_curation exon 10032654 10032720 . - . Parent=GSCOCT00031509001 | |
| 44252 chr10 manual_curation exon 10032447 10032465 . - . Parent=GSCOCT00031509001 | |
| 44253 chr10 manual_curation exon 10032203 10032243 . - . Parent=GSCOCT00031509001 | |
| 44254 chr10 manual_curation exon 10032059 10032106 . - . Parent=GSCOCT00031509001 | |
| 44255 chr10 manual_curation exon 10031401 10031815 . - . Parent=GSCOCT00031509001 | |
| 44256 chr10 manual_curation exon 10030886 10031012 . - . Parent=GSCOCT00031509001 | |
| 44257 chr10 manual_curation exon 10030110 10030433 . - . Parent=GSCOCT00031509001 | |
| 44258 chr10 manual_curation CDS 10036199 10036531 . - 0 Parent=GSCOCT00031509001 | |
| 44259 chr10 manual_curation CDS 10032654 10032720 . - 0 Parent=GSCOCT00031509001 | |
| 44260 chr10 manual_curation CDS 10032447 10032465 . - 1 Parent=GSCOCT00031509001 | |
| 44261 chr10 manual_curation CDS 10032203 10032243 . - 2 Parent=GSCOCT00031509001 | |
| 44262 chr10 manual_curation CDS 10032059 10032106 . - 1 Parent=GSCOCT00031509001 | |
| 44263 chr10 manual_curation CDS 10031401 10031815 . - 1 Parent=GSCOCT00031509001 | |
| 44264 chr10 manual_curation CDS 10030886 10031012 . - 2 Parent=GSCOCT00031509001 | |
| 44265 chr10 manual_curation CDS 10030110 10030433 . - 0 Parent=GSCOCT00031509001 | |
| 44266 chr10 manual_curation gene 10036626 10038734 . - . ID=GSCOCG00031508001;Name=Cc10_g09720 | |
| 44267 chr10 manual_curation mRNA 10036626 10038734 . - . ID=GSCOCT00031508001;Parent=GSCOCG00031508001;Name=Cc10_g09720 | |
| 44268 chr10 manual_curation polypeptide 10036666 10038734 . - . ID=GSCOCP00031508001;Dbxref=InterPro:IPR000109,InterPro:IPR016196,PFAM:PF00854,SUPERFAMILY:SSF103473,SwissProt:Q0WP01,SwissProt:Q0WSZ6,SwissProt:Q8VZE2,TAIR:AT1G22540.1,TAIR:AT1G72120.1,TAIR:AT1G72125.1,TrEMBL:D7KLS9,TrEMBL:D7U9B6,TrEMBL:I1LNN9;Derives_from=GSCOCT00031508001;Name=Cc10_g09720;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006857,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable peptide/nitrate transporter At1g22540,CC_functional_completeness:fragment,CC_gene:At1g22540,CC_gene:At1g72120,CC_gene:At1g72125;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031508001~ Putative Probable peptide/nitrate transporter At1g22540~ At1g22540~ fragment;original_location=join(1620071..1620167%2C1620350..1620567%2C1620778..1621186%2C1621265..1621334%2C1621827..1622139);owner=coffea | |
| 44269 chr10 manual_curation exon 10038638 10038734 . - . Parent=GSCOCT00031508001 | |
| 44270 chr10 manual_curation exon 10038238 10038455 . - . Parent=GSCOCT00031508001 | |
| 44271 chr10 manual_curation exon 10037619 10038027 . - . Parent=GSCOCT00031508001 | |
| 44272 chr10 manual_curation exon 10037471 10037540 . - . Parent=GSCOCT00031508001 | |
| 44273 chr10 manual_curation exon 10036626 10036978 . - . Parent=GSCOCT00031508001 | |
| 44274 chr10 manual_curation CDS 10038638 10038734 . - 0 Parent=GSCOCT00031508001 | |
| 44275 chr10 manual_curation CDS 10038238 10038455 . - 1 Parent=GSCOCT00031508001 | |
| 44276 chr10 manual_curation CDS 10037619 10038027 . - 0 Parent=GSCOCT00031508001 | |
| 44277 chr10 manual_curation CDS 10037471 10037540 . - 1 Parent=GSCOCT00031508001 | |
| 44278 chr10 manual_curation CDS 10036666 10036978 . - 2 Parent=GSCOCT00031508001 | |
| 44279 chr10 manual_curation gene 10044677 10045180 . - . ID=GSCOCG00031507001;Name=Cc10_g09730 | |
| 44280 chr10 manual_curation mRNA 10044677 10045180 . - . ID=GSCOCT00031507001;Parent=GSCOCG00031507001;Name=Cc10_g09730 | |
| 44281 chr10 manual_curation polypeptide 10044677 10045180 . - . ID=GSCOCP00031507001;Dbxref=SwissProt:Q0WP01,SwissProt:Q8RX67,SwissProt:Q9C7U1,TAIR:AT1G22540.1,TAIR:AT1G72130.1,TAIR:AT1G72140.1,TrEMBL:A6YJX5,TrEMBL:B9IQF2,TrEMBL:D7U9B6;Derives_from=GSCOCT00031507001;Name=Cc10_g09730;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Probable peptide/nitrate transporter At1g22540,CC_functional_completeness:fragment,CC_gene:At1g22540,CC_gene:At1g72140,CC_gene:At1g72130;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031507001~ Probable peptide/nitrate transporter At1g22540~ At1g22540~ fragment;original_location=join(1613625..1613678%2C1613850..1614128);owner=coffea | |
| 44282 chr10 manual_curation exon 10045127 10045180 . - . Parent=GSCOCT00031507001 | |
| 44283 chr10 manual_curation exon 10044677 10044955 . - . Parent=GSCOCT00031507001 | |
| 44284 chr10 manual_curation CDS 10045127 10045180 . - 0 Parent=GSCOCT00031507001 | |
| 44285 chr10 manual_curation CDS 10044677 10044955 . - 0 Parent=GSCOCT00031507001 | |
| 44286 chr10 manual_curation gene 10057910 10059521 . - . ID=GSCOCG00031506001;Name=Cc10_g09740 | |
| 44287 chr10 manual_curation mRNA 10057910 10059521 . - . ID=GSCOCT00031506001;Parent=GSCOCG00031506001;Name=Cc10_g09740 | |
| 44288 chr10 manual_curation polypeptide 10057910 10059521 . - . ID=GSCOCP00031506001;Dbxref=InterPro:IPR000109,PFAM:PF00854,SwissProt:Q0WP01,SwissProt:Q0WSZ6,SwissProt:Q8VZE2,TAIR:AT1G22540.1,TAIR:AT1G72120.1,TAIR:AT1G72125.1,TrEMBL:D7U9B0,TrEMBL:F6I400,TrEMBL:I1LNN9;Derives_from=GSCOCT00031506001;Name=Cc10_g09740;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006857,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:At1g72125,CC_gene:At1g22540,CC_gene:At1g72120;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031506001~ Hypothetical protein~ At1g72125~ missing_functional_completeness;original_location=join(1599284..1599523%2C1599641..1599750%2C1599844..1600395%2C1600634..1600657%2C1600745..1600895);owner=coffea | |
| 44289 chr10 manual_curation exon 10059282 10059521 . - . Parent=GSCOCT00031506001 | |
| 44290 chr10 manual_curation exon 10059055 10059164 . - . Parent=GSCOCT00031506001 | |
| 44291 chr10 manual_curation exon 10058410 10058961 . - . Parent=GSCOCT00031506001 | |
| 44292 chr10 manual_curation exon 10058148 10058171 . - . Parent=GSCOCT00031506001 | |
| 44293 chr10 manual_curation exon 10057910 10058060 . - . Parent=GSCOCT00031506001 | |
| 44294 chr10 manual_curation CDS 10059282 10059521 . - 0 Parent=GSCOCT00031506001 | |
| 44295 chr10 manual_curation CDS 10059055 10059164 . - 0 Parent=GSCOCT00031506001 | |
| 44296 chr10 manual_curation CDS 10058410 10058961 . - 2 Parent=GSCOCT00031506001 | |
| 44297 chr10 manual_curation CDS 10058148 10058171 . - 2 Parent=GSCOCT00031506001 | |
| 44298 chr10 manual_curation CDS 10057910 10058060 . - 2 Parent=GSCOCT00031506001 | |
| 44299 chr10 manual_curation gene 10081595 10085787 . - . ID=GSCOCG00031505001;Name=Cc10_g09750 | |
| 44300 chr10 manual_curation mRNA 10081595 10085787 . - . ID=GSCOCT00031505001;Parent=GSCOCG00031505001;Name=Cc10_g09750 | |
| 44301 chr10 manual_curation polypeptide 10081595 10085347 . - . ID=GSCOCP00031505001;Dbxref=InterPro:IPR000109,InterPro:IPR016196,PFAM:PF00854,SUPERFAMILY:SSF103473,SwissProt:Q0WP01,SwissProt:Q9SK96,SwissProt:Q9SK99,TAIR:AT1G22540.1,TAIR:AT1G22550.1,TAIR:AT1G22570.1,TrEMBL:A5C8T7,TrEMBL:A5CBH4,TrEMBL:F6I400;Derives_from=GSCOCT00031505001;Name=Cc10_g09750;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006857,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Probable peptide/nitrate transporter At1g22540,CC_functional_completeness:complete,CC_gene:At1g22540,CC_gene:At1g22550,CC_gene:At1g22570;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031505001~ Probable peptide/nitrate transporter At1g22540~ At1g22540~ complete;original_location=join(1573458..1573599%2C1573834..1574051%2C1574122..1574660%2C1576185..1576927%2C1577053..1577210);owner=coffea | |
| 44302 chr10 manual_curation exon 10085206 10085787 . - . Parent=GSCOCT00031505001 | |
| 44303 chr10 manual_curation exon 10084754 10084971 . - . Parent=GSCOCT00031505001 | |
| 44304 chr10 manual_curation exon 10084145 10084683 . - . Parent=GSCOCT00031505001 | |
| 44305 chr10 manual_curation exon 10081878 10082620 . - . Parent=GSCOCT00031505001 | |
| 44306 chr10 manual_curation exon 10081595 10081752 . - . Parent=GSCOCT00031505001 | |
| 44307 chr10 manual_curation CDS 10085206 10085347 . - 0 Parent=GSCOCT00031505001 | |
| 44308 chr10 manual_curation CDS 10084754 10084971 . - 1 Parent=GSCOCT00031505001 | |
| 44309 chr10 manual_curation CDS 10084145 10084683 . - 0 Parent=GSCOCT00031505001 | |
| 44310 chr10 manual_curation CDS 10081878 10082620 . - 2 Parent=GSCOCT00031505001 | |
| 44311 chr10 manual_curation CDS 10081595 10081752 . - 1 Parent=GSCOCT00031505001 | |
| 44312 chr10 manual_curation gene 10095059 10100521 . - . ID=GSCOCG00031503001;Name=Cc10_g09760 | |
| 44313 chr10 manual_curation mRNA 10095059 10100521 . - . ID=GSCOCT00031503001;Parent=GSCOCG00031503001;Name=Cc10_g09760 | |
| 44314 chr10 manual_curation polypeptide 10095739 10100268 . - . ID=GSCOCP00031503001;Dbxref=InterPro:IPR000109,InterPro:IPR016196,PFAM:PF00854,SUPERFAMILY:SSF103473,SwissProt:Q0WP01,SwissProt:Q0WSZ6,SwissProt:Q8VZE2,TAIR:AT1G22540.1,TAIR:AT1G72120.1,TAIR:AT1G72125.1,TrEMBL:D7U9B0,TrEMBL:F6I3Z2,TrEMBL:F6I400;Derives_from=GSCOCT00031503001;Name=Cc10_g09760;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006857,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable peptide/nitrate transporter At1g22540,CC_functional_completeness:complete,CC_gene:At1g22540,CC_gene:At1g72125,CC_gene:At1g72120;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031503001~ Putative Probable peptide/nitrate transporter At1g22540~ At1g22540~ complete;original_location=join(1558537..1558696%2C1559170..1559387%2C1561563..1562035%2C1562229..1562715%2C1562791..1563066);owner=coffea | |
| 44315 chr10 manual_curation exon 10100109 10100521 . - . Parent=GSCOCT00031503001 | |
| 44316 chr10 manual_curation exon 10099418 10099635 . - . Parent=GSCOCT00031503001 | |
| 44317 chr10 manual_curation exon 10096770 10097242 . - . Parent=GSCOCT00031503001 | |
| 44318 chr10 manual_curation exon 10096090 10096576 . - . Parent=GSCOCT00031503001 | |
| 44319 chr10 manual_curation exon 10095059 10096014 . - . Parent=GSCOCT00031503001 | |
| 44320 chr10 manual_curation CDS 10100109 10100268 . - 0 Parent=GSCOCT00031503001 | |
| 44321 chr10 manual_curation CDS 10099418 10099635 . - 1 Parent=GSCOCT00031503001 | |
| 44322 chr10 manual_curation CDS 10096770 10097242 . - 0 Parent=GSCOCT00031503001 | |
| 44323 chr10 manual_curation CDS 10096090 10096576 . - 2 Parent=GSCOCT00031503001 | |
| 44324 chr10 manual_curation CDS 10095739 10096014 . - 0 Parent=GSCOCT00031503001 | |
| 44325 chr10 manual_curation gene 10105332 10106431 . - . ID=GSCOCG00031502001;Name=Cc10_g09770 | |
| 44326 chr10 manual_curation mRNA 10105332 10106431 . - . ID=GSCOCT00031502001;Parent=GSCOCG00031502001;Name=Cc10_g09770 | |
| 44327 chr10 manual_curation polypeptide 10105332 10106431 . - . ID=GSCOCP00031502001;Dbxref=SwissProt:Q9C7U1,SwissProt:Q9SK96,SwissProt:Q9SK99,TAIR:AT1G22550.1,TAIR:AT1G22570.1,TAIR:AT1G72140.1,TrEMBL:B9IQF1,TrEMBL:B9S740,TrEMBL:D7KZA0;Derives_from=GSCOCT00031502001;Name=Cc10_g09770;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable peptide/nitrate transporter At1g22570,CC_functional_completeness:fragment,CC_gene:At1g22570,CC_gene:At1g22550,CC_gene:At1g72140;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031502001~ Putative Probable peptide/nitrate transporter At1g22570~ At1g22570~ fragment;original_location=join(1552374..1552458%2C1552820..1552864%2C1553298..1553473);owner=coffea | |
| 44328 chr10 manual_curation exon 10106347 10106431 . - . Parent=GSCOCT00031502001 | |
| 44329 chr10 manual_curation exon 10105941 10105985 . - . Parent=GSCOCT00031502001 | |
| 44330 chr10 manual_curation exon 10105332 10105507 . - . Parent=GSCOCT00031502001 | |
| 44331 chr10 manual_curation CDS 10106347 10106431 . - 0 Parent=GSCOCT00031502001 | |
| 44332 chr10 manual_curation CDS 10105941 10105985 . - 1 Parent=GSCOCT00031502001 | |
| 44333 chr10 manual_curation CDS 10105332 10105507 . - 1 Parent=GSCOCT00031502001 | |
| 44334 chr10 manual_curation gene 10108936 10109749 . - . ID=GSCOCG00031501001;Name=Cc10_g09780 | |
| 44335 chr10 manual_curation mRNA 10108936 10109749 . - . ID=GSCOCT00031501001;Parent=GSCOCG00031501001;Name=Cc10_g09780 | |
| 44336 chr10 manual_curation polypeptide 10108936 10109749 . - . ID=GSCOCP00031501001;Dbxref=SwissProt:Q0WP01,SwissProt:Q9SK96,SwissProt:Q9SK99,TAIR:AT1G22540.1,TAIR:AT1G22550.1,TAIR:AT1G22570.1,TrEMBL:B9MWD7,TrEMBL:B9NGE2,TrEMBL:F6I3Z4;Derives_from=GSCOCT00031501001;Name=Cc10_g09780;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable peptide/nitrate transporter At1g22570,CC_functional_completeness:fragment,CC_gene:At1g22570,CC_gene:At1g22550,CC_gene:At1g22540;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031501001~ Putative Probable peptide/nitrate transporter At1g22570~ At1g22570~ fragment;original_location=join(1549056..1549222%2C1549683..1549869);owner=coffea | |
| 44337 chr10 manual_curation exon 10109583 10109749 . - . Parent=GSCOCT00031501001 | |
| 44338 chr10 manual_curation exon 10108936 10109122 . - . Parent=GSCOCT00031501001 | |
| 44339 chr10 manual_curation CDS 10109583 10109749 . - 0 Parent=GSCOCT00031501001 | |
| 44340 chr10 manual_curation CDS 10108936 10109122 . - 2 Parent=GSCOCT00031501001 | |
| 44341 chr10 manual_curation gene 10167167 10168353 . - . ID=GSCOCG00031499001;Name=Cc10_g09790 | |
| 44342 chr10 manual_curation mRNA 10167167 10168353 . - . ID=GSCOCT00031499001;Parent=GSCOCG00031499001;Name=Cc10_g09790 | |
| 44343 chr10 manual_curation polypeptide 10167361 10168285 . - . ID=GSCOCP00031499001;Dbxref=GENE3D:G3DSA:2.60.120.10,InterPro:IPR001929,InterPro:IPR006045,InterPro:IPR011051,InterPro:IPR014710,InterPro:IPR019780,PFAM:PF00190,PRINTS:PR00325,PROSITE:PS00725,SMART:SM00835,SUPERFAMILY:SSF51182,SwissProt:Q6K5Q0,SwissProt:Q9FID0,SwissProt:Q9SFF9,TAIR:AT3G05950.1,TAIR:AT5G39110.1,TAIR:AT5G39150.1,TrEMBL:D7TSZ0,TrEMBL:F6HSP3,TrEMBL:F6HSP7;Derives_from=GSCOCT00031499001;Name=Cc10_g09790;Ontology_term=CC_evidence_code:ISS,GO:0030145,GO:0045735,GO:0048046,CC_EC_number:1.2.3.4,PRODUCT:Putative germin-like protein 2-1,CC_functional_completeness:complete,CC_gene:Os02g0491600,CC_gene:At3g05950,CC_gene:At5g39110;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031499001~ Putative germin-like protein 2-1~ Os02g0491600~ complete;original_location=join(1490520..1490640%2C1490873..1491444);owner=coffea | |
| 44344 chr10 manual_curation exon 10168165 10168353 . - . Parent=GSCOCT00031499001 | |
| 44345 chr10 manual_curation exon 10167167 10167932 . - . Parent=GSCOCT00031499001 | |
| 44346 chr10 manual_curation CDS 10168165 10168285 . - 0 Parent=GSCOCT00031499001 | |
| 44347 chr10 manual_curation CDS 10167361 10167932 . - 1 Parent=GSCOCT00031499001 | |
| 44348 chr10 manual_curation gene 10213966 10214435 . - . ID=GSCOCG00031498001;Name=Cc10_g09800 | |
| 44349 chr10 manual_curation mRNA 10213966 10214435 . - . ID=GSCOCT00031498001;Parent=GSCOCG00031498001;Name=Cc10_g09800 | |
| 44350 chr10 manual_curation polypeptide 10213966 10214435 . - . ID=GSCOCP00031498001;Dbxref=GENE3D:G3DSA:2.60.120.10,InterPro:IPR014710;Derives_from=GSCOCT00031498001;Name=Cc10_g09800;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031498001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(1444370..1444456%2C1444669..1444839);owner=coffea | |
| 44351 chr10 manual_curation exon 10214349 10214435 . - . Parent=GSCOCT00031498001 | |
| 44352 chr10 manual_curation exon 10213966 10214136 . - . Parent=GSCOCT00031498001 | |
| 44353 chr10 manual_curation CDS 10214349 10214435 . - 0 Parent=GSCOCT00031498001 | |
| 44354 chr10 manual_curation CDS 10213966 10214136 . - 0 Parent=GSCOCT00031498001 | |
| 44355 chr10 manual_curation gene 10237527 10237754 . + . ID=GSCOCG00031497001;Name=Cc10_g09810 | |
| 44356 chr10 manual_curation mRNA 10237527 10237754 . + . ID=GSCOCT00031497001;Parent=GSCOCG00031497001;Name=Cc10_g09810 | |
| 44357 chr10 manual_curation polypeptide 10237527 10237754 . + . ID=GSCOCP00031497001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR001976,InterPro:IPR012677,PANTHER:PTHR10496,PFAM:PF01282,PRODOM:PD006052,SwissProt:Q8LC83,SwissProt:Q962Q6,TAIR:AT5G28060.1,TrEMBL:A5BH65,TrEMBL:A9PBL6,TrEMBL:B9RWY8,TrEMBL:C6TAW2,TrEMBL:D7TDY2;Derives_from=GSCOCT00031497001;Name=Cc10_g09810;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:40S ribosomal protein S24-2,CC_functional_completeness:fragment,CC_gene:RPS24B,CC_gene:RPS24A,CC_gene:RpS24;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031497001~ 40S ribosomal protein S24-2~ RPS24B~ fragment;original_location=complement(1421051..1421278);owner=coffea | |
| 44358 chr10 manual_curation exon 10237527 10237754 . + . Parent=GSCOCT00031497001 | |
| 44359 chr10 manual_curation CDS 10237527 10237754 . + 0 Parent=GSCOCT00031497001 | |
| 44360 chr10 manual_curation gene 10239155 10240248 . - . ID=GSCOCG00031496001;Name=Cc10_g09820 | |
| 44361 chr10 manual_curation mRNA 10239155 10240248 . - . ID=GSCOCT00031496001;Parent=GSCOCG00031496001;Name=Cc10_g09820 | |
| 44362 chr10 manual_curation polypeptide 10239302 10240193 . - . ID=GSCOCP00031496001;Dbxref=GENE3D:G3DSA:2.60.120.10,InterPro:IPR001929,InterPro:IPR006045,InterPro:IPR011051,InterPro:IPR014710,InterPro:IPR019780,PFAM:PF00190,PRINTS:PR00325,PROSITE:PS00725,SMART:SM00835,SUPERFAMILY:SSF51182,SwissProt:P92996,SwissProt:P92997,SwissProt:Q9FID0,TAIR:AT5G39110.1,TAIR:AT5G39130.1,TAIR:AT5G39190.1,TrEMBL:D7TSZ0,TrEMBL:F6HSP3,TrEMBL:F6HSP7;Derives_from=GSCOCT00031496001;Name=Cc10_g09820;Ontology_term=CC_evidence_code:ISS,GO:0030145,GO:0045735,GO:0048046,CC_EC_number:1.2.3.4,PRODUCT:Germin-like protein subfamily 1 member 14,CC_functional_completeness:complete,CC_gene:At5g39110,CC_gene:GLP6,CC_gene:GLP5A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031496001~ Germin-like protein subfamily 1 member 14~ At5g39110~ complete;original_location=join(1418612..1418732%2C1418953..1419503);owner=coffea | |
| 44363 chr10 manual_curation exon 10240073 10240248 . - . Parent=GSCOCT00031496001 | |
| 44364 chr10 manual_curation exon 10239155 10239852 . - . Parent=GSCOCT00031496001 | |
| 44365 chr10 manual_curation CDS 10240073 10240193 . - 0 Parent=GSCOCT00031496001 | |
| 44366 chr10 manual_curation CDS 10239302 10239852 . - 1 Parent=GSCOCT00031496001 | |
| 44367 chr10 manual_curation gene 10261653 10262386 . - . ID=GSCOCG00031494001;Name=Cc10_g09830 | |
| 44368 chr10 manual_curation mRNA 10261653 10262386 . - . ID=GSCOCT00031494001;Parent=GSCOCG00031494001;Name=Cc10_g09830 | |
| 44369 chr10 manual_curation polypeptide 10261743 10262386 . - . ID=GSCOCP00031494001;Dbxref=InterPro:IPR007122,PANTHER:PTHR11977,SwissProt:O81644,SwissProt:O81645,TAIR:AT2G41740.1,TAIR:AT3G57410.1,TAIR:AT4G30160.2,TrEMBL:B9H9T9,TrEMBL:B9II82,TrEMBL:D7THV1;Derives_from=GSCOCT00031494001;Name=Cc10_g09830;Ontology_term=CC_evidence_code:ISS,GO:0003779,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:VLN3,CC_gene:VLN2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031494001~ Hypothetical protein~ VLN3~ missing_functional_completeness;original_location=join(1396419..1396441%2C1396632..1396682%2C1396903..1397062);owner=coffea | |
| 44370 chr10 manual_curation exon 10262364 10262386 . - . Parent=GSCOCT00031494001 | |
| 44371 chr10 manual_curation exon 10262123 10262173 . - . Parent=GSCOCT00031494001 | |
| 44372 chr10 manual_curation exon 10261653 10261902 . - . Parent=GSCOCT00031494001 | |
| 44373 chr10 manual_curation CDS 10262364 10262386 . - 0 Parent=GSCOCT00031494001 | |
| 44374 chr10 manual_curation CDS 10262123 10262173 . - 2 Parent=GSCOCT00031494001 | |
| 44375 chr10 manual_curation CDS 10261743 10261902 . - 2 Parent=GSCOCT00031494001 | |
| 44376 chr10 manual_curation gene 10279865 10280122 . + . ID=GSCOCG00031492001;Name=Cc10_g09840 | |
| 44377 chr10 manual_curation mRNA 10279865 10280122 . + . ID=GSCOCT00031492001;Parent=GSCOCG00031492001;Name=Cc10_g09840 | |
| 44378 chr10 manual_curation polypeptide 10279865 10280122 . + . ID=GSCOCP00031492001;Dbxref=GENE3D:G3DSA:2.60.120.10,InterPro:IPR001929,InterPro:IPR006045,InterPro:IPR011051,InterPro:IPR014710,PFAM:PF00190,PRINTS:PR00325,SUPERFAMILY:SSF51182,SwissProt:Q6K5P8,SwissProt:Q6K5P9,SwissProt:Q6K5Q0,TAIR:AT3G05950.1,TAIR:AT5G38930.1,TAIR:AT5G38940.1,TrEMBL:C5XRU7,TrEMBL:F6HSP5,TrEMBL:F6HSP7;Derives_from=GSCOCT00031492001;Name=Cc10_g09840;Ontology_term=CC_evidence_code:ISS,GO:0030145,GO:0045735,GO:0048046,CC_EC_number:1.2.3.4,PRODUCT:Putative germin-like protein 2-1,CC_functional_completeness:fragment,CC_gene:Os02g0491600,CC_gene:Os02g0491700,CC_gene:Os02g0491800;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031492001~ Putative germin-like protein 2-1~ Os02g0491600~ fragment;original_location=complement(1378683..1378940);owner=coffea | |
| 44379 chr10 manual_curation exon 10279865 10280122 . + . Parent=GSCOCT00031492001 | |
| 44380 chr10 manual_curation CDS 10279865 10280122 . + 0 Parent=GSCOCT00031492001 | |
| 44381 chr10 manual_curation gene 10283016 10284150 . - . ID=GSCOCG00031491001;Name=Cc10_g09850 | |
| 44382 chr10 manual_curation mRNA 10283016 10284150 . - . ID=GSCOCT00031491001;Parent=GSCOCG00031491001;Name=Cc10_g09850 | |
| 44383 chr10 manual_curation polypeptide 10283191 10284082 . - . ID=GSCOCP00031491001;Dbxref=GENE3D:G3DSA:2.60.120.10,InterPro:IPR001929,InterPro:IPR006045,InterPro:IPR011051,InterPro:IPR014710,InterPro:IPR019780,PFAM:PF00190,PRINTS:PR00325,PROSITE:PS00725,SMART:SM00835,SUPERFAMILY:SSF51182,SwissProt:Q6K5Q0,SwissProt:Q9FID0,SwissProt:Q9SFF9,TAIR:AT3G05950.1,TAIR:AT5G39110.1,TAIR:AT5G39150.1,TrEMBL:D7TSZ0,TrEMBL:F6HSP5,TrEMBL:F6HSP7;Derives_from=GSCOCT00031491001;Name=Cc10_g09850;Ontology_term=CC_evidence_code:ISS,GO:0030145,GO:0045735,GO:0048046,CC_EC_number:1.2.3.4,PRODUCT:Putative germin-like protein 2-1,CC_functional_completeness:complete,CC_gene:Os02g0491600,CC_gene:At3g05950,CC_gene:At5g39110;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031491001~ Putative germin-like protein 2-1~ Os02g0491600~ complete;original_location=join(1374723..1374843%2C1375064..1375614);owner=coffea | |
| 44384 chr10 manual_curation exon 10283962 10284150 . - . Parent=GSCOCT00031491001 | |
| 44385 chr10 manual_curation exon 10283016 10283741 . - . Parent=GSCOCT00031491001 | |
| 44386 chr10 manual_curation CDS 10283962 10284082 . - 0 Parent=GSCOCT00031491001 | |
| 44387 chr10 manual_curation CDS 10283191 10283741 . - 1 Parent=GSCOCT00031491001 | |
| 44388 chr10 manual_curation gene 10344620 10345730 . - . ID=GSCOCG00031490001;Name=Cc10_g09860 | |
| 44389 chr10 manual_curation mRNA 10344620 10345730 . - . ID=GSCOCT00031490001;Parent=GSCOCG00031490001;Name=Cc10_g09860 | |
| 44390 chr10 manual_curation polypeptide 10344779 10345675 . - . ID=GSCOCP00031490001;Dbxref=GENE3D:G3DSA:2.60.120.10,InterPro:IPR001929,InterPro:IPR006045,InterPro:IPR011051,InterPro:IPR014710,InterPro:IPR019780,PFAM:PF00190,PRINTS:PR00325,PROSITE:PS00725,SMART:SM00835,SUPERFAMILY:SSF51182,SwissProt:P92997,SwissProt:Q6K5Q0,SwissProt:Q9SFF9,TAIR:AT3G05950.1,TAIR:AT5G38910.1,TAIR:AT5G39110.1,TrEMBL:B9T166,TrEMBL:D7TSZ0,TrEMBL:F6HSP7;Derives_from=GSCOCT00031490001;Name=Cc10_g09860;Ontology_term=CC_evidence_code:ISS,GO:0030145,GO:0045735,GO:0048046,CC_EC_number:1.2.3.4,PRODUCT:Putative germin-like protein 2-1,CC_functional_completeness:complete,CC_gene:Os02g0491600,CC_gene:At3g05950,CC_gene:GLP6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031490001~ Putative germin-like protein 2-1~ Os02g0491600~ complete;original_location=join(1313130..1313250%2C1313473..1314026);owner=coffea | |
| 44391 chr10 manual_curation exon 10345555 10345730 . - . Parent=GSCOCT00031490001 | |
| 44392 chr10 manual_curation exon 10344620 10345332 . - . Parent=GSCOCT00031490001 | |
| 44393 chr10 manual_curation CDS 10345555 10345675 . - 0 Parent=GSCOCT00031490001 | |
| 44394 chr10 manual_curation CDS 10344779 10345332 . - 1 Parent=GSCOCT00031490001 | |
| 44395 chr10 manual_curation gene 10389449 10390566 . - . ID=GSCOCG00031489001;Name=Cc10_g09870 | |
| 44396 chr10 manual_curation mRNA 10389449 10390566 . - . ID=GSCOCT00031489001;Parent=GSCOCG00031489001;Name=Cc10_g09870 | |
| 44397 chr10 manual_curation polypeptide 10389608 10390472 . - . ID=GSCOCP00031489001;Dbxref=GENE3D:G3DSA:2.60.120.10,InterPro:IPR001929,InterPro:IPR006045,InterPro:IPR011051,InterPro:IPR014710,InterPro:IPR019780,PFAM:PF00190,PRINTS:PR00325,PROSITE:PS00725,SMART:SM00835,SUPERFAMILY:SSF51182,SwissProt:P92997,SwissProt:Q6K5Q0,SwissProt:Q9SFF9,TAIR:AT3G05950.1,TAIR:AT5G39110.1,TAIR:AT5G39150.1,TrEMBL:B9T166,TrEMBL:D7TSZ0,TrEMBL:F6HSP5;Derives_from=GSCOCT00031489001;Name=Cc10_g09870;Ontology_term=CC_evidence_code:ISS,GO:0030145,GO:0045735,GO:0048046,CC_EC_number:1.2.3.4,PRODUCT:Germin-like protein subfamily 1 member 7,CC_functional_completeness:complete,CC_gene:At3g05950,CC_gene:Os02g0491600,CC_gene:GLP6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031489001~ Germin-like protein subfamily 1 member 7~ At3g05950~ complete;original_location=join(1268333..1268420%2C1268626..1269197);owner=coffea | |
| 44398 chr10 manual_curation exon 10390385 10390566 . - . Parent=GSCOCT00031489001 | |
| 44399 chr10 manual_curation exon 10389449 10390179 . - . Parent=GSCOCT00031489001 | |
| 44400 chr10 manual_curation CDS 10390385 10390472 . - 0 Parent=GSCOCT00031489001 | |
| 44401 chr10 manual_curation CDS 10389608 10390179 . - 1 Parent=GSCOCT00031489001 | |
| 44402 chr10 manual_curation gene 10395407 10395667 . - . ID=GSCOCG00031488001;Name=Cc10_g09880 | |
| 44403 chr10 manual_curation mRNA 10395407 10395667 . - . ID=GSCOCT00031488001;Parent=GSCOCG00031488001;Name=Cc10_g09880 | |
| 44404 chr10 manual_curation polypeptide 10395407 10395667 . - . ID=GSCOCP00031488001;Dbxref=GENE3D:G3DSA:2.60.120.10,InterPro:IPR001929,InterPro:IPR006045,InterPro:IPR011051,InterPro:IPR014710,PFAM:PF00190,PRINTS:PR00325,SUPERFAMILY:SSF51182,SwissProt:Q2QXJ4,SwissProt:Q6K5P9,SwissProt:Q6K5Q0,TAIR:AT3G05950.1,TAIR:AT5G38930.1,TAIR:AT5G39150.1,TrEMBL:B9I5S8,TrEMBL:B9I5S9,TrEMBL:B9NCV3;Derives_from=GSCOCT00031488001;Name=Cc10_g09880;Ontology_term=CC_evidence_code:ISS,GO:0030145,GO:0045735,GO:0048046,CC_EC_number:1.2.3.4,PRODUCT:Putative germin-like protein 2-1,CC_functional_completeness:fragment,CC_gene:Os02g0491600,CC_gene:Os02g0491700,CC_gene:Os12g0154700;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031488001~ Putative germin-like protein 2-1~ Os02g0491600~ fragment;original_location=1263138..1263398;owner=coffea | |
| 44405 chr10 manual_curation exon 10395407 10395667 . - . Parent=GSCOCT00031488001 | |
| 44406 chr10 manual_curation CDS 10395407 10395667 . - 0 Parent=GSCOCT00031488001 | |
| 44407 chr10 manual_curation gene 10421821 10423182 . - . ID=GSCOCG00031487001;Name=Cc10_g09890 | |
| 44408 chr10 manual_curation mRNA 10421821 10423182 . - . ID=GSCOCT00031487001;Parent=GSCOCG00031487001;Name=Cc10_g09890 | |
| 44409 chr10 manual_curation polypeptide 10421821 10423182 . - . ID=GSCOCP00031487001;Dbxref=InterPro:IPR005828,InterPro:IPR005829,InterPro:IPR016196,InterPro:IPR020846,PFAM:PF00083,PROFILE:PS50850,PROSITE:PS00217,SUPERFAMILY:SSF103473,SwissProt:O23492,SwissProt:Q9C757,SwissProt:Q9ZQP6,TAIR:AT1G30220.1,TAIR:AT2G35740.1,TAIR:AT4G16480.1,TrEMBL:I1L247,TrEMBL:Q7XQ00,TrEMBL:Q8W545;Derives_from=GSCOCT00031487001;Name=Cc10_g09890;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006810,GO:0016020,GO:0016021,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:INT3,CC_gene:INT4,CC_gene:INT2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031487001~ Hypothetical protein~ INT3~ missing_functional_completeness;original_location=join(1235623..1235647%2C1235809..1235879%2C1235981..1236348%2C1236801..1236984);owner=coffea | |
| 44410 chr10 manual_curation exon 10423158 10423182 . - . Parent=GSCOCT00031487001 | |
| 44411 chr10 manual_curation exon 10422926 10422996 . - . Parent=GSCOCT00031487001 | |
| 44412 chr10 manual_curation exon 10422457 10422824 . - . Parent=GSCOCT00031487001 | |
| 44413 chr10 manual_curation exon 10421821 10422004 . - . Parent=GSCOCT00031487001 | |
| 44414 chr10 manual_curation CDS 10423158 10423182 . - 0 Parent=GSCOCT00031487001 | |
| 44415 chr10 manual_curation CDS 10422926 10422996 . - 1 Parent=GSCOCT00031487001 | |
| 44416 chr10 manual_curation CDS 10422457 10422824 . - 0 Parent=GSCOCT00031487001 | |
| 44417 chr10 manual_curation CDS 10421821 10422004 . - 2 Parent=GSCOCT00031487001 | |
| 44418 chr10 manual_curation gene 10429398 10431090 . - . ID=GSCOCG00031486001;Name=Cc10_g09900 | |
| 44419 chr10 manual_curation mRNA 10429398 10431090 . - . ID=GSCOCT00031486001;Parent=GSCOCG00031486001;Name=Cc10_g09900 | |
| 44420 chr10 manual_curation polypeptide 10430644 10431090 . - . ID=GSCOCP00031486001;Dbxref=SwissProt:P08770,TAIR:AT3G42170.1,TrEMBL:A5C993,TrEMBL:B9IMV0,TrEMBL:F6HXG0;Derives_from=GSCOCT00031486001;Name=Cc10_g09900;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative AC transposase,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031486001~ Putative AC transposase~ unknown_gene~ fragment;original_location=1227715..1228161;owner=coffea | |
| 44421 chr10 manual_curation exon 10429398 10431090 . - . Parent=GSCOCT00031486001 | |
| 44422 chr10 manual_curation CDS 10430644 10431090 . - 0 Parent=GSCOCT00031486001 | |
| 44423 chr10 manual_curation gene 10433087 10434124 . + . ID=GSCOCG00031484001;Name=Cc10_g09910 | |
| 44424 chr10 manual_curation mRNA 10433087 10434124 . + . ID=GSCOCT00031484001;Parent=GSCOCG00031484001;Name=Cc10_g09910 | |
| 44425 chr10 manual_curation polypeptide 10433087 10434124 . + . ID=GSCOCP00031484001;Dbxref=InterPro:IPR003608,InterPro:IPR016093,PFAM:PF02815,PROFILE:PS50919,SMART:SM00472,SUPERFAMILY:SSF82109,SwissProt:Q3SZ45,SwissProt:Q93ZE8,SwissProt:Q99470,TAIR:AT2G25110.1,TrEMBL:C6TJ58,TrEMBL:D7U863,TrEMBL:I1JU79;Derives_from=GSCOCT00031484001;Name=Cc10_g09910;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:2.4.1.109,PRODUCT:Stromal cell-derived factor 2-like protein,CC_functional_completeness:fragment,CC_gene:At2g25110,CC_gene:SDF2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031484001~ Stromal cell-derived factor 2-like protein~ At2g25110~ fragment;original_location=complement(join(1225620..1225718%2C1224945..1225085%2C1224681..1224863));owner=coffea | |
| 44426 chr10 manual_curation exon 10433942 10434124 . + . Parent=GSCOCT00031484001 | |
| 44427 chr10 manual_curation exon 10433720 10433860 . + . Parent=GSCOCT00031484001 | |
| 44428 chr10 manual_curation exon 10433087 10433185 . + . Parent=GSCOCT00031484001 | |
| 44429 chr10 manual_curation CDS 10433942 10434124 . + 0 Parent=GSCOCT00031484001 | |
| 44430 chr10 manual_curation CDS 10433720 10433860 . + 0 Parent=GSCOCT00031484001 | |
| 44431 chr10 manual_curation CDS 10433087 10433185 . + 0 Parent=GSCOCT00031484001 | |
| 44432 chr10 manual_curation gene 10547665 10551503 . - . ID=GSCOCG00031483001;Name=Cc10_g09920 | |
| 44433 chr10 manual_curation mRNA 10547665 10551503 . - . ID=GSCOCT00031483001;Parent=GSCOCG00031483001;Name=Cc10_g09920 | |
| 44434 chr10 manual_curation polypeptide 10548119 10551503 . - . ID=GSCOCP00031483001;Dbxref=InterPro:IPR000109,InterPro:IPR016196,InterPro:IPR018456,PFAM:PF00854,PROSITE:PS01022,SUPERFAMILY:SSF103473,SwissProt:Q0WP01,SwissProt:Q0WSZ6,SwissProt:Q9C7U1,TAIR:AT1G22540.1,TAIR:AT1G72125.1,TAIR:AT1G72140.1,TrEMBL:A5C8T7,TrEMBL:F6I3Z1,TrEMBL:F6I400;Derives_from=GSCOCT00031483001;Name=Cc10_g09920;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006857,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Probable peptide/nitrate transporter At1g22540,CC_functional_completeness:complete,CC_gene:At1g22540,CC_gene:At1g72125,CC_gene:At1g72140;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031483001~ Probable peptide/nitrate transporter At1g22540~ At1g22540~ complete;original_location=join(1107302..1107452%2C1107557..1107774%2C1108914..1109461%2C1109870..1110686);owner=coffea | |
| 44435 chr10 manual_curation exon 10551353 10551503 . - . Parent=GSCOCT00031483001 | |
| 44436 chr10 manual_curation exon 10551031 10551248 . - . Parent=GSCOCT00031483001 | |
| 44437 chr10 manual_curation exon 10549344 10549891 . - . Parent=GSCOCT00031483001 | |
| 44438 chr10 manual_curation exon 10547665 10548935 . - . Parent=GSCOCT00031483001 | |
| 44439 chr10 manual_curation CDS 10551353 10551503 . - 0 Parent=GSCOCT00031483001 | |
| 44440 chr10 manual_curation CDS 10551031 10551248 . - 1 Parent=GSCOCT00031483001 | |
| 44441 chr10 manual_curation CDS 10549344 10549891 . - 0 Parent=GSCOCT00031483001 | |
| 44442 chr10 manual_curation CDS 10548119 10548935 . - 2 Parent=GSCOCT00031483001 | |
| 44443 chr10 manual_curation gene 10556451 10562814 . - . ID=GSCOCG00031482001;Name=Cc10_g09930 | |
| 44444 chr10 manual_curation mRNA 10556451 10562814 . - . ID=GSCOCT00031482001;Parent=GSCOCG00031482001;Name=Cc10_g09930 | |
| 44445 chr10 manual_curation polypeptide 10556451 10562814 . - . ID=GSCOCP00031482001;Dbxref=InterPro:IPR000109,InterPro:IPR016196,InterPro:IPR018456,PFAM:PF00854,PROSITE:PS01022,SUPERFAMILY:SSF103473,SwissProt:Q0WP01,SwissProt:Q0WSZ6,SwissProt:Q9C7U1,TAIR:AT1G22540.1,TAIR:AT1G72125.1,TAIR:AT1G72140.1,TrEMBL:B9MWD3,TrEMBL:F6I3Z1,TrEMBL:F6I400;Derives_from=GSCOCT00031482001;Name=Cc10_g09930;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006857,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Probable peptide/nitrate transporter At1g22540,CC_functional_completeness:complete,CC_gene:At1g22540,CC_gene:At1g72125,CC_gene:At1g72140;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031482001~ Probable peptide/nitrate transporter At1g22540~ At1g22540~ complete;original_location=join(1095991..1096144%2C1096245..1096462%2C1100573..1101120%2C1101535..1102354);owner=coffea | |
| 44446 chr10 manual_curation exon 10562661 10562814 . - . Parent=GSCOCT00031482001 | |
| 44447 chr10 manual_curation exon 10562343 10562560 . - . Parent=GSCOCT00031482001 | |
| 44448 chr10 manual_curation exon 10557685 10558232 . - . Parent=GSCOCT00031482001 | |
| 44449 chr10 manual_curation exon 10556451 10557270 . - . Parent=GSCOCT00031482001 | |
| 44450 chr10 manual_curation CDS 10562661 10562814 . - 0 Parent=GSCOCT00031482001 | |
| 44451 chr10 manual_curation CDS 10562343 10562560 . - 1 Parent=GSCOCT00031482001 | |
| 44452 chr10 manual_curation CDS 10557685 10558232 . - 0 Parent=GSCOCT00031482001 | |
| 44453 chr10 manual_curation CDS 10556451 10557270 . - 2 Parent=GSCOCT00031482001 | |
| 44454 chr10 manual_curation gene 10569193 10571454 . + . ID=GSCOCG00031480001;Name=Cc10_g09940 | |
| 44455 chr10 manual_curation mRNA 10569193 10571454 . + . ID=GSCOCT00031480001;Parent=GSCOCG00031480001;Name=Cc10_g09940 | |
| 44456 chr10 manual_curation polypeptide 10569264 10571269 . + . ID=GSCOCP00031480001;Dbxref=InterPro:IPR001810,InterPro:IPR006566,InterPro:IPR013596,InterPro:IPR022364,PFAM:PF00646,PFAM:PF08387,PROFILE:PS50181,SMART:SM00256,SMART:SM00579,SUPERFAMILY:SSF81383,SwissProt:Q6DR13,SwissProt:Q9FZ52,SwissProt:Q9LXR6,TAIR:AT1G16930.1,TAIR:AT2G42720.1,TAIR:AT3G58860.1,TrEMBL:A5BLF6,TrEMBL:F6HR88,TrEMBL:G7KGV2;Derives_from=GSCOCT00031480001;Name=Cc10_g09940;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative F-box/FBD/LRR-repeat protein At1g16930,CC_functional_completeness:complete,CC_gene:At1g16930,CC_gene:At3g58860,CC_gene:At2g42720;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031480001~ Putative F-box/FBD/LRR-repeat protein At1g16930~ At1g16930~ complete;original_location=complement(join(1089410..1089541%2C1089063..1089276%2C1088287..1088951%2C1088140..1088187%2C1087536..1087997));owner=coffea | |
| 44457 chr10 manual_curation exon 10570808 10571454 . + . Parent=GSCOCT00031480001 | |
| 44458 chr10 manual_curation exon 10570618 10570665 . + . Parent=GSCOCT00031480001 | |
| 44459 chr10 manual_curation exon 10569854 10570518 . + . Parent=GSCOCT00031480001 | |
| 44460 chr10 manual_curation exon 10569529 10569742 . + . Parent=GSCOCT00031480001 | |
| 44461 chr10 manual_curation exon 10569193 10569395 . + . Parent=GSCOCT00031480001 | |
| 44462 chr10 manual_curation CDS 10570808 10571269 . + 0 Parent=GSCOCT00031480001 | |
| 44463 chr10 manual_curation CDS 10570618 10570665 . + 0 Parent=GSCOCT00031480001 | |
| 44464 chr10 manual_curation CDS 10569854 10570518 . + 1 Parent=GSCOCT00031480001 | |
| 44465 chr10 manual_curation CDS 10569529 10569742 . + 0 Parent=GSCOCT00031480001 | |
| 44466 chr10 manual_curation CDS 10569264 10569395 . + 0 Parent=GSCOCT00031480001 | |
| 44467 chr10 manual_curation gene 10571977 10573957 . - . ID=GSCOCG00031479001;Name=Cc10_g09950 | |
| 44468 chr10 manual_curation mRNA 10571977 10573957 . - . ID=GSCOCT00031479001;Parent=GSCOCG00031479001;Name=Cc10_g09950 | |
| 44469 chr10 manual_curation polypeptide 10571977 10573957 . - . ID=GSCOCP00031479001;Dbxref=InterPro:IPR000109,InterPro:IPR016196,PFAM:PF00854,SUPERFAMILY:SSF103473,SwissProt:Q0WP01,SwissProt:Q0WSZ6,SwissProt:Q9C7U1,TAIR:AT1G22540.1,TAIR:AT1G72125.1,TAIR:AT1G72140.1,TrEMBL:A5C8T7,TrEMBL:B9MWD3,TrEMBL:F6I3Z1;Derives_from=GSCOCT00031479001;Name=Cc10_g09950;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006857,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Probable peptide/nitrate transporter At1g22540,CC_functional_completeness:fragment,CC_gene:At1g22540,CC_gene:At1g72140,CC_gene:At1g72125;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031479001~ Probable peptide/nitrate transporter At1g22540~ At1g22540~ fragment;original_location=join(1084848..1085416%2C1086012..1086828);owner=coffea | |
| 44470 chr10 manual_curation exon 10573389 10573957 . - . Parent=GSCOCT00031479001 | |
| 44471 chr10 manual_curation exon 10571977 10572793 . - . Parent=GSCOCT00031479001 | |
| 44472 chr10 manual_curation CDS 10573389 10573957 . - 0 Parent=GSCOCT00031479001 | |
| 44473 chr10 manual_curation CDS 10571977 10572793 . - 2 Parent=GSCOCT00031479001 | |
| 44474 chr10 manual_curation gene 10577122 10579118 . - . ID=GSCOCG00031478001;Name=Cc10_g09960 | |
| 44475 chr10 manual_curation mRNA 10577122 10579118 . - . ID=GSCOCT00031478001;Parent=GSCOCG00031478001;Name=Cc10_g09960 | |
| 44476 chr10 manual_curation polypeptide 10577122 10579118 . - . ID=GSCOCP00031478001;Dbxref=SwissProt:Q0WP01,SwissProt:Q8VZE2,SwissProt:Q9SK99,TAIR:AT1G22540.1,TAIR:AT1G22570.1,TAIR:AT1G72120.1,TrEMBL:A6YJX5,TrEMBL:B9MWD6,TrEMBL:B9PD62;Derives_from=GSCOCT00031478001;Name=Cc10_g09960;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Predicted protein,CC_functional_completeness:modules,CC_gene:At1g22570,CC_gene:At1g22540,CC_gene:At1g72120;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031478001~ Predicted protein~ At1g22570~ modules;original_location=join(1079687..1079768%2C1081184..1081369%2C1081457..1081683);owner=coffea | |
| 44477 chr10 manual_curation exon 10579037 10579118 . - . Parent=GSCOCT00031478001 | |
| 44478 chr10 manual_curation exon 10577436 10577621 . - . Parent=GSCOCT00031478001 | |
| 44479 chr10 manual_curation exon 10577122 10577348 . - . Parent=GSCOCT00031478001 | |
| 44480 chr10 manual_curation CDS 10579037 10579118 . - 0 Parent=GSCOCT00031478001 | |
| 44481 chr10 manual_curation CDS 10577436 10577621 . - 1 Parent=GSCOCT00031478001 | |
| 44482 chr10 manual_curation CDS 10577122 10577348 . - 1 Parent=GSCOCT00031478001 | |
| 44483 chr10 manual_curation gene 10582866 10583966 . - . ID=GSCOCG00031477001;Name=Cc10_g09970 | |
| 44484 chr10 manual_curation mRNA 10582866 10583966 . - . ID=GSCOCT00031477001;Parent=GSCOCG00031477001;Name=Cc10_g09970 | |
| 44485 chr10 manual_curation polypeptide 10583002 10583966 . - . ID=GSCOCP00031477001;Dbxref=GENE3D:G3DSA:1.20.1050.10,GENE3D:G3DSA:3.40.30.10,InterPro:IPR004045,InterPro:IPR004046,InterPro:IPR010987,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR017933,PFAM:PF00043,PFAM:PF02798,PROFILE:PS50404,PROFILE:PS50405,SUPERFAMILY:SSF47616,SUPERFAMILY:SSF52833,SwissProt:P32110,SwissProt:Q9FQA3,SwissProt:Q9ZW24,TAIR:AT1G78380.1,TAIR:AT2G29420.1,TAIR:AT3G09270.1,TrEMBL:D2WL55,TrEMBL:D2X9S3,TrEMBL:Q5CCP3;Derives_from=GSCOCT00031477001;Name=Cc10_g09970;Ontology_term=CC_evidence_code:ISS,CC_EC_number:4.4.1.5,PRODUCT:Putative Glutathione transferase GST 23,CC_functional_completeness:complete,CC_gene:GSTU7,CC_gene:HSP26-A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031477001~ Putative Glutathione transferase GST 23~ GSTU7~ complete;original_location=join(1074839..1075150%2C1075444..1075803);owner=coffea | |
| 44486 chr10 manual_curation exon 10583655 10583966 . - . Parent=GSCOCT00031477001 | |
| 44487 chr10 manual_curation exon 10582866 10583361 . - . Parent=GSCOCT00031477001 | |
| 44488 chr10 manual_curation CDS 10583655 10583966 . - 0 Parent=GSCOCT00031477001 | |
| 44489 chr10 manual_curation CDS 10583002 10583361 . - 0 Parent=GSCOCT00031477001 | |
| 44490 chr10 manual_curation gene 10587958 10589745 . - . ID=GSCOCG00031475001;Name=Cc10_g09980 | |
| 44491 chr10 manual_curation mRNA 10587958 10589745 . - . ID=GSCOCT00031475001;Parent=GSCOCG00031475001;Name=Cc10_g09980 | |
| 44492 chr10 manual_curation polypeptide 10588189 10589065 . - . ID=GSCOCP00031475001;Dbxref=GENE3D:G3DSA:1.20.1050.10,GENE3D:G3DSA:3.40.30.10,InterPro:IPR004045,InterPro:IPR004046,InterPro:IPR010987,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR017933,PFAM:PF00043,PFAM:PF02798,PROFILE:PS50404,PROFILE:PS50405,SUPERFAMILY:SSF47616,SUPERFAMILY:SSF52833,SwissProt:P32110,SwissProt:Q9FQA3,SwissProt:Q9ZW24,TAIR:AT2G29420.1,TAIR:AT2G29460.1,TAIR:AT2G29490.1,TrEMBL:B9HKX9,TrEMBL:B9HKY0,TrEMBL:Q5CCP3;Derives_from=GSCOCT00031475001;Name=Cc10_g09980;Ontology_term=CC_evidence_code:ISS,CC_EC_number:4.4.1.5,PRODUCT:Putative Glutathione transferase GST 23,CC_functional_completeness:complete,CC_gene:GSTU7,CC_gene:HSP26-A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031475001~ Putative Glutathione transferase GST 23~ GSTU7~ complete;original_location=join(1069740..1070051%2C1070269..1070616);owner=coffea | |
| 44493 chr10 manual_curation exon 10588754 10589745 . - . Parent=GSCOCT00031475001 | |
| 44494 chr10 manual_curation exon 10587958 10588536 . - . Parent=GSCOCT00031475001 | |
| 44495 chr10 manual_curation CDS 10588754 10589065 . - 0 Parent=GSCOCT00031475001 | |
| 44496 chr10 manual_curation CDS 10588189 10588536 . - 0 Parent=GSCOCT00031475001 | |
| 44497 chr10 manual_curation gene 10590258 10591092 . - . ID=GSCOCG00031474001;Name=Cc10_g09990 | |
| 44498 chr10 manual_curation mRNA 10590258 10591092 . - . ID=GSCOCT00031474001;Parent=GSCOCG00031474001;Name=Cc10_g09990 | |
| 44499 chr10 manual_curation polypeptide 10590585 10590979 . - . ID=GSCOCP00031474001;Dbxref=SwissProt:Q0WP01,SwissProt:Q9SK96,SwissProt:Q9SK99,TAIR:AT1G22540.1,TAIR:AT1G22550.1,TAIR:AT1G22570.1,TrEMBL:B7FM70,TrEMBL:B9PD62,TrEMBL:G7IYA9;Derives_from=GSCOCT00031474001;Name=Cc10_g09990;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Probable peptide/nitrate transporter At1g22550,CC_functional_completeness:fragment,CC_gene:At1g22550,CC_gene:At1g22570,CC_gene:At1g22540;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031474001~ Probable peptide/nitrate transporter At1g22550~ At1g22550~ fragment;original_location=join(1067826..1067967%2C1068042..1068220);owner=coffea | |
| 44500 chr10 manual_curation exon 10590838 10591092 . - . Parent=GSCOCT00031474001 | |
| 44501 chr10 manual_curation exon 10590258 10590763 . - . Parent=GSCOCT00031474001 | |
| 44502 chr10 manual_curation CDS 10590838 10590979 . - 0 Parent=GSCOCT00031474001 | |
| 44503 chr10 manual_curation CDS 10590585 10590763 . - 1 Parent=GSCOCT00031474001 | |
| 44504 chr10 manual_curation gene 10593463 10594310 . + . ID=GSCOCG00031473001;Name=Cc10_g10000 | |
| 44505 chr10 manual_curation mRNA 10593463 10594310 . + . ID=GSCOCT00031473001;Parent=GSCOCG00031473001;Name=Cc10_g10000 | |
| 44506 chr10 manual_curation polypeptide 10593463 10594218 . + . ID=GSCOCP00031473001;Derives_from=GSCOCT00031473001;Name=Cc10_g10000;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031473001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1064820..1065342%2C1064587..1064720));owner=coffea | |
| 44507 chr10 manual_curation exon 10594085 10594310 . + . Parent=GSCOCT00031473001 | |
| 44508 chr10 manual_curation exon 10593463 10593985 . + . Parent=GSCOCT00031473001 | |
| 44509 chr10 manual_curation CDS 10594085 10594218 . + 1 Parent=GSCOCT00031473001 | |
| 44510 chr10 manual_curation CDS 10593463 10593985 . + 0 Parent=GSCOCT00031473001 | |
| 44511 chr10 manual_curation gene 10594975 10596888 . + . ID=GSCOCG00031472001;Name=Cc10_g10010 | |
| 44512 chr10 manual_curation mRNA 10594975 10596888 . + . ID=GSCOCT00031472001;Parent=GSCOCG00031472001;Name=Cc10_g10010 | |
| 44513 chr10 manual_curation polypeptide 10594975 10596888 . + . ID=GSCOCP00031472001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR020635,PFAM:PF07714,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q8RY67,SwissProt:Q9LZM4,SwissProt:Q9M342,TAIR:AT2G23450.2,TAIR:AT3G53840.1,TAIR:AT5G02070.1,TrEMBL:A5C0W3,TrEMBL:B9S095,TrEMBL:F6HKF2;Derives_from=GSCOCT00031472001;Name=Cc10_g10010;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Wall-associated receptor kinase-like 20,CC_functional_completeness:complete,CC_gene:WAKL20,CC_gene:WAKL15,CC_gene:WAKL14;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031472001~ Putative Wall-associated receptor kinase-like 20~ WAKL20~ complete;original_location=complement(1061917..1063830);owner=coffea | |
| 44514 chr10 manual_curation exon 10594975 10596888 . + . Parent=GSCOCT00031472001 | |
| 44515 chr10 manual_curation CDS 10594975 10596888 . + 0 Parent=GSCOCT00031472001 | |
| 44516 chr10 manual_curation gene 10660555 10664367 . + . ID=GSCOCG00031467001;Name=Cc10_g10020 | |
| 44517 chr10 manual_curation mRNA 10660555 10664367 . + . ID=GSCOCT00031467001;Parent=GSCOCG00031467001;Name=Cc10_g10020 | |
| 44518 chr10 manual_curation polypeptide 10660882 10664078 . + . ID=GSCOCP00031467001;Dbxref=GENE3D:G3DSA:4.10.280.10,InterPro:IPR001092,InterPro:IPR011598,PFAM:PF00010,PROFILE:PS50888,SMART:SM00353,SUPERFAMILY:SSF47459,SwissProt:Q9C690,SwissProt:Q9C8P8,SwissProt:Q9M0R0,TAIR:AT1G35460.1,TAIR:AT1G51140.1,TAIR:AT4G09180.1,TrEMBL:B9IQF4,TrEMBL:C7SBB7,TrEMBL:F6I3Y8;Derives_from=GSCOCT00031467001;Name=Cc10_g10020;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0030528,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Transcription factor bHLH80,CC_functional_completeness:complete,CC_gene:BHLH80,CC_gene:BHLH81,CC_gene:BHLH122;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031467001~ Transcription factor bHLH80~ BHLH80~ complete;original_location=complement(join(997866..997923%2C997408..997847%2C995666..995809%2C995372..995437%2C995014..995082%2C994727..994774));owner=coffea | |
| 44519 chr10 manual_curation exon 10664031 10664367 . + . Parent=GSCOCT00031467001 | |
| 44520 chr10 manual_curation exon 10663723 10663791 . + . Parent=GSCOCT00031467001 | |
| 44521 chr10 manual_curation exon 10663368 10663433 . + . Parent=GSCOCT00031467001 | |
| 44522 chr10 manual_curation exon 10662996 10663139 . + . Parent=GSCOCT00031467001 | |
| 44523 chr10 manual_curation exon 10660958 10661397 . + . Parent=GSCOCT00031467001 | |
| 44524 chr10 manual_curation exon 10660555 10660939 . + . Parent=GSCOCT00031467001 | |
| 44525 chr10 manual_curation CDS 10664031 10664078 . + 0 Parent=GSCOCT00031467001 | |
| 44526 chr10 manual_curation CDS 10663723 10663791 . + 0 Parent=GSCOCT00031467001 | |
| 44527 chr10 manual_curation CDS 10663368 10663433 . + 0 Parent=GSCOCT00031467001 | |
| 44528 chr10 manual_curation CDS 10662996 10663139 . + 0 Parent=GSCOCT00031467001 | |
| 44529 chr10 manual_curation CDS 10660958 10661397 . + 1 Parent=GSCOCT00031467001 | |
| 44530 chr10 manual_curation CDS 10660882 10660939 . + 0 Parent=GSCOCT00031467001 | |
| 44531 chr10 manual_curation gene 10665858 10667438 . - . ID=GSCOCG00031465001;Name=Cc10_g10030 | |
| 44532 chr10 manual_curation mRNA 10665858 10667438 . - . ID=GSCOCT00031465001;Parent=GSCOCG00031465001;Name=Cc10_g10030 | |
| 44533 chr10 manual_curation polypeptide 10665858 10667300 . - . ID=GSCOCP00031465001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,SwissProt:Q4R1I9,SwissProt:Q76MR7,SwissProt:Q9LK73,TAIR:AT1G01420.1,TAIR:AT3G16520.3,TAIR:AT4G01070.1,TrEMBL:D7URL5,TrEMBL:D7URL9,TrEMBL:F8WKX1;Derives_from=GSCOCT00031465001;Name=Cc10_g10030;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:Putative Anthocyanidin 5%2C3-O-glucosyltransferase,CC_functional_completeness:complete,CC_gene:RhGT1,CC_gene:UGT88A1,CC_gene:UBGAT-I;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031465001~ Putative Anthocyanidin 5%2C3-O-glucosyltransferase~ RhGT1~ complete;original_location=join(991505..991640%2C991722..992947);owner=coffea | |
| 44534 chr10 manual_curation exon 10667165 10667438 . - . Parent=GSCOCT00031465001 | |
| 44535 chr10 manual_curation exon 10665858 10667083 . - . Parent=GSCOCT00031465001 | |
| 44536 chr10 manual_curation CDS 10667165 10667300 . - 0 Parent=GSCOCT00031465001 | |
| 44537 chr10 manual_curation CDS 10665858 10667083 . - 1 Parent=GSCOCT00031465001 | |
| 44538 chr10 manual_curation gene 10672342 10674870 . - . ID=GSCOCG00031464001;Name=Cc10_g10040 | |
| 44539 chr10 manual_curation mRNA 10672342 10674870 . - . ID=GSCOCT00031464001;Parent=GSCOCG00031464001;Name=Cc10_g10040 | |
| 44540 chr10 manual_curation polypeptide 10672532 10674870 . - . ID=GSCOCP00031464001;Dbxref=SwissProt:Q5REM8,SwissProt:Q6UW68,SwissProt:Q91XE8,TAIR:AT1G22600.1,TAIR:AT1G72100.1,TrEMBL:B9S750,TrEMBL:F6HWB9,TrEMBL:I1KW97;Derives_from=GSCOCT00031464001;Name=Cc10_g10040;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Late embryogenesis abundant protein (LEA) family protein,CC_functional_completeness:complete,CC_gene:Tmem205,CC_gene:TMEM205;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031464001~ Putative Late embryogenesis abundant protein (LEA) family protein~ Tmem205~ complete;original_location=join(983935..984402%2C984784..985302%2C985956..986273);owner=coffea | |
| 44541 chr10 manual_curation exon 10674403 10674870 . - . Parent=GSCOCT00031464001 | |
| 44542 chr10 manual_curation exon 10673503 10674021 . - . Parent=GSCOCT00031464001 | |
| 44543 chr10 manual_curation exon 10672342 10672849 . - . Parent=GSCOCT00031464001 | |
| 44544 chr10 manual_curation CDS 10674403 10674870 . - 0 Parent=GSCOCT00031464001 | |
| 44545 chr10 manual_curation CDS 10673503 10674021 . - 0 Parent=GSCOCT00031464001 | |
| 44546 chr10 manual_curation CDS 10672532 10672849 . - 0 Parent=GSCOCT00031464001 | |
| 44547 chr10 manual_curation gene 10706824 10711196 . + . ID=GSCOCG00031463001;Name=Cc10_g10050 | |
| 44548 chr10 manual_curation mRNA 10706824 10711196 . + . ID=GSCOCT00031463001;Parent=GSCOCG00031463001;Name=Cc10_g10050 | |
| 44549 chr10 manual_curation polypeptide 10707842 10710779 . + . ID=GSCOCP00031463001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR006447,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR014778,InterPro:IPR017930,PFAM:PF00249,PROFILE:PS51294,SUPERFAMILY:SSF46689,SwissProt:Q93WJ9,SwissProt:Q9C616,SwissProt:Q9SAK5,TAIR:AT2G01060.1,TAIR:AT3G04450.1,TAIR:AT4G28610.1,TIGRFAMs:TIGR01557,TrEMBL:A5C966,TrEMBL:B9N3W8,TrEMBL:F6HD66;Derives_from=GSCOCT00031463001;Name=Cc10_g10050;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:myb-like HTH transcriptional regulator family protein,CC_functional_completeness:complete,CC_gene:APL,CC_gene:KAN2,CC_gene:KAN1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031463001~ myb-like HTH transcriptional regulator family protein~ APL~ complete;original_location=complement(join(950840..950963%2C950225..950301%2C950100..950142%2C949851..949908%2C949575..949644%2C948026..948451));owner=coffea | |
| 44550 chr10 manual_curation exon 10706824 10707276 . + . Parent=GSCOCT00031463001 | |
| 44551 chr10 manual_curation exon 10710354 10711196 . + . Parent=GSCOCT00031463001 | |
| 44552 chr10 manual_curation exon 10709161 10709230 . + . Parent=GSCOCT00031463001 | |
| 44553 chr10 manual_curation exon 10708897 10708954 . + . Parent=GSCOCT00031463001 | |
| 44554 chr10 manual_curation exon 10708663 10708705 . + . Parent=GSCOCT00031463001 | |
| 44555 chr10 manual_curation exon 10708504 10708580 . + . Parent=GSCOCT00031463001 | |
| 44556 chr10 manual_curation exon 10707749 10707965 . + . Parent=GSCOCT00031463001 | |
| 44557 chr10 manual_curation CDS 10710354 10710779 . + 0 Parent=GSCOCT00031463001 | |
| 44558 chr10 manual_curation CDS 10709161 10709230 . + 2 Parent=GSCOCT00031463001 | |
| 44559 chr10 manual_curation CDS 10708897 10708954 . + 1 Parent=GSCOCT00031463001 | |
| 44560 chr10 manual_curation CDS 10708663 10708705 . + 0 Parent=GSCOCT00031463001 | |
| 44561 chr10 manual_curation CDS 10708504 10708580 . + 1 Parent=GSCOCT00031463001 | |
| 44562 chr10 manual_curation CDS 10707842 10707965 . + 0 Parent=GSCOCT00031463001 | |
| 44563 chr10 manual_curation gene 10751801 10754494 . - . ID=GSCOCG00031461001;Name=Cc10_g10060 | |
| 44564 chr10 manual_curation mRNA 10751801 10754494 . - . ID=GSCOCT00031461001;Parent=GSCOCG00031461001;Name=Cc10_g10060 | |
| 44565 chr10 manual_curation polypeptide 10752195 10753205 . - . ID=GSCOCP00031461001;Dbxref=InterPro:IPR015338,PFAM:PF09258,TAIR:AT1G80290.2,TrEMBL:F4HS52,TrEMBL:Q8LG66,TrEMBL:Q9C975;Derives_from=GSCOCT00031461001;Name=Cc10_g10060;Ontology_term=CC_evidence_code:ISS,GO:0031227,CC_EC_number:2.4.1.224,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031461001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(905600..905814%2C906115..906610);owner=coffea | |
| 44566 chr10 manual_curation exon 10754308 10754494 . - . Parent=GSCOCT00031461001 | |
| 44567 chr10 manual_curation exon 10753458 10753570 . - . Parent=GSCOCT00031461001 | |
| 44568 chr10 manual_curation exon 10752991 10753291 . - . Parent=GSCOCT00031461001 | |
| 44569 chr10 manual_curation exon 10751801 10752690 . - . Parent=GSCOCT00031461001 | |
| 44570 chr10 manual_curation CDS 10752991 10753205 . - 0 Parent=GSCOCT00031461001 | |
| 44571 chr10 manual_curation CDS 10752195 10752690 . - 2 Parent=GSCOCT00031461001 | |
| 44572 chr10 manual_curation gene 10755377 10757732 . + . ID=GSCOCG00031460001;Name=Cc10_g10070 | |
| 44573 chr10 manual_curation mRNA 10755377 10757732 . + . ID=GSCOCT00031460001;Parent=GSCOCG00031460001;Name=Cc10_g10070 | |
| 44574 chr10 manual_curation polypeptide 10755377 10757641 . + . ID=GSCOCP00031460001;Dbxref=InterPro:IPR001841,PROFILE:PS50089,SwissProt:Q3ZCF6,SwissProt:Q9CPX9,TAIR:AT3G42830.1,TAIR:AT5G26640.1,TrEMBL:B9RFR6;Derives_from=GSCOCT00031460001;Name=Cc10_g10070;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Anaphase-promoting complex subunit 11,CC_functional_completeness:modules,CC_gene:APC11,CC_gene:Anapc11,CC_gene:ANAPC11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031460001~ Anaphase-promoting complex subunit 11~ APC11~ modules;original_location=complement(join(903405..903428%2C902833..902954%2C902114..902232%2C901164..901279));owner=coffea | |
| 44575 chr10 manual_curation exon 10757526 10757732 . + . Parent=GSCOCT00031460001 | |
| 44576 chr10 manual_curation exon 10756573 10756691 . + . Parent=GSCOCT00031460001 | |
| 44577 chr10 manual_curation exon 10755851 10755972 . + . Parent=GSCOCT00031460001 | |
| 44578 chr10 manual_curation exon 10755377 10755400 . + . Parent=GSCOCT00031460001 | |
| 44579 chr10 manual_curation CDS 10757526 10757641 . + 1 Parent=GSCOCT00031460001 | |
| 44580 chr10 manual_curation CDS 10756573 10756691 . + 2 Parent=GSCOCT00031460001 | |
| 44581 chr10 manual_curation CDS 10755851 10755972 . + 0 Parent=GSCOCT00031460001 | |
| 44582 chr10 manual_curation CDS 10755377 10755400 . + 0 Parent=GSCOCT00031460001 | |
| 44583 chr10 manual_curation gene 10759589 10761898 . - . ID=GSCOCG00031458001;Name=Cc10_g10080 | |
| 44584 chr10 manual_curation mRNA 10759589 10761898 . - . ID=GSCOCT00031458001;Parent=GSCOCG00031458001;Name=Cc10_g10080 | |
| 44585 chr10 manual_curation polypeptide 10759589 10761898 . - . ID=GSCOCP00031458001;Dbxref=InterPro:IPR000008,InterPro:IPR008973,InterPro:IPR013583,InterPro:IPR018029,PFAM:PF00168,PFAM:PF08372,PROFILE:PS50004,SMART:SM00239,SUPERFAMILY:SSF49562,SwissProt:Q5RJH2,TAIR:AT1G22610.1,TAIR:AT1G51570.1,TAIR:AT3G57880.1,TrEMBL:B9MWC7,TrEMBL:B9S748,TrEMBL:F6GY02;Derives_from=GSCOCT00031458001;Name=Cc10_g10080;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:C2 calcium/lipid-binding plant phosphoribosyltransferase family protein,CC_functional_completeness:fragment,CC_gene:Mctp2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031458001~ C2 calcium/lipid-binding plant phosphoribosyltransferase family protein~ Mctp2~ fragment;original_location=896907..899216;owner=coffea | |
| 44586 chr10 manual_curation exon 10759589 10761898 . - . Parent=GSCOCT00031458001 | |
| 44587 chr10 manual_curation CDS 10759589 10761898 . - 0 Parent=GSCOCT00031458001 | |
| 44588 chr10 manual_curation gene 10766507 10772677 . + . ID=GSCOCG00031457001;Name=Cc10_g10090 | |
| 44589 chr10 manual_curation mRNA 10766507 10772677 . + . ID=GSCOCT00031457001;Parent=GSCOCG00031457001;Name=Cc10_g10090 | |
| 44590 chr10 manual_curation polypeptide 10768593 10771220 . + . ID=GSCOCP00031457001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q60CZ8,SwissProt:Q6L400,SwissProt:Q6L438,TAIR:AT1G50180.1,TAIR:AT1G53350.1,TAIR:AT3G46530.1,TrEMBL:G8E840,TrEMBL:G8E841,TrEMBL:G8E842;Derives_from=GSCOCT00031457001;Name=Cc10_g10090;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1B-16,CC_functional_completeness:fragment,CC_gene:R1B-16,CC_gene:R1A-6,CC_gene:R1A-10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031457001~ Putative late blight resistance protein homolog R1B-16~ R1B-16~ fragment;original_location=complement(join(889298..890212%2C888650..889231%2C888194..888490%2C887585..888121));owner=coffea | |
| 44591 chr10 manual_curation exon 10766507 10766681 . + . Parent=GSCOCT00031457001 | |
| 44592 chr10 manual_curation exon 10770684 10772677 . + . Parent=GSCOCT00031457001 | |
| 44593 chr10 manual_curation exon 10770315 10770611 . + . Parent=GSCOCT00031457001 | |
| 44594 chr10 manual_curation exon 10769574 10770155 . + . Parent=GSCOCT00031457001 | |
| 44595 chr10 manual_curation exon 10768457 10769507 . + . Parent=GSCOCT00031457001 | |
| 44596 chr10 manual_curation CDS 10770684 10771220 . + 0 Parent=GSCOCT00031457001 | |
| 44597 chr10 manual_curation CDS 10770315 10770611 . + 0 Parent=GSCOCT00031457001 | |
| 44598 chr10 manual_curation CDS 10769574 10770155 . + 0 Parent=GSCOCT00031457001 | |
| 44599 chr10 manual_curation CDS 10768593 10769507 . + 0 Parent=GSCOCT00031457001 | |
| 44600 chr10 manual_curation gene 10774132 10774974 . + . ID=GSCOCG00031456001;Name=Cc10_g10100 | |
| 44601 chr10 manual_curation mRNA 10774132 10774974 . + . ID=GSCOCT00031456001;Parent=GSCOCG00031456001;Name=Cc10_g10100 | |
| 44602 chr10 manual_curation polypeptide 10774132 10774763 . + . ID=GSCOCP00031456001;Derives_from=GSCOCT00031456001;Name=Cc10_g10100;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031456001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(884518..884673%2C884042..884155));owner=coffea | |
| 44603 chr10 manual_curation exon 10774650 10774974 . + . Parent=GSCOCT00031456001 | |
| 44604 chr10 manual_curation exon 10774132 10774287 . + . Parent=GSCOCT00031456001 | |
| 44605 chr10 manual_curation CDS 10774650 10774763 . + 0 Parent=GSCOCT00031456001 | |
| 44606 chr10 manual_curation CDS 10774132 10774287 . + 0 Parent=GSCOCT00031456001 | |
| 44607 chr10 manual_curation gene 10791669 10794731 . + . ID=GSCOCG00031455001;Name=Cc10_g10110 | |
| 44608 chr10 manual_curation mRNA 10791669 10794731 . + . ID=GSCOCT00031455001;Parent=GSCOCG00031455001;Name=Cc10_g10110 | |
| 44609 chr10 manual_curation polypeptide 10791669 10794731 . + . ID=GSCOCP00031455001;Dbxref=InterPro:IPR000008,InterPro:IPR008973,InterPro:IPR013583,InterPro:IPR018029,PFAM:PF00168,PFAM:PF08372,PROFILE:PS50004,SMART:SM00239,SUPERFAMILY:SSF49562,SwissProt:Q9ZVT9,TAIR:AT1G22610.1,TAIR:AT3G57880.1,TAIR:AT4G11610.1,TrEMBL:B9S748,TrEMBL:F6GY02,TrEMBL:I1LNN7;Derives_from=GSCOCT00031455001;Name=Cc10_g10110;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:C2 calcium/lipid-binding plant phosphoribosyltransferase family protein,CC_functional_completeness:complete,CC_gene:At1g03370;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031455001~ C2 calcium/lipid-binding plant phosphoribosyltransferase family protein~ At1g03370~ complete;original_location=complement(864074..867136);owner=coffea | |
| 44610 chr10 manual_curation exon 10791669 10794731 . + . Parent=GSCOCT00031455001 | |
| 44611 chr10 manual_curation CDS 10791669 10794731 . + 0 Parent=GSCOCT00031455001 | |
| 44612 chr10 manual_curation gene 10794860 10800991 . - . ID=GSCOCG00031454001;Name=Cc10_g10120 | |
| 44613 chr10 manual_curation mRNA 10794860 10800991 . - . ID=GSCOCT00031454001;Parent=GSCOCG00031454001;Name=Cc10_g10120 | |
| 44614 chr10 manual_curation polypeptide 10795243 10800850 . - . ID=GSCOCP00031454001;Dbxref=GENE3D:G3DSA:3.20.20.70,InterPro:IPR002792,InterPro:IPR005839,InterPro:IPR006466,InterPro:IPR006638,InterPro:IPR007197,InterPro:IPR013785,InterPro:IPR013848,InterPro:IPR020612,PANTHER:PTHR11918,PFAM:PF00919,PFAM:PF04055,PROFILE:PS50926,PROFILE:PS51449,PROSITE:PS01278,SMART:SM00729,SwissProt:Q5VV42,SwissProt:Q6NS26,SwissProt:Q6P4Y0,TAIR:AT1G72090.1,TAIR:AT4G36390.1,TIGRFAMs:TIGR00089,TIGRFAMs:TIGR01578,TrEMBL:B9MWC6,TrEMBL:B9S747,TrEMBL:I1LNN6;Derives_from=GSCOCT00031454001;Name=Cc10_g10120;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005575,GO:0008152,GO:0009451,GO:0051536,CC_EC_number:missing_EC_number,PRODUCT:Threonylcarbamoyladenosine tRNA methylthiotransferase,CC_functional_completeness:modules,CC_gene:cdkal1,CC_gene:CDKAL1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031454001~ Threonylcarbamoyladenosine tRNA methylthiotransferase~ cdkal1~ modules;original_location=join(857955..858116%2C858214..858252%2C859657..859748%2C860309..860558%2C860673..860792%2C860865..860940%2C861140..861348%2C861532..861640%2C862145..862237%2C862459..862619%2C863059..863562);owner=coffea | |
| 44615 chr10 manual_curation exon 10800689 10800991 . - . Parent=GSCOCT00031454001 | |
| 44616 chr10 manual_curation exon 10800553 10800591 . - . Parent=GSCOCT00031454001 | |
| 44617 chr10 manual_curation exon 10799057 10799148 . - . Parent=GSCOCT00031454001 | |
| 44618 chr10 manual_curation exon 10798247 10798496 . - . Parent=GSCOCT00031454001 | |
| 44619 chr10 manual_curation exon 10798013 10798132 . - . Parent=GSCOCT00031454001 | |
| 44620 chr10 manual_curation exon 10797865 10797940 . - . Parent=GSCOCT00031454001 | |
| 44621 chr10 manual_curation exon 10797457 10797665 . - . Parent=GSCOCT00031454001 | |
| 44622 chr10 manual_curation exon 10797165 10797273 . - . Parent=GSCOCT00031454001 | |
| 44623 chr10 manual_curation exon 10796568 10796660 . - . Parent=GSCOCT00031454001 | |
| 44624 chr10 manual_curation exon 10796186 10796346 . - . Parent=GSCOCT00031454001 | |
| 44625 chr10 manual_curation exon 10794860 10795746 . - . Parent=GSCOCT00031454001 | |
| 44626 chr10 manual_curation CDS 10800689 10800850 . - 0 Parent=GSCOCT00031454001 | |
| 44627 chr10 manual_curation CDS 10800553 10800591 . - 0 Parent=GSCOCT00031454001 | |
| 44628 chr10 manual_curation CDS 10799057 10799148 . - 0 Parent=GSCOCT00031454001 | |
| 44629 chr10 manual_curation CDS 10798247 10798496 . - 2 Parent=GSCOCT00031454001 | |
| 44630 chr10 manual_curation CDS 10798013 10798132 . - 0 Parent=GSCOCT00031454001 | |
| 44631 chr10 manual_curation CDS 10797865 10797940 . - 0 Parent=GSCOCT00031454001 | |
| 44632 chr10 manual_curation CDS 10797457 10797665 . - 1 Parent=GSCOCT00031454001 | |
| 44633 chr10 manual_curation CDS 10797165 10797273 . - 0 Parent=GSCOCT00031454001 | |
| 44634 chr10 manual_curation CDS 10796568 10796660 . - 1 Parent=GSCOCT00031454001 | |
| 44635 chr10 manual_curation CDS 10796186 10796346 . - 1 Parent=GSCOCT00031454001 | |
| 44636 chr10 manual_curation CDS 10795243 10795746 . - 0 Parent=GSCOCT00031454001 | |
| 44637 chr10 manual_curation gene 10856885 10857347 . - . ID=GSCOCG00031452001;Name=Cc10_g10130 | |
| 44638 chr10 manual_curation mRNA 10856885 10857347 . - . ID=GSCOCT00031452001;Parent=GSCOCG00031452001;Name=Cc10_g10130 | |
| 44639 chr10 manual_curation polypeptide 10856885 10857347 . - . ID=GSCOCP00031452001;Dbxref=InterPro:IPR010851,PFAM:PF07333;Derives_from=GSCOCT00031452001;Name=Cc10_g10130;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative S locus-related glycoprotein 1 binding pollen coat,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031452001~ Putative S locus-related glycoprotein 1 binding pollen coat~ unknown_gene~ complete;original_location=join(801458..801551%2C801742..801920);owner=coffea | |
| 44640 chr10 manual_curation exon 10857254 10857347 . - . Parent=GSCOCT00031452001 | |
| 44641 chr10 manual_curation exon 10856885 10857063 . - . Parent=GSCOCT00031452001 | |
| 44642 chr10 manual_curation CDS 10857254 10857347 . - 0 Parent=GSCOCT00031452001 | |
| 44643 chr10 manual_curation CDS 10856885 10857063 . - 1 Parent=GSCOCT00031452001 | |
| 44644 chr10 manual_curation gene 10858160 10858622 . + . ID=GSCOCG00031451001;Name=Cc10_g10140 | |
| 44645 chr10 manual_curation mRNA 10858160 10858622 . + . ID=GSCOCT00031451001;Parent=GSCOCG00031451001;Name=Cc10_g10140 | |
| 44646 chr10 manual_curation polypeptide 10858160 10858622 . + . ID=GSCOCP00031451001;Dbxref=InterPro:IPR010851,PFAM:PF07333;Derives_from=GSCOCT00031451001;Name=Cc10_g10140;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative S locus-related glycoprotein 1 binding pollen coat,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031451001~ Putative S locus-related glycoprotein 1 binding pollen coat~ unknown_gene~ complete;original_location=complement(join(800552..800645%2C800183..800361));owner=coffea | |
| 44647 chr10 manual_curation exon 10858444 10858622 . + . Parent=GSCOCT00031451001 | |
| 44648 chr10 manual_curation exon 10858160 10858253 . + . Parent=GSCOCT00031451001 | |
| 44649 chr10 manual_curation CDS 10858444 10858622 . + 1 Parent=GSCOCT00031451001 | |
| 44650 chr10 manual_curation CDS 10858160 10858253 . + 0 Parent=GSCOCT00031451001 | |
| 44651 chr10 manual_curation gene 10862964 10897974 . - . ID=GSCOCG00031450001;Name=Cc10_g10150 | |
| 44652 chr10 manual_curation mRNA 10862964 10897974 . - . ID=GSCOCT00031450001;Parent=GSCOCG00031450001;Name=Cc10_g10150 | |
| 44653 chr10 manual_curation polypeptide 10863371 10897789 . - . ID=GSCOCP00031450001;Dbxref=InterPro:IPR002013,PFAM:PF02383,PROFILE:PS50275,SwissProt:P42837,SwissProt:Q91WF7,SwissProt:Q92562,TAIR:AT1G22620.1,TAIR:AT3G14205.1,TAIR:AT3G43220.1,TrEMBL:D7TXI8,TrEMBL:I1KW89,TrEMBL:I1LNN4;Derives_from=GSCOCT00031450001;Name=Cc10_g10150;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Phosphoinositide phosphatase family protein,CC_functional_completeness:complete,CC_gene:Fig4,CC_gene:FIG4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031450001~ Phosphoinositide phosphatase family protein~ Fig4~ complete;original_location=join(761016..761153%2C761623..761827%2C761932..762097%2C772532..772754%2C773540..773616%2C781168..781355%2C781546..781643%2C782199..782332%2C782411..782545%2C784408..784792%2C784899..785020%2C785214..785324%2C786810..787007%2C788115..788306%2C791371..791482%2C795186..795434);owner=coffea | |
| 44654 chr10 manual_curation exon 10897652 10897974 . - . Parent=GSCOCT00031450001 | |
| 44655 chr10 manual_curation exon 10896978 10897182 . - . Parent=GSCOCT00031450001 | |
| 44656 chr10 manual_curation exon 10896708 10896873 . - . Parent=GSCOCT00031450001 | |
| 44657 chr10 manual_curation exon 10886051 10886273 . - . Parent=GSCOCT00031450001 | |
| 44658 chr10 manual_curation exon 10885189 10885265 . - . Parent=GSCOCT00031450001 | |
| 44659 chr10 manual_curation exon 10877450 10877637 . - . Parent=GSCOCT00031450001 | |
| 44660 chr10 manual_curation exon 10877162 10877259 . - . Parent=GSCOCT00031450001 | |
| 44661 chr10 manual_curation exon 10876473 10876606 . - . Parent=GSCOCT00031450001 | |
| 44662 chr10 manual_curation exon 10876260 10876394 . - . Parent=GSCOCT00031450001 | |
| 44663 chr10 manual_curation exon 10874013 10874397 . - . Parent=GSCOCT00031450001 | |
| 44664 chr10 manual_curation exon 10873785 10873906 . - . Parent=GSCOCT00031450001 | |
| 44665 chr10 manual_curation exon 10873481 10873591 . - . Parent=GSCOCT00031450001 | |
| 44666 chr10 manual_curation exon 10871798 10871995 . - . Parent=GSCOCT00031450001 | |
| 44667 chr10 manual_curation exon 10870499 10870690 . - . Parent=GSCOCT00031450001 | |
| 44668 chr10 manual_curation exon 10867323 10867434 . - . Parent=GSCOCT00031450001 | |
| 44669 chr10 manual_curation exon 10862964 10863619 . - . Parent=GSCOCT00031450001 | |
| 44670 chr10 manual_curation CDS 10897652 10897789 . - 0 Parent=GSCOCT00031450001 | |
| 44671 chr10 manual_curation CDS 10896978 10897182 . - 0 Parent=GSCOCT00031450001 | |
| 44672 chr10 manual_curation CDS 10896708 10896873 . - 1 Parent=GSCOCT00031450001 | |
| 44673 chr10 manual_curation CDS 10886051 10886273 . - 2 Parent=GSCOCT00031450001 | |
| 44674 chr10 manual_curation CDS 10885189 10885265 . - 0 Parent=GSCOCT00031450001 | |
| 44675 chr10 manual_curation CDS 10877450 10877637 . - 2 Parent=GSCOCT00031450001 | |
| 44676 chr10 manual_curation CDS 10877162 10877259 . - 1 Parent=GSCOCT00031450001 | |
| 44677 chr10 manual_curation CDS 10876473 10876606 . - 0 Parent=GSCOCT00031450001 | |
| 44678 chr10 manual_curation CDS 10876260 10876394 . - 2 Parent=GSCOCT00031450001 | |
| 44679 chr10 manual_curation CDS 10874013 10874397 . - 2 Parent=GSCOCT00031450001 | |
| 44680 chr10 manual_curation CDS 10873785 10873906 . - 0 Parent=GSCOCT00031450001 | |
| 44681 chr10 manual_curation CDS 10873481 10873591 . - 2 Parent=GSCOCT00031450001 | |
| 44682 chr10 manual_curation CDS 10871798 10871995 . - 2 Parent=GSCOCT00031450001 | |
| 44683 chr10 manual_curation CDS 10870499 10870690 . - 2 Parent=GSCOCT00031450001 | |
| 44684 chr10 manual_curation CDS 10867323 10867434 . - 2 Parent=GSCOCT00031450001 | |
| 44685 chr10 manual_curation CDS 10863371 10863619 . - 0 Parent=GSCOCT00031450001 | |
| 44686 chr10 manual_curation gene 11003493 11008211 . + . ID=GSCOCG00031448001;Name=Cc10_g10160 | |
| 44687 chr10 manual_curation mRNA 11003493 11008211 . + . ID=GSCOCT00031448001;Parent=GSCOCG00031448001;Name=Cc10_g10160 | |
| 44688 chr10 manual_curation polypeptide 11003688 11007883 . + . ID=GSCOCP00031448001;Dbxref=InterPro:IPR001330,InterPro:IPR002365,InterPro:IPR008930,InterPro:IPR018333,PFAM:PF00432,PROSITE:PS01074,SUPERFAMILY:SSF48239,SwissProt:E7DN63,SwissProt:O82146,SwissProt:Q08IT1,TAIR:AT1G78950.1,TAIR:AT1G78955.1,TAIR:AT1G78960.1,TIGRFAMs:TIGR01787,TrEMBL:A5LHW8,TrEMBL:G0WVE6,TrEMBL:H2ER43;Derives_from=GSCOCT00031448001;Name=Cc10_g10160;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0016866,CC_EC_number:5.4.99.8,PRODUCT:Dammarenediol II synthase,CC_functional_completeness:complete,CC_gene:PNA,CC_gene:TTS1,CC_gene:OSCPNY2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031448001~ Dammarenediol II synthase~ PNA~ complete;original_location=complement(join(654917..655117%2C654637..654825%2C654443..654532%2C654134..654328%2C653722..653973%2C653323..653511%2C652988..653101%2C652614..652856%2C652429..652527%2C652072..652178%2C651802..651945%2C651515..651692%2C651336..651416%2C651156..651239%2C650922..651041));owner=coffea | |
| 44689 chr10 manual_curation exon 11007764 11008211 . + . Parent=GSCOCT00031448001 | |
| 44690 chr10 manual_curation exon 11007566 11007649 . + . Parent=GSCOCT00031448001 | |
| 44691 chr10 manual_curation exon 11007389 11007469 . + . Parent=GSCOCT00031448001 | |
| 44692 chr10 manual_curation exon 11007113 11007290 . + . Parent=GSCOCT00031448001 | |
| 44693 chr10 manual_curation exon 11006860 11007003 . + . Parent=GSCOCT00031448001 | |
| 44694 chr10 manual_curation exon 11006627 11006733 . + . Parent=GSCOCT00031448001 | |
| 44695 chr10 manual_curation exon 11006278 11006376 . + . Parent=GSCOCT00031448001 | |
| 44696 chr10 manual_curation exon 11005949 11006191 . + . Parent=GSCOCT00031448001 | |
| 44697 chr10 manual_curation exon 11005704 11005817 . + . Parent=GSCOCT00031448001 | |
| 44698 chr10 manual_curation exon 11005294 11005482 . + . Parent=GSCOCT00031448001 | |
| 44699 chr10 manual_curation exon 11004832 11005083 . + . Parent=GSCOCT00031448001 | |
| 44700 chr10 manual_curation exon 11004477 11004671 . + . Parent=GSCOCT00031448001 | |
| 44701 chr10 manual_curation exon 11004273 11004362 . + . Parent=GSCOCT00031448001 | |
| 44702 chr10 manual_curation exon 11003980 11004168 . + . Parent=GSCOCT00031448001 | |
| 44703 chr10 manual_curation exon 11003493 11003888 . + . Parent=GSCOCT00031448001 | |
| 44704 chr10 manual_curation CDS 11007764 11007883 . + 0 Parent=GSCOCT00031448001 | |
| 44705 chr10 manual_curation CDS 11007566 11007649 . + 0 Parent=GSCOCT00031448001 | |
| 44706 chr10 manual_curation CDS 11007389 11007469 . + 0 Parent=GSCOCT00031448001 | |
| 44707 chr10 manual_curation CDS 11007113 11007290 . + 2 Parent=GSCOCT00031448001 | |
| 44708 chr10 manual_curation CDS 11006860 11007003 . + 2 Parent=GSCOCT00031448001 | |
| 44709 chr10 manual_curation CDS 11006627 11006733 . + 0 Parent=GSCOCT00031448001 | |
| 44710 chr10 manual_curation CDS 11006278 11006376 . + 0 Parent=GSCOCT00031448001 | |
| 44711 chr10 manual_curation CDS 11005949 11006191 . + 0 Parent=GSCOCT00031448001 | |
| 44712 chr10 manual_curation CDS 11005704 11005817 . + 0 Parent=GSCOCT00031448001 | |
| 44713 chr10 manual_curation CDS 11005294 11005482 . + 0 Parent=GSCOCT00031448001 | |
| 44714 chr10 manual_curation CDS 11004832 11005083 . + 0 Parent=GSCOCT00031448001 | |
| 44715 chr10 manual_curation CDS 11004477 11004671 . + 0 Parent=GSCOCT00031448001 | |
| 44716 chr10 manual_curation CDS 11004273 11004362 . + 0 Parent=GSCOCT00031448001 | |
| 44717 chr10 manual_curation CDS 11003980 11004168 . + 0 Parent=GSCOCT00031448001 | |
| 44718 chr10 manual_curation CDS 11003688 11003888 . + 0 Parent=GSCOCT00031448001 | |
| 44719 chr10 manual_curation gene 11026753 11028483 . - . ID=GSCOCG00031445001;Name=Cc10_g10170 | |
| 44720 chr10 manual_curation mRNA 11026753 11028483 . - . ID=GSCOCT00031445001;Parent=GSCOCG00031445001;Name=Cc10_g10170 | |
| 44721 chr10 manual_curation polypeptide 11026753 11028483 . - . ID=GSCOCP00031445001;Dbxref=InterPro:IPR021042,PFAM:PF12507,TAIR:AT2G34580.1,TrEMBL:B9S110,TrEMBL:F4IHX8,TrEMBL:O64689;Derives_from=GSCOCT00031445001;Name=Cc10_g10170;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:CONTAINS InterPro DOMAIN/s,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031445001~ CONTAINS InterPro DOMAIN/s: Herpesvirus UL139%2C cytomegalovirus (InterPro:IPR021042)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(630322..630399%2C630483..630670%2C631869..632052);owner=coffea | |
| 44722 chr10 manual_curation exon 11028406 11028483 . - . Parent=GSCOCT00031445001 | |
| 44723 chr10 manual_curation exon 11028135 11028322 . - . Parent=GSCOCT00031445001 | |
| 44724 chr10 manual_curation exon 11026753 11026936 . - . Parent=GSCOCT00031445001 | |
| 44725 chr10 manual_curation CDS 11028406 11028483 . - 0 Parent=GSCOCT00031445001 | |
| 44726 chr10 manual_curation CDS 11028135 11028322 . - 0 Parent=GSCOCT00031445001 | |
| 44727 chr10 manual_curation CDS 11026753 11026936 . - 2 Parent=GSCOCT00031445001 | |
| 44728 chr10 manual_curation gene 11034255 11034900 . - . ID=GSCOCG00031444001;Name=Cc10_g10180 | |
| 44729 chr10 manual_curation mRNA 11034255 11034900 . - . ID=GSCOCT00031444001;Parent=GSCOCG00031444001;Name=Cc10_g10180 | |
| 44730 chr10 manual_curation polypeptide 11034448 11034900 . - . ID=GSCOCP00031444001;Dbxref=InterPro:IPR003465,PFAM:PF02428,TAIR:AT1G72060.1,TrEMBL:C5XFQ2,TrEMBL:C5XFQ3,TrEMBL:I1HDV9;Derives_from=GSCOCT00031444001;Name=Cc10_g10180;Ontology_term=CC_evidence_code:ISS,GO:0004867,CC_EC_number:missing_EC_number,PRODUCT:serine-type endopeptidase inhibitors,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031444001~ serine-type endopeptidase inhibitors~ unknown_gene~ modules;original_location=join(623905..624007%2C624173..624357);owner=coffea | |
| 44731 chr10 manual_curation exon 11034798 11034900 . - . Parent=GSCOCT00031444001 | |
| 44732 chr10 manual_curation exon 11034255 11034632 . - . Parent=GSCOCT00031444001 | |
| 44733 chr10 manual_curation CDS 11034798 11034900 . - 0 Parent=GSCOCT00031444001 | |
| 44734 chr10 manual_curation CDS 11034448 11034632 . - 1 Parent=GSCOCT00031444001 | |
| 44735 chr10 manual_curation gene 11045994 11046815 . + . ID=GSCOCG00031443001;Name=Cc10_g10190 | |
| 44736 chr10 manual_curation mRNA 11045994 11046815 . + . ID=GSCOCT00031443001;Parent=GSCOCG00031443001;Name=Cc10_g10190 | |
| 44737 chr10 manual_curation polypeptide 11045994 11046815 . + . ID=GSCOCP00031443001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR000626,InterPro:IPR016040,InterPro:IPR019955,InterPro:IPR019956,PFAM:PF00240,PRINTS:PR00348,PROFILE:PS50053,SwissProt:P0C031,SwissProt:Q8RUC6,SwissProt:Q9ZUC1,TAIR:AT1G23740.1,TAIR:AT1G31340.1,TAIR:AT2G35635.1,TrEMBL:B9SHB0,TrEMBL:C6T8J2,TrEMBL:I1N1G8;Derives_from=GSCOCT00031443001;Name=Cc10_g10190;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:At1g23740,CC_gene:RUB2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031443001~ Hypothetical protein~ At1g23740~ missing_functional_completeness;original_location=complement(join(612764..612811%2C612489..612688%2C611990..612287));owner=coffea | |
| 44738 chr10 manual_curation exon 11046518 11046815 . + . Parent=GSCOCT00031443001 | |
| 44739 chr10 manual_curation exon 11046117 11046316 . + . Parent=GSCOCT00031443001 | |
| 44740 chr10 manual_curation exon 11045994 11046041 . + . Parent=GSCOCT00031443001 | |
| 44741 chr10 manual_curation CDS 11046518 11046815 . + 2 Parent=GSCOCT00031443001 | |
| 44742 chr10 manual_curation CDS 11046117 11046316 . + 0 Parent=GSCOCT00031443001 | |
| 44743 chr10 manual_curation CDS 11045994 11046041 . + 0 Parent=GSCOCT00031443001 | |
| 44744 chr10 manual_curation gene 11127743 11128316 . - . ID=GSCOCG00031441001;Name=Cc10_g10200 | |
| 44745 chr10 manual_curation mRNA 11127743 11128316 . - . ID=GSCOCT00031441001;Parent=GSCOCG00031441001;Name=Cc10_g10200 | |
| 44746 chr10 manual_curation polypeptide 11127926 11128316 . - . ID=GSCOCP00031441001;Dbxref=InterPro:IPR003465,PFAM:PF02428,TAIR:AT1G72060.1,TrEMBL:D7KZ92,TrEMBL:I1HDV9,TrEMBL:Q6NQ47;Derives_from=GSCOCT00031441001;Name=Cc10_g10200;Ontology_term=CC_evidence_code:ISS,GO:0004867,CC_EC_number:missing_EC_number,PRODUCT:serine-type endopeptidase inhibitors,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031441001~ serine-type endopeptidase inhibitors~ unknown_gene~ complete;original_location=join(530489..530534%2C530692..530879);owner=coffea | |
| 44747 chr10 manual_curation exon 11128271 11128316 . - . Parent=GSCOCT00031441001 | |
| 44748 chr10 manual_curation exon 11127743 11128113 . - . Parent=GSCOCT00031441001 | |
| 44749 chr10 manual_curation CDS 11128271 11128316 . - 0 Parent=GSCOCT00031441001 | |
| 44750 chr10 manual_curation CDS 11127926 11128113 . - 1 Parent=GSCOCT00031441001 | |
| 44751 chr10 manual_curation gene 11134445 11135136 . - . ID=GSCOCG00031440001;Name=Cc10_g10210 | |
| 44752 chr10 manual_curation mRNA 11134445 11135136 . - . ID=GSCOCT00031440001;Parent=GSCOCG00031440001;Name=Cc10_g10210 | |
| 44753 chr10 manual_curation polypeptide 11134445 11135136 . - . ID=GSCOCP00031440001;Dbxref=InterPro:IPR003465,PFAM:PF02428;Derives_from=GSCOCT00031440001;Name=Cc10_g10210;Ontology_term=CC_evidence_code:ISS,GO:0004867,CC_EC_number:missing_EC_number,PRODUCT:Putative Proteinase inhibitor I20%2C Pin2,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031440001~ Putative Proteinase inhibitor I20%2C Pin2~ unknown_gene~ complete;original_location=join(523669..523711%2C524161..524360);owner=coffea | |
| 44754 chr10 manual_curation exon 11135094 11135136 . - . Parent=GSCOCT00031440001 | |
| 44755 chr10 manual_curation exon 11134445 11134644 . - . Parent=GSCOCT00031440001 | |
| 44756 chr10 manual_curation CDS 11135094 11135136 . - 0 Parent=GSCOCT00031440001 | |
| 44757 chr10 manual_curation CDS 11134445 11134644 . - 1 Parent=GSCOCT00031440001 | |
| 44758 chr10 manual_curation gene 11183515 11186076 . + . ID=GSCOCG00031439001;Name=Cc10_g10220 | |
| 44759 chr10 manual_curation mRNA 11183515 11186076 . + . ID=GSCOCT00031439001;Parent=GSCOCG00031439001;Name=Cc10_g10220 | |
| 44760 chr10 manual_curation polypeptide 11183515 11186076 . + . ID=GSCOCP00031439001;Dbxref=InterPro:IPR002867,PFAM:PF01485,SMART:SM00647,SwissProt:Q84RR2,SwissProt:Q949V6,SwissProt:Q9LVX0,TAIR:AT2G16090.1,TAIR:AT3G27710.1,TAIR:AT4G34370.1,TrEMBL:A5AHG2,TrEMBL:B9HRS7,TrEMBL:D7TPW8;Derives_from=GSCOCT00031439001;Name=Cc10_g10220;Ontology_term=CC_evidence_code:ISS,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Probable E3 ubiquitin-protein ligase ARI2,CC_functional_completeness:fragment,CC_gene:ARI2,CC_gene:ARI1,CC_gene:ARI3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031439001~ Probable E3 ubiquitin-protein ligase ARI2~ ARI2~ fragment;original_location=complement(join(475257..475290%2C474024..474498%2C473853..473972%2C473562..473675%2C472970..473497%2C472729..472819));owner=coffea | |
| 44761 chr10 manual_curation exon 11185986 11186076 . + . Parent=GSCOCT00031439001 | |
| 44762 chr10 manual_curation exon 11185308 11185835 . + . Parent=GSCOCT00031439001 | |
| 44763 chr10 manual_curation exon 11185130 11185243 . + . Parent=GSCOCT00031439001 | |
| 44764 chr10 manual_curation exon 11184833 11184952 . + . Parent=GSCOCT00031439001 | |
| 44765 chr10 manual_curation exon 11184307 11184781 . + . Parent=GSCOCT00031439001 | |
| 44766 chr10 manual_curation exon 11183515 11183548 . + . Parent=GSCOCT00031439001 | |
| 44767 chr10 manual_curation CDS 11185986 11186076 . + 2 Parent=GSCOCT00031439001 | |
| 44768 chr10 manual_curation CDS 11185308 11185835 . + 2 Parent=GSCOCT00031439001 | |
| 44769 chr10 manual_curation CDS 11185130 11185243 . + 2 Parent=GSCOCT00031439001 | |
| 44770 chr10 manual_curation CDS 11184833 11184952 . + 2 Parent=GSCOCT00031439001 | |
| 44771 chr10 manual_curation CDS 11184307 11184781 . + 1 Parent=GSCOCT00031439001 | |
| 44772 chr10 manual_curation CDS 11183515 11183548 . + 0 Parent=GSCOCT00031439001 | |
| 44773 chr10 manual_curation gene 11194903 11198997 . + . ID=GSCOCG00031438001;Name=Cc10_g10230 | |
| 44774 chr10 manual_curation mRNA 11194903 11198997 . + . ID=GSCOCT00031438001;Parent=GSCOCG00031438001;Name=Cc10_g10230 | |
| 44775 chr10 manual_curation polypeptide 11195272 11198997 . + . ID=GSCOCP00031438001;Dbxref=InterPro:IPR001841,InterPro:IPR002867,PFAM:PF01485,PROFILE:PS50089,SMART:SM00647,SwissProt:Q84RR2,SwissProt:Q949V6,SwissProt:Q9LVX0,TAIR:AT2G16090.1,TAIR:AT3G27710.1,TAIR:AT4G34370.1,TrEMBL:B9HRS7,TrEMBL:D7TPW8,TrEMBL:I1LQ69;Derives_from=GSCOCT00031438001;Name=Cc10_g10230;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Probable E3 ubiquitin-protein ligase ARI1,CC_functional_completeness:complete,CC_gene:ARI1,CC_gene:ARI2,CC_gene:ARI3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031438001~ Probable E3 ubiquitin-protein ligase ARI1~ ARI1~ complete;original_location=complement(join(463396..463533%2C462739..462771%2C462365..462644%2C461131..461605%2C460058..460585%2C459808..459898));owner=coffea | |
| 44776 chr10 manual_curation exon 11198907 11198997 . + . Parent=GSCOCT00031438001 | |
| 44777 chr10 manual_curation exon 11198220 11198747 . + . Parent=GSCOCT00031438001 | |
| 44778 chr10 manual_curation exon 11197200 11197674 . + . Parent=GSCOCT00031438001 | |
| 44779 chr10 manual_curation exon 11196161 11196440 . + . Parent=GSCOCT00031438001 | |
| 44780 chr10 manual_curation exon 11196034 11196066 . + . Parent=GSCOCT00031438001 | |
| 44781 chr10 manual_curation exon 11194903 11195409 . + . Parent=GSCOCT00031438001 | |
| 44782 chr10 manual_curation CDS 11198907 11198997 . + 2 Parent=GSCOCT00031438001 | |
| 44783 chr10 manual_curation CDS 11198220 11198747 . + 2 Parent=GSCOCT00031438001 | |
| 44784 chr10 manual_curation CDS 11197200 11197674 . + 1 Parent=GSCOCT00031438001 | |
| 44785 chr10 manual_curation CDS 11196161 11196440 . + 0 Parent=GSCOCT00031438001 | |
| 44786 chr10 manual_curation CDS 11196034 11196066 . + 0 Parent=GSCOCT00031438001 | |
| 44787 chr10 manual_curation CDS 11195272 11195409 . + 0 Parent=GSCOCT00031438001 | |
| 44788 chr10 manual_curation gene 11199182 11201226 . - . ID=GSCOCG00031437001;Name=Cc10_g10240 | |
| 44789 chr10 manual_curation mRNA 11199182 11201226 . - . ID=GSCOCT00031437001;Parent=GSCOCG00031437001;Name=Cc10_g10240 | |
| 44790 chr10 manual_curation polypeptide 11200606 11201226 . - . ID=GSCOCP00031437001;Dbxref=InterPro:IPR003465,PFAM:PF02428;Derives_from=GSCOCT00031437001;Name=Cc10_g10240;Ontology_term=CC_evidence_code:ISS,GO:0004867,CC_EC_number:missing_EC_number,PRODUCT:Putative Proteinase inhibitor I20%2C Pin2,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031437001~ Putative Proteinase inhibitor I20%2C Pin2~ unknown_gene~ complete;original_location=join(457579..457621%2C458003..458199);owner=coffea | |
| 44791 chr10 manual_curation exon 11201184 11201226 . - . Parent=GSCOCT00031437001 | |
| 44792 chr10 manual_curation exon 11199182 11200802 . - . Parent=GSCOCT00031437001 | |
| 44793 chr10 manual_curation CDS 11201184 11201226 . - 0 Parent=GSCOCT00031437001 | |
| 44794 chr10 manual_curation CDS 11200606 11200802 . - 1 Parent=GSCOCT00031437001 | |
| 44795 chr10 manual_curation gene 11218638 11219319 . + . ID=GSCOCG00031436001;Name=Cc10_g10250 | |
| 44796 chr10 manual_curation mRNA 11218638 11219319 . + . ID=GSCOCT00031436001;Parent=GSCOCG00031436001;Name=Cc10_g10250 | |
| 44797 chr10 manual_curation polypeptide 11218638 11219319 . + . ID=GSCOCP00031436001;Dbxref=InterPro:IPR005124,PANTHER:PTHR12713,PFAM:PF03179,SwissProt:O82628,SwissProt:Q9SP55,SwissProt:Q9SZH0,TAIR:AT3G01390.1,TAIR:AT4G23710.1,TAIR:AT4G25950.1,TIGRFAMs:TIGR01147,TrEMBL:B9IQG1,TrEMBL:B9S761,TrEMBL:D6BR50;Derives_from=GSCOCT00031436001;Name=Cc10_g10250;Ontology_term=CC_evidence_code:ISS,GO:0015992,GO:0016471,CC_EC_number:missing_EC_number,PRODUCT:V-type proton ATPase subunit G,CC_functional_completeness:complete,CC_gene:VATG,CC_gene:VHA-G3,CC_gene:VHA-G1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031436001~ V-type proton ATPase subunit G~ VATG~ complete;original_location=complement(join(440080..440167%2C439760..439860%2C439486..439629));owner=coffea | |
| 44798 chr10 manual_curation exon 11219176 11219319 . + . Parent=GSCOCT00031436001 | |
| 44799 chr10 manual_curation exon 11218945 11219045 . + . Parent=GSCOCT00031436001 | |
| 44800 chr10 manual_curation exon 11218638 11218725 . + . Parent=GSCOCT00031436001 | |
| 44801 chr10 manual_curation CDS 11219176 11219319 . + 0 Parent=GSCOCT00031436001 | |
| 44802 chr10 manual_curation CDS 11218945 11219045 . + 1 Parent=GSCOCT00031436001 | |
| 44803 chr10 manual_curation CDS 11218638 11218725 . + 0 Parent=GSCOCT00031436001 | |
| 44804 chr10 manual_curation gene 11292492 11305788 . + . ID=GSCOCG00031435001;Name=Cc10_g10260 | |
| 44805 chr10 manual_curation mRNA 11292492 11305788 . + . ID=GSCOCT00031435001;Parent=GSCOCG00031435001;Name=Cc10_g10260 | |
| 44806 chr10 manual_curation polypeptide 11292803 11305389 . + . ID=GSCOCP00031435001;Dbxref=InterPro:IPR001870,InterPro:IPR003877,InterPro:IPR006595,InterPro:IPR013144,InterPro:IPR018355,InterPro:IPR019589,PFAM:PF00622,PFAM:PF10607,PROFILE:PS50188,PROFILE:PS50897,SMART:SM00449,SMART:SM00668,SMART:SM00757,SwissProt:Q1LUS8,SwissProt:Q6VN19,SwissProt:Q6VN20,TAIR:AT1G35470.2,TAIR:AT4G09310.1,TAIR:AT4G09340.1,TrEMBL:G7JP72,TrEMBL:I1KW85,TrEMBL:I1KW86;Derives_from=GSCOCT00031435001;Name=Cc10_g10260;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:SPla/RYanodine receptor (SPRY) domain-containing protein,CC_functional_completeness:complete,CC_gene:ranbp10,CC_gene:Ranbp10,CC_gene:RANBP10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031435001~ SPla/RYanodine receptor (SPRY) domain-containing protein~ ranbp10~ complete;original_location=complement(join(365620..366002%2C363799..363945%2C361868..361954%2C360473..360518%2C359068..359144%2C358418..358580%2C357098..357166%2C355500..355559%2C354123..354209%2C353416..353673));owner=coffea | |
| 44807 chr10 manual_curation exon 11305132 11305788 . + . Parent=GSCOCT00031435001 | |
| 44808 chr10 manual_curation exon 11304596 11304682 . + . Parent=GSCOCT00031435001 | |
| 44809 chr10 manual_curation exon 11303246 11303305 . + . Parent=GSCOCT00031435001 | |
| 44810 chr10 manual_curation exon 11301639 11301707 . + . Parent=GSCOCT00031435001 | |
| 44811 chr10 manual_curation exon 11300225 11300387 . + . Parent=GSCOCT00031435001 | |
| 44812 chr10 manual_curation exon 11299661 11299737 . + . Parent=GSCOCT00031435001 | |
| 44813 chr10 manual_curation exon 11298287 11298332 . + . Parent=GSCOCT00031435001 | |
| 44814 chr10 manual_curation exon 11296851 11296937 . + . Parent=GSCOCT00031435001 | |
| 44815 chr10 manual_curation exon 11294860 11295006 . + . Parent=GSCOCT00031435001 | |
| 44816 chr10 manual_curation exon 11292492 11293185 . + . Parent=GSCOCT00031435001 | |
| 44817 chr10 manual_curation CDS 11305132 11305389 . + 0 Parent=GSCOCT00031435001 | |
| 44818 chr10 manual_curation CDS 11304596 11304682 . + 0 Parent=GSCOCT00031435001 | |
| 44819 chr10 manual_curation CDS 11303246 11303305 . + 0 Parent=GSCOCT00031435001 | |
| 44820 chr10 manual_curation CDS 11301639 11301707 . + 0 Parent=GSCOCT00031435001 | |
| 44821 chr10 manual_curation CDS 11300225 11300387 . + 2 Parent=GSCOCT00031435001 | |
| 44822 chr10 manual_curation CDS 11299661 11299737 . + 0 Parent=GSCOCT00031435001 | |
| 44823 chr10 manual_curation CDS 11298287 11298332 . + 2 Parent=GSCOCT00031435001 | |
| 44824 chr10 manual_curation CDS 11296851 11296937 . + 2 Parent=GSCOCT00031435001 | |
| 44825 chr10 manual_curation CDS 11294860 11295006 . + 2 Parent=GSCOCT00031435001 | |
| 44826 chr10 manual_curation CDS 11292803 11293185 . + 0 Parent=GSCOCT00031435001 | |
| 44827 chr10 manual_curation gene 11311141 11312735 . - . ID=GSCOCG00031434001;Name=Cc10_g10270 | |
| 44828 chr10 manual_curation mRNA 11311141 11312735 . - . ID=GSCOCT00031434001;Parent=GSCOCG00031434001;Name=Cc10_g10270 | |
| 44829 chr10 manual_curation polypeptide 11311287 11312735 . - . ID=GSCOCP00031434001;Dbxref=GENE3D:G3DSA:2.40.50.140,InterPro:IPR012340,InterPro:IPR013955,InterPro:IPR016027,PFAM:PF08646,SUPERFAMILY:SSF50249,TAIR:AT4G19130.1,TAIR:AT5G08020.1,TAIR:AT5G61000.1,TrEMBL:D7M0P7,TrEMBL:O24183,TrEMBL:Q9SD82;Derives_from=GSCOCT00031434001;Name=Cc10_g10270;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031434001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(346070..346361%2C346460..346538%2C346634..346763%2C346845..346996%2C347100..347220%2C347297..347518);owner=coffea | |
| 44830 chr10 manual_curation exon 11311141 11311196 . - . Parent=GSCOCT00031434001 | |
| 44831 chr10 manual_curation exon 11312444 11312735 . - . Parent=GSCOCT00031434001 | |
| 44832 chr10 manual_curation exon 11312267 11312345 . - . Parent=GSCOCT00031434001 | |
| 44833 chr10 manual_curation exon 11312042 11312171 . - . Parent=GSCOCT00031434001 | |
| 44834 chr10 manual_curation exon 11311809 11311960 . - . Parent=GSCOCT00031434001 | |
| 44835 chr10 manual_curation exon 11311585 11311705 . - . Parent=GSCOCT00031434001 | |
| 44836 chr10 manual_curation exon 11311281 11311508 . - . Parent=GSCOCT00031434001 | |
| 44837 chr10 manual_curation CDS 11312444 11312735 . - 0 Parent=GSCOCT00031434001 | |
| 44838 chr10 manual_curation CDS 11312267 11312345 . - 1 Parent=GSCOCT00031434001 | |
| 44839 chr10 manual_curation CDS 11312042 11312171 . - 2 Parent=GSCOCT00031434001 | |
| 44840 chr10 manual_curation CDS 11311809 11311960 . - 0 Parent=GSCOCT00031434001 | |
| 44841 chr10 manual_curation CDS 11311585 11311705 . - 2 Parent=GSCOCT00031434001 | |
| 44842 chr10 manual_curation CDS 11311287 11311508 . - 0 Parent=GSCOCT00031434001 | |
| 44843 chr10 manual_curation gene 11344589 11346347 . + . ID=GSCOCG00031433001;Name=Cc10_g10280 | |
| 44844 chr10 manual_curation mRNA 11344589 11346347 . + . ID=GSCOCT00031433001;Parent=GSCOCG00031433001;Name=Cc10_g10280 | |
| 44845 chr10 manual_curation polypeptide 11344589 11346347 . + . ID=GSCOCP00031433001;Dbxref=InterPro:IPR004827,InterPro:IPR011616,PFAM:PF00170,SMART:SM00338,SwissProt:Q8W3M7,TAIR:AT1G35490.1,TAIR:AT1G58110.1,TAIR:AT4G06598.1,TrEMBL:A5B6S2,TrEMBL:B9T452,TrEMBL:I1K494;Derives_from=GSCOCT00031433001;Name=Cc10_g10280;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0043565,GO:0046983,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized protein At4g06598,CC_functional_completeness:modules,CC_gene:At4g06598;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031433001~ Putative Uncharacterized protein At4g06598~ At4g06598~ modules;original_location=complement(join(313770..314216%2C313522..313667%2C313325..313400%2C313076..313202%2C312458..312645));owner=coffea | |
| 44846 chr10 manual_curation exon 11346160 11346347 . + . Parent=GSCOCT00031433001 | |
| 44847 chr10 manual_curation exon 11345603 11345729 . + . Parent=GSCOCT00031433001 | |
| 44848 chr10 manual_curation exon 11345405 11345480 . + . Parent=GSCOCT00031433001 | |
| 44849 chr10 manual_curation exon 11345138 11345283 . + . Parent=GSCOCT00031433001 | |
| 44850 chr10 manual_curation exon 11344589 11345035 . + . Parent=GSCOCT00031433001 | |
| 44851 chr10 manual_curation CDS 11346160 11346347 . + 1 Parent=GSCOCT00031433001 | |
| 44852 chr10 manual_curation CDS 11345603 11345729 . + 0 Parent=GSCOCT00031433001 | |
| 44853 chr10 manual_curation CDS 11345405 11345480 . + 2 Parent=GSCOCT00031433001 | |
| 44854 chr10 manual_curation CDS 11345138 11345283 . + 0 Parent=GSCOCT00031433001 | |
| 44855 chr10 manual_curation CDS 11344589 11345035 . + 0 Parent=GSCOCT00031433001 | |
| 44856 chr10 manual_curation gene 11356823 11362778 . - . ID=GSCOCG00031432001;Name=Cc10_g10290 | |
| 44857 chr10 manual_curation mRNA 11356823 11362778 . - . ID=GSCOCT00031432001;Parent=GSCOCG00031432001;Name=Cc10_g10290 | |
| 44858 chr10 manual_curation polypeptide 11357145 11362544 . - . ID=GSCOCP00031432001;Dbxref=TAIR:AT4G27510.1,TrEMBL:B9H418,TrEMBL:B9SX39,TrEMBL:D7SS85;Derives_from=GSCOCT00031432001;Name=Cc10_g10290;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B Has 25 Blast hits to 23 proteins in 8 species,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031432001~ Putative unknown protein%3B Has 25 Blast hits to 23 proteins in 8 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 25%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(296261..296392%2C296933..297493%2C299450..300715%2C300802..300872%2C301315..301660);owner=coffea | |
| 44859 chr10 manual_curation exon 11362676 11362778 . - . Parent=GSCOCT00031432001 | |
| 44860 chr10 manual_curation exon 11362413 11362572 . - . Parent=GSCOCT00031432001 | |
| 44861 chr10 manual_curation exon 11361312 11361872 . - . Parent=GSCOCT00031432001 | |
| 44862 chr10 manual_curation exon 11358090 11359355 . - . Parent=GSCOCT00031432001 | |
| 44863 chr10 manual_curation exon 11357933 11358003 . - . Parent=GSCOCT00031432001 | |
| 44864 chr10 manual_curation exon 11356823 11357490 . - . Parent=GSCOCT00031432001 | |
| 44865 chr10 manual_curation CDS 11362413 11362544 . - 0 Parent=GSCOCT00031432001 | |
| 44866 chr10 manual_curation CDS 11361312 11361872 . - 0 Parent=GSCOCT00031432001 | |
| 44867 chr10 manual_curation CDS 11358090 11359355 . - 0 Parent=GSCOCT00031432001 | |
| 44868 chr10 manual_curation CDS 11357933 11358003 . - 0 Parent=GSCOCT00031432001 | |
| 44869 chr10 manual_curation CDS 11357145 11357490 . - 2 Parent=GSCOCT00031432001 | |
| 44870 chr10 manual_curation gene 11364823 11375524 . + . ID=GSCOCG00031430001;Name=Cc10_g10300 | |
| 44871 chr10 manual_curation mRNA 11364823 11375524 . + . ID=GSCOCT00031430001;Parent=GSCOCG00031430001;Name=Cc10_g10300 | |
| 44872 chr10 manual_curation polypeptide 11364967 11375274 . + . ID=GSCOCP00031430001;Dbxref=InterPro:IPR019378,PFAM:PF10250,SwissProt:Q8W486,TAIR:AT1G14970.1,TAIR:AT1G35510.1,TAIR:AT2G01480.1,TrEMBL:B9IQG3,TrEMBL:B9T5R6,TrEMBL:I1KFZ5;Derives_from=GSCOCT00031430001;Name=Cc10_g10300;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative DUF246 domain-containing protein At1g04910,CC_functional_completeness:complete,CC_gene:At1g04910;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031430001~ Putative DUF246 domain-containing protein At1g04910~ At1g04910~ complete;original_location=complement(join(293697..293838%2C293377..293627%2C292607..292679%2C291828..291895%2C291475..291563%2C290929..291126%2C287686..287890%2C287395..287562%2C284266..284433%2C283993..284183%2C283531..283699));owner=coffea | |
| 44873 chr10 manual_curation exon 11375106 11375524 . + . Parent=GSCOCT00031430001 | |
| 44874 chr10 manual_curation exon 11374622 11374812 . + . Parent=GSCOCT00031430001 | |
| 44875 chr10 manual_curation exon 11374372 11374539 . + . Parent=GSCOCT00031430001 | |
| 44876 chr10 manual_curation exon 11371243 11371410 . + . Parent=GSCOCT00031430001 | |
| 44877 chr10 manual_curation exon 11370915 11371119 . + . Parent=GSCOCT00031430001 | |
| 44878 chr10 manual_curation exon 11367679 11367876 . + . Parent=GSCOCT00031430001 | |
| 44879 chr10 manual_curation exon 11367242 11367330 . + . Parent=GSCOCT00031430001 | |
| 44880 chr10 manual_curation exon 11366910 11366977 . + . Parent=GSCOCT00031430001 | |
| 44881 chr10 manual_curation exon 11366126 11366198 . + . Parent=GSCOCT00031430001 | |
| 44882 chr10 manual_curation exon 11365178 11365428 . + . Parent=GSCOCT00031430001 | |
| 44883 chr10 manual_curation exon 11364823 11365108 . + . Parent=GSCOCT00031430001 | |
| 44884 chr10 manual_curation CDS 11375106 11375274 . + 2 Parent=GSCOCT00031430001 | |
| 44885 chr10 manual_curation CDS 11374622 11374812 . + 0 Parent=GSCOCT00031430001 | |
| 44886 chr10 manual_curation CDS 11374372 11374539 . + 0 Parent=GSCOCT00031430001 | |
| 44887 chr10 manual_curation CDS 11371243 11371410 . + 0 Parent=GSCOCT00031430001 | |
| 44888 chr10 manual_curation CDS 11370915 11371119 . + 2 Parent=GSCOCT00031430001 | |
| 44889 chr10 manual_curation CDS 11367679 11367876 . + 2 Parent=GSCOCT00031430001 | |
| 44890 chr10 manual_curation CDS 11367242 11367330 . + 0 Parent=GSCOCT00031430001 | |
| 44891 chr10 manual_curation CDS 11366910 11366977 . + 1 Parent=GSCOCT00031430001 | |
| 44892 chr10 manual_curation CDS 11366126 11366198 . + 0 Parent=GSCOCT00031430001 | |
| 44893 chr10 manual_curation CDS 11365178 11365428 . + 1 Parent=GSCOCT00031430001 | |
| 44894 chr10 manual_curation CDS 11364967 11365108 . + 0 Parent=GSCOCT00031430001 | |
| 44895 chr10 manual_curation gene 11384172 11386933 . + . ID=GSCOCG00031429001;Name=Cc10_g10310 | |
| 44896 chr10 manual_curation mRNA 11384172 11386933 . + . ID=GSCOCT00031429001;Parent=GSCOCG00031429001;Name=Cc10_g10310 | |
| 44897 chr10 manual_curation polypeptide 11384548 11386715 . + . ID=GSCOCP00031429001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001005,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR014778,InterPro:IPR015495,InterPro:IPR017930,PANTHER:PTHR10641,PFAM:PF00249,PROFILE:PS51294,SMART:SM00717,SUPERFAMILY:SSF46689,SwissProt:P81395,SwissProt:Q38851,SwissProt:Q9S9K9,TAIR:AT1G22640.1,TAIR:AT4G09460.1,TAIR:AT4G38620.1,TrEMBL:F8SPG8,TrEMBL:Q43436,TrEMBL:Q8H271;Derives_from=GSCOCT00031429001;Name=Cc10_g10310;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Myb-related protein 330,CC_functional_completeness:complete,CC_gene:MYB330,CC_gene:MYB6,CC_gene:MYB3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031429001~ Myb-related protein 330~ MYB330~ complete;original_location=complement(join(274125..274257%2C273856..273985%2C272090..272768));owner=coffea | |
| 44898 chr10 manual_curation exon 11386037 11386933 . + . Parent=GSCOCT00031429001 | |
| 44899 chr10 manual_curation exon 11384820 11384949 . + . Parent=GSCOCT00031429001 | |
| 44900 chr10 manual_curation exon 11384172 11384680 . + . Parent=GSCOCT00031429001 | |
| 44901 chr10 manual_curation CDS 11386037 11386715 . + 2 Parent=GSCOCT00031429001 | |
| 44902 chr10 manual_curation CDS 11384820 11384949 . + 1 Parent=GSCOCT00031429001 | |
| 44903 chr10 manual_curation CDS 11384548 11384680 . + 0 Parent=GSCOCT00031429001 | |
| 44904 chr10 manual_curation gene 11412949 11415552 . + . ID=GSCOCG00031428001;Name=Cc10_g10320 | |
| 44905 chr10 manual_curation mRNA 11412949 11415552 . + . ID=GSCOCT00031428001;Parent=GSCOCG00031428001;Name=Cc10_g10320 | |
| 44906 chr10 manual_curation polypeptide 11412949 11415346 . + . ID=GSCOCP00031428001;Dbxref=InterPro:IPR002283,InterPro:IPR005123,PFAM:PF03171,PRINTS:PR00682,SwissProt:Q39110,SwissProt:Q39111,SwissProt:Q39112,TAIR:AT4G25420.1,TAIR:AT5G07200.1,TAIR:AT5G51810.1,TrEMBL:A8S9X5,TrEMBL:B9H7K4,TrEMBL:F6H0G1;Derives_from=GSCOCT00031428001;Name=Cc10_g10320;Ontology_term=CC_evidence_code:ISS,GO:0005506,GO:0016491,GO:0055114,CC_EC_number:1.14.11.9,PRODUCT:Gibberellin 20 oxidase 3,CC_functional_completeness:complete,CC_gene:20ox3,CC_gene:20ox1,CC_gene:20ox2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031428001~ Gibberellin 20 oxidase 3~ 20ox3~ complete;original_location=complement(join(245345..245856%2C244560..244881%2C243459..243728));owner=coffea | |
| 44907 chr10 manual_curation exon 11415077 11415552 . + . Parent=GSCOCT00031428001 | |
| 44908 chr10 manual_curation exon 11413924 11414245 . + . Parent=GSCOCT00031428001 | |
| 44909 chr10 manual_curation exon 11412949 11413460 . + . Parent=GSCOCT00031428001 | |
| 44910 chr10 manual_curation CDS 11415077 11415346 . + 0 Parent=GSCOCT00031428001 | |
| 44911 chr10 manual_curation CDS 11413924 11414245 . + 2 Parent=GSCOCT00031428001 | |
| 44912 chr10 manual_curation CDS 11412949 11413460 . + 0 Parent=GSCOCT00031428001 | |
| 44913 chr10 manual_curation gene 11483303 11489065 . + . ID=GSCOCG00031427001;Name=Cc10_g10330 | |
| 44914 chr10 manual_curation mRNA 11483303 11489065 . + . ID=GSCOCT00031427001;Parent=GSCOCG00031427001;Name=Cc10_g10330 | |
| 44915 chr10 manual_curation polypeptide 11483303 11488793 . + . ID=GSCOCP00031427001;Dbxref=InterPro:IPR021325,PFAM:PF11152,TAIR:AT5G52110.1,TrEMBL:B9ID30,TrEMBL:B9R9G3,TrEMBL:F6HP63;Derives_from=GSCOCT00031427001;Name=Cc10_g10330;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF2930),CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031427001~ Protein of unknown function (DUF2930)~ unknown_gene~ modules;original_location=complement(join(175250..175502%2C175041..175159%2C174823..174894%2C173914..174057%2C173575..173728%2C172955..173140%2C170012..170028));owner=coffea | |
| 44916 chr10 manual_curation exon 11488777 11489065 . + . Parent=GSCOCT00031427001 | |
| 44917 chr10 manual_curation exon 11485665 11485850 . + . Parent=GSCOCT00031427001 | |
| 44918 chr10 manual_curation exon 11485077 11485230 . + . Parent=GSCOCT00031427001 | |
| 44919 chr10 manual_curation exon 11484748 11484891 . + . Parent=GSCOCT00031427001 | |
| 44920 chr10 manual_curation exon 11483911 11483982 . + . Parent=GSCOCT00031427001 | |
| 44921 chr10 manual_curation exon 11483646 11483764 . + . Parent=GSCOCT00031427001 | |
| 44922 chr10 manual_curation exon 11483303 11483555 . + . Parent=GSCOCT00031427001 | |
| 44923 chr10 manual_curation CDS 11488777 11488793 . + 1 Parent=GSCOCT00031427001 | |
| 44924 chr10 manual_curation CDS 11485665 11485850 . + 1 Parent=GSCOCT00031427001 | |
| 44925 chr10 manual_curation CDS 11485077 11485230 . + 0 Parent=GSCOCT00031427001 | |
| 44926 chr10 manual_curation CDS 11484748 11484891 . + 0 Parent=GSCOCT00031427001 | |
| 44927 chr10 manual_curation CDS 11483911 11483982 . + 0 Parent=GSCOCT00031427001 | |
| 44928 chr10 manual_curation CDS 11483646 11483764 . + 1 Parent=GSCOCT00031427001 | |
| 44929 chr10 manual_curation CDS 11483303 11483555 . + 0 Parent=GSCOCT00031427001 | |
| 44930 chr10 manual_curation gene 11489273 11491823 . - . ID=GSCOCG00031426001;Name=Cc10_g10340 | |
| 44931 chr10 manual_curation mRNA 11489273 11491823 . - . ID=GSCOCT00031426001;Parent=GSCOCG00031426001;Name=Cc10_g10340 | |
| 44932 chr10 manual_curation polypeptide 11490120 11491601 . - . ID=GSCOCP00031426001;Dbxref=InterPro:IPR003103,InterPro:IPR019955,PFAM:PF02179,PROFILE:PS50053,PROFILE:PS51035,SMART:SM00264,SwissProt:Q0WPX7,SwissProt:Q0WUQ1,SwissProt:Q9LYP4,TAIR:AT5G07220.1,TAIR:AT5G52060.1,TAIR:AT5G62100.1,TrEMBL:B9I4G2,TrEMBL:B9ID06,TrEMBL:B9R9G5;Derives_from=GSCOCT00031426001;Name=Cc10_g10340;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0006915,CC_EC_number:missing_EC_number,PRODUCT:BAG family molecular chaperone regulator 1,CC_functional_completeness:complete,CC_gene:BAG1,CC_gene:BAG3,CC_gene:BAG2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031426001~ BAG family molecular chaperone regulator 1~ BAG1~ complete;original_location=join(167204..167453%2C167568..167824%2C168001..168153%2C168266..168685);owner=coffea | |
| 44933 chr10 manual_curation exon 11491352 11491823 . - . Parent=GSCOCT00031426001 | |
| 44934 chr10 manual_curation exon 11490981 11491237 . - . Parent=GSCOCT00031426001 | |
| 44935 chr10 manual_curation exon 11490652 11490804 . - . Parent=GSCOCT00031426001 | |
| 44936 chr10 manual_curation exon 11489273 11490539 . - . Parent=GSCOCT00031426001 | |
| 44937 chr10 manual_curation CDS 11491352 11491601 . - 0 Parent=GSCOCT00031426001 | |
| 44938 chr10 manual_curation CDS 11490981 11491237 . - 1 Parent=GSCOCT00031426001 | |
| 44939 chr10 manual_curation CDS 11490652 11490804 . - 0 Parent=GSCOCT00031426001 | |
| 44940 chr10 manual_curation CDS 11490120 11490539 . - 0 Parent=GSCOCT00031426001 | |
| 44941 chr10 manual_curation gene 11619954 11621054 . + . ID=GSCOCG00031425001;Name=Cc10_g10350 | |
| 44942 chr10 manual_curation mRNA 11619954 11621054 . + . ID=GSCOCT00031425001;Parent=GSCOCG00031425001;Name=Cc10_g10350 | |
| 44943 chr10 manual_curation polypeptide 11619954 11621054 . + . ID=GSCOCP00031425001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR020635,PFAM:PF07714,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q9LMN6,SwissProt:Q9LMN7,SwissProt:Q9LMN8,TAIR:AT1G21210.1,TAIR:AT1G21230.1,TAIR:AT1G21240.1,TrEMBL:B9S2R0,TrEMBL:F6GSN9,TrEMBL:F6H0F7;Derives_from=GSCOCT00031425001;Name=Cc10_g10350;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Wall-associated receptor kinase 5,CC_functional_completeness:fragment,CC_gene:WAK5,CC_gene:WAK3,CC_gene:WAK4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031425001~ Wall-associated receptor kinase 5~ WAK5~ fragment;original_location=complement(37751..38851);owner=coffea | |
| 44944 chr10 manual_curation exon 11619954 11621054 . + . Parent=GSCOCT00031425001 | |
| 44945 chr10 manual_curation CDS 11619954 11621054 . + 0 Parent=GSCOCT00031425001 | |
| 44946 chr10 manual_curation gene 11623766 11627927 . + . ID=GSCOCG00031423001;Name=Cc10_g10360 | |
| 44947 chr10 manual_curation mRNA 11623766 11627927 . + . ID=GSCOCT00031423001;Parent=GSCOCG00031423001;Name=Cc10_g10360 | |
| 44948 chr10 manual_curation polypeptide 11623943 11627927 . + . ID=GSCOCP00031423001;Dbxref=InterPro:IPR000152,InterPro:IPR000719,InterPro:IPR000742,InterPro:IPR001881,InterPro:IPR002290,InterPro:IPR006210,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR013091,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR018097,InterPro:IPR020635,PFAM:PF00069,PFAM:PF07645,PROFILE:PS50011,PROFILE:PS50026,PROSITE:PS00010,PROSITE:PS00107,PROSITE:PS00108,PROSITE:PS01187,SMART:SM00179,SMART:SM00181,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q9LMN7,SwissProt:Q9LMN8,SwissProt:Q9LMP1,TAIR:AT1G21230.1,TAIR:AT1G21240.1,TAIR:AT1G21270.1,TrEMBL:B9S2R0,TrEMBL:F6GSN9,TrEMBL:F6H0G0;Derives_from=GSCOCT00031423001;Name=Cc10_g10360;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005509,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Wall-associated receptor kinase 2,CC_functional_completeness:complete,CC_gene:WAK2,CC_gene:WAK3,CC_gene:WAK5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031423001~ Putative Wall-associated receptor kinase 2~ WAK2~ complete;original_location=complement(join(34007..34862%2C33249..33437%2C30878..32085));owner=coffea | |
| 44949 chr10 manual_curation exon 11626720 11627927 . + . Parent=GSCOCT00031423001 | |
| 44950 chr10 manual_curation exon 11625368 11625556 . + . Parent=GSCOCT00031423001 | |
| 44951 chr10 manual_curation exon 11623766 11624798 . + . Parent=GSCOCT00031423001 | |
| 44952 chr10 manual_curation CDS 11626720 11627927 . + 1 Parent=GSCOCT00031423001 | |
| 44953 chr10 manual_curation CDS 11625368 11625556 . + 1 Parent=GSCOCT00031423001 | |
| 44954 chr10 manual_curation CDS 11623943 11624798 . + 0 Parent=GSCOCT00031423001 | |
| 44955 chr10 manual_curation gene 11712645 11715375 . + . ID=GSCOCG00010104001;Name=Cc10_g10370 | |
| 44956 chr10 manual_curation mRNA 11712645 11715375 . + . ID=GSCOCT00010104001;Parent=GSCOCG00010104001;Name=Cc10_g10370 | |
| 44957 chr10 manual_curation polypeptide 11712932 11715085 . + . ID=GSCOCP00010104001;Dbxref=InterPro:IPR009020,InterPro:IPR010259,InterPro:IPR015500,PANTHER:PTHR10795,PFAM:PF05922,SUPERFAMILY:SSF54897,TAIR:AT1G32940.1,TAIR:AT1G66220.1,TAIR:AT1G71950.1,TrEMBL:B9SLE5,TrEMBL:O65757,TrEMBL:Q40540;Derives_from=GSCOCT00010104001;Name=Cc10_g10370;Ontology_term=CC_evidence_code:ISS,GO:0004252,GO:0042802,GO:0043086,CC_EC_number:missing_EC_number,PRODUCT:Proteinase inhibitor%2C propeptide,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00010104001~ Proteinase inhibitor%2C propeptide~ unknown_gene~ fragment;original_location=join(30364..30485%2C30683..30780%2C32441..32517);owner=coffea | |
| 44958 chr10 manual_curation exon 11712645 11713053 . + . Parent=GSCOCT00010104001 | |
| 44959 chr10 manual_curation exon 11713251 11713348 . + . Parent=GSCOCT00010104001 | |
| 44960 chr10 manual_curation exon 11715009 11715375 . + . Parent=GSCOCT00010104001 | |
| 44961 chr10 manual_curation CDS 11712932 11713053 . + 0 Parent=GSCOCT00010104001 | |
| 44962 chr10 manual_curation CDS 11713251 11713348 . + 2 Parent=GSCOCT00010104001 | |
| 44963 chr10 manual_curation CDS 11715009 11715085 . + 1 Parent=GSCOCT00010104001 | |
| 44964 chr10 manual_curation gene 11716844 11722236 . + . ID=GSCOCG00010105001;Name=Cc10_g10380 | |
| 44965 chr10 manual_curation mRNA 11716844 11722236 . + . ID=GSCOCT00010105001;Parent=GSCOCG00010105001;Name=Cc10_g10380 | |
| 44966 chr10 manual_curation polypeptide 11716844 11722059 . + . ID=GSCOCP00010105001;Dbxref=GENE3D:G3DSA:1.10.238.10,InterPro:IPR000719,InterPro:IPR002048,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR011992,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR018247,InterPro:IPR018248,InterPro:IPR018249,InterPro:IPR020635,InterPro:IPR020636,InterPro:IPR020642,PANTHER:PTHR22982,PANTHER:PTHR22982:SF13,PFAM:PF00036,PFAM:PF00069,PROFILE:PS50011,PROFILE:PS50222,PROSITE:PS00018,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00054,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:P28583,SwissProt:Q38869,SwissProt:Q39016,TAIR:AT1G35670.1,TAIR:AT4G09570.1,TAIR:AT5G23580.1,TrEMBL:B9SLE6,TrEMBL:F6GY07,TrEMBL:H6UM40;Derives_from=GSCOCT00010105001;Name=Cc10_g10380;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005509,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.17,PRODUCT:Calcium-dependent protein kinase 11,CC_functional_completeness:complete,CC_gene:CPK11,CC_gene:CPK4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00010105001~ Calcium-dependent protein kinase 11~ CPK11~ complete;original_location=join(34276..34816%2C36135..36278%2C36415..36567%2C36648..36763%2C38154..38321%2C38453..38677%2C39357..39491);owner=coffea | |
| 44967 chr10 manual_curation exon 11716844 11717384 . + . Parent=GSCOCT00010105001 | |
| 44968 chr10 manual_curation exon 11718703 11718846 . + . Parent=GSCOCT00010105001 | |
| 44969 chr10 manual_curation exon 11718983 11719135 . + . Parent=GSCOCT00010105001 | |
| 44970 chr10 manual_curation exon 11719216 11719331 . + . Parent=GSCOCT00010105001 | |
| 44971 chr10 manual_curation exon 11720722 11720889 . + . Parent=GSCOCT00010105001 | |
| 44972 chr10 manual_curation exon 11721021 11721245 . + . Parent=GSCOCT00010105001 | |
| 44973 chr10 manual_curation exon 11721925 11722236 . + . Parent=GSCOCT00010105001 | |
| 44974 chr10 manual_curation CDS 11716844 11717384 . + 0 Parent=GSCOCT00010105001 | |
| 44975 chr10 manual_curation CDS 11718703 11718846 . + 1 Parent=GSCOCT00010105001 | |
| 44976 chr10 manual_curation CDS 11718983 11719135 . + 1 Parent=GSCOCT00010105001 | |
| 44977 chr10 manual_curation CDS 11719216 11719331 . + 1 Parent=GSCOCT00010105001 | |
| 44978 chr10 manual_curation CDS 11720722 11720889 . + 0 Parent=GSCOCT00010105001 | |
| 44979 chr10 manual_curation CDS 11721021 11721245 . + 0 Parent=GSCOCT00010105001 | |
| 44980 chr10 manual_curation CDS 11721925 11722059 . + 0 Parent=GSCOCT00010105001 | |
| 44981 chr10 manual_curation gene 11737902 11740877 . + . ID=GSCOCG00010106001;Name=Cc10_g10390 | |
| 44982 chr10 manual_curation mRNA 11737902 11740877 . + . ID=GSCOCT00010106001;Parent=GSCOCG00010106001;Name=Cc10_g10390 | |
| 44983 chr10 manual_curation polypeptide 11737902 11740877 . + . ID=GSCOCP00010106001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,SwissProt:Q2V6K0,SwissProt:Q66PF3,SwissProt:Q9LSY9,TAIR:AT3G21750.1,TAIR:AT3G21760.1,TAIR:AT3G21790.1,TrEMBL:A5BGZ9,TrEMBL:F8WKX0,TrEMBL:Q8RU72;Derives_from=GSCOCT00010106001;Name=Cc10_g10390;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:missing_EC_number,PRODUCT:Putative UDP-glucose flavonoid 3-O-glucosyltransferase 6,CC_functional_completeness:fragment,CC_gene:GT6,CC_gene:GT3,CC_gene:UGT71B1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00010106001~ Putative UDP-glucose flavonoid 3-O-glucosyltransferase 6~ GT6~ fragment;original_location=join(55334..55381%2C55446..55704%2C56222..56286%2C58190..58309);owner=coffea | |
| 44984 chr10 manual_curation exon 11737902 11737949 . + . Parent=GSCOCT00010106001 | |
| 44985 chr10 manual_curation exon 11738014 11738272 . + . Parent=GSCOCT00010106001 | |
| 44986 chr10 manual_curation exon 11738790 11738854 . + . Parent=GSCOCT00010106001 | |
| 44987 chr10 manual_curation exon 11740758 11740877 . + . Parent=GSCOCT00010106001 | |
| 44988 chr10 manual_curation CDS 11737902 11737949 . + 0 Parent=GSCOCT00010106001 | |
| 44989 chr10 manual_curation CDS 11738014 11738272 . + 0 Parent=GSCOCT00010106001 | |
| 44990 chr10 manual_curation CDS 11738790 11738854 . + 1 Parent=GSCOCT00010106001 | |
| 44991 chr10 manual_curation CDS 11740758 11740877 . + 0 Parent=GSCOCT00010106001 | |
| 44992 chr10 manual_curation gene 11777972 11779579 . + . ID=GSCOCG00010109001;Name=Cc10_g10400 | |
| 44993 chr10 manual_curation mRNA 11777972 11779579 . + . ID=GSCOCT00010109001;Parent=GSCOCG00010109001;Name=Cc10_g10400 | |
| 44994 chr10 manual_curation polypeptide 11777972 11779579 . + . ID=GSCOCP00010109001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,SwissProt:Q40284,SwissProt:Q9LSY8,SwissProt:Q9LSY9,TAIR:AT3G21750.1,TAIR:AT3G21760.1,TAIR:AT3G21800.1,TrEMBL:B9HCE6,TrEMBL:F6H1Q6,TrEMBL:I1JJV1;Derives_from=GSCOCT00010109001;Name=Cc10_g10400;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:Anthocyanidin 3-O-glucosyltransferase 1,CC_functional_completeness:fragment,CC_gene:GT1,CC_gene:UGT71B1,CC_gene:UGT71B2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00010109001~ Anthocyanidin 3-O-glucosyltransferase 1~ GT1~ fragment;original_location=join(95404..95440%2C95975..95989%2C96043..96090%2C96698..97011);owner=coffea | |
| 44995 chr10 manual_curation exon 11777972 11778008 . + . Parent=GSCOCT00010109001 | |
| 44996 chr10 manual_curation exon 11778543 11778557 . + . Parent=GSCOCT00010109001 | |
| 44997 chr10 manual_curation exon 11778611 11778658 . + . Parent=GSCOCT00010109001 | |
| 44998 chr10 manual_curation exon 11779266 11779579 . + . Parent=GSCOCT00010109001 | |
| 44999 chr10 manual_curation CDS 11777972 11778008 . + 0 Parent=GSCOCT00010109001 | |
| 45000 chr10 manual_curation CDS 11778543 11778557 . + 1 Parent=GSCOCT00010109001 | |
| 45001 chr10 manual_curation CDS 11778611 11778658 . + 1 Parent=GSCOCT00010109001 | |
| 45002 chr10 manual_curation CDS 11779266 11779579 . + 1 Parent=GSCOCT00010109001 | |
| 45003 chr10 manual_curation gene 12301777 12303186 . - . ID=GSCOCG00010112001;Name=Cc10_g10410 | |
| 45004 chr10 manual_curation mRNA 12301777 12303186 . - . ID=GSCOCT00010112001;Parent=GSCOCG00010112001;Name=Cc10_g10410 | |
| 45005 chr10 manual_curation polypeptide 12301777 12303186 . - . ID=GSCOCP00010112001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,PROSITE:PS00375,SwissProt:Q2V6K0,SwissProt:Q40284,SwissProt:Q66PF3,TAIR:AT3G21750.1,TAIR:AT3G21760.1,TAIR:AT3G21790.1,TrEMBL:A7M6K3,TrEMBL:D2KY83,TrEMBL:Q6F4D6;Derives_from=GSCOCT00010112001;Name=Cc10_g10410;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:Putative UDP-glucose flavonoid 3-O-glucosyltransferase 3,CC_functional_completeness:complete,CC_gene:GT3,CC_gene:GT6,CC_gene:GT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00010112001~ Putative UDP-glucose flavonoid 3-O-glucosyltransferase 3~ GT3~ complete;original_location=complement(619209..620618);owner=coffea | |
| 45006 chr10 manual_curation exon 12301777 12303186 . - . Parent=GSCOCT00010112001 | |
| 45007 chr10 manual_curation CDS 12301777 12303186 . - 0 Parent=GSCOCT00010112001 | |
| 45008 chr10 manual_curation gene 12304036 12311840 . - . ID=GSCOCG00010113001;Name=Cc10_g10420 | |
| 45009 chr10 manual_curation mRNA 12304036 12311840 . - . ID=GSCOCT00010113001;Parent=GSCOCG00010113001;Name=Cc10_g10420 | |
| 45010 chr10 manual_curation polypeptide 12304612 12311840 . - . ID=GSCOCP00010113001;Dbxref=InterPro:IPR015414,PFAM:PF09335,SwissProt:Q8L586,SwissProt:Q8MXN7,SwissProt:Q9VX39,TAIR:AT1G71940.2,TAIR:AT4G09580.1,TAIR:AT4G17790.1,TrEMBL:B9IQJ1,TrEMBL:B9MW80,TrEMBL:D7SR92;Derives_from=GSCOCT00010113001;Name=Cc10_g10420;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterized membrane protein At4g09580,CC_functional_completeness:modules,CC_gene:At4g09580,CC_gene:DDB_G0275543,CC_gene:CG8408;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00010113001~ Uncharacterized membrane protein At4g09580~ At4g09580~ modules;original_location=complement(join(629209..629272%2C626396..626563%2C625871..626231%2C623355..623625%2C623094..623264%2C622044..622175));owner=coffea | |
| 45011 chr10 manual_curation exon 12304036 12304743 . - . Parent=GSCOCT00010113001 | |
| 45012 chr10 manual_curation exon 12305662 12305832 . - . Parent=GSCOCT00010113001 | |
| 45013 chr10 manual_curation exon 12305923 12306193 . - . Parent=GSCOCT00010113001 | |
| 45014 chr10 manual_curation exon 12308439 12308799 . - . Parent=GSCOCT00010113001 | |
| 45015 chr10 manual_curation exon 12308964 12309131 . - . Parent=GSCOCT00010113001 | |
| 45016 chr10 manual_curation exon 12311777 12311840 . - . Parent=GSCOCT00010113001 | |
| 45017 chr10 manual_curation CDS 12304612 12304743 . - 0 Parent=GSCOCT00010113001 | |
| 45018 chr10 manual_curation CDS 12305662 12305832 . - 0 Parent=GSCOCT00010113001 | |
| 45019 chr10 manual_curation CDS 12305923 12306193 . - 2 Parent=GSCOCT00010113001 | |
| 45020 chr10 manual_curation CDS 12308439 12308799 . - 1 Parent=GSCOCT00010113001 | |
| 45021 chr10 manual_curation CDS 12308964 12309131 . - 1 Parent=GSCOCT00010113001 | |
| 45022 chr10 manual_curation CDS 12311777 12311840 . - 0 Parent=GSCOCT00010113001 | |
| 45023 chr10 manual_curation gene 12317344 12317796 . - . ID=GSCOCG00010114001;Name=Cc10_g10430 | |
| 45024 chr10 manual_curation mRNA 12317344 12317796 . - . ID=GSCOCT00010114001;Parent=GSCOCG00010114001;Name=Cc10_g10430 | |
| 45025 chr10 manual_curation polypeptide 12317344 12317796 . - . ID=GSCOCP00010114001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR001976,InterPro:IPR012677,PANTHER:PTHR10496,PFAM:PF01282,PRODOM:PD006052,SwissProt:Q8LC83,SwissProt:Q962Q6,SwissProt:Q9SS17,TAIR:AT3G04920.1,TAIR:AT5G28060.1,TrEMBL:A5BH65,TrEMBL:B7FMK4,TrEMBL:E5GBS0;Derives_from=GSCOCT00010114001;Name=Cc10_g10430;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:40S ribosomal protein S24-2,CC_functional_completeness:complete,CC_gene:RPS24B,CC_gene:RPS24A,CC_gene:RpS24;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00010114001~ 40S ribosomal protein S24-2~ RPS24B~ complete;original_location=complement(634776..635228);owner=coffea | |
| 45026 chr10 manual_curation exon 12317344 12317796 . - . Parent=GSCOCT00010114001 | |
| 45027 chr10 manual_curation CDS 12317344 12317796 . - 0 Parent=GSCOCT00010114001 | |
| 45028 chr10 manual_curation gene 12336380 12344424 . - . ID=GSCOCG00007963001;Name=Cc10_g10440 | |
| 45029 chr10 manual_curation mRNA 12336380 12344424 . - . ID=GSCOCT00007963001;Parent=GSCOCG00007963001;Name=Cc10_g10440 | |
| 45030 chr10 manual_curation polypeptide 12336380 12344252 . - . ID=GSCOCP00007963001;Dbxref=InterPro:IPR007919,PANTHER:PTHR13180,PFAM:PF05255,TAIR:AT1G36980.1,TrEMBL:A5AVM4;Derives_from=GSCOCT00007963001;Name=Cc10_g10440;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B CONTAINS InterPro DOMAIN/s,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00007963001~ unknown protein%3B CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0220 (InterPro:IPR007919)%3B Has 424 Blast hits to 424 proteins in 159 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 228%3B Fungi - 120%3B Plants - 62%3B Viruses - 0%3B Other Eukaryotes - 14 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(17129..17245%2C16898..16998%2C9373..9529));owner=coffea | |
| 45031 chr10 manual_curation exon 12336380 12336536 . - . Parent=GSCOCT00007963001 | |
| 45032 chr10 manual_curation exon 12343905 12344005 . - . Parent=GSCOCT00007963001 | |
| 45033 chr10 manual_curation exon 12344136 12344424 . - . Parent=GSCOCT00007963001 | |
| 45034 chr10 manual_curation CDS 12336380 12336536 . - 2 Parent=GSCOCT00007963001 | |
| 45035 chr10 manual_curation CDS 12343905 12344005 . - 0 Parent=GSCOCT00007963001 | |
| 45036 chr10 manual_curation CDS 12344136 12344252 . - 0 Parent=GSCOCT00007963001 | |
| 45037 chr10 manual_curation gene 12403292 12407992 . - . ID=GSCOCG00035969001;Name=Cc10_g10450 | |
| 45038 chr10 manual_curation mRNA 12403292 12407992 . - . ID=GSCOCT00035969001;Parent=GSCOCG00035969001;Name=Cc10_g10450 | |
| 45039 chr10 manual_curation polypeptide 12403292 12407992 . - . ID=GSCOCP00035969001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:C0LGP4,SwissProt:C0LGT6,SwissProt:Q9FL28,TAIR:AT3G47090.1,TAIR:AT3G47570.1,TAIR:AT3G47580.1,TrEMBL:B9SM56,TrEMBL:F6HLX8,TrEMBL:F6HP05;Derives_from=GSCOCT00035969001;Name=Cc10_g10450;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570,CC_functional_completeness:complete,CC_gene:At3g47570,CC_gene:FLS2,CC_gene:EFR;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035969001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570~ At3g47570~ complete;original_location=complement(join(27150..27559%2C26716..27080%2C26357..26455%2C24686..25429%2C23342..24619%2C22859..23220));owner=coffea | |
| 45040 chr10 manual_curation exon 12403292 12403653 . - . Parent=GSCOCT00035969001 | |
| 45041 chr10 manual_curation exon 12403775 12405052 . - . Parent=GSCOCT00035969001 | |
| 45042 chr10 manual_curation exon 12405119 12405862 . - . Parent=GSCOCT00035969001 | |
| 45043 chr10 manual_curation exon 12406790 12406888 . - . Parent=GSCOCT00035969001 | |
| 45044 chr10 manual_curation exon 12407149 12407513 . - . Parent=GSCOCT00035969001 | |
| 45045 chr10 manual_curation exon 12407583 12407992 . - . Parent=GSCOCT00035969001 | |
| 45046 chr10 manual_curation CDS 12403292 12403653 . - 1 Parent=GSCOCT00035969001 | |
| 45047 chr10 manual_curation CDS 12403775 12405052 . - 1 Parent=GSCOCT00035969001 | |
| 45048 chr10 manual_curation CDS 12405119 12405862 . - 1 Parent=GSCOCT00035969001 | |
| 45049 chr10 manual_curation CDS 12406790 12406888 . - 1 Parent=GSCOCT00035969001 | |
| 45050 chr10 manual_curation CDS 12407149 12407513 . - 2 Parent=GSCOCT00035969001 | |
| 45051 chr10 manual_curation CDS 12407583 12407992 . - 0 Parent=GSCOCT00035969001 | |
| 45052 chr10 manual_curation gene 12610287 12611775 . + . ID=GSCOCG00035973001;Name=Cc10_g10460 | |
| 45053 chr10 manual_curation mRNA 12610287 12611775 . + . ID=GSCOCT00035973001;Parent=GSCOCG00035973001;Name=Cc10_g10460 | |
| 45054 chr10 manual_curation polypeptide 12611560 12611775 . + . ID=GSCOCP00035973001;Derives_from=GSCOCT00035973001;Name=Cc10_g10460;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035973001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=231127..231342;owner=coffea | |
| 45055 chr10 manual_curation exon 12610287 12610860 . + . Parent=GSCOCT00035973001 | |
| 45056 chr10 manual_curation exon 12610902 12611775 . + . Parent=GSCOCT00035973001 | |
| 45057 chr10 manual_curation CDS 12611560 12611775 . + 0 Parent=GSCOCT00035973001 | |
| 45058 chr10 manual_curation gene 12619360 12620028 . + . ID=GSCOCG00035974001;Name=Cc10_g10470 | |
| 45059 chr10 manual_curation mRNA 12619360 12620028 . + . ID=GSCOCT00035974001;Parent=GSCOCG00035974001;Name=Cc10_g10470 | |
| 45060 chr10 manual_curation polypeptide 12619360 12620028 . + . ID=GSCOCP00035974001;Dbxref=InterPro:IPR007770,PFAM:PF05078,TAIR:AT3G02430.1,TAIR:AT4G18425.1,TAIR:AT5G46090.1,TrEMBL:A2Q514,TrEMBL:B9N3J9,TrEMBL:I1KLP9;Derives_from=GSCOCT00035974001;Name=Cc10_g10470;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF679),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035974001~ Protein of unknown function (DUF679)~ unknown_gene~ complete;original_location=238927..239595;owner=coffea | |
| 45061 chr10 manual_curation exon 12619360 12620028 . + . Parent=GSCOCT00035974001 | |
| 45062 chr10 manual_curation CDS 12619360 12620028 . + 0 Parent=GSCOCT00035974001 | |
| 45063 chr10 manual_curation gene 12640839 12644516 . + . ID=GSCOCG00035976001;Name=Cc10_g10480 | |
| 45064 chr10 manual_curation mRNA 12640839 12644516 . + . ID=GSCOCT00035976001;Parent=GSCOCG00035976001;Name=Cc10_g10480 | |
| 45065 chr10 manual_curation polypeptide 12640839 12643658 . + . ID=GSCOCP00035976001;Derives_from=GSCOCT00035976001;Name=Cc10_g10480;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035976001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(260406..260443%2C261975..262030%2C262891..263031%2C263119..263225);owner=coffea | |
| 45066 chr10 manual_curation exon 12640839 12640876 . + . Parent=GSCOCT00035976001 | |
| 45067 chr10 manual_curation exon 12642408 12642463 . + . Parent=GSCOCT00035976001 | |
| 45068 chr10 manual_curation exon 12643324 12643464 . + . Parent=GSCOCT00035976001 | |
| 45069 chr10 manual_curation exon 12643552 12644516 . + . Parent=GSCOCT00035976001 | |
| 45070 chr10 manual_curation CDS 12640839 12640876 . + 0 Parent=GSCOCT00035976001 | |
| 45071 chr10 manual_curation CDS 12642408 12642463 . + 2 Parent=GSCOCT00035976001 | |
| 45072 chr10 manual_curation CDS 12643324 12643464 . + 1 Parent=GSCOCT00035976001 | |
| 45073 chr10 manual_curation CDS 12643552 12643658 . + 1 Parent=GSCOCT00035976001 | |
| 45074 chr10 manual_curation gene 12650326 12651022 . + . ID=GSCOCG00035977001;Name=Cc10_g10490 | |
| 45075 chr10 manual_curation mRNA 12650326 12651022 . + . ID=GSCOCT00035977001;Parent=GSCOCG00035977001;Name=Cc10_g10490 | |
| 45076 chr10 manual_curation polypeptide 12650326 12651022 . + . ID=GSCOCP00035977001;Dbxref=GENE3D:G3DSA:3.30.565.10,InterPro:IPR001404,InterPro:IPR003594,InterPro:IPR020575,PANTHER:PTHR11528,PRINTS:PR00775,SUPERFAMILY:SSF55874,SwissProt:A8M4S6,SwissProt:Q1CZI7,SwissProt:Q2JGG1,TAIR:AT2G04030.1,TAIR:AT3G07770.1,TAIR:AT4G24190.1,TrEMBL:B9HIV4,TrEMBL:B9TA46,TrEMBL:I1J675;Derives_from=GSCOCT00035977001;Name=Cc10_g10490;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006457,GO:0006950,GO:0051082,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:htpG;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035977001~ Hypothetical protein~ htpG~ missing_functional_completeness;original_location=join(269893..269955%2C270010..270053%2C270320..270444%2C270528..270589);owner=coffea | |
| 45077 chr10 manual_curation exon 12650326 12650388 . + . Parent=GSCOCT00035977001 | |
| 45078 chr10 manual_curation exon 12650443 12650486 . + . Parent=GSCOCT00035977001 | |
| 45079 chr10 manual_curation exon 12650753 12650877 . + . Parent=GSCOCT00035977001 | |
| 45080 chr10 manual_curation exon 12650961 12651022 . + . Parent=GSCOCT00035977001 | |
| 45081 chr10 manual_curation CDS 12650326 12650388 . + 0 Parent=GSCOCT00035977001 | |
| 45082 chr10 manual_curation CDS 12650443 12650486 . + 0 Parent=GSCOCT00035977001 | |
| 45083 chr10 manual_curation CDS 12650753 12650877 . + 2 Parent=GSCOCT00035977001 | |
| 45084 chr10 manual_curation CDS 12650961 12651022 . + 1 Parent=GSCOCT00035977001 | |
| 45085 chr10 manual_curation gene 12995453 13000115 . - . ID=GSCOCG00035985001;Name=Cc10_g10500 | |
| 45086 chr10 manual_curation mRNA 12995453 13000115 . - . ID=GSCOCT00035985001;Parent=GSCOCG00035985001;Name=Cc10_g10500 | |
| 45087 chr10 manual_curation polypeptide 12995755 12999807 . - . ID=GSCOCP00035985001;Dbxref=InterPro:IPR002498,InterPro:IPR003409,InterPro:IPR016034,InterPro:IPR017163,PANTHER:PTHR23086,PFAM:PF01504,PFAM:PF02493,PIR:PIRSF037274,PROFILE:PS51455,SMART:SM00330,SMART:SM00698,SwissProt:O48709,SwissProt:Q56YP2,SwissProt:Q8L796,TAIR:AT1G21980.1,TAIR:AT1G77740.1,TAIR:AT2G26420.1,TrEMBL:B9H7A5,TrEMBL:F6H0M1,TrEMBL:Q9LLS0;Derives_from=GSCOCT00035985001;Name=Cc10_g10500;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0016307,GO:0016308,GO:0046488,CC_EC_number:2.7.1.68,PRODUCT:Phosphatidylinositol 4-phosphate 5-kinase 2,CC_functional_completeness:complete,CC_gene:PIP5K2,CC_gene:PIP5K1,CC_gene:PIP5K3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035985001~ Phosphatidylinositol 4-phosphate 5-kinase 2~ PIP5K2~ complete;original_location=complement(join(619164..619374%2C618514..619070%2C618044..618369%2C617783..617947%2C617453..617618%2C617130..617240%2C616842..617035%2C616624..616754%2C616442..616535%2C615322..615610));owner=coffea | |
| 45088 chr10 manual_curation exon 12995453 12996043 . - . Parent=GSCOCT00035985001 | |
| 45089 chr10 manual_curation exon 12996875 12996968 . - . Parent=GSCOCT00035985001 | |
| 45090 chr10 manual_curation exon 12997057 12997187 . - . Parent=GSCOCT00035985001 | |
| 45091 chr10 manual_curation exon 12997275 12997468 . - . Parent=GSCOCT00035985001 | |
| 45092 chr10 manual_curation exon 12997563 12997673 . - . Parent=GSCOCT00035985001 | |
| 45093 chr10 manual_curation exon 12997886 12998051 . - . Parent=GSCOCT00035985001 | |
| 45094 chr10 manual_curation exon 12998216 12998380 . - . Parent=GSCOCT00035985001 | |
| 45095 chr10 manual_curation exon 12998477 12998802 . - . Parent=GSCOCT00035985001 | |
| 45096 chr10 manual_curation exon 12998947 12999503 . - . Parent=GSCOCT00035985001 | |
| 45097 chr10 manual_curation exon 12999597 13000115 . - . Parent=GSCOCT00035985001 | |
| 45098 chr10 manual_curation CDS 12995755 12996043 . - 2 Parent=GSCOCT00035985001 | |
| 45099 chr10 manual_curation CDS 12996875 12996968 . - 1 Parent=GSCOCT00035985001 | |
| 45100 chr10 manual_curation CDS 12997057 12997187 . - 2 Parent=GSCOCT00035985001 | |
| 45101 chr10 manual_curation CDS 12997275 12997468 . - 0 Parent=GSCOCT00035985001 | |
| 45102 chr10 manual_curation CDS 12997563 12997673 . - 0 Parent=GSCOCT00035985001 | |
| 45103 chr10 manual_curation CDS 12997886 12998051 . - 2 Parent=GSCOCT00035985001 | |
| 45104 chr10 manual_curation CDS 12998216 12998380 . - 2 Parent=GSCOCT00035985001 | |
| 45105 chr10 manual_curation CDS 12998477 12998802 . - 0 Parent=GSCOCT00035985001 | |
| 45106 chr10 manual_curation CDS 12998947 12999503 . - 1 Parent=GSCOCT00035985001 | |
| 45107 chr10 manual_curation CDS 12999597 12999807 . - 0 Parent=GSCOCT00035985001 | |
| 45108 chr10 manual_curation gene 13121004 13130547 . - . ID=GSCOCG00035989001;Name=Cc10_g10510 | |
| 45109 chr10 manual_curation mRNA 13121004 13130547 . - . ID=GSCOCT00035989001;Parent=GSCOCG00035989001;Name=Cc10_g10510 | |
| 45110 chr10 manual_curation polypeptide 13121275 13130436 . - . ID=GSCOCP00035989001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:O94235,SwissProt:P33981,SwissProt:Q54UL8,TAIR:AT1G77720.1,TAIR:AT4G08470.1,TAIR:AT4G08500.1,TrEMBL:B9GUE9,TrEMBL:B9RJ96,TrEMBL:F6H0L8;Derives_from=GSCOCT00035989001;Name=Cc10_g10510;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.12.2,PRODUCT:putative protein kinase 1,CC_functional_completeness:complete,CC_gene:mph1,CC_gene:mps1,CC_gene:TTK;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035989001~ putative protein kinase 1~ mph1~ complete;original_location=complement(join(749784..750003%2C748233..748646%2C747020..747972%2C743281..743481%2C741675..741836%2C740842..741432));owner=coffea | |
| 45111 chr10 manual_curation exon 13121004 13121865 . - . Parent=GSCOCT00035989001 | |
| 45112 chr10 manual_curation exon 13122108 13122269 . - . Parent=GSCOCT00035989001 | |
| 45113 chr10 manual_curation exon 13123714 13123914 . - . Parent=GSCOCT00035989001 | |
| 45114 chr10 manual_curation exon 13127453 13128405 . - . Parent=GSCOCT00035989001 | |
| 45115 chr10 manual_curation exon 13128666 13129079 . - . Parent=GSCOCT00035989001 | |
| 45116 chr10 manual_curation exon 13130217 13130547 . - . Parent=GSCOCT00035989001 | |
| 45117 chr10 manual_curation CDS 13121275 13121865 . - 0 Parent=GSCOCT00035989001 | |
| 45118 chr10 manual_curation CDS 13122108 13122269 . - 0 Parent=GSCOCT00035989001 | |
| 45119 chr10 manual_curation CDS 13123714 13123914 . - 0 Parent=GSCOCT00035989001 | |
| 45120 chr10 manual_curation CDS 13127453 13128405 . - 1 Parent=GSCOCT00035989001 | |
| 45121 chr10 manual_curation CDS 13128666 13129079 . - 1 Parent=GSCOCT00035989001 | |
| 45122 chr10 manual_curation CDS 13130217 13130436 . - 0 Parent=GSCOCT00035989001 | |
| 45123 chr10 manual_curation gene 13236988 13242686 . - . ID=GSCOCG00035992001;Name=Cc10_g10520 | |
| 45124 chr10 manual_curation mRNA 13236988 13242686 . - . ID=GSCOCT00035992001;Parent=GSCOCG00035992001;Name=Cc10_g10520 | |
| 45125 chr10 manual_curation polypeptide 13237433 13242686 . - . ID=GSCOCP00035992001;Dbxref=SwissProt:Q7XJS0,TAIR:AT2G17900.1,TrEMBL:B9RJ97,TrEMBL:E0CRB7,TrEMBL:I1JZ98;Derives_from=GSCOCT00035992001;Name=Cc10_g10520;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Histone-lysine N-methyltransferase ASHR1,CC_functional_completeness:fragment,CC_gene:ASHR1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035992001~ Histone-lysine N-methyltransferase ASHR1~ ASHR1~ fragment;original_location=complement(join(862185..862253%2C862004..862094%2C861796..861912%2C861424..861530%2C861075..861144%2C858944..859007%2C857000..857165));owner=coffea | |
| 45126 chr10 manual_curation exon 13236988 13237598 . - . Parent=GSCOCT00035992001 | |
| 45127 chr10 manual_curation exon 13239377 13239440 . - . Parent=GSCOCT00035992001 | |
| 45128 chr10 manual_curation exon 13241508 13241577 . - . Parent=GSCOCT00035992001 | |
| 45129 chr10 manual_curation exon 13241857 13241963 . - . Parent=GSCOCT00035992001 | |
| 45130 chr10 manual_curation exon 13242229 13242345 . - . Parent=GSCOCT00035992001 | |
| 45131 chr10 manual_curation exon 13242437 13242527 . - . Parent=GSCOCT00035992001 | |
| 45132 chr10 manual_curation exon 13242618 13242686 . - . Parent=GSCOCT00035992001 | |
| 45133 chr10 manual_curation CDS 13237433 13237598 . - 2 Parent=GSCOCT00035992001 | |
| 45134 chr10 manual_curation CDS 13239377 13239440 . - 1 Parent=GSCOCT00035992001 | |
| 45135 chr10 manual_curation CDS 13241508 13241577 . - 0 Parent=GSCOCT00035992001 | |
| 45136 chr10 manual_curation CDS 13241857 13241963 . - 1 Parent=GSCOCT00035992001 | |
| 45137 chr10 manual_curation CDS 13242229 13242345 . - 1 Parent=GSCOCT00035992001 | |
| 45138 chr10 manual_curation CDS 13242437 13242527 . - 0 Parent=GSCOCT00035992001 | |
| 45139 chr10 manual_curation CDS 13242618 13242686 . - 0 Parent=GSCOCT00035992001 | |
| 45140 chr10 manual_curation gene 13249955 13251391 . - . ID=GSCOCG00035994001;Name=Cc10_g10530 | |
| 45141 chr10 manual_curation mRNA 13249955 13251391 . - . ID=GSCOCT00035994001;Parent=GSCOCG00035994001;Name=Cc10_g10530 | |
| 45142 chr10 manual_curation polypeptide 13249955 13251391 . - . ID=GSCOCP00035994001;Dbxref=InterPro:IPR001214,PFAM:PF00856,PROFILE:PS50280,SwissProt:Q7XJS0,SwissProt:Q9CWR2,SwissProt:Q9H7B4,TAIR:AT2G17900.1,TrEMBL:B9H7A9,TrEMBL:B9RJ97,TrEMBL:E0CRB7;Derives_from=GSCOCT00035994001;Name=Cc10_g10530;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Histone-lysine N-methyltransferase ASHR1,CC_functional_completeness:fragment,CC_gene:ASHR1,CC_gene:SMYD3,CC_gene:Smyd3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035994001~ Histone-lysine N-methyltransferase ASHR1~ ASHR1~ fragment;original_location=complement(join(870878..870958%2C869701..869789%2C869522..869636));owner=coffea | |
| 45143 chr10 manual_curation exon 13249955 13250069 . - . Parent=GSCOCT00035994001 | |
| 45144 chr10 manual_curation exon 13250134 13250222 . - . Parent=GSCOCT00035994001 | |
| 45145 chr10 manual_curation exon 13251311 13251391 . - . Parent=GSCOCT00035994001 | |
| 45146 chr10 manual_curation CDS 13249955 13250069 . - 2 Parent=GSCOCT00035994001 | |
| 45147 chr10 manual_curation CDS 13250134 13250222 . - 0 Parent=GSCOCT00035994001 | |
| 45148 chr10 manual_curation CDS 13251311 13251391 . - 0 Parent=GSCOCT00035994001 | |
| 45149 chr10 manual_curation gene 13251449 13255199 . - . ID=GSCOCG00035995001;Name=Cc10_g10540 | |
| 45150 chr10 manual_curation mRNA 13251449 13255199 . - . ID=GSCOCT00035995001;Parent=GSCOCG00035995001;Name=Cc10_g10540 | |
| 45151 chr10 manual_curation polypeptide 13251449 13254985 . - . ID=GSCOCP00035995001;Dbxref=InterPro:IPR002893,PFAM:PF01753,PROFILE:PS50865,PROSITE:PS01360,SwissProt:Q5BJI7,SwissProt:Q6GN68,SwissProt:Q7XJS0,TAIR:AT2G17900.1,TrEMBL:D7LAC4,TrEMBL:E0CRB7,TrEMBL:G7J3L4;Derives_from=GSCOCT00035995001;Name=Cc10_g10540;Ontology_term=CC_evidence_code:ISS,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Histone-lysine N-methyltransferase ASHR1,CC_functional_completeness:fragment,CC_gene:ASHR1,CC_gene:smyd2a,CC_gene:smyd2-b;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035995001~ Histone-lysine N-methyltransferase ASHR1~ ASHR1~ fragment;original_location=complement(join(874450..874552%2C874097..874248%2C873248..873382%2C871121..871175%2C871016..871074));owner=coffea | |
| 45152 chr10 manual_curation exon 13251449 13251507 . - . Parent=GSCOCT00035995001 | |
| 45153 chr10 manual_curation exon 13251554 13251608 . - . Parent=GSCOCT00035995001 | |
| 45154 chr10 manual_curation exon 13253681 13253815 . - . Parent=GSCOCT00035995001 | |
| 45155 chr10 manual_curation exon 13254530 13254681 . - . Parent=GSCOCT00035995001 | |
| 45156 chr10 manual_curation exon 13254883 13255199 . - . Parent=GSCOCT00035995001 | |
| 45157 chr10 manual_curation CDS 13251449 13251507 . - 1 Parent=GSCOCT00035995001 | |
| 45158 chr10 manual_curation CDS 13251554 13251608 . - 0 Parent=GSCOCT00035995001 | |
| 45159 chr10 manual_curation CDS 13253681 13253815 . - 0 Parent=GSCOCT00035995001 | |
| 45160 chr10 manual_curation CDS 13254530 13254681 . - 1 Parent=GSCOCT00035995001 | |
| 45161 chr10 manual_curation CDS 13254883 13254985 . - 0 Parent=GSCOCT00035995001 | |
| 45162 chr10 manual_curation gene 13712839 13724741 . + . ID=GSCOCG00036003001;Name=Cc10_g10550 | |
| 45163 chr10 manual_curation mRNA 13712839 13724741 . + . ID=GSCOCT00036003001;Parent=GSCOCG00036003001;Name=Cc10_g10550 | |
| 45164 chr10 manual_curation polypeptide 13713483 13724598 . + . ID=GSCOCP00036003001;Dbxref=InterPro:IPR003142,InterPro:IPR004143,InterPro:IPR004408,PANTHER:PTHR12835,PFAM:PF02237,PFAM:PF03099,SwissProt:O14353,SwissProt:P50747,SwissProt:Q920N2,TAIR:AT1G37150.2,TAIR:AT2G25710.1,TIGRFAMs:TIGR00121,TrEMBL:B9GUF0,TrEMBL:F6H0L9,TrEMBL:G7J3L5;Derives_from=GSCOCT00036003001;Name=Cc10_g10550;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004077,GO:0006464,CC_EC_number:6.3.4.15,PRODUCT:Putative Biotin--protein ligase,CC_functional_completeness:fragment,CC_gene:HLCS,CC_gene:Hlcs,CC_gene:bpl1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00036003001~ Putative Biotin--protein ligase~ HLCS~ fragment;original_location=join(1333050..1333113%2C1335928..1336198%2C1336619..1336680%2C1336787..1336935%2C1338514..1338634%2C1338881..1339036%2C1339647..1339692%2C1340201..1340273%2C1341677..1341753%2C1344123..1344165);owner=coffea | |
| 45165 chr10 manual_curation exon 13712839 13713546 . + . Parent=GSCOCT00036003001 | |
| 45166 chr10 manual_curation exon 13716361 13716631 . + . Parent=GSCOCT00036003001 | |
| 45167 chr10 manual_curation exon 13717052 13717113 . + . Parent=GSCOCT00036003001 | |
| 45168 chr10 manual_curation exon 13717220 13717368 . + . Parent=GSCOCT00036003001 | |
| 45169 chr10 manual_curation exon 13718947 13719067 . + . Parent=GSCOCT00036003001 | |
| 45170 chr10 manual_curation exon 13719314 13719469 . + . Parent=GSCOCT00036003001 | |
| 45171 chr10 manual_curation exon 13720080 13720125 . + . Parent=GSCOCT00036003001 | |
| 45172 chr10 manual_curation exon 13720634 13720706 . + . Parent=GSCOCT00036003001 | |
| 45173 chr10 manual_curation exon 13722110 13722186 . + . Parent=GSCOCT00036003001 | |
| 45174 chr10 manual_curation exon 13724556 13724741 . + . Parent=GSCOCT00036003001 | |
| 45175 chr10 manual_curation CDS 13713483 13713546 . + 0 Parent=GSCOCT00036003001 | |
| 45176 chr10 manual_curation CDS 13716361 13716631 . + 1 Parent=GSCOCT00036003001 | |
| 45177 chr10 manual_curation CDS 13717052 13717113 . + 2 Parent=GSCOCT00036003001 | |
| 45178 chr10 manual_curation CDS 13717220 13717368 . + 1 Parent=GSCOCT00036003001 | |
| 45179 chr10 manual_curation CDS 13718947 13719067 . + 0 Parent=GSCOCT00036003001 | |
| 45180 chr10 manual_curation CDS 13719314 13719469 . + 1 Parent=GSCOCT00036003001 | |
| 45181 chr10 manual_curation CDS 13720080 13720125 . + 1 Parent=GSCOCT00036003001 | |
| 45182 chr10 manual_curation CDS 13720634 13720706 . + 2 Parent=GSCOCT00036003001 | |
| 45183 chr10 manual_curation CDS 13722110 13722186 . + 0 Parent=GSCOCT00036003001 | |
| 45184 chr10 manual_curation CDS 13724556 13724598 . + 2 Parent=GSCOCT00036003001 | |
| 45185 chr10 manual_curation gene 13769297 13786770 . + . ID=GSCOCG00036007001;Name=Cc10_g10560 | |
| 45186 chr10 manual_curation mRNA 13769297 13786770 . + . ID=GSCOCT00036007001;Parent=GSCOCG00036007001;Name=Cc10_g10560 | |
| 45187 chr10 manual_curation polypeptide 13769755 13786506 . + . ID=GSCOCP00036007001;Dbxref=GENE3D:G3DSA:2.30.29.30,InterPro:IPR000648,InterPro:IPR001849,InterPro:IPR011993,PANTHER:PTHR10972,PFAM:PF00169,PFAM:PF01237,PROFILE:PS50003,SMART:SM00233,SwissProt:O80866,SwissProt:Q8L751,SwissProt:Q9SAF0,TAIR:AT1G13170.2,TAIR:AT2G31020.1,TAIR:AT4G08180.1,TrEMBL:A9ZM29,TrEMBL:B9GUF2,TrEMBL:B9RJA1;Derives_from=GSCOCT00036007001;Name=Cc10_g10560;Ontology_term=CC_evidence_code:ISS,GO:0008202,CC_EC_number:missing_EC_number,PRODUCT:Oxysterol-binding protein-related protein 1C,CC_functional_completeness:complete,CC_gene:ORP1C,CC_gene:ORP1A,CC_gene:ORP1D;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00036007001~ Oxysterol-binding protein-related protein 1C~ ORP1C~ complete;original_location=join(1389322..1389529%2C1389644..1389927%2C1390539..1390895%2C1394722..1394815%2C1399076..1399524%2C1400454..1400609%2C1402818..1402985%2C1403067..1403207%2C1403866..1404096%2C1404542..1404655%2C1405906..1406073);owner=coffea | |
| 45188 chr10 manual_curation exon 13769297 13769962 . + . Parent=GSCOCT00036007001 | |
| 45189 chr10 manual_curation exon 13770077 13770360 . + . Parent=GSCOCT00036007001 | |
| 45190 chr10 manual_curation exon 13770972 13771328 . + . Parent=GSCOCT00036007001 | |
| 45191 chr10 manual_curation exon 13775155 13775248 . + . Parent=GSCOCT00036007001 | |
| 45192 chr10 manual_curation exon 13779509 13779957 . + . Parent=GSCOCT00036007001 | |
| 45193 chr10 manual_curation exon 13780887 13781042 . + . Parent=GSCOCT00036007001 | |
| 45194 chr10 manual_curation exon 13783251 13783418 . + . Parent=GSCOCT00036007001 | |
| 45195 chr10 manual_curation exon 13783500 13783640 . + . Parent=GSCOCT00036007001 | |
| 45196 chr10 manual_curation exon 13784299 13784529 . + . Parent=GSCOCT00036007001 | |
| 45197 chr10 manual_curation exon 13784975 13785088 . + . Parent=GSCOCT00036007001 | |
| 45198 chr10 manual_curation exon 13786339 13786770 . + . Parent=GSCOCT00036007001 | |
| 45199 chr10 manual_curation CDS 13769755 13769962 . + 0 Parent=GSCOCT00036007001 | |
| 45200 chr10 manual_curation CDS 13770077 13770360 . + 1 Parent=GSCOCT00036007001 | |
| 45201 chr10 manual_curation CDS 13770972 13771328 . + 0 Parent=GSCOCT00036007001 | |
| 45202 chr10 manual_curation CDS 13775155 13775248 . + 0 Parent=GSCOCT00036007001 | |
| 45203 chr10 manual_curation CDS 13779509 13779957 . + 1 Parent=GSCOCT00036007001 | |
| 45204 chr10 manual_curation CDS 13780887 13781042 . + 0 Parent=GSCOCT00036007001 | |
| 45205 chr10 manual_curation CDS 13783251 13783418 . + 0 Parent=GSCOCT00036007001 | |
| 45206 chr10 manual_curation CDS 13783500 13783640 . + 0 Parent=GSCOCT00036007001 | |
| 45207 chr10 manual_curation CDS 13784299 13784529 . + 0 Parent=GSCOCT00036007001 | |
| 45208 chr10 manual_curation CDS 13784975 13785088 . + 0 Parent=GSCOCT00036007001 | |
| 45209 chr10 manual_curation CDS 13786339 13786506 . + 0 Parent=GSCOCT00036007001 | |
| 45210 chr10 manual_curation gene 13790854 14010816 . + . ID=GSCOCG00036008001;Name=Cc10_g10570 | |
| 45211 chr10 manual_curation mRNA 13790854 14010816 . + . ID=GSCOCT00036008001;Parent=GSCOCG00036008001;Name=Cc10_g10570 | |
| 45212 chr10 manual_curation polypeptide 13790854 14010606 . + . ID=GSCOCP00036008001;Dbxref=InterPro:IPR005175,InterPro:IPR007087,PFAM:PF03479,PROFILE:PS50157,PROSITE:PS00028,SwissProt:Q9S7C9,TAIR:AT1G75710.1,TAIR:AT4G27240.1,TAIR:AT5G54630.1,TrEMBL:B9RJ95,TrEMBL:F6H0L7,TrEMBL:I1JZ96;Derives_from=GSCOCT00036008001;Name=Cc10_g10570;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative C2H2-like zinc finger protein,CC_functional_completeness:modules,CC_gene:ESC;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00036008001~ Putative C2H2-like zinc finger protein~ ESC~ modules;original_location=join(1410421..1410440%2C1410611..1411356%2C1411859..1412469%2C1629064..1629094%2C1629596..1630173);owner=coffea | |
| 45213 chr10 manual_curation exon 13790854 13790873 . + . Parent=GSCOCT00036008001 | |
| 45214 chr10 manual_curation exon 13791044 13791789 . + . Parent=GSCOCT00036008001 | |
| 45215 chr10 manual_curation exon 13792292 13792902 . + . Parent=GSCOCT00036008001 | |
| 45216 chr10 manual_curation exon 14009497 14009527 . + . Parent=GSCOCT00036008001 | |
| 45217 chr10 manual_curation exon 14010029 14010816 . + . Parent=GSCOCT00036008001 | |
| 45218 chr10 manual_curation CDS 13790854 13790873 . + 0 Parent=GSCOCT00036008001 | |
| 45219 chr10 manual_curation CDS 13791044 13791789 . + 2 Parent=GSCOCT00036008001 | |
| 45220 chr10 manual_curation CDS 13792292 13792902 . + 1 Parent=GSCOCT00036008001 | |
| 45221 chr10 manual_curation CDS 14009497 14009527 . + 0 Parent=GSCOCT00036008001 | |
| 45222 chr10 manual_curation CDS 14010029 14010606 . + 1 Parent=GSCOCT00036008001 | |
| 45223 chr10 manual_curation gene 14025642 14045227 . - . ID=GSCOCG00036010001;Name=Cc10_g10580 | |
| 45224 chr10 manual_curation mRNA 14025642 14045227 . - . ID=GSCOCT00036010001;Parent=GSCOCG00036010001;Name=Cc10_g10580 | |
| 45225 chr10 manual_curation polypeptide 14025642 14044950 . - . ID=GSCOCP00036010001;Dbxref=InterPro:IPR019378,PFAM:PF10250,SwissProt:Q8W486,TAIR:AT1G35510.1,TAIR:AT1G38065.1,TAIR:AT1G38131.1,TrEMBL:B9RJ47,TrEMBL:E0CRB1,TrEMBL:G7K8X8;Derives_from=GSCOCT00036010001;Name=Cc10_g10580;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:O-fucosyltransferase family protein,CC_functional_completeness:complete,CC_gene:At1g04910;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00036010001~ O-fucosyltransferase family protein~ At1g04910~ complete;original_location=complement(join(1664140..1664517%2C1660564..1660642%2C1660303..1660370%2C1656969..1657057%2C1656446..1656643%2C1655146..1655350%2C1654842..1655009%2C1653499..1653666%2C1652426..1652616%2C1645209..1645395));owner=coffea | |
| 45226 chr10 manual_curation exon 14025642 14025828 . - . Parent=GSCOCT00036010001 | |
| 45227 chr10 manual_curation exon 14032859 14033049 . - . Parent=GSCOCT00036010001 | |
| 45228 chr10 manual_curation exon 14033932 14034099 . - . Parent=GSCOCT00036010001 | |
| 45229 chr10 manual_curation exon 14035275 14035442 . - . Parent=GSCOCT00036010001 | |
| 45230 chr10 manual_curation exon 14035579 14035783 . - . Parent=GSCOCT00036010001 | |
| 45231 chr10 manual_curation exon 14036879 14037076 . - . Parent=GSCOCT00036010001 | |
| 45232 chr10 manual_curation exon 14037402 14037490 . - . Parent=GSCOCT00036010001 | |
| 45233 chr10 manual_curation exon 14040736 14040803 . - . Parent=GSCOCT00036010001 | |
| 45234 chr10 manual_curation exon 14040997 14041075 . - . Parent=GSCOCT00036010001 | |
| 45235 chr10 manual_curation exon 14044573 14045227 . - . Parent=GSCOCT00036010001 | |
| 45236 chr10 manual_curation CDS 14025642 14025828 . - 2 Parent=GSCOCT00036010001 | |
| 45237 chr10 manual_curation CDS 14032859 14033049 . - 0 Parent=GSCOCT00036010001 | |
| 45238 chr10 manual_curation CDS 14033932 14034099 . - 0 Parent=GSCOCT00036010001 | |
| 45239 chr10 manual_curation CDS 14035275 14035442 . - 0 Parent=GSCOCT00036010001 | |
| 45240 chr10 manual_curation CDS 14035579 14035783 . - 2 Parent=GSCOCT00036010001 | |
| 45241 chr10 manual_curation CDS 14036879 14037076 . - 2 Parent=GSCOCT00036010001 | |
| 45242 chr10 manual_curation CDS 14037402 14037490 . - 0 Parent=GSCOCT00036010001 | |
| 45243 chr10 manual_curation CDS 14040736 14040803 . - 1 Parent=GSCOCT00036010001 | |
| 45244 chr10 manual_curation CDS 14040997 14041075 . - 0 Parent=GSCOCT00036010001 | |
| 45245 chr10 manual_curation CDS 14044573 14044950 . - 0 Parent=GSCOCT00036010001 | |
| 45246 chr10 manual_curation gene 14075857 14104737 . - . ID=GSCOCG00036011001;Name=Cc10_g10590 | |
| 45247 chr10 manual_curation mRNA 14075857 14104737 . - . ID=GSCOCT00036011001;Parent=GSCOCG00036011001;Name=Cc10_g10590 | |
| 45248 chr10 manual_curation polypeptide 14076110 14104737 . - . ID=GSCOCP00036011001;Dbxref=InterPro:IPR008081,PFAM:PF05994,PRINTS:PR01698,SwissProt:Q299G2,SwissProt:Q5S2C3,SwissProt:Q6UK63,TAIR:AT5G18410.1,TrEMBL:B7ZGK3,TrEMBL:F6HI28,TrEMBL:I1NCF6;Derives_from=GSCOCT00036011001;Name=Cc10_g10590;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein PIR,CC_functional_completeness:complete,CC_gene:PIR,CC_gene:pirA,CC_gene:Sra-1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00036011001~ Protein PIR~ PIR~ complete;original_location=complement(join(1724228..1724304%2C1723182..1723274%2C1719612..1719681%2C1719216..1719280%2C1718291..1718486%2C1717951..1718134%2C1717703..1717722%2C1716901..1716987%2C1716420..1716635%2C1715224..1715435%2C1713859..1714006%2C1713278..1713446%2C1711119..1711195%2C1709994..1710164%2C1709381..1709457%2C1709195..1709297%2C1708052..1708171%2C1707818..1707961%2C1705031..1705180%2C1703617..1703760%2C1701852..1701939%2C1701188..1701318%2C1699815..1700022%2C1698451..1698623%2C1697835..1698035%2C1695677..1695871));owner=coffea | |
| 45249 chr10 manual_curation exon 14075857 14076304 . - . Parent=GSCOCT00036011001 | |
| 45250 chr10 manual_curation exon 14078268 14078468 . - . Parent=GSCOCT00036011001 | |
| 45251 chr10 manual_curation exon 14078884 14079056 . - . Parent=GSCOCT00036011001 | |
| 45252 chr10 manual_curation exon 14080248 14080455 . - . Parent=GSCOCT00036011001 | |
| 45253 chr10 manual_curation exon 14081621 14081751 . - . Parent=GSCOCT00036011001 | |
| 45254 chr10 manual_curation exon 14082285 14082372 . - . Parent=GSCOCT00036011001 | |
| 45255 chr10 manual_curation exon 14084050 14084193 . - . Parent=GSCOCT00036011001 | |
| 45256 chr10 manual_curation exon 14085464 14085613 . - . Parent=GSCOCT00036011001 | |
| 45257 chr10 manual_curation exon 14088251 14088394 . - . Parent=GSCOCT00036011001 | |
| 45258 chr10 manual_curation exon 14088485 14088604 . - . Parent=GSCOCT00036011001 | |
| 45259 chr10 manual_curation exon 14089628 14089730 . - . Parent=GSCOCT00036011001 | |
| 45260 chr10 manual_curation exon 14089814 14089890 . - . Parent=GSCOCT00036011001 | |
| 45261 chr10 manual_curation exon 14090427 14090597 . - . Parent=GSCOCT00036011001 | |
| 45262 chr10 manual_curation exon 14091552 14091628 . - . Parent=GSCOCT00036011001 | |
| 45263 chr10 manual_curation exon 14093711 14093879 . - . Parent=GSCOCT00036011001 | |
| 45264 chr10 manual_curation exon 14094292 14094439 . - . Parent=GSCOCT00036011001 | |
| 45265 chr10 manual_curation exon 14095657 14095868 . - . Parent=GSCOCT00036011001 | |
| 45266 chr10 manual_curation exon 14096853 14097068 . - . Parent=GSCOCT00036011001 | |
| 45267 chr10 manual_curation exon 14097334 14097420 . - . Parent=GSCOCT00036011001 | |
| 45268 chr10 manual_curation exon 14098136 14098155 . - . Parent=GSCOCT00036011001 | |
| 45269 chr10 manual_curation exon 14098384 14098567 . - . Parent=GSCOCT00036011001 | |
| 45270 chr10 manual_curation exon 14098724 14098919 . - . Parent=GSCOCT00036011001 | |
| 45271 chr10 manual_curation exon 14099649 14099713 . - . Parent=GSCOCT00036011001 | |
| 45272 chr10 manual_curation exon 14100045 14100114 . - . Parent=GSCOCT00036011001 | |
| 45273 chr10 manual_curation exon 14103615 14103707 . - . Parent=GSCOCT00036011001 | |
| 45274 chr10 manual_curation exon 14104661 14104737 . - . Parent=GSCOCT00036011001 | |
| 45275 chr10 manual_curation CDS 14076110 14076304 . - 0 Parent=GSCOCT00036011001 | |
| 45276 chr10 manual_curation CDS 14078268 14078468 . - 0 Parent=GSCOCT00036011001 | |
| 45277 chr10 manual_curation CDS 14078884 14079056 . - 1 Parent=GSCOCT00036011001 | |
| 45278 chr10 manual_curation CDS 14080248 14080455 . - 0 Parent=GSCOCT00036011001 | |
| 45279 chr10 manual_curation CDS 14081621 14081751 . - 1 Parent=GSCOCT00036011001 | |
| 45280 chr10 manual_curation CDS 14082285 14082372 . - 0 Parent=GSCOCT00036011001 | |
| 45281 chr10 manual_curation CDS 14084050 14084193 . - 0 Parent=GSCOCT00036011001 | |
| 45282 chr10 manual_curation CDS 14085464 14085613 . - 0 Parent=GSCOCT00036011001 | |
| 45283 chr10 manual_curation CDS 14088251 14088394 . - 0 Parent=GSCOCT00036011001 | |
| 45284 chr10 manual_curation CDS 14088485 14088604 . - 0 Parent=GSCOCT00036011001 | |
| 45285 chr10 manual_curation CDS 14089628 14089730 . - 2 Parent=GSCOCT00036011001 | |
| 45286 chr10 manual_curation CDS 14089814 14089890 . - 0 Parent=GSCOCT00036011001 | |
| 45287 chr10 manual_curation CDS 14090427 14090597 . - 0 Parent=GSCOCT00036011001 | |
| 45288 chr10 manual_curation CDS 14091552 14091628 . - 1 Parent=GSCOCT00036011001 | |
| 45289 chr10 manual_curation CDS 14093711 14093879 . - 0 Parent=GSCOCT00036011001 | |
| 45290 chr10 manual_curation CDS 14094292 14094439 . - 2 Parent=GSCOCT00036011001 | |
| 45291 chr10 manual_curation CDS 14095657 14095868 . - 0 Parent=GSCOCT00036011001 | |
| 45292 chr10 manual_curation CDS 14096853 14097068 . - 0 Parent=GSCOCT00036011001 | |
| 45293 chr10 manual_curation CDS 14097334 14097420 . - 0 Parent=GSCOCT00036011001 | |
| 45294 chr10 manual_curation CDS 14098136 14098155 . - 1 Parent=GSCOCT00036011001 | |
| 45295 chr10 manual_curation CDS 14098384 14098567 . - 0 Parent=GSCOCT00036011001 | |
| 45296 chr10 manual_curation CDS 14098724 14098919 . - 2 Parent=GSCOCT00036011001 | |
| 45297 chr10 manual_curation CDS 14099649 14099713 . - 0 Parent=GSCOCT00036011001 | |
| 45298 chr10 manual_curation CDS 14100045 14100114 . - 2 Parent=GSCOCT00036011001 | |
| 45299 chr10 manual_curation CDS 14103615 14103707 . - 2 Parent=GSCOCT00036011001 | |
| 45300 chr10 manual_curation CDS 14104661 14104737 . - 0 Parent=GSCOCT00036011001 | |
| 45301 chr10 manual_curation gene 14104810 14106160 . - . ID=GSCOCG00036012001;Name=Cc10_g10600 | |
| 45302 chr10 manual_curation mRNA 14104810 14106160 . - . ID=GSCOCT00036012001;Parent=GSCOCG00036012001;Name=Cc10_g10600 | |
| 45303 chr10 manual_curation polypeptide 14104810 14106025 . - . ID=GSCOCP00036012001;Dbxref=InterPro:IPR008081,PANTHER:PTHR12195,SwissProt:Q5S2C3,TAIR:AT5G18410.1,TrEMBL:F6HI28;Derives_from=GSCOCT00036012001;Name=Cc10_g10600;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein PIR,CC_functional_completeness:fragment,CC_gene:PIR;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00036012001~ Protein PIR~ PIR~ fragment;original_location=complement(join(1725539..1725592%2C1725353..1725425%2C1725100..1725164%2C1724907..1724984%2C1724377..1724502));owner=coffea | |
| 45304 chr10 manual_curation exon 14104810 14104935 . - . Parent=GSCOCT00036012001 | |
| 45305 chr10 manual_curation exon 14105340 14105417 . - . Parent=GSCOCT00036012001 | |
| 45306 chr10 manual_curation exon 14105533 14105597 . - . Parent=GSCOCT00036012001 | |
| 45307 chr10 manual_curation exon 14105786 14105858 . - . Parent=GSCOCT00036012001 | |
| 45308 chr10 manual_curation exon 14105972 14106160 . - . Parent=GSCOCT00036012001 | |
| 45309 chr10 manual_curation CDS 14104810 14104935 . - 0 Parent=GSCOCT00036012001 | |
| 45310 chr10 manual_curation CDS 14105340 14105417 . - 0 Parent=GSCOCT00036012001 | |
| 45311 chr10 manual_curation CDS 14105533 14105597 . - 1 Parent=GSCOCT00036012001 | |
| 45312 chr10 manual_curation CDS 14105786 14105858 . - 0 Parent=GSCOCT00036012001 | |
| 45313 chr10 manual_curation CDS 14105972 14106025 . - 0 Parent=GSCOCT00036012001 | |
| 45314 chr10 manual_curation gene 14182552 14184816 . + . ID=GSCOCG00036013001;Name=Cc10_g10610 | |
| 45315 chr10 manual_curation mRNA 14182552 14184816 . + . ID=GSCOCT00036013001;Parent=GSCOCG00036013001;Name=Cc10_g10610 | |
| 45316 chr10 manual_curation polypeptide 14182623 14184816 . + . ID=GSCOCP00036013001;Derives_from=GSCOCT00036013001;Name=Cc10_g10610;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00036013001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(1802190..1802255%2C1802768..1803042%2C1803170..1803280%2C1803981..1804057%2C1804349..1804383);owner=coffea | |
| 45317 chr10 manual_curation exon 14182552 14182688 . + . Parent=GSCOCT00036013001 | |
| 45318 chr10 manual_curation exon 14183201 14183475 . + . Parent=GSCOCT00036013001 | |
| 45319 chr10 manual_curation exon 14183603 14183713 . + . Parent=GSCOCT00036013001 | |
| 45320 chr10 manual_curation exon 14184414 14184490 . + . Parent=GSCOCT00036013001 | |
| 45321 chr10 manual_curation exon 14184782 14184816 . + . Parent=GSCOCT00036013001 | |
| 45322 chr10 manual_curation CDS 14182623 14182688 . + 0 Parent=GSCOCT00036013001 | |
| 45323 chr10 manual_curation CDS 14183201 14183475 . + 0 Parent=GSCOCT00036013001 | |
| 45324 chr10 manual_curation CDS 14183603 14183713 . + 2 Parent=GSCOCT00036013001 | |
| 45325 chr10 manual_curation CDS 14184414 14184490 . + 2 Parent=GSCOCT00036013001 | |
| 45326 chr10 manual_curation CDS 14184782 14184816 . + 1 Parent=GSCOCT00036013001 | |
| 45327 chr10 manual_curation gene 14184898 14187549 . + . ID=GSCOCG00036014001;Name=Cc10_g10620 | |
| 45328 chr10 manual_curation mRNA 14184898 14187549 . + . ID=GSCOCT00036014001;Parent=GSCOCG00036014001;Name=Cc10_g10620 | |
| 45329 chr10 manual_curation polypeptide 14184898 14187223 . + . ID=GSCOCP00036014001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR006529,InterPro:IPR012677,PFAM:PF00076,PROFILE:PS50102,SMART:SM00360,SwissProt:Q8L716,SwissProt:Q9ZR39,SwissProt:Q9ZR40,TAIR:AT1G60830.1,TAIR:AT1G60900.1,TAIR:AT4G36690.1,TIGRFAMs:TIGR01642,TrEMBL:A9XLD1,TrEMBL:A9XLG6,TrEMBL:C0IXK1;Derives_from=GSCOCT00036014001;Name=Cc10_g10620;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,GO:0003723,GO:0005634,GO:0006397,CC_EC_number:missing_EC_number,PRODUCT:Splicing factor U2af large subunit B,CC_functional_completeness:fragment,CC_gene:U2AF65B,CC_gene:U2AF65A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00036014001~ Splicing factor U2af large subunit B~ U2AF65B~ fragment;original_location=join(1804465..1804471%2C1804665..1804738%2C1804821..1804865%2C1804984..1805043%2C1805169..1805229%2C1805313..1805425%2C1805609..1806055%2C1806151..1806286%2C1806470..1806537%2C1806653..1806790);owner=coffea | |
| 45330 chr10 manual_curation exon 14184898 14184904 . + . Parent=GSCOCT00036014001 | |
| 45331 chr10 manual_curation exon 14185098 14185171 . + . Parent=GSCOCT00036014001 | |
| 45332 chr10 manual_curation exon 14185254 14185298 . + . Parent=GSCOCT00036014001 | |
| 45333 chr10 manual_curation exon 14185417 14185476 . + . Parent=GSCOCT00036014001 | |
| 45334 chr10 manual_curation exon 14185602 14185662 . + . Parent=GSCOCT00036014001 | |
| 45335 chr10 manual_curation exon 14185746 14185858 . + . Parent=GSCOCT00036014001 | |
| 45336 chr10 manual_curation exon 14186042 14186488 . + . Parent=GSCOCT00036014001 | |
| 45337 chr10 manual_curation exon 14186584 14186719 . + . Parent=GSCOCT00036014001 | |
| 45338 chr10 manual_curation exon 14186903 14186970 . + . Parent=GSCOCT00036014001 | |
| 45339 chr10 manual_curation exon 14187086 14187549 . + . Parent=GSCOCT00036014001 | |
| 45340 chr10 manual_curation CDS 14184898 14184904 . + 0 Parent=GSCOCT00036014001 | |
| 45341 chr10 manual_curation CDS 14185098 14185171 . + 1 Parent=GSCOCT00036014001 | |
| 45342 chr10 manual_curation CDS 14185254 14185298 . + 0 Parent=GSCOCT00036014001 | |
| 45343 chr10 manual_curation CDS 14185417 14185476 . + 0 Parent=GSCOCT00036014001 | |
| 45344 chr10 manual_curation CDS 14185602 14185662 . + 0 Parent=GSCOCT00036014001 | |
| 45345 chr10 manual_curation CDS 14185746 14185858 . + 1 Parent=GSCOCT00036014001 | |
| 45346 chr10 manual_curation CDS 14186042 14186488 . + 0 Parent=GSCOCT00036014001 | |
| 45347 chr10 manual_curation CDS 14186584 14186719 . + 0 Parent=GSCOCT00036014001 | |
| 45348 chr10 manual_curation CDS 14186903 14186970 . + 1 Parent=GSCOCT00036014001 | |
| 45349 chr10 manual_curation CDS 14187086 14187223 . + 0 Parent=GSCOCT00036014001 | |
| 45350 chr10 manual_curation gene 14190329 14193361 . - . ID=GSCOCG00036015001;Name=Cc10_g10630 | |
| 45351 chr10 manual_curation mRNA 14190329 14193361 . - . ID=GSCOCT00036015001;Parent=GSCOCG00036015001;Name=Cc10_g10630 | |
| 45352 chr10 manual_curation polypeptide 14190528 14193293 . - . ID=GSCOCP00036015001;Dbxref=GENE3D:G3DSA:2.60.110.10,InterPro:IPR001938,PFAM:PF00314,PIR:PIRSF002703,PRINTS:PR00347,PROFILE:PS51367,SMART:SM00205,SUPERFAMILY:SSF49870,SwissProt:P28493,SwissProt:P50699,SwissProt:Q9FSG7,TAIR:AT1G75030.1,TAIR:AT1G75050.1,TAIR:AT1G77700.1,TrEMBL:B9H7B6,TrEMBL:F6H0U2,TrEMBL:G7K8X4;Derives_from=GSCOCT00036015001;Name=Cc10_g10630;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pathogenesis-related protein 5,CC_functional_completeness:modules,CC_gene:At1g75040,CC_gene:At1g18250,CC_gene:TL1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00036015001~ Pathogenesis-related protein 5~ At1g75040~ modules;original_location=complement(join(1812800..1812860%2C1811694..1812357%2C1810095..1810233));owner=coffea | |
| 45353 chr10 manual_curation exon 14190329 14190666 . - . Parent=GSCOCT00036015001 | |
| 45354 chr10 manual_curation exon 14192127 14192790 . - . Parent=GSCOCT00036015001 | |
| 45355 chr10 manual_curation exon 14193233 14193361 . - . Parent=GSCOCT00036015001 | |
| 45356 chr10 manual_curation CDS 14190528 14190666 . - 2 Parent=GSCOCT00036015001 | |
| 45357 chr10 manual_curation CDS 14192127 14192790 . - 1 Parent=GSCOCT00036015001 | |
| 45358 chr10 manual_curation CDS 14193233 14193293 . - 0 Parent=GSCOCT00036015001 | |
| 45359 chr10 manual_curation gene 14197915 14200554 . - . ID=GSCOCG00036016001;Name=Cc10_g10640 | |
| 45360 chr10 manual_curation mRNA 14197915 14200554 . - . ID=GSCOCT00036016001;Parent=GSCOCG00036016001;Name=Cc10_g10640 | |
| 45361 chr10 manual_curation polypeptide 14197915 14200554 . - . ID=GSCOCP00036016001;Dbxref=InterPro:IPR000719,InterPro:IPR001480,InterPro:IPR002290,InterPro:IPR003609,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR013227,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF01453,PFAM:PF08276,PROFILE:PS50011,PROFILE:PS50927,PROFILE:PS50948,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00108,SMART:SM00219,SMART:SM00220,SMART:SM00473,SUPERFAMILY:SSF51110,SUPERFAMILY:SSF56112,SwissProt:O65238,SwissProt:Q8RWZ5,SwissProt:Q9FLV4,TAIR:AT1G34300.1,TAIR:AT4G32300.1,TAIR:AT5G35370.1,TrEMBL:B6EB06,TrEMBL:F6H543,TrEMBL:G4XXY5;Derives_from=GSCOCT00036016001;Name=Cc10_g10640;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0005529,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5,CC_functional_completeness:complete,CC_gene:SD25,CC_gene:At5g35370,CC_gene:At5g24080;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00036016001~ Putative G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5~ SD25~ complete;original_location=complement(1817482..1820121);owner=coffea | |
| 45362 chr10 manual_curation exon 14197915 14200554 . - . Parent=GSCOCT00036016001 | |
| 45363 chr10 manual_curation CDS 14197915 14200554 . - 0 Parent=GSCOCT00036016001 | |
| 45364 chr10 manual_curation gene 14201895 14202933 . + . ID=GSCOCG00036018001;Name=Cc10_g10650 | |
| 45365 chr10 manual_curation mRNA 14201895 14202933 . + . ID=GSCOCT00036018001;Parent=GSCOCG00036018001;Name=Cc10_g10650 | |
| 45366 chr10 manual_curation polypeptide 14201895 14202933 . + . ID=GSCOCP00036018001;Dbxref=InterPro:IPR003608,InterPro:IPR016093,PFAM:PF02815,PROFILE:PS50919,SMART:SM00472,SUPERFAMILY:SSF82109,SwissProt:Q93ZE8,SwissProt:Q99470,SwissProt:Q9DCT5,TAIR:AT2G25110.1,TrEMBL:B9RNW9,TrEMBL:D7U863,TrEMBL:G7J9V5;Derives_from=GSCOCT00036018001;Name=Cc10_g10650;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:2.4.1.109,PRODUCT:Stromal cell-derived factor 2-like protein,CC_functional_completeness:fragment,CC_gene:At2g25110,CC_gene:SDF2,CC_gene:Sdf2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00036018001~ Stromal cell-derived factor 2-like protein~ At2g25110~ fragment;original_location=join(1821462..1821552%2C1821804..1821829%2C1822095..1822235%2C1822318..1822500);owner=coffea | |
| 45367 chr10 manual_curation exon 14201895 14201985 . + . Parent=GSCOCT00036018001 | |
| 45368 chr10 manual_curation exon 14202237 14202262 . + . Parent=GSCOCT00036018001 | |
| 45369 chr10 manual_curation exon 14202528 14202668 . + . Parent=GSCOCT00036018001 | |
| 45370 chr10 manual_curation exon 14202751 14202933 . + . Parent=GSCOCT00036018001 | |
| 45371 chr10 manual_curation CDS 14201895 14201985 . + 0 Parent=GSCOCT00036018001 | |
| 45372 chr10 manual_curation CDS 14202237 14202262 . + 1 Parent=GSCOCT00036018001 | |
| 45373 chr10 manual_curation CDS 14202528 14202668 . + 0 Parent=GSCOCT00036018001 | |
| 45374 chr10 manual_curation CDS 14202751 14202933 . + 0 Parent=GSCOCT00036018001 | |
| 45375 chr10 manual_curation gene 14338116 14342291 . - . ID=GSCOCG00019384001;Name=Cc10_g10660 | |
| 45376 chr10 manual_curation mRNA 14338116 14342291 . - . ID=GSCOCT00019384001;Parent=GSCOCG00019384001;Name=Cc10_g10660 | |
| 45377 chr10 manual_curation polypeptide 14338783 14342291 . - . ID=GSCOCP00019384001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q6L3N7,SwissProt:Q6L3Z7,SwissProt:Q8W1E0,TAIR:AT1G53350.1,TAIR:AT5G35450.1,TAIR:AT5G43470.1,TrEMBL:A0FD16,TrEMBL:A0FD19,TrEMBL:A1X877;Derives_from=GSCOCT00019384001;Name=Cc10_g10660;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1B-14,CC_functional_completeness:fragment,CC_gene:R1B-14,CC_gene:R1C-3,CC_gene:R1A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019384001~ Putative late blight resistance protein homolog R1B-14~ R1B-14~ fragment;original_location=complement(join(24794..25252%2C24017..24089%2C21744..23914));owner=coffea | |
| 45378 chr10 manual_curation exon 14338116 14340953 . - . Parent=GSCOCT00019384001 | |
| 45379 chr10 manual_curation exon 14341056 14341128 . - . Parent=GSCOCT00019384001 | |
| 45380 chr10 manual_curation exon 14341833 14342291 . - . Parent=GSCOCT00019384001 | |
| 45381 chr10 manual_curation CDS 14338783 14340953 . - 1 Parent=GSCOCT00019384001 | |
| 45382 chr10 manual_curation CDS 14341056 14341128 . - 0 Parent=GSCOCT00019384001 | |
| 45383 chr10 manual_curation CDS 14341833 14342291 . - 0 Parent=GSCOCT00019384001 | |
| 45384 chr10 manual_curation gene 14343824 14344971 . - . ID=GSCOCG00019385001;Name=Cc10_g10670 | |
| 45385 chr10 manual_curation mRNA 14343824 14344971 . - . ID=GSCOCT00019385001;Parent=GSCOCG00019385001;Name=Cc10_g10670 | |
| 45386 chr10 manual_curation polypeptide 14343824 14344971 . - . ID=GSCOCP00019385001;Dbxref=InterPro:IPR005828,PFAM:PF00083,SwissProt:O23492,SwissProt:Q9C757,SwissProt:Q9ZQP6,TAIR:AT1G30220.1,TAIR:AT2G35740.1,TAIR:AT4G16480.1,TrEMBL:B9HCU9,TrEMBL:B9S0X0,TrEMBL:Q9LKH1;Derives_from=GSCOCT00019385001;Name=Cc10_g10670;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006810,GO:0016021,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Inositol transporter 4,CC_functional_completeness:fragment,CC_gene:INT4,CC_gene:INT2,CC_gene:INT3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019385001~ Inositol transporter 4~ INT4~ fragment;original_location=complement(join(27764..27932%2C27622..27692%2C26785..27051));owner=coffea | |
| 45387 chr10 manual_curation exon 14343824 14344090 . - . Parent=GSCOCT00019385001 | |
| 45388 chr10 manual_curation exon 14344661 14344731 . - . Parent=GSCOCT00019385001 | |
| 45389 chr10 manual_curation exon 14344803 14344971 . - . Parent=GSCOCT00019385001 | |
| 45390 chr10 manual_curation CDS 14343824 14344090 . - 0 Parent=GSCOCT00019385001 | |
| 45391 chr10 manual_curation CDS 14344661 14344731 . - 1 Parent=GSCOCT00019385001 | |
| 45392 chr10 manual_curation CDS 14344803 14344971 . - 0 Parent=GSCOCT00019385001 | |
| 45393 chr10 manual_curation gene 14408109 14418234 . + . ID=GSCOCG00019389001;Name=Cc10_g10680 | |
| 45394 chr10 manual_curation mRNA 14408109 14418234 . + . ID=GSCOCT00019389001;Parent=GSCOCG00019389001;Name=Cc10_g10680 | |
| 45395 chr10 manual_curation polypeptide 14408186 14417839 . + . ID=GSCOCP00019389001;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR013525,PFAM:PF00005,PFAM:PF01061,PROFILE:PS50893,SMART:SM00382,SwissProt:Q7XA72,SwissProt:Q84TH5,SwissProt:Q9C6W5,TAIR:AT1G31770.1,TAIR:AT1G71960.1,TAIR:AT3G25620.2,TrEMBL:B9IQI5,TrEMBL:F6GY25,TrEMBL:I1NH97;Derives_from=GSCOCT00019389001;Name=Cc10_g10680;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0016020,GO:0016887,GO:0017111,CC_EC_number:3.6.3.29,CC_EC_number:3.6.3.29,PRODUCT:ABC transporter G family member 25,CC_functional_completeness:complete,CC_gene:ABCG25,CC_gene:ABCG14,CC_gene:ABCG21;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019389001~ ABC transporter G family member 25~ ABCG25~ complete;original_location=join(91147..91254%2C91534..92386%2C99782..100800);owner=coffea | |
| 45396 chr10 manual_curation exon 14408109 14408293 . + . Parent=GSCOCT00019389001 | |
| 45397 chr10 manual_curation exon 14408573 14409425 . + . Parent=GSCOCT00019389001 | |
| 45398 chr10 manual_curation exon 14416821 14418234 . + . Parent=GSCOCT00019389001 | |
| 45399 chr10 manual_curation CDS 14408186 14408293 . + 0 Parent=GSCOCT00019389001 | |
| 45400 chr10 manual_curation CDS 14408573 14409425 . + 0 Parent=GSCOCT00019389001 | |
| 45401 chr10 manual_curation CDS 14416821 14417839 . + 1 Parent=GSCOCT00019389001 | |
| 45402 chr10 manual_curation gene 14566122 14567165 . + . ID=GSCOCG00019391001;Name=Cc10_g10690 | |
| 45403 chr10 manual_curation mRNA 14566122 14567165 . + . ID=GSCOCT00019391001;Parent=GSCOCG00019391001;Name=Cc10_g10690 | |
| 45404 chr10 manual_curation polypeptide 14566150 14567098 . + . ID=GSCOCP00019391001;Dbxref=TAIR:AT1G35660.1,TrEMBL:B9IQI6,TrEMBL:B9SLE4,TrEMBL:F6GY04;Derives_from=GSCOCT00019391001;Name=Cc10_g10690;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B FUNCTIONS IN,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019391001~ Putative unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 19 plant structures%3B EXPRESSED DURING: 11 growth stages%3B Has 309 Blast hits to 256 proteins in 99 species: Archae - 0%3B Bacteria - 11%3B Metazoa - 192%3B Fungi - 12%3B Plants - 36%3B Viruses - 0%3B Other Eukaryotes - 58 (source: NCBI BLink).~ unknown_gene~ fragment;original_location=join(249111..249277%2C249915..250059);owner=coffea | |
| 45405 chr10 manual_curation exon 14566122 14566316 . + . Parent=GSCOCT00019391001 | |
| 45406 chr10 manual_curation exon 14566954 14567165 . + . Parent=GSCOCT00019391001 | |
| 45407 chr10 manual_curation CDS 14566150 14566316 . + 0 Parent=GSCOCT00019391001 | |
| 45408 chr10 manual_curation CDS 14566954 14567098 . + 2 Parent=GSCOCT00019391001 | |
| 45409 chr10 manual_curation gene 14570582 14576731 . + . ID=GSCOCG00019392001;Name=Cc10_g10700 | |
| 45410 chr10 manual_curation mRNA 14570582 14576731 . + . ID=GSCOCT00019392001;Parent=GSCOCG00019392001;Name=Cc10_g10700 | |
| 45411 chr10 manual_curation polypeptide 14570582 14576360 . + . ID=GSCOCP00019392001;Dbxref=SwissProt:Q3B7T1,SwissProt:Q5R9R1,SwissProt:Q6GQV7,TAIR:AT1G35660.1,TrEMBL:B9SLE4,TrEMBL:F6GY04,TrEMBL:G7I7V1;Derives_from=GSCOCT00019392001;Name=Cc10_g10700;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:EDRF1,CC_gene:Edrf1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019392001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 19 plant structures%3B EXPRESSED DURING: 11 growth stages%3B Has 309 Blast hits to 256 proteins in 99 species: Archae - 0%3B Bacteria - 11%3B Metazoa - 192%3B Fungi - 12%3B Plants - 36%3B Viruses - 0%3B Other Eukaryotes - 58 (source: NCBI BLink).~ EDRF1~ complete;original_location=join(253543..254021%2C254107..254680%2C254757..255008%2C255095..255286%2C255358..255432%2C255547..257964%2C259025..259321);owner=coffea | |
| 45412 chr10 manual_curation exon 14570582 14571060 . + . Parent=GSCOCT00019392001 | |
| 45413 chr10 manual_curation exon 14571146 14571719 . + . Parent=GSCOCT00019392001 | |
| 45414 chr10 manual_curation exon 14571796 14572047 . + . Parent=GSCOCT00019392001 | |
| 45415 chr10 manual_curation exon 14572134 14572325 . + . Parent=GSCOCT00019392001 | |
| 45416 chr10 manual_curation exon 14572397 14572471 . + . Parent=GSCOCT00019392001 | |
| 45417 chr10 manual_curation exon 14572586 14575003 . + . Parent=GSCOCT00019392001 | |
| 45418 chr10 manual_curation exon 14576064 14576731 . + . Parent=GSCOCT00019392001 | |
| 45419 chr10 manual_curation CDS 14570582 14571060 . + 0 Parent=GSCOCT00019392001 | |
| 45420 chr10 manual_curation CDS 14571146 14571719 . + 2 Parent=GSCOCT00019392001 | |
| 45421 chr10 manual_curation CDS 14571796 14572047 . + 0 Parent=GSCOCT00019392001 | |
| 45422 chr10 manual_curation CDS 14572134 14572325 . + 0 Parent=GSCOCT00019392001 | |
| 45423 chr10 manual_curation CDS 14572397 14572471 . + 0 Parent=GSCOCT00019392001 | |
| 45424 chr10 manual_curation CDS 14572586 14575003 . + 0 Parent=GSCOCT00019392001 | |
| 45425 chr10 manual_curation CDS 14576064 14576360 . + 0 Parent=GSCOCT00019392001 | |
| 45426 chr10 manual_curation gene 14588316 14590648 . + . ID=GSCOCG00019393001;Name=Cc10_g10710 | |
| 45427 chr10 manual_curation mRNA 14588316 14590648 . + . ID=GSCOCT00019393001;Parent=GSCOCG00019393001;Name=Cc10_g10710 | |
| 45428 chr10 manual_curation polypeptide 14588316 14590648 . + . ID=GSCOCP00019393001;Dbxref=GENE3D:G3DSA:3.40.50.200,InterPro:IPR000209,InterPro:IPR009020,InterPro:IPR010259,InterPro:IPR015500,InterPro:IPR022398,PANTHER:PTHR10795,PFAM:PF00082,PFAM:PF05922,PROSITE:PS00138,SUPERFAMILY:SSF52743,SUPERFAMILY:SSF54897,SwissProt:O64495,SwissProt:O65351,SwissProt:Q9LLL8,TAIR:AT2G05920.1,TAIR:AT3G14240.1,TAIR:AT4G34980.1,TrEMBL:A5B093,TrEMBL:Q2HV71,TrEMBL:Q38708;Derives_from=GSCOCT00019393001;Name=Cc10_g10710;Ontology_term=CC_evidence_code:ISS,GO:0004252,GO:0006508,GO:0042802,GO:0043086,CC_EC_number:3.4.21.25,PRODUCT:Protease-associated PA%3B Proteinase inhibitor I9%2C subtilisin propeptide,CC_functional_completeness:fragment,CC_gene:ARA12,CC_gene:XSP1,CC_gene:SDD1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019393001~ Protease-associated PA%3B Proteinase inhibitor I9%2C subtilisin propeptide~ ARA12~ fragment;original_location=join(271277..271597%2C272160..272328%2C272834..273252%2C273334..273609);owner=coffea | |
| 45429 chr10 manual_curation exon 14588316 14588636 . + . Parent=GSCOCT00019393001 | |
| 45430 chr10 manual_curation exon 14589199 14589367 . + . Parent=GSCOCT00019393001 | |
| 45431 chr10 manual_curation exon 14589873 14590291 . + . Parent=GSCOCT00019393001 | |
| 45432 chr10 manual_curation exon 14590373 14590648 . + . Parent=GSCOCT00019393001 | |
| 45433 chr10 manual_curation CDS 14588316 14588636 . + 0 Parent=GSCOCT00019393001 | |
| 45434 chr10 manual_curation CDS 14589199 14589367 . + 0 Parent=GSCOCT00019393001 | |
| 45435 chr10 manual_curation CDS 14589873 14590291 . + 1 Parent=GSCOCT00019393001 | |
| 45436 chr10 manual_curation CDS 14590373 14590648 . + 0 Parent=GSCOCT00019393001 | |
| 45437 chr10 manual_curation gene 14728981 14736060 . + . ID=GSCOCG00019397001;Name=Cc10_g10720 | |
| 45438 chr10 manual_curation mRNA 14728981 14736060 . + . ID=GSCOCT00019397001;Parent=GSCOCG00019397001;Name=Cc10_g10720 | |
| 45439 chr10 manual_curation polypeptide 14732686 14735630 . + . ID=GSCOCP00019397001;Dbxref=InterPro:IPR006912,PFAM:PF04827,SwissProt:B0BN95,SwissProt:Q6AZB8,SwissProt:Q96MB7,TAIR:AT3G55350.1,TAIR:AT3G63270.1,TAIR:AT5G12010.1,TrEMBL:B9T165,TrEMBL:D7SKK9,TrEMBL:G7IHM0;Derives_from=GSCOCT00019397001;Name=Cc10_g10720;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:PIF / Ping-Pong family of plant transposases,CC_functional_completeness:complete,CC_gene:Harbi1,CC_gene:HARBI1,CC_gene:harbi1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019397001~ PIF / Ping-Pong family of plant transposases~ Harbi1~ complete;original_location=join(415647..415773%2C417546..418591);owner=coffea | |
| 45440 chr10 manual_curation exon 14728981 14729066 . + . Parent=GSCOCT00019397001 | |
| 45441 chr10 manual_curation exon 14730149 14730210 . + . Parent=GSCOCT00019397001 | |
| 45442 chr10 manual_curation exon 14730488 14730593 . + . Parent=GSCOCT00019397001 | |
| 45443 chr10 manual_curation exon 14730697 14730857 . + . Parent=GSCOCT00019397001 | |
| 45444 chr10 manual_curation exon 14731688 14731744 . + . Parent=GSCOCT00019397001 | |
| 45445 chr10 manual_curation exon 14732396 14732524 . + . Parent=GSCOCT00019397001 | |
| 45446 chr10 manual_curation exon 14732626 14732812 . + . Parent=GSCOCT00019397001 | |
| 45447 chr10 manual_curation exon 14734585 14736060 . + . Parent=GSCOCT00019397001 | |
| 45448 chr10 manual_curation CDS 14732686 14732812 . + 0 Parent=GSCOCT00019397001 | |
| 45449 chr10 manual_curation CDS 14734585 14735630 . + 1 Parent=GSCOCT00019397001 | |
| 45450 chr10 manual_curation gene 14741205 14746119 . + . ID=GSCOCG00019399001;Name=Cc10_g10730 | |
| 45451 chr10 manual_curation mRNA 14741205 14746119 . + . ID=GSCOCT00019399001;Parent=GSCOCG00019399001;Name=Cc10_g10730 | |
| 45452 chr10 manual_curation polypeptide 14742797 14745759 . + . ID=GSCOCP00019399001;Dbxref=InterPro:IPR006912,PFAM:PF04827,SwissProt:B0BN95,SwissProt:Q8BR93,SwissProt:Q96MB7,TAIR:AT3G55350.1,TAIR:AT3G63270.1,TAIR:AT5G12010.1,TrEMBL:B9T165,TrEMBL:D7SKK9,TrEMBL:G7IHM0;Derives_from=GSCOCT00019399001;Name=Cc10_g10730;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:PIF / Ping-Pong family of plant transposases,CC_functional_completeness:complete,CC_gene:Harbi1,CC_gene:HARBI1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019399001~ PIF / Ping-Pong family of plant transposases~ Harbi1~ complete;original_location=join(425758..425884%2C427678..428720);owner=coffea | |
| 45453 chr10 manual_curation exon 14741205 14741800 . + . Parent=GSCOCT00019399001 | |
| 45454 chr10 manual_curation exon 14742482 14742642 . + . Parent=GSCOCT00019399001 | |
| 45455 chr10 manual_curation exon 14742737 14742923 . + . Parent=GSCOCT00019399001 | |
| 45456 chr10 manual_curation exon 14744717 14746119 . + . Parent=GSCOCT00019399001 | |
| 45457 chr10 manual_curation CDS 14742797 14742923 . + 0 Parent=GSCOCT00019399001 | |
| 45458 chr10 manual_curation CDS 14744717 14745759 . + 1 Parent=GSCOCT00019399001 | |
| 45459 chr10 manual_curation gene 14749691 14750698 . + . ID=GSCOCG00019401001;Name=Cc10_g10740 | |
| 45460 chr10 manual_curation mRNA 14749691 14750698 . + . ID=GSCOCT00019401001;Parent=GSCOCG00019401001;Name=Cc10_g10740 | |
| 45461 chr10 manual_curation polypeptide 14750492 14750698 . + . ID=GSCOCP00019401001;Derives_from=GSCOCT00019401001;Name=Cc10_g10740;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019401001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=433453..433659;owner=coffea | |
| 45462 chr10 manual_curation exon 14749691 14750153 . + . Parent=GSCOCT00019401001 | |
| 45463 chr10 manual_curation exon 14750254 14750698 . + . Parent=GSCOCT00019401001 | |
| 45464 chr10 manual_curation CDS 14750492 14750698 . + 0 Parent=GSCOCT00019401001 | |
| 45465 chr10 manual_curation gene 14754547 14758104 . + . ID=GSCOCG00019402001;Name=Cc10_g10750 | |
| 45466 chr10 manual_curation mRNA 14754547 14758104 . + . ID=GSCOCT00019402001;Parent=GSCOCG00019402001;Name=Cc10_g10750 | |
| 45467 chr10 manual_curation polypeptide 14754547 14758104 . + . ID=GSCOCP00019402001;Dbxref=InterPro:IPR001611,PFAM:PF00560,SwissProt:Q42371,SwissProt:Q9LHP4,SwissProt:Q9SHI2,TAIR:AT2G15080.1,TAIR:AT2G26330.1,TAIR:AT3G11010.1,TrEMBL:A5BVM4,TrEMBL:G7ITB2,TrEMBL:Q8L7L6;Derives_from=GSCOCT00019402001;Name=Cc10_g10750;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative LRR receptor-like serine/threonine-protein kinase ERECTA,CC_functional_completeness:complete,CC_gene:ERECTA,CC_gene:RCH2,CC_gene:At1g17230;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019402001~ Putative LRR receptor-like serine/threonine-protein kinase ERECTA~ ERECTA~ complete;original_location=join(437508..437631%2C437781..437899%2C439836..439872%2C440174..440457%2C440547..440657%2C440868..441065);owner=coffea | |
| 45468 chr10 manual_curation exon 14754547 14754670 . + . Parent=GSCOCT00019402001 | |
| 45469 chr10 manual_curation exon 14754820 14754938 . + . Parent=GSCOCT00019402001 | |
| 45470 chr10 manual_curation exon 14756875 14756911 . + . Parent=GSCOCT00019402001 | |
| 45471 chr10 manual_curation exon 14757213 14757496 . + . Parent=GSCOCT00019402001 | |
| 45472 chr10 manual_curation exon 14757586 14757696 . + . Parent=GSCOCT00019402001 | |
| 45473 chr10 manual_curation exon 14757907 14758104 . + . Parent=GSCOCT00019402001 | |
| 45474 chr10 manual_curation CDS 14754547 14754670 . + 0 Parent=GSCOCT00019402001 | |
| 45475 chr10 manual_curation CDS 14754820 14754938 . + 1 Parent=GSCOCT00019402001 | |
| 45476 chr10 manual_curation CDS 14756875 14756911 . + 0 Parent=GSCOCT00019402001 | |
| 45477 chr10 manual_curation CDS 14757213 14757496 . + 1 Parent=GSCOCT00019402001 | |
| 45478 chr10 manual_curation CDS 14757586 14757696 . + 0 Parent=GSCOCT00019402001 | |
| 45479 chr10 manual_curation CDS 14757907 14758104 . + 0 Parent=GSCOCT00019402001 | |
| 45480 chr10 manual_curation gene 14780417 14781400 . + . ID=GSCOCG00019404001;Name=Cc10_g10760 | |
| 45481 chr10 manual_curation mRNA 14780417 14781400 . + . ID=GSCOCT00019404001;Parent=GSCOCG00019404001;Name=Cc10_g10760 | |
| 45482 chr10 manual_curation polypeptide 14780417 14781400 . + . ID=GSCOCP00019404001;Derives_from=GSCOCT00019404001;Name=Cc10_g10760;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019404001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(463378..463575%2C463903..464053%2C464219..464361);owner=coffea | |
| 45483 chr10 manual_curation exon 14780417 14780614 . + . Parent=GSCOCT00019404001 | |
| 45484 chr10 manual_curation exon 14780942 14781092 . + . Parent=GSCOCT00019404001 | |
| 45485 chr10 manual_curation exon 14781258 14781400 . + . Parent=GSCOCT00019404001 | |
| 45486 chr10 manual_curation CDS 14780417 14780614 . + 0 Parent=GSCOCT00019404001 | |
| 45487 chr10 manual_curation CDS 14780942 14781092 . + 0 Parent=GSCOCT00019404001 | |
| 45488 chr10 manual_curation CDS 14781258 14781400 . + 1 Parent=GSCOCT00019404001 | |
| 45489 chr10 manual_curation gene 14831920 14833609 . + . ID=GSCOCG00019406001;Name=Cc10_g10770 | |
| 45490 chr10 manual_curation mRNA 14831920 14833609 . + . ID=GSCOCT00019406001;Parent=GSCOCG00019406001;Name=Cc10_g10770 | |
| 45491 chr10 manual_curation polypeptide 14831920 14833609 . + . ID=GSCOCP00019406001;Dbxref=InterPro:IPR001611,PFAM:PF00560,SwissProt:Q9FZ59,TAIR:AT3G05650.1,TAIR:AT3G05660.1,TAIR:AT5G40170.1,TrEMBL:B9NEA3,TrEMBL:D7U7C6,TrEMBL:D8R5G5;Derives_from=GSCOCT00019406001;Name=Cc10_g10770;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative receptor like protein 32,CC_functional_completeness:fragment,CC_gene:PEPR2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019406001~ Putative receptor like protein 32~ PEPR2~ fragment;original_location=join(514881..514955%2C515244..515355%2C516452..516570);owner=coffea | |
| 45492 chr10 manual_curation exon 14831920 14831994 . + . Parent=GSCOCT00019406001 | |
| 45493 chr10 manual_curation exon 14832283 14832394 . + . Parent=GSCOCT00019406001 | |
| 45494 chr10 manual_curation exon 14833491 14833609 . + . Parent=GSCOCT00019406001 | |
| 45495 chr10 manual_curation CDS 14831920 14831994 . + 0 Parent=GSCOCT00019406001 | |
| 45496 chr10 manual_curation CDS 14832283 14832394 . + 0 Parent=GSCOCT00019406001 | |
| 45497 chr10 manual_curation CDS 14833491 14833609 . + 1 Parent=GSCOCT00019406001 | |
| 45498 chr10 manual_curation gene 14856722 14859655 . + . ID=GSCOCG00019409001;Name=Cc10_g10780 | |
| 45499 chr10 manual_curation mRNA 14856722 14859655 . + . ID=GSCOCT00019409001;Parent=GSCOCG00019409001;Name=Cc10_g10780 | |
| 45500 chr10 manual_curation polypeptide 14856937 14858260 . + . ID=GSCOCP00019409001;Dbxref=TAIR:AT1G71950.1;Derives_from=GSCOCT00019409001;Name=Cc10_g10780;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019409001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(539898..540031%2C541026..541221);owner=coffea | |
| 45501 chr10 manual_curation exon 14856722 14857070 . + . Parent=GSCOCT00019409001 | |
| 45502 chr10 manual_curation exon 14858065 14859655 . + . Parent=GSCOCT00019409001 | |
| 45503 chr10 manual_curation CDS 14856937 14857070 . + 0 Parent=GSCOCT00019409001 | |
| 45504 chr10 manual_curation CDS 14858065 14858260 . + 2 Parent=GSCOCT00019409001 | |
| 45505 chr10 manual_curation gene 14990771 14991013 . - . ID=GSCOCG00019412001;Name=Cc10_g10790 | |
| 45506 chr10 manual_curation mRNA 14990771 14991013 . - . ID=GSCOCT00019412001;Parent=GSCOCG00019412001;Name=Cc10_g10790 | |
| 45507 chr10 manual_curation polypeptide 14990771 14991013 . - . ID=GSCOCP00019412001;Derives_from=GSCOCT00019412001;Name=Cc10_g10790;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019412001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(673732..673974);owner=coffea | |
| 45508 chr10 manual_curation exon 14990771 14991013 . - . Parent=GSCOCT00019412001 | |
| 45509 chr10 manual_curation CDS 14990771 14991013 . - 0 Parent=GSCOCT00019412001 | |
| 45510 chr10 manual_curation gene 15125366 15125620 . - . ID=GSCOCG00019414001;Name=Cc10_g10800 | |
| 45511 chr10 manual_curation mRNA 15125366 15125620 . - . ID=GSCOCT00019414001;Parent=GSCOCG00019414001;Name=Cc10_g10800 | |
| 45512 chr10 manual_curation polypeptide 15125366 15125620 . - . ID=GSCOCP00019414001;Dbxref=TrEMBL:F6HUP8,TrEMBL:Q9SDR6,TrEMBL:Q9SDR7;Derives_from=GSCOCT00019414001;Name=Cc10_g10800;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Dirigent protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019414001~ Dirigent protein~ unknown_gene~ fragment;original_location=complement(808327..808581);owner=coffea | |
| 45513 chr10 manual_curation exon 15125366 15125620 . - . Parent=GSCOCT00019414001 | |
| 45514 chr10 manual_curation CDS 15125366 15125620 . - 0 Parent=GSCOCT00019414001 | |
| 45515 chr10 manual_curation gene 15131225 15132171 . + . ID=GSCOCG00019415001;Name=Cc10_g10810 | |
| 45516 chr10 manual_curation mRNA 15131225 15132171 . + . ID=GSCOCT00019415001;Parent=GSCOCG00019415001;Name=Cc10_g10810 | |
| 45517 chr10 manual_curation polypeptide 15131225 15132171 . + . ID=GSCOCP00019415001;Dbxref=InterPro:IPR002715,PFAM:PF01849,PROFILE:PS51151,SwissProt:P20290,SwissProt:Q0CGL5,SwissProt:Q64152,TAIR:AT1G17880.1,TAIR:AT1G73230.1,TrEMBL:F4AC24,TrEMBL:Q74I55,TrEMBL:Q74L34;Derives_from=GSCOCT00019415001;Name=Cc10_g10810;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative cell-wall-anchored protein (LPXTG motif),CC_functional_completeness:complete,CC_gene:egd1,CC_gene:Btf3,CC_gene:BTF3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019415001~ Putative cell-wall-anchored protein (LPXTG motif)~ egd1~ complete;original_location=join(814186..814366%2C814462..815132);owner=coffea | |
| 45518 chr10 manual_curation exon 15131225 15131405 . + . Parent=GSCOCT00019415001 | |
| 45519 chr10 manual_curation exon 15131501 15132171 . + . Parent=GSCOCT00019415001 | |
| 45520 chr10 manual_curation CDS 15131225 15131405 . + 0 Parent=GSCOCT00019415001 | |
| 45521 chr10 manual_curation CDS 15131501 15132171 . + 1 Parent=GSCOCT00019415001 | |
| 45522 chr10 manual_curation gene 15277120 15277894 . - . ID=GSCOCG00019419001;Name=Cc10_g10820 | |
| 45523 chr10 manual_curation mRNA 15277120 15277894 . - . ID=GSCOCT00019419001;Parent=GSCOCG00019419001;Name=Cc10_g10820 | |
| 45524 chr10 manual_curation polypeptide 15277120 15277894 . - . ID=GSCOCP00019419001;Dbxref=InterPro:IPR002715,PFAM:PF01849,PROFILE:PS51151,SwissProt:A6R5Z3,SwissProt:Q0CGL5,SwissProt:Q2U6N1,TAIR:AT1G17880.1,TAIR:AT1G73230.1,TrEMBL:D7TXR6,TrEMBL:O24121,TrEMBL:Q1W1W5;Derives_from=GSCOCT00019419001;Name=Cc10_g10820;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Nascent polypeptide-associated complex subunit beta,CC_functional_completeness:fragment,CC_gene:egd1,CC_gene:EGD1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019419001~ Nascent polypeptide-associated complex subunit beta~ egd1~ fragment;original_location=complement(join(960824..960855%2C960262..960410%2C960081..960166));owner=coffea | |
| 45525 chr10 manual_curation exon 15277120 15277205 . - . Parent=GSCOCT00019419001 | |
| 45526 chr10 manual_curation exon 15277301 15277449 . - . Parent=GSCOCT00019419001 | |
| 45527 chr10 manual_curation exon 15277863 15277894 . - . Parent=GSCOCT00019419001 | |
| 45528 chr10 manual_curation CDS 15277120 15277205 . - 1 Parent=GSCOCT00019419001 | |
| 45529 chr10 manual_curation CDS 15277301 15277449 . - 2 Parent=GSCOCT00019419001 | |
| 45530 chr10 manual_curation CDS 15277863 15277894 . - 0 Parent=GSCOCT00019419001 | |
| 45531 chr10 manual_curation gene 15347234 15360580 . + . ID=GSCOCG00002512001;Name=Cc10_g10830 | |
| 45532 chr10 manual_curation mRNA 15347234 15360580 . + . ID=GSCOCT00002512001;Parent=GSCOCG00002512001;Name=Cc10_g10830 | |
| 45533 chr10 manual_curation polypeptide 15347646 15360279 . + . ID=GSCOCP00002512001;Dbxref=InterPro:IPR010748,InterPro:IPR020795,PANTHER:PTHR12748,PFAM:PF07034,SwissProt:Q32PJ3,SwissProt:Q4R180,SwissProt:Q9UBD5,TAIR:AT5G16690.1,TrEMBL:B9I729,TrEMBL:B9S268,TrEMBL:D7M872;Derives_from=GSCOCT00002512001;Name=Cc10_g10830;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0005664,GO:0006260,CC_EC_number:missing_EC_number,PRODUCT:Putative origin recognition complex subunit 3,CC_functional_completeness:complete,CC_gene:ORC3,CC_gene:Orc3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00002512001~ Putative origin recognition complex subunit 3~ ORC3~ complete;original_location=join(21479..21523%2C21952..22140%2C22239..22425%2C22898..23067%2C23169..23299%2C24497..24770%2C24874..24951%2C25224..25300%2C25409..25496%2C26000..26211%2C27126..27195%2C30549..30634%2C30784..30873%2C31592..31667%2C32884..33011%2C33220..33402%2C34007..34112);owner=coffea | |
| 45534 chr10 manual_curation exon 15347234 15347469 . + . Parent=GSCOCT00002512001 | |
| 45535 chr10 manual_curation exon 15347610 15347690 . + . Parent=GSCOCT00002512001 | |
| 45536 chr10 manual_curation exon 15348119 15348307 . + . Parent=GSCOCT00002512001 | |
| 45537 chr10 manual_curation exon 15348406 15348592 . + . Parent=GSCOCT00002512001 | |
| 45538 chr10 manual_curation exon 15349065 15349234 . + . Parent=GSCOCT00002512001 | |
| 45539 chr10 manual_curation exon 15349336 15349466 . + . Parent=GSCOCT00002512001 | |
| 45540 chr10 manual_curation exon 15350664 15350937 . + . Parent=GSCOCT00002512001 | |
| 45541 chr10 manual_curation exon 15351041 15351118 . + . Parent=GSCOCT00002512001 | |
| 45542 chr10 manual_curation exon 15351391 15351467 . + . Parent=GSCOCT00002512001 | |
| 45543 chr10 manual_curation exon 15351576 15351663 . + . Parent=GSCOCT00002512001 | |
| 45544 chr10 manual_curation exon 15352167 15352378 . + . Parent=GSCOCT00002512001 | |
| 45545 chr10 manual_curation exon 15353293 15353362 . + . Parent=GSCOCT00002512001 | |
| 45546 chr10 manual_curation exon 15356716 15356801 . + . Parent=GSCOCT00002512001 | |
| 45547 chr10 manual_curation exon 15356951 15357040 . + . Parent=GSCOCT00002512001 | |
| 45548 chr10 manual_curation exon 15357759 15357834 . + . Parent=GSCOCT00002512001 | |
| 45549 chr10 manual_curation exon 15359051 15359178 . + . Parent=GSCOCT00002512001 | |
| 45550 chr10 manual_curation exon 15359387 15359569 . + . Parent=GSCOCT00002512001 | |
| 45551 chr10 manual_curation exon 15360174 15360580 . + . Parent=GSCOCT00002512001 | |
| 45552 chr10 manual_curation CDS 15347646 15347690 . + 0 Parent=GSCOCT00002512001 | |
| 45553 chr10 manual_curation CDS 15348119 15348307 . + 0 Parent=GSCOCT00002512001 | |
| 45554 chr10 manual_curation CDS 15348406 15348592 . + 0 Parent=GSCOCT00002512001 | |
| 45555 chr10 manual_curation CDS 15349065 15349234 . + 1 Parent=GSCOCT00002512001 | |
| 45556 chr10 manual_curation CDS 15349336 15349466 . + 0 Parent=GSCOCT00002512001 | |
| 45557 chr10 manual_curation CDS 15350664 15350937 . + 2 Parent=GSCOCT00002512001 | |
| 45558 chr10 manual_curation CDS 15351041 15351118 . + 0 Parent=GSCOCT00002512001 | |
| 45559 chr10 manual_curation CDS 15351391 15351467 . + 0 Parent=GSCOCT00002512001 | |
| 45560 chr10 manual_curation CDS 15351576 15351663 . + 2 Parent=GSCOCT00002512001 | |
| 45561 chr10 manual_curation CDS 15352167 15352378 . + 0 Parent=GSCOCT00002512001 | |
| 45562 chr10 manual_curation CDS 15353293 15353362 . + 2 Parent=GSCOCT00002512001 | |
| 45563 chr10 manual_curation CDS 15356716 15356801 . + 0 Parent=GSCOCT00002512001 | |
| 45564 chr10 manual_curation CDS 15356951 15357040 . + 2 Parent=GSCOCT00002512001 | |
| 45565 chr10 manual_curation CDS 15357759 15357834 . + 2 Parent=GSCOCT00002512001 | |
| 45566 chr10 manual_curation CDS 15359051 15359178 . + 0 Parent=GSCOCT00002512001 | |
| 45567 chr10 manual_curation CDS 15359387 15359569 . + 2 Parent=GSCOCT00002512001 | |
| 45568 chr10 manual_curation CDS 15360174 15360279 . + 2 Parent=GSCOCT00002512001 | |
| 45569 chr10 manual_curation gene 15474998 15478659 . - . ID=GSCOCG00016624001;Name=Cc10_g10840 | |
| 45570 chr10 manual_curation mRNA 15474998 15478659 . - . ID=GSCOCT00016624001;Parent=GSCOCG00016624001;Name=Cc10_g10840 | |
| 45571 chr10 manual_curation polypeptide 15474998 15478659 . - . ID=GSCOCP00016624001;Dbxref=InterPro:IPR005123,InterPro:IPR006620,PFAM:PF03171,SMART:SM00702,SwissProt:P16924,SwissProt:P54001,SwissProt:Q60715,TAIR:AT1G20270.1,TAIR:AT2G17720.1,TAIR:AT5G66060.1,TrEMBL:B6TYA6,TrEMBL:C5XWM8,TrEMBL:I1IEG0;Derives_from=GSCOCT00016624001;Name=Cc10_g10840;Ontology_term=CC_evidence_code:ISS,GO:0005506,GO:0016491,GO:0031418,GO:0055114,CC_EC_number:1.14.11.2,PRODUCT:Putative Prolyl 4-hydroxylase subunit alpha-1,CC_functional_completeness:fragment,CC_gene:P4ha1,CC_gene:P4HA1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016624001~ Putative Prolyl 4-hydroxylase subunit alpha-1~ P4ha1~ fragment;original_location=complement(join(97456..97490%2C97288..97378%2C96486..96583%2C96031..96128%2C95245..95332%2C94840..95021%2C93829..93926));owner=coffea | |
| 45572 chr10 manual_curation exon 15474998 15475095 . - . Parent=GSCOCT00016624001 | |
| 45573 chr10 manual_curation exon 15476009 15476190 . - . Parent=GSCOCT00016624001 | |
| 45574 chr10 manual_curation exon 15476414 15476501 . - . Parent=GSCOCT00016624001 | |
| 45575 chr10 manual_curation exon 15477200 15477297 . - . Parent=GSCOCT00016624001 | |
| 45576 chr10 manual_curation exon 15477655 15477752 . - . Parent=GSCOCT00016624001 | |
| 45577 chr10 manual_curation exon 15478457 15478547 . - . Parent=GSCOCT00016624001 | |
| 45578 chr10 manual_curation exon 15478625 15478659 . - . Parent=GSCOCT00016624001 | |
| 45579 chr10 manual_curation CDS 15474998 15475095 . - 1 Parent=GSCOCT00016624001 | |
| 45580 chr10 manual_curation CDS 15476009 15476190 . - 2 Parent=GSCOCT00016624001 | |
| 45581 chr10 manual_curation CDS 15476414 15476501 . - 1 Parent=GSCOCT00016624001 | |
| 45582 chr10 manual_curation CDS 15477200 15477297 . - 2 Parent=GSCOCT00016624001 | |
| 45583 chr10 manual_curation CDS 15477655 15477752 . - 0 Parent=GSCOCT00016624001 | |
| 45584 chr10 manual_curation CDS 15478457 15478547 . - 2 Parent=GSCOCT00016624001 | |
| 45585 chr10 manual_curation CDS 15478625 15478659 . - 0 Parent=GSCOCT00016624001 | |
| 45586 chr10 manual_curation gene 15499836 15500387 . - . ID=GSCOCG00016626001;Name=Cc10_g10850 | |
| 45587 chr10 manual_curation mRNA 15499836 15500387 . - . ID=GSCOCT00016626001;Parent=GSCOCG00016626001;Name=Cc10_g10850 | |
| 45588 chr10 manual_curation polypeptide 15499836 15500387 . - . ID=GSCOCP00016626001;Dbxref=InterPro:IPR000008,InterPro:IPR008973,InterPro:IPR018029,PFAM:PF00168,PROFILE:PS50004,SMART:SM00239,SUPERFAMILY:SSF49562,TAIR:AT1G09070.1,TrEMBL:A5C7U2,TrEMBL:F6H6B0,TrEMBL:F6H6B1;Derives_from=GSCOCT00016626001;Name=Cc10_g10850;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative soybean gene regulated by cold-2,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016626001~ Putative soybean gene regulated by cold-2~ unknown_gene~ fragment;original_location=complement(118667..119218);owner=coffea | |
| 45589 chr10 manual_curation exon 15499836 15500387 . - . Parent=GSCOCT00016626001 | |
| 45590 chr10 manual_curation CDS 15499836 15500387 . - 0 Parent=GSCOCT00016626001 | |
| 45591 chr10 manual_curation gene 15524729 15526207 . + . ID=GSCOCG00016627001;Name=Cc10_g10860 | |
| 45592 chr10 manual_curation mRNA 15524729 15526207 . + . ID=GSCOCT00016627001;Parent=GSCOCG00016627001;Name=Cc10_g10860 | |
| 45593 chr10 manual_curation polypeptide 15524729 15526207 . + . ID=GSCOCP00016627001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q9FG16,SwissProt:Q9FJY7,SwissProt:Q9FMA1,TAIR:AT5G06540.1,TAIR:AT5G56310.1,TAIR:AT5G66520.1,TIGRFAMs:TIGR00756,TrEMBL:A5BE39,TrEMBL:I1ILS3,TrEMBL:I1N7R8;Derives_from=GSCOCT00016627001;Name=Cc10_g10860;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Pentatricopeptide repeat-containing protein At5g66520,CC_functional_completeness:fragment,CC_gene:PCMP-H61,CC_gene:PCMP-E13,CC_gene:PCMP-H88;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016627001~ Putative Pentatricopeptide repeat-containing protein At5g66520~ PCMP-H61~ fragment;original_location=143560..145038;owner=coffea | |
| 45594 chr10 manual_curation exon 15524729 15526207 . + . Parent=GSCOCT00016627001 | |
| 45595 chr10 manual_curation CDS 15524729 15526207 . + 0 Parent=GSCOCT00016627001 | |
| 45596 chr10 manual_curation gene 15532343 15532864 . - . ID=GSCOCG00016629001;Name=Cc10_g10870 | |
| 45597 chr10 manual_curation mRNA 15532343 15532864 . - . ID=GSCOCT00016629001;Parent=GSCOCG00016629001;Name=Cc10_g10870 | |
| 45598 chr10 manual_curation polypeptide 15532343 15532864 . - . ID=GSCOCP00016629001;Dbxref=InterPro:IPR000008,InterPro:IPR008973,InterPro:IPR018029,PFAM:PF00168,PROFILE:PS50004,SMART:SM00239,SUPERFAMILY:SSF49562,TAIR:AT1G09070.1,TrEMBL:A5BK54,TrEMBL:A5C7U2,TrEMBL:F6H6B1;Derives_from=GSCOCT00016629001;Name=Cc10_g10870;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative soybean gene regulated by cold-2,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016629001~ Putative soybean gene regulated by cold-2~ unknown_gene~ fragment;original_location=complement(151174..151695);owner=coffea | |
| 45599 chr10 manual_curation exon 15532343 15532864 . - . Parent=GSCOCT00016629001 | |
| 45600 chr10 manual_curation CDS 15532343 15532864 . - 0 Parent=GSCOCT00016629001 | |
| 45601 chr10 manual_curation gene 15593068 15596952 . - . ID=GSCOCG00016632001;Name=Cc10_g10880 | |
| 45602 chr10 manual_curation mRNA 15593068 15596952 . - . ID=GSCOCT00016632001;Parent=GSCOCG00016632001;Name=Cc10_g10880 | |
| 45603 chr10 manual_curation polypeptide 15593103 15596952 . - . ID=GSCOCP00016632001;Dbxref=InterPro:IPR006840,PANTHER:PTHR12192,PFAM:PF04752,SwissProt:Q0IIH4,SwissProt:Q641Z5,SwissProt:Q9CQG1,TAIR:AT1G44790.1,TAIR:AT4G31290.1,TAIR:AT5G26220.1,TrEMBL:B7FMQ7,TrEMBL:E0CR82,TrEMBL:G7I8G3;Derives_from=GSCOCT00016632001;Name=Cc10_g10880;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Cation transport regulator-like protein 2,CC_functional_completeness:fragment,CC_gene:Chac2,CC_gene:CHAC2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016632001~ Putative Cation transport regulator-like protein 2~ Chac2~ fragment;original_location=complement(join(215766..215783%2C215670..215723%2C213650..213706%2C213479..213519%2C213310..213381%2C212579..212658%2C211934..212001));owner=coffea | |
| 45604 chr10 manual_curation exon 15593068 15593170 . - . Parent=GSCOCT00016632001 | |
| 45605 chr10 manual_curation exon 15593748 15593827 . - . Parent=GSCOCT00016632001 | |
| 45606 chr10 manual_curation exon 15594479 15594550 . - . Parent=GSCOCT00016632001 | |
| 45607 chr10 manual_curation exon 15594648 15594688 . - . Parent=GSCOCT00016632001 | |
| 45608 chr10 manual_curation exon 15594819 15594875 . - . Parent=GSCOCT00016632001 | |
| 45609 chr10 manual_curation exon 15596839 15596892 . - . Parent=GSCOCT00016632001 | |
| 45610 chr10 manual_curation exon 15596935 15596952 . - . Parent=GSCOCT00016632001 | |
| 45611 chr10 manual_curation CDS 15593103 15593170 . - 1 Parent=GSCOCT00016632001 | |
| 45612 chr10 manual_curation CDS 15593748 15593827 . - 2 Parent=GSCOCT00016632001 | |
| 45613 chr10 manual_curation CDS 15594479 15594550 . - 2 Parent=GSCOCT00016632001 | |
| 45614 chr10 manual_curation CDS 15594648 15594688 . - 0 Parent=GSCOCT00016632001 | |
| 45615 chr10 manual_curation CDS 15594819 15594875 . - 0 Parent=GSCOCT00016632001 | |
| 45616 chr10 manual_curation CDS 15596839 15596892 . - 0 Parent=GSCOCT00016632001 | |
| 45617 chr10 manual_curation CDS 15596935 15596952 . - 0 Parent=GSCOCT00016632001 | |
| 45618 chr10 manual_curation gene 15597016 15597788 . - . ID=GSCOCG00016633001;Name=Cc10_g10890 | |
| 45619 chr10 manual_curation mRNA 15597016 15597788 . - . ID=GSCOCT00016633001;Parent=GSCOCG00016633001;Name=Cc10_g10890 | |
| 45620 chr10 manual_curation polypeptide 15597016 15597658 . - . ID=GSCOCP00016633001;Derives_from=GSCOCT00016633001;Name=Cc10_g10890;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016633001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(216430..216489%2C216279..216355%2C215847..215895));owner=coffea | |
| 45621 chr10 manual_curation exon 15597016 15597064 . - . Parent=GSCOCT00016633001 | |
| 45622 chr10 manual_curation exon 15597448 15597524 . - . Parent=GSCOCT00016633001 | |
| 45623 chr10 manual_curation exon 15597599 15597788 . - . Parent=GSCOCT00016633001 | |
| 45624 chr10 manual_curation CDS 15597016 15597064 . - 2 Parent=GSCOCT00016633001 | |
| 45625 chr10 manual_curation CDS 15597448 15597524 . - 0 Parent=GSCOCT00016633001 | |
| 45626 chr10 manual_curation CDS 15597599 15597658 . - 0 Parent=GSCOCT00016633001 | |
| 45627 chr10 manual_curation gene 15696604 15697338 . - . ID=GSCOCG00016635001;Name=Cc10_g10900 | |
| 45628 chr10 manual_curation mRNA 15696604 15697338 . - . ID=GSCOCT00016635001;Parent=GSCOCG00016635001;Name=Cc10_g10900 | |
| 45629 chr10 manual_curation polypeptide 15696604 15697338 . - . ID=GSCOCP00016635001;Dbxref=GENE3D:G3DSA:1.10.20.10,InterPro:IPR003957,InterPro:IPR003958,InterPro:IPR009072,PANTHER:PTHR11064:SF9,PFAM:PF00808,PRINTS:PR00615,SUPERFAMILY:SSF47113,SwissProt:O82248,SwissProt:Q84W66,SwissProt:Q9SFD8,TAIR:AT1G21970.1,TAIR:AT2G47810.1,TAIR:AT5G47670.1,TrEMBL:B5KMS9,TrEMBL:C6T0M9,TrEMBL:E0ADH2;Derives_from=GSCOCT00016635001;Name=Cc10_g10900;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0005622,GO:0043565,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:NFYB9,CC_gene:NFYB6,CC_gene:NFYB5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016635001~ Hypothetical protein~ NFYB9~ missing_functional_completeness;original_location=complement(315435..316169);owner=coffea | |
| 45630 chr10 manual_curation exon 15696604 15697338 . - . Parent=GSCOCT00016635001 | |
| 45631 chr10 manual_curation CDS 15696604 15697338 . - 0 Parent=GSCOCT00016635001 | |
| 45632 chr10 manual_curation gene 15721744 15722701 . - . ID=GSCOCG00016638001;Name=Cc10_g10910 | |
| 45633 chr10 manual_curation mRNA 15721744 15722701 . - . ID=GSCOCT00016638001;Parent=GSCOCG00016638001;Name=Cc10_g10910 | |
| 45634 chr10 manual_curation polypeptide 15721744 15722701 . - . ID=GSCOCP00016638001;Dbxref=InterPro:IPR001208,PFAM:PF00493,SwissProt:P55862,SwissProt:Q6PCI7,SwissProt:Q9VGW6,TAIR:AT2G07690.1,TrEMBL:A5BH17,TrEMBL:D7T529,TrEMBL:I1MTX9;Derives_from=GSCOCT00016638001;Name=Cc10_g10910;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0005524,GO:0006260,CC_EC_number:missing_EC_number,PRODUCT:DNA replication licensing factor Mcm5,CC_functional_completeness:fragment,CC_gene:Mcm5,CC_gene:mcm5-a,CC_gene:mcm5-b;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016638001~ DNA replication licensing factor Mcm5~ Mcm5~ fragment;original_location=complement(join(341492..341532%2C341158..341248%2C340575..340688));owner=coffea | |
| 45635 chr10 manual_curation exon 15721744 15721857 . - . Parent=GSCOCT00016638001 | |
| 45636 chr10 manual_curation exon 15722327 15722417 . - . Parent=GSCOCT00016638001 | |
| 45637 chr10 manual_curation exon 15722661 15722701 . - . Parent=GSCOCT00016638001 | |
| 45638 chr10 manual_curation CDS 15721744 15721857 . - 0 Parent=GSCOCT00016638001 | |
| 45639 chr10 manual_curation CDS 15722327 15722417 . - 2 Parent=GSCOCT00016638001 | |
| 45640 chr10 manual_curation CDS 15722661 15722701 . - 0 Parent=GSCOCT00016638001 | |
| 45641 chr10 manual_curation gene 15773219 15778445 . - . ID=GSCOCG00016644001;Name=Cc10_g10920 | |
| 45642 chr10 manual_curation mRNA 15773219 15778445 . - . ID=GSCOCT00016644001;Parent=GSCOCG00016644001;Name=Cc10_g10920 | |
| 45643 chr10 manual_curation polypeptide 15773393 15778445 . - . ID=GSCOCP00016644001;Dbxref=InterPro:IPR000620,PFAM:PF00892,SwissProt:Q6J163,TAIR:AT1G21890.1,TAIR:AT1G44800.1,TAIR:AT4G08300.1,TrEMBL:A7L2Z5,TrEMBL:B9GU55,TrEMBL:E0CR83;Derives_from=GSCOCT00016644001;Name=Cc10_g10920;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative Auxin-induced protein 5NG4,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016644001~ Putative Auxin-induced protein 5NG4~ unknown_gene~ complete;original_location=complement(join(397062..397276%2C396568..396630%2C395002..395118%2C394386..394626%2C393722..393880%2C392977..393128%2C392224..392425));owner=coffea | |
| 45644 chr10 manual_curation exon 15773219 15773594 . - . Parent=GSCOCT00016644001 | |
| 45645 chr10 manual_curation exon 15774146 15774297 . - . Parent=GSCOCT00016644001 | |
| 45646 chr10 manual_curation exon 15774891 15775049 . - . Parent=GSCOCT00016644001 | |
| 45647 chr10 manual_curation exon 15775555 15775795 . - . Parent=GSCOCT00016644001 | |
| 45648 chr10 manual_curation exon 15776171 15776287 . - . Parent=GSCOCT00016644001 | |
| 45649 chr10 manual_curation exon 15777737 15777799 . - . Parent=GSCOCT00016644001 | |
| 45650 chr10 manual_curation exon 15778231 15778445 . - . Parent=GSCOCT00016644001 | |
| 45651 chr10 manual_curation CDS 15773393 15773594 . - 2 Parent=GSCOCT00016644001 | |
| 45652 chr10 manual_curation CDS 15774146 15774297 . - 0 Parent=GSCOCT00016644001 | |
| 45653 chr10 manual_curation CDS 15774891 15775049 . - 0 Parent=GSCOCT00016644001 | |
| 45654 chr10 manual_curation CDS 15775555 15775795 . - 2 Parent=GSCOCT00016644001 | |
| 45655 chr10 manual_curation CDS 15776171 15776287 . - 2 Parent=GSCOCT00016644001 | |
| 45656 chr10 manual_curation CDS 15777737 15777799 . - 2 Parent=GSCOCT00016644001 | |
| 45657 chr10 manual_curation CDS 15778231 15778445 . - 0 Parent=GSCOCT00016644001 | |
| 45658 chr10 manual_curation gene 15814757 15817125 . + . ID=GSCOCG00016645001;Name=Cc10_g10930 | |
| 45659 chr10 manual_curation mRNA 15814757 15817125 . + . ID=GSCOCT00016645001;Parent=GSCOCG00016645001;Name=Cc10_g10930 | |
| 45660 chr10 manual_curation polypeptide 15814757 15817125 . + . ID=GSCOCP00016645001;Dbxref=GENE3D:G3DSA:3.40.30.10,InterPro:IPR008554,InterPro:IPR012335,InterPro:IPR012336,PFAM:PF05768,SUPERFAMILY:SSF52833,TAIR:AT4G08280.1,TrEMBL:F6H0S7,TrEMBL:G7J322,TrEMBL:I1JZ82;Derives_from=GSCOCT00016645001;Name=Cc10_g10930;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016645001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=join(433588..433878%2C433970..434059%2C435879..435956);owner=coffea | |
| 45661 chr10 manual_curation exon 15814757 15815047 . + . Parent=GSCOCT00016645001 | |
| 45662 chr10 manual_curation exon 15815139 15815228 . + . Parent=GSCOCT00016645001 | |
| 45663 chr10 manual_curation exon 15817048 15817125 . + . Parent=GSCOCT00016645001 | |
| 45664 chr10 manual_curation CDS 15814757 15815047 . + 0 Parent=GSCOCT00016645001 | |
| 45665 chr10 manual_curation CDS 15815139 15815228 . + 0 Parent=GSCOCT00016645001 | |
| 45666 chr10 manual_curation CDS 15817048 15817125 . + 0 Parent=GSCOCT00016645001 | |
| 45667 chr10 manual_curation gene 15817585 15822510 . - . ID=GSCOCG00016647001;Name=Cc10_g10940 | |
| 45668 chr10 manual_curation mRNA 15817585 15822510 . - . ID=GSCOCT00016647001;Parent=GSCOCG00016647001;Name=Cc10_g10940 | |
| 45669 chr10 manual_curation polypeptide 15817639 15822310 . - . ID=GSCOCP00016647001;Dbxref=InterPro:IPR000348,InterPro:IPR009038,PFAM:PF01105,PROFILE:PS50866,SwissProt:Q5E971,SwissProt:Q63584,SwissProt:Q9D1D4,TAIR:AT1G09580.1,TAIR:AT1G21900.1,TAIR:AT1G57620.1,TrEMBL:A5AQJ6,TrEMBL:D7KKV6,TrEMBL:F6H957;Derives_from=GSCOCT00016647001;Name=Cc10_g10940;Ontology_term=CC_evidence_code:ISS,GO:0006810,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Putative Transmembrane emp24 domain-containing protein 10,CC_functional_completeness:complete,CC_gene:Tmed10,CC_gene:TMED10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016647001~ Putative Transmembrane emp24 domain-containing protein 10~ Tmed10~ complete;original_location=complement(join(440980..441141%2C437312..437524%2C437038..437114%2C436470..436614));owner=coffea | |
| 45670 chr10 manual_curation exon 15817585 15817783 . - . Parent=GSCOCT00016647001 | |
| 45671 chr10 manual_curation exon 15818207 15818283 . - . Parent=GSCOCT00016647001 | |
| 45672 chr10 manual_curation exon 15818481 15818693 . - . Parent=GSCOCT00016647001 | |
| 45673 chr10 manual_curation exon 15822149 15822510 . - . Parent=GSCOCT00016647001 | |
| 45674 chr10 manual_curation CDS 15817639 15817783 . - 2 Parent=GSCOCT00016647001 | |
| 45675 chr10 manual_curation CDS 15818207 15818283 . - 0 Parent=GSCOCT00016647001 | |
| 45676 chr10 manual_curation CDS 15818481 15818693 . - 0 Parent=GSCOCT00016647001 | |
| 45677 chr10 manual_curation CDS 15822149 15822310 . - 0 Parent=GSCOCT00016647001 | |
| 45678 chr10 manual_curation gene 15864135 15869291 . + . ID=GSCOCG00016649001;Name=Cc10_g10950 | |
| 45679 chr10 manual_curation mRNA 15864135 15869291 . + . ID=GSCOCT00016649001;Parent=GSCOCG00016649001;Name=Cc10_g10950 | |
| 45680 chr10 manual_curation polypeptide 15864279 15868927 . + . ID=GSCOCP00016649001;Dbxref=InterPro:IPR001261,InterPro:IPR002933,InterPro:IPR010159,InterPro:IPR011650,PFAM:PF01546,PFAM:PF07687,PIR:PIRSF036696,PROSITE:PS00759,SwissProt:Q6AYS7,SwissProt:Q6PTT0,SwissProt:Q99JW2,TAIR:AT1G44180.1,TAIR:AT1G44820.1,TAIR:AT4G38220.2,TIGRFAMs:TIGR01880,TrEMBL:B9GU58,TrEMBL:F6H0T0,TrEMBL:Q9LPE9;Derives_from=GSCOCT00016649001;Name=Cc10_g10950;Ontology_term=CC_evidence_code:ISS,GO:0004046,GO:0005515,GO:0005737,GO:0006508,GO:0006520,GO:0008152,GO:0008237,GO:0016787,CC_EC_number:3.5.1.14,CC_EC_number:3.5.1.14,PRODUCT:Putative Aminoacylase-1A,CC_functional_completeness:complete,CC_gene:Acy1a,CC_gene:Acy1,CC_gene:Acy1b;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016649001~ Putative Aminoacylase-1A~ Acy1a~ complete;original_location=join(483110..484000%2C484089..484226%2C487342..487581%2C487672..487758);owner=coffea | |
| 45681 chr10 manual_curation exon 15869059 15869291 . + . Parent=GSCOCT00016649001 | |
| 45682 chr10 manual_curation exon 15864135 15865169 . + . Parent=GSCOCT00016649001 | |
| 45683 chr10 manual_curation exon 15865258 15865395 . + . Parent=GSCOCT00016649001 | |
| 45684 chr10 manual_curation exon 15868511 15868750 . + . Parent=GSCOCT00016649001 | |
| 45685 chr10 manual_curation exon 15868841 15868959 . + . Parent=GSCOCT00016649001 | |
| 45686 chr10 manual_curation CDS 15864279 15865169 . + 0 Parent=GSCOCT00016649001 | |
| 45687 chr10 manual_curation CDS 15865258 15865395 . + 0 Parent=GSCOCT00016649001 | |
| 45688 chr10 manual_curation CDS 15868511 15868750 . + 0 Parent=GSCOCT00016649001 | |
| 45689 chr10 manual_curation CDS 15868841 15868927 . + 0 Parent=GSCOCT00016649001 | |
| 45690 chr10 manual_curation gene 15890639 15891858 . + . ID=GSCOCG00016651001;Name=Cc10_g10960 | |
| 45691 chr10 manual_curation mRNA 15890639 15891858 . + . ID=GSCOCT00016651001;Parent=GSCOCG00016651001;Name=Cc10_g10960 | |
| 45692 chr10 manual_curation polypeptide 15890772 15891521 . + . ID=GSCOCP00016651001;Dbxref=GENE3D:G3DSA:3.30.730.10,InterPro:IPR001471,InterPro:IPR016177,PFAM:PF00847,PRINTS:PR00367,PROFILE:PS51032,SMART:SM00380,SUPERFAMILY:SSF54171,SwissProt:Q9CAP4,SwissProt:Q9LPE8,SwissProt:Q9SFE4,TAIR:AT1G21910.1,TAIR:AT1G44830.1,TAIR:AT1G77640.1,TrEMBL:B9GU59,TrEMBL:C9WA63,TrEMBL:C9WA64;Derives_from=GSCOCT00016651001;Name=Cc10_g10960;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,CC_EC_number:missing_EC_number,PRODUCT:Putative Ethylene-responsive transcription factor ERF014,CC_functional_completeness:complete,CC_gene:ERF012,CC_gene:ERF013,CC_gene:ERF014;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016651001~ Putative Ethylene-responsive transcription factor ERF014~ ERF012~ complete;original_location=509603..510352;owner=coffea | |
| 45693 chr10 manual_curation exon 15890639 15891858 . + . Parent=GSCOCT00016651001 | |
| 45694 chr10 manual_curation CDS 15890772 15891521 . + 0 Parent=GSCOCT00016651001 | |
| 45695 chr10 manual_curation gene 15902372 15903388 . - . ID=GSCOCG00016652001;Name=Cc10_g10970 | |
| 45696 chr10 manual_curation mRNA 15902372 15903388 . - . ID=GSCOCT00016652001;Parent=GSCOCG00016652001;Name=Cc10_g10970 | |
| 45697 chr10 manual_curation polypeptide 15902372 15903388 . - . ID=GSCOCP00016652001;Dbxref=InterPro:IPR001841,InterPro:IPR018957,PFAM:PF00097,PROFILE:PS50089,SMART:SM00184,SwissProt:P0CH30,SwissProt:Q6DIP3,SwissProt:Q8LPN7,TAIR:AT1G60360.1,TAIR:AT2G40830.2,TAIR:AT3G56580.2,TrEMBL:A5BJX3,TrEMBL:B9RJ66,TrEMBL:F6H0T2;Derives_from=GSCOCT00016652001;Name=Cc10_g10970;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative E3 ubiquitin-protein ligase RING1,CC_functional_completeness:complete,CC_gene:RING1,CC_gene:At3g19950,CC_gene:rnf126;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016652001~ Putative E3 ubiquitin-protein ligase RING1~ RING1~ complete;original_location=complement(521203..522219);owner=coffea | |
| 45698 chr10 manual_curation exon 15902372 15903388 . - . Parent=GSCOCT00016652001 | |
| 45699 chr10 manual_curation CDS 15902372 15903388 . - 0 Parent=GSCOCT00016652001 | |
| 45700 chr10 manual_curation gene 15958667 15960997 . - . ID=GSCOCG00016654001;Name=Cc10_g10980 | |
| 45701 chr10 manual_curation mRNA 15958667 15960997 . - . ID=GSCOCT00016654001;Parent=GSCOCG00016654001;Name=Cc10_g10980 | |
| 45702 chr10 manual_curation polypeptide 15958856 15960997 . - . ID=GSCOCP00016654001;Dbxref=InterPro:IPR003409,PFAM:PF02493,SMART:SM00698,SwissProt:Q56YP2,SwissProt:Q8L796,SwissProt:Q9SLG9,TAIR:AT1G21920.1,TAIR:AT1G77660.1,TAIR:AT4G17080.1,TrEMBL:B9H7C8,TrEMBL:B9RJ65,TrEMBL:F6H0T3;Derives_from=GSCOCT00016654001;Name=Cc10_g10980;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Phosphatidylinositol 4-phosphate 5-kinase 5,CC_functional_completeness:fragment,CC_gene:PIP5K1,CC_gene:PIP5K5,CC_gene:PIP5K2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016654001~ Putative Phosphatidylinositol 4-phosphate 5-kinase 5~ PIP5K1~ fragment;original_location=complement(join(578915..579828%2C577965..578193%2C577687..577851));owner=coffea | |
| 45703 chr10 manual_curation exon 15958667 15959020 . - . Parent=GSCOCT00016654001 | |
| 45704 chr10 manual_curation exon 15959134 15959362 . - . Parent=GSCOCT00016654001 | |
| 45705 chr10 manual_curation exon 15960084 15960997 . - . Parent=GSCOCT00016654001 | |
| 45706 chr10 manual_curation CDS 15958856 15959020 . - 0 Parent=GSCOCT00016654001 | |
| 45707 chr10 manual_curation CDS 15959134 15959362 . - 2 Parent=GSCOCT00016654001 | |
| 45708 chr10 manual_curation CDS 15960084 15960997 . - 0 Parent=GSCOCT00016654001 | |
| 45709 chr10 manual_curation gene 16048120 16053978 . - . ID=GSCOCG00016656001;Name=Cc10_g10990 | |
| 45710 chr10 manual_curation mRNA 16048120 16053978 . - . ID=GSCOCT00016656001;Parent=GSCOCG00016656001;Name=Cc10_g10990 | |
| 45711 chr10 manual_curation polypeptide 16048309 16053714 . - . ID=GSCOCP00016656001;Dbxref=GENE3D:G3DSA:3.40.640.10,InterPro:IPR001176,InterPro:IPR004839,InterPro:IPR015421,InterPro:IPR015424,PFAM:PF00155,PRINTS:PR00753,SUPERFAMILY:SSF53383,SwissProt:O53870,SwissProt:P77806,SwissProt:Q54KM6,TAIR:AT1G77670.1,TAIR:AT2G22250.2,TAIR:AT5G36160.1,TrEMBL:B9H7C6,TrEMBL:B9RJ63,TrEMBL:E0CR92;Derives_from=GSCOCT00016656001;Name=Cc10_g10990;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0009058,GO:0016847,GO:0030170,CC_EC_number:2.6.1.1,PRODUCT:Putative Methionine aminotransferase,CC_functional_completeness:complete,CC_gene:ybdL,CC_gene:dapC,CC_gene:ccbl;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016656001~ Putative Methionine aminotransferase~ ybdL~ complete;original_location=complement(join(672447..672545%2C667140..668294));owner=coffea | |
| 45712 chr10 manual_curation exon 16048120 16049463 . - . Parent=GSCOCT00016656001 | |
| 45713 chr10 manual_curation exon 16053616 16053978 . - . Parent=GSCOCT00016656001 | |
| 45714 chr10 manual_curation CDS 16048309 16049463 . - 0 Parent=GSCOCT00016656001 | |
| 45715 chr10 manual_curation CDS 16053616 16053714 . - 0 Parent=GSCOCT00016656001 | |
| 45716 chr10 manual_curation gene 16213428 16217059 . - . ID=GSCOCG00016661001;Name=Cc10_g11000 | |
| 45717 chr10 manual_curation mRNA 16213428 16217059 . - . ID=GSCOCT00016661001;Parent=GSCOCG00016661001;Name=Cc10_g11000 | |
| 45718 chr10 manual_curation polypeptide 16213586 16217028 . - . ID=GSCOCP00016661001;Dbxref=TAIR:AT4G08240.2,TrEMBL:C6SVT4,TrEMBL:E0CR94,TrEMBL:I1MAK5;Derives_from=GSCOCT00016661001;Name=Cc10_g11000;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B Has 33 Blast hits to 33 proteins in 12 species,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016661001~ unknown protein%3B Has 33 Blast hits to 33 proteins in 12 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 33%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(835692..835859%2C832843..832911%2C832417..832620));owner=coffea | |
| 45719 chr10 manual_curation exon 16213428 16213789 . - . Parent=GSCOCT00016661001 | |
| 45720 chr10 manual_curation exon 16214012 16214080 . - . Parent=GSCOCT00016661001 | |
| 45721 chr10 manual_curation exon 16216861 16217059 . - . Parent=GSCOCT00016661001 | |
| 45722 chr10 manual_curation CDS 16213586 16213789 . - 0 Parent=GSCOCT00016661001 | |
| 45723 chr10 manual_curation CDS 16214012 16214080 . - 0 Parent=GSCOCT00016661001 | |
| 45724 chr10 manual_curation CDS 16216861 16217028 . - 0 Parent=GSCOCT00016661001 | |
| 45725 chr10 manual_curation gene 16297724 16300127 . - . ID=GSCOCG00016664001;Name=Cc10_g11010 | |
| 45726 chr10 manual_curation mRNA 16297724 16300127 . - . ID=GSCOCT00016664001;Parent=GSCOCG00016664001;Name=Cc10_g11010 | |
| 45727 chr10 manual_curation polypeptide 16297724 16300127 . - . ID=GSCOCP00016664001;Dbxref=TrEMBL:B9H7C4,TrEMBL:F2DUV7,TrEMBL:G7K8W3;Derives_from=GSCOCT00016664001;Name=Cc10_g11010;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Predicted protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016664001~ Putative Predicted protein~ unknown_gene~ fragment;original_location=complement(join(918594..918958%2C918407..918497%2C916555..917004));owner=coffea | |
| 45728 chr10 manual_curation exon 16297724 16298173 . - . Parent=GSCOCT00016664001 | |
| 45729 chr10 manual_curation exon 16299576 16299666 . - . Parent=GSCOCT00016664001 | |
| 45730 chr10 manual_curation exon 16299763 16300127 . - . Parent=GSCOCT00016664001 | |
| 45731 chr10 manual_curation CDS 16297724 16298173 . - 0 Parent=GSCOCT00016664001 | |
| 45732 chr10 manual_curation CDS 16299576 16299666 . - 2 Parent=GSCOCT00016664001 | |
| 45733 chr10 manual_curation CDS 16299763 16300127 . - 0 Parent=GSCOCT00016664001 | |
| 45734 chr10 manual_curation gene 16302250 16307445 . - . ID=GSCOCG00016665001;Name=Cc10_g11020 | |
| 45735 chr10 manual_curation mRNA 16302250 16307445 . - . ID=GSCOCT00016665001;Parent=GSCOCG00016665001;Name=Cc10_g11020 | |
| 45736 chr10 manual_curation polypeptide 16302250 16307272 . - . ID=GSCOCP00016665001;Dbxref=TrEMBL:B9RJ61,TrEMBL:G7K8W3,TrEMBL:I1MAK7;Derives_from=GSCOCT00016665001;Name=Cc10_g11020;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016665001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=complement(join(925990..926103%2C925751..925904%2C924528..924629%2C921081..921259));owner=coffea | |
| 45737 chr10 manual_curation exon 16302250 16302428 . - . Parent=GSCOCT00016665001 | |
| 45738 chr10 manual_curation exon 16305697 16305798 . - . Parent=GSCOCT00016665001 | |
| 45739 chr10 manual_curation exon 16306920 16307073 . - . Parent=GSCOCT00016665001 | |
| 45740 chr10 manual_curation exon 16307159 16307445 . - . Parent=GSCOCT00016665001 | |
| 45741 chr10 manual_curation CDS 16302250 16302428 . - 1 Parent=GSCOCT00016665001 | |
| 45742 chr10 manual_curation CDS 16305697 16305798 . - 1 Parent=GSCOCT00016665001 | |
| 45743 chr10 manual_curation CDS 16306920 16307073 . - 0 Parent=GSCOCT00016665001 | |
| 45744 chr10 manual_curation CDS 16307159 16307272 . - 0 Parent=GSCOCT00016665001 | |
| 45745 chr10 manual_curation gene 16313894 16322719 . - . ID=GSCOCG00016666001;Name=Cc10_g11030 | |
| 45746 chr10 manual_curation mRNA 16313894 16322719 . - . ID=GSCOCT00016666001;Parent=GSCOCG00016666001;Name=Cc10_g11030 | |
| 45747 chr10 manual_curation polypeptide 16314439 16322313 . - . ID=GSCOCP00016666001;Dbxref=InterPro:IPR001900,PFAM:PF00773,PROSITE:PS01175,SwissProt:Q0V9R3,SwissProt:Q8CI75,SwissProt:Q8IYB7,TAIR:AT1G77680.1,TAIR:AT2G17510.2,TAIR:AT5G02250.1,TrEMBL:B9RJ60,TrEMBL:F6H0T5,TrEMBL:I1MAK8;Derives_from=GSCOCT00016666001;Name=Cc10_g11030;Ontology_term=CC_evidence_code:ISS,GO:0003723,GO:0004540,CC_EC_number:3.1.13.1,PRODUCT:Putative DIS3-like CDSuclease 2,CC_functional_completeness:modules,CC_gene:dis3l2,CC_gene:DIS3L2,CC_gene:Dis3l2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016666001~ Putative DIS3-like CDSuclease 2~ dis3l2~ modules;original_location=complement(join(940997..941144%2C939898..940271%2C939756..939809%2C939581..939649%2C936751..938991%2C933783..933854%2C933270..933680));owner=coffea | |
| 45748 chr10 manual_curation exon 16313894 16314849 . - . Parent=GSCOCT00016666001 | |
| 45749 chr10 manual_curation exon 16314952 16315023 . - . Parent=GSCOCT00016666001 | |
| 45750 chr10 manual_curation exon 16317920 16320160 . - . Parent=GSCOCT00016666001 | |
| 45751 chr10 manual_curation exon 16320750 16320818 . - . Parent=GSCOCT00016666001 | |
| 45752 chr10 manual_curation exon 16320925 16320978 . - . Parent=GSCOCT00016666001 | |
| 45753 chr10 manual_curation exon 16321067 16321440 . - . Parent=GSCOCT00016666001 | |
| 45754 chr10 manual_curation exon 16322166 16322719 . - . Parent=GSCOCT00016666001 | |
| 45755 chr10 manual_curation CDS 16314439 16314849 . - 0 Parent=GSCOCT00016666001 | |
| 45756 chr10 manual_curation CDS 16314952 16315023 . - 0 Parent=GSCOCT00016666001 | |
| 45757 chr10 manual_curation CDS 16317920 16320160 . - 0 Parent=GSCOCT00016666001 | |
| 45758 chr10 manual_curation CDS 16320750 16320818 . - 0 Parent=GSCOCT00016666001 | |
| 45759 chr10 manual_curation CDS 16320925 16320978 . - 0 Parent=GSCOCT00016666001 | |
| 45760 chr10 manual_curation CDS 16321067 16321440 . - 1 Parent=GSCOCT00016666001 | |
| 45761 chr10 manual_curation CDS 16322166 16322313 . - 0 Parent=GSCOCT00016666001 | |
| 45762 chr10 manual_curation gene 16386854 16391004 . + . ID=GSCOCG00016670001;Name=Cc10_g11040 | |
| 45763 chr10 manual_curation mRNA 16386854 16391004 . + . ID=GSCOCT00016670001;Parent=GSCOCG00016670001;Name=Cc10_g11040 | |
| 45764 chr10 manual_curation polypeptide 16387597 16389300 . + . ID=GSCOCP00016670001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR000571,InterPro:IPR012677,PFAM:PF00076,PFAM:PF00642,PROFILE:PS50102,PROFILE:PS50103,SMART:SM00356,SMART:SM00360,SwissProt:B0BN49,SwissProt:Q10B98,SwissProt:Q9SD61,TAIR:AT3G47120.1,TAIR:AT5G19960.1,TAIR:AT5G50250.1,TrEMBL:A5BUK4,TrEMBL:F6GUS5,TrEMBL:I1JHC2;Derives_from=GSCOCT00016670001;Name=Cc10_g11040;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Zinc finger CCCH domain-containing protein 25,CC_functional_completeness:complete,CC_gene:At3g47120,CC_gene:Os03g0826400,CC_gene:Rbmx2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016670001~ Zinc finger CCCH domain-containing protein 25~ At3g47120~ complete;original_location=join(1006428..1006600%2C1006733..1006842%2C1006966..1007153%2C1007598..1008131);owner=coffea | |
| 45765 chr10 manual_curation exon 16386854 16386918 . + . Parent=GSCOCT00016670001 | |
| 45766 chr10 manual_curation exon 16390863 16391004 . + . Parent=GSCOCT00016670001 | |
| 45767 chr10 manual_curation exon 16387546 16387769 . + . Parent=GSCOCT00016670001 | |
| 45768 chr10 manual_curation exon 16387902 16388011 . + . Parent=GSCOCT00016670001 | |
| 45769 chr10 manual_curation exon 16388135 16388322 . + . Parent=GSCOCT00016670001 | |
| 45770 chr10 manual_curation exon 16388767 16389604 . + . Parent=GSCOCT00016670001 | |
| 45771 chr10 manual_curation CDS 16387597 16387769 . + 0 Parent=GSCOCT00016670001 | |
| 45772 chr10 manual_curation CDS 16387902 16388011 . + 2 Parent=GSCOCT00016670001 | |
| 45773 chr10 manual_curation CDS 16388135 16388322 . + 1 Parent=GSCOCT00016670001 | |
| 45774 chr10 manual_curation CDS 16388767 16389300 . + 0 Parent=GSCOCT00016670001 | |
| 45775 chr10 manual_curation gene 16391205 16392736 . - . ID=GSCOCG00016671001;Name=Cc10_g11050 | |
| 45776 chr10 manual_curation mRNA 16391205 16392736 . - . ID=GSCOCT00016671001;Parent=GSCOCG00016671001;Name=Cc10_g11050 | |
| 45777 chr10 manual_curation polypeptide 16391205 16392736 . - . ID=GSCOCP00016671001;Dbxref=InterPro:IPR007122,InterPro:IPR007123,PANTHER:PTHR11977,PFAM:PF00626,PRINTS:PR00597,SMART:SM00262,SwissProt:O65570,SwissProt:O81643,SwissProt:O81645,TAIR:AT2G29890.3,TAIR:AT4G30160.2,TAIR:AT5G57320.1,TrEMBL:A9PHE8,TrEMBL:B9SI12,TrEMBL:I1N029;Derives_from=GSCOCT00016671001;Name=Cc10_g11050;Ontology_term=CC_evidence_code:ISS,GO:0003779,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:VLN1,CC_gene:VLN4,CC_gene:VLN3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016671001~ Hypothetical protein~ VLN1~ missing_functional_completeness;original_location=complement(join(1011446..1011567%2C1010842..1011018%2C1010341..1010474%2C1010036..1010151));owner=coffea | |
| 45778 chr10 manual_curation exon 16391205 16391320 . - . Parent=GSCOCT00016671001 | |
| 45779 chr10 manual_curation exon 16391510 16391643 . - . Parent=GSCOCT00016671001 | |
| 45780 chr10 manual_curation exon 16392011 16392187 . - . Parent=GSCOCT00016671001 | |
| 45781 chr10 manual_curation exon 16392615 16392736 . - . Parent=GSCOCT00016671001 | |
| 45782 chr10 manual_curation CDS 16391205 16391320 . - 1 Parent=GSCOCT00016671001 | |
| 45783 chr10 manual_curation CDS 16391510 16391643 . - 2 Parent=GSCOCT00016671001 | |
| 45784 chr10 manual_curation CDS 16392011 16392187 . - 2 Parent=GSCOCT00016671001 | |
| 45785 chr10 manual_curation CDS 16392615 16392736 . - 0 Parent=GSCOCT00016671001 | |
| 45786 chr10 manual_curation gene 16396566 16397728 . + . ID=GSCOCG00016673001;Name=Cc10_g11060 | |
| 45787 chr10 manual_curation mRNA 16396566 16397728 . + . ID=GSCOCT00016673001;Parent=GSCOCG00016673001;Name=Cc10_g11060 | |
| 45788 chr10 manual_curation polypeptide 16396566 16397331 . + . ID=GSCOCP00016673001;Dbxref=TAIR:AT4G08230.1,TrEMBL:A9P8L7,TrEMBL:A9PDX9,TrEMBL:B9RJ57;Derives_from=GSCOCT00016673001;Name=Cc10_g11060;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:glycine-rich protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016673001~ glycine-rich protein~ unknown_gene~ complete;original_location=join(1015397..1015448%2C1015696..1015799%2C1015877..1016024%2C1016128..1016162);owner=coffea | |
| 45789 chr10 manual_curation exon 16396566 16396617 . + . Parent=GSCOCT00016673001 | |
| 45790 chr10 manual_curation exon 16396865 16396968 . + . Parent=GSCOCT00016673001 | |
| 45791 chr10 manual_curation exon 16397046 16397193 . + . Parent=GSCOCT00016673001 | |
| 45792 chr10 manual_curation exon 16397297 16397728 . + . Parent=GSCOCT00016673001 | |
| 45793 chr10 manual_curation CDS 16396566 16396617 . + 0 Parent=GSCOCT00016673001 | |
| 45794 chr10 manual_curation CDS 16396865 16396968 . + 1 Parent=GSCOCT00016673001 | |
| 45795 chr10 manual_curation CDS 16397046 16397193 . + 0 Parent=GSCOCT00016673001 | |
| 45796 chr10 manual_curation CDS 16397297 16397331 . + 1 Parent=GSCOCT00016673001 | |
| 45797 chr10 manual_curation gene 16407660 16411553 . + . ID=GSCOCG00016674001;Name=Cc10_g11070 | |
| 45798 chr10 manual_curation mRNA 16407660 16411553 . + . ID=GSCOCT00016674001;Parent=GSCOCG00016674001;Name=Cc10_g11070 | |
| 45799 chr10 manual_curation polypeptide 16407777 16411462 . + . ID=GSCOCP00016674001;Dbxref=InterPro:IPR005123,PFAM:PF03171,SwissProt:Q07512,SwissProt:Q41452,SwissProt:Q9M547,TAIR:AT5G08640.1,TAIR:AT5G63590.1,TAIR:AT5G63600.2,TrEMBL:F1SZA2,TrEMBL:Q1PHN5,TrEMBL:Q6BEG8;Derives_from=GSCOCT00016674001;Name=Cc10_g11070;Ontology_term=CC_evidence_code:ISS,GO:0016491,CC_EC_number:1.14.11.9,PRODUCT:Flavonol synthase/flavanone 3-hydroxylase,CC_functional_completeness:complete,CC_gene:FLS,CC_gene:FL;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016674001~ Flavonol synthase/flavanone 3-hydroxylase~ FLS~ complete;original_location=join(1026608..1027074%2C1029123..1029372%2C1030081..1030293);owner=coffea | |
| 45800 chr10 manual_curation exon 16407660 16408243 . + . Parent=GSCOCT00016674001 | |
| 45801 chr10 manual_curation exon 16410292 16410541 . + . Parent=GSCOCT00016674001 | |
| 45802 chr10 manual_curation exon 16411250 16411553 . + . Parent=GSCOCT00016674001 | |
| 45803 chr10 manual_curation CDS 16407777 16408243 . + 0 Parent=GSCOCT00016674001 | |
| 45804 chr10 manual_curation CDS 16410292 16410541 . + 2 Parent=GSCOCT00016674001 | |
| 45805 chr10 manual_curation CDS 16411250 16411462 . + 0 Parent=GSCOCT00016674001 | |
| 45806 chr10 manual_curation gene 16430529 16432135 . + . ID=GSCOCG00016676001;Name=Cc10_g11080 | |
| 45807 chr10 manual_curation mRNA 16430529 16432135 . + . ID=GSCOCT00016676001;Parent=GSCOCG00016676001;Name=Cc10_g11080 | |
| 45808 chr10 manual_curation polypeptide 16430529 16431716 . + . ID=GSCOCP00016676001;Dbxref=InterPro:IPR001810,InterPro:IPR022364,PROFILE:PS50181,SUPERFAMILY:SSF81383,SwissProt:Q1PFK0,SwissProt:Q8L7H1,SwissProt:Q94B46,TAIR:AT1G55660.1,TAIR:AT4G14096.1,TAIR:AT4G14103.2,TrEMBL:B9N7R5,TrEMBL:B9N7R6,TrEMBL:B9N7R7;Derives_from=GSCOCT00016676001;Name=Cc10_g11080;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative F-box/LRR-repeat protein At4g14103,CC_functional_completeness:complete,CC_gene:At4g14103,CC_gene:At1g55660,CC_gene:At4g14096;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016676001~ Putative F-box/LRR-repeat protein At4g14103~ At4g14103~ complete;original_location=1049360..1050547;owner=coffea | |
| 45809 chr10 manual_curation exon 16430529 16432135 . + . Parent=GSCOCT00016676001 | |
| 45810 chr10 manual_curation CDS 16430529 16431716 . + 0 Parent=GSCOCT00016676001 | |
| 45811 chr10 manual_curation gene 16433947 16434373 . + . ID=GSCOCG00016677001;Name=Cc10_g11090 | |
| 45812 chr10 manual_curation mRNA 16433947 16434373 . + . ID=GSCOCT00016677001;Parent=GSCOCG00016677001;Name=Cc10_g11090 | |
| 45813 chr10 manual_curation polypeptide 16434137 16434316 . + . ID=GSCOCP00016677001;Derives_from=GSCOCT00016677001;Name=Cc10_g11090;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016677001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1052968..1053147;owner=coffea | |
| 45814 chr10 manual_curation exon 16433947 16434373 . + . Parent=GSCOCT00016677001 | |
| 45815 chr10 manual_curation CDS 16434137 16434316 . + 0 Parent=GSCOCT00016677001 | |
| 45816 chr10 manual_curation gene 16538607 16542419 . - . ID=GSCOCG00016679001;Name=Cc10_g11100 | |
| 45817 chr10 manual_curation mRNA 16538607 16542419 . - . ID=GSCOCT00016679001;Parent=GSCOCG00016679001;Name=Cc10_g11100 | |
| 45818 chr10 manual_curation polypeptide 16538607 16542419 . - . ID=GSCOCP00016679001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002402,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00464,SUPERFAMILY:SSF48264,SwissProt:O48786,SwissProt:Q05047,SwissProt:Q9SHG5,TAIR:AT3G14620.1,TAIR:AT3G14640.1,TAIR:AT3G14690.1,TrEMBL:D7STX0,TrEMBL:F6HRJ3,TrEMBL:F6HRJ4;Derives_from=GSCOCT00016679001;Name=Cc10_g11100;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.3.3.9,PRODUCT:Putative Cytochrome P450,CC_functional_completeness:complete,CC_gene:CYP734A1,CC_gene:CYP72A1,CC_gene:CYP72C1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016679001~ Putative Cytochrome P450~ CYP734A1~ complete;original_location=complement(join(1161055..1161250%2C1158373..1158449%2C1157791..1158001%2C1157438..1157541));owner=coffea | |
| 45819 chr10 manual_curation exon 16538607 16538710 . - . Parent=GSCOCT00016679001 | |
| 45820 chr10 manual_curation exon 16538960 16539170 . - . Parent=GSCOCT00016679001 | |
| 45821 chr10 manual_curation exon 16539542 16539618 . - . Parent=GSCOCT00016679001 | |
| 45822 chr10 manual_curation exon 16542224 16542419 . - . Parent=GSCOCT00016679001 | |
| 45823 chr10 manual_curation CDS 16538607 16538710 . - 1 Parent=GSCOCT00016679001 | |
| 45824 chr10 manual_curation CDS 16538960 16539170 . - 0 Parent=GSCOCT00016679001 | |
| 45825 chr10 manual_curation CDS 16539542 16539618 . - 1 Parent=GSCOCT00016679001 | |
| 45826 chr10 manual_curation CDS 16542224 16542419 . - 0 Parent=GSCOCT00016679001 | |
| 45827 chr10 manual_curation gene 16585708 16588515 . + . ID=GSCOCG00016684001;Name=Cc10_g11110 | |
| 45828 chr10 manual_curation mRNA 16585708 16588515 . + . ID=GSCOCT00016684001;Parent=GSCOCG00016684001;Name=Cc10_g11110 | |
| 45829 chr10 manual_curation polypeptide 16586547 16587173 . + . ID=GSCOCP00016684001;Dbxref=InterPro:IPR003480,PFAM:PF02458,SwissProt:Q70PR7,SwissProt:Q9FI40,SwissProt:Q9ZTK5,TAIR:AT1G24420.1,TAIR:AT1G24430.1,TAIR:AT3G26040.1,TrEMBL:B9GQ16,TrEMBL:B9R8I4,TrEMBL:F6H0C6;Derives_from=GSCOCT00016684001;Name=Cc10_g11110;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.3.1.150,PRODUCT:Putative Vinorine synthase,CC_functional_completeness:fragment,CC_gene:ACT,CC_gene:BAHD1,CC_gene:DAT;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016684001~ Putative Vinorine synthase~ ACT~ fragment;original_location=1205378..1206004;owner=coffea | |
| 45830 chr10 manual_curation exon 16585708 16588515 . + . Parent=GSCOCT00016684001 | |
| 45831 chr10 manual_curation CDS 16586547 16587173 . + 0 Parent=GSCOCT00016684001 | |
| 45832 chr10 manual_curation gene 16588630 16592701 . - . ID=GSCOCG00016685001;Name=Cc10_g11120 | |
| 45833 chr10 manual_curation mRNA 16588630 16592701 . - . ID=GSCOCT00016685001;Parent=GSCOCG00016685001;Name=Cc10_g11120 | |
| 45834 chr10 manual_curation polypeptide 16588630 16592274 . - . ID=GSCOCP00016685001;Dbxref=InterPro:IPR013057,PFAM:PF01490,SwissProt:Q8L883,SwissProt:Q9S836,TAIR:AT2G21050.1,TAIR:AT2G38120.1,TrEMBL:A9PE49,TrEMBL:B9GUE3;Derives_from=GSCOCT00016685001;Name=Cc10_g11120;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Auxin transporter-like protein 5,CC_functional_completeness:complete,CC_gene:LAX3,CC_gene:LAX5,CC_gene:LAX2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00016685001~ Auxin transporter-like protein 5~ LAX3~ complete;original_location=complement(join(1210968..1211105%2C1210671..1210783%2C1210407..1210590%2C1210146..1210243%2C1209001..1209208%2C1208198..1208455%2C1207461..1207655));owner=coffea | |
| 45835 chr10 manual_curation exon 16588630 16588824 . - . Parent=GSCOCT00016685001 | |
| 45836 chr10 manual_curation exon 16589367 16589624 . - . Parent=GSCOCT00016685001 | |
| 45837 chr10 manual_curation exon 16590170 16590377 . - . Parent=GSCOCT00016685001 | |
| 45838 chr10 manual_curation exon 16591315 16591412 . - . Parent=GSCOCT00016685001 | |
| 45839 chr10 manual_curation exon 16591576 16591759 . - . Parent=GSCOCT00016685001 | |
| 45840 chr10 manual_curation exon 16591840 16591952 . - . Parent=GSCOCT00016685001 | |
| 45841 chr10 manual_curation exon 16592137 16592701 . - . Parent=GSCOCT00016685001 | |
| 45842 chr10 manual_curation CDS 16588630 16588824 . - 0 Parent=GSCOCT00016685001 | |
| 45843 chr10 manual_curation CDS 16589367 16589624 . - 0 Parent=GSCOCT00016685001 | |
| 45844 chr10 manual_curation CDS 16590170 16590377 . - 2 Parent=GSCOCT00016685001 | |
| 45845 chr10 manual_curation CDS 16591315 16591412 . - 0 Parent=GSCOCT00016685001 | |
| 45846 chr10 manual_curation CDS 16591576 16591759 . - 2 Parent=GSCOCT00016685001 | |
| 45847 chr10 manual_curation CDS 16591840 16591952 . - 0 Parent=GSCOCT00016685001 | |
| 45848 chr10 manual_curation CDS 16592137 16592274 . - 0 Parent=GSCOCT00016685001 | |
| 45849 chr10 manual_curation gene 16803415 16804544 . + . ID=GSCOCG00007951001;Name=Cc10_g11130 | |
| 45850 chr10 manual_curation mRNA 16803415 16804544 . + . ID=GSCOCT00007951001;Parent=GSCOCG00007951001;Name=Cc10_g11130 | |
| 45851 chr10 manual_curation polypeptide 16804353 16804544 . + . ID=GSCOCP00007951001;Derives_from=GSCOCT00007951001;Name=Cc10_g11130;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00007951001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=201623..201814;owner=coffea | |
| 45852 chr10 manual_curation exon 16803415 16804544 . + . Parent=GSCOCT00007951001 | |
| 45853 chr10 manual_curation CDS 16804353 16804544 . + 0 Parent=GSCOCT00007951001 | |
| 45854 chr10 manual_curation gene 16986251 16991720 . - . ID=GSCOCG00007954001;Name=Cc10_g11140 | |
| 45855 chr10 manual_curation mRNA 16986251 16991720 . - . ID=GSCOCT00007954001;Parent=GSCOCG00007954001;Name=Cc10_g11140 | |
| 45856 chr10 manual_curation polypeptide 16986588 16991589 . - . ID=GSCOCP00007954001;Dbxref=SwissProt:Q4V7N7,SwissProt:Q5F410,SwissProt:Q641M3,TAIR:AT1G34350.2,TrEMBL:C6SX47,TrEMBL:C6T4J9,TrEMBL:I1JD82;Derives_from=GSCOCT00007954001;Name=Cc10_g11140;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Transmembrane protein 18,CC_functional_completeness:modules,CC_gene:tmem18,CC_gene:TMEM18;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00007954001~ Putative Transmembrane protein 18~ tmem18~ modules;original_location=complement(join(388719..388859%2C386867..386972%2C384038..384186%2C383858..383953));owner=coffea | |
| 45857 chr10 manual_curation exon 16986251 16986683 . - . Parent=GSCOCT00007954001 | |
| 45858 chr10 manual_curation exon 16986768 16986916 . - . Parent=GSCOCT00007954001 | |
| 45859 chr10 manual_curation exon 16989597 16989702 . - . Parent=GSCOCT00007954001 | |
| 45860 chr10 manual_curation exon 16991449 16991720 . - . Parent=GSCOCT00007954001 | |
| 45861 chr10 manual_curation CDS 16986588 16986683 . - 0 Parent=GSCOCT00007954001 | |
| 45862 chr10 manual_curation CDS 16986768 16986916 . - 1 Parent=GSCOCT00007954001 | |
| 45863 chr10 manual_curation CDS 16989597 16989702 . - 0 Parent=GSCOCT00007954001 | |
| 45864 chr10 manual_curation CDS 16991449 16991589 . - 0 Parent=GSCOCT00007954001 | |
| 45865 chr10 manual_curation gene 17126683 17131877 . + . ID=GSCOCG00018441001;Name=Cc10_g11150 | |
| 45866 chr10 manual_curation mRNA 17126683 17131877 . + . ID=GSCOCT00018441001;Parent=GSCOCG00018441001;Name=Cc10_g11150 | |
| 45867 chr10 manual_curation polypeptide 17127390 17131410 . + . ID=GSCOCP00018441001;Dbxref=InterPro:IPR001023,InterPro:IPR013126,InterPro:IPR018181,PANTHER:PTHR19375,PFAM:PF00012,PRINTS:PR00301,PROSITE:PS00329,PROSITE:PS01036,SwissProt:P22358,SwissProt:P29215,SwissProt:P50021,SwissProt:Q02028,SwissProt:Q8YW74,SwissProt:Q9LTX9,TAIR:AT5G09590.1,TAIR:AT5G49910.1,TrEMBL:Q1SKX2;Derives_from=GSCOCT00018441001;Name=Cc10_g11150;Ontology_term=CC_evidence_code:ISS,GO:0005524,CC_EC_number:missing_EC_number,PRODUCT:Stromal 70 kDa heat shock-related protein%2C chloroplastic,CC_functional_completeness:complete,CC_gene:HSP70,CC_gene:HSP70-7,CC_gene:CHSP70,CC_gene:HSP70-6,CC_gene:dnaK2,CC_gene:dnaK;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018441001~ Stromal 70 kDa heat shock-related protein%2C chloroplastic~ HSP70~ complete;original_location=join(31862..31987%2C32979..33231%2C33988..34067%2C34152..34294%2C34372..34470%2C34627..34816%2C34932..35330%2C35478..35882);owner=coffea | |
| 45868 chr10 manual_curation exon 17126683 17127515 . + . Parent=GSCOCT00018441001 | |
| 45869 chr10 manual_curation exon 17128507 17128759 . + . Parent=GSCOCT00018441001 | |
| 45870 chr10 manual_curation exon 17129516 17129595 . + . Parent=GSCOCT00018441001 | |
| 45871 chr10 manual_curation exon 17129680 17129822 . + . Parent=GSCOCT00018441001 | |
| 45872 chr10 manual_curation exon 17129900 17129998 . + . Parent=GSCOCT00018441001 | |
| 45873 chr10 manual_curation exon 17130155 17130344 . + . Parent=GSCOCT00018441001 | |
| 45874 chr10 manual_curation exon 17130460 17130858 . + . Parent=GSCOCT00018441001 | |
| 45875 chr10 manual_curation exon 17131006 17131877 . + . Parent=GSCOCT00018441001 | |
| 45876 chr10 manual_curation CDS 17127390 17127515 . + 0 Parent=GSCOCT00018441001 | |
| 45877 chr10 manual_curation CDS 17128507 17128759 . + 0 Parent=GSCOCT00018441001 | |
| 45878 chr10 manual_curation CDS 17129516 17129595 . + 1 Parent=GSCOCT00018441001 | |
| 45879 chr10 manual_curation CDS 17129680 17129822 . + 0 Parent=GSCOCT00018441001 | |
| 45880 chr10 manual_curation CDS 17129900 17129998 . + 2 Parent=GSCOCT00018441001 | |
| 45881 chr10 manual_curation CDS 17130155 17130344 . + 2 Parent=GSCOCT00018441001 | |
| 45882 chr10 manual_curation CDS 17130460 17130858 . + 0 Parent=GSCOCT00018441001 | |
| 45883 chr10 manual_curation CDS 17131006 17131410 . + 0 Parent=GSCOCT00018441001 | |
| 45884 chr10 manual_curation gene 17135800 17147692 . - . ID=GSCOCG00018443001;Name=Cc10_g11160 | |
| 45885 chr10 manual_curation mRNA 17135800 17147692 . - . ID=GSCOCT00018443001;Parent=GSCOCG00018443001;Name=Cc10_g11160 | |
| 45886 chr10 manual_curation polypeptide 17136157 17147654 . - . ID=GSCOCP00018443001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR006139,InterPro:IPR006140,InterPro:IPR016040,PFAM:PF00389,PFAM:PF02826,PROSITE:PS00671,SwissProt:B6YWH0,SwissProt:O29445,SwissProt:P35136,TAIR:AT1G17745.2,TAIR:AT1G72190.1,TAIR:AT4G34200.1,TrEMBL:A9PI34,TrEMBL:B9MWF6,TrEMBL:B9S702;Derives_from=GSCOCT00018443001;Name=Cc10_g11160;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,GO:0048037,GO:0051287,CC_EC_number:1.1.1.95,PRODUCT:Putative Glyoxylate reductase,CC_functional_completeness:modules,CC_gene:serA,CC_gene:gyaR;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018443001~ Putative Glyoxylate reductase~ serA~ modules;original_location=complement(join(51970..52126%2C50481..50614%2C49348..49492%2C49119..49246%2C48065..48136%2C46371..46497%2C46165..46289%2C45866..45907%2C42423..42635%2C40629..40697));owner=coffea | |
| 45887 chr10 manual_curation exon 17135800 17136225 . - . Parent=GSCOCT00018443001 | |
| 45888 chr10 manual_curation exon 17137951 17138163 . - . Parent=GSCOCT00018443001 | |
| 45889 chr10 manual_curation exon 17141394 17141435 . - . Parent=GSCOCT00018443001 | |
| 45890 chr10 manual_curation exon 17141693 17141817 . - . Parent=GSCOCT00018443001 | |
| 45891 chr10 manual_curation exon 17141899 17142025 . - . Parent=GSCOCT00018443001 | |
| 45892 chr10 manual_curation exon 17143593 17143664 . - . Parent=GSCOCT00018443001 | |
| 45893 chr10 manual_curation exon 17144647 17144774 . - . Parent=GSCOCT00018443001 | |
| 45894 chr10 manual_curation exon 17144876 17145020 . - . Parent=GSCOCT00018443001 | |
| 45895 chr10 manual_curation exon 17146009 17146142 . - . Parent=GSCOCT00018443001 | |
| 45896 chr10 manual_curation exon 17147498 17147692 . - . Parent=GSCOCT00018443001 | |
| 45897 chr10 manual_curation CDS 17136157 17136225 . - 0 Parent=GSCOCT00018443001 | |
| 45898 chr10 manual_curation CDS 17137951 17138163 . - 0 Parent=GSCOCT00018443001 | |
| 45899 chr10 manual_curation CDS 17141394 17141435 . - 0 Parent=GSCOCT00018443001 | |
| 45900 chr10 manual_curation CDS 17141693 17141817 . - 1 Parent=GSCOCT00018443001 | |
| 45901 chr10 manual_curation CDS 17141899 17142025 . - 0 Parent=GSCOCT00018443001 | |
| 45902 chr10 manual_curation CDS 17143593 17143664 . - 0 Parent=GSCOCT00018443001 | |
| 45903 chr10 manual_curation CDS 17144647 17144774 . - 1 Parent=GSCOCT00018443001 | |
| 45904 chr10 manual_curation CDS 17144876 17145020 . - 0 Parent=GSCOCT00018443001 | |
| 45905 chr10 manual_curation CDS 17146009 17146142 . - 1 Parent=GSCOCT00018443001 | |
| 45906 chr10 manual_curation CDS 17147498 17147654 . - 0 Parent=GSCOCT00018443001 | |
| 45907 chr10 manual_curation gene 17278030 17281104 . - . ID=GSCOCG00018460001;Name=Cc10_g11170 | |
| 45908 chr10 manual_curation mRNA 17278030 17281104 . - . ID=GSCOCT00018460001;Parent=GSCOCG00018460001;Name=Cc10_g11170 | |
| 45909 chr10 manual_curation polypeptide 17279225 17281104 . - . ID=GSCOCP00018460001;Dbxref=InterPro:IPR019557,PFAM:PF10536,SwissProt:Q9LNG5,TAIR:AT1G48120.1,TrEMBL:A5B3Q0,TrEMBL:F6I0E8,TrEMBL:Q4W6T5;Derives_from=GSCOCT00018460001;Name=Cc10_g11170;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:At1g48120;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018460001~ Hypothetical protein~ At1g48120~ missing_functional_completeness;original_location=complement(join(185430..185576%2C184513..184743%2C183697..183792));owner=coffea | |
| 45910 chr10 manual_curation exon 17278030 17279320 . - . Parent=GSCOCT00018460001 | |
| 45911 chr10 manual_curation exon 17280041 17280271 . - . Parent=GSCOCT00018460001 | |
| 45912 chr10 manual_curation exon 17280958 17281104 . - . Parent=GSCOCT00018460001 | |
| 45913 chr10 manual_curation CDS 17279225 17279320 . - 0 Parent=GSCOCT00018460001 | |
| 45914 chr10 manual_curation CDS 17280041 17280271 . - 0 Parent=GSCOCT00018460001 | |
| 45915 chr10 manual_curation CDS 17280958 17281104 . - 0 Parent=GSCOCT00018460001 | |
| 45916 chr10 manual_curation gene 17295533 17296523 . + . ID=GSCOCG00018463001;Name=Cc10_g11180 | |
| 45917 chr10 manual_curation mRNA 17295533 17296523 . + . ID=GSCOCT00018463001;Parent=GSCOCG00018463001;Name=Cc10_g11180 | |
| 45918 chr10 manual_curation polypeptide 17296183 17296454 . + . ID=GSCOCP00018463001;Dbxref=TrEMBL:B9S703;Derives_from=GSCOCT00018463001;Name=Cc10_g11180;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018463001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=join(200655..200820%2C200907..200926);owner=coffea | |
| 45919 chr10 manual_curation exon 17295533 17296348 . + . Parent=GSCOCT00018463001 | |
| 45920 chr10 manual_curation exon 17296435 17296523 . + . Parent=GSCOCT00018463001 | |
| 45921 chr10 manual_curation CDS 17296183 17296348 . + 0 Parent=GSCOCT00018463001 | |
| 45922 chr10 manual_curation CDS 17296435 17296454 . + 1 Parent=GSCOCT00018463001 | |
| 45923 chr10 manual_curation gene 17296604 17297274 . + . ID=GSCOCG00018464001;Name=Cc10_g11190 | |
| 45924 chr10 manual_curation mRNA 17296604 17297274 . + . ID=GSCOCT00018464001;Parent=GSCOCG00018464001;Name=Cc10_g11190 | |
| 45925 chr10 manual_curation polypeptide 17296604 17297005 . + . ID=GSCOCP00018464001;Dbxref=TrEMBL:B9MWF7,TrEMBL:B9S703,TrEMBL:F6I459;Derives_from=GSCOCT00018464001;Name=Cc10_g11190;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018464001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=201076..201477;owner=coffea | |
| 45926 chr10 manual_curation exon 17296604 17297274 . + . Parent=GSCOCT00018464001 | |
| 45927 chr10 manual_curation CDS 17296604 17297005 . + 0 Parent=GSCOCT00018464001 | |
| 45928 chr10 manual_curation gene 17300921 17302282 . - . ID=GSCOCG00018465001;Name=Cc10_g11200 | |
| 45929 chr10 manual_curation mRNA 17300921 17302282 . - . ID=GSCOCT00018465001;Parent=GSCOCG00018465001;Name=Cc10_g11200 | |
| 45930 chr10 manual_curation polypeptide 17301110 17302282 . - . ID=GSCOCP00018465001;Derives_from=GSCOCT00018465001;Name=Cc10_g11200;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018465001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(206724..206754%2C206548..206639%2C206120..206200%2C205582..205938));owner=coffea | |
| 45931 chr10 manual_curation exon 17300921 17301466 . - . Parent=GSCOCT00018465001 | |
| 45932 chr10 manual_curation exon 17301648 17301728 . - . Parent=GSCOCT00018465001 | |
| 45933 chr10 manual_curation exon 17302076 17302167 . - . Parent=GSCOCT00018465001 | |
| 45934 chr10 manual_curation exon 17302252 17302282 . - . Parent=GSCOCT00018465001 | |
| 45935 chr10 manual_curation CDS 17301110 17301466 . - 0 Parent=GSCOCT00018465001 | |
| 45936 chr10 manual_curation CDS 17301648 17301728 . - 0 Parent=GSCOCT00018465001 | |
| 45937 chr10 manual_curation CDS 17302076 17302167 . - 1 Parent=GSCOCT00018465001 | |
| 45938 chr10 manual_curation CDS 17302252 17302282 . - 0 Parent=GSCOCT00018465001 | |
| 45939 chr10 manual_curation gene 17314383 17320435 . + . ID=GSCOCG00018466001;Name=Cc10_g11210 | |
| 45940 chr10 manual_curation mRNA 17314383 17320435 . + . ID=GSCOCT00018466001;Parent=GSCOCG00018466001;Name=Cc10_g11210 | |
| 45941 chr10 manual_curation polypeptide 17318817 17320064 . + . ID=GSCOCP00018466001;Dbxref=InterPro:IPR001810,InterPro:IPR017451,InterPro:IPR022364,PFAM:PF00646,PROFILE:PS50181,SMART:SM00256,SUPERFAMILY:SSF81383,TIGRFAMs:TIGR01640,TrEMBL:B9MWF7,TrEMBL:B9S703,TrEMBL:F6I459;Derives_from=GSCOCT00018466001;Name=Cc10_g11210;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018466001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=223289..224536;owner=coffea | |
| 45942 chr10 manual_curation exon 17314383 17314668 . + . Parent=GSCOCT00018466001 | |
| 45943 chr10 manual_curation exon 17318776 17320435 . + . Parent=GSCOCT00018466001 | |
| 45944 chr10 manual_curation CDS 17318817 17320064 . + 0 Parent=GSCOCT00018466001 | |
| 45945 chr10 manual_curation gene 17344016 17346237 . + . ID=GSCOCG00018468001;Name=Cc10_g11220 | |
| 45946 chr10 manual_curation mRNA 17344016 17346237 . + . ID=GSCOCT00018468001;Parent=GSCOCG00018468001;Name=Cc10_g11220 | |
| 45947 chr10 manual_curation polypeptide 17344139 17345696 . + . ID=GSCOCP00018468001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,PROSITE:PS00375,SwissProt:Q9LMF1,SwissProt:Q9SK82,SwissProt:Q9ZWJ3,TAIR:AT1G22360.1,TAIR:AT1G22380.1,TAIR:AT1G22400.1,TrEMBL:B9HDE8,TrEMBL:B9HDE9,TrEMBL:B9IHE1;Derives_from=GSCOCT00018468001;Name=Cc10_g11220;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:UDP-glycosyltransferase 85A1,CC_functional_completeness:complete,CC_gene:UGT85A1,CC_gene:UGT85A3,CC_gene:UGT85A2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018468001~ UDP-glycosyltransferase 85A1~ UGT85A1~ complete;original_location=join(248611..249118%2C249234..250168);owner=coffea | |
| 45948 chr10 manual_curation exon 17344016 17344646 . + . Parent=GSCOCT00018468001 | |
| 45949 chr10 manual_curation exon 17344762 17346237 . + . Parent=GSCOCT00018468001 | |
| 45950 chr10 manual_curation CDS 17344139 17344646 . + 0 Parent=GSCOCT00018468001 | |
| 45951 chr10 manual_curation CDS 17344762 17345696 . + 1 Parent=GSCOCT00018468001 | |
| 45952 chr10 manual_curation gene 17367481 17372566 . - . ID=GSCOCG00018469001;Name=Cc10_g11230 | |
| 45953 chr10 manual_curation mRNA 17367481 17372566 . - . ID=GSCOCT00018469001;Parent=GSCOCG00018469001;Name=Cc10_g11230 | |
| 45954 chr10 manual_curation polypeptide 17367981 17372401 . - . ID=GSCOCP00018469001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q60CZ8,SwissProt:Q6L438,SwissProt:Q8W1E0,TAIR:AT5G35450.1,TAIR:AT5G43470.1,TAIR:AT5G48620.1,TrEMBL:A0FD16,TrEMBL:A0FD19,TrEMBL:A1X877;Derives_from=GSCOCT00018469001;Name=Cc10_g11230;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative Disease resistance protein (CC-NBS-LRR class) family,CC_functional_completeness:complete,CC_gene:R1A-6,CC_gene:R1A-10,CC_gene:R1A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018469001~ Putative Disease resistance protein (CC-NBS-LRR class) family~ R1A-6~ complete;original_location=complement(join(276412..276873%2C272926..275066%2C272808..272821%2C272661..272718%2C272453..272507));owner=coffea | |
| 45955 chr10 manual_curation exon 17367481 17368035 . - . Parent=GSCOCT00018469001 | |
| 45956 chr10 manual_curation exon 17368189 17368246 . - . Parent=GSCOCT00018469001 | |
| 45957 chr10 manual_curation exon 17368336 17368349 . - . Parent=GSCOCT00018469001 | |
| 45958 chr10 manual_curation exon 17368454 17370594 . - . Parent=GSCOCT00018469001 | |
| 45959 chr10 manual_curation exon 17371940 17372566 . - . Parent=GSCOCT00018469001 | |
| 45960 chr10 manual_curation CDS 17367981 17368035 . - 2 Parent=GSCOCT00018469001 | |
| 45961 chr10 manual_curation CDS 17368189 17368246 . - 1 Parent=GSCOCT00018469001 | |
| 45962 chr10 manual_curation CDS 17368336 17368349 . - 2 Parent=GSCOCT00018469001 | |
| 45963 chr10 manual_curation CDS 17368454 17370594 . - 0 Parent=GSCOCT00018469001 | |
| 45964 chr10 manual_curation CDS 17371940 17372401 . - 0 Parent=GSCOCT00018469001 | |
| 45965 chr10 manual_curation gene 17532801 17536901 . + . ID=GSCOCG00018471001;Name=Cc10_g11240 | |
| 45966 chr10 manual_curation mRNA 17532801 17536901 . + . ID=GSCOCT00018471001;Parent=GSCOCG00018471001;Name=Cc10_g11240 | |
| 45967 chr10 manual_curation polypeptide 17532801 17536901 . + . ID=GSCOCP00018471001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR008030,InterPro:IPR016040,PFAM:PF05368,SwissProt:P52577,SwissProt:Q15GI3,SwissProt:Q15GI4,TAIR:AT1G32100.1,TAIR:AT1G75280.1,TAIR:AT1G75290.1,TrEMBL:F6HBM2,TrEMBL:F6HBM5,TrEMBL:Q3KN71;Derives_from=GSCOCT00018471001;Name=Cc10_g11240;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,CC_EC_number:1.3.1.45,PRODUCT:Eugenol synthase 1,CC_functional_completeness:complete,CC_gene:EGS1,CC_gene:IGS1,CC_gene:At1g75280;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018471001~ Eugenol synthase 1~ EGS1~ complete;original_location=join(437273..437449%2C438582..438716%2C439138..439369%2C440723..440915%2C441026..441074%2C441230..441373);owner=coffea | |
| 45968 chr10 manual_curation exon 17532801 17532977 . + . Parent=GSCOCT00018471001 | |
| 45969 chr10 manual_curation exon 17534110 17534244 . + . Parent=GSCOCT00018471001 | |
| 45970 chr10 manual_curation exon 17534666 17534897 . + . Parent=GSCOCT00018471001 | |
| 45971 chr10 manual_curation exon 17536251 17536443 . + . Parent=GSCOCT00018471001 | |
| 45972 chr10 manual_curation exon 17536554 17536602 . + . Parent=GSCOCT00018471001 | |
| 45973 chr10 manual_curation exon 17536758 17536901 . + . Parent=GSCOCT00018471001 | |
| 45974 chr10 manual_curation CDS 17532801 17532977 . + 0 Parent=GSCOCT00018471001 | |
| 45975 chr10 manual_curation CDS 17534110 17534244 . + 0 Parent=GSCOCT00018471001 | |
| 45976 chr10 manual_curation CDS 17534666 17534897 . + 0 Parent=GSCOCT00018471001 | |
| 45977 chr10 manual_curation CDS 17536251 17536443 . + 1 Parent=GSCOCT00018471001 | |
| 45978 chr10 manual_curation CDS 17536554 17536602 . + 2 Parent=GSCOCT00018471001 | |
| 45979 chr10 manual_curation CDS 17536758 17536901 . + 0 Parent=GSCOCT00018471001 | |
| 45980 chr10 manual_curation gene 17723478 17725517 . + . ID=GSCOCG00018474001;Name=Cc10_g11250 | |
| 45981 chr10 manual_curation mRNA 17723478 17725517 . + . ID=GSCOCT00018474001;Parent=GSCOCG00018474001;Name=Cc10_g11250 | |
| 45982 chr10 manual_curation polypeptide 17723478 17725517 . + . ID=GSCOCP00018474001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q60CZ8,SwissProt:Q6L438,SwissProt:Q8W1E0,TAIR:AT3G46530.1,TAIR:AT5G35450.1,TAIR:AT5G43470.1,TrEMBL:A0FD16,TrEMBL:A0FD19,TrEMBL:A1X877;Derives_from=GSCOCT00018474001;Name=Cc10_g11250;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1A-6,CC_functional_completeness:fragment,CC_gene:R1A-6,CC_gene:R1A-10,CC_gene:R1A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018474001~ Putative late blight resistance protein homolog R1A-6~ R1A-6~ fragment;original_location=627950..629989;owner=coffea | |
| 45983 chr10 manual_curation exon 17723478 17725517 . + . Parent=GSCOCT00018474001 | |
| 45984 chr10 manual_curation CDS 17723478 17725517 . + 0 Parent=GSCOCT00018474001 | |
| 45985 chr10 manual_curation gene 17781814 17783856 . - . ID=GSCOCG00018478001;Name=Cc10_g11260 | |
| 45986 chr10 manual_curation mRNA 17781814 17783856 . - . ID=GSCOCT00018478001;Parent=GSCOCG00018478001;Name=Cc10_g11260 | |
| 45987 chr10 manual_curation polypeptide 17781814 17783856 . - . ID=GSCOCP00018478001;Dbxref=InterPro:IPR008030,PFAM:PF05368,SwissProt:P52580,SwissProt:Q15GI3,SwissProt:Q15GI4,TAIR:AT1G75280.1,TAIR:AT1G75290.1,TAIR:AT1G75300.1,TrEMBL:B9P5B8,TrEMBL:F6HBM5,TrEMBL:Q3KN71;Derives_from=GSCOCT00018478001;Name=Cc10_g11260;Ontology_term=CC_evidence_code:ISS,CC_EC_number:1.3.1.45,PRODUCT:Eugenol synthase 1,CC_functional_completeness:fragment,CC_gene:EGS1,CC_gene:IGS1,CC_gene:IRL;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018478001~ Eugenol synthase 1~ EGS1~ fragment;original_location=complement(join(688167..688328%2C686895..687029%2C686286..686471));owner=coffea | |
| 45988 chr10 manual_curation exon 17781814 17781999 . - . Parent=GSCOCT00018478001 | |
| 45989 chr10 manual_curation exon 17782423 17782557 . - . Parent=GSCOCT00018478001 | |
| 45990 chr10 manual_curation exon 17783695 17783856 . - . Parent=GSCOCT00018478001 | |
| 45991 chr10 manual_curation CDS 17781814 17781999 . - 0 Parent=GSCOCT00018478001 | |
| 45992 chr10 manual_curation CDS 17782423 17782557 . - 0 Parent=GSCOCT00018478001 | |
| 45993 chr10 manual_curation CDS 17783695 17783856 . - 0 Parent=GSCOCT00018478001 | |
| 45994 chr10 manual_curation gene 17790341 17796252 . - . ID=GSCOCG00018481001;Name=Cc10_g11270 | |
| 45995 chr10 manual_curation mRNA 17790341 17796252 . - . ID=GSCOCT00018481001;Parent=GSCOCG00018481001;Name=Cc10_g11270 | |
| 45996 chr10 manual_curation polypeptide 17790341 17795837 . - . ID=GSCOCP00018481001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q60CZ8,SwissProt:Q6L438,SwissProt:Q8W1E0,TAIR:AT3G46530.1,TAIR:AT3G46710.1,TAIR:AT3G46730.1,TrEMBL:A0FD16,TrEMBL:A0FD19,TrEMBL:A1X877;Derives_from=GSCOCT00018481001;Name=Cc10_g11270;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1A-6,CC_functional_completeness:fragment,CC_gene:R1A-6,CC_gene:R1A-10,CC_gene:R1A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018481001~ Putative late blight resistance protein homolog R1A-6~ R1A-6~ fragment;original_location=complement(join(700064..700309%2C696455..696529%2C694998..696418%2C694813..694855));owner=coffea | |
| 45997 chr10 manual_curation exon 17790341 17790383 . - . Parent=GSCOCT00018481001 | |
| 45998 chr10 manual_curation exon 17790526 17791946 . - . Parent=GSCOCT00018481001 | |
| 45999 chr10 manual_curation exon 17791983 17792057 . - . Parent=GSCOCT00018481001 | |
| 46000 chr10 manual_curation exon 17795592 17796252 . - . Parent=GSCOCT00018481001 | |
| 46001 chr10 manual_curation CDS 17790341 17790383 . - 2 Parent=GSCOCT00018481001 | |
| 46002 chr10 manual_curation CDS 17790526 17791946 . - 0 Parent=GSCOCT00018481001 | |
| 46003 chr10 manual_curation CDS 17791983 17792057 . - 0 Parent=GSCOCT00018481001 | |
| 46004 chr10 manual_curation CDS 17795592 17795837 . - 0 Parent=GSCOCT00018481001 | |
| 46005 chr10 manual_curation gene 17810581 17812133 . + . ID=GSCOCG00018482001;Name=Cc10_g11280 | |
| 46006 chr10 manual_curation mRNA 17810581 17812133 . + . ID=GSCOCT00018482001;Parent=GSCOCG00018482001;Name=Cc10_g11280 | |
| 46007 chr10 manual_curation polypeptide 17811009 17811990 . + . ID=GSCOCP00018482001;Dbxref=InterPro:IPR006912,PFAM:PF04827,TAIR:AT1G43722.1,TAIR:AT5G35695.1,TAIR:AT5G41980.1,TrEMBL:A5BND9,TrEMBL:E5GBB2,TrEMBL:E5GCB5;Derives_from=GSCOCT00018482001;Name=Cc10_g11280;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:CONTAINS InterPro DOMAIN/s,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018482001~ CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ unknown_gene~ modules;original_location=join(715481..715519%2C715602..715827%2C715906..716462);owner=coffea | |
| 46008 chr10 manual_curation exon 17810581 17811047 . + . Parent=GSCOCT00018482001 | |
| 46009 chr10 manual_curation exon 17811130 17811355 . + . Parent=GSCOCT00018482001 | |
| 46010 chr10 manual_curation exon 17811434 17812133 . + . Parent=GSCOCT00018482001 | |
| 46011 chr10 manual_curation CDS 17811009 17811047 . + 0 Parent=GSCOCT00018482001 | |
| 46012 chr10 manual_curation CDS 17811130 17811355 . + 0 Parent=GSCOCT00018482001 | |
| 46013 chr10 manual_curation CDS 17811434 17811990 . + 1 Parent=GSCOCT00018482001 | |
| 46014 chr10 manual_curation gene 17823400 17825844 . + . ID=GSCOCG00018483001;Name=Cc10_g11290 | |
| 46015 chr10 manual_curation mRNA 17823400 17825844 . + . ID=GSCOCT00018483001;Parent=GSCOCG00018483001;Name=Cc10_g11290 | |
| 46016 chr10 manual_curation polypeptide 17823466 17825844 . + . ID=GSCOCP00018483001;Dbxref=InterPro:IPR000850,InterPro:IPR007862,PANTHER:PTHR23359,PFAM:PF00406,PFAM:PF05191,PRINTS:PR00094,PROSITE:PS00113,SwissProt:A8AJW9,SwissProt:P43188,SwissProt:Q9FIJ7,TAIR:AT5G35170.1,TAIR:AT5G47840.1,TAIR:AT5G63400.1,TrEMBL:B9IQE0,TrEMBL:B9MWG0,TrEMBL:D7MUT7;Derives_from=GSCOCT00018483001;Name=Cc10_g11290;Ontology_term=CC_evidence_code:ISS,GO:0004017,GO:0005524,CC_EC_number:2.7.4.3,PRODUCT:Predicted protein,CC_functional_completeness:complete,CC_gene:At5g47840,CC_gene:ADK1,CC_gene:adk;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018483001~ Predicted protein~ At5g47840~ complete;original_location=join(727938..728135%2C728290..728391%2C729312..729440%2C729516..729650%2C730161..730316);owner=coffea | |
| 46017 chr10 manual_curation exon 17823400 17823663 . + . Parent=GSCOCT00018483001 | |
| 46018 chr10 manual_curation exon 17823818 17823919 . + . Parent=GSCOCT00018483001 | |
| 46019 chr10 manual_curation exon 17824840 17824968 . + . Parent=GSCOCT00018483001 | |
| 46020 chr10 manual_curation exon 17825044 17825178 . + . Parent=GSCOCT00018483001 | |
| 46021 chr10 manual_curation exon 17825689 17825844 . + . Parent=GSCOCT00018483001 | |
| 46022 chr10 manual_curation CDS 17823466 17823663 . + 0 Parent=GSCOCT00018483001 | |
| 46023 chr10 manual_curation CDS 17823818 17823919 . + 0 Parent=GSCOCT00018483001 | |
| 46024 chr10 manual_curation CDS 17824840 17824968 . + 0 Parent=GSCOCT00018483001 | |
| 46025 chr10 manual_curation CDS 17825044 17825178 . + 0 Parent=GSCOCT00018483001 | |
| 46026 chr10 manual_curation CDS 17825689 17825844 . + 0 Parent=GSCOCT00018483001 | |
| 46027 chr10 manual_curation gene 17834018 17836321 . - . ID=GSCOCG00018485001;Name=Cc10_g11300 | |
| 46028 chr10 manual_curation mRNA 17834018 17836321 . - . ID=GSCOCT00018485001;Parent=GSCOCG00018485001;Name=Cc10_g11300 | |
| 46029 chr10 manual_curation polypeptide 17834018 17836321 . - . ID=GSCOCP00018485001;Dbxref=GENE3D:G3DSA:2.130.10.30,InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR009091,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF50985,SUPERFAMILY:SSF56112,SwissProt:O24585,SwissProt:Q9FIJ6,SwissProt:Q9LY50,TAIR:AT3G55950.1,TAIR:AT3G59420.1,TAIR:AT5G47850.1,TrEMBL:B9IQE1,TrEMBL:C6ZRU3,TrEMBL:Q9FUK3;Derives_from=GSCOCT00018485001;Name=Cc10_g11300;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Serine/threonine-protein kinase-like protein CCR4,CC_functional_completeness:complete,CC_gene:CCR4,CC_gene:CCR3,CC_gene:CR4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018485001~ Serine/threonine-protein kinase-like protein CCR4~ CCR4~ complete;original_location=complement(738490..740793);owner=coffea | |
| 46030 chr10 manual_curation exon 17834018 17836321 . - . Parent=GSCOCT00018485001 | |
| 46031 chr10 manual_curation CDS 17834018 17836321 . - 0 Parent=GSCOCT00018485001 | |
| 46032 chr10 manual_curation gene 17874761 17879948 . - . ID=GSCOCG00018487001;Name=Cc10_g11310 | |
| 46033 chr10 manual_curation mRNA 17874761 17879948 . - . ID=GSCOCT00018487001;Parent=GSCOCG00018487001;Name=Cc10_g11310 | |
| 46034 chr10 manual_curation polypeptide 17875140 17878381 . - . ID=GSCOCP00018487001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:P47735,SwissProt:Q9LJM4,SwissProt:Q9SGP2,TAIR:AT1G09970.2,TAIR:AT1G72180.1,TAIR:AT5G49660.1,TrEMBL:B9IQE2,TrEMBL:C6ZRU4,TrEMBL:F6I3U7;Derives_from=GSCOCT00018487001;Name=Cc10_g11310;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Receptor-like protein kinase HAIKU2,CC_functional_completeness:complete,CC_gene:IKU2,CC_gene:HSL1,CC_gene:RLK5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018487001~ Putative Receptor-like protein kinase HAIKU2~ IKU2~ complete;original_location=complement(join(782831..782853%2C780297..782764%2C779612..779979));owner=coffea | |
| 46035 chr10 manual_curation exon 17879468 17879948 . - . Parent=GSCOCT00018487001 | |
| 46036 chr10 manual_curation exon 17874761 17875507 . - . Parent=GSCOCT00018487001 | |
| 46037 chr10 manual_curation exon 17875825 17878292 . - . Parent=GSCOCT00018487001 | |
| 46038 chr10 manual_curation exon 17878359 17878519 . - . Parent=GSCOCT00018487001 | |
| 46039 chr10 manual_curation CDS 17875140 17875507 . - 1 Parent=GSCOCT00018487001 | |
| 46040 chr10 manual_curation CDS 17875825 17878292 . - 2 Parent=GSCOCT00018487001 | |
| 46041 chr10 manual_curation CDS 17878359 17878381 . - 0 Parent=GSCOCT00018487001 | |
| 46042 chr10 manual_curation gene 17894407 17907509 . - . ID=GSCOCG00018488001;Name=Cc10_g11320 | |
| 46043 chr10 manual_curation mRNA 17894407 17907509 . - . ID=GSCOCT00018488001;Parent=GSCOCG00018488001;Name=Cc10_g11320 | |
| 46044 chr10 manual_curation polypeptide 17894897 17907362 . - . ID=GSCOCP00018488001;Dbxref=InterPro:IPR006636,InterPro:IPR006773,PFAM:PF04683,SMART:SM00727,SwissProt:Q8GT66,SwissProt:Q9FMD5,TAIR:AT5G16620.1,TrEMBL:B9H3A6,TrEMBL:D7U970,TrEMBL:I1LM14;Derives_from=GSCOCT00018488001;Name=Cc10_g11320;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0005737,CC_EC_number:missing_EC_number,PRODUCT:Protein TIC 40%2C chloroplastic,CC_functional_completeness:complete,CC_gene:TIC40;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018488001~ Protein TIC 40%2C chloroplastic~ TIC40~ complete;original_location=complement(join(811651..811834%2C810211..810322%2C810009..810066%2C809886..809903%2C807036..807315%2C805998..806104%2C805825..805888%2C805356..805434%2C803732..803772%2C803190..803235%2C802088..802182%2C799947..800050%2C799729..799776%2C799369..799428));owner=coffea | |
| 46045 chr10 manual_curation exon 17894407 17894956 . - . Parent=GSCOCT00018488001 | |
| 46046 chr10 manual_curation exon 17895257 17895304 . - . Parent=GSCOCT00018488001 | |
| 46047 chr10 manual_curation exon 17895475 17895578 . - . Parent=GSCOCT00018488001 | |
| 46048 chr10 manual_curation exon 17897616 17897710 . - . Parent=GSCOCT00018488001 | |
| 46049 chr10 manual_curation exon 17898718 17898763 . - . Parent=GSCOCT00018488001 | |
| 46050 chr10 manual_curation exon 17899260 17899300 . - . Parent=GSCOCT00018488001 | |
| 46051 chr10 manual_curation exon 17900884 17900962 . - . Parent=GSCOCT00018488001 | |
| 46052 chr10 manual_curation exon 17901353 17901416 . - . Parent=GSCOCT00018488001 | |
| 46053 chr10 manual_curation exon 17901526 17901632 . - . Parent=GSCOCT00018488001 | |
| 46054 chr10 manual_curation exon 17902564 17902843 . - . Parent=GSCOCT00018488001 | |
| 46055 chr10 manual_curation exon 17905414 17905431 . - . Parent=GSCOCT00018488001 | |
| 46056 chr10 manual_curation exon 17905537 17905594 . - . Parent=GSCOCT00018488001 | |
| 46057 chr10 manual_curation exon 17905739 17905850 . - . Parent=GSCOCT00018488001 | |
| 46058 chr10 manual_curation exon 17907179 17907509 . - . Parent=GSCOCT00018488001 | |
| 46059 chr10 manual_curation CDS 17894897 17894956 . - 0 Parent=GSCOCT00018488001 | |
| 46060 chr10 manual_curation CDS 17895257 17895304 . - 0 Parent=GSCOCT00018488001 | |
| 46061 chr10 manual_curation CDS 17895475 17895578 . - 1 Parent=GSCOCT00018488001 | |
| 46062 chr10 manual_curation CDS 17897616 17897710 . - 2 Parent=GSCOCT00018488001 | |
| 46063 chr10 manual_curation CDS 17898718 17898763 . - 1 Parent=GSCOCT00018488001 | |
| 46064 chr10 manual_curation CDS 17899260 17899300 . - 2 Parent=GSCOCT00018488001 | |
| 46065 chr10 manual_curation CDS 17900884 17900962 . - 1 Parent=GSCOCT00018488001 | |
| 46066 chr10 manual_curation CDS 17901353 17901416 . - 0 Parent=GSCOCT00018488001 | |
| 46067 chr10 manual_curation CDS 17901526 17901632 . - 1 Parent=GSCOCT00018488001 | |
| 46068 chr10 manual_curation CDS 17902564 17902843 . - 0 Parent=GSCOCT00018488001 | |
| 46069 chr10 manual_curation CDS 17905414 17905431 . - 0 Parent=GSCOCT00018488001 | |
| 46070 chr10 manual_curation CDS 17905537 17905594 . - 2 Parent=GSCOCT00018488001 | |
| 46071 chr10 manual_curation CDS 17905739 17905850 . - 1 Parent=GSCOCT00018488001 | |
| 46072 chr10 manual_curation CDS 17907179 17907362 . - 0 Parent=GSCOCT00018488001 | |
| 46073 chr10 manual_curation gene 18117128 18118037 . + . ID=GSCOCG00018493001;Name=Cc10_g11330 | |
| 46074 chr10 manual_curation mRNA 18117128 18118037 . + . ID=GSCOCT00018493001;Parent=GSCOCG00018493001;Name=Cc10_g11330 | |
| 46075 chr10 manual_curation polypeptide 18117128 18118037 . + . ID=GSCOCP00018493001;Derives_from=GSCOCT00018493001;Name=Cc10_g11330;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018493001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(1021600..1021673%2C1021839..1021999%2C1022421..1022509);owner=coffea | |
| 46076 chr10 manual_curation exon 18117128 18117201 . + . Parent=GSCOCT00018493001 | |
| 46077 chr10 manual_curation exon 18117367 18117527 . + . Parent=GSCOCT00018493001 | |
| 46078 chr10 manual_curation exon 18117949 18118037 . + . Parent=GSCOCT00018493001 | |
| 46079 chr10 manual_curation CDS 18117128 18117201 . + 0 Parent=GSCOCT00018493001 | |
| 46080 chr10 manual_curation CDS 18117367 18117527 . + 2 Parent=GSCOCT00018493001 | |
| 46081 chr10 manual_curation CDS 18117949 18118037 . + 1 Parent=GSCOCT00018493001 | |
| 46082 chr10 manual_curation gene 18170373 18172214 . - . ID=GSCOCG00013649001;Name=Cc10_g11340 | |
| 46083 chr10 manual_curation mRNA 18170373 18172214 . - . ID=GSCOCT00013649001;Parent=GSCOCG00013649001;Name=Cc10_g11340 | |
| 46084 chr10 manual_curation polypeptide 18170373 18171926 . - . ID=GSCOCP00013649001;Derives_from=GSCOCT00013649001;Name=Cc10_g11340;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013649001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1359..1554%2C300..515%2C142..204%2C1..71));owner=coffea | |
| 46085 chr10 manual_curation exon 18170373 18170443 . - . Parent=GSCOCT00013649001 | |
| 46086 chr10 manual_curation exon 18170514 18170576 . - . Parent=GSCOCT00013649001 | |
| 46087 chr10 manual_curation exon 18170672 18170887 . - . Parent=GSCOCT00013649001 | |
| 46088 chr10 manual_curation exon 18171731 18172214 . - . Parent=GSCOCT00013649001 | |
| 46089 chr10 manual_curation CDS 18170373 18170443 . - 1 Parent=GSCOCT00013649001 | |
| 46090 chr10 manual_curation CDS 18170514 18170576 . - 1 Parent=GSCOCT00013649001 | |
| 46091 chr10 manual_curation CDS 18170672 18170887 . - 1 Parent=GSCOCT00013649001 | |
| 46092 chr10 manual_curation CDS 18171731 18171926 . - 0 Parent=GSCOCT00013649001 | |
| 46093 chr10 manual_curation gene 18172724 18173384 . + . ID=GSCOCG00013650001;Name=Cc10_g11350 | |
| 46094 chr10 manual_curation mRNA 18172724 18173384 . + . ID=GSCOCT00013650001;Parent=GSCOCG00013650001;Name=Cc10_g11350 | |
| 46095 chr10 manual_curation polypeptide 18173190 18173384 . + . ID=GSCOCP00013650001;Dbxref=SwissProt:O23617,SwissProt:Q9LMI0,TAIR:AT1G06410.1,TAIR:AT4G17770.1,TrEMBL:A5ARX0,TrEMBL:B9S8D6,TrEMBL:F6H533;Derives_from=GSCOCT00013650001;Name=Cc10_g11350;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Alpha%2Calpha-trehalose-phosphate synthase [UDP-forming] 5,CC_functional_completeness:fragment,CC_gene:TPS7,CC_gene:TPS5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013650001~ Alpha%2Calpha-trehalose-phosphate synthase [UDP-forming] 5~ TPS7~ fragment;original_location=2818..3012;owner=coffea | |
| 46096 chr10 manual_curation exon 18172724 18173384 . + . Parent=GSCOCT00013650001 | |
| 46097 chr10 manual_curation CDS 18173190 18173384 . + 0 Parent=GSCOCT00013650001 | |
| 46098 chr10 manual_curation gene 18173489 18188843 . + . ID=GSCOCG00013651001;Name=Cc10_g11360 | |
| 46099 chr10 manual_curation mRNA 18173489 18188843 . + . ID=GSCOCT00013651001;Parent=GSCOCG00013651001;Name=Cc10_g11360 | |
| 46100 chr10 manual_curation polypeptide 18173489 18188843 . + . ID=GSCOCP00013651001;Dbxref=InterPro:IPR010678,PANTHER:PTHR12933,PFAM:PF06862,SwissProt:Q642T7,SwissProt:Q68CQ4,SwissProt:Q8BTT6,TAIR:AT1G17690.1,TrEMBL:A5ALV2,TrEMBL:D7KFI4,TrEMBL:D7UBL1;Derives_from=GSCOCT00013651001;Name=Cc10_g11360;Ontology_term=CC_evidence_code:ISS,GO:0005634,CC_EC_number:missing_EC_number,PRODUCT:FUNCTIONS IN,CC_functional_completeness:fragment,CC_gene:diexf,CC_gene:DIEXF,CC_gene:Diexf;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013651001~ FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: nucleus%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Digestive organ expansion factor%2C predicted (InterPro:IPR010678)%3B Has 25006 Blast hits to 13379 proteins in 904 species: Archae - 102%3B Bacteria - 5571%3B Metazoa - 7448%3B Fungi - 3168%3B Plants - 1056%3B Viruses - 466%3B Other Eukaryotes - 7195 (source: NCBI BLink).~ diexf~ fragment;original_location=join(3117..3147%2C3214..3321%2C3406..3562%2C5265..5338%2C7089..7266%2C8089..8268%2C8842..9042%2C10515..10587%2C12556..12615%2C12821..12859%2C13147..13235%2C13718..13782%2C14674..14720%2C15679..15738%2C16049..16120%2C17904..17933%2C18029..18123%2C18267..18471);owner=coffea | |
| 46101 chr10 manual_curation exon 18173489 18173519 . + . Parent=GSCOCT00013651001 | |
| 46102 chr10 manual_curation exon 18173586 18173693 . + . Parent=GSCOCT00013651001 | |
| 46103 chr10 manual_curation exon 18173778 18173934 . + . Parent=GSCOCT00013651001 | |
| 46104 chr10 manual_curation exon 18175637 18175710 . + . Parent=GSCOCT00013651001 | |
| 46105 chr10 manual_curation exon 18177461 18177638 . + . Parent=GSCOCT00013651001 | |
| 46106 chr10 manual_curation exon 18178461 18178640 . + . Parent=GSCOCT00013651001 | |
| 46107 chr10 manual_curation exon 18179214 18179414 . + . Parent=GSCOCT00013651001 | |
| 46108 chr10 manual_curation exon 18180887 18180959 . + . Parent=GSCOCT00013651001 | |
| 46109 chr10 manual_curation exon 18182928 18182987 . + . Parent=GSCOCT00013651001 | |
| 46110 chr10 manual_curation exon 18183193 18183231 . + . Parent=GSCOCT00013651001 | |
| 46111 chr10 manual_curation exon 18183519 18183607 . + . Parent=GSCOCT00013651001 | |
| 46112 chr10 manual_curation exon 18184090 18184154 . + . Parent=GSCOCT00013651001 | |
| 46113 chr10 manual_curation exon 18185046 18185092 . + . Parent=GSCOCT00013651001 | |
| 46114 chr10 manual_curation exon 18186051 18186110 . + . Parent=GSCOCT00013651001 | |
| 46115 chr10 manual_curation exon 18186421 18186492 . + . Parent=GSCOCT00013651001 | |
| 46116 chr10 manual_curation exon 18188276 18188305 . + . Parent=GSCOCT00013651001 | |
| 46117 chr10 manual_curation exon 18188401 18188495 . + . Parent=GSCOCT00013651001 | |
| 46118 chr10 manual_curation exon 18188639 18188843 . + . Parent=GSCOCT00013651001 | |
| 46119 chr10 manual_curation CDS 18173489 18173519 . + 0 Parent=GSCOCT00013651001 | |
| 46120 chr10 manual_curation CDS 18173586 18173693 . + 1 Parent=GSCOCT00013651001 | |
| 46121 chr10 manual_curation CDS 18173778 18173934 . + 1 Parent=GSCOCT00013651001 | |
| 46122 chr10 manual_curation CDS 18175637 18175710 . + 2 Parent=GSCOCT00013651001 | |
| 46123 chr10 manual_curation CDS 18177461 18177638 . + 1 Parent=GSCOCT00013651001 | |
| 46124 chr10 manual_curation CDS 18178461 18178640 . + 2 Parent=GSCOCT00013651001 | |
| 46125 chr10 manual_curation CDS 18179214 18179414 . + 2 Parent=GSCOCT00013651001 | |
| 46126 chr10 manual_curation CDS 18180887 18180959 . + 2 Parent=GSCOCT00013651001 | |
| 46127 chr10 manual_curation CDS 18182928 18182987 . + 0 Parent=GSCOCT00013651001 | |
| 46128 chr10 manual_curation CDS 18183193 18183231 . + 0 Parent=GSCOCT00013651001 | |
| 46129 chr10 manual_curation CDS 18183519 18183607 . + 0 Parent=GSCOCT00013651001 | |
| 46130 chr10 manual_curation CDS 18184090 18184154 . + 2 Parent=GSCOCT00013651001 | |
| 46131 chr10 manual_curation CDS 18185046 18185092 . + 1 Parent=GSCOCT00013651001 | |
| 46132 chr10 manual_curation CDS 18186051 18186110 . + 0 Parent=GSCOCT00013651001 | |
| 46133 chr10 manual_curation CDS 18186421 18186492 . + 0 Parent=GSCOCT00013651001 | |
| 46134 chr10 manual_curation CDS 18188276 18188305 . + 0 Parent=GSCOCT00013651001 | |
| 46135 chr10 manual_curation CDS 18188401 18188495 . + 0 Parent=GSCOCT00013651001 | |
| 46136 chr10 manual_curation CDS 18188639 18188843 . + 2 Parent=GSCOCT00013651001 | |
| 46137 chr10 manual_curation gene 18237963 18238787 . + . ID=GSCOCG00013654001;Name=Cc10_g11370 | |
| 46138 chr10 manual_curation mRNA 18237963 18238787 . + . ID=GSCOCT00013654001;Parent=GSCOCG00013654001;Name=Cc10_g11370 | |
| 46139 chr10 manual_curation polypeptide 18237963 18238736 . + . ID=GSCOCP00013654001;Dbxref=TrEMBL:B9IQJ8,TrEMBL:B9MW73;Derives_from=GSCOCT00013654001;Name=Cc10_g11370;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Predicted protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013654001~ Putative Predicted protein~ unknown_gene~ complete;original_location=67591..68364;owner=coffea | |
| 46140 chr10 manual_curation exon 18237963 18238787 . + . Parent=GSCOCT00013654001 | |
| 46141 chr10 manual_curation CDS 18237963 18238736 . + 0 Parent=GSCOCT00013654001 | |
| 46142 chr10 manual_curation gene 18240197 18247340 . - . ID=GSCOCG00013655001;Name=Cc10_g11380 | |
| 46143 chr10 manual_curation mRNA 18240197 18247340 . - . ID=GSCOCT00013655001;Parent=GSCOCG00013655001;Name=Cc10_g11380 | |
| 46144 chr10 manual_curation polypeptide 18240764 18247085 . - . ID=GSCOCP00013655001;Dbxref=InterPro:IPR006852,PFAM:PF04765,TAIR:AT1G34550.1,TAIR:AT2G02910.1,TAIR:AT4G09630.1,TrEMBL:A5BHD2,TrEMBL:B9SLF7,TrEMBL:F6GY08;Derives_from=GSCOCT00013655001;Name=Cc10_g11380;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF616),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013655001~ Protein of unknown function (DUF616)~ unknown_gene~ complete;original_location=complement(join(76455..76713%2C74777..75577%2C73747..74099%2C72364..72575%2C70854..71110%2C70586..70764%2C70392..70472));owner=coffea | |
| 46145 chr10 manual_curation exon 18240197 18240844 . - . Parent=GSCOCT00013655001 | |
| 46146 chr10 manual_curation exon 18240958 18241136 . - . Parent=GSCOCT00013655001 | |
| 46147 chr10 manual_curation exon 18241226 18241482 . - . Parent=GSCOCT00013655001 | |
| 46148 chr10 manual_curation exon 18242736 18242947 . - . Parent=GSCOCT00013655001 | |
| 46149 chr10 manual_curation exon 18244119 18244471 . - . Parent=GSCOCT00013655001 | |
| 46150 chr10 manual_curation exon 18245149 18245949 . - . Parent=GSCOCT00013655001 | |
| 46151 chr10 manual_curation exon 18246827 18247340 . - . Parent=GSCOCT00013655001 | |
| 46152 chr10 manual_curation CDS 18240764 18240844 . - 0 Parent=GSCOCT00013655001 | |
| 46153 chr10 manual_curation CDS 18240958 18241136 . - 1 Parent=GSCOCT00013655001 | |
| 46154 chr10 manual_curation CDS 18241226 18241482 . - 2 Parent=GSCOCT00013655001 | |
| 46155 chr10 manual_curation CDS 18242736 18242947 . - 0 Parent=GSCOCT00013655001 | |
| 46156 chr10 manual_curation CDS 18244119 18244471 . - 1 Parent=GSCOCT00013655001 | |
| 46157 chr10 manual_curation CDS 18245149 18245949 . - 1 Parent=GSCOCT00013655001 | |
| 46158 chr10 manual_curation CDS 18246827 18247085 . - 0 Parent=GSCOCT00013655001 | |
| 46159 chr10 manual_curation gene 18271173 18277646 . + . ID=GSCOCG00013656001;Name=Cc10_g11390 | |
| 46160 chr10 manual_curation mRNA 18271173 18277646 . + . ID=GSCOCT00013656001;Parent=GSCOCG00013656001;Name=Cc10_g11390 | |
| 46161 chr10 manual_curation polypeptide 18275462 18277259 . + . ID=GSCOCP00013656001;Dbxref=InterPro:IPR003690,PFAM:PF02536,SMART:SM00733,TAIR:AT4G09620.1,TrEMBL:B9MW76,TrEMBL:B9SLF5,TrEMBL:D7SR84;Derives_from=GSCOCT00013656001;Name=Cc10_g11390;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013656001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=join(105090..105152%2C106306..106887);owner=coffea | |
| 46162 chr10 manual_curation exon 18271173 18271367 . + . Parent=GSCOCT00013656001 | |
| 46163 chr10 manual_curation exon 18273717 18273790 . + . Parent=GSCOCT00013656001 | |
| 46164 chr10 manual_curation exon 18275050 18275524 . + . Parent=GSCOCT00013656001 | |
| 46165 chr10 manual_curation exon 18276678 18277646 . + . Parent=GSCOCT00013656001 | |
| 46166 chr10 manual_curation CDS 18275462 18275524 . + 0 Parent=GSCOCT00013656001 | |
| 46167 chr10 manual_curation CDS 18276678 18277259 . + 0 Parent=GSCOCT00013656001 | |
| 46168 chr10 manual_curation gene 18285298 18289746 . + . ID=GSCOCG00013658001;Name=Cc10_g11400 | |
| 46169 chr10 manual_curation mRNA 18285298 18289746 . + . ID=GSCOCT00013658001;Parent=GSCOCG00013658001;Name=Cc10_g11400 | |
| 46170 chr10 manual_curation polypeptide 18285298 18289746 . + . ID=GSCOCP00013658001;Dbxref=InterPro:IPR002194,InterPro:IPR002423,InterPro:IPR012716,PANTHER:PTHR11353,PANTHER:PTHR11353:SF23,PFAM:PF00118,PROSITE:PS00995,SUPERFAMILY:SSF48592,SwissProt:P47207,SwissProt:Q3ZBH0,SwissProt:Q54ES9,TAIR:AT1G24510.1,TAIR:AT3G20050.1,TAIR:AT5G20890.1,TrEMBL:D9ZJD1,TrEMBL:F6H0C8,TrEMBL:G7KRA6;Derives_from=GSCOCT00013658001;Name=Cc10_g11400;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0005524,GO:0006457,GO:0044267,GO:0051082,CC_EC_number:missing_EC_number,PRODUCT:T-complex protein 1 subunit beta,CC_functional_completeness:fragment,CC_gene:cct-2,CC_gene:cct2,CC_gene:CCT2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013658001~ T-complex protein 1 subunit beta~ cct-2~ fragment;original_location=join(114926..114931%2C115034..115090%2C115228..115293%2C115668..115701%2C115730..115858%2C116538..116584%2C116878..117024%2C117106..117169%2C119109..119374);owner=coffea | |
| 46171 chr10 manual_curation exon 18285298 18285303 . + . Parent=GSCOCT00013658001 | |
| 46172 chr10 manual_curation exon 18285406 18285462 . + . Parent=GSCOCT00013658001 | |
| 46173 chr10 manual_curation exon 18285600 18285665 . + . Parent=GSCOCT00013658001 | |
| 46174 chr10 manual_curation exon 18286040 18286073 . + . Parent=GSCOCT00013658001 | |
| 46175 chr10 manual_curation exon 18286102 18286230 . + . Parent=GSCOCT00013658001 | |
| 46176 chr10 manual_curation exon 18286910 18286956 . + . Parent=GSCOCT00013658001 | |
| 46177 chr10 manual_curation exon 18287250 18287396 . + . Parent=GSCOCT00013658001 | |
| 46178 chr10 manual_curation exon 18287478 18287541 . + . Parent=GSCOCT00013658001 | |
| 46179 chr10 manual_curation exon 18289481 18289746 . + . Parent=GSCOCT00013658001 | |
| 46180 chr10 manual_curation CDS 18285298 18285303 . + 0 Parent=GSCOCT00013658001 | |
| 46181 chr10 manual_curation CDS 18285406 18285462 . + 0 Parent=GSCOCT00013658001 | |
| 46182 chr10 manual_curation CDS 18285600 18285665 . + 0 Parent=GSCOCT00013658001 | |
| 46183 chr10 manual_curation CDS 18286040 18286073 . + 0 Parent=GSCOCT00013658001 | |
| 46184 chr10 manual_curation CDS 18286102 18286230 . + 1 Parent=GSCOCT00013658001 | |
| 46185 chr10 manual_curation CDS 18286910 18286956 . + 1 Parent=GSCOCT00013658001 | |
| 46186 chr10 manual_curation CDS 18287250 18287396 . + 0 Parent=GSCOCT00013658001 | |
| 46187 chr10 manual_curation CDS 18287478 18287541 . + 0 Parent=GSCOCT00013658001 | |
| 46188 chr10 manual_curation CDS 18289481 18289746 . + 1 Parent=GSCOCT00013658001 | |
| 46189 chr10 manual_curation gene 18296369 18296914 . + . ID=GSCOCG00013659001;Name=Cc10_g11410 | |
| 46190 chr10 manual_curation mRNA 18296369 18296914 . + . ID=GSCOCT00013659001;Parent=GSCOCG00013659001;Name=Cc10_g11410 | |
| 46191 chr10 manual_curation polypeptide 18296369 18296914 . + . ID=GSCOCP00013659001;Dbxref=InterPro:IPR002423,InterPro:IPR012716,PANTHER:PTHR11353,PANTHER:PTHR11353:SF23,PFAM:PF00118,SUPERFAMILY:SSF48592,SwissProt:P78371,SwissProt:Q4R6F8,SwissProt:Q54ES9,TAIR:AT5G20890.1,TrEMBL:A5C537,TrEMBL:B9MTB4,TrEMBL:F6H0C8;Derives_from=GSCOCT00013659001;Name=Cc10_g11410;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0005524,GO:0006457,GO:0044267,GO:0051082,CC_EC_number:missing_EC_number,PRODUCT:Putative T-complex protein 1 subunit beta,CC_functional_completeness:fragment,CC_gene:cct2,CC_gene:CCT2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013659001~ Putative T-complex protein 1 subunit beta~ cct2~ fragment;original_location=join(125997..126073%2C126128..126206%2C126396..126542);owner=coffea | |
| 46192 chr10 manual_curation exon 18296369 18296445 . + . Parent=GSCOCT00013659001 | |
| 46193 chr10 manual_curation exon 18296500 18296578 . + . Parent=GSCOCT00013659001 | |
| 46194 chr10 manual_curation exon 18296768 18296914 . + . Parent=GSCOCT00013659001 | |
| 46195 chr10 manual_curation CDS 18296369 18296445 . + 0 Parent=GSCOCT00013659001 | |
| 46196 chr10 manual_curation CDS 18296500 18296578 . + 2 Parent=GSCOCT00013659001 | |
| 46197 chr10 manual_curation CDS 18296768 18296914 . + 0 Parent=GSCOCT00013659001 | |
| 46198 chr10 manual_curation gene 18325182 18325733 . - . ID=GSCOCG00013660001;Name=Cc10_g11420 | |
| 46199 chr10 manual_curation mRNA 18325182 18325733 . - . ID=GSCOCT00013660001;Parent=GSCOCG00013660001;Name=Cc10_g11420 | |
| 46200 chr10 manual_curation polypeptide 18325182 18325733 . - . ID=GSCOCP00013660001;Dbxref=InterPro:IPR008930,SUPERFAMILY:SSF48239,SwissProt:A8C980,SwissProt:A8CDT2,SwissProt:Q08IT1,TAIR:AT1G66960.1,TAIR:AT1G78960.1,TAIR:AT1G78970.2,TrEMBL:F4YF84,TrEMBL:H2ER43,TrEMBL:Q6QZW8;Derives_from=GSCOCT00013660001;Name=Cc10_g11420;Ontology_term=CC_evidence_code:ISS,CC_EC_number:5.4.99.8,PRODUCT:Dammarenediol II synthase,CC_functional_completeness:fragment,CC_gene:PNA,CC_gene:BAS,CC_gene:M1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013660001~ Dammarenediol II synthase~ PNA~ fragment;original_location=complement(join(155290..155361%2C155003..155245%2C154810..154914));owner=coffea | |
| 46201 chr10 manual_curation exon 18325182 18325286 . - . Parent=GSCOCT00013660001 | |
| 46202 chr10 manual_curation exon 18325375 18325617 . - . Parent=GSCOCT00013660001 | |
| 46203 chr10 manual_curation exon 18325662 18325733 . - . Parent=GSCOCT00013660001 | |
| 46204 chr10 manual_curation CDS 18325182 18325286 . - 0 Parent=GSCOCT00013660001 | |
| 46205 chr10 manual_curation CDS 18325375 18325617 . - 0 Parent=GSCOCT00013660001 | |
| 46206 chr10 manual_curation CDS 18325662 18325733 . - 0 Parent=GSCOCT00013660001 | |
| 46207 chr10 manual_curation gene 18334641 18336382 . + . ID=GSCOCG00013662001;Name=Cc10_g11430 | |
| 46208 chr10 manual_curation mRNA 18334641 18336382 . + . ID=GSCOCT00013662001;Parent=GSCOCG00013662001;Name=Cc10_g11430 | |
| 46209 chr10 manual_curation polypeptide 18334641 18336382 . + . ID=GSCOCP00013662001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:Q50EK0,SwissProt:Q50EK1,SwissProt:Q6WG30,TAIR:AT2G29090.1,TAIR:AT2G42850.1,TAIR:AT5G36110.1,TrEMBL:B9GT44,TrEMBL:G7K3D6,TrEMBL:I1JJ52;Derives_from=GSCOCT00013662001;Name=Cc10_g11430;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.77,PRODUCT:Putative Cytochrome P450 716B2,CC_functional_completeness:complete,CC_gene:CYP716B2,CC_gene:CYP716B1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013662001~ Putative Cytochrome P450 716B2~ CYP716B2~ complete;original_location=join(164269..165214%2C165272..165290%2C165473..165527%2C165714..166010);owner=coffea | |
| 46210 chr10 manual_curation exon 18334641 18335586 . + . Parent=GSCOCT00013662001 | |
| 46211 chr10 manual_curation exon 18335644 18335662 . + . Parent=GSCOCT00013662001 | |
| 46212 chr10 manual_curation exon 18335845 18335899 . + . Parent=GSCOCT00013662001 | |
| 46213 chr10 manual_curation exon 18336086 18336382 . + . Parent=GSCOCT00013662001 | |
| 46214 chr10 manual_curation CDS 18334641 18335586 . + 0 Parent=GSCOCT00013662001 | |
| 46215 chr10 manual_curation CDS 18335644 18335662 . + 1 Parent=GSCOCT00013662001 | |
| 46216 chr10 manual_curation CDS 18335845 18335899 . + 2 Parent=GSCOCT00013662001 | |
| 46217 chr10 manual_curation CDS 18336086 18336382 . + 0 Parent=GSCOCT00013662001 | |
| 46218 chr10 manual_curation gene 18356042 18356426 . - . ID=GSCOCG00013663001;Name=Cc10_g11440 | |
| 46219 chr10 manual_curation mRNA 18356042 18356426 . - . ID=GSCOCT00013663001;Parent=GSCOCG00013663001;Name=Cc10_g11440 | |
| 46220 chr10 manual_curation polypeptide 18356042 18356426 . - . ID=GSCOCP00013663001;Dbxref=GENE3D:G3DSA:2.60.40.420,InterPro:IPR008972,InterPro:IPR011707,PFAM:PF07732,SUPERFAMILY:SSF49503,SwissProt:Q9FHN6,TAIR:AT1G21850.1,TAIR:AT1G21860.1,TAIR:AT1G76160.1,TrEMBL:A5AIX9,TrEMBL:B9HL70,TrEMBL:B9T3G7;Derives_from=GSCOCT00013663001;Name=Cc10_g11440;Ontology_term=CC_evidence_code:ISS,GO:0005507,GO:0016491,GO:0055114,CC_EC_number:missing_EC_number,PRODUCT:Monocopper oxidase-like protein SKS2,CC_functional_completeness:fragment,CC_gene:SKS2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013663001~ Monocopper oxidase-like protein SKS2~ SKS2~ fragment;original_location=complement(join(185905..186054%2C185670..185783));owner=coffea | |
| 46221 chr10 manual_curation exon 18356042 18356155 . - . Parent=GSCOCT00013663001 | |
| 46222 chr10 manual_curation exon 18356277 18356426 . - . Parent=GSCOCT00013663001 | |
| 46223 chr10 manual_curation CDS 18356042 18356155 . - 0 Parent=GSCOCT00013663001 | |
| 46224 chr10 manual_curation CDS 18356277 18356426 . - 0 Parent=GSCOCT00013663001 | |
| 46225 chr10 manual_curation gene 18441819 18444392 . + . ID=GSCOCG00013664001;Name=Cc10_g11450 | |
| 46226 chr10 manual_curation mRNA 18441819 18444392 . + . ID=GSCOCT00013664001;Parent=GSCOCG00013664001;Name=Cc10_g11450 | |
| 46227 chr10 manual_curation polypeptide 18441904 18444248 . + . ID=GSCOCP00013664001;Dbxref=InterPro:IPR003854,PFAM:PF02704,SwissProt:P46687,SwissProt:Q8GWK5,SwissProt:Q93X17,TAIR:AT1G22690.1,TAIR:AT4G09600.1,TAIR:AT5G14920.1,TrEMBL:A9NKH2,TrEMBL:D7SR86,TrEMBL:H6TNT0;Derives_from=GSCOCT00013664001;Name=Cc10_g11450;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Gibberellin-regulated protein 9,CC_functional_completeness:complete,CC_gene:GASA9,CC_gene:GASA3,CC_gene:SN2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013664001~ Putative Gibberellin-regulated protein 9~ GASA9~ complete;original_location=join(271532..271576%2C271712..271765%2C273533..273563%2C273695..273876);owner=coffea | |
| 46228 chr10 manual_curation exon 18441819 18441948 . + . Parent=GSCOCT00013664001 | |
| 46229 chr10 manual_curation exon 18442084 18442137 . + . Parent=GSCOCT00013664001 | |
| 46230 chr10 manual_curation exon 18443905 18443935 . + . Parent=GSCOCT00013664001 | |
| 46231 chr10 manual_curation exon 18444067 18444392 . + . Parent=GSCOCT00013664001 | |
| 46232 chr10 manual_curation CDS 18441904 18441948 . + 0 Parent=GSCOCT00013664001 | |
| 46233 chr10 manual_curation CDS 18442084 18442137 . + 0 Parent=GSCOCT00013664001 | |
| 46234 chr10 manual_curation CDS 18443905 18443935 . + 0 Parent=GSCOCT00013664001 | |
| 46235 chr10 manual_curation CDS 18444067 18444248 . + 1 Parent=GSCOCT00013664001 | |
| 46236 chr10 manual_curation gene 18449231 18458770 . + . ID=GSCOCG00013665001;Name=Cc10_g11460 | |
| 46237 chr10 manual_curation mRNA 18449231 18458770 . + . ID=GSCOCT00013665001;Parent=GSCOCG00013665001;Name=Cc10_g11460 | |
| 46238 chr10 manual_curation polypeptide 18450050 18457991 . + . ID=GSCOCP00013665001;Dbxref=GENE3D:G3DSA:1.10.287.110,InterPro:IPR001623,InterPro:IPR003095,InterPro:IPR022226,PFAM:PF00226,PFAM:PF12572,PRINTS:PR00625,PROFILE:PS50076,SMART:SM00271,SUPERFAMILY:SSF46565,SwissProt:Q4V893,SwissProt:Q69ZC8,TAIR:AT1G65280.1,TAIR:AT5G22080.1,TrEMBL:A5AXU1,TrEMBL:B9SLF1,TrEMBL:I1LD73;Derives_from=GSCOCT00013665001;Name=Cc10_g11460;Ontology_term=CC_evidence_code:ISS,GO:0006457,GO:0031072,GO:0051082,CC_EC_number:missing_EC_number,PRODUCT:DNAJ heat shock N-terminal domain-containing protein,CC_functional_completeness:complete,CC_gene:Kiaa1704;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013665001~ DNAJ heat shock N-terminal domain-containing protein~ Kiaa1704~ complete;original_location=join(279678..280094%2C280493..280812%2C281191..281268%2C281436..281538%2C282653..282741%2C283852..283963%2C284511..284564%2C284652..284700%2C286078..286178%2C287084..287196%2C287280..287619);owner=coffea | |
| 46239 chr10 manual_curation exon 18449231 18449505 . + . Parent=GSCOCT00013665001 | |
| 46240 chr10 manual_curation exon 18449697 18449937 . + . Parent=GSCOCT00013665001 | |
| 46241 chr10 manual_curation exon 18450045 18450466 . + . Parent=GSCOCT00013665001 | |
| 46242 chr10 manual_curation exon 18450865 18451184 . + . Parent=GSCOCT00013665001 | |
| 46243 chr10 manual_curation exon 18451563 18451640 . + . Parent=GSCOCT00013665001 | |
| 46244 chr10 manual_curation exon 18451808 18451910 . + . Parent=GSCOCT00013665001 | |
| 46245 chr10 manual_curation exon 18453025 18453113 . + . Parent=GSCOCT00013665001 | |
| 46246 chr10 manual_curation exon 18454224 18454335 . + . Parent=GSCOCT00013665001 | |
| 46247 chr10 manual_curation exon 18454883 18454936 . + . Parent=GSCOCT00013665001 | |
| 46248 chr10 manual_curation exon 18455024 18455072 . + . Parent=GSCOCT00013665001 | |
| 46249 chr10 manual_curation exon 18456450 18456550 . + . Parent=GSCOCT00013665001 | |
| 46250 chr10 manual_curation exon 18457456 18457568 . + . Parent=GSCOCT00013665001 | |
| 46251 chr10 manual_curation exon 18457652 18458770 . + . Parent=GSCOCT00013665001 | |
| 46252 chr10 manual_curation CDS 18450050 18450466 . + 0 Parent=GSCOCT00013665001 | |
| 46253 chr10 manual_curation CDS 18450865 18451184 . + 0 Parent=GSCOCT00013665001 | |
| 46254 chr10 manual_curation CDS 18451563 18451640 . + 2 Parent=GSCOCT00013665001 | |
| 46255 chr10 manual_curation CDS 18451808 18451910 . + 2 Parent=GSCOCT00013665001 | |
| 46256 chr10 manual_curation CDS 18453025 18453113 . + 0 Parent=GSCOCT00013665001 | |
| 46257 chr10 manual_curation CDS 18454224 18454335 . + 2 Parent=GSCOCT00013665001 | |
| 46258 chr10 manual_curation CDS 18454883 18454936 . + 0 Parent=GSCOCT00013665001 | |
| 46259 chr10 manual_curation CDS 18455024 18455072 . + 0 Parent=GSCOCT00013665001 | |
| 46260 chr10 manual_curation CDS 18456450 18456550 . + 1 Parent=GSCOCT00013665001 | |
| 46261 chr10 manual_curation CDS 18457456 18457568 . + 0 Parent=GSCOCT00013665001 | |
| 46262 chr10 manual_curation CDS 18457652 18457991 . + 2 Parent=GSCOCT00013665001 | |
| 46263 chr10 manual_curation gene 18476245 18478476 . + . ID=GSCOCG00013666001;Name=Cc10_g11470 | |
| 46264 chr10 manual_curation mRNA 18476245 18478476 . + . ID=GSCOCT00013666001;Parent=GSCOCG00013666001;Name=Cc10_g11470 | |
| 46265 chr10 manual_curation polypeptide 18476245 18478476 . + . ID=GSCOCP00013666001;Dbxref=InterPro:IPR003441,PFAM:PF02365,PROFILE:PS51005,SUPERFAMILY:SSF101941,SwissProt:Q84WP6,SwissProt:Q9C878,SwissProt:Q9FWX2,TAIR:AT1G71930.1,TAIR:AT2G18060.1,TAIR:AT4G36160.1,TrEMBL:B9MW79,TrEMBL:D7SR91,TrEMBL:E5KUI2;Derives_from=GSCOCT00013666001;Name=Cc10_g11470;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative NAC domain-containing protein 7,CC_functional_completeness:complete,CC_gene:NAC007,CC_gene:NAC043,CC_gene:BRN1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013666001~ Putative NAC domain-containing protein 7~ NAC007~ complete;original_location=join(305873..306032%2C306430..306705%2C307584..308104);owner=coffea | |
| 46266 chr10 manual_curation exon 18476245 18476404 . + . Parent=GSCOCT00013666001 | |
| 46267 chr10 manual_curation exon 18476802 18477077 . + . Parent=GSCOCT00013666001 | |
| 46268 chr10 manual_curation exon 18477956 18478476 . + . Parent=GSCOCT00013666001 | |
| 46269 chr10 manual_curation CDS 18476245 18476404 . + 0 Parent=GSCOCT00013666001 | |
| 46270 chr10 manual_curation CDS 18476802 18477077 . + 1 Parent=GSCOCT00013666001 | |
| 46271 chr10 manual_curation CDS 18477956 18478476 . + 1 Parent=GSCOCT00013666001 | |
| 46272 chr10 manual_curation gene 18621220 18626397 . - . ID=GSCOCG00013671001;Name=Cc10_g11480 | |
| 46273 chr10 manual_curation mRNA 18621220 18626397 . - . ID=GSCOCT00013671001;Parent=GSCOCG00013671001;Name=Cc10_g11480 | |
| 46274 chr10 manual_curation polypeptide 18621220 18626397 . - . ID=GSCOCP00013671001;Dbxref=GENE3D:G3DSA:2.60.40.420,InterPro:IPR001117,InterPro:IPR008972,InterPro:IPR011706,InterPro:IPR011707,PFAM:PF00394,PFAM:PF07731,PFAM:PF07732,SUPERFAMILY:SSF49503,SwissProt:Q8VXX5,SwissProt:Q9FHN6,SwissProt:Q9SU40,TAIR:AT1G21850.1,TAIR:AT5G48450.1,TAIR:AT5G51480.1,TrEMBL:A5AIX9,TrEMBL:B9HL70,TrEMBL:B9HL71;Derives_from=GSCOCT00013671001;Name=Cc10_g11480;Ontology_term=CC_evidence_code:ISS,GO:0005507,GO:0016491,GO:0055114,CC_EC_number:1.10.3.3,PRODUCT:Putative Monocopper oxidase-like protein SKS2,CC_functional_completeness:complete,CC_gene:SKS2,CC_gene:SKU5,CC_gene:SKS1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013671001~ Putative Monocopper oxidase-like protein SKS2~ SKS2~ complete;original_location=complement(join(455876..456025%2C455645..455754%2C454410..454624%2C453619..453661%2C453110..453562%2C452277..452648%2C451297..451375%2C450848..451030));owner=coffea | |
| 46275 chr10 manual_curation exon 18621220 18621402 . - . Parent=GSCOCT00013671001 | |
| 46276 chr10 manual_curation exon 18621669 18621747 . - . Parent=GSCOCT00013671001 | |
| 46277 chr10 manual_curation exon 18622649 18623020 . - . Parent=GSCOCT00013671001 | |
| 46278 chr10 manual_curation exon 18623482 18623934 . - . Parent=GSCOCT00013671001 | |
| 46279 chr10 manual_curation exon 18623991 18624033 . - . Parent=GSCOCT00013671001 | |
| 46280 chr10 manual_curation exon 18624782 18624996 . - . Parent=GSCOCT00013671001 | |
| 46281 chr10 manual_curation exon 18626017 18626126 . - . Parent=GSCOCT00013671001 | |
| 46282 chr10 manual_curation exon 18626248 18626397 . - . Parent=GSCOCT00013671001 | |
| 46283 chr10 manual_curation CDS 18621220 18621402 . - 0 Parent=GSCOCT00013671001 | |
| 46284 chr10 manual_curation CDS 18621669 18621747 . - 2 Parent=GSCOCT00013671001 | |
| 46285 chr10 manual_curation CDS 18622649 18623020 . - 2 Parent=GSCOCT00013671001 | |
| 46286 chr10 manual_curation CDS 18623482 18623934 . - 2 Parent=GSCOCT00013671001 | |
| 46287 chr10 manual_curation CDS 18623991 18624033 . - 1 Parent=GSCOCT00013671001 | |
| 46288 chr10 manual_curation CDS 18624782 18624996 . - 2 Parent=GSCOCT00013671001 | |
| 46289 chr10 manual_curation CDS 18626017 18626126 . - 0 Parent=GSCOCT00013671001 | |
| 46290 chr10 manual_curation CDS 18626248 18626397 . - 0 Parent=GSCOCT00013671001 | |
| 46291 chr10 manual_curation gene 18635131 18635336 . + . ID=GSCOCG00013672001;Name=Cc10_g11490 | |
| 46292 chr10 manual_curation mRNA 18635131 18635336 . + . ID=GSCOCT00013672001;Parent=GSCOCG00013672001;Name=Cc10_g11490 | |
| 46293 chr10 manual_curation polypeptide 18635131 18635336 . + . ID=GSCOCP00013672001;Derives_from=GSCOCT00013672001;Name=Cc10_g11490;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013672001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(464759..464805%2C464868..464964);owner=coffea | |
| 46294 chr10 manual_curation exon 18635131 18635177 . + . Parent=GSCOCT00013672001 | |
| 46295 chr10 manual_curation exon 18635240 18635336 . + . Parent=GSCOCT00013672001 | |
| 46296 chr10 manual_curation CDS 18635131 18635177 . + 0 Parent=GSCOCT00013672001 | |
| 46297 chr10 manual_curation CDS 18635240 18635336 . + 2 Parent=GSCOCT00013672001 | |
| 46298 chr10 manual_curation gene 18769616 18773004 . - . ID=GSCOCG00013674001;Name=Cc10_g11500 | |
| 46299 chr10 manual_curation mRNA 18769616 18773004 . - . ID=GSCOCT00013674001;Parent=GSCOCG00013674001;Name=Cc10_g11500 | |
| 46300 chr10 manual_curation polypeptide 18770659 18772919 . - . ID=GSCOCP00013674001;Dbxref=InterPro:IPR003854,PFAM:PF02704,SwissProt:P46687,SwissProt:Q8GWK5,SwissProt:Q93X17,TAIR:AT1G22690.1,TAIR:AT4G09600.1,TAIR:AT5G14920.1,TrEMBL:A9NKH2,TrEMBL:D7SR86,TrEMBL:H6TNT0;Derives_from=GSCOCT00013674001;Name=Cc10_g11500;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Gibberellin-regulated protein 9,CC_functional_completeness:complete,CC_gene:GASA9,CC_gene:GASA3,CC_gene:SN2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013674001~ Putative Gibberellin-regulated protein 9~ GASA9~ complete;original_location=complement(join(602503..602547%2C602314..602367%2C600600..600630%2C600287..600468));owner=coffea | |
| 46301 chr10 manual_curation exon 18769616 18770840 . - . Parent=GSCOCT00013674001 | |
| 46302 chr10 manual_curation exon 18770972 18771002 . - . Parent=GSCOCT00013674001 | |
| 46303 chr10 manual_curation exon 18772686 18772739 . - . Parent=GSCOCT00013674001 | |
| 46304 chr10 manual_curation exon 18772875 18773004 . - . Parent=GSCOCT00013674001 | |
| 46305 chr10 manual_curation CDS 18770659 18770840 . - 1 Parent=GSCOCT00013674001 | |
| 46306 chr10 manual_curation CDS 18770972 18771002 . - 0 Parent=GSCOCT00013674001 | |
| 46307 chr10 manual_curation CDS 18772686 18772739 . - 0 Parent=GSCOCT00013674001 | |
| 46308 chr10 manual_curation CDS 18772875 18772919 . - 0 Parent=GSCOCT00013674001 | |
| 46309 chr10 manual_curation gene 18891070 18892416 . + . ID=GSCOCG00013677001;Name=Cc10_g11510 | |
| 46310 chr10 manual_curation mRNA 18891070 18892416 . + . ID=GSCOCT00013677001;Parent=GSCOCG00013677001;Name=Cc10_g11510 | |
| 46311 chr10 manual_curation polypeptide 18891070 18892416 . + . ID=GSCOCP00013677001;Dbxref=InterPro:IPR001208,PFAM:PF00493,PROFILE:PS50051,SMART:SM00350,SwissProt:P55862,SwissProt:Q561P5,SwissProt:Q9VGW6,TAIR:AT2G07690.1,TAIR:AT2G16440.1,TAIR:AT5G44635.1,TrEMBL:D7T529,TrEMBL:I1LZM7,TrEMBL:I1MTX9;Derives_from=GSCOCT00013677001;Name=Cc10_g11510;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0005524,GO:0006260,CC_EC_number:missing_EC_number,PRODUCT:Putative DNA-dependent ATPase MCM,CC_functional_completeness:complete,CC_gene:Mcm5,CC_gene:mcm5-a,CC_gene:mcm5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013677001~ Putative DNA-dependent ATPase MCM~ Mcm5~ complete;original_location=join(720698..721289%2C721473..722044);owner=coffea | |
| 46312 chr10 manual_curation exon 18891070 18891661 . + . Parent=GSCOCT00013677001 | |
| 46313 chr10 manual_curation exon 18891845 18892416 . + . Parent=GSCOCT00013677001 | |
| 46314 chr10 manual_curation CDS 18891070 18891661 . + 0 Parent=GSCOCT00013677001 | |
| 46315 chr10 manual_curation CDS 18891845 18892416 . + 1 Parent=GSCOCT00013677001 | |
| 46316 chr10 manual_curation gene 19067181 19068409 . + . ID=GSCOCG00008276001;Name=Cc10_g11520 | |
| 46317 chr10 manual_curation mRNA 19067181 19068409 . + . ID=GSCOCT00008276001;Parent=GSCOCG00008276001;Name=Cc10_g11520 | |
| 46318 chr10 manual_curation polypeptide 19067237 19068409 . + . ID=GSCOCP00008276001;Dbxref=InterPro:IPR000152,InterPro:IPR000742,InterPro:IPR001881,InterPro:IPR006210,InterPro:IPR013091,InterPro:IPR013695,InterPro:IPR018097,PFAM:PF07645,PFAM:PF08488,PROFILE:PS50026,PROSITE:PS00010,PROSITE:PS01187,SMART:SM00179,SMART:SM00181,SwissProt:Q39191,SwissProt:Q9LMN7,SwissProt:Q9LMP1,TAIR:AT1G21230.1,TAIR:AT1G21250.1,TAIR:AT1G21270.1,TrEMBL:B9HBH7,TrEMBL:F6GSN9,TrEMBL:F6H0F7;Derives_from=GSCOCT00008276001;Name=Cc10_g11520;Ontology_term=CC_evidence_code:ISS,GO:0004674,GO:0005509,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Putative Wall-associated receptor kinase 2,CC_functional_completeness:fragment,CC_gene:WAK2,CC_gene:WAK1,CC_gene:WAK5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00008276001~ Putative Wall-associated receptor kinase 2~ WAK2~ fragment;original_location=join(1386..2274%2C2386..2558);owner=coffea | |
| 46319 chr10 manual_curation exon 19067181 19068125 . + . Parent=GSCOCT00008276001 | |
| 46320 chr10 manual_curation exon 19068237 19068409 . + . Parent=GSCOCT00008276001 | |
| 46321 chr10 manual_curation CDS 19067237 19068125 . + 0 Parent=GSCOCT00008276001 | |
| 46322 chr10 manual_curation CDS 19068237 19068409 . + 1 Parent=GSCOCT00008276001 | |
| 46323 chr10 manual_curation gene 19113123 19114712 . - . ID=GSCOCG00001417001;Name=Cc10_g11530 | |
| 46324 chr10 manual_curation mRNA 19113123 19114712 . - . ID=GSCOCT00001417001;Parent=GSCOCG00001417001;Name=Cc10_g11530 | |
| 46325 chr10 manual_curation polypeptide 19113123 19114712 . - . ID=GSCOCP00001417001;Dbxref=InterPro:IPR003445,PFAM:PF02386,SwissProt:A2YGP9,SwissProt:Q0D9S3,SwissProt:Q84TI7,TAIR:AT4G10310.1,TrEMBL:A5AN75,TrEMBL:F6I5R0,TrEMBL:I1J4B2;Derives_from=GSCOCT00001417001;Name=Cc10_g11530;Ontology_term=CC_evidence_code:ISS,GO:0006812,GO:0008324,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Putative Cation transporter,CC_functional_completeness:complete,CC_gene:HKT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001417001~ Putative Cation transporter~ HKT1~ complete;original_location=complement(join(45744..45929%2C45647..45659%2C45155..45295%2C44340..45007));owner=coffea | |
| 46326 chr10 manual_curation exon 19113123 19113790 . - . Parent=GSCOCT00001417001 | |
| 46327 chr10 manual_curation exon 19113938 19114078 . - . Parent=GSCOCT00001417001 | |
| 46328 chr10 manual_curation exon 19114430 19114442 . - . Parent=GSCOCT00001417001 | |
| 46329 chr10 manual_curation exon 19114527 19114712 . - . Parent=GSCOCT00001417001 | |
| 46330 chr10 manual_curation CDS 19113123 19113790 . - 1 Parent=GSCOCT00001417001 | |
| 46331 chr10 manual_curation CDS 19113938 19114078 . - 1 Parent=GSCOCT00001417001 | |
| 46332 chr10 manual_curation CDS 19114430 19114442 . - 0 Parent=GSCOCT00001417001 | |
| 46333 chr10 manual_curation CDS 19114527 19114712 . - 0 Parent=GSCOCT00001417001 | |
| 46334 chr10 manual_curation gene 19139861 19144244 . - . ID=GSCOCG00001419001;Name=Cc10_g11540 | |
| 46335 chr10 manual_curation mRNA 19139861 19144244 . - . ID=GSCOCT00001419001;Parent=GSCOCG00001419001;Name=Cc10_g11540 | |
| 46336 chr10 manual_curation polypeptide 19140079 19143635 . - . ID=GSCOCP00001419001;Dbxref=TAIR:AT5G37480.1,TrEMBL:D7MID3,TrEMBL:I1M023,TrEMBL:I1N5T7;Derives_from=GSCOCT00001419001;Name=Cc10_g11540;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B Has 30201 Blast hits to 17322 proteins in 780 species,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001419001~ Putative unknown protein%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ unknown_gene~ modules;original_location=complement(join(74809..74852%2C74170..74308%2C73579..73819%2C73433..73488%2C71296..71466));owner=coffea | |
| 46337 chr10 manual_curation exon 19139861 19140249 . - . Parent=GSCOCT00001419001 | |
| 46338 chr10 manual_curation exon 19142216 19142271 . - . Parent=GSCOCT00001419001 | |
| 46339 chr10 manual_curation exon 19142362 19142602 . - . Parent=GSCOCT00001419001 | |
| 46340 chr10 manual_curation exon 19142953 19143091 . - . Parent=GSCOCT00001419001 | |
| 46341 chr10 manual_curation exon 19143592 19144244 . - . Parent=GSCOCT00001419001 | |
| 46342 chr10 manual_curation CDS 19140079 19140249 . - 0 Parent=GSCOCT00001419001 | |
| 46343 chr10 manual_curation CDS 19142216 19142271 . - 1 Parent=GSCOCT00001419001 | |
| 46344 chr10 manual_curation CDS 19142362 19142602 . - 0 Parent=GSCOCT00001419001 | |
| 46345 chr10 manual_curation CDS 19142953 19143091 . - 2 Parent=GSCOCT00001419001 | |
| 46346 chr10 manual_curation CDS 19143592 19143635 . - 0 Parent=GSCOCT00001419001 | |
| 46347 chr10 manual_curation gene 19204444 19221369 . + . ID=GSCOCG00001423001;Name=Cc10_g11550 | |
| 46348 chr10 manual_curation mRNA 19204444 19221369 . + . ID=GSCOCT00001423001;Parent=GSCOCG00001423001;Name=Cc10_g11550 | |
| 46349 chr10 manual_curation polypeptide 19204749 19220938 . + . ID=GSCOCP00001423001;Dbxref=GENE3D:G3DSA:2.60.40.10,GENE3D:G3DSA:3.20.20.80,InterPro:IPR004193,InterPro:IPR006047,InterPro:IPR006589,InterPro:IPR013781,InterPro:IPR013783,InterPro:IPR014756,InterPro:IPR017853,PFAM:PF00128,PFAM:PF02922,SMART:SM00642,SUPERFAMILY:SSF51445,SUPERFAMILY:SSF81296,SwissProt:O04196,SwissProt:P0A4Y4,SwissProt:Q9M0S5,TAIR:AT1G03310.2,TAIR:AT2G39930.1,TAIR:AT4G09020.1,TrEMBL:B9HAL8,TrEMBL:B9IN05,TrEMBL:Q84YG7;Derives_from=GSCOCT00001423001;Name=Cc10_g11550;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0043169,CC_EC_number:3.2.1.68,PRODUCT:Isoamylase 1%2C chloroplastic,CC_functional_completeness:complete,CC_gene:ISA1,CC_gene:ISA3,CC_gene:glgX;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001423001~ Isoamylase 1%2C chloroplastic~ ISA1~ complete;original_location=join(135966..136364%2C136554..136736%2C136895..136987%2C138321..138473%2C139095..139247%2C141266..141357%2C141984..142125%2C142210..142317%2C143030..143115%2C145612..145683%2C145774..145900%2C146193..146279%2C147181..147273%2C147513..147671%2C149769..149852%2C150433..150513%2C150594..150676%2C150765..150882%2C151892..152155);owner=coffea | |
| 46350 chr10 manual_curation exon 19204444 19205147 . + . Parent=GSCOCT00001423001 | |
| 46351 chr10 manual_curation exon 19205337 19205519 . + . Parent=GSCOCT00001423001 | |
| 46352 chr10 manual_curation exon 19205678 19205770 . + . Parent=GSCOCT00001423001 | |
| 46353 chr10 manual_curation exon 19207104 19207256 . + . Parent=GSCOCT00001423001 | |
| 46354 chr10 manual_curation exon 19207878 19208030 . + . Parent=GSCOCT00001423001 | |
| 46355 chr10 manual_curation exon 19210049 19210140 . + . Parent=GSCOCT00001423001 | |
| 46356 chr10 manual_curation exon 19210767 19210908 . + . Parent=GSCOCT00001423001 | |
| 46357 chr10 manual_curation exon 19210993 19211100 . + . Parent=GSCOCT00001423001 | |
| 46358 chr10 manual_curation exon 19211813 19211898 . + . Parent=GSCOCT00001423001 | |
| 46359 chr10 manual_curation exon 19214395 19214466 . + . Parent=GSCOCT00001423001 | |
| 46360 chr10 manual_curation exon 19214557 19214683 . + . Parent=GSCOCT00001423001 | |
| 46361 chr10 manual_curation exon 19214976 19215062 . + . Parent=GSCOCT00001423001 | |
| 46362 chr10 manual_curation exon 19215964 19216056 . + . Parent=GSCOCT00001423001 | |
| 46363 chr10 manual_curation exon 19216296 19216454 . + . Parent=GSCOCT00001423001 | |
| 46364 chr10 manual_curation exon 19218552 19218635 . + . Parent=GSCOCT00001423001 | |
| 46365 chr10 manual_curation exon 19219216 19219296 . + . Parent=GSCOCT00001423001 | |
| 46366 chr10 manual_curation exon 19219377 19219459 . + . Parent=GSCOCT00001423001 | |
| 46367 chr10 manual_curation exon 19219548 19219665 . + . Parent=GSCOCT00001423001 | |
| 46368 chr10 manual_curation exon 19220675 19221369 . + . Parent=GSCOCT00001423001 | |
| 46369 chr10 manual_curation CDS 19204749 19205147 . + 0 Parent=GSCOCT00001423001 | |
| 46370 chr10 manual_curation CDS 19205337 19205519 . + 0 Parent=GSCOCT00001423001 | |
| 46371 chr10 manual_curation CDS 19205678 19205770 . + 0 Parent=GSCOCT00001423001 | |
| 46372 chr10 manual_curation CDS 19207104 19207256 . + 0 Parent=GSCOCT00001423001 | |
| 46373 chr10 manual_curation CDS 19207878 19208030 . + 0 Parent=GSCOCT00001423001 | |
| 46374 chr10 manual_curation CDS 19210049 19210140 . + 0 Parent=GSCOCT00001423001 | |
| 46375 chr10 manual_curation CDS 19210767 19210908 . + 2 Parent=GSCOCT00001423001 | |
| 46376 chr10 manual_curation CDS 19210993 19211100 . + 0 Parent=GSCOCT00001423001 | |
| 46377 chr10 manual_curation CDS 19211813 19211898 . + 0 Parent=GSCOCT00001423001 | |
| 46378 chr10 manual_curation CDS 19214395 19214466 . + 2 Parent=GSCOCT00001423001 | |
| 46379 chr10 manual_curation CDS 19214557 19214683 . + 2 Parent=GSCOCT00001423001 | |
| 46380 chr10 manual_curation CDS 19214976 19215062 . + 0 Parent=GSCOCT00001423001 | |
| 46381 chr10 manual_curation CDS 19215964 19216056 . + 0 Parent=GSCOCT00001423001 | |
| 46382 chr10 manual_curation CDS 19216296 19216454 . + 0 Parent=GSCOCT00001423001 | |
| 46383 chr10 manual_curation CDS 19218552 19218635 . + 0 Parent=GSCOCT00001423001 | |
| 46384 chr10 manual_curation CDS 19219216 19219296 . + 0 Parent=GSCOCT00001423001 | |
| 46385 chr10 manual_curation CDS 19219377 19219459 . + 0 Parent=GSCOCT00001423001 | |
| 46386 chr10 manual_curation CDS 19219548 19219665 . + 2 Parent=GSCOCT00001423001 | |
| 46387 chr10 manual_curation CDS 19220675 19220938 . + 0 Parent=GSCOCT00001423001 | |
| 46388 chr10 manual_curation gene 19228496 19234715 . + . ID=GSCOCG00001424001;Name=Cc10_g11560 | |
| 46389 chr10 manual_curation mRNA 19228496 19234715 . + . ID=GSCOCT00001424001;Parent=GSCOCG00001424001;Name=Cc10_g11560 | |
| 46390 chr10 manual_curation polypeptide 19228723 19234715 . + . ID=GSCOCP00001424001;Dbxref=TAIR:AT5G35320.1,TrEMBL:A5B1X8,TrEMBL:B9HAL9,TrEMBL:B9IN06;Derives_from=GSCOCT00001424001;Name=Cc10_g11560;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001424001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=join(159940..160023%2C160350..160605%2C165640..165932);owner=coffea | |
| 46391 chr10 manual_curation exon 19228496 19228806 . + . Parent=GSCOCT00001424001 | |
| 46392 chr10 manual_curation exon 19229133 19229388 . + . Parent=GSCOCT00001424001 | |
| 46393 chr10 manual_curation exon 19234423 19234715 . + . Parent=GSCOCT00001424001 | |
| 46394 chr10 manual_curation CDS 19228723 19228806 . + 0 Parent=GSCOCT00001424001 | |
| 46395 chr10 manual_curation CDS 19229133 19229388 . + 0 Parent=GSCOCT00001424001 | |
| 46396 chr10 manual_curation CDS 19234423 19234715 . + 1 Parent=GSCOCT00001424001 | |
| 46397 chr10 manual_curation gene 19285259 19288241 . + . ID=GSCOCG00001425001;Name=Cc10_g11570 | |
| 46398 chr10 manual_curation mRNA 19285259 19288241 . + . ID=GSCOCT00001425001;Parent=GSCOCG00001425001;Name=Cc10_g11570 | |
| 46399 chr10 manual_curation polypeptide 19285599 19288241 . + . ID=GSCOCP00001425001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,PFAM:PF00560,SMART:SM00369,SwissProt:P0CB16,SwissProt:P26337,SwissProt:Q8VZC7,TAIR:AT4G16890.1,TAIR:AT4G19050.1,TAIR:AT5G45510.1,TrEMBL:B9GZV0,TrEMBL:B9S1J4,TrEMBL:D7MGV6;Derives_from=GSCOCT00001425001;Name=Cc10_g11570;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance protein At4g19050,CC_functional_completeness:complete,CC_gene:At4g19050,CC_gene:At5g45510,CC_gene:ESAG8C;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001425001~ Putative disease resistance protein At4g19050~ At4g19050~ complete;original_location=join(216816..217299%2C217396..219458);owner=coffea | |
| 46400 chr10 manual_curation exon 19285259 19286082 . + . Parent=GSCOCT00001425001 | |
| 46401 chr10 manual_curation exon 19286179 19288241 . + . Parent=GSCOCT00001425001 | |
| 46402 chr10 manual_curation CDS 19285599 19286082 . + 0 Parent=GSCOCT00001425001 | |
| 46403 chr10 manual_curation CDS 19286179 19288241 . + 1 Parent=GSCOCT00001425001 | |
| 46404 chr10 manual_curation gene 19458356 19462969 . + . ID=GSCOCG00001428001;Name=Cc10_g11580 | |
| 46405 chr10 manual_curation mRNA 19458356 19462969 . + . ID=GSCOCT00001428001;Parent=GSCOCG00001428001;Name=Cc10_g11580 | |
| 46406 chr10 manual_curation polypeptide 19460571 19462484 . + . ID=GSCOCP00001428001;Dbxref=InterPro:IPR019013,PFAM:PF09446,TAIR:AT1G05780.1,TAIR:AT2G31710.1,TrEMBL:B9MUL9,TrEMBL:F6HFT6,TrEMBL:I1N5U1;Derives_from=GSCOCT00001428001;Name=Cc10_g11580;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Vacuolar ATPase assembly integral membrane protein VMA21-like domain,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001428001~ Vacuolar ATPase assembly integral membrane protein VMA21-like domain~ unknown_gene~ complete;original_location=join(391788..391884%2C393478..393701);owner=coffea | |
| 46407 chr10 manual_curation exon 19458356 19458613 . + . Parent=GSCOCT00001428001 | |
| 46408 chr10 manual_curation exon 19460559 19460667 . + . Parent=GSCOCT00001428001 | |
| 46409 chr10 manual_curation exon 19462261 19462969 . + . Parent=GSCOCT00001428001 | |
| 46410 chr10 manual_curation CDS 19460571 19460667 . + 0 Parent=GSCOCT00001428001 | |
| 46411 chr10 manual_curation CDS 19462261 19462484 . + 1 Parent=GSCOCT00001428001 | |
| 46412 chr10 manual_curation gene 19465393 19474791 . + . ID=GSCOCG00001429001;Name=Cc10_g11590 | |
| 46413 chr10 manual_curation mRNA 19465393 19474791 . + . ID=GSCOCT00001429001;Parent=GSCOCG00001429001;Name=Cc10_g11590 | |
| 46414 chr10 manual_curation polypeptide 19465661 19473863 . + . ID=GSCOCP00001429001;Dbxref=InterPro:IPR002646,PFAM:PF01743,SwissProt:P21269,SwissProt:Q9P4S5,SwissProt:Q9Y7U9,TAIR:AT1G22660.1,TrEMBL:B9MW94,TrEMBL:B9T6L0,TrEMBL:D7SRM1;Derives_from=GSCOCT00001429001;Name=Cc10_g11590;Ontology_term=CC_evidence_code:ISS,GO:0003723,GO:0006396,GO:0016779,CC_EC_number:2.7.7.25,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:CCA1,CC_gene:SPCC645.10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001429001~ Hypothetical protein~ CCA1~ missing_functional_completeness;original_location=join(396878..397054%2C397633..397763%2C399735..399852%2C400805..400857%2C401203..401252%2C401356..401454%2C404809..405080);owner=coffea | |
| 46415 chr10 manual_curation exon 19474376 19474791 . + . Parent=GSCOCT00001429001 | |
| 46416 chr10 manual_curation exon 19465393 19465837 . + . Parent=GSCOCT00001429001 | |
| 46417 chr10 manual_curation exon 19466416 19466546 . + . Parent=GSCOCT00001429001 | |
| 46418 chr10 manual_curation exon 19468518 19468635 . + . Parent=GSCOCT00001429001 | |
| 46419 chr10 manual_curation exon 19469588 19469640 . + . Parent=GSCOCT00001429001 | |
| 46420 chr10 manual_curation exon 19469986 19470035 . + . Parent=GSCOCT00001429001 | |
| 46421 chr10 manual_curation exon 19470139 19470237 . + . Parent=GSCOCT00001429001 | |
| 46422 chr10 manual_curation exon 19473592 19474148 . + . Parent=GSCOCT00001429001 | |
| 46423 chr10 manual_curation CDS 19465661 19465837 . + 0 Parent=GSCOCT00001429001 | |
| 46424 chr10 manual_curation CDS 19466416 19466546 . + 0 Parent=GSCOCT00001429001 | |
| 46425 chr10 manual_curation CDS 19468518 19468635 . + 2 Parent=GSCOCT00001429001 | |
| 46426 chr10 manual_curation CDS 19469588 19469640 . + 0 Parent=GSCOCT00001429001 | |
| 46427 chr10 manual_curation CDS 19469986 19470035 . + 2 Parent=GSCOCT00001429001 | |
| 46428 chr10 manual_curation CDS 19470139 19470237 . + 1 Parent=GSCOCT00001429001 | |
| 46429 chr10 manual_curation CDS 19473592 19473863 . + 1 Parent=GSCOCT00001429001 | |
| 46430 chr10 manual_curation gene 19477670 19485925 . + . ID=GSCOCG00001430001;Name=Cc10_g11600 | |
| 46431 chr10 manual_curation mRNA 19477670 19485925 . + . ID=GSCOCT00001430001;Parent=GSCOCG00001430001;Name=Cc10_g11600 | |
| 46432 chr10 manual_curation polypeptide 19477670 19485471 . + . ID=GSCOCP00001430001;Dbxref=TAIR:AT1G22660.1,TrEMBL:B9T6L0,TrEMBL:D7SRM1,TrEMBL:I1NH95;Derives_from=GSCOCT00001430001;Name=Cc10_g11600;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Polynucleotide adenylyltransferase family protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001430001~ Putative Polynucleotide adenylyltransferase family protein~ unknown_gene~ fragment;original_location=join(408887..409003%2C409142..409269%2C411070..411133%2C411742..411825%2C412245..412307%2C412698..412842%2C414180..414335%2C416402..416499%2C416584..416688);owner=coffea | |
| 46433 chr10 manual_curation exon 19477670 19477786 . + . Parent=GSCOCT00001430001 | |
| 46434 chr10 manual_curation exon 19477925 19478052 . + . Parent=GSCOCT00001430001 | |
| 46435 chr10 manual_curation exon 19479853 19479916 . + . Parent=GSCOCT00001430001 | |
| 46436 chr10 manual_curation exon 19480525 19480608 . + . Parent=GSCOCT00001430001 | |
| 46437 chr10 manual_curation exon 19481028 19481090 . + . Parent=GSCOCT00001430001 | |
| 46438 chr10 manual_curation exon 19481481 19481625 . + . Parent=GSCOCT00001430001 | |
| 46439 chr10 manual_curation exon 19482963 19483118 . + . Parent=GSCOCT00001430001 | |
| 46440 chr10 manual_curation exon 19485185 19485282 . + . Parent=GSCOCT00001430001 | |
| 46441 chr10 manual_curation exon 19485367 19485925 . + . Parent=GSCOCT00001430001 | |
| 46442 chr10 manual_curation CDS 19477670 19477786 . + 0 Parent=GSCOCT00001430001 | |
| 46443 chr10 manual_curation CDS 19477925 19478052 . + 0 Parent=GSCOCT00001430001 | |
| 46444 chr10 manual_curation CDS 19479853 19479916 . + 2 Parent=GSCOCT00001430001 | |
| 46445 chr10 manual_curation CDS 19480525 19480608 . + 0 Parent=GSCOCT00001430001 | |
| 46446 chr10 manual_curation CDS 19481028 19481090 . + 0 Parent=GSCOCT00001430001 | |
| 46447 chr10 manual_curation CDS 19481481 19481625 . + 0 Parent=GSCOCT00001430001 | |
| 46448 chr10 manual_curation CDS 19482963 19483118 . + 1 Parent=GSCOCT00001430001 | |
| 46449 chr10 manual_curation CDS 19485185 19485282 . + 1 Parent=GSCOCT00001430001 | |
| 46450 chr10 manual_curation CDS 19485367 19485471 . + 0 Parent=GSCOCT00001430001 | |
| 46451 chr10 manual_curation gene 19487861 19488464 . + . ID=GSCOCG00001431001;Name=Cc10_g11610 | |
| 46452 chr10 manual_curation mRNA 19487861 19488464 . + . ID=GSCOCT00001431001;Parent=GSCOCG00001431001;Name=Cc10_g11610 | |
| 46453 chr10 manual_curation polypeptide 19487861 19488464 . + . ID=GSCOCP00001431001;Dbxref=InterPro:IPR001023,InterPro:IPR013126,PANTHER:PTHR19375,PFAM:PF00012,SwissProt:Q02028,SwissProt:Q08080,SwissProt:Q9LTX9,TAIR:AT4G24280.1,TAIR:AT5G49910.1,TrEMBL:A5AT21,TrEMBL:F6I3V5,TrEMBL:I1MJU7;Derives_from=GSCOCT00001431001;Name=Cc10_g11610;Ontology_term=CC_evidence_code:ISS,GO:0005524,CC_EC_number:missing_EC_number,PRODUCT:Heat shock 70 kDa protein 7%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:CHSP70,CC_gene:HSP70,CC_gene:HSP70-7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001431001~ Heat shock 70 kDa protein 7%2C chloroplastic~ CHSP70~ fragment;original_location=join(419078..419165%2C419439..419488%2C419568..419681);owner=coffea | |
| 46454 chr10 manual_curation exon 19487861 19487948 . + . Parent=GSCOCT00001431001 | |
| 46455 chr10 manual_curation exon 19488222 19488271 . + . Parent=GSCOCT00001431001 | |
| 46456 chr10 manual_curation exon 19488351 19488464 . + . Parent=GSCOCT00001431001 | |
| 46457 chr10 manual_curation CDS 19487861 19487948 . + 0 Parent=GSCOCT00001431001 | |
| 46458 chr10 manual_curation CDS 19488222 19488271 . + 1 Parent=GSCOCT00001431001 | |
| 46459 chr10 manual_curation CDS 19488351 19488464 . + 0 Parent=GSCOCT00001431001 | |
| 46460 chr10 manual_curation gene 19528443 19529228 . + . ID=GSCOCG00001432001;Name=Cc10_g11620 | |
| 46461 chr10 manual_curation mRNA 19528443 19529228 . + . ID=GSCOCT00001432001;Parent=GSCOCG00001432001;Name=Cc10_g11620 | |
| 46462 chr10 manual_curation polypeptide 19528443 19529228 . + . ID=GSCOCP00001432001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR012677,PFAM:PF00076,PROFILE:PS50102,TAIR:AT2G35410.1,TrEMBL:A9PK26,TrEMBL:B9SNU9,TrEMBL:F6HT84;Derives_from=GSCOCT00001432001;Name=Cc10_g11620;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001432001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(459660..459767%2C459948..460043%2C460371..460445);owner=coffea | |
| 46463 chr10 manual_curation exon 19528443 19528550 . + . Parent=GSCOCT00001432001 | |
| 46464 chr10 manual_curation exon 19528731 19528826 . + . Parent=GSCOCT00001432001 | |
| 46465 chr10 manual_curation exon 19529154 19529228 . + . Parent=GSCOCT00001432001 | |
| 46466 chr10 manual_curation CDS 19528443 19528550 . + 0 Parent=GSCOCT00001432001 | |
| 46467 chr10 manual_curation CDS 19528731 19528826 . + 0 Parent=GSCOCT00001432001 | |
| 46468 chr10 manual_curation CDS 19529154 19529228 . + 0 Parent=GSCOCT00001432001 | |
| 46469 chr10 manual_curation gene 19552666 19556549 . + . ID=GSCOCG00001434001;Name=Cc10_g11630 | |
| 46470 chr10 manual_curation mRNA 19552666 19556549 . + . ID=GSCOCT00001434001;Parent=GSCOCG00001434001;Name=Cc10_g11630 | |
| 46471 chr10 manual_curation polypeptide 19552666 19556382 . + . ID=GSCOCP00001434001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q6L400,SwissProt:Q6L403,SwissProt:Q8W1E0,TAIR:AT1G50180.1,TAIR:AT3G46530.1,TAIR:AT3G46730.1,TrEMBL:Q96485,TrEMBL:Q9LLD0,TrEMBL:Q9LLD4;Derives_from=GSCOCT00001434001;Name=Cc10_g11630;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative Late blight resistance protein R1-A,CC_functional_completeness:complete,CC_gene:R1A,CC_gene:R1B-16,CC_gene:R1B-17;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001434001~ Putative Late blight resistance protein R1-A~ R1A~ complete;original_location=483883..487599;owner=coffea | |
| 46472 chr10 manual_curation exon 19552666 19556549 . + . Parent=GSCOCT00001434001 | |
| 46473 chr10 manual_curation CDS 19552666 19556382 . + 0 Parent=GSCOCT00001434001 | |
| 46474 chr10 manual_curation gene 19625444 19627298 . - . ID=GSCOCG00001438001;Name=Cc10_g11640 | |
| 46475 chr10 manual_curation mRNA 19625444 19627298 . - . ID=GSCOCT00001438001;Parent=GSCOCG00001438001;Name=Cc10_g11640 | |
| 46476 chr10 manual_curation polypeptide 19625726 19627298 . - . ID=GSCOCP00001438001;Dbxref=GENE3D:G3DSA:3.40.630.30,InterPro:IPR000182,InterPro:IPR016181,InterPro:IPR022610,PFAM:PF00583,PROFILE:PS51186,SUPERFAMILY:SSF55729,TAIR:AT1G72030.1,TrEMBL:A5AT20,TrEMBL:C6TDG9,TrEMBL:I1KWA3;Derives_from=GSCOCT00001438001;Name=Cc10_g11640;Ontology_term=CC_evidence_code:ISS,GO:0008080,GO:0008152,CC_EC_number:missing_EC_number,PRODUCT:Acyl-CoA N-acyltransferases (NAT) superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001438001~ Acyl-CoA N-acyltransferases (NAT) superfamily protein~ unknown_gene~ complete;original_location=complement(join(558084..558515%2C557664..557716%2C557262..557432%2C556943..557165));owner=coffea | |
| 46477 chr10 manual_curation exon 19625444 19625948 . - . Parent=GSCOCT00001438001 | |
| 46478 chr10 manual_curation exon 19626045 19626215 . - . Parent=GSCOCT00001438001 | |
| 46479 chr10 manual_curation exon 19626447 19626499 . - . Parent=GSCOCT00001438001 | |
| 46480 chr10 manual_curation exon 19626867 19627298 . - . Parent=GSCOCT00001438001 | |
| 46481 chr10 manual_curation CDS 19625726 19625948 . - 2 Parent=GSCOCT00001438001 | |
| 46482 chr10 manual_curation CDS 19626045 19626215 . - 2 Parent=GSCOCT00001438001 | |
| 46483 chr10 manual_curation CDS 19626447 19626499 . - 0 Parent=GSCOCT00001438001 | |
| 46484 chr10 manual_curation CDS 19626867 19627298 . - 0 Parent=GSCOCT00001438001 | |
| 46485 chr10 manual_curation gene 19628388 19632212 . - . ID=GSCOCG00001439001;Name=Cc10_g11650 | |
| 46486 chr10 manual_curation mRNA 19628388 19632212 . - . ID=GSCOCT00001439001;Parent=GSCOCG00001439001;Name=Cc10_g11650 | |
| 46487 chr10 manual_curation polypeptide 19628388 19632212 . - . ID=GSCOCP00001439001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q6L3Z7,SwissProt:Q6L403,SwissProt:Q8W1E0,TAIR:AT1G50180.1,TAIR:AT3G46710.1,TAIR:AT5G35450.1,TrEMBL:Q6L432,TrEMBL:Q9LLD0,TrEMBL:Q9LLD4;Derives_from=GSCOCT00001439001;Name=Cc10_g11650;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1B-14,CC_functional_completeness:complete,CC_gene:R1B-14,CC_gene:R1B-17,CC_gene:R1A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001439001~ Putative late blight resistance protein homolog R1B-14~ R1B-14~ complete;original_location=complement(join(560007..563429%2C559605..559925));owner=coffea | |
| 46488 chr10 manual_curation exon 19628388 19628708 . - . Parent=GSCOCT00001439001 | |
| 46489 chr10 manual_curation exon 19628790 19632212 . - . Parent=GSCOCT00001439001 | |
| 46490 chr10 manual_curation CDS 19628388 19628708 . - 0 Parent=GSCOCT00001439001 | |
| 46491 chr10 manual_curation CDS 19628790 19632212 . - 0 Parent=GSCOCT00001439001 | |
| 46492 chr10 manual_curation gene 19742511 19743919 . + . ID=GSCOCG00001441001;Name=Cc10_g11660 | |
| 46493 chr10 manual_curation mRNA 19742511 19743919 . + . ID=GSCOCT00001441001;Parent=GSCOCG00001441001;Name=Cc10_g11660 | |
| 46494 chr10 manual_curation polypeptide 19742867 19743919 . + . ID=GSCOCP00001441001;Dbxref=InterPro:IPR001841,PROFILE:PS50089,SMART:SM00184,SwissProt:Q3TEL6,SwissProt:Q6INH1,SwissProt:Q96PX1,TAIR:AT3G09770.1,TAIR:AT3G53410.1,TAIR:AT5G03200.1,TrEMBL:A5B9W9,TrEMBL:B9MTB3,TrEMBL:F6HR19;Derives_from=GSCOCT00001441001;Name=Cc10_g11660;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:RING/U-box superfamily protein,CC_functional_completeness:complete,CC_gene:Rnf157,CC_gene:RNF157,CC_gene:rnf157;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001441001~ RING/U-box superfamily protein~ Rnf157~ complete;original_location=674084..675136;owner=coffea | |
| 46495 chr10 manual_curation exon 19742511 19743919 . + . Parent=GSCOCT00001441001 | |
| 46496 chr10 manual_curation CDS 19742867 19743919 . + 0 Parent=GSCOCT00001441001 | |
| 46497 chr10 manual_curation gene 19753713 19754409 . + . ID=GSCOCG00001442001;Name=Cc10_g11670 | |
| 46498 chr10 manual_curation mRNA 19753713 19754409 . + . ID=GSCOCT00001442001;Parent=GSCOCG00001442001;Name=Cc10_g11670 | |
| 46499 chr10 manual_curation polypeptide 19753713 19754409 . + . ID=GSCOCP00001442001;Dbxref=InterPro:IPR001509,InterPro:IPR005886,PANTHER:PTHR10366:SF39,PFAM:PF01370,SwissProt:Q8H0B2,SwissProt:Q8H930,SwissProt:Q9SA77,TAIR:AT1G30620.1,TAIR:AT4G20460.1,TAIR:AT5G44480.1,TrEMBL:B9GK13,TrEMBL:B9SV82,TrEMBL:D7TKQ9;Derives_from=GSCOCT00001442001;Name=Cc10_g11670;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0003978,GO:0006012,GO:0044237,GO:0050662,CC_EC_number:5.1.3.5,PRODUCT:Probable UDP-arabinose 4-epimerase 1,CC_functional_completeness:fragment,CC_gene:UEL-1,CC_gene:UEL-3,CC_gene:MUR4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001442001~ Probable UDP-arabinose 4-epimerase 1~ UEL-1~ fragment;original_location=join(684930..684940%2C685180..685355%2C685415..685626);owner=coffea | |
| 46500 chr10 manual_curation exon 19753713 19753723 . + . Parent=GSCOCT00001442001 | |
| 46501 chr10 manual_curation exon 19753963 19754138 . + . Parent=GSCOCT00001442001 | |
| 46502 chr10 manual_curation exon 19754198 19754409 . + . Parent=GSCOCT00001442001 | |
| 46503 chr10 manual_curation CDS 19753713 19753723 . + 0 Parent=GSCOCT00001442001 | |
| 46504 chr10 manual_curation CDS 19753963 19754138 . + 2 Parent=GSCOCT00001442001 | |
| 46505 chr10 manual_curation CDS 19754198 19754409 . + 1 Parent=GSCOCT00001442001 | |
| 46506 chr10 manual_curation gene 19792080 19792292 . - . ID=GSCOCG00003296001;Name=Cc10_g11680 | |
| 46507 chr10 manual_curation mRNA 19792080 19792292 . - . ID=GSCOCT00003296001;Parent=GSCOCG00003296001;Name=Cc10_g11680 | |
| 46508 chr10 manual_curation polypeptide 19792080 19792292 . - . ID=GSCOCP00003296001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR012677,InterPro:IPR012678,InterPro:IPR013025,PFAM:PF00276,SUPERFAMILY:SSF54189,SwissProt:P62750,SwissProt:P62751,SwissProt:P62752;Derives_from=GSCOCT00003296001;Name=Cc10_g11680;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:60S ribosomal protein L23a,CC_functional_completeness:fragment,CC_gene:Rpl23a,CC_gene:RPL23A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00003296001~ 60S ribosomal protein L23a~ Rpl23a~ fragment;original_location=complement(24164..24376);owner=coffea | |
| 46509 chr10 manual_curation exon 19792080 19792292 . - . Parent=GSCOCT00003296001 | |
| 46510 chr10 manual_curation CDS 19792080 19792292 . - 0 Parent=GSCOCT00003296001 | |
| 46511 chr10 manual_curation gene 20028819 20029124 . - . ID=GSCOCG00003302001;Name=Cc10_g11690 | |
| 46512 chr10 manual_curation mRNA 20028819 20029124 . - . ID=GSCOCT00003302001;Parent=GSCOCG00003302001;Name=Cc10_g11690 | |
| 46513 chr10 manual_curation polypeptide 20028819 20029124 . - . ID=GSCOCP00003302001;Dbxref=InterPro:IPR000626,InterPro:IPR019955,InterPro:IPR019956,PFAM:PF00240,PRINTS:PR00348,PROFILE:PS50053,SwissProt:P27923,SwissProt:P42739,SwissProt:P59233,TAIR:AT2G47110.1,TAIR:AT3G62250.1,TAIR:AT5G03240.1,TrEMBL:B6TSG5,TrEMBL:F4YBD5,TrEMBL:Q41753;Derives_from=GSCOCT00003302001;Name=Cc10_g11690;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Polyubiquitin (Fragment),CC_functional_completeness:fragment,CC_gene:RPS27AC,CC_gene:UBF9;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00003302001~ Polyubiquitin (Fragment)~ RPS27AC~ fragment;original_location=complement(260903..261208);owner=coffea | |
| 46514 chr10 manual_curation exon 20028819 20029124 . - . Parent=GSCOCT00003302001 | |
| 46515 chr10 manual_curation CDS 20028819 20029124 . - 0 Parent=GSCOCT00003302001 | |
| 46516 chr10 manual_curation gene 20097255 20097905 . + . ID=GSCOCG00007293001;Name=Cc10_g11700 | |
| 46517 chr10 manual_curation mRNA 20097255 20097905 . + . ID=GSCOCT00007293001;Parent=GSCOCG00007293001;Name=Cc10_g11700 | |
| 46518 chr10 manual_curation polypeptide 20097255 20097905 . + . ID=GSCOCP00007293001;Dbxref=InterPro:IPR002160,InterPro:IPR011065,PFAM:PF00197,PRINTS:PR00291,PROSITE:PS00283,SMART:SM00452,SUPERFAMILY:SSF50386,SwissProt:P13087,SwissProt:P32765,SwissProt:Q41015,TAIR:AT1G17860.1,TAIR:AT1G73260.1,TAIR:AT1G73325.1,TrEMBL:A0FGS5,TrEMBL:D3W0X4,TrEMBL:F2VJF4;Derives_from=GSCOCT00007293001;Name=Cc10_g11700;Ontology_term=CC_evidence_code:ISS,GO:0004866,CC_EC_number:missing_EC_number,PRODUCT:Putative Miraculin,CC_functional_completeness:complete,CC_gene:ASP,CC_gene:PIP20-1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00007293001~ Putative Miraculin~ ASP~ complete;original_location=52886..53536;owner=coffea | |
| 46519 chr10 manual_curation exon 20097255 20097905 . + . Parent=GSCOCT00007293001 | |
| 46520 chr10 manual_curation CDS 20097255 20097905 . + 0 Parent=GSCOCT00007293001 | |
| 46521 chr10 manual_curation gene 20232377 20235243 . + . ID=GSCOCG00007298001;Name=Cc10_g11710 | |
| 46522 chr10 manual_curation mRNA 20232377 20235243 . + . ID=GSCOCT00007298001;Parent=GSCOCG00007298001;Name=Cc10_g11710 | |
| 46523 chr10 manual_curation polypeptide 20232377 20235217 . + . ID=GSCOCP00007298001;Dbxref=SwissProt:P59271,SwissProt:P68203,SwissProt:P69061,TAIR:AT1G23410.1,TAIR:AT2G47110.1,TAIR:AT3G62250.1,TrEMBL:B7FGN8,TrEMBL:G7K080,TrEMBL:G7L814;Derives_from=GSCOCT00007298001;Name=Cc10_g11710;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:ubi3,CC_gene:RPS27AA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00007298001~ Hypothetical protein~ ubi3~ missing_functional_completeness;original_location=join(188008..188070%2C188142..188315%2C189746..189907%2C190807..190848);owner=coffea | |
| 46524 chr10 manual_curation exon 20232377 20232439 . + . Parent=GSCOCT00007298001 | |
| 46525 chr10 manual_curation exon 20232511 20232684 . + . Parent=GSCOCT00007298001 | |
| 46526 chr10 manual_curation exon 20234115 20234276 . + . Parent=GSCOCT00007298001 | |
| 46527 chr10 manual_curation exon 20235176 20235243 . + . Parent=GSCOCT00007298001 | |
| 46528 chr10 manual_curation CDS 20232377 20232439 . + 0 Parent=GSCOCT00007298001 | |
| 46529 chr10 manual_curation CDS 20232511 20232684 . + 0 Parent=GSCOCT00007298001 | |
| 46530 chr10 manual_curation CDS 20234115 20234276 . + 0 Parent=GSCOCT00007298001 | |
| 46531 chr10 manual_curation CDS 20235176 20235217 . + 0 Parent=GSCOCT00007298001 | |
| 46532 chr10 manual_curation gene 20248176 20248832 . + . ID=GSCOCG00007300001;Name=Cc10_g11720 | |
| 46533 chr10 manual_curation mRNA 20248176 20248832 . + . ID=GSCOCT00007300001;Parent=GSCOCG00007300001;Name=Cc10_g11720 | |
| 46534 chr10 manual_curation polypeptide 20248176 20248832 . + . ID=GSCOCP00007300001;Dbxref=InterPro:IPR002160,InterPro:IPR011065,PFAM:PF00197,PRINTS:PR00291,PROSITE:PS00283,SMART:SM00452,SUPERFAMILY:SSF50386,SwissProt:P13087,SwissProt:P32765,SwissProt:P80691,TAIR:AT1G17860.1,TAIR:AT1G73260.1,TAIR:AT1G73325.1,TrEMBL:A0FGS5,TrEMBL:Q4W164,TrEMBL:Q4W169;Derives_from=GSCOCT00007300001;Name=Cc10_g11720;Ontology_term=CC_evidence_code:ISS,GO:0004866,CC_EC_number:missing_EC_number,PRODUCT:Putative Miraculin,CC_functional_completeness:complete,CC_gene:ASP;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00007300001~ Putative Miraculin~ ASP~ complete;original_location=203807..204463;owner=coffea | |
| 46535 chr10 manual_curation exon 20248176 20248832 . + . Parent=GSCOCT00007300001 | |
| 46536 chr10 manual_curation CDS 20248176 20248832 . + 0 Parent=GSCOCT00007300001 | |
| 46537 chr10 manual_curation gene 20310736 20325283 . + . ID=GSCOCG00031844001;Name=Cc10_g11730 | |
| 46538 chr10 manual_curation mRNA 20310736 20325283 . + . ID=GSCOCT00031844001;Parent=GSCOCG00031844001;Name=Cc10_g11730 | |
| 46539 chr10 manual_curation polypeptide 20310736 20325283 . + . ID=GSCOCP00031844001;Dbxref=InterPro:IPR016024,SUPERFAMILY:SSF48371,SwissProt:A1L1F4,SwissProt:Q29RF7,SwissProt:Q5F3V3,TAIR:AT1G77600.3,TAIR:AT4G31880.1,TAIR:AT5G47690.3,TrEMBL:B2ZAQ0,TrEMBL:B9RJ83,TrEMBL:D7KUK8;Derives_from=GSCOCT00031844001;Name=Cc10_g11730;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:Putative Sister chromatid cohesion protein PDS5 homolog A,CC_functional_completeness:fragment,CC_gene:PDS5A,CC_gene:pds5a;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031844001~ Putative Sister chromatid cohesion protein PDS5 homolog A~ PDS5A~ fragment;original_location=join(41096..41326%2C41466..41647%2C43172..43340%2C44568..44789%2C44998..45214%2C45333..45478%2C45595..45743%2C45835..45984%2C46057..46105%2C48138..48317%2C52630..52812%2C54370..54512%2C55442..55643);owner=coffea | |
| 46540 chr10 manual_curation exon 20310736 20310966 . + . Parent=GSCOCT00031844001 | |
| 46541 chr10 manual_curation exon 20311106 20311287 . + . Parent=GSCOCT00031844001 | |
| 46542 chr10 manual_curation exon 20312812 20312980 . + . Parent=GSCOCT00031844001 | |
| 46543 chr10 manual_curation exon 20314208 20314429 . + . Parent=GSCOCT00031844001 | |
| 46544 chr10 manual_curation exon 20314638 20314854 . + . Parent=GSCOCT00031844001 | |
| 46545 chr10 manual_curation exon 20314973 20315118 . + . Parent=GSCOCT00031844001 | |
| 46546 chr10 manual_curation exon 20315235 20315383 . + . Parent=GSCOCT00031844001 | |
| 46547 chr10 manual_curation exon 20315475 20315624 . + . Parent=GSCOCT00031844001 | |
| 46548 chr10 manual_curation exon 20315697 20315745 . + . Parent=GSCOCT00031844001 | |
| 46549 chr10 manual_curation exon 20317778 20317957 . + . Parent=GSCOCT00031844001 | |
| 46550 chr10 manual_curation exon 20322270 20322452 . + . Parent=GSCOCT00031844001 | |
| 46551 chr10 manual_curation exon 20324010 20324152 . + . Parent=GSCOCT00031844001 | |
| 46552 chr10 manual_curation exon 20325082 20325283 . + . Parent=GSCOCT00031844001 | |
| 46553 chr10 manual_curation CDS 20310736 20310966 . + 0 Parent=GSCOCT00031844001 | |
| 46554 chr10 manual_curation CDS 20311106 20311287 . + 0 Parent=GSCOCT00031844001 | |
| 46555 chr10 manual_curation CDS 20312812 20312980 . + 2 Parent=GSCOCT00031844001 | |
| 46556 chr10 manual_curation CDS 20314208 20314429 . + 0 Parent=GSCOCT00031844001 | |
| 46557 chr10 manual_curation CDS 20314638 20314854 . + 0 Parent=GSCOCT00031844001 | |
| 46558 chr10 manual_curation CDS 20314973 20315118 . + 1 Parent=GSCOCT00031844001 | |
| 46559 chr10 manual_curation CDS 20315235 20315383 . + 0 Parent=GSCOCT00031844001 | |
| 46560 chr10 manual_curation CDS 20315475 20315624 . + 2 Parent=GSCOCT00031844001 | |
| 46561 chr10 manual_curation CDS 20315697 20315745 . + 2 Parent=GSCOCT00031844001 | |
| 46562 chr10 manual_curation CDS 20317778 20317957 . + 0 Parent=GSCOCT00031844001 | |
| 46563 chr10 manual_curation CDS 20322270 20322452 . + 0 Parent=GSCOCT00031844001 | |
| 46564 chr10 manual_curation CDS 20324010 20324152 . + 0 Parent=GSCOCT00031844001 | |
| 46565 chr10 manual_curation CDS 20325082 20325283 . + 2 Parent=GSCOCT00031844001 | |
| 46566 chr10 manual_curation gene 20327941 20331306 . + . ID=GSCOCG00031845001;Name=Cc10_g11740 | |
| 46567 chr10 manual_curation mRNA 20327941 20331306 . + . ID=GSCOCT00031845001;Parent=GSCOCG00031845001;Name=Cc10_g11740 | |
| 46568 chr10 manual_curation polypeptide 20328294 20331306 . + . ID=GSCOCP00031845001;Derives_from=GSCOCT00031845001;Name=Cc10_g11740;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031845001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(58654..58728%2C58849..58916%2C61534..61666);owner=coffea | |
| 46569 chr10 manual_curation exon 20327941 20328368 . + . Parent=GSCOCT00031845001 | |
| 46570 chr10 manual_curation exon 20328489 20328556 . + . Parent=GSCOCT00031845001 | |
| 46571 chr10 manual_curation exon 20331174 20331306 . + . Parent=GSCOCT00031845001 | |
| 46572 chr10 manual_curation CDS 20328294 20328368 . + 0 Parent=GSCOCT00031845001 | |
| 46573 chr10 manual_curation CDS 20328489 20328556 . + 0 Parent=GSCOCT00031845001 | |
| 46574 chr10 manual_curation CDS 20331174 20331306 . + 2 Parent=GSCOCT00031845001 | |
| 46575 chr10 manual_curation gene 20332091 20333926 . + . ID=GSCOCG00031846001;Name=Cc10_g11750 | |
| 46576 chr10 manual_curation mRNA 20332091 20333926 . + . ID=GSCOCT00031846001;Parent=GSCOCG00031846001;Name=Cc10_g11750 | |
| 46577 chr10 manual_curation polypeptide 20332755 20333926 . + . ID=GSCOCP00031846001;Dbxref=GENE3D:G3DSA:2.60.40.420,InterPro:IPR002355,InterPro:IPR008972,InterPro:IPR011706,PFAM:PF07731,PROSITE:PS00080,SUPERFAMILY:SSF49503,SwissProt:Q0DHL2,SwissProt:Q5N9X2,SwissProt:Q9FJD5,TAIR:AT2G29130.1,TAIR:AT5G03260.1,TAIR:AT5G60020.1,TrEMBL:B9HPE5,TrEMBL:C5YZ93,TrEMBL:I1HIS1;Derives_from=GSCOCT00031846001;Name=Cc10_g11750;Ontology_term=CC_evidence_code:ISS,GO:0005507,GO:0016491,GO:0055114,CC_EC_number:1.10.3.3,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:LAC17,CC_gene:LAC12,CC_gene:LAC4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031846001~ Hypothetical protein~ LAC17~ missing_functional_completeness;original_location=join(63115..63326%2C63832..64022%2C64195..64286);owner=coffea | |
| 46578 chr10 manual_curation exon 20332091 20332966 . + . Parent=GSCOCT00031846001 | |
| 46579 chr10 manual_curation exon 20333472 20333662 . + . Parent=GSCOCT00031846001 | |
| 46580 chr10 manual_curation exon 20333835 20333926 . + . Parent=GSCOCT00031846001 | |
| 46581 chr10 manual_curation CDS 20332755 20332966 . + 0 Parent=GSCOCT00031846001 | |
| 46582 chr10 manual_curation CDS 20333472 20333662 . + 2 Parent=GSCOCT00031846001 | |
| 46583 chr10 manual_curation CDS 20333835 20333926 . + 1 Parent=GSCOCT00031846001 | |
| 46584 chr10 manual_curation gene 20336862 20340353 . + . ID=GSCOCG00031847001;Name=Cc10_g11760 | |
| 46585 chr10 manual_curation mRNA 20336862 20340353 . + . ID=GSCOCT00031847001;Parent=GSCOCG00031847001;Name=Cc10_g11760 | |
| 46586 chr10 manual_curation polypeptide 20336862 20340278 . + . ID=GSCOCP00031847001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SMART:SM00369,SwissProt:C0LGQ5,SwissProt:Q9C9H7,SwissProt:Q9FIZ3,TAIR:AT1G45616.1,TAIR:AT1G47890.1,TAIR:AT2G15080.1,TrEMBL:C4NAS5,TrEMBL:Q6JSK2,TrEMBL:Q93V91;Derives_from=GSCOCT00031847001;Name=Cc10_g11760;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:3.1.3.16,PRODUCT:Putative Receptor-like protein 12,CC_functional_completeness:complete,CC_gene:RLP12,CC_gene:GSO1,CC_gene:GSO2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031847001~ Putative Receptor-like protein 12~ RLP12~ complete;original_location=67222..70638;owner=coffea | |
| 46587 chr10 manual_curation exon 20336862 20340353 . + . Parent=GSCOCT00031847001 | |
| 46588 chr10 manual_curation CDS 20336862 20340278 . + 0 Parent=GSCOCT00031847001 | |
| 46589 chr10 manual_curation gene 20346555 20349159 . - . ID=GSCOCG00031850001;Name=Cc10_g11770 | |
| 46590 chr10 manual_curation mRNA 20346555 20349159 . - . ID=GSCOCT00031850001;Parent=GSCOCG00031850001;Name=Cc10_g11770 | |
| 46591 chr10 manual_curation polypeptide 20346678 20347565 . - . ID=GSCOCP00031850001;Dbxref=TrEMBL:B9HBT1,TrEMBL:D7THL8,TrEMBL:I1KK08;Derives_from=GSCOCT00031850001;Name=Cc10_g11770;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031850001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=complement(join(77301..77925%2C77038..77111));owner=coffea | |
| 46592 chr10 manual_curation exon 20348884 20349159 . - . Parent=GSCOCT00031850001 | |
| 46593 chr10 manual_curation exon 20346555 20346751 . - . Parent=GSCOCT00031850001 | |
| 46594 chr10 manual_curation exon 20346941 20347604 . - . Parent=GSCOCT00031850001 | |
| 46595 chr10 manual_curation CDS 20346678 20346751 . - 1 Parent=GSCOCT00031850001 | |
| 46596 chr10 manual_curation CDS 20346941 20347565 . - 0 Parent=GSCOCT00031850001 | |
| 46597 chr10 manual_curation gene 20470194 20471063 . - . ID=GSCOCG00031854001;Name=Cc10_g11780 | |
| 46598 chr10 manual_curation mRNA 20470194 20471063 . - . ID=GSCOCT00031854001;Parent=GSCOCG00031854001;Name=Cc10_g11780 | |
| 46599 chr10 manual_curation polypeptide 20470194 20471063 . - . ID=GSCOCP00031854001;Dbxref=TAIR:AT3G19895.1,TrEMBL:B9HI63,TrEMBL:B9RPY5,TrEMBL:F6HGH8;Derives_from=GSCOCT00031854001;Name=Cc10_g11780;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:RING/U-box superfamily protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031854001~ RING/U-box superfamily protein~ unknown_gene~ fragment;original_location=complement(join(201339..201423%2C201154..201280%2C200805..200960%2C200554..200713));owner=coffea | |
| 46600 chr10 manual_curation exon 20470194 20470353 . - . Parent=GSCOCT00031854001 | |
| 46601 chr10 manual_curation exon 20470445 20470600 . - . Parent=GSCOCT00031854001 | |
| 46602 chr10 manual_curation exon 20470794 20470920 . - . Parent=GSCOCT00031854001 | |
| 46603 chr10 manual_curation exon 20470979 20471063 . - . Parent=GSCOCT00031854001 | |
| 46604 chr10 manual_curation CDS 20470194 20470353 . - 2 Parent=GSCOCT00031854001 | |
| 46605 chr10 manual_curation CDS 20470445 20470600 . - 2 Parent=GSCOCT00031854001 | |
| 46606 chr10 manual_curation CDS 20470794 20470920 . - 1 Parent=GSCOCT00031854001 | |
| 46607 chr10 manual_curation CDS 20470979 20471063 . - 0 Parent=GSCOCT00031854001 | |
| 46608 chr10 manual_curation gene 20471180 20474580 . - . ID=GSCOCG00031855001;Name=Cc10_g11790 | |
| 46609 chr10 manual_curation mRNA 20471180 20474580 . - . ID=GSCOCT00031855001;Parent=GSCOCG00031855001;Name=Cc10_g11790 | |
| 46610 chr10 manual_curation polypeptide 20471180 20474580 . - . ID=GSCOCP00031855001;Dbxref=GENE3D:G3DSA:3.90.930.12,InterPro:IPR000702,InterPro:IPR002359,InterPro:IPR020040,PANTHER:PTHR11655,PROSITE:PS00700,SUPERFAMILY:SSF56053,SwissProt:P49209,SwissProt:P49210,SwissProt:Q9SZX9,TAIR:AT1G33120.1,TAIR:AT1G33140.1,TAIR:AT4G10450.1,TrEMBL:B9RYZ1,TrEMBL:H9A0G0,TrEMBL:Q38M76;Derives_from=GSCOCT00031855001;Name=Cc10_g11790;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,GO:0019843,CC_EC_number:missing_EC_number,PRODUCT:60S ribosomal protein L9,CC_functional_completeness:fragment,CC_gene:RPL9,CC_gene:RPL9B,CC_gene:RPL9D;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031855001~ 60S ribosomal protein L9~ RPL9~ fragment;original_location=complement(join(204833..204940%2C201540..201635));owner=coffea | |
| 46611 chr10 manual_curation exon 20471180 20471275 . - . Parent=GSCOCT00031855001 | |
| 46612 chr10 manual_curation exon 20474473 20474580 . - . Parent=GSCOCT00031855001 | |
| 46613 chr10 manual_curation CDS 20471180 20471275 . - 0 Parent=GSCOCT00031855001 | |
| 46614 chr10 manual_curation CDS 20474473 20474580 . - 0 Parent=GSCOCT00031855001 | |
| 46615 chr10 manual_curation gene 20475191 20476356 . - . ID=GSCOCG00031856001;Name=Cc10_g11800 | |
| 46616 chr10 manual_curation mRNA 20475191 20476356 . - . ID=GSCOCT00031856001;Parent=GSCOCG00031856001;Name=Cc10_g11800 | |
| 46617 chr10 manual_curation polypeptide 20475191 20476356 . - . ID=GSCOCP00031856001;Dbxref=InterPro:IPR013212,InterPro:IPR015661,PANTHER:PTHR14030,PFAM:PF08311,SMART:SM00777,TAIR:AT5G05510.1,TrEMBL:B9HHU0,TrEMBL:B9SQQ9,TrEMBL:F6HC91;Derives_from=GSCOCT00031856001;Name=Cc10_g11800;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031856001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(206588..206716%2C206331..206438%2C205551..205712));owner=coffea | |
| 46618 chr10 manual_curation exon 20475191 20475352 . - . Parent=GSCOCT00031856001 | |
| 46619 chr10 manual_curation exon 20475971 20476078 . - . Parent=GSCOCT00031856001 | |
| 46620 chr10 manual_curation exon 20476228 20476356 . - . Parent=GSCOCT00031856001 | |
| 46621 chr10 manual_curation CDS 20475191 20475352 . - 0 Parent=GSCOCT00031856001 | |
| 46622 chr10 manual_curation CDS 20475971 20476078 . - 0 Parent=GSCOCT00031856001 | |
| 46623 chr10 manual_curation CDS 20476228 20476356 . - 0 Parent=GSCOCT00031856001 | |
| 46624 chr10 manual_curation gene 20489145 20496266 . - . ID=GSCOCG00031857001;Name=Cc10_g11810 | |
| 46625 chr10 manual_curation mRNA 20489145 20496266 . - . ID=GSCOCT00031857001;Parent=GSCOCG00031857001;Name=Cc10_g11810 | |
| 46626 chr10 manual_curation polypeptide 20489225 20495136 . - . ID=GSCOCP00031857001;Dbxref=GENE3D:G3DSA:1.25.10.10,InterPro:IPR000225,InterPro:IPR001810,InterPro:IPR011989,InterPro:IPR016024,PFAM:PF00514,PFAM:PF00646,PROFILE:PS50176,PROFILE:PS50181,SMART:SM00185,SMART:SM00256,SUPERFAMILY:SSF48371,SwissProt:O22161,SwissProt:O22193,SwissProt:Q9M224,TAIR:AT2G23140.1,TAIR:AT2G44900.1,TAIR:AT3G60350.1,TrEMBL:B9GP58,TrEMBL:B9MVA4,TrEMBL:B9RD12;Derives_from=GSCOCT00031857001;Name=Cc10_g11810;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:Protein ARABIDILLO 1,CC_functional_completeness:complete,CC_gene:FBX5,CC_gene:At3g60350,CC_gene:PUB4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031857001~ Protein ARABIDILLO 1~ FBX5~ complete;original_location=complement(join(224156..225496%2C223816..223974%2C223659..223739%2C223392..223523%2C222566..222693%2C221235..221322%2C220591..220685%2C219585..219714));owner=coffea | |
| 46627 chr10 manual_curation exon 20489145 20489354 . - . Parent=GSCOCT00031857001 | |
| 46628 chr10 manual_curation exon 20490231 20490325 . - . Parent=GSCOCT00031857001 | |
| 46629 chr10 manual_curation exon 20490875 20490962 . - . Parent=GSCOCT00031857001 | |
| 46630 chr10 manual_curation exon 20492206 20492333 . - . Parent=GSCOCT00031857001 | |
| 46631 chr10 manual_curation exon 20493032 20493163 . - . Parent=GSCOCT00031857001 | |
| 46632 chr10 manual_curation exon 20493299 20493379 . - . Parent=GSCOCT00031857001 | |
| 46633 chr10 manual_curation exon 20493456 20493614 . - . Parent=GSCOCT00031857001 | |
| 46634 chr10 manual_curation exon 20493796 20496266 . - . Parent=GSCOCT00031857001 | |
| 46635 chr10 manual_curation CDS 20489225 20489354 . - 2 Parent=GSCOCT00031857001 | |
| 46636 chr10 manual_curation CDS 20490231 20490325 . - 0 Parent=GSCOCT00031857001 | |
| 46637 chr10 manual_curation CDS 20490875 20490962 . - 2 Parent=GSCOCT00031857001 | |
| 46638 chr10 manual_curation CDS 20492206 20492333 . - 0 Parent=GSCOCT00031857001 | |
| 46639 chr10 manual_curation CDS 20493032 20493163 . - 0 Parent=GSCOCT00031857001 | |
| 46640 chr10 manual_curation CDS 20493299 20493379 . - 0 Parent=GSCOCT00031857001 | |
| 46641 chr10 manual_curation CDS 20493456 20493614 . - 0 Parent=GSCOCT00031857001 | |
| 46642 chr10 manual_curation CDS 20493796 20495136 . - 0 Parent=GSCOCT00031857001 | |
| 46643 chr10 manual_curation gene 20557345 20558097 . + . ID=GSCOCG00031858001;Name=Cc10_g11820 | |
| 46644 chr10 manual_curation mRNA 20557345 20558097 . + . ID=GSCOCT00031858001;Parent=GSCOCG00031858001;Name=Cc10_g11820 | |
| 46645 chr10 manual_curation polypeptide 20557837 20558097 . + . ID=GSCOCP00031858001;Derives_from=GSCOCT00031858001;Name=Cc10_g11820;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031858001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=288197..288457;owner=coffea | |
| 46646 chr10 manual_curation exon 20557345 20558097 . + . Parent=GSCOCT00031858001 | |
| 46647 chr10 manual_curation CDS 20557837 20558097 . + 0 Parent=GSCOCT00031858001 | |
| 46648 chr10 manual_curation gene 20600775 20602699 . + . ID=GSCOCG00031860001;Name=Cc10_g11830 | |
| 46649 chr10 manual_curation mRNA 20600775 20602699 . + . ID=GSCOCT00031860001;Parent=GSCOCG00031860001;Name=Cc10_g11830 | |
| 46650 chr10 manual_curation polypeptide 20601723 20601947 . + . ID=GSCOCP00031860001;Derives_from=GSCOCT00031860001;Name=Cc10_g11830;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031860001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=332083..332307;owner=coffea | |
| 46651 chr10 manual_curation exon 20600775 20602699 . + . Parent=GSCOCT00031860001 | |
| 46652 chr10 manual_curation CDS 20601723 20601947 . + 0 Parent=GSCOCT00031860001 | |
| 46653 chr10 manual_curation gene 20605444 20618877 . + . ID=GSCOCG00031861001;Name=Cc10_g11840 | |
| 46654 chr10 manual_curation mRNA 20605444 20618877 . + . ID=GSCOCT00031861001;Parent=GSCOCG00031861001;Name=Cc10_g11840 | |
| 46655 chr10 manual_curation polypeptide 20605558 20618555 . + . ID=GSCOCP00031861001;Dbxref=GENE3D:G3DSA:1.25.40.10,InterPro:IPR001440,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR019734,PFAM:PF00515,PROFILE:PS50005,PROFILE:PS50293,SMART:SM00028,SwissProt:Q80W98,SwissProt:Q8VD33,SwissProt:Q96EQ0,TAIR:AT2G42810.2,TAIR:AT4G08320.2,TAIR:AT4G12400.2,TrEMBL:B9RJ86,TrEMBL:F4JG04,TrEMBL:I1LW70;Derives_from=GSCOCT00031861001;Name=Cc10_g11840;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:Tetratricopeptide repeat (TPR)-like superfamily protein,CC_functional_completeness:complete,CC_gene:Sgtb,CC_gene:SGTB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031861001~ Tetratricopeptide repeat (TPR)-like superfamily protein~ Sgtb~ complete;original_location=join(335918..335990%2C337750..338009%2C339492..339525%2C341354..341490%2C343631..343697%2C343978..344077%2C344876..345039%2C346607..346653%2C346767..346817%2C348556..348915);owner=coffea | |
| 46656 chr10 manual_curation exon 20605444 20605630 . + . Parent=GSCOCT00031861001 | |
| 46657 chr10 manual_curation exon 20607390 20607649 . + . Parent=GSCOCT00031861001 | |
| 46658 chr10 manual_curation exon 20609132 20609165 . + . Parent=GSCOCT00031861001 | |
| 46659 chr10 manual_curation exon 20610994 20611130 . + . Parent=GSCOCT00031861001 | |
| 46660 chr10 manual_curation exon 20613271 20613337 . + . Parent=GSCOCT00031861001 | |
| 46661 chr10 manual_curation exon 20613618 20613717 . + . Parent=GSCOCT00031861001 | |
| 46662 chr10 manual_curation exon 20614516 20614679 . + . Parent=GSCOCT00031861001 | |
| 46663 chr10 manual_curation exon 20616247 20616293 . + . Parent=GSCOCT00031861001 | |
| 46664 chr10 manual_curation exon 20616407 20616457 . + . Parent=GSCOCT00031861001 | |
| 46665 chr10 manual_curation exon 20618196 20618877 . + . Parent=GSCOCT00031861001 | |
| 46666 chr10 manual_curation CDS 20605558 20605630 . + 0 Parent=GSCOCT00031861001 | |
| 46667 chr10 manual_curation CDS 20607390 20607649 . + 1 Parent=GSCOCT00031861001 | |
| 46668 chr10 manual_curation CDS 20609132 20609165 . + 0 Parent=GSCOCT00031861001 | |
| 46669 chr10 manual_curation CDS 20610994 20611130 . + 1 Parent=GSCOCT00031861001 | |
| 46670 chr10 manual_curation CDS 20613271 20613337 . + 0 Parent=GSCOCT00031861001 | |
| 46671 chr10 manual_curation CDS 20613618 20613717 . + 1 Parent=GSCOCT00031861001 | |
| 46672 chr10 manual_curation CDS 20614516 20614679 . + 2 Parent=GSCOCT00031861001 | |
| 46673 chr10 manual_curation CDS 20616247 20616293 . + 1 Parent=GSCOCT00031861001 | |
| 46674 chr10 manual_curation CDS 20616407 20616457 . + 0 Parent=GSCOCT00031861001 | |
| 46675 chr10 manual_curation CDS 20618196 20618555 . + 0 Parent=GSCOCT00031861001 | |
| 46676 chr10 manual_curation gene 20623487 20631065 . + . ID=GSCOCG00031862001;Name=Cc10_g11850 | |
| 46677 chr10 manual_curation mRNA 20623487 20631065 . + . ID=GSCOCT00031862001;Parent=GSCOCG00031862001;Name=Cc10_g11850 | |
| 46678 chr10 manual_curation polypeptide 20624716 20630803 . + . ID=GSCOCP00031862001;Dbxref=InterPro:IPR000873,InterPro:IPR020845,PFAM:PF00501,PROSITE:PS00455,SwissProt:Q5R668,SwissProt:Q9CAP8,SwissProt:Q9SJD4,TAIR:AT1G77590.1,TAIR:AT2G04350.1,TAIR:AT5G27600.1,TrEMBL:B9RJ88,TrEMBL:D7KUK7,TrEMBL:E0CR69;Derives_from=GSCOCT00031862001;Name=Cc10_g11850;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,CC_EC_number:6.2.1.3,PRODUCT:Long chain acyl-CoA synthetase 9%2C chloroplastic,CC_functional_completeness:complete,CC_gene:LACS9,CC_gene:LACS8,CC_gene:ACSL3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031862001~ Long chain acyl-CoA synthetase 9%2C chloroplastic~ LACS9~ complete;original_location=join(355076..355522%2C355790..355870%2C357069..357338%2C357841..357972%2C358104..358277%2C358378..358607%2C359427..359544%2C359990..360121%2C360193..360327%2C360406..360612%2C360996..361163);owner=coffea | |
| 46679 chr10 manual_curation exon 20623487 20625162 . + . Parent=GSCOCT00031862001 | |
| 46680 chr10 manual_curation exon 20625430 20625510 . + . Parent=GSCOCT00031862001 | |
| 46681 chr10 manual_curation exon 20626709 20626978 . + . Parent=GSCOCT00031862001 | |
| 46682 chr10 manual_curation exon 20627481 20627612 . + . Parent=GSCOCT00031862001 | |
| 46683 chr10 manual_curation exon 20627744 20627917 . + . Parent=GSCOCT00031862001 | |
| 46684 chr10 manual_curation exon 20628018 20628247 . + . Parent=GSCOCT00031862001 | |
| 46685 chr10 manual_curation exon 20629067 20629184 . + . Parent=GSCOCT00031862001 | |
| 46686 chr10 manual_curation exon 20629630 20629761 . + . Parent=GSCOCT00031862001 | |
| 46687 chr10 manual_curation exon 20629833 20629967 . + . Parent=GSCOCT00031862001 | |
| 46688 chr10 manual_curation exon 20630046 20630252 . + . Parent=GSCOCT00031862001 | |
| 46689 chr10 manual_curation exon 20630636 20631065 . + . Parent=GSCOCT00031862001 | |
| 46690 chr10 manual_curation CDS 20624716 20625162 . + 0 Parent=GSCOCT00031862001 | |
| 46691 chr10 manual_curation CDS 20625430 20625510 . + 0 Parent=GSCOCT00031862001 | |
| 46692 chr10 manual_curation CDS 20626709 20626978 . + 0 Parent=GSCOCT00031862001 | |
| 46693 chr10 manual_curation CDS 20627481 20627612 . + 0 Parent=GSCOCT00031862001 | |
| 46694 chr10 manual_curation CDS 20627744 20627917 . + 0 Parent=GSCOCT00031862001 | |
| 46695 chr10 manual_curation CDS 20628018 20628247 . + 0 Parent=GSCOCT00031862001 | |
| 46696 chr10 manual_curation CDS 20629067 20629184 . + 2 Parent=GSCOCT00031862001 | |
| 46697 chr10 manual_curation CDS 20629630 20629761 . + 0 Parent=GSCOCT00031862001 | |
| 46698 chr10 manual_curation CDS 20629833 20629967 . + 0 Parent=GSCOCT00031862001 | |
| 46699 chr10 manual_curation CDS 20630046 20630252 . + 0 Parent=GSCOCT00031862001 | |
| 46700 chr10 manual_curation CDS 20630636 20630803 . + 0 Parent=GSCOCT00031862001 | |
| 46701 chr10 manual_curation gene 20636149 20637800 . + . ID=GSCOCG00031863001;Name=Cc10_g11860 | |
| 46702 chr10 manual_curation mRNA 20636149 20637800 . + . ID=GSCOCT00031863001;Parent=GSCOCG00031863001;Name=Cc10_g11860 | |
| 46703 chr10 manual_curation polypeptide 20636324 20637488 . + . ID=GSCOCP00031863001;Dbxref=TAIR:AT1G21830.1,TAIR:AT1G44608.1,TrEMBL:B9GU42,TrEMBL:B9RJ90,TrEMBL:F6H0L4;Derives_from=GSCOCT00031863001;Name=Cc10_g11860;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B CONTAINS InterPro DOMAIN/s,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031863001~ Putative unknown protein%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF740 (InterPro:IPR008004)%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G44608.1)%3B Has 49 Blast hits to 49 proteins in 12 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 49%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(366684..366972%2C367517..367848);owner=coffea | |
| 46704 chr10 manual_curation exon 20636149 20636612 . + . Parent=GSCOCT00031863001 | |
| 46705 chr10 manual_curation exon 20637157 20637800 . + . Parent=GSCOCT00031863001 | |
| 46706 chr10 manual_curation CDS 20636324 20636612 . + 0 Parent=GSCOCT00031863001 | |
| 46707 chr10 manual_curation CDS 20637157 20637488 . + 1 Parent=GSCOCT00031863001 | |
| 46708 chr10 manual_curation gene 20685980 20687218 . - . ID=GSCOCG00031865001;Name=Cc10_g11870 | |
| 46709 chr10 manual_curation mRNA 20685980 20687218 . - . ID=GSCOCT00031865001;Parent=GSCOCG00031865001;Name=Cc10_g11870 | |
| 46710 chr10 manual_curation polypeptide 20685980 20687218 . - . ID=GSCOCP00031865001;Dbxref=InterPro:IPR001810,InterPro:IPR006527,InterPro:IPR017451,InterPro:IPR022364,PFAM:PF00646,PFAM:PF07734,PROFILE:PS50181,SMART:SM00256,SUPERFAMILY:SSF81383,SwissProt:Q8GXC7,SwissProt:Q9LIR8,SwissProt:Q9SFC7,TAIR:AT3G06240.1,TAIR:AT3G07870.1,TAIR:AT4G12560.1,TIGRFAMs:TIGR01640,TrEMBL:B9I0D0,TrEMBL:B9MUE7,TrEMBL:B9N502;Derives_from=GSCOCT00031865001;Name=Cc10_g11870;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative F-box protein At3g07870,CC_functional_completeness:complete,CC_gene:At3g07870,CC_gene:At3g06240,CC_gene:At3g23880;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031865001~ Putative F-box protein At3g07870~ At3g07870~ complete;original_location=complement(416340..417578);owner=coffea | |
| 46711 chr10 manual_curation exon 20685980 20687218 . - . Parent=GSCOCT00031865001 | |
| 46712 chr10 manual_curation CDS 20685980 20687218 . - 0 Parent=GSCOCT00031865001 | |
| 46713 chr10 manual_curation gene 20691759 20698814 . - . ID=GSCOCG00031866001;Name=Cc10_g11880 | |
| 46714 chr10 manual_curation mRNA 20691759 20698814 . - . ID=GSCOCT00031866001;Parent=GSCOCG00031866001;Name=Cc10_g11880 | |
| 46715 chr10 manual_curation polypeptide 20692041 20698582 . - . ID=GSCOCP00031866001;Dbxref=SwissProt:Q9STN5,TAIR:AT4G08330.1,TrEMBL:B2ZAP7,TrEMBL:C6TFL3,TrEMBL:I1LW80;Derives_from=GSCOCT00031866001;Name=Cc10_g11880;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterized protein At4g08330%2C chloroplastic,CC_functional_completeness:complete,CC_gene:At4g08330;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031866001~ Uncharacterized protein At4g08330%2C chloroplastic~ At4g08330~ complete;original_location=complement(join(428866..428942%2C422401..422785));owner=coffea | |
| 46716 chr10 manual_curation exon 20691759 20692425 . - . Parent=GSCOCT00031866001 | |
| 46717 chr10 manual_curation exon 20698506 20698814 . - . Parent=GSCOCT00031866001 | |
| 46718 chr10 manual_curation CDS 20692041 20692425 . - 2 Parent=GSCOCT00031866001 | |
| 46719 chr10 manual_curation CDS 20698506 20698582 . - 0 Parent=GSCOCT00031866001 | |
| 46720 chr10 manual_curation gene 20705269 20708088 . - . ID=GSCOCG00031867001;Name=Cc10_g11890 | |
| 46721 chr10 manual_curation mRNA 20705269 20708088 . - . ID=GSCOCT00031867001;Parent=GSCOCG00031867001;Name=Cc10_g11890 | |
| 46722 chr10 manual_curation polypeptide 20705608 20707919 . - . ID=GSCOCP00031867001;Dbxref=InterPro:IPR022796,PFAM:PF00504,SwissProt:Q02060,SwissProt:Q9SMB4,SwissProt:Q9XF91,TAIR:AT1G44575.1,TrEMBL:B9RJ42,TrEMBL:E0CR63,TrEMBL:G7J4F9;Derives_from=GSCOCT00031867001;Name=Cc10_g11890;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Photosystem II 22 kDa protein%2C chloroplastic,CC_functional_completeness:complete,CC_gene:PSBS;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031867001~ Photosystem II 22 kDa protein%2C chloroplastic~ PSBS~ complete;original_location=complement(join(438073..438279%2C437841..437963%2C436745..436985%2C435968..436212));owner=coffea | |
| 46723 chr10 manual_curation exon 20705269 20705852 . - . Parent=GSCOCT00031867001 | |
| 46724 chr10 manual_curation exon 20706385 20706625 . - . Parent=GSCOCT00031867001 | |
| 46725 chr10 manual_curation exon 20707481 20707603 . - . Parent=GSCOCT00031867001 | |
| 46726 chr10 manual_curation exon 20707713 20708088 . - . Parent=GSCOCT00031867001 | |
| 46727 chr10 manual_curation CDS 20705608 20705852 . - 1 Parent=GSCOCT00031867001 | |
| 46728 chr10 manual_curation CDS 20706385 20706625 . - 0 Parent=GSCOCT00031867001 | |
| 46729 chr10 manual_curation CDS 20707481 20707603 . - 0 Parent=GSCOCT00031867001 | |
| 46730 chr10 manual_curation CDS 20707713 20707919 . - 0 Parent=GSCOCT00031867001 | |
| 46731 chr10 manual_curation gene 20717279 20717887 . - . ID=GSCOCG00031869001;Name=Cc10_g11900 | |
| 46732 chr10 manual_curation mRNA 20717279 20717887 . - . ID=GSCOCT00031869001;Parent=GSCOCG00031869001;Name=Cc10_g11900 | |
| 46733 chr10 manual_curation polypeptide 20717279 20717887 . - . ID=GSCOCP00031869001;Derives_from=GSCOCT00031869001;Name=Cc10_g11900;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031869001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(448168..448247%2C447979..448083%2C447639..447903));owner=coffea | |
| 46734 chr10 manual_curation exon 20717279 20717543 . - . Parent=GSCOCT00031869001 | |
| 46735 chr10 manual_curation exon 20717619 20717723 . - . Parent=GSCOCT00031869001 | |
| 46736 chr10 manual_curation exon 20717808 20717887 . - . Parent=GSCOCT00031869001 | |
| 46737 chr10 manual_curation CDS 20717279 20717543 . - 2 Parent=GSCOCT00031869001 | |
| 46738 chr10 manual_curation CDS 20717619 20717723 . - 2 Parent=GSCOCT00031869001 | |
| 46739 chr10 manual_curation CDS 20717808 20717887 . - 0 Parent=GSCOCT00031869001 | |
| 46740 chr10 manual_curation gene 20732405 20733110 . + . ID=GSCOCG00031870001;Name=Cc10_g11910 | |
| 46741 chr10 manual_curation mRNA 20732405 20733110 . + . ID=GSCOCT00031870001;Parent=GSCOCG00031870001;Name=Cc10_g11910 | |
| 46742 chr10 manual_curation polypeptide 20732656 20732927 . + . ID=GSCOCP00031870001;Derives_from=GSCOCT00031870001;Name=Cc10_g11910;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031870001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(463016..463118%2C463208..463287);owner=coffea | |
| 46743 chr10 manual_curation exon 20732405 20732509 . + . Parent=GSCOCT00031870001 | |
| 46744 chr10 manual_curation exon 20732634 20732758 . + . Parent=GSCOCT00031870001 | |
| 46745 chr10 manual_curation exon 20732848 20733110 . + . Parent=GSCOCT00031870001 | |
| 46746 chr10 manual_curation CDS 20732656 20732758 . + 0 Parent=GSCOCT00031870001 | |
| 46747 chr10 manual_curation CDS 20732848 20732927 . + 1 Parent=GSCOCT00031870001 | |
| 46748 chr10 manual_curation gene 20790685 20796596 . + . ID=GSCOCG00031871001;Name=Cc10_g11920 | |
| 46749 chr10 manual_curation mRNA 20790685 20796596 . + . ID=GSCOCT00031871001;Parent=GSCOCG00031871001;Name=Cc10_g11920 | |
| 46750 chr10 manual_curation polypeptide 20790826 20796350 . + . ID=GSCOCP00031871001;Dbxref=InterPro:IPR002085,InterPro:IPR002364,InterPro:IPR011032,InterPro:IPR013149,InterPro:IPR013154,InterPro:IPR020843,PANTHER:PTHR11695,PFAM:PF00107,PFAM:PF08240,PROSITE:PS01162,SMART:SM00829,SUPERFAMILY:SSF50129,SwissProt:Q0VC50,SwissProt:Q8H0M1,SwissProt:Q9ZUC1,TAIR:AT1G23740.1,TAIR:AT3G15090.1,TAIR:AT4G13010.1,TrEMBL:A9P8L8,TrEMBL:B9SHB0,TrEMBL:I1KXG0;Derives_from=GSCOCT00031871001;Name=Cc10_g11920;Ontology_term=CC_evidence_code:ISS,GO:0008270,GO:0016491,GO:0055114,CC_EC_number:1.6.5.5,PRODUCT:Quinone oxidoreductase-like protein At1g23740%2C chloroplastic,CC_functional_completeness:complete,CC_gene:At1g23740,CC_gene:QOR,CC_gene:RTN4IP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031871001~ Quinone oxidoreductase-like protein At1g23740%2C chloroplastic~ At1g23740~ complete;original_location=join(521186..521404%2C521486..521809%2C525813..525972%2C526439..526710);owner=coffea | |
| 46751 chr10 manual_curation exon 20790685 20791044 . + . Parent=GSCOCT00031871001 | |
| 46752 chr10 manual_curation exon 20791126 20791449 . + . Parent=GSCOCT00031871001 | |
| 46753 chr10 manual_curation exon 20795453 20795612 . + . Parent=GSCOCT00031871001 | |
| 46754 chr10 manual_curation exon 20796079 20796596 . + . Parent=GSCOCT00031871001 | |
| 46755 chr10 manual_curation CDS 20790826 20791044 . + 0 Parent=GSCOCT00031871001 | |
| 46756 chr10 manual_curation CDS 20791126 20791449 . + 0 Parent=GSCOCT00031871001 | |
| 46757 chr10 manual_curation CDS 20795453 20795612 . + 0 Parent=GSCOCT00031871001 | |
| 46758 chr10 manual_curation CDS 20796079 20796350 . + 1 Parent=GSCOCT00031871001 | |
| 46759 chr10 manual_curation gene 20801355 20807665 . + . ID=GSCOCG00031872001;Name=Cc10_g11930 | |
| 46760 chr10 manual_curation mRNA 20801355 20807665 . + . ID=GSCOCT00031872001;Parent=GSCOCG00031872001;Name=Cc10_g11930 | |
| 46761 chr10 manual_curation polypeptide 20802365 20807368 . + . ID=GSCOCP00031872001;Dbxref=InterPro:IPR008587,PFAM:PF05911,SwissProt:Q8LLE5,SwissProt:Q9MA92,SwissProt:Q9SFF4,TAIR:AT1G21810.1,TAIR:AT1G77580.2,TAIR:AT3G05270.1,TrEMBL:B9GU37,TrEMBL:B9H7F1,TrEMBL:F6H0L3;Derives_from=GSCOCT00031872001;Name=Cc10_g11930;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Filament-like plant protein (Fragment),CC_functional_completeness:complete,CC_gene:FPP,CC_gene:FPP3,CC_gene:FPP2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031872001~ Filament-like plant protein (Fragment)~ FPP~ complete;original_location=join(532725..532832%2C535173..535374%2C535721..537006%2C537330..537728);owner=coffea | |
| 46762 chr10 manual_curation exon 20801355 20801578 . + . Parent=GSCOCT00031872001 | |
| 46763 chr10 manual_curation exon 20802317 20802472 . + . Parent=GSCOCT00031872001 | |
| 46764 chr10 manual_curation exon 20804813 20805014 . + . Parent=GSCOCT00031872001 | |
| 46765 chr10 manual_curation exon 20805361 20806646 . + . Parent=GSCOCT00031872001 | |
| 46766 chr10 manual_curation exon 20806970 20807665 . + . Parent=GSCOCT00031872001 | |
| 46767 chr10 manual_curation CDS 20802365 20802472 . + 0 Parent=GSCOCT00031872001 | |
| 46768 chr10 manual_curation CDS 20804813 20805014 . + 0 Parent=GSCOCT00031872001 | |
| 46769 chr10 manual_curation CDS 20805361 20806646 . + 1 Parent=GSCOCT00031872001 | |
| 46770 chr10 manual_curation CDS 20806970 20807368 . + 0 Parent=GSCOCT00031872001 | |
| 46771 chr10 manual_curation gene 20812622 20817346 . - . ID=GSCOCG00031873001;Name=Cc10_g11940 | |
| 46772 chr10 manual_curation mRNA 20812622 20817346 . - . ID=GSCOCT00031873001;Parent=GSCOCG00031873001;Name=Cc10_g11940 | |
| 46773 chr10 manual_curation polypeptide 20812881 20817165 . - . ID=GSCOCP00031873001;Dbxref=InterPro:IPR006634,PFAM:PF03798,PROFILE:PS50922,SMART:SM00724,TAIR:AT1G21790.1,TrEMBL:B9H7F2,TrEMBL:B9RJ39,TrEMBL:F6H0L2;Derives_from=GSCOCT00031873001;Name=Cc10_g11940;Ontology_term=CC_evidence_code:ISS,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:TRAM%2C LAG1 and CLN8 (TLC) lipid-sensing domain containing protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031873001~ TRAM%2C LAG1 and CLN8 (TLC) lipid-sensing domain containing protein~ unknown_gene~ complete;original_location=complement(join(547288..547525%2C544584..544861%2C543241..543552));owner=coffea | |
| 46774 chr10 manual_curation exon 20812622 20813192 . - . Parent=GSCOCT00031873001 | |
| 46775 chr10 manual_curation exon 20814224 20814501 . - . Parent=GSCOCT00031873001 | |
| 46776 chr10 manual_curation exon 20816928 20817346 . - . Parent=GSCOCT00031873001 | |
| 46777 chr10 manual_curation CDS 20812881 20813192 . - 0 Parent=GSCOCT00031873001 | |
| 46778 chr10 manual_curation CDS 20814224 20814501 . - 1 Parent=GSCOCT00031873001 | |
| 46779 chr10 manual_curation CDS 20816928 20817165 . - 0 Parent=GSCOCT00031873001 | |
| 46780 chr10 manual_curation gene 20832704 20837702 . - . ID=GSCOCG00031874001;Name=Cc10_g11950 | |
| 46781 chr10 manual_curation mRNA 20832704 20837702 . - . ID=GSCOCT00031874001;Parent=GSCOCG00031874001;Name=Cc10_g11950 | |
| 46782 chr10 manual_curation polypeptide 20833455 20837503 . - . ID=GSCOCP00031874001;Dbxref=InterPro:IPR003402,PFAM:PF02475,SwissProt:C5XX79,SwissProt:F6HH45,SwissProt:Q93YU6,TAIR:AT3G56120.1,TAIR:AT4G27340.1,TrEMBL:B9RPA5,TrEMBL:I1K1A8,TrEMBL:I1MUF6;Derives_from=GSCOCT00031874001;Name=Cc10_g11950;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:tRNA (guanine(37)-N1)-methyltransferase 2,CC_functional_completeness:complete,CC_gene:VIT_11s0016g04350,CC_gene:At3g56120,CC_gene:Sb04g025390;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031874001~ tRNA (guanine(37)-N1)-methyltransferase 2~ VIT_11s0016g04350~ complete;original_location=complement(join(567766..567863%2C567589..567686%2C567235..567339%2C566900..566980%2C566657..566730%2C565594..566113%2C565414..565521%2C565021..565179%2C564423..564529%2C563985..564059%2C563815..563880));owner=coffea | |
| 46783 chr10 manual_curation exon 20837654 20837702 . - . Parent=GSCOCT00031874001 | |
| 46784 chr10 manual_curation exon 20832704 20833520 . - . Parent=GSCOCT00031874001 | |
| 46785 chr10 manual_curation exon 20833625 20833699 . - . Parent=GSCOCT00031874001 | |
| 46786 chr10 manual_curation exon 20834063 20834169 . - . Parent=GSCOCT00031874001 | |
| 46787 chr10 manual_curation exon 20834661 20834819 . - . Parent=GSCOCT00031874001 | |
| 46788 chr10 manual_curation exon 20835054 20835161 . - . Parent=GSCOCT00031874001 | |
| 46789 chr10 manual_curation exon 20835234 20835753 . - . Parent=GSCOCT00031874001 | |
| 46790 chr10 manual_curation exon 20836297 20836370 . - . Parent=GSCOCT00031874001 | |
| 46791 chr10 manual_curation exon 20836540 20836620 . - . Parent=GSCOCT00031874001 | |
| 46792 chr10 manual_curation exon 20836875 20836979 . - . Parent=GSCOCT00031874001 | |
| 46793 chr10 manual_curation exon 20837229 20837326 . - . Parent=GSCOCT00031874001 | |
| 46794 chr10 manual_curation exon 20837406 20837540 . - . Parent=GSCOCT00031874001 | |
| 46795 chr10 manual_curation CDS 20833455 20833520 . - 0 Parent=GSCOCT00031874001 | |
| 46796 chr10 manual_curation CDS 20833625 20833699 . - 0 Parent=GSCOCT00031874001 | |
| 46797 chr10 manual_curation CDS 20834063 20834169 . - 1 Parent=GSCOCT00031874001 | |
| 46798 chr10 manual_curation CDS 20834661 20834819 . - 1 Parent=GSCOCT00031874001 | |
| 46799 chr10 manual_curation CDS 20835054 20835161 . - 1 Parent=GSCOCT00031874001 | |
| 46800 chr10 manual_curation CDS 20835234 20835753 . - 0 Parent=GSCOCT00031874001 | |
| 46801 chr10 manual_curation CDS 20836297 20836370 . - 1 Parent=GSCOCT00031874001 | |
| 46802 chr10 manual_curation CDS 20836540 20836620 . - 1 Parent=GSCOCT00031874001 | |
| 46803 chr10 manual_curation CDS 20836875 20836979 . - 1 Parent=GSCOCT00031874001 | |
| 46804 chr10 manual_curation CDS 20837229 20837326 . - 2 Parent=GSCOCT00031874001 | |
| 46805 chr10 manual_curation CDS 20837406 20837503 . - 0 Parent=GSCOCT00031874001 | |
| 46806 chr10 manual_curation gene 20849298 20853600 . + . ID=GSCOCG00031875001;Name=Cc10_g11960 | |
| 46807 chr10 manual_curation mRNA 20849298 20853600 . + . ID=GSCOCT00031875001;Parent=GSCOCG00031875001;Name=Cc10_g11960 | |
| 46808 chr10 manual_curation polypeptide 20849656 20853187 . + . ID=GSCOCP00031875001;Dbxref=TAIR:AT1G17030.1,TAIR:AT2G47010.1,TAIR:AT4G09965.1,TrEMBL:A5ATJ9,TrEMBL:F6HZG4,TrEMBL:I1LAT2;Derives_from=GSCOCT00031875001;Name=Cc10_g11960;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031875001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 17 plant structures%3B EXPRESSED DURING: 10 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17030.1)%3B Has 72 Blast hits to 72 proteins in 13 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 71%3B Viruses - 0%3B Other Eukaryotes - 1 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(580016..580136%2C580350..580975%2C582811..583326%2C583401..583547);owner=coffea | |
| 46809 chr10 manual_curation exon 20849298 20849776 . + . Parent=GSCOCT00031875001 | |
| 46810 chr10 manual_curation exon 20849990 20850615 . + . Parent=GSCOCT00031875001 | |
| 46811 chr10 manual_curation exon 20852451 20852966 . + . Parent=GSCOCT00031875001 | |
| 46812 chr10 manual_curation exon 20853041 20853600 . + . Parent=GSCOCT00031875001 | |
| 46813 chr10 manual_curation CDS 20849656 20849776 . + 0 Parent=GSCOCT00031875001 | |
| 46814 chr10 manual_curation CDS 20849990 20850615 . + 1 Parent=GSCOCT00031875001 | |
| 46815 chr10 manual_curation CDS 20852451 20852966 . + 0 Parent=GSCOCT00031875001 | |
| 46816 chr10 manual_curation CDS 20853041 20853187 . + 0 Parent=GSCOCT00031875001 | |
| 46817 chr10 manual_curation gene 20853698 20859454 . - . ID=GSCOCG00031876001;Name=Cc10_g11970 | |
| 46818 chr10 manual_curation mRNA 20853698 20859454 . - . ID=GSCOCT00031876001;Parent=GSCOCG00031876001;Name=Cc10_g11970 | |
| 46819 chr10 manual_curation polypeptide 20854387 20859454 . - . ID=GSCOCP00031876001;Dbxref=HAMAP:MF_00093,InterPro:IPR000352,InterPro:IPR004373,InterPro:IPR005139,PFAM:PF00472,PFAM:PF03462,SwissProt:B3CL87,SwissProt:Q2RWE1,SwissProt:Q73IC2,TAIR:AT1G56350.1,TAIR:AT2G47020.1,TAIR:AT3G62910.1,TIGRFAMs:TIGR00019,TrEMBL:B9I9C3,TrEMBL:B9RN56,TrEMBL:D7U2V2;Derives_from=GSCOCT00031876001;Name=Cc10_g11970;Ontology_term=CC_evidence_code:ISS,GO:0003747,GO:0005737,GO:0006415,CC_EC_number:missing_EC_number,PRODUCT:Peptide chain release factor 1,CC_functional_completeness:modules,CC_gene:prfA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031876001~ Peptide chain release factor 1~ prfA~ modules;original_location=complement(join(589607..589814%2C588153..588253%2C587711..587809%2C586943..587126%2C586778..586826%2C586620..586698%2C586356..586430%2C586207..586284%2C585907..586065%2C585033..585128%2C584747..584944));owner=coffea | |
| 46820 chr10 manual_curation exon 20853698 20854584 . - . Parent=GSCOCT00031876001 | |
| 46821 chr10 manual_curation exon 20854673 20854768 . - . Parent=GSCOCT00031876001 | |
| 46822 chr10 manual_curation exon 20855547 20855705 . - . Parent=GSCOCT00031876001 | |
| 46823 chr10 manual_curation exon 20855847 20855924 . - . Parent=GSCOCT00031876001 | |
| 46824 chr10 manual_curation exon 20855996 20856070 . - . Parent=GSCOCT00031876001 | |
| 46825 chr10 manual_curation exon 20856260 20856338 . - . Parent=GSCOCT00031876001 | |
| 46826 chr10 manual_curation exon 20856418 20856466 . - . Parent=GSCOCT00031876001 | |
| 46827 chr10 manual_curation exon 20856583 20856766 . - . Parent=GSCOCT00031876001 | |
| 46828 chr10 manual_curation exon 20857351 20857449 . - . Parent=GSCOCT00031876001 | |
| 46829 chr10 manual_curation exon 20857793 20857893 . - . Parent=GSCOCT00031876001 | |
| 46830 chr10 manual_curation exon 20859247 20859454 . - . Parent=GSCOCT00031876001 | |
| 46831 chr10 manual_curation CDS 20854387 20854584 . - 0 Parent=GSCOCT00031876001 | |
| 46832 chr10 manual_curation CDS 20854673 20854768 . - 0 Parent=GSCOCT00031876001 | |
| 46833 chr10 manual_curation CDS 20855547 20855705 . - 0 Parent=GSCOCT00031876001 | |
| 46834 chr10 manual_curation CDS 20855847 20855924 . - 0 Parent=GSCOCT00031876001 | |
| 46835 chr10 manual_curation CDS 20855996 20856070 . - 0 Parent=GSCOCT00031876001 | |
| 46836 chr10 manual_curation CDS 20856260 20856338 . - 2 Parent=GSCOCT00031876001 | |
| 46837 chr10 manual_curation CDS 20856418 20856466 . - 1 Parent=GSCOCT00031876001 | |
| 46838 chr10 manual_curation CDS 20856583 20856766 . - 0 Parent=GSCOCT00031876001 | |
| 46839 chr10 manual_curation CDS 20857351 20857449 . - 0 Parent=GSCOCT00031876001 | |
| 46840 chr10 manual_curation CDS 20857793 20857893 . - 1 Parent=GSCOCT00031876001 | |
| 46841 chr10 manual_curation CDS 20859247 20859454 . - 0 Parent=GSCOCT00031876001 | |
| 46842 chr10 manual_curation gene 20886121 20891487 . + . ID=GSCOCG00031880001;Name=Cc10_g11980 | |
| 46843 chr10 manual_curation mRNA 20886121 20891487 . + . ID=GSCOCT00031880001;Parent=GSCOCG00031880001;Name=Cc10_g11980 | |
| 46844 chr10 manual_curation polypeptide 20886230 20891013 . + . ID=GSCOCP00031880001;Dbxref=GENE3D:G3DSA:2.102.10.10,InterPro:IPR013626,InterPro:IPR015881,InterPro:IPR017941,PFAM:PF00355,PFAM:PF08417,PROFILE:PS51296,PROSITE:PS00570,SUPERFAMILY:SSF50022,SwissProt:Q8S7E1,SwissProt:Q9MBA1,SwissProt:Q9ZWM5,TAIR:AT1G44446.1,TAIR:AT2G24820.1,TAIR:AT4G25650.2,TrEMBL:B9H7F3,TrEMBL:B9RJ38,TrEMBL:I1JZ61;Derives_from=GSCOCT00031880001;Name=Cc10_g11980;Ontology_term=CC_evidence_code:ISS,GO:0005506,GO:0010277,GO:0016491,GO:0055114,CC_EC_number:1.14.13.82,CC_EC_number:1.14.13.82,PRODUCT:Chlorophyllide a oxygenase%2C chloroplastic,CC_functional_completeness:complete,CC_gene:CAO;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031880001~ Chlorophyllide a oxygenase%2C chloroplastic~ CAO~ complete;original_location=join(616590..616667%2C617821..618057%2C618275..618379%2C618678..618953%2C619242..619389%2C619509..619693%2C619782..619894%2C620378..620672%2C621203..621373);owner=coffea | |
| 46845 chr10 manual_curation exon 20886121 20886307 . + . Parent=GSCOCT00031880001 | |
| 46846 chr10 manual_curation exon 20887461 20887697 . + . Parent=GSCOCT00031880001 | |
| 46847 chr10 manual_curation exon 20887915 20888019 . + . Parent=GSCOCT00031880001 | |
| 46848 chr10 manual_curation exon 20888318 20888593 . + . Parent=GSCOCT00031880001 | |
| 46849 chr10 manual_curation exon 20888882 20889029 . + . Parent=GSCOCT00031880001 | |
| 46850 chr10 manual_curation exon 20889149 20889333 . + . Parent=GSCOCT00031880001 | |
| 46851 chr10 manual_curation exon 20889422 20889534 . + . Parent=GSCOCT00031880001 | |
| 46852 chr10 manual_curation exon 20890018 20890312 . + . Parent=GSCOCT00031880001 | |
| 46853 chr10 manual_curation exon 20890843 20891487 . + . Parent=GSCOCT00031880001 | |
| 46854 chr10 manual_curation CDS 20886230 20886307 . + 0 Parent=GSCOCT00031880001 | |
| 46855 chr10 manual_curation CDS 20887461 20887697 . + 0 Parent=GSCOCT00031880001 | |
| 46856 chr10 manual_curation CDS 20887915 20888019 . + 0 Parent=GSCOCT00031880001 | |
| 46857 chr10 manual_curation CDS 20888318 20888593 . + 0 Parent=GSCOCT00031880001 | |
| 46858 chr10 manual_curation CDS 20888882 20889029 . + 0 Parent=GSCOCT00031880001 | |
| 46859 chr10 manual_curation CDS 20889149 20889333 . + 1 Parent=GSCOCT00031880001 | |
| 46860 chr10 manual_curation CDS 20889422 20889534 . + 0 Parent=GSCOCT00031880001 | |
| 46861 chr10 manual_curation CDS 20890018 20890312 . + 2 Parent=GSCOCT00031880001 | |
| 46862 chr10 manual_curation CDS 20890843 20891013 . + 0 Parent=GSCOCT00031880001 | |
| 46863 chr10 manual_curation gene 20893153 20893497 . - . ID=GSCOCG00031881001;Name=Cc10_g11990 | |
| 46864 chr10 manual_curation mRNA 20893153 20893497 . - . ID=GSCOCT00031881001;Parent=GSCOCG00031881001;Name=Cc10_g11990 | |
| 46865 chr10 manual_curation polypeptide 20893153 20893497 . - . ID=GSCOCP00031881001;Dbxref=TAIR:AT1G44414.1,TrEMBL:B9GU34,TrEMBL:B9RJ37,TrEMBL:D7KNS6;Derives_from=GSCOCT00031881001;Name=Cc10_g11990;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B Has 29 Blast hits to 29 proteins in 12 species,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031881001~ unknown protein%3B Has 29 Blast hits to 29 proteins in 12 species: Archae - 0%3B Bacteria - 4%3B Metazoa - 0%3B Fungi - 0%3B Plants - 25%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(623513..623857);owner=coffea | |
| 46866 chr10 manual_curation exon 20893153 20893497 . - . Parent=GSCOCT00031881001 | |
| 46867 chr10 manual_curation CDS 20893153 20893497 . - 0 Parent=GSCOCT00031881001 | |
| 46868 chr10 manual_curation gene 20904275 20905512 . - . ID=GSCOCG00031882001;Name=Cc10_g12000 | |
| 46869 chr10 manual_curation mRNA 20904275 20905512 . - . ID=GSCOCT00031882001;Parent=GSCOCG00031882001;Name=Cc10_g12000 | |
| 46870 chr10 manual_curation polypeptide 20904508 20905512 . - . ID=GSCOCP00031882001;Dbxref=GENE3D:G3DSA:3.30.710.10,InterPro:IPR000210,InterPro:IPR011333,InterPro:IPR013069,PFAM:PF00651,PROFILE:PS50097,SMART:SM00225,SUPERFAMILY:SSF54695,SwissProt:Q680K8,SwissProt:Q94420,SwissProt:Q9XHZ8,TAIR:AT1G21780.1,TAIR:AT1G55760.1,TAIR:AT2G39760.1,TrEMBL:B9H7F4,TrEMBL:B9RJ33,TrEMBL:E0CR58;Derives_from=GSCOCT00031882001;Name=Cc10_g12000;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:BTB/POZ domain-containing protein At1g21780,CC_functional_completeness:fragment,CC_gene:At1g21780,CC_gene:At1g55760,CC_gene:mel-26;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031882001~ BTB/POZ domain-containing protein At1g21780~ At1g21780~ fragment;original_location=complement(join(635750..635872%2C634868..635473));owner=coffea | |
| 46871 chr10 manual_curation exon 20904275 20905113 . - . Parent=GSCOCT00031882001 | |
| 46872 chr10 manual_curation exon 20905390 20905512 . - . Parent=GSCOCT00031882001 | |
| 46873 chr10 manual_curation CDS 20904508 20905113 . - 0 Parent=GSCOCT00031882001 | |
| 46874 chr10 manual_curation CDS 20905390 20905512 . - 0 Parent=GSCOCT00031882001 | |
| 46875 chr10 manual_curation gene 20937306 20940546 . + . ID=GSCOCG00031883001;Name=Cc10_g12010 | |
| 46876 chr10 manual_curation mRNA 20937306 20940546 . + . ID=GSCOCT00031883001;Parent=GSCOCG00031883001;Name=Cc10_g12010 | |
| 46877 chr10 manual_curation polypeptide 20937363 20940075 . + . ID=GSCOCP00031883001;Dbxref=GENE3D:G3DSA:3.40.630.30,InterPro:IPR016181,SwissProt:Q9CAQ2,TAIR:AT1G21770.1,TAIR:AT1G77540.1,TrEMBL:B9H7F5,TrEMBL:B9RJ31,TrEMBL:D7KUK3;Derives_from=GSCOCT00031883001;Name=Cc10_g12010;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Acetyltransferase At1g77540,CC_functional_completeness:complete,CC_gene:At1g77540;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031883001~ Acetyltransferase At1g77540~ At1g77540~ complete;original_location=join(667723..667983%2C670364..670435);owner=coffea | |
| 46878 chr10 manual_curation exon 20940254 20940546 . + . Parent=GSCOCT00031883001 | |
| 46879 chr10 manual_curation exon 20937306 20937623 . + . Parent=GSCOCT00031883001 | |
| 46880 chr10 manual_curation exon 20940004 20940083 . + . Parent=GSCOCT00031883001 | |
| 46881 chr10 manual_curation CDS 20937363 20937623 . + 0 Parent=GSCOCT00031883001 | |
| 46882 chr10 manual_curation CDS 20940004 20940075 . + 0 Parent=GSCOCT00031883001 | |
| 46883 chr10 manual_curation gene 20942409 20950646 . - . ID=GSCOCG00031885001;Name=Cc10_g12020 | |
| 46884 chr10 manual_curation mRNA 20942409 20950646 . - . ID=GSCOCT00031885001;Parent=GSCOCG00031885001;Name=Cc10_g12020 | |
| 46885 chr10 manual_curation polypeptide 20942442 20950397 . - . ID=GSCOCP00031885001;Dbxref=InterPro:IPR001810,InterPro:IPR022364,PFAM:PF00646,PROFILE:PS50181,SMART:SM00256,SUPERFAMILY:SSF81383,SwissProt:Q3ZBT2,SwissProt:Q9UK97,SwissProt:Q9XI00,TAIR:AT1G21760.1,TrEMBL:B7FL96,TrEMBL:C6T7Z2,TrEMBL:I1JZ38;Derives_from=GSCOCT00031885001;Name=Cc10_g12020;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:F-box protein 7,CC_functional_completeness:complete,CC_gene:SKIP32,CC_gene:FBXO9;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031885001~ F-box protein 7~ SKIP32~ complete;original_location=complement(join(680748..680757%2C679980..680063%2C679729..679841%2C677314..677430%2C677121..677217%2C675746..675819%2C674568..674621%2C674368..674469%2C674106..674164%2C673441..673651%2C672802..672861));owner=coffea | |
| 46886 chr10 manual_curation exon 20942409 20942501 . - . Parent=GSCOCT00031885001 | |
| 46887 chr10 manual_curation exon 20943081 20943291 . - . Parent=GSCOCT00031885001 | |
| 46888 chr10 manual_curation exon 20943746 20943804 . - . Parent=GSCOCT00031885001 | |
| 46889 chr10 manual_curation exon 20944008 20944109 . - . Parent=GSCOCT00031885001 | |
| 46890 chr10 manual_curation exon 20944208 20944261 . - . Parent=GSCOCT00031885001 | |
| 46891 chr10 manual_curation exon 20945386 20945459 . - . Parent=GSCOCT00031885001 | |
| 46892 chr10 manual_curation exon 20946761 20946857 . - . Parent=GSCOCT00031885001 | |
| 46893 chr10 manual_curation exon 20946954 20947070 . - . Parent=GSCOCT00031885001 | |
| 46894 chr10 manual_curation exon 20949369 20949481 . - . Parent=GSCOCT00031885001 | |
| 46895 chr10 manual_curation exon 20949620 20949703 . - . Parent=GSCOCT00031885001 | |
| 46896 chr10 manual_curation exon 20950388 20950646 . - . Parent=GSCOCT00031885001 | |
| 46897 chr10 manual_curation CDS 20942442 20942501 . - 0 Parent=GSCOCT00031885001 | |
| 46898 chr10 manual_curation CDS 20943081 20943291 . - 2 Parent=GSCOCT00031885001 | |
| 46899 chr10 manual_curation CDS 20943746 20943804 . - 0 Parent=GSCOCT00031885001 | |
| 46900 chr10 manual_curation CDS 20944008 20944109 . - 0 Parent=GSCOCT00031885001 | |
| 46901 chr10 manual_curation CDS 20944208 20944261 . - 0 Parent=GSCOCT00031885001 | |
| 46902 chr10 manual_curation CDS 20945386 20945459 . - 1 Parent=GSCOCT00031885001 | |
| 46903 chr10 manual_curation CDS 20946761 20946857 . - 0 Parent=GSCOCT00031885001 | |
| 46904 chr10 manual_curation CDS 20946954 20947070 . - 0 Parent=GSCOCT00031885001 | |
| 46905 chr10 manual_curation CDS 20949369 20949481 . - 1 Parent=GSCOCT00031885001 | |
| 46906 chr10 manual_curation CDS 20949620 20949703 . - 1 Parent=GSCOCT00031885001 | |
| 46907 chr10 manual_curation CDS 20950388 20950397 . - 0 Parent=GSCOCT00031885001 | |
| 46908 chr10 manual_curation gene 21055317 21061098 . + . ID=GSCOCG00031886001;Name=Cc10_g12030 | |
| 46909 chr10 manual_curation mRNA 21055317 21061098 . + . ID=GSCOCT00031886001;Parent=GSCOCG00031886001;Name=Cc10_g12030 | |
| 46910 chr10 manual_curation polypeptide 21055839 21060808 . + . ID=GSCOCP00031886001;Dbxref=InterPro:IPR002933,InterPro:IPR010168,InterPro:IPR011650,InterPro:IPR017439,PFAM:PF01546,PFAM:PF07687,PIR:PIRSF005962,SUPERFAMILY:SSF55031,SwissProt:O04373,SwissProt:Q5Z678,SwissProt:Q8VYX0,TAIR:AT1G44350.1,TAIR:AT1G51760.1,TAIR:AT1G51780.1,TIGRFAMs:TIGR01891,TrEMBL:B9RJ28,TrEMBL:I1JZ39,TrEMBL:I1KAC2;Derives_from=GSCOCT00031886001;Name=Cc10_g12030;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008152,GO:0016787,CC_EC_number:3.5.1.32,PRODUCT:IAA-amino acid hydrolase ILR1-like 6,CC_functional_completeness:fragment,CC_gene:ILL6,CC_gene:ILL4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031886001~ IAA-amino acid hydrolase ILR1-like 6~ ILL6~ fragment;original_location=join(786199..786312%2C787142..787267%2C789872..790186%2C790567..790695%2C790800..791168);owner=coffea | |
| 46911 chr10 manual_curation exon 21055317 21055952 . + . Parent=GSCOCT00031886001 | |
| 46912 chr10 manual_curation exon 21056782 21056907 . + . Parent=GSCOCT00031886001 | |
| 46913 chr10 manual_curation exon 21059512 21059826 . + . Parent=GSCOCT00031886001 | |
| 46914 chr10 manual_curation exon 21060207 21060335 . + . Parent=GSCOCT00031886001 | |
| 46915 chr10 manual_curation exon 21060440 21061098 . + . Parent=GSCOCT00031886001 | |
| 46916 chr10 manual_curation CDS 21055839 21055952 . + 0 Parent=GSCOCT00031886001 | |
| 46917 chr10 manual_curation CDS 21056782 21056907 . + 0 Parent=GSCOCT00031886001 | |
| 46918 chr10 manual_curation CDS 21059512 21059826 . + 0 Parent=GSCOCT00031886001 | |
| 46919 chr10 manual_curation CDS 21060207 21060335 . + 0 Parent=GSCOCT00031886001 | |
| 46920 chr10 manual_curation CDS 21060440 21060808 . + 0 Parent=GSCOCT00031886001 | |
| 46921 chr10 manual_curation gene 21064815 21066448 . - . ID=GSCOCG00031887001;Name=Cc10_g12040 | |
| 46922 chr10 manual_curation mRNA 21064815 21066448 . - . ID=GSCOCT00031887001;Parent=GSCOCG00031887001;Name=Cc10_g12040 | |
| 46923 chr10 manual_curation polypeptide 21064815 21066448 . - . ID=GSCOCP00031887001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR011009,PFAM:PF07714,PROFILE:PS50011,SUPERFAMILY:SSF56112,SwissProt:Q8VZG8,TAIR:AT1G35710.1,TAIR:AT4G08850.1,TrEMBL:A5AGK9,TrEMBL:F6GSK7,TrEMBL:I1MLQ0;Derives_from=GSCOCT00031887001;Name=Cc10_g12040;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0005524,GO:0006468,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:At4g08850;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031887001~ Putative uncharacterized protein~ At4g08850~ fragment;original_location=complement(join(796730..796808%2C796163..796216%2C795175..795377));owner=coffea | |
| 46924 chr10 manual_curation exon 21064815 21065017 . - . Parent=GSCOCT00031887001 | |
| 46925 chr10 manual_curation exon 21065803 21065856 . - . Parent=GSCOCT00031887001 | |
| 46926 chr10 manual_curation exon 21066370 21066448 . - . Parent=GSCOCT00031887001 | |
| 46927 chr10 manual_curation CDS 21064815 21065017 . - 1 Parent=GSCOCT00031887001 | |
| 46928 chr10 manual_curation CDS 21065803 21065856 . - 1 Parent=GSCOCT00031887001 | |
| 46929 chr10 manual_curation CDS 21066370 21066448 . - 0 Parent=GSCOCT00031887001 | |
| 46930 chr10 manual_curation gene 21127201 21128636 . + . ID=GSCOCG00031888001;Name=Cc10_g12050 | |
| 46931 chr10 manual_curation mRNA 21127201 21128636 . + . ID=GSCOCT00031888001;Parent=GSCOCG00031888001;Name=Cc10_g12050 | |
| 46932 chr10 manual_curation polypeptide 21127201 21128124 . + . ID=GSCOCP00031888001;Dbxref=SwissProt:O24160,TAIR:AT3G14880.1,TAIR:AT4G18680.1,TAIR:AT4G18690.1,TrEMBL:D7SWH0,TrEMBL:G7LF21,TrEMBL:Q40443;Derives_from=GSCOCT00031888001;Name=Cc10_g12050;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:TGA21;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031888001~ Putative BEST Arabidopsis thaliana protein match is: transcription factor-related (TAIR:AT4G18650.1)%3B Has 560 Blast hits to 560 proteins in 40 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2%3B Fungi - 0%3B Plants - 558%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ TGA21~ complete;original_location=857561..858484;owner=coffea | |
| 46933 chr10 manual_curation exon 21127201 21128636 . + . Parent=GSCOCT00031888001 | |
| 46934 chr10 manual_curation CDS 21127201 21128124 . + 0 Parent=GSCOCT00031888001 | |
| 46935 chr10 manual_curation gene 21128687 21134810 . - . ID=GSCOCG00031889001;Name=Cc10_g12060 | |
| 46936 chr10 manual_curation mRNA 21128687 21134810 . - . ID=GSCOCT00031889001;Parent=GSCOCG00031889001;Name=Cc10_g12060 | |
| 46937 chr10 manual_curation polypeptide 21129992 21134674 . - . ID=GSCOCP00031889001;Dbxref=GENE3D:G3DSA:3.40.30.10,InterPro:IPR005788,InterPro:IPR005792,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR013766,InterPro:IPR017936,InterPro:IPR017937,PFAM:PF00085,PRINTS:PR00421,PROFILE:PS51352,PROSITE:PS00194,SUPERFAMILY:SSF52833,SwissProt:P29828,SwissProt:Q43116,SwissProt:Q9XF61,TAIR:AT1G21750.1,TAIR:AT1G77510.1,TAIR:AT5G60640.1,TIGRFAMs:TIGR01126,TIGRFAMs:TIGR01130,TrEMBL:B9RJ25,TrEMBL:E0CR49,TrEMBL:I1KAB7;Derives_from=GSCOCT00031889001;Name=Cc10_g12060;Ontology_term=CC_evidence_code:ISS,GO:0005783,GO:0016853,GO:0045454,CC_EC_number:5.3.4.1,PRODUCT:Protein disulfide-isomerase,CC_functional_completeness:complete,CC_gene:PDI;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031889001~ Protein disulfide-isomerase~ PDI~ complete;original_location=complement(join(864841..865034%2C864021..864051%2C863625..863912%2C863302..863490%2C863084..863209%2C862410..862547%2C862210..862329%2C861819..861936%2C861111..861223%2C860352..860540));owner=coffea | |
| 46938 chr10 manual_curation exon 21128687 21130180 . - . Parent=GSCOCT00031889001 | |
| 46939 chr10 manual_curation exon 21130751 21130863 . - . Parent=GSCOCT00031889001 | |
| 46940 chr10 manual_curation exon 21131459 21131576 . - . Parent=GSCOCT00031889001 | |
| 46941 chr10 manual_curation exon 21131850 21131969 . - . Parent=GSCOCT00031889001 | |
| 46942 chr10 manual_curation exon 21132050 21132187 . - . Parent=GSCOCT00031889001 | |
| 46943 chr10 manual_curation exon 21132724 21132849 . - . Parent=GSCOCT00031889001 | |
| 46944 chr10 manual_curation exon 21132942 21133130 . - . Parent=GSCOCT00031889001 | |
| 46945 chr10 manual_curation exon 21133265 21133552 . - . Parent=GSCOCT00031889001 | |
| 46946 chr10 manual_curation exon 21133661 21133691 . - . Parent=GSCOCT00031889001 | |
| 46947 chr10 manual_curation exon 21134481 21134810 . - . Parent=GSCOCT00031889001 | |
| 46948 chr10 manual_curation CDS 21129992 21130180 . - 0 Parent=GSCOCT00031889001 | |
| 46949 chr10 manual_curation CDS 21130751 21130863 . - 1 Parent=GSCOCT00031889001 | |
| 46950 chr10 manual_curation CDS 21131459 21131576 . - 0 Parent=GSCOCT00031889001 | |
| 46951 chr10 manual_curation CDS 21131850 21131969 . - 0 Parent=GSCOCT00031889001 | |
| 46952 chr10 manual_curation CDS 21132050 21132187 . - 0 Parent=GSCOCT00031889001 | |
| 46953 chr10 manual_curation CDS 21132724 21132849 . - 0 Parent=GSCOCT00031889001 | |
| 46954 chr10 manual_curation CDS 21132942 21133130 . - 0 Parent=GSCOCT00031889001 | |
| 46955 chr10 manual_curation CDS 21133265 21133552 . - 0 Parent=GSCOCT00031889001 | |
| 46956 chr10 manual_curation CDS 21133661 21133691 . - 2 Parent=GSCOCT00031889001 | |
| 46957 chr10 manual_curation CDS 21134481 21134674 . - 0 Parent=GSCOCT00031889001 | |
| 46958 chr10 manual_curation gene 21142080 21148436 . - . ID=GSCOCG00031890001;Name=Cc10_g12070 | |
| 46959 chr10 manual_curation mRNA 21142080 21148436 . - . ID=GSCOCT00031890001;Parent=GSCOCG00031890001;Name=Cc10_g12070 | |
| 46960 chr10 manual_curation polypeptide 21142523 21148436 . - . ID=GSCOCP00031890001;Dbxref=InterPro:IPR006867,InterPro:IPR006868,PFAM:PF04782,PFAM:PF04783,TAIR:AT1G21740.1,TAIR:AT1G77500.1,TAIR:AT4G35240.1,TrEMBL:A5BVU0,TrEMBL:B9GU25,TrEMBL:D7KKU0;Derives_from=GSCOCT00031890001;Name=Cc10_g12070;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of unknown function (DUF630 and DUF632),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031890001~ Putative Protein of unknown function (DUF630 and DUF632)~ unknown_gene~ complete;original_location=complement(join(878579..878796%2C877047..878488%2C875767..875981%2C874169..874392%2C872883..873681));owner=coffea | |
| 46961 chr10 manual_curation exon 21142080 21143321 . - . Parent=GSCOCT00031890001 | |
| 46962 chr10 manual_curation exon 21143809 21144032 . - . Parent=GSCOCT00031890001 | |
| 46963 chr10 manual_curation exon 21145407 21145621 . - . Parent=GSCOCT00031890001 | |
| 46964 chr10 manual_curation exon 21146687 21148128 . - . Parent=GSCOCT00031890001 | |
| 46965 chr10 manual_curation exon 21148219 21148436 . - . Parent=GSCOCT00031890001 | |
| 46966 chr10 manual_curation CDS 21142523 21143321 . - 2 Parent=GSCOCT00031890001 | |
| 46967 chr10 manual_curation CDS 21143809 21144032 . - 0 Parent=GSCOCT00031890001 | |
| 46968 chr10 manual_curation CDS 21145407 21145621 . - 1 Parent=GSCOCT00031890001 | |
| 46969 chr10 manual_curation CDS 21146687 21148128 . - 2 Parent=GSCOCT00031890001 | |
| 46970 chr10 manual_curation CDS 21148219 21148436 . - 0 Parent=GSCOCT00031890001 | |
| 46971 chr10 manual_curation gene 21159766 21170554 . - . ID=GSCOCG00031893001;Name=Cc10_g12080 | |
| 46972 chr10 manual_curation mRNA 21159766 21170554 . - . ID=GSCOCT00031893001;Parent=GSCOCG00031893001;Name=Cc10_g12080 | |
| 46973 chr10 manual_curation polypeptide 21160604 21170481 . - . ID=GSCOCP00031893001;Dbxref=InterPro:IPR002016,InterPro:IPR002207,InterPro:IPR010255,InterPro:IPR019793,PFAM:PF00141,PRINTS:PR00458,PRINTS:PR00459,PROFILE:PS50873,PROSITE:PS00435,SUPERFAMILY:SSF48113,SwissProt:Q42592,SwissProt:Q42593,SwissProt:Q69SV0,TAIR:AT1G77490.1,TAIR:AT4G08390.1,TAIR:AT4G35000.1,TrEMBL:Q3SC88;Derives_from=GSCOCT00031893001;Name=Cc10_g12080;Ontology_term=CC_evidence_code:ISS,GO:0004601,GO:0006979,GO:0020037,GO:0055114,CC_EC_number:1.11.1.11,PRODUCT:L-ascorbate peroxidase T%2C chloroplastic,CC_functional_completeness:complete,CC_gene:APXT,CC_gene:APX8,CC_gene:APXS;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031893001~ L-ascorbate peroxidase T%2C chloroplastic~ APXT~ complete;original_location=complement(join(900692..900841%2C900454..900606%2C898668..898788%2C898496..898596%2C898285..898419%2C896967..897087%2C896795..896895%2C896631..896718%2C894252..894319%2C894081..894167%2C892146..892220%2C891977..892054%2C891778..891882%2C891094..891168%2C890964..890969));owner=coffea | |
| 46974 chr10 manual_curation exon 21159766 21160609 . - . Parent=GSCOCT00031893001 | |
| 46975 chr10 manual_curation exon 21160734 21160808 . - . Parent=GSCOCT00031893001 | |
| 46976 chr10 manual_curation exon 21161418 21161522 . - . Parent=GSCOCT00031893001 | |
| 46977 chr10 manual_curation exon 21161617 21161694 . - . Parent=GSCOCT00031893001 | |
| 46978 chr10 manual_curation exon 21161786 21161860 . - . Parent=GSCOCT00031893001 | |
| 46979 chr10 manual_curation exon 21163721 21163807 . - . Parent=GSCOCT00031893001 | |
| 46980 chr10 manual_curation exon 21163892 21163959 . - . Parent=GSCOCT00031893001 | |
| 46981 chr10 manual_curation exon 21166271 21166358 . - . Parent=GSCOCT00031893001 | |
| 46982 chr10 manual_curation exon 21166435 21166535 . - . Parent=GSCOCT00031893001 | |
| 46983 chr10 manual_curation exon 21166607 21166727 . - . Parent=GSCOCT00031893001 | |
| 46984 chr10 manual_curation exon 21167925 21168059 . - . Parent=GSCOCT00031893001 | |
| 46985 chr10 manual_curation exon 21168136 21168236 . - . Parent=GSCOCT00031893001 | |
| 46986 chr10 manual_curation exon 21168308 21168428 . - . Parent=GSCOCT00031893001 | |
| 46987 chr10 manual_curation exon 21170094 21170246 . - . Parent=GSCOCT00031893001 | |
| 46988 chr10 manual_curation exon 21170332 21170554 . - . Parent=GSCOCT00031893001 | |
| 46989 chr10 manual_curation CDS 21160604 21160609 . - 0 Parent=GSCOCT00031893001 | |
| 46990 chr10 manual_curation CDS 21160734 21160808 . - 0 Parent=GSCOCT00031893001 | |
| 46991 chr10 manual_curation CDS 21161418 21161522 . - 0 Parent=GSCOCT00031893001 | |
| 46992 chr10 manual_curation CDS 21161617 21161694 . - 0 Parent=GSCOCT00031893001 | |
| 46993 chr10 manual_curation CDS 21161786 21161860 . - 0 Parent=GSCOCT00031893001 | |
| 46994 chr10 manual_curation CDS 21163721 21163807 . - 0 Parent=GSCOCT00031893001 | |
| 46995 chr10 manual_curation CDS 21163892 21163959 . - 1 Parent=GSCOCT00031893001 | |
| 46996 chr10 manual_curation CDS 21166271 21166358 . - 0 Parent=GSCOCT00031893001 | |
| 46997 chr10 manual_curation CDS 21166435 21166535 . - 1 Parent=GSCOCT00031893001 | |
| 46998 chr10 manual_curation CDS 21166607 21166727 . - 0 Parent=GSCOCT00031893001 | |
| 46999 chr10 manual_curation CDS 21167925 21168059 . - 0 Parent=GSCOCT00031893001 | |
| 47000 chr10 manual_curation CDS 21168136 21168236 . - 1 Parent=GSCOCT00031893001 | |
| 47001 chr10 manual_curation CDS 21168308 21168428 . - 0 Parent=GSCOCT00031893001 | |
| 47002 chr10 manual_curation CDS 21170094 21170246 . - 0 Parent=GSCOCT00031893001 | |
| 47003 chr10 manual_curation CDS 21170332 21170481 . - 0 Parent=GSCOCT00031893001 | |
| 47004 chr10 manual_curation gene 21190460 21191861 . - . ID=GSCOCG00031895001;Name=Cc10_g12090 | |
| 47005 chr10 manual_curation mRNA 21190460 21191861 . - . ID=GSCOCT00031895001;Parent=GSCOCG00031895001;Name=Cc10_g12090 | |
| 47006 chr10 manual_curation polypeptide 21190460 21191861 . - . ID=GSCOCP00031895001;Dbxref=InterPro:IPR002939,InterPro:IPR003095,InterPro:IPR008971,InterPro:IPR015609,PANTHER:PTHR11821,PFAM:PF01556,PRINTS:PR00625,SUPERFAMILY:SSF49493,SwissProt:P59910,SwissProt:Q09912,SwissProt:Q80Y75,TAIR:AT1G11040.1,TAIR:AT1G44160.1,TAIR:AT2G20560.1,TrEMBL:B9H7G4,TrEMBL:B9S2Y2,TrEMBL:F6H935;Derives_from=GSCOCT00031895001;Name=Cc10_g12090;Ontology_term=CC_evidence_code:ISS,GO:0006457,GO:0031072,GO:0051082,CC_EC_number:missing_EC_number,PRODUCT:Putative HSP40/DnaJ peptide-binding protein,CC_functional_completeness:fragment,CC_gene:DNAJB13,CC_gene:Dnajb13,CC_gene:psi1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031895001~ Putative HSP40/DnaJ peptide-binding protein~ DNAJB13~ fragment;original_location=complement(join(921788..922221%2C920820..921264));owner=coffea | |
| 47007 chr10 manual_curation exon 21190460 21190904 . - . Parent=GSCOCT00031895001 | |
| 47008 chr10 manual_curation exon 21191428 21191861 . - . Parent=GSCOCT00031895001 | |
| 47009 chr10 manual_curation CDS 21190460 21190904 . - 2 Parent=GSCOCT00031895001 | |
| 47010 chr10 manual_curation CDS 21191428 21191861 . - 0 Parent=GSCOCT00031895001 | |
| 47011 chr10 manual_curation gene 21265658 21269289 . - . ID=GSCOCG00031897001;Name=Cc10_g12100 | |
| 47012 chr10 manual_curation mRNA 21265658 21269289 . - . ID=GSCOCT00031897001;Parent=GSCOCG00031897001;Name=Cc10_g12100 | |
| 47013 chr10 manual_curation polypeptide 21265658 21269177 . - . ID=GSCOCP00031897001;Dbxref=InterPro:IPR004217,PFAM:PF02953,SwissProt:Q9XGX7,SwissProt:Q9XGX8,SwissProt:Q9XGX9,TAIR:AT3G46560.1,TrEMBL:A6MZE3,TrEMBL:I1R7D5,TrEMBL:Q0IMG2;Derives_from=GSCOCT00031897001;Name=Cc10_g12100;Ontology_term=CC_evidence_code:ISS,GO:0006626,GO:0042719,GO:0045039,CC_EC_number:missing_EC_number,PRODUCT:Mitochondrial import inner membrane translocase subunit Tim9,CC_functional_completeness:complete,CC_gene:TIM9;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031897001~ Mitochondrial import inner membrane translocase subunit Tim9~ TIM9~ complete;original_location=complement(join(999443..999537%2C996018..996204));owner=coffea | |
| 47014 chr10 manual_curation exon 21265658 21265844 . - . Parent=GSCOCT00031897001 | |
| 47015 chr10 manual_curation exon 21269083 21269289 . - . Parent=GSCOCT00031897001 | |
| 47016 chr10 manual_curation CDS 21265658 21265844 . - 2 Parent=GSCOCT00031897001 | |
| 47017 chr10 manual_curation CDS 21269083 21269177 . - 0 Parent=GSCOCT00031897001 | |
| 47018 chr10 manual_curation gene 21313928 21316232 . + . ID=GSCOCG00031898001;Name=Cc10_g12110 | |
| 47019 chr10 manual_curation mRNA 21313928 21316232 . + . ID=GSCOCT00031898001;Parent=GSCOCG00031898001;Name=Cc10_g12110 | |
| 47020 chr10 manual_curation polypeptide 21313985 21316007 . + . ID=GSCOCP00031898001;Dbxref=GENE3D:G3DSA:2.60.120.10,InterPro:IPR001929,InterPro:IPR006045,InterPro:IPR011051,InterPro:IPR014710,PFAM:PF00190,PRINTS:PR00325,SMART:SM00835,SUPERFAMILY:SSF51182,SwissProt:P92996,SwissProt:Q9M8X6,SwissProt:Q9SFF9,TAIR:AT3G04200.1,TAIR:AT3G05950.1,TAIR:AT5G39190.1,TrEMBL:B9I5S7,TrEMBL:B9I5S8,TrEMBL:B9T166;Derives_from=GSCOCT00031898001;Name=Cc10_g12110;Ontology_term=CC_evidence_code:ISS,GO:0030145,GO:0045735,GO:0048046,CC_EC_number:1.2.3.4,PRODUCT:Germin-like protein subfamily 1 member 7,CC_functional_completeness:complete,CC_gene:At3g05950,CC_gene:At3g04200,CC_gene:GLP5A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031898001~ Germin-like protein subfamily 1 member 7~ At3g05950~ complete;original_location=join(1044345..1044471%2C1045820..1046367);owner=coffea | |
| 47021 chr10 manual_curation exon 21313928 21314111 . + . Parent=GSCOCT00031898001 | |
| 47022 chr10 manual_curation exon 21315460 21316232 . + . Parent=GSCOCT00031898001 | |
| 47023 chr10 manual_curation CDS 21313985 21314111 . + 0 Parent=GSCOCT00031898001 | |
| 47024 chr10 manual_curation CDS 21315460 21316007 . + 1 Parent=GSCOCT00031898001 | |
| 47025 chr10 manual_curation gene 21343905 21346115 . - . ID=GSCOCG00031899001;Name=Cc10_g12120 | |
| 47026 chr10 manual_curation mRNA 21343905 21346115 . - . ID=GSCOCT00031899001;Parent=GSCOCG00031899001;Name=Cc10_g12120 | |
| 47027 chr10 manual_curation polypeptide 21344146 21346075 . - . ID=GSCOCP00031899001;Dbxref=GENE3D:G3DSA:2.60.120.10,InterPro:IPR001929,InterPro:IPR006045,InterPro:IPR011051,InterPro:IPR014710,PFAM:PF00190,PRINTS:PR00325,SMART:SM00835,SUPERFAMILY:SSF51182,SwissProt:P92996,SwissProt:P92997,SwissProt:Q9SFF9,TAIR:AT3G05950.1,TAIR:AT5G39160.1,TAIR:AT5G39190.1,TrEMBL:B9I5S7,TrEMBL:B9I5S8,TrEMBL:B9T166;Derives_from=GSCOCT00031899001;Name=Cc10_g12120;Ontology_term=CC_evidence_code:ISS,GO:0030145,GO:0045735,GO:0048046,CC_EC_number:1.2.3.4,PRODUCT:Germin-like protein subfamily 1 member 7,CC_functional_completeness:complete,CC_gene:At3g05950,CC_gene:GLP6,CC_gene:GLP5A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031899001~ Germin-like protein subfamily 1 member 7~ At3g05950~ complete;original_location=complement(join(1076309..1076435%2C1074506..1075053));owner=coffea | |
| 47028 chr10 manual_curation exon 21343905 21344693 . - . Parent=GSCOCT00031899001 | |
| 47029 chr10 manual_curation exon 21345949 21346115 . - . Parent=GSCOCT00031899001 | |
| 47030 chr10 manual_curation CDS 21344146 21344693 . - 1 Parent=GSCOCT00031899001 | |
| 47031 chr10 manual_curation CDS 21345949 21346075 . - 0 Parent=GSCOCT00031899001 | |
| 47032 chr10 manual_curation gene 21386042 21387160 . - . ID=GSCOCG00031902001;Name=Cc10_g12130 | |
| 47033 chr10 manual_curation mRNA 21386042 21387160 . - . ID=GSCOCT00031902001;Parent=GSCOCG00031902001;Name=Cc10_g12130 | |
| 47034 chr10 manual_curation polypeptide 21386042 21387160 . - . ID=GSCOCP00031902001;Dbxref=GENE3D:G3DSA:1.25.40.20,InterPro:IPR000953,InterPro:IPR002110,InterPro:IPR016197,InterPro:IPR020683,PFAM:PF00023,PFAM:PF00385,PROFILE:PS50013,PROFILE:PS50088,PROFILE:PS50297,SMART:SM00248,SMART:SM00298,SUPERFAMILY:SSF48403,SUPERFAMILY:SSF54160,SwissProt:O22265,SwissProt:Q8LSQ2,TAIR:AT2G47450.1,TAIR:AT4G35450.5,TrEMBL:A5C8N4,TrEMBL:B9HR05,TrEMBL:F6I0T6;Derives_from=GSCOCT00031902001;Name=Cc10_g12130;Ontology_term=CC_evidence_code:ISS,GO:0000785,GO:0003682,GO:0005634,GO:0006333,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable signal recognition particle 43 kDa protein%2C chloroplastic,CC_functional_completeness:complete,CC_gene:CAO,CC_gene:Os03g0131900;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031902001~ Putative Probable signal recognition particle 43 kDa protein%2C chloroplastic~ CAO~ complete;original_location=complement(1116402..1117520);owner=coffea | |
| 47035 chr10 manual_curation exon 21386042 21387160 . - . Parent=GSCOCT00031902001 | |
| 47036 chr10 manual_curation CDS 21386042 21387160 . - 0 Parent=GSCOCT00031902001 | |
| 47037 chr10 manual_curation gene 21405741 21409242 . + . ID=GSCOCG00031905001;Name=Cc10_g12140 | |
| 47038 chr10 manual_curation mRNA 21405741 21409242 . + . ID=GSCOCT00031905001;Parent=GSCOCG00031905001;Name=Cc10_g12140 | |
| 47039 chr10 manual_curation polypeptide 21405904 21408689 . + . ID=GSCOCP00031905001;Dbxref=GENE3D:G3DSA:2.40.70.10,InterPro:IPR001461,InterPro:IPR001969,InterPro:IPR009007,InterPro:IPR021109,PANTHER:PTHR13683,PFAM:PF00026,PROSITE:PS00141,SUPERFAMILY:SSF50630,SwissProt:A2ZC67,SwissProt:Q0IU52,SwissProt:Q9S9K4,TAIR:AT1G44130.1,TAIR:AT1G77480.1,TAIR:AT4G33490.2,TrEMBL:B9S2X6,TrEMBL:F6H0K5,TrEMBL:I1MA59;Derives_from=GSCOCT00031905001;Name=Cc10_g12140;Ontology_term=CC_evidence_code:ISS,GO:0004190,GO:0006508,CC_EC_number:missing_EC_number,PRODUCT:Putative Aspartic proteinase Asp1,CC_functional_completeness:complete,CC_gene:ASP1,CC_gene:At1g65240;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031905001~ Putative Aspartic proteinase Asp1~ ASP1~ complete;original_location=join(1136264..1136445%2C1137341..1137458%2C1137562..1137785%2C1137984..1138214%2C1138299..1138437%2C1138514..1138711%2C1138804..1138876%2C1138955..1139049);owner=coffea | |
| 47040 chr10 manual_curation exon 21405741 21406085 . + . Parent=GSCOCT00031905001 | |
| 47041 chr10 manual_curation exon 21406981 21407098 . + . Parent=GSCOCT00031905001 | |
| 47042 chr10 manual_curation exon 21407202 21407425 . + . Parent=GSCOCT00031905001 | |
| 47043 chr10 manual_curation exon 21407624 21407854 . + . Parent=GSCOCT00031905001 | |
| 47044 chr10 manual_curation exon 21407939 21408077 . + . Parent=GSCOCT00031905001 | |
| 47045 chr10 manual_curation exon 21408154 21408351 . + . Parent=GSCOCT00031905001 | |
| 47046 chr10 manual_curation exon 21408444 21408516 . + . Parent=GSCOCT00031905001 | |
| 47047 chr10 manual_curation exon 21408595 21409242 . + . Parent=GSCOCT00031905001 | |
| 47048 chr10 manual_curation CDS 21405904 21406085 . + 0 Parent=GSCOCT00031905001 | |
| 47049 chr10 manual_curation CDS 21406981 21407098 . + 2 Parent=GSCOCT00031905001 | |
| 47050 chr10 manual_curation CDS 21407202 21407425 . + 0 Parent=GSCOCT00031905001 | |
| 47051 chr10 manual_curation CDS 21407624 21407854 . + 2 Parent=GSCOCT00031905001 | |
| 47052 chr10 manual_curation CDS 21407939 21408077 . + 2 Parent=GSCOCT00031905001 | |
| 47053 chr10 manual_curation CDS 21408154 21408351 . + 0 Parent=GSCOCT00031905001 | |
| 47054 chr10 manual_curation CDS 21408444 21408516 . + 0 Parent=GSCOCT00031905001 | |
| 47055 chr10 manual_curation CDS 21408595 21408689 . + 1 Parent=GSCOCT00031905001 | |
| 47056 chr10 manual_curation gene 21409837 21426189 . - . ID=GSCOCG00031906001;Name=Cc10_g12150 | |
| 47057 chr10 manual_curation mRNA 21409837 21426189 . - . ID=GSCOCT00031906001;Parent=GSCOCG00031906001;Name=Cc10_g12150 | |
| 47058 chr10 manual_curation polypeptide 21409837 21426189 . - . ID=GSCOCP00031906001;Dbxref=GENE3D:G3DSA:3.40.850.10,InterPro:IPR001752,InterPro:IPR019821,PFAM:PF00225,PRINTS:PR00380,PROFILE:PS50067,PROSITE:PS00411,SMART:SM00129,SwissProt:Q54NP8,SwissProt:Q6RT24,SwissProt:Q6S001,TAIR:AT1G21730.1,TAIR:AT3G12020.2,TAIR:AT5G06670.1,TrEMBL:B9S2X5,TrEMBL:F6H0K4,TrEMBL:Q01IZ0;Derives_from=GSCOCT00031906001;Name=Cc10_g12150;Ontology_term=CC_evidence_code:ISS,GO:0003777,GO:0005524,GO:0007018,CC_EC_number:missing_EC_number,PRODUCT:P-loop containing nucleoside triphosphate hydrolases superfamily protein,CC_functional_completeness:modules,CC_gene:kif11,CC_gene:kif4,CC_gene:Cenpe;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031906001~ P-loop containing nucleoside triphosphate hydrolases superfamily protein~ kif11~ modules;original_location=complement(join(1156412..1156549%2C1156247..1156300%2C1155245..1155304%2C1153943..1154021%2C1153622..1153689%2C1151986..1152045%2C1151782..1151886%2C1151412..1151516%2C1151142..1151249%2C1150862..1151005%2C1149966..1150133%2C1149637..1149807%2C1148654..1148890%2C1148335..1148475%2C1148073..1148198%2C1146505..1146555%2C1146357..1146404%2C1145974..1146279%2C1145127..1145855%2C1142735..1142824%2C1140197..1140220));owner=coffea | |
| 47059 chr10 manual_curation exon 21409837 21409860 . - . Parent=GSCOCT00031906001 | |
| 47060 chr10 manual_curation exon 21412375 21412464 . - . Parent=GSCOCT00031906001 | |
| 47061 chr10 manual_curation exon 21414767 21415495 . - . Parent=GSCOCT00031906001 | |
| 47062 chr10 manual_curation exon 21415614 21415919 . - . Parent=GSCOCT00031906001 | |
| 47063 chr10 manual_curation exon 21415997 21416044 . - . Parent=GSCOCT00031906001 | |
| 47064 chr10 manual_curation exon 21416145 21416195 . - . Parent=GSCOCT00031906001 | |
| 47065 chr10 manual_curation exon 21417713 21417838 . - . Parent=GSCOCT00031906001 | |
| 47066 chr10 manual_curation exon 21417975 21418115 . - . Parent=GSCOCT00031906001 | |
| 47067 chr10 manual_curation exon 21418294 21418530 . - . Parent=GSCOCT00031906001 | |
| 47068 chr10 manual_curation exon 21419277 21419447 . - . Parent=GSCOCT00031906001 | |
| 47069 chr10 manual_curation exon 21419606 21419773 . - . Parent=GSCOCT00031906001 | |
| 47070 chr10 manual_curation exon 21420502 21420645 . - . Parent=GSCOCT00031906001 | |
| 47071 chr10 manual_curation exon 21420782 21420889 . - . Parent=GSCOCT00031906001 | |
| 47072 chr10 manual_curation exon 21421052 21421156 . - . Parent=GSCOCT00031906001 | |
| 47073 chr10 manual_curation exon 21421422 21421526 . - . Parent=GSCOCT00031906001 | |
| 47074 chr10 manual_curation exon 21421626 21421685 . - . Parent=GSCOCT00031906001 | |
| 47075 chr10 manual_curation exon 21423262 21423329 . - . Parent=GSCOCT00031906001 | |
| 47076 chr10 manual_curation exon 21423583 21423661 . - . Parent=GSCOCT00031906001 | |
| 47077 chr10 manual_curation exon 21424885 21424944 . - . Parent=GSCOCT00031906001 | |
| 47078 chr10 manual_curation exon 21425887 21425940 . - . Parent=GSCOCT00031906001 | |
| 47079 chr10 manual_curation exon 21426052 21426189 . - . Parent=GSCOCT00031906001 | |
| 47080 chr10 manual_curation CDS 21409837 21409860 . - 0 Parent=GSCOCT00031906001 | |
| 47081 chr10 manual_curation CDS 21412375 21412464 . - 0 Parent=GSCOCT00031906001 | |
| 47082 chr10 manual_curation CDS 21414767 21415495 . - 0 Parent=GSCOCT00031906001 | |
| 47083 chr10 manual_curation CDS 21415614 21415919 . - 0 Parent=GSCOCT00031906001 | |
| 47084 chr10 manual_curation CDS 21415997 21416044 . - 0 Parent=GSCOCT00031906001 | |
| 47085 chr10 manual_curation CDS 21416145 21416195 . - 0 Parent=GSCOCT00031906001 | |
| 47086 chr10 manual_curation CDS 21417713 21417838 . - 0 Parent=GSCOCT00031906001 | |
| 47087 chr10 manual_curation CDS 21417975 21418115 . - 0 Parent=GSCOCT00031906001 | |
| 47088 chr10 manual_curation CDS 21418294 21418530 . - 0 Parent=GSCOCT00031906001 | |
| 47089 chr10 manual_curation CDS 21419277 21419447 . - 0 Parent=GSCOCT00031906001 | |
| 47090 chr10 manual_curation CDS 21419606 21419773 . - 0 Parent=GSCOCT00031906001 | |
| 47091 chr10 manual_curation CDS 21420502 21420645 . - 0 Parent=GSCOCT00031906001 | |
| 47092 chr10 manual_curation CDS 21420782 21420889 . - 0 Parent=GSCOCT00031906001 | |
| 47093 chr10 manual_curation CDS 21421052 21421156 . - 0 Parent=GSCOCT00031906001 | |
| 47094 chr10 manual_curation CDS 21421422 21421526 . - 0 Parent=GSCOCT00031906001 | |
| 47095 chr10 manual_curation CDS 21421626 21421685 . - 0 Parent=GSCOCT00031906001 | |
| 47096 chr10 manual_curation CDS 21423262 21423329 . - 1 Parent=GSCOCT00031906001 | |
| 47097 chr10 manual_curation CDS 21423583 21423661 . - 0 Parent=GSCOCT00031906001 | |
| 47098 chr10 manual_curation CDS 21424885 21424944 . - 0 Parent=GSCOCT00031906001 | |
| 47099 chr10 manual_curation CDS 21425887 21425940 . - 0 Parent=GSCOCT00031906001 | |
| 47100 chr10 manual_curation CDS 21426052 21426189 . - 0 Parent=GSCOCT00031906001 | |
| 47101 chr10 manual_curation gene 21433004 21436784 . - . ID=GSCOCG00031907001;Name=Cc10_g12160 | |
| 47102 chr10 manual_curation mRNA 21433004 21436784 . - . ID=GSCOCT00031907001;Parent=GSCOCG00031907001;Name=Cc10_g12160 | |
| 47103 chr10 manual_curation polypeptide 21433004 21436784 . - . ID=GSCOCP00031907001;Dbxref=GENE3D:G3DSA:3.40.850.10,InterPro:IPR001752,PFAM:PF00225,PROFILE:PS50067,SwissProt:O60282,SwissProt:Q2PQA9,SwissProt:Q61768,TAIR:AT1G21730.1,TAIR:AT3G12020.2,TAIR:AT5G06670.1,TrEMBL:F6H0K4,TrEMBL:Q8W5R6,TrEMBL:Q9XI03;Derives_from=GSCOCT00031907001;Name=Cc10_g12160;Ontology_term=CC_evidence_code:ISS,GO:0003777,GO:0005524,GO:0007018,CC_EC_number:missing_EC_number,PRODUCT:P-loop containing nucleoside triphosphate hydrolases superfamily protein,CC_functional_completeness:fragment,CC_gene:Kif5b,CC_gene:KIF5C;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031907001~ P-loop containing nucleoside triphosphate hydrolases superfamily protein~ Kif5b~ fragment;original_location=complement(join(1167031..1167144%2C1166858..1166967%2C1166712..1166769%2C1165124..1165256%2C1163364..1163425));owner=coffea | |
| 47104 chr10 manual_curation exon 21433004 21433065 . - . Parent=GSCOCT00031907001 | |
| 47105 chr10 manual_curation exon 21434764 21434896 . - . Parent=GSCOCT00031907001 | |
| 47106 chr10 manual_curation exon 21436352 21436409 . - . Parent=GSCOCT00031907001 | |
| 47107 chr10 manual_curation exon 21436498 21436607 . - . Parent=GSCOCT00031907001 | |
| 47108 chr10 manual_curation exon 21436671 21436784 . - . Parent=GSCOCT00031907001 | |
| 47109 chr10 manual_curation CDS 21433004 21433065 . - 1 Parent=GSCOCT00031907001 | |
| 47110 chr10 manual_curation CDS 21434764 21434896 . - 0 Parent=GSCOCT00031907001 | |
| 47111 chr10 manual_curation CDS 21436352 21436409 . - 2 Parent=GSCOCT00031907001 | |
| 47112 chr10 manual_curation CDS 21436498 21436607 . - 0 Parent=GSCOCT00031907001 | |
| 47113 chr10 manual_curation CDS 21436671 21436784 . - 0 Parent=GSCOCT00031907001 | |
| 47114 chr10 manual_curation gene 21441395 21448962 . - . ID=GSCOCG00031908001;Name=Cc10_g12170 | |
| 47115 chr10 manual_curation mRNA 21441395 21448962 . - . ID=GSCOCT00031908001;Parent=GSCOCG00031908001;Name=Cc10_g12170 | |
| 47116 chr10 manual_curation polypeptide 21442366 21446725 . - . ID=GSCOCP00031908001;Dbxref=GENE3D:G3DSA:3.40.30.10,InterPro:IPR003782,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR017276,InterPro:IPR017936,PANTHER:PTHR12151,PFAM:PF02630,PIR:PIRSF037736,PROFILE:PS51352,SUPERFAMILY:SSF52833,SwissProt:A1A4J8,SwissProt:O75880,SwissProt:Q8VYP0,TAIR:AT3G08950.1,TAIR:AT4G39740.1,TrEMBL:B9IGB6,TrEMBL:D7SY28,TrEMBL:I1KKG6;Derives_from=GSCOCT00031908001;Name=Cc10_g12170;Ontology_term=CC_evidence_code:ISS,GO:0005507,GO:0005743,GO:0006825,GO:0006878,GO:0008535,GO:0045454,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein SCO1 homolog%2C mitochondrial,CC_functional_completeness:modules,CC_gene:HCC1,CC_gene:SCO1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031908001~ Putative Protein SCO1 homolog%2C mitochondrial~ HCC1~ modules;original_location=complement(join(1176906..1177085%2C1176538..1176735%2C1175683..1175773%2C1175218..1175430%2C1174369..1174458%2C1174104..1174236%2C1172726..1172843));owner=coffea | |
| 47117 chr10 manual_curation exon 21448878 21448962 . - . Parent=GSCOCT00031908001 | |
| 47118 chr10 manual_curation exon 21441395 21442483 . - . Parent=GSCOCT00031908001 | |
| 47119 chr10 manual_curation exon 21443744 21443876 . - . Parent=GSCOCT00031908001 | |
| 47120 chr10 manual_curation exon 21444009 21444098 . - . Parent=GSCOCT00031908001 | |
| 47121 chr10 manual_curation exon 21444858 21445070 . - . Parent=GSCOCT00031908001 | |
| 47122 chr10 manual_curation exon 21445323 21445413 . - . Parent=GSCOCT00031908001 | |
| 47123 chr10 manual_curation exon 21446178 21446375 . - . Parent=GSCOCT00031908001 | |
| 47124 chr10 manual_curation exon 21446546 21446819 . - . Parent=GSCOCT00031908001 | |
| 47125 chr10 manual_curation CDS 21442366 21442483 . - 2 Parent=GSCOCT00031908001 | |
| 47126 chr10 manual_curation CDS 21443744 21443876 . - 1 Parent=GSCOCT00031908001 | |
| 47127 chr10 manual_curation CDS 21444009 21444098 . - 1 Parent=GSCOCT00031908001 | |
| 47128 chr10 manual_curation CDS 21444858 21445070 . - 1 Parent=GSCOCT00031908001 | |
| 47129 chr10 manual_curation CDS 21445323 21445413 . - 0 Parent=GSCOCT00031908001 | |
| 47130 chr10 manual_curation CDS 21446178 21446375 . - 0 Parent=GSCOCT00031908001 | |
| 47131 chr10 manual_curation CDS 21446546 21446725 . - 0 Parent=GSCOCT00031908001 | |
| 47132 chr10 manual_curation gene 21458541 21466121 . + . ID=GSCOCG00031910001;Name=Cc10_g12180 | |
| 47133 chr10 manual_curation mRNA 21458541 21466121 . + . ID=GSCOCT00031910001;Parent=GSCOCG00031910001;Name=Cc10_g12180 | |
| 47134 chr10 manual_curation polypeptide 21458592 21464842 . + . ID=GSCOCP00031910001;Dbxref=InterPro:IPR003593,InterPro:IPR003959,InterPro:IPR008921,InterPro:IPR013748,PFAM:PF00004,PFAM:PF08542,SMART:SM00382,SUPERFAMILY:SSF48019,SwissProt:P40937,SwissProt:Q54ST4,SwissProt:Q9D0F6,TAIR:AT1G21690.3,TAIR:AT1G63160.1,TAIR:AT1G77470.1,TrEMBL:B9GU16,TrEMBL:B9S2X4,TrEMBL:E0CR43;Derives_from=GSCOCT00031910001;Name=Cc10_g12180;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003677,GO:0003689,GO:0005524,GO:0005663,GO:0006260,GO:0017111,CC_EC_number:missing_EC_number,PRODUCT:Replication factor C subunit 5,CC_functional_completeness:complete,CC_gene:Rfc5,CC_gene:RFC5,CC_gene:rfc5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031910001~ Replication factor C subunit 5~ Rfc5~ complete;original_location=join(1188952..1189156%2C1189623..1189839%2C1190429..1190502%2C1190585..1190744%2C1192511..1192592%2C1193348..1193477%2C1193578..1193641%2C1193729..1193797%2C1195103..1195202);owner=coffea | |
| 47135 chr10 manual_curation exon 21458541 21458796 . + . Parent=GSCOCT00031910001 | |
| 47136 chr10 manual_curation exon 21459263 21459479 . + . Parent=GSCOCT00031910001 | |
| 47137 chr10 manual_curation exon 21460069 21460142 . + . Parent=GSCOCT00031910001 | |
| 47138 chr10 manual_curation exon 21460225 21460384 . + . Parent=GSCOCT00031910001 | |
| 47139 chr10 manual_curation exon 21462151 21462232 . + . Parent=GSCOCT00031910001 | |
| 47140 chr10 manual_curation exon 21462988 21463117 . + . Parent=GSCOCT00031910001 | |
| 47141 chr10 manual_curation exon 21463218 21463281 . + . Parent=GSCOCT00031910001 | |
| 47142 chr10 manual_curation exon 21463369 21463437 . + . Parent=GSCOCT00031910001 | |
| 47143 chr10 manual_curation exon 21464743 21466121 . + . Parent=GSCOCT00031910001 | |
| 47144 chr10 manual_curation CDS 21458592 21458796 . + 0 Parent=GSCOCT00031910001 | |
| 47145 chr10 manual_curation CDS 21459263 21459479 . + 1 Parent=GSCOCT00031910001 | |
| 47146 chr10 manual_curation CDS 21460069 21460142 . + 2 Parent=GSCOCT00031910001 | |
| 47147 chr10 manual_curation CDS 21460225 21460384 . + 1 Parent=GSCOCT00031910001 | |
| 47148 chr10 manual_curation CDS 21462151 21462232 . + 2 Parent=GSCOCT00031910001 | |
| 47149 chr10 manual_curation CDS 21462988 21463117 . + 0 Parent=GSCOCT00031910001 | |
| 47150 chr10 manual_curation CDS 21463218 21463281 . + 1 Parent=GSCOCT00031910001 | |
| 47151 chr10 manual_curation CDS 21463369 21463437 . + 2 Parent=GSCOCT00031910001 | |
| 47152 chr10 manual_curation CDS 21464743 21464842 . + 2 Parent=GSCOCT00031910001 | |
| 47153 chr10 manual_curation gene 21466378 21475591 . - . ID=GSCOCG00031911001;Name=Cc10_g12190 | |
| 47154 chr10 manual_curation mRNA 21466378 21475591 . - . ID=GSCOCT00031911001;Parent=GSCOCG00031911001;Name=Cc10_g12190 | |
| 47155 chr10 manual_curation polypeptide 21466378 21475049 . - . ID=GSCOCP00031911001;Dbxref=GENE3D:G3DSA:1.25.10.10,InterPro:IPR000008,InterPro:IPR000225,InterPro:IPR008973,InterPro:IPR011989,InterPro:IPR016024,InterPro:IPR018029,PFAM:PF00168,PFAM:PF00514,PROFILE:PS50004,PROFILE:PS50176,SMART:SM00185,SMART:SM00239,SUPERFAMILY:SSF48371,SUPERFAMILY:SSF49562,TAIR:AT1G44120.1,TAIR:AT1G77460.1,TAIR:AT2G22125.1,TrEMBL:B9H7H1,TrEMBL:F6H0K3,TrEMBL:I1JFT8;Derives_from=GSCOCT00031911001;Name=Cc10_g12190;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:Armadillo/beta-catenin-like repeat %3B C2 calcium/lipid-binding domain (CaLB) protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031911001~ Armadillo/beta-catenin-like repeat %3B C2 calcium/lipid-binding domain (CaLB) protein~ unknown_gene~ complete;original_location=complement(join(1205345..1205409%2C1202037..1205100%2C1198760..1201304%2C1197915..1198369%2C1197272..1197388%2C1196738..1196899));owner=coffea | |
| 47156 chr10 manual_curation exon 21475499 21475591 . - . Parent=GSCOCT00031911001 | |
| 47157 chr10 manual_curation exon 21466378 21466539 . - . Parent=GSCOCT00031911001 | |
| 47158 chr10 manual_curation exon 21466912 21467028 . - . Parent=GSCOCT00031911001 | |
| 47159 chr10 manual_curation exon 21467555 21468009 . - . Parent=GSCOCT00031911001 | |
| 47160 chr10 manual_curation exon 21468400 21470944 . - . Parent=GSCOCT00031911001 | |
| 47161 chr10 manual_curation exon 21471677 21474740 . - . Parent=GSCOCT00031911001 | |
| 47162 chr10 manual_curation exon 21474985 21475088 . - . Parent=GSCOCT00031911001 | |
| 47163 chr10 manual_curation CDS 21466378 21466539 . - 0 Parent=GSCOCT00031911001 | |
| 47164 chr10 manual_curation CDS 21466912 21467028 . - 0 Parent=GSCOCT00031911001 | |
| 47165 chr10 manual_curation CDS 21467555 21468009 . - 1 Parent=GSCOCT00031911001 | |
| 47166 chr10 manual_curation CDS 21468400 21470944 . - 0 Parent=GSCOCT00031911001 | |
| 47167 chr10 manual_curation CDS 21471677 21474740 . - 2 Parent=GSCOCT00031911001 | |
| 47168 chr10 manual_curation CDS 21474985 21475049 . - 0 Parent=GSCOCT00031911001 | |
| 47169 chr10 manual_curation gene 21488496 21490449 . - . ID=GSCOCG00031913001;Name=Cc10_g12200 | |
| 47170 chr10 manual_curation mRNA 21488496 21490449 . - . ID=GSCOCT00031913001;Parent=GSCOCG00031913001;Name=Cc10_g12200 | |
| 47171 chr10 manual_curation polypeptide 21488956 21490324 . - . ID=GSCOCP00031913001;Dbxref=InterPro:IPR003441,PFAM:PF02365,PROFILE:PS51005,SUPERFAMILY:SSF101941,SwissProt:Q39013,SwissProt:Q7F2L3,SwissProt:Q8H115,TAIR:AT1G01720.1,TAIR:AT1G77450.1,TAIR:AT5G63790.1,TrEMBL:B5TV65,TrEMBL:B9S2X2,TrEMBL:Q8LRL5;Derives_from=GSCOCT00031913001;Name=Cc10_g12200;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:NAC domain-containing protein 2,CC_functional_completeness:complete,CC_gene:NAC002,CC_gene:NAC48,CC_gene:NAC102;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031913001~ NAC domain-containing protein 2~ NAC002~ complete;original_location=complement(join(1220525..1220684%2C1220116..1220396%2C1219316..1219804));owner=coffea | |
| 47172 chr10 manual_curation exon 21488496 21489444 . - . Parent=GSCOCT00031913001 | |
| 47173 chr10 manual_curation exon 21489756 21490036 . - . Parent=GSCOCT00031913001 | |
| 47174 chr10 manual_curation exon 21490165 21490449 . - . Parent=GSCOCT00031913001 | |
| 47175 chr10 manual_curation CDS 21488956 21489444 . - 0 Parent=GSCOCT00031913001 | |
| 47176 chr10 manual_curation CDS 21489756 21490036 . - 1 Parent=GSCOCT00031913001 | |
| 47177 chr10 manual_curation CDS 21490165 21490324 . - 0 Parent=GSCOCT00031913001 | |
| 47178 chr10 manual_curation gene 21516378 21518682 . - . ID=GSCOCG00031915001;Name=Cc10_g12210 | |
| 47179 chr10 manual_curation mRNA 21516378 21518682 . - . ID=GSCOCT00031915001;Parent=GSCOCG00031915001;Name=Cc10_g12210 | |
| 47180 chr10 manual_curation polypeptide 21516553 21518365 . - . ID=GSCOCP00031915001;Dbxref=TAIR:AT1G21722.1,TAIR:AT1G78922.1,TrEMBL:B9H7H4,TrEMBL:D7KKT6,TrEMBL:E0CR39;Derives_from=GSCOCT00031915001;Name=Cc10_g12210;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031915001~ Putative unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78922.1)%3B Has 47 Blast hits to 47 proteins in 13 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 1%3B Fungi - 1%3B Plants - 42%3B Viruses - 0%3B Other Eukaryotes - 3 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(1248628..1248725%2C1248405..1248505%2C1246913..1247427));owner=coffea | |
| 47181 chr10 manual_curation exon 21518531 21518682 . - . Parent=GSCOCT00031915001 | |
| 47182 chr10 manual_curation exon 21516378 21517067 . - . Parent=GSCOCT00031915001 | |
| 47183 chr10 manual_curation exon 21518045 21518145 . - . Parent=GSCOCT00031915001 | |
| 47184 chr10 manual_curation exon 21518268 21518446 . - . Parent=GSCOCT00031915001 | |
| 47185 chr10 manual_curation CDS 21516553 21517067 . - 1 Parent=GSCOCT00031915001 | |
| 47186 chr10 manual_curation CDS 21518045 21518145 . - 2 Parent=GSCOCT00031915001 | |
| 47187 chr10 manual_curation CDS 21518268 21518365 . - 0 Parent=GSCOCT00031915001 | |
| 47188 chr10 manual_curation gene 21525553 21526290 . + . ID=GSCOCG00031918001;Name=Cc10_g12220 | |
| 47189 chr10 manual_curation mRNA 21525553 21526290 . + . ID=GSCOCT00031918001;Parent=GSCOCG00031918001;Name=Cc10_g12220 | |
| 47190 chr10 manual_curation polypeptide 21525553 21526290 . + . ID=GSCOCP00031918001;Dbxref=InterPro:IPR004864,PFAM:PF03168,TAIR:AT2G46150.1,TrEMBL:B9RIQ7,TrEMBL:F6H6K8,TrEMBL:F6H6K9;Derives_from=GSCOCT00031918001;Name=Cc10_g12220;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031918001~ Putative uncharacterized protein~ unknown_gene~ modules;original_location=1255913..1256650;owner=coffea | |
| 47191 chr10 manual_curation exon 21525553 21526290 . + . Parent=GSCOCT00031918001 | |
| 47192 chr10 manual_curation CDS 21525553 21526290 . + 0 Parent=GSCOCT00031918001 | |
| 47193 chr10 manual_curation gene 21533587 21534249 . + . ID=GSCOCG00031920001;Name=Cc10_g12230 | |
| 47194 chr10 manual_curation mRNA 21533587 21534249 . + . ID=GSCOCT00031920001;Parent=GSCOCG00031920001;Name=Cc10_g12230 | |
| 47195 chr10 manual_curation polypeptide 21533587 21534249 . + . ID=GSCOCP00031920001;Dbxref=InterPro:IPR004864,PFAM:PF03168,TAIR:AT1G64065.1,TAIR:AT2G46150.1,TrEMBL:B9RIQ7,TrEMBL:F6H6K8,TrEMBL:F6H6K9;Derives_from=GSCOCT00031920001;Name=Cc10_g12230;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031920001~ Putative Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family~ unknown_gene~ complete;original_location=1263947..1264609;owner=coffea | |
| 47196 chr10 manual_curation exon 21533587 21534249 . + . Parent=GSCOCT00031920001 | |
| 47197 chr10 manual_curation CDS 21533587 21534249 . + 0 Parent=GSCOCT00031920001 | |
| 47198 chr10 manual_curation gene 21568827 21575038 . - . ID=GSCOCG00031922001;Name=Cc10_g12240 | |
| 47199 chr10 manual_curation mRNA 21568827 21575038 . - . ID=GSCOCT00031922001;Parent=GSCOCG00031922001;Name=Cc10_g12240 | |
| 47200 chr10 manual_curation polypeptide 21569210 21574917 . - . ID=GSCOCP00031922001;Dbxref=InterPro:IPR001353,InterPro:IPR016050,PFAM:PF00227,PROSITE:PS00854,SwissProt:O65084,SwissProt:O81153,SwissProt:Q9XI05,TAIR:AT1G21720.1,TAIR:AT1G77440.1,TAIR:AT3G60820.1,TrEMBL:C6SXW4,TrEMBL:E0CR38,TrEMBL:G7L4S2;Derives_from=GSCOCT00031922001;Name=Cc10_g12240;Ontology_term=CC_evidence_code:ISS,GO:0004175,GO:0004298,GO:0005839,GO:0051603,CC_EC_number:3.4.25.1,PRODUCT:Proteasome subunit beta type-3-A,CC_functional_completeness:complete,CC_gene:PBC1,CC_gene:PBC2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031922001~ Proteasome subunit beta type-3-A~ PBC1~ complete;original_location=complement(join(1305272..1305277%2C1304962..1305143%2C1304368..1304475%2C1302844..1302933%2C1301418..1301502%2C1299781..1299875%2C1299570..1299618));owner=coffea | |
| 47201 chr10 manual_curation exon 21568827 21569258 . - . Parent=GSCOCT00031922001 | |
| 47202 chr10 manual_curation exon 21569421 21569515 . - . Parent=GSCOCT00031922001 | |
| 47203 chr10 manual_curation exon 21571058 21571142 . - . Parent=GSCOCT00031922001 | |
| 47204 chr10 manual_curation exon 21572484 21572573 . - . Parent=GSCOCT00031922001 | |
| 47205 chr10 manual_curation exon 21574008 21574115 . - . Parent=GSCOCT00031922001 | |
| 47206 chr10 manual_curation exon 21574602 21574783 . - . Parent=GSCOCT00031922001 | |
| 47207 chr10 manual_curation exon 21574912 21575038 . - . Parent=GSCOCT00031922001 | |
| 47208 chr10 manual_curation CDS 21569210 21569258 . - 2 Parent=GSCOCT00031922001 | |
| 47209 chr10 manual_curation CDS 21569421 21569515 . - 0 Parent=GSCOCT00031922001 | |
| 47210 chr10 manual_curation CDS 21571058 21571142 . - 2 Parent=GSCOCT00031922001 | |
| 47211 chr10 manual_curation CDS 21572484 21572573 . - 2 Parent=GSCOCT00031922001 | |
| 47212 chr10 manual_curation CDS 21574008 21574115 . - 2 Parent=GSCOCT00031922001 | |
| 47213 chr10 manual_curation CDS 21574602 21574783 . - 0 Parent=GSCOCT00031922001 | |
| 47214 chr10 manual_curation CDS 21574912 21574917 . - 0 Parent=GSCOCT00031922001 | |
| 47215 chr10 manual_curation gene 21587697 21596948 . + . ID=GSCOCG00031923001;Name=Cc10_g12250 | |
| 47216 chr10 manual_curation mRNA 21587697 21596948 . + . ID=GSCOCT00031923001;Parent=GSCOCG00031923001;Name=Cc10_g12250 | |
| 47217 chr10 manual_curation polypeptide 21587697 21596378 . + . ID=GSCOCP00031923001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR001944,InterPro:IPR008979,InterPro:IPR013781,InterPro:IPR017853,InterPro:IPR019801,PANTHER:PTHR23421,PFAM:PF01301,PRINTS:PR00742,PROSITE:PS01182,SUPERFAMILY:SSF49785,SUPERFAMILY:SSF51445,SwissProt:Q75HQ3,SwissProt:Q8GX69,SwissProt:Q9FFN4,TAIR:AT1G77410.1,TAIR:AT4G36360.1,TAIR:AT5G63800.1,TrEMBL:B9H7H6,TrEMBL:E0CR37,TrEMBL:F6H0K0;Derives_from=GSCOCT00031923001;Name=Cc10_g12250;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0043169,CC_EC_number:3.2.1.23,PRODUCT:Beta-galactosidase 16,CC_functional_completeness:complete,CC_gene:BGAL16,CC_gene:BGAL6,CC_gene:Os05g0428100;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031923001~ Beta-galactosidase 16~ BGAL16~ complete;original_location=join(1318057..1318227%2C1320286..1320381%2C1320468..1320580%2C1320917..1320983%2C1321255..1321347%2C1321436..1321579%2C1321858..1321952%2C1322033..1322141%2C1322392..1322476%2C1322571..1322689%2C1322891..1323061%2C1323364..1323545%2C1324312..1324397%2C1324709..1324818%2C1325340..1325444%2C1325764..1325868%2C1326286..1326431%2C1326618..1326738);owner=coffea | |
| 47218 chr10 manual_curation exon 21587697 21587867 . + . Parent=GSCOCT00031923001 | |
| 47219 chr10 manual_curation exon 21589926 21590021 . + . Parent=GSCOCT00031923001 | |
| 47220 chr10 manual_curation exon 21590108 21590220 . + . Parent=GSCOCT00031923001 | |
| 47221 chr10 manual_curation exon 21590557 21590623 . + . Parent=GSCOCT00031923001 | |
| 47222 chr10 manual_curation exon 21590895 21590987 . + . Parent=GSCOCT00031923001 | |
| 47223 chr10 manual_curation exon 21591076 21591219 . + . Parent=GSCOCT00031923001 | |
| 47224 chr10 manual_curation exon 21591498 21591592 . + . Parent=GSCOCT00031923001 | |
| 47225 chr10 manual_curation exon 21591673 21591781 . + . Parent=GSCOCT00031923001 | |
| 47226 chr10 manual_curation exon 21592032 21592116 . + . Parent=GSCOCT00031923001 | |
| 47227 chr10 manual_curation exon 21592211 21592329 . + . Parent=GSCOCT00031923001 | |
| 47228 chr10 manual_curation exon 21592531 21592701 . + . Parent=GSCOCT00031923001 | |
| 47229 chr10 manual_curation exon 21593004 21593185 . + . Parent=GSCOCT00031923001 | |
| 47230 chr10 manual_curation exon 21593952 21594037 . + . Parent=GSCOCT00031923001 | |
| 47231 chr10 manual_curation exon 21594349 21594458 . + . Parent=GSCOCT00031923001 | |
| 47232 chr10 manual_curation exon 21594980 21595084 . + . Parent=GSCOCT00031923001 | |
| 47233 chr10 manual_curation exon 21595404 21595508 . + . Parent=GSCOCT00031923001 | |
| 47234 chr10 manual_curation exon 21595926 21596071 . + . Parent=GSCOCT00031923001 | |
| 47235 chr10 manual_curation exon 21596258 21596948 . + . Parent=GSCOCT00031923001 | |
| 47236 chr10 manual_curation CDS 21587697 21587867 . + 0 Parent=GSCOCT00031923001 | |
| 47237 chr10 manual_curation CDS 21589926 21590021 . + 0 Parent=GSCOCT00031923001 | |
| 47238 chr10 manual_curation CDS 21590108 21590220 . + 0 Parent=GSCOCT00031923001 | |
| 47239 chr10 manual_curation CDS 21590557 21590623 . + 2 Parent=GSCOCT00031923001 | |
| 47240 chr10 manual_curation CDS 21590895 21590987 . + 0 Parent=GSCOCT00031923001 | |
| 47241 chr10 manual_curation CDS 21591076 21591219 . + 0 Parent=GSCOCT00031923001 | |
| 47242 chr10 manual_curation CDS 21591498 21591592 . + 0 Parent=GSCOCT00031923001 | |
| 47243 chr10 manual_curation CDS 21591673 21591781 . + 2 Parent=GSCOCT00031923001 | |
| 47244 chr10 manual_curation CDS 21592032 21592116 . + 0 Parent=GSCOCT00031923001 | |
| 47245 chr10 manual_curation CDS 21592211 21592329 . + 1 Parent=GSCOCT00031923001 | |
| 47246 chr10 manual_curation CDS 21592531 21592701 . + 0 Parent=GSCOCT00031923001 | |
| 47247 chr10 manual_curation CDS 21593004 21593185 . + 0 Parent=GSCOCT00031923001 | |
| 47248 chr10 manual_curation CDS 21593952 21594037 . + 2 Parent=GSCOCT00031923001 | |
| 47249 chr10 manual_curation CDS 21594349 21594458 . + 1 Parent=GSCOCT00031923001 | |
| 47250 chr10 manual_curation CDS 21594980 21595084 . + 0 Parent=GSCOCT00031923001 | |
| 47251 chr10 manual_curation CDS 21595404 21595508 . + 0 Parent=GSCOCT00031923001 | |
| 47252 chr10 manual_curation CDS 21595926 21596071 . + 0 Parent=GSCOCT00031923001 | |
| 47253 chr10 manual_curation CDS 21596258 21596378 . + 2 Parent=GSCOCT00031923001 | |
| 47254 chr10 manual_curation gene 21613042 21622888 . + . ID=GSCOCG00031924001;Name=Cc10_g12260 | |
| 47255 chr10 manual_curation mRNA 21613042 21622888 . + . ID=GSCOCT00031924001;Parent=GSCOCG00031924001;Name=Cc10_g12260 | |
| 47256 chr10 manual_curation polypeptide 21613119 21622613 . + . ID=GSCOCP00031924001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR001944,InterPro:IPR008979,InterPro:IPR013781,InterPro:IPR017853,InterPro:IPR019801,PANTHER:PTHR23421,PFAM:PF01301,PRINTS:PR00742,PROSITE:PS01182,SUPERFAMILY:SSF49785,SUPERFAMILY:SSF51445,SwissProt:Q75HQ3,SwissProt:Q8GX69,SwissProt:Q9FFN4,TAIR:AT1G77410.1,TAIR:AT4G36360.1,TAIR:AT5G63800.1,TrEMBL:B9S709,TrEMBL:E0CR37,TrEMBL:F6H0K0;Derives_from=GSCOCT00031924001;Name=Cc10_g12260;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0043169,CC_EC_number:3.2.1.23,PRODUCT:Beta-galactosidase 16,CC_functional_completeness:complete,CC_gene:BGAL16,CC_gene:BGAL6,CC_gene:Os05g0428100;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031924001~ Beta-galactosidase 16~ BGAL16~ complete;original_location=join(1343479..1343643%2C1346651..1346746%2C1346826..1346932%2C1347183..1347249%2C1347489..1347581%2C1347655..1347798%2C1348066..1348160%2C1348256..1348364%2C1348572..1348656%2C1348729..1348847%2C1349041..1349209%2C1349481..1349685%2C1350276..1350361%2C1350761..1350870%2C1351274..1351378%2C1351693..1351770%2C1352250..1352395%2C1352790..1352973);owner=coffea | |
| 47257 chr10 manual_curation exon 21613042 21613283 . + . Parent=GSCOCT00031924001 | |
| 47258 chr10 manual_curation exon 21616291 21616386 . + . Parent=GSCOCT00031924001 | |
| 47259 chr10 manual_curation exon 21616466 21616572 . + . Parent=GSCOCT00031924001 | |
| 47260 chr10 manual_curation exon 21616823 21616889 . + . Parent=GSCOCT00031924001 | |
| 47261 chr10 manual_curation exon 21617129 21617221 . + . Parent=GSCOCT00031924001 | |
| 47262 chr10 manual_curation exon 21617295 21617438 . + . Parent=GSCOCT00031924001 | |
| 47263 chr10 manual_curation exon 21617706 21617800 . + . Parent=GSCOCT00031924001 | |
| 47264 chr10 manual_curation exon 21617896 21618004 . + . Parent=GSCOCT00031924001 | |
| 47265 chr10 manual_curation exon 21618212 21618296 . + . Parent=GSCOCT00031924001 | |
| 47266 chr10 manual_curation exon 21618369 21618487 . + . Parent=GSCOCT00031924001 | |
| 47267 chr10 manual_curation exon 21618681 21618849 . + . Parent=GSCOCT00031924001 | |
| 47268 chr10 manual_curation exon 21619121 21619325 . + . Parent=GSCOCT00031924001 | |
| 47269 chr10 manual_curation exon 21619916 21620001 . + . Parent=GSCOCT00031924001 | |
| 47270 chr10 manual_curation exon 21620401 21620510 . + . Parent=GSCOCT00031924001 | |
| 47271 chr10 manual_curation exon 21620914 21621018 . + . Parent=GSCOCT00031924001 | |
| 47272 chr10 manual_curation exon 21621333 21621410 . + . Parent=GSCOCT00031924001 | |
| 47273 chr10 manual_curation exon 21621890 21622035 . + . Parent=GSCOCT00031924001 | |
| 47274 chr10 manual_curation exon 21622430 21622888 . + . Parent=GSCOCT00031924001 | |
| 47275 chr10 manual_curation CDS 21613119 21613283 . + 0 Parent=GSCOCT00031924001 | |
| 47276 chr10 manual_curation CDS 21616291 21616386 . + 0 Parent=GSCOCT00031924001 | |
| 47277 chr10 manual_curation CDS 21616466 21616572 . + 0 Parent=GSCOCT00031924001 | |
| 47278 chr10 manual_curation CDS 21616823 21616889 . + 2 Parent=GSCOCT00031924001 | |
| 47279 chr10 manual_curation CDS 21617129 21617221 . + 0 Parent=GSCOCT00031924001 | |
| 47280 chr10 manual_curation CDS 21617295 21617438 . + 0 Parent=GSCOCT00031924001 | |
| 47281 chr10 manual_curation CDS 21617706 21617800 . + 0 Parent=GSCOCT00031924001 | |
| 47282 chr10 manual_curation CDS 21617896 21618004 . + 2 Parent=GSCOCT00031924001 | |
| 47283 chr10 manual_curation CDS 21618212 21618296 . + 0 Parent=GSCOCT00031924001 | |
| 47284 chr10 manual_curation CDS 21618369 21618487 . + 1 Parent=GSCOCT00031924001 | |
| 47285 chr10 manual_curation CDS 21618681 21618849 . + 0 Parent=GSCOCT00031924001 | |
| 47286 chr10 manual_curation CDS 21619121 21619325 . + 1 Parent=GSCOCT00031924001 | |
| 47287 chr10 manual_curation CDS 21619916 21620001 . + 2 Parent=GSCOCT00031924001 | |
| 47288 chr10 manual_curation CDS 21620401 21620510 . + 1 Parent=GSCOCT00031924001 | |
| 47289 chr10 manual_curation CDS 21620914 21621018 . + 0 Parent=GSCOCT00031924001 | |
| 47290 chr10 manual_curation CDS 21621333 21621410 . + 0 Parent=GSCOCT00031924001 | |
| 47291 chr10 manual_curation CDS 21621890 21622035 . + 0 Parent=GSCOCT00031924001 | |
| 47292 chr10 manual_curation CDS 21622430 21622613 . + 2 Parent=GSCOCT00031924001 | |
| 47293 chr10 manual_curation gene 21628684 21630135 . - . ID=GSCOCG00031925001;Name=Cc10_g12270 | |
| 47294 chr10 manual_curation mRNA 21628684 21630135 . - . ID=GSCOCT00031925001;Parent=GSCOCG00031925001;Name=Cc10_g12270 | |
| 47295 chr10 manual_curation polypeptide 21628684 21630135 . - . ID=GSCOCP00031925001;Dbxref=InterPro:IPR006094,InterPro:IPR012951,InterPro:IPR016166,PFAM:PF01565,PFAM:PF08031,PROFILE:PS51387,SUPERFAMILY:SSF56176,SwissProt:P30986,SwissProt:P93479,SwissProt:Q9SVG4,TAIR:AT2G34790.1,TAIR:AT5G44390.1,TAIR:AT5G44400.1,TrEMBL:B9T6Q5,TrEMBL:F1T162,TrEMBL:I1NID0;Derives_from=GSCOCT00031925001;Name=Cc10_g12270;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0016491,GO:0050660,CC_EC_number:1.21.3.3,PRODUCT:Putative Reticuline oxidase,CC_functional_completeness:complete,CC_gene:BBE1,CC_gene:At4g20830;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031925001~ Putative Reticuline oxidase~ BBE1~ complete;original_location=complement(1359044..1360495);owner=coffea | |
| 47296 chr10 manual_curation exon 21628684 21630135 . - . Parent=GSCOCT00031925001 | |
| 47297 chr10 manual_curation CDS 21628684 21630135 . - 0 Parent=GSCOCT00031925001 | |
| 47298 chr10 manual_curation gene 21639611 21641170 . + . ID=GSCOCG00031927001;Name=Cc10_g12280 | |
| 47299 chr10 manual_curation mRNA 21639611 21641170 . + . ID=GSCOCT00031927001;Parent=GSCOCG00031927001;Name=Cc10_g12280 | |
| 47300 chr10 manual_curation polypeptide 21639611 21640096 . + . ID=GSCOCP00031927001;Dbxref=InterPro:IPR001944,PANTHER:PTHR23421;Derives_from=GSCOCT00031927001;Name=Cc10_g12280;Ontology_term=CC_evidence_code:ISS,GO:0005975,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031927001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(1369971..1370051%2C1370331..1370456);owner=coffea | |
| 47301 chr10 manual_curation exon 21639611 21639691 . + . Parent=GSCOCT00031927001 | |
| 47302 chr10 manual_curation exon 21639971 21641170 . + . Parent=GSCOCT00031927001 | |
| 47303 chr10 manual_curation CDS 21639611 21639691 . + 0 Parent=GSCOCT00031927001 | |
| 47304 chr10 manual_curation CDS 21639971 21640096 . + 0 Parent=GSCOCT00031927001 | |
| 47305 chr10 manual_curation gene 21642405 21647524 . - . ID=GSCOCG00031929001;Name=Cc10_g12290 | |
| 47306 chr10 manual_curation mRNA 21642405 21647524 . - . ID=GSCOCT00031929001;Parent=GSCOCG00031929001;Name=Cc10_g12290 | |
| 47307 chr10 manual_curation polypeptide 21642747 21647524 . - . ID=GSCOCP00031929001;Dbxref=InterPro:IPR003265,InterPro:IPR011257,InterPro:IPR012294,InterPro:IPR012904,PFAM:PF00730,PFAM:PF07934,SMART:SM00478,SUPERFAMILY:SSF48150,SUPERFAMILY:SSF55945,SwissProt:O08760,SwissProt:O15527,SwissProt:O70249,TAIR:AT1G21710.1,TrEMBL:B9S2W7,TrEMBL:F6H0J9,TrEMBL:I1KAC6;Derives_from=GSCOCT00031929001;Name=Cc10_g12290;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003684,GO:0003824,GO:0006281,GO:0006284,GO:0006289,GO:0008534,CC_EC_number:4.2.99.18,PRODUCT:Putative N-glycosylase/DNA lyase,CC_functional_completeness:modules,CC_gene:Ogg1,CC_gene:OGG1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031929001~ Putative N-glycosylase/DNA lyase~ Ogg1~ modules;original_location=complement(join(1377097..1377884%2C1374722..1374932%2C1373742..1373988%2C1373107..1373135));owner=coffea | |
| 47308 chr10 manual_curation exon 21642405 21642775 . - . Parent=GSCOCT00031929001 | |
| 47309 chr10 manual_curation exon 21643382 21643628 . - . Parent=GSCOCT00031929001 | |
| 47310 chr10 manual_curation exon 21644362 21644572 . - . Parent=GSCOCT00031929001 | |
| 47311 chr10 manual_curation exon 21646737 21647524 . - . Parent=GSCOCT00031929001 | |
| 47312 chr10 manual_curation CDS 21642747 21642775 . - 1 Parent=GSCOCT00031929001 | |
| 47313 chr10 manual_curation CDS 21643382 21643628 . - 0 Parent=GSCOCT00031929001 | |
| 47314 chr10 manual_curation CDS 21644362 21644572 . - 2 Parent=GSCOCT00031929001 | |
| 47315 chr10 manual_curation CDS 21646737 21647524 . - 0 Parent=GSCOCT00031929001 | |
| 47316 chr10 manual_curation gene 21668627 21679717 . + . ID=GSCOCG00031930001;Name=Cc10_g12300 | |
| 47317 chr10 manual_curation mRNA 21668627 21679717 . + . ID=GSCOCT00031930001;Parent=GSCOCG00031930001;Name=Cc10_g12300 | |
| 47318 chr10 manual_curation polypeptide 21668855 21679143 . + . ID=GSCOCP00031930001;Dbxref=InterPro:IPR001005,InterPro:IPR007526,InterPro:IPR009057,InterPro:IPR014778,InterPro:IPR017884,PFAM:PF00249,PFAM:PF04433,PROFILE:PS50934,PROFILE:PS51293,SMART:SM00717,SUPERFAMILY:SSF46689,SwissProt:O14470,SwissProt:Q8VY05,SwissProt:Q9XI07,TAIR:AT1G21700.1,TAIR:AT2G47620.1,TAIR:AT4G34430.4,TrEMBL:B9H7H8,TrEMBL:B9S2W6,TrEMBL:D7KKT3;Derives_from=GSCOCT00031930001;Name=Cc10_g12300;Ontology_term=CC_evidence_code:ISS,GO:0003677,CC_EC_number:missing_EC_number,PRODUCT:SWI/SNF complex subunit SWI3C,CC_functional_completeness:complete,CC_gene:SWI3C,CC_gene:SWI3D,CC_gene:ssr2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031930001~ SWI/SNF complex subunit SWI3C~ SWI3C~ complete;original_location=join(1399215..1399233%2C1399347..1399901%2C1400688..1401226%2C1404486..1404849%2C1404963..1405036%2C1406936..1407063%2C1408172..1408227%2C1408297..1408475%2C1409042..1409503);owner=coffea | |
| 47319 chr10 manual_curation exon 21668627 21668873 . + . Parent=GSCOCT00031930001 | |
| 47320 chr10 manual_curation exon 21668987 21669541 . + . Parent=GSCOCT00031930001 | |
| 47321 chr10 manual_curation exon 21670328 21670866 . + . Parent=GSCOCT00031930001 | |
| 47322 chr10 manual_curation exon 21674126 21674489 . + . Parent=GSCOCT00031930001 | |
| 47323 chr10 manual_curation exon 21674603 21674676 . + . Parent=GSCOCT00031930001 | |
| 47324 chr10 manual_curation exon 21676576 21676703 . + . Parent=GSCOCT00031930001 | |
| 47325 chr10 manual_curation exon 21677812 21677867 . + . Parent=GSCOCT00031930001 | |
| 47326 chr10 manual_curation exon 21677937 21678115 . + . Parent=GSCOCT00031930001 | |
| 47327 chr10 manual_curation exon 21678682 21679717 . + . Parent=GSCOCT00031930001 | |
| 47328 chr10 manual_curation CDS 21668855 21668873 . + 0 Parent=GSCOCT00031930001 | |
| 47329 chr10 manual_curation CDS 21668987 21669541 . + 1 Parent=GSCOCT00031930001 | |
| 47330 chr10 manual_curation CDS 21670328 21670866 . + 1 Parent=GSCOCT00031930001 | |
| 47331 chr10 manual_curation CDS 21674126 21674489 . + 0 Parent=GSCOCT00031930001 | |
| 47332 chr10 manual_curation CDS 21674603 21674676 . + 1 Parent=GSCOCT00031930001 | |
| 47333 chr10 manual_curation CDS 21676576 21676703 . + 0 Parent=GSCOCT00031930001 | |
| 47334 chr10 manual_curation CDS 21677812 21677867 . + 2 Parent=GSCOCT00031930001 | |
| 47335 chr10 manual_curation CDS 21677937 21678115 . + 1 Parent=GSCOCT00031930001 | |
| 47336 chr10 manual_curation CDS 21678682 21679143 . + 0 Parent=GSCOCT00031930001 | |
| 47337 chr10 manual_curation gene 21701855 21705459 . + . ID=GSCOCG00031932001;Name=Cc10_g12310 | |
| 47338 chr10 manual_curation mRNA 21701855 21705459 . + . ID=GSCOCT00031932001;Parent=GSCOCG00031932001;Name=Cc10_g12310 | |
| 47339 chr10 manual_curation polypeptide 21701970 21704886 . + . ID=GSCOCP00031932001;Dbxref=GENE3D:G3DSA:1.10.600.10,InterPro:IPR001906,InterPro:IPR005630,InterPro:IPR008930,InterPro:IPR008949,PFAM:PF01397,PFAM:PF03936,SUPERFAMILY:SSF48239,SUPERFAMILY:SSF48576,SwissProt:Q5SBP1,SwissProt:Q5SBP2,SwissProt:Q93X23,TAIR:AT3G25810.1,TAIR:AT3G25820.1,TAIR:AT3G25830.1,TrEMBL:F6HV95,TrEMBL:Q6PWU1,TrEMBL:Q6PWU2;Derives_from=GSCOCT00031932001;Name=Cc10_g12310;Ontology_term=CC_evidence_code:ISS,GO:0000287,GO:0008152,GO:0016829,CC_EC_number:4.2.3.11,PRODUCT:Myrcene synthase%2C chloroplastic,CC_functional_completeness:complete,CC_gene:MYS,CC_gene:FES;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031932001~ Myrcene synthase%2C chloroplastic~ MYS~ complete;original_location=join(1432330..1432560%2C1432657..1432924%2C1433037..1433424%2C1433530..1433748%2C1433930..1434068%2C1434159..1434215%2C1434318..1434413%2C1434947..1435246);owner=coffea | |
| 47340 chr10 manual_curation exon 21701855 21702200 . + . Parent=GSCOCT00031932001 | |
| 47341 chr10 manual_curation exon 21702297 21702564 . + . Parent=GSCOCT00031932001 | |
| 47342 chr10 manual_curation exon 21702677 21703064 . + . Parent=GSCOCT00031932001 | |
| 47343 chr10 manual_curation exon 21703170 21703388 . + . Parent=GSCOCT00031932001 | |
| 47344 chr10 manual_curation exon 21703570 21703708 . + . Parent=GSCOCT00031932001 | |
| 47345 chr10 manual_curation exon 21703799 21703855 . + . Parent=GSCOCT00031932001 | |
| 47346 chr10 manual_curation exon 21703958 21704053 . + . Parent=GSCOCT00031932001 | |
| 47347 chr10 manual_curation exon 21704587 21705459 . + . Parent=GSCOCT00031932001 | |
| 47348 chr10 manual_curation CDS 21701970 21702200 . + 0 Parent=GSCOCT00031932001 | |
| 47349 chr10 manual_curation CDS 21702297 21702564 . + 0 Parent=GSCOCT00031932001 | |
| 47350 chr10 manual_curation CDS 21702677 21703064 . + 1 Parent=GSCOCT00031932001 | |
| 47351 chr10 manual_curation CDS 21703170 21703388 . + 2 Parent=GSCOCT00031932001 | |
| 47352 chr10 manual_curation CDS 21703570 21703708 . + 2 Parent=GSCOCT00031932001 | |
| 47353 chr10 manual_curation CDS 21703799 21703855 . + 0 Parent=GSCOCT00031932001 | |
| 47354 chr10 manual_curation CDS 21703958 21704053 . + 0 Parent=GSCOCT00031932001 | |
| 47355 chr10 manual_curation CDS 21704587 21704886 . + 0 Parent=GSCOCT00031932001 | |
| 47356 chr10 manual_curation gene 21708529 21712087 . - . ID=GSCOCG00031933001;Name=Cc10_g12320 | |
| 47357 chr10 manual_curation mRNA 21708529 21712087 . - . ID=GSCOCT00031933001;Parent=GSCOCG00031933001;Name=Cc10_g12320 | |
| 47358 chr10 manual_curation polypeptide 21709061 21711968 . - . ID=GSCOCP00031933001;Dbxref=GENE3D:G3DSA:1.10.600.10,InterPro:IPR001906,InterPro:IPR005630,InterPro:IPR008930,InterPro:IPR008949,PFAM:PF01397,PFAM:PF03936,SUPERFAMILY:SSF48239,SUPERFAMILY:SSF48576,SwissProt:Q5SBP1,SwissProt:Q5SBP2,SwissProt:Q93X23,TAIR:AT3G25810.1,TAIR:AT3G25820.1,TAIR:AT3G25830.1,TrEMBL:F6I5S6,TrEMBL:Q6PWU1,TrEMBL:Q6PWU2;Derives_from=GSCOCT00031933001;Name=Cc10_g12320;Ontology_term=CC_evidence_code:ISS,GO:0000287,GO:0008152,GO:0016829,CC_EC_number:4.2.3.11,PRODUCT:Myrcene synthase%2C chloroplastic,CC_functional_completeness:complete,CC_gene:MYS,CC_gene:FES;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031933001~ Myrcene synthase%2C chloroplastic~ MYS~ complete;original_location=complement(join(1442101..1442328%2C1441737..1442004%2C1441237..1441624%2C1440913..1441131%2C1440597..1440735%2C1440253..1440507%2C1439421..1439720));owner=coffea | |
| 47359 chr10 manual_curation exon 21708529 21709360 . - . Parent=GSCOCT00031933001 | |
| 47360 chr10 manual_curation exon 21709893 21710147 . - . Parent=GSCOCT00031933001 | |
| 47361 chr10 manual_curation exon 21710237 21710375 . - . Parent=GSCOCT00031933001 | |
| 47362 chr10 manual_curation exon 21710553 21710771 . - . Parent=GSCOCT00031933001 | |
| 47363 chr10 manual_curation exon 21710877 21711264 . - . Parent=GSCOCT00031933001 | |
| 47364 chr10 manual_curation exon 21711377 21711644 . - . Parent=GSCOCT00031933001 | |
| 47365 chr10 manual_curation exon 21711741 21712087 . - . Parent=GSCOCT00031933001 | |
| 47366 chr10 manual_curation CDS 21709061 21709360 . - 0 Parent=GSCOCT00031933001 | |
| 47367 chr10 manual_curation CDS 21709893 21710147 . - 0 Parent=GSCOCT00031933001 | |
| 47368 chr10 manual_curation CDS 21710237 21710375 . - 2 Parent=GSCOCT00031933001 | |
| 47369 chr10 manual_curation CDS 21710553 21710771 . - 2 Parent=GSCOCT00031933001 | |
| 47370 chr10 manual_curation CDS 21710877 21711264 . - 1 Parent=GSCOCT00031933001 | |
| 47371 chr10 manual_curation CDS 21711377 21711644 . - 0 Parent=GSCOCT00031933001 | |
| 47372 chr10 manual_curation CDS 21711741 21711968 . - 0 Parent=GSCOCT00031933001 | |
| 47373 chr10 manual_curation gene 21713210 21713976 . - . ID=GSCOCG00031934001;Name=Cc10_g12330 | |
| 47374 chr10 manual_curation mRNA 21713210 21713976 . - . ID=GSCOCT00031934001;Parent=GSCOCG00031934001;Name=Cc10_g12330 | |
| 47375 chr10 manual_curation polypeptide 21713210 21713857 . - . ID=GSCOCP00031934001;Dbxref=InterPro:IPR001906,InterPro:IPR008930,PFAM:PF01397,SUPERFAMILY:SSF48239,SwissProt:O81193,SwissProt:Q5SBP0,SwissProt:Q5SBP1,TAIR:AT2G24210.1,TAIR:AT3G25830.1,TAIR:AT4G16740.1,TrEMBL:E9N3V0,TrEMBL:G1JUH5,TrEMBL:Q5D1Y7;Derives_from=GSCOCT00031934001;Name=Cc10_g12330;Ontology_term=CC_evidence_code:ISS,GO:0008152,GO:0016829,CC_EC_number:4.2.3.11,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:MYS,CC_gene:TES;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031934001~ Hypothetical protein~ MYS~ missing_functional_completeness;original_location=complement(join(1443990..1444217%2C1443570..1443893));owner=coffea | |
| 47376 chr10 manual_curation exon 21713210 21713533 . - . Parent=GSCOCT00031934001 | |
| 47377 chr10 manual_curation exon 21713630 21713976 . - . Parent=GSCOCT00031934001 | |
| 47378 chr10 manual_curation CDS 21713210 21713533 . - 0 Parent=GSCOCT00031934001 | |
| 47379 chr10 manual_curation CDS 21713630 21713857 . - 0 Parent=GSCOCT00031934001 | |
| 47380 chr10 manual_curation gene 21715009 21717669 . + . ID=GSCOCG00031935001;Name=Cc10_g12340 | |
| 47381 chr10 manual_curation mRNA 21715009 21717669 . + . ID=GSCOCT00031935001;Parent=GSCOCG00031935001;Name=Cc10_g12340 | |
| 47382 chr10 manual_curation polypeptide 21715009 21717669 . + . ID=GSCOCP00031935001;Dbxref=InterPro:IPR000795,InterPro:IPR015760,PANTHER:PTHR23115:SF41,PFAM:PF00009,SwissProt:B2J955,SwissProt:P57997,SwissProt:Q9SHI1,TAIR:AT1G17220.1,TAIR:AT4G11160.1,TrEMBL:A5B2X2,TrEMBL:B9GHX7,TrEMBL:F6H4W1;Derives_from=GSCOCT00031935001;Name=Cc10_g12340;Ontology_term=CC_evidence_code:ISS,GO:0003924,GO:0005525,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:IF2CP,CC_gene:At1g17220,CC_gene:infB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031935001~ Hypothetical protein~ IF2CP~ missing_functional_completeness;original_location=join(1445369..1445557%2C1445722..1445820%2C1446796..1446899%2C1446945..1447014%2C1447080..1447122%2C1447372..1447404%2C1447563..1447669%2C1447844..1448029);owner=coffea | |
| 47383 chr10 manual_curation exon 21715009 21715197 . + . Parent=GSCOCT00031935001 | |
| 47384 chr10 manual_curation exon 21715362 21715460 . + . Parent=GSCOCT00031935001 | |
| 47385 chr10 manual_curation exon 21716436 21716539 . + . Parent=GSCOCT00031935001 | |
| 47386 chr10 manual_curation exon 21716585 21716654 . + . Parent=GSCOCT00031935001 | |
| 47387 chr10 manual_curation exon 21716720 21716762 . + . Parent=GSCOCT00031935001 | |
| 47388 chr10 manual_curation exon 21717012 21717044 . + . Parent=GSCOCT00031935001 | |
| 47389 chr10 manual_curation exon 21717203 21717309 . + . Parent=GSCOCT00031935001 | |
| 47390 chr10 manual_curation exon 21717484 21717669 . + . Parent=GSCOCT00031935001 | |
| 47391 chr10 manual_curation CDS 21715009 21715197 . + 0 Parent=GSCOCT00031935001 | |
| 47392 chr10 manual_curation CDS 21715362 21715460 . + 0 Parent=GSCOCT00031935001 | |
| 47393 chr10 manual_curation CDS 21716436 21716539 . + 0 Parent=GSCOCT00031935001 | |
| 47394 chr10 manual_curation CDS 21716585 21716654 . + 2 Parent=GSCOCT00031935001 | |
| 47395 chr10 manual_curation CDS 21716720 21716762 . + 0 Parent=GSCOCT00031935001 | |
| 47396 chr10 manual_curation CDS 21717012 21717044 . + 1 Parent=GSCOCT00031935001 | |
| 47397 chr10 manual_curation CDS 21717203 21717309 . + 1 Parent=GSCOCT00031935001 | |
| 47398 chr10 manual_curation CDS 21717484 21717669 . + 0 Parent=GSCOCT00031935001 | |
| 47399 chr10 manual_curation gene 21838163 21838977 . + . ID=GSCOCG00031940001;Name=Cc10_g12350 | |
| 47400 chr10 manual_curation mRNA 21838163 21838977 . + . ID=GSCOCT00031940001;Parent=GSCOCG00031940001;Name=Cc10_g12350 | |
| 47401 chr10 manual_curation polypeptide 21838163 21838977 . + . ID=GSCOCP00031940001;Dbxref=InterPro:IPR019557,PFAM:PF10536,SwissProt:Q9LNG5,TAIR:AT1G48120.1,TrEMBL:A5AWR0,TrEMBL:A5BJW1,TrEMBL:A5C0F5;Derives_from=GSCOCT00031940001;Name=Cc10_g12350;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Serine/threonine-protein phosphatase 7 long form homolog,CC_functional_completeness:fragment,CC_gene:At1g48120;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031940001~ Putative Serine/threonine-protein phosphatase 7 long form homolog~ At1g48120~ fragment;original_location=join(1568523..1568534%2C1568624..1568797%2C1568882..1569337);owner=coffea | |
| 47402 chr10 manual_curation exon 21838163 21838174 . + . Parent=GSCOCT00031940001 | |
| 47403 chr10 manual_curation exon 21838264 21838437 . + . Parent=GSCOCT00031940001 | |
| 47404 chr10 manual_curation exon 21838522 21838977 . + . Parent=GSCOCT00031940001 | |
| 47405 chr10 manual_curation CDS 21838163 21838174 . + 0 Parent=GSCOCT00031940001 | |
| 47406 chr10 manual_curation CDS 21838264 21838437 . + 0 Parent=GSCOCT00031940001 | |
| 47407 chr10 manual_curation CDS 21838522 21838977 . + 0 Parent=GSCOCT00031940001 | |
| 47408 chr10 manual_curation gene 21847515 21853384 . + . ID=GSCOCG00031941001;Name=Cc10_g12360 | |
| 47409 chr10 manual_curation mRNA 21847515 21853384 . + . ID=GSCOCT00031941001;Parent=GSCOCG00031941001;Name=Cc10_g12360 | |
| 47410 chr10 manual_curation polypeptide 21847591 21853142 . + . ID=GSCOCP00031941001;Dbxref=GENE3D:G3DSA:1.10.600.10,InterPro:IPR001906,InterPro:IPR005630,InterPro:IPR008930,InterPro:IPR008949,PFAM:PF01397,PFAM:PF03936,SUPERFAMILY:SSF48239,SUPERFAMILY:SSF48576,SwissProt:Q5SBP1,SwissProt:Q5SBP2,SwissProt:Q93X23,TAIR:AT3G25810.1,TAIR:AT3G25820.1,TAIR:AT3G25830.1,TrEMBL:F6I5S6,TrEMBL:Q6PWU1,TrEMBL:Q6PWU2;Derives_from=GSCOCT00031941001;Name=Cc10_g12360;Ontology_term=CC_evidence_code:ISS,GO:0000287,GO:0008152,GO:0016829,CC_EC_number:4.2.3.20,PRODUCT:Myrcene synthase%2C chloroplastic,CC_functional_completeness:complete,CC_gene:MYS,CC_gene:FES;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031941001~ Myrcene synthase%2C chloroplastic~ MYS~ complete;original_location=join(1577951..1578067%2C1578166..1578424%2C1581373..1581741%2C1581903..1582098%2C1582205..1582343%2C1582428..1582682%2C1583203..1583502);owner=coffea | |
| 47411 chr10 manual_curation exon 21847515 21847707 . + . Parent=GSCOCT00031941001 | |
| 47412 chr10 manual_curation exon 21847806 21848064 . + . Parent=GSCOCT00031941001 | |
| 47413 chr10 manual_curation exon 21851013 21851381 . + . Parent=GSCOCT00031941001 | |
| 47414 chr10 manual_curation exon 21851543 21851738 . + . Parent=GSCOCT00031941001 | |
| 47415 chr10 manual_curation exon 21851845 21851983 . + . Parent=GSCOCT00031941001 | |
| 47416 chr10 manual_curation exon 21852068 21852322 . + . Parent=GSCOCT00031941001 | |
| 47417 chr10 manual_curation exon 21852843 21853384 . + . Parent=GSCOCT00031941001 | |
| 47418 chr10 manual_curation CDS 21847591 21847707 . + 0 Parent=GSCOCT00031941001 | |
| 47419 chr10 manual_curation CDS 21847806 21848064 . + 0 Parent=GSCOCT00031941001 | |
| 47420 chr10 manual_curation CDS 21851013 21851381 . + 1 Parent=GSCOCT00031941001 | |
| 47421 chr10 manual_curation CDS 21851543 21851738 . + 1 Parent=GSCOCT00031941001 | |
| 47422 chr10 manual_curation CDS 21851845 21851983 . + 2 Parent=GSCOCT00031941001 | |
| 47423 chr10 manual_curation CDS 21852068 21852322 . + 0 Parent=GSCOCT00031941001 | |
| 47424 chr10 manual_curation CDS 21852843 21853142 . + 0 Parent=GSCOCT00031941001 | |
| 47425 chr10 manual_curation gene 21866653 21871989 . - . ID=GSCOCG00031942001;Name=Cc10_g12370 | |
| 47426 chr10 manual_curation mRNA 21866653 21871989 . - . ID=GSCOCT00031942001;Parent=GSCOCG00031942001;Name=Cc10_g12370 | |
| 47427 chr10 manual_curation polypeptide 21866653 21871989 . - . ID=GSCOCP00031942001;Dbxref=InterPro:IPR001046,PANTHER:PTHR11706,PFAM:PF01566,PRINTS:PR00447,SwissProt:Q0D7E4,SwissProt:Q6ZG85,SwissProt:Q8H4H5,TAIR:AT1G15960.1,TAIR:AT1G47240.1,TAIR:AT1G80830.1,TIGRFAMs:TIGR01197,TrEMBL:B9H7I1,TrEMBL:E0CR31,TrEMBL:Q84LR1;Derives_from=GSCOCT00031942001;Name=Cc10_g12370;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006810,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Metal transporter Nramp5,CC_functional_completeness:complete,CC_gene:NRAMP5,CC_gene:NRAMP1,CC_gene:NRAT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031942001~ Metal transporter Nramp5~ NRAMP5~ complete;original_location=complement(join(1602248..1602349%2C1602077..1602155%2C1601930..1601970%2C1601849..1601890%2C1601466..1601544%2C1601265..1601369%2C1601027..1601136%2C1600156..1600337%2C1599943..1600012%2C1598942..1599115%2C1598197..1598301%2C1597962..1598093%2C1597758..1597853%2C1597013..1597342));owner=coffea | |
| 47428 chr10 manual_curation exon 21866653 21866982 . - . Parent=GSCOCT00031942001 | |
| 47429 chr10 manual_curation exon 21867398 21867493 . - . Parent=GSCOCT00031942001 | |
| 47430 chr10 manual_curation exon 21867602 21867733 . - . Parent=GSCOCT00031942001 | |
| 47431 chr10 manual_curation exon 21867837 21867941 . - . Parent=GSCOCT00031942001 | |
| 47432 chr10 manual_curation exon 21868582 21868755 . - . Parent=GSCOCT00031942001 | |
| 47433 chr10 manual_curation exon 21869583 21869652 . - . Parent=GSCOCT00031942001 | |
| 47434 chr10 manual_curation exon 21869796 21869977 . - . Parent=GSCOCT00031942001 | |
| 47435 chr10 manual_curation exon 21870667 21870776 . - . Parent=GSCOCT00031942001 | |
| 47436 chr10 manual_curation exon 21870905 21871009 . - . Parent=GSCOCT00031942001 | |
| 47437 chr10 manual_curation exon 21871106 21871184 . - . Parent=GSCOCT00031942001 | |
| 47438 chr10 manual_curation exon 21871489 21871530 . - . Parent=GSCOCT00031942001 | |
| 47439 chr10 manual_curation exon 21871570 21871610 . - . Parent=GSCOCT00031942001 | |
| 47440 chr10 manual_curation exon 21871717 21871795 . - . Parent=GSCOCT00031942001 | |
| 47441 chr10 manual_curation exon 21871888 21871989 . - . Parent=GSCOCT00031942001 | |
| 47442 chr10 manual_curation CDS 21866653 21866982 . - 0 Parent=GSCOCT00031942001 | |
| 47443 chr10 manual_curation CDS 21867398 21867493 . - 0 Parent=GSCOCT00031942001 | |
| 47444 chr10 manual_curation CDS 21867602 21867733 . - 0 Parent=GSCOCT00031942001 | |
| 47445 chr10 manual_curation CDS 21867837 21867941 . - 0 Parent=GSCOCT00031942001 | |
| 47446 chr10 manual_curation CDS 21868582 21868755 . - 0 Parent=GSCOCT00031942001 | |
| 47447 chr10 manual_curation CDS 21869583 21869652 . - 2 Parent=GSCOCT00031942001 | |
| 47448 chr10 manual_curation CDS 21869796 21869977 . - 0 Parent=GSCOCT00031942001 | |
| 47449 chr10 manual_curation CDS 21870667 21870776 . - 1 Parent=GSCOCT00031942001 | |
| 47450 chr10 manual_curation CDS 21870905 21871009 . - 1 Parent=GSCOCT00031942001 | |
| 47451 chr10 manual_curation CDS 21871106 21871184 . - 0 Parent=GSCOCT00031942001 | |
| 47452 chr10 manual_curation CDS 21871489 21871530 . - 0 Parent=GSCOCT00031942001 | |
| 47453 chr10 manual_curation CDS 21871570 21871610 . - 1 Parent=GSCOCT00031942001 | |
| 47454 chr10 manual_curation CDS 21871717 21871795 . - 0 Parent=GSCOCT00031942001 | |
| 47455 chr10 manual_curation CDS 21871888 21871989 . - 0 Parent=GSCOCT00031942001 | |
| 47456 chr10 manual_curation gene 21876722 21882150 . - . ID=GSCOCG00031944001;Name=Cc10_g12380 | |
| 47457 chr10 manual_curation mRNA 21876722 21882150 . - . ID=GSCOCT00031944001;Parent=GSCOCG00031944001;Name=Cc10_g12380 | |
| 47458 chr10 manual_curation polypeptide 21876722 21882015 . - . ID=GSCOCP00031944001;Dbxref=InterPro:IPR001140,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR011527,InterPro:IPR017871,InterPro:IPR017940,PFAM:PF00005,PFAM:PF00664,PROFILE:PS50893,PROFILE:PS50929,PROSITE:PS00211,SMART:SM00382,SUPERFAMILY:SSF90123,SwissProt:Q7FB56,SwissProt:Q8VZZ4,SwissProt:Q9M1C7,TAIR:AT3G13090.1,TAIR:AT3G60160.1,TAIR:AT3G60970.1,TrEMBL:B9HLA5,TrEMBL:B9RMN4,TrEMBL:I1KRY8;Derives_from=GSCOCT00031944001;Name=Cc10_g12380;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0006810,GO:0016021,GO:0016887,GO:0017111,GO:0055085,CC_EC_number:3.6.3.44,CC_EC_number:3.6.3.44,PRODUCT:Putative ABC transporter C family member 9,CC_functional_completeness:complete,CC_gene:ABCC9,CC_gene:ABCC6,CC_gene:ABCC15;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031944001~ Putative ABC transporter C family member 9~ ABCC9~ complete;original_location=complement(join(1612012..1612375%2C1611211..1611914%2C1610545..1611045%2C1610288..1610374%2C1609599..1610201%2C1609332..1609496%2C1608899..1609193%2C1608111..1608631%2C1607962..1608025%2C1607548..1607787%2C1607082..1607179));owner=coffea | |
| 47459 chr10 manual_curation exon 21876722 21876819 . - . Parent=GSCOCT00031944001 | |
| 47460 chr10 manual_curation exon 21877188 21877427 . - . Parent=GSCOCT00031944001 | |
| 47461 chr10 manual_curation exon 21877602 21877665 . - . Parent=GSCOCT00031944001 | |
| 47462 chr10 manual_curation exon 21877751 21878271 . - . Parent=GSCOCT00031944001 | |
| 47463 chr10 manual_curation exon 21878539 21878833 . - . Parent=GSCOCT00031944001 | |
| 47464 chr10 manual_curation exon 21878972 21879136 . - . Parent=GSCOCT00031944001 | |
| 47465 chr10 manual_curation exon 21879239 21879841 . - . Parent=GSCOCT00031944001 | |
| 47466 chr10 manual_curation exon 21879928 21880014 . - . Parent=GSCOCT00031944001 | |
| 47467 chr10 manual_curation exon 21880185 21880685 . - . Parent=GSCOCT00031944001 | |
| 47468 chr10 manual_curation exon 21880851 21881554 . - . Parent=GSCOCT00031944001 | |
| 47469 chr10 manual_curation exon 21881652 21882150 . - . Parent=GSCOCT00031944001 | |
| 47470 chr10 manual_curation CDS 21876722 21876819 . - 1 Parent=GSCOCT00031944001 | |
| 47471 chr10 manual_curation CDS 21877188 21877427 . - 1 Parent=GSCOCT00031944001 | |
| 47472 chr10 manual_curation CDS 21877602 21877665 . - 0 Parent=GSCOCT00031944001 | |
| 47473 chr10 manual_curation CDS 21877751 21878271 . - 1 Parent=GSCOCT00031944001 | |
| 47474 chr10 manual_curation CDS 21878539 21878833 . - 0 Parent=GSCOCT00031944001 | |
| 47475 chr10 manual_curation CDS 21878972 21879136 . - 0 Parent=GSCOCT00031944001 | |
| 47476 chr10 manual_curation CDS 21879239 21879841 . - 0 Parent=GSCOCT00031944001 | |
| 47477 chr10 manual_curation CDS 21879928 21880014 . - 0 Parent=GSCOCT00031944001 | |
| 47478 chr10 manual_curation CDS 21880185 21880685 . - 0 Parent=GSCOCT00031944001 | |
| 47479 chr10 manual_curation CDS 21880851 21881554 . - 1 Parent=GSCOCT00031944001 | |
| 47480 chr10 manual_curation CDS 21881652 21882015 . - 0 Parent=GSCOCT00031944001 | |
| 47481 chr10 manual_curation gene 21903419 21906449 . - . ID=GSCOCG00031945001;Name=Cc10_g12390 | |
| 47482 chr10 manual_curation mRNA 21903419 21906449 . - . ID=GSCOCT00031945001;Parent=GSCOCG00031945001;Name=Cc10_g12390 | |
| 47483 chr10 manual_curation polypeptide 21903419 21906449 . - . ID=GSCOCP00031945001;Dbxref=InterPro:IPR001046,PANTHER:PTHR11706,PFAM:PF01566,PRINTS:PR00447,SwissProt:Q0D7E4,SwissProt:Q6ZG85,SwissProt:Q8H4H5,TAIR:AT1G15960.1,TAIR:AT1G80830.1,TAIR:AT5G67330.1,TrEMBL:B9H7I0,TrEMBL:E0CR31,TrEMBL:Q84LR1;Derives_from=GSCOCT00031945001;Name=Cc10_g12390;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006810,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Metal transporter Nramp5,CC_functional_completeness:fragment,CC_gene:NRAMP5,CC_gene:NRAMP1,CC_gene:NRAT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031945001~ Metal transporter Nramp5~ NRAMP5~ fragment;original_location=complement(join(1636670..1636809%2C1636484..1636553%2C1636127..1636300%2C1634951..1635055%2C1634714..1634845%2C1634487..1634582%2C1633779..1634108));owner=coffea | |
| 47484 chr10 manual_curation exon 21903419 21903748 . - . Parent=GSCOCT00031945001 | |
| 47485 chr10 manual_curation exon 21904127 21904222 . - . Parent=GSCOCT00031945001 | |
| 47486 chr10 manual_curation exon 21904354 21904485 . - . Parent=GSCOCT00031945001 | |
| 47487 chr10 manual_curation exon 21904591 21904695 . - . Parent=GSCOCT00031945001 | |
| 47488 chr10 manual_curation exon 21905767 21905940 . - . Parent=GSCOCT00031945001 | |
| 47489 chr10 manual_curation exon 21906124 21906193 . - . Parent=GSCOCT00031945001 | |
| 47490 chr10 manual_curation exon 21906310 21906449 . - . Parent=GSCOCT00031945001 | |
| 47491 chr10 manual_curation CDS 21903419 21903748 . - 0 Parent=GSCOCT00031945001 | |
| 47492 chr10 manual_curation CDS 21904127 21904222 . - 0 Parent=GSCOCT00031945001 | |
| 47493 chr10 manual_curation CDS 21904354 21904485 . - 0 Parent=GSCOCT00031945001 | |
| 47494 chr10 manual_curation CDS 21904591 21904695 . - 0 Parent=GSCOCT00031945001 | |
| 47495 chr10 manual_curation CDS 21905767 21905940 . - 0 Parent=GSCOCT00031945001 | |
| 47496 chr10 manual_curation CDS 21906124 21906193 . - 2 Parent=GSCOCT00031945001 | |
| 47497 chr10 manual_curation CDS 21906310 21906449 . - 0 Parent=GSCOCT00031945001 | |
| 47498 chr10 manual_curation gene 21908749 21910479 . - . ID=GSCOCG00031946001;Name=Cc10_g12400 | |
| 47499 chr10 manual_curation mRNA 21908749 21910479 . - . ID=GSCOCT00031946001;Parent=GSCOCG00031946001;Name=Cc10_g12400 | |
| 47500 chr10 manual_curation polypeptide 21908749 21910479 . - . ID=GSCOCP00031946001;Dbxref=InterPro:IPR001046,PANTHER:PTHR11706,PFAM:PF01566,SwissProt:Q0D7E4,SwissProt:Q8H4H5,SwissProt:Q9SAH8,TAIR:AT1G15960.1,TAIR:AT1G47240.1,TAIR:AT1G80830.1,TrEMBL:B9H7I1,TrEMBL:B9S2W4,TrEMBL:Q84LR1;Derives_from=GSCOCT00031946001;Name=Cc10_g12400;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006810,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Metal transporter Nramp5,CC_functional_completeness:fragment,CC_gene:NRAMP5,CC_gene:NRAMP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031946001~ Metal transporter Nramp5~ NRAMP5~ fragment;original_location=complement(join(1640711..1640839%2C1640545..1640623%2C1640361..1640413%2C1640185..1640263%2C1639984..1640091%2C1639783..1639827%2C1639109..1639263));owner=coffea | |
| 47501 chr10 manual_curation exon 21908749 21908903 . - . Parent=GSCOCT00031946001 | |
| 47502 chr10 manual_curation exon 21909423 21909467 . - . Parent=GSCOCT00031946001 | |
| 47503 chr10 manual_curation exon 21909624 21909731 . - . Parent=GSCOCT00031946001 | |
| 47504 chr10 manual_curation exon 21909825 21909903 . - . Parent=GSCOCT00031946001 | |
| 47505 chr10 manual_curation exon 21910001 21910053 . - . Parent=GSCOCT00031946001 | |
| 47506 chr10 manual_curation exon 21910185 21910263 . - . Parent=GSCOCT00031946001 | |
| 47507 chr10 manual_curation exon 21910351 21910479 . - . Parent=GSCOCT00031946001 | |
| 47508 chr10 manual_curation CDS 21908749 21908903 . - 1 Parent=GSCOCT00031946001 | |
| 47509 chr10 manual_curation CDS 21909423 21909467 . - 1 Parent=GSCOCT00031946001 | |
| 47510 chr10 manual_curation CDS 21909624 21909731 . - 1 Parent=GSCOCT00031946001 | |
| 47511 chr10 manual_curation CDS 21909825 21909903 . - 0 Parent=GSCOCT00031946001 | |
| 47512 chr10 manual_curation CDS 21910001 21910053 . - 1 Parent=GSCOCT00031946001 | |
| 47513 chr10 manual_curation CDS 21910185 21910263 . - 0 Parent=GSCOCT00031946001 | |
| 47514 chr10 manual_curation CDS 21910351 21910479 . - 0 Parent=GSCOCT00031946001 | |
| 47515 chr10 manual_curation gene 21940110 21948361 . - . ID=GSCOCG00031948001;Name=Cc10_g12410 | |
| 47516 chr10 manual_curation mRNA 21940110 21948361 . - . ID=GSCOCT00031948001;Parent=GSCOCG00031948001;Name=Cc10_g12410 | |
| 47517 chr10 manual_curation polypeptide 21940110 21948361 . - . ID=GSCOCP00031948001;Dbxref=InterPro:IPR001046,PANTHER:PTHR11706,PFAM:PF01566,PRINTS:PR00447,SwissProt:Q0D7E4,SwissProt:Q6ZG85,SwissProt:Q8H4H5,TAIR:AT1G15960.1,TAIR:AT1G80830.1,TAIR:AT5G67330.1,TIGRFAMs:TIGR01197,TrEMBL:B9H7I1,TrEMBL:E0CR31,TrEMBL:Q84LR1;Derives_from=GSCOCT00031948001;Name=Cc10_g12410;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006810,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Metal transporter Nramp5,CC_functional_completeness:complete,CC_gene:NRAMP5,CC_gene:NRAMP1,CC_gene:NRAT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031948001~ Metal transporter Nramp5~ NRAMP5~ complete;original_location=complement(join(1678593..1678721%2C1678426..1678504%2C1678242..1678294%2C1678088..1678166%2C1677883..1677987%2C1676937..1677046%2C1673223..1673404%2C1672996..1673065%2C1672663..1672836%2C1671913..1672017%2C1671675..1671806%2C1671452..1671547%2C1670470..1670799));owner=coffea | |
| 47518 chr10 manual_curation exon 21940110 21940439 . - . Parent=GSCOCT00031948001 | |
| 47519 chr10 manual_curation exon 21941092 21941187 . - . Parent=GSCOCT00031948001 | |
| 47520 chr10 manual_curation exon 21941315 21941446 . - . Parent=GSCOCT00031948001 | |
| 47521 chr10 manual_curation exon 21941553 21941657 . - . Parent=GSCOCT00031948001 | |
| 47522 chr10 manual_curation exon 21942303 21942476 . - . Parent=GSCOCT00031948001 | |
| 47523 chr10 manual_curation exon 21942636 21942705 . - . Parent=GSCOCT00031948001 | |
| 47524 chr10 manual_curation exon 21942863 21943044 . - . Parent=GSCOCT00031948001 | |
| 47525 chr10 manual_curation exon 21946577 21946686 . - . Parent=GSCOCT00031948001 | |
| 47526 chr10 manual_curation exon 21947523 21947627 . - . Parent=GSCOCT00031948001 | |
| 47527 chr10 manual_curation exon 21947728 21947806 . - . Parent=GSCOCT00031948001 | |
| 47528 chr10 manual_curation exon 21947882 21947934 . - . Parent=GSCOCT00031948001 | |
| 47529 chr10 manual_curation exon 21948066 21948144 . - . Parent=GSCOCT00031948001 | |
| 47530 chr10 manual_curation exon 21948233 21948361 . - . Parent=GSCOCT00031948001 | |
| 47531 chr10 manual_curation CDS 21940110 21940439 . - 0 Parent=GSCOCT00031948001 | |
| 47532 chr10 manual_curation CDS 21941092 21941187 . - 0 Parent=GSCOCT00031948001 | |
| 47533 chr10 manual_curation CDS 21941315 21941446 . - 0 Parent=GSCOCT00031948001 | |
| 47534 chr10 manual_curation CDS 21941553 21941657 . - 0 Parent=GSCOCT00031948001 | |
| 47535 chr10 manual_curation CDS 21942303 21942476 . - 0 Parent=GSCOCT00031948001 | |
| 47536 chr10 manual_curation CDS 21942636 21942705 . - 2 Parent=GSCOCT00031948001 | |
| 47537 chr10 manual_curation CDS 21942863 21943044 . - 0 Parent=GSCOCT00031948001 | |
| 47538 chr10 manual_curation CDS 21946577 21946686 . - 1 Parent=GSCOCT00031948001 | |
| 47539 chr10 manual_curation CDS 21947523 21947627 . - 1 Parent=GSCOCT00031948001 | |
| 47540 chr10 manual_curation CDS 21947728 21947806 . - 0 Parent=GSCOCT00031948001 | |
| 47541 chr10 manual_curation CDS 21947882 21947934 . - 1 Parent=GSCOCT00031948001 | |
| 47542 chr10 manual_curation CDS 21948066 21948144 . - 0 Parent=GSCOCT00031948001 | |
| 47543 chr10 manual_curation CDS 21948233 21948361 . - 0 Parent=GSCOCT00031948001 | |
| 47544 chr10 manual_curation gene 21970821 21971768 . - . ID=GSCOCG00031951001;Name=Cc10_g12420 | |
| 47545 chr10 manual_curation mRNA 21970821 21971768 . - . ID=GSCOCT00031951001;Parent=GSCOCG00031951001;Name=Cc10_g12420 | |
| 47546 chr10 manual_curation polypeptide 21970821 21971768 . - . ID=GSCOCP00031951001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q1PFC5,SwissProt:Q9FIX3,SwissProt:Q9LPX2,TAIR:AT1G12775.1,TAIR:AT1G77405.1,TAIR:AT5G39710.1,TIGRFAMs:TIGR00756,TrEMBL:B9S2W3,TrEMBL:D7KUI9,TrEMBL:F6GSP5;Derives_from=GSCOCT00031951001;Name=Cc10_g12420;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At1g77405,CC_functional_completeness:fragment,CC_gene:At1g77405,CC_gene:At1g12775,CC_gene:EMB2745;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031951001~ Pentatricopeptide repeat-containing protein At1g77405~ At1g77405~ fragment;original_location=complement(1701181..1702128);owner=coffea | |
| 47547 chr10 manual_curation exon 21970821 21971768 . - . Parent=GSCOCT00031951001 | |
| 47548 chr10 manual_curation CDS 21970821 21971768 . - 0 Parent=GSCOCT00031951001 | |
| 47549 chr10 manual_curation gene 21983507 21984142 . - . ID=GSCOCG00031954001;Name=Cc10_g12430 | |
| 47550 chr10 manual_curation mRNA 21983507 21984142 . - . ID=GSCOCT00031954001;Parent=GSCOCG00031954001;Name=Cc10_g12430 | |
| 47551 chr10 manual_curation polypeptide 21983507 21984142 . - . ID=GSCOCP00031954001;Dbxref=InterPro:IPR007789,PFAM:PF05097,TAIR:AT1G77400.1,TrEMBL:B9H7I2,TrEMBL:B9S2W2,TrEMBL:I1JZ31;Derives_from=GSCOCT00031954001;Name=Cc10_g12430;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative CONTAINS InterPro DOMAIN/s,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031954001~ Putative CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789)%3B BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G21695.1)%3B Has 328 Blast hits to 314 proteins in 61 species: Archae - 0%3B Bacteria - 12%3B Metazoa - 130%3B Fungi - 28%3B Plants - 92%3B Viruses - 10%3B Other Eukaryotes - 56 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(1713867..1714502);owner=coffea | |
| 47552 chr10 manual_curation exon 21983507 21984142 . - . Parent=GSCOCT00031954001 | |
| 47553 chr10 manual_curation CDS 21983507 21984142 . - 0 Parent=GSCOCT00031954001 | |
| 47554 chr10 manual_curation gene 21986814 21990928 . - . ID=GSCOCG00031956001;Name=Cc10_g12440 | |
| 47555 chr10 manual_curation mRNA 21986814 21990928 . - . ID=GSCOCT00031956001;Parent=GSCOCG00031956001;Name=Cc10_g12440 | |
| 47556 chr10 manual_curation polypeptide 21986814 21990928 . - . ID=GSCOCP00031956001;Dbxref=InterPro:IPR008921,InterPro:IPR013748,PFAM:PF08542,SUPERFAMILY:SSF48019,SwissProt:P35249,SwissProt:Q54MD4,SwissProt:Q99J62,TAIR:AT1G21690.3,TAIR:AT1G63160.1,TAIR:AT1G77470.1,TrEMBL:A5BRZ3,TrEMBL:B9H7I3,TrEMBL:B9S2W1;Derives_from=GSCOCT00031956001;Name=Cc10_g12440;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003689,GO:0005524,GO:0005663,GO:0006260,CC_EC_number:missing_EC_number,PRODUCT:Replication factor C subunit 4,CC_functional_completeness:fragment,CC_gene:Rfc4,CC_gene:RFC4,CC_gene:rfc4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031956001~ Replication factor C subunit 4~ Rfc4~ fragment;original_location=complement(join(1721233..1721288%2C1720680..1720800%2C1720502..1720564%2C1719722..1719781%2C1717932..1718057%2C1717770..1717853%2C1717174..1717278));owner=coffea | |
| 47557 chr10 manual_curation exon 21986814 21986918 . - . Parent=GSCOCT00031956001 | |
| 47558 chr10 manual_curation exon 21987410 21987493 . - . Parent=GSCOCT00031956001 | |
| 47559 chr10 manual_curation exon 21987572 21987697 . - . Parent=GSCOCT00031956001 | |
| 47560 chr10 manual_curation exon 21989362 21989421 . - . Parent=GSCOCT00031956001 | |
| 47561 chr10 manual_curation exon 21990142 21990204 . - . Parent=GSCOCT00031956001 | |
| 47562 chr10 manual_curation exon 21990320 21990440 . - . Parent=GSCOCT00031956001 | |
| 47563 chr10 manual_curation exon 21990873 21990928 . - . Parent=GSCOCT00031956001 | |
| 47564 chr10 manual_curation CDS 21986814 21986918 . - 0 Parent=GSCOCT00031956001 | |
| 47565 chr10 manual_curation CDS 21987410 21987493 . - 0 Parent=GSCOCT00031956001 | |
| 47566 chr10 manual_curation CDS 21987572 21987697 . - 0 Parent=GSCOCT00031956001 | |
| 47567 chr10 manual_curation CDS 21989362 21989421 . - 0 Parent=GSCOCT00031956001 | |
| 47568 chr10 manual_curation CDS 21990142 21990204 . - 0 Parent=GSCOCT00031956001 | |
| 47569 chr10 manual_curation CDS 21990320 21990440 . - 2 Parent=GSCOCT00031956001 | |
| 47570 chr10 manual_curation CDS 21990873 21990928 . - 0 Parent=GSCOCT00031956001 | |
| 47571 chr10 manual_curation gene 21990986 21993735 . - . ID=GSCOCG00031957001;Name=Cc10_g12450 | |
| 47572 chr10 manual_curation mRNA 21990986 21993735 . - . ID=GSCOCT00031957001;Parent=GSCOCG00031957001;Name=Cc10_g12450 | |
| 47573 chr10 manual_curation polypeptide 21990986 21993664 . - . ID=GSCOCP00031957001;Dbxref=InterPro:IPR003593,InterPro:IPR003959,PFAM:PF00004,SMART:SM00382,SwissProt:P35249,SwissProt:P40348,SwissProt:Q99J62,TAIR:AT1G63160.1,TAIR:AT1G77470.1,TrEMBL:I1JZ26,TrEMBL:I1JZ29;Derives_from=GSCOCT00031957001;Name=Cc10_g12450;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0017111,CC_EC_number:missing_EC_number,PRODUCT:Replication factor C subunit 4,CC_functional_completeness:fragment,CC_gene:Rfc4,CC_gene:RFC4,CC_gene:RFC2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031957001~ Replication factor C subunit 4~ Rfc4~ fragment;original_location=complement(join(1723981..1724024%2C1723791..1723869%2C1723575..1723654%2C1721583..1721702%2C1721346..1721448));owner=coffea | |
| 47574 chr10 manual_curation exon 21990986 21991088 . - . Parent=GSCOCT00031957001 | |
| 47575 chr10 manual_curation exon 21991223 21991342 . - . Parent=GSCOCT00031957001 | |
| 47576 chr10 manual_curation exon 21993215 21993294 . - . Parent=GSCOCT00031957001 | |
| 47577 chr10 manual_curation exon 21993431 21993509 . - . Parent=GSCOCT00031957001 | |
| 47578 chr10 manual_curation exon 21993621 21993735 . - . Parent=GSCOCT00031957001 | |
| 47579 chr10 manual_curation CDS 21990986 21991088 . - 2 Parent=GSCOCT00031957001 | |
| 47580 chr10 manual_curation CDS 21991223 21991342 . - 2 Parent=GSCOCT00031957001 | |
| 47581 chr10 manual_curation CDS 21993215 21993294 . - 0 Parent=GSCOCT00031957001 | |
| 47582 chr10 manual_curation CDS 21993431 21993509 . - 2 Parent=GSCOCT00031957001 | |
| 47583 chr10 manual_curation CDS 21993621 21993664 . - 0 Parent=GSCOCT00031957001 | |
| 47584 chr10 manual_curation gene 21994189 21996402 . + . ID=GSCOCG00031958001;Name=Cc10_g12460 | |
| 47585 chr10 manual_curation mRNA 21994189 21996402 . + . ID=GSCOCT00031958001;Parent=GSCOCG00031958001;Name=Cc10_g12460 | |
| 47586 chr10 manual_curation polypeptide 21994189 21996402 . + . ID=GSCOCP00031958001;Dbxref=TAIR:AT1G21690.3,TrEMBL:D7KKT1,TrEMBL:F4HY45,TrEMBL:I1JZ26;Derives_from=GSCOCT00031958001;Name=Cc10_g12460;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:ATPase family associated with various cellular activities (AAA),CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031958001~ ATPase family associated with various cellular activities (AAA)~ unknown_gene~ fragment;original_location=join(1724549..1724592%2C1724704..1724782%2C1726742..1726762);owner=coffea | |
| 47587 chr10 manual_curation exon 21994189 21994232 . + . Parent=GSCOCT00031958001 | |
| 47588 chr10 manual_curation exon 21994344 21994422 . + . Parent=GSCOCT00031958001 | |
| 47589 chr10 manual_curation exon 21996382 21996402 . + . Parent=GSCOCT00031958001 | |
| 47590 chr10 manual_curation CDS 21994189 21994232 . + 0 Parent=GSCOCT00031958001 | |
| 47591 chr10 manual_curation CDS 21994344 21994422 . + 2 Parent=GSCOCT00031958001 | |
| 47592 chr10 manual_curation CDS 21996382 21996402 . + 0 Parent=GSCOCT00031958001 | |
| 47593 chr10 manual_curation gene 21998587 21999333 . + . ID=GSCOCG00031959001;Name=Cc10_g12470 | |
| 47594 chr10 manual_curation mRNA 21998587 21999333 . + . ID=GSCOCT00031959001;Parent=GSCOCG00031959001;Name=Cc10_g12470 | |
| 47595 chr10 manual_curation polypeptide 21998587 21999333 . + . ID=GSCOCP00031959001;Dbxref=InterPro:IPR003892,PROFILE:PS51140,TAIR:AT1G80040.3,TAIR:AT5G02510.1,TAIR:AT5G32440.3,TrEMBL:A9PBC1,TrEMBL:B9IMV5,TrEMBL:D7TC54;Derives_from=GSCOCT00031959001;Name=Cc10_g12470;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Ubiquitin system component Cue protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031959001~ Putative Ubiquitin system component Cue protein~ unknown_gene~ complete;original_location=1728947..1729693;owner=coffea | |
| 47596 chr10 manual_curation exon 21998587 21999333 . + . Parent=GSCOCT00031959001 | |
| 47597 chr10 manual_curation CDS 21998587 21999333 . + 0 Parent=GSCOCT00031959001 | |
| 47598 chr10 manual_curation gene 22002344 22006511 . + . ID=GSCOCG00031960001;Name=Cc10_g12480 | |
| 47599 chr10 manual_curation mRNA 22002344 22006511 . + . ID=GSCOCT00031960001;Parent=GSCOCG00031960001;Name=Cc10_g12480 | |
| 47600 chr10 manual_curation polypeptide 22002574 22006374 . + . ID=GSCOCP00031960001;Dbxref=GENE3D:G3DSA:1.10.472.10,InterPro:IPR004367,InterPro:IPR006670,InterPro:IPR006671,InterPro:IPR011028,InterPro:IPR013763,InterPro:IPR014400,InterPro:IPR015453,PANTHER:PTHR10177:SF23,PFAM:PF00134,PFAM:PF02984,PIR:PIRSF001771,PROSITE:PS00292,SMART:SM00385,SUPERFAMILY:SSF47954,SwissProt:Q0INT0,SwissProt:Q7F830,SwissProt:Q9C6Y3,TAIR:AT1G44110.1,TAIR:AT1G77390.1,TAIR:AT1G80370.1,TrEMBL:Q40490,TrEMBL:Q40514,TrEMBL:Q4JF77;Derives_from=GSCOCT00031960001;Name=Cc10_g12480;Ontology_term=CC_evidence_code:ISS,GO:0005634,CC_EC_number:missing_EC_number,PRODUCT:Cyclin-A1-1,CC_functional_completeness:complete,CC_gene:CYCA1-1,CC_gene:CYCA1-3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031960001~ Cyclin-A1-1~ CYCA1-1~ complete;original_location=join(1732934..1733164%2C1733824..1734193%2C1734279..1734415%2C1734767..1734859%2C1735056..1735189%2C1735369..1735444%2C1735522..1735598%2C1735682..1735721%2C1736076..1736225%2C1736340..1736474%2C1736663..1736734);owner=coffea | |
| 47601 chr10 manual_curation exon 22002344 22002804 . + . Parent=GSCOCT00031960001 | |
| 47602 chr10 manual_curation exon 22003464 22003833 . + . Parent=GSCOCT00031960001 | |
| 47603 chr10 manual_curation exon 22003919 22004055 . + . Parent=GSCOCT00031960001 | |
| 47604 chr10 manual_curation exon 22004407 22004499 . + . Parent=GSCOCT00031960001 | |
| 47605 chr10 manual_curation exon 22004696 22004829 . + . Parent=GSCOCT00031960001 | |
| 47606 chr10 manual_curation exon 22005009 22005084 . + . Parent=GSCOCT00031960001 | |
| 47607 chr10 manual_curation exon 22005162 22005238 . + . Parent=GSCOCT00031960001 | |
| 47608 chr10 manual_curation exon 22005322 22005361 . + . Parent=GSCOCT00031960001 | |
| 47609 chr10 manual_curation exon 22005716 22005865 . + . Parent=GSCOCT00031960001 | |
| 47610 chr10 manual_curation exon 22005980 22006114 . + . Parent=GSCOCT00031960001 | |
| 47611 chr10 manual_curation exon 22006303 22006511 . + . Parent=GSCOCT00031960001 | |
| 47612 chr10 manual_curation CDS 22002574 22002804 . + 0 Parent=GSCOCT00031960001 | |
| 47613 chr10 manual_curation CDS 22003464 22003833 . + 0 Parent=GSCOCT00031960001 | |
| 47614 chr10 manual_curation CDS 22003919 22004055 . + 1 Parent=GSCOCT00031960001 | |
| 47615 chr10 manual_curation CDS 22004407 22004499 . + 0 Parent=GSCOCT00031960001 | |
| 47616 chr10 manual_curation CDS 22004696 22004829 . + 0 Parent=GSCOCT00031960001 | |
| 47617 chr10 manual_curation CDS 22005009 22005084 . + 2 Parent=GSCOCT00031960001 | |
| 47618 chr10 manual_curation CDS 22005162 22005238 . + 0 Parent=GSCOCT00031960001 | |
| 47619 chr10 manual_curation CDS 22005322 22005361 . + 2 Parent=GSCOCT00031960001 | |
| 47620 chr10 manual_curation CDS 22005716 22005865 . + 0 Parent=GSCOCT00031960001 | |
| 47621 chr10 manual_curation CDS 22005980 22006114 . + 0 Parent=GSCOCT00031960001 | |
| 47622 chr10 manual_curation CDS 22006303 22006374 . + 0 Parent=GSCOCT00031960001 | |
| 47623 chr10 manual_curation gene 22006901 22009048 . - . ID=GSCOCG00031961001;Name=Cc10_g12490 | |
| 47624 chr10 manual_curation mRNA 22006901 22009048 . - . ID=GSCOCT00031961001;Parent=GSCOCG00031961001;Name=Cc10_g12490 | |
| 47625 chr10 manual_curation polypeptide 22006901 22009048 . - . ID=GSCOCP00031961001;Dbxref=GENE3D:G3DSA:2.120.10.30,InterPro:IPR011042,InterPro:IPR011659,PFAM:PF07676,SwissProt:Q3A097,SwissProt:Q3B584,SwissProt:Q8KEQ0,TAIR:AT1G21670.1,TAIR:AT1G21680.1,TAIR:AT4G01870.1,TrEMBL:A5AL89,TrEMBL:B9S2V7,TrEMBL:F6H0J2;Derives_from=GSCOCT00031961001;Name=Cc10_g12490;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein TolB,CC_functional_completeness:modules,CC_gene:tolB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031961001~ Putative Protein TolB~ tolB~ modules;original_location=complement(1737261..1739408);owner=coffea | |
| 47626 chr10 manual_curation exon 22006901 22009048 . - . Parent=GSCOCT00031961001 | |
| 47627 chr10 manual_curation CDS 22006901 22009048 . - 0 Parent=GSCOCT00031961001 | |
| 47628 chr10 manual_curation gene 22042469 22044664 . - . ID=GSCOCG00031965001;Name=Cc10_g12500 | |
| 47629 chr10 manual_curation mRNA 22042469 22044664 . - . ID=GSCOCT00031965001;Parent=GSCOCG00031965001;Name=Cc10_g12500 | |
| 47630 chr10 manual_curation polypeptide 22042469 22044664 . - . ID=GSCOCP00031965001;Dbxref=GENE3D:G3DSA:2.120.10.30,InterPro:IPR011042,InterPro:IPR011659,PFAM:PF07676,SwissProt:Q3A097,SwissProt:Q3B584,SwissProt:Q8KEQ0,TAIR:AT1G21670.1,TAIR:AT1G21680.1,TAIR:AT4G01870.1,TrEMBL:A5AL89,TrEMBL:B9S2V7,TrEMBL:F6H0J2;Derives_from=GSCOCT00031965001;Name=Cc10_g12500;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein TolB,CC_functional_completeness:modules,CC_gene:tolB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031965001~ Putative Protein TolB~ tolB~ modules;original_location=complement(1772829..1775024);owner=coffea | |
| 47631 chr10 manual_curation exon 22042469 22044664 . - . Parent=GSCOCT00031965001 | |
| 47632 chr10 manual_curation CDS 22042469 22044664 . - 0 Parent=GSCOCT00031965001 | |
| 47633 chr10 manual_curation gene 22053180 22053621 . - . ID=GSCOCG00031966001;Name=Cc10_g12510 | |
| 47634 chr10 manual_curation mRNA 22053180 22053621 . - . ID=GSCOCT00031966001;Parent=GSCOCG00031966001;Name=Cc10_g12510 | |
| 47635 chr10 manual_curation polypeptide 22053180 22053621 . - . ID=GSCOCP00031966001;Dbxref=TAIR:AT1G56230.1,TrEMBL:B9I7B2,TrEMBL:G7I8S2,TrEMBL:I1LB83;Derives_from=GSCOCT00031966001;Name=Cc10_g12510;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF1399),CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031966001~ Protein of unknown function (DUF1399)~ unknown_gene~ fragment;original_location=complement(join(1783858..1783981%2C1783540..1783742));owner=coffea | |
| 47636 chr10 manual_curation exon 22053180 22053382 . - . Parent=GSCOCT00031966001 | |
| 47637 chr10 manual_curation exon 22053498 22053621 . - . Parent=GSCOCT00031966001 | |
| 47638 chr10 manual_curation CDS 22053180 22053382 . - 1 Parent=GSCOCT00031966001 | |
| 47639 chr10 manual_curation CDS 22053498 22053621 . - 0 Parent=GSCOCT00031966001 | |
| 47640 chr10 manual_curation gene 22078962 22082570 . + . ID=GSCOCG00031967001;Name=Cc10_g12520 | |
| 47641 chr10 manual_curation mRNA 22078962 22082570 . + . ID=GSCOCT00031967001;Parent=GSCOCG00031967001;Name=Cc10_g12520 | |
| 47642 chr10 manual_curation polypeptide 22080117 22082133 . + . ID=GSCOCP00031967001;Dbxref=InterPro:IPR013057,PFAM:PF01490,SwissProt:Q38967,SwissProt:Q39134,SwissProt:Q9FN04,TAIR:AT1G77380.1,TAIR:AT5G09220.1,TAIR:AT5G63850.1,TrEMBL:A5B880,TrEMBL:F6H4D7,TrEMBL:Q8GZV3;Derives_from=GSCOCT00031967001;Name=Cc10_g12520;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Amino acid permease 3,CC_functional_completeness:complete,CC_gene:AAP3,CC_gene:AAP2,CC_gene:AAP4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031967001~ Amino acid permease 3~ AAP3~ complete;original_location=join(1810477..1810603%2C1810707..1810940%2C1811064..1811157%2C1811245..1811459%2C1811586..1811725%2C1811840..1812415%2C1812473..1812493);owner=coffea | |
| 47643 chr10 manual_curation exon 22078962 22080243 . + . Parent=GSCOCT00031967001 | |
| 47644 chr10 manual_curation exon 22080347 22080580 . + . Parent=GSCOCT00031967001 | |
| 47645 chr10 manual_curation exon 22080704 22080797 . + . Parent=GSCOCT00031967001 | |
| 47646 chr10 manual_curation exon 22080885 22081099 . + . Parent=GSCOCT00031967001 | |
| 47647 chr10 manual_curation exon 22081226 22081365 . + . Parent=GSCOCT00031967001 | |
| 47648 chr10 manual_curation exon 22081480 22082055 . + . Parent=GSCOCT00031967001 | |
| 47649 chr10 manual_curation exon 22082113 22082570 . + . Parent=GSCOCT00031967001 | |
| 47650 chr10 manual_curation CDS 22080117 22080243 . + 0 Parent=GSCOCT00031967001 | |
| 47651 chr10 manual_curation CDS 22080347 22080580 . + 1 Parent=GSCOCT00031967001 | |
| 47652 chr10 manual_curation CDS 22080704 22080797 . + 1 Parent=GSCOCT00031967001 | |
| 47653 chr10 manual_curation CDS 22080885 22081099 . + 2 Parent=GSCOCT00031967001 | |
| 47654 chr10 manual_curation CDS 22081226 22081365 . + 1 Parent=GSCOCT00031967001 | |
| 47655 chr10 manual_curation CDS 22081480 22082055 . + 0 Parent=GSCOCT00031967001 | |
| 47656 chr10 manual_curation CDS 22082113 22082133 . + 0 Parent=GSCOCT00031967001 | |
| 47657 chr10 manual_curation gene 22099879 22102349 . - . ID=GSCOCG00031968001;Name=Cc10_g12530 | |
| 47658 chr10 manual_curation mRNA 22099879 22102349 . - . ID=GSCOCT00031968001;Parent=GSCOCG00031968001;Name=Cc10_g12530 | |
| 47659 chr10 manual_curation polypeptide 22099879 22102349 . - . ID=GSCOCP00031968001;Dbxref=GENE3D:G3DSA:1.10.287.110,InterPro:IPR001623,SwissProt:Q0WQ57,SwissProt:Q9SU08,TAIR:AT1G21660.1,TAIR:AT4G12770.1,TAIR:AT4G12780.1,TrEMBL:B9SF05,TrEMBL:C5YPK5,TrEMBL:D7MVK8;Derives_from=GSCOCT00031968001;Name=Cc10_g12530;Ontology_term=CC_evidence_code:ISS,GO:0031072,CC_EC_number:missing_EC_number,PRODUCT:Auxilin-related protein 1,CC_functional_completeness:fragment,CC_gene:At4g12780,CC_gene:At4g12770;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031968001~ Auxilin-related protein 1~ At4g12780~ fragment;original_location=complement(join(1832626..1832709%2C1832393..1832482%2C1831324..1831419%2C1831243..1831263%2C1830239..1830277));owner=coffea | |
| 47660 chr10 manual_curation exon 22099879 22099917 . - . Parent=GSCOCT00031968001 | |
| 47661 chr10 manual_curation exon 22100883 22100903 . - . Parent=GSCOCT00031968001 | |
| 47662 chr10 manual_curation exon 22100964 22101059 . - . Parent=GSCOCT00031968001 | |
| 47663 chr10 manual_curation exon 22102033 22102122 . - . Parent=GSCOCT00031968001 | |
| 47664 chr10 manual_curation exon 22102266 22102349 . - . Parent=GSCOCT00031968001 | |
| 47665 chr10 manual_curation CDS 22099879 22099917 . - 0 Parent=GSCOCT00031968001 | |
| 47666 chr10 manual_curation CDS 22100883 22100903 . - 0 Parent=GSCOCT00031968001 | |
| 47667 chr10 manual_curation CDS 22100964 22101059 . - 0 Parent=GSCOCT00031968001 | |
| 47668 chr10 manual_curation CDS 22102033 22102122 . - 0 Parent=GSCOCT00031968001 | |
| 47669 chr10 manual_curation CDS 22102266 22102349 . - 0 Parent=GSCOCT00031968001 | |
| 47670 chr10 manual_curation gene 22120596 22129575 . - . ID=GSCOCG00031969001;Name=Cc10_g12540 | |
| 47671 chr10 manual_curation mRNA 22120596 22129575 . - . ID=GSCOCT00031969001;Parent=GSCOCG00031969001;Name=Cc10_g12540 | |
| 47672 chr10 manual_curation polypeptide 22121249 22129292 . - . ID=GSCOCP00031969001;Dbxref=GENE3D:G3DSA:1.10.287.110,InterPro:IPR001623,SUPERFAMILY:SSF46565,SwissProt:O13773,SwissProt:Q0WQ57,SwissProt:Q9SU08,TAIR:AT1G21660.1,TAIR:AT4G12770.1,TAIR:AT4G12780.1,TrEMBL:B9GU07,TrEMBL:F6H4D8,TrEMBL:I1KAD6;Derives_from=GSCOCT00031969001;Name=Cc10_g12540;Ontology_term=CC_evidence_code:ISS,GO:0031072,CC_EC_number:missing_EC_number,PRODUCT:Putative Chaperone DnaJ-domain superfamily protein,CC_functional_completeness:complete,CC_gene:At4g12770,CC_gene:At4g12780,CC_gene:ucp7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031969001~ Putative Chaperone DnaJ-domain superfamily protein~ At4g12770~ complete;original_location=complement(join(1859111..1859652%2C1857780..1858260%2C1857579..1857696%2C1857368..1857453%2C1856136..1856201%2C1855719..1855808%2C1852346..1852522%2C1851609..1851638));owner=coffea | |
| 47673 chr10 manual_curation exon 22120596 22121278 . - . Parent=GSCOCT00031969001 | |
| 47674 chr10 manual_curation exon 22121986 22122162 . - . Parent=GSCOCT00031969001 | |
| 47675 chr10 manual_curation exon 22125359 22125448 . - . Parent=GSCOCT00031969001 | |
| 47676 chr10 manual_curation exon 22125776 22125841 . - . Parent=GSCOCT00031969001 | |
| 47677 chr10 manual_curation exon 22127008 22127093 . - . Parent=GSCOCT00031969001 | |
| 47678 chr10 manual_curation exon 22127219 22127336 . - . Parent=GSCOCT00031969001 | |
| 47679 chr10 manual_curation exon 22127420 22127900 . - . Parent=GSCOCT00031969001 | |
| 47680 chr10 manual_curation exon 22128751 22129575 . - . Parent=GSCOCT00031969001 | |
| 47681 chr10 manual_curation CDS 22121249 22121278 . - 0 Parent=GSCOCT00031969001 | |
| 47682 chr10 manual_curation CDS 22121986 22122162 . - 0 Parent=GSCOCT00031969001 | |
| 47683 chr10 manual_curation CDS 22125359 22125448 . - 0 Parent=GSCOCT00031969001 | |
| 47684 chr10 manual_curation CDS 22125776 22125841 . - 0 Parent=GSCOCT00031969001 | |
| 47685 chr10 manual_curation CDS 22127008 22127093 . - 1 Parent=GSCOCT00031969001 | |
| 47686 chr10 manual_curation CDS 22127219 22127336 . - 0 Parent=GSCOCT00031969001 | |
| 47687 chr10 manual_curation CDS 22127420 22127900 . - 2 Parent=GSCOCT00031969001 | |
| 47688 chr10 manual_curation CDS 22128751 22129292 . - 0 Parent=GSCOCT00031969001 | |
| 47689 chr10 manual_curation gene 22138314 22143259 . - . ID=GSCOCG00031971001;Name=Cc10_g12550 | |
| 47690 chr10 manual_curation mRNA 22138314 22143259 . - . ID=GSCOCT00031971001;Parent=GSCOCG00031971001;Name=Cc10_g12550 | |
| 47691 chr10 manual_curation polypeptide 22138603 22141193 . - . ID=GSCOCP00031971001;Dbxref=InterPro:IPR018614,PFAM:PF09775,SwissProt:Q1HQF8,SwissProt:Q5Q995,TAIR:AT1G77350.1,TrEMBL:D7KUI3,TrEMBL:D7T0X0,TrEMBL:Q9FVX3;Derives_from=GSCOCT00031971001;Name=Cc10_g12550;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein KRTCAP2 homolog,CC_functional_completeness:complete,CC_gene:AAEL007634;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031971001~ Putative Protein KRTCAP2 homolog~ AAEL007634~ complete;original_location=complement(join(1871398..1871553%2C1869905..1869956%2C1869623..1869689%2C1868963..1869053));owner=coffea | |
| 47692 chr10 manual_curation exon 22143166 22143259 . - . Parent=GSCOCT00031971001 | |
| 47693 chr10 manual_curation exon 22138314 22138693 . - . Parent=GSCOCT00031971001 | |
| 47694 chr10 manual_curation exon 22139263 22139329 . - . Parent=GSCOCT00031971001 | |
| 47695 chr10 manual_curation exon 22139545 22139596 . - . Parent=GSCOCT00031971001 | |
| 47696 chr10 manual_curation exon 22141038 22141203 . - . Parent=GSCOCT00031971001 | |
| 47697 chr10 manual_curation CDS 22138603 22138693 . - 2 Parent=GSCOCT00031971001 | |
| 47698 chr10 manual_curation CDS 22139263 22139329 . - 1 Parent=GSCOCT00031971001 | |
| 47699 chr10 manual_curation CDS 22139545 22139596 . - 0 Parent=GSCOCT00031971001 | |
| 47700 chr10 manual_curation CDS 22141038 22141193 . - 0 Parent=GSCOCT00031971001 | |
| 47701 chr10 manual_curation gene 22159128 22161722 . + . ID=GSCOCG00031972001;Name=Cc10_g12560 | |
| 47702 chr10 manual_curation mRNA 22159128 22161722 . + . ID=GSCOCT00031972001;Parent=GSCOCG00031972001;Name=Cc10_g12560 | |
| 47703 chr10 manual_curation polypeptide 22159191 22161410 . + . ID=GSCOCP00031972001;Dbxref=InterPro:IPR000109,InterPro:IPR016196,PFAM:PF00854,SUPERFAMILY:SSF103473,SwissProt:Q944G5,SwissProt:Q9LV10,SwissProt:Q9M9V7,TAIR:AT1G18880.1,TAIR:AT3G47960.1,TAIR:AT5G62680.1,TrEMBL:B9I314,TrEMBL:B9R934,TrEMBL:F6GTB2;Derives_from=GSCOCT00031972001;Name=Cc10_g12560;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006857,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Probable peptide/nitrate transporter At5g62680,CC_functional_completeness:complete,CC_gene:At5g62680,CC_gene:At1g18880,CC_gene:At3g47960;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031972001~ Probable peptide/nitrate transporter At5g62680~ At5g62680~ complete;original_location=join(1889551..1889641%2C1889736..1889953%2C1890158..1890714%2C1890843..1891770);owner=coffea | |
| 47704 chr10 manual_curation exon 22159128 22159281 . + . Parent=GSCOCT00031972001 | |
| 47705 chr10 manual_curation exon 22159376 22159593 . + . Parent=GSCOCT00031972001 | |
| 47706 chr10 manual_curation exon 22159798 22160354 . + . Parent=GSCOCT00031972001 | |
| 47707 chr10 manual_curation exon 22160483 22161722 . + . Parent=GSCOCT00031972001 | |
| 47708 chr10 manual_curation CDS 22159191 22159281 . + 0 Parent=GSCOCT00031972001 | |
| 47709 chr10 manual_curation CDS 22159376 22159593 . + 1 Parent=GSCOCT00031972001 | |
| 47710 chr10 manual_curation CDS 22159798 22160354 . + 0 Parent=GSCOCT00031972001 | |
| 47711 chr10 manual_curation CDS 22160483 22161410 . + 2 Parent=GSCOCT00031972001 | |
| 47712 chr10 manual_curation gene 22191541 22191987 . + . ID=GSCOCG00031975001;Name=Cc10_g12570 | |
| 47713 chr10 manual_curation mRNA 22191541 22191987 . + . ID=GSCOCT00031975001;Parent=GSCOCG00031975001;Name=Cc10_g12570 | |
| 47714 chr10 manual_curation polypeptide 22191541 22191987 . + . ID=GSCOCP00031975001;Derives_from=GSCOCT00031975001;Name=Cc10_g12570;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031975001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1921901..1922347;owner=coffea | |
| 47715 chr10 manual_curation exon 22191541 22191987 . + . Parent=GSCOCT00031975001 | |
| 47716 chr10 manual_curation CDS 22191541 22191987 . + 0 Parent=GSCOCT00031975001 | |
| 47717 chr10 manual_curation gene 22192417 22212075 . - . ID=GSCOCG00031976001;Name=Cc10_g12580 | |
| 47718 chr10 manual_curation mRNA 22192417 22212075 . - . ID=GSCOCT00031976001;Parent=GSCOCG00031976001;Name=Cc10_g12580 | |
| 47719 chr10 manual_curation polypeptide 22193453 22211289 . - . ID=GSCOCP00031976001;Dbxref=InterPro:IPR006895,InterPro:IPR006896,InterPro:IPR006900,InterPro:IPR007123,InterPro:IPR012990,PFAM:PF00626,PFAM:PF04810,PFAM:PF04811,PFAM:PF04815,PFAM:PF08033,SUPERFAMILY:SSF81811,SUPERFAMILY:SSF82919,SwissProt:P53992,SwissProt:Q9M081,SwissProt:Q9M291,TAIR:AT3G07100.1,TAIR:AT3G44340.1,TAIR:AT4G32640.1,TrEMBL:B9MZH5,TrEMBL:B9RET0,TrEMBL:E0CT66;Derives_from=GSCOCT00031976001;Name=Cc10_g12580;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0006886,GO:0006888,GO:0008270,GO:0030127,CC_EC_number:missing_EC_number,PRODUCT:Protein transport protein Sec24-like At4g32640,CC_functional_completeness:complete,CC_gene:At4g32640,CC_gene:CEF,CC_gene:SEC24C;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031976001~ Protein transport protein Sec24-like At4g32640~ At4g32640~ complete;original_location=complement(join(1940828..1941649%2C1936871..1937089%2C1936522..1936596%2C1936268..1936366%2C1935118..1935229%2C1934067..1934194%2C1933347..1933466%2C1932834..1932914%2C1932364..1932441%2C1932109..1932201%2C1931707..1931748%2C1931503..1931521%2C1931269..1931345%2C1929788..1929859%2C1929549..1929632%2C1929273..1929392%2C1929067..1929135%2C1927480..1927557%2C1927086..1927224%2C1926709..1926873%2C1926076..1926221%2C1925816..1925995%2C1924907..1924995%2C1924729..1924760%2C1923813..1923919));owner=coffea | |
| 47720 chr10 manual_curation exon 22211931 22212075 . - . Parent=GSCOCT00031976001 | |
| 47721 chr10 manual_curation exon 22192417 22193559 . - . Parent=GSCOCT00031976001 | |
| 47722 chr10 manual_curation exon 22194369 22194400 . - . Parent=GSCOCT00031976001 | |
| 47723 chr10 manual_curation exon 22194547 22194635 . - . Parent=GSCOCT00031976001 | |
| 47724 chr10 manual_curation exon 22195456 22195635 . - . Parent=GSCOCT00031976001 | |
| 47725 chr10 manual_curation exon 22195716 22195861 . - . Parent=GSCOCT00031976001 | |
| 47726 chr10 manual_curation exon 22196349 22196513 . - . Parent=GSCOCT00031976001 | |
| 47727 chr10 manual_curation exon 22196726 22196864 . - . Parent=GSCOCT00031976001 | |
| 47728 chr10 manual_curation exon 22197120 22197197 . - . Parent=GSCOCT00031976001 | |
| 47729 chr10 manual_curation exon 22198707 22198775 . - . Parent=GSCOCT00031976001 | |
| 47730 chr10 manual_curation exon 22198913 22199032 . - . Parent=GSCOCT00031976001 | |
| 47731 chr10 manual_curation exon 22199189 22199272 . - . Parent=GSCOCT00031976001 | |
| 47732 chr10 manual_curation exon 22199428 22199499 . - . Parent=GSCOCT00031976001 | |
| 47733 chr10 manual_curation exon 22200909 22200985 . - . Parent=GSCOCT00031976001 | |
| 47734 chr10 manual_curation exon 22201143 22201161 . - . Parent=GSCOCT00031976001 | |
| 47735 chr10 manual_curation exon 22201347 22201388 . - . Parent=GSCOCT00031976001 | |
| 47736 chr10 manual_curation exon 22201749 22201841 . - . Parent=GSCOCT00031976001 | |
| 47737 chr10 manual_curation exon 22202004 22202081 . - . Parent=GSCOCT00031976001 | |
| 47738 chr10 manual_curation exon 22202474 22202554 . - . Parent=GSCOCT00031976001 | |
| 47739 chr10 manual_curation exon 22202987 22203106 . - . Parent=GSCOCT00031976001 | |
| 47740 chr10 manual_curation exon 22203707 22203834 . - . Parent=GSCOCT00031976001 | |
| 47741 chr10 manual_curation exon 22204758 22204869 . - . Parent=GSCOCT00031976001 | |
| 47742 chr10 manual_curation exon 22205908 22206006 . - . Parent=GSCOCT00031976001 | |
| 47743 chr10 manual_curation exon 22206162 22206236 . - . Parent=GSCOCT00031976001 | |
| 47744 chr10 manual_curation exon 22206511 22206729 . - . Parent=GSCOCT00031976001 | |
| 47745 chr10 manual_curation exon 22210468 22211376 . - . Parent=GSCOCT00031976001 | |
| 47746 chr10 manual_curation CDS 22193453 22193559 . - 1 Parent=GSCOCT00031976001 | |
| 47747 chr10 manual_curation CDS 22194369 22194400 . - 2 Parent=GSCOCT00031976001 | |
| 47748 chr10 manual_curation CDS 22194547 22194635 . - 0 Parent=GSCOCT00031976001 | |
| 47749 chr10 manual_curation CDS 22195456 22195635 . - 0 Parent=GSCOCT00031976001 | |
| 47750 chr10 manual_curation CDS 22195716 22195861 . - 1 Parent=GSCOCT00031976001 | |
| 47751 chr10 manual_curation CDS 22196349 22196513 . - 1 Parent=GSCOCT00031976001 | |
| 47752 chr10 manual_curation CDS 22196726 22196864 . - 0 Parent=GSCOCT00031976001 | |
| 47753 chr10 manual_curation CDS 22197120 22197197 . - 0 Parent=GSCOCT00031976001 | |
| 47754 chr10 manual_curation CDS 22198707 22198775 . - 0 Parent=GSCOCT00031976001 | |
| 47755 chr10 manual_curation CDS 22198913 22199032 . - 0 Parent=GSCOCT00031976001 | |
| 47756 chr10 manual_curation CDS 22199189 22199272 . - 0 Parent=GSCOCT00031976001 | |
| 47757 chr10 manual_curation CDS 22199428 22199499 . - 0 Parent=GSCOCT00031976001 | |
| 47758 chr10 manual_curation CDS 22200909 22200985 . - 1 Parent=GSCOCT00031976001 | |
| 47759 chr10 manual_curation CDS 22201143 22201161 . - 0 Parent=GSCOCT00031976001 | |
| 47760 chr10 manual_curation CDS 22201347 22201388 . - 0 Parent=GSCOCT00031976001 | |
| 47761 chr10 manual_curation CDS 22201749 22201841 . - 0 Parent=GSCOCT00031976001 | |
| 47762 chr10 manual_curation CDS 22202004 22202081 . - 0 Parent=GSCOCT00031976001 | |
| 47763 chr10 manual_curation CDS 22202474 22202554 . - 0 Parent=GSCOCT00031976001 | |
| 47764 chr10 manual_curation CDS 22202987 22203106 . - 0 Parent=GSCOCT00031976001 | |
| 47765 chr10 manual_curation CDS 22203707 22203834 . - 1 Parent=GSCOCT00031976001 | |
| 47766 chr10 manual_curation CDS 22204758 22204869 . - 0 Parent=GSCOCT00031976001 | |
| 47767 chr10 manual_curation CDS 22205908 22206006 . - 0 Parent=GSCOCT00031976001 | |
| 47768 chr10 manual_curation CDS 22206162 22206236 . - 0 Parent=GSCOCT00031976001 | |
| 47769 chr10 manual_curation CDS 22206511 22206729 . - 0 Parent=GSCOCT00031976001 | |
| 47770 chr10 manual_curation CDS 22210468 22211289 . - 0 Parent=GSCOCT00031976001 | |
| 47771 chr10 manual_curation gene 22219282 22221126 . + . ID=GSCOCG00031977001;Name=Cc10_g12590 | |
| 47772 chr10 manual_curation mRNA 22219282 22221126 . + . ID=GSCOCT00031977001;Parent=GSCOCG00031977001;Name=Cc10_g12590 | |
| 47773 chr10 manual_curation polypeptide 22219494 22220225 . + . ID=GSCOCP00031977001;Dbxref=InterPro:IPR008796,PFAM:PF05479,SwissProt:O65107,SwissProt:P31093,SwissProt:P49107,TAIR:AT5G64040.2,TrEMBL:A9PIQ3,TrEMBL:B9HES1,TrEMBL:D5L5T1;Derives_from=GSCOCT00031977001;Name=Cc10_g12590;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0009522,GO:0015979,GO:0042651,CC_EC_number:missing_EC_number,PRODUCT:Photosystem I reaction center subunit N%2C chloroplastic,CC_functional_completeness:complete,CC_gene:PSAN;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031977001~ Photosystem I reaction center subunit N%2C chloroplastic~ PSAN~ complete;original_location=join(1949854..1950147%2C1950269..1950394%2C1950496..1950585);owner=coffea | |
| 47774 chr10 manual_curation exon 22219282 22219787 . + . Parent=GSCOCT00031977001 | |
| 47775 chr10 manual_curation exon 22219909 22220034 . + . Parent=GSCOCT00031977001 | |
| 47776 chr10 manual_curation exon 22220136 22221126 . + . Parent=GSCOCT00031977001 | |
| 47777 chr10 manual_curation CDS 22219494 22219787 . + 0 Parent=GSCOCT00031977001 | |
| 47778 chr10 manual_curation CDS 22219909 22220034 . + 0 Parent=GSCOCT00031977001 | |
| 47779 chr10 manual_curation CDS 22220136 22220225 . + 0 Parent=GSCOCT00031977001 | |
| 47780 chr10 manual_curation gene 22221910 22225913 . - . ID=GSCOCG00031978001;Name=Cc10_g12600 | |
| 47781 chr10 manual_curation mRNA 22221910 22225913 . - . ID=GSCOCT00031978001;Parent=GSCOCG00031978001;Name=Cc10_g12600 | |
| 47782 chr10 manual_curation polypeptide 22222225 22224165 . - . ID=GSCOCP00031978001;Dbxref=HAMAP:MF_00321,InterPro:IPR002917,InterPro:IPR019987,PFAM:PF01926,SwissProt:O81004,SwissProt:Q5LDL2,SwissProt:Q64UN4,TAIR:AT2G22870.1,TAIR:AT5G11480.1,TAIR:AT5G58370.2,TIGRFAMs:TIGR03598,TrEMBL:B9HFZ3,TrEMBL:B9SH28,TrEMBL:D7LE52;Derives_from=GSCOCT00031978001;Name=Cc10_g12600;Ontology_term=CC_evidence_code:ISS,GO:0000917,GO:0005525,GO:0005622,CC_EC_number:missing_EC_number,PRODUCT:GTP-binding protein At2g22870,CC_functional_completeness:complete,CC_gene:EMB2001,CC_gene:engB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031978001~ GTP-binding protein At2g22870~ EMB2001~ complete;original_location=complement(join(1954153..1954525%2C1953991..1954060%2C1952972..1953134%2C1952585..1952797));owner=coffea | |
| 47783 chr10 manual_curation exon 22224988 22225107 . - . Parent=GSCOCT00031978001 | |
| 47784 chr10 manual_curation exon 22225751 22225913 . - . Parent=GSCOCT00031978001 | |
| 47785 chr10 manual_curation exon 22221910 22222437 . - . Parent=GSCOCT00031978001 | |
| 47786 chr10 manual_curation exon 22222612 22222774 . - . Parent=GSCOCT00031978001 | |
| 47787 chr10 manual_curation exon 22223631 22223700 . - . Parent=GSCOCT00031978001 | |
| 47788 chr10 manual_curation exon 22223793 22224327 . - . Parent=GSCOCT00031978001 | |
| 47789 chr10 manual_curation CDS 22222225 22222437 . - 0 Parent=GSCOCT00031978001 | |
| 47790 chr10 manual_curation CDS 22222612 22222774 . - 2 Parent=GSCOCT00031978001 | |
| 47791 chr10 manual_curation CDS 22223631 22223700 . - 1 Parent=GSCOCT00031978001 | |
| 47792 chr10 manual_curation CDS 22223793 22224165 . - 0 Parent=GSCOCT00031978001 | |
| 47793 chr10 manual_curation gene 22229603 22230889 . + . ID=GSCOCG00031979001;Name=Cc10_g12610 | |
| 47794 chr10 manual_curation mRNA 22229603 22230889 . + . ID=GSCOCT00031979001;Parent=GSCOCG00031979001;Name=Cc10_g12610 | |
| 47795 chr10 manual_curation polypeptide 22229603 22230601 . + . ID=GSCOCP00031979001;Dbxref=TAIR:AT1G31130.1,TAIR:AT4G19950.1,TAIR:AT5G44860.1,TrEMBL:B9HES3,TrEMBL:B9HES4,TrEMBL:F6I0D7;Derives_from=GSCOCT00031979001;Name=Cc10_g12610;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031979001~ Putative unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44860.1)%3B Has 338 Blast hits to 330 proteins in 72 species: Archae - 2%3B Bacteria - 94%3B Metazoa - 7%3B Fungi - 0%3B Plants - 232%3B Viruses - 0%3B Other Eukaryotes - 3 (source: NCBI BLink).~ unknown_gene~ complete;original_location=1959963..1960961;owner=coffea | |
| 47796 chr10 manual_curation exon 22229603 22230889 . + . Parent=GSCOCT00031979001 | |
| 47797 chr10 manual_curation CDS 22229603 22230601 . + 0 Parent=GSCOCT00031979001 | |
| 47798 chr10 manual_curation gene 22232061 22234388 . + . ID=GSCOCG00031980001;Name=Cc10_g12620 | |
| 47799 chr10 manual_curation mRNA 22232061 22234388 . + . ID=GSCOCT00031980001;Parent=GSCOCG00031980001;Name=Cc10_g12620 | |
| 47800 chr10 manual_curation polypeptide 22232061 22234388 . + . ID=GSCOCP00031980001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:P0C894,SwissProt:Q9FIX3,SwissProt:Q9ZUA2,TAIR:AT2G01740.1,TAIR:AT2G02150.1,TAIR:AT5G39710.1,TIGRFAMs:TIGR00756,TrEMBL:B9HVM9,TrEMBL:B9RY36,TrEMBL:I1KRM7;Derives_from=GSCOCT00031980001;Name=Cc10_g12620;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative pentatricopeptide repeat-containing protein At2g02150,CC_functional_completeness:complete,CC_gene:At2g02150,CC_gene:At2g01740,CC_gene:EMB2745;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031980001~ Putative pentatricopeptide repeat-containing protein At2g02150~ At2g02150~ complete;original_location=1962421..1964748;owner=coffea | |
| 47801 chr10 manual_curation exon 22232061 22234388 . + . Parent=GSCOCT00031980001 | |
| 47802 chr10 manual_curation CDS 22232061 22234388 . + 0 Parent=GSCOCT00031980001 | |
| 47803 chr10 manual_curation gene 22243121 22251010 . + . ID=GSCOCG00031982001;Name=Cc10_g12630 | |
| 47804 chr10 manual_curation mRNA 22243121 22251010 . + . ID=GSCOCT00031982001;Parent=GSCOCG00031982001;Name=Cc10_g12630 | |
| 47805 chr10 manual_curation polypeptide 22244330 22250532 . + . ID=GSCOCP00031982001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019781,InterPro:IPR019782,PFAM:PF00400,PROFILE:PS50082,PROFILE:PS50294,SMART:SM00320,SUPERFAMILY:SSF50978,TAIR:AT1G21650.3,TAIR:AT1G21651.1,TAIR:AT5G50120.1,TrEMBL:F6H0I6,TrEMBL:I1KAD9,TrEMBL:I1KAE0;Derives_from=GSCOCT00031982001;Name=Cc10_g12630;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative zinc ion binding,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031982001~ Putative zinc ion binding~ unknown_gene~ fragment;original_location=join(1974690..1975188%2C1975693..1975748%2C1977286..1977533%2C1977609..1977882%2C1978161..1978280%2C1978618..1978746%2C1980872..1980892);owner=coffea | |
| 47806 chr10 manual_curation exon 22243121 22244828 . + . Parent=GSCOCT00031982001 | |
| 47807 chr10 manual_curation exon 22245333 22245388 . + . Parent=GSCOCT00031982001 | |
| 47808 chr10 manual_curation exon 22246926 22247173 . + . Parent=GSCOCT00031982001 | |
| 47809 chr10 manual_curation exon 22247249 22247522 . + . Parent=GSCOCT00031982001 | |
| 47810 chr10 manual_curation exon 22247801 22247920 . + . Parent=GSCOCT00031982001 | |
| 47811 chr10 manual_curation exon 22248258 22248386 . + . Parent=GSCOCT00031982001 | |
| 47812 chr10 manual_curation exon 22250512 22251010 . + . Parent=GSCOCT00031982001 | |
| 47813 chr10 manual_curation CDS 22244330 22244828 . + 0 Parent=GSCOCT00031982001 | |
| 47814 chr10 manual_curation CDS 22245333 22245388 . + 1 Parent=GSCOCT00031982001 | |
| 47815 chr10 manual_curation CDS 22246926 22247173 . + 0 Parent=GSCOCT00031982001 | |
| 47816 chr10 manual_curation CDS 22247249 22247522 . + 2 Parent=GSCOCT00031982001 | |
| 47817 chr10 manual_curation CDS 22247801 22247920 . + 0 Parent=GSCOCT00031982001 | |
| 47818 chr10 manual_curation CDS 22248258 22248386 . + 0 Parent=GSCOCT00031982001 | |
| 47819 chr10 manual_curation CDS 22250512 22250532 . + 0 Parent=GSCOCT00031982001 | |
| 47820 chr10 manual_curation gene 22254031 22257964 . + . ID=GSCOCG00031983001;Name=Cc10_g12640 | |
| 47821 chr10 manual_curation mRNA 22254031 22257964 . + . ID=GSCOCT00031983001;Parent=GSCOCG00031983001;Name=Cc10_g12640 | |
| 47822 chr10 manual_curation polypeptide 22254326 22257732 . + . ID=GSCOCP00031983001;Dbxref=GENE3D:G3DSA:3.40.640.10,InterPro:IPR004639,InterPro:IPR005814,InterPro:IPR015421,InterPro:IPR015424,PANTHER:PTHR11986,PFAM:PF00202,PROSITE:PS00600,SUPERFAMILY:SSF53383,SwissProt:P31593,SwissProt:Q40147,SwissProt:Q85WB7,TAIR:AT3G48730.1,TAIR:AT5G46180.1,TAIR:AT5G63570.1,TIGRFAMs:TIGR00713,TrEMBL:A5BEM6,TrEMBL:B9IFG3,TrEMBL:B9SLG6;Derives_from=GSCOCT00031983001;Name=Cc10_g12640;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008483,GO:0030170,GO:0033014,CC_EC_number:5.4.3.8,PRODUCT:Glutamate-1-semialdehyde 2%2C1-aminomutase%2C chloroplastic,CC_functional_completeness:complete,CC_gene:GSA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031983001~ Glutamate-1-semialdehyde 2%2C1-aminomutase%2C chloroplastic~ GSA~ complete;original_location=join(1984686..1984763%2C1986326..1986499%2C1987031..1988092);owner=coffea | |
| 47823 chr10 manual_curation exon 22254031 22254403 . + . Parent=GSCOCT00031983001 | |
| 47824 chr10 manual_curation exon 22255966 22256139 . + . Parent=GSCOCT00031983001 | |
| 47825 chr10 manual_curation exon 22256671 22257964 . + . Parent=GSCOCT00031983001 | |
| 47826 chr10 manual_curation CDS 22254326 22254403 . + 0 Parent=GSCOCT00031983001 | |
| 47827 chr10 manual_curation CDS 22255966 22256139 . + 0 Parent=GSCOCT00031983001 | |
| 47828 chr10 manual_curation CDS 22256671 22257732 . + 0 Parent=GSCOCT00031983001 | |
| 47829 chr10 manual_curation gene 22259161 22261188 . + . ID=GSCOCG00031984001;Name=Cc10_g12650 | |
| 47830 chr10 manual_curation mRNA 22259161 22261188 . + . ID=GSCOCT00031984001;Parent=GSCOCG00031984001;Name=Cc10_g12650 | |
| 47831 chr10 manual_curation polypeptide 22259161 22261188 . + . ID=GSCOCP00031984001;Dbxref=GENE3D:G3DSA:1.20.58.150,GENE3D:G3DSA:1.25.40.90,InterPro:IPR008942,InterPro:IPR011417,InterPro:IPR013809,InterPro:IPR014712,PFAM:PF07651,PROFILE:PS50942,SMART:SM00273,SUPERFAMILY:SSF48464,SwissProt:Q8S9J8,SwissProt:Q9SA65,SwissProt:Q9ZVN6,TAIR:AT1G03050.1,TAIR:AT1G05020.1,TAIR:AT4G32285.1,TrEMBL:B9GTT5,TrEMBL:B9GTT6,TrEMBL:D7TEE0;Derives_from=GSCOCT00031984001;Name=Cc10_g12650;Ontology_term=CC_evidence_code:ISS,GO:0005543,GO:0005545,GO:0030118,GO:0030276,GO:0048268,CC_EC_number:missing_EC_number,PRODUCT:Clathrin coat assembly protein AP180,CC_functional_completeness:complete,CC_gene:AP180,CC_gene:At4g32285,CC_gene:At1g03050;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031984001~ Clathrin coat assembly protein AP180~ AP180~ complete;original_location=join(1989521..1990933%2C1991060..1991548);owner=coffea | |
| 47832 chr10 manual_curation exon 22259161 22260573 . + . Parent=GSCOCT00031984001 | |
| 47833 chr10 manual_curation exon 22260700 22261188 . + . Parent=GSCOCT00031984001 | |
| 47834 chr10 manual_curation CDS 22259161 22260573 . + 0 Parent=GSCOCT00031984001 | |
| 47835 chr10 manual_curation CDS 22260700 22261188 . + 0 Parent=GSCOCT00031984001 | |
| 47836 chr10 manual_curation gene 22261823 22272930 . + . ID=GSCOCG00031985001;Name=Cc10_g12660 | |
| 47837 chr10 manual_curation mRNA 22261823 22272930 . + . ID=GSCOCT00031985001;Parent=GSCOCG00031985001;Name=Cc10_g12660 | |
| 47838 chr10 manual_curation polypeptide 22261823 22272700 . + . ID=GSCOCP00031985001;Dbxref=HAMAP:MF_01382,InterPro:IPR000185,InterPro:IPR011115,InterPro:IPR011130,InterPro:IPR014018,InterPro:IPR020937,PFAM:PF01043,PFAM:PF07517,PRINTS:PR00906,PROFILE:PS51196,PROSITE:PS01312,SUPERFAMILY:SSF81767,SwissProt:D8WUA4,SwissProt:Q2JJ09,SwissProt:Q8DHU4,TAIR:AT1G21650.3,TAIR:AT4G01800.2,TrEMBL:A3C9G1,TrEMBL:B9GTZ6,TrEMBL:D7KK34,TrEMBL:F2DXZ0,TrEMBL:F4HY36,TrEMBL:I1IMT8;Derives_from=GSCOCT00031985001;Name=Cc10_g12660;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0005524,GO:0006605,GO:0006886,GO:0016020,GO:0017038,CC_EC_number:missing_EC_number,PRODUCT:Protein translocase subunit SECA2%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:SECA2,CC_gene:secA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031985001~ Protein translocase subunit SECA2%2C chloroplastic~ SECA2~ fragment;original_location=join(1992183..1992392%2C1992473..1992625%2C1992733..1992802%2C1993371..1993435%2C1993606..1993726%2C1993915..1994006%2C1995648..1995713%2C1995906..1995970%2C1996048..1996135%2C1996265..1996330%2C1996439..1996554%2C1998638..1998728%2C2000272..2000355%2C2000445..2000537%2C2000617..2000712%2C2000825..2000910%2C2002628..2002706%2C2002851..2002968%2C2003026..2003060);owner=coffea | |
| 47839 chr10 manual_curation exon 22261823 22262032 . + . Parent=GSCOCT00031985001 | |
| 47840 chr10 manual_curation exon 22262113 22262265 . + . Parent=GSCOCT00031985001 | |
| 47841 chr10 manual_curation exon 22262373 22262442 . + . Parent=GSCOCT00031985001 | |
| 47842 chr10 manual_curation exon 22263011 22263075 . + . Parent=GSCOCT00031985001 | |
| 47843 chr10 manual_curation exon 22263246 22263366 . + . Parent=GSCOCT00031985001 | |
| 47844 chr10 manual_curation exon 22263555 22263646 . + . Parent=GSCOCT00031985001 | |
| 47845 chr10 manual_curation exon 22265288 22265353 . + . Parent=GSCOCT00031985001 | |
| 47846 chr10 manual_curation exon 22265546 22265610 . + . Parent=GSCOCT00031985001 | |
| 47847 chr10 manual_curation exon 22265688 22265775 . + . Parent=GSCOCT00031985001 | |
| 47848 chr10 manual_curation exon 22265905 22265970 . + . Parent=GSCOCT00031985001 | |
| 47849 chr10 manual_curation exon 22266079 22266194 . + . Parent=GSCOCT00031985001 | |
| 47850 chr10 manual_curation exon 22268278 22268368 . + . Parent=GSCOCT00031985001 | |
| 47851 chr10 manual_curation exon 22269912 22269995 . + . Parent=GSCOCT00031985001 | |
| 47852 chr10 manual_curation exon 22270085 22270177 . + . Parent=GSCOCT00031985001 | |
| 47853 chr10 manual_curation exon 22270257 22270352 . + . Parent=GSCOCT00031985001 | |
| 47854 chr10 manual_curation exon 22270465 22270550 . + . Parent=GSCOCT00031985001 | |
| 47855 chr10 manual_curation exon 22272268 22272346 . + . Parent=GSCOCT00031985001 | |
| 47856 chr10 manual_curation exon 22272491 22272608 . + . Parent=GSCOCT00031985001 | |
| 47857 chr10 manual_curation exon 22272666 22272930 . + . Parent=GSCOCT00031985001 | |
| 47858 chr10 manual_curation CDS 22261823 22262032 . + 0 Parent=GSCOCT00031985001 | |
| 47859 chr10 manual_curation CDS 22262113 22262265 . + 0 Parent=GSCOCT00031985001 | |
| 47860 chr10 manual_curation CDS 22262373 22262442 . + 0 Parent=GSCOCT00031985001 | |
| 47861 chr10 manual_curation CDS 22263011 22263075 . + 1 Parent=GSCOCT00031985001 | |
| 47862 chr10 manual_curation CDS 22263246 22263366 . + 0 Parent=GSCOCT00031985001 | |
| 47863 chr10 manual_curation CDS 22263555 22263646 . + 1 Parent=GSCOCT00031985001 | |
| 47864 chr10 manual_curation CDS 22265288 22265353 . + 0 Parent=GSCOCT00031985001 | |
| 47865 chr10 manual_curation CDS 22265546 22265610 . + 0 Parent=GSCOCT00031985001 | |
| 47866 chr10 manual_curation CDS 22265688 22265775 . + 2 Parent=GSCOCT00031985001 | |
| 47867 chr10 manual_curation CDS 22265905 22265970 . + 0 Parent=GSCOCT00031985001 | |
| 47868 chr10 manual_curation CDS 22266079 22266194 . + 0 Parent=GSCOCT00031985001 | |
| 47869 chr10 manual_curation CDS 22268278 22268368 . + 2 Parent=GSCOCT00031985001 | |
| 47870 chr10 manual_curation CDS 22269912 22269995 . + 0 Parent=GSCOCT00031985001 | |
| 47871 chr10 manual_curation CDS 22270085 22270177 . + 0 Parent=GSCOCT00031985001 | |
| 47872 chr10 manual_curation CDS 22270257 22270352 . + 0 Parent=GSCOCT00031985001 | |
| 47873 chr10 manual_curation CDS 22270465 22270550 . + 0 Parent=GSCOCT00031985001 | |
| 47874 chr10 manual_curation CDS 22272268 22272346 . + 2 Parent=GSCOCT00031985001 | |
| 47875 chr10 manual_curation CDS 22272491 22272608 . + 0 Parent=GSCOCT00031985001 | |
| 47876 chr10 manual_curation CDS 22272666 22272700 . + 1 Parent=GSCOCT00031985001 | |
| 47877 chr10 manual_curation gene 22273123 22274513 . + . ID=GSCOCG00031986001;Name=Cc10_g12670 | |
| 47878 chr10 manual_curation mRNA 22273123 22274513 . + . ID=GSCOCT00031986001;Parent=GSCOCG00031986001;Name=Cc10_g12670 | |
| 47879 chr10 manual_curation polypeptide 22273123 22274513 . + . ID=GSCOCP00031986001;Dbxref=InterPro:IPR014018,PROFILE:PS51196,SwissProt:A1AM15,SwissProt:D8WUA4,SwissProt:Q55709,TAIR:AT1G21650.3,TAIR:AT4G01800.2,TrEMBL:B9S2U6,TrEMBL:E6NU73,TrEMBL:F6H0I5;Derives_from=GSCOCT00031986001;Name=Cc10_g12670;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein translocase subunit SECA2%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:SECA2,CC_gene:secA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031986001~ Protein translocase subunit SECA2%2C chloroplastic~ SECA2~ fragment;original_location=join(2003483..2003534%2C2003668..2003954%2C2004814..2004873);owner=coffea | |
| 47880 chr10 manual_curation exon 22273123 22273174 . + . Parent=GSCOCT00031986001 | |
| 47881 chr10 manual_curation exon 22273308 22273594 . + . Parent=GSCOCT00031986001 | |
| 47882 chr10 manual_curation exon 22274454 22274513 . + . Parent=GSCOCT00031986001 | |
| 47883 chr10 manual_curation CDS 22273123 22273174 . + 0 Parent=GSCOCT00031986001 | |
| 47884 chr10 manual_curation CDS 22273308 22273594 . + 1 Parent=GSCOCT00031986001 | |
| 47885 chr10 manual_curation CDS 22274454 22274513 . + 0 Parent=GSCOCT00031986001 | |
| 47886 chr10 manual_curation gene 22280301 22285815 . + . ID=GSCOCG00031987001;Name=Cc10_g12680 | |
| 47887 chr10 manual_curation mRNA 22280301 22285815 . + . ID=GSCOCT00031987001;Parent=GSCOCG00031987001;Name=Cc10_g12680 | |
| 47888 chr10 manual_curation polypeptide 22280301 22283912 . + . ID=GSCOCP00031987001;Dbxref=GENE3D:G3DSA:1.10.3060.10,InterPro:IPR011116,PFAM:PF07516,SUPERFAMILY:SSF81886,SwissProt:B0C1V9,SwissProt:D8WUA4,SwissProt:Q7NJJ6,TAIR:AT1G21650.3,TAIR:AT4G01800.2,TrEMBL:B9GTZ6,TrEMBL:F6H0I5,TrEMBL:I1KAE1;Derives_from=GSCOCT00031987001;Name=Cc10_g12680;Ontology_term=CC_evidence_code:ISS,GO:0016020,GO:0017038,CC_EC_number:missing_EC_number,PRODUCT:Protein translocase subunit SECA2%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:SECA2,CC_gene:secA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031987001~ Protein translocase subunit SECA2%2C chloroplastic~ SECA2~ fragment;original_location=join(2010661..2010775%2C2010838..2010974%2C2011192..2011272%2C2011463..2011542%2C2012827..2012881%2C2012990..2013059%2C2013150..2013339%2C2013435..2013558%2C2013958..2014032%2C2014111..2014272);owner=coffea | |
| 47889 chr10 manual_curation exon 22285096 22285815 . + . Parent=GSCOCT00031987001 | |
| 47890 chr10 manual_curation exon 22280301 22280415 . + . Parent=GSCOCT00031987001 | |
| 47891 chr10 manual_curation exon 22280478 22280614 . + . Parent=GSCOCT00031987001 | |
| 47892 chr10 manual_curation exon 22280832 22280912 . + . Parent=GSCOCT00031987001 | |
| 47893 chr10 manual_curation exon 22281103 22281182 . + . Parent=GSCOCT00031987001 | |
| 47894 chr10 manual_curation exon 22282467 22282521 . + . Parent=GSCOCT00031987001 | |
| 47895 chr10 manual_curation exon 22282630 22282699 . + . Parent=GSCOCT00031987001 | |
| 47896 chr10 manual_curation exon 22282790 22282979 . + . Parent=GSCOCT00031987001 | |
| 47897 chr10 manual_curation exon 22283075 22283198 . + . Parent=GSCOCT00031987001 | |
| 47898 chr10 manual_curation exon 22283598 22283672 . + . Parent=GSCOCT00031987001 | |
| 47899 chr10 manual_curation exon 22283751 22283944 . + . Parent=GSCOCT00031987001 | |
| 47900 chr10 manual_curation CDS 22280301 22280415 . + 0 Parent=GSCOCT00031987001 | |
| 47901 chr10 manual_curation CDS 22280478 22280614 . + 1 Parent=GSCOCT00031987001 | |
| 47902 chr10 manual_curation CDS 22280832 22280912 . + 0 Parent=GSCOCT00031987001 | |
| 47903 chr10 manual_curation CDS 22281103 22281182 . + 0 Parent=GSCOCT00031987001 | |
| 47904 chr10 manual_curation CDS 22282467 22282521 . + 2 Parent=GSCOCT00031987001 | |
| 47905 chr10 manual_curation CDS 22282630 22282699 . + 0 Parent=GSCOCT00031987001 | |
| 47906 chr10 manual_curation CDS 22282790 22282979 . + 1 Parent=GSCOCT00031987001 | |
| 47907 chr10 manual_curation CDS 22283075 22283198 . + 2 Parent=GSCOCT00031987001 | |
| 47908 chr10 manual_curation CDS 22283598 22283672 . + 0 Parent=GSCOCT00031987001 | |
| 47909 chr10 manual_curation CDS 22283751 22283912 . + 0 Parent=GSCOCT00031987001 | |
| 47910 chr10 manual_curation gene 22285931 22288599 . - . ID=GSCOCG00031988001;Name=Cc10_g12690 | |
| 47911 chr10 manual_curation mRNA 22285931 22288599 . - . ID=GSCOCT00031988001;Parent=GSCOCG00031988001;Name=Cc10_g12690 | |
| 47912 chr10 manual_curation polypeptide 22285931 22288599 . - . ID=GSCOCP00031988001;Dbxref=InterPro:IPR002293,InterPro:IPR004841,PANTHER:PTHR11785,PFAM:PF00324,SwissProt:P32837,SwissProt:Q09887,SwissProt:Q10087,TAIR:AT2G01170.1,TrEMBL:B9S2U5,TrEMBL:E0CR17,TrEMBL:E6NU75;Derives_from=GSCOCT00031988001;Name=Cc10_g12690;Ontology_term=CC_evidence_code:ISS,GO:0006810,GO:0006865,GO:0015171,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized amino-acid permease C584.13,CC_functional_completeness:fragment,CC_gene:SPCC584.13,CC_gene:UGA4,CC_gene:SPAC11D3.08c;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031988001~ Putative Uncharacterized amino-acid permease C584.13~ SPCC584.13~ fragment;original_location=complement(join(2018870..2018959%2C2018527..2018706%2C2018230..2018349%2C2017705..2017896%2C2016620..2016925%2C2016291..2016500));owner=coffea | |
| 47913 chr10 manual_curation exon 22285931 22286140 . - . Parent=GSCOCT00031988001 | |
| 47914 chr10 manual_curation exon 22286260 22286565 . - . Parent=GSCOCT00031988001 | |
| 47915 chr10 manual_curation exon 22287345 22287536 . - . Parent=GSCOCT00031988001 | |
| 47916 chr10 manual_curation exon 22287870 22287989 . - . Parent=GSCOCT00031988001 | |
| 47917 chr10 manual_curation exon 22288167 22288346 . - . Parent=GSCOCT00031988001 | |
| 47918 chr10 manual_curation exon 22288510 22288599 . - . Parent=GSCOCT00031988001 | |
| 47919 chr10 manual_curation CDS 22285931 22286140 . - 0 Parent=GSCOCT00031988001 | |
| 47920 chr10 manual_curation CDS 22286260 22286565 . - 0 Parent=GSCOCT00031988001 | |
| 47921 chr10 manual_curation CDS 22287345 22287536 . - 0 Parent=GSCOCT00031988001 | |
| 47922 chr10 manual_curation CDS 22287870 22287989 . - 0 Parent=GSCOCT00031988001 | |
| 47923 chr10 manual_curation CDS 22288167 22288346 . - 0 Parent=GSCOCT00031988001 | |
| 47924 chr10 manual_curation CDS 22288510 22288599 . - 0 Parent=GSCOCT00031988001 | |
| 47925 chr10 manual_curation gene 22294266 22299756 . - . ID=GSCOCG00031989001;Name=Cc10_g12700 | |
| 47926 chr10 manual_curation mRNA 22294266 22299756 . - . ID=GSCOCT00031989001;Parent=GSCOCG00031989001;Name=Cc10_g12700 | |
| 47927 chr10 manual_curation polypeptide 22294471 22299686 . - . ID=GSCOCP00031989001;Dbxref=InterPro:IPR018816,InterPro:IPR019134,PFAM:PF09732,PFAM:PF10312,SwissProt:O14342,SwissProt:Q8WUQ7,SwissProt:Q9CS00,TAIR:AT1G03910.2,TAIR:AT2G36815.1,TrEMBL:D7TIX5,TrEMBL:G7L4Y2,TrEMBL:I1NAG1;Derives_from=GSCOCT00031989001;Name=Cc10_g12700;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized protein C19orf29,CC_functional_completeness:fragment,CC_gene:C19orf29,CC_gene:SPBC2F12.12c;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031989001~ Putative Uncharacterized protein C19orf29~ C19orf29~ fragment;original_location=complement(join(2030032..2030046%2C2029867..2029929%2C2029554..2029694%2C2028356..2028451%2C2026141..2026425%2C2025924..2026059%2C2025701..2025843%2C2025416..2025583%2C2025057..2025323%2C2024831..2024950));owner=coffea | |
| 47928 chr10 manual_curation exon 22294266 22294590 . - . Parent=GSCOCT00031989001 | |
| 47929 chr10 manual_curation exon 22294697 22294963 . - . Parent=GSCOCT00031989001 | |
| 47930 chr10 manual_curation exon 22295056 22295223 . - . Parent=GSCOCT00031989001 | |
| 47931 chr10 manual_curation exon 22295341 22295483 . - . Parent=GSCOCT00031989001 | |
| 47932 chr10 manual_curation exon 22295564 22295699 . - . Parent=GSCOCT00031989001 | |
| 47933 chr10 manual_curation exon 22295781 22296065 . - . Parent=GSCOCT00031989001 | |
| 47934 chr10 manual_curation exon 22297996 22298091 . - . Parent=GSCOCT00031989001 | |
| 47935 chr10 manual_curation exon 22299194 22299334 . - . Parent=GSCOCT00031989001 | |
| 47936 chr10 manual_curation exon 22299507 22299569 . - . Parent=GSCOCT00031989001 | |
| 47937 chr10 manual_curation exon 22299672 22299756 . - . Parent=GSCOCT00031989001 | |
| 47938 chr10 manual_curation CDS 22294471 22294590 . - 0 Parent=GSCOCT00031989001 | |
| 47939 chr10 manual_curation CDS 22294697 22294963 . - 0 Parent=GSCOCT00031989001 | |
| 47940 chr10 manual_curation CDS 22295056 22295223 . - 0 Parent=GSCOCT00031989001 | |
| 47941 chr10 manual_curation CDS 22295341 22295483 . - 1 Parent=GSCOCT00031989001 | |
| 47942 chr10 manual_curation CDS 22295564 22295699 . - 0 Parent=GSCOCT00031989001 | |
| 47943 chr10 manual_curation CDS 22295781 22296065 . - 0 Parent=GSCOCT00031989001 | |
| 47944 chr10 manual_curation CDS 22297996 22298091 . - 0 Parent=GSCOCT00031989001 | |
| 47945 chr10 manual_curation CDS 22299194 22299334 . - 0 Parent=GSCOCT00031989001 | |
| 47946 chr10 manual_curation CDS 22299507 22299569 . - 0 Parent=GSCOCT00031989001 | |
| 47947 chr10 manual_curation CDS 22299672 22299686 . - 0 Parent=GSCOCT00031989001 | |
| 47948 chr10 manual_curation gene 22354243 22355562 . + . ID=GSCOCG00031990001;Name=Cc10_g12710 | |
| 47949 chr10 manual_curation mRNA 22354243 22355562 . + . ID=GSCOCT00031990001;Parent=GSCOCG00031990001;Name=Cc10_g12710 | |
| 47950 chr10 manual_curation polypeptide 22354243 22355562 . + . ID=GSCOCP00031990001;Dbxref=InterPro:IPR005123,PFAM:PF03171,SwissProt:Q00985,SwissProt:Q0WPW4,SwissProt:Q9FR99,TAIR:AT1G05010.1,TAIR:AT1G62380.1,TAIR:AT1G77330.1,TrEMBL:C6TH79,TrEMBL:I1JZ19,TrEMBL:Q84L58;Derives_from=GSCOCT00031990001;Name=Cc10_g12710;Ontology_term=CC_evidence_code:ISS,GO:0016491,CC_EC_number:1.14.17.4,PRODUCT:1-aminocyclopropane-1-carboxylate oxidase 5,CC_functional_completeness:complete,CC_gene:At1g77330,CC_gene:MAO1B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031990001~ 1-aminocyclopropane-1-carboxylate oxidase 5~ At1g77330~ complete;original_location=join(2084603..2084704%2C2084800..2085032%2C2085316..2085922);owner=coffea | |
| 47951 chr10 manual_curation exon 22354243 22354344 . + . Parent=GSCOCT00031990001 | |
| 47952 chr10 manual_curation exon 22354440 22354672 . + . Parent=GSCOCT00031990001 | |
| 47953 chr10 manual_curation exon 22354956 22355562 . + . Parent=GSCOCT00031990001 | |
| 47954 chr10 manual_curation CDS 22354243 22354344 . + 0 Parent=GSCOCT00031990001 | |
| 47955 chr10 manual_curation CDS 22354440 22354672 . + 0 Parent=GSCOCT00031990001 | |
| 47956 chr10 manual_curation CDS 22354956 22355562 . + 2 Parent=GSCOCT00031990001 | |
| 47957 chr10 manual_curation gene 22364331 22365985 . + . ID=GSCOCG00031991001;Name=Cc10_g12720 | |
| 47958 chr10 manual_curation mRNA 22364331 22365985 . + . ID=GSCOCT00031991001;Parent=GSCOCG00031991001;Name=Cc10_g12720 | |
| 47959 chr10 manual_curation polypeptide 22364331 22365985 . + . ID=GSCOCP00031991001;Dbxref=InterPro:IPR005123,PFAM:PF03171,SwissProt:P31237,SwissProt:Q0WPW4,SwissProt:Q9FR99,TAIR:AT1G12010.1,TAIR:AT1G62380.1,TAIR:AT1G77330.1,TrEMBL:C6TH79,TrEMBL:C6TNQ1,TrEMBL:I1JZ19;Derives_from=GSCOCT00031991001;Name=Cc10_g12720;Ontology_term=CC_evidence_code:ISS,GO:0016491,CC_EC_number:1.14.17.4,PRODUCT:1-aminocyclopropane-1-carboxylate oxidase 5,CC_functional_completeness:complete,CC_gene:At1g77330,CC_gene:MAO1B,CC_gene:ACO;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031991001~ 1-aminocyclopropane-1-carboxylate oxidase 5~ At1g77330~ complete;original_location=join(2094691..2094792%2C2095052..2095284%2C2095739..2096345);owner=coffea | |
| 47960 chr10 manual_curation exon 22364331 22364432 . + . Parent=GSCOCT00031991001 | |
| 47961 chr10 manual_curation exon 22364692 22364924 . + . Parent=GSCOCT00031991001 | |
| 47962 chr10 manual_curation exon 22365379 22365985 . + . Parent=GSCOCT00031991001 | |
| 47963 chr10 manual_curation CDS 22364331 22364432 . + 0 Parent=GSCOCT00031991001 | |
| 47964 chr10 manual_curation CDS 22364692 22364924 . + 0 Parent=GSCOCT00031991001 | |
| 47965 chr10 manual_curation CDS 22365379 22365985 . + 2 Parent=GSCOCT00031991001 | |
| 47966 chr10 manual_curation gene 22367803 22373946 . - . ID=GSCOCG00031992001;Name=Cc10_g12730 | |
| 47967 chr10 manual_curation mRNA 22367803 22373946 . - . ID=GSCOCT00031992001;Parent=GSCOCG00031992001;Name=Cc10_g12730 | |
| 47968 chr10 manual_curation polypeptide 22367976 22373946 . - . ID=GSCOCP00031992001;Dbxref=GENE3D:G3DSA:2.60.200.30,GENE3D:G3DSA:3.40.50.10330,InterPro:IPR002504,InterPro:IPR016064,InterPro:IPR017437,InterPro:IPR017438,PANTHER:PTHR20275,PFAM:PF01513,SUPERFAMILY:SSF111331,SwissProt:Q56YN3,SwissProt:Q9C5W3,TAIR:AT1G21640.2,TAIR:AT3G21070.1,TrEMBL:B9S2U3,TrEMBL:E6NU77,TrEMBL:F6H0I3;Derives_from=GSCOCT00031992001;Name=Cc10_g12730;Ontology_term=CC_evidence_code:ISS,GO:0003951,GO:0008152,CC_EC_number:2.7.1.23,PRODUCT:NAD kinase 2%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:NADK2,CC_gene:Os11g0191400,CC_gene:NADK1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031992001~ NAD kinase 2%2C chloroplastic~ NADK2~ fragment;original_location=complement(join(2103710..2104306%2C2102200..2102321%2C2101918..2102059%2C2101615..2101839%2C2101455..2101529%2C2099255..2099356%2C2098336..2098539));owner=coffea | |
| 47969 chr10 manual_curation exon 22367803 22368179 . - . Parent=GSCOCT00031992001 | |
| 47970 chr10 manual_curation exon 22368895 22368996 . - . Parent=GSCOCT00031992001 | |
| 47971 chr10 manual_curation exon 22371095 22371169 . - . Parent=GSCOCT00031992001 | |
| 47972 chr10 manual_curation exon 22371255 22371479 . - . Parent=GSCOCT00031992001 | |
| 47973 chr10 manual_curation exon 22371558 22371699 . - . Parent=GSCOCT00031992001 | |
| 47974 chr10 manual_curation exon 22371840 22371961 . - . Parent=GSCOCT00031992001 | |
| 47975 chr10 manual_curation exon 22373350 22373946 . - . Parent=GSCOCT00031992001 | |
| 47976 chr10 manual_curation CDS 22367976 22368179 . - 0 Parent=GSCOCT00031992001 | |
| 47977 chr10 manual_curation CDS 22368895 22368996 . - 0 Parent=GSCOCT00031992001 | |
| 47978 chr10 manual_curation CDS 22371095 22371169 . - 0 Parent=GSCOCT00031992001 | |
| 47979 chr10 manual_curation CDS 22371255 22371479 . - 0 Parent=GSCOCT00031992001 | |
| 47980 chr10 manual_curation CDS 22371558 22371699 . - 2 Parent=GSCOCT00031992001 | |
| 47981 chr10 manual_curation CDS 22371840 22371961 . - 0 Parent=GSCOCT00031992001 | |
| 47982 chr10 manual_curation CDS 22373350 22373946 . - 0 Parent=GSCOCT00031992001 | |
| 47983 chr10 manual_curation gene 22374059 22376949 . - . ID=GSCOCG00031993001;Name=Cc10_g12740 | |
| 47984 chr10 manual_curation mRNA 22374059 22376949 . - . ID=GSCOCT00031993001;Parent=GSCOCG00031993001;Name=Cc10_g12740 | |
| 47985 chr10 manual_curation polypeptide 22374170 22376738 . - . ID=GSCOCP00031993001;Dbxref=SwissProt:Q53NI2,SwissProt:Q9C5W3,TAIR:AT1G21640.2,TrEMBL:B9H7J3,TrEMBL:B9S2U3,TrEMBL:F6H0I3;Derives_from=GSCOCT00031993001;Name=Cc10_g12740;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:NAD kinase 2%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:NADK2,CC_gene:Os11g0191400;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031993001~ NAD kinase 2%2C chloroplastic~ NADK2~ fragment;original_location=complement(join(2106832..2107098%2C2104573..2105671%2C2104530..2104555));owner=coffea | |
| 47986 chr10 manual_curation exon 22374059 22374195 . - . Parent=GSCOCT00031993001 | |
| 47987 chr10 manual_curation exon 22374213 22375311 . - . Parent=GSCOCT00031993001 | |
| 47988 chr10 manual_curation exon 22376472 22376949 . - . Parent=GSCOCT00031993001 | |
| 47989 chr10 manual_curation CDS 22374170 22374195 . - 1 Parent=GSCOCT00031993001 | |
| 47990 chr10 manual_curation CDS 22374213 22375311 . - 0 Parent=GSCOCT00031993001 | |
| 47991 chr10 manual_curation CDS 22376472 22376738 . - 0 Parent=GSCOCT00031993001 | |
| 47992 chr10 manual_curation gene 22386388 22388484 . + . ID=GSCOCG00031994001;Name=Cc10_g12750 | |
| 47993 chr10 manual_curation mRNA 22386388 22388484 . + . ID=GSCOCT00031994001;Parent=GSCOCG00031994001;Name=Cc10_g12750 | |
| 47994 chr10 manual_curation polypeptide 22386599 22388207 . + . ID=GSCOCP00031994001;Dbxref=GENE3D:G3DSA:3.40.1120.10,InterPro:IPR000439,InterPro:IPR012678,InterPro:IPR020925,PANTHER:PTHR11847,PFAM:PF00827,PROSITE:PS01194,SUPERFAMILY:SSF54189,SwissProt:O23515,SwissProt:P61314,SwissProt:Q5NVE0,SwissProt:Q8VYF1,SwissProt:Q8X034,TAIR:AT4G16720.1,TAIR:AT4G17390.1,TrEMBL:B4FMB3,TrEMBL:B4G0W2,TrEMBL:B6TP42,TrEMBL:F2DL85,TrEMBL:Q6L5M2;Derives_from=GSCOCT00031994001;Name=Cc10_g12750;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:60S ribosomal protein L15-1,CC_functional_completeness:complete,CC_gene:RPL15,CC_gene:SB61,CC_gene:SB62,CC_gene:RPL15A,CC_gene:RPL15B,CC_gene:rpl-15,CC_gene:Rpl15;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031994001~ 60S ribosomal protein L15-1~ RPL15~ complete;original_location=join(2116959..2117075%2C2117955..2118152%2C2118322..2118567);owner=coffea | |
| 47995 chr10 manual_curation exon 22386388 22386450 . + . Parent=GSCOCT00031994001 | |
| 47996 chr10 manual_curation exon 22386549 22386715 . + . Parent=GSCOCT00031994001 | |
| 47997 chr10 manual_curation exon 22387595 22387792 . + . Parent=GSCOCT00031994001 | |
| 47998 chr10 manual_curation exon 22387962 22388484 . + . Parent=GSCOCT00031994001 | |
| 47999 chr10 manual_curation CDS 22386599 22386715 . + 0 Parent=GSCOCT00031994001 | |
| 48000 chr10 manual_curation CDS 22387595 22387792 . + 0 Parent=GSCOCT00031994001 | |
| 48001 chr10 manual_curation CDS 22387962 22388207 . + 0 Parent=GSCOCT00031994001 | |
| 48002 chr10 manual_curation gene 22389662 22392365 . - . ID=GSCOCG00031995001;Name=Cc10_g12760 | |
| 48003 chr10 manual_curation mRNA 22389662 22392365 . - . ID=GSCOCT00031995001;Parent=GSCOCG00031995001;Name=Cc10_g12760 | |
| 48004 chr10 manual_curation polypeptide 22389662 22392365 . - . ID=GSCOCP00031995001;Dbxref=InterPro:IPR002100,InterPro:IPR002487,PFAM:PF00319,PFAM:PF01486,PRINTS:PR00404,PROFILE:PS50066,PROFILE:PS51297,PROSITE:PS00350,SMART:SM00432,SUPERFAMILY:SSF55455,SwissProt:Q6H711,SwissProt:Q8RVL4,SwissProt:Q9ATE5,TAIR:AT2G03710.1,TAIR:AT4G09960.3,TAIR:AT5G23260.2,TrEMBL:B9RIY4,TrEMBL:F6HIR2,TrEMBL:Q0JRW0;Derives_from=GSCOCT00031995001;Name=Cc10_g12760;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0005634,GO:0043565,CC_EC_number:missing_EC_number,PRODUCT:MADS-box protein defh21,CC_functional_completeness:complete,CC_gene:DEFH21,CC_gene:FBP24,CC_gene:MADS29;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031995001~ MADS-box protein defh21~ DEFH21~ complete;original_location=complement(join(2122538..2122725%2C2121317..2121398%2C2121058..2121222%2C2120814..2120855%2C2120644..2120685%2C2120022..2120321));owner=coffea | |
| 48005 chr10 manual_curation exon 22389662 22389961 . - . Parent=GSCOCT00031995001 | |
| 48006 chr10 manual_curation exon 22390284 22390325 . - . Parent=GSCOCT00031995001 | |
| 48007 chr10 manual_curation exon 22390454 22390495 . - . Parent=GSCOCT00031995001 | |
| 48008 chr10 manual_curation exon 22390698 22390862 . - . Parent=GSCOCT00031995001 | |
| 48009 chr10 manual_curation exon 22390957 22391038 . - . Parent=GSCOCT00031995001 | |
| 48010 chr10 manual_curation exon 22392178 22392365 . - . Parent=GSCOCT00031995001 | |
| 48011 chr10 manual_curation CDS 22389662 22389961 . - 0 Parent=GSCOCT00031995001 | |
| 48012 chr10 manual_curation CDS 22390284 22390325 . - 0 Parent=GSCOCT00031995001 | |
| 48013 chr10 manual_curation CDS 22390454 22390495 . - 0 Parent=GSCOCT00031995001 | |
| 48014 chr10 manual_curation CDS 22390698 22390862 . - 0 Parent=GSCOCT00031995001 | |
| 48015 chr10 manual_curation CDS 22390957 22391038 . - 2 Parent=GSCOCT00031995001 | |
| 48016 chr10 manual_curation CDS 22392178 22392365 . - 0 Parent=GSCOCT00031995001 | |
| 48017 chr10 manual_curation gene 22397072 22404493 . - . ID=GSCOCG00031997001;Name=Cc10_g12770 | |
| 48018 chr10 manual_curation mRNA 22397072 22404493 . - . ID=GSCOCT00031997001;Parent=GSCOCG00031997001;Name=Cc10_g12770 | |
| 48019 chr10 manual_curation polypeptide 22397072 22402968 . - . ID=GSCOCP00031997001;Dbxref=InterPro:IPR001202,PFAM:PF00397,PROFILE:PS50020,PROSITE:PS01159,SMART:SM00456,SUPERFAMILY:SSF51045,SwissProt:Q2HJC9,SwissProt:Q6PCT5,SwissProt:Q91VJ5,TAIR:AT2G41020.1,TrEMBL:D7TQ37,TrEMBL:I1NUN1,TrEMBL:Q5N816;Derives_from=GSCOCT00031997001;Name=Cc10_g12770;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:WW domain-containing protein,CC_functional_completeness:complete,CC_gene:PQBP1,CC_gene:Pqbp1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00031997001~ WW domain-containing protein~ PQBP1~ complete;original_location=complement(join(2133233..2133328%2C2133113..2133147%2C2132936..2133014%2C2132715..2132793%2C2131810..2131893%2C2131543..2131731%2C2131223..2131272%2C2130414..2130573%2C2130045..2130225%2C2129013..2129126%2C2128341..2128466%2C2128112..2128163%2C2127432..2127584));owner=coffea | |
| 48020 chr10 manual_curation exon 22404284 22404324 . - . Parent=GSCOCT00031997001 | |
| 48021 chr10 manual_curation exon 22404437 22404493 . - . Parent=GSCOCT00031997001 | |
| 48022 chr10 manual_curation exon 22397072 22397224 . - . Parent=GSCOCT00031997001 | |
| 48023 chr10 manual_curation exon 22397752 22397803 . - . Parent=GSCOCT00031997001 | |
| 48024 chr10 manual_curation exon 22397981 22398106 . - . Parent=GSCOCT00031997001 | |
| 48025 chr10 manual_curation exon 22398653 22398766 . - . Parent=GSCOCT00031997001 | |
| 48026 chr10 manual_curation exon 22399685 22399865 . - . Parent=GSCOCT00031997001 | |
| 48027 chr10 manual_curation exon 22400054 22400213 . - . Parent=GSCOCT00031997001 | |
| 48028 chr10 manual_curation exon 22400863 22400912 . - . Parent=GSCOCT00031997001 | |
| 48029 chr10 manual_curation exon 22401183 22401371 . - . Parent=GSCOCT00031997001 | |
| 48030 chr10 manual_curation exon 22401450 22401533 . - . Parent=GSCOCT00031997001 | |
| 48031 chr10 manual_curation exon 22402355 22402433 . - . Parent=GSCOCT00031997001 | |
| 48032 chr10 manual_curation exon 22402576 22402654 . - . Parent=GSCOCT00031997001 | |
| 48033 chr10 manual_curation exon 22402753 22402787 . - . Parent=GSCOCT00031997001 | |
| 48034 chr10 manual_curation exon 22402873 22402999 . - . Parent=GSCOCT00031997001 | |
| 48035 chr10 manual_curation CDS 22397072 22397224 . - 0 Parent=GSCOCT00031997001 | |
| 48036 chr10 manual_curation CDS 22397752 22397803 . - 2 Parent=GSCOCT00031997001 | |
| 48037 chr10 manual_curation CDS 22397981 22398106 . - 2 Parent=GSCOCT00031997001 | |
| 48038 chr10 manual_curation CDS 22398653 22398766 . - 2 Parent=GSCOCT00031997001 | |
| 48039 chr10 manual_curation CDS 22399685 22399865 . - 1 Parent=GSCOCT00031997001 | |
| 48040 chr10 manual_curation CDS 22400054 22400213 . - 0 Parent=GSCOCT00031997001 | |
| 48041 chr10 manual_curation CDS 22400863 22400912 . - 1 Parent=GSCOCT00031997001 | |
| 48042 chr10 manual_curation CDS 22401183 22401371 . - 1 Parent=GSCOCT00031997001 | |
| 48043 chr10 manual_curation CDS 22401450 22401533 . - 1 Parent=GSCOCT00031997001 | |
| 48044 chr10 manual_curation CDS 22402355 22402433 . - 0 Parent=GSCOCT00031997001 | |
| 48045 chr10 manual_curation CDS 22402576 22402654 . - 2 Parent=GSCOCT00031997001 | |
| 48046 chr10 manual_curation CDS 22402753 22402787 . - 0 Parent=GSCOCT00031997001 | |
| 48047 chr10 manual_curation CDS 22402873 22402968 . - 0 Parent=GSCOCT00031997001 | |
| 48048 chr10 manual_curation gene 22425780 22426704 . + . ID=GSCOCG00032000001;Name=Cc10_g12780 | |
| 48049 chr10 manual_curation mRNA 22425780 22426704 . + . ID=GSCOCT00032000001;Parent=GSCOCG00032000001;Name=Cc10_g12780 | |
| 48050 chr10 manual_curation polypeptide 22425780 22426118 . + . ID=GSCOCP00032000001;Derives_from=GSCOCT00032000001;Name=Cc10_g12780;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032000001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=2156140..2156478;owner=coffea | |
| 48051 chr10 manual_curation exon 22425780 22426704 . + . Parent=GSCOCT00032000001 | |
| 48052 chr10 manual_curation CDS 22425780 22426118 . + 0 Parent=GSCOCT00032000001 | |
| 48053 chr10 manual_curation gene 22450651 22453050 . + . ID=GSCOCG00032007001;Name=Cc10_g12790 | |
| 48054 chr10 manual_curation mRNA 22450651 22453050 . + . ID=GSCOCT00032007001;Parent=GSCOCG00032007001;Name=Cc10_g12790 | |
| 48055 chr10 manual_curation polypeptide 22450900 22453050 . + . ID=GSCOCP00032007001;Dbxref=InterPro:IPR000629,InterPro:IPR001650,InterPro:IPR011545,InterPro:IPR014001,InterPro:IPR014014,InterPro:IPR014021,PFAM:PF00270,PFAM:PF00271,PROFILE:PS51192,PROFILE:PS51194,PROFILE:PS51195,PROSITE:PS00039,SMART:SM00487,SMART:SM00490,SwissProt:P93008,SwissProt:Q53RK8,SwissProt:Q9FZ92,TAIR:AT1G28180.1,TAIR:AT2G33730.1,TAIR:AT3G58510.1,TrEMBL:A5BA90,TrEMBL:B9IED5,TrEMBL:D7LGD3,TrEMBL:F6I1B2,TrEMBL:G7KQ16,TrEMBL:G7ZZV1;Derives_from=GSCOCT00032007001;Name=Cc10_g12790;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0004386,GO:0005524,GO:0008026,CC_EC_number:missing_EC_number,PRODUCT:DEAD-box ATP-dependent RNA helicase 21,CC_functional_completeness:complete,CC_gene:RH21,CC_gene:Os03g0708600,CC_gene:RH44;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032007001~ DEAD-box ATP-dependent RNA helicase 21~ RH21~ complete;original_location=2181260..2183410;owner=coffea | |
| 48056 chr10 manual_curation exon 22450651 22453050 . + . Parent=GSCOCT00032007001 | |
| 48057 chr10 manual_curation CDS 22450900 22453050 . + 0 Parent=GSCOCT00032007001 | |
| 48058 chr10 manual_curation gene 22470568 22481833 . + . ID=GSCOCG00032009001;Name=Cc10_g12800 | |
| 48059 chr10 manual_curation mRNA 22470568 22481833 . + . ID=GSCOCT00032009001;Parent=GSCOCG00032009001;Name=Cc10_g12800 | |
| 48060 chr10 manual_curation polypeptide 22471002 22481463 . + . ID=GSCOCP00032009001;Dbxref=TAIR:AT1G21610.3,TAIR:AT1G77310.1,TrEMBL:B9H7J2,TrEMBL:E6NU79,TrEMBL:F6H0I1;Derives_from=GSCOCT00032009001;Name=Cc10_g12800;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative wound-responsive family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032009001~ Putative wound-responsive family protein~ unknown_gene~ complete;original_location=join(2201362..2201787%2C2201861..2201950%2C2202035..2202130%2C2202225..2202301%2C2202794..2203367%2C2206485..2206584%2C2206682..2206791%2C2206923..2207009%2C2208829..2208954%2C2209139..2209276%2C2209403..2209450%2C2209824..2209925%2C2211344..2211823);owner=coffea | |
| 48061 chr10 manual_curation exon 22470568 22471427 . + . Parent=GSCOCT00032009001 | |
| 48062 chr10 manual_curation exon 22471501 22471590 . + . Parent=GSCOCT00032009001 | |
| 48063 chr10 manual_curation exon 22471675 22471770 . + . Parent=GSCOCT00032009001 | |
| 48064 chr10 manual_curation exon 22471865 22471941 . + . Parent=GSCOCT00032009001 | |
| 48065 chr10 manual_curation exon 22472434 22473007 . + . Parent=GSCOCT00032009001 | |
| 48066 chr10 manual_curation exon 22476125 22476224 . + . Parent=GSCOCT00032009001 | |
| 48067 chr10 manual_curation exon 22476322 22476431 . + . Parent=GSCOCT00032009001 | |
| 48068 chr10 manual_curation exon 22476563 22476649 . + . Parent=GSCOCT00032009001 | |
| 48069 chr10 manual_curation exon 22478469 22478594 . + . Parent=GSCOCT00032009001 | |
| 48070 chr10 manual_curation exon 22478779 22478916 . + . Parent=GSCOCT00032009001 | |
| 48071 chr10 manual_curation exon 22479043 22479090 . + . Parent=GSCOCT00032009001 | |
| 48072 chr10 manual_curation exon 22479464 22479565 . + . Parent=GSCOCT00032009001 | |
| 48073 chr10 manual_curation exon 22480984 22481833 . + . Parent=GSCOCT00032009001 | |
| 48074 chr10 manual_curation CDS 22471002 22471427 . + 0 Parent=GSCOCT00032009001 | |
| 48075 chr10 manual_curation CDS 22471501 22471590 . + 0 Parent=GSCOCT00032009001 | |
| 48076 chr10 manual_curation CDS 22471675 22471770 . + 0 Parent=GSCOCT00032009001 | |
| 48077 chr10 manual_curation CDS 22471865 22471941 . + 0 Parent=GSCOCT00032009001 | |
| 48078 chr10 manual_curation CDS 22472434 22473007 . + 2 Parent=GSCOCT00032009001 | |
| 48079 chr10 manual_curation CDS 22476125 22476224 . + 0 Parent=GSCOCT00032009001 | |
| 48080 chr10 manual_curation CDS 22476322 22476431 . + 1 Parent=GSCOCT00032009001 | |
| 48081 chr10 manual_curation CDS 22476563 22476649 . + 0 Parent=GSCOCT00032009001 | |
| 48082 chr10 manual_curation CDS 22478469 22478594 . + 0 Parent=GSCOCT00032009001 | |
| 48083 chr10 manual_curation CDS 22478779 22478916 . + 0 Parent=GSCOCT00032009001 | |
| 48084 chr10 manual_curation CDS 22479043 22479090 . + 0 Parent=GSCOCT00032009001 | |
| 48085 chr10 manual_curation CDS 22479464 22479565 . + 0 Parent=GSCOCT00032009001 | |
| 48086 chr10 manual_curation CDS 22480984 22481463 . + 0 Parent=GSCOCT00032009001 | |
| 48087 chr10 manual_curation gene 22484274 22486720 . + . ID=GSCOCG00032010001;Name=Cc10_g12810 | |
| 48088 chr10 manual_curation mRNA 22484274 22486720 . + . ID=GSCOCT00032010001;Parent=GSCOCG00032010001;Name=Cc10_g12810 | |
| 48089 chr10 manual_curation polypeptide 22484364 22486280 . + . ID=GSCOCP00032010001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:P0C896,SwissProt:Q9SXD8,SwissProt:Q9T0D6,TAIR:AT1G62590.1,TAIR:AT3G02650.1,TAIR:AT4G11690.1,TIGRFAMs:TIGR00756,TrEMBL:A5BYI1,TrEMBL:B9GJX0,TrEMBL:B9RM09;Derives_from=GSCOCT00032010001;Name=Cc10_g12810;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Pentatricopeptide repeat-containing protein At3g02650%2C mitochondrial,CC_functional_completeness:complete,CC_gene:At3g02650,CC_gene:At4g11690,CC_gene:At1g62590;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032010001~ Putative Pentatricopeptide repeat-containing protein At3g02650%2C mitochondrial~ At3g02650~ complete;original_location=2214724..2216640;owner=coffea | |
| 48090 chr10 manual_curation exon 22484274 22486720 . + . Parent=GSCOCT00032010001 | |
| 48091 chr10 manual_curation CDS 22484364 22486280 . + 0 Parent=GSCOCT00032010001 | |
| 48092 chr10 manual_curation gene 22489802 22496113 . + . ID=GSCOCG00032011001;Name=Cc10_g12820 | |
| 48093 chr10 manual_curation mRNA 22489802 22496113 . + . ID=GSCOCT00032011001;Parent=GSCOCG00032011001;Name=Cc10_g12820 | |
| 48094 chr10 manual_curation polypeptide 22494879 22495368 . + . ID=GSCOCP00032011001;Dbxref=TrEMBL:B9GPK6,TrEMBL:B9R8W7,TrEMBL:F6I6Y3;Derives_from=GSCOCT00032011001;Name=Cc10_g12820;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032011001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(2225239..2225359%2C2225514..2225728);owner=coffea | |
| 48095 chr10 manual_curation exon 22489802 22490152 . + . Parent=GSCOCT00032011001 | |
| 48096 chr10 manual_curation exon 22490539 22490615 . + . Parent=GSCOCT00032011001 | |
| 48097 chr10 manual_curation exon 22493823 22494999 . + . Parent=GSCOCT00032011001 | |
| 48098 chr10 manual_curation exon 22495154 22496113 . + . Parent=GSCOCT00032011001 | |
| 48099 chr10 manual_curation CDS 22494879 22494999 . + 0 Parent=GSCOCT00032011001 | |
| 48100 chr10 manual_curation CDS 22495154 22495368 . + 1 Parent=GSCOCT00032011001 | |
| 48101 chr10 manual_curation gene 22497278 22500544 . - . ID=GSCOCG00032012001;Name=Cc10_g12830 | |
| 48102 chr10 manual_curation mRNA 22497278 22500544 . - . ID=GSCOCT00032012001;Parent=GSCOCG00032012001;Name=Cc10_g12830 | |
| 48103 chr10 manual_curation polypeptide 22497278 22500544 . - . ID=GSCOCP00032012001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:C0LGP4,SwissProt:C0LGT6,SwissProt:Q9SD62,TAIR:AT3G47090.1,TAIR:AT3G47570.1,TAIR:AT3G47580.1,TrEMBL:B9I0G8,TrEMBL:B9IL48,TrEMBL:F6HKT0;Derives_from=GSCOCT00032012001;Name=Cc10_g12830;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570,CC_functional_completeness:complete,CC_gene:At3g47570,CC_gene:EFR,CC_gene:At3g47110;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032012001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570~ At3g47570~ complete;original_location=complement(join(2228183..2230904%2C2227638..2228032));owner=coffea | |
| 48104 chr10 manual_curation exon 22497278 22497672 . - . Parent=GSCOCT00032012001 | |
| 48105 chr10 manual_curation exon 22497823 22500544 . - . Parent=GSCOCT00032012001 | |
| 48106 chr10 manual_curation CDS 22497278 22497672 . - 1 Parent=GSCOCT00032012001 | |
| 48107 chr10 manual_curation CDS 22497823 22500544 . - 0 Parent=GSCOCT00032012001 | |
| 48108 chr10 manual_curation gene 22519006 22520275 . - . ID=GSCOCG00035378001;Name=Cc10_g12840 | |
| 48109 chr10 manual_curation mRNA 22519006 22520275 . - . ID=GSCOCT00035378001;Parent=GSCOCG00035378001;Name=Cc10_g12840 | |
| 48110 chr10 manual_curation polypeptide 22519892 22520275 . - . ID=GSCOCP00035378001;Derives_from=GSCOCT00035378001;Name=Cc10_g12840;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035378001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1963079..1963462;owner=coffea | |
| 48111 chr10 manual_curation exon 22519006 22520275 . - . Parent=GSCOCT00035378001 | |
| 48112 chr10 manual_curation CDS 22519892 22520275 . - 0 Parent=GSCOCT00035378001 | |
| 48113 chr10 manual_curation gene 22540892 22542865 . - . ID=GSCOCG00035377001;Name=Cc10_g12850 | |
| 48114 chr10 manual_curation mRNA 22540892 22542865 . - . ID=GSCOCT00035377001;Parent=GSCOCG00035377001;Name=Cc10_g12850 | |
| 48115 chr10 manual_curation polypeptide 22540892 22542691 . - . ID=GSCOCP00035377001;Dbxref=GENE3D:G3DSA:1.10.620.20,InterPro:IPR005067,InterPro:IPR009078,InterPro:IPR012348,PFAM:PF03405,PIR:PIRSF000346,SUPERFAMILY:SSF47240,SwissProt:B8A7A3,SwissProt:Q84VY3,SwissProt:Q8LJJ9,TAIR:AT1G43800.1,TAIR:AT3G02630.1,TAIR:AT5G16230.1,TrEMBL:B5AY36,TrEMBL:B9H7N5,TrEMBL:F6H099;Derives_from=GSCOCT00035377001;Name=Cc10_g12850;Ontology_term=CC_evidence_code:ISS,GO:0006631,GO:0016491,GO:0045300,GO:0046914,GO:0055114,CC_EC_number:1.14.19.2,CC_EC_number:1.14.19.2,PRODUCT:Acyl-[acyl-carrier-protein] desaturase 6%2C chloroplastic,CC_functional_completeness:complete,CC_gene:S-ACP-DES6,CC_gene:Os01g0880800,CC_gene:OsI_04666;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035377001~ Acyl-[acyl-carrier-protein] desaturase 6%2C chloroplastic~ S-ACP-DES6~ complete;original_location=join(1940663..1941109%2C1941896..1942462);owner=coffea | |
| 48116 chr10 manual_curation exon 22542245 22542865 . - . Parent=GSCOCT00035377001 | |
| 48117 chr10 manual_curation exon 22540892 22541458 . - . Parent=GSCOCT00035377001 | |
| 48118 chr10 manual_curation CDS 22542245 22542691 . - 0 Parent=GSCOCT00035377001 | |
| 48119 chr10 manual_curation CDS 22540892 22541458 . - 0 Parent=GSCOCT00035377001 | |
| 48120 chr10 manual_curation gene 22548901 22552919 . + . ID=GSCOCG00035376001;Name=Cc10_g12860 | |
| 48121 chr10 manual_curation mRNA 22548901 22552919 . + . ID=GSCOCT00035376001;Parent=GSCOCG00035376001;Name=Cc10_g12860 | |
| 48122 chr10 manual_curation polypeptide 22549006 22552767 . + . ID=GSCOCP00035376001;Dbxref=InterPro:IPR003728,PFAM:PF02576,TAIR:AT1G69210.1,TAIR:AT1G77122.1,TrEMBL:B9GTM4,TrEMBL:B9SJI9,TrEMBL:E0CQP0;Derives_from=GSCOCT00035376001;Name=Cc10_g12860;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035376001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=complement(join(1934048..1934348%2C1931894..1931952%2C1931571..1931746%2C1931041..1931149%2C1930587..1930895));owner=coffea | |
| 48123 chr10 manual_curation exon 22552459 22552919 . + . Parent=GSCOCT00035376001 | |
| 48124 chr10 manual_curation exon 22552205 22552313 . + . Parent=GSCOCT00035376001 | |
| 48125 chr10 manual_curation exon 22551608 22551783 . + . Parent=GSCOCT00035376001 | |
| 48126 chr10 manual_curation exon 22551402 22551460 . + . Parent=GSCOCT00035376001 | |
| 48127 chr10 manual_curation exon 22548901 22549306 . + . Parent=GSCOCT00035376001 | |
| 48128 chr10 manual_curation CDS 22552459 22552767 . + 0 Parent=GSCOCT00035376001 | |
| 48129 chr10 manual_curation CDS 22552205 22552313 . + 2 Parent=GSCOCT00035376001 | |
| 48130 chr10 manual_curation CDS 22551608 22551783 . + 0 Parent=GSCOCT00035376001 | |
| 48131 chr10 manual_curation CDS 22551402 22551460 . + 1 Parent=GSCOCT00035376001 | |
| 48132 chr10 manual_curation CDS 22549006 22549306 . + 0 Parent=GSCOCT00035376001 | |
| 48133 chr10 manual_curation gene 22564378 22569138 . + . ID=GSCOCG00035375001;Name=Cc10_g12870 | |
| 48134 chr10 manual_curation mRNA 22564378 22569138 . + . ID=GSCOCT00035375001;Parent=GSCOCG00035375001;Name=Cc10_g12870 | |
| 48135 chr10 manual_curation polypeptide 22564793 22569138 . + . ID=GSCOCP00035375001;Dbxref=InterPro:IPR001563,InterPro:IPR018202,PANTHER:PTHR11802,PFAM:PF00450,PRINTS:PR00724,PROSITE:PS00131,SwissProt:Q9FH05,SwissProt:Q9FH06,SwissProt:Q9MAR8,TAIR:AT1G43780.1,TAIR:AT5G42230.1,TAIR:AT5G42240.1,TrEMBL:B9GTM5,TrEMBL:I1JYX4,TrEMBL:I1MAF1;Derives_from=GSCOCT00035375001;Name=Cc10_g12870;Ontology_term=CC_evidence_code:ISS,GO:0004185,GO:0006508,CC_EC_number:3.4.16.6,PRODUCT:Serine carboxypeptidase-like 42,CC_functional_completeness:complete,CC_gene:SCPL42,CC_gene:SCPL44,CC_gene:SCPL41;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035375001~ Serine carboxypeptidase-like 42~ SCPL42~ complete;original_location=complement(join(1918321..1918561%2C1917390..1917497%2C1917177..1917269%2C1916934..1917026%2C1916104..1916189%2C1915681..1915959%2C1915464..1915597%2C1914680..1914772%2C1914471..1914588%2C1914216..1914383));owner=coffea | |
| 48136 chr10 manual_curation exon 22564378 22564491 . + . Parent=GSCOCT00035375001 | |
| 48137 chr10 manual_curation exon 22568971 22569138 . + . Parent=GSCOCT00035375001 | |
| 48138 chr10 manual_curation exon 22568766 22568883 . + . Parent=GSCOCT00035375001 | |
| 48139 chr10 manual_curation exon 22568582 22568674 . + . Parent=GSCOCT00035375001 | |
| 48140 chr10 manual_curation exon 22567757 22567890 . + . Parent=GSCOCT00035375001 | |
| 48141 chr10 manual_curation exon 22567395 22567673 . + . Parent=GSCOCT00035375001 | |
| 48142 chr10 manual_curation exon 22567165 22567250 . + . Parent=GSCOCT00035375001 | |
| 48143 chr10 manual_curation exon 22566328 22566420 . + . Parent=GSCOCT00035375001 | |
| 48144 chr10 manual_curation exon 22566085 22566177 . + . Parent=GSCOCT00035375001 | |
| 48145 chr10 manual_curation exon 22565857 22565964 . + . Parent=GSCOCT00035375001 | |
| 48146 chr10 manual_curation exon 22564685 22565033 . + . Parent=GSCOCT00035375001 | |
| 48147 chr10 manual_curation CDS 22568971 22569138 . + 0 Parent=GSCOCT00035375001 | |
| 48148 chr10 manual_curation CDS 22568766 22568883 . + 2 Parent=GSCOCT00035375001 | |
| 48149 chr10 manual_curation CDS 22568582 22568674 . + 2 Parent=GSCOCT00035375001 | |
| 48150 chr10 manual_curation CDS 22567757 22567890 . + 0 Parent=GSCOCT00035375001 | |
| 48151 chr10 manual_curation CDS 22567395 22567673 . + 0 Parent=GSCOCT00035375001 | |
| 48152 chr10 manual_curation CDS 22567165 22567250 . + 1 Parent=GSCOCT00035375001 | |
| 48153 chr10 manual_curation CDS 22566328 22566420 . + 1 Parent=GSCOCT00035375001 | |
| 48154 chr10 manual_curation CDS 22566085 22566177 . + 1 Parent=GSCOCT00035375001 | |
| 48155 chr10 manual_curation CDS 22565857 22565964 . + 1 Parent=GSCOCT00035375001 | |
| 48156 chr10 manual_curation CDS 22564793 22565033 . + 0 Parent=GSCOCT00035375001 | |
| 48157 chr10 manual_curation gene 22598553 22599299 . + . ID=GSCOCG00035372001;Name=Cc10_g12880 | |
| 48158 chr10 manual_curation mRNA 22598553 22599299 . + . ID=GSCOCT00035372001;Parent=GSCOCG00035372001;Name=Cc10_g12880 | |
| 48159 chr10 manual_curation polypeptide 22598651 22599058 . + . ID=GSCOCP00035372001;Derives_from=GSCOCT00035372001;Name=Cc10_g12880;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035372001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1884507..1884703%2C1884296..1884338));owner=coffea | |
| 48160 chr10 manual_curation exon 22599016 22599299 . + . Parent=GSCOCT00035372001 | |
| 48161 chr10 manual_curation exon 22598553 22598847 . + . Parent=GSCOCT00035372001 | |
| 48162 chr10 manual_curation CDS 22599016 22599058 . + 2 Parent=GSCOCT00035372001 | |
| 48163 chr10 manual_curation CDS 22598651 22598847 . + 0 Parent=GSCOCT00035372001 | |
| 48164 chr10 manual_curation gene 22626981 22630079 . + . ID=GSCOCG00035370001;Name=Cc10_g12890 | |
| 48165 chr10 manual_curation mRNA 22626981 22630079 . + . ID=GSCOCT00035370001;Parent=GSCOCG00035370001;Name=Cc10_g12890 | |
| 48166 chr10 manual_curation polypeptide 22626981 22630079 . + . ID=GSCOCP00035370001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q9FWA6,SwissProt:Q9SS83,SwissProt:Q9SVP7,TAIR:AT3G02330.1,TAIR:AT3G09040.1,TAIR:AT4G13650.1,TIGRFAMs:TIGR00756,TrEMBL:B9H7N6,TrEMBL:D7L7Q9,TrEMBL:E0CQN7;Derives_from=GSCOCT00035370001;Name=Cc10_g12890;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At3g09040%2C mitochondrial,CC_functional_completeness:complete,CC_gene:PCMP-E88,CC_gene:PCMP-E90,CC_gene:PCMP-H42;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035370001~ Pentatricopeptide repeat-containing protein At3g09040%2C mitochondrial~ PCMP-E88~ complete;original_location=complement(1853275..1856373);owner=coffea | |
| 48167 chr10 manual_curation exon 22626981 22630079 . + . Parent=GSCOCT00035370001 | |
| 48168 chr10 manual_curation CDS 22626981 22630079 . + 0 Parent=GSCOCT00035370001 | |
| 48169 chr10 manual_curation gene 22637594 22641412 . - . ID=GSCOCG00035369001;Name=Cc10_g12900 | |
| 48170 chr10 manual_curation mRNA 22637594 22641412 . - . ID=GSCOCT00035369001;Parent=GSCOCG00035369001;Name=Cc10_g12900 | |
| 48171 chr10 manual_curation polypeptide 22637594 22641412 . - . ID=GSCOCP00035369001;Dbxref=InterPro:IPR000620,PFAM:PF00892,SwissProt:Q6J163,TAIR:AT1G43650.1,TAIR:AT5G07050.1,TAIR:AT5G64700.1,TrEMBL:A5AS30,TrEMBL:B9GTI9,TrEMBL:B9H7S2;Derives_from=GSCOCT00035369001;Name=Cc10_g12900;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative Auxin-induced protein 5NG4,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035369001~ Putative Auxin-induced protein 5NG4~ unknown_gene~ fragment;original_location=join(1841942..1842216%2C1842339..1842401%2C1842526..1842642%2C1842734..1842968%2C1843082..1843240%2C1845575..1845760);owner=coffea | |
| 48172 chr10 manual_curation exon 22641138 22641412 . - . Parent=GSCOCT00035369001 | |
| 48173 chr10 manual_curation exon 22640953 22641015 . - . Parent=GSCOCT00035369001 | |
| 48174 chr10 manual_curation exon 22640712 22640828 . - . Parent=GSCOCT00035369001 | |
| 48175 chr10 manual_curation exon 22640386 22640620 . - . Parent=GSCOCT00035369001 | |
| 48176 chr10 manual_curation exon 22640114 22640272 . - . Parent=GSCOCT00035369001 | |
| 48177 chr10 manual_curation exon 22637594 22637779 . - . Parent=GSCOCT00035369001 | |
| 48178 chr10 manual_curation CDS 22641138 22641412 . - 0 Parent=GSCOCT00035369001 | |
| 48179 chr10 manual_curation CDS 22640953 22641015 . - 2 Parent=GSCOCT00035369001 | |
| 48180 chr10 manual_curation CDS 22640712 22640828 . - 2 Parent=GSCOCT00035369001 | |
| 48181 chr10 manual_curation CDS 22640386 22640620 . - 2 Parent=GSCOCT00035369001 | |
| 48182 chr10 manual_curation CDS 22640114 22640272 . - 0 Parent=GSCOCT00035369001 | |
| 48183 chr10 manual_curation CDS 22637594 22637779 . - 0 Parent=GSCOCT00035369001 | |
| 48184 chr10 manual_curation gene 22643865 22647562 . + . ID=GSCOCG00035368001;Name=Cc10_g12910 | |
| 48185 chr10 manual_curation mRNA 22643865 22647562 . + . ID=GSCOCT00035368001;Parent=GSCOCG00035368001;Name=Cc10_g12910 | |
| 48186 chr10 manual_curation polypeptide 22644316 22647199 . + . ID=GSCOCP00035368001;Dbxref=InterPro:IPR004253,PFAM:PF03005,TAIR:AT1G48880.1,TAIR:AT3G06080.2,TAIR:AT3G62390.1,TrEMBL:A9PDE1,TrEMBL:E0CQN6,TrEMBL:G7J655;Derives_from=GSCOCT00035368001;Name=Cc10_g12910;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:TRICHOME BIREFRINGENCE-LIKE 7,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035368001~ TRICHOME BIREFRINGENCE-LIKE 7~ unknown_gene~ complete;original_location=complement(join(1838170..1839038%2C1836830..1836988%2C1836155..1836425));owner=coffea | |
| 48187 chr10 manual_curation exon 22646929 22647562 . + . Parent=GSCOCT00035368001 | |
| 48188 chr10 manual_curation exon 22646366 22646524 . + . Parent=GSCOCT00035368001 | |
| 48189 chr10 manual_curation exon 22643865 22645184 . + . Parent=GSCOCT00035368001 | |
| 48190 chr10 manual_curation CDS 22646929 22647199 . + 2 Parent=GSCOCT00035368001 | |
| 48191 chr10 manual_curation CDS 22646366 22646524 . + 2 Parent=GSCOCT00035368001 | |
| 48192 chr10 manual_curation CDS 22644316 22645184 . + 0 Parent=GSCOCT00035368001 | |
| 48193 chr10 manual_curation gene 22650862 22657849 . + . ID=GSCOCG00035366001;Name=Cc10_g12920 | |
| 48194 chr10 manual_curation mRNA 22650862 22657849 . + . ID=GSCOCT00035366001;Parent=GSCOCG00035366001;Name=Cc10_g12920 | |
| 48195 chr10 manual_curation polypeptide 22652549 22657511 . + . ID=GSCOCP00035366001;Dbxref=SwissProt:Q7XTQ5,SwissProt:Q9LF50,TAIR:AT5G17520.1,TAIR:AT5G17523.1,TrEMBL:D7T7F2,TrEMBL:E4MXH2,TrEMBL:I1LP25;Derives_from=GSCOCT00035366001;Name=Cc10_g12920;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Maltose excess protein 1%2C chloroplastic,CC_functional_completeness:complete,CC_gene:MEX1,CC_gene:Os04g0602400;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035366001~ Maltose excess protein 1%2C chloroplastic~ MEX1~ complete;original_location=complement(join(1830560..1830805%2C1830216..1830389%2C1829829..1830119%2C1829652..1829741%2C1828267..1828368%2C1828035..1828153%2C1826294..1826356%2C1826156..1826217%2C1825843..1825925));owner=coffea | |
| 48196 chr10 manual_curation exon 22650862 22651149 . + . Parent=GSCOCT00035366001 | |
| 48197 chr10 manual_curation exon 22657429 22657849 . + . Parent=GSCOCT00035366001 | |
| 48198 chr10 manual_curation exon 22657137 22657198 . + . Parent=GSCOCT00035366001 | |
| 48199 chr10 manual_curation exon 22656998 22657060 . + . Parent=GSCOCT00035366001 | |
| 48200 chr10 manual_curation exon 22655201 22655319 . + . Parent=GSCOCT00035366001 | |
| 48201 chr10 manual_curation exon 22654986 22655087 . + . Parent=GSCOCT00035366001 | |
| 48202 chr10 manual_curation exon 22653613 22653702 . + . Parent=GSCOCT00035366001 | |
| 48203 chr10 manual_curation exon 22653235 22653525 . + . Parent=GSCOCT00035366001 | |
| 48204 chr10 manual_curation exon 22652965 22653138 . + . Parent=GSCOCT00035366001 | |
| 48205 chr10 manual_curation exon 22652450 22652794 . + . Parent=GSCOCT00035366001 | |
| 48206 chr10 manual_curation CDS 22657429 22657511 . + 1 Parent=GSCOCT00035366001 | |
| 48207 chr10 manual_curation CDS 22657137 22657198 . + 2 Parent=GSCOCT00035366001 | |
| 48208 chr10 manual_curation CDS 22656998 22657060 . + 2 Parent=GSCOCT00035366001 | |
| 48209 chr10 manual_curation CDS 22655201 22655319 . + 0 Parent=GSCOCT00035366001 | |
| 48210 chr10 manual_curation CDS 22654986 22655087 . + 0 Parent=GSCOCT00035366001 | |
| 48211 chr10 manual_curation CDS 22653613 22653702 . + 0 Parent=GSCOCT00035366001 | |
| 48212 chr10 manual_curation CDS 22653235 22653525 . + 0 Parent=GSCOCT00035366001 | |
| 48213 chr10 manual_curation CDS 22652965 22653138 . + 0 Parent=GSCOCT00035366001 | |
| 48214 chr10 manual_curation CDS 22652549 22652794 . + 0 Parent=GSCOCT00035366001 | |
| 48215 chr10 manual_curation gene 22659337 22660083 . - . ID=GSCOCG00035363001;Name=Cc10_g12930 | |
| 48216 chr10 manual_curation mRNA 22659337 22660083 . - . ID=GSCOCT00035363001;Parent=GSCOCG00035363001;Name=Cc10_g12930 | |
| 48217 chr10 manual_curation polypeptide 22659494 22660083 . - . ID=GSCOCP00035363001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR002085,InterPro:IPR011032,InterPro:IPR013149,InterPro:IPR016040,PANTHER:PTHR11695,PFAM:PF00107,SUPERFAMILY:SSF50129,SwissProt:P06525,SwissProt:P13603,TAIR:AT1G77120.1,TAIR:AT5G24760.1,TAIR:AT5G43940.2,TrEMBL:D7U4F6,TrEMBL:F6I0F6,TrEMBL:Q9M6B4;Derives_from=GSCOCT00035363001;Name=Cc10_g12930;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,GO:0008270,GO:0016491,GO:0055114,CC_EC_number:1.1.1.284,PRODUCT:Alcohol dehydrogenase class-P,CC_functional_completeness:fragment,CC_gene:ADH1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035363001~ Alcohol dehydrogenase class-P~ ADH1~ fragment;original_location=join(1823271..1823354%2C1823447..1823608%2C1823744..1823860);owner=coffea | |
| 48218 chr10 manual_curation exon 22660000 22660083 . - . Parent=GSCOCT00035363001 | |
| 48219 chr10 manual_curation exon 22659746 22659907 . - . Parent=GSCOCT00035363001 | |
| 48220 chr10 manual_curation exon 22659337 22659610 . - . Parent=GSCOCT00035363001 | |
| 48221 chr10 manual_curation CDS 22660000 22660083 . - 0 Parent=GSCOCT00035363001 | |
| 48222 chr10 manual_curation CDS 22659746 22659907 . - 0 Parent=GSCOCT00035363001 | |
| 48223 chr10 manual_curation CDS 22659494 22659610 . - 0 Parent=GSCOCT00035363001 | |
| 48224 chr10 manual_curation gene 22660212 22662616 . - . ID=GSCOCG00035362001;Name=Cc10_g12940 | |
| 48225 chr10 manual_curation mRNA 22660212 22662616 . - . ID=GSCOCT00035362001;Parent=GSCOCG00035362001;Name=Cc10_g12940 | |
| 48226 chr10 manual_curation polypeptide 22660212 22662558 . - . ID=GSCOCP00035362001;Dbxref=InterPro:IPR002085,InterPro:IPR002328,InterPro:IPR011032,InterPro:IPR013149,InterPro:IPR013154,PANTHER:PTHR11695,PFAM:PF00107,PFAM:PF08240,PROSITE:PS00059,SUPERFAMILY:SSF50129,SwissProt:P14674,SwissProt:P28032,TAIR:AT1G64710.1,TAIR:AT1G77120.1,TAIR:AT5G43940.2,TrEMBL:B9HEP6,TrEMBL:B9MZ79,TrEMBL:Q9M6B5;Derives_from=GSCOCT00035362001;Name=Cc10_g12940;Ontology_term=CC_evidence_code:ISS,GO:0008270,GO:0016491,GO:0055114,CC_EC_number:1.1.1.284,PRODUCT:Alcohol dehydrogenase 2,CC_functional_completeness:fragment,CC_gene:ADH1,CC_gene:ADH2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035362001~ Alcohol dehydrogenase 2~ ADH1~ fragment;original_location=join(1820796..1820832%2C1820987..1821123%2C1821665..1821711%2C1822338..1822663%2C1822746..1822828%2C1822920..1822995%2C1823072..1823142);owner=coffea | |
| 48227 chr10 manual_curation exon 22662522 22662616 . - . Parent=GSCOCT00035362001 | |
| 48228 chr10 manual_curation exon 22662231 22662367 . - . Parent=GSCOCT00035362001 | |
| 48229 chr10 manual_curation exon 22661643 22661689 . - . Parent=GSCOCT00035362001 | |
| 48230 chr10 manual_curation exon 22660691 22661016 . - . Parent=GSCOCT00035362001 | |
| 48231 chr10 manual_curation exon 22660526 22660608 . - . Parent=GSCOCT00035362001 | |
| 48232 chr10 manual_curation exon 22660359 22660434 . - . Parent=GSCOCT00035362001 | |
| 48233 chr10 manual_curation exon 22660212 22660282 . - . Parent=GSCOCT00035362001 | |
| 48234 chr10 manual_curation CDS 22662522 22662558 . - 0 Parent=GSCOCT00035362001 | |
| 48235 chr10 manual_curation CDS 22662231 22662367 . - 1 Parent=GSCOCT00035362001 | |
| 48236 chr10 manual_curation CDS 22661643 22661689 . - 0 Parent=GSCOCT00035362001 | |
| 48237 chr10 manual_curation CDS 22660691 22661016 . - 2 Parent=GSCOCT00035362001 | |
| 48238 chr10 manual_curation CDS 22660526 22660608 . - 1 Parent=GSCOCT00035362001 | |
| 48239 chr10 manual_curation CDS 22660359 22660434 . - 0 Parent=GSCOCT00035362001 | |
| 48240 chr10 manual_curation CDS 22660212 22660282 . - 1 Parent=GSCOCT00035362001 | |
| 48241 chr10 manual_curation gene 22666072 22671714 . - . ID=GSCOCG00035361001;Name=Cc10_g12950 | |
| 48242 chr10 manual_curation mRNA 22666072 22671714 . - . ID=GSCOCT00035361001;Parent=GSCOCG00035361001;Name=Cc10_g12950 | |
| 48243 chr10 manual_curation polypeptide 22666072 22671714 . - . ID=GSCOCP00035361001;Dbxref=InterPro:IPR004776,InterPro:IPR014024,PFAM:PF03547,SwissProt:Q5SMQ9,SwissProt:Q67UL3,SwissProt:Q9SQH6,TAIR:AT1G23080.1,TAIR:AT1G77110.1,TAIR:AT2G01420.2,TIGRFAMs:TIGR00946,TrEMBL:B9H7N4,TrEMBL:E5KGD8,TrEMBL:F6H096;Derives_from=GSCOCT00035361001;Name=Cc10_g12950;Ontology_term=CC_evidence_code:ISS,GO:0016021,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Probable auxin efflux carrier component 6,CC_functional_completeness:complete,CC_gene:PIN6,CC_gene:PIN1,CC_gene:PIN1C;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035361001~ Probable auxin efflux carrier component 6~ PIN6~ complete;original_location=join(1811640..1812064%2C1812516..1813147%2C1815599..1815788%2C1816211..1816296%2C1816544..1816701%2C1816813..1816889%2C1817216..1817282);owner=coffea | |
| 48244 chr10 manual_curation exon 22671290 22671714 . - . Parent=GSCOCT00035361001 | |
| 48245 chr10 manual_curation exon 22670207 22670838 . - . Parent=GSCOCT00035361001 | |
| 48246 chr10 manual_curation exon 22667566 22667755 . - . Parent=GSCOCT00035361001 | |
| 48247 chr10 manual_curation exon 22667058 22667143 . - . Parent=GSCOCT00035361001 | |
| 48248 chr10 manual_curation exon 22666653 22666810 . - . Parent=GSCOCT00035361001 | |
| 48249 chr10 manual_curation exon 22666465 22666541 . - . Parent=GSCOCT00035361001 | |
| 48250 chr10 manual_curation exon 22666072 22666138 . - . Parent=GSCOCT00035361001 | |
| 48251 chr10 manual_curation CDS 22671290 22671714 . - 0 Parent=GSCOCT00035361001 | |
| 48252 chr10 manual_curation CDS 22670207 22670838 . - 2 Parent=GSCOCT00035361001 | |
| 48253 chr10 manual_curation CDS 22667566 22667755 . - 1 Parent=GSCOCT00035361001 | |
| 48254 chr10 manual_curation CDS 22667058 22667143 . - 2 Parent=GSCOCT00035361001 | |
| 48255 chr10 manual_curation CDS 22666653 22666810 . - 1 Parent=GSCOCT00035361001 | |
| 48256 chr10 manual_curation CDS 22666465 22666541 . - 0 Parent=GSCOCT00035361001 | |
| 48257 chr10 manual_curation CDS 22666072 22666138 . - 2 Parent=GSCOCT00035361001 | |
| 48258 chr10 manual_curation gene 22677141 22680050 . + . ID=GSCOCG00035360001;Name=Cc10_g12960 | |
| 48259 chr10 manual_curation mRNA 22677141 22680050 . + . ID=GSCOCT00035360001;Parent=GSCOCG00035360001;Name=Cc10_g12960 | |
| 48260 chr10 manual_curation polypeptide 22677309 22679721 . + . ID=GSCOCP00035360001;Dbxref=InterPro:IPR002085,InterPro:IPR002328,InterPro:IPR011032,InterPro:IPR013149,InterPro:IPR013154,PANTHER:PTHR11695,PFAM:PF00107,PFAM:PF08240,PROSITE:PS00059,SUPERFAMILY:SSF50129,SwissProt:P14673,SwissProt:P14674,SwissProt:P14675,TAIR:AT1G77120.1,TAIR:AT5G24760.1,TAIR:AT5G43940.2,TrEMBL:B9HEP6,TrEMBL:B9T7D8,TrEMBL:Q40249;Derives_from=GSCOCT00035360001;Name=Cc10_g12960;Ontology_term=CC_evidence_code:ISS,GO:0008270,GO:0016491,GO:0055114,CC_EC_number:1.1.1.284,PRODUCT:Alcohol dehydrogenase 2,CC_functional_completeness:complete,CC_gene:ADH2,CC_gene:ADH3,CC_gene:ADH1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035360001~ Alcohol dehydrogenase 2~ ADH2~ complete;original_location=complement(join(1806009..1806045%2C1805628..1805764%2C1805445..1805491%2C1805006..1805331%2C1804820..1804902%2C1804652..1804727%2C1804406..1804467%2C1804211..1804306%2C1803857..1804018%2C1803633..1803749));owner=coffea | |
| 48261 chr10 manual_curation exon 22679605 22680050 . + . Parent=GSCOCT00035360001 | |
| 48262 chr10 manual_curation exon 22679336 22679497 . + . Parent=GSCOCT00035360001 | |
| 48263 chr10 manual_curation exon 22679048 22679143 . + . Parent=GSCOCT00035360001 | |
| 48264 chr10 manual_curation exon 22678887 22678948 . + . Parent=GSCOCT00035360001 | |
| 48265 chr10 manual_curation exon 22678627 22678702 . + . Parent=GSCOCT00035360001 | |
| 48266 chr10 manual_curation exon 22678452 22678534 . + . Parent=GSCOCT00035360001 | |
| 48267 chr10 manual_curation exon 22678023 22678348 . + . Parent=GSCOCT00035360001 | |
| 48268 chr10 manual_curation exon 22677863 22677909 . + . Parent=GSCOCT00035360001 | |
| 48269 chr10 manual_curation exon 22677590 22677726 . + . Parent=GSCOCT00035360001 | |
| 48270 chr10 manual_curation exon 22677141 22677345 . + . Parent=GSCOCT00035360001 | |
| 48271 chr10 manual_curation CDS 22679605 22679721 . + 0 Parent=GSCOCT00035360001 | |
| 48272 chr10 manual_curation CDS 22679336 22679497 . + 0 Parent=GSCOCT00035360001 | |
| 48273 chr10 manual_curation CDS 22679048 22679143 . + 0 Parent=GSCOCT00035360001 | |
| 48274 chr10 manual_curation CDS 22678887 22678948 . + 1 Parent=GSCOCT00035360001 | |
| 48275 chr10 manual_curation CDS 22678627 22678702 . + 0 Parent=GSCOCT00035360001 | |
| 48276 chr10 manual_curation CDS 22678452 22678534 . + 1 Parent=GSCOCT00035360001 | |
| 48277 chr10 manual_curation CDS 22678023 22678348 . + 2 Parent=GSCOCT00035360001 | |
| 48278 chr10 manual_curation CDS 22677863 22677909 . + 0 Parent=GSCOCT00035360001 | |
| 48279 chr10 manual_curation CDS 22677590 22677726 . + 1 Parent=GSCOCT00035360001 | |
| 48280 chr10 manual_curation CDS 22677309 22677345 . + 0 Parent=GSCOCT00035360001 | |
| 48281 chr10 manual_curation gene 22682367 22694020 . - . ID=GSCOCG00035359001;Name=Cc10_g12970 | |
| 48282 chr10 manual_curation mRNA 22682367 22694020 . - . ID=GSCOCT00035359001;Parent=GSCOCG00035359001;Name=Cc10_g12970 | |
| 48283 chr10 manual_curation polypeptide 22682704 22693839 . - . ID=GSCOCP00035359001;Dbxref=InterPro:IPR005100,InterPro:IPR005824,InterPro:IPR005825,InterPro:IPR006645,InterPro:IPR008991,InterPro:IPR017071,InterPro:IPR022581,PFAM:PF03439,PFAM:PF11942,PIR:PIRSF036945,PROSITE:PS01108,SMART:SM00738,SMART:SM00739,SUPERFAMILY:SSF50104,SwissProt:O80770,SwissProt:Q5ZI08,SwissProt:Q9STN3,TAIR:AT2G34210.1,TAIR:AT4G08350.1,TAIR:AT5G04290.1,TrEMBL:B9HRF8,TrEMBL:B9SJK4,TrEMBL:E0CQN1;Derives_from=GSCOCT00035359001;Name=Cc10_g12970;Ontology_term=CC_evidence_code:ISS,GO:0003711,GO:0003735,GO:0005622,GO:0005840,GO:0006357,GO:0006412,GO:0032968,CC_EC_number:missing_EC_number,PRODUCT:Putative transcription elongation factor SPT5 homolog 1,CC_functional_completeness:complete,CC_gene:At4g08350,CC_gene:At2g34210,CC_gene:SUPT5H;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035359001~ Putative transcription elongation factor SPT5 homolog 1~ At4g08350~ complete;original_location=join(1789515..1789827%2C1792736..1792974%2C1793058..1793204%2C1793354..1793515%2C1793613..1793696%2C1793880..1793956%2C1794051..1794408%2C1794510..1794665%2C1794747..1794844%2C1794913..1794961%2C1795032..1795187%2C1795271..1795414%2C1795503..1795599%2C1795882..1796046%2C1796162..1796210%2C1796285..1796379%2C1796490..1796568%2C1797798..1797852%2C1797934..1798021%2C1798134..1798277%2C1799524..1799624%2C1800399..1800650);owner=coffea | |
| 48284 chr10 manual_curation exon 22693527 22694020 . - . Parent=GSCOCT00035359001 | |
| 48285 chr10 manual_curation exon 22690380 22690618 . - . Parent=GSCOCT00035359001 | |
| 48286 chr10 manual_curation exon 22690150 22690296 . - . Parent=GSCOCT00035359001 | |
| 48287 chr10 manual_curation exon 22689839 22690000 . - . Parent=GSCOCT00035359001 | |
| 48288 chr10 manual_curation exon 22689658 22689741 . - . Parent=GSCOCT00035359001 | |
| 48289 chr10 manual_curation exon 22689398 22689474 . - . Parent=GSCOCT00035359001 | |
| 48290 chr10 manual_curation exon 22688946 22689303 . - . Parent=GSCOCT00035359001 | |
| 48291 chr10 manual_curation exon 22688689 22688844 . - . Parent=GSCOCT00035359001 | |
| 48292 chr10 manual_curation exon 22688510 22688607 . - . Parent=GSCOCT00035359001 | |
| 48293 chr10 manual_curation exon 22688393 22688441 . - . Parent=GSCOCT00035359001 | |
| 48294 chr10 manual_curation exon 22688167 22688322 . - . Parent=GSCOCT00035359001 | |
| 48295 chr10 manual_curation exon 22687940 22688083 . - . Parent=GSCOCT00035359001 | |
| 48296 chr10 manual_curation exon 22687755 22687851 . - . Parent=GSCOCT00035359001 | |
| 48297 chr10 manual_curation exon 22687308 22687472 . - . Parent=GSCOCT00035359001 | |
| 48298 chr10 manual_curation exon 22687144 22687192 . - . Parent=GSCOCT00035359001 | |
| 48299 chr10 manual_curation exon 22686975 22687069 . - . Parent=GSCOCT00035359001 | |
| 48300 chr10 manual_curation exon 22686786 22686864 . - . Parent=GSCOCT00035359001 | |
| 48301 chr10 manual_curation exon 22685502 22685556 . - . Parent=GSCOCT00035359001 | |
| 48302 chr10 manual_curation exon 22685333 22685420 . - . Parent=GSCOCT00035359001 | |
| 48303 chr10 manual_curation exon 22685077 22685220 . - . Parent=GSCOCT00035359001 | |
| 48304 chr10 manual_curation exon 22683730 22683830 . - . Parent=GSCOCT00035359001 | |
| 48305 chr10 manual_curation exon 22682367 22682955 . - . Parent=GSCOCT00035359001 | |
| 48306 chr10 manual_curation CDS 22693527 22693839 . - 0 Parent=GSCOCT00035359001 | |
| 48307 chr10 manual_curation CDS 22690380 22690618 . - 1 Parent=GSCOCT00035359001 | |
| 48308 chr10 manual_curation CDS 22690150 22690296 . - 0 Parent=GSCOCT00035359001 | |
| 48309 chr10 manual_curation CDS 22689839 22690000 . - 0 Parent=GSCOCT00035359001 | |
| 48310 chr10 manual_curation CDS 22689658 22689741 . - 0 Parent=GSCOCT00035359001 | |
| 48311 chr10 manual_curation CDS 22689398 22689474 . - 0 Parent=GSCOCT00035359001 | |
| 48312 chr10 manual_curation CDS 22688946 22689303 . - 2 Parent=GSCOCT00035359001 | |
| 48313 chr10 manual_curation CDS 22688689 22688844 . - 0 Parent=GSCOCT00035359001 | |
| 48314 chr10 manual_curation CDS 22688510 22688607 . - 0 Parent=GSCOCT00035359001 | |
| 48315 chr10 manual_curation CDS 22688393 22688441 . - 2 Parent=GSCOCT00035359001 | |
| 48316 chr10 manual_curation CDS 22688167 22688322 . - 0 Parent=GSCOCT00035359001 | |
| 48317 chr10 manual_curation CDS 22687940 22688083 . - 0 Parent=GSCOCT00035359001 | |
| 48318 chr10 manual_curation CDS 22687755 22687851 . - 0 Parent=GSCOCT00035359001 | |
| 48319 chr10 manual_curation CDS 22687308 22687472 . - 1 Parent=GSCOCT00035359001 | |
| 48320 chr10 manual_curation CDS 22687144 22687192 . - 1 Parent=GSCOCT00035359001 | |
| 48321 chr10 manual_curation CDS 22686975 22687069 . - 2 Parent=GSCOCT00035359001 | |
| 48322 chr10 manual_curation CDS 22686786 22686864 . - 1 Parent=GSCOCT00035359001 | |
| 48323 chr10 manual_curation CDS 22685502 22685556 . - 2 Parent=GSCOCT00035359001 | |
| 48324 chr10 manual_curation CDS 22685333 22685420 . - 0 Parent=GSCOCT00035359001 | |
| 48325 chr10 manual_curation CDS 22685077 22685220 . - 1 Parent=GSCOCT00035359001 | |
| 48326 chr10 manual_curation CDS 22683730 22683830 . - 1 Parent=GSCOCT00035359001 | |
| 48327 chr10 manual_curation CDS 22682704 22682955 . - 0 Parent=GSCOCT00035359001 | |
| 48328 chr10 manual_curation gene 22694693 22699160 . + . ID=GSCOCG00035358001;Name=Cc10_g12980 | |
| 48329 chr10 manual_curation mRNA 22694693 22699160 . + . ID=GSCOCT00035358001;Parent=GSCOCG00035358001;Name=Cc10_g12980 | |
| 48330 chr10 manual_curation polypeptide 22694693 22698945 . + . ID=GSCOCP00035358001;Dbxref=InterPro:IPR004263,PFAM:PF03016,SwissProt:Q10SX7,SwissProt:Q3E7Q9,SwissProt:Q6NMM8,TAIR:AT1G21480.1,TAIR:AT5G22940.1,TAIR:AT5G25310.1,TrEMBL:B9GTN0,TrEMBL:B9SJK6,TrEMBL:E0CQM9;Derives_from=GSCOCT00035358001;Name=Cc10_g12980;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:2.4.1.224,PRODUCT:Putative Probable glucuronoxylan glucuronosyltransferase F8H,CC_functional_completeness:complete,CC_gene:F8H,CC_gene:Os03g0107900,CC_gene:At5g25310;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035358001~ Putative Probable glucuronoxylan glucuronosyltransferase F8H~ F8H~ complete;original_location=complement(join(1788296..1788661%2C1787502..1787648%2C1787187..1787251%2C1786634..1786703%2C1785745..1785960%2C1784936..1785079%2C1784714..1784849%2C1784409..1784638));owner=coffea | |
| 48331 chr10 manual_curation exon 22698716 22699160 . + . Parent=GSCOCT00035358001 | |
| 48332 chr10 manual_curation exon 22698505 22698640 . + . Parent=GSCOCT00035358001 | |
| 48333 chr10 manual_curation exon 22698275 22698418 . + . Parent=GSCOCT00035358001 | |
| 48334 chr10 manual_curation exon 22697394 22697609 . + . Parent=GSCOCT00035358001 | |
| 48335 chr10 manual_curation exon 22696651 22696720 . + . Parent=GSCOCT00035358001 | |
| 48336 chr10 manual_curation exon 22696103 22696167 . + . Parent=GSCOCT00035358001 | |
| 48337 chr10 manual_curation exon 22695706 22695852 . + . Parent=GSCOCT00035358001 | |
| 48338 chr10 manual_curation exon 22694693 22695058 . + . Parent=GSCOCT00035358001 | |
| 48339 chr10 manual_curation CDS 22698716 22698945 . + 1 Parent=GSCOCT00035358001 | |
| 48340 chr10 manual_curation CDS 22698505 22698640 . + 0 Parent=GSCOCT00035358001 | |
| 48341 chr10 manual_curation CDS 22698275 22698418 . + 0 Parent=GSCOCT00035358001 | |
| 48342 chr10 manual_curation CDS 22697394 22697609 . + 0 Parent=GSCOCT00035358001 | |
| 48343 chr10 manual_curation CDS 22696651 22696720 . + 2 Parent=GSCOCT00035358001 | |
| 48344 chr10 manual_curation CDS 22696103 22696167 . + 0 Parent=GSCOCT00035358001 | |
| 48345 chr10 manual_curation CDS 22695706 22695852 . + 0 Parent=GSCOCT00035358001 | |
| 48346 chr10 manual_curation CDS 22694693 22695058 . + 0 Parent=GSCOCT00035358001 | |
| 48347 chr10 manual_curation gene 22700230 22702179 . + . ID=GSCOCG00035357001;Name=Cc10_g12990 | |
| 48348 chr10 manual_curation mRNA 22700230 22702179 . + . ID=GSCOCT00035357001;Parent=GSCOCG00035357001;Name=Cc10_g12990 | |
| 48349 chr10 manual_curation polypeptide 22700437 22702094 . + . ID=GSCOCP00035357001;Dbxref=GENE3D:G3DSA:3.40.1000.10,InterPro:IPR002683,InterPro:IPR016123,InterPro:IPR016124,PFAM:PF01789,SUPERFAMILY:SSF55724,SwissProt:O49292,SwissProt:Q9LXX5,TAIR:AT1G77090.1,TAIR:AT3G56650.1,TrEMBL:B9SJK7,TrEMBL:E0CQM8,TrEMBL:I1KAJ2;Derives_from=GSCOCT00035357001;Name=Cc10_g12990;Ontology_term=CC_evidence_code:ISS,GO:0005509,GO:0009654,GO:0015979,GO:0019898,CC_EC_number:missing_EC_number,PRODUCT:PsbP domain-containing protein 4%2C chloroplastic,CC_functional_completeness:complete,CC_gene:PPD4,CC_gene:PPD6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035357001~ PsbP domain-containing protein 4%2C chloroplastic~ PPD4~ complete;original_location=complement(join(1782599..1782917%2C1782167..1782270%2C1781865..1781976%2C1781413..1781640%2C1781260..1781324));owner=coffea | |
| 48350 chr10 manual_curation exon 22702030 22702179 . + . Parent=GSCOCT00035357001 | |
| 48351 chr10 manual_curation exon 22701714 22701941 . + . Parent=GSCOCT00035357001 | |
| 48352 chr10 manual_curation exon 22701378 22701489 . + . Parent=GSCOCT00035357001 | |
| 48353 chr10 manual_curation exon 22701084 22701187 . + . Parent=GSCOCT00035357001 | |
| 48354 chr10 manual_curation exon 22700230 22700755 . + . Parent=GSCOCT00035357001 | |
| 48355 chr10 manual_curation CDS 22702030 22702094 . + 1 Parent=GSCOCT00035357001 | |
| 48356 chr10 manual_curation CDS 22701714 22701941 . + 1 Parent=GSCOCT00035357001 | |
| 48357 chr10 manual_curation CDS 22701378 22701489 . + 0 Parent=GSCOCT00035357001 | |
| 48358 chr10 manual_curation CDS 22701084 22701187 . + 1 Parent=GSCOCT00035357001 | |
| 48359 chr10 manual_curation CDS 22700437 22700755 . + 0 Parent=GSCOCT00035357001 | |
| 48360 chr10 manual_curation gene 22702281 22704486 . - . ID=GSCOCG00035356001;Name=Cc10_g13000 | |
| 48361 chr10 manual_curation mRNA 22702281 22704486 . - . ID=GSCOCT00035356001;Parent=GSCOCG00035356001;Name=Cc10_g13000 | |
| 48362 chr10 manual_curation polypeptide 22702729 22704102 . - . ID=GSCOCP00035356001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q9LS72,SwissProt:Q9LVF9,SwissProt:Q9SY02,TAIR:AT3G21470.1,TAIR:AT3G29230.1,TAIR:AT4G02750.1,TIGRFAMs:TIGR00756,TrEMBL:B9GTN2,TrEMBL:E0CQM7,TrEMBL:G7J5M1;Derives_from=GSCOCT00035356001;Name=Cc10_g13000;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Pentatricopeptide repeat-containing protein At3g21470,CC_functional_completeness:complete,CC_gene:PCMP-E29,CC_gene:PCMP-E27,CC_gene:PCMP-H24;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035356001~ Putative Pentatricopeptide repeat-containing protein At3g21470~ PCMP-E29~ complete;original_location=1779252..1780625;owner=coffea | |
| 48363 chr10 manual_curation exon 22702281 22704486 . - . Parent=GSCOCT00035356001 | |
| 48364 chr10 manual_curation CDS 22702729 22704102 . - 0 Parent=GSCOCT00035356001 | |
| 48365 chr10 manual_curation gene 22705273 22709926 . + . ID=GSCOCG00035355001;Name=Cc10_g13010 | |
| 48366 chr10 manual_curation mRNA 22705273 22709926 . + . ID=GSCOCT00035355001;Parent=GSCOCG00035355001;Name=Cc10_g13010 | |
| 48367 chr10 manual_curation polypeptide 22708685 22709588 . + . ID=GSCOCP00035355001;Dbxref=InterPro:IPR002068,InterPro:IPR008978,PROFILE:PS01031,SUPERFAMILY:SSF49764,TAIR:AT1G20870.1,TAIR:AT1G54850.1,TAIR:AT1G76440.1,TrEMBL:F6I6V8,TrEMBL:G7IR56,TrEMBL:I1MDP9;Derives_from=GSCOCT00035355001;Name=Cc10_g13010;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:HSP20-like chaperones superfamily protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035355001~ HSP20-like chaperones superfamily protein~ unknown_gene~ modules;original_location=complement(join(1774189..1774669%2C1773766..1774025));owner=coffea | |
| 48368 chr10 manual_curation exon 22705273 22705413 . + . Parent=GSCOCT00035355001 | |
| 48369 chr10 manual_curation exon 22709329 22709926 . + . Parent=GSCOCT00035355001 | |
| 48370 chr10 manual_curation exon 22708631 22709165 . + . Parent=GSCOCT00035355001 | |
| 48371 chr10 manual_curation CDS 22709329 22709588 . + 1 Parent=GSCOCT00035355001 | |
| 48372 chr10 manual_curation CDS 22708685 22709165 . + 0 Parent=GSCOCT00035355001 | |
| 48373 chr10 manual_curation gene 22719666 22721294 . + . ID=GSCOCG00035354001;Name=Cc10_g13020 | |
| 48374 chr10 manual_curation mRNA 22719666 22721294 . + . ID=GSCOCT00035354001;Parent=GSCOCG00035354001;Name=Cc10_g13020 | |
| 48375 chr10 manual_curation polypeptide 22719666 22721294 . + . ID=GSCOCP00035354001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:O22137,SwissProt:O82380,SwissProt:Q9SY02,TAIR:AT2G29760.1,TAIR:AT2G45350.1,TAIR:AT4G02750.1,TIGRFAMs:TIGR00756,TrEMBL:F6H094,TrEMBL:G8JBG7,TrEMBL:Q8LIP4;Derives_from=GSCOCT00035354001;Name=Cc10_g13020;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Pentatricopeptide repeat-containing protein At2g29760%2C chloroplastic,CC_functional_completeness:complete,CC_gene:PCMP-H33,CC_gene:PCMP-H24,CC_gene:CRR4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035354001~ Putative Pentatricopeptide repeat-containing protein At2g29760%2C chloroplastic~ PCMP-H33~ complete;original_location=complement(1762060..1763688);owner=coffea | |
| 48376 chr10 manual_curation exon 22719666 22721294 . + . Parent=GSCOCT00035354001 | |
| 48377 chr10 manual_curation CDS 22719666 22721294 . + 0 Parent=GSCOCT00035354001 | |
| 48378 chr10 manual_curation gene 22721643 22724864 . - . ID=GSCOCG00035352001;Name=Cc10_g13030 | |
| 48379 chr10 manual_curation mRNA 22721643 22724864 . - . ID=GSCOCT00035352001;Parent=GSCOCG00035352001;Name=Cc10_g13030 | |
| 48380 chr10 manual_curation polypeptide 22722353 22723735 . - . ID=GSCOCP00035352001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,PROSITE:PS00375,SwissProt:Q5NTH0,SwissProt:Q66PF2,SwissProt:Q8GVE3,TAIR:AT1G64910.1,TAIR:AT2G22930.1,TAIR:AT5G65550.1,TrEMBL:B6EWZ4,TrEMBL:F6HIX7,TrEMBL:F6I5W2;Derives_from=GSCOCT00035352001;Name=Cc10_g13030;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:Putative Cyanidin-3-O-glucoside 2-O-glucuronosyltransferase,CC_functional_completeness:complete,CC_gene:UGAT,CC_gene:C12RT1,CC_gene:GT4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035352001~ Putative Cyanidin-3-O-glucoside 2-O-glucuronosyltransferase~ UGAT~ complete;original_location=1759619..1761001;owner=coffea | |
| 48381 chr10 manual_curation exon 22721643 22724864 . - . Parent=GSCOCT00035352001 | |
| 48382 chr10 manual_curation CDS 22722353 22723735 . - 0 Parent=GSCOCT00035352001 | |
| 48383 chr10 manual_curation gene 22729219 22730649 . - . ID=GSCOCG00035350001;Name=Cc10_g13040 | |
| 48384 chr10 manual_curation mRNA 22729219 22730649 . - . ID=GSCOCT00035350001;Parent=GSCOCG00035350001;Name=Cc10_g13040 | |
| 48385 chr10 manual_curation polypeptide 22729219 22730649 . - . ID=GSCOCP00035350001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,PROSITE:PS00375,SwissProt:Q5NTH0,SwissProt:Q66PF2,SwissProt:Q8GVE3,TAIR:AT2G22930.1,TAIR:AT4G27570.1,TAIR:AT5G54010.1,TrEMBL:B6EWZ4,TrEMBL:F6HIX7,TrEMBL:F6I5W2;Derives_from=GSCOCT00035350001;Name=Cc10_g13040;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:Putative Cyanidin-3-O-glucoside 2-O-glucuronosyltransferase,CC_functional_completeness:complete,CC_gene:UGAT,CC_gene:C12RT1,CC_gene:GT4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035350001~ Putative Cyanidin-3-O-glucoside 2-O-glucuronosyltransferase~ UGAT~ complete;original_location=1752705..1754135;owner=coffea | |
| 48386 chr10 manual_curation exon 22729219 22730649 . - . Parent=GSCOCT00035350001 | |
| 48387 chr10 manual_curation CDS 22729219 22730649 . - 0 Parent=GSCOCT00035350001 | |
| 48388 chr10 manual_curation gene 22732644 22733314 . - . ID=GSCOCG00035349001;Name=Cc10_g13050 | |
| 48389 chr10 manual_curation mRNA 22732644 22733314 . - . ID=GSCOCT00035349001;Parent=GSCOCG00035349001;Name=Cc10_g13050 | |
| 48390 chr10 manual_curation polypeptide 22732969 22733160 . - . ID=GSCOCP00035349001;Dbxref=TrEMBL:B6EWZ0,TrEMBL:F6I5W2;Derives_from=GSCOCT00035349001;Name=Cc10_g13050;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035349001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=1750194..1750385;owner=coffea | |
| 48391 chr10 manual_curation exon 22732644 22733314 . - . Parent=GSCOCT00035349001 | |
| 48392 chr10 manual_curation CDS 22732969 22733160 . - 0 Parent=GSCOCT00035349001 | |
| 48393 chr10 manual_curation gene 22734453 22735763 . - . ID=GSCOCG00035348001;Name=Cc10_g13060 | |
| 48394 chr10 manual_curation mRNA 22734453 22735763 . - . ID=GSCOCT00035348001;Parent=GSCOCG00035348001;Name=Cc10_g13060 | |
| 48395 chr10 manual_curation polypeptide 22734453 22735433 . - . ID=GSCOCP00035348001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,SwissProt:Q5NTH0,SwissProt:Q66PF2,SwissProt:Q8GVE3,TAIR:AT2G22930.1,TAIR:AT4G27560.1,TAIR:AT4G27570.1,TrEMBL:F6HIX7,TrEMBL:F6I5W2,TrEMBL:H6SV51;Derives_from=GSCOCT00035348001;Name=Cc10_g13060;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:Putative Cyanidin-3-O-glucoside 2-O-glucuronosyltransferase,CC_functional_completeness:fragment,CC_gene:UGAT,CC_gene:C12RT1,CC_gene:GT4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035348001~ Putative Cyanidin-3-O-glucoside 2-O-glucuronosyltransferase~ UGAT~ fragment;original_location=1747921..1748901;owner=coffea | |
| 48396 chr10 manual_curation exon 22734453 22735763 . - . Parent=GSCOCT00035348001 | |
| 48397 chr10 manual_curation CDS 22734453 22735433 . - 0 Parent=GSCOCT00035348001 | |
| 48398 chr10 manual_curation gene 22771387 22772827 . - . ID=GSCOCG00035347001;Name=Cc10_g13070 | |
| 48399 chr10 manual_curation mRNA 22771387 22772827 . - . ID=GSCOCT00035347001;Parent=GSCOCG00035347001;Name=Cc10_g13070 | |
| 48400 chr10 manual_curation polypeptide 22771387 22772754 . - . ID=GSCOCP00035347001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,PROSITE:PS00375,SwissProt:O81010,SwissProt:Q5NTH0,SwissProt:Q8GVE3,TAIR:AT2G22930.1,TAIR:AT4G27570.1,TAIR:AT5G65550.1,TrEMBL:F6HIX7,TrEMBL:F6I0D3,TrEMBL:F6I5W2;Derives_from=GSCOCT00035347001;Name=Cc10_g13070;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:Putative Cyanidin-3-O-glucoside 2-O-glucuronosyltransferase,CC_functional_completeness:complete,CC_gene:UGAT,CC_gene:C12RT1,CC_gene:UGT79B8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035347001~ Putative Cyanidin-3-O-glucoside 2-O-glucuronosyltransferase~ UGAT~ complete;original_location=1710600..1711967;owner=coffea | |
| 48401 chr10 manual_curation exon 22771387 22772827 . - . Parent=GSCOCT00035347001 | |
| 48402 chr10 manual_curation CDS 22771387 22772754 . - 0 Parent=GSCOCT00035347001 | |
| 48403 chr10 manual_curation gene 22823103 22826743 . + . ID=GSCOCG00035343001;Name=Cc10_g13080 | |
| 48404 chr10 manual_curation mRNA 22823103 22826743 . + . ID=GSCOCT00035343001;Parent=GSCOCG00035343001;Name=Cc10_g13080 | |
| 48405 chr10 manual_curation polypeptide 22823542 22826665 . + . ID=GSCOCP00035343001;Dbxref=InterPro:IPR004316,InterPro:IPR018169,InterPro:IPR018179,PANTHER:PTHR10791,PANTHER:PTHR10791:SF6,PFAM:PF03083,SwissProt:B8AYH1,SwissProt:Q8L9J7,SwissProt:Q8RZQ8,TAIR:AT1G21460.1,TAIR:AT4G10850.1,TAIR:AT5G62850.1,TrEMBL:B9H7N2,TrEMBL:B9SJK9,TrEMBL:D7KK13;Derives_from=GSCOCT00035343001;Name=Cc10_g13080;Ontology_term=CC_evidence_code:ISS,GO:0016020,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Bidirectional sugar transporter SWEET1,CC_functional_completeness:complete,CC_gene:SWEET1,CC_gene:SWEET1A,CC_gene:SWEET1B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035343001~ Bidirectional sugar transporter SWEET1~ SWEET1~ complete;original_location=complement(join(1659776..1659812%2C1659619..1659655%2C1659404..1659499%2C1657952..1658231%2C1657291..1657410%2C1656689..1656868));owner=coffea | |
| 48406 chr10 manual_curation exon 22826486 22826743 . + . Parent=GSCOCT00035343001 | |
| 48407 chr10 manual_curation exon 22825944 22826063 . + . Parent=GSCOCT00035343001 | |
| 48408 chr10 manual_curation exon 22825123 22825402 . + . Parent=GSCOCT00035343001 | |
| 48409 chr10 manual_curation exon 22823855 22823950 . + . Parent=GSCOCT00035343001 | |
| 48410 chr10 manual_curation exon 22823699 22823735 . + . Parent=GSCOCT00035343001 | |
| 48411 chr10 manual_curation exon 22823103 22823578 . + . Parent=GSCOCT00035343001 | |
| 48412 chr10 manual_curation CDS 22826486 22826665 . + 0 Parent=GSCOCT00035343001 | |
| 48413 chr10 manual_curation CDS 22825944 22826063 . + 0 Parent=GSCOCT00035343001 | |
| 48414 chr10 manual_curation CDS 22825123 22825402 . + 2 Parent=GSCOCT00035343001 | |
| 48415 chr10 manual_curation CDS 22823855 22823950 . + 2 Parent=GSCOCT00035343001 | |
| 48416 chr10 manual_curation CDS 22823699 22823735 . + 1 Parent=GSCOCT00035343001 | |
| 48417 chr10 manual_curation CDS 22823542 22823578 . + 0 Parent=GSCOCT00035343001 | |
| 48418 chr10 manual_curation gene 22839122 22842440 . + . ID=GSCOCG00035340001;Name=Cc10_g13090 | |
| 48419 chr10 manual_curation mRNA 22839122 22842440 . + . ID=GSCOCT00035340001;Parent=GSCOCG00035340001;Name=Cc10_g13090 | |
| 48420 chr10 manual_curation polypeptide 22839380 22842206 . + . ID=GSCOCP00035340001;Dbxref=InterPro:IPR004316,InterPro:IPR018169,InterPro:IPR018179,PANTHER:PTHR10791,PANTHER:PTHR10791:SF6,PFAM:PF03083,SwissProt:B8AYH1,SwissProt:Q8L9J7,SwissProt:Q8RZQ8,TAIR:AT1G21460.1,TAIR:AT4G10850.1,TAIR:AT5G53190.1,TrEMBL:B9SJK9,TrEMBL:I1JYX9,TrEMBL:I1KAI8;Derives_from=GSCOCT00035340001;Name=Cc10_g13090;Ontology_term=CC_evidence_code:ISS,GO:0016020,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Bidirectional sugar transporter SWEET1,CC_functional_completeness:complete,CC_gene:SWEET1,CC_gene:SWEET1A,CC_gene:SWEET1B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035340001~ Bidirectional sugar transporter SWEET1~ SWEET1~ complete;original_location=complement(join(1643938..1643974%2C1643773..1643809%2C1643344..1643439%2C1642535..1642814%2C1641753..1641872%2C1641148..1641324));owner=coffea | |
| 48421 chr10 manual_curation exon 22842030 22842440 . + . Parent=GSCOCT00035340001 | |
| 48422 chr10 manual_curation exon 22841482 22841601 . + . Parent=GSCOCT00035340001 | |
| 48423 chr10 manual_curation exon 22840540 22840819 . + . Parent=GSCOCT00035340001 | |
| 48424 chr10 manual_curation exon 22839915 22840010 . + . Parent=GSCOCT00035340001 | |
| 48425 chr10 manual_curation exon 22839545 22839581 . + . Parent=GSCOCT00035340001 | |
| 48426 chr10 manual_curation exon 22839122 22839416 . + . Parent=GSCOCT00035340001 | |
| 48427 chr10 manual_curation CDS 22842030 22842206 . + 0 Parent=GSCOCT00035340001 | |
| 48428 chr10 manual_curation CDS 22841482 22841601 . + 0 Parent=GSCOCT00035340001 | |
| 48429 chr10 manual_curation CDS 22840540 22840819 . + 2 Parent=GSCOCT00035340001 | |
| 48430 chr10 manual_curation CDS 22839915 22840010 . + 2 Parent=GSCOCT00035340001 | |
| 48431 chr10 manual_curation CDS 22839545 22839581 . + 1 Parent=GSCOCT00035340001 | |
| 48432 chr10 manual_curation CDS 22839380 22839416 . + 0 Parent=GSCOCT00035340001 | |
| 48433 chr10 manual_curation gene 22846518 22846843 . - . ID=GSCOCG00035339001;Name=Cc10_g13100 | |
| 48434 chr10 manual_curation mRNA 22846518 22846843 . - . ID=GSCOCT00035339001;Parent=GSCOCG00035339001;Name=Cc10_g13100 | |
| 48435 chr10 manual_curation polypeptide 22846518 22846827 . - . ID=GSCOCP00035339001;Derives_from=GSCOCT00035339001;Name=Cc10_g13100;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035339001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(1636527..1636587%2C1636685..1636836);owner=coffea | |
| 48436 chr10 manual_curation exon 22846767 22846843 . - . Parent=GSCOCT00035339001 | |
| 48437 chr10 manual_curation exon 22846518 22846669 . - . Parent=GSCOCT00035339001 | |
| 48438 chr10 manual_curation CDS 22846767 22846827 . - 0 Parent=GSCOCT00035339001 | |
| 48439 chr10 manual_curation CDS 22846518 22846669 . - 1 Parent=GSCOCT00035339001 | |
| 48440 chr10 manual_curation gene 22872609 22882401 . + . ID=GSCOCG00035338001;Name=Cc10_g13110 | |
| 48441 chr10 manual_curation mRNA 22872609 22882401 . + . ID=GSCOCT00035338001;Parent=GSCOCG00035338001;Name=Cc10_g13110 | |
| 48442 chr10 manual_curation polypeptide 22873817 22881726 . + . ID=GSCOCP00035338001;Dbxref=SwissProt:Q8W234,TAIR:AT1G43850.1,TAIR:AT4G25520.1,TAIR:AT5G62090.1,TrEMBL:B9GTN7,TrEMBL:B9S2M5,TrEMBL:I1JYY1;Derives_from=GSCOCT00035338001;Name=Cc10_g13110;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Transcriptional corepressor SEUSS,CC_functional_completeness:complete,CC_gene:SEU;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035338001~ Transcriptional corepressor SEUSS~ SEU~ complete;original_location=complement(join(1608449..1609537%2C1608231..1608350%2C1607702..1607750%2C1607284..1607498%2C1607124..1607192%2C1606182..1606279%2C1605184..1605277%2C1603334..1603403%2C1601628..1602577));owner=coffea | |
| 48443 chr10 manual_curation exon 22872609 22872878 . + . Parent=GSCOCT00035338001 | |
| 48444 chr10 manual_curation exon 22880777 22882401 . + . Parent=GSCOCT00035338001 | |
| 48445 chr10 manual_curation exon 22879951 22880020 . + . Parent=GSCOCT00035338001 | |
| 48446 chr10 manual_curation exon 22878077 22878170 . + . Parent=GSCOCT00035338001 | |
| 48447 chr10 manual_curation exon 22877075 22877172 . + . Parent=GSCOCT00035338001 | |
| 48448 chr10 manual_curation exon 22876162 22876230 . + . Parent=GSCOCT00035338001 | |
| 48449 chr10 manual_curation exon 22875856 22876070 . + . Parent=GSCOCT00035338001 | |
| 48450 chr10 manual_curation exon 22875604 22875652 . + . Parent=GSCOCT00035338001 | |
| 48451 chr10 manual_curation exon 22875004 22875123 . + . Parent=GSCOCT00035338001 | |
| 48452 chr10 manual_curation exon 22873423 22874905 . + . Parent=GSCOCT00035338001 | |
| 48453 chr10 manual_curation CDS 22880777 22881726 . + 1 Parent=GSCOCT00035338001 | |
| 48454 chr10 manual_curation CDS 22879951 22880020 . + 0 Parent=GSCOCT00035338001 | |
| 48455 chr10 manual_curation CDS 22878077 22878170 . + 2 Parent=GSCOCT00035338001 | |
| 48456 chr10 manual_curation CDS 22877075 22877172 . + 0 Parent=GSCOCT00035338001 | |
| 48457 chr10 manual_curation CDS 22876162 22876230 . + 0 Parent=GSCOCT00035338001 | |
| 48458 chr10 manual_curation CDS 22875856 22876070 . + 1 Parent=GSCOCT00035338001 | |
| 48459 chr10 manual_curation CDS 22875604 22875652 . + 0 Parent=GSCOCT00035338001 | |
| 48460 chr10 manual_curation CDS 22875004 22875123 . + 0 Parent=GSCOCT00035338001 | |
| 48461 chr10 manual_curation CDS 22873817 22874905 . + 0 Parent=GSCOCT00035338001 | |
| 48462 chr10 manual_curation gene 22889706 22892258 . + . ID=GSCOCG00035337001;Name=Cc10_g13120 | |
| 48463 chr10 manual_curation mRNA 22889706 22892258 . + . ID=GSCOCT00035337001;Parent=GSCOCG00035337001;Name=Cc10_g13120 | |
| 48464 chr10 manual_curation polypeptide 22889706 22892258 . + . ID=GSCOCP00035337001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR015748,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PANTHER:PTHR22986:SF64,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:O22040,SwissProt:O22042,SwissProt:Q9FZ36,TAIR:AT1G53570.1,TAIR:AT1G63700.1,TAIR:AT5G66850.1,TrEMBL:B9SUR2,TrEMBL:F6I0E6,TrEMBL:F8J347;Derives_from=GSCOCT00035337001;Name=Cc10_g13120;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:ANP1,CC_gene:ANP2,CC_gene:ANP3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035337001~ Putative uncharacterized protein~ ANP1~ fragment;original_location=complement(join(1593490..1593648%2C1593290..1593447%2C1592761..1593024%2C1592531..1592618%2C1592375..1592437%2C1592124..1592284%2C1591947..1592022%2C1591590..1591649%2C1591380..1591487%2C1591096..1591293));owner=coffea | |
| 48465 chr10 manual_curation exon 22892061 22892258 . + . Parent=GSCOCT00035337001 | |
| 48466 chr10 manual_curation exon 22891867 22891974 . + . Parent=GSCOCT00035337001 | |
| 48467 chr10 manual_curation exon 22891705 22891764 . + . Parent=GSCOCT00035337001 | |
| 48468 chr10 manual_curation exon 22891332 22891407 . + . Parent=GSCOCT00035337001 | |
| 48469 chr10 manual_curation exon 22891070 22891230 . + . Parent=GSCOCT00035337001 | |
| 48470 chr10 manual_curation exon 22890917 22890979 . + . Parent=GSCOCT00035337001 | |
| 48471 chr10 manual_curation exon 22890736 22890823 . + . Parent=GSCOCT00035337001 | |
| 48472 chr10 manual_curation exon 22890330 22890593 . + . Parent=GSCOCT00035337001 | |
| 48473 chr10 manual_curation exon 22889907 22890064 . + . Parent=GSCOCT00035337001 | |
| 48474 chr10 manual_curation exon 22889706 22889864 . + . Parent=GSCOCT00035337001 | |
| 48475 chr10 manual_curation CDS 22892061 22892258 . + 0 Parent=GSCOCT00035337001 | |
| 48476 chr10 manual_curation CDS 22891867 22891974 . + 0 Parent=GSCOCT00035337001 | |
| 48477 chr10 manual_curation CDS 22891705 22891764 . + 0 Parent=GSCOCT00035337001 | |
| 48478 chr10 manual_curation CDS 22891332 22891407 . + 2 Parent=GSCOCT00035337001 | |
| 48479 chr10 manual_curation CDS 22891070 22891230 . + 0 Parent=GSCOCT00035337001 | |
| 48480 chr10 manual_curation CDS 22890917 22890979 . + 0 Parent=GSCOCT00035337001 | |
| 48481 chr10 manual_curation CDS 22890736 22890823 . + 2 Parent=GSCOCT00035337001 | |
| 48482 chr10 manual_curation CDS 22890330 22890593 . + 2 Parent=GSCOCT00035337001 | |
| 48483 chr10 manual_curation CDS 22889907 22890064 . + 0 Parent=GSCOCT00035337001 | |
| 48484 chr10 manual_curation CDS 22889706 22889864 . + 0 Parent=GSCOCT00035337001 | |
| 48485 chr10 manual_curation gene 22893453 22897248 . - . ID=GSCOCG00035336001;Name=Cc10_g13130 | |
| 48486 chr10 manual_curation mRNA 22893453 22897248 . - . ID=GSCOCT00035336001;Parent=GSCOCG00035336001;Name=Cc10_g13130 | |
| 48487 chr10 manual_curation polypeptide 22893769 22897150 . - . ID=GSCOCP00035336001;Dbxref=InterPro:IPR002140,InterPro:IPR003604,InterPro:IPR018023,InterPro:IPR018978,InterPro:IPR019783,PANTHER:PTHR10927,PFAM:PF01172,PFAM:PF09377,PROSITE:PS01267,SMART:SM00451,SUPERFAMILY:SSF89895,SwissProt:P70122,SwissProt:Q3SWZ6,SwissProt:Q5RK30,TAIR:AT1G43860.1,TIGRFAMs:TIGR00291,TrEMBL:B9GTN9,TrEMBL:B9S2M8,TrEMBL:E0CQM1;Derives_from=GSCOCT00035336001;Name=Cc10_g13130;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Ribosome maturation protein SBDS,CC_functional_completeness:modules,CC_gene:SBDS,CC_gene:Sbds;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035336001~ Ribosome maturation protein SBDS~ SBDS~ modules;original_location=join(1586204..1586337%2C1586444..1586573%2C1587108..1587308%2C1588402..1588569%2C1589148..1589585);owner=coffea | |
| 48488 chr10 manual_curation exon 22897017 22897248 . - . Parent=GSCOCT00035336001 | |
| 48489 chr10 manual_curation exon 22896781 22896910 . - . Parent=GSCOCT00035336001 | |
| 48490 chr10 manual_curation exon 22896046 22896246 . - . Parent=GSCOCT00035336001 | |
| 48491 chr10 manual_curation exon 22894785 22894952 . - . Parent=GSCOCT00035336001 | |
| 48492 chr10 manual_curation exon 22893453 22894206 . - . Parent=GSCOCT00035336001 | |
| 48493 chr10 manual_curation CDS 22897017 22897150 . - 0 Parent=GSCOCT00035336001 | |
| 48494 chr10 manual_curation CDS 22896781 22896910 . - 2 Parent=GSCOCT00035336001 | |
| 48495 chr10 manual_curation CDS 22896046 22896246 . - 0 Parent=GSCOCT00035336001 | |
| 48496 chr10 manual_curation CDS 22894785 22894952 . - 0 Parent=GSCOCT00035336001 | |
| 48497 chr10 manual_curation CDS 22893769 22894206 . - 0 Parent=GSCOCT00035336001 | |
| 48498 chr10 manual_curation gene 22898634 22907014 . + . ID=GSCOCG00035335001;Name=Cc10_g13140 | |
| 48499 chr10 manual_curation mRNA 22898634 22907014 . + . ID=GSCOCT00035335001;Parent=GSCOCG00035335001;Name=Cc10_g13140 | |
| 48500 chr10 manual_curation polypeptide 22898634 22906746 . + . ID=GSCOCP00035335001;Dbxref=InterPro:IPR006055,InterPro:IPR012337,InterPro:IPR013520,PFAM:PF00929,SMART:SM00479,SUPERFAMILY:SSF53098,SwissProt:O94443,SwissProt:P53331,SwissProt:Q8L7M4,TAIR:AT3G50100.1,TAIR:AT5G05540.1,TAIR:AT5G25800.1,TrEMBL:B9H7M8,TrEMBL:B9S2M9,TrEMBL:F6H092;Derives_from=GSCOCT00035335001;Name=Cc10_g13140;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0004527,GO:0005622,CC_EC_number:3.1.13.1,PRODUCT:Small RNA degrading nuclease 5,CC_functional_completeness:complete,CC_gene:SDN5,CC_gene:SPAC637.09,CC_gene:RNH70;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035335001~ Small RNA degrading nuclease 5~ SDN5~ complete;original_location=complement(join(1584487..1584720%2C1583674..1583730%2C1583499..1583564%2C1582608..1582741%2C1582401..1582513%2C1581583..1581711%2C1581408..1581475%2C1580743..1580802%2C1580079..1580134%2C1579220..1579280%2C1578878..1579145%2C1577580..1577761%2C1577205..1577500%2C1576608..1576731));owner=coffea | |
| 48501 chr10 manual_curation exon 22906623 22907014 . + . Parent=GSCOCT00035335001 | |
| 48502 chr10 manual_curation exon 22905854 22906149 . + . Parent=GSCOCT00035335001 | |
| 48503 chr10 manual_curation exon 22905593 22905774 . + . Parent=GSCOCT00035335001 | |
| 48504 chr10 manual_curation exon 22904209 22904476 . + . Parent=GSCOCT00035335001 | |
| 48505 chr10 manual_curation exon 22904074 22904134 . + . Parent=GSCOCT00035335001 | |
| 48506 chr10 manual_curation exon 22903220 22903275 . + . Parent=GSCOCT00035335001 | |
| 48507 chr10 manual_curation exon 22902552 22902611 . + . Parent=GSCOCT00035335001 | |
| 48508 chr10 manual_curation exon 22901879 22901946 . + . Parent=GSCOCT00035335001 | |
| 48509 chr10 manual_curation exon 22901643 22901771 . + . Parent=GSCOCT00035335001 | |
| 48510 chr10 manual_curation exon 22900841 22900953 . + . Parent=GSCOCT00035335001 | |
| 48511 chr10 manual_curation exon 22900613 22900746 . + . Parent=GSCOCT00035335001 | |
| 48512 chr10 manual_curation exon 22899790 22899855 . + . Parent=GSCOCT00035335001 | |
| 48513 chr10 manual_curation exon 22899624 22899680 . + . Parent=GSCOCT00035335001 | |
| 48514 chr10 manual_curation exon 22898634 22898867 . + . Parent=GSCOCT00035335001 | |
| 48515 chr10 manual_curation CDS 22906623 22906746 . + 2 Parent=GSCOCT00035335001 | |
| 48516 chr10 manual_curation CDS 22905854 22906149 . + 0 Parent=GSCOCT00035335001 | |
| 48517 chr10 manual_curation CDS 22905593 22905774 . + 1 Parent=GSCOCT00035335001 | |
| 48518 chr10 manual_curation CDS 22904209 22904476 . + 0 Parent=GSCOCT00035335001 | |
| 48519 chr10 manual_curation CDS 22904074 22904134 . + 2 Parent=GSCOCT00035335001 | |
| 48520 chr10 manual_curation CDS 22903220 22903275 . + 0 Parent=GSCOCT00035335001 | |
| 48521 chr10 manual_curation CDS 22902552 22902611 . + 0 Parent=GSCOCT00035335001 | |
| 48522 chr10 manual_curation CDS 22901879 22901946 . + 1 Parent=GSCOCT00035335001 | |
| 48523 chr10 manual_curation CDS 22901643 22901771 . + 1 Parent=GSCOCT00035335001 | |
| 48524 chr10 manual_curation CDS 22900841 22900953 . + 2 Parent=GSCOCT00035335001 | |
| 48525 chr10 manual_curation CDS 22900613 22900746 . + 0 Parent=GSCOCT00035335001 | |
| 48526 chr10 manual_curation CDS 22899790 22899855 . + 0 Parent=GSCOCT00035335001 | |
| 48527 chr10 manual_curation CDS 22899624 22899680 . + 0 Parent=GSCOCT00035335001 | |
| 48528 chr10 manual_curation CDS 22898634 22898867 . + 0 Parent=GSCOCT00035335001 | |
| 48529 chr10 manual_curation gene 22908382 22912524 . - . ID=GSCOCG00035333001;Name=Cc10_g13150 | |
| 48530 chr10 manual_curation mRNA 22908382 22912524 . - . ID=GSCOCT00035333001;Parent=GSCOCG00035333001;Name=Cc10_g13150 | |
| 48531 chr10 manual_curation polypeptide 22908814 22910523 . - . ID=GSCOCP00035333001;Dbxref=InterPro:IPR005202,PFAM:PF03514,PROFILE:PS50985,SwissProt:Q69VG1,SwissProt:Q8GVE1,SwissProt:Q9SDQ3,TAIR:AT1G21450.1,TAIR:AT1G50600.1,TAIR:AT5G48150.1,TrEMBL:B9H7M7,TrEMBL:F6H091,TrEMBL:Q00LP3;Derives_from=GSCOCT00035333001;Name=Cc10_g13150;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Scarecrow-like protein 1,CC_functional_completeness:complete,CC_gene:SCL1,CC_gene:CIGR2,CC_gene:CIGR1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035333001~ Scarecrow-like protein 1~ SCL1~ complete;original_location=1572831..1574540;owner=coffea | |
| 48532 chr10 manual_curation exon 22908382 22912524 . - . Parent=GSCOCT00035333001 | |
| 48533 chr10 manual_curation CDS 22908814 22910523 . - 0 Parent=GSCOCT00035333001 | |
| 48534 chr10 manual_curation gene 22929509 22930253 . + . ID=GSCOCG00035332001;Name=Cc10_g13160 | |
| 48535 chr10 manual_curation mRNA 22929509 22930253 . + . ID=GSCOCT00035332001;Parent=GSCOCG00035332001;Name=Cc10_g13160 | |
| 48536 chr10 manual_curation polypeptide 22929509 22930253 . + . ID=GSCOCP00035332001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001005,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR014778,InterPro:IPR015495,InterPro:IPR017930,PANTHER:PTHR10641,PFAM:PF00249,PROFILE:PS51294,SMART:SM00717,SUPERFAMILY:SSF46689,SwissProt:B0G0Y5,SwissProt:P34127,SwissProt:Q9FDW1,TAIR:AT1G17950.1,TAIR:AT1G69560.1,TAIR:AT1G73410.1,TrEMBL:B9H7M6,TrEMBL:I1KAI1;Derives_from=GSCOCT00035332001;Name=Cc10_g13160;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:myb domain protein 52,CC_functional_completeness:fragment,CC_gene:MYB44,CC_gene:mybA,CC_gene:mybAA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035332001~ myb domain protein 52~ MYB44~ fragment;original_location=complement(join(1553689..1553845%2C1553211..1553455%2C1553101..1553121));owner=coffea | |
| 48537 chr10 manual_curation exon 22930233 22930253 . + . Parent=GSCOCT00035332001 | |
| 48538 chr10 manual_curation exon 22929899 22930143 . + . Parent=GSCOCT00035332001 | |
| 48539 chr10 manual_curation exon 22929509 22929665 . + . Parent=GSCOCT00035332001 | |
| 48540 chr10 manual_curation CDS 22930233 22930253 . + 0 Parent=GSCOCT00035332001 | |
| 48541 chr10 manual_curation CDS 22929899 22930143 . + 1 Parent=GSCOCT00035332001 | |
| 48542 chr10 manual_curation CDS 22929509 22929665 . + 0 Parent=GSCOCT00035332001 | |
| 48543 chr10 manual_curation gene 22967971 22968960 . + . ID=GSCOCG00035330001;Name=Cc10_g13170 | |
| 48544 chr10 manual_curation mRNA 22967971 22968960 . + . ID=GSCOCT00035330001;Parent=GSCOCG00035330001;Name=Cc10_g13170 | |
| 48545 chr10 manual_curation polypeptide 22967971 22968960 . + . ID=GSCOCP00035330001;Dbxref=TAIR:AT1G31130.1,TAIR:AT4G19950.1,TAIR:AT5G44860.1,TrEMBL:B9H7M4,TrEMBL:B9HES4,TrEMBL:B9S2N3;Derives_from=GSCOCT00035330001;Name=Cc10_g13170;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035330001~ Putative unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19950.1)%3B Has 246 Blast hits to 244 proteins in 29 species: Archae - 2%3B Bacteria - 16%3B Metazoa - 0%3B Fungi - 0%3B Plants - 222%3B Viruses - 0%3B Other Eukaryotes - 6 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(1514394..1515383);owner=coffea | |
| 48546 chr10 manual_curation exon 22967971 22968960 . + . Parent=GSCOCT00035330001 | |
| 48547 chr10 manual_curation CDS 22967971 22968960 . + 0 Parent=GSCOCT00035330001 | |
| 48548 chr10 manual_curation gene 22975906 22977533 . - . ID=GSCOCG00035329001;Name=Cc10_g13180 | |
| 48549 chr10 manual_curation mRNA 22975906 22977533 . - . ID=GSCOCT00035329001;Parent=GSCOCG00035329001;Name=Cc10_g13180 | |
| 48550 chr10 manual_curation polypeptide 22975906 22977533 . - . ID=GSCOCP00035329001;Dbxref=InterPro:IPR000103,InterPro:IPR013027,InterPro:IPR020946,PFAM:PF00743,PRINTS:PR00368,PRINTS:PR00469,SwissProt:O64489,SwissProt:Q9FVQ0,SwissProt:Q9LPL3,TAIR:AT1G04180.1,TAIR:AT1G21430.1,TAIR:AT1G48910.1,TrEMBL:B9S2N4,TrEMBL:F6GZU5,TrEMBL:F6GZV2;Derives_from=GSCOCT00035329001;Name=Cc10_g13180;Ontology_term=CC_evidence_code:ISS,GO:0004499,GO:0016491,GO:0050660,GO:0050661,GO:0055114,CC_EC_number:1.14.13.8,CC_EC_number:1.14.13.8,PRODUCT:Putative flavin-containing monooxygenase YUCCA11,CC_functional_completeness:complete,CC_gene:YUC11,CC_gene:YUC10,CC_gene:YUC9;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035329001~ Putative flavin-containing monooxygenase YUCCA11~ YUC11~ complete;original_location=join(1505821..1506435%2C1506725..1506958%2C1507066..1507188%2C1507269..1507448);owner=coffea | |
| 48551 chr10 manual_curation exon 22976919 22977533 . - . Parent=GSCOCT00035329001 | |
| 48552 chr10 manual_curation exon 22976396 22976629 . - . Parent=GSCOCT00035329001 | |
| 48553 chr10 manual_curation exon 22976166 22976288 . - . Parent=GSCOCT00035329001 | |
| 48554 chr10 manual_curation exon 22975906 22976085 . - . Parent=GSCOCT00035329001 | |
| 48555 chr10 manual_curation CDS 22976919 22977533 . - 0 Parent=GSCOCT00035329001 | |
| 48556 chr10 manual_curation CDS 22976396 22976629 . - 0 Parent=GSCOCT00035329001 | |
| 48557 chr10 manual_curation CDS 22976166 22976288 . - 0 Parent=GSCOCT00035329001 | |
| 48558 chr10 manual_curation CDS 22975906 22976085 . - 0 Parent=GSCOCT00035329001 | |
| 48559 chr10 manual_curation gene 22989349 22994251 . + . ID=GSCOCG00035328001;Name=Cc10_g13190 | |
| 48560 chr10 manual_curation mRNA 22989349 22994251 . + . ID=GSCOCT00035328001;Parent=GSCOCG00035328001;Name=Cc10_g13190 | |
| 48561 chr10 manual_curation polypeptide 22989629 22994251 . + . ID=GSCOCP00035328001;Dbxref=InterPro:IPR001806,InterPro:IPR002041,InterPro:IPR003577,InterPro:IPR003578,InterPro:IPR003579,InterPro:IPR005225,InterPro:IPR006688,InterPro:IPR013753,InterPro:IPR020851,PFAM:PF00071,PRINTS:PR00449,PROFILE:PS51419,SMART:SM00173,SMART:SM00174,SMART:SM00175,SMART:SM00176,SMART:SM00177,SwissProt:O49841,SwissProt:Q9SF92,TAIR:AT3G09910.1,TAIR:AT5G03530.1,TIGRFAMs:TIGR00231,TrEMBL:C6TJB7;Derives_from=GSCOCT00035328001;Name=Cc10_g13190;Ontology_term=CC_evidence_code:ISS,GO:0003924,GO:0005515,GO:0005525,GO:0005622,GO:0006886,GO:0006913,GO:0007165,GO:0007264,GO:0015031,CC_EC_number:missing_EC_number,PRODUCT:Ras-related protein RABC2a,CC_functional_completeness:complete,CC_gene:RABC1,CC_gene:RABC2A,CC_gene:RABC2B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035328001~ Ras-related protein RABC2a~ RABC1~ complete;original_location=complement(join(1493581..1493725%2C1491986..1492054%2C1490759..1490824%2C1490505..1490626%2C1490096..1490224%2C1489103..1489210));owner=coffea | |
| 48562 chr10 manual_curation exon 22989349 22989498 . + . Parent=GSCOCT00035328001 | |
| 48563 chr10 manual_curation exon 22994144 22994251 . + . Parent=GSCOCT00035328001 | |
| 48564 chr10 manual_curation exon 22993130 22993258 . + . Parent=GSCOCT00035328001 | |
| 48565 chr10 manual_curation exon 22992728 22992849 . + . Parent=GSCOCT00035328001 | |
| 48566 chr10 manual_curation exon 22992530 22992595 . + . Parent=GSCOCT00035328001 | |
| 48567 chr10 manual_curation exon 22991300 22991368 . + . Parent=GSCOCT00035328001 | |
| 48568 chr10 manual_curation exon 22989618 22989773 . + . Parent=GSCOCT00035328001 | |
| 48569 chr10 manual_curation CDS 22994144 22994251 . + 0 Parent=GSCOCT00035328001 | |
| 48570 chr10 manual_curation CDS 22993130 22993258 . + 0 Parent=GSCOCT00035328001 | |
| 48571 chr10 manual_curation CDS 22992728 22992849 . + 1 Parent=GSCOCT00035328001 | |
| 48572 chr10 manual_curation CDS 22992530 22992595 . + 1 Parent=GSCOCT00035328001 | |
| 48573 chr10 manual_curation CDS 22991300 22991368 . + 1 Parent=GSCOCT00035328001 | |
| 48574 chr10 manual_curation CDS 22989629 22989773 . + 0 Parent=GSCOCT00035328001 | |
| 48575 chr10 manual_curation gene 22994320 23001271 . - . ID=GSCOCG00035327001;Name=Cc10_g13200 | |
| 48576 chr10 manual_curation mRNA 22994320 23001271 . - . ID=GSCOCT00035327001;Parent=GSCOCG00035327001;Name=Cc10_g13200 | |
| 48577 chr10 manual_curation polypeptide 22995093 23001000 . - . ID=GSCOCP00035327001;Dbxref=GENE3D:G3DSA:3.60.40.10,InterPro:IPR000222,InterPro:IPR001932,InterPro:IPR014045,InterPro:IPR015655,PANTHER:PTHR13832,PFAM:PF00481,PROSITE:PS01032,SMART:SM00331,SMART:SM00332,SUPERFAMILY:SSF81606,SwissProt:Q4PSE8,SwissProt:Q8RXV3,SwissProt:Q8VZN9,TAIR:AT1G43900.1,TAIR:AT4G31750.1,TAIR:AT5G24940.1,TrEMBL:A9PIA5,TrEMBL:B9S2N7,TrEMBL:E0CQK4;Derives_from=GSCOCT00035327001;Name=Cc10_g13200;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004722,GO:0006470,GO:0008287,CC_EC_number:3.1.3.16,PRODUCT:Probable protein phosphatase 2C 11,CC_functional_completeness:fragment,CC_gene:At1g43900,CC_gene:At5g24940,CC_gene:WIN2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035327001~ Probable protein phosphatase 2C 11~ At1g43900~ fragment;original_location=join(1482354..1482592%2C1483557..1483699%2C1483897..1483995%2C1484082..1484240%2C1486177..1486263%2C1486608..1486699%2C1487278..1487349%2C1488133..1488261);owner=coffea | |
| 48578 chr10 manual_curation exon 22994320 22994991 . - . Parent=GSCOCT00035327001 | |
| 48579 chr10 manual_curation exon 23000762 23001271 . - . Parent=GSCOCT00035327001 | |
| 48580 chr10 manual_curation exon 22999655 22999797 . - . Parent=GSCOCT00035327001 | |
| 48581 chr10 manual_curation exon 22999359 22999457 . - . Parent=GSCOCT00035327001 | |
| 48582 chr10 manual_curation exon 22999114 22999272 . - . Parent=GSCOCT00035327001 | |
| 48583 chr10 manual_curation exon 22997091 22997177 . - . Parent=GSCOCT00035327001 | |
| 48584 chr10 manual_curation exon 22996655 22996746 . - . Parent=GSCOCT00035327001 | |
| 48585 chr10 manual_curation exon 22996005 22996076 . - . Parent=GSCOCT00035327001 | |
| 48586 chr10 manual_curation exon 22995072 22995221 . - . Parent=GSCOCT00035327001 | |
| 48587 chr10 manual_curation CDS 23000762 23001000 . - 0 Parent=GSCOCT00035327001 | |
| 48588 chr10 manual_curation CDS 22999655 22999797 . - 2 Parent=GSCOCT00035327001 | |
| 48589 chr10 manual_curation CDS 22999359 22999457 . - 1 Parent=GSCOCT00035327001 | |
| 48590 chr10 manual_curation CDS 22999114 22999272 . - 1 Parent=GSCOCT00035327001 | |
| 48591 chr10 manual_curation CDS 22997091 22997177 . - 1 Parent=GSCOCT00035327001 | |
| 48592 chr10 manual_curation CDS 22996655 22996746 . - 1 Parent=GSCOCT00035327001 | |
| 48593 chr10 manual_curation CDS 22996005 22996076 . - 0 Parent=GSCOCT00035327001 | |
| 48594 chr10 manual_curation CDS 22995093 22995221 . - 0 Parent=GSCOCT00035327001 | |
| 48595 chr10 manual_curation gene 23002245 23002367 . - . ID=GSCOCG00035326001;Name=Cc10_g13210 | |
| 48596 chr10 manual_curation mRNA 23002245 23002367 . - . ID=GSCOCT00035326001;Parent=GSCOCG00035326001;Name=Cc10_g13210 | |
| 48597 chr10 manual_curation polypeptide 23002245 23002367 . - . ID=GSCOCP00035326001;Dbxref=InterPro:IPR001623,InterPro:IPR015609,PANTHER:PTHR11821,PFAM:PF00226,SUPERFAMILY:SSF46565;Derives_from=GSCOCT00035326001;Name=Cc10_g13210;Ontology_term=CC_evidence_code:ISS,GO:0031072,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035326001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1480987..1481109;owner=coffea | |
| 48598 chr10 manual_curation exon 23002245 23002367 . - . Parent=GSCOCT00035326001 | |
| 48599 chr10 manual_curation CDS 23002245 23002367 . - 0 Parent=GSCOCT00035326001 | |
| 48600 chr10 manual_curation gene 23003360 23009756 . + . ID=GSCOCG00035325001;Name=Cc10_g13220 | |
| 48601 chr10 manual_curation mRNA 23003360 23009756 . + . ID=GSCOCT00035325001;Parent=GSCOCG00035325001;Name=Cc10_g13220 | |
| 48602 chr10 manual_curation polypeptide 23003393 23009756 . + . ID=GSCOCP00035325001;Dbxref=GENE3D:G3DSA:1.10.287.110,InterPro:IPR001623,InterPro:IPR015609,PANTHER:PTHR11821,PFAM:PF00226,PROFILE:PS50076,SMART:SM00271,SUPERFAMILY:SSF46565,SwissProt:P39101,SwissProt:P40564,SwissProt:Q8GYX8,TAIR:AT1G21080.3,TAIR:AT1G76700.1,TAIR:AT1G77020.1,TrEMBL:B9H7L9,TrEMBL:B9S2N8,TrEMBL:E0CQK2;Derives_from=GSCOCT00035325001;Name=Cc10_g13220;Ontology_term=CC_evidence_code:ISS,GO:0031072,CC_EC_number:missing_EC_number,PRODUCT:Chaperone protein dnaJ 10,CC_functional_completeness:complete,CC_gene:ATJ10,CC_gene:CAJ1,CC_gene:DJP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035325001~ Chaperone protein dnaJ 10~ ATJ10~ complete;original_location=complement(join(1479875..1479961%2C1478313..1478382%2C1477968..1478076%2C1476942..1477099%2C1476399..1476533%2C1475267..1475425%2C1474990..1475168%2C1474693..1474773%2C1474225..1474365%2C1473598..1473678));owner=coffea | |
| 48603 chr10 manual_curation exon 23009676 23009756 . + . Parent=GSCOCT00035325001 | |
| 48604 chr10 manual_curation exon 23008989 23009129 . + . Parent=GSCOCT00035325001 | |
| 48605 chr10 manual_curation exon 23008581 23008661 . + . Parent=GSCOCT00035325001 | |
| 48606 chr10 manual_curation exon 23008186 23008364 . + . Parent=GSCOCT00035325001 | |
| 48607 chr10 manual_curation exon 23007929 23008087 . + . Parent=GSCOCT00035325001 | |
| 48608 chr10 manual_curation exon 23006821 23006955 . + . Parent=GSCOCT00035325001 | |
| 48609 chr10 manual_curation exon 23006255 23006412 . + . Parent=GSCOCT00035325001 | |
| 48610 chr10 manual_curation exon 23005278 23005386 . + . Parent=GSCOCT00035325001 | |
| 48611 chr10 manual_curation exon 23004972 23005041 . + . Parent=GSCOCT00035325001 | |
| 48612 chr10 manual_curation exon 23003360 23003479 . + . Parent=GSCOCT00035325001 | |
| 48613 chr10 manual_curation CDS 23009676 23009756 . + 0 Parent=GSCOCT00035325001 | |
| 48614 chr10 manual_curation CDS 23008989 23009129 . + 0 Parent=GSCOCT00035325001 | |
| 48615 chr10 manual_curation CDS 23008581 23008661 . + 0 Parent=GSCOCT00035325001 | |
| 48616 chr10 manual_curation CDS 23008186 23008364 . + 1 Parent=GSCOCT00035325001 | |
| 48617 chr10 manual_curation CDS 23007929 23008087 . + 1 Parent=GSCOCT00035325001 | |
| 48618 chr10 manual_curation CDS 23006821 23006955 . + 1 Parent=GSCOCT00035325001 | |
| 48619 chr10 manual_curation CDS 23006255 23006412 . + 2 Parent=GSCOCT00035325001 | |
| 48620 chr10 manual_curation CDS 23005278 23005386 . + 1 Parent=GSCOCT00035325001 | |
| 48621 chr10 manual_curation CDS 23004972 23005041 . + 0 Parent=GSCOCT00035325001 | |
| 48622 chr10 manual_curation CDS 23003393 23003479 . + 0 Parent=GSCOCT00035325001 | |
| 48623 chr10 manual_curation gene 23010772 23015543 . - . ID=GSCOCG00035324001;Name=Cc10_g13230 | |
| 48624 chr10 manual_curation mRNA 23010772 23015543 . - . ID=GSCOCT00035324001;Parent=GSCOCG00035324001;Name=Cc10_g13230 | |
| 48625 chr10 manual_curation polypeptide 23011049 23014857 . - . ID=GSCOCP00035324001;Dbxref=InterPro:IPR006553,SMART:SM00367,SwissProt:O49286,SwissProt:Q96IG2,SwissProt:Q9LPL4,TAIR:AT1G21410.1,TAIR:AT1G77000.1,TAIR:AT5G23340.1,TrEMBL:B9H7L8,TrEMBL:B9S2N9,TrEMBL:E0CQK1;Derives_from=GSCOCT00035324001;Name=Cc10_g13230;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:F-box protein SKP2A,CC_functional_completeness:complete,CC_gene:SKP2A,CC_gene:SKP2B,CC_gene:FBXL20;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035324001~ F-box protein SKP2A~ SKP2A~ complete;original_location=join(1468497..1468747%2C1470307..1470655%2C1470738..1470879%2C1471938..1472305);owner=coffea | |
| 48626 chr10 manual_curation exon 23015388 23015543 . - . Parent=GSCOCT00035324001 | |
| 48627 chr10 manual_curation exon 23014607 23014934 . - . Parent=GSCOCT00035324001 | |
| 48628 chr10 manual_curation exon 23012699 23013047 . - . Parent=GSCOCT00035324001 | |
| 48629 chr10 manual_curation exon 23012475 23012616 . - . Parent=GSCOCT00035324001 | |
| 48630 chr10 manual_curation exon 23010772 23011416 . - . Parent=GSCOCT00035324001 | |
| 48631 chr10 manual_curation CDS 23014607 23014857 . - 0 Parent=GSCOCT00035324001 | |
| 48632 chr10 manual_curation CDS 23012699 23013047 . - 2 Parent=GSCOCT00035324001 | |
| 48633 chr10 manual_curation CDS 23012475 23012616 . - 0 Parent=GSCOCT00035324001 | |
| 48634 chr10 manual_curation CDS 23011049 23011416 . - 1 Parent=GSCOCT00035324001 | |
| 48635 chr10 manual_curation gene 23038770 23042452 . + . ID=GSCOCG00035322001;Name=Cc10_g13240 | |
| 48636 chr10 manual_curation mRNA 23038770 23042452 . + . ID=GSCOCT00035322001;Parent=GSCOCG00035322001;Name=Cc10_g13240 | |
| 48637 chr10 manual_curation polypeptide 23039438 23041820 . + . ID=GSCOCP00035322001;Dbxref=InterPro:IPR002937,InterPro:IPR007526,PFAM:PF01593,PFAM:PF04433,PROFILE:PS50934,SwissProt:Q6YYZ1,SwissProt:Q9CAE3,SwissProt:Q9LID0,TAIR:AT1G62830.1,TAIR:AT3G10390.1,TAIR:AT3G13682.1,TrEMBL:B9I004,TrEMBL:B9T642,TrEMBL:F6H2D7;Derives_from=GSCOCT00035322001;Name=Cc10_g13240;Ontology_term=CC_evidence_code:ISS,CC_EC_number:1.4.3.2,PRODUCT:Lysine-specific histone demethylase 1 homolog 2,CC_functional_completeness:complete,CC_gene:LDL2,CC_gene:FLD,CC_gene:Os08g0143400;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035322001~ Lysine-specific histone demethylase 1 homolog 2~ LDL2~ complete;original_location=complement(join(1442386..1443916%2C1441534..1442270));owner=coffea | |
| 48638 chr10 manual_curation exon 23038770 23038901 . + . Parent=GSCOCT00035322001 | |
| 48639 chr10 manual_curation exon 23041084 23042452 . + . Parent=GSCOCT00035322001 | |
| 48640 chr10 manual_curation exon 23039119 23040968 . + . Parent=GSCOCT00035322001 | |
| 48641 chr10 manual_curation CDS 23041084 23041820 . + 1 Parent=GSCOCT00035322001 | |
| 48642 chr10 manual_curation CDS 23039438 23040968 . + 0 Parent=GSCOCT00035322001 | |
| 48643 chr10 manual_curation gene 23043646 23051514 . - . ID=GSCOCG00035321001;Name=Cc10_g13250 | |
| 48644 chr10 manual_curation mRNA 23043646 23051514 . - . ID=GSCOCT00035321001;Parent=GSCOCG00035321001;Name=Cc10_g13250 | |
| 48645 chr10 manual_curation polypeptide 23043850 23049854 . - . ID=GSCOCP00035321001;Dbxref=InterPro:IPR002912,PFAM:PF01842,TAIR:AT1G69040.2,TAIR:AT1G76990.1,TAIR:AT5G25320.1,TrEMBL:A5AWQ7,TrEMBL:B9S2P0,TrEMBL:F6GZU1;Derives_from=GSCOCT00035321001;Name=Cc10_g13250;Ontology_term=CC_evidence_code:ISS,GO:0008152,GO:0016597,CC_EC_number:missing_EC_number,PRODUCT:ACT domain repeat 3,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035321001~ ACT domain repeat 3~ unknown_gene~ complete;original_location=join(1433500..1433570%2C1433688..1433733%2C1435005..1435119%2C1435823..1435890%2C1436499..1437116%2C1437742..1437846%2C1439184..1439504);owner=coffea | |
| 48646 chr10 manual_curation exon 23051255 23051514 . - . Parent=GSCOCT00035321001 | |
| 48647 chr10 manual_curation exon 23050276 23050408 . - . Parent=GSCOCT00035321001 | |
| 48648 chr10 manual_curation exon 23049784 23049902 . - . Parent=GSCOCT00035321001 | |
| 48649 chr10 manual_curation exon 23049621 23049666 . - . Parent=GSCOCT00035321001 | |
| 48650 chr10 manual_curation exon 23048235 23048349 . - . Parent=GSCOCT00035321001 | |
| 48651 chr10 manual_curation exon 23047464 23047531 . - . Parent=GSCOCT00035321001 | |
| 48652 chr10 manual_curation exon 23046238 23046855 . - . Parent=GSCOCT00035321001 | |
| 48653 chr10 manual_curation exon 23045508 23045612 . - . Parent=GSCOCT00035321001 | |
| 48654 chr10 manual_curation exon 23043646 23044170 . - . Parent=GSCOCT00035321001 | |
| 48655 chr10 manual_curation CDS 23049784 23049854 . - 0 Parent=GSCOCT00035321001 | |
| 48656 chr10 manual_curation CDS 23049621 23049666 . - 2 Parent=GSCOCT00035321001 | |
| 48657 chr10 manual_curation CDS 23048235 23048349 . - 0 Parent=GSCOCT00035321001 | |
| 48658 chr10 manual_curation CDS 23047464 23047531 . - 1 Parent=GSCOCT00035321001 | |
| 48659 chr10 manual_curation CDS 23046238 23046855 . - 0 Parent=GSCOCT00035321001 | |
| 48660 chr10 manual_curation CDS 23045508 23045612 . - 0 Parent=GSCOCT00035321001 | |
| 48661 chr10 manual_curation CDS 23043850 23044170 . - 0 Parent=GSCOCT00035321001 | |
| 48662 chr10 manual_curation gene 23060462 23067369 . - . ID=GSCOCG00035320001;Name=Cc10_g13260 | |
| 48663 chr10 manual_curation mRNA 23060462 23067369 . - . ID=GSCOCT00035320001;Parent=GSCOCG00035320001;Name=Cc10_g13260 | |
| 48664 chr10 manual_curation polypeptide 23060550 23067369 . - . ID=GSCOCP00035320001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008266,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00109,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q9CAL8,SwissProt:Q9LK03,SwissProt:Q9ZUE0,TAIR:AT1G55200.1,TAIR:AT3G13690.1,TAIR:AT5G56790.1,TrEMBL:B8A7A7,TrEMBL:B9EUY7,TrEMBL:I1HU02;Derives_from=GSCOCT00035320001;Name=Cc10_g13260;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0004713,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,CC_EC_number:2.7.11.25,PRODUCT:Putative Protein kinase protein with adenine nucleotide alpha hydrolases-like domain,CC_functional_completeness:complete,CC_gene:PERK2,CC_gene:PERK13,CC_gene:PERK12;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035320001~ Putative Protein kinase protein with adenine nucleotide alpha hydrolases-like domain~ PERK2~ complete;original_location=join(1415985..1416188%2C1417376..1417486%2C1418646..1418743%2C1419647..1419999%2C1420363..1420815%2C1420924..1421084%2C1421903..1421976%2C1422063..1422210%2C1422363..1422512%2C1422727..1422804);owner=coffea | |
| 48665 chr10 manual_curation exon 23067166 23067369 . - . Parent=GSCOCT00035320001 | |
| 48666 chr10 manual_curation exon 23065868 23065978 . - . Parent=GSCOCT00035320001 | |
| 48667 chr10 manual_curation exon 23064611 23064708 . - . Parent=GSCOCT00035320001 | |
| 48668 chr10 manual_curation exon 23063355 23063707 . - . Parent=GSCOCT00035320001 | |
| 48669 chr10 manual_curation exon 23062539 23062991 . - . Parent=GSCOCT00035320001 | |
| 48670 chr10 manual_curation exon 23062270 23062430 . - . Parent=GSCOCT00035320001 | |
| 48671 chr10 manual_curation exon 23061378 23061451 . - . Parent=GSCOCT00035320001 | |
| 48672 chr10 manual_curation exon 23061144 23061291 . - . Parent=GSCOCT00035320001 | |
| 48673 chr10 manual_curation exon 23060842 23060991 . - . Parent=GSCOCT00035320001 | |
| 48674 chr10 manual_curation exon 23060462 23060627 . - . Parent=GSCOCT00035320001 | |
| 48675 chr10 manual_curation CDS 23067166 23067369 . - 0 Parent=GSCOCT00035320001 | |
| 48676 chr10 manual_curation CDS 23065868 23065978 . - 0 Parent=GSCOCT00035320001 | |
| 48677 chr10 manual_curation CDS 23064611 23064708 . - 0 Parent=GSCOCT00035320001 | |
| 48678 chr10 manual_curation CDS 23063355 23063707 . - 2 Parent=GSCOCT00035320001 | |
| 48679 chr10 manual_curation CDS 23062539 23062991 . - 1 Parent=GSCOCT00035320001 | |
| 48680 chr10 manual_curation CDS 23062270 23062430 . - 1 Parent=GSCOCT00035320001 | |
| 48681 chr10 manual_curation CDS 23061378 23061451 . - 0 Parent=GSCOCT00035320001 | |
| 48682 chr10 manual_curation CDS 23061144 23061291 . - 2 Parent=GSCOCT00035320001 | |
| 48683 chr10 manual_curation CDS 23060842 23060991 . - 0 Parent=GSCOCT00035320001 | |
| 48684 chr10 manual_curation CDS 23060550 23060627 . - 0 Parent=GSCOCT00035320001 | |
| 48685 chr10 manual_curation gene 23068554 23075056 . - . ID=GSCOCG00035319001;Name=Cc10_g13270 | |
| 48686 chr10 manual_curation mRNA 23068554 23075056 . - . ID=GSCOCT00035319001;Parent=GSCOCG00035319001;Name=Cc10_g13270 | |
| 48687 chr10 manual_curation polypeptide 23068709 23074760 . - . ID=GSCOCP00035319001;Dbxref=InterPro:IPR001017,PFAM:PF00676,SwissProt:A5A6H9,SwissProt:P11960,SwissProt:Q54M22,TAIR:AT1G21400.1,TAIR:AT5G09300.1,TAIR:AT5G34780.1,TrEMBL:B4F923,TrEMBL:B8BNH6,TrEMBL:I1R4L9;Derives_from=GSCOCT00035319001;Name=Cc10_g13270;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:1.2.4.4,PRODUCT:2-oxoisovalerate dehydrogenase subunit alpha%2C mitochondrial,CC_functional_completeness:modules,CC_gene:bkdA,CC_gene:Bckdha,CC_gene:BCKDHA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035319001~ 2-oxoisovalerate dehydrogenase subunit alpha%2C mitochondrial~ bkdA~ modules;original_location=join(1408594..1408851%2C1411946..1412083%2C1412324..1412506%2C1413078..1413235%2C1413334..1413433%2C1413595..1413706%2C1413925..1414064%2C1414189..1414374%2C1414478..1414645);owner=coffea | |
| 48688 chr10 manual_curation exon 23074503 23075056 . - . Parent=GSCOCT00035319001 | |
| 48689 chr10 manual_curation exon 23071271 23071408 . - . Parent=GSCOCT00035319001 | |
| 48690 chr10 manual_curation exon 23070848 23071030 . - . Parent=GSCOCT00035319001 | |
| 48691 chr10 manual_curation exon 23070119 23070276 . - . Parent=GSCOCT00035319001 | |
| 48692 chr10 manual_curation exon 23069921 23070020 . - . Parent=GSCOCT00035319001 | |
| 48693 chr10 manual_curation exon 23069648 23069759 . - . Parent=GSCOCT00035319001 | |
| 48694 chr10 manual_curation exon 23069290 23069429 . - . Parent=GSCOCT00035319001 | |
| 48695 chr10 manual_curation exon 23068980 23069165 . - . Parent=GSCOCT00035319001 | |
| 48696 chr10 manual_curation exon 23068554 23068876 . - . Parent=GSCOCT00035319001 | |
| 48697 chr10 manual_curation CDS 23074503 23074760 . - 0 Parent=GSCOCT00035319001 | |
| 48698 chr10 manual_curation CDS 23071271 23071408 . - 0 Parent=GSCOCT00035319001 | |
| 48699 chr10 manual_curation CDS 23070848 23071030 . - 0 Parent=GSCOCT00035319001 | |
| 48700 chr10 manual_curation CDS 23070119 23070276 . - 0 Parent=GSCOCT00035319001 | |
| 48701 chr10 manual_curation CDS 23069921 23070020 . - 2 Parent=GSCOCT00035319001 | |
| 48702 chr10 manual_curation CDS 23069648 23069759 . - 0 Parent=GSCOCT00035319001 | |
| 48703 chr10 manual_curation CDS 23069290 23069429 . - 1 Parent=GSCOCT00035319001 | |
| 48704 chr10 manual_curation CDS 23068980 23069165 . - 0 Parent=GSCOCT00035319001 | |
| 48705 chr10 manual_curation CDS 23068709 23068876 . - 0 Parent=GSCOCT00035319001 | |
| 48706 chr10 manual_curation gene 23081163 23082620 . - . ID=GSCOCG00035318001;Name=Cc10_g13280 | |
| 48707 chr10 manual_curation mRNA 23081163 23082620 . - . ID=GSCOCT00035318001;Parent=GSCOCG00035318001;Name=Cc10_g13280 | |
| 48708 chr10 manual_curation polypeptide 23081907 23082620 . - . ID=GSCOCP00035318001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q9LP03,SwissProt:Q9STE1,SwissProt:Q9ZUW3,TAIR:AT1G43980.1,TAIR:AT2G27610.1,TAIR:AT4G21300.1,TIGRFAMs:TIGR00756,TrEMBL:A5C139,TrEMBL:B9H7L3,TrEMBL:F6GZT9;Derives_from=GSCOCT00035318001;Name=Cc10_g13280;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Pentatricopeptide repeat-containing protein At1g43980%2C mitochondrial,CC_functional_completeness:fragment,CC_gene:PCMP-E58,CC_gene:PCMP-H60,CC_gene:PCMP-E36;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035318001~ Putative Pentatricopeptide repeat-containing protein At1g43980%2C mitochondrial~ PCMP-E58~ fragment;original_location=1400734..1401447;owner=coffea | |
| 48709 chr10 manual_curation exon 23081163 23082620 . - . Parent=GSCOCT00035318001 | |
| 48710 chr10 manual_curation CDS 23081907 23082620 . - 0 Parent=GSCOCT00035318001 | |
| 48711 chr10 manual_curation gene 23082783 23083799 . - . ID=GSCOCG00035317001;Name=Cc10_g13290 | |
| 48712 chr10 manual_curation mRNA 23082783 23083799 . - . ID=GSCOCT00035317001;Parent=GSCOCG00035317001;Name=Cc10_g13290 | |
| 48713 chr10 manual_curation polypeptide 23082836 23083799 . - . ID=GSCOCP00035317001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q9LP03,SwissProt:Q9SHZ8,SwissProt:Q9SIT7,TAIR:AT1G43980.1,TAIR:AT2G13600.1,TAIR:AT2G22070.1,TIGRFAMs:TIGR00756,TrEMBL:B9H7L3,TrEMBL:I1JYZ6,TrEMBL:I1KAG9;Derives_from=GSCOCT00035317001;Name=Cc10_g13290;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Pentatricopeptide repeat-containing protein At1g43980%2C mitochondrial,CC_functional_completeness:complete,CC_gene:PCMP-E58,CC_gene:PCMP-H41,CC_gene:PCMP-E76;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035317001~ Putative Pentatricopeptide repeat-containing protein At1g43980%2C mitochondrial~ PCMP-E58~ complete;original_location=join(1399555..1400356%2C1400451..1400518);owner=coffea | |
| 48714 chr10 manual_curation exon 23082998 23083799 . - . Parent=GSCOCT00035317001 | |
| 48715 chr10 manual_curation exon 23082783 23082903 . - . Parent=GSCOCT00035317001 | |
| 48716 chr10 manual_curation CDS 23082998 23083799 . - 0 Parent=GSCOCT00035317001 | |
| 48717 chr10 manual_curation CDS 23082836 23082903 . - 1 Parent=GSCOCT00035317001 | |
| 48718 chr10 manual_curation gene 23084679 23088777 . - . ID=GSCOCG00035316001;Name=Cc10_g13300 | |
| 48719 chr10 manual_curation mRNA 23084679 23088777 . - . ID=GSCOCT00035316001;Parent=GSCOCG00035316001;Name=Cc10_g13300 | |
| 48720 chr10 manual_curation polypeptide 23086729 23088777 . - . ID=GSCOCP00035316001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:O49287,SwissProt:Q9SHZ8,SwissProt:Q9SIT7,TAIR:AT1G77010.1,TAIR:AT2G13600.1,TAIR:AT2G22070.1,TIGRFAMs:TIGR00756,TrEMBL:B9GTQ2,TrEMBL:B9S2P6,TrEMBL:F6GZT8;Derives_from=GSCOCT00035316001;Name=Cc10_g13300;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative pentatricopeptide repeat-containing protein At1g77010%2C mitochondrial,CC_functional_completeness:complete,CC_gene:PCMP-E5,CC_gene:PCMP-E76,CC_gene:PCMP-H41;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035316001~ Putative pentatricopeptide repeat-containing protein At1g77010%2C mitochondrial~ PCMP-E5~ complete;original_location=1394577..1396625;owner=coffea | |
| 48721 chr10 manual_curation exon 23086322 23086391 . - . Parent=GSCOCT00035316001 | |
| 48722 chr10 manual_curation exon 23086145 23086219 . - . Parent=GSCOCT00035316001 | |
| 48723 chr10 manual_curation exon 23085347 23085773 . - . Parent=GSCOCT00035316001 | |
| 48724 chr10 manual_curation exon 23084679 23085172 . - . Parent=GSCOCT00035316001 | |
| 48725 chr10 manual_curation exon 23086698 23088777 . - . Parent=GSCOCT00035316001 | |
| 48726 chr10 manual_curation CDS 23086729 23088777 . - 0 Parent=GSCOCT00035316001 | |
| 48727 chr10 manual_curation gene 23097015 23099190 . - . ID=GSCOCG00035315001;Name=Cc10_g13310 | |
| 48728 chr10 manual_curation mRNA 23097015 23099190 . - . ID=GSCOCT00035315001;Parent=GSCOCG00035315001;Name=Cc10_g13310 | |
| 48729 chr10 manual_curation polypeptide 23097064 23099190 . - . ID=GSCOCP00035315001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q9LFI1,SwissProt:Q9LFL5,SwissProt:Q9LRV2,TAIR:AT3G26540.1,TAIR:AT3G53360.1,TAIR:AT5G16860.1,TIGRFAMs:TIGR00756,TrEMBL:B9GTQ3,TrEMBL:B9SVS3,TrEMBL:F6GZT6;Derives_from=GSCOCT00035315001;Name=Cc10_g13310;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At3g26540,CC_functional_completeness:complete,CC_gene:PCMP-A5,CC_gene:PCMP-H92,CC_gene:PCMP-E86;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035315001~ Pentatricopeptide repeat-containing protein At3g26540~ PCMP-A5~ complete;original_location=1384164..1386290;owner=coffea | |
| 48730 chr10 manual_curation exon 23097015 23099190 . - . Parent=GSCOCT00035315001 | |
| 48731 chr10 manual_curation CDS 23097064 23099190 . - 0 Parent=GSCOCT00035315001 | |
| 48732 chr10 manual_curation gene 23116228 23120673 . + . ID=GSCOCG00035313001;Name=Cc10_g13320 | |
| 48733 chr10 manual_curation mRNA 23116228 23120673 . + . ID=GSCOCT00035313001;Parent=GSCOCG00035313001;Name=Cc10_g13320 | |
| 48734 chr10 manual_curation polypeptide 23116228 23120673 . + . ID=GSCOCP00035313001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,InterPro:IPR021929,PFAM:PF00931,PFAM:PF12061,PRINTS:PR00364,SwissProt:Q6L3Z4,SwissProt:Q6L3Z7,SwissProt:Q6L403,TAIR:AT5G35450.1,TAIR:AT5G43470.1,TAIR:AT5G48620.1,TrEMBL:Q96485,TrEMBL:Q9LLD0,TrEMBL:Q9LLD4;Derives_from=GSCOCT00035313001;Name=Cc10_g13320;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative Disease resistance protein (CC-NBS-LRR class) family,CC_functional_completeness:modules,CC_gene:R1B-17,CC_gene:R1B-14,CC_gene:R1B-12;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035313001~ Putative Disease resistance protein (CC-NBS-LRR class) family~ R1B-17~ modules;original_location=complement(1362681..1367126);owner=coffea | |
| 48735 chr10 manual_curation exon 23116228 23120673 . + . Parent=GSCOCT00035313001 | |
| 48736 chr10 manual_curation CDS 23116228 23120673 . + 0 Parent=GSCOCT00035313001 | |
| 48737 chr10 manual_curation gene 23125939 23127303 . + . ID=GSCOCG00035311001;Name=Cc10_g13330 | |
| 48738 chr10 manual_curation mRNA 23125939 23127303 . + . ID=GSCOCT00035311001;Parent=GSCOCG00035311001;Name=Cc10_g13330 | |
| 48739 chr10 manual_curation polypeptide 23125939 23127303 . + . ID=GSCOCP00035311001;Dbxref=InterPro:IPR003480,PFAM:PF02458,SwissProt:Q9FF86,SwissProt:Q9FI78,SwissProt:Q9SND9,TAIR:AT5G07850.1,TAIR:AT5G07870.1,TAIR:AT5G42830.1,TrEMBL:A5APP6,TrEMBL:B9MVT8,TrEMBL:F6H1B0;Derives_from=GSCOCT00035311001;Name=Cc10_g13330;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.3.1.144,PRODUCT:Putative Uncharacterized acetyltransferase At3g50280,CC_functional_completeness:complete,CC_gene:At3g50280,CC_gene:DCR,CC_gene:HCT;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035311001~ Putative Uncharacterized acetyltransferase At3g50280~ At3g50280~ complete;original_location=complement(1356051..1357415);owner=coffea | |
| 48740 chr10 manual_curation exon 23125939 23127303 . + . Parent=GSCOCT00035311001 | |
| 48741 chr10 manual_curation CDS 23125939 23127303 . + 0 Parent=GSCOCT00035311001 | |
| 48742 chr10 manual_curation gene 23136795 23138162 . + . ID=GSCOCG00035310001;Name=Cc10_g13340 | |
| 48743 chr10 manual_curation mRNA 23136795 23138162 . + . ID=GSCOCT00035310001;Parent=GSCOCG00035310001;Name=Cc10_g13340 | |
| 48744 chr10 manual_curation polypeptide 23136795 23138162 . + . ID=GSCOCP00035310001;Dbxref=InterPro:IPR003480,PFAM:PF02458,SwissProt:Q9FF86,SwissProt:Q9FI78,SwissProt:Q9SND9,TAIR:AT5G07850.1,TAIR:AT5G07870.1,TAIR:AT5G42830.1,TrEMBL:A5APP6,TrEMBL:B9MVT9,TrEMBL:F6H1B0;Derives_from=GSCOCT00035310001;Name=Cc10_g13340;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.3.1.144,PRODUCT:Putative Uncharacterized acetyltransferase At3g50280,CC_functional_completeness:complete,CC_gene:At3g50280,CC_gene:DCR,CC_gene:HCT;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035310001~ Putative Uncharacterized acetyltransferase At3g50280~ At3g50280~ complete;original_location=complement(1345192..1346559);owner=coffea | |
| 48745 chr10 manual_curation exon 23136795 23138162 . + . Parent=GSCOCT00035310001 | |
| 48746 chr10 manual_curation CDS 23136795 23138162 . + 0 Parent=GSCOCT00035310001 | |
| 48747 chr10 manual_curation gene 23151397 23153718 . + . ID=GSCOCG00035308001;Name=Cc10_g13350 | |
| 48748 chr10 manual_curation mRNA 23151397 23153718 . + . ID=GSCOCT00035308001;Parent=GSCOCG00035308001;Name=Cc10_g13350 | |
| 48749 chr10 manual_curation polypeptide 23151546 23153395 . + . ID=GSCOCP00035308001;Dbxref=TAIR:AT1G21390.1,TAIR:AT1G76980.1,TrEMBL:A5C140,TrEMBL:B9H7L2,TrEMBL:F6GZT7;Derives_from=GSCOCT00035308001;Name=Cc10_g13350;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035308001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=complement(join(1330988..1331808%2C1329959..1330028));owner=coffea | |
| 48750 chr10 manual_curation exon 23153326 23153718 . + . Parent=GSCOCT00035308001 | |
| 48751 chr10 manual_curation exon 23151397 23152366 . + . Parent=GSCOCT00035308001 | |
| 48752 chr10 manual_curation CDS 23153326 23153395 . + 2 Parent=GSCOCT00035308001 | |
| 48753 chr10 manual_curation CDS 23151546 23152366 . + 0 Parent=GSCOCT00035308001 | |
| 48754 chr10 manual_curation gene 23217252 23222146 . + . ID=GSCOCG00035305001;Name=Cc10_g13360 | |
| 48755 chr10 manual_curation mRNA 23217252 23222146 . + . ID=GSCOCT00035305001;Parent=GSCOCG00035305001;Name=Cc10_g13360 | |
| 48756 chr10 manual_curation polypeptide 23217452 23221923 . + . ID=GSCOCP00035305001;Derives_from=GSCOCT00035305001;Name=Cc10_g13360;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035305001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1265892..1265902%2C1265640..1265695%2C1265468..1265534%2C1264725..1264757%2C1263379..1263417%2C1262360..1262401%2C1262125..1262157%2C1261941..1261980%2C1261431..1261535));owner=coffea | |
| 48757 chr10 manual_curation exon 23221819 23222146 . + . Parent=GSCOCT00035305001 | |
| 48758 chr10 manual_curation exon 23221374 23221413 . + . Parent=GSCOCT00035305001 | |
| 48759 chr10 manual_curation exon 23221197 23221229 . + . Parent=GSCOCT00035305001 | |
| 48760 chr10 manual_curation exon 23220953 23220994 . + . Parent=GSCOCT00035305001 | |
| 48761 chr10 manual_curation exon 23219937 23219975 . + . Parent=GSCOCT00035305001 | |
| 48762 chr10 manual_curation exon 23218597 23218629 . + . Parent=GSCOCT00035305001 | |
| 48763 chr10 manual_curation exon 23217820 23217886 . + . Parent=GSCOCT00035305001 | |
| 48764 chr10 manual_curation exon 23217659 23217714 . + . Parent=GSCOCT00035305001 | |
| 48765 chr10 manual_curation exon 23217252 23217462 . + . Parent=GSCOCT00035305001 | |
| 48766 chr10 manual_curation CDS 23221819 23221923 . + 0 Parent=GSCOCT00035305001 | |
| 48767 chr10 manual_curation CDS 23221374 23221413 . + 2 Parent=GSCOCT00035305001 | |
| 48768 chr10 manual_curation CDS 23221197 23221229 . + 2 Parent=GSCOCT00035305001 | |
| 48769 chr10 manual_curation CDS 23220953 23220994 . + 2 Parent=GSCOCT00035305001 | |
| 48770 chr10 manual_curation CDS 23219937 23219975 . + 2 Parent=GSCOCT00035305001 | |
| 48771 chr10 manual_curation CDS 23218597 23218629 . + 2 Parent=GSCOCT00035305001 | |
| 48772 chr10 manual_curation CDS 23217820 23217886 . + 1 Parent=GSCOCT00035305001 | |
| 48773 chr10 manual_curation CDS 23217659 23217714 . + 2 Parent=GSCOCT00035305001 | |
| 48774 chr10 manual_curation CDS 23217452 23217462 . + 0 Parent=GSCOCT00035305001 | |
| 48775 chr10 manual_curation gene 23246171 23246851 . - . ID=GSCOCG00035301001;Name=Cc10_g13370 | |
| 48776 chr10 manual_curation mRNA 23246171 23246851 . - . ID=GSCOCT00035301001;Parent=GSCOCG00035301001;Name=Cc10_g13370 | |
| 48777 chr10 manual_curation polypeptide 23246171 23246851 . - . ID=GSCOCP00035301001;Dbxref=InterPro:IPR018934,PFAM:PF01163,SwissProt:Q54VD8,SwissProt:Q922Q2,SwissProt:Q9BRS2,TAIR:AT2G24990.1,TAIR:AT5G37350.1,TrEMBL:D7SGY7,TrEMBL:I1L6M2,TrEMBL:Q75XU7;Derives_from=GSCOCT00035301001;Name=Cc10_g13370;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005524,CC_EC_number:2.7.11.1,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:Riok1,CC_gene:rio1,CC_gene:RIOK1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035301001~ Hypothetical protein~ Riok1~ missing_functional_completeness;original_location=join(1236503..1236736%2C1236810..1236902%2C1236998..1237183);owner=coffea | |
| 48778 chr10 manual_curation exon 23246618 23246851 . - . Parent=GSCOCT00035301001 | |
| 48779 chr10 manual_curation exon 23246452 23246544 . - . Parent=GSCOCT00035301001 | |
| 48780 chr10 manual_curation exon 23246171 23246356 . - . Parent=GSCOCT00035301001 | |
| 48781 chr10 manual_curation CDS 23246618 23246851 . - 0 Parent=GSCOCT00035301001 | |
| 48782 chr10 manual_curation CDS 23246452 23246544 . - 0 Parent=GSCOCT00035301001 | |
| 48783 chr10 manual_curation CDS 23246171 23246356 . - 0 Parent=GSCOCT00035301001 | |
| 48784 chr10 manual_curation gene 23250854 23251385 . - . ID=GSCOCG00035300001;Name=Cc10_g13380 | |
| 48785 chr10 manual_curation mRNA 23250854 23251385 . - . ID=GSCOCT00035300001;Parent=GSCOCG00035300001;Name=Cc10_g13380 | |
| 48786 chr10 manual_curation polypeptide 23250854 23251033 . - . ID=GSCOCP00035300001;Derives_from=GSCOCT00035300001;Name=Cc10_g13380;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035300001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1232321..1232500;owner=coffea | |
| 48787 chr10 manual_curation exon 23251293 23251385 . - . Parent=GSCOCT00035300001 | |
| 48788 chr10 manual_curation exon 23250854 23251212 . - . Parent=GSCOCT00035300001 | |
| 48789 chr10 manual_curation CDS 23250854 23251033 . - 0 Parent=GSCOCT00035300001 | |
| 48790 chr10 manual_curation gene 23328705 23340854 . + . ID=GSCOCG00035299001;Name=Cc10_g13390 | |
| 48791 chr10 manual_curation mRNA 23328705 23340854 . + . ID=GSCOCT00035299001;Parent=GSCOCG00035299001;Name=Cc10_g13390 | |
| 48792 chr10 manual_curation polypeptide 23328766 23340545 . + . ID=GSCOCP00035299001;Derives_from=GSCOCT00035299001;Name=Cc10_g13390;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035299001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1154578..1154588%2C1147469..1147527%2C1147253..1147310%2C1146693..1146716%2C1146253..1146306%2C1144585..1144626%2C1144338..1144370%2C1144087..1144128%2C1143927..1143965%2C1143778..1143794%2C1142809..1142870));owner=coffea | |
| 48793 chr10 manual_curation exon 23340484 23340854 . + . Parent=GSCOCT00035299001 | |
| 48794 chr10 manual_curation exon 23339560 23339576 . + . Parent=GSCOCT00035299001 | |
| 48795 chr10 manual_curation exon 23339389 23339427 . + . Parent=GSCOCT00035299001 | |
| 48796 chr10 manual_curation exon 23339226 23339267 . + . Parent=GSCOCT00035299001 | |
| 48797 chr10 manual_curation exon 23338984 23339016 . + . Parent=GSCOCT00035299001 | |
| 48798 chr10 manual_curation exon 23338728 23338769 . + . Parent=GSCOCT00035299001 | |
| 48799 chr10 manual_curation exon 23337048 23337101 . + . Parent=GSCOCT00035299001 | |
| 48800 chr10 manual_curation exon 23336638 23336661 . + . Parent=GSCOCT00035299001 | |
| 48801 chr10 manual_curation exon 23336044 23336101 . + . Parent=GSCOCT00035299001 | |
| 48802 chr10 manual_curation exon 23335827 23335885 . + . Parent=GSCOCT00035299001 | |
| 48803 chr10 manual_curation exon 23328705 23328776 . + . Parent=GSCOCT00035299001 | |
| 48804 chr10 manual_curation CDS 23340484 23340545 . + 1 Parent=GSCOCT00035299001 | |
| 48805 chr10 manual_curation CDS 23339560 23339576 . + 2 Parent=GSCOCT00035299001 | |
| 48806 chr10 manual_curation CDS 23339389 23339427 . + 2 Parent=GSCOCT00035299001 | |
| 48807 chr10 manual_curation CDS 23339226 23339267 . + 2 Parent=GSCOCT00035299001 | |
| 48808 chr10 manual_curation CDS 23338984 23339016 . + 2 Parent=GSCOCT00035299001 | |
| 48809 chr10 manual_curation CDS 23338728 23338769 . + 2 Parent=GSCOCT00035299001 | |
| 48810 chr10 manual_curation CDS 23337048 23337101 . + 2 Parent=GSCOCT00035299001 | |
| 48811 chr10 manual_curation CDS 23336638 23336661 . + 2 Parent=GSCOCT00035299001 | |
| 48812 chr10 manual_curation CDS 23336044 23336101 . + 1 Parent=GSCOCT00035299001 | |
| 48813 chr10 manual_curation CDS 23335827 23335885 . + 2 Parent=GSCOCT00035299001 | |
| 48814 chr10 manual_curation CDS 23328766 23328776 . + 0 Parent=GSCOCT00035299001 | |
| 48815 chr10 manual_curation gene 23341318 23350973 . - . ID=GSCOCG00035298001;Name=Cc10_g13400 | |
| 48816 chr10 manual_curation mRNA 23341318 23350973 . - . ID=GSCOCT00035298001;Parent=GSCOCG00035298001;Name=Cc10_g13400 | |
| 48817 chr10 manual_curation polypeptide 23341541 23350423 . - . ID=GSCOCP00035298001;Dbxref=InterPro:IPR000687,InterPro:IPR011009,InterPro:IPR017407,InterPro:IPR018934,InterPro:IPR018935,PFAM:PF01163,PIR:PIRSF038147,PROSITE:PS01245,SMART:SM00090,SUPERFAMILY:SSF56112,SwissProt:Q54VD8,SwissProt:Q922Q2,SwissProt:Q9BRS2,TAIR:AT2G24990.1,TAIR:AT5G37350.1,TrEMBL:B9IFB5,TrEMBL:D7SGY7,TrEMBL:Q75XU7;Derives_from=GSCOCT00035298001;Name=Cc10_g13400;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004674,GO:0005524,CC_EC_number:2.7.11.1,PRODUCT:Putative Serine/threonine-protein kinase RIO1,CC_functional_completeness:complete,CC_gene:RIOK1,CC_gene:Riok1,CC_gene:rio1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035298001~ Putative Serine/threonine-protein kinase RIO1~ RIOK1~ complete;original_location=join(1132931..1133212%2C1133861..1133989%2C1134367..1134459%2C1134607..1134686%2C1135184..1135297%2C1138243..1138316%2C1139202..1139278%2C1140373..1140456%2C1140529..1140621%2C1140719..1140826%2C1140904..1140978%2C1141361..1141813);owner=coffea | |
| 48818 chr10 manual_curation exon 23350142 23350973 . - . Parent=GSCOCT00035298001 | |
| 48819 chr10 manual_curation exon 23349365 23349493 . - . Parent=GSCOCT00035298001 | |
| 48820 chr10 manual_curation exon 23348895 23348987 . - . Parent=GSCOCT00035298001 | |
| 48821 chr10 manual_curation exon 23348668 23348747 . - . Parent=GSCOCT00035298001 | |
| 48822 chr10 manual_curation exon 23348057 23348170 . - . Parent=GSCOCT00035298001 | |
| 48823 chr10 manual_curation exon 23345038 23345111 . - . Parent=GSCOCT00035298001 | |
| 48824 chr10 manual_curation exon 23344076 23344152 . - . Parent=GSCOCT00035298001 | |
| 48825 chr10 manual_curation exon 23342898 23342981 . - . Parent=GSCOCT00035298001 | |
| 48826 chr10 manual_curation exon 23342733 23342825 . - . Parent=GSCOCT00035298001 | |
| 48827 chr10 manual_curation exon 23342528 23342635 . - . Parent=GSCOCT00035298001 | |
| 48828 chr10 manual_curation exon 23342376 23342450 . - . Parent=GSCOCT00035298001 | |
| 48829 chr10 manual_curation exon 23341318 23341993 . - . Parent=GSCOCT00035298001 | |
| 48830 chr10 manual_curation CDS 23350142 23350423 . - 0 Parent=GSCOCT00035298001 | |
| 48831 chr10 manual_curation CDS 23349365 23349493 . - 0 Parent=GSCOCT00035298001 | |
| 48832 chr10 manual_curation CDS 23348895 23348987 . - 0 Parent=GSCOCT00035298001 | |
| 48833 chr10 manual_curation CDS 23348668 23348747 . - 0 Parent=GSCOCT00035298001 | |
| 48834 chr10 manual_curation CDS 23348057 23348170 . - 2 Parent=GSCOCT00035298001 | |
| 48835 chr10 manual_curation CDS 23345038 23345111 . - 2 Parent=GSCOCT00035298001 | |
| 48836 chr10 manual_curation CDS 23344076 23344152 . - 1 Parent=GSCOCT00035298001 | |
| 48837 chr10 manual_curation CDS 23342898 23342981 . - 0 Parent=GSCOCT00035298001 | |
| 48838 chr10 manual_curation CDS 23342733 23342825 . - 0 Parent=GSCOCT00035298001 | |
| 48839 chr10 manual_curation CDS 23342528 23342635 . - 0 Parent=GSCOCT00035298001 | |
| 48840 chr10 manual_curation CDS 23342376 23342450 . - 0 Parent=GSCOCT00035298001 | |
| 48841 chr10 manual_curation CDS 23341541 23341993 . - 0 Parent=GSCOCT00035298001 | |
| 48842 chr10 manual_curation gene 23358774 23366704 . + . ID=GSCOCG00035296001;Name=Cc10_g13410 | |
| 48843 chr10 manual_curation mRNA 23358774 23366704 . + . ID=GSCOCT00035296001;Parent=GSCOCG00035296001;Name=Cc10_g13410 | |
| 48844 chr10 manual_curation polypeptide 23359914 23366704 . + . ID=GSCOCP00035296001;Dbxref=GENE3D:G3DSA:1.25.40.90,InterPro:IPR002014,InterPro:IPR004152,InterPro:IPR008942,InterPro:IPR018205,PFAM:PF00790,PFAM:PF03127,PROFILE:PS50179,PROFILE:PS50909,SMART:SM00288,SUPERFAMILY:SSF48464,SwissProt:Q5SRX1,SwissProt:Q68FJ8,SwissProt:Q6ZVM7,TAIR:AT1G21380.1,TAIR:AT1G76970.1,TAIR:AT4G32760.2,TrEMBL:B9S2Q1,TrEMBL:F6H0F0,TrEMBL:I1JZ00;Derives_from=GSCOCT00035296001;Name=Cc10_g13410;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0006886,CC_EC_number:missing_EC_number,PRODUCT:Target of Myb protein 1,CC_functional_completeness:complete,CC_gene:tom1l2,CC_gene:Tom1l2,CC_gene:TOM1L2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035296001~ Target of Myb protein 1~ tom1l2~ complete;original_location=complement(join(1123331..1123440%2C1122425..1122503%2C1121479..1121577%2C1121264..1121377%2C1120564..1120709%2C1120142..1120223%2C1118937..1119022%2C1118637..1118828%2C1116650..1117319));owner=coffea | |
| 48845 chr10 manual_curation exon 23366035 23366704 . + . Parent=GSCOCT00035296001 | |
| 48846 chr10 manual_curation exon 23364526 23364717 . + . Parent=GSCOCT00035296001 | |
| 48847 chr10 manual_curation exon 23364332 23364417 . + . Parent=GSCOCT00035296001 | |
| 48848 chr10 manual_curation exon 23363131 23363212 . + . Parent=GSCOCT00035296001 | |
| 48849 chr10 manual_curation exon 23362645 23362790 . + . Parent=GSCOCT00035296001 | |
| 48850 chr10 manual_curation exon 23361977 23362090 . + . Parent=GSCOCT00035296001 | |
| 48851 chr10 manual_curation exon 23361777 23361875 . + . Parent=GSCOCT00035296001 | |
| 48852 chr10 manual_curation exon 23360851 23360929 . + . Parent=GSCOCT00035296001 | |
| 48853 chr10 manual_curation exon 23358774 23360023 . + . Parent=GSCOCT00035296001 | |
| 48854 chr10 manual_curation CDS 23366035 23366704 . + 2 Parent=GSCOCT00035296001 | |
| 48855 chr10 manual_curation CDS 23364526 23364717 . + 2 Parent=GSCOCT00035296001 | |
| 48856 chr10 manual_curation CDS 23364332 23364417 . + 0 Parent=GSCOCT00035296001 | |
| 48857 chr10 manual_curation CDS 23363131 23363212 . + 2 Parent=GSCOCT00035296001 | |
| 48858 chr10 manual_curation CDS 23362645 23362790 . + 0 Parent=GSCOCT00035296001 | |
| 48859 chr10 manual_curation CDS 23361977 23362090 . + 0 Parent=GSCOCT00035296001 | |
| 48860 chr10 manual_curation CDS 23361777 23361875 . + 0 Parent=GSCOCT00035296001 | |
| 48861 chr10 manual_curation CDS 23360851 23360929 . + 2 Parent=GSCOCT00035296001 | |
| 48862 chr10 manual_curation CDS 23359914 23360023 . + 0 Parent=GSCOCT00035296001 | |
| 48863 chr10 manual_curation gene 23366799 23367104 . - . ID=GSCOCG00035295001;Name=Cc10_g13420 | |
| 48864 chr10 manual_curation mRNA 23366799 23367104 . - . ID=GSCOCT00035295001;Parent=GSCOCG00035295001;Name=Cc10_g13420 | |
| 48865 chr10 manual_curation polypeptide 23366799 23367104 . - . ID=GSCOCP00035295001;Derives_from=GSCOCT00035295001;Name=Cc10_g13420;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035295001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1116250..1116555;owner=coffea | |
| 48866 chr10 manual_curation exon 23366799 23367104 . - . Parent=GSCOCT00035295001 | |
| 48867 chr10 manual_curation CDS 23366799 23367104 . - 0 Parent=GSCOCT00035295001 | |
| 48868 chr10 manual_curation gene 23418021 23418512 . + . ID=GSCOCG00035293001;Name=Cc10_g13430 | |
| 48869 chr10 manual_curation mRNA 23418021 23418512 . + . ID=GSCOCT00035293001;Parent=GSCOCG00035293001;Name=Cc10_g13430 | |
| 48870 chr10 manual_curation polypeptide 23418021 23418512 . + . ID=GSCOCP00035293001;Derives_from=GSCOCT00035293001;Name=Cc10_g13430;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035293001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1065045..1065333%2C1064842..1064915));owner=coffea | |
| 48871 chr10 manual_curation exon 23418439 23418512 . + . Parent=GSCOCT00035293001 | |
| 48872 chr10 manual_curation exon 23418021 23418309 . + . Parent=GSCOCT00035293001 | |
| 48873 chr10 manual_curation CDS 23418439 23418512 . + 1 Parent=GSCOCT00035293001 | |
| 48874 chr10 manual_curation CDS 23418021 23418309 . + 0 Parent=GSCOCT00035293001 | |
| 48875 chr10 manual_curation gene 23444798 23445727 . - . ID=GSCOCG00035292001;Name=Cc10_g13440 | |
| 48876 chr10 manual_curation mRNA 23444798 23445727 . - . ID=GSCOCT00035292001;Parent=GSCOCG00035292001;Name=Cc10_g13440 | |
| 48877 chr10 manual_curation polypeptide 23445149 23445727 . - . ID=GSCOCP00035292001;Dbxref=GENE3D:G3DSA:1.10.110.10,InterPro:IPR000528,InterPro:IPR003612,InterPro:IPR013770,InterPro:IPR016140,PRINTS:PR00382,SMART:SM00499,SUPERFAMILY:SSF47699,TrEMBL:F1BX25,TrEMBL:F1BX27,TrEMBL:F1BX29;Derives_from=GSCOCT00035292001;Name=Cc10_g13440;Ontology_term=CC_evidence_code:ISS,GO:0006869,GO:0008289,CC_EC_number:missing_EC_number,PRODUCT:Putative Non-specific lipid-transfer protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035292001~ Putative Non-specific lipid-transfer protein~ unknown_gene~ modules;original_location=join(1037627..1037982%2C1038082..1038205);owner=coffea | |
| 48878 chr10 manual_curation exon 23444798 23445007 . - . Parent=GSCOCT00035292001 | |
| 48879 chr10 manual_curation exon 23445372 23445727 . - . Parent=GSCOCT00035292001 | |
| 48880 chr10 manual_curation exon 23445143 23445272 . - . Parent=GSCOCT00035292001 | |
| 48881 chr10 manual_curation CDS 23445372 23445727 . - 0 Parent=GSCOCT00035292001 | |
| 48882 chr10 manual_curation CDS 23445149 23445272 . - 2 Parent=GSCOCT00035292001 | |
| 48883 chr10 manual_curation gene 23454894 23457633 . - . ID=GSCOCG00035291001;Name=Cc10_g13450 | |
| 48884 chr10 manual_curation mRNA 23454894 23457633 . - . ID=GSCOCT00035291001;Parent=GSCOCG00035291001;Name=Cc10_g13450 | |
| 48885 chr10 manual_curation polypeptide 23455126 23457578 . - . ID=GSCOCP00035291001;Dbxref=TAIR:AT1G44000.1,TAIR:AT4G11910.1,TAIR:AT4G22920.1,TrEMBL:A5BU42,TrEMBL:B9S2Q3,TrEMBL:E0CQY6;Derives_from=GSCOCT00035291001;Name=Cc10_g13450;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035291001~ unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11911.1)%3B Has 216 Blast hits to 212 proteins in 76 species: Archae - 0%3B Bacteria - 96%3B Metazoa - 0%3B Fungi - 0%3B Plants - 118%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(1025776..1025958%2C1027041..1027217%2C1027474..1027632%2C1027844..1027990%2C1028109..1028228);owner=coffea | |
| 48886 chr10 manual_curation exon 23457396 23457633 . - . Parent=GSCOCT00035291001 | |
| 48887 chr10 manual_curation exon 23456137 23456313 . - . Parent=GSCOCT00035291001 | |
| 48888 chr10 manual_curation exon 23455722 23455880 . - . Parent=GSCOCT00035291001 | |
| 48889 chr10 manual_curation exon 23455364 23455510 . - . Parent=GSCOCT00035291001 | |
| 48890 chr10 manual_curation exon 23454894 23455245 . - . Parent=GSCOCT00035291001 | |
| 48891 chr10 manual_curation CDS 23457396 23457578 . - 0 Parent=GSCOCT00035291001 | |
| 48892 chr10 manual_curation CDS 23456137 23456313 . - 0 Parent=GSCOCT00035291001 | |
| 48893 chr10 manual_curation CDS 23455722 23455880 . - 0 Parent=GSCOCT00035291001 | |
| 48894 chr10 manual_curation CDS 23455364 23455510 . - 0 Parent=GSCOCT00035291001 | |
| 48895 chr10 manual_curation CDS 23455126 23455245 . - 0 Parent=GSCOCT00035291001 | |
| 48896 chr10 manual_curation gene 23498613 23499554 . - . ID=GSCOCG00035289001;Name=Cc10_g13460 | |
| 48897 chr10 manual_curation mRNA 23498613 23499554 . - . ID=GSCOCT00035289001;Parent=GSCOCG00035289001;Name=Cc10_g13460 | |
| 48898 chr10 manual_curation polypeptide 23498613 23499554 . - . ID=GSCOCP00035289001;Dbxref=TAIR:AT1G21510.1,TrEMBL:A9PBA8,TrEMBL:B9S2R2,TrEMBL:E0CQZ7;Derives_from=GSCOCT00035289001;Name=Cc10_g13460;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035289001~ Putative unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: N-terminal protein myristoylation%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: cotyledon%3B Has 380 Blast hits to 286 proteins in 63 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 254%3B Fungi - 44%3B Plants - 13%3B Viruses - 5%3B Other Eukaryotes - 58 (source: NCBI BLink).~ unknown_gene~ complete;original_location=983800..984741;owner=coffea | |
| 48899 chr10 manual_curation exon 23498613 23499554 . - . Parent=GSCOCT00035289001 | |
| 48900 chr10 manual_curation CDS 23498613 23499554 . - 0 Parent=GSCOCT00035289001 | |
| 48901 chr10 manual_curation gene 23505309 23507552 . - . ID=GSCOCG00035288001;Name=Cc10_g13470 | |
| 48902 chr10 manual_curation mRNA 23505309 23507552 . - . ID=GSCOCT00035288001;Parent=GSCOCG00035288001;Name=Cc10_g13470 | |
| 48903 chr10 manual_curation polypeptide 23505309 23507552 . - . ID=GSCOCP00035288001;Dbxref=GENE3D:G3DSA:3.40.50.200,InterPro:IPR000209,InterPro:IPR003137,InterPro:IPR010259,InterPro:IPR015500,InterPro:IPR022398,PANTHER:PTHR10795,PFAM:PF00082,PFAM:PF02225,PFAM:PF05922,PRINTS:PR00723,PROSITE:PS00136,SUPERFAMILY:SSF52743,SwissProt:O64495,SwissProt:O65351,SwissProt:Q9LLL8,TAIR:AT1G04110.1,TAIR:AT3G14067.1,TAIR:AT5G67360.1,TrEMBL:C0ILP5,TrEMBL:F1DGA6,TrEMBL:F2Y9F0;Derives_from=GSCOCT00035288001;Name=Cc10_g13470;Ontology_term=CC_evidence_code:ISS,GO:0004252,GO:0006508,GO:0042802,GO:0043086,CC_EC_number:3.4.21.25,PRODUCT:Putative Subtilisin-like protease SDD1,CC_functional_completeness:complete,CC_gene:SDD1,CC_gene:ARA12,CC_gene:XSP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035288001~ Putative Subtilisin-like protease SDD1~ SDD1~ complete;original_location=975802..978045;owner=coffea | |
| 48904 chr10 manual_curation exon 23505309 23507552 . - . Parent=GSCOCT00035288001 | |
| 48905 chr10 manual_curation CDS 23505309 23507552 . - 0 Parent=GSCOCT00035288001 | |
| 48906 chr10 manual_curation gene 23522455 23524473 . - . ID=GSCOCG00035285001;Name=Cc10_g13480 | |
| 48907 chr10 manual_curation mRNA 23522455 23524473 . - . ID=GSCOCT00035285001;Parent=GSCOCG00035285001;Name=Cc10_g13480 | |
| 48908 chr10 manual_curation polypeptide 23523478 23523690 . - . ID=GSCOCP00035285001;Derives_from=GSCOCT00035285001;Name=Cc10_g13480;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035285001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=959664..959876;owner=coffea | |
| 48909 chr10 manual_curation exon 23522455 23524473 . - . Parent=GSCOCT00035285001 | |
| 48910 chr10 manual_curation CDS 23523478 23523690 . - 0 Parent=GSCOCT00035285001 | |
| 48911 chr10 manual_curation gene 23806149 23806715 . + . ID=GSCOCG00035279001;Name=Cc10_g13490 | |
| 48912 chr10 manual_curation mRNA 23806149 23806715 . + . ID=GSCOCT00035279001;Parent=GSCOCG00035279001;Name=Cc10_g13490 | |
| 48913 chr10 manual_curation polypeptide 23806149 23806715 . + . ID=GSCOCP00035279001;Dbxref=InterPro:IPR002528,PANTHER:PTHR11206,TrEMBL:G7IS00,TrEMBL:I1JG75,TrEMBL:I1LAB4;Derives_from=GSCOCT00035279001;Name=Cc10_g13490;Ontology_term=CC_evidence_code:ISS,GO:0006855,GO:0015238,GO:0015297,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Multidrug export protein mepA,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035279001~ Multidrug export protein mepA~ unknown_gene~ fragment;original_location=complement(join(677055..677205%2C676639..676733));owner=coffea | |
| 48914 chr10 manual_curation exon 23806621 23806715 . + . Parent=GSCOCT00035279001 | |
| 48915 chr10 manual_curation exon 23806149 23806299 . + . Parent=GSCOCT00035279001 | |
| 48916 chr10 manual_curation CDS 23806621 23806715 . + 1 Parent=GSCOCT00035279001 | |
| 48917 chr10 manual_curation CDS 23806149 23806299 . + 0 Parent=GSCOCT00035279001 | |
| 48918 chr10 manual_curation gene 23910133 23912232 . + . ID=GSCOCG00035278001;Name=Cc10_g13500 | |
| 48919 chr10 manual_curation mRNA 23910133 23912232 . + . ID=GSCOCT00035278001;Parent=GSCOCG00035278001;Name=Cc10_g13500 | |
| 48920 chr10 manual_curation polypeptide 23910133 23912232 . + . ID=GSCOCP00035278001;Dbxref=InterPro:IPR008979,InterPro:IPR012919,PFAM:PF07738,SUPERFAMILY:SSF49785,SwissProt:O59729,SwissProt:Q12232,SwissProt:Q54MI3,TAIR:AT1G22882.1,TAIR:AT1G71360.1,TAIR:AT4G23950.2,TrEMBL:B9N1M8,TrEMBL:F6GW16,TrEMBL:I1LVI2;Derives_from=GSCOCT00035278001;Name=Cc10_g13500;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Galactose-binding protein,CC_functional_completeness:fragment,CC_gene:slp1,CC_gene:sun2,CC_gene:SLP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035278001~ Putative Galactose-binding protein~ slp1~ fragment;original_location=complement(join(573202..573221%2C571933..573127%2C571759..571844%2C571122..571350));owner=coffea | |
| 48921 chr10 manual_curation exon 23912004 23912232 . + . Parent=GSCOCT00035278001 | |
| 48922 chr10 manual_curation exon 23911510 23911595 . + . Parent=GSCOCT00035278001 | |
| 48923 chr10 manual_curation exon 23910227 23911421 . + . Parent=GSCOCT00035278001 | |
| 48924 chr10 manual_curation exon 23910133 23910152 . + . Parent=GSCOCT00035278001 | |
| 48925 chr10 manual_curation CDS 23912004 23912232 . + 2 Parent=GSCOCT00035278001 | |
| 48926 chr10 manual_curation CDS 23911510 23911595 . + 0 Parent=GSCOCT00035278001 | |
| 48927 chr10 manual_curation CDS 23910227 23911421 . + 2 Parent=GSCOCT00035278001 | |
| 48928 chr10 manual_curation CDS 23910133 23910152 . + 0 Parent=GSCOCT00035278001 | |
| 48929 chr10 manual_curation gene 23913011 23915945 . - . ID=GSCOCG00035277001;Name=Cc10_g13510 | |
| 48930 chr10 manual_curation mRNA 23913011 23915945 . - . ID=GSCOCT00035277001;Parent=GSCOCG00035277001;Name=Cc10_g13510 | |
| 48931 chr10 manual_curation polypeptide 23913408 23915598 . - . ID=GSCOCP00035277001;Dbxref=InterPro:IPR011421,PFAM:PF07572,PROFILE:PS51279,SwissProt:Q4ADK7,SwissProt:Q75QI0,SwissProt:Q75UQ2,TAIR:AT5G30490.1,TrEMBL:A9PHA5,TrEMBL:B7FJR2,TrEMBL:D7T649;Derives_from=GSCOCT00035277001;Name=Cc10_g13510;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative CONTAINS InterPro DOMAIN/s,CC_functional_completeness:complete,CC_gene:CFDP1,CC_gene:Cfdp1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035277001~ Putative CONTAINS InterPro DOMAIN/s: Craniofacial development protein 1/Bucentaur (InterPro:IPR011421)%3B Has 333 Blast hits to 324 proteins in 149 species: Archae - 0%3B Bacteria - 18%3B Metazoa - 117%3B Fungi - 96%3B Plants - 49%3B Viruses - 0%3B Other Eukaryotes - 53 (source: NCBI BLink).~ CFDP1~ complete;original_location=join(567756..567765%2C568376..568459%2C568654..568781%2C568912..569109%2C569575..569946);owner=coffea | |
| 48932 chr10 manual_curation exon 23915589 23915945 . - . Parent=GSCOCT00035277001 | |
| 48933 chr10 manual_curation exon 23914895 23914978 . - . Parent=GSCOCT00035277001 | |
| 48934 chr10 manual_curation exon 23914573 23914700 . - . Parent=GSCOCT00035277001 | |
| 48935 chr10 manual_curation exon 23914245 23914442 . - . Parent=GSCOCT00035277001 | |
| 48936 chr10 manual_curation exon 23913011 23913779 . - . Parent=GSCOCT00035277001 | |
| 48937 chr10 manual_curation CDS 23915589 23915598 . - 0 Parent=GSCOCT00035277001 | |
| 48938 chr10 manual_curation CDS 23914895 23914978 . - 1 Parent=GSCOCT00035277001 | |
| 48939 chr10 manual_curation CDS 23914573 23914700 . - 1 Parent=GSCOCT00035277001 | |
| 48940 chr10 manual_curation CDS 23914245 23914442 . - 0 Parent=GSCOCT00035277001 | |
| 48941 chr10 manual_curation CDS 23913408 23913779 . - 0 Parent=GSCOCT00035277001 | |
| 48942 chr10 manual_curation gene 23920269 23921362 . + . ID=GSCOCG00035276001;Name=Cc10_g13520 | |
| 48943 chr10 manual_curation mRNA 23920269 23921362 . + . ID=GSCOCT00035276001;Parent=GSCOCG00035276001;Name=Cc10_g13520 | |
| 48944 chr10 manual_curation polypeptide 23920410 23921362 . + . ID=GSCOCP00035276001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019775,InterPro:IPR019781,InterPro:IPR019782,PFAM:PF00400,PROFILE:PS50082,PROFILE:PS50294,PROSITE:PS00678,SMART:SM00320,SUPERFAMILY:SSF50978,SwissProt:P79083,SwissProt:Q38884,SwissProt:Q7RXH4,TAIR:AT1G15470.1,TAIR:AT2G46280.1,TAIR:AT2G46290.1,TrEMBL:A9PCW6,TrEMBL:D7LDY2,TrEMBL:Q8GWC2;Derives_from=GSCOCT00035276001;Name=Cc10_g13520;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Eukaryotic translation initiation factor 3 subunit I,CC_functional_completeness:fragment,CC_gene:TIF3I1,CC_gene:tif34,CC_gene:tif-34;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035276001~ Eukaryotic translation initiation factor 3 subunit I~ TIF3I1~ fragment;original_location=complement(join(562761..562944%2C561992..562137));owner=coffea | |
| 48945 chr10 manual_curation exon 23921217 23921362 . + . Parent=GSCOCT00035276001 | |
| 48946 chr10 manual_curation exon 23920269 23920593 . + . Parent=GSCOCT00035276001 | |
| 48947 chr10 manual_curation CDS 23921217 23921362 . + 1 Parent=GSCOCT00035276001 | |
| 48948 chr10 manual_curation CDS 23920410 23920593 . + 0 Parent=GSCOCT00035276001 | |
| 48949 chr10 manual_curation gene 23924544 23924768 . + . ID=GSCOCG00035274001;Name=Cc10_g13530 | |
| 48950 chr10 manual_curation mRNA 23924544 23924768 . + . ID=GSCOCT00035274001;Parent=GSCOCG00035274001;Name=Cc10_g13530 | |
| 48951 chr10 manual_curation polypeptide 23924544 23924768 . + . ID=GSCOCP00035274001;Dbxref=TAIR:AT1G71350.1,TrEMBL:I1KZQ8,TrEMBL:I1LVH4;Derives_from=GSCOCT00035274001;Name=Cc10_g13530;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035274001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(558586..558810);owner=coffea | |
| 48952 chr10 manual_curation exon 23924544 23924768 . + . Parent=GSCOCT00035274001 | |
| 48953 chr10 manual_curation CDS 23924544 23924768 . + 0 Parent=GSCOCT00035274001 | |
| 48954 chr10 manual_curation gene 23942073 23944265 . - . ID=GSCOCG00035271001;Name=Cc10_g13540 | |
| 48955 chr10 manual_curation mRNA 23942073 23944265 . - . ID=GSCOCT00035271001;Parent=GSCOCG00035271001;Name=Cc10_g13540 | |
| 48956 chr10 manual_curation polypeptide 23942276 23944032 . - . ID=GSCOCP00035271001;Dbxref=GENE3D:G3DSA:3.40.1120.10,InterPro:IPR000439,InterPro:IPR012678,InterPro:IPR020925,PANTHER:PTHR11847,PFAM:PF00827,PROSITE:PS01194,SUPERFAMILY:SSF54189,SwissProt:O23515,SwissProt:Q8VYF1,TAIR:AT4G16720.1,TAIR:AT4G17390.1,TrEMBL:B4FMB3,TrEMBL:B4G0W2,TrEMBL:B6TP42,TrEMBL:F2DL85,TrEMBL:Q6L5M2;Derives_from=GSCOCT00035271001;Name=Cc10_g13540;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:60S ribosomal protein L15-1,CC_functional_completeness:complete,CC_gene:RPL15,CC_gene:RPL15A,CC_gene:RPL15B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035271001~ 60S ribosomal protein L15-1~ RPL15~ complete;original_location=join(539322..539438%2C540364..540561%2C540833..541078);owner=coffea | |
| 48957 chr10 manual_curation exon 23944196 23944265 . - . Parent=GSCOCT00035271001 | |
| 48958 chr10 manual_curation exon 23943916 23944082 . - . Parent=GSCOCT00035271001 | |
| 48959 chr10 manual_curation exon 23942793 23942990 . - . Parent=GSCOCT00035271001 | |
| 48960 chr10 manual_curation exon 23942073 23942521 . - . Parent=GSCOCT00035271001 | |
| 48961 chr10 manual_curation CDS 23943916 23944032 . - 0 Parent=GSCOCT00035271001 | |
| 48962 chr10 manual_curation CDS 23942793 23942990 . - 0 Parent=GSCOCT00035271001 | |
| 48963 chr10 manual_curation CDS 23942276 23942521 . - 0 Parent=GSCOCT00035271001 | |
| 48964 chr10 manual_curation gene 23944997 23945580 . - . ID=GSCOCG00035270001;Name=Cc10_g13550 | |
| 48965 chr10 manual_curation mRNA 23944997 23945580 . - . ID=GSCOCT00035270001;Parent=GSCOCG00035270001;Name=Cc10_g13550 | |
| 48966 chr10 manual_curation polypeptide 23945248 23945580 . - . ID=GSCOCP00035270001;Dbxref=InterPro:IPR005345,PANTHER:PTHR13120,PFAM:PF03660,PIR:PIRSF016468,SwissProt:P0DI19,SwissProt:P83871,SwissProt:Q0WMV8,TAIR:AT1G07170.1,TAIR:AT2G30000.1,TrEMBL:I1QEZ2,TrEMBL:Q01K32,TrEMBL:Q7XM15;Derives_from=GSCOCT00035270001;Name=Cc10_g13550;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:PHD finger-like domain-containing protein 5B,CC_functional_completeness:complete,CC_gene:At1g07170,CC_gene:At2g30000,CC_gene:Phf5a;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035270001~ PHD finger-like domain-containing protein 5B~ At1g07170~ complete;original_location=537774..538106;owner=coffea | |
| 48967 chr10 manual_curation exon 23944997 23945580 . - . Parent=GSCOCT00035270001 | |
| 48968 chr10 manual_curation CDS 23945248 23945580 . - 0 Parent=GSCOCT00035270001 | |
| 48969 chr10 manual_curation gene 23945719 23947010 . + . ID=GSCOCG00035269001;Name=Cc10_g13560 | |
| 48970 chr10 manual_curation mRNA 23945719 23947010 . + . ID=GSCOCT00035269001;Parent=GSCOCG00035269001;Name=Cc10_g13560 | |
| 48971 chr10 manual_curation polypeptide 23945719 23947010 . + . ID=GSCOCP00035269001;Dbxref=InterPro:IPR007196,PFAM:PF04054;Derives_from=GSCOCT00035269001;Name=Cc10_g13560;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative CCR4-Not complex component%2C Not1,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035269001~ Putative CCR4-Not complex component%2C Not1~ unknown_gene~ complete;original_location=complement(join(537627..537635%2C536540..536629%2C536344..536472));owner=coffea | |
| 48972 chr10 manual_curation exon 23946882 23947010 . + . Parent=GSCOCT00035269001 | |
| 48973 chr10 manual_curation exon 23946725 23946814 . + . Parent=GSCOCT00035269001 | |
| 48974 chr10 manual_curation exon 23945719 23945727 . + . Parent=GSCOCT00035269001 | |
| 48975 chr10 manual_curation CDS 23946882 23947010 . + 0 Parent=GSCOCT00035269001 | |
| 48976 chr10 manual_curation CDS 23946725 23946814 . + 0 Parent=GSCOCT00035269001 | |
| 48977 chr10 manual_curation CDS 23945719 23945727 . + 0 Parent=GSCOCT00035269001 | |
| 48978 chr10 manual_curation gene 23958639 23966165 . - . ID=GSCOCG00035266001;Name=Cc10_g13570 | |
| 48979 chr10 manual_curation mRNA 23958639 23966165 . - . ID=GSCOCT00035266001;Parent=GSCOCG00035266001;Name=Cc10_g13570 | |
| 48980 chr10 manual_curation polypeptide 23959119 23962348 . - . ID=GSCOCP00035266001;Dbxref=InterPro:IPR001841,InterPro:IPR001965,InterPro:IPR011011,InterPro:IPR019786,InterPro:IPR019787,PFAM:PF00628,PROFILE:PS50016,PROFILE:PS50089,PROSITE:PS01359,SMART:SM00249,SUPERFAMILY:SSF57903,SwissProt:O14686,SwissProt:Q6PDK2,SwissProt:Q9SGH2,TAIR:AT1G77250.1,TAIR:AT3G01460.1,TrEMBL:B9GTY7,TrEMBL:B9S2S4,TrEMBL:F6H0H1;Derives_from=GSCOCT00035266001;Name=Cc10_g13570;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative RING/FYVE/PHD-type zinc finger family protein,CC_functional_completeness:fragment,CC_gene:MBD9,CC_gene:Mll2,CC_gene:MLL2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035266001~ Putative RING/FYVE/PHD-type zinc finger family protein~ MBD9~ fragment;original_location=join(521006..521158%2C521262..521594%2C522203..522292%2C522454..522498%2C523333..524235);owner=coffea | |
| 48981 chr10 manual_curation exon 23966059 23966165 . - . Parent=GSCOCT00035266001 | |
| 48982 chr10 manual_curation exon 23963374 23963418 . - . Parent=GSCOCT00035266001 | |
| 48983 chr10 manual_curation exon 23962196 23962429 . - . Parent=GSCOCT00035266001 | |
| 48984 chr10 manual_curation exon 23961760 23962092 . - . Parent=GSCOCT00035266001 | |
| 48985 chr10 manual_curation exon 23961062 23961151 . - . Parent=GSCOCT00035266001 | |
| 48986 chr10 manual_curation exon 23960856 23960900 . - . Parent=GSCOCT00035266001 | |
| 48987 chr10 manual_curation exon 23958639 23960021 . - . Parent=GSCOCT00035266001 | |
| 48988 chr10 manual_curation CDS 23962196 23962348 . - 0 Parent=GSCOCT00035266001 | |
| 48989 chr10 manual_curation CDS 23961760 23962092 . - 0 Parent=GSCOCT00035266001 | |
| 48990 chr10 manual_curation CDS 23961062 23961151 . - 0 Parent=GSCOCT00035266001 | |
| 48991 chr10 manual_curation CDS 23960856 23960900 . - 0 Parent=GSCOCT00035266001 | |
| 48992 chr10 manual_curation CDS 23959119 23960021 . - 0 Parent=GSCOCT00035266001 | |
| 48993 chr10 manual_curation gene 23971015 23971672 . + . ID=GSCOCG00035265001;Name=Cc10_g13580 | |
| 48994 chr10 manual_curation mRNA 23971015 23971672 . + . ID=GSCOCT00035265001;Parent=GSCOCG00035265001;Name=Cc10_g13580 | |
| 48995 chr10 manual_curation polypeptide 23971015 23971672 . + . ID=GSCOCP00035265001;Derives_from=GSCOCT00035265001;Name=Cc10_g13580;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035265001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(512225..512339%2C511682..511761));owner=coffea | |
| 48996 chr10 manual_curation exon 23971593 23971672 . + . Parent=GSCOCT00035265001 | |
| 48997 chr10 manual_curation exon 23971015 23971129 . + . Parent=GSCOCT00035265001 | |
| 48998 chr10 manual_curation CDS 23971593 23971672 . + 1 Parent=GSCOCT00035265001 | |
| 48999 chr10 manual_curation CDS 23971015 23971129 . + 0 Parent=GSCOCT00035265001 | |
| 49000 chr10 manual_curation gene 23976298 23979102 . + . ID=GSCOCG00035264001;Name=Cc10_g13590 | |
| 49001 chr10 manual_curation mRNA 23976298 23979102 . + . ID=GSCOCT00035264001;Parent=GSCOCG00035264001;Name=Cc10_g13590 | |
| 49002 chr10 manual_curation polypeptide 23976514 23978854 . + . ID=GSCOCP00035264001;Dbxref=GENE3D:G3DSA:3.30.710.10,InterPro:IPR000210,InterPro:IPR011333,InterPro:IPR013069,InterPro:IPR013089,PANTHER:PTHR23230,PFAM:PF00651,PROFILE:PS50097,SMART:SM00225,SUPERFAMILY:SSF54695,SwissProt:Q6DBN1,SwissProt:Q6P8B3,SwissProt:Q717B2,TAIR:AT1G01640.1,TAIR:AT3G56230.1,TAIR:AT4G08455.1,TrEMBL:B9GTY8,TrEMBL:B9H7K2,TrEMBL:B9S2S7;Derives_from=GSCOCT00035264001;Name=Cc10_g13590;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:BTB/POZ domain-containing protein At4g08455,CC_functional_completeness:complete,CC_gene:At4g08455,CC_gene:Tdpoz2,CC_gene:spop;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035264001~ BTB/POZ domain-containing protein At4g08455~ At4g08455~ complete;original_location=complement(join(506577..506840%2C504500..504967));owner=coffea | |
| 49003 chr10 manual_curation exon 23978387 23979102 . + . Parent=GSCOCT00035264001 | |
| 49004 chr10 manual_curation exon 23976298 23976777 . + . Parent=GSCOCT00035264001 | |
| 49005 chr10 manual_curation CDS 23978387 23978854 . + 0 Parent=GSCOCT00035264001 | |
| 49006 chr10 manual_curation CDS 23976514 23976777 . + 0 Parent=GSCOCT00035264001 | |
| 49007 chr10 manual_curation gene 23979276 23980678 . - . ID=GSCOCG00035263001;Name=Cc10_g13600 | |
| 49008 chr10 manual_curation mRNA 23979276 23980678 . - . ID=GSCOCT00035263001;Parent=GSCOCG00035263001;Name=Cc10_g13600 | |
| 49009 chr10 manual_curation polypeptide 23979520 23980005 . - . ID=GSCOCP00035263001;Dbxref=GENE3D:G3DSA:1.10.238.10,InterPro:IPR002048,InterPro:IPR011992,InterPro:IPR018247,InterPro:IPR018248,InterPro:IPR018249,PFAM:PF00036,PROFILE:PS50222,PROSITE:PS00018,SMART:SM00054,SwissProt:Q10LX4,SwissProt:Q9LPK5,SwissProt:Q9SVG9,TAIR:AT1G21550.1,TAIR:AT4G20780.1,TAIR:AT5G44460.1,TrEMBL:A4L9I0,TrEMBL:B9GTZ1,TrEMBL:B9S2S9;Derives_from=GSCOCT00035263001;Name=Cc10_g13600;Ontology_term=CC_evidence_code:ISS,GO:0005509,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable calcium-binding protein CML44,CC_functional_completeness:complete,CC_gene:CML44,CC_gene:CML42,CC_gene:CML27;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035263001~ Putative Probable calcium-binding protein CML44~ CML44~ complete;original_location=503349..503834;owner=coffea | |
| 49010 chr10 manual_curation exon 23979276 23980678 . - . Parent=GSCOCT00035263001 | |
| 49011 chr10 manual_curation CDS 23979520 23980005 . - 0 Parent=GSCOCT00035263001 | |
| 49012 chr10 manual_curation gene 23980840 23981719 . - . ID=GSCOCG00035262001;Name=Cc10_g13610 | |
| 49013 chr10 manual_curation mRNA 23980840 23981719 . - . ID=GSCOCT00035262001;Parent=GSCOCG00035262001;Name=Cc10_g13610 | |
| 49014 chr10 manual_curation polypeptide 23980996 23981466 . - . ID=GSCOCP00035262001;Dbxref=GENE3D:G3DSA:1.10.238.10,InterPro:IPR002048,InterPro:IPR011992,InterPro:IPR018247,InterPro:IPR018248,InterPro:IPR018249,PFAM:PF00036,PROFILE:PS50222,PROSITE:PS00018,SMART:SM00054,SwissProt:Q0JC44,SwissProt:Q9LPK5,SwissProt:Q9SVG9,TAIR:AT1G21550.1,TAIR:AT4G20780.1,TAIR:AT5G44460.1,TrEMBL:A4L9I0,TrEMBL:F6H0H4,TrEMBL:I1LXD2;Derives_from=GSCOCT00035262001;Name=Cc10_g13610;Ontology_term=CC_evidence_code:ISS,GO:0005509,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable calcium-binding protein CML44,CC_functional_completeness:complete,CC_gene:CML44,CC_gene:CML42,CC_gene:CML22;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035262001~ Putative Probable calcium-binding protein CML44~ CML44~ complete;original_location=501888..502358;owner=coffea | |
| 49015 chr10 manual_curation exon 23980840 23981719 . - . Parent=GSCOCT00035262001 | |
| 49016 chr10 manual_curation CDS 23980996 23981466 . - 0 Parent=GSCOCT00035262001 | |
| 49017 chr10 manual_curation gene 23999548 24000003 . - . ID=GSCOCG00035260001;Name=Cc10_g13620 | |
| 49018 chr10 manual_curation mRNA 23999548 24000003 . - . ID=GSCOCT00035260001;Parent=GSCOCG00035260001;Name=Cc10_g13620 | |
| 49019 chr10 manual_curation polypeptide 23999548 24000003 . - . ID=GSCOCP00035260001;Dbxref=GENE3D:G3DSA:1.10.238.10,InterPro:IPR002048,InterPro:IPR011992,InterPro:IPR018247,InterPro:IPR018248,InterPro:IPR018249,PFAM:PF00036,PROFILE:PS50222,PROSITE:PS00018,SMART:SM00054,SwissProt:Q8RZB5,SwissProt:Q9LPK5,SwissProt:Q9SVG9,TAIR:AT1G21550.1,TAIR:AT4G20780.1,TAIR:AT5G44460.1,TrEMBL:A4L9I0,TrEMBL:B9GTZ1,TrEMBL:B9S2S9;Derives_from=GSCOCT00035260001;Name=Cc10_g13620;Ontology_term=CC_evidence_code:ISS,GO:0005509,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable calcium-binding protein CML44,CC_functional_completeness:complete,CC_gene:CML44,CC_gene:CML42,CC_gene:CML10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035260001~ Putative Probable calcium-binding protein CML44~ CML44~ complete;original_location=483351..483806;owner=coffea | |
| 49020 chr10 manual_curation exon 23999548 24000003 . - . Parent=GSCOCT00035260001 | |
| 49021 chr10 manual_curation CDS 23999548 24000003 . - 0 Parent=GSCOCT00035260001 | |
| 49022 chr10 manual_curation gene 24027052 24030093 . - . ID=GSCOCG00035258001;Name=Cc10_g13630 | |
| 49023 chr10 manual_curation mRNA 24027052 24030093 . - . ID=GSCOCT00035258001;Parent=GSCOCG00035258001;Name=Cc10_g13630 | |
| 49024 chr10 manual_curation polypeptide 24027109 24030093 . - . ID=GSCOCP00035258001;Dbxref=GENE3D:G3DSA:1.10.238.10,InterPro:IPR002048,InterPro:IPR011992,InterPro:IPR018247,InterPro:IPR018248,InterPro:IPR018249,PFAM:PF00036,PROFILE:PS50222,PROSITE:PS00018,SMART:SM00054,SwissProt:Q0JC44,SwissProt:Q2QVI1,SwissProt:Q9LPK5,TAIR:AT1G21550.1,TAIR:AT4G20780.1,TAIR:AT5G37770.1,TrEMBL:A4L9I0,TrEMBL:B9GTZ1,TrEMBL:B9H7K0;Derives_from=GSCOCT00035258001;Name=Cc10_g13630;Ontology_term=CC_evidence_code:ISS,GO:0005509,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable calcium-binding protein CML44,CC_functional_completeness:complete,CC_gene:CML44,CC_gene:CML22,CC_gene:CML28;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035258001~ Putative Probable calcium-binding protein CML44~ CML44~ complete;original_location=join(453261..453633%2C456151..456245);owner=coffea | |
| 49025 chr10 manual_curation exon 24029721 24030093 . - . Parent=GSCOCT00035258001 | |
| 49026 chr10 manual_curation exon 24027052 24027203 . - . Parent=GSCOCT00035258001 | |
| 49027 chr10 manual_curation CDS 24029721 24030093 . - 0 Parent=GSCOCT00035258001 | |
| 49028 chr10 manual_curation CDS 24027109 24027203 . - 1 Parent=GSCOCT00035258001 | |
| 49029 chr10 manual_curation gene 24030882 24042716 . - . ID=GSCOCG00035257001;Name=Cc10_g13640 | |
| 49030 chr10 manual_curation mRNA 24030882 24042716 . - . ID=GSCOCT00035257001;Parent=GSCOCG00035257001;Name=Cc10_g13640 | |
| 49031 chr10 manual_curation polypeptide 24031203 24042494 . - . ID=GSCOCP00035257001;Dbxref=InterPro:IPR002618,PANTHER:PTHR11952,PFAM:PF01704,SwissProt:Q0GZS3,SwissProt:Q5W915,SwissProt:Q9C5I1,TAIR:AT1G31070.2,TAIR:AT2G35020.1,TAIR:AT5G52560.1,TrEMBL:B9S2T0,TrEMBL:D7MS64,TrEMBL:E0CR04;Derives_from=GSCOCT00035257001;Name=Cc10_g13640;Ontology_term=CC_evidence_code:ISS,GO:0008152,GO:0016779,CC_EC_number:missing_EC_number,PRODUCT:UDP-sugar pyrophospharylase,CC_functional_completeness:complete,CC_gene:USP;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035257001~ UDP-sugar pyrophospharylase~ USP~ complete;original_location=join(440860..441060%2C441889..442005%2C443153..443293%2C443937..444036%2C444792..444919%2C444995..445066%2C445161..445225%2C445643..445703%2C445798..445915%2C446901..447025%2C447797..447873%2C449239..449344%2C449454..449513%2C450948..451028%2C451630..451869%2C451984..452151);owner=coffea | |
| 49032 chr10 manual_curation exon 24042294 24042716 . - . Parent=GSCOCT00035257001 | |
| 49033 chr10 manual_curation exon 24041349 24041465 . - . Parent=GSCOCT00035257001 | |
| 49034 chr10 manual_curation exon 24040061 24040201 . - . Parent=GSCOCT00035257001 | |
| 49035 chr10 manual_curation exon 24039318 24039417 . - . Parent=GSCOCT00035257001 | |
| 49036 chr10 manual_curation exon 24038435 24038562 . - . Parent=GSCOCT00035257001 | |
| 49037 chr10 manual_curation exon 24038288 24038359 . - . Parent=GSCOCT00035257001 | |
| 49038 chr10 manual_curation exon 24038129 24038193 . - . Parent=GSCOCT00035257001 | |
| 49039 chr10 manual_curation exon 24037651 24037711 . - . Parent=GSCOCT00035257001 | |
| 49040 chr10 manual_curation exon 24037439 24037556 . - . Parent=GSCOCT00035257001 | |
| 49041 chr10 manual_curation exon 24036329 24036453 . - . Parent=GSCOCT00035257001 | |
| 49042 chr10 manual_curation exon 24035481 24035557 . - . Parent=GSCOCT00035257001 | |
| 49043 chr10 manual_curation exon 24034010 24034115 . - . Parent=GSCOCT00035257001 | |
| 49044 chr10 manual_curation exon 24033841 24033900 . - . Parent=GSCOCT00035257001 | |
| 49045 chr10 manual_curation exon 24032326 24032406 . - . Parent=GSCOCT00035257001 | |
| 49046 chr10 manual_curation exon 24031485 24031724 . - . Parent=GSCOCT00035257001 | |
| 49047 chr10 manual_curation exon 24030882 24031370 . - . Parent=GSCOCT00035257001 | |
| 49048 chr10 manual_curation CDS 24042294 24042494 . - 0 Parent=GSCOCT00035257001 | |
| 49049 chr10 manual_curation CDS 24041349 24041465 . - 0 Parent=GSCOCT00035257001 | |
| 49050 chr10 manual_curation CDS 24040061 24040201 . - 0 Parent=GSCOCT00035257001 | |
| 49051 chr10 manual_curation CDS 24039318 24039417 . - 0 Parent=GSCOCT00035257001 | |
| 49052 chr10 manual_curation CDS 24038435 24038562 . - 1 Parent=GSCOCT00035257001 | |
| 49053 chr10 manual_curation CDS 24038288 24038359 . - 0 Parent=GSCOCT00035257001 | |
| 49054 chr10 manual_curation CDS 24038129 24038193 . - 0 Parent=GSCOCT00035257001 | |
| 49055 chr10 manual_curation CDS 24037651 24037711 . - 2 Parent=GSCOCT00035257001 | |
| 49056 chr10 manual_curation CDS 24037439 24037556 . - 0 Parent=GSCOCT00035257001 | |
| 49057 chr10 manual_curation CDS 24036329 24036453 . - 1 Parent=GSCOCT00035257001 | |
| 49058 chr10 manual_curation CDS 24035481 24035557 . - 0 Parent=GSCOCT00035257001 | |
| 49059 chr10 manual_curation CDS 24034010 24034115 . - 2 Parent=GSCOCT00035257001 | |
| 49060 chr10 manual_curation CDS 24033841 24033900 . - 0 Parent=GSCOCT00035257001 | |
| 49061 chr10 manual_curation CDS 24032326 24032406 . - 0 Parent=GSCOCT00035257001 | |
| 49062 chr10 manual_curation CDS 24031485 24031724 . - 0 Parent=GSCOCT00035257001 | |
| 49063 chr10 manual_curation CDS 24031203 24031370 . - 0 Parent=GSCOCT00035257001 | |
| 49064 chr10 manual_curation gene 24045179 24052116 . - . ID=GSCOCG00035255001;Name=Cc10_g13650 | |
| 49065 chr10 manual_curation mRNA 24045179 24052116 . - . ID=GSCOCT00035255001;Parent=GSCOCG00035255001;Name=Cc10_g13650 | |
| 49066 chr10 manual_curation polypeptide 24045691 24052004 . - . ID=GSCOCP00035255001;Dbxref=InterPro:IPR003593,InterPro:IPR003959,InterPro:IPR003960,InterPro:IPR009010,InterPro:IPR015342,PFAM:PF00004,PFAM:PF09262,PROSITE:PS00674,SMART:SM00382,SUPERFAMILY:SSF50692,SwissProt:O43933,SwissProt:Q5BL07,SwissProt:Q9FNP1,TAIR:AT3G53230.1,TAIR:AT5G03340.1,TAIR:AT5G08470.1,TrEMBL:B9RV01,TrEMBL:F6H2Q4,TrEMBL:I1KMB2;Derives_from=GSCOCT00035255001;Name=Cc10_g13650;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005488,GO:0005515,GO:0005524,GO:0005777,GO:0007031,GO:0017111,CC_EC_number:3.6.4.6,PRODUCT:Peroxisome biogenesis protein 1,CC_functional_completeness:complete,CC_gene:PEX1,CC_gene:Pex1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035255001~ Peroxisome biogenesis protein 1~ PEX1~ complete;original_location=join(431350..431553%2C431637..431810%2C432243..432342%2C433277..433768%2C435126..437539%2C437625..437663);owner=coffea | |
| 49067 chr10 manual_curation exon 24051801 24052116 . - . Parent=GSCOCT00035255001 | |
| 49068 chr10 manual_curation exon 24051544 24051717 . - . Parent=GSCOCT00035255001 | |
| 49069 chr10 manual_curation exon 24051012 24051111 . - . Parent=GSCOCT00035255001 | |
| 49070 chr10 manual_curation exon 24049586 24050077 . - . Parent=GSCOCT00035255001 | |
| 49071 chr10 manual_curation exon 24045815 24048228 . - . Parent=GSCOCT00035255001 | |
| 49072 chr10 manual_curation exon 24045179 24045729 . - . Parent=GSCOCT00035255001 | |
| 49073 chr10 manual_curation CDS 24051801 24052004 . - 0 Parent=GSCOCT00035255001 | |
| 49074 chr10 manual_curation CDS 24051544 24051717 . - 0 Parent=GSCOCT00035255001 | |
| 49075 chr10 manual_curation CDS 24051012 24051111 . - 0 Parent=GSCOCT00035255001 | |
| 49076 chr10 manual_curation CDS 24049586 24050077 . - 1 Parent=GSCOCT00035255001 | |
| 49077 chr10 manual_curation CDS 24045815 24048228 . - 1 Parent=GSCOCT00035255001 | |
| 49078 chr10 manual_curation CDS 24045691 24045729 . - 0 Parent=GSCOCT00035255001 | |
| 49079 chr10 manual_curation gene 24111764 24114185 . + . ID=GSCOCG00035253001;Name=Cc10_g13660 | |
| 49080 chr10 manual_curation mRNA 24111764 24114185 . + . ID=GSCOCT00035253001;Parent=GSCOCG00035253001;Name=Cc10_g13660 | |
| 49081 chr10 manual_curation polypeptide 24111764 24112944 . + . ID=GSCOCP00035253001;Dbxref=TrEMBL:F6H0H5;Derives_from=GSCOCT00035253001;Name=Cc10_g13660;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035253001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=complement(join(371428..371590%2C370410..370537));owner=coffea | |
| 49082 chr10 manual_curation exon 24112817 24114185 . + . Parent=GSCOCT00035253001 | |
| 49083 chr10 manual_curation exon 24111764 24111926 . + . Parent=GSCOCT00035253001 | |
| 49084 chr10 manual_curation CDS 24112817 24112944 . + 1 Parent=GSCOCT00035253001 | |
| 49085 chr10 manual_curation CDS 24111764 24111926 . + 0 Parent=GSCOCT00035253001 | |
| 49086 chr10 manual_curation gene 24117163 24118905 . + . ID=GSCOCG00035252001;Name=Cc10_g13670 | |
| 49087 chr10 manual_curation mRNA 24117163 24118905 . + . ID=GSCOCT00035252001;Parent=GSCOCG00035252001;Name=Cc10_g13670 | |
| 49088 chr10 manual_curation polypeptide 24117163 24118905 . + . ID=GSCOCP00035252001;Dbxref=InterPro:IPR003690,PFAM:PF02536,SMART:SM00733,TAIR:AT4G19650.1,TAIR:AT5G06810.1,TAIR:AT5G45113.1,TrEMBL:B9NA49,TrEMBL:D7MG98,TrEMBL:F6HIU0;Derives_from=GSCOCT00035252001;Name=Cc10_g13670;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Mitochondrial transcription termination factor family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035252001~ Mitochondrial transcription termination factor family protein~ unknown_gene~ complete;original_location=complement(364449..366191);owner=coffea | |
| 49089 chr10 manual_curation exon 24117163 24118905 . + . Parent=GSCOCT00035252001 | |
| 49090 chr10 manual_curation CDS 24117163 24118905 . + 0 Parent=GSCOCT00035252001 | |
| 49091 chr10 manual_curation gene 24120030 24123064 . - . ID=GSCOCG00035251001;Name=Cc10_g13680 | |
| 49092 chr10 manual_curation mRNA 24120030 24123064 . - . ID=GSCOCT00035251001;Parent=GSCOCG00035251001;Name=Cc10_g13680 | |
| 49093 chr10 manual_curation polypeptide 24120932 24122853 . - . ID=GSCOCP00035251001;Dbxref=InterPro:IPR016107,InterPro:IPR018922,PFAM:PF01065,PFAM:PF10664,SwissProt:A7NVJ4,SwissProt:A9PJQ8,SwissProt:Q2V2S7,TAIR:AT4G37925.1,TrEMBL:B9S2T3,TrEMBL:C9EIN8,TrEMBL:I1JZ11;Derives_from=GSCOCT00035251001;Name=Cc10_g13680;Ontology_term=CC_evidence_code:ISS,GO:0005198,GO:0019028,GO:0055114,CC_EC_number:missing_EC_number,PRODUCT:NAD(P)H-quinone oxidoreductase subunit M%2C chloroplastic,CC_functional_completeness:complete,CC_gene:ndhM;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035251001~ NAD(P)H-quinone oxidoreductase subunit M%2C chloroplastic~ ndhM~ complete;original_location=join(360501..360950%2C362237..362422);owner=coffea | |
| 49094 chr10 manual_curation exon 24120030 24120588 . - . Parent=GSCOCT00035251001 | |
| 49095 chr10 manual_curation exon 24122404 24123064 . - . Parent=GSCOCT00035251001 | |
| 49096 chr10 manual_curation exon 24120927 24121117 . - . Parent=GSCOCT00035251001 | |
| 49097 chr10 manual_curation CDS 24122404 24122853 . - 0 Parent=GSCOCT00035251001 | |
| 49098 chr10 manual_curation CDS 24120932 24121117 . - 0 Parent=GSCOCT00035251001 | |
| 49099 chr10 manual_curation gene 24123640 24133850 . - . ID=GSCOCG00035250001;Name=Cc10_g13690 | |
| 49100 chr10 manual_curation mRNA 24123640 24133850 . - . ID=GSCOCT00035250001;Parent=GSCOCG00035250001;Name=Cc10_g13690 | |
| 49101 chr10 manual_curation polypeptide 24123867 24133850 . - . ID=GSCOCP00035250001;Dbxref=InterPro:IPR000571,PROFILE:PS50103,SMART:SM00356,SwissProt:Q3ED78,SwissProt:Q8CHP0,SwissProt:Q8IXZ2,TAIR:AT1G21580.1,TrEMBL:B9GTZ4,TrEMBL:B9S2T4,TrEMBL:F6H0H6;Derives_from=GSCOCT00035250001;Name=Cc10_g13690;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Zinc finger CCCH domain-containing protein 7,CC_functional_completeness:modules,CC_gene:At1g21570,CC_gene:ZC3H3,CC_gene:Zc3h3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035250001~ Zinc finger CCCH domain-containing protein 7~ At1g21570~ modules;original_location=join(349504..350101%2C350327..351783%2C351919..352074%2C352159..354472%2C355043..355232%2C355344..355494%2C355599..355692%2C355915..355989%2C357502..357589%2C357771..358041%2C358139..358181%2C358250..358353%2C359002..359487);owner=coffea | |
| 49102 chr10 manual_curation exon 24133253 24133850 . - . Parent=GSCOCT00035250001 | |
| 49103 chr10 manual_curation exon 24131571 24133027 . - . Parent=GSCOCT00035250001 | |
| 49104 chr10 manual_curation exon 24131280 24131435 . - . Parent=GSCOCT00035250001 | |
| 49105 chr10 manual_curation exon 24128882 24131195 . - . Parent=GSCOCT00035250001 | |
| 49106 chr10 manual_curation exon 24128122 24128311 . - . Parent=GSCOCT00035250001 | |
| 49107 chr10 manual_curation exon 24127860 24128010 . - . Parent=GSCOCT00035250001 | |
| 49108 chr10 manual_curation exon 24127662 24127755 . - . Parent=GSCOCT00035250001 | |
| 49109 chr10 manual_curation exon 24127365 24127439 . - . Parent=GSCOCT00035250001 | |
| 49110 chr10 manual_curation exon 24125765 24125852 . - . Parent=GSCOCT00035250001 | |
| 49111 chr10 manual_curation exon 24125313 24125583 . - . Parent=GSCOCT00035250001 | |
| 49112 chr10 manual_curation exon 24125173 24125215 . - . Parent=GSCOCT00035250001 | |
| 49113 chr10 manual_curation exon 24125001 24125104 . - . Parent=GSCOCT00035250001 | |
| 49114 chr10 manual_curation exon 24123640 24124352 . - . Parent=GSCOCT00035250001 | |
| 49115 chr10 manual_curation CDS 24133253 24133850 . - 0 Parent=GSCOCT00035250001 | |
| 49116 chr10 manual_curation CDS 24131571 24133027 . - 1 Parent=GSCOCT00035250001 | |
| 49117 chr10 manual_curation CDS 24131280 24131435 . - 0 Parent=GSCOCT00035250001 | |
| 49118 chr10 manual_curation CDS 24128882 24131195 . - 0 Parent=GSCOCT00035250001 | |
| 49119 chr10 manual_curation CDS 24128122 24128311 . - 1 Parent=GSCOCT00035250001 | |
| 49120 chr10 manual_curation CDS 24127860 24128010 . - 2 Parent=GSCOCT00035250001 | |
| 49121 chr10 manual_curation CDS 24127662 24127755 . - 0 Parent=GSCOCT00035250001 | |
| 49122 chr10 manual_curation CDS 24127365 24127439 . - 1 Parent=GSCOCT00035250001 | |
| 49123 chr10 manual_curation CDS 24125765 24125852 . - 1 Parent=GSCOCT00035250001 | |
| 49124 chr10 manual_curation CDS 24125313 24125583 . - 2 Parent=GSCOCT00035250001 | |
| 49125 chr10 manual_curation CDS 24125173 24125215 . - 0 Parent=GSCOCT00035250001 | |
| 49126 chr10 manual_curation CDS 24125001 24125104 . - 1 Parent=GSCOCT00035250001 | |
| 49127 chr10 manual_curation CDS 24123867 24124352 . - 0 Parent=GSCOCT00035250001 | |
| 49128 chr10 manual_curation gene 24135588 24136444 . + . ID=GSCOCG00035249001;Name=Cc10_g13700 | |
| 49129 chr10 manual_curation mRNA 24135588 24136444 . + . ID=GSCOCT00035249001;Parent=GSCOCG00035249001;Name=Cc10_g13700 | |
| 49130 chr10 manual_curation polypeptide 24135760 24136444 . + . ID=GSCOCP00035249001;Derives_from=GSCOCT00035249001;Name=Cc10_g13700;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035249001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(347553..347594%2C347153..347272%2C346910..347029));owner=coffea | |
| 49131 chr10 manual_curation exon 24136325 24136444 . + . Parent=GSCOCT00035249001 | |
| 49132 chr10 manual_curation exon 24136082 24136201 . + . Parent=GSCOCT00035249001 | |
| 49133 chr10 manual_curation exon 24135588 24135801 . + . Parent=GSCOCT00035249001 | |
| 49134 chr10 manual_curation CDS 24136325 24136444 . + 0 Parent=GSCOCT00035249001 | |
| 49135 chr10 manual_curation CDS 24136082 24136201 . + 0 Parent=GSCOCT00035249001 | |
| 49136 chr10 manual_curation CDS 24135760 24135801 . + 0 Parent=GSCOCT00035249001 | |
| 49137 chr10 manual_curation gene 24152790 24157511 . - . ID=GSCOCG00035247001;Name=Cc10_g13710 | |
| 49138 chr10 manual_curation mRNA 24152790 24157511 . - . ID=GSCOCT00035247001;Parent=GSCOCG00035247001;Name=Cc10_g13710 | |
| 49139 chr10 manual_curation polypeptide 24153167 24157090 . - . ID=GSCOCP00035247001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR006016,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00582,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q9C660,SwissProt:Q9LV48,SwissProt:Q9SX31,TAIR:AT1G21590.1,TAIR:AT1G77280.1,TAIR:AT5G63940.1,TrEMBL:B9H7J5,TrEMBL:B9S2T6,TrEMBL:F6H0H7;Derives_from=GSCOCT00035247001;Name=Cc10_g13710;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,GO:0006950,CC_EC_number:2.7.11.25,PRODUCT:Protein kinase protein with adenine nucleotide alpha hydrolases-like domain,CC_functional_completeness:complete,CC_gene:PERK1,CC_gene:PERK10,CC_gene:PERK9;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035247001~ Protein kinase protein with adenine nucleotide alpha hydrolases-like domain~ PERK1~ complete;original_location=join(326264..326456%2C326854..326951%2C327249..327498%2C327607..328335%2C328419..328667%2C328768..328931%2C329013..329092%2C329329..329476%2C329567..329716%2C329918..330187);owner=coffea | |
| 49140 chr10 manual_curation exon 24156898 24157511 . - . Parent=GSCOCT00035247001 | |
| 49141 chr10 manual_curation exon 24156403 24156500 . - . Parent=GSCOCT00035247001 | |
| 49142 chr10 manual_curation exon 24155856 24156105 . - . Parent=GSCOCT00035247001 | |
| 49143 chr10 manual_curation exon 24155019 24155747 . - . Parent=GSCOCT00035247001 | |
| 49144 chr10 manual_curation exon 24154687 24154935 . - . Parent=GSCOCT00035247001 | |
| 49145 chr10 manual_curation exon 24154423 24154586 . - . Parent=GSCOCT00035247001 | |
| 49146 chr10 manual_curation exon 24154262 24154341 . - . Parent=GSCOCT00035247001 | |
| 49147 chr10 manual_curation exon 24153878 24154025 . - . Parent=GSCOCT00035247001 | |
| 49148 chr10 manual_curation exon 24153638 24153787 . - . Parent=GSCOCT00035247001 | |
| 49149 chr10 manual_curation exon 24152790 24153436 . - . Parent=GSCOCT00035247001 | |
| 49150 chr10 manual_curation CDS 24156898 24157090 . - 0 Parent=GSCOCT00035247001 | |
| 49151 chr10 manual_curation CDS 24156403 24156500 . - 1 Parent=GSCOCT00035247001 | |
| 49152 chr10 manual_curation CDS 24155856 24156105 . - 0 Parent=GSCOCT00035247001 | |
| 49153 chr10 manual_curation CDS 24155019 24155747 . - 1 Parent=GSCOCT00035247001 | |
| 49154 chr10 manual_curation CDS 24154687 24154935 . - 1 Parent=GSCOCT00035247001 | |
| 49155 chr10 manual_curation CDS 24154423 24154586 . - 1 Parent=GSCOCT00035247001 | |
| 49156 chr10 manual_curation CDS 24154262 24154341 . - 0 Parent=GSCOCT00035247001 | |
| 49157 chr10 manual_curation CDS 24153878 24154025 . - 2 Parent=GSCOCT00035247001 | |
| 49158 chr10 manual_curation CDS 24153638 24153787 . - 0 Parent=GSCOCT00035247001 | |
| 49159 chr10 manual_curation CDS 24153167 24153436 . - 0 Parent=GSCOCT00035247001 | |
| 49160 chr10 manual_curation gene 24184529 24186022 . - . ID=GSCOCG00035245001;Name=Cc10_g13720 | |
| 49161 chr10 manual_curation mRNA 24184529 24186022 . - . ID=GSCOCT00035245001;Parent=GSCOCG00035245001;Name=Cc10_g13720 | |
| 49162 chr10 manual_curation polypeptide 24184529 24186022 . - . ID=GSCOCP00035245001;Dbxref=GENE3D:G3DSA:3.40.50.200,InterPro:IPR000209,SUPERFAMILY:SSF52743,SwissProt:O64495,SwissProt:Q39547,SwissProt:Q9LLL8,TAIR:AT3G46850.1,TAIR:AT5G59100.1,TAIR:AT5G59190.1,TrEMBL:A5BQI5,TrEMBL:A5CA44,TrEMBL:D7TLL0;Derives_from=GSCOCT00035245001;Name=Cc10_g13720;Ontology_term=CC_evidence_code:ISS,GO:0004252,GO:0006508,CC_EC_number:3.4.21.25,PRODUCT:Putative Cucumisin,CC_functional_completeness:fragment,CC_gene:XSP1,CC_gene:SDD1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035245001~ Putative Cucumisin~ XSP1~ fragment;original_location=join(297332..297448%2C297668..297695%2C297977..298195%2C298257..298336%2C298491..298630%2C298717..298825);owner=coffea | |
| 49163 chr10 manual_curation exon 24185906 24186022 . - . Parent=GSCOCT00035245001 | |
| 49164 chr10 manual_curation exon 24185659 24185686 . - . Parent=GSCOCT00035245001 | |
| 49165 chr10 manual_curation exon 24185159 24185377 . - . Parent=GSCOCT00035245001 | |
| 49166 chr10 manual_curation exon 24185018 24185097 . - . Parent=GSCOCT00035245001 | |
| 49167 chr10 manual_curation exon 24184724 24184863 . - . Parent=GSCOCT00035245001 | |
| 49168 chr10 manual_curation exon 24184529 24184637 . - . Parent=GSCOCT00035245001 | |
| 49169 chr10 manual_curation CDS 24185906 24186022 . - 0 Parent=GSCOCT00035245001 | |
| 49170 chr10 manual_curation CDS 24185659 24185686 . - 0 Parent=GSCOCT00035245001 | |
| 49171 chr10 manual_curation CDS 24185159 24185377 . - 1 Parent=GSCOCT00035245001 | |
| 49172 chr10 manual_curation CDS 24185018 24185097 . - 1 Parent=GSCOCT00035245001 | |
| 49173 chr10 manual_curation CDS 24184724 24184863 . - 0 Parent=GSCOCT00035245001 | |
| 49174 chr10 manual_curation CDS 24184529 24184637 . - 2 Parent=GSCOCT00035245001 | |
| 49175 chr10 manual_curation gene 24221526 24224644 . + . ID=GSCOCG00035244001;Name=Cc10_g13730 | |
| 49176 chr10 manual_curation mRNA 24221526 24224644 . + . ID=GSCOCT00035244001;Parent=GSCOCG00035244001;Name=Cc10_g13730 | |
| 49177 chr10 manual_curation polypeptide 24223523 24224644 . + . ID=GSCOCP00035244001;Dbxref=GENE3D:G3DSA:1.20.1050.10,GENE3D:G3DSA:3.40.30.10,InterPro:IPR004045,InterPro:IPR004046,InterPro:IPR010987,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR017933,PFAM:PF00043,PFAM:PF02798,PROFILE:PS50404,PROFILE:PS50405,SUPERFAMILY:SSF47616,SUPERFAMILY:SSF52833,SwissProt:O80662,SwissProt:Q03520,SwissProt:Q96MZ0,TAIR:AT1G02940.1,TAIR:AT1G77290.1,TAIR:AT2G30860.1,TrEMBL:B9H7I9,TrEMBL:B9S2T7,TrEMBL:E0CR09;Derives_from=GSCOCT00035244001;Name=Cc10_g13730;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.5.1.18,PRODUCT:Glutathione S-transferase TCHQD,CC_functional_completeness:complete,CC_gene:TCHQD,CC_gene:pcpC,CC_gene:GDAP1L1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035244001~ Glutathione S-transferase TCHQD~ TCHQD~ complete;original_location=complement(join(259623..259831%2C258710..259304));owner=coffea | |
| 49178 chr10 manual_curation exon 24221526 24221849 . + . Parent=GSCOCT00035244001 | |
| 49179 chr10 manual_curation exon 24224050 24224644 . + . Parent=GSCOCT00035244001 | |
| 49180 chr10 manual_curation exon 24223509 24223731 . + . Parent=GSCOCT00035244001 | |
| 49181 chr10 manual_curation CDS 24224050 24224644 . + 2 Parent=GSCOCT00035244001 | |
| 49182 chr10 manual_curation CDS 24223523 24223731 . + 0 Parent=GSCOCT00035244001 | |
| 49183 chr10 manual_curation gene 24225819 24243140 . - . ID=GSCOCG00035243001;Name=Cc10_g13740 | |
| 49184 chr10 manual_curation mRNA 24225819 24243140 . - . ID=GSCOCT00035243001;Parent=GSCOCG00035243001;Name=Cc10_g13740 | |
| 49185 chr10 manual_curation polypeptide 24226130 24241403 . - . ID=GSCOCP00035243001;Dbxref=InterPro:IPR001214,InterPro:IPR003616,InterPro:IPR006560,InterPro:IPR011124,PFAM:PF00856,PFAM:PF07496,PROFILE:PS50280,PROFILE:PS50868,PROFILE:PS51050,PROFILE:PS51215,SMART:SM00317,SMART:SM00570,SwissProt:Q2LAE1,SwissProt:Q84WW6,SwissProt:Q9BYW2,TAIR:AT1G76710.1,TAIR:AT1G77300.1,TAIR:AT4G30860.1,TrEMBL:B9S2T8,TrEMBL:F6H0H8,TrEMBL:I1KAE8;Derives_from=GSCOCT00035243001;Name=Cc10_g13740;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0008270,GO:0018024,CC_EC_number:2.1.1.43,PRODUCT:Putative Histone-lysine N-methyltransferase ASHH2,CC_functional_completeness:fragment,CC_gene:ASHH2,CC_gene:SETD2,CC_gene:ASHH1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035243001~ Putative Histone-lysine N-methyltransferase ASHH2~ ASHH2~ fragment;original_location=join(241951..242221%2C242330..243190%2C243497..243754%2C243973..244162%2C246806..246975%2C247093..247172%2C247376..247507%2C247608..247724%2C248206..248298%2C249850..249927%2C251072..251128%2C251640..252420%2C252497..252552%2C253081..253160%2C253256..253338%2C253475..253554%2C254051..254130%2C255216..255261%2C256184..257224);owner=coffea | |
| 49186 chr10 manual_curation exon 24242884 24243140 . - . Parent=GSCOCT00035243001 | |
| 49187 chr10 manual_curation exon 24241133 24241529 . - . Parent=GSCOCT00035243001 | |
| 49188 chr10 manual_curation exon 24240164 24241024 . - . Parent=GSCOCT00035243001 | |
| 49189 chr10 manual_curation exon 24239600 24239857 . - . Parent=GSCOCT00035243001 | |
| 49190 chr10 manual_curation exon 24239192 24239381 . - . Parent=GSCOCT00035243001 | |
| 49191 chr10 manual_curation exon 24236379 24236548 . - . Parent=GSCOCT00035243001 | |
| 49192 chr10 manual_curation exon 24236182 24236261 . - . Parent=GSCOCT00035243001 | |
| 49193 chr10 manual_curation exon 24235847 24235978 . - . Parent=GSCOCT00035243001 | |
| 49194 chr10 manual_curation exon 24235630 24235746 . - . Parent=GSCOCT00035243001 | |
| 49195 chr10 manual_curation exon 24235056 24235148 . - . Parent=GSCOCT00035243001 | |
| 49196 chr10 manual_curation exon 24233427 24233504 . - . Parent=GSCOCT00035243001 | |
| 49197 chr10 manual_curation exon 24232226 24232282 . - . Parent=GSCOCT00035243001 | |
| 49198 chr10 manual_curation exon 24230934 24231714 . - . Parent=GSCOCT00035243001 | |
| 49199 chr10 manual_curation exon 24230802 24230857 . - . Parent=GSCOCT00035243001 | |
| 49200 chr10 manual_curation exon 24230194 24230273 . - . Parent=GSCOCT00035243001 | |
| 49201 chr10 manual_curation exon 24230016 24230098 . - . Parent=GSCOCT00035243001 | |
| 49202 chr10 manual_curation exon 24229800 24229879 . - . Parent=GSCOCT00035243001 | |
| 49203 chr10 manual_curation exon 24229224 24229303 . - . Parent=GSCOCT00035243001 | |
| 49204 chr10 manual_curation exon 24228093 24228138 . - . Parent=GSCOCT00035243001 | |
| 49205 chr10 manual_curation exon 24225819 24227170 . - . Parent=GSCOCT00035243001 | |
| 49206 chr10 manual_curation CDS 24241133 24241403 . - 0 Parent=GSCOCT00035243001 | |
| 49207 chr10 manual_curation CDS 24240164 24241024 . - 1 Parent=GSCOCT00035243001 | |
| 49208 chr10 manual_curation CDS 24239600 24239857 . - 1 Parent=GSCOCT00035243001 | |
| 49209 chr10 manual_curation CDS 24239192 24239381 . - 1 Parent=GSCOCT00035243001 | |
| 49210 chr10 manual_curation CDS 24236379 24236548 . - 2 Parent=GSCOCT00035243001 | |
| 49211 chr10 manual_curation CDS 24236182 24236261 . - 1 Parent=GSCOCT00035243001 | |
| 49212 chr10 manual_curation CDS 24235847 24235978 . - 0 Parent=GSCOCT00035243001 | |
| 49213 chr10 manual_curation CDS 24235630 24235746 . - 0 Parent=GSCOCT00035243001 | |
| 49214 chr10 manual_curation CDS 24235056 24235148 . - 0 Parent=GSCOCT00035243001 | |
| 49215 chr10 manual_curation CDS 24233427 24233504 . - 0 Parent=GSCOCT00035243001 | |
| 49216 chr10 manual_curation CDS 24232226 24232282 . - 0 Parent=GSCOCT00035243001 | |
| 49217 chr10 manual_curation CDS 24230934 24231714 . - 0 Parent=GSCOCT00035243001 | |
| 49218 chr10 manual_curation CDS 24230802 24230857 . - 1 Parent=GSCOCT00035243001 | |
| 49219 chr10 manual_curation CDS 24230194 24230273 . - 0 Parent=GSCOCT00035243001 | |
| 49220 chr10 manual_curation CDS 24230016 24230098 . - 2 Parent=GSCOCT00035243001 | |
| 49221 chr10 manual_curation CDS 24229800 24229879 . - 1 Parent=GSCOCT00035243001 | |
| 49222 chr10 manual_curation CDS 24229224 24229303 . - 0 Parent=GSCOCT00035243001 | |
| 49223 chr10 manual_curation CDS 24228093 24228138 . - 2 Parent=GSCOCT00035243001 | |
| 49224 chr10 manual_curation CDS 24226130 24227170 . - 0 Parent=GSCOCT00035243001 | |
| 49225 chr10 manual_curation gene 24250667 24253266 . - . ID=GSCOCG00035242001;Name=Cc10_g13750 | |
| 49226 chr10 manual_curation mRNA 24250667 24253266 . - . ID=GSCOCT00035242001;Parent=GSCOCG00035242001;Name=Cc10_g13750 | |
| 49227 chr10 manual_curation polypeptide 24250920 24253266 . - . ID=GSCOCP00035242001;Dbxref=InterPro:IPR002100,InterPro:IPR002487,PFAM:PF00319,PFAM:PF01486,PRINTS:PR00404,PROFILE:PS50066,PROFILE:PS51297,PROSITE:PS00350,SMART:SM00432,SUPERFAMILY:SSF55455,SwissProt:Q03378,SwissProt:Q03416,SwissProt:Q07474,TAIR:AT3G54340.1,TAIR:AT5G20240.1,TAIR:AT5G23260.2,TrEMBL:E9JTW3,TrEMBL:E9JTW4,TrEMBL:G3EIU5;Derives_from=GSCOCT00035242001;Name=Cc10_g13750;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0005634,GO:0043565,CC_EC_number:missing_EC_number,PRODUCT:Floral homeotic protein PMADS 2,CC_functional_completeness:complete,CC_gene:PMADS2,CC_gene:GLO;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035242001~ Floral homeotic protein PMADS 2~ PMADS2~ complete;original_location=join(230088..230275%2C230395..230461%2C231064..231125%2C231242..231290%2C231429..231458%2C231680..231724%2C232294..232434);owner=coffea | |
| 49228 chr10 manual_curation exon 24253079 24253266 . - . Parent=GSCOCT00035242001 | |
| 49229 chr10 manual_curation exon 24252893 24252959 . - . Parent=GSCOCT00035242001 | |
| 49230 chr10 manual_curation exon 24252229 24252290 . - . Parent=GSCOCT00035242001 | |
| 49231 chr10 manual_curation exon 24252064 24252112 . - . Parent=GSCOCT00035242001 | |
| 49232 chr10 manual_curation exon 24251896 24251925 . - . Parent=GSCOCT00035242001 | |
| 49233 chr10 manual_curation exon 24251630 24251674 . - . Parent=GSCOCT00035242001 | |
| 49234 chr10 manual_curation exon 24250667 24251060 . - . Parent=GSCOCT00035242001 | |
| 49235 chr10 manual_curation CDS 24253079 24253266 . - 0 Parent=GSCOCT00035242001 | |
| 49236 chr10 manual_curation CDS 24252893 24252959 . - 2 Parent=GSCOCT00035242001 | |
| 49237 chr10 manual_curation CDS 24252229 24252290 . - 0 Parent=GSCOCT00035242001 | |
| 49238 chr10 manual_curation CDS 24252064 24252112 . - 2 Parent=GSCOCT00035242001 | |
| 49239 chr10 manual_curation CDS 24251896 24251925 . - 0 Parent=GSCOCT00035242001 | |
| 49240 chr10 manual_curation CDS 24251630 24251674 . - 0 Parent=GSCOCT00035242001 | |
| 49241 chr10 manual_curation CDS 24250920 24251060 . - 0 Parent=GSCOCT00035242001 | |
| 49242 chr10 manual_curation gene 24295091 24300207 . - . ID=GSCOCG00035239001;Name=Cc10_g13760 | |
| 49243 chr10 manual_curation mRNA 24295091 24300207 . - . ID=GSCOCT00035239001;Parent=GSCOCG00035239001;Name=Cc10_g13760 | |
| 49244 chr10 manual_curation polypeptide 24295811 24299204 . - . ID=GSCOCP00035239001;Dbxref=TAIR:AT1G21600.1,TrEMBL:B9S2U0,TrEMBL:D7KK29,TrEMBL:E6NU80;Derives_from=GSCOCT00035239001;Name=Cc10_g13760;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:plastid transcriptionally active 6,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035239001~ plastid transcriptionally active 6~ unknown_gene~ complete;original_location=join(184150..184635%2C185049..185117%2C185326..185430%2C186897..187016%2C187251..187340%2C187427..187543);owner=coffea | |
| 49245 chr10 manual_curation exon 24298719 24300207 . - . Parent=GSCOCT00035239001 | |
| 49246 chr10 manual_curation exon 24298237 24298305 . - . Parent=GSCOCT00035239001 | |
| 49247 chr10 manual_curation exon 24297924 24298028 . - . Parent=GSCOCT00035239001 | |
| 49248 chr10 manual_curation exon 24296338 24296457 . - . Parent=GSCOCT00035239001 | |
| 49249 chr10 manual_curation exon 24296014 24296103 . - . Parent=GSCOCT00035239001 | |
| 49250 chr10 manual_curation exon 24295091 24295927 . - . Parent=GSCOCT00035239001 | |
| 49251 chr10 manual_curation CDS 24298719 24299204 . - 0 Parent=GSCOCT00035239001 | |
| 49252 chr10 manual_curation CDS 24298237 24298305 . - 0 Parent=GSCOCT00035239001 | |
| 49253 chr10 manual_curation CDS 24297924 24298028 . - 0 Parent=GSCOCT00035239001 | |
| 49254 chr10 manual_curation CDS 24296338 24296457 . - 0 Parent=GSCOCT00035239001 | |
| 49255 chr10 manual_curation CDS 24296014 24296103 . - 0 Parent=GSCOCT00035239001 | |
| 49256 chr10 manual_curation CDS 24295811 24295927 . - 0 Parent=GSCOCT00035239001 | |
| 49257 chr10 manual_curation gene 24300275 24301863 . - . ID=GSCOCG00035238001;Name=Cc10_g13770 | |
| 49258 chr10 manual_curation mRNA 24300275 24301863 . - . ID=GSCOCT00035238001;Parent=GSCOCG00035238001;Name=Cc10_g13770 | |
| 49259 chr10 manual_curation polypeptide 24300275 24300544 . - . ID=GSCOCP00035238001;Derives_from=GSCOCT00035238001;Name=Cc10_g13770;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035238001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=182810..183079;owner=coffea | |
| 49260 chr10 manual_curation exon 24300275 24301863 . - . Parent=GSCOCT00035238001 | |
| 49261 chr10 manual_curation CDS 24300275 24300544 . - 0 Parent=GSCOCT00035238001 | |
| 49262 chr10 manual_curation gene 24306186 24315057 . + . ID=GSCOCG00035237001;Name=Cc10_g13780 | |
| 49263 chr10 manual_curation mRNA 24306186 24315057 . + . ID=GSCOCT00035237001;Parent=GSCOCG00035237001;Name=Cc10_g13780 | |
| 49264 chr10 manual_curation polypeptide 24306704 24314470 . + . ID=GSCOCP00035237001;Dbxref=InterPro:IPR019378,PFAM:PF10250,SwissProt:Q8W486,TAIR:AT1G04910.1,TAIR:AT3G03810.1,TAIR:AT3G30300.1,TrEMBL:D7L1A3,TrEMBL:D7T466,TrEMBL:F4J2C8;Derives_from=GSCOCT00035237001;Name=Cc10_g13780;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:O-fucosyltransferase family protein,CC_functional_completeness:complete,CC_gene:At1g04910;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035237001~ O-fucosyltransferase family protein~ At1g04910~ complete;original_location=complement(join(176483..176650%2C176312..176396%2C175630..175700%2C175438..175526%2C175111..175354%2C173043..173155%2C172315..172405%2C171900..172028%2C169850..170403%2C168884..169322));owner=coffea | |
| 49265 chr10 manual_curation exon 24306186 24306554 . + . Parent=GSCOCT00035237001 | |
| 49266 chr10 manual_curation exon 24314032 24315057 . + . Parent=GSCOCT00035237001 | |
| 49267 chr10 manual_curation exon 24312951 24313504 . + . Parent=GSCOCT00035237001 | |
| 49268 chr10 manual_curation exon 24311326 24311454 . + . Parent=GSCOCT00035237001 | |
| 49269 chr10 manual_curation exon 24310949 24311039 . + . Parent=GSCOCT00035237001 | |
| 49270 chr10 manual_curation exon 24310199 24310311 . + . Parent=GSCOCT00035237001 | |
| 49271 chr10 manual_curation exon 24308000 24308243 . + . Parent=GSCOCT00035237001 | |
| 49272 chr10 manual_curation exon 24307828 24307916 . + . Parent=GSCOCT00035237001 | |
| 49273 chr10 manual_curation exon 24307654 24307724 . + . Parent=GSCOCT00035237001 | |
| 49274 chr10 manual_curation exon 24306958 24307042 . + . Parent=GSCOCT00035237001 | |
| 49275 chr10 manual_curation exon 24306667 24306871 . + . Parent=GSCOCT00035237001 | |
| 49276 chr10 manual_curation CDS 24314032 24314470 . + 2 Parent=GSCOCT00035237001 | |
| 49277 chr10 manual_curation CDS 24312951 24313504 . + 0 Parent=GSCOCT00035237001 | |
| 49278 chr10 manual_curation CDS 24311326 24311454 . + 0 Parent=GSCOCT00035237001 | |
| 49279 chr10 manual_curation CDS 24310949 24311039 . + 2 Parent=GSCOCT00035237001 | |
| 49280 chr10 manual_curation CDS 24310199 24310311 . + 0 Parent=GSCOCT00035237001 | |
| 49281 chr10 manual_curation CDS 24308000 24308243 . + 2 Parent=GSCOCT00035237001 | |
| 49282 chr10 manual_curation CDS 24307828 24307916 . + 0 Parent=GSCOCT00035237001 | |
| 49283 chr10 manual_curation CDS 24307654 24307724 . + 1 Parent=GSCOCT00035237001 | |
| 49284 chr10 manual_curation CDS 24306958 24307042 . + 0 Parent=GSCOCT00035237001 | |
| 49285 chr10 manual_curation CDS 24306704 24306871 . + 0 Parent=GSCOCT00035237001 | |
| 49286 chr10 manual_curation gene 24325248 24326048 . + . ID=GSCOCG00035235001;Name=Cc10_g13790 | |
| 49287 chr10 manual_curation mRNA 24325248 24326048 . + . ID=GSCOCT00035235001;Parent=GSCOCG00035235001;Name=Cc10_g13790 | |
| 49288 chr10 manual_curation polypeptide 24325248 24326048 . + . ID=GSCOCP00035235001;Dbxref=InterPro:IPR000073,PFAM:PF00561,SwissProt:A2WYS8,SwissProt:Q0JG98,SwissProt:Q9SE93,TAIR:AT2G23590.1,TAIR:AT2G23610.1,TAIR:AT2G23620.1,TrEMBL:B9HRV8,TrEMBL:B9S8N3,TrEMBL:F6HQF1;Derives_from=GSCOCT00035235001;Name=Cc10_g13790;Ontology_term=CC_evidence_code:ISS,CC_EC_number:3.1.1.78,PRODUCT:Putative Polyneuridine-aldehyde esterase,CC_functional_completeness:complete,CC_gene:PNAE,CC_gene:PIR7A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035235001~ Putative Polyneuridine-aldehyde esterase~ PNAE~ complete;original_location=complement(157306..158106);owner=coffea | |
| 49289 chr10 manual_curation exon 24325248 24326048 . + . Parent=GSCOCT00035235001 | |
| 49290 chr10 manual_curation CDS 24325248 24326048 . + 0 Parent=GSCOCT00035235001 | |
| 49291 chr10 manual_curation gene 24343366 24344752 . - . ID=GSCOCG00035234001;Name=Cc10_g13800 | |
| 49292 chr10 manual_curation mRNA 24343366 24344752 . - . ID=GSCOCT00035234001;Parent=GSCOCG00035234001;Name=Cc10_g13800 | |
| 49293 chr10 manual_curation polypeptide 24344307 24344525 . - . ID=GSCOCP00035234001;Derives_from=GSCOCT00035234001;Name=Cc10_g13800;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035234001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=138829..139047;owner=coffea | |
| 49294 chr10 manual_curation exon 24343366 24344752 . - . Parent=GSCOCT00035234001 | |
| 49295 chr10 manual_curation CDS 24344307 24344525 . - 0 Parent=GSCOCT00035234001 | |
| 49296 chr10 manual_curation gene 24348272 24349315 . + . ID=GSCOCG00035233001;Name=Cc10_g13810 | |
| 49297 chr10 manual_curation mRNA 24348272 24349315 . + . ID=GSCOCT00035233001;Parent=GSCOCG00035233001;Name=Cc10_g13810 | |
| 49298 chr10 manual_curation polypeptide 24348272 24349315 . + . ID=GSCOCP00035233001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR011009,InterPro:IPR020635,PFAM:PF07714,PROFILE:PS50011,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:O64798,SwissProt:O80795,SwissProt:Q9S9M3,TAIR:AT3G57700.1,TAIR:AT3G57710.1,TAIR:AT3G57750.1,TrEMBL:B9RF72,TrEMBL:Q56YF3,TrEMBL:Q9SVY5;Derives_from=GSCOCT00035233001;Name=Cc10_g13810;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Inactive serine/threonine-protein kinase At1g67470,CC_functional_completeness:complete,CC_gene:At1g67470,CC_gene:At1g65250,CC_gene:WAKL3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035233001~ Putative Inactive serine/threonine-protein kinase At1g67470~ At1g67470~ complete;original_location=complement(134039..135082);owner=coffea | |
| 49299 chr10 manual_curation exon 24348272 24349315 . + . Parent=GSCOCT00035233001 | |
| 49300 chr10 manual_curation CDS 24348272 24349315 . + 0 Parent=GSCOCT00035233001 | |
| 49301 chr10 manual_curation gene 24353498 24353844 . - . ID=GSCOCG00035232001;Name=Cc10_g13820 | |
| 49302 chr10 manual_curation mRNA 24353498 24353844 . - . ID=GSCOCT00035232001;Parent=GSCOCG00035232001;Name=Cc10_g13820 | |
| 49303 chr10 manual_curation polypeptide 24353713 24353844 . - . ID=GSCOCP00035232001;Dbxref=InterPro:IPR004162,PANTHER:PTHR10315,TAIR:AT5G53360.1;Derives_from=GSCOCT00035232001;Name=Cc10_g13820;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0006511,GO:0007275,CC_EC_number:missing_EC_number,PRODUCT:TRAF-like superfamily protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035232001~ TRAF-like superfamily protein~ unknown_gene~ fragment;original_location=129510..129641;owner=coffea | |
| 49304 chr10 manual_curation exon 24353498 24353844 . - . Parent=GSCOCT00035232001 | |
| 49305 chr10 manual_curation CDS 24353713 24353844 . - 0 Parent=GSCOCT00035232001 | |
| 49306 chr10 manual_curation gene 24353994 24356531 . - . ID=GSCOCG00035231001;Name=Cc10_g13830 | |
| 49307 chr10 manual_curation mRNA 24353994 24356531 . - . ID=GSCOCT00035231001;Parent=GSCOCG00035231001;Name=Cc10_g13830 | |
| 49308 chr10 manual_curation polypeptide 24354750 24355932 . - . ID=GSCOCP00035231001;Dbxref=InterPro:IPR004162,PANTHER:PTHR10315,SwissProt:Q84JL3,SwissProt:Q8S3N1,SwissProt:Q9STN8,TAIR:AT2G41980.1,TAIR:AT3G61790.1,TAIR:AT4G27880.1,TrEMBL:D7TVH7,TrEMBL:Q5NAX7,TrEMBL:Q9XGC2;Derives_from=GSCOCT00035231001;Name=Cc10_g13830;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0006511,GO:0007275,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:SINAT4,CC_gene:SINAT3,CC_gene:SINAT5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035231001~ Hypothetical protein~ SINAT4~ missing_functional_completeness;original_location=join(127422..127451%2C128434..128604);owner=coffea | |
| 49309 chr10 manual_curation exon 24355903 24356531 . - . Parent=GSCOCT00035231001 | |
| 49310 chr10 manual_curation exon 24353994 24354920 . - . Parent=GSCOCT00035231001 | |
| 49311 chr10 manual_curation CDS 24355903 24355932 . - 0 Parent=GSCOCT00035231001 | |
| 49312 chr10 manual_curation CDS 24354750 24354920 . - 0 Parent=GSCOCT00035231001 | |
| 49313 chr10 manual_curation gene 24356600 24359425 . - . ID=GSCOCG00035230001;Name=Cc10_g13840 | |
| 49314 chr10 manual_curation mRNA 24356600 24359425 . - . ID=GSCOCT00035230001;Parent=GSCOCG00035230001;Name=Cc10_g13840 | |
| 49315 chr10 manual_curation polypeptide 24356600 24359425 . - . ID=GSCOCP00035230001;Dbxref=InterPro:IPR008942,SUPERFAMILY:SSF48464,SwissProt:E1C760,SwissProt:E7EXT2,SwissProt:Q9M358,TAIR:AT3G61800.1,TrEMBL:A5AKV8,TrEMBL:F6I6E6,TrEMBL:I1JS03;Derives_from=GSCOCT00035230001;Name=Cc10_g13840;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:At3g61800,CC_gene:uvssa,CC_gene:UVSSA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035230001~ Putative uncharacterized protein~ At3g61800~ fragment;original_location=join(123929..124258%2C125656..126596%2C126691..126754);owner=coffea | |
| 49316 chr10 manual_curation exon 24359096 24359425 . - . Parent=GSCOCT00035230001 | |
| 49317 chr10 manual_curation exon 24356758 24357698 . - . Parent=GSCOCT00035230001 | |
| 49318 chr10 manual_curation exon 24356600 24356663 . - . Parent=GSCOCT00035230001 | |
| 49319 chr10 manual_curation CDS 24359096 24359425 . - 0 Parent=GSCOCT00035230001 | |
| 49320 chr10 manual_curation CDS 24356758 24357698 . - 0 Parent=GSCOCT00035230001 | |
| 49321 chr10 manual_curation CDS 24356600 24356663 . - 2 Parent=GSCOCT00035230001 | |
| 49322 chr10 manual_curation gene 24360521 24367116 . + . ID=GSCOCG00035229001;Name=Cc10_g13850 | |
| 49323 chr10 manual_curation mRNA 24360521 24367116 . + . ID=GSCOCT00035229001;Parent=GSCOCG00035229001;Name=Cc10_g13850 | |
| 49324 chr10 manual_curation polypeptide 24360521 24367116 . + . ID=GSCOCP00035229001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR011009,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF07714,PROFILE:PS50011,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:O64798,SwissProt:O80795,SwissProt:Q9LMT9,TAIR:AT3G57710.1,TAIR:AT3G57730.1,TAIR:AT3G57750.1,TrEMBL:B9H4L9,TrEMBL:F6H0G0,TrEMBL:F6HMY2;Derives_from=GSCOCT00035229001;Name=Cc10_g13850;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.10.2,PRODUCT:Putative Probable inactive receptor-like protein kinase At1g65250,CC_functional_completeness:complete,CC_gene:At1g65250,CC_gene:WAKL13,CC_gene:At1g67470;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035229001~ Putative Probable inactive receptor-like protein kinase At1g65250~ At1g65250~ complete;original_location=complement(join(121923..122833%2C119348..119573%2C117459..117548%2C116238..117314));owner=coffea | |
| 49325 chr10 manual_curation exon 24366040 24367116 . + . Parent=GSCOCT00035229001 | |
| 49326 chr10 manual_curation exon 24365806 24365895 . + . Parent=GSCOCT00035229001 | |
| 49327 chr10 manual_curation exon 24363781 24364006 . + . Parent=GSCOCT00035229001 | |
| 49328 chr10 manual_curation exon 24360521 24361431 . + . Parent=GSCOCT00035229001 | |
| 49329 chr10 manual_curation CDS 24366040 24367116 . + 0 Parent=GSCOCT00035229001 | |
| 49330 chr10 manual_curation CDS 24365806 24365895 . + 0 Parent=GSCOCT00035229001 | |
| 49331 chr10 manual_curation CDS 24363781 24364006 . + 2 Parent=GSCOCT00035229001 | |
| 49332 chr10 manual_curation CDS 24360521 24361431 . + 0 Parent=GSCOCT00035229001 | |
| 49333 chr10 manual_curation gene 24387584 24388680 . + . ID=GSCOCG00035227001;Name=Cc10_g13860 | |
| 49334 chr10 manual_curation mRNA 24387584 24388680 . + . ID=GSCOCT00035227001;Parent=GSCOCG00035227001;Name=Cc10_g13860 | |
| 49335 chr10 manual_curation polypeptide 24387584 24388542 . + . ID=GSCOCP00035227001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR011009,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q39191,SwissProt:Q9LMN7,SwissProt:Q9LMP1,TAIR:AT3G57700.1,TAIR:AT3G57710.1,TAIR:AT3G57750.1,TrEMBL:B9RF73,TrEMBL:B9T1H9,TrEMBL:Q9SVY9;Derives_from=GSCOCT00035227001;Name=Cc10_g13860;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Wall-associated receptor kinase 1,CC_functional_completeness:fragment,CC_gene:WAK1,CC_gene:WAK2,CC_gene:WAK5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035227001~ Putative Wall-associated receptor kinase 1~ WAK1~ fragment;original_location=complement(join(94973..95770%2C94812..94904));owner=coffea | |
| 49336 chr10 manual_curation exon 24388450 24388680 . + . Parent=GSCOCT00035227001 | |
| 49337 chr10 manual_curation exon 24387584 24388381 . + . Parent=GSCOCT00035227001 | |
| 49338 chr10 manual_curation CDS 24388450 24388542 . + 0 Parent=GSCOCT00035227001 | |
| 49339 chr10 manual_curation CDS 24387584 24388381 . + 0 Parent=GSCOCT00035227001 | |
| 49340 chr10 manual_curation gene 24391136 24395824 . - . ID=GSCOCG00035226001;Name=Cc10_g13870 | |
| 49341 chr10 manual_curation mRNA 24391136 24395824 . - . ID=GSCOCT00035226001;Parent=GSCOCG00035226001;Name=Cc10_g13870 | |
| 49342 chr10 manual_curation polypeptide 24391633 24395824 . - . ID=GSCOCP00035226001;Dbxref=InterPro:IPR000595,InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR011009,InterPro:IPR020635,PFAM:PF07714,PROFILE:PS50011,PROFILE:PS50042,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:C0LGK4,SwissProt:P27450,SwissProt:P43293,TAIR:AT2G16250.1,TAIR:AT2G17220.1,TAIR:AT4G39270.1,TrEMBL:B9HPX8,TrEMBL:B9MYZ9,TrEMBL:D7L8T0;Derives_from=GSCOCT00035226001;Name=Cc10_g13870;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.10.2,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At2g16250,CC_functional_completeness:fragment,CC_gene:At2g16250,CC_gene:NAK,CC_gene:At4g35600;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035226001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At2g16250~ At2g16250~ fragment;original_location=join(87530..88155%2C88258..88372%2C88834..88861%2C89374..89799%2C89873..90192%2C90495..90627%2C90734..90876%2C91088..91229%2C91408..91721);owner=coffea | |
| 49343 chr10 manual_curation exon 24395199 24395824 . - . Parent=GSCOCT00035226001 | |
| 49344 chr10 manual_curation exon 24394982 24395096 . - . Parent=GSCOCT00035226001 | |
| 49345 chr10 manual_curation exon 24394493 24394520 . - . Parent=GSCOCT00035226001 | |
| 49346 chr10 manual_curation exon 24393555 24393980 . - . Parent=GSCOCT00035226001 | |
| 49347 chr10 manual_curation exon 24393162 24393481 . - . Parent=GSCOCT00035226001 | |
| 49348 chr10 manual_curation exon 24392727 24392859 . - . Parent=GSCOCT00035226001 | |
| 49349 chr10 manual_curation exon 24392478 24392620 . - . Parent=GSCOCT00035226001 | |
| 49350 chr10 manual_curation exon 24392125 24392266 . - . Parent=GSCOCT00035226001 | |
| 49351 chr10 manual_curation exon 24391136 24391946 . - . Parent=GSCOCT00035226001 | |
| 49352 chr10 manual_curation CDS 24395199 24395824 . - 0 Parent=GSCOCT00035226001 | |
| 49353 chr10 manual_curation CDS 24394982 24395096 . - 2 Parent=GSCOCT00035226001 | |
| 49354 chr10 manual_curation CDS 24394493 24394520 . - 0 Parent=GSCOCT00035226001 | |
| 49355 chr10 manual_curation CDS 24393555 24393980 . - 1 Parent=GSCOCT00035226001 | |
| 49356 chr10 manual_curation CDS 24393162 24393481 . - 1 Parent=GSCOCT00035226001 | |
| 49357 chr10 manual_curation CDS 24392727 24392859 . - 0 Parent=GSCOCT00035226001 | |
| 49358 chr10 manual_curation CDS 24392478 24392620 . - 1 Parent=GSCOCT00035226001 | |
| 49359 chr10 manual_curation CDS 24392125 24392266 . - 0 Parent=GSCOCT00035226001 | |
| 49360 chr10 manual_curation CDS 24391633 24391946 . - 1 Parent=GSCOCT00035226001 | |
| 49361 chr10 manual_curation gene 24400251 24401244 . + . ID=GSCOCG00035225001;Name=Cc10_g13880 | |
| 49362 chr10 manual_curation mRNA 24400251 24401244 . + . ID=GSCOCT00035225001;Parent=GSCOCG00035225001;Name=Cc10_g13880 | |
| 49363 chr10 manual_curation polypeptide 24400251 24401209 . + . ID=GSCOCP00035225001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR011009,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q39191,SwissProt:Q9LMP1,SwissProt:Q9SA25,TAIR:AT3G57710.1,TAIR:AT3G57730.1,TAIR:AT3G57750.1,TrEMBL:B9RF73,TrEMBL:B9T1H9,TrEMBL:Q9SVY9;Derives_from=GSCOCT00035225001;Name=Cc10_g13880;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Wall-associated receptor kinase 2,CC_functional_completeness:fragment,CC_gene:WAK2,CC_gene:WAK1,CC_gene:WAKL8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035225001~ Putative Wall-associated receptor kinase 2~ WAK2~ fragment;original_location=complement(join(82306..83103%2C82145..82237));owner=coffea | |
| 49364 chr10 manual_curation exon 24401117 24401244 . + . Parent=GSCOCT00035225001 | |
| 49365 chr10 manual_curation exon 24400251 24401048 . + . Parent=GSCOCT00035225001 | |
| 49366 chr10 manual_curation CDS 24401117 24401209 . + 0 Parent=GSCOCT00035225001 | |
| 49367 chr10 manual_curation CDS 24400251 24401048 . + 0 Parent=GSCOCT00035225001 | |
| 49368 chr10 manual_curation gene 24405187 24409848 . - . ID=GSCOCG00035224001;Name=Cc10_g13890 | |
| 49369 chr10 manual_curation mRNA 24405187 24409848 . - . ID=GSCOCT00035224001;Parent=GSCOCG00035224001;Name=Cc10_g13890 | |
| 49370 chr10 manual_curation polypeptide 24405681 24409848 . - . ID=GSCOCP00035224001;Dbxref=InterPro:IPR000595,InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR011009,InterPro:IPR020635,PFAM:PF07714,PROFILE:PS50011,PROFILE:PS50042,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:C0LGK4,SwissProt:P27450,SwissProt:P43293,TAIR:AT2G16250.1,TAIR:AT2G17220.1,TAIR:AT4G39270.1,TrEMBL:A5AY74,TrEMBL:D7L8T0,TrEMBL:F6H047;Derives_from=GSCOCT00035224001;Name=Cc10_g13890;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.10.2,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At2g16250,CC_functional_completeness:fragment,CC_gene:At2g16250,CC_gene:NAK,CC_gene:At4g35600;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035224001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At2g16250~ At2g16250~ fragment;original_location=join(73506..74131%2C74235..74342%2C74792..74814%2C75329..75754%2C75829..76148%2C76458..76590%2C76697..76839%2C77039..77168%2C77324..77673);owner=coffea | |
| 49371 chr10 manual_curation exon 24409223 24409848 . - . Parent=GSCOCT00035224001 | |
| 49372 chr10 manual_curation exon 24409012 24409119 . - . Parent=GSCOCT00035224001 | |
| 49373 chr10 manual_curation exon 24408540 24408562 . - . Parent=GSCOCT00035224001 | |
| 49374 chr10 manual_curation exon 24407600 24408025 . - . Parent=GSCOCT00035224001 | |
| 49375 chr10 manual_curation exon 24407206 24407525 . - . Parent=GSCOCT00035224001 | |
| 49376 chr10 manual_curation exon 24406764 24406896 . - . Parent=GSCOCT00035224001 | |
| 49377 chr10 manual_curation exon 24406515 24406657 . - . Parent=GSCOCT00035224001 | |
| 49378 chr10 manual_curation exon 24406186 24406315 . - . Parent=GSCOCT00035224001 | |
| 49379 chr10 manual_curation exon 24405187 24406030 . - . Parent=GSCOCT00035224001 | |
| 49380 chr10 manual_curation CDS 24409223 24409848 . - 0 Parent=GSCOCT00035224001 | |
| 49381 chr10 manual_curation CDS 24409012 24409119 . - 2 Parent=GSCOCT00035224001 | |
| 49382 chr10 manual_curation CDS 24408540 24408562 . - 2 Parent=GSCOCT00035224001 | |
| 49383 chr10 manual_curation CDS 24407600 24408025 . - 1 Parent=GSCOCT00035224001 | |
| 49384 chr10 manual_curation CDS 24407206 24407525 . - 1 Parent=GSCOCT00035224001 | |
| 49385 chr10 manual_curation CDS 24406764 24406896 . - 0 Parent=GSCOCT00035224001 | |
| 49386 chr10 manual_curation CDS 24406515 24406657 . - 1 Parent=GSCOCT00035224001 | |
| 49387 chr10 manual_curation CDS 24406186 24406315 . - 0 Parent=GSCOCT00035224001 | |
| 49388 chr10 manual_curation CDS 24405681 24406030 . - 1 Parent=GSCOCT00035224001 | |
| 49389 chr10 manual_curation gene 24416813 24421746 . - . ID=GSCOCG00035223001;Name=Cc10_g13900 | |
| 49390 chr10 manual_curation mRNA 24416813 24421746 . - . ID=GSCOCT00035223001;Parent=GSCOCG00035223001;Name=Cc10_g13900 | |
| 49391 chr10 manual_curation polypeptide 24417016 24421746 . - . ID=GSCOCP00035223001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR011009,InterPro:IPR020635,PFAM:PF07714,PROFILE:PS50011,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:P27450,SwissProt:P43293,SwissProt:P46573,TAIR:AT2G17220.1,TAIR:AT2G28930.1,TAIR:AT5G02290.1,TrEMBL:B9SMD4,TrEMBL:D7L8T0,TrEMBL:Q9SII6;Derives_from=GSCOCT00035223001;Name=Cc10_g13900;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable serine/threonine-protein kinase NAK,CC_functional_completeness:complete,CC_gene:NAK,CC_gene:APK1B,CC_gene:At4g35600;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035223001~ Putative Probable serine/threonine-protein kinase NAK~ NAK~ complete;original_location=join(61608..61768%2C61874..61990%2C62423..62457%2C63486..63530%2C63617..64042%2C64116..64435%2C64732..64794%2C65079..65211%2C65306..65448%2C65653..65782%2C65971..66338);owner=coffea | |
| 49392 chr10 manual_curation exon 24421586 24421746 . - . Parent=GSCOCT00035223001 | |
| 49393 chr10 manual_curation exon 24421364 24421480 . - . Parent=GSCOCT00035223001 | |
| 49394 chr10 manual_curation exon 24420897 24420931 . - . Parent=GSCOCT00035223001 | |
| 49395 chr10 manual_curation exon 24419824 24419868 . - . Parent=GSCOCT00035223001 | |
| 49396 chr10 manual_curation exon 24419312 24419737 . - . Parent=GSCOCT00035223001 | |
| 49397 chr10 manual_curation exon 24418919 24419238 . - . Parent=GSCOCT00035223001 | |
| 49398 chr10 manual_curation exon 24418560 24418622 . - . Parent=GSCOCT00035223001 | |
| 49399 chr10 manual_curation exon 24418143 24418275 . - . Parent=GSCOCT00035223001 | |
| 49400 chr10 manual_curation exon 24417906 24418048 . - . Parent=GSCOCT00035223001 | |
| 49401 chr10 manual_curation exon 24417572 24417701 . - . Parent=GSCOCT00035223001 | |
| 49402 chr10 manual_curation exon 24416813 24417383 . - . Parent=GSCOCT00035223001 | |
| 49403 chr10 manual_curation CDS 24421586 24421746 . - 0 Parent=GSCOCT00035223001 | |
| 49404 chr10 manual_curation CDS 24421364 24421480 . - 2 Parent=GSCOCT00035223001 | |
| 49405 chr10 manual_curation CDS 24420897 24420931 . - 2 Parent=GSCOCT00035223001 | |
| 49406 chr10 manual_curation CDS 24419824 24419868 . - 1 Parent=GSCOCT00035223001 | |
| 49407 chr10 manual_curation CDS 24419312 24419737 . - 1 Parent=GSCOCT00035223001 | |
| 49408 chr10 manual_curation CDS 24418919 24419238 . - 1 Parent=GSCOCT00035223001 | |
| 49409 chr10 manual_curation CDS 24418560 24418622 . - 0 Parent=GSCOCT00035223001 | |
| 49410 chr10 manual_curation CDS 24418143 24418275 . - 0 Parent=GSCOCT00035223001 | |
| 49411 chr10 manual_curation CDS 24417906 24418048 . - 1 Parent=GSCOCT00035223001 | |
| 49412 chr10 manual_curation CDS 24417572 24417701 . - 0 Parent=GSCOCT00035223001 | |
| 49413 chr10 manual_curation CDS 24417016 24417383 . - 1 Parent=GSCOCT00035223001 | |
| 49414 chr10 manual_curation gene 24441734 24446008 . - . ID=GSCOCG00035222001;Name=Cc10_g13910 | |
| 49415 chr10 manual_curation mRNA 24441734 24446008 . - . ID=GSCOCT00035222001;Parent=GSCOCG00035222001;Name=Cc10_g13910 | |
| 49416 chr10 manual_curation polypeptide 24441734 24446008 . - . ID=GSCOCP00035222001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR011009,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF07714,PROFILE:PS50011,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:P27450,SwissProt:P43293,SwissProt:P46573,TAIR:AT2G17220.1,TAIR:AT4G35600.2,TAIR:AT5G02290.1,TrEMBL:B9HPX8,TrEMBL:B9MYZ9,TrEMBL:B9SMD4;Derives_from=GSCOCT00035222001;Name=Cc10_g13910;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable serine/threonine-protein kinase Cx32%2C chloroplastic,CC_functional_completeness:complete,CC_gene:At4g35600,CC_gene:NAK,CC_gene:APK1B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035222001~ Putative Probable serine/threonine-protein kinase Cx32%2C chloroplastic~ At4g35600~ complete;original_location=join(37346..37506%2C37613..37704%2C38874..38922%2C39117..39550%2C39626..39945%2C40261..40393%2C40499..40641%2C40853..40994%2C41176..41525%2C41588..41620);owner=coffea | |
| 49417 chr10 manual_curation exon 24445848 24446008 . - . Parent=GSCOCT00035222001 | |
| 49418 chr10 manual_curation exon 24445650 24445741 . - . Parent=GSCOCT00035222001 | |
| 49419 chr10 manual_curation exon 24444432 24444480 . - . Parent=GSCOCT00035222001 | |
| 49420 chr10 manual_curation exon 24443804 24444237 . - . Parent=GSCOCT00035222001 | |
| 49421 chr10 manual_curation exon 24443409 24443728 . - . Parent=GSCOCT00035222001 | |
| 49422 chr10 manual_curation exon 24442961 24443093 . - . Parent=GSCOCT00035222001 | |
| 49423 chr10 manual_curation exon 24442713 24442855 . - . Parent=GSCOCT00035222001 | |
| 49424 chr10 manual_curation exon 24442360 24442501 . - . Parent=GSCOCT00035222001 | |
| 49425 chr10 manual_curation exon 24441829 24442178 . - . Parent=GSCOCT00035222001 | |
| 49426 chr10 manual_curation exon 24441734 24441766 . - . Parent=GSCOCT00035222001 | |
| 49427 chr10 manual_curation CDS 24445848 24446008 . - 0 Parent=GSCOCT00035222001 | |
| 49428 chr10 manual_curation CDS 24445650 24445741 . - 2 Parent=GSCOCT00035222001 | |
| 49429 chr10 manual_curation CDS 24444432 24444480 . - 1 Parent=GSCOCT00035222001 | |
| 49430 chr10 manual_curation CDS 24443804 24444237 . - 2 Parent=GSCOCT00035222001 | |
| 49431 chr10 manual_curation CDS 24443409 24443728 . - 1 Parent=GSCOCT00035222001 | |
| 49432 chr10 manual_curation CDS 24442961 24443093 . - 0 Parent=GSCOCT00035222001 | |
| 49433 chr10 manual_curation CDS 24442713 24442855 . - 1 Parent=GSCOCT00035222001 | |
| 49434 chr10 manual_curation CDS 24442360 24442501 . - 0 Parent=GSCOCT00035222001 | |
| 49435 chr10 manual_curation CDS 24441829 24442178 . - 1 Parent=GSCOCT00035222001 | |
| 49436 chr10 manual_curation CDS 24441734 24441766 . - 0 Parent=GSCOCT00035222001 | |
| 49437 chr10 manual_curation gene 24448703 24453620 . - . ID=GSCOCG00035221001;Name=Cc10_g13920 | |
| 49438 chr10 manual_curation mRNA 24448703 24453620 . - . ID=GSCOCT00035221001;Parent=GSCOCG00035221001;Name=Cc10_g13920 | |
| 49439 chr10 manual_curation polypeptide 24448968 24453396 . - . ID=GSCOCP00035221001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR011009,InterPro:IPR020635,PFAM:PF07714,PROFILE:PS50011,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:C0LGK4,SwissProt:P27450,SwissProt:P46573,TAIR:AT2G16250.1,TAIR:AT2G17220.1,TAIR:AT4G39270.1,TrEMBL:B9RBF5,TrEMBL:F6HQM4,TrEMBL:I1K773;Derives_from=GSCOCT00035221001;Name=Cc10_g13920;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At2g16250,CC_functional_completeness:fragment,CC_gene:At2g16250,CC_gene:At4g35600,CC_gene:APK1B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035221001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At2g16250~ At2g16250~ fragment;original_location=join(29958..30586%2C30681..30791%2C31440..31462%2C32033..32458%2C32533..32825%2C33122..33275%2C33381..33523%2C33715..33865%2C34025..34386);owner=coffea | |
| 49440 chr10 manual_curation exon 24452768 24453620 . - . Parent=GSCOCT00035221001 | |
| 49441 chr10 manual_curation exon 24452563 24452673 . - . Parent=GSCOCT00035221001 | |
| 49442 chr10 manual_curation exon 24451892 24451914 . - . Parent=GSCOCT00035221001 | |
| 49443 chr10 manual_curation exon 24450896 24451321 . - . Parent=GSCOCT00035221001 | |
| 49444 chr10 manual_curation exon 24450529 24450821 . - . Parent=GSCOCT00035221001 | |
| 49445 chr10 manual_curation exon 24450079 24450232 . - . Parent=GSCOCT00035221001 | |
| 49446 chr10 manual_curation exon 24449831 24449973 . - . Parent=GSCOCT00035221001 | |
| 49447 chr10 manual_curation exon 24449489 24449639 . - . Parent=GSCOCT00035221001 | |
| 49448 chr10 manual_curation exon 24448703 24449329 . - . Parent=GSCOCT00035221001 | |
| 49449 chr10 manual_curation CDS 24452768 24453396 . - 0 Parent=GSCOCT00035221001 | |
| 49450 chr10 manual_curation CDS 24452563 24452673 . - 2 Parent=GSCOCT00035221001 | |
| 49451 chr10 manual_curation CDS 24451892 24451914 . - 2 Parent=GSCOCT00035221001 | |
| 49452 chr10 manual_curation CDS 24450896 24451321 . - 1 Parent=GSCOCT00035221001 | |
| 49453 chr10 manual_curation CDS 24450529 24450821 . - 1 Parent=GSCOCT00035221001 | |
| 49454 chr10 manual_curation CDS 24450079 24450232 . - 0 Parent=GSCOCT00035221001 | |
| 49455 chr10 manual_curation CDS 24449831 24449973 . - 1 Parent=GSCOCT00035221001 | |
| 49456 chr10 manual_curation CDS 24449489 24449639 . - 0 Parent=GSCOCT00035221001 | |
| 49457 chr10 manual_curation CDS 24448968 24449329 . - 1 Parent=GSCOCT00035221001 | |
| 49458 chr10 manual_curation gene 24458904 24462140 . - . ID=GSCOCG00035219001;Name=Cc10_g13930 | |
| 49459 chr10 manual_curation mRNA 24458904 24462140 . - . ID=GSCOCT00035219001;Parent=GSCOCG00035219001;Name=Cc10_g13930 | |
| 49460 chr10 manual_curation polypeptide 24458904 24462140 . - . ID=GSCOCP00035219001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR011009,InterPro:IPR020635,PFAM:PF07714,PROFILE:PS50011,SMART:SM00219,SUPERFAMILY:SSF56112,SwissProt:C0LGK4,SwissProt:O49840,SwissProt:P46573,TAIR:AT2G16250.1,TAIR:AT2G17220.1,TAIR:AT4G39270.1,TrEMBL:B9RBF5,TrEMBL:B9SMD4,TrEMBL:C6ZRU2;Derives_from=GSCOCT00035219001;Name=Cc10_g13930;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0005524,GO:0006468,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:At2g16250,CC_gene:APK1B,CC_gene:APK2B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035219001~ Hypothetical protein~ At2g16250~ missing_functional_completeness;original_location=join(21214..21377%2C21524..21682%2C21890..21919%2C22425..22798%2C22875..23194%2C23531..23666%2C23722..23735%2C23803..23915%2C23995..24010%2C24106..24181%2C24299..24450);owner=coffea | |
| 49461 chr10 manual_curation exon 24461977 24462140 . - . Parent=GSCOCT00035219001 | |
| 49462 chr10 manual_curation exon 24461672 24461830 . - . Parent=GSCOCT00035219001 | |
| 49463 chr10 manual_curation exon 24461435 24461464 . - . Parent=GSCOCT00035219001 | |
| 49464 chr10 manual_curation exon 24460556 24460929 . - . Parent=GSCOCT00035219001 | |
| 49465 chr10 manual_curation exon 24460160 24460479 . - . Parent=GSCOCT00035219001 | |
| 49466 chr10 manual_curation exon 24459688 24459823 . - . Parent=GSCOCT00035219001 | |
| 49467 chr10 manual_curation exon 24459619 24459632 . - . Parent=GSCOCT00035219001 | |
| 49468 chr10 manual_curation exon 24459439 24459551 . - . Parent=GSCOCT00035219001 | |
| 49469 chr10 manual_curation exon 24459344 24459359 . - . Parent=GSCOCT00035219001 | |
| 49470 chr10 manual_curation exon 24459173 24459248 . - . Parent=GSCOCT00035219001 | |
| 49471 chr10 manual_curation exon 24458904 24459055 . - . Parent=GSCOCT00035219001 | |
| 49472 chr10 manual_curation CDS 24461977 24462140 . - 0 Parent=GSCOCT00035219001 | |
| 49473 chr10 manual_curation CDS 24461672 24461830 . - 2 Parent=GSCOCT00035219001 | |
| 49474 chr10 manual_curation CDS 24461435 24461464 . - 2 Parent=GSCOCT00035219001 | |
| 49475 chr10 manual_curation CDS 24460556 24460929 . - 2 Parent=GSCOCT00035219001 | |
| 49476 chr10 manual_curation CDS 24460160 24460479 . - 1 Parent=GSCOCT00035219001 | |
| 49477 chr10 manual_curation CDS 24459688 24459823 . - 0 Parent=GSCOCT00035219001 | |
| 49478 chr10 manual_curation CDS 24459619 24459632 . - 1 Parent=GSCOCT00035219001 | |
| 49479 chr10 manual_curation CDS 24459439 24459551 . - 0 Parent=GSCOCT00035219001 | |
| 49480 chr10 manual_curation CDS 24459344 24459359 . - 2 Parent=GSCOCT00035219001 | |
| 49481 chr10 manual_curation CDS 24459173 24459248 . - 0 Parent=GSCOCT00035219001 | |
| 49482 chr10 manual_curation CDS 24458904 24459055 . - 1 Parent=GSCOCT00035219001 | |
| 49483 chr10 manual_curation gene 24463229 24465942 . - . ID=GSCOCG00035218001;Name=Cc10_g13940 | |
| 49484 chr10 manual_curation mRNA 24463229 24465942 . - . ID=GSCOCT00035218001;Parent=GSCOCG00035218001;Name=Cc10_g13940 | |
| 49485 chr10 manual_curation polypeptide 24463697 24465727 . - . ID=GSCOCP00035218001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR011009,InterPro:IPR017442,InterPro:IPR018392,InterPro:IPR020635,PFAM:PF00069,PFAM:PF01476,PROFILE:PS50011,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:P93749,SwissProt:Q0WNY5,SwissProt:Q9SX31,TAIR:AT2G23770.1,TAIR:AT2G33580.1,TAIR:AT3G21630.1,TrEMBL:B9H5Z0,TrEMBL:D3KU01,TrEMBL:F6I6Y0;Derives_from=GSCOCT00035218001;Name=Cc10_g13940;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,GO:0016998,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable protein kinase At2g41970,CC_functional_completeness:modules,CC_gene:PERK9,CC_gene:At2g41970,CC_gene:WAKL18;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035218001~ Putative Probable protein kinase At2g41970~ PERK9~ modules;original_location=join(17627..18950%2C18981..19657);owner=coffea | |
| 49486 chr10 manual_curation exon 24464404 24465942 . - . Parent=GSCOCT00035218001 | |
| 49487 chr10 manual_curation exon 24463229 24464373 . - . Parent=GSCOCT00035218001 | |
| 49488 chr10 manual_curation CDS 24464404 24465727 . - 0 Parent=GSCOCT00035218001 | |
| 49489 chr10 manual_curation CDS 24463697 24464373 . - 1 Parent=GSCOCT00035218001 | |
| 49490 chr10 manual_curation gene 24469871 24472936 . + . ID=GSCOCG00035217001;Name=Cc10_g13950 | |
| 49491 chr10 manual_curation mRNA 24469871 24472936 . + . ID=GSCOCT00035217001;Parent=GSCOCG00035217001;Name=Cc10_g13950 | |
| 49492 chr10 manual_curation polypeptide 24469871 24472936 . + . ID=GSCOCP00035217001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:C0LGP4,SwissProt:C0LGT6,SwissProt:Q9SD62,TAIR:AT3G47090.1,TAIR:AT3G47570.1,TAIR:AT5G20480.1,TrEMBL:A5C1G0,TrEMBL:B9I0G8,TrEMBL:F6HKT0;Derives_from=GSCOCT00035217001;Name=Cc10_g13950;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570,CC_functional_completeness:complete,CC_gene:At3g47570,CC_gene:EFR,CC_gene:At3g47110;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035217001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570~ At3g47570~ complete;original_location=complement(join(10963..13483%2C10418..10812));owner=coffea | |
| 49493 chr10 manual_curation exon 24472542 24472936 . + . Parent=GSCOCT00035217001 | |
| 49494 chr10 manual_curation exon 24469871 24472391 . + . Parent=GSCOCT00035217001 | |
| 49495 chr10 manual_curation CDS 24472542 24472936 . + 1 Parent=GSCOCT00035217001 | |
| 49496 chr10 manual_curation CDS 24469871 24472391 . + 0 Parent=GSCOCT00035217001 | |
| 49497 chr10 manual_curation gene 24478583 24481780 . + . ID=GSCOCG00035216001;Name=Cc10_g13960 | |
| 49498 chr10 manual_curation mRNA 24478583 24481780 . + . ID=GSCOCT00035216001;Parent=GSCOCG00035216001;Name=Cc10_g13960 | |
| 49499 chr10 manual_curation polypeptide 24478583 24481780 . + . ID=GSCOCP00035216001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:C0LGP4,SwissProt:C0LGT6,SwissProt:Q9SD62,TAIR:AT3G47090.1,TAIR:AT3G47570.1,TAIR:AT3G47580.1,TrEMBL:B9HLG3,TrEMBL:B9I0G8,TrEMBL:B9IL48;Derives_from=GSCOCT00035216001;Name=Cc10_g13960;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570,CC_functional_completeness:complete,CC_gene:At3g47570,CC_gene:EFR,CC_gene:At3g47110;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00035216001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570~ At3g47570~ complete;original_location=complement(join(3878..4771%2C2119..3790%2C1793..1968%2C1574..1705));owner=coffea | |
| 49500 chr10 manual_curation exon 24481649 24481780 . + . Parent=GSCOCT00035216001 | |
| 49501 chr10 manual_curation exon 24481386 24481561 . + . Parent=GSCOCT00035216001 | |
| 49502 chr10 manual_curation exon 24479564 24481235 . + . Parent=GSCOCT00035216001 | |
| 49503 chr10 manual_curation exon 24478583 24479476 . + . Parent=GSCOCT00035216001 | |
| 49504 chr10 manual_curation CDS 24481649 24481780 . + 0 Parent=GSCOCT00035216001 | |
| 49505 chr10 manual_curation CDS 24481386 24481561 . + 1 Parent=GSCOCT00035216001 | |
| 49506 chr10 manual_curation CDS 24479564 24481235 . + 0 Parent=GSCOCT00035216001 | |
| 49507 chr10 manual_curation CDS 24478583 24479476 . + 0 Parent=GSCOCT00035216001 | |
| 49508 chr10 manual_curation gene 24485503 24488840 . + . ID=GSCOCG00002158001;Name=Cc10_g13970 | |
| 49509 chr10 manual_curation mRNA 24485503 24488840 . + . ID=GSCOCT00002158001;Parent=GSCOCG00002158001;Name=Cc10_g13970 | |
| 49510 chr10 manual_curation polypeptide 24485553 24487410 . + . ID=GSCOCP00002158001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR012677,PFAM:PF00076,PROFILE:PS50102,SMART:SM00360,SwissProt:Q09442,SwissProt:Q15427,SwissProt:Q6AYL5,TAIR:AT2G18510.1,TAIR:AT4G10110.1,TrEMBL:D7SN08,TrEMBL:I1LD53,TrEMBL:Q2I310;Derives_from=GSCOCT00002158001;Name=Cc10_g13970;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,CC_EC_number:missing_EC_number,PRODUCT:RNA-binding (RRM/RBD/RNP motifs) family protein,CC_functional_completeness:complete,CC_gene:sap-49,CC_gene:SF3B4,CC_gene:Sf3b4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00002158001~ RNA-binding (RRM/RBD/RNP motifs) family protein~ sap-49~ complete;original_location=join(2100..2136%2C2773..2984%2C3471..3633%2C3737..3957);owner=coffea | |
| 49511 chr10 manual_curation exon 24485503 24485589 . + . Parent=GSCOCT00002158001 | |
| 49512 chr10 manual_curation exon 24486226 24486437 . + . Parent=GSCOCT00002158001 | |
| 49513 chr10 manual_curation exon 24486924 24487086 . + . Parent=GSCOCT00002158001 | |
| 49514 chr10 manual_curation exon 24487190 24488840 . + . Parent=GSCOCT00002158001 | |
| 49515 chr10 manual_curation CDS 24485553 24485589 . + 0 Parent=GSCOCT00002158001 | |
| 49516 chr10 manual_curation CDS 24486226 24486437 . + 1 Parent=GSCOCT00002158001 | |
| 49517 chr10 manual_curation CDS 24486924 24487086 . + 0 Parent=GSCOCT00002158001 | |
| 49518 chr10 manual_curation CDS 24487190 24487410 . + 1 Parent=GSCOCT00002158001 | |
| 49519 chr10 manual_curation gene 24490223 24492220 . + . ID=GSCOCG00002159001;Name=Cc10_g13980 | |
| 49520 chr10 manual_curation mRNA 24490223 24492220 . + . ID=GSCOCT00002159001;Parent=GSCOCG00002159001;Name=Cc10_g13980 | |
| 49521 chr10 manual_curation polypeptide 24490223 24492220 . + . ID=GSCOCP00002159001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:O64766,SwissProt:Q56XI1,SwissProt:Q9SY02,TAIR:AT1G09410.1,TAIR:AT2G35030.1,TAIR:AT4G02750.1,TIGRFAMs:TIGR00756,TrEMBL:B9IHD3,TrEMBL:F6HS87,TrEMBL:I1LI57;Derives_from=GSCOCT00002159001;Name=Cc10_g13980;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Pentatricopeptide repeat-containing protein At4g02750,CC_functional_completeness:complete,CC_gene:PCMP-H24,CC_gene:PCMP-H18,CC_gene:PCMP-E15;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00002159001~ Putative Pentatricopeptide repeat-containing protein At4g02750~ PCMP-H24~ complete;original_location=join(6770..7498%2C7874..8767);owner=coffea | |
| 49522 chr10 manual_curation exon 24490223 24490951 . + . Parent=GSCOCT00002159001 | |
| 49523 chr10 manual_curation exon 24491327 24492220 . + . Parent=GSCOCT00002159001 | |
| 49524 chr10 manual_curation CDS 24490223 24490951 . + 0 Parent=GSCOCT00002159001 | |
| 49525 chr10 manual_curation CDS 24491327 24492220 . + 0 Parent=GSCOCT00002159001 | |
| 49526 chr10 manual_curation gene 24495191 24496192 . - . ID=GSCOCG00002160001;Name=Cc10_g13990 | |
| 49527 chr10 manual_curation mRNA 24495191 24496192 . - . ID=GSCOCT00002160001;Parent=GSCOCG00002160001;Name=Cc10_g13990 | |
| 49528 chr10 manual_curation polypeptide 24495191 24496192 . - . ID=GSCOCP00002160001;Dbxref=InterPro:IPR013094,PFAM:PF07859,SwissProt:Q940G6,SwissProt:Q9LT10,SwissProt:Q9MAA7,TAIR:AT3G05120.1,TAIR:AT5G23530.1,TAIR:AT5G27320.1,TrEMBL:A5ATP1,TrEMBL:F6GW13,TrEMBL:F6GW15;Derives_from=GSCOCT00002160001;Name=Cc10_g13990;Ontology_term=CC_evidence_code:ISS,GO:0008152,GO:0016787,CC_EC_number:3.1.1.79,PRODUCT:Putative Probable carboxylesterase 18,CC_functional_completeness:complete,CC_gene:CXE18,CC_gene:GID1C,CC_gene:GID1A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00002160001~ Putative Probable carboxylesterase 18~ CXE18~ complete;original_location=complement(join(12171..12739%2C11738..12038));owner=coffea | |
| 49529 chr10 manual_curation exon 24495191 24495491 . - . Parent=GSCOCT00002160001 | |
| 49530 chr10 manual_curation exon 24495624 24496192 . - . Parent=GSCOCT00002160001 | |
| 49531 chr10 manual_curation CDS 24495191 24495491 . - 2 Parent=GSCOCT00002160001 | |
| 49532 chr10 manual_curation CDS 24495624 24496192 . - 0 Parent=GSCOCT00002160001 | |
| 49533 chr10 manual_curation gene 24498432 24503216 . + . ID=GSCOCG00002161001;Name=Cc10_g14000 | |
| 49534 chr10 manual_curation mRNA 24498432 24503216 . + . ID=GSCOCT00002161001;Parent=GSCOCG00002161001;Name=Cc10_g14000 | |
| 49535 chr10 manual_curation polypeptide 24498576 24502700 . + . ID=GSCOCP00002161001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019775,InterPro:IPR019781,InterPro:IPR019782,InterPro:IPR020472,PFAM:PF00400,PRINTS:PR00320,PROFILE:PS50082,PROFILE:PS50294,PROSITE:PS00678,SMART:SM00320,SUPERFAMILY:SSF50978,SwissProt:Q38884,SwissProt:Q5EBE8,SwissProt:Q7ZV55,TAIR:AT1G15470.1,TAIR:AT2G46280.1,TAIR:AT2G46290.1,TrEMBL:B9S7C0,TrEMBL:I1J582,TrEMBL:Q94KS2;Derives_from=GSCOCT00002161001;Name=Cc10_g14000;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Eukaryotic translation initiation factor 3 subunit I,CC_functional_completeness:complete,CC_gene:TIF3I1,CC_gene:eif3i;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00002161001~ Eukaryotic translation initiation factor 3 subunit I~ TIF3I1~ complete;original_location=join(15123..15227%2C15269..15347%2C15971..16186%2C16917..17044%2C17263..17382%2C17524..17613%2C18596..18682%2C18795..18874%2C19172..19247);owner=coffea | |
| 49536 chr10 manual_curation exon 24498432 24498680 . + . Parent=GSCOCT00002161001 | |
| 49537 chr10 manual_curation exon 24498722 24498800 . + . Parent=GSCOCT00002161001 | |
| 49538 chr10 manual_curation exon 24499424 24499639 . + . Parent=GSCOCT00002161001 | |
| 49539 chr10 manual_curation exon 24500370 24500497 . + . Parent=GSCOCT00002161001 | |
| 49540 chr10 manual_curation exon 24500716 24500835 . + . Parent=GSCOCT00002161001 | |
| 49541 chr10 manual_curation exon 24500977 24501066 . + . Parent=GSCOCT00002161001 | |
| 49542 chr10 manual_curation exon 24502049 24502135 . + . Parent=GSCOCT00002161001 | |
| 49543 chr10 manual_curation exon 24502248 24502327 . + . Parent=GSCOCT00002161001 | |
| 49544 chr10 manual_curation exon 24502625 24503216 . + . Parent=GSCOCT00002161001 | |
| 49545 chr10 manual_curation CDS 24498576 24498680 . + 0 Parent=GSCOCT00002161001 | |
| 49546 chr10 manual_curation CDS 24498722 24498800 . + 0 Parent=GSCOCT00002161001 | |
| 49547 chr10 manual_curation CDS 24499424 24499639 . + 1 Parent=GSCOCT00002161001 | |
| 49548 chr10 manual_curation CDS 24500370 24500497 . + 1 Parent=GSCOCT00002161001 | |
| 49549 chr10 manual_curation CDS 24500716 24500835 . + 0 Parent=GSCOCT00002161001 | |
| 49550 chr10 manual_curation CDS 24500977 24501066 . + 0 Parent=GSCOCT00002161001 | |
| 49551 chr10 manual_curation CDS 24502049 24502135 . + 0 Parent=GSCOCT00002161001 | |
| 49552 chr10 manual_curation CDS 24502248 24502327 . + 0 Parent=GSCOCT00002161001 | |
| 49553 chr10 manual_curation CDS 24502625 24502700 . + 2 Parent=GSCOCT00002161001 | |
| 49554 chr10 manual_curation gene 24507341 24512023 . + . ID=GSCOCG00002162001;Name=Cc10_g14010 | |
| 49555 chr10 manual_curation mRNA 24507341 24512023 . + . ID=GSCOCT00002162001;Parent=GSCOCG00002162001;Name=Cc10_g14010 | |
| 49556 chr10 manual_curation polypeptide 24507385 24512023 . + . ID=GSCOCP00002162001;Dbxref=GENE3D:G3DSA:1.25.40.10,InterPro:IPR001440,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR019734,PFAM:PF00515,PROFILE:PS50005,PROFILE:PS50293,SMART:SM00028,SwissProt:Q5M990,SwissProt:Q6DI40,SwissProt:Q9D6K7,TAIR:AT1G77230.1,TrEMBL:B9GTY6,TrEMBL:B9S2R9,TrEMBL:F6H0H0;Derives_from=GSCOCT00002162001;Name=Cc10_g14010;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:Tetratricopeptide repeat (TPR)-like superfamily protein,CC_functional_completeness:complete,CC_gene:ttc33,CC_gene:Ttc33;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00002162001~ Tetratricopeptide repeat (TPR)-like superfamily protein~ ttc33~ complete;original_location=join(23932..24165%2C26408..26546%2C26629..26660%2C27073..27159%2C28442..28570);owner=coffea | |
| 49557 chr10 manual_curation exon 24507341 24507618 . + . Parent=GSCOCT00002162001 | |
| 49558 chr10 manual_curation exon 24509861 24509999 . + . Parent=GSCOCT00002162001 | |
| 49559 chr10 manual_curation exon 24510082 24510113 . + . Parent=GSCOCT00002162001 | |
| 49560 chr10 manual_curation exon 24510526 24510612 . + . Parent=GSCOCT00002162001 | |
| 49561 chr10 manual_curation exon 24511895 24512023 . + . Parent=GSCOCT00002162001 | |
| 49562 chr10 manual_curation CDS 24507385 24507618 . + 0 Parent=GSCOCT00002162001 | |
| 49563 chr10 manual_curation CDS 24509861 24509999 . + 0 Parent=GSCOCT00002162001 | |
| 49564 chr10 manual_curation CDS 24510082 24510113 . + 1 Parent=GSCOCT00002162001 | |
| 49565 chr10 manual_curation CDS 24510526 24510612 . + 0 Parent=GSCOCT00002162001 | |
| 49566 chr10 manual_curation CDS 24511895 24512023 . + 0 Parent=GSCOCT00002162001 | |
| 49567 chr10 manual_curation gene 24512083 24520076 . - . ID=GSCOCG00002163001;Name=Cc10_g14020 | |
| 49568 chr10 manual_curation mRNA 24512083 24520076 . - . ID=GSCOCT00002163001;Parent=GSCOCG00002163001;Name=Cc10_g14020 | |
| 49569 chr10 manual_curation polypeptide 24512956 24520076 . - . ID=GSCOCP00002163001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR012677,PFAM:PF00076,PROFILE:PS50102,SMART:SM00360,SwissProt:Q3MHP0,SwissProt:Q5R6C7,SwissProt:Q96LT9,TAIR:AT1G09230.1,TrEMBL:B9SHJ5,TrEMBL:D7SNK2,TrEMBL:F6HYT0;Derives_from=GSCOCT00002163001;Name=Cc10_g14020;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,CC_EC_number:missing_EC_number,PRODUCT:RNA-binding (RRM/RBD/RNP motifs) family protein,CC_functional_completeness:complete,CC_gene:RNPC3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00002163001~ RNA-binding (RRM/RBD/RNP motifs) family protein~ RNPC3~ complete;original_location=complement(join(36406..36623%2C35510..35581%2C35167..35394%2C34528..34609%2C34243..34422%2C32594..32758%2C32337..32507%2C31843..31930%2C31599..31657%2C30301..30366%2C29503..29580));owner=coffea | |
| 49570 chr10 manual_curation exon 24512083 24513033 . - . Parent=GSCOCT00002163001 | |
| 49571 chr10 manual_curation exon 24513754 24513819 . - . Parent=GSCOCT00002163001 | |
| 49572 chr10 manual_curation exon 24515052 24515110 . - . Parent=GSCOCT00002163001 | |
| 49573 chr10 manual_curation exon 24515296 24515383 . - . Parent=GSCOCT00002163001 | |
| 49574 chr10 manual_curation exon 24515790 24515960 . - . Parent=GSCOCT00002163001 | |
| 49575 chr10 manual_curation exon 24516047 24516211 . - . Parent=GSCOCT00002163001 | |
| 49576 chr10 manual_curation exon 24517696 24517875 . - . Parent=GSCOCT00002163001 | |
| 49577 chr10 manual_curation exon 24517981 24518062 . - . Parent=GSCOCT00002163001 | |
| 49578 chr10 manual_curation exon 24518620 24518847 . - . Parent=GSCOCT00002163001 | |
| 49579 chr10 manual_curation exon 24518963 24519034 . - . Parent=GSCOCT00002163001 | |
| 49580 chr10 manual_curation exon 24519859 24520076 . - . Parent=GSCOCT00002163001 | |
| 49581 chr10 manual_curation CDS 24512956 24513033 . - 0 Parent=GSCOCT00002163001 | |
| 49582 chr10 manual_curation CDS 24513754 24513819 . - 0 Parent=GSCOCT00002163001 | |
| 49583 chr10 manual_curation CDS 24515052 24515110 . - 1 Parent=GSCOCT00002163001 | |
| 49584 chr10 manual_curation CDS 24515296 24515383 . - 0 Parent=GSCOCT00002163001 | |
| 49585 chr10 manual_curation CDS 24515790 24515960 . - 0 Parent=GSCOCT00002163001 | |
| 49586 chr10 manual_curation CDS 24516047 24516211 . - 0 Parent=GSCOCT00002163001 | |
| 49587 chr10 manual_curation CDS 24517696 24517875 . - 0 Parent=GSCOCT00002163001 | |
| 49588 chr10 manual_curation CDS 24517981 24518062 . - 2 Parent=GSCOCT00002163001 | |
| 49589 chr10 manual_curation CDS 24518620 24518847 . - 2 Parent=GSCOCT00002163001 | |
| 49590 chr10 manual_curation CDS 24518963 24519034 . - 2 Parent=GSCOCT00002163001 | |
| 49591 chr10 manual_curation CDS 24519859 24520076 . - 0 Parent=GSCOCT00002163001 | |
| 49592 chr10 manual_curation gene 24521776 24522684 . + . ID=GSCOCG00002164001;Name=Cc10_g14030 | |
| 49593 chr10 manual_curation mRNA 24521776 24522684 . + . ID=GSCOCT00002164001;Parent=GSCOCG00002164001;Name=Cc10_g14030 | |
| 49594 chr10 manual_curation polypeptide 24521776 24522684 . + . ID=GSCOCP00002164001;Dbxref=TAIR:AT1G31130.1,TAIR:AT4G19950.1,TAIR:AT5G44860.1,TrEMBL:B9H7M4,TrEMBL:C6TI65,TrEMBL:I1KAH9;Derives_from=GSCOCT00002164001;Name=Cc10_g14030;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00002164001~ Putative unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19950.1)%3B Has 246 Blast hits to 244 proteins in 29 species: Archae - 2%3B Bacteria - 16%3B Metazoa - 0%3B Fungi - 0%3B Plants - 222%3B Viruses - 0%3B Other Eukaryotes - 6 (source: NCBI BLink).~ unknown_gene~ complete;original_location=38323..39231;owner=coffea | |
| 49595 chr10 manual_curation exon 24521776 24522684 . + . Parent=GSCOCT00002164001 | |
| 49596 chr10 manual_curation CDS 24521776 24522684 . + 0 Parent=GSCOCT00002164001 | |
| 49597 chr10 manual_curation gene 24597281 24598831 . - . ID=GSCOCG00011990001;Name=Cc10_g14040 | |
| 49598 chr10 manual_curation mRNA 24597281 24598831 . - . ID=GSCOCT00011990001;Parent=GSCOCG00011990001;Name=Cc10_g14040 | |
| 49599 chr10 manual_curation polypeptide 24597851 24598831 . - . ID=GSCOCP00011990001;Dbxref=TrEMBL:D8QY50,TrEMBL:D8RUV9,TrEMBL:D8SHC9;Derives_from=GSCOCT00011990001;Name=Cc10_g14040;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011990001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=complement(37824..38804);owner=coffea | |
| 49600 chr10 manual_curation exon 24597281 24598831 . - . Parent=GSCOCT00011990001 | |
| 49601 chr10 manual_curation CDS 24597851 24598831 . - 0 Parent=GSCOCT00011990001 | |
| 49602 chr10 manual_curation gene 24609353 24611881 . - . ID=GSCOCG00011991001;Name=Cc10_g14050 | |
| 49603 chr10 manual_curation mRNA 24609353 24611881 . - . ID=GSCOCT00011991001;Parent=GSCOCG00011991001;Name=Cc10_g14050 | |
| 49604 chr10 manual_curation polypeptide 24609353 24611881 . - . ID=GSCOCP00011991001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR002198,InterPro:IPR002347,InterPro:IPR016040,PANTHER:PTHR19410,PFAM:PF00106,PRINTS:PR00080,PRINTS:PR00081,SwissProt:B2X050,SwissProt:Q9M2E2,SwissProt:Q9ZUH5,TAIR:AT1G01800.1,TAIR:AT2G24190.2,TAIR:AT3G61220.2,TrEMBL:D7UC31,TrEMBL:D7UC32,TrEMBL:D7UC33;Derives_from=GSCOCT00011991001;Name=Cc10_g14050;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,GO:0016491,GO:0055114,CC_EC_number:1.1.1.197,PRODUCT:( )-neomenthol dehydrogenase,CC_functional_completeness:complete,CC_gene:SDR1,CC_gene:MNR1,CC_gene:SDR2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011991001~ ( )-neomenthol dehydrogenase~ SDR1~ complete;original_location=complement(join(51743..51854%2C51102..51412%2C50786..50868%2C50691..50719%2C49803..49975%2C49326..49586));owner=coffea | |
| 49605 chr10 manual_curation exon 24609353 24609613 . - . Parent=GSCOCT00011991001 | |
| 49606 chr10 manual_curation exon 24609830 24610002 . - . Parent=GSCOCT00011991001 | |
| 49607 chr10 manual_curation exon 24610718 24610746 . - . Parent=GSCOCT00011991001 | |
| 49608 chr10 manual_curation exon 24610813 24610895 . - . Parent=GSCOCT00011991001 | |
| 49609 chr10 manual_curation exon 24611129 24611439 . - . Parent=GSCOCT00011991001 | |
| 49610 chr10 manual_curation exon 24611770 24611881 . - . Parent=GSCOCT00011991001 | |
| 49611 chr10 manual_curation CDS 24609353 24609613 . - 0 Parent=GSCOCT00011991001 | |
| 49612 chr10 manual_curation CDS 24609830 24610002 . - 1 Parent=GSCOCT00011991001 | |
| 49613 chr10 manual_curation CDS 24610718 24610746 . - 2 Parent=GSCOCT00011991001 | |
| 49614 chr10 manual_curation CDS 24610813 24610895 . - 0 Parent=GSCOCT00011991001 | |
| 49615 chr10 manual_curation CDS 24611129 24611439 . - 1 Parent=GSCOCT00011991001 | |
| 49616 chr10 manual_curation CDS 24611770 24611881 . - 0 Parent=GSCOCT00011991001 | |
| 49617 chr10 manual_curation gene 24622316 24625946 . - . ID=GSCOCG00011992001;Name=Cc10_g14060 | |
| 49618 chr10 manual_curation mRNA 24622316 24625946 . - . ID=GSCOCT00011992001;Parent=GSCOCG00011992001;Name=Cc10_g14060 | |
| 49619 chr10 manual_curation polypeptide 24622898 24625684 . - . ID=GSCOCP00011992001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR012677,PFAM:PF00076,PROFILE:PS50102,SMART:SM00360,TAIR:AT1G21320.1,TAIR:AT1G76940.1,TrEMBL:C6TB71,TrEMBL:I1NH09,TrEMBL:I1NH10;Derives_from=GSCOCT00011992001;Name=Cc10_g14060;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,CC_EC_number:missing_EC_number,PRODUCT:nucleotide binding%3Bnucleic acid binding,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011992001~ nucleotide binding%3Bnucleic acid binding~ unknown_gene~ fragment;original_location=complement(join(65570..65657%2C63999..64135%2C63628..63913%2C63445..63506%2C63252..63333%2C62871..62974));owner=coffea | |
| 49620 chr10 manual_curation exon 24625796 24625946 . - . Parent=GSCOCT00011992001 | |
| 49621 chr10 manual_curation exon 24622316 24623001 . - . Parent=GSCOCT00011992001 | |
| 49622 chr10 manual_curation exon 24623279 24623360 . - . Parent=GSCOCT00011992001 | |
| 49623 chr10 manual_curation exon 24623472 24623533 . - . Parent=GSCOCT00011992001 | |
| 49624 chr10 manual_curation exon 24623655 24623940 . - . Parent=GSCOCT00011992001 | |
| 49625 chr10 manual_curation exon 24624026 24624162 . - . Parent=GSCOCT00011992001 | |
| 49626 chr10 manual_curation exon 24625597 24625691 . - . Parent=GSCOCT00011992001 | |
| 49627 chr10 manual_curation CDS 24622898 24623001 . - 1 Parent=GSCOCT00011992001 | |
| 49628 chr10 manual_curation CDS 24623279 24623360 . - 0 Parent=GSCOCT00011992001 | |
| 49629 chr10 manual_curation CDS 24623472 24623533 . - 1 Parent=GSCOCT00011992001 | |
| 49630 chr10 manual_curation CDS 24623655 24623940 . - 0 Parent=GSCOCT00011992001 | |
| 49631 chr10 manual_curation CDS 24624026 24624162 . - 1 Parent=GSCOCT00011992001 | |
| 49632 chr10 manual_curation CDS 24625597 24625684 . - 0 Parent=GSCOCT00011992001 | |
| 49633 chr10 manual_curation gene 24628385 24630037 . + . ID=GSCOCG00011993001;Name=Cc10_g14070 | |
| 49634 chr10 manual_curation mRNA 24628385 24630037 . + . ID=GSCOCT00011993001;Parent=GSCOCG00011993001;Name=Cc10_g14070 | |
| 49635 chr10 manual_curation polypeptide 24628385 24630037 . + . ID=GSCOCP00011993001;Dbxref=InterPro:IPR006634,PFAM:PF03798,PROFILE:PS50922,SMART:SM00724,SwissProt:Q0VD42,SwissProt:Q3TYE7,SwissProt:Q6ZRR5,TAIR:AT1G35170.1,TAIR:AT1G35180.1,TAIR:AT1G45010.1,TrEMBL:E0CQI4,TrEMBL:I1M885,TrEMBL:I1MXY9;Derives_from=GSCOCT00011993001;Name=Cc10_g14070;Ontology_term=CC_evidence_code:ISS,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Putative Transmembrane protein 136,CC_functional_completeness:complete,CC_gene:TMEM136,CC_gene:Tmem136;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011993001~ Putative Transmembrane protein 136~ TMEM136~ complete;original_location=join(68358..68576%2C68731..68871%2C68981..69100%2C69535..69630%2C69831..70010);owner=coffea | |
| 49636 chr10 manual_curation exon 24628385 24628603 . + . Parent=GSCOCT00011993001 | |
| 49637 chr10 manual_curation exon 24628758 24628898 . + . Parent=GSCOCT00011993001 | |
| 49638 chr10 manual_curation exon 24629008 24629127 . + . Parent=GSCOCT00011993001 | |
| 49639 chr10 manual_curation exon 24629562 24629657 . + . Parent=GSCOCT00011993001 | |
| 49640 chr10 manual_curation exon 24629858 24630037 . + . Parent=GSCOCT00011993001 | |
| 49641 chr10 manual_curation CDS 24628385 24628603 . + 0 Parent=GSCOCT00011993001 | |
| 49642 chr10 manual_curation CDS 24628758 24628898 . + 0 Parent=GSCOCT00011993001 | |
| 49643 chr10 manual_curation CDS 24629008 24629127 . + 0 Parent=GSCOCT00011993001 | |
| 49644 chr10 manual_curation CDS 24629562 24629657 . + 0 Parent=GSCOCT00011993001 | |
| 49645 chr10 manual_curation CDS 24629858 24630037 . + 0 Parent=GSCOCT00011993001 | |
| 49646 chr10 manual_curation gene 24633435 24634556 . - . ID=GSCOCG00011994001;Name=Cc10_g14080 | |
| 49647 chr10 manual_curation mRNA 24633435 24634556 . - . ID=GSCOCT00011994001;Parent=GSCOCG00011994001;Name=Cc10_g14080 | |
| 49648 chr10 manual_curation polypeptide 24633435 24634556 . - . ID=GSCOCP00011994001;Dbxref=SwissProt:Q9M2V7,SwissProt:Q9MAH4,SwissProt:Q9SIT6,TAIR:AT1G53270.1,TAIR:AT2G13610.1,TAIR:AT3G55090.1,TrEMBL:B9I1V7,TrEMBL:B9MW36,TrEMBL:B9N644;Derives_from=GSCOCT00011994001;Name=Cc10_g14080;Ontology_term=CC_evidence_code:ISS,CC_EC_number:3.6.3.36,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:ABCG10,CC_gene:ABCG5,CC_gene:ABCG16;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011994001~ Hypothetical protein~ ABCG10~ missing_functional_completeness;original_location=complement(join(74007..74529%2C73408..73550));owner=coffea | |
| 49649 chr10 manual_curation exon 24633435 24633577 . - . Parent=GSCOCT00011994001 | |
| 49650 chr10 manual_curation exon 24634034 24634556 . - . Parent=GSCOCT00011994001 | |
| 49651 chr10 manual_curation CDS 24633435 24633577 . - 1 Parent=GSCOCT00011994001 | |
| 49652 chr10 manual_curation CDS 24634034 24634556 . - 0 Parent=GSCOCT00011994001 | |
| 49653 chr10 manual_curation gene 24654803 24662665 . + . ID=GSCOCG00011995001;Name=Cc10_g14090 | |
| 49654 chr10 manual_curation mRNA 24654803 24662665 . + . ID=GSCOCT00011995001;Parent=GSCOCG00011995001;Name=Cc10_g14090 | |
| 49655 chr10 manual_curation polypeptide 24655338 24662179 . + . ID=GSCOCP00011995001;Dbxref=GENE3D:G3DSA:2.130.10.30,GENE3D:G3DSA:2.30.29.30,InterPro:IPR000306,InterPro:IPR000408,InterPro:IPR009091,InterPro:IPR011011,InterPro:IPR011993,InterPro:IPR013591,InterPro:IPR017455,PFAM:PF00415,PFAM:PF01363,PFAM:PF08381,PRINTS:PR00633,PROFILE:PS50012,PROFILE:PS50178,PROSITE:PS00626,SMART:SM00064,SUPERFAMILY:SSF50985,SUPERFAMILY:SSF57903,SwissProt:O95714,SwissProt:Q15751,SwissProt:Q4U2R1,TAIR:AT1G76950.1,TAIR:AT4G14368.1,TAIR:AT5G42140.1,TrEMBL:B9GTL0,TrEMBL:B9SJF7,TrEMBL:F6HW90;Derives_from=GSCOCT00011995001;Name=Cc10_g14090;Ontology_term=CC_evidence_code:ISS,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable E3 ubiquitin-protein ligase HERC1,CC_functional_completeness:fragment,CC_gene:HERC1,CC_gene:HERC2,CC_gene:Herc2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011995001~ Putative Probable E3 ubiquitin-protein ligase HERC1~ HERC1~ fragment;original_location=join(95311..95358%2C96568..96654%2C97020..97109%2C97266..97352%2C97445..97564%2C98543..100642%2C100769..100915%2C101046..101587%2C101993..102152);owner=coffea | |
| 49656 chr10 manual_curation exon 24654803 24655385 . + . Parent=GSCOCT00011995001 | |
| 49657 chr10 manual_curation exon 24656595 24656681 . + . Parent=GSCOCT00011995001 | |
| 49658 chr10 manual_curation exon 24657047 24657136 . + . Parent=GSCOCT00011995001 | |
| 49659 chr10 manual_curation exon 24657293 24657379 . + . Parent=GSCOCT00011995001 | |
| 49660 chr10 manual_curation exon 24657472 24657591 . + . Parent=GSCOCT00011995001 | |
| 49661 chr10 manual_curation exon 24658570 24660669 . + . Parent=GSCOCT00011995001 | |
| 49662 chr10 manual_curation exon 24660796 24660942 . + . Parent=GSCOCT00011995001 | |
| 49663 chr10 manual_curation exon 24661073 24661614 . + . Parent=GSCOCT00011995001 | |
| 49664 chr10 manual_curation exon 24662020 24662665 . + . Parent=GSCOCT00011995001 | |
| 49665 chr10 manual_curation CDS 24655338 24655385 . + 0 Parent=GSCOCT00011995001 | |
| 49666 chr10 manual_curation CDS 24656595 24656681 . + 0 Parent=GSCOCT00011995001 | |
| 49667 chr10 manual_curation CDS 24657047 24657136 . + 0 Parent=GSCOCT00011995001 | |
| 49668 chr10 manual_curation CDS 24657293 24657379 . + 0 Parent=GSCOCT00011995001 | |
| 49669 chr10 manual_curation CDS 24657472 24657591 . + 0 Parent=GSCOCT00011995001 | |
| 49670 chr10 manual_curation CDS 24658570 24660669 . + 0 Parent=GSCOCT00011995001 | |
| 49671 chr10 manual_curation CDS 24660796 24660942 . + 0 Parent=GSCOCT00011995001 | |
| 49672 chr10 manual_curation CDS 24661073 24661614 . + 0 Parent=GSCOCT00011995001 | |
| 49673 chr10 manual_curation CDS 24662020 24662179 . + 2 Parent=GSCOCT00011995001 | |
| 49674 chr10 manual_curation gene 24674449 24675342 . + . ID=GSCOCG00011997001;Name=Cc10_g14100 | |
| 49675 chr10 manual_curation mRNA 24674449 24675342 . + . ID=GSCOCT00011997001;Parent=GSCOCG00011997001;Name=Cc10_g14100 | |
| 49676 chr10 manual_curation polypeptide 24675157 24675342 . + . ID=GSCOCP00011997001;Derives_from=GSCOCT00011997001;Name=Cc10_g14100;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011997001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=115130..115315;owner=coffea | |
| 49677 chr10 manual_curation exon 24674449 24675342 . + . Parent=GSCOCT00011997001 | |
| 49678 chr10 manual_curation CDS 24675157 24675342 . + 0 Parent=GSCOCT00011997001 | |
| 49679 chr10 manual_curation gene 24675427 24678648 . + . ID=GSCOCG00011998001;Name=Cc10_g14110 | |
| 49680 chr10 manual_curation mRNA 24675427 24678648 . + . ID=GSCOCT00011998001;Parent=GSCOCG00011998001;Name=Cc10_g14110 | |
| 49681 chr10 manual_curation polypeptide 24676359 24678558 . + . ID=GSCOCP00011998001;Dbxref=InterPro:IPR006054,InterPro:IPR006055,InterPro:IPR012337,InterPro:IPR013520,PFAM:PF00929,SMART:SM00479,SUPERFAMILY:SSF53098,SwissProt:Q895K2,SwissProt:Q8RA32,SwissProt:Q8XJR3,TAIR:AT5G26940.1,TIGRFAMs:TIGR00573,TrEMBL:B9RFG4,TrEMBL:D7UA01,TrEMBL:I1NBT2;Derives_from=GSCOCT00011998001;Name=Cc10_g14110;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0003677,GO:0003887,GO:0004527,GO:0005622,GO:0006260,CC_EC_number:2.7.7.7,PRODUCT:Putative Polynucleotidyl transferase%2C ribonuclease H-like superfamily protein,CC_functional_completeness:complete,CC_gene:polC;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011998001~ Putative Polynucleotidyl transferase%2C ribonuclease H-like superfamily protein~ polC~ complete;original_location=join(116332..116894%2C117993..118198%2C118308..118531);owner=coffea | |
| 49682 chr10 manual_curation exon 24675427 24676921 . + . Parent=GSCOCT00011998001 | |
| 49683 chr10 manual_curation exon 24678020 24678225 . + . Parent=GSCOCT00011998001 | |
| 49684 chr10 manual_curation exon 24678335 24678648 . + . Parent=GSCOCT00011998001 | |
| 49685 chr10 manual_curation CDS 24676359 24676921 . + 0 Parent=GSCOCT00011998001 | |
| 49686 chr10 manual_curation CDS 24678020 24678225 . + 2 Parent=GSCOCT00011998001 | |
| 49687 chr10 manual_curation CDS 24678335 24678558 . + 1 Parent=GSCOCT00011998001 | |
| 49688 chr10 manual_curation gene 24690914 24692478 . + . ID=GSCOCG00011999001;Name=Cc10_g14120 | |
| 49689 chr10 manual_curation mRNA 24690914 24692478 . + . ID=GSCOCT00011999001;Parent=GSCOCG00011999001;Name=Cc10_g14120 | |
| 49690 chr10 manual_curation polypeptide 24690914 24692224 . + . ID=GSCOCP00011999001;Dbxref=GENE3D:G3DSA:1.25.10.10,InterPro:IPR003613,InterPro:IPR011989,InterPro:IPR016024,PFAM:PF04564,SMART:SM00504,SUPERFAMILY:SSF48371,SwissProt:Q9FLF4,SwissProt:Q9LSA6,SwissProt:Q9LXE3,TAIR:AT3G18710.1,TAIR:AT5G09800.1,TAIR:AT5G64660.1,TrEMBL:F6I0G9,TrEMBL:I1KTF9,TrEMBL:Q9AR60;Derives_from=GSCOCT00011999001;Name=Cc10_g14120;Ontology_term=CC_evidence_code:ISS,GO:0000151,GO:0004842,GO:0005488,GO:0016567,CC_EC_number:missing_EC_number,PRODUCT:Putative U-box domain-containing protein 28,CC_functional_completeness:complete,CC_gene:PUB28,CC_gene:PUB29,CC_gene:PUB27;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011999001~ Putative U-box domain-containing protein 28~ PUB28~ complete;original_location=130887..132197;owner=coffea | |
| 49691 chr10 manual_curation exon 24690914 24692478 . + . Parent=GSCOCT00011999001 | |
| 49692 chr10 manual_curation CDS 24690914 24692224 . + 0 Parent=GSCOCT00011999001 | |
| 49693 chr10 manual_curation gene 24696427 24700630 . + . ID=GSCOCG00012000001;Name=Cc10_g14130 | |
| 49694 chr10 manual_curation mRNA 24696427 24700630 . + . ID=GSCOCT00012000001;Parent=GSCOCG00012000001;Name=Cc10_g14130 | |
| 49695 chr10 manual_curation polypeptide 24696515 24697780 . + . ID=GSCOCP00012000001;Dbxref=InterPro:IPR001993,InterPro:IPR018108,PANTHER:PTHR11896,PFAM:PF00153,PROFILE:PS50920,SUPERFAMILY:SSF103506,SwissProt:P23500,SwissProt:Q4V9P0,SwissProt:Q9FHX2,TAIR:AT1G34065.1,TAIR:AT4G11440.1,TAIR:AT5G42130.1,TrEMBL:B9H7Q1,TrEMBL:B9SJF9,TrEMBL:F6HW85;Derives_from=GSCOCT00012000001;Name=Cc10_g14130;Ontology_term=CC_evidence_code:ISS,GO:0005488,GO:0006810,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Protein MITOFERRINLIKE 1%2C chloroplastic,CC_functional_completeness:complete,CC_gene:MFL1,CC_gene:MRS4,CC_gene:slc25a26;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012000001~ Protein MITOFERRINLIKE 1%2C chloroplastic~ MFL1~ complete;original_location=136488..137753;owner=coffea | |
| 49696 chr10 manual_curation exon 24700100 24700630 . + . Parent=GSCOCT00012000001 | |
| 49697 chr10 manual_curation exon 24696427 24697813 . + . Parent=GSCOCT00012000001 | |
| 49698 chr10 manual_curation CDS 24696515 24697780 . + 0 Parent=GSCOCT00012000001 | |
| 49699 chr10 manual_curation gene 24701766 24703886 . + . ID=GSCOCG00012001001;Name=Cc10_g14140 | |
| 49700 chr10 manual_curation mRNA 24701766 24703886 . + . ID=GSCOCT00012001001;Parent=GSCOCG00012001001;Name=Cc10_g14140 | |
| 49701 chr10 manual_curation polypeptide 24701766 24703886 . + . ID=GSCOCP00012001001;Dbxref=GENE3D:G3DSA:2.60.120.200,InterPro:IPR000719,InterPro:IPR001220,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR008985,InterPro:IPR011009,InterPro:IPR013320,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR019825,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00139,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,PROSITE:PS00307,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF49899,SUPERFAMILY:SSF56112,SwissProt:Q9FHG4,SwissProt:Q9FHX3,SwissProt:Q9LYX1,TAIR:AT5G03140.1,TAIR:AT5G42120.1,TAIR:AT5G55830.1,TrEMBL:B9H7Q0,TrEMBL:B9SJG0,TrEMBL:G7ID26;Derives_from=GSCOCT00012001001;Name=Cc10_g14140;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005488,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:L-type lectin-domain containing receptor kinase S.6,CC_functional_completeness:complete,CC_gene:LECRKS6,CC_gene:LECRKS7,CC_gene:LECRK82;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012001001~ L-type lectin-domain containing receptor kinase S.6~ LECRKS6~ complete;original_location=141739..143859;owner=coffea | |
| 49702 chr10 manual_curation exon 24701766 24703886 . + . Parent=GSCOCT00012001001 | |
| 49703 chr10 manual_curation CDS 24701766 24703886 . + 0 Parent=GSCOCT00012001001 | |
| 49704 chr10 manual_curation gene 24706554 24708608 . + . ID=GSCOCG00012002001;Name=Cc10_g14150 | |
| 49705 chr10 manual_curation mRNA 24706554 24708608 . + . ID=GSCOCT00012002001;Parent=GSCOCG00012002001;Name=Cc10_g14150 | |
| 49706 chr10 manual_curation polypeptide 24707805 24708608 . + . ID=GSCOCP00012002001;Dbxref=GENE3D:G3DSA:3.30.730.10,InterPro:IPR001471,InterPro:IPR016177,PFAM:PF00847,PRINTS:PR00367,PROFILE:PS51032,SMART:SM00380,SUPERFAMILY:SSF54171,SwissProt:A2WL19,SwissProt:Q0JQF7,SwissProt:Q8LFR2,TAIR:AT2G40340.1,TAIR:AT2G40350.1,TAIR:AT5G05410.1,TrEMBL:B9S475,TrEMBL:Q8GZF2,TrEMBL:Q9LEM7;Derives_from=GSCOCT00012002001;Name=Cc10_g14150;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:DREB2A,CC_gene:DREB2C;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012002001~ Hypothetical protein~ DREB2A~ missing_functional_completeness;original_location=join(147778..148368%2C148468..148581);owner=coffea | |
| 49707 chr10 manual_curation exon 24706554 24706691 . + . Parent=GSCOCT00012002001 | |
| 49708 chr10 manual_curation exon 24707765 24708395 . + . Parent=GSCOCT00012002001 | |
| 49709 chr10 manual_curation exon 24708495 24708608 . + . Parent=GSCOCT00012002001 | |
| 49710 chr10 manual_curation CDS 24707805 24708395 . + 0 Parent=GSCOCT00012002001 | |
| 49711 chr10 manual_curation CDS 24708495 24708608 . + 0 Parent=GSCOCT00012002001 | |
| 49712 chr10 manual_curation gene 24711398 24714563 . + . ID=GSCOCG00012004001;Name=Cc10_g14160 | |
| 49713 chr10 manual_curation mRNA 24711398 24714563 . + . ID=GSCOCT00012004001;Parent=GSCOCG00012004001;Name=Cc10_g14160 | |
| 49714 chr10 manual_curation polypeptide 24711474 24714092 . + . ID=GSCOCP00012004001;Derives_from=GSCOCT00012004001;Name=Cc10_g14160;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012004001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(151447..151518%2C151602..151681%2C152791..153217%2C153824..153890%2C153980..154065);owner=coffea | |
| 49715 chr10 manual_curation exon 24711398 24711545 . + . Parent=GSCOCT00012004001 | |
| 49716 chr10 manual_curation exon 24711629 24711708 . + . Parent=GSCOCT00012004001 | |
| 49717 chr10 manual_curation exon 24712818 24713244 . + . Parent=GSCOCT00012004001 | |
| 49718 chr10 manual_curation exon 24713851 24713917 . + . Parent=GSCOCT00012004001 | |
| 49719 chr10 manual_curation exon 24714007 24714563 . + . Parent=GSCOCT00012004001 | |
| 49720 chr10 manual_curation CDS 24711474 24711545 . + 0 Parent=GSCOCT00012004001 | |
| 49721 chr10 manual_curation CDS 24711629 24711708 . + 0 Parent=GSCOCT00012004001 | |
| 49722 chr10 manual_curation CDS 24712818 24713244 . + 2 Parent=GSCOCT00012004001 | |
| 49723 chr10 manual_curation CDS 24713851 24713917 . + 0 Parent=GSCOCT00012004001 | |
| 49724 chr10 manual_curation CDS 24714007 24714092 . + 1 Parent=GSCOCT00012004001 | |
| 49725 chr10 manual_curation gene 24716339 24717766 . + . ID=GSCOCG00012005001;Name=Cc10_g14170 | |
| 49726 chr10 manual_curation mRNA 24716339 24717766 . + . ID=GSCOCT00012005001;Parent=GSCOCG00012005001;Name=Cc10_g14170 | |
| 49727 chr10 manual_curation polypeptide 24717476 24717766 . + . ID=GSCOCP00012005001;Derives_from=GSCOCT00012005001;Name=Cc10_g14170;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012005001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=157449..157739;owner=coffea | |
| 49728 chr10 manual_curation exon 24716339 24717766 . + . Parent=GSCOCT00012005001 | |
| 49729 chr10 manual_curation CDS 24717476 24717766 . + 0 Parent=GSCOCT00012005001 | |
| 49730 chr10 manual_curation gene 24718860 24721889 . + . ID=GSCOCG00012006001;Name=Cc10_g14180 | |
| 49731 chr10 manual_curation mRNA 24718860 24721889 . + . ID=GSCOCT00012006001;Parent=GSCOCG00012006001;Name=Cc10_g14180 | |
| 49732 chr10 manual_curation polypeptide 24718860 24721431 . + . ID=GSCOCP00012006001;Dbxref=TAIR:AT1G43770.2,TAIR:AT3G02890.1,TAIR:AT5G16680.1,TrEMBL:B9H7B0,TrEMBL:B9H7P9,TrEMBL:G7KJI9;Derives_from=GSCOCT00012006001;Name=Cc10_g14180;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012006001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(158833..158984%2C159413..160636%2C160756..160980%2C161069..161193%2C161280..161404);owner=coffea | |
| 49733 chr10 manual_curation exon 24718860 24719011 . + . Parent=GSCOCT00012006001 | |
| 49734 chr10 manual_curation exon 24719440 24720663 . + . Parent=GSCOCT00012006001 | |
| 49735 chr10 manual_curation exon 24720783 24721007 . + . Parent=GSCOCT00012006001 | |
| 49736 chr10 manual_curation exon 24721096 24721220 . + . Parent=GSCOCT00012006001 | |
| 49737 chr10 manual_curation exon 24721307 24721889 . + . Parent=GSCOCT00012006001 | |
| 49738 chr10 manual_curation CDS 24718860 24719011 . + 0 Parent=GSCOCT00012006001 | |
| 49739 chr10 manual_curation CDS 24719440 24720663 . + 2 Parent=GSCOCT00012006001 | |
| 49740 chr10 manual_curation CDS 24720783 24721007 . + 2 Parent=GSCOCT00012006001 | |
| 49741 chr10 manual_curation CDS 24721096 24721220 . + 2 Parent=GSCOCT00012006001 | |
| 49742 chr10 manual_curation CDS 24721307 24721431 . + 1 Parent=GSCOCT00012006001 | |
| 49743 chr10 manual_curation gene 24727381 24728070 . - . ID=GSCOCG00012008001;Name=Cc10_g14190 | |
| 49744 chr10 manual_curation mRNA 24727381 24728070 . - . ID=GSCOCT00012008001;Parent=GSCOCG00012008001;Name=Cc10_g14190 | |
| 49745 chr10 manual_curation polypeptide 24727381 24728070 . - . ID=GSCOCP00012008001;Dbxref=InterPro:IPR008889,PFAM:PF05678,SwissProt:Q8LGD5,TAIR:AT1G21320.1,TAIR:AT1G21326.1,TAIR:AT3G18690.1,TrEMBL:B9GTL2,TrEMBL:B9H7P8,TrEMBL:B9SJG7;Derives_from=GSCOCT00012008001;Name=Cc10_g14190;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein MKS1,CC_functional_completeness:complete,CC_gene:MKS1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012008001~ Putative Protein MKS1~ MKS1~ complete;original_location=complement(167354..168043);owner=coffea | |
| 49746 chr10 manual_curation exon 24727381 24728070 . - . Parent=GSCOCT00012008001 | |
| 49747 chr10 manual_curation CDS 24727381 24728070 . - 0 Parent=GSCOCT00012008001 | |
| 49748 chr10 manual_curation gene 24787234 24788088 . + . ID=GSCOCG00012009001;Name=Cc10_g14200 | |
| 49749 chr10 manual_curation mRNA 24787234 24788088 . + . ID=GSCOCT00012009001;Parent=GSCOCG00012009001;Name=Cc10_g14200 | |
| 49750 chr10 manual_curation polypeptide 24787234 24788088 . + . ID=GSCOCP00012009001;Dbxref=InterPro:IPR003851,PFAM:PF02701,PRODOM:PD007478,PROFILE:PS50884,PROSITE:PS01361,SwissProt:P68349,SwissProt:Q84TE9,SwissProt:Q9SVC5,TAIR:AT1G21340.1,TAIR:AT3G52440.1,TAIR:AT5G60200.1,TrEMBL:B9GTL3,TrEMBL:B9H7P5,TrEMBL:B9SJH7;Derives_from=GSCOCT00012009001;Name=Cc10_g14200;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0008270,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative Dof zinc finger protein DOF3.5,CC_functional_completeness:complete,CC_gene:DOF1.2,CC_gene:DOF3.5,CC_gene:DOF5.3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012009001~ Putative Dof zinc finger protein DOF3.5~ DOF1.2~ complete;original_location=227207..228061;owner=coffea | |
| 49751 chr10 manual_curation exon 24787234 24788088 . + . Parent=GSCOCT00012009001 | |
| 49752 chr10 manual_curation CDS 24787234 24788088 . + 0 Parent=GSCOCT00012009001 | |
| 49753 chr10 manual_curation gene 24826567 24831136 . + . ID=GSCOCG00012011001;Name=Cc10_g14210 | |
| 49754 chr10 manual_curation mRNA 24826567 24831136 . + . ID=GSCOCT00012011001;Parent=GSCOCG00012011001;Name=Cc10_g14210 | |
| 49755 chr10 manual_curation polypeptide 24826628 24830256 . + . ID=GSCOCP00012011001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:C0LGR3,SwissProt:C0LGV1,SwissProt:Q9LHP4,TAIR:AT3G24240.1,TAIR:AT5G48940.1,TAIR:AT5G56040.2,TrEMBL:B9H7P4,TrEMBL:B9SJH8,TrEMBL:F6GZV3;Derives_from=GSCOCT00012011001;Name=Cc10_g14210;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:LRR receptor-like serine/threonine-protein kinase RCH1,CC_functional_completeness:complete,CC_gene:RCH1,CC_gene:RCH2,CC_gene:At4g26540;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012011001~ LRR receptor-like serine/threonine-protein kinase RCH1~ RCH1~ complete;original_location=join(266601..266637%2C266680..269403%2C269772..270229);owner=coffea | |
| 49756 chr10 manual_curation exon 24826567 24826664 . + . Parent=GSCOCT00012011001 | |
| 49757 chr10 manual_curation exon 24826707 24829430 . + . Parent=GSCOCT00012011001 | |
| 49758 chr10 manual_curation exon 24829799 24831136 . + . Parent=GSCOCT00012011001 | |
| 49759 chr10 manual_curation CDS 24826628 24826664 . + 0 Parent=GSCOCT00012011001 | |
| 49760 chr10 manual_curation CDS 24826707 24829430 . + 1 Parent=GSCOCT00012011001 | |
| 49761 chr10 manual_curation CDS 24829799 24830256 . + 1 Parent=GSCOCT00012011001 | |
| 49762 chr10 manual_curation gene 24831385 24840870 . - . ID=GSCOCG00012012001;Name=Cc10_g14220 | |
| 49763 chr10 manual_curation mRNA 24831385 24840870 . - . ID=GSCOCT00012012001;Parent=GSCOCG00012012001;Name=Cc10_g14220 | |
| 49764 chr10 manual_curation polypeptide 24832022 24840870 . - . ID=GSCOCP00012012001;Dbxref=GENE3D:G3DSA:3.40.30.10,InterPro:IPR000866,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR017936,PFAM:PF00578,PROFILE:PS51352,SUPERFAMILY:SSF52833,TAIR:AT1G21350.3,TrEMBL:B9SJH9,TrEMBL:F6H0A8,TrEMBL:I1JYW6;Derives_from=GSCOCT00012012001;Name=Cc10_g14220;Ontology_term=CC_evidence_code:ISS,GO:0016209,GO:0016491,GO:0045454,CC_EC_number:missing_EC_number,PRODUCT:Thioredoxin superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012012001~ Thioredoxin superfamily protein~ unknown_gene~ complete;original_location=complement(join(280610..280843%2C280225..280290%2C276459..276539%2C276295..276348%2C276145..276213%2C272617..272679%2C272339..272421%2C272165..272230%2C271995..272037));owner=coffea | |
| 49765 chr10 manual_curation exon 24831385 24831566 . - . Parent=GSCOCT00012012001 | |
| 49766 chr10 manual_curation exon 24831993 24832064 . - . Parent=GSCOCT00012012001 | |
| 49767 chr10 manual_curation exon 24832192 24832257 . - . Parent=GSCOCT00012012001 | |
| 49768 chr10 manual_curation exon 24832366 24832448 . - . Parent=GSCOCT00012012001 | |
| 49769 chr10 manual_curation exon 24832644 24832706 . - . Parent=GSCOCT00012012001 | |
| 49770 chr10 manual_curation exon 24836172 24836240 . - . Parent=GSCOCT00012012001 | |
| 49771 chr10 manual_curation exon 24836322 24836375 . - . Parent=GSCOCT00012012001 | |
| 49772 chr10 manual_curation exon 24836486 24836566 . - . Parent=GSCOCT00012012001 | |
| 49773 chr10 manual_curation exon 24840252 24840317 . - . Parent=GSCOCT00012012001 | |
| 49774 chr10 manual_curation exon 24840637 24840870 . - . Parent=GSCOCT00012012001 | |
| 49775 chr10 manual_curation CDS 24832022 24832064 . - 2 Parent=GSCOCT00012012001 | |
| 49776 chr10 manual_curation CDS 24832192 24832257 . - 2 Parent=GSCOCT00012012001 | |
| 49777 chr10 manual_curation CDS 24832366 24832448 . - 0 Parent=GSCOCT00012012001 | |
| 49778 chr10 manual_curation CDS 24832644 24832706 . - 0 Parent=GSCOCT00012012001 | |
| 49779 chr10 manual_curation CDS 24836172 24836240 . - 0 Parent=GSCOCT00012012001 | |
| 49780 chr10 manual_curation CDS 24836322 24836375 . - 0 Parent=GSCOCT00012012001 | |
| 49781 chr10 manual_curation CDS 24836486 24836566 . - 0 Parent=GSCOCT00012012001 | |
| 49782 chr10 manual_curation CDS 24840252 24840317 . - 0 Parent=GSCOCT00012012001 | |
| 49783 chr10 manual_curation CDS 24840637 24840870 . - 0 Parent=GSCOCT00012012001 | |
| 49784 chr10 manual_curation gene 24846465 24849643 . + . ID=GSCOCG00012013001;Name=Cc10_g14230 | |
| 49785 chr10 manual_curation mRNA 24846465 24849643 . + . ID=GSCOCT00012013001;Parent=GSCOCG00012013001;Name=Cc10_g14230 | |
| 49786 chr10 manual_curation polypeptide 24846706 24849415 . + . ID=GSCOCP00012013001;Dbxref=InterPro:IPR014830,PFAM:PF08718,SUPERFAMILY:SSF110004,SwissProt:O95397,SwissProt:Q80W71,SwissProt:Q96JA3,TAIR:AT1G21360.1,TAIR:AT2G33470.1,TAIR:AT3G21260.3,TrEMBL:B9GTL7,TrEMBL:E0CQQ2,TrEMBL:I1KAL1;Derives_from=GSCOCT00012013001;Name=Cc10_g14230;Ontology_term=CC_evidence_code:ISS,GO:0005737,GO:0017089,GO:0046836,GO:0051861,CC_EC_number:missing_EC_number,PRODUCT:glycolipid transfer protein 2,CC_functional_completeness:complete,CC_gene:Plekha8,CC_gene:PLEKHA8,CC_gene:PLEKHA8P1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012013001~ glycolipid transfer protein 2~ Plekha8~ complete;original_location=join(286679..286853%2C287053..287108%2C287589..287719%2C288671..288806%2C289098..289241%2C289353..289388);owner=coffea | |
| 49787 chr10 manual_curation exon 24846465 24846880 . + . Parent=GSCOCT00012013001 | |
| 49788 chr10 manual_curation exon 24847080 24847135 . + . Parent=GSCOCT00012013001 | |
| 49789 chr10 manual_curation exon 24847616 24847746 . + . Parent=GSCOCT00012013001 | |
| 49790 chr10 manual_curation exon 24848698 24848833 . + . Parent=GSCOCT00012013001 | |
| 49791 chr10 manual_curation exon 24849125 24849268 . + . Parent=GSCOCT00012013001 | |
| 49792 chr10 manual_curation exon 24849380 24849643 . + . Parent=GSCOCT00012013001 | |
| 49793 chr10 manual_curation CDS 24846706 24846880 . + 0 Parent=GSCOCT00012013001 | |
| 49794 chr10 manual_curation CDS 24847080 24847135 . + 1 Parent=GSCOCT00012013001 | |
| 49795 chr10 manual_curation CDS 24847616 24847746 . + 0 Parent=GSCOCT00012013001 | |
| 49796 chr10 manual_curation CDS 24848698 24848833 . + 2 Parent=GSCOCT00012013001 | |
| 49797 chr10 manual_curation CDS 24849125 24849268 . + 0 Parent=GSCOCT00012013001 | |
| 49798 chr10 manual_curation CDS 24849380 24849415 . + 0 Parent=GSCOCT00012013001 | |
| 49799 chr10 manual_curation gene 24850291 24852713 . - . ID=GSCOCG00012014001;Name=Cc10_g14240 | |
| 49800 chr10 manual_curation mRNA 24850291 24852713 . - . ID=GSCOCT00012014001;Parent=GSCOCG00012014001;Name=Cc10_g14240 | |
| 49801 chr10 manual_curation polypeptide 24850291 24852713 . - . ID=GSCOCP00012014001;Dbxref=GENE3D:G3DSA:1.50.10.10,InterPro:IPR001701,InterPro:IPR008928,InterPro:IPR012341,PANTHER:PTHR22298:SF3,PFAM:PF00759,SUPERFAMILY:SSF48208,SwissProt:O04478,SwissProt:P0C1U4,SwissProt:Q38890,TAIR:AT1G65610.1,TAIR:AT4G24260.1,TAIR:AT5G49720.1,TrEMBL:A5AP39,TrEMBL:B9SJI2,TrEMBL:Q6W6R7;Derives_from=GSCOCT00012014001;Name=Cc10_g14240;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,CC_EC_number:3.2.1.4,PRODUCT:Putative Endoglucanase 25,CC_functional_completeness:complete,CC_gene:KOR,CC_gene:GLU1,CC_gene:KOR2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012014001~ Putative Endoglucanase 25~ KOR~ complete;original_location=complement(join(292293..292686%2C291875..292182%2C291295..291783%2C291079..291211%2C290835..291007%2C290264..290665));owner=coffea | |
| 49802 chr10 manual_curation exon 24850291 24850692 . - . Parent=GSCOCT00012014001 | |
| 49803 chr10 manual_curation exon 24850862 24851034 . - . Parent=GSCOCT00012014001 | |
| 49804 chr10 manual_curation exon 24851106 24851238 . - . Parent=GSCOCT00012014001 | |
| 49805 chr10 manual_curation exon 24851322 24851810 . - . Parent=GSCOCT00012014001 | |
| 49806 chr10 manual_curation exon 24851902 24852209 . - . Parent=GSCOCT00012014001 | |
| 49807 chr10 manual_curation exon 24852320 24852713 . - . Parent=GSCOCT00012014001 | |
| 49808 chr10 manual_curation CDS 24850291 24850692 . - 0 Parent=GSCOCT00012014001 | |
| 49809 chr10 manual_curation CDS 24850862 24851034 . - 1 Parent=GSCOCT00012014001 | |
| 49810 chr10 manual_curation CDS 24851106 24851238 . - 0 Parent=GSCOCT00012014001 | |
| 49811 chr10 manual_curation CDS 24851322 24851810 . - 0 Parent=GSCOCT00012014001 | |
| 49812 chr10 manual_curation CDS 24851902 24852209 . - 1 Parent=GSCOCT00012014001 | |
| 49813 chr10 manual_curation CDS 24852320 24852713 . - 0 Parent=GSCOCT00012014001 | |
| 49814 chr10 manual_curation gene 24854525 24858370 . + . ID=GSCOCG00012015001;Name=Cc10_g14250 | |
| 49815 chr10 manual_curation mRNA 24854525 24858370 . + . ID=GSCOCT00012015001;Parent=GSCOCG00012015001;Name=Cc10_g14250 | |
| 49816 chr10 manual_curation polypeptide 24855026 24858081 . + . ID=GSCOCP00012015001;Dbxref=SwissProt:P87055,SwissProt:Q08634,TAIR:AT1G21370.1,TrEMBL:A5BK22,TrEMBL:B9SJI3,TrEMBL:E0CQQ0;Derives_from=GSCOCT00012015001;Name=Cc10_g14250;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized protein C57A10.07,CC_functional_completeness:complete,CC_gene:SPAC57A10.07,CC_gene:YOR238W;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012015001~ Putative Uncharacterized protein C57A10.07~ SPAC57A10.07~ complete;original_location=join(294999..295029%2C295084..295611%2C297140..297264%2C297737..298054);owner=coffea | |
| 49817 chr10 manual_curation exon 24854525 24855056 . + . Parent=GSCOCT00012015001 | |
| 49818 chr10 manual_curation exon 24855111 24855638 . + . Parent=GSCOCT00012015001 | |
| 49819 chr10 manual_curation exon 24857167 24857291 . + . Parent=GSCOCT00012015001 | |
| 49820 chr10 manual_curation exon 24857764 24858370 . + . Parent=GSCOCT00012015001 | |
| 49821 chr10 manual_curation CDS 24855026 24855056 . + 0 Parent=GSCOCT00012015001 | |
| 49822 chr10 manual_curation CDS 24855111 24855638 . + 1 Parent=GSCOCT00012015001 | |
| 49823 chr10 manual_curation CDS 24857167 24857291 . + 1 Parent=GSCOCT00012015001 | |
| 49824 chr10 manual_curation CDS 24857764 24858081 . + 0 Parent=GSCOCT00012015001 | |
| 49825 chr10 manual_curation gene 24858805 24859892 . - . ID=GSCOCG00012016001;Name=Cc10_g14260 | |
| 49826 chr10 manual_curation mRNA 24858805 24859892 . - . ID=GSCOCT00012016001;Parent=GSCOCG00012016001;Name=Cc10_g14260 | |
| 49827 chr10 manual_curation polypeptide 24858805 24859853 . - . ID=GSCOCP00012016001;Dbxref=InterPro:IPR009959,PFAM:PF07366,SwissProt:P16273,TAIR:AT1G78780.2,TrEMBL:A9PIM1,TrEMBL:B9H7P1,TrEMBL:B9H7P2;Derives_from=GSCOCT00012016001;Name=Cc10_g14260;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pathogen-related protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012016001~ Pathogen-related protein~ unknown_gene~ complete;original_location=complement(join(299692..299826%2C299437..299569%2C299042..299349%2C298778..298924));owner=coffea | |
| 49828 chr10 manual_curation exon 24858805 24858951 . - . Parent=GSCOCT00012016001 | |
| 49829 chr10 manual_curation exon 24859069 24859376 . - . Parent=GSCOCT00012016001 | |
| 49830 chr10 manual_curation exon 24859464 24859596 . - . Parent=GSCOCT00012016001 | |
| 49831 chr10 manual_curation exon 24859719 24859892 . - . Parent=GSCOCT00012016001 | |
| 49832 chr10 manual_curation CDS 24858805 24858951 . - 0 Parent=GSCOCT00012016001 | |
| 49833 chr10 manual_curation CDS 24859069 24859376 . - 1 Parent=GSCOCT00012016001 | |
| 49834 chr10 manual_curation CDS 24859464 24859596 . - 0 Parent=GSCOCT00012016001 | |
| 49835 chr10 manual_curation CDS 24859719 24859853 . - 0 Parent=GSCOCT00012016001 | |
| 49836 chr10 manual_curation gene 24861845 24863003 . - . ID=GSCOCG00012017001;Name=Cc10_g14270 | |
| 49837 chr10 manual_curation mRNA 24861845 24863003 . - . ID=GSCOCT00012017001;Parent=GSCOCG00012017001;Name=Cc10_g14270 | |
| 49838 chr10 manual_curation polypeptide 24861968 24862971 . - . ID=GSCOCP00012017001;Dbxref=SwissProt:P16273,TAIR:AT1G78780.2,TrEMBL:A9PIM1,TrEMBL:B9H7P1,TrEMBL:B9H7P2;Derives_from=GSCOCT00012017001;Name=Cc10_g14270;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pathogen-related protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012017001~ Pathogen-related protein~ unknown_gene~ complete;original_location=complement(join(302816..302944%2C302567..302699%2C302196..302497%2C301941..302081));owner=coffea | |
| 49839 chr10 manual_curation exon 24861845 24862108 . - . Parent=GSCOCT00012017001 | |
| 49840 chr10 manual_curation exon 24862223 24862524 . - . Parent=GSCOCT00012017001 | |
| 49841 chr10 manual_curation exon 24862594 24862726 . - . Parent=GSCOCT00012017001 | |
| 49842 chr10 manual_curation exon 24862843 24863003 . - . Parent=GSCOCT00012017001 | |
| 49843 chr10 manual_curation CDS 24861968 24862108 . - 0 Parent=GSCOCT00012017001 | |
| 49844 chr10 manual_curation CDS 24862223 24862524 . - 1 Parent=GSCOCT00012017001 | |
| 49845 chr10 manual_curation CDS 24862594 24862726 . - 0 Parent=GSCOCT00012017001 | |
| 49846 chr10 manual_curation CDS 24862843 24862971 . - 0 Parent=GSCOCT00012017001 | |
| 49847 chr10 manual_curation gene 24867564 24873707 . + . ID=GSCOCG00012018001;Name=Cc10_g14280 | |
| 49848 chr10 manual_curation mRNA 24867564 24873707 . + . ID=GSCOCT00012018001;Parent=GSCOCG00012018001;Name=Cc10_g14280 | |
| 49849 chr10 manual_curation polypeptide 24867564 24873215 . + . ID=GSCOCP00012018001;Dbxref=InterPro:IPR005178,PANTHER:PTHR23423,PFAM:PF03619,SwissProt:Q17QL9,SwissProt:Q5RET6,SwissProt:Q9NVA4,TAIR:AT1G23070.1,TAIR:AT1G77220.1,TAIR:AT4G38360.2,TrEMBL:B9H7P0,TrEMBL:B9SJI5,TrEMBL:E0CQP6;Derives_from=GSCOCT00012018001;Name=Cc10_g14280;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF300),CC_functional_completeness:complete,CC_gene:TMEM184C;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012018001~ Protein of unknown function (DUF300)~ TMEM184C~ complete;original_location=join(307537..307752%2C308734..308790%2C309789..309897%2C310295..310479%2C310570..310658%2C310889..311144%2C312550..312795%2C312895..313188);owner=coffea | |
| 49850 chr10 manual_curation exon 24873337 24873707 . + . Parent=GSCOCT00012018001 | |
| 49851 chr10 manual_curation exon 24867564 24867779 . + . Parent=GSCOCT00012018001 | |
| 49852 chr10 manual_curation exon 24868761 24868817 . + . Parent=GSCOCT00012018001 | |
| 49853 chr10 manual_curation exon 24869816 24869924 . + . Parent=GSCOCT00012018001 | |
| 49854 chr10 manual_curation exon 24870322 24870506 . + . Parent=GSCOCT00012018001 | |
| 49855 chr10 manual_curation exon 24870597 24870685 . + . Parent=GSCOCT00012018001 | |
| 49856 chr10 manual_curation exon 24870916 24871171 . + . Parent=GSCOCT00012018001 | |
| 49857 chr10 manual_curation exon 24872577 24872822 . + . Parent=GSCOCT00012018001 | |
| 49858 chr10 manual_curation exon 24872922 24873253 . + . Parent=GSCOCT00012018001 | |
| 49859 chr10 manual_curation CDS 24867564 24867779 . + 0 Parent=GSCOCT00012018001 | |
| 49860 chr10 manual_curation CDS 24868761 24868817 . + 0 Parent=GSCOCT00012018001 | |
| 49861 chr10 manual_curation CDS 24869816 24869924 . + 0 Parent=GSCOCT00012018001 | |
| 49862 chr10 manual_curation CDS 24870322 24870506 . + 1 Parent=GSCOCT00012018001 | |
| 49863 chr10 manual_curation CDS 24870597 24870685 . + 0 Parent=GSCOCT00012018001 | |
| 49864 chr10 manual_curation CDS 24870916 24871171 . + 2 Parent=GSCOCT00012018001 | |
| 49865 chr10 manual_curation CDS 24872577 24872822 . + 0 Parent=GSCOCT00012018001 | |
| 49866 chr10 manual_curation CDS 24872922 24873215 . + 0 Parent=GSCOCT00012018001 | |
| 49867 chr10 manual_curation gene 24874936 24877349 . + . ID=GSCOCG00012019001;Name=Cc10_g14290 | |
| 49868 chr10 manual_curation mRNA 24874936 24877349 . + . ID=GSCOCT00012019001;Parent=GSCOCG00012019001;Name=Cc10_g14290 | |
| 49869 chr10 manual_curation polypeptide 24876039 24876908 . + . ID=GSCOCP00012019001;Dbxref=TAIR:AT4G31270.1,TrEMBL:F6H2V6,TrEMBL:O49577,TrEMBL:Q8GWR8;Derives_from=GSCOCT00012019001;Name=Cc10_g14290;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative sequence-specific DNA binding transcription factors,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012019001~ Putative sequence-specific DNA binding transcription factors~ unknown_gene~ complete;original_location=316012..316881;owner=coffea | |
| 49870 chr10 manual_curation exon 24874936 24875080 . + . Parent=GSCOCT00012019001 | |
| 49871 chr10 manual_curation exon 24876012 24877349 . + . Parent=GSCOCT00012019001 | |
| 49872 chr10 manual_curation CDS 24876039 24876908 . + 0 Parent=GSCOCT00012019001 | |
| 49873 chr10 manual_curation gene 24894148 24906322 . + . ID=GSCOCG00012021001;Name=Cc10_g14300 | |
| 49874 chr10 manual_curation mRNA 24894148 24906322 . + . ID=GSCOCT00012021001;Parent=GSCOCG00012021001;Name=Cc10_g14300 | |
| 49875 chr10 manual_curation polypeptide 24894171 24906322 . + . ID=GSCOCP00012021001;Dbxref=InterPro:IPR013596,PFAM:PF08387;Derives_from=GSCOCT00012021001;Name=Cc10_g14300;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012021001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(334144..334272%2C334383..334677%2C335005..335070%2C346102..346295);owner=coffea | |
| 49876 chr10 manual_curation exon 24894148 24894299 . + . Parent=GSCOCT00012021001 | |
| 49877 chr10 manual_curation exon 24894410 24894704 . + . Parent=GSCOCT00012021001 | |
| 49878 chr10 manual_curation exon 24895032 24895097 . + . Parent=GSCOCT00012021001 | |
| 49879 chr10 manual_curation exon 24906129 24906322 . + . Parent=GSCOCT00012021001 | |
| 49880 chr10 manual_curation CDS 24894171 24894299 . + 0 Parent=GSCOCT00012021001 | |
| 49881 chr10 manual_curation CDS 24894410 24894704 . + 0 Parent=GSCOCT00012021001 | |
| 49882 chr10 manual_curation CDS 24895032 24895097 . + 1 Parent=GSCOCT00012021001 | |
| 49883 chr10 manual_curation CDS 24906129 24906322 . + 1 Parent=GSCOCT00012021001 | |
| 49884 chr10 manual_curation gene 24909730 24910643 . + . ID=GSCOCG00012022001;Name=Cc10_g14310 | |
| 49885 chr10 manual_curation mRNA 24909730 24910643 . + . ID=GSCOCT00012022001;Parent=GSCOCG00012022001;Name=Cc10_g14310 | |
| 49886 chr10 manual_curation polypeptide 24909730 24910643 . + . ID=GSCOCP00012022001;Dbxref=InterPro:IPR006502,PFAM:PF04720,TAIR:AT1G77145.1,TAIR:AT1G77160.1,TAIR:AT2G38820.2,TIGRFAMs:TIGR01615,TrEMBL:B9GTM2,TrEMBL:B9H7N9,TrEMBL:B9HEJ7;Derives_from=GSCOCT00012022001;Name=Cc10_g14310;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of unknown function (DUF506) ,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012022001~ Putative Protein of unknown function (DUF506) ~ unknown_gene~ complete;original_location=join(349703..349831%2C349954..350131%2C350285..350616);owner=coffea | |
| 49887 chr10 manual_curation exon 24909730 24909858 . + . Parent=GSCOCT00012022001 | |
| 49888 chr10 manual_curation exon 24909981 24910158 . + . Parent=GSCOCT00012022001 | |
| 49889 chr10 manual_curation exon 24910312 24910643 . + . Parent=GSCOCT00012022001 | |
| 49890 chr10 manual_curation CDS 24909730 24909858 . + 0 Parent=GSCOCT00012022001 | |
| 49891 chr10 manual_curation CDS 24909981 24910158 . + 0 Parent=GSCOCT00012022001 | |
| 49892 chr10 manual_curation CDS 24910312 24910643 . + 1 Parent=GSCOCT00012022001 | |
| 49893 chr10 manual_curation gene 24922328 24923286 . - . ID=GSCOCG00012023001;Name=Cc10_g14320 | |
| 49894 chr10 manual_curation mRNA 24922328 24923286 . - . ID=GSCOCT00012023001;Parent=GSCOCG00012023001;Name=Cc10_g14320 | |
| 49895 chr10 manual_curation polypeptide 24922328 24923286 . - . ID=GSCOCP00012023001;Dbxref=GENE3D:G3DSA:2.60.40.420,InterPro:IPR003245,InterPro:IPR008972,PFAM:PF02298,SUPERFAMILY:SSF49503,TAIR:AT2G15770.1,TAIR:AT2G15780.1,TAIR:AT4G33930.1,TrEMBL:A5AWI3,TrEMBL:A5AWI4,TrEMBL:F6H1E4;Derives_from=GSCOCT00012023001;Name=Cc10_g14320;Ontology_term=CC_evidence_code:ISS,GO:0005507,GO:0009055,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012023001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=complement(join(363085..363259%2C362301..362566));owner=coffea | |
| 49896 chr10 manual_curation exon 24922328 24922593 . - . Parent=GSCOCT00012023001 | |
| 49897 chr10 manual_curation exon 24923112 24923286 . - . Parent=GSCOCT00012023001 | |
| 49898 chr10 manual_curation CDS 24922328 24922593 . - 1 Parent=GSCOCT00012023001 | |
| 49899 chr10 manual_curation CDS 24923112 24923286 . - 0 Parent=GSCOCT00012023001 | |
| 49900 chr10 manual_curation gene 24929213 24930871 . - . ID=GSCOCG00012024001;Name=Cc10_g14330 | |
| 49901 chr10 manual_curation mRNA 24929213 24930871 . - . ID=GSCOCT00012024001;Parent=GSCOCG00012024001;Name=Cc10_g14330 | |
| 49902 chr10 manual_curation polypeptide 24929462 24930819 . - . ID=GSCOCP00012024001;Dbxref=GENE3D:G3DSA:2.60.40.420,InterPro:IPR003245,InterPro:IPR008972,PFAM:PF02298,SUPERFAMILY:SSF49503,TAIR:AT2G15770.1,TAIR:AT2G15780.1,TAIR:AT4G33930.1,TrEMBL:A5AWI3,TrEMBL:A5AWI4,TrEMBL:F6H1E4;Derives_from=GSCOCT00012024001;Name=Cc10_g14330;Ontology_term=CC_evidence_code:ISS,GO:0005507,GO:0009055,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012024001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=complement(join(370618..370792%2C369435..369691));owner=coffea | |
| 49903 chr10 manual_curation exon 24929213 24929718 . - . Parent=GSCOCT00012024001 | |
| 49904 chr10 manual_curation exon 24930645 24930871 . - . Parent=GSCOCT00012024001 | |
| 49905 chr10 manual_curation CDS 24929462 24929718 . - 1 Parent=GSCOCT00012024001 | |
| 49906 chr10 manual_curation CDS 24930645 24930819 . - 0 Parent=GSCOCT00012024001 | |
| 49907 chr10 manual_curation gene 24937886 24938829 . - . ID=GSCOCG00012025001;Name=Cc10_g14340 | |
| 49908 chr10 manual_curation mRNA 24937886 24938829 . - . ID=GSCOCT00012025001;Parent=GSCOCG00012025001;Name=Cc10_g14340 | |
| 49909 chr10 manual_curation polypeptide 24937886 24938829 . - . ID=GSCOCP00012025001;Dbxref=GENE3D:G3DSA:2.60.40.420,InterPro:IPR003245,InterPro:IPR008972,PFAM:PF02298,SUPERFAMILY:SSF49503,TAIR:AT2G15770.1,TAIR:AT2G15780.1,TAIR:AT4G33930.1,TrEMBL:A5AWI3,TrEMBL:A5AWI4,TrEMBL:F6H1E4;Derives_from=GSCOCT00012025001;Name=Cc10_g14340;Ontology_term=CC_evidence_code:ISS,GO:0005507,GO:0009055,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012025001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=complement(join(378628..378802%2C377859..378115));owner=coffea | |
| 49910 chr10 manual_curation exon 24937886 24938142 . - . Parent=GSCOCT00012025001 | |
| 49911 chr10 manual_curation exon 24938655 24938829 . - . Parent=GSCOCT00012025001 | |
| 49912 chr10 manual_curation CDS 24937886 24938142 . - 1 Parent=GSCOCT00012025001 | |
| 49913 chr10 manual_curation CDS 24938655 24938829 . - 0 Parent=GSCOCT00012025001 | |
| 49914 chr10 manual_curation gene 24969363 24971104 . + . ID=GSCOCG00012028001;Name=Cc10_g14350 | |
| 49915 chr10 manual_curation mRNA 24969363 24971104 . + . ID=GSCOCT00012028001;Parent=GSCOCG00012028001;Name=Cc10_g14350 | |
| 49916 chr10 manual_curation polypeptide 24970592 24971104 . + . ID=GSCOCP00012028001;Dbxref=InterPro:IPR005174,PFAM:PF03478;Derives_from=GSCOCT00012028001;Name=Cc10_g14350;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of unknown function DUF295,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012028001~ Putative Protein of unknown function DUF295~ unknown_gene~ complete;original_location=410565..411077;owner=coffea | |
| 49917 chr10 manual_curation exon 24969363 24971104 . + . Parent=GSCOCT00012028001 | |
| 49918 chr10 manual_curation CDS 24970592 24971104 . + 0 Parent=GSCOCT00012028001 | |
| 49919 chr10 manual_curation gene 24976713 24978001 . - . ID=GSCOCG00012030001;Name=Cc10_g14360 | |
| 49920 chr10 manual_curation mRNA 24976713 24978001 . - . ID=GSCOCT00012030001;Parent=GSCOCG00012030001;Name=Cc10_g14360 | |
| 49921 chr10 manual_curation polypeptide 24976713 24978001 . - . ID=GSCOCP00012030001;Dbxref=InterPro:IPR000834,PFAM:PF00246,TAIR:AT5G42320.1,TrEMBL:B9R8M1,TrEMBL:D7UD93,TrEMBL:Q9FGZ7;Derives_from=GSCOCT00012030001;Name=Cc10_g14360;Ontology_term=CC_evidence_code:ISS,GO:0004181,GO:0006508,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative Peptidase M14%2C carboxypeptidase A,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012030001~ Putative Peptidase M14%2C carboxypeptidase A~ unknown_gene~ complete;original_location=complement(join(417779..417974%2C417075..417174%2C416686..416815));owner=coffea | |
| 49922 chr10 manual_curation exon 24976713 24976842 . - . Parent=GSCOCT00012030001 | |
| 49923 chr10 manual_curation exon 24977102 24977201 . - . Parent=GSCOCT00012030001 | |
| 49924 chr10 manual_curation exon 24977806 24978001 . - . Parent=GSCOCT00012030001 | |
| 49925 chr10 manual_curation CDS 24976713 24976842 . - 2 Parent=GSCOCT00012030001 | |
| 49926 chr10 manual_curation CDS 24977102 24977201 . - 1 Parent=GSCOCT00012030001 | |
| 49927 chr10 manual_curation CDS 24977806 24978001 . - 0 Parent=GSCOCT00012030001 | |
| 49928 chr10 manual_curation gene 24999777 25001431 . - . ID=GSCOCG00012032001;Name=Cc10_g14370 | |
| 49929 chr10 manual_curation mRNA 24999777 25001431 . - . ID=GSCOCT00012032001;Parent=GSCOCG00012032001;Name=Cc10_g14370 | |
| 49930 chr10 manual_curation polypeptide 24999777 25001431 . - . ID=GSCOCP00012032001;Dbxref=SwissProt:Q9FVS1,TAIR:AT1G57790.1,TrEMBL:B9T2T6,TrEMBL:Q6ZCS3,TrEMBL:Q6ZLE2;Derives_from=GSCOCT00012032001;Name=Cc10_g14370;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative F-box/kelch-repeat protein At1g57790,CC_functional_completeness:fragment,CC_gene:At1g57790;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012032001~ Putative F-box/kelch-repeat protein At1g57790~ At1g57790~ fragment;original_location=complement(join(441279..441404%2C439750..440361));owner=coffea | |
| 49931 chr10 manual_curation exon 24999777 25000388 . - . Parent=GSCOCT00012032001 | |
| 49932 chr10 manual_curation exon 25001306 25001431 . - . Parent=GSCOCT00012032001 | |
| 49933 chr10 manual_curation CDS 24999777 25000388 . - 0 Parent=GSCOCT00012032001 | |
| 49934 chr10 manual_curation CDS 25001306 25001431 . - 0 Parent=GSCOCT00012032001 | |
| 49935 chr10 manual_curation gene 25045917 25050596 . + . ID=GSCOCG00012035001;Name=Cc10_g14380 | |
| 49936 chr10 manual_curation mRNA 25045917 25050596 . + . ID=GSCOCT00012035001;Parent=GSCOCG00012035001;Name=Cc10_g14380 | |
| 49937 chr10 manual_curation polypeptide 25046048 25049960 . + . ID=GSCOCP00012035001;Dbxref=InterPro:IPR002495,PFAM:PF01501,SwissProt:Q8GWW4,SwissProt:Q8W4A7,SwissProt:Q9LSB1,TAIR:AT1G77130.1,TAIR:AT3G18660.2,TAIR:AT4G33330.2,TrEMBL:B9H7N7,TrEMBL:F6H0A3,TrEMBL:I1JHP2;Derives_from=GSCOCT00012035001;Name=Cc10_g14380;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.4.1.186,PRODUCT:Putative UDP-glucuronate,CC_functional_completeness:complete,CC_gene:GUX3,CC_gene:GUX1,CC_gene:GUX2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012035001~ Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3~ GUX3~ complete;original_location=join(486021..486085%2C487388..487597%2C487839..488476%2C488906..489933);owner=coffea | |
| 49938 chr10 manual_curation exon 25045917 25046112 . + . Parent=GSCOCT00012035001 | |
| 49939 chr10 manual_curation exon 25047415 25047624 . + . Parent=GSCOCT00012035001 | |
| 49940 chr10 manual_curation exon 25047866 25048503 . + . Parent=GSCOCT00012035001 | |
| 49941 chr10 manual_curation exon 25048933 25050596 . + . Parent=GSCOCT00012035001 | |
| 49942 chr10 manual_curation CDS 25046048 25046112 . + 0 Parent=GSCOCT00012035001 | |
| 49943 chr10 manual_curation CDS 25047415 25047624 . + 2 Parent=GSCOCT00012035001 | |
| 49944 chr10 manual_curation CDS 25047866 25048503 . + 2 Parent=GSCOCT00012035001 | |
| 49945 chr10 manual_curation CDS 25048933 25049960 . + 1 Parent=GSCOCT00012035001 | |
| 49946 chr10 manual_curation gene 25059574 25066903 . - . ID=GSCOCG00012037001;Name=Cc10_g14390 | |
| 49947 chr10 manual_curation mRNA 25059574 25066903 . - . ID=GSCOCT00012037001;Parent=GSCOCG00012037001;Name=Cc10_g14390 | |
| 49948 chr10 manual_curation polypeptide 25059574 25066903 . - . ID=GSCOCP00012037001;Dbxref=GENE3D:G3DSA:2.60.40.650,GENE3D:G3DSA:3.10.120.10,GENE3D:G3DSA:3.90.420.10,InterPro:IPR000572,InterPro:IPR001199,InterPro:IPR001433,InterPro:IPR001709,InterPro:IPR001834,InterPro:IPR005066,InterPro:IPR008333,InterPro:IPR008335,InterPro:IPR012137,InterPro:IPR014756,InterPro:IPR017927,InterPro:IPR017938,InterPro:IPR018506,InterPro:IPR022407,PFAM:PF00173,PFAM:PF00174,PFAM:PF00175,PFAM:PF00970,PFAM:PF03404,PIR:PIRSF000233,PRINTS:PR00363,PRINTS:PR00371,PRINTS:PR00406,PRINTS:PR00407,PROFILE:PS50255,PROFILE:PS51384,PROSITE:PS00191,PROSITE:PS00559,SUPERFAMILY:SSF55856,SUPERFAMILY:SSF56524,SUPERFAMILY:SSF63380,SUPERFAMILY:SSF81296,SwissProt:P08509,SwissProt:P11605,SwissProt:P36859,TAIR:AT1G37130.1,TAIR:AT1G77760.1,TAIR:AT3G01910.1,TrEMBL:F6H0M5,TrEMBL:G3G8J8,TrEMBL:Q43042;Derives_from=GSCOCT00012037001;Name=Cc10_g14390;Ontology_term=CC_evidence_code:ISS,GO:0005488,GO:0005506,GO:0009055,GO:0016491,GO:0020037,GO:0030151,GO:0042128,GO:0046872,GO:0050660,GO:0055114,CC_EC_number:1.7.1.1,PRODUCT:Nitrate reductase [NADH],CC_functional_completeness:complete,CC_gene:NIA,CC_gene:NIA2,CC_gene:NIA1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00012037001~ Nitrate reductase [NADH]~ NIA~ complete;original_location=complement(join(505865..506876%2C504707..504847%2C502133..502365%2C499547..500881));owner=coffea | |
| 49949 chr10 manual_curation exon 25059574 25060908 . - . Parent=GSCOCT00012037001 | |
| 49950 chr10 manual_curation exon 25062160 25062392 . - . Parent=GSCOCT00012037001 | |
| 49951 chr10 manual_curation exon 25064734 25064874 . - . Parent=GSCOCT00012037001 | |
| 49952 chr10 manual_curation exon 25065892 25066903 . - . Parent=GSCOCT00012037001 | |
| 49953 chr10 manual_curation CDS 25059574 25060908 . - 0 Parent=GSCOCT00012037001 | |
| 49954 chr10 manual_curation CDS 25062160 25062392 . - 1 Parent=GSCOCT00012037001 | |
| 49955 chr10 manual_curation CDS 25064734 25064874 . - 1 Parent=GSCOCT00012037001 | |
| 49956 chr10 manual_curation CDS 25065892 25066903 . - 0 Parent=GSCOCT00012037001 | |
| 49957 chr10 manual_curation gene 25071162 25073265 . + . ID=GSCOCG00006173001;Name=Cc10_g14400 | |
| 49958 chr10 manual_curation mRNA 25071162 25073265 . + . ID=GSCOCT00006173001;Parent=GSCOCG00006173001;Name=Cc10_g14400 | |
| 49959 chr10 manual_curation polypeptide 25071162 25072868 . + . ID=GSCOCP00006173001;Dbxref=TrEMBL:A5ARN2,TrEMBL:A9PHJ5,TrEMBL:F6GY39;Derives_from=GSCOCT00006173001;Name=Cc10_g14400;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00006173001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(690..815%2C1605..1682%2C2313..2396);owner=coffea | |
| 49960 chr10 manual_curation exon 25071162 25071287 . + . Parent=GSCOCT00006173001 | |
| 49961 chr10 manual_curation exon 25072077 25072154 . + . Parent=GSCOCT00006173001 | |
| 49962 chr10 manual_curation exon 25072785 25073265 . + . Parent=GSCOCT00006173001 | |
| 49963 chr10 manual_curation CDS 25071162 25071287 . + 0 Parent=GSCOCT00006173001 | |
| 49964 chr10 manual_curation CDS 25072077 25072154 . + 0 Parent=GSCOCT00006173001 | |
| 49965 chr10 manual_curation CDS 25072785 25072868 . + 0 Parent=GSCOCT00006173001 | |
| 49966 chr10 manual_curation gene 25085194 25087883 . + . ID=GSCOCG00006174001;Name=Cc10_g14410 | |
| 49967 chr10 manual_curation mRNA 25085194 25087883 . + . ID=GSCOCT00006174001;Parent=GSCOCG00006174001;Name=Cc10_g14410 | |
| 49968 chr10 manual_curation polypeptide 25085717 25086883 . + . ID=GSCOCP00006174001;Dbxref=InterPro:IPR008511,PFAM:PF05633,TAIR:AT1G18740.1,TAIR:AT1G43630.1,TAIR:AT1G74450.1,TrEMBL:B9H7S5,TrEMBL:B9SE68,TrEMBL:F6GY39;Derives_from=GSCOCT00006174001;Name=Cc10_g14410;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF793),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00006174001~ Protein of unknown function (DUF793)~ unknown_gene~ complete;original_location=15245..16411;owner=coffea | |
| 49969 chr10 manual_curation exon 25085194 25087883 . + . Parent=GSCOCT00006174001 | |
| 49970 chr10 manual_curation CDS 25085717 25086883 . + 0 Parent=GSCOCT00006174001 | |
| 49971 chr10 manual_curation gene 25093368 25094760 . + . ID=GSCOCG00006175001;Name=Cc10_g14420 | |
| 49972 chr10 manual_curation mRNA 25093368 25094760 . + . ID=GSCOCT00006175001;Parent=GSCOCG00006175001;Name=Cc10_g14420 | |
| 49973 chr10 manual_curation polypeptide 25093368 25094760 . + . ID=GSCOCP00006175001;Dbxref=InterPro:IPR002068,InterPro:IPR008978,PFAM:PF00011,PROFILE:PS01031,SUPERFAMILY:SSF49764,TAIR:AT1G76780.1,TrEMBL:B9GTI4,TrEMBL:D7SRC8,TrEMBL:G7IBZ6;Derives_from=GSCOCT00006175001;Name=Cc10_g14420;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative 17.6 kDa class I heat shock protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00006175001~ Putative 17.6 kDa class I heat shock protein~ unknown_gene~ modules;original_location=join(22896..23040%2C23231..23626%2C23945..24288);owner=coffea | |
| 49974 chr10 manual_curation exon 25093368 25093512 . + . Parent=GSCOCT00006175001 | |
| 49975 chr10 manual_curation exon 25093703 25094098 . + . Parent=GSCOCT00006175001 | |
| 49976 chr10 manual_curation exon 25094417 25094760 . + . Parent=GSCOCT00006175001 | |
| 49977 chr10 manual_curation CDS 25093368 25093512 . + 0 Parent=GSCOCT00006175001 | |
| 49978 chr10 manual_curation CDS 25093703 25094098 . + 1 Parent=GSCOCT00006175001 | |
| 49979 chr10 manual_curation CDS 25094417 25094760 . + 1 Parent=GSCOCT00006175001 | |
| 49980 chr10 manual_curation gene 25095218 25097958 . - . ID=GSCOCG00006176001;Name=Cc10_g14430 | |
| 49981 chr10 manual_curation mRNA 25095218 25097958 . - . ID=GSCOCT00006176001;Parent=GSCOCG00006176001;Name=Cc10_g14430 | |
| 49982 chr10 manual_curation polypeptide 25095495 25097772 . - . ID=GSCOCP00006176001;Dbxref=GENE3D:G3DSA:2.60.40.420,InterPro:IPR008972,SUPERFAMILY:SSF49503,TAIR:AT1G21090.1,TrEMBL:D7SRC9,TrEMBL:G7IBY5,TrEMBL:I1LDF2;Derives_from=GSCOCT00006176001;Name=Cc10_g14430;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Cupredoxin superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00006176001~ Cupredoxin superfamily protein~ unknown_gene~ complete;original_location=complement(join(27174..27300%2C26924..27039%2C26090..26488%2C25023..25085));owner=coffea | |
| 49983 chr10 manual_curation exon 25095218 25095557 . - . Parent=GSCOCT00006176001 | |
| 49984 chr10 manual_curation exon 25096562 25096960 . - . Parent=GSCOCT00006176001 | |
| 49985 chr10 manual_curation exon 25097396 25097511 . - . Parent=GSCOCT00006176001 | |
| 49986 chr10 manual_curation exon 25097646 25097958 . - . Parent=GSCOCT00006176001 | |
| 49987 chr10 manual_curation CDS 25095495 25095557 . - 0 Parent=GSCOCT00006176001 | |
| 49988 chr10 manual_curation CDS 25096562 25096960 . - 0 Parent=GSCOCT00006176001 | |
| 49989 chr10 manual_curation CDS 25097396 25097511 . - 1 Parent=GSCOCT00006176001 | |
| 49990 chr10 manual_curation CDS 25097646 25097772 . - 0 Parent=GSCOCT00006176001 | |
| 49991 chr10 manual_curation gene 25101334 25107746 . - . ID=GSCOCG00006178001;Name=Cc10_g14440 | |
| 49992 chr10 manual_curation mRNA 25101334 25107746 . - . ID=GSCOCT00006178001;Parent=GSCOCG00006178001;Name=Cc10_g14440 | |
| 49993 chr10 manual_curation polypeptide 25101691 25107117 . - . ID=GSCOCP00006178001;Dbxref=InterPro:IPR004827,InterPro:IPR011616,PFAM:PF00170,PROFILE:PS50217,PROSITE:PS00036,SMART:SM00338,SwissProt:P42777,SwissProt:Q9C5Q2,SwissProt:Q9LES3,TAIR:AT1G03970.1,TAIR:AT3G56850.1,TAIR:AT5G44080.1,TrEMBL:B9H7S8,TrEMBL:F6GY42,TrEMBL:Q8LCQ7;Derives_from=GSCOCT00006178001;Name=Cc10_g14440;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0043565,GO:0046983,CC_EC_number:missing_EC_number,PRODUCT:G-box-binding factor 4,CC_functional_completeness:fragment,CC_gene:GBF4,CC_gene:DPBF3,CC_gene:DPBF4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00006178001~ G-box-binding factor 4~ GBF4~ fragment;original_location=complement(join(36280..36645%2C36096..36167%2C34289..34318%2C31219..31299));owner=coffea | |
| 49994 chr10 manual_curation exon 25101334 25101771 . - . Parent=GSCOCT00006178001 | |
| 49995 chr10 manual_curation exon 25104761 25104790 . - . Parent=GSCOCT00006178001 | |
| 49996 chr10 manual_curation exon 25106568 25106639 . - . Parent=GSCOCT00006178001 | |
| 49997 chr10 manual_curation exon 25106752 25107746 . - . Parent=GSCOCT00006178001 | |
| 49998 chr10 manual_curation CDS 25101691 25101771 . - 0 Parent=GSCOCT00006178001 | |
| 49999 chr10 manual_curation CDS 25104761 25104790 . - 0 Parent=GSCOCT00006178001 | |
| 50000 chr10 manual_curation CDS 25106568 25106639 . - 0 Parent=GSCOCT00006178001 | |
| 50001 chr10 manual_curation CDS 25106752 25107117 . - 0 Parent=GSCOCT00006178001 | |
| 50002 chr10 manual_curation gene 25115703 25127761 . + . ID=GSCOCG00006180001;Name=Cc10_g14450 | |
| 50003 chr10 manual_curation mRNA 25115703 25127761 . + . ID=GSCOCT00006180001;Parent=GSCOCG00006180001;Name=Cc10_g14450 | |
| 50004 chr10 manual_curation polypeptide 25116911 25127512 . + . ID=GSCOCP00006180001;Dbxref=InterPro:IPR002213,InterPro:IPR004276,PFAM:PF00201,PFAM:PF03033,SwissProt:A1CFB3,SwissProt:A1CYS1,SwissProt:Q4WID6,TAIR:AT1G43620.1,TAIR:AT3G07020.2,TAIR:AT5G24750.1,TrEMBL:B9GTH8,TrEMBL:D7SRD3,TrEMBL:Q2I015;Derives_from=GSCOCT00006180001;Name=Cc10_g14450;Ontology_term=CC_evidence_code:ISS,GO:0005975,GO:0008152,GO:0030259,CC_EC_number:2.4.1.173,PRODUCT:UDP-Glycosyltransferase superfamily protein,CC_functional_completeness:complete,CC_gene:atg26;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00006180001~ UDP-Glycosyltransferase superfamily protein~ atg26~ complete;original_location=join(46439..46865%2C47705..47853%2C48148..48399%2C50101..50212%2C50585..50755%2C51428..51491%2C51866..51923%2C52002..52179%2C53454..53584%2C54030..54132%2C54732..54805%2C55093..55140%2C55387..55536%2C56840..57040);owner=coffea | |
| 50005 chr10 manual_curation exon 25115703 25116180 . + . Parent=GSCOCT00006180001 | |
| 50006 chr10 manual_curation exon 25116715 25117337 . + . Parent=GSCOCT00006180001 | |
| 50007 chr10 manual_curation exon 25118177 25118325 . + . Parent=GSCOCT00006180001 | |
| 50008 chr10 manual_curation exon 25118620 25118871 . + . Parent=GSCOCT00006180001 | |
| 50009 chr10 manual_curation exon 25120573 25120684 . + . Parent=GSCOCT00006180001 | |
| 50010 chr10 manual_curation exon 25121057 25121227 . + . Parent=GSCOCT00006180001 | |
| 50011 chr10 manual_curation exon 25121900 25121963 . + . Parent=GSCOCT00006180001 | |
| 50012 chr10 manual_curation exon 25122338 25122395 . + . Parent=GSCOCT00006180001 | |
| 50013 chr10 manual_curation exon 25122474 25122651 . + . Parent=GSCOCT00006180001 | |
| 50014 chr10 manual_curation exon 25123926 25124056 . + . Parent=GSCOCT00006180001 | |
| 50015 chr10 manual_curation exon 25124502 25124604 . + . Parent=GSCOCT00006180001 | |
| 50016 chr10 manual_curation exon 25125204 25125277 . + . Parent=GSCOCT00006180001 | |
| 50017 chr10 manual_curation exon 25125565 25125612 . + . Parent=GSCOCT00006180001 | |
| 50018 chr10 manual_curation exon 25125859 25126008 . + . Parent=GSCOCT00006180001 | |
| 50019 chr10 manual_curation exon 25127312 25127761 . + . Parent=GSCOCT00006180001 | |
| 50020 chr10 manual_curation CDS 25116911 25117337 . + 0 Parent=GSCOCT00006180001 | |
| 50021 chr10 manual_curation CDS 25118177 25118325 . + 1 Parent=GSCOCT00006180001 | |
| 50022 chr10 manual_curation CDS 25118620 25118871 . + 0 Parent=GSCOCT00006180001 | |
| 50023 chr10 manual_curation CDS 25120573 25120684 . + 0 Parent=GSCOCT00006180001 | |
| 50024 chr10 manual_curation CDS 25121057 25121227 . + 1 Parent=GSCOCT00006180001 | |
| 50025 chr10 manual_curation CDS 25121900 25121963 . + 1 Parent=GSCOCT00006180001 | |
| 50026 chr10 manual_curation CDS 25122338 25122395 . + 2 Parent=GSCOCT00006180001 | |
| 50027 chr10 manual_curation CDS 25122474 25122651 . + 0 Parent=GSCOCT00006180001 | |
| 50028 chr10 manual_curation CDS 25123926 25124056 . + 1 Parent=GSCOCT00006180001 | |
| 50029 chr10 manual_curation CDS 25124502 25124604 . + 0 Parent=GSCOCT00006180001 | |
| 50030 chr10 manual_curation CDS 25125204 25125277 . + 1 Parent=GSCOCT00006180001 | |
| 50031 chr10 manual_curation CDS 25125565 25125612 . + 0 Parent=GSCOCT00006180001 | |
| 50032 chr10 manual_curation CDS 25125859 25126008 . + 0 Parent=GSCOCT00006180001 | |
| 50033 chr10 manual_curation CDS 25127312 25127512 . + 0 Parent=GSCOCT00006180001 | |
| 50034 chr10 manual_curation gene 25128030 25129461 . - . ID=GSCOCG00006181001;Name=Cc10_g14460 | |
| 50035 chr10 manual_curation mRNA 25128030 25129461 . - . ID=GSCOCT00006181001;Parent=GSCOCG00006181001;Name=Cc10_g14460 | |
| 50036 chr10 manual_curation polypeptide 25128030 25129461 . - . ID=GSCOCP00006181001;Dbxref=InterPro:IPR008985,InterPro:IPR014895,PFAM:PF08787,SUPERFAMILY:SSF49899,SwissProt:Q39962,TrEMBL:B9H7T0,TrEMBL:F6GY44,TrEMBL:G7KIZ9;Derives_from=GSCOCT00006181001;Name=Cc10_g14460;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Citrate-binding protein,CC_functional_completeness:complete,CC_gene:CBP;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00006181001~ Citrate-binding protein~ CBP~ complete;original_location=complement(join(58738..58989%2C57558..57941));owner=coffea | |
| 50037 chr10 manual_curation exon 25128030 25128413 . - . Parent=GSCOCT00006181001 | |
| 50038 chr10 manual_curation exon 25129210 25129461 . - . Parent=GSCOCT00006181001 | |
| 50039 chr10 manual_curation CDS 25128030 25128413 . - 0 Parent=GSCOCT00006181001 | |
| 50040 chr10 manual_curation CDS 25129210 25129461 . - 0 Parent=GSCOCT00006181001 | |
| 50041 chr10 manual_curation gene 25130910 25132014 . - . ID=GSCOCG00006182001;Name=Cc10_g14470 | |
| 50042 chr10 manual_curation mRNA 25130910 25132014 . - . ID=GSCOCT00006182001;Parent=GSCOCG00006182001;Name=Cc10_g14470 | |
| 50043 chr10 manual_curation polypeptide 25130910 25132014 . - . ID=GSCOCP00006182001;Dbxref=InterPro:IPR008985,InterPro:IPR014895,PFAM:PF08787,SUPERFAMILY:SSF49899,SwissProt:Q39962,TrEMBL:B9GTH7,TrEMBL:B9H7T0,TrEMBL:F6GY44;Derives_from=GSCOCT00006182001;Name=Cc10_g14470;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Citrate-binding protein,CC_functional_completeness:complete,CC_gene:CBP;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00006182001~ Citrate-binding protein~ CBP~ complete;original_location=complement(join(61279..61542%2C60438..60821));owner=coffea | |
| 50044 chr10 manual_curation exon 25130910 25131293 . - . Parent=GSCOCT00006182001 | |
| 50045 chr10 manual_curation exon 25131751 25132014 . - . Parent=GSCOCT00006182001 | |
| 50046 chr10 manual_curation CDS 25130910 25131293 . - 0 Parent=GSCOCT00006182001 | |
| 50047 chr10 manual_curation CDS 25131751 25132014 . - 0 Parent=GSCOCT00006182001 | |
| 50048 chr10 manual_curation gene 25136301 25138160 . - . ID=GSCOCG00006183001;Name=Cc10_g14480 | |
| 50049 chr10 manual_curation mRNA 25136301 25138160 . - . ID=GSCOCT00006183001;Parent=GSCOCG00006183001;Name=Cc10_g14480 | |
| 50050 chr10 manual_curation polypeptide 25136301 25138160 . - . ID=GSCOCP00006183001;Dbxref=InterPro:IPR008985,InterPro:IPR014895,PFAM:PF08787,SUPERFAMILY:SSF49899,SwissProt:Q39962,TrEMBL:B9GTH7,TrEMBL:B9H7T0,TrEMBL:F6GY44;Derives_from=GSCOCT00006183001;Name=Cc10_g14480;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Citrate-binding protein,CC_functional_completeness:complete,CC_gene:CBP;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00006183001~ Citrate-binding protein~ CBP~ complete;original_location=complement(join(67461..67688%2C65829..66221));owner=coffea | |
| 50051 chr10 manual_curation exon 25136301 25136693 . - . Parent=GSCOCT00006183001 | |
| 50052 chr10 manual_curation exon 25137933 25138160 . - . Parent=GSCOCT00006183001 | |
| 50053 chr10 manual_curation CDS 25136301 25136693 . - 0 Parent=GSCOCT00006183001 | |
| 50054 chr10 manual_curation CDS 25137933 25138160 . - 0 Parent=GSCOCT00006183001 | |
| 50055 chr10 manual_curation gene 25139905 25140736 . - . ID=GSCOCG00006184001;Name=Cc10_g14490 | |
| 50056 chr10 manual_curation mRNA 25139905 25140736 . - . ID=GSCOCT00006184001;Parent=GSCOCG00006184001;Name=Cc10_g14490 | |
| 50057 chr10 manual_curation polypeptide 25139905 25140736 . - . ID=GSCOCP00006184001;Dbxref=InterPro:IPR008985,InterPro:IPR014895,PFAM:PF08787,SUPERFAMILY:SSF49899,SwissProt:Q39962,TrEMBL:B9GTH7,TrEMBL:B9H7T0,TrEMBL:F6GY44;Derives_from=GSCOCT00006184001;Name=Cc10_g14490;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Citrate-binding protein,CC_functional_completeness:complete,CC_gene:CBP;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00006184001~ Citrate-binding protein~ CBP~ complete;original_location=complement(join(69989..70264%2C69433..69816));owner=coffea | |
| 50058 chr10 manual_curation exon 25139905 25140288 . - . Parent=GSCOCT00006184001 | |
| 50059 chr10 manual_curation exon 25140461 25140736 . - . Parent=GSCOCT00006184001 | |
| 50060 chr10 manual_curation CDS 25139905 25140288 . - 0 Parent=GSCOCT00006184001 | |
| 50061 chr10 manual_curation CDS 25140461 25140736 . - 0 Parent=GSCOCT00006184001 | |
| 50062 chr10 manual_curation gene 25144999 25145921 . + . ID=GSCOCG00033583001;Name=Cc10_g14500 | |
| 50063 chr10 manual_curation mRNA 25144999 25145921 . + . ID=GSCOCT00033583001;Parent=GSCOCG00033583001;Name=Cc10_g14500 | |
| 50064 chr10 manual_curation polypeptide 25144999 25145193 . + . ID=GSCOCP00033583001;Derives_from=GSCOCT00033583001;Name=Cc10_g14500;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033583001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1..195;owner=coffea | |
| 50065 chr10 manual_curation exon 25144999 25145921 . + . Parent=GSCOCT00033583001 | |
| 50066 chr10 manual_curation CDS 25144999 25145193 . + 0 Parent=GSCOCT00033583001 | |
| 50067 chr10 manual_curation gene 25154506 25155039 . - . ID=GSCOCG00033584001;Name=Cc10_g14510 | |
| 50068 chr10 manual_curation mRNA 25154506 25155039 . - . ID=GSCOCT00033584001;Parent=GSCOCG00033584001;Name=Cc10_g14510 | |
| 50069 chr10 manual_curation polypeptide 25154506 25155039 . - . ID=GSCOCP00033584001;Derives_from=GSCOCT00033584001;Name=Cc10_g14510;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033584001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(9811..10041%2C9508..9777));owner=coffea | |
| 50070 chr10 manual_curation exon 25154506 25154775 . - . Parent=GSCOCT00033584001 | |
| 50071 chr10 manual_curation exon 25154809 25155039 . - . Parent=GSCOCT00033584001 | |
| 50072 chr10 manual_curation CDS 25154506 25154775 . - 0 Parent=GSCOCT00033584001 | |
| 50073 chr10 manual_curation CDS 25154809 25155039 . - 0 Parent=GSCOCT00033584001 | |
| 50074 chr10 manual_curation gene 25182469 25185161 . + . ID=GSCOCG00033588001;Name=Cc10_g14520 | |
| 50075 chr10 manual_curation mRNA 25182469 25185161 . + . ID=GSCOCT00033588001;Parent=GSCOCG00033588001;Name=Cc10_g14520 | |
| 50076 chr10 manual_curation polypeptide 25182469 25184745 . + . ID=GSCOCP00033588001;Dbxref=SwissProt:A1X158,TrEMBL:D8RUV9,TrEMBL:D8SHC9;Derives_from=GSCOCT00033588001;Name=Cc10_g14520;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Foot protein 1 variant 1,CC_functional_completeness:complete,CC_gene:fp-1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033588001~ Putative Foot protein 1 variant 1~ fp-1~ complete;original_location=join(37471..39614%2C39663..39747);owner=coffea | |
| 50077 chr10 manual_curation exon 25185028 25185161 . + . Parent=GSCOCT00033588001 | |
| 50078 chr10 manual_curation exon 25182469 25184612 . + . Parent=GSCOCT00033588001 | |
| 50079 chr10 manual_curation exon 25184661 25184768 . + . Parent=GSCOCT00033588001 | |
| 50080 chr10 manual_curation CDS 25182469 25184612 . + 0 Parent=GSCOCT00033588001 | |
| 50081 chr10 manual_curation CDS 25184661 25184745 . + 2 Parent=GSCOCT00033588001 | |
| 50082 chr10 manual_curation gene 25209931 25211756 . + . ID=GSCOCG00033590001;Name=Cc10_g14530 | |
| 50083 chr10 manual_curation mRNA 25209931 25211756 . + . ID=GSCOCT00033590001;Parent=GSCOCG00033590001;Name=Cc10_g14530 | |
| 50084 chr10 manual_curation polypeptide 25209931 25211475 . + . ID=GSCOCP00033590001;Dbxref=InterPro:IPR006706,PFAM:PF04554,TrEMBL:D8QY50,TrEMBL:D8RUV9;Derives_from=GSCOCT00033590001;Name=Cc10_g14530;Ontology_term=CC_evidence_code:ISS,GO:0005199,GO:0009664,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033590001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=join(64933..65370%2C65954..66177%2C66441..66477);owner=coffea | |
| 50085 chr10 manual_curation exon 25209931 25210368 . + . Parent=GSCOCT00033590001 | |
| 50086 chr10 manual_curation exon 25210952 25211175 . + . Parent=GSCOCT00033590001 | |
| 50087 chr10 manual_curation exon 25211439 25211756 . + . Parent=GSCOCT00033590001 | |
| 50088 chr10 manual_curation CDS 25209931 25210368 . + 0 Parent=GSCOCT00033590001 | |
| 50089 chr10 manual_curation CDS 25210952 25211175 . + 0 Parent=GSCOCT00033590001 | |
| 50090 chr10 manual_curation CDS 25211439 25211475 . + 2 Parent=GSCOCT00033590001 | |
| 50091 chr10 manual_curation gene 25215978 25227404 . - . ID=GSCOCG00033592001;Name=Cc10_g14540 | |
| 50092 chr10 manual_curation mRNA 25215978 25227404 . - . ID=GSCOCT00033592001;Parent=GSCOCG00033592001;Name=Cc10_g14540 | |
| 50093 chr10 manual_curation polypeptide 25216266 25227255 . - . ID=GSCOCP00033592001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR002912,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR015783,InterPro:IPR020635,PANTHER:PTHR23257:SF82,PFAM:PF01842,PFAM:PF07714,PRINTS:PR00109,PROFILE:PS50011,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q2MHE4,SwissProt:Q54H45,SwissProt:Q55GU0,TAIR:AT2G17700.1,TAIR:AT4G35780.1,TAIR:AT4G38470.1,TrEMBL:B9T446,TrEMBL:D7TYD1,TrEMBL:I1NH12;Derives_from=GSCOCT00033592001;Name=Cc10_g14540;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,GO:0008152,GO:0016597,CC_EC_number:2.7.10.2,PRODUCT:ACT-like protein tyrosine kinase family protein,CC_functional_completeness:complete,CC_gene:HT1,CC_gene:DDB_G0267514,CC_gene:drkB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033592001~ ACT-like protein tyrosine kinase family protein~ HT1~ complete;original_location=complement(join(82076..82257%2C81111..81225%2C79997..80109%2C79657..79770%2C78484..78556%2C77362..77472%2C76857..76907%2C76569..76708%2C76337..76444%2C75253..75326%2C74696..74871%2C73061..73156%2C72469..72549%2C72324..72374%2C71380..71523%2C71268..71297));owner=coffea | |
| 50094 chr10 manual_curation exon 25215978 25216295 . - . Parent=GSCOCT00033592001 | |
| 50095 chr10 manual_curation exon 25216378 25216521 . - . Parent=GSCOCT00033592001 | |
| 50096 chr10 manual_curation exon 25217322 25217372 . - . Parent=GSCOCT00033592001 | |
| 50097 chr10 manual_curation exon 25217467 25217547 . - . Parent=GSCOCT00033592001 | |
| 50098 chr10 manual_curation exon 25218059 25218154 . - . Parent=GSCOCT00033592001 | |
| 50099 chr10 manual_curation exon 25219694 25219869 . - . Parent=GSCOCT00033592001 | |
| 50100 chr10 manual_curation exon 25220251 25220324 . - . Parent=GSCOCT00033592001 | |
| 50101 chr10 manual_curation exon 25221335 25221442 . - . Parent=GSCOCT00033592001 | |
| 50102 chr10 manual_curation exon 25221567 25221706 . - . Parent=GSCOCT00033592001 | |
| 50103 chr10 manual_curation exon 25221855 25221905 . - . Parent=GSCOCT00033592001 | |
| 50104 chr10 manual_curation exon 25222360 25222470 . - . Parent=GSCOCT00033592001 | |
| 50105 chr10 manual_curation exon 25223482 25223554 . - . Parent=GSCOCT00033592001 | |
| 50106 chr10 manual_curation exon 25224655 25224768 . - . Parent=GSCOCT00033592001 | |
| 50107 chr10 manual_curation exon 25224995 25225107 . - . Parent=GSCOCT00033592001 | |
| 50108 chr10 manual_curation exon 25226109 25226223 . - . Parent=GSCOCT00033592001 | |
| 50109 chr10 manual_curation exon 25227074 25227404 . - . Parent=GSCOCT00033592001 | |
| 50110 chr10 manual_curation CDS 25216266 25216295 . - 0 Parent=GSCOCT00033592001 | |
| 50111 chr10 manual_curation CDS 25216378 25216521 . - 0 Parent=GSCOCT00033592001 | |
| 50112 chr10 manual_curation CDS 25217322 25217372 . - 0 Parent=GSCOCT00033592001 | |
| 50113 chr10 manual_curation CDS 25217467 25217547 . - 0 Parent=GSCOCT00033592001 | |
| 50114 chr10 manual_curation CDS 25218059 25218154 . - 0 Parent=GSCOCT00033592001 | |
| 50115 chr10 manual_curation CDS 25219694 25219869 . - 1 Parent=GSCOCT00033592001 | |
| 50116 chr10 manual_curation CDS 25220251 25220324 . - 2 Parent=GSCOCT00033592001 | |
| 50117 chr10 manual_curation CDS 25221335 25221442 . - 2 Parent=GSCOCT00033592001 | |
| 50118 chr10 manual_curation CDS 25221567 25221706 . - 0 Parent=GSCOCT00033592001 | |
| 50119 chr10 manual_curation CDS 25221855 25221905 . - 0 Parent=GSCOCT00033592001 | |
| 50120 chr10 manual_curation CDS 25222360 25222470 . - 0 Parent=GSCOCT00033592001 | |
| 50121 chr10 manual_curation CDS 25223482 25223554 . - 2 Parent=GSCOCT00033592001 | |
| 50122 chr10 manual_curation CDS 25224655 25224768 . - 2 Parent=GSCOCT00033592001 | |
| 50123 chr10 manual_curation CDS 25224995 25225107 . - 0 Parent=GSCOCT00033592001 | |
| 50124 chr10 manual_curation CDS 25226109 25226223 . - 2 Parent=GSCOCT00033592001 | |
| 50125 chr10 manual_curation CDS 25227074 25227255 . - 0 Parent=GSCOCT00033592001 | |
| 50126 chr10 manual_curation gene 25254472 25255852 . - . ID=GSCOCG00033594001;Name=Cc10_g14550 | |
| 50127 chr10 manual_curation mRNA 25254472 25255852 . - . ID=GSCOCT00033594001;Parent=GSCOCG00033594001;Name=Cc10_g14550 | |
| 50128 chr10 manual_curation polypeptide 25254472 25255611 . - . ID=GSCOCP00033594001;Dbxref=InterPro:IPR001810,InterPro:IPR022364,PFAM:PF00646,PROFILE:PS50181,SMART:SM00256,SUPERFAMILY:SSF81383,SwissProt:O49279,TAIR:AT1G76920.1,TrEMBL:B9GTK5,TrEMBL:B9H7Q7,TrEMBL:F6GYV4;Derives_from=GSCOCT00033594001;Name=Cc10_g14550;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:SKP1-interacting partner 15,CC_functional_completeness:complete,CC_gene:SKIP15;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033594001~ SKP1-interacting partner 15~ SKIP15~ complete;original_location=complement(109474..110613);owner=coffea | |
| 50129 chr10 manual_curation exon 25254472 25255852 . - . Parent=GSCOCT00033594001 | |
| 50130 chr10 manual_curation CDS 25254472 25255611 . - 0 Parent=GSCOCT00033594001 | |
| 50131 chr10 manual_curation gene 25265663 25270142 . + . ID=GSCOCG00033595001;Name=Cc10_g14560 | |
| 50132 chr10 manual_curation mRNA 25265663 25270142 . + . ID=GSCOCT00033595001;Parent=GSCOCG00033595001;Name=Cc10_g14560 | |
| 50133 chr10 manual_curation polypeptide 25266165 25269782 . + . ID=GSCOCP00033595001;Dbxref=GENE3D:G3DSA:3.40.640.10,InterPro:IPR002129,InterPro:IPR015421,InterPro:IPR015424,InterPro:IPR021115,PANTHER:PTHR11999,PFAM:PF00282,PROSITE:PS00392,SUPERFAMILY:SSF53383,SwissProt:A7MVI6,SwissProt:P54772,SwissProt:Q1IAK7,TAIR:AT1G43710.1,TrEMBL:B9H7Q8,TrEMBL:B9T448,TrEMBL:Q4H1G0,TrEMBL:Q9MA74,TrEMBL:Q9SXL2;Derives_from=GSCOCT00033595001;Name=Cc10_g14560;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0016831,GO:0019752,GO:0030170,CC_EC_number:4.1.1.22,PRODUCT:Histidine decarboxylase,CC_functional_completeness:complete,CC_gene:HDC,CC_gene:hdc;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033595001~ Histidine decarboxylase~ HDC~ complete;original_location=join(121167..121227%2C122282..122513%2C122614..122807%2C122981..123117%2C124218..124784);owner=coffea | |
| 50134 chr10 manual_curation exon 25265663 25266225 . + . Parent=GSCOCT00033595001 | |
| 50135 chr10 manual_curation exon 25267280 25267511 . + . Parent=GSCOCT00033595001 | |
| 50136 chr10 manual_curation exon 25267612 25267805 . + . Parent=GSCOCT00033595001 | |
| 50137 chr10 manual_curation exon 25267979 25268115 . + . Parent=GSCOCT00033595001 | |
| 50138 chr10 manual_curation exon 25269216 25270142 . + . Parent=GSCOCT00033595001 | |
| 50139 chr10 manual_curation CDS 25266165 25266225 . + 0 Parent=GSCOCT00033595001 | |
| 50140 chr10 manual_curation CDS 25267280 25267511 . + 1 Parent=GSCOCT00033595001 | |
| 50141 chr10 manual_curation CDS 25267612 25267805 . + 2 Parent=GSCOCT00033595001 | |
| 50142 chr10 manual_curation CDS 25267979 25268115 . + 1 Parent=GSCOCT00033595001 | |
| 50143 chr10 manual_curation CDS 25269216 25269782 . + 0 Parent=GSCOCT00033595001 | |
| 50144 chr10 manual_curation gene 25270751 25273169 . - . ID=GSCOCG00033596001;Name=Cc10_g14570 | |
| 50145 chr10 manual_curation mRNA 25270751 25273169 . - . ID=GSCOCT00033596001;Parent=GSCOCG00033596001;Name=Cc10_g14570 | |
| 50146 chr10 manual_curation polypeptide 25270751 25273169 . - . ID=GSCOCP00033596001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:Q05JG2,SwissProt:Q949P1,SwissProt:Q9FH76,TAIR:AT1G19630.1,TAIR:AT4G19230.2,TAIR:AT5G45340.1,TrEMBL:B9GTK3,TrEMBL:B9T450,TrEMBL:C6THL2;Derives_from=GSCOCT00033596001;Name=Cc10_g14570;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.79,PRODUCT:Putative Abscisic acid 8'-hydroxylase 3,CC_functional_completeness:complete,CC_gene:CYP707A3,CC_gene:CYP707A1,CC_gene:CYP707A5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033596001~ Putative Abscisic acid 8'-hydroxylase 3~ CYP707A3~ complete;original_location=complement(join(127963..128171%2C127511..127829%2C127272..127424%2C126898..127164%2C126741..126818%2C126573..126651%2C126372..126478%2C126172..126290%2C125753..125843));owner=coffea | |
| 50147 chr10 manual_curation exon 25270751 25270841 . - . Parent=GSCOCT00033596001 | |
| 50148 chr10 manual_curation exon 25271170 25271288 . - . Parent=GSCOCT00033596001 | |
| 50149 chr10 manual_curation exon 25271370 25271476 . - . Parent=GSCOCT00033596001 | |
| 50150 chr10 manual_curation exon 25271571 25271649 . - . Parent=GSCOCT00033596001 | |
| 50151 chr10 manual_curation exon 25271739 25271816 . - . Parent=GSCOCT00033596001 | |
| 50152 chr10 manual_curation exon 25271896 25272162 . - . Parent=GSCOCT00033596001 | |
| 50153 chr10 manual_curation exon 25272270 25272422 . - . Parent=GSCOCT00033596001 | |
| 50154 chr10 manual_curation exon 25272509 25272827 . - . Parent=GSCOCT00033596001 | |
| 50155 chr10 manual_curation exon 25272961 25273169 . - . Parent=GSCOCT00033596001 | |
| 50156 chr10 manual_curation CDS 25270751 25270841 . - 2 Parent=GSCOCT00033596001 | |
| 50157 chr10 manual_curation CDS 25271170 25271288 . - 0 Parent=GSCOCT00033596001 | |
| 50158 chr10 manual_curation CDS 25271370 25271476 . - 1 Parent=GSCOCT00033596001 | |
| 50159 chr10 manual_curation CDS 25271571 25271649 . - 0 Parent=GSCOCT00033596001 | |
| 50160 chr10 manual_curation CDS 25271739 25271816 . - 0 Parent=GSCOCT00033596001 | |
| 50161 chr10 manual_curation CDS 25271896 25272162 . - 0 Parent=GSCOCT00033596001 | |
| 50162 chr10 manual_curation CDS 25272270 25272422 . - 0 Parent=GSCOCT00033596001 | |
| 50163 chr10 manual_curation CDS 25272509 25272827 . - 2 Parent=GSCOCT00033596001 | |
| 50164 chr10 manual_curation CDS 25272961 25273169 . - 0 Parent=GSCOCT00033596001 | |
| 50165 chr10 manual_curation gene 25274538 25283955 . - . ID=GSCOCG00033597001;Name=Cc10_g14580 | |
| 50166 chr10 manual_curation mRNA 25274538 25283955 . - . ID=GSCOCT00033597001;Parent=GSCOCG00033597001;Name=Cc10_g14580 | |
| 50167 chr10 manual_curation polypeptide 25274841 25281432 . - . ID=GSCOCP00033597001;Dbxref=InterPro:IPR001841,InterPro:IPR002035,InterPro:IPR010734,PFAM:PF07002,PROFILE:PS50089,SMART:SM00184,SMART:SM00327,SwissProt:Q09221,SwissProt:Q9LY87,SwissProt:Q9SS90,TAIR:AT1G67800.2,TAIR:AT1G79380.1,TAIR:AT5G14420.1,TrEMBL:B9HI27,TrEMBL:B9HYC3,TrEMBL:I1KTV7;Derives_from=GSCOCT00033597001;Name=Cc10_g14580;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:E3 ubiquitin-protein ligase RGLG2,CC_functional_completeness:modules,CC_gene:RGLG2,CC_gene:RGLG1,CC_gene:cpna-2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033597001~ E3 ubiquitin-protein ligase RGLG2~ RGLG2~ modules;original_location=complement(join(136081..136434%2C134063..134147%2C133271..133411%2C133062..133175%2C132819..132916%2C132651..132730%2C131263..131368%2C131045..131172%2C130416..130542%2C130008..130064%2C129843..129926));owner=coffea | |
| 50168 chr10 manual_curation exon 25281580 25281789 . - . Parent=GSCOCT00033597001 | |
| 50169 chr10 manual_curation exon 25283817 25283955 . - . Parent=GSCOCT00033597001 | |
| 50170 chr10 manual_curation exon 25274538 25274924 . - . Parent=GSCOCT00033597001 | |
| 50171 chr10 manual_curation exon 25275006 25275062 . - . Parent=GSCOCT00033597001 | |
| 50172 chr10 manual_curation exon 25275414 25275540 . - . Parent=GSCOCT00033597001 | |
| 50173 chr10 manual_curation exon 25276043 25276170 . - . Parent=GSCOCT00033597001 | |
| 50174 chr10 manual_curation exon 25276261 25276366 . - . Parent=GSCOCT00033597001 | |
| 50175 chr10 manual_curation exon 25277649 25277728 . - . Parent=GSCOCT00033597001 | |
| 50176 chr10 manual_curation exon 25277817 25277914 . - . Parent=GSCOCT00033597001 | |
| 50177 chr10 manual_curation exon 25278060 25278173 . - . Parent=GSCOCT00033597001 | |
| 50178 chr10 manual_curation exon 25278269 25278409 . - . Parent=GSCOCT00033597001 | |
| 50179 chr10 manual_curation exon 25279061 25279145 . - . Parent=GSCOCT00033597001 | |
| 50180 chr10 manual_curation exon 25281079 25281485 . - . Parent=GSCOCT00033597001 | |
| 50181 chr10 manual_curation CDS 25274841 25274924 . - 0 Parent=GSCOCT00033597001 | |
| 50182 chr10 manual_curation CDS 25275006 25275062 . - 0 Parent=GSCOCT00033597001 | |
| 50183 chr10 manual_curation CDS 25275414 25275540 . - 2 Parent=GSCOCT00033597001 | |
| 50184 chr10 manual_curation CDS 25276043 25276170 . - 0 Parent=GSCOCT00033597001 | |
| 50185 chr10 manual_curation CDS 25276261 25276366 . - 2 Parent=GSCOCT00033597001 | |
| 50186 chr10 manual_curation CDS 25277649 25277728 . - 0 Parent=GSCOCT00033597001 | |
| 50187 chr10 manual_curation CDS 25277817 25277914 . - 1 Parent=GSCOCT00033597001 | |
| 50188 chr10 manual_curation CDS 25278060 25278173 . - 1 Parent=GSCOCT00033597001 | |
| 50189 chr10 manual_curation CDS 25278269 25278409 . - 1 Parent=GSCOCT00033597001 | |
| 50190 chr10 manual_curation CDS 25279061 25279145 . - 0 Parent=GSCOCT00033597001 | |
| 50191 chr10 manual_curation CDS 25281079 25281432 . - 0 Parent=GSCOCT00033597001 | |
| 50192 chr10 manual_curation gene 25357704 25358450 . + . ID=GSCOCG00033600001;Name=Cc10_g14590 | |
| 50193 chr10 manual_curation mRNA 25357704 25358450 . + . ID=GSCOCT00033600001;Parent=GSCOCG00033600001;Name=Cc10_g14590 | |
| 50194 chr10 manual_curation polypeptide 25357779 25358450 . + . ID=GSCOCP00033600001;Dbxref=InterPro:IPR008217,PFAM:PF01988,SwissProt:Q9LPU9,SwissProt:Q9M2C0,SwissProt:Q9M2C3,TAIR:AT1G21140.1,TAIR:AT3G43630.1,TAIR:AT3G43660.1,TrEMBL:B9GTK1,TrEMBL:B9H7R1,TrEMBL:B9SWZ1;Derives_from=GSCOCT00033600001;Name=Cc10_g14590;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Vacuolar iron transporter homolog 4,CC_functional_completeness:complete,CC_gene:At3g43660,CC_gene:At1g21140,CC_gene:At3g43630;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033600001~ Vacuolar iron transporter homolog 4~ At3g43660~ complete;original_location=212781..213452;owner=coffea | |
| 50195 chr10 manual_curation exon 25357704 25358450 . + . Parent=GSCOCT00033600001 | |
| 50196 chr10 manual_curation CDS 25357779 25358450 . + 0 Parent=GSCOCT00033600001 | |
| 50197 chr10 manual_curation gene 25361876 25373939 . - . ID=GSCOCG00033601001;Name=Cc10_g14600 | |
| 50198 chr10 manual_curation mRNA 25361876 25373939 . - . ID=GSCOCT00033601001;Parent=GSCOCG00033601001;Name=Cc10_g14600 | |
| 50199 chr10 manual_curation polypeptide 25362308 25373939 . - . ID=GSCOCP00033601001;Dbxref=InterPro:IPR000795,InterPro:IPR004161,InterPro:IPR005225,InterPro:IPR009000,InterPro:IPR015760,PANTHER:PTHR23115:SF41,PFAM:PF00009,PFAM:PF03144,PRINTS:PR00315,SUPERFAMILY:SSF50447,SwissProt:O60841,SwissProt:Q05D44,SwissProt:Q10251,TAIR:AT1G76720.1,TAIR:AT1G76810.1,TAIR:AT1G76820.1,TIGRFAMs:TIGR00231,TrEMBL:F6GYV0,TrEMBL:I1LDH2,TrEMBL:I1NH15;Derives_from=GSCOCT00033601001;Name=Cc10_g14600;Ontology_term=CC_evidence_code:ISS,GO:0003924,GO:0005525,CC_EC_number:missing_EC_number,PRODUCT:eukaryotic translation initiation factor 2 (eIF-2) family protein,CC_functional_completeness:complete,CC_gene:SPAC56F8.03,CC_gene:Eif5b,CC_gene:EIF5B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033601001~ eukaryotic translation initiation factor 2 (eIF-2) family protein~ SPAC56F8.03~ complete;original_location=complement(join(228575..228941%2C228197..228370%2C227480..228040%2C223948..225461%2C223764..223864%2C223554..223644%2C223227..223337%2C223085..223150%2C221018..221077%2C220024..220581%2C219237..219356%2C217498..217617%2C217310..217375));owner=coffea | |
| 50200 chr10 manual_curation exon 25361876 25362373 . - . Parent=GSCOCT00033601001 | |
| 50201 chr10 manual_curation exon 25362496 25362615 . - . Parent=GSCOCT00033601001 | |
| 50202 chr10 manual_curation exon 25364235 25364354 . - . Parent=GSCOCT00033601001 | |
| 50203 chr10 manual_curation exon 25365022 25365579 . - . Parent=GSCOCT00033601001 | |
| 50204 chr10 manual_curation exon 25366016 25366075 . - . Parent=GSCOCT00033601001 | |
| 50205 chr10 manual_curation exon 25368083 25368148 . - . Parent=GSCOCT00033601001 | |
| 50206 chr10 manual_curation exon 25368225 25368335 . - . Parent=GSCOCT00033601001 | |
| 50207 chr10 manual_curation exon 25368552 25368642 . - . Parent=GSCOCT00033601001 | |
| 50208 chr10 manual_curation exon 25368762 25368862 . - . Parent=GSCOCT00033601001 | |
| 50209 chr10 manual_curation exon 25368946 25370459 . - . Parent=GSCOCT00033601001 | |
| 50210 chr10 manual_curation exon 25372478 25373038 . - . Parent=GSCOCT00033601001 | |
| 50211 chr10 manual_curation exon 25373195 25373368 . - . Parent=GSCOCT00033601001 | |
| 50212 chr10 manual_curation exon 25373573 25373939 . - . Parent=GSCOCT00033601001 | |
| 50213 chr10 manual_curation CDS 25362308 25362373 . - 0 Parent=GSCOCT00033601001 | |
| 50214 chr10 manual_curation CDS 25362496 25362615 . - 0 Parent=GSCOCT00033601001 | |
| 50215 chr10 manual_curation CDS 25364235 25364354 . - 0 Parent=GSCOCT00033601001 | |
| 50216 chr10 manual_curation CDS 25365022 25365579 . - 0 Parent=GSCOCT00033601001 | |
| 50217 chr10 manual_curation CDS 25366016 25366075 . - 0 Parent=GSCOCT00033601001 | |
| 50218 chr10 manual_curation CDS 25368083 25368148 . - 0 Parent=GSCOCT00033601001 | |
| 50219 chr10 manual_curation CDS 25368225 25368335 . - 0 Parent=GSCOCT00033601001 | |
| 50220 chr10 manual_curation CDS 25368552 25368642 . - 2 Parent=GSCOCT00033601001 | |
| 50221 chr10 manual_curation CDS 25368762 25368862 . - 0 Parent=GSCOCT00033601001 | |
| 50222 chr10 manual_curation CDS 25368946 25370459 . - 1 Parent=GSCOCT00033601001 | |
| 50223 chr10 manual_curation CDS 25372478 25373038 . - 1 Parent=GSCOCT00033601001 | |
| 50224 chr10 manual_curation CDS 25373195 25373368 . - 1 Parent=GSCOCT00033601001 | |
| 50225 chr10 manual_curation CDS 25373573 25373939 . - 0 Parent=GSCOCT00033601001 | |
| 50226 chr10 manual_curation gene 25374009 25374520 . - . ID=GSCOCG00033602001;Name=Cc10_g14610 | |
| 50227 chr10 manual_curation mRNA 25374009 25374520 . - . ID=GSCOCT00033602001;Parent=GSCOCG00033602001;Name=Cc10_g14610 | |
| 50228 chr10 manual_curation polypeptide 25374009 25374520 . - . ID=GSCOCP00033602001;Derives_from=GSCOCT00033602001;Name=Cc10_g14610;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033602001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(229263..229522%2C229011..229032));owner=coffea | |
| 50229 chr10 manual_curation exon 25374009 25374030 . - . Parent=GSCOCT00033602001 | |
| 50230 chr10 manual_curation exon 25374261 25374520 . - . Parent=GSCOCT00033602001 | |
| 50231 chr10 manual_curation CDS 25374009 25374030 . - 2 Parent=GSCOCT00033602001 | |
| 50232 chr10 manual_curation CDS 25374261 25374520 . - 0 Parent=GSCOCT00033602001 | |
| 50233 chr10 manual_curation gene 25377383 25381824 . - . ID=GSCOCG00033603001;Name=Cc10_g14620 | |
| 50234 chr10 manual_curation mRNA 25377383 25381824 . - . ID=GSCOCT00033603001;Parent=GSCOCG00033603001;Name=Cc10_g14620 | |
| 50235 chr10 manual_curation polypeptide 25377424 25379412 . - . ID=GSCOCP00033603001;Dbxref=InterPro:IPR001611,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SwissProt:Q6R2J8,SwissProt:Q9C8M9,SwissProt:Q9LUL4,TAIR:AT1G53730.2,TAIR:AT3G14350.1,TAIR:AT4G22130.1,TrEMBL:A4GWX5,TrEMBL:C5X2E6,TrEMBL:D7TZI8;Derives_from=GSCOCT00033603001;Name=Cc10_g14620;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein STRUBBELIG-RECEPTOR FAMILY 7,CC_functional_completeness:fragment,CC_gene:SRF7,CC_gene:SRF6,CC_gene:SRF8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033603001~ Putative Protein STRUBBELIG-RECEPTOR FAMILY 7~ SRF7~ fragment;original_location=complement(join(234288..234414%2C233908..234040%2C233702..233773%2C233542..233613%2C233363..233434%2C233220..233285%2C233068..233130%2C232774..232973%2C232426..232526));owner=coffea | |
| 50236 chr10 manual_curation exon 25381375 25381434 . - . Parent=GSCOCT00033603001 | |
| 50237 chr10 manual_curation exon 25381658 25381824 . - . Parent=GSCOCT00033603001 | |
| 50238 chr10 manual_curation exon 25377383 25377524 . - . Parent=GSCOCT00033603001 | |
| 50239 chr10 manual_curation exon 25377772 25377971 . - . Parent=GSCOCT00033603001 | |
| 50240 chr10 manual_curation exon 25378066 25378128 . - . Parent=GSCOCT00033603001 | |
| 50241 chr10 manual_curation exon 25378218 25378283 . - . Parent=GSCOCT00033603001 | |
| 50242 chr10 manual_curation exon 25378361 25378432 . - . Parent=GSCOCT00033603001 | |
| 50243 chr10 manual_curation exon 25378540 25378611 . - . Parent=GSCOCT00033603001 | |
| 50244 chr10 manual_curation exon 25378700 25378771 . - . Parent=GSCOCT00033603001 | |
| 50245 chr10 manual_curation exon 25378906 25379038 . - . Parent=GSCOCT00033603001 | |
| 50246 chr10 manual_curation exon 25379286 25379493 . - . Parent=GSCOCT00033603001 | |
| 50247 chr10 manual_curation CDS 25377424 25377524 . - 1 Parent=GSCOCT00033603001 | |
| 50248 chr10 manual_curation CDS 25377772 25377971 . - 2 Parent=GSCOCT00033603001 | |
| 50249 chr10 manual_curation CDS 25378066 25378128 . - 2 Parent=GSCOCT00033603001 | |
| 50250 chr10 manual_curation CDS 25378218 25378283 . - 2 Parent=GSCOCT00033603001 | |
| 50251 chr10 manual_curation CDS 25378361 25378432 . - 2 Parent=GSCOCT00033603001 | |
| 50252 chr10 manual_curation CDS 25378540 25378611 . - 2 Parent=GSCOCT00033603001 | |
| 50253 chr10 manual_curation CDS 25378700 25378771 . - 2 Parent=GSCOCT00033603001 | |
| 50254 chr10 manual_curation CDS 25378906 25379038 . - 1 Parent=GSCOCT00033603001 | |
| 50255 chr10 manual_curation CDS 25379286 25379412 . - 0 Parent=GSCOCT00033603001 | |
| 50256 chr10 manual_curation gene 25386358 25388170 . + . ID=GSCOCG00033604001;Name=Cc10_g14630 | |
| 50257 chr10 manual_curation mRNA 25386358 25388170 . + . ID=GSCOCT00033604001;Parent=GSCOCG00033604001;Name=Cc10_g14630 | |
| 50258 chr10 manual_curation polypeptide 25386358 25388170 . + . ID=GSCOCP00033604001;Dbxref=InterPro:IPR004314,PFAM:PF03080,TAIR:AT2G44210.2,TAIR:AT5G18460.1,TAIR:AT5G56530.1,TrEMBL:A5BG28,TrEMBL:D7M079,TrEMBL:D7M095;Derives_from=GSCOCT00033604001;Name=Cc10_g14630;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of Unknown Function (DUF239),CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033604001~ Putative Protein of Unknown Function (DUF239)~ unknown_gene~ fragment;original_location=join(241360..241575%2C241989..242147%2C242242..242295%2C242409..242565%2C243069..243172);owner=coffea | |
| 50259 chr10 manual_curation exon 25386358 25386573 . + . Parent=GSCOCT00033604001 | |
| 50260 chr10 manual_curation exon 25386987 25387145 . + . Parent=GSCOCT00033604001 | |
| 50261 chr10 manual_curation exon 25387240 25387293 . + . Parent=GSCOCT00033604001 | |
| 50262 chr10 manual_curation exon 25387407 25387563 . + . Parent=GSCOCT00033604001 | |
| 50263 chr10 manual_curation exon 25388067 25388170 . + . Parent=GSCOCT00033604001 | |
| 50264 chr10 manual_curation CDS 25386358 25386573 . + 0 Parent=GSCOCT00033604001 | |
| 50265 chr10 manual_curation CDS 25386987 25387145 . + 0 Parent=GSCOCT00033604001 | |
| 50266 chr10 manual_curation CDS 25387240 25387293 . + 0 Parent=GSCOCT00033604001 | |
| 50267 chr10 manual_curation CDS 25387407 25387563 . + 0 Parent=GSCOCT00033604001 | |
| 50268 chr10 manual_curation CDS 25388067 25388170 . + 1 Parent=GSCOCT00033604001 | |
| 50269 chr10 manual_curation gene 25414206 25415395 . - . ID=GSCOCG00033608001;Name=Cc10_g14640 | |
| 50270 chr10 manual_curation mRNA 25414206 25415395 . - . ID=GSCOCT00033608001;Parent=GSCOCG00033608001;Name=Cc10_g14640 | |
| 50271 chr10 manual_curation polypeptide 25414254 25415395 . - . ID=GSCOCP00033608001;Derives_from=GSCOCT00033608001;Name=Cc10_g14640;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033608001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(270368..270397%2C269256..269363));owner=coffea | |
| 50272 chr10 manual_curation exon 25414206 25414361 . - . Parent=GSCOCT00033608001 | |
| 50273 chr10 manual_curation exon 25415366 25415395 . - . Parent=GSCOCT00033608001 | |
| 50274 chr10 manual_curation CDS 25414254 25414361 . - 0 Parent=GSCOCT00033608001 | |
| 50275 chr10 manual_curation CDS 25415366 25415395 . - 0 Parent=GSCOCT00033608001 | |
| 50276 chr10 manual_curation gene 25480798 25481411 . + . ID=GSCOCG00033609001;Name=Cc10_g14650 | |
| 50277 chr10 manual_curation mRNA 25480798 25481411 . + . ID=GSCOCT00033609001;Parent=GSCOCG00033609001;Name=Cc10_g14650 | |
| 50278 chr10 manual_curation polypeptide 25480866 25481209 . + . ID=GSCOCP00033609001;Derives_from=GSCOCT00033609001;Name=Cc10_g14650;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033609001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(335868..335879%2C336041..336211);owner=coffea | |
| 50279 chr10 manual_curation exon 25480798 25480877 . + . Parent=GSCOCT00033609001 | |
| 50280 chr10 manual_curation exon 25481039 25481411 . + . Parent=GSCOCT00033609001 | |
| 50281 chr10 manual_curation CDS 25480866 25480877 . + 0 Parent=GSCOCT00033609001 | |
| 50282 chr10 manual_curation CDS 25481039 25481209 . + 0 Parent=GSCOCT00033609001 | |
| 50283 chr10 manual_curation gene 25483835 25485934 . + . ID=GSCOCG00033611001;Name=Cc10_g14660 | |
| 50284 chr10 manual_curation mRNA 25483835 25485934 . + . ID=GSCOCT00033611001;Parent=GSCOCG00033611001;Name=Cc10_g14660 | |
| 50285 chr10 manual_curation polypeptide 25484999 25485367 . + . ID=GSCOCP00033611001;Derives_from=GSCOCT00033611001;Name=Cc10_g14660;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033611001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=340001..340369;owner=coffea | |
| 50286 chr10 manual_curation exon 25483835 25485934 . + . Parent=GSCOCT00033611001 | |
| 50287 chr10 manual_curation CDS 25484999 25485367 . + 0 Parent=GSCOCT00033611001 | |
| 50288 chr10 manual_curation gene 25487186 25488855 . - . ID=GSCOCG00033612001;Name=Cc10_g14670 | |
| 50289 chr10 manual_curation mRNA 25487186 25488855 . - . ID=GSCOCT00033612001;Parent=GSCOCG00033612001;Name=Cc10_g14670 | |
| 50290 chr10 manual_curation polypeptide 25487186 25488855 . - . ID=GSCOCP00033612001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:Q50EK0,SwissProt:Q50EK1,SwissProt:Q8W4T9,TAIR:AT2G42850.1,TAIR:AT3G19270.1,TAIR:AT5G36110.1,TrEMBL:F4YF71,TrEMBL:H2DH15,TrEMBL:H2DH16;Derives_from=GSCOCT00033612001;Name=Cc10_g14670;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.76,PRODUCT:Putative Cytochrome P450 716B1,CC_functional_completeness:complete,CC_gene:CYP716B1,CC_gene:CYP716B2,CC_gene:CYP725A2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033612001~ Putative Cytochrome P450 716B1~ CYP716B1~ complete;original_location=complement(join(343784..343857%2C343328..343722%2C342881..343162%2C342577..342764%2C342188..342481));owner=coffea | |
| 50291 chr10 manual_curation exon 25487186 25487479 . - . Parent=GSCOCT00033612001 | |
| 50292 chr10 manual_curation exon 25487575 25487762 . - . Parent=GSCOCT00033612001 | |
| 50293 chr10 manual_curation exon 25487879 25488160 . - . Parent=GSCOCT00033612001 | |
| 50294 chr10 manual_curation exon 25488326 25488720 . - . Parent=GSCOCT00033612001 | |
| 50295 chr10 manual_curation exon 25488782 25488855 . - . Parent=GSCOCT00033612001 | |
| 50296 chr10 manual_curation CDS 25487186 25487479 . - 0 Parent=GSCOCT00033612001 | |
| 50297 chr10 manual_curation CDS 25487575 25487762 . - 1 Parent=GSCOCT00033612001 | |
| 50298 chr10 manual_curation CDS 25487879 25488160 . - 1 Parent=GSCOCT00033612001 | |
| 50299 chr10 manual_curation CDS 25488326 25488720 . - 2 Parent=GSCOCT00033612001 | |
| 50300 chr10 manual_curation CDS 25488782 25488855 . - 0 Parent=GSCOCT00033612001 | |
| 50301 chr10 manual_curation gene 25493107 25500514 . + . ID=GSCOCG00033613001;Name=Cc10_g14680 | |
| 50302 chr10 manual_curation mRNA 25493107 25500514 . + . ID=GSCOCT00033613001;Parent=GSCOCG00033613001;Name=Cc10_g14680 | |
| 50303 chr10 manual_curation polypeptide 25493107 25500004 . + . ID=GSCOCP00033613001;Dbxref=InterPro:IPR001650,InterPro:IPR002464,InterPro:IPR007502,InterPro:IPR011545,InterPro:IPR011709,InterPro:IPR014001,InterPro:IPR014021,PFAM:PF00270,PFAM:PF00271,PFAM:PF04408,PFAM:PF07717,PROFILE:PS51192,PROFILE:PS51194,PROSITE:PS00690,SMART:SM00487,SMART:SM00490,SMART:SM00847,SwissProt:Q38953,SwissProt:Q54F05,SwissProt:Q767K6,TAIR:AT1G27900.1,TAIR:AT1G32490.1,TAIR:AT3G26560.1,TrEMBL:B9HTA3,TrEMBL:B9RMI9,TrEMBL:Q93Y16;Derives_from=GSCOCT00033613001;Name=Cc10_g14680;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0004386,GO:0005524,GO:0008026,CC_EC_number:3.6.1.15,PRODUCT:Putative Probable pre-mRNA-splicing factor ATP-dependent RNA helicase,CC_functional_completeness:fragment,CC_gene:At3g26560,CC_gene:dhx8,CC_gene:DHX16;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033613001~ Putative Probable pre-mRNA-splicing factor ATP-dependent RNA helicase~ At3g26560~ fragment;original_location=join(348109..348308%2C348906..348998%2C349094..349198%2C349345..349562%2C349722..349774%2C349943..350063%2C350260..350377%2C351142..351228%2C351614..351828%2C351913..352005%2C352293..352416%2C353045..353192%2C353811..353880%2C354133..354293%2C354568..354743%2C354856..355006);owner=coffea | |
| 50304 chr10 manual_curation exon 25493107 25493306 . + . Parent=GSCOCT00033613001 | |
| 50305 chr10 manual_curation exon 25493904 25493996 . + . Parent=GSCOCT00033613001 | |
| 50306 chr10 manual_curation exon 25494092 25494196 . + . Parent=GSCOCT00033613001 | |
| 50307 chr10 manual_curation exon 25494343 25494560 . + . Parent=GSCOCT00033613001 | |
| 50308 chr10 manual_curation exon 25494720 25494772 . + . Parent=GSCOCT00033613001 | |
| 50309 chr10 manual_curation exon 25494941 25495061 . + . Parent=GSCOCT00033613001 | |
| 50310 chr10 manual_curation exon 25495258 25495375 . + . Parent=GSCOCT00033613001 | |
| 50311 chr10 manual_curation exon 25496140 25496226 . + . Parent=GSCOCT00033613001 | |
| 50312 chr10 manual_curation exon 25496612 25496826 . + . Parent=GSCOCT00033613001 | |
| 50313 chr10 manual_curation exon 25496911 25497003 . + . Parent=GSCOCT00033613001 | |
| 50314 chr10 manual_curation exon 25497291 25497414 . + . Parent=GSCOCT00033613001 | |
| 50315 chr10 manual_curation exon 25498043 25498190 . + . Parent=GSCOCT00033613001 | |
| 50316 chr10 manual_curation exon 25498809 25498878 . + . Parent=GSCOCT00033613001 | |
| 50317 chr10 manual_curation exon 25499131 25499291 . + . Parent=GSCOCT00033613001 | |
| 50318 chr10 manual_curation exon 25499566 25499741 . + . Parent=GSCOCT00033613001 | |
| 50319 chr10 manual_curation exon 25499854 25500514 . + . Parent=GSCOCT00033613001 | |
| 50320 chr10 manual_curation CDS 25493107 25493306 . + 0 Parent=GSCOCT00033613001 | |
| 50321 chr10 manual_curation CDS 25493904 25493996 . + 2 Parent=GSCOCT00033613001 | |
| 50322 chr10 manual_curation CDS 25494092 25494196 . + 2 Parent=GSCOCT00033613001 | |
| 50323 chr10 manual_curation CDS 25494343 25494560 . + 2 Parent=GSCOCT00033613001 | |
| 50324 chr10 manual_curation CDS 25494720 25494772 . + 1 Parent=GSCOCT00033613001 | |
| 50325 chr10 manual_curation CDS 25494941 25495061 . + 0 Parent=GSCOCT00033613001 | |
| 50326 chr10 manual_curation CDS 25495258 25495375 . + 1 Parent=GSCOCT00033613001 | |
| 50327 chr10 manual_curation CDS 25496140 25496226 . + 2 Parent=GSCOCT00033613001 | |
| 50328 chr10 manual_curation CDS 25496612 25496826 . + 2 Parent=GSCOCT00033613001 | |
| 50329 chr10 manual_curation CDS 25496911 25497003 . + 1 Parent=GSCOCT00033613001 | |
| 50330 chr10 manual_curation CDS 25497291 25497414 . + 1 Parent=GSCOCT00033613001 | |
| 50331 chr10 manual_curation CDS 25498043 25498190 . + 2 Parent=GSCOCT00033613001 | |
| 50332 chr10 manual_curation CDS 25498809 25498878 . + 0 Parent=GSCOCT00033613001 | |
| 50333 chr10 manual_curation CDS 25499131 25499291 . + 1 Parent=GSCOCT00033613001 | |
| 50334 chr10 manual_curation CDS 25499566 25499741 . + 0 Parent=GSCOCT00033613001 | |
| 50335 chr10 manual_curation CDS 25499854 25500004 . + 2 Parent=GSCOCT00033613001 | |
| 50336 chr10 manual_curation gene 25502059 25505914 . + . ID=GSCOCG00033614001;Name=Cc10_g14690 | |
| 50337 chr10 manual_curation mRNA 25502059 25505914 . + . ID=GSCOCT00033614001;Parent=GSCOCG00033614001;Name=Cc10_g14690 | |
| 50338 chr10 manual_curation polypeptide 25502298 25504463 . + . ID=GSCOCP00033614001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q9FVX2,SwissProt:Q9FZ19,SwissProt:Q9M2C8,TAIR:AT1G02420.1,TAIR:AT1G77360.1,TAIR:AT3G61360.1,TIGRFAMs:TIGR00756,TrEMBL:A5AKR5,TrEMBL:B9MUD6,TrEMBL:D7SS92;Derives_from=GSCOCT00033614001;Name=Cc10_g14690;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At3g61360,CC_functional_completeness:complete,CC_gene:At3g61360,CC_gene:At1g02420,CC_gene:At1g77360;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033614001~ Pentatricopeptide repeat-containing protein At3g61360~ At3g61360~ complete;original_location=join(357300..357314%2C357880..357898%2C358048..359465);owner=coffea | |
| 50339 chr10 manual_curation exon 25502059 25502312 . + . Parent=GSCOCT00033614001 | |
| 50340 chr10 manual_curation exon 25502878 25502896 . + . Parent=GSCOCT00033614001 | |
| 50341 chr10 manual_curation exon 25503046 25505914 . + . Parent=GSCOCT00033614001 | |
| 50342 chr10 manual_curation CDS 25502298 25502312 . + 0 Parent=GSCOCT00033614001 | |
| 50343 chr10 manual_curation CDS 25502878 25502896 . + 0 Parent=GSCOCT00033614001 | |
| 50344 chr10 manual_curation CDS 25503046 25504463 . + 1 Parent=GSCOCT00033614001 | |
| 50345 chr10 manual_curation gene 25507510 25511253 . + . ID=GSCOCG00033615001;Name=Cc10_g14700 | |
| 50346 chr10 manual_curation mRNA 25507510 25511253 . + . ID=GSCOCT00033615001;Parent=GSCOCG00033615001;Name=Cc10_g14700 | |
| 50347 chr10 manual_curation polypeptide 25508883 25510375 . + . ID=GSCOCP00033615001;Dbxref=InterPro:IPR004000,InterPro:IPR004001,InterPro:IPR020902,PANTHER:PTHR11937,PFAM:PF00022,PRINTS:PR00190,PROSITE:PS00406,PROSITE:PS00432,PROSITE:PS01132,SMART:SM00268,SwissProt:P30167,SwissProt:P53496,SwissProt:Q05214,TAIR:AT3G12110.1,TAIR:AT3G53750.1,TAIR:AT5G09810.1,TrEMBL:A2WZE8,TrEMBL:I1NVI1,TrEMBL:Q94DL4;Derives_from=GSCOCT00033615001;Name=Cc10_g14700;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0005524,CC_EC_number:missing_EC_number,PRODUCT:Actin-11,CC_functional_completeness:complete,CC_gene:ACT11,CC_gene:AC58;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033615001~ Actin-11~ ACT11~ complete;original_location=join(363885..363944%2C364037..364430%2C364518..365131%2C365312..365377);owner=coffea | |
| 50348 chr10 manual_curation exon 25507510 25507786 . + . Parent=GSCOCT00033615001 | |
| 50349 chr10 manual_curation exon 25508872 25508942 . + . Parent=GSCOCT00033615001 | |
| 50350 chr10 manual_curation exon 25509035 25509428 . + . Parent=GSCOCT00033615001 | |
| 50351 chr10 manual_curation exon 25509516 25510129 . + . Parent=GSCOCT00033615001 | |
| 50352 chr10 manual_curation exon 25510310 25511253 . + . Parent=GSCOCT00033615001 | |
| 50353 chr10 manual_curation CDS 25508883 25508942 . + 0 Parent=GSCOCT00033615001 | |
| 50354 chr10 manual_curation CDS 25509035 25509428 . + 0 Parent=GSCOCT00033615001 | |
| 50355 chr10 manual_curation CDS 25509516 25510129 . + 1 Parent=GSCOCT00033615001 | |
| 50356 chr10 manual_curation CDS 25510310 25510375 . + 0 Parent=GSCOCT00033615001 | |
| 50357 chr10 manual_curation gene 25512513 25513001 . + . ID=GSCOCG00033616001;Name=Cc10_g14710 | |
| 50358 chr10 manual_curation mRNA 25512513 25513001 . + . ID=GSCOCT00033616001;Parent=GSCOCG00033616001;Name=Cc10_g14710 | |
| 50359 chr10 manual_curation polypeptide 25512591 25513001 . + . ID=GSCOCP00033616001;Dbxref=GENE3D:G3DSA:1.10.20.10,InterPro:IPR000164,InterPro:IPR007125,InterPro:IPR009072,PANTHER:PTHR11426,PFAM:PF00125,PRINTS:PR00622,PROSITE:PS00322,PROSITE:PS00959,SMART:SM00428,SUPERFAMILY:SSF47113,SwissProt:P69248,SwissProt:Q2RAD9,SwissProt:Q76MV0,TAIR:AT5G10390.1,TAIR:AT5G10400.1,TAIR:AT5G65360.1,TrEMBL:I0J3D5,TrEMBL:I1NTN6,TrEMBL:Q0WRA9,TrEMBL:Q4AC00,TrEMBL:Q71CZ4;Derives_from=GSCOCT00033616001;Name=Cc10_g14710;Ontology_term=CC_evidence_code:ISS,GO:0000786,GO:0003677,GO:0006334,CC_EC_number:missing_EC_number,PRODUCT:Histone H3.2,CC_functional_completeness:complete,CC_gene:B34,CC_gene:H3-7,CC_gene:Os01g0866200;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033616001~ Histone H3.2~ B34~ complete;original_location=367593..368003;owner=coffea | |
| 50360 chr10 manual_curation exon 25512513 25513001 . + . Parent=GSCOCT00033616001 | |
| 50361 chr10 manual_curation CDS 25512591 25513001 . + 0 Parent=GSCOCT00033616001 | |
| 50362 chr10 manual_curation gene 25514842 25516905 . - . ID=GSCOCG00033618001;Name=Cc10_g14720 | |
| 50363 chr10 manual_curation mRNA 25514842 25516905 . - . ID=GSCOCT00033618001;Parent=GSCOCG00033618001;Name=Cc10_g14720 | |
| 50364 chr10 manual_curation polypeptide 25514842 25516119 . - . ID=GSCOCP00033618001;Dbxref=InterPro:IPR021099,PFAM:PF11955,TAIR:AT2G31290.1,TAIR:AT3G63090.1,TAIR:AT5G21970.1,TrEMBL:B9H7R4,TrEMBL:B9T2G7,TrEMBL:F6GY20;Derives_from=GSCOCT00033618001;Name=Cc10_g14720;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Ubiquitin carboxyl-terminal hydrolase family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033618001~ Ubiquitin carboxyl-terminal hydrolase family protein~ unknown_gene~ complete;original_location=complement(369844..371121);owner=coffea | |
| 50365 chr10 manual_curation exon 25516732 25516905 . - . Parent=GSCOCT00033618001 | |
| 50366 chr10 manual_curation exon 25514842 25516152 . - . Parent=GSCOCT00033618001 | |
| 50367 chr10 manual_curation CDS 25514842 25516119 . - 0 Parent=GSCOCT00033618001 | |
| 50368 chr10 manual_curation gene 25519065 25527086 . - . ID=GSCOCG00033619001;Name=Cc10_g14730 | |
| 50369 chr10 manual_curation mRNA 25519065 25527086 . - . ID=GSCOCT00033619001;Parent=GSCOCG00033619001;Name=Cc10_g14730 | |
| 50370 chr10 manual_curation polypeptide 25519558 25526763 . - . ID=GSCOCP00033619001;Dbxref=InterPro:IPR003903,PROFILE:PS50330,SMART:SM00726,SwissProt:Q0IIH8,SwissProt:Q4R528,SwissProt:Q9H8M7,TAIR:AT1G43690.1,TrEMBL:B9H7R6,TrEMBL:B9T2G6,TrEMBL:D7SRB3;Derives_from=GSCOCT00033619001;Name=Cc10_g14730;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein FAM188A,CC_functional_completeness:modules,CC_gene:FAM188A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033619001~ Putative Protein FAM188A~ FAM188A~ modules;original_location=complement(join(381290..381765%2C379867..379945%2C378710..378858%2C377701..377812%2C377330..377515%2C375525..375596%2C374560..375390));owner=coffea | |
| 50371 chr10 manual_curation exon 25519065 25520388 . - . Parent=GSCOCT00033619001 | |
| 50372 chr10 manual_curation exon 25520523 25520594 . - . Parent=GSCOCT00033619001 | |
| 50373 chr10 manual_curation exon 25522328 25522513 . - . Parent=GSCOCT00033619001 | |
| 50374 chr10 manual_curation exon 25522699 25522810 . - . Parent=GSCOCT00033619001 | |
| 50375 chr10 manual_curation exon 25523708 25523856 . - . Parent=GSCOCT00033619001 | |
| 50376 chr10 manual_curation exon 25524865 25524943 . - . Parent=GSCOCT00033619001 | |
| 50377 chr10 manual_curation exon 25526288 25527086 . - . Parent=GSCOCT00033619001 | |
| 50378 chr10 manual_curation CDS 25519558 25520388 . - 0 Parent=GSCOCT00033619001 | |
| 50379 chr10 manual_curation CDS 25520523 25520594 . - 0 Parent=GSCOCT00033619001 | |
| 50380 chr10 manual_curation CDS 25522328 25522513 . - 0 Parent=GSCOCT00033619001 | |
| 50381 chr10 manual_curation CDS 25522699 25522810 . - 2 Parent=GSCOCT00033619001 | |
| 50382 chr10 manual_curation CDS 25523708 25523856 . - 0 Parent=GSCOCT00033619001 | |
| 50383 chr10 manual_curation CDS 25524865 25524943 . - 2 Parent=GSCOCT00033619001 | |
| 50384 chr10 manual_curation CDS 25526288 25526763 . - 0 Parent=GSCOCT00033619001 | |
| 50385 chr10 manual_curation gene 25535394 25539988 . + . ID=GSCOCG00033620001;Name=Cc10_g14740 | |
| 50386 chr10 manual_curation mRNA 25535394 25539988 . + . ID=GSCOCT00033620001;Parent=GSCOCG00033620001;Name=Cc10_g14740 | |
| 50387 chr10 manual_curation polypeptide 25535735 25539653 . + . ID=GSCOCP00033620001;Dbxref=HAMAP:MF_01855,InterPro:IPR000146,InterPro:IPR020548,InterPro:IPR022868,PANTHER:PTHR11556,PFAM:PF00316,PRINTS:PR00115,PROSITE:PS00124,SwissProt:P14766,SwissProt:P46276,SwissProt:Q42649,TAIR:AT1G43670.1,TAIR:AT3G54050.1,TAIR:AT5G64380.1,TrEMBL:A6N9A0,TrEMBL:B9H7R7,TrEMBL:D7SRB4;Derives_from=GSCOCT00033620001;Name=Cc10_g14740;Ontology_term=CC_evidence_code:ISS,GO:0005975,GO:0042578,CC_EC_number:3.1.3.11,PRODUCT:Fructose-1%2C6-bisphosphatase%2C cytosolic,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033620001~ Fructose-1%2C6-bisphosphatase%2C cytosolic~ unknown_gene~ complete;original_location=join(390737..390895%2C392034..392081%2C392182..392256%2C392349..392410%2C392511..392577%2C392684..392797%2C392980..393066%2C393645..393715%2C393782..393847%2C394103..394189%2C394319..394394%2C394545..394655);owner=coffea | |
| 50388 chr10 manual_curation exon 25535394 25535893 . + . Parent=GSCOCT00033620001 | |
| 50389 chr10 manual_curation exon 25537032 25537079 . + . Parent=GSCOCT00033620001 | |
| 50390 chr10 manual_curation exon 25537180 25537254 . + . Parent=GSCOCT00033620001 | |
| 50391 chr10 manual_curation exon 25537347 25537408 . + . Parent=GSCOCT00033620001 | |
| 50392 chr10 manual_curation exon 25537509 25537575 . + . Parent=GSCOCT00033620001 | |
| 50393 chr10 manual_curation exon 25537682 25537795 . + . Parent=GSCOCT00033620001 | |
| 50394 chr10 manual_curation exon 25537978 25538064 . + . Parent=GSCOCT00033620001 | |
| 50395 chr10 manual_curation exon 25538643 25538713 . + . Parent=GSCOCT00033620001 | |
| 50396 chr10 manual_curation exon 25538780 25538845 . + . Parent=GSCOCT00033620001 | |
| 50397 chr10 manual_curation exon 25539101 25539187 . + . Parent=GSCOCT00033620001 | |
| 50398 chr10 manual_curation exon 25539317 25539392 . + . Parent=GSCOCT00033620001 | |
| 50399 chr10 manual_curation exon 25539543 25539988 . + . Parent=GSCOCT00033620001 | |
| 50400 chr10 manual_curation CDS 25535735 25535893 . + 0 Parent=GSCOCT00033620001 | |
| 50401 chr10 manual_curation CDS 25537032 25537079 . + 0 Parent=GSCOCT00033620001 | |
| 50402 chr10 manual_curation CDS 25537180 25537254 . + 0 Parent=GSCOCT00033620001 | |
| 50403 chr10 manual_curation CDS 25537347 25537408 . + 0 Parent=GSCOCT00033620001 | |
| 50404 chr10 manual_curation CDS 25537509 25537575 . + 2 Parent=GSCOCT00033620001 | |
| 50405 chr10 manual_curation CDS 25537682 25537795 . + 0 Parent=GSCOCT00033620001 | |
| 50406 chr10 manual_curation CDS 25537978 25538064 . + 0 Parent=GSCOCT00033620001 | |
| 50407 chr10 manual_curation CDS 25538643 25538713 . + 0 Parent=GSCOCT00033620001 | |
| 50408 chr10 manual_curation CDS 25538780 25538845 . + 2 Parent=GSCOCT00033620001 | |
| 50409 chr10 manual_curation CDS 25539101 25539187 . + 2 Parent=GSCOCT00033620001 | |
| 50410 chr10 manual_curation CDS 25539317 25539392 . + 2 Parent=GSCOCT00033620001 | |
| 50411 chr10 manual_curation CDS 25539543 25539653 . + 0 Parent=GSCOCT00033620001 | |
| 50412 chr10 manual_curation gene 25544011 25560323 . + . ID=GSCOCG00033621001;Name=Cc10_g14750 | |
| 50413 chr10 manual_curation mRNA 25544011 25560323 . + . ID=GSCOCT00033621001;Parent=GSCOCG00033621001;Name=Cc10_g14750 | |
| 50414 chr10 manual_curation polypeptide 25544243 25560025 . + . ID=GSCOCP00033621001;Dbxref=SwissProt:Q8S3U9,SwissProt:Q96KP1,SwissProt:Q9D4H1,TAIR:AT1G21170.1,TAIR:AT1G76850.1,TrEMBL:B9GTJ6,TrEMBL:B9T2G4,TrEMBL:F6GY23;Derives_from=GSCOCT00033621001;Name=Cc10_g14750;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Exocyst complex component 2,CC_functional_completeness:complete,CC_gene:SEC5A,CC_gene:Exoc2,CC_gene:EXOC2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033621001~ Exocyst complex component 2~ SEC5A~ complete;original_location=join(399245..399739%2C400289..400434%2C400519..400610%2C402467..402661%2C402744..402871%2C403013..403171%2C404133..404237%2C405456..405530%2C406807..406938%2C407038..407208%2C408336..408425%2C409578..409704%2C409779..409989%2C410558..410673%2C410759..410993%2C411626..411719%2C413077..413154%2C413243..413299%2C413525..413674%2C414302..414517%2C414785..415027);owner=coffea | |
| 50415 chr10 manual_curation exon 25544011 25544737 . + . Parent=GSCOCT00033621001 | |
| 50416 chr10 manual_curation exon 25545287 25545432 . + . Parent=GSCOCT00033621001 | |
| 50417 chr10 manual_curation exon 25545517 25545608 . + . Parent=GSCOCT00033621001 | |
| 50418 chr10 manual_curation exon 25547465 25547659 . + . Parent=GSCOCT00033621001 | |
| 50419 chr10 manual_curation exon 25547742 25547869 . + . Parent=GSCOCT00033621001 | |
| 50420 chr10 manual_curation exon 25548011 25548169 . + . Parent=GSCOCT00033621001 | |
| 50421 chr10 manual_curation exon 25549131 25549235 . + . Parent=GSCOCT00033621001 | |
| 50422 chr10 manual_curation exon 25550454 25550528 . + . Parent=GSCOCT00033621001 | |
| 50423 chr10 manual_curation exon 25551805 25551936 . + . Parent=GSCOCT00033621001 | |
| 50424 chr10 manual_curation exon 25552036 25552206 . + . Parent=GSCOCT00033621001 | |
| 50425 chr10 manual_curation exon 25553334 25553423 . + . Parent=GSCOCT00033621001 | |
| 50426 chr10 manual_curation exon 25554576 25554702 . + . Parent=GSCOCT00033621001 | |
| 50427 chr10 manual_curation exon 25554777 25554987 . + . Parent=GSCOCT00033621001 | |
| 50428 chr10 manual_curation exon 25555556 25555671 . + . Parent=GSCOCT00033621001 | |
| 50429 chr10 manual_curation exon 25555757 25555991 . + . Parent=GSCOCT00033621001 | |
| 50430 chr10 manual_curation exon 25556624 25556717 . + . Parent=GSCOCT00033621001 | |
| 50431 chr10 manual_curation exon 25558075 25558152 . + . Parent=GSCOCT00033621001 | |
| 50432 chr10 manual_curation exon 25558241 25558297 . + . Parent=GSCOCT00033621001 | |
| 50433 chr10 manual_curation exon 25558523 25558672 . + . Parent=GSCOCT00033621001 | |
| 50434 chr10 manual_curation exon 25559300 25559515 . + . Parent=GSCOCT00033621001 | |
| 50435 chr10 manual_curation exon 25559783 25560323 . + . Parent=GSCOCT00033621001 | |
| 50436 chr10 manual_curation CDS 25544243 25544737 . + 0 Parent=GSCOCT00033621001 | |
| 50437 chr10 manual_curation CDS 25545287 25545432 . + 0 Parent=GSCOCT00033621001 | |
| 50438 chr10 manual_curation CDS 25545517 25545608 . + 2 Parent=GSCOCT00033621001 | |
| 50439 chr10 manual_curation CDS 25547465 25547659 . + 1 Parent=GSCOCT00033621001 | |
| 50440 chr10 manual_curation CDS 25547742 25547869 . + 1 Parent=GSCOCT00033621001 | |
| 50441 chr10 manual_curation CDS 25548011 25548169 . + 0 Parent=GSCOCT00033621001 | |
| 50442 chr10 manual_curation CDS 25549131 25549235 . + 0 Parent=GSCOCT00033621001 | |
| 50443 chr10 manual_curation CDS 25550454 25550528 . + 0 Parent=GSCOCT00033621001 | |
| 50444 chr10 manual_curation CDS 25551805 25551936 . + 0 Parent=GSCOCT00033621001 | |
| 50445 chr10 manual_curation CDS 25552036 25552206 . + 0 Parent=GSCOCT00033621001 | |
| 50446 chr10 manual_curation CDS 25553334 25553423 . + 0 Parent=GSCOCT00033621001 | |
| 50447 chr10 manual_curation CDS 25554576 25554702 . + 0 Parent=GSCOCT00033621001 | |
| 50448 chr10 manual_curation CDS 25554777 25554987 . + 1 Parent=GSCOCT00033621001 | |
| 50449 chr10 manual_curation CDS 25555556 25555671 . + 2 Parent=GSCOCT00033621001 | |
| 50450 chr10 manual_curation CDS 25555757 25555991 . + 1 Parent=GSCOCT00033621001 | |
| 50451 chr10 manual_curation CDS 25556624 25556717 . + 2 Parent=GSCOCT00033621001 | |
| 50452 chr10 manual_curation CDS 25558075 25558152 . + 0 Parent=GSCOCT00033621001 | |
| 50453 chr10 manual_curation CDS 25558241 25558297 . + 0 Parent=GSCOCT00033621001 | |
| 50454 chr10 manual_curation CDS 25558523 25558672 . + 0 Parent=GSCOCT00033621001 | |
| 50455 chr10 manual_curation CDS 25559300 25559515 . + 0 Parent=GSCOCT00033621001 | |
| 50456 chr10 manual_curation CDS 25559783 25560025 . + 0 Parent=GSCOCT00033621001 | |
| 50457 chr10 manual_curation gene 25560381 25563479 . - . ID=GSCOCG00033622001;Name=Cc10_g14760 | |
| 50458 chr10 manual_curation mRNA 25560381 25563479 . - . ID=GSCOCT00033622001;Parent=GSCOCG00033622001;Name=Cc10_g14760 | |
| 50459 chr10 manual_curation polypeptide 25560663 25563351 . - . ID=GSCOCP00033622001;Dbxref=InterPro:IPR001163,InterPro:IPR006649,InterPro:IPR010920,PFAM:PF01423,SMART:SM00651,SUPERFAMILY:SSF50182,SwissProt:P62310,SwissProt:P62311,SwissProt:Q32PE9,TAIR:AT1G21190.1,TAIR:AT1G76860.1,TrEMBL:B9T2G3,TrEMBL:G7JHJ2,TrEMBL:I1JDF2;Derives_from=GSCOCT00033622001;Name=Cc10_g14760;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:U6 snRNA-associated Sm-like protein LSm3,CC_functional_completeness:complete,CC_gene:Lsm3,CC_gene:LSM3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033622001~ U6 snRNA-associated Sm-like protein LSm3~ Lsm3~ complete;original_location=complement(join(418234..418353%2C416973..417068%2C415665..415745));owner=coffea | |
| 50460 chr10 manual_curation exon 25560381 25560743 . - . Parent=GSCOCT00033622001 | |
| 50461 chr10 manual_curation exon 25561971 25562066 . - . Parent=GSCOCT00033622001 | |
| 50462 chr10 manual_curation exon 25563232 25563479 . - . Parent=GSCOCT00033622001 | |
| 50463 chr10 manual_curation CDS 25560663 25560743 . - 0 Parent=GSCOCT00033622001 | |
| 50464 chr10 manual_curation CDS 25561971 25562066 . - 0 Parent=GSCOCT00033622001 | |
| 50465 chr10 manual_curation CDS 25563232 25563351 . - 0 Parent=GSCOCT00033622001 | |
| 50466 chr10 manual_curation gene 25581344 25585907 . + . ID=GSCOCG00033623001;Name=Cc10_g14770 | |
| 50467 chr10 manual_curation mRNA 25581344 25585907 . + . ID=GSCOCT00033623001;Parent=GSCOCG00033623001;Name=Cc10_g14770 | |
| 50468 chr10 manual_curation polypeptide 25582544 25585074 . + . ID=GSCOCP00033623001;Dbxref=InterPro:IPR001005,InterPro:IPR017877,PROFILE:PS50090,SMART:SM00717,SwissProt:Q39117,SwissProt:Q8H181,SwissProt:Q9C882,TAIR:AT1G76880.1,TAIR:AT1G76890.2,TAIR:AT5G03680.1,TrEMBL:B9GTJ3,TrEMBL:F6GY30,TrEMBL:I1MP73;Derives_from=GSCOCT00033623001;Name=Cc10_g14770;Ontology_term=CC_evidence_code:ISS,GO:0003677,CC_EC_number:missing_EC_number,PRODUCT:Putative Trihelix transcription factor GT-2,CC_functional_completeness:complete,CC_gene:GT-2,CC_gene:At5g28300,CC_gene:GTL1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033623001~ Putative Trihelix transcription factor GT-2~ GT-2~ complete;original_location=join(437546..437604%2C438384..438647%2C438732..439305%2C439477..440076);owner=coffea | |
| 50469 chr10 manual_curation exon 25581344 25582602 . + . Parent=GSCOCT00033623001 | |
| 50470 chr10 manual_curation exon 25583382 25583645 . + . Parent=GSCOCT00033623001 | |
| 50471 chr10 manual_curation exon 25583730 25584303 . + . Parent=GSCOCT00033623001 | |
| 50472 chr10 manual_curation exon 25584475 25585907 . + . Parent=GSCOCT00033623001 | |
| 50473 chr10 manual_curation CDS 25582544 25582602 . + 0 Parent=GSCOCT00033623001 | |
| 50474 chr10 manual_curation CDS 25583382 25583645 . + 2 Parent=GSCOCT00033623001 | |
| 50475 chr10 manual_curation CDS 25583730 25584303 . + 2 Parent=GSCOCT00033623001 | |
| 50476 chr10 manual_curation CDS 25584475 25585074 . + 0 Parent=GSCOCT00033623001 | |
| 50477 chr10 manual_curation gene 25596390 25597378 . + . ID=GSCOCG00033624001;Name=Cc10_g14780 | |
| 50478 chr10 manual_curation mRNA 25596390 25597378 . + . ID=GSCOCT00033624001;Parent=GSCOCG00033624001;Name=Cc10_g14780 | |
| 50479 chr10 manual_curation polypeptide 25596390 25597378 . + . ID=GSCOCP00033624001;Derives_from=GSCOCT00033624001;Name=Cc10_g14780;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033624001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(451392..451560%2C452358..452380);owner=coffea | |
| 50480 chr10 manual_curation exon 25596390 25596558 . + . Parent=GSCOCT00033624001 | |
| 50481 chr10 manual_curation exon 25597356 25597378 . + . Parent=GSCOCT00033624001 | |
| 50482 chr10 manual_curation CDS 25596390 25596558 . + 0 Parent=GSCOCT00033624001 | |
| 50483 chr10 manual_curation CDS 25597356 25597378 . + 1 Parent=GSCOCT00033624001 | |
| 50484 chr10 manual_curation gene 25597454 25599838 . + . ID=GSCOCG00033625001;Name=Cc10_g14790 | |
| 50485 chr10 manual_curation mRNA 25597454 25599838 . + . ID=GSCOCT00033625001;Parent=GSCOCG00033625001;Name=Cc10_g14790 | |
| 50486 chr10 manual_curation polypeptide 25597454 25599355 . + . ID=GSCOCP00033625001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:O82380,SwissProt:Q9FI80,SwissProt:Q9FJY7,TAIR:AT2G29760.1,TAIR:AT5G48910.1,TAIR:AT5G66520.1,TIGRFAMs:TIGR00756,TrEMBL:A5APN9,TrEMBL:B9GFZ3,TrEMBL:F6I576;Derives_from=GSCOCT00033625001;Name=Cc10_g14790;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Pentatricopeptide repeat-containing protein At5g66520,CC_functional_completeness:complete,CC_gene:PCMP-H61,CC_gene:PCMP-H38,CC_gene:PCMP-H33;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033625001~ Putative Pentatricopeptide repeat-containing protein At5g66520~ PCMP-H61~ complete;original_location=452456..454357;owner=coffea | |
| 50487 chr10 manual_curation exon 25597454 25599838 . + . Parent=GSCOCT00033625001 | |
| 50488 chr10 manual_curation CDS 25597454 25599355 . + 0 Parent=GSCOCT00033625001 | |
| 50489 chr10 manual_curation gene 25605742 25612058 . - . ID=GSCOCG00033628001;Name=Cc10_g14800 | |
| 50490 chr10 manual_curation mRNA 25605742 25612058 . - . ID=GSCOCT00033628001;Parent=GSCOCG00033628001;Name=Cc10_g14800 | |
| 50491 chr10 manual_curation polypeptide 25605913 25612058 . - . ID=GSCOCP00033628001;Dbxref=InterPro:IPR013894,PFAM:PF08585,SwissProt:Q5ZHV8,SwissProt:Q6DDH2,SwissProt:Q9H9A7,TAIR:AT5G63540.2,TrEMBL:B9IFF4,TrEMBL:D7MPP9,TrEMBL:D7SH22;Derives_from=GSCOCT00033628001;Name=Cc10_g14800;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Domain of unknown function (DUF1767),CC_functional_completeness:complete,CC_gene:rmi1,CC_gene:RMI1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033628001~ Putative Domain of unknown function (DUF1767)~ rmi1~ complete;original_location=complement(join(466428..467060%2C465745..465915%2C465155..465300%2C464432..464591%2C463906..464036%2C463619..463705%2C463071..463404%2C462482..462592%2C462285..462413%2C460915..461097));owner=coffea | |
| 50492 chr10 manual_curation exon 25605742 25606095 . - . Parent=GSCOCT00033628001 | |
| 50493 chr10 manual_curation exon 25607283 25607411 . - . Parent=GSCOCT00033628001 | |
| 50494 chr10 manual_curation exon 25607480 25607590 . - . Parent=GSCOCT00033628001 | |
| 50495 chr10 manual_curation exon 25608069 25608402 . - . Parent=GSCOCT00033628001 | |
| 50496 chr10 manual_curation exon 25608617 25608703 . - . Parent=GSCOCT00033628001 | |
| 50497 chr10 manual_curation exon 25608904 25609034 . - . Parent=GSCOCT00033628001 | |
| 50498 chr10 manual_curation exon 25609430 25609589 . - . Parent=GSCOCT00033628001 | |
| 50499 chr10 manual_curation exon 25610153 25610298 . - . Parent=GSCOCT00033628001 | |
| 50500 chr10 manual_curation exon 25610743 25610913 . - . Parent=GSCOCT00033628001 | |
| 50501 chr10 manual_curation exon 25611426 25612058 . - . Parent=GSCOCT00033628001 | |
| 50502 chr10 manual_curation CDS 25605913 25606095 . - 0 Parent=GSCOCT00033628001 | |
| 50503 chr10 manual_curation CDS 25607283 25607411 . - 0 Parent=GSCOCT00033628001 | |
| 50504 chr10 manual_curation CDS 25607480 25607590 . - 0 Parent=GSCOCT00033628001 | |
| 50505 chr10 manual_curation CDS 25608069 25608402 . - 2 Parent=GSCOCT00033628001 | |
| 50506 chr10 manual_curation CDS 25608617 25608703 . - 2 Parent=GSCOCT00033628001 | |
| 50507 chr10 manual_curation CDS 25608904 25609034 . - 0 Parent=GSCOCT00033628001 | |
| 50508 chr10 manual_curation CDS 25609430 25609589 . - 2 Parent=GSCOCT00033628001 | |
| 50509 chr10 manual_curation CDS 25610153 25610298 . - 0 Parent=GSCOCT00033628001 | |
| 50510 chr10 manual_curation CDS 25610743 25610913 . - 0 Parent=GSCOCT00033628001 | |
| 50511 chr10 manual_curation CDS 25611426 25612058 . - 0 Parent=GSCOCT00033628001 | |
| 50512 chr10 manual_curation gene 25627466 25630427 . + . ID=GSCOCG00033629001;Name=Cc10_g14810 | |
| 50513 chr10 manual_curation mRNA 25627466 25630427 . + . ID=GSCOCT00033629001;Parent=GSCOCG00033629001;Name=Cc10_g14810 | |
| 50514 chr10 manual_curation polypeptide 25627512 25630240 . + . ID=GSCOCP00033629001;Dbxref=InterPro:IPR000620,PFAM:PF00892,SwissProt:Q6J163,TAIR:AT1G43650.1,TAIR:AT5G13670.1,TAIR:AT5G64700.1,TrEMBL:A5AS30,TrEMBL:B9GTI9,TrEMBL:B9H7S2;Derives_from=GSCOCT00033629001;Name=Cc10_g14810;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative Auxin-induced protein 5NG4,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033629001~ Putative Auxin-induced protein 5NG4~ unknown_gene~ complete;original_location=join(482514..482716%2C482864..482926%2C483094..483210%2C483305..483554%2C483705..483863%2C484247..484398%2C485074..485242);owner=coffea | |
| 50515 chr10 manual_curation exon 25627466 25627714 . + . Parent=GSCOCT00033629001 | |
| 50516 chr10 manual_curation exon 25627862 25627924 . + . Parent=GSCOCT00033629001 | |
| 50517 chr10 manual_curation exon 25628092 25628208 . + . Parent=GSCOCT00033629001 | |
| 50518 chr10 manual_curation exon 25628303 25628552 . + . Parent=GSCOCT00033629001 | |
| 50519 chr10 manual_curation exon 25628703 25628861 . + . Parent=GSCOCT00033629001 | |
| 50520 chr10 manual_curation exon 25629245 25629396 . + . Parent=GSCOCT00033629001 | |
| 50521 chr10 manual_curation exon 25630072 25630427 . + . Parent=GSCOCT00033629001 | |
| 50522 chr10 manual_curation CDS 25627512 25627714 . + 0 Parent=GSCOCT00033629001 | |
| 50523 chr10 manual_curation CDS 25627862 25627924 . + 2 Parent=GSCOCT00033629001 | |
| 50524 chr10 manual_curation CDS 25628092 25628208 . + 2 Parent=GSCOCT00033629001 | |
| 50525 chr10 manual_curation CDS 25628303 25628552 . + 2 Parent=GSCOCT00033629001 | |
| 50526 chr10 manual_curation CDS 25628703 25628861 . + 0 Parent=GSCOCT00033629001 | |
| 50527 chr10 manual_curation CDS 25629245 25629396 . + 0 Parent=GSCOCT00033629001 | |
| 50528 chr10 manual_curation CDS 25630072 25630240 . + 2 Parent=GSCOCT00033629001 | |
| 50529 chr10 manual_curation gene 25663939 25667015 . + . ID=GSCOCG00033633001;Name=Cc10_g14820 | |
| 50530 chr10 manual_curation mRNA 25663939 25667015 . + . ID=GSCOCT00033633001;Parent=GSCOCG00033633001;Name=Cc10_g14820 | |
| 50531 chr10 manual_curation polypeptide 25663939 25667015 . + . ID=GSCOCP00033633001;Dbxref=InterPro:IPR000620,PFAM:PF00892,SwissProt:Q6J163,TAIR:AT1G43650.1,TAIR:AT1G44800.1,TAIR:AT5G64700.1,TrEMBL:A5AS30,TrEMBL:B9GTI9,TrEMBL:B9H7S2;Derives_from=GSCOCT00033633001;Name=Cc10_g14820;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative Auxin-induced protein 5NG4,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033633001~ Putative Auxin-induced protein 5NG4~ unknown_gene~ complete;original_location=join(518941..519140%2C519244..519306%2C519427..519543%2C519633..519867%2C519999..520157%2C521374..521525%2C521843..522017);owner=coffea | |
| 50532 chr10 manual_curation exon 25663939 25664138 . + . Parent=GSCOCT00033633001 | |
| 50533 chr10 manual_curation exon 25664242 25664304 . + . Parent=GSCOCT00033633001 | |
| 50534 chr10 manual_curation exon 25664425 25664541 . + . Parent=GSCOCT00033633001 | |
| 50535 chr10 manual_curation exon 25664631 25664865 . + . Parent=GSCOCT00033633001 | |
| 50536 chr10 manual_curation exon 25664997 25665155 . + . Parent=GSCOCT00033633001 | |
| 50537 chr10 manual_curation exon 25666372 25666523 . + . Parent=GSCOCT00033633001 | |
| 50538 chr10 manual_curation exon 25666841 25667015 . + . Parent=GSCOCT00033633001 | |
| 50539 chr10 manual_curation CDS 25663939 25664138 . + 0 Parent=GSCOCT00033633001 | |
| 50540 chr10 manual_curation CDS 25664242 25664304 . + 2 Parent=GSCOCT00033633001 | |
| 50541 chr10 manual_curation CDS 25664425 25664541 . + 2 Parent=GSCOCT00033633001 | |
| 50542 chr10 manual_curation CDS 25664631 25664865 . + 2 Parent=GSCOCT00033633001 | |
| 50543 chr10 manual_curation CDS 25664997 25665155 . + 0 Parent=GSCOCT00033633001 | |
| 50544 chr10 manual_curation CDS 25666372 25666523 . + 0 Parent=GSCOCT00033633001 | |
| 50545 chr10 manual_curation CDS 25666841 25667015 . + 2 Parent=GSCOCT00033633001 | |
| 50546 chr10 manual_curation gene 25683429 25685861 . + . ID=GSCOCG00033634001;Name=Cc10_g14830 | |
| 50547 chr10 manual_curation mRNA 25683429 25685861 . + . ID=GSCOCT00033634001;Parent=GSCOCG00033634001;Name=Cc10_g14830 | |
| 50548 chr10 manual_curation polypeptide 25683429 25685861 . + . ID=GSCOCP00033634001;Dbxref=InterPro:IPR004776,PFAM:PF03547,SwissProt:Q5JLM1,SwissProt:Q6ZIB5,SwissProt:Q9FFD0,TAIR:AT2G01420.2,TAIR:AT5G15100.1,TAIR:AT5G16530.1,TrEMBL:B9RFV4,TrEMBL:D7SPS3,TrEMBL:E5KGD6;Derives_from=GSCOCT00033634001;Name=Cc10_g14830;Ontology_term=CC_evidence_code:ISS,GO:0016021,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Putative auxin efflux carrier component 8,CC_functional_completeness:complete,CC_gene:PIN8,CC_gene:PIN6,CC_gene:PIN4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033634001~ Putative auxin efflux carrier component 8~ PIN8~ complete;original_location=join(538431..539125%2C539215..539300%2C539413..539570%2C540560..540636%2C540791..540863);owner=coffea | |
| 50549 chr10 manual_curation exon 25683429 25684123 . + . Parent=GSCOCT00033634001 | |
| 50550 chr10 manual_curation exon 25684213 25684298 . + . Parent=GSCOCT00033634001 | |
| 50551 chr10 manual_curation exon 25684411 25684568 . + . Parent=GSCOCT00033634001 | |
| 50552 chr10 manual_curation exon 25685558 25685634 . + . Parent=GSCOCT00033634001 | |
| 50553 chr10 manual_curation exon 25685789 25685861 . + . Parent=GSCOCT00033634001 | |
| 50554 chr10 manual_curation CDS 25683429 25684123 . + 0 Parent=GSCOCT00033634001 | |
| 50555 chr10 manual_curation CDS 25684213 25684298 . + 2 Parent=GSCOCT00033634001 | |
| 50556 chr10 manual_curation CDS 25684411 25684568 . + 1 Parent=GSCOCT00033634001 | |
| 50557 chr10 manual_curation CDS 25685558 25685634 . + 0 Parent=GSCOCT00033634001 | |
| 50558 chr10 manual_curation CDS 25685789 25685861 . + 2 Parent=GSCOCT00033634001 | |
| 50559 chr10 manual_curation gene 25694626 25700858 . + . ID=GSCOCG00033635001;Name=Cc10_g14840 | |
| 50560 chr10 manual_curation mRNA 25694626 25700858 . + . ID=GSCOCT00033635001;Parent=GSCOCG00033635001;Name=Cc10_g14840 | |
| 50561 chr10 manual_curation polypeptide 25696013 25700480 . + . ID=GSCOCP00033635001;Dbxref=GENE3D:G3DSA:3.20.90.10,InterPro:IPR000007,InterPro:IPR001810,InterPro:IPR018066,InterPro:IPR022364,PFAM:PF00646,PFAM:PF01167,PRINTS:PR01573,PROSITE:PS01200,PROSITE:PS01201,SUPERFAMILY:SSF54518,SUPERFAMILY:SSF81383,SwissProt:Q2QXB2,SwissProt:Q75HX5,SwissProt:Q7XSV4,TAIR:AT1G25280.1,TAIR:AT1G43640.1,TAIR:AT1G76900.1,TrEMBL:B9GTI8,TrEMBL:B9SE66,TrEMBL:F6GY33;Derives_from=GSCOCT00033635001;Name=Cc10_g14840;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Tubby-like F-box protein 8,CC_functional_completeness:complete,CC_gene:TULP8,CC_gene:TULP14,CC_gene:TULP7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033635001~ Tubby-like F-box protein 8~ TULP8~ complete;original_location=join(551015..551362%2C551513..551600%2C552739..552871%2C554765..555482);owner=coffea | |
| 50562 chr10 manual_curation exon 25694626 25694865 . + . Parent=GSCOCT00033635001 | |
| 50563 chr10 manual_curation exon 25695901 25696360 . + . Parent=GSCOCT00033635001 | |
| 50564 chr10 manual_curation exon 25696511 25696598 . + . Parent=GSCOCT00033635001 | |
| 50565 chr10 manual_curation exon 25697737 25697869 . + . Parent=GSCOCT00033635001 | |
| 50566 chr10 manual_curation exon 25699763 25700858 . + . Parent=GSCOCT00033635001 | |
| 50567 chr10 manual_curation CDS 25696013 25696360 . + 0 Parent=GSCOCT00033635001 | |
| 50568 chr10 manual_curation CDS 25696511 25696598 . + 0 Parent=GSCOCT00033635001 | |
| 50569 chr10 manual_curation CDS 25697737 25697869 . + 1 Parent=GSCOCT00033635001 | |
| 50570 chr10 manual_curation CDS 25699763 25700480 . + 2 Parent=GSCOCT00033635001 | |
| 50571 chr10 manual_curation gene 25721294 25728124 . + . ID=GSCOCG00033639001;Name=Cc10_g14850 | |
| 50572 chr10 manual_curation mRNA 25721294 25728124 . + . ID=GSCOCT00033639001;Parent=GSCOCG00033639001;Name=Cc10_g14850 | |
| 50573 chr10 manual_curation polypeptide 25723102 25728124 . + . ID=GSCOCP00033639001;Dbxref=InterPro:IPR011046,SUPERFAMILY:SSF50978,TrEMBL:A9PHJ5,TrEMBL:B9GTI6,TrEMBL:F6GY39;Derives_from=GSCOCT00033639001;Name=Cc10_g14850;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Predicted protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033639001~ Predicted protein~ unknown_gene~ complete;original_location=join(578104..578202%2C578355..578426%2C578947..579012%2C579093..579168%2C579685..579762%2C580349..580446%2C581456..581529%2C582096..582183%2C582270..582427%2C582994..583126);owner=coffea | |
| 50574 chr10 manual_curation exon 25721294 25723200 . + . Parent=GSCOCT00033639001 | |
| 50575 chr10 manual_curation exon 25723353 25723424 . + . Parent=GSCOCT00033639001 | |
| 50576 chr10 manual_curation exon 25723945 25724010 . + . Parent=GSCOCT00033639001 | |
| 50577 chr10 manual_curation exon 25724091 25724166 . + . Parent=GSCOCT00033639001 | |
| 50578 chr10 manual_curation exon 25724683 25724760 . + . Parent=GSCOCT00033639001 | |
| 50579 chr10 manual_curation exon 25725347 25725444 . + . Parent=GSCOCT00033639001 | |
| 50580 chr10 manual_curation exon 25726454 25726527 . + . Parent=GSCOCT00033639001 | |
| 50581 chr10 manual_curation exon 25727094 25727181 . + . Parent=GSCOCT00033639001 | |
| 50582 chr10 manual_curation exon 25727268 25727425 . + . Parent=GSCOCT00033639001 | |
| 50583 chr10 manual_curation exon 25727992 25728124 . + . Parent=GSCOCT00033639001 | |
| 50584 chr10 manual_curation CDS 25723102 25723200 . + 0 Parent=GSCOCT00033639001 | |
| 50585 chr10 manual_curation CDS 25723353 25723424 . + 0 Parent=GSCOCT00033639001 | |
| 50586 chr10 manual_curation CDS 25723945 25724010 . + 0 Parent=GSCOCT00033639001 | |
| 50587 chr10 manual_curation CDS 25724091 25724166 . + 0 Parent=GSCOCT00033639001 | |
| 50588 chr10 manual_curation CDS 25724683 25724760 . + 1 Parent=GSCOCT00033639001 | |
| 50589 chr10 manual_curation CDS 25725347 25725444 . + 1 Parent=GSCOCT00033639001 | |
| 50590 chr10 manual_curation CDS 25726454 25726527 . + 0 Parent=GSCOCT00033639001 | |
| 50591 chr10 manual_curation CDS 25727094 25727181 . + 2 Parent=GSCOCT00033639001 | |
| 50592 chr10 manual_curation CDS 25727268 25727425 . + 0 Parent=GSCOCT00033639001 | |
| 50593 chr10 manual_curation CDS 25727992 25728124 . + 2 Parent=GSCOCT00033639001 | |
| 50594 chr10 manual_curation gene 25797662 25799356 . + . ID=GSCOCG00033640001;Name=Cc10_g14860 | |
| 50595 chr10 manual_curation mRNA 25797662 25799356 . + . ID=GSCOCT00033640001;Parent=GSCOCG00033640001;Name=Cc10_g14860 | |
| 50596 chr10 manual_curation polypeptide 25797662 25799356 . + . ID=GSCOCP00033640001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,SwissProt:Q9LMF1,SwissProt:Q9SGA8,SwissProt:Q9SK82,TAIR:AT1G22380.1,TAIR:AT1G22400.1,TAIR:AT3G02100.1,TrEMBL:B9H0D2,TrEMBL:B9IK54,TrEMBL:F6H3Z9;Derives_from=GSCOCT00033640001;Name=Cc10_g14860;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:Putative UDP-glycosyltransferase 83A1,CC_functional_completeness:complete,CC_gene:UGT83A1,CC_gene:UGT85A3,CC_gene:UGT85A1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033640001~ Putative UDP-glycosyltransferase 83A1~ UGT83A1~ complete;original_location=join(652664..653175%2C653303..653345%2C653501..654358);owner=coffea | |
| 50597 chr10 manual_curation exon 25797662 25798173 . + . Parent=GSCOCT00033640001 | |
| 50598 chr10 manual_curation exon 25798301 25798343 . + . Parent=GSCOCT00033640001 | |
| 50599 chr10 manual_curation exon 25798499 25799356 . + . Parent=GSCOCT00033640001 | |
| 50600 chr10 manual_curation CDS 25797662 25798173 . + 0 Parent=GSCOCT00033640001 | |
| 50601 chr10 manual_curation CDS 25798301 25798343 . + 2 Parent=GSCOCT00033640001 | |
| 50602 chr10 manual_curation CDS 25798499 25799356 . + 0 Parent=GSCOCT00033640001 | |
| 50603 chr10 manual_curation gene 25804984 25808402 . + . ID=GSCOCG00033641001;Name=Cc10_g14870 | |
| 50604 chr10 manual_curation mRNA 25804984 25808402 . + . ID=GSCOCT00033641001;Parent=GSCOCG00033641001;Name=Cc10_g14870 | |
| 50605 chr10 manual_curation polypeptide 25806145 25807321 . + . ID=GSCOCP00033641001;Derives_from=GSCOCT00033641001;Name=Cc10_g14870;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033641001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(661147..661793%2C662260..662323);owner=coffea | |
| 50606 chr10 manual_curation exon 25808085 25808402 . + . Parent=GSCOCT00033641001 | |
| 50607 chr10 manual_curation exon 25804984 25806791 . + . Parent=GSCOCT00033641001 | |
| 50608 chr10 manual_curation exon 25807258 25807343 . + . Parent=GSCOCT00033641001 | |
| 50609 chr10 manual_curation CDS 25806145 25806791 . + 0 Parent=GSCOCT00033641001 | |
| 50610 chr10 manual_curation CDS 25807258 25807321 . + 2 Parent=GSCOCT00033641001 | |
| 50611 chr10 manual_curation gene 25811253 25820368 . - . ID=GSCOCG00033642001;Name=Cc10_g14880 | |
| 50612 chr10 manual_curation mRNA 25811253 25820368 . - . ID=GSCOCT00033642001;Parent=GSCOCG00033642001;Name=Cc10_g14880 | |
| 50613 chr10 manual_curation polypeptide 25811424 25820308 . - . ID=GSCOCP00033642001;Derives_from=GSCOCT00033642001;Name=Cc10_g14880;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033642001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(675212..675310%2C675117..675157%2C668914..668989%2C668484..668812%2C668130..668405%2C666864..667045%2C666629..666768%2C666426..666530));owner=coffea | |
| 50614 chr10 manual_curation exon 25811253 25811528 . - . Parent=GSCOCT00033642001 | |
| 50615 chr10 manual_curation exon 25811627 25811766 . - . Parent=GSCOCT00033642001 | |
| 50616 chr10 manual_curation exon 25811862 25812043 . - . Parent=GSCOCT00033642001 | |
| 50617 chr10 manual_curation exon 25813128 25813403 . - . Parent=GSCOCT00033642001 | |
| 50618 chr10 manual_curation exon 25813482 25813810 . - . Parent=GSCOCT00033642001 | |
| 50619 chr10 manual_curation exon 25813912 25813987 . - . Parent=GSCOCT00033642001 | |
| 50620 chr10 manual_curation exon 25820115 25820155 . - . Parent=GSCOCT00033642001 | |
| 50621 chr10 manual_curation exon 25820210 25820368 . - . Parent=GSCOCT00033642001 | |
| 50622 chr10 manual_curation CDS 25811424 25811528 . - 0 Parent=GSCOCT00033642001 | |
| 50623 chr10 manual_curation CDS 25811627 25811766 . - 1 Parent=GSCOCT00033642001 | |
| 50624 chr10 manual_curation CDS 25811862 25812043 . - 2 Parent=GSCOCT00033642001 | |
| 50625 chr10 manual_curation CDS 25813128 25813403 . - 2 Parent=GSCOCT00033642001 | |
| 50626 chr10 manual_curation CDS 25813482 25813810 . - 0 Parent=GSCOCT00033642001 | |
| 50627 chr10 manual_curation CDS 25813912 25813987 . - 2 Parent=GSCOCT00033642001 | |
| 50628 chr10 manual_curation CDS 25820115 25820155 . - 0 Parent=GSCOCT00033642001 | |
| 50629 chr10 manual_curation CDS 25820210 25820308 . - 0 Parent=GSCOCT00033642001 | |
| 50630 chr10 manual_curation gene 25824651 25825481 . - . ID=GSCOCG00033644001;Name=Cc10_g14890 | |
| 50631 chr10 manual_curation mRNA 25824651 25825481 . - . ID=GSCOCT00033644001;Parent=GSCOCG00033644001;Name=Cc10_g14890 | |
| 50632 chr10 manual_curation polypeptide 25824651 25825481 . - . ID=GSCOCP00033644001;Dbxref=InterPro:IPR008985,InterPro:IPR014895,PFAM:PF08787,SUPERFAMILY:SSF49899,SwissProt:Q39962,TrEMBL:B9GTH7,TrEMBL:B9H7T0,TrEMBL:F6GY44;Derives_from=GSCOCT00033644001;Name=Cc10_g14890;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Citrate-binding protein,CC_functional_completeness:fragment,CC_gene:CBP;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033644001~ Citrate-binding protein~ CBP~ fragment;original_location=complement(join(680400..680483%2C680208..680276%2C679653..680036));owner=coffea | |
| 50633 chr10 manual_curation exon 25824651 25825034 . - . Parent=GSCOCT00033644001 | |
| 50634 chr10 manual_curation exon 25825206 25825274 . - . Parent=GSCOCT00033644001 | |
| 50635 chr10 manual_curation exon 25825398 25825481 . - . Parent=GSCOCT00033644001 | |
| 50636 chr10 manual_curation CDS 25824651 25825034 . - 0 Parent=GSCOCT00033644001 | |
| 50637 chr10 manual_curation CDS 25825206 25825274 . - 0 Parent=GSCOCT00033644001 | |
| 50638 chr10 manual_curation CDS 25825398 25825481 . - 0 Parent=GSCOCT00033644001 | |
| 50639 chr10 manual_curation gene 25833738 25837175 . + . ID=GSCOCG00033645001;Name=Cc10_g14900 | |
| 50640 chr10 manual_curation mRNA 25833738 25837175 . + . ID=GSCOCT00033645001;Parent=GSCOCG00033645001;Name=Cc10_g14900 | |
| 50641 chr10 manual_curation polypeptide 25834074 25837175 . + . ID=GSCOCP00033645001;Dbxref=TAIR:AT1G43580.1,TrEMBL:B9SE75,TrEMBL:D7SRD6,TrEMBL:Q7X8A2;Derives_from=GSCOCT00033645001;Name=Cc10_g14900;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Sphingomyelin synthetase family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033645001~ Sphingomyelin synthetase family protein~ unknown_gene~ complete;original_location=join(689076..689149%2C690642..691036%2C691484..691680%2C691782..692177);owner=coffea | |
| 50642 chr10 manual_curation exon 25833738 25834147 . + . Parent=GSCOCT00033645001 | |
| 50643 chr10 manual_curation exon 25835640 25836034 . + . Parent=GSCOCT00033645001 | |
| 50644 chr10 manual_curation exon 25836482 25836678 . + . Parent=GSCOCT00033645001 | |
| 50645 chr10 manual_curation exon 25836780 25837175 . + . Parent=GSCOCT00033645001 | |
| 50646 chr10 manual_curation CDS 25834074 25834147 . + 0 Parent=GSCOCT00033645001 | |
| 50647 chr10 manual_curation CDS 25835640 25836034 . + 2 Parent=GSCOCT00033645001 | |
| 50648 chr10 manual_curation CDS 25836482 25836678 . + 1 Parent=GSCOCT00033645001 | |
| 50649 chr10 manual_curation CDS 25836780 25837175 . + 0 Parent=GSCOCT00033645001 | |
| 50650 chr10 manual_curation gene 25837232 25841728 . + . ID=GSCOCG00033646001;Name=Cc10_g14910 | |
| 50651 chr10 manual_curation mRNA 25837232 25841728 . + . ID=GSCOCT00033646001;Parent=GSCOCG00033646001;Name=Cc10_g14910 | |
| 50652 chr10 manual_curation polypeptide 25838483 25841234 . + . ID=GSCOCP00033646001;Dbxref=SwissProt:Q6NPG7,TAIR:AT5G43822.1,TrEMBL:B9H5J6,TrEMBL:D7UDC1,TrEMBL:G7JN62;Derives_from=GSCOCT00033646001;Name=Cc10_g14910;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterized protein At5g43822,CC_functional_completeness:complete,CC_gene:At5g43822;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033646001~ Uncharacterized protein At5g43822~ At5g43822~ complete;original_location=join(693485..693616%2C693718..693836%2C694314..694493%2C695039..695095%2C695908..695975%2C696193..696236);owner=coffea | |
| 50653 chr10 manual_curation exon 25837232 25838614 . + . Parent=GSCOCT00033646001 | |
| 50654 chr10 manual_curation exon 25838716 25838834 . + . Parent=GSCOCT00033646001 | |
| 50655 chr10 manual_curation exon 25839312 25839491 . + . Parent=GSCOCT00033646001 | |
| 50656 chr10 manual_curation exon 25840037 25840093 . + . Parent=GSCOCT00033646001 | |
| 50657 chr10 manual_curation exon 25840906 25840973 . + . Parent=GSCOCT00033646001 | |
| 50658 chr10 manual_curation exon 25841191 25841728 . + . Parent=GSCOCT00033646001 | |
| 50659 chr10 manual_curation CDS 25838483 25838614 . + 0 Parent=GSCOCT00033646001 | |
| 50660 chr10 manual_curation CDS 25838716 25838834 . + 0 Parent=GSCOCT00033646001 | |
| 50661 chr10 manual_curation CDS 25839312 25839491 . + 2 Parent=GSCOCT00033646001 | |
| 50662 chr10 manual_curation CDS 25840037 25840093 . + 2 Parent=GSCOCT00033646001 | |
| 50663 chr10 manual_curation CDS 25840906 25840973 . + 2 Parent=GSCOCT00033646001 | |
| 50664 chr10 manual_curation CDS 25841191 25841234 . + 1 Parent=GSCOCT00033646001 | |
| 50665 chr10 manual_curation gene 25843204 25847431 . + . ID=GSCOCG00033647001;Name=Cc10_g14920 | |
| 50666 chr10 manual_curation mRNA 25843204 25847431 . + . ID=GSCOCT00033647001;Parent=GSCOCG00033647001;Name=Cc10_g14920 | |
| 50667 chr10 manual_curation polypeptide 25843340 25846906 . + . ID=GSCOCP00033647001;Dbxref=GENE3D:G3DSA:3.40.30.10,InterPro:IPR005746,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR013766,InterPro:IPR017936,InterPro:IPR017937,PANTHER:PTHR10438,PFAM:PF00085,PRINTS:PR00421,PROFILE:PS51352,PROSITE:PS00194,SUPERFAMILY:SSF52833,SwissProt:Q5JMR9,SwissProt:Q6NPF9,SwissProt:Q8L7S9,TAIR:AT1G43560.1,TAIR:AT1G50320.1,TAIR:AT1G76760.1,TIGRFAMs:TIGR01068,TrEMBL:A9PGA7,TrEMBL:B9SE76,TrEMBL:D7SRD7;Derives_from=GSCOCT00033647001;Name=Cc10_g14920;Ontology_term=CC_evidence_code:ISS,GO:0006662,GO:0009055,GO:0015035,GO:0045454,CC_EC_number:5.3.4.1,PRODUCT:Thioredoxin Y1%2C chloroplastic,CC_functional_completeness:complete,CC_gene:At1g76760,CC_gene:At1g43560,CC_gene:Os01g0963400;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033647001~ Thioredoxin Y1%2C chloroplastic~ At1g76760~ complete;original_location=join(698342..698530%2C700719..700807%2C701205..701382%2C701843..701908);owner=coffea | |
| 50668 chr10 manual_curation exon 25843204 25843528 . + . Parent=GSCOCT00033647001 | |
| 50669 chr10 manual_curation exon 25845717 25845805 . + . Parent=GSCOCT00033647001 | |
| 50670 chr10 manual_curation exon 25846203 25846380 . + . Parent=GSCOCT00033647001 | |
| 50671 chr10 manual_curation exon 25846841 25847431 . + . Parent=GSCOCT00033647001 | |
| 50672 chr10 manual_curation CDS 25843340 25843528 . + 0 Parent=GSCOCT00033647001 | |
| 50673 chr10 manual_curation CDS 25845717 25845805 . + 0 Parent=GSCOCT00033647001 | |
| 50674 chr10 manual_curation CDS 25846203 25846380 . + 2 Parent=GSCOCT00033647001 | |
| 50675 chr10 manual_curation CDS 25846841 25846906 . + 0 Parent=GSCOCT00033647001 | |
| 50676 chr10 manual_curation gene 25847667 25851091 . + . ID=GSCOCG00033648001;Name=Cc10_g14930 | |
| 50677 chr10 manual_curation mRNA 25847667 25851091 . + . ID=GSCOCT00033648001;Parent=GSCOCG00033648001;Name=Cc10_g14930 | |
| 50678 chr10 manual_curation polypeptide 25847720 25849978 . + . ID=GSCOCP00033648001;Dbxref=InterPro:IPR001214,PFAM:PF00856,PROFILE:PS50280,SwissProt:Q3ECY6,TAIR:AT1G43245.1,TrEMBL:B9H7T3,TrEMBL:D7KMW7,TrEMBL:I1MP64;Derives_from=GSCOCT00033648001;Name=Cc10_g14930;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein SET DOMAIN GROUP 41,CC_functional_completeness:fragment,CC_gene:SDG41;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033648001~ Putative Protein SET DOMAIN GROUP 41~ SDG41~ fragment;original_location=join(702722..703460%2C703576..703676%2C704404..704502%2C704927..704980);owner=coffea | |
| 50679 chr10 manual_curation exon 25847667 25848458 . + . Parent=GSCOCT00033648001 | |
| 50680 chr10 manual_curation exon 25848574 25848674 . + . Parent=GSCOCT00033648001 | |
| 50681 chr10 manual_curation exon 25849402 25849500 . + . Parent=GSCOCT00033648001 | |
| 50682 chr10 manual_curation exon 25849925 25851091 . + . Parent=GSCOCT00033648001 | |
| 50683 chr10 manual_curation CDS 25847720 25848458 . + 0 Parent=GSCOCT00033648001 | |
| 50684 chr10 manual_curation CDS 25848574 25848674 . + 1 Parent=GSCOCT00033648001 | |
| 50685 chr10 manual_curation CDS 25849402 25849500 . + 0 Parent=GSCOCT00033648001 | |
| 50686 chr10 manual_curation CDS 25849925 25849978 . + 0 Parent=GSCOCT00033648001 | |
| 50687 chr10 manual_curation gene 25857396 25859077 . + . ID=GSCOCG00033650001;Name=Cc10_g14940 | |
| 50688 chr10 manual_curation mRNA 25857396 25859077 . + . ID=GSCOCT00033650001;Parent=GSCOCG00033650001;Name=Cc10_g14940 | |
| 50689 chr10 manual_curation polypeptide 25857574 25858361 . + . ID=GSCOCP00033650001;Dbxref=InterPro:IPR003496,PFAM:PF02496,SwissProt:P37219,SwissProt:P37220,SwissProt:Q08655,TrEMBL:B6RQ66,TrEMBL:C9DFB0,TrEMBL:Q7XYV5;Derives_from=GSCOCT00033650001;Name=Cc10_g14940;Ontology_term=CC_evidence_code:ISS,GO:0006950,CC_EC_number:missing_EC_number,PRODUCT:Abscisic stress-ripening protein 3,CC_functional_completeness:complete,CC_gene:ASR2,CC_gene:ASR1,CC_gene:ASR3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033650001~ Abscisic stress-ripening protein 3~ ASR2~ complete;original_location=join(712576..712641%2C712687..712779%2C713181..713363);owner=coffea | |
| 50690 chr10 manual_curation exon 25857396 25857639 . + . Parent=GSCOCT00033650001 | |
| 50691 chr10 manual_curation exon 25857685 25857777 . + . Parent=GSCOCT00033650001 | |
| 50692 chr10 manual_curation exon 25858179 25859077 . + . Parent=GSCOCT00033650001 | |
| 50693 chr10 manual_curation CDS 25857574 25857639 . + 0 Parent=GSCOCT00033650001 | |
| 50694 chr10 manual_curation CDS 25857685 25857777 . + 0 Parent=GSCOCT00033650001 | |
| 50695 chr10 manual_curation CDS 25858179 25858361 . + 0 Parent=GSCOCT00033650001 | |
| 50696 chr10 manual_curation gene 25872344 25876113 . + . ID=GSCOCG00033653001;Name=Cc10_g14950 | |
| 50697 chr10 manual_curation mRNA 25872344 25876113 . + . ID=GSCOCT00033653001;Parent=GSCOCG00033653001;Name=Cc10_g14950 | |
| 50698 chr10 manual_curation polypeptide 25872344 25876113 . + . ID=GSCOCP00033653001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017441,InterPro:IPR020635,PFAM:PF00560,PFAM:PF07714,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:C0LGP4,SwissProt:C0LGT6,SwissProt:Q9SD62,TAIR:AT3G47090.1,TAIR:AT3G47570.1,TAIR:AT3G47580.1,TrEMBL:B9IHK8,TrEMBL:B9SM56,TrEMBL:B9SWC8;Derives_from=GSCOCT00033653001;Name=Cc10_g14950;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570,CC_functional_completeness:complete,CC_gene:At3g47570,CC_gene:EFR,CC_gene:At3g47110;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033653001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570~ At3g47570~ complete;original_location=join(727346..727901%2C728189..728260%2C728651..730654%2C730760..731115);owner=coffea | |
| 50699 chr10 manual_curation exon 25872344 25872899 . + . Parent=GSCOCT00033653001 | |
| 50700 chr10 manual_curation exon 25873187 25873258 . + . Parent=GSCOCT00033653001 | |
| 50701 chr10 manual_curation exon 25873649 25875652 . + . Parent=GSCOCT00033653001 | |
| 50702 chr10 manual_curation exon 25875758 25876113 . + . Parent=GSCOCT00033653001 | |
| 50703 chr10 manual_curation CDS 25872344 25872899 . + 0 Parent=GSCOCT00033653001 | |
| 50704 chr10 manual_curation CDS 25873187 25873258 . + 1 Parent=GSCOCT00033653001 | |
| 50705 chr10 manual_curation CDS 25873649 25875652 . + 1 Parent=GSCOCT00033653001 | |
| 50706 chr10 manual_curation CDS 25875758 25876113 . + 1 Parent=GSCOCT00033653001 | |
| 50707 chr10 manual_curation gene 25883216 25885114 . + . ID=GSCOCG00033655001;Name=Cc10_g14960 | |
| 50708 chr10 manual_curation mRNA 25883216 25885114 . + . ID=GSCOCT00033655001;Parent=GSCOCG00033655001;Name=Cc10_g14960 | |
| 50709 chr10 manual_curation polypeptide 25883570 25884806 . + . ID=GSCOCP00033655001;Dbxref=InterPro:IPR003496,PFAM:PF02496,SwissProt:P37219,SwissProt:P37220,SwissProt:Q08655,TrEMBL:D2JX38,TrEMBL:D2JX50,TrEMBL:Q7XYV5;Derives_from=GSCOCT00033655001;Name=Cc10_g14960;Ontology_term=CC_evidence_code:ISS,GO:0006950,CC_EC_number:missing_EC_number,PRODUCT:Abscisic stress-ripening protein 3,CC_functional_completeness:complete,CC_gene:ASR2,CC_gene:ASR1,CC_gene:ASR3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033655001~ Abscisic stress-ripening protein 3~ ASR2~ complete;original_location=join(738572..738748%2C739626..739808);owner=coffea | |
| 50710 chr10 manual_curation exon 25883216 25883746 . + . Parent=GSCOCT00033655001 | |
| 50711 chr10 manual_curation exon 25884624 25885114 . + . Parent=GSCOCT00033655001 | |
| 50712 chr10 manual_curation CDS 25883570 25883746 . + 0 Parent=GSCOCT00033655001 | |
| 50713 chr10 manual_curation CDS 25884624 25884806 . + 0 Parent=GSCOCT00033655001 | |
| 50714 chr10 manual_curation gene 25905726 25907273 . + . ID=GSCOCG00033656001;Name=Cc10_g14970 | |
| 50715 chr10 manual_curation mRNA 25905726 25907273 . + . ID=GSCOCT00033656001;Parent=GSCOCG00033656001;Name=Cc10_g14970 | |
| 50716 chr10 manual_curation polypeptide 25906036 25906859 . + . ID=GSCOCP00033656001;Derives_from=GSCOCT00033656001;Name=Cc10_g14970;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033656001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(761038..761156%2C761233..761517%2C761807..761861);owner=coffea | |
| 50717 chr10 manual_curation exon 25905726 25906154 . + . Parent=GSCOCT00033656001 | |
| 50718 chr10 manual_curation exon 25906231 25906515 . + . Parent=GSCOCT00033656001 | |
| 50719 chr10 manual_curation exon 25906805 25907273 . + . Parent=GSCOCT00033656001 | |
| 50720 chr10 manual_curation CDS 25906036 25906154 . + 0 Parent=GSCOCT00033656001 | |
| 50721 chr10 manual_curation CDS 25906231 25906515 . + 2 Parent=GSCOCT00033656001 | |
| 50722 chr10 manual_curation CDS 25906805 25906859 . + 2 Parent=GSCOCT00033656001 | |
| 50723 chr10 manual_curation gene 25973648 25978071 . + . ID=GSCOCG00033659001;Name=Cc10_g14980 | |
| 50724 chr10 manual_curation mRNA 25973648 25978071 . + . ID=GSCOCT00033659001;Parent=GSCOCG00033659001;Name=Cc10_g14980 | |
| 50725 chr10 manual_curation polypeptide 25973648 25978071 . + . ID=GSCOCP00033659001;Dbxref=InterPro:IPR000719,InterPro:IPR000953,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008266,InterPro:IPR011009,InterPro:IPR012337,InterPro:IPR016197,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00385,PFAM:PF00560,PROFILE:PS50011,PROFILE:PS50013,PROSITE:PS00109,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF53098,SUPERFAMILY:SSF54160,SUPERFAMILY:SSF56112,SwissProt:Q8VZG8,SwissProt:Q9LP24,SwissProt:Q9SHI2,TAIR:AT1G17230.1,TAIR:AT1G35710.1,TAIR:AT4G08850.1,TrEMBL:F6HYL7,TrEMBL:G7ICI1,TrEMBL:I1MLQ2;Derives_from=GSCOCT00033659001;Name=Cc10_g14980;Ontology_term=CC_evidence_code:ISS,GO:0000785,GO:0003676,GO:0003682,GO:0004672,GO:0004674,GO:0004713,GO:0005515,GO:0005524,GO:0005634,GO:0006333,GO:0006468,CC_EC_number:2.7.11.25,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At4g08850,CC_functional_completeness:complete,CC_gene:At4g08850,CC_gene:At1g35710,CC_gene:At1g17230;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033659001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At4g08850~ At4g08850~ complete;original_location=join(828650..828756%2C829105..829791%2C829873..829978%2C830361..831041%2C831414..831867%2C832024..832074%2C832135..832785%2C832967..833073);owner=coffea | |
| 50726 chr10 manual_curation exon 25973648 25973754 . + . Parent=GSCOCT00033659001 | |
| 50727 chr10 manual_curation exon 25974103 25974789 . + . Parent=GSCOCT00033659001 | |
| 50728 chr10 manual_curation exon 25974871 25974976 . + . Parent=GSCOCT00033659001 | |
| 50729 chr10 manual_curation exon 25975359 25976039 . + . Parent=GSCOCT00033659001 | |
| 50730 chr10 manual_curation exon 25976412 25976865 . + . Parent=GSCOCT00033659001 | |
| 50731 chr10 manual_curation exon 25977022 25977072 . + . Parent=GSCOCT00033659001 | |
| 50732 chr10 manual_curation exon 25977133 25977783 . + . Parent=GSCOCT00033659001 | |
| 50733 chr10 manual_curation exon 25977965 25978071 . + . Parent=GSCOCT00033659001 | |
| 50734 chr10 manual_curation CDS 25973648 25973754 . + 0 Parent=GSCOCT00033659001 | |
| 50735 chr10 manual_curation CDS 25974103 25974789 . + 2 Parent=GSCOCT00033659001 | |
| 50736 chr10 manual_curation CDS 25974871 25974976 . + 2 Parent=GSCOCT00033659001 | |
| 50737 chr10 manual_curation CDS 25975359 25976039 . + 0 Parent=GSCOCT00033659001 | |
| 50738 chr10 manual_curation CDS 25976412 25976865 . + 0 Parent=GSCOCT00033659001 | |
| 50739 chr10 manual_curation CDS 25977022 25977072 . + 1 Parent=GSCOCT00033659001 | |
| 50740 chr10 manual_curation CDS 25977133 25977783 . + 1 Parent=GSCOCT00033659001 | |
| 50741 chr10 manual_curation CDS 25977965 25978071 . + 1 Parent=GSCOCT00033659001 | |
| 50742 chr10 manual_curation gene 25986807 25990458 . + . ID=GSCOCG00033660001;Name=Cc10_g14990 | |
| 50743 chr10 manual_curation mRNA 25986807 25990458 . + . ID=GSCOCT00033660001;Parent=GSCOCG00033660001;Name=Cc10_g14990 | |
| 50744 chr10 manual_curation polypeptide 25986807 25990458 . + . ID=GSCOCP00033660001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008266,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00109,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:Q8VZG8,SwissProt:Q9LP24,SwissProt:Q9SHI2,TAIR:AT1G17230.1,TAIR:AT1G35710.1,TAIR:AT4G08850.1,TrEMBL:A5AR60,TrEMBL:B9NDR4,TrEMBL:G7K7I9;Derives_from=GSCOCT00033660001;Name=Cc10_g14990;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0004713,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At4g08850,CC_functional_completeness:complete,CC_gene:At4g08850,CC_gene:At1g35710,CC_gene:At1g17230;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033660001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At4g08850~ At4g08850~ complete;original_location=join(841809..842709%2C843217..843768%2C843949..844635%2C845090..845460);owner=coffea | |
| 50745 chr10 manual_curation exon 25986807 25987707 . + . Parent=GSCOCT00033660001 | |
| 50746 chr10 manual_curation exon 25988215 25988766 . + . Parent=GSCOCT00033660001 | |
| 50747 chr10 manual_curation exon 25988947 25989633 . + . Parent=GSCOCT00033660001 | |
| 50748 chr10 manual_curation exon 25990088 25990458 . + . Parent=GSCOCT00033660001 | |
| 50749 chr10 manual_curation CDS 25986807 25987707 . + 0 Parent=GSCOCT00033660001 | |
| 50750 chr10 manual_curation CDS 25988215 25988766 . + 1 Parent=GSCOCT00033660001 | |
| 50751 chr10 manual_curation CDS 25988947 25989633 . + 1 Parent=GSCOCT00033660001 | |
| 50752 chr10 manual_curation CDS 25990088 25990458 . + 1 Parent=GSCOCT00033660001 | |
| 50753 chr10 manual_curation gene 25999595 26002732 . + . ID=GSCOCG00033662001;Name=Cc10_g15000 | |
| 50754 chr10 manual_curation mRNA 25999595 26002732 . + . ID=GSCOCT00033662001;Parent=GSCOCG00033662001;Name=Cc10_g15000 | |
| 50755 chr10 manual_curation polypeptide 25999595 26002732 . + . ID=GSCOCP00033662001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008266,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00109,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:Q8VZG8,SwissProt:Q9LP24,SwissProt:Q9LVP0,TAIR:AT1G35710.1,TAIR:AT4G08850.1,TAIR:AT5G63930.1,TrEMBL:A5AR60,TrEMBL:B9NDR4,TrEMBL:B9NDR5;Derives_from=GSCOCT00033662001;Name=Cc10_g15000;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0004713,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At4g08850,CC_functional_completeness:complete,CC_gene:At4g08850,CC_gene:At1g35710,CC_gene:At5g63930;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033662001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At4g08850~ At4g08850~ complete;original_location=join(854597..855011%2C855366..857291%2C857364..857734);owner=coffea | |
| 50756 chr10 manual_curation exon 25999595 26000009 . + . Parent=GSCOCT00033662001 | |
| 50757 chr10 manual_curation exon 26000364 26002289 . + . Parent=GSCOCT00033662001 | |
| 50758 chr10 manual_curation exon 26002362 26002732 . + . Parent=GSCOCT00033662001 | |
| 50759 chr10 manual_curation CDS 25999595 26000009 . + 0 Parent=GSCOCT00033662001 | |
| 50760 chr10 manual_curation CDS 26000364 26002289 . + 1 Parent=GSCOCT00033662001 | |
| 50761 chr10 manual_curation CDS 26002362 26002732 . + 1 Parent=GSCOCT00033662001 | |
| 50762 chr10 manual_curation gene 26025967 26034297 . + . ID=GSCOCG00033663001;Name=Cc10_g15010 | |
| 50763 chr10 manual_curation mRNA 26025967 26034297 . + . ID=GSCOCT00033663001;Parent=GSCOCG00033663001;Name=Cc10_g15010 | |
| 50764 chr10 manual_curation polypeptide 26026720 26033753 . + . ID=GSCOCP00033663001;Dbxref=InterPro:IPR001841,InterPro:IPR005150,PFAM:PF03552,PROFILE:PS50089,SwissProt:Q8L778,SwissProt:Q94JQ6,SwissProt:Q9SJ22,TAIR:AT2G21770.1,TAIR:AT5G09870.1,TAIR:AT5G64740.1,TrEMBL:B9GTH4,TrEMBL:B9H7U0,TrEMBL:Q93XQ1;Derives_from=GSCOCT00033663001;Name=Cc10_g15010;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,GO:0016020,GO:0016760,GO:0030244,CC_EC_number:2.4.1.12,PRODUCT:Probable cellulose synthase A catalytic subunit 9 [UDP-forming],CC_functional_completeness:complete,CC_gene:CESA9,CC_gene:CESA6,CC_gene:CESA5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033663001~ Probable cellulose synthase A catalytic subunit 9 [UDP-forming]~ CESA9~ complete;original_location=join(881722..881802%2C882343..882538%2C882651..882883%2C882982..883084%2C883174..883360%2C885136..885402%2C885715..886060%2C886198..886335%2C886429..886554%2C886650..886862%2C886997..887267%2C887417..887613%2C887710..888060%2C888174..888755);owner=coffea | |
| 50765 chr10 manual_curation exon 26025967 26026800 . + . Parent=GSCOCT00033663001 | |
| 50766 chr10 manual_curation exon 26027341 26027536 . + . Parent=GSCOCT00033663001 | |
| 50767 chr10 manual_curation exon 26027649 26027881 . + . Parent=GSCOCT00033663001 | |
| 50768 chr10 manual_curation exon 26027980 26028082 . + . Parent=GSCOCT00033663001 | |
| 50769 chr10 manual_curation exon 26028172 26028358 . + . Parent=GSCOCT00033663001 | |
| 50770 chr10 manual_curation exon 26030134 26030400 . + . Parent=GSCOCT00033663001 | |
| 50771 chr10 manual_curation exon 26030713 26031058 . + . Parent=GSCOCT00033663001 | |
| 50772 chr10 manual_curation exon 26031196 26031333 . + . Parent=GSCOCT00033663001 | |
| 50773 chr10 manual_curation exon 26031427 26031552 . + . Parent=GSCOCT00033663001 | |
| 50774 chr10 manual_curation exon 26031648 26031860 . + . Parent=GSCOCT00033663001 | |
| 50775 chr10 manual_curation exon 26031995 26032265 . + . Parent=GSCOCT00033663001 | |
| 50776 chr10 manual_curation exon 26032415 26032611 . + . Parent=GSCOCT00033663001 | |
| 50777 chr10 manual_curation exon 26032708 26033058 . + . Parent=GSCOCT00033663001 | |
| 50778 chr10 manual_curation exon 26033172 26034297 . + . Parent=GSCOCT00033663001 | |
| 50779 chr10 manual_curation CDS 26026720 26026800 . + 0 Parent=GSCOCT00033663001 | |
| 50780 chr10 manual_curation CDS 26027341 26027536 . + 0 Parent=GSCOCT00033663001 | |
| 50781 chr10 manual_curation CDS 26027649 26027881 . + 1 Parent=GSCOCT00033663001 | |
| 50782 chr10 manual_curation CDS 26027980 26028082 . + 0 Parent=GSCOCT00033663001 | |
| 50783 chr10 manual_curation CDS 26028172 26028358 . + 1 Parent=GSCOCT00033663001 | |
| 50784 chr10 manual_curation CDS 26030134 26030400 . + 2 Parent=GSCOCT00033663001 | |
| 50785 chr10 manual_curation CDS 26030713 26031058 . + 2 Parent=GSCOCT00033663001 | |
| 50786 chr10 manual_curation CDS 26031196 26031333 . + 0 Parent=GSCOCT00033663001 | |
| 50787 chr10 manual_curation CDS 26031427 26031552 . + 0 Parent=GSCOCT00033663001 | |
| 50788 chr10 manual_curation CDS 26031648 26031860 . + 0 Parent=GSCOCT00033663001 | |
| 50789 chr10 manual_curation CDS 26031995 26032265 . + 0 Parent=GSCOCT00033663001 | |
| 50790 chr10 manual_curation CDS 26032415 26032611 . + 1 Parent=GSCOCT00033663001 | |
| 50791 chr10 manual_curation CDS 26032708 26033058 . + 0 Parent=GSCOCT00033663001 | |
| 50792 chr10 manual_curation CDS 26033172 26033753 . + 0 Parent=GSCOCT00033663001 | |
| 50793 chr10 manual_curation gene 26034505 26037663 . - . ID=GSCOCG00033664001;Name=Cc10_g15020 | |
| 50794 chr10 manual_curation mRNA 26034505 26037663 . - . ID=GSCOCT00033664001;Parent=GSCOCG00033664001;Name=Cc10_g15020 | |
| 50795 chr10 manual_curation polypeptide 26034843 26037663 . - . ID=GSCOCP00033664001;Derives_from=GSCOCT00033664001;Name=Cc10_g15020;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033664001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(892104..892665%2C891927..892007%2C891668..891847%2C891438..891581%2C891109..891360%2C890211..890756%2C889845..890131));owner=coffea | |
| 50796 chr10 manual_curation exon 26034505 26035129 . - . Parent=GSCOCT00033664001 | |
| 50797 chr10 manual_curation exon 26035209 26035754 . - . Parent=GSCOCT00033664001 | |
| 50798 chr10 manual_curation exon 26036107 26036358 . - . Parent=GSCOCT00033664001 | |
| 50799 chr10 manual_curation exon 26036436 26036579 . - . Parent=GSCOCT00033664001 | |
| 50800 chr10 manual_curation exon 26036666 26036845 . - . Parent=GSCOCT00033664001 | |
| 50801 chr10 manual_curation exon 26036925 26037005 . - . Parent=GSCOCT00033664001 | |
| 50802 chr10 manual_curation exon 26037102 26037663 . - . Parent=GSCOCT00033664001 | |
| 50803 chr10 manual_curation CDS 26034843 26035129 . - 1 Parent=GSCOCT00033664001 | |
| 50804 chr10 manual_curation CDS 26035209 26035754 . - 1 Parent=GSCOCT00033664001 | |
| 50805 chr10 manual_curation CDS 26036107 26036358 . - 1 Parent=GSCOCT00033664001 | |
| 50806 chr10 manual_curation CDS 26036436 26036579 . - 1 Parent=GSCOCT00033664001 | |
| 50807 chr10 manual_curation CDS 26036666 26036845 . - 1 Parent=GSCOCT00033664001 | |
| 50808 chr10 manual_curation CDS 26036925 26037005 . - 1 Parent=GSCOCT00033664001 | |
| 50809 chr10 manual_curation CDS 26037102 26037663 . - 0 Parent=GSCOCT00033664001 | |
| 50810 chr10 manual_curation gene 26040114 26041783 . - . ID=GSCOCG00033666001;Name=Cc10_g15030 | |
| 50811 chr10 manual_curation mRNA 26040114 26041783 . - . ID=GSCOCT00033666001;Parent=GSCOCG00033666001;Name=Cc10_g15030 | |
| 50812 chr10 manual_curation polypeptide 26040114 26041719 . - . ID=GSCOCP00033666001;Derives_from=GSCOCT00033666001;Name=Cc10_g15030;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033666001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(896451..896721%2C896255..896335%2C895835..896104%2C895116..895570));owner=coffea | |
| 50813 chr10 manual_curation exon 26040114 26040568 . - . Parent=GSCOCT00033666001 | |
| 50814 chr10 manual_curation exon 26040833 26041102 . - . Parent=GSCOCT00033666001 | |
| 50815 chr10 manual_curation exon 26041253 26041333 . - . Parent=GSCOCT00033666001 | |
| 50816 chr10 manual_curation exon 26041449 26041783 . - . Parent=GSCOCT00033666001 | |
| 50817 chr10 manual_curation CDS 26040114 26040568 . - 1 Parent=GSCOCT00033666001 | |
| 50818 chr10 manual_curation CDS 26040833 26041102 . - 1 Parent=GSCOCT00033666001 | |
| 50819 chr10 manual_curation CDS 26041253 26041333 . - 1 Parent=GSCOCT00033666001 | |
| 50820 chr10 manual_curation CDS 26041449 26041719 . - 0 Parent=GSCOCT00033666001 | |
| 50821 chr10 manual_curation gene 26042234 26044275 . - . ID=GSCOCG00033667001;Name=Cc10_g15040 | |
| 50822 chr10 manual_curation mRNA 26042234 26044275 . - . ID=GSCOCT00033667001;Parent=GSCOCG00033667001;Name=Cc10_g15040 | |
| 50823 chr10 manual_curation polypeptide 26042234 26044153 . - . ID=GSCOCP00033667001;Dbxref=TAIR:AT1G76740.1,TrEMBL:B9H7U1,TrEMBL:D7KTW6,TrEMBL:Q9SRD9;Derives_from=GSCOCT00033667001;Name=Cc10_g15040;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033667001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(899042..899155%2C897236..898804));owner=coffea | |
| 50824 chr10 manual_curation exon 26044243 26044275 . - . Parent=GSCOCT00033667001 | |
| 50825 chr10 manual_curation exon 26042234 26043802 . - . Parent=GSCOCT00033667001 | |
| 50826 chr10 manual_curation exon 26044040 26044155 . - . Parent=GSCOCT00033667001 | |
| 50827 chr10 manual_curation CDS 26042234 26043802 . - 0 Parent=GSCOCT00033667001 | |
| 50828 chr10 manual_curation CDS 26044040 26044153 . - 0 Parent=GSCOCT00033667001 | |
| 50829 chr10 manual_curation gene 26044883 26046610 . + . ID=GSCOCG00033668001;Name=Cc10_g15050 | |
| 50830 chr10 manual_curation mRNA 26044883 26046610 . + . ID=GSCOCT00033668001;Parent=GSCOCG00033668001;Name=Cc10_g15050 | |
| 50831 chr10 manual_curation polypeptide 26045236 26045439 . + . ID=GSCOCP00033668001;Derives_from=GSCOCT00033668001;Name=Cc10_g15050;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033668001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=900238..900441;owner=coffea | |
| 50832 chr10 manual_curation exon 26044883 26046610 . + . Parent=GSCOCT00033668001 | |
| 50833 chr10 manual_curation CDS 26045236 26045439 . + 0 Parent=GSCOCT00033668001 | |
| 50834 chr10 manual_curation gene 26047175 26050659 . - . ID=GSCOCG00033669001;Name=Cc10_g15060 | |
| 50835 chr10 manual_curation mRNA 26047175 26050659 . - . ID=GSCOCT00033669001;Parent=GSCOCG00033669001;Name=Cc10_g15060 | |
| 50836 chr10 manual_curation polypeptide 26047175 26050659 . - . ID=GSCOCP00033669001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR008266,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00109,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q8VZG8,SwissProt:Q9LP24,SwissProt:Q9SHI2,TAIR:AT1G17230.1,TAIR:AT1G35710.1,TAIR:AT4G08850.1,TrEMBL:B9ICP8,TrEMBL:B9ICQ4,TrEMBL:G7IBH4;Derives_from=GSCOCT00033669001;Name=Cc10_g15060;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0004713,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At4g08850,CC_functional_completeness:complete,CC_gene:At4g08850,CC_gene:At1g35710,CC_gene:At1g17230;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033669001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At4g08850~ At4g08850~ complete;original_location=complement(join(905142..905661%2C904725..905069%2C904250..904370%2C903060..903970%2C902177..902544));owner=coffea | |
| 50837 chr10 manual_curation exon 26047175 26047542 . - . Parent=GSCOCT00033669001 | |
| 50838 chr10 manual_curation exon 26048058 26048968 . - . Parent=GSCOCT00033669001 | |
| 50839 chr10 manual_curation exon 26049248 26049368 . - . Parent=GSCOCT00033669001 | |
| 50840 chr10 manual_curation exon 26049723 26050067 . - . Parent=GSCOCT00033669001 | |
| 50841 chr10 manual_curation exon 26050140 26050659 . - . Parent=GSCOCT00033669001 | |
| 50842 chr10 manual_curation CDS 26047175 26047542 . - 1 Parent=GSCOCT00033669001 | |
| 50843 chr10 manual_curation CDS 26048058 26048968 . - 2 Parent=GSCOCT00033669001 | |
| 50844 chr10 manual_curation CDS 26049248 26049368 . - 1 Parent=GSCOCT00033669001 | |
| 50845 chr10 manual_curation CDS 26049723 26050067 . - 1 Parent=GSCOCT00033669001 | |
| 50846 chr10 manual_curation CDS 26050140 26050659 . - 0 Parent=GSCOCT00033669001 | |
| 50847 chr10 manual_curation gene 26051821 26055886 . + . ID=GSCOCG00033670001;Name=Cc10_g15070 | |
| 50848 chr10 manual_curation mRNA 26051821 26055886 . + . ID=GSCOCT00033670001;Parent=GSCOCG00033670001;Name=Cc10_g15070 | |
| 50849 chr10 manual_curation polypeptide 26051821 26055503 . + . ID=GSCOCP00033670001;Dbxref=GENE3D:G3DSA:3.40.50.10420,InterPro:IPR002698,PFAM:PF01812,SwissProt:Q0P464,SwissProt:Q2KI24,SwissProt:Q2M296,TAIR:AT1G76730.1,TrEMBL:B9SE88,TrEMBL:F6GY50,TrEMBL:Q9SRE0;Derives_from=GSCOCT00033670001;Name=Cc10_g15070;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0009396,GO:0030272,CC_EC_number:missing_EC_number,PRODUCT:NagB/RpiA/CoA transferase-like superfamily protein,CC_functional_completeness:complete,CC_gene:MTHFSD,CC_gene:mthfsd;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033670001~ NagB/RpiA/CoA transferase-like superfamily protein~ MTHFSD~ complete;original_location=join(906823..907227%2C907483..907573%2C908116..908342%2C909199..909274%2C909898..910023%2C910357..910505);owner=coffea | |
| 50850 chr10 manual_curation exon 26051821 26052225 . + . Parent=GSCOCT00033670001 | |
| 50851 chr10 manual_curation exon 26052481 26052571 . + . Parent=GSCOCT00033670001 | |
| 50852 chr10 manual_curation exon 26053114 26053340 . + . Parent=GSCOCT00033670001 | |
| 50853 chr10 manual_curation exon 26054197 26054272 . + . Parent=GSCOCT00033670001 | |
| 50854 chr10 manual_curation exon 26054896 26055021 . + . Parent=GSCOCT00033670001 | |
| 50855 chr10 manual_curation exon 26055355 26055886 . + . Parent=GSCOCT00033670001 | |
| 50856 chr10 manual_curation CDS 26051821 26052225 . + 0 Parent=GSCOCT00033670001 | |
| 50857 chr10 manual_curation CDS 26052481 26052571 . + 0 Parent=GSCOCT00033670001 | |
| 50858 chr10 manual_curation CDS 26053114 26053340 . + 1 Parent=GSCOCT00033670001 | |
| 50859 chr10 manual_curation CDS 26054197 26054272 . + 0 Parent=GSCOCT00033670001 | |
| 50860 chr10 manual_curation CDS 26054896 26055021 . + 1 Parent=GSCOCT00033670001 | |
| 50861 chr10 manual_curation CDS 26055355 26055503 . + 1 Parent=GSCOCT00033670001 | |
| 50862 chr10 manual_curation gene 26056821 26062827 . - . ID=GSCOCG00033671001;Name=Cc10_g15080 | |
| 50863 chr10 manual_curation mRNA 26056821 26062827 . - . ID=GSCOCT00033671001;Parent=GSCOCG00033671001;Name=Cc10_g15080 | |
| 50864 chr10 manual_curation polypeptide 26057260 26062734 . - . ID=GSCOCP00033671001;Dbxref=InterPro:IPR007462,PFAM:PF04367,TAIR:AT1G43130.1,TAIR:AT2G20120.1,TAIR:AT2G20130.1,TrEMBL:A2WXC4,TrEMBL:I1NTQ1,TrEMBL:Q8S1P4;Derives_from=GSCOCT00033671001;Name=Cc10_g15080;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:like COV 2,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033671001~ like COV 2~ unknown_gene~ complete;original_location=complement(join(917608..917736%2C915986..916038%2C915690..915799%2C914360..914527%2C913142..913239%2C912461..912587%2C912262..912362));owner=coffea | |
| 50865 chr10 manual_curation exon 26056821 26057360 . - . Parent=GSCOCT00033671001 | |
| 50866 chr10 manual_curation exon 26057459 26057585 . - . Parent=GSCOCT00033671001 | |
| 50867 chr10 manual_curation exon 26058140 26058237 . - . Parent=GSCOCT00033671001 | |
| 50868 chr10 manual_curation exon 26059358 26059525 . - . Parent=GSCOCT00033671001 | |
| 50869 chr10 manual_curation exon 26060688 26060797 . - . Parent=GSCOCT00033671001 | |
| 50870 chr10 manual_curation exon 26060984 26061036 . - . Parent=GSCOCT00033671001 | |
| 50871 chr10 manual_curation exon 26062606 26062827 . - . Parent=GSCOCT00033671001 | |
| 50872 chr10 manual_curation CDS 26057260 26057360 . - 1 Parent=GSCOCT00033671001 | |
| 50873 chr10 manual_curation CDS 26057459 26057585 . - 0 Parent=GSCOCT00033671001 | |
| 50874 chr10 manual_curation CDS 26058140 26058237 . - 1 Parent=GSCOCT00033671001 | |
| 50875 chr10 manual_curation CDS 26059358 26059525 . - 1 Parent=GSCOCT00033671001 | |
| 50876 chr10 manual_curation CDS 26060688 26060797 . - 2 Parent=GSCOCT00033671001 | |
| 50877 chr10 manual_curation CDS 26060984 26061036 . - 0 Parent=GSCOCT00033671001 | |
| 50878 chr10 manual_curation CDS 26062606 26062734 . - 0 Parent=GSCOCT00033671001 | |
| 50879 chr10 manual_curation gene 26064496 26066610 . - . ID=GSCOCG00033673001;Name=Cc10_g15090 | |
| 50880 chr10 manual_curation mRNA 26064496 26066610 . - . ID=GSCOCT00033673001;Parent=GSCOCG00033673001;Name=Cc10_g15090 | |
| 50881 chr10 manual_curation polypeptide 26064496 26066238 . - . ID=GSCOCP00033673001;Dbxref=TAIR:AT1G21930.1,TAIR:AT3G42150.2,TrEMBL:B9GUD5,TrEMBL:B9TAZ8,TrEMBL:I1IIF0;Derives_from=GSCOCT00033673001;Name=Cc10_g15090;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033673001~ unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G42150.3)%3B Has 43 Blast hits to 43 proteins in 13 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 43%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(921191..921240%2C919498..919720));owner=coffea | |
| 50882 chr10 manual_curation exon 26066480 26066610 . - . Parent=GSCOCT00033673001 | |
| 50883 chr10 manual_curation exon 26064496 26064718 . - . Parent=GSCOCT00033673001 | |
| 50884 chr10 manual_curation exon 26066189 26066260 . - . Parent=GSCOCT00033673001 | |
| 50885 chr10 manual_curation CDS 26064496 26064718 . - 2 Parent=GSCOCT00033673001 | |
| 50886 chr10 manual_curation CDS 26066189 26066238 . - 0 Parent=GSCOCT00033673001 | |
| 50887 chr10 manual_curation gene 26090985 26093650 . + . ID=GSCOCG00033677001;Name=Cc10_g15100 | |
| 50888 chr10 manual_curation mRNA 26090985 26093650 . + . ID=GSCOCT00033677001;Parent=GSCOCG00033677001;Name=Cc10_g15100 | |
| 50889 chr10 manual_curation polypeptide 26090985 26092479 . + . ID=GSCOCP00033677001;Dbxref=GENE3D:G3DSA:3.30.730.10,InterPro:IPR001471,InterPro:IPR016177,PFAM:PF00847,PRINTS:PR00367,PROFILE:PS51032,SMART:SM00380,SUPERFAMILY:SSF54171,SwissProt:P93007,SwissProt:Q70II3,SwissProt:Q9FH54,TAIR:AT2G33710.2,TAIR:AT5G50080.1,TAIR:AT5G61890.1,TrEMBL:A5BUA0,TrEMBL:B9H7U8,TrEMBL:F6GY54;Derives_from=GSCOCT00033677001;Name=Cc10_g15100;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:ERF112,CC_gene:ERF114,CC_gene:ERF110;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033677001~ Putative uncharacterized protein~ ERF112~ fragment;original_location=join(945987..946191%2C946709..947481);owner=coffea | |
| 50890 chr10 manual_curation exon 26090985 26091189 . + . Parent=GSCOCT00033677001 | |
| 50891 chr10 manual_curation exon 26091707 26093650 . + . Parent=GSCOCT00033677001 | |
| 50892 chr10 manual_curation CDS 26090985 26091189 . + 0 Parent=GSCOCT00033677001 | |
| 50893 chr10 manual_curation CDS 26091707 26092479 . + 1 Parent=GSCOCT00033677001 | |
| 50894 chr10 manual_curation gene 26112580 26120365 . - . ID=GSCOCG00033678001;Name=Cc10_g15110 | |
| 50895 chr10 manual_curation mRNA 26112580 26120365 . - . ID=GSCOCT00033678001;Parent=GSCOCG00033678001;Name=Cc10_g15110 | |
| 50896 chr10 manual_curation polypeptide 26113138 26119829 . - . ID=GSCOCP00033678001;Dbxref=InterPro:IPR001594,PFAM:PF01529,PROFILE:PS50216,SwissProt:Q0WQK2,SwissProt:Q8VYS8,SwissProt:Q9SB58,TAIR:AT3G26935.1,TAIR:AT4G24630.1,TAIR:AT5G50020.2,TrEMBL:B9GT84,TrEMBL:B9H7V0,TrEMBL:B9SE95;Derives_from=GSCOCT00033678001;Name=Cc10_g15110;Ontology_term=CC_evidence_code:ISS,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Probable S-acyltransferase At4g24630,CC_functional_completeness:complete,CC_gene:At4g24630,CC_gene:At5g50020,CC_gene:At3g26935;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033678001~ Probable S-acyltransferase At4g24630~ At4g24630~ complete;original_location=complement(join(974793..974831%2C971774..971959%2C970750..971055%2C970420..970653%2C968140..968646));owner=coffea | |
| 50897 chr10 manual_curation exon 26112580 26113644 . - . Parent=GSCOCT00033678001 | |
| 50898 chr10 manual_curation exon 26115418 26115651 . - . Parent=GSCOCT00033678001 | |
| 50899 chr10 manual_curation exon 26115748 26116053 . - . Parent=GSCOCT00033678001 | |
| 50900 chr10 manual_curation exon 26116772 26116957 . - . Parent=GSCOCT00033678001 | |
| 50901 chr10 manual_curation exon 26119791 26120365 . - . Parent=GSCOCT00033678001 | |
| 50902 chr10 manual_curation CDS 26113138 26113644 . - 0 Parent=GSCOCT00033678001 | |
| 50903 chr10 manual_curation CDS 26115418 26115651 . - 0 Parent=GSCOCT00033678001 | |
| 50904 chr10 manual_curation CDS 26115748 26116053 . - 0 Parent=GSCOCT00033678001 | |
| 50905 chr10 manual_curation CDS 26116772 26116957 . - 0 Parent=GSCOCT00033678001 | |
| 50906 chr10 manual_curation CDS 26119791 26119829 . - 0 Parent=GSCOCT00033678001 | |
| 50907 chr10 manual_curation gene 26131075 26133083 . + . ID=GSCOCG00033680001;Name=Cc10_g15120 | |
| 50908 chr10 manual_curation mRNA 26131075 26133083 . + . ID=GSCOCT00033680001;Parent=GSCOCG00033680001;Name=Cc10_g15120 | |
| 50909 chr10 manual_curation polypeptide 26131244 26132407 . + . ID=GSCOCP00033680001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q8LPB4,SwissProt:Q9C7S5,SwissProt:Q9LYN8,TAIR:AT1G72300.1,TAIR:AT5G07280.1,TAIR:AT5G42440.1,TrEMBL:A5B4H9,TrEMBL:B9RZY2,TrEMBL:F6GY59;Derives_from=GSCOCT00033680001;Name=Cc10_g15120;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Phytosulfokine receptor 1,CC_functional_completeness:fragment,CC_gene:EXS,CC_gene:PSKR,CC_gene:PSYR1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033680001~ Putative Phytosulfokine receptor 1~ EXS~ fragment;original_location=986246..987409;owner=coffea | |
| 50910 chr10 manual_curation exon 26131075 26133083 . + . Parent=GSCOCT00033680001 | |
| 50911 chr10 manual_curation CDS 26131244 26132407 . + 0 Parent=GSCOCT00033680001 | |
| 50912 chr10 manual_curation gene 26139157 26141671 . + . ID=GSCOCG00033681001;Name=Cc10_g15130 | |
| 50913 chr10 manual_curation mRNA 26139157 26141671 . + . ID=GSCOCT00033681001;Parent=GSCOCG00033681001;Name=Cc10_g15130 | |
| 50914 chr10 manual_curation polypeptide 26139157 26141453 . + . ID=GSCOCP00033681001;Dbxref=InterPro:IPR000823,InterPro:IPR002016,InterPro:IPR010255,InterPro:IPR019793,InterPro:IPR019794,PFAM:PF00141,PRINTS:PR00458,PRINTS:PR00461,PROFILE:PS50873,PROSITE:PS00435,PROSITE:PS00436,SUPERFAMILY:SSF48113,SwissProt:P84516,SwissProt:Q96520,SwissProt:Q9SZB9,TAIR:AT1G71695.1,TAIR:AT4G33420.1,TAIR:AT4G36430.1,TrEMBL:B2G335,TrEMBL:I1NH45,TrEMBL:Q94IQ1;Derives_from=GSCOCT00033681001;Name=Cc10_g15130;Ontology_term=CC_evidence_code:ISS,GO:0004601,GO:0006979,GO:0020037,GO:0055114,CC_EC_number:1.11.1.7,PRODUCT:Peroxidase 12,CC_functional_completeness:complete,CC_gene:PER12,CC_gene:SORBIDRAFT_03g046810,CC_gene:PER47;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033681001~ Peroxidase 12~ PER12~ complete;original_location=join(994159..994413%2C994978..995172%2C995838..996455);owner=coffea | |
| 50915 chr10 manual_curation exon 26139157 26139411 . + . Parent=GSCOCT00033681001 | |
| 50916 chr10 manual_curation exon 26139976 26140170 . + . Parent=GSCOCT00033681001 | |
| 50917 chr10 manual_curation exon 26140836 26141671 . + . Parent=GSCOCT00033681001 | |
| 50918 chr10 manual_curation CDS 26139157 26139411 . + 0 Parent=GSCOCT00033681001 | |
| 50919 chr10 manual_curation CDS 26139976 26140170 . + 0 Parent=GSCOCT00033681001 | |
| 50920 chr10 manual_curation CDS 26140836 26141453 . + 0 Parent=GSCOCT00033681001 | |
| 50921 chr10 manual_curation gene 26144950 26148085 . + . ID=GSCOCG00033682001;Name=Cc10_g15140 | |
| 50922 chr10 manual_curation mRNA 26144950 26148085 . + . ID=GSCOCT00033682001;Parent=GSCOCG00033682001;Name=Cc10_g15140 | |
| 50923 chr10 manual_curation polypeptide 26144950 26147771 . + . ID=GSCOCP00033682001;Dbxref=InterPro:IPR000823,InterPro:IPR002016,InterPro:IPR010255,InterPro:IPR019793,InterPro:IPR019794,PFAM:PF00141,PRINTS:PR00458,PRINTS:PR00461,PROFILE:PS50873,PROSITE:PS00435,PROSITE:PS00436,SUPERFAMILY:SSF48113,SwissProt:P37834,SwissProt:P84516,SwissProt:Q96520,TAIR:AT1G71695.1,TAIR:AT2G18140.1,TAIR:AT5G14130.1,TrEMBL:B2G334,TrEMBL:B2G335,TrEMBL:Q94IQ1;Derives_from=GSCOCT00033682001;Name=Cc10_g15140;Ontology_term=CC_evidence_code:ISS,GO:0004601,GO:0006979,GO:0020037,GO:0055114,CC_EC_number:1.11.1.7,PRODUCT:Peroxidase 12,CC_functional_completeness:complete,CC_gene:PER12,CC_gene:SORBIDRAFT_03g046810,CC_gene:PRX74;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033682001~ Peroxidase 12~ PER12~ complete;original_location=join(999952..1000203%2C1000586..1000780%2C1002159..1002773);owner=coffea | |
| 50924 chr10 manual_curation exon 26144950 26145201 . + . Parent=GSCOCT00033682001 | |
| 50925 chr10 manual_curation exon 26145584 26145778 . + . Parent=GSCOCT00033682001 | |
| 50926 chr10 manual_curation exon 26147157 26148085 . + . Parent=GSCOCT00033682001 | |
| 50927 chr10 manual_curation CDS 26144950 26145201 . + 0 Parent=GSCOCT00033682001 | |
| 50928 chr10 manual_curation CDS 26145584 26145778 . + 0 Parent=GSCOCT00033682001 | |
| 50929 chr10 manual_curation CDS 26147157 26147771 . + 0 Parent=GSCOCT00033682001 | |
| 50930 chr10 manual_curation gene 26150594 26152989 . + . ID=GSCOCG00033683001;Name=Cc10_g15150 | |
| 50931 chr10 manual_curation mRNA 26150594 26152989 . + . ID=GSCOCT00033683001;Parent=GSCOCG00033683001;Name=Cc10_g15150 | |
| 50932 chr10 manual_curation polypeptide 26150661 26152824 . + . ID=GSCOCP00033683001;Dbxref=InterPro:IPR000823,InterPro:IPR002016,InterPro:IPR010255,InterPro:IPR019793,InterPro:IPR019794,PFAM:PF00141,PRINTS:PR00458,PRINTS:PR00461,PROFILE:PS50873,PROSITE:PS00435,PROSITE:PS00436,SUPERFAMILY:SSF48113,SwissProt:O23237,SwissProt:P84516,SwissProt:Q96520,TAIR:AT1G71695.1,TAIR:AT4G36430.1,TAIR:AT5G06730.1,TrEMBL:B7UCP4,TrEMBL:B9GT82,TrEMBL:Q94IQ1;Derives_from=GSCOCT00033683001;Name=Cc10_g15150;Ontology_term=CC_evidence_code:ISS,GO:0004601,GO:0006979,GO:0020037,GO:0055114,CC_EC_number:1.11.1.7,PRODUCT:Peroxidase 12,CC_functional_completeness:complete,CC_gene:PER12,CC_gene:SORBIDRAFT_03g046810,CC_gene:PER49;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033683001~ Peroxidase 12~ PER12~ complete;original_location=join(1005663..1005905%2C1006616..1006810%2C1007206..1007826);owner=coffea | |
| 50933 chr10 manual_curation exon 26150594 26150903 . + . Parent=GSCOCT00033683001 | |
| 50934 chr10 manual_curation exon 26151614 26151808 . + . Parent=GSCOCT00033683001 | |
| 50935 chr10 manual_curation exon 26152204 26152989 . + . Parent=GSCOCT00033683001 | |
| 50936 chr10 manual_curation CDS 26150661 26150903 . + 0 Parent=GSCOCT00033683001 | |
| 50937 chr10 manual_curation CDS 26151614 26151808 . + 0 Parent=GSCOCT00033683001 | |
| 50938 chr10 manual_curation CDS 26152204 26152824 . + 0 Parent=GSCOCT00033683001 | |
| 50939 chr10 manual_curation gene 26156116 26157715 . + . ID=GSCOCG00033684001;Name=Cc10_g15160 | |
| 50940 chr10 manual_curation mRNA 26156116 26157715 . + . ID=GSCOCT00033684001;Parent=GSCOCG00033684001;Name=Cc10_g15160 | |
| 50941 chr10 manual_curation polypeptide 26156159 26156422 . + . ID=GSCOCP00033684001;Dbxref=InterPro:IPR021899,PFAM:PF12023,TAIR:AT4G09890.1,TrEMBL:A9P994,TrEMBL:B9H7V5,TrEMBL:F6GY61;Derives_from=GSCOCT00033684001;Name=Cc10_g15160;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF3511),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033684001~ Protein of unknown function (DUF3511)~ unknown_gene~ complete;original_location=1011161..1011424;owner=coffea | |
| 50942 chr10 manual_curation exon 26156116 26157715 . + . Parent=GSCOCT00033684001 | |
| 50943 chr10 manual_curation CDS 26156159 26156422 . + 0 Parent=GSCOCT00033684001 | |
| 50944 chr10 manual_curation gene 26157877 26161584 . - . ID=GSCOCG00033685001;Name=Cc10_g15170 | |
| 50945 chr10 manual_curation mRNA 26157877 26161584 . - . ID=GSCOCT00033685001;Parent=GSCOCG00033685001;Name=Cc10_g15170 | |
| 50946 chr10 manual_curation polypeptide 26157877 26161584 . - . ID=GSCOCP00033685001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q6I5Y0,SwissProt:Q9LFT8,SwissProt:Q9ZVM9,TAIR:AT1G53050.1,TAIR:AT1G54610.2,TAIR:AT1G71530.1,TrEMBL:B9SEA7,TrEMBL:B9T6L6,TrEMBL:F6H4C2;Derives_from=GSCOCT00033685001;Name=Cc10_g15170;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.23,PRODUCT:Cell division protein kinase 7%2C putative,CC_functional_completeness:complete,CC_gene:At1g54610,CC_gene:CDKC-1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033685001~ Cell division protein kinase 7%2C putative~ At1g54610~ complete;original_location=complement(join(1016442..1016586%2C1016038..1016309%2C1015467..1015751%2C1015054..1015371%2C1014569..1014790%2C1014203..1014297%2C1013445..1013538%2C1012879..1013271));owner=coffea | |
| 50947 chr10 manual_curation exon 26157877 26158269 . - . Parent=GSCOCT00033685001 | |
| 50948 chr10 manual_curation exon 26158443 26158536 . - . Parent=GSCOCT00033685001 | |
| 50949 chr10 manual_curation exon 26159201 26159295 . - . Parent=GSCOCT00033685001 | |
| 50950 chr10 manual_curation exon 26159567 26159788 . - . Parent=GSCOCT00033685001 | |
| 50951 chr10 manual_curation exon 26160052 26160369 . - . Parent=GSCOCT00033685001 | |
| 50952 chr10 manual_curation exon 26160465 26160749 . - . Parent=GSCOCT00033685001 | |
| 50953 chr10 manual_curation exon 26161036 26161307 . - . Parent=GSCOCT00033685001 | |
| 50954 chr10 manual_curation exon 26161440 26161584 . - . Parent=GSCOCT00033685001 | |
| 50955 chr10 manual_curation CDS 26157877 26158269 . - 0 Parent=GSCOCT00033685001 | |
| 50956 chr10 manual_curation CDS 26158443 26158536 . - 2 Parent=GSCOCT00033685001 | |
| 50957 chr10 manual_curation CDS 26159201 26159295 . - 0 Parent=GSCOCT00033685001 | |
| 50958 chr10 manual_curation CDS 26159567 26159788 . - 0 Parent=GSCOCT00033685001 | |
| 50959 chr10 manual_curation CDS 26160052 26160369 . - 0 Parent=GSCOCT00033685001 | |
| 50960 chr10 manual_curation CDS 26160465 26160749 . - 0 Parent=GSCOCT00033685001 | |
| 50961 chr10 manual_curation CDS 26161036 26161307 . - 1 Parent=GSCOCT00033685001 | |
| 50962 chr10 manual_curation CDS 26161440 26161584 . - 0 Parent=GSCOCT00033685001 | |
| 50963 chr10 manual_curation gene 26163565 26167036 . - . ID=GSCOCG00033686001;Name=Cc10_g15180 | |
| 50964 chr10 manual_curation mRNA 26163565 26167036 . - . ID=GSCOCT00033686001;Parent=GSCOCG00033686001;Name=Cc10_g15180 | |
| 50965 chr10 manual_curation polypeptide 26163859 26166983 . - . ID=GSCOCP00033686001;Dbxref=TAIR:AT1G34000.1,TrEMBL:B9GT79,TrEMBL:B9H7V8,TrEMBL:F6GY64;Derives_from=GSCOCT00033686001;Name=Cc10_g15180;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:one-helix protein 2,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033686001~ one-helix protein 2~ unknown_gene~ complete;original_location=complement(join(1021534..1021985%2C1018861..1018975));owner=coffea | |
| 50966 chr10 manual_curation exon 26163565 26163973 . - . Parent=GSCOCT00033686001 | |
| 50967 chr10 manual_curation exon 26166532 26167036 . - . Parent=GSCOCT00033686001 | |
| 50968 chr10 manual_curation CDS 26163859 26163973 . - 2 Parent=GSCOCT00033686001 | |
| 50969 chr10 manual_curation CDS 26166532 26166983 . - 0 Parent=GSCOCT00033686001 | |
| 50970 chr10 manual_curation gene 26174887 26178732 . - . ID=GSCOCG00033687001;Name=Cc10_g15190 | |
| 50971 chr10 manual_curation mRNA 26174887 26178732 . - . ID=GSCOCT00033687001;Parent=GSCOCG00033687001;Name=Cc10_g15190 | |
| 50972 chr10 manual_curation polypeptide 26175383 26177537 . - . ID=GSCOCP00033687001;Dbxref=TAIR:AT1G22790.1,TAIR:AT1G34010.1,TrEMBL:B9SEB0,TrEMBL:D7SRF9,TrEMBL:I1NH48;Derives_from=GSCOCT00033687001;Name=Cc10_g15190;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033687001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34010.1)%3B Has 67 Blast hits to 67 proteins in 12 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 67%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(1031989..1032539%2C1030385..1030454));owner=coffea | |
| 50973 chr10 manual_curation exon 26178358 26178388 . - . Parent=GSCOCT00033687001 | |
| 50974 chr10 manual_curation exon 26178410 26178732 . - . Parent=GSCOCT00033687001 | |
| 50975 chr10 manual_curation exon 26174887 26175452 . - . Parent=GSCOCT00033687001 | |
| 50976 chr10 manual_curation exon 26176987 26177637 . - . Parent=GSCOCT00033687001 | |
| 50977 chr10 manual_curation CDS 26175383 26175452 . - 2 Parent=GSCOCT00033687001 | |
| 50978 chr10 manual_curation CDS 26176987 26177537 . - 0 Parent=GSCOCT00033687001 | |
| 50979 chr10 manual_curation gene 26192218 26196407 . - . ID=GSCOCG00033689001;Name=Cc10_g15200 | |
| 50980 chr10 manual_curation mRNA 26192218 26196407 . - . ID=GSCOCT00033689001;Parent=GSCOCG00033689001;Name=Cc10_g15200 | |
| 50981 chr10 manual_curation polypeptide 26192665 26196270 . - . ID=GSCOCP00033689001;Dbxref=InterPro:IPR016549,PIR:PIRSF009193,TAIR:AT4G09830.1,TAIR:AT5G64780.1,TrEMBL:A5ASJ1,TrEMBL:D7SW95,TrEMBL:F6GY65;Derives_from=GSCOCT00033689001;Name=Cc10_g15200;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterised conserved protein UCP009193,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033689001~ Uncharacterised conserved protein UCP009193~ unknown_gene~ complete;original_location=complement(join(1051114..1051272%2C1048964..1049044%2C1047667..1048074));owner=coffea | |
| 50982 chr10 manual_curation exon 26192218 26193072 . - . Parent=GSCOCT00033689001 | |
| 50983 chr10 manual_curation exon 26193962 26194042 . - . Parent=GSCOCT00033689001 | |
| 50984 chr10 manual_curation exon 26196112 26196407 . - . Parent=GSCOCT00033689001 | |
| 50985 chr10 manual_curation CDS 26192665 26193072 . - 0 Parent=GSCOCT00033689001 | |
| 50986 chr10 manual_curation CDS 26193962 26194042 . - 0 Parent=GSCOCT00033689001 | |
| 50987 chr10 manual_curation CDS 26196112 26196270 . - 0 Parent=GSCOCT00033689001 | |
| 50988 chr10 manual_curation gene 26211118 26215383 . + . ID=GSCOCG00033690001;Name=Cc10_g15210 | |
| 50989 chr10 manual_curation mRNA 26211118 26215383 . + . ID=GSCOCT00033690001;Parent=GSCOCG00033690001;Name=Cc10_g15210 | |
| 50990 chr10 manual_curation polypeptide 26212083 26215126 . + . ID=GSCOCP00033690001;Dbxref=InterPro:IPR004853,PFAM:PF03151,SwissProt:Q1JQ66,SwissProt:Q8RXL8,SwissProt:Q9SRE4,TAIR:AT1G34020.1,TAIR:AT4G09810.1,TAIR:AT4G39390.1,TrEMBL:B9GT76,TrEMBL:B9H7W1,TrEMBL:D7SW88;Derives_from=GSCOCT00033690001;Name=Cc10_g15210;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:UDP-galactose transporter 2,CC_functional_completeness:complete,CC_gene:UDP-GALT2,CC_gene:At1g06890,CC_gene:slc35e3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033690001~ UDP-galactose transporter 2~ UDP-GALT2~ complete;original_location=join(1067085..1067214%2C1067731..1067915%2C1068023..1068223%2C1068686..1068847%2C1069808..1070128);owner=coffea | |
| 50991 chr10 manual_curation exon 26211118 26212212 . + . Parent=GSCOCT00033690001 | |
| 50992 chr10 manual_curation exon 26212729 26212913 . + . Parent=GSCOCT00033690001 | |
| 50993 chr10 manual_curation exon 26213021 26213221 . + . Parent=GSCOCT00033690001 | |
| 50994 chr10 manual_curation exon 26213684 26213845 . + . Parent=GSCOCT00033690001 | |
| 50995 chr10 manual_curation exon 26214806 26215383 . + . Parent=GSCOCT00033690001 | |
| 50996 chr10 manual_curation CDS 26212083 26212212 . + 0 Parent=GSCOCT00033690001 | |
| 50997 chr10 manual_curation CDS 26212729 26212913 . + 1 Parent=GSCOCT00033690001 | |
| 50998 chr10 manual_curation CDS 26213021 26213221 . + 0 Parent=GSCOCT00033690001 | |
| 50999 chr10 manual_curation CDS 26213684 26213845 . + 0 Parent=GSCOCT00033690001 | |
| 51000 chr10 manual_curation CDS 26214806 26215126 . + 0 Parent=GSCOCT00033690001 | |
| 51001 chr10 manual_curation gene 26215605 26219098 . - . ID=GSCOCG00033691001;Name=Cc10_g15220 | |
| 51002 chr10 manual_curation mRNA 26215605 26219098 . - . ID=GSCOCT00033691001;Parent=GSCOCG00033691001;Name=Cc10_g15220 | |
| 51003 chr10 manual_curation polypeptide 26215873 26219098 . - . ID=GSCOCP00033691001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008266,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00109,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:Q8VZG8,SwissProt:Q9LP24,SwissProt:Q9SHI2,TAIR:AT1G17230.1,TAIR:AT1G35710.1,TAIR:AT4G08850.1,TrEMBL:A5AGK9,TrEMBL:A5B048,TrEMBL:F6GSK7;Derives_from=GSCOCT00033691001;Name=Cc10_g15220;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0004713,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At4g08850,CC_functional_completeness:complete,CC_gene:At4g08850,CC_gene:At1g35710,CC_gene:At1g17230;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033691001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At4g08850~ At4g08850~ complete;original_location=complement(join(1073133..1074100%2C1071304..1072706%2C1070875..1071212));owner=coffea | |
| 51004 chr10 manual_curation exon 26215605 26216210 . - . Parent=GSCOCT00033691001 | |
| 51005 chr10 manual_curation exon 26216302 26217704 . - . Parent=GSCOCT00033691001 | |
| 51006 chr10 manual_curation exon 26218131 26219098 . - . Parent=GSCOCT00033691001 | |
| 51007 chr10 manual_curation CDS 26215873 26216210 . - 1 Parent=GSCOCT00033691001 | |
| 51008 chr10 manual_curation CDS 26216302 26217704 . - 2 Parent=GSCOCT00033691001 | |
| 51009 chr10 manual_curation CDS 26218131 26219098 . - 0 Parent=GSCOCT00033691001 | |
| 51010 chr10 manual_curation gene 26230433 26234215 . + . ID=GSCOCG00033695001;Name=Cc10_g15230 | |
| 51011 chr10 manual_curation mRNA 26230433 26234215 . + . ID=GSCOCT00033695001;Parent=GSCOCG00033695001;Name=Cc10_g15230 | |
| 51012 chr10 manual_curation polypeptide 26233809 26234024 . + . ID=GSCOCP00033695001;Derives_from=GSCOCT00033695001;Name=Cc10_g15230;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033695001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1088811..1089026;owner=coffea | |
| 51013 chr10 manual_curation exon 26230433 26230814 . + . Parent=GSCOCT00033695001 | |
| 51014 chr10 manual_curation exon 26232963 26234215 . + . Parent=GSCOCT00033695001 | |
| 51015 chr10 manual_curation CDS 26233809 26234024 . + 0 Parent=GSCOCT00033695001 | |
| 51016 chr10 manual_curation gene 26236699 26238757 . + . ID=GSCOCG00033697001;Name=Cc10_g15240 | |
| 51017 chr10 manual_curation mRNA 26236699 26238757 . + . ID=GSCOCT00033697001;Parent=GSCOCG00033697001;Name=Cc10_g15240 | |
| 51018 chr10 manual_curation polypeptide 26236699 26238757 . + . ID=GSCOCP00033697001;Dbxref=InterPro:IPR004853,PFAM:PF03151,SwissProt:A4IFK2,SwissProt:Q8RXL8,SwissProt:Q9SRE4,TAIR:AT1G34020.1,TAIR:AT4G09810.1,TAIR:AT4G39390.1,TrEMBL:B9GT76,TrEMBL:D7SRG1,TrEMBL:H1A8N2;Derives_from=GSCOCT00033697001;Name=Cc10_g15240;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative UDP-galactose transporter 2,CC_functional_completeness:fragment,CC_gene:UDP-GALT2,CC_gene:At1g06890,CC_gene:SLC35E3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033697001~ Putative UDP-galactose transporter 2~ UDP-GALT2~ fragment;original_location=join(1091701..1091886%2C1092346..1092507%2C1093433..1093759);owner=coffea | |
| 51019 chr10 manual_curation exon 26236699 26236884 . + . Parent=GSCOCT00033697001 | |
| 51020 chr10 manual_curation exon 26237344 26237505 . + . Parent=GSCOCT00033697001 | |
| 51021 chr10 manual_curation exon 26238431 26238757 . + . Parent=GSCOCT00033697001 | |
| 51022 chr10 manual_curation CDS 26236699 26236884 . + 0 Parent=GSCOCT00033697001 | |
| 51023 chr10 manual_curation CDS 26237344 26237505 . + 0 Parent=GSCOCT00033697001 | |
| 51024 chr10 manual_curation CDS 26238431 26238757 . + 0 Parent=GSCOCT00033697001 | |
| 51025 chr10 manual_curation gene 26239000 26242402 . - . ID=GSCOCG00033698001;Name=Cc10_g15250 | |
| 51026 chr10 manual_curation mRNA 26239000 26242402 . - . ID=GSCOCT00033698001;Parent=GSCOCG00033698001;Name=Cc10_g15250 | |
| 51027 chr10 manual_curation polypeptide 26239178 26242402 . - . ID=GSCOCP00033698001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PFAM:PF07714,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00107,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:Q8VZG8,SwissProt:Q9LP24,SwissProt:Q9SHI2,TAIR:AT1G17230.1,TAIR:AT1G35710.1,TAIR:AT4G08850.1,TrEMBL:A5AGK9,TrEMBL:A5B048,TrEMBL:F6GSK7;Derives_from=GSCOCT00033698001;Name=Cc10_g15250;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Probable LRR receptor-like serine/threonine-protein kinase At4g08850,CC_functional_completeness:complete,CC_gene:At4g08850,CC_gene:At1g35710,CC_gene:At1g17230;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033698001~ Probable LRR receptor-like serine/threonine-protein kinase At4g08850~ At4g08850~ complete;original_location=complement(join(1094837..1097404%2C1094608..1094707%2C1094180..1094517));owner=coffea | |
| 51028 chr10 manual_curation exon 26239000 26239515 . - . Parent=GSCOCT00033698001 | |
| 51029 chr10 manual_curation exon 26239606 26239705 . - . Parent=GSCOCT00033698001 | |
| 51030 chr10 manual_curation exon 26239835 26242402 . - . Parent=GSCOCT00033698001 | |
| 51031 chr10 manual_curation CDS 26239178 26239515 . - 1 Parent=GSCOCT00033698001 | |
| 51032 chr10 manual_curation CDS 26239606 26239705 . - 0 Parent=GSCOCT00033698001 | |
| 51033 chr10 manual_curation CDS 26239835 26242402 . - 0 Parent=GSCOCT00033698001 | |
| 51034 chr10 manual_curation gene 26250798 26252102 . + . ID=GSCOCG00033701001;Name=Cc10_g15260 | |
| 51035 chr10 manual_curation mRNA 26250798 26252102 . + . ID=GSCOCT00033701001;Parent=GSCOCG00033701001;Name=Cc10_g15260 | |
| 51036 chr10 manual_curation polypeptide 26250798 26252102 . + . ID=GSCOCP00033701001;Dbxref=InterPro:IPR005202,PFAM:PF03514,PROFILE:PS50985,SwissProt:Q8S4W7,SwissProt:Q9SLH3,SwissProt:Q9ST48,TAIR:AT1G14920.1,TAIR:AT2G01570.1,TAIR:AT3G03450.1,TrEMBL:B9HWZ8,TrEMBL:B9HX04,TrEMBL:B9RZP4;Derives_from=GSCOCT00033701001;Name=Cc10_g15260;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative DELLA protein GAI1,CC_functional_completeness:fragment,CC_gene:GAI1,CC_gene:RGA,CC_gene:D8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033701001~ Putative DELLA protein GAI1~ GAI1~ fragment;original_location=1105800..1107104;owner=coffea | |
| 51037 chr10 manual_curation exon 26250798 26252102 . + . Parent=GSCOCT00033701001 | |
| 51038 chr10 manual_curation CDS 26250798 26252102 . + 0 Parent=GSCOCT00033701001 | |
| 51039 chr10 manual_curation gene 26253276 26266057 . - . ID=GSCOCG00033702001;Name=Cc10_g15270 | |
| 51040 chr10 manual_curation mRNA 26253276 26266057 . - . ID=GSCOCT00033702001;Parent=GSCOCG00033702001;Name=Cc10_g15270 | |
| 51041 chr10 manual_curation polypeptide 26253543 26264709 . - . ID=GSCOCP00033702001;Dbxref=SwissProt:Q9AWL7,SwissProt:Q9SQI2,TAIR:AT1G22770.1,TrEMBL:B9H7W3,TrEMBL:F2Z6M2,TrEMBL:F6H6Q8;Derives_from=GSCOCT00033702001;Name=Cc10_g15270;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein GIGANTEA,CC_functional_completeness:complete,CC_gene:GI;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033702001~ Protein GIGANTEA~ GI~ complete;original_location=complement(join(1119625..1119711%2C1117530..1117601%2C1117313..1117367%2C1117055..1117197%2C1116627..1116898%2C1115574..1115629%2C1113442..1113682%2C1113222..1113372%2C1112438..1112647%2C1110777..1112312%2C1110003..1110071%2C1109480..1109698%2C1109069..1109161%2C1108545..1108844));owner=coffea | |
| 51042 chr10 manual_curation exon 26253276 26253842 . - . Parent=GSCOCT00033702001 | |
| 51043 chr10 manual_curation exon 26254067 26254159 . - . Parent=GSCOCT00033702001 | |
| 51044 chr10 manual_curation exon 26254478 26254696 . - . Parent=GSCOCT00033702001 | |
| 51045 chr10 manual_curation exon 26255001 26255069 . - . Parent=GSCOCT00033702001 | |
| 51046 chr10 manual_curation exon 26255775 26257310 . - . Parent=GSCOCT00033702001 | |
| 51047 chr10 manual_curation exon 26257436 26257645 . - . Parent=GSCOCT00033702001 | |
| 51048 chr10 manual_curation exon 26258220 26258370 . - . Parent=GSCOCT00033702001 | |
| 51049 chr10 manual_curation exon 26258440 26258680 . - . Parent=GSCOCT00033702001 | |
| 51050 chr10 manual_curation exon 26260572 26260627 . - . Parent=GSCOCT00033702001 | |
| 51051 chr10 manual_curation exon 26261625 26261896 . - . Parent=GSCOCT00033702001 | |
| 51052 chr10 manual_curation exon 26262053 26262195 . - . Parent=GSCOCT00033702001 | |
| 51053 chr10 manual_curation exon 26262311 26262365 . - . Parent=GSCOCT00033702001 | |
| 51054 chr10 manual_curation exon 26262528 26262599 . - . Parent=GSCOCT00033702001 | |
| 51055 chr10 manual_curation exon 26264623 26266057 . - . Parent=GSCOCT00033702001 | |
| 51056 chr10 manual_curation CDS 26253543 26253842 . - 0 Parent=GSCOCT00033702001 | |
| 51057 chr10 manual_curation CDS 26254067 26254159 . - 0 Parent=GSCOCT00033702001 | |
| 51058 chr10 manual_curation CDS 26254478 26254696 . - 0 Parent=GSCOCT00033702001 | |
| 51059 chr10 manual_curation CDS 26255001 26255069 . - 0 Parent=GSCOCT00033702001 | |
| 51060 chr10 manual_curation CDS 26255775 26257310 . - 0 Parent=GSCOCT00033702001 | |
| 51061 chr10 manual_curation CDS 26257436 26257645 . - 0 Parent=GSCOCT00033702001 | |
| 51062 chr10 manual_curation CDS 26258220 26258370 . - 2 Parent=GSCOCT00033702001 | |
| 51063 chr10 manual_curation CDS 26258440 26258680 . - 1 Parent=GSCOCT00033702001 | |
| 51064 chr10 manual_curation CDS 26260572 26260627 . - 2 Parent=GSCOCT00033702001 | |
| 51065 chr10 manual_curation CDS 26261625 26261896 . - 0 Parent=GSCOCT00033702001 | |
| 51066 chr10 manual_curation CDS 26262053 26262195 . - 1 Parent=GSCOCT00033702001 | |
| 51067 chr10 manual_curation CDS 26262311 26262365 . - 0 Parent=GSCOCT00033702001 | |
| 51068 chr10 manual_curation CDS 26262528 26262599 . - 0 Parent=GSCOCT00033702001 | |
| 51069 chr10 manual_curation CDS 26264623 26264709 . - 0 Parent=GSCOCT00033702001 | |
| 51070 chr10 manual_curation gene 26277689 26285799 . + . ID=GSCOCG00033703001;Name=Cc10_g15280 | |
| 51071 chr10 manual_curation mRNA 26277689 26285799 . + . ID=GSCOCT00033703001;Parent=GSCOCG00033703001;Name=Cc10_g15280 | |
| 51072 chr10 manual_curation polypeptide 26277721 26285561 . + . ID=GSCOCP00033703001;Dbxref=GENE3D:G3DSA:2.60.40.1120,InterPro:IPR000834,InterPro:IPR008969,InterPro:IPR014766,PFAM:PF00246,PRINTS:PR00765,PROSITE:PS00132,PROSITE:PS00133,SMART:SM00631,SUPERFAMILY:SSF49464,SwissProt:O75976,SwissProt:O89001,SwissProt:Q9JHW1,TAIR:AT1G71696.2,TrEMBL:B9H7W5,TrEMBL:D7SXX9,TrEMBL:I1NH52;Derives_from=GSCOCT00033703001;Name=Cc10_g15280;Ontology_term=CC_evidence_code:ISS,GO:0004180,GO:0004181,GO:0006508,GO:0008270,CC_EC_number:3.4.17.22,PRODUCT:Putative Carboxypeptidase D,CC_functional_completeness:complete,CC_gene:CPD,CC_gene:Cpd;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033703001~ Putative Carboxypeptidase D~ CPD~ complete;original_location=join(1132723..1132831%2C1133381..1133465%2C1133556..1133651%2C1134161..1134191%2C1134300..1134356%2C1134710..1134805%2C1135289..1135411%2C1136426..1136530%2C1137281..1137327%2C1137962..1138087%2C1138205..1138307%2C1138873..1138935%2C1139447..1139530%2C1139994..1140057%2C1140247..1140563);owner=coffea | |
| 51073 chr10 manual_curation exon 26277689 26277829 . + . Parent=GSCOCT00033703001 | |
| 51074 chr10 manual_curation exon 26278379 26278463 . + . Parent=GSCOCT00033703001 | |
| 51075 chr10 manual_curation exon 26278554 26278649 . + . Parent=GSCOCT00033703001 | |
| 51076 chr10 manual_curation exon 26279159 26279189 . + . Parent=GSCOCT00033703001 | |
| 51077 chr10 manual_curation exon 26279298 26279354 . + . Parent=GSCOCT00033703001 | |
| 51078 chr10 manual_curation exon 26279708 26279803 . + . Parent=GSCOCT00033703001 | |
| 51079 chr10 manual_curation exon 26280287 26280409 . + . Parent=GSCOCT00033703001 | |
| 51080 chr10 manual_curation exon 26281424 26281528 . + . Parent=GSCOCT00033703001 | |
| 51081 chr10 manual_curation exon 26282279 26282325 . + . Parent=GSCOCT00033703001 | |
| 51082 chr10 manual_curation exon 26282960 26283085 . + . Parent=GSCOCT00033703001 | |
| 51083 chr10 manual_curation exon 26283203 26283305 . + . Parent=GSCOCT00033703001 | |
| 51084 chr10 manual_curation exon 26283871 26283933 . + . Parent=GSCOCT00033703001 | |
| 51085 chr10 manual_curation exon 26284445 26284528 . + . Parent=GSCOCT00033703001 | |
| 51086 chr10 manual_curation exon 26284992 26285055 . + . Parent=GSCOCT00033703001 | |
| 51087 chr10 manual_curation exon 26285245 26285799 . + . Parent=GSCOCT00033703001 | |
| 51088 chr10 manual_curation CDS 26277721 26277829 . + 0 Parent=GSCOCT00033703001 | |
| 51089 chr10 manual_curation CDS 26278379 26278463 . + 1 Parent=GSCOCT00033703001 | |
| 51090 chr10 manual_curation CDS 26278554 26278649 . + 2 Parent=GSCOCT00033703001 | |
| 51091 chr10 manual_curation CDS 26279159 26279189 . + 2 Parent=GSCOCT00033703001 | |
| 51092 chr10 manual_curation CDS 26279298 26279354 . + 0 Parent=GSCOCT00033703001 | |
| 51093 chr10 manual_curation CDS 26279708 26279803 . + 0 Parent=GSCOCT00033703001 | |
| 51094 chr10 manual_curation CDS 26280287 26280409 . + 0 Parent=GSCOCT00033703001 | |
| 51095 chr10 manual_curation CDS 26281424 26281528 . + 0 Parent=GSCOCT00033703001 | |
| 51096 chr10 manual_curation CDS 26282279 26282325 . + 0 Parent=GSCOCT00033703001 | |
| 51097 chr10 manual_curation CDS 26282960 26283085 . + 2 Parent=GSCOCT00033703001 | |
| 51098 chr10 manual_curation CDS 26283203 26283305 . + 2 Parent=GSCOCT00033703001 | |
| 51099 chr10 manual_curation CDS 26283871 26283933 . + 0 Parent=GSCOCT00033703001 | |
| 51100 chr10 manual_curation CDS 26284445 26284528 . + 0 Parent=GSCOCT00033703001 | |
| 51101 chr10 manual_curation CDS 26284992 26285055 . + 0 Parent=GSCOCT00033703001 | |
| 51102 chr10 manual_curation CDS 26285245 26285561 . + 1 Parent=GSCOCT00033703001 | |
| 51103 chr10 manual_curation gene 26286551 26292356 . - . ID=GSCOCG00033704001;Name=Cc10_g15290 | |
| 51104 chr10 manual_curation mRNA 26286551 26292356 . - . ID=GSCOCT00033704001;Parent=GSCOCG00033704001;Name=Cc10_g15290 | |
| 51105 chr10 manual_curation polypeptide 26286792 26292356 . - . ID=GSCOCP00033704001;Dbxref=GENE3D:G3DSA:2.10.25.30,GENE3D:G3DSA:3.40.640.10,GENE3D:G3DSA:3.90.1150.10,InterPro:IPR006947,InterPro:IPR006948,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,PFAM:PF04863,PFAM:PF04864,SUPERFAMILY:SSF53383,SwissProt:P31757,SwissProt:Q93Z38,SwissProt:Q9FE98,TAIR:AT1G34040.1,TAIR:AT1G34060.1,TAIR:AT4G24670.1,TrEMBL:B9SED2,TrEMBL:D7SXY7,TrEMBL:D7SXY9;Derives_from=GSCOCT00033704001;Name=Cc10_g15290;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0016846,GO:0030170,CC_EC_number:4.4.1.4,PRODUCT:Tryptophan aminotransferase-related protein 4,CC_functional_completeness:complete,CC_gene:TAR4,CC_gene:TAR3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033704001~ Tryptophan aminotransferase-related protein 4~ TAR4~ complete;original_location=complement(join(1147075..1147358%2C1143633..1143927%2C1143258..1143547%2C1142728..1143008%2C1141794..1142008));owner=coffea | |
| 51106 chr10 manual_curation exon 26286551 26287006 . - . Parent=GSCOCT00033704001 | |
| 51107 chr10 manual_curation exon 26287726 26288006 . - . Parent=GSCOCT00033704001 | |
| 51108 chr10 manual_curation exon 26288256 26288545 . - . Parent=GSCOCT00033704001 | |
| 51109 chr10 manual_curation exon 26288631 26288925 . - . Parent=GSCOCT00033704001 | |
| 51110 chr10 manual_curation exon 26292073 26292356 . - . Parent=GSCOCT00033704001 | |
| 51111 chr10 manual_curation CDS 26286792 26287006 . - 1 Parent=GSCOCT00033704001 | |
| 51112 chr10 manual_curation CDS 26287726 26288006 . - 2 Parent=GSCOCT00033704001 | |
| 51113 chr10 manual_curation CDS 26288256 26288545 . - 0 Parent=GSCOCT00033704001 | |
| 51114 chr10 manual_curation CDS 26288631 26288925 . - 2 Parent=GSCOCT00033704001 | |
| 51115 chr10 manual_curation CDS 26292073 26292356 . - 0 Parent=GSCOCT00033704001 | |
| 51116 chr10 manual_curation gene 26301168 26301702 . + . ID=GSCOCG00033706001;Name=Cc10_g15300 | |
| 51117 chr10 manual_curation mRNA 26301168 26301702 . + . ID=GSCOCT00033706001;Parent=GSCOCG00033706001;Name=Cc10_g15300 | |
| 51118 chr10 manual_curation polypeptide 26301168 26301702 . + . ID=GSCOCP00033706001;Dbxref=GENE3D:G3DSA:3.40.640.10,InterPro:IPR006948,InterPro:IPR015421,InterPro:IPR015424,PFAM:PF04864,SUPERFAMILY:SSF53383,SwissProt:Q93Z38,SwissProt:Q9FE98,SwissProt:Q9S7N2,TAIR:AT1G34040.1,TAIR:AT1G34060.1,TAIR:AT1G70560.1,TrEMBL:A5BRD1,TrEMBL:B9SED3,TrEMBL:D7SXY9;Derives_from=GSCOCT00033706001;Name=Cc10_g15300;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0016846,GO:0030170,CC_EC_number:4.4.1.4,PRODUCT:Tryptophan aminotransferase-related protein 4,CC_functional_completeness:fragment,CC_gene:TAR4,CC_gene:TAR3,CC_gene:TAA1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033706001~ Tryptophan aminotransferase-related protein 4~ TAR4~ fragment;original_location=join(1156170..1156385%2C1156516..1156704);owner=coffea | |
| 51119 chr10 manual_curation exon 26301168 26301383 . + . Parent=GSCOCT00033706001 | |
| 51120 chr10 manual_curation exon 26301514 26301702 . + . Parent=GSCOCT00033706001 | |
| 51121 chr10 manual_curation CDS 26301168 26301383 . + 0 Parent=GSCOCT00033706001 | |
| 51122 chr10 manual_curation CDS 26301514 26301702 . + 0 Parent=GSCOCT00033706001 | |
| 51123 chr10 manual_curation gene 26306082 26306430 . - . ID=GSCOCG00033707001;Name=Cc10_g15310 | |
| 51124 chr10 manual_curation mRNA 26306082 26306430 . - . ID=GSCOCT00033707001;Parent=GSCOCG00033707001;Name=Cc10_g15310 | |
| 51125 chr10 manual_curation polypeptide 26306082 26306430 . - . ID=GSCOCP00033707001;Dbxref=GENE3D:G3DSA:3.90.1150.10,InterPro:IPR006948,InterPro:IPR015422,InterPro:IPR015424,PFAM:PF04864,SUPERFAMILY:SSF53383,SwissProt:Q41233,SwissProt:Q93Z38,SwissProt:Q9FE98,TAIR:AT1G34040.1,TAIR:AT1G34060.1,TrEMBL:B9GT69,TrEMBL:D7SXY6,TrEMBL:F6H6R2;Derives_from=GSCOCT00033707001;Name=Cc10_g15310;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0016846,GO:0030170,CC_EC_number:4.4.1.4,PRODUCT:Putative Tryptophan aminotransferase-related protein 4,CC_functional_completeness:fragment,CC_gene:TAR4,CC_gene:TAR3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033707001~ Putative Tryptophan aminotransferase-related protein 4~ TAR4~ fragment;original_location=complement(join(1161384..1161432%2C1161084..1161271));owner=coffea | |
| 51126 chr10 manual_curation exon 26306082 26306269 . - . Parent=GSCOCT00033707001 | |
| 51127 chr10 manual_curation exon 26306382 26306430 . - . Parent=GSCOCT00033707001 | |
| 51128 chr10 manual_curation CDS 26306082 26306269 . - 1 Parent=GSCOCT00033707001 | |
| 51129 chr10 manual_curation CDS 26306382 26306430 . - 0 Parent=GSCOCT00033707001 | |
| 51130 chr10 manual_curation gene 26306569 26307931 . - . ID=GSCOCG00033708001;Name=Cc10_g15320 | |
| 51131 chr10 manual_curation mRNA 26306569 26307931 . - . ID=GSCOCT00033708001;Parent=GSCOCG00033708001;Name=Cc10_g15320 | |
| 51132 chr10 manual_curation polypeptide 26306569 26307931 . - . ID=GSCOCP00033708001;Dbxref=GENE3D:G3DSA:2.10.25.30,GENE3D:G3DSA:3.40.640.10,InterPro:IPR006947,InterPro:IPR006948,InterPro:IPR015421,InterPro:IPR015424,PFAM:PF04863,PFAM:PF04864,SUPERFAMILY:SSF53383,SwissProt:P31756,SwissProt:Q93Z38,SwissProt:Q9FE98,TAIR:AT1G34040.1,TAIR:AT1G34060.1,TAIR:AT4G24670.1,TrEMBL:B9SED3,TrEMBL:B9SED5,TrEMBL:I1JDF6;Derives_from=GSCOCT00033708001;Name=Cc10_g15320;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0016846,GO:0030170,CC_EC_number:4.4.1.4,PRODUCT:Putative Tryptophan aminotransferase-related protein 4,CC_functional_completeness:fragment,CC_gene:TAR4,CC_gene:TAR3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033708001~ Putative Tryptophan aminotransferase-related protein 4~ TAR4~ fragment;original_location=complement(join(1162808..1162933%2C1162600..1162695%2C1162220..1162489%2C1161785..1161933%2C1161571..1161661));owner=coffea | |
| 51133 chr10 manual_curation exon 26306569 26306659 . - . Parent=GSCOCT00033708001 | |
| 51134 chr10 manual_curation exon 26306783 26306931 . - . Parent=GSCOCT00033708001 | |
| 51135 chr10 manual_curation exon 26307218 26307487 . - . Parent=GSCOCT00033708001 | |
| 51136 chr10 manual_curation exon 26307598 26307693 . - . Parent=GSCOCT00033708001 | |
| 51137 chr10 manual_curation exon 26307806 26307931 . - . Parent=GSCOCT00033708001 | |
| 51138 chr10 manual_curation CDS 26306569 26306659 . - 2 Parent=GSCOCT00033708001 | |
| 51139 chr10 manual_curation CDS 26306783 26306931 . - 0 Parent=GSCOCT00033708001 | |
| 51140 chr10 manual_curation CDS 26307218 26307487 . - 0 Parent=GSCOCT00033708001 | |
| 51141 chr10 manual_curation CDS 26307598 26307693 . - 0 Parent=GSCOCT00033708001 | |
| 51142 chr10 manual_curation CDS 26307806 26307931 . - 0 Parent=GSCOCT00033708001 | |
| 51143 chr10 manual_curation gene 26309900 26313688 . + . ID=GSCOCG00033709001;Name=Cc10_g15330 | |
| 51144 chr10 manual_curation mRNA 26309900 26313688 . + . ID=GSCOCT00033709001;Parent=GSCOCG00033709001;Name=Cc10_g15330 | |
| 51145 chr10 manual_curation polypeptide 26309900 26313450 . + . ID=GSCOCP00033709001;Dbxref=GENE3D:G3DSA:2.10.25.30,GENE3D:G3DSA:3.40.640.10,InterPro:IPR006947,InterPro:IPR006948,InterPro:IPR015421,InterPro:IPR015424,PFAM:PF04863,PFAM:PF04864,SUPERFAMILY:SSF53383,SwissProt:P31757,SwissProt:Q93Z38,SwissProt:Q9FE98,TAIR:AT1G34040.1,TAIR:AT1G34060.1,TAIR:AT4G24670.1,TrEMBL:B9GT69,TrEMBL:D7SXY9,TrEMBL:I1JDF6;Derives_from=GSCOCT00033709001;Name=Cc10_g15330;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0016846,GO:0030170,CC_EC_number:4.4.1.4,PRODUCT:Tryptophan aminotransferase-related protein 4,CC_functional_completeness:complete,CC_gene:TAR4,CC_gene:TAR3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033709001~ Tryptophan aminotransferase-related protein 4~ TAR4~ complete;original_location=join(1164902..1165194%2C1165287..1165581%2C1167217..1167503%2C1167603..1167883%2C1168076..1168452);owner=coffea | |
| 51146 chr10 manual_curation exon 26309900 26310192 . + . Parent=GSCOCT00033709001 | |
| 51147 chr10 manual_curation exon 26310285 26310579 . + . Parent=GSCOCT00033709001 | |
| 51148 chr10 manual_curation exon 26312215 26312501 . + . Parent=GSCOCT00033709001 | |
| 51149 chr10 manual_curation exon 26312601 26312881 . + . Parent=GSCOCT00033709001 | |
| 51150 chr10 manual_curation exon 26313074 26313688 . + . Parent=GSCOCT00033709001 | |
| 51151 chr10 manual_curation CDS 26309900 26310192 . + 0 Parent=GSCOCT00033709001 | |
| 51152 chr10 manual_curation CDS 26310285 26310579 . + 2 Parent=GSCOCT00033709001 | |
| 51153 chr10 manual_curation CDS 26312215 26312501 . + 0 Parent=GSCOCT00033709001 | |
| 51154 chr10 manual_curation CDS 26312601 26312881 . + 2 Parent=GSCOCT00033709001 | |
| 51155 chr10 manual_curation CDS 26313074 26313450 . + 1 Parent=GSCOCT00033709001 | |
| 51156 chr10 manual_curation gene 26315723 26318389 . - . ID=GSCOCG00033710001;Name=Cc10_g15340 | |
| 51157 chr10 manual_curation mRNA 26315723 26318389 . - . ID=GSCOCT00033710001;Parent=GSCOCG00033710001;Name=Cc10_g15340 | |
| 51158 chr10 manual_curation polypeptide 26315723 26318389 . - . ID=GSCOCP00033710001;Dbxref=GENE3D:G3DSA:2.10.25.30,GENE3D:G3DSA:3.40.640.10,GENE3D:G3DSA:3.90.1150.10,InterPro:IPR006947,InterPro:IPR006948,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,PFAM:PF04863,PFAM:PF04864,SUPERFAMILY:SSF53383,SwissProt:P31757,SwissProt:Q93Z38,SwissProt:Q9FE98,TAIR:AT1G34040.1,TAIR:AT1G34060.1,TAIR:AT4G24670.1,TrEMBL:B9SED5,TrEMBL:D7SXY9,TrEMBL:I1JDF6;Derives_from=GSCOCT00033710001;Name=Cc10_g15340;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0016846,GO:0030170,CC_EC_number:4.4.1.4,PRODUCT:Tryptophan aminotransferase-related protein 4,CC_functional_completeness:complete,CC_gene:TAR4,CC_gene:TAR3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033710001~ Tryptophan aminotransferase-related protein 4~ TAR4~ complete;original_location=complement(join(1173102..1173391%2C1172517..1172811%2C1172096..1172388%2C1171351..1171634%2C1170725..1171068));owner=coffea | |
| 51159 chr10 manual_curation exon 26315723 26316066 . - . Parent=GSCOCT00033710001 | |
| 51160 chr10 manual_curation exon 26316349 26316632 . - . Parent=GSCOCT00033710001 | |
| 51161 chr10 manual_curation exon 26317094 26317386 . - . Parent=GSCOCT00033710001 | |
| 51162 chr10 manual_curation exon 26317515 26317809 . - . Parent=GSCOCT00033710001 | |
| 51163 chr10 manual_curation exon 26318100 26318389 . - . Parent=GSCOCT00033710001 | |
| 51164 chr10 manual_curation CDS 26315723 26316066 . - 1 Parent=GSCOCT00033710001 | |
| 51165 chr10 manual_curation CDS 26316349 26316632 . - 2 Parent=GSCOCT00033710001 | |
| 51166 chr10 manual_curation CDS 26317094 26317386 . - 0 Parent=GSCOCT00033710001 | |
| 51167 chr10 manual_curation CDS 26317515 26317809 . - 2 Parent=GSCOCT00033710001 | |
| 51168 chr10 manual_curation CDS 26318100 26318389 . - 0 Parent=GSCOCT00033710001 | |
| 51169 chr10 manual_curation gene 26330014 26334503 . + . ID=GSCOCG00033712001;Name=Cc10_g15350 | |
| 51170 chr10 manual_curation mRNA 26330014 26334503 . + . ID=GSCOCT00033712001;Parent=GSCOCG00033712001;Name=Cc10_g15350 | |
| 51171 chr10 manual_curation polypeptide 26330794 26333899 . + . ID=GSCOCP00033712001;Dbxref=InterPro:IPR002573,InterPro:IPR011009,PANTHER:PTHR22603,PFAM:PF01633,SUPERFAMILY:SSF56112,SwissProt:A7MCT6,SwissProt:Q9NVF9,SwissProt:Q9Y259,TAIR:AT1G71697.1,TAIR:AT1G74320.1,TAIR:AT4G09760.2,TrEMBL:B9SED6,TrEMBL:D7SXZ1,TrEMBL:Q42810;Derives_from=GSCOCT00033712001;Name=Cc10_g15350;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.7.1.82,PRODUCT:Putative Choline/ethanolamine kinase,CC_functional_completeness:complete,CC_gene:CHKB,CC_gene:Etnk2,CC_gene:ETNK2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033712001~ Putative Choline/ethanolamine kinase~ CHKB~ complete;original_location=join(1185796..1186008%2C1186655..1186776%2C1186857..1187052%2C1187554..1187671%2C1187832..1187879%2C1188519..1188619%2C1188740..1188901);owner=coffea | |
| 51172 chr10 manual_curation exon 26330014 26330127 . + . Parent=GSCOCT00033712001 | |
| 51173 chr10 manual_curation exon 26330251 26330320 . + . Parent=GSCOCT00033712001 | |
| 51174 chr10 manual_curation exon 26330644 26331006 . + . Parent=GSCOCT00033712001 | |
| 51175 chr10 manual_curation exon 26331653 26331774 . + . Parent=GSCOCT00033712001 | |
| 51176 chr10 manual_curation exon 26331855 26332050 . + . Parent=GSCOCT00033712001 | |
| 51177 chr10 manual_curation exon 26332552 26332669 . + . Parent=GSCOCT00033712001 | |
| 51178 chr10 manual_curation exon 26332830 26332877 . + . Parent=GSCOCT00033712001 | |
| 51179 chr10 manual_curation exon 26333517 26333617 . + . Parent=GSCOCT00033712001 | |
| 51180 chr10 manual_curation exon 26333738 26334503 . + . Parent=GSCOCT00033712001 | |
| 51181 chr10 manual_curation CDS 26330794 26331006 . + 0 Parent=GSCOCT00033712001 | |
| 51182 chr10 manual_curation CDS 26331653 26331774 . + 0 Parent=GSCOCT00033712001 | |
| 51183 chr10 manual_curation CDS 26331855 26332050 . + 2 Parent=GSCOCT00033712001 | |
| 51184 chr10 manual_curation CDS 26332552 26332669 . + 0 Parent=GSCOCT00033712001 | |
| 51185 chr10 manual_curation CDS 26332830 26332877 . + 1 Parent=GSCOCT00033712001 | |
| 51186 chr10 manual_curation CDS 26333517 26333617 . + 1 Parent=GSCOCT00033712001 | |
| 51187 chr10 manual_curation CDS 26333738 26333899 . + 0 Parent=GSCOCT00033712001 | |
| 51188 chr10 manual_curation gene 26334571 26337557 . - . ID=GSCOCG00033713001;Name=Cc10_g15360 | |
| 51189 chr10 manual_curation mRNA 26334571 26337557 . - . ID=GSCOCT00033713001;Parent=GSCOCG00033713001;Name=Cc10_g15360 | |
| 51190 chr10 manual_curation polypeptide 26334618 26337520 . - . ID=GSCOCP00033713001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR002198,InterPro:IPR002347,InterPro:IPR016040,PANTHER:PTHR19410,PFAM:PF00106,PRINTS:PR00081,SwissProt:A0PJE2,SwissProt:A6QP05,SwissProt:Q8TC12,TAIR:AT4G09750.1,TAIR:AT4G11410.1,TAIR:AT5G50130.1,TrEMBL:A9PIP2,TrEMBL:B9H7X1,TrEMBL:D7LXC9;Derives_from=GSCOCT00033713001;Name=Cc10_g15360;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,GO:0016491,GO:0055114,CC_EC_number:1.1.1.184,PRODUCT:Putative Dehydrogenase/reductase SDR family member 12,CC_functional_completeness:complete,CC_gene:DHRS12,CC_gene:RDH11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033713001~ Putative Dehydrogenase/reductase SDR family member 12~ DHRS12~ complete;original_location=complement(join(1192508..1192522%2C1192335..1192396%2C1191807..1191926%2C1191586..1191685%2C1191418..1191498%2C1191234..1191283%2C1191000..1191150%2C1190873..1190929%2C1189934..1190055%2C1189620..1189830));owner=coffea | |
| 51191 chr10 manual_curation exon 26334571 26334828 . - . Parent=GSCOCT00033713001 | |
| 51192 chr10 manual_curation exon 26334932 26335053 . - . Parent=GSCOCT00033713001 | |
| 51193 chr10 manual_curation exon 26335871 26335927 . - . Parent=GSCOCT00033713001 | |
| 51194 chr10 manual_curation exon 26335998 26336148 . - . Parent=GSCOCT00033713001 | |
| 51195 chr10 manual_curation exon 26336232 26336281 . - . Parent=GSCOCT00033713001 | |
| 51196 chr10 manual_curation exon 26336416 26336496 . - . Parent=GSCOCT00033713001 | |
| 51197 chr10 manual_curation exon 26336584 26336683 . - . Parent=GSCOCT00033713001 | |
| 51198 chr10 manual_curation exon 26336805 26336924 . - . Parent=GSCOCT00033713001 | |
| 51199 chr10 manual_curation exon 26337333 26337394 . - . Parent=GSCOCT00033713001 | |
| 51200 chr10 manual_curation exon 26337506 26337557 . - . Parent=GSCOCT00033713001 | |
| 51201 chr10 manual_curation CDS 26334618 26334828 . - 2 Parent=GSCOCT00033713001 | |
| 51202 chr10 manual_curation CDS 26334932 26335053 . - 0 Parent=GSCOCT00033713001 | |
| 51203 chr10 manual_curation CDS 26335871 26335927 . - 0 Parent=GSCOCT00033713001 | |
| 51204 chr10 manual_curation CDS 26335998 26336148 . - 2 Parent=GSCOCT00033713001 | |
| 51205 chr10 manual_curation CDS 26336232 26336281 . - 0 Parent=GSCOCT00033713001 | |
| 51206 chr10 manual_curation CDS 26336416 26336496 . - 0 Parent=GSCOCT00033713001 | |
| 51207 chr10 manual_curation CDS 26336584 26336683 . - 2 Parent=GSCOCT00033713001 | |
| 51208 chr10 manual_curation CDS 26336805 26336924 . - 2 Parent=GSCOCT00033713001 | |
| 51209 chr10 manual_curation CDS 26337333 26337394 . - 0 Parent=GSCOCT00033713001 | |
| 51210 chr10 manual_curation CDS 26337506 26337520 . - 0 Parent=GSCOCT00033713001 | |
| 51211 chr10 manual_curation gene 26339755 26349922 . - . ID=GSCOCG00033715001;Name=Cc10_g15370 | |
| 51212 chr10 manual_curation mRNA 26339755 26349922 . - . ID=GSCOCT00033715001;Parent=GSCOCG00033715001;Name=Cc10_g15370 | |
| 51213 chr10 manual_curation polypeptide 26339927 26349922 . - . ID=GSCOCP00033715001;Dbxref=InterPro:IPR000300,InterPro:IPR005135,PFAM:PF03372,SMART:SM00128,SUPERFAMILY:SSF56219,SwissProt:Q84MA2,SwissProt:Q9FUR2,SwissProt:Q9LR47,TAIR:AT1G34120.2,TAIR:AT1G71710.1,TAIR:AT4G18010.1,TrEMBL:A5BUY8,TrEMBL:A8IDW2,TrEMBL:F6H6R6;Derives_from=GSCOCT00033715001;Name=Cc10_g15370;Ontology_term=CC_evidence_code:ISS,GO:0004437,CC_EC_number:3.1.3.56,PRODUCT:Type I inositol 1%2C4%2C5-trisphosphate 5-phosphatase 1,CC_functional_completeness:complete,CC_gene:IP5P1,CC_gene:IP5P2,CC_gene:CVP2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033715001~ Type I inositol 1%2C4%2C5-trisphosphate 5-phosphatase 1~ IP5P1~ complete;original_location=complement(join(1204852..1204924%2C1203004..1203068%2C1202770..1202923%2C1202559..1202633%2C1201525..1201597%2C1201289..1201393%2C1200264..1201125%2C1198534..1198718%2C1197713..1197821%2C1196973..1197112%2C1195549..1195783%2C1194929..1194952));owner=coffea | |
| 51214 chr10 manual_curation exon 26339755 26339950 . - . Parent=GSCOCT00033715001 | |
| 51215 chr10 manual_curation exon 26340547 26340781 . - . Parent=GSCOCT00033715001 | |
| 51216 chr10 manual_curation exon 26341971 26342110 . - . Parent=GSCOCT00033715001 | |
| 51217 chr10 manual_curation exon 26342711 26342819 . - . Parent=GSCOCT00033715001 | |
| 51218 chr10 manual_curation exon 26343532 26343716 . - . Parent=GSCOCT00033715001 | |
| 51219 chr10 manual_curation exon 26345262 26346123 . - . Parent=GSCOCT00033715001 | |
| 51220 chr10 manual_curation exon 26346287 26346391 . - . Parent=GSCOCT00033715001 | |
| 51221 chr10 manual_curation exon 26346523 26346595 . - . Parent=GSCOCT00033715001 | |
| 51222 chr10 manual_curation exon 26347557 26347631 . - . Parent=GSCOCT00033715001 | |
| 51223 chr10 manual_curation exon 26347768 26347921 . - . Parent=GSCOCT00033715001 | |
| 51224 chr10 manual_curation exon 26348002 26348066 . - . Parent=GSCOCT00033715001 | |
| 51225 chr10 manual_curation exon 26349850 26349922 . - . Parent=GSCOCT00033715001 | |
| 51226 chr10 manual_curation CDS 26339927 26339950 . - 0 Parent=GSCOCT00033715001 | |
| 51227 chr10 manual_curation CDS 26340547 26340781 . - 2 Parent=GSCOCT00033715001 | |
| 51228 chr10 manual_curation CDS 26341971 26342110 . - 0 Parent=GSCOCT00033715001 | |
| 51229 chr10 manual_curation CDS 26342711 26342819 . - 2 Parent=GSCOCT00033715001 | |
| 51230 chr10 manual_curation CDS 26343532 26343716 . - 0 Parent=GSCOCT00033715001 | |
| 51231 chr10 manual_curation CDS 26345262 26346123 . - 2 Parent=GSCOCT00033715001 | |
| 51232 chr10 manual_curation CDS 26346287 26346391 . - 2 Parent=GSCOCT00033715001 | |
| 51233 chr10 manual_curation CDS 26346523 26346595 . - 1 Parent=GSCOCT00033715001 | |
| 51234 chr10 manual_curation CDS 26347557 26347631 . - 1 Parent=GSCOCT00033715001 | |
| 51235 chr10 manual_curation CDS 26347768 26347921 . - 0 Parent=GSCOCT00033715001 | |
| 51236 chr10 manual_curation CDS 26348002 26348066 . - 1 Parent=GSCOCT00033715001 | |
| 51237 chr10 manual_curation CDS 26349850 26349922 . - 0 Parent=GSCOCT00033715001 | |
| 51238 chr10 manual_curation gene 26365638 26366738 . + . ID=GSCOCG00033717001;Name=Cc10_g15380 | |
| 51239 chr10 manual_curation mRNA 26365638 26366738 . + . ID=GSCOCT00033717001;Parent=GSCOCG00033717001;Name=Cc10_g15380 | |
| 51240 chr10 manual_curation polypeptide 26365638 26366738 . + . ID=GSCOCP00033717001;Dbxref=GENE3D:G3DSA:3.40.47.10,InterPro:IPR013601,InterPro:IPR013747,InterPro:IPR016038,InterPro:IPR016039,PFAM:PF08392,PFAM:PF08541,SUPERFAMILY:SSF53901,SwissProt:O65677,SwissProt:Q9LN49,SwissProt:Q9SIX1,TAIR:AT1G19440.1,TAIR:AT2G16280.1,TAIR:AT4G34510.1,TrEMBL:B4FAL7,TrEMBL:F2D021,TrEMBL:F6HJE7;Derives_from=GSCOCT00033717001;Name=Cc10_g15380;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0006633,GO:0008152,GO:0008610,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative 3-ketoacyl-CoA synthase 4,CC_functional_completeness:fragment,CC_gene:KCS4,CC_gene:KCS2,CC_gene:KCS9;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033717001~ Putative 3-ketoacyl-CoA synthase 4~ KCS4~ fragment;original_location=1220640..1221740;owner=coffea | |
| 51241 chr10 manual_curation exon 26365638 26366738 . + . Parent=GSCOCT00033717001 | |
| 51242 chr10 manual_curation CDS 26365638 26366738 . + 0 Parent=GSCOCT00033717001 | |
| 51243 chr10 manual_curation gene 26368831 26370602 . + . ID=GSCOCG00033718001;Name=Cc10_g15390 | |
| 51244 chr10 manual_curation mRNA 26368831 26370602 . + . ID=GSCOCT00033718001;Parent=GSCOCG00033718001;Name=Cc10_g15390 | |
| 51245 chr10 manual_curation polypeptide 26368831 26370602 . + . ID=GSCOCP00033718001;Dbxref=InterPro:IPR000620,PFAM:PF00892,SwissProt:Q94GB1,SwissProt:Q9FZ95,SwissProt:Q9FZ96,TAIR:AT1G28220.1,TAIR:AT1G28230.1,TAIR:AT2G33750.1,TrEMBL:A5CAM1,TrEMBL:F6H0Z3,TrEMBL:F6H0Z4;Derives_from=GSCOCT00033718001;Name=Cc10_g15390;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative Purine permease 3,CC_functional_completeness:fragment,CC_gene:PUP3,CC_gene:PUP1,CC_gene:PUP2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033718001~ Putative Purine permease 3~ PUP3~ fragment;original_location=join(1223833..1223997%2C1224049..1224254%2C1224572..1224710%2C1225422..1225604);owner=coffea | |
| 51246 chr10 manual_curation exon 26368831 26368995 . + . Parent=GSCOCT00033718001 | |
| 51247 chr10 manual_curation exon 26369047 26369252 . + . Parent=GSCOCT00033718001 | |
| 51248 chr10 manual_curation exon 26369570 26369708 . + . Parent=GSCOCT00033718001 | |
| 51249 chr10 manual_curation exon 26370420 26370602 . + . Parent=GSCOCT00033718001 | |
| 51250 chr10 manual_curation CDS 26368831 26368995 . + 0 Parent=GSCOCT00033718001 | |
| 51251 chr10 manual_curation CDS 26369047 26369252 . + 0 Parent=GSCOCT00033718001 | |
| 51252 chr10 manual_curation CDS 26369570 26369708 . + 2 Parent=GSCOCT00033718001 | |
| 51253 chr10 manual_curation CDS 26370420 26370602 . + 0 Parent=GSCOCT00033718001 | |
| 51254 chr10 manual_curation gene 26372182 26373534 . + . ID=GSCOCG00033719001;Name=Cc10_g15400 | |
| 51255 chr10 manual_curation mRNA 26372182 26373534 . + . ID=GSCOCT00033719001;Parent=GSCOCG00033719001;Name=Cc10_g15400 | |
| 51256 chr10 manual_curation polypeptide 26372262 26373401 . + . ID=GSCOCP00033719001;Dbxref=InterPro:IPR000620,InterPro:IPR004853,PFAM:PF00892,PFAM:PF03151,SwissProt:Q94GB1,SwissProt:Q9FZ95,SwissProt:Q9FZ96,TAIR:AT1G28220.1,TAIR:AT1G28230.1,TAIR:AT2G33750.1,TrEMBL:A5CAM1,TrEMBL:B9RJS5,TrEMBL:F6H0Z4;Derives_from=GSCOCT00033719001;Name=Cc10_g15400;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Purine permease 3,CC_functional_completeness:complete,CC_gene:PUP3,CC_gene:PUP1,CC_gene:PUP2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033719001~ Purine permease 3~ PUP3~ complete;original_location=join(1227264..1227980%2C1228083..1228403);owner=coffea | |
| 51257 chr10 manual_curation exon 26372182 26372978 . + . Parent=GSCOCT00033719001 | |
| 51258 chr10 manual_curation exon 26373081 26373534 . + . Parent=GSCOCT00033719001 | |
| 51259 chr10 manual_curation CDS 26372262 26372978 . + 0 Parent=GSCOCT00033719001 | |
| 51260 chr10 manual_curation CDS 26373081 26373401 . + 0 Parent=GSCOCT00033719001 | |
| 51261 chr10 manual_curation gene 26373593 26386426 . - . ID=GSCOCG00033720001;Name=Cc10_g15410 | |
| 51262 chr10 manual_curation mRNA 26373593 26386426 . - . ID=GSCOCT00033720001;Parent=GSCOCG00033720001;Name=Cc10_g15410 | |
| 51263 chr10 manual_curation polypeptide 26373854 26386158 . - . ID=GSCOCP00033720001;Dbxref=GENE3D:G3DSA:1.10.287.110,GENE3D:G3DSA:2.10.230.10,HAMAP:MF_01152,InterPro:IPR001305,InterPro:IPR001623,InterPro:IPR002939,InterPro:IPR003095,InterPro:IPR008971,InterPro:IPR012724,InterPro:IPR015609,InterPro:IPR018253,PANTHER:PTHR11821,PFAM:PF00226,PFAM:PF00684,PFAM:PF01556,PRINTS:PR00625,PROFILE:PS50076,PROFILE:PS51188,PROSITE:PS00636,SMART:SM00271,SUPERFAMILY:SSF46565,SUPERFAMILY:SSF49493,SUPERFAMILY:SSF57938,SwissProt:C4ZPU1,SwissProt:Q114R3,SwissProt:Q38813,TAIR:AT1G28210.2,TAIR:AT2G22360.1,TAIR:AT5G48030.1,TrEMBL:B9RJS6,TrEMBL:F4HWI4,TrEMBL:I1MAX7;Derives_from=GSCOCT00033720001;Name=Cc10_g15410;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006457,GO:0009408,GO:0031072,GO:0051082,CC_EC_number:missing_EC_number,PRODUCT:Chaperone protein dnaJ 1%2C mitochondrial,CC_functional_completeness:complete,CC_gene:ATJ1,CC_gene:dnaJ;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033720001~ Chaperone protein dnaJ 1%2C mitochondrial~ ATJ1~ complete;original_location=complement(join(1241104..1241160%2C1240914..1240995%2C1238453..1238539%2C1238257..1238348%2C1237027..1237110%2C1236887..1236925%2C1236677..1236793%2C1236542..1236583%2C1236352..1236439%2C1235985..1236049%2C1235761..1235823%2C1235585..1235657%2C1234781..1234872%2C1234376..1234447%2C1233060..1233116%2C1231763..1231811%2C1231600..1231669%2C1230768..1230857%2C1228856..1228883));owner=coffea | |
| 51264 chr10 manual_curation exon 26373593 26373881 . - . Parent=GSCOCT00033720001 | |
| 51265 chr10 manual_curation exon 26375766 26375855 . - . Parent=GSCOCT00033720001 | |
| 51266 chr10 manual_curation exon 26376598 26376667 . - . Parent=GSCOCT00033720001 | |
| 51267 chr10 manual_curation exon 26376761 26376809 . - . Parent=GSCOCT00033720001 | |
| 51268 chr10 manual_curation exon 26378058 26378114 . - . Parent=GSCOCT00033720001 | |
| 51269 chr10 manual_curation exon 26379374 26379445 . - . Parent=GSCOCT00033720001 | |
| 51270 chr10 manual_curation exon 26379779 26379870 . - . Parent=GSCOCT00033720001 | |
| 51271 chr10 manual_curation exon 26380583 26380655 . - . Parent=GSCOCT00033720001 | |
| 51272 chr10 manual_curation exon 26380759 26380821 . - . Parent=GSCOCT00033720001 | |
| 51273 chr10 manual_curation exon 26380983 26381047 . - . Parent=GSCOCT00033720001 | |
| 51274 chr10 manual_curation exon 26381350 26381437 . - . Parent=GSCOCT00033720001 | |
| 51275 chr10 manual_curation exon 26381540 26381581 . - . Parent=GSCOCT00033720001 | |
| 51276 chr10 manual_curation exon 26381675 26381791 . - . Parent=GSCOCT00033720001 | |
| 51277 chr10 manual_curation exon 26381885 26381923 . - . Parent=GSCOCT00033720001 | |
| 51278 chr10 manual_curation exon 26382025 26382108 . - . Parent=GSCOCT00033720001 | |
| 51279 chr10 manual_curation exon 26383255 26383346 . - . Parent=GSCOCT00033720001 | |
| 51280 chr10 manual_curation exon 26383451 26383537 . - . Parent=GSCOCT00033720001 | |
| 51281 chr10 manual_curation exon 26385912 26385993 . - . Parent=GSCOCT00033720001 | |
| 51282 chr10 manual_curation exon 26386102 26386426 . - . Parent=GSCOCT00033720001 | |
| 51283 chr10 manual_curation CDS 26373854 26373881 . - 2 Parent=GSCOCT00033720001 | |
| 51284 chr10 manual_curation CDS 26375766 26375855 . - 2 Parent=GSCOCT00033720001 | |
| 51285 chr10 manual_curation CDS 26376598 26376667 . - 1 Parent=GSCOCT00033720001 | |
| 51286 chr10 manual_curation CDS 26376761 26376809 . - 0 Parent=GSCOCT00033720001 | |
| 51287 chr10 manual_curation CDS 26378058 26378114 . - 0 Parent=GSCOCT00033720001 | |
| 51288 chr10 manual_curation CDS 26379374 26379445 . - 0 Parent=GSCOCT00033720001 | |
| 51289 chr10 manual_curation CDS 26379779 26379870 . - 1 Parent=GSCOCT00033720001 | |
| 51290 chr10 manual_curation CDS 26380583 26380655 . - 0 Parent=GSCOCT00033720001 | |
| 51291 chr10 manual_curation CDS 26380759 26380821 . - 0 Parent=GSCOCT00033720001 | |
| 51292 chr10 manual_curation CDS 26380983 26381047 . - 1 Parent=GSCOCT00033720001 | |
| 51293 chr10 manual_curation CDS 26381350 26381437 . - 0 Parent=GSCOCT00033720001 | |
| 51294 chr10 manual_curation CDS 26381540 26381581 . - 0 Parent=GSCOCT00033720001 | |
| 51295 chr10 manual_curation CDS 26381675 26381791 . - 0 Parent=GSCOCT00033720001 | |
| 51296 chr10 manual_curation CDS 26381885 26381923 . - 0 Parent=GSCOCT00033720001 | |
| 51297 chr10 manual_curation CDS 26382025 26382108 . - 0 Parent=GSCOCT00033720001 | |
| 51298 chr10 manual_curation CDS 26383255 26383346 . - 1 Parent=GSCOCT00033720001 | |
| 51299 chr10 manual_curation CDS 26383451 26383537 . - 1 Parent=GSCOCT00033720001 | |
| 51300 chr10 manual_curation CDS 26385912 26385993 . - 0 Parent=GSCOCT00033720001 | |
| 51301 chr10 manual_curation CDS 26386102 26386158 . - 0 Parent=GSCOCT00033720001 | |
| 51302 chr10 manual_curation gene 26386656 26389531 . + . ID=GSCOCG00033721001;Name=Cc10_g15420 | |
| 51303 chr10 manual_curation mRNA 26386656 26389531 . + . ID=GSCOCT00033721001;Parent=GSCOCG00033721001;Name=Cc10_g15420 | |
| 51304 chr10 manual_curation polypeptide 26386795 26389085 . + . ID=GSCOCP00033721001;Dbxref=InterPro:IPR002885,PFAM:PF01535,SwissProt:Q3E911,SwissProt:Q8LPS6,SwissProt:Q9SY07,TAIR:AT1G02150.1,TAIR:AT4G02820.1,TAIR:AT5G27460.1,TIGRFAMs:TIGR00756,TrEMBL:B9RJS7,TrEMBL:F6H0Z8,TrEMBL:I1K9T9;Derives_from=GSCOCT00033721001;Name=Cc10_g15420;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At5g27460,CC_functional_completeness:complete,CC_gene:At5g27460,CC_gene:At4g02820,CC_gene:At1g02150;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033721001~ Pentatricopeptide repeat-containing protein At5g27460~ At5g27460~ complete;original_location=join(1241797..1242123%2C1242852..1244087);owner=coffea | |
| 51305 chr10 manual_curation exon 26386656 26387121 . + . Parent=GSCOCT00033721001 | |
| 51306 chr10 manual_curation exon 26387850 26389531 . + . Parent=GSCOCT00033721001 | |
| 51307 chr10 manual_curation CDS 26386795 26387121 . + 0 Parent=GSCOCT00033721001 | |
| 51308 chr10 manual_curation CDS 26387850 26389085 . + 0 Parent=GSCOCT00033721001 | |
| 51309 chr10 manual_curation gene 26390324 26391281 . - . ID=GSCOCG00033723001;Name=Cc10_g15430 | |
| 51310 chr10 manual_curation mRNA 26390324 26391281 . - . ID=GSCOCT00033723001;Parent=GSCOCG00033723001;Name=Cc10_g15430 | |
| 51311 chr10 manual_curation polypeptide 26390324 26391230 . - . ID=GSCOCP00033723001;Dbxref=GENE3D:G3DSA:1.20.1050.10,GENE3D:G3DSA:3.40.30.10,InterPro:IPR004045,InterPro:IPR004046,InterPro:IPR010987,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR017933,PFAM:PF00043,PFAM:PF02798,PROFILE:PS50404,PROFILE:PS50405,SUPERFAMILY:SSF47616,SUPERFAMILY:SSF52833,SwissProt:P32110,SwissProt:Q9FQA3,SwissProt:Q9ZW24,TAIR:AT2G29420.1,TAIR:AT2G29460.1,TAIR:AT3G09270.1,TrEMBL:D2WL57,TrEMBL:I1JV97,TrEMBL:Q9FT21;Derives_from=GSCOCT00033723001;Name=Cc10_g15430;Ontology_term=CC_evidence_code:ISS,CC_EC_number:4.4.1.5,PRODUCT:Putative Glutathione transferase GST 23,CC_functional_completeness:complete,CC_gene:HSP26-A,CC_gene:GSTU7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033723001~ Putative Glutathione transferase GST 23~ HSP26-A~ complete;original_location=complement(join(1245918..1246232%2C1245326..1245685));owner=coffea | |
| 51312 chr10 manual_curation exon 26390324 26390683 . - . Parent=GSCOCT00033723001 | |
| 51313 chr10 manual_curation exon 26390916 26391281 . - . Parent=GSCOCT00033723001 | |
| 51314 chr10 manual_curation CDS 26390324 26390683 . - 0 Parent=GSCOCT00033723001 | |
| 51315 chr10 manual_curation CDS 26390916 26391230 . - 0 Parent=GSCOCT00033723001 | |
| 51316 chr10 manual_curation gene 26391900 26395841 . - . ID=GSCOCG00033724001;Name=Cc10_g15440 | |
| 51317 chr10 manual_curation mRNA 26391900 26395841 . - . ID=GSCOCT00033724001;Parent=GSCOCG00033724001;Name=Cc10_g15440 | |
| 51318 chr10 manual_curation polypeptide 26392208 26395841 . - . ID=GSCOCP00033724001;Dbxref=GENE3D:G3DSA:3.30.470.20,HAMAP:MF_00137,InterPro:IPR001636,InterPro:IPR013816,InterPro:IPR018236,PANTHER:PTHR11609,PFAM:PF01259,PROSITE:PS01057,PROSITE:PS01058,SwissProt:P38025,SwissProt:Q07463,SwissProt:Q5WW20,TAIR:AT3G21110.1,TrEMBL:I1JGX0,TrEMBL:Q6T7F0,TrEMBL:Q8VZW9;Derives_from=GSCOCT00033724001;Name=Cc10_g15440;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004639,GO:0005524,GO:0006164,CC_EC_number:6.3.2.6,PRODUCT:Phosphoribosylaminoimidazole-succinocarboxamide synthase%2C chloroplastic,CC_functional_completeness:complete,CC_gene:PUR7,CC_gene:purC;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033724001~ Phosphoribosylaminoimidazole-succinocarboxamide synthase%2C chloroplastic~ PUR7~ complete;original_location=complement(join(1250505..1250843%2C1249929..1250030%2C1249711..1249840%2C1249383..1249475%2C1249213..1249301%2C1248787..1248867%2C1248220..1248309%2C1247991..1248080%2C1247697..1247747%2C1247554..1247600%2C1247347..1247404%2C1247210..1247269));owner=coffea | |
| 51319 chr10 manual_curation exon 26391900 26392267 . - . Parent=GSCOCT00033724001 | |
| 51320 chr10 manual_curation exon 26392345 26392402 . - . Parent=GSCOCT00033724001 | |
| 51321 chr10 manual_curation exon 26392552 26392598 . - . Parent=GSCOCT00033724001 | |
| 51322 chr10 manual_curation exon 26392695 26392745 . - . Parent=GSCOCT00033724001 | |
| 51323 chr10 manual_curation exon 26392989 26393078 . - . Parent=GSCOCT00033724001 | |
| 51324 chr10 manual_curation exon 26393218 26393307 . - . Parent=GSCOCT00033724001 | |
| 51325 chr10 manual_curation exon 26393785 26393865 . - . Parent=GSCOCT00033724001 | |
| 51326 chr10 manual_curation exon 26394211 26394299 . - . Parent=GSCOCT00033724001 | |
| 51327 chr10 manual_curation exon 26394381 26394473 . - . Parent=GSCOCT00033724001 | |
| 51328 chr10 manual_curation exon 26394709 26394838 . - . Parent=GSCOCT00033724001 | |
| 51329 chr10 manual_curation exon 26394927 26395028 . - . Parent=GSCOCT00033724001 | |
| 51330 chr10 manual_curation exon 26395503 26395841 . - . Parent=GSCOCT00033724001 | |
| 51331 chr10 manual_curation CDS 26392208 26392267 . - 0 Parent=GSCOCT00033724001 | |
| 51332 chr10 manual_curation CDS 26392345 26392402 . - 2 Parent=GSCOCT00033724001 | |
| 51333 chr10 manual_curation CDS 26392552 26392598 . - 0 Parent=GSCOCT00033724001 | |
| 51334 chr10 manual_curation CDS 26392695 26392745 . - 0 Parent=GSCOCT00033724001 | |
| 51335 chr10 manual_curation CDS 26392989 26393078 . - 0 Parent=GSCOCT00033724001 | |
| 51336 chr10 manual_curation CDS 26393218 26393307 . - 0 Parent=GSCOCT00033724001 | |
| 51337 chr10 manual_curation CDS 26393785 26393865 . - 0 Parent=GSCOCT00033724001 | |
| 51338 chr10 manual_curation CDS 26394211 26394299 . - 1 Parent=GSCOCT00033724001 | |
| 51339 chr10 manual_curation CDS 26394381 26394473 . - 1 Parent=GSCOCT00033724001 | |
| 51340 chr10 manual_curation CDS 26394709 26394838 . - 0 Parent=GSCOCT00033724001 | |
| 51341 chr10 manual_curation CDS 26394927 26395028 . - 0 Parent=GSCOCT00033724001 | |
| 51342 chr10 manual_curation CDS 26395503 26395841 . - 0 Parent=GSCOCT00033724001 | |
| 51343 chr10 manual_curation gene 26395894 26402478 . - . ID=GSCOCG00033725001;Name=Cc10_g15450 | |
| 51344 chr10 manual_curation mRNA 26395894 26402478 . - . ID=GSCOCT00033725001;Parent=GSCOCG00033725001;Name=Cc10_g15450 | |
| 51345 chr10 manual_curation polypeptide 26395894 26402478 . - . ID=GSCOCP00033725001;Derives_from=GSCOCT00033725001;Name=Cc10_g15450;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033725001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1257164..1257480%2C1252073..1252574%2C1250896..1250979));owner=coffea | |
| 51346 chr10 manual_curation exon 26395894 26395977 . - . Parent=GSCOCT00033725001 | |
| 51347 chr10 manual_curation exon 26397071 26397572 . - . Parent=GSCOCT00033725001 | |
| 51348 chr10 manual_curation exon 26402162 26402478 . - . Parent=GSCOCT00033725001 | |
| 51349 chr10 manual_curation CDS 26395894 26395977 . - 0 Parent=GSCOCT00033725001 | |
| 51350 chr10 manual_curation CDS 26397071 26397572 . - 2 Parent=GSCOCT00033725001 | |
| 51351 chr10 manual_curation CDS 26402162 26402478 . - 0 Parent=GSCOCT00033725001 | |
| 51352 chr10 manual_curation gene 26402609 26404444 . - . ID=GSCOCG00033726001;Name=Cc10_g15460 | |
| 51353 chr10 manual_curation mRNA 26402609 26404444 . - . ID=GSCOCT00033726001;Parent=GSCOCG00033726001;Name=Cc10_g15460 | |
| 51354 chr10 manual_curation polypeptide 26402825 26404444 . - . ID=GSCOCP00033726001;Dbxref=GENE3D:G3DSA:1.20.1050.10,GENE3D:G3DSA:3.40.30.10,InterPro:IPR004045,InterPro:IPR004046,InterPro:IPR010987,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR017933,PFAM:PF00043,PFAM:PF02798,PROFILE:PS50404,PROFILE:PS50405,SUPERFAMILY:SSF47616,SUPERFAMILY:SSF52833,SwissProt:P32110,SwissProt:Q9FQA3,SwissProt:Q9ZW27,TAIR:AT2G29420.1,TAIR:AT2G29460.1,TAIR:AT3G09270.1,TrEMBL:D2WL57,TrEMBL:I1JV97,TrEMBL:Q9FT21;Derives_from=GSCOCT00033726001;Name=Cc10_g15460;Ontology_term=CC_evidence_code:ISS,CC_EC_number:4.4.1.5,PRODUCT:Probable glutathione S-transferase,CC_functional_completeness:complete,CC_gene:HSP26-A,CC_gene:GSTU4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033726001~ Probable glutathione S-transferase~ HSP26-A~ complete;original_location=complement(join(1259348..1259446%2C1258870..1259193%2C1257827..1258186));owner=coffea | |
| 51355 chr10 manual_curation exon 26402609 26403184 . - . Parent=GSCOCT00033726001 | |
| 51356 chr10 manual_curation exon 26403868 26404191 . - . Parent=GSCOCT00033726001 | |
| 51357 chr10 manual_curation exon 26404346 26404444 . - . Parent=GSCOCT00033726001 | |
| 51358 chr10 manual_curation CDS 26402825 26403184 . - 0 Parent=GSCOCT00033726001 | |
| 51359 chr10 manual_curation CDS 26403868 26404191 . - 0 Parent=GSCOCT00033726001 | |
| 51360 chr10 manual_curation CDS 26404346 26404444 . - 0 Parent=GSCOCT00033726001 | |
| 51361 chr10 manual_curation gene 26406968 26411356 . - . ID=GSCOCG00033728001;Name=Cc10_g15470 | |
| 51362 chr10 manual_curation mRNA 26406968 26411356 . - . ID=GSCOCT00033728001;Parent=GSCOCG00033728001;Name=Cc10_g15470 | |
| 51363 chr10 manual_curation polypeptide 26407460 26411150 . - . ID=GSCOCP00033728001;Dbxref=GENE3D:G3DSA:3.30.470.20,HAMAP:MF_00137,InterPro:IPR001636,InterPro:IPR013816,InterPro:IPR018236,PANTHER:PTHR11609,PFAM:PF01259,PROSITE:PS01057,PROSITE:PS01058,SwissProt:P38025,SwissProt:Q07463,SwissProt:Q5WW20,TAIR:AT3G21110.1,TrEMBL:G7KBE2,TrEMBL:Q6T7F0,TrEMBL:Q8VZW9;Derives_from=GSCOCT00033728001;Name=Cc10_g15470;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004639,GO:0005524,GO:0006164,CC_EC_number:6.3.2.6,PRODUCT:Phosphoribosylaminoimidazole-succinocarboxamide synthase%2C chloroplastic,CC_functional_completeness:complete,CC_gene:PUR7,CC_gene:purC;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033728001~ Phosphoribosylaminoimidazole-succinocarboxamide synthase%2C chloroplastic~ PUR7~ complete;original_location=complement(join(1265814..1266152%2C1265208..1265309%2C1264990..1265119%2C1264663..1264755%2C1264493..1264581%2C1264064..1264144%2C1263480..1263569%2C1263237..1263326%2C1262948..1262998%2C1262805..1262851%2C1262599..1262656%2C1262462..1262521));owner=coffea | |
| 51364 chr10 manual_curation exon 26406968 26407519 . - . Parent=GSCOCT00033728001 | |
| 51365 chr10 manual_curation exon 26407597 26407654 . - . Parent=GSCOCT00033728001 | |
| 51366 chr10 manual_curation exon 26407803 26407849 . - . Parent=GSCOCT00033728001 | |
| 51367 chr10 manual_curation exon 26407946 26407996 . - . Parent=GSCOCT00033728001 | |
| 51368 chr10 manual_curation exon 26408235 26408324 . - . Parent=GSCOCT00033728001 | |
| 51369 chr10 manual_curation exon 26408478 26408567 . - . Parent=GSCOCT00033728001 | |
| 51370 chr10 manual_curation exon 26409062 26409142 . - . Parent=GSCOCT00033728001 | |
| 51371 chr10 manual_curation exon 26409491 26409579 . - . Parent=GSCOCT00033728001 | |
| 51372 chr10 manual_curation exon 26409661 26409753 . - . Parent=GSCOCT00033728001 | |
| 51373 chr10 manual_curation exon 26409988 26410117 . - . Parent=GSCOCT00033728001 | |
| 51374 chr10 manual_curation exon 26410206 26410307 . - . Parent=GSCOCT00033728001 | |
| 51375 chr10 manual_curation exon 26410812 26411356 . - . Parent=GSCOCT00033728001 | |
| 51376 chr10 manual_curation CDS 26407460 26407519 . - 0 Parent=GSCOCT00033728001 | |
| 51377 chr10 manual_curation CDS 26407597 26407654 . - 2 Parent=GSCOCT00033728001 | |
| 51378 chr10 manual_curation CDS 26407803 26407849 . - 0 Parent=GSCOCT00033728001 | |
| 51379 chr10 manual_curation CDS 26407946 26407996 . - 0 Parent=GSCOCT00033728001 | |
| 51380 chr10 manual_curation CDS 26408235 26408324 . - 0 Parent=GSCOCT00033728001 | |
| 51381 chr10 manual_curation CDS 26408478 26408567 . - 0 Parent=GSCOCT00033728001 | |
| 51382 chr10 manual_curation CDS 26409062 26409142 . - 0 Parent=GSCOCT00033728001 | |
| 51383 chr10 manual_curation CDS 26409491 26409579 . - 1 Parent=GSCOCT00033728001 | |
| 51384 chr10 manual_curation CDS 26409661 26409753 . - 1 Parent=GSCOCT00033728001 | |
| 51385 chr10 manual_curation CDS 26409988 26410117 . - 0 Parent=GSCOCT00033728001 | |
| 51386 chr10 manual_curation CDS 26410206 26410307 . - 0 Parent=GSCOCT00033728001 | |
| 51387 chr10 manual_curation CDS 26410812 26411150 . - 0 Parent=GSCOCT00033728001 | |
| 51388 chr10 manual_curation gene 26414505 26418505 . + . ID=GSCOCG00033730001;Name=Cc10_g15480 | |
| 51389 chr10 manual_curation mRNA 26414505 26418505 . + . ID=GSCOCT00033730001;Parent=GSCOCG00033730001;Name=Cc10_g15480 | |
| 51390 chr10 manual_curation polypeptide 26415161 26418155 . + . ID=GSCOCP00033730001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,InterPro:IPR020636,InterPro:IPR020642,PANTHER:PTHR22982,PANTHER:PTHR22982:SF13,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q8RWL2,SwissProt:Q8W490,SwissProt:Q9ZV15,TAIR:AT1G12580.1,TAIR:AT1G12680.1,TAIR:AT1G76040.2,TrEMBL:B9H5H9,TrEMBL:F6H102,TrEMBL:I1JV96;Derives_from=GSCOCT00033730001;Name=Cc10_g15480;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.17,PRODUCT:Serine/threonine-protein kinase PEPKR2,CC_functional_completeness:complete,CC_gene:PEPKR2,CC_gene:CPK29,CC_gene:CPK20;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033730001~ Serine/threonine-protein kinase PEPKR2~ PEPKR2~ complete;original_location=join(1270163..1270940%2C1272214..1272510%2C1272787..1273157);owner=coffea | |
| 51391 chr10 manual_curation exon 26414505 26414888 . + . Parent=GSCOCT00033730001 | |
| 51392 chr10 manual_curation exon 26415096 26415938 . + . Parent=GSCOCT00033730001 | |
| 51393 chr10 manual_curation exon 26417212 26417508 . + . Parent=GSCOCT00033730001 | |
| 51394 chr10 manual_curation exon 26417785 26418505 . + . Parent=GSCOCT00033730001 | |
| 51395 chr10 manual_curation CDS 26415161 26415938 . + 0 Parent=GSCOCT00033730001 | |
| 51396 chr10 manual_curation CDS 26417212 26417508 . + 1 Parent=GSCOCT00033730001 | |
| 51397 chr10 manual_curation CDS 26417785 26418155 . + 1 Parent=GSCOCT00033730001 | |
| 51398 chr10 manual_curation gene 26419242 26420925 . + . ID=GSCOCG00033731001;Name=Cc10_g15490 | |
| 51399 chr10 manual_curation mRNA 26419242 26420925 . + . ID=GSCOCT00033731001;Parent=GSCOCG00033731001;Name=Cc10_g15490 | |
| 51400 chr10 manual_curation polypeptide 26419242 26420925 . + . ID=GSCOCP00033731001;Dbxref=TAIR:AT4G33590.1,TAIR:AT4G33600.1,TrEMBL:B9GV16,TrEMBL:B9IJB4,TrEMBL:B9RJT2;Derives_from=GSCOCT00033731001;Name=Cc10_g15490;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033731001~ Putative unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G33600.1)%3B Has 126 Blast hits to 126 proteins in 35 species: Archae - 0%3B Bacteria - 12%3B Metazoa - 0%3B Fungi - 21%3B Plants - 62%3B Viruses - 0%3B Other Eukaryotes - 31 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(1274244..1275272%2C1275520..1275927);owner=coffea | |
| 51401 chr10 manual_curation exon 26419242 26420270 . + . Parent=GSCOCT00033731001 | |
| 51402 chr10 manual_curation exon 26420518 26420925 . + . Parent=GSCOCT00033731001 | |
| 51403 chr10 manual_curation CDS 26419242 26420270 . + 0 Parent=GSCOCT00033731001 | |
| 51404 chr10 manual_curation CDS 26420518 26420925 . + 0 Parent=GSCOCT00033731001 | |
| 51405 chr10 manual_curation gene 26421002 26423725 . - . ID=GSCOCG00033732001;Name=Cc10_g15500 | |
| 51406 chr10 manual_curation mRNA 26421002 26423725 . - . ID=GSCOCT00033732001;Parent=GSCOCG00033732001;Name=Cc10_g15500 | |
| 51407 chr10 manual_curation polypeptide 26421379 26423544 . - . ID=GSCOCP00033732001;Dbxref=InterPro:IPR000727,PROFILE:PS50192,SwissProt:Q8L9S0,SwissProt:Q8VXX9,TAIR:AT1G29060.1,TAIR:AT4G14600.1,TrEMBL:B9GV17,TrEMBL:B9H6Y2,TrEMBL:E0CRS3;Derives_from=GSCOCT00033732001;Name=Cc10_g15500;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Bet1-like protein At4g14600,CC_functional_completeness:complete,CC_gene:At4g14600,CC_gene:At1g29060;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033732001~ Bet1-like protein At4g14600~ At4g14600~ complete;original_location=complement(join(1278488..1278546%2C1278221..1278344%2C1276869..1276925%2C1276381..1276542));owner=coffea | |
| 51408 chr10 manual_curation exon 26421002 26421540 . - . Parent=GSCOCT00033732001 | |
| 51409 chr10 manual_curation exon 26421867 26421923 . - . Parent=GSCOCT00033732001 | |
| 51410 chr10 manual_curation exon 26423219 26423342 . - . Parent=GSCOCT00033732001 | |
| 51411 chr10 manual_curation exon 26423486 26423725 . - . Parent=GSCOCT00033732001 | |
| 51412 chr10 manual_curation CDS 26421379 26421540 . - 0 Parent=GSCOCT00033732001 | |
| 51413 chr10 manual_curation CDS 26421867 26421923 . - 0 Parent=GSCOCT00033732001 | |
| 51414 chr10 manual_curation CDS 26423219 26423342 . - 2 Parent=GSCOCT00033732001 | |
| 51415 chr10 manual_curation CDS 26423486 26423544 . - 0 Parent=GSCOCT00033732001 | |
| 51416 chr10 manual_curation gene 26425719 26428282 . + . ID=GSCOCG00033733001;Name=Cc10_g15510 | |
| 51417 chr10 manual_curation mRNA 26425719 26428282 . + . ID=GSCOCT00033733001;Parent=GSCOCG00033733001;Name=Cc10_g15510 | |
| 51418 chr10 manual_curation polypeptide 26426093 26428234 . + . ID=GSCOCP00033733001;Dbxref=InterPro:IPR005645,PFAM:PF03959,SwissProt:P36591,SwissProt:Q7QBJ0,SwissProt:Q94AC1,TAIR:AT1G09280.1,TAIR:AT4G24380.1,TAIR:AT5G65400.1,TrEMBL:G7KBG3,TrEMBL:I1JGX4,TrEMBL:I1MAY2;Derives_from=GSCOCT00033733001;Name=Cc10_g15510;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative UPF0483 protein AGAP003155,CC_functional_completeness:fragment,CC_gene:AGAP003155,CC_gene:STR6,CC_gene:dfr1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033733001~ Putative UPF0483 protein AGAP003155~ AGAP003155~ fragment;original_location=join(1281095..1281319%2C1281421..1281519%2C1281745..1281786%2C1281894..1282023%2C1282934..1283035%2C1283133..1283236);owner=coffea | |
| 51419 chr10 manual_curation exon 26425719 26426317 . + . Parent=GSCOCT00033733001 | |
| 51420 chr10 manual_curation exon 26426419 26426517 . + . Parent=GSCOCT00033733001 | |
| 51421 chr10 manual_curation exon 26426743 26426784 . + . Parent=GSCOCT00033733001 | |
| 51422 chr10 manual_curation exon 26426892 26427021 . + . Parent=GSCOCT00033733001 | |
| 51423 chr10 manual_curation exon 26427932 26428033 . + . Parent=GSCOCT00033733001 | |
| 51424 chr10 manual_curation exon 26428131 26428282 . + . Parent=GSCOCT00033733001 | |
| 51425 chr10 manual_curation CDS 26426093 26426317 . + 0 Parent=GSCOCT00033733001 | |
| 51426 chr10 manual_curation CDS 26426419 26426517 . + 0 Parent=GSCOCT00033733001 | |
| 51427 chr10 manual_curation CDS 26426743 26426784 . + 0 Parent=GSCOCT00033733001 | |
| 51428 chr10 manual_curation CDS 26426892 26427021 . + 0 Parent=GSCOCT00033733001 | |
| 51429 chr10 manual_curation CDS 26427932 26428033 . + 1 Parent=GSCOCT00033733001 | |
| 51430 chr10 manual_curation CDS 26428131 26428234 . + 1 Parent=GSCOCT00033733001 | |
| 51431 chr10 manual_curation gene 26439451 26443214 . - . ID=GSCOCG00033734001;Name=Cc10_g15520 | |
| 51432 chr10 manual_curation mRNA 26439451 26443214 . - . ID=GSCOCT00033734001;Parent=GSCOCG00033734001;Name=Cc10_g15520 | |
| 51433 chr10 manual_curation polypeptide 26440543 26443214 . - . ID=GSCOCP00033734001;Dbxref=InterPro:IPR006553,SMART:SM00367,SwissProt:Q8RWQ8,SwissProt:Q9LPW7,SwissProt:Q9LTX2,TAIR:AT1G12820.1,TAIR:AT4G24390.2,TAIR:AT5G49980.1,TrEMBL:A5AZ08,TrEMBL:B9H6Y0,TrEMBL:D0VLQ3;Derives_from=GSCOCT00033734001;Name=Cc10_g15520;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Transport inhibitor response 1-like protein,CC_functional_completeness:complete,CC_gene:At5g49980,CC_gene:FBX14,CC_gene:AFB3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033734001~ Transport inhibitor response 1-like protein~ At5g49980~ complete;original_location=complement(join(1297591..1298216%2C1296420..1296921%2C1295545..1296345));owner=coffea | |
| 51434 chr10 manual_curation exon 26439451 26441343 . - . Parent=GSCOCT00033734001 | |
| 51435 chr10 manual_curation exon 26441418 26441919 . - . Parent=GSCOCT00033734001 | |
| 51436 chr10 manual_curation exon 26442589 26443214 . - . Parent=GSCOCT00033734001 | |
| 51437 chr10 manual_curation CDS 26440543 26441343 . - 0 Parent=GSCOCT00033734001 | |
| 51438 chr10 manual_curation CDS 26441418 26441919 . - 2 Parent=GSCOCT00033734001 | |
| 51439 chr10 manual_curation CDS 26442589 26443214 . - 0 Parent=GSCOCT00033734001 | |
| 51440 chr10 manual_curation gene 26452939 26456273 . + . ID=GSCOCG00033736001;Name=Cc10_g15530 | |
| 51441 chr10 manual_curation mRNA 26452939 26456273 . + . ID=GSCOCT00033736001;Parent=GSCOCG00033736001;Name=Cc10_g15530 | |
| 51442 chr10 manual_curation polypeptide 26453180 26455806 . + . ID=GSCOCP00033736001;Dbxref=InterPro:IPR004182,PFAM:PF02893,SMART:SM00568,SwissProt:Q8S8F8,SwissProt:Q9M063,SwissProt:Q9SE96,TAIR:AT1G28200.1,TAIR:AT2G22475.1,TAIR:AT4G40100.1,TrEMBL:B9GV21,TrEMBL:B9H6X9,TrEMBL:C6TKQ1;Derives_from=GSCOCT00033736001;Name=Cc10_g15530;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:GEM-like protein 1,CC_functional_completeness:complete,CC_gene:FIP1,CC_gene:GEM,CC_gene:At4g40100;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033736001~ GEM-like protein 1~ FIP1~ complete;original_location=join(1308182..1308362%2C1308438..1308539%2C1308799..1308900%2C1309825..1310096%2C1310620..1310808);owner=coffea | |
| 51443 chr10 manual_curation exon 26452939 26453360 . + . Parent=GSCOCT00033736001 | |
| 51444 chr10 manual_curation exon 26453436 26453537 . + . Parent=GSCOCT00033736001 | |
| 51445 chr10 manual_curation exon 26453797 26453898 . + . Parent=GSCOCT00033736001 | |
| 51446 chr10 manual_curation exon 26454823 26455094 . + . Parent=GSCOCT00033736001 | |
| 51447 chr10 manual_curation exon 26455618 26456273 . + . Parent=GSCOCT00033736001 | |
| 51448 chr10 manual_curation CDS 26453180 26453360 . + 0 Parent=GSCOCT00033736001 | |
| 51449 chr10 manual_curation CDS 26453436 26453537 . + 1 Parent=GSCOCT00033736001 | |
| 51450 chr10 manual_curation CDS 26453797 26453898 . + 1 Parent=GSCOCT00033736001 | |
| 51451 chr10 manual_curation CDS 26454823 26455094 . + 1 Parent=GSCOCT00033736001 | |
| 51452 chr10 manual_curation CDS 26455618 26455806 . + 0 Parent=GSCOCT00033736001 | |
| 51453 chr10 manual_curation gene 26470311 26471958 . + . ID=GSCOCG00033738001;Name=Cc10_g15540 | |
| 51454 chr10 manual_curation mRNA 26470311 26471958 . + . ID=GSCOCT00033738001;Parent=GSCOCG00033738001;Name=Cc10_g15540 | |
| 51455 chr10 manual_curation polypeptide 26470752 26471558 . + . ID=GSCOCP00033738001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR006455,InterPro:IPR006456,InterPro:IPR012287,PFAM:PF04770,PRODOM:PD125774,SwissProt:Q9FKP8,SwissProt:Q9SB61,SwissProt:Q9SEZ1,TAIR:AT1G14440.1,TAIR:AT4G24660.1,TAIR:AT5G65410.1,TIGRFAMs:TIGR01565,TIGRFAMs:TIGR01566,TrEMBL:B0LK12,TrEMBL:I1K9P4,TrEMBL:Q9ARE4;Derives_from=GSCOCT00033738001;Name=Cc10_g15540;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:ZF-HD homeobox protein At5g65410,CC_functional_completeness:fragment,CC_gene:At4g24660,CC_gene:At5g65410,CC_gene:HB29;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033738001~ ZF-HD homeobox protein At5g65410~ At4g24660~ fragment;original_location=1325754..1326560;owner=coffea | |
| 51456 chr10 manual_curation exon 26470311 26471958 . + . Parent=GSCOCT00033738001 | |
| 51457 chr10 manual_curation CDS 26470752 26471558 . + 0 Parent=GSCOCT00033738001 | |
| 51458 chr10 manual_curation gene 26497637 26499209 . - . ID=GSCOCG00033741001;Name=Cc10_g15550 | |
| 51459 chr10 manual_curation mRNA 26497637 26499209 . - . ID=GSCOCT00033741001;Parent=GSCOCG00033741001;Name=Cc10_g15550 | |
| 51460 chr10 manual_curation polypeptide 26498139 26498902 . - . ID=GSCOCP00033741001;Dbxref=TrEMBL:B9H6X5,TrEMBL:B9RJU2,TrEMBL:I1MAY6;Derives_from=GSCOCT00033741001;Name=Cc10_g15550;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Predicted protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033741001~ Putative Predicted protein~ unknown_gene~ complete;original_location=complement(join(1353744..1353904%2C1353141..1353591));owner=coffea | |
| 51461 chr10 manual_curation exon 26497637 26498589 . - . Parent=GSCOCT00033741001 | |
| 51462 chr10 manual_curation exon 26498742 26499209 . - . Parent=GSCOCT00033741001 | |
| 51463 chr10 manual_curation CDS 26498139 26498589 . - 2 Parent=GSCOCT00033741001 | |
| 51464 chr10 manual_curation CDS 26498742 26498902 . - 0 Parent=GSCOCT00033741001 | |
| 51465 chr10 manual_curation gene 26503710 26508266 . - . ID=GSCOCG00033742001;Name=Cc10_g15560 | |
| 51466 chr10 manual_curation mRNA 26503710 26508266 . - . ID=GSCOCT00033742001;Parent=GSCOCG00033742001;Name=Cc10_g15560 | |
| 51467 chr10 manual_curation polypeptide 26504404 26508266 . - . ID=GSCOCP00033742001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019781,InterPro:IPR019782,PFAM:PF00400,PROFILE:PS50082,PROFILE:PS50294,SMART:SM00320,SUPERFAMILY:SSF50978,SwissProt:O94527,SwissProt:Q80ZK9,SwissProt:Q8N5D0,TAIR:AT3G45620.2,TAIR:AT4G35140.1,TAIR:AT5G10940.1,TrEMBL:B9H6X4,TrEMBL:B9RJU3,TrEMBL:F6H108;Derives_from=GSCOCT00033742001;Name=Cc10_g15560;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:transducin family protein / WD-40 repeat family protein,CC_functional_completeness:fragment,CC_gene:WDTC1,CC_gene:Wdtc1,CC_gene:SPBC609.03;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033742001~ transducin family protein / WD-40 repeat family protein~ WDTC1~ fragment;original_location=complement(join(1363185..1363268%2C1362967..1363078%2C1361839..1362188%2C1361286..1361376%2C1360509..1360604%2C1360300..1360370%2C1360090..1360217%2C1359406..1359487));owner=coffea | |
| 51468 chr10 manual_curation exon 26503710 26504485 . - . Parent=GSCOCT00033742001 | |
| 51469 chr10 manual_curation exon 26505088 26505215 . - . Parent=GSCOCT00033742001 | |
| 51470 chr10 manual_curation exon 26505298 26505368 . - . Parent=GSCOCT00033742001 | |
| 51471 chr10 manual_curation exon 26505507 26505602 . - . Parent=GSCOCT00033742001 | |
| 51472 chr10 manual_curation exon 26506284 26506374 . - . Parent=GSCOCT00033742001 | |
| 51473 chr10 manual_curation exon 26506837 26507186 . - . Parent=GSCOCT00033742001 | |
| 51474 chr10 manual_curation exon 26507965 26508076 . - . Parent=GSCOCT00033742001 | |
| 51475 chr10 manual_curation exon 26508183 26508266 . - . Parent=GSCOCT00033742001 | |
| 51476 chr10 manual_curation CDS 26504404 26504485 . - 2 Parent=GSCOCT00033742001 | |
| 51477 chr10 manual_curation CDS 26505088 26505215 . - 0 Parent=GSCOCT00033742001 | |
| 51478 chr10 manual_curation CDS 26505298 26505368 . - 1 Parent=GSCOCT00033742001 | |
| 51479 chr10 manual_curation CDS 26505507 26505602 . - 1 Parent=GSCOCT00033742001 | |
| 51480 chr10 manual_curation CDS 26506284 26506374 . - 0 Parent=GSCOCT00033742001 | |
| 51481 chr10 manual_curation CDS 26506837 26507186 . - 1 Parent=GSCOCT00033742001 | |
| 51482 chr10 manual_curation CDS 26507965 26508076 . - 0 Parent=GSCOCT00033742001 | |
| 51483 chr10 manual_curation CDS 26508183 26508266 . - 0 Parent=GSCOCT00033742001 | |
| 51484 chr10 manual_curation gene 26508568 26516505 . - . ID=GSCOCG00033743001;Name=Cc10_g15570 | |
| 51485 chr10 manual_curation mRNA 26508568 26516505 . - . ID=GSCOCT00033743001;Parent=GSCOCG00033743001;Name=Cc10_g15570 | |
| 51486 chr10 manual_curation polypeptide 26508568 26516157 . - . ID=GSCOCP00033743001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019781,InterPro:IPR019782,PFAM:PF00400,PROFILE:PS50082,PROFILE:PS50294,SMART:SM00320,SUPERFAMILY:SSF50978,SwissProt:O94527,SwissProt:Q80ZK9,SwissProt:Q8N5D0,TAIR:AT3G45620.2,TAIR:AT4G35140.1,TAIR:AT5G10940.1,TrEMBL:B9H6X4,TrEMBL:B9RJU3,TrEMBL:G7J574;Derives_from=GSCOCT00033743001;Name=Cc10_g15570;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative WD and tetratricopeptide repeats protein 1,CC_functional_completeness:fragment,CC_gene:WDTC1,CC_gene:Wdtc1,CC_gene:SPBC609.03;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033743001~ Putative WD and tetratricopeptide repeats protein 1~ WDTC1~ fragment;original_location=complement(join(1371088..1371159%2C1369355..1369423%2C1368920..1368997%2C1367401..1367535%2C1367213..1367320%2C1366945..1367073%2C1366270..1366385%2C1366069..1366186%2C1364881..1364986%2C1364068..1364210%2C1363782..1363952%2C1363570..1363695));owner=coffea | |
| 51487 chr10 manual_curation exon 26508568 26508693 . - . Parent=GSCOCT00033743001 | |
| 51488 chr10 manual_curation exon 26508780 26508950 . - . Parent=GSCOCT00033743001 | |
| 51489 chr10 manual_curation exon 26509066 26509208 . - . Parent=GSCOCT00033743001 | |
| 51490 chr10 manual_curation exon 26509879 26509984 . - . Parent=GSCOCT00033743001 | |
| 51491 chr10 manual_curation exon 26511067 26511184 . - . Parent=GSCOCT00033743001 | |
| 51492 chr10 manual_curation exon 26511268 26511383 . - . Parent=GSCOCT00033743001 | |
| 51493 chr10 manual_curation exon 26511943 26512071 . - . Parent=GSCOCT00033743001 | |
| 51494 chr10 manual_curation exon 26512211 26512318 . - . Parent=GSCOCT00033743001 | |
| 51495 chr10 manual_curation exon 26512399 26512533 . - . Parent=GSCOCT00033743001 | |
| 51496 chr10 manual_curation exon 26513918 26513995 . - . Parent=GSCOCT00033743001 | |
| 51497 chr10 manual_curation exon 26514353 26514421 . - . Parent=GSCOCT00033743001 | |
| 51498 chr10 manual_curation exon 26516086 26516505 . - . Parent=GSCOCT00033743001 | |
| 51499 chr10 manual_curation CDS 26508568 26508693 . - 0 Parent=GSCOCT00033743001 | |
| 51500 chr10 manual_curation CDS 26508780 26508950 . - 0 Parent=GSCOCT00033743001 | |
| 51501 chr10 manual_curation CDS 26509066 26509208 . - 1 Parent=GSCOCT00033743001 | |
| 51502 chr10 manual_curation CDS 26509879 26509984 . - 0 Parent=GSCOCT00033743001 | |
| 51503 chr10 manual_curation CDS 26511067 26511184 . - 2 Parent=GSCOCT00033743001 | |
| 51504 chr10 manual_curation CDS 26511268 26511383 . - 0 Parent=GSCOCT00033743001 | |
| 51505 chr10 manual_curation CDS 26511943 26512071 . - 0 Parent=GSCOCT00033743001 | |
| 51506 chr10 manual_curation CDS 26512211 26512318 . - 0 Parent=GSCOCT00033743001 | |
| 51507 chr10 manual_curation CDS 26512399 26512533 . - 0 Parent=GSCOCT00033743001 | |
| 51508 chr10 manual_curation CDS 26513918 26513995 . - 0 Parent=GSCOCT00033743001 | |
| 51509 chr10 manual_curation CDS 26514353 26514421 . - 0 Parent=GSCOCT00033743001 | |
| 51510 chr10 manual_curation CDS 26516086 26516157 . - 0 Parent=GSCOCT00033743001 | |
| 51511 chr10 manual_curation gene 26539087 26542260 . - . ID=GSCOCG00033745001;Name=Cc10_g15580 | |
| 51512 chr10 manual_curation mRNA 26539087 26542260 . - . ID=GSCOCT00033745001;Parent=GSCOCG00033745001;Name=Cc10_g15580 | |
| 51513 chr10 manual_curation polypeptide 26539427 26542032 . - . ID=GSCOCP00033745001;Derives_from=GSCOCT00033745001;Name=Cc10_g15580;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033745001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1396777..1397034%2C1396537..1396665%2C1396227..1396415%2C1394429..1394461));owner=coffea | |
| 51514 chr10 manual_curation exon 26539087 26539459 . - . Parent=GSCOCT00033745001 | |
| 51515 chr10 manual_curation exon 26541225 26541413 . - . Parent=GSCOCT00033745001 | |
| 51516 chr10 manual_curation exon 26541535 26541663 . - . Parent=GSCOCT00033745001 | |
| 51517 chr10 manual_curation exon 26541775 26542260 . - . Parent=GSCOCT00033745001 | |
| 51518 chr10 manual_curation CDS 26539427 26539459 . - 0 Parent=GSCOCT00033745001 | |
| 51519 chr10 manual_curation CDS 26541225 26541413 . - 0 Parent=GSCOCT00033745001 | |
| 51520 chr10 manual_curation CDS 26541535 26541663 . - 0 Parent=GSCOCT00033745001 | |
| 51521 chr10 manual_curation CDS 26541775 26542032 . - 0 Parent=GSCOCT00033745001 | |
| 51522 chr10 manual_curation gene 26556569 26558794 . - . ID=GSCOCG00033747001;Name=Cc10_g15590 | |
| 51523 chr10 manual_curation mRNA 26556569 26558794 . - . ID=GSCOCT00033747001;Parent=GSCOCG00033747001;Name=Cc10_g15590 | |
| 51524 chr10 manual_curation polypeptide 26557817 26558794 . - . ID=GSCOCP00033747001;Dbxref=SwissProt:Q9FGB0,SwissProt:Q9FMF4,SwissProt:Q9FY69,TAIR:AT5G09460.1,TAIR:AT5G50010.1,TAIR:AT5G64340.1,TrEMBL:A5C8Z8,TrEMBL:B9GV24,TrEMBL:F6H110;Derives_from=GSCOCT00033747001;Name=Cc10_g15590;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:BHLH143,CC_gene:BHLH145,CC_gene:SAC51;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033747001~ Putative uncharacterized protein~ BHLH143~ complete;original_location=complement(1412819..1413796);owner=coffea | |
| 51525 chr10 manual_curation exon 26556569 26558794 . - . Parent=GSCOCT00033747001 | |
| 51526 chr10 manual_curation CDS 26557817 26558794 . - 0 Parent=GSCOCT00033747001 | |
| 51527 chr10 manual_curation gene 26559904 26559981 . - . ID=GSCOCG00033749001;Name=Cc10_g15600 | |
| 51528 chr10 manual_curation mRNA 26559904 26559981 . - . ID=GSCOCT00033749001;Parent=GSCOCG00033749001;Name=Cc10_g15600 | |
| 51529 chr10 manual_curation polypeptide 26559904 26559981 . - . ID=GSCOCP00033749001;Derives_from=GSCOCT00033749001;Name=Cc10_g15600;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033749001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(1414906..1414983);owner=coffea | |
| 51530 chr10 manual_curation exon 26559904 26559981 . - . Parent=GSCOCT00033749001 | |
| 51531 chr10 manual_curation CDS 26559904 26559981 . - 0 Parent=GSCOCT00033749001 | |
| 51532 chr10 manual_curation gene 26560033 26561227 . - . ID=GSCOCG00033750001;Name=Cc10_g15610 | |
| 51533 chr10 manual_curation mRNA 26560033 26561227 . - . ID=GSCOCT00033750001;Parent=GSCOCG00033750001;Name=Cc10_g15610 | |
| 51534 chr10 manual_curation polypeptide 26560033 26561227 . - . ID=GSCOCP00033750001;Derives_from=GSCOCT00033750001;Name=Cc10_g15610;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033750001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1415690..1416229%2C1415035..1415043));owner=coffea | |
| 51535 chr10 manual_curation exon 26560033 26560041 . - . Parent=GSCOCT00033750001 | |
| 51536 chr10 manual_curation exon 26560688 26561227 . - . Parent=GSCOCT00033750001 | |
| 51537 chr10 manual_curation CDS 26560033 26560041 . - 0 Parent=GSCOCT00033750001 | |
| 51538 chr10 manual_curation CDS 26560688 26561227 . - 0 Parent=GSCOCT00033750001 | |
| 51539 chr10 manual_curation gene 26589823 26592065 . - . ID=GSCOCG00033751001;Name=Cc10_g15620 | |
| 51540 chr10 manual_curation mRNA 26589823 26592065 . - . ID=GSCOCT00033751001;Parent=GSCOCG00033751001;Name=Cc10_g15620 | |
| 51541 chr10 manual_curation polypeptide 26589823 26592065 . - . ID=GSCOCP00033751001;Dbxref=GENE3D:G3DSA:1.10.472.10,InterPro:IPR004367,InterPro:IPR006670,InterPro:IPR006671,InterPro:IPR011028,InterPro:IPR013763,InterPro:IPR015451,PANTHER:PTHR10177:SF12,PFAM:PF00134,PFAM:PF02984,PROSITE:PS00292,SMART:SM00385,SUPERFAMILY:SSF47954,SwissProt:Q6YXH8,SwissProt:Q8LGA1,SwissProt:Q8LHA8,TAIR:AT2G22490.2,TAIR:AT5G10440.1,TAIR:AT5G65420.3,TrEMBL:B9RJU5,TrEMBL:E0CRT2,TrEMBL:G9BZV0;Derives_from=GSCOCT00033751001;Name=Cc10_g15620;Ontology_term=CC_evidence_code:ISS,GO:0005634,CC_EC_number:missing_EC_number,PRODUCT:Cyclin-D4-1,CC_functional_completeness:modules,CC_gene:CYCD4-1,CC_gene:CYCD2-2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033751001~ Cyclin-D4-1~ CYCD4-1~ modules;original_location=complement(join(1446726..1447067%2C1445959..1446045%2C1445737..1445832%2C1445431..1445632%2C1445203..1445330%2C1444825..1445037));owner=coffea | |
| 51542 chr10 manual_curation exon 26589823 26590035 . - . Parent=GSCOCT00033751001 | |
| 51543 chr10 manual_curation exon 26590201 26590328 . - . Parent=GSCOCT00033751001 | |
| 51544 chr10 manual_curation exon 26590429 26590630 . - . Parent=GSCOCT00033751001 | |
| 51545 chr10 manual_curation exon 26590735 26590830 . - . Parent=GSCOCT00033751001 | |
| 51546 chr10 manual_curation exon 26590957 26591043 . - . Parent=GSCOCT00033751001 | |
| 51547 chr10 manual_curation exon 26591724 26592065 . - . Parent=GSCOCT00033751001 | |
| 51548 chr10 manual_curation CDS 26589823 26590035 . - 0 Parent=GSCOCT00033751001 | |
| 51549 chr10 manual_curation CDS 26590201 26590328 . - 1 Parent=GSCOCT00033751001 | |
| 51550 chr10 manual_curation CDS 26590429 26590630 . - 0 Parent=GSCOCT00033751001 | |
| 51551 chr10 manual_curation CDS 26590735 26590830 . - 0 Parent=GSCOCT00033751001 | |
| 51552 chr10 manual_curation CDS 26590957 26591043 . - 0 Parent=GSCOCT00033751001 | |
| 51553 chr10 manual_curation CDS 26591724 26592065 . - 0 Parent=GSCOCT00033751001 | |
| 51554 chr10 manual_curation gene 26602238 26605327 . + . ID=GSCOCG00033754001;Name=Cc10_g15630 | |
| 51555 chr10 manual_curation mRNA 26602238 26605327 . + . ID=GSCOCT00033754001;Parent=GSCOCG00033754001;Name=Cc10_g15630 | |
| 51556 chr10 manual_curation polypeptide 26602327 26604912 . + . ID=GSCOCP00033754001;Dbxref=GENE3D:G3DSA:3.30.70.830,InterPro:IPR004323,InterPro:IPR011322,PANTHER:PTHR23419,PFAM:PF03091,SUPERFAMILY:SSF54913,SwissProt:O60888,SwissProt:P93009,SwissProt:Q109R6,TAIR:AT2G33740.2,TrEMBL:B9GV26,TrEMBL:F6H112,TrEMBL:I1K9N5;Derives_from=GSCOCT00033754001;Name=Cc10_g15630;Ontology_term=CC_evidence_code:ISS,GO:0010038,CC_EC_number:missing_EC_number,PRODUCT:Protein CutA%2C chloroplastic,CC_functional_completeness:complete,CC_gene:CUTA,CC_gene:CUTA1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033754001~ Protein CutA%2C chloroplastic~ CUTA~ complete;original_location=join(1457329..1457498%2C1457605..1457714%2C1458424..1458486%2C1459299..1459330%2C1459471..1459565%2C1459833..1459914);owner=coffea | |
| 51557 chr10 manual_curation exon 26602238 26602496 . + . Parent=GSCOCT00033754001 | |
| 51558 chr10 manual_curation exon 26602603 26602712 . + . Parent=GSCOCT00033754001 | |
| 51559 chr10 manual_curation exon 26603422 26603484 . + . Parent=GSCOCT00033754001 | |
| 51560 chr10 manual_curation exon 26604297 26604328 . + . Parent=GSCOCT00033754001 | |
| 51561 chr10 manual_curation exon 26604469 26604563 . + . Parent=GSCOCT00033754001 | |
| 51562 chr10 manual_curation exon 26604831 26605327 . + . Parent=GSCOCT00033754001 | |
| 51563 chr10 manual_curation CDS 26602327 26602496 . + 0 Parent=GSCOCT00033754001 | |
| 51564 chr10 manual_curation CDS 26602603 26602712 . + 2 Parent=GSCOCT00033754001 | |
| 51565 chr10 manual_curation CDS 26603422 26603484 . + 1 Parent=GSCOCT00033754001 | |
| 51566 chr10 manual_curation CDS 26604297 26604328 . + 1 Parent=GSCOCT00033754001 | |
| 51567 chr10 manual_curation CDS 26604469 26604563 . + 0 Parent=GSCOCT00033754001 | |
| 51568 chr10 manual_curation CDS 26604831 26604912 . + 2 Parent=GSCOCT00033754001 | |
| 51569 chr10 manual_curation gene 26605527 26609219 . - . ID=GSCOCG00033755001;Name=Cc10_g15640 | |
| 51570 chr10 manual_curation mRNA 26605527 26609219 . - . ID=GSCOCT00033755001;Parent=GSCOCG00033755001;Name=Cc10_g15640 | |
| 51571 chr10 manual_curation polypeptide 26606162 26608725 . - . ID=GSCOCP00033755001;Dbxref=GENE3D:G3DSA:1.20.190.20,InterPro:IPR000308,PANTHER:PTHR18860,PFAM:PF00244,PRINTS:PR00305,PROSITE:PS00797,SMART:SM00101,SUPERFAMILY:SSF48445,SwissProt:O49996,SwissProt:P42645,SwissProt:P48349,SwissProt:P93206,SwissProt:Q2R2W2,TAIR:AT5G16050.1;Derives_from=GSCOCT00033755001;Name=Cc10_g15640;Ontology_term=CC_evidence_code:ISS,GO:0019904,CC_EC_number:missing_EC_number,PRODUCT:14-3-3-like protein D,CC_functional_completeness:fragment,CC_gene:TFT10,CC_gene:GF14B,CC_gene:GRF8,CC_gene:GRF6,CC_gene:TFT1,CC_gene:GF14D,CC_gene:GRF5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033755001~ 14-3-3-like protein D~ TFT10~ fragment;original_location=complement(join(1463629..1463727%2C1462166..1462288%2C1461300..1461416%2C1461164..1461184));owner=coffea | |
| 51572 chr10 manual_curation exon 26605527 26606182 . - . Parent=GSCOCT00033755001 | |
| 51573 chr10 manual_curation exon 26606298 26606414 . - . Parent=GSCOCT00033755001 | |
| 51574 chr10 manual_curation exon 26607164 26607286 . - . Parent=GSCOCT00033755001 | |
| 51575 chr10 manual_curation exon 26608627 26609219 . - . Parent=GSCOCT00033755001 | |
| 51576 chr10 manual_curation CDS 26606162 26606182 . - 0 Parent=GSCOCT00033755001 | |
| 51577 chr10 manual_curation CDS 26606298 26606414 . - 0 Parent=GSCOCT00033755001 | |
| 51578 chr10 manual_curation CDS 26607164 26607286 . - 0 Parent=GSCOCT00033755001 | |
| 51579 chr10 manual_curation CDS 26608627 26608725 . - 0 Parent=GSCOCT00033755001 | |
| 51580 chr10 manual_curation gene 26609976 26613230 . + . ID=GSCOCG00033756001;Name=Cc10_g15650 | |
| 51581 chr10 manual_curation mRNA 26609976 26613230 . + . ID=GSCOCT00033756001;Parent=GSCOCG00033756001;Name=Cc10_g15650 | |
| 51582 chr10 manual_curation polypeptide 26610810 26612351 . + . ID=GSCOCP00033756001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q3E9F0,SwissProt:Q9FNL2,SwissProt:Q9SS81,TAIR:AT3G09060.1,TAIR:AT5G18475.1,TAIR:AT5G46100.1,TIGRFAMs:TIGR00756,TrEMBL:A5AX74,TrEMBL:B9T1X9,TrEMBL:F6H114;Derives_from=GSCOCT00033756001;Name=Cc10_g15650;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At5g18475,CC_functional_completeness:complete,CC_gene:At5g18475,CC_gene:At5g46100,CC_gene:At3g09060;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033756001~ Pentatricopeptide repeat-containing protein At5g18475~ At5g18475~ complete;original_location=1465812..1467353;owner=coffea | |
| 51583 chr10 manual_curation exon 26609976 26610104 . + . Parent=GSCOCT00033756001 | |
| 51584 chr10 manual_curation exon 26610737 26613230 . + . Parent=GSCOCT00033756001 | |
| 51585 chr10 manual_curation CDS 26610810 26612351 . + 0 Parent=GSCOCT00033756001 | |
| 51586 chr10 manual_curation gene 26614205 26618739 . - . ID=GSCOCG00033757001;Name=Cc10_g15660 | |
| 51587 chr10 manual_curation mRNA 26614205 26618739 . - . ID=GSCOCT00033757001;Parent=GSCOCG00033757001;Name=Cc10_g15660 | |
| 51588 chr10 manual_curation polypeptide 26614566 26618534 . - . ID=GSCOCP00033757001;Dbxref=GENE3D:G3DSA:1.10.287.110,InterPro:IPR001623,InterPro:IPR003095,InterPro:IPR015609,InterPro:IPR018253,PANTHER:PTHR11821,PFAM:PF00226,PRINTS:PR00625,PROFILE:PS50076,PROSITE:PS00636,SMART:SM00271,SUPERFAMILY:SSF46565,SwissProt:P50027,SwissProt:Q3AF07,SwissProt:Q67S53,TAIR:AT2G33735.1,TAIR:AT3G47940.1,TAIR:AT5G16650.1,TrEMBL:B7FHF9,TrEMBL:G7KBI1,TrEMBL:I1JGY4;Derives_from=GSCOCT00033757001;Name=Cc10_g15660;Ontology_term=CC_evidence_code:ISS,GO:0006457,GO:0031072,GO:0051082,CC_EC_number:missing_EC_number,PRODUCT:Chaperone DnaJ-domain superfamily protein,CC_functional_completeness:modules,CC_gene:dnaJ,CC_gene:slr0093;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033757001~ Chaperone DnaJ-domain superfamily protein~ dnaJ~ modules;original_location=complement(join(1473348..1473536%2C1473186..1473263%2C1472905..1472980%2C1469732..1469805%2C1469568..1469639));owner=coffea | |
| 51589 chr10 manual_curation exon 26614205 26614637 . - . Parent=GSCOCT00033757001 | |
| 51590 chr10 manual_curation exon 26614730 26614803 . - . Parent=GSCOCT00033757001 | |
| 51591 chr10 manual_curation exon 26617903 26617978 . - . Parent=GSCOCT00033757001 | |
| 51592 chr10 manual_curation exon 26618184 26618261 . - . Parent=GSCOCT00033757001 | |
| 51593 chr10 manual_curation exon 26618346 26618739 . - . Parent=GSCOCT00033757001 | |
| 51594 chr10 manual_curation CDS 26614566 26614637 . - 0 Parent=GSCOCT00033757001 | |
| 51595 chr10 manual_curation CDS 26614730 26614803 . - 1 Parent=GSCOCT00033757001 | |
| 51596 chr10 manual_curation CDS 26617903 26617978 . - 0 Parent=GSCOCT00033757001 | |
| 51597 chr10 manual_curation CDS 26618184 26618261 . - 0 Parent=GSCOCT00033757001 | |
| 51598 chr10 manual_curation CDS 26618346 26618534 . - 0 Parent=GSCOCT00033757001 | |
| 51599 chr10 manual_curation gene 26621806 26628792 . + . ID=GSCOCG00033759001;Name=Cc10_g15670 | |
| 51600 chr10 manual_curation mRNA 26621806 26628792 . + . ID=GSCOCT00033759001;Parent=GSCOCG00033759001;Name=Cc10_g15670 | |
| 51601 chr10 manual_curation polypeptide 26622645 26628333 . + . ID=GSCOCP00033759001;Dbxref=HAMAP:MF_00473,InterPro:IPR001672,InterPro:IPR018189,PANTHER:PTHR11469,PFAM:PF00342,PRINTS:PR00662,PROSITE:PS00174,SwissProt:B2J5F1,SwissProt:Q3M6S3,SwissProt:Q8YY05,TAIR:AT4G24620.1,TAIR:AT5G42740.1,TrEMBL:I1JV38;Derives_from=GSCOCT00033759001;Name=Cc10_g15670;Ontology_term=CC_evidence_code:ISS,GO:0004347,GO:0006094,GO:0006096,CC_EC_number:5.3.1.9,PRODUCT:Glucose-6-phosphate isomerase,CC_functional_completeness:complete,CC_gene:pgi;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033759001~ Glucose-6-phosphate isomerase~ pgi~ complete;original_location=join(1477647..1477766%2C1478540..1478659%2C1479135..1479233%2C1479326..1479409%2C1479698..1479841%2C1479941..1480006%2C1480170..1480238%2C1480339..1480446%2C1481704..1481756%2C1481852..1481990%2C1482148..1482304%2C1482478..1482556%2C1483021..1483087%2C1483201..1483335);owner=coffea | |
| 51602 chr10 manual_curation exon 26621806 26622764 . + . Parent=GSCOCT00033759001 | |
| 51603 chr10 manual_curation exon 26623538 26623657 . + . Parent=GSCOCT00033759001 | |
| 51604 chr10 manual_curation exon 26624133 26624231 . + . Parent=GSCOCT00033759001 | |
| 51605 chr10 manual_curation exon 26624324 26624407 . + . Parent=GSCOCT00033759001 | |
| 51606 chr10 manual_curation exon 26624696 26624839 . + . Parent=GSCOCT00033759001 | |
| 51607 chr10 manual_curation exon 26624939 26625004 . + . Parent=GSCOCT00033759001 | |
| 51608 chr10 manual_curation exon 26625168 26625236 . + . Parent=GSCOCT00033759001 | |
| 51609 chr10 manual_curation exon 26625337 26625444 . + . Parent=GSCOCT00033759001 | |
| 51610 chr10 manual_curation exon 26626702 26626754 . + . Parent=GSCOCT00033759001 | |
| 51611 chr10 manual_curation exon 26626850 26626988 . + . Parent=GSCOCT00033759001 | |
| 51612 chr10 manual_curation exon 26627146 26627302 . + . Parent=GSCOCT00033759001 | |
| 51613 chr10 manual_curation exon 26627476 26627554 . + . Parent=GSCOCT00033759001 | |
| 51614 chr10 manual_curation exon 26628019 26628085 . + . Parent=GSCOCT00033759001 | |
| 51615 chr10 manual_curation exon 26628199 26628792 . + . Parent=GSCOCT00033759001 | |
| 51616 chr10 manual_curation CDS 26622645 26622764 . + 0 Parent=GSCOCT00033759001 | |
| 51617 chr10 manual_curation CDS 26623538 26623657 . + 0 Parent=GSCOCT00033759001 | |
| 51618 chr10 manual_curation CDS 26624133 26624231 . + 0 Parent=GSCOCT00033759001 | |
| 51619 chr10 manual_curation CDS 26624324 26624407 . + 0 Parent=GSCOCT00033759001 | |
| 51620 chr10 manual_curation CDS 26624696 26624839 . + 0 Parent=GSCOCT00033759001 | |
| 51621 chr10 manual_curation CDS 26624939 26625004 . + 0 Parent=GSCOCT00033759001 | |
| 51622 chr10 manual_curation CDS 26625168 26625236 . + 0 Parent=GSCOCT00033759001 | |
| 51623 chr10 manual_curation CDS 26625337 26625444 . + 0 Parent=GSCOCT00033759001 | |
| 51624 chr10 manual_curation CDS 26626702 26626754 . + 0 Parent=GSCOCT00033759001 | |
| 51625 chr10 manual_curation CDS 26626850 26626988 . + 2 Parent=GSCOCT00033759001 | |
| 51626 chr10 manual_curation CDS 26627146 26627302 . + 0 Parent=GSCOCT00033759001 | |
| 51627 chr10 manual_curation CDS 26627476 26627554 . + 1 Parent=GSCOCT00033759001 | |
| 51628 chr10 manual_curation CDS 26628019 26628085 . + 2 Parent=GSCOCT00033759001 | |
| 51629 chr10 manual_curation CDS 26628199 26628333 . + 0 Parent=GSCOCT00033759001 | |
| 51630 chr10 manual_curation gene 26636822 26648955 . + . ID=GSCOCG00033760001;Name=Cc10_g15680 | |
| 51631 chr10 manual_curation mRNA 26636822 26648955 . + . ID=GSCOCT00033760001;Parent=GSCOCG00033760001;Name=Cc10_g15680 | |
| 51632 chr10 manual_curation polypeptide 26637184 26648519 . + . ID=GSCOCP00033760001;Dbxref=TAIR:AT4G24610.2,TAIR:AT5G48310.1,TAIR:AT5G65440.3,TrEMBL:E0CRT9,TrEMBL:I1JGY6,TrEMBL:I1JGY8;Derives_from=GSCOCT00033760001;Name=Cc10_g15680;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033760001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B EXPRESSED IN: 20 plant structures%3B EXPRESSED DURING: 12 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65440.1).~ unknown_gene~ complete;original_location=join(1492186..1492233%2C1493086..1493712%2C1495033..1495262%2C1495400..1495471%2C1495557..1495691%2C1496422..1496540%2C1496619..1496918%2C1497414..1497504%2C1497573..1497678%2C1497777..1497890%2C1498230..1498393%2C1498563..1498683%2C1498832..1499056%2C1499143..1499333%2C1500056..1500223%2C1500308..1500413%2C1500851..1500988%2C1501922..1502083%2C1502164..1502364%2C1502752..1502946%2C1503077..1503148%2C1503366..1503521);owner=coffea | |
| 51633 chr10 manual_curation exon 26636822 26637046 . + . Parent=GSCOCT00033760001 | |
| 51634 chr10 manual_curation exon 26637159 26637231 . + . Parent=GSCOCT00033760001 | |
| 51635 chr10 manual_curation exon 26638084 26638710 . + . Parent=GSCOCT00033760001 | |
| 51636 chr10 manual_curation exon 26640031 26640260 . + . Parent=GSCOCT00033760001 | |
| 51637 chr10 manual_curation exon 26640398 26640469 . + . Parent=GSCOCT00033760001 | |
| 51638 chr10 manual_curation exon 26640555 26640689 . + . Parent=GSCOCT00033760001 | |
| 51639 chr10 manual_curation exon 26641420 26641538 . + . Parent=GSCOCT00033760001 | |
| 51640 chr10 manual_curation exon 26641617 26641916 . + . Parent=GSCOCT00033760001 | |
| 51641 chr10 manual_curation exon 26642412 26642502 . + . Parent=GSCOCT00033760001 | |
| 51642 chr10 manual_curation exon 26642571 26642676 . + . Parent=GSCOCT00033760001 | |
| 51643 chr10 manual_curation exon 26642775 26642888 . + . Parent=GSCOCT00033760001 | |
| 51644 chr10 manual_curation exon 26643228 26643391 . + . Parent=GSCOCT00033760001 | |
| 51645 chr10 manual_curation exon 26643561 26643681 . + . Parent=GSCOCT00033760001 | |
| 51646 chr10 manual_curation exon 26643830 26644054 . + . Parent=GSCOCT00033760001 | |
| 51647 chr10 manual_curation exon 26644141 26644331 . + . Parent=GSCOCT00033760001 | |
| 51648 chr10 manual_curation exon 26645054 26645221 . + . Parent=GSCOCT00033760001 | |
| 51649 chr10 manual_curation exon 26645306 26645411 . + . Parent=GSCOCT00033760001 | |
| 51650 chr10 manual_curation exon 26645849 26645986 . + . Parent=GSCOCT00033760001 | |
| 51651 chr10 manual_curation exon 26646920 26647081 . + . Parent=GSCOCT00033760001 | |
| 51652 chr10 manual_curation exon 26647162 26647362 . + . Parent=GSCOCT00033760001 | |
| 51653 chr10 manual_curation exon 26647750 26647944 . + . Parent=GSCOCT00033760001 | |
| 51654 chr10 manual_curation exon 26648075 26648146 . + . Parent=GSCOCT00033760001 | |
| 51655 chr10 manual_curation exon 26648364 26648955 . + . Parent=GSCOCT00033760001 | |
| 51656 chr10 manual_curation CDS 26637184 26637231 . + 0 Parent=GSCOCT00033760001 | |
| 51657 chr10 manual_curation CDS 26638084 26638710 . + 0 Parent=GSCOCT00033760001 | |
| 51658 chr10 manual_curation CDS 26640031 26640260 . + 0 Parent=GSCOCT00033760001 | |
| 51659 chr10 manual_curation CDS 26640398 26640469 . + 2 Parent=GSCOCT00033760001 | |
| 51660 chr10 manual_curation CDS 26640555 26640689 . + 2 Parent=GSCOCT00033760001 | |
| 51661 chr10 manual_curation CDS 26641420 26641538 . + 2 Parent=GSCOCT00033760001 | |
| 51662 chr10 manual_curation CDS 26641617 26641916 . + 1 Parent=GSCOCT00033760001 | |
| 51663 chr10 manual_curation CDS 26642412 26642502 . + 1 Parent=GSCOCT00033760001 | |
| 51664 chr10 manual_curation CDS 26642571 26642676 . + 2 Parent=GSCOCT00033760001 | |
| 51665 chr10 manual_curation CDS 26642775 26642888 . + 0 Parent=GSCOCT00033760001 | |
| 51666 chr10 manual_curation CDS 26643228 26643391 . + 0 Parent=GSCOCT00033760001 | |
| 51667 chr10 manual_curation CDS 26643561 26643681 . + 2 Parent=GSCOCT00033760001 | |
| 51668 chr10 manual_curation CDS 26643830 26644054 . + 0 Parent=GSCOCT00033760001 | |
| 51669 chr10 manual_curation CDS 26644141 26644331 . + 0 Parent=GSCOCT00033760001 | |
| 51670 chr10 manual_curation CDS 26645054 26645221 . + 2 Parent=GSCOCT00033760001 | |
| 51671 chr10 manual_curation CDS 26645306 26645411 . + 2 Parent=GSCOCT00033760001 | |
| 51672 chr10 manual_curation CDS 26645849 26645986 . + 0 Parent=GSCOCT00033760001 | |
| 51673 chr10 manual_curation CDS 26646920 26647081 . + 0 Parent=GSCOCT00033760001 | |
| 51674 chr10 manual_curation CDS 26647162 26647362 . + 0 Parent=GSCOCT00033760001 | |
| 51675 chr10 manual_curation CDS 26647750 26647944 . + 0 Parent=GSCOCT00033760001 | |
| 51676 chr10 manual_curation CDS 26648075 26648146 . + 0 Parent=GSCOCT00033760001 | |
| 51677 chr10 manual_curation CDS 26648364 26648519 . + 0 Parent=GSCOCT00033760001 | |
| 51678 chr10 manual_curation gene 26649644 26653256 . - . ID=GSCOCG00033761001;Name=Cc10_g15690 | |
| 51679 chr10 manual_curation mRNA 26649644 26653256 . - . ID=GSCOCT00033761001;Parent=GSCOCG00033761001;Name=Cc10_g15690 | |
| 51680 chr10 manual_curation polypeptide 26649936 26652941 . - . ID=GSCOCP00033761001;Dbxref=TAIR:AT1G44770.1,TAIR:AT4G24590.1,TAIR:AT5G49710.3,TrEMBL:B9GN24,TrEMBL:B9RJV1,TrEMBL:E0CRU0;Derives_from=GSCOCT00033761001;Name=Cc10_g15690;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033761001~ unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24590.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(1507653..1507943%2C1506705..1506795%2C1506118..1506278%2C1505400..1505427%2C1505116..1505224%2C1504938..1505019));owner=coffea | |
| 51681 chr10 manual_curation exon 26653086 26653256 . - . Parent=GSCOCT00033761001 | |
| 51682 chr10 manual_curation exon 26649644 26650017 . - . Parent=GSCOCT00033761001 | |
| 51683 chr10 manual_curation exon 26650114 26650222 . - . Parent=GSCOCT00033761001 | |
| 51684 chr10 manual_curation exon 26650398 26650425 . - . Parent=GSCOCT00033761001 | |
| 51685 chr10 manual_curation exon 26651116 26651276 . - . Parent=GSCOCT00033761001 | |
| 51686 chr10 manual_curation exon 26651703 26651793 . - . Parent=GSCOCT00033761001 | |
| 51687 chr10 manual_curation exon 26652651 26652946 . - . Parent=GSCOCT00033761001 | |
| 51688 chr10 manual_curation CDS 26649936 26650017 . - 2 Parent=GSCOCT00033761001 | |
| 51689 chr10 manual_curation CDS 26650114 26650222 . - 1 Parent=GSCOCT00033761001 | |
| 51690 chr10 manual_curation CDS 26650398 26650425 . - 0 Parent=GSCOCT00033761001 | |
| 51691 chr10 manual_curation CDS 26651116 26651276 . - 1 Parent=GSCOCT00033761001 | |
| 51692 chr10 manual_curation CDS 26651703 26651793 . - 0 Parent=GSCOCT00033761001 | |
| 51693 chr10 manual_curation CDS 26652651 26652941 . - 0 Parent=GSCOCT00033761001 | |
| 51694 chr10 manual_curation gene 26654321 26656450 . + . ID=GSCOCG00033762001;Name=Cc10_g15700 | |
| 51695 chr10 manual_curation mRNA 26654321 26656450 . + . ID=GSCOCT00033762001;Parent=GSCOCG00033762001;Name=Cc10_g15700 | |
| 51696 chr10 manual_curation polypeptide 26654720 26656450 . + . ID=GSCOCP00033762001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q9LUC2,SwissProt:Q9LW63,SwissProt:Q9SIT7,TAIR:AT2G13600.1,TAIR:AT3G14730.1,TAIR:AT3G23330.1,TIGRFAMs:TIGR00756,TrEMBL:A5AL91,TrEMBL:A5ASX4,TrEMBL:I1LZE8;Derives_from=GSCOCT00033762001;Name=Cc10_g15700;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At3g14730,CC_functional_completeness:complete,CC_gene:PCMP-E31,CC_gene:PCMP-H32,CC_gene:PCMP-E76;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033762001~ Pentatricopeptide repeat-containing protein At3g14730~ PCMP-E31~ complete;original_location=1509722..1511452;owner=coffea | |
| 51697 chr10 manual_curation exon 26654321 26656450 . + . Parent=GSCOCT00033762001 | |
| 51698 chr10 manual_curation CDS 26654720 26656450 . + 0 Parent=GSCOCT00033762001 | |
| 51699 chr10 manual_curation gene 26656566 26657269 . + . ID=GSCOCG00033763001;Name=Cc10_g15710 | |
| 51700 chr10 manual_curation mRNA 26656566 26657269 . + . ID=GSCOCT00033763001;Parent=GSCOCG00033763001;Name=Cc10_g15710 | |
| 51701 chr10 manual_curation polypeptide 26656566 26657269 . + . ID=GSCOCP00033763001;Derives_from=GSCOCT00033763001;Name=Cc10_g15710;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033763001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(1511568..1511717%2C1512236..1512271);owner=coffea | |
| 51702 chr10 manual_curation exon 26656566 26656715 . + . Parent=GSCOCT00033763001 | |
| 51703 chr10 manual_curation exon 26657234 26657269 . + . Parent=GSCOCT00033763001 | |
| 51704 chr10 manual_curation CDS 26656566 26656715 . + 0 Parent=GSCOCT00033763001 | |
| 51705 chr10 manual_curation CDS 26657234 26657269 . + 0 Parent=GSCOCT00033763001 | |
| 51706 chr10 manual_curation gene 26662575 26678804 . + . ID=GSCOCG00033765001;Name=Cc10_g15720 | |
| 51707 chr10 manual_curation mRNA 26662575 26678804 . + . ID=GSCOCT00033765001;Parent=GSCOCG00033765001;Name=Cc10_g15720 | |
| 51708 chr10 manual_curation polypeptide 26663105 26678358 . + . ID=GSCOCP00033765001;Dbxref=GENE3D:G3DSA:1.10.555.10,GENE3D:G3DSA:2.30.29.30,InterPro:IPR000198,InterPro:IPR001849,InterPro:IPR008936,InterPro:IPR011993,PFAM:PF00169,PFAM:PF00620,PROFILE:PS50003,PROFILE:PS50238,SMART:SM00233,SMART:SM00324,SUPERFAMILY:SSF48350,SwissProt:Q5ZMM3,SwissProt:Q8C0D4,SwissProt:Q8IWW6,TAIR:AT4G24580.1,TAIR:AT5G12150.1,TAIR:AT5G19390.1,TrEMBL:B9GN25,TrEMBL:B9H6W6,TrEMBL:F6H117;Derives_from=GSCOCT00033765001;Name=Cc10_g15720;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0007165,CC_EC_number:missing_EC_number,PRODUCT:Rho GTPase activation protein (RhoGAP) with PH domain,CC_functional_completeness:complete,CC_gene:Arhgap12,CC_gene:ARHGAP12,CC_gene:ARHGAP15;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033765001~ Rho GTPase activation protein (RhoGAP) with PH domain~ Arhgap12~ complete;original_location=join(1518107..1518136%2C1518281..1518379%2C1519143..1519179%2C1520437..1520513%2C1521402..1521472%2C1521593..1521680%2C1523087..1523231%2C1524028..1524147%2C1524325..1524402%2C1524958..1525013%2C1525115..1525184%2C1525750..1525834%2C1527402..1527645%2C1529181..1529381%2C1529837..1530133%2C1530354..1530403%2C1530723..1530783%2C1530876..1530959%2C1531079..1531192%2C1531267..1531433%2C1531931..1532000%2C1532659..1532868%2C1532971..1533360);owner=coffea | |
| 51709 chr10 manual_curation exon 26662575 26662933 . + . Parent=GSCOCT00033765001 | |
| 51710 chr10 manual_curation exon 26663051 26663134 . + . Parent=GSCOCT00033765001 | |
| 51711 chr10 manual_curation exon 26663279 26663377 . + . Parent=GSCOCT00033765001 | |
| 51712 chr10 manual_curation exon 26664141 26664177 . + . Parent=GSCOCT00033765001 | |
| 51713 chr10 manual_curation exon 26665435 26665511 . + . Parent=GSCOCT00033765001 | |
| 51714 chr10 manual_curation exon 26666400 26666470 . + . Parent=GSCOCT00033765001 | |
| 51715 chr10 manual_curation exon 26666591 26666678 . + . Parent=GSCOCT00033765001 | |
| 51716 chr10 manual_curation exon 26668085 26668229 . + . Parent=GSCOCT00033765001 | |
| 51717 chr10 manual_curation exon 26669026 26669145 . + . Parent=GSCOCT00033765001 | |
| 51718 chr10 manual_curation exon 26669323 26669400 . + . Parent=GSCOCT00033765001 | |
| 51719 chr10 manual_curation exon 26669956 26670011 . + . Parent=GSCOCT00033765001 | |
| 51720 chr10 manual_curation exon 26670113 26670182 . + . Parent=GSCOCT00033765001 | |
| 51721 chr10 manual_curation exon 26670748 26670832 . + . Parent=GSCOCT00033765001 | |
| 51722 chr10 manual_curation exon 26672400 26672643 . + . Parent=GSCOCT00033765001 | |
| 51723 chr10 manual_curation exon 26674179 26674379 . + . Parent=GSCOCT00033765001 | |
| 51724 chr10 manual_curation exon 26674835 26675131 . + . Parent=GSCOCT00033765001 | |
| 51725 chr10 manual_curation exon 26675352 26675401 . + . Parent=GSCOCT00033765001 | |
| 51726 chr10 manual_curation exon 26675721 26675781 . + . Parent=GSCOCT00033765001 | |
| 51727 chr10 manual_curation exon 26675874 26675957 . + . Parent=GSCOCT00033765001 | |
| 51728 chr10 manual_curation exon 26676077 26676190 . + . Parent=GSCOCT00033765001 | |
| 51729 chr10 manual_curation exon 26676265 26676431 . + . Parent=GSCOCT00033765001 | |
| 51730 chr10 manual_curation exon 26676929 26676998 . + . Parent=GSCOCT00033765001 | |
| 51731 chr10 manual_curation exon 26677657 26677866 . + . Parent=GSCOCT00033765001 | |
| 51732 chr10 manual_curation exon 26677969 26678804 . + . Parent=GSCOCT00033765001 | |
| 51733 chr10 manual_curation CDS 26663105 26663134 . + 0 Parent=GSCOCT00033765001 | |
| 51734 chr10 manual_curation CDS 26663279 26663377 . + 0 Parent=GSCOCT00033765001 | |
| 51735 chr10 manual_curation CDS 26664141 26664177 . + 0 Parent=GSCOCT00033765001 | |
| 51736 chr10 manual_curation CDS 26665435 26665511 . + 1 Parent=GSCOCT00033765001 | |
| 51737 chr10 manual_curation CDS 26666400 26666470 . + 0 Parent=GSCOCT00033765001 | |
| 51738 chr10 manual_curation CDS 26666591 26666678 . + 2 Parent=GSCOCT00033765001 | |
| 51739 chr10 manual_curation CDS 26668085 26668229 . + 0 Parent=GSCOCT00033765001 | |
| 51740 chr10 manual_curation CDS 26669026 26669145 . + 1 Parent=GSCOCT00033765001 | |
| 51741 chr10 manual_curation CDS 26669323 26669400 . + 1 Parent=GSCOCT00033765001 | |
| 51742 chr10 manual_curation CDS 26669956 26670011 . + 1 Parent=GSCOCT00033765001 | |
| 51743 chr10 manual_curation CDS 26670113 26670182 . + 0 Parent=GSCOCT00033765001 | |
| 51744 chr10 manual_curation CDS 26670748 26670832 . + 1 Parent=GSCOCT00033765001 | |
| 51745 chr10 manual_curation CDS 26672400 26672643 . + 2 Parent=GSCOCT00033765001 | |
| 51746 chr10 manual_curation CDS 26674179 26674379 . + 0 Parent=GSCOCT00033765001 | |
| 51747 chr10 manual_curation CDS 26674835 26675131 . + 0 Parent=GSCOCT00033765001 | |
| 51748 chr10 manual_curation CDS 26675352 26675401 . + 0 Parent=GSCOCT00033765001 | |
| 51749 chr10 manual_curation CDS 26675721 26675781 . + 2 Parent=GSCOCT00033765001 | |
| 51750 chr10 manual_curation CDS 26675874 26675957 . + 0 Parent=GSCOCT00033765001 | |
| 51751 chr10 manual_curation CDS 26676077 26676190 . + 0 Parent=GSCOCT00033765001 | |
| 51752 chr10 manual_curation CDS 26676265 26676431 . + 0 Parent=GSCOCT00033765001 | |
| 51753 chr10 manual_curation CDS 26676929 26676998 . + 2 Parent=GSCOCT00033765001 | |
| 51754 chr10 manual_curation CDS 26677657 26677866 . + 0 Parent=GSCOCT00033765001 | |
| 51755 chr10 manual_curation CDS 26677969 26678358 . + 0 Parent=GSCOCT00033765001 | |
| 51756 chr10 manual_curation gene 26679158 26680132 . - . ID=GSCOCG00033766001;Name=Cc10_g15730 | |
| 51757 chr10 manual_curation mRNA 26679158 26680132 . - . ID=GSCOCT00033766001;Parent=GSCOCG00033766001;Name=Cc10_g15730 | |
| 51758 chr10 manual_curation polypeptide 26679158 26680132 . - . ID=GSCOCP00033766001;Dbxref=InterPro:IPR001993,InterPro:IPR018108,PANTHER:PTHR11896,PFAM:PF00153,PROFILE:PS50920,SUPERFAMILY:SSF103506,SwissProt:Q02978,SwissProt:Q54PY7,SwissProt:Q9CR62,TAIR:AT2G22500.1,TAIR:AT4G24570.1,TAIR:AT5G09470.1,TrEMBL:B9SXH6,TrEMBL:F6H118,TrEMBL:I1KX90;Derives_from=GSCOCT00033766001;Name=Cc10_g15730;Ontology_term=CC_evidence_code:ISS,GO:0005488,GO:0006810,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable mitochondrial 2-oxoglutarate/malate carrier protein,CC_functional_completeness:complete,CC_gene:ucpC,CC_gene:Slc25a11,CC_gene:SLC25A11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033766001~ Putative Probable mitochondrial 2-oxoglutarate/malate carrier protein~ ucpC~ complete;original_location=complement(1534160..1535134);owner=coffea | |
| 51759 chr10 manual_curation exon 26679158 26680132 . - . Parent=GSCOCT00033766001 | |
| 51760 chr10 manual_curation CDS 26679158 26680132 . - 0 Parent=GSCOCT00033766001 | |
| 51761 chr10 manual_curation gene 26684157 26684267 . + . ID=GSCOCG00033768001;Name=Cc10_g15740 | |
| 51762 chr10 manual_curation mRNA 26684157 26684267 . + . ID=GSCOCT00033768001;Parent=GSCOCG00033768001;Name=Cc10_g15740 | |
| 51763 chr10 manual_curation polypeptide 26684157 26684267 . + . ID=GSCOCP00033768001;Derives_from=GSCOCT00033768001;Name=Cc10_g15740;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033768001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1539159..1539269;owner=coffea | |
| 51764 chr10 manual_curation exon 26684157 26684267 . + . Parent=GSCOCT00033768001 | |
| 51765 chr10 manual_curation CDS 26684157 26684267 . + 0 Parent=GSCOCT00033768001 | |
| 51766 chr10 manual_curation gene 26684493 26685797 . + . ID=GSCOCG00033769001;Name=Cc10_g15750 | |
| 51767 chr10 manual_curation mRNA 26684493 26685797 . + . ID=GSCOCT00033769001;Parent=GSCOCG00033769001;Name=Cc10_g15750 | |
| 51768 chr10 manual_curation polypeptide 26684493 26685797 . + . ID=GSCOCP00033769001;Dbxref=TAIR:AT1G58120.1,TAIR:AT5G01710.1,TrEMBL:A5B0M5,TrEMBL:B9RJV6,TrEMBL:G7KBJ2;Derives_from=GSCOCT00033769001;Name=Cc10_g15750;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033769001~ Putative BEST Arabidopsis thaliana protein match is: methyltransferases (TAIR:AT5G01710.1)%3B Has 93 Blast hits to 93 proteins in 15 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 1%3B Fungi - 0%3B Plants - 92%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=1539495..1540799;owner=coffea | |
| 51769 chr10 manual_curation exon 26684493 26685797 . + . Parent=GSCOCT00033769001 | |
| 51770 chr10 manual_curation CDS 26684493 26685797 . + 0 Parent=GSCOCT00033769001 | |
| 51771 chr10 manual_curation gene 26688693 26700377 . + . ID=GSCOCG00033770001;Name=Cc10_g15760 | |
| 51772 chr10 manual_curation mRNA 26688693 26700377 . + . ID=GSCOCT00033770001;Parent=GSCOCG00033770001;Name=Cc10_g15760 | |
| 51773 chr10 manual_curation polypeptide 26691030 26699947 . + . ID=GSCOCP00033770001;Dbxref=GENE3D:G3DSA:1.20.920.10,InterPro:IPR001487,InterPro:IPR003593,InterPro:IPR003959,InterPro:IPR003960,PFAM:PF00004,PFAM:PF00439,PRINTS:PR00503,PROFILE:PS50014,PROSITE:PS00674,SMART:SM00297,SMART:SM00382,SUPERFAMILY:SSF47370,SwissProt:F4IAE9,SwissProt:Q6PL18,SwissProt:Q9ULI0,TAIR:AT1G05910.1,TAIR:AT3G15120.1,TAIR:AT5G03340.1,TrEMBL:F6HYR3,TrEMBL:I1LQE7,TrEMBL:I1LQE8;Derives_from=GSCOCT00033770001;Name=Cc10_g15760;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0017111,CC_EC_number:3.6.4.3,PRODUCT:ATPase family AAA domain-containing protein At1g05910,CC_functional_completeness:complete,CC_gene:At1g05910,CC_gene:ATAD2B,CC_gene:ATAD2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033770001~ ATPase family AAA domain-containing protein At1g05910~ At1g05910~ complete;original_location=join(1546032..1546253%2C1547767..1547868%2C1548208..1550034%2C1550120..1550308%2C1550409..1550551%2C1551021..1551266%2C1551466..1551652%2C1552793..1552858%2C1552944..1553193%2C1554582..1554949);owner=coffea | |
| 51774 chr10 manual_curation exon 26688693 26688914 . + . Parent=GSCOCT00033770001 | |
| 51775 chr10 manual_curation exon 26690989 26691251 . + . Parent=GSCOCT00033770001 | |
| 51776 chr10 manual_curation exon 26692765 26692866 . + . Parent=GSCOCT00033770001 | |
| 51777 chr10 manual_curation exon 26693206 26695032 . + . Parent=GSCOCT00033770001 | |
| 51778 chr10 manual_curation exon 26695118 26695306 . + . Parent=GSCOCT00033770001 | |
| 51779 chr10 manual_curation exon 26695407 26695549 . + . Parent=GSCOCT00033770001 | |
| 51780 chr10 manual_curation exon 26696019 26696264 . + . Parent=GSCOCT00033770001 | |
| 51781 chr10 manual_curation exon 26696464 26696650 . + . Parent=GSCOCT00033770001 | |
| 51782 chr10 manual_curation exon 26697791 26697856 . + . Parent=GSCOCT00033770001 | |
| 51783 chr10 manual_curation exon 26697942 26698191 . + . Parent=GSCOCT00033770001 | |
| 51784 chr10 manual_curation exon 26699580 26700377 . + . Parent=GSCOCT00033770001 | |
| 51785 chr10 manual_curation CDS 26691030 26691251 . + 0 Parent=GSCOCT00033770001 | |
| 51786 chr10 manual_curation CDS 26692765 26692866 . + 0 Parent=GSCOCT00033770001 | |
| 51787 chr10 manual_curation CDS 26693206 26695032 . + 0 Parent=GSCOCT00033770001 | |
| 51788 chr10 manual_curation CDS 26695118 26695306 . + 0 Parent=GSCOCT00033770001 | |
| 51789 chr10 manual_curation CDS 26695407 26695549 . + 0 Parent=GSCOCT00033770001 | |
| 51790 chr10 manual_curation CDS 26696019 26696264 . + 2 Parent=GSCOCT00033770001 | |
| 51791 chr10 manual_curation CDS 26696464 26696650 . + 2 Parent=GSCOCT00033770001 | |
| 51792 chr10 manual_curation CDS 26697791 26697856 . + 0 Parent=GSCOCT00033770001 | |
| 51793 chr10 manual_curation CDS 26697942 26698191 . + 0 Parent=GSCOCT00033770001 | |
| 51794 chr10 manual_curation CDS 26699580 26699947 . + 1 Parent=GSCOCT00033770001 | |
| 51795 chr10 manual_curation gene 26700653 26702002 . - . ID=GSCOCG00033771001;Name=Cc10_g15770 | |
| 51796 chr10 manual_curation mRNA 26700653 26702002 . - . ID=GSCOCT00033771001;Parent=GSCOCG00033771001;Name=Cc10_g15770 | |
| 51797 chr10 manual_curation polypeptide 26700653 26702002 . - . ID=GSCOCP00033771001;Dbxref=GENE3D:G3DSA:2.40.70.10,InterPro:IPR001461,InterPro:IPR009007,InterPro:IPR021109,PANTHER:PTHR13683,PFAM:PF00026,SUPERFAMILY:SSF50630,SwissProt:Q766C3,SwissProt:Q9LHE3,SwissProt:Q9LS40,TAIR:AT1G09750.1,TAIR:AT3G54400.1,TAIR:AT5G07030.1,TrEMBL:A9PFY7,TrEMBL:B9GN29,TrEMBL:F6H120;Derives_from=GSCOCT00033771001;Name=Cc10_g15770;Ontology_term=CC_evidence_code:ISS,GO:0004190,GO:0006508,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein ASPARTIC PROTEASE IN GUARD CELL 1,CC_functional_completeness:fragment,CC_gene:nep1,CC_gene:ASPG1,CC_gene:ASPG2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033771001~ Putative Protein ASPARTIC PROTEASE IN GUARD CELL 1~ nep1~ fragment;original_location=complement(1555655..1557004);owner=coffea | |
| 51798 chr10 manual_curation exon 26700653 26702002 . - . Parent=GSCOCT00033771001 | |
| 51799 chr10 manual_curation CDS 26700653 26702002 . - 0 Parent=GSCOCT00033771001 | |
| 51800 chr10 manual_curation gene 26711255 26714763 . - . ID=GSCOCG00033772001;Name=Cc10_g15780 | |
| 51801 chr10 manual_curation mRNA 26711255 26714763 . - . ID=GSCOCT00033772001;Parent=GSCOCG00033772001;Name=Cc10_g15780 | |
| 51802 chr10 manual_curation polypeptide 26711736 26714600 . - . ID=GSCOCP00033772001;Dbxref=GENE3D:G3DSA:3.40.50.620,InterPro:IPR006015,InterPro:IPR006016,InterPro:IPR014729,PFAM:PF00582,PRINTS:PR01438,SwissProt:Q8LGG8,TAIR:AT1G09740.1,TAIR:AT3G11930.3,TAIR:AT3G58450.1,TrEMBL:B9GN30,TrEMBL:E0CRU7,TrEMBL:G7KBJ3;Derives_from=GSCOCT00033772001;Name=Cc10_g15780;Ontology_term=CC_evidence_code:ISS,GO:0006950,CC_EC_number:missing_EC_number,PRODUCT:Putative Universal stress protein A-like protein,CC_functional_completeness:fragment,CC_gene:At3g01520;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033772001~ Putative Universal stress protein A-like protein~ At3g01520~ fragment;original_location=complement(join(1569413..1569602%2C1569206..1569309%2C1568756..1568874%2C1566738..1566816));owner=coffea | |
| 51803 chr10 manual_curation exon 26711255 26711814 . - . Parent=GSCOCT00033772001 | |
| 51804 chr10 manual_curation exon 26713754 26713872 . - . Parent=GSCOCT00033772001 | |
| 51805 chr10 manual_curation exon 26714204 26714307 . - . Parent=GSCOCT00033772001 | |
| 51806 chr10 manual_curation exon 26714411 26714763 . - . Parent=GSCOCT00033772001 | |
| 51807 chr10 manual_curation CDS 26711736 26711814 . - 2 Parent=GSCOCT00033772001 | |
| 51808 chr10 manual_curation CDS 26713754 26713872 . - 0 Parent=GSCOCT00033772001 | |
| 51809 chr10 manual_curation CDS 26714204 26714307 . - 1 Parent=GSCOCT00033772001 | |
| 51810 chr10 manual_curation CDS 26714411 26714600 . - 0 Parent=GSCOCT00033772001 | |
| 51811 chr10 manual_curation gene 26719963 26728411 . + . ID=GSCOCG00033773001;Name=Cc10_g15790 | |
| 51812 chr10 manual_curation mRNA 26719963 26728411 . + . ID=GSCOCT00033773001;Parent=GSCOCG00033773001;Name=Cc10_g15790 | |
| 51813 chr10 manual_curation polypeptide 26720534 26728013 . + . ID=GSCOCP00033773001;Dbxref=InterPro:IPR001394,InterPro:IPR002893,InterPro:IPR018200,PFAM:PF00443,PFAM:PF01753,PROFILE:PS50235,PROFILE:PS50865,PROSITE:PS00972,PROSITE:PS01360,SwissProt:Q9FKP5,SwissProt:Q9SB51,SwissProt:Q9SJA1,TAIR:AT2G24640.1,TAIR:AT4G24560.1,TAIR:AT5G65450.1,TrEMBL:A5B0M8,TrEMBL:B9GN31,TrEMBL:B9RJV9;Derives_from=GSCOCT00033773001;Name=Cc10_g15790;Ontology_term=CC_evidence_code:ISS,GO:0004221,GO:0006511,GO:0008270,CC_EC_number:3.1.2.15,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:UBP16,CC_gene:UBP17,CC_gene:UBP19;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033773001~ Putative uncharacterized protein~ UBP16~ complete;original_location=join(1575536..1575972%2C1577659..1579024%2C1579112..1579200%2C1579403..1579488%2C1579610..1579772%2C1579876..1579993%2C1580094..1580251%2C1581012..1581096%2C1581206..1581418%2C1582115..1582176%2C1582259..1583015);owner=coffea | |
| 51814 chr10 manual_curation exon 26719963 26720970 . + . Parent=GSCOCT00033773001 | |
| 51815 chr10 manual_curation exon 26722657 26724022 . + . Parent=GSCOCT00033773001 | |
| 51816 chr10 manual_curation exon 26724110 26724198 . + . Parent=GSCOCT00033773001 | |
| 51817 chr10 manual_curation exon 26724401 26724486 . + . Parent=GSCOCT00033773001 | |
| 51818 chr10 manual_curation exon 26724608 26724770 . + . Parent=GSCOCT00033773001 | |
| 51819 chr10 manual_curation exon 26724874 26724991 . + . Parent=GSCOCT00033773001 | |
| 51820 chr10 manual_curation exon 26725092 26725249 . + . Parent=GSCOCT00033773001 | |
| 51821 chr10 manual_curation exon 26726010 26726094 . + . Parent=GSCOCT00033773001 | |
| 51822 chr10 manual_curation exon 26726204 26726416 . + . Parent=GSCOCT00033773001 | |
| 51823 chr10 manual_curation exon 26727113 26727174 . + . Parent=GSCOCT00033773001 | |
| 51824 chr10 manual_curation exon 26727257 26728411 . + . Parent=GSCOCT00033773001 | |
| 51825 chr10 manual_curation CDS 26720534 26720970 . + 0 Parent=GSCOCT00033773001 | |
| 51826 chr10 manual_curation CDS 26722657 26724022 . + 2 Parent=GSCOCT00033773001 | |
| 51827 chr10 manual_curation CDS 26724110 26724198 . + 0 Parent=GSCOCT00033773001 | |
| 51828 chr10 manual_curation CDS 26724401 26724486 . + 2 Parent=GSCOCT00033773001 | |
| 51829 chr10 manual_curation CDS 26724608 26724770 . + 1 Parent=GSCOCT00033773001 | |
| 51830 chr10 manual_curation CDS 26724874 26724991 . + 2 Parent=GSCOCT00033773001 | |
| 51831 chr10 manual_curation CDS 26725092 26725249 . + 0 Parent=GSCOCT00033773001 | |
| 51832 chr10 manual_curation CDS 26726010 26726094 . + 2 Parent=GSCOCT00033773001 | |
| 51833 chr10 manual_curation CDS 26726204 26726416 . + 0 Parent=GSCOCT00033773001 | |
| 51834 chr10 manual_curation CDS 26727113 26727174 . + 0 Parent=GSCOCT00033773001 | |
| 51835 chr10 manual_curation CDS 26727257 26728013 . + 2 Parent=GSCOCT00033773001 | |
| 51836 chr10 manual_curation gene 26744380 26745369 . - . ID=GSCOCG00033775001;Name=Cc10_g15800 | |
| 51837 chr10 manual_curation mRNA 26744380 26745369 . - . ID=GSCOCT00033775001;Parent=GSCOCG00033775001;Name=Cc10_g15800 | |
| 51838 chr10 manual_curation polypeptide 26744380 26745369 . - . ID=GSCOCP00033775001;Dbxref=InterPro:IPR005175,InterPro:IPR014476,PFAM:PF03479,PIR:PIRSF016021,SwissProt:Q9S7C9,TAIR:AT1G14490.1,TAIR:AT1G76500.1,TAIR:AT5G49700.1,TrEMBL:A1DR82,TrEMBL:A5B0M9,TrEMBL:I1K9M7;Derives_from=GSCOCT00033775001;Name=Cc10_g15800;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Predicted AT-hook DNA-binding family protein,CC_functional_completeness:modules,CC_gene:ESC;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033775001~ Predicted AT-hook DNA-binding family protein~ ESC~ modules;original_location=complement(1599382..1600371);owner=coffea | |
| 51839 chr10 manual_curation exon 26744380 26745369 . - . Parent=GSCOCT00033775001 | |
| 51840 chr10 manual_curation CDS 26744380 26745369 . - 0 Parent=GSCOCT00033775001 | |
| 51841 chr10 manual_curation gene 26752546 26758441 . - . ID=GSCOCG00033778001;Name=Cc10_g15810 | |
| 51842 chr10 manual_curation mRNA 26752546 26758441 . - . ID=GSCOCT00033778001;Parent=GSCOCG00033778001;Name=Cc10_g15810 | |
| 51843 chr10 manual_curation polypeptide 26752679 26758331 . - . ID=GSCOCP00033778001;Dbxref=InterPro:IPR001392,InterPro:IPR008968,InterPro:IPR011012,InterPro:IPR022775,PFAM:PF00928,PFAM:PF01217,PIR:PIRSF005992,PRINTS:PR00314,PROFILE:PS51072,SUPERFAMILY:SSF49447,SUPERFAMILY:SSF64356,SwissProt:O00189,SwissProt:Q29RY8,SwissProt:Q9JKC7,TAIR:AT1G10730.1,TAIR:AT1G60780.1,TAIR:AT4G24550.2,TrEMBL:B9GN34,TrEMBL:D7M8T1,TrEMBL:Q9SB50;Derives_from=GSCOCT00033778001;Name=Cc10_g15810;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0006810,GO:0006886,GO:0016192,GO:0030131,CC_EC_number:missing_EC_number,PRODUCT:Putative AP-4 complex subunit mu-1,CC_functional_completeness:complete,CC_gene:AP4M1,CC_gene:Ap4m1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033778001~ Putative AP-4 complex subunit mu-1~ AP4M1~ complete;original_location=complement(join(1613276..1613333%2C1612572..1612666%2C1611942..1612145%2C1611430..1611546%2C1611191..1611319%2C1610034..1610160%2C1609699..1609802%2C1609496..1609600%2C1609164..1609258%2C1608336..1608363%2C1608093..1608153%2C1607910..1607983%2C1607681..1607779));owner=coffea | |
| 51844 chr10 manual_curation exon 26752546 26752777 . - . Parent=GSCOCT00033778001 | |
| 51845 chr10 manual_curation exon 26752908 26752981 . - . Parent=GSCOCT00033778001 | |
| 51846 chr10 manual_curation exon 26753091 26753151 . - . Parent=GSCOCT00033778001 | |
| 51847 chr10 manual_curation exon 26753334 26753361 . - . Parent=GSCOCT00033778001 | |
| 51848 chr10 manual_curation exon 26754162 26754256 . - . Parent=GSCOCT00033778001 | |
| 51849 chr10 manual_curation exon 26754494 26754598 . - . Parent=GSCOCT00033778001 | |
| 51850 chr10 manual_curation exon 26754697 26754800 . - . Parent=GSCOCT00033778001 | |
| 51851 chr10 manual_curation exon 26755032 26755158 . - . Parent=GSCOCT00033778001 | |
| 51852 chr10 manual_curation exon 26756189 26756317 . - . Parent=GSCOCT00033778001 | |
| 51853 chr10 manual_curation exon 26756428 26756544 . - . Parent=GSCOCT00033778001 | |
| 51854 chr10 manual_curation exon 26756940 26757143 . - . Parent=GSCOCT00033778001 | |
| 51855 chr10 manual_curation exon 26757570 26757664 . - . Parent=GSCOCT00033778001 | |
| 51856 chr10 manual_curation exon 26758274 26758441 . - . Parent=GSCOCT00033778001 | |
| 51857 chr10 manual_curation CDS 26752679 26752777 . - 0 Parent=GSCOCT00033778001 | |
| 51858 chr10 manual_curation CDS 26752908 26752981 . - 1 Parent=GSCOCT00033778001 | |
| 51859 chr10 manual_curation CDS 26753091 26753151 . - 0 Parent=GSCOCT00033778001 | |
| 51860 chr10 manual_curation CDS 26753334 26753361 . - 2 Parent=GSCOCT00033778001 | |
| 51861 chr10 manual_curation CDS 26754162 26754256 . - 0 Parent=GSCOCT00033778001 | |
| 51862 chr10 manual_curation CDS 26754494 26754598 . - 0 Parent=GSCOCT00033778001 | |
| 51863 chr10 manual_curation CDS 26754697 26754800 . - 1 Parent=GSCOCT00033778001 | |
| 51864 chr10 manual_curation CDS 26755032 26755158 . - 0 Parent=GSCOCT00033778001 | |
| 51865 chr10 manual_curation CDS 26756189 26756317 . - 0 Parent=GSCOCT00033778001 | |
| 51866 chr10 manual_curation CDS 26756428 26756544 . - 0 Parent=GSCOCT00033778001 | |
| 51867 chr10 manual_curation CDS 26756940 26757143 . - 0 Parent=GSCOCT00033778001 | |
| 51868 chr10 manual_curation CDS 26757570 26757664 . - 1 Parent=GSCOCT00033778001 | |
| 51869 chr10 manual_curation CDS 26758274 26758331 . - 0 Parent=GSCOCT00033778001 | |
| 51870 chr10 manual_curation gene 26772059 26776834 . - . ID=GSCOCG00033781001;Name=Cc10_g15820 | |
| 51871 chr10 manual_curation mRNA 26772059 26776834 . - . ID=GSCOCT00033781001;Parent=GSCOCG00033781001;Name=Cc10_g15820 | |
| 51872 chr10 manual_curation polypeptide 26772190 26774761 . - . ID=GSCOCP00033781001;Derives_from=GSCOCT00033781001;Name=Cc10_g15820;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033781001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1629755..1629763%2C1629585..1629630%2C1628874..1628959%2C1628388..1628540%2C1628235..1628291%2C1628043..1628147%2C1627785..1627937%2C1627577..1627687%2C1627409..1627471%2C1627192..1627311));owner=coffea | |
| 51873 chr10 manual_curation exon 26774916 26775097 . - . Parent=GSCOCT00033781001 | |
| 51874 chr10 manual_curation exon 26776609 26776834 . - . Parent=GSCOCT00033781001 | |
| 51875 chr10 manual_curation exon 26772059 26772309 . - . Parent=GSCOCT00033781001 | |
| 51876 chr10 manual_curation exon 26772407 26772469 . - . Parent=GSCOCT00033781001 | |
| 51877 chr10 manual_curation exon 26772575 26772685 . - . Parent=GSCOCT00033781001 | |
| 51878 chr10 manual_curation exon 26772783 26772935 . - . Parent=GSCOCT00033781001 | |
| 51879 chr10 manual_curation exon 26773041 26773145 . - . Parent=GSCOCT00033781001 | |
| 51880 chr10 manual_curation exon 26773233 26773289 . - . Parent=GSCOCT00033781001 | |
| 51881 chr10 manual_curation exon 26773386 26773538 . - . Parent=GSCOCT00033781001 | |
| 51882 chr10 manual_curation exon 26773872 26773957 . - . Parent=GSCOCT00033781001 | |
| 51883 chr10 manual_curation exon 26774583 26774628 . - . Parent=GSCOCT00033781001 | |
| 51884 chr10 manual_curation exon 26774753 26774809 . - . Parent=GSCOCT00033781001 | |
| 51885 chr10 manual_curation CDS 26772190 26772309 . - 0 Parent=GSCOCT00033781001 | |
| 51886 chr10 manual_curation CDS 26772407 26772469 . - 0 Parent=GSCOCT00033781001 | |
| 51887 chr10 manual_curation CDS 26772575 26772685 . - 0 Parent=GSCOCT00033781001 | |
| 51888 chr10 manual_curation CDS 26772783 26772935 . - 0 Parent=GSCOCT00033781001 | |
| 51889 chr10 manual_curation CDS 26773041 26773145 . - 0 Parent=GSCOCT00033781001 | |
| 51890 chr10 manual_curation CDS 26773233 26773289 . - 0 Parent=GSCOCT00033781001 | |
| 51891 chr10 manual_curation CDS 26773386 26773538 . - 0 Parent=GSCOCT00033781001 | |
| 51892 chr10 manual_curation CDS 26773872 26773957 . - 1 Parent=GSCOCT00033781001 | |
| 51893 chr10 manual_curation CDS 26774583 26774628 . - 0 Parent=GSCOCT00033781001 | |
| 51894 chr10 manual_curation CDS 26774753 26774761 . - 0 Parent=GSCOCT00033781001 | |
| 51895 chr10 manual_curation gene 26782314 26784036 . + . ID=GSCOCG00033783001;Name=Cc10_g15830 | |
| 51896 chr10 manual_curation mRNA 26782314 26784036 . + . ID=GSCOCT00033783001;Parent=GSCOCG00033783001;Name=Cc10_g15830 | |
| 51897 chr10 manual_curation polypeptide 26783465 26783851 . + . ID=GSCOCP00033783001;Dbxref=SwissProt:Q8L8Q8,TAIR:AT5G64816.1,TrEMBL:B9GN37,TrEMBL:B9H6V7,TrEMBL:B9SN04;Derives_from=GSCOCT00033783001;Name=Cc10_g15830;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterized protein At5g64816,CC_functional_completeness:complete,CC_gene:At5g64816;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033783001~ Uncharacterized protein At5g64816~ At5g64816~ complete;original_location=1638467..1638853;owner=coffea | |
| 51898 chr10 manual_curation exon 26782314 26784036 . + . Parent=GSCOCT00033783001 | |
| 51899 chr10 manual_curation CDS 26783465 26783851 . + 0 Parent=GSCOCT00033783001 | |
| 51900 chr10 manual_curation gene 26785230 26786339 . - . ID=GSCOCG00033785001;Name=Cc10_g15840 | |
| 51901 chr10 manual_curation mRNA 26785230 26786339 . - . ID=GSCOCT00033785001;Parent=GSCOCG00033785001;Name=Cc10_g15840 | |
| 51902 chr10 manual_curation polypeptide 26785230 26786339 . - . ID=GSCOCP00033785001;Dbxref=GENE3D:G3DSA:1.10.287.110,InterPro:IPR001623,InterPro:IPR003095,InterPro:IPR015609,InterPro:IPR018253,PANTHER:PTHR11821,PFAM:PF00226,PRINTS:PR00625,PROFILE:PS50076,PROSITE:PS00636,SMART:SM00271,SUPERFAMILY:SSF46565,TAIR:AT2G01710.1,TAIR:AT5G37380.1,TAIR:AT5G64360.3,TrEMBL:A6XN08,TrEMBL:B9RJW9,TrEMBL:F6H128;Derives_from=GSCOCT00033785001;Name=Cc10_g15840;Ontology_term=CC_evidence_code:ISS,GO:0006457,GO:0031072,GO:0051082,CC_EC_number:missing_EC_number,PRODUCT:Putative Chaperone DnaJ-domain superfamily protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033785001~ Putative Chaperone DnaJ-domain superfamily protein~ unknown_gene~ fragment;original_location=complement(1640232..1641341);owner=coffea | |
| 51903 chr10 manual_curation exon 26785230 26786339 . - . Parent=GSCOCT00033785001 | |
| 51904 chr10 manual_curation CDS 26785230 26786339 . - 0 Parent=GSCOCT00033785001 | |
| 51905 chr10 manual_curation gene 26801966 26811308 . + . ID=GSCOCG00033786001;Name=Cc10_g15850 | |
| 51906 chr10 manual_curation mRNA 26801966 26811308 . + . ID=GSCOCT00033786001;Parent=GSCOCG00033786001;Name=Cc10_g15850 | |
| 51907 chr10 manual_curation polypeptide 26802652 26810684 . + . ID=GSCOCP00033786001;Dbxref=InterPro:IPR002100,InterPro:IPR002487,PFAM:PF00319,PFAM:PF01486,PRINTS:PR00404,PROFILE:PS50066,PROFILE:PS51297,PROSITE:PS00350,SMART:SM00432,SUPERFAMILY:SSF55455,SwissProt:O82794,SwissProt:Q9FUY6,SwissProt:Q9FVC1,TAIR:AT2G22540.1,TAIR:AT3G57230.1,TAIR:AT4G24540.1,TrEMBL:B9GN39,TrEMBL:E9JTW2,TrEMBL:Q6RF31;Derives_from=GSCOCT00033786001;Name=Cc10_g15850;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0005634,GO:0043565,CC_EC_number:missing_EC_number,PRODUCT:MADS-box protein SVP,CC_functional_completeness:complete,CC_gene:SVP,CC_gene:J,CC_gene:AGL24;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033786001~ MADS-box protein SVP~ SVP~ complete;original_location=join(1657654..1657835%2C1663010..1663088%2C1664115..1664176%2C1664276..1664375%2C1664466..1664507%2C1664662..1664703%2C1664785..1664945%2C1665671..1665686);owner=coffea | |
| 51908 chr10 manual_curation exon 26801966 26802833 . + . Parent=GSCOCT00033786001 | |
| 51909 chr10 manual_curation exon 26808008 26808086 . + . Parent=GSCOCT00033786001 | |
| 51910 chr10 manual_curation exon 26809113 26809174 . + . Parent=GSCOCT00033786001 | |
| 51911 chr10 manual_curation exon 26809274 26809373 . + . Parent=GSCOCT00033786001 | |
| 51912 chr10 manual_curation exon 26809464 26809505 . + . Parent=GSCOCT00033786001 | |
| 51913 chr10 manual_curation exon 26809660 26809701 . + . Parent=GSCOCT00033786001 | |
| 51914 chr10 manual_curation exon 26809783 26809943 . + . Parent=GSCOCT00033786001 | |
| 51915 chr10 manual_curation exon 26810669 26811308 . + . Parent=GSCOCT00033786001 | |
| 51916 chr10 manual_curation CDS 26802652 26802833 . + 0 Parent=GSCOCT00033786001 | |
| 51917 chr10 manual_curation CDS 26808008 26808086 . + 2 Parent=GSCOCT00033786001 | |
| 51918 chr10 manual_curation CDS 26809113 26809174 . + 0 Parent=GSCOCT00033786001 | |
| 51919 chr10 manual_curation CDS 26809274 26809373 . + 2 Parent=GSCOCT00033786001 | |
| 51920 chr10 manual_curation CDS 26809464 26809505 . + 0 Parent=GSCOCT00033786001 | |
| 51921 chr10 manual_curation CDS 26809660 26809701 . + 0 Parent=GSCOCT00033786001 | |
| 51922 chr10 manual_curation CDS 26809783 26809943 . + 0 Parent=GSCOCT00033786001 | |
| 51923 chr10 manual_curation CDS 26810669 26810684 . + 2 Parent=GSCOCT00033786001 | |
| 51924 chr10 manual_curation gene 26814273 26819231 . + . ID=GSCOCG00033787001;Name=Cc10_g15860 | |
| 51925 chr10 manual_curation mRNA 26814273 26819231 . + . ID=GSCOCT00033787001;Parent=GSCOCG00033787001;Name=Cc10_g15860 | |
| 51926 chr10 manual_curation polypeptide 26814440 26818583 . + . ID=GSCOCP00033787001;Dbxref=InterPro:IPR019378,PFAM:PF10250,SwissProt:Q8W486,TAIR:AT1G35510.1,TAIR:AT4G24530.1,TAIR:AT5G65470.1,TrEMBL:B9RJX2,TrEMBL:D7M8T3,TrEMBL:E0CRW1;Derives_from=GSCOCT00033787001;Name=Cc10_g15860;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative DUF246 domain-containing protein At1g04910,CC_functional_completeness:complete,CC_gene:At1g04910;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033787001~ Putative DUF246 domain-containing protein At1g04910~ At1g04910~ complete;original_location=join(1669442..1669579%2C1670134..1670196%2C1670293..1670374%2C1670516..1670586%2C1670726..1670814%2C1670894..1671097%2C1672067..1672331%2C1672731..1672958%2C1673069..1673266%2C1673376..1673585);owner=coffea | |
| 51927 chr10 manual_curation exon 26814273 26814577 . + . Parent=GSCOCT00033787001 | |
| 51928 chr10 manual_curation exon 26815132 26815194 . + . Parent=GSCOCT00033787001 | |
| 51929 chr10 manual_curation exon 26815291 26815372 . + . Parent=GSCOCT00033787001 | |
| 51930 chr10 manual_curation exon 26815514 26815584 . + . Parent=GSCOCT00033787001 | |
| 51931 chr10 manual_curation exon 26815724 26815812 . + . Parent=GSCOCT00033787001 | |
| 51932 chr10 manual_curation exon 26815892 26816095 . + . Parent=GSCOCT00033787001 | |
| 51933 chr10 manual_curation exon 26817065 26817329 . + . Parent=GSCOCT00033787001 | |
| 51934 chr10 manual_curation exon 26817729 26817956 . + . Parent=GSCOCT00033787001 | |
| 51935 chr10 manual_curation exon 26818067 26818264 . + . Parent=GSCOCT00033787001 | |
| 51936 chr10 manual_curation exon 26818374 26819231 . + . Parent=GSCOCT00033787001 | |
| 51937 chr10 manual_curation CDS 26814440 26814577 . + 0 Parent=GSCOCT00033787001 | |
| 51938 chr10 manual_curation CDS 26815132 26815194 . + 0 Parent=GSCOCT00033787001 | |
| 51939 chr10 manual_curation CDS 26815291 26815372 . + 0 Parent=GSCOCT00033787001 | |
| 51940 chr10 manual_curation CDS 26815514 26815584 . + 1 Parent=GSCOCT00033787001 | |
| 51941 chr10 manual_curation CDS 26815724 26815812 . + 0 Parent=GSCOCT00033787001 | |
| 51942 chr10 manual_curation CDS 26815892 26816095 . + 2 Parent=GSCOCT00033787001 | |
| 51943 chr10 manual_curation CDS 26817065 26817329 . + 2 Parent=GSCOCT00033787001 | |
| 51944 chr10 manual_curation CDS 26817729 26817956 . + 0 Parent=GSCOCT00033787001 | |
| 51945 chr10 manual_curation CDS 26818067 26818264 . + 0 Parent=GSCOCT00033787001 | |
| 51946 chr10 manual_curation CDS 26818374 26818583 . + 0 Parent=GSCOCT00033787001 | |
| 51947 chr10 manual_curation gene 26822601 26829491 . - . ID=GSCOCG00033789001;Name=Cc10_g15870 | |
| 51948 chr10 manual_curation mRNA 26822601 26829491 . - . ID=GSCOCT00033789001;Parent=GSCOCG00033789001;Name=Cc10_g15870 | |
| 51949 chr10 manual_curation polypeptide 26822787 26828455 . - . ID=GSCOCP00033789001;Dbxref=InterPro:IPR006685,InterPro:IPR010920,PFAM:PF00924,SUPERFAMILY:SSF50182,SwissProt:P0AEB5,SwissProt:Q56X46,SwissProt:Q8L7W1,TAIR:AT1G58200.1,TAIR:AT4G00290.1,TAIR:AT5G10490.1,TrEMBL:B9GN42,TrEMBL:B9RJX3,TrEMBL:F6H132;Derives_from=GSCOCT00033789001;Name=Cc10_g15870;Ontology_term=CC_evidence_code:ISS,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Mechanosensitive ion channel protein 3%2C chloroplastic,CC_functional_completeness:complete,CC_gene:MSL3,CC_gene:MSL2,CC_gene:ynaI;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033789001~ Mechanosensitive ion channel protein 3%2C chloroplastic~ MSL3~ complete;original_location=complement(join(1683365..1683457%2C1683225..1683284%2C1682649..1682806%2C1682327..1682450%2C1682133..1682230%2C1681929..1682042%2C1681047..1681107%2C1680378..1680527%2C1680133..1680243%2C1679815..1679982%2C1679613..1679726%2C1679143..1679199%2C1678188..1678667%2C1677789..1678121));owner=coffea | |
| 51950 chr10 manual_curation exon 26822601 26823119 . - . Parent=GSCOCT00033789001 | |
| 51951 chr10 manual_curation exon 26823186 26823665 . - . Parent=GSCOCT00033789001 | |
| 51952 chr10 manual_curation exon 26824141 26824197 . - . Parent=GSCOCT00033789001 | |
| 51953 chr10 manual_curation exon 26824611 26824724 . - . Parent=GSCOCT00033789001 | |
| 51954 chr10 manual_curation exon 26824813 26824980 . - . Parent=GSCOCT00033789001 | |
| 51955 chr10 manual_curation exon 26825131 26825241 . - . Parent=GSCOCT00033789001 | |
| 51956 chr10 manual_curation exon 26825376 26825525 . - . Parent=GSCOCT00033789001 | |
| 51957 chr10 manual_curation exon 26826045 26826105 . - . Parent=GSCOCT00033789001 | |
| 51958 chr10 manual_curation exon 26826927 26827040 . - . Parent=GSCOCT00033789001 | |
| 51959 chr10 manual_curation exon 26827131 26827228 . - . Parent=GSCOCT00033789001 | |
| 51960 chr10 manual_curation exon 26827325 26827448 . - . Parent=GSCOCT00033789001 | |
| 51961 chr10 manual_curation exon 26827647 26827804 . - . Parent=GSCOCT00033789001 | |
| 51962 chr10 manual_curation exon 26828223 26828282 . - . Parent=GSCOCT00033789001 | |
| 51963 chr10 manual_curation exon 26828363 26829491 . - . Parent=GSCOCT00033789001 | |
| 51964 chr10 manual_curation CDS 26822787 26823119 . - 0 Parent=GSCOCT00033789001 | |
| 51965 chr10 manual_curation CDS 26823186 26823665 . - 0 Parent=GSCOCT00033789001 | |
| 51966 chr10 manual_curation CDS 26824141 26824197 . - 0 Parent=GSCOCT00033789001 | |
| 51967 chr10 manual_curation CDS 26824611 26824724 . - 0 Parent=GSCOCT00033789001 | |
| 51968 chr10 manual_curation CDS 26824813 26824980 . - 0 Parent=GSCOCT00033789001 | |
| 51969 chr10 manual_curation CDS 26825131 26825241 . - 0 Parent=GSCOCT00033789001 | |
| 51970 chr10 manual_curation CDS 26825376 26825525 . - 0 Parent=GSCOCT00033789001 | |
| 51971 chr10 manual_curation CDS 26826045 26826105 . - 2 Parent=GSCOCT00033789001 | |
| 51972 chr10 manual_curation CDS 26826927 26827040 . - 2 Parent=GSCOCT00033789001 | |
| 51973 chr10 manual_curation CDS 26827131 26827228 . - 0 Parent=GSCOCT00033789001 | |
| 51974 chr10 manual_curation CDS 26827325 26827448 . - 2 Parent=GSCOCT00033789001 | |
| 51975 chr10 manual_curation CDS 26827647 26827804 . - 0 Parent=GSCOCT00033789001 | |
| 51976 chr10 manual_curation CDS 26828223 26828282 . - 0 Parent=GSCOCT00033789001 | |
| 51977 chr10 manual_curation CDS 26828363 26828455 . - 0 Parent=GSCOCT00033789001 | |
| 51978 chr10 manual_curation gene 26832973 26843938 . + . ID=GSCOCG00033790001;Name=Cc10_g15880 | |
| 51979 chr10 manual_curation mRNA 26832973 26843938 . + . ID=GSCOCT00033790001;Parent=GSCOCG00033790001;Name=Cc10_g15880 | |
| 51980 chr10 manual_curation polypeptide 26832973 26843516 . + . ID=GSCOCP00033790001;Dbxref=GENE3D:G3DSA:3.40.850.10,InterPro:IPR001752,InterPro:IPR019821,PFAM:PF00225,PRINTS:PR00380,PROFILE:PS50067,PROSITE:PS00411,SMART:SM00129,SwissProt:O95239,SwissProt:P33174,SwissProt:Q91784,TAIR:AT3G50240.1,TAIR:AT5G47820.1,TAIR:AT5G60930.1,TrEMBL:B9GN43,TrEMBL:B9NB39,TrEMBL:B9RJX4;Derives_from=GSCOCT00033790001;Name=Cc10_g15880;Ontology_term=CC_evidence_code:ISS,GO:0003777,GO:0005524,GO:0007018,CC_EC_number:missing_EC_number,PRODUCT:P-loop containing nucleoside triphosphate hydrolases superfamily protein,CC_functional_completeness:complete,CC_gene:kif4,CC_gene:KIF4A,CC_gene:Kif4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033790001~ P-loop containing nucleoside triphosphate hydrolases superfamily protein~ kif4~ complete;original_location=join(1687975..1688103%2C1688295..1688441%2C1688539..1688691%2C1688792..1689042%2C1690189..1690367%2C1690498..1690631%2C1691248..1691284%2C1691435..1691526%2C1691602..1691718%2C1691936..1692049%2C1692149..1692232%2C1692308..1692494%2C1692746..1692846%2C1692952..1693050%2C1693118..1693231%2C1693298..1693414%2C1693495..1693575%2C1694522..1694593%2C1694679..1694769%2C1694868..1694899%2C1695065..1695150%2C1695927..1695998%2C1696111..1696329%2C1696419..1696554%2C1697184..1697279%2C1697430..1698077%2C1698189..1698518);owner=coffea | |
| 51981 chr10 manual_curation exon 26832973 26833101 . + . Parent=GSCOCT00033790001 | |
| 51982 chr10 manual_curation exon 26833293 26833439 . + . Parent=GSCOCT00033790001 | |
| 51983 chr10 manual_curation exon 26833537 26833689 . + . Parent=GSCOCT00033790001 | |
| 51984 chr10 manual_curation exon 26833790 26834040 . + . Parent=GSCOCT00033790001 | |
| 51985 chr10 manual_curation exon 26835187 26835365 . + . Parent=GSCOCT00033790001 | |
| 51986 chr10 manual_curation exon 26835496 26835629 . + . Parent=GSCOCT00033790001 | |
| 51987 chr10 manual_curation exon 26836246 26836282 . + . Parent=GSCOCT00033790001 | |
| 51988 chr10 manual_curation exon 26836433 26836524 . + . Parent=GSCOCT00033790001 | |
| 51989 chr10 manual_curation exon 26836600 26836716 . + . Parent=GSCOCT00033790001 | |
| 51990 chr10 manual_curation exon 26836934 26837047 . + . Parent=GSCOCT00033790001 | |
| 51991 chr10 manual_curation exon 26837147 26837230 . + . Parent=GSCOCT00033790001 | |
| 51992 chr10 manual_curation exon 26837306 26837492 . + . Parent=GSCOCT00033790001 | |
| 51993 chr10 manual_curation exon 26837744 26837844 . + . Parent=GSCOCT00033790001 | |
| 51994 chr10 manual_curation exon 26837950 26838048 . + . Parent=GSCOCT00033790001 | |
| 51995 chr10 manual_curation exon 26838116 26838229 . + . Parent=GSCOCT00033790001 | |
| 51996 chr10 manual_curation exon 26838296 26838412 . + . Parent=GSCOCT00033790001 | |
| 51997 chr10 manual_curation exon 26838493 26838573 . + . Parent=GSCOCT00033790001 | |
| 51998 chr10 manual_curation exon 26839520 26839591 . + . Parent=GSCOCT00033790001 | |
| 51999 chr10 manual_curation exon 26839677 26839767 . + . Parent=GSCOCT00033790001 | |
| 52000 chr10 manual_curation exon 26839866 26839897 . + . Parent=GSCOCT00033790001 | |
| 52001 chr10 manual_curation exon 26840063 26840148 . + . Parent=GSCOCT00033790001 | |
| 52002 chr10 manual_curation exon 26840925 26840996 . + . Parent=GSCOCT00033790001 | |
| 52003 chr10 manual_curation exon 26841109 26841327 . + . Parent=GSCOCT00033790001 | |
| 52004 chr10 manual_curation exon 26841417 26841552 . + . Parent=GSCOCT00033790001 | |
| 52005 chr10 manual_curation exon 26842182 26842277 . + . Parent=GSCOCT00033790001 | |
| 52006 chr10 manual_curation exon 26842428 26843075 . + . Parent=GSCOCT00033790001 | |
| 52007 chr10 manual_curation exon 26843187 26843938 . + . Parent=GSCOCT00033790001 | |
| 52008 chr10 manual_curation CDS 26832973 26833101 . + 0 Parent=GSCOCT00033790001 | |
| 52009 chr10 manual_curation CDS 26833293 26833439 . + 0 Parent=GSCOCT00033790001 | |
| 52010 chr10 manual_curation CDS 26833537 26833689 . + 0 Parent=GSCOCT00033790001 | |
| 52011 chr10 manual_curation CDS 26833790 26834040 . + 0 Parent=GSCOCT00033790001 | |
| 52012 chr10 manual_curation CDS 26835187 26835365 . + 2 Parent=GSCOCT00033790001 | |
| 52013 chr10 manual_curation CDS 26835496 26835629 . + 1 Parent=GSCOCT00033790001 | |
| 52014 chr10 manual_curation CDS 26836246 26836282 . + 0 Parent=GSCOCT00033790001 | |
| 52015 chr10 manual_curation CDS 26836433 26836524 . + 1 Parent=GSCOCT00033790001 | |
| 52016 chr10 manual_curation CDS 26836600 26836716 . + 0 Parent=GSCOCT00033790001 | |
| 52017 chr10 manual_curation CDS 26836934 26837047 . + 0 Parent=GSCOCT00033790001 | |
| 52018 chr10 manual_curation CDS 26837147 26837230 . + 0 Parent=GSCOCT00033790001 | |
| 52019 chr10 manual_curation CDS 26837306 26837492 . + 0 Parent=GSCOCT00033790001 | |
| 52020 chr10 manual_curation CDS 26837744 26837844 . + 1 Parent=GSCOCT00033790001 | |
| 52021 chr10 manual_curation CDS 26837950 26838048 . + 0 Parent=GSCOCT00033790001 | |
| 52022 chr10 manual_curation CDS 26838116 26838229 . + 0 Parent=GSCOCT00033790001 | |
| 52023 chr10 manual_curation CDS 26838296 26838412 . + 0 Parent=GSCOCT00033790001 | |
| 52024 chr10 manual_curation CDS 26838493 26838573 . + 0 Parent=GSCOCT00033790001 | |
| 52025 chr10 manual_curation CDS 26839520 26839591 . + 0 Parent=GSCOCT00033790001 | |
| 52026 chr10 manual_curation CDS 26839677 26839767 . + 0 Parent=GSCOCT00033790001 | |
| 52027 chr10 manual_curation CDS 26839866 26839897 . + 1 Parent=GSCOCT00033790001 | |
| 52028 chr10 manual_curation CDS 26840063 26840148 . + 0 Parent=GSCOCT00033790001 | |
| 52029 chr10 manual_curation CDS 26840925 26840996 . + 2 Parent=GSCOCT00033790001 | |
| 52030 chr10 manual_curation CDS 26841109 26841327 . + 2 Parent=GSCOCT00033790001 | |
| 52031 chr10 manual_curation CDS 26841417 26841552 . + 2 Parent=GSCOCT00033790001 | |
| 52032 chr10 manual_curation CDS 26842182 26842277 . + 0 Parent=GSCOCT00033790001 | |
| 52033 chr10 manual_curation CDS 26842428 26843075 . + 0 Parent=GSCOCT00033790001 | |
| 52034 chr10 manual_curation CDS 26843187 26843516 . + 0 Parent=GSCOCT00033790001 | |
| 52035 chr10 manual_curation gene 26844208 26848662 . - . ID=GSCOCG00033791001;Name=Cc10_g15890 | |
| 52036 chr10 manual_curation mRNA 26844208 26848662 . - . ID=GSCOCT00033791001;Parent=GSCOCG00033791001;Name=Cc10_g15890 | |
| 52037 chr10 manual_curation polypeptide 26844541 26848557 . - . ID=GSCOCP00033791001;Dbxref=HAMAP:MF_00006,InterPro:IPR000362,InterPro:IPR003031,InterPro:IPR008948,InterPro:IPR009049,InterPro:IPR020557,InterPro:IPR022761,PANTHER:PTHR11444:SF3,PFAM:PF00206,PRINTS:PR00145,PRINTS:PR00149,PROSITE:PS00163,SUPERFAMILY:SSF48557,SwissProt:Q3JDS2,SwissProt:Q6AR60,SwissProt:Q98G36,TAIR:AT5G10920.1,TIGRFAMs:TIGR00838,TrEMBL:B9RJX6,TrEMBL:E0CRW7,TrEMBL:I1JV68;Derives_from=GSCOCT00033791001;Name=Cc10_g15890;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004056,GO:0042450,CC_EC_number:4.3.2.1,PRODUCT:Argininosuccinate lyase,CC_functional_completeness:complete,CC_gene:argH,CC_gene:argH1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033791001~ Argininosuccinate lyase~ argH~ complete;original_location=complement(join(1703182..1703559%2C1702603..1702866%2C1702378..1702494%2C1701411..1701559%2C1700589..1700880%2C1700216..1700380%2C1699543..1699800));owner=coffea | |
| 52038 chr10 manual_curation exon 26844208 26844798 . - . Parent=GSCOCT00033791001 | |
| 52039 chr10 manual_curation exon 26845214 26845378 . - . Parent=GSCOCT00033791001 | |
| 52040 chr10 manual_curation exon 26845587 26845878 . - . Parent=GSCOCT00033791001 | |
| 52041 chr10 manual_curation exon 26846409 26846557 . - . Parent=GSCOCT00033791001 | |
| 52042 chr10 manual_curation exon 26847376 26847492 . - . Parent=GSCOCT00033791001 | |
| 52043 chr10 manual_curation exon 26847601 26847864 . - . Parent=GSCOCT00033791001 | |
| 52044 chr10 manual_curation exon 26848180 26848662 . - . Parent=GSCOCT00033791001 | |
| 52045 chr10 manual_curation CDS 26844541 26844798 . - 0 Parent=GSCOCT00033791001 | |
| 52046 chr10 manual_curation CDS 26845214 26845378 . - 0 Parent=GSCOCT00033791001 | |
| 52047 chr10 manual_curation CDS 26845587 26845878 . - 2 Parent=GSCOCT00033791001 | |
| 52048 chr10 manual_curation CDS 26846409 26846557 . - 0 Parent=GSCOCT00033791001 | |
| 52049 chr10 manual_curation CDS 26847376 26847492 . - 0 Parent=GSCOCT00033791001 | |
| 52050 chr10 manual_curation CDS 26847601 26847864 . - 0 Parent=GSCOCT00033791001 | |
| 52051 chr10 manual_curation CDS 26848180 26848557 . - 0 Parent=GSCOCT00033791001 | |
| 52052 chr10 manual_curation gene 26860855 26865293 . + . ID=GSCOCG00033794001;Name=Cc10_g15900 | |
| 52053 chr10 manual_curation mRNA 26860855 26865293 . + . ID=GSCOCT00033794001;Parent=GSCOCG00033794001;Name=Cc10_g15900 | |
| 52054 chr10 manual_curation polypeptide 26862188 26864576 . + . ID=GSCOCP00033794001;Dbxref=TAIR:AT4G38060.2,TrEMBL:B9GN46,TrEMBL:B9RJX7,TrEMBL:I1JH03;Derives_from=GSCOCT00033794001;Name=Cc10_g15900;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033794001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=join(1717190..1717661%2C1719529..1719578);owner=coffea | |
| 52055 chr10 manual_curation exon 26860855 26862659 . + . Parent=GSCOCT00033794001 | |
| 52056 chr10 manual_curation exon 26864527 26865293 . + . Parent=GSCOCT00033794001 | |
| 52057 chr10 manual_curation CDS 26862188 26862659 . + 0 Parent=GSCOCT00033794001 | |
| 52058 chr10 manual_curation CDS 26864527 26864576 . + 1 Parent=GSCOCT00033794001 | |
| 52059 chr10 manual_curation gene 26866324 26871561 . + . ID=GSCOCG00033795001;Name=Cc10_g15910 | |
| 52060 chr10 manual_curation mRNA 26866324 26871561 . + . ID=GSCOCT00033795001;Parent=GSCOCG00033795001;Name=Cc10_g15910 | |
| 52061 chr10 manual_curation polypeptide 26866561 26871561 . + . ID=GSCOCP00033795001;Dbxref=InterPro:IPR011684,PFAM:PF07765,TAIR:AT1G09720.1,TAIR:AT2G22560.1,TAIR:AT5G10500.1,TrEMBL:B9GN47,TrEMBL:B9T6U1,TrEMBL:F6H139;Derives_from=GSCOCT00033795001;Name=Cc10_g15910;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Kinase interacting (KIP1-like) family protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033795001~ Putative Kinase interacting (KIP1-like) family protein~ unknown_gene~ modules;original_location=join(1721563..1721656%2C1722349..1725087%2C1725162..1726420%2C1726477..1726563);owner=coffea | |
| 52062 chr10 manual_curation exon 26866324 26866654 . + . Parent=GSCOCT00033795001 | |
| 52063 chr10 manual_curation exon 26867347 26870085 . + . Parent=GSCOCT00033795001 | |
| 52064 chr10 manual_curation exon 26870160 26871418 . + . Parent=GSCOCT00033795001 | |
| 52065 chr10 manual_curation exon 26871475 26871561 . + . Parent=GSCOCT00033795001 | |
| 52066 chr10 manual_curation CDS 26866561 26866654 . + 0 Parent=GSCOCT00033795001 | |
| 52067 chr10 manual_curation CDS 26867347 26870085 . + 1 Parent=GSCOCT00033795001 | |
| 52068 chr10 manual_curation CDS 26870160 26871418 . + 1 Parent=GSCOCT00033795001 | |
| 52069 chr10 manual_curation CDS 26871475 26871561 . + 0 Parent=GSCOCT00033795001 | |
| 52070 chr10 manual_curation gene 26871662 26878004 . - . ID=GSCOCG00033796001;Name=Cc10_g15920 | |
| 52071 chr10 manual_curation mRNA 26871662 26878004 . - . ID=GSCOCT00033796001;Parent=GSCOCG00033796001;Name=Cc10_g15920 | |
| 52072 chr10 manual_curation polypeptide 26872060 26877673 . - . ID=GSCOCP00033796001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001005,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR017930,PROFILE:PS51294,SMART:SM00717,SUPERFAMILY:SSF46689,TAIR:AT1G09710.2,TAIR:AT1G58220.1,TrEMBL:B9GN48,TrEMBL:B9RJX9,TrEMBL:F6H140;Derives_from=GSCOCT00033796001;Name=Cc10_g15920;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033796001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=complement(join(1732605..1732675%2C1732288..1732483%2C1731804..1731890%2C1730633..1731001%2C1729003..1729156%2C1727062..1728197));owner=coffea | |
| 52073 chr10 manual_curation exon 26871662 26873195 . - . Parent=GSCOCT00033796001 | |
| 52074 chr10 manual_curation exon 26874001 26874154 . - . Parent=GSCOCT00033796001 | |
| 52075 chr10 manual_curation exon 26875631 26875999 . - . Parent=GSCOCT00033796001 | |
| 52076 chr10 manual_curation exon 26876802 26876888 . - . Parent=GSCOCT00033796001 | |
| 52077 chr10 manual_curation exon 26877286 26877481 . - . Parent=GSCOCT00033796001 | |
| 52078 chr10 manual_curation exon 26877603 26878004 . - . Parent=GSCOCT00033796001 | |
| 52079 chr10 manual_curation CDS 26872060 26873195 . - 1 Parent=GSCOCT00033796001 | |
| 52080 chr10 manual_curation CDS 26874001 26874154 . - 0 Parent=GSCOCT00033796001 | |
| 52081 chr10 manual_curation CDS 26875631 26875999 . - 0 Parent=GSCOCT00033796001 | |
| 52082 chr10 manual_curation CDS 26876802 26876888 . - 0 Parent=GSCOCT00033796001 | |
| 52083 chr10 manual_curation CDS 26877286 26877481 . - 2 Parent=GSCOCT00033796001 | |
| 52084 chr10 manual_curation CDS 26877603 26877673 . - 0 Parent=GSCOCT00033796001 | |
| 52085 chr10 manual_curation gene 26880646 26888180 . - . ID=GSCOCG00033798001;Name=Cc10_g15930 | |
| 52086 chr10 manual_curation mRNA 26880646 26888180 . - . ID=GSCOCT00033798001;Parent=GSCOCG00033798001;Name=Cc10_g15930 | |
| 52087 chr10 manual_curation polypeptide 26881040 26887916 . - . ID=GSCOCP00033798001;Dbxref=InterPro:IPR001094,InterPro:IPR001433,InterPro:IPR001709,InterPro:IPR003097,InterPro:IPR008254,InterPro:IPR015702,InterPro:IPR017927,InterPro:IPR017938,PANTHER:PTHR19384:SF17,PFAM:PF00175,PFAM:PF00258,PFAM:PF00667,PRINTS:PR00369,PRINTS:PR00371,PROFILE:PS50902,PROFILE:PS51384,SUPERFAMILY:SSF63380,SwissProt:P37116,SwissProt:Q05001,SwissProt:Q9SB48,TAIR:AT3G02280.1,TAIR:AT4G24520.1,TAIR:AT4G30210.1,TrEMBL:B5LAU2,TrEMBL:Q6PLI6,TrEMBL:Q8H0D6;Derives_from=GSCOCT00033798001;Name=Cc10_g15930;Ontology_term=CC_evidence_code:ISS,GO:0005506,GO:0010181,GO:0016491,GO:0055114,CC_EC_number:1.6.2.4,PRODUCT:NADPH--cytochrome P450 reductase,CC_functional_completeness:complete,CC_gene:ATR1,CC_gene:CPR;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033798001~ NADPH--cytochrome P450 reductase~ ATR1~ complete;original_location=complement(join(1742625..1742918%2C1741555..1741614%2C1741389..1741465%2C1741188..1741245%2C1741004..1741090%2C1740803..1740839%2C1739450..1739519%2C1739094..1739288%2C1738900..1738992%2C1738134..1738359%2C1737919..1738002%2C1737558..1737709%2C1737364..1737460%2C1737112..1737261%2C1736958..1737035%2C1736741..1736863%2C1736545..1736658%2C1736042..1736122));owner=coffea | |
| 52088 chr10 manual_curation exon 26880646 26881120 . - . Parent=GSCOCT00033798001 | |
| 52089 chr10 manual_curation exon 26881543 26881656 . - . Parent=GSCOCT00033798001 | |
| 52090 chr10 manual_curation exon 26881739 26881861 . - . Parent=GSCOCT00033798001 | |
| 52091 chr10 manual_curation exon 26881956 26882033 . - . Parent=GSCOCT00033798001 | |
| 52092 chr10 manual_curation exon 26882110 26882259 . - . Parent=GSCOCT00033798001 | |
| 52093 chr10 manual_curation exon 26882362 26882458 . - . Parent=GSCOCT00033798001 | |
| 52094 chr10 manual_curation exon 26882556 26882707 . - . Parent=GSCOCT00033798001 | |
| 52095 chr10 manual_curation exon 26882917 26883000 . - . Parent=GSCOCT00033798001 | |
| 52096 chr10 manual_curation exon 26883132 26883357 . - . Parent=GSCOCT00033798001 | |
| 52097 chr10 manual_curation exon 26883898 26883990 . - . Parent=GSCOCT00033798001 | |
| 52098 chr10 manual_curation exon 26884092 26884286 . - . Parent=GSCOCT00033798001 | |
| 52099 chr10 manual_curation exon 26884448 26884517 . - . Parent=GSCOCT00033798001 | |
| 52100 chr10 manual_curation exon 26885801 26885837 . - . Parent=GSCOCT00033798001 | |
| 52101 chr10 manual_curation exon 26886002 26886088 . - . Parent=GSCOCT00033798001 | |
| 52102 chr10 manual_curation exon 26886186 26886243 . - . Parent=GSCOCT00033798001 | |
| 52103 chr10 manual_curation exon 26886387 26886463 . - . Parent=GSCOCT00033798001 | |
| 52104 chr10 manual_curation exon 26886553 26886612 . - . Parent=GSCOCT00033798001 | |
| 52105 chr10 manual_curation exon 26887623 26888180 . - . Parent=GSCOCT00033798001 | |
| 52106 chr10 manual_curation CDS 26881040 26881120 . - 0 Parent=GSCOCT00033798001 | |
| 52107 chr10 manual_curation CDS 26881543 26881656 . - 0 Parent=GSCOCT00033798001 | |
| 52108 chr10 manual_curation CDS 26881739 26881861 . - 0 Parent=GSCOCT00033798001 | |
| 52109 chr10 manual_curation CDS 26881956 26882033 . - 0 Parent=GSCOCT00033798001 | |
| 52110 chr10 manual_curation CDS 26882110 26882259 . - 0 Parent=GSCOCT00033798001 | |
| 52111 chr10 manual_curation CDS 26882362 26882458 . - 2 Parent=GSCOCT00033798001 | |
| 52112 chr10 manual_curation CDS 26882556 26882707 . - 0 Parent=GSCOCT00033798001 | |
| 52113 chr10 manual_curation CDS 26882917 26883000 . - 0 Parent=GSCOCT00033798001 | |
| 52114 chr10 manual_curation CDS 26883132 26883357 . - 2 Parent=GSCOCT00033798001 | |
| 52115 chr10 manual_curation CDS 26883898 26883990 . - 2 Parent=GSCOCT00033798001 | |
| 52116 chr10 manual_curation CDS 26884092 26884286 . - 2 Parent=GSCOCT00033798001 | |
| 52117 chr10 manual_curation CDS 26884448 26884517 . - 1 Parent=GSCOCT00033798001 | |
| 52118 chr10 manual_curation CDS 26885801 26885837 . - 0 Parent=GSCOCT00033798001 | |
| 52119 chr10 manual_curation CDS 26886002 26886088 . - 0 Parent=GSCOCT00033798001 | |
| 52120 chr10 manual_curation CDS 26886186 26886243 . - 2 Parent=GSCOCT00033798001 | |
| 52121 chr10 manual_curation CDS 26886387 26886463 . - 0 Parent=GSCOCT00033798001 | |
| 52122 chr10 manual_curation CDS 26886553 26886612 . - 0 Parent=GSCOCT00033798001 | |
| 52123 chr10 manual_curation CDS 26887623 26887916 . - 0 Parent=GSCOCT00033798001 | |
| 52124 chr10 manual_curation gene 26893067 26897634 . - . ID=GSCOCG00033799001;Name=Cc10_g15940 | |
| 52125 chr10 manual_curation mRNA 26893067 26897634 . - . ID=GSCOCT00033799001;Parent=GSCOCG00033799001;Name=Cc10_g15940 | |
| 52126 chr10 manual_curation polypeptide 26893310 26897491 . - . ID=GSCOCP00033799001;Dbxref=InterPro:IPR003480,PFAM:PF02458,SwissProt:Q8GSM7,SwissProt:Q94CD1,SwissProt:Q9FI78,TAIR:AT3G23840.1,TAIR:AT4G13840.1,TAIR:AT4G24510.1,TrEMBL:B9RJY1,TrEMBL:E0CRX2,TrEMBL:F6GWE4;Derives_from=GSCOCT00033799001;Name=Cc10_g15940;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.3.1.144,PRODUCT:Putative HXXXD-type acyl-transferase family protein,CC_functional_completeness:complete,CC_gene:HCT,CC_gene:HHT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033799001~ Putative HXXXD-type acyl-transferase family protein~ HCT~ complete;original_location=complement(join(1752062..1752493%2C1748312..1749199));owner=coffea | |
| 52127 chr10 manual_curation exon 26893067 26894197 . - . Parent=GSCOCT00033799001 | |
| 52128 chr10 manual_curation exon 26897060 26897634 . - . Parent=GSCOCT00033799001 | |
| 52129 chr10 manual_curation CDS 26893310 26894197 . - 0 Parent=GSCOCT00033799001 | |
| 52130 chr10 manual_curation CDS 26897060 26897491 . - 0 Parent=GSCOCT00033799001 | |
| 52131 chr10 manual_curation gene 26902597 26906716 . + . ID=GSCOCG00033800001;Name=Cc10_g15950 | |
| 52132 chr10 manual_curation mRNA 26902597 26906716 . + . ID=GSCOCT00033800001;Parent=GSCOCG00033800001;Name=Cc10_g15950 | |
| 52133 chr10 manual_curation polypeptide 26902802 26906716 . + . ID=GSCOCP00033800001;Dbxref=InterPro:IPR004082,PFAM:PF07227,SwissProt:Q9FIE3,TAIR:AT3G24440.1,TAIR:AT4G30200.2,TAIR:AT5G57380.1,TrEMBL:B9RJY2,TrEMBL:F6H141,TrEMBL:I1MB08;Derives_from=GSCOCT00033800001;Name=Cc10_g15950;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein VERNALIZATION INSENSITIVE 3,CC_functional_completeness:complete,CC_gene:VIN3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033800001~ Putative Protein VERNALIZATION INSENSITIVE 3~ VIN3~ complete;original_location=join(1757804..1757846%2C1759241..1759482%2C1759525..1759907%2C1760409..1760728%2C1760892..1761718);owner=coffea | |
| 52134 chr10 manual_curation exon 26902597 26902691 . + . Parent=GSCOCT00033800001 | |
| 52135 chr10 manual_curation exon 26902792 26902844 . + . Parent=GSCOCT00033800001 | |
| 52136 chr10 manual_curation exon 26904239 26904480 . + . Parent=GSCOCT00033800001 | |
| 52137 chr10 manual_curation exon 26904523 26904905 . + . Parent=GSCOCT00033800001 | |
| 52138 chr10 manual_curation exon 26905407 26905726 . + . Parent=GSCOCT00033800001 | |
| 52139 chr10 manual_curation exon 26905890 26906716 . + . Parent=GSCOCT00033800001 | |
| 52140 chr10 manual_curation CDS 26902802 26902844 . + 0 Parent=GSCOCT00033800001 | |
| 52141 chr10 manual_curation CDS 26904239 26904480 . + 1 Parent=GSCOCT00033800001 | |
| 52142 chr10 manual_curation CDS 26904523 26904905 . + 0 Parent=GSCOCT00033800001 | |
| 52143 chr10 manual_curation CDS 26905407 26905726 . + 2 Parent=GSCOCT00033800001 | |
| 52144 chr10 manual_curation CDS 26905890 26906716 . + 1 Parent=GSCOCT00033800001 | |
| 52145 chr10 manual_curation gene 26908253 26912108 . + . ID=GSCOCG00033801001;Name=Cc10_g15960 | |
| 52146 chr10 manual_curation mRNA 26908253 26912108 . + . ID=GSCOCT00033801001;Parent=GSCOCG00033801001;Name=Cc10_g15960 | |
| 52147 chr10 manual_curation polypeptide 26908423 26911736 . + . ID=GSCOCP00033801001;Dbxref=GENE3D:G3DSA:3.30.160.20,InterPro:IPR001159,InterPro:IPR014720,PFAM:PF00035,PROFILE:PS50137,SMART:SM00358,SwissProt:O04492,SwissProt:Q0IQN6,SwissProt:Q0IV63,TAIR:AT1G09700.1,TAIR:AT3G26932.1,TAIR:AT5G41070.1,TrEMBL:A5BNI8,TrEMBL:I1JV80,TrEMBL:I1K9R9;Derives_from=GSCOCT00033801001;Name=Cc10_g15960;Ontology_term=CC_evidence_code:ISS,GO:0003723,GO:0003725,GO:0005622,CC_EC_number:3.1.26.3,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:DRB1,CC_gene:DRB8,CC_gene:DRB7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033801001~ Putative uncharacterized protein~ DRB1~ fragment;original_location=join(1763425..1763449%2C1764306..1764568%2C1766064..1766738);owner=coffea | |
| 52148 chr10 manual_curation exon 26908253 26908447 . + . Parent=GSCOCT00033801001 | |
| 52149 chr10 manual_curation exon 26909304 26909566 . + . Parent=GSCOCT00033801001 | |
| 52150 chr10 manual_curation exon 26911062 26912108 . + . Parent=GSCOCT00033801001 | |
| 52151 chr10 manual_curation CDS 26908423 26908447 . + 0 Parent=GSCOCT00033801001 | |
| 52152 chr10 manual_curation CDS 26909304 26909566 . + 1 Parent=GSCOCT00033801001 | |
| 52153 chr10 manual_curation CDS 26911062 26911736 . + 0 Parent=GSCOCT00033801001 | |
| 52154 chr10 manual_curation gene 26913426 26917772 . + . ID=GSCOCG00033802001;Name=Cc10_g15970 | |
| 52155 chr10 manual_curation mRNA 26913426 26917772 . + . ID=GSCOCT00033802001;Parent=GSCOCG00033802001;Name=Cc10_g15970 | |
| 52156 chr10 manual_curation polypeptide 26913574 26917596 . + . ID=GSCOCP00033802001;Dbxref=GENE3D:G3DSA:1.25.40.120,InterPro:IPR002088,InterPro:IPR008940,PFAM:PF01239,PROFILE:PS51147,SwissProt:A5A779,SwissProt:Q5NVK5,SwissProt:Q92696,TAIR:AT3G59380.1,TAIR:AT4G24490.1,TAIR:AT5G41820.1,TrEMBL:B9RJY7,TrEMBL:F6H143,TrEMBL:I1K9S0;Derives_from=GSCOCT00033802001;Name=Cc10_g15970;Ontology_term=CC_evidence_code:ISS,GO:0008318,GO:0018346,CC_EC_number:2.5.1.60,PRODUCT:RAB geranylgeranyl transferase alpha subunit 1,CC_functional_completeness:complete,CC_gene:RABGGTA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033802001~ RAB geranylgeranyl transferase alpha subunit 1~ RABGGTA~ complete;original_location=join(1768576..1768691%2C1768825..1768987%2C1769414..1769574%2C1769662..1769766%2C1770494..1771270%2C1771362..1771554%2C1771803..1771986%2C1772216..1772598);owner=coffea | |
| 52157 chr10 manual_curation exon 26913426 26913689 . + . Parent=GSCOCT00033802001 | |
| 52158 chr10 manual_curation exon 26913823 26913985 . + . Parent=GSCOCT00033802001 | |
| 52159 chr10 manual_curation exon 26914412 26914572 . + . Parent=GSCOCT00033802001 | |
| 52160 chr10 manual_curation exon 26914660 26914764 . + . Parent=GSCOCT00033802001 | |
| 52161 chr10 manual_curation exon 26915492 26916268 . + . Parent=GSCOCT00033802001 | |
| 52162 chr10 manual_curation exon 26916360 26916552 . + . Parent=GSCOCT00033802001 | |
| 52163 chr10 manual_curation exon 26916801 26916984 . + . Parent=GSCOCT00033802001 | |
| 52164 chr10 manual_curation exon 26917214 26917772 . + . Parent=GSCOCT00033802001 | |
| 52165 chr10 manual_curation CDS 26913574 26913689 . + 0 Parent=GSCOCT00033802001 | |
| 52166 chr10 manual_curation CDS 26913823 26913985 . + 2 Parent=GSCOCT00033802001 | |
| 52167 chr10 manual_curation CDS 26914412 26914572 . + 0 Parent=GSCOCT00033802001 | |
| 52168 chr10 manual_curation CDS 26914660 26914764 . + 2 Parent=GSCOCT00033802001 | |
| 52169 chr10 manual_curation CDS 26915492 26916268 . + 2 Parent=GSCOCT00033802001 | |
| 52170 chr10 manual_curation CDS 26916360 26916552 . + 2 Parent=GSCOCT00033802001 | |
| 52171 chr10 manual_curation CDS 26916801 26916984 . + 0 Parent=GSCOCT00033802001 | |
| 52172 chr10 manual_curation CDS 26917214 26917596 . + 1 Parent=GSCOCT00033802001 | |
| 52173 chr10 manual_curation gene 26974329 26977715 . + . ID=GSCOCG00033803001;Name=Cc10_g15980 | |
| 52174 chr10 manual_curation mRNA 26974329 26977715 . + . ID=GSCOCT00033803001;Parent=GSCOCG00033803001;Name=Cc10_g15980 | |
| 52175 chr10 manual_curation polypeptide 26974436 26976951 . + . ID=GSCOCP00033803001;Dbxref=GENE3D:G3DSA:1.50.10.10,InterPro:IPR001701,InterPro:IPR008928,InterPro:IPR012341,InterPro:IPR018221,PANTHER:PTHR22298:SF3,PFAM:PF00759,PROSITE:PS00698,SUPERFAMILY:SSF48208,SwissProt:Q2V4L8,SwissProt:Q7XTH4,SwissProt:Q9C9H5,TAIR:AT1G22880.1,TAIR:AT1G71380.1,TAIR:AT4G02290.1,TrEMBL:D7SN09,TrEMBL:O22298,TrEMBL:Q6V596;Derives_from=GSCOCT00033803001;Name=Cc10_g15980;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,CC_EC_number:3.2.1.4,PRODUCT:Endoglucanase 9,CC_functional_completeness:complete,CC_gene:CEL3,CC_gene:CEL5,CC_gene:GLU4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033803001~ Endoglucanase 9~ CEL3~ complete;original_location=join(1829438..1829653%2C1830380..1830883%2C1830991..1831140%2C1831254..1831365%2C1831457..1831953);owner=coffea | |
| 52176 chr10 manual_curation exon 26974329 26974651 . + . Parent=GSCOCT00033803001 | |
| 52177 chr10 manual_curation exon 26975378 26975881 . + . Parent=GSCOCT00033803001 | |
| 52178 chr10 manual_curation exon 26975989 26976138 . + . Parent=GSCOCT00033803001 | |
| 52179 chr10 manual_curation exon 26976252 26976363 . + . Parent=GSCOCT00033803001 | |
| 52180 chr10 manual_curation exon 26976455 26977715 . + . Parent=GSCOCT00033803001 | |
| 52181 chr10 manual_curation CDS 26974436 26974651 . + 0 Parent=GSCOCT00033803001 | |
| 52182 chr10 manual_curation CDS 26975378 26975881 . + 0 Parent=GSCOCT00033803001 | |
| 52183 chr10 manual_curation CDS 26975989 26976138 . + 0 Parent=GSCOCT00033803001 | |
| 52184 chr10 manual_curation CDS 26976252 26976363 . + 0 Parent=GSCOCT00033803001 | |
| 52185 chr10 manual_curation CDS 26976455 26976951 . + 1 Parent=GSCOCT00033803001 | |
| 52186 chr10 manual_curation gene 26977907 26981925 . - . ID=GSCOCG00033804001;Name=Cc10_g15990 | |
| 52187 chr10 manual_curation mRNA 26977907 26981925 . - . ID=GSCOCT00033804001;Parent=GSCOCG00033804001;Name=Cc10_g15990 | |
| 52188 chr10 manual_curation polypeptide 26977907 26981925 . - . ID=GSCOCP00033804001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019775,InterPro:IPR019781,InterPro:IPR019782,PFAM:PF00400,PROFILE:PS50082,PROFILE:PS50294,PROSITE:PS00678,SMART:SM00320,SUPERFAMILY:SSF50978,SwissProt:Q1HPW4,SwissProt:Q38884,SwissProt:Q7ZV55,TAIR:AT1G52730.2,TAIR:AT2G46280.1,TAIR:AT2G46290.1,TrEMBL:B9S7C0,TrEMBL:I1J582,TrEMBL:Q94KS2;Derives_from=GSCOCT00033804001;Name=Cc10_g15990;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Eukaryotic translation initiation factor 3 subunit I,CC_functional_completeness:fragment,CC_gene:TIF3I1,CC_gene:eif3i;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033804001~ Eukaryotic translation initiation factor 3 subunit I~ TIF3I1~ fragment;original_location=complement(join(1836873..1836927%2C1836017..1836144%2C1835682..1835801%2C1835451..1835540%2C1833496..1833582%2C1833304..1833383%2C1832909..1832984));owner=coffea | |
| 52189 chr10 manual_curation exon 26977907 26977982 . - . Parent=GSCOCT00033804001 | |
| 52190 chr10 manual_curation exon 26978302 26978381 . - . Parent=GSCOCT00033804001 | |
| 52191 chr10 manual_curation exon 26978494 26978580 . - . Parent=GSCOCT00033804001 | |
| 52192 chr10 manual_curation exon 26980449 26980538 . - . Parent=GSCOCT00033804001 | |
| 52193 chr10 manual_curation exon 26980680 26980799 . - . Parent=GSCOCT00033804001 | |
| 52194 chr10 manual_curation exon 26981015 26981142 . - . Parent=GSCOCT00033804001 | |
| 52195 chr10 manual_curation exon 26981871 26981925 . - . Parent=GSCOCT00033804001 | |
| 52196 chr10 manual_curation CDS 26977907 26977982 . - 2 Parent=GSCOCT00033804001 | |
| 52197 chr10 manual_curation CDS 26978302 26978381 . - 0 Parent=GSCOCT00033804001 | |
| 52198 chr10 manual_curation CDS 26978494 26978580 . - 0 Parent=GSCOCT00033804001 | |
| 52199 chr10 manual_curation CDS 26980449 26980538 . - 0 Parent=GSCOCT00033804001 | |
| 52200 chr10 manual_curation CDS 26980680 26980799 . - 0 Parent=GSCOCT00033804001 | |
| 52201 chr10 manual_curation CDS 26981015 26981142 . - 1 Parent=GSCOCT00033804001 | |
| 52202 chr10 manual_curation CDS 26981871 26981925 . - 0 Parent=GSCOCT00033804001 | |
| 52203 chr10 manual_curation gene 26985025 26986049 . + . ID=GSCOCG00033806001;Name=Cc10_g16000 | |
| 52204 chr10 manual_curation mRNA 26985025 26986049 . + . ID=GSCOCT00033806001;Parent=GSCOCG00033806001;Name=Cc10_g16000 | |
| 52205 chr10 manual_curation polypeptide 26985048 26986049 . + . ID=GSCOCP00033806001;Dbxref=InterPro:IPR013094,PFAM:PF07859,SwissProt:Q940G6,SwissProt:Q9LT10,SwissProt:Q9LYC1,TAIR:AT3G63010.1,TAIR:AT5G23530.1,TAIR:AT5G27320.1,TrEMBL:A5ATP1,TrEMBL:F6GW13,TrEMBL:F6GW15;Derives_from=GSCOCT00033806001;Name=Cc10_g16000;Ontology_term=CC_evidence_code:ISS,GO:0008152,GO:0016787,CC_EC_number:missing_EC_number,PRODUCT:Putative carboxyesterase 18,CC_functional_completeness:complete,CC_gene:CXE18,CC_gene:GID1B,CC_gene:GID1C;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033806001~ Putative carboxyesterase 18~ CXE18~ complete;original_location=join(1840050..1840329%2C1840441..1840455%2C1840558..1841051);owner=coffea | |
| 52206 chr10 manual_curation exon 26985025 26985327 . + . Parent=GSCOCT00033806001 | |
| 52207 chr10 manual_curation exon 26985439 26985453 . + . Parent=GSCOCT00033806001 | |
| 52208 chr10 manual_curation exon 26985556 26986049 . + . Parent=GSCOCT00033806001 | |
| 52209 chr10 manual_curation CDS 26985048 26985327 . + 0 Parent=GSCOCT00033806001 | |
| 52210 chr10 manual_curation CDS 26985439 26985453 . + 1 Parent=GSCOCT00033806001 | |
| 52211 chr10 manual_curation CDS 26985556 26986049 . + 1 Parent=GSCOCT00033806001 | |
| 52212 chr10 manual_curation gene 26988407 26990404 . - . ID=GSCOCG00033807001;Name=Cc10_g16010 | |
| 52213 chr10 manual_curation mRNA 26988407 26990404 . - . ID=GSCOCT00033807001;Parent=GSCOCG00033807001;Name=Cc10_g16010 | |
| 52214 chr10 manual_curation polypeptide 26988407 26990404 . - . ID=GSCOCP00033807001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q56XI1,SwissProt:Q9FXB9,SwissProt:Q9SY02,TAIR:AT1G09410.1,TAIR:AT1G56690.1,TAIR:AT4G02750.1,TIGRFAMs:TIGR00756,TrEMBL:B9IHD3,TrEMBL:F6HS87,TrEMBL:G7JYR9;Derives_from=GSCOCT00033807001;Name=Cc10_g16010;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Pentatricopeptide repeat-containing protein At4g02750,CC_functional_completeness:complete,CC_gene:PCMP-H24,CC_gene:PCMP-H18,CC_gene:PCMP-H69;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033807001~ Putative Pentatricopeptide repeat-containing protein At4g02750~ PCMP-H24~ complete;original_location=complement(1843409..1845406);owner=coffea | |
| 52215 chr10 manual_curation exon 26988407 26990404 . - . Parent=GSCOCT00033807001 | |
| 52216 chr10 manual_curation CDS 26988407 26990404 . - 0 Parent=GSCOCT00033807001 | |
| 52217 chr10 manual_curation gene 26994032 26996791 . - . ID=GSCOCG00033809001;Name=Cc10_g16020 | |
| 52218 chr10 manual_curation mRNA 26994032 26996791 . - . ID=GSCOCT00033809001;Parent=GSCOCG00033809001;Name=Cc10_g16020 | |
| 52219 chr10 manual_curation polypeptide 26994032 26996704 . - . ID=GSCOCP00033809001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR012677,PFAM:PF00076,PROFILE:PS50102,SMART:SM00360,SwissProt:Q09442,SwissProt:Q15427,SwissProt:Q6AYL5,TAIR:AT2G18510.1,TAIR:AT4G10110.1,TrEMBL:D7SN08,TrEMBL:I1LD53,TrEMBL:Q2I310;Derives_from=GSCOCT00033809001;Name=Cc10_g16020;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,CC_EC_number:missing_EC_number,PRODUCT:RNA-binding (RRM/RBD/RNP motifs) family protein,CC_functional_completeness:complete,CC_gene:sap-49,CC_gene:SF3B4,CC_gene:Sf3b4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033809001~ RNA-binding (RRM/RBD/RNP motifs) family protein~ sap-49~ complete;original_location=complement(join(1851670..1851706%2C1850820..1851031%2C1849358..1849520%2C1849034..1849254));owner=coffea | |
| 52220 chr10 manual_curation exon 26994032 26994252 . - . Parent=GSCOCT00033809001 | |
| 52221 chr10 manual_curation exon 26994356 26994518 . - . Parent=GSCOCT00033809001 | |
| 52222 chr10 manual_curation exon 26995818 26996029 . - . Parent=GSCOCT00033809001 | |
| 52223 chr10 manual_curation exon 26996668 26996791 . - . Parent=GSCOCT00033809001 | |
| 52224 chr10 manual_curation CDS 26994032 26994252 . - 1 Parent=GSCOCT00033809001 | |
| 52225 chr10 manual_curation CDS 26994356 26994518 . - 0 Parent=GSCOCT00033809001 | |
| 52226 chr10 manual_curation CDS 26995818 26996029 . - 1 Parent=GSCOCT00033809001 | |
| 52227 chr10 manual_curation CDS 26996668 26996704 . - 0 Parent=GSCOCT00033809001 | |
| 52228 chr10 manual_curation gene 27008911 27013596 . + . ID=GSCOCG00033812001;Name=Cc10_g16030 | |
| 52229 chr10 manual_curation mRNA 27008911 27013596 . + . ID=GSCOCT00033812001;Parent=GSCOCG00033812001;Name=Cc10_g16030 | |
| 52230 chr10 manual_curation polypeptide 27010450 27013509 . + . ID=GSCOCP00033812001;Dbxref=InterPro:IPR008979,InterPro:IPR012919,PFAM:PF07738,SUPERFAMILY:SSF49785,SwissProt:O59729,SwissProt:Q12232,SwissProt:Q54MI3,TAIR:AT1G22882.1,TAIR:AT1G71360.1,TAIR:AT4G23950.2,TrEMBL:B9N1M8,TrEMBL:F6GW16,TrEMBL:I1KFX6;Derives_from=GSCOCT00033812001;Name=Cc10_g16030;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Galactose-binding protein,CC_functional_completeness:complete,CC_gene:slp1,CC_gene:sun2,CC_gene:SLP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033812001~ Putative Galactose-binding protein~ slp1~ complete;original_location=join(1865452..1865629%2C1866413..1867701%2C1867792..1867952%2C1868088..1868198%2C1868283..1868511);owner=coffea | |
| 52231 chr10 manual_curation exon 27008911 27009269 . + . Parent=GSCOCT00033812001 | |
| 52232 chr10 manual_curation exon 27010262 27010314 . + . Parent=GSCOCT00033812001 | |
| 52233 chr10 manual_curation exon 27010393 27010627 . + . Parent=GSCOCT00033812001 | |
| 52234 chr10 manual_curation exon 27011411 27012699 . + . Parent=GSCOCT00033812001 | |
| 52235 chr10 manual_curation exon 27012790 27012950 . + . Parent=GSCOCT00033812001 | |
| 52236 chr10 manual_curation exon 27013086 27013196 . + . Parent=GSCOCT00033812001 | |
| 52237 chr10 manual_curation exon 27013281 27013596 . + . Parent=GSCOCT00033812001 | |
| 52238 chr10 manual_curation CDS 27010450 27010627 . + 0 Parent=GSCOCT00033812001 | |
| 52239 chr10 manual_curation CDS 27011411 27012699 . + 1 Parent=GSCOCT00033812001 | |
| 52240 chr10 manual_curation CDS 27012790 27012950 . + 0 Parent=GSCOCT00033812001 | |
| 52241 chr10 manual_curation CDS 27013086 27013196 . + 2 Parent=GSCOCT00033812001 | |
| 52242 chr10 manual_curation CDS 27013281 27013509 . + 2 Parent=GSCOCT00033812001 | |
| 52243 chr10 manual_curation gene 27017509 27019615 . + . ID=GSCOCG00033814001;Name=Cc10_g16040 | |
| 52244 chr10 manual_curation mRNA 27017509 27019615 . + . ID=GSCOCT00033814001;Parent=GSCOCG00033814001;Name=Cc10_g16040 | |
| 52245 chr10 manual_curation polypeptide 27017852 27019615 . + . ID=GSCOCP00033814001;Dbxref=InterPro:IPR006094,InterPro:IPR012951,InterPro:IPR016166,PFAM:PF01565,PFAM:PF08031,PROFILE:PS51387,SUPERFAMILY:SSF56176,SwissProt:P30986,SwissProt:P93479,SwissProt:Q9SVG4,TAIR:AT2G34790.1,TAIR:AT5G44390.1,TAIR:AT5G44400.1,TrEMBL:B9T6Q5,TrEMBL:F1T162,TrEMBL:I1NID0;Derives_from=GSCOCT00033814001;Name=Cc10_g16040;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0016491,GO:0050660,CC_EC_number:1.21.3.3,PRODUCT:Putative Reticuline oxidase,CC_functional_completeness:complete,CC_gene:BBE1,CC_gene:At4g20830;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033814001~ Putative Reticuline oxidase~ BBE1~ complete;original_location=1872854..1874617;owner=coffea | |
| 52246 chr10 manual_curation exon 27017509 27019615 . + . Parent=GSCOCT00033814001 | |
| 52247 chr10 manual_curation CDS 27017852 27019615 . + 0 Parent=GSCOCT00033814001 | |
| 52248 chr10 manual_curation gene 27020422 27028425 . + . ID=GSCOCG00033815001;Name=Cc10_g16050 | |
| 52249 chr10 manual_curation mRNA 27020422 27028425 . + . ID=GSCOCT00033815001;Parent=GSCOCG00033815001;Name=Cc10_g16050 | |
| 52250 chr10 manual_curation polypeptide 27020665 27028049 . + . ID=GSCOCP00033815001;Dbxref=InterPro:IPR001950,InterPro:IPR002478,InterPro:IPR003121,InterPro:IPR004521,InterPro:IPR015947,PFAM:PF01253,PFAM:PF01472,PROFILE:PS50296,PROFILE:PS50890,SUPERFAMILY:SSF47592,SUPERFAMILY:SSF55159,SUPERFAMILY:SSF88697,SwissProt:P0CL18,SwissProt:Q5PPG7,SwissProt:Q61211,TAIR:AT1G09150.1,TAIR:AT1G71350.1,TIGRFAMs:TIGR00451,TrEMBL:B9I810,TrEMBL:B9SBV7,TrEMBL:D7SN00;Derives_from=GSCOCT00033815001;Name=Cc10_g16050;Ontology_term=CC_evidence_code:ISS,GO:0003723,GO:0003743,GO:0006413,CC_EC_number:missing_EC_number,PRODUCT:Putative Eukaryotic translation initiation factor 2D,CC_functional_completeness:complete,CC_gene:Eif2d,CC_gene:EIF2D;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033815001~ Putative Eukaryotic translation initiation factor 2D~ Eif2d~ complete;original_location=join(1875667..1875801%2C1877996..1878107%2C1878947..1879137%2C1879232..1879326%2C1879398..1879820%2C1880588..1880696%2C1881577..1882225%2C1882930..1883051);owner=coffea | |
| 52251 chr10 manual_curation exon 27020422 27020799 . + . Parent=GSCOCT00033815001 | |
| 52252 chr10 manual_curation exon 27022994 27023105 . + . Parent=GSCOCT00033815001 | |
| 52253 chr10 manual_curation exon 27023945 27024135 . + . Parent=GSCOCT00033815001 | |
| 52254 chr10 manual_curation exon 27024230 27024324 . + . Parent=GSCOCT00033815001 | |
| 52255 chr10 manual_curation exon 27024396 27024818 . + . Parent=GSCOCT00033815001 | |
| 52256 chr10 manual_curation exon 27025586 27025694 . + . Parent=GSCOCT00033815001 | |
| 52257 chr10 manual_curation exon 27026575 27027223 . + . Parent=GSCOCT00033815001 | |
| 52258 chr10 manual_curation exon 27027928 27028425 . + . Parent=GSCOCT00033815001 | |
| 52259 chr10 manual_curation CDS 27020665 27020799 . + 0 Parent=GSCOCT00033815001 | |
| 52260 chr10 manual_curation CDS 27022994 27023105 . + 0 Parent=GSCOCT00033815001 | |
| 52261 chr10 manual_curation CDS 27023945 27024135 . + 1 Parent=GSCOCT00033815001 | |
| 52262 chr10 manual_curation CDS 27024230 27024324 . + 0 Parent=GSCOCT00033815001 | |
| 52263 chr10 manual_curation CDS 27024396 27024818 . + 2 Parent=GSCOCT00033815001 | |
| 52264 chr10 manual_curation CDS 27025586 27025694 . + 2 Parent=GSCOCT00033815001 | |
| 52265 chr10 manual_curation CDS 27026575 27027223 . + 0 Parent=GSCOCT00033815001 | |
| 52266 chr10 manual_curation CDS 27027928 27028049 . + 1 Parent=GSCOCT00033815001 | |
| 52267 chr10 manual_curation gene 27030140 27037461 . + . ID=GSCOCG00033816001;Name=Cc10_g16060 | |
| 52268 chr10 manual_curation mRNA 27030140 27037461 . + . ID=GSCOCT00033816001;Parent=GSCOCG00033816001;Name=Cc10_g16060 | |
| 52269 chr10 manual_curation polypeptide 27030412 27036834 . + . ID=GSCOCP00033816001;Dbxref=InterPro:IPR000368,InterPro:IPR001296,InterPro:IPR006380,InterPro:IPR012819,PFAM:PF00534,PFAM:PF00862,PFAM:PF05116,SwissProt:F4JLK2,SwissProt:O04933,SwissProt:Q8RY24,TAIR:AT1G04920.1,TAIR:AT4G10120.1,TAIR:AT5G20280.1,TIGRFAMs:TIGR02468,TrEMBL:F6GW11,TrEMBL:Q3HLN3,TrEMBL:Q5EEP9;Derives_from=GSCOCT00033816001;Name=Cc10_g16060;Ontology_term=CC_evidence_code:ISS,GO:0005985,GO:0009058,GO:0046524,CC_EC_number:2.4.1.14,PRODUCT:Probable sucrose-phosphate synthase 4,CC_functional_completeness:complete,CC_gene:SPS4,CC_gene:SPS3,CC_gene:SPS2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033816001~ Probable sucrose-phosphate synthase 4~ SPS4~ complete;original_location=join(1885414..1885689%2C1886098..1886187%2C1886730..1886950%2C1887169..1887232%2C1887508..1887707%2C1887905..1888385%2C1888920..1889048%2C1889231..1889362%2C1889458..1889634%2C1889931..1889984%2C1890094..1890156%2C1890398..1891234%2C1891326..1891453%2C1891569..1891836);owner=coffea | |
| 52270 chr10 manual_curation exon 27030140 27030687 . + . Parent=GSCOCT00033816001 | |
| 52271 chr10 manual_curation exon 27031096 27031185 . + . Parent=GSCOCT00033816001 | |
| 52272 chr10 manual_curation exon 27031728 27031948 . + . Parent=GSCOCT00033816001 | |
| 52273 chr10 manual_curation exon 27032167 27032230 . + . Parent=GSCOCT00033816001 | |
| 52274 chr10 manual_curation exon 27032506 27032705 . + . Parent=GSCOCT00033816001 | |
| 52275 chr10 manual_curation exon 27032903 27033383 . + . Parent=GSCOCT00033816001 | |
| 52276 chr10 manual_curation exon 27033918 27034046 . + . Parent=GSCOCT00033816001 | |
| 52277 chr10 manual_curation exon 27034229 27034360 . + . Parent=GSCOCT00033816001 | |
| 52278 chr10 manual_curation exon 27034456 27034632 . + . Parent=GSCOCT00033816001 | |
| 52279 chr10 manual_curation exon 27034929 27034982 . + . Parent=GSCOCT00033816001 | |
| 52280 chr10 manual_curation exon 27035092 27035154 . + . Parent=GSCOCT00033816001 | |
| 52281 chr10 manual_curation exon 27035396 27036232 . + . Parent=GSCOCT00033816001 | |
| 52282 chr10 manual_curation exon 27036324 27036451 . + . Parent=GSCOCT00033816001 | |
| 52283 chr10 manual_curation exon 27036567 27037461 . + . Parent=GSCOCT00033816001 | |
| 52284 chr10 manual_curation CDS 27030412 27030687 . + 0 Parent=GSCOCT00033816001 | |
| 52285 chr10 manual_curation CDS 27031096 27031185 . + 0 Parent=GSCOCT00033816001 | |
| 52286 chr10 manual_curation CDS 27031728 27031948 . + 0 Parent=GSCOCT00033816001 | |
| 52287 chr10 manual_curation CDS 27032167 27032230 . + 2 Parent=GSCOCT00033816001 | |
| 52288 chr10 manual_curation CDS 27032506 27032705 . + 0 Parent=GSCOCT00033816001 | |
| 52289 chr10 manual_curation CDS 27032903 27033383 . + 2 Parent=GSCOCT00033816001 | |
| 52290 chr10 manual_curation CDS 27033918 27034046 . + 0 Parent=GSCOCT00033816001 | |
| 52291 chr10 manual_curation CDS 27034229 27034360 . + 0 Parent=GSCOCT00033816001 | |
| 52292 chr10 manual_curation CDS 27034456 27034632 . + 0 Parent=GSCOCT00033816001 | |
| 52293 chr10 manual_curation CDS 27034929 27034982 . + 0 Parent=GSCOCT00033816001 | |
| 52294 chr10 manual_curation CDS 27035092 27035154 . + 0 Parent=GSCOCT00033816001 | |
| 52295 chr10 manual_curation CDS 27035396 27036232 . + 0 Parent=GSCOCT00033816001 | |
| 52296 chr10 manual_curation CDS 27036324 27036451 . + 0 Parent=GSCOCT00033816001 | |
| 52297 chr10 manual_curation CDS 27036567 27036834 . + 2 Parent=GSCOCT00033816001 | |
| 52298 chr10 manual_curation gene 27039857 27045707 . - . ID=GSCOCG00033817001;Name=Cc10_g16070 | |
| 52299 chr10 manual_curation mRNA 27039857 27045707 . - . ID=GSCOCT00033817001;Parent=GSCOCG00033817001;Name=Cc10_g16070 | |
| 52300 chr10 manual_curation polypeptide 27039857 27045399 . - . ID=GSCOCP00033817001;Dbxref=TAIR:AT1G33500.1,TrEMBL:B9I868,TrEMBL:B9S6X6,TrEMBL:D7KJ77;Derives_from=GSCOCT00033817001;Name=Cc10_g16070;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B Has 30201 Blast hits to 17322 proteins in 780 species,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033817001~ Putative unknown protein%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ unknown_gene~ fragment;original_location=complement(join(1900353..1900401%2C1900059..1900145%2C1898688..1898821%2C1897151..1897209%2C1896963..1897017%2C1896828..1896878%2C1895659..1895698%2C1894859..1894998));owner=coffea | |
| 52301 chr10 manual_curation exon 27045557 27045707 . - . Parent=GSCOCT00033817001 | |
| 52302 chr10 manual_curation exon 27039857 27039996 . - . Parent=GSCOCT00033817001 | |
| 52303 chr10 manual_curation exon 27040657 27040696 . - . Parent=GSCOCT00033817001 | |
| 52304 chr10 manual_curation exon 27041826 27041876 . - . Parent=GSCOCT00033817001 | |
| 52305 chr10 manual_curation exon 27041961 27042015 . - . Parent=GSCOCT00033817001 | |
| 52306 chr10 manual_curation exon 27042149 27042207 . - . Parent=GSCOCT00033817001 | |
| 52307 chr10 manual_curation exon 27043686 27043819 . - . Parent=GSCOCT00033817001 | |
| 52308 chr10 manual_curation exon 27045057 27045143 . - . Parent=GSCOCT00033817001 | |
| 52309 chr10 manual_curation exon 27045351 27045410 . - . Parent=GSCOCT00033817001 | |
| 52310 chr10 manual_curation CDS 27039857 27039996 . - 1 Parent=GSCOCT00033817001 | |
| 52311 chr10 manual_curation CDS 27040657 27040696 . - 0 Parent=GSCOCT00033817001 | |
| 52312 chr10 manual_curation CDS 27041826 27041876 . - 0 Parent=GSCOCT00033817001 | |
| 52313 chr10 manual_curation CDS 27041961 27042015 . - 2 Parent=GSCOCT00033817001 | |
| 52314 chr10 manual_curation CDS 27042149 27042207 . - 0 Parent=GSCOCT00033817001 | |
| 52315 chr10 manual_curation CDS 27043686 27043819 . - 1 Parent=GSCOCT00033817001 | |
| 52316 chr10 manual_curation CDS 27045057 27045143 . - 1 Parent=GSCOCT00033817001 | |
| 52317 chr10 manual_curation CDS 27045351 27045399 . - 0 Parent=GSCOCT00033817001 | |
| 52318 chr10 manual_curation gene 27048745 27057283 . + . ID=GSCOCG00033819001;Name=Cc10_g16080 | |
| 52319 chr10 manual_curation mRNA 27048745 27057283 . + . ID=GSCOCT00033819001;Parent=GSCOCG00033819001;Name=Cc10_g16080 | |
| 52320 chr10 manual_curation polypeptide 27048932 27056198 . + . ID=GSCOCP00033819001;Dbxref=GENE3D:G3DSA:3.20.20.190,InterPro:IPR004129,InterPro:IPR017946,PANTHER:PTHR23344,PFAM:PF03009,SUPERFAMILY:SSF51695,TAIR:AT1G71340.1,TrEMBL:B9S6X7,TrEMBL:D7SMX5,TrEMBL:I1KFY0;Derives_from=GSCOCT00033819001;Name=Cc10_g16080;Ontology_term=CC_evidence_code:ISS,GO:0006071,GO:0006629,GO:0008081,GO:0008889,CC_EC_number:missing_EC_number,CC_EC_number:missing_EC_number,PRODUCT:PLC-like phosphodiesterases superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033819001~ PLC-like phosphodiesterases superfamily protein~ unknown_gene~ complete;original_location=join(1903934..1904146%2C1906505..1906591%2C1907193..1907290%2C1908506..1908566%2C1909033..1909113%2C1909364..1909456%2C1909934..1910023%2C1910675..1910802%2C1911032..1911200);owner=coffea | |
| 52321 chr10 manual_curation exon 27048745 27049144 . + . Parent=GSCOCT00033819001 | |
| 52322 chr10 manual_curation exon 27051503 27051589 . + . Parent=GSCOCT00033819001 | |
| 52323 chr10 manual_curation exon 27052191 27052288 . + . Parent=GSCOCT00033819001 | |
| 52324 chr10 manual_curation exon 27053504 27053564 . + . Parent=GSCOCT00033819001 | |
| 52325 chr10 manual_curation exon 27054031 27054111 . + . Parent=GSCOCT00033819001 | |
| 52326 chr10 manual_curation exon 27054362 27054454 . + . Parent=GSCOCT00033819001 | |
| 52327 chr10 manual_curation exon 27054932 27055021 . + . Parent=GSCOCT00033819001 | |
| 52328 chr10 manual_curation exon 27055673 27055800 . + . Parent=GSCOCT00033819001 | |
| 52329 chr10 manual_curation exon 27056030 27057283 . + . Parent=GSCOCT00033819001 | |
| 52330 chr10 manual_curation CDS 27048932 27049144 . + 0 Parent=GSCOCT00033819001 | |
| 52331 chr10 manual_curation CDS 27051503 27051589 . + 0 Parent=GSCOCT00033819001 | |
| 52332 chr10 manual_curation CDS 27052191 27052288 . + 0 Parent=GSCOCT00033819001 | |
| 52333 chr10 manual_curation CDS 27053504 27053564 . + 2 Parent=GSCOCT00033819001 | |
| 52334 chr10 manual_curation CDS 27054031 27054111 . + 0 Parent=GSCOCT00033819001 | |
| 52335 chr10 manual_curation CDS 27054362 27054454 . + 0 Parent=GSCOCT00033819001 | |
| 52336 chr10 manual_curation CDS 27054932 27055021 . + 0 Parent=GSCOCT00033819001 | |
| 52337 chr10 manual_curation CDS 27055673 27055800 . + 0 Parent=GSCOCT00033819001 | |
| 52338 chr10 manual_curation CDS 27056030 27056198 . + 2 Parent=GSCOCT00033819001 | |
| 52339 chr10 manual_curation gene 27057347 27061728 . + . ID=GSCOCG00033820001;Name=Cc10_g16090 | |
| 52340 chr10 manual_curation mRNA 27057347 27061728 . + . ID=GSCOCT00033820001;Parent=GSCOCG00033820001;Name=Cc10_g16090 | |
| 52341 chr10 manual_curation polypeptide 27057347 27061440 . + . ID=GSCOCP00033820001;Dbxref=InterPro:IPR018639,PFAM:PF09835,TAIR:AT1G33490.1,TAIR:AT4G10140.1,TrEMBL:C6SVR3,TrEMBL:D7SMX6,TrEMBL:I1JVK4;Derives_from=GSCOCT00033820001;Name=Cc10_g16090;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033820001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: N-terminal protein myristoylation%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2062 (InterPro:IPR018639)%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G33490.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(1912349..1912452%2C1912698..1912768%2C1913451..1913556%2C1914677..1914809%2C1916278..1916442);owner=coffea | |
| 52342 chr10 manual_curation exon 27057347 27057450 . + . Parent=GSCOCT00033820001 | |
| 52343 chr10 manual_curation exon 27057696 27057766 . + . Parent=GSCOCT00033820001 | |
| 52344 chr10 manual_curation exon 27058449 27058554 . + . Parent=GSCOCT00033820001 | |
| 52345 chr10 manual_curation exon 27059675 27059807 . + . Parent=GSCOCT00033820001 | |
| 52346 chr10 manual_curation exon 27061276 27061728 . + . Parent=GSCOCT00033820001 | |
| 52347 chr10 manual_curation CDS 27057347 27057450 . + 0 Parent=GSCOCT00033820001 | |
| 52348 chr10 manual_curation CDS 27057696 27057766 . + 2 Parent=GSCOCT00033820001 | |
| 52349 chr10 manual_curation CDS 27058449 27058554 . + 1 Parent=GSCOCT00033820001 | |
| 52350 chr10 manual_curation CDS 27059675 27059807 . + 2 Parent=GSCOCT00033820001 | |
| 52351 chr10 manual_curation CDS 27061276 27061440 . + 0 Parent=GSCOCT00033820001 | |
| 52352 chr10 manual_curation gene 27077699 27081423 . + . ID=GSCOCG00033822001;Name=Cc10_g16100 | |
| 52353 chr10 manual_curation mRNA 27077699 27081423 . + . ID=GSCOCT00033822001;Parent=GSCOCG00033822001;Name=Cc10_g16100 | |
| 52354 chr10 manual_curation polypeptide 27078063 27080801 . + . ID=GSCOCP00033822001;Dbxref=InterPro:IPR001841,InterPro:IPR018957,PFAM:PF00097,PROFILE:PS50089,SMART:SM00184,SwissProt:Q570X5,SwissProt:Q9SN27,SwissProt:Q9SN28,TAIR:AT1G33480.1,TAIR:AT4G10150.1,TAIR:AT4G10160.1,TrEMBL:B9S6Y0,TrEMBL:D7LY22,TrEMBL:G7JKP9;Derives_from=GSCOCT00033822001;Name=Cc10_g16100;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative RING-H2 finger protein ATL7,CC_functional_completeness:complete,CC_gene:ATL7,CC_gene:ATL58,CC_gene:ATL59;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033822001~ Putative RING-H2 finger protein ATL7~ ATL7~ complete;original_location=join(1933065..1933382%2C1933564..1933649%2C1935413..1935803);owner=coffea | |
| 52355 chr10 manual_curation exon 27077699 27078380 . + . Parent=GSCOCT00033822001 | |
| 52356 chr10 manual_curation exon 27078562 27078647 . + . Parent=GSCOCT00033822001 | |
| 52357 chr10 manual_curation exon 27080411 27081423 . + . Parent=GSCOCT00033822001 | |
| 52358 chr10 manual_curation CDS 27078063 27078380 . + 0 Parent=GSCOCT00033822001 | |
| 52359 chr10 manual_curation CDS 27078562 27078647 . + 0 Parent=GSCOCT00033822001 | |
| 52360 chr10 manual_curation CDS 27080411 27080801 . + 2 Parent=GSCOCT00033822001 | |
| 52361 chr10 manual_curation gene 27081753 27083676 . + . ID=GSCOCG00033823001;Name=Cc10_g16110 | |
| 52362 chr10 manual_curation mRNA 27081753 27083676 . + . ID=GSCOCT00033823001;Parent=GSCOCG00033823001;Name=Cc10_g16110 | |
| 52363 chr10 manual_curation polypeptide 27082421 27083266 . + . ID=GSCOCP00033823001;Dbxref=InterPro:IPR011012,SUPERFAMILY:SSF64356,SwissProt:Q84WF5,TAIR:AT1G33475.1,TAIR:AT4G10170.1,TAIR:AT4G27840.1,TrEMBL:B9I873,TrEMBL:G7IVD5,TrEMBL:I1KFW6;Derives_from=GSCOCT00033823001;Name=Cc10_g16110;Ontology_term=CC_evidence_code:ISS,GO:0006810,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable VAMP-like protein At1g33475,CC_functional_completeness:complete,CC_gene:At1g33475;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033823001~ Putative Probable VAMP-like protein At1g33475~ At1g33475~ complete;original_location=1937423..1938268;owner=coffea | |
| 52364 chr10 manual_curation exon 27081753 27082016 . + . Parent=GSCOCT00033823001 | |
| 52365 chr10 manual_curation exon 27082165 27083676 . + . Parent=GSCOCT00033823001 | |
| 52366 chr10 manual_curation CDS 27082421 27083266 . + 0 Parent=GSCOCT00033823001 | |
| 52367 chr10 manual_curation gene 27086291 27089517 . - . ID=GSCOCG00033824001;Name=Cc10_g16120 | |
| 52368 chr10 manual_curation mRNA 27086291 27089517 . - . ID=GSCOCT00033824001;Parent=GSCOCG00033824001;Name=Cc10_g16120 | |
| 52369 chr10 manual_curation polypeptide 27086650 27089517 . - . ID=GSCOCP00033824001;Dbxref=InterPro:IPR009044,InterPro:IPR013742,PFAM:PF08536,SUPERFAMILY:SSF54447,TAIR:AT1G14410.1,TAIR:AT1G71260.1,TAIR:AT2G02740.1,TrEMBL:A9PCM9,TrEMBL:B9GXF0,TrEMBL:D9J034;Derives_from=GSCOCT00033824001;Name=Cc10_g16120;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:WHIRLY 2,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033824001~ WHIRLY 2~ unknown_gene~ fragment;original_location=complement(join(1944514..1944519%2C1944045..1944139%2C1943865..1943938%2C1942601..1942689%2C1941652..1941768));owner=coffea | |
| 52370 chr10 manual_curation exon 27086291 27086766 . - . Parent=GSCOCT00033824001 | |
| 52371 chr10 manual_curation exon 27087599 27087687 . - . Parent=GSCOCT00033824001 | |
| 52372 chr10 manual_curation exon 27088863 27088936 . - . Parent=GSCOCT00033824001 | |
| 52373 chr10 manual_curation exon 27089043 27089137 . - . Parent=GSCOCT00033824001 | |
| 52374 chr10 manual_curation exon 27089512 27089517 . - . Parent=GSCOCT00033824001 | |
| 52375 chr10 manual_curation CDS 27086650 27086766 . - 0 Parent=GSCOCT00033824001 | |
| 52376 chr10 manual_curation CDS 27087599 27087687 . - 1 Parent=GSCOCT00033824001 | |
| 52377 chr10 manual_curation CDS 27088863 27088936 . - 2 Parent=GSCOCT00033824001 | |
| 52378 chr10 manual_curation CDS 27089043 27089137 . - 0 Parent=GSCOCT00033824001 | |
| 52379 chr10 manual_curation CDS 27089512 27089517 . - 0 Parent=GSCOCT00033824001 | |
| 52380 chr10 manual_curation gene 27089613 27091416 . - . ID=GSCOCG00033825001;Name=Cc10_g16130 | |
| 52381 chr10 manual_curation mRNA 27089613 27091416 . - . ID=GSCOCT00033825001;Parent=GSCOCG00033825001;Name=Cc10_g16130 | |
| 52382 chr10 manual_curation polypeptide 27089613 27090227 . - . ID=GSCOCP00033825001;Dbxref=InterPro:IPR009044,InterPro:IPR013742,PFAM:PF08536,SUPERFAMILY:SSF54447,TAIR:AT1G14410.1,TAIR:AT1G71260.1,TAIR:AT2G02740.1,TrEMBL:A5B3B9,TrEMBL:D7SMW1,TrEMBL:D9J034;Derives_from=GSCOCT00033825001;Name=Cc10_g16130;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:Why2 protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033825001~ Why2 protein~ unknown_gene~ fragment;original_location=complement(join(1945073..1945229%2C1944851..1944948%2C1944615..1944758));owner=coffea | |
| 52383 chr10 manual_curation exon 27089613 27089756 . - . Parent=GSCOCT00033825001 | |
| 52384 chr10 manual_curation exon 27089849 27089946 . - . Parent=GSCOCT00033825001 | |
| 52385 chr10 manual_curation exon 27090071 27091416 . - . Parent=GSCOCT00033825001 | |
| 52386 chr10 manual_curation CDS 27089613 27089756 . - 0 Parent=GSCOCT00033825001 | |
| 52387 chr10 manual_curation CDS 27089849 27089946 . - 1 Parent=GSCOCT00033825001 | |
| 52388 chr10 manual_curation CDS 27090071 27090227 . - 0 Parent=GSCOCT00033825001 | |
| 52389 chr10 manual_curation gene 27093139 27096835 . - . ID=GSCOCG00033826001;Name=Cc10_g16140 | |
| 52390 chr10 manual_curation mRNA 27093139 27096835 . - . ID=GSCOCT00033826001;Parent=GSCOCG00033826001;Name=Cc10_g16140 | |
| 52391 chr10 manual_curation polypeptide 27093442 27096772 . - . ID=GSCOCP00033826001;Dbxref=InterPro:IPR000109,InterPro:IPR016196,PFAM:PF00854,SUPERFAMILY:SSF103473,SwissProt:Q56XQ6,SwissProt:Q8H157,SwissProt:Q93VV5,TAIR:AT1G33440.1,TAIR:AT1G59740.1,TAIR:AT1G69850.1,TrEMBL:B9N1P0,TrEMBL:B9N782,TrEMBL:F6GVX9;Derives_from=GSCOCT00033826001;Name=Cc10_g16140;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006857,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Probable peptide/nitrate transporter At1g33440,CC_functional_completeness:complete,CC_gene:At1g33440,CC_gene:At1g59740,CC_gene:NRT1.2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033826001~ Probable peptide/nitrate transporter At1g33440~ At1g33440~ complete;original_location=complement(join(1951594..1951774%2C1950956..1951173%2C1950356..1950805%2C1949738..1949880%2C1948444..1949317));owner=coffea | |
| 52392 chr10 manual_curation exon 27093139 27094315 . - . Parent=GSCOCT00033826001 | |
| 52393 chr10 manual_curation exon 27094736 27094878 . - . Parent=GSCOCT00033826001 | |
| 52394 chr10 manual_curation exon 27095354 27095803 . - . Parent=GSCOCT00033826001 | |
| 52395 chr10 manual_curation exon 27095954 27096171 . - . Parent=GSCOCT00033826001 | |
| 52396 chr10 manual_curation exon 27096592 27096835 . - . Parent=GSCOCT00033826001 | |
| 52397 chr10 manual_curation CDS 27093442 27094315 . - 2 Parent=GSCOCT00033826001 | |
| 52398 chr10 manual_curation CDS 27094736 27094878 . - 0 Parent=GSCOCT00033826001 | |
| 52399 chr10 manual_curation CDS 27095354 27095803 . - 0 Parent=GSCOCT00033826001 | |
| 52400 chr10 manual_curation CDS 27095954 27096171 . - 1 Parent=GSCOCT00033826001 | |
| 52401 chr10 manual_curation CDS 27096592 27096772 . - 0 Parent=GSCOCT00033826001 | |
| 52402 chr10 manual_curation gene 27110409 27114216 . + . ID=GSCOCG00033829001;Name=Cc10_g16150 | |
| 52403 chr10 manual_curation mRNA 27110409 27114216 . + . ID=GSCOCT00033829001;Parent=GSCOCG00033829001;Name=Cc10_g16150 | |
| 52404 chr10 manual_curation polypeptide 27110524 27113945 . + . ID=GSCOCP00033829001;Dbxref=TAIR:AT1G71310.2,TAIR:AT5G47870.1,TrEMBL:B9N1N2,TrEMBL:B9R8Y4,TrEMBL:D7SMV8;Derives_from=GSCOCT00033829001;Name=Cc10_g16150;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Predicted protein (Fragment),CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033829001~ Predicted protein (Fragment)~ unknown_gene~ modules;original_location=join(1965526..1965899%2C1966877..1966914%2C1967011..1967105%2C1968804..1968947);owner=coffea | |
| 52405 chr10 manual_curation exon 27110409 27110897 . + . Parent=GSCOCT00033829001 | |
| 52406 chr10 manual_curation exon 27111875 27111912 . + . Parent=GSCOCT00033829001 | |
| 52407 chr10 manual_curation exon 27112009 27112103 . + . Parent=GSCOCT00033829001 | |
| 52408 chr10 manual_curation exon 27113802 27114216 . + . Parent=GSCOCT00033829001 | |
| 52409 chr10 manual_curation CDS 27110524 27110897 . + 0 Parent=GSCOCT00033829001 | |
| 52410 chr10 manual_curation CDS 27111875 27111912 . + 2 Parent=GSCOCT00033829001 | |
| 52411 chr10 manual_curation CDS 27112009 27112103 . + 1 Parent=GSCOCT00033829001 | |
| 52412 chr10 manual_curation CDS 27113802 27113945 . + 0 Parent=GSCOCT00033829001 | |
| 52413 chr10 manual_curation gene 27118313 27125041 . + . ID=GSCOCG00033830001;Name=Cc10_g16160 | |
| 52414 chr10 manual_curation mRNA 27118313 27125041 . + . ID=GSCOCT00033830001;Parent=GSCOCG00033830001;Name=Cc10_g16160 | |
| 52415 chr10 manual_curation polypeptide 27118691 27123623 . + . ID=GSCOCP00033830001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR012677,PFAM:PF00076,PROFILE:PS50102,SMART:SM00360,SwissProt:Q76LC6,SwissProt:Q9H0Z9,SwissProt:Q9I8B3,TAIR:AT1G22910.3,TAIR:AT1G33470.1,TAIR:AT2G46780.1,TrEMBL:B9I875,TrEMBL:B9R8Y3,TrEMBL:F6GVY4;Derives_from=GSCOCT00033830001;Name=Cc10_g16160;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,CC_EC_number:missing_EC_number,PRODUCT:RNA-binding (RRM/RBD/RNP motifs) family protein,CC_functional_completeness:complete,CC_gene:rbm24,CC_gene:RBM38,CC_gene:rbm24-b;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033830001~ RNA-binding (RRM/RBD/RNP motifs) family protein~ rbm24~ complete;original_location=join(1973693..1973875%2C1974175..1974307%2C1975243..1975378%2C1976038..1976074%2C1977373..1977724%2C1978600..1978625);owner=coffea | |
| 52416 chr10 manual_curation exon 27118313 27118873 . + . Parent=GSCOCT00033830001 | |
| 52417 chr10 manual_curation exon 27119173 27119305 . + . Parent=GSCOCT00033830001 | |
| 52418 chr10 manual_curation exon 27120241 27120376 . + . Parent=GSCOCT00033830001 | |
| 52419 chr10 manual_curation exon 27121036 27121072 . + . Parent=GSCOCT00033830001 | |
| 52420 chr10 manual_curation exon 27122371 27122722 . + . Parent=GSCOCT00033830001 | |
| 52421 chr10 manual_curation exon 27123598 27125041 . + . Parent=GSCOCT00033830001 | |
| 52422 chr10 manual_curation CDS 27118691 27118873 . + 0 Parent=GSCOCT00033830001 | |
| 52423 chr10 manual_curation CDS 27119173 27119305 . + 0 Parent=GSCOCT00033830001 | |
| 52424 chr10 manual_curation CDS 27120241 27120376 . + 1 Parent=GSCOCT00033830001 | |
| 52425 chr10 manual_curation CDS 27121036 27121072 . + 2 Parent=GSCOCT00033830001 | |
| 52426 chr10 manual_curation CDS 27122371 27122722 . + 0 Parent=GSCOCT00033830001 | |
| 52427 chr10 manual_curation CDS 27123598 27123623 . + 1 Parent=GSCOCT00033830001 | |
| 52428 chr10 manual_curation gene 27127719 27145316 . - . ID=GSCOCG00033831001;Name=Cc10_g16170 | |
| 52429 chr10 manual_curation mRNA 27127719 27145316 . - . ID=GSCOCT00033831001;Parent=GSCOCG00033831001;Name=Cc10_g16170 | |
| 52430 chr10 manual_curation polypeptide 27128001 27144940 . - . ID=GSCOCP00033831001;Dbxref=InterPro:IPR007258,PANTHER:PTHR14190,PFAM:PF04129,SwissProt:O55166,SwissProt:Q8C754,SwissProt:Q8N1B4,TAIR:AT1G71270.1,TAIR:AT1G71300.1,TrEMBL:B9S0R4,TrEMBL:D7T9L2,TrEMBL:G7I669;Derives_from=GSCOCT00033831001;Name=Cc10_g16170;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Vacuolar protein sorting-associated protein 52 homolog,CC_functional_completeness:complete,CC_gene:VPS52,CC_gene:Vps52;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033831001~ Putative Vacuolar protein sorting-associated protein 52 homolog~ VPS52~ complete;original_location=complement(join(1999755..1999942%2C1999154..1999211%2C1998893..1998988%2C1998486..1998587%2C1997238..1997321%2C1997030..1997110%2C1995428..1995571%2C1995114..1995205%2C1993493..1993574%2C1990697..1990879%2C1989974..1990089%2C1989816..1989874%2C1989357..1989457%2C1985788..1985838%2C1984691..1984870%2C1984471..1984605%2C1984189..1984263%2C1983388..1983445%2C1983003..1983307));owner=coffea | |
| 52431 chr10 manual_curation exon 27127719 27128305 . - . Parent=GSCOCT00033831001 | |
| 52432 chr10 manual_curation exon 27128386 27128443 . - . Parent=GSCOCT00033831001 | |
| 52433 chr10 manual_curation exon 27129187 27129261 . - . Parent=GSCOCT00033831001 | |
| 52434 chr10 manual_curation exon 27129469 27129603 . - . Parent=GSCOCT00033831001 | |
| 52435 chr10 manual_curation exon 27129689 27129868 . - . Parent=GSCOCT00033831001 | |
| 52436 chr10 manual_curation exon 27130786 27130836 . - . Parent=GSCOCT00033831001 | |
| 52437 chr10 manual_curation exon 27134355 27134455 . - . Parent=GSCOCT00033831001 | |
| 52438 chr10 manual_curation exon 27134814 27134872 . - . Parent=GSCOCT00033831001 | |
| 52439 chr10 manual_curation exon 27134972 27135087 . - . Parent=GSCOCT00033831001 | |
| 52440 chr10 manual_curation exon 27135695 27135877 . - . Parent=GSCOCT00033831001 | |
| 52441 chr10 manual_curation exon 27138491 27138572 . - . Parent=GSCOCT00033831001 | |
| 52442 chr10 manual_curation exon 27140112 27140203 . - . Parent=GSCOCT00033831001 | |
| 52443 chr10 manual_curation exon 27140426 27140569 . - . Parent=GSCOCT00033831001 | |
| 52444 chr10 manual_curation exon 27142028 27142108 . - . Parent=GSCOCT00033831001 | |
| 52445 chr10 manual_curation exon 27142236 27142319 . - . Parent=GSCOCT00033831001 | |
| 52446 chr10 manual_curation exon 27143484 27143585 . - . Parent=GSCOCT00033831001 | |
| 52447 chr10 manual_curation exon 27143891 27143986 . - . Parent=GSCOCT00033831001 | |
| 52448 chr10 manual_curation exon 27144152 27144209 . - . Parent=GSCOCT00033831001 | |
| 52449 chr10 manual_curation exon 27144753 27145316 . - . Parent=GSCOCT00033831001 | |
| 52450 chr10 manual_curation CDS 27128001 27128305 . - 1 Parent=GSCOCT00033831001 | |
| 52451 chr10 manual_curation CDS 27128386 27128443 . - 0 Parent=GSCOCT00033831001 | |
| 52452 chr10 manual_curation CDS 27129187 27129261 . - 0 Parent=GSCOCT00033831001 | |
| 52453 chr10 manual_curation CDS 27129469 27129603 . - 0 Parent=GSCOCT00033831001 | |
| 52454 chr10 manual_curation CDS 27129689 27129868 . - 0 Parent=GSCOCT00033831001 | |
| 52455 chr10 manual_curation CDS 27130786 27130836 . - 0 Parent=GSCOCT00033831001 | |
| 52456 chr10 manual_curation CDS 27134355 27134455 . - 1 Parent=GSCOCT00033831001 | |
| 52457 chr10 manual_curation CDS 27134814 27134872 . - 2 Parent=GSCOCT00033831001 | |
| 52458 chr10 manual_curation CDS 27134972 27135087 . - 0 Parent=GSCOCT00033831001 | |
| 52459 chr10 manual_curation CDS 27135695 27135877 . - 0 Parent=GSCOCT00033831001 | |
| 52460 chr10 manual_curation CDS 27138491 27138572 . - 2 Parent=GSCOCT00033831001 | |
| 52461 chr10 manual_curation CDS 27140112 27140203 . - 0 Parent=GSCOCT00033831001 | |
| 52462 chr10 manual_curation CDS 27140426 27140569 . - 0 Parent=GSCOCT00033831001 | |
| 52463 chr10 manual_curation CDS 27142028 27142108 . - 0 Parent=GSCOCT00033831001 | |
| 52464 chr10 manual_curation CDS 27142236 27142319 . - 0 Parent=GSCOCT00033831001 | |
| 52465 chr10 manual_curation CDS 27143484 27143585 . - 0 Parent=GSCOCT00033831001 | |
| 52466 chr10 manual_curation CDS 27143891 27143986 . - 0 Parent=GSCOCT00033831001 | |
| 52467 chr10 manual_curation CDS 27144152 27144209 . - 2 Parent=GSCOCT00033831001 | |
| 52468 chr10 manual_curation CDS 27144753 27144940 . - 0 Parent=GSCOCT00033831001 | |
| 52469 chr10 manual_curation gene 27146328 27149442 . - . ID=GSCOCG00033832001;Name=Cc10_g16180 | |
| 52470 chr10 manual_curation mRNA 27146328 27149442 . - . ID=GSCOCT00033832001;Parent=GSCOCG00033832001;Name=Cc10_g16180 | |
| 52471 chr10 manual_curation polypeptide 27146674 27149227 . - . ID=GSCOCP00033832001;Dbxref=InterPro:IPR002659,PANTHER:PTHR11214,PFAM:PF01762,SwissProt:A8MRC7,SwissProt:Q9C809,SwissProt:Q9MAP8,TAIR:AT1G05170.2,TAIR:AT1G32930.1,TAIR:AT1G33430.2,TrEMBL:B9RIE2,TrEMBL:F6GVX6,TrEMBL:I1LNQ3;Derives_from=GSCOCT00033832001;Name=Cc10_g16180;Ontology_term=CC_evidence_code:ISS,GO:0006486,GO:0008378,GO:0016020,CC_EC_number:2.4.1.134,PRODUCT:Probable beta-1%2C3-galactosyltransferase 8,CC_functional_completeness:complete,CC_gene:B3GALT8,CC_gene:B3GALT6,CC_gene:B3GALT2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033832001~ Probable beta-1%2C3-galactosyltransferase 8~ B3GALT8~ complete;original_location=complement(join(2004123..2004229%2C2003963..2004065%2C2003766..2003833%2C2003289..2003536%2C2002826..2003083%2C2002613..2002700%2C2002248..2002373%2C2001937..2002046%2C2001676..2001836));owner=coffea | |
| 52472 chr10 manual_curation exon 27146328 27146834 . - . Parent=GSCOCT00033832001 | |
| 52473 chr10 manual_curation exon 27146935 27147044 . - . Parent=GSCOCT00033832001 | |
| 52474 chr10 manual_curation exon 27147246 27147371 . - . Parent=GSCOCT00033832001 | |
| 52475 chr10 manual_curation exon 27147611 27147698 . - . Parent=GSCOCT00033832001 | |
| 52476 chr10 manual_curation exon 27147824 27148081 . - . Parent=GSCOCT00033832001 | |
| 52477 chr10 manual_curation exon 27148287 27148534 . - . Parent=GSCOCT00033832001 | |
| 52478 chr10 manual_curation exon 27148764 27148831 . - . Parent=GSCOCT00033832001 | |
| 52479 chr10 manual_curation exon 27148961 27149063 . - . Parent=GSCOCT00033832001 | |
| 52480 chr10 manual_curation exon 27149121 27149442 . - . Parent=GSCOCT00033832001 | |
| 52481 chr10 manual_curation CDS 27146674 27146834 . - 1 Parent=GSCOCT00033832001 | |
| 52482 chr10 manual_curation CDS 27146935 27147044 . - 2 Parent=GSCOCT00033832001 | |
| 52483 chr10 manual_curation CDS 27147246 27147371 . - 2 Parent=GSCOCT00033832001 | |
| 52484 chr10 manual_curation CDS 27147611 27147698 . - 1 Parent=GSCOCT00033832001 | |
| 52485 chr10 manual_curation CDS 27147824 27148081 . - 1 Parent=GSCOCT00033832001 | |
| 52486 chr10 manual_curation CDS 27148287 27148534 . - 2 Parent=GSCOCT00033832001 | |
| 52487 chr10 manual_curation CDS 27148764 27148831 . - 0 Parent=GSCOCT00033832001 | |
| 52488 chr10 manual_curation CDS 27148961 27149063 . - 2 Parent=GSCOCT00033832001 | |
| 52489 chr10 manual_curation CDS 27149121 27149227 . - 0 Parent=GSCOCT00033832001 | |
| 52490 chr10 manual_curation gene 27154991 27157138 . + . ID=GSCOCG00033833001;Name=Cc10_g16190 | |
| 52491 chr10 manual_curation mRNA 27154991 27157138 . + . ID=GSCOCT00033833001;Parent=GSCOCG00033833001;Name=Cc10_g16190 | |
| 52492 chr10 manual_curation polypeptide 27154991 27157138 . + . ID=GSCOCP00033833001;Dbxref=InterPro:IPR003441,PFAM:PF02365,PROFILE:PS51005,SUPERFAMILY:SSF101941,SwissProt:Q9C878,SwissProt:Q9MA17,SwissProt:Q9SV87,TAIR:AT1G33280.1,TAIR:AT1G79580.1,TAIR:AT4G10350.1,TrEMBL:A5BPQ6,TrEMBL:F6GVX3,TrEMBL:I1L5S7;Derives_from=GSCOCT00033833001;Name=Cc10_g16190;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Protein BEARSKIN1,CC_functional_completeness:complete,CC_gene:BRN2,CC_gene:BRN1,CC_gene:SMB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033833001~ Protein BEARSKIN1~ BRN2~ complete;original_location=join(2009993..2010155%2C2010632..2010909%2C2011421..2011786%2C2011859..2012140);owner=coffea | |
| 52493 chr10 manual_curation exon 27154991 27155153 . + . Parent=GSCOCT00033833001 | |
| 52494 chr10 manual_curation exon 27155630 27155907 . + . Parent=GSCOCT00033833001 | |
| 52495 chr10 manual_curation exon 27156419 27156784 . + . Parent=GSCOCT00033833001 | |
| 52496 chr10 manual_curation exon 27156857 27157138 . + . Parent=GSCOCT00033833001 | |
| 52497 chr10 manual_curation CDS 27154991 27155153 . + 0 Parent=GSCOCT00033833001 | |
| 52498 chr10 manual_curation CDS 27155630 27155907 . + 1 Parent=GSCOCT00033833001 | |
| 52499 chr10 manual_curation CDS 27156419 27156784 . + 0 Parent=GSCOCT00033833001 | |
| 52500 chr10 manual_curation CDS 27156857 27157138 . + 0 Parent=GSCOCT00033833001 | |
| 52501 chr10 manual_curation gene 27161415 27164474 . - . ID=GSCOCG00033835001;Name=Cc10_g16200 | |
| 52502 chr10 manual_curation mRNA 27161415 27164474 . - . ID=GSCOCT00033835001;Parent=GSCOCG00033835001;Name=Cc10_g16200 | |
| 52503 chr10 manual_curation polypeptide 27161477 27164441 . - . ID=GSCOCP00033835001;Dbxref=InterPro:IPR002938,InterPro:IPR003042,PFAM:PF01494,PRINTS:PR00420,SwissProt:P93236,SwissProt:Q40412,SwissProt:Q9F131,TAIR:AT4G15760.1,TAIR:AT4G38540.1,TAIR:AT5G05320.1,TrEMBL:B9RN17,TrEMBL:D7MAD1,TrEMBL:F4JK84;Derives_from=GSCOCT00033835001;Name=Cc10_g16200;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0008152,GO:0016491,GO:0055114,CC_EC_number:1.14.13.90,PRODUCT:Putative 3-hydroxybenzoate 6-hydroxylase 1,CC_functional_completeness:complete,CC_gene:xlnD,CC_gene:ABA2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033835001~ Putative 3-hydroxybenzoate 6-hydroxylase 1~ xlnD~ complete;original_location=complement(join(2019355..2019443%2C2019097..2019243%2C2018145..2018198%2C2017856..2018024%2C2017368..2017596%2C2016479..2017011));owner=coffea | |
| 52504 chr10 manual_curation exon 27161415 27162009 . - . Parent=GSCOCT00033835001 | |
| 52505 chr10 manual_curation exon 27162366 27162594 . - . Parent=GSCOCT00033835001 | |
| 52506 chr10 manual_curation exon 27162854 27163022 . - . Parent=GSCOCT00033835001 | |
| 52507 chr10 manual_curation exon 27163143 27163196 . - . Parent=GSCOCT00033835001 | |
| 52508 chr10 manual_curation exon 27164095 27164241 . - . Parent=GSCOCT00033835001 | |
| 52509 chr10 manual_curation exon 27164353 27164474 . - . Parent=GSCOCT00033835001 | |
| 52510 chr10 manual_curation CDS 27161477 27162009 . - 1 Parent=GSCOCT00033835001 | |
| 52511 chr10 manual_curation CDS 27162366 27162594 . - 0 Parent=GSCOCT00033835001 | |
| 52512 chr10 manual_curation CDS 27162854 27163022 . - 2 Parent=GSCOCT00033835001 | |
| 52513 chr10 manual_curation CDS 27163143 27163196 . - 2 Parent=GSCOCT00033835001 | |
| 52514 chr10 manual_curation CDS 27164095 27164241 . - 2 Parent=GSCOCT00033835001 | |
| 52515 chr10 manual_curation CDS 27164353 27164441 . - 0 Parent=GSCOCT00033835001 | |
| 52516 chr10 manual_curation gene 27181855 27183899 . - . ID=GSCOCG00033837001;Name=Cc10_g16210 | |
| 52517 chr10 manual_curation mRNA 27181855 27183899 . - . ID=GSCOCT00033837001;Parent=GSCOCG00033837001;Name=Cc10_g16210 | |
| 52518 chr10 manual_curation polypeptide 27182110 27183741 . - . ID=GSCOCP00033837001;Dbxref=InterPro:IPR001344,InterPro:IPR022796,PANTHER:PTHR21649,PFAM:PF00504,SwissProt:P12330,SwissProt:P12331,SwissProt:Q9XF89,TAIR:AT1G29920.1,TAIR:AT1G29930.1,TAIR:AT4G10340.1,TrEMBL:A5B523,TrEMBL:B9S1T5,TrEMBL:F6GVX0;Derives_from=GSCOCT00033837001;Name=Cc10_g16210;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Chlorophyll a-b binding protein CP26%2C chloroplastic,CC_functional_completeness:complete,CC_gene:LHCB5,CC_gene:CAB1R,CC_gene:CAB2R;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033837001~ Chlorophyll a-b binding protein CP26%2C chloroplastic~ LHCB5~ complete;original_location=complement(join(2038527..2038743%2C2038235..2038319%2C2038054..2038104%2C2037751..2037871%2C2037494..2037628%2C2037112..2037372));owner=coffea | |
| 52519 chr10 manual_curation exon 27181855 27182370 . - . Parent=GSCOCT00033837001 | |
| 52520 chr10 manual_curation exon 27182492 27182626 . - . Parent=GSCOCT00033837001 | |
| 52521 chr10 manual_curation exon 27182749 27182869 . - . Parent=GSCOCT00033837001 | |
| 52522 chr10 manual_curation exon 27183052 27183102 . - . Parent=GSCOCT00033837001 | |
| 52523 chr10 manual_curation exon 27183233 27183317 . - . Parent=GSCOCT00033837001 | |
| 52524 chr10 manual_curation exon 27183525 27183899 . - . Parent=GSCOCT00033837001 | |
| 52525 chr10 manual_curation CDS 27182110 27182370 . - 0 Parent=GSCOCT00033837001 | |
| 52526 chr10 manual_curation CDS 27182492 27182626 . - 0 Parent=GSCOCT00033837001 | |
| 52527 chr10 manual_curation CDS 27182749 27182869 . - 2 Parent=GSCOCT00033837001 | |
| 52528 chr10 manual_curation CDS 27183052 27183102 . - 2 Parent=GSCOCT00033837001 | |
| 52529 chr10 manual_curation CDS 27183233 27183317 . - 1 Parent=GSCOCT00033837001 | |
| 52530 chr10 manual_curation CDS 27183525 27183741 . - 0 Parent=GSCOCT00033837001 | |
| 52531 chr10 manual_curation gene 27184875 27194436 . - . ID=GSCOCG00033839001;Name=Cc10_g16220 | |
| 52532 chr10 manual_curation mRNA 27184875 27194436 . - . ID=GSCOCT00033839001;Parent=GSCOCG00033839001;Name=Cc10_g16220 | |
| 52533 chr10 manual_curation polypeptide 27185345 27194275 . - . ID=GSCOCP00033839001;Dbxref=TAIR:AT4G10330.1,TrEMBL:B9N1S4,TrEMBL:D7SMT9,TrEMBL:Q9SV88;Derives_from=GSCOCT00033839001;Name=Cc10_g16220;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:glycine-rich protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033839001~ glycine-rich protein~ unknown_gene~ complete;original_location=complement(join(2049082..2049277%2C2048818..2048959%2C2040347..2040443));owner=coffea | |
| 52534 chr10 manual_curation exon 27184875 27185441 . - . Parent=GSCOCT00033839001 | |
| 52535 chr10 manual_curation exon 27193816 27193957 . - . Parent=GSCOCT00033839001 | |
| 52536 chr10 manual_curation exon 27194080 27194436 . - . Parent=GSCOCT00033839001 | |
| 52537 chr10 manual_curation CDS 27185345 27185441 . - 2 Parent=GSCOCT00033839001 | |
| 52538 chr10 manual_curation CDS 27193816 27193957 . - 1 Parent=GSCOCT00033839001 | |
| 52539 chr10 manual_curation CDS 27194080 27194275 . - 0 Parent=GSCOCT00033839001 | |
| 52540 chr10 manual_curation gene 27194905 27203458 . + . ID=GSCOCG00033840001;Name=Cc10_g16230 | |
| 52541 chr10 manual_curation mRNA 27194905 27203458 . + . ID=GSCOCT00033840001;Parent=GSCOCG00033840001;Name=Cc10_g16230 | |
| 52542 chr10 manual_curation polypeptide 27194905 27202869 . + . ID=GSCOCP00033840001;Dbxref=InterPro:IPR003593,InterPro:IPR003959,PFAM:PF00004,SMART:SM00382,SwissProt:O19920,SwissProt:P49540,SwissProt:P51281,TAIR:AT1G33290.1,TAIR:AT1G73170.1,TAIR:AT3G10420.2,TrEMBL:A5B524,TrEMBL:D7SMT8,TrEMBL:I1ITL7;Derives_from=GSCOCT00033840001;Name=Cc10_g16230;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0017111,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized protein ycf45,CC_functional_completeness:modules,CC_gene:ycf45;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033840001~ Putative Uncharacterized protein ycf45~ ycf45~ modules;original_location=join(2049907..2050242%2C2050664..2050726%2C2051076..2051153%2C2052304..2052524%2C2054456..2054528%2C2054655..2054939%2C2056023..2056166%2C2057181..2057231%2C2057812..2057871);owner=coffea | |
| 52543 chr10 manual_curation exon 27194905 27195240 . + . Parent=GSCOCT00033840001 | |
| 52544 chr10 manual_curation exon 27195662 27195724 . + . Parent=GSCOCT00033840001 | |
| 52545 chr10 manual_curation exon 27196074 27196151 . + . Parent=GSCOCT00033840001 | |
| 52546 chr10 manual_curation exon 27197302 27197522 . + . Parent=GSCOCT00033840001 | |
| 52547 chr10 manual_curation exon 27199454 27199526 . + . Parent=GSCOCT00033840001 | |
| 52548 chr10 manual_curation exon 27199653 27199937 . + . Parent=GSCOCT00033840001 | |
| 52549 chr10 manual_curation exon 27201021 27201164 . + . Parent=GSCOCT00033840001 | |
| 52550 chr10 manual_curation exon 27202179 27202229 . + . Parent=GSCOCT00033840001 | |
| 52551 chr10 manual_curation exon 27202810 27203458 . + . Parent=GSCOCT00033840001 | |
| 52552 chr10 manual_curation CDS 27194905 27195240 . + 0 Parent=GSCOCT00033840001 | |
| 52553 chr10 manual_curation CDS 27195662 27195724 . + 0 Parent=GSCOCT00033840001 | |
| 52554 chr10 manual_curation CDS 27196074 27196151 . + 0 Parent=GSCOCT00033840001 | |
| 52555 chr10 manual_curation CDS 27197302 27197522 . + 0 Parent=GSCOCT00033840001 | |
| 52556 chr10 manual_curation CDS 27199454 27199526 . + 2 Parent=GSCOCT00033840001 | |
| 52557 chr10 manual_curation CDS 27199653 27199937 . + 0 Parent=GSCOCT00033840001 | |
| 52558 chr10 manual_curation CDS 27201021 27201164 . + 0 Parent=GSCOCT00033840001 | |
| 52559 chr10 manual_curation CDS 27202179 27202229 . + 0 Parent=GSCOCT00033840001 | |
| 52560 chr10 manual_curation CDS 27202810 27202869 . + 0 Parent=GSCOCT00033840001 | |
| 52561 chr10 manual_curation gene 27205691 27209384 . + . ID=GSCOCG00033841001;Name=Cc10_g16240 | |
| 52562 chr10 manual_curation mRNA 27205691 27209384 . + . ID=GSCOCT00033841001;Parent=GSCOCG00033841001;Name=Cc10_g16240 | |
| 52563 chr10 manual_curation polypeptide 27206209 27208965 . + . ID=GSCOCP00033841001;Dbxref=GENE3D:G3DSA:2.60.120.10,InterPro:IPR008579,InterPro:IPR011051,InterPro:IPR014710,PFAM:PF05899,SUPERFAMILY:SSF51182,TAIR:AT3G04300.1,TAIR:AT4G10300.1,TAIR:AT4G28703.1,TrEMBL:A9PG71,TrEMBL:B9S1T1,TrEMBL:C6SYR7;Derives_from=GSCOCT00033841001;Name=Cc10_g16240;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:RmlC-like cupins superfamily protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033841001~ RmlC-like cupins superfamily protein~ unknown_gene~ fragment;original_location=join(2061211..2061305%2C2063763..2063967);owner=coffea | |
| 52564 chr10 manual_curation exon 27205691 27206303 . + . Parent=GSCOCT00033841001 | |
| 52565 chr10 manual_curation exon 27208761 27209384 . + . Parent=GSCOCT00033841001 | |
| 52566 chr10 manual_curation CDS 27206209 27206303 . + 0 Parent=GSCOCT00033841001 | |
| 52567 chr10 manual_curation CDS 27208761 27208965 . + 2 Parent=GSCOCT00033841001 | |
| 52568 chr10 manual_curation gene 27218142 27223596 . + . ID=GSCOCG00033842001;Name=Cc10_g16250 | |
| 52569 chr10 manual_curation mRNA 27218142 27223596 . + . ID=GSCOCT00033842001;Parent=GSCOCG00033842001;Name=Cc10_g16250 | |
| 52570 chr10 manual_curation polypeptide 27218352 27223333 . + . ID=GSCOCP00033842001;Dbxref=GENE3D:G3DSA:2.60.120.10,InterPro:IPR008579,InterPro:IPR011051,InterPro:IPR014710,PFAM:PF05899,SUPERFAMILY:SSF51182,TAIR:AT3G04300.1,TAIR:AT4G10280.1,TAIR:AT4G10300.1,TrEMBL:B9SQA9,TrEMBL:F6GVW8,TrEMBL:I1MQ98;Derives_from=GSCOCT00033842001;Name=Cc10_g16250;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:RmlC-like cupins superfamily protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033842001~ RmlC-like cupins superfamily protein~ unknown_gene~ fragment;original_location=join(2073354..2073487%2C2078128..2078335);owner=coffea | |
| 52571 chr10 manual_curation exon 27218142 27218485 . + . Parent=GSCOCT00033842001 | |
| 52572 chr10 manual_curation exon 27223126 27223596 . + . Parent=GSCOCT00033842001 | |
| 52573 chr10 manual_curation CDS 27218352 27218485 . + 0 Parent=GSCOCT00033842001 | |
| 52574 chr10 manual_curation CDS 27223126 27223333 . + 2 Parent=GSCOCT00033842001 | |
| 52575 chr10 manual_curation gene 27224745 27226977 . + . ID=GSCOCG00033843001;Name=Cc10_g16260 | |
| 52576 chr10 manual_curation mRNA 27224745 27226977 . + . ID=GSCOCT00033843001;Parent=GSCOCG00033843001;Name=Cc10_g16260 | |
| 52577 chr10 manual_curation polypeptide 27224871 27226575 . + . ID=GSCOCP00033843001;Dbxref=InterPro:IPR002173,InterPro:IPR011611,PFAM:PF00294,PROSITE:PS00583,PROSITE:PS00584,SwissProt:A2YQL4,SwissProt:O82616,SwissProt:Q0J8G4,TAIR:AT1G06020.1,TAIR:AT3G59480.1,TAIR:AT4G10260.1,TrEMBL:B9N1S1,TrEMBL:G7L6C7,TrEMBL:I1LC17;Derives_from=GSCOCT00033843001;Name=Cc10_g16260;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.7.1.4,PRODUCT:Putative fructokinase-5,CC_functional_completeness:complete,CC_gene:At4g10260,CC_gene:FRK2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033843001~ Putative fructokinase-5~ At4g10260~ complete;original_location=join(2079873..2080013%2C2080363..2080773%2C2080974..2081030%2C2081223..2081339%2C2081440..2081577);owner=coffea | |
| 52578 chr10 manual_curation exon 27224745 27225011 . + . Parent=GSCOCT00033843001 | |
| 52579 chr10 manual_curation exon 27225361 27225771 . + . Parent=GSCOCT00033843001 | |
| 52580 chr10 manual_curation exon 27225972 27226028 . + . Parent=GSCOCT00033843001 | |
| 52581 chr10 manual_curation exon 27226221 27226337 . + . Parent=GSCOCT00033843001 | |
| 52582 chr10 manual_curation exon 27226438 27226977 . + . Parent=GSCOCT00033843001 | |
| 52583 chr10 manual_curation CDS 27224871 27225011 . + 0 Parent=GSCOCT00033843001 | |
| 52584 chr10 manual_curation CDS 27225361 27225771 . + 0 Parent=GSCOCT00033843001 | |
| 52585 chr10 manual_curation CDS 27225972 27226028 . + 0 Parent=GSCOCT00033843001 | |
| 52586 chr10 manual_curation CDS 27226221 27226337 . + 0 Parent=GSCOCT00033843001 | |
| 52587 chr10 manual_curation CDS 27226438 27226575 . + 0 Parent=GSCOCT00033843001 | |
| 52588 chr10 manual_curation gene 27231033 27246097 . - . ID=GSCOCG00033845001;Name=Cc10_g16270 | |
| 52589 chr10 manual_curation mRNA 27231033 27246097 . - . ID=GSCOCT00033845001;Parent=GSCOCG00033845001;Name=Cc10_g16270 | |
| 52590 chr10 manual_curation polypeptide 27231506 27246097 . - . ID=GSCOCP00033845001;Dbxref=InterPro:IPR004487,InterPro:IPR013093,InterPro:IPR019489,PANTHER:PTHR11262:SF4,PFAM:PF07724,PFAM:PF10431,SwissProt:B1Z9C8,SwissProt:Q1GGF7,SwissProt:Q5LUP9,TAIR:AT1G33360.1,TAIR:AT5G49840.1,TAIR:AT5G53350.1,TrEMBL:B9S1U1,TrEMBL:F6GVW6,TrEMBL:I1NID3;Derives_from=GSCOCT00033845001;Name=Cc10_g16270;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006457,GO:0051082,CC_EC_number:missing_EC_number,PRODUCT:ATP-dependent Clp protease,CC_functional_completeness:fragment,CC_gene:clpX;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033845001~ ATP-dependent Clp protease~ clpX~ fragment;original_location=complement(join(2101037..2101099%2C2100622..2100672%2C2098205..2098279%2C2098001..2098078%2C2096917..2096973%2C2090147..2090217%2C2089927..2090026%2C2089718..2089822%2C2088064..2088126%2C2087735..2087857%2C2087448..2087606%2C2086508..2086582));owner=coffea | |
| 52591 chr10 manual_curation exon 27231033 27231580 . - . Parent=GSCOCT00033845001 | |
| 52592 chr10 manual_curation exon 27232446 27232604 . - . Parent=GSCOCT00033845001 | |
| 52593 chr10 manual_curation exon 27232733 27232855 . - . Parent=GSCOCT00033845001 | |
| 52594 chr10 manual_curation exon 27233062 27233124 . - . Parent=GSCOCT00033845001 | |
| 52595 chr10 manual_curation exon 27234716 27234820 . - . Parent=GSCOCT00033845001 | |
| 52596 chr10 manual_curation exon 27234925 27235024 . - . Parent=GSCOCT00033845001 | |
| 52597 chr10 manual_curation exon 27235145 27235215 . - . Parent=GSCOCT00033845001 | |
| 52598 chr10 manual_curation exon 27241915 27241971 . - . Parent=GSCOCT00033845001 | |
| 52599 chr10 manual_curation exon 27242999 27243076 . - . Parent=GSCOCT00033845001 | |
| 52600 chr10 manual_curation exon 27243203 27243277 . - . Parent=GSCOCT00033845001 | |
| 52601 chr10 manual_curation exon 27245620 27245670 . - . Parent=GSCOCT00033845001 | |
| 52602 chr10 manual_curation exon 27246035 27246097 . - . Parent=GSCOCT00033845001 | |
| 52603 chr10 manual_curation CDS 27231506 27231580 . - 0 Parent=GSCOCT00033845001 | |
| 52604 chr10 manual_curation CDS 27232446 27232604 . - 0 Parent=GSCOCT00033845001 | |
| 52605 chr10 manual_curation CDS 27232733 27232855 . - 0 Parent=GSCOCT00033845001 | |
| 52606 chr10 manual_curation CDS 27233062 27233124 . - 0 Parent=GSCOCT00033845001 | |
| 52607 chr10 manual_curation CDS 27234716 27234820 . - 0 Parent=GSCOCT00033845001 | |
| 52608 chr10 manual_curation CDS 27234925 27235024 . - 2 Parent=GSCOCT00033845001 | |
| 52609 chr10 manual_curation CDS 27235145 27235215 . - 0 Parent=GSCOCT00033845001 | |
| 52610 chr10 manual_curation CDS 27241915 27241971 . - 0 Parent=GSCOCT00033845001 | |
| 52611 chr10 manual_curation CDS 27242999 27243076 . - 0 Parent=GSCOCT00033845001 | |
| 52612 chr10 manual_curation CDS 27243203 27243277 . - 0 Parent=GSCOCT00033845001 | |
| 52613 chr10 manual_curation CDS 27245620 27245670 . - 0 Parent=GSCOCT00033845001 | |
| 52614 chr10 manual_curation CDS 27246035 27246097 . - 0 Parent=GSCOCT00033845001 | |
| 52615 chr10 manual_curation gene 27246189 27247909 . - . ID=GSCOCG00033846001;Name=Cc10_g16280 | |
| 52616 chr10 manual_curation mRNA 27246189 27247909 . - . ID=GSCOCT00033846001;Parent=GSCOCG00033846001;Name=Cc10_g16280 | |
| 52617 chr10 manual_curation polypeptide 27246189 27247909 . - . ID=GSCOCP00033846001;Dbxref=InterPro:IPR004487,InterPro:IPR013093,PANTHER:PTHR11262:SF4,PFAM:PF07724,SwissProt:A4XHW1,SwissProt:B9MQ33,SwissProt:Q0AJI3,TAIR:AT1G33360.1,TAIR:AT5G49840.1,TAIR:AT5G53350.1,TrEMBL:B9S1U1,TrEMBL:F6GVW6,TrEMBL:G7KMW4;Derives_from=GSCOCT00033846001;Name=Cc10_g16280;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006457,GO:0051082,CC_EC_number:missing_EC_number,PRODUCT:ATP-dependent Clp protease,CC_functional_completeness:fragment,CC_gene:clpX;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033846001~ ATP-dependent Clp protease~ clpX~ fragment;original_location=complement(join(2102483..2102911%2C2101708..2101769%2C2101481..2101569%2C2101191..2101300));owner=coffea | |
| 52618 chr10 manual_curation exon 27246189 27246298 . - . Parent=GSCOCT00033846001 | |
| 52619 chr10 manual_curation exon 27246479 27246567 . - . Parent=GSCOCT00033846001 | |
| 52620 chr10 manual_curation exon 27246706 27246767 . - . Parent=GSCOCT00033846001 | |
| 52621 chr10 manual_curation exon 27247481 27247909 . - . Parent=GSCOCT00033846001 | |
| 52622 chr10 manual_curation CDS 27246189 27246298 . - 1 Parent=GSCOCT00033846001 | |
| 52623 chr10 manual_curation CDS 27246479 27246567 . - 2 Parent=GSCOCT00033846001 | |
| 52624 chr10 manual_curation CDS 27246706 27246767 . - 0 Parent=GSCOCT00033846001 | |
| 52625 chr10 manual_curation CDS 27247481 27247909 . - 0 Parent=GSCOCT00033846001 | |
| 52626 chr10 manual_curation gene 27248049 27249038 . - . ID=GSCOCG00033847001;Name=Cc10_g16290 | |
| 52627 chr10 manual_curation mRNA 27248049 27249038 . - . ID=GSCOCT00033847001;Parent=GSCOCG00033847001;Name=Cc10_g16290 | |
| 52628 chr10 manual_curation polypeptide 27248145 27248545 . - . ID=GSCOCP00033847001;Derives_from=GSCOCT00033847001;Name=Cc10_g16290;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033847001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(2103290..2103547%2C2103147..2103155));owner=coffea | |
| 52629 chr10 manual_curation exon 27248049 27248153 . - . Parent=GSCOCT00033847001 | |
| 52630 chr10 manual_curation exon 27248288 27249038 . - . Parent=GSCOCT00033847001 | |
| 52631 chr10 manual_curation CDS 27248145 27248153 . - 0 Parent=GSCOCT00033847001 | |
| 52632 chr10 manual_curation CDS 27248288 27248545 . - 0 Parent=GSCOCT00033847001 | |
| 52633 chr10 manual_curation gene 27256923 27258603 . - . ID=GSCOCG00033849001;Name=Cc10_g16300 | |
| 52634 chr10 manual_curation mRNA 27256923 27258603 . - . ID=GSCOCT00033849001;Parent=GSCOCG00033849001;Name=Cc10_g16300 | |
| 52635 chr10 manual_curation polypeptide 27257177 27258603 . - . ID=GSCOCP00033849001;Derives_from=GSCOCT00033849001;Name=Cc10_g16300;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033849001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(2113496..2113605%2C2112179..2112206));owner=coffea | |
| 52636 chr10 manual_curation exon 27256923 27257204 . - . Parent=GSCOCT00033849001 | |
| 52637 chr10 manual_curation exon 27258494 27258603 . - . Parent=GSCOCT00033849001 | |
| 52638 chr10 manual_curation CDS 27257177 27257204 . - 2 Parent=GSCOCT00033849001 | |
| 52639 chr10 manual_curation CDS 27258494 27258603 . - 0 Parent=GSCOCT00033849001 | |
| 52640 chr10 manual_curation gene 27260050 27265239 . - . ID=GSCOCG00033850001;Name=Cc10_g16310 | |
| 52641 chr10 manual_curation mRNA 27260050 27265239 . - . ID=GSCOCT00033850001;Parent=GSCOCG00033850001;Name=Cc10_g16310 | |
| 52642 chr10 manual_curation polypeptide 27260050 27265239 . - . ID=GSCOCP00033850001;Dbxref=TAIR:AT5G11680.1,TrEMBL:D7M4B3,TrEMBL:E5KC15,TrEMBL:Q9LYG2;Derives_from=GSCOCT00033850001;Name=Cc10_g16310;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:FUNCTIONS IN,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033850001~ FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cytosol%2C plasma membrane%3B EXPRESSED IN: 26 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: WW-domain-binding protein (InterPro:IPR018826)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).~ unknown_gene~ fragment;original_location=complement(join(2120132..2120241%2C2119080..2119191%2C2115052..2115126));owner=coffea | |
| 52643 chr10 manual_curation exon 27260050 27260124 . - . Parent=GSCOCT00033850001 | |
| 52644 chr10 manual_curation exon 27264078 27264189 . - . Parent=GSCOCT00033850001 | |
| 52645 chr10 manual_curation exon 27265130 27265239 . - . Parent=GSCOCT00033850001 | |
| 52646 chr10 manual_curation CDS 27260050 27260124 . - 0 Parent=GSCOCT00033850001 | |
| 52647 chr10 manual_curation CDS 27264078 27264189 . - 2 Parent=GSCOCT00033850001 | |
| 52648 chr10 manual_curation CDS 27265130 27265239 . - 0 Parent=GSCOCT00033850001 | |
| 52649 chr10 manual_curation gene 27266613 27270177 . - . ID=GSCOCG00011263001;Name=Cc10_g16320 | |
| 52650 chr10 manual_curation mRNA 27266613 27270177 . - . ID=GSCOCT00011263001;Parent=GSCOCG00011263001;Name=Cc10_g16320 | |
| 52651 chr10 manual_curation polypeptide 27266812 27269856 . - . ID=GSCOCP00011263001;Dbxref=InterPro:IPR004993,PFAM:PF03321,SwissProt:O81829,SwissProt:Q9FZ87,SwissProt:Q9LYU4,TAIR:AT1G28130.1,TAIR:AT5G13360.3,TAIR:AT5G13370.1,TrEMBL:A5APU4,TrEMBL:B9RG18,TrEMBL:F6HJ77;Derives_from=GSCOCT00011263001;Name=Cc10_g16320;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Indole-3-acetic acid-amido synthetase GH3.17,CC_functional_completeness:complete,CC_gene:GH3.17,CC_gene:GH3.12,CC_gene:GH3.5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011263001~ Indole-3-acetic acid-amido synthetase GH3.17~ GH3.17~ complete;original_location=complement(join(3763..4055%2C3300..3401%2C1997..2677%2C1830..1924%2C1011..1588));owner=coffea | |
| 52652 chr10 manual_curation exon 27266613 27267389 . - . Parent=GSCOCT00011263001 | |
| 52653 chr10 manual_curation exon 27267631 27267725 . - . Parent=GSCOCT00011263001 | |
| 52654 chr10 manual_curation exon 27267798 27268478 . - . Parent=GSCOCT00011263001 | |
| 52655 chr10 manual_curation exon 27269101 27269202 . - . Parent=GSCOCT00011263001 | |
| 52656 chr10 manual_curation exon 27269564 27270177 . - . Parent=GSCOCT00011263001 | |
| 52657 chr10 manual_curation CDS 27266812 27267389 . - 1 Parent=GSCOCT00011263001 | |
| 52658 chr10 manual_curation CDS 27267631 27267725 . - 2 Parent=GSCOCT00011263001 | |
| 52659 chr10 manual_curation CDS 27267798 27268478 . - 2 Parent=GSCOCT00011263001 | |
| 52660 chr10 manual_curation CDS 27269101 27269202 . - 2 Parent=GSCOCT00011263001 | |
| 52661 chr10 manual_curation CDS 27269564 27269856 . - 0 Parent=GSCOCT00011263001 | |
| 52662 chr10 manual_curation gene 27273496 27275705 . + . ID=GSCOCG00011264001;Name=Cc10_g16330 | |
| 52663 chr10 manual_curation mRNA 27273496 27275705 . + . ID=GSCOCT00011264001;Parent=GSCOCG00011264001;Name=Cc10_g16330 | |
| 52664 chr10 manual_curation polypeptide 27273496 27275425 . + . ID=GSCOCP00011264001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR001547,InterPro:IPR013781,InterPro:IPR017853,PFAM:PF00150,SUPERFAMILY:SSF51445,SwissProt:O48540,SwissProt:Q6YM50,SwissProt:Q9FZ03,TAIR:AT3G10890.1,TAIR:AT5G01930.1,TAIR:AT5G66460.1,TrEMBL:D7SN11,TrEMBL:D7SN14,TrEMBL:Q9FT02;Derives_from=GSCOCT00011264001;Name=Cc10_g16330;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0043169,CC_EC_number:missing_EC_number,PRODUCT:Mannan endo-1%2C4-beta-mannosidase 5,CC_functional_completeness:complete,CC_gene:MAN5,CC_gene:MAN2,CC_gene:MAN1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011264001~ Mannan endo-1%2C4-beta-mannosidase 5~ MAN5~ complete;original_location=join(7695..8045%2C8157..8351%2C8633..8755%2C8892..9094%2C9213..9624);owner=coffea | |
| 52665 chr10 manual_curation exon 27273496 27273846 . + . Parent=GSCOCT00011264001 | |
| 52666 chr10 manual_curation exon 27273958 27274152 . + . Parent=GSCOCT00011264001 | |
| 52667 chr10 manual_curation exon 27274434 27274556 . + . Parent=GSCOCT00011264001 | |
| 52668 chr10 manual_curation exon 27274693 27274895 . + . Parent=GSCOCT00011264001 | |
| 52669 chr10 manual_curation exon 27275014 27275705 . + . Parent=GSCOCT00011264001 | |
| 52670 chr10 manual_curation CDS 27273496 27273846 . + 0 Parent=GSCOCT00011264001 | |
| 52671 chr10 manual_curation CDS 27273958 27274152 . + 0 Parent=GSCOCT00011264001 | |
| 52672 chr10 manual_curation CDS 27274434 27274556 . + 0 Parent=GSCOCT00011264001 | |
| 52673 chr10 manual_curation CDS 27274693 27274895 . + 0 Parent=GSCOCT00011264001 | |
| 52674 chr10 manual_curation CDS 27275014 27275425 . + 2 Parent=GSCOCT00011264001 | |
| 52675 chr10 manual_curation gene 27277470 27290726 . - . ID=GSCOCG00011266001;Name=Cc10_g16340 | |
| 52676 chr10 manual_curation mRNA 27277470 27290726 . - . ID=GSCOCT00011266001;Parent=GSCOCG00011266001;Name=Cc10_g16340 | |
| 52677 chr10 manual_curation polypeptide 27277470 27290428 . - . ID=GSCOCP00011266001;Dbxref=GENE3D:G3DSA:1.25.10.10,InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR011009,InterPro:IPR011989,InterPro:IPR016024,InterPro:IPR017442,PFAM:PF00069,PROFILE:PS50011,SMART:SM00220,SUPERFAMILY:SSF48371,SUPERFAMILY:SSF56112,SwissProt:Q6P3W7,SwissProt:Q8CFE4,SwissProt:Q9P7X5,TAIR:AT1G22870.1,TAIR:AT1G71410.1,TAIR:AT2G40730.1,TrEMBL:B9MWK5,TrEMBL:D7SN24,TrEMBL:I1LVI0;Derives_from=GSCOCT00011266001;Name=Cc10_g16340;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005488,GO:0005524,GO:0006468,CC_EC_number:2.7.11.1,PRODUCT:Protein kinase family protein with ARM repeat domain,CC_functional_completeness:complete,CC_gene:Scyl2,CC_gene:SCYL2,CC_gene:ppk32;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011266001~ Protein kinase family protein with ARM repeat domain~ Scyl2~ complete;original_location=complement(join(24139..24627%2C22110..22214%2C21003..21113%2C19259..19441%2C18811..18937%2C18299..18360%2C18096..18182%2C17568..17654%2C16370..16483%2C14575..14703%2C13858..13920%2C13040..13201%2C12839..12957%2C11669..12626));owner=coffea | |
| 52678 chr10 manual_curation exon 27277470 27278427 . - . Parent=GSCOCT00011266001 | |
| 52679 chr10 manual_curation exon 27278640 27278758 . - . Parent=GSCOCT00011266001 | |
| 52680 chr10 manual_curation exon 27278841 27279002 . - . Parent=GSCOCT00011266001 | |
| 52681 chr10 manual_curation exon 27279659 27279721 . - . Parent=GSCOCT00011266001 | |
| 52682 chr10 manual_curation exon 27280376 27280504 . - . Parent=GSCOCT00011266001 | |
| 52683 chr10 manual_curation exon 27282171 27282284 . - . Parent=GSCOCT00011266001 | |
| 52684 chr10 manual_curation exon 27283369 27283455 . - . Parent=GSCOCT00011266001 | |
| 52685 chr10 manual_curation exon 27283897 27283983 . - . Parent=GSCOCT00011266001 | |
| 52686 chr10 manual_curation exon 27284100 27284161 . - . Parent=GSCOCT00011266001 | |
| 52687 chr10 manual_curation exon 27284612 27284738 . - . Parent=GSCOCT00011266001 | |
| 52688 chr10 manual_curation exon 27285060 27285242 . - . Parent=GSCOCT00011266001 | |
| 52689 chr10 manual_curation exon 27286804 27286914 . - . Parent=GSCOCT00011266001 | |
| 52690 chr10 manual_curation exon 27287911 27288015 . - . Parent=GSCOCT00011266001 | |
| 52691 chr10 manual_curation exon 27289940 27290726 . - . Parent=GSCOCT00011266001 | |
| 52692 chr10 manual_curation CDS 27277470 27278427 . - 2 Parent=GSCOCT00011266001 | |
| 52693 chr10 manual_curation CDS 27278640 27278758 . - 0 Parent=GSCOCT00011266001 | |
| 52694 chr10 manual_curation CDS 27278841 27279002 . - 0 Parent=GSCOCT00011266001 | |
| 52695 chr10 manual_curation CDS 27279659 27279721 . - 0 Parent=GSCOCT00011266001 | |
| 52696 chr10 manual_curation CDS 27280376 27280504 . - 0 Parent=GSCOCT00011266001 | |
| 52697 chr10 manual_curation CDS 27282171 27282284 . - 0 Parent=GSCOCT00011266001 | |
| 52698 chr10 manual_curation CDS 27283369 27283455 . - 0 Parent=GSCOCT00011266001 | |
| 52699 chr10 manual_curation CDS 27283897 27283983 . - 0 Parent=GSCOCT00011266001 | |
| 52700 chr10 manual_curation CDS 27284100 27284161 . - 1 Parent=GSCOCT00011266001 | |
| 52701 chr10 manual_curation CDS 27284612 27284738 . - 0 Parent=GSCOCT00011266001 | |
| 52702 chr10 manual_curation CDS 27285060 27285242 . - 0 Parent=GSCOCT00011266001 | |
| 52703 chr10 manual_curation CDS 27286804 27286914 . - 0 Parent=GSCOCT00011266001 | |
| 52704 chr10 manual_curation CDS 27287911 27288015 . - 0 Parent=GSCOCT00011266001 | |
| 52705 chr10 manual_curation CDS 27289940 27290428 . - 0 Parent=GSCOCT00011266001 | |
| 52706 chr10 manual_curation gene 27302930 27304607 . + . ID=GSCOCG00011267001;Name=Cc10_g16350 | |
| 52707 chr10 manual_curation mRNA 27302930 27304607 . + . ID=GSCOCT00011267001;Parent=GSCOCG00011267001;Name=Cc10_g16350 | |
| 52708 chr10 manual_curation polypeptide 27302930 27304375 . + . ID=GSCOCP00011267001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SMART:SM00369,SwissProt:C0LGQ5,SwissProt:Q00874,SwissProt:Q9C9H7,TAIR:AT1G33590.1,TAIR:AT1G33600.1,TAIR:AT2G26380.1,TrEMBL:D7KJ86,TrEMBL:E4MWE4,TrEMBL:F6GW31;Derives_from=GSCOCT00011267001;Name=Cc10_g16350;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative DNA-damage-repair/toleration protein DRT100,CC_functional_completeness:complete,CC_gene:DRT100,CC_gene:GSO1,CC_gene:RLP12;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011267001~ Putative DNA-damage-repair/toleration protein DRT100~ DRT100~ complete;original_location=37129..38574;owner=coffea | |
| 52709 chr10 manual_curation exon 27302930 27304607 . + . Parent=GSCOCT00011267001 | |
| 52710 chr10 manual_curation CDS 27302930 27304375 . + 0 Parent=GSCOCT00011267001 | |
| 52711 chr10 manual_curation gene 27304755 27306545 . - . ID=GSCOCG00011268001;Name=Cc10_g16360 | |
| 52712 chr10 manual_curation mRNA 27304755 27306545 . - . ID=GSCOCT00011268001;Parent=GSCOCG00011268001;Name=Cc10_g16360 | |
| 52713 chr10 manual_curation polypeptide 27304988 27306382 . - . ID=GSCOCP00011268001;Dbxref=TAIR:AT3G56360.1,TAIR:AT5G05250.1,TrEMBL:B4FAT7,TrEMBL:C5X1C3,TrEMBL:F2DHN4;Derives_from=GSCOCT00011268001;Name=Cc10_g16360;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011268001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(40183..40581%2C39187..39630));owner=coffea | |
| 52714 chr10 manual_curation exon 27304755 27305431 . - . Parent=GSCOCT00011268001 | |
| 52715 chr10 manual_curation exon 27305984 27306545 . - . Parent=GSCOCT00011268001 | |
| 52716 chr10 manual_curation CDS 27304988 27305431 . - 0 Parent=GSCOCT00011268001 | |
| 52717 chr10 manual_curation CDS 27305984 27306382 . - 0 Parent=GSCOCT00011268001 | |
| 52718 chr10 manual_curation gene 27310071 27311528 . - . ID=GSCOCG00011269001;Name=Cc10_g16370 | |
| 52719 chr10 manual_curation mRNA 27310071 27311528 . - . ID=GSCOCT00011269001;Parent=GSCOCG00011269001;Name=Cc10_g16370 | |
| 52720 chr10 manual_curation polypeptide 27310231 27311528 . - . ID=GSCOCP00011269001;Dbxref=TAIR:AT5G14105.1,TrEMBL:A5BJD8,TrEMBL:B9SPY6,TrEMBL:I1N7U0;Derives_from=GSCOCT00011269001;Name=Cc10_g16370;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B Has 30201 Blast hits to 17322 proteins in 780 species,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011269001~ unknown protein%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(45576..45727%2C44430..44496));owner=coffea | |
| 52721 chr10 manual_curation exon 27310071 27310297 . - . Parent=GSCOCT00011269001 | |
| 52722 chr10 manual_curation exon 27311377 27311528 . - . Parent=GSCOCT00011269001 | |
| 52723 chr10 manual_curation CDS 27310231 27310297 . - 2 Parent=GSCOCT00011269001 | |
| 52724 chr10 manual_curation CDS 27311377 27311528 . - 0 Parent=GSCOCT00011269001 | |
| 52725 chr10 manual_curation gene 27311589 27312826 . - . ID=GSCOCG00011270001;Name=Cc10_g16380 | |
| 52726 chr10 manual_curation mRNA 27311589 27312826 . - . ID=GSCOCT00011270001;Parent=GSCOCG00011270001;Name=Cc10_g16380 | |
| 52727 chr10 manual_curation polypeptide 27311589 27312826 . - . ID=GSCOCP00011270001;Derives_from=GSCOCT00011270001;Name=Cc10_g16380;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00011270001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(46935..47025%2C45788..45795));owner=coffea | |
| 52728 chr10 manual_curation exon 27311589 27311596 . - . Parent=GSCOCT00011270001 | |
| 52729 chr10 manual_curation exon 27312736 27312826 . - . Parent=GSCOCT00011270001 | |
| 52730 chr10 manual_curation CDS 27311589 27311596 . - 1 Parent=GSCOCT00011270001 | |
| 52731 chr10 manual_curation CDS 27312736 27312826 . - 0 Parent=GSCOCT00011270001 | |
| 52732 chr10 manual_curation gene 27315641 27315901 . - . ID=GSCOCG00001621001;Name=Cc10_g16390 | |
| 52733 chr10 manual_curation mRNA 27315641 27315901 . - . ID=GSCOCT00001621001;Parent=GSCOCG00001621001;Name=Cc10_g16390 | |
| 52734 chr10 manual_curation polypeptide 27315641 27315901 . - . ID=GSCOCP00001621001;Dbxref=SwissProt:Q9FNP2,SwissProt:Q9FVV1,SwissProt:Q9SF78,TAIR:AT1G71250.1,TAIR:AT1G71691.2,TAIR:AT5G08460.1,TrEMBL:B9RW96,TrEMBL:B9S6J2,TrEMBL:B9TMJ4;Derives_from=GSCOCT00001621001;Name=Cc10_g16390;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:GDSL esterase/lipase At1g71250,CC_functional_completeness:fragment,CC_gene:At1g71250,CC_gene:At5g08460,CC_gene:At1g71691;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001621001~ GDSL esterase/lipase At1g71250~ At1g71250~ fragment;original_location=complement(2293..2553);owner=coffea | |
| 52735 chr10 manual_curation exon 27315641 27315901 . - . Parent=GSCOCT00001621001 | |
| 52736 chr10 manual_curation CDS 27315641 27315901 . - 0 Parent=GSCOCT00001621001 | |
| 52737 chr10 manual_curation gene 27317562 27325149 . - . ID=GSCOCG00013396001;Name=Cc10_g16400 | |
| 52738 chr10 manual_curation mRNA 27317562 27325149 . - . ID=GSCOCT00013396001;Parent=GSCOCG00013396001;Name=Cc10_g16400 | |
| 52739 chr10 manual_curation polypeptide 27318156 27324662 . - . ID=GSCOCP00013396001;Dbxref=GENE3D:G3DSA:3.30.470.20,GENE3D:G3DSA:3.40.50.20,InterPro:IPR005479,InterPro:IPR005480,InterPro:IPR005481,InterPro:IPR005483,InterPro:IPR006275,InterPro:IPR011607,InterPro:IPR011761,InterPro:IPR013816,InterPro:IPR013817,InterPro:IPR016185,PFAM:PF00289,PFAM:PF02142,PFAM:PF02786,PFAM:PF02787,PRINTS:PR00098,PROFILE:PS50975,PROSITE:PS00866,PROSITE:PS00867,SMART:SM00851,SUPERFAMILY:SSF48108,SUPERFAMILY:SSF52440,SwissProt:O28994,SwissProt:Q55756,SwissProt:Q8YQL2,TAIR:AT1G29900.1,TIGRFAMs:TIGR01369,TrEMBL:A5B6E2,TrEMBL:F6GTX9,TrEMBL:Q8L6J9;Derives_from=GSCOCT00013396001;Name=Cc10_g16400;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004086,GO:0005524,GO:0006807,GO:0008152,CC_EC_number:6.3.4.16,PRODUCT:Carbamoyl-phosphate synthase large chain,CC_functional_completeness:complete,CC_gene:carB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013396001~ Carbamoyl-phosphate synthase large chain~ carB~ complete;original_location=complement(join(7190..8569%2C4587..5279%2C2063..3622));owner=coffea | |
| 52740 chr10 manual_curation exon 27324812 27325149 . - . Parent=GSCOCT00013396001 | |
| 52741 chr10 manual_curation exon 27317562 27319715 . - . Parent=GSCOCT00013396001 | |
| 52742 chr10 manual_curation exon 27320680 27321372 . - . Parent=GSCOCT00013396001 | |
| 52743 chr10 manual_curation exon 27323283 27324719 . - . Parent=GSCOCT00013396001 | |
| 52744 chr10 manual_curation CDS 27318156 27319715 . - 0 Parent=GSCOCT00013396001 | |
| 52745 chr10 manual_curation CDS 27320680 27321372 . - 0 Parent=GSCOCT00013396001 | |
| 52746 chr10 manual_curation CDS 27323283 27324662 . - 0 Parent=GSCOCT00013396001 | |
| 52747 chr10 manual_curation gene 27329619 27335901 . + . ID=GSCOCG00013397001;Name=Cc10_g16410 | |
| 52748 chr10 manual_curation mRNA 27329619 27335901 . + . ID=GSCOCT00013397001;Parent=GSCOCG00013397001;Name=Cc10_g16410 | |
| 52749 chr10 manual_curation polypeptide 27329867 27335154 . + . ID=GSCOCP00013397001;Dbxref=TAIR:AT1G33810.1,TrEMBL:A9JPD0,TrEMBL:C6T1S3,TrEMBL:D7U904;Derives_from=GSCOCT00013397001;Name=Cc10_g16410;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013397001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast thylakoid membrane%2C chloroplast%2C chloroplast envelope%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B Has 39 Blast hits to 39 proteins in 18 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 39%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ fragment;original_location=join(13774..13815%2C17642..17756%2C18988..19061);owner=coffea | |
| 52750 chr10 manual_curation exon 27329619 27329908 . + . Parent=GSCOCT00013397001 | |
| 52751 chr10 manual_curation exon 27333735 27333849 . + . Parent=GSCOCT00013397001 | |
| 52752 chr10 manual_curation exon 27335081 27335901 . + . Parent=GSCOCT00013397001 | |
| 52753 chr10 manual_curation CDS 27329867 27329908 . + 0 Parent=GSCOCT00013397001 | |
| 52754 chr10 manual_curation CDS 27333735 27333849 . + 0 Parent=GSCOCT00013397001 | |
| 52755 chr10 manual_curation CDS 27335081 27335154 . + 1 Parent=GSCOCT00013397001 | |
| 52756 chr10 manual_curation gene 27335981 27337982 . - . ID=GSCOCG00013398001;Name=Cc10_g16420 | |
| 52757 chr10 manual_curation mRNA 27335981 27337982 . - . ID=GSCOCT00013398001;Parent=GSCOCG00013398001;Name=Cc10_g16420 | |
| 52758 chr10 manual_curation polypeptide 27335981 27337982 . - . ID=GSCOCP00013398001;Dbxref=InterPro:IPR002482,InterPro:IPR018392,PFAM:PF01476,SMART:SM00257,TrEMBL:B9MWH0,TrEMBL:B9SK82,TrEMBL:F6I444;Derives_from=GSCOCT00013398001;Name=Cc10_g16420;Ontology_term=CC_evidence_code:ISS,GO:0016998,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013398001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=complement(join(21770..21889%2C21586..21656%2C21337..21427%2C20982..21050%2C20312..20437%2C19888..20121));owner=coffea | |
| 52759 chr10 manual_curation exon 27335981 27336214 . - . Parent=GSCOCT00013398001 | |
| 52760 chr10 manual_curation exon 27336405 27336530 . - . Parent=GSCOCT00013398001 | |
| 52761 chr10 manual_curation exon 27337075 27337143 . - . Parent=GSCOCT00013398001 | |
| 52762 chr10 manual_curation exon 27337430 27337520 . - . Parent=GSCOCT00013398001 | |
| 52763 chr10 manual_curation exon 27337679 27337749 . - . Parent=GSCOCT00013398001 | |
| 52764 chr10 manual_curation exon 27337863 27337982 . - . Parent=GSCOCT00013398001 | |
| 52765 chr10 manual_curation CDS 27335981 27336214 . - 0 Parent=GSCOCT00013398001 | |
| 52766 chr10 manual_curation CDS 27336405 27336530 . - 0 Parent=GSCOCT00013398001 | |
| 52767 chr10 manual_curation CDS 27337075 27337143 . - 0 Parent=GSCOCT00013398001 | |
| 52768 chr10 manual_curation CDS 27337430 27337520 . - 2 Parent=GSCOCT00013398001 | |
| 52769 chr10 manual_curation CDS 27337679 27337749 . - 0 Parent=GSCOCT00013398001 | |
| 52770 chr10 manual_curation CDS 27337863 27337982 . - 0 Parent=GSCOCT00013398001 | |
| 52771 chr10 manual_curation gene 27453673 27456337 . + . ID=GSCOCG00013405001;Name=Cc10_g16430 | |
| 52772 chr10 manual_curation mRNA 27453673 27456337 . + . ID=GSCOCT00013405001;Parent=GSCOCG00013405001;Name=Cc10_g16430 | |
| 52773 chr10 manual_curation polypeptide 27453810 27456278 . + . ID=GSCOCP00013405001;Dbxref=InterPro:IPR001087,PFAM:PF00657,SwissProt:Q8L5Z1,SwissProt:Q93YW8,SwissProt:Q9FK75,TAIR:AT1G33811.1,TAIR:AT4G18970.2,TAIR:AT5G45670.1,TrEMBL:B9SK92,TrEMBL:D7U910,TrEMBL:I1KFY5;Derives_from=GSCOCT00013405001;Name=Cc10_g16430;Ontology_term=CC_evidence_code:ISS,GO:0006629,CC_EC_number:missing_EC_number,PRODUCT:GDSL esterase/lipase At1g33811,CC_functional_completeness:complete,CC_gene:At1g33811,CC_gene:At4g18970,CC_gene:At5g45670;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013405001~ GDSL esterase/lipase At1g33811~ At1g33811~ complete;original_location=join(137717..137792%2C138120..138244%2C138522..138770%2C139408..139666%2C139962..140185);owner=coffea | |
| 52774 chr10 manual_curation exon 27453673 27453885 . + . Parent=GSCOCT00013405001 | |
| 52775 chr10 manual_curation exon 27454213 27454337 . + . Parent=GSCOCT00013405001 | |
| 52776 chr10 manual_curation exon 27454615 27454863 . + . Parent=GSCOCT00013405001 | |
| 52777 chr10 manual_curation exon 27455501 27455759 . + . Parent=GSCOCT00013405001 | |
| 52778 chr10 manual_curation exon 27456055 27456337 . + . Parent=GSCOCT00013405001 | |
| 52779 chr10 manual_curation CDS 27453810 27453885 . + 0 Parent=GSCOCT00013405001 | |
| 52780 chr10 manual_curation CDS 27454213 27454337 . + 1 Parent=GSCOCT00013405001 | |
| 52781 chr10 manual_curation CDS 27454615 27454863 . + 0 Parent=GSCOCT00013405001 | |
| 52782 chr10 manual_curation CDS 27455501 27455759 . + 0 Parent=GSCOCT00013405001 | |
| 52783 chr10 manual_curation CDS 27456055 27456278 . + 1 Parent=GSCOCT00013405001 | |
| 52784 chr10 manual_curation gene 27458303 27460691 . - . ID=GSCOCG00013406001;Name=Cc10_g16440 | |
| 52785 chr10 manual_curation mRNA 27458303 27460691 . - . ID=GSCOCT00013406001;Parent=GSCOCG00013406001;Name=Cc10_g16440 | |
| 52786 chr10 manual_curation polypeptide 27458489 27460691 . - . ID=GSCOCP00013406001;Dbxref=InterPro:IPR001087,PFAM:PF00657,SwissProt:Q93YW8,SwissProt:Q9FK75,SwissProt:Q9SF78,TAIR:AT1G29670.1,TAIR:AT1G71691.2,TAIR:AT5G45670.1,TrEMBL:B9IQC8,TrEMBL:I1JZD2,TrEMBL:I1KFY6;Derives_from=GSCOCT00013406001;Name=Cc10_g16440;Ontology_term=CC_evidence_code:ISS,GO:0006629,CC_EC_number:missing_EC_number,PRODUCT:GDSL esterase/lipase At1g71691,CC_functional_completeness:complete,CC_gene:At1g71691,CC_gene:At5g45670,CC_gene:At4g18970;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013406001~ GDSL esterase/lipase At1g71691~ At1g71691~ complete;original_location=complement(join(144448..144598%2C143461..143582%2C143094..143333%2C142757..143006%2C142396..142616));owner=coffea | |
| 52787 chr10 manual_curation exon 27458303 27458709 . - . Parent=GSCOCT00013406001 | |
| 52788 chr10 manual_curation exon 27458850 27459099 . - . Parent=GSCOCT00013406001 | |
| 52789 chr10 manual_curation exon 27459187 27459426 . - . Parent=GSCOCT00013406001 | |
| 52790 chr10 manual_curation exon 27459554 27459675 . - . Parent=GSCOCT00013406001 | |
| 52791 chr10 manual_curation exon 27460541 27460691 . - . Parent=GSCOCT00013406001 | |
| 52792 chr10 manual_curation CDS 27458489 27458709 . - 1 Parent=GSCOCT00013406001 | |
| 52793 chr10 manual_curation CDS 27458850 27459099 . - 0 Parent=GSCOCT00013406001 | |
| 52794 chr10 manual_curation CDS 27459187 27459426 . - 0 Parent=GSCOCT00013406001 | |
| 52795 chr10 manual_curation CDS 27459554 27459675 . - 1 Parent=GSCOCT00013406001 | |
| 52796 chr10 manual_curation CDS 27460541 27460691 . - 0 Parent=GSCOCT00013406001 | |
| 52797 chr10 manual_curation gene 27460796 27461110 . + . ID=GSCOCG00013407001;Name=Cc10_g16450 | |
| 52798 chr10 manual_curation mRNA 27460796 27461110 . + . ID=GSCOCT00013407001;Parent=GSCOCG00013407001;Name=Cc10_g16450 | |
| 52799 chr10 manual_curation polypeptide 27460976 27461110 . + . ID=GSCOCP00013407001;Derives_from=GSCOCT00013407001;Name=Cc10_g16450;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013407001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=144883..145017;owner=coffea | |
| 52800 chr10 manual_curation exon 27460796 27461110 . + . Parent=GSCOCT00013407001 | |
| 52801 chr10 manual_curation CDS 27460976 27461110 . + 0 Parent=GSCOCT00013407001 | |
| 52802 chr10 manual_curation gene 27463905 27478421 . - . ID=GSCOCG00013408001;Name=Cc10_g16460 | |
| 52803 chr10 manual_curation mRNA 27463905 27478421 . - . ID=GSCOCT00013408001;Parent=GSCOCG00013408001;Name=Cc10_g16460 | |
| 52804 chr10 manual_curation polypeptide 27464165 27478397 . - . ID=GSCOCP00013408001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR006594,InterPro:IPR006595,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019775,InterPro:IPR019781,InterPro:IPR019782,InterPro:IPR020472,PFAM:PF00400,PRINTS:PR00320,PROFILE:PS50082,PROFILE:PS50294,PROFILE:PS50896,PROFILE:PS50897,PROSITE:PS00678,SMART:SM00320,SMART:SM00667,SMART:SM00668,SUPERFAMILY:SSF50978,SwissProt:Q2TAY7,SwissProt:Q3UKJ7,SwissProt:Q5ZME8,TAIR:AT1G73720.1,TAIR:AT3G49660.1,TAIR:AT4G02730.1,TrEMBL:D7SHM1,TrEMBL:I1KSS9,TrEMBL:Q94IP9;Derives_from=GSCOCT00013408001;Name=Cc10_g16460;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.7.11.7,PRODUCT:WD40 repeat-containing protein SMU1,CC_functional_completeness:complete,CC_gene:SMU1,CC_gene:Smu1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013408001~ WD40 repeat-containing protein SMU1~ SMU1~ complete;original_location=complement(join(162273..162304%2C159730..159940%2C158600..158752%2C157132..157180%2C156441..156524%2C155592..155695%2C154481..154567%2C154355..154408%2C153022..153117%2C152050..152177%2C151756..151882%2C151604..151663%2C151319..151426%2C150478..150578%2C148356..148407%2C148072..148170));owner=coffea | |
| 52805 chr10 manual_curation exon 27463905 27464263 . - . Parent=GSCOCT00013408001 | |
| 52806 chr10 manual_curation exon 27464449 27464500 . - . Parent=GSCOCT00013408001 | |
| 52807 chr10 manual_curation exon 27466571 27466671 . - . Parent=GSCOCT00013408001 | |
| 52808 chr10 manual_curation exon 27467412 27467519 . - . Parent=GSCOCT00013408001 | |
| 52809 chr10 manual_curation exon 27467697 27467756 . - . Parent=GSCOCT00013408001 | |
| 52810 chr10 manual_curation exon 27467849 27467975 . - . Parent=GSCOCT00013408001 | |
| 52811 chr10 manual_curation exon 27468143 27468270 . - . Parent=GSCOCT00013408001 | |
| 52812 chr10 manual_curation exon 27469115 27469210 . - . Parent=GSCOCT00013408001 | |
| 52813 chr10 manual_curation exon 27470448 27470501 . - . Parent=GSCOCT00013408001 | |
| 52814 chr10 manual_curation exon 27470574 27470660 . - . Parent=GSCOCT00013408001 | |
| 52815 chr10 manual_curation exon 27471685 27471788 . - . Parent=GSCOCT00013408001 | |
| 52816 chr10 manual_curation exon 27472534 27472617 . - . Parent=GSCOCT00013408001 | |
| 52817 chr10 manual_curation exon 27473225 27473273 . - . Parent=GSCOCT00013408001 | |
| 52818 chr10 manual_curation exon 27474693 27474845 . - . Parent=GSCOCT00013408001 | |
| 52819 chr10 manual_curation exon 27475823 27476033 . - . Parent=GSCOCT00013408001 | |
| 52820 chr10 manual_curation exon 27478366 27478421 . - . Parent=GSCOCT00013408001 | |
| 52821 chr10 manual_curation CDS 27464165 27464263 . - 0 Parent=GSCOCT00013408001 | |
| 52822 chr10 manual_curation CDS 27464449 27464500 . - 2 Parent=GSCOCT00013408001 | |
| 52823 chr10 manual_curation CDS 27466571 27466671 . - 0 Parent=GSCOCT00013408001 | |
| 52824 chr10 manual_curation CDS 27467412 27467519 . - 0 Parent=GSCOCT00013408001 | |
| 52825 chr10 manual_curation CDS 27467697 27467756 . - 0 Parent=GSCOCT00013408001 | |
| 52826 chr10 manual_curation CDS 27467849 27467975 . - 2 Parent=GSCOCT00013408001 | |
| 52827 chr10 manual_curation CDS 27468143 27468270 . - 0 Parent=GSCOCT00013408001 | |
| 52828 chr10 manual_curation CDS 27469115 27469210 . - 0 Parent=GSCOCT00013408001 | |
| 52829 chr10 manual_curation CDS 27470448 27470501 . - 0 Parent=GSCOCT00013408001 | |
| 52830 chr10 manual_curation CDS 27470574 27470660 . - 0 Parent=GSCOCT00013408001 | |
| 52831 chr10 manual_curation CDS 27471685 27471788 . - 1 Parent=GSCOCT00013408001 | |
| 52832 chr10 manual_curation CDS 27472534 27472617 . - 1 Parent=GSCOCT00013408001 | |
| 52833 chr10 manual_curation CDS 27473225 27473273 . - 0 Parent=GSCOCT00013408001 | |
| 52834 chr10 manual_curation CDS 27474693 27474845 . - 0 Parent=GSCOCT00013408001 | |
| 52835 chr10 manual_curation CDS 27475823 27476033 . - 2 Parent=GSCOCT00013408001 | |
| 52836 chr10 manual_curation CDS 27478366 27478397 . - 0 Parent=GSCOCT00013408001 | |
| 52837 chr10 manual_curation gene 27485551 27488534 . - . ID=GSCOCG00013409001;Name=Cc10_g16470 | |
| 52838 chr10 manual_curation mRNA 27485551 27488534 . - . ID=GSCOCT00013409001;Parent=GSCOCG00013409001;Name=Cc10_g16470 | |
| 52839 chr10 manual_curation polypeptide 27485551 27488534 . - . ID=GSCOCP00013409001;Dbxref=InterPro:IPR002100,InterPro:IPR002487,PFAM:PF00319,PFAM:PF01486,PRINTS:PR00404,PROFILE:PS50066,PROFILE:PS51297,PROSITE:PS00350,SMART:SM00432,SUPERFAMILY:SSF55455,SwissProt:A2YQK9,SwissProt:Q0J8G8,SwissProt:Q38841,TAIR:AT1G71692.1,TAIR:AT2G45660.1,TAIR:AT4G09960.3,TrEMBL:B9MWG7,TrEMBL:D7U912,TrEMBL:Q8H279;Derives_from=GSCOCT00013409001;Name=Cc10_g16470;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0005634,GO:0043565,CC_EC_number:missing_EC_number,PRODUCT:Agamous-like MADS-box protein AGL12,CC_functional_completeness:fragment,CC_gene:AGL12,CC_gene:MADS26;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013409001~ Agamous-like MADS-box protein AGL12~ AGL12~ fragment;original_location=complement(join(172260..172441%2C171716..171800%2C170318..170379%2C169652..169751%2C169458..169541));owner=coffea | |
| 52840 chr10 manual_curation exon 27485551 27485634 . - . Parent=GSCOCT00013409001 | |
| 52841 chr10 manual_curation exon 27485745 27485844 . - . Parent=GSCOCT00013409001 | |
| 52842 chr10 manual_curation exon 27486411 27486472 . - . Parent=GSCOCT00013409001 | |
| 52843 chr10 manual_curation exon 27487809 27487893 . - . Parent=GSCOCT00013409001 | |
| 52844 chr10 manual_curation exon 27488353 27488534 . - . Parent=GSCOCT00013409001 | |
| 52845 chr10 manual_curation CDS 27485551 27485634 . - 0 Parent=GSCOCT00013409001 | |
| 52846 chr10 manual_curation CDS 27485745 27485844 . - 2 Parent=GSCOCT00013409001 | |
| 52847 chr10 manual_curation CDS 27486411 27486472 . - 0 Parent=GSCOCT00013409001 | |
| 52848 chr10 manual_curation CDS 27487809 27487893 . - 2 Parent=GSCOCT00013409001 | |
| 52849 chr10 manual_curation CDS 27488353 27488534 . - 0 Parent=GSCOCT00013409001 | |
| 52850 chr10 manual_curation gene 27514663 27520252 . + . ID=GSCOCG00013410001;Name=Cc10_g16480 | |
| 52851 chr10 manual_curation mRNA 27514663 27520252 . + . ID=GSCOCT00013410001;Parent=GSCOCG00013410001;Name=Cc10_g16480 | |
| 52852 chr10 manual_curation polypeptide 27514775 27520139 . + . ID=GSCOCP00013410001;Dbxref=TAIR:AT1G17030.1,TAIR:AT2G47010.1,TAIR:AT4G09965.1,TrEMBL:A9PF28,TrEMBL:B9SLD3,TrEMBL:D7U915;Derives_from=GSCOCT00013410001;Name=Cc10_g16480;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013410001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 17 plant structures%3B EXPRESSED DURING: 10 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17030.1)%3B Has 72 Blast hits to 72 proteins in 13 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 71%3B Viruses - 0%3B Other Eukaryotes - 1 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(198682..198970%2C201434..202062%2C202348..202863%2C203888..204046);owner=coffea | |
| 52853 chr10 manual_curation exon 27514663 27515063 . + . Parent=GSCOCT00013410001 | |
| 52854 chr10 manual_curation exon 27517527 27518155 . + . Parent=GSCOCT00013410001 | |
| 52855 chr10 manual_curation exon 27518441 27518956 . + . Parent=GSCOCT00013410001 | |
| 52856 chr10 manual_curation exon 27519981 27520252 . + . Parent=GSCOCT00013410001 | |
| 52857 chr10 manual_curation CDS 27514775 27515063 . + 0 Parent=GSCOCT00013410001 | |
| 52858 chr10 manual_curation CDS 27517527 27518155 . + 1 Parent=GSCOCT00013410001 | |
| 52859 chr10 manual_curation CDS 27518441 27518956 . + 0 Parent=GSCOCT00013410001 | |
| 52860 chr10 manual_curation CDS 27519981 27520139 . + 0 Parent=GSCOCT00013410001 | |
| 52861 chr10 manual_curation gene 27520511 27522225 . - . ID=GSCOCG00013411001;Name=Cc10_g16490 | |
| 52862 chr10 manual_curation mRNA 27520511 27522225 . - . ID=GSCOCT00013411001;Parent=GSCOCG00013411001;Name=Cc10_g16490 | |
| 52863 chr10 manual_curation polypeptide 27520511 27522225 . - . ID=GSCOCP00013411001;Dbxref=GENE3D:G3DSA:3.20.20.70,InterPro:IPR001155,InterPro:IPR013785,PFAM:PF00724,SwissProt:B9FSC8,SwissProt:Q8GYB8,SwissProt:Q8LAH7,TAIR:AT1G09400.1,TAIR:AT1G76680.2,TAIR:AT1G76690.1,TrEMBL:F6I447,TrEMBL:F6I449,TrEMBL:Q76DL0;Derives_from=GSCOCT00013411001;Name=Cc10_g16490;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,GO:0010181,GO:0016491,CC_EC_number:1.3.1.42,PRODUCT:12-oxophytodienoate reductase 2,CC_functional_completeness:complete,CC_gene:OPR2,CC_gene:OPR1,CC_gene:OPR11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013411001~ 12-oxophytodienoate reductase 2~ OPR2~ complete;original_location=complement(join(206032..206132%2C205771..205911%2C205476..205666%2C205203..205376%2C204418..205010));owner=coffea | |
| 52864 chr10 manual_curation exon 27520511 27521103 . - . Parent=GSCOCT00013411001 | |
| 52865 chr10 manual_curation exon 27521296 27521469 . - . Parent=GSCOCT00013411001 | |
| 52866 chr10 manual_curation exon 27521569 27521759 . - . Parent=GSCOCT00013411001 | |
| 52867 chr10 manual_curation exon 27521864 27522004 . - . Parent=GSCOCT00013411001 | |
| 52868 chr10 manual_curation exon 27522125 27522225 . - . Parent=GSCOCT00013411001 | |
| 52869 chr10 manual_curation CDS 27520511 27521103 . - 1 Parent=GSCOCT00013411001 | |
| 52870 chr10 manual_curation CDS 27521296 27521469 . - 1 Parent=GSCOCT00013411001 | |
| 52871 chr10 manual_curation CDS 27521569 27521759 . - 2 Parent=GSCOCT00013411001 | |
| 52872 chr10 manual_curation CDS 27521864 27522004 . - 2 Parent=GSCOCT00013411001 | |
| 52873 chr10 manual_curation CDS 27522125 27522225 . - 0 Parent=GSCOCT00013411001 | |
| 52874 chr10 manual_curation gene 27570566 27574010 . - . ID=GSCOCG00013413001;Name=Cc10_g16500 | |
| 52875 chr10 manual_curation mRNA 27570566 27574010 . - . ID=GSCOCT00013413001;Parent=GSCOCG00013413001;Name=Cc10_g16500 | |
| 52876 chr10 manual_curation polypeptide 27570566 27573925 . - . ID=GSCOCP00013413001;Dbxref=GENE3D:G3DSA:3.20.20.70,InterPro:IPR001155,InterPro:IPR013785,PFAM:PF00724,SwissProt:B9FSC8,SwissProt:Q8GYB8,SwissProt:Q9XG54,TAIR:AT1G09400.1,TAIR:AT1G76680.2,TAIR:AT1G76690.1,TrEMBL:A5AVR2,TrEMBL:B9MWG6,TrEMBL:F6I447;Derives_from=GSCOCT00013413001;Name=Cc10_g16500;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,GO:0010181,GO:0016491,CC_EC_number:1.3.1.42,PRODUCT:Putative 12-oxophytodienoate reductase 11,CC_functional_completeness:complete,CC_gene:OPR11,CC_gene:OPR1,CC_gene:OPR2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013413001~ Putative 12-oxophytodienoate reductase 11~ OPR11~ complete;original_location=complement(join(257735..257832%2C256232..256372%2C255987..256117%2C255489..255665%2C254473..255065));owner=coffea | |
| 52877 chr10 manual_curation exon 27570566 27571158 . - . Parent=GSCOCT00013413001 | |
| 52878 chr10 manual_curation exon 27571582 27571758 . - . Parent=GSCOCT00013413001 | |
| 52879 chr10 manual_curation exon 27572080 27572210 . - . Parent=GSCOCT00013413001 | |
| 52880 chr10 manual_curation exon 27572325 27572465 . - . Parent=GSCOCT00013413001 | |
| 52881 chr10 manual_curation exon 27573828 27574010 . - . Parent=GSCOCT00013413001 | |
| 52882 chr10 manual_curation CDS 27570566 27571158 . - 1 Parent=GSCOCT00013413001 | |
| 52883 chr10 manual_curation CDS 27571582 27571758 . - 1 Parent=GSCOCT00013413001 | |
| 52884 chr10 manual_curation CDS 27572080 27572210 . - 2 Parent=GSCOCT00013413001 | |
| 52885 chr10 manual_curation CDS 27572325 27572465 . - 2 Parent=GSCOCT00013413001 | |
| 52886 chr10 manual_curation CDS 27573828 27573925 . - 0 Parent=GSCOCT00013413001 | |
| 52887 chr10 manual_curation gene 27575962 27576354 . - . ID=GSCOCG00013414001;Name=Cc10_g16510 | |
| 52888 chr10 manual_curation mRNA 27575962 27576354 . - . ID=GSCOCT00013414001;Parent=GSCOCG00013414001;Name=Cc10_g16510 | |
| 52889 chr10 manual_curation polypeptide 27575962 27576354 . - . ID=GSCOCP00013414001;Dbxref=GENE3D:G3DSA:3.20.20.70,InterPro:IPR001155,InterPro:IPR013785,PFAM:PF00724,SwissProt:Q8GYB8,SwissProt:Q8LAH7,SwissProt:Q9XG54,TAIR:AT1G09400.1,TAIR:AT1G76680.2,TAIR:AT1G76690.1,TrEMBL:A5AEX7,TrEMBL:F6I449,TrEMBL:Q76DL0;Derives_from=GSCOCT00013414001;Name=Cc10_g16510;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,GO:0010181,GO:0016491,CC_EC_number:1.3.1.42,PRODUCT:12-oxophytodienoate reductase 2,CC_functional_completeness:fragment,CC_gene:OPR2,CC_gene:OPR1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013414001~ 12-oxophytodienoate reductase 2~ OPR2~ fragment;original_location=complement(259869..260261);owner=coffea | |
| 52890 chr10 manual_curation exon 27575962 27576354 . - . Parent=GSCOCT00013414001 | |
| 52891 chr10 manual_curation CDS 27575962 27576354 . - 0 Parent=GSCOCT00013414001 | |
| 52892 chr10 manual_curation gene 27596608 27607590 . - . ID=GSCOCG00013415001;Name=Cc10_g16520 | |
| 52893 chr10 manual_curation mRNA 27596608 27607590 . - . ID=GSCOCT00013415001;Parent=GSCOCG00013415001;Name=Cc10_g16520 | |
| 52894 chr10 manual_curation polypeptide 27596608 27607590 . - . ID=GSCOCP00013415001;Dbxref=GENE3D:G3DSA:3.20.20.70,InterPro:IPR001155,InterPro:IPR013785,PFAM:PF00724,SwissProt:B9FSC8,SwissProt:Q8GYB8,SwissProt:Q9XG54,TAIR:AT1G09400.1,TAIR:AT1G76680.2,TAIR:AT1G76690.1,TrEMBL:A5AVR2,TrEMBL:G7K3S4,TrEMBL:Q76DL0;Derives_from=GSCOCT00013415001;Name=Cc10_g16520;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,GO:0010181,GO:0016491,CC_EC_number:1.3.1.42,PRODUCT:Putative 12-oxophytodienoate reductase 11,CC_functional_completeness:complete,CC_gene:OPR11,CC_gene:OPR2,CC_gene:OPR1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013415001~ Putative 12-oxophytodienoate reductase 11~ OPR11~ complete;original_location=complement(join(291466..291497%2C291165..291305%2C290912..291042%2C290395..290571%2C289493..289828%2C289240..289354%2C288690..288733%2C287124..287415%2C286889..287019%2C280515..280750));owner=coffea | |
| 52895 chr10 manual_curation exon 27596608 27596843 . - . Parent=GSCOCT00013415001 | |
| 52896 chr10 manual_curation exon 27602982 27603112 . - . Parent=GSCOCT00013415001 | |
| 52897 chr10 manual_curation exon 27603217 27603508 . - . Parent=GSCOCT00013415001 | |
| 52898 chr10 manual_curation exon 27604783 27604826 . - . Parent=GSCOCT00013415001 | |
| 52899 chr10 manual_curation exon 27605333 27605447 . - . Parent=GSCOCT00013415001 | |
| 52900 chr10 manual_curation exon 27605586 27605921 . - . Parent=GSCOCT00013415001 | |
| 52901 chr10 manual_curation exon 27606488 27606664 . - . Parent=GSCOCT00013415001 | |
| 52902 chr10 manual_curation exon 27607005 27607135 . - . Parent=GSCOCT00013415001 | |
| 52903 chr10 manual_curation exon 27607258 27607398 . - . Parent=GSCOCT00013415001 | |
| 52904 chr10 manual_curation exon 27607559 27607590 . - . Parent=GSCOCT00013415001 | |
| 52905 chr10 manual_curation CDS 27596608 27596843 . - 1 Parent=GSCOCT00013415001 | |
| 52906 chr10 manual_curation CDS 27602982 27603112 . - 2 Parent=GSCOCT00013415001 | |
| 52907 chr10 manual_curation CDS 27603217 27603508 . - 1 Parent=GSCOCT00013415001 | |
| 52908 chr10 manual_curation CDS 27604783 27604826 . - 2 Parent=GSCOCT00013415001 | |
| 52909 chr10 manual_curation CDS 27605333 27605447 . - 1 Parent=GSCOCT00013415001 | |
| 52910 chr10 manual_curation CDS 27605586 27605921 . - 1 Parent=GSCOCT00013415001 | |
| 52911 chr10 manual_curation CDS 27606488 27606664 . - 1 Parent=GSCOCT00013415001 | |
| 52912 chr10 manual_curation CDS 27607005 27607135 . - 2 Parent=GSCOCT00013415001 | |
| 52913 chr10 manual_curation CDS 27607258 27607398 . - 2 Parent=GSCOCT00013415001 | |
| 52914 chr10 manual_curation CDS 27607559 27607590 . - 0 Parent=GSCOCT00013415001 | |
| 52915 chr10 manual_curation gene 27616711 27617607 . - . ID=GSCOCG00013417001;Name=Cc10_g16530 | |
| 52916 chr10 manual_curation mRNA 27616711 27617607 . - . ID=GSCOCT00013417001;Parent=GSCOCG00013417001;Name=Cc10_g16530 | |
| 52917 chr10 manual_curation polypeptide 27616711 27617607 . - . ID=GSCOCP00013417001;Dbxref=GENE3D:G3DSA:3.20.20.70,InterPro:IPR001155,InterPro:IPR013785,PFAM:PF00724,SwissProt:B9FSC8,SwissProt:Q8LAH7,SwissProt:Q9XG54,TAIR:AT1G09400.1,TAIR:AT1G76680.2,TAIR:AT1G76690.1,TrEMBL:B9SK95,TrEMBL:C6TIW2,TrEMBL:I1JAQ7;Derives_from=GSCOCT00013417001;Name=Cc10_g16530;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,GO:0010181,GO:0016491,CC_EC_number:1.3.1.42,PRODUCT:12-oxophytodienoate reductase 1,CC_functional_completeness:fragment,CC_gene:OPR1,CC_gene:OPR11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00013417001~ 12-oxophytodienoate reductase 1~ OPR1~ fragment;original_location=complement(join(301403..301514%2C301176..301298%2C300618..300847));owner=coffea | |
| 52918 chr10 manual_curation exon 27616711 27616940 . - . Parent=GSCOCT00013417001 | |
| 52919 chr10 manual_curation exon 27617269 27617391 . - . Parent=GSCOCT00013417001 | |
| 52920 chr10 manual_curation exon 27617496 27617607 . - . Parent=GSCOCT00013417001 | |
| 52921 chr10 manual_curation CDS 27616711 27616940 . - 1 Parent=GSCOCT00013417001 | |
| 52922 chr10 manual_curation CDS 27617269 27617391 . - 1 Parent=GSCOCT00013417001 | |
| 52923 chr10 manual_curation CDS 27617496 27617607 . - 0 Parent=GSCOCT00013417001 | |
| 52924 chr11 manual_curation gene 5452 15176 . + . ID=GSCOCG00010267001;Name=Cc11_g00010 | |
| 52925 chr11 manual_curation mRNA 5452 15176 . + . ID=GSCOCT00010267001;Parent=GSCOCG00010267001;Name=Cc11_g00010 | |
| 52926 chr11 manual_curation polypeptide 6379 14727 . + . ID=GSCOCP00010267001;Dbxref=InterPro:IPR022228,PFAM:PF12579,TAIR:AT1G10820.2,TAIR:AT1G60670.2,TAIR:AT3G07565.4,TrEMBL:B9HJQ7,TrEMBL:B9RY47,TrEMBL:D7TAF0;Derives_from=GSCOCT00010267001;Name=Cc11_g00010;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of unknown function (DUF3755),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00010267001~ Putative Protein of unknown function (DUF3755)~ unknown_gene~ complete;original_location=join(6379..6599%2C8474..8617%2C10117..10216%2C10396..10452%2C11032..11140%2C12038..12126%2C13388..13449%2C13566..13662%2C14668..14727);owner=coffea | |
| 52927 chr11 manual_curation exon 5452 6599 . + . Parent=GSCOCT00010267001 | |
| 52928 chr11 manual_curation exon 8474 8617 . + . Parent=GSCOCT00010267001 | |
| 52929 chr11 manual_curation exon 10117 10216 . + . Parent=GSCOCT00010267001 | |
| 52930 chr11 manual_curation exon 10396 10452 . + . Parent=GSCOCT00010267001 | |
| 52931 chr11 manual_curation exon 11032 11140 . + . Parent=GSCOCT00010267001 | |
| 52932 chr11 manual_curation exon 12038 12126 . + . Parent=GSCOCT00010267001 | |
| 52933 chr11 manual_curation exon 13388 13449 . + . Parent=GSCOCT00010267001 | |
| 52934 chr11 manual_curation exon 13566 13662 . + . Parent=GSCOCT00010267001 | |
| 52935 chr11 manual_curation exon 14668 15176 . + . Parent=GSCOCT00010267001 | |
| 52936 chr11 manual_curation CDS 6379 6599 . + 0 Parent=GSCOCT00010267001 | |
| 52937 chr11 manual_curation CDS 8474 8617 . + 2 Parent=GSCOCT00010267001 | |
| 52938 chr11 manual_curation CDS 10117 10216 . + 2 Parent=GSCOCT00010267001 | |
| 52939 chr11 manual_curation CDS 10396 10452 . + 0 Parent=GSCOCT00010267001 | |
| 52940 chr11 manual_curation CDS 11032 11140 . + 0 Parent=GSCOCT00010267001 | |
| 52941 chr11 manual_curation CDS 12038 12126 . + 1 Parent=GSCOCT00010267001 | |
| 52942 chr11 manual_curation CDS 13388 13449 . + 0 Parent=GSCOCT00010267001 | |
| 52943 chr11 manual_curation CDS 13566 13662 . + 2 Parent=GSCOCT00010267001 | |
| 52944 chr11 manual_curation CDS 14668 14727 . + 0 Parent=GSCOCT00010267001 | |
| 52945 chr11 manual_curation gene 18396 21546 . + . ID=GSCOCG00010268001;Name=Cc11_g00020 | |
| 52946 chr11 manual_curation mRNA 18396 21546 . + . ID=GSCOCT00010268001;Parent=GSCOCG00010268001;Name=Cc11_g00020 | |
| 52947 chr11 manual_curation polypeptide 18396 21546 . + . ID=GSCOCP00010268001;Dbxref=InterPro:IPR005123,PFAM:PF03171,SwissProt:A2A1A0,SwissProt:O49561,SwissProt:Q9C6I4,TAIR:AT1G50960.1,TAIR:AT4G21200.1,TAIR:AT5G05600.1,TrEMBL:A5BF50,TrEMBL:B9RY49,TrEMBL:F6HG07;Derives_from=GSCOCT00010268001;Name=Cc11_g00020;Ontology_term=CC_evidence_code:ISS,GO:0016491,CC_EC_number:1.14.11.9,PRODUCT:Gibberellin 2-beta-dioxygenase 8,CC_functional_completeness:complete,CC_gene:GA2OX7,CC_gene:NCS1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00010268001~ Gibberellin 2-beta-dioxygenase 8~ GA2OX7~ complete;original_location=join(18396..18880%2C19944..20265%2C21307..21546);owner=coffea | |
| 52948 chr11 manual_curation exon 18396 18880 . + . Parent=GSCOCT00010268001 | |
| 52949 chr11 manual_curation exon 19944 20265 . + . Parent=GSCOCT00010268001 | |
| 52950 chr11 manual_curation exon 21307 21546 . + . Parent=GSCOCT00010268001 | |
| 52951 chr11 manual_curation CDS 18396 18880 . + 0 Parent=GSCOCT00010268001 | |
| 52952 chr11 manual_curation CDS 19944 20265 . + 2 Parent=GSCOCT00010268001 | |
| 52953 chr11 manual_curation CDS 21307 21546 . + 0 Parent=GSCOCT00010268001 | |
| 52954 chr11 manual_curation gene 21752 28575 . - . ID=GSCOCG00010269001;Name=Cc11_g00030 | |
| 52955 chr11 manual_curation mRNA 21752 28575 . - . ID=GSCOCT00010269001;Parent=GSCOCG00010269001;Name=Cc11_g00030 | |
| 52956 chr11 manual_curation polypeptide 22232 27291 . - . ID=GSCOCP00010269001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR008030,InterPro:IPR013857,InterPro:IPR016040,PFAM:PF05368,PFAM:PF08547,TAIR:AT1G16720.1,TAIR:AT4G18810.2,TrEMBL:A9PHQ9,TrEMBL:B9N5C7,TrEMBL:F6GYH4;Derives_from=GSCOCT00010269001;Name=Cc11_g00030;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,CC_EC_number:missing_EC_number,PRODUCT:high chlorophyll fluorescence phenotype 173,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00010269001~ high chlorophyll fluorescence phenotype 173~ unknown_gene~ complete;original_location=complement(join(27019..27291%2C26571..26783%2C26107..26311%2C25734..25809%2C25464..25599%2C25243..25347%2C24941..25024%2C24283..24372%2C24137..24202%2C23580..23636%2C22563..22640%2C22429..22476%2C22232..22303));owner=coffea | |
| 52957 chr11 manual_curation exon 28425 28575 . - . Parent=GSCOCT00010269001 | |
| 52958 chr11 manual_curation exon 21752 22303 . - . Parent=GSCOCT00010269001 | |
| 52959 chr11 manual_curation exon 22429 22476 . - . Parent=GSCOCT00010269001 | |
| 52960 chr11 manual_curation exon 22563 22640 . - . Parent=GSCOCT00010269001 | |
| 52961 chr11 manual_curation exon 23580 23636 . - . Parent=GSCOCT00010269001 | |
| 52962 chr11 manual_curation exon 24137 24202 . - . Parent=GSCOCT00010269001 | |
| 52963 chr11 manual_curation exon 24283 24372 . - . Parent=GSCOCT00010269001 | |
| 52964 chr11 manual_curation exon 24941 25024 . - . Parent=GSCOCT00010269001 | |
| 52965 chr11 manual_curation exon 25243 25347 . - . Parent=GSCOCT00010269001 | |
| 52966 chr11 manual_curation exon 25464 25599 . - . Parent=GSCOCT00010269001 | |
| 52967 chr11 manual_curation exon 25734 25809 . - . Parent=GSCOCT00010269001 | |
| 52968 chr11 manual_curation exon 26107 26311 . - . Parent=GSCOCT00010269001 | |
| 52969 chr11 manual_curation exon 26571 26783 . - . Parent=GSCOCT00010269001 | |
| 52970 chr11 manual_curation exon 27019 27694 . - . Parent=GSCOCT00010269001 | |
| 52971 chr11 manual_curation CDS 22232 22303 . - 0 Parent=GSCOCT00010269001 | |
| 52972 chr11 manual_curation CDS 22429 22476 . - 0 Parent=GSCOCT00010269001 | |
| 52973 chr11 manual_curation CDS 22563 22640 . - 0 Parent=GSCOCT00010269001 | |
| 52974 chr11 manual_curation CDS 23580 23636 . - 0 Parent=GSCOCT00010269001 | |
| 52975 chr11 manual_curation CDS 24137 24202 . - 0 Parent=GSCOCT00010269001 | |
| 52976 chr11 manual_curation CDS 24283 24372 . - 0 Parent=GSCOCT00010269001 | |
| 52977 chr11 manual_curation CDS 24941 25024 . - 0 Parent=GSCOCT00010269001 | |
| 52978 chr11 manual_curation CDS 25243 25347 . - 0 Parent=GSCOCT00010269001 | |
| 52979 chr11 manual_curation CDS 25464 25599 . - 2 Parent=GSCOCT00010269001 | |
| 52980 chr11 manual_curation CDS 25734 25809 . - 1 Parent=GSCOCT00010269001 | |
| 52981 chr11 manual_curation CDS 26107 26311 . - 0 Parent=GSCOCT00010269001 | |
| 52982 chr11 manual_curation CDS 26571 26783 . - 0 Parent=GSCOCT00010269001 | |
| 52983 chr11 manual_curation CDS 27019 27291 . - 0 Parent=GSCOCT00010269001 | |
| 52984 chr11 manual_curation gene 33678 38039 . - . ID=GSCOCG00010271001;Name=Cc11_g00040 | |
| 52985 chr11 manual_curation mRNA 33678 38039 . - . ID=GSCOCT00010271001;Parent=GSCOCG00010271001;Name=Cc11_g00040 | |
| 52986 chr11 manual_curation polypeptide 33678 38039 . - . ID=GSCOCP00010271001;Dbxref=InterPro:IPR013216,PFAM:PF08241,SwissProt:Q6ZIK0,SwissProt:Q8KZ94,SwissProt:Q9ZSK1,TAIR:AT1G64970.1,TAIR:AT1G73600.2,TAIR:AT3G18000.1,TrEMBL:D4P3I4,TrEMBL:E7EC33,TrEMBL:G3M4F6;Derives_from=GSCOCT00010271001;Name=Cc11_g00040;Ontology_term=CC_evidence_code:ISS,GO:0008152,GO:0008168,CC_EC_number:2.1.1.95,PRODUCT:Probable tocopherol O-methyltransferase%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:VTE4,CC_gene:rebM;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00010271001~ Probable tocopherol O-methyltransferase%2C chloroplastic~ VTE4~ fragment;original_location=complement(join(37934..38039%2C35248..35417%2C34470..34574%2C34152..34355%2C33886..33988%2C33678..33781));owner=coffea | |
| 52987 chr11 manual_curation exon 33678 33781 . - . Parent=GSCOCT00010271001 | |
| 52988 chr11 manual_curation exon 33886 33988 . - . Parent=GSCOCT00010271001 | |
| 52989 chr11 manual_curation exon 34152 34355 . - . Parent=GSCOCT00010271001 | |
| 52990 chr11 manual_curation exon 34470 34574 . - . Parent=GSCOCT00010271001 | |
| 52991 chr11 manual_curation exon 35248 35417 . - . Parent=GSCOCT00010271001 | |
| 52992 chr11 manual_curation exon 37934 38039 . - . Parent=GSCOCT00010271001 | |
| 52993 chr11 manual_curation CDS 33678 33781 . - 1 Parent=GSCOCT00010271001 | |
| 52994 chr11 manual_curation CDS 33886 33988 . - 0 Parent=GSCOCT00010271001 | |
| 52995 chr11 manual_curation CDS 34152 34355 . - 0 Parent=GSCOCT00010271001 | |
| 52996 chr11 manual_curation CDS 34470 34574 . - 0 Parent=GSCOCT00010271001 | |
| 52997 chr11 manual_curation CDS 35248 35417 . - 1 Parent=GSCOCT00010271001 | |
| 52998 chr11 manual_curation CDS 37934 38039 . - 0 Parent=GSCOCT00010271001 | |
| 52999 chr11 manual_curation gene 53023 69006 . - . ID=GSCOCG00010275001;Name=Cc11_g00050 | |
| 53000 chr11 manual_curation mRNA 53023 69006 . - . ID=GSCOCT00010275001;Parent=GSCOCG00010275001;Name=Cc11_g00050 | |
| 53001 chr11 manual_curation polypeptide 53473 68751 . - . ID=GSCOCP00010275001;Dbxref=InterPro:IPR022227,PFAM:PF12576,TAIR:AT2G46915.1,TAIR:AT3G19340.1,TAIR:AT5G13940.1,TrEMBL:B9GRU3,TrEMBL:B9RMZ7,TrEMBL:F6I309;Derives_from=GSCOCT00010275001;Name=Cc11_g00050;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF3754),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00010275001~ Protein of unknown function (DUF3754)~ unknown_gene~ complete;original_location=complement(join(68294..68751%2C66949..67230%2C64809..64988%2C64110..64245%2C62183..62523%2C60560..60689%2C57093..57221%2C56920..56964%2C55982..56061%2C54875..54971%2C54695..54784%2C54436..54489%2C53696..53761%2C53473..53625));owner=coffea | |
| 53002 chr11 manual_curation exon 53023 53625 . - . Parent=GSCOCT00010275001 | |
| 53003 chr11 manual_curation exon 53696 53761 . - . Parent=GSCOCT00010275001 | |
| 53004 chr11 manual_curation exon 54436 54489 . - . Parent=GSCOCT00010275001 | |
| 53005 chr11 manual_curation exon 54695 54784 . - . Parent=GSCOCT00010275001 | |
| 53006 chr11 manual_curation exon 54875 54971 . - . Parent=GSCOCT00010275001 | |
| 53007 chr11 manual_curation exon 55982 56061 . - . Parent=GSCOCT00010275001 | |
| 53008 chr11 manual_curation exon 56920 56964 . - . Parent=GSCOCT00010275001 | |
| 53009 chr11 manual_curation exon 57093 57221 . - . Parent=GSCOCT00010275001 | |
| 53010 chr11 manual_curation exon 60560 60689 . - . Parent=GSCOCT00010275001 | |
| 53011 chr11 manual_curation exon 62183 62523 . - . Parent=GSCOCT00010275001 | |
| 53012 chr11 manual_curation exon 64110 64245 . - . Parent=GSCOCT00010275001 | |
| 53013 chr11 manual_curation exon 64809 64988 . - . Parent=GSCOCT00010275001 | |
| 53014 chr11 manual_curation exon 66949 67230 . - . Parent=GSCOCT00010275001 | |
| 53015 chr11 manual_curation exon 68294 69006 . - . Parent=GSCOCT00010275001 | |
| 53016 chr11 manual_curation CDS 53473 53625 . - 0 Parent=GSCOCT00010275001 | |
| 53017 chr11 manual_curation CDS 53696 53761 . - 0 Parent=GSCOCT00010275001 | |
| 53018 chr11 manual_curation CDS 54436 54489 . - 0 Parent=GSCOCT00010275001 | |
| 53019 chr11 manual_curation CDS 54695 54784 . - 0 Parent=GSCOCT00010275001 | |
| 53020 chr11 manual_curation CDS 54875 54971 . - 2 Parent=GSCOCT00010275001 | |
| 53021 chr11 manual_curation CDS 55982 56061 . - 0 Parent=GSCOCT00010275001 | |
| 53022 chr11 manual_curation CDS 56920 56964 . - 0 Parent=GSCOCT00010275001 | |
| 53023 chr11 manual_curation CDS 57093 57221 . - 0 Parent=GSCOCT00010275001 | |
| 53024 chr11 manual_curation CDS 60560 60689 . - 2 Parent=GSCOCT00010275001 | |
| 53025 chr11 manual_curation CDS 62183 62523 . - 0 Parent=GSCOCT00010275001 | |
| 53026 chr11 manual_curation CDS 64110 64245 . - 2 Parent=GSCOCT00010275001 | |
| 53027 chr11 manual_curation CDS 64809 64988 . - 2 Parent=GSCOCT00010275001 | |
| 53028 chr11 manual_curation CDS 66949 67230 . - 2 Parent=GSCOCT00010275001 | |
| 53029 chr11 manual_curation CDS 68294 68751 . - 0 Parent=GSCOCT00010275001 | |
| 53030 chr11 manual_curation gene 73605 80517 . - . ID=GSCOCG00019421001;Name=Cc11_g00060 | |
| 53031 chr11 manual_curation mRNA 73605 80517 . - . ID=GSCOCT00019421001;Parent=GSCOCG00019421001;Name=Cc11_g00060 | |
| 53032 chr11 manual_curation polypeptide 73605 80517 . - . ID=GSCOCP00019421001;Dbxref=InterPro:IPR018162,InterPro:IPR018164,InterPro:IPR018165,PFAM:PF01411,PRINTS:PR00980,PROFILE:PS50860,SUPERFAMILY:SSF101353,SwissProt:P36428,SwissProt:Q54Y20,SwissProt:Q8BGQ7,TAIR:AT1G50200.1,TAIR:AT5G22800.1,TrEMBL:B9SYR5,TrEMBL:D7T7J0,TrEMBL:F6HF38;Derives_from=GSCOCT00019421001;Name=Cc11_g00060;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,GO:0004813,GO:0005524,GO:0005737,GO:0006412,GO:0006419,CC_EC_number:6.1.1.7,PRODUCT:Alanine--tRNA ligase,CC_functional_completeness:fragment,CC_gene:ALATS,CC_gene:alaS,CC_gene:Aars;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019421001~ Alanine--tRNA ligase~ ALATS~ fragment;original_location=complement(join(7416..7604%2C6482..6628%2C6228..6380%2C5165..5294%2C4427..4523%2C4131..4251%2C3489..3548%2C1888..1938%2C1679..1774%2C1362..1463%2C692..865));owner=coffea | |
| 53033 chr11 manual_curation exon 73605 73778 . - . Parent=GSCOCT00019421001 | |
| 53034 chr11 manual_curation exon 74275 74376 . - . Parent=GSCOCT00019421001 | |
| 53035 chr11 manual_curation exon 74592 74687 . - . Parent=GSCOCT00019421001 | |
| 53036 chr11 manual_curation exon 74801 74851 . - . Parent=GSCOCT00019421001 | |
| 53037 chr11 manual_curation exon 76402 76461 . - . Parent=GSCOCT00019421001 | |
| 53038 chr11 manual_curation exon 77044 77164 . - . Parent=GSCOCT00019421001 | |
| 53039 chr11 manual_curation exon 77340 77436 . - . Parent=GSCOCT00019421001 | |
| 53040 chr11 manual_curation exon 78078 78207 . - . Parent=GSCOCT00019421001 | |
| 53041 chr11 manual_curation exon 79141 79293 . - . Parent=GSCOCT00019421001 | |
| 53042 chr11 manual_curation exon 79395 79541 . - . Parent=GSCOCT00019421001 | |
| 53043 chr11 manual_curation exon 80329 80517 . - . Parent=GSCOCT00019421001 | |
| 53044 chr11 manual_curation CDS 73605 73778 . - 0 Parent=GSCOCT00019421001 | |
| 53045 chr11 manual_curation CDS 74275 74376 . - 0 Parent=GSCOCT00019421001 | |
| 53046 chr11 manual_curation CDS 74592 74687 . - 0 Parent=GSCOCT00019421001 | |
| 53047 chr11 manual_curation CDS 74801 74851 . - 0 Parent=GSCOCT00019421001 | |
| 53048 chr11 manual_curation CDS 76402 76461 . - 0 Parent=GSCOCT00019421001 | |
| 53049 chr11 manual_curation CDS 77044 77164 . - 2 Parent=GSCOCT00019421001 | |
| 53050 chr11 manual_curation CDS 77340 77436 . - 1 Parent=GSCOCT00019421001 | |
| 53051 chr11 manual_curation CDS 78078 78207 . - 0 Parent=GSCOCT00019421001 | |
| 53052 chr11 manual_curation CDS 79141 79293 . - 0 Parent=GSCOCT00019421001 | |
| 53053 chr11 manual_curation CDS 79395 79541 . - 0 Parent=GSCOCT00019421001 | |
| 53054 chr11 manual_curation CDS 80329 80517 . - 0 Parent=GSCOCT00019421001 | |
| 53055 chr11 manual_curation gene 80568 81669 . - . ID=GSCOCG00019422001;Name=Cc11_g00070 | |
| 53056 chr11 manual_curation mRNA 80568 81669 . - . ID=GSCOCT00019422001;Parent=GSCOCG00019422001;Name=Cc11_g00070 | |
| 53057 chr11 manual_curation polypeptide 80568 81669 . - . ID=GSCOCP00019422001;Dbxref=InterPro:IPR018164,InterPro:IPR018165,PFAM:PF01411,PROFILE:PS50860,SwissProt:O01541,SwissProt:P36428,SwissProt:Q5A8K2,TAIR:AT1G50200.1,TAIR:AT5G22800.1,TrEMBL:B9H602,TrEMBL:D7T7J0,TrEMBL:F6HF38;Derives_from=GSCOCT00019422001;Name=Cc11_g00070;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,GO:0004813,GO:0005524,GO:0005737,GO:0006412,GO:0006419,CC_EC_number:6.1.1.7,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:ALATS,CC_gene:ALA1,CC_gene:aars-2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019422001~ Putative uncharacterized protein~ ALATS~ fragment;original_location=complement(join(8393..8756%2C7655..7950));owner=coffea | |
| 53058 chr11 manual_curation exon 80568 80863 . - . Parent=GSCOCT00019422001 | |
| 53059 chr11 manual_curation exon 81306 81669 . - . Parent=GSCOCT00019422001 | |
| 53060 chr11 manual_curation CDS 80568 80863 . - 1 Parent=GSCOCT00019422001 | |
| 53061 chr11 manual_curation CDS 81306 81669 . - 0 Parent=GSCOCT00019422001 | |
| 53062 chr11 manual_curation gene 107687 112784 . + . ID=GSCOCG00019424001;Name=Cc11_g00080 | |
| 53063 chr11 manual_curation mRNA 107687 112784 . + . ID=GSCOCT00019424001;Parent=GSCOCG00019424001;Name=Cc11_g00080 | |
| 53064 chr11 manual_curation polypeptide 107687 112290 . + . ID=GSCOCP00019424001;Dbxref=InterPro:IPR003156,InterPro:IPR012947,InterPro:IPR018163,InterPro:IPR018165,PFAM:PF02272,PFAM:PF07973,PROFILE:PS50860,SMART:SM00863,SUPERFAMILY:SSF55186,SwissProt:P36428,SwissProt:P40825,SwissProt:Q5A8K2,TAIR:AT1G50200.1,TAIR:AT5G22800.1,TrEMBL:B9SYR5,TrEMBL:D7T7J0,TrEMBL:F6HF38;Derives_from=GSCOCT00019424001;Name=Cc11_g00080;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,GO:0004813,GO:0005524,GO:0005737,GO:0006412,GO:0006419,GO:0043039,CC_EC_number:6.1.1.7,PRODUCT:Alanine--tRNA ligase,CC_functional_completeness:fragment,CC_gene:ALATS,CC_gene:ALA1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019424001~ Alanine--tRNA ligase~ ALATS~ fragment;original_location=join(34774..34818%2C34875..34913%2C35027..35098%2C35230..35305%2C35433..35575%2C35668..35776%2C35844..36031%2C36434..36622%2C36715..36823%2C36891..37078%2C38519..38608%2C38735..38917%2C38991..39167%2C39303..39377);owner=coffea | |
| 53065 chr11 manual_curation exon 107687 107731 . + . Parent=GSCOCT00019424001 | |
| 53066 chr11 manual_curation exon 107788 107826 . + . Parent=GSCOCT00019424001 | |
| 53067 chr11 manual_curation exon 107940 108011 . + . Parent=GSCOCT00019424001 | |
| 53068 chr11 manual_curation exon 108143 108218 . + . Parent=GSCOCT00019424001 | |
| 53069 chr11 manual_curation exon 108346 108488 . + . Parent=GSCOCT00019424001 | |
| 53070 chr11 manual_curation exon 108581 108689 . + . Parent=GSCOCT00019424001 | |
| 53071 chr11 manual_curation exon 108757 108944 . + . Parent=GSCOCT00019424001 | |
| 53072 chr11 manual_curation exon 109347 109535 . + . Parent=GSCOCT00019424001 | |
| 53073 chr11 manual_curation exon 109628 109736 . + . Parent=GSCOCT00019424001 | |
| 53074 chr11 manual_curation exon 109804 109991 . + . Parent=GSCOCT00019424001 | |
| 53075 chr11 manual_curation exon 111432 111521 . + . Parent=GSCOCT00019424001 | |
| 53076 chr11 manual_curation exon 111648 111830 . + . Parent=GSCOCT00019424001 | |
| 53077 chr11 manual_curation exon 111904 112080 . + . Parent=GSCOCT00019424001 | |
| 53078 chr11 manual_curation exon 112216 112784 . + . Parent=GSCOCT00019424001 | |
| 53079 chr11 manual_curation CDS 107687 107731 . + 0 Parent=GSCOCT00019424001 | |
| 53080 chr11 manual_curation CDS 107788 107826 . + 0 Parent=GSCOCT00019424001 | |
| 53081 chr11 manual_curation CDS 107940 108011 . + 0 Parent=GSCOCT00019424001 | |
| 53082 chr11 manual_curation CDS 108143 108218 . + 0 Parent=GSCOCT00019424001 | |
| 53083 chr11 manual_curation CDS 108346 108488 . + 1 Parent=GSCOCT00019424001 | |
| 53084 chr11 manual_curation CDS 108581 108689 . + 0 Parent=GSCOCT00019424001 | |
| 53085 chr11 manual_curation CDS 108757 108944 . + 1 Parent=GSCOCT00019424001 | |
| 53086 chr11 manual_curation CDS 109347 109535 . + 0 Parent=GSCOCT00019424001 | |
| 53087 chr11 manual_curation CDS 109628 109736 . + 0 Parent=GSCOCT00019424001 | |
| 53088 chr11 manual_curation CDS 109804 109991 . + 1 Parent=GSCOCT00019424001 | |
| 53089 chr11 manual_curation CDS 111432 111521 . + 0 Parent=GSCOCT00019424001 | |
| 53090 chr11 manual_curation CDS 111648 111830 . + 0 Parent=GSCOCT00019424001 | |
| 53091 chr11 manual_curation CDS 111904 112080 . + 0 Parent=GSCOCT00019424001 | |
| 53092 chr11 manual_curation CDS 112216 112290 . + 0 Parent=GSCOCT00019424001 | |
| 53093 chr11 manual_curation gene 134581 149445 . + . ID=GSCOCG00019425001;Name=Cc11_g00090 | |
| 53094 chr11 manual_curation mRNA 134581 149445 . + . ID=GSCOCT00019425001;Parent=GSCOCG00019425001;Name=Cc11_g00090 | |
| 53095 chr11 manual_curation polypeptide 135381 149260 . + . ID=GSCOCP00019425001;Dbxref=InterPro:IPR012336,SUPERFAMILY:SSF52833,TAIR:AT3G19780.1,TrEMBL:B9HGN1,TrEMBL:F4JCD3,TrEMBL:F4JCD4;Derives_from=GSCOCT00019425001;Name=Cc11_g00090;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative LOCATED IN,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019425001~ Putative LOCATED IN: endomembrane system%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF179 (InterPro:IPR003774)%2C Thioredoxin fold (InterPro:IPR012335)%2C Thioredoxin-like fold (InterPro:IPR012336)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF179) (TAIR:AT1G33780.1)%3B Has 74 Blast hits to 72 proteins in 32 species: Archae - 0%3B Bacteria - 24%3B Metazoa - 11%3B Fungi - 3%3B Plants - 32%3B Viruses - 0%3B Other Eukaryotes - 4 (source: NCBI BLink).~ unknown_gene~ fragment;original_location=join(62468..62735%2C63948..64007%2C64103..64450%2C64506..64513%2C68192..69467%2C71199..71290%2C71949..72078%2C76286..76347);owner=coffea | |
| 53096 chr11 manual_curation exon 134581 135648 . + . Parent=GSCOCT00019425001 | |
| 53097 chr11 manual_curation exon 136861 136920 . + . Parent=GSCOCT00019425001 | |
| 53098 chr11 manual_curation exon 137016 137363 . + . Parent=GSCOCT00019425001 | |
| 53099 chr11 manual_curation exon 137419 137426 . + . Parent=GSCOCT00019425001 | |
| 53100 chr11 manual_curation exon 141105 142380 . + . Parent=GSCOCT00019425001 | |
| 53101 chr11 manual_curation exon 144112 144203 . + . Parent=GSCOCT00019425001 | |
| 53102 chr11 manual_curation exon 144862 144991 . + . Parent=GSCOCT00019425001 | |
| 53103 chr11 manual_curation exon 149199 149445 . + . Parent=GSCOCT00019425001 | |
| 53104 chr11 manual_curation CDS 135381 135648 . + 0 Parent=GSCOCT00019425001 | |
| 53105 chr11 manual_curation CDS 136861 136920 . + 1 Parent=GSCOCT00019425001 | |
| 53106 chr11 manual_curation CDS 137016 137363 . + 1 Parent=GSCOCT00019425001 | |
| 53107 chr11 manual_curation CDS 137419 137426 . + 1 Parent=GSCOCT00019425001 | |
| 53108 chr11 manual_curation CDS 141105 142380 . + 0 Parent=GSCOCT00019425001 | |
| 53109 chr11 manual_curation CDS 144112 144203 . + 1 Parent=GSCOCT00019425001 | |
| 53110 chr11 manual_curation CDS 144862 144991 . + 0 Parent=GSCOCT00019425001 | |
| 53111 chr11 manual_curation CDS 149199 149260 . + 1 Parent=GSCOCT00019425001 | |
| 53112 chr11 manual_curation gene 149746 153514 . + . ID=GSCOCG00019426001;Name=Cc11_g00100 | |
| 53113 chr11 manual_curation mRNA 149746 153514 . + . ID=GSCOCT00019426001;Parent=GSCOCG00019426001;Name=Cc11_g00100 | |
| 53114 chr11 manual_curation polypeptide 149746 153514 . + . ID=GSCOCP00019426001;Dbxref=InterPro:IPR003774,PFAM:PF02622,TAIR:AT3G19780.1,TrEMBL:B9HGN1,TrEMBL:B9S4I9,TrEMBL:F6HFY9;Derives_from=GSCOCT00019426001;Name=Cc11_g00100;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019426001~ Putative uncharacterized protein~ unknown_gene~ modules;original_location=join(76833..76874%2C77950..78283%2C79955..80601);owner=coffea | |
| 53115 chr11 manual_curation exon 149746 149787 . + . Parent=GSCOCT00019426001 | |
| 53116 chr11 manual_curation exon 150863 151196 . + . Parent=GSCOCT00019426001 | |
| 53117 chr11 manual_curation exon 152868 153514 . + . Parent=GSCOCT00019426001 | |
| 53118 chr11 manual_curation CDS 149746 149787 . + 0 Parent=GSCOCT00019426001 | |
| 53119 chr11 manual_curation CDS 150863 151196 . + 0 Parent=GSCOCT00019426001 | |
| 53120 chr11 manual_curation CDS 152868 153514 . + 1 Parent=GSCOCT00019426001 | |
| 53121 chr11 manual_curation gene 165023 165875 . - . ID=GSCOCG00019428001;Name=Cc11_g00110 | |
| 53122 chr11 manual_curation mRNA 165023 165875 . - . ID=GSCOCT00019428001;Parent=GSCOCG00019428001;Name=Cc11_g00110 | |
| 53123 chr11 manual_curation polypeptide 165023 165875 . - . ID=GSCOCP00019428001;Dbxref=SwissProt:A2YU42,SwissProt:Q9LHZ7,SwissProt:Q9SZL9,TAIR:AT2G33100.1,TAIR:AT3G03050.1,TAIR:AT4G38190.1,TrEMBL:B9HPM1,TrEMBL:B9RKY2,TrEMBL:D7MEW7;Derives_from=GSCOCT00019428001;Name=Cc11_g00110;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.4.1.12,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:CSLD4,CC_gene:CSLD2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019428001~ Hypothetical protein~ CSLD4~ missing_functional_completeness;original_location=complement(join(92619..92962%2C92110..92287));owner=coffea | |
| 53124 chr11 manual_curation exon 165023 165200 . - . Parent=GSCOCT00019428001 | |
| 53125 chr11 manual_curation exon 165532 165875 . - . Parent=GSCOCT00019428001 | |
| 53126 chr11 manual_curation CDS 165023 165200 . - 2 Parent=GSCOCT00019428001 | |
| 53127 chr11 manual_curation CDS 165532 165875 . - 0 Parent=GSCOCT00019428001 | |
| 53128 chr11 manual_curation gene 294371 296523 . + . ID=GSCOCG00019434001;Name=Cc11_g00120 | |
| 53129 chr11 manual_curation mRNA 294371 296523 . + . ID=GSCOCT00019434001;Parent=GSCOCG00019434001;Name=Cc11_g00120 | |
| 53130 chr11 manual_curation polypeptide 294371 296523 . + . ID=GSCOCP00019434001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR011009,InterPro:IPR017442,PFAM:PF00069,PROFILE:PS50011,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q5JK68,SwissProt:Q6I5Y0,SwissProt:Q9ZVM9,TAIR:AT1G33770.1,TAIR:AT4G10010.1,TAIR:AT5G44290.1,TrEMBL:A5ASI9,TrEMBL:B9HG57,TrEMBL:B9T6L6;Derives_from=GSCOCT00019434001;Name=Cc11_g00120;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.22,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:At1g54610,CC_gene:CDKC-1,CC_gene:CDKC-2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019434001~ Hypothetical protein~ At1g54610~ missing_functional_completeness;original_location=join(221458..221616%2C222957..223043%2C223323..223610);owner=coffea | |
| 53131 chr11 manual_curation exon 294371 294529 . + . Parent=GSCOCT00019434001 | |
| 53132 chr11 manual_curation exon 295870 295956 . + . Parent=GSCOCT00019434001 | |
| 53133 chr11 manual_curation exon 296236 296523 . + . Parent=GSCOCT00019434001 | |
| 53134 chr11 manual_curation CDS 294371 294529 . + 0 Parent=GSCOCT00019434001 | |
| 53135 chr11 manual_curation CDS 295870 295956 . + 0 Parent=GSCOCT00019434001 | |
| 53136 chr11 manual_curation CDS 296236 296523 . + 0 Parent=GSCOCT00019434001 | |
| 53137 chr11 manual_curation gene 297198 305506 . - . ID=GSCOCG00019435001;Name=Cc11_g00130 | |
| 53138 chr11 manual_curation mRNA 297198 305506 . - . ID=GSCOCT00019435001;Parent=GSCOCG00019435001;Name=Cc11_g00130 | |
| 53139 chr11 manual_curation polypeptide 297198 305506 . - . ID=GSCOCP00019435001;Dbxref=InterPro:IPR004813,PFAM:PF03169,SwissProt:Q6H7J6,SwissProt:Q7X660,SwissProt:Q9SHY2,TAIR:AT1G48370.1,TAIR:AT1G65730.1,TAIR:AT3G17650.1,TIGRFAMs:TIGR00728,TrEMBL:B9H5T3,TrEMBL:F6HF42,TrEMBL:I1NCY4;Derives_from=GSCOCT00019435001;Name=Cc11_g00130;Ontology_term=CC_evidence_code:ISS,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Probable metal-nicotianamine transporter YSL7,CC_functional_completeness:complete,CC_gene:YSL7,CC_gene:YSL11,CC_gene:YSL14;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019435001~ Probable metal-nicotianamine transporter YSL7~ YSL7~ complete;original_location=complement(join(232215..232593%2C231890..232053%2C231643..231740%2C231355..231489%2C225607..225796%2C224285..225385));owner=coffea | |
| 53140 chr11 manual_curation exon 297198 298298 . - . Parent=GSCOCT00019435001 | |
| 53141 chr11 manual_curation exon 298520 298709 . - . Parent=GSCOCT00019435001 | |
| 53142 chr11 manual_curation exon 304268 304402 . - . Parent=GSCOCT00019435001 | |
| 53143 chr11 manual_curation exon 304556 304653 . - . Parent=GSCOCT00019435001 | |
| 53144 chr11 manual_curation exon 304803 304966 . - . Parent=GSCOCT00019435001 | |
| 53145 chr11 manual_curation exon 305128 305506 . - . Parent=GSCOCT00019435001 | |
| 53146 chr11 manual_curation CDS 297198 298298 . - 0 Parent=GSCOCT00019435001 | |
| 53147 chr11 manual_curation CDS 298520 298709 . - 2 Parent=GSCOCT00019435001 | |
| 53148 chr11 manual_curation CDS 304268 304402 . - 2 Parent=GSCOCT00019435001 | |
| 53149 chr11 manual_curation CDS 304556 304653 . - 0 Parent=GSCOCT00019435001 | |
| 53150 chr11 manual_curation CDS 304803 304966 . - 1 Parent=GSCOCT00019435001 | |
| 53151 chr11 manual_curation CDS 305128 305506 . - 0 Parent=GSCOCT00019435001 | |
| 53152 chr11 manual_curation gene 309929 334828 . - . ID=GSCOCG00019436001;Name=Cc11_g00140 | |
| 53153 chr11 manual_curation mRNA 309929 334828 . - . ID=GSCOCT00019436001;Parent=GSCOCG00019436001;Name=Cc11_g00140 | |
| 53154 chr11 manual_curation polypeptide 310208 334002 . - . ID=GSCOCP00019436001;Dbxref=InterPro:IPR003593,InterPro:IPR003959,InterPro:IPR003960,PFAM:PF00004,PROSITE:PS00674,SMART:SM00382,SwissProt:P28737,SwissProt:Q5ZK92,SwissProt:Q7ZZ25,TAIR:AT1G02890.1,TAIR:AT1G50140.1,TAIR:AT3G19740.1,TrEMBL:F4JCC9,TrEMBL:F6HF44,TrEMBL:I1LIT3;Derives_from=GSCOCT00019436001;Name=Cc11_g00140;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0017111,CC_EC_number:3.6.4.3,PRODUCT:Putative Protein MSP1,CC_functional_completeness:modules,CC_gene:MSP1,CC_gene:SPAST,CC_gene:atad1a;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019436001~ Putative Protein MSP1~ MSP1~ modules;original_location=complement(join(260500..261089%2C260296..260420%2C260085..260179%2C259030..259266%2C258612..258702%2C256158..256206%2C255348..255413%2C254277..254428%2C252584..252654%2C252315..252509%2C252187..252225%2C250510..250617%2C248996..249085%2C247732..247807%2C246250..246346%2C246089..246158%2C245847..246023%2C245646..245768%2C243802..243885%2C240583..240767%2C240187..240325%2C240045..240104%2C238947..239018%2C237295..237402));owner=coffea | |
| 53155 chr11 manual_curation exon 309929 310315 . - . Parent=GSCOCT00019436001 | |
| 53156 chr11 manual_curation exon 311860 311931 . - . Parent=GSCOCT00019436001 | |
| 53157 chr11 manual_curation exon 312958 313017 . - . Parent=GSCOCT00019436001 | |
| 53158 chr11 manual_curation exon 313100 313238 . - . Parent=GSCOCT00019436001 | |
| 53159 chr11 manual_curation exon 313496 313680 . - . Parent=GSCOCT00019436001 | |
| 53160 chr11 manual_curation exon 316715 316798 . - . Parent=GSCOCT00019436001 | |
| 53161 chr11 manual_curation exon 318559 318681 . - . Parent=GSCOCT00019436001 | |
| 53162 chr11 manual_curation exon 318760 318936 . - . Parent=GSCOCT00019436001 | |
| 53163 chr11 manual_curation exon 319002 319071 . - . Parent=GSCOCT00019436001 | |
| 53164 chr11 manual_curation exon 319163 319259 . - . Parent=GSCOCT00019436001 | |
| 53165 chr11 manual_curation exon 320645 320720 . - . Parent=GSCOCT00019436001 | |
| 53166 chr11 manual_curation exon 321909 321998 . - . Parent=GSCOCT00019436001 | |
| 53167 chr11 manual_curation exon 323423 323530 . - . Parent=GSCOCT00019436001 | |
| 53168 chr11 manual_curation exon 325100 325138 . - . Parent=GSCOCT00019436001 | |
| 53169 chr11 manual_curation exon 325228 325422 . - . Parent=GSCOCT00019436001 | |
| 53170 chr11 manual_curation exon 325497 325567 . - . Parent=GSCOCT00019436001 | |
| 53171 chr11 manual_curation exon 327190 327341 . - . Parent=GSCOCT00019436001 | |
| 53172 chr11 manual_curation exon 328261 328326 . - . Parent=GSCOCT00019436001 | |
| 53173 chr11 manual_curation exon 329071 329119 . - . Parent=GSCOCT00019436001 | |
| 53174 chr11 manual_curation exon 331525 331615 . - . Parent=GSCOCT00019436001 | |
| 53175 chr11 manual_curation exon 331943 332179 . - . Parent=GSCOCT00019436001 | |
| 53176 chr11 manual_curation exon 332998 333092 . - . Parent=GSCOCT00019436001 | |
| 53177 chr11 manual_curation exon 333209 333333 . - . Parent=GSCOCT00019436001 | |
| 53178 chr11 manual_curation exon 333413 334828 . - . Parent=GSCOCT00019436001 | |
| 53179 chr11 manual_curation CDS 310208 310315 . - 0 Parent=GSCOCT00019436001 | |
| 53180 chr11 manual_curation CDS 311860 311931 . - 0 Parent=GSCOCT00019436001 | |
| 53181 chr11 manual_curation CDS 312958 313017 . - 0 Parent=GSCOCT00019436001 | |
| 53182 chr11 manual_curation CDS 313100 313238 . - 2 Parent=GSCOCT00019436001 | |
| 53183 chr11 manual_curation CDS 313496 313680 . - 0 Parent=GSCOCT00019436001 | |
| 53184 chr11 manual_curation CDS 316715 316798 . - 0 Parent=GSCOCT00019436001 | |
| 53185 chr11 manual_curation CDS 318559 318681 . - 0 Parent=GSCOCT00019436001 | |
| 53186 chr11 manual_curation CDS 318760 318936 . - 0 Parent=GSCOCT00019436001 | |
| 53187 chr11 manual_curation CDS 319002 319071 . - 2 Parent=GSCOCT00019436001 | |
| 53188 chr11 manual_curation CDS 319163 319259 . - 1 Parent=GSCOCT00019436001 | |
| 53189 chr11 manual_curation CDS 320645 320720 . - 0 Parent=GSCOCT00019436001 | |
| 53190 chr11 manual_curation CDS 321909 321998 . - 0 Parent=GSCOCT00019436001 | |
| 53191 chr11 manual_curation CDS 323423 323530 . - 0 Parent=GSCOCT00019436001 | |
| 53192 chr11 manual_curation CDS 325100 325138 . - 0 Parent=GSCOCT00019436001 | |
| 53193 chr11 manual_curation CDS 325228 325422 . - 0 Parent=GSCOCT00019436001 | |
| 53194 chr11 manual_curation CDS 325497 325567 . - 1 Parent=GSCOCT00019436001 | |
| 53195 chr11 manual_curation CDS 327190 327341 . - 2 Parent=GSCOCT00019436001 | |
| 53196 chr11 manual_curation CDS 328261 328326 . - 2 Parent=GSCOCT00019436001 | |
| 53197 chr11 manual_curation CDS 329071 329119 . - 1 Parent=GSCOCT00019436001 | |
| 53198 chr11 manual_curation CDS 331525 331615 . - 0 Parent=GSCOCT00019436001 | |
| 53199 chr11 manual_curation CDS 331943 332179 . - 0 Parent=GSCOCT00019436001 | |
| 53200 chr11 manual_curation CDS 332998 333092 . - 1 Parent=GSCOCT00019436001 | |
| 53201 chr11 manual_curation CDS 333209 333333 . - 2 Parent=GSCOCT00019436001 | |
| 53202 chr11 manual_curation CDS 333413 334002 . - 0 Parent=GSCOCT00019436001 | |
| 53203 chr11 manual_curation gene 346299 353452 . + . ID=GSCOCG00019438001;Name=Cc11_g00150 | |
| 53204 chr11 manual_curation mRNA 346299 353452 . + . ID=GSCOCT00019438001;Parent=GSCOCG00019438001;Name=Cc11_g00150 | |
| 53205 chr11 manual_curation polypeptide 346544 353055 . + . ID=GSCOCP00019438001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR012677,PFAM:PF00076,PROFILE:PS50102,SMART:SM00360,SwissProt:Q1PEP5,SwissProt:Q7XTT4,SwissProt:Q9FVQ1,TAIR:AT1G48920.1,TAIR:AT3G18610.1,TAIR:AT4G24770.1,TrEMBL:B9SMB7,TrEMBL:F6HF46,TrEMBL:Q8LNZ4;Derives_from=GSCOCT00019438001;Name=Cc11_g00150;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:Os04g0620700,CC_gene:NUCL2,CC_gene:NUCL1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019438001~ Hypothetical protein~ Os04g0620700~ missing_functional_completeness;original_location=join(273631..273663%2C273757..273811%2C274295..274470%2C274572..274646%2C274727..274858%2C274948..275391%2C276172..276234%2C276317..276400%2C276485..276580%2C276670..276771%2C277157..277237%2C277320..277402%2C277474..277591%2C278577..278668%2C278779..278869%2C278945..279030%2C279495..279832%2C280117..280142);owner=coffea | |
| 53206 chr11 manual_curation exon 346299 346576 . + . Parent=GSCOCT00019438001 | |
| 53207 chr11 manual_curation exon 346670 346724 . + . Parent=GSCOCT00019438001 | |
| 53208 chr11 manual_curation exon 347208 347383 . + . Parent=GSCOCT00019438001 | |
| 53209 chr11 manual_curation exon 347485 347559 . + . Parent=GSCOCT00019438001 | |
| 53210 chr11 manual_curation exon 347640 347771 . + . Parent=GSCOCT00019438001 | |
| 53211 chr11 manual_curation exon 347861 348304 . + . Parent=GSCOCT00019438001 | |
| 53212 chr11 manual_curation exon 349085 349147 . + . Parent=GSCOCT00019438001 | |
| 53213 chr11 manual_curation exon 349230 349313 . + . Parent=GSCOCT00019438001 | |
| 53214 chr11 manual_curation exon 349398 349493 . + . Parent=GSCOCT00019438001 | |
| 53215 chr11 manual_curation exon 349583 349684 . + . Parent=GSCOCT00019438001 | |
| 53216 chr11 manual_curation exon 350070 350150 . + . Parent=GSCOCT00019438001 | |
| 53217 chr11 manual_curation exon 350233 350315 . + . Parent=GSCOCT00019438001 | |
| 53218 chr11 manual_curation exon 350387 350504 . + . Parent=GSCOCT00019438001 | |
| 53219 chr11 manual_curation exon 351490 351581 . + . Parent=GSCOCT00019438001 | |
| 53220 chr11 manual_curation exon 351692 351782 . + . Parent=GSCOCT00019438001 | |
| 53221 chr11 manual_curation exon 351858 351943 . + . Parent=GSCOCT00019438001 | |
| 53222 chr11 manual_curation exon 352408 352745 . + . Parent=GSCOCT00019438001 | |
| 53223 chr11 manual_curation exon 353030 353452 . + . Parent=GSCOCT00019438001 | |
| 53224 chr11 manual_curation CDS 346544 346576 . + 0 Parent=GSCOCT00019438001 | |
| 53225 chr11 manual_curation CDS 346670 346724 . + 0 Parent=GSCOCT00019438001 | |
| 53226 chr11 manual_curation CDS 347208 347383 . + 1 Parent=GSCOCT00019438001 | |
| 53227 chr11 manual_curation CDS 347485 347559 . + 0 Parent=GSCOCT00019438001 | |
| 53228 chr11 manual_curation CDS 347640 347771 . + 0 Parent=GSCOCT00019438001 | |
| 53229 chr11 manual_curation CDS 347861 348304 . + 0 Parent=GSCOCT00019438001 | |
| 53230 chr11 manual_curation CDS 349085 349147 . + 0 Parent=GSCOCT00019438001 | |
| 53231 chr11 manual_curation CDS 349230 349313 . + 0 Parent=GSCOCT00019438001 | |
| 53232 chr11 manual_curation CDS 349398 349493 . + 0 Parent=GSCOCT00019438001 | |
| 53233 chr11 manual_curation CDS 349583 349684 . + 0 Parent=GSCOCT00019438001 | |
| 53234 chr11 manual_curation CDS 350070 350150 . + 0 Parent=GSCOCT00019438001 | |
| 53235 chr11 manual_curation CDS 350233 350315 . + 0 Parent=GSCOCT00019438001 | |
| 53236 chr11 manual_curation CDS 350387 350504 . + 2 Parent=GSCOCT00019438001 | |
| 53237 chr11 manual_curation CDS 351490 351581 . + 0 Parent=GSCOCT00019438001 | |
| 53238 chr11 manual_curation CDS 351692 351782 . + 2 Parent=GSCOCT00019438001 | |
| 53239 chr11 manual_curation CDS 351858 351943 . + 0 Parent=GSCOCT00019438001 | |
| 53240 chr11 manual_curation CDS 352408 352745 . + 2 Parent=GSCOCT00019438001 | |
| 53241 chr11 manual_curation CDS 353030 353055 . + 1 Parent=GSCOCT00019438001 | |
| 53242 chr11 manual_curation gene 367619 369602 . - . ID=GSCOCG00019440001;Name=Cc11_g00160 | |
| 53243 chr11 manual_curation mRNA 367619 369602 . - . ID=GSCOCT00019440001;Parent=GSCOCG00019440001;Name=Cc11_g00160 | |
| 53244 chr11 manual_curation polypeptide 367619 369602 . - . ID=GSCOCP00019440001;Dbxref=GENE3D:G3DSA:1.20.140.40,GENE3D:G3DSA:2.160.20.10,InterPro:IPR000070,InterPro:IPR006501,InterPro:IPR011050,InterPro:IPR012334,InterPro:IPR018040,PFAM:PF01095,PFAM:PF04043,PROSITE:PS00503,PROSITE:PS00800,SMART:SM00856,SUPERFAMILY:SSF101148,SUPERFAMILY:SSF51126,SwissProt:Q43111,SwissProt:Q9FF78,SwissProt:Q9SG77,TAIR:AT1G53840.1,TAIR:AT3G10710.1,TAIR:AT5G04960.1,TIGRFAMs:TIGR01614,TrEMBL:I1KFM7,TrEMBL:I1M0H1,TrEMBL:I1MII6;Derives_from=GSCOCT00019440001;Name=Cc11_g00160;Ontology_term=CC_evidence_code:ISS,GO:0004857,GO:0005618,GO:0030599,GO:0042545,CC_EC_number:3.1.1.11,PRODUCT:Putative pectinesterase/pectinesterase inhibitor 24,CC_functional_completeness:complete,CC_gene:PME24,CC_gene:PME46,CC_gene:MPE3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019440001~ Putative pectinesterase/pectinesterase inhibitor 24~ PME24~ complete;original_location=complement(join(295645..296689%2C294706..295385));owner=coffea | |
| 53245 chr11 manual_curation exon 367619 368298 . - . Parent=GSCOCT00019440001 | |
| 53246 chr11 manual_curation exon 368558 369602 . - . Parent=GSCOCT00019440001 | |
| 53247 chr11 manual_curation CDS 367619 368298 . - 1 Parent=GSCOCT00019440001 | |
| 53248 chr11 manual_curation CDS 368558 369602 . - 0 Parent=GSCOCT00019440001 | |
| 53249 chr11 manual_curation gene 375534 378908 . - . ID=GSCOCG00019441001;Name=Cc11_g00170 | |
| 53250 chr11 manual_curation mRNA 375534 378908 . - . ID=GSCOCT00019441001;Parent=GSCOCG00019441001;Name=Cc11_g00170 | |
| 53251 chr11 manual_curation polypeptide 375534 378908 . - . ID=GSCOCP00019441001;Dbxref=GENE3D:G3DSA:1.50.10.10,InterPro:IPR001701,InterPro:IPR008928,InterPro:IPR012341,InterPro:IPR018221,InterPro:IPR019028,PANTHER:PTHR22298:SF3,PFAM:PF00759,PFAM:PF09478,PROSITE:PS00592,SUPERFAMILY:SSF48208,SwissProt:A2XYW8,SwissProt:Q0J930,SwissProt:Q9M995,TAIR:AT1G48930.1,TAIR:AT1G64390.1,TAIR:AT4G11050.1,TrEMBL:B9HGM2,TrEMBL:B9SMB6,TrEMBL:D7T9G6;Derives_from=GSCOCT00019441001;Name=Cc11_g00170;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005576,GO:0005975,GO:0030246,CC_EC_number:3.2.1.4,PRODUCT:Endoglucanase 5,CC_functional_completeness:complete,CC_gene:At1g48930,CC_gene:GLU6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019441001~ Endoglucanase 5~ At1g48930~ complete;original_location=complement(join(305783..305995%2C305412..305624%2C305114..305314%2C304919..305005%2C304660..304824%2C304402..304525%2C304106..304173%2C304027..304053%2C303567..303900%2C303376..303420%2C302621..302937));owner=coffea | |
| 53252 chr11 manual_curation exon 375534 375850 . - . Parent=GSCOCT00019441001 | |
| 53253 chr11 manual_curation exon 376289 376333 . - . Parent=GSCOCT00019441001 | |
| 53254 chr11 manual_curation exon 376480 376813 . - . Parent=GSCOCT00019441001 | |
| 53255 chr11 manual_curation exon 376940 376966 . - . Parent=GSCOCT00019441001 | |
| 53256 chr11 manual_curation exon 377019 377086 . - . Parent=GSCOCT00019441001 | |
| 53257 chr11 manual_curation exon 377315 377438 . - . Parent=GSCOCT00019441001 | |
| 53258 chr11 manual_curation exon 377573 377737 . - . Parent=GSCOCT00019441001 | |
| 53259 chr11 manual_curation exon 377832 377918 . - . Parent=GSCOCT00019441001 | |
| 53260 chr11 manual_curation exon 378027 378227 . - . Parent=GSCOCT00019441001 | |
| 53261 chr11 manual_curation exon 378325 378537 . - . Parent=GSCOCT00019441001 | |
| 53262 chr11 manual_curation exon 378696 378908 . - . Parent=GSCOCT00019441001 | |
| 53263 chr11 manual_curation CDS 375534 375850 . - 1 Parent=GSCOCT00019441001 | |
| 53264 chr11 manual_curation CDS 376289 376333 . - 1 Parent=GSCOCT00019441001 | |
| 53265 chr11 manual_curation CDS 376480 376813 . - 0 Parent=GSCOCT00019441001 | |
| 53266 chr11 manual_curation CDS 376940 376966 . - 0 Parent=GSCOCT00019441001 | |
| 53267 chr11 manual_curation CDS 377019 377086 . - 1 Parent=GSCOCT00019441001 | |
| 53268 chr11 manual_curation CDS 377315 377438 . - 0 Parent=GSCOCT00019441001 | |
| 53269 chr11 manual_curation CDS 377573 377737 . - 0 Parent=GSCOCT00019441001 | |
| 53270 chr11 manual_curation CDS 377832 377918 . - 0 Parent=GSCOCT00019441001 | |
| 53271 chr11 manual_curation CDS 378027 378227 . - 0 Parent=GSCOCT00019441001 | |
| 53272 chr11 manual_curation CDS 378325 378537 . - 0 Parent=GSCOCT00019441001 | |
| 53273 chr11 manual_curation CDS 378696 378908 . - 0 Parent=GSCOCT00019441001 | |
| 53274 chr11 manual_curation gene 390922 398947 . + . ID=GSCOCG00019442001;Name=Cc11_g00180 | |
| 53275 chr11 manual_curation mRNA 390922 398947 . + . ID=GSCOCT00019442001;Parent=GSCOCG00019442001;Name=Cc11_g00180 | |
| 53276 chr11 manual_curation polypeptide 391468 398577 . + . ID=GSCOCP00019442001;Dbxref=InterPro:IPR001806,InterPro:IPR002078,InterPro:IPR003579,InterPro:IPR013753,InterPro:IPR020851,PFAM:PF00071,PRINTS:PR00449,PROFILE:PS51419,PROSITE:PS00675,SMART:SM00175,SwissProt:Q5HYI8,SwissProt:Q6TNS7,SwissProt:Q9C5J9,TAIR:AT1G43890.1,TAIR:AT5G09910.1,TAIR:AT5G64813.1,TrEMBL:B9H5K6,TrEMBL:B9HG29,TrEMBL:B9T5U9;Derives_from=GSCOCT00019442001;Name=Cc11_g00180;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0005525,GO:0005622,GO:0007264,GO:0008134,GO:0015031,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterized GTP-binding protein At5g64813,CC_functional_completeness:complete,CC_gene:At5g64813,CC_gene:RABL3,CC_gene:rabl3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019442001~ Uncharacterized GTP-binding protein At5g64813~ At5g64813~ complete;original_location=join(318555..318696%2C320185..320276%2C320363..320504%2C321813..322117%2C323502..323555%2C323638..323765%2C325472..325664);owner=coffea | |
| 53277 chr11 manual_curation exon 390922 391609 . + . Parent=GSCOCT00019442001 | |
| 53278 chr11 manual_curation exon 393098 393189 . + . Parent=GSCOCT00019442001 | |
| 53279 chr11 manual_curation exon 393276 393417 . + . Parent=GSCOCT00019442001 | |
| 53280 chr11 manual_curation exon 394726 395030 . + . Parent=GSCOCT00019442001 | |
| 53281 chr11 manual_curation exon 396415 396468 . + . Parent=GSCOCT00019442001 | |
| 53282 chr11 manual_curation exon 396551 396678 . + . Parent=GSCOCT00019442001 | |
| 53283 chr11 manual_curation exon 398385 398947 . + . Parent=GSCOCT00019442001 | |
| 53284 chr11 manual_curation CDS 391468 391609 . + 0 Parent=GSCOCT00019442001 | |
| 53285 chr11 manual_curation CDS 393098 393189 . + 1 Parent=GSCOCT00019442001 | |
| 53286 chr11 manual_curation CDS 393276 393417 . + 0 Parent=GSCOCT00019442001 | |
| 53287 chr11 manual_curation CDS 394726 395030 . + 1 Parent=GSCOCT00019442001 | |
| 53288 chr11 manual_curation CDS 396415 396468 . + 0 Parent=GSCOCT00019442001 | |
| 53289 chr11 manual_curation CDS 396551 396678 . + 0 Parent=GSCOCT00019442001 | |
| 53290 chr11 manual_curation CDS 398385 398577 . + 2 Parent=GSCOCT00019442001 | |
| 53291 chr11 manual_curation gene 399417 412731 . - . ID=GSCOCG00019443001;Name=Cc11_g00190 | |
| 53292 chr11 manual_curation mRNA 399417 412731 . - . ID=GSCOCT00019443001;Parent=GSCOCG00019443001;Name=Cc11_g00190 | |
| 53293 chr11 manual_curation polypeptide 404031 412349 . - . ID=GSCOCP00019443001;Dbxref=InterPro:IPR001594,PFAM:PF01529,PROFILE:PS50216,SwissProt:Q4R7E2,SwissProt:Q58CU4,SwissProt:Q9LIH7,TAIR:AT3G09320.1,TAIR:AT3G18620.1,TAIR:AT5G04270.1,TrEMBL:B9HGM8,TrEMBL:D7TAC1,TrEMBL:G7JNH1;Derives_from=GSCOCT00019443001;Name=Cc11_g00190;Ontology_term=CC_evidence_code:ISS,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Probable S-acyltransferase At3g18620,CC_functional_completeness:complete,CC_gene:At3g18620,CC_gene:ZDHHC16;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019443001~ Probable S-acyltransferase At3g18620~ At3g18620~ complete;original_location=complement(join(339368..339436%2C335460..335682%2C332987..333285%2C331118..331600));owner=coffea | |
| 53294 chr11 manual_curation exon 399417 399638 . - . Parent=GSCOCT00019443001 | |
| 53295 chr11 manual_curation exon 404021 404513 . - . Parent=GSCOCT00019443001 | |
| 53296 chr11 manual_curation exon 405900 406198 . - . Parent=GSCOCT00019443001 | |
| 53297 chr11 manual_curation exon 408373 408595 . - . Parent=GSCOCT00019443001 | |
| 53298 chr11 manual_curation exon 412281 412731 . - . Parent=GSCOCT00019443001 | |
| 53299 chr11 manual_curation CDS 404031 404513 . - 0 Parent=GSCOCT00019443001 | |
| 53300 chr11 manual_curation CDS 405900 406198 . - 1 Parent=GSCOCT00019443001 | |
| 53301 chr11 manual_curation CDS 408373 408595 . - 0 Parent=GSCOCT00019443001 | |
| 53302 chr11 manual_curation CDS 412281 412349 . - 0 Parent=GSCOCT00019443001 | |
| 53303 chr11 manual_curation gene 428330 434596 . + . ID=GSCOCG00019445001;Name=Cc11_g00200 | |
| 53304 chr11 manual_curation mRNA 428330 434596 . + . ID=GSCOCT00019445001;Parent=GSCOCG00019445001;Name=Cc11_g00200 | |
| 53305 chr11 manual_curation polypeptide 428661 434098 . + . ID=GSCOCP00019445001;Dbxref=InterPro:IPR021420,PFAM:PF11267,TAIR:AT3G19900.1,TrEMBL:B9HY12,TrEMBL:F6HGH7,TrEMBL:I1LIW2;Derives_from=GSCOCT00019445001;Name=Cc11_g00200;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019445001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=join(355748..356029%2C357065..357199%2C359309..359365%2C359819..359959%2C361120..361185);owner=coffea | |
| 53306 chr11 manual_curation exon 428330 428942 . + . Parent=GSCOCT00019445001 | |
| 53307 chr11 manual_curation exon 429978 430112 . + . Parent=GSCOCT00019445001 | |
| 53308 chr11 manual_curation exon 432222 432278 . + . Parent=GSCOCT00019445001 | |
| 53309 chr11 manual_curation exon 432732 432872 . + . Parent=GSCOCT00019445001 | |
| 53310 chr11 manual_curation exon 434033 434596 . + . Parent=GSCOCT00019445001 | |
| 53311 chr11 manual_curation CDS 428661 428942 . + 0 Parent=GSCOCT00019445001 | |
| 53312 chr11 manual_curation CDS 429978 430112 . + 0 Parent=GSCOCT00019445001 | |
| 53313 chr11 manual_curation CDS 432222 432278 . + 0 Parent=GSCOCT00019445001 | |
| 53314 chr11 manual_curation CDS 432732 432872 . + 0 Parent=GSCOCT00019445001 | |
| 53315 chr11 manual_curation CDS 434033 434098 . + 0 Parent=GSCOCT00019445001 | |
| 53316 chr11 manual_curation gene 434832 438392 . - . ID=GSCOCG00019446001;Name=Cc11_g00210 | |
| 53317 chr11 manual_curation mRNA 434832 438392 . - . ID=GSCOCT00019446001;Parent=GSCOCG00019446001;Name=Cc11_g00210 | |
| 53318 chr11 manual_curation polypeptide 434832 438159 . - . ID=GSCOCP00019446001;Dbxref=InterPro:IPR000210,InterPro:IPR004249,InterPro:IPR011333,PFAM:PF03000,PROFILE:PS50097,SUPERFAMILY:SSF54695,SwissProt:Q8RXR6,SwissProt:Q9C5J4,SwissProt:Q9LT24,TAIR:AT1G50280.1,TAIR:AT3G19850.1,TAIR:AT3G22104.1,TrEMBL:B9HY24,TrEMBL:B9RPY2,TrEMBL:F6HFZ6;Derives_from=GSCOCT00019446001;Name=Cc11_g00210;Ontology_term=CC_evidence_code:ISS,GO:0004871,GO:0005515,GO:0009416,CC_EC_number:missing_EC_number,PRODUCT:BTB/POZ domain-containing protein At3g19850,CC_functional_completeness:complete,CC_gene:At3g19850,CC_gene:At1g50280,CC_gene:At3g22104;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019446001~ BTB/POZ domain-containing protein At3g19850~ At3g19850~ complete;original_location=complement(join(365184..365246%2C363966..365081%2C362201..362374%2C361919..362098));owner=coffea | |
| 53319 chr11 manual_curation exon 434832 435011 . - . Parent=GSCOCT00019446001 | |
| 53320 chr11 manual_curation exon 435114 435287 . - . Parent=GSCOCT00019446001 | |
| 53321 chr11 manual_curation exon 436879 437994 . - . Parent=GSCOCT00019446001 | |
| 53322 chr11 manual_curation exon 438097 438392 . - . Parent=GSCOCT00019446001 | |
| 53323 chr11 manual_curation CDS 434832 435011 . - 0 Parent=GSCOCT00019446001 | |
| 53324 chr11 manual_curation CDS 435114 435287 . - 0 Parent=GSCOCT00019446001 | |
| 53325 chr11 manual_curation CDS 436879 437994 . - 0 Parent=GSCOCT00019446001 | |
| 53326 chr11 manual_curation CDS 438097 438159 . - 0 Parent=GSCOCT00019446001 | |
| 53327 chr11 manual_curation gene 442296 450206 . + . ID=GSCOCG00019447001;Name=Cc11_g00220 | |
| 53328 chr11 manual_curation mRNA 442296 450206 . + . ID=GSCOCT00019447001;Parent=GSCOCG00019447001;Name=Cc11_g00220 | |
| 53329 chr11 manual_curation polypeptide 442838 448735 . + . ID=GSCOCP00019447001;Dbxref=InterPro:IPR008811,InterPro:IPR017853,PFAM:PF05691,SUPERFAMILY:SSF51445,SwissProt:Q84VX0,SwissProt:Q8RX87,SwissProt:Q94A08,TAIR:AT1G55740.1,TAIR:AT3G57520.1,TAIR:AT5G20250.4,TrEMBL:B9N3V8,TrEMBL:B9SGV5,TrEMBL:F6HJU7;Derives_from=GSCOCT00019447001;Name=Cc11_g00220;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.4.1.67,PRODUCT:Putative Probable galactinol--sucrose galactosyltransferase 2,CC_functional_completeness:complete,CC_gene:RFS2,CC_gene:RFS1,CC_gene:RFS6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019447001~ Putative Probable galactinol--sucrose galactosyltransferase 2~ RFS2~ complete;original_location=join(369925..370373%2C370785..371026%2C371222..371312%2C371578..371638%2C371720..371811%2C372220..372327%2C372408..372533%2C372755..373165%2C373412..373553%2C373644..373711%2C374752..374886%2C374972..375183%2C375363..375451%2C375541..375822);owner=coffea | |
| 53330 chr11 manual_curation exon 442296 443286 . + . Parent=GSCOCT00019447001 | |
| 53331 chr11 manual_curation exon 443698 443939 . + . Parent=GSCOCT00019447001 | |
| 53332 chr11 manual_curation exon 444135 444225 . + . Parent=GSCOCT00019447001 | |
| 53333 chr11 manual_curation exon 444491 444551 . + . Parent=GSCOCT00019447001 | |
| 53334 chr11 manual_curation exon 444633 444724 . + . Parent=GSCOCT00019447001 | |
| 53335 chr11 manual_curation exon 445133 445240 . + . Parent=GSCOCT00019447001 | |
| 53336 chr11 manual_curation exon 445321 445446 . + . Parent=GSCOCT00019447001 | |
| 53337 chr11 manual_curation exon 445668 446078 . + . Parent=GSCOCT00019447001 | |
| 53338 chr11 manual_curation exon 446325 446466 . + . Parent=GSCOCT00019447001 | |
| 53339 chr11 manual_curation exon 446557 446624 . + . Parent=GSCOCT00019447001 | |
| 53340 chr11 manual_curation exon 447665 447799 . + . Parent=GSCOCT00019447001 | |
| 53341 chr11 manual_curation exon 447885 448096 . + . Parent=GSCOCT00019447001 | |
| 53342 chr11 manual_curation exon 448276 448364 . + . Parent=GSCOCT00019447001 | |
| 53343 chr11 manual_curation exon 448454 450206 . + . Parent=GSCOCT00019447001 | |
| 53344 chr11 manual_curation CDS 442838 443286 . + 0 Parent=GSCOCT00019447001 | |
| 53345 chr11 manual_curation CDS 443698 443939 . + 2 Parent=GSCOCT00019447001 | |
| 53346 chr11 manual_curation CDS 444135 444225 . + 1 Parent=GSCOCT00019447001 | |
| 53347 chr11 manual_curation CDS 444491 444551 . + 2 Parent=GSCOCT00019447001 | |
| 53348 chr11 manual_curation CDS 444633 444724 . + 0 Parent=GSCOCT00019447001 | |
| 53349 chr11 manual_curation CDS 445133 445240 . + 2 Parent=GSCOCT00019447001 | |
| 53350 chr11 manual_curation CDS 445321 445446 . + 2 Parent=GSCOCT00019447001 | |
| 53351 chr11 manual_curation CDS 445668 446078 . + 2 Parent=GSCOCT00019447001 | |
| 53352 chr11 manual_curation CDS 446325 446466 . + 2 Parent=GSCOCT00019447001 | |
| 53353 chr11 manual_curation CDS 446557 446624 . + 0 Parent=GSCOCT00019447001 | |
| 53354 chr11 manual_curation CDS 447665 447799 . + 2 Parent=GSCOCT00019447001 | |
| 53355 chr11 manual_curation CDS 447885 448096 . + 2 Parent=GSCOCT00019447001 | |
| 53356 chr11 manual_curation CDS 448276 448364 . + 1 Parent=GSCOCT00019447001 | |
| 53357 chr11 manual_curation CDS 448454 448735 . + 0 Parent=GSCOCT00019447001 | |
| 53358 chr11 manual_curation gene 450684 457402 . - . ID=GSCOCG00019448001;Name=Cc11_g00230 | |
| 53359 chr11 manual_curation mRNA 450684 457402 . - . ID=GSCOCT00019448001;Parent=GSCOCG00019448001;Name=Cc11_g00230 | |
| 53360 chr11 manual_curation polypeptide 451044 457143 . - . ID=GSCOCP00019448001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR019781,PFAM:PF00400,SMART:SM00320,SUPERFAMILY:SSF50978,TAIR:AT3G49400.1,TrEMBL:A5ARR6,TrEMBL:B9I219,TrEMBL:G7I991;Derives_from=GSCOCT00019448001;Name=Cc11_g00230;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Transducin/WD40 repeat-like superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019448001~ Putative Transducin/WD40 repeat-like superfamily protein~ unknown_gene~ complete;original_location=complement(join(384111..384230%2C383929..384013%2C383682..383784%2C383459..383543%2C382902..382988%2C382650..382724%2C382006..382466%2C381563..381644%2C381287..381463%2C381166..381219%2C380888..380980%2C380743..380808%2C379970..380016%2C379035..379736%2C378131..378512));owner=coffea | |
| 53361 chr11 manual_curation exon 450684 451425 . - . Parent=GSCOCT00019448001 | |
| 53362 chr11 manual_curation exon 451948 452649 . - . Parent=GSCOCT00019448001 | |
| 53363 chr11 manual_curation exon 452883 452929 . - . Parent=GSCOCT00019448001 | |
| 53364 chr11 manual_curation exon 453656 453721 . - . Parent=GSCOCT00019448001 | |
| 53365 chr11 manual_curation exon 453801 453893 . - . Parent=GSCOCT00019448001 | |
| 53366 chr11 manual_curation exon 454079 454132 . - . Parent=GSCOCT00019448001 | |
| 53367 chr11 manual_curation exon 454200 454376 . - . Parent=GSCOCT00019448001 | |
| 53368 chr11 manual_curation exon 454476 454557 . - . Parent=GSCOCT00019448001 | |
| 53369 chr11 manual_curation exon 454919 455379 . - . Parent=GSCOCT00019448001 | |
| 53370 chr11 manual_curation exon 455563 455637 . - . Parent=GSCOCT00019448001 | |
| 53371 chr11 manual_curation exon 455815 455901 . - . Parent=GSCOCT00019448001 | |
| 53372 chr11 manual_curation exon 456372 456456 . - . Parent=GSCOCT00019448001 | |
| 53373 chr11 manual_curation exon 456595 456697 . - . Parent=GSCOCT00019448001 | |
| 53374 chr11 manual_curation exon 456842 456926 . - . Parent=GSCOCT00019448001 | |
| 53375 chr11 manual_curation exon 457024 457402 . - . Parent=GSCOCT00019448001 | |
| 53376 chr11 manual_curation CDS 451044 451425 . - 2 Parent=GSCOCT00019448001 | |
| 53377 chr11 manual_curation CDS 451948 452649 . - 2 Parent=GSCOCT00019448001 | |
| 53378 chr11 manual_curation CDS 452883 452929 . - 0 Parent=GSCOCT00019448001 | |
| 53379 chr11 manual_curation CDS 453656 453721 . - 0 Parent=GSCOCT00019448001 | |
| 53380 chr11 manual_curation CDS 453801 453893 . - 0 Parent=GSCOCT00019448001 | |
| 53381 chr11 manual_curation CDS 454079 454132 . - 0 Parent=GSCOCT00019448001 | |
| 53382 chr11 manual_curation CDS 454200 454376 . - 0 Parent=GSCOCT00019448001 | |
| 53383 chr11 manual_curation CDS 454476 454557 . - 2 Parent=GSCOCT00019448001 | |
| 53384 chr11 manual_curation CDS 454919 455379 . - 0 Parent=GSCOCT00019448001 | |
| 53385 chr11 manual_curation CDS 455563 455637 . - 0 Parent=GSCOCT00019448001 | |
| 53386 chr11 manual_curation CDS 455815 455901 . - 0 Parent=GSCOCT00019448001 | |
| 53387 chr11 manual_curation CDS 456372 456456 . - 2 Parent=GSCOCT00019448001 | |
| 53388 chr11 manual_curation CDS 456595 456697 . - 1 Parent=GSCOCT00019448001 | |
| 53389 chr11 manual_curation CDS 456842 456926 . - 0 Parent=GSCOCT00019448001 | |
| 53390 chr11 manual_curation CDS 457024 457143 . - 0 Parent=GSCOCT00019448001 | |
| 53391 chr11 manual_curation gene 562679 564363 . + . ID=GSCOCG00019451001;Name=Cc11_g00240 | |
| 53392 chr11 manual_curation mRNA 562679 564363 . + . ID=GSCOCT00019451001;Parent=GSCOCG00019451001;Name=Cc11_g00240 | |
| 53393 chr11 manual_curation polypeptide 562868 564025 . + . ID=GSCOCP00019451001;Dbxref=GENE3D:G3DSA:3.30.230.10,InterPro:IPR000870,InterPro:IPR006203,InterPro:IPR006204,InterPro:IPR013750,InterPro:IPR014721,InterPro:IPR020568,PFAM:PF00288,PFAM:PF08544,PRINTS:PR00958,PROSITE:PS00627,SUPERFAMILY:SSF54211,SwissProt:A1BJF6,SwissProt:A4SGN0,SwissProt:Q8KAW7,TAIR:AT2G17265.1,TAIR:AT4G35295.1,TIGRFAMs:TIGR00191,TrEMBL:A5B5G1,TrEMBL:B9RVC9,TrEMBL:F6HYK1;Derives_from=GSCOCT00019451001;Name=Cc11_g00240;Ontology_term=CC_evidence_code:ISS,GO:0004413,GO:0005524,GO:0006566,GO:0016301,GO:0016310,CC_EC_number:2.7.1.39,PRODUCT:Putative Homoserine kinase,CC_functional_completeness:complete,CC_gene:thrB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019451001~ Putative Homoserine kinase~ thrB~ complete;original_location=489955..491112;owner=coffea | |
| 53394 chr11 manual_curation exon 562679 564363 . + . Parent=GSCOCT00019451001 | |
| 53395 chr11 manual_curation CDS 562868 564025 . + 0 Parent=GSCOCT00019451001 | |
| 53396 chr11 manual_curation gene 570123 575834 . + . ID=GSCOCG00019453001;Name=Cc11_g00250 | |
| 53397 chr11 manual_curation mRNA 570123 575834 . + . ID=GSCOCT00019453001;Parent=GSCOCG00019453001;Name=Cc11_g00250 | |
| 53398 chr11 manual_curation polypeptide 571176 575544 . + . ID=GSCOCP00019453001;Dbxref=InterPro:IPR001320,InterPro:IPR001638,InterPro:IPR001828,InterPro:IPR015683,InterPro:IPR017103,PANTHER:PTHR18966,PFAM:PF00060,PFAM:PF00497,PFAM:PF01094,PIR:PIRSF037090,SMART:SM00079,SwissProt:Q7XJL2,SwissProt:Q93YT1,SwissProt:Q9C8E7,TAIR:AT1G42540.1,TAIR:AT2G17260.1,TAIR:AT4G35290.2,TrEMBL:B9HPN5,TrEMBL:B9S3N7,TrEMBL:F6I0R2;Derives_from=GSCOCT00019453001;Name=Cc11_g00250;Ontology_term=CC_evidence_code:ISS,GO:0004970,GO:0005215,GO:0005234,GO:0006810,GO:0016020,GO:0030288,CC_EC_number:missing_EC_number,PRODUCT:Glutamate receptor 3.2,CC_functional_completeness:complete,CC_gene:GLR3.2,CC_gene:GLR3.1,CC_gene:GLR3.3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019453001~ Glutamate receptor 3.2~ GLR3.2~ complete;original_location=join(498263..498512%2C498951..500290%2C500440..500717%2C501104..501135%2C501222..501616%2C502221..502631);owner=coffea | |
| 53399 chr11 manual_curation exon 570123 570273 . + . Parent=GSCOCT00019453001 | |
| 53400 chr11 manual_curation exon 571088 571425 . + . Parent=GSCOCT00019453001 | |
| 53401 chr11 manual_curation exon 571864 573203 . + . Parent=GSCOCT00019453001 | |
| 53402 chr11 manual_curation exon 573353 573630 . + . Parent=GSCOCT00019453001 | |
| 53403 chr11 manual_curation exon 574017 574048 . + . Parent=GSCOCT00019453001 | |
| 53404 chr11 manual_curation exon 574135 574529 . + . Parent=GSCOCT00019453001 | |
| 53405 chr11 manual_curation exon 575134 575834 . + . Parent=GSCOCT00019453001 | |
| 53406 chr11 manual_curation CDS 571176 571425 . + 0 Parent=GSCOCT00019453001 | |
| 53407 chr11 manual_curation CDS 571864 573203 . + 1 Parent=GSCOCT00019453001 | |
| 53408 chr11 manual_curation CDS 573353 573630 . + 0 Parent=GSCOCT00019453001 | |
| 53409 chr11 manual_curation CDS 574017 574048 . + 2 Parent=GSCOCT00019453001 | |
| 53410 chr11 manual_curation CDS 574135 574529 . + 1 Parent=GSCOCT00019453001 | |
| 53411 chr11 manual_curation CDS 575134 575544 . + 0 Parent=GSCOCT00019453001 | |
| 53412 chr11 manual_curation gene 576185 594623 . - . ID=GSCOCG00019454001;Name=Cc11_g00260 | |
| 53413 chr11 manual_curation mRNA 576185 594623 . - . ID=GSCOCT00019454001;Parent=GSCOCG00019454001;Name=Cc11_g00260 | |
| 53414 chr11 manual_curation polypeptide 577176 593378 . - . ID=GSCOCP00019454001;Dbxref=GENE3D:G3DSA:1.20.1020.10,InterPro:IPR000197,InterPro:IPR000433,InterPro:IPR011011,InterPro:IPR013178,InterPro:IPR019786,InterPro:IPR019787,PFAM:PF00569,PFAM:PF00628,PFAM:PF02135,PFAM:PF08214,PROFILE:PS50134,PROFILE:PS50135,PROSITE:PS01357,PROSITE:PS01359,SMART:SM00291,SMART:SM00551,SUPERFAMILY:SSF57903,SUPERFAMILY:SSF57933,SwissProt:Q6YXY2,SwissProt:Q9C5X9,SwissProt:Q9FWQ5,TAIR:AT1G16710.1,TAIR:AT1G79000.2,TAIR:AT3G12980.1,TrEMBL:A5B4P5,TrEMBL:B9RHR9,TrEMBL:F6GYH3;Derives_from=GSCOCT00019454001;Name=Cc11_g00260;Ontology_term=CC_evidence_code:ISS,GO:0003712,GO:0004402,GO:0005634,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Histone acetyltransferase HAC12,CC_functional_completeness:complete,CC_gene:HAC12,CC_gene:HAC1,CC_gene:Os02g0137500;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019454001~ Histone acetyltransferase HAC12~ HAC12~ complete;original_location=complement(join(520346..520465%2C519348..519496%2C518995..519106%2C518430..518730%2C517824..518342%2C515733..517573%2C511383..511679%2C511004..511282%2C510062..510190%2C509215..509415%2C508976..509118%2C508557..508869%2C508005..508144%2C506552..506630%2C506051..506443%2C504490..504707%2C504263..504377));owner=coffea | |
| 53415 chr11 manual_curation exon 594435 594623 . - . Parent=GSCOCT00019454001 | |
| 53416 chr11 manual_curation exon 576185 577290 . - . Parent=GSCOCT00019454001 | |
| 53417 chr11 manual_curation exon 577403 577620 . - . Parent=GSCOCT00019454001 | |
| 53418 chr11 manual_curation exon 578964 579356 . - . Parent=GSCOCT00019454001 | |
| 53419 chr11 manual_curation exon 579465 579543 . - . Parent=GSCOCT00019454001 | |
| 53420 chr11 manual_curation exon 580918 581057 . - . Parent=GSCOCT00019454001 | |
| 53421 chr11 manual_curation exon 581470 581782 . - . Parent=GSCOCT00019454001 | |
| 53422 chr11 manual_curation exon 581889 582031 . - . Parent=GSCOCT00019454001 | |
| 53423 chr11 manual_curation exon 582128 582328 . - . Parent=GSCOCT00019454001 | |
| 53424 chr11 manual_curation exon 582975 583103 . - . Parent=GSCOCT00019454001 | |
| 53425 chr11 manual_curation exon 583917 584195 . - . Parent=GSCOCT00019454001 | |
| 53426 chr11 manual_curation exon 584296 584592 . - . Parent=GSCOCT00019454001 | |
| 53427 chr11 manual_curation exon 588646 590486 . - . Parent=GSCOCT00019454001 | |
| 53428 chr11 manual_curation exon 590737 591255 . - . Parent=GSCOCT00019454001 | |
| 53429 chr11 manual_curation exon 591343 591643 . - . Parent=GSCOCT00019454001 | |
| 53430 chr11 manual_curation exon 591908 592019 . - . Parent=GSCOCT00019454001 | |
| 53431 chr11 manual_curation exon 592261 592409 . - . Parent=GSCOCT00019454001 | |
| 53432 chr11 manual_curation exon 593259 593517 . - . Parent=GSCOCT00019454001 | |
| 53433 chr11 manual_curation CDS 577176 577290 . - 2 Parent=GSCOCT00019454001 | |
| 53434 chr11 manual_curation CDS 577403 577620 . - 0 Parent=GSCOCT00019454001 | |
| 53435 chr11 manual_curation CDS 578964 579356 . - 0 Parent=GSCOCT00019454001 | |
| 53436 chr11 manual_curation CDS 579465 579543 . - 2 Parent=GSCOCT00019454001 | |
| 53437 chr11 manual_curation CDS 580918 581057 . - 0 Parent=GSCOCT00019454001 | |
| 53438 chr11 manual_curation CDS 581470 581782 . - 2 Parent=GSCOCT00019454001 | |
| 53439 chr11 manual_curation CDS 581889 582031 . - 0 Parent=GSCOCT00019454001 | |
| 53440 chr11 manual_curation CDS 582128 582328 . - 0 Parent=GSCOCT00019454001 | |
| 53441 chr11 manual_curation CDS 582975 583103 . - 0 Parent=GSCOCT00019454001 | |
| 53442 chr11 manual_curation CDS 583917 584195 . - 0 Parent=GSCOCT00019454001 | |
| 53443 chr11 manual_curation CDS 584296 584592 . - 0 Parent=GSCOCT00019454001 | |
| 53444 chr11 manual_curation CDS 588646 590486 . - 1 Parent=GSCOCT00019454001 | |
| 53445 chr11 manual_curation CDS 590737 591255 . - 1 Parent=GSCOCT00019454001 | |
| 53446 chr11 manual_curation CDS 591343 591643 . - 0 Parent=GSCOCT00019454001 | |
| 53447 chr11 manual_curation CDS 591908 592019 . - 2 Parent=GSCOCT00019454001 | |
| 53448 chr11 manual_curation CDS 592261 592409 . - 0 Parent=GSCOCT00019454001 | |
| 53449 chr11 manual_curation CDS 593259 593378 . - 0 Parent=GSCOCT00019454001 | |
| 53450 chr11 manual_curation gene 599977 601794 . - . ID=GSCOCG00019456001;Name=Cc11_g00270 | |
| 53451 chr11 manual_curation mRNA 599977 601794 . - . ID=GSCOCT00019456001;Parent=GSCOCG00019456001;Name=Cc11_g00270 | |
| 53452 chr11 manual_curation polypeptide 599977 601794 . - . ID=GSCOCP00019456001;Dbxref=InterPro:IPR000449,InterPro:IPR003593,InterPro:IPR003959,InterPro:IPR009060,InterPro:IPR015940,InterPro:IPR021886,PFAM:PF00004,PFAM:PF00627,PFAM:PF12002,PROFILE:PS50030,SMART:SM00165,SMART:SM00382,SUPERFAMILY:SSF46934,SwissProt:Q8CG07,SwissProt:Q91XU0,SwissProt:Q96S55,TAIR:AT1G24290.1,TrEMBL:B9HZJ7,TrEMBL:D7KAP5,TrEMBL:F6HTQ0;Derives_from=GSCOCT00019456001;Name=Cc11_g00270;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0017111,CC_EC_number:missing_EC_number,PRODUCT:AAA-type ATPase family protein,CC_functional_completeness:complete,CC_gene:Wrnip1,CC_gene:WRNIP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019456001~ AAA-type ATPase family protein~ Wrnip1~ complete;original_location=complement(527064..528881);owner=coffea | |
| 53453 chr11 manual_curation exon 599977 601794 . - . Parent=GSCOCT00019456001 | |
| 53454 chr11 manual_curation CDS 599977 601794 . - 0 Parent=GSCOCT00019456001 | |
| 53455 chr11 manual_curation gene 603971 628674 . - . ID=GSCOCG00019457001;Name=Cc11_g00280 | |
| 53456 chr11 manual_curation mRNA 603971 628674 . - . ID=GSCOCT00019457001;Parent=GSCOCG00019457001;Name=Cc11_g00280 | |
| 53457 chr11 manual_curation polypeptide 604427 628674 . - . ID=GSCOCP00019457001;Dbxref=InterPro:IPR009543,PFAM:PF06650,SwissProt:Q54LB8,SwissProt:Q55EI3,SwissProt:Q55FG3,TAIR:AT1G48090.1,TAIR:AT5G24740.1,TrEMBL:B9RXC4,TrEMBL:G7IJW3,TrEMBL:I1M061;Derives_from=GSCOCT00019457001;Name=Cc11_g00280;Ontology_term=CC_evidence_code:ISS,GO:0008104,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of unknown function (DUF1162),CC_functional_completeness:fragment,CC_gene:tipC,CC_gene:vps13A,CC_gene:vps13E;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019457001~ Putative Protein of unknown function (DUF1162)~ tipC~ fragment;original_location=complement(join(555714..555761%2C555526..555584%2C555253..555355%2C552757..552945%2C552511..552627%2C549321..549604%2C548063..548201%2C547566..548011%2C546631..547064%2C545347..546530%2C544955..545083%2C544708..544863%2C542195..542809%2C542038..542109%2C541486..541944%2C541210..541393%2C540356..541118%2C540112..540228%2C539308..539581%2C538449..538562%2C538276..538359%2C537397..537447%2C537128..537307%2C536741..537033%2C536292..536624%2C536138..536201%2C535883..536029%2C533965..534069%2C533783..533893%2C533601..533705%2C532360..532429%2C531514..532214));owner=coffea | |
| 53458 chr11 manual_curation exon 603971 605127 . - . Parent=GSCOCT00019457001 | |
| 53459 chr11 manual_curation exon 605273 605342 . - . Parent=GSCOCT00019457001 | |
| 53460 chr11 manual_curation exon 606514 606618 . - . Parent=GSCOCT00019457001 | |
| 53461 chr11 manual_curation exon 606696 606806 . - . Parent=GSCOCT00019457001 | |
| 53462 chr11 manual_curation exon 606878 606982 . - . Parent=GSCOCT00019457001 | |
| 53463 chr11 manual_curation exon 608796 608942 . - . Parent=GSCOCT00019457001 | |
| 53464 chr11 manual_curation exon 609051 609114 . - . Parent=GSCOCT00019457001 | |
| 53465 chr11 manual_curation exon 609205 609537 . - . Parent=GSCOCT00019457001 | |
| 53466 chr11 manual_curation exon 609654 609946 . - . Parent=GSCOCT00019457001 | |
| 53467 chr11 manual_curation exon 610041 610220 . - . Parent=GSCOCT00019457001 | |
| 53468 chr11 manual_curation exon 610310 610360 . - . Parent=GSCOCT00019457001 | |
| 53469 chr11 manual_curation exon 611189 611272 . - . Parent=GSCOCT00019457001 | |
| 53470 chr11 manual_curation exon 611362 611475 . - . Parent=GSCOCT00019457001 | |
| 53471 chr11 manual_curation exon 612221 612494 . - . Parent=GSCOCT00019457001 | |
| 53472 chr11 manual_curation exon 613025 613141 . - . Parent=GSCOCT00019457001 | |
| 53473 chr11 manual_curation exon 613269 614031 . - . Parent=GSCOCT00019457001 | |
| 53474 chr11 manual_curation exon 614123 614306 . - . Parent=GSCOCT00019457001 | |
| 53475 chr11 manual_curation exon 614399 614857 . - . Parent=GSCOCT00019457001 | |
| 53476 chr11 manual_curation exon 614951 615022 . - . Parent=GSCOCT00019457001 | |
| 53477 chr11 manual_curation exon 615108 615722 . - . Parent=GSCOCT00019457001 | |
| 53478 chr11 manual_curation exon 617621 617776 . - . Parent=GSCOCT00019457001 | |
| 53479 chr11 manual_curation exon 617868 617996 . - . Parent=GSCOCT00019457001 | |
| 53480 chr11 manual_curation exon 618260 619443 . - . Parent=GSCOCT00019457001 | |
| 53481 chr11 manual_curation exon 619544 619977 . - . Parent=GSCOCT00019457001 | |
| 53482 chr11 manual_curation exon 620479 620924 . - . Parent=GSCOCT00019457001 | |
| 53483 chr11 manual_curation exon 620976 621114 . - . Parent=GSCOCT00019457001 | |
| 53484 chr11 manual_curation exon 622234 622517 . - . Parent=GSCOCT00019457001 | |
| 53485 chr11 manual_curation exon 625424 625540 . - . Parent=GSCOCT00019457001 | |
| 53486 chr11 manual_curation exon 625670 625858 . - . Parent=GSCOCT00019457001 | |
| 53487 chr11 manual_curation exon 628166 628268 . - . Parent=GSCOCT00019457001 | |
| 53488 chr11 manual_curation exon 628439 628497 . - . Parent=GSCOCT00019457001 | |
| 53489 chr11 manual_curation exon 628627 628674 . - . Parent=GSCOCT00019457001 | |
| 53490 chr11 manual_curation CDS 604427 605127 . - 1 Parent=GSCOCT00019457001 | |
| 53491 chr11 manual_curation CDS 605273 605342 . - 0 Parent=GSCOCT00019457001 | |
| 53492 chr11 manual_curation CDS 606514 606618 . - 0 Parent=GSCOCT00019457001 | |
| 53493 chr11 manual_curation CDS 606696 606806 . - 0 Parent=GSCOCT00019457001 | |
| 53494 chr11 manual_curation CDS 606878 606982 . - 0 Parent=GSCOCT00019457001 | |
| 53495 chr11 manual_curation CDS 608796 608942 . - 0 Parent=GSCOCT00019457001 | |
| 53496 chr11 manual_curation CDS 609051 609114 . - 2 Parent=GSCOCT00019457001 | |
| 53497 chr11 manual_curation CDS 609205 609537 . - 2 Parent=GSCOCT00019457001 | |
| 53498 chr11 manual_curation CDS 609654 609946 . - 0 Parent=GSCOCT00019457001 | |
| 53499 chr11 manual_curation CDS 610041 610220 . - 0 Parent=GSCOCT00019457001 | |
| 53500 chr11 manual_curation CDS 610310 610360 . - 0 Parent=GSCOCT00019457001 | |
| 53501 chr11 manual_curation CDS 611189 611272 . - 0 Parent=GSCOCT00019457001 | |
| 53502 chr11 manual_curation CDS 611362 611475 . - 0 Parent=GSCOCT00019457001 | |
| 53503 chr11 manual_curation CDS 612221 612494 . - 2 Parent=GSCOCT00019457001 | |
| 53504 chr11 manual_curation CDS 613025 613141 . - 2 Parent=GSCOCT00019457001 | |
| 53505 chr11 manual_curation CDS 613269 614031 . - 1 Parent=GSCOCT00019457001 | |
| 53506 chr11 manual_curation CDS 614123 614306 . - 0 Parent=GSCOCT00019457001 | |
| 53507 chr11 manual_curation CDS 614399 614857 . - 0 Parent=GSCOCT00019457001 | |
| 53508 chr11 manual_curation CDS 614951 615022 . - 0 Parent=GSCOCT00019457001 | |
| 53509 chr11 manual_curation CDS 615108 615722 . - 0 Parent=GSCOCT00019457001 | |
| 53510 chr11 manual_curation CDS 617621 617776 . - 0 Parent=GSCOCT00019457001 | |
| 53511 chr11 manual_curation CDS 617868 617996 . - 0 Parent=GSCOCT00019457001 | |
| 53512 chr11 manual_curation CDS 618260 619443 . - 1 Parent=GSCOCT00019457001 | |
| 53513 chr11 manual_curation CDS 619544 619977 . - 2 Parent=GSCOCT00019457001 | |
| 53514 chr11 manual_curation CDS 620479 620924 . - 0 Parent=GSCOCT00019457001 | |
| 53515 chr11 manual_curation CDS 620976 621114 . - 2 Parent=GSCOCT00019457001 | |
| 53516 chr11 manual_curation CDS 622234 622517 . - 0 Parent=GSCOCT00019457001 | |
| 53517 chr11 manual_curation CDS 625424 625540 . - 0 Parent=GSCOCT00019457001 | |
| 53518 chr11 manual_curation CDS 625670 625858 . - 0 Parent=GSCOCT00019457001 | |
| 53519 chr11 manual_curation CDS 628166 628268 . - 2 Parent=GSCOCT00019457001 | |
| 53520 chr11 manual_curation CDS 628439 628497 . - 0 Parent=GSCOCT00019457001 | |
| 53521 chr11 manual_curation CDS 628627 628674 . - 0 Parent=GSCOCT00019457001 | |
| 53522 chr11 manual_curation gene 632836 637288 . - . ID=GSCOCG00019458001;Name=Cc11_g00290 | |
| 53523 chr11 manual_curation mRNA 632836 637288 . - . ID=GSCOCT00019458001;Parent=GSCOCG00019458001;Name=Cc11_g00290 | |
| 53524 chr11 manual_curation polypeptide 632836 637288 . - . ID=GSCOCP00019458001;Dbxref=GENE3D:G3DSA:2.40.50.140,InterPro:IPR012340,InterPro:IPR016027,SUPERFAMILY:SSF50249,SwissProt:Q9CWV1,SwissProt:Q9UJA3,TAIR:AT3G09660.1,TAIR:AT5G24740.1,TrEMBL:B9SGR4,TrEMBL:F6HQU8,TrEMBL:Q9SF37;Derives_from=GSCOCT00019458001;Name=Cc11_g00290;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:MCM8,CC_gene:Mcm8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019458001~ Hypothetical protein~ MCM8~ missing_functional_completeness;original_location=complement(join(564241..564375%2C563852..564040%2C563601..563728%2C562986..563133%2C562079..562174%2C561873..561974%2C560843..560983%2C560634..560751%2C560381..560526%2C559923..560177));owner=coffea | |
| 53525 chr11 manual_curation exon 632836 633090 . - . Parent=GSCOCT00019458001 | |
| 53526 chr11 manual_curation exon 633294 633439 . - . Parent=GSCOCT00019458001 | |
| 53527 chr11 manual_curation exon 633547 633664 . - . Parent=GSCOCT00019458001 | |
| 53528 chr11 manual_curation exon 633756 633896 . - . Parent=GSCOCT00019458001 | |
| 53529 chr11 manual_curation exon 634786 634887 . - . Parent=GSCOCT00019458001 | |
| 53530 chr11 manual_curation exon 634992 635087 . - . Parent=GSCOCT00019458001 | |
| 53531 chr11 manual_curation exon 635899 636046 . - . Parent=GSCOCT00019458001 | |
| 53532 chr11 manual_curation exon 636514 636641 . - . Parent=GSCOCT00019458001 | |
| 53533 chr11 manual_curation exon 636765 636953 . - . Parent=GSCOCT00019458001 | |
| 53534 chr11 manual_curation exon 637154 637288 . - . Parent=GSCOCT00019458001 | |
| 53535 chr11 manual_curation CDS 632836 633090 . - 0 Parent=GSCOCT00019458001 | |
| 53536 chr11 manual_curation CDS 633294 633439 . - 1 Parent=GSCOCT00019458001 | |
| 53537 chr11 manual_curation CDS 633547 633664 . - 0 Parent=GSCOCT00019458001 | |
| 53538 chr11 manual_curation CDS 633756 633896 . - 0 Parent=GSCOCT00019458001 | |
| 53539 chr11 manual_curation CDS 634786 634887 . - 0 Parent=GSCOCT00019458001 | |
| 53540 chr11 manual_curation CDS 634992 635087 . - 0 Parent=GSCOCT00019458001 | |
| 53541 chr11 manual_curation CDS 635899 636046 . - 2 Parent=GSCOCT00019458001 | |
| 53542 chr11 manual_curation CDS 636514 636641 . - 0 Parent=GSCOCT00019458001 | |
| 53543 chr11 manual_curation CDS 636765 636953 . - 0 Parent=GSCOCT00019458001 | |
| 53544 chr11 manual_curation CDS 637154 637288 . - 0 Parent=GSCOCT00019458001 | |
| 53545 chr11 manual_curation gene 643346 645074 . - . ID=GSCOCG00019459001;Name=Cc11_g00300 | |
| 53546 chr11 manual_curation mRNA 643346 645074 . - . ID=GSCOCT00019459001;Parent=GSCOCG00019459001;Name=Cc11_g00300 | |
| 53547 chr11 manual_curation polypeptide 643346 645074 . - . ID=GSCOCP00019459001;Dbxref=TAIR:AT5G24740.1,TrEMBL:B8BAF9,TrEMBL:B9FYS0,TrEMBL:Q69UI7;Derives_from=GSCOCT00019459001;Name=Cc11_g00300;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF1162),CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019459001~ Protein of unknown function (DUF1162)~ unknown_gene~ fragment;original_location=complement(join(572132..572161%2C572004..572072%2C571824..571903%2C570433..570586));owner=coffea | |
| 53548 chr11 manual_curation exon 643346 643499 . - . Parent=GSCOCT00019459001 | |
| 53549 chr11 manual_curation exon 644737 644816 . - . Parent=GSCOCT00019459001 | |
| 53550 chr11 manual_curation exon 644917 644985 . - . Parent=GSCOCT00019459001 | |
| 53551 chr11 manual_curation exon 645045 645074 . - . Parent=GSCOCT00019459001 | |
| 53552 chr11 manual_curation CDS 643346 643499 . - 2 Parent=GSCOCT00019459001 | |
| 53553 chr11 manual_curation CDS 644737 644816 . - 0 Parent=GSCOCT00019459001 | |
| 53554 chr11 manual_curation CDS 644917 644985 . - 0 Parent=GSCOCT00019459001 | |
| 53555 chr11 manual_curation CDS 645045 645074 . - 0 Parent=GSCOCT00019459001 | |
| 53556 chr11 manual_curation gene 651832 660785 . - . ID=GSCOCG00019460001;Name=Cc11_g00310 | |
| 53557 chr11 manual_curation mRNA 651832 660785 . - . ID=GSCOCT00019460001;Parent=GSCOCG00019460001;Name=Cc11_g00310 | |
| 53558 chr11 manual_curation polypeptide 651832 660430 . - . ID=GSCOCP00019460001;Dbxref=SwissProt:P87319,SwissProt:Q54KX3,SwissProt:Q555C6,TAIR:AT1G48090.1,TAIR:AT4G17140.3,TAIR:AT5G24740.1,TrEMBL:F4KIH9,TrEMBL:F4KII0,TrEMBL:I1I0I1;Derives_from=GSCOCT00019460001;Name=Cc11_g00310;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative vacuolar protein sorting-associated protein 13B,CC_functional_completeness:fragment,CC_gene:vps13B,CC_gene:vps13a,CC_gene:vps13F;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019460001~ Putative vacuolar protein sorting-associated protein 13B~ vps13B~ fragment;original_location=complement(join(587421..587517%2C587229..587306%2C586949..587061%2C584175..584268%2C580378..580421%2C578919..579038));owner=coffea | |
| 53559 chr11 manual_curation exon 660641 660785 . - . Parent=GSCOCT00019460001 | |
| 53560 chr11 manual_curation exon 651832 651951 . - . Parent=GSCOCT00019460001 | |
| 53561 chr11 manual_curation exon 653291 653334 . - . Parent=GSCOCT00019460001 | |
| 53562 chr11 manual_curation exon 657088 657181 . - . Parent=GSCOCT00019460001 | |
| 53563 chr11 manual_curation exon 659862 659974 . - . Parent=GSCOCT00019460001 | |
| 53564 chr11 manual_curation exon 660142 660219 . - . Parent=GSCOCT00019460001 | |
| 53565 chr11 manual_curation exon 660334 660552 . - . Parent=GSCOCT00019460001 | |
| 53566 chr11 manual_curation CDS 651832 651951 . - 0 Parent=GSCOCT00019460001 | |
| 53567 chr11 manual_curation CDS 653291 653334 . - 1 Parent=GSCOCT00019460001 | |
| 53568 chr11 manual_curation CDS 657088 657181 . - 0 Parent=GSCOCT00019460001 | |
| 53569 chr11 manual_curation CDS 659862 659974 . - 1 Parent=GSCOCT00019460001 | |
| 53570 chr11 manual_curation CDS 660142 660219 . - 1 Parent=GSCOCT00019460001 | |
| 53571 chr11 manual_curation CDS 660334 660430 . - 0 Parent=GSCOCT00019460001 | |
| 53572 chr11 manual_curation gene 677840 689645 . + . ID=GSCOCG00019463001;Name=Cc11_g00320 | |
| 53573 chr11 manual_curation mRNA 677840 689645 . + . ID=GSCOCT00019463001;Parent=GSCOCG00019463001;Name=Cc11_g00320 | |
| 53574 chr11 manual_curation polypeptide 678533 689115 . + . ID=GSCOCP00019463001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019775,InterPro:IPR019781,InterPro:IPR019782,InterPro:IPR020472,PFAM:PF00400,PRINTS:PR00320,PROFILE:PS50082,PROFILE:PS50294,PROSITE:PS00678,SMART:SM00320,SUPERFAMILY:SSF50978,SwissProt:O61585,SwissProt:Q4V7Y7,SwissProt:Q8H0T9,TAIR:AT1G61210.1,TAIR:AT5G08390.1,TAIR:AT5G23430.1,TrEMBL:B9HK05,TrEMBL:B9RJ00,TrEMBL:F6HVX7;Derives_from=GSCOCT00019463001;Name=Cc11_g00320;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.7.11.7,PRODUCT:Katanin p80 WD40 repeat-containing subunit B1 homolog 1,CC_functional_completeness:complete,CC_gene:At5g23430,CC_gene:KATNB1,CC_gene:katnb1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019463001~ Katanin p80 WD40 repeat-containing subunit B1 homolog 1~ At5g23430~ complete;original_location=join(605620..605650%2C605863..605993%2C606435..606552%2C606647..606873%2C607584..607686%2C609451..609521%2C609680..609754%2C609835..609978%2C610121..610349%2C610555..610983%2C611271..611405%2C611459..611505%2C611728..611908%2C612734..612793%2C612869..612990%2C613579..613704%2C614556..614630%2C614728..614840%2C615781..615897%2C615986..616054%2C616139..616202);owner=coffea | |
| 53575 chr11 manual_curation exon 677840 678563 . + . Parent=GSCOCT00019463001 | |
| 53576 chr11 manual_curation exon 678776 678906 . + . Parent=GSCOCT00019463001 | |
| 53577 chr11 manual_curation exon 679348 679465 . + . Parent=GSCOCT00019463001 | |
| 53578 chr11 manual_curation exon 679560 679786 . + . Parent=GSCOCT00019463001 | |
| 53579 chr11 manual_curation exon 680497 680599 . + . Parent=GSCOCT00019463001 | |
| 53580 chr11 manual_curation exon 682364 682434 . + . Parent=GSCOCT00019463001 | |
| 53581 chr11 manual_curation exon 682593 682667 . + . Parent=GSCOCT00019463001 | |
| 53582 chr11 manual_curation exon 682748 682891 . + . Parent=GSCOCT00019463001 | |
| 53583 chr11 manual_curation exon 683034 683262 . + . Parent=GSCOCT00019463001 | |
| 53584 chr11 manual_curation exon 683468 683896 . + . Parent=GSCOCT00019463001 | |
| 53585 chr11 manual_curation exon 684184 684318 . + . Parent=GSCOCT00019463001 | |
| 53586 chr11 manual_curation exon 684372 684418 . + . Parent=GSCOCT00019463001 | |
| 53587 chr11 manual_curation exon 684641 684821 . + . Parent=GSCOCT00019463001 | |
| 53588 chr11 manual_curation exon 685647 685706 . + . Parent=GSCOCT00019463001 | |
| 53589 chr11 manual_curation exon 685782 685903 . + . Parent=GSCOCT00019463001 | |
| 53590 chr11 manual_curation exon 686492 686617 . + . Parent=GSCOCT00019463001 | |
| 53591 chr11 manual_curation exon 687469 687543 . + . Parent=GSCOCT00019463001 | |
| 53592 chr11 manual_curation exon 687641 687753 . + . Parent=GSCOCT00019463001 | |
| 53593 chr11 manual_curation exon 688694 688810 . + . Parent=GSCOCT00019463001 | |
| 53594 chr11 manual_curation exon 688899 688967 . + . Parent=GSCOCT00019463001 | |
| 53595 chr11 manual_curation exon 689052 689645 . + . Parent=GSCOCT00019463001 | |
| 53596 chr11 manual_curation CDS 678533 678563 . + 0 Parent=GSCOCT00019463001 | |
| 53597 chr11 manual_curation CDS 678776 678906 . + 1 Parent=GSCOCT00019463001 | |
| 53598 chr11 manual_curation CDS 679348 679465 . + 0 Parent=GSCOCT00019463001 | |
| 53599 chr11 manual_curation CDS 679560 679786 . + 1 Parent=GSCOCT00019463001 | |
| 53600 chr11 manual_curation CDS 680497 680599 . + 0 Parent=GSCOCT00019463001 | |
| 53601 chr11 manual_curation CDS 682364 682434 . + 1 Parent=GSCOCT00019463001 | |
| 53602 chr11 manual_curation CDS 682593 682667 . + 0 Parent=GSCOCT00019463001 | |
| 53603 chr11 manual_curation CDS 682748 682891 . + 0 Parent=GSCOCT00019463001 | |
| 53604 chr11 manual_curation CDS 683034 683262 . + 0 Parent=GSCOCT00019463001 | |
| 53605 chr11 manual_curation CDS 683468 683896 . + 1 Parent=GSCOCT00019463001 | |
| 53606 chr11 manual_curation CDS 684184 684318 . + 1 Parent=GSCOCT00019463001 | |
| 53607 chr11 manual_curation CDS 684372 684418 . + 1 Parent=GSCOCT00019463001 | |
| 53608 chr11 manual_curation CDS 684641 684821 . + 0 Parent=GSCOCT00019463001 | |
| 53609 chr11 manual_curation CDS 685647 685706 . + 1 Parent=GSCOCT00019463001 | |
| 53610 chr11 manual_curation CDS 685782 685903 . + 1 Parent=GSCOCT00019463001 | |
| 53611 chr11 manual_curation CDS 686492 686617 . + 0 Parent=GSCOCT00019463001 | |
| 53612 chr11 manual_curation CDS 687469 687543 . + 0 Parent=GSCOCT00019463001 | |
| 53613 chr11 manual_curation CDS 687641 687753 . + 0 Parent=GSCOCT00019463001 | |
| 53614 chr11 manual_curation CDS 688694 688810 . + 2 Parent=GSCOCT00019463001 | |
| 53615 chr11 manual_curation CDS 688899 688967 . + 2 Parent=GSCOCT00019463001 | |
| 53616 chr11 manual_curation CDS 689052 689115 . + 2 Parent=GSCOCT00019463001 | |
| 53617 chr11 manual_curation gene 721909 726650 . - . ID=GSCOCG00019466001;Name=Cc11_g00330 | |
| 53618 chr11 manual_curation mRNA 721909 726650 . - . ID=GSCOCT00019466001;Parent=GSCOCG00019466001;Name=Cc11_g00330 | |
| 53619 chr11 manual_curation polypeptide 721909 726650 . - . ID=GSCOCP00019466001;Dbxref=GENE3D:G3DSA:3.20.20.70,InterPro:IPR000111,InterPro:IPR002241,InterPro:IPR013785,InterPro:IPR017853,PFAM:PF02065,PRINTS:PR00740,PROSITE:PS00512,SUPERFAMILY:SSF51445,SwissProt:P14749,SwissProt:Q42656,SwissProt:Q9FXT4,TAIR:AT3G56310.1,TAIR:AT5G08370.1,TAIR:AT5G08380.1,TrEMBL:D7TXW8,TrEMBL:Q8RWB9,TrEMBL:Q9FT97;Derives_from=GSCOCT00019466001;Name=Cc11_g00330;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0008152,CC_EC_number:3.2.1.22,PRODUCT:Alpha-galactosidase,CC_functional_completeness:complete,CC_gene:Os10g0493600;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019466001~ Alpha-galactosidase~ Os10g0493600~ complete;original_location=complement(join(653493..653737%2C652703..652761%2C651490..651546%2C651344..651378%2C651144..651247%2C650954..651029%2C650783..650841%2C650536..650601%2C650287..650370%2C650105..650169%2C649723..649805%2C649503..649593%2C649330..649379%2C648996..649232));owner=coffea | |
| 53620 chr11 manual_curation exon 721909 722145 . - . Parent=GSCOCT00019466001 | |
| 53621 chr11 manual_curation exon 722243 722292 . - . Parent=GSCOCT00019466001 | |
| 53622 chr11 manual_curation exon 722416 722506 . - . Parent=GSCOCT00019466001 | |
| 53623 chr11 manual_curation exon 722636 722718 . - . Parent=GSCOCT00019466001 | |
| 53624 chr11 manual_curation exon 723018 723082 . - . Parent=GSCOCT00019466001 | |
| 53625 chr11 manual_curation exon 723200 723283 . - . Parent=GSCOCT00019466001 | |
| 53626 chr11 manual_curation exon 723449 723514 . - . Parent=GSCOCT00019466001 | |
| 53627 chr11 manual_curation exon 723696 723754 . - . Parent=GSCOCT00019466001 | |
| 53628 chr11 manual_curation exon 723867 723942 . - . Parent=GSCOCT00019466001 | |
| 53629 chr11 manual_curation exon 724057 724160 . - . Parent=GSCOCT00019466001 | |
| 53630 chr11 manual_curation exon 724257 724291 . - . Parent=GSCOCT00019466001 | |
| 53631 chr11 manual_curation exon 724403 724459 . - . Parent=GSCOCT00019466001 | |
| 53632 chr11 manual_curation exon 725616 725674 . - . Parent=GSCOCT00019466001 | |
| 53633 chr11 manual_curation exon 726406 726650 . - . Parent=GSCOCT00019466001 | |
| 53634 chr11 manual_curation CDS 721909 722145 . - 0 Parent=GSCOCT00019466001 | |
| 53635 chr11 manual_curation CDS 722243 722292 . - 1 Parent=GSCOCT00019466001 | |
| 53636 chr11 manual_curation CDS 722416 722506 . - 0 Parent=GSCOCT00019466001 | |
| 53637 chr11 manual_curation CDS 722636 722718 . - 1 Parent=GSCOCT00019466001 | |
| 53638 chr11 manual_curation CDS 723018 723082 . - 2 Parent=GSCOCT00019466001 | |
| 53639 chr11 manual_curation CDS 723200 723283 . - 2 Parent=GSCOCT00019466001 | |
| 53640 chr11 manual_curation CDS 723449 723514 . - 2 Parent=GSCOCT00019466001 | |
| 53641 chr11 manual_curation CDS 723696 723754 . - 0 Parent=GSCOCT00019466001 | |
| 53642 chr11 manual_curation CDS 723867 723942 . - 2 Parent=GSCOCT00019466001 | |
| 53643 chr11 manual_curation CDS 724057 724160 . - 0 Parent=GSCOCT00019466001 | |
| 53644 chr11 manual_curation CDS 724257 724291 . - 1 Parent=GSCOCT00019466001 | |
| 53645 chr11 manual_curation CDS 724403 724459 . - 1 Parent=GSCOCT00019466001 | |
| 53646 chr11 manual_curation CDS 725616 725674 . - 2 Parent=GSCOCT00019466001 | |
| 53647 chr11 manual_curation CDS 726406 726650 . - 0 Parent=GSCOCT00019466001 | |
| 53648 chr11 manual_curation gene 776006 780315 . + . ID=GSCOCG00019469001;Name=Cc11_g00340 | |
| 53649 chr11 manual_curation mRNA 776006 780315 . + . ID=GSCOCT00019469001;Parent=GSCOCG00019469001;Name=Cc11_g00340 | |
| 53650 chr11 manual_curation polypeptide 777475 779720 . + . ID=GSCOCP00019469001;Dbxref=GENE3D:G3DSA:3.40.50.1260,GENE3D:G3DSA:3.40.50.1270,HAMAP:MF_00145,InterPro:IPR001576,InterPro:IPR015824,InterPro:IPR015901,InterPro:IPR015911,PANTHER:PTHR11406,PFAM:PF00162,PRINTS:PR00477,PROSITE:PS00111,SUPERFAMILY:SSF53748,SwissProt:P12783,SwissProt:Q42961,SwissProt:Q42962,TAIR:AT1G56190.1,TAIR:AT1G79550.1,TAIR:AT3G12780.1,TrEMBL:A9P828,TrEMBL:D2D2Z8,TrEMBL:O82158;Derives_from=GSCOCT00019469001;Name=Cc11_g00340;Ontology_term=CC_evidence_code:ISS,GO:0004618,GO:0006096,CC_EC_number:2.7.2.3,PRODUCT:Phosphoglycerate kinase%2C cytosolic,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019469001~ Phosphoglycerate kinase%2C cytosolic~ unknown_gene~ complete;original_location=join(704562..704756%2C705344..705421%2C705519..705779%2C705867..706184%2C706368..706526%2C706613..706807);owner=coffea | |
| 53651 chr11 manual_curation exon 776006 777669 . + . Parent=GSCOCT00019469001 | |
| 53652 chr11 manual_curation exon 778257 778334 . + . Parent=GSCOCT00019469001 | |
| 53653 chr11 manual_curation exon 778432 778692 . + . Parent=GSCOCT00019469001 | |
| 53654 chr11 manual_curation exon 778780 779097 . + . Parent=GSCOCT00019469001 | |
| 53655 chr11 manual_curation exon 779281 779439 . + . Parent=GSCOCT00019469001 | |
| 53656 chr11 manual_curation exon 779526 780315 . + . Parent=GSCOCT00019469001 | |
| 53657 chr11 manual_curation CDS 777475 777669 . + 0 Parent=GSCOCT00019469001 | |
| 53658 chr11 manual_curation CDS 778257 778334 . + 0 Parent=GSCOCT00019469001 | |
| 53659 chr11 manual_curation CDS 778432 778692 . + 0 Parent=GSCOCT00019469001 | |
| 53660 chr11 manual_curation CDS 778780 779097 . + 0 Parent=GSCOCT00019469001 | |
| 53661 chr11 manual_curation CDS 779281 779439 . + 0 Parent=GSCOCT00019469001 | |
| 53662 chr11 manual_curation CDS 779526 779720 . + 0 Parent=GSCOCT00019469001 | |
| 53663 chr11 manual_curation gene 781212 786296 . + . ID=GSCOCG00019470001;Name=Cc11_g00350 | |
| 53664 chr11 manual_curation mRNA 781212 786296 . + . ID=GSCOCT00019470001;Parent=GSCOCG00019470001;Name=Cc11_g00350 | |
| 53665 chr11 manual_curation polypeptide 782459 785679 . + . ID=GSCOCP00019470001;Dbxref=InterPro:IPR000781,PANTHER:PTHR12373,PFAM:PF01133,PRODOM:PD008105,SwissProt:Q86A92,SwissProt:Q93104,SwissProt:Q96319,TAIR:AT5G10810.1,TrEMBL:A9PI27,TrEMBL:B9HB71,TrEMBL:F6H345;Derives_from=GSCOCT00019470001;Name=Cc11_g00350;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Enhancer of rudimentary homolog,CC_functional_completeness:complete,CC_gene:At5g10810,CC_gene:erh;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019470001~ Enhancer of rudimentary homolog~ At5g10810~ complete;original_location=join(709546..709615%2C712040..712160%2C712676..712766);owner=coffea | |
| 53666 chr11 manual_curation exon 781212 781383 . + . Parent=GSCOCT00019470001 | |
| 53667 chr11 manual_curation exon 782432 782528 . + . Parent=GSCOCT00019470001 | |
| 53668 chr11 manual_curation exon 784953 785073 . + . Parent=GSCOCT00019470001 | |
| 53669 chr11 manual_curation exon 785589 786296 . + . Parent=GSCOCT00019470001 | |
| 53670 chr11 manual_curation CDS 782459 782528 . + 0 Parent=GSCOCT00019470001 | |
| 53671 chr11 manual_curation CDS 784953 785073 . + 1 Parent=GSCOCT00019470001 | |
| 53672 chr11 manual_curation CDS 785589 785679 . + 2 Parent=GSCOCT00019470001 | |
| 53673 chr11 manual_curation gene 788765 793239 . - . ID=GSCOCG00019472001;Name=Cc11_g00360 | |
| 53674 chr11 manual_curation mRNA 788765 793239 . - . ID=GSCOCT00019472001;Parent=GSCOCG00019472001;Name=Cc11_g00360 | |
| 53675 chr11 manual_curation polypeptide 789261 792169 . - . ID=GSCOCP00019472001;Dbxref=GENE3D:G3DSA:3.20.20.60,GENE3D:G3DSA:3.40.1380.20,InterPro:IPR001697,InterPro:IPR011037,InterPro:IPR015793,InterPro:IPR015794,InterPro:IPR015795,InterPro:IPR015813,InterPro:IPR018209,PANTHER:PTHR11817,PFAM:PF00224,PFAM:PF02887,PRINTS:PR01050,PROSITE:PS00110,SUPERFAMILY:SSF50800,SUPERFAMILY:SSF51621,SUPERFAMILY:SSF52935,SwissProt:P22200,SwissProt:Q42806,SwissProt:Q42954,TAIR:AT5G08570.1,TAIR:AT5G56350.1,TAIR:AT5G63680.1,TIGRFAMs:TIGR01064,TrEMBL:C5DB51,TrEMBL:C5DB68,TrEMBL:F6HVY1;Derives_from=GSCOCT00019472001;Name=Cc11_g00360;Ontology_term=CC_evidence_code:ISS,GO:0000287,GO:0003824,GO:0004743,GO:0006096,GO:0030955,CC_EC_number:2.7.1.40,PRODUCT:Pyruvate kinase%2C cytosolic isozyme,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019472001~ Pyruvate kinase%2C cytosolic isozyme~ unknown_gene~ complete;original_location=complement(join(718999..719256%2C717397..717858%2C716348..717160));owner=coffea | |
| 53676 chr11 manual_curation exon 788765 790073 . - . Parent=GSCOCT00019472001 | |
| 53677 chr11 manual_curation exon 790310 790771 . - . Parent=GSCOCT00019472001 | |
| 53678 chr11 manual_curation exon 791912 793239 . - . Parent=GSCOCT00019472001 | |
| 53679 chr11 manual_curation CDS 789261 790073 . - 0 Parent=GSCOCT00019472001 | |
| 53680 chr11 manual_curation CDS 790310 790771 . - 0 Parent=GSCOCT00019472001 | |
| 53681 chr11 manual_curation CDS 791912 792169 . - 0 Parent=GSCOCT00019472001 | |
| 53682 chr11 manual_curation gene 801517 805023 . - . ID=GSCOCG00019473001;Name=Cc11_g00370 | |
| 53683 chr11 manual_curation mRNA 801517 805023 . - . ID=GSCOCT00019473001;Parent=GSCOCG00019473001;Name=Cc11_g00370 | |
| 53684 chr11 manual_curation polypeptide 801988 804985 . - . ID=GSCOCP00019473001;Dbxref=InterPro:IPR009287,InterPro:IPR016046,InterPro:IPR022800,PANTHER:PTHR12882,PFAM:PF06093,PIR:PIRSF025023,SwissProt:Q4R941,SwissProt:Q8LCQ3,SwissProt:Q94C60,TAIR:AT5G08565.1,TAIR:AT5G63670.1,TrEMBL:A9PK54,TrEMBL:B9HK06,TrEMBL:B9HUZ8;Derives_from=GSCOCT00019473001;Name=Cc11_g00370;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0008159,GO:0008270,GO:0045941,CC_EC_number:missing_EC_number,PRODUCT:Transcription elongation factor SPT4 homolog 2,CC_functional_completeness:complete,CC_gene:At5g63670,CC_gene:At5g08565,CC_gene:SUPT4H1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019473001~ Transcription elongation factor SPT4 homolog 2~ At5g63670~ complete;original_location=complement(join(731971..732072%2C731759..731850%2C731613..731668%2C730358..730419%2C729075..729125));owner=coffea | |
| 53685 chr11 manual_curation exon 801517 802038 . - . Parent=GSCOCT00019473001 | |
| 53686 chr11 manual_curation exon 803271 803332 . - . Parent=GSCOCT00019473001 | |
| 53687 chr11 manual_curation exon 804526 804581 . - . Parent=GSCOCT00019473001 | |
| 53688 chr11 manual_curation exon 804672 804763 . - . Parent=GSCOCT00019473001 | |
| 53689 chr11 manual_curation exon 804884 805023 . - . Parent=GSCOCT00019473001 | |
| 53690 chr11 manual_curation CDS 801988 802038 . - 0 Parent=GSCOCT00019473001 | |
| 53691 chr11 manual_curation CDS 803271 803332 . - 1 Parent=GSCOCT00019473001 | |
| 53692 chr11 manual_curation CDS 804526 804581 . - 2 Parent=GSCOCT00019473001 | |
| 53693 chr11 manual_curation CDS 804672 804763 . - 0 Parent=GSCOCT00019473001 | |
| 53694 chr11 manual_curation CDS 804884 804985 . - 0 Parent=GSCOCT00019473001 | |
| 53695 chr11 manual_curation gene 806511 811772 . - . ID=GSCOCG00019474001;Name=Cc11_g00380 | |
| 53696 chr11 manual_curation mRNA 806511 811772 . - . ID=GSCOCT00019474001;Parent=GSCOCG00019474001;Name=Cc11_g00380 | |
| 53697 chr11 manual_curation polypeptide 807604 811490 . - . ID=GSCOCP00019474001;Dbxref=GENE3D:G3DSA:3.20.20.70,HAMAP:MF_00206,InterPro:IPR003698,InterPro:IPR006638,InterPro:IPR007197,InterPro:IPR013785,PFAM:PF04055,PIR:PIRSF005963,SMART:SM00729,SwissProt:B9N2B0,SwissProt:B9RX57,SwissProt:Q8LEE8,TAIR:AT2G20860.1,TAIR:AT5G08415.1,TIGRFAMs:TIGR00510,TrEMBL:A9RJ65,TrEMBL:D7TXX5,TrEMBL:I1PX63;Derives_from=GSCOCT00019474001;Name=Cc11_g00380;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,GO:0009107,GO:0016992,GO:0051536,CC_EC_number:missing_EC_number,PRODUCT:Lipoyl synthase%2C chloroplastic,CC_functional_completeness:complete,CC_gene:LIP1P,CC_gene:LIP1P-2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019474001~ Lipoyl synthase%2C chloroplastic~ LIP1P~ complete;original_location=complement(join(738024..738577%2C737209..737299%2C736874..737031%2C735504..735675%2C735087..735197%2C734691..734780));owner=coffea | |
| 53698 chr11 manual_curation exon 806511 807693 . - . Parent=GSCOCT00019474001 | |
| 53699 chr11 manual_curation exon 808000 808110 . - . Parent=GSCOCT00019474001 | |
| 53700 chr11 manual_curation exon 808417 808588 . - . Parent=GSCOCT00019474001 | |
| 53701 chr11 manual_curation exon 809787 809944 . - . Parent=GSCOCT00019474001 | |
| 53702 chr11 manual_curation exon 810122 810212 . - . Parent=GSCOCT00019474001 | |
| 53703 chr11 manual_curation exon 810937 811772 . - . Parent=GSCOCT00019474001 | |
| 53704 chr11 manual_curation CDS 807604 807693 . - 0 Parent=GSCOCT00019474001 | |
| 53705 chr11 manual_curation CDS 808000 808110 . - 0 Parent=GSCOCT00019474001 | |
| 53706 chr11 manual_curation CDS 808417 808588 . - 2 Parent=GSCOCT00019474001 | |
| 53707 chr11 manual_curation CDS 809787 809944 . - 0 Parent=GSCOCT00019474001 | |
| 53708 chr11 manual_curation CDS 810122 810212 . - 2 Parent=GSCOCT00019474001 | |
| 53709 chr11 manual_curation CDS 810937 811490 . - 0 Parent=GSCOCT00019474001 | |
| 53710 chr11 manual_curation gene 827057 833846 . - . ID=GSCOCG00019475001;Name=Cc11_g00390 | |
| 53711 chr11 manual_curation mRNA 827057 833846 . - . ID=GSCOCT00019475001;Parent=GSCOCG00019475001;Name=Cc11_g00390 | |
| 53712 chr11 manual_curation polypeptide 827362 833458 . - . ID=GSCOCP00019475001;Dbxref=TAIR:AT5G08540.1,TrEMBL:D7TXX6,TrEMBL:I1J414,TrEMBL:I1NCV2;Derives_from=GSCOCT00019475001;Name=Cc11_g00390;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019475001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast thylakoid membrane%2C chloroplast%2C chloroplast envelope%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ unknown_gene~ fragment;original_location=complement(join(760228..760545%2C759127..759225%2C757692..757869%2C756372..756469%2C754658..754719%2C754449..754572));owner=coffea | |
| 53713 chr11 manual_curation exon 827057 827485 . - . Parent=GSCOCT00019475001 | |
| 53714 chr11 manual_curation exon 827571 827632 . - . Parent=GSCOCT00019475001 | |
| 53715 chr11 manual_curation exon 829285 829382 . - . Parent=GSCOCT00019475001 | |
| 53716 chr11 manual_curation exon 830605 830782 . - . Parent=GSCOCT00019475001 | |
| 53717 chr11 manual_curation exon 832040 832138 . - . Parent=GSCOCT00019475001 | |
| 53718 chr11 manual_curation exon 833141 833846 . - . Parent=GSCOCT00019475001 | |
| 53719 chr11 manual_curation CDS 827362 827485 . - 2 Parent=GSCOCT00019475001 | |
| 53720 chr11 manual_curation CDS 827571 827632 . - 0 Parent=GSCOCT00019475001 | |
| 53721 chr11 manual_curation CDS 829285 829382 . - 1 Parent=GSCOCT00019475001 | |
| 53722 chr11 manual_curation CDS 830605 830782 . - 0 Parent=GSCOCT00019475001 | |
| 53723 chr11 manual_curation CDS 832040 832138 . - 0 Parent=GSCOCT00019475001 | |
| 53724 chr11 manual_curation CDS 833141 833458 . - 0 Parent=GSCOCT00019475001 | |
| 53725 chr11 manual_curation gene 863891 864763 . - . ID=GSCOCG00019478001;Name=Cc11_g00400 | |
| 53726 chr11 manual_curation mRNA 863891 864763 . - . ID=GSCOCT00019478001;Parent=GSCOCG00019478001;Name=Cc11_g00400 | |
| 53727 chr11 manual_curation polypeptide 863891 864763 . - . ID=GSCOCP00019478001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR013781,InterPro:IPR017853,SUPERFAMILY:SSF51445,SwissProt:P17541,SwissProt:P29024,SwissProt:P36908,TAIR:AT5G24090.1,TrEMBL:A0PD76,TrEMBL:D7REL9,TrEMBL:F2YPN6;Derives_from=GSCOCT00019478001;Name=Cc11_g00400;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0043169,CC_EC_number:3.2.1.17,PRODUCT:Putative Acidic endochitinase,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019478001~ Putative Acidic endochitinase~ unknown_gene~ complete;original_location=complement(790978..791850);owner=coffea | |
| 53728 chr11 manual_curation exon 863891 864763 . - . Parent=GSCOCT00019478001 | |
| 53729 chr11 manual_curation CDS 863891 864763 . - 0 Parent=GSCOCT00019478001 | |
| 53730 chr11 manual_curation gene 927744 928613 . - . ID=GSCOCG00019481001;Name=Cc11_g00410 | |
| 53731 chr11 manual_curation mRNA 927744 928613 . - . ID=GSCOCT00019481001;Parent=GSCOCG00019481001;Name=Cc11_g00410 | |
| 53732 chr11 manual_curation polypeptide 927744 928613 . - . ID=GSCOCP00019481001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR013781,InterPro:IPR017853,SUPERFAMILY:SSF51445,SwissProt:P17541,SwissProt:P29024,SwissProt:P36910,TAIR:AT5G24090.1,TrEMBL:A0PD76,TrEMBL:D7REL9,TrEMBL:F2YPN6;Derives_from=GSCOCT00019481001;Name=Cc11_g00410;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0043169,CC_EC_number:3.2.1.17,PRODUCT:Putative Acidic endochitinase,CC_functional_completeness:complete,CC_gene:SE2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019481001~ Putative Acidic endochitinase~ SE2~ complete;original_location=complement(854831..855700);owner=coffea | |
| 53733 chr11 manual_curation exon 927744 928613 . - . Parent=GSCOCT00019481001 | |
| 53734 chr11 manual_curation CDS 927744 928613 . - 0 Parent=GSCOCT00019481001 | |
| 53735 chr11 manual_curation gene 931770 934407 . + . ID=GSCOCG00019482001;Name=Cc11_g00420 | |
| 53736 chr11 manual_curation mRNA 931770 934407 . + . ID=GSCOCT00019482001;Parent=GSCOCG00019482001;Name=Cc11_g00420 | |
| 53737 chr11 manual_curation polypeptide 931770 934133 . + . ID=GSCOCP00019482001;Dbxref=InterPro:IPR013877,PFAM:PF08568,SwissProt:Q84VX3,TAIR:AT5G11030.2,TrEMBL:B9HAT4,TrEMBL:F6H3V0,TrEMBL:I1MWX4;Derives_from=GSCOCT00019482001;Name=Cc11_g00420;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Aberrant root formation protein 4,CC_functional_completeness:fragment,CC_gene:ALF4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019482001~ Putative Aberrant root formation protein 4~ ALF4~ fragment;original_location=join(858857..859192%2C859273..859344%2C859899..859976%2C860210..860410%2C860709..860760%2C861084..861220);owner=coffea | |
| 53738 chr11 manual_curation exon 931770 932105 . + . Parent=GSCOCT00019482001 | |
| 53739 chr11 manual_curation exon 932186 932257 . + . Parent=GSCOCT00019482001 | |
| 53740 chr11 manual_curation exon 932812 932889 . + . Parent=GSCOCT00019482001 | |
| 53741 chr11 manual_curation exon 933123 933323 . + . Parent=GSCOCT00019482001 | |
| 53742 chr11 manual_curation exon 933622 933673 . + . Parent=GSCOCT00019482001 | |
| 53743 chr11 manual_curation exon 933997 934407 . + . Parent=GSCOCT00019482001 | |
| 53744 chr11 manual_curation CDS 931770 932105 . + 0 Parent=GSCOCT00019482001 | |
| 53745 chr11 manual_curation CDS 932186 932257 . + 0 Parent=GSCOCT00019482001 | |
| 53746 chr11 manual_curation CDS 932812 932889 . + 0 Parent=GSCOCT00019482001 | |
| 53747 chr11 manual_curation CDS 933123 933323 . + 0 Parent=GSCOCT00019482001 | |
| 53748 chr11 manual_curation CDS 933622 933673 . + 0 Parent=GSCOCT00019482001 | |
| 53749 chr11 manual_curation CDS 933997 934133 . + 1 Parent=GSCOCT00019482001 | |
| 53750 chr11 manual_curation gene 954480 955160 . - . ID=GSCOCG00019483001;Name=Cc11_g00430 | |
| 53751 chr11 manual_curation mRNA 954480 955160 . - . ID=GSCOCT00019483001;Parent=GSCOCG00019483001;Name=Cc11_g00430 | |
| 53752 chr11 manual_curation polypeptide 954480 955160 . - . ID=GSCOCP00019483001;Dbxref=InterPro:IPR012337,InterPro:IPR015706,PANTHER:PTHR19446,SUPERFAMILY:SSF53098,TAIR:AT2G04420.1,TAIR:AT3G25270.1,TAIR:AT4G29090.1,TrEMBL:B8AE80,TrEMBL:G7IVN4,TrEMBL:I1GQT2;Derives_from=GSCOCT00019483001;Name=Cc11_g00430;Ontology_term=CC_evidence_code:ISS,GO:0003676,CC_EC_number:missing_EC_number,PRODUCT:Putative Ribonuclease H-like superfamily protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019483001~ Putative Ribonuclease H-like superfamily protein~ unknown_gene~ fragment;original_location=complement(881567..882247);owner=coffea | |
| 53753 chr11 manual_curation exon 954480 955160 . - . Parent=GSCOCT00019483001 | |
| 53754 chr11 manual_curation CDS 954480 955160 . - 0 Parent=GSCOCT00019483001 | |
| 53755 chr11 manual_curation gene 964532 967130 . - . ID=GSCOCG00019484001;Name=Cc11_g00440 | |
| 53756 chr11 manual_curation mRNA 964532 967130 . - . ID=GSCOCT00019484001;Parent=GSCOCG00019484001;Name=Cc11_g00440 | |
| 53757 chr11 manual_curation polypeptide 964532 967130 . - . ID=GSCOCP00019484001;Dbxref=TAIR:AT5G19050.1,TrEMBL:B7EB72,TrEMBL:B9FW57,TrEMBL:Q7F1B1;Derives_from=GSCOCT00019484001;Name=Cc11_g00440;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019484001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(894170..894217%2C894007..894072%2C891619..891765));owner=coffea | |
| 53758 chr11 manual_curation exon 964532 964678 . - . Parent=GSCOCT00019484001 | |
| 53759 chr11 manual_curation exon 966920 966985 . - . Parent=GSCOCT00019484001 | |
| 53760 chr11 manual_curation exon 967083 967130 . - . Parent=GSCOCT00019484001 | |
| 53761 chr11 manual_curation CDS 964532 964678 . - 0 Parent=GSCOCT00019484001 | |
| 53762 chr11 manual_curation CDS 966920 966985 . - 0 Parent=GSCOCT00019484001 | |
| 53763 chr11 manual_curation CDS 967083 967130 . - 0 Parent=GSCOCT00019484001 | |
| 53764 chr11 manual_curation gene 972557 975046 . + . ID=GSCOCG00019485001;Name=Cc11_g00450 | |
| 53765 chr11 manual_curation mRNA 972557 975046 . + . ID=GSCOCT00019485001;Parent=GSCOCG00019485001;Name=Cc11_g00450 | |
| 53766 chr11 manual_curation polypeptide 972557 975046 . + . ID=GSCOCP00019485001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SMART:SM00369,SwissProt:C0LGS2,SwissProt:O82318,SwissProt:Q9FL28,TAIR:AT2G25790.1,TAIR:AT2G34930.1,TAIR:AT3G56370.1,TrEMBL:B8AB81,TrEMBL:I1MN69,TrEMBL:I1MPB1;Derives_from=GSCOCT00019485001;Name=Cc11_g00450;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:3.1.3.16,PRODUCT:Putative Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790,CC_functional_completeness:complete,CC_gene:At2g25790,CC_gene:At4g36180,CC_gene:FLS2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019485001~ Putative Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790~ At2g25790~ complete;original_location=join(899644..899939%2C899997..900192%2C900397..900741%2C901105..901436%2C901511..901665%2C901751..902133);owner=coffea | |
| 53767 chr11 manual_curation exon 972557 972852 . + . Parent=GSCOCT00019485001 | |
| 53768 chr11 manual_curation exon 972910 973105 . + . Parent=GSCOCT00019485001 | |
| 53769 chr11 manual_curation exon 973310 973654 . + . Parent=GSCOCT00019485001 | |
| 53770 chr11 manual_curation exon 974018 974349 . + . Parent=GSCOCT00019485001 | |
| 53771 chr11 manual_curation exon 974424 974578 . + . Parent=GSCOCT00019485001 | |
| 53772 chr11 manual_curation exon 974664 975046 . + . Parent=GSCOCT00019485001 | |
| 53773 chr11 manual_curation CDS 972557 972852 . + 0 Parent=GSCOCT00019485001 | |
| 53774 chr11 manual_curation CDS 972910 973105 . + 2 Parent=GSCOCT00019485001 | |
| 53775 chr11 manual_curation CDS 973310 973654 . + 0 Parent=GSCOCT00019485001 | |
| 53776 chr11 manual_curation CDS 974018 974349 . + 0 Parent=GSCOCT00019485001 | |
| 53777 chr11 manual_curation CDS 974424 974578 . + 2 Parent=GSCOCT00019485001 | |
| 53778 chr11 manual_curation CDS 974664 975046 . + 1 Parent=GSCOCT00019485001 | |
| 53779 chr11 manual_curation gene 990307 991572 . + . ID=GSCOCG00019488001;Name=Cc11_g00460 | |
| 53780 chr11 manual_curation mRNA 990307 991572 . + . ID=GSCOCT00019488001;Parent=GSCOCG00019488001;Name=Cc11_g00460 | |
| 53781 chr11 manual_curation polypeptide 991182 991448 . + . ID=GSCOCP00019488001;Derives_from=GSCOCT00019488001;Name=Cc11_g00460;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019488001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=918269..918535;owner=coffea | |
| 53782 chr11 manual_curation exon 990307 991572 . + . Parent=GSCOCT00019488001 | |
| 53783 chr11 manual_curation CDS 991182 991448 . + 0 Parent=GSCOCT00019488001 | |
| 53784 chr11 manual_curation gene 1077824 1078849 . + . ID=GSCOCG00019490001;Name=Cc11_g00470 | |
| 53785 chr11 manual_curation mRNA 1077824 1078849 . + . ID=GSCOCT00019490001;Parent=GSCOCG00019490001;Name=Cc11_g00470 | |
| 53786 chr11 manual_curation polypeptide 1077824 1078849 . + . ID=GSCOCP00019490001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,PFAM:PF00560,SMART:SM00369,SwissProt:C0LGV1,SwissProt:Q9LHP4,SwissProt:Q9LYN8,TAIR:AT2G34930.1,TAIR:AT5G07280.1,TAIR:AT5G56040.2,TrEMBL:B9GFB5,TrEMBL:B9HW18,TrEMBL:B9RXB4;Derives_from=GSCOCT00019490001;Name=Cc11_g00470;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative Leucine-rich repeat receptor protein kinase EXS,CC_functional_completeness:complete,CC_gene:EXS,CC_gene:RCH1,CC_gene:RCH2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019490001~ Putative Leucine-rich repeat receptor protein kinase EXS~ EXS~ complete;original_location=join(1004911..1005149%2C1005222..1005936);owner=coffea | |
| 53787 chr11 manual_curation exon 1077824 1078062 . + . Parent=GSCOCT00019490001 | |
| 53788 chr11 manual_curation exon 1078135 1078849 . + . Parent=GSCOCT00019490001 | |
| 53789 chr11 manual_curation CDS 1077824 1078062 . + 0 Parent=GSCOCT00019490001 | |
| 53790 chr11 manual_curation CDS 1078135 1078849 . + 2 Parent=GSCOCT00019490001 | |
| 53791 chr11 manual_curation gene 1100883 1104153 . + . ID=GSCOCG00007397001;Name=Cc11_g00480 | |
| 53792 chr11 manual_curation mRNA 1100883 1104153 . + . ID=GSCOCT00007397001;Parent=GSCOCG00007397001;Name=Cc11_g00480 | |
| 53793 chr11 manual_curation polypeptide 1100883 1103363 . + . ID=GSCOCP00007397001;Dbxref=InterPro:IPR001993,InterPro:IPR002067,InterPro:IPR002113,InterPro:IPR018108,PANTHER:PTHR11896,PFAM:PF00153,PRINTS:PR00926,PRINTS:PR00927,PROFILE:PS50920,SUPERFAMILY:SSF103506,SwissProt:P33303,SwissProt:Q99297,SwissProt:Q9P3T7,TAIR:AT1G14140.1,TAIR:AT3G54110.1,TAIR:AT5G01340.1,TrEMBL:A5C415,TrEMBL:B9IGC3,TrEMBL:I1JGX6;Derives_from=GSCOCT00007397001;Name=Cc11_g00480;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0005488,GO:0005743,GO:0006810,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Putative Succinate/fumarate mitochondrial transporter,CC_functional_completeness:complete,CC_gene:SFC1,CC_gene:SPAC328.09,CC_gene:ODC2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00007397001~ Putative Succinate/fumarate mitochondrial transporter~ SFC1~ complete;original_location=join(21828..22223%2C23772..24308);owner=coffea | |
| 53794 chr11 manual_curation exon 1100883 1101278 . + . Parent=GSCOCT00007397001 | |
| 53795 chr11 manual_curation exon 1102827 1104153 . + . Parent=GSCOCT00007397001 | |
| 53796 chr11 manual_curation CDS 1100883 1101278 . + 0 Parent=GSCOCT00007397001 | |
| 53797 chr11 manual_curation CDS 1102827 1103363 . + 0 Parent=GSCOCT00007397001 | |
| 53798 chr11 manual_curation gene 1176038 1183807 . + . ID=GSCOCG00007401001;Name=Cc11_g00490 | |
| 53799 chr11 manual_curation mRNA 1176038 1183807 . + . ID=GSCOCT00007401001;Parent=GSCOCG00007401001;Name=Cc11_g00490 | |
| 53800 chr11 manual_curation polypeptide 1177267 1183329 . + . ID=GSCOCP00007401001;Dbxref=InterPro:IPR001005,InterPro:IPR006447,InterPro:IPR009057,InterPro:IPR014778,InterPro:IPR015609,InterPro:IPR017884,InterPro:IPR017930,PANTHER:PTHR11821,PFAM:PF00249,PROFILE:PS51293,PROFILE:PS51294,SMART:SM00717,SUPERFAMILY:SSF46689,SwissProt:Q2V9B0,SwissProt:Q869R9,TAIR:AT1G49010.1,TAIR:AT5G08520.1,TAIR:AT5G23650.1,TIGRFAMs:TIGR01557,TrEMBL:B9RGH4,TrEMBL:I1KKZ7,TrEMBL:I1ND50;Derives_from=GSCOCT00007401001;Name=Cc11_g00490;Ontology_term=CC_evidence_code:ISS,GO:0003677,CC_EC_number:missing_EC_number,PRODUCT:Duplicated homeodomain-like superfamily protein,CC_functional_completeness:complete,CC_gene:mybJ;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00007401001~ Duplicated homeodomain-like superfamily protein~ mybJ~ complete;original_location=join(98212..98594%2C103770..104274);owner=coffea | |
| 53801 chr11 manual_curation exon 1176038 1177649 . + . Parent=GSCOCT00007401001 | |
| 53802 chr11 manual_curation exon 1182825 1183807 . + . Parent=GSCOCT00007401001 | |
| 53803 chr11 manual_curation CDS 1177267 1177649 . + 0 Parent=GSCOCT00007401001 | |
| 53804 chr11 manual_curation CDS 1182825 1183329 . + 2 Parent=GSCOCT00007401001 | |
| 53805 chr11 manual_curation gene 1189497 1192227 . - . ID=GSCOCG00007402001;Name=Cc11_g00500 | |
| 53806 chr11 manual_curation mRNA 1189497 1192227 . - . ID=GSCOCT00007402001;Parent=GSCOCG00007402001;Name=Cc11_g00500 | |
| 53807 chr11 manual_curation polypeptide 1189815 1190352 . - . ID=GSCOCP00007402001;Dbxref=InterPro:IPR007218,PFAM:PF04081,TAIR:AT1G09815.1,TrEMBL:B9IPX7,TrEMBL:Q1H568,TrEMBL:Q8L9H3;Derives_from=GSCOCT00007402001;Name=Cc11_g00500;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0006260,CC_EC_number:missing_EC_number,PRODUCT:polymerase delta 4,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00007402001~ polymerase delta 4~ unknown_gene~ complete;original_location=complement(join(111111..111297%2C110760..110953));owner=coffea | |
| 53808 chr11 manual_curation exon 1191501 1191603 . - . Parent=GSCOCT00007402001 | |
| 53809 chr11 manual_curation exon 1192078 1192227 . - . Parent=GSCOCT00007402001 | |
| 53810 chr11 manual_curation exon 1189497 1190008 . - . Parent=GSCOCT00007402001 | |
| 53811 chr11 manual_curation exon 1190166 1190435 . - . Parent=GSCOCT00007402001 | |
| 53812 chr11 manual_curation CDS 1189815 1190008 . - 1 Parent=GSCOCT00007402001 | |
| 53813 chr11 manual_curation CDS 1190166 1190352 . - 0 Parent=GSCOCT00007402001 | |
| 53814 chr11 manual_curation gene 1346658 1361490 . - . ID=GSCOCG00007403001;Name=Cc11_g00510 | |
| 53815 chr11 manual_curation mRNA 1346658 1361490 . - . ID=GSCOCT00007403001;Parent=GSCOCG00007403001;Name=Cc11_g00510 | |
| 53816 chr11 manual_curation polypeptide 1347038 1361131 . - . ID=GSCOCP00007403001;Dbxref=GENE3D:G3DSA:3.30.470.20,GENE3D:G3DSA:3.40.50.20,InterPro:IPR004549,InterPro:IPR005479,InterPro:IPR005481,InterPro:IPR005482,InterPro:IPR011054,InterPro:IPR011761,InterPro:IPR011764,InterPro:IPR013816,InterPro:IPR013817,InterPro:IPR016185,PFAM:PF00289,PFAM:PF02785,PFAM:PF02786,PROFILE:PS50975,PROFILE:PS50979,PROSITE:PS00866,PROSITE:PS00867,SMART:SM00878,SUPERFAMILY:SSF51246,SUPERFAMILY:SSF52440,SwissProt:B9HBA8,SwissProt:B9N843,SwissProt:O04983,TAIR:AT1G03090.2,TAIR:AT1G36180.1,TAIR:AT5G35360.3,TIGRFAMs:TIGR00514,TrEMBL:B5LAS7,TrEMBL:H9CCH6,TrEMBL:Q40475;Derives_from=GSCOCT00007403001;Name=Cc11_g00510;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005524,GO:0008152,GO:0009374,GO:0016874,CC_EC_number:6.3.4.14,PRODUCT:Biotin carboxylase 1%2C chloroplastic,CC_functional_completeness:complete,CC_gene:POPTRDRAFT_831870,CC_gene:POPTRDRAFT_673504,CC_gene:CAC2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00007403001~ Biotin carboxylase 1%2C chloroplastic~ POPTRDRAFT_831870~ complete;original_location=complement(join(282014..282076%2C281165..281490%2C277022..277163%2C275828..275926%2C275652..275708%2C274738..274809%2C273840..273929%2C271912..271971%2C270949..271134%2C270763..270861%2C270609..270690%2C270027..270133%2C269136..269211%2C268669..268715%2C268506..268568%2C267983..268039));owner=coffea | |
| 53817 chr11 manual_curation exon 1361314 1361490 . - . Parent=GSCOCT00007403001 | |
| 53818 chr11 manual_curation exon 1346658 1347094 . - . Parent=GSCOCT00007403001 | |
| 53819 chr11 manual_curation exon 1347561 1347623 . - . Parent=GSCOCT00007403001 | |
| 53820 chr11 manual_curation exon 1347724 1347770 . - . Parent=GSCOCT00007403001 | |
| 53821 chr11 manual_curation exon 1348191 1348266 . - . Parent=GSCOCT00007403001 | |
| 53822 chr11 manual_curation exon 1349082 1349188 . - . Parent=GSCOCT00007403001 | |
| 53823 chr11 manual_curation exon 1349664 1349745 . - . Parent=GSCOCT00007403001 | |
| 53824 chr11 manual_curation exon 1349818 1349916 . - . Parent=GSCOCT00007403001 | |
| 53825 chr11 manual_curation exon 1350004 1350189 . - . Parent=GSCOCT00007403001 | |
| 53826 chr11 manual_curation exon 1350967 1351026 . - . Parent=GSCOCT00007403001 | |
| 53827 chr11 manual_curation exon 1352895 1352984 . - . Parent=GSCOCT00007403001 | |
| 53828 chr11 manual_curation exon 1353793 1353864 . - . Parent=GSCOCT00007403001 | |
| 53829 chr11 manual_curation exon 1354707 1354763 . - . Parent=GSCOCT00007403001 | |
| 53830 chr11 manual_curation exon 1354883 1354981 . - . Parent=GSCOCT00007403001 | |
| 53831 chr11 manual_curation exon 1356077 1356218 . - . Parent=GSCOCT00007403001 | |
| 53832 chr11 manual_curation exon 1360220 1360545 . - . Parent=GSCOCT00007403001 | |
| 53833 chr11 manual_curation exon 1361069 1361172 . - . Parent=GSCOCT00007403001 | |
| 53834 chr11 manual_curation CDS 1347038 1347094 . - 0 Parent=GSCOCT00007403001 | |
| 53835 chr11 manual_curation CDS 1347561 1347623 . - 0 Parent=GSCOCT00007403001 | |
| 53836 chr11 manual_curation CDS 1347724 1347770 . - 1 Parent=GSCOCT00007403001 | |
| 53837 chr11 manual_curation CDS 1348191 1348266 . - 0 Parent=GSCOCT00007403001 | |
| 53838 chr11 manual_curation CDS 1349082 1349188 . - 1 Parent=GSCOCT00007403001 | |
| 53839 chr11 manual_curation CDS 1349664 1349745 . - 0 Parent=GSCOCT00007403001 | |
| 53840 chr11 manual_curation CDS 1349818 1349916 . - 0 Parent=GSCOCT00007403001 | |
| 53841 chr11 manual_curation CDS 1350004 1350189 . - 0 Parent=GSCOCT00007403001 | |
| 53842 chr11 manual_curation CDS 1350967 1351026 . - 0 Parent=GSCOCT00007403001 | |
| 53843 chr11 manual_curation CDS 1352895 1352984 . - 0 Parent=GSCOCT00007403001 | |
| 53844 chr11 manual_curation CDS 1353793 1353864 . - 0 Parent=GSCOCT00007403001 | |
| 53845 chr11 manual_curation CDS 1354707 1354763 . - 0 Parent=GSCOCT00007403001 | |
| 53846 chr11 manual_curation CDS 1354883 1354981 . - 0 Parent=GSCOCT00007403001 | |
| 53847 chr11 manual_curation CDS 1356077 1356218 . - 2 Parent=GSCOCT00007403001 | |
| 53848 chr11 manual_curation CDS 1360220 1360545 . - 0 Parent=GSCOCT00007403001 | |
| 53849 chr11 manual_curation CDS 1361069 1361131 . - 0 Parent=GSCOCT00007403001 | |
| 53850 chr11 manual_curation gene 1402998 1406024 . + . ID=GSCOCG00007404001;Name=Cc11_g00520 | |
| 53851 chr11 manual_curation mRNA 1402998 1406024 . + . ID=GSCOCT00007404001;Parent=GSCOCG00007404001;Name=Cc11_g00520 | |
| 53852 chr11 manual_curation polypeptide 1402998 1406024 . + . ID=GSCOCP00007404001;Dbxref=GENE3D:G3DSA:2.160.20.10,InterPro:IPR000743,InterPro:IPR006626,InterPro:IPR011050,InterPro:IPR012334,PFAM:PF00295,PROSITE:PS00502,SMART:SM00710,SUPERFAMILY:SSF51126,SwissProt:Q39766,SwissProt:Q39786,SwissProt:Q6H9K0,TAIR:AT1G17150.1,TAIR:AT1G78400.1,TAIR:AT2G33160.1,TrEMBL:D7LFQ2,TrEMBL:D7T9Y0,TrEMBL:O49319;Derives_from=GSCOCT00007404001;Name=Cc11_g00520;Ontology_term=CC_evidence_code:ISS,GO:0004650,GO:0005975,CC_EC_number:3.2.1.67,PRODUCT:Putative Exopolygalacturonase (Fragment),CC_functional_completeness:complete,CC_gene:plaa2,CC_gene:G9;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00007404001~ Putative Exopolygalacturonase (Fragment)~ plaa2~ complete;original_location=join(323943..324086%2C324589..324897%2C325633..326142%2C326733..326969);owner=coffea | |
| 53853 chr11 manual_curation exon 1402998 1403141 . + . Parent=GSCOCT00007404001 | |
| 53854 chr11 manual_curation exon 1403644 1403952 . + . Parent=GSCOCT00007404001 | |
| 53855 chr11 manual_curation exon 1404688 1405197 . + . Parent=GSCOCT00007404001 | |
| 53856 chr11 manual_curation exon 1405788 1406024 . + . Parent=GSCOCT00007404001 | |
| 53857 chr11 manual_curation CDS 1402998 1403141 . + 0 Parent=GSCOCT00007404001 | |
| 53858 chr11 manual_curation CDS 1403644 1403952 . + 0 Parent=GSCOCT00007404001 | |
| 53859 chr11 manual_curation CDS 1404688 1405197 . + 0 Parent=GSCOCT00007404001 | |
| 53860 chr11 manual_curation CDS 1405788 1406024 . + 0 Parent=GSCOCT00007404001 | |
| 53861 chr11 manual_curation gene 1449721 1451208 . - . ID=GSCOCG00007406001;Name=Cc11_g00530 | |
| 53862 chr11 manual_curation mRNA 1449721 1451208 . - . ID=GSCOCT00007406001;Parent=GSCOCG00007406001;Name=Cc11_g00530 | |
| 53863 chr11 manual_curation polypeptide 1449790 1451208 . - . ID=GSCOCP00007406001;Derives_from=GSCOCT00007406001;Name=Cc11_g00530;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00007406001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(372127..372153%2C371399..371735%2C370735..371057));owner=coffea | |
| 53864 chr11 manual_curation exon 1449721 1450112 . - . Parent=GSCOCT00007406001 | |
| 53865 chr11 manual_curation exon 1450454 1450790 . - . Parent=GSCOCT00007406001 | |
| 53866 chr11 manual_curation exon 1451182 1451208 . - . Parent=GSCOCT00007406001 | |
| 53867 chr11 manual_curation CDS 1449790 1450112 . - 1 Parent=GSCOCT00007406001 | |
| 53868 chr11 manual_curation CDS 1450454 1450790 . - 0 Parent=GSCOCT00007406001 | |
| 53869 chr11 manual_curation CDS 1451182 1451208 . - 0 Parent=GSCOCT00007406001 | |
| 53870 chr11 manual_curation gene 1465962 1479812 . - . ID=GSCOCG00007407001;Name=Cc11_g00540 | |
| 53871 chr11 manual_curation mRNA 1465962 1479812 . - . ID=GSCOCT00007407001;Parent=GSCOCG00007407001;Name=Cc11_g00540 | |
| 53872 chr11 manual_curation polypeptide 1465962 1479812 . - . ID=GSCOCP00007407001;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR013525,PFAM:PF00005,PFAM:PF01061,PROFILE:PS50893,SMART:SM00382,SwissProt:Q5W274,SwissProt:Q9LFH0,SwissProt:Q9ZUT8,TAIR:AT2G37280.1,TAIR:AT3G53480.1,TAIR:AT4G15215.1,TrEMBL:B9GSZ4,TrEMBL:B9RFG3,TrEMBL:I1JP89;Derives_from=GSCOCT00007407001;Name=Cc11_g00540;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0016020,GO:0016887,GO:0017111,CC_EC_number:3.6.3.28,CC_EC_number:3.6.3.28,PRODUCT:Pleiotropic drug resistance protein 3,CC_functional_completeness:complete,CC_gene:PDR3,CC_gene:ABCG33,CC_gene:ABCG37;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00007407001~ Pleiotropic drug resistance protein 3~ PDR3~ complete;original_location=complement(join(400267..400757%2C400048..400209%2C398275..398398%2C395860..395945%2C395287..395371%2C394891..395050%2C394697..394773%2C394365..394418%2C394142..394232%2C393745..394046%2C393419..393591%2C393306..393362%2C393111..393152%2C392444..392638%2C391802..391916%2C391663..391730%2C391325..391470%2C391162..391232%2C390887..391063%2C390731..390829%2C390298..390588%2C389634..389717%2C388996..389129%2C388748..388777%2C388553..388600%2C388280..388396%2C387754..388033%2C386907..387173));owner=coffea | |
| 53873 chr11 manual_curation exon 1465962 1466228 . - . Parent=GSCOCT00007407001 | |
| 53874 chr11 manual_curation exon 1466809 1467088 . - . Parent=GSCOCT00007407001 | |
| 53875 chr11 manual_curation exon 1467335 1467451 . - . Parent=GSCOCT00007407001 | |
| 53876 chr11 manual_curation exon 1467608 1467655 . - . Parent=GSCOCT00007407001 | |
| 53877 chr11 manual_curation exon 1467803 1467832 . - . Parent=GSCOCT00007407001 | |
| 53878 chr11 manual_curation exon 1468051 1468184 . - . Parent=GSCOCT00007407001 | |
| 53879 chr11 manual_curation exon 1468689 1468772 . - . Parent=GSCOCT00007407001 | |
| 53880 chr11 manual_curation exon 1469353 1469643 . - . Parent=GSCOCT00007407001 | |
| 53881 chr11 manual_curation exon 1469786 1469884 . - . Parent=GSCOCT00007407001 | |
| 53882 chr11 manual_curation exon 1469942 1470118 . - . Parent=GSCOCT00007407001 | |
| 53883 chr11 manual_curation exon 1470217 1470287 . - . Parent=GSCOCT00007407001 | |
| 53884 chr11 manual_curation exon 1470380 1470525 . - . Parent=GSCOCT00007407001 | |
| 53885 chr11 manual_curation exon 1470718 1470785 . - . Parent=GSCOCT00007407001 | |
| 53886 chr11 manual_curation exon 1470857 1470971 . - . Parent=GSCOCT00007407001 | |
| 53887 chr11 manual_curation exon 1471499 1471693 . - . Parent=GSCOCT00007407001 | |
| 53888 chr11 manual_curation exon 1472166 1472207 . - . Parent=GSCOCT00007407001 | |
| 53889 chr11 manual_curation exon 1472361 1472417 . - . Parent=GSCOCT00007407001 | |
| 53890 chr11 manual_curation exon 1472474 1472646 . - . Parent=GSCOCT00007407001 | |
| 53891 chr11 manual_curation exon 1472800 1473101 . - . Parent=GSCOCT00007407001 | |
| 53892 chr11 manual_curation exon 1473197 1473287 . - . Parent=GSCOCT00007407001 | |
| 53893 chr11 manual_curation exon 1473420 1473473 . - . Parent=GSCOCT00007407001 | |
| 53894 chr11 manual_curation exon 1473752 1473828 . - . Parent=GSCOCT00007407001 | |
| 53895 chr11 manual_curation exon 1473946 1474105 . - . Parent=GSCOCT00007407001 | |
| 53896 chr11 manual_curation exon 1474342 1474426 . - . Parent=GSCOCT00007407001 | |
| 53897 chr11 manual_curation exon 1474915 1475000 . - . Parent=GSCOCT00007407001 | |
| 53898 chr11 manual_curation exon 1477330 1477453 . - . Parent=GSCOCT00007407001 | |
| 53899 chr11 manual_curation exon 1479103 1479264 . - . Parent=GSCOCT00007407001 | |
| 53900 chr11 manual_curation exon 1479322 1479812 . - . Parent=GSCOCT00007407001 | |
| 53901 chr11 manual_curation CDS 1465962 1466228 . - 0 Parent=GSCOCT00007407001 | |
| 53902 chr11 manual_curation CDS 1466809 1467088 . - 2 Parent=GSCOCT00007407001 | |
| 53903 chr11 manual_curation CDS 1467335 1467451 . - 2 Parent=GSCOCT00007407001 | |
| 53904 chr11 manual_curation CDS 1467608 1467655 . - 2 Parent=GSCOCT00007407001 | |
| 53905 chr11 manual_curation CDS 1467803 1467832 . - 2 Parent=GSCOCT00007407001 | |
| 53906 chr11 manual_curation CDS 1468051 1468184 . - 0 Parent=GSCOCT00007407001 | |
| 53907 chr11 manual_curation CDS 1468689 1468772 . - 0 Parent=GSCOCT00007407001 | |
| 53908 chr11 manual_curation CDS 1469353 1469643 . - 0 Parent=GSCOCT00007407001 | |
| 53909 chr11 manual_curation CDS 1469786 1469884 . - 0 Parent=GSCOCT00007407001 | |
| 53910 chr11 manual_curation CDS 1469942 1470118 . - 0 Parent=GSCOCT00007407001 | |
| 53911 chr11 manual_curation CDS 1470217 1470287 . - 1 Parent=GSCOCT00007407001 | |
| 53912 chr11 manual_curation CDS 1470380 1470525 . - 2 Parent=GSCOCT00007407001 | |
| 53913 chr11 manual_curation CDS 1470718 1470785 . - 0 Parent=GSCOCT00007407001 | |
| 53914 chr11 manual_curation CDS 1470857 1470971 . - 2 Parent=GSCOCT00007407001 | |
| 53915 chr11 manual_curation CDS 1471499 1471693 . - 2 Parent=GSCOCT00007407001 | |
| 53916 chr11 manual_curation CDS 1472166 1472207 . - 2 Parent=GSCOCT00007407001 | |
| 53917 chr11 manual_curation CDS 1472361 1472417 . - 2 Parent=GSCOCT00007407001 | |
| 53918 chr11 manual_curation CDS 1472474 1472646 . - 0 Parent=GSCOCT00007407001 | |
| 53919 chr11 manual_curation CDS 1472800 1473101 . - 1 Parent=GSCOCT00007407001 | |
| 53920 chr11 manual_curation CDS 1473197 1473287 . - 0 Parent=GSCOCT00007407001 | |
| 53921 chr11 manual_curation CDS 1473420 1473473 . - 0 Parent=GSCOCT00007407001 | |
| 53922 chr11 manual_curation CDS 1473752 1473828 . - 1 Parent=GSCOCT00007407001 | |
| 53923 chr11 manual_curation CDS 1473946 1474105 . - 0 Parent=GSCOCT00007407001 | |
| 53924 chr11 manual_curation CDS 1474342 1474426 . - 2 Parent=GSCOCT00007407001 | |
| 53925 chr11 manual_curation CDS 1474915 1475000 . - 0 Parent=GSCOCT00007407001 | |
| 53926 chr11 manual_curation CDS 1477330 1477453 . - 2 Parent=GSCOCT00007407001 | |
| 53927 chr11 manual_curation CDS 1479103 1479264 . - 2 Parent=GSCOCT00007407001 | |
| 53928 chr11 manual_curation CDS 1479322 1479812 . - 0 Parent=GSCOCT00007407001 | |
| 53929 chr11 manual_curation gene 1551514 1572176 . - . ID=GSCOCG00004210001;Name=Cc11_g00550 | |
| 53930 chr11 manual_curation mRNA 1551514 1572176 . - . ID=GSCOCT00004210001;Parent=GSCOCG00004210001;Name=Cc11_g00550 | |
| 53931 chr11 manual_curation polypeptide 1551751 1572176 . - . ID=GSCOCP00004210001;Dbxref=InterPro:IPR000048,InterPro:IPR001609,PFAM:PF00063,PFAM:PF00612,PRINTS:PR00193,PROFILE:PS50096,SMART:SM00015,SMART:SM00242,SwissProt:Q02440,SwissProt:Q99104,SwissProt:Q9Y4I1,TAIR:AT1G50360.1,TAIR:AT3G19960.2,TAIR:AT5G54280.2,TrEMBL:B0CN62,TrEMBL:B9H5P2,TrEMBL:F6HW23;Derives_from=GSCOCT00004210001;Name=Cc11_g00550;Ontology_term=CC_evidence_code:ISS,GO:0003774,GO:0005524,GO:0016459,CC_EC_number:missing_EC_number,PRODUCT:P-loop containing nucleoside triphosphate hydrolases superfamily protein,CC_functional_completeness:complete,CC_gene:MYO5A,CC_gene:Myo5a;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004210001~ P-loop containing nucleoside triphosphate hydrolases superfamily protein~ MYO5A~ complete;original_location=complement(join(29203..29256%2C28900..29085%2C24533..24634%2C24285..24428%2C24053..24203%2C23940..23967%2C22256..22421%2C22076..22139%2C21940..21953%2C21769..21853%2C21126..21229%2C20825..20963%2C18901..19019%2C18674..18826%2C18466..18555%2C16810..16887%2C15560..15718%2C14787..14993%2C13411..13616%2C13179..13314%2C11718..11847%2C11475..11621%2C10921..10988%2C8831..9490));owner=coffea | |
| 53932 chr11 manual_curation exon 1551514 1552410 . - . Parent=GSCOCT00004210001 | |
| 53933 chr11 manual_curation exon 1553841 1553908 . - . Parent=GSCOCT00004210001 | |
| 53934 chr11 manual_curation exon 1554395 1554541 . - . Parent=GSCOCT00004210001 | |
| 53935 chr11 manual_curation exon 1554638 1554767 . - . Parent=GSCOCT00004210001 | |
| 53936 chr11 manual_curation exon 1556099 1556234 . - . Parent=GSCOCT00004210001 | |
| 53937 chr11 manual_curation exon 1556331 1556536 . - . Parent=GSCOCT00004210001 | |
| 53938 chr11 manual_curation exon 1557707 1557913 . - . Parent=GSCOCT00004210001 | |
| 53939 chr11 manual_curation exon 1558480 1558638 . - . Parent=GSCOCT00004210001 | |
| 53940 chr11 manual_curation exon 1559730 1559807 . - . Parent=GSCOCT00004210001 | |
| 53941 chr11 manual_curation exon 1561386 1561475 . - . Parent=GSCOCT00004210001 | |
| 53942 chr11 manual_curation exon 1561594 1561746 . - . Parent=GSCOCT00004210001 | |
| 53943 chr11 manual_curation exon 1561821 1561939 . - . Parent=GSCOCT00004210001 | |
| 53944 chr11 manual_curation exon 1563745 1563883 . - . Parent=GSCOCT00004210001 | |
| 53945 chr11 manual_curation exon 1564046 1564149 . - . Parent=GSCOCT00004210001 | |
| 53946 chr11 manual_curation exon 1564689 1564773 . - . Parent=GSCOCT00004210001 | |
| 53947 chr11 manual_curation exon 1564860 1564873 . - . Parent=GSCOCT00004210001 | |
| 53948 chr11 manual_curation exon 1564996 1565059 . - . Parent=GSCOCT00004210001 | |
| 53949 chr11 manual_curation exon 1565176 1565341 . - . Parent=GSCOCT00004210001 | |
| 53950 chr11 manual_curation exon 1566860 1566887 . - . Parent=GSCOCT00004210001 | |
| 53951 chr11 manual_curation exon 1566973 1567123 . - . Parent=GSCOCT00004210001 | |
| 53952 chr11 manual_curation exon 1567205 1567348 . - . Parent=GSCOCT00004210001 | |
| 53953 chr11 manual_curation exon 1567453 1567554 . - . Parent=GSCOCT00004210001 | |
| 53954 chr11 manual_curation exon 1571820 1572005 . - . Parent=GSCOCT00004210001 | |
| 53955 chr11 manual_curation exon 1572123 1572176 . - . Parent=GSCOCT00004210001 | |
| 53956 chr11 manual_curation CDS 1551751 1552410 . - 0 Parent=GSCOCT00004210001 | |
| 53957 chr11 manual_curation CDS 1553841 1553908 . - 1 Parent=GSCOCT00004210001 | |
| 53958 chr11 manual_curation CDS 1554395 1554541 . - 1 Parent=GSCOCT00004210001 | |
| 53959 chr11 manual_curation CDS 1554638 1554767 . - 0 Parent=GSCOCT00004210001 | |
| 53960 chr11 manual_curation CDS 1556099 1556234 . - 2 Parent=GSCOCT00004210001 | |
| 53961 chr11 manual_curation CDS 1556331 1556536 . - 0 Parent=GSCOCT00004210001 | |
| 53962 chr11 manual_curation CDS 1557707 1557913 . - 0 Parent=GSCOCT00004210001 | |
| 53963 chr11 manual_curation CDS 1558480 1558638 . - 0 Parent=GSCOCT00004210001 | |
| 53964 chr11 manual_curation CDS 1559730 1559807 . - 0 Parent=GSCOCT00004210001 | |
| 53965 chr11 manual_curation CDS 1561386 1561475 . - 0 Parent=GSCOCT00004210001 | |
| 53966 chr11 manual_curation CDS 1561594 1561746 . - 0 Parent=GSCOCT00004210001 | |
| 53967 chr11 manual_curation CDS 1561821 1561939 . - 1 Parent=GSCOCT00004210001 | |
| 53968 chr11 manual_curation CDS 1563745 1563883 . - 0 Parent=GSCOCT00004210001 | |
| 53969 chr11 manual_curation CDS 1564046 1564149 . - 1 Parent=GSCOCT00004210001 | |
| 53970 chr11 manual_curation CDS 1564689 1564773 . - 0 Parent=GSCOCT00004210001 | |
| 53971 chr11 manual_curation CDS 1564860 1564873 . - 1 Parent=GSCOCT00004210001 | |
| 53972 chr11 manual_curation CDS 1564996 1565059 . - 0 Parent=GSCOCT00004210001 | |
| 53973 chr11 manual_curation CDS 1565176 1565341 . - 2 Parent=GSCOCT00004210001 | |
| 53974 chr11 manual_curation CDS 1566860 1566887 . - 1 Parent=GSCOCT00004210001 | |
| 53975 chr11 manual_curation CDS 1566973 1567123 . - 0 Parent=GSCOCT00004210001 | |
| 53976 chr11 manual_curation CDS 1567205 1567348 . - 0 Parent=GSCOCT00004210001 | |
| 53977 chr11 manual_curation CDS 1567453 1567554 . - 0 Parent=GSCOCT00004210001 | |
| 53978 chr11 manual_curation CDS 1571820 1572005 . - 0 Parent=GSCOCT00004210001 | |
| 53979 chr11 manual_curation CDS 1572123 1572176 . - 0 Parent=GSCOCT00004210001 | |
| 53980 chr11 manual_curation gene 1600430 1601686 . - . ID=GSCOCG00004213001;Name=Cc11_g00560 | |
| 53981 chr11 manual_curation mRNA 1600430 1601686 . - . ID=GSCOCT00004213001;Parent=GSCOCG00004213001;Name=Cc11_g00560 | |
| 53982 chr11 manual_curation polypeptide 1600430 1601686 . - . ID=GSCOCP00004213001;Dbxref=InterPro:IPR001810,InterPro:IPR006527,InterPro:IPR017451,InterPro:IPR022364,PFAM:PF00646,PFAM:PF07734,PROFILE:PS50181,SUPERFAMILY:SSF81383,SwissProt:Q8GXC7,SwissProt:Q9FGY4,SwissProt:Q9SFC7,TAIR:AT3G06240.1,TAIR:AT3G07870.1,TAIR:AT5G49610.1,TIGRFAMs:TIGR01640,TrEMBL:A5C5X2,TrEMBL:B9GTQ9,TrEMBL:B9IAP0;Derives_from=GSCOCT00004213001;Name=Cc11_g00560;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative F-box protein At3g07870,CC_functional_completeness:complete,CC_gene:At3g07870,CC_gene:At3g06240,CC_gene:At5g49610;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004213001~ Putative F-box protein At3g07870~ At3g07870~ complete;original_location=complement(57510..58766);owner=coffea | |
| 53983 chr11 manual_curation exon 1600430 1601686 . - . Parent=GSCOCT00004213001 | |
| 53984 chr11 manual_curation CDS 1600430 1601686 . - 0 Parent=GSCOCT00004213001 | |
| 53985 chr11 manual_curation gene 1605086 1606381 . - . ID=GSCOCG00004214001;Name=Cc11_g00570 | |
| 53986 chr11 manual_curation mRNA 1605086 1606381 . - . ID=GSCOCT00004214001;Parent=GSCOCG00004214001;Name=Cc11_g00570 | |
| 53987 chr11 manual_curation polypeptide 1605086 1606381 . - . ID=GSCOCP00004214001;Dbxref=InterPro:IPR001810,InterPro:IPR006527,InterPro:IPR017451,InterPro:IPR022364,PFAM:PF00646,PFAM:PF07734,PROFILE:PS50181,SMART:SM00256,SUPERFAMILY:SSF81383,SwissProt:Q9LUP5,SwissProt:Q9SFC7,SwissProt:Q9SU30,TAIR:AT3G06240.1,TAIR:AT3G07870.1,TAIR:AT4G12560.1,TIGRFAMs:TIGR01640,TrEMBL:A5C5X2,TrEMBL:B9GTQ9,TrEMBL:B9IAP0;Derives_from=GSCOCT00004214001;Name=Cc11_g00570;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative F-box protein At3g07870,CC_functional_completeness:complete,CC_gene:At3g07870,CC_gene:CPR30,CC_gene:At3g17530;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004214001~ Putative F-box protein At3g07870~ At3g07870~ complete;original_location=complement(62166..63461);owner=coffea | |
| 53988 chr11 manual_curation exon 1605086 1606381 . - . Parent=GSCOCT00004214001 | |
| 53989 chr11 manual_curation CDS 1605086 1606381 . - 0 Parent=GSCOCT00004214001 | |
| 53990 chr11 manual_curation gene 1655080 1655369 . + . ID=GSCOCG00004217001;Name=Cc11_g00580 | |
| 53991 chr11 manual_curation mRNA 1655080 1655369 . + . ID=GSCOCT00004217001;Parent=GSCOCG00004217001;Name=Cc11_g00580 | |
| 53992 chr11 manual_curation polypeptide 1655080 1655369 . + . ID=GSCOCP00004217001;Derives_from=GSCOCT00004217001;Name=Cc11_g00580;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004217001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(112160..112186%2C112249..112320%2C112417..112449);owner=coffea | |
| 53993 chr11 manual_curation exon 1655080 1655106 . + . Parent=GSCOCT00004217001 | |
| 53994 chr11 manual_curation exon 1655169 1655240 . + . Parent=GSCOCT00004217001 | |
| 53995 chr11 manual_curation exon 1655337 1655369 . + . Parent=GSCOCT00004217001 | |
| 53996 chr11 manual_curation CDS 1655080 1655106 . + 0 Parent=GSCOCT00004217001 | |
| 53997 chr11 manual_curation CDS 1655169 1655240 . + 0 Parent=GSCOCT00004217001 | |
| 53998 chr11 manual_curation CDS 1655337 1655369 . + 0 Parent=GSCOCT00004217001 | |
| 53999 chr11 manual_curation gene 1663285 1664190 . + . ID=GSCOCG00004218001;Name=Cc11_g00590 | |
| 54000 chr11 manual_curation mRNA 1663285 1664190 . + . ID=GSCOCT00004218001;Parent=GSCOCG00004218001;Name=Cc11_g00590 | |
| 54001 chr11 manual_curation polypeptide 1663285 1663488 . + . ID=GSCOCP00004218001;Derives_from=GSCOCT00004218001;Name=Cc11_g00590;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004218001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=120365..120568;owner=coffea | |
| 54002 chr11 manual_curation exon 1663285 1664190 . + . Parent=GSCOCT00004218001 | |
| 54003 chr11 manual_curation CDS 1663285 1663488 . + 0 Parent=GSCOCT00004218001 | |
| 54004 chr11 manual_curation gene 1740744 1754163 . + . ID=GSCOCG00004220001;Name=Cc11_g00600 | |
| 54005 chr11 manual_curation mRNA 1740744 1754163 . + . ID=GSCOCT00004220001;Parent=GSCOCG00004220001;Name=Cc11_g00600 | |
| 54006 chr11 manual_curation polypeptide 1740994 1753383 . + . ID=GSCOCP00004220001;Dbxref=GENE3D:G3DSA:3.20.20.70,InterPro:IPR001295,InterPro:IPR005719,InterPro:IPR012135,InterPro:IPR013785,PFAM:PF01180,PROSITE:PS00911,PROSITE:PS00912,SwissProt:O35435,SwissProt:P32746,SwissProt:Q63707,TAIR:AT5G23300.1,TIGRFAMs:TIGR01036,TrEMBL:B9H5P7,TrEMBL:I1LF90,TrEMBL:I1NF53;Derives_from=GSCOCT00004220001;Name=Cc11_g00600;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004152,GO:0004158,GO:0006207,GO:0006222,GO:0008152,GO:0016020,GO:0055114,CC_EC_number:1.3.3.1,CC_EC_number:1.3.3.1,PRODUCT:Dihydroorotate dehydrogenase (quinone)%2C mitochondrial,CC_functional_completeness:complete,CC_gene:PYRD,CC_gene:Dhodh;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004220001~ Dihydroorotate dehydrogenase (quinone)%2C mitochondrial~ PYRD~ complete;original_location=join(198074..198238%2C198663..198745%2C200800..201123%2C201277..201529%2C206244..206324%2C206418..206525%2C206598..206627%2C208276..208413%2C208734..208771%2C208871..208970%2C210389..210463);owner=coffea | |
| 54007 chr11 manual_curation exon 1753783 1754163 . + . Parent=GSCOCT00004220001 | |
| 54008 chr11 manual_curation exon 1740744 1741158 . + . Parent=GSCOCT00004220001 | |
| 54009 chr11 manual_curation exon 1741583 1741665 . + . Parent=GSCOCT00004220001 | |
| 54010 chr11 manual_curation exon 1743720 1744043 . + . Parent=GSCOCT00004220001 | |
| 54011 chr11 manual_curation exon 1744197 1744449 . + . Parent=GSCOCT00004220001 | |
| 54012 chr11 manual_curation exon 1749164 1749244 . + . Parent=GSCOCT00004220001 | |
| 54013 chr11 manual_curation exon 1749338 1749445 . + . Parent=GSCOCT00004220001 | |
| 54014 chr11 manual_curation exon 1749518 1749547 . + . Parent=GSCOCT00004220001 | |
| 54015 chr11 manual_curation exon 1751196 1751333 . + . Parent=GSCOCT00004220001 | |
| 54016 chr11 manual_curation exon 1751654 1751691 . + . Parent=GSCOCT00004220001 | |
| 54017 chr11 manual_curation exon 1751791 1751890 . + . Parent=GSCOCT00004220001 | |
| 54018 chr11 manual_curation exon 1753309 1753420 . + . Parent=GSCOCT00004220001 | |
| 54019 chr11 manual_curation CDS 1740994 1741158 . + 0 Parent=GSCOCT00004220001 | |
| 54020 chr11 manual_curation CDS 1741583 1741665 . + 0 Parent=GSCOCT00004220001 | |
| 54021 chr11 manual_curation CDS 1743720 1744043 . + 2 Parent=GSCOCT00004220001 | |
| 54022 chr11 manual_curation CDS 1744197 1744449 . + 2 Parent=GSCOCT00004220001 | |
| 54023 chr11 manual_curation CDS 1749164 1749244 . + 0 Parent=GSCOCT00004220001 | |
| 54024 chr11 manual_curation CDS 1749338 1749445 . + 0 Parent=GSCOCT00004220001 | |
| 54025 chr11 manual_curation CDS 1749518 1749547 . + 0 Parent=GSCOCT00004220001 | |
| 54026 chr11 manual_curation CDS 1751196 1751333 . + 0 Parent=GSCOCT00004220001 | |
| 54027 chr11 manual_curation CDS 1751654 1751691 . + 0 Parent=GSCOCT00004220001 | |
| 54028 chr11 manual_curation CDS 1751791 1751890 . + 2 Parent=GSCOCT00004220001 | |
| 54029 chr11 manual_curation CDS 1753309 1753383 . + 0 Parent=GSCOCT00004220001 | |
| 54030 chr11 manual_curation gene 1755310 1757692 . - . ID=GSCOCG00004222001;Name=Cc11_g00610 | |
| 54031 chr11 manual_curation mRNA 1755310 1757692 . - . ID=GSCOCT00004222001;Parent=GSCOCG00004222001;Name=Cc11_g00610 | |
| 54032 chr11 manual_curation polypeptide 1755310 1757544 . - . ID=GSCOCP00004222001;Dbxref=InterPro:IPR006424,InterPro:IPR020828,InterPro:IPR020829,InterPro:IPR020830,InterPro:IPR020831,PANTHER:PTHR10836,PFAM:PF00044,PFAM:PF02800,PIR:PIRSF000149,PRINTS:PR00078,PROSITE:PS00071,SMART:SM00846,SwissProt:P09043,SwissProt:P12858,SwissProt:P19866,TAIR:AT1G12900.1,TAIR:AT1G42970.1,TAIR:AT3G26650.1,TIGRFAMs:TIGR01534,TrEMBL:B9RGT1,TrEMBL:F8UX79,TrEMBL:H8WR55;Derives_from=GSCOCT00004222001;Name=Cc11_g00610;Ontology_term=CC_evidence_code:ISS,GO:0006006,GO:0008943,GO:0051287,GO:0055114,CC_EC_number:1.2.1.13,PRODUCT:Glyceraldehyde-3-phosphate dehydrogenase A%2C chloroplastic,CC_functional_completeness:complete,CC_gene:GAPA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004222001~ Glyceraldehyde-3-phosphate dehydrogenase A%2C chloroplastic~ GAPA~ complete;original_location=complement(join(214583..214624%2C214356..214466%2C213365..213663%2C213008..213252%2C212474..212892%2C212390..212434));owner=coffea | |
| 54033 chr11 manual_curation exon 1755310 1755354 . - . Parent=GSCOCT00004222001 | |
| 54034 chr11 manual_curation exon 1755394 1755812 . - . Parent=GSCOCT00004222001 | |
| 54035 chr11 manual_curation exon 1755928 1756172 . - . Parent=GSCOCT00004222001 | |
| 54036 chr11 manual_curation exon 1756285 1756583 . - . Parent=GSCOCT00004222001 | |
| 54037 chr11 manual_curation exon 1757276 1757386 . - . Parent=GSCOCT00004222001 | |
| 54038 chr11 manual_curation exon 1757503 1757692 . - . Parent=GSCOCT00004222001 | |
| 54039 chr11 manual_curation CDS 1755310 1755354 . - 0 Parent=GSCOCT00004222001 | |
| 54040 chr11 manual_curation CDS 1755394 1755812 . - 1 Parent=GSCOCT00004222001 | |
| 54041 chr11 manual_curation CDS 1755928 1756172 . - 2 Parent=GSCOCT00004222001 | |
| 54042 chr11 manual_curation CDS 1756285 1756583 . - 0 Parent=GSCOCT00004222001 | |
| 54043 chr11 manual_curation CDS 1757276 1757386 . - 0 Parent=GSCOCT00004222001 | |
| 54044 chr11 manual_curation CDS 1757503 1757544 . - 0 Parent=GSCOCT00004222001 | |
| 54045 chr11 manual_curation gene 1769798 1770466 . - . ID=GSCOCG00004223001;Name=Cc11_g00620 | |
| 54046 chr11 manual_curation mRNA 1769798 1770466 . - . ID=GSCOCT00004223001;Parent=GSCOCG00004223001;Name=Cc11_g00620 | |
| 54047 chr11 manual_curation polypeptide 1769798 1770466 . - . ID=GSCOCP00004223001;Dbxref=GENE3D:G3DSA:3.40.1180.10,InterPro:IPR001441,PANTHER:PTHR10291,PFAM:PF01255,SUPERFAMILY:SSF64005,SwissProt:Q8LAR7,SwissProt:Q8LED0,SwissProt:Q8S2T1,TAIR:AT2G17570.1,TAIR:AT5G60500.1,TAIR:AT5G60510.1,TrEMBL:A5BJ50,TrEMBL:F6HZI4,TrEMBL:Q8H984;Derives_from=GSCOCT00004223001;Name=Cc11_g00620;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.5.1.31,PRODUCT:Dehydrodolichyl diphosphate synthase 6,CC_functional_completeness:fragment,CC_gene:At2g17570,CC_gene:At5g60510,CC_gene:At5g60500;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004223001~ Dehydrodolichyl diphosphate synthase 6~ At2g17570~ fragment;original_location=complement(226878..227546);owner=coffea | |
| 54048 chr11 manual_curation exon 1769798 1770466 . - . Parent=GSCOCT00004223001 | |
| 54049 chr11 manual_curation CDS 1769798 1770466 . - 0 Parent=GSCOCT00004223001 | |
| 54050 chr11 manual_curation gene 1771439 1774171 . - . ID=GSCOCG00004224001;Name=Cc11_g00630 | |
| 54051 chr11 manual_curation mRNA 1771439 1774171 . - . ID=GSCOCT00004224001;Parent=GSCOCG00004224001;Name=Cc11_g00630 | |
| 54052 chr11 manual_curation polypeptide 1771548 1773974 . - . ID=GSCOCP00004224001;Dbxref=TAIR:AT2G17350.1,TrEMBL:A5AV01,TrEMBL:B9HPM9,TrEMBL:B9RKZ1;Derives_from=GSCOCT00004224001;Name=Cc11_g00630;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B Has 119 Blast hits to 93 proteins in 40 species,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004224001~ unknown protein%3B Has 119 Blast hits to 93 proteins in 40 species: Archae - 0%3B Bacteria - 3%3B Metazoa - 18%3B Fungi - 12%3B Plants - 44%3B Viruses - 0%3B Other Eukaryotes - 42 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(230875..231054%2C228628..228801));owner=coffea | |
| 54053 chr11 manual_curation exon 1771439 1771721 . - . Parent=GSCOCT00004224001 | |
| 54054 chr11 manual_curation exon 1773795 1774171 . - . Parent=GSCOCT00004224001 | |
| 54055 chr11 manual_curation CDS 1771548 1771721 . - 0 Parent=GSCOCT00004224001 | |
| 54056 chr11 manual_curation CDS 1773795 1773974 . - 0 Parent=GSCOCT00004224001 | |
| 54057 chr11 manual_curation gene 1774265 1779838 . - . ID=GSCOCG00004225001;Name=Cc11_g00640 | |
| 54058 chr11 manual_curation mRNA 1774265 1779838 . - . ID=GSCOCT00004225001;Parent=GSCOCG00004225001;Name=Cc11_g00640 | |
| 54059 chr11 manual_curation polypeptide 1774395 1779838 . - . ID=GSCOCP00004225001;Derives_from=GSCOCT00004225001;Name=Cc11_g00640;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004225001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(236905..236918%2C236696..236822%2C236498..236598%2C231475..231532));owner=coffea | |
| 54060 chr11 manual_curation exon 1774265 1774452 . - . Parent=GSCOCT00004225001 | |
| 54061 chr11 manual_curation exon 1779418 1779518 . - . Parent=GSCOCT00004225001 | |
| 54062 chr11 manual_curation exon 1779616 1779742 . - . Parent=GSCOCT00004225001 | |
| 54063 chr11 manual_curation exon 1779825 1779838 . - . Parent=GSCOCT00004225001 | |
| 54064 chr11 manual_curation CDS 1774395 1774452 . - 2 Parent=GSCOCT00004225001 | |
| 54065 chr11 manual_curation CDS 1779418 1779518 . - 0 Parent=GSCOCT00004225001 | |
| 54066 chr11 manual_curation CDS 1779616 1779742 . - 2 Parent=GSCOCT00004225001 | |
| 54067 chr11 manual_curation CDS 1779825 1779838 . - 0 Parent=GSCOCT00004225001 | |
| 54068 chr11 manual_curation gene 1787481 1791222 . + . ID=GSCOCG00004226001;Name=Cc11_g00650 | |
| 54069 chr11 manual_curation mRNA 1787481 1791222 . + . ID=GSCOCT00004226001;Parent=GSCOCG00004226001;Name=Cc11_g00650 | |
| 54070 chr11 manual_curation polypeptide 1787481 1791222 . + . ID=GSCOCP00004226001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,PFAM:PF00560,SMART:SM00369,SwissProt:Q8L899,SwissProt:Q9LJF3,SwissProt:Q9ZWC8,TAIR:AT2G25470.1,TAIR:AT3G53240.1,TAIR:AT5G49290.1,TrEMBL:B9RVA8,TrEMBL:G7JP62,TrEMBL:G7ZXW6;Derives_from=GSCOCT00004226001;Name=Cc11_g00650;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative Serine/threonine-protein kinase BRI1-like 1,CC_functional_completeness:complete,CC_gene:BRL1,CC_gene:BRL3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004226001~ Putative Serine/threonine-protein kinase BRI1-like 1~ BRL1~ complete;original_location=join(244561..244573%2C244796..244870%2C245410..245547%2C245769..246518%2C246551..246806%2C247110..247228%2C247419..247544%2C247614..248302);owner=coffea | |
| 54071 chr11 manual_curation exon 1787481 1787493 . + . Parent=GSCOCT00004226001 | |
| 54072 chr11 manual_curation exon 1787716 1787790 . + . Parent=GSCOCT00004226001 | |
| 54073 chr11 manual_curation exon 1788330 1788467 . + . Parent=GSCOCT00004226001 | |
| 54074 chr11 manual_curation exon 1788689 1789438 . + . Parent=GSCOCT00004226001 | |
| 54075 chr11 manual_curation exon 1789471 1789726 . + . Parent=GSCOCT00004226001 | |
| 54076 chr11 manual_curation exon 1790030 1790148 . + . Parent=GSCOCT00004226001 | |
| 54077 chr11 manual_curation exon 1790339 1790464 . + . Parent=GSCOCT00004226001 | |
| 54078 chr11 manual_curation exon 1790534 1791222 . + . Parent=GSCOCT00004226001 | |
| 54079 chr11 manual_curation CDS 1787481 1787493 . + 0 Parent=GSCOCT00004226001 | |
| 54080 chr11 manual_curation CDS 1787716 1787790 . + 1 Parent=GSCOCT00004226001 | |
| 54081 chr11 manual_curation CDS 1788330 1788467 . + 1 Parent=GSCOCT00004226001 | |
| 54082 chr11 manual_curation CDS 1788689 1789438 . + 1 Parent=GSCOCT00004226001 | |
| 54083 chr11 manual_curation CDS 1789471 1789726 . + 1 Parent=GSCOCT00004226001 | |
| 54084 chr11 manual_curation CDS 1790030 1790148 . + 2 Parent=GSCOCT00004226001 | |
| 54085 chr11 manual_curation CDS 1790339 1790464 . + 1 Parent=GSCOCT00004226001 | |
| 54086 chr11 manual_curation CDS 1790534 1791222 . + 1 Parent=GSCOCT00004226001 | |
| 54087 chr11 manual_curation gene 1891257 1891675 . - . ID=GSCOCG00004227001;Name=Cc11_g00660 | |
| 54088 chr11 manual_curation mRNA 1891257 1891675 . - . ID=GSCOCT00004227001;Parent=GSCOCG00004227001;Name=Cc11_g00660 | |
| 54089 chr11 manual_curation polypeptide 1891257 1891675 . - . ID=GSCOCP00004227001;Derives_from=GSCOCT00004227001;Name=Cc11_g00660;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004227001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(348748..348755%2C348573..348652%2C348337..348368));owner=coffea | |
| 54090 chr11 manual_curation exon 1891257 1891288 . - . Parent=GSCOCT00004227001 | |
| 54091 chr11 manual_curation exon 1891493 1891572 . - . Parent=GSCOCT00004227001 | |
| 54092 chr11 manual_curation exon 1891668 1891675 . - . Parent=GSCOCT00004227001 | |
| 54093 chr11 manual_curation CDS 1891257 1891288 . - 1 Parent=GSCOCT00004227001 | |
| 54094 chr11 manual_curation CDS 1891493 1891572 . - 2 Parent=GSCOCT00004227001 | |
| 54095 chr11 manual_curation CDS 1891668 1891675 . - 0 Parent=GSCOCT00004227001 | |
| 54096 chr11 manual_curation gene 1894925 1896099 . - . ID=GSCOCG00004228001;Name=Cc11_g00670 | |
| 54097 chr11 manual_curation mRNA 1894925 1896099 . - . ID=GSCOCT00004228001;Parent=GSCOCG00004228001;Name=Cc11_g00670 | |
| 54098 chr11 manual_curation polypeptide 1894925 1895958 . - . ID=GSCOCP00004228001;Dbxref=InterPro:IPR000582,PFAM:PF00887;Derives_from=GSCOCT00004228001;Name=Cc11_g00670;Ontology_term=CC_evidence_code:ISS,GO:0000062,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004228001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(352811..353038%2C352603..352679%2C352176..352239%2C352005..352088));owner=coffea | |
| 54099 chr11 manual_curation exon 1894925 1895008 . - . Parent=GSCOCT00004228001 | |
| 54100 chr11 manual_curation exon 1895096 1895159 . - . Parent=GSCOCT00004228001 | |
| 54101 chr11 manual_curation exon 1895523 1895599 . - . Parent=GSCOCT00004228001 | |
| 54102 chr11 manual_curation exon 1895731 1896099 . - . Parent=GSCOCT00004228001 | |
| 54103 chr11 manual_curation CDS 1894925 1895008 . - 0 Parent=GSCOCT00004228001 | |
| 54104 chr11 manual_curation CDS 1895096 1895159 . - 2 Parent=GSCOCT00004228001 | |
| 54105 chr11 manual_curation CDS 1895523 1895599 . - 0 Parent=GSCOCT00004228001 | |
| 54106 chr11 manual_curation CDS 1895731 1895958 . - 0 Parent=GSCOCT00004228001 | |
| 54107 chr11 manual_curation gene 1994603 1997458 . - . ID=GSCOCG00019773001;Name=Cc11_g00680 | |
| 54108 chr11 manual_curation mRNA 1994603 1997458 . - . ID=GSCOCT00019773001;Parent=GSCOCG00019773001;Name=Cc11_g00680 | |
| 54109 chr11 manual_curation polypeptide 1994603 1997458 . - . ID=GSCOCP00019773001;Dbxref=InterPro:IPR019557,PFAM:PF10536,SwissProt:Q9LNG5,TAIR:AT1G48120.1,TAIR:AT2G04865.1,TAIR:AT2G25010.1,TrEMBL:A5AMH2,TrEMBL:A5AU60,TrEMBL:A5BXI2;Derives_from=GSCOCT00019773001;Name=Cc11_g00680;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:At1g48120;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019773001~ Putative uncharacterized protein~ At1g48120~ fragment;original_location=join(3937871..3938027%2C3938878..3939272%2C3939630..3939740%2C3940274..3940359%2C3940450..3940726);owner=coffea | |
| 54110 chr11 manual_curation exon 1997302 1997458 . - . Parent=GSCOCT00019773001 | |
| 54111 chr11 manual_curation exon 1996057 1996451 . - . Parent=GSCOCT00019773001 | |
| 54112 chr11 manual_curation exon 1995589 1995699 . - . Parent=GSCOCT00019773001 | |
| 54113 chr11 manual_curation exon 1994970 1995055 . - . Parent=GSCOCT00019773001 | |
| 54114 chr11 manual_curation exon 1994603 1994879 . - . Parent=GSCOCT00019773001 | |
| 54115 chr11 manual_curation CDS 1997302 1997458 . - 0 Parent=GSCOCT00019773001 | |
| 54116 chr11 manual_curation CDS 1996057 1996451 . - 1 Parent=GSCOCT00019773001 | |
| 54117 chr11 manual_curation CDS 1995589 1995699 . - 0 Parent=GSCOCT00019773001 | |
| 54118 chr11 manual_curation CDS 1994970 1995055 . - 0 Parent=GSCOCT00019773001 | |
| 54119 chr11 manual_curation CDS 1994603 1994879 . - 2 Parent=GSCOCT00019773001 | |
| 54120 chr11 manual_curation gene 2125784 2126200 . + . ID=GSCOCG00019771001;Name=Cc11_g00690 | |
| 54121 chr11 manual_curation mRNA 2125784 2126200 . + . ID=GSCOCT00019771001;Parent=GSCOCG00019771001;Name=Cc11_g00690 | |
| 54122 chr11 manual_curation polypeptide 2125784 2126200 . + . ID=GSCOCP00019771001;Dbxref=SwissProt:Q9C801,TAIR:AT1G33520.1,TrEMBL:B9SAH9,TrEMBL:D7KJ78,TrEMBL:E4MXM1;Derives_from=GSCOCT00019771001;Name=Cc11_g00690;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:MOS2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019771001~ Hypothetical protein~ MOS2~ missing_functional_completeness;original_location=complement(3809129..3809545);owner=coffea | |
| 54123 chr11 manual_curation exon 2125784 2126200 . + . Parent=GSCOCT00019771001 | |
| 54124 chr11 manual_curation CDS 2125784 2126200 . + 0 Parent=GSCOCT00019771001 | |
| 54125 chr11 manual_curation gene 2153864 2161259 . + . ID=GSCOCG00019769001;Name=Cc11_g00700 | |
| 54126 chr11 manual_curation mRNA 2153864 2161259 . + . ID=GSCOCT00019769001;Parent=GSCOCG00019769001;Name=Cc11_g00700 | |
| 54127 chr11 manual_curation polypeptide 2153864 2160825 . + . ID=GSCOCP00019769001;Dbxref=InterPro:IPR000157,InterPro:IPR000767,InterPro:IPR001611,InterPro:IPR002182,PFAM:PF00560,PFAM:PF00931,PFAM:PF01582,PRINTS:PR00364,PROFILE:PS50104,SMART:SM00255,SUPERFAMILY:SSF52200,SwissProt:O23530,SwissProt:O82500,SwissProt:Q40392,TAIR:AT4G12010.1,TAIR:AT5G17680.1,TAIR:AT5G36930.2,TrEMBL:Q6XZH5,TrEMBL:Q6XZH6,TrEMBL:Q6XZH8;Derives_from=GSCOCT00019769001;Name=Cc11_g00700;Ontology_term=CC_evidence_code:ISS,GO:0004888,GO:0005515,GO:0005524,GO:0006915,GO:0006952,GO:0007165,GO:0031224,GO:0045087,CC_EC_number:missing_EC_number,PRODUCT:Putative TMV resistance protein N,CC_functional_completeness:complete,CC_gene:N,CC_gene:At4g11170,CC_gene:SNC1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019769001~ Putative TMV resistance protein N~ N~ complete;original_location=complement(join(3780936..3781465%2C3777767..3778349%2C3776898..3777398%2C3776492..3776767%2C3775271..3776359%2C3774504..3775130));owner=coffea | |
| 54128 chr11 manual_curation exon 2160199 2161259 . + . Parent=GSCOCT00019769001 | |
| 54129 chr11 manual_curation exon 2158970 2160058 . + . Parent=GSCOCT00019769001 | |
| 54130 chr11 manual_curation exon 2158562 2158837 . + . Parent=GSCOCT00019769001 | |
| 54131 chr11 manual_curation exon 2157931 2158431 . + . Parent=GSCOCT00019769001 | |
| 54132 chr11 manual_curation exon 2156980 2157562 . + . Parent=GSCOCT00019769001 | |
| 54133 chr11 manual_curation exon 2153864 2154393 . + . Parent=GSCOCT00019769001 | |
| 54134 chr11 manual_curation CDS 2160199 2160825 . + 0 Parent=GSCOCT00019769001 | |
| 54135 chr11 manual_curation CDS 2158970 2160058 . + 0 Parent=GSCOCT00019769001 | |
| 54136 chr11 manual_curation CDS 2158562 2158837 . + 0 Parent=GSCOCT00019769001 | |
| 54137 chr11 manual_curation CDS 2157931 2158431 . + 0 Parent=GSCOCT00019769001 | |
| 54138 chr11 manual_curation CDS 2156980 2157562 . + 2 Parent=GSCOCT00019769001 | |
| 54139 chr11 manual_curation CDS 2153864 2154393 . + 0 Parent=GSCOCT00019769001 | |
| 54140 chr11 manual_curation gene 2177404 2178470 . - . ID=GSCOCG00019768001;Name=Cc11_g00710 | |
| 54141 chr11 manual_curation mRNA 2177404 2178470 . - . ID=GSCOCT00019768001;Parent=GSCOCG00019768001;Name=Cc11_g00710 | |
| 54142 chr11 manual_curation polypeptide 2177404 2178470 . - . ID=GSCOCP00019768001;Dbxref=InterPro:IPR014020,PROFILE:PS51182,TAIR:AT3G19420.1,TAIR:AT3G50110.1,TrEMBL:B9SFZ6,TrEMBL:D7L9Z1,TrEMBL:G7K591;Derives_from=GSCOCT00019768001;Name=Cc11_g00710;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019768001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(3756859..3756915%2C3757094..3757224%2C3757616..3757925);owner=coffea | |
| 54143 chr11 manual_curation exon 2178414 2178470 . - . Parent=GSCOCT00019768001 | |
| 54144 chr11 manual_curation exon 2178105 2178235 . - . Parent=GSCOCT00019768001 | |
| 54145 chr11 manual_curation exon 2177404 2177713 . - . Parent=GSCOCT00019768001 | |
| 54146 chr11 manual_curation CDS 2178414 2178470 . - 0 Parent=GSCOCT00019768001 | |
| 54147 chr11 manual_curation CDS 2178105 2178235 . - 0 Parent=GSCOCT00019768001 | |
| 54148 chr11 manual_curation CDS 2177404 2177713 . - 2 Parent=GSCOCT00019768001 | |
| 54149 chr11 manual_curation gene 2194621 2197168 . - . ID=GSCOCG00019767001;Name=Cc11_g00720 | |
| 54150 chr11 manual_curation mRNA 2194621 2197168 . - . ID=GSCOCT00019767001;Parent=GSCOCG00019767001;Name=Cc11_g00720 | |
| 54151 chr11 manual_curation polypeptide 2194621 2197168 . - . ID=GSCOCP00019767001;Dbxref=InterPro:IPR001611,PFAM:PF00560,SwissProt:Q40392,SwissProt:Q9FH83,SwissProt:Q9SZ67,TAIR:AT3G44480.1,TAIR:AT4G12010.1,TAIR:AT5G36930.2,TrEMBL:Q6XZH4,TrEMBL:Q6XZH6,TrEMBL:Q6XZH8;Derives_from=GSCOCT00019767001;Name=Cc11_g00720;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative Nematode resistance-like protein (Fragment),CC_functional_completeness:fragment,CC_gene:N,CC_gene:WRKY19,CC_gene:WRKY52;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019767001~ Putative Nematode resistance-like protein (Fragment)~ N~ fragment;original_location=join(3738161..3738355%2C3738461..3738644%2C3739329..3739406%2C3739456..3739614%2C3739681..3740031%2C3740218..3740708);owner=coffea | |
| 54152 chr11 manual_curation exon 2196974 2197168 . - . Parent=GSCOCT00019767001 | |
| 54153 chr11 manual_curation exon 2196685 2196868 . - . Parent=GSCOCT00019767001 | |
| 54154 chr11 manual_curation exon 2195923 2196000 . - . Parent=GSCOCT00019767001 | |
| 54155 chr11 manual_curation exon 2195715 2195873 . - . Parent=GSCOCT00019767001 | |
| 54156 chr11 manual_curation exon 2195298 2195648 . - . Parent=GSCOCT00019767001 | |
| 54157 chr11 manual_curation exon 2194621 2195111 . - . Parent=GSCOCT00019767001 | |
| 54158 chr11 manual_curation CDS 2196974 2197168 . - 0 Parent=GSCOCT00019767001 | |
| 54159 chr11 manual_curation CDS 2196685 2196868 . - 0 Parent=GSCOCT00019767001 | |
| 54160 chr11 manual_curation CDS 2195923 2196000 . - 1 Parent=GSCOCT00019767001 | |
| 54161 chr11 manual_curation CDS 2195715 2195873 . - 1 Parent=GSCOCT00019767001 | |
| 54162 chr11 manual_curation CDS 2195298 2195648 . - 1 Parent=GSCOCT00019767001 | |
| 54163 chr11 manual_curation CDS 2194621 2195111 . - 1 Parent=GSCOCT00019767001 | |
| 54164 chr11 manual_curation gene 2234636 2237145 . - . ID=GSCOCG00019765001;Name=Cc11_g00730 | |
| 54165 chr11 manual_curation mRNA 2234636 2237145 . - . ID=GSCOCT00019765001;Parent=GSCOCG00019765001;Name=Cc11_g00730 | |
| 54166 chr11 manual_curation polypeptide 2235461 2237145 . - . ID=GSCOCP00019765001;Dbxref=GENE3D:G3DSA:2.40.50.140,InterPro:IPR000289,InterPro:IPR012340,InterPro:IPR016027,PANTHER:PTHR10769,PFAM:PF01200,PRODOM:PD005541,PROSITE:PS00961,SUPERFAMILY:SSF50249,SwissProt:P62858,SwissProt:P62859,SwissProt:Q6PBK3,SwissProt:Q6QAT1,SwissProt:Q90YP3,TrEMBL:F6HLE9,TrEMBL:I1M3W0;Derives_from=GSCOCT00019765001;Name=Cc11_g00730;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:40S ribosomal protein S28,CC_functional_completeness:modules,CC_gene:RPS28,CC_gene:RPS28C,CC_gene:RPS28A,CC_gene:rps28,CC_gene:Rps28;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019765001~ 40S ribosomal protein S28~ RPS28~ modules;original_location=join(3698184..3698251%2C3698462..3698551%2C3699670..3699868);owner=coffea | |
| 54167 chr11 manual_curation exon 2237078 2237145 . - . Parent=GSCOCT00019765001 | |
| 54168 chr11 manual_curation exon 2236778 2236867 . - . Parent=GSCOCT00019765001 | |
| 54169 chr11 manual_curation exon 2234636 2235659 . - . Parent=GSCOCT00019765001 | |
| 54170 chr11 manual_curation CDS 2237078 2237145 . - 0 Parent=GSCOCT00019765001 | |
| 54171 chr11 manual_curation CDS 2236778 2236867 . - 2 Parent=GSCOCT00019765001 | |
| 54172 chr11 manual_curation CDS 2235461 2235659 . - 2 Parent=GSCOCT00019765001 | |
| 54173 chr11 manual_curation gene 2258295 2259862 . - . ID=GSCOCG00019764001;Name=Cc11_g00740 | |
| 54174 chr11 manual_curation mRNA 2258295 2259862 . - . ID=GSCOCT00019764001;Parent=GSCOCG00019764001;Name=Cc11_g00740 | |
| 54175 chr11 manual_curation polypeptide 2258295 2259862 . - . ID=GSCOCP00019764001;Dbxref=InterPro:IPR000330,PFAM:PF00176,SwissProt:Q9FIY7,TAIR:AT5G43530.1,TrEMBL:B9STJ2,TrEMBL:D7MP52,TrEMBL:F6H8H8;Derives_from=GSCOCT00019764001;Name=Cc11_g00740;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0005524,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:At5g43530;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019764001~ Hypothetical protein~ At5g43530~ missing_functional_completeness;original_location=join(3675467..3675559%2C3675617..3675678%2C3675776..3675842%2C3675893..3676021%2C3676879..3677034);owner=coffea | |
| 54176 chr11 manual_curation exon 2259770 2259862 . - . Parent=GSCOCT00019764001 | |
| 54177 chr11 manual_curation exon 2259651 2259712 . - . Parent=GSCOCT00019764001 | |
| 54178 chr11 manual_curation exon 2259487 2259553 . - . Parent=GSCOCT00019764001 | |
| 54179 chr11 manual_curation exon 2259308 2259436 . - . Parent=GSCOCT00019764001 | |
| 54180 chr11 manual_curation exon 2258295 2258450 . - . Parent=GSCOCT00019764001 | |
| 54181 chr11 manual_curation CDS 2259770 2259862 . - 0 Parent=GSCOCT00019764001 | |
| 54182 chr11 manual_curation CDS 2259651 2259712 . - 0 Parent=GSCOCT00019764001 | |
| 54183 chr11 manual_curation CDS 2259487 2259553 . - 2 Parent=GSCOCT00019764001 | |
| 54184 chr11 manual_curation CDS 2259308 2259436 . - 0 Parent=GSCOCT00019764001 | |
| 54185 chr11 manual_curation CDS 2258295 2258450 . - 0 Parent=GSCOCT00019764001 | |
| 54186 chr11 manual_curation gene 2307559 2310496 . + . ID=GSCOCG00019761001;Name=Cc11_g00750 | |
| 54187 chr11 manual_curation mRNA 2307559 2310496 . + . ID=GSCOCT00019761001;Parent=GSCOCG00019761001;Name=Cc11_g00750 | |
| 54188 chr11 manual_curation polypeptide 2307559 2310496 . + . ID=GSCOCP00019761001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR002902,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF01657,PROFILE:PS50011,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:O65468,SwissProt:Q8GYA4,SwissProt:Q9M0X5,TAIR:AT4G05200.1,TAIR:AT4G23160.1,TAIR:AT4G23180.1,TrEMBL:B9HZN4,TrEMBL:F6HJ09,TrEMBL:I1JAW6;Derives_from=GSCOCT00019761001;Name=Cc11_g00750;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Cysteine-rich receptor-like protein kinase 10,CC_functional_completeness:complete,CC_gene:CRK10,CC_gene:CRK25,CC_gene:CRK8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019761001~ Cysteine-rich receptor-like protein kinase 10~ CRK10~ complete;original_location=complement(join(3627068..3627770%2C3626856..3626904%2C3626499..3626623%2C3626273..3626394%2C3625964..3626174%2C3625608..3625845%2C3625280..3625430%2C3624833..3625168));owner=coffea | |
| 54189 chr11 manual_curation exon 2310161 2310496 . + . Parent=GSCOCT00019761001 | |
| 54190 chr11 manual_curation exon 2309899 2310049 . + . Parent=GSCOCT00019761001 | |
| 54191 chr11 manual_curation exon 2309484 2309721 . + . Parent=GSCOCT00019761001 | |
| 54192 chr11 manual_curation exon 2309155 2309365 . + . Parent=GSCOCT00019761001 | |
| 54193 chr11 manual_curation exon 2308935 2309056 . + . Parent=GSCOCT00019761001 | |
| 54194 chr11 manual_curation exon 2308706 2308830 . + . Parent=GSCOCT00019761001 | |
| 54195 chr11 manual_curation exon 2308425 2308473 . + . Parent=GSCOCT00019761001 | |
| 54196 chr11 manual_curation exon 2307559 2308261 . + . Parent=GSCOCT00019761001 | |
| 54197 chr11 manual_curation CDS 2310161 2310496 . + 0 Parent=GSCOCT00019761001 | |
| 54198 chr11 manual_curation CDS 2309899 2310049 . + 2 Parent=GSCOCT00019761001 | |
| 54199 chr11 manual_curation CDS 2309484 2309721 . + 1 Parent=GSCOCT00019761001 | |
| 54200 chr11 manual_curation CDS 2309155 2309365 . + 0 Parent=GSCOCT00019761001 | |
| 54201 chr11 manual_curation CDS 2308935 2309056 . + 1 Parent=GSCOCT00019761001 | |
| 54202 chr11 manual_curation CDS 2308706 2308830 . + 2 Parent=GSCOCT00019761001 | |
| 54203 chr11 manual_curation CDS 2308425 2308473 . + 1 Parent=GSCOCT00019761001 | |
| 54204 chr11 manual_curation CDS 2307559 2308261 . + 0 Parent=GSCOCT00019761001 | |
| 54205 chr11 manual_curation gene 2388429 2389842 . + . ID=GSCOCG00019758001;Name=Cc11_g00760 | |
| 54206 chr11 manual_curation mRNA 2388429 2389842 . + . ID=GSCOCT00019758001;Parent=GSCOCG00019758001;Name=Cc11_g00760 | |
| 54207 chr11 manual_curation polypeptide 2388429 2389842 . + . ID=GSCOCP00019758001;Dbxref=InterPro:IPR002902,PFAM:PF01657,SwissProt:O65468,SwissProt:Q8GYA4,SwissProt:Q9M0X5,TAIR:AT4G05200.1,TAIR:AT4G23160.1,TAIR:AT4G23180.1,TrEMBL:B9RXT5,TrEMBL:B9RXT6,TrEMBL:F6HJ09;Derives_from=GSCOCT00019758001;Name=Cc11_g00760;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Cysteine-rich receptor-like protein kinase 25,CC_functional_completeness:fragment,CC_gene:CRK25,CC_gene:CRK10,CC_gene:CRK8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019758001~ Putative Cysteine-rich receptor-like protein kinase 25~ CRK25~ fragment;original_location=complement(join(3546066..3546900%2C3545487..3545632));owner=coffea | |
| 54208 chr11 manual_curation exon 2389697 2389842 . + . Parent=GSCOCT00019758001 | |
| 54209 chr11 manual_curation exon 2388429 2389263 . + . Parent=GSCOCT00019758001 | |
| 54210 chr11 manual_curation CDS 2389697 2389842 . + 1 Parent=GSCOCT00019758001 | |
| 54211 chr11 manual_curation CDS 2388429 2389263 . + 0 Parent=GSCOCT00019758001 | |
| 54212 chr11 manual_curation gene 2390044 2391075 . + . ID=GSCOCG00019757001;Name=Cc11_g00770 | |
| 54213 chr11 manual_curation mRNA 2390044 2391075 . + . ID=GSCOCT00019757001;Parent=GSCOCG00019757001;Name=Cc11_g00770 | |
| 54214 chr11 manual_curation polypeptide 2390044 2391075 . + . ID=GSCOCP00019757001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:O65468,SwissProt:Q8GYA4,SwissProt:Q9C5S9,TAIR:AT4G23140.2,TAIR:AT4G23160.1,TAIR:AT4G23180.1,TrEMBL:A5BD87,TrEMBL:B9H1S4,TrEMBL:B9P5I8;Derives_from=GSCOCT00019757001;Name=Cc11_g00770;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Cysteine-rich receptor-like protein kinase 10,CC_functional_completeness:fragment,CC_gene:CRK10,CC_gene:CRK6,CC_gene:CRK8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019757001~ Cysteine-rich receptor-like protein kinase 10~ CRK10~ fragment;original_location=complement(join(3545029..3545285%2C3544701..3544851%2C3544254..3544589));owner=coffea | |
| 54215 chr11 manual_curation exon 2390740 2391075 . + . Parent=GSCOCT00019757001 | |
| 54216 chr11 manual_curation exon 2390478 2390628 . + . Parent=GSCOCT00019757001 | |
| 54217 chr11 manual_curation exon 2390044 2390300 . + . Parent=GSCOCT00019757001 | |
| 54218 chr11 manual_curation CDS 2390740 2391075 . + 0 Parent=GSCOCT00019757001 | |
| 54219 chr11 manual_curation CDS 2390478 2390628 . + 2 Parent=GSCOCT00019757001 | |
| 54220 chr11 manual_curation CDS 2390044 2390300 . + 0 Parent=GSCOCT00019757001 | |
| 54221 chr11 manual_curation gene 2407450 2410533 . + . ID=GSCOCG00019756001;Name=Cc11_g00780 | |
| 54222 chr11 manual_curation mRNA 2407450 2410533 . + . ID=GSCOCT00019756001;Parent=GSCOCG00019756001;Name=Cc11_g00780 | |
| 54223 chr11 manual_curation polypeptide 2407450 2410533 . + . ID=GSCOCP00019756001;Dbxref=InterPro:IPR000374,PFAM:PF01148,SwissProt:Q2N2K0,SwissProt:Q5N9J9,SwissProt:Q67ZM7,TAIR:AT5G04490.1,TAIR:AT5G58560.1,TrEMBL:B9GGQ8,TrEMBL:B9RSC8,TrEMBL:F1BPW2;Derives_from=GSCOCT00019756001;Name=Cc11_g00780;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Probable phytol kinase 2%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:At5g58560,CC_gene:Os01g0832000;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019756001~ Probable phytol kinase 2%2C chloroplastic~ At5g58560~ fragment;original_location=complement(join(3527842..3527879%2C3527598..3527732%2C3525145..3525260%2C3524796..3524935));owner=coffea | |
| 54224 chr11 manual_curation exon 2410394 2410533 . + . Parent=GSCOCT00019756001 | |
| 54225 chr11 manual_curation exon 2410069 2410184 . + . Parent=GSCOCT00019756001 | |
| 54226 chr11 manual_curation exon 2407597 2407731 . + . Parent=GSCOCT00019756001 | |
| 54227 chr11 manual_curation exon 2407450 2407487 . + . Parent=GSCOCT00019756001 | |
| 54228 chr11 manual_curation CDS 2410394 2410533 . + 1 Parent=GSCOCT00019756001 | |
| 54229 chr11 manual_curation CDS 2410069 2410184 . + 2 Parent=GSCOCT00019756001 | |
| 54230 chr11 manual_curation CDS 2407597 2407731 . + 2 Parent=GSCOCT00019756001 | |
| 54231 chr11 manual_curation CDS 2407450 2407487 . + 0 Parent=GSCOCT00019756001 | |
| 54232 chr11 manual_curation gene 2448407 2452158 . + . ID=GSCOCG00019754001;Name=Cc11_g00790 | |
| 54233 chr11 manual_curation mRNA 2448407 2452158 . + . ID=GSCOCT00019754001;Parent=GSCOCG00019754001;Name=Cc11_g00790 | |
| 54234 chr11 manual_curation polypeptide 2448407 2452158 . + . ID=GSCOCP00019754001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SMART:SM00369,SwissProt:Q9C9H7,SwissProt:Q9LVP0,SwissProt:Q9SHI2,TAIR:AT1G71390.1,TAIR:AT2G34930.1,TAIR:AT3G05650.1,TrEMBL:A5BWT1,TrEMBL:F6I5J4,TrEMBL:I1LAM4;Derives_from=GSCOCT00019754001;Name=Cc11_g00790;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230,CC_functional_completeness:fragment,CC_gene:At1g17230,CC_gene:At5g63930,CC_gene:RLP12;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019754001~ Putative Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230~ At1g17230~ fragment;original_location=complement(join(3486231..3486922%2C3485776..3486140%2C3485190..3485514%2C3484157..3485118%2C3483171..3483316));owner=coffea | |
| 54235 chr11 manual_curation exon 2452013 2452158 . + . Parent=GSCOCT00019754001 | |
| 54236 chr11 manual_curation exon 2450211 2451172 . + . Parent=GSCOCT00019754001 | |
| 54237 chr11 manual_curation exon 2449815 2450139 . + . Parent=GSCOCT00019754001 | |
| 54238 chr11 manual_curation exon 2449189 2449553 . + . Parent=GSCOCT00019754001 | |
| 54239 chr11 manual_curation exon 2448407 2449098 . + . Parent=GSCOCT00019754001 | |
| 54240 chr11 manual_curation CDS 2452013 2452158 . + 1 Parent=GSCOCT00019754001 | |
| 54241 chr11 manual_curation CDS 2450211 2451172 . + 2 Parent=GSCOCT00019754001 | |
| 54242 chr11 manual_curation CDS 2449815 2450139 . + 1 Parent=GSCOCT00019754001 | |
| 54243 chr11 manual_curation CDS 2449189 2449553 . + 2 Parent=GSCOCT00019754001 | |
| 54244 chr11 manual_curation CDS 2448407 2449098 . + 0 Parent=GSCOCT00019754001 | |
| 54245 chr11 manual_curation gene 2673084 2675964 . + . ID=GSCOCG00019749001;Name=Cc11_g00800 | |
| 54246 chr11 manual_curation mRNA 2673084 2675964 . + . ID=GSCOCT00019749001;Parent=GSCOCG00019749001;Name=Cc11_g00800 | |
| 54247 chr11 manual_curation polypeptide 2673084 2675964 . + . ID=GSCOCP00019749001;Dbxref=InterPro:IPR001841,PROFILE:PS50089,SwissProt:P62878,SwissProt:Q8QG64,SwissProt:Q940X7,TAIR:AT3G05870.1,TAIR:AT3G42830.1,TAIR:AT5G20570.2,TrEMBL:C6T2R2,TrEMBL:I1KFB5,TrEMBL:Q2PYP4;Derives_from=GSCOCT00019749001;Name=Cc11_g00800;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:RING-box protein 1a,CC_functional_completeness:complete,CC_gene:RBX1A,CC_gene:rbx1,CC_gene:Rbx1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019749001~ RING-box protein 1a~ RBX1A~ complete;original_location=complement(join(3261929..3262245%2C3259365..3259458));owner=coffea | |
| 54248 chr11 manual_curation exon 2675871 2675964 . + . Parent=GSCOCT00019749001 | |
| 54249 chr11 manual_curation exon 2673084 2673400 . + . Parent=GSCOCT00019749001 | |
| 54250 chr11 manual_curation CDS 2675871 2675964 . + 2 Parent=GSCOCT00019749001 | |
| 54251 chr11 manual_curation CDS 2673084 2673400 . + 0 Parent=GSCOCT00019749001 | |
| 54252 chr11 manual_curation gene 2694937 2698668 . + . ID=GSCOCG00019747001;Name=Cc11_g00810 | |
| 54253 chr11 manual_curation mRNA 2694937 2698668 . + . ID=GSCOCT00019747001;Parent=GSCOCG00019747001;Name=Cc11_g00810 | |
| 54254 chr11 manual_curation polypeptide 2694937 2698391 . + . ID=GSCOCP00019747001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR002902,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF01657,PROFILE:PS50011,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:O65468,SwissProt:Q8GYA4,SwissProt:Q9M0X5,TAIR:AT4G05200.1,TAIR:AT4G23160.1,TAIR:AT4G23180.1,TrEMBL:B9HZN4,TrEMBL:B9RXT6,TrEMBL:F6HJ09;Derives_from=GSCOCT00019747001;Name=Cc11_g00810;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Cysteine-rich receptor-like protein kinase 10,CC_functional_completeness:complete,CC_gene:CRK10,CC_gene:CRK25,CC_gene:CRK8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019747001~ Cysteine-rich receptor-like protein kinase 10~ CRK10~ complete;original_location=complement(join(3239912..3240392%2C3238605..3238739%2C3238379..3238500%2C3238070..3238280%2C3237712..3237949%2C3237387..3237534%2C3236938..3237273));owner=coffea | |
| 54255 chr11 manual_curation exon 2698056 2698668 . + . Parent=GSCOCT00019747001 | |
| 54256 chr11 manual_curation exon 2697795 2697942 . + . Parent=GSCOCT00019747001 | |
| 54257 chr11 manual_curation exon 2697380 2697617 . + . Parent=GSCOCT00019747001 | |
| 54258 chr11 manual_curation exon 2697049 2697259 . + . Parent=GSCOCT00019747001 | |
| 54259 chr11 manual_curation exon 2696829 2696950 . + . Parent=GSCOCT00019747001 | |
| 54260 chr11 manual_curation exon 2696590 2696724 . + . Parent=GSCOCT00019747001 | |
| 54261 chr11 manual_curation exon 2694937 2695417 . + . Parent=GSCOCT00019747001 | |
| 54262 chr11 manual_curation CDS 2698056 2698391 . + 0 Parent=GSCOCT00019747001 | |
| 54263 chr11 manual_curation CDS 2697795 2697942 . + 2 Parent=GSCOCT00019747001 | |
| 54264 chr11 manual_curation CDS 2697380 2697617 . + 1 Parent=GSCOCT00019747001 | |
| 54265 chr11 manual_curation CDS 2697049 2697259 . + 0 Parent=GSCOCT00019747001 | |
| 54266 chr11 manual_curation CDS 2696829 2696950 . + 1 Parent=GSCOCT00019747001 | |
| 54267 chr11 manual_curation CDS 2696590 2696724 . + 1 Parent=GSCOCT00019747001 | |
| 54268 chr11 manual_curation CDS 2694937 2695417 . + 0 Parent=GSCOCT00019747001 | |
| 54269 chr11 manual_curation gene 2785484 2785723 . + . ID=GSCOCG00019694001;Name=Cc11_g00820 | |
| 54270 chr11 manual_curation mRNA 2785484 2785723 . + . ID=GSCOCT00019694001;Parent=GSCOCG00019694001;Name=Cc11_g00820 | |
| 54271 chr11 manual_curation polypeptide 2785484 2785723 . + . ID=GSCOCP00019694001;Dbxref=InterPro:IPR002136,SUPERFAMILY:SSF52166,SwissProt:P49691,SwissProt:Q9SF40,SwissProt:Q9XF97,TAIR:AT3G09630.1,TAIR:AT5G02870.1,TrEMBL:A9PG15,TrEMBL:B9P578,TrEMBL:F6GUN5;Derives_from=GSCOCT00019694001;Name=Cc11_g00820;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:60S ribosomal protein L4-1,CC_functional_completeness:fragment,CC_gene:RPL4A,CC_gene:RPL4D,CC_gene:RPL4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019694001~ 60S ribosomal protein L4-1~ RPL4A~ fragment;original_location=complement(3149606..3149845);owner=coffea | |
| 54272 chr11 manual_curation exon 2785484 2785723 . + . Parent=GSCOCT00019694001 | |
| 54273 chr11 manual_curation CDS 2785484 2785723 . + 0 Parent=GSCOCT00019694001 | |
| 54274 chr11 manual_curation gene 2786842 2788053 . + . ID=GSCOCG00019693001;Name=Cc11_g00830 | |
| 54275 chr11 manual_curation mRNA 2786842 2788053 . + . ID=GSCOCT00019693001;Parent=GSCOCG00019693001;Name=Cc11_g00830 | |
| 54276 chr11 manual_curation polypeptide 2786842 2788053 . + . ID=GSCOCP00019693001;Dbxref=InterPro:IPR019012,PFAM:PF09445,TAIR:AT1G30550.1,TAIR:AT1G45231.2,TrEMBL:D7KFL3,TrEMBL:F6HBY0,TrEMBL:Q9S9P4;Derives_from=GSCOCT00019693001;Name=Cc11_g00830;Ontology_term=CC_evidence_code:ISS,GO:0001510,GO:0008168,GO:0009452,CC_EC_number:missing_EC_number,PRODUCT:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019693001~ S-adenosyl-L-methionine-dependent methyltransferases superfamily protein~ unknown_gene~ fragment;original_location=complement(join(3148462..3148487%2C3147473..3147596%2C3147276..3147377));owner=coffea | |
| 54277 chr11 manual_curation exon 2787952 2788053 . + . Parent=GSCOCT00019693001 | |
| 54278 chr11 manual_curation exon 2787733 2787856 . + . Parent=GSCOCT00019693001 | |
| 54279 chr11 manual_curation exon 2786842 2786867 . + . Parent=GSCOCT00019693001 | |
| 54280 chr11 manual_curation CDS 2787952 2788053 . + 0 Parent=GSCOCT00019693001 | |
| 54281 chr11 manual_curation CDS 2787733 2787856 . + 2 Parent=GSCOCT00019693001 | |
| 54282 chr11 manual_curation CDS 2786842 2786867 . + 0 Parent=GSCOCT00019693001 | |
| 54283 chr11 manual_curation gene 2812923 2816214 . + . ID=GSCOCG00019689001;Name=Cc11_g00840 | |
| 54284 chr11 manual_curation mRNA 2812923 2816214 . + . ID=GSCOCT00019689001;Parent=GSCOCG00019689001;Name=Cc11_g00840 | |
| 54285 chr11 manual_curation polypeptide 2812923 2815933 . + . ID=GSCOCP00019689001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:C0LGP4,SwissProt:C0LGT6,SwissProt:Q9SD62,TAIR:AT3G47090.1,TAIR:AT3G47570.1,TAIR:AT3G47580.1,TrEMBL:F6HCE1,TrEMBL:G7KI96,TrEMBL:G7KI99;Derives_from=GSCOCT00019689001;Name=Cc11_g00840;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570,CC_functional_completeness:complete,CC_gene:At3g47570,CC_gene:At3g47110,CC_gene:EFR;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019689001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570~ At3g47570~ complete;original_location=complement(join(3122176..3122406%2C3121073..3121200%2C3120852..3121003%2C3120147..3120752%2C3119396..3119802));owner=coffea | |
| 54286 chr11 manual_curation exon 2815527 2816214 . + . Parent=GSCOCT00019689001 | |
| 54287 chr11 manual_curation exon 2814577 2815182 . + . Parent=GSCOCT00019689001 | |
| 54288 chr11 manual_curation exon 2814326 2814477 . + . Parent=GSCOCT00019689001 | |
| 54289 chr11 manual_curation exon 2814129 2814256 . + . Parent=GSCOCT00019689001 | |
| 54290 chr11 manual_curation exon 2812923 2813153 . + . Parent=GSCOCT00019689001 | |
| 54291 chr11 manual_curation CDS 2815527 2815933 . + 1 Parent=GSCOCT00019689001 | |
| 54292 chr11 manual_curation CDS 2814577 2815182 . + 1 Parent=GSCOCT00019689001 | |
| 54293 chr11 manual_curation CDS 2814326 2814477 . + 2 Parent=GSCOCT00019689001 | |
| 54294 chr11 manual_curation CDS 2814129 2814256 . + 0 Parent=GSCOCT00019689001 | |
| 54295 chr11 manual_curation CDS 2812923 2813153 . + 0 Parent=GSCOCT00019689001 | |
| 54296 chr11 manual_curation gene 2817325 2819715 . + . ID=GSCOCG00019688001;Name=Cc11_g00850 | |
| 54297 chr11 manual_curation mRNA 2817325 2819715 . + . ID=GSCOCT00019688001;Parent=GSCOCG00019688001;Name=Cc11_g00850 | |
| 54298 chr11 manual_curation polypeptide 2817471 2819715 . + . ID=GSCOCP00019688001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR002902,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF01657,PROFILE:PS50011,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:O65468,SwissProt:Q8GYA4,SwissProt:Q9M0X5,TAIR:AT4G05200.1,TAIR:AT4G23160.1,TAIR:AT4G23180.1,TrEMBL:B9RXT5,TrEMBL:B9RXT6,TrEMBL:F6HJ09;Derives_from=GSCOCT00019688001;Name=Cc11_g00850;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Cysteine-rich receptor-like protein kinase 25,CC_functional_completeness:fragment,CC_gene:CRK25,CC_gene:CRK10,CC_gene:CRK8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019688001~ Cysteine-rich receptor-like protein kinase 25~ CRK25~ fragment;original_location=complement(join(3117078..3117858%2C3116507..3116641%2C3116281..3116402%2C3115972..3116182%2C3115614..3115852));owner=coffea | |
| 54299 chr11 manual_curation exon 2819477 2819715 . + . Parent=GSCOCT00019688001 | |
| 54300 chr11 manual_curation exon 2819147 2819357 . + . Parent=GSCOCT00019688001 | |
| 54301 chr11 manual_curation exon 2818927 2819048 . + . Parent=GSCOCT00019688001 | |
| 54302 chr11 manual_curation exon 2818688 2818822 . + . Parent=GSCOCT00019688001 | |
| 54303 chr11 manual_curation exon 2817325 2818251 . + . Parent=GSCOCT00019688001 | |
| 54304 chr11 manual_curation CDS 2819477 2819715 . + 1 Parent=GSCOCT00019688001 | |
| 54305 chr11 manual_curation CDS 2819147 2819357 . + 0 Parent=GSCOCT00019688001 | |
| 54306 chr11 manual_curation CDS 2818927 2819048 . + 1 Parent=GSCOCT00019688001 | |
| 54307 chr11 manual_curation CDS 2818688 2818822 . + 1 Parent=GSCOCT00019688001 | |
| 54308 chr11 manual_curation CDS 2817471 2818251 . + 0 Parent=GSCOCT00019688001 | |
| 54309 chr11 manual_curation gene 2820064 2824243 . - . ID=GSCOCG00019687001;Name=Cc11_g00860 | |
| 54310 chr11 manual_curation mRNA 2820064 2824243 . - . ID=GSCOCT00019687001;Parent=GSCOCG00019687001;Name=Cc11_g00860 | |
| 54311 chr11 manual_curation polypeptide 2821606 2823488 . - . ID=GSCOCP00019687001;Dbxref=InterPro:IPR008551,PANTHER:PTHR17985,PFAM:PF05742,SwissProt:P54797,SwissProt:Q29RZ5,SwissProt:Q6ICL3,TAIR:AT1G20730.1,TAIR:AT1G20740.1,TAIR:AT4G38260.1,TrEMBL:B9H5I7,TrEMBL:B9MZ01,TrEMBL:D7U4R9;Derives_from=GSCOCT00019687001;Name=Cc11_g00860;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized protein C22orf25 homolog,CC_functional_completeness:fragment,CC_gene:T10,CC_gene:C22orf25;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019687001~ Putative Uncharacterized protein C22orf25 homolog~ T10~ fragment;original_location=join(3111841..3111942%2C3112016..3112120%2C3112381..3112594%2C3113204..3113394%2C3113562..3113723);owner=coffea | |
| 54312 chr11 manual_curation exon 2820064 2820413 . - . Parent=GSCOCT00019687001 | |
| 54313 chr11 manual_curation exon 2823387 2824243 . - . Parent=GSCOCT00019687001 | |
| 54314 chr11 manual_curation exon 2823209 2823313 . - . Parent=GSCOCT00019687001 | |
| 54315 chr11 manual_curation exon 2822735 2822948 . - . Parent=GSCOCT00019687001 | |
| 54316 chr11 manual_curation exon 2821935 2822125 . - . Parent=GSCOCT00019687001 | |
| 54317 chr11 manual_curation exon 2821577 2821767 . - . Parent=GSCOCT00019687001 | |
| 54318 chr11 manual_curation CDS 2823387 2823488 . - 0 Parent=GSCOCT00019687001 | |
| 54319 chr11 manual_curation CDS 2823209 2823313 . - 0 Parent=GSCOCT00019687001 | |
| 54320 chr11 manual_curation CDS 2822735 2822948 . - 0 Parent=GSCOCT00019687001 | |
| 54321 chr11 manual_curation CDS 2821935 2822125 . - 1 Parent=GSCOCT00019687001 | |
| 54322 chr11 manual_curation CDS 2821606 2821767 . - 0 Parent=GSCOCT00019687001 | |
| 54323 chr11 manual_curation gene 2837617 2841084 . - . ID=GSCOCG00019685001;Name=Cc11_g00870 | |
| 54324 chr11 manual_curation mRNA 2837617 2841084 . - . ID=GSCOCT00019685001;Parent=GSCOCG00019685001;Name=Cc11_g00870 | |
| 54325 chr11 manual_curation polypeptide 2839159 2841044 . - . ID=GSCOCP00019685001;Dbxref=InterPro:IPR008551,PANTHER:PTHR17985,PFAM:PF05742,SwissProt:P54797,SwissProt:Q29RZ5,SwissProt:Q6ICL3,TAIR:AT1G20730.1,TAIR:AT1G20740.1,TAIR:AT4G38260.1,TrEMBL:B9MZ01,TrEMBL:D7U4R9,TrEMBL:I1MAS0;Derives_from=GSCOCT00019685001;Name=Cc11_g00870;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Ser/Thr-rich protein T10 in DGCR region,CC_functional_completeness:complete,CC_gene:T10,CC_gene:C22orf25;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019685001~ Putative Ser/Thr-rich protein T10 in DGCR region~ T10~ complete;original_location=join(3094285..3094566%2C3094827..3095033%2C3095650..3095841%2C3096009..3096170);owner=coffea | |
| 54326 chr11 manual_curation exon 2840763 2841084 . - . Parent=GSCOCT00019685001 | |
| 54327 chr11 manual_curation exon 2840296 2840502 . - . Parent=GSCOCT00019685001 | |
| 54328 chr11 manual_curation exon 2839488 2839679 . - . Parent=GSCOCT00019685001 | |
| 54329 chr11 manual_curation exon 2837617 2839320 . - . Parent=GSCOCT00019685001 | |
| 54330 chr11 manual_curation CDS 2840763 2841044 . - 0 Parent=GSCOCT00019685001 | |
| 54331 chr11 manual_curation CDS 2840296 2840502 . - 0 Parent=GSCOCT00019685001 | |
| 54332 chr11 manual_curation CDS 2839488 2839679 . - 0 Parent=GSCOCT00019685001 | |
| 54333 chr11 manual_curation CDS 2839159 2839320 . - 0 Parent=GSCOCT00019685001 | |
| 54334 chr11 manual_curation gene 2861836 2864896 . + . ID=GSCOCG00019683001;Name=Cc11_g00880 | |
| 54335 chr11 manual_curation mRNA 2861836 2864896 . + . ID=GSCOCT00019683001;Parent=GSCOCG00019683001;Name=Cc11_g00880 | |
| 54336 chr11 manual_curation polypeptide 2861836 2864896 . + . ID=GSCOCP00019683001;Dbxref=InterPro:IPR001611,PFAM:PF00560,SwissProt:C0LGQ5,SwissProt:Q9C9H7,SwissProt:Q9FIZ3,TAIR:AT1G45616.1,TAIR:AT2G33050.1,TAIR:AT2G33060.1,TrEMBL:B9N959,TrEMBL:F6GVZ7,TrEMBL:G7KHD1;Derives_from=GSCOCT00019683001;Name=Cc11_g00880;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative Receptor-like protein 12,CC_functional_completeness:complete,CC_gene:RLP12,CC_gene:GSO1,CC_gene:GSO2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019683001~ Putative Receptor-like protein 12~ RLP12~ complete;original_location=complement(join(3073322..3073493%2C3072767..3072798%2C3072426..3072613%2C3071221..3072195%2C3070433..3070637));owner=coffea | |
| 54337 chr11 manual_curation exon 2864692 2864896 . + . Parent=GSCOCT00019683001 | |
| 54338 chr11 manual_curation exon 2863134 2864108 . + . Parent=GSCOCT00019683001 | |
| 54339 chr11 manual_curation exon 2862716 2862903 . + . Parent=GSCOCT00019683001 | |
| 54340 chr11 manual_curation exon 2862531 2862562 . + . Parent=GSCOCT00019683001 | |
| 54341 chr11 manual_curation exon 2861836 2862007 . + . Parent=GSCOCT00019683001 | |
| 54342 chr11 manual_curation CDS 2864692 2864896 . + 2 Parent=GSCOCT00019683001 | |
| 54343 chr11 manual_curation CDS 2863134 2864108 . + 2 Parent=GSCOCT00019683001 | |
| 54344 chr11 manual_curation CDS 2862716 2862903 . + 0 Parent=GSCOCT00019683001 | |
| 54345 chr11 manual_curation CDS 2862531 2862562 . + 1 Parent=GSCOCT00019683001 | |
| 54346 chr11 manual_curation CDS 2861836 2862007 . + 0 Parent=GSCOCT00019683001 | |
| 54347 chr11 manual_curation gene 2866016 2871374 . - . ID=GSCOCG00019682001;Name=Cc11_g00890 | |
| 54348 chr11 manual_curation mRNA 2866016 2871374 . - . ID=GSCOCT00019682001;Parent=GSCOCG00019682001;Name=Cc11_g00890 | |
| 54349 chr11 manual_curation polypeptide 2868372 2871374 . - . ID=GSCOCP00019682001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,InterPro:IPR021929,PFAM:PF00931,PFAM:PF12061,PRINTS:PR00364,SwissProt:Q6L3Z7,SwissProt:Q6L400,SwissProt:Q6L403,TAIR:AT3G46530.1,TAIR:AT3G46710.1,TAIR:AT3G46730.1,TrEMBL:Q6L432,TrEMBL:Q9LLD0,TrEMBL:Q9LLD4;Derives_from=GSCOCT00019682001;Name=Cc11_g00890;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1B-17,CC_functional_completeness:fragment,CC_gene:R1B-17,CC_gene:R1B-14,CC_gene:R1B-16;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019682001~ Putative late blight resistance protein homolog R1B-17~ R1B-17~ fragment;original_location=join(3063955..3065812%2C3065846..3066957);owner=coffea | |
| 54350 chr11 manual_curation exon 2867688 2867832 . - . Parent=GSCOCT00019682001 | |
| 54351 chr11 manual_curation exon 2866583 2866785 . - . Parent=GSCOCT00019682001 | |
| 54352 chr11 manual_curation exon 2866016 2866446 . - . Parent=GSCOCT00019682001 | |
| 54353 chr11 manual_curation exon 2869517 2871374 . - . Parent=GSCOCT00019682001 | |
| 54354 chr11 manual_curation exon 2868358 2869483 . - . Parent=GSCOCT00019682001 | |
| 54355 chr11 manual_curation CDS 2869517 2871374 . - 0 Parent=GSCOCT00019682001 | |
| 54356 chr11 manual_curation CDS 2868372 2869483 . - 1 Parent=GSCOCT00019682001 | |
| 54357 chr11 manual_curation gene 2876256 2880187 . - . ID=GSCOCG00019681001;Name=Cc11_g00900 | |
| 54358 chr11 manual_curation mRNA 2876256 2880187 . - . ID=GSCOCT00019681001;Parent=GSCOCG00019681001;Name=Cc11_g00900 | |
| 54359 chr11 manual_curation polypeptide 2876835 2879392 . - . ID=GSCOCP00019681001;Dbxref=InterPro:IPR004881,InterPro:IPR010914,PFAM:PF03193,PROFILE:PS50936,SwissProt:P52640,SwissProt:Q3MG79,SwissProt:Q8YUA3,TAIR:AT1G67440.1,TAIR:AT1G67460.1,TrEMBL:B9RMG0,TrEMBL:F6HG92,TrEMBL:I1MYG7;Derives_from=GSCOCT00019681001;Name=Cc11_g00900;Ontology_term=CC_evidence_code:ISS,GO:0003924,GO:0005525,CC_EC_number:missing_EC_number,PRODUCT:Putative ribosome biogenesis GTPase RsgA,CC_functional_completeness:fragment,CC_gene:rsgA,CC_gene:rsgA1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019681001~ Putative ribosome biogenesis GTPase RsgA~ rsgA~ fragment;original_location=join(3055937..3056050%2C3056791..3057012%2C3057127..3057321%2C3057471..3057664%2C3058302..3058494);owner=coffea | |
| 54360 chr11 manual_curation exon 2879279 2880187 . - . Parent=GSCOCT00019681001 | |
| 54361 chr11 manual_curation exon 2878317 2878538 . - . Parent=GSCOCT00019681001 | |
| 54362 chr11 manual_curation exon 2878008 2878202 . - . Parent=GSCOCT00019681001 | |
| 54363 chr11 manual_curation exon 2877665 2877858 . - . Parent=GSCOCT00019681001 | |
| 54364 chr11 manual_curation exon 2876256 2877027 . - . Parent=GSCOCT00019681001 | |
| 54365 chr11 manual_curation CDS 2879279 2879392 . - 0 Parent=GSCOCT00019681001 | |
| 54366 chr11 manual_curation CDS 2878317 2878538 . - 0 Parent=GSCOCT00019681001 | |
| 54367 chr11 manual_curation CDS 2878008 2878202 . - 0 Parent=GSCOCT00019681001 | |
| 54368 chr11 manual_curation CDS 2877665 2877858 . - 0 Parent=GSCOCT00019681001 | |
| 54369 chr11 manual_curation CDS 2876835 2877027 . - 2 Parent=GSCOCT00019681001 | |
| 54370 chr11 manual_curation gene 2880459 2882729 . + . ID=GSCOCG00019680001;Name=Cc11_g00910 | |
| 54371 chr11 manual_curation mRNA 2880459 2882729 . + . ID=GSCOCT00019680001;Parent=GSCOCG00019680001;Name=Cc11_g00910 | |
| 54372 chr11 manual_curation polypeptide 2880671 2881793 . + . ID=GSCOCP00019680001;Dbxref=InterPro:IPR009542,PANTHER:PTHR13202,PFAM:PF06645,SwissProt:Q5RF96,SwissProt:Q944J0,SwissProt:Q9Y6A9,TAIR:AT2G22425.1,TAIR:AT4G40042.1,TrEMBL:I1K3L2,TrEMBL:I1KS11,TrEMBL:I1MYG5;Derives_from=GSCOCT00019680001;Name=Cc11_g00910;Ontology_term=CC_evidence_code:ISS,GO:0005787,GO:0006465,GO:0008233,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Probable signal peptidase complex subunit 1,CC_functional_completeness:complete,CC_gene:At2g22425,CC_gene:SPCS1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019680001~ Probable signal peptidase complex subunit 1~ At2g22425~ complete;original_location=complement(join(3054650..3054658%2C3053536..3053814));owner=coffea | |
| 54373 chr11 manual_curation exon 2881515 2882729 . + . Parent=GSCOCT00019680001 | |
| 54374 chr11 manual_curation exon 2880459 2880679 . + . Parent=GSCOCT00019680001 | |
| 54375 chr11 manual_curation CDS 2881515 2881793 . + 0 Parent=GSCOCT00019680001 | |
| 54376 chr11 manual_curation CDS 2880671 2880679 . + 0 Parent=GSCOCT00019680001 | |
| 54377 chr11 manual_curation gene 2885009 2888693 . - . ID=GSCOCG00019678001;Name=Cc11_g00920 | |
| 54378 chr11 manual_curation mRNA 2885009 2888693 . - . ID=GSCOCT00019678001;Parent=GSCOCG00019678001;Name=Cc11_g00920 | |
| 54379 chr11 manual_curation polypeptide 2885009 2888693 . - . ID=GSCOCP00019678001;Dbxref=InterPro:IPR004457,PFAM:PF03367,SMART:SM00709,SwissProt:A9CB27,SwissProt:Q2TBX0,SwissProt:Q62384,TAIR:AT5G22480.1,TAIR:AT5G37340.2,TrEMBL:B9H3J7,TrEMBL:B9SR86,TrEMBL:I1KM99;Derives_from=GSCOCT00019678001;Name=Cc11_g00920;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:Znf259,CC_gene:ZNF259;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019678001~ Hypothetical protein~ Znf259~ missing_functional_completeness;original_location=join(3046636..3046712%2C3046768..3046849%2C3049876..3049920%2C3050189..3050320);owner=coffea | |
| 54380 chr11 manual_curation exon 2888617 2888693 . - . Parent=GSCOCT00019678001 | |
| 54381 chr11 manual_curation exon 2888480 2888561 . - . Parent=GSCOCT00019678001 | |
| 54382 chr11 manual_curation exon 2885409 2885453 . - . Parent=GSCOCT00019678001 | |
| 54383 chr11 manual_curation exon 2885009 2885140 . - . Parent=GSCOCT00019678001 | |
| 54384 chr11 manual_curation CDS 2888617 2888693 . - 0 Parent=GSCOCT00019678001 | |
| 54385 chr11 manual_curation CDS 2888480 2888561 . - 2 Parent=GSCOCT00019678001 | |
| 54386 chr11 manual_curation CDS 2885409 2885453 . - 0 Parent=GSCOCT00019678001 | |
| 54387 chr11 manual_curation CDS 2885009 2885140 . - 0 Parent=GSCOCT00019678001 | |
| 54388 chr11 manual_curation gene 2896512 2903395 . + . ID=GSCOCG00019676001;Name=Cc11_g00930 | |
| 54389 chr11 manual_curation mRNA 2896512 2903395 . + . ID=GSCOCT00019676001;Parent=GSCOCG00019676001;Name=Cc11_g00930 | |
| 54390 chr11 manual_curation polypeptide 2896512 2903395 . + . ID=GSCOCP00019676001;Dbxref=InterPro:IPR001179,PANTHER:PTHR10516,PFAM:PF00254,PROFILE:PS50059,SwissProt:O81864,TAIR:AT4G19830.1,TrEMBL:D7MG82,TrEMBL:D7T9L1,TrEMBL:Q1EPD1;Derives_from=GSCOCT00019676001;Name=Cc11_g00930;Ontology_term=CC_evidence_code:ISS,GO:0006457,CC_EC_number:missing_EC_number,PRODUCT:Peptidyl-prolyl cis-trans isomerase,CC_functional_completeness:complete,CC_gene:FKBP17-1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019676001~ Peptidyl-prolyl cis-trans isomerase~ FKBP17-1~ complete;original_location=complement(join(3038500..3038817%2C3037814..3037835%2C3036353..3036474%2C3035234..3035350%2C3031934..3032056));owner=coffea | |
| 54391 chr11 manual_curation exon 2903273 2903395 . + . Parent=GSCOCT00019676001 | |
| 54392 chr11 manual_curation exon 2899979 2900095 . + . Parent=GSCOCT00019676001 | |
| 54393 chr11 manual_curation exon 2898855 2898976 . + . Parent=GSCOCT00019676001 | |
| 54394 chr11 manual_curation exon 2897494 2897515 . + . Parent=GSCOCT00019676001 | |
| 54395 chr11 manual_curation exon 2896512 2896829 . + . Parent=GSCOCT00019676001 | |
| 54396 chr11 manual_curation CDS 2903273 2903395 . + 0 Parent=GSCOCT00019676001 | |
| 54397 chr11 manual_curation CDS 2899979 2900095 . + 0 Parent=GSCOCT00019676001 | |
| 54398 chr11 manual_curation CDS 2898855 2898976 . + 1 Parent=GSCOCT00019676001 | |
| 54399 chr11 manual_curation CDS 2897494 2897515 . + 0 Parent=GSCOCT00019676001 | |
| 54400 chr11 manual_curation CDS 2896512 2896829 . + 0 Parent=GSCOCT00019676001 | |
| 54401 chr11 manual_curation gene 2904956 2908249 . - . ID=GSCOCG00019675001;Name=Cc11_g00940 | |
| 54402 chr11 manual_curation mRNA 2904956 2908249 . - . ID=GSCOCT00019675001;Parent=GSCOCG00019675001;Name=Cc11_g00940 | |
| 54403 chr11 manual_curation polypeptide 2904956 2908249 . - . ID=GSCOCP00019675001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,InterPro:IPR021929,PFAM:PF00931,PFAM:PF12061,PRINTS:PR00364,SwissProt:Q60CZ8,SwissProt:Q6L438,SwissProt:Q8W1E0,TAIR:AT1G53350.1,TAIR:AT5G35450.1,TAIR:AT5G43470.1,TrEMBL:Q96485,TrEMBL:Q9LLD0,TrEMBL:Q9LLD4;Derives_from=GSCOCT00019675001;Name=Cc11_g00940;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1A-6,CC_functional_completeness:fragment,CC_gene:R1A-6,CC_gene:R1A-10,CC_gene:R1A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019675001~ Putative late blight resistance protein homolog R1A-6~ R1A-6~ fragment;original_location=join(3027080..3027922%2C3028007..3029099%2C3029271..3030373);owner=coffea | |
| 54404 chr11 manual_curation exon 2907407 2908249 . - . Parent=GSCOCT00019675001 | |
| 54405 chr11 manual_curation exon 2906230 2907322 . - . Parent=GSCOCT00019675001 | |
| 54406 chr11 manual_curation exon 2904956 2906058 . - . Parent=GSCOCT00019675001 | |
| 54407 chr11 manual_curation CDS 2907407 2908249 . - 0 Parent=GSCOCT00019675001 | |
| 54408 chr11 manual_curation CDS 2906230 2907322 . - 0 Parent=GSCOCT00019675001 | |
| 54409 chr11 manual_curation CDS 2904956 2906058 . - 1 Parent=GSCOCT00019675001 | |
| 54410 chr11 manual_curation gene 2929969 2930727 . - . ID=GSCOCG00019674001;Name=Cc11_g00950 | |
| 54411 chr11 manual_curation mRNA 2929969 2930727 . - . ID=GSCOCT00019674001;Parent=GSCOCG00019674001;Name=Cc11_g00950 | |
| 54412 chr11 manual_curation polypeptide 2929969 2930727 . - . ID=GSCOCP00019674001;Dbxref=InterPro:IPR002182,PFAM:PF00931,SwissProt:Q60CZ8,SwissProt:Q6L3Z4,SwissProt:Q6L438,TAIR:AT1G59620.1,TAIR:AT3G14460.1,TAIR:AT3G46530.1,TrEMBL:Q5YEK8,TrEMBL:Q5YEP9,TrEMBL:Q941Q6;Derives_from=GSCOCT00019674001;Name=Cc11_g00950;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1A-6,CC_functional_completeness:fragment,CC_gene:R1A-6,CC_gene:R1A-10,CC_gene:R1B-12;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019674001~ Putative late blight resistance protein homolog R1A-6~ R1A-6~ fragment;original_location=3004602..3005360;owner=coffea | |
| 54413 chr11 manual_curation exon 2929969 2930727 . - . Parent=GSCOCT00019674001 | |
| 54414 chr11 manual_curation CDS 2929969 2930727 . - 0 Parent=GSCOCT00019674001 | |
| 54415 chr11 manual_curation gene 2993784 2998701 . - . ID=GSCOCG00019673001;Name=Cc11_g00960 | |
| 54416 chr11 manual_curation mRNA 2993784 2998701 . - . ID=GSCOCT00019673001;Parent=GSCOCG00019673001;Name=Cc11_g00960 | |
| 54417 chr11 manual_curation polypeptide 2993784 2998701 . - . ID=GSCOCP00019673001;Dbxref=InterPro:IPR002182,InterPro:IPR021929,PFAM:PF00931,PFAM:PF12061,SwissProt:Q6L3Z7,SwissProt:Q6L400,SwissProt:Q6L403,TAIR:AT1G53350.1,TAIR:AT1G58390.1,TAIR:AT1G59620.1,TrEMBL:Q6L432,TrEMBL:Q9LLD0,TrEMBL:Q9LLD4;Derives_from=GSCOCT00019673001;Name=Cc11_g00960;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,CC_EC_number:missing_EC_number,PRODUCT:Putative Late blight resistance protein R1,CC_functional_completeness:complete,CC_gene:R1B-17,CC_gene:R1B-16,CC_gene:R1B-14;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019673001~ Putative Late blight resistance protein R1~ R1B-17~ complete;original_location=join(2936628..2939200%2C2939273..2939447%2C2939974..2940262%2C2940296..2941545);owner=coffea | |
| 54418 chr11 manual_curation exon 2996129 2998701 . - . Parent=GSCOCT00019673001 | |
| 54419 chr11 manual_curation exon 2995882 2996056 . - . Parent=GSCOCT00019673001 | |
| 54420 chr11 manual_curation exon 2995067 2995355 . - . Parent=GSCOCT00019673001 | |
| 54421 chr11 manual_curation exon 2993784 2995033 . - . Parent=GSCOCT00019673001 | |
| 54422 chr11 manual_curation CDS 2996129 2998701 . - 0 Parent=GSCOCT00019673001 | |
| 54423 chr11 manual_curation CDS 2995882 2996056 . - 2 Parent=GSCOCT00019673001 | |
| 54424 chr11 manual_curation CDS 2995067 2995355 . - 0 Parent=GSCOCT00019673001 | |
| 54425 chr11 manual_curation CDS 2993784 2995033 . - 1 Parent=GSCOCT00019673001 | |
| 54426 chr11 manual_curation gene 3041643 3043926 . - . ID=GSCOCG00019670001;Name=Cc11_g00970 | |
| 54427 chr11 manual_curation mRNA 3041643 3043926 . - . ID=GSCOCT00019670001;Parent=GSCOCG00019670001;Name=Cc11_g00970 | |
| 54428 chr11 manual_curation polypeptide 3041643 3043926 . - . ID=GSCOCP00019670001;Dbxref=GENE3D:G3DSA:1.50.10.50,InterPro:IPR001382,PANTHER:PTHR11742,PFAM:PF01532,PRINTS:PR00747,SUPERFAMILY:SSF48225,SwissProt:P45701,SwissProt:Q8H116,SwissProt:Q9C512,TAIR:AT1G30000.1,TAIR:AT1G51590.1,TAIR:AT3G21160.1,TrEMBL:D7SS40,TrEMBL:G5DWT1,TrEMBL:G5DWT2;Derives_from=GSCOCT00019670001;Name=Cc11_g00970;Ontology_term=CC_evidence_code:ISS,GO:0005509,GO:0016020,CC_EC_number:3.2.1.113,PRODUCT:Mannosyl-oligosaccharide 1%2C2-alpha-mannosidase MNS1,CC_functional_completeness:fragment,CC_gene:MNS1,CC_gene:MNS2,CC_gene:MAN1A1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019670001~ Mannosyl-oligosaccharide 1%2C2-alpha-mannosidase MNS1~ MNS1~ fragment;original_location=join(2891403..2891460%2C2891547..2891667%2C2891831..2891876%2C2891928..2892002%2C2892395..2892484%2C2892734..2892876%2C2893070..2893135%2C2893340..2893451%2C2893519..2893686);owner=coffea | |
| 54429 chr11 manual_curation exon 3043869 3043926 . - . Parent=GSCOCT00019670001 | |
| 54430 chr11 manual_curation exon 3043662 3043782 . - . Parent=GSCOCT00019670001 | |
| 54431 chr11 manual_curation exon 3043453 3043498 . - . Parent=GSCOCT00019670001 | |
| 54432 chr11 manual_curation exon 3043327 3043401 . - . Parent=GSCOCT00019670001 | |
| 54433 chr11 manual_curation exon 3042845 3042934 . - . Parent=GSCOCT00019670001 | |
| 54434 chr11 manual_curation exon 3042453 3042595 . - . Parent=GSCOCT00019670001 | |
| 54435 chr11 manual_curation exon 3042194 3042259 . - . Parent=GSCOCT00019670001 | |
| 54436 chr11 manual_curation exon 3041878 3041989 . - . Parent=GSCOCT00019670001 | |
| 54437 chr11 manual_curation exon 3041643 3041810 . - . Parent=GSCOCT00019670001 | |
| 54438 chr11 manual_curation CDS 3043869 3043926 . - 0 Parent=GSCOCT00019670001 | |
| 54439 chr11 manual_curation CDS 3043662 3043782 . - 1 Parent=GSCOCT00019670001 | |
| 54440 chr11 manual_curation CDS 3043453 3043498 . - 2 Parent=GSCOCT00019670001 | |
| 54441 chr11 manual_curation CDS 3043327 3043401 . - 0 Parent=GSCOCT00019670001 | |
| 54442 chr11 manual_curation CDS 3042845 3042934 . - 0 Parent=GSCOCT00019670001 | |
| 54443 chr11 manual_curation CDS 3042453 3042595 . - 0 Parent=GSCOCT00019670001 | |
| 54444 chr11 manual_curation CDS 3042194 3042259 . - 2 Parent=GSCOCT00019670001 | |
| 54445 chr11 manual_curation CDS 3041878 3041989 . - 2 Parent=GSCOCT00019670001 | |
| 54446 chr11 manual_curation CDS 3041643 3041810 . - 0 Parent=GSCOCT00019670001 | |
| 54447 chr11 manual_curation gene 3044166 3044840 . - . ID=GSCOCG00019669001;Name=Cc11_g00980 | |
| 54448 chr11 manual_curation mRNA 3044166 3044840 . - . ID=GSCOCT00019669001;Parent=GSCOCG00019669001;Name=Cc11_g00980 | |
| 54449 chr11 manual_curation polypeptide 3044166 3044840 . - . ID=GSCOCP00019669001;Dbxref=SwissProt:Q69SA9,SwissProt:Q9LJU2,SwissProt:Q9T042,TAIR:AT1G50950.1,TAIR:AT3G20560.1,TAIR:AT4G27080.2,TrEMBL:I1KEH2,TrEMBL:I1LSL9,TrEMBL:I1LSM0;Derives_from=GSCOCT00019669001;Name=Cc11_g00980;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:PDIL5-4,CC_gene:PDIL5-3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019669001~ Hypothetical protein~ PDIL5-4~ missing_functional_completeness;original_location=join(2890489..2890535%2C2890656..2890722%2C2890999..2891163);owner=coffea | |
| 54450 chr11 manual_curation exon 3044794 3044840 . - . Parent=GSCOCT00019669001 | |
| 54451 chr11 manual_curation exon 3044607 3044673 . - . Parent=GSCOCT00019669001 | |
| 54452 chr11 manual_curation exon 3044166 3044330 . - . Parent=GSCOCT00019669001 | |
| 54453 chr11 manual_curation CDS 3044794 3044840 . - 0 Parent=GSCOCT00019669001 | |
| 54454 chr11 manual_curation CDS 3044607 3044673 . - 2 Parent=GSCOCT00019669001 | |
| 54455 chr11 manual_curation CDS 3044166 3044330 . - 0 Parent=GSCOCT00019669001 | |
| 54456 chr11 manual_curation gene 3147627 3149291 . - . ID=GSCOCG00019668001;Name=Cc11_g00990 | |
| 54457 chr11 manual_curation mRNA 3147627 3149291 . - . ID=GSCOCT00019668001;Parent=GSCOCG00019668001;Name=Cc11_g00990 | |
| 54458 chr11 manual_curation polypeptide 3148694 3148885 . - . ID=GSCOCP00019668001;Derives_from=GSCOCT00019668001;Name=Cc11_g00990;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019668001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=2786444..2786635;owner=coffea | |
| 54459 chr11 manual_curation exon 3147627 3149291 . - . Parent=GSCOCT00019668001 | |
| 54460 chr11 manual_curation CDS 3148694 3148885 . - 0 Parent=GSCOCT00019668001 | |
| 54461 chr11 manual_curation gene 3256336 3258919 . + . ID=GSCOCG00019665001;Name=Cc11_g01000 | |
| 54462 chr11 manual_curation mRNA 3256336 3258919 . + . ID=GSCOCT00019665001;Parent=GSCOCG00019665001;Name=Cc11_g01000 | |
| 54463 chr11 manual_curation polypeptide 3257395 3258919 . + . ID=GSCOCP00019665001;Dbxref=InterPro:IPR020810,PFAM:PF00113,SwissProt:P42896,SwissProt:Q9LEI9,SwissProt:Q9LEJ0,TAIR:AT1G74030.1,TAIR:AT2G36530.1,TrEMBL:B9SRG1,TrEMBL:D7NHW9,TrEMBL:Q6WB92;Derives_from=GSCOCT00019665001;Name=Cc11_g01000;Ontology_term=CC_evidence_code:ISS,GO:0000015,GO:0000287,GO:0004634,GO:0006096,CC_EC_number:4.2.1.11,PRODUCT:Enolase,CC_functional_completeness:fragment,CC_gene:ENO2,CC_gene:ENO1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019665001~ Enolase~ ENO2~ fragment;original_location=complement(join(2677803..2677934%2C2677653..2677715%2C2676920..2676997%2C2676410..2676448));owner=coffea | |
| 54464 chr11 manual_curation exon 3256800 3256946 . + . Parent=GSCOCT00019665001 | |
| 54465 chr11 manual_curation exon 3256336 3256500 . + . Parent=GSCOCT00019665001 | |
| 54466 chr11 manual_curation exon 3258881 3258919 . + . Parent=GSCOCT00019665001 | |
| 54467 chr11 manual_curation exon 3258332 3258409 . + . Parent=GSCOCT00019665001 | |
| 54468 chr11 manual_curation exon 3257614 3257676 . + . Parent=GSCOCT00019665001 | |
| 54469 chr11 manual_curation exon 3257100 3257526 . + . Parent=GSCOCT00019665001 | |
| 54470 chr11 manual_curation CDS 3258881 3258919 . + 0 Parent=GSCOCT00019665001 | |
| 54471 chr11 manual_curation CDS 3258332 3258409 . + 0 Parent=GSCOCT00019665001 | |
| 54472 chr11 manual_curation CDS 3257614 3257676 . + 0 Parent=GSCOCT00019665001 | |
| 54473 chr11 manual_curation CDS 3257395 3257526 . + 0 Parent=GSCOCT00019665001 | |
| 54474 chr11 manual_curation gene 3569862 3571236 . - . ID=GSCOCG00019660001;Name=Cc11_g01010 | |
| 54475 chr11 manual_curation mRNA 3569862 3571236 . - . ID=GSCOCT00019660001;Parent=GSCOCG00019660001;Name=Cc11_g01010 | |
| 54476 chr11 manual_curation polypeptide 3570877 3571236 . - . ID=GSCOCP00019660001;Derives_from=GSCOCT00019660001;Name=Cc11_g01010;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019660001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=2364093..2364452;owner=coffea | |
| 54477 chr11 manual_curation exon 3569862 3571236 . - . Parent=GSCOCT00019660001 | |
| 54478 chr11 manual_curation CDS 3570877 3571236 . - 0 Parent=GSCOCT00019660001 | |
| 54479 chr11 manual_curation gene 3693979 3694733 . - . ID=GSCOCG00019656001;Name=Cc11_g01020 | |
| 54480 chr11 manual_curation mRNA 3693979 3694733 . - . ID=GSCOCT00019656001;Parent=GSCOCG00019656001;Name=Cc11_g01020 | |
| 54481 chr11 manual_curation polypeptide 3693979 3694733 . - . ID=GSCOCP00019656001;Dbxref=InterPro:IPR001023,InterPro:IPR013126,PANTHER:PTHR19375,PFAM:PF00012,SwissProt:F4HQD4,SwissProt:Q9S7C0,SwissProt:Q9SAB1,TAIR:AT1G11660.1,TAIR:AT1G79920.1,TAIR:AT1G79930.1,TrEMBL:B9GEL5,TrEMBL:I1M5L7,TrEMBL:I1MCN3;Derives_from=GSCOCT00019656001;Name=Cc11_g01020;Ontology_term=CC_evidence_code:ISS,GO:0005524,CC_EC_number:missing_EC_number,PRODUCT:Heat shock 70 kDa protein 15,CC_functional_completeness:fragment,CC_gene:HSP70-15,CC_gene:HSP70-14,CC_gene:HSP70-16;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019656001~ Heat shock 70 kDa protein 15~ HSP70-15~ fragment;original_location=join(2240596..2240667%2C2240760..2240885%2C2240971..2241124%2C2241238..2241350);owner=coffea | |
| 54482 chr11 manual_curation exon 3694662 3694733 . - . Parent=GSCOCT00019656001 | |
| 54483 chr11 manual_curation exon 3694444 3694569 . - . Parent=GSCOCT00019656001 | |
| 54484 chr11 manual_curation exon 3694205 3694358 . - . Parent=GSCOCT00019656001 | |
| 54485 chr11 manual_curation exon 3693979 3694091 . - . Parent=GSCOCT00019656001 | |
| 54486 chr11 manual_curation CDS 3694662 3694733 . - 0 Parent=GSCOCT00019656001 | |
| 54487 chr11 manual_curation CDS 3694444 3694569 . - 0 Parent=GSCOCT00019656001 | |
| 54488 chr11 manual_curation CDS 3694205 3694358 . - 0 Parent=GSCOCT00019656001 | |
| 54489 chr11 manual_curation CDS 3693979 3694091 . - 1 Parent=GSCOCT00019656001 | |
| 54490 chr11 manual_curation gene 3702149 3704863 . + . ID=GSCOCG00019655001;Name=Cc11_g01030 | |
| 54491 chr11 manual_curation mRNA 3702149 3704863 . + . ID=GSCOCT00019655001;Parent=GSCOCG00019655001;Name=Cc11_g01030 | |
| 54492 chr11 manual_curation polypeptide 3702149 3704863 . + . ID=GSCOCP00019655001;Dbxref=GENE3D:G3DSA:3.40.50.800,InterPro:IPR004154,PFAM:PF03129,SUPERFAMILY:SSF52954,SwissProt:A9W9Q2,SwissProt:B8G3V5,SwissProt:B9LC55,TAIR:AT3G62120.1,TAIR:AT5G10880.1,TAIR:AT5G52520.1,TrEMBL:A5BJK3,TrEMBL:B9RIU3,TrEMBL:E0CUX2;Derives_from=GSCOCT00019655001;Name=Cc11_g01030;Ontology_term=CC_evidence_code:ISS,GO:0004812,GO:0005524,GO:0006412,CC_EC_number:6.1.1.15,PRODUCT:Class II aaRS and biotin synthetases superfamily protein,CC_functional_completeness:fragment,CC_gene:proS;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019655001~ Class II aaRS and biotin synthetases superfamily protein~ proS~ fragment;original_location=complement(join(2233112..2233180%2C2232858..2233057%2C2232062..2232208%2C2230466..2230679));owner=coffea | |
| 54493 chr11 manual_curation exon 3704650 3704863 . + . Parent=GSCOCT00019655001 | |
| 54494 chr11 manual_curation exon 3703121 3703267 . + . Parent=GSCOCT00019655001 | |
| 54495 chr11 manual_curation exon 3702272 3702471 . + . Parent=GSCOCT00019655001 | |
| 54496 chr11 manual_curation exon 3702149 3702217 . + . Parent=GSCOCT00019655001 | |
| 54497 chr11 manual_curation CDS 3704650 3704863 . + 2 Parent=GSCOCT00019655001 | |
| 54498 chr11 manual_curation CDS 3703121 3703267 . + 2 Parent=GSCOCT00019655001 | |
| 54499 chr11 manual_curation CDS 3702272 3702471 . + 0 Parent=GSCOCT00019655001 | |
| 54500 chr11 manual_curation CDS 3702149 3702217 . + 0 Parent=GSCOCT00019655001 | |
| 54501 chr11 manual_curation gene 3722046 3729133 . - . ID=GSCOCG00019652001;Name=Cc11_g01040 | |
| 54502 chr11 manual_curation mRNA 3722046 3729133 . - . ID=GSCOCT00019652001;Parent=GSCOCG00019652001;Name=Cc11_g01040 | |
| 54503 chr11 manual_curation polypeptide 3722046 3727917 . - . ID=GSCOCP00019652001;Dbxref=SwissProt:Q1LXK4,SwissProt:Q6J5K9,SwissProt:Q8GYD9,TAIR:AT1G05460.1,TrEMBL:B9H5P8,TrEMBL:B9HGF2,TrEMBL:B9SYB1;Derives_from=GSCOCT00019652001;Name=Cc11_g01040;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:SDE3,CC_gene:armi,CC_gene:mov10b.1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019652001~ Hypothetical protein~ SDE3~ missing_functional_completeness;original_location=join(2207412..2207452%2C2208159..2209101%2C2211121..2211342%2C2212321..2213283);owner=coffea | |
| 54504 chr11 manual_curation exon 3727877 3729133 . - . Parent=GSCOCT00019652001 | |
| 54505 chr11 manual_curation exon 3726228 3727170 . - . Parent=GSCOCT00019652001 | |
| 54506 chr11 manual_curation exon 3723987 3724208 . - . Parent=GSCOCT00019652001 | |
| 54507 chr11 manual_curation exon 3722046 3723008 . - . Parent=GSCOCT00019652001 | |
| 54508 chr11 manual_curation CDS 3727877 3727917 . - 0 Parent=GSCOCT00019652001 | |
| 54509 chr11 manual_curation CDS 3726228 3727170 . - 2 Parent=GSCOCT00019652001 | |
| 54510 chr11 manual_curation CDS 3723987 3724208 . - 0 Parent=GSCOCT00019652001 | |
| 54511 chr11 manual_curation CDS 3722046 3723008 . - 0 Parent=GSCOCT00019652001 | |
| 54512 chr11 manual_curation gene 3736212 3744451 . - . ID=GSCOCG00019651001;Name=Cc11_g01050 | |
| 54513 chr11 manual_curation mRNA 3736212 3744451 . - . ID=GSCOCT00019651001;Parent=GSCOCG00019651001;Name=Cc11_g01050 | |
| 54514 chr11 manual_curation polypeptide 3736384 3744451 . - . ID=GSCOCP00019651001;Dbxref=SwissProt:Q1LXK4,SwissProt:Q5ZKD7,SwissProt:Q8GYD9,TAIR:AT1G05460.1,TrEMBL:B9H5P8,TrEMBL:B9HGF2,TrEMBL:B9SYB1;Derives_from=GSCOCT00019651001;Name=Cc11_g01050;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:SDE3,CC_gene:mov10b.1,CC_gene:MOV10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019651001~ Hypothetical protein~ SDE3~ missing_functional_completeness;original_location=join(2190878..2190953%2C2191163..2191172%2C2194294..2195200%2C2197079..2197300%2C2197986..2198945);owner=coffea | |
| 54515 chr11 manual_curation exon 3744376 3744451 . - . Parent=GSCOCT00019651001 | |
| 54516 chr11 manual_curation exon 3744157 3744166 . - . Parent=GSCOCT00019651001 | |
| 54517 chr11 manual_curation exon 3740129 3741035 . - . Parent=GSCOCT00019651001 | |
| 54518 chr11 manual_curation exon 3738029 3738250 . - . Parent=GSCOCT00019651001 | |
| 54519 chr11 manual_curation exon 3736212 3737343 . - . Parent=GSCOCT00019651001 | |
| 54520 chr11 manual_curation CDS 3744376 3744451 . - 0 Parent=GSCOCT00019651001 | |
| 54521 chr11 manual_curation CDS 3744157 3744166 . - 1 Parent=GSCOCT00019651001 | |
| 54522 chr11 manual_curation CDS 3740129 3741035 . - 2 Parent=GSCOCT00019651001 | |
| 54523 chr11 manual_curation CDS 3738029 3738250 . - 0 Parent=GSCOCT00019651001 | |
| 54524 chr11 manual_curation CDS 3736384 3737343 . - 0 Parent=GSCOCT00019651001 | |
| 54525 chr11 manual_curation gene 3796021 3797051 . + . ID=GSCOCG00019650001;Name=Cc11_g01060 | |
| 54526 chr11 manual_curation mRNA 3796021 3797051 . + . ID=GSCOCT00019650001;Parent=GSCOCG00019650001;Name=Cc11_g01060 | |
| 54527 chr11 manual_curation polypeptide 3796250 3796852 . + . ID=GSCOCP00019650001;Dbxref=InterPro:IPR000916,PFAM:PF00407,PRINTS:PR00634,SwissProt:O24248,SwissProt:O50001,SwissProt:Q40280,TrEMBL:A0AUB7,TrEMBL:F6LXS7,TrEMBL:Q4VPL0;Derives_from=GSCOCT00019650001;Name=Cc11_g01060;Ontology_term=CC_evidence_code:ISS,GO:0006952,GO:0009607,CC_EC_number:missing_EC_number,PRODUCT:Major allergen Pru ar 1,CC_functional_completeness:complete,CC_gene:PRUA1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019650001~ Major allergen Pru ar 1~ PRUA1~ complete;original_location=complement(join(2138899..2139079%2C2138477..2138796));owner=coffea | |
| 54528 chr11 manual_curation exon 3796533 3797051 . + . Parent=GSCOCT00019650001 | |
| 54529 chr11 manual_curation exon 3796021 3796430 . + . Parent=GSCOCT00019650001 | |
| 54530 chr11 manual_curation CDS 3796533 3796852 . + 1 Parent=GSCOCT00019650001 | |
| 54531 chr11 manual_curation CDS 3796250 3796430 . + 0 Parent=GSCOCT00019650001 | |
| 54532 chr11 manual_curation gene 3804471 3805130 . - . ID=GSCOCG00019647001;Name=Cc11_g01070 | |
| 54533 chr11 manual_curation mRNA 3804471 3805130 . - . ID=GSCOCT00019647001;Parent=GSCOCG00019647001;Name=Cc11_g01070 | |
| 54534 chr11 manual_curation polypeptide 3804471 3805067 . - . ID=GSCOCP00019647001;Dbxref=TAIR:AT4G24370.1,TrEMBL:B9RGH7,TrEMBL:D7M8U6,TrEMBL:Q9STV7;Derives_from=GSCOCT00019647001;Name=Cc11_g01070;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B Has 30201 Blast hits to 17322 proteins in 780 species,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019647001~ Putative unknown protein%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ unknown_gene~ complete;original_location=2130262..2130858;owner=coffea | |
| 54535 chr11 manual_curation exon 3804471 3805130 . - . Parent=GSCOCT00019647001 | |
| 54536 chr11 manual_curation CDS 3804471 3805067 . - 0 Parent=GSCOCT00019647001 | |
| 54537 chr11 manual_curation gene 3889701 3899226 . + . ID=GSCOCG00019643001;Name=Cc11_g01080 | |
| 54538 chr11 manual_curation mRNA 3889701 3899226 . + . ID=GSCOCT00019643001;Parent=GSCOCG00019643001;Name=Cc11_g01080 | |
| 54539 chr11 manual_curation polypeptide 3889784 3898876 . + . ID=GSCOCP00019643001;Dbxref=InterPro:IPR010456,PFAM:PF06325,SwissProt:A2Z8S0,SwissProt:Q08A71,SwissProt:Q75G68,TAIR:AT2G19670.1,TAIR:AT3G20020.1,TAIR:AT4G29510.1,TrEMBL:B9RGH9,TrEMBL:D7LAV3,TrEMBL:I1NCV3;Derives_from=GSCOCT00019643001;Name=Cc11_g01080;Ontology_term=CC_evidence_code:ISS,GO:0005737,GO:0006479,GO:0008276,CC_EC_number:2.1.1.125,PRODUCT:Probable protein arginine N-methyltransferase 6,CC_functional_completeness:complete,CC_gene:PRMT6,CC_gene:PRMT6.2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019643001~ Probable protein arginine N-methyltransferase 6~ PRMT6~ complete;original_location=complement(join(2045243..2045545%2C2044455..2044520%2C2044076..2044144%2C2043588..2043623%2C2043242..2043307%2C2040226..2040294%2C2040042..2040119%2C2039490..2039568%2C2038913..2039007%2C2037644..2037728%2C2037325..2037527%2C2036611..2036729%2C2036453..2036495));owner=coffea | |
| 54540 chr11 manual_curation exon 3898834 3899226 . + . Parent=GSCOCT00019643001 | |
| 54541 chr11 manual_curation exon 3898600 3898718 . + . Parent=GSCOCT00019643001 | |
| 54542 chr11 manual_curation exon 3897802 3898004 . + . Parent=GSCOCT00019643001 | |
| 54543 chr11 manual_curation exon 3897601 3897685 . + . Parent=GSCOCT00019643001 | |
| 54544 chr11 manual_curation exon 3896322 3896416 . + . Parent=GSCOCT00019643001 | |
| 54545 chr11 manual_curation exon 3895761 3895839 . + . Parent=GSCOCT00019643001 | |
| 54546 chr11 manual_curation exon 3895210 3895287 . + . Parent=GSCOCT00019643001 | |
| 54547 chr11 manual_curation exon 3895035 3895103 . + . Parent=GSCOCT00019643001 | |
| 54548 chr11 manual_curation exon 3892022 3892087 . + . Parent=GSCOCT00019643001 | |
| 54549 chr11 manual_curation exon 3891706 3891741 . + . Parent=GSCOCT00019643001 | |
| 54550 chr11 manual_curation exon 3891185 3891253 . + . Parent=GSCOCT00019643001 | |
| 54551 chr11 manual_curation exon 3890809 3890874 . + . Parent=GSCOCT00019643001 | |
| 54552 chr11 manual_curation exon 3889701 3890086 . + . Parent=GSCOCT00019643001 | |
| 54553 chr11 manual_curation CDS 3898834 3898876 . + 2 Parent=GSCOCT00019643001 | |
| 54554 chr11 manual_curation CDS 3898600 3898718 . + 0 Parent=GSCOCT00019643001 | |
| 54555 chr11 manual_curation CDS 3897802 3898004 . + 1 Parent=GSCOCT00019643001 | |
| 54556 chr11 manual_curation CDS 3897601 3897685 . + 0 Parent=GSCOCT00019643001 | |
| 54557 chr11 manual_curation CDS 3896322 3896416 . + 1 Parent=GSCOCT00019643001 | |
| 54558 chr11 manual_curation CDS 3895761 3895839 . + 0 Parent=GSCOCT00019643001 | |
| 54559 chr11 manual_curation CDS 3895210 3895287 . + 0 Parent=GSCOCT00019643001 | |
| 54560 chr11 manual_curation CDS 3895035 3895103 . + 0 Parent=GSCOCT00019643001 | |
| 54561 chr11 manual_curation CDS 3892022 3892087 . + 0 Parent=GSCOCT00019643001 | |
| 54562 chr11 manual_curation CDS 3891706 3891741 . + 0 Parent=GSCOCT00019643001 | |
| 54563 chr11 manual_curation CDS 3891185 3891253 . + 0 Parent=GSCOCT00019643001 | |
| 54564 chr11 manual_curation CDS 3890809 3890874 . + 0 Parent=GSCOCT00019643001 | |
| 54565 chr11 manual_curation CDS 3889784 3890086 . + 0 Parent=GSCOCT00019643001 | |
| 54566 chr11 manual_curation gene 3913862 3915433 . + . ID=GSCOCG00019641001;Name=Cc11_g01090 | |
| 54567 chr11 manual_curation mRNA 3913862 3915433 . + . ID=GSCOCT00019641001;Parent=GSCOCG00019641001;Name=Cc11_g01090 | |
| 54568 chr11 manual_curation polypeptide 3913862 3915433 . + . ID=GSCOCP00019641001;Dbxref=GENE3D:G3DSA:2.40.70.10,InterPro:IPR001461,InterPro:IPR009007,InterPro:IPR021109,PANTHER:PTHR13683,PFAM:PF00026,SUPERFAMILY:SSF50630,SwissProt:Q766C2,SwissProt:Q9LHE3,SwissProt:Q9LS40,TAIR:AT1G25510.1,TAIR:AT3G18490.1,TAIR:AT3G20015.1,TrEMBL:B9RGI0,TrEMBL:F6HVZ3,TrEMBL:I1NF34;Derives_from=GSCOCT00019641001;Name=Cc11_g01090;Ontology_term=CC_evidence_code:ISS,GO:0004190,GO:0006508,CC_EC_number:missing_EC_number,PRODUCT:Protein ASPARTIC PROTEASE IN GUARD CELL 2,CC_functional_completeness:complete,CC_gene:ASPG2,CC_gene:ASPG1,CC_gene:nep2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019641001~ Protein ASPARTIC PROTEASE IN GUARD CELL 2~ ASPG2~ complete;original_location=complement(2019896..2021467);owner=coffea | |
| 54569 chr11 manual_curation exon 3913862 3915433 . + . Parent=GSCOCT00019641001 | |
| 54570 chr11 manual_curation CDS 3913862 3915433 . + 0 Parent=GSCOCT00019641001 | |
| 54571 chr11 manual_curation gene 3918565 3930165 . - . ID=GSCOCG00019639001;Name=Cc11_g01100 | |
| 54572 chr11 manual_curation mRNA 3918565 3930165 . - . ID=GSCOCT00019639001;Parent=GSCOCG00019639001;Name=Cc11_g01100 | |
| 54573 chr11 manual_curation polypeptide 3918565 3930165 . - . ID=GSCOCP00019639001;Dbxref=InterPro:IPR000330,InterPro:IPR001650,InterPro:IPR001841,InterPro:IPR014001,InterPro:IPR014021,InterPro:IPR017907,PFAM:PF00176,PFAM:PF00271,PROFILE:PS50089,PROFILE:PS51192,PROFILE:PS51194,PROSITE:PS00518,SMART:SM00487,SMART:SM00490,SwissProt:O60177,SwissProt:Q9FIY7,SwissProt:Q9FNI6,TAIR:AT1G50410.1,TAIR:AT1G61140.1,TAIR:AT3G20010.1,TrEMBL:B9HG87,TrEMBL:B9RGI1,TrEMBL:F6HVZ2;Derives_from=GSCOCT00019639001;Name=Cc11_g01100;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0003677,GO:0004386,GO:0005515,GO:0005524,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2,CC_functional_completeness:fragment,CC_gene:SPBC23E6.02,CC_gene:At5g22750,CC_gene:At5g43530;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019639001~ Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2~ SPBC23E6.02~ fragment;original_location=join(2005164..2005253%2C2005391..2005462%2C2005544..2005621%2C2005716..2006607%2C2010903..2011033%2C2012059..2012280%2C2013258..2013791%2C2014555..2014764%2C2016621..2016764);owner=coffea | |
| 54574 chr11 manual_curation exon 3930076 3930165 . - . Parent=GSCOCT00019639001 | |
| 54575 chr11 manual_curation exon 3929867 3929938 . - . Parent=GSCOCT00019639001 | |
| 54576 chr11 manual_curation exon 3929708 3929785 . - . Parent=GSCOCT00019639001 | |
| 54577 chr11 manual_curation exon 3928722 3929613 . - . Parent=GSCOCT00019639001 | |
| 54578 chr11 manual_curation exon 3924296 3924426 . - . Parent=GSCOCT00019639001 | |
| 54579 chr11 manual_curation exon 3923049 3923270 . - . Parent=GSCOCT00019639001 | |
| 54580 chr11 manual_curation exon 3921538 3922071 . - . Parent=GSCOCT00019639001 | |
| 54581 chr11 manual_curation exon 3920565 3920774 . - . Parent=GSCOCT00019639001 | |
| 54582 chr11 manual_curation exon 3918565 3918708 . - . Parent=GSCOCT00019639001 | |
| 54583 chr11 manual_curation CDS 3930076 3930165 . - 0 Parent=GSCOCT00019639001 | |
| 54584 chr11 manual_curation CDS 3929867 3929938 . - 0 Parent=GSCOCT00019639001 | |
| 54585 chr11 manual_curation CDS 3929708 3929785 . - 0 Parent=GSCOCT00019639001 | |
| 54586 chr11 manual_curation CDS 3928722 3929613 . - 0 Parent=GSCOCT00019639001 | |
| 54587 chr11 manual_curation CDS 3924296 3924426 . - 1 Parent=GSCOCT00019639001 | |
| 54588 chr11 manual_curation CDS 3923049 3923270 . - 0 Parent=GSCOCT00019639001 | |
| 54589 chr11 manual_curation CDS 3921538 3922071 . - 0 Parent=GSCOCT00019639001 | |
| 54590 chr11 manual_curation CDS 3920565 3920774 . - 0 Parent=GSCOCT00019639001 | |
| 54591 chr11 manual_curation CDS 3918565 3918708 . - 0 Parent=GSCOCT00019639001 | |
| 54592 chr11 manual_curation gene 3930801 3933063 . - . ID=GSCOCG00019638001;Name=Cc11_g01110 | |
| 54593 chr11 manual_curation mRNA 3930801 3933063 . - . ID=GSCOCT00019638001;Parent=GSCOCG00019638001;Name=Cc11_g01110 | |
| 54594 chr11 manual_curation polypeptide 3930801 3932191 . - . ID=GSCOCP00019638001;Dbxref=TrEMBL:B9HG87,TrEMBL:B9RGI1,TrEMBL:F6HVZ2;Derives_from=GSCOCT00019638001;Name=Cc11_g01110;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:DNA repair helicase rad5%2C16%2C putative,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019638001~ DNA repair helicase rad5%2C16%2C putative~ unknown_gene~ fragment;original_location=join(2003138..2003242%2C2003350..2003575%2C2003665..2003739%2C2003818..2004003%2C2004083..2004528);owner=coffea | |
| 54595 chr11 manual_curation exon 3932087 3933063 . - . Parent=GSCOCT00019638001 | |
| 54596 chr11 manual_curation exon 3931754 3931979 . - . Parent=GSCOCT00019638001 | |
| 54597 chr11 manual_curation exon 3931590 3931664 . - . Parent=GSCOCT00019638001 | |
| 54598 chr11 manual_curation exon 3931326 3931511 . - . Parent=GSCOCT00019638001 | |
| 54599 chr11 manual_curation exon 3930801 3931246 . - . Parent=GSCOCT00019638001 | |
| 54600 chr11 manual_curation CDS 3932087 3932191 . - 0 Parent=GSCOCT00019638001 | |
| 54601 chr11 manual_curation CDS 3931754 3931979 . - 0 Parent=GSCOCT00019638001 | |
| 54602 chr11 manual_curation CDS 3931590 3931664 . - 1 Parent=GSCOCT00019638001 | |
| 54603 chr11 manual_curation CDS 3931326 3931511 . - 1 Parent=GSCOCT00019638001 | |
| 54604 chr11 manual_curation CDS 3930801 3931246 . - 1 Parent=GSCOCT00019638001 | |
| 54605 chr11 manual_curation gene 4084844 4086282 . + . ID=GSCOCG00019633001;Name=Cc11_g01120 | |
| 54606 chr11 manual_curation mRNA 4084844 4086282 . + . ID=GSCOCT00019633001;Parent=GSCOCG00019633001;Name=Cc11_g01120 | |
| 54607 chr11 manual_curation polypeptide 4086067 4086282 . + . ID=GSCOCP00019633001;Derives_from=GSCOCT00019633001;Name=Cc11_g01120;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019633001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(1849047..1849262);owner=coffea | |
| 54608 chr11 manual_curation exon 4084844 4086282 . + . Parent=GSCOCT00019633001 | |
| 54609 chr11 manual_curation CDS 4086067 4086282 . + 0 Parent=GSCOCT00019633001 | |
| 54610 chr11 manual_curation gene 4126753 4127637 . + . ID=GSCOCG00019631001;Name=Cc11_g01130 | |
| 54611 chr11 manual_curation mRNA 4126753 4127637 . + . ID=GSCOCT00019631001;Parent=GSCOCG00019631001;Name=Cc11_g01130 | |
| 54612 chr11 manual_curation polypeptide 4126753 4127637 . + . ID=GSCOCP00019631001;Dbxref=TAIR:AT2G34260.1,TrEMBL:A9LK94,TrEMBL:B9H339,TrEMBL:F6HXL9;Derives_from=GSCOCT00019631001;Name=Cc11_g01130;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019631001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1808541..1808576%2C1808064..1808137%2C1807854..1807902%2C1807692..1807742));owner=coffea | |
| 54613 chr11 manual_curation exon 4127587 4127637 . + . Parent=GSCOCT00019631001 | |
| 54614 chr11 manual_curation exon 4127427 4127475 . + . Parent=GSCOCT00019631001 | |
| 54615 chr11 manual_curation exon 4127192 4127265 . + . Parent=GSCOCT00019631001 | |
| 54616 chr11 manual_curation exon 4126753 4126788 . + . Parent=GSCOCT00019631001 | |
| 54617 chr11 manual_curation CDS 4127587 4127637 . + 0 Parent=GSCOCT00019631001 | |
| 54618 chr11 manual_curation CDS 4127427 4127475 . + 2 Parent=GSCOCT00019631001 | |
| 54619 chr11 manual_curation CDS 4127192 4127265 . + 0 Parent=GSCOCT00019631001 | |
| 54620 chr11 manual_curation CDS 4126753 4126788 . + 0 Parent=GSCOCT00019631001 | |
| 54621 chr11 manual_curation gene 4127712 4128410 . + . ID=GSCOCG00019630001;Name=Cc11_g01140 | |
| 54622 chr11 manual_curation mRNA 4127712 4128410 . + . ID=GSCOCT00019630001;Parent=GSCOCG00019630001;Name=Cc11_g01140 | |
| 54623 chr11 manual_curation polypeptide 4127712 4128359 . + . ID=GSCOCP00019630001;Dbxref=InterPro:IPR019775,PROSITE:PS00678,TAIR:AT2G34260.1,TrEMBL:B7FJ48,TrEMBL:G7JRY6,TrEMBL:I1LAN2;Derives_from=GSCOCT00019630001;Name=Cc11_g01140;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019630001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=complement(join(1807612..1807617%2C1807532..1807571%2C1807225..1807280%2C1806970..1807038));owner=coffea | |
| 54624 chr11 manual_curation exon 4128291 4128410 . + . Parent=GSCOCT00019630001 | |
| 54625 chr11 manual_curation exon 4128049 4128104 . + . Parent=GSCOCT00019630001 | |
| 54626 chr11 manual_curation exon 4127758 4127797 . + . Parent=GSCOCT00019630001 | |
| 54627 chr11 manual_curation exon 4127712 4127717 . + . Parent=GSCOCT00019630001 | |
| 54628 chr11 manual_curation CDS 4128291 4128359 . + 0 Parent=GSCOCT00019630001 | |
| 54629 chr11 manual_curation CDS 4128049 4128104 . + 1 Parent=GSCOCT00019630001 | |
| 54630 chr11 manual_curation CDS 4127758 4127797 . + 0 Parent=GSCOCT00019630001 | |
| 54631 chr11 manual_curation CDS 4127712 4127717 . + 0 Parent=GSCOCT00019630001 | |
| 54632 chr11 manual_curation gene 4130652 4133294 . - . ID=GSCOCG00019628001;Name=Cc11_g01150 | |
| 54633 chr11 manual_curation mRNA 4130652 4133294 . - . ID=GSCOCT00019628001;Parent=GSCOCG00019628001;Name=Cc11_g01150 | |
| 54634 chr11 manual_curation polypeptide 4130652 4133294 . - . ID=GSCOCP00019628001;Dbxref=SwissProt:Q54JM5,TAIR:AT1G04810.1,TAIR:AT2G32730.1,TrEMBL:B1Q487,TrEMBL:Q6XBM5,TrEMBL:Q9MAT0;Derives_from=GSCOCT00019628001;Name=Cc11_g01150;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:26S proteasome regulatory complex%2C non-ATPase subcomplex%2C Rpn2/Psmd1 subunit,CC_functional_completeness:fragment,CC_gene:psmD1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019628001~ 26S proteasome regulatory complex%2C non-ATPase subcomplex%2C Rpn2/Psmd1 subunit~ psmD1~ fragment;original_location=join(1802035..1802074%2C1802588..1802796%2C1802865..1803020%2C1804099..1804128%2C1804278..1804368%2C1804448..1804677);owner=coffea | |
| 54635 chr11 manual_curation exon 4133255 4133294 . - . Parent=GSCOCT00019628001 | |
| 54636 chr11 manual_curation exon 4132533 4132741 . - . Parent=GSCOCT00019628001 | |
| 54637 chr11 manual_curation exon 4132309 4132464 . - . Parent=GSCOCT00019628001 | |
| 54638 chr11 manual_curation exon 4131201 4131230 . - . Parent=GSCOCT00019628001 | |
| 54639 chr11 manual_curation exon 4130961 4131051 . - . Parent=GSCOCT00019628001 | |
| 54640 chr11 manual_curation exon 4130652 4130881 . - . Parent=GSCOCT00019628001 | |
| 54641 chr11 manual_curation CDS 4133255 4133294 . - 0 Parent=GSCOCT00019628001 | |
| 54642 chr11 manual_curation CDS 4132533 4132741 . - 1 Parent=GSCOCT00019628001 | |
| 54643 chr11 manual_curation CDS 4132309 4132464 . - 0 Parent=GSCOCT00019628001 | |
| 54644 chr11 manual_curation CDS 4131201 4131230 . - 0 Parent=GSCOCT00019628001 | |
| 54645 chr11 manual_curation CDS 4130961 4131051 . - 0 Parent=GSCOCT00019628001 | |
| 54646 chr11 manual_curation CDS 4130652 4130881 . - 1 Parent=GSCOCT00019628001 | |
| 54647 chr11 manual_curation gene 4392187 4395093 . - . ID=GSCOCG00019618001;Name=Cc11_g01160 | |
| 54648 chr11 manual_curation mRNA 4392187 4395093 . - . ID=GSCOCT00019618001;Parent=GSCOCG00019618001;Name=Cc11_g01160 | |
| 54649 chr11 manual_curation polypeptide 4392187 4395093 . - . ID=GSCOCP00019618001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,InterPro:IPR021929,PFAM:PF00931,PFAM:PF12061,PRINTS:PR00364,SwissProt:Q6L3Z0,SwissProt:Q6L3Z7,SwissProt:Q6L403,TAIR:AT3G46530.1,TAIR:AT3G46710.1,TAIR:AT3G46730.1,TrEMBL:Q6L432,TrEMBL:Q6L4J5,TrEMBL:Q9LLD4;Derives_from=GSCOCT00019618001;Name=Cc11_g01160;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1B-13,CC_functional_completeness:fragment,CC_gene:R1B-13,CC_gene:R1B-17,CC_gene:R1B-14;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019618001~ Putative late blight resistance protein homolog R1B-13~ R1B-13~ fragment;original_location=join(1540236..1540418%2C1540534..1541638%2C1541996..1542798%2C1542858..1543142);owner=coffea | |
| 54650 chr11 manual_curation exon 4394911 4395093 . - . Parent=GSCOCT00019618001 | |
| 54651 chr11 manual_curation exon 4393691 4394795 . - . Parent=GSCOCT00019618001 | |
| 54652 chr11 manual_curation exon 4392531 4393333 . - . Parent=GSCOCT00019618001 | |
| 54653 chr11 manual_curation exon 4392187 4392471 . - . Parent=GSCOCT00019618001 | |
| 54654 chr11 manual_curation CDS 4394911 4395093 . - 0 Parent=GSCOCT00019618001 | |
| 54655 chr11 manual_curation CDS 4393691 4394795 . - 0 Parent=GSCOCT00019618001 | |
| 54656 chr11 manual_curation CDS 4392531 4393333 . - 1 Parent=GSCOCT00019618001 | |
| 54657 chr11 manual_curation CDS 4392187 4392471 . - 0 Parent=GSCOCT00019618001 | |
| 54658 chr11 manual_curation gene 4424479 4427227 . - . ID=GSCOCG00019617001;Name=Cc11_g01170 | |
| 54659 chr11 manual_curation mRNA 4424479 4427227 . - . ID=GSCOCT00019617001;Parent=GSCOCG00019617001;Name=Cc11_g01170 | |
| 54660 chr11 manual_curation polypeptide 4425707 4427227 . - . ID=GSCOCP00019617001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q9CA58,SwissProt:Q9FMF6,SwissProt:Q9SYK1,TAIR:AT1G05600.1,TAIR:AT1G74580.1,TAIR:AT5G64320.1,TIGRFAMs:TIGR00756,TrEMBL:B9GRQ9,TrEMBL:B9RNK1,TrEMBL:F6I2Y0;Derives_from=GSCOCT00019617001;Name=Cc11_g01170;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At1g05600,CC_functional_completeness:complete,CC_gene:At1g05600,CC_gene:At5g64320,CC_gene:At1g74580;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019617001~ Pentatricopeptide repeat-containing protein At1g05600~ At1g05600~ complete;original_location=1508102..1509622;owner=coffea | |
| 54661 chr11 manual_curation exon 4424479 4427227 . - . Parent=GSCOCT00019617001 | |
| 54662 chr11 manual_curation CDS 4425707 4427227 . - 0 Parent=GSCOCT00019617001 | |
| 54663 chr11 manual_curation gene 4516738 4518291 . + . ID=GSCOCG00019614001;Name=Cc11_g01180 | |
| 54664 chr11 manual_curation mRNA 4516738 4518291 . + . ID=GSCOCT00019614001;Parent=GSCOCG00019614001;Name=Cc11_g01180 | |
| 54665 chr11 manual_curation polypeptide 4516738 4518126 . + . ID=GSCOCP00019614001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,SwissProt:Q66PF2,SwissProt:Q940V3,SwissProt:Q9LTA3,TAIR:AT2G22590.1,TAIR:AT5G49690.1,TAIR:AT5G65550.1,TrEMBL:B9HSH7,TrEMBL:Q6VAA8,TrEMBL:Q8LKG3;Derives_from=GSCOCT00019614001;Name=Cc11_g01180;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:Putative UDP-rhamnose,CC_functional_completeness:complete,CC_gene:GT4,CC_gene:UGT91A1,CC_gene:UGT91C1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019614001~ Putative UDP-rhamnose:rhamnosyltransferase 1~ GT4~ complete;original_location=complement(1417203..1418591);owner=coffea | |
| 54666 chr11 manual_curation exon 4516738 4518291 . + . Parent=GSCOCT00019614001 | |
| 54667 chr11 manual_curation CDS 4516738 4518126 . + 0 Parent=GSCOCT00019614001 | |
| 54668 chr11 manual_curation gene 4589421 4597740 . + . ID=GSCOCG00019613001;Name=Cc11_g01190 | |
| 54669 chr11 manual_curation mRNA 4589421 4597740 . + . ID=GSCOCT00019613001;Parent=GSCOCG00019613001;Name=Cc11_g01190 | |
| 54670 chr11 manual_curation polypeptide 4589421 4597740 . + . ID=GSCOCP00019613001;Dbxref=InterPro:IPR006927,PFAM:PF04842,TAIR:AT1G48840.1,TAIR:AT3G18350.1,TAIR:AT5G23390.1,TrEMBL:B9RGJ0,TrEMBL:D7TXX8,TrEMBL:I1LFB8;Derives_from=GSCOCT00019613001;Name=Cc11_g01190;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Plant protein of unknown function (DUF639),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019613001~ Plant protein of unknown function (DUF639)~ unknown_gene~ complete;original_location=complement(join(1345586..1345908%2C1344437..1344671%2C1344177..1344263%2C1343840..1344009%2C1343141..1343283%2C1342596..1342770%2C1341932..1342526%2C1341181..1341293%2C1339156..1339399%2C1337589..1337813));owner=coffea | |
| 54671 chr11 manual_curation exon 4597516 4597740 . + . Parent=GSCOCT00019613001 | |
| 54672 chr11 manual_curation exon 4595930 4596173 . + . Parent=GSCOCT00019613001 | |
| 54673 chr11 manual_curation exon 4594036 4594148 . + . Parent=GSCOCT00019613001 | |
| 54674 chr11 manual_curation exon 4592803 4593397 . + . Parent=GSCOCT00019613001 | |
| 54675 chr11 manual_curation exon 4592559 4592733 . + . Parent=GSCOCT00019613001 | |
| 54676 chr11 manual_curation exon 4592046 4592188 . + . Parent=GSCOCT00019613001 | |
| 54677 chr11 manual_curation exon 4591320 4591489 . + . Parent=GSCOCT00019613001 | |
| 54678 chr11 manual_curation exon 4591066 4591152 . + . Parent=GSCOCT00019613001 | |
| 54679 chr11 manual_curation exon 4590658 4590892 . + . Parent=GSCOCT00019613001 | |
| 54680 chr11 manual_curation exon 4589421 4589743 . + . Parent=GSCOCT00019613001 | |
| 54681 chr11 manual_curation CDS 4597516 4597740 . + 0 Parent=GSCOCT00019613001 | |
| 54682 chr11 manual_curation CDS 4595930 4596173 . + 2 Parent=GSCOCT00019613001 | |
| 54683 chr11 manual_curation CDS 4594036 4594148 . + 0 Parent=GSCOCT00019613001 | |
| 54684 chr11 manual_curation CDS 4592803 4593397 . + 2 Parent=GSCOCT00019613001 | |
| 54685 chr11 manual_curation CDS 4592559 4592733 . + 1 Parent=GSCOCT00019613001 | |
| 54686 chr11 manual_curation CDS 4592046 4592188 . + 2 Parent=GSCOCT00019613001 | |
| 54687 chr11 manual_curation CDS 4591320 4591489 . + 0 Parent=GSCOCT00019613001 | |
| 54688 chr11 manual_curation CDS 4591066 4591152 . + 0 Parent=GSCOCT00019613001 | |
| 54689 chr11 manual_curation CDS 4590658 4590892 . + 2 Parent=GSCOCT00019613001 | |
| 54690 chr11 manual_curation CDS 4589421 4589743 . + 0 Parent=GSCOCT00019613001 | |
| 54691 chr11 manual_curation gene 4597878 4603224 . - . ID=GSCOCG00019612001;Name=Cc11_g01200 | |
| 54692 chr11 manual_curation mRNA 4597878 4603224 . - . ID=GSCOCT00019612001;Parent=GSCOCG00019612001;Name=Cc11_g01200 | |
| 54693 chr11 manual_curation polypeptide 4598862 4602851 . - . ID=GSCOCP00019612001;Dbxref=GENE3D:G3DSA:2.40.70.10,InterPro:IPR001461,InterPro:IPR001969,InterPro:IPR009007,InterPro:IPR021109,PANTHER:PTHR13683,PFAM:PF00026,PROSITE:PS00141,SUPERFAMILY:SSF50630,SwissProt:A2ZC67,SwissProt:Q0IU52,SwissProt:Q9S9K4,TAIR:AT1G44130.1,TAIR:AT1G77480.1,TAIR:AT4G33490.2,TrEMBL:A5C397,TrEMBL:D7SWG4,TrEMBL:Q5NT86;Derives_from=GSCOCT00019612001;Name=Cc11_g01200;Ontology_term=CC_evidence_code:ISS,GO:0004190,GO:0006508,CC_EC_number:missing_EC_number,PRODUCT:Putative Aspartic proteinase Asp1,CC_functional_completeness:complete,CC_gene:ASP1,CC_gene:At1g65240;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019612001~ Putative Aspartic proteinase Asp1~ ASP1~ complete;original_location=join(1332478..1332487%2C1332728..1332866%2C1333823..1333940%2C1334204..1334424%2C1334979..1335200%2C1335330..1335468%2C1335768..1335968%2C1336063..1336135%2C1336358..1336467);owner=coffea | |
| 54694 chr11 manual_curation exon 4602842 4603224 . - . Parent=GSCOCT00019612001 | |
| 54695 chr11 manual_curation exon 4602463 4602601 . - . Parent=GSCOCT00019612001 | |
| 54696 chr11 manual_curation exon 4601389 4601506 . - . Parent=GSCOCT00019612001 | |
| 54697 chr11 manual_curation exon 4600905 4601125 . - . Parent=GSCOCT00019612001 | |
| 54698 chr11 manual_curation exon 4600129 4600350 . - . Parent=GSCOCT00019612001 | |
| 54699 chr11 manual_curation exon 4599861 4599999 . - . Parent=GSCOCT00019612001 | |
| 54700 chr11 manual_curation exon 4599361 4599561 . - . Parent=GSCOCT00019612001 | |
| 54701 chr11 manual_curation exon 4599194 4599266 . - . Parent=GSCOCT00019612001 | |
| 54702 chr11 manual_curation exon 4597878 4598971 . - . Parent=GSCOCT00019612001 | |
| 54703 chr11 manual_curation CDS 4602842 4602851 . - 0 Parent=GSCOCT00019612001 | |
| 54704 chr11 manual_curation CDS 4602463 4602601 . - 1 Parent=GSCOCT00019612001 | |
| 54705 chr11 manual_curation CDS 4601389 4601506 . - 2 Parent=GSCOCT00019612001 | |
| 54706 chr11 manual_curation CDS 4600905 4601125 . - 0 Parent=GSCOCT00019612001 | |
| 54707 chr11 manual_curation CDS 4600129 4600350 . - 2 Parent=GSCOCT00019612001 | |
| 54708 chr11 manual_curation CDS 4599861 4599999 . - 2 Parent=GSCOCT00019612001 | |
| 54709 chr11 manual_curation CDS 4599361 4599561 . - 0 Parent=GSCOCT00019612001 | |
| 54710 chr11 manual_curation CDS 4599194 4599266 . - 0 Parent=GSCOCT00019612001 | |
| 54711 chr11 manual_curation CDS 4598862 4598971 . - 1 Parent=GSCOCT00019612001 | |
| 54712 chr11 manual_curation gene 4617890 4621098 . - . ID=GSCOCG00019610001;Name=Cc11_g01210 | |
| 54713 chr11 manual_curation mRNA 4617890 4621098 . - . ID=GSCOCT00019610001;Parent=GSCOCG00019610001;Name=Cc11_g01210 | |
| 54714 chr11 manual_curation polypeptide 4618142 4620167 . - . ID=GSCOCP00019610001;Dbxref=InterPro:IPR006566,InterPro:IPR013596,PFAM:PF08387,SMART:SM00579,TrEMBL:I1MIX0;Derives_from=GSCOCT00019610001;Name=Cc11_g01210;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019610001~ Putative Uncharacterized protein~ unknown_gene~ fragment;original_location=join(1315162..1315238%2C1315544..1315925%2C1316613..1316768%2C1316933..1317187);owner=coffea | |
| 54715 chr11 manual_curation exon 4620832 4621098 . - . Parent=GSCOCT00019610001 | |
| 54716 chr11 manual_curation exon 4620091 4620390 . - . Parent=GSCOCT00019610001 | |
| 54717 chr11 manual_curation exon 4619404 4619785 . - . Parent=GSCOCT00019610001 | |
| 54718 chr11 manual_curation exon 4618561 4618716 . - . Parent=GSCOCT00019610001 | |
| 54719 chr11 manual_curation exon 4617890 4618396 . - . Parent=GSCOCT00019610001 | |
| 54720 chr11 manual_curation CDS 4620091 4620167 . - 0 Parent=GSCOCT00019610001 | |
| 54721 chr11 manual_curation CDS 4619404 4619785 . - 2 Parent=GSCOCT00019610001 | |
| 54722 chr11 manual_curation CDS 4618561 4618716 . - 0 Parent=GSCOCT00019610001 | |
| 54723 chr11 manual_curation CDS 4618142 4618396 . - 0 Parent=GSCOCT00019610001 | |
| 54724 chr11 manual_curation gene 4684166 4684483 . + . ID=GSCOCG00019607001;Name=Cc11_g01220 | |
| 54725 chr11 manual_curation mRNA 4684166 4684483 . + . ID=GSCOCT00019607001;Parent=GSCOCG00019607001;Name=Cc11_g01220 | |
| 54726 chr11 manual_curation polypeptide 4684166 4684483 . + . ID=GSCOCP00019607001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:P0C899,SwissProt:Q9LTV8,SwissProt:Q9SS60,TAIR:AT3G03580.1,TAIR:AT3G12770.1,TAIR:AT3G49142.1,TrEMBL:A5AEL2,TrEMBL:B9N438,TrEMBL:I1MPC3;Derives_from=GSCOCT00019607001;Name=Cc11_g01220;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative pentatricopeptide repeat-containing protein At3g49142,CC_functional_completeness:fragment,CC_gene:PCMP-H77,CC_gene:PCMP-H23,CC_gene:PCMP-H43;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019607001~ Putative pentatricopeptide repeat-containing protein At3g49142~ PCMP-H77~ fragment;original_location=complement(1250846..1251163);owner=coffea | |
| 54727 chr11 manual_curation exon 4684166 4684483 . + . Parent=GSCOCT00019607001 | |
| 54728 chr11 manual_curation CDS 4684166 4684483 . + 0 Parent=GSCOCT00019607001 | |
| 54729 chr11 manual_curation gene 4684555 4685211 . + . ID=GSCOCG00019606001;Name=Cc11_g01230 | |
| 54730 chr11 manual_curation mRNA 4684555 4685211 . + . ID=GSCOCT00019606001;Parent=GSCOCG00019606001;Name=Cc11_g01230 | |
| 54731 chr11 manual_curation polypeptide 4684555 4685211 . + . ID=GSCOCP00019606001;Dbxref=InterPro:IPR005326,PFAM:PF03501,SwissProt:Q9AYP4,SwissProt:Q9LTF2,SwissProt:Q9SW09,TAIR:AT4G25740.1,TAIR:AT5G41520.1,TAIR:AT5G52650.1,TrEMBL:B4FB39,TrEMBL:B4FSW0,TrEMBL:B6T8E7;Derives_from=GSCOCT00019606001;Name=Cc11_g01230;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:RPS10A,CC_gene:RPS10C,CC_gene:RPS10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019606001~ Hypothetical protein~ RPS10A~ missing_functional_completeness;original_location=complement(join(1250403..1250774%2C1250118..1250138));owner=coffea | |
| 54732 chr11 manual_curation exon 4685191 4685211 . + . Parent=GSCOCT00019606001 | |
| 54733 chr11 manual_curation exon 4684555 4684926 . + . Parent=GSCOCT00019606001 | |
| 54734 chr11 manual_curation CDS 4685191 4685211 . + 0 Parent=GSCOCT00019606001 | |
| 54735 chr11 manual_curation CDS 4684555 4684926 . + 0 Parent=GSCOCT00019606001 | |
| 54736 chr11 manual_curation gene 4685265 4686498 . + . ID=GSCOCG00019605001;Name=Cc11_g01240 | |
| 54737 chr11 manual_curation mRNA 4685265 4686498 . + . ID=GSCOCT00019605001;Parent=GSCOCG00019605001;Name=Cc11_g01240 | |
| 54738 chr11 manual_curation polypeptide 4685265 4686498 . + . ID=GSCOCP00019605001;Dbxref=InterPro:IPR005031,PFAM:PF03364;Derives_from=GSCOCT00019605001;Name=Cc11_g01240;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Streptomyces cyclase/dehydrase,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019605001~ Putative Streptomyces cyclase/dehydrase~ unknown_gene~ complete;original_location=complement(join(1249908..1250064%2C1249626..1249759%2C1249465..1249550%2C1248831..1248879));owner=coffea | |
| 54739 chr11 manual_curation exon 4686450 4686498 . + . Parent=GSCOCT00019605001 | |
| 54740 chr11 manual_curation exon 4685779 4685864 . + . Parent=GSCOCT00019605001 | |
| 54741 chr11 manual_curation exon 4685570 4685703 . + . Parent=GSCOCT00019605001 | |
| 54742 chr11 manual_curation exon 4685265 4685421 . + . Parent=GSCOCT00019605001 | |
| 54743 chr11 manual_curation CDS 4686450 4686498 . + 2 Parent=GSCOCT00019605001 | |
| 54744 chr11 manual_curation CDS 4685779 4685864 . + 0 Parent=GSCOCT00019605001 | |
| 54745 chr11 manual_curation CDS 4685570 4685703 . + 1 Parent=GSCOCT00019605001 | |
| 54746 chr11 manual_curation CDS 4685265 4685421 . + 0 Parent=GSCOCT00019605001 | |
| 54747 chr11 manual_curation gene 4687393 4688276 . + . ID=GSCOCG00019604001;Name=Cc11_g01250 | |
| 54748 chr11 manual_curation mRNA 4687393 4688276 . + . ID=GSCOCT00019604001;Parent=GSCOCG00019604001;Name=Cc11_g01250 | |
| 54749 chr11 manual_curation polypeptide 4687393 4688033 . + . ID=GSCOCP00019604001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR015740,InterPro:IPR017442,InterPro:IPR020636,PANTHER:PTHR22982,PANTHER:PTHR22982:SF58,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00108,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:A2ZAB5,SwissProt:P0C5D6,SwissProt:Q75LR7,TAIR:AT1G60940.1,TAIR:AT4G33950.1,TAIR:AT5G66880.1,TrEMBL:B9N2V2,TrEMBL:B9RUQ6,TrEMBL:I1KBS6;Derives_from=GSCOCT00019604001;Name=Cc11_g01250;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,GO:0006970,CC_EC_number:2.7.11.1,PRODUCT:Serine/threonine-protein kinase SAPK1,CC_functional_completeness:fragment,CC_gene:SAPK1,CC_gene:SAPK3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019604001~ Serine/threonine-protein kinase SAPK1~ SAPK1~ fragment;original_location=complement(join(1247868..1247936%2C1247746..1247762%2C1247709..1247724%2C1247548..1247640%2C1247296..1247439));owner=coffea | |
| 54750 chr11 manual_curation exon 4687890 4688276 . + . Parent=GSCOCT00019604001 | |
| 54751 chr11 manual_curation exon 4687689 4687781 . + . Parent=GSCOCT00019604001 | |
| 54752 chr11 manual_curation exon 4687605 4687620 . + . Parent=GSCOCT00019604001 | |
| 54753 chr11 manual_curation exon 4687567 4687583 . + . Parent=GSCOCT00019604001 | |
| 54754 chr11 manual_curation exon 4687393 4687461 . + . Parent=GSCOCT00019604001 | |
| 54755 chr11 manual_curation CDS 4687890 4688033 . + 0 Parent=GSCOCT00019604001 | |
| 54756 chr11 manual_curation CDS 4687689 4687781 . + 0 Parent=GSCOCT00019604001 | |
| 54757 chr11 manual_curation CDS 4687605 4687620 . + 2 Parent=GSCOCT00019604001 | |
| 54758 chr11 manual_curation CDS 4687567 4687583 . + 0 Parent=GSCOCT00019604001 | |
| 54759 chr11 manual_curation CDS 4687393 4687461 . + 0 Parent=GSCOCT00019604001 | |
| 54760 chr11 manual_curation gene 4693316 4693649 . + . ID=GSCOCG00019603001;Name=Cc11_g01260 | |
| 54761 chr11 manual_curation mRNA 4693316 4693649 . + . ID=GSCOCT00019603001;Parent=GSCOCG00019603001;Name=Cc11_g01260 | |
| 54762 chr11 manual_curation polypeptide 4693316 4693547 . + . ID=GSCOCP00019603001;Derives_from=GSCOCT00019603001;Name=Cc11_g01260;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019603001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1241940..1242013%2C1241782..1241842));owner=coffea | |
| 54763 chr11 manual_curation exon 4693487 4693649 . + . Parent=GSCOCT00019603001 | |
| 54764 chr11 manual_curation exon 4693316 4693389 . + . Parent=GSCOCT00019603001 | |
| 54765 chr11 manual_curation CDS 4693487 4693547 . + 2 Parent=GSCOCT00019603001 | |
| 54766 chr11 manual_curation CDS 4693316 4693389 . + 0 Parent=GSCOCT00019603001 | |
| 54767 chr11 manual_curation gene 4708234 4712889 . - . ID=GSCOCG00019601001;Name=Cc11_g01270 | |
| 54768 chr11 manual_curation mRNA 4708234 4712889 . - . ID=GSCOCT00019601001;Parent=GSCOCG00019601001;Name=Cc11_g01270 | |
| 54769 chr11 manual_curation polypeptide 4708434 4712305 . - . ID=GSCOCP00019601001;Dbxref=GENE3D:G3DSA:2.40.50.140,InterPro:IPR002312,InterPro:IPR004364,InterPro:IPR004523,InterPro:IPR006195,InterPro:IPR012340,InterPro:IPR016027,InterPro:IPR018150,PANTHER:PTHR22594,PFAM:PF00152,PRINTS:PR01042,PROFILE:PS50862,SUPERFAMILY:SSF50249,SwissProt:P14868,SwissProt:P15178,SwissProt:Q922B2,TAIR:AT4G26870.1,TAIR:AT4G31180.1,TAIR:AT5G56680.1,TIGRFAMs:TIGR00458,TrEMBL:G7I885,TrEMBL:I1M984,TrEMBL:I1MX58;Derives_from=GSCOCT00019601001;Name=Cc11_g01270;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0004812,GO:0004815,GO:0005524,GO:0005737,GO:0006412,GO:0006418,GO:0006422,CC_EC_number:6.1.1.12,PRODUCT:Aspartate--tRNA ligase%2C cytoplasmic,CC_functional_completeness:complete,CC_gene:Dars,CC_gene:DARS;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019601001~ Aspartate--tRNA ligase%2C cytoplasmic~ Dars~ complete;original_location=join(1223024..1223122%2C1223392..1223502%2C1223719..1223832%2C1224200..1224490%2C1224564..1224674%2C1224763..1224816%2C1225278..1225357%2C1225485..1225600%2C1226346..1226460%2C1226769..1226895);owner=coffea | |
| 54770 chr11 manual_curation exon 4712207 4712889 . - . Parent=GSCOCT00019601001 | |
| 54771 chr11 manual_curation exon 4711827 4711937 . - . Parent=GSCOCT00019601001 | |
| 54772 chr11 manual_curation exon 4711497 4711610 . - . Parent=GSCOCT00019601001 | |
| 54773 chr11 manual_curation exon 4710839 4711129 . - . Parent=GSCOCT00019601001 | |
| 54774 chr11 manual_curation exon 4710655 4710765 . - . Parent=GSCOCT00019601001 | |
| 54775 chr11 manual_curation exon 4710513 4710566 . - . Parent=GSCOCT00019601001 | |
| 54776 chr11 manual_curation exon 4709972 4710051 . - . Parent=GSCOCT00019601001 | |
| 54777 chr11 manual_curation exon 4709729 4709844 . - . Parent=GSCOCT00019601001 | |
| 54778 chr11 manual_curation exon 4708869 4708983 . - . Parent=GSCOCT00019601001 | |
| 54779 chr11 manual_curation exon 4708234 4708560 . - . Parent=GSCOCT00019601001 | |
| 54780 chr11 manual_curation CDS 4712207 4712305 . - 0 Parent=GSCOCT00019601001 | |
| 54781 chr11 manual_curation CDS 4711827 4711937 . - 0 Parent=GSCOCT00019601001 | |
| 54782 chr11 manual_curation CDS 4711497 4711610 . - 0 Parent=GSCOCT00019601001 | |
| 54783 chr11 manual_curation CDS 4710839 4711129 . - 0 Parent=GSCOCT00019601001 | |
| 54784 chr11 manual_curation CDS 4710655 4710765 . - 0 Parent=GSCOCT00019601001 | |
| 54785 chr11 manual_curation CDS 4710513 4710566 . - 0 Parent=GSCOCT00019601001 | |
| 54786 chr11 manual_curation CDS 4709972 4710051 . - 0 Parent=GSCOCT00019601001 | |
| 54787 chr11 manual_curation CDS 4709729 4709844 . - 2 Parent=GSCOCT00019601001 | |
| 54788 chr11 manual_curation CDS 4708869 4708983 . - 1 Parent=GSCOCT00019601001 | |
| 54789 chr11 manual_curation CDS 4708434 4708560 . - 2 Parent=GSCOCT00019601001 | |
| 54790 chr11 manual_curation gene 4778147 4779769 . + . ID=GSCOCG00019597001;Name=Cc11_g01280 | |
| 54791 chr11 manual_curation mRNA 4778147 4779769 . + . ID=GSCOCT00019597001;Parent=GSCOCG00019597001;Name=Cc11_g01280 | |
| 54792 chr11 manual_curation polypeptide 4778147 4779769 . + . ID=GSCOCP00019597001;Dbxref=InterPro:IPR005123,PFAM:PF03171,SwissProt:Q39103,SwissProt:Q9SVS8,SwissProt:Q9ZT84,TAIR:AT1G15550.1,TAIR:AT1G80340.1,TAIR:AT4G21690.1,TrEMBL:B9IKS1,TrEMBL:D7SUP3,TrEMBL:Q6F6H5;Derives_from=GSCOCT00019597001;Name=Cc11_g01280;Ontology_term=CC_evidence_code:ISS,GO:0016491,CC_EC_number:1.14.11.15,PRODUCT:Putative Gibberellin 3-beta-dioxygenase 1,CC_functional_completeness:complete,CC_gene:GA4,CC_gene:At4g21690,CC_gene:GA4H;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019597001~ Putative Gibberellin 3-beta-dioxygenase 1~ GA4~ complete;original_location=complement(join(1156683..1157182%2C1155560..1156097));owner=coffea | |
| 54793 chr11 manual_curation exon 4779232 4779769 . + . Parent=GSCOCT00019597001 | |
| 54794 chr11 manual_curation exon 4778147 4778646 . + . Parent=GSCOCT00019597001 | |
| 54795 chr11 manual_curation CDS 4779232 4779769 . + 2 Parent=GSCOCT00019597001 | |
| 54796 chr11 manual_curation CDS 4778147 4778646 . + 0 Parent=GSCOCT00019597001 | |
| 54797 chr11 manual_curation gene 4802132 4808367 . - . ID=GSCOCG00019596001;Name=Cc11_g01290 | |
| 54798 chr11 manual_curation mRNA 4802132 4808367 . - . ID=GSCOCT00019596001;Parent=GSCOCG00019596001;Name=Cc11_g01290 | |
| 54799 chr11 manual_curation polypeptide 4802132 4808317 . - . ID=GSCOCP00019596001;Dbxref=SwissProt:Q5ZKI4,SwissProt:Q640U7,SwissProt:Q7TQK5,TAIR:AT4G32560.1,TrEMBL:B9H9Q5,TrEMBL:B9RPC9,TrEMBL:D7SUP2;Derives_from=GSCOCT00019596001;Name=Cc11_g01290;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Coiled-coil domain-containing protein 93,CC_functional_completeness:fragment,CC_gene:ccdc93,CC_gene:Ccdc93,CC_gene:CCDC93;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019596001~ Putative Coiled-coil domain-containing protein 93~ ccdc93~ fragment;original_location=join(1127012..1127020%2C1127146..1127226%2C1127927..1128106%2C1128766..1128845%2C1129155..1129194%2C1129292..1129399%2C1131766..1131846%2C1133063..1133197);owner=coffea | |
| 54800 chr11 manual_curation exon 4808309 4808367 . - . Parent=GSCOCT00019596001 | |
| 54801 chr11 manual_curation exon 4808103 4808183 . - . Parent=GSCOCT00019596001 | |
| 54802 chr11 manual_curation exon 4807223 4807402 . - . Parent=GSCOCT00019596001 | |
| 54803 chr11 manual_curation exon 4806484 4806563 . - . Parent=GSCOCT00019596001 | |
| 54804 chr11 manual_curation exon 4806135 4806174 . - . Parent=GSCOCT00019596001 | |
| 54805 chr11 manual_curation exon 4805930 4806037 . - . Parent=GSCOCT00019596001 | |
| 54806 chr11 manual_curation exon 4803483 4803563 . - . Parent=GSCOCT00019596001 | |
| 54807 chr11 manual_curation exon 4802132 4802266 . - . Parent=GSCOCT00019596001 | |
| 54808 chr11 manual_curation CDS 4808309 4808317 . - 0 Parent=GSCOCT00019596001 | |
| 54809 chr11 manual_curation CDS 4808103 4808183 . - 0 Parent=GSCOCT00019596001 | |
| 54810 chr11 manual_curation CDS 4807223 4807402 . - 0 Parent=GSCOCT00019596001 | |
| 54811 chr11 manual_curation CDS 4806484 4806563 . - 0 Parent=GSCOCT00019596001 | |
| 54812 chr11 manual_curation CDS 4806135 4806174 . - 2 Parent=GSCOCT00019596001 | |
| 54813 chr11 manual_curation CDS 4805930 4806037 . - 0 Parent=GSCOCT00019596001 | |
| 54814 chr11 manual_curation CDS 4803483 4803563 . - 0 Parent=GSCOCT00019596001 | |
| 54815 chr11 manual_curation CDS 4802132 4802266 . - 0 Parent=GSCOCT00019596001 | |
| 54816 chr11 manual_curation gene 4811066 4819076 . + . ID=GSCOCG00019594001;Name=Cc11_g01300 | |
| 54817 chr11 manual_curation mRNA 4811066 4819076 . + . ID=GSCOCT00019594001;Parent=GSCOCG00019594001;Name=Cc11_g01300 | |
| 54818 chr11 manual_curation polypeptide 4811164 4818735 . + . ID=GSCOCP00019594001;Dbxref=InterPro:IPR002194,InterPro:IPR002423,InterPro:IPR012720,InterPro:IPR017998,PANTHER:PTHR11353,PANTHER:PTHR11353:SF22,PFAM:PF00118,PRINTS:PR00304,PROSITE:PS00750,PROSITE:PS00751,PROSITE:PS00995,SUPERFAMILY:SSF48592,SwissProt:P80313,SwissProt:Q2NKZ1,SwissProt:Q5ZJK8,TAIR:AT3G11830.1,TAIR:AT3G20050.1,TAIR:AT5G20890.1,TIGRFAMs:TIGR02345,TrEMBL:B9MYQ8,TrEMBL:G7K2W1,TrEMBL:I1M7B9;Derives_from=GSCOCT00019594001;Name=Cc11_g01300;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0005524,GO:0006457,GO:0044267,GO:0051082,CC_EC_number:missing_EC_number,PRODUCT:T-complex protein 1 subunit eta,CC_functional_completeness:complete,CC_gene:Cct7,CC_gene:CCT7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019594001~ T-complex protein 1 subunit eta~ Cct7~ complete;original_location=complement(join(1124151..1124165%2C1123054..1123314%2C1122137..1122262%2C1121840..1122043%2C1120208..1120377%2C1119978..1120113%2C1119484..1119600%2C1119193..1119312%2C1119021..1119119%2C1118840..1118929%2C1118005..1118092%2C1117729..1117817%2C1117550..1117624%2C1116594..1116692));owner=coffea | |
| 54819 chr11 manual_curation exon 4818637 4819076 . + . Parent=GSCOCT00019594001 | |
| 54820 chr11 manual_curation exon 4817705 4817779 . + . Parent=GSCOCT00019594001 | |
| 54821 chr11 manual_curation exon 4817512 4817600 . + . Parent=GSCOCT00019594001 | |
| 54822 chr11 manual_curation exon 4817237 4817324 . + . Parent=GSCOCT00019594001 | |
| 54823 chr11 manual_curation exon 4816400 4816489 . + . Parent=GSCOCT00019594001 | |
| 54824 chr11 manual_curation exon 4816210 4816308 . + . Parent=GSCOCT00019594001 | |
| 54825 chr11 manual_curation exon 4816017 4816136 . + . Parent=GSCOCT00019594001 | |
| 54826 chr11 manual_curation exon 4815729 4815845 . + . Parent=GSCOCT00019594001 | |
| 54827 chr11 manual_curation exon 4815216 4815351 . + . Parent=GSCOCT00019594001 | |
| 54828 chr11 manual_curation exon 4814952 4815121 . + . Parent=GSCOCT00019594001 | |
| 54829 chr11 manual_curation exon 4813286 4813489 . + . Parent=GSCOCT00019594001 | |
| 54830 chr11 manual_curation exon 4813067 4813192 . + . Parent=GSCOCT00019594001 | |
| 54831 chr11 manual_curation exon 4812015 4812275 . + . Parent=GSCOCT00019594001 | |
| 54832 chr11 manual_curation exon 4811066 4811178 . + . Parent=GSCOCT00019594001 | |
| 54833 chr11 manual_curation CDS 4818637 4818735 . + 0 Parent=GSCOCT00019594001 | |
| 54834 chr11 manual_curation CDS 4817705 4817779 . + 0 Parent=GSCOCT00019594001 | |
| 54835 chr11 manual_curation CDS 4817512 4817600 . + 1 Parent=GSCOCT00019594001 | |
| 54836 chr11 manual_curation CDS 4817237 4817324 . + 0 Parent=GSCOCT00019594001 | |
| 54837 chr11 manual_curation CDS 4816400 4816489 . + 0 Parent=GSCOCT00019594001 | |
| 54838 chr11 manual_curation CDS 4816210 4816308 . + 0 Parent=GSCOCT00019594001 | |
| 54839 chr11 manual_curation CDS 4816017 4816136 . + 0 Parent=GSCOCT00019594001 | |
| 54840 chr11 manual_curation CDS 4815729 4815845 . + 0 Parent=GSCOCT00019594001 | |
| 54841 chr11 manual_curation CDS 4815216 4815351 . + 2 Parent=GSCOCT00019594001 | |
| 54842 chr11 manual_curation CDS 4814952 4815121 . + 0 Parent=GSCOCT00019594001 | |
| 54843 chr11 manual_curation CDS 4813286 4813489 . + 0 Parent=GSCOCT00019594001 | |
| 54844 chr11 manual_curation CDS 4813067 4813192 . + 0 Parent=GSCOCT00019594001 | |
| 54845 chr11 manual_curation CDS 4812015 4812275 . + 0 Parent=GSCOCT00019594001 | |
| 54846 chr11 manual_curation CDS 4811164 4811178 . + 0 Parent=GSCOCT00019594001 | |
| 54847 chr11 manual_curation gene 4823913 4827897 . - . ID=GSCOCG00019592001;Name=Cc11_g01310 | |
| 54848 chr11 manual_curation mRNA 4823913 4827897 . - . ID=GSCOCT00019592001;Parent=GSCOCG00019592001;Name=Cc11_g01310 | |
| 54849 chr11 manual_curation polypeptide 4825037 4827897 . - . ID=GSCOCP00019592001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019775,InterPro:IPR019781,InterPro:IPR019782,PFAM:PF00400,PROFILE:PS50082,PROFILE:PS50294,PROSITE:PS00678,SMART:SM00320,SUPERFAMILY:SSF50978,SwissProt:Q00808,SwissProt:Q8YRI1,SwissProt:Q9FUY2,TAIR:AT2G32700.7,TAIR:AT4G32551.2,TAIR:AT5G25150.1,TrEMBL:B9RPC6,TrEMBL:G7I6C1,TrEMBL:Q6H976;Derives_from=GSCOCT00019592001;Name=Cc11_g01310;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Transcriptional corepressor LEUNIG,CC_functional_completeness:fragment,CC_gene:LUG,CC_gene:HET-E1,CC_gene:alr3466;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019592001~ Transcriptional corepressor LEUNIG~ LUG~ fragment;original_location=join(1107432..1107462%2C1107721..1107830%2C1107953..1108102%2C1108948..1109103%2C1109266..1109382%2C1109954..1110292);owner=coffea | |
| 54850 chr11 manual_curation exon 4827867 4827897 . - . Parent=GSCOCT00019592001 | |
| 54851 chr11 manual_curation exon 4827499 4827608 . - . Parent=GSCOCT00019592001 | |
| 54852 chr11 manual_curation exon 4827227 4827376 . - . Parent=GSCOCT00019592001 | |
| 54853 chr11 manual_curation exon 4826226 4826381 . - . Parent=GSCOCT00019592001 | |
| 54854 chr11 manual_curation exon 4825947 4826063 . - . Parent=GSCOCT00019592001 | |
| 54855 chr11 manual_curation exon 4823913 4825375 . - . Parent=GSCOCT00019592001 | |
| 54856 chr11 manual_curation CDS 4827867 4827897 . - 0 Parent=GSCOCT00019592001 | |
| 54857 chr11 manual_curation CDS 4827499 4827608 . - 1 Parent=GSCOCT00019592001 | |
| 54858 chr11 manual_curation CDS 4827227 4827376 . - 0 Parent=GSCOCT00019592001 | |
| 54859 chr11 manual_curation CDS 4826226 4826381 . - 0 Parent=GSCOCT00019592001 | |
| 54860 chr11 manual_curation CDS 4825947 4826063 . - 0 Parent=GSCOCT00019592001 | |
| 54861 chr11 manual_curation CDS 4825037 4825375 . - 0 Parent=GSCOCT00019592001 | |
| 54862 chr11 manual_curation gene 4830630 4831511 . + . ID=GSCOCG00019590001;Name=Cc11_g01320 | |
| 54863 chr11 manual_curation mRNA 4830630 4831511 . + . ID=GSCOCT00019590001;Parent=GSCOCG00019590001;Name=Cc11_g01320 | |
| 54864 chr11 manual_curation polypeptide 4830630 4831511 . + . ID=GSCOCP00019590001;Dbxref=InterPro:IPR006094,InterPro:IPR016166,PFAM:PF01565,PROFILE:PS51387,SUPERFAMILY:SSF56176,SwissProt:P30986,SwissProt:P93479,SwissProt:Q9SVG4,TAIR:AT1G26380.1,TAIR:AT1G26410.1,TAIR:AT1G26420.1,TrEMBL:A5BZS5,TrEMBL:F6HM01,TrEMBL:I1L0H6;Derives_from=GSCOCT00019590001;Name=Cc11_g01320;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0016491,GO:0050660,CC_EC_number:1.21.3.3,PRODUCT:Putative Reticuline oxidase-like protein,CC_functional_completeness:fragment,CC_gene:At4g20830,CC_gene:BBE1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019590001~ Putative Reticuline oxidase-like protein~ At4g20830~ fragment;original_location=complement(join(1104207..1104699%2C1103818..1104158));owner=coffea | |
| 54865 chr11 manual_curation exon 4831171 4831511 . + . Parent=GSCOCT00019590001 | |
| 54866 chr11 manual_curation exon 4830630 4831122 . + . Parent=GSCOCT00019590001 | |
| 54867 chr11 manual_curation CDS 4831171 4831511 . + 1 Parent=GSCOCT00019590001 | |
| 54868 chr11 manual_curation CDS 4830630 4831122 . + 0 Parent=GSCOCT00019590001 | |
| 54869 chr11 manual_curation gene 4839815 4844568 . - . ID=GSCOCG00019589001;Name=Cc11_g01330 | |
| 54870 chr11 manual_curation mRNA 4839815 4844568 . - . ID=GSCOCT00019589001;Parent=GSCOCG00019589001;Name=Cc11_g01330 | |
| 54871 chr11 manual_curation polypeptide 4840656 4844568 . - . ID=GSCOCP00019589001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019775,InterPro:IPR019781,InterPro:IPR019782,PFAM:PF00400,PROFILE:PS50082,PROFILE:PS50294,PROSITE:PS00678,SMART:SM00320,SUPERFAMILY:SSF50978,SwissProt:Q00808,SwissProt:Q8YRI1,SwissProt:Q9FUY2,TAIR:AT2G32700.7,TAIR:AT4G32551.2,TAIR:AT5G25150.1,TrEMBL:F6H3T5,TrEMBL:I1M9M2,TrEMBL:Q6H976;Derives_from=GSCOCT00019589001;Name=Cc11_g01330;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Transcriptional corepressor LEUNIG,CC_functional_completeness:fragment,CC_gene:LUG,CC_gene:HET-E1,CC_gene:alr3466;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019589001~ Transcriptional corepressor LEUNIG~ LUG~ fragment;original_location=join(1090761..1091018%2C1091094..1091235%2C1092162..1092271%2C1092394..1092543%2C1093354..1093509%2C1093673..1093789%2C1094353..1094673);owner=coffea | |
| 54872 chr11 manual_curation exon 4844311 4844568 . - . Parent=GSCOCT00019589001 | |
| 54873 chr11 manual_curation exon 4844094 4844235 . - . Parent=GSCOCT00019589001 | |
| 54874 chr11 manual_curation exon 4843058 4843167 . - . Parent=GSCOCT00019589001 | |
| 54875 chr11 manual_curation exon 4842786 4842935 . - . Parent=GSCOCT00019589001 | |
| 54876 chr11 manual_curation exon 4841820 4841975 . - . Parent=GSCOCT00019589001 | |
| 54877 chr11 manual_curation exon 4841540 4841656 . - . Parent=GSCOCT00019589001 | |
| 54878 chr11 manual_curation exon 4839815 4840976 . - . Parent=GSCOCT00019589001 | |
| 54879 chr11 manual_curation CDS 4844311 4844568 . - 0 Parent=GSCOCT00019589001 | |
| 54880 chr11 manual_curation CDS 4844094 4844235 . - 0 Parent=GSCOCT00019589001 | |
| 54881 chr11 manual_curation CDS 4843058 4843167 . - 1 Parent=GSCOCT00019589001 | |
| 54882 chr11 manual_curation CDS 4842786 4842935 . - 0 Parent=GSCOCT00019589001 | |
| 54883 chr11 manual_curation CDS 4841820 4841975 . - 0 Parent=GSCOCT00019589001 | |
| 54884 chr11 manual_curation CDS 4841540 4841656 . - 0 Parent=GSCOCT00019589001 | |
| 54885 chr11 manual_curation CDS 4840656 4840976 . - 0 Parent=GSCOCT00019589001 | |
| 54886 chr11 manual_curation gene 4844824 4853619 . - . ID=GSCOCG00019588001;Name=Cc11_g01340 | |
| 54887 chr11 manual_curation mRNA 4844824 4853619 . - . ID=GSCOCT00019588001;Parent=GSCOCG00019588001;Name=Cc11_g01340 | |
| 54888 chr11 manual_curation polypeptide 4845080 4853049 . - . ID=GSCOCP00019588001;Dbxref=InterPro:IPR006594,InterPro:IPR008116,InterPro:IPR013720,PANTHER:PTHR12610,PFAM:PF08513,PROFILE:PS50896,SMART:SM00667,TAIR:AT2G32700.7,TrEMBL:G7JBP5,TrEMBL:I1JUH3,TrEMBL:Q6H976;Derives_from=GSCOCT00019588001;Name=Cc11_g01340;Ontology_term=CC_evidence_code:ISS,GO:0003697,GO:0030528,CC_EC_number:missing_EC_number,PRODUCT:STYLOSA protein,CC_functional_completeness:fragment,CC_gene:LUG;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019588001~ STYLOSA protein~ LUG~ fragment;original_location=join(1082280..1082311%2C1083174..1083271%2C1083352..1083461%2C1085469..1085912%2C1086722..1086795%2C1087001..1087079%2C1087232..1087307%2C1087499..1087548%2C1088482..1088793%2C1089408..1089611%2C1090181..1090249);owner=coffea | |
| 54889 chr11 manual_curation exon 4853457 4853619 . - . Parent=GSCOCT00019588001 | |
| 54890 chr11 manual_curation exon 4853018 4853131 . - . Parent=GSCOCT00019588001 | |
| 54891 chr11 manual_curation exon 4852058 4852155 . - . Parent=GSCOCT00019588001 | |
| 54892 chr11 manual_curation exon 4851868 4851977 . - . Parent=GSCOCT00019588001 | |
| 54893 chr11 manual_curation exon 4849417 4849860 . - . Parent=GSCOCT00019588001 | |
| 54894 chr11 manual_curation exon 4848534 4848607 . - . Parent=GSCOCT00019588001 | |
| 54895 chr11 manual_curation exon 4848250 4848328 . - . Parent=GSCOCT00019588001 | |
| 54896 chr11 manual_curation exon 4848022 4848097 . - . Parent=GSCOCT00019588001 | |
| 54897 chr11 manual_curation exon 4847781 4847830 . - . Parent=GSCOCT00019588001 | |
| 54898 chr11 manual_curation exon 4846536 4846847 . - . Parent=GSCOCT00019588001 | |
| 54899 chr11 manual_curation exon 4845718 4845921 . - . Parent=GSCOCT00019588001 | |
| 54900 chr11 manual_curation exon 4844824 4845148 . - . Parent=GSCOCT00019588001 | |
| 54901 chr11 manual_curation CDS 4853018 4853049 . - 0 Parent=GSCOCT00019588001 | |
| 54902 chr11 manual_curation CDS 4852058 4852155 . - 2 Parent=GSCOCT00019588001 | |
| 54903 chr11 manual_curation CDS 4851868 4851977 . - 1 Parent=GSCOCT00019588001 | |
| 54904 chr11 manual_curation CDS 4849417 4849860 . - 0 Parent=GSCOCT00019588001 | |
| 54905 chr11 manual_curation CDS 4848534 4848607 . - 0 Parent=GSCOCT00019588001 | |
| 54906 chr11 manual_curation CDS 4848250 4848328 . - 2 Parent=GSCOCT00019588001 | |
| 54907 chr11 manual_curation CDS 4848022 4848097 . - 0 Parent=GSCOCT00019588001 | |
| 54908 chr11 manual_curation CDS 4847781 4847830 . - 1 Parent=GSCOCT00019588001 | |
| 54909 chr11 manual_curation CDS 4846536 4846847 . - 0 Parent=GSCOCT00019588001 | |
| 54910 chr11 manual_curation CDS 4845718 4845921 . - 0 Parent=GSCOCT00019588001 | |
| 54911 chr11 manual_curation CDS 4845080 4845148 . - 0 Parent=GSCOCT00019588001 | |
| 54912 chr11 manual_curation gene 4880034 4882906 . + . ID=GSCOCG00019583001;Name=Cc11_g01350 | |
| 54913 chr11 manual_curation mRNA 4880034 4882906 . + . ID=GSCOCT00019583001;Parent=GSCOCG00019583001;Name=Cc11_g01350 | |
| 54914 chr11 manual_curation polypeptide 4880034 4882906 . + . ID=GSCOCP00019583001;Dbxref=InterPro:IPR001280,PFAM:PF00223,SwissProt:Q2PMU3,SwissProt:Q8MFA3,SwissProt:Q9MUJ0,TAIR:ATCG00350.1;Derives_from=GSCOCT00019583001;Name=Cc11_g01350;Ontology_term=CC_evidence_code:ISS,GO:0009522,GO:0009579,GO:0015979,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Putative Photosystem I PsaA/PsaB,CC_functional_completeness:complete,CC_gene:psaA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019583001~ Putative Photosystem I PsaA/PsaB~ psaA~ complete;original_location=complement(join(1055256..1055295%2C1055141..1055146%2C1054791..1055047%2C1052423..1052539));owner=coffea | |
| 54915 chr11 manual_curation exon 4882790 4882906 . + . Parent=GSCOCT00019583001 | |
| 54916 chr11 manual_curation exon 4880282 4880538 . + . Parent=GSCOCT00019583001 | |
| 54917 chr11 manual_curation exon 4880183 4880188 . + . Parent=GSCOCT00019583001 | |
| 54918 chr11 manual_curation exon 4880034 4880073 . + . Parent=GSCOCT00019583001 | |
| 54919 chr11 manual_curation CDS 4882790 4882906 . + 0 Parent=GSCOCT00019583001 | |
| 54920 chr11 manual_curation CDS 4880282 4880538 . + 1 Parent=GSCOCT00019583001 | |
| 54921 chr11 manual_curation CDS 4880183 4880188 . + 1 Parent=GSCOCT00019583001 | |
| 54922 chr11 manual_curation CDS 4880034 4880073 . + 0 Parent=GSCOCT00019583001 | |
| 54923 chr11 manual_curation gene 4890814 4893603 . - . ID=GSCOCG00019580001;Name=Cc11_g01360 | |
| 54924 chr11 manual_curation mRNA 4890814 4893603 . - . ID=GSCOCT00019580001;Parent=GSCOCG00019580001;Name=Cc11_g01360 | |
| 54925 chr11 manual_curation polypeptide 4890835 4893603 . - . ID=GSCOCP00019580001;Dbxref=InterPro:IPR000103,InterPro:IPR013027,InterPro:IPR020946,PFAM:PF00743,PRINTS:PR00368,PRINTS:PR00469,SwissProt:O23024,SwissProt:Q9LFM5,SwissProt:Q9SZY8,TAIR:AT1G04610.1,TAIR:AT4G32540.1,TAIR:AT5G11320.1,TrEMBL:A0PDH1,TrEMBL:A5AKJ6,TrEMBL:B9RPC4;Derives_from=GSCOCT00019580001;Name=Cc11_g01360;Ontology_term=CC_evidence_code:ISS,GO:0004499,GO:0016491,GO:0050660,GO:0050661,GO:0055114,CC_EC_number:1.14.13.8,CC_EC_number:1.14.13.8,PRODUCT:Flavin-containing monooxygenase YUCCA4,CC_functional_completeness:complete,CC_gene:YUC4,CC_gene:YUC1,CC_gene:YUC3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019580001~ Flavin-containing monooxygenase YUCCA4~ YUC4~ complete;original_location=join(1041726..1042361%2C1042517..1042765%2C1042904..1043026%2C1044306..1044494);owner=coffea | |
| 54926 chr11 manual_curation exon 4892968 4893603 . - . Parent=GSCOCT00019580001 | |
| 54927 chr11 manual_curation exon 4892564 4892812 . - . Parent=GSCOCT00019580001 | |
| 54928 chr11 manual_curation exon 4892303 4892425 . - . Parent=GSCOCT00019580001 | |
| 54929 chr11 manual_curation exon 4890814 4891023 . - . Parent=GSCOCT00019580001 | |
| 54930 chr11 manual_curation CDS 4892968 4893603 . - 0 Parent=GSCOCT00019580001 | |
| 54931 chr11 manual_curation CDS 4892564 4892812 . - 0 Parent=GSCOCT00019580001 | |
| 54932 chr11 manual_curation CDS 4892303 4892425 . - 0 Parent=GSCOCT00019580001 | |
| 54933 chr11 manual_curation CDS 4890835 4891023 . - 0 Parent=GSCOCT00019580001 | |
| 54934 chr11 manual_curation gene 4943644 4944327 . - . ID=GSCOCG00019578001;Name=Cc11_g01370 | |
| 54935 chr11 manual_curation mRNA 4943644 4944327 . - . ID=GSCOCT00019578001;Parent=GSCOCG00019578001;Name=Cc11_g01370 | |
| 54936 chr11 manual_curation polypeptide 4943644 4944327 . - . ID=GSCOCP00019578001;Dbxref=InterPro:IPR001757,PANTHER:PTHR11939,SwissProt:P19456,SwissProt:Q03194,SwissProt:Q7XPY2,TAIR:AT2G18960.1,TAIR:AT2G24520.1,TAIR:AT4G30190.2,TrEMBL:A5C9X8,TrEMBL:D7SQD1,TrEMBL:Q7Y067;Derives_from=GSCOCT00019578001;Name=Cc11_g01370;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006754,GO:0016020,CC_EC_number:3.6.3.6,PRODUCT:Plasma membrane ATPase 4,CC_functional_completeness:fragment,CC_gene:PMA4,CC_gene:Os04g0656100,CC_gene:AHA2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019578001~ Plasma membrane ATPase 4~ PMA4~ fragment;original_location=991002..991685;owner=coffea | |
| 54937 chr11 manual_curation exon 4943644 4944327 . - . Parent=GSCOCT00019578001 | |
| 54938 chr11 manual_curation CDS 4943644 4944327 . - 0 Parent=GSCOCT00019578001 | |
| 54939 chr11 manual_curation gene 4960313 4961806 . - . ID=GSCOCG00019574001;Name=Cc11_g01380 | |
| 54940 chr11 manual_curation mRNA 4960313 4961806 . - . ID=GSCOCT00019574001;Parent=GSCOCG00019574001;Name=Cc11_g01380 | |
| 54941 chr11 manual_curation polypeptide 4960709 4961347 . - . ID=GSCOCP00019574001;Dbxref=TAIR:AT2G25625.1,TrEMBL:A5BJF3,TrEMBL:B9H9Q9,TrEMBL:B9RKU9;Derives_from=GSCOCT00019574001;Name=Cc11_g01380;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019574001~ Putative unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 10 plant structures%3B EXPRESSED DURING: LP.06 six leaves visible%2C LP.04 four leaves visible%2C 4 anthesis%2C petal differentiation and expansion stage%3B Has 24 Blast hits to 24 proteins in 9 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 24%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(973982..974082%2C974257..974620);owner=coffea | |
| 54942 chr11 manual_curation exon 4961247 4961806 . - . Parent=GSCOCT00019574001 | |
| 54943 chr11 manual_curation exon 4960313 4961072 . - . Parent=GSCOCT00019574001 | |
| 54944 chr11 manual_curation CDS 4961247 4961347 . - 0 Parent=GSCOCT00019574001 | |
| 54945 chr11 manual_curation CDS 4960709 4961072 . - 2 Parent=GSCOCT00019574001 | |
| 54946 chr11 manual_curation gene 4977938 4981255 . - . ID=GSCOCG00019572001;Name=Cc11_g01390 | |
| 54947 chr11 manual_curation mRNA 4977938 4981255 . - . ID=GSCOCT00019572001;Parent=GSCOCG00019572001;Name=Cc11_g01390 | |
| 54948 chr11 manual_curation polypeptide 4978680 4981255 . - . ID=GSCOCP00019572001;Derives_from=GSCOCT00019572001;Name=Cc11_g01390;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019572001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(954074..954159%2C956547..956649);owner=coffea | |
| 54949 chr11 manual_curation exon 4981170 4981255 . - . Parent=GSCOCT00019572001 | |
| 54950 chr11 manual_curation exon 4977938 4978782 . - . Parent=GSCOCT00019572001 | |
| 54951 chr11 manual_curation CDS 4981170 4981255 . - 0 Parent=GSCOCT00019572001 | |
| 54952 chr11 manual_curation CDS 4978680 4978782 . - 2 Parent=GSCOCT00019572001 | |
| 54953 chr11 manual_curation gene 4984180 4984853 . - . ID=GSCOCG00019571001;Name=Cc11_g01400 | |
| 54954 chr11 manual_curation mRNA 4984180 4984853 . - . ID=GSCOCT00019571001;Parent=GSCOCG00019571001;Name=Cc11_g01400 | |
| 54955 chr11 manual_curation polypeptide 4984180 4984539 . - . ID=GSCOCP00019571001;Derives_from=GSCOCT00019571001;Name=Cc11_g01400;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019571001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(950790..950965%2C951065..951149);owner=coffea | |
| 54956 chr11 manual_curation exon 4984364 4984853 . - . Parent=GSCOCT00019571001 | |
| 54957 chr11 manual_curation exon 4984180 4984264 . - . Parent=GSCOCT00019571001 | |
| 54958 chr11 manual_curation CDS 4984364 4984539 . - 0 Parent=GSCOCT00019571001 | |
| 54959 chr11 manual_curation CDS 4984180 4984264 . - 2 Parent=GSCOCT00019571001 | |
| 54960 chr11 manual_curation gene 5022834 5026882 . + . ID=GSCOCG00019569001;Name=Cc11_g01410 | |
| 54961 chr11 manual_curation mRNA 5022834 5026882 . + . ID=GSCOCT00019569001;Parent=GSCOCG00019569001;Name=Cc11_g01410 | |
| 54962 chr11 manual_curation polypeptide 5023192 5026882 . + . ID=GSCOCP00019569001;Dbxref=GENE3D:G3DSA:3.60.40.10,InterPro:IPR000222,InterPro:IPR001932,InterPro:IPR014045,InterPro:IPR015655,PANTHER:PTHR13832,PFAM:PF00481,PROSITE:PS01032,SMART:SM00332,SUPERFAMILY:SSF81606,SwissProt:Q69QZ0,SwissProt:Q69VD9,SwissProt:Q9SLA1,TAIR:AT2G25620.1,TAIR:AT2G33700.1,TAIR:AT3G51470.1,TrEMBL:D7SUM8,TrEMBL:I1JUH0,TrEMBL:Q8S8Z1;Derives_from=GSCOCT00019569001;Name=Cc11_g01410;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004722,GO:0006470,GO:0008287,CC_EC_number:3.1.3.16,PRODUCT:Probable protein phosphatase 2C 22,CC_functional_completeness:complete,CC_gene:At2g25620,CC_gene:Os06g0597200,CC_gene:Os02g0799000;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019569001~ Probable protein phosphatase 2C 22~ At2g25620~ complete;original_location=complement(join(911943..912137%2C910944..911147%2C909707..909918%2C908447..909011));owner=coffea | |
| 54963 chr11 manual_curation exon 5026318 5026882 . + . Parent=GSCOCT00019569001 | |
| 54964 chr11 manual_curation exon 5025411 5025622 . + . Parent=GSCOCT00019569001 | |
| 54965 chr11 manual_curation exon 5024182 5024385 . + . Parent=GSCOCT00019569001 | |
| 54966 chr11 manual_curation exon 5022834 5023386 . + . Parent=GSCOCT00019569001 | |
| 54967 chr11 manual_curation CDS 5026318 5026882 . + 2 Parent=GSCOCT00019569001 | |
| 54968 chr11 manual_curation CDS 5025411 5025622 . + 0 Parent=GSCOCT00019569001 | |
| 54969 chr11 manual_curation CDS 5024182 5024385 . + 0 Parent=GSCOCT00019569001 | |
| 54970 chr11 manual_curation CDS 5023192 5023386 . + 0 Parent=GSCOCT00019569001 | |
| 54971 chr11 manual_curation gene 5027103 5045543 . - . ID=GSCOCG00019568001;Name=Cc11_g01420 | |
| 54972 chr11 manual_curation mRNA 5027103 5045543 . - . ID=GSCOCT00019568001;Parent=GSCOCG00019568001;Name=Cc11_g01420 | |
| 54973 chr11 manual_curation polypeptide 5027530 5045378 . - . ID=GSCOCP00019568001;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR013525,InterPro:IPR013581,PFAM:PF00005,PFAM:PF01061,PFAM:PF08370,PROFILE:PS50893,SMART:SM00382,SwissProt:Q76CU2,SwissProt:Q8GU88,SwissProt:Q8GU89,TAIR:AT1G15520.1,TAIR:AT1G66950.1,TAIR:AT2G36380.1,TrEMBL:D7SUM9,TrEMBL:H6WS93,TrEMBL:H6WS94;Derives_from=GSCOCT00019568001;Name=Cc11_g01420;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0016020,GO:0016887,GO:0017111,CC_EC_number:3.6.3.30,CC_EC_number:3.6.3.30,PRODUCT:Pleiotropic drug resistance protein 1,CC_functional_completeness:complete,CC_gene:PDR1,CC_gene:PDR4,CC_gene:PDR7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019568001~ Pleiotropic drug resistance protein 1~ PDR1~ complete;original_location=join(889951..890321%2C890424..890544%2C890630..890718%2C890799..890883%2C890972..891131%2C891238..891314%2C891453..891506%2C891609..891699%2C892018..892319%2C892436..892717%2C892832..893148%2C893639..893799%2C893900..894003%2C894090..894246%2C894335..894439%2C894515..894675%2C894964..895296%2C895399..895689%2C895780..895863%2C895944..896077%2C896220..896447%2C896555..896726%2C896899..897153%2C897252..897505%2C897556..897629%2C897776..897984%2C898892..898939%2C899214..899415%2C899952..900024%2C900712..900941%2C901004..901058%2C901208..901328%2C901408..901496%2C901574..901658%2C901741..901900%2C902001..902077%2C902196..902249%2C902335..902425%2C902781..903082%2C903187..903468%2C903581..903897%2C904078..904238%2C904306..904442%2C904551..904707%2C904807..904896%2C904955..905118%2C905223..905555%2C905641..905931%2C906014..906097%2C906179..906312%2C906521..906748%2C906868..907039%2C907191..907445%2C907542..907799);owner=coffea | |
| 54974 chr11 manual_curation exon 5045008 5045543 . - . Parent=GSCOCT00019568001 | |
| 54975 chr11 manual_curation exon 5044785 5044905 . - . Parent=GSCOCT00019568001 | |
| 54976 chr11 manual_curation exon 5044611 5044699 . - . Parent=GSCOCT00019568001 | |
| 54977 chr11 manual_curation exon 5044446 5044530 . - . Parent=GSCOCT00019568001 | |
| 54978 chr11 manual_curation exon 5044198 5044357 . - . Parent=GSCOCT00019568001 | |
| 54979 chr11 manual_curation exon 5044015 5044091 . - . Parent=GSCOCT00019568001 | |
| 54980 chr11 manual_curation exon 5043823 5043876 . - . Parent=GSCOCT00019568001 | |
| 54981 chr11 manual_curation exon 5043630 5043720 . - . Parent=GSCOCT00019568001 | |
| 54982 chr11 manual_curation exon 5043010 5043311 . - . Parent=GSCOCT00019568001 | |
| 54983 chr11 manual_curation exon 5042612 5042893 . - . Parent=GSCOCT00019568001 | |
| 54984 chr11 manual_curation exon 5042181 5042497 . - . Parent=GSCOCT00019568001 | |
| 54985 chr11 manual_curation exon 5041530 5041690 . - . Parent=GSCOCT00019568001 | |
| 54986 chr11 manual_curation exon 5041326 5041429 . - . Parent=GSCOCT00019568001 | |
| 54987 chr11 manual_curation exon 5041083 5041239 . - . Parent=GSCOCT00019568001 | |
| 54988 chr11 manual_curation exon 5040890 5040994 . - . Parent=GSCOCT00019568001 | |
| 54989 chr11 manual_curation exon 5040654 5040814 . - . Parent=GSCOCT00019568001 | |
| 54990 chr11 manual_curation exon 5040033 5040365 . - . Parent=GSCOCT00019568001 | |
| 54991 chr11 manual_curation exon 5039640 5039930 . - . Parent=GSCOCT00019568001 | |
| 54992 chr11 manual_curation exon 5039466 5039549 . - . Parent=GSCOCT00019568001 | |
| 54993 chr11 manual_curation exon 5039252 5039385 . - . Parent=GSCOCT00019568001 | |
| 54994 chr11 manual_curation exon 5038882 5039109 . - . Parent=GSCOCT00019568001 | |
| 54995 chr11 manual_curation exon 5038603 5038774 . - . Parent=GSCOCT00019568001 | |
| 54996 chr11 manual_curation exon 5038176 5038430 . - . Parent=GSCOCT00019568001 | |
| 54997 chr11 manual_curation exon 5037824 5038077 . - . Parent=GSCOCT00019568001 | |
| 54998 chr11 manual_curation exon 5037700 5037773 . - . Parent=GSCOCT00019568001 | |
| 54999 chr11 manual_curation exon 5037345 5037553 . - . Parent=GSCOCT00019568001 | |
| 55000 chr11 manual_curation exon 5036390 5036437 . - . Parent=GSCOCT00019568001 | |
| 55001 chr11 manual_curation exon 5035914 5036115 . - . Parent=GSCOCT00019568001 | |
| 55002 chr11 manual_curation exon 5035305 5035377 . - . Parent=GSCOCT00019568001 | |
| 55003 chr11 manual_curation exon 5034388 5034617 . - . Parent=GSCOCT00019568001 | |
| 55004 chr11 manual_curation exon 5034271 5034325 . - . Parent=GSCOCT00019568001 | |
| 55005 chr11 manual_curation exon 5034001 5034121 . - . Parent=GSCOCT00019568001 | |
| 55006 chr11 manual_curation exon 5033833 5033921 . - . Parent=GSCOCT00019568001 | |
| 55007 chr11 manual_curation exon 5033671 5033755 . - . Parent=GSCOCT00019568001 | |
| 55008 chr11 manual_curation exon 5033429 5033588 . - . Parent=GSCOCT00019568001 | |
| 55009 chr11 manual_curation exon 5033252 5033328 . - . Parent=GSCOCT00019568001 | |
| 55010 chr11 manual_curation exon 5033080 5033133 . - . Parent=GSCOCT00019568001 | |
| 55011 chr11 manual_curation exon 5032904 5032994 . - . Parent=GSCOCT00019568001 | |
| 55012 chr11 manual_curation exon 5032247 5032548 . - . Parent=GSCOCT00019568001 | |
| 55013 chr11 manual_curation exon 5031861 5032142 . - . Parent=GSCOCT00019568001 | |
| 55014 chr11 manual_curation exon 5031432 5031748 . - . Parent=GSCOCT00019568001 | |
| 55015 chr11 manual_curation exon 5031091 5031251 . - . Parent=GSCOCT00019568001 | |
| 55016 chr11 manual_curation exon 5030887 5031023 . - . Parent=GSCOCT00019568001 | |
| 55017 chr11 manual_curation exon 5030622 5030778 . - . Parent=GSCOCT00019568001 | |
| 55018 chr11 manual_curation exon 5030433 5030522 . - . Parent=GSCOCT00019568001 | |
| 55019 chr11 manual_curation exon 5030211 5030374 . - . Parent=GSCOCT00019568001 | |
| 55020 chr11 manual_curation exon 5029774 5030106 . - . Parent=GSCOCT00019568001 | |
| 55021 chr11 manual_curation exon 5029398 5029688 . - . Parent=GSCOCT00019568001 | |
| 55022 chr11 manual_curation exon 5029232 5029315 . - . Parent=GSCOCT00019568001 | |
| 55023 chr11 manual_curation exon 5029017 5029150 . - . Parent=GSCOCT00019568001 | |
| 55024 chr11 manual_curation exon 5028581 5028808 . - . Parent=GSCOCT00019568001 | |
| 55025 chr11 manual_curation exon 5028290 5028461 . - . Parent=GSCOCT00019568001 | |
| 55026 chr11 manual_curation exon 5027884 5028138 . - . Parent=GSCOCT00019568001 | |
| 55027 chr11 manual_curation exon 5027103 5027787 . - . Parent=GSCOCT00019568001 | |
| 55028 chr11 manual_curation CDS 5045008 5045378 . - 0 Parent=GSCOCT00019568001 | |
| 55029 chr11 manual_curation CDS 5044785 5044905 . - 2 Parent=GSCOCT00019568001 | |
| 55030 chr11 manual_curation CDS 5044611 5044699 . - 0 Parent=GSCOCT00019568001 | |
| 55031 chr11 manual_curation CDS 5044446 5044530 . - 2 Parent=GSCOCT00019568001 | |
| 55032 chr11 manual_curation CDS 5044198 5044357 . - 0 Parent=GSCOCT00019568001 | |
| 55033 chr11 manual_curation CDS 5044015 5044091 . - 1 Parent=GSCOCT00019568001 | |
| 55034 chr11 manual_curation CDS 5043823 5043876 . - 0 Parent=GSCOCT00019568001 | |
| 55035 chr11 manual_curation CDS 5043630 5043720 . - 0 Parent=GSCOCT00019568001 | |
| 55036 chr11 manual_curation CDS 5043010 5043311 . - 1 Parent=GSCOCT00019568001 | |
| 55037 chr11 manual_curation CDS 5042612 5042893 . - 0 Parent=GSCOCT00019568001 | |
| 55038 chr11 manual_curation CDS 5042181 5042497 . - 0 Parent=GSCOCT00019568001 | |
| 55039 chr11 manual_curation CDS 5041530 5041690 . - 2 Parent=GSCOCT00019568001 | |
| 55040 chr11 manual_curation CDS 5041326 5041429 . - 1 Parent=GSCOCT00019568001 | |
| 55041 chr11 manual_curation CDS 5041083 5041239 . - 0 Parent=GSCOCT00019568001 | |
| 55042 chr11 manual_curation CDS 5040890 5040994 . - 1 Parent=GSCOCT00019568001 | |
| 55043 chr11 manual_curation CDS 5040654 5040814 . - 1 Parent=GSCOCT00019568001 | |
| 55044 chr11 manual_curation CDS 5040033 5040365 . - 0 Parent=GSCOCT00019568001 | |
| 55045 chr11 manual_curation CDS 5039640 5039930 . - 0 Parent=GSCOCT00019568001 | |
| 55046 chr11 manual_curation CDS 5039466 5039549 . - 0 Parent=GSCOCT00019568001 | |
| 55047 chr11 manual_curation CDS 5039252 5039385 . - 0 Parent=GSCOCT00019568001 | |
| 55048 chr11 manual_curation CDS 5038882 5039109 . - 2 Parent=GSCOCT00019568001 | |
| 55049 chr11 manual_curation CDS 5038603 5038774 . - 2 Parent=GSCOCT00019568001 | |
| 55050 chr11 manual_curation CDS 5038176 5038430 . - 0 Parent=GSCOCT00019568001 | |
| 55051 chr11 manual_curation CDS 5037824 5038077 . - 0 Parent=GSCOCT00019568001 | |
| 55052 chr11 manual_curation CDS 5037700 5037773 . - 2 Parent=GSCOCT00019568001 | |
| 55053 chr11 manual_curation CDS 5037345 5037553 . - 1 Parent=GSCOCT00019568001 | |
| 55054 chr11 manual_curation CDS 5036390 5036437 . - 0 Parent=GSCOCT00019568001 | |
| 55055 chr11 manual_curation CDS 5035914 5036115 . - 0 Parent=GSCOCT00019568001 | |
| 55056 chr11 manual_curation CDS 5035305 5035377 . - 1 Parent=GSCOCT00019568001 | |
| 55057 chr11 manual_curation CDS 5034388 5034617 . - 2 Parent=GSCOCT00019568001 | |
| 55058 chr11 manual_curation CDS 5034271 5034325 . - 1 Parent=GSCOCT00019568001 | |
| 55059 chr11 manual_curation CDS 5034001 5034121 . - 2 Parent=GSCOCT00019568001 | |
| 55060 chr11 manual_curation CDS 5033833 5033921 . - 0 Parent=GSCOCT00019568001 | |
| 55061 chr11 manual_curation CDS 5033671 5033755 . - 2 Parent=GSCOCT00019568001 | |
| 55062 chr11 manual_curation CDS 5033429 5033588 . - 0 Parent=GSCOCT00019568001 | |
| 55063 chr11 manual_curation CDS 5033252 5033328 . - 1 Parent=GSCOCT00019568001 | |
| 55064 chr11 manual_curation CDS 5033080 5033133 . - 0 Parent=GSCOCT00019568001 | |
| 55065 chr11 manual_curation CDS 5032904 5032994 . - 0 Parent=GSCOCT00019568001 | |
| 55066 chr11 manual_curation CDS 5032247 5032548 . - 1 Parent=GSCOCT00019568001 | |
| 55067 chr11 manual_curation CDS 5031861 5032142 . - 0 Parent=GSCOCT00019568001 | |
| 55068 chr11 manual_curation CDS 5031432 5031748 . - 0 Parent=GSCOCT00019568001 | |
| 55069 chr11 manual_curation CDS 5031091 5031251 . - 2 Parent=GSCOCT00019568001 | |
| 55070 chr11 manual_curation CDS 5030887 5031023 . - 1 Parent=GSCOCT00019568001 | |
| 55071 chr11 manual_curation CDS 5030622 5030778 . - 0 Parent=GSCOCT00019568001 | |
| 55072 chr11 manual_curation CDS 5030433 5030522 . - 1 Parent=GSCOCT00019568001 | |
| 55073 chr11 manual_curation CDS 5030211 5030374 . - 1 Parent=GSCOCT00019568001 | |
| 55074 chr11 manual_curation CDS 5029774 5030106 . - 0 Parent=GSCOCT00019568001 | |
| 55075 chr11 manual_curation CDS 5029398 5029688 . - 0 Parent=GSCOCT00019568001 | |
| 55076 chr11 manual_curation CDS 5029232 5029315 . - 0 Parent=GSCOCT00019568001 | |
| 55077 chr11 manual_curation CDS 5029017 5029150 . - 0 Parent=GSCOCT00019568001 | |
| 55078 chr11 manual_curation CDS 5028581 5028808 . - 2 Parent=GSCOCT00019568001 | |
| 55079 chr11 manual_curation CDS 5028290 5028461 . - 2 Parent=GSCOCT00019568001 | |
| 55080 chr11 manual_curation CDS 5027884 5028138 . - 0 Parent=GSCOCT00019568001 | |
| 55081 chr11 manual_curation CDS 5027530 5027787 . - 0 Parent=GSCOCT00019568001 | |
| 55082 chr11 manual_curation gene 5050181 5059727 . - . ID=GSCOCG00019567001;Name=Cc11_g01430 | |
| 55083 chr11 manual_curation mRNA 5050181 5059727 . - . ID=GSCOCT00019567001;Parent=GSCOCG00019567001;Name=Cc11_g01430 | |
| 55084 chr11 manual_curation polypeptide 5050181 5059727 . - . ID=GSCOCP00019567001;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR013525,PFAM:PF00005,PFAM:PF01061,PROFILE:PS50893,SMART:SM00382,SwissProt:Q76CU2,SwissProt:Q8GU88,SwissProt:Q9M9E1,TAIR:AT1G15520.1,TAIR:AT1G66950.1,TAIR:AT2G26910.1,TrEMBL:B9RJZ6,TrEMBL:H6WS93,TrEMBL:H6WS94;Derives_from=GSCOCT00019567001;Name=Cc11_g01430;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0016020,GO:0016887,GO:0017111,CC_EC_number:3.6.3.28,CC_EC_number:3.6.3.28,PRODUCT:Pleiotropic drug resistance protein 1,CC_functional_completeness:complete,CC_gene:PDR1,CC_gene:ABCG40,CC_gene:PDR7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019567001~ Pleiotropic drug resistance protein 1~ PDR1~ complete;original_location=join(875602..875927%2C875997..876157%2C876264..876367%2C876740..876827%2C876903..877066%2C877387..877719%2C877818..878108%2C878192..878275%2C878379..878512%2C878773..879000%2C879109..879280%2C879481..879735%2C879832..880070%2C880798..880841%2C881151..881473%2C882537..882603%2C882733..882932%2C883031..883111%2C885065..885148);owner=coffea | |
| 55085 chr11 manual_curation exon 5059402 5059727 . - . Parent=GSCOCT00019567001 | |
| 55086 chr11 manual_curation exon 5059172 5059332 . - . Parent=GSCOCT00019567001 | |
| 55087 chr11 manual_curation exon 5058962 5059065 . - . Parent=GSCOCT00019567001 | |
| 55088 chr11 manual_curation exon 5058502 5058589 . - . Parent=GSCOCT00019567001 | |
| 55089 chr11 manual_curation exon 5058263 5058426 . - . Parent=GSCOCT00019567001 | |
| 55090 chr11 manual_curation exon 5057610 5057942 . - . Parent=GSCOCT00019567001 | |
| 55091 chr11 manual_curation exon 5057221 5057511 . - . Parent=GSCOCT00019567001 | |
| 55092 chr11 manual_curation exon 5057054 5057137 . - . Parent=GSCOCT00019567001 | |
| 55093 chr11 manual_curation exon 5056817 5056950 . - . Parent=GSCOCT00019567001 | |
| 55094 chr11 manual_curation exon 5056329 5056556 . - . Parent=GSCOCT00019567001 | |
| 55095 chr11 manual_curation exon 5056049 5056220 . - . Parent=GSCOCT00019567001 | |
| 55096 chr11 manual_curation exon 5055594 5055848 . - . Parent=GSCOCT00019567001 | |
| 55097 chr11 manual_curation exon 5055259 5055497 . - . Parent=GSCOCT00019567001 | |
| 55098 chr11 manual_curation exon 5054488 5054531 . - . Parent=GSCOCT00019567001 | |
| 55099 chr11 manual_curation exon 5053856 5054178 . - . Parent=GSCOCT00019567001 | |
| 55100 chr11 manual_curation exon 5052726 5052792 . - . Parent=GSCOCT00019567001 | |
| 55101 chr11 manual_curation exon 5052397 5052596 . - . Parent=GSCOCT00019567001 | |
| 55102 chr11 manual_curation exon 5052218 5052298 . - . Parent=GSCOCT00019567001 | |
| 55103 chr11 manual_curation exon 5050181 5050264 . - . Parent=GSCOCT00019567001 | |
| 55104 chr11 manual_curation CDS 5059402 5059727 . - 0 Parent=GSCOCT00019567001 | |
| 55105 chr11 manual_curation CDS 5059172 5059332 . - 2 Parent=GSCOCT00019567001 | |
| 55106 chr11 manual_curation CDS 5058962 5059065 . - 1 Parent=GSCOCT00019567001 | |
| 55107 chr11 manual_curation CDS 5058502 5058589 . - 0 Parent=GSCOCT00019567001 | |
| 55108 chr11 manual_curation CDS 5058263 5058426 . - 1 Parent=GSCOCT00019567001 | |
| 55109 chr11 manual_curation CDS 5057610 5057942 . - 0 Parent=GSCOCT00019567001 | |
| 55110 chr11 manual_curation CDS 5057221 5057511 . - 0 Parent=GSCOCT00019567001 | |
| 55111 chr11 manual_curation CDS 5057054 5057137 . - 0 Parent=GSCOCT00019567001 | |
| 55112 chr11 manual_curation CDS 5056817 5056950 . - 0 Parent=GSCOCT00019567001 | |
| 55113 chr11 manual_curation CDS 5056329 5056556 . - 2 Parent=GSCOCT00019567001 | |
| 55114 chr11 manual_curation CDS 5056049 5056220 . - 2 Parent=GSCOCT00019567001 | |
| 55115 chr11 manual_curation CDS 5055594 5055848 . - 0 Parent=GSCOCT00019567001 | |
| 55116 chr11 manual_curation CDS 5055259 5055497 . - 0 Parent=GSCOCT00019567001 | |
| 55117 chr11 manual_curation CDS 5054488 5054531 . - 2 Parent=GSCOCT00019567001 | |
| 55118 chr11 manual_curation CDS 5053856 5054178 . - 1 Parent=GSCOCT00019567001 | |
| 55119 chr11 manual_curation CDS 5052726 5052792 . - 0 Parent=GSCOCT00019567001 | |
| 55120 chr11 manual_curation CDS 5052397 5052596 . - 1 Parent=GSCOCT00019567001 | |
| 55121 chr11 manual_curation CDS 5052218 5052298 . - 0 Parent=GSCOCT00019567001 | |
| 55122 chr11 manual_curation CDS 5050181 5050264 . - 0 Parent=GSCOCT00019567001 | |
| 55123 chr11 manual_curation gene 5059827 5063029 . - . ID=GSCOCG00019566001;Name=Cc11_g01440 | |
| 55124 chr11 manual_curation mRNA 5059827 5063029 . - . ID=GSCOCT00019566001;Parent=GSCOCG00019566001;Name=Cc11_g01440 | |
| 55125 chr11 manual_curation polypeptide 5059827 5063029 . - . ID=GSCOCP00019566001;Dbxref=InterPro:IPR003439,PROFILE:PS50893,SwissProt:Q76CU2,SwissProt:Q8GU88,SwissProt:Q949G3,TAIR:AT1G66950.1,TAIR:AT2G36380.1,TAIR:AT3G30842.1,TrEMBL:A5B3P5,TrEMBL:A5BAG5,TrEMBL:D7SUM9;Derives_from=GSCOCT00019566001;Name=Cc11_g01440;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0016887,CC_EC_number:missing_EC_number,PRODUCT:Pleiotropic drug resistance protein 1,CC_functional_completeness:fragment,CC_gene:PDR1,CC_gene:PDR7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019566001~ Pleiotropic drug resistance protein 1~ PDR1~ fragment;original_location=join(872300..872619%2C872702..872731%2C872773..872893%2C873554..873667%2C873764..873819%2C874165..874258%2C874380..874433%2C874526..874616%2C874783..874980%2C875065..875084%2C875188..875502);owner=coffea | |
| 55126 chr11 manual_curation exon 5062710 5063029 . - . Parent=GSCOCT00019566001 | |
| 55127 chr11 manual_curation exon 5062598 5062627 . - . Parent=GSCOCT00019566001 | |
| 55128 chr11 manual_curation exon 5062436 5062556 . - . Parent=GSCOCT00019566001 | |
| 55129 chr11 manual_curation exon 5061662 5061775 . - . Parent=GSCOCT00019566001 | |
| 55130 chr11 manual_curation exon 5061510 5061565 . - . Parent=GSCOCT00019566001 | |
| 55131 chr11 manual_curation exon 5061071 5061164 . - . Parent=GSCOCT00019566001 | |
| 55132 chr11 manual_curation exon 5060896 5060949 . - . Parent=GSCOCT00019566001 | |
| 55133 chr11 manual_curation exon 5060713 5060803 . - . Parent=GSCOCT00019566001 | |
| 55134 chr11 manual_curation exon 5060349 5060546 . - . Parent=GSCOCT00019566001 | |
| 55135 chr11 manual_curation exon 5060245 5060264 . - . Parent=GSCOCT00019566001 | |
| 55136 chr11 manual_curation exon 5059827 5060141 . - . Parent=GSCOCT00019566001 | |
| 55137 chr11 manual_curation CDS 5062710 5063029 . - 0 Parent=GSCOCT00019566001 | |
| 55138 chr11 manual_curation CDS 5062598 5062627 . - 2 Parent=GSCOCT00019566001 | |
| 55139 chr11 manual_curation CDS 5062436 5062556 . - 2 Parent=GSCOCT00019566001 | |
| 55140 chr11 manual_curation CDS 5061662 5061775 . - 0 Parent=GSCOCT00019566001 | |
| 55141 chr11 manual_curation CDS 5061510 5061565 . - 0 Parent=GSCOCT00019566001 | |
| 55142 chr11 manual_curation CDS 5061071 5061164 . - 2 Parent=GSCOCT00019566001 | |
| 55143 chr11 manual_curation CDS 5060896 5060949 . - 0 Parent=GSCOCT00019566001 | |
| 55144 chr11 manual_curation CDS 5060713 5060803 . - 0 Parent=GSCOCT00019566001 | |
| 55145 chr11 manual_curation CDS 5060349 5060546 . - 1 Parent=GSCOCT00019566001 | |
| 55146 chr11 manual_curation CDS 5060245 5060264 . - 1 Parent=GSCOCT00019566001 | |
| 55147 chr11 manual_curation CDS 5059827 5060141 . - 0 Parent=GSCOCT00019566001 | |
| 55148 chr11 manual_curation gene 5082427 5084890 . - . ID=GSCOCG00019564001;Name=Cc11_g01450 | |
| 55149 chr11 manual_curation mRNA 5082427 5084890 . - . ID=GSCOCT00019564001;Parent=GSCOCG00019564001;Name=Cc11_g01450 | |
| 55150 chr11 manual_curation polypeptide 5082427 5084890 . - . ID=GSCOCP00019564001;Dbxref=InterPro:IPR013525,PFAM:PF01061,SwissProt:A2WSH0,SwissProt:Q0JLC5,SwissProt:Q9M9E1,TAIR:AT1G15520.1,TAIR:AT2G26910.1,TAIR:AT3G30842.1,TrEMBL:C8CA13,TrEMBL:H6WS93,TrEMBL:H6WS94;Derives_from=GSCOCT00019564001;Name=Cc11_g01450;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:ABC transporter G family member 40,CC_functional_completeness:fragment,CC_gene:ABCG40,CC_gene:PDR3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019564001~ ABC transporter G family member 40~ ABCG40~ fragment;original_location=join(850439..850507%2C850616..850699%2C850803..850936%2C851651..851878%2C851962..852133%2C852302..852553%2C852642..852902);owner=coffea | |
| 55151 chr11 manual_curation exon 5084822 5084890 . - . Parent=GSCOCT00019564001 | |
| 55152 chr11 manual_curation exon 5084630 5084713 . - . Parent=GSCOCT00019564001 | |
| 55153 chr11 manual_curation exon 5084393 5084526 . - . Parent=GSCOCT00019564001 | |
| 55154 chr11 manual_curation exon 5083451 5083678 . - . Parent=GSCOCT00019564001 | |
| 55155 chr11 manual_curation exon 5083196 5083367 . - . Parent=GSCOCT00019564001 | |
| 55156 chr11 manual_curation exon 5082776 5083027 . - . Parent=GSCOCT00019564001 | |
| 55157 chr11 manual_curation exon 5082427 5082687 . - . Parent=GSCOCT00019564001 | |
| 55158 chr11 manual_curation CDS 5084822 5084890 . - 0 Parent=GSCOCT00019564001 | |
| 55159 chr11 manual_curation CDS 5084630 5084713 . - 0 Parent=GSCOCT00019564001 | |
| 55160 chr11 manual_curation CDS 5084393 5084526 . - 0 Parent=GSCOCT00019564001 | |
| 55161 chr11 manual_curation CDS 5083451 5083678 . - 2 Parent=GSCOCT00019564001 | |
| 55162 chr11 manual_curation CDS 5083196 5083367 . - 2 Parent=GSCOCT00019564001 | |
| 55163 chr11 manual_curation CDS 5082776 5083027 . - 0 Parent=GSCOCT00019564001 | |
| 55164 chr11 manual_curation CDS 5082427 5082687 . - 0 Parent=GSCOCT00019564001 | |
| 55165 chr11 manual_curation gene 5094276 5100260 . - . ID=GSCOCG00019563001;Name=Cc11_g01460 | |
| 55166 chr11 manual_curation mRNA 5094276 5100260 . - . ID=GSCOCT00019563001;Parent=GSCOCG00019563001;Name=Cc11_g01460 | |
| 55167 chr11 manual_curation polypeptide 5094276 5100260 . - . ID=GSCOCP00019563001;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR013525,PFAM:PF00005,PFAM:PF01061,PROFILE:PS50893,SMART:SM00382,SwissProt:Q76CU2,SwissProt:Q8GU88,SwissProt:Q9M9E1,TAIR:AT1G15520.1,TAIR:AT1G66950.1,TAIR:AT2G36380.1,TrEMBL:B9RJZ6,TrEMBL:H6WS93,TrEMBL:H6WS94;Derives_from=GSCOCT00019563001;Name=Cc11_g01460;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0016020,GO:0016887,GO:0017111,CC_EC_number:3.6.3.28,CC_EC_number:3.6.3.28,PRODUCT:Putative Pleiotropic drug resistance protein 1,CC_functional_completeness:complete,CC_gene:PDR1,CC_gene:PDR7,CC_gene:ABCG40;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019563001~ Putative Pleiotropic drug resistance protein 1~ PDR1~ complete;original_location=join(835069..835391%2C835502..835622%2C835744..835832%2C835915..835999%2C836101..836260%2C836357..836441%2C836564..836660%2C836924..837014%2C837260..837561%2C837653..837934%2C838064..838380%2C838481..838641%2C838752..838877%2C838949..839132%2C839479..839581%2C839730..839864%2C839918..839957%2C840201..840597%2C840735..841053);owner=coffea | |
| 55168 chr11 manual_curation exon 5099938 5100260 . - . Parent=GSCOCT00019563001 | |
| 55169 chr11 manual_curation exon 5099707 5099827 . - . Parent=GSCOCT00019563001 | |
| 55170 chr11 manual_curation exon 5099497 5099585 . - . Parent=GSCOCT00019563001 | |
| 55171 chr11 manual_curation exon 5099330 5099414 . - . Parent=GSCOCT00019563001 | |
| 55172 chr11 manual_curation exon 5099069 5099228 . - . Parent=GSCOCT00019563001 | |
| 55173 chr11 manual_curation exon 5098888 5098972 . - . Parent=GSCOCT00019563001 | |
| 55174 chr11 manual_curation exon 5098669 5098765 . - . Parent=GSCOCT00019563001 | |
| 55175 chr11 manual_curation exon 5098315 5098405 . - . Parent=GSCOCT00019563001 | |
| 55176 chr11 manual_curation exon 5097768 5098069 . - . Parent=GSCOCT00019563001 | |
| 55177 chr11 manual_curation exon 5097395 5097676 . - . Parent=GSCOCT00019563001 | |
| 55178 chr11 manual_curation exon 5096949 5097265 . - . Parent=GSCOCT00019563001 | |
| 55179 chr11 manual_curation exon 5096688 5096848 . - . Parent=GSCOCT00019563001 | |
| 55180 chr11 manual_curation exon 5096452 5096577 . - . Parent=GSCOCT00019563001 | |
| 55181 chr11 manual_curation exon 5096197 5096380 . - . Parent=GSCOCT00019563001 | |
| 55182 chr11 manual_curation exon 5095748 5095850 . - . Parent=GSCOCT00019563001 | |
| 55183 chr11 manual_curation exon 5095465 5095599 . - . Parent=GSCOCT00019563001 | |
| 55184 chr11 manual_curation exon 5095372 5095411 . - . Parent=GSCOCT00019563001 | |
| 55185 chr11 manual_curation exon 5094732 5095128 . - . Parent=GSCOCT00019563001 | |
| 55186 chr11 manual_curation exon 5094276 5094594 . - . Parent=GSCOCT00019563001 | |
| 55187 chr11 manual_curation CDS 5099938 5100260 . - 0 Parent=GSCOCT00019563001 | |
| 55188 chr11 manual_curation CDS 5099707 5099827 . - 2 Parent=GSCOCT00019563001 | |
| 55189 chr11 manual_curation CDS 5099497 5099585 . - 0 Parent=GSCOCT00019563001 | |
| 55190 chr11 manual_curation CDS 5099330 5099414 . - 2 Parent=GSCOCT00019563001 | |
| 55191 chr11 manual_curation CDS 5099069 5099228 . - 0 Parent=GSCOCT00019563001 | |
| 55192 chr11 manual_curation CDS 5098888 5098972 . - 1 Parent=GSCOCT00019563001 | |
| 55193 chr11 manual_curation CDS 5098669 5098765 . - 2 Parent=GSCOCT00019563001 | |
| 55194 chr11 manual_curation CDS 5098315 5098405 . - 0 Parent=GSCOCT00019563001 | |
| 55195 chr11 manual_curation CDS 5097768 5098069 . - 1 Parent=GSCOCT00019563001 | |
| 55196 chr11 manual_curation CDS 5097395 5097676 . - 0 Parent=GSCOCT00019563001 | |
| 55197 chr11 manual_curation CDS 5096949 5097265 . - 0 Parent=GSCOCT00019563001 | |
| 55198 chr11 manual_curation CDS 5096688 5096848 . - 2 Parent=GSCOCT00019563001 | |
| 55199 chr11 manual_curation CDS 5096452 5096577 . - 1 Parent=GSCOCT00019563001 | |
| 55200 chr11 manual_curation CDS 5096197 5096380 . - 1 Parent=GSCOCT00019563001 | |
| 55201 chr11 manual_curation CDS 5095748 5095850 . - 2 Parent=GSCOCT00019563001 | |
| 55202 chr11 manual_curation CDS 5095465 5095599 . - 0 Parent=GSCOCT00019563001 | |
| 55203 chr11 manual_curation CDS 5095372 5095411 . - 0 Parent=GSCOCT00019563001 | |
| 55204 chr11 manual_curation CDS 5094732 5095128 . - 1 Parent=GSCOCT00019563001 | |
| 55205 chr11 manual_curation CDS 5094276 5094594 . - 2 Parent=GSCOCT00019563001 | |
| 55206 chr11 manual_curation gene 5113197 5120566 . - . ID=GSCOCG00019562001;Name=Cc11_g01470 | |
| 55207 chr11 manual_curation mRNA 5113197 5120566 . - . ID=GSCOCT00019562001;Parent=GSCOCG00019562001;Name=Cc11_g01470 | |
| 55208 chr11 manual_curation polypeptide 5113345 5120566 . - . ID=GSCOCP00019562001;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR013525,InterPro:IPR013581,PFAM:PF00005,PFAM:PF01061,PFAM:PF08370,PROFILE:PS50893,SMART:SM00382,SwissProt:Q0JLC5,SwissProt:Q76CU2,SwissProt:Q8GU89,TAIR:AT1G15520.1,TAIR:AT1G66950.1,TAIR:AT2G36380.1,TrEMBL:D7SUM9,TrEMBL:H6WS93,TrEMBL:H6WS94;Derives_from=GSCOCT00019562001;Name=Cc11_g01470;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0016020,GO:0016887,GO:0017111,CC_EC_number:3.6.3.28,CC_EC_number:3.6.3.28,PRODUCT:Pleiotropic drug resistance protein 1,CC_functional_completeness:complete,CC_gene:PDR1,CC_gene:PDR4,CC_gene:PDR3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019562001~ Pleiotropic drug resistance protein 1~ PDR1~ complete;original_location=join(814763..815088%2C815369..815489%2C815572..815660%2C815754..815838%2C815929..816088%2C816179..816255%2C816384..816437%2C816531..816621%2C816885..817186%2C817274..817555%2C817680..817996%2C818098..818258%2C818370..818473%2C818587..818743%2C818842..818949%2C819026..819171%2C819330..819662%2C819760..820050%2C820134..820217%2C820323..820456%2C820677..820904%2C821023..821194%2C821363..821617%2C821724..821984);owner=coffea | |
| 55209 chr11 manual_curation exon 5120241 5120566 . - . Parent=GSCOCT00019562001 | |
| 55210 chr11 manual_curation exon 5119840 5119960 . - . Parent=GSCOCT00019562001 | |
| 55211 chr11 manual_curation exon 5119669 5119757 . - . Parent=GSCOCT00019562001 | |
| 55212 chr11 manual_curation exon 5119491 5119575 . - . Parent=GSCOCT00019562001 | |
| 55213 chr11 manual_curation exon 5119241 5119400 . - . Parent=GSCOCT00019562001 | |
| 55214 chr11 manual_curation exon 5119074 5119150 . - . Parent=GSCOCT00019562001 | |
| 55215 chr11 manual_curation exon 5118892 5118945 . - . Parent=GSCOCT00019562001 | |
| 55216 chr11 manual_curation exon 5118708 5118798 . - . Parent=GSCOCT00019562001 | |
| 55217 chr11 manual_curation exon 5118143 5118444 . - . Parent=GSCOCT00019562001 | |
| 55218 chr11 manual_curation exon 5117774 5118055 . - . Parent=GSCOCT00019562001 | |
| 55219 chr11 manual_curation exon 5117333 5117649 . - . Parent=GSCOCT00019562001 | |
| 55220 chr11 manual_curation exon 5117071 5117231 . - . Parent=GSCOCT00019562001 | |
| 55221 chr11 manual_curation exon 5116856 5116959 . - . Parent=GSCOCT00019562001 | |
| 55222 chr11 manual_curation exon 5116586 5116742 . - . Parent=GSCOCT00019562001 | |
| 55223 chr11 manual_curation exon 5116380 5116487 . - . Parent=GSCOCT00019562001 | |
| 55224 chr11 manual_curation exon 5116158 5116303 . - . Parent=GSCOCT00019562001 | |
| 55225 chr11 manual_curation exon 5115667 5115999 . - . Parent=GSCOCT00019562001 | |
| 55226 chr11 manual_curation exon 5115279 5115569 . - . Parent=GSCOCT00019562001 | |
| 55227 chr11 manual_curation exon 5115112 5115195 . - . Parent=GSCOCT00019562001 | |
| 55228 chr11 manual_curation exon 5114873 5115006 . - . Parent=GSCOCT00019562001 | |
| 55229 chr11 manual_curation exon 5114425 5114652 . - . Parent=GSCOCT00019562001 | |
| 55230 chr11 manual_curation exon 5114135 5114306 . - . Parent=GSCOCT00019562001 | |
| 55231 chr11 manual_curation exon 5113712 5113966 . - . Parent=GSCOCT00019562001 | |
| 55232 chr11 manual_curation exon 5113197 5113605 . - . Parent=GSCOCT00019562001 | |
| 55233 chr11 manual_curation CDS 5120241 5120566 . - 0 Parent=GSCOCT00019562001 | |
| 55234 chr11 manual_curation CDS 5119840 5119960 . - 2 Parent=GSCOCT00019562001 | |
| 55235 chr11 manual_curation CDS 5119669 5119757 . - 0 Parent=GSCOCT00019562001 | |
| 55236 chr11 manual_curation CDS 5119491 5119575 . - 2 Parent=GSCOCT00019562001 | |
| 55237 chr11 manual_curation CDS 5119241 5119400 . - 0 Parent=GSCOCT00019562001 | |
| 55238 chr11 manual_curation CDS 5119074 5119150 . - 1 Parent=GSCOCT00019562001 | |
| 55239 chr11 manual_curation CDS 5118892 5118945 . - 0 Parent=GSCOCT00019562001 | |
| 55240 chr11 manual_curation CDS 5118708 5118798 . - 0 Parent=GSCOCT00019562001 | |
| 55241 chr11 manual_curation CDS 5118143 5118444 . - 1 Parent=GSCOCT00019562001 | |
| 55242 chr11 manual_curation CDS 5117774 5118055 . - 0 Parent=GSCOCT00019562001 | |
| 55243 chr11 manual_curation CDS 5117333 5117649 . - 0 Parent=GSCOCT00019562001 | |
| 55244 chr11 manual_curation CDS 5117071 5117231 . - 2 Parent=GSCOCT00019562001 | |
| 55245 chr11 manual_curation CDS 5116856 5116959 . - 1 Parent=GSCOCT00019562001 | |
| 55246 chr11 manual_curation CDS 5116586 5116742 . - 0 Parent=GSCOCT00019562001 | |
| 55247 chr11 manual_curation CDS 5116380 5116487 . - 1 Parent=GSCOCT00019562001 | |
| 55248 chr11 manual_curation CDS 5116158 5116303 . - 1 Parent=GSCOCT00019562001 | |
| 55249 chr11 manual_curation CDS 5115667 5115999 . - 0 Parent=GSCOCT00019562001 | |
| 55250 chr11 manual_curation CDS 5115279 5115569 . - 0 Parent=GSCOCT00019562001 | |
| 55251 chr11 manual_curation CDS 5115112 5115195 . - 0 Parent=GSCOCT00019562001 | |
| 55252 chr11 manual_curation CDS 5114873 5115006 . - 0 Parent=GSCOCT00019562001 | |
| 55253 chr11 manual_curation CDS 5114425 5114652 . - 2 Parent=GSCOCT00019562001 | |
| 55254 chr11 manual_curation CDS 5114135 5114306 . - 2 Parent=GSCOCT00019562001 | |
| 55255 chr11 manual_curation CDS 5113712 5113966 . - 0 Parent=GSCOCT00019562001 | |
| 55256 chr11 manual_curation CDS 5113345 5113605 . - 0 Parent=GSCOCT00019562001 | |
| 55257 chr11 manual_curation gene 5131732 5139062 . - . ID=GSCOCG00019561001;Name=Cc11_g01480 | |
| 55258 chr11 manual_curation mRNA 5131732 5139062 . - . ID=GSCOCT00019561001;Parent=GSCOCG00019561001;Name=Cc11_g01480 | |
| 55259 chr11 manual_curation polypeptide 5131732 5139062 . - . ID=GSCOCP00019561001;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR013525,InterPro:IPR013581,PFAM:PF00005,PFAM:PF01061,PFAM:PF08370,PROFILE:PS50893,SMART:SM00382,SwissProt:Q0JLC5,SwissProt:Q76CU2,SwissProt:Q9M9E1,TAIR:AT1G15520.1,TAIR:AT1G66950.1,TAIR:AT2G36380.1,TrEMBL:D7SUM9,TrEMBL:H6WS93,TrEMBL:H6WS94;Derives_from=GSCOCT00019561001;Name=Cc11_g01480;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0016020,GO:0016887,GO:0017111,CC_EC_number:3.6.3.29,CC_EC_number:3.6.3.29,PRODUCT:Pleiotropic drug resistance protein 1,CC_functional_completeness:complete,CC_gene:PDR1,CC_gene:ABCG40,CC_gene:PDR3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019561001~ Pleiotropic drug resistance protein 1~ PDR1~ complete;original_location=join(796267..796586%2C796689..796809%2C796926..797014%2C797097..797181%2C797282..797441%2C797555..797631%2C797744..797797%2C797882..797972%2C798166..798467%2C798566..798847%2C798939..799255%2C799343..799503%2C799597..799700%2C799808..799964%2C800061..800172%2C800253..800412%2C800947..801279%2C801357..801647%2C801724..801807%2C801881..802014%2C802220..802447%2C802536..802707%2C802996..803250%2C803340..803597);owner=coffea | |
| 55260 chr11 manual_curation exon 5138743 5139062 . - . Parent=GSCOCT00019561001 | |
| 55261 chr11 manual_curation exon 5138520 5138640 . - . Parent=GSCOCT00019561001 | |
| 55262 chr11 manual_curation exon 5138315 5138403 . - . Parent=GSCOCT00019561001 | |
| 55263 chr11 manual_curation exon 5138148 5138232 . - . Parent=GSCOCT00019561001 | |
| 55264 chr11 manual_curation exon 5137888 5138047 . - . Parent=GSCOCT00019561001 | |
| 55265 chr11 manual_curation exon 5137698 5137774 . - . Parent=GSCOCT00019561001 | |
| 55266 chr11 manual_curation exon 5137532 5137585 . - . Parent=GSCOCT00019561001 | |
| 55267 chr11 manual_curation exon 5137357 5137447 . - . Parent=GSCOCT00019561001 | |
| 55268 chr11 manual_curation exon 5136862 5137163 . - . Parent=GSCOCT00019561001 | |
| 55269 chr11 manual_curation exon 5136482 5136763 . - . Parent=GSCOCT00019561001 | |
| 55270 chr11 manual_curation exon 5136074 5136390 . - . Parent=GSCOCT00019561001 | |
| 55271 chr11 manual_curation exon 5135826 5135986 . - . Parent=GSCOCT00019561001 | |
| 55272 chr11 manual_curation exon 5135629 5135732 . - . Parent=GSCOCT00019561001 | |
| 55273 chr11 manual_curation exon 5135365 5135521 . - . Parent=GSCOCT00019561001 | |
| 55274 chr11 manual_curation exon 5135157 5135268 . - . Parent=GSCOCT00019561001 | |
| 55275 chr11 manual_curation exon 5134917 5135076 . - . Parent=GSCOCT00019561001 | |
| 55276 chr11 manual_curation exon 5134050 5134382 . - . Parent=GSCOCT00019561001 | |
| 55277 chr11 manual_curation exon 5133682 5133972 . - . Parent=GSCOCT00019561001 | |
| 55278 chr11 manual_curation exon 5133522 5133605 . - . Parent=GSCOCT00019561001 | |
| 55279 chr11 manual_curation exon 5133315 5133448 . - . Parent=GSCOCT00019561001 | |
| 55280 chr11 manual_curation exon 5132882 5133109 . - . Parent=GSCOCT00019561001 | |
| 55281 chr11 manual_curation exon 5132622 5132793 . - . Parent=GSCOCT00019561001 | |
| 55282 chr11 manual_curation exon 5132079 5132333 . - . Parent=GSCOCT00019561001 | |
| 55283 chr11 manual_curation exon 5131732 5131989 . - . Parent=GSCOCT00019561001 | |
| 55284 chr11 manual_curation CDS 5138743 5139062 . - 0 Parent=GSCOCT00019561001 | |
| 55285 chr11 manual_curation CDS 5138520 5138640 . - 2 Parent=GSCOCT00019561001 | |
| 55286 chr11 manual_curation CDS 5138315 5138403 . - 0 Parent=GSCOCT00019561001 | |
| 55287 chr11 manual_curation CDS 5138148 5138232 . - 2 Parent=GSCOCT00019561001 | |
| 55288 chr11 manual_curation CDS 5137888 5138047 . - 0 Parent=GSCOCT00019561001 | |
| 55289 chr11 manual_curation CDS 5137698 5137774 . - 1 Parent=GSCOCT00019561001 | |
| 55290 chr11 manual_curation CDS 5137532 5137585 . - 0 Parent=GSCOCT00019561001 | |
| 55291 chr11 manual_curation CDS 5137357 5137447 . - 0 Parent=GSCOCT00019561001 | |
| 55292 chr11 manual_curation CDS 5136862 5137163 . - 1 Parent=GSCOCT00019561001 | |
| 55293 chr11 manual_curation CDS 5136482 5136763 . - 0 Parent=GSCOCT00019561001 | |
| 55294 chr11 manual_curation CDS 5136074 5136390 . - 0 Parent=GSCOCT00019561001 | |
| 55295 chr11 manual_curation CDS 5135826 5135986 . - 2 Parent=GSCOCT00019561001 | |
| 55296 chr11 manual_curation CDS 5135629 5135732 . - 1 Parent=GSCOCT00019561001 | |
| 55297 chr11 manual_curation CDS 5135365 5135521 . - 0 Parent=GSCOCT00019561001 | |
| 55298 chr11 manual_curation CDS 5135157 5135268 . - 1 Parent=GSCOCT00019561001 | |
| 55299 chr11 manual_curation CDS 5134917 5135076 . - 2 Parent=GSCOCT00019561001 | |
| 55300 chr11 manual_curation CDS 5134050 5134382 . - 0 Parent=GSCOCT00019561001 | |
| 55301 chr11 manual_curation CDS 5133682 5133972 . - 0 Parent=GSCOCT00019561001 | |
| 55302 chr11 manual_curation CDS 5133522 5133605 . - 0 Parent=GSCOCT00019561001 | |
| 55303 chr11 manual_curation CDS 5133315 5133448 . - 0 Parent=GSCOCT00019561001 | |
| 55304 chr11 manual_curation CDS 5132882 5133109 . - 2 Parent=GSCOCT00019561001 | |
| 55305 chr11 manual_curation CDS 5132622 5132793 . - 2 Parent=GSCOCT00019561001 | |
| 55306 chr11 manual_curation CDS 5132079 5132333 . - 0 Parent=GSCOCT00019561001 | |
| 55307 chr11 manual_curation CDS 5131732 5131989 . - 0 Parent=GSCOCT00019561001 | |
| 55308 chr11 manual_curation gene 5149563 5151046 . - . ID=GSCOCG00019560001;Name=Cc11_g01490 | |
| 55309 chr11 manual_curation mRNA 5149563 5151046 . - . ID=GSCOCT00019560001;Parent=GSCOCG00019560001;Name=Cc11_g01490 | |
| 55310 chr11 manual_curation polypeptide 5149563 5151046 . - . ID=GSCOCP00019560001;Dbxref=InterPro:IPR003480,PFAM:PF02458,SwissProt:Q8GSM7,SwissProt:Q9FI78,TAIR:AT3G23840.1,TAIR:AT4G13840.1,TAIR:AT4G29250.1,TrEMBL:B9RJZ8,TrEMBL:D7SUN0,TrEMBL:G7I6C6;Derives_from=GSCOCT00019560001;Name=Cc11_g01490;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase,CC_functional_completeness:complete,CC_gene:HCT;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019560001~ Putative Hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase~ HCT~ complete;original_location=join(784283..784699%2C784819..785766);owner=coffea | |
| 55311 chr11 manual_curation exon 5150630 5151046 . - . Parent=GSCOCT00019560001 | |
| 55312 chr11 manual_curation exon 5149563 5150510 . - . Parent=GSCOCT00019560001 | |
| 55313 chr11 manual_curation CDS 5150630 5151046 . - 0 Parent=GSCOCT00019560001 | |
| 55314 chr11 manual_curation CDS 5149563 5150510 . - 0 Parent=GSCOCT00019560001 | |
| 55315 chr11 manual_curation gene 5158146 5161894 . - . ID=GSCOCG00019559001;Name=Cc11_g01500 | |
| 55316 chr11 manual_curation mRNA 5158146 5161894 . - . ID=GSCOCT00019559001;Parent=GSCOCG00019559001;Name=Cc11_g01500 | |
| 55317 chr11 manual_curation polypeptide 5158146 5160143 . - . ID=GSCOCP00019559001;Dbxref=InterPro:IPR003340,PFAM:PF02362,PROFILE:PS50863,SwissProt:Q9FHH1,TAIR:AT5G57720.1,TAIR:AT5G66980.1,TrEMBL:A5AN63,TrEMBL:D7TGI7,TrEMBL:F6HQF8;Derives_from=GSCOCT00019559001;Name=Cc11_g01500;Ontology_term=CC_evidence_code:ISS,GO:0003677,CC_EC_number:missing_EC_number,PRODUCT:Putative B3 domain-containing protein At5g57720,CC_functional_completeness:fragment,CC_gene:At5g57720;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019559001~ Putative B3 domain-containing protein At5g57720~ At5g57720~ fragment;original_location=join(775186..775290%2C776476..776920%2C777026..777183);owner=coffea | |
| 55318 chr11 manual_curation exon 5161526 5161894 . - . Parent=GSCOCT00019559001 | |
| 55319 chr11 manual_curation exon 5160039 5161327 . - . Parent=GSCOCT00019559001 | |
| 55320 chr11 manual_curation exon 5158409 5158853 . - . Parent=GSCOCT00019559001 | |
| 55321 chr11 manual_curation exon 5158146 5158303 . - . Parent=GSCOCT00019559001 | |
| 55322 chr11 manual_curation CDS 5160039 5160143 . - 0 Parent=GSCOCT00019559001 | |
| 55323 chr11 manual_curation CDS 5158409 5158853 . - 0 Parent=GSCOCT00019559001 | |
| 55324 chr11 manual_curation CDS 5158146 5158303 . - 1 Parent=GSCOCT00019559001 | |
| 55325 chr11 manual_curation gene 5178073 5180472 . + . ID=GSCOCG00019558001;Name=Cc11_g01510 | |
| 55326 chr11 manual_curation mRNA 5178073 5180472 . + . ID=GSCOCT00019558001;Parent=GSCOCG00019558001;Name=Cc11_g01510 | |
| 55327 chr11 manual_curation polypeptide 5180260 5180472 . + . ID=GSCOCP00019558001;Derives_from=GSCOCT00019558001;Name=Cc11_g01510;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019558001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(754857..755069);owner=coffea | |
| 55328 chr11 manual_curation exon 5178073 5178939 . + . Parent=GSCOCT00019558001 | |
| 55329 chr11 manual_curation exon 5179739 5180472 . + . Parent=GSCOCT00019558001 | |
| 55330 chr11 manual_curation CDS 5180260 5180472 . + 0 Parent=GSCOCT00019558001 | |
| 55331 chr11 manual_curation gene 5195090 5196814 . + . ID=GSCOCG00019557001;Name=Cc11_g01520 | |
| 55332 chr11 manual_curation mRNA 5195090 5196814 . + . ID=GSCOCT00019557001;Parent=GSCOCG00019557001;Name=Cc11_g01520 | |
| 55333 chr11 manual_curation polypeptide 5195375 5195659 . + . ID=GSCOCP00019557001;Derives_from=GSCOCT00019557001;Name=Cc11_g01520;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019557001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(739822..739954%2C739670..739731));owner=coffea | |
| 55334 chr11 manual_curation exon 5195598 5196814 . + . Parent=GSCOCT00019557001 | |
| 55335 chr11 manual_curation exon 5195090 5195507 . + . Parent=GSCOCT00019557001 | |
| 55336 chr11 manual_curation CDS 5195598 5195659 . + 1 Parent=GSCOCT00019557001 | |
| 55337 chr11 manual_curation CDS 5195375 5195507 . + 0 Parent=GSCOCT00019557001 | |
| 55338 chr11 manual_curation gene 5198978 5199305 . + . ID=GSCOCG00019556001;Name=Cc11_g01530 | |
| 55339 chr11 manual_curation mRNA 5198978 5199305 . + . ID=GSCOCT00019556001;Parent=GSCOCG00019556001;Name=Cc11_g01530 | |
| 55340 chr11 manual_curation polypeptide 5198978 5199305 . + . ID=GSCOCP00019556001;Dbxref=InterPro:IPR000039,PANTHER:PTHR10934,SwissProt:O65729,SwissProt:P42791,SwissProt:Q940B0,TAIR:AT3G05590.1,TAIR:AT5G27850.1,TrEMBL:C6SYU5,TrEMBL:I1NB76;Derives_from=GSCOCT00019556001;Name=Cc11_g01530;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:RPL18C,CC_gene:RPL18B,CC_gene:RPL18;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019556001~ Putative uncharacterized protein~ RPL18C~ fragment;original_location=complement(join(736197..736351%2C736024..736141));owner=coffea | |
| 55341 chr11 manual_curation exon 5199188 5199305 . + . Parent=GSCOCT00019556001 | |
| 55342 chr11 manual_curation exon 5198978 5199132 . + . Parent=GSCOCT00019556001 | |
| 55343 chr11 manual_curation CDS 5199188 5199305 . + 2 Parent=GSCOCT00019556001 | |
| 55344 chr11 manual_curation CDS 5198978 5199132 . + 0 Parent=GSCOCT00019556001 | |
| 55345 chr11 manual_curation gene 5229480 5230685 . - . ID=GSCOCG00019554001;Name=Cc11_g01540 | |
| 55346 chr11 manual_curation mRNA 5229480 5230685 . - . ID=GSCOCT00019554001;Parent=GSCOCG00019554001;Name=Cc11_g01540 | |
| 55347 chr11 manual_curation polypeptide 5229552 5229782 . - . ID=GSCOCP00019554001;Derives_from=GSCOCT00019554001;Name=Cc11_g01540;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019554001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=705547..705777;owner=coffea | |
| 55348 chr11 manual_curation exon 5229480 5230685 . - . Parent=GSCOCT00019554001 | |
| 55349 chr11 manual_curation CDS 5229552 5229782 . - 0 Parent=GSCOCT00019554001 | |
| 55350 chr11 manual_curation gene 5240988 5243248 . + . ID=GSCOCG00019552001;Name=Cc11_g01550 | |
| 55351 chr11 manual_curation mRNA 5240988 5243248 . + . ID=GSCOCT00019552001;Parent=GSCOCG00019552001;Name=Cc11_g01550 | |
| 55352 chr11 manual_curation polypeptide 5240988 5243248 . + . ID=GSCOCP00019552001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:O64635,SwissProt:O64636,SwissProt:O64637,TAIR:AT2G45550.1,TAIR:AT2G45560.1,TAIR:AT3G61040.1,TrEMBL:B3EXG2,TrEMBL:F6HT36,TrEMBL:F6I332;Derives_from=GSCOCT00019552001;Name=Cc11_g01550;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.71,PRODUCT:Putative Cytochrome P450 76C4,CC_functional_completeness:complete,CC_gene:CYP76C4,CC_gene:CYP76C1,CC_gene:CYP76C2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019552001~ Putative Cytochrome P450 76C4~ CYP76C4~ complete;original_location=complement(join(693814..694341%2C693448..693720%2C692685..692700%2C692081..692523));owner=coffea | |
| 55353 chr11 manual_curation exon 5242806 5243248 . + . Parent=GSCOCT00019552001 | |
| 55354 chr11 manual_curation exon 5242629 5242644 . + . Parent=GSCOCT00019552001 | |
| 55355 chr11 manual_curation exon 5241609 5241881 . + . Parent=GSCOCT00019552001 | |
| 55356 chr11 manual_curation exon 5240988 5241515 . + . Parent=GSCOCT00019552001 | |
| 55357 chr11 manual_curation CDS 5242806 5243248 . + 1 Parent=GSCOCT00019552001 | |
| 55358 chr11 manual_curation CDS 5242629 5242644 . + 0 Parent=GSCOCT00019552001 | |
| 55359 chr11 manual_curation CDS 5241609 5241881 . + 0 Parent=GSCOCT00019552001 | |
| 55360 chr11 manual_curation CDS 5240988 5241515 . + 0 Parent=GSCOCT00019552001 | |
| 55361 chr11 manual_curation gene 5251956 5252871 . + . ID=GSCOCG00019550001;Name=Cc11_g01560 | |
| 55362 chr11 manual_curation mRNA 5251956 5252871 . + . ID=GSCOCT00019550001;Parent=GSCOCG00019550001;Name=Cc11_g01560 | |
| 55363 chr11 manual_curation polypeptide 5252004 5252497 . + . ID=GSCOCP00019550001;Derives_from=GSCOCT00019550001;Name=Cc11_g01560;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019550001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(683187..683325%2C683056..683095%2C682832..682898));owner=coffea | |
| 55364 chr11 manual_curation exon 5252431 5252871 . + . Parent=GSCOCT00019550001 | |
| 55365 chr11 manual_curation exon 5252234 5252273 . + . Parent=GSCOCT00019550001 | |
| 55366 chr11 manual_curation exon 5251956 5252142 . + . Parent=GSCOCT00019550001 | |
| 55367 chr11 manual_curation CDS 5252431 5252497 . + 2 Parent=GSCOCT00019550001 | |
| 55368 chr11 manual_curation CDS 5252234 5252273 . + 1 Parent=GSCOCT00019550001 | |
| 55369 chr11 manual_curation CDS 5252004 5252142 . + 0 Parent=GSCOCT00019550001 | |
| 55370 chr11 manual_curation gene 5259431 5259880 . + . ID=GSCOCG00019549001;Name=Cc11_g01570 | |
| 55371 chr11 manual_curation mRNA 5259431 5259880 . + . ID=GSCOCT00019549001;Parent=GSCOCG00019549001;Name=Cc11_g01570 | |
| 55372 chr11 manual_curation polypeptide 5259431 5259880 . + . ID=GSCOCP00019549001;Dbxref=TrEMBL:B9RJZ9,TrEMBL:B9RK00;Derives_from=GSCOCT00019549001;Name=Cc11_g01570;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019549001~ Putative uncharacterized protein~ unknown_gene~ modules;original_location=complement(675449..675898);owner=coffea | |
| 55373 chr11 manual_curation exon 5259431 5259880 . + . Parent=GSCOCT00019549001 | |
| 55374 chr11 manual_curation CDS 5259431 5259880 . + 0 Parent=GSCOCT00019549001 | |
| 55375 chr11 manual_curation gene 5272852 5273868 . + . ID=GSCOCG00019547001;Name=Cc11_g01580 | |
| 55376 chr11 manual_curation mRNA 5272852 5273868 . + . ID=GSCOCT00019547001;Parent=GSCOCG00019547001;Name=Cc11_g01580 | |
| 55377 chr11 manual_curation polypeptide 5273191 5273677 . + . ID=GSCOCP00019547001;Dbxref=TrEMBL:B9RJZ9,TrEMBL:B9RK00;Derives_from=GSCOCT00019547001;Name=Cc11_g01580;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019547001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=complement(join(661822..662138%2C661652..661712));owner=coffea | |
| 55378 chr11 manual_curation exon 5273617 5273868 . + . Parent=GSCOCT00019547001 | |
| 55379 chr11 manual_curation exon 5272852 5273507 . + . Parent=GSCOCT00019547001 | |
| 55380 chr11 manual_curation CDS 5273617 5273677 . + 2 Parent=GSCOCT00019547001 | |
| 55381 chr11 manual_curation CDS 5273191 5273507 . + 0 Parent=GSCOCT00019547001 | |
| 55382 chr11 manual_curation gene 5280354 5281403 . + . ID=GSCOCG00019544001;Name=Cc11_g01590 | |
| 55383 chr11 manual_curation mRNA 5280354 5281403 . + . ID=GSCOCT00019544001;Parent=GSCOCG00019544001;Name=Cc11_g01590 | |
| 55384 chr11 manual_curation polypeptide 5280354 5281403 . + . ID=GSCOCP00019544001;Dbxref=TrEMBL:B9RJZ9;Derives_from=GSCOCT00019544001;Name=Cc11_g01590;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019544001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=complement(join(654729..654975%2C653926..654011));owner=coffea | |
| 55385 chr11 manual_curation exon 5281318 5281403 . + . Parent=GSCOCT00019544001 | |
| 55386 chr11 manual_curation exon 5280354 5280600 . + . Parent=GSCOCT00019544001 | |
| 55387 chr11 manual_curation CDS 5281318 5281403 . + 1 Parent=GSCOCT00019544001 | |
| 55388 chr11 manual_curation CDS 5280354 5280600 . + 0 Parent=GSCOCT00019544001 | |
| 55389 chr11 manual_curation gene 5301116 5304806 . - . ID=GSCOCG00019542001;Name=Cc11_g01600 | |
| 55390 chr11 manual_curation mRNA 5301116 5304806 . - . ID=GSCOCT00019542001;Parent=GSCOCG00019542001;Name=Cc11_g01600 | |
| 55391 chr11 manual_curation polypeptide 5301116 5304806 . - . ID=GSCOCP00019542001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017441,InterPro:IPR020635,PFAM:PF00560,PFAM:PF07714,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:C0LGP4,SwissProt:C0LGT6,SwissProt:Q9SD62,TAIR:AT3G47090.1,TAIR:AT3G47570.1,TAIR:AT3G47580.1,TrEMBL:B9HLG3,TrEMBL:F6HCE1,TrEMBL:G7K5E6;Derives_from=GSCOCT00019542001;Name=Cc11_g01600;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570,CC_functional_completeness:complete,CC_gene:At3g47570,CC_gene:At3g47110,CC_gene:EFR;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019542001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570~ At3g47570~ complete;original_location=join(630523..631243%2C631844..633213%2C633761..634213);owner=coffea | |
| 55392 chr11 manual_curation exon 5304086 5304806 . - . Parent=GSCOCT00019542001 | |
| 55393 chr11 manual_curation exon 5302116 5303485 . - . Parent=GSCOCT00019542001 | |
| 55394 chr11 manual_curation exon 5301116 5301568 . - . Parent=GSCOCT00019542001 | |
| 55395 chr11 manual_curation CDS 5304086 5304806 . - 0 Parent=GSCOCT00019542001 | |
| 55396 chr11 manual_curation CDS 5302116 5303485 . - 1 Parent=GSCOCT00019542001 | |
| 55397 chr11 manual_curation CDS 5301116 5301568 . - 0 Parent=GSCOCT00019542001 | |
| 55398 chr11 manual_curation gene 5317375 5320316 . - . ID=GSCOCG00019541001;Name=Cc11_g01610 | |
| 55399 chr11 manual_curation mRNA 5317375 5320316 . - . ID=GSCOCT00019541001;Parent=GSCOCG00019541001;Name=Cc11_g01610 | |
| 55400 chr11 manual_curation polypeptide 5319040 5320316 . - . ID=GSCOCP00019541001;Dbxref=InterPro:IPR006076,PFAM:PF01266,TAIR:AT5G11330.1,TrEMBL:B9RK02,TrEMBL:F6H3T0,TrEMBL:G7I6C9;Derives_from=GSCOCT00019541001;Name=Cc11_g01610;Ontology_term=CC_evidence_code:ISS,GO:0016491,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019541001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=join(615013..615267%2C616248..616289);owner=coffea | |
| 55401 chr11 manual_curation exon 5318665 5318850 . - . Parent=GSCOCT00019541001 | |
| 55402 chr11 manual_curation exon 5317375 5318365 . - . Parent=GSCOCT00019541001 | |
| 55403 chr11 manual_curation exon 5320062 5320316 . - . Parent=GSCOCT00019541001 | |
| 55404 chr11 manual_curation exon 5318960 5319081 . - . Parent=GSCOCT00019541001 | |
| 55405 chr11 manual_curation CDS 5320062 5320316 . - 0 Parent=GSCOCT00019541001 | |
| 55406 chr11 manual_curation CDS 5319040 5319081 . - 0 Parent=GSCOCT00019541001 | |
| 55407 chr11 manual_curation gene 5320545 5323817 . - . ID=GSCOCG00019540001;Name=Cc11_g01620 | |
| 55408 chr11 manual_curation mRNA 5320545 5323817 . - . ID=GSCOCT00019540001;Parent=GSCOCG00019540001;Name=Cc11_g01620 | |
| 55409 chr11 manual_curation polypeptide 5320680 5323614 . - . ID=GSCOCP00019540001;Dbxref=InterPro:IPR002938,InterPro:IPR003042,InterPro:IPR006076,PFAM:PF01266,PFAM:PF01494,PRINTS:PR00420,SwissProt:P86491,TAIR:AT5G11330.1,TrEMBL:B9IKT1,TrEMBL:F6H3T0,TrEMBL:G7I6C9;Derives_from=GSCOCT00019540001;Name=Cc11_g01620;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0008152,GO:0016491,GO:0055114,CC_EC_number:missing_EC_number,PRODUCT:Putative 6-hydroxynicotinate 3-monooxygenase,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019540001~ Putative 6-hydroxynicotinate 3-monooxygenase~ unknown_gene~ complete;original_location=join(611715..611969%2C613004..613308%2C613405..613615%2C614140..614649);owner=coffea | |
| 55410 chr11 manual_curation exon 5323360 5323817 . - . Parent=GSCOCT00019540001 | |
| 55411 chr11 manual_curation exon 5322021 5322325 . - . Parent=GSCOCT00019540001 | |
| 55412 chr11 manual_curation exon 5321714 5321924 . - . Parent=GSCOCT00019540001 | |
| 55413 chr11 manual_curation exon 5320545 5321189 . - . Parent=GSCOCT00019540001 | |
| 55414 chr11 manual_curation CDS 5323360 5323614 . - 0 Parent=GSCOCT00019540001 | |
| 55415 chr11 manual_curation CDS 5322021 5322325 . - 0 Parent=GSCOCT00019540001 | |
| 55416 chr11 manual_curation CDS 5321714 5321924 . - 2 Parent=GSCOCT00019540001 | |
| 55417 chr11 manual_curation CDS 5320680 5321189 . - 0 Parent=GSCOCT00019540001 | |
| 55418 chr11 manual_curation gene 5328526 5331550 . - . ID=GSCOCG00019539001;Name=Cc11_g01630 | |
| 55419 chr11 manual_curation mRNA 5328526 5331550 . - . ID=GSCOCT00019539001;Parent=GSCOCG00019539001;Name=Cc11_g01630 | |
| 55420 chr11 manual_curation polypeptide 5328644 5331550 . - . ID=GSCOCP00019539001;Dbxref=InterPro:IPR005123,PFAM:PF03171,SwissProt:Q84MB3,SwissProt:Q9LTH7,SwissProt:Q9LTH8,TAIR:AT1G06620.1,TAIR:AT5G59530.1,TAIR:AT5G59540.1,TrEMBL:A5AYM1,TrEMBL:B9T2A7,TrEMBL:D7U2X5;Derives_from=GSCOCT00019539001;Name=Cc11_g01630;Ontology_term=CC_evidence_code:ISS,GO:0016491,CC_EC_number:1.14.11.20,PRODUCT:Putative 1-aminocyclopropane-1-carboxylate oxidase homolog 1,CC_functional_completeness:complete,CC_gene:At1g06620,CC_gene:At5g59530,CC_gene:At5g59540;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019539001~ Putative 1-aminocyclopropane-1-carboxylate oxidase homolog 1~ At1g06620~ complete;original_location=join(603779..604284%2C604706..604831%2C604900..605041%2C606144..606167%2C606446..606685);owner=coffea | |
| 55421 chr11 manual_curation exon 5331045 5331550 . - . Parent=GSCOCT00019539001 | |
| 55422 chr11 manual_curation exon 5330498 5330623 . - . Parent=GSCOCT00019539001 | |
| 55423 chr11 manual_curation exon 5330288 5330429 . - . Parent=GSCOCT00019539001 | |
| 55424 chr11 manual_curation exon 5329162 5329185 . - . Parent=GSCOCT00019539001 | |
| 55425 chr11 manual_curation exon 5328526 5328883 . - . Parent=GSCOCT00019539001 | |
| 55426 chr11 manual_curation CDS 5331045 5331550 . - 0 Parent=GSCOCT00019539001 | |
| 55427 chr11 manual_curation CDS 5330498 5330623 . - 2 Parent=GSCOCT00019539001 | |
| 55428 chr11 manual_curation CDS 5330288 5330429 . - 2 Parent=GSCOCT00019539001 | |
| 55429 chr11 manual_curation CDS 5329162 5329185 . - 0 Parent=GSCOCT00019539001 | |
| 55430 chr11 manual_curation CDS 5328644 5328883 . - 0 Parent=GSCOCT00019539001 | |
| 55431 chr11 manual_curation gene 5337401 5338949 . + . ID=GSCOCG00019538001;Name=Cc11_g01640 | |
| 55432 chr11 manual_curation mRNA 5337401 5338949 . + . ID=GSCOCT00019538001;Parent=GSCOCG00019538001;Name=Cc11_g01640 | |
| 55433 chr11 manual_curation polypeptide 5337401 5338949 . + . ID=GSCOCP00019538001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,SwissProt:Q9LMF1,SwissProt:Q9SK82,SwissProt:Q9ZWJ3,TAIR:AT1G22360.1,TAIR:AT1G22380.1,TAIR:AT1G22400.1,TrEMBL:B6EWX9,TrEMBL:F8WKW1,TrEMBL:I1LVX5;Derives_from=GSCOCT00019538001;Name=Cc11_g01640;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.210,PRODUCT:Putative UDP-glycosyltransferase 85A3,CC_functional_completeness:complete,CC_gene:UGT85A3,CC_gene:UGT85A1,CC_gene:UGT85A2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019538001~ Putative UDP-glycosyltransferase 85A3~ UGT85A3~ complete;original_location=complement(join(597456..597928%2C597202..597299%2C596627..597144%2C596380..596559));owner=coffea | |
| 55434 chr11 manual_curation exon 5338770 5338949 . + . Parent=GSCOCT00019538001 | |
| 55435 chr11 manual_curation exon 5338185 5338702 . + . Parent=GSCOCT00019538001 | |
| 55436 chr11 manual_curation exon 5338030 5338127 . + . Parent=GSCOCT00019538001 | |
| 55437 chr11 manual_curation exon 5337401 5337873 . + . Parent=GSCOCT00019538001 | |
| 55438 chr11 manual_curation CDS 5338770 5338949 . + 0 Parent=GSCOCT00019538001 | |
| 55439 chr11 manual_curation CDS 5338185 5338702 . + 1 Parent=GSCOCT00019538001 | |
| 55440 chr11 manual_curation CDS 5338030 5338127 . + 2 Parent=GSCOCT00019538001 | |
| 55441 chr11 manual_curation CDS 5337401 5337873 . + 0 Parent=GSCOCT00019538001 | |
| 55442 chr11 manual_curation gene 5342358 5345824 . + . ID=GSCOCG00019537001;Name=Cc11_g01650 | |
| 55443 chr11 manual_curation mRNA 5342358 5345824 . + . ID=GSCOCT00019537001;Parent=GSCOCG00019537001;Name=Cc11_g01650 | |
| 55444 chr11 manual_curation polypeptide 5342478 5345488 . + . ID=GSCOCP00019537001;Dbxref=GENE3D:G3DSA:3.40.630.30,InterPro:IPR000182,InterPro:IPR016181,InterPro:IPR022610,PFAM:PF00583,PROFILE:PS51186,SUPERFAMILY:SSF55729,SwissProt:Q5XGA9,SwissProt:Q6GP53,SwissProt:Q9NHD5,TAIR:AT5G11340.1,TrEMBL:A5BJF0,TrEMBL:B9H9R5,TrEMBL:B9IKT2;Derives_from=GSCOCT00019537001;Name=Cc11_g01650;Ontology_term=CC_evidence_code:ISS,GO:0008080,GO:0008152,CC_EC_number:missing_EC_number,PRODUCT:Probable N-acetyltransferase san,CC_functional_completeness:complete,CC_gene:san,CC_gene:naa50;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019537001~ Probable N-acetyltransferase san~ san~ complete;original_location=complement(join(592698..592851%2C590172..590294%2C589841..590052));owner=coffea | |
| 55445 chr11 manual_curation exon 5345277 5345824 . + . Parent=GSCOCT00019537001 | |
| 55446 chr11 manual_curation exon 5345035 5345157 . + . Parent=GSCOCT00019537001 | |
| 55447 chr11 manual_curation exon 5342358 5342631 . + . Parent=GSCOCT00019537001 | |
| 55448 chr11 manual_curation CDS 5345277 5345488 . + 1 Parent=GSCOCT00019537001 | |
| 55449 chr11 manual_curation CDS 5345035 5345157 . + 1 Parent=GSCOCT00019537001 | |
| 55450 chr11 manual_curation CDS 5342478 5342631 . + 0 Parent=GSCOCT00019537001 | |
| 55451 chr11 manual_curation gene 5346715 5349642 . - . ID=GSCOCG00019536001;Name=Cc11_g01660 | |
| 55452 chr11 manual_curation mRNA 5346715 5349642 . - . ID=GSCOCT00019536001;Parent=GSCOCG00019536001;Name=Cc11_g01660 | |
| 55453 chr11 manual_curation polypeptide 5346930 5349642 . - . ID=GSCOCP00019536001;Dbxref=TAIR:AT2G25605.1,TrEMBL:B9H9R6,TrEMBL:B9RK07,TrEMBL:D7SUM3;Derives_from=GSCOCT00019536001;Name=Cc11_g01660;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019536001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B Has 75 Blast hits to 75 proteins in 20 species: Archae - 2%3B Bacteria - 4%3B Metazoa - 0%3B Fungi - 0%3B Plants - 36%3B Viruses - 0%3B Other Eukaryotes - 33 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(585687..585811%2C586766..586808%2C586895..586987%2C587074..587136%2C587797..587892%2C588025..588102%2C588313..588399);owner=coffea | |
| 55454 chr11 manual_curation exon 5349518 5349642 . - . Parent=GSCOCT00019536001 | |
| 55455 chr11 manual_curation exon 5348521 5348563 . - . Parent=GSCOCT00019536001 | |
| 55456 chr11 manual_curation exon 5348342 5348434 . - . Parent=GSCOCT00019536001 | |
| 55457 chr11 manual_curation exon 5348193 5348255 . - . Parent=GSCOCT00019536001 | |
| 55458 chr11 manual_curation exon 5347437 5347532 . - . Parent=GSCOCT00019536001 | |
| 55459 chr11 manual_curation exon 5347227 5347304 . - . Parent=GSCOCT00019536001 | |
| 55460 chr11 manual_curation exon 5346715 5347016 . - . Parent=GSCOCT00019536001 | |
| 55461 chr11 manual_curation CDS 5349518 5349642 . - 0 Parent=GSCOCT00019536001 | |
| 55462 chr11 manual_curation CDS 5348521 5348563 . - 2 Parent=GSCOCT00019536001 | |
| 55463 chr11 manual_curation CDS 5348342 5348434 . - 0 Parent=GSCOCT00019536001 | |
| 55464 chr11 manual_curation CDS 5348193 5348255 . - 0 Parent=GSCOCT00019536001 | |
| 55465 chr11 manual_curation CDS 5347437 5347532 . - 0 Parent=GSCOCT00019536001 | |
| 55466 chr11 manual_curation CDS 5347227 5347304 . - 0 Parent=GSCOCT00019536001 | |
| 55467 chr11 manual_curation CDS 5346930 5347016 . - 0 Parent=GSCOCT00019536001 | |
| 55468 chr11 manual_curation gene 5380695 5394929 . + . ID=GSCOCG00019535001;Name=Cc11_g01670 | |
| 55469 chr11 manual_curation mRNA 5380695 5394929 . + . ID=GSCOCT00019535001;Parent=GSCOCG00019535001;Name=Cc11_g01670 | |
| 55470 chr11 manual_curation polypeptide 5380695 5394175 . + . ID=GSCOCP00019535001;Dbxref=InterPro:IPR005135,PFAM:PF03372,SUPERFAMILY:SSF56219,SwissProt:Q0WKY2,SwissProt:Q8VYU4,SwissProt:Q9LS39,TAIR:AT1G73875.1,TAIR:AT3G18500.3,TAIR:AT5G11350.1,TrEMBL:B9RK08,TrEMBL:D7M3P8,TrEMBL:D7SUM2;Derives_from=GSCOCT00019535001;Name=Cc11_g01670;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Carbon catabolite repressor protein 4 homolog 6,CC_functional_completeness:complete,CC_gene:CCR4-6,CC_gene:CCR4-3,CC_gene:CCR4-5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019535001~ Putative Carbon catabolite repressor protein 4 homolog 6~ CCR4-6~ complete;original_location=complement(join(554515..554634%2C553926..554388%2C552446..552612%2C550269..550334%2C549182..549234%2C547709..547790%2C547553..547599%2C546971..547052%2C546150..546242%2C545961..545993%2C545763..545851%2C545225..545667%2C544893..545128%2C544692..544777%2C543648..543732%2C541154..541276));owner=coffea | |
| 55471 chr11 manual_curation exon 5394053 5394929 . + . Parent=GSCOCT00019535001 | |
| 55472 chr11 manual_curation exon 5391597 5391681 . + . Parent=GSCOCT00019535001 | |
| 55473 chr11 manual_curation exon 5390552 5390637 . + . Parent=GSCOCT00019535001 | |
| 55474 chr11 manual_curation exon 5390201 5390436 . + . Parent=GSCOCT00019535001 | |
| 55475 chr11 manual_curation exon 5389662 5390104 . + . Parent=GSCOCT00019535001 | |
| 55476 chr11 manual_curation exon 5389478 5389566 . + . Parent=GSCOCT00019535001 | |
| 55477 chr11 manual_curation exon 5389336 5389368 . + . Parent=GSCOCT00019535001 | |
| 55478 chr11 manual_curation exon 5389087 5389179 . + . Parent=GSCOCT00019535001 | |
| 55479 chr11 manual_curation exon 5388277 5388358 . + . Parent=GSCOCT00019535001 | |
| 55480 chr11 manual_curation exon 5387730 5387776 . + . Parent=GSCOCT00019535001 | |
| 55481 chr11 manual_curation exon 5387539 5387620 . + . Parent=GSCOCT00019535001 | |
| 55482 chr11 manual_curation exon 5386095 5386147 . + . Parent=GSCOCT00019535001 | |
| 55483 chr11 manual_curation exon 5384995 5385060 . + . Parent=GSCOCT00019535001 | |
| 55484 chr11 manual_curation exon 5382717 5382883 . + . Parent=GSCOCT00019535001 | |
| 55485 chr11 manual_curation exon 5380941 5381403 . + . Parent=GSCOCT00019535001 | |
| 55486 chr11 manual_curation exon 5380695 5380814 . + . Parent=GSCOCT00019535001 | |
| 55487 chr11 manual_curation CDS 5394053 5394175 . + 0 Parent=GSCOCT00019535001 | |
| 55488 chr11 manual_curation CDS 5391597 5391681 . + 2 Parent=GSCOCT00019535001 | |
| 55489 chr11 manual_curation CDS 5390552 5390637 . + 0 Parent=GSCOCT00019535001 | |
| 55490 chr11 manual_curation CDS 5390201 5390436 . + 1 Parent=GSCOCT00019535001 | |
| 55491 chr11 manual_curation CDS 5389662 5390104 . + 2 Parent=GSCOCT00019535001 | |
| 55492 chr11 manual_curation CDS 5389478 5389566 . + 0 Parent=GSCOCT00019535001 | |
| 55493 chr11 manual_curation CDS 5389336 5389368 . + 0 Parent=GSCOCT00019535001 | |
| 55494 chr11 manual_curation CDS 5389087 5389179 . + 0 Parent=GSCOCT00019535001 | |
| 55495 chr11 manual_curation CDS 5388277 5388358 . + 2 Parent=GSCOCT00019535001 | |
| 55496 chr11 manual_curation CDS 5387730 5387776 . + 0 Parent=GSCOCT00019535001 | |
| 55497 chr11 manual_curation CDS 5387539 5387620 . + 2 Parent=GSCOCT00019535001 | |
| 55498 chr11 manual_curation CDS 5386095 5386147 . + 0 Parent=GSCOCT00019535001 | |
| 55499 chr11 manual_curation CDS 5384995 5385060 . + 0 Parent=GSCOCT00019535001 | |
| 55500 chr11 manual_curation CDS 5382717 5382883 . + 1 Parent=GSCOCT00019535001 | |
| 55501 chr11 manual_curation CDS 5380941 5381403 . + 0 Parent=GSCOCT00019535001 | |
| 55502 chr11 manual_curation CDS 5380695 5380814 . + 0 Parent=GSCOCT00019535001 | |
| 55503 chr11 manual_curation gene 5408911 5411559 . + . ID=GSCOCG00019534001;Name=Cc11_g01680 | |
| 55504 chr11 manual_curation mRNA 5408911 5411559 . + . ID=GSCOCT00019534001;Parent=GSCOCG00019534001;Name=Cc11_g01680 | |
| 55505 chr11 manual_curation polypeptide 5409534 5411069 . + . ID=GSCOCP00019534001;Dbxref=GENE3D:G3DSA:3.40.47.10,InterPro:IPR012392,InterPro:IPR013601,InterPro:IPR013747,InterPro:IPR016038,InterPro:IPR016039,PFAM:PF08392,PFAM:PF08541,PIR:PIRSF036417,SUPERFAMILY:SSF53901,SwissProt:O48780,SwissProt:Q5XEP9,SwissProt:Q9FG87,TAIR:AT1G04220.1,TAIR:AT2G26640.1,TAIR:AT5G43760.1,TrEMBL:B9H9R8,TrEMBL:B9IKT4,TrEMBL:F6HH63;Derives_from=GSCOCT00019534001;Name=Cc11_g01680;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0006633,GO:0008152,GO:0008610,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:3-ketoacyl-CoA synthase 11,CC_functional_completeness:complete,CC_gene:KCS11,CC_gene:KCS17,CC_gene:KCS19;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019534001~ 3-ketoacyl-CoA synthase 11~ KCS11~ complete;original_location=complement(524260..525795);owner=coffea | |
| 55506 chr11 manual_curation exon 5408911 5408997 . + . Parent=GSCOCT00019534001 | |
| 55507 chr11 manual_curation exon 5409219 5411559 . + . Parent=GSCOCT00019534001 | |
| 55508 chr11 manual_curation CDS 5409534 5411069 . + 0 Parent=GSCOCT00019534001 | |
| 55509 chr11 manual_curation gene 5441297 5441942 . - . ID=GSCOCG00019532001;Name=Cc11_g01690 | |
| 55510 chr11 manual_curation mRNA 5441297 5441942 . - . ID=GSCOCT00019532001;Parent=GSCOCG00019532001;Name=Cc11_g01690 | |
| 55511 chr11 manual_curation polypeptide 5441297 5441841 . - . ID=GSCOCP00019532001;Dbxref=InterPro:IPR005132,InterPro:IPR007112,InterPro:IPR009009,PFAM:PF03330,PROFILE:PS50842,SUPERFAMILY:SSF50685,SwissProt:Q9ZP41,TAIR:AT2G18660.1,TrEMBL:B9IKT6,TrEMBL:C6SYD7,TrEMBL:I1K8Y4;Derives_from=GSCOCT00019532001;Name=Cc11_g01690;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative EG45-like domain containing protein,CC_functional_completeness:complete,CC_gene:CjBAp12;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019532001~ Putative EG45-like domain containing protein~ CjBAp12~ complete;original_location=join(493488..493602%2C493728..494032);owner=coffea | |
| 55512 chr11 manual_curation exon 5441727 5441942 . - . Parent=GSCOCT00019532001 | |
| 55513 chr11 manual_curation exon 5441297 5441601 . - . Parent=GSCOCT00019532001 | |
| 55514 chr11 manual_curation CDS 5441727 5441841 . - 0 Parent=GSCOCT00019532001 | |
| 55515 chr11 manual_curation CDS 5441297 5441601 . - 1 Parent=GSCOCT00019532001 | |
| 55516 chr11 manual_curation gene 5450728 5461709 . + . ID=GSCOCG00019530001;Name=Cc11_g01700 | |
| 55517 chr11 manual_curation mRNA 5450728 5461709 . + . ID=GSCOCT00019530001;Parent=GSCOCG00019530001;Name=Cc11_g01700 | |
| 55518 chr11 manual_curation polypeptide 5450879 5461220 . + . ID=GSCOCP00019530001;Dbxref=GENE3D:G3DSA:3.40.50.920,InterPro:IPR005475,InterPro:IPR005476,InterPro:IPR005477,InterPro:IPR009014,InterPro:IPR015941,InterPro:IPR020826,PFAM:PF02779,PFAM:PF02780,PROSITE:PS00802,SMART:SM00861,SUPERFAMILY:SSF52922,SwissProt:O22567,SwissProt:O78328,SwissProt:Q38854,TAIR:AT3G21500.2,TAIR:AT4G15560.1,TAIR:AT5G11380.1,TIGRFAMs:TIGR00204,TrEMBL:B9RK10,TrEMBL:D7SUP6,TrEMBL:H6VLG3;Derives_from=GSCOCT00019530001;Name=Cc11_g01700;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,GO:0008661,GO:0016114,CC_EC_number:2.2.1.7,PRODUCT:1-deoxy-D-xylulose-5-phosphate synthase 1%2C chloroplastic,CC_functional_completeness:complete,CC_gene:CLA1,CC_gene:TKT2,CC_gene:DXS;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019530001~ 1-deoxy-D-xylulose-5-phosphate synthase 1%2C chloroplastic~ CLA1~ complete;original_location=complement(join(484283..484450%2C482691..482795%2C482450..482614%2C481987..482137%2C481508..481776%2C480540..480828%2C478419..478684%2C476479..476757%2C475444..475728%2C474109..474258));owner=coffea | |
| 55519 chr11 manual_curation exon 5461071 5461709 . + . Parent=GSCOCT00019530001 | |
| 55520 chr11 manual_curation exon 5459601 5459885 . + . Parent=GSCOCT00019530001 | |
| 55521 chr11 manual_curation exon 5458572 5458850 . + . Parent=GSCOCT00019530001 | |
| 55522 chr11 manual_curation exon 5456645 5456910 . + . Parent=GSCOCT00019530001 | |
| 55523 chr11 manual_curation exon 5454501 5454789 . + . Parent=GSCOCT00019530001 | |
| 55524 chr11 manual_curation exon 5453553 5453821 . + . Parent=GSCOCT00019530001 | |
| 55525 chr11 manual_curation exon 5453192 5453342 . + . Parent=GSCOCT00019530001 | |
| 55526 chr11 manual_curation exon 5452715 5452879 . + . Parent=GSCOCT00019530001 | |
| 55527 chr11 manual_curation exon 5452534 5452638 . + . Parent=GSCOCT00019530001 | |
| 55528 chr11 manual_curation exon 5450728 5451046 . + . Parent=GSCOCT00019530001 | |
| 55529 chr11 manual_curation CDS 5461071 5461220 . + 0 Parent=GSCOCT00019530001 | |
| 55530 chr11 manual_curation CDS 5459601 5459885 . + 0 Parent=GSCOCT00019530001 | |
| 55531 chr11 manual_curation CDS 5458572 5458850 . + 0 Parent=GSCOCT00019530001 | |
| 55532 chr11 manual_curation CDS 5456645 5456910 . + 1 Parent=GSCOCT00019530001 | |
| 55533 chr11 manual_curation CDS 5454501 5454789 . + 0 Parent=GSCOCT00019530001 | |
| 55534 chr11 manual_curation CDS 5453553 5453821 . + 1 Parent=GSCOCT00019530001 | |
| 55535 chr11 manual_curation CDS 5453192 5453342 . + 0 Parent=GSCOCT00019530001 | |
| 55536 chr11 manual_curation CDS 5452715 5452879 . + 0 Parent=GSCOCT00019530001 | |
| 55537 chr11 manual_curation CDS 5452534 5452638 . + 0 Parent=GSCOCT00019530001 | |
| 55538 chr11 manual_curation CDS 5450879 5451046 . + 0 Parent=GSCOCT00019530001 | |
| 55539 chr11 manual_curation gene 5485053 5489619 . + . ID=GSCOCG00019529001;Name=Cc11_g01710 | |
| 55540 chr11 manual_curation mRNA 5485053 5489619 . + . ID=GSCOCT00019529001;Parent=GSCOCG00019529001;Name=Cc11_g01710 | |
| 55541 chr11 manual_curation polypeptide 5485053 5489385 . + . ID=GSCOCP00019529001;Dbxref=InterPro:IPR003020,InterPro:IPR011531,PANTHER:PTHR11453,PFAM:PF00955,SwissProt:Q3E954,SwissProt:Q9SSG5,SwissProt:Q9XI23,TAIR:AT1G15460.1,TAIR:AT1G74810.1,TAIR:AT5G25430.1,TrEMBL:B9GKZ0,TrEMBL:B9IKT8,TrEMBL:D7SUP7;Derives_from=GSCOCT00019529001;Name=Cc11_g01710;Ontology_term=CC_evidence_code:ISS,GO:0005452,GO:0006820,GO:0015380,GO:0016020,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Boron transporter 4,CC_functional_completeness:complete,CC_gene:BOR4,CC_gene:BOR5,CC_gene:BOR6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019529001~ Boron transporter 4~ BOR4~ complete;original_location=complement(join(450173..450276%2C449967..450049%2C449597..449789%2C449373..449511%2C449105..449270%2C448838..449004%2C447998..448171%2C447769..447864%2C447552..447668%2C447137..447453%2C446653..446935%2C445944..446096));owner=coffea | |
| 55542 chr11 manual_curation exon 5489233 5489619 . + . Parent=GSCOCT00019529001 | |
| 55543 chr11 manual_curation exon 5488394 5488676 . + . Parent=GSCOCT00019529001 | |
| 55544 chr11 manual_curation exon 5487876 5488192 . + . Parent=GSCOCT00019529001 | |
| 55545 chr11 manual_curation exon 5487661 5487777 . + . Parent=GSCOCT00019529001 | |
| 55546 chr11 manual_curation exon 5487465 5487560 . + . Parent=GSCOCT00019529001 | |
| 55547 chr11 manual_curation exon 5487158 5487331 . + . Parent=GSCOCT00019529001 | |
| 55548 chr11 manual_curation exon 5486325 5486491 . + . Parent=GSCOCT00019529001 | |
| 55549 chr11 manual_curation exon 5486059 5486224 . + . Parent=GSCOCT00019529001 | |
| 55550 chr11 manual_curation exon 5485818 5485956 . + . Parent=GSCOCT00019529001 | |
| 55551 chr11 manual_curation exon 5485540 5485732 . + . Parent=GSCOCT00019529001 | |
| 55552 chr11 manual_curation exon 5485280 5485362 . + . Parent=GSCOCT00019529001 | |
| 55553 chr11 manual_curation exon 5485053 5485156 . + . Parent=GSCOCT00019529001 | |
| 55554 chr11 manual_curation CDS 5489233 5489385 . + 0 Parent=GSCOCT00019529001 | |
| 55555 chr11 manual_curation CDS 5488394 5488676 . + 2 Parent=GSCOCT00019529001 | |
| 55556 chr11 manual_curation CDS 5487876 5488192 . + 0 Parent=GSCOCT00019529001 | |
| 55557 chr11 manual_curation CDS 5487661 5487777 . + 0 Parent=GSCOCT00019529001 | |
| 55558 chr11 manual_curation CDS 5487465 5487560 . + 0 Parent=GSCOCT00019529001 | |
| 55559 chr11 manual_curation CDS 5487158 5487331 . + 0 Parent=GSCOCT00019529001 | |
| 55560 chr11 manual_curation CDS 5486325 5486491 . + 1 Parent=GSCOCT00019529001 | |
| 55561 chr11 manual_curation CDS 5486059 5486224 . + 0 Parent=GSCOCT00019529001 | |
| 55562 chr11 manual_curation CDS 5485818 5485956 . + 2 Parent=GSCOCT00019529001 | |
| 55563 chr11 manual_curation CDS 5485540 5485732 . + 1 Parent=GSCOCT00019529001 | |
| 55564 chr11 manual_curation CDS 5485280 5485362 . + 2 Parent=GSCOCT00019529001 | |
| 55565 chr11 manual_curation CDS 5485053 5485156 . + 0 Parent=GSCOCT00019529001 | |
| 55566 chr11 manual_curation gene 5505864 5514957 . - . ID=GSCOCG00019528001;Name=Cc11_g01720 | |
| 55567 chr11 manual_curation mRNA 5505864 5514957 . - . ID=GSCOCT00019528001;Parent=GSCOCG00019528001;Name=Cc11_g01720 | |
| 55568 chr11 manual_curation polypeptide 5506525 5514660 . - . ID=GSCOCP00019528001;Dbxref=GENE3D:G3DSA:1.25.40.20,GENE3D:G3DSA:2.60.120.10,InterPro:IPR000595,InterPro:IPR002110,InterPro:IPR003938,InterPro:IPR005821,InterPro:IPR014710,InterPro:IPR018490,InterPro:IPR020683,InterPro:IPR021789,PFAM:PF00023,PFAM:PF00027,PFAM:PF00520,PFAM:PF11834,PRINTS:PR01463,PROFILE:PS50042,PROFILE:PS50088,PROFILE:PS50297,SMART:SM00100,SMART:SM00248,SUPERFAMILY:SSF48403,SUPERFAMILY:SSF51206,SwissProt:Q38998,SwissProt:Q8GXE6,SwissProt:Q9SCX5,TAIR:AT2G25600.1,TAIR:AT2G26650.1,TAIR:AT4G32500.1,TrEMBL:A5APS7,TrEMBL:E3PZ09,TrEMBL:Q5NT80;Derives_from=GSCOCT00019528001;Name=Cc11_g01720;Ontology_term=CC_evidence_code:ISS,GO:0005216,GO:0005249,GO:0006811,GO:0006813,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Potassium channel AKT1,CC_functional_completeness:complete,CC_gene:AKT1,CC_gene:AKT6,CC_gene:AKT5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019528001~ Potassium channel AKT1~ AKT1~ complete;original_location=join(420669..420895%2C422614..422979%2C423941..423998%2C424085..424399%2C424629..424874%2C425037..425135%2C425574..425606%2C425726..425911%2C426555..426749%2C426848..426923%2C427445..428032%2C428527..428804);owner=coffea | |
| 55569 chr11 manual_curation exon 5514434 5514957 . - . Parent=GSCOCT00019528001 | |
| 55570 chr11 manual_curation exon 5512350 5512715 . - . Parent=GSCOCT00019528001 | |
| 55571 chr11 manual_curation exon 5511331 5511388 . - . Parent=GSCOCT00019528001 | |
| 55572 chr11 manual_curation exon 5510930 5511244 . - . Parent=GSCOCT00019528001 | |
| 55573 chr11 manual_curation exon 5510455 5510700 . - . Parent=GSCOCT00019528001 | |
| 55574 chr11 manual_curation exon 5510194 5510292 . - . Parent=GSCOCT00019528001 | |
| 55575 chr11 manual_curation exon 5509723 5509755 . - . Parent=GSCOCT00019528001 | |
| 55576 chr11 manual_curation exon 5509418 5509603 . - . Parent=GSCOCT00019528001 | |
| 55577 chr11 manual_curation exon 5508580 5508774 . - . Parent=GSCOCT00019528001 | |
| 55578 chr11 manual_curation exon 5508406 5508481 . - . Parent=GSCOCT00019528001 | |
| 55579 chr11 manual_curation exon 5507297 5507884 . - . Parent=GSCOCT00019528001 | |
| 55580 chr11 manual_curation exon 5505864 5506802 . - . Parent=GSCOCT00019528001 | |
| 55581 chr11 manual_curation CDS 5514434 5514660 . - 0 Parent=GSCOCT00019528001 | |
| 55582 chr11 manual_curation CDS 5512350 5512715 . - 2 Parent=GSCOCT00019528001 | |
| 55583 chr11 manual_curation CDS 5511331 5511388 . - 2 Parent=GSCOCT00019528001 | |
| 55584 chr11 manual_curation CDS 5510930 5511244 . - 0 Parent=GSCOCT00019528001 | |
| 55585 chr11 manual_curation CDS 5510455 5510700 . - 0 Parent=GSCOCT00019528001 | |
| 55586 chr11 manual_curation CDS 5510194 5510292 . - 0 Parent=GSCOCT00019528001 | |
| 55587 chr11 manual_curation CDS 5509723 5509755 . - 0 Parent=GSCOCT00019528001 | |
| 55588 chr11 manual_curation CDS 5509418 5509603 . - 0 Parent=GSCOCT00019528001 | |
| 55589 chr11 manual_curation CDS 5508580 5508774 . - 0 Parent=GSCOCT00019528001 | |
| 55590 chr11 manual_curation CDS 5508406 5508481 . - 0 Parent=GSCOCT00019528001 | |
| 55591 chr11 manual_curation CDS 5507297 5507884 . - 1 Parent=GSCOCT00019528001 | |
| 55592 chr11 manual_curation CDS 5506525 5506802 . - 1 Parent=GSCOCT00019528001 | |
| 55593 chr11 manual_curation gene 5553288 5557238 . + . ID=GSCOCG00019524001;Name=Cc11_g01730 | |
| 55594 chr11 manual_curation mRNA 5553288 5557238 . + . ID=GSCOCT00019524001;Parent=GSCOCG00019524001;Name=Cc11_g01730 | |
| 55595 chr11 manual_curation polypeptide 5553310 5556937 . + . ID=GSCOCP00019524001;Dbxref=GENE3D:G3DSA:1.10.1090.10,InterPro:IPR003197,PANTHER:PTHR12022,PFAM:PF02271,PRODOM:PD008153,SUPERFAMILY:SSF81524,SwissProt:P48502,TAIR:AT4G32470.1,TAIR:AT5G25450.1,TrEMBL:D1MI91,TrEMBL:D7SUP9,TrEMBL:F8SUH7;Derives_from=GSCOCT00019524001;Name=Cc11_g01730;Ontology_term=CC_evidence_code:ISS,GO:0008121,CC_EC_number:missing_EC_number,PRODUCT:Cytochrome b-c1 complex subunit 7,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019524001~ Cytochrome b-c1 complex subunit 7~ unknown_gene~ complete;original_location=complement(join(381926..382019%2C381672..381829%2C378610..378657%2C378392..378460));owner=coffea | |
| 55596 chr11 manual_curation exon 5556869 5557238 . + . Parent=GSCOCT00019524001 | |
| 55597 chr11 manual_curation exon 5556672 5556719 . + . Parent=GSCOCT00019524001 | |
| 55598 chr11 manual_curation exon 5553500 5553657 . + . Parent=GSCOCT00019524001 | |
| 55599 chr11 manual_curation exon 5553288 5553403 . + . Parent=GSCOCT00019524001 | |
| 55600 chr11 manual_curation CDS 5556869 5556937 . + 0 Parent=GSCOCT00019524001 | |
| 55601 chr11 manual_curation CDS 5556672 5556719 . + 0 Parent=GSCOCT00019524001 | |
| 55602 chr11 manual_curation CDS 5553500 5553657 . + 1 Parent=GSCOCT00019524001 | |
| 55603 chr11 manual_curation CDS 5553310 5553403 . + 0 Parent=GSCOCT00019524001 | |
| 55604 chr11 manual_curation gene 5640822 5643309 . - . ID=GSCOCG00019523001;Name=Cc11_g01740 | |
| 55605 chr11 manual_curation mRNA 5640822 5643309 . - . ID=GSCOCT00019523001;Parent=GSCOCG00019523001;Name=Cc11_g01740 | |
| 55606 chr11 manual_curation polypeptide 5640822 5643309 . - . ID=GSCOCP00019523001;Dbxref=TAIR:AT1G43722.1,TAIR:AT5G41980.1,TrEMBL:A2ZTW0,TrEMBL:B9FC79,TrEMBL:Q7XLZ2;Derives_from=GSCOCT00019523001;Name=Cc11_g01740;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019523001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=join(292020..292307%2C292416..292527%2C292737..292829%2C293083..293092%2C293425..293535%2C293669..293771%2C293860..294507);owner=coffea | |
| 55607 chr11 manual_curation exon 5643022 5643309 . - . Parent=GSCOCT00019523001 | |
| 55608 chr11 manual_curation exon 5642802 5642913 . - . Parent=GSCOCT00019523001 | |
| 55609 chr11 manual_curation exon 5642500 5642592 . - . Parent=GSCOCT00019523001 | |
| 55610 chr11 manual_curation exon 5642237 5642246 . - . Parent=GSCOCT00019523001 | |
| 55611 chr11 manual_curation exon 5641794 5641904 . - . Parent=GSCOCT00019523001 | |
| 55612 chr11 manual_curation exon 5641558 5641660 . - . Parent=GSCOCT00019523001 | |
| 55613 chr11 manual_curation exon 5640822 5641469 . - . Parent=GSCOCT00019523001 | |
| 55614 chr11 manual_curation CDS 5643022 5643309 . - 0 Parent=GSCOCT00019523001 | |
| 55615 chr11 manual_curation CDS 5642802 5642913 . - 0 Parent=GSCOCT00019523001 | |
| 55616 chr11 manual_curation CDS 5642500 5642592 . - 1 Parent=GSCOCT00019523001 | |
| 55617 chr11 manual_curation CDS 5642237 5642246 . - 1 Parent=GSCOCT00019523001 | |
| 55618 chr11 manual_curation CDS 5641794 5641904 . - 2 Parent=GSCOCT00019523001 | |
| 55619 chr11 manual_curation CDS 5641558 5641660 . - 2 Parent=GSCOCT00019523001 | |
| 55620 chr11 manual_curation CDS 5640822 5641469 . - 0 Parent=GSCOCT00019523001 | |
| 55621 chr11 manual_curation gene 5645042 5653452 . - . ID=GSCOCG00019522001;Name=Cc11_g01750 | |
| 55622 chr11 manual_curation mRNA 5645042 5653452 . - . ID=GSCOCT00019522001;Parent=GSCOCG00019522001;Name=Cc11_g01750 | |
| 55623 chr11 manual_curation polypeptide 5645395 5653286 . - . ID=GSCOCP00019522001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:O64635,SwissProt:O64636,SwissProt:O64637,TAIR:AT2G45550.1,TAIR:AT2G45560.1,TAIR:AT2G45570.1,TrEMBL:B3EXG1,TrEMBL:Q2PF19,TrEMBL:Q6PLI3;Derives_from=GSCOCT00019522001;Name=Cc11_g01750;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.21,PRODUCT:Putative Cytochrome P450 76C4,CC_functional_completeness:complete,CC_gene:CYP76C4,CC_gene:CYP76C2,CC_gene:CYP76C1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019522001~ Putative Cytochrome P450 76C4~ CYP76C4~ complete;original_location=join(282043..282933%2C283376..283969%2C286066..286117%2C286297..286372%2C286988..287099%2C287900..288053%2C288485..288765%2C289216..289368%2C289803..289934);owner=coffea | |
| 55624 chr11 manual_curation exon 5652396 5653452 . - . Parent=GSCOCT00019522001 | |
| 55625 chr11 manual_curation exon 5651360 5651953 . - . Parent=GSCOCT00019522001 | |
| 55626 chr11 manual_curation exon 5649212 5649263 . - . Parent=GSCOCT00019522001 | |
| 55627 chr11 manual_curation exon 5648957 5649032 . - . Parent=GSCOCT00019522001 | |
| 55628 chr11 manual_curation exon 5648230 5648341 . - . Parent=GSCOCT00019522001 | |
| 55629 chr11 manual_curation exon 5647276 5647429 . - . Parent=GSCOCT00019522001 | |
| 55630 chr11 manual_curation exon 5646564 5646844 . - . Parent=GSCOCT00019522001 | |
| 55631 chr11 manual_curation exon 5645961 5646113 . - . Parent=GSCOCT00019522001 | |
| 55632 chr11 manual_curation exon 5645042 5645526 . - . Parent=GSCOCT00019522001 | |
| 55633 chr11 manual_curation CDS 5652396 5653286 . - 0 Parent=GSCOCT00019522001 | |
| 55634 chr11 manual_curation CDS 5651360 5651953 . - 0 Parent=GSCOCT00019522001 | |
| 55635 chr11 manual_curation CDS 5649212 5649263 . - 0 Parent=GSCOCT00019522001 | |
| 55636 chr11 manual_curation CDS 5648957 5649032 . - 1 Parent=GSCOCT00019522001 | |
| 55637 chr11 manual_curation CDS 5648230 5648341 . - 2 Parent=GSCOCT00019522001 | |
| 55638 chr11 manual_curation CDS 5647276 5647429 . - 0 Parent=GSCOCT00019522001 | |
| 55639 chr11 manual_curation CDS 5646564 5646844 . - 1 Parent=GSCOCT00019522001 | |
| 55640 chr11 manual_curation CDS 5645961 5646113 . - 0 Parent=GSCOCT00019522001 | |
| 55641 chr11 manual_curation CDS 5645395 5645526 . - 0 Parent=GSCOCT00019522001 | |
| 55642 chr11 manual_curation gene 5672203 5676313 . + . ID=GSCOCG00019521001;Name=Cc11_g01760 | |
| 55643 chr11 manual_curation mRNA 5672203 5676313 . + . ID=GSCOCT00019521001;Parent=GSCOCG00019521001;Name=Cc11_g01760 | |
| 55644 chr11 manual_curation polypeptide 5672321 5676121 . + . ID=GSCOCP00019521001;Dbxref=InterPro:IPR006946,InterPro:IPR008979,PFAM:PF04862,SUPERFAMILY:SSF49785,TAIR:AT4G32460.1,TAIR:AT5G11420.1,TAIR:AT5G25460.1,TrEMBL:B9HA13,TrEMBL:F6H3T7,TrEMBL:O24329;Derives_from=GSCOCT00019521001;Name=Cc11_g01760;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function%2C DUF642,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019521001~ Protein of unknown function%2C DUF642~ unknown_gene~ complete;original_location=complement(join(262930..263008%2C260687..261184%2C259208..259746));owner=coffea | |
| 55645 chr11 manual_curation exon 5675583 5676313 . + . Parent=GSCOCT00019521001 | |
| 55646 chr11 manual_curation exon 5674145 5674642 . + . Parent=GSCOCT00019521001 | |
| 55647 chr11 manual_curation exon 5672203 5672399 . + . Parent=GSCOCT00019521001 | |
| 55648 chr11 manual_curation CDS 5675583 5676121 . + 1 Parent=GSCOCT00019521001 | |
| 55649 chr11 manual_curation CDS 5674145 5674642 . + 1 Parent=GSCOCT00019521001 | |
| 55650 chr11 manual_curation CDS 5672321 5672399 . + 0 Parent=GSCOCT00019521001 | |
| 55651 chr11 manual_curation gene 5681908 5683503 . + . ID=GSCOCG00019519001;Name=Cc11_g01770 | |
| 55652 chr11 manual_curation mRNA 5681908 5683503 . + . ID=GSCOCT00019519001;Parent=GSCOCG00019519001;Name=Cc11_g01770 | |
| 55653 chr11 manual_curation polypeptide 5682967 5683503 . + . ID=GSCOCP00019519001;Dbxref=InterPro:IPR019191,PFAM:PF09811,SwissProt:Q8CH62,SwissProt:Q8WV07,TAIR:AT2G20830.2,TrEMBL:C6TDY5,TrEMBL:F6HII0,TrEMBL:I1N3S4;Derives_from=GSCOCT00019519001;Name=Cc11_g01770;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Oral cancer-overexpressed protein 1 homolog,CC_functional_completeness:modules,CC_gene:Oraov1,CC_gene:ORAOV1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019519001~ Putative Oral cancer-overexpressed protein 1 homolog~ Oraov1~ modules;original_location=complement(251826..252362);owner=coffea | |
| 55654 chr11 manual_curation exon 5681908 5682072 . + . Parent=GSCOCT00019519001 | |
| 55655 chr11 manual_curation exon 5682693 5683503 . + . Parent=GSCOCT00019519001 | |
| 55656 chr11 manual_curation CDS 5682967 5683503 . + 0 Parent=GSCOCT00019519001 | |
| 55657 chr11 manual_curation gene 5688524 5691207 . - . ID=GSCOCG00019517001;Name=Cc11_g01780 | |
| 55658 chr11 manual_curation mRNA 5688524 5691207 . - . ID=GSCOCT00019517001;Parent=GSCOCG00019517001;Name=Cc11_g01780 | |
| 55659 chr11 manual_curation polypeptide 5690673 5691113 . - . ID=GSCOCP00019517001;Dbxref=InterPro:IPR019191,PFAM:PF09811,SwissProt:Q8CH62,SwissProt:Q8WV07,TAIR:AT2G20830.2,TrEMBL:C6TDY5,TrEMBL:F6HII0,TrEMBL:I1N3S4;Derives_from=GSCOCT00019517001;Name=Cc11_g01780;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Oral cancer-overexpressed protein 1 homolog,CC_functional_completeness:complete,CC_gene:Oraov1,CC_gene:ORAOV1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019517001~ Putative Oral cancer-overexpressed protein 1 homolog~ Oraov1~ complete;original_location=244216..244656;owner=coffea | |
| 55660 chr11 manual_curation exon 5688524 5689494 . - . Parent=GSCOCT00019517001 | |
| 55661 chr11 manual_curation exon 5690672 5691207 . - . Parent=GSCOCT00019517001 | |
| 55662 chr11 manual_curation CDS 5690673 5691113 . - 0 Parent=GSCOCT00019517001 | |
| 55663 chr11 manual_curation gene 5693151 5695393 . + . ID=GSCOCG00019516001;Name=Cc11_g01790 | |
| 55664 chr11 manual_curation mRNA 5693151 5695393 . + . ID=GSCOCT00019516001;Parent=GSCOCG00019516001;Name=Cc11_g01790 | |
| 55665 chr11 manual_curation polypeptide 5693984 5695393 . + . ID=GSCOCP00019516001;Dbxref=InterPro:IPR005491,InterPro:IPR008395,InterPro:IPR014002,PFAM:PF03735,PFAM:PF05641,PROFILE:PS51138,SMART:SM00743,TAIR:AT2G25590.1,TAIR:AT4G32440.2,TAIR:AT5G20030.1,TrEMBL:B9HA19,TrEMBL:B9IKU5,TrEMBL:F6H3T9;Derives_from=GSCOCT00019516001;Name=Cc11_g01790;Ontology_term=CC_evidence_code:ISS,GO:0003723,CC_EC_number:missing_EC_number,PRODUCT:Putative Plant Tudor-like RNA-binding protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019516001~ Putative Plant Tudor-like RNA-binding protein~ unknown_gene~ complete;original_location=complement(join(240947..241345%2C239936..240790));owner=coffea | |
| 55666 chr11 manual_curation exon 5693151 5693348 . + . Parent=GSCOCT00019516001 | |
| 55667 chr11 manual_curation exon 5694539 5695393 . + . Parent=GSCOCT00019516001 | |
| 55668 chr11 manual_curation exon 5693947 5694382 . + . Parent=GSCOCT00019516001 | |
| 55669 chr11 manual_curation CDS 5694539 5695393 . + 0 Parent=GSCOCT00019516001 | |
| 55670 chr11 manual_curation CDS 5693984 5694382 . + 0 Parent=GSCOCT00019516001 | |
| 55671 chr11 manual_curation gene 5700975 5704095 . - . ID=GSCOCG00019512001;Name=Cc11_g01800 | |
| 55672 chr11 manual_curation mRNA 5700975 5704095 . - . ID=GSCOCT00019512001;Parent=GSCOCG00019512001;Name=Cc11_g01800 | |
| 55673 chr11 manual_curation polypeptide 5701859 5703976 . - . ID=GSCOCP00019512001;Dbxref=InterPro:IPR002041,InterPro:IPR003577,InterPro:IPR003578,InterPro:IPR003579,InterPro:IPR005225,InterPro:IPR013753,PFAM:PF00071,PRINTS:PR00627,PROFILE:PS51418,SMART:SM00173,SMART:SM00174,SMART:SM00175,SMART:SM00176,TAIR:AT4G39890.1,TAIR:AT5G55080.1,TIGRFAMs:TIGR00231;Derives_from=GSCOCT00019512001;Name=Cc11_g01800;Ontology_term=CC_evidence_code:ISS,GO:0003924,GO:0005515,GO:0005525,GO:0005622,GO:0006886,GO:0006913,GO:0007165,GO:0007264,GO:0015031,CC_EC_number:missing_EC_number,PRODUCT:ras-related nuclear protein 4,CC_functional_completeness:complete,CC_gene:RAN3,CC_gene:RAN-A1,CC_gene:RAN-B1,CC_gene:RAN1,CC_gene:RAN2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019512001~ ras-related nuclear protein 4~ RAN3~ complete;original_location=join(231353..231400%2C231508..231577%2C231963..232019%2C232154..232271%2C232708..232797%2C232892..233071%2C233193..233270%2C233401..233470);owner=coffea | |
| 55674 chr11 manual_curation exon 5703929 5704095 . - . Parent=GSCOCT00019512001 | |
| 55675 chr11 manual_curation exon 5703752 5703821 . - . Parent=GSCOCT00019512001 | |
| 55676 chr11 manual_curation exon 5703310 5703366 . - . Parent=GSCOCT00019512001 | |
| 55677 chr11 manual_curation exon 5703058 5703175 . - . Parent=GSCOCT00019512001 | |
| 55678 chr11 manual_curation exon 5702532 5702621 . - . Parent=GSCOCT00019512001 | |
| 55679 chr11 manual_curation exon 5702258 5702437 . - . Parent=GSCOCT00019512001 | |
| 55680 chr11 manual_curation exon 5702059 5702136 . - . Parent=GSCOCT00019512001 | |
| 55681 chr11 manual_curation exon 5700975 5701928 . - . Parent=GSCOCT00019512001 | |
| 55682 chr11 manual_curation CDS 5703929 5703976 . - 0 Parent=GSCOCT00019512001 | |
| 55683 chr11 manual_curation CDS 5703752 5703821 . - 0 Parent=GSCOCT00019512001 | |
| 55684 chr11 manual_curation CDS 5703310 5703366 . - 1 Parent=GSCOCT00019512001 | |
| 55685 chr11 manual_curation CDS 5703058 5703175 . - 1 Parent=GSCOCT00019512001 | |
| 55686 chr11 manual_curation CDS 5702532 5702621 . - 2 Parent=GSCOCT00019512001 | |
| 55687 chr11 manual_curation CDS 5702258 5702437 . - 2 Parent=GSCOCT00019512001 | |
| 55688 chr11 manual_curation CDS 5702059 5702136 . - 2 Parent=GSCOCT00019512001 | |
| 55689 chr11 manual_curation CDS 5701859 5701928 . - 2 Parent=GSCOCT00019512001 | |
| 55690 chr11 manual_curation gene 5727303 5729873 . - . ID=GSCOCG00019509001;Name=Cc11_g01810 | |
| 55691 chr11 manual_curation mRNA 5727303 5729873 . - . ID=GSCOCT00019509001;Parent=GSCOCG00019509001;Name=Cc11_g01810 | |
| 55692 chr11 manual_curation polypeptide 5727303 5729873 . - . ID=GSCOCP00019509001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:O80958,SwissProt:Q9FJE6,SwissProt:Q9SV46,TAIR:AT2G39230.1,TAIR:AT3G54980.1,TAIR:AT5G59900.1,TIGRFAMs:TIGR00756,TrEMBL:B9HA20,TrEMBL:B9RP84,TrEMBL:D7SUQ4;Derives_from=GSCOCT00019509001;Name=Cc11_g01810;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Pentatricopeptide repeat-containing protein At3g54980%2C mitochondrial,CC_functional_completeness:complete,CC_gene:At3g54980,CC_gene:LOJ,CC_gene:At5g59900;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019509001~ Putative Pentatricopeptide repeat-containing protein At3g54980%2C mitochondrial~ At3g54980~ complete;original_location=205456..208026;owner=coffea | |
| 55693 chr11 manual_curation exon 5727303 5729873 . - . Parent=GSCOCT00019509001 | |
| 55694 chr11 manual_curation CDS 5727303 5729873 . - 0 Parent=GSCOCT00019509001 | |
| 55695 chr11 manual_curation gene 5734981 5740866 . - . ID=GSCOCG00019508001;Name=Cc11_g01820 | |
| 55696 chr11 manual_curation mRNA 5734981 5740866 . - . ID=GSCOCT00019508001;Parent=GSCOCG00019508001;Name=Cc11_g01820 | |
| 55697 chr11 manual_curation polypeptide 5735397 5740866 . - . ID=GSCOCP00019508001;Dbxref=InterPro:IPR001525,PANTHER:PTHR10629,PFAM:PF00145,PRINTS:PR00105,SwissProt:O14717,SwissProt:O55055,SwissProt:Q4G073,TAIR:AT5G25480.1,TrEMBL:B9HA21,TrEMBL:F6H3U0,TrEMBL:Q8LER4;Derives_from=GSCOCT00019508001;Name=Cc11_g01820;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0006306,CC_EC_number:2.1.1.37,PRODUCT:Putative tRNA (cytosine(38)-C(5))-methyltransferase,CC_functional_completeness:complete,CC_gene:TRDMT1,CC_gene:Trdmt1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019508001~ Putative tRNA (cytosine(38)-C(5))-methyltransferase~ TRDMT1~ complete;original_location=join(194463..194543%2C194625..194735%2C195055..195148%2C195256..195374%2C195482..195604%2C196779..197112%2C197207..197301%2C198640..198705%2C198796..198860%2C199854..199932);owner=coffea | |
| 55698 chr11 manual_curation exon 5740786 5740866 . - . Parent=GSCOCT00019508001 | |
| 55699 chr11 manual_curation exon 5740594 5740704 . - . Parent=GSCOCT00019508001 | |
| 55700 chr11 manual_curation exon 5740181 5740274 . - . Parent=GSCOCT00019508001 | |
| 55701 chr11 manual_curation exon 5739955 5740073 . - . Parent=GSCOCT00019508001 | |
| 55702 chr11 manual_curation exon 5739725 5739847 . - . Parent=GSCOCT00019508001 | |
| 55703 chr11 manual_curation exon 5738217 5738550 . - . Parent=GSCOCT00019508001 | |
| 55704 chr11 manual_curation exon 5738028 5738122 . - . Parent=GSCOCT00019508001 | |
| 55705 chr11 manual_curation exon 5736624 5736689 . - . Parent=GSCOCT00019508001 | |
| 55706 chr11 manual_curation exon 5736469 5736533 . - . Parent=GSCOCT00019508001 | |
| 55707 chr11 manual_curation exon 5734981 5735475 . - . Parent=GSCOCT00019508001 | |
| 55708 chr11 manual_curation CDS 5740786 5740866 . - 0 Parent=GSCOCT00019508001 | |
| 55709 chr11 manual_curation CDS 5740594 5740704 . - 0 Parent=GSCOCT00019508001 | |
| 55710 chr11 manual_curation CDS 5740181 5740274 . - 0 Parent=GSCOCT00019508001 | |
| 55711 chr11 manual_curation CDS 5739955 5740073 . - 1 Parent=GSCOCT00019508001 | |
| 55712 chr11 manual_curation CDS 5739725 5739847 . - 0 Parent=GSCOCT00019508001 | |
| 55713 chr11 manual_curation CDS 5738217 5738550 . - 0 Parent=GSCOCT00019508001 | |
| 55714 chr11 manual_curation CDS 5738028 5738122 . - 1 Parent=GSCOCT00019508001 | |
| 55715 chr11 manual_curation CDS 5736624 5736689 . - 0 Parent=GSCOCT00019508001 | |
| 55716 chr11 manual_curation CDS 5736469 5736533 . - 0 Parent=GSCOCT00019508001 | |
| 55717 chr11 manual_curation CDS 5735397 5735475 . - 2 Parent=GSCOCT00019508001 | |
| 55718 chr11 manual_curation gene 5758894 5761940 . - . ID=GSCOCG00019506001;Name=Cc11_g01830 | |
| 55719 chr11 manual_curation mRNA 5758894 5761940 . - . ID=GSCOCT00019506001;Parent=GSCOCG00019506001;Name=Cc11_g01830 | |
| 55720 chr11 manual_curation polypeptide 5759620 5761815 . - . ID=GSCOCP00019506001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q680H3,SwissProt:Q8S8Q7,SwissProt:Q9SUU7,TAIR:AT2G25580.1,TAIR:AT2G34370.1,TAIR:AT4G32450.1,TIGRFAMs:TIGR00756,TrEMBL:A5AQE7,TrEMBL:F6H3U1,TrEMBL:Q6F2D0;Derives_from=GSCOCT00019506001;Name=Cc11_g01830;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Pentatricopeptide repeat-containing protein At2g34370%2C mitochondrial,CC_functional_completeness:modules,CC_gene:PCMP-H75,CC_gene:PCMP-H63,CC_gene:PCMP-H25;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019506001~ Putative Pentatricopeptide repeat-containing protein At2g34370%2C mitochondrial~ PCMP-H75~ modules;original_location=173514..175709;owner=coffea | |
| 55721 chr11 manual_curation exon 5758894 5761940 . - . Parent=GSCOCT00019506001 | |
| 55722 chr11 manual_curation CDS 5759620 5761815 . - 0 Parent=GSCOCT00019506001 | |
| 55723 chr11 manual_curation gene 5765155 5768989 . + . ID=GSCOCG00019505001;Name=Cc11_g01840 | |
| 55724 chr11 manual_curation mRNA 5765155 5768989 . + . ID=GSCOCT00019505001;Parent=GSCOCG00019505001;Name=Cc11_g01840 | |
| 55725 chr11 manual_curation polypeptide 5765155 5768989 . + . ID=GSCOCP00019505001;Dbxref=InterPro:IPR001905,PANTHER:PTHR11730,PFAM:PF00909,SUPERFAMILY:SSF111352,SwissProt:Q69T29,SwissProt:Q84KJ6,SwissProt:Q851M9,TAIR:AT2G38290.1,TAIR:AT3G24290.1,TAIR:AT3G24300.1,TIGRFAMs:TIGR00836,TrEMBL:A5AQE6,TrEMBL:B9RP82,TrEMBL:F6H3U2;Derives_from=GSCOCT00019505001;Name=Cc11_g01840;Ontology_term=CC_evidence_code:ISS,GO:0006810,GO:0008519,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Ammonium transporter 3 member 1,CC_functional_completeness:complete,CC_gene:AMT3-1,CC_gene:AMT3-3,CC_gene:AMT3-2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019505001~ Ammonium transporter 3 member 1~ AMT3-1~ complete;original_location=complement(join(169560..170174%2C168805..168905%2C167872..168185%2C166340..166881));owner=coffea | |
| 55726 chr11 manual_curation exon 5768448 5768989 . + . Parent=GSCOCT00019505001 | |
| 55727 chr11 manual_curation exon 5767144 5767457 . + . Parent=GSCOCT00019505001 | |
| 55728 chr11 manual_curation exon 5766424 5766524 . + . Parent=GSCOCT00019505001 | |
| 55729 chr11 manual_curation exon 5765155 5765769 . + . Parent=GSCOCT00019505001 | |
| 55730 chr11 manual_curation CDS 5768448 5768989 . + 1 Parent=GSCOCT00019505001 | |
| 55731 chr11 manual_curation CDS 5767144 5767457 . + 2 Parent=GSCOCT00019505001 | |
| 55732 chr11 manual_curation CDS 5766424 5766524 . + 0 Parent=GSCOCT00019505001 | |
| 55733 chr11 manual_curation CDS 5765155 5765769 . + 0 Parent=GSCOCT00019505001 | |
| 55734 chr11 manual_curation gene 5781094 5783194 . - . ID=GSCOCG00019503001;Name=Cc11_g01850 | |
| 55735 chr11 manual_curation mRNA 5781094 5783194 . - . ID=GSCOCT00019503001;Parent=GSCOCG00019503001;Name=Cc11_g01850 | |
| 55736 chr11 manual_curation polypeptide 5781094 5783194 . - . ID=GSCOCP00019503001;Dbxref=GENE3D:G3DSA:3.20.20.70,InterPro:IPR006062,InterPro:IPR011060,InterPro:IPR011858,InterPro:IPR013785,PANTHER:PTHR21169,PFAM:PF00977,SUPERFAMILY:SSF51366,SwissProt:O82782,SwissProt:Q10184,SwissProt:Q75AP1,TAIR:AT2G36230.1,TrEMBL:A5ASH5,TrEMBL:B9H375,TrEMBL:D7TJ73;Derives_from=GSCOCT00019503001;Name=Cc11_g01850;Ontology_term=CC_evidence_code:ISS,GO:0000105,GO:0003824,GO:0003949,GO:0008152,CC_EC_number:5.3.1.16,PRODUCT:1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:HIS6,CC_gene:SPAC3F10.09;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019503001~ 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase%2C chloroplastic~ HIS6~ fragment;original_location=join(152135..152201%2C152467..152623%2C153460..153508%2C154059..154235);owner=coffea | |
| 55737 chr11 manual_curation exon 5783128 5783194 . - . Parent=GSCOCT00019503001 | |
| 55738 chr11 manual_curation exon 5782706 5782862 . - . Parent=GSCOCT00019503001 | |
| 55739 chr11 manual_curation exon 5781821 5781869 . - . Parent=GSCOCT00019503001 | |
| 55740 chr11 manual_curation exon 5781094 5781270 . - . Parent=GSCOCT00019503001 | |
| 55741 chr11 manual_curation CDS 5783128 5783194 . - 0 Parent=GSCOCT00019503001 | |
| 55742 chr11 manual_curation CDS 5782706 5782862 . - 1 Parent=GSCOCT00019503001 | |
| 55743 chr11 manual_curation CDS 5781821 5781869 . - 2 Parent=GSCOCT00019503001 | |
| 55744 chr11 manual_curation CDS 5781094 5781270 . - 0 Parent=GSCOCT00019503001 | |
| 55745 chr11 manual_curation gene 5801050 5810254 . + . ID=GSCOCG00019500001;Name=Cc11_g01860 | |
| 55746 chr11 manual_curation mRNA 5801050 5810254 . + . ID=GSCOCT00019500001;Parent=GSCOCG00019500001;Name=Cc11_g01860 | |
| 55747 chr11 manual_curation polypeptide 5802347 5809651 . + . ID=GSCOCP00019500001;Dbxref=GENE3D:G3DSA:2.40.100.10,InterPro:IPR002130,InterPro:IPR015891,PFAM:PF00160,PRINTS:PR00153,PROFILE:PS50072,SUPERFAMILY:SSF50891,SwissProt:O55035,SwissProt:P0C1I7,SwissProt:P0C1I9,TAIR:AT3G55920.1,TAIR:AT3G63400.1,TAIR:AT4G32420.1,TrEMBL:D7MA49,TrEMBL:F6H3U3,TrEMBL:I1M9K2;Derives_from=GSCOCT00019500001;Name=Cc11_g01860;Ontology_term=CC_evidence_code:ISS,GO:0003755,GO:0006457,CC_EC_number:5.2.1.8,PRODUCT:Peptidyl-prolyl cis-trans isomerase cyp5,CC_functional_completeness:modules,CC_gene:Ppig,CC_gene:cyp5,CC_gene:cyp11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019500001~ Peptidyl-prolyl cis-trans isomerase cyp5~ Ppig~ modules;original_location=complement(join(132908..132982%2C132675..132729%2C131915..132003%2C131587..131611%2C130408..130446%2C129618..129735%2C129350..129477%2C128732..129089%2C128432..128532%2C127774..127984%2C126907..127686%2C126747..126812%2C125678..125987));owner=coffea | |
| 55748 chr11 manual_curation exon 5801050 5801187 . + . Parent=GSCOCT00019500001 | |
| 55749 chr11 manual_curation exon 5809342 5810254 . + . Parent=GSCOCT00019500001 | |
| 55750 chr11 manual_curation exon 5808517 5808582 . + . Parent=GSCOCT00019500001 | |
| 55751 chr11 manual_curation exon 5807643 5808422 . + . Parent=GSCOCT00019500001 | |
| 55752 chr11 manual_curation exon 5807345 5807555 . + . Parent=GSCOCT00019500001 | |
| 55753 chr11 manual_curation exon 5806797 5806897 . + . Parent=GSCOCT00019500001 | |
| 55754 chr11 manual_curation exon 5806240 5806597 . + . Parent=GSCOCT00019500001 | |
| 55755 chr11 manual_curation exon 5805852 5805979 . + . Parent=GSCOCT00019500001 | |
| 55756 chr11 manual_curation exon 5805594 5805711 . + . Parent=GSCOCT00019500001 | |
| 55757 chr11 manual_curation exon 5804883 5804921 . + . Parent=GSCOCT00019500001 | |
| 55758 chr11 manual_curation exon 5803718 5803742 . + . Parent=GSCOCT00019500001 | |
| 55759 chr11 manual_curation exon 5803326 5803414 . + . Parent=GSCOCT00019500001 | |
| 55760 chr11 manual_curation exon 5802600 5802654 . + . Parent=GSCOCT00019500001 | |
| 55761 chr11 manual_curation exon 5802285 5802421 . + . Parent=GSCOCT00019500001 | |
| 55762 chr11 manual_curation CDS 5809342 5809651 . + 2 Parent=GSCOCT00019500001 | |
| 55763 chr11 manual_curation CDS 5808517 5808582 . + 2 Parent=GSCOCT00019500001 | |
| 55764 chr11 manual_curation CDS 5807643 5808422 . + 2 Parent=GSCOCT00019500001 | |
| 55765 chr11 manual_curation CDS 5807345 5807555 . + 1 Parent=GSCOCT00019500001 | |
| 55766 chr11 manual_curation CDS 5806797 5806897 . + 2 Parent=GSCOCT00019500001 | |
| 55767 chr11 manual_curation CDS 5806240 5806597 . + 1 Parent=GSCOCT00019500001 | |
| 55768 chr11 manual_curation CDS 5805852 5805979 . + 2 Parent=GSCOCT00019500001 | |
| 55769 chr11 manual_curation CDS 5805594 5805711 . + 1 Parent=GSCOCT00019500001 | |
| 55770 chr11 manual_curation CDS 5804883 5804921 . + 1 Parent=GSCOCT00019500001 | |
| 55771 chr11 manual_curation CDS 5803718 5803742 . + 0 Parent=GSCOCT00019500001 | |
| 55772 chr11 manual_curation CDS 5803326 5803414 . + 1 Parent=GSCOCT00019500001 | |
| 55773 chr11 manual_curation CDS 5802600 5802654 . + 0 Parent=GSCOCT00019500001 | |
| 55774 chr11 manual_curation CDS 5802347 5802421 . + 0 Parent=GSCOCT00019500001 | |
| 55775 chr11 manual_curation gene 5820920 5827120 . + . ID=GSCOCG00019498001;Name=Cc11_g01870 | |
| 55776 chr11 manual_curation mRNA 5820920 5827120 . + . ID=GSCOCT00019498001;Parent=GSCOCG00019498001;Name=Cc11_g01870 | |
| 55777 chr11 manual_curation polypeptide 5820995 5826925 . + . ID=GSCOCP00019498001;Dbxref=InterPro:IPR003140,PFAM:PF02230,SwissProt:O95372,SwissProt:Q54T49,SwissProt:Q6CGL4,TAIR:AT1G52700.1,TAIR:AT3G15650.2,TAIR:AT5G20060.2,TrEMBL:B9HA25,TrEMBL:B9IKU8,TrEMBL:D7SUR2;Derives_from=GSCOCT00019498001;Name=Cc11_g01870;Ontology_term=CC_evidence_code:ISS,GO:0016787,CC_EC_number:3.1.1.1,PRODUCT:Putative Acyl-protein thioesterase 1 homolog 1,CC_functional_completeness:complete,CC_gene:DDB_G0282005,CC_gene:LYPLA2,CC_gene:YALI0A18337g;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019498001~ Putative Acyl-protein thioesterase 1 homolog 1~ DDB_G0282005~ complete;original_location=complement(join(114304..114334%2C114046..114160%2C113114..113150%2C112734..112803%2C112412..112516%2C111379..111529%2C111208..111290%2C108572..108665%2C108404..108485));owner=coffea | |
| 55778 chr11 manual_curation exon 5826844 5827120 . + . Parent=GSCOCT00019498001 | |
| 55779 chr11 manual_curation exon 5826664 5826757 . + . Parent=GSCOCT00019498001 | |
| 55780 chr11 manual_curation exon 5824039 5824121 . + . Parent=GSCOCT00019498001 | |
| 55781 chr11 manual_curation exon 5823800 5823950 . + . Parent=GSCOCT00019498001 | |
| 55782 chr11 manual_curation exon 5822813 5822917 . + . Parent=GSCOCT00019498001 | |
| 55783 chr11 manual_curation exon 5822526 5822595 . + . Parent=GSCOCT00019498001 | |
| 55784 chr11 manual_curation exon 5822179 5822215 . + . Parent=GSCOCT00019498001 | |
| 55785 chr11 manual_curation exon 5821169 5821283 . + . Parent=GSCOCT00019498001 | |
| 55786 chr11 manual_curation exon 5820920 5821025 . + . Parent=GSCOCT00019498001 | |
| 55787 chr11 manual_curation CDS 5826844 5826925 . + 2 Parent=GSCOCT00019498001 | |
| 55788 chr11 manual_curation CDS 5826664 5826757 . + 1 Parent=GSCOCT00019498001 | |
| 55789 chr11 manual_curation CDS 5824039 5824121 . + 2 Parent=GSCOCT00019498001 | |
| 55790 chr11 manual_curation CDS 5823800 5823950 . + 1 Parent=GSCOCT00019498001 | |
| 55791 chr11 manual_curation CDS 5822813 5822917 . + 1 Parent=GSCOCT00019498001 | |
| 55792 chr11 manual_curation CDS 5822526 5822595 . + 0 Parent=GSCOCT00019498001 | |
| 55793 chr11 manual_curation CDS 5822179 5822215 . + 2 Parent=GSCOCT00019498001 | |
| 55794 chr11 manual_curation CDS 5821169 5821283 . + 1 Parent=GSCOCT00019498001 | |
| 55795 chr11 manual_curation CDS 5820995 5821025 . + 0 Parent=GSCOCT00019498001 | |
| 55796 chr11 manual_curation gene 5855692 5856182 . - . ID=GSCOCG00019497001;Name=Cc11_g01880 | |
| 55797 chr11 manual_curation mRNA 5855692 5856182 . - . ID=GSCOCT00019497001;Parent=GSCOCG00019497001;Name=Cc11_g01880 | |
| 55798 chr11 manual_curation polypeptide 5855692 5856182 . - . ID=GSCOCP00019497001;Dbxref=TAIR:AT1G52700.1,TAIR:AT3G15650.2,TAIR:AT5G20060.2,TrEMBL:D7SUR2,TrEMBL:G7JB54,TrEMBL:I1JUF0;Derives_from=GSCOCT00019497001;Name=Cc11_g01880;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019497001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(79147..79218%2C79285..79469%2C79556..79637);owner=coffea | |
| 55799 chr11 manual_curation exon 5856111 5856182 . - . Parent=GSCOCT00019497001 | |
| 55800 chr11 manual_curation exon 5855860 5856044 . - . Parent=GSCOCT00019497001 | |
| 55801 chr11 manual_curation exon 5855692 5855773 . - . Parent=GSCOCT00019497001 | |
| 55802 chr11 manual_curation CDS 5856111 5856182 . - 0 Parent=GSCOCT00019497001 | |
| 55803 chr11 manual_curation CDS 5855860 5856044 . - 0 Parent=GSCOCT00019497001 | |
| 55804 chr11 manual_curation CDS 5855692 5855773 . - 2 Parent=GSCOCT00019497001 | |
| 55805 chr11 manual_curation gene 5867847 5875107 . - . ID=GSCOCG00019496001;Name=Cc11_g01890 | |
| 55806 chr11 manual_curation mRNA 5867847 5875107 . - . ID=GSCOCT00019496001;Parent=GSCOCG00019496001;Name=Cc11_g01890 | |
| 55807 chr11 manual_curation polypeptide 5868491 5874889 . - . ID=GSCOCP00019496001;Dbxref=InterPro:IPR005172,PFAM:PF03638,SwissProt:A1Z9E2,SwissProt:Q08CM4,SwissProt:Q95QD7,TAIR:AT3G22760.1,TAIR:AT3G22780.1,TAIR:AT4G14770.1,TrEMBL:B9RP78,TrEMBL:F6H304,TrEMBL:Q705X1;Derives_from=GSCOCT00019496001;Name=Cc11_g01890;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Tso1%2C putative,CC_functional_completeness:complete,CC_gene:mip120,CC_gene:lin-54,CC_gene:lin54;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019496001~ Tso1%2C putative~ mip120~ complete;original_location=join(60440..60523%2C61328..61482%2C61585..62146%2C62219..62368%2C62695..63332%2C63574..63618%2C63693..63879%2C63957..64055%2C64180..64246%2C65879..66041%2C66151..66838);owner=coffea | |
| 55808 chr11 manual_curation exon 5868259 5868356 . - . Parent=GSCOCT00019496001 | |
| 55809 chr11 manual_curation exon 5867847 5868177 . - . Parent=GSCOCT00019496001 | |
| 55810 chr11 manual_curation exon 5874806 5875107 . - . Parent=GSCOCT00019496001 | |
| 55811 chr11 manual_curation exon 5873847 5874001 . - . Parent=GSCOCT00019496001 | |
| 55812 chr11 manual_curation exon 5873183 5873744 . - . Parent=GSCOCT00019496001 | |
| 55813 chr11 manual_curation exon 5872961 5873110 . - . Parent=GSCOCT00019496001 | |
| 55814 chr11 manual_curation exon 5871997 5872634 . - . Parent=GSCOCT00019496001 | |
| 55815 chr11 manual_curation exon 5871711 5871755 . - . Parent=GSCOCT00019496001 | |
| 55816 chr11 manual_curation exon 5871450 5871636 . - . Parent=GSCOCT00019496001 | |
| 55817 chr11 manual_curation exon 5871274 5871372 . - . Parent=GSCOCT00019496001 | |
| 55818 chr11 manual_curation exon 5871083 5871149 . - . Parent=GSCOCT00019496001 | |
| 55819 chr11 manual_curation exon 5869288 5869450 . - . Parent=GSCOCT00019496001 | |
| 55820 chr11 manual_curation exon 5868475 5869178 . - . Parent=GSCOCT00019496001 | |
| 55821 chr11 manual_curation CDS 5874806 5874889 . - 0 Parent=GSCOCT00019496001 | |
| 55822 chr11 manual_curation CDS 5873847 5874001 . - 0 Parent=GSCOCT00019496001 | |
| 55823 chr11 manual_curation CDS 5873183 5873744 . - 2 Parent=GSCOCT00019496001 | |
| 55824 chr11 manual_curation CDS 5872961 5873110 . - 0 Parent=GSCOCT00019496001 | |
| 55825 chr11 manual_curation CDS 5871997 5872634 . - 0 Parent=GSCOCT00019496001 | |
| 55826 chr11 manual_curation CDS 5871711 5871755 . - 2 Parent=GSCOCT00019496001 | |
| 55827 chr11 manual_curation CDS 5871450 5871636 . - 2 Parent=GSCOCT00019496001 | |
| 55828 chr11 manual_curation CDS 5871274 5871372 . - 0 Parent=GSCOCT00019496001 | |
| 55829 chr11 manual_curation CDS 5871083 5871149 . - 0 Parent=GSCOCT00019496001 | |
| 55830 chr11 manual_curation CDS 5869288 5869450 . - 1 Parent=GSCOCT00019496001 | |
| 55831 chr11 manual_curation CDS 5868491 5869178 . - 2 Parent=GSCOCT00019496001 | |
| 55832 chr11 manual_curation gene 5886549 5887673 . + . ID=GSCOCG00019495001;Name=Cc11_g01900 | |
| 55833 chr11 manual_curation mRNA 5886549 5887673 . + . ID=GSCOCT00019495001;Parent=GSCOCG00019495001;Name=Cc11_g01900 | |
| 55834 chr11 manual_curation polypeptide 5886549 5887673 . + . ID=GSCOCP00019495001;Dbxref=InterPro:IPR001480,InterPro:IPR003609,PFAM:PF01453,PROFILE:PS50927,PROFILE:PS50948,SMART:SM00108,SUPERFAMILY:SSF51110,SwissProt:O64477,SwissProt:O64793,SwissProt:P0DH86,TAIR:AT1G67520.1,TAIR:AT2G19130.1,TAIR:AT5G18470.1,TrEMBL:B9N4Q7,TrEMBL:B9SEN3,TrEMBL:G7IRM2;Derives_from=GSCOCT00019495001;Name=Cc11_g01900;Ontology_term=CC_evidence_code:ISS,GO:0005529,CC_EC_number:missing_EC_number,PRODUCT:Putative G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520,CC_functional_completeness:fragment,CC_gene:At2g19130,CC_gene:At1g67520,CC_gene:SRK;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019495001~ Putative G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520~ At2g19130~ fragment;original_location=complement(join(48745..48780%2C47656..48678));owner=coffea | |
| 55835 chr11 manual_curation exon 5886651 5887673 . + . Parent=GSCOCT00019495001 | |
| 55836 chr11 manual_curation exon 5886549 5886584 . + . Parent=GSCOCT00019495001 | |
| 55837 chr11 manual_curation CDS 5886651 5887673 . + 0 Parent=GSCOCT00019495001 | |
| 55838 chr11 manual_curation CDS 5886549 5886584 . + 0 Parent=GSCOCT00019495001 | |
| 55839 chr11 manual_curation gene 5894965 5896479 . + . ID=GSCOCG00019494001;Name=Cc11_g01910 | |
| 55840 chr11 manual_curation mRNA 5894965 5896479 . + . ID=GSCOCT00019494001;Parent=GSCOCG00019494001;Name=Cc11_g01910 | |
| 55841 chr11 manual_curation polypeptide 5894965 5896479 . + . ID=GSCOCP00019494001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR020635,PFAM:PF07714,PROFILE:PS50011,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:O81906,SwissProt:Q9S972,SwissProt:Q9SXB8,TAIR:AT1G11330.2,TAIR:AT1G65800.1,TAIR:AT4G21390.1,TrEMBL:F6HH70,TrEMBL:I1KQR7,TrEMBL:I1NS88;Derives_from=GSCOCT00019494001;Name=Cc11_g01910;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330,CC_functional_completeness:fragment,CC_gene:At1g11330,CC_gene:B120,CC_gene:SD16;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019494001~ Putative G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330~ At1g11330~ fragment;original_location=complement(join(40245..40364%2C39956..40082%2C39703..39846%2C39609..39651%2C39347..39497%2C38850..39164));owner=coffea | |
| 55842 chr11 manual_curation exon 5896165 5896479 . + . Parent=GSCOCT00019494001 | |
| 55843 chr11 manual_curation exon 5895832 5895982 . + . Parent=GSCOCT00019494001 | |
| 55844 chr11 manual_curation exon 5895678 5895720 . + . Parent=GSCOCT00019494001 | |
| 55845 chr11 manual_curation exon 5895483 5895626 . + . Parent=GSCOCT00019494001 | |
| 55846 chr11 manual_curation exon 5895247 5895373 . + . Parent=GSCOCT00019494001 | |
| 55847 chr11 manual_curation exon 5894965 5895084 . + . Parent=GSCOCT00019494001 | |
| 55848 chr11 manual_curation CDS 5896165 5896479 . + 0 Parent=GSCOCT00019494001 | |
| 55849 chr11 manual_curation CDS 5895832 5895982 . + 2 Parent=GSCOCT00019494001 | |
| 55850 chr11 manual_curation CDS 5895678 5895720 . + 1 Parent=GSCOCT00019494001 | |
| 55851 chr11 manual_curation CDS 5895483 5895626 . + 1 Parent=GSCOCT00019494001 | |
| 55852 chr11 manual_curation CDS 5895247 5895373 . + 0 Parent=GSCOCT00019494001 | |
| 55853 chr11 manual_curation CDS 5894965 5895084 . + 0 Parent=GSCOCT00019494001 | |
| 55854 chr11 manual_curation gene 5903398 5904891 . + . ID=GSCOCG00019492001;Name=Cc11_g01920 | |
| 55855 chr11 manual_curation mRNA 5903398 5904891 . + . ID=GSCOCT00019492001;Parent=GSCOCG00019492001;Name=Cc11_g01920 | |
| 55856 chr11 manual_curation polypeptide 5903839 5904042 . + . ID=GSCOCP00019492001;Derives_from=GSCOCT00019492001;Name=Cc11_g01920;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019492001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(31287..31490);owner=coffea | |
| 55857 chr11 manual_curation exon 5903398 5904891 . + . Parent=GSCOCT00019492001 | |
| 55858 chr11 manual_curation CDS 5903839 5904042 . + 0 Parent=GSCOCT00019492001 | |
| 55859 chr11 manual_curation gene 5916889 5918180 . + . ID=GSCOCG00019491001;Name=Cc11_g01930 | |
| 55860 chr11 manual_curation mRNA 5916889 5918180 . + . ID=GSCOCT00019491001;Parent=GSCOCG00019491001;Name=Cc11_g01930 | |
| 55861 chr11 manual_curation polypeptide 5917154 5918180 . + . ID=GSCOCP00019491001;Dbxref=InterPro:IPR001876,PFAM:PF00641,PROFILE:PS50199,PROSITE:PS01358,SMART:SM00547,TAIR:AT2G26695.1,TAIR:AT3G15680.1,TAIR:AT5G25490.1,TrEMBL:B9GWD5,TrEMBL:B9IKV1,TrEMBL:B9RP77;Derives_from=GSCOCT00019491001;Name=Cc11_g01930;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Ran BP2/NZF zinc finger-like superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00019491001~ Ran BP2/NZF zinc finger-like superfamily protein~ unknown_gene~ complete;original_location=complement(join(17802..18175%2C17149..17239));owner=coffea | |
| 55862 chr11 manual_curation exon 5916889 5917003 . + . Parent=GSCOCT00019491001 | |
| 55863 chr11 manual_curation exon 5918090 5918180 . + . Parent=GSCOCT00019491001 | |
| 55864 chr11 manual_curation exon 5917146 5917527 . + . Parent=GSCOCT00019491001 | |
| 55865 chr11 manual_curation CDS 5918090 5918180 . + 2 Parent=GSCOCT00019491001 | |
| 55866 chr11 manual_curation CDS 5917154 5917527 . + 0 Parent=GSCOCT00019491001 | |
| 55867 chr11 manual_curation gene 5948225 5953792 . - . ID=GSCOCG00033049001;Name=Cc11_g01940 | |
| 55868 chr11 manual_curation mRNA 5948225 5953792 . - . ID=GSCOCT00033049001;Parent=GSCOCG00033049001;Name=Cc11_g01940 | |
| 55869 chr11 manual_curation polypeptide 5948225 5953792 . - . ID=GSCOCP00033049001;Dbxref=TAIR:AT3G54500.3,TrEMBL:B9RGC7,TrEMBL:F6HVG4,TrEMBL:I1JWG1;Derives_from=GSCOCT00033049001;Name=Cc11_g01940;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative FUNCTIONS IN,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033049001~ Putative FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: dentin sialophosphoprotein-related (TAIR:AT5G64170.1).~ unknown_gene~ fragment;original_location=join(2193956..2194052%2C2194194..2194350%2C2199241..2199523);owner=coffea | |
| 55870 chr11 manual_curation exon 5953696 5953792 . - . Parent=GSCOCT00033049001 | |
| 55871 chr11 manual_curation exon 5953398 5953554 . - . Parent=GSCOCT00033049001 | |
| 55872 chr11 manual_curation exon 5948225 5948507 . - . Parent=GSCOCT00033049001 | |
| 55873 chr11 manual_curation CDS 5953696 5953792 . - 0 Parent=GSCOCT00033049001 | |
| 55874 chr11 manual_curation CDS 5953398 5953554 . - 1 Parent=GSCOCT00033049001 | |
| 55875 chr11 manual_curation CDS 5948225 5948507 . - 2 Parent=GSCOCT00033049001 | |
| 55876 chr11 manual_curation gene 5966314 5969892 . + . ID=GSCOCG00033048001;Name=Cc11_g01950 | |
| 55877 chr11 manual_curation mRNA 5966314 5969892 . + . ID=GSCOCT00033048001;Parent=GSCOCG00033048001;Name=Cc11_g01950 | |
| 55878 chr11 manual_curation polypeptide 5966314 5969892 . + . ID=GSCOCP00033048001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:P0C8S1,SwissProt:Q9FJB5,SwissProt:Q9XIF0,TAIR:AT1G53350.1,TAIR:AT1G59780.1,TAIR:AT5G35450.1,TrEMBL:B9S717,TrEMBL:F6HCD4,TrEMBL:F6I153;Derives_from=GSCOCT00033048001;Name=Cc11_g01950;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable disease resistance RPP8-like protein 2,CC_functional_completeness:fragment,CC_gene:RPP8L2,CC_gene:RPP8L3,CC_gene:At1g59780;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033048001~ Putative Probable disease resistance RPP8-like protein 2~ RPP8L2~ fragment;original_location=complement(join(2181155..2181434%2C2179287..2179807%2C2177856..2179202));owner=coffea | |
| 55879 chr11 manual_curation exon 5968546 5969892 . + . Parent=GSCOCT00033048001 | |
| 55880 chr11 manual_curation exon 5967941 5968461 . + . Parent=GSCOCT00033048001 | |
| 55881 chr11 manual_curation exon 5966314 5966593 . + . Parent=GSCOCT00033048001 | |
| 55882 chr11 manual_curation CDS 5968546 5969892 . + 0 Parent=GSCOCT00033048001 | |
| 55883 chr11 manual_curation CDS 5967941 5968461 . + 1 Parent=GSCOCT00033048001 | |
| 55884 chr11 manual_curation CDS 5966314 5966593 . + 0 Parent=GSCOCT00033048001 | |
| 55885 chr11 manual_curation gene 5997105 5998893 . - . ID=GSCOCG00033047001;Name=Cc11_g01960 | |
| 55886 chr11 manual_curation mRNA 5997105 5998893 . - . ID=GSCOCT00033047001;Parent=GSCOCG00033047001;Name=Cc11_g01960 | |
| 55887 chr11 manual_curation polypeptide 5997294 5998893 . - . ID=GSCOCP00033047001;Derives_from=GSCOCT00033047001;Name=Cc11_g01960;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033047001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(2148855..2149380%2C2150312..2150454);owner=coffea | |
| 55888 chr11 manual_curation exon 5998368 5998893 . - . Parent=GSCOCT00033047001 | |
| 55889 chr11 manual_curation exon 5997105 5997436 . - . Parent=GSCOCT00033047001 | |
| 55890 chr11 manual_curation CDS 5998368 5998893 . - 0 Parent=GSCOCT00033047001 | |
| 55891 chr11 manual_curation CDS 5997294 5997436 . - 1 Parent=GSCOCT00033047001 | |
| 55892 chr11 manual_curation gene 6014491 6019743 . + . ID=GSCOCG00033046001;Name=Cc11_g01970 | |
| 55893 chr11 manual_curation mRNA 6014491 6019743 . + . ID=GSCOCT00033046001;Parent=GSCOCG00033046001;Name=Cc11_g01970 | |
| 55894 chr11 manual_curation polypeptide 6014836 6019743 . + . ID=GSCOCP00033046001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:P0DI16,SwissProt:Q8W474,SwissProt:Q9FJB5,TAIR:AT1G58390.1,TAIR:AT1G58807.1,TAIR:AT5G35450.1,TrEMBL:A5BY94,TrEMBL:B9S717,TrEMBL:G7IID2;Derives_from=GSCOCT00033046001;Name=Cc11_g01970;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable disease resistance protein At1g58390,CC_functional_completeness:complete,CC_gene:At1g58390,CC_gene:RPP8L3,CC_gene:RDL5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033046001~ Putative Probable disease resistance protein At1g58390~ At1g58390~ complete;original_location=complement(join(2131868..2132912%2C2129545..2131366%2C2128005..2128065));owner=coffea | |
| 55895 chr11 manual_curation exon 6019683 6019743 . + . Parent=GSCOCT00033046001 | |
| 55896 chr11 manual_curation exon 6016382 6018203 . + . Parent=GSCOCT00033046001 | |
| 55897 chr11 manual_curation exon 6014491 6015880 . + . Parent=GSCOCT00033046001 | |
| 55898 chr11 manual_curation CDS 6019683 6019743 . + 2 Parent=GSCOCT00033046001 | |
| 55899 chr11 manual_curation CDS 6016382 6018203 . + 1 Parent=GSCOCT00033046001 | |
| 55900 chr11 manual_curation CDS 6014836 6015880 . + 0 Parent=GSCOCT00033046001 | |
| 55901 chr11 manual_curation gene 6048310 6085884 . + . ID=GSCOCG00033044001;Name=Cc11_g01980 | |
| 55902 chr11 manual_curation mRNA 6048310 6085884 . + . ID=GSCOCT00033044001;Parent=GSCOCG00033044001;Name=Cc11_g01980 | |
| 55903 chr11 manual_curation polypeptide 6048310 6085884 . + . ID=GSCOCP00033044001;Dbxref=InterPro:IPR007828,PANTHER:PTHR12588,PFAM:PF05153,SwissProt:O82200,SwissProt:Q8L799,SwissProt:Q9FJU4,TAIR:AT1G14520.1,TAIR:AT2G19800.1,TAIR:AT5G56640.1,TrEMBL:C6T8W1,TrEMBL:I1KGG7,TrEMBL:I1KGG9;Derives_from=GSCOCT00033044001;Name=Cc11_g01980;Ontology_term=CC_evidence_code:ISS,GO:0005506,GO:0005737,GO:0019310,GO:0050113,GO:0055114,CC_EC_number:1.13.99.1,PRODUCT:Putative Inositol oxygenase,CC_functional_completeness:complete,CC_gene:MIOX1,CC_gene:MIOX5,CC_gene:MIOX2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033044001~ Putative Inositol oxygenase~ MIOX1~ complete;original_location=complement(join(2099269..2099438%2C2062839..2062957%2C2062690..2062742%2C2062486..2062608%2C2062335..2062404%2C2062169..2062247%2C2061970..2062051%2C2061864..2061905));owner=coffea | |
| 55904 chr11 manual_curation exon 6085843 6085884 . + . Parent=GSCOCT00033044001 | |
| 55905 chr11 manual_curation exon 6085697 6085778 . + . Parent=GSCOCT00033044001 | |
| 55906 chr11 manual_curation exon 6085501 6085579 . + . Parent=GSCOCT00033044001 | |
| 55907 chr11 manual_curation exon 6085344 6085413 . + . Parent=GSCOCT00033044001 | |
| 55908 chr11 manual_curation exon 6085140 6085262 . + . Parent=GSCOCT00033044001 | |
| 55909 chr11 manual_curation exon 6085006 6085058 . + . Parent=GSCOCT00033044001 | |
| 55910 chr11 manual_curation exon 6084791 6084909 . + . Parent=GSCOCT00033044001 | |
| 55911 chr11 manual_curation exon 6048310 6048479 . + . Parent=GSCOCT00033044001 | |
| 55912 chr11 manual_curation CDS 6085843 6085884 . + 0 Parent=GSCOCT00033044001 | |
| 55913 chr11 manual_curation CDS 6085697 6085778 . + 2 Parent=GSCOCT00033044001 | |
| 55914 chr11 manual_curation CDS 6085501 6085579 . + 1 Parent=GSCOCT00033044001 | |
| 55915 chr11 manual_curation CDS 6085344 6085413 . + 0 Parent=GSCOCT00033044001 | |
| 55916 chr11 manual_curation CDS 6085140 6085262 . + 0 Parent=GSCOCT00033044001 | |
| 55917 chr11 manual_curation CDS 6085006 6085058 . + 1 Parent=GSCOCT00033044001 | |
| 55918 chr11 manual_curation CDS 6084791 6084909 . + 2 Parent=GSCOCT00033044001 | |
| 55919 chr11 manual_curation CDS 6048310 6048479 . + 0 Parent=GSCOCT00033044001 | |
| 55920 chr11 manual_curation gene 6152653 6153126 . - . ID=GSCOCG00033042001;Name=Cc11_g01990 | |
| 55921 chr11 manual_curation mRNA 6152653 6153126 . - . ID=GSCOCT00033042001;Parent=GSCOCG00033042001;Name=Cc11_g01990 | |
| 55922 chr11 manual_curation polypeptide 6152653 6153126 . - . ID=GSCOCP00033042001;Dbxref=TAIR:AT1G01320.1,TAIR:AT1G15290.1,TAIR:AT4G28080.1,TrEMBL:A3A568,TrEMBL:Q0E2A9,TrEMBL:Q6EN40;Derives_from=GSCOCT00033042001;Name=Cc11_g01990;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033042001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(1994622..1994738%2C1994877..1995095);owner=coffea | |
| 55923 chr11 manual_curation exon 6153010 6153126 . - . Parent=GSCOCT00033042001 | |
| 55924 chr11 manual_curation exon 6152653 6152871 . - . Parent=GSCOCT00033042001 | |
| 55925 chr11 manual_curation CDS 6153010 6153126 . - 0 Parent=GSCOCT00033042001 | |
| 55926 chr11 manual_curation CDS 6152653 6152871 . - 0 Parent=GSCOCT00033042001 | |
| 55927 chr11 manual_curation gene 6198143 6200933 . + . ID=GSCOCG00033041001;Name=Cc11_g02000 | |
| 55928 chr11 manual_curation mRNA 6198143 6200933 . + . ID=GSCOCT00033041001;Parent=GSCOCG00033041001;Name=Cc11_g02000 | |
| 55929 chr11 manual_curation polypeptide 6198143 6200933 . + . ID=GSCOCP00033041001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:P0C8S1,SwissProt:Q8W474,SwissProt:Q9FJB5,TAIR:AT1G53350.1,TAIR:AT1G58390.1,TAIR:AT5G35450.1,TrEMBL:B9S717,TrEMBL:G0XZC6,TrEMBL:G7IID2;Derives_from=GSCOCT00033041001;Name=Cc11_g02000;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable disease resistance RPP8-like protein 2,CC_functional_completeness:complete,CC_gene:RPP8L2,CC_gene:At1g58390,CC_gene:RPP8L3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033041001~ Putative Probable disease resistance RPP8-like protein 2~ RPP8L2~ complete;original_location=complement(join(1948981..1949605%2C1947997..1948682%2C1947333..1947942%2C1946815..1947278));owner=coffea | |
| 55930 chr11 manual_curation exon 6200470 6200933 . + . Parent=GSCOCT00033041001 | |
| 55931 chr11 manual_curation exon 6199806 6200415 . + . Parent=GSCOCT00033041001 | |
| 55932 chr11 manual_curation exon 6199066 6199751 . + . Parent=GSCOCT00033041001 | |
| 55933 chr11 manual_curation exon 6198143 6198767 . + . Parent=GSCOCT00033041001 | |
| 55934 chr11 manual_curation CDS 6200470 6200933 . + 1 Parent=GSCOCT00033041001 | |
| 55935 chr11 manual_curation CDS 6199806 6200415 . + 0 Parent=GSCOCT00033041001 | |
| 55936 chr11 manual_curation CDS 6199066 6199751 . + 1 Parent=GSCOCT00033041001 | |
| 55937 chr11 manual_curation CDS 6198143 6198767 . + 0 Parent=GSCOCT00033041001 | |
| 55938 chr11 manual_curation gene 6202014 6202336 . - . ID=GSCOCG00033040001;Name=Cc11_g02010 | |
| 55939 chr11 manual_curation mRNA 6202014 6202336 . - . ID=GSCOCT00033040001;Parent=GSCOCG00033040001;Name=Cc11_g02010 | |
| 55940 chr11 manual_curation polypeptide 6202014 6202336 . - . ID=GSCOCP00033040001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR001360,InterPro:IPR013781,InterPro:IPR017853,PANTHER:PTHR10353,PFAM:PF00232,SUPERFAMILY:SSF51445,SwissProt:Q339X2,SwissProt:Q8L7J2,SwissProt:Q9FZE0,TAIR:AT1G26560.1,TAIR:AT2G44480.1,TAIR:AT5G54570.1,TrEMBL:D3YJ59,TrEMBL:F6HF75,TrEMBL:F6HF76;Derives_from=GSCOCT00033040001;Name=Cc11_g02010;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0043169,CC_EC_number:3.2.1.21,PRODUCT:Beta-glucosidase 34,CC_functional_completeness:fragment,CC_gene:BGLU34,CC_gene:BGLU40,CC_gene:BGLU6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033040001~ Beta-glucosidase 34~ BGLU34~ fragment;original_location=join(1945412..1945544%2C1945643..1945734);owner=coffea | |
| 55941 chr11 manual_curation exon 6202204 6202336 . - . Parent=GSCOCT00033040001 | |
| 55942 chr11 manual_curation exon 6202014 6202105 . - . Parent=GSCOCT00033040001 | |
| 55943 chr11 manual_curation CDS 6202204 6202336 . - 0 Parent=GSCOCT00033040001 | |
| 55944 chr11 manual_curation CDS 6202014 6202105 . - 1 Parent=GSCOCT00033040001 | |
| 55945 chr11 manual_curation gene 6214531 6220426 . + . ID=GSCOCG00033038001;Name=Cc11_g02020 | |
| 55946 chr11 manual_curation mRNA 6214531 6220426 . + . ID=GSCOCT00033038001;Parent=GSCOCG00033038001;Name=Cc11_g02020 | |
| 55947 chr11 manual_curation polypeptide 6214531 6219365 . + . ID=GSCOCP00033038001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:P0DI17,SwissProt:P0DI18,SwissProt:Q8W474,TAIR:AT1G58390.1,TAIR:AT1G58848.1,TAIR:AT1G59218.1,TrEMBL:B9S717,TrEMBL:F6I153,TrEMBL:G7IID2;Derives_from=GSCOCT00033038001;Name=Cc11_g02020;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable disease resistance protein RDL6,CC_functional_completeness:complete,CC_gene:RDL6,CC_gene:RF9,CC_gene:At1g58390;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033038001~ Putative Probable disease resistance protein RDL6~ RDL6~ complete;original_location=complement(join(1932932..1933217%2C1931135..1932399%2C1930611..1931065%2C1928383..1928437));owner=coffea | |
| 55948 chr11 manual_curation exon 6219311 6220426 . + . Parent=GSCOCT00033038001 | |
| 55949 chr11 manual_curation exon 6216683 6217137 . + . Parent=GSCOCT00033038001 | |
| 55950 chr11 manual_curation exon 6215349 6216613 . + . Parent=GSCOCT00033038001 | |
| 55951 chr11 manual_curation exon 6214531 6214816 . + . Parent=GSCOCT00033038001 | |
| 55952 chr11 manual_curation CDS 6219311 6219365 . + 2 Parent=GSCOCT00033038001 | |
| 55953 chr11 manual_curation CDS 6216683 6217137 . + 0 Parent=GSCOCT00033038001 | |
| 55954 chr11 manual_curation CDS 6215349 6216613 . + 1 Parent=GSCOCT00033038001 | |
| 55955 chr11 manual_curation CDS 6214531 6214816 . + 0 Parent=GSCOCT00033038001 | |
| 55956 chr11 manual_curation gene 6227836 6234021 . - . ID=GSCOCG00033037001;Name=Cc11_g02030 | |
| 55957 chr11 manual_curation mRNA 6227836 6234021 . - . ID=GSCOCT00033037001;Parent=GSCOCG00033037001;Name=Cc11_g02030 | |
| 55958 chr11 manual_curation polypeptide 6227836 6234021 . - . ID=GSCOCP00033037001;Dbxref=InterPro:IPR005031,PFAM:PF03364,TAIR:AT5G08720.1,TrEMBL:D7M201,TrEMBL:I1JXW9,TrEMBL:Q9C5A5;Derives_from=GSCOCT00033037001;Name=Cc11_g02030;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative CONTAINS InterPro DOMAIN/s,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033037001~ Putative CONTAINS InterPro DOMAIN/s: Streptomyces cyclase/dehydrase (InterPro:IPR005031)%3B BEST Arabidopsis thaliana protein match is: Polyketide cyclase / dehydrase and lipid transport protein (TAIR:AT4G01650.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ unknown_gene~ fragment;original_location=join(1913727..1913758%2C1913950..1914021%2C1915185..1915305%2C1916016..1916101%2C1917754..1917773%2C1918035..1918141%2C1918201..1918334%2C1919505..1919649%2C1919745..1919912);owner=coffea | |
| 55959 chr11 manual_curation exon 6233990 6234021 . - . Parent=GSCOCT00033037001 | |
| 55960 chr11 manual_curation exon 6233727 6233798 . - . Parent=GSCOCT00033037001 | |
| 55961 chr11 manual_curation exon 6232443 6232563 . - . Parent=GSCOCT00033037001 | |
| 55962 chr11 manual_curation exon 6231647 6231732 . - . Parent=GSCOCT00033037001 | |
| 55963 chr11 manual_curation exon 6229975 6229994 . - . Parent=GSCOCT00033037001 | |
| 55964 chr11 manual_curation exon 6229607 6229713 . - . Parent=GSCOCT00033037001 | |
| 55965 chr11 manual_curation exon 6229414 6229547 . - . Parent=GSCOCT00033037001 | |
| 55966 chr11 manual_curation exon 6228099 6228243 . - . Parent=GSCOCT00033037001 | |
| 55967 chr11 manual_curation exon 6227836 6228003 . - . Parent=GSCOCT00033037001 | |
| 55968 chr11 manual_curation CDS 6233990 6234021 . - 0 Parent=GSCOCT00033037001 | |
| 55969 chr11 manual_curation CDS 6233727 6233798 . - 2 Parent=GSCOCT00033037001 | |
| 55970 chr11 manual_curation CDS 6232443 6232563 . - 2 Parent=GSCOCT00033037001 | |
| 55971 chr11 manual_curation CDS 6231647 6231732 . - 0 Parent=GSCOCT00033037001 | |
| 55972 chr11 manual_curation CDS 6229975 6229994 . - 2 Parent=GSCOCT00033037001 | |
| 55973 chr11 manual_curation CDS 6229607 6229713 . - 1 Parent=GSCOCT00033037001 | |
| 55974 chr11 manual_curation CDS 6229414 6229547 . - 0 Parent=GSCOCT00033037001 | |
| 55975 chr11 manual_curation CDS 6228099 6228243 . - 2 Parent=GSCOCT00033037001 | |
| 55976 chr11 manual_curation CDS 6227836 6228003 . - 0 Parent=GSCOCT00033037001 | |
| 55977 chr11 manual_curation gene 6250668 6256853 . + . ID=GSCOCG00033036001;Name=Cc11_g02040 | |
| 55978 chr11 manual_curation mRNA 6250668 6256853 . + . ID=GSCOCT00033036001;Parent=GSCOCG00033036001;Name=Cc11_g02040 | |
| 55979 chr11 manual_curation polypeptide 6250668 6256032 . + . ID=GSCOCP00033036001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q8W474,SwissProt:Q9FJB5,SwissProt:Q9SX38,TAIR:AT1G50180.1,TAIR:AT1G58390.1,TAIR:AT5G35450.1,TrEMBL:A5BY94,TrEMBL:F6HCD0,TrEMBL:F6HCD1;Derives_from=GSCOCT00033036001;Name=Cc11_g02040;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance protein At1g50180,CC_functional_completeness:complete,CC_gene:At1g50180,CC_gene:At1g58390,CC_gene:RPP8L3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033036001~ Putative disease resistance protein At1g50180~ At1g50180~ complete;original_location=complement(join(1896448..1897080%2C1896030..1896294%2C1894482..1895175%2C1893375..1894235%2C1891716..1891776));owner=coffea | |
| 55980 chr11 manual_curation exon 6255972 6256853 . + . Parent=GSCOCT00033036001 | |
| 55981 chr11 manual_curation exon 6253513 6254373 . + . Parent=GSCOCT00033036001 | |
| 55982 chr11 manual_curation exon 6252573 6253266 . + . Parent=GSCOCT00033036001 | |
| 55983 chr11 manual_curation exon 6251454 6251718 . + . Parent=GSCOCT00033036001 | |
| 55984 chr11 manual_curation exon 6250668 6251300 . + . Parent=GSCOCT00033036001 | |
| 55985 chr11 manual_curation CDS 6255972 6256032 . + 2 Parent=GSCOCT00033036001 | |
| 55986 chr11 manual_curation CDS 6253513 6254373 . + 2 Parent=GSCOCT00033036001 | |
| 55987 chr11 manual_curation CDS 6252573 6253266 . + 1 Parent=GSCOCT00033036001 | |
| 55988 chr11 manual_curation CDS 6251454 6251718 . + 0 Parent=GSCOCT00033036001 | |
| 55989 chr11 manual_curation CDS 6250668 6251300 . + 0 Parent=GSCOCT00033036001 | |
| 55990 chr11 manual_curation gene 6282140 6285506 . + . ID=GSCOCG00033035001;Name=Cc11_g02050 | |
| 55991 chr11 manual_curation mRNA 6282140 6285506 . + . ID=GSCOCT00033035001;Parent=GSCOCG00033035001;Name=Cc11_g02050 | |
| 55992 chr11 manual_curation polypeptide 6282140 6285506 . + . ID=GSCOCP00033035001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q8W474,SwissProt:Q9SX38,SwissProt:Q9XIF0,TAIR:AT1G58390.1,TAIR:AT1G59218.1,TAIR:AT1G59780.1,TrEMBL:B9S717,TrEMBL:G7IID2,TrEMBL:I1N4M6;Derives_from=GSCOCT00033035001;Name=Cc11_g02050;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable disease resistance protein At1g58390,CC_functional_completeness:complete,CC_gene:At1g58390,CC_gene:At1g59780,CC_gene:At1g50180;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033035001~ Putative Probable disease resistance protein At1g58390~ At1g58390~ complete;original_location=complement(join(1864570..1865608%2C1862242..1864061));owner=coffea | |
| 55993 chr11 manual_curation exon 6283687 6285506 . + . Parent=GSCOCT00033035001 | |
| 55994 chr11 manual_curation exon 6282140 6283178 . + . Parent=GSCOCT00033035001 | |
| 55995 chr11 manual_curation CDS 6283687 6285506 . + 1 Parent=GSCOCT00033035001 | |
| 55996 chr11 manual_curation CDS 6282140 6283178 . + 0 Parent=GSCOCT00033035001 | |
| 55997 chr11 manual_curation gene 6294842 6297912 . + . ID=GSCOCG00033032001;Name=Cc11_g02060 | |
| 55998 chr11 manual_curation mRNA 6294842 6297912 . + . ID=GSCOCT00033032001;Parent=GSCOCG00033032001;Name=Cc11_g02060 | |
| 55999 chr11 manual_curation polypeptide 6294842 6297912 . + . ID=GSCOCP00033032001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:P0DI18,SwissProt:Q8W474,SwissProt:Q9SX38,TAIR:AT1G50180.1,TAIR:AT1G58390.1,TAIR:AT1G59218.1,TrEMBL:A5BY94,TrEMBL:B9S717,TrEMBL:F6HCD0;Derives_from=GSCOCT00033032001;Name=Cc11_g02060;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance protein At1g50180,CC_functional_completeness:fragment,CC_gene:At1g50180,CC_gene:At1g58390,CC_gene:RDL6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033032001~ Putative disease resistance protein At1g50180~ At1g50180~ fragment;original_location=complement(join(1851865..1852906%2C1849836..1851259));owner=coffea | |
| 56000 chr11 manual_curation exon 6296489 6297912 . + . Parent=GSCOCT00033032001 | |
| 56001 chr11 manual_curation exon 6294842 6295883 . + . Parent=GSCOCT00033032001 | |
| 56002 chr11 manual_curation CDS 6296489 6297912 . + 1 Parent=GSCOCT00033032001 | |
| 56003 chr11 manual_curation CDS 6294842 6295883 . + 0 Parent=GSCOCT00033032001 | |
| 56004 chr11 manual_curation gene 6305879 6307532 . + . ID=GSCOCG00033031001;Name=Cc11_g02070 | |
| 56005 chr11 manual_curation mRNA 6305879 6307532 . + . ID=GSCOCT00033031001;Parent=GSCOCG00033031001;Name=Cc11_g02070 | |
| 56006 chr11 manual_curation polypeptide 6305879 6307315 . + . ID=GSCOCP00033031001;Dbxref=SwissProt:P0C8S1,SwissProt:Q8W4J9,SwissProt:Q9FJB5,TAIR:AT5G35450.1,TAIR:AT5G43470.1,TAIR:AT5G48620.1,TrEMBL:B9S717,TrEMBL:G7IID2,TrEMBL:I1MH59;Derives_from=GSCOCT00033031001;Name=Cc11_g02070;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Disease resistance RPP8-like protein 3,CC_functional_completeness:fragment,CC_gene:RPP8L3,CC_gene:RPP8L2,CC_gene:RPP8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033031001~ Putative Disease resistance RPP8-like protein 3~ RPP8L3~ fragment;original_location=complement(join(1841502..1841869%2C1840433..1840448));owner=coffea | |
| 56007 chr11 manual_curation exon 6307300 6307532 . + . Parent=GSCOCT00033031001 | |
| 56008 chr11 manual_curation exon 6305879 6306246 . + . Parent=GSCOCT00033031001 | |
| 56009 chr11 manual_curation CDS 6307300 6307315 . + 2 Parent=GSCOCT00033031001 | |
| 56010 chr11 manual_curation CDS 6305879 6306246 . + 0 Parent=GSCOCT00033031001 | |
| 56011 chr11 manual_curation gene 6343174 6346233 . + . ID=GSCOCG00033029001;Name=Cc11_g02080 | |
| 56012 chr11 manual_curation mRNA 6343174 6346233 . + . ID=GSCOCT00033029001;Parent=GSCOCG00033029001;Name=Cc11_g02080 | |
| 56013 chr11 manual_curation polypeptide 6343684 6345961 . + . ID=GSCOCP00033029001;Dbxref=GENE3D:G3DSA:3.40.640.10,InterPro:IPR004636,InterPro:IPR005814,InterPro:IPR015421,InterPro:IPR015424,PANTHER:PTHR11986,PANTHER:PTHR11986:SF19,PFAM:PF00202,SUPERFAMILY:SSF53383,SwissProt:O04866,SwissProt:Q07907,SwissProt:Q9M8M7,TAIR:AT1G80600.1,TAIR:AT2G38400.2,TAIR:AT5G46180.1,TrEMBL:B9RI18,TrEMBL:F6HXR4,TrEMBL:I1LEC3;Derives_from=GSCOCT00033029001;Name=Cc11_g02080;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0006525,GO:0008483,GO:0030170,CC_EC_number:2.6.1.11,PRODUCT:Acetylornithine aminotransferase%2C chloroplastic/mitochondrial,CC_functional_completeness:fragment,CC_gene:WIN1,CC_gene:AG118,CC_gene:argD;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033029001~ Acetylornithine aminotransferase%2C chloroplastic/mitochondrial~ WIN1~ fragment;original_location=complement(join(1804039..1804064%2C1803764..1803944%2C1803135..1803283%2C1802911..1802995%2C1801787..1802278));owner=coffea | |
| 56014 chr11 manual_curation exon 6345470 6346233 . + . Parent=GSCOCT00033029001 | |
| 56015 chr11 manual_curation exon 6344753 6344837 . + . Parent=GSCOCT00033029001 | |
| 56016 chr11 manual_curation exon 6344465 6344613 . + . Parent=GSCOCT00033029001 | |
| 56017 chr11 manual_curation exon 6343804 6343984 . + . Parent=GSCOCT00033029001 | |
| 56018 chr11 manual_curation exon 6343174 6343709 . + . Parent=GSCOCT00033029001 | |
| 56019 chr11 manual_curation CDS 6345470 6345961 . + 0 Parent=GSCOCT00033029001 | |
| 56020 chr11 manual_curation CDS 6344753 6344837 . + 2 Parent=GSCOCT00033029001 | |
| 56021 chr11 manual_curation CDS 6344465 6344613 . + 0 Parent=GSCOCT00033029001 | |
| 56022 chr11 manual_curation CDS 6343804 6343984 . + 2 Parent=GSCOCT00033029001 | |
| 56023 chr11 manual_curation CDS 6343684 6343709 . + 0 Parent=GSCOCT00033029001 | |
| 56024 chr11 manual_curation gene 6347619 6356444 . - . ID=GSCOCG00033028001;Name=Cc11_g02090 | |
| 56025 chr11 manual_curation mRNA 6347619 6356444 . - . ID=GSCOCT00033028001;Parent=GSCOCG00033028001;Name=Cc11_g02090 | |
| 56026 chr11 manual_curation polypeptide 6347780 6355722 . - . ID=GSCOCP00033028001;Dbxref=InterPro:IPR005031,PFAM:PF03364,TAIR:AT4G01650.1,TAIR:AT5G08720.1,TrEMBL:B9H4P5,TrEMBL:B9SA97,TrEMBL:F6H4G3;Derives_from=GSCOCT00033028001;Name=Cc11_g02090;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:CONTAINS InterPro DOMAIN/s,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033028001~ CONTAINS InterPro DOMAIN/s: Streptomyces cyclase/dehydrase (InterPro:IPR005031)%3B BEST Arabidopsis thaliana protein match is: Polyketide cyclase / dehydrase and lipid transport protein (TAIR:AT4G01650.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(1792026..1792420%2C1793829..1793949%2C1794671..1794756%2C1796142..1796559%2C1796652..1796752%2C1798008..1798074%2C1798192..1798419%2C1798672..1799133%2C1799361..1799433%2C1799736..1799968);owner=coffea | |
| 56027 chr11 manual_curation exon 6355328 6356444 . - . Parent=GSCOCT00033028001 | |
| 56028 chr11 manual_curation exon 6353799 6353919 . - . Parent=GSCOCT00033028001 | |
| 56029 chr11 manual_curation exon 6352992 6353077 . - . Parent=GSCOCT00033028001 | |
| 56030 chr11 manual_curation exon 6351189 6351606 . - . Parent=GSCOCT00033028001 | |
| 56031 chr11 manual_curation exon 6350996 6351096 . - . Parent=GSCOCT00033028001 | |
| 56032 chr11 manual_curation exon 6349674 6349740 . - . Parent=GSCOCT00033028001 | |
| 56033 chr11 manual_curation exon 6349329 6349556 . - . Parent=GSCOCT00033028001 | |
| 56034 chr11 manual_curation exon 6348615 6349076 . - . Parent=GSCOCT00033028001 | |
| 56035 chr11 manual_curation exon 6348315 6348387 . - . Parent=GSCOCT00033028001 | |
| 56036 chr11 manual_curation exon 6347619 6348012 . - . Parent=GSCOCT00033028001 | |
| 56037 chr11 manual_curation CDS 6355328 6355722 . - 0 Parent=GSCOCT00033028001 | |
| 56038 chr11 manual_curation CDS 6353799 6353919 . - 2 Parent=GSCOCT00033028001 | |
| 56039 chr11 manual_curation CDS 6352992 6353077 . - 0 Parent=GSCOCT00033028001 | |
| 56040 chr11 manual_curation CDS 6351189 6351606 . - 2 Parent=GSCOCT00033028001 | |
| 56041 chr11 manual_curation CDS 6350996 6351096 . - 0 Parent=GSCOCT00033028001 | |
| 56042 chr11 manual_curation CDS 6349674 6349740 . - 2 Parent=GSCOCT00033028001 | |
| 56043 chr11 manual_curation CDS 6349329 6349556 . - 0 Parent=GSCOCT00033028001 | |
| 56044 chr11 manual_curation CDS 6348615 6349076 . - 0 Parent=GSCOCT00033028001 | |
| 56045 chr11 manual_curation CDS 6348315 6348387 . - 0 Parent=GSCOCT00033028001 | |
| 56046 chr11 manual_curation CDS 6347780 6348012 . - 1 Parent=GSCOCT00033028001 | |
| 56047 chr11 manual_curation gene 6505910 6507871 . + . ID=GSCOCG00033025001;Name=Cc11_g02100 | |
| 56048 chr11 manual_curation mRNA 6505910 6507871 . + . ID=GSCOCT00033025001;Parent=GSCOCG00033025001;Name=Cc11_g02100 | |
| 56049 chr11 manual_curation polypeptide 6505910 6507871 . + . ID=GSCOCP00033025001;Dbxref=InterPro:IPR002156,InterPro:IPR012337,InterPro:IPR015706,PANTHER:PTHR19446,PFAM:PF00075,PROFILE:PS50879,SUPERFAMILY:SSF53098,SwissProt:P0C2F6,TAIR:AT3G24255.1,TrEMBL:A5B6Q1,TrEMBL:G7ZUP0,TrEMBL:Q6L3X8;Derives_from=GSCOCT00033025001;Name=Cc11_g02100;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0004523,CC_EC_number:missing_EC_number,PRODUCT:Putative ribonuclease H protein At1g65750,CC_functional_completeness:complete,CC_gene:At1g65750;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033025001~ Putative ribonuclease H protein At1g65750~ At1g65750~ complete;original_location=complement(join(1641393..1641838%2C1640755..1641278%2C1639877..1640475));owner=coffea | |
| 56050 chr11 manual_curation exon 6507273 6507871 . + . Parent=GSCOCT00033025001 | |
| 56051 chr11 manual_curation exon 6506470 6506993 . + . Parent=GSCOCT00033025001 | |
| 56052 chr11 manual_curation exon 6505910 6506355 . + . Parent=GSCOCT00033025001 | |
| 56053 chr11 manual_curation CDS 6507273 6507871 . + 1 Parent=GSCOCT00033025001 | |
| 56054 chr11 manual_curation CDS 6506470 6506993 . + 2 Parent=GSCOCT00033025001 | |
| 56055 chr11 manual_curation CDS 6505910 6506355 . + 0 Parent=GSCOCT00033025001 | |
| 56056 chr11 manual_curation gene 6526834 6527663 . + . ID=GSCOCG00033024001;Name=Cc11_g02110 | |
| 56057 chr11 manual_curation mRNA 6526834 6527663 . + . ID=GSCOCT00033024001;Parent=GSCOCG00033024001;Name=Cc11_g02110 | |
| 56058 chr11 manual_curation polypeptide 6526834 6527663 . + . ID=GSCOCP00033024001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:C0LGP4,SwissProt:C0LGT6,SwissProt:Q9SD62,TAIR:AT3G47090.1,TAIR:AT3G47110.1,TAIR:AT5G20480.1,TrEMBL:B9IHK8,TrEMBL:B9SWC8,TrEMBL:B9T577;Derives_from=GSCOCT00033024001;Name=Cc11_g02110;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.10.2,PRODUCT:Putative LRR receptor-like serine/threonine-protein kinase EFR,CC_functional_completeness:fragment,CC_gene:EFR,CC_gene:At3g47110,CC_gene:At3g47570;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033024001~ Putative LRR receptor-like serine/threonine-protein kinase EFR~ EFR~ fragment;original_location=complement(join(1620611..1620914%2C1620338..1620437%2C1620085..1620226));owner=coffea | |
| 56059 chr11 manual_curation exon 6527522 6527663 . + . Parent=GSCOCT00033024001 | |
| 56060 chr11 manual_curation exon 6527311 6527410 . + . Parent=GSCOCT00033024001 | |
| 56061 chr11 manual_curation exon 6526834 6527137 . + . Parent=GSCOCT00033024001 | |
| 56062 chr11 manual_curation CDS 6527522 6527663 . + 2 Parent=GSCOCT00033024001 | |
| 56063 chr11 manual_curation CDS 6527311 6527410 . + 1 Parent=GSCOCT00033024001 | |
| 56064 chr11 manual_curation CDS 6526834 6527137 . + 0 Parent=GSCOCT00033024001 | |
| 56065 chr11 manual_curation gene 6535478 6536451 . + . ID=GSCOCG00033022001;Name=Cc11_g02120 | |
| 56066 chr11 manual_curation mRNA 6535478 6536451 . + . ID=GSCOCT00033022001;Parent=GSCOCG00033022001;Name=Cc11_g02120 | |
| 56067 chr11 manual_curation polypeptide 6535478 6536451 . + . ID=GSCOCP00033022001;Dbxref=InterPro:IPR001611,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SwissProt:C0LGP4,SwissProt:C0LGT6,SwissProt:Q9SD62,TAIR:AT3G47570.1,TAIR:AT5G20480.1,TAIR:AT5G62710.1,TrEMBL:B9I0G6,TrEMBL:B9SWC8,TrEMBL:B9T2Z9;Derives_from=GSCOCT00033022001;Name=Cc11_g02120;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570,CC_functional_completeness:fragment,CC_gene:At3g47570,CC_gene:EFR,CC_gene:At3g47110;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033022001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570~ At3g47570~ fragment;original_location=complement(join(1611835..1612270%2C1611297..1611490));owner=coffea | |
| 56068 chr11 manual_curation exon 6536258 6536451 . + . Parent=GSCOCT00033022001 | |
| 56069 chr11 manual_curation exon 6535478 6535913 . + . Parent=GSCOCT00033022001 | |
| 56070 chr11 manual_curation CDS 6536258 6536451 . + 1 Parent=GSCOCT00033022001 | |
| 56071 chr11 manual_curation CDS 6535478 6535913 . + 0 Parent=GSCOCT00033022001 | |
| 56072 chr11 manual_curation gene 6547136 6549551 . + . ID=GSCOCG00033021001;Name=Cc11_g02130 | |
| 56073 chr11 manual_curation mRNA 6547136 6549551 . + . ID=GSCOCT00033021001;Parent=GSCOCG00033021001;Name=Cc11_g02130 | |
| 56074 chr11 manual_curation polypeptide 6547136 6549551 . + . ID=GSCOCP00033021001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:C0LGP4,SwissProt:C0LGT6,SwissProt:Q9SD62,TAIR:AT3G47090.1,TAIR:AT3G47570.1,TAIR:AT5G20480.1,TrEMBL:A5B5R9,TrEMBL:B9I1J3,TrEMBL:B9T577;Derives_from=GSCOCT00033021001;Name=Cc11_g02130;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative LRR receptor-like serine/threonine-protein kinase EFR,CC_functional_completeness:complete,CC_gene:EFR,CC_gene:At3g47570,CC_gene:At3g47110;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033021001~ Putative LRR receptor-like serine/threonine-protein kinase EFR~ EFR~ complete;original_location=complement(join(1600357..1600612%2C1599596..1600202%2C1598691..1599379%2C1598425..1598555%2C1598197..1598340));owner=coffea | |
| 56075 chr11 manual_curation exon 6549408 6549551 . + . Parent=GSCOCT00033021001 | |
| 56076 chr11 manual_curation exon 6549193 6549323 . + . Parent=GSCOCT00033021001 | |
| 56077 chr11 manual_curation exon 6548369 6549057 . + . Parent=GSCOCT00033021001 | |
| 56078 chr11 manual_curation exon 6547546 6548152 . + . Parent=GSCOCT00033021001 | |
| 56079 chr11 manual_curation exon 6547136 6547391 . + . Parent=GSCOCT00033021001 | |
| 56080 chr11 manual_curation CDS 6549408 6549551 . + 0 Parent=GSCOCT00033021001 | |
| 56081 chr11 manual_curation CDS 6549193 6549323 . + 1 Parent=GSCOCT00033021001 | |
| 56082 chr11 manual_curation CDS 6548369 6549057 . + 2 Parent=GSCOCT00033021001 | |
| 56083 chr11 manual_curation CDS 6547546 6548152 . + 1 Parent=GSCOCT00033021001 | |
| 56084 chr11 manual_curation CDS 6547136 6547391 . + 0 Parent=GSCOCT00033021001 | |
| 56085 chr11 manual_curation gene 6573022 6576527 . - . ID=GSCOCG00033020001;Name=Cc11_g02140 | |
| 56086 chr11 manual_curation mRNA 6573022 6576527 . - . ID=GSCOCT00033020001;Parent=GSCOCG00033020001;Name=Cc11_g02140 | |
| 56087 chr11 manual_curation polypeptide 6573022 6576527 . - . ID=GSCOCP00033020001;Dbxref=InterPro:IPR000270,InterPro:IPR003035,PFAM:PF00564,PFAM:PF02042,SMART:SM00666,SwissProt:Q5NB82,SwissProt:Q84TH9,SwissProt:Q8RWY4,TAIR:AT1G64530.1,TAIR:AT3G59580.1,TAIR:AT4G24020.1,TrEMBL:B9RYP2,TrEMBL:I1L361,TrEMBL:I1MPM2;Derives_from=GSCOCT00033020001;Name=Cc11_g02140;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:NLP7,CC_gene:NLP6,CC_gene:NLP3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033020001~ Hypothetical protein~ NLP7~ missing_functional_completeness;original_location=join(1571221..1571287%2C1571405..1571868%2C1572103..1572191%2C1573990..1574183%2C1574281..1574726);owner=coffea | |
| 56088 chr11 manual_curation exon 6576461 6576527 . - . Parent=GSCOCT00033020001 | |
| 56089 chr11 manual_curation exon 6575880 6576343 . - . Parent=GSCOCT00033020001 | |
| 56090 chr11 manual_curation exon 6575557 6575645 . - . Parent=GSCOCT00033020001 | |
| 56091 chr11 manual_curation exon 6573565 6573758 . - . Parent=GSCOCT00033020001 | |
| 56092 chr11 manual_curation exon 6573022 6573467 . - . Parent=GSCOCT00033020001 | |
| 56093 chr11 manual_curation CDS 6576461 6576527 . - 0 Parent=GSCOCT00033020001 | |
| 56094 chr11 manual_curation CDS 6575880 6576343 . - 1 Parent=GSCOCT00033020001 | |
| 56095 chr11 manual_curation CDS 6575557 6575645 . - 0 Parent=GSCOCT00033020001 | |
| 56096 chr11 manual_curation CDS 6573565 6573758 . - 2 Parent=GSCOCT00033020001 | |
| 56097 chr11 manual_curation CDS 6573022 6573467 . - 1 Parent=GSCOCT00033020001 | |
| 56098 chr11 manual_curation gene 6579606 6580300 . - . ID=GSCOCG00033019001;Name=Cc11_g02150 | |
| 56099 chr11 manual_curation mRNA 6579606 6580300 . - . ID=GSCOCT00033019001;Parent=GSCOCG00033019001;Name=Cc11_g02150 | |
| 56100 chr11 manual_curation polypeptide 6579832 6580300 . - . ID=GSCOCP00033019001;Dbxref=SwissProt:Q9FHD7,TAIR:AT3G54030.1,TAIR:AT4G00710.1,TAIR:AT5G59010.1,TrEMBL:B9S387,TrEMBL:D7SK53,TrEMBL:D7THE2;Derives_from=GSCOCT00033019001;Name=Cc11_g02150;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:At5g41260;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033019001~ Hypothetical protein~ At5g41260~ missing_functional_completeness;original_location=join(1567448..1567529%2C1567612..1567916);owner=coffea | |
| 56101 chr11 manual_curation exon 6580219 6580300 . - . Parent=GSCOCT00033019001 | |
| 56102 chr11 manual_curation exon 6579606 6580136 . - . Parent=GSCOCT00033019001 | |
| 56103 chr11 manual_curation CDS 6580219 6580300 . - 0 Parent=GSCOCT00033019001 | |
| 56104 chr11 manual_curation CDS 6579832 6580136 . - 1 Parent=GSCOCT00033019001 | |
| 56105 chr11 manual_curation gene 6587729 6589744 . - . ID=GSCOCG00033017001;Name=Cc11_g02160 | |
| 56106 chr11 manual_curation mRNA 6587729 6589744 . - . ID=GSCOCT00033017001;Parent=GSCOCG00033017001;Name=Cc11_g02160 | |
| 56107 chr11 manual_curation polypeptide 6587903 6589744 . - . ID=GSCOCP00033017001;Dbxref=InterPro:IPR000270,InterPro:IPR003035,PFAM:PF00564,PFAM:PF02042,SMART:SM00666,SwissProt:Q5NB82,SwissProt:Q84TH9,SwissProt:Q8RWY4,TAIR:AT1G64530.1,TAIR:AT1G76350.1,TAIR:AT4G24020.1,TrEMBL:I1L361,TrEMBL:I1LDQ1,TrEMBL:I1NGV0;Derives_from=GSCOCT00033017001;Name=Cc11_g02160;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized protein,CC_functional_completeness:fragment,CC_gene:NLP7,CC_gene:NLP6,CC_gene:NLP3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033017001~ Putative Uncharacterized protein~ NLP7~ fragment;original_location=join(1558004..1558067%2C1558185..1559333%2C1559427..1559845);owner=coffea | |
| 56108 chr11 manual_curation exon 6589681 6589744 . - . Parent=GSCOCT00033017001 | |
| 56109 chr11 manual_curation exon 6588415 6589563 . - . Parent=GSCOCT00033017001 | |
| 56110 chr11 manual_curation exon 6587729 6588321 . - . Parent=GSCOCT00033017001 | |
| 56111 chr11 manual_curation CDS 6589681 6589744 . - 0 Parent=GSCOCT00033017001 | |
| 56112 chr11 manual_curation CDS 6588415 6589563 . - 1 Parent=GSCOCT00033017001 | |
| 56113 chr11 manual_curation CDS 6587903 6588321 . - 1 Parent=GSCOCT00033017001 | |
| 56114 chr11 manual_curation gene 6599291 6605738 . + . ID=GSCOCG00033016001;Name=Cc11_g02170 | |
| 56115 chr11 manual_curation mRNA 6599291 6605738 . + . ID=GSCOCT00033016001;Parent=GSCOCG00033016001;Name=Cc11_g02170 | |
| 56116 chr11 manual_curation polypeptide 6599291 6605738 . + . ID=GSCOCP00033016001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:C0LGP4,SwissProt:C0LGT6,SwissProt:Q9SD62,TAIR:AT3G47570.1,TAIR:AT3G47580.1,TAIR:AT5G20480.1,TrEMBL:B9IHK8,TrEMBL:B9SM56,TrEMBL:B9SWC8;Derives_from=GSCOCT00033016001;Name=Cc11_g02170;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570,CC_functional_completeness:complete,CC_gene:At3g47570,CC_gene:EFR,CC_gene:At3g47110;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033016001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570~ At3g47570~ complete;original_location=complement(join(1547680..1548457%2C1542535..1544520%2C1542010..1542362));owner=coffea | |
| 56117 chr11 manual_curation exon 6605386 6605738 . + . Parent=GSCOCT00033016001 | |
| 56118 chr11 manual_curation exon 6603228 6605213 . + . Parent=GSCOCT00033016001 | |
| 56119 chr11 manual_curation exon 6599291 6600068 . + . Parent=GSCOCT00033016001 | |
| 56120 chr11 manual_curation CDS 6605386 6605738 . + 1 Parent=GSCOCT00033016001 | |
| 56121 chr11 manual_curation CDS 6603228 6605213 . + 1 Parent=GSCOCT00033016001 | |
| 56122 chr11 manual_curation CDS 6599291 6600068 . + 0 Parent=GSCOCT00033016001 | |
| 56123 chr11 manual_curation gene 6624868 6625131 . + . ID=GSCOCG00033015001;Name=Cc11_g02180 | |
| 56124 chr11 manual_curation mRNA 6624868 6625131 . + . ID=GSCOCT00033015001;Parent=GSCOCG00033015001;Name=Cc11_g02180 | |
| 56125 chr11 manual_curation polypeptide 6624868 6625131 . + . ID=GSCOCP00033015001;Dbxref=InterPro:IPR002225,PFAM:PF01073,TAIR:AT2G33630.1,TrEMBL:I1MBY1,TrEMBL:I1MY69;Derives_from=GSCOCT00033015001;Name=Cc11_g02180;Ontology_term=CC_evidence_code:ISS,GO:0003854,GO:0006694,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033015001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(1522617..1522880);owner=coffea | |
| 56126 chr11 manual_curation exon 6624868 6625131 . + . Parent=GSCOCT00033015001 | |
| 56127 chr11 manual_curation CDS 6624868 6625131 . + 0 Parent=GSCOCT00033015001 | |
| 56128 chr11 manual_curation gene 6634890 6637565 . + . ID=GSCOCG00033014001;Name=Cc11_g02190 | |
| 56129 chr11 manual_curation mRNA 6634890 6637565 . + . ID=GSCOCT00033014001;Parent=GSCOCG00033014001;Name=Cc11_g02190 | |
| 56130 chr11 manual_curation polypeptide 6634890 6637565 . + . ID=GSCOCP00033014001;Dbxref=InterPro:IPR001611,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SwissProt:C0LGP4,SwissProt:C0LGT6,SwissProt:Q9SD62,TAIR:AT3G47110.1,TAIR:AT3G47580.1,TAIR:AT5G20480.1,TrEMBL:A5B5R9,TrEMBL:B9SWC8,TrEMBL:F6HP05;Derives_from=GSCOCT00033014001;Name=Cc11_g02190;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative LRR receptor-like serine/threonine-protein kinase EFR,CC_functional_completeness:complete,CC_gene:EFR,CC_gene:At3g47110,CC_gene:At3g47570;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033014001~ Putative LRR receptor-like serine/threonine-protein kinase EFR~ EFR~ complete;original_location=complement(join(1512381..1512858%2C1511910..1512297%2C1511712..1511786%2C1510696..1510815%2C1510183..1510264));owner=coffea | |
| 56131 chr11 manual_curation exon 6637484 6637565 . + . Parent=GSCOCT00033014001 | |
| 56132 chr11 manual_curation exon 6636933 6637052 . + . Parent=GSCOCT00033014001 | |
| 56133 chr11 manual_curation exon 6635962 6636036 . + . Parent=GSCOCT00033014001 | |
| 56134 chr11 manual_curation exon 6635451 6635838 . + . Parent=GSCOCT00033014001 | |
| 56135 chr11 manual_curation exon 6634890 6635367 . + . Parent=GSCOCT00033014001 | |
| 56136 chr11 manual_curation CDS 6637484 6637565 . + 2 Parent=GSCOCT00033014001 | |
| 56137 chr11 manual_curation CDS 6636933 6637052 . + 2 Parent=GSCOCT00033014001 | |
| 56138 chr11 manual_curation CDS 6635962 6636036 . + 2 Parent=GSCOCT00033014001 | |
| 56139 chr11 manual_curation CDS 6635451 6635838 . + 1 Parent=GSCOCT00033014001 | |
| 56140 chr11 manual_curation CDS 6634890 6635367 . + 0 Parent=GSCOCT00033014001 | |
| 56141 chr11 manual_curation gene 6637627 6641204 . + . ID=GSCOCG00033013001;Name=Cc11_g02200 | |
| 56142 chr11 manual_curation mRNA 6637627 6641204 . + . ID=GSCOCT00033013001;Parent=GSCOCG00033013001;Name=Cc11_g02200 | |
| 56143 chr11 manual_curation polypeptide 6637627 6641204 . + . ID=GSCOCP00033013001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR020635,PFAM:PF00560,PFAM:PF07714,PROFILE:PS50011,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:C0LGP4,SwissProt:C0LGT6,SwissProt:Q9SD62,TAIR:AT3G47570.1,TAIR:AT3G47580.1,TAIR:AT5G20480.1,TrEMBL:B9I1J3,TrEMBL:B9SM56,TrEMBL:F6H520;Derives_from=GSCOCT00033013001;Name=Cc11_g02200;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.10.2,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570,CC_functional_completeness:complete,CC_gene:At3g47570,CC_gene:EFR,CC_gene:At3g47110;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033013001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570~ At3g47570~ complete;original_location=complement(join(1510107..1510121%2C1509833..1509860%2C1508733..1509117%2C1508251..1508639%2C1507960..1508190%2C1507075..1507887%2C1506766..1506896%2C1506544..1506681));owner=coffea | |
| 56144 chr11 manual_curation exon 6641067 6641204 . + . Parent=GSCOCT00033013001 | |
| 56145 chr11 manual_curation exon 6640852 6640982 . + . Parent=GSCOCT00033013001 | |
| 56146 chr11 manual_curation exon 6639861 6640673 . + . Parent=GSCOCT00033013001 | |
| 56147 chr11 manual_curation exon 6639558 6639788 . + . Parent=GSCOCT00033013001 | |
| 56148 chr11 manual_curation exon 6639109 6639497 . + . Parent=GSCOCT00033013001 | |
| 56149 chr11 manual_curation exon 6638631 6639015 . + . Parent=GSCOCT00033013001 | |
| 56150 chr11 manual_curation exon 6637888 6637915 . + . Parent=GSCOCT00033013001 | |
| 56151 chr11 manual_curation exon 6637627 6637641 . + . Parent=GSCOCT00033013001 | |
| 56152 chr11 manual_curation CDS 6641067 6641204 . + 0 Parent=GSCOCT00033013001 | |
| 56153 chr11 manual_curation CDS 6640852 6640982 . + 1 Parent=GSCOCT00033013001 | |
| 56154 chr11 manual_curation CDS 6639861 6640673 . + 1 Parent=GSCOCT00033013001 | |
| 56155 chr11 manual_curation CDS 6639558 6639788 . + 1 Parent=GSCOCT00033013001 | |
| 56156 chr11 manual_curation CDS 6639109 6639497 . + 2 Parent=GSCOCT00033013001 | |
| 56157 chr11 manual_curation CDS 6638631 6639015 . + 1 Parent=GSCOCT00033013001 | |
| 56158 chr11 manual_curation CDS 6637888 6637915 . + 0 Parent=GSCOCT00033013001 | |
| 56159 chr11 manual_curation CDS 6637627 6637641 . + 0 Parent=GSCOCT00033013001 | |
| 56160 chr11 manual_curation gene 6668817 6669266 . + . ID=GSCOCG00033011001;Name=Cc11_g02210 | |
| 56161 chr11 manual_curation mRNA 6668817 6669266 . + . ID=GSCOCT00033011001;Parent=GSCOCG00033011001;Name=Cc11_g02210 | |
| 56162 chr11 manual_curation polypeptide 6668817 6669266 . + . ID=GSCOCP00033011001;Dbxref=InterPro:IPR000438,InterPro:IPR011762,PRINTS:PR01070,PROFILE:PS50980,SwissProt:A4GYS0,SwissProt:B1A944,SwissProt:Q14FE8,TAIR:ATCG00500.1,TrEMBL:D3WAY9,TrEMBL:D3WF96,TrEMBL:E5KUA5;Derives_from=GSCOCT00033011001;Name=Cc11_g02210;Ontology_term=CC_evidence_code:ISS,GO:0003989,GO:0006633,GO:0009317,GO:0016874,CC_EC_number:6.4.1.2,CC_EC_number:6.4.1.2,PRODUCT:Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:accD;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033011001~ Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta%2C chloroplastic~ accD~ fragment;original_location=complement(join(1478816..1478931%2C1478482..1478695));owner=coffea | |
| 56163 chr11 manual_curation exon 6669053 6669266 . + . Parent=GSCOCT00033011001 | |
| 56164 chr11 manual_curation exon 6668817 6668932 . + . Parent=GSCOCT00033011001 | |
| 56165 chr11 manual_curation CDS 6669053 6669266 . + 2 Parent=GSCOCT00033011001 | |
| 56166 chr11 manual_curation CDS 6668817 6668932 . + 0 Parent=GSCOCT00033011001 | |
| 56167 chr11 manual_curation gene 6717883 6720841 . + . ID=GSCOCG00033009001;Name=Cc11_g02220 | |
| 56168 chr11 manual_curation mRNA 6717883 6720841 . + . ID=GSCOCT00033009001;Parent=GSCOCG00033009001;Name=Cc11_g02220 | |
| 56169 chr11 manual_curation polypeptide 6718106 6720577 . + . ID=GSCOCP00033009001;Dbxref=GENE3D:G3DSA:3.40.640.10,GENE3D:G3DSA:3.90.1150.10,InterPro:IPR004636,InterPro:IPR005814,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,PANTHER:PTHR11986,PANTHER:PTHR11986:SF19,PFAM:PF00202,PROSITE:PS00600,SUPERFAMILY:SSF53383,SwissProt:O04866,SwissProt:Q55DT8,SwissProt:Q9M8M7,TAIR:AT1G80600.1,TAIR:AT2G38400.2,TAIR:AT5G46180.1,TIGRFAMs:TIGR00707,TrEMBL:A9PF72,TrEMBL:B9IJG0,TrEMBL:I1KJG6;Derives_from=GSCOCT00033009001;Name=Cc11_g02220;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0006525,GO:0008483,GO:0030170,CC_EC_number:2.6.1.11,PRODUCT:Acetylornithine aminotransferase%2C mitochondrial,CC_functional_completeness:complete,CC_gene:AG118,CC_gene:WIN1,CC_gene:argD;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033009001~ Acetylornithine aminotransferase%2C mitochondrial~ AG118~ complete;original_location=complement(join(1429226..1429642%2C1428317..1428751%2C1427171..1427704));owner=coffea | |
| 56170 chr11 manual_curation exon 6720044 6720841 . + . Parent=GSCOCT00033009001 | |
| 56171 chr11 manual_curation exon 6718997 6719431 . + . Parent=GSCOCT00033009001 | |
| 56172 chr11 manual_curation exon 6717883 6718522 . + . Parent=GSCOCT00033009001 | |
| 56173 chr11 manual_curation CDS 6720044 6720577 . + 0 Parent=GSCOCT00033009001 | |
| 56174 chr11 manual_curation CDS 6718997 6719431 . + 0 Parent=GSCOCT00033009001 | |
| 56175 chr11 manual_curation CDS 6718106 6718522 . + 0 Parent=GSCOCT00033009001 | |
| 56176 chr11 manual_curation gene 6732019 6734394 . + . ID=GSCOCG00033008001;Name=Cc11_g02230 | |
| 56177 chr11 manual_curation mRNA 6732019 6734394 . + . ID=GSCOCT00033008001;Parent=GSCOCG00033008001;Name=Cc11_g02230 | |
| 56178 chr11 manual_curation polypeptide 6732019 6734394 . + . ID=GSCOCP00033008001;Dbxref=InterPro:IPR000719,InterPro:IPR000858,InterPro:IPR001480,InterPro:IPR002290,InterPro:IPR003609,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00954,PFAM:PF01453,PROFILE:PS50011,PROFILE:PS50927,PROFILE:PS50948,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF51110,SUPERFAMILY:SSF56112,SwissProt:P17801,SwissProt:Q39203,SwissProt:Q9FLV4,TAIR:AT1G34300.1,TAIR:AT4G00340.1,TAIR:AT5G60900.1,TrEMBL:B9R758,TrEMBL:F6GZX1,TrEMBL:F6GZX6;Derives_from=GSCOCT00033008001;Name=Cc11_g02230;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0005529,GO:0006468,GO:0048544,CC_EC_number:2.7.11.25,PRODUCT:Putative receptor protein kinase ZmPK1,CC_functional_completeness:complete,CC_gene:PK1,CC_gene:At5g24080,CC_gene:SD22;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033008001~ Putative receptor protein kinase ZmPK1~ PK1~ complete;original_location=complement(1413354..1415729);owner=coffea | |
| 56179 chr11 manual_curation exon 6732019 6734394 . + . Parent=GSCOCT00033008001 | |
| 56180 chr11 manual_curation CDS 6732019 6734394 . + 0 Parent=GSCOCT00033008001 | |
| 56181 chr11 manual_curation gene 6797829 6830310 . + . ID=GSCOCG00033004001;Name=Cc11_g02240 | |
| 56182 chr11 manual_curation mRNA 6797829 6830310 . + . ID=GSCOCT00033004001;Parent=GSCOCG00033004001;Name=Cc11_g02240 | |
| 56183 chr11 manual_curation polypeptide 6797860 6829899 . + . ID=GSCOCP00033004001;Dbxref=GENE3D:G3DSA:1.25.40.20,GENE3D:G3DSA:2.30.29.30,InterPro:IPR001164,InterPro:IPR001849,InterPro:IPR002110,InterPro:IPR004148,InterPro:IPR011993,InterPro:IPR020683,PFAM:PF00023,PFAM:PF00169,PFAM:PF01412,PFAM:PF03114,PRINTS:PR00405,PROFILE:PS50003,PROFILE:PS50088,PROFILE:PS50115,PROFILE:PS50297,PROFILE:PS51021,SMART:SM00105,SMART:SM00233,SMART:SM00248,SMART:SM00721,SUPERFAMILY:SSF48403,SUPERFAMILY:SSF57863,SwissProt:Q5W7F2,SwissProt:Q9C6C3,SwissProt:Q9SMX5,TAIR:AT1G10870.1,TAIR:AT1G60860.1,TAIR:AT5G13300.1,TrEMBL:B9RY53,TrEMBL:D7KLK3,TrEMBL:I1LIX1;Derives_from=GSCOCT00033004001;Name=Cc11_g02240;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0005737,GO:0008060,GO:0008270,GO:0032312,CC_EC_number:missing_EC_number,PRODUCT:ADP-ribosylation factor GTPase-activating protein AGD4,CC_functional_completeness:complete,CC_gene:AGD4,CC_gene:AGD2,CC_gene:AGD3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033004001~ ADP-ribosylation factor GTPase-activating protein AGD4~ AGD4~ complete;original_location=complement(join(1349841..1349888%2C1349623..1349699%2C1347992..1348092%2C1345381..1345451%2C1342881..1342943%2C1342210..1342254%2C1339433..1339498%2C1336235..1336282%2C1336032..1336127%2C1335897..1335938%2C1335130..1335345%2C1334847..1334978%2C1330788..1331006%2C1330211..1330294%2C1329844..1330113%2C1326194..1326315%2C1325862..1325949%2C1320053..1320510%2C1317849..1317963));owner=coffea | |
| 56184 chr11 manual_curation exon 6829785 6830310 . + . Parent=GSCOCT00033004001 | |
| 56185 chr11 manual_curation exon 6827238 6827695 . + . Parent=GSCOCT00033004001 | |
| 56186 chr11 manual_curation exon 6821799 6821886 . + . Parent=GSCOCT00033004001 | |
| 56187 chr11 manual_curation exon 6821433 6821554 . + . Parent=GSCOCT00033004001 | |
| 56188 chr11 manual_curation exon 6817635 6817904 . + . Parent=GSCOCT00033004001 | |
| 56189 chr11 manual_curation exon 6817454 6817537 . + . Parent=GSCOCT00033004001 | |
| 56190 chr11 manual_curation exon 6816742 6816960 . + . Parent=GSCOCT00033004001 | |
| 56191 chr11 manual_curation exon 6812770 6812901 . + . Parent=GSCOCT00033004001 | |
| 56192 chr11 manual_curation exon 6812403 6812618 . + . Parent=GSCOCT00033004001 | |
| 56193 chr11 manual_curation exon 6811810 6811851 . + . Parent=GSCOCT00033004001 | |
| 56194 chr11 manual_curation exon 6811621 6811716 . + . Parent=GSCOCT00033004001 | |
| 56195 chr11 manual_curation exon 6811466 6811513 . + . Parent=GSCOCT00033004001 | |
| 56196 chr11 manual_curation exon 6808250 6808315 . + . Parent=GSCOCT00033004001 | |
| 56197 chr11 manual_curation exon 6805494 6805538 . + . Parent=GSCOCT00033004001 | |
| 56198 chr11 manual_curation exon 6804805 6804867 . + . Parent=GSCOCT00033004001 | |
| 56199 chr11 manual_curation exon 6802297 6802367 . + . Parent=GSCOCT00033004001 | |
| 56200 chr11 manual_curation exon 6799656 6799756 . + . Parent=GSCOCT00033004001 | |
| 56201 chr11 manual_curation exon 6798049 6798125 . + . Parent=GSCOCT00033004001 | |
| 56202 chr11 manual_curation exon 6797829 6797907 . + . Parent=GSCOCT00033004001 | |
| 56203 chr11 manual_curation CDS 6829785 6829899 . + 2 Parent=GSCOCT00033004001 | |
| 56204 chr11 manual_curation CDS 6827238 6827695 . + 0 Parent=GSCOCT00033004001 | |
| 56205 chr11 manual_curation CDS 6821799 6821886 . + 2 Parent=GSCOCT00033004001 | |
| 56206 chr11 manual_curation CDS 6821433 6821554 . + 0 Parent=GSCOCT00033004001 | |
| 56207 chr11 manual_curation CDS 6817635 6817904 . + 0 Parent=GSCOCT00033004001 | |
| 56208 chr11 manual_curation CDS 6817454 6817537 . + 0 Parent=GSCOCT00033004001 | |
| 56209 chr11 manual_curation CDS 6816742 6816960 . + 0 Parent=GSCOCT00033004001 | |
| 56210 chr11 manual_curation CDS 6812770 6812901 . + 0 Parent=GSCOCT00033004001 | |
| 56211 chr11 manual_curation CDS 6812403 6812618 . + 0 Parent=GSCOCT00033004001 | |
| 56212 chr11 manual_curation CDS 6811810 6811851 . + 0 Parent=GSCOCT00033004001 | |
| 56213 chr11 manual_curation CDS 6811621 6811716 . + 0 Parent=GSCOCT00033004001 | |
| 56214 chr11 manual_curation CDS 6811466 6811513 . + 0 Parent=GSCOCT00033004001 | |
| 56215 chr11 manual_curation CDS 6808250 6808315 . + 0 Parent=GSCOCT00033004001 | |
| 56216 chr11 manual_curation CDS 6805494 6805538 . + 0 Parent=GSCOCT00033004001 | |
| 56217 chr11 manual_curation CDS 6804805 6804867 . + 0 Parent=GSCOCT00033004001 | |
| 56218 chr11 manual_curation CDS 6802297 6802367 . + 1 Parent=GSCOCT00033004001 | |
| 56219 chr11 manual_curation CDS 6799656 6799756 . + 2 Parent=GSCOCT00033004001 | |
| 56220 chr11 manual_curation CDS 6798049 6798125 . + 0 Parent=GSCOCT00033004001 | |
| 56221 chr11 manual_curation CDS 6797860 6797907 . + 0 Parent=GSCOCT00033004001 | |
| 56222 chr11 manual_curation gene 6831060 6833112 . + . ID=GSCOCG00033003001;Name=Cc11_g02250 | |
| 56223 chr11 manual_curation mRNA 6831060 6833112 . + . ID=GSCOCT00033003001;Parent=GSCOCG00033003001;Name=Cc11_g02250 | |
| 56224 chr11 manual_curation polypeptide 6831060 6833112 . + . ID=GSCOCP00033003001;Dbxref=InterPro:IPR006566,InterPro:IPR013596,PFAM:PF08387,SMART:SM00579,TrEMBL:A5C5C2,TrEMBL:B9RAY0,TrEMBL:B9RI98;Derives_from=GSCOCT00033003001;Name=Cc11_g02250;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Ubiquitin-protein ligase%2C putative,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033003001~ Ubiquitin-protein ligase%2C putative~ unknown_gene~ fragment;original_location=complement(join(1316573..1316688%2C1315830..1316376%2C1314636..1315205));owner=coffea | |
| 56225 chr11 manual_curation exon 6832543 6833112 . + . Parent=GSCOCT00033003001 | |
| 56226 chr11 manual_curation exon 6831372 6831918 . + . Parent=GSCOCT00033003001 | |
| 56227 chr11 manual_curation exon 6831060 6831175 . + . Parent=GSCOCT00033003001 | |
| 56228 chr11 manual_curation CDS 6832543 6833112 . + 0 Parent=GSCOCT00033003001 | |
| 56229 chr11 manual_curation CDS 6831372 6831918 . + 2 Parent=GSCOCT00033003001 | |
| 56230 chr11 manual_curation CDS 6831060 6831175 . + 0 Parent=GSCOCT00033003001 | |
| 56231 chr11 manual_curation gene 6837438 6840551 . + . ID=GSCOCG00033002001;Name=Cc11_g02260 | |
| 56232 chr11 manual_curation mRNA 6837438 6840551 . + . ID=GSCOCT00033002001;Parent=GSCOCG00033002001;Name=Cc11_g02260 | |
| 56233 chr11 manual_curation polypeptide 6839117 6840130 . + . ID=GSCOCP00033002001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019775,InterPro:IPR019781,InterPro:IPR019782,InterPro:IPR020472,PFAM:PF00400,PRINTS:PR00320,PROFILE:PS50082,PROFILE:PS50294,PROSITE:PS00678,SMART:SM00320,SUPERFAMILY:SSF50978,SwissProt:Q2HJH6,SwissProt:Q6PE01,SwissProt:Q96DI7,TAIR:AT2G43770.1,TAIR:AT3G49660.1,TAIR:AT4G02730.1,TrEMBL:C6TJP9,TrEMBL:F6HB26,TrEMBL:I1N8B6;Derives_from=GSCOCT00033002001;Name=Cc11_g02260;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.7.11.7,PRODUCT:U5 small nuclear ribonucleoprotein 40 kDa protein,CC_functional_completeness:complete,CC_gene:SNRNP40,CC_gene:Snrnp40;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033002001~ U5 small nuclear ribonucleoprotein 40 kDa protein~ SNRNP40~ complete;original_location=complement(1307618..1308631);owner=coffea | |
| 56234 chr11 manual_curation exon 6837438 6837577 . + . Parent=GSCOCT00033002001 | |
| 56235 chr11 manual_curation exon 6839068 6840551 . + . Parent=GSCOCT00033002001 | |
| 56236 chr11 manual_curation CDS 6839117 6840130 . + 0 Parent=GSCOCT00033002001 | |
| 56237 chr11 manual_curation gene 6937444 6943768 . + . ID=GSCOCG00033000001;Name=Cc11_g02270 | |
| 56238 chr11 manual_curation mRNA 6937444 6943768 . + . ID=GSCOCT00033000001;Parent=GSCOCG00033000001;Name=Cc11_g02270 | |
| 56239 chr11 manual_curation polypeptide 6937444 6943768 . + . ID=GSCOCP00033000001;Dbxref=InterPro:IPR001563,InterPro:IPR018202,PANTHER:PTHR11802,PFAM:PF00450,PRINTS:PR00724,PROSITE:PS00131,SwissProt:P55748,SwissProt:Q949Q7,SwissProt:Q9ZQQ0,TAIR:AT2G35780.1,TAIR:AT3G07990.1,TAIR:AT4G30810.1,TrEMBL:B9SQY4,TrEMBL:D7U1F7,TrEMBL:D7U1G2;Derives_from=GSCOCT00033000001;Name=Cc11_g02270;Ontology_term=CC_evidence_code:ISS,GO:0004185,GO:0006508,CC_EC_number:3.4.16.6,PRODUCT:Serine carboxypeptidase-like 29,CC_functional_completeness:complete,CC_gene:SCPL29,CC_gene:CXP%3B2-2,CC_gene:SCPL26;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033000001~ Serine carboxypeptidase-like 29~ SCPL29~ complete;original_location=complement(join(1209977..1210304%2C1209052..1209159%2C1208733..1208828%2C1208526..1208618%2C1207673..1207755%2C1206878..1207144%2C1205894..1206018%2C1205339..1205434%2C1204844..1204949%2C1203980..1204141));owner=coffea | |
| 56240 chr11 manual_curation exon 6943607 6943768 . + . Parent=GSCOCT00033000001 | |
| 56241 chr11 manual_curation exon 6942799 6942904 . + . Parent=GSCOCT00033000001 | |
| 56242 chr11 manual_curation exon 6942314 6942409 . + . Parent=GSCOCT00033000001 | |
| 56243 chr11 manual_curation exon 6941730 6941854 . + . Parent=GSCOCT00033000001 | |
| 56244 chr11 manual_curation exon 6940604 6940870 . + . Parent=GSCOCT00033000001 | |
| 56245 chr11 manual_curation exon 6939993 6940075 . + . Parent=GSCOCT00033000001 | |
| 56246 chr11 manual_curation exon 6939130 6939222 . + . Parent=GSCOCT00033000001 | |
| 56247 chr11 manual_curation exon 6938920 6939015 . + . Parent=GSCOCT00033000001 | |
| 56248 chr11 manual_curation exon 6938589 6938696 . + . Parent=GSCOCT00033000001 | |
| 56249 chr11 manual_curation exon 6937444 6937771 . + . Parent=GSCOCT00033000001 | |
| 56250 chr11 manual_curation CDS 6943607 6943768 . + 0 Parent=GSCOCT00033000001 | |
| 56251 chr11 manual_curation CDS 6942799 6942904 . + 2 Parent=GSCOCT00033000001 | |
| 56252 chr11 manual_curation CDS 6942314 6942409 . + 2 Parent=GSCOCT00033000001 | |
| 56253 chr11 manual_curation CDS 6941730 6941854 . + 0 Parent=GSCOCT00033000001 | |
| 56254 chr11 manual_curation CDS 6940604 6940870 . + 0 Parent=GSCOCT00033000001 | |
| 56255 chr11 manual_curation CDS 6939993 6940075 . + 1 Parent=GSCOCT00033000001 | |
| 56256 chr11 manual_curation CDS 6939130 6939222 . + 1 Parent=GSCOCT00033000001 | |
| 56257 chr11 manual_curation CDS 6938920 6939015 . + 1 Parent=GSCOCT00033000001 | |
| 56258 chr11 manual_curation CDS 6938589 6938696 . + 1 Parent=GSCOCT00033000001 | |
| 56259 chr11 manual_curation CDS 6937444 6937771 . + 0 Parent=GSCOCT00033000001 | |
| 56260 chr11 manual_curation gene 6947960 6961018 . - . ID=GSCOCG00032997001;Name=Cc11_g02280 | |
| 56261 chr11 manual_curation mRNA 6947960 6961018 . - . ID=GSCOCT00032997001;Parent=GSCOCG00032997001;Name=Cc11_g02280 | |
| 56262 chr11 manual_curation polypeptide 6948722 6960928 . - . ID=GSCOCP00032997001;Dbxref=InterPro:IPR002860,InterPro:IPR006311,InterPro:IPR016705,PFAM:PF02012,PIR:PIRSF017875,SwissProt:O82660,SwissProt:Q5Z5A8,SwissProt:Q9AW48,TAIR:AT5G23120.1,TIGRFAMs:TIGR01409,TrEMBL:D7T9G8,TrEMBL:G7JPH8,TrEMBL:I1LPJ4;Derives_from=GSCOCT00032997001;Name=Cc11_g02280;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Photosystem II stability/assembly factor HCF136%2C chloroplastic,CC_functional_completeness:complete,CC_gene:HCF136,CC_gene:hcf136;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032997001~ Photosystem II stability/assembly factor HCF136%2C chloroplastic~ HCF136~ complete;original_location=join(1186820..1187174%2C1188893..1189128%2C1191636..1191766%2C1193083..1193215%2C1193403..1193525%2C1195920..1195994%2C1198458..1198573%2C1198960..1199026);owner=coffea | |
| 56263 chr11 manual_curation exon 6960574 6961018 . - . Parent=GSCOCT00032997001 | |
| 56264 chr11 manual_curation exon 6958620 6958855 . - . Parent=GSCOCT00032997001 | |
| 56265 chr11 manual_curation exon 6955982 6956112 . - . Parent=GSCOCT00032997001 | |
| 56266 chr11 manual_curation exon 6954533 6954665 . - . Parent=GSCOCT00032997001 | |
| 56267 chr11 manual_curation exon 6954223 6954345 . - . Parent=GSCOCT00032997001 | |
| 56268 chr11 manual_curation exon 6951754 6951828 . - . Parent=GSCOCT00032997001 | |
| 56269 chr11 manual_curation exon 6949175 6949290 . - . Parent=GSCOCT00032997001 | |
| 56270 chr11 manual_curation exon 6947960 6948788 . - . Parent=GSCOCT00032997001 | |
| 56271 chr11 manual_curation CDS 6960574 6960928 . - 0 Parent=GSCOCT00032997001 | |
| 56272 chr11 manual_curation CDS 6958620 6958855 . - 1 Parent=GSCOCT00032997001 | |
| 56273 chr11 manual_curation CDS 6955982 6956112 . - 0 Parent=GSCOCT00032997001 | |
| 56274 chr11 manual_curation CDS 6954533 6954665 . - 2 Parent=GSCOCT00032997001 | |
| 56275 chr11 manual_curation CDS 6954223 6954345 . - 0 Parent=GSCOCT00032997001 | |
| 56276 chr11 manual_curation CDS 6951754 6951828 . - 0 Parent=GSCOCT00032997001 | |
| 56277 chr11 manual_curation CDS 6949175 6949290 . - 0 Parent=GSCOCT00032997001 | |
| 56278 chr11 manual_curation CDS 6948722 6948788 . - 2 Parent=GSCOCT00032997001 | |
| 56279 chr11 manual_curation gene 7107914 7111789 . + . ID=GSCOCG00032994001;Name=Cc11_g02290 | |
| 56280 chr11 manual_curation mRNA 7107914 7111789 . + . ID=GSCOCT00032994001;Parent=GSCOCG00032994001;Name=Cc11_g02290 | |
| 56281 chr11 manual_curation polypeptide 7107952 7111349 . + . ID=GSCOCP00032994001;Dbxref=InterPro:IPR002482,InterPro:IPR018392,PFAM:PF01476,SMART:SM00257,TAIR:AT5G08200.1,TAIR:AT5G23130.1,TrEMBL:A9PH52,TrEMBL:B9I4Z1,TrEMBL:D7T9H0;Derives_from=GSCOCT00032994001;Name=Cc11_g02290;Ontology_term=CC_evidence_code:ISS,GO:0016998,CC_EC_number:missing_EC_number,PRODUCT:Peptidoglycan-binding LysM domain-containing protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032994001~ Peptidoglycan-binding LysM domain-containing protein~ unknown_gene~ complete;original_location=complement(join(1039557..1039796%2C1038584..1038714%2C1036399..1037209));owner=coffea | |
| 56282 chr11 manual_curation exon 7110539 7111789 . + . Parent=GSCOCT00032994001 | |
| 56283 chr11 manual_curation exon 7109034 7109164 . + . Parent=GSCOCT00032994001 | |
| 56284 chr11 manual_curation exon 7107914 7108191 . + . Parent=GSCOCT00032994001 | |
| 56285 chr11 manual_curation CDS 7110539 7111349 . + 2 Parent=GSCOCT00032994001 | |
| 56286 chr11 manual_curation CDS 7109034 7109164 . + 0 Parent=GSCOCT00032994001 | |
| 56287 chr11 manual_curation CDS 7107952 7108191 . + 0 Parent=GSCOCT00032994001 | |
| 56288 chr11 manual_curation gene 7173732 7175908 . - . ID=GSCOCG00032992001;Name=Cc11_g02300 | |
| 56289 chr11 manual_curation mRNA 7173732 7175908 . - . ID=GSCOCT00032992001;Parent=GSCOCG00032992001;Name=Cc11_g02300 | |
| 56290 chr11 manual_curation polypeptide 7173971 7175204 . - . ID=GSCOCP00032992001;Derives_from=GSCOCT00032992001;Name=Cc11_g02300;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032992001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(972544..972655%2C972758..972814%2C973698..973777);owner=coffea | |
| 56291 chr11 manual_curation exon 7175093 7175908 . - . Parent=GSCOCT00032992001 | |
| 56292 chr11 manual_curation exon 7174934 7174990 . - . Parent=GSCOCT00032992001 | |
| 56293 chr11 manual_curation exon 7173732 7174050 . - . Parent=GSCOCT00032992001 | |
| 56294 chr11 manual_curation CDS 7175093 7175204 . - 0 Parent=GSCOCT00032992001 | |
| 56295 chr11 manual_curation CDS 7174934 7174990 . - 1 Parent=GSCOCT00032992001 | |
| 56296 chr11 manual_curation CDS 7173971 7174050 . - 1 Parent=GSCOCT00032992001 | |
| 56297 chr11 manual_curation gene 7176463 7180636 . - . ID=GSCOCG00032991001;Name=Cc11_g02310 | |
| 56298 chr11 manual_curation mRNA 7176463 7180636 . - . ID=GSCOCT00032991001;Parent=GSCOCG00032991001;Name=Cc11_g02310 | |
| 56299 chr11 manual_curation polypeptide 7177670 7179625 . - . ID=GSCOCP00032991001;Derives_from=GSCOCT00032991001;Name=Cc11_g02310;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032991001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(968123..968224%2C969980..970078);owner=coffea | |
| 56300 chr11 manual_curation exon 7179524 7180636 . - . Parent=GSCOCT00032991001 | |
| 56301 chr11 manual_curation exon 7176463 7177768 . - . Parent=GSCOCT00032991001 | |
| 56302 chr11 manual_curation CDS 7179524 7179625 . - 0 Parent=GSCOCT00032991001 | |
| 56303 chr11 manual_curation CDS 7177670 7177768 . - 0 Parent=GSCOCT00032991001 | |
| 56304 chr11 manual_curation gene 7184524 7199806 . - . ID=GSCOCG00032989001;Name=Cc11_g02320 | |
| 56305 chr11 manual_curation mRNA 7184524 7199806 . - . ID=GSCOCT00032989001;Parent=GSCOCG00032989001;Name=Cc11_g02320 | |
| 56306 chr11 manual_curation polypeptide 7186077 7199451 . - . ID=GSCOCP00032989001;Dbxref=InterPro:IPR000313,InterPro:IPR006569,PFAM:PF00855,PROFILE:PS50812,PROFILE:PS51391,SMART:SM00293,SMART:SM00582,TAIR:AT3G63070.1,TAIR:AT5G08230.1,TAIR:AT5G23150.1,TrEMBL:B9S4K0,TrEMBL:F6HF48,TrEMBL:I1LPJ1;Derives_from=GSCOCT00032989001;Name=Cc11_g02320;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032989001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(948297..948443%2C949447..949523%2C951758..953635%2C953725..954238%2C956773..956881%2C957169..957281%2C957379..957566%2C958760..959462%2C959577..960135%2C961405..961500%2C961604..961671);owner=coffea | |
| 56307 chr11 manual_curation exon 7184524 7184819 . - . Parent=GSCOCT00032989001 | |
| 56308 chr11 manual_curation exon 7199305 7199806 . - . Parent=GSCOCT00032989001 | |
| 56309 chr11 manual_curation exon 7198225 7198301 . - . Parent=GSCOCT00032989001 | |
| 56310 chr11 manual_curation exon 7194113 7195990 . - . Parent=GSCOCT00032989001 | |
| 56311 chr11 manual_curation exon 7193510 7194023 . - . Parent=GSCOCT00032989001 | |
| 56312 chr11 manual_curation exon 7190867 7190975 . - . Parent=GSCOCT00032989001 | |
| 56313 chr11 manual_curation exon 7190467 7190579 . - . Parent=GSCOCT00032989001 | |
| 56314 chr11 manual_curation exon 7190182 7190369 . - . Parent=GSCOCT00032989001 | |
| 56315 chr11 manual_curation exon 7188286 7188988 . - . Parent=GSCOCT00032989001 | |
| 56316 chr11 manual_curation exon 7187613 7188171 . - . Parent=GSCOCT00032989001 | |
| 56317 chr11 manual_curation exon 7186248 7186343 . - . Parent=GSCOCT00032989001 | |
| 56318 chr11 manual_curation exon 7186052 7186144 . - . Parent=GSCOCT00032989001 | |
| 56319 chr11 manual_curation CDS 7199305 7199451 . - 0 Parent=GSCOCT00032989001 | |
| 56320 chr11 manual_curation CDS 7198225 7198301 . - 0 Parent=GSCOCT00032989001 | |
| 56321 chr11 manual_curation CDS 7194113 7195990 . - 2 Parent=GSCOCT00032989001 | |
| 56322 chr11 manual_curation CDS 7193510 7194023 . - 2 Parent=GSCOCT00032989001 | |
| 56323 chr11 manual_curation CDS 7190867 7190975 . - 0 Parent=GSCOCT00032989001 | |
| 56324 chr11 manual_curation CDS 7190467 7190579 . - 1 Parent=GSCOCT00032989001 | |
| 56325 chr11 manual_curation CDS 7190182 7190369 . - 0 Parent=GSCOCT00032989001 | |
| 56326 chr11 manual_curation CDS 7188286 7188988 . - 2 Parent=GSCOCT00032989001 | |
| 56327 chr11 manual_curation CDS 7187613 7188171 . - 0 Parent=GSCOCT00032989001 | |
| 56328 chr11 manual_curation CDS 7186248 7186343 . - 1 Parent=GSCOCT00032989001 | |
| 56329 chr11 manual_curation CDS 7186077 7186144 . - 1 Parent=GSCOCT00032989001 | |
| 56330 chr11 manual_curation gene 7253490 7264137 . - . ID=GSCOCG00032988001;Name=Cc11_g02330 | |
| 56331 chr11 manual_curation mRNA 7253490 7264137 . - . ID=GSCOCT00032988001;Parent=GSCOCG00032988001;Name=Cc11_g02330 | |
| 56332 chr11 manual_curation polypeptide 7253806 7263787 . - . ID=GSCOCP00032988001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR001876,InterPro:IPR012677,PFAM:PF00076,PFAM:PF00641,PROFILE:PS50102,PROFILE:PS50199,PROSITE:PS01358,SMART:SM00360,SMART:SM00547,SwissProt:Q01844,SwissProt:Q61545,SwissProt:Q92804,TAIR:AT1G50300.1,TrEMBL:B9HY23,TrEMBL:D7TAD5,TrEMBL:I1QMS3;Derives_from=GSCOCT00032988001;Name=Cc11_g02330;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,GO:0005622,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:TBP-associated factor 15,CC_functional_completeness:complete,CC_gene:TAF15,CC_gene:EWSR1,CC_gene:Ewsr1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032988001~ TBP-associated factor 15~ TAF15~ complete;original_location=join(883961..884080%2C884192..884526%2C884666..884851%2C886318..886401%2C887820..887901%2C887982..888108%2C893701..893942);owner=coffea | |
| 56333 chr11 manual_curation exon 7264019 7264137 . - . Parent=GSCOCT00032988001 | |
| 56334 chr11 manual_curation exon 7263668 7263826 . - . Parent=GSCOCT00032988001 | |
| 56335 chr11 manual_curation exon 7263222 7263556 . - . Parent=GSCOCT00032988001 | |
| 56336 chr11 manual_curation exon 7262897 7263082 . - . Parent=GSCOCT00032988001 | |
| 56337 chr11 manual_curation exon 7261347 7261430 . - . Parent=GSCOCT00032988001 | |
| 56338 chr11 manual_curation exon 7259847 7259928 . - . Parent=GSCOCT00032988001 | |
| 56339 chr11 manual_curation exon 7259640 7259766 . - . Parent=GSCOCT00032988001 | |
| 56340 chr11 manual_curation exon 7253490 7254047 . - . Parent=GSCOCT00032988001 | |
| 56341 chr11 manual_curation CDS 7263668 7263787 . - 0 Parent=GSCOCT00032988001 | |
| 56342 chr11 manual_curation CDS 7263222 7263556 . - 0 Parent=GSCOCT00032988001 | |
| 56343 chr11 manual_curation CDS 7262897 7263082 . - 2 Parent=GSCOCT00032988001 | |
| 56344 chr11 manual_curation CDS 7261347 7261430 . - 2 Parent=GSCOCT00032988001 | |
| 56345 chr11 manual_curation CDS 7259847 7259928 . - 2 Parent=GSCOCT00032988001 | |
| 56346 chr11 manual_curation CDS 7259640 7259766 . - 0 Parent=GSCOCT00032988001 | |
| 56347 chr11 manual_curation CDS 7253806 7254047 . - 1 Parent=GSCOCT00032988001 | |
| 56348 chr11 manual_curation gene 7355423 7356101 . - . ID=GSCOCG00032987001;Name=Cc11_g02340 | |
| 56349 chr11 manual_curation mRNA 7355423 7356101 . - . ID=GSCOCT00032987001;Parent=GSCOCG00032987001;Name=Cc11_g02340 | |
| 56350 chr11 manual_curation polypeptide 7355423 7356101 . - . ID=GSCOCP00032987001;Dbxref=InterPro:IPR011009,InterPro:IPR017442,PFAM:PF00069,SUPERFAMILY:SSF56112,SwissProt:P51138,SwissProt:P51139,SwissProt:Q39019,TAIR:AT1G09840.1,TAIR:AT5G14640.1,TAIR:AT5G26751.1,TrEMBL:C0PI98,TrEMBL:C5WT17,TrEMBL:Q5XZE6;Derives_from=GSCOCT00032987001;Name=Cc11_g02340;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0005524,GO:0006468,CC_EC_number:2.7.11.26,PRODUCT:Putative Glycogen synthase kinase-3 homolog MsK-2,CC_functional_completeness:fragment,CC_gene:MSK-2,CC_gene:MSK-3,CC_gene:ASK10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032987001~ Putative Glycogen synthase kinase-3 homolog MsK-2~ MSK-2~ fragment;original_location=join(791647..791678%2C791777..791890%2C792079..792325);owner=coffea | |
| 56351 chr11 manual_curation exon 7356070 7356101 . - . Parent=GSCOCT00032987001 | |
| 56352 chr11 manual_curation exon 7355858 7355971 . - . Parent=GSCOCT00032987001 | |
| 56353 chr11 manual_curation exon 7355423 7355669 . - . Parent=GSCOCT00032987001 | |
| 56354 chr11 manual_curation CDS 7356070 7356101 . - 0 Parent=GSCOCT00032987001 | |
| 56355 chr11 manual_curation CDS 7355858 7355971 . - 2 Parent=GSCOCT00032987001 | |
| 56356 chr11 manual_curation CDS 7355423 7355669 . - 2 Parent=GSCOCT00032987001 | |
| 56357 chr11 manual_curation gene 7359626 7367494 . + . ID=GSCOCG00032984001;Name=Cc11_g02350 | |
| 56358 chr11 manual_curation mRNA 7359626 7367494 . + . ID=GSCOCT00032984001;Parent=GSCOCG00032984001;Name=Cc11_g02350 | |
| 56359 chr11 manual_curation polypeptide 7359626 7366561 . + . ID=GSCOCP00032984001;Dbxref=GENE3D:G3DSA:3.20.20.70,HAMAP:MF_00056,InterPro:IPR006218,InterPro:IPR006269,InterPro:IPR013785,PANTHER:PTHR21057:SF2,PFAM:PF00793,SwissProt:B5EPM6,SwissProt:O50044,SwissProt:Q9AV97,TAIR:AT1G16340.4,TIGRFAMs:TIGR01362,TrEMBL:C6TEV7,TrEMBL:I1L645,TrEMBL:Q9ARD1;Derives_from=GSCOCT00032984001;Name=Cc11_g02350;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005737,GO:0008152,GO:0008676,GO:0009058,CC_EC_number:2.5.1.55,PRODUCT:2-dehydro-3-deoxyphosphooctonate aldolase,CC_functional_completeness:complete,CC_gene:KDSA,CC_gene:kdsA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032984001~ 2-dehydro-3-deoxyphosphooctonate aldolase~ KDSA~ complete;original_location=complement(join(788096..788122%2C787911..787970%2C787756..787817%2C785280..785322%2C785062..785159%2C784733..784829%2C784384..784449%2C783567..783626%2C783371..783445%2C783150..783234%2C782757..782815%2C782554..782598%2C782088..782186%2C781842..781889%2C781650..781697%2C781187..781243));owner=coffea | |
| 56360 chr11 manual_curation exon 7366505 7367494 . + . Parent=GSCOCT00032984001 | |
| 56361 chr11 manual_curation exon 7366051 7366098 . + . Parent=GSCOCT00032984001 | |
| 56362 chr11 manual_curation exon 7365859 7365906 . + . Parent=GSCOCT00032984001 | |
| 56363 chr11 manual_curation exon 7365562 7365660 . + . Parent=GSCOCT00032984001 | |
| 56364 chr11 manual_curation exon 7365150 7365194 . + . Parent=GSCOCT00032984001 | |
| 56365 chr11 manual_curation exon 7364933 7364991 . + . Parent=GSCOCT00032984001 | |
| 56366 chr11 manual_curation exon 7364514 7364598 . + . Parent=GSCOCT00032984001 | |
| 56367 chr11 manual_curation exon 7364303 7364377 . + . Parent=GSCOCT00032984001 | |
| 56368 chr11 manual_curation exon 7364122 7364181 . + . Parent=GSCOCT00032984001 | |
| 56369 chr11 manual_curation exon 7363299 7363364 . + . Parent=GSCOCT00032984001 | |
| 56370 chr11 manual_curation exon 7362919 7363015 . + . Parent=GSCOCT00032984001 | |
| 56371 chr11 manual_curation exon 7362589 7362686 . + . Parent=GSCOCT00032984001 | |
| 56372 chr11 manual_curation exon 7362426 7362468 . + . Parent=GSCOCT00032984001 | |
| 56373 chr11 manual_curation exon 7359931 7359992 . + . Parent=GSCOCT00032984001 | |
| 56374 chr11 manual_curation exon 7359778 7359837 . + . Parent=GSCOCT00032984001 | |
| 56375 chr11 manual_curation exon 7359626 7359652 . + . Parent=GSCOCT00032984001 | |
| 56376 chr11 manual_curation CDS 7366505 7366561 . + 0 Parent=GSCOCT00032984001 | |
| 56377 chr11 manual_curation CDS 7366051 7366098 . + 0 Parent=GSCOCT00032984001 | |
| 56378 chr11 manual_curation CDS 7365859 7365906 . + 0 Parent=GSCOCT00032984001 | |
| 56379 chr11 manual_curation CDS 7365562 7365660 . + 0 Parent=GSCOCT00032984001 | |
| 56380 chr11 manual_curation CDS 7365150 7365194 . + 0 Parent=GSCOCT00032984001 | |
| 56381 chr11 manual_curation CDS 7364933 7364991 . + 1 Parent=GSCOCT00032984001 | |
| 56382 chr11 manual_curation CDS 7364514 7364598 . + 0 Parent=GSCOCT00032984001 | |
| 56383 chr11 manual_curation CDS 7364303 7364377 . + 0 Parent=GSCOCT00032984001 | |
| 56384 chr11 manual_curation CDS 7364122 7364181 . + 0 Parent=GSCOCT00032984001 | |
| 56385 chr11 manual_curation CDS 7363299 7363364 . + 0 Parent=GSCOCT00032984001 | |
| 56386 chr11 manual_curation CDS 7362919 7363015 . + 2 Parent=GSCOCT00032984001 | |
| 56387 chr11 manual_curation CDS 7362589 7362686 . + 0 Parent=GSCOCT00032984001 | |
| 56388 chr11 manual_curation CDS 7362426 7362468 . + 2 Parent=GSCOCT00032984001 | |
| 56389 chr11 manual_curation CDS 7359931 7359992 . + 0 Parent=GSCOCT00032984001 | |
| 56390 chr11 manual_curation CDS 7359778 7359837 . + 0 Parent=GSCOCT00032984001 | |
| 56391 chr11 manual_curation CDS 7359626 7359652 . + 0 Parent=GSCOCT00032984001 | |
| 56392 chr11 manual_curation gene 7373458 7381840 . - . ID=GSCOCG00032983001;Name=Cc11_g02360 | |
| 56393 chr11 manual_curation mRNA 7373458 7381840 . - . ID=GSCOCT00032983001;Parent=GSCOCG00032983001;Name=Cc11_g02360 | |
| 56394 chr11 manual_curation polypeptide 7379023 7381553 . - . ID=GSCOCP00032983001;Dbxref=InterPro:IPR001907,InterPro:IPR018215,PANTHER:PTHR10381,PFAM:PF00574,PRINTS:PR00127,PROSITE:PS00381,PROSITE:PS00382,SwissProt:A1USA7,SwissProt:Q6G178,SwissProt:Q9FN42,TAIR:AT1G02560.1,TAIR:AT1G66670.1,TAIR:AT5G23140.1,TrEMBL:A9P953,TrEMBL:B9HGL6,TrEMBL:I1LPJ0;Derives_from=GSCOCT00032983001;Name=Cc11_g02360;Ontology_term=CC_evidence_code:ISS,GO:0004252,GO:0006508,CC_EC_number:3.4.21.92,PRODUCT:ATP-dependent Clp protease proteolytic subunit 2%2C mitochondrial,CC_functional_completeness:complete,CC_gene:CLPP2,CC_gene:clpP;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032983001~ ATP-dependent Clp protease proteolytic subunit 2%2C mitochondrial~ CLPP2~ complete;original_location=join(766195..766399%2C768325..768725);owner=coffea | |
| 56395 chr11 manual_curation exon 7373458 7373851 . - . Parent=GSCOCT00032983001 | |
| 56396 chr11 manual_curation exon 7381349 7381840 . - . Parent=GSCOCT00032983001 | |
| 56397 chr11 manual_curation exon 7379011 7379423 . - . Parent=GSCOCT00032983001 | |
| 56398 chr11 manual_curation CDS 7381349 7381553 . - 0 Parent=GSCOCT00032983001 | |
| 56399 chr11 manual_curation CDS 7379023 7379423 . - 1 Parent=GSCOCT00032983001 | |
| 56400 chr11 manual_curation gene 7491526 7495901 . - . ID=GSCOCG00032980001;Name=Cc11_g02370 | |
| 56401 chr11 manual_curation mRNA 7491526 7495901 . - . ID=GSCOCT00032980001;Parent=GSCOCG00032980001;Name=Cc11_g02370 | |
| 56402 chr11 manual_curation polypeptide 7491526 7495901 . - . ID=GSCOCP00032980001;Dbxref=TAIR:AT1G02960.2,TrEMBL:A5AFE7,TrEMBL:B9T0U5,TrEMBL:G7J847;Derives_from=GSCOCT00032980001;Name=Cc11_g02370;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032980001~ Putative unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02965.1)%3B Has 100 Blast hits to 99 proteins in 48 species: Archae - 0%3B Bacteria - 4%3B Metazoa - 26%3B Fungi - 13%3B Plants - 29%3B Viruses - 0%3B Other Eukaryotes - 28 (source: NCBI BLink).~ unknown_gene~ modules;original_location=join(651847..651907%2C651999..652072%2C652171..652216%2C652330..652379%2C652911..653087%2C653218..653356%2C653718..654049%2C654131..654250%2C654326..654453%2C654558..654683%2C654738..654843%2C655519..655652%2C656150..656222);owner=coffea | |
| 56403 chr11 manual_curation exon 7495841 7495901 . - . Parent=GSCOCT00032980001 | |
| 56404 chr11 manual_curation exon 7495676 7495749 . - . Parent=GSCOCT00032980001 | |
| 56405 chr11 manual_curation exon 7495532 7495577 . - . Parent=GSCOCT00032980001 | |
| 56406 chr11 manual_curation exon 7495369 7495418 . - . Parent=GSCOCT00032980001 | |
| 56407 chr11 manual_curation exon 7494661 7494837 . - . Parent=GSCOCT00032980001 | |
| 56408 chr11 manual_curation exon 7494392 7494530 . - . Parent=GSCOCT00032980001 | |
| 56409 chr11 manual_curation exon 7493699 7494030 . - . Parent=GSCOCT00032980001 | |
| 56410 chr11 manual_curation exon 7493498 7493617 . - . Parent=GSCOCT00032980001 | |
| 56411 chr11 manual_curation exon 7493295 7493422 . - . Parent=GSCOCT00032980001 | |
| 56412 chr11 manual_curation exon 7493065 7493190 . - . Parent=GSCOCT00032980001 | |
| 56413 chr11 manual_curation exon 7492905 7493010 . - . Parent=GSCOCT00032980001 | |
| 56414 chr11 manual_curation exon 7492096 7492229 . - . Parent=GSCOCT00032980001 | |
| 56415 chr11 manual_curation exon 7491526 7491598 . - . Parent=GSCOCT00032980001 | |
| 56416 chr11 manual_curation CDS 7495841 7495901 . - 0 Parent=GSCOCT00032980001 | |
| 56417 chr11 manual_curation CDS 7495676 7495749 . - 1 Parent=GSCOCT00032980001 | |
| 56418 chr11 manual_curation CDS 7495532 7495577 . - 0 Parent=GSCOCT00032980001 | |
| 56419 chr11 manual_curation CDS 7495369 7495418 . - 1 Parent=GSCOCT00032980001 | |
| 56420 chr11 manual_curation CDS 7494661 7494837 . - 0 Parent=GSCOCT00032980001 | |
| 56421 chr11 manual_curation CDS 7494392 7494530 . - 0 Parent=GSCOCT00032980001 | |
| 56422 chr11 manual_curation CDS 7493699 7494030 . - 1 Parent=GSCOCT00032980001 | |
| 56423 chr11 manual_curation CDS 7493498 7493617 . - 0 Parent=GSCOCT00032980001 | |
| 56424 chr11 manual_curation CDS 7493295 7493422 . - 0 Parent=GSCOCT00032980001 | |
| 56425 chr11 manual_curation CDS 7493065 7493190 . - 2 Parent=GSCOCT00032980001 | |
| 56426 chr11 manual_curation CDS 7492905 7493010 . - 2 Parent=GSCOCT00032980001 | |
| 56427 chr11 manual_curation CDS 7492096 7492229 . - 0 Parent=GSCOCT00032980001 | |
| 56428 chr11 manual_curation CDS 7491526 7491598 . - 2 Parent=GSCOCT00032980001 | |
| 56429 chr11 manual_curation gene 7576344 7577120 . - . ID=GSCOCG00032976001;Name=Cc11_g02380 | |
| 56430 chr11 manual_curation mRNA 7576344 7577120 . - . ID=GSCOCT00032976001;Parent=GSCOCG00032976001;Name=Cc11_g02380 | |
| 56431 chr11 manual_curation polypeptide 7576344 7577120 . - . ID=GSCOCP00032976001;Dbxref=InterPro:IPR008545,PFAM:PF05701,TrEMBL:B9H6E2,TrEMBL:B9S8J8,TrEMBL:G7LGD3;Derives_from=GSCOCT00032976001;Name=Cc11_g02380;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Predicted protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032976001~ Predicted protein~ unknown_gene~ fragment;original_location=570628..571404;owner=coffea | |
| 56432 chr11 manual_curation exon 7576344 7577120 . - . Parent=GSCOCT00032976001 | |
| 56433 chr11 manual_curation CDS 7576344 7577120 . - 0 Parent=GSCOCT00032976001 | |
| 56434 chr11 manual_curation gene 7594922 7601133 . - . ID=GSCOCG00032974001;Name=Cc11_g02390 | |
| 56435 chr11 manual_curation mRNA 7594922 7601133 . - . ID=GSCOCT00032974001;Parent=GSCOCG00032974001;Name=Cc11_g02390 | |
| 56436 chr11 manual_curation polypeptide 7595076 7599866 . - . ID=GSCOCP00032974001;Dbxref=InterPro:IPR004843,InterPro:IPR011230,PFAM:PF00149,PIR:PIRSF030250,SwissProt:Q84LR6,SwissProt:Q9FMK9,SwissProt:Q9LU72,TAIR:AT2G46880.1,TAIR:AT5G57140.1,TAIR:AT5G63140.1,TrEMBL:A9PC41,TrEMBL:B9I975,TrEMBL:F6I308;Derives_from=GSCOCT00032974001;Name=Cc11_g02390;Ontology_term=CC_evidence_code:ISS,GO:0016787,CC_EC_number:missing_EC_number,PRODUCT:Probable inactive purple acid phosphatase 29,CC_functional_completeness:complete,CC_gene:PAP29,CC_gene:PAP14,CC_gene:PAP28;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032974001~ Probable inactive purple acid phosphatase 29~ PAP29~ complete;original_location=join(547882..548137%2C551001..551395%2C551517..551961%2C552638..552672);owner=coffea | |
| 56437 chr11 manual_curation exon 7599611 7601133 . - . Parent=GSCOCT00032974001 | |
| 56438 chr11 manual_curation exon 7596353 7596747 . - . Parent=GSCOCT00032974001 | |
| 56439 chr11 manual_curation exon 7595787 7596231 . - . Parent=GSCOCT00032974001 | |
| 56440 chr11 manual_curation exon 7594922 7595110 . - . Parent=GSCOCT00032974001 | |
| 56441 chr11 manual_curation CDS 7599611 7599866 . - 0 Parent=GSCOCT00032974001 | |
| 56442 chr11 manual_curation CDS 7596353 7596747 . - 1 Parent=GSCOCT00032974001 | |
| 56443 chr11 manual_curation CDS 7595787 7596231 . - 0 Parent=GSCOCT00032974001 | |
| 56444 chr11 manual_curation CDS 7595076 7595110 . - 1 Parent=GSCOCT00032974001 | |
| 56445 chr11 manual_curation gene 7667188 7668792 . - . ID=GSCOCG00032972001;Name=Cc11_g02400 | |
| 56446 chr11 manual_curation mRNA 7667188 7668792 . - . ID=GSCOCT00032972001;Parent=GSCOCG00032972001;Name=Cc11_g02400 | |
| 56447 chr11 manual_curation polypeptide 7667215 7668792 . - . ID=GSCOCP00032972001;Dbxref=SwissProt:Q9FMY4,TAIR:AT5G08240.1,TAIR:AT5G23160.1,TrEMBL:B9H5R9,TrEMBL:B9HGL4,TrEMBL:B9SCQ1;Derives_from=GSCOCT00032972001;Name=Cc11_g02400;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Predicted protein,CC_functional_completeness:complete,CC_gene:At5g23160;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032972001~ Putative Predicted protein~ At5g23160~ complete;original_location=join(478956..479342%2C479979..480533);owner=coffea | |
| 56448 chr11 manual_curation exon 7668406 7668792 . - . Parent=GSCOCT00032972001 | |
| 56449 chr11 manual_curation exon 7667188 7667769 . - . Parent=GSCOCT00032972001 | |
| 56450 chr11 manual_curation CDS 7668406 7668792 . - 0 Parent=GSCOCT00032972001 | |
| 56451 chr11 manual_curation CDS 7667215 7667769 . - 0 Parent=GSCOCT00032972001 | |
| 56452 chr11 manual_curation gene 7836287 7884378 . - . ID=GSCOCG00032970001;Name=Cc11_g02410 | |
| 56453 chr11 manual_curation mRNA 7836287 7884378 . - . ID=GSCOCT00032970001;Parent=GSCOCG00032970001;Name=Cc11_g02410 | |
| 56454 chr11 manual_curation polypeptide 7836641 7884025 . - . ID=GSCOCP00032970001;Dbxref=InterPro:IPR001841,InterPro:IPR003594,PROFILE:PS50089,SMART:SM00184,SUPERFAMILY:SSF55874,SwissProt:Q9JLC8,SwissProt:Q9NZJ4,TAIR:AT5G23110.1,TrEMBL:B9SMC2,TrEMBL:D7M1M9,TrEMBL:Q9FN44;Derives_from=GSCOCT00032970001;Name=Cc11_g02410;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0005524,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative Sacsin,CC_functional_completeness:complete,CC_gene:Sacs,CC_gene:SACS;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032970001~ Putative Sacsin~ Sacs~ complete;original_location=join(263723..264096%2C268155..268881%2C269547..275539%2C276749..278253%2C279086..279349%2C282211..282431%2C284135..284406%2C287939..290978%2C291696..291828%2C299163..299677%2C299813..300709%2C302105..302284%2C310910..311107);owner=coffea | |
| 56455 chr11 manual_curation exon 7883652 7884378 . - . Parent=GSCOCT00032970001 | |
| 56456 chr11 manual_curation exon 7878867 7879593 . - . Parent=GSCOCT00032970001 | |
| 56457 chr11 manual_curation exon 7872209 7878201 . - . Parent=GSCOCT00032970001 | |
| 56458 chr11 manual_curation exon 7869495 7870999 . - . Parent=GSCOCT00032970001 | |
| 56459 chr11 manual_curation exon 7868399 7868662 . - . Parent=GSCOCT00032970001 | |
| 56460 chr11 manual_curation exon 7865317 7865537 . - . Parent=GSCOCT00032970001 | |
| 56461 chr11 manual_curation exon 7863342 7863613 . - . Parent=GSCOCT00032970001 | |
| 56462 chr11 manual_curation exon 7856770 7859809 . - . Parent=GSCOCT00032970001 | |
| 56463 chr11 manual_curation exon 7855920 7856052 . - . Parent=GSCOCT00032970001 | |
| 56464 chr11 manual_curation exon 7848071 7848585 . - . Parent=GSCOCT00032970001 | |
| 56465 chr11 manual_curation exon 7847039 7847935 . - . Parent=GSCOCT00032970001 | |
| 56466 chr11 manual_curation exon 7845464 7845643 . - . Parent=GSCOCT00032970001 | |
| 56467 chr11 manual_curation exon 7836287 7836838 . - . Parent=GSCOCT00032970001 | |
| 56468 chr11 manual_curation CDS 7883652 7884025 . - 0 Parent=GSCOCT00032970001 | |
| 56469 chr11 manual_curation CDS 7878867 7879593 . - 2 Parent=GSCOCT00032970001 | |
| 56470 chr11 manual_curation CDS 7872209 7878201 . - 0 Parent=GSCOCT00032970001 | |
| 56471 chr11 manual_curation CDS 7869495 7870999 . - 2 Parent=GSCOCT00032970001 | |
| 56472 chr11 manual_curation CDS 7868399 7868662 . - 1 Parent=GSCOCT00032970001 | |
| 56473 chr11 manual_curation CDS 7865317 7865537 . - 1 Parent=GSCOCT00032970001 | |
| 56474 chr11 manual_curation CDS 7863342 7863613 . - 0 Parent=GSCOCT00032970001 | |
| 56475 chr11 manual_curation CDS 7856770 7859809 . - 2 Parent=GSCOCT00032970001 | |
| 56476 chr11 manual_curation CDS 7855920 7856052 . - 0 Parent=GSCOCT00032970001 | |
| 56477 chr11 manual_curation CDS 7848071 7848585 . - 1 Parent=GSCOCT00032970001 | |
| 56478 chr11 manual_curation CDS 7847039 7847935 . - 0 Parent=GSCOCT00032970001 | |
| 56479 chr11 manual_curation CDS 7845464 7845643 . - 0 Parent=GSCOCT00032970001 | |
| 56480 chr11 manual_curation CDS 7836641 7836838 . - 0 Parent=GSCOCT00032970001 | |
| 56481 chr11 manual_curation gene 7907357 7915953 . + . ID=GSCOCG00032969001;Name=Cc11_g02420 | |
| 56482 chr11 manual_curation mRNA 7907357 7915953 . + . ID=GSCOCT00032969001;Parent=GSCOCG00032969001;Name=Cc11_g02420 | |
| 56483 chr11 manual_curation polypeptide 7908056 7915065 . + . ID=GSCOCP00032969001;Dbxref=InterPro:IPR003607,InterPro:IPR006674,PFAM:PF01966,SMART:SM00471,SwissProt:P54168,TAIR:AT1G17330.1,TrEMBL:A5C8X7,TrEMBL:C6T179,TrEMBL:Q8GUM8;Derives_from=GSCOCT00032969001;Name=Cc11_g02420;Ontology_term=CC_evidence_code:ISS,GO:0003824,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized protein ypgQ,CC_functional_completeness:modules,CC_gene:ypgQ;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032969001~ Putative Uncharacterized protein ypgQ~ ypgQ~ modules;original_location=complement(join(239659..239692%2C239459..239509%2C238911..239140%2C236175..236205%2C235744..235762%2C235445..235542%2C233656..233754%2C233043..233215%2C232683..232769));owner=coffea | |
| 56484 chr11 manual_curation exon 7907357 7907587 . + . Parent=GSCOCT00032969001 | |
| 56485 chr11 manual_curation exon 7914979 7915953 . + . Parent=GSCOCT00032969001 | |
| 56486 chr11 manual_curation exon 7914533 7914705 . + . Parent=GSCOCT00032969001 | |
| 56487 chr11 manual_curation exon 7913994 7914092 . + . Parent=GSCOCT00032969001 | |
| 56488 chr11 manual_curation exon 7912206 7912303 . + . Parent=GSCOCT00032969001 | |
| 56489 chr11 manual_curation exon 7911986 7912004 . + . Parent=GSCOCT00032969001 | |
| 56490 chr11 manual_curation exon 7911543 7911573 . + . Parent=GSCOCT00032969001 | |
| 56491 chr11 manual_curation exon 7908608 7908837 . + . Parent=GSCOCT00032969001 | |
| 56492 chr11 manual_curation exon 7908239 7908289 . + . Parent=GSCOCT00032969001 | |
| 56493 chr11 manual_curation exon 7908031 7908089 . + . Parent=GSCOCT00032969001 | |
| 56494 chr11 manual_curation CDS 7914979 7915065 . + 0 Parent=GSCOCT00032969001 | |
| 56495 chr11 manual_curation CDS 7914533 7914705 . + 1 Parent=GSCOCT00032969001 | |
| 56496 chr11 manual_curation CDS 7913994 7914092 . + 1 Parent=GSCOCT00032969001 | |
| 56497 chr11 manual_curation CDS 7912206 7912303 . + 2 Parent=GSCOCT00032969001 | |
| 56498 chr11 manual_curation CDS 7911986 7912004 . + 1 Parent=GSCOCT00032969001 | |
| 56499 chr11 manual_curation CDS 7911543 7911573 . + 0 Parent=GSCOCT00032969001 | |
| 56500 chr11 manual_curation CDS 7908608 7908837 . + 1 Parent=GSCOCT00032969001 | |
| 56501 chr11 manual_curation CDS 7908239 7908289 . + 1 Parent=GSCOCT00032969001 | |
| 56502 chr11 manual_curation CDS 7908056 7908089 . + 0 Parent=GSCOCT00032969001 | |
| 56503 chr11 manual_curation gene 7916349 7919581 . - . ID=GSCOCG00032968001;Name=Cc11_g02430 | |
| 56504 chr11 manual_curation mRNA 7916349 7919581 . - . ID=GSCOCT00032968001;Parent=GSCOCG00032968001;Name=Cc11_g02430 | |
| 56505 chr11 manual_curation polypeptide 7916586 7919406 . - . ID=GSCOCP00032968001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:O23066,SwissProt:P48422,SwissProt:Q9FMY1,TAIR:AT1G24540.1,TAIR:AT5G08250.1,TAIR:AT5G23190.1,TrEMBL:A5C8X6,TrEMBL:F6HF53,TrEMBL:I1LIR9;Derives_from=GSCOCT00032968001;Name=Cc11_g02430;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.14.1,PRODUCT:Cytochrome P450 86B1,CC_functional_completeness:complete,CC_gene:CYP86B1,CC_gene:CYP86A2,CC_gene:CYP86A1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032968001~ Cytochrome P450 86B1~ CYP86B1~ complete;original_location=join(228342..229604%2C230761..231162);owner=coffea | |
| 56506 chr11 manual_curation exon 7918144 7919581 . - . Parent=GSCOCT00032968001 | |
| 56507 chr11 manual_curation exon 7916349 7916987 . - . Parent=GSCOCT00032968001 | |
| 56508 chr11 manual_curation CDS 7918144 7919406 . - 0 Parent=GSCOCT00032968001 | |
| 56509 chr11 manual_curation CDS 7916586 7916987 . - 0 Parent=GSCOCT00032968001 | |
| 56510 chr11 manual_curation gene 8054375 8054991 . + . ID=GSCOCG00032966001;Name=Cc11_g02440 | |
| 56511 chr11 manual_curation mRNA 8054375 8054991 . + . ID=GSCOCT00032966001;Parent=GSCOCG00032966001;Name=Cc11_g02440 | |
| 56512 chr11 manual_curation polypeptide 8054375 8054991 . + . ID=GSCOCP00032966001;Dbxref=InterPro:IPR006153,PFAM:PF00999,SwissProt:Q9M353,SwissProt:Q9SIT5,SwissProt:Q9SUQ7,TAIR:AT2G13620.1,TAIR:AT3G53720.1,TAIR:AT4G23700.1,TrEMBL:A2Q189,TrEMBL:F6HLG8,TrEMBL:G7KZN0;Derives_from=GSCOCT00032966001;Name=Cc11_g02440;Ontology_term=CC_evidence_code:ISS,GO:0006812,GO:0015299,GO:0016021,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Cation/H( ) antiporter 20,CC_functional_completeness:fragment,CC_gene:CHX20,CC_gene:CHX17,CC_gene:CHX15;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032966001~ Cation/H( ) antiporter 20~ CHX20~ fragment;original_location=complement(join(93276..93373%2C92757..93165));owner=coffea | |
| 56513 chr11 manual_curation exon 8054583 8054991 . + . Parent=GSCOCT00032966001 | |
| 56514 chr11 manual_curation exon 8054375 8054472 . + . Parent=GSCOCT00032966001 | |
| 56515 chr11 manual_curation CDS 8054583 8054991 . + 2 Parent=GSCOCT00032966001 | |
| 56516 chr11 manual_curation CDS 8054375 8054472 . + 0 Parent=GSCOCT00032966001 | |
| 56517 chr11 manual_curation gene 8064824 8071043 . + . ID=GSCOCG00032965001;Name=Cc11_g02450 | |
| 56518 chr11 manual_curation mRNA 8064824 8071043 . + . ID=GSCOCT00032965001;Parent=GSCOCG00032965001;Name=Cc11_g02450 | |
| 56519 chr11 manual_curation polypeptide 8064824 8071043 . + . ID=GSCOCP00032965001;Dbxref=InterPro:IPR006153,PFAM:PF00999,SwissProt:Q9FFR9,SwissProt:Q9LUN4,SwissProt:Q9M353,TAIR:AT3G17630.1,TAIR:AT3G53720.1,TAIR:AT5G41610.1,TrEMBL:A5BEW1,TrEMBL:B9SP28,TrEMBL:F6HLG7;Derives_from=GSCOCT00032965001;Name=Cc11_g02450;Ontology_term=CC_evidence_code:ISS,GO:0006812,GO:0015299,GO:0016021,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Putative Cation/H( ) antiporter 20,CC_functional_completeness:fragment,CC_gene:CHX20,CC_gene:CHX19,CC_gene:CHX18;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032965001~ Putative Cation/H( ) antiporter 20~ CHX20~ fragment;original_location=complement(join(82829..82924%2C79568..79585%2C77939..78080%2C77164..77378%2C76705..77088));owner=coffea | |
| 56520 chr11 manual_curation exon 8070660 8071043 . + . Parent=GSCOCT00032965001 | |
| 56521 chr11 manual_curation exon 8070370 8070584 . + . Parent=GSCOCT00032965001 | |
| 56522 chr11 manual_curation exon 8069668 8069809 . + . Parent=GSCOCT00032965001 | |
| 56523 chr11 manual_curation exon 8068163 8068180 . + . Parent=GSCOCT00032965001 | |
| 56524 chr11 manual_curation exon 8064824 8064919 . + . Parent=GSCOCT00032965001 | |
| 56525 chr11 manual_curation CDS 8070660 8071043 . + 0 Parent=GSCOCT00032965001 | |
| 56526 chr11 manual_curation CDS 8070370 8070584 . + 1 Parent=GSCOCT00032965001 | |
| 56527 chr11 manual_curation CDS 8069668 8069809 . + 0 Parent=GSCOCT00032965001 | |
| 56528 chr11 manual_curation CDS 8068163 8068180 . + 0 Parent=GSCOCT00032965001 | |
| 56529 chr11 manual_curation CDS 8064824 8064919 . + 0 Parent=GSCOCT00032965001 | |
| 56530 chr11 manual_curation gene 8425069 8425386 . - . ID=GSCOCG00018499001;Name=Cc11_g02460 | |
| 56531 chr11 manual_curation mRNA 8425069 8425386 . - . ID=GSCOCT00018499001;Parent=GSCOCG00018499001;Name=Cc11_g02460 | |
| 56532 chr11 manual_curation polypeptide 8425069 8425386 . - . ID=GSCOCP00018499001;Dbxref=InterPro:IPR000876,InterPro:IPR005824,InterPro:IPR013845,PANTHER:PTHR11581,PFAM:PF00467,PRODOM:PD002667,SMART:SM00739,SwissProt:P46300,SwissProt:P49204,SwissProt:Q93VH9,TAIR:AT2G17360.1,TAIR:AT5G07090.1,TAIR:AT5G58420.1,TrEMBL:C6TN03,TrEMBL:D7T4J6,TrEMBL:I1JL82;Derives_from=GSCOCT00018499001;Name=Cc11_g02460;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:40S ribosomal protein S4,CC_functional_completeness:fragment,CC_gene:RPS4,CC_gene:RPS4A,CC_gene:RPS4B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018499001~ 40S ribosomal protein S4~ RPS4~ fragment;original_location=complement(277222..277539);owner=coffea | |
| 56533 chr11 manual_curation exon 8425069 8425386 . - . Parent=GSCOCT00018499001 | |
| 56534 chr11 manual_curation CDS 8425069 8425386 . - 0 Parent=GSCOCT00018499001 | |
| 56535 chr11 manual_curation gene 8669801 8674989 . - . ID=GSCOCG00018501001;Name=Cc11_g02470 | |
| 56536 chr11 manual_curation mRNA 8669801 8674989 . - . ID=GSCOCT00018501001;Parent=GSCOCG00018501001;Name=Cc11_g02470 | |
| 56537 chr11 manual_curation polypeptide 8670595 8674989 . - . ID=GSCOCP00018501001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,InterPro:IPR021929,PFAM:PF00931,PFAM:PF12061,PRINTS:PR00364,SwissProt:Q6L3Z7,SwissProt:Q6L403,SwissProt:Q6L438,TAIR:AT1G58400.1,TAIR:AT5G43470.1,TAIR:AT5G48620.1,TrEMBL:Q96485,TrEMBL:Q9LLD0,TrEMBL:Q9LLD4;Derives_from=GSCOCT00018501001;Name=Cc11_g02470;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1B-17,CC_functional_completeness:modules,CC_gene:R1B-17,CC_gene:R1B-14,CC_gene:R1A-6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018501001~ Putative late blight resistance protein homolog R1B-17~ R1B-17~ modules;original_location=complement(join(524612..527142%2C522748..524473));owner=coffea | |
| 56538 chr11 manual_curation exon 8669801 8672320 . - . Parent=GSCOCT00018501001 | |
| 56539 chr11 manual_curation exon 8672459 8674989 . - . Parent=GSCOCT00018501001 | |
| 56540 chr11 manual_curation CDS 8670595 8672320 . - 2 Parent=GSCOCT00018501001 | |
| 56541 chr11 manual_curation CDS 8672459 8674989 . - 0 Parent=GSCOCT00018501001 | |
| 56542 chr11 manual_curation gene 8741315 8741769 . - . ID=GSCOCG00018503001;Name=Cc11_g02480 | |
| 56543 chr11 manual_curation mRNA 8741315 8741769 . - . ID=GSCOCT00018503001;Parent=GSCOCG00018503001;Name=Cc11_g02480 | |
| 56544 chr11 manual_curation polypeptide 8741315 8741769 . - . ID=GSCOCP00018503001;Derives_from=GSCOCT00018503001;Name=Cc11_g02480;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018503001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(593896..593922%2C593468..593794));owner=coffea | |
| 56545 chr11 manual_curation exon 8741315 8741641 . - . Parent=GSCOCT00018503001 | |
| 56546 chr11 manual_curation exon 8741743 8741769 . - . Parent=GSCOCT00018503001 | |
| 56547 chr11 manual_curation CDS 8741315 8741641 . - 0 Parent=GSCOCT00018503001 | |
| 56548 chr11 manual_curation CDS 8741743 8741769 . - 0 Parent=GSCOCT00018503001 | |
| 56549 chr11 manual_curation gene 8741921 8745101 . - . ID=GSCOCG00018504001;Name=Cc11_g02490 | |
| 56550 chr11 manual_curation mRNA 8741921 8745101 . - . ID=GSCOCT00018504001;Parent=GSCOCG00018504001;Name=Cc11_g02490 | |
| 56551 chr11 manual_curation polypeptide 8741921 8745101 . - . ID=GSCOCP00018504001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,InterPro:IPR021929,PFAM:PF00931,PFAM:PF12061,PRINTS:PR00364,SwissProt:Q60CZ8,SwissProt:Q6L403,SwissProt:Q6L438,TAIR:AT3G46530.1,TAIR:AT5G35450.1,TAIR:AT5G43470.1,TrEMBL:Q96485,TrEMBL:Q9LLD0,TrEMBL:Q9LLD4;Derives_from=GSCOCT00018504001;Name=Cc11_g02490;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1B-17,CC_functional_completeness:fragment,CC_gene:R1B-17,CC_gene:R1A-6,CC_gene:R1A-10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018504001~ Putative late blight resistance protein homolog R1B-17~ R1B-17~ fragment;original_location=complement(join(594556..597254%2C594074..594098));owner=coffea | |
| 56552 chr11 manual_curation exon 8741921 8741945 . - . Parent=GSCOCT00018504001 | |
| 56553 chr11 manual_curation exon 8742403 8745101 . - . Parent=GSCOCT00018504001 | |
| 56554 chr11 manual_curation CDS 8741921 8741945 . - 2 Parent=GSCOCT00018504001 | |
| 56555 chr11 manual_curation CDS 8742403 8745101 . - 0 Parent=GSCOCT00018504001 | |
| 56556 chr11 manual_curation gene 8855341 8855553 . - . ID=GSCOCG00018507001;Name=Cc11_g02500 | |
| 56557 chr11 manual_curation mRNA 8855341 8855553 . - . ID=GSCOCT00018507001;Parent=GSCOCG00018507001;Name=Cc11_g02500 | |
| 56558 chr11 manual_curation polypeptide 8855341 8855553 . - . ID=GSCOCP00018507001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR012677,InterPro:IPR012678,InterPro:IPR013025,PFAM:PF00276,SUPERFAMILY:SSF54189,SwissProt:P62750,SwissProt:P62751,SwissProt:P62752;Derives_from=GSCOCT00018507001;Name=Cc11_g02500;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:60S ribosomal protein L23a,CC_functional_completeness:fragment,CC_gene:Rpl23a,CC_gene:RPL23A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018507001~ 60S ribosomal protein L23a~ Rpl23a~ fragment;original_location=complement(707494..707706);owner=coffea | |
| 56559 chr11 manual_curation exon 8855341 8855553 . - . Parent=GSCOCT00018507001 | |
| 56560 chr11 manual_curation CDS 8855341 8855553 . - 0 Parent=GSCOCT00018507001 | |
| 56561 chr11 manual_curation gene 8855624 8857550 . + . ID=GSCOCG00018508001;Name=Cc11_g02510 | |
| 56562 chr11 manual_curation mRNA 8855624 8857550 . + . ID=GSCOCT00018508001;Parent=GSCOCG00018508001;Name=Cc11_g02510 | |
| 56563 chr11 manual_curation polypeptide 8855624 8857550 . + . ID=GSCOCP00018508001;Dbxref=TrEMBL:B9ICX6,TrEMBL:B9RBW1,TrEMBL:F6HAJ6;Derives_from=GSCOCT00018508001;Name=Cc11_g02510;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018508001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(707777..707915%2C708186..708337%2C709641..709703);owner=coffea | |
| 56564 chr11 manual_curation exon 8855624 8855762 . + . Parent=GSCOCT00018508001 | |
| 56565 chr11 manual_curation exon 8856033 8856184 . + . Parent=GSCOCT00018508001 | |
| 56566 chr11 manual_curation exon 8857488 8857550 . + . Parent=GSCOCT00018508001 | |
| 56567 chr11 manual_curation CDS 8855624 8855762 . + 0 Parent=GSCOCT00018508001 | |
| 56568 chr11 manual_curation CDS 8856033 8856184 . + 1 Parent=GSCOCT00018508001 | |
| 56569 chr11 manual_curation CDS 8857488 8857550 . + 0 Parent=GSCOCT00018508001 | |
| 56570 chr11 manual_curation gene 8881248 8883890 . - . ID=GSCOCG00018511001;Name=Cc11_g02520 | |
| 56571 chr11 manual_curation mRNA 8881248 8883890 . - . ID=GSCOCT00018511001;Parent=GSCOCG00018511001;Name=Cc11_g02520 | |
| 56572 chr11 manual_curation polypeptide 8881248 8883890 . - . ID=GSCOCP00018511001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,InterPro:IPR021929,PFAM:PF00931,PFAM:PF12061,PRINTS:PR00364,SwissProt:Q60CZ8,SwissProt:Q6L403,SwissProt:Q6L438,TAIR:AT3G46530.1,TAIR:AT3G46710.1,TAIR:AT3G46730.1,TrEMBL:Q96485,TrEMBL:Q9LLD0,TrEMBL:Q9LLD4;Derives_from=GSCOCT00018511001;Name=Cc11_g02520;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1B-17,CC_functional_completeness:fragment,CC_gene:R1B-17,CC_gene:R1A-6,CC_gene:R1A-10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018511001~ Putative late blight resistance protein homolog R1B-17~ R1B-17~ fragment;original_location=complement(join(734479..736043%2C733867..734394%2C733401..733755));owner=coffea | |
| 56573 chr11 manual_curation exon 8881248 8881602 . - . Parent=GSCOCT00018511001 | |
| 56574 chr11 manual_curation exon 8881714 8882241 . - . Parent=GSCOCT00018511001 | |
| 56575 chr11 manual_curation exon 8882326 8883890 . - . Parent=GSCOCT00018511001 | |
| 56576 chr11 manual_curation CDS 8881248 8881602 . - 2 Parent=GSCOCT00018511001 | |
| 56577 chr11 manual_curation CDS 8881714 8882241 . - 2 Parent=GSCOCT00018511001 | |
| 56578 chr11 manual_curation CDS 8882326 8883890 . - 0 Parent=GSCOCT00018511001 | |
| 56579 chr11 manual_curation gene 8915164 8916258 . + . ID=GSCOCG00018513001;Name=Cc11_g02530 | |
| 56580 chr11 manual_curation mRNA 8915164 8916258 . + . ID=GSCOCT00018513001;Parent=GSCOCG00018513001;Name=Cc11_g02530 | |
| 56581 chr11 manual_curation polypeptide 8915164 8916048 . + . ID=GSCOCP00018513001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR001223,InterPro:IPR001579,InterPro:IPR013781,InterPro:IPR017853,PFAM:PF00704,PROSITE:PS01095,SUPERFAMILY:SSF51445,SwissProt:P29024,SwissProt:P29060,SwissProt:P36910,TAIR:AT5G24090.1,TrEMBL:B9N9A2,TrEMBL:B9N9A3,TrEMBL:B9N9A4;Derives_from=GSCOCT00018513001;Name=Cc11_g02530;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0043169,CC_EC_number:3.2.1.17,PRODUCT:Acidic endochitinase,CC_functional_completeness:complete,CC_gene:SE2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018513001~ Acidic endochitinase~ SE2~ complete;original_location=767317..768201;owner=coffea | |
| 56582 chr11 manual_curation exon 8915164 8916258 . + . Parent=GSCOCT00018513001 | |
| 56583 chr11 manual_curation CDS 8915164 8916048 . + 0 Parent=GSCOCT00018513001 | |
| 56584 chr11 manual_curation gene 8920388 8921753 . + . ID=GSCOCG00018514001;Name=Cc11_g02540 | |
| 56585 chr11 manual_curation mRNA 8920388 8921753 . + . ID=GSCOCT00018514001;Parent=GSCOCG00018514001;Name=Cc11_g02540 | |
| 56586 chr11 manual_curation polypeptide 8920388 8921407 . + . ID=GSCOCP00018514001;Dbxref=InterPro:IPR000863,PFAM:PF00685,SwissProt:Q8GZ53,SwissProt:Q8L5A7,SwissProt:Q9M1V2,TAIR:AT3G45070.1,TAIR:AT5G07000.1,TAIR:AT5G07010.1,TrEMBL:A5C059,TrEMBL:F1CWB3,TrEMBL:F6HVA9;Derives_from=GSCOCT00018514001;Name=Cc11_g02540;Ontology_term=CC_evidence_code:ISS,GO:0008146,CC_EC_number:2.8.2.1,PRODUCT:Cytosolic sulfotransferase 15,CC_functional_completeness:complete,CC_gene:SOT15,CC_gene:SOT14,CC_gene:SOT5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018514001~ Cytosolic sulfotransferase 15~ SOT15~ complete;original_location=772541..773560;owner=coffea | |
| 56587 chr11 manual_curation exon 8920388 8921753 . + . Parent=GSCOCT00018514001 | |
| 56588 chr11 manual_curation CDS 8920388 8921407 . + 0 Parent=GSCOCT00018514001 | |
| 56589 chr11 manual_curation gene 8927467 8929515 . + . ID=GSCOCG00018516001;Name=Cc11_g02550 | |
| 56590 chr11 manual_curation mRNA 8927467 8929515 . + . ID=GSCOCT00018516001;Parent=GSCOCG00018516001;Name=Cc11_g02550 | |
| 56591 chr11 manual_curation polypeptide 8927715 8928239 . + . ID=GSCOCP00018516001;Dbxref=GENE3D:G3DSA:1.10.455.10,InterPro:IPR000235,InterPro:IPR005716,PANTHER:PTHR11205,PANTHER:PTHR11205:SF1,PFAM:PF00177,SUPERFAMILY:SSF47973,SwissProt:O65731,SwissProt:Q9ZUT9,TAIR:AT2G37270.1,TAIR:AT3G11940.1,TrEMBL:A9RHY5,TrEMBL:B3TLU9,TrEMBL:B9T025,TrEMBL:Q93VC6;Derives_from=GSCOCT00018516001;Name=Cc11_g02550;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,GO:0015935,CC_EC_number:missing_EC_number,PRODUCT:Putative Ribosomal protein S7,CC_functional_completeness:complete,CC_gene:RPS5,CC_gene:RPS5A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018516001~ Putative Ribosomal protein S7~ RPS5~ complete;original_location=779868..780392;owner=coffea | |
| 56592 chr11 manual_curation exon 8927467 8929515 . + . Parent=GSCOCT00018516001 | |
| 56593 chr11 manual_curation CDS 8927715 8928239 . + 0 Parent=GSCOCT00018516001 | |
| 56594 chr11 manual_curation gene 9003121 9003853 . + . ID=GSCOCG00018520001;Name=Cc11_g02560 | |
| 56595 chr11 manual_curation mRNA 9003121 9003853 . + . ID=GSCOCT00018520001;Parent=GSCOCG00018520001;Name=Cc11_g02560 | |
| 56596 chr11 manual_curation polypeptide 9003121 9003696 . + . ID=GSCOCP00018520001;Dbxref=InterPro:IPR000554,PANTHER:PTHR11278,PFAM:PF01251,PROSITE:PS00948,SwissProt:Q949H0,SwissProt:Q9XET4,SwissProt:Q9ZNS1,TAIR:AT1G48830.1,TAIR:AT3G02560.1,TAIR:AT5G16130.1,TrEMBL:C6T530,TrEMBL:I1K5L7,TrEMBL:I1L4B6;Derives_from=GSCOCT00018520001;Name=Cc11_g02560;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:40S ribosomal protein S7,CC_functional_completeness:complete,CC_gene:RPS7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018520001~ 40S ribosomal protein S7~ RPS7~ complete;original_location=855274..855849;owner=coffea | |
| 56597 chr11 manual_curation exon 9003121 9003853 . + . Parent=GSCOCT00018520001 | |
| 56598 chr11 manual_curation CDS 9003121 9003696 . + 0 Parent=GSCOCT00018520001 | |
| 56599 chr11 manual_curation gene 9347232 9355888 . - . ID=GSCOCG00004554001;Name=Cc11_g02570 | |
| 56600 chr11 manual_curation mRNA 9347232 9355888 . - . ID=GSCOCT00004554001;Parent=GSCOCG00004554001;Name=Cc11_g02570 | |
| 56601 chr11 manual_curation polypeptide 9347306 9355888 . - . ID=GSCOCP00004554001;Dbxref=InterPro:IPR001563,InterPro:IPR018202,PANTHER:PTHR11802,PFAM:PF00450,PRINTS:PR00724,PROSITE:PS00131,PROSITE:PS00560,SwissProt:Q0WPR4,SwissProt:Q9LEY1,SwissProt:Q9M099,TAIR:AT4G30610.1,TAIR:AT5G08260.1,TAIR:AT5G23210.1,TrEMBL:D7TEY3,TrEMBL:I1LPI4,TrEMBL:Q1EP77;Derives_from=GSCOCT00004554001;Name=Cc11_g02570;Ontology_term=CC_evidence_code:ISS,GO:0004185,GO:0006508,CC_EC_number:3.4.16.6,PRODUCT:Serine carboxypeptidase-like 34,CC_functional_completeness:complete,CC_gene:SCPL34,CC_gene:SCPL35,CC_gene:SCPL24;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004554001~ Serine carboxypeptidase-like 34~ SCPL34~ complete;original_location=complement(join(139192..139486%2C134890..134997%2C134531..134626%2C134355..134447%2C133502..133590%2C132289..132579%2C131717..131853%2C131430..131522%2C131171..131279%2C130904..131053));owner=coffea | |
| 56602 chr11 manual_curation exon 9347232 9347455 . - . Parent=GSCOCT00004554001 | |
| 56603 chr11 manual_curation exon 9347573 9347681 . - . Parent=GSCOCT00004554001 | |
| 56604 chr11 manual_curation exon 9347832 9347924 . - . Parent=GSCOCT00004554001 | |
| 56605 chr11 manual_curation exon 9348119 9348255 . - . Parent=GSCOCT00004554001 | |
| 56606 chr11 manual_curation exon 9348691 9348981 . - . Parent=GSCOCT00004554001 | |
| 56607 chr11 manual_curation exon 9349904 9349992 . - . Parent=GSCOCT00004554001 | |
| 56608 chr11 manual_curation exon 9350757 9350849 . - . Parent=GSCOCT00004554001 | |
| 56609 chr11 manual_curation exon 9350933 9351028 . - . Parent=GSCOCT00004554001 | |
| 56610 chr11 manual_curation exon 9351292 9351399 . - . Parent=GSCOCT00004554001 | |
| 56611 chr11 manual_curation exon 9355594 9355888 . - . Parent=GSCOCT00004554001 | |
| 56612 chr11 manual_curation CDS 9347306 9347455 . - 0 Parent=GSCOCT00004554001 | |
| 56613 chr11 manual_curation CDS 9347573 9347681 . - 2 Parent=GSCOCT00004554001 | |
| 56614 chr11 manual_curation CDS 9347832 9347924 . - 2 Parent=GSCOCT00004554001 | |
| 56615 chr11 manual_curation CDS 9348119 9348255 . - 0 Parent=GSCOCT00004554001 | |
| 56616 chr11 manual_curation CDS 9348691 9348981 . - 0 Parent=GSCOCT00004554001 | |
| 56617 chr11 manual_curation CDS 9349904 9349992 . - 1 Parent=GSCOCT00004554001 | |
| 56618 chr11 manual_curation CDS 9350757 9350849 . - 1 Parent=GSCOCT00004554001 | |
| 56619 chr11 manual_curation CDS 9350933 9351028 . - 1 Parent=GSCOCT00004554001 | |
| 56620 chr11 manual_curation CDS 9351292 9351399 . - 1 Parent=GSCOCT00004554001 | |
| 56621 chr11 manual_curation CDS 9355594 9355888 . - 0 Parent=GSCOCT00004554001 | |
| 56622 chr11 manual_curation gene 9671571 9679534 . - . ID=GSCOCG00025570001;Name=Cc11_g02580 | |
| 56623 chr11 manual_curation mRNA 9671571 9679534 . - . ID=GSCOCT00025570001;Parent=GSCOCG00025570001;Name=Cc11_g02580 | |
| 56624 chr11 manual_curation polypeptide 9671801 9679175 . - . ID=GSCOCP00025570001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR011009,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PROFILE:PS50011,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:O48788,SwissProt:Q84MA9,SwissProt:Q93Y06,TAIR:AT1G10850.1,TAIR:AT1G60630.1,TAIR:AT5G43020.1,TrEMBL:A5B9S0,TrEMBL:B9HVL8,TrEMBL:F6HG08;Derives_from=GSCOCT00025570001;Name=Cc11_g02580;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Inactive leucine-rich repeat receptor-like serine/threonine-protein kinase At1g60630,CC_functional_completeness:complete,CC_gene:At1g60630,CC_gene:At5g67200,CC_gene:At2g26730;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025570001~ Inactive leucine-rich repeat receptor-like serine/threonine-protein kinase At1g60630~ At1g60630~ complete;original_location=join(2799607..2800975%2C2806323..2806981);owner=coffea | |
| 56625 chr11 manual_curation exon 9677807 9679534 . - . Parent=GSCOCT00025570001 | |
| 56626 chr11 manual_curation exon 9671571 9672459 . - . Parent=GSCOCT00025570001 | |
| 56627 chr11 manual_curation CDS 9677807 9679175 . - 0 Parent=GSCOCT00025570001 | |
| 56628 chr11 manual_curation CDS 9671801 9672459 . - 1 Parent=GSCOCT00025570001 | |
| 56629 chr11 manual_curation gene 9709024 9718311 . + . ID=GSCOCG00025569001;Name=Cc11_g02590 | |
| 56630 chr11 manual_curation mRNA 9709024 9718311 . + . ID=GSCOCT00025569001;Parent=GSCOCG00025569001;Name=Cc11_g02590 | |
| 56631 chr11 manual_curation polypeptide 9710999 9717932 . + . ID=GSCOCP00025569001;Dbxref=InterPro:IPR007241,PANTHER:PTHR13038,PFAM:PF04109,SwissProt:P0CM40,SwissProt:Q4P683,SwissProt:Q54NA3,TAIR:AT2G31260.1,TrEMBL:B9GS27,TrEMBL:B9H8K7,TrEMBL:B9T2A0;Derives_from=GSCOCT00025569001;Name=Cc11_g02590;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:autophagy 9 (APG9),CC_functional_completeness:complete,CC_gene:atg9,CC_gene:ATG9;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025569001~ autophagy 9 (APG9)~ atg9~ complete;original_location=complement(join(2767206..2767783%2C2766734..2767054%2C2765832..2766054%2C2762899..2763078%2C2762617..2762823%2C2762258..2762335%2C2762073..2762149%2C2761840..2761950%2C2760850..2761669));owner=coffea | |
| 56632 chr11 manual_curation exon 9709024 9709277 . + . Parent=GSCOCT00025569001 | |
| 56633 chr11 manual_curation exon 9717113 9718311 . + . Parent=GSCOCT00025569001 | |
| 56634 chr11 manual_curation exon 9716832 9716942 . + . Parent=GSCOCT00025569001 | |
| 56635 chr11 manual_curation exon 9716633 9716709 . + . Parent=GSCOCT00025569001 | |
| 56636 chr11 manual_curation exon 9716447 9716524 . + . Parent=GSCOCT00025569001 | |
| 56637 chr11 manual_curation exon 9715959 9716165 . + . Parent=GSCOCT00025569001 | |
| 56638 chr11 manual_curation exon 9715704 9715883 . + . Parent=GSCOCT00025569001 | |
| 56639 chr11 manual_curation exon 9712728 9712950 . + . Parent=GSCOCT00025569001 | |
| 56640 chr11 manual_curation exon 9711728 9712048 . + . Parent=GSCOCT00025569001 | |
| 56641 chr11 manual_curation exon 9710924 9711576 . + . Parent=GSCOCT00025569001 | |
| 56642 chr11 manual_curation CDS 9717113 9717932 . + 2 Parent=GSCOCT00025569001 | |
| 56643 chr11 manual_curation CDS 9716832 9716942 . + 2 Parent=GSCOCT00025569001 | |
| 56644 chr11 manual_curation CDS 9716633 9716709 . + 0 Parent=GSCOCT00025569001 | |
| 56645 chr11 manual_curation CDS 9716447 9716524 . + 0 Parent=GSCOCT00025569001 | |
| 56646 chr11 manual_curation CDS 9715959 9716165 . + 0 Parent=GSCOCT00025569001 | |
| 56647 chr11 manual_curation CDS 9715704 9715883 . + 0 Parent=GSCOCT00025569001 | |
| 56648 chr11 manual_curation CDS 9712728 9712950 . + 2 Parent=GSCOCT00025569001 | |
| 56649 chr11 manual_curation CDS 9711728 9712048 . + 2 Parent=GSCOCT00025569001 | |
| 56650 chr11 manual_curation CDS 9710999 9711576 . + 0 Parent=GSCOCT00025569001 | |
| 56651 chr11 manual_curation gene 9730135 9738766 . - . ID=GSCOCG00025562001;Name=Cc11_g02600 | |
| 56652 chr11 manual_curation mRNA 9730135 9738766 . - . ID=GSCOCT00025562001;Parent=GSCOCG00025562001;Name=Cc11_g02600 | |
| 56653 chr11 manual_curation polypeptide 9730300 9738766 . - . ID=GSCOCP00025562001;Dbxref=InterPro:IPR001878,InterPro:IPR012923,PFAM:PF00098,PFAM:PF07962,PRODOM:PD089639,PROFILE:PS50158,SMART:SM00343,SwissProt:Q3ZCC4,SwissProt:Q5F416,SwissProt:Q9BVW5,TAIR:AT3G02820.1,TrEMBL:G7JPI7,TrEMBL:I1LIR6,TrEMBL:I1LPI5;Derives_from=GSCOCT00025562001;Name=Cc11_g02600;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0005634,GO:0006974,GO:0007049,GO:0008270,GO:0048478,CC_EC_number:missing_EC_number,PRODUCT:Putative zinc knuckle (CCHC-type) family protein,CC_functional_completeness:modules,CC_gene:TIPIN;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025562001~ Putative zinc knuckle (CCHC-type) family protein~ TIPIN~ modules;original_location=join(2740016..2740381%2C2740888..2741010%2C2745270..2745384%2C2745651..2745796%2C2748105..2748482);owner=coffea | |
| 56654 chr11 manual_curation exon 9738401 9738766 . - . Parent=GSCOCT00025562001 | |
| 56655 chr11 manual_curation exon 9737772 9737894 . - . Parent=GSCOCT00025562001 | |
| 56656 chr11 manual_curation exon 9733398 9733512 . - . Parent=GSCOCT00025562001 | |
| 56657 chr11 manual_curation exon 9732986 9733131 . - . Parent=GSCOCT00025562001 | |
| 56658 chr11 manual_curation exon 9730135 9730677 . - . Parent=GSCOCT00025562001 | |
| 56659 chr11 manual_curation CDS 9738401 9738766 . - 0 Parent=GSCOCT00025562001 | |
| 56660 chr11 manual_curation CDS 9737772 9737894 . - 0 Parent=GSCOCT00025562001 | |
| 56661 chr11 manual_curation CDS 9733398 9733512 . - 0 Parent=GSCOCT00025562001 | |
| 56662 chr11 manual_curation CDS 9732986 9733131 . - 1 Parent=GSCOCT00025562001 | |
| 56663 chr11 manual_curation CDS 9730300 9730677 . - 0 Parent=GSCOCT00025562001 | |
| 56664 chr11 manual_curation gene 9747362 9748539 . + . ID=GSCOCG00025560001;Name=Cc11_g02610 | |
| 56665 chr11 manual_curation mRNA 9747362 9748539 . + . ID=GSCOCT00025560001;Parent=GSCOCG00025560001;Name=Cc11_g02610 | |
| 56666 chr11 manual_curation polypeptide 9747362 9748539 . + . ID=GSCOCP00025560001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q7XA40,SwissProt:Q7XA42,SwissProt:Q7XBQ9,TAIR:AT3G14460.1,TAIR:AT3G14470.1,TAIR:AT3G50950.2,TrEMBL:A7L9Y1,TrEMBL:B9F579,TrEMBL:D7SYV8;Derives_from=GSCOCT00025560001;Name=Cc11_g02610;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:RGA2,CC_gene:RGA3,CC_gene:RGA1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025560001~ Putative uncharacterized protein~ RGA2~ fragment;original_location=complement(join(2730953..2731420%2C2730243..2730650));owner=coffea | |
| 56667 chr11 manual_curation exon 9748132 9748539 . + . Parent=GSCOCT00025560001 | |
| 56668 chr11 manual_curation exon 9747362 9747829 . + . Parent=GSCOCT00025560001 | |
| 56669 chr11 manual_curation CDS 9748132 9748539 . + 0 Parent=GSCOCT00025560001 | |
| 56670 chr11 manual_curation CDS 9747362 9747829 . + 0 Parent=GSCOCT00025560001 | |
| 56671 chr11 manual_curation gene 9748701 9750632 . + . ID=GSCOCG00025559001;Name=Cc11_g02620 | |
| 56672 chr11 manual_curation mRNA 9748701 9750632 . + . ID=GSCOCT00025559001;Parent=GSCOCG00025559001;Name=Cc11_g02620 | |
| 56673 chr11 manual_curation polypeptide 9748701 9750632 . + . ID=GSCOCP00025559001;Derives_from=GSCOCT00025559001;Name=Cc11_g02620;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025559001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(2729816..2730081%2C2728150..2728174));owner=coffea | |
| 56674 chr11 manual_curation exon 9750608 9750632 . + . Parent=GSCOCT00025559001 | |
| 56675 chr11 manual_curation exon 9748701 9748966 . + . Parent=GSCOCT00025559001 | |
| 56676 chr11 manual_curation CDS 9750608 9750632 . + 2 Parent=GSCOCT00025559001 | |
| 56677 chr11 manual_curation CDS 9748701 9748966 . + 0 Parent=GSCOCT00025559001 | |
| 56678 chr11 manual_curation gene 9803026 9810227 . + . ID=GSCOCG00025555001;Name=Cc11_g02630 | |
| 56679 chr11 manual_curation mRNA 9803026 9810227 . + . ID=GSCOCT00025555001;Parent=GSCOCG00025555001;Name=Cc11_g02630 | |
| 56680 chr11 manual_curation polypeptide 9803026 9810015 . + . ID=GSCOCP00025555001;Dbxref=InterPro:IPR005031,PFAM:PF03364,TAIR:AT5G08720.1,TrEMBL:B9H4P5,TrEMBL:B9SA97,TrEMBL:F6H4G3;Derives_from=GSCOCT00025555001;Name=Cc11_g02630;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:CONTAINS InterPro DOMAIN/s,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025555001~ CONTAINS InterPro DOMAIN/s: Streptomyces cyclase/dehydrase (InterPro:IPR005031)%3B BEST Arabidopsis thaliana protein match is: Polyketide cyclase / dehydrase and lipid transport protein (TAIR:AT4G01650.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ unknown_gene~ fragment;original_location=complement(join(2675743..2675756%2C2675238..2675297%2C2674584..2674609%2C2674492..2674529%2C2673676..2673754%2C2672521..2672527%2C2671906..2672323%2C2671713..2671813%2C2671118..2671187%2C2670413..2670490%2C2670170..2670317%2C2669422..2669525%2C2669163..2669234%2C2668767..2668871));owner=coffea | |
| 56681 chr11 manual_curation exon 9809911 9810227 . + . Parent=GSCOCT00025555001 | |
| 56682 chr11 manual_curation exon 9809548 9809619 . + . Parent=GSCOCT00025555001 | |
| 56683 chr11 manual_curation exon 9809257 9809360 . + . Parent=GSCOCT00025555001 | |
| 56684 chr11 manual_curation exon 9808465 9808612 . + . Parent=GSCOCT00025555001 | |
| 56685 chr11 manual_curation exon 9808292 9808369 . + . Parent=GSCOCT00025555001 | |
| 56686 chr11 manual_curation exon 9807595 9807664 . + . Parent=GSCOCT00025555001 | |
| 56687 chr11 manual_curation exon 9806969 9807069 . + . Parent=GSCOCT00025555001 | |
| 56688 chr11 manual_curation exon 9806459 9806876 . + . Parent=GSCOCT00025555001 | |
| 56689 chr11 manual_curation exon 9806255 9806261 . + . Parent=GSCOCT00025555001 | |
| 56690 chr11 manual_curation exon 9805028 9805106 . + . Parent=GSCOCT00025555001 | |
| 56691 chr11 manual_curation exon 9804253 9804290 . + . Parent=GSCOCT00025555001 | |
| 56692 chr11 manual_curation exon 9804173 9804198 . + . Parent=GSCOCT00025555001 | |
| 56693 chr11 manual_curation exon 9803485 9803544 . + . Parent=GSCOCT00025555001 | |
| 56694 chr11 manual_curation exon 9803026 9803039 . + . Parent=GSCOCT00025555001 | |
| 56695 chr11 manual_curation CDS 9809911 9810015 . + 0 Parent=GSCOCT00025555001 | |
| 56696 chr11 manual_curation CDS 9809548 9809619 . + 0 Parent=GSCOCT00025555001 | |
| 56697 chr11 manual_curation CDS 9809257 9809360 . + 1 Parent=GSCOCT00025555001 | |
| 56698 chr11 manual_curation CDS 9808465 9808612 . + 0 Parent=GSCOCT00025555001 | |
| 56699 chr11 manual_curation CDS 9808292 9808369 . + 0 Parent=GSCOCT00025555001 | |
| 56700 chr11 manual_curation CDS 9807595 9807664 . + 2 Parent=GSCOCT00025555001 | |
| 56701 chr11 manual_curation CDS 9806969 9807069 . + 0 Parent=GSCOCT00025555001 | |
| 56702 chr11 manual_curation CDS 9806459 9806876 . + 2 Parent=GSCOCT00025555001 | |
| 56703 chr11 manual_curation CDS 9806255 9806261 . + 1 Parent=GSCOCT00025555001 | |
| 56704 chr11 manual_curation CDS 9805028 9805106 . + 0 Parent=GSCOCT00025555001 | |
| 56705 chr11 manual_curation CDS 9804253 9804290 . + 1 Parent=GSCOCT00025555001 | |
| 56706 chr11 manual_curation CDS 9804173 9804198 . + 2 Parent=GSCOCT00025555001 | |
| 56707 chr11 manual_curation CDS 9803485 9803544 . + 2 Parent=GSCOCT00025555001 | |
| 56708 chr11 manual_curation CDS 9803026 9803039 . + 0 Parent=GSCOCT00025555001 | |
| 56709 chr11 manual_curation gene 9948191 9959500 . - . ID=GSCOCG00025554001;Name=Cc11_g02640 | |
| 56710 chr11 manual_curation mRNA 9948191 9959500 . - . ID=GSCOCT00025554001;Parent=GSCOCG00025554001;Name=Cc11_g02640 | |
| 56711 chr11 manual_curation polypeptide 9948391 9959500 . - . ID=GSCOCP00025554001;Dbxref=GENE3D:G3DSA:1.10.10.10,GENE3D:G3DSA:3.40.30.10,InterPro:IPR000591,InterPro:IPR002109,InterPro:IPR006869,InterPro:IPR011991,InterPro:IPR012335,InterPro:IPR012336,PFAM:PF00462,PFAM:PF00610,PFAM:PF04784,PROFILE:PS50186,PROFILE:PS51354,SMART:SM00049,SUPERFAMILY:SSF52833,TAIR:AT3G11920.1,TAIR:AT4G08550.1,TAIR:AT5G66600.4,TrEMBL:A5AJB7,TrEMBL:B9RY43,TrEMBL:D7TAF6;Derives_from=GSCOCT00025554001;Name=Cc11_g02640;Ontology_term=CC_evidence_code:ISS,GO:0009055,GO:0015035,GO:0023034,GO:0045454,CC_EC_number:missing_EC_number,PRODUCT:glutaredoxin-related,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025554001~ glutaredoxin-related~ unknown_gene~ complete;original_location=join(2519282..2520436%2C2527578..2527633%2C2527735..2527965%2C2528862..2529153%2C2529681..2529880%2C2530238..2530391);owner=coffea | |
| 56712 chr11 manual_curation exon 9958346 9959500 . - . Parent=GSCOCT00025554001 | |
| 56713 chr11 manual_curation exon 9951149 9951204 . - . Parent=GSCOCT00025554001 | |
| 56714 chr11 manual_curation exon 9950817 9951047 . - . Parent=GSCOCT00025554001 | |
| 56715 chr11 manual_curation exon 9949629 9949920 . - . Parent=GSCOCT00025554001 | |
| 56716 chr11 manual_curation exon 9948902 9949101 . - . Parent=GSCOCT00025554001 | |
| 56717 chr11 manual_curation exon 9948191 9948544 . - . Parent=GSCOCT00025554001 | |
| 56718 chr11 manual_curation CDS 9958346 9959500 . - 0 Parent=GSCOCT00025554001 | |
| 56719 chr11 manual_curation CDS 9951149 9951204 . - 0 Parent=GSCOCT00025554001 | |
| 56720 chr11 manual_curation CDS 9950817 9951047 . - 2 Parent=GSCOCT00025554001 | |
| 56721 chr11 manual_curation CDS 9949629 9949920 . - 2 Parent=GSCOCT00025554001 | |
| 56722 chr11 manual_curation CDS 9948902 9949101 . - 0 Parent=GSCOCT00025554001 | |
| 56723 chr11 manual_curation CDS 9948391 9948544 . - 2 Parent=GSCOCT00025554001 | |
| 56724 chr11 manual_curation gene 9982470 9987146 . - . ID=GSCOCG00025552001;Name=Cc11_g02650 | |
| 56725 chr11 manual_curation mRNA 9982470 9987146 . - . ID=GSCOCT00025552001;Parent=GSCOCG00025552001;Name=Cc11_g02650 | |
| 56726 chr11 manual_curation polypeptide 9982470 9987146 . - . ID=GSCOCP00025552001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:C0LGP4,SwissProt:C0LGT6,SwissProt:Q9SD62,TAIR:AT3G47110.1,TAIR:AT3G47570.1,TAIR:AT3G47580.1,TrEMBL:B9I1J3,TrEMBL:B9SM56,TrEMBL:F6H520;Derives_from=GSCOCT00025552001;Name=Cc11_g02650;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570,CC_functional_completeness:complete,CC_gene:At3g47570,CC_gene:At3g47110,CC_gene:EFR;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025552001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570~ At3g47570~ complete;original_location=join(2491636..2491642%2C2491858..2491929%2C2493654..2493965%2C2494050..2494340%2C2494413..2495022%2C2495086..2495630%2C2495961..2496086%2C2496164..2496312);owner=coffea | |
| 56727 chr11 manual_curation exon 9987140 9987146 . - . Parent=GSCOCT00025552001 | |
| 56728 chr11 manual_curation exon 9986853 9986924 . - . Parent=GSCOCT00025552001 | |
| 56729 chr11 manual_curation exon 9984817 9985128 . - . Parent=GSCOCT00025552001 | |
| 56730 chr11 manual_curation exon 9984442 9984732 . - . Parent=GSCOCT00025552001 | |
| 56731 chr11 manual_curation exon 9983760 9984369 . - . Parent=GSCOCT00025552001 | |
| 56732 chr11 manual_curation exon 9983152 9983696 . - . Parent=GSCOCT00025552001 | |
| 56733 chr11 manual_curation exon 9982696 9982821 . - . Parent=GSCOCT00025552001 | |
| 56734 chr11 manual_curation exon 9982470 9982618 . - . Parent=GSCOCT00025552001 | |
| 56735 chr11 manual_curation CDS 9987140 9987146 . - 0 Parent=GSCOCT00025552001 | |
| 56736 chr11 manual_curation CDS 9986853 9986924 . - 1 Parent=GSCOCT00025552001 | |
| 56737 chr11 manual_curation CDS 9984817 9985128 . - 1 Parent=GSCOCT00025552001 | |
| 56738 chr11 manual_curation CDS 9984442 9984732 . - 1 Parent=GSCOCT00025552001 | |
| 56739 chr11 manual_curation CDS 9983760 9984369 . - 1 Parent=GSCOCT00025552001 | |
| 56740 chr11 manual_curation CDS 9983152 9983696 . - 2 Parent=GSCOCT00025552001 | |
| 56741 chr11 manual_curation CDS 9982696 9982821 . - 1 Parent=GSCOCT00025552001 | |
| 56742 chr11 manual_curation CDS 9982470 9982618 . - 1 Parent=GSCOCT00025552001 | |
| 56743 chr11 manual_curation gene 10037857 10039621 . - . ID=GSCOCG00025550001;Name=Cc11_g02660 | |
| 56744 chr11 manual_curation mRNA 10037857 10039621 . - . ID=GSCOCT00025550001;Parent=GSCOCG00025550001;Name=Cc11_g02660 | |
| 56745 chr11 manual_curation polypeptide 10037857 10039621 . - . ID=GSCOCP00025550001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:C0LGP4,SwissProt:C0LGT6,SwissProt:Q9SD62,TAIR:AT3G47090.1,TAIR:AT3G47570.1,TAIR:AT3G47580.1,TrEMBL:B9I1J3,TrEMBL:B9SM56,TrEMBL:B9SWC8;Derives_from=GSCOCT00025550001;Name=Cc11_g02660;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570,CC_functional_completeness:fragment,CC_gene:At3g47570,CC_gene:EFR,CC_gene:At3g47110;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025550001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570~ At3g47570~ fragment;original_location=join(2439161..2440229%2C2440579..2440925);owner=coffea | |
| 56746 chr11 manual_curation exon 10038553 10039621 . - . Parent=GSCOCT00025550001 | |
| 56747 chr11 manual_curation exon 10037857 10038203 . - . Parent=GSCOCT00025550001 | |
| 56748 chr11 manual_curation CDS 10038553 10039621 . - 0 Parent=GSCOCT00025550001 | |
| 56749 chr11 manual_curation CDS 10037857 10038203 . - 1 Parent=GSCOCT00025550001 | |
| 56750 chr11 manual_curation gene 10050079 10052364 . - . ID=GSCOCG00025549001;Name=Cc11_g02670 | |
| 56751 chr11 manual_curation mRNA 10050079 10052364 . - . ID=GSCOCT00025549001;Parent=GSCOCG00025549001;Name=Cc11_g02670 | |
| 56752 chr11 manual_curation polypeptide 10050079 10052364 . - . ID=GSCOCP00025549001;Dbxref=InterPro:IPR001611,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SwissProt:C0LGP4,SwissProt:C0LGT6,SwissProt:Q9SD62,TAIR:AT3G47570.1,TAIR:AT3G47580.1,TAIR:AT5G20480.1,TrEMBL:A5B0Q4,TrEMBL:F6H510,TrEMBL:F6HP05;Derives_from=GSCOCT00025549001;Name=Cc11_g02670;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570,CC_functional_completeness:complete,CC_gene:At3g47570,CC_gene:EFR,CC_gene:At3g47110;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025549001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570~ At3g47570~ complete;original_location=join(2426418..2426832%2C2426905..2427339%2C2428621..2428703);owner=coffea | |
| 56753 chr11 manual_curation exon 10051950 10052364 . - . Parent=GSCOCT00025549001 | |
| 56754 chr11 manual_curation exon 10051443 10051877 . - . Parent=GSCOCT00025549001 | |
| 56755 chr11 manual_curation exon 10050079 10050161 . - . Parent=GSCOCT00025549001 | |
| 56756 chr11 manual_curation CDS 10051950 10052364 . - 0 Parent=GSCOCT00025549001 | |
| 56757 chr11 manual_curation CDS 10051443 10051877 . - 1 Parent=GSCOCT00025549001 | |
| 56758 chr11 manual_curation CDS 10050079 10050161 . - 1 Parent=GSCOCT00025549001 | |
| 56759 chr11 manual_curation gene 10084679 10085221 . + . ID=GSCOCG00025548001;Name=Cc11_g02680 | |
| 56760 chr11 manual_curation mRNA 10084679 10085221 . + . ID=GSCOCT00025548001;Parent=GSCOCG00025548001;Name=Cc11_g02680 | |
| 56761 chr11 manual_curation polypeptide 10084679 10085221 . + . ID=GSCOCP00025548001;Dbxref=SwissProt:Q38899,TAIR:AT2G37560.1,TrEMBL:B9SP26,TrEMBL:D7LJU9,TrEMBL:E0CP80;Derives_from=GSCOCT00025548001;Name=Cc11_g02680;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:ORC2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025548001~ Hypothetical protein~ ORC2~ missing_functional_completeness;original_location=complement(join(2393975..2394103%2C2393561..2393878));owner=coffea | |
| 56762 chr11 manual_curation exon 10084904 10085221 . + . Parent=GSCOCT00025548001 | |
| 56763 chr11 manual_curation exon 10084679 10084807 . + . Parent=GSCOCT00025548001 | |
| 56764 chr11 manual_curation CDS 10084904 10085221 . + 0 Parent=GSCOCT00025548001 | |
| 56765 chr11 manual_curation CDS 10084679 10084807 . + 0 Parent=GSCOCT00025548001 | |
| 56766 chr11 manual_curation gene 10086287 10087046 . + . ID=GSCOCG00025547001;Name=Cc11_g02690 | |
| 56767 chr11 manual_curation mRNA 10086287 10087046 . + . ID=GSCOCT00025547001;Parent=GSCOCG00025547001;Name=Cc11_g02690 | |
| 56768 chr11 manual_curation polypeptide 10086287 10087046 . + . ID=GSCOCP00025547001;Dbxref=InterPro:IPR011704,PFAM:PF07728,SwissProt:Q12019,SwissProt:Q869L3,SwissProt:Q9NU22,TAIR:AT1G67120.1,TrEMBL:B8BH91,TrEMBL:B9MXW7,TrEMBL:B9S5U3;Derives_from=GSCOCT00025547001;Name=Cc11_g02690;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0016887,CC_EC_number:missing_EC_number,PRODUCT:Putative Midasin,CC_functional_completeness:fragment,CC_gene:mdn1,CC_gene:MDN1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025547001~ Putative Midasin~ mdn1~ fragment;original_location=complement(join(2392396..2392495%2C2392206..2392324%2C2391736..2391834));owner=coffea | |
| 56769 chr11 manual_curation exon 10086948 10087046 . + . Parent=GSCOCT00025547001 | |
| 56770 chr11 manual_curation exon 10086458 10086576 . + . Parent=GSCOCT00025547001 | |
| 56771 chr11 manual_curation exon 10086287 10086386 . + . Parent=GSCOCT00025547001 | |
| 56772 chr11 manual_curation CDS 10086948 10087046 . + 0 Parent=GSCOCT00025547001 | |
| 56773 chr11 manual_curation CDS 10086458 10086576 . + 1 Parent=GSCOCT00025547001 | |
| 56774 chr11 manual_curation CDS 10086287 10086386 . + 0 Parent=GSCOCT00025547001 | |
| 56775 chr11 manual_curation gene 10097714 10098649 . - . ID=GSCOCG00025546001;Name=Cc11_g02700 | |
| 56776 chr11 manual_curation mRNA 10097714 10098649 . - . ID=GSCOCT00025546001;Parent=GSCOCG00025546001;Name=Cc11_g02700 | |
| 56777 chr11 manual_curation polypeptide 10097714 10098649 . - . ID=GSCOCP00025546001;Dbxref=InterPro:IPR001611,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SwissProt:C0LGP4,SwissProt:C0LGQ5,SwissProt:Q9SD62,TAIR:AT3G47570.1,TAIR:AT3G47580.1,TAIR:AT4G20140.1,TrEMBL:A5BQC8,TrEMBL:B9T2Z9,TrEMBL:F6HP05;Derives_from=GSCOCT00025546001;Name=Cc11_g02700;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative LRR receptor-like serine/threonine-protein kinase GSO1,CC_functional_completeness:complete,CC_gene:GSO1,CC_gene:At3g47570,CC_gene:At3g47110;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025546001~ Putative LRR receptor-like serine/threonine-protein kinase GSO1~ GSO1~ complete;original_location=2380133..2381068;owner=coffea | |
| 56778 chr11 manual_curation exon 10097714 10098649 . - . Parent=GSCOCT00025546001 | |
| 56779 chr11 manual_curation CDS 10097714 10098649 . - 0 Parent=GSCOCT00025546001 | |
| 56780 chr11 manual_curation gene 10242199 10242369 . + . ID=GSCOCG00025544001;Name=Cc11_g02710 | |
| 56781 chr11 manual_curation mRNA 10242199 10242369 . + . ID=GSCOCT00025544001;Parent=GSCOCG00025544001;Name=Cc11_g02710 | |
| 56782 chr11 manual_curation polypeptide 10242199 10242369 . + . ID=GSCOCP00025544001;Dbxref=InterPro:IPR000626,InterPro:IPR019955,PFAM:PF00240,PROFILE:PS50053,TAIR:AT1G23410.1,TAIR:AT2G47110.1,TAIR:AT3G62250.1;Derives_from=GSCOCT00025544001;Name=Cc11_g02710;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025544001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(2236413..2236583);owner=coffea | |
| 56783 chr11 manual_curation exon 10242199 10242369 . + . Parent=GSCOCT00025544001 | |
| 56784 chr11 manual_curation CDS 10242199 10242369 . + 0 Parent=GSCOCT00025544001 | |
| 56785 chr11 manual_curation gene 10242510 10242632 . + . ID=GSCOCG00025543001;Name=Cc11_g02720 | |
| 56786 chr11 manual_curation mRNA 10242510 10242632 . + . ID=GSCOCT00025543001;Parent=GSCOCG00025543001;Name=Cc11_g02720 | |
| 56787 chr11 manual_curation polypeptide 10242510 10242632 . + . ID=GSCOCP00025543001;Dbxref=InterPro:IPR002906,PFAM:PF01599;Derives_from=GSCOCT00025543001;Name=Cc11_g02720;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025543001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(2236150..2236272);owner=coffea | |
| 56788 chr11 manual_curation exon 10242510 10242632 . + . Parent=GSCOCT00025543001 | |
| 56789 chr11 manual_curation CDS 10242510 10242632 . + 0 Parent=GSCOCT00025543001 | |
| 56790 chr11 manual_curation gene 10482061 10484206 . - . ID=GSCOCG00025541001;Name=Cc11_g02730 | |
| 56791 chr11 manual_curation mRNA 10482061 10484206 . - . ID=GSCOCT00025541001;Parent=GSCOCG00025541001;Name=Cc11_g02730 | |
| 56792 chr11 manual_curation polypeptide 10482061 10484206 . - . ID=GSCOCP00025541001;Dbxref=InterPro:IPR000823,InterPro:IPR002016,InterPro:IPR010255,InterPro:IPR019793,InterPro:IPR019794,PFAM:PF00141,PRINTS:PR00458,PRINTS:PR00461,PROFILE:PS50873,PROSITE:PS00435,PROSITE:PS00436,SUPERFAMILY:SSF48113,SwissProt:Q02200,SwissProt:Q9LE15,SwissProt:Q9M9Q9,TAIR:AT1G14540.1,TAIR:AT1G14550.1,TAIR:AT5G05340.1,TrEMBL:B9HL06,TrEMBL:B9S798,TrEMBL:I1NH68;Derives_from=GSCOCT00025541001;Name=Cc11_g02730;Ontology_term=CC_evidence_code:ISS,GO:0004601,GO:0006979,GO:0020037,GO:0055114,CC_EC_number:1.11.1.7,PRODUCT:Lignin-forming anionic peroxidase,CC_functional_completeness:complete,CC_gene:PER4,CC_gene:PER5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025541001~ Lignin-forming anionic peroxidase~ PER4~ complete;original_location=join(1994576..1994794%2C1994940..1995131%2C1995792..1995957%2C1996333..1996721);owner=coffea | |
| 56793 chr11 manual_curation exon 10483988 10484206 . - . Parent=GSCOCT00025541001 | |
| 56794 chr11 manual_curation exon 10483651 10483842 . - . Parent=GSCOCT00025541001 | |
| 56795 chr11 manual_curation exon 10482825 10482990 . - . Parent=GSCOCT00025541001 | |
| 56796 chr11 manual_curation exon 10482061 10482449 . - . Parent=GSCOCT00025541001 | |
| 56797 chr11 manual_curation CDS 10483988 10484206 . - 0 Parent=GSCOCT00025541001 | |
| 56798 chr11 manual_curation CDS 10483651 10483842 . - 0 Parent=GSCOCT00025541001 | |
| 56799 chr11 manual_curation CDS 10482825 10482990 . - 0 Parent=GSCOCT00025541001 | |
| 56800 chr11 manual_curation CDS 10482061 10482449 . - 1 Parent=GSCOCT00025541001 | |
| 56801 chr11 manual_curation gene 10596192 10596767 . + . ID=GSCOCG00025536001;Name=Cc11_g02740 | |
| 56802 chr11 manual_curation mRNA 10596192 10596767 . + . ID=GSCOCT00025536001;Parent=GSCOCG00025536001;Name=Cc11_g02740 | |
| 56803 chr11 manual_curation polypeptide 10596192 10596767 . + . ID=GSCOCP00025536001;Derives_from=GSCOCT00025536001;Name=Cc11_g02740;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025536001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1882392..1882590%2C1882015..1882109));owner=coffea | |
| 56804 chr11 manual_curation exon 10596673 10596767 . + . Parent=GSCOCT00025536001 | |
| 56805 chr11 manual_curation exon 10596192 10596390 . + . Parent=GSCOCT00025536001 | |
| 56806 chr11 manual_curation CDS 10596673 10596767 . + 1 Parent=GSCOCT00025536001 | |
| 56807 chr11 manual_curation CDS 10596192 10596390 . + 0 Parent=GSCOCT00025536001 | |
| 56808 chr11 manual_curation gene 10598233 10599738 . - . ID=GSCOCG00025535001;Name=Cc11_g02750 | |
| 56809 chr11 manual_curation mRNA 10598233 10599738 . - . ID=GSCOCT00025535001;Parent=GSCOCG00025535001;Name=Cc11_g02750 | |
| 56810 chr11 manual_curation polypeptide 10599439 10599738 . - . ID=GSCOCP00025535001;Derives_from=GSCOCT00025535001;Name=Cc11_g02750;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025535001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1879044..1879343;owner=coffea | |
| 56811 chr11 manual_curation exon 10598233 10599738 . - . Parent=GSCOCT00025535001 | |
| 56812 chr11 manual_curation CDS 10599439 10599738 . - 0 Parent=GSCOCT00025535001 | |
| 56813 chr11 manual_curation gene 10601202 10608235 . + . ID=GSCOCG00025534001;Name=Cc11_g02760 | |
| 56814 chr11 manual_curation mRNA 10601202 10608235 . + . ID=GSCOCT00025534001;Parent=GSCOCG00025534001;Name=Cc11_g02760 | |
| 56815 chr11 manual_curation polypeptide 10601202 10607547 . + . ID=GSCOCP00025534001;Dbxref=InterPro:IPR006895,InterPro:IPR006896,InterPro:IPR006900,InterPro:IPR012990,PFAM:PF04810,PFAM:PF04811,PFAM:PF04815,PFAM:PF08033,SUPERFAMILY:SSF81811,SUPERFAMILY:SSF82919,SwissProt:A6QNT8,SwissProt:Q3U2P1,SwissProt:Q9SFU0,TAIR:AT3G07100.1,TAIR:AT3G44340.1,TAIR:AT4G32640.1,TrEMBL:B9HTP0,TrEMBL:B9T474,TrEMBL:F6H1Z6;Derives_from=GSCOCT00025534001;Name=Cc11_g02760;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0006886,GO:0006888,GO:0008270,GO:0030127,CC_EC_number:missing_EC_number,PRODUCT:Protein transport protein Sec24-like At3g07100,CC_functional_completeness:complete,CC_gene:At3g07100,CC_gene:SEC24A,CC_gene:Sec24a;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025534001~ Protein transport protein Sec24-like At3g07100~ At3g07100~ complete;original_location=complement(join(1876459..1877580%2C1876223..1876361%2C1875423..1875613%2C1875119..1875205%2C1874795..1874998%2C1874350..1874581%2C1873720..1873869%2C1873437..1873593%2C1872849..1872976%2C1872445..1872767%2C1872170..1872355%2C1871235..1871468));owner=coffea | |
| 56816 chr11 manual_curation exon 10607969 10608235 . + . Parent=GSCOCT00025534001 | |
| 56817 chr11 manual_curation exon 10607314 10607554 . + . Parent=GSCOCT00025534001 | |
| 56818 chr11 manual_curation exon 10606427 10606612 . + . Parent=GSCOCT00025534001 | |
| 56819 chr11 manual_curation exon 10606015 10606337 . + . Parent=GSCOCT00025534001 | |
| 56820 chr11 manual_curation exon 10605806 10605933 . + . Parent=GSCOCT00025534001 | |
| 56821 chr11 manual_curation exon 10605189 10605345 . + . Parent=GSCOCT00025534001 | |
| 56822 chr11 manual_curation exon 10604913 10605062 . + . Parent=GSCOCT00025534001 | |
| 56823 chr11 manual_curation exon 10604201 10604432 . + . Parent=GSCOCT00025534001 | |
| 56824 chr11 manual_curation exon 10603784 10603987 . + . Parent=GSCOCT00025534001 | |
| 56825 chr11 manual_curation exon 10603577 10603663 . + . Parent=GSCOCT00025534001 | |
| 56826 chr11 manual_curation exon 10603169 10603359 . + . Parent=GSCOCT00025534001 | |
| 56827 chr11 manual_curation exon 10602421 10602559 . + . Parent=GSCOCT00025534001 | |
| 56828 chr11 manual_curation exon 10601202 10602323 . + . Parent=GSCOCT00025534001 | |
| 56829 chr11 manual_curation CDS 10607314 10607547 . + 0 Parent=GSCOCT00025534001 | |
| 56830 chr11 manual_curation CDS 10606427 10606612 . + 0 Parent=GSCOCT00025534001 | |
| 56831 chr11 manual_curation CDS 10606015 10606337 . + 1 Parent=GSCOCT00025534001 | |
| 56832 chr11 manual_curation CDS 10605806 10605933 . + 2 Parent=GSCOCT00025534001 | |
| 56833 chr11 manual_curation CDS 10605189 10605345 . + 1 Parent=GSCOCT00025534001 | |
| 56834 chr11 manual_curation CDS 10604913 10605062 . + 1 Parent=GSCOCT00025534001 | |
| 56835 chr11 manual_curation CDS 10604201 10604432 . + 0 Parent=GSCOCT00025534001 | |
| 56836 chr11 manual_curation CDS 10603784 10603987 . + 0 Parent=GSCOCT00025534001 | |
| 56837 chr11 manual_curation CDS 10603577 10603663 . + 0 Parent=GSCOCT00025534001 | |
| 56838 chr11 manual_curation CDS 10603169 10603359 . + 1 Parent=GSCOCT00025534001 | |
| 56839 chr11 manual_curation CDS 10602421 10602559 . + 0 Parent=GSCOCT00025534001 | |
| 56840 chr11 manual_curation CDS 10601202 10602323 . + 0 Parent=GSCOCT00025534001 | |
| 56841 chr11 manual_curation gene 10616809 10619380 . - . ID=GSCOCG00025531001;Name=Cc11_g02770 | |
| 56842 chr11 manual_curation mRNA 10616809 10619380 . - . ID=GSCOCT00025531001;Parent=GSCOCG00025531001;Name=Cc11_g02770 | |
| 56843 chr11 manual_curation polypeptide 10616809 10619371 . - . ID=GSCOCP00025531001;Derives_from=GSCOCT00025531001;Name=Cc11_g02770;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025531001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(1859411..1859431%2C1861809..1861973);owner=coffea | |
| 56844 chr11 manual_curation exon 10619351 10619380 . - . Parent=GSCOCT00025531001 | |
| 56845 chr11 manual_curation exon 10616809 10616973 . - . Parent=GSCOCT00025531001 | |
| 56846 chr11 manual_curation CDS 10619351 10619371 . - 0 Parent=GSCOCT00025531001 | |
| 56847 chr11 manual_curation CDS 10616809 10616973 . - 0 Parent=GSCOCT00025531001 | |
| 56848 chr11 manual_curation gene 10677715 10682897 . - . ID=GSCOCG00025530001;Name=Cc11_g02780 | |
| 56849 chr11 manual_curation mRNA 10677715 10682897 . - . ID=GSCOCT00025530001;Parent=GSCOCG00025530001;Name=Cc11_g02780 | |
| 56850 chr11 manual_curation polypeptide 10677935 10682194 . - . ID=GSCOCP00025530001;Dbxref=InterPro:IPR007005,PANTHER:PTHR12722,PFAM:PF04921,SwissProt:B8BDW1,SwissProt:Q69JZ7,SwissProt:Q8H110,TAIR:AT2G21150.1,TrEMBL:B9STC7,TrEMBL:D8REB9,TrEMBL:G7LAJ6;Derives_from=GSCOCT00025530001;Name=Cc11_g02780;Ontology_term=CC_evidence_code:ISS,GO:0005634,CC_EC_number:missing_EC_number,PRODUCT:Protein XAP5 CIRCADIAN TIMEKEEPER,CC_functional_completeness:complete,CC_gene:XCT;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025530001~ Protein XAP5 CIRCADIAN TIMEKEEPER~ XCT~ complete;original_location=join(1796588..1796758%2C1796867..1796932%2C1797018..1797082%2C1797201..1797313%2C1798637..1798718%2C1798811..1798887%2C1798969..1799030%2C1799174..1799305%2C1799400..1799453%2C1800033..1800098%2C1800492..1800566%2C1800797..1800847);owner=coffea | |
| 56851 chr11 manual_curation exon 10682858 10682897 . - . Parent=GSCOCT00025530001 | |
| 56852 chr11 manual_curation exon 10682652 10682710 . - . Parent=GSCOCT00025530001 | |
| 56853 chr11 manual_curation exon 10682024 10682263 . - . Parent=GSCOCT00025530001 | |
| 56854 chr11 manual_curation exon 10681850 10681915 . - . Parent=GSCOCT00025530001 | |
| 56855 chr11 manual_curation exon 10681700 10681764 . - . Parent=GSCOCT00025530001 | |
| 56856 chr11 manual_curation exon 10681469 10681581 . - . Parent=GSCOCT00025530001 | |
| 56857 chr11 manual_curation exon 10680064 10680145 . - . Parent=GSCOCT00025530001 | |
| 56858 chr11 manual_curation exon 10679895 10679971 . - . Parent=GSCOCT00025530001 | |
| 56859 chr11 manual_curation exon 10679752 10679813 . - . Parent=GSCOCT00025530001 | |
| 56860 chr11 manual_curation exon 10679477 10679608 . - . Parent=GSCOCT00025530001 | |
| 56861 chr11 manual_curation exon 10679329 10679382 . - . Parent=GSCOCT00025530001 | |
| 56862 chr11 manual_curation exon 10678684 10678749 . - . Parent=GSCOCT00025530001 | |
| 56863 chr11 manual_curation exon 10678216 10678290 . - . Parent=GSCOCT00025530001 | |
| 56864 chr11 manual_curation exon 10677715 10677985 . - . Parent=GSCOCT00025530001 | |
| 56865 chr11 manual_curation CDS 10682024 10682194 . - 0 Parent=GSCOCT00025530001 | |
| 56866 chr11 manual_curation CDS 10681850 10681915 . - 0 Parent=GSCOCT00025530001 | |
| 56867 chr11 manual_curation CDS 10681700 10681764 . - 0 Parent=GSCOCT00025530001 | |
| 56868 chr11 manual_curation CDS 10681469 10681581 . - 2 Parent=GSCOCT00025530001 | |
| 56869 chr11 manual_curation CDS 10680064 10680145 . - 1 Parent=GSCOCT00025530001 | |
| 56870 chr11 manual_curation CDS 10679895 10679971 . - 2 Parent=GSCOCT00025530001 | |
| 56871 chr11 manual_curation CDS 10679752 10679813 . - 1 Parent=GSCOCT00025530001 | |
| 56872 chr11 manual_curation CDS 10679477 10679608 . - 0 Parent=GSCOCT00025530001 | |
| 56873 chr11 manual_curation CDS 10679329 10679382 . - 0 Parent=GSCOCT00025530001 | |
| 56874 chr11 manual_curation CDS 10678684 10678749 . - 0 Parent=GSCOCT00025530001 | |
| 56875 chr11 manual_curation CDS 10678216 10678290 . - 0 Parent=GSCOCT00025530001 | |
| 56876 chr11 manual_curation CDS 10677935 10677985 . - 0 Parent=GSCOCT00025530001 | |
| 56877 chr11 manual_curation gene 10720730 10722603 . + . ID=GSCOCG00025528001;Name=Cc11_g02790 | |
| 56878 chr11 manual_curation mRNA 10720730 10722603 . + . ID=GSCOCT00025528001;Parent=GSCOCG00025528001;Name=Cc11_g02790 | |
| 56879 chr11 manual_curation polypeptide 10720730 10722603 . + . ID=GSCOCP00025528001;Dbxref=InterPro:IPR001107,PFAM:PF01145,SwissProt:D2XNQ8,SwissProt:D2XNR0,SwissProt:D2XNR2,TAIR:AT5G25250.1,TAIR:AT5G25260.1,TAIR:AT5G64870.1,TrEMBL:B9HAI2,TrEMBL:B9IL19,TrEMBL:B9S1P0;Derives_from=GSCOCT00025528001;Name=Cc11_g02790;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Flotillin-like protein 1,CC_functional_completeness:complete,CC_gene:FLOT1,CC_gene:FLOT3,CC_gene:FLOT6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025528001~ Flotillin-like protein 1~ FLOT1~ complete;original_location=complement(join(1757126..1758052%2C1756179..1756715));owner=coffea | |
| 56880 chr11 manual_curation exon 10722067 10722603 . + . Parent=GSCOCT00025528001 | |
| 56881 chr11 manual_curation exon 10720730 10721656 . + . Parent=GSCOCT00025528001 | |
| 56882 chr11 manual_curation CDS 10722067 10722603 . + 0 Parent=GSCOCT00025528001 | |
| 56883 chr11 manual_curation CDS 10720730 10721656 . + 0 Parent=GSCOCT00025528001 | |
| 56884 chr11 manual_curation gene 10726202 10731098 . - . ID=GSCOCG00025527001;Name=Cc11_g02800 | |
| 56885 chr11 manual_curation mRNA 10726202 10731098 . - . ID=GSCOCT00025527001;Parent=GSCOCG00025527001;Name=Cc11_g02800 | |
| 56886 chr11 manual_curation polypeptide 10726202 10731098 . - . ID=GSCOCP00025527001;Dbxref=InterPro:IPR000960,InterPro:IPR020946,PFAM:PF00743,PRINTS:PR00370,SwissProt:Q9C8U0,SwissProt:Q9SS04,SwissProt:Q9SXE1,TAIR:AT1G62560.1,TAIR:AT1G63370.1,TAIR:AT1G65860.1,TrEMBL:F6GX71,TrEMBL:G7LEJ7,TrEMBL:I1M0V5;Derives_from=GSCOCT00025527001;Name=Cc11_g02800;Ontology_term=CC_evidence_code:ISS,GO:0004499,GO:0050660,GO:0050661,GO:0055114,CC_EC_number:1.14.13.8,PRODUCT:Putative Flavin-containing monooxygenase FMO GS-OX3,CC_functional_completeness:complete,CC_gene:FMOGS-OX3,CC_gene:FMOGS-OX1,CC_gene:At1g63370;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025527001~ Putative Flavin-containing monooxygenase FMO GS-OX3~ FMOGS-OX3~ complete;original_location=join(1747684..1747792%2C1748231..1748712%2C1749603..1749752%2C1751024..1751109%2C1751940..1752075%2C1752386..1752580);owner=coffea | |
| 56887 chr11 manual_curation exon 10730990 10731098 . - . Parent=GSCOCT00025527001 | |
| 56888 chr11 manual_curation exon 10730070 10730551 . - . Parent=GSCOCT00025527001 | |
| 56889 chr11 manual_curation exon 10729030 10729179 . - . Parent=GSCOCT00025527001 | |
| 56890 chr11 manual_curation exon 10727673 10727758 . - . Parent=GSCOCT00025527001 | |
| 56891 chr11 manual_curation exon 10726707 10726842 . - . Parent=GSCOCT00025527001 | |
| 56892 chr11 manual_curation exon 10726202 10726396 . - . Parent=GSCOCT00025527001 | |
| 56893 chr11 manual_curation CDS 10730990 10731098 . - 0 Parent=GSCOCT00025527001 | |
| 56894 chr11 manual_curation CDS 10730070 10730551 . - 1 Parent=GSCOCT00025527001 | |
| 56895 chr11 manual_curation CDS 10729030 10729179 . - 0 Parent=GSCOCT00025527001 | |
| 56896 chr11 manual_curation CDS 10727673 10727758 . - 0 Parent=GSCOCT00025527001 | |
| 56897 chr11 manual_curation CDS 10726707 10726842 . - 2 Parent=GSCOCT00025527001 | |
| 56898 chr11 manual_curation CDS 10726202 10726396 . - 0 Parent=GSCOCT00025527001 | |
| 56899 chr11 manual_curation gene 10743343 10745777 . + . ID=GSCOCG00025526001;Name=Cc11_g02810 | |
| 56900 chr11 manual_curation mRNA 10743343 10745777 . + . ID=GSCOCT00025526001;Parent=GSCOCG00025526001;Name=Cc11_g02810 | |
| 56901 chr11 manual_curation polypeptide 10743343 10745777 . + . ID=GSCOCP00025526001;Dbxref=InterPro:IPR001107,PFAM:PF01145,SwissProt:D2XNQ8,SwissProt:D2XNQ9,SwissProt:D2XNR0,TAIR:AT5G25250.1,TAIR:AT5G25260.1,TAIR:AT5G64870.1,TrEMBL:B9HAI2,TrEMBL:B9IL19,TrEMBL:B9S1P0;Derives_from=GSCOCT00025526001;Name=Cc11_g02810;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Flotillin-like protein 1,CC_functional_completeness:complete,CC_gene:FLOT1,CC_gene:FLOT2,CC_gene:FLOT3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025526001~ Flotillin-like protein 1~ FLOT1~ complete;original_location=complement(join(1734513..1735439%2C1733005..1733529));owner=coffea | |
| 56902 chr11 manual_curation exon 10745253 10745777 . + . Parent=GSCOCT00025526001 | |
| 56903 chr11 manual_curation exon 10743343 10744269 . + . Parent=GSCOCT00025526001 | |
| 56904 chr11 manual_curation CDS 10745253 10745777 . + 0 Parent=GSCOCT00025526001 | |
| 56905 chr11 manual_curation CDS 10743343 10744269 . + 0 Parent=GSCOCT00025526001 | |
| 56906 chr11 manual_curation gene 10787261 10802331 . + . ID=GSCOCG00025525001;Name=Cc11_g02820 | |
| 56907 chr11 manual_curation mRNA 10787261 10802331 . + . ID=GSCOCT00025525001;Parent=GSCOCG00025525001;Name=Cc11_g02820 | |
| 56908 chr11 manual_curation polypeptide 10787450 10802079 . + . ID=GSCOCP00025525001;Dbxref=GENE3D:G3DSA:1.25.40.20,InterPro:IPR002110,InterPro:IPR020683,PFAM:PF00023,PROFILE:PS50088,PROFILE:PS50297,SMART:SM00248,SUPERFAMILY:SSF48403,SwissProt:P81069,SwissProt:Q9HFE7,SwissProt:Q9SAR5,TAIR:AT2G17390.1,TAIR:AT4G35450.5,TAIR:AT5G12320.1,TrEMBL:A9PBK0,TrEMBL:B9HNG0,TrEMBL:D7T159;Derives_from=GSCOCT00025525001;Name=Cc11_g02820;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Ankyrin repeat-containing protein P16F5.05c,CC_functional_completeness:modules,CC_gene:AKR2,CC_gene:SPBP16F5.05c,CC_gene:Gabpb2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025525001~ Putative Ankyrin repeat-containing protein P16F5.05c~ AKR2~ modules;original_location=complement(join(1691255..1691332%2C1690447..1690534%2C1688238..1688302%2C1677049..1677117%2C1676910..1676959%2C1676703..1676814));owner=coffea | |
| 56909 chr11 manual_curation exon 10801968 10802331 . + . Parent=GSCOCT00025525001 | |
| 56910 chr11 manual_curation exon 10801823 10801872 . + . Parent=GSCOCT00025525001 | |
| 56911 chr11 manual_curation exon 10801665 10801733 . + . Parent=GSCOCT00025525001 | |
| 56912 chr11 manual_curation exon 10790480 10790544 . + . Parent=GSCOCT00025525001 | |
| 56913 chr11 manual_curation exon 10788248 10788335 . + . Parent=GSCOCT00025525001 | |
| 56914 chr11 manual_curation exon 10787261 10787527 . + . Parent=GSCOCT00025525001 | |
| 56915 chr11 manual_curation CDS 10801968 10802079 . + 2 Parent=GSCOCT00025525001 | |
| 56916 chr11 manual_curation CDS 10801823 10801872 . + 0 Parent=GSCOCT00025525001 | |
| 56917 chr11 manual_curation CDS 10801665 10801733 . + 0 Parent=GSCOCT00025525001 | |
| 56918 chr11 manual_curation CDS 10790480 10790544 . + 1 Parent=GSCOCT00025525001 | |
| 56919 chr11 manual_curation CDS 10788248 10788335 . + 0 Parent=GSCOCT00025525001 | |
| 56920 chr11 manual_curation CDS 10787450 10787527 . + 0 Parent=GSCOCT00025525001 | |
| 56921 chr11 manual_curation gene 10807347 10810770 . - . ID=GSCOCG00025524001;Name=Cc11_g02830 | |
| 56922 chr11 manual_curation mRNA 10807347 10810770 . - . ID=GSCOCT00025524001;Parent=GSCOCG00025524001;Name=Cc11_g02830 | |
| 56923 chr11 manual_curation polypeptide 10807717 10810770 . - . ID=GSCOCP00025524001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:Q8LPB4,SwissProt:Q9FN37,SwissProt:Q9ZVR7,TAIR:AT1G72300.1,TAIR:AT2G02220.1,TAIR:AT5G53890.1,TrEMBL:B9HJQ2,TrEMBL:B9HVM3,TrEMBL:B9RY42;Derives_from=GSCOCT00025524001;Name=Cc11_g02830;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Phytosulfokine receptor 1,CC_functional_completeness:complete,CC_gene:PSKR,CC_gene:PSKR1,CC_gene:PSKR2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025524001~ Phytosulfokine receptor 1~ PSKR~ complete;original_location=1668012..1671065;owner=coffea | |
| 56924 chr11 manual_curation exon 10807347 10810770 . - . Parent=GSCOCT00025524001 | |
| 56925 chr11 manual_curation CDS 10807717 10810770 . - 0 Parent=GSCOCT00025524001 | |
| 56926 chr11 manual_curation gene 10827078 10828003 . - . ID=GSCOCG00025522001;Name=Cc11_g02840 | |
| 56927 chr11 manual_curation mRNA 10827078 10828003 . - . ID=GSCOCT00025522001;Parent=GSCOCG00025522001;Name=Cc11_g02840 | |
| 56928 chr11 manual_curation polypeptide 10827078 10828003 . - . ID=GSCOCP00025522001;Dbxref=InterPro:IPR006747,PFAM:PF04654,TAIR:AT3G18215.1,TAIR:AT5G10580.1,TAIR:AT5G24600.1,TrEMBL:G7K655,TrEMBL:I1JH74,TrEMBL:I1MB64;Derives_from=GSCOCT00025522001;Name=Cc11_g02840;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of unknown function%2C DUF599,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025522001~ Putative Protein of unknown function%2C DUF599~ unknown_gene~ complete;original_location=join(1650779..1650985%2C1651109..1651153%2C1651189..1651704);owner=coffea | |
| 56929 chr11 manual_curation exon 10827797 10828003 . - . Parent=GSCOCT00025522001 | |
| 56930 chr11 manual_curation exon 10827629 10827673 . - . Parent=GSCOCT00025522001 | |
| 56931 chr11 manual_curation exon 10827078 10827593 . - . Parent=GSCOCT00025522001 | |
| 56932 chr11 manual_curation CDS 10827797 10828003 . - 0 Parent=GSCOCT00025522001 | |
| 56933 chr11 manual_curation CDS 10827629 10827673 . - 0 Parent=GSCOCT00025522001 | |
| 56934 chr11 manual_curation CDS 10827078 10827593 . - 0 Parent=GSCOCT00025522001 | |
| 56935 chr11 manual_curation gene 10843224 10853901 . + . ID=GSCOCG00025521001;Name=Cc11_g02850 | |
| 56936 chr11 manual_curation mRNA 10843224 10853901 . + . ID=GSCOCT00025521001;Parent=GSCOCG00025521001;Name=Cc11_g02850 | |
| 56937 chr11 manual_curation polypeptide 10843224 10853901 . + . ID=GSCOCP00025521001;Dbxref=InterPro:IPR001650,InterPro:IPR011545,InterPro:IPR014001,InterPro:IPR014021,PFAM:PF00270,PFAM:PF00271,PROFILE:PS51192,PROFILE:PS51194,SMART:SM00487,SMART:SM00490,SwissProt:Q0DWT8,SwissProt:Q6DRI7,SwissProt:Q7FGZ2,TAIR:AT4G15850.1,TAIR:AT4G16630.1,TAIR:AT5G60990.1,TrEMBL:B9H0T9,TrEMBL:D7MAB9,TrEMBL:D7TKB7;Derives_from=GSCOCT00025521001;Name=Cc11_g02850;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0004386,GO:0005524,GO:0008026,CC_EC_number:missing_EC_number,PRODUCT:DEAD-box ATP-dependent RNA helicase 1,CC_functional_completeness:complete,CC_gene:RH1,CC_gene:Os02g0795900,CC_gene:ddx51;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025521001~ DEAD-box ATP-dependent RNA helicase 1~ RH1~ complete;original_location=complement(join(1635401..1635558%2C1634729..1634963%2C1634029..1634283%2C1633368..1633519%2C1631873..1632050%2C1629381..1629568%2C1626950..1627154%2C1625344..1625449%2C1624881..1624945));owner=coffea | |
| 56938 chr11 manual_curation exon 10853837 10853901 . + . Parent=GSCOCT00025521001 | |
| 56939 chr11 manual_curation exon 10853333 10853438 . + . Parent=GSCOCT00025521001 | |
| 56940 chr11 manual_curation exon 10851628 10851832 . + . Parent=GSCOCT00025521001 | |
| 56941 chr11 manual_curation exon 10849214 10849401 . + . Parent=GSCOCT00025521001 | |
| 56942 chr11 manual_curation exon 10846732 10846909 . + . Parent=GSCOCT00025521001 | |
| 56943 chr11 manual_curation exon 10845263 10845414 . + . Parent=GSCOCT00025521001 | |
| 56944 chr11 manual_curation exon 10844499 10844753 . + . Parent=GSCOCT00025521001 | |
| 56945 chr11 manual_curation exon 10843819 10844053 . + . Parent=GSCOCT00025521001 | |
| 56946 chr11 manual_curation exon 10843224 10843381 . + . Parent=GSCOCT00025521001 | |
| 56947 chr11 manual_curation CDS 10853837 10853901 . + 1 Parent=GSCOCT00025521001 | |
| 56948 chr11 manual_curation CDS 10853333 10853438 . + 0 Parent=GSCOCT00025521001 | |
| 56949 chr11 manual_curation CDS 10851628 10851832 . + 2 Parent=GSCOCT00025521001 | |
| 56950 chr11 manual_curation CDS 10849214 10849401 . + 0 Parent=GSCOCT00025521001 | |
| 56951 chr11 manual_curation CDS 10846732 10846909 . + 2 Parent=GSCOCT00025521001 | |
| 56952 chr11 manual_curation CDS 10845263 10845414 . + 0 Parent=GSCOCT00025521001 | |
| 56953 chr11 manual_curation CDS 10844499 10844753 . + 0 Parent=GSCOCT00025521001 | |
| 56954 chr11 manual_curation CDS 10843819 10844053 . + 2 Parent=GSCOCT00025521001 | |
| 56955 chr11 manual_curation CDS 10843224 10843381 . + 0 Parent=GSCOCT00025521001 | |
| 56956 chr11 manual_curation gene 10857983 10871926 . - . ID=GSCOCG00025520001;Name=Cc11_g02860 | |
| 56957 chr11 manual_curation mRNA 10857983 10871926 . - . ID=GSCOCT00025520001;Parent=GSCOCG00025520001;Name=Cc11_g02860 | |
| 56958 chr11 manual_curation polypeptide 10859514 10871530 . - . ID=GSCOCP00025520001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019775,InterPro:IPR019781,InterPro:IPR019782,InterPro:IPR020472,PFAM:PF00400,PRINTS:PR00320,PROFILE:PS50082,PROFILE:PS50294,PROSITE:PS00678,SMART:SM00320,SUPERFAMILY:SSF50978,SwissProt:Q13685,SwissProt:Q5RCG7,SwissProt:Q7YR70,TAIR:AT1G71840.1,TAIR:AT3G49660.1,TAIR:AT4G02730.1,TrEMBL:A5AZU2,TrEMBL:D7TB79,TrEMBL:D7TXU7;Derives_from=GSCOCT00025520001;Name=Cc11_g02860;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.7.11.7,PRODUCT:Putative Angio-associated migratory cell protein,CC_functional_completeness:complete,CC_gene:AAMP;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025520001~ Putative Angio-associated migratory cell protein~ AAMP~ complete;original_location=join(1607252..1607357%2C1608147..1608194%2C1608517..1608558%2C1609030..1609149%2C1609293..1609438%2C1609522..1609669%2C1609743..1609826%2C1612293..1612408%2C1612533..1612594%2C1618754..1618844%2C1619041..1619268);owner=coffea | |
| 56959 chr11 manual_curation exon 10871718 10871926 . - . Parent=GSCOCT00025520001 | |
| 56960 chr11 manual_curation exon 10871425 10871538 . - . Parent=GSCOCT00025520001 | |
| 56961 chr11 manual_curation exon 10870588 10870635 . - . Parent=GSCOCT00025520001 | |
| 56962 chr11 manual_curation exon 10870224 10870265 . - . Parent=GSCOCT00025520001 | |
| 56963 chr11 manual_curation exon 10869633 10869752 . - . Parent=GSCOCT00025520001 | |
| 56964 chr11 manual_curation exon 10869344 10869489 . - . Parent=GSCOCT00025520001 | |
| 56965 chr11 manual_curation exon 10869113 10869260 . - . Parent=GSCOCT00025520001 | |
| 56966 chr11 manual_curation exon 10868956 10869039 . - . Parent=GSCOCT00025520001 | |
| 56967 chr11 manual_curation exon 10866374 10866489 . - . Parent=GSCOCT00025520001 | |
| 56968 chr11 manual_curation exon 10866188 10866249 . - . Parent=GSCOCT00025520001 | |
| 56969 chr11 manual_curation exon 10859938 10860028 . - . Parent=GSCOCT00025520001 | |
| 56970 chr11 manual_curation exon 10857983 10859741 . - . Parent=GSCOCT00025520001 | |
| 56971 chr11 manual_curation CDS 10871425 10871530 . - 0 Parent=GSCOCT00025520001 | |
| 56972 chr11 manual_curation CDS 10870588 10870635 . - 1 Parent=GSCOCT00025520001 | |
| 56973 chr11 manual_curation CDS 10870224 10870265 . - 1 Parent=GSCOCT00025520001 | |
| 56974 chr11 manual_curation CDS 10869633 10869752 . - 1 Parent=GSCOCT00025520001 | |
| 56975 chr11 manual_curation CDS 10869344 10869489 . - 1 Parent=GSCOCT00025520001 | |
| 56976 chr11 manual_curation CDS 10869113 10869260 . - 0 Parent=GSCOCT00025520001 | |
| 56977 chr11 manual_curation CDS 10868956 10869039 . - 1 Parent=GSCOCT00025520001 | |
| 56978 chr11 manual_curation CDS 10866374 10866489 . - 1 Parent=GSCOCT00025520001 | |
| 56979 chr11 manual_curation CDS 10866188 10866249 . - 0 Parent=GSCOCT00025520001 | |
| 56980 chr11 manual_curation CDS 10859938 10860028 . - 2 Parent=GSCOCT00025520001 | |
| 56981 chr11 manual_curation CDS 10859514 10859741 . - 0 Parent=GSCOCT00025520001 | |
| 56982 chr11 manual_curation gene 10895285 10897859 . - . ID=GSCOCG00025518001;Name=Cc11_g02870 | |
| 56983 chr11 manual_curation mRNA 10895285 10897859 . - . ID=GSCOCT00025518001;Parent=GSCOCG00025518001;Name=Cc11_g02870 | |
| 56984 chr11 manual_curation polypeptide 10896012 10897859 . - . ID=GSCOCP00025518001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q66GP4,SwissProt:Q8L844,SwissProt:Q9M9X9,TAIR:AT1G06710.1,TAIR:AT5G13770.1,TAIR:AT5G42310.1,TIGRFAMs:TIGR00756,TrEMBL:B9HVN2,TrEMBL:F6H9R2,TrEMBL:I1ND42;Derives_from=GSCOCT00025518001;Name=Cc11_g02870;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At5g13770%2C chloroplastic,CC_functional_completeness:complete,CC_gene:At5g13770,CC_gene:At1g06710,CC_gene:At5g42310;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025518001~ Pentatricopeptide repeat-containing protein At5g13770%2C chloroplastic~ At5g13770~ complete;original_location=1580923..1582770;owner=coffea | |
| 56985 chr11 manual_curation exon 10895285 10897859 . - . Parent=GSCOCT00025518001 | |
| 56986 chr11 manual_curation CDS 10896012 10897859 . - 0 Parent=GSCOCT00025518001 | |
| 56987 chr11 manual_curation gene 11014544 11016743 . + . ID=GSCOCG00025514001;Name=Cc11_g02880 | |
| 56988 chr11 manual_curation mRNA 11014544 11016743 . + . ID=GSCOCT00025514001;Parent=GSCOCG00025514001;Name=Cc11_g02880 | |
| 56989 chr11 manual_curation polypeptide 11014544 11016743 . + . ID=GSCOCP00025514001;Dbxref=InterPro:IPR003656,InterPro:IPR007021,InterPro:IPR008906,PFAM:PF02892,PFAM:PF04937,PFAM:PF05699,TAIR:AT3G13010.1,TAIR:AT3G13020.1,TAIR:AT3G13030.1,TrEMBL:B9HG19,TrEMBL:B9HQG2,TrEMBL:B9SWK8;Derives_from=GSCOCT00025514001;Name=Cc11_g02880;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0046983,CC_EC_number:missing_EC_number,PRODUCT:Putative hAT transposon superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025514001~ Putative hAT transposon superfamily protein~ unknown_gene~ complete;original_location=complement(join(1463958..1464238%2C1462522..1463882%2C1462039..1462439));owner=coffea | |
| 56990 chr11 manual_curation exon 11016343 11016743 . + . Parent=GSCOCT00025514001 | |
| 56991 chr11 manual_curation exon 11014900 11016260 . + . Parent=GSCOCT00025514001 | |
| 56992 chr11 manual_curation exon 11014544 11014824 . + . Parent=GSCOCT00025514001 | |
| 56993 chr11 manual_curation CDS 11016343 11016743 . + 1 Parent=GSCOCT00025514001 | |
| 56994 chr11 manual_curation CDS 11014900 11016260 . + 2 Parent=GSCOCT00025514001 | |
| 56995 chr11 manual_curation CDS 11014544 11014824 . + 0 Parent=GSCOCT00025514001 | |
| 56996 chr11 manual_curation gene 11082739 11083174 . - . ID=GSCOCG00025511001;Name=Cc11_g02890 | |
| 56997 chr11 manual_curation mRNA 11082739 11083174 . - . ID=GSCOCT00025511001;Parent=GSCOCG00025511001;Name=Cc11_g02890 | |
| 56998 chr11 manual_curation polypeptide 11082739 11082942 . - . ID=GSCOCP00025511001;Derives_from=GSCOCT00025511001;Name=Cc11_g02890;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025511001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1395840..1396043;owner=coffea | |
| 56999 chr11 manual_curation exon 11082739 11083174 . - . Parent=GSCOCT00025511001 | |
| 57000 chr11 manual_curation CDS 11082739 11082942 . - 0 Parent=GSCOCT00025511001 | |
| 57001 chr11 manual_curation gene 11085565 11093025 . + . ID=GSCOCG00025510001;Name=Cc11_g02900 | |
| 57002 chr11 manual_curation mRNA 11085565 11093025 . + . ID=GSCOCT00025510001;Parent=GSCOCG00025510001;Name=Cc11_g02900 | |
| 57003 chr11 manual_curation polypeptide 11085565 11091958 . + . ID=GSCOCP00025510001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:P0C8S1,SwissProt:Q9FJB5,SwissProt:Q9SX38,TAIR:AT1G50180.1,TAIR:AT1G53350.1,TAIR:AT5G35450.1,TrEMBL:A5BY94,TrEMBL:B9S717,TrEMBL:G7IID2;Derives_from=GSCOCT00025510001;Name=Cc11_g02900;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable disease resistance RPP8-like protein 2,CC_functional_completeness:complete,CC_gene:RPP8L2,CC_gene:RPP8L3,CC_gene:At1g50180;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025510001~ Putative Probable disease resistance RPP8-like protein 2~ RPP8L2~ complete;original_location=complement(join(1392173..1393217%2C1388980..1390756%2C1386824..1386884));owner=coffea | |
| 57004 chr11 manual_curation exon 11091898 11093025 . + . Parent=GSCOCT00025510001 | |
| 57005 chr11 manual_curation exon 11088026 11089802 . + . Parent=GSCOCT00025510001 | |
| 57006 chr11 manual_curation exon 11085565 11086609 . + . Parent=GSCOCT00025510001 | |
| 57007 chr11 manual_curation CDS 11091898 11091958 . + 2 Parent=GSCOCT00025510001 | |
| 57008 chr11 manual_curation CDS 11088026 11089802 . + 1 Parent=GSCOCT00025510001 | |
| 57009 chr11 manual_curation CDS 11085565 11086609 . + 0 Parent=GSCOCT00025510001 | |
| 57010 chr11 manual_curation gene 11096395 11096747 . + . ID=GSCOCG00025509001;Name=Cc11_g02910 | |
| 57011 chr11 manual_curation mRNA 11096395 11096747 . + . ID=GSCOCT00025509001;Parent=GSCOCG00025509001;Name=Cc11_g02910 | |
| 57012 chr11 manual_curation polypeptide 11096395 11096747 . + . ID=GSCOCP00025509001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR001944,InterPro:IPR013781,PANTHER:PTHR23421,PFAM:PF01301,PRINTS:PR00742,SwissProt:P48981,SwissProt:Q10NX8,SwissProt:Q9SCV4,TAIR:AT2G28470.1,TAIR:AT3G52840.1,TAIR:AT5G20710.1,TrEMBL:E3UVW7,TrEMBL:G7JPE5,TrEMBL:Q9LLT0;Derives_from=GSCOCT00025509001;Name=Cc11_g02910;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0043169,CC_EC_number:3.2.1.23,PRODUCT:Beta-galactosidase,CC_functional_completeness:fragment,CC_gene:BGAL8,CC_gene:Os03g0255100;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025509001~ Beta-galactosidase~ BGAL8~ fragment;original_location=complement(join(1382217..1382387%2C1382035..1382085));owner=coffea | |
| 57013 chr11 manual_curation exon 11096697 11096747 . + . Parent=GSCOCT00025509001 | |
| 57014 chr11 manual_curation exon 11096395 11096565 . + . Parent=GSCOCT00025509001 | |
| 57015 chr11 manual_curation CDS 11096697 11096747 . + 0 Parent=GSCOCT00025509001 | |
| 57016 chr11 manual_curation CDS 11096395 11096565 . + 0 Parent=GSCOCT00025509001 | |
| 57017 chr11 manual_curation gene 11104642 11105298 . + . ID=GSCOCG00025506001;Name=Cc11_g02920 | |
| 57018 chr11 manual_curation mRNA 11104642 11105298 . + . ID=GSCOCT00025506001;Parent=GSCOCG00025506001;Name=Cc11_g02920 | |
| 57019 chr11 manual_curation polypeptide 11104642 11105298 . + . ID=GSCOCP00025506001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:P0C8S1,SwissProt:Q9M667,SwissProt:Q9SX38,TAIR:AT1G50180.1,TAIR:AT1G53350.1,TAIR:AT3G46530.1,TrEMBL:A5BY94,TrEMBL:B9S717,TrEMBL:F6HCD0;Derives_from=GSCOCT00025506001;Name=Cc11_g02920;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance protein At1g50180,CC_functional_completeness:fragment,CC_gene:At1g50180,CC_gene:RPP13,CC_gene:RPP8L2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025506001~ Putative disease resistance protein At1g50180~ At1g50180~ fragment;original_location=complement(1373484..1374140);owner=coffea | |
| 57020 chr11 manual_curation exon 11104642 11105298 . + . Parent=GSCOCT00025506001 | |
| 57021 chr11 manual_curation CDS 11104642 11105298 . + 0 Parent=GSCOCT00025506001 | |
| 57022 chr11 manual_curation gene 11108638 11109024 . + . ID=GSCOCG00025505001;Name=Cc11_g02930 | |
| 57023 chr11 manual_curation mRNA 11108638 11109024 . + . ID=GSCOCT00025505001;Parent=GSCOCG00025505001;Name=Cc11_g02930 | |
| 57024 chr11 manual_curation polypeptide 11108638 11109024 . + . ID=GSCOCP00025505001;Dbxref=InterPro:IPR002182,PFAM:PF00931,SwissProt:P0C8S1,SwissProt:Q8W474,SwissProt:Q9SX38,TAIR:AT1G50180.1,TAIR:AT1G53350.1,TAIR:AT1G58390.1,TrEMBL:F6HCD2,TrEMBL:F6I153,TrEMBL:G0XZC6;Derives_from=GSCOCT00025505001;Name=Cc11_g02930;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable disease resistance RPP8-like protein 2,CC_functional_completeness:fragment,CC_gene:RPP8L2,CC_gene:At1g50180,CC_gene:At1g58390;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025505001~ Putative Probable disease resistance RPP8-like protein 2~ RPP8L2~ fragment;original_location=complement(1369758..1370144);owner=coffea | |
| 57025 chr11 manual_curation exon 11108638 11109024 . + . Parent=GSCOCT00025505001 | |
| 57026 chr11 manual_curation CDS 11108638 11109024 . + 0 Parent=GSCOCT00025505001 | |
| 57027 chr11 manual_curation gene 11157638 11157859 . + . ID=GSCOCG00025502001;Name=Cc11_g02940 | |
| 57028 chr11 manual_curation mRNA 11157638 11157859 . + . ID=GSCOCT00025502001;Parent=GSCOCG00025502001;Name=Cc11_g02940 | |
| 57029 chr11 manual_curation polypeptide 11157638 11157859 . + . ID=GSCOCP00025502001;Derives_from=GSCOCT00025502001;Name=Cc11_g02940;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025502001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(1320923..1321144);owner=coffea | |
| 57030 chr11 manual_curation exon 11157638 11157859 . + . Parent=GSCOCT00025502001 | |
| 57031 chr11 manual_curation CDS 11157638 11157859 . + 0 Parent=GSCOCT00025502001 | |
| 57032 chr11 manual_curation gene 11191012 11191227 . + . ID=GSCOCG00025499001;Name=Cc11_g02950 | |
| 57033 chr11 manual_curation mRNA 11191012 11191227 . + . ID=GSCOCT00025499001;Parent=GSCOCG00025499001;Name=Cc11_g02950 | |
| 57034 chr11 manual_curation polypeptide 11191012 11191227 . + . ID=GSCOCP00025499001;Derives_from=GSCOCT00025499001;Name=Cc11_g02950;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025499001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(1287555..1287770);owner=coffea | |
| 57035 chr11 manual_curation exon 11191012 11191227 . + . Parent=GSCOCT00025499001 | |
| 57036 chr11 manual_curation CDS 11191012 11191227 . + 0 Parent=GSCOCT00025499001 | |
| 57037 chr11 manual_curation gene 11203946 11207773 . + . ID=GSCOCG00025496001;Name=Cc11_g02960 | |
| 57038 chr11 manual_curation mRNA 11203946 11207773 . + . ID=GSCOCT00025496001;Parent=GSCOCG00025496001;Name=Cc11_g02960 | |
| 57039 chr11 manual_curation polypeptide 11203946 11207773 . + . ID=GSCOCP00025496001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,InterPro:IPR021929,PFAM:PF00931,PFAM:PF12061,PRINTS:PR00364,SwissProt:Q60CZ8,SwissProt:Q6L438,SwissProt:Q8W1E0,TAIR:AT1G59780.1,TAIR:AT3G46530.1,TAIR:AT5G43470.1,TrEMBL:Q96485,TrEMBL:Q9LLD0,TrEMBL:Q9LLD4;Derives_from=GSCOCT00025496001;Name=Cc11_g02960;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1A-6,CC_functional_completeness:fragment,CC_gene:R1A-6,CC_gene:R1A-10,CC_gene:R1A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025496001~ Putative late blight resistance protein homolog R1A-6~ R1A-6~ fragment;original_location=complement(1271009..1274836);owner=coffea | |
| 57040 chr11 manual_curation exon 11203946 11207773 . + . Parent=GSCOCT00025496001 | |
| 57041 chr11 manual_curation CDS 11203946 11207773 . + 0 Parent=GSCOCT00025496001 | |
| 57042 chr11 manual_curation gene 11237077 11241764 . - . ID=GSCOCG00025494001;Name=Cc11_g02970 | |
| 57043 chr11 manual_curation mRNA 11237077 11241764 . - . ID=GSCOCT00025494001;Parent=GSCOCG00025494001;Name=Cc11_g02970 | |
| 57044 chr11 manual_curation polypeptide 11237366 11240341 . - . ID=GSCOCP00025494001;Dbxref=InterPro:IPR003656,InterPro:IPR007021,InterPro:IPR008906,PFAM:PF02892,PFAM:PF04937,PFAM:PF05699,TAIR:AT3G13010.1,TAIR:AT3G13020.1,TAIR:AT3G13030.1,TrEMBL:B9HG19,TrEMBL:B9HQG2,TrEMBL:B9SWK8;Derives_from=GSCOCT00025494001;Name=Cc11_g02970;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0046983,CC_EC_number:missing_EC_number,PRODUCT:Putative hAT transposon superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025494001~ Putative hAT transposon superfamily protein~ unknown_gene~ complete;original_location=join(1238441..1238762%2C1238841..1240157%2C1240238..1240609%2C1241379..1241416);owner=coffea | |
| 57045 chr11 manual_curation exon 11241246 11241764 . - . Parent=GSCOCT00025494001 | |
| 57046 chr11 manual_curation exon 11240020 11240421 . - . Parent=GSCOCT00025494001 | |
| 57047 chr11 manual_curation exon 11238625 11239941 . - . Parent=GSCOCT00025494001 | |
| 57048 chr11 manual_curation exon 11238173 11238544 . - . Parent=GSCOCT00025494001 | |
| 57049 chr11 manual_curation exon 11237077 11237403 . - . Parent=GSCOCT00025494001 | |
| 57050 chr11 manual_curation CDS 11240020 11240341 . - 0 Parent=GSCOCT00025494001 | |
| 57051 chr11 manual_curation CDS 11238625 11239941 . - 1 Parent=GSCOCT00025494001 | |
| 57052 chr11 manual_curation CDS 11238173 11238544 . - 1 Parent=GSCOCT00025494001 | |
| 57053 chr11 manual_curation CDS 11237366 11237403 . - 1 Parent=GSCOCT00025494001 | |
| 57054 chr11 manual_curation gene 11252696 11256311 . - . ID=GSCOCG00025493001;Name=Cc11_g02980 | |
| 57055 chr11 manual_curation mRNA 11252696 11256311 . - . ID=GSCOCT00025493001;Parent=GSCOCG00025493001;Name=Cc11_g02980 | |
| 57056 chr11 manual_curation polypeptide 11253232 11256230 . - . ID=GSCOCP00025493001;Dbxref=SwissProt:Q8VYU8,SwissProt:Q9LSS5,SwissProt:Q9ZQC5,TAIR:AT2G37080.1,TAIR:AT3G53350.1,TAIR:AT5G60210.1,TrEMBL:B9IJ05,TrEMBL:B9SGR1,TrEMBL:Q8VXD2;Derives_from=GSCOCT00025493001;Name=Cc11_g02980;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Interactor of constitutive active ROPs 2%2C chloroplastic,CC_functional_completeness:complete,CC_gene:ICR2,CC_gene:ICR3,CC_gene:ICR5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025493001~ Interactor of constitutive active ROPs 2%2C chloroplastic~ ICR2~ complete;original_location=join(1222552..1222571%2C1223126..1223306%2C1223895..1225550);owner=coffea | |
| 57057 chr11 manual_curation exon 11256211 11256311 . - . Parent=GSCOCT00025493001 | |
| 57058 chr11 manual_curation exon 11255476 11255656 . - . Parent=GSCOCT00025493001 | |
| 57059 chr11 manual_curation exon 11252696 11254887 . - . Parent=GSCOCT00025493001 | |
| 57060 chr11 manual_curation CDS 11256211 11256230 . - 0 Parent=GSCOCT00025493001 | |
| 57061 chr11 manual_curation CDS 11255476 11255656 . - 2 Parent=GSCOCT00025493001 | |
| 57062 chr11 manual_curation CDS 11253232 11254887 . - 0 Parent=GSCOCT00025493001 | |
| 57063 chr11 manual_curation gene 11280333 11286244 . - . ID=GSCOCG00025490001;Name=Cc11_g02990 | |
| 57064 chr11 manual_curation mRNA 11280333 11286244 . - . ID=GSCOCT00025490001;Parent=GSCOCG00025490001;Name=Cc11_g02990 | |
| 57065 chr11 manual_curation polypeptide 11281281 11286244 . - . ID=GSCOCP00025490001;Dbxref=GENE3D:G3DSA:2.30.30.210,InterPro:IPR002730,InterPro:IPR016848,PFAM:PF01868,PIR:PIRSF027081,SMART:SM00538,SUPERFAMILY:SSF101744,SwissProt:O95707,SwissProt:Q2KIB9,SwissProt:Q5R7B0,TAIR:AT2G43190.1,TrEMBL:B9GLV5,TrEMBL:D7TQH0,TrEMBL:I1LG21;Derives_from=GSCOCT00025490001;Name=Cc11_g02990;Ontology_term=CC_evidence_code:ISS,GO:0000172,GO:0003723,GO:0004540,GO:0005655,GO:0006364,GO:0006379,GO:0008033,GO:0030677,CC_EC_number:missing_EC_number,PRODUCT:Putative ribonuclease P family protein,CC_functional_completeness:complete,CC_gene:POP4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025490001~ Putative ribonuclease P family protein~ POP4~ complete;original_location=join(1192538..1192751%2C1193164..1193199%2C1193344..1193414%2C1193534..1193796%2C1194691..1194759%2C1194912..1194970%2C1195548..1195649%2C1197404..1197501);owner=coffea | |
| 57066 chr11 manual_curation exon 11286031 11286244 . - . Parent=GSCOCT00025490001 | |
| 57067 chr11 manual_curation exon 11285583 11285618 . - . Parent=GSCOCT00025490001 | |
| 57068 chr11 manual_curation exon 11285368 11285438 . - . Parent=GSCOCT00025490001 | |
| 57069 chr11 manual_curation exon 11284986 11285248 . - . Parent=GSCOCT00025490001 | |
| 57070 chr11 manual_curation exon 11284023 11284091 . - . Parent=GSCOCT00025490001 | |
| 57071 chr11 manual_curation exon 11283812 11283870 . - . Parent=GSCOCT00025490001 | |
| 57072 chr11 manual_curation exon 11283133 11283234 . - . Parent=GSCOCT00025490001 | |
| 57073 chr11 manual_curation exon 11280333 11281378 . - . Parent=GSCOCT00025490001 | |
| 57074 chr11 manual_curation CDS 11286031 11286244 . - 0 Parent=GSCOCT00025490001 | |
| 57075 chr11 manual_curation CDS 11285583 11285618 . - 1 Parent=GSCOCT00025490001 | |
| 57076 chr11 manual_curation CDS 11285368 11285438 . - 1 Parent=GSCOCT00025490001 | |
| 57077 chr11 manual_curation CDS 11284986 11285248 . - 0 Parent=GSCOCT00025490001 | |
| 57078 chr11 manual_curation CDS 11284023 11284091 . - 2 Parent=GSCOCT00025490001 | |
| 57079 chr11 manual_curation CDS 11283812 11283870 . - 2 Parent=GSCOCT00025490001 | |
| 57080 chr11 manual_curation CDS 11283133 11283234 . - 1 Parent=GSCOCT00025490001 | |
| 57081 chr11 manual_curation CDS 11281281 11281378 . - 1 Parent=GSCOCT00025490001 | |
| 57082 chr11 manual_curation gene 11299967 11303997 . - . ID=GSCOCG00025489001;Name=Cc11_g03000 | |
| 57083 chr11 manual_curation mRNA 11299967 11303997 . - . ID=GSCOCT00025489001;Parent=GSCOCG00025489001;Name=Cc11_g03000 | |
| 57084 chr11 manual_curation polypeptide 11300179 11300484 . - . ID=GSCOCP00025489001;Derives_from=GSCOCT00025489001;Name=Cc11_g03000;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025489001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1178298..1178603;owner=coffea | |
| 57085 chr11 manual_curation exon 11303750 11303997 . - . Parent=GSCOCT00025489001 | |
| 57086 chr11 manual_curation exon 11301966 11302108 . - . Parent=GSCOCT00025489001 | |
| 57087 chr11 manual_curation exon 11299967 11301612 . - . Parent=GSCOCT00025489001 | |
| 57088 chr11 manual_curation CDS 11300179 11300484 . - 0 Parent=GSCOCT00025489001 | |
| 57089 chr11 manual_curation gene 11317156 11318762 . - . ID=GSCOCG00025488001;Name=Cc11_g03010 | |
| 57090 chr11 manual_curation mRNA 11317156 11318762 . - . ID=GSCOCT00025488001;Parent=GSCOCG00025488001;Name=Cc11_g03010 | |
| 57091 chr11 manual_curation polypeptide 11317653 11318678 . - . ID=GSCOCP00025488001;Dbxref=GENE3D:G3DSA:1.25.40.10,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR019734,PROFILE:PS50293,SMART:SM00028,TAIR:AT2G37400.1,TAIR:AT3G18420.1,TAIR:AT4G39470.1,TrEMBL:B9HVN0,TrEMBL:B9RY34,TrEMBL:F6HG16;Derives_from=GSCOCT00025488001;Name=Cc11_g03010;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:Protein prenylyltransferase superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025488001~ Protein prenylyltransferase superfamily protein~ unknown_gene~ complete;original_location=1160104..1161129;owner=coffea | |
| 57092 chr11 manual_curation exon 11317156 11318762 . - . Parent=GSCOCT00025488001 | |
| 57093 chr11 manual_curation CDS 11317653 11318678 . - 0 Parent=GSCOCT00025488001 | |
| 57094 chr11 manual_curation gene 11322782 11324369 . + . ID=GSCOCG00025487001;Name=Cc11_g03020 | |
| 57095 chr11 manual_curation mRNA 11322782 11324369 . + . ID=GSCOCT00025487001;Parent=GSCOCG00025487001;Name=Cc11_g03020 | |
| 57096 chr11 manual_curation polypeptide 11322782 11324369 . + . ID=GSCOCP00025487001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,SwissProt:Q9FI98,SwissProt:Q9LTH2,SwissProt:Q9SNB1,TAIR:AT3G11340.1,TAIR:AT5G05880.1,TAIR:AT5G59590.1,TrEMBL:A5BH14,TrEMBL:B9S396,TrEMBL:B9S398;Derives_from=GSCOCT00025487001;Name=Cc11_g03020;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:Putative UDP-glycosyltransferase 76E2,CC_functional_completeness:complete,CC_gene:UGT76E2,CC_gene:UGT76C4,CC_gene:UGT76E11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025487001~ Putative UDP-glycosyltransferase 76E2~ UGT76E2~ complete;original_location=complement(join(1155841..1156000%2C1155594..1155773%2C1154980..1155398%2C1154725..1154920%2C1154413..1154615));owner=coffea | |
| 57097 chr11 manual_curation exon 11324167 11324369 . + . Parent=GSCOCT00025487001 | |
| 57098 chr11 manual_curation exon 11323862 11324057 . + . Parent=GSCOCT00025487001 | |
| 57099 chr11 manual_curation exon 11323384 11323802 . + . Parent=GSCOCT00025487001 | |
| 57100 chr11 manual_curation exon 11323009 11323188 . + . Parent=GSCOCT00025487001 | |
| 57101 chr11 manual_curation exon 11322782 11322941 . + . Parent=GSCOCT00025487001 | |
| 57102 chr11 manual_curation CDS 11324167 11324369 . + 1 Parent=GSCOCT00025487001 | |
| 57103 chr11 manual_curation CDS 11323862 11324057 . + 0 Parent=GSCOCT00025487001 | |
| 57104 chr11 manual_curation CDS 11323384 11323802 . + 1 Parent=GSCOCT00025487001 | |
| 57105 chr11 manual_curation CDS 11323009 11323188 . + 1 Parent=GSCOCT00025487001 | |
| 57106 chr11 manual_curation CDS 11322782 11322941 . + 0 Parent=GSCOCT00025487001 | |
| 57107 chr11 manual_curation gene 11383353 11385242 . + . ID=GSCOCG00025485001;Name=Cc11_g03030 | |
| 57108 chr11 manual_curation mRNA 11383353 11385242 . + . ID=GSCOCT00025485001;Parent=GSCOCG00025485001;Name=Cc11_g03030 | |
| 57109 chr11 manual_curation polypeptide 11383353 11385242 . + . ID=GSCOCP00025485001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:C0LGP4,SwissProt:C0LGT6,SwissProt:Q9SD62,TAIR:AT3G47090.1,TAIR:AT3G47570.1,TAIR:AT5G20480.1,TrEMBL:B9I1J3,TrEMBL:B9T577,TrEMBL:F6HBU0;Derives_from=GSCOCT00025485001;Name=Cc11_g03030;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570,CC_functional_completeness:complete,CC_gene:At3g47570,CC_gene:EFR,CC_gene:At3g47110;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025485001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570~ At3g47570~ complete;original_location=complement(join(1094921..1095429%2C1093932..1094860%2C1093540..1093826));owner=coffea | |
| 57110 chr11 manual_curation exon 11384956 11385242 . + . Parent=GSCOCT00025485001 | |
| 57111 chr11 manual_curation exon 11383922 11384850 . + . Parent=GSCOCT00025485001 | |
| 57112 chr11 manual_curation exon 11383353 11383861 . + . Parent=GSCOCT00025485001 | |
| 57113 chr11 manual_curation CDS 11384956 11385242 . + 1 Parent=GSCOCT00025485001 | |
| 57114 chr11 manual_curation CDS 11383922 11384850 . + 2 Parent=GSCOCT00025485001 | |
| 57115 chr11 manual_curation CDS 11383353 11383861 . + 0 Parent=GSCOCT00025485001 | |
| 57116 chr11 manual_curation gene 11423025 11425794 . + . ID=GSCOCG00025483001;Name=Cc11_g03040 | |
| 57117 chr11 manual_curation mRNA 11423025 11425794 . + . ID=GSCOCT00025483001;Parent=GSCOCG00025483001;Name=Cc11_g03040 | |
| 57118 chr11 manual_curation polypeptide 11423025 11425794 . + . ID=GSCOCP00025483001;Dbxref=GENE3D:G3DSA:2.40.70.10,InterPro:IPR001461,InterPro:IPR009007,InterPro:IPR021109,PANTHER:PTHR13683,PFAM:PF00026,SUPERFAMILY:SSF50630,SwissProt:Q766C3,SwissProt:Q9LHE3,SwissProt:Q9LS40,TAIR:AT1G01300.1,TAIR:AT1G25510.1,TAIR:AT3G18490.1,TrEMBL:A9PCK2,TrEMBL:B9N2X4,TrEMBL:F6GTJ2;Derives_from=GSCOCT00025483001;Name=Cc11_g03040;Ontology_term=CC_evidence_code:ISS,GO:0004190,GO:0006508,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein ASPARTIC PROTEASE IN GUARD CELL 1,CC_functional_completeness:fragment,CC_gene:ASPG1,CC_gene:ASPG2,CC_gene:nep1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025483001~ Putative Protein ASPARTIC PROTEASE IN GUARD CELL 1~ ASPG1~ fragment;original_location=complement(join(1055168..1055757%2C1052988..1053375));owner=coffea | |
| 57119 chr11 manual_curation exon 11425407 11425794 . + . Parent=GSCOCT00025483001 | |
| 57120 chr11 manual_curation exon 11423025 11423614 . + . Parent=GSCOCT00025483001 | |
| 57121 chr11 manual_curation CDS 11425407 11425794 . + 2 Parent=GSCOCT00025483001 | |
| 57122 chr11 manual_curation CDS 11423025 11423614 . + 0 Parent=GSCOCT00025483001 | |
| 57123 chr11 manual_curation gene 11512742 11514031 . + . ID=GSCOCG00025479001;Name=Cc11_g03050 | |
| 57124 chr11 manual_curation mRNA 11512742 11514031 . + . ID=GSCOCT00025479001;Parent=GSCOCG00025479001;Name=Cc11_g03050 | |
| 57125 chr11 manual_curation polypeptide 11512742 11514031 . + . ID=GSCOCP00025479001;Dbxref=InterPro:IPR001757,InterPro:IPR004014,InterPro:IPR008250,PANTHER:PTHR11939,PFAM:PF00122,PFAM:PF00690,SwissProt:Q9LF79,SwissProt:Q9LIK7,SwissProt:Q9LY77,TAIR:AT3G22910.1,TAIR:AT3G63380.1,TAIR:AT5G57110.1,TrEMBL:F6HDV4,TrEMBL:F6HDV5,TrEMBL:F6HDV6;Derives_from=GSCOCT00025479001;Name=Cc11_g03050;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006754,GO:0006812,GO:0016020,CC_EC_number:3.6.3.8,PRODUCT:Putative calcium-transporting ATPase 13%2C plasma membrane-type,CC_functional_completeness:fragment,CC_gene:ACA13,CC_gene:ACA12,CC_gene:ACA8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025479001~ Putative calcium-transporting ATPase 13%2C plasma membrane-type~ ACA13~ fragment;original_location=complement(join(965612..966040%2C965433..965480%2C964968..965369%2C964751..964771));owner=coffea | |
| 57126 chr11 manual_curation exon 11514011 11514031 . + . Parent=GSCOCT00025479001 | |
| 57127 chr11 manual_curation exon 11513413 11513814 . + . Parent=GSCOCT00025479001 | |
| 57128 chr11 manual_curation exon 11513302 11513349 . + . Parent=GSCOCT00025479001 | |
| 57129 chr11 manual_curation exon 11512742 11513170 . + . Parent=GSCOCT00025479001 | |
| 57130 chr11 manual_curation CDS 11514011 11514031 . + 0 Parent=GSCOCT00025479001 | |
| 57131 chr11 manual_curation CDS 11513413 11513814 . + 0 Parent=GSCOCT00025479001 | |
| 57132 chr11 manual_curation CDS 11513302 11513349 . + 0 Parent=GSCOCT00025479001 | |
| 57133 chr11 manual_curation CDS 11512742 11513170 . + 0 Parent=GSCOCT00025479001 | |
| 57134 chr11 manual_curation gene 11514085 11515963 . + . ID=GSCOCG00025478001;Name=Cc11_g03060 | |
| 57135 chr11 manual_curation mRNA 11514085 11515963 . + . ID=GSCOCT00025478001;Parent=GSCOCG00025478001;Name=Cc11_g03060 | |
| 57136 chr11 manual_curation polypeptide 11514085 11515851 . + . ID=GSCOCP00025478001;Dbxref=InterPro:IPR000695,InterPro:IPR001757,InterPro:IPR005834,InterPro:IPR006068,InterPro:IPR018303,PANTHER:PTHR11939,PFAM:PF00689,PFAM:PF00702,PRINTS:PR00119,PRINTS:PR00120,PROSITE:PS00154,SwissProt:Q9LF79,SwissProt:Q9LIK7,SwissProt:Q9LY77,TAIR:AT3G22910.1,TAIR:AT3G63380.1,TAIR:AT5G57110.1,TIGRFAMs:TIGR01494,TrEMBL:B9HKB8,TrEMBL:F6HDU9,TrEMBL:F6HDV0;Derives_from=GSCOCT00025478001;Name=Cc11_g03060;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005524,GO:0006754,GO:0006812,GO:0008152,GO:0016020,CC_EC_number:3.6.3.8,PRODUCT:Calcium-transporting ATPase 12%2C plasma membrane-type,CC_functional_completeness:fragment,CC_gene:ACA12,CC_gene:ACA13,CC_gene:ACA8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025478001~ Calcium-transporting ATPase 12%2C plasma membrane-type~ ACA12~ fragment;original_location=complement(962931..964697);owner=coffea | |
| 57137 chr11 manual_curation exon 11514085 11515963 . + . Parent=GSCOCT00025478001 | |
| 57138 chr11 manual_curation CDS 11514085 11515851 . + 0 Parent=GSCOCT00025478001 | |
| 57139 chr11 manual_curation gene 11542806 11546618 . + . ID=GSCOCG00025477001;Name=Cc11_g03070 | |
| 57140 chr11 manual_curation mRNA 11542806 11546618 . + . ID=GSCOCT00025477001;Parent=GSCOCG00025477001;Name=Cc11_g03070 | |
| 57141 chr11 manual_curation polypeptide 11542806 11546618 . + . ID=GSCOCP00025477001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001005,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR014778,InterPro:IPR015495,InterPro:IPR017930,PANTHER:PTHR10641,PFAM:PF00249,PROFILE:PS51294,SMART:SM00717,SUPERFAMILY:SSF46689,SwissProt:P10243,SwissProt:P51960,SwissProt:Q9S7L2,TAIR:AT4G18770.1,TAIR:AT5G11050.1,TAIR:AT5G58850.1,TrEMBL:B9HP58,TrEMBL:B9SHZ4,TrEMBL:D7SK07;Derives_from=GSCOCT00025477001;Name=Cc11_g03070;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative Predicted protein,CC_functional_completeness:complete,CC_gene:MYB98,CC_gene:Mybl1,CC_gene:MYBL1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025477001~ Putative Predicted protein~ MYB98~ complete;original_location=complement(join(935716..935976%2C935543..935646%2C935253..935379%2C932769..933072%2C932164..932687));owner=coffea | |
| 57142 chr11 manual_curation exon 11546095 11546618 . + . Parent=GSCOCT00025477001 | |
| 57143 chr11 manual_curation exon 11545710 11546013 . + . Parent=GSCOCT00025477001 | |
| 57144 chr11 manual_curation exon 11543403 11543529 . + . Parent=GSCOCT00025477001 | |
| 57145 chr11 manual_curation exon 11543136 11543239 . + . Parent=GSCOCT00025477001 | |
| 57146 chr11 manual_curation exon 11542806 11543066 . + . Parent=GSCOCT00025477001 | |
| 57147 chr11 manual_curation CDS 11546095 11546618 . + 1 Parent=GSCOCT00025477001 | |
| 57148 chr11 manual_curation CDS 11545710 11546013 . + 0 Parent=GSCOCT00025477001 | |
| 57149 chr11 manual_curation CDS 11543403 11543529 . + 2 Parent=GSCOCT00025477001 | |
| 57150 chr11 manual_curation CDS 11543136 11543239 . + 0 Parent=GSCOCT00025477001 | |
| 57151 chr11 manual_curation CDS 11542806 11543066 . + 0 Parent=GSCOCT00025477001 | |
| 57152 chr11 manual_curation gene 11629006 11630783 . + . ID=GSCOCG00025473001;Name=Cc11_g03080 | |
| 57153 chr11 manual_curation mRNA 11629006 11630783 . + . ID=GSCOCT00025473001;Parent=GSCOCG00025473001;Name=Cc11_g03080 | |
| 57154 chr11 manual_curation polypeptide 11629188 11630783 . + . ID=GSCOCP00025473001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,SwissProt:Q494Q1,SwissProt:Q9LTH2,SwissProt:Q9LTH3,TAIR:AT3G46700.1,TAIR:AT5G59580.1,TAIR:AT5G59590.1,TrEMBL:A5BH14,TrEMBL:A9PGJ3,TrEMBL:B9S398;Derives_from=GSCOCT00025473001;Name=Cc11_g03080;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:Putative UDP-glycosyltransferase 76E1,CC_functional_completeness:complete,CC_gene:UGT76E1,CC_gene:UGT76E3,CC_gene:UGT76E2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025473001~ Putative UDP-glycosyltransferase 76E1~ UGT76E1~ complete;original_location=complement(join(849111..849594%2C847999..848969));owner=coffea | |
| 57155 chr11 manual_curation exon 11629813 11630783 . + . Parent=GSCOCT00025473001 | |
| 57156 chr11 manual_curation exon 11629006 11629671 . + . Parent=GSCOCT00025473001 | |
| 57157 chr11 manual_curation CDS 11629813 11630783 . + 1 Parent=GSCOCT00025473001 | |
| 57158 chr11 manual_curation CDS 11629188 11629671 . + 0 Parent=GSCOCT00025473001 | |
| 57159 chr11 manual_curation gene 11663917 11664780 . + . ID=GSCOCG00025471001;Name=Cc11_g03090 | |
| 57160 chr11 manual_curation mRNA 11663917 11664780 . + . ID=GSCOCT00025471001;Parent=GSCOCG00025471001;Name=Cc11_g03090 | |
| 57161 chr11 manual_curation polypeptide 11663917 11664780 . + . ID=GSCOCP00025471001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,SwissProt:Q9LTH2,SwissProt:Q9LTH3,SwissProt:Q9SNB1,TAIR:AT3G46670.1,TAIR:AT5G59580.1,TAIR:AT5G59590.1,TrEMBL:A9PGJ3,TrEMBL:B9S398,TrEMBL:B9SIX3;Derives_from=GSCOCT00025471001;Name=Cc11_g03090;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:missing_EC_number,PRODUCT:Putative UDP-glycosyltransferase 76E11,CC_functional_completeness:fragment,CC_gene:UGT76E11,CC_gene:UGT76E1,CC_gene:UGT76E2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025471001~ Putative UDP-glycosyltransferase 76E11~ UGT76E11~ fragment;original_location=complement(join(814451..814865%2C814002..814309));owner=coffea | |
| 57162 chr11 manual_curation exon 11664473 11664780 . + . Parent=GSCOCT00025471001 | |
| 57163 chr11 manual_curation exon 11663917 11664331 . + . Parent=GSCOCT00025471001 | |
| 57164 chr11 manual_curation CDS 11664473 11664780 . + 1 Parent=GSCOCT00025471001 | |
| 57165 chr11 manual_curation CDS 11663917 11664331 . + 0 Parent=GSCOCT00025471001 | |
| 57166 chr11 manual_curation gene 11713543 11715130 . + . ID=GSCOCG00025467001;Name=Cc11_g03100 | |
| 57167 chr11 manual_curation mRNA 11713543 11715130 . + . ID=GSCOCT00025467001;Parent=GSCOCG00025467001;Name=Cc11_g03100 | |
| 57168 chr11 manual_curation polypeptide 11713543 11715130 . + . ID=GSCOCP00025467001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,SwissProt:Q494Q1,SwissProt:Q9LTH2,SwissProt:Q9LTH3,TAIR:AT3G46700.1,TAIR:AT5G59580.1,TAIR:AT5G59590.1,TrEMBL:A9PGJ3,TrEMBL:B9S398,TrEMBL:I1LJW9;Derives_from=GSCOCT00025467001;Name=Cc11_g03100;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:Putative UDP-glycosyltransferase 76E3,CC_functional_completeness:complete,CC_gene:UGT76E3,CC_gene:UGT76E1,CC_gene:UGT76E2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025467001~ Putative UDP-glycosyltransferase 76E3~ UGT76E3~ complete;original_location=complement(join(765038..765239%2C764756..764974%2C763652..764622));owner=coffea | |
| 57169 chr11 manual_curation exon 11714160 11715130 . + . Parent=GSCOCT00025467001 | |
| 57170 chr11 manual_curation exon 11713808 11714026 . + . Parent=GSCOCT00025467001 | |
| 57171 chr11 manual_curation exon 11713543 11713744 . + . Parent=GSCOCT00025467001 | |
| 57172 chr11 manual_curation CDS 11714160 11715130 . + 1 Parent=GSCOCT00025467001 | |
| 57173 chr11 manual_curation CDS 11713808 11714026 . + 1 Parent=GSCOCT00025467001 | |
| 57174 chr11 manual_curation CDS 11713543 11713744 . + 0 Parent=GSCOCT00025467001 | |
| 57175 chr11 manual_curation gene 11730903 11731817 . - . ID=GSCOCG00025466001;Name=Cc11_g03110 | |
| 57176 chr11 manual_curation mRNA 11730903 11731817 . - . ID=GSCOCT00025466001;Parent=GSCOCG00025466001;Name=Cc11_g03110 | |
| 57177 chr11 manual_curation polypeptide 11730903 11731817 . - . ID=GSCOCP00025466001;Dbxref=SwissProt:Q9FXC7,TAIR:AT1G67623.1,TAIR:AT1G74875.1,TrEMBL:A5AV49,TrEMBL:B9I6Z5,TrEMBL:B9RMM6;Derives_from=GSCOCT00025466001;Name=Cc11_g03110;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative F-box protein At1g67623,CC_functional_completeness:fragment,CC_gene:At1g67623;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025466001~ Putative F-box protein At1g67623~ At1g67623~ fragment;original_location=join(746965..747089%2C747190..747352%2C747787..747879);owner=coffea | |
| 57178 chr11 manual_curation exon 11731693 11731817 . - . Parent=GSCOCT00025466001 | |
| 57179 chr11 manual_curation exon 11731430 11731592 . - . Parent=GSCOCT00025466001 | |
| 57180 chr11 manual_curation exon 11730903 11730995 . - . Parent=GSCOCT00025466001 | |
| 57181 chr11 manual_curation CDS 11731693 11731817 . - 0 Parent=GSCOCT00025466001 | |
| 57182 chr11 manual_curation CDS 11731430 11731592 . - 2 Parent=GSCOCT00025466001 | |
| 57183 chr11 manual_curation CDS 11730903 11730995 . - 0 Parent=GSCOCT00025466001 | |
| 57184 chr11 manual_curation gene 11741489 11742528 . + . ID=GSCOCG00025465001;Name=Cc11_g03120 | |
| 57185 chr11 manual_curation mRNA 11741489 11742528 . + . ID=GSCOCT00025465001;Parent=GSCOCG00025465001;Name=Cc11_g03120 | |
| 57186 chr11 manual_curation polypeptide 11741489 11742528 . + . ID=GSCOCP00025465001;Dbxref=InterPro:IPR019557,PFAM:PF10536,TrEMBL:A5C0B1;Derives_from=GSCOCT00025465001;Name=Cc11_g03120;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025465001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=complement(join(737102..737293%2C736813..736980%2C736254..736691));owner=coffea | |
| 57187 chr11 manual_curation exon 11742091 11742528 . + . Parent=GSCOCT00025465001 | |
| 57188 chr11 manual_curation exon 11741802 11741969 . + . Parent=GSCOCT00025465001 | |
| 57189 chr11 manual_curation exon 11741489 11741680 . + . Parent=GSCOCT00025465001 | |
| 57190 chr11 manual_curation CDS 11742091 11742528 . + 0 Parent=GSCOCT00025465001 | |
| 57191 chr11 manual_curation CDS 11741802 11741969 . + 0 Parent=GSCOCT00025465001 | |
| 57192 chr11 manual_curation CDS 11741489 11741680 . + 0 Parent=GSCOCT00025465001 | |
| 57193 chr11 manual_curation gene 11760154 11762195 . + . ID=GSCOCG00025463001;Name=Cc11_g03130 | |
| 57194 chr11 manual_curation mRNA 11760154 11762195 . + . ID=GSCOCT00025463001;Parent=GSCOCG00025463001;Name=Cc11_g03130 | |
| 57195 chr11 manual_curation polypeptide 11760341 11761878 . + . ID=GSCOCP00025463001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,SwissProt:Q494Q1,SwissProt:Q9LTH2,SwissProt:Q9LTH3,TAIR:AT3G46700.1,TAIR:AT5G59580.1,TAIR:AT5G59590.1,TrEMBL:A5BH14,TrEMBL:A9PGJ3,TrEMBL:B9S398;Derives_from=GSCOCT00025463001;Name=Cc11_g03130;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:Putative UDP-glycosyltransferase 76E2,CC_functional_completeness:complete,CC_gene:UGT76E2,CC_gene:UGT76E1,CC_gene:UGT76E3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025463001~ Putative UDP-glycosyltransferase 76E2~ UGT76E2~ complete;original_location=complement(join(717958..718441%2C716904..717808));owner=coffea | |
| 57196 chr11 manual_curation exon 11760974 11762195 . + . Parent=GSCOCT00025463001 | |
| 57197 chr11 manual_curation exon 11760154 11760824 . + . Parent=GSCOCT00025463001 | |
| 57198 chr11 manual_curation CDS 11760974 11761878 . + 1 Parent=GSCOCT00025463001 | |
| 57199 chr11 manual_curation CDS 11760341 11760824 . + 0 Parent=GSCOCT00025463001 | |
| 57200 chr11 manual_curation gene 11768316 11770592 . + . ID=GSCOCG00025462001;Name=Cc11_g03140 | |
| 57201 chr11 manual_curation mRNA 11768316 11770592 . + . ID=GSCOCT00025462001;Parent=GSCOCG00025462001;Name=Cc11_g03140 | |
| 57202 chr11 manual_curation polypeptide 11768669 11769913 . + . ID=GSCOCP00025462001;Dbxref=InterPro:IPR002213,PFAM:PF00201,SwissProt:Q494Q1,SwissProt:Q9LTH2,SwissProt:Q9LTH3,TAIR:AT3G46700.1,TAIR:AT5G59580.1,TAIR:AT5G59590.1,TrEMBL:A9PGJ3,TrEMBL:B9S398,TrEMBL:B9SIX3;Derives_from=GSCOCT00025462001;Name=Cc11_g03140;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:Putative UDP-glycosyltransferase 76E1,CC_functional_completeness:fragment,CC_gene:UGT76E1,CC_gene:UGT76E2,CC_gene:UGT76E3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025462001~ Putative UDP-glycosyltransferase 76E1~ UGT76E1~ fragment;original_location=complement(join(709912..710113%2C708869..709770));owner=coffea | |
| 57203 chr11 manual_curation exon 11769012 11770592 . + . Parent=GSCOCT00025462001 | |
| 57204 chr11 manual_curation exon 11768316 11768870 . + . Parent=GSCOCT00025462001 | |
| 57205 chr11 manual_curation CDS 11769012 11769913 . + 1 Parent=GSCOCT00025462001 | |
| 57206 chr11 manual_curation CDS 11768669 11768870 . + 0 Parent=GSCOCT00025462001 | |
| 57207 chr11 manual_curation gene 11788683 11814621 . + . ID=GSCOCG00025459001;Name=Cc11_g03150 | |
| 57208 chr11 manual_curation mRNA 11788683 11814621 . + . ID=GSCOCT00025459001;Parent=GSCOCG00025459001;Name=Cc11_g03150 | |
| 57209 chr11 manual_curation polypeptide 11788683 11814621 . + . ID=GSCOCP00025459001;Dbxref=InterPro:IPR007120,InterPro:IPR007121,InterPro:IPR007641,InterPro:IPR007642,InterPro:IPR007644,InterPro:IPR007645,InterPro:IPR009674,InterPro:IPR015712,PANTHER:PTHR20856,PFAM:PF00562,PFAM:PF04560,PFAM:PF04561,PFAM:PF04563,PFAM:PF04565,PFAM:PF06883,PROSITE:PS01166,SwissProt:P70700,SwissProt:Q5REE8,SwissProt:Q9H9Y6,TAIR:AT1G29940.1,TAIR:AT4G21710.1,TAIR:AT5G45140.1,TrEMBL:B9SVH7,TrEMBL:F6HVC4,TrEMBL:I1M0N3;Derives_from=GSCOCT00025459001;Name=Cc11_g03150;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003899,GO:0005634,GO:0006350,GO:0032549,CC_EC_number:missing_EC_number,PRODUCT:Putative DNA-directed RNA polymerase I subunit RPA2,CC_functional_completeness:complete,CC_gene:Polr1b,CC_gene:POLR1B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025459001~ Putative DNA-directed RNA polymerase I subunit RPA2~ Polr1b~ complete;original_location=complement(join(689853..690099%2C689686..689798%2C689476..689595%2C688441..688517%2C688219..688282%2C687950..688020%2C687604..687681%2C687467..687512%2C686756..686936%2C686615..686667%2C686337..686410%2C686040..686157%2C681381..681465%2C679292..679407%2C676840..676967%2C676631..676710%2C672983..673224%2C672749..672913%2C672442..672606%2C672287..672361%2C670450..670553%2C670301..670376%2C667998..668126%2C667787..667927%2C666876..667088%2C665225..665479%2C664161..664574));owner=coffea | |
| 57210 chr11 manual_curation exon 11814208 11814621 . + . Parent=GSCOCT00025459001 | |
| 57211 chr11 manual_curation exon 11813303 11813557 . + . Parent=GSCOCT00025459001 | |
| 57212 chr11 manual_curation exon 11811694 11811906 . + . Parent=GSCOCT00025459001 | |
| 57213 chr11 manual_curation exon 11810855 11810995 . + . Parent=GSCOCT00025459001 | |
| 57214 chr11 manual_curation exon 11810656 11810784 . + . Parent=GSCOCT00025459001 | |
| 57215 chr11 manual_curation exon 11808406 11808481 . + . Parent=GSCOCT00025459001 | |
| 57216 chr11 manual_curation exon 11808229 11808332 . + . Parent=GSCOCT00025459001 | |
| 57217 chr11 manual_curation exon 11806421 11806495 . + . Parent=GSCOCT00025459001 | |
| 57218 chr11 manual_curation exon 11806176 11806340 . + . Parent=GSCOCT00025459001 | |
| 57219 chr11 manual_curation exon 11805869 11806033 . + . Parent=GSCOCT00025459001 | |
| 57220 chr11 manual_curation exon 11805558 11805799 . + . Parent=GSCOCT00025459001 | |
| 57221 chr11 manual_curation exon 11802072 11802151 . + . Parent=GSCOCT00025459001 | |
| 57222 chr11 manual_curation exon 11801815 11801942 . + . Parent=GSCOCT00025459001 | |
| 57223 chr11 manual_curation exon 11799375 11799490 . + . Parent=GSCOCT00025459001 | |
| 57224 chr11 manual_curation exon 11797317 11797401 . + . Parent=GSCOCT00025459001 | |
| 57225 chr11 manual_curation exon 11792625 11792742 . + . Parent=GSCOCT00025459001 | |
| 57226 chr11 manual_curation exon 11792372 11792445 . + . Parent=GSCOCT00025459001 | |
| 57227 chr11 manual_curation exon 11792115 11792167 . + . Parent=GSCOCT00025459001 | |
| 57228 chr11 manual_curation exon 11791846 11792026 . + . Parent=GSCOCT00025459001 | |
| 57229 chr11 manual_curation exon 11791270 11791315 . + . Parent=GSCOCT00025459001 | |
| 57230 chr11 manual_curation exon 11791101 11791178 . + . Parent=GSCOCT00025459001 | |
| 57231 chr11 manual_curation exon 11790762 11790832 . + . Parent=GSCOCT00025459001 | |
| 57232 chr11 manual_curation exon 11790500 11790563 . + . Parent=GSCOCT00025459001 | |
| 57233 chr11 manual_curation exon 11790265 11790341 . + . Parent=GSCOCT00025459001 | |
| 57234 chr11 manual_curation exon 11789187 11789306 . + . Parent=GSCOCT00025459001 | |
| 57235 chr11 manual_curation exon 11788984 11789096 . + . Parent=GSCOCT00025459001 | |
| 57236 chr11 manual_curation exon 11788683 11788929 . + . Parent=GSCOCT00025459001 | |
| 57237 chr11 manual_curation CDS 11814208 11814621 . + 0 Parent=GSCOCT00025459001 | |
| 57238 chr11 manual_curation CDS 11813303 11813557 . + 0 Parent=GSCOCT00025459001 | |
| 57239 chr11 manual_curation CDS 11811694 11811906 . + 0 Parent=GSCOCT00025459001 | |
| 57240 chr11 manual_curation CDS 11810855 11810995 . + 0 Parent=GSCOCT00025459001 | |
| 57241 chr11 manual_curation CDS 11810656 11810784 . + 0 Parent=GSCOCT00025459001 | |
| 57242 chr11 manual_curation CDS 11808406 11808481 . + 2 Parent=GSCOCT00025459001 | |
| 57243 chr11 manual_curation CDS 11808229 11808332 . + 0 Parent=GSCOCT00025459001 | |
| 57244 chr11 manual_curation CDS 11806421 11806495 . + 0 Parent=GSCOCT00025459001 | |
| 57245 chr11 manual_curation CDS 11806176 11806340 . + 0 Parent=GSCOCT00025459001 | |
| 57246 chr11 manual_curation CDS 11805869 11806033 . + 0 Parent=GSCOCT00025459001 | |
| 57247 chr11 manual_curation CDS 11805558 11805799 . + 1 Parent=GSCOCT00025459001 | |
| 57248 chr11 manual_curation CDS 11802072 11802151 . + 2 Parent=GSCOCT00025459001 | |
| 57249 chr11 manual_curation CDS 11801815 11801942 . + 0 Parent=GSCOCT00025459001 | |
| 57250 chr11 manual_curation CDS 11799375 11799490 . + 1 Parent=GSCOCT00025459001 | |
| 57251 chr11 manual_curation CDS 11797317 11797401 . + 0 Parent=GSCOCT00025459001 | |
| 57252 chr11 manual_curation CDS 11792625 11792742 . + 2 Parent=GSCOCT00025459001 | |
| 57253 chr11 manual_curation CDS 11792372 11792445 . + 0 Parent=GSCOCT00025459001 | |
| 57254 chr11 manual_curation CDS 11792115 11792167 . + 1 Parent=GSCOCT00025459001 | |
| 57255 chr11 manual_curation CDS 11791846 11792026 . + 0 Parent=GSCOCT00025459001 | |
| 57256 chr11 manual_curation CDS 11791270 11791315 . + 2 Parent=GSCOCT00025459001 | |
| 57257 chr11 manual_curation CDS 11791101 11791178 . + 2 Parent=GSCOCT00025459001 | |
| 57258 chr11 manual_curation CDS 11790762 11790832 . + 0 Parent=GSCOCT00025459001 | |
| 57259 chr11 manual_curation CDS 11790500 11790563 . + 2 Parent=GSCOCT00025459001 | |
| 57260 chr11 manual_curation CDS 11790265 11790341 . + 0 Parent=GSCOCT00025459001 | |
| 57261 chr11 manual_curation CDS 11789187 11789306 . + 0 Parent=GSCOCT00025459001 | |
| 57262 chr11 manual_curation CDS 11788984 11789096 . + 1 Parent=GSCOCT00025459001 | |
| 57263 chr11 manual_curation CDS 11788683 11788929 . + 0 Parent=GSCOCT00025459001 | |
| 57264 chr11 manual_curation gene 11814859 11815868 . - . ID=GSCOCG00025458001;Name=Cc11_g03160 | |
| 57265 chr11 manual_curation mRNA 11814859 11815868 . - . ID=GSCOCT00025458001;Parent=GSCOCG00025458001;Name=Cc11_g03160 | |
| 57266 chr11 manual_curation polypeptide 11815443 11815868 . - . ID=GSCOCP00025458001;Dbxref=InterPro:IPR001944,PANTHER:PTHR23421,SwissProt:P48980,SwissProt:Q8W0A1,SwissProt:Q9SCW1,TAIR:AT3G13750.1,TAIR:AT4G26140.1,TAIR:AT4G36360.1,TrEMBL:B2BMP7,TrEMBL:B9SN40,TrEMBL:C3VDH9;Derives_from=GSCOCT00025458001;Name=Cc11_g03160;Ontology_term=CC_evidence_code:ISS,GO:0005975,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:BGAL1,CC_gene:Os01g0580200;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025458001~ Hypothetical protein~ BGAL1~ missing_functional_completeness;original_location=join(662914..663003%2C663091..663339);owner=coffea | |
| 57267 chr11 manual_curation exon 11815779 11815868 . - . Parent=GSCOCT00025458001 | |
| 57268 chr11 manual_curation exon 11814859 11815691 . - . Parent=GSCOCT00025458001 | |
| 57269 chr11 manual_curation CDS 11815779 11815868 . - 0 Parent=GSCOCT00025458001 | |
| 57270 chr11 manual_curation CDS 11815443 11815691 . - 0 Parent=GSCOCT00025458001 | |
| 57271 chr11 manual_curation gene 11823759 11825089 . + . ID=GSCOCG00025457001;Name=Cc11_g03170 | |
| 57272 chr11 manual_curation mRNA 11823759 11825089 . + . ID=GSCOCT00025457001;Parent=GSCOCG00025457001;Name=Cc11_g03170 | |
| 57273 chr11 manual_curation polypeptide 11823759 11825089 . + . ID=GSCOCP00025457001;Dbxref=InterPro:IPR005828,InterPro:IPR016196,PFAM:PF00083,SUPERFAMILY:SSF103473,SwissProt:O48639,SwissProt:Q494P0,SwissProt:Q96303,TAIR:AT2G38940.1,TAIR:AT3G54700.1,TAIR:AT5G43360.1,TrEMBL:A2XCK7,TrEMBL:B9FYK7,TrEMBL:F6H8P7;Derives_from=GSCOCT00025457001;Name=Cc11_g03170;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006810,GO:0016021,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Inorganic phosphate transporter 1-4,CC_functional_completeness:fragment,CC_gene:PHT1-4,CC_gene:PHT1-7,CC_gene:PHT1-3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025457001~ Inorganic phosphate transporter 1-4~ PHT1-4~ fragment;original_location=complement(join(654972..655023%2C654705..654915%2C654476..654654%2C653693..654030));owner=coffea | |
| 57274 chr11 manual_curation exon 11824752 11825089 . + . Parent=GSCOCT00025457001 | |
| 57275 chr11 manual_curation exon 11824128 11824306 . + . Parent=GSCOCT00025457001 | |
| 57276 chr11 manual_curation exon 11823867 11824077 . + . Parent=GSCOCT00025457001 | |
| 57277 chr11 manual_curation exon 11823759 11823810 . + . Parent=GSCOCT00025457001 | |
| 57278 chr11 manual_curation CDS 11824752 11825089 . + 1 Parent=GSCOCT00025457001 | |
| 57279 chr11 manual_curation CDS 11824128 11824306 . + 2 Parent=GSCOCT00025457001 | |
| 57280 chr11 manual_curation CDS 11823867 11824077 . + 1 Parent=GSCOCT00025457001 | |
| 57281 chr11 manual_curation CDS 11823759 11823810 . + 0 Parent=GSCOCT00025457001 | |
| 57282 chr11 manual_curation gene 11828810 11830117 . + . ID=GSCOCG00025455001;Name=Cc11_g03180 | |
| 57283 chr11 manual_curation mRNA 11828810 11830117 . + . ID=GSCOCT00025455001;Parent=GSCOCG00025455001;Name=Cc11_g03180 | |
| 57284 chr11 manual_curation polypeptide 11828810 11830117 . + . ID=GSCOCP00025455001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR000571,InterPro:IPR001680,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019775,InterPro:IPR019781,InterPro:IPR019782,InterPro:IPR020472,PFAM:PF00400,PRINTS:PR00320,PROFILE:PS50082,PROFILE:PS50103,PROFILE:PS50294,PROSITE:PS00678,SMART:SM00320,SMART:SM00356,SUPERFAMILY:SSF50978,SwissProt:Q0DYP5,SwissProt:Q9FNZ1,SwissProt:Q9FNZ2,TAIR:AT4G25440.1,TAIR:AT5G49200.1,TAIR:AT5G51980.2,TrEMBL:B9R9H9,TrEMBL:C6TF04,TrEMBL:I1MB97;Derives_from=GSCOCT00025455001;Name=Cc11_g03180;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0008270,CC_EC_number:2.7.11.7,PRODUCT:Putative Zinc finger CCCH domain-containing protein 48,CC_functional_completeness:complete,CC_gene:ZFWD1,CC_gene:ZFWD2,CC_gene:Os02g0677700;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025455001~ Putative Zinc finger CCCH domain-containing protein 48~ ZFWD1~ complete;original_location=complement(648665..649972);owner=coffea | |
| 57285 chr11 manual_curation exon 11828810 11830117 . + . Parent=GSCOCT00025455001 | |
| 57286 chr11 manual_curation CDS 11828810 11830117 . + 0 Parent=GSCOCT00025455001 | |
| 57287 chr11 manual_curation gene 11831106 11835591 . - . ID=GSCOCG00025453001;Name=Cc11_g03190 | |
| 57288 chr11 manual_curation mRNA 11831106 11835591 . - . ID=GSCOCT00025453001;Parent=GSCOCG00025453001;Name=Cc11_g03190 | |
| 57289 chr11 manual_curation polypeptide 11832402 11833796 . - . ID=GSCOCP00025453001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q94JX6,SwissProt:Q9FH87,SwissProt:Q9S7R4,TAIR:AT1G74900.1,TAIR:AT5G18390.1,TAIR:AT5G65820.1,TIGRFAMs:TIGR00756,TrEMBL:B9S7R3,TrEMBL:D7LXU6,TrEMBL:D7TDU0;Derives_from=GSCOCT00025453001;Name=Cc11_g03190;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At5g18390%2C mitochondrial,CC_functional_completeness:complete,CC_gene:At5g18390,CC_gene:OTP43,CC_gene:At5g65820;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025453001~ Pentatricopeptide repeat-containing protein At5g18390%2C mitochondrial~ At5g18390~ complete;original_location=644986..646380;owner=coffea | |
| 57290 chr11 manual_curation exon 11835195 11835591 . - . Parent=GSCOCT00025453001 | |
| 57291 chr11 manual_curation exon 11831106 11831473 . - . Parent=GSCOCT00025453001 | |
| 57292 chr11 manual_curation exon 11832337 11833921 . - . Parent=GSCOCT00025453001 | |
| 57293 chr11 manual_curation CDS 11832402 11833796 . - 0 Parent=GSCOCT00025453001 | |
| 57294 chr11 manual_curation gene 11848719 11853291 . - . ID=GSCOCG00025452001;Name=Cc11_g03200 | |
| 57295 chr11 manual_curation mRNA 11848719 11853291 . - . ID=GSCOCT00025452001;Parent=GSCOCG00025452001;Name=Cc11_g03200 | |
| 57296 chr11 manual_curation polypeptide 11849052 11852664 . - . ID=GSCOCP00025452001;Dbxref=InterPro:IPR000571,PROFILE:PS50103,SMART:SM00356,SwissProt:Q0J952,SwissProt:Q6K977,SwissProt:Q9ZUM0,TAIR:AT2G02160.1,TrEMBL:B9HJP7,TrEMBL:B9HVM7,TrEMBL:F6HG13;Derives_from=GSCOCT00025452001;Name=Cc11_g03200;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative Zinc finger CCCH domain-containing protein 32,CC_functional_completeness:complete,CC_gene:At2g02160,CC_gene:Os02g0831100,CC_gene:Os04g0671800;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025452001~ Putative Zinc finger CCCH domain-containing protein 32~ At2g02160~ complete;original_location=join(626118..626336%2C627518..627628%2C627793..629446%2C629471..629730);owner=coffea | |
| 57297 chr11 manual_curation exon 11852446 11853291 . - . Parent=GSCOCT00025452001 | |
| 57298 chr11 manual_curation exon 11851154 11851264 . - . Parent=GSCOCT00025452001 | |
| 57299 chr11 manual_curation exon 11849336 11850989 . - . Parent=GSCOCT00025452001 | |
| 57300 chr11 manual_curation exon 11848719 11849311 . - . Parent=GSCOCT00025452001 | |
| 57301 chr11 manual_curation CDS 11852446 11852664 . - 0 Parent=GSCOCT00025452001 | |
| 57302 chr11 manual_curation CDS 11851154 11851264 . - 0 Parent=GSCOCT00025452001 | |
| 57303 chr11 manual_curation CDS 11849336 11850989 . - 0 Parent=GSCOCT00025452001 | |
| 57304 chr11 manual_curation CDS 11849052 11849311 . - 1 Parent=GSCOCT00025452001 | |
| 57305 chr11 manual_curation gene 11860983 11862026 . - . ID=GSCOCG00025451001;Name=Cc11_g03210 | |
| 57306 chr11 manual_curation mRNA 11860983 11862026 . - . ID=GSCOCT00025451001;Parent=GSCOCG00025451001;Name=Cc11_g03210 | |
| 57307 chr11 manual_curation polypeptide 11860983 11862026 . - . ID=GSCOCP00025451001;Dbxref=InterPro:IPR001806,InterPro:IPR003577,InterPro:IPR003579,InterPro:IPR013753,InterPro:IPR020851,PFAM:PF00071,PRINTS:PR00449,PROFILE:PS51419,SMART:SM00173,SMART:SM00175,SwissProt:P29687,SwissProt:P31583,SwissProt:Q9SN68,TAIR:AT3G54840.1,TAIR:AT4G19640.1,TAIR:AT5G45130.1,TrEMBL:D2UYL5,TrEMBL:G7YLC6,TrEMBL:I1LM67;Derives_from=GSCOCT00025451001;Name=Cc11_g03210;Ontology_term=CC_evidence_code:ISS,GO:0005525,GO:0005622,GO:0007264,GO:0015031,CC_EC_number:missing_EC_number,PRODUCT:Ras-related protein Rab5,CC_functional_completeness:fragment,CC_gene:RAB5,CC_gene:RHN1,CC_gene:RABF2B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025451001~ Ras-related protein Rab5~ RAB5~ fragment;original_location=join(616756..616788%2C616994..617036%2C617149..617234%2C617662..617799);owner=coffea | |
| 57308 chr11 manual_curation exon 11861994 11862026 . - . Parent=GSCOCT00025451001 | |
| 57309 chr11 manual_curation exon 11861746 11861788 . - . Parent=GSCOCT00025451001 | |
| 57310 chr11 manual_curation exon 11861548 11861633 . - . Parent=GSCOCT00025451001 | |
| 57311 chr11 manual_curation exon 11860983 11861120 . - . Parent=GSCOCT00025451001 | |
| 57312 chr11 manual_curation CDS 11861994 11862026 . - 0 Parent=GSCOCT00025451001 | |
| 57313 chr11 manual_curation CDS 11861746 11861788 . - 0 Parent=GSCOCT00025451001 | |
| 57314 chr11 manual_curation CDS 11861548 11861633 . - 1 Parent=GSCOCT00025451001 | |
| 57315 chr11 manual_curation CDS 11860983 11861120 . - 0 Parent=GSCOCT00025451001 | |
| 57316 chr11 manual_curation gene 11870774 11875129 . - . ID=GSCOCG00025449001;Name=Cc11_g03220 | |
| 57317 chr11 manual_curation mRNA 11870774 11875129 . - . ID=GSCOCT00025449001;Parent=GSCOCG00025449001;Name=Cc11_g03220 | |
| 57318 chr11 manual_curation polypeptide 11871043 11874916 . - . ID=GSCOCP00025449001;Dbxref=InterPro:IPR002005,InterPro:IPR016664,InterPro:IPR018203,PANTHER:PTHR11787,PFAM:PF00996,PIR:PIRSF016550,PRINTS:PR00891,SwissProt:Q9QXG2,SwissProt:Q9QZD5,SwissProt:Q9V8W3,TAIR:AT3G06540.1,TrEMBL:B9NBJ9,TrEMBL:B9S6U7,TrEMBL:D7U473;Derives_from=GSCOCT00025449001;Name=Cc11_g03220;Ontology_term=CC_evidence_code:ISS,GO:0043087,CC_EC_number:missing_EC_number,PRODUCT:Putative Rab escort protein,CC_functional_completeness:complete,CC_gene:Rep,CC_gene:Chml,CC_gene:Chm;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025449001~ Putative Rab escort protein~ Rep~ complete;original_location=join(603866..604668%2C605047..605172%2C605733..605832%2C606195..606233%2C606346..606589%2C606666..606741%2C607010..607211%2C607415..607495%2C607641..607739);owner=coffea | |
| 57319 chr11 manual_curation exon 11874114 11875129 . - . Parent=GSCOCT00025449001 | |
| 57320 chr11 manual_curation exon 11873610 11873735 . - . Parent=GSCOCT00025449001 | |
| 57321 chr11 manual_curation exon 11872950 11873049 . - . Parent=GSCOCT00025449001 | |
| 57322 chr11 manual_curation exon 11872549 11872587 . - . Parent=GSCOCT00025449001 | |
| 57323 chr11 manual_curation exon 11872193 11872436 . - . Parent=GSCOCT00025449001 | |
| 57324 chr11 manual_curation exon 11872041 11872116 . - . Parent=GSCOCT00025449001 | |
| 57325 chr11 manual_curation exon 11871571 11871772 . - . Parent=GSCOCT00025449001 | |
| 57326 chr11 manual_curation exon 11871287 11871367 . - . Parent=GSCOCT00025449001 | |
| 57327 chr11 manual_curation exon 11870774 11871141 . - . Parent=GSCOCT00025449001 | |
| 57328 chr11 manual_curation CDS 11874114 11874916 . - 0 Parent=GSCOCT00025449001 | |
| 57329 chr11 manual_curation CDS 11873610 11873735 . - 2 Parent=GSCOCT00025449001 | |
| 57330 chr11 manual_curation CDS 11872950 11873049 . - 2 Parent=GSCOCT00025449001 | |
| 57331 chr11 manual_curation CDS 11872549 11872587 . - 0 Parent=GSCOCT00025449001 | |
| 57332 chr11 manual_curation CDS 11872193 11872436 . - 0 Parent=GSCOCT00025449001 | |
| 57333 chr11 manual_curation CDS 11872041 11872116 . - 1 Parent=GSCOCT00025449001 | |
| 57334 chr11 manual_curation CDS 11871571 11871772 . - 2 Parent=GSCOCT00025449001 | |
| 57335 chr11 manual_curation CDS 11871287 11871367 . - 0 Parent=GSCOCT00025449001 | |
| 57336 chr11 manual_curation CDS 11871043 11871141 . - 0 Parent=GSCOCT00025449001 | |
| 57337 chr11 manual_curation gene 11875294 11900761 . + . ID=GSCOCG00025448001;Name=Cc11_g03230 | |
| 57338 chr11 manual_curation mRNA 11875294 11900761 . + . ID=GSCOCT00025448001;Parent=GSCOCG00025448001;Name=Cc11_g03230 | |
| 57339 chr11 manual_curation polypeptide 11875474 11900603 . + . ID=GSCOCP00025448001;Dbxref=GENE3D:G3DSA:3.30.230.10,InterPro:IPR006204,InterPro:IPR006206,InterPro:IPR012369,InterPro:IPR014721,InterPro:IPR019539,InterPro:IPR020568,PFAM:PF00288,PFAM:PF10509,PIR:PIRSF036399,PRINTS:PR00959,SUPERFAMILY:SSF54211,SwissProt:A0KQH8,SwissProt:C4LB24,SwissProt:O23461,TAIR:AT3G06580.1,TAIR:AT3G42850.1,TAIR:AT4G16130.1,TrEMBL:B9SPS4,TrEMBL:D7MA79,TrEMBL:D7SU50;Derives_from=GSCOCT00025448001;Name=Cc11_g03230;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0005737,GO:0008152,GO:0016301,GO:0016310,CC_EC_number:2.7.1.6,PRODUCT:L-arabinokinase,CC_functional_completeness:complete,CC_gene:ARA1,CC_gene:galK;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025448001~ L-arabinokinase~ ARA1~ complete;original_location=complement(join(603219..603308%2C601628..601735%2C601446..601514%2C601245..601328%2C600650..600726%2C600480..600546%2C599334..599391%2C599145..599212%2C599000..599062%2C597343..597396%2C597145..597247%2C596947..597056%2C595535..595654%2C593860..593916%2C591048..591220%2C590787..590955%2C589612..589695%2C588777..588902%2C588073..588203%2C587912..587993%2C586021..586108%2C584630..584673%2C584430..584525%2C584262..584338%2C582501..582698%2C580969..581134%2C579406..579477%2C578748..578951%2C578179..578301));owner=coffea | |
| 57340 chr11 manual_curation exon 11900481 11900761 . + . Parent=GSCOCT00025448001 | |
| 57341 chr11 manual_curation exon 11899831 11900034 . + . Parent=GSCOCT00025448001 | |
| 57342 chr11 manual_curation exon 11899305 11899376 . + . Parent=GSCOCT00025448001 | |
| 57343 chr11 manual_curation exon 11897648 11897813 . + . Parent=GSCOCT00025448001 | |
| 57344 chr11 manual_curation exon 11896084 11896281 . + . Parent=GSCOCT00025448001 | |
| 57345 chr11 manual_curation exon 11894444 11894520 . + . Parent=GSCOCT00025448001 | |
| 57346 chr11 manual_curation exon 11894257 11894352 . + . Parent=GSCOCT00025448001 | |
| 57347 chr11 manual_curation exon 11894109 11894152 . + . Parent=GSCOCT00025448001 | |
| 57348 chr11 manual_curation exon 11892674 11892761 . + . Parent=GSCOCT00025448001 | |
| 57349 chr11 manual_curation exon 11890789 11890870 . + . Parent=GSCOCT00025448001 | |
| 57350 chr11 manual_curation exon 11890579 11890709 . + . Parent=GSCOCT00025448001 | |
| 57351 chr11 manual_curation exon 11889880 11890005 . + . Parent=GSCOCT00025448001 | |
| 57352 chr11 manual_curation exon 11889087 11889170 . + . Parent=GSCOCT00025448001 | |
| 57353 chr11 manual_curation exon 11887827 11887995 . + . Parent=GSCOCT00025448001 | |
| 57354 chr11 manual_curation exon 11887562 11887734 . + . Parent=GSCOCT00025448001 | |
| 57355 chr11 manual_curation exon 11884866 11884922 . + . Parent=GSCOCT00025448001 | |
| 57356 chr11 manual_curation exon 11883128 11883247 . + . Parent=GSCOCT00025448001 | |
| 57357 chr11 manual_curation exon 11881726 11881835 . + . Parent=GSCOCT00025448001 | |
| 57358 chr11 manual_curation exon 11881535 11881637 . + . Parent=GSCOCT00025448001 | |
| 57359 chr11 manual_curation exon 11881386 11881439 . + . Parent=GSCOCT00025448001 | |
| 57360 chr11 manual_curation exon 11879720 11879782 . + . Parent=GSCOCT00025448001 | |
| 57361 chr11 manual_curation exon 11879570 11879637 . + . Parent=GSCOCT00025448001 | |
| 57362 chr11 manual_curation exon 11879391 11879448 . + . Parent=GSCOCT00025448001 | |
| 57363 chr11 manual_curation exon 11878236 11878302 . + . Parent=GSCOCT00025448001 | |
| 57364 chr11 manual_curation exon 11878056 11878132 . + . Parent=GSCOCT00025448001 | |
| 57365 chr11 manual_curation exon 11877454 11877537 . + . Parent=GSCOCT00025448001 | |
| 57366 chr11 manual_curation exon 11877268 11877336 . + . Parent=GSCOCT00025448001 | |
| 57367 chr11 manual_curation exon 11877047 11877154 . + . Parent=GSCOCT00025448001 | |
| 57368 chr11 manual_curation exon 11875294 11875563 . + . Parent=GSCOCT00025448001 | |
| 57369 chr11 manual_curation CDS 11900481 11900603 . + 0 Parent=GSCOCT00025448001 | |
| 57370 chr11 manual_curation CDS 11899831 11900034 . + 0 Parent=GSCOCT00025448001 | |
| 57371 chr11 manual_curation CDS 11899305 11899376 . + 0 Parent=GSCOCT00025448001 | |
| 57372 chr11 manual_curation CDS 11897648 11897813 . + 2 Parent=GSCOCT00025448001 | |
| 57373 chr11 manual_curation CDS 11896084 11896281 . + 2 Parent=GSCOCT00025448001 | |
| 57374 chr11 manual_curation CDS 11894444 11894520 . + 0 Parent=GSCOCT00025448001 | |
| 57375 chr11 manual_curation CDS 11894257 11894352 . + 0 Parent=GSCOCT00025448001 | |
| 57376 chr11 manual_curation CDS 11894109 11894152 . + 1 Parent=GSCOCT00025448001 | |
| 57377 chr11 manual_curation CDS 11892674 11892761 . + 0 Parent=GSCOCT00025448001 | |
| 57378 chr11 manual_curation CDS 11890789 11890870 . + 2 Parent=GSCOCT00025448001 | |
| 57379 chr11 manual_curation CDS 11890579 11890709 . + 0 Parent=GSCOCT00025448001 | |
| 57380 chr11 manual_curation CDS 11889880 11890005 . + 0 Parent=GSCOCT00025448001 | |
| 57381 chr11 manual_curation CDS 11889087 11889170 . + 0 Parent=GSCOCT00025448001 | |
| 57382 chr11 manual_curation CDS 11887827 11887995 . + 2 Parent=GSCOCT00025448001 | |
| 57383 chr11 manual_curation CDS 11887562 11887734 . + 0 Parent=GSCOCT00025448001 | |
| 57384 chr11 manual_curation CDS 11884866 11884922 . + 0 Parent=GSCOCT00025448001 | |
| 57385 chr11 manual_curation CDS 11883128 11883247 . + 0 Parent=GSCOCT00025448001 | |
| 57386 chr11 manual_curation CDS 11881726 11881835 . + 1 Parent=GSCOCT00025448001 | |
| 57387 chr11 manual_curation CDS 11881535 11881637 . + 0 Parent=GSCOCT00025448001 | |
| 57388 chr11 manual_curation CDS 11881386 11881439 . + 0 Parent=GSCOCT00025448001 | |
| 57389 chr11 manual_curation CDS 11879720 11879782 . + 0 Parent=GSCOCT00025448001 | |
| 57390 chr11 manual_curation CDS 11879570 11879637 . + 1 Parent=GSCOCT00025448001 | |
| 57391 chr11 manual_curation CDS 11879391 11879448 . + 0 Parent=GSCOCT00025448001 | |
| 57392 chr11 manual_curation CDS 11878236 11878302 . + 2 Parent=GSCOCT00025448001 | |
| 57393 chr11 manual_curation CDS 11878056 11878132 . + 0 Parent=GSCOCT00025448001 | |
| 57394 chr11 manual_curation CDS 11877454 11877537 . + 0 Parent=GSCOCT00025448001 | |
| 57395 chr11 manual_curation CDS 11877268 11877336 . + 0 Parent=GSCOCT00025448001 | |
| 57396 chr11 manual_curation CDS 11877047 11877154 . + 0 Parent=GSCOCT00025448001 | |
| 57397 chr11 manual_curation CDS 11875474 11875563 . + 0 Parent=GSCOCT00025448001 | |
| 57398 chr11 manual_curation gene 11935705 11943664 . - . ID=GSCOCG00025446001;Name=Cc11_g03240 | |
| 57399 chr11 manual_curation mRNA 11935705 11943664 . - . ID=GSCOCT00025446001;Parent=GSCOCG00025446001;Name=Cc11_g03240 | |
| 57400 chr11 manual_curation polypeptide 11935976 11943445 . - . ID=GSCOCP00025446001;Dbxref=InterPro:IPR005516,PFAM:PF03763,TAIR:AT1G30320.1,TAIR:AT1G67590.1,TAIR:AT2G02170.1,TrEMBL:B9HVM6,TrEMBL:B9RY40,TrEMBL:D7TAG1;Derives_from=GSCOCT00025446001;Name=Cc11_g03240;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Remorin family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025446001~ Remorin family protein~ unknown_gene~ complete;original_location=join(535337..535381%2C535764..535917%2C536517..537131%2C539839..540334%2C540957..541042%2C542610..542806);owner=coffea | |
| 57401 chr11 manual_curation exon 11943401 11943664 . - . Parent=GSCOCT00025446001 | |
| 57402 chr11 manual_curation exon 11942865 11943018 . - . Parent=GSCOCT00025446001 | |
| 57403 chr11 manual_curation exon 11941651 11942265 . - . Parent=GSCOCT00025446001 | |
| 57404 chr11 manual_curation exon 11938448 11938943 . - . Parent=GSCOCT00025446001 | |
| 57405 chr11 manual_curation exon 11937740 11937825 . - . Parent=GSCOCT00025446001 | |
| 57406 chr11 manual_curation exon 11935705 11936172 . - . Parent=GSCOCT00025446001 | |
| 57407 chr11 manual_curation CDS 11943401 11943445 . - 0 Parent=GSCOCT00025446001 | |
| 57408 chr11 manual_curation CDS 11942865 11943018 . - 0 Parent=GSCOCT00025446001 | |
| 57409 chr11 manual_curation CDS 11941651 11942265 . - 1 Parent=GSCOCT00025446001 | |
| 57410 chr11 manual_curation CDS 11938448 11938943 . - 1 Parent=GSCOCT00025446001 | |
| 57411 chr11 manual_curation CDS 11937740 11937825 . - 2 Parent=GSCOCT00025446001 | |
| 57412 chr11 manual_curation CDS 11935976 11936172 . - 1 Parent=GSCOCT00025446001 | |
| 57413 chr11 manual_curation gene 12047255 12054736 . + . ID=GSCOCG00025444001;Name=Cc11_g03250 | |
| 57414 chr11 manual_curation mRNA 12047255 12054736 . + . ID=GSCOCT00025444001;Parent=GSCOCG00025444001;Name=Cc11_g03250 | |
| 57415 chr11 manual_curation polypeptide 12047467 12054605 . + . ID=GSCOCP00025444001;Dbxref=InterPro:IPR009457,PFAM:PF06454,TAIR:AT1G14530.1,TAIR:AT2G02180.1,TAIR:AT4G21790.1,TrEMBL:B7FJ33,TrEMBL:D7TAG0,TrEMBL:I1K3A2;Derives_from=GSCOCT00025444001;Name=Cc11_g03250;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:tobamovirus multiplication protein 3,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025444001~ tobamovirus multiplication protein 3~ unknown_gene~ complete;original_location=complement(join(431163..431315%2C430489..430579%2C430186..430238%2C429994..430086%2C429800..429871%2C428740..428812%2C428607..428652%2C426026..426089%2C425891..425944%2C425494..425571%2C424177..424269));owner=coffea | |
| 57416 chr11 manual_curation exon 12054513 12054736 . + . Parent=GSCOCT00025444001 | |
| 57417 chr11 manual_curation exon 12053211 12053288 . + . Parent=GSCOCT00025444001 | |
| 57418 chr11 manual_curation exon 12052838 12052891 . + . Parent=GSCOCT00025444001 | |
| 57419 chr11 manual_curation exon 12052693 12052756 . + . Parent=GSCOCT00025444001 | |
| 57420 chr11 manual_curation exon 12050130 12050175 . + . Parent=GSCOCT00025444001 | |
| 57421 chr11 manual_curation exon 12049970 12050042 . + . Parent=GSCOCT00025444001 | |
| 57422 chr11 manual_curation exon 12048911 12048982 . + . Parent=GSCOCT00025444001 | |
| 57423 chr11 manual_curation exon 12048696 12048788 . + . Parent=GSCOCT00025444001 | |
| 57424 chr11 manual_curation exon 12048544 12048596 . + . Parent=GSCOCT00025444001 | |
| 57425 chr11 manual_curation exon 12048203 12048293 . + . Parent=GSCOCT00025444001 | |
| 57426 chr11 manual_curation exon 12047255 12047619 . + . Parent=GSCOCT00025444001 | |
| 57427 chr11 manual_curation CDS 12054513 12054605 . + 0 Parent=GSCOCT00025444001 | |
| 57428 chr11 manual_curation CDS 12053211 12053288 . + 0 Parent=GSCOCT00025444001 | |
| 57429 chr11 manual_curation CDS 12052838 12052891 . + 0 Parent=GSCOCT00025444001 | |
| 57430 chr11 manual_curation CDS 12052693 12052756 . + 2 Parent=GSCOCT00025444001 | |
| 57431 chr11 manual_curation CDS 12050130 12050175 . + 1 Parent=GSCOCT00025444001 | |
| 57432 chr11 manual_curation CDS 12049970 12050042 . + 0 Parent=GSCOCT00025444001 | |
| 57433 chr11 manual_curation CDS 12048911 12048982 . + 0 Parent=GSCOCT00025444001 | |
| 57434 chr11 manual_curation CDS 12048696 12048788 . + 0 Parent=GSCOCT00025444001 | |
| 57435 chr11 manual_curation CDS 12048544 12048596 . + 1 Parent=GSCOCT00025444001 | |
| 57436 chr11 manual_curation CDS 12048203 12048293 . + 0 Parent=GSCOCT00025444001 | |
| 57437 chr11 manual_curation CDS 12047467 12047619 . + 0 Parent=GSCOCT00025444001 | |
| 57438 chr11 manual_curation gene 12070989 12075358 . - . ID=GSCOCG00025442001;Name=Cc11_g03260 | |
| 57439 chr11 manual_curation mRNA 12070989 12075358 . - . ID=GSCOCT00025442001;Parent=GSCOCG00025442001;Name=Cc11_g03260 | |
| 57440 chr11 manual_curation polypeptide 12070989 12075358 . - . ID=GSCOCP00025442001;Dbxref=InterPro:IPR011598,SUPERFAMILY:SSF47459,SwissProt:Q8S3D1,SwissProt:Q9FYJ6,SwissProt:Q9LT67,TAIR:AT1G31050.1,TAIR:AT3G19500.1,TAIR:AT4G29100.1,TrEMBL:A5AFW3,TrEMBL:D7TAI8,TrEMBL:I1NHJ5;Derives_from=GSCOCT00025442001;Name=Cc11_g03260;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0030528,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative basic helix-loop-helix (bHLH) DNA-binding superfamily protein,CC_functional_completeness:complete,CC_gene:BHLH111,CC_gene:BHLH68,CC_gene:BHLH113;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025442001~ Putative basic helix-loop-helix (bHLH) DNA-binding superfamily protein~ BHLH111~ complete;original_location=join(403424..403746%2C404529..405177%2C405486..405641%2C405739..405810%2C406413..406478%2C406724..406762%2C407629..407793);owner=coffea | |
| 57441 chr11 manual_curation exon 12075036 12075358 . - . Parent=GSCOCT00025442001 | |
| 57442 chr11 manual_curation exon 12073605 12074253 . - . Parent=GSCOCT00025442001 | |
| 57443 chr11 manual_curation exon 12073141 12073296 . - . Parent=GSCOCT00025442001 | |
| 57444 chr11 manual_curation exon 12072972 12073043 . - . Parent=GSCOCT00025442001 | |
| 57445 chr11 manual_curation exon 12072304 12072369 . - . Parent=GSCOCT00025442001 | |
| 57446 chr11 manual_curation exon 12072020 12072058 . - . Parent=GSCOCT00025442001 | |
| 57447 chr11 manual_curation exon 12070989 12071153 . - . Parent=GSCOCT00025442001 | |
| 57448 chr11 manual_curation CDS 12075036 12075358 . - 0 Parent=GSCOCT00025442001 | |
| 57449 chr11 manual_curation CDS 12073605 12074253 . - 2 Parent=GSCOCT00025442001 | |
| 57450 chr11 manual_curation CDS 12073141 12073296 . - 0 Parent=GSCOCT00025442001 | |
| 57451 chr11 manual_curation CDS 12072972 12073043 . - 0 Parent=GSCOCT00025442001 | |
| 57452 chr11 manual_curation CDS 12072304 12072369 . - 0 Parent=GSCOCT00025442001 | |
| 57453 chr11 manual_curation CDS 12072020 12072058 . - 0 Parent=GSCOCT00025442001 | |
| 57454 chr11 manual_curation CDS 12070989 12071153 . - 0 Parent=GSCOCT00025442001 | |
| 57455 chr11 manual_curation gene 12169291 12173258 . - . ID=GSCOCG00025441001;Name=Cc11_g03270 | |
| 57456 chr11 manual_curation mRNA 12169291 12173258 . - . ID=GSCOCT00025441001;Parent=GSCOCG00025441001;Name=Cc11_g03270 | |
| 57457 chr11 manual_curation polypeptide 12169291 12173079 . - . ID=GSCOCP00025441001;Dbxref=GENE3D:G3DSA:3.40.718.10,InterPro:IPR001804,InterPro:IPR004429,InterPro:IPR019818,PANTHER:PTHR11835,PANTHER:PTHR11835:SF13,PFAM:PF00180,PROSITE:PS00470,SwissProt:P29102,SwissProt:P93832,SwissProt:Q9SA14,TAIR:AT1G31180.1,TAIR:AT1G80560.1,TAIR:AT5G14200.1,TIGRFAMs:TIGR00169,TrEMBL:B5LAV1,TrEMBL:B9SWT3,TrEMBL:D7T043;Derives_from=GSCOCT00025441001;Name=Cc11_g03270;Ontology_term=CC_evidence_code:ISS,GO:0000287,GO:0003862,GO:0005737,GO:0009098,GO:0051287,GO:0055114,CC_EC_number:1.1.1.85,PRODUCT:3-isopropylmalate dehydrogenase 2%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:IMDH2,CC_gene:IMDH1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025441001~ 3-isopropylmalate dehydrogenase 2%2C chloroplastic~ IMDH2~ fragment;original_location=join(305703..305928%2C306082..306211%2C306300..306411%2C306569..306644%2C306733..306821%2C307517..307603%2C309148..309264%2C309378..309491);owner=coffea | |
| 57458 chr11 manual_curation exon 12172854 12173258 . - . Parent=GSCOCT00025441001 | |
| 57459 chr11 manual_curation exon 12172571 12172700 . - . Parent=GSCOCT00025441001 | |
| 57460 chr11 manual_curation exon 12172371 12172482 . - . Parent=GSCOCT00025441001 | |
| 57461 chr11 manual_curation exon 12172138 12172213 . - . Parent=GSCOCT00025441001 | |
| 57462 chr11 manual_curation exon 12171961 12172049 . - . Parent=GSCOCT00025441001 | |
| 57463 chr11 manual_curation exon 12171179 12171265 . - . Parent=GSCOCT00025441001 | |
| 57464 chr11 manual_curation exon 12169518 12169634 . - . Parent=GSCOCT00025441001 | |
| 57465 chr11 manual_curation exon 12169291 12169404 . - . Parent=GSCOCT00025441001 | |
| 57466 chr11 manual_curation CDS 12172854 12173079 . - 0 Parent=GSCOCT00025441001 | |
| 57467 chr11 manual_curation CDS 12172571 12172700 . - 1 Parent=GSCOCT00025441001 | |
| 57468 chr11 manual_curation CDS 12172371 12172482 . - 2 Parent=GSCOCT00025441001 | |
| 57469 chr11 manual_curation CDS 12172138 12172213 . - 0 Parent=GSCOCT00025441001 | |
| 57470 chr11 manual_curation CDS 12171961 12172049 . - 1 Parent=GSCOCT00025441001 | |
| 57471 chr11 manual_curation CDS 12171179 12171265 . - 0 Parent=GSCOCT00025441001 | |
| 57472 chr11 manual_curation CDS 12169518 12169634 . - 0 Parent=GSCOCT00025441001 | |
| 57473 chr11 manual_curation CDS 12169291 12169404 . - 0 Parent=GSCOCT00025441001 | |
| 57474 chr11 manual_curation gene 12198438 12206245 . - . ID=GSCOCG00025439001;Name=Cc11_g03280 | |
| 57475 chr11 manual_curation mRNA 12198438 12206245 . - . ID=GSCOCT00025439001;Parent=GSCOCG00025439001;Name=Cc11_g03280 | |
| 57476 chr11 manual_curation polypeptide 12198935 12206135 . - . ID=GSCOCP00025439001;Dbxref=InterPro:IPR001607,InterPro:IPR001841,InterPro:IPR011422,InterPro:IPR018957,PFAM:PF00097,PFAM:PF02148,PFAM:PF07576,PRODOM:PD017029,PROFILE:PS50089,PROFILE:PS50271,SMART:SM00184,SMART:SM00290,SwissProt:Q7Z569,SwissProt:Q95QN6,SwissProt:Q99MP8,TAIR:AT2G26000.2,TAIR:AT2G42160.1,TrEMBL:B9SWT2,TrEMBL:F6H2R1,TrEMBL:I1MCC9;Derives_from=GSCOCT00025439001;Name=Cc11_g03280;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative BRCA1-associated protein,CC_functional_completeness:fragment,CC_gene:BRAP,CC_gene:Brap,CC_gene:EEED8.16;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025439001~ Putative BRCA1-associated protein~ BRAP~ fragment;original_location=join(272647..272769%2C273487..273602%2C273734..273842%2C273937..274051%2C274891..274988%2C275943..276049%2C276182..276431%2C276539..276592%2C277861..278010%2C278110..278174%2C279632..279686%2C279776..279847);owner=coffea | |
| 57477 chr11 manual_curation exon 12206013 12206245 . - . Parent=GSCOCT00025439001 | |
| 57478 chr11 manual_curation exon 12205180 12205295 . - . Parent=GSCOCT00025439001 | |
| 57479 chr11 manual_curation exon 12204940 12205048 . - . Parent=GSCOCT00025439001 | |
| 57480 chr11 manual_curation exon 12204731 12204845 . - . Parent=GSCOCT00025439001 | |
| 57481 chr11 manual_curation exon 12203794 12203891 . - . Parent=GSCOCT00025439001 | |
| 57482 chr11 manual_curation exon 12202733 12202839 . - . Parent=GSCOCT00025439001 | |
| 57483 chr11 manual_curation exon 12202351 12202600 . - . Parent=GSCOCT00025439001 | |
| 57484 chr11 manual_curation exon 12202190 12202243 . - . Parent=GSCOCT00025439001 | |
| 57485 chr11 manual_curation exon 12200772 12200921 . - . Parent=GSCOCT00025439001 | |
| 57486 chr11 manual_curation exon 12200608 12200672 . - . Parent=GSCOCT00025439001 | |
| 57487 chr11 manual_curation exon 12199096 12199150 . - . Parent=GSCOCT00025439001 | |
| 57488 chr11 manual_curation exon 12198438 12199006 . - . Parent=GSCOCT00025439001 | |
| 57489 chr11 manual_curation CDS 12206013 12206135 . - 0 Parent=GSCOCT00025439001 | |
| 57490 chr11 manual_curation CDS 12205180 12205295 . - 0 Parent=GSCOCT00025439001 | |
| 57491 chr11 manual_curation CDS 12204940 12205048 . - 2 Parent=GSCOCT00025439001 | |
| 57492 chr11 manual_curation CDS 12204731 12204845 . - 0 Parent=GSCOCT00025439001 | |
| 57493 chr11 manual_curation CDS 12203794 12203891 . - 1 Parent=GSCOCT00025439001 | |
| 57494 chr11 manual_curation CDS 12202733 12202839 . - 0 Parent=GSCOCT00025439001 | |
| 57495 chr11 manual_curation CDS 12202351 12202600 . - 2 Parent=GSCOCT00025439001 | |
| 57496 chr11 manual_curation CDS 12202190 12202243 . - 0 Parent=GSCOCT00025439001 | |
| 57497 chr11 manual_curation CDS 12200772 12200921 . - 0 Parent=GSCOCT00025439001 | |
| 57498 chr11 manual_curation CDS 12200608 12200672 . - 0 Parent=GSCOCT00025439001 | |
| 57499 chr11 manual_curation CDS 12199096 12199150 . - 2 Parent=GSCOCT00025439001 | |
| 57500 chr11 manual_curation CDS 12198935 12199006 . - 0 Parent=GSCOCT00025439001 | |
| 57501 chr11 manual_curation gene 12212530 12213997 . - . ID=GSCOCG00025438001;Name=Cc11_g03290 | |
| 57502 chr11 manual_curation mRNA 12212530 12213997 . - . ID=GSCOCT00025438001;Parent=GSCOCG00025438001;Name=Cc11_g03290 | |
| 57503 chr11 manual_curation polypeptide 12212530 12213997 . - . ID=GSCOCP00025438001;Dbxref=InterPro:IPR007021,PFAM:PF04937,TAIR:AT3G17450.1,TAIR:AT3G22220.1,TAIR:AT4G15020.1,TrEMBL:A5B930,TrEMBL:A5BC22,TrEMBL:A5C5V8;Derives_from=GSCOCT00025438001;Name=Cc11_g03290;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative hAT dimerisation domain-containing protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025438001~ Putative hAT dimerisation domain-containing protein~ unknown_gene~ fragment;original_location=join(264785..265315%2C265669..265909%2C265986..266086%2C266193..266252);owner=coffea | |
| 57504 chr11 manual_curation exon 12213467 12213997 . - . Parent=GSCOCT00025438001 | |
| 57505 chr11 manual_curation exon 12212873 12213113 . - . Parent=GSCOCT00025438001 | |
| 57506 chr11 manual_curation exon 12212696 12212796 . - . Parent=GSCOCT00025438001 | |
| 57507 chr11 manual_curation exon 12212530 12212589 . - . Parent=GSCOCT00025438001 | |
| 57508 chr11 manual_curation CDS 12213467 12213997 . - 0 Parent=GSCOCT00025438001 | |
| 57509 chr11 manual_curation CDS 12212873 12213113 . - 0 Parent=GSCOCT00025438001 | |
| 57510 chr11 manual_curation CDS 12212696 12212796 . - 1 Parent=GSCOCT00025438001 | |
| 57511 chr11 manual_curation CDS 12212530 12212589 . - 0 Parent=GSCOCT00025438001 | |
| 57512 chr11 manual_curation gene 12256009 12266302 . - . ID=GSCOCG00025436001;Name=Cc11_g03300 | |
| 57513 chr11 manual_curation mRNA 12256009 12266302 . - . ID=GSCOCT00025436001;Parent=GSCOCG00025436001;Name=Cc11_g03300 | |
| 57514 chr11 manual_curation polypeptide 12256214 12266051 . - . ID=GSCOCP00025436001;Dbxref=InterPro:IPR001012,InterPro:IPR006577,InterPro:IPR009060,InterPro:IPR012336,PFAM:PF00789,PROFILE:PS50033,SMART:SM00594,SUPERFAMILY:SSF46934,SUPERFAMILY:SSF52833,SwissProt:O94888,SwissProt:Q5REY7,SwissProt:Q6P5G6,TAIR:AT1G14570.2,TAIR:AT1G59550.1,TAIR:AT4G14250.1,TrEMBL:B9HVN3,TrEMBL:B9S7A4,TrEMBL:D7TAI6;Derives_from=GSCOCT00025436001;Name=Cc11_g03300;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:UBX domain-containing protein,CC_functional_completeness:complete,CC_gene:UBXN7,CC_gene:Ubxn7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025436001~ UBX domain-containing protein~ UBXN7~ complete;original_location=join(212731..212832%2C215548..215678%2C215894..216007%2C216551..216746%2C218530..218607%2C218717..218785%2C219566..219709%2C219836..219938%2C221695..221942%2C222407..222568);owner=coffea | |
| 57515 chr11 manual_curation exon 12265950 12266302 . - . Parent=GSCOCT00025436001 | |
| 57516 chr11 manual_curation exon 12263104 12263234 . - . Parent=GSCOCT00025436001 | |
| 57517 chr11 manual_curation exon 12262775 12262888 . - . Parent=GSCOCT00025436001 | |
| 57518 chr11 manual_curation exon 12262036 12262231 . - . Parent=GSCOCT00025436001 | |
| 57519 chr11 manual_curation exon 12260175 12260252 . - . Parent=GSCOCT00025436001 | |
| 57520 chr11 manual_curation exon 12259997 12260065 . - . Parent=GSCOCT00025436001 | |
| 57521 chr11 manual_curation exon 12259073 12259216 . - . Parent=GSCOCT00025436001 | |
| 57522 chr11 manual_curation exon 12258844 12258946 . - . Parent=GSCOCT00025436001 | |
| 57523 chr11 manual_curation exon 12256840 12257087 . - . Parent=GSCOCT00025436001 | |
| 57524 chr11 manual_curation exon 12256009 12256375 . - . Parent=GSCOCT00025436001 | |
| 57525 chr11 manual_curation CDS 12265950 12266051 . - 0 Parent=GSCOCT00025436001 | |
| 57526 chr11 manual_curation CDS 12263104 12263234 . - 0 Parent=GSCOCT00025436001 | |
| 57527 chr11 manual_curation CDS 12262775 12262888 . - 2 Parent=GSCOCT00025436001 | |
| 57528 chr11 manual_curation CDS 12262036 12262231 . - 2 Parent=GSCOCT00025436001 | |
| 57529 chr11 manual_curation CDS 12260175 12260252 . - 0 Parent=GSCOCT00025436001 | |
| 57530 chr11 manual_curation CDS 12259997 12260065 . - 0 Parent=GSCOCT00025436001 | |
| 57531 chr11 manual_curation CDS 12259073 12259216 . - 0 Parent=GSCOCT00025436001 | |
| 57532 chr11 manual_curation CDS 12258844 12258946 . - 0 Parent=GSCOCT00025436001 | |
| 57533 chr11 manual_curation CDS 12256840 12257087 . - 1 Parent=GSCOCT00025436001 | |
| 57534 chr11 manual_curation CDS 12256214 12256375 . - 0 Parent=GSCOCT00025436001 | |
| 57535 chr11 manual_curation gene 12271910 12280594 . - . ID=GSCOCG00025435001;Name=Cc11_g03310 | |
| 57536 chr11 manual_curation mRNA 12271910 12280594 . - . ID=GSCOCT00025435001;Parent=GSCOCG00025435001;Name=Cc11_g03310 | |
| 57537 chr11 manual_curation polypeptide 12272285 12280370 . - . ID=GSCOCP00025435001;Dbxref=InterPro:IPR001394,InterPro:IPR018200,PFAM:PF00443,PROFILE:PS50235,PROSITE:PS00972,PROSITE:PS00973,SwissProt:B2RQC2,SwissProt:D3ZU96,SwissProt:Q9FPS4,TAIR:AT3G14400.1,TAIR:AT5G46740.1,TAIR:AT5G57990.1,TrEMBL:A5CBT2,TrEMBL:F6H2K2,TrEMBL:F6I1Y1;Derives_from=GSCOCT00025435001;Name=Cc11_g03310;Ontology_term=CC_evidence_code:ISS,GO:0004221,GO:0006511,CC_EC_number:3.1.2.15,PRODUCT:Putative Ubiquitin carboxyl-terminal hydrolase,CC_functional_completeness:complete,CC_gene:UBP23,CC_gene:Usp42;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025435001~ Putative Ubiquitin carboxyl-terminal hydrolase~ UBP23~ complete;original_location=join(198412..198756%2C199570..199684%2C200522..200632%2C200964..201136%2C201352..201678%2C202632..202757%2C204028..204756%2C205083..205725%2C205840..205930%2C206338..206497);owner=coffea | |
| 57538 chr11 manual_curation exon 12280026 12280594 . - . Parent=GSCOCT00025435001 | |
| 57539 chr11 manual_curation exon 12279098 12279212 . - . Parent=GSCOCT00025435001 | |
| 57540 chr11 manual_curation exon 12278150 12278260 . - . Parent=GSCOCT00025435001 | |
| 57541 chr11 manual_curation exon 12277646 12277818 . - . Parent=GSCOCT00025435001 | |
| 57542 chr11 manual_curation exon 12277104 12277430 . - . Parent=GSCOCT00025435001 | |
| 57543 chr11 manual_curation exon 12276025 12276150 . - . Parent=GSCOCT00025435001 | |
| 57544 chr11 manual_curation exon 12274026 12274754 . - . Parent=GSCOCT00025435001 | |
| 57545 chr11 manual_curation exon 12273057 12273699 . - . Parent=GSCOCT00025435001 | |
| 57546 chr11 manual_curation exon 12272852 12272942 . - . Parent=GSCOCT00025435001 | |
| 57547 chr11 manual_curation exon 12271910 12272444 . - . Parent=GSCOCT00025435001 | |
| 57548 chr11 manual_curation CDS 12280026 12280370 . - 0 Parent=GSCOCT00025435001 | |
| 57549 chr11 manual_curation CDS 12279098 12279212 . - 0 Parent=GSCOCT00025435001 | |
| 57550 chr11 manual_curation CDS 12278150 12278260 . - 1 Parent=GSCOCT00025435001 | |
| 57551 chr11 manual_curation CDS 12277646 12277818 . - 1 Parent=GSCOCT00025435001 | |
| 57552 chr11 manual_curation CDS 12277104 12277430 . - 0 Parent=GSCOCT00025435001 | |
| 57553 chr11 manual_curation CDS 12276025 12276150 . - 0 Parent=GSCOCT00025435001 | |
| 57554 chr11 manual_curation CDS 12274026 12274754 . - 0 Parent=GSCOCT00025435001 | |
| 57555 chr11 manual_curation CDS 12273057 12273699 . - 0 Parent=GSCOCT00025435001 | |
| 57556 chr11 manual_curation CDS 12272852 12272942 . - 1 Parent=GSCOCT00025435001 | |
| 57557 chr11 manual_curation CDS 12272285 12272444 . - 2 Parent=GSCOCT00025435001 | |
| 57558 chr11 manual_curation gene 12314625 12318948 . + . ID=GSCOCG00025431001;Name=Cc11_g03320 | |
| 57559 chr11 manual_curation mRNA 12314625 12318948 . + . ID=GSCOCT00025431001;Parent=GSCOCG00025431001;Name=Cc11_g03320 | |
| 57560 chr11 manual_curation polypeptide 12314795 12317988 . + . ID=GSCOCP00025431001;Dbxref=InterPro:IPR005069,PFAM:PF03407,SwissProt:P0C042,SwissProt:Q3E6Y3,TAIR:AT1G14590.1,TAIR:AT2G02061.1,TAIR:AT4G19970.1,TrEMBL:B9S7B3,TrEMBL:Q6DBI2,TrEMBL:Q9MA24;Derives_from=GSCOCT00025431001;Name=Cc11_g03320;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Nucleotide-diphospho-sugar transferase family protein,CC_functional_completeness:complete,CC_gene:At4g15970,CC_gene:At1g28695;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025431001~ Nucleotide-diphospho-sugar transferase family protein~ At4g15970~ complete;original_location=complement(join(163715..163987%2C162862..162885%2C162286..162651%2C160993..161474%2C160794..160881));owner=coffea | |
| 57561 chr11 manual_curation exon 12317901 12318948 . + . Parent=GSCOCT00025431001 | |
| 57562 chr11 manual_curation exon 12317308 12317789 . + . Parent=GSCOCT00025431001 | |
| 57563 chr11 manual_curation exon 12316131 12316496 . + . Parent=GSCOCT00025431001 | |
| 57564 chr11 manual_curation exon 12315897 12315920 . + . Parent=GSCOCT00025431001 | |
| 57565 chr11 manual_curation exon 12314625 12315067 . + . Parent=GSCOCT00025431001 | |
| 57566 chr11 manual_curation CDS 12317901 12317988 . + 2 Parent=GSCOCT00025431001 | |
| 57567 chr11 manual_curation CDS 12317308 12317789 . + 0 Parent=GSCOCT00025431001 | |
| 57568 chr11 manual_curation CDS 12316131 12316496 . + 0 Parent=GSCOCT00025431001 | |
| 57569 chr11 manual_curation CDS 12315897 12315920 . + 0 Parent=GSCOCT00025431001 | |
| 57570 chr11 manual_curation CDS 12314795 12315067 . + 0 Parent=GSCOCT00025431001 | |
| 57571 chr11 manual_curation gene 12351934 12352748 . - . ID=GSCOCG00025430001;Name=Cc11_g03330 | |
| 57572 chr11 manual_curation mRNA 12351934 12352748 . - . ID=GSCOCT00025430001;Parent=GSCOCG00025430001;Name=Cc11_g03330 | |
| 57573 chr11 manual_curation polypeptide 12352563 12352748 . - . ID=GSCOCP00025430001;Derives_from=GSCOCT00025430001;Name=Cc11_g03330;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025430001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=126034..126219;owner=coffea | |
| 57574 chr11 manual_curation exon 12351934 12352748 . - . Parent=GSCOCT00025430001 | |
| 57575 chr11 manual_curation CDS 12352563 12352748 . - 0 Parent=GSCOCT00025430001 | |
| 57576 chr11 manual_curation gene 12353245 12367447 . - . ID=GSCOCG00025429001;Name=Cc11_g03340 | |
| 57577 chr11 manual_curation mRNA 12353245 12367447 . - . ID=GSCOCT00025429001;Parent=GSCOCG00025429001;Name=Cc11_g03340 | |
| 57578 chr11 manual_curation polypeptide 12353775 12367447 . - . ID=GSCOCP00025429001;Dbxref=GENE3D:G3DSA:3.40.50.1440,InterPro:IPR003008,InterPro:IPR003409,PFAM:PF02493,SMART:SM00698,SUPERFAMILY:SSF52490,SwissProt:Q56YP2,SwissProt:Q6F6B5,SwissProt:Q8RY89,TAIR:AT1G21980.1,TAIR:AT1G60890.2,TAIR:AT1G75010.1,TrEMBL:B9S7B0,TrEMBL:D7KSJ6,TrEMBL:D7TAJ3;Derives_from=GSCOCT00025429001;Name=Cc11_g03340;Ontology_term=CC_evidence_code:ISS,GO:0043234,GO:0051258,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3,CC_functional_completeness:complete,CC_gene:ARC3,CC_gene:PIP5K8,CC_gene:PIP5K1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025429001~ Putative Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3~ ARC3~ complete;original_location=join(111335..111407%2C111516..111577%2C115048..115182%2C115453..115501%2C115911..116023%2C116139..116210%2C116491..116601%2C117567..117748%2C118700..118984%2C119066..119163%2C119333..119724%2C122832..122939%2C123030..123167%2C123497..123663%2C124935..125007);owner=coffea | |
| 57579 chr11 manual_curation exon 12367375 12367447 . - . Parent=GSCOCT00025429001 | |
| 57580 chr11 manual_curation exon 12367205 12367266 . - . Parent=GSCOCT00025429001 | |
| 57581 chr11 manual_curation exon 12363600 12363734 . - . Parent=GSCOCT00025429001 | |
| 57582 chr11 manual_curation exon 12363281 12363329 . - . Parent=GSCOCT00025429001 | |
| 57583 chr11 manual_curation exon 12362759 12362871 . - . Parent=GSCOCT00025429001 | |
| 57584 chr11 manual_curation exon 12362572 12362643 . - . Parent=GSCOCT00025429001 | |
| 57585 chr11 manual_curation exon 12362181 12362291 . - . Parent=GSCOCT00025429001 | |
| 57586 chr11 manual_curation exon 12361034 12361215 . - . Parent=GSCOCT00025429001 | |
| 57587 chr11 manual_curation exon 12359798 12360082 . - . Parent=GSCOCT00025429001 | |
| 57588 chr11 manual_curation exon 12359619 12359716 . - . Parent=GSCOCT00025429001 | |
| 57589 chr11 manual_curation exon 12359058 12359449 . - . Parent=GSCOCT00025429001 | |
| 57590 chr11 manual_curation exon 12355843 12355950 . - . Parent=GSCOCT00025429001 | |
| 57591 chr11 manual_curation exon 12355615 12355752 . - . Parent=GSCOCT00025429001 | |
| 57592 chr11 manual_curation exon 12355119 12355285 . - . Parent=GSCOCT00025429001 | |
| 57593 chr11 manual_curation exon 12353245 12353847 . - . Parent=GSCOCT00025429001 | |
| 57594 chr11 manual_curation CDS 12367375 12367447 . - 0 Parent=GSCOCT00025429001 | |
| 57595 chr11 manual_curation CDS 12367205 12367266 . - 1 Parent=GSCOCT00025429001 | |
| 57596 chr11 manual_curation CDS 12363600 12363734 . - 0 Parent=GSCOCT00025429001 | |
| 57597 chr11 manual_curation CDS 12363281 12363329 . - 0 Parent=GSCOCT00025429001 | |
| 57598 chr11 manual_curation CDS 12362759 12362871 . - 1 Parent=GSCOCT00025429001 | |
| 57599 chr11 manual_curation CDS 12362572 12362643 . - 0 Parent=GSCOCT00025429001 | |
| 57600 chr11 manual_curation CDS 12362181 12362291 . - 0 Parent=GSCOCT00025429001 | |
| 57601 chr11 manual_curation CDS 12361034 12361215 . - 0 Parent=GSCOCT00025429001 | |
| 57602 chr11 manual_curation CDS 12359798 12360082 . - 2 Parent=GSCOCT00025429001 | |
| 57603 chr11 manual_curation CDS 12359619 12359716 . - 2 Parent=GSCOCT00025429001 | |
| 57604 chr11 manual_curation CDS 12359058 12359449 . - 1 Parent=GSCOCT00025429001 | |
| 57605 chr11 manual_curation CDS 12355843 12355950 . - 0 Parent=GSCOCT00025429001 | |
| 57606 chr11 manual_curation CDS 12355615 12355752 . - 0 Parent=GSCOCT00025429001 | |
| 57607 chr11 manual_curation CDS 12355119 12355285 . - 0 Parent=GSCOCT00025429001 | |
| 57608 chr11 manual_curation CDS 12353775 12353847 . - 2 Parent=GSCOCT00025429001 | |
| 57609 chr11 manual_curation gene 12371384 12372276 . - . ID=GSCOCG00025428001;Name=Cc11_g03350 | |
| 57610 chr11 manual_curation mRNA 12371384 12372276 . - . ID=GSCOCT00025428001;Parent=GSCOCG00025428001;Name=Cc11_g03350 | |
| 57611 chr11 manual_curation polypeptide 12371384 12372276 . - . ID=GSCOCP00025428001;Derives_from=GSCOCT00025428001;Name=Cc11_g03350;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025428001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(106506..106583%2C106717..107099%2C107239..107398);owner=coffea | |
| 57612 chr11 manual_curation exon 12372199 12372276 . - . Parent=GSCOCT00025428001 | |
| 57613 chr11 manual_curation exon 12371683 12372065 . - . Parent=GSCOCT00025428001 | |
| 57614 chr11 manual_curation exon 12371384 12371543 . - . Parent=GSCOCT00025428001 | |
| 57615 chr11 manual_curation CDS 12372199 12372276 . - 0 Parent=GSCOCT00025428001 | |
| 57616 chr11 manual_curation CDS 12371683 12372065 . - 0 Parent=GSCOCT00025428001 | |
| 57617 chr11 manual_curation CDS 12371384 12371543 . - 2 Parent=GSCOCT00025428001 | |
| 57618 chr11 manual_curation gene 12401824 12404853 . + . ID=GSCOCG00025424001;Name=Cc11_g03360 | |
| 57619 chr11 manual_curation mRNA 12401824 12404853 . + . ID=GSCOCT00025424001;Parent=GSCOCG00025424001;Name=Cc11_g03360 | |
| 57620 chr11 manual_curation polypeptide 12401824 12404853 . + . ID=GSCOCP00025424001;Dbxref=InterPro:IPR007087,InterPro:IPR015880,InterPro:IPR022755,PFAM:PF12171,PROFILE:PS50157,PROSITE:PS00028,SMART:SM00355,SwissProt:Q700D2,SwissProt:Q9FFH3,SwissProt:Q9ZWA6,TAIR:AT2G02070.1,TAIR:AT2G02080.1,TAIR:AT5G66730.1,TrEMBL:B9S7A9,TrEMBL:F6HG26,TrEMBL:F6HG27;Derives_from=GSCOCT00025424001;Name=Cc11_g03360;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative indeterminate(ID)-domain 4,CC_functional_completeness:complete,CC_gene:MGP,CC_gene:NUC,CC_gene:JKD;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025424001~ Putative indeterminate(ID)-domain 4~ MGP~ complete;original_location=complement(join(76603..76958%2C75058..75216%2C74714..74994%2C74278..74599%2C73929..74118));owner=coffea | |
| 57621 chr11 manual_curation exon 12404664 12404853 . + . Parent=GSCOCT00025424001 | |
| 57622 chr11 manual_curation exon 12404183 12404504 . + . Parent=GSCOCT00025424001 | |
| 57623 chr11 manual_curation exon 12403788 12404068 . + . Parent=GSCOCT00025424001 | |
| 57624 chr11 manual_curation exon 12403566 12403724 . + . Parent=GSCOCT00025424001 | |
| 57625 chr11 manual_curation exon 12401824 12402179 . + . Parent=GSCOCT00025424001 | |
| 57626 chr11 manual_curation CDS 12404664 12404853 . + 2 Parent=GSCOCT00025424001 | |
| 57627 chr11 manual_curation CDS 12404183 12404504 . + 1 Parent=GSCOCT00025424001 | |
| 57628 chr11 manual_curation CDS 12403788 12404068 . + 2 Parent=GSCOCT00025424001 | |
| 57629 chr11 manual_curation CDS 12403566 12403724 . + 2 Parent=GSCOCT00025424001 | |
| 57630 chr11 manual_curation CDS 12401824 12402179 . + 0 Parent=GSCOCT00025424001 | |
| 57631 chr11 manual_curation gene 12427538 12429633 . - . ID=GSCOCG00025423001;Name=Cc11_g03370 | |
| 57632 chr11 manual_curation mRNA 12427538 12429633 . - . ID=GSCOCT00025423001;Parent=GSCOCG00025423001;Name=Cc11_g03370 | |
| 57633 chr11 manual_curation polypeptide 12427538 12429633 . - . ID=GSCOCP00025423001;Dbxref=SwissProt:Q9ZQP1,TAIR:AT2G35680.1,TAIR:AT5G56610.1,TrEMBL:B9GYM0,TrEMBL:B9SZP8,TrEMBL:D7SYZ5;Derives_from=GSCOCT00025423001;Name=Cc11_g03370;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:DSP8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025423001~ Hypothetical protein~ DSP8~ missing_functional_completeness;original_location=join(49149..49295%2C49869..50001%2C50357..50465%2C50559..50656%2C51105..51244);owner=coffea | |
| 57634 chr11 manual_curation exon 12429487 12429633 . - . Parent=GSCOCT00025423001 | |
| 57635 chr11 manual_curation exon 12428781 12428913 . - . Parent=GSCOCT00025423001 | |
| 57636 chr11 manual_curation exon 12428317 12428425 . - . Parent=GSCOCT00025423001 | |
| 57637 chr11 manual_curation exon 12428126 12428223 . - . Parent=GSCOCT00025423001 | |
| 57638 chr11 manual_curation exon 12427538 12427677 . - . Parent=GSCOCT00025423001 | |
| 57639 chr11 manual_curation CDS 12429487 12429633 . - 0 Parent=GSCOCT00025423001 | |
| 57640 chr11 manual_curation CDS 12428781 12428913 . - 0 Parent=GSCOCT00025423001 | |
| 57641 chr11 manual_curation CDS 12428317 12428425 . - 1 Parent=GSCOCT00025423001 | |
| 57642 chr11 manual_curation CDS 12428126 12428223 . - 2 Parent=GSCOCT00025423001 | |
| 57643 chr11 manual_curation CDS 12427538 12427677 . - 1 Parent=GSCOCT00025423001 | |
| 57644 chr11 manual_curation gene 12434463 12445474 . - . ID=GSCOCG00025421001;Name=Cc11_g03380 | |
| 57645 chr11 manual_curation mRNA 12434463 12445474 . - . ID=GSCOCT00025421001;Parent=GSCOCG00025421001;Name=Cc11_g03380 | |
| 57646 chr11 manual_curation polypeptide 12434857 12445353 . - . ID=GSCOCP00025421001;Dbxref=InterPro:IPR000330,InterPro:IPR001650,InterPro:IPR014001,InterPro:IPR014021,PFAM:PF00176,PFAM:PF00271,PROFILE:PS51192,PROFILE:PS51194,SMART:SM00487,SMART:SM00490,SwissProt:D3Z9Z9,SwissProt:E1B7X9,SwissProt:Q04692,TAIR:AT2G02090.1,TAIR:AT3G06400.3,TAIR:AT5G18620.2,TrEMBL:C7SI23,TrEMBL:D7TAI9,TrEMBL:I1NCZ8;Derives_from=GSCOCT00025421001;Name=Cc11_g03380;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0003677,GO:0004386,GO:0005524,CC_EC_number:missing_EC_number,PRODUCT:SNF2 domain-containing protein / helicase domain-containing protein,CC_functional_completeness:complete,CC_gene:Smarcad1,CC_gene:SMARCAD1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025421001~ SNF2 domain-containing protein / helicase domain-containing protein~ Smarcad1~ complete;original_location=join(33429..33998%2C34107..34224%2C35351..35391%2C35506..35756%2C35827..36007%2C39249..39434%2C39571..39744%2C39834..39992%2C42845..42922%2C43016..43152%2C43432..43650%2C43763..43925);owner=coffea | |
| 57647 chr11 manual_curation exon 12444784 12445474 . - . Parent=GSCOCT00025421001 | |
| 57648 chr11 manual_curation exon 12444558 12444675 . - . Parent=GSCOCT00025421001 | |
| 57649 chr11 manual_curation exon 12443391 12443431 . - . Parent=GSCOCT00025421001 | |
| 57650 chr11 manual_curation exon 12443026 12443276 . - . Parent=GSCOCT00025421001 | |
| 57651 chr11 manual_curation exon 12442775 12442955 . - . Parent=GSCOCT00025421001 | |
| 57652 chr11 manual_curation exon 12439348 12439533 . - . Parent=GSCOCT00025421001 | |
| 57653 chr11 manual_curation exon 12439038 12439211 . - . Parent=GSCOCT00025421001 | |
| 57654 chr11 manual_curation exon 12438790 12438948 . - . Parent=GSCOCT00025421001 | |
| 57655 chr11 manual_curation exon 12435860 12435937 . - . Parent=GSCOCT00025421001 | |
| 57656 chr11 manual_curation exon 12435630 12435766 . - . Parent=GSCOCT00025421001 | |
| 57657 chr11 manual_curation exon 12435132 12435350 . - . Parent=GSCOCT00025421001 | |
| 57658 chr11 manual_curation exon 12434463 12435019 . - . Parent=GSCOCT00025421001 | |
| 57659 chr11 manual_curation CDS 12444784 12445353 . - 0 Parent=GSCOCT00025421001 | |
| 57660 chr11 manual_curation CDS 12444558 12444675 . - 0 Parent=GSCOCT00025421001 | |
| 57661 chr11 manual_curation CDS 12443391 12443431 . - 1 Parent=GSCOCT00025421001 | |
| 57662 chr11 manual_curation CDS 12443026 12443276 . - 0 Parent=GSCOCT00025421001 | |
| 57663 chr11 manual_curation CDS 12442775 12442955 . - 2 Parent=GSCOCT00025421001 | |
| 57664 chr11 manual_curation CDS 12439348 12439533 . - 0 Parent=GSCOCT00025421001 | |
| 57665 chr11 manual_curation CDS 12439038 12439211 . - 0 Parent=GSCOCT00025421001 | |
| 57666 chr11 manual_curation CDS 12438790 12438948 . - 0 Parent=GSCOCT00025421001 | |
| 57667 chr11 manual_curation CDS 12435860 12435937 . - 0 Parent=GSCOCT00025421001 | |
| 57668 chr11 manual_curation CDS 12435630 12435766 . - 0 Parent=GSCOCT00025421001 | |
| 57669 chr11 manual_curation CDS 12435132 12435350 . - 2 Parent=GSCOCT00025421001 | |
| 57670 chr11 manual_curation CDS 12434857 12435019 . - 2 Parent=GSCOCT00025421001 | |
| 57671 chr11 manual_curation gene 12456127 12457760 . - . ID=GSCOCG00025420001;Name=Cc11_g03390 | |
| 57672 chr11 manual_curation mRNA 12456127 12457760 . - . ID=GSCOCT00025420001;Parent=GSCOCG00025420001;Name=Cc11_g03390 | |
| 57673 chr11 manual_curation polypeptide 12456248 12457482 . - . ID=GSCOCP00025420001;Dbxref=InterPro:IPR008030,PFAM:PF05368,SwissProt:P52577,SwissProt:P52578,SwissProt:P52579,TAIR:AT1G75280.1,TAIR:AT1G75290.1,TAIR:AT4G39230.1,TrEMBL:A9PF66,TrEMBL:B9HRL7,TrEMBL:C7BFZ4;Derives_from=GSCOCT00025420001;Name=Cc11_g03390;Ontology_term=CC_evidence_code:ISS,CC_EC_number:1.3.1.45,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:At1g75280;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025420001~ Hypothetical protein~ At1g75280~ missing_functional_completeness;original_location=join(21300..21342%2C21462..21734%2C21840..21967%2C22020..22041%2C22203..22534);owner=coffea | |
| 57674 chr11 manual_curation exon 12457440 12457760 . - . Parent=GSCOCT00025420001 | |
| 57675 chr11 manual_curation exon 12457048 12457320 . - . Parent=GSCOCT00025420001 | |
| 57676 chr11 manual_curation exon 12456815 12456942 . - . Parent=GSCOCT00025420001 | |
| 57677 chr11 manual_curation exon 12456741 12456762 . - . Parent=GSCOCT00025420001 | |
| 57678 chr11 manual_curation exon 12456127 12456579 . - . Parent=GSCOCT00025420001 | |
| 57679 chr11 manual_curation CDS 12457440 12457482 . - 0 Parent=GSCOCT00025420001 | |
| 57680 chr11 manual_curation CDS 12457048 12457320 . - 1 Parent=GSCOCT00025420001 | |
| 57681 chr11 manual_curation CDS 12456815 12456942 . - 1 Parent=GSCOCT00025420001 | |
| 57682 chr11 manual_curation CDS 12456741 12456762 . - 0 Parent=GSCOCT00025420001 | |
| 57683 chr11 manual_curation CDS 12456248 12456579 . - 1 Parent=GSCOCT00025420001 | |
| 57684 chr11 manual_curation gene 12458226 12461438 . - . ID=GSCOCG00025419001;Name=Cc11_g03400 | |
| 57685 chr11 manual_curation mRNA 12458226 12461438 . - . ID=GSCOCT00025419001;Parent=GSCOCG00025419001;Name=Cc11_g03400 | |
| 57686 chr11 manual_curation polypeptide 12458658 12461438 . - . ID=GSCOCP00025419001;Dbxref=InterPro:IPR000767,InterPro:IPR001611,InterPro:IPR002182,PFAM:PF00560,PFAM:PF00931,PRINTS:PR00364,SwissProt:P0C8S1,SwissProt:Q39214,SwissProt:Q9FJK8,TAIR:AT1G53350.1,TAIR:AT3G07040.1,TAIR:AT5G48620.1,TrEMBL:A5BE05,TrEMBL:B9MU97,TrEMBL:F6HT13;Derives_from=GSCOCT00025419001;Name=Cc11_g03400;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative Disease resistance protein RPM1,CC_functional_completeness:complete,CC_gene:RPM1,CC_gene:RPP8L4,CC_gene:RPP8L2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00025419001~ Putative Disease resistance protein RPM1~ RPM1~ complete;original_location=17344..20124;owner=coffea | |
| 57687 chr11 manual_curation exon 12458226 12461438 . - . Parent=GSCOCT00025419001 | |
| 57688 chr11 manual_curation CDS 12458658 12461438 . - 0 Parent=GSCOCT00025419001 | |
| 57689 chr11 manual_curation gene 12521624 12523712 . + . ID=GSCOCG00040778001;Name=Cc11_g03410 | |
| 57690 chr11 manual_curation mRNA 12521624 12523712 . + . ID=GSCOCT00040778001;Parent=GSCOCG00040778001;Name=Cc11_g03410 | |
| 57691 chr11 manual_curation polypeptide 12521624 12523712 . + . ID=GSCOCP00040778001;Dbxref=InterPro:IPR008507,PFAM:PF05623,TAIR:AT1G03610.1,TAIR:AT1G17830.1,TAIR:AT4G03420.1,TrEMBL:B9I673,TrEMBL:B9N2A7,TrEMBL:B9SI49;Derives_from=GSCOCT00040778001;Name=Cc11_g03410;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of unknown function (DUF789),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040778001~ Putative Protein of unknown function (DUF789)~ unknown_gene~ complete;original_location=join(5267..5529%2C5648..5819%2C5944..6029%2C6125..6216%2C7147..7355);owner=coffea | |
| 57692 chr11 manual_curation exon 12521624 12521886 . + . Parent=GSCOCT00040778001 | |
| 57693 chr11 manual_curation exon 12522005 12522176 . + . Parent=GSCOCT00040778001 | |
| 57694 chr11 manual_curation exon 12522301 12522386 . + . Parent=GSCOCT00040778001 | |
| 57695 chr11 manual_curation exon 12522482 12522573 . + . Parent=GSCOCT00040778001 | |
| 57696 chr11 manual_curation exon 12523504 12523712 . + . Parent=GSCOCT00040778001 | |
| 57697 chr11 manual_curation CDS 12521624 12521886 . + 0 Parent=GSCOCT00040778001 | |
| 57698 chr11 manual_curation CDS 12522005 12522176 . + 2 Parent=GSCOCT00040778001 | |
| 57699 chr11 manual_curation CDS 12522301 12522386 . + 0 Parent=GSCOCT00040778001 | |
| 57700 chr11 manual_curation CDS 12522482 12522573 . + 2 Parent=GSCOCT00040778001 | |
| 57701 chr11 manual_curation CDS 12523504 12523712 . + 1 Parent=GSCOCT00040778001 | |
| 57702 chr11 manual_curation gene 12597646 12599442 . + . ID=GSCOCG00040780001;Name=Cc11_g03420 | |
| 57703 chr11 manual_curation mRNA 12597646 12599442 . + . ID=GSCOCT00040780001;Parent=GSCOCG00040780001;Name=Cc11_g03420 | |
| 57704 chr11 manual_curation polypeptide 12597646 12599442 . + . ID=GSCOCP00040780001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR000490,InterPro:IPR012946,InterPro:IPR013781,InterPro:IPR017853,PFAM:PF00332,PFAM:PF07983,PROSITE:PS00587,SMART:SM00768,SUPERFAMILY:SSF51445,SwissProt:Q06915,SwissProt:Q8VYE5,SwissProt:Q9FJU9,TAIR:AT2G05790.1,TAIR:AT4G26830.1,TAIR:AT5G55180.2,TrEMBL:D7T828,TrEMBL:E7CQZ9,TrEMBL:Q9FXL4;Derives_from=GSCOCT00040780001;Name=Cc11_g03420;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0043169,CC_EC_number:3.2.1.39,PRODUCT:Putative Glucan endo-1%2C3-beta-glucosidase 13,CC_functional_completeness:complete,CC_gene:At5g56590,CC_gene:At4g29360,CC_gene:A6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040780001~ Putative Glucan endo-1%2C3-beta-glucosidase 13~ At5g56590~ complete;original_location=join(81289..82726%2C83051..83085);owner=coffea | |
| 57705 chr11 manual_curation exon 12597646 12599083 . + . Parent=GSCOCT00040780001 | |
| 57706 chr11 manual_curation exon 12599408 12599442 . + . Parent=GSCOCT00040780001 | |
| 57707 chr11 manual_curation CDS 12597646 12599083 . + 0 Parent=GSCOCT00040780001 | |
| 57708 chr11 manual_curation CDS 12599408 12599442 . + 1 Parent=GSCOCT00040780001 | |
| 57709 chr11 manual_curation gene 12622794 12624110 . + . ID=GSCOCG00040781001;Name=Cc11_g03430 | |
| 57710 chr11 manual_curation mRNA 12622794 12624110 . + . ID=GSCOCT00040781001;Parent=GSCOCG00040781001;Name=Cc11_g03430 | |
| 57711 chr11 manual_curation polypeptide 12622794 12624110 . + . ID=GSCOCP00040781001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,SwissProt:Q9LMF1,SwissProt:Q9SGA8,SwissProt:Q9SK82,TAIR:AT1G22400.1,TAIR:AT3G02100.1,TAIR:AT3G11340.1,TrEMBL:B9H0D2,TrEMBL:B9IK54,TrEMBL:F6H3Z9;Derives_from=GSCOCT00040781001;Name=Cc11_g03430;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:Putative UDP-glycosyltransferase 83A1,CC_functional_completeness:fragment,CC_gene:UGT83A1,CC_gene:UGT85A1,CC_gene:UGT85A3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040781001~ Putative UDP-glycosyltransferase 83A1~ UGT83A1~ fragment;original_location=join(106437..106539%2C106852..107753);owner=coffea | |
| 57712 chr11 manual_curation exon 12622794 12622896 . + . Parent=GSCOCT00040781001 | |
| 57713 chr11 manual_curation exon 12623209 12624110 . + . Parent=GSCOCT00040781001 | |
| 57714 chr11 manual_curation CDS 12622794 12622896 . + 0 Parent=GSCOCT00040781001 | |
| 57715 chr11 manual_curation CDS 12623209 12624110 . + 1 Parent=GSCOCT00040781001 | |
| 57716 chr11 manual_curation gene 12815842 12819691 . - . ID=GSCOCG00040783001;Name=Cc11_g03440 | |
| 57717 chr11 manual_curation mRNA 12815842 12819691 . - . ID=GSCOCT00040783001;Parent=GSCOCG00040783001;Name=Cc11_g03440 | |
| 57718 chr11 manual_curation polypeptide 12816009 12819622 . - . ID=GSCOCP00040783001;Dbxref=GENE3D:G3DSA:1.10.287.110,InterPro:IPR001623,InterPro:IPR003095,InterPro:IPR015609,PANTHER:PTHR11821,PFAM:PF00226,PRINTS:PR00625,PROFILE:PS50076,SMART:SM00271,SUPERFAMILY:SSF46565,TAIR:AT2G42750.1,TAIR:AT3G05345.1,TAIR:AT5G23240.1,TrEMBL:B9HGK8,TrEMBL:D7TEX4,TrEMBL:Q9FMX6;Derives_from=GSCOCT00040783001;Name=Cc11_g03440;Ontology_term=CC_evidence_code:ISS,GO:0006457,GO:0031072,GO:0051082,CC_EC_number:missing_EC_number,PRODUCT:DNAJ heat shock N-terminal domain-containing protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040783001~ DNAJ heat shock N-terminal domain-containing protein~ unknown_gene~ complete;original_location=complement(join(302903..303265%2C301760..302016%2C300563..300734%2C299652..300284));owner=coffea | |
| 57719 chr11 manual_curation exon 12815842 12816641 . - . Parent=GSCOCT00040783001 | |
| 57720 chr11 manual_curation exon 12816920 12817091 . - . Parent=GSCOCT00040783001 | |
| 57721 chr11 manual_curation exon 12818117 12818373 . - . Parent=GSCOCT00040783001 | |
| 57722 chr11 manual_curation exon 12819260 12819691 . - . Parent=GSCOCT00040783001 | |
| 57723 chr11 manual_curation CDS 12816009 12816641 . - 0 Parent=GSCOCT00040783001 | |
| 57724 chr11 manual_curation CDS 12816920 12817091 . - 2 Parent=GSCOCT00040783001 | |
| 57725 chr11 manual_curation CDS 12818117 12818373 . - 0 Parent=GSCOCT00040783001 | |
| 57726 chr11 manual_curation CDS 12819260 12819622 . - 0 Parent=GSCOCT00040783001 | |
| 57727 chr11 manual_curation gene 12823932 12836600 . - . ID=GSCOCG00040784001;Name=Cc11_g03450 | |
| 57728 chr11 manual_curation mRNA 12823932 12836600 . - . ID=GSCOCT00040784001;Parent=GSCOCG00040784001;Name=Cc11_g03450 | |
| 57729 chr11 manual_curation polypeptide 12824353 12836462 . - . ID=GSCOCP00040784001;Dbxref=GENE3D:G3DSA:3.40.50.261,GENE3D:G3DSA:3.40.50.720,InterPro:IPR003781,InterPro:IPR005810,InterPro:IPR005811,InterPro:IPR016040,InterPro:IPR016102,InterPro:IPR017440,PFAM:PF00549,PFAM:PF02629,PIR:PIRSF001553,PRINTS:PR01798,PROSITE:PS00399,PROSITE:PS01216,SMART:SM00881,SUPERFAMILY:SSF52210,SwissProt:P68209,SwissProt:Q1RH56,SwissProt:Q4ULQ8,SwissProt:Q6DQL1,SwissProt:Q6ZL94,SwissProt:Q8GTQ9,SwissProt:Q9AKE1,TAIR:AT3G06650.1,TAIR:AT5G08300.1,TIGRFAMs:TIGR01019,TrEMBL:C5XCE8,TrEMBL:D7M1A4;Derives_from=GSCOCT00040784001;Name=Cc11_g03450;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0003878,GO:0004775,GO:0005488,GO:0008152,CC_EC_number:6.2.1.4,CC_EC_number:6.2.1.4,PRODUCT:Succinyl-CoA ligase [ADP-forming] subunit alpha-1%2C mitochondrial,CC_functional_completeness:complete,CC_gene:SCOA,CC_gene:At5g23250,CC_gene:At5g08300,CC_gene:Os07g0577700,CC_gene:sucD;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040784001~ Succinyl-CoA ligase [ADP-forming] subunit alpha-1%2C mitochondrial~ SCOA~ complete;original_location=complement(join(319890..320105%2C319469..319678%2C316298..316468%2C315395..315518%2C314084..314145%2C310924..311005%2C307996..308132));owner=coffea | |
| 57730 chr11 manual_curation exon 12823932 12824489 . - . Parent=GSCOCT00040784001 | |
| 57731 chr11 manual_curation exon 12827281 12827362 . - . Parent=GSCOCT00040784001 | |
| 57732 chr11 manual_curation exon 12830441 12830502 . - . Parent=GSCOCT00040784001 | |
| 57733 chr11 manual_curation exon 12831752 12831875 . - . Parent=GSCOCT00040784001 | |
| 57734 chr11 manual_curation exon 12832655 12832825 . - . Parent=GSCOCT00040784001 | |
| 57735 chr11 manual_curation exon 12835826 12836035 . - . Parent=GSCOCT00040784001 | |
| 57736 chr11 manual_curation exon 12836247 12836600 . - . Parent=GSCOCT00040784001 | |
| 57737 chr11 manual_curation CDS 12824353 12824489 . - 1 Parent=GSCOCT00040784001 | |
| 57738 chr11 manual_curation CDS 12827281 12827362 . - 0 Parent=GSCOCT00040784001 | |
| 57739 chr11 manual_curation CDS 12830441 12830502 . - 1 Parent=GSCOCT00040784001 | |
| 57740 chr11 manual_curation CDS 12831752 12831875 . - 0 Parent=GSCOCT00040784001 | |
| 57741 chr11 manual_curation CDS 12832655 12832825 . - 0 Parent=GSCOCT00040784001 | |
| 57742 chr11 manual_curation CDS 12835826 12836035 . - 0 Parent=GSCOCT00040784001 | |
| 57743 chr11 manual_curation CDS 12836247 12836462 . - 0 Parent=GSCOCT00040784001 | |
| 57744 chr11 manual_curation gene 12881126 12882388 . + . ID=GSCOCG00040785001;Name=Cc11_g03460 | |
| 57745 chr11 manual_curation mRNA 12881126 12882388 . + . ID=GSCOCT00040785001;Parent=GSCOCG00040785001;Name=Cc11_g03460 | |
| 57746 chr11 manual_curation polypeptide 12881126 12882388 . + . ID=GSCOCP00040785001;Dbxref=SwissProt:O65451,TAIR:AT4G04480.1,TAIR:AT4G22030.1,TrEMBL:A5AXW5,TrEMBL:F6H7H7,TrEMBL:F6H7I0;Derives_from=GSCOCT00040785001;Name=Cc11_g03460;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Probable F-box protein At4g22030,CC_functional_completeness:fragment,CC_gene:At4g22030;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040785001~ Probable F-box protein At4g22030~ At4g22030~ fragment;original_location=364769..366031;owner=coffea | |
| 57747 chr11 manual_curation exon 12881126 12882388 . + . Parent=GSCOCT00040785001 | |
| 57748 chr11 manual_curation CDS 12881126 12882388 . + 0 Parent=GSCOCT00040785001 | |
| 57749 chr11 manual_curation gene 12947727 12950240 . - . ID=GSCOCG00040790001;Name=Cc11_g03470 | |
| 57750 chr11 manual_curation mRNA 12947727 12950240 . - . ID=GSCOCT00040790001;Parent=GSCOCG00040790001;Name=Cc11_g03470 | |
| 57751 chr11 manual_curation polypeptide 12947942 12948535 . - . ID=GSCOCP00040790001;Dbxref=InterPro:IPR007269,PFAM:PF04140,SwissProt:Q7XSR9,SwissProt:Q93W54,SwissProt:Q9FMW9,TAIR:AT5G08335.1,TAIR:AT5G23320.1,TrEMBL:B9T024,TrEMBL:B9T7U4,TrEMBL:D7TR53;Derives_from=GSCOCT00040790001;Name=Cc11_g03470;Ontology_term=CC_evidence_code:ISS,GO:0004671,GO:0006481,GO:0016021,CC_EC_number:2.1.1.100,PRODUCT:Protein-S-isoprenylcysteine O-methyltransferase B,CC_functional_completeness:complete,CC_gene:ICMTB,CC_gene:ICMTA,CC_gene:ICMT;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040790001~ Protein-S-isoprenylcysteine O-methyltransferase B~ ICMTB~ complete;original_location=complement(431585..432178);owner=coffea | |
| 57752 chr11 manual_curation exon 12949992 12950240 . - . Parent=GSCOCT00040790001 | |
| 57753 chr11 manual_curation exon 12947727 12948731 . - . Parent=GSCOCT00040790001 | |
| 57754 chr11 manual_curation CDS 12947942 12948535 . - 0 Parent=GSCOCT00040790001 | |
| 57755 chr11 manual_curation gene 13103592 13105046 . - . ID=GSCOCG00040791001;Name=Cc11_g03480 | |
| 57756 chr11 manual_curation mRNA 13103592 13105046 . - . ID=GSCOCT00040791001;Parent=GSCOCG00040791001;Name=Cc11_g03480 | |
| 57757 chr11 manual_curation polypeptide 13103592 13105046 . - . ID=GSCOCP00040791001;Dbxref=InterPro:IPR004314,PFAM:PF03080,TAIR:AT1G55360.1,TAIR:AT3G13510.1,TAIR:AT5G56530.1,TrEMBL:B9T0D6,TrEMBL:G7L8S2,TrEMBL:I1GLX0;Derives_from=GSCOCT00040791001;Name=Cc11_g03480;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of Unknown Function (DUF239),CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040791001~ Putative Protein of Unknown Function (DUF239)~ unknown_gene~ fragment;original_location=complement(join(588669..588689%2C588508..588597%2C588266..588385%2C588076..588213%2C587806..587869%2C587416..587471%2C587235..587291));owner=coffea | |
| 57758 chr11 manual_curation exon 13103592 13103648 . - . Parent=GSCOCT00040791001 | |
| 57759 chr11 manual_curation exon 13103773 13103828 . - . Parent=GSCOCT00040791001 | |
| 57760 chr11 manual_curation exon 13104163 13104226 . - . Parent=GSCOCT00040791001 | |
| 57761 chr11 manual_curation exon 13104433 13104570 . - . Parent=GSCOCT00040791001 | |
| 57762 chr11 manual_curation exon 13104623 13104742 . - . Parent=GSCOCT00040791001 | |
| 57763 chr11 manual_curation exon 13104865 13104954 . - . Parent=GSCOCT00040791001 | |
| 57764 chr11 manual_curation exon 13105026 13105046 . - . Parent=GSCOCT00040791001 | |
| 57765 chr11 manual_curation CDS 13103592 13103648 . - 0 Parent=GSCOCT00040791001 | |
| 57766 chr11 manual_curation CDS 13103773 13103828 . - 1 Parent=GSCOCT00040791001 | |
| 57767 chr11 manual_curation CDS 13104163 13104226 . - 0 Parent=GSCOCT00040791001 | |
| 57768 chr11 manual_curation CDS 13104433 13104570 . - 0 Parent=GSCOCT00040791001 | |
| 57769 chr11 manual_curation CDS 13104623 13104742 . - 0 Parent=GSCOCT00040791001 | |
| 57770 chr11 manual_curation CDS 13104865 13104954 . - 0 Parent=GSCOCT00040791001 | |
| 57771 chr11 manual_curation CDS 13105026 13105046 . - 0 Parent=GSCOCT00040791001 | |
| 57772 chr11 manual_curation gene 13188716 13189267 . - . ID=GSCOCG00040792001;Name=Cc11_g03490 | |
| 57773 chr11 manual_curation mRNA 13188716 13189267 . - . ID=GSCOCT00040792001;Parent=GSCOCG00040792001;Name=Cc11_g03490 | |
| 57774 chr11 manual_curation polypeptide 13188716 13189267 . - . ID=GSCOCP00040792001;Dbxref=InterPro:IPR004265,PFAM:PF03018,SwissProt:P13240,TAIR:AT1G65870.1,TAIR:AT2G21100.1,TAIR:AT5G42510.1,TrEMBL:A5BDJ0,TrEMBL:F6HLF6,TrEMBL:Q0WYB7;Derives_from=GSCOCT00040792001;Name=Cc11_g03490;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Disease resistance-responsive (dirigent-like protein) family protein,CC_functional_completeness:complete,CC_gene:PI206;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040792001~ Disease resistance-responsive (dirigent-like protein) family protein~ PI206~ complete;original_location=complement(672359..672910);owner=coffea | |
| 57775 chr11 manual_curation exon 13188716 13189267 . - . Parent=GSCOCT00040792001 | |
| 57776 chr11 manual_curation CDS 13188716 13189267 . - 0 Parent=GSCOCT00040792001 | |
| 57777 chr11 manual_curation gene 13325923 13330248 . + . ID=GSCOCG00040795001;Name=Cc11_g03500 | |
| 57778 chr11 manual_curation mRNA 13325923 13330248 . + . ID=GSCOCT00040795001;Parent=GSCOCG00040795001;Name=Cc11_g03500 | |
| 57779 chr11 manual_curation polypeptide 13326455 13330084 . + . ID=GSCOCP00040795001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,PROSITE:PS00375,SwissProt:Q9LMF1,SwissProt:Q9SK82,SwissProt:Q9ZWJ3,TAIR:AT1G22360.1,TAIR:AT1G22380.1,TAIR:AT1G22400.1,TrEMBL:F6HNN8,TrEMBL:F6HNP6,TrEMBL:F6HNQ1;Derives_from=GSCOCT00040795001;Name=Cc11_g03500;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:Putative UDP-glycosyltransferase 85A2,CC_functional_completeness:fragment,CC_gene:UGT85A2,CC_gene:UGT85A3,CC_gene:UGT85A1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040795001~ Putative UDP-glycosyltransferase 85A2~ UGT85A2~ fragment;original_location=join(810098..810200%2C812739..813662%2C813717..813727);owner=coffea | |
| 57780 chr11 manual_curation exon 13325923 13326557 . + . Parent=GSCOCT00040795001 | |
| 57781 chr11 manual_curation exon 13329096 13330019 . + . Parent=GSCOCT00040795001 | |
| 57782 chr11 manual_curation exon 13330074 13330248 . + . Parent=GSCOCT00040795001 | |
| 57783 chr11 manual_curation CDS 13326455 13326557 . + 0 Parent=GSCOCT00040795001 | |
| 57784 chr11 manual_curation CDS 13329096 13330019 . + 1 Parent=GSCOCT00040795001 | |
| 57785 chr11 manual_curation CDS 13330074 13330084 . + 1 Parent=GSCOCT00040795001 | |
| 57786 chr11 manual_curation gene 13354230 13361159 . - . ID=GSCOCG00040796001;Name=Cc11_g03510 | |
| 57787 chr11 manual_curation mRNA 13354230 13361159 . - . ID=GSCOCT00040796001;Parent=GSCOCG00040796001;Name=Cc11_g03510 | |
| 57788 chr11 manual_curation polypeptide 13354493 13360837 . - . ID=GSCOCP00040796001;Dbxref=InterPro:IPR001841,InterPro:IPR018957,PFAM:PF00097,PROFILE:PS50089,SMART:SM00184,SwissProt:Q8L649,SwissProt:Q9H0F5,SwissProt:Q9LT17,TAIR:AT3G19910.1,TAIR:AT3G47180.1,TAIR:AT3G63530.1,TrEMBL:D7TEV5,TrEMBL:I1LF79,TrEMBL:I1NF64;Derives_from=GSCOCT00040796001;Name=Cc11_g03510;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:E3 ubiquitin ligase BIG BROTHER-related,CC_functional_completeness:fragment,CC_gene:BBR,CC_gene:BB,CC_gene:RNF38;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040796001~ E3 ubiquitin ligase BIG BROTHER-related~ BBR~ fragment;original_location=complement(join(844283..844480%2C842870..843209%2C842721..842770%2C839705..839746%2C839456..839577%2C838912..839020%2C838136..838183));owner=coffea | |
| 57789 chr11 manual_curation exon 13354230 13354540 . - . Parent=GSCOCT00040796001 | |
| 57790 chr11 manual_curation exon 13355269 13355377 . - . Parent=GSCOCT00040796001 | |
| 57791 chr11 manual_curation exon 13355813 13355934 . - . Parent=GSCOCT00040796001 | |
| 57792 chr11 manual_curation exon 13356062 13356103 . - . Parent=GSCOCT00040796001 | |
| 57793 chr11 manual_curation exon 13359078 13359127 . - . Parent=GSCOCT00040796001 | |
| 57794 chr11 manual_curation exon 13359227 13359566 . - . Parent=GSCOCT00040796001 | |
| 57795 chr11 manual_curation exon 13360640 13361159 . - . Parent=GSCOCT00040796001 | |
| 57796 chr11 manual_curation CDS 13354493 13354540 . - 0 Parent=GSCOCT00040796001 | |
| 57797 chr11 manual_curation CDS 13355269 13355377 . - 2 Parent=GSCOCT00040796001 | |
| 57798 chr11 manual_curation CDS 13355813 13355934 . - 0 Parent=GSCOCT00040796001 | |
| 57799 chr11 manual_curation CDS 13356062 13356103 . - 0 Parent=GSCOCT00040796001 | |
| 57800 chr11 manual_curation CDS 13359078 13359127 . - 1 Parent=GSCOCT00040796001 | |
| 57801 chr11 manual_curation CDS 13359227 13359566 . - 0 Parent=GSCOCT00040796001 | |
| 57802 chr11 manual_curation CDS 13360640 13360837 . - 0 Parent=GSCOCT00040796001 | |
| 57803 chr11 manual_curation gene 14061188 14067584 . - . ID=GSCOCG00040803001;Name=Cc11_g03520 | |
| 57804 chr11 manual_curation mRNA 14061188 14067584 . - . ID=GSCOCT00040803001;Parent=GSCOCG00040803001;Name=Cc11_g03520 | |
| 57805 chr11 manual_curation polypeptide 14061188 14067506 . - . ID=GSCOCP00040803001;Dbxref=InterPro:IPR001254,InterPro:IPR001940,InterPro:IPR009003,PFAM:PF00089,PRINTS:PR00834,SUPERFAMILY:SSF50494,SwissProt:O22609,SwissProt:Q9LU10,SwissProt:Q9SEL7,TAIR:AT3G27925.1,TAIR:AT4G18370.1,TAIR:AT5G39830.1,TrEMBL:B9HYW4,TrEMBL:B9S0Y6,TrEMBL:G7IP65;Derives_from=GSCOCT00040803001;Name=Cc11_g03520;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004252,GO:0006508,CC_EC_number:missing_EC_number,PRODUCT:Putative Protease Do-like 1%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:DEGP5,CC_gene:DEGP1,CC_gene:DEGP8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00040803001~ Putative Protease Do-like 1%2C chloroplastic~ DEGP5~ fragment;original_location=complement(join(1550904..1551149%2C1550084..1550230%2C1549426..1549488%2C1549204..1549293%2C1547157..1547279%2C1546933..1547020%2C1545846..1545920%2C1544831..1544937));owner=coffea | |
| 57806 chr11 manual_curation exon 14061188 14061294 . - . Parent=GSCOCT00040803001 | |
| 57807 chr11 manual_curation exon 14062203 14062277 . - . Parent=GSCOCT00040803001 | |
| 57808 chr11 manual_curation exon 14063290 14063377 . - . Parent=GSCOCT00040803001 | |
| 57809 chr11 manual_curation exon 14063514 14063636 . - . Parent=GSCOCT00040803001 | |
| 57810 chr11 manual_curation exon 14065561 14065650 . - . Parent=GSCOCT00040803001 | |
| 57811 chr11 manual_curation exon 14065783 14065845 . - . Parent=GSCOCT00040803001 | |
| 57812 chr11 manual_curation exon 14066441 14066587 . - . Parent=GSCOCT00040803001 | |
| 57813 chr11 manual_curation exon 14067261 14067584 . - . Parent=GSCOCT00040803001 | |
| 57814 chr11 manual_curation CDS 14061188 14061294 . - 1 Parent=GSCOCT00040803001 | |
| 57815 chr11 manual_curation CDS 14062203 14062277 . - 1 Parent=GSCOCT00040803001 | |
| 57816 chr11 manual_curation CDS 14063290 14063377 . - 0 Parent=GSCOCT00040803001 | |
| 57817 chr11 manual_curation CDS 14063514 14063636 . - 0 Parent=GSCOCT00040803001 | |
| 57818 chr11 manual_curation CDS 14065561 14065650 . - 0 Parent=GSCOCT00040803001 | |
| 57819 chr11 manual_curation CDS 14065783 14065845 . - 0 Parent=GSCOCT00040803001 | |
| 57820 chr11 manual_curation CDS 14066441 14066587 . - 0 Parent=GSCOCT00040803001 | |
| 57821 chr11 manual_curation CDS 14067261 14067506 . - 0 Parent=GSCOCT00040803001 | |
| 57822 chr11 manual_curation gene 14322384 14333577 . - . ID=GSCOCG00006458001;Name=Cc11_g03530 | |
| 57823 chr11 manual_curation mRNA 14322384 14333577 . - . ID=GSCOCT00006458001;Parent=GSCOCG00006458001;Name=Cc11_g03530 | |
| 57824 chr11 manual_curation polypeptide 14322635 14323862 . - . ID=GSCOCP00006458001;Dbxref=InterPro:IPR003453,PFAM:PF02405,SwissProt:P51393,SwissProt:P73009,SwissProt:Q8L4R0,TAIR:AT1G19800.2,TIGRFAMs:TIGR00056,TrEMBL:B9RPC2,TrEMBL:F6I493,TrEMBL:I1NI83;Derives_from=GSCOCT00006458001;Name=Cc11_g03530;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein TRIGALACTOSYLDIACYLGLYCEROL 1%2C chloroplastic,CC_functional_completeness:modules,CC_gene:TGD1,CC_gene:slr1045,CC_gene:ycf63;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00006458001~ Protein TRIGALACTOSYLDIACYLGLYCEROL 1%2C chloroplastic~ TGD1~ modules;original_location=complement(join(208966..209081%2C207854..208871));owner=coffea | |
| 57825 chr11 manual_curation exon 14331107 14331262 . - . Parent=GSCOCT00006458001 | |
| 57826 chr11 manual_curation exon 14333397 14333577 . - . Parent=GSCOCT00006458001 | |
| 57827 chr11 manual_curation exon 14322384 14323652 . - . Parent=GSCOCT00006458001 | |
| 57828 chr11 manual_curation exon 14323747 14323899 . - . Parent=GSCOCT00006458001 | |
| 57829 chr11 manual_curation CDS 14322635 14323652 . - 2 Parent=GSCOCT00006458001 | |
| 57830 chr11 manual_curation CDS 14323747 14323862 . - 0 Parent=GSCOCT00006458001 | |
| 57831 chr11 manual_curation gene 14355740 14361970 . + . ID=GSCOCG00006459001;Name=Cc11_g03540 | |
| 57832 chr11 manual_curation mRNA 14355740 14361970 . + . ID=GSCOCT00006459001;Parent=GSCOCG00006459001;Name=Cc11_g03540 | |
| 57833 chr11 manual_curation polypeptide 14355838 14361703 . + . ID=GSCOCP00006459001;Dbxref=GENE3D:G3DSA:3.40.850.10,InterPro:IPR001752,InterPro:IPR019821,PFAM:PF00225,PRINTS:PR00380,PROFILE:PS50067,PROSITE:PS00411,SMART:SM00129,SwissProt:O35231,SwissProt:O81635,SwissProt:Q9BVG8,TAIR:AT1G72250.2,TAIR:AT2G22610.1,TAIR:AT5G27550.1,TrEMBL:B9RF59,TrEMBL:F6HYZ5,TrEMBL:G7I841;Derives_from=GSCOCT00006459001;Name=Cc11_g03540;Ontology_term=CC_evidence_code:ISS,GO:0003777,GO:0005524,GO:0007018,CC_EC_number:missing_EC_number,PRODUCT:P-loop containing nucleoside triphosphate hydrolases superfamily protein,CC_functional_completeness:complete,CC_gene:ATK4,CC_gene:KIFC3,CC_gene:Kifc3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00006459001~ P-loop containing nucleoside triphosphate hydrolases superfamily protein~ ATK4~ complete;original_location=join(241057..241063%2C241155..241244%2C241825..241979%2C242082..242181%2C242299..242595%2C242708..242987%2C244688..244849%2C245022..245261%2C245368..245405%2C245652..245815%2C245899..246012%2C246173..246922);owner=coffea | |
| 57834 chr11 manual_curation exon 14355740 14355844 . + . Parent=GSCOCT00006459001 | |
| 57835 chr11 manual_curation exon 14355936 14356025 . + . Parent=GSCOCT00006459001 | |
| 57836 chr11 manual_curation exon 14356606 14356760 . + . Parent=GSCOCT00006459001 | |
| 57837 chr11 manual_curation exon 14356863 14356962 . + . Parent=GSCOCT00006459001 | |
| 57838 chr11 manual_curation exon 14357080 14357376 . + . Parent=GSCOCT00006459001 | |
| 57839 chr11 manual_curation exon 14357489 14357768 . + . Parent=GSCOCT00006459001 | |
| 57840 chr11 manual_curation exon 14359469 14359630 . + . Parent=GSCOCT00006459001 | |
| 57841 chr11 manual_curation exon 14359803 14360042 . + . Parent=GSCOCT00006459001 | |
| 57842 chr11 manual_curation exon 14360149 14360186 . + . Parent=GSCOCT00006459001 | |
| 57843 chr11 manual_curation exon 14360433 14360596 . + . Parent=GSCOCT00006459001 | |
| 57844 chr11 manual_curation exon 14360680 14360793 . + . Parent=GSCOCT00006459001 | |
| 57845 chr11 manual_curation exon 14360954 14361970 . + . Parent=GSCOCT00006459001 | |
| 57846 chr11 manual_curation CDS 14355838 14355844 . + 0 Parent=GSCOCT00006459001 | |
| 57847 chr11 manual_curation CDS 14355936 14356025 . + 1 Parent=GSCOCT00006459001 | |
| 57848 chr11 manual_curation CDS 14356606 14356760 . + 1 Parent=GSCOCT00006459001 | |
| 57849 chr11 manual_curation CDS 14356863 14356962 . + 0 Parent=GSCOCT00006459001 | |
| 57850 chr11 manual_curation CDS 14357080 14357376 . + 1 Parent=GSCOCT00006459001 | |
| 57851 chr11 manual_curation CDS 14357489 14357768 . + 1 Parent=GSCOCT00006459001 | |
| 57852 chr11 manual_curation CDS 14359469 14359630 . + 2 Parent=GSCOCT00006459001 | |
| 57853 chr11 manual_curation CDS 14359803 14360042 . + 2 Parent=GSCOCT00006459001 | |
| 57854 chr11 manual_curation CDS 14360149 14360186 . + 2 Parent=GSCOCT00006459001 | |
| 57855 chr11 manual_curation CDS 14360433 14360596 . + 1 Parent=GSCOCT00006459001 | |
| 57856 chr11 manual_curation CDS 14360680 14360793 . + 0 Parent=GSCOCT00006459001 | |
| 57857 chr11 manual_curation CDS 14360954 14361703 . + 0 Parent=GSCOCT00006459001 | |
| 57858 chr11 manual_curation gene 14363335 14372067 . + . ID=GSCOCG00006460001;Name=Cc11_g03550 | |
| 57859 chr11 manual_curation mRNA 14363335 14372067 . + . ID=GSCOCT00006460001;Parent=GSCOCG00006460001;Name=Cc11_g03550 | |
| 57860 chr11 manual_curation polypeptide 14363335 14371444 . + . ID=GSCOCP00006460001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:O22040,SwissProt:O22042,SwissProt:Q9FZ36,TAIR:AT1G09000.1,TAIR:AT1G54960.1,TAIR:AT3G06030.1,TrEMBL:B9RF57,TrEMBL:D7T6T7,TrEMBL:F6HYZ2;Derives_from=GSCOCT00006460001;Name=Cc11_g03550;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Mitogen-activated protein kinase kinase kinase ANP1,CC_functional_completeness:complete,CC_gene:ANP1,CC_gene:ANP2,CC_gene:ANP3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00006460001~ Mitogen-activated protein kinase kinase kinase ANP1~ ANP1~ complete;original_location=join(248554..248868%2C248996..249037%2C251194..251259%2C251342..251452%2C251530..251610%2C251691..251768%2C251883..251965%2C253114..253195%2C253312..253415%2C253758..253797%2C253881..253940%2C254032..254078%2C254168..254363%2C254455..254691%2C254800..255122%2C255220..255281%2C256560..256663);owner=coffea | |
| 57861 chr11 manual_curation exon 14363335 14363649 . + . Parent=GSCOCT00006460001 | |
| 57862 chr11 manual_curation exon 14363777 14363818 . + . Parent=GSCOCT00006460001 | |
| 57863 chr11 manual_curation exon 14365975 14366040 . + . Parent=GSCOCT00006460001 | |
| 57864 chr11 manual_curation exon 14366123 14366233 . + . Parent=GSCOCT00006460001 | |
| 57865 chr11 manual_curation exon 14366311 14366391 . + . Parent=GSCOCT00006460001 | |
| 57866 chr11 manual_curation exon 14366472 14366549 . + . Parent=GSCOCT00006460001 | |
| 57867 chr11 manual_curation exon 14366664 14366746 . + . Parent=GSCOCT00006460001 | |
| 57868 chr11 manual_curation exon 14367895 14367976 . + . Parent=GSCOCT00006460001 | |
| 57869 chr11 manual_curation exon 14368093 14368196 . + . Parent=GSCOCT00006460001 | |
| 57870 chr11 manual_curation exon 14368539 14368578 . + . Parent=GSCOCT00006460001 | |
| 57871 chr11 manual_curation exon 14368662 14368721 . + . Parent=GSCOCT00006460001 | |
| 57872 chr11 manual_curation exon 14368813 14368859 . + . Parent=GSCOCT00006460001 | |
| 57873 chr11 manual_curation exon 14368949 14369144 . + . Parent=GSCOCT00006460001 | |
| 57874 chr11 manual_curation exon 14369236 14369472 . + . Parent=GSCOCT00006460001 | |
| 57875 chr11 manual_curation exon 14369581 14369903 . + . Parent=GSCOCT00006460001 | |
| 57876 chr11 manual_curation exon 14370001 14370062 . + . Parent=GSCOCT00006460001 | |
| 57877 chr11 manual_curation exon 14371341 14372067 . + . Parent=GSCOCT00006460001 | |
| 57878 chr11 manual_curation CDS 14363335 14363649 . + 0 Parent=GSCOCT00006460001 | |
| 57879 chr11 manual_curation CDS 14363777 14363818 . + 0 Parent=GSCOCT00006460001 | |
| 57880 chr11 manual_curation CDS 14365975 14366040 . + 0 Parent=GSCOCT00006460001 | |
| 57881 chr11 manual_curation CDS 14366123 14366233 . + 0 Parent=GSCOCT00006460001 | |
| 57882 chr11 manual_curation CDS 14366311 14366391 . + 0 Parent=GSCOCT00006460001 | |
| 57883 chr11 manual_curation CDS 14366472 14366549 . + 0 Parent=GSCOCT00006460001 | |
| 57884 chr11 manual_curation CDS 14366664 14366746 . + 0 Parent=GSCOCT00006460001 | |
| 57885 chr11 manual_curation CDS 14367895 14367976 . + 2 Parent=GSCOCT00006460001 | |
| 57886 chr11 manual_curation CDS 14368093 14368196 . + 0 Parent=GSCOCT00006460001 | |
| 57887 chr11 manual_curation CDS 14368539 14368578 . + 2 Parent=GSCOCT00006460001 | |
| 57888 chr11 manual_curation CDS 14368662 14368721 . + 0 Parent=GSCOCT00006460001 | |
| 57889 chr11 manual_curation CDS 14368813 14368859 . + 0 Parent=GSCOCT00006460001 | |
| 57890 chr11 manual_curation CDS 14368949 14369144 . + 2 Parent=GSCOCT00006460001 | |
| 57891 chr11 manual_curation CDS 14369236 14369472 . + 0 Parent=GSCOCT00006460001 | |
| 57892 chr11 manual_curation CDS 14369581 14369903 . + 0 Parent=GSCOCT00006460001 | |
| 57893 chr11 manual_curation CDS 14370001 14370062 . + 2 Parent=GSCOCT00006460001 | |
| 57894 chr11 manual_curation CDS 14371341 14371444 . + 1 Parent=GSCOCT00006460001 | |
| 57895 chr11 manual_curation gene 14375436 14377242 . - . ID=GSCOCG00006461001;Name=Cc11_g03560 | |
| 57896 chr11 manual_curation mRNA 14375436 14377242 . - . ID=GSCOCT00006461001;Parent=GSCOCG00006461001;Name=Cc11_g03560 | |
| 57897 chr11 manual_curation polypeptide 14375553 14377056 . - . ID=GSCOCP00006461001;Dbxref=TAIR:AT3G05330.1,TrEMBL:B9I7T2,TrEMBL:B9MZV3,TrEMBL:F6HYZ3;Derives_from=GSCOCT00006461001;Name=Cc11_g03560;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:cyclin family,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00006461001~ cyclin family~ unknown_gene~ complete;original_location=complement(join(262168..262275%2C261845..261987%2C261675..261730%2C260772..261577));owner=coffea | |
| 57898 chr11 manual_curation exon 14375436 14376358 . - . Parent=GSCOCT00006461001 | |
| 57899 chr11 manual_curation exon 14376456 14376511 . - . Parent=GSCOCT00006461001 | |
| 57900 chr11 manual_curation exon 14376626 14376768 . - . Parent=GSCOCT00006461001 | |
| 57901 chr11 manual_curation exon 14376949 14377242 . - . Parent=GSCOCT00006461001 | |
| 57902 chr11 manual_curation CDS 14375553 14376358 . - 1 Parent=GSCOCT00006461001 | |
| 57903 chr11 manual_curation CDS 14376456 14376511 . - 2 Parent=GSCOCT00006461001 | |
| 57904 chr11 manual_curation CDS 14376626 14376768 . - 0 Parent=GSCOCT00006461001 | |
| 57905 chr11 manual_curation CDS 14376949 14377056 . - 0 Parent=GSCOCT00006461001 | |
| 57906 chr11 manual_curation gene 14381700 14385745 . - . ID=GSCOCG00006462001;Name=Cc11_g03570 | |
| 57907 chr11 manual_curation mRNA 14381700 14385745 . - . ID=GSCOCT00006462001;Parent=GSCOCG00006462001;Name=Cc11_g03570 | |
| 57908 chr11 manual_curation polypeptide 14381700 14385745 . - . ID=GSCOCP00006462001;Dbxref=InterPro:IPR001320,InterPro:IPR001638,InterPro:IPR001828,InterPro:IPR015683,InterPro:IPR017103,PANTHER:PTHR18966,PFAM:PF00060,PFAM:PF00497,PFAM:PF01094,PIR:PIRSF037090,SMART:SM00079,SwissProt:Q8LGN1,SwissProt:Q9FH75,SwissProt:Q9LV72,TAIR:AT3G07520.1,TAIR:AT5G48400.2,TAIR:AT5G48410.1,TrEMBL:A5AD54,TrEMBL:F6GXG0,TrEMBL:F6H9G7;Derives_from=GSCOCT00006462001;Name=Cc11_g03570;Ontology_term=CC_evidence_code:ISS,GO:0004970,GO:0005215,GO:0005234,GO:0006810,GO:0016020,GO:0030288,CC_EC_number:missing_EC_number,PRODUCT:Putative Glutamate receptor 1.3,CC_functional_completeness:complete,CC_gene:GLR1.3,CC_gene:GLR1.2,CC_gene:GLR1.4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00006462001~ Putative Glutamate receptor 1.3~ GLR1.3~ complete;original_location=complement(join(270676..270964%2C269351..270127%2C268836..269302%2C268378..268681%2C267402..267784%2C266919..267260));owner=coffea | |
| 57909 chr11 manual_curation exon 14381700 14382041 . - . Parent=GSCOCT00006462001 | |
| 57910 chr11 manual_curation exon 14382183 14382565 . - . Parent=GSCOCT00006462001 | |
| 57911 chr11 manual_curation exon 14383159 14383462 . - . Parent=GSCOCT00006462001 | |
| 57912 chr11 manual_curation exon 14383617 14384083 . - . Parent=GSCOCT00006462001 | |
| 57913 chr11 manual_curation exon 14384132 14384908 . - . Parent=GSCOCT00006462001 | |
| 57914 chr11 manual_curation exon 14385457 14385745 . - . Parent=GSCOCT00006462001 | |
| 57915 chr11 manual_curation CDS 14381700 14382041 . - 0 Parent=GSCOCT00006462001 | |
| 57916 chr11 manual_curation CDS 14382183 14382565 . - 1 Parent=GSCOCT00006462001 | |
| 57917 chr11 manual_curation CDS 14383159 14383462 . - 0 Parent=GSCOCT00006462001 | |
| 57918 chr11 manual_curation CDS 14383617 14384083 . - 1 Parent=GSCOCT00006462001 | |
| 57919 chr11 manual_curation CDS 14384132 14384908 . - 1 Parent=GSCOCT00006462001 | |
| 57920 chr11 manual_curation CDS 14385457 14385745 . - 0 Parent=GSCOCT00006462001 | |
| 57921 chr11 manual_curation gene 14389902 14394285 . - . ID=GSCOCG00006463001;Name=Cc11_g03580 | |
| 57922 chr11 manual_curation mRNA 14389902 14394285 . - . ID=GSCOCT00006463001;Parent=GSCOCG00006463001;Name=Cc11_g03580 | |
| 57923 chr11 manual_curation polypeptide 14389902 14394285 . - . ID=GSCOCP00006463001;Dbxref=InterPro:IPR001320,InterPro:IPR001638,InterPro:IPR001828,InterPro:IPR015683,InterPro:IPR017103,PANTHER:PTHR18966,PFAM:PF00060,PFAM:PF00497,PFAM:PF01094,PIR:PIRSF037090,SMART:SM00079,SwissProt:Q8LGN1,SwissProt:Q9FH75,SwissProt:Q9LV72,TAIR:AT3G07520.1,TAIR:AT5G48400.2,TAIR:AT5G48410.1,TrEMBL:A5AUG7,TrEMBL:F6GXG0,TrEMBL:F6H9G7;Derives_from=GSCOCT00006463001;Name=Cc11_g03580;Ontology_term=CC_evidence_code:ISS,GO:0004970,GO:0005215,GO:0005234,GO:0006810,GO:0016020,GO:0030288,CC_EC_number:missing_EC_number,PRODUCT:Putative Glutamate receptor 1.3,CC_functional_completeness:complete,CC_gene:GLR1.3,CC_gene:GLR1.2,CC_gene:GLR1.4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00006463001~ Putative Glutamate receptor 1.3~ GLR1.3~ complete;original_location=complement(join(279231..279504%2C277672..278904%2C277158..277496%2C276482..276855%2C275121..275459));owner=coffea | |
| 57924 chr11 manual_curation exon 14389902 14390240 . - . Parent=GSCOCT00006463001 | |
| 57925 chr11 manual_curation exon 14391263 14391636 . - . Parent=GSCOCT00006463001 | |
| 57926 chr11 manual_curation exon 14391939 14392277 . - . Parent=GSCOCT00006463001 | |
| 57927 chr11 manual_curation exon 14392453 14393685 . - . Parent=GSCOCT00006463001 | |
| 57928 chr11 manual_curation exon 14394012 14394285 . - . Parent=GSCOCT00006463001 | |
| 57929 chr11 manual_curation CDS 14389902 14390240 . - 0 Parent=GSCOCT00006463001 | |
| 57930 chr11 manual_curation CDS 14391263 14391636 . - 1 Parent=GSCOCT00006463001 | |
| 57931 chr11 manual_curation CDS 14391939 14392277 . - 1 Parent=GSCOCT00006463001 | |
| 57932 chr11 manual_curation CDS 14392453 14393685 . - 1 Parent=GSCOCT00006463001 | |
| 57933 chr11 manual_curation CDS 14394012 14394285 . - 0 Parent=GSCOCT00006463001 | |
| 57934 chr11 manual_curation gene 14397830 14401158 . - . ID=GSCOCG00006464001;Name=Cc11_g03590 | |
| 57935 chr11 manual_curation mRNA 14397830 14401158 . - . ID=GSCOCT00006464001;Parent=GSCOCG00006464001;Name=Cc11_g03590 | |
| 57936 chr11 manual_curation polypeptide 14397830 14401158 . - . ID=GSCOCP00006464001;Dbxref=InterPro:IPR002495,PFAM:PF01501,SwissProt:F4HZC3,SwissProt:Q8GWW4,SwissProt:Q9FZ37,TAIR:AT1G08990.1,TAIR:AT1G54940.1,TAIR:AT4G33330.2,TrEMBL:A5CAD0,TrEMBL:D7U201,TrEMBL:I1NBZ7;Derives_from=GSCOCT00006464001;Name=Cc11_g03590;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.4.1.186,PRODUCT:Putative UDP-glucuronate,CC_functional_completeness:complete,CC_gene:GUX4,CC_gene:GUX5,CC_gene:GUX2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00006464001~ Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4~ GUX4~ complete;original_location=complement(join(285528..286377%2C283049..283968));owner=coffea | |
| 57937 chr11 manual_curation exon 14397830 14398749 . - . Parent=GSCOCT00006464001 | |
| 57938 chr11 manual_curation exon 14400309 14401158 . - . Parent=GSCOCT00006464001 | |
| 57939 chr11 manual_curation CDS 14397830 14398749 . - 1 Parent=GSCOCT00006464001 | |
| 57940 chr11 manual_curation CDS 14400309 14401158 . - 0 Parent=GSCOCT00006464001 | |
| 57941 chr11 manual_curation gene 14413054 14423836 . - . ID=GSCOCG00006465001;Name=Cc11_g03600 | |
| 57942 chr11 manual_curation mRNA 14413054 14423836 . - . ID=GSCOCT00006465001;Parent=GSCOCG00006465001;Name=Cc11_g03600 | |
| 57943 chr11 manual_curation polypeptide 14413483 14419621 . - . ID=GSCOCP00006465001;Dbxref=InterPro:IPR006476,PFAM:PF09713,TAIR:AT2G46420.1,TAIR:AT3G61700.2,TAIR:AT5G04090.2,TIGRFAMs:TIGR01589,TrEMBL:B9GR05,TrEMBL:D7UCP2,TrEMBL:Q60CZ4;Derives_from=GSCOCT00006465001;Name=Cc11_g03600;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Plant protein 1589 of unknown function,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00006465001~ Plant protein 1589 of unknown function~ unknown_gene~ complete;original_location=complement(join(304826..304840%2C302806..302967%2C302593..302698%2C302121..302303%2C300624..300789%2C300013..300338%2C298872..298961%2C298702..298757));owner=coffea | |
| 57944 chr11 manual_curation exon 14423655 14423836 . - . Parent=GSCOCT00006465001 | |
| 57945 chr11 manual_curation exon 14413054 14413538 . - . Parent=GSCOCT00006465001 | |
| 57946 chr11 manual_curation exon 14413653 14413742 . - . Parent=GSCOCT00006465001 | |
| 57947 chr11 manual_curation exon 14414794 14415119 . - . Parent=GSCOCT00006465001 | |
| 57948 chr11 manual_curation exon 14415405 14415570 . - . Parent=GSCOCT00006465001 | |
| 57949 chr11 manual_curation exon 14416902 14417084 . - . Parent=GSCOCT00006465001 | |
| 57950 chr11 manual_curation exon 14417374 14417479 . - . Parent=GSCOCT00006465001 | |
| 57951 chr11 manual_curation exon 14417587 14417748 . - . Parent=GSCOCT00006465001 | |
| 57952 chr11 manual_curation exon 14419607 14419762 . - . Parent=GSCOCT00006465001 | |
| 57953 chr11 manual_curation CDS 14413483 14413538 . - 1 Parent=GSCOCT00006465001 | |
| 57954 chr11 manual_curation CDS 14413653 14413742 . - 1 Parent=GSCOCT00006465001 | |
| 57955 chr11 manual_curation CDS 14414794 14415119 . - 2 Parent=GSCOCT00006465001 | |
| 57956 chr11 manual_curation CDS 14415405 14415570 . - 1 Parent=GSCOCT00006465001 | |
| 57957 chr11 manual_curation CDS 14416902 14417084 . - 1 Parent=GSCOCT00006465001 | |
| 57958 chr11 manual_curation CDS 14417374 14417479 . - 0 Parent=GSCOCT00006465001 | |
| 57959 chr11 manual_curation CDS 14417587 14417748 . - 0 Parent=GSCOCT00006465001 | |
| 57960 chr11 manual_curation CDS 14419607 14419621 . - 0 Parent=GSCOCT00006465001 | |
| 57961 chr11 manual_curation gene 14593553 14594672 . + . ID=GSCOCG00006467001;Name=Cc11_g03610 | |
| 57962 chr11 manual_curation mRNA 14593553 14594672 . + . ID=GSCOCT00006467001;Parent=GSCOCG00006467001;Name=Cc11_g03610 | |
| 57963 chr11 manual_curation polypeptide 14594442 14594672 . + . ID=GSCOCP00006467001;Derives_from=GSCOCT00006467001;Name=Cc11_g03610;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00006467001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=479661..479891;owner=coffea | |
| 57964 chr11 manual_curation exon 14593553 14593771 . + . Parent=GSCOCT00006467001 | |
| 57965 chr11 manual_curation exon 14594233 14594672 . + . Parent=GSCOCT00006467001 | |
| 57966 chr11 manual_curation CDS 14594442 14594672 . + 0 Parent=GSCOCT00006467001 | |
| 57967 chr11 manual_curation gene 14672801 14674033 . - . ID=GSCOCG00033946001;Name=Cc11_g03620 | |
| 57968 chr11 manual_curation mRNA 14672801 14674033 . - . ID=GSCOCT00033946001;Parent=GSCOCG00033946001;Name=Cc11_g03620 | |
| 57969 chr11 manual_curation polypeptide 14672801 14674033 . - . ID=GSCOCP00033946001;Dbxref=InterPro:IPR000719,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017442,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00108,SUPERFAMILY:SSF56112,SwissProt:Q39010,SwissProt:Q39011,SwissProt:Q39012,TAIR:AT1G06390.1,TAIR:AT2G30980.1,TAIR:AT4G18710.1,TrEMBL:B9S8B2,TrEMBL:F6H523,TrEMBL:G7IM77;Derives_from=GSCOCT00033946001;Name=Cc11_g03620;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.26,PRODUCT:Shaggy-related protein kinase eta,CC_functional_completeness:fragment,CC_gene:ASK7,CC_gene:ASK6,CC_gene:ASK9;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033946001~ Shaggy-related protein kinase eta~ ASK7~ fragment;original_location=complement(join(8151..8257%2C8003..8069%2C7861..7917%2C7025..7117));owner=coffea | |
| 57970 chr11 manual_curation exon 14672801 14672893 . - . Parent=GSCOCT00033946001 | |
| 57971 chr11 manual_curation exon 14673637 14673693 . - . Parent=GSCOCT00033946001 | |
| 57972 chr11 manual_curation exon 14673779 14673845 . - . Parent=GSCOCT00033946001 | |
| 57973 chr11 manual_curation exon 14673927 14674033 . - . Parent=GSCOCT00033946001 | |
| 57974 chr11 manual_curation CDS 14672801 14672893 . - 0 Parent=GSCOCT00033946001 | |
| 57975 chr11 manual_curation CDS 14673637 14673693 . - 0 Parent=GSCOCT00033946001 | |
| 57976 chr11 manual_curation CDS 14673779 14673845 . - 2 Parent=GSCOCT00033946001 | |
| 57977 chr11 manual_curation CDS 14673927 14674033 . - 0 Parent=GSCOCT00033946001 | |
| 57978 chr11 manual_curation gene 14674122 14674693 . - . ID=GSCOCG00033947001;Name=Cc11_g03630 | |
| 57979 chr11 manual_curation mRNA 14674122 14674693 . - . ID=GSCOCT00033947001;Parent=GSCOCG00033947001;Name=Cc11_g03630 | |
| 57980 chr11 manual_curation polypeptide 14674122 14674693 . - . ID=GSCOCP00033947001;Dbxref=SwissProt:Q39010,SwissProt:Q39011,SwissProt:Q39012,TAIR:AT1G06390.1,TAIR:AT2G30980.1,TAIR:AT4G18710.1,TrEMBL:D7M9F8,TrEMBL:D7TJN3,TrEMBL:E4MVH8;Derives_from=GSCOCT00033947001;Name=Cc11_g03630;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Shaggy-related protein kinase eta,CC_functional_completeness:fragment,CC_gene:ASK7,CC_gene:ASK9,CC_gene:ASK6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033947001~ Shaggy-related protein kinase eta~ ASK7~ fragment;original_location=complement(join(8828..8917%2C8521..8571%2C8346..8429));owner=coffea | |
| 57981 chr11 manual_curation exon 14674122 14674205 . - . Parent=GSCOCT00033947001 | |
| 57982 chr11 manual_curation exon 14674297 14674347 . - . Parent=GSCOCT00033947001 | |
| 57983 chr11 manual_curation exon 14674604 14674693 . - . Parent=GSCOCT00033947001 | |
| 57984 chr11 manual_curation CDS 14674122 14674205 . - 0 Parent=GSCOCT00033947001 | |
| 57985 chr11 manual_curation CDS 14674297 14674347 . - 0 Parent=GSCOCT00033947001 | |
| 57986 chr11 manual_curation CDS 14674604 14674693 . - 0 Parent=GSCOCT00033947001 | |
| 57987 chr11 manual_curation gene 14924633 14928649 . - . ID=GSCOCG00033952001;Name=Cc11_g03640 | |
| 57988 chr11 manual_curation mRNA 14924633 14928649 . - . ID=GSCOCT00033952001;Parent=GSCOCG00033952001;Name=Cc11_g03640 | |
| 57989 chr11 manual_curation polypeptide 14924633 14928649 . - . ID=GSCOCP00033952001;Dbxref=GENE3D:G3DSA:2.120.10.80,InterPro:IPR006652,InterPro:IPR011043,InterPro:IPR013089,InterPro:IPR015915,PANTHER:PTHR23230,PFAM:PF01344,SMART:SM00612,SUPERFAMILY:SSF50965,SwissProt:Q0V7S6,SwissProt:Q0WW40,SwissProt:Q9M1W7,TAIR:AT1G16250.1,TAIR:AT3G63220.2,TAIR:AT4G03030.1,TrEMBL:B9GS45,TrEMBL:B9S4V7,TrEMBL:F6HZH3;Derives_from=GSCOCT00033952001;Name=Cc11_g03640;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:F-box/kelch-repeat protein OR23,CC_functional_completeness:modules,CC_gene:OR23,CC_gene:At1g16250,CC_gene:SKIP30;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033952001~ F-box/kelch-repeat protein OR23~ OR23~ modules;original_location=complement(join(262597..262873%2C260294..261317%2C258857..259148));owner=coffea | |
| 57990 chr11 manual_curation exon 14924633 14924924 . - . Parent=GSCOCT00033952001 | |
| 57991 chr11 manual_curation exon 14926070 14927093 . - . Parent=GSCOCT00033952001 | |
| 57992 chr11 manual_curation exon 14928373 14928649 . - . Parent=GSCOCT00033952001 | |
| 57993 chr11 manual_curation CDS 14924633 14924924 . - 2 Parent=GSCOCT00033952001 | |
| 57994 chr11 manual_curation CDS 14926070 14927093 . - 1 Parent=GSCOCT00033952001 | |
| 57995 chr11 manual_curation CDS 14928373 14928649 . - 0 Parent=GSCOCT00033952001 | |
| 57996 chr11 manual_curation gene 14947111 14947348 . - . ID=GSCOCG00033955001;Name=Cc11_g03650 | |
| 57997 chr11 manual_curation mRNA 14947111 14947348 . - . ID=GSCOCT00033955001;Parent=GSCOCG00033955001;Name=Cc11_g03650 | |
| 57998 chr11 manual_curation polypeptide 14947111 14947348 . - . ID=GSCOCP00033955001;Derives_from=GSCOCT00033955001;Name=Cc11_g03650;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033955001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(281486..281572%2C281335..281391));owner=coffea | |
| 57999 chr11 manual_curation exon 14947111 14947167 . - . Parent=GSCOCT00033955001 | |
| 58000 chr11 manual_curation exon 14947262 14947348 . - . Parent=GSCOCT00033955001 | |
| 58001 chr11 manual_curation CDS 14947111 14947167 . - 0 Parent=GSCOCT00033955001 | |
| 58002 chr11 manual_curation CDS 14947262 14947348 . - 0 Parent=GSCOCT00033955001 | |
| 58003 chr11 manual_curation gene 14948952 14950539 . - . ID=GSCOCG00033956001;Name=Cc11_g03660 | |
| 58004 chr11 manual_curation mRNA 14948952 14950539 . - . ID=GSCOCT00033956001;Parent=GSCOCG00033956001;Name=Cc11_g03660 | |
| 58005 chr11 manual_curation polypeptide 14948952 14950539 . - . ID=GSCOCP00033956001;Dbxref=InterPro:IPR000352,PFAM:PF00472,SwissProt:A3NX26,SwissProt:A7ZE19,SwissProt:Q63SP0,TAIR:AT1G33330.1,TrEMBL:B9N1R9,TrEMBL:C5XEP3,TrEMBL:I1MQB0;Derives_from=GSCOCT00033956001;Name=Cc11_g03660;Ontology_term=CC_evidence_code:ISS,GO:0003747,GO:0006415,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterized protein (Fragment),CC_functional_completeness:modules,CC_gene:prfB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033956001~ Uncharacterized protein (Fragment)~ prfB~ modules;original_location=complement(join(284190..284763%2C283581..283711%2C283411..283481%2C283176..283293));owner=coffea | |
| 58006 chr11 manual_curation exon 14948952 14949069 . - . Parent=GSCOCT00033956001 | |
| 58007 chr11 manual_curation exon 14949187 14949257 . - . Parent=GSCOCT00033956001 | |
| 58008 chr11 manual_curation exon 14949357 14949487 . - . Parent=GSCOCT00033956001 | |
| 58009 chr11 manual_curation exon 14949966 14950539 . - . Parent=GSCOCT00033956001 | |
| 58010 chr11 manual_curation CDS 14948952 14949069 . - 2 Parent=GSCOCT00033956001 | |
| 58011 chr11 manual_curation CDS 14949187 14949257 . - 0 Parent=GSCOCT00033956001 | |
| 58012 chr11 manual_curation CDS 14949357 14949487 . - 1 Parent=GSCOCT00033956001 | |
| 58013 chr11 manual_curation CDS 14949966 14950539 . - 0 Parent=GSCOCT00033956001 | |
| 58014 chr11 manual_curation gene 14953637 14963089 . - . ID=GSCOCG00033957001;Name=Cc11_g03670 | |
| 58015 chr11 manual_curation mRNA 14953637 14963089 . - . ID=GSCOCT00033957001;Parent=GSCOCG00033957001;Name=Cc11_g03670 | |
| 58016 chr11 manual_curation polypeptide 14954928 14962035 . - . ID=GSCOCP00033957001;Dbxref=GENE3D:G3DSA:1.10.20.10,InterPro:IPR003228,InterPro:IPR009072,PFAM:PF03847,SUPERFAMILY:SSF47113,SwissProt:Q16514,SwissProt:Q3T174,SwissProt:Q8VE65,TAIR:AT1G17440.1,TAIR:AT3G10070.1,TrEMBL:B9GW25,TrEMBL:D7TZT6,TrEMBL:D9ZIS8;Derives_from=GSCOCT00033957001;Name=Cc11_g03670;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0005669,GO:0006352,GO:0016986,CC_EC_number:missing_EC_number,PRODUCT:Transcription initiation factor TFIID subunit 12,CC_functional_completeness:modules,CC_gene:Taf12,CC_gene:TAF12;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033957001~ Transcription initiation factor TFIID subunit 12~ Taf12~ modules;original_location=complement(join(296119..296259%2C295457..295663%2C291670..292293%2C291346..291420%2C290356..290434%2C289865..289929%2C289332..289367%2C289152..289241));owner=coffea | |
| 58017 chr11 manual_curation exon 14953637 14955017 . - . Parent=GSCOCT00033957001 | |
| 58018 chr11 manual_curation exon 14955108 14955143 . - . Parent=GSCOCT00033957001 | |
| 58019 chr11 manual_curation exon 14955641 14955705 . - . Parent=GSCOCT00033957001 | |
| 58020 chr11 manual_curation exon 14956132 14956210 . - . Parent=GSCOCT00033957001 | |
| 58021 chr11 manual_curation exon 14957122 14957196 . - . Parent=GSCOCT00033957001 | |
| 58022 chr11 manual_curation exon 14957446 14958069 . - . Parent=GSCOCT00033957001 | |
| 58023 chr11 manual_curation exon 14961233 14961439 . - . Parent=GSCOCT00033957001 | |
| 58024 chr11 manual_curation exon 14961895 14963089 . - . Parent=GSCOCT00033957001 | |
| 58025 chr11 manual_curation CDS 14954928 14955017 . - 0 Parent=GSCOCT00033957001 | |
| 58026 chr11 manual_curation CDS 14955108 14955143 . - 0 Parent=GSCOCT00033957001 | |
| 58027 chr11 manual_curation CDS 14955641 14955705 . - 1 Parent=GSCOCT00033957001 | |
| 58028 chr11 manual_curation CDS 14956132 14956210 . - 0 Parent=GSCOCT00033957001 | |
| 58029 chr11 manual_curation CDS 14957122 14957196 . - 0 Parent=GSCOCT00033957001 | |
| 58030 chr11 manual_curation CDS 14957446 14958069 . - 0 Parent=GSCOCT00033957001 | |
| 58031 chr11 manual_curation CDS 14961233 14961439 . - 0 Parent=GSCOCT00033957001 | |
| 58032 chr11 manual_curation CDS 14961895 14962035 . - 0 Parent=GSCOCT00033957001 | |
| 58033 chr11 manual_curation gene 14996367 14997154 . - . ID=GSCOCG00033959001;Name=Cc11_g03680 | |
| 58034 chr11 manual_curation mRNA 14996367 14997154 . - . ID=GSCOCT00033959001;Parent=GSCOCG00033959001;Name=Cc11_g03680 | |
| 58035 chr11 manual_curation polypeptide 14996367 14997154 . - . ID=GSCOCP00033959001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001356,InterPro:IPR009057,InterPro:IPR012287,PFAM:PF00046,PROFILE:PS50071,SMART:SM00389,SUPERFAMILY:SSF46689,SwissProt:Q69T58,SwissProt:Q6EPF0,SwissProt:Q7Y0V7,TAIR:AT3G61150.1,TAIR:AT4G00730.1,TAIR:AT5G52170.1,TrEMBL:B6SRL8,TrEMBL:G2J5S7,TrEMBL:Q4R0U0;Derives_from=GSCOCT00033959001;Name=Cc11_g03680;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,GO:0043565,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative Homeobox-leucine zipper protein ROC8,CC_functional_completeness:fragment,CC_gene:ROC8,CC_gene:ROC5,CC_gene:ROC6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033959001~ Putative Homeobox-leucine zipper protein ROC8~ ROC8~ fragment;original_location=complement(join(331263..331378%2C330966..331083%2C330591..330842));owner=coffea | |
| 58036 chr11 manual_curation exon 14996367 14996618 . - . Parent=GSCOCT00033959001 | |
| 58037 chr11 manual_curation exon 14996742 14996859 . - . Parent=GSCOCT00033959001 | |
| 58038 chr11 manual_curation exon 14997039 14997154 . - . Parent=GSCOCT00033959001 | |
| 58039 chr11 manual_curation CDS 14996367 14996618 . - 0 Parent=GSCOCT00033959001 | |
| 58040 chr11 manual_curation CDS 14996742 14996859 . - 2 Parent=GSCOCT00033959001 | |
| 58041 chr11 manual_curation CDS 14997039 14997154 . - 0 Parent=GSCOCT00033959001 | |
| 58042 chr11 manual_curation gene 15037358 15041387 . - . ID=GSCOCG00033961001;Name=Cc11_g03690 | |
| 58043 chr11 manual_curation mRNA 15037358 15041387 . - . ID=GSCOCT00033961001;Parent=GSCOCG00033961001;Name=Cc11_g03690 | |
| 58044 chr11 manual_curation polypeptide 15037634 15041387 . - . ID=GSCOCP00033961001;Dbxref=InterPro:IPR000073,PFAM:PF00561,SwissProt:O35678,SwissProt:Q8R431,SwissProt:Q99685,TAIR:AT1G77420.1,TAIR:AT3G62860.1,TAIR:AT5G16120.2,TrEMBL:B9N233,TrEMBL:B9S5F5,TrEMBL:I1LX24;Derives_from=GSCOCT00033961001;Name=Cc11_g03690;Ontology_term=CC_evidence_code:ISS,CC_EC_number:3.1.1.23,PRODUCT:Putative Monoglyceride lipase,CC_functional_completeness:fragment,CC_gene:MGLL,CC_gene:Mgll;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033961001~ Putative Monoglyceride lipase~ MGLL~ fragment;original_location=complement(join(375509..375611%2C372767..372897%2C372547..372684%2C372284..372382%2C371858..372070));owner=coffea | |
| 58045 chr11 manual_curation exon 15037358 15037846 . - . Parent=GSCOCT00033961001 | |
| 58046 chr11 manual_curation exon 15038060 15038158 . - . Parent=GSCOCT00033961001 | |
| 58047 chr11 manual_curation exon 15038323 15038460 . - . Parent=GSCOCT00033961001 | |
| 58048 chr11 manual_curation exon 15038543 15038673 . - . Parent=GSCOCT00033961001 | |
| 58049 chr11 manual_curation exon 15041285 15041387 . - . Parent=GSCOCT00033961001 | |
| 58050 chr11 manual_curation CDS 15037634 15037846 . - 0 Parent=GSCOCT00033961001 | |
| 58051 chr11 manual_curation CDS 15038060 15038158 . - 0 Parent=GSCOCT00033961001 | |
| 58052 chr11 manual_curation CDS 15038323 15038460 . - 0 Parent=GSCOCT00033961001 | |
| 58053 chr11 manual_curation CDS 15038543 15038673 . - 1 Parent=GSCOCT00033961001 | |
| 58054 chr11 manual_curation CDS 15041285 15041387 . - 0 Parent=GSCOCT00033961001 | |
| 58055 chr11 manual_curation gene 15041510 15043495 . - . ID=GSCOCG00033962001;Name=Cc11_g03700 | |
| 58056 chr11 manual_curation mRNA 15041510 15043495 . - . ID=GSCOCT00033962001;Parent=GSCOCG00033962001;Name=Cc11_g03700 | |
| 58057 chr11 manual_curation polypeptide 15041510 15043309 . - . ID=GSCOCP00033962001;Dbxref=TAIR:AT1G77420.1,TAIR:AT5G16120.2,TrEMBL:B9N233,TrEMBL:G7ZY17,TrEMBL:G7ZY18;Derives_from=GSCOCT00033962001;Name=Cc11_g03700;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:alpha/beta-Hydrolases superfamily protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033962001~ alpha/beta-Hydrolases superfamily protein~ unknown_gene~ fragment;original_location=complement(join(377390..377533%2C376261..376290%2C375734..375865));owner=coffea | |
| 58058 chr11 manual_curation exon 15041510 15041641 . - . Parent=GSCOCT00033962001 | |
| 58059 chr11 manual_curation exon 15042037 15042066 . - . Parent=GSCOCT00033962001 | |
| 58060 chr11 manual_curation exon 15043166 15043495 . - . Parent=GSCOCT00033962001 | |
| 58061 chr11 manual_curation CDS 15041510 15041641 . - 0 Parent=GSCOCT00033962001 | |
| 58062 chr11 manual_curation CDS 15042037 15042066 . - 0 Parent=GSCOCT00033962001 | |
| 58063 chr11 manual_curation CDS 15043166 15043309 . - 0 Parent=GSCOCT00033962001 | |
| 58064 chr11 manual_curation gene 15061342 15065521 . - . ID=GSCOCG00033965001;Name=Cc11_g03710 | |
| 58065 chr11 manual_curation mRNA 15061342 15065521 . - . ID=GSCOCT00033965001;Parent=GSCOCG00033965001;Name=Cc11_g03710 | |
| 58066 chr11 manual_curation polypeptide 15061342 15065406 . - . ID=GSCOCP00033965001;Dbxref=InterPro:IPR000073,InterPro:IPR022742,PFAM:PF12146,PRINTS:PR00111,SwissProt:O35678,SwissProt:Q8R431,SwissProt:Q99685,TAIR:AT1G77420.1,TAIR:AT3G62860.1,TAIR:AT5G16120.2,TrEMBL:B9N233,TrEMBL:B9S5F5,TrEMBL:C6TNV1;Derives_from=GSCOCT00033965001;Name=Cc11_g03710;Ontology_term=CC_evidence_code:ISS,CC_EC_number:3.1.1.23,PRODUCT:Putative Monoglyceride lipase,CC_functional_completeness:complete,CC_gene:MGLL,CC_gene:Mgll;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033965001~ Putative Monoglyceride lipase~ MGLL~ complete;original_location=complement(join(399487..399630%2C398367..398396%2C397845..397972%2C397616..397752%2C396469..396599%2C396249..396386%2C395991..396089%2C395566..395778));owner=coffea | |
| 58067 chr11 manual_curation exon 15061342 15061554 . - . Parent=GSCOCT00033965001 | |
| 58068 chr11 manual_curation exon 15061767 15061865 . - . Parent=GSCOCT00033965001 | |
| 58069 chr11 manual_curation exon 15062025 15062162 . - . Parent=GSCOCT00033965001 | |
| 58070 chr11 manual_curation exon 15062245 15062375 . - . Parent=GSCOCT00033965001 | |
| 58071 chr11 manual_curation exon 15063392 15063528 . - . Parent=GSCOCT00033965001 | |
| 58072 chr11 manual_curation exon 15063621 15063748 . - . Parent=GSCOCT00033965001 | |
| 58073 chr11 manual_curation exon 15064143 15064172 . - . Parent=GSCOCT00033965001 | |
| 58074 chr11 manual_curation exon 15065263 15065521 . - . Parent=GSCOCT00033965001 | |
| 58075 chr11 manual_curation CDS 15061342 15061554 . - 0 Parent=GSCOCT00033965001 | |
| 58076 chr11 manual_curation CDS 15061767 15061865 . - 0 Parent=GSCOCT00033965001 | |
| 58077 chr11 manual_curation CDS 15062025 15062162 . - 0 Parent=GSCOCT00033965001 | |
| 58078 chr11 manual_curation CDS 15062245 15062375 . - 1 Parent=GSCOCT00033965001 | |
| 58079 chr11 manual_curation CDS 15063392 15063528 . - 2 Parent=GSCOCT00033965001 | |
| 58080 chr11 manual_curation CDS 15063621 15063748 . - 0 Parent=GSCOCT00033965001 | |
| 58081 chr11 manual_curation CDS 15064143 15064172 . - 0 Parent=GSCOCT00033965001 | |
| 58082 chr11 manual_curation CDS 15065263 15065406 . - 0 Parent=GSCOCT00033965001 | |
| 58083 chr11 manual_curation gene 15075934 15077036 . - . ID=GSCOCG00033966001;Name=Cc11_g03720 | |
| 58084 chr11 manual_curation mRNA 15075934 15077036 . - . ID=GSCOCT00033966001;Parent=GSCOCG00033966001;Name=Cc11_g03720 | |
| 58085 chr11 manual_curation polypeptide 15075934 15077036 . - . ID=GSCOCP00033966001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001356,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR017970,PFAM:PF00046,PROFILE:PS50071,PROSITE:PS00027,SMART:SM00389,SUPERFAMILY:SSF46689,SwissProt:A2YR02,SwissProt:A3BPF2,SwissProt:Q69T58,TAIR:AT1G05230.1,TAIR:AT1G73360.1,TAIR:AT4G21750.1,TrEMBL:C5X640,TrEMBL:D7TA28,TrEMBL:G2J5S7;Derives_from=GSCOCT00033966001;Name=Cc11_g03720;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,GO:0005634,GO:0030528,GO:0043565,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:ROC8,CC_gene:ROC7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033966001~ Hypothetical protein~ ROC8~ missing_functional_completeness;original_location=complement(join(411180..411260%2C410847..410893%2C410571..410673%2C410158..410454));owner=coffea | |
| 58086 chr11 manual_curation exon 15075934 15076230 . - . Parent=GSCOCT00033966001 | |
| 58087 chr11 manual_curation exon 15076347 15076449 . - . Parent=GSCOCT00033966001 | |
| 58088 chr11 manual_curation exon 15076623 15076669 . - . Parent=GSCOCT00033966001 | |
| 58089 chr11 manual_curation exon 15076956 15077036 . - . Parent=GSCOCT00033966001 | |
| 58090 chr11 manual_curation CDS 15075934 15076230 . - 0 Parent=GSCOCT00033966001 | |
| 58091 chr11 manual_curation CDS 15076347 15076449 . - 2 Parent=GSCOCT00033966001 | |
| 58092 chr11 manual_curation CDS 15076623 15076669 . - 0 Parent=GSCOCT00033966001 | |
| 58093 chr11 manual_curation CDS 15076956 15077036 . - 0 Parent=GSCOCT00033966001 | |
| 58094 chr11 manual_curation gene 15104112 15104611 . + . ID=GSCOCG00033967001;Name=Cc11_g03730 | |
| 58095 chr11 manual_curation mRNA 15104112 15104611 . + . ID=GSCOCT00033967001;Parent=GSCOCG00033967001;Name=Cc11_g03730 | |
| 58096 chr11 manual_curation polypeptide 15104112 15104438 . + . ID=GSCOCP00033967001;Derives_from=GSCOCT00033967001;Name=Cc11_g03730;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033967001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(438336..438353%2C438513..438662);owner=coffea | |
| 58097 chr11 manual_curation exon 15104112 15104129 . + . Parent=GSCOCT00033967001 | |
| 58098 chr11 manual_curation exon 15104289 15104611 . + . Parent=GSCOCT00033967001 | |
| 58099 chr11 manual_curation CDS 15104112 15104129 . + 0 Parent=GSCOCT00033967001 | |
| 58100 chr11 manual_curation CDS 15104289 15104438 . + 0 Parent=GSCOCT00033967001 | |
| 58101 chr11 manual_curation gene 15291789 15292958 . + . ID=GSCOCG00033969001;Name=Cc11_g03740 | |
| 58102 chr11 manual_curation mRNA 15291789 15292958 . + . ID=GSCOCT00033969001;Parent=GSCOCG00033969001;Name=Cc11_g03740 | |
| 58103 chr11 manual_curation polypeptide 15291789 15292958 . + . ID=GSCOCP00033969001;Dbxref=InterPro:IPR000795,InterPro:IPR015760,PANTHER:PTHR23115:SF41,PFAM:PF00009,PRINTS:PR00315,SwissProt:B7KIU2,SwissProt:P57997,SwissProt:Q9SHI1,TAIR:AT1G17220.1,TAIR:AT1G21160.1,TAIR:AT4G11160.1,TrEMBL:A5B2X2,TrEMBL:F6H4W1,TrEMBL:G7IJ63;Derives_from=GSCOCT00033969001;Name=Cc11_g03740;Ontology_term=CC_evidence_code:ISS,GO:0003924,GO:0005525,CC_EC_number:missing_EC_number,PRODUCT:Translation initiation factor IF-2%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:IF2CP,CC_gene:At1g17220,CC_gene:infB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033969001~ Translation initiation factor IF-2%2C chloroplastic~ IF2CP~ fragment;original_location=join(626013..626126%2C626207..626290%2C626540..626572%2C626724..626837%2C627012..627182);owner=coffea | |
| 58104 chr11 manual_curation exon 15291789 15291902 . + . Parent=GSCOCT00033969001 | |
| 58105 chr11 manual_curation exon 15291983 15292066 . + . Parent=GSCOCT00033969001 | |
| 58106 chr11 manual_curation exon 15292316 15292348 . + . Parent=GSCOCT00033969001 | |
| 58107 chr11 manual_curation exon 15292500 15292613 . + . Parent=GSCOCT00033969001 | |
| 58108 chr11 manual_curation exon 15292788 15292958 . + . Parent=GSCOCT00033969001 | |
| 58109 chr11 manual_curation CDS 15291789 15291902 . + 0 Parent=GSCOCT00033969001 | |
| 58110 chr11 manual_curation CDS 15291983 15292066 . + 0 Parent=GSCOCT00033969001 | |
| 58111 chr11 manual_curation CDS 15292316 15292348 . + 0 Parent=GSCOCT00033969001 | |
| 58112 chr11 manual_curation CDS 15292500 15292613 . + 0 Parent=GSCOCT00033969001 | |
| 58113 chr11 manual_curation CDS 15292788 15292958 . + 0 Parent=GSCOCT00033969001 | |
| 58114 chr11 manual_curation gene 15413031 15413852 . + . ID=GSCOCG00033971001;Name=Cc11_g03750 | |
| 58115 chr11 manual_curation mRNA 15413031 15413852 . + . ID=GSCOCT00033971001;Parent=GSCOCG00033971001;Name=Cc11_g03750 | |
| 58116 chr11 manual_curation polypeptide 15413031 15413852 . + . ID=GSCOCP00033971001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001356,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR015703,InterPro:IPR017970,PANTHER:PTHR19418:SF133,PFAM:PF00046,PROFILE:PS50071,PROSITE:PS00027,SMART:SM00389,SUPERFAMILY:SSF46689,SwissProt:A2YR02,SwissProt:A3BPF2,SwissProt:Q69T58,TAIR:AT1G05230.1,TAIR:AT1G73360.1,TAIR:AT4G00730.1,TrEMBL:B9MX27,TrEMBL:D7TA28,TrEMBL:Q66Q67;Derives_from=GSCOCT00033971001;Name=Cc11_g03750;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,GO:0005634,GO:0030528,GO:0043565,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative Homeobox-leucine zipper protein ROC8,CC_functional_completeness:fragment,CC_gene:ROC8,CC_gene:ROC7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033971001~ Putative Homeobox-leucine zipper protein ROC8~ ROC8~ fragment;original_location=join(747255..747367%2C747572..747689%2C747810..748076);owner=coffea | |
| 58117 chr11 manual_curation exon 15413031 15413143 . + . Parent=GSCOCT00033971001 | |
| 58118 chr11 manual_curation exon 15413348 15413465 . + . Parent=GSCOCT00033971001 | |
| 58119 chr11 manual_curation exon 15413586 15413852 . + . Parent=GSCOCT00033971001 | |
| 58120 chr11 manual_curation CDS 15413031 15413143 . + 0 Parent=GSCOCT00033971001 | |
| 58121 chr11 manual_curation CDS 15413348 15413465 . + 2 Parent=GSCOCT00033971001 | |
| 58122 chr11 manual_curation CDS 15413586 15413852 . + 0 Parent=GSCOCT00033971001 | |
| 58123 chr11 manual_curation gene 15457875 15459765 . + . ID=GSCOCG00033972001;Name=Cc11_g03760 | |
| 58124 chr11 manual_curation mRNA 15457875 15459765 . + . ID=GSCOCT00033972001;Parent=GSCOCG00033972001;Name=Cc11_g03760 | |
| 58125 chr11 manual_curation polypeptide 15457875 15459765 . + . ID=GSCOCP00033972001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001356,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR015703,InterPro:IPR017970,PANTHER:PTHR19418:SF133,PFAM:PF00046,PROFILE:PS50071,PROSITE:PS00027,SMART:SM00389,SUPERFAMILY:SSF46689,SwissProt:A2YR02,SwissProt:Q69T58,SwissProt:Q9FX31,TAIR:AT1G05230.1,TAIR:AT1G73360.1,TAIR:AT4G00730.1,TrEMBL:D7TA28,TrEMBL:D8SP82,TrEMBL:Q66Q67;Derives_from=GSCOCT00033972001;Name=Cc11_g03760;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,GO:0005634,GO:0030528,GO:0043565,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein HDZ42-2,CC_functional_completeness:fragment,CC_gene:HDG11,CC_gene:ROC8,CC_gene:ROC7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033972001~ Putative uncharacterized protein HDZ42-2~ HDG11~ fragment;original_location=join(792099..792211%2C793441..793558%2C793675..793989);owner=coffea | |
| 58126 chr11 manual_curation exon 15457875 15457987 . + . Parent=GSCOCT00033972001 | |
| 58127 chr11 manual_curation exon 15459217 15459334 . + . Parent=GSCOCT00033972001 | |
| 58128 chr11 manual_curation exon 15459451 15459765 . + . Parent=GSCOCT00033972001 | |
| 58129 chr11 manual_curation CDS 15457875 15457987 . + 0 Parent=GSCOCT00033972001 | |
| 58130 chr11 manual_curation CDS 15459217 15459334 . + 2 Parent=GSCOCT00033972001 | |
| 58131 chr11 manual_curation CDS 15459451 15459765 . + 0 Parent=GSCOCT00033972001 | |
| 58132 chr11 manual_curation gene 15465872 15471071 . - . ID=GSCOCG00033974001;Name=Cc11_g03770 | |
| 58133 chr11 manual_curation mRNA 15465872 15471071 . - . ID=GSCOCT00033974001;Parent=GSCOCG00033974001;Name=Cc11_g03770 | |
| 58134 chr11 manual_curation polypeptide 15466648 15470930 . - . ID=GSCOCP00033974001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q6L3L0,SwissProt:Q6L3N7,SwissProt:Q6L3Z7,TAIR:AT1G58400.1,TAIR:AT5G43470.1,TAIR:AT5G48620.1,TrEMBL:A0FD16,TrEMBL:A0FD19,TrEMBL:A1X877;Derives_from=GSCOCT00033974001;Name=Cc11_g03770;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative Disease resistance protein (CC-NBS-LRR class) family,CC_functional_completeness:complete,CC_gene:R1B-23,CC_gene:R1C-3,CC_gene:R1B-14;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033974001~ Putative Disease resistance protein (CC-NBS-LRR class) family~ R1B-23~ complete;original_location=complement(join(804696..805154%2C800872..803178));owner=coffea | |
| 58135 chr11 manual_curation exon 15465872 15468954 . - . Parent=GSCOCT00033974001 | |
| 58136 chr11 manual_curation exon 15470472 15471071 . - . Parent=GSCOCT00033974001 | |
| 58137 chr11 manual_curation CDS 15466648 15468954 . - 0 Parent=GSCOCT00033974001 | |
| 58138 chr11 manual_curation CDS 15470472 15470930 . - 0 Parent=GSCOCT00033974001 | |
| 58139 chr11 manual_curation gene 15609815 15610581 . + . ID=GSCOCG00033977001;Name=Cc11_g03780 | |
| 58140 chr11 manual_curation mRNA 15609815 15610581 . + . ID=GSCOCT00033977001;Parent=GSCOCG00033977001;Name=Cc11_g03780 | |
| 58141 chr11 manual_curation polypeptide 15609815 15610581 . + . ID=GSCOCP00033977001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001356,InterPro:IPR009057,InterPro:IPR012287,PFAM:PF00046,PROFILE:PS50071,SMART:SM00389,SUPERFAMILY:SSF46689,SwissProt:Q69T58,SwissProt:Q6EPF0,SwissProt:Q9LTK3,TAIR:AT1G73360.1,TAIR:AT4G00730.1,TAIR:AT5G52170.1,TrEMBL:A5B3F3,TrEMBL:B9H3K4,TrEMBL:D7TA28;Derives_from=GSCOCT00033977001;Name=Cc11_g03780;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,GO:0043565,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:ROC5,CC_gene:HDG7,CC_gene:ROC8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033977001~ Hypothetical protein~ ROC5~ missing_functional_completeness;original_location=join(944039..944193%2C944321..944438%2C944563..944805);owner=coffea | |
| 58142 chr11 manual_curation exon 15609815 15609969 . + . Parent=GSCOCT00033977001 | |
| 58143 chr11 manual_curation exon 15610097 15610214 . + . Parent=GSCOCT00033977001 | |
| 58144 chr11 manual_curation exon 15610339 15610581 . + . Parent=GSCOCT00033977001 | |
| 58145 chr11 manual_curation CDS 15609815 15609969 . + 0 Parent=GSCOCT00033977001 | |
| 58146 chr11 manual_curation CDS 15610097 15610214 . + 2 Parent=GSCOCT00033977001 | |
| 58147 chr11 manual_curation CDS 15610339 15610581 . + 0 Parent=GSCOCT00033977001 | |
| 58148 chr11 manual_curation gene 15691634 15692575 . - . ID=GSCOCG00033980001;Name=Cc11_g03790 | |
| 58149 chr11 manual_curation mRNA 15691634 15692575 . - . ID=GSCOCT00033980001;Parent=GSCOCG00033980001;Name=Cc11_g03790 | |
| 58150 chr11 manual_curation polypeptide 15691634 15692575 . - . ID=GSCOCP00033980001;Dbxref=InterPro:IPR002182,PFAM:PF00931,SwissProt:Q60CZ8,SwissProt:Q6L403,SwissProt:Q6L438,TAIR:AT1G50180.1,TAIR:AT3G46530.1,TAIR:AT3G46730.1,TrEMBL:G8E841,TrEMBL:G8E842,TrEMBL:Q941Q8;Derives_from=GSCOCT00033980001;Name=Cc11_g03790;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1A-6,CC_functional_completeness:fragment,CC_gene:R1A-6,CC_gene:R1A-10,CC_gene:R1B-17;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033980001~ Putative late blight resistance protein homolog R1A-6~ R1A-6~ fragment;original_location=complement(1025858..1026799);owner=coffea | |
| 58151 chr11 manual_curation exon 15691634 15692575 . - . Parent=GSCOCT00033980001 | |
| 58152 chr11 manual_curation CDS 15691634 15692575 . - 0 Parent=GSCOCT00033980001 | |
| 58153 chr11 manual_curation gene 15697094 15700960 . - . ID=GSCOCG00033981001;Name=Cc11_g03800 | |
| 58154 chr11 manual_curation mRNA 15697094 15700960 . - . ID=GSCOCT00033981001;Parent=GSCOCG00033981001;Name=Cc11_g03800 | |
| 58155 chr11 manual_curation polypeptide 15697094 15700960 . - . ID=GSCOCP00033981001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,InterPro:IPR021929,PFAM:PF00931,PFAM:PF12061,PRINTS:PR00364,SwissProt:Q6L3Z4,SwissProt:Q6L3Z7,SwissProt:Q6L403,TAIR:AT1G59780.1,TAIR:AT3G46530.1,TAIR:AT5G35450.1,TrEMBL:Q96485,TrEMBL:Q9LLD0,TrEMBL:Q9LLD4;Derives_from=GSCOCT00033981001;Name=Cc11_g03800;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1B-14,CC_functional_completeness:complete,CC_gene:R1B-14,CC_gene:R1B-17,CC_gene:R1B-12;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033981001~ Putative late blight resistance protein homolog R1B-14~ R1B-14~ complete;original_location=complement(1031318..1035184);owner=coffea | |
| 58156 chr11 manual_curation exon 15697094 15700960 . - . Parent=GSCOCT00033981001 | |
| 58157 chr11 manual_curation CDS 15697094 15700960 . - 0 Parent=GSCOCT00033981001 | |
| 58158 chr11 manual_curation gene 15702388 15703798 . - . ID=GSCOCG00033983001;Name=Cc11_g03810 | |
| 58159 chr11 manual_curation mRNA 15702388 15703798 . - . ID=GSCOCT00033983001;Parent=GSCOCG00033983001;Name=Cc11_g03810 | |
| 58160 chr11 manual_curation polypeptide 15702476 15702893 . - . ID=GSCOCP00033983001;Derives_from=GSCOCT00033983001;Name=Cc11_g03810;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033983001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1037096..1037117%2C1036956..1037031%2C1036700..1036871));owner=coffea | |
| 58161 chr11 manual_curation exon 15702388 15702647 . - . Parent=GSCOCT00033983001 | |
| 58162 chr11 manual_curation exon 15702732 15702807 . - . Parent=GSCOCT00033983001 | |
| 58163 chr11 manual_curation exon 15702872 15703798 . - . Parent=GSCOCT00033983001 | |
| 58164 chr11 manual_curation CDS 15702476 15702647 . - 2 Parent=GSCOCT00033983001 | |
| 58165 chr11 manual_curation CDS 15702732 15702807 . - 1 Parent=GSCOCT00033983001 | |
| 58166 chr11 manual_curation CDS 15702872 15702893 . - 0 Parent=GSCOCT00033983001 | |
| 58167 chr11 manual_curation gene 15738985 15739637 . + . ID=GSCOCG00033988001;Name=Cc11_g03820 | |
| 58168 chr11 manual_curation mRNA 15738985 15739637 . + . ID=GSCOCT00033988001;Parent=GSCOCG00033988001;Name=Cc11_g03820 | |
| 58169 chr11 manual_curation polypeptide 15738985 15739637 . + . ID=GSCOCP00033988001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:O04491,SwissProt:Q8RWS8,SwissProt:Q9FIX3,TAIR:AT1G09680.1,TAIR:AT2G41720.1,TAIR:AT5G39710.1,TIGRFAMs:TIGR00756,TrEMBL:B9H9T6,TrEMBL:D7THV9,TrEMBL:I1JNC4;Derives_from=GSCOCT00033988001;Name=Cc11_g03820;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Pentatricopeptide repeat-containing protein At2g41720,CC_functional_completeness:fragment,CC_gene:EMB2654,CC_gene:EMB2745,CC_gene:At1g09680;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033988001~ Putative Pentatricopeptide repeat-containing protein At2g41720~ EMB2654~ fragment;original_location=join(1073209..1073463%2C1073577..1073682%2C1073779..1073861);owner=coffea | |
| 58170 chr11 manual_curation exon 15738985 15739239 . + . Parent=GSCOCT00033988001 | |
| 58171 chr11 manual_curation exon 15739353 15739458 . + . Parent=GSCOCT00033988001 | |
| 58172 chr11 manual_curation exon 15739555 15739637 . + . Parent=GSCOCT00033988001 | |
| 58173 chr11 manual_curation CDS 15738985 15739239 . + 0 Parent=GSCOCT00033988001 | |
| 58174 chr11 manual_curation CDS 15739353 15739458 . + 0 Parent=GSCOCT00033988001 | |
| 58175 chr11 manual_curation CDS 15739555 15739637 . + 1 Parent=GSCOCT00033988001 | |
| 58176 chr11 manual_curation gene 15739689 15744919 . + . ID=GSCOCG00033989001;Name=Cc11_g03830 | |
| 58177 chr11 manual_curation mRNA 15739689 15744919 . + . ID=GSCOCT00033989001;Parent=GSCOCG00033989001;Name=Cc11_g03830 | |
| 58178 chr11 manual_curation polypeptide 15739689 15744061 . + . ID=GSCOCP00033989001;Dbxref=InterPro:IPR002933,InterPro:IPR011650,PFAM:PF01546,PFAM:PF07687,SUPERFAMILY:SSF55031,SwissProt:P54638,SwissProt:Q4USS4,SwissProt:Q8PAU0,TAIR:AT4G17830.2,TrEMBL:B9N2N6,TrEMBL:C4P7K7,TrEMBL:D7MDE1;Derives_from=GSCOCT00033989001;Name=Cc11_g03830;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008152,GO:0016787,CC_EC_number:3.5.1.16,PRODUCT:Acetylornithine deacetylase,CC_functional_completeness:fragment,CC_gene:argE,CC_gene:dapE;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033989001~ Acetylornithine deacetylase~ argE~ fragment;original_location=join(1073913..1073951%2C1074931..1075175%2C1075281..1075389%2C1075897..1076035%2C1076142..1076199%2C1076278..1076295%2C1076520..1076642%2C1077539..1077692%2C1077760..1077793%2C1078164..1078285);owner=coffea | |
| 58179 chr11 manual_curation exon 15739689 15739727 . + . Parent=GSCOCT00033989001 | |
| 58180 chr11 manual_curation exon 15740707 15740951 . + . Parent=GSCOCT00033989001 | |
| 58181 chr11 manual_curation exon 15741057 15741165 . + . Parent=GSCOCT00033989001 | |
| 58182 chr11 manual_curation exon 15741673 15741811 . + . Parent=GSCOCT00033989001 | |
| 58183 chr11 manual_curation exon 15741918 15741975 . + . Parent=GSCOCT00033989001 | |
| 58184 chr11 manual_curation exon 15742054 15742071 . + . Parent=GSCOCT00033989001 | |
| 58185 chr11 manual_curation exon 15742296 15742418 . + . Parent=GSCOCT00033989001 | |
| 58186 chr11 manual_curation exon 15743315 15743468 . + . Parent=GSCOCT00033989001 | |
| 58187 chr11 manual_curation exon 15743536 15743569 . + . Parent=GSCOCT00033989001 | |
| 58188 chr11 manual_curation exon 15743940 15744919 . + . Parent=GSCOCT00033989001 | |
| 58189 chr11 manual_curation CDS 15739689 15739727 . + 0 Parent=GSCOCT00033989001 | |
| 58190 chr11 manual_curation CDS 15740707 15740951 . + 0 Parent=GSCOCT00033989001 | |
| 58191 chr11 manual_curation CDS 15741057 15741165 . + 2 Parent=GSCOCT00033989001 | |
| 58192 chr11 manual_curation CDS 15741673 15741811 . + 0 Parent=GSCOCT00033989001 | |
| 58193 chr11 manual_curation CDS 15741918 15741975 . + 1 Parent=GSCOCT00033989001 | |
| 58194 chr11 manual_curation CDS 15742054 15742071 . + 2 Parent=GSCOCT00033989001 | |
| 58195 chr11 manual_curation CDS 15742296 15742418 . + 2 Parent=GSCOCT00033989001 | |
| 58196 chr11 manual_curation CDS 15743315 15743468 . + 2 Parent=GSCOCT00033989001 | |
| 58197 chr11 manual_curation CDS 15743536 15743569 . + 0 Parent=GSCOCT00033989001 | |
| 58198 chr11 manual_curation CDS 15743940 15744061 . + 1 Parent=GSCOCT00033989001 | |
| 58199 chr11 manual_curation gene 15760986 15765377 . - . ID=GSCOCG00033992001;Name=Cc11_g03840 | |
| 58200 chr11 manual_curation mRNA 15760986 15765377 . - . ID=GSCOCT00033992001;Parent=GSCOCG00033992001;Name=Cc11_g03840 | |
| 58201 chr11 manual_curation polypeptide 15762255 15765377 . - . ID=GSCOCP00033992001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,InterPro:IPR021929,PFAM:PF00931,PFAM:PF12061,PRINTS:PR00364,SwissProt:Q6L3Z7,SwissProt:Q6L403,SwissProt:Q6L438,TAIR:AT1G53350.1,TAIR:AT1G59780.1,TAIR:AT5G35450.1,TrEMBL:Q96485,TrEMBL:Q9LLD0,TrEMBL:Q9LLD4;Derives_from=GSCOCT00033992001;Name=Cc11_g03840;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1B-14,CC_functional_completeness:fragment,CC_gene:R1B-14,CC_gene:R1B-17,CC_gene:R1A-6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033992001~ Putative late blight resistance protein homolog R1B-14~ R1B-14~ fragment;original_location=complement(1096479..1099601);owner=coffea | |
| 58202 chr11 manual_curation exon 15760986 15761093 . - . Parent=GSCOCT00033992001 | |
| 58203 chr11 manual_curation exon 15762036 15762081 . - . Parent=GSCOCT00033992001 | |
| 58204 chr11 manual_curation exon 15762254 15765377 . - . Parent=GSCOCT00033992001 | |
| 58205 chr11 manual_curation CDS 15762255 15765377 . - 0 Parent=GSCOCT00033992001 | |
| 58206 chr11 manual_curation gene 15781583 15784402 . - . ID=GSCOCG00033994001;Name=Cc11_g03850 | |
| 58207 chr11 manual_curation mRNA 15781583 15784402 . - . ID=GSCOCT00033994001;Parent=GSCOCG00033994001;Name=Cc11_g03850 | |
| 58208 chr11 manual_curation polypeptide 15781964 15784048 . - . ID=GSCOCP00033994001;Dbxref=SwissProt:P24805,TAIR:AT3G22850.1,TAIR:AT5G19140.1,TAIR:AT5G43830.1,TrEMBL:A9PEF3,TrEMBL:Q5MCR8,TrEMBL:Q94KH9;Derives_from=GSCOCT00033994001;Name=Cc11_g03850;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:TSJT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033994001~ Hypothetical protein~ TSJT1~ missing_functional_completeness;original_location=complement(join(1118193..1118272%2C1118040..1118093%2C1116986..1117226%2C1116783..1116894%2C1116483..1116592%2C1116188..1116223));owner=coffea | |
| 58209 chr11 manual_curation exon 15781583 15781999 . - . Parent=GSCOCT00033994001 | |
| 58210 chr11 manual_curation exon 15782259 15782368 . - . Parent=GSCOCT00033994001 | |
| 58211 chr11 manual_curation exon 15782559 15782670 . - . Parent=GSCOCT00033994001 | |
| 58212 chr11 manual_curation exon 15782762 15783002 . - . Parent=GSCOCT00033994001 | |
| 58213 chr11 manual_curation exon 15783816 15783869 . - . Parent=GSCOCT00033994001 | |
| 58214 chr11 manual_curation exon 15783969 15784402 . - . Parent=GSCOCT00033994001 | |
| 58215 chr11 manual_curation CDS 15781964 15781999 . - 0 Parent=GSCOCT00033994001 | |
| 58216 chr11 manual_curation CDS 15782259 15782368 . - 1 Parent=GSCOCT00033994001 | |
| 58217 chr11 manual_curation CDS 15782559 15782670 . - 0 Parent=GSCOCT00033994001 | |
| 58218 chr11 manual_curation CDS 15782762 15783002 . - 2 Parent=GSCOCT00033994001 | |
| 58219 chr11 manual_curation CDS 15783816 15783869 . - 2 Parent=GSCOCT00033994001 | |
| 58220 chr11 manual_curation CDS 15783969 15784048 . - 0 Parent=GSCOCT00033994001 | |
| 58221 chr11 manual_curation gene 15913088 15916405 . - . ID=GSCOCG00033995001;Name=Cc11_g03860 | |
| 58222 chr11 manual_curation mRNA 15913088 15916405 . - . ID=GSCOCT00033995001;Parent=GSCOCG00033995001;Name=Cc11_g03860 | |
| 58223 chr11 manual_curation polypeptide 15914087 15916405 . - . ID=GSCOCP00033995001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q6L3Z4,SwissProt:Q6L3Z7,SwissProt:Q6L403,TAIR:AT1G59780.1,TAIR:AT3G46530.1,TAIR:AT5G35450.1,TrEMBL:Q96485,TrEMBL:Q9LLD0,TrEMBL:Q9LLD4;Derives_from=GSCOCT00033995001;Name=Cc11_g03860;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1B-14,CC_functional_completeness:fragment,CC_gene:R1B-14,CC_gene:R1B-17,CC_gene:R1B-12;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033995001~ Putative late blight resistance protein homolog R1B-14~ R1B-14~ fragment;original_location=complement(1248311..1250629);owner=coffea | |
| 58224 chr11 manual_curation exon 15913088 15916405 . - . Parent=GSCOCT00033995001 | |
| 58225 chr11 manual_curation CDS 15914087 15916405 . - 0 Parent=GSCOCT00033995001 | |
| 58226 chr11 manual_curation gene 15919289 15921484 . - . ID=GSCOCG00033996001;Name=Cc11_g03870 | |
| 58227 chr11 manual_curation mRNA 15919289 15921484 . - . ID=GSCOCT00033996001;Parent=GSCOCG00033996001;Name=Cc11_g03870 | |
| 58228 chr11 manual_curation polypeptide 15919289 15920470 . - . ID=GSCOCP00033996001;Dbxref=GENE3D:G3DSA:3.20.20.190,InterPro:IPR004129,InterPro:IPR017946,PANTHER:PTHR23344,PFAM:PF03009,SUPERFAMILY:SSF51695,SwissProt:P09394,SwissProt:Q06282,SwissProt:Q7Y208,TAIR:AT1G74210.1,TAIR:AT5G08030.1,TAIR:AT5G58170.1,TrEMBL:B9N052,TrEMBL:D7SHZ8,TrEMBL:G0TEB3;Derives_from=GSCOCT00033996001;Name=Cc11_g03870;Ontology_term=CC_evidence_code:ISS,GO:0006071,GO:0006629,GO:0008081,GO:0008889,CC_EC_number:3.1.4.46,CC_EC_number:3.1.4.46,PRODUCT:Putative Glycerophosphoryl diester phosphodiesterase,CC_functional_completeness:modules,CC_gene:glpQ,CC_gene:GPDL3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033996001~ Putative Glycerophosphoryl diester phosphodiesterase~ glpQ~ modules;original_location=complement(1253513..1254694);owner=coffea | |
| 58229 chr11 manual_curation exon 15921265 15921340 . - . Parent=GSCOCT00033996001 | |
| 58230 chr11 manual_curation exon 15921424 15921484 . - . Parent=GSCOCT00033996001 | |
| 58231 chr11 manual_curation exon 15919289 15921180 . - . Parent=GSCOCT00033996001 | |
| 58232 chr11 manual_curation CDS 15919289 15920470 . - 0 Parent=GSCOCT00033996001 | |
| 58233 chr11 manual_curation gene 15948621 15950724 . + . ID=GSCOCG00033997001;Name=Cc11_g03880 | |
| 58234 chr11 manual_curation mRNA 15948621 15950724 . + . ID=GSCOCT00033997001;Parent=GSCOCG00033997001;Name=Cc11_g03880 | |
| 58235 chr11 manual_curation polypeptide 15948621 15950724 . + . ID=GSCOCP00033997001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q8L844,SwissProt:Q9FFZ2,SwissProt:Q9SZ52,TAIR:AT4G31850.1,TAIR:AT5G36300.1,TAIR:AT5G42310.1,TIGRFAMs:TIGR00756,TrEMBL:A5AVZ1,TrEMBL:B9S1X9,TrEMBL:F6HEH5;Derives_from=GSCOCT00033997001;Name=Cc11_g03880;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Pentatricopeptide repeat-containing protein At5g42310%2C mitochondrial,CC_functional_completeness:complete,CC_gene:At5g42310,CC_gene:At5g36300,CC_gene:PGR3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033997001~ Putative Pentatricopeptide repeat-containing protein At5g42310%2C mitochondrial~ At5g42310~ complete;original_location=join(1282845..1284155%2C1284243..1284417%2C1284485..1284537%2C1284820..1284948);owner=coffea | |
| 58236 chr11 manual_curation exon 15948621 15949931 . + . Parent=GSCOCT00033997001 | |
| 58237 chr11 manual_curation exon 15950019 15950193 . + . Parent=GSCOCT00033997001 | |
| 58238 chr11 manual_curation exon 15950261 15950313 . + . Parent=GSCOCT00033997001 | |
| 58239 chr11 manual_curation exon 15950596 15950724 . + . Parent=GSCOCT00033997001 | |
| 58240 chr11 manual_curation CDS 15948621 15949931 . + 0 Parent=GSCOCT00033997001 | |
| 58241 chr11 manual_curation CDS 15950019 15950193 . + 0 Parent=GSCOCT00033997001 | |
| 58242 chr11 manual_curation CDS 15950261 15950313 . + 1 Parent=GSCOCT00033997001 | |
| 58243 chr11 manual_curation CDS 15950596 15950724 . + 0 Parent=GSCOCT00033997001 | |
| 58244 chr11 manual_curation gene 15950843 15952663 . + . ID=GSCOCG00033998001;Name=Cc11_g03890 | |
| 58245 chr11 manual_curation mRNA 15950843 15952663 . + . ID=GSCOCT00033998001;Parent=GSCOCG00033998001;Name=Cc11_g03890 | |
| 58246 chr11 manual_curation polypeptide 15950843 15952663 . + . ID=GSCOCP00033998001;Dbxref=TAIR:AT5G17170.1,TrEMBL:B9IPX4,TrEMBL:B9S1Y2,TrEMBL:F6HEH3;Derives_from=GSCOCT00033998001;Name=Cc11_g03890;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Electron transporter%2C putative,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033998001~ Electron transporter%2C putative~ unknown_gene~ fragment;original_location=join(1285067..1285192%2C1285382..1285398%2C1285541..1285599%2C1285710..1285890%2C1286788..1286887);owner=coffea | |
| 58247 chr11 manual_curation exon 15950843 15950968 . + . Parent=GSCOCT00033998001 | |
| 58248 chr11 manual_curation exon 15951158 15951174 . + . Parent=GSCOCT00033998001 | |
| 58249 chr11 manual_curation exon 15951317 15951375 . + . Parent=GSCOCT00033998001 | |
| 58250 chr11 manual_curation exon 15951486 15951666 . + . Parent=GSCOCT00033998001 | |
| 58251 chr11 manual_curation exon 15952564 15952663 . + . Parent=GSCOCT00033998001 | |
| 58252 chr11 manual_curation CDS 15950843 15950968 . + 0 Parent=GSCOCT00033998001 | |
| 58253 chr11 manual_curation CDS 15951158 15951174 . + 0 Parent=GSCOCT00033998001 | |
| 58254 chr11 manual_curation CDS 15951317 15951375 . + 2 Parent=GSCOCT00033998001 | |
| 58255 chr11 manual_curation CDS 15951486 15951666 . + 1 Parent=GSCOCT00033998001 | |
| 58256 chr11 manual_curation CDS 15952564 15952663 . + 2 Parent=GSCOCT00033998001 | |
| 58257 chr11 manual_curation gene 15956504 15961985 . - . ID=GSCOCG00033999001;Name=Cc11_g03900 | |
| 58258 chr11 manual_curation mRNA 15956504 15961985 . - . ID=GSCOCT00033999001;Parent=GSCOCG00033999001;Name=Cc11_g03900 | |
| 58259 chr11 manual_curation polypeptide 15957238 15960721 . - . ID=GSCOCP00033999001;Derives_from=GSCOCT00033999001;Name=Cc11_g03900;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00033999001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1294936..1294945%2C1294290..1294339%2C1291462..1291596));owner=coffea | |
| 58260 chr11 manual_curation exon 15960994 15961055 . - . Parent=GSCOCT00033999001 | |
| 58261 chr11 manual_curation exon 15961559 15961665 . - . Parent=GSCOCT00033999001 | |
| 58262 chr11 manual_curation exon 15961903 15961985 . - . Parent=GSCOCT00033999001 | |
| 58263 chr11 manual_curation exon 15956504 15957372 . - . Parent=GSCOCT00033999001 | |
| 58264 chr11 manual_curation exon 15960066 15960115 . - . Parent=GSCOCT00033999001 | |
| 58265 chr11 manual_curation exon 15960712 15960839 . - . Parent=GSCOCT00033999001 | |
| 58266 chr11 manual_curation CDS 15957238 15957372 . - 0 Parent=GSCOCT00033999001 | |
| 58267 chr11 manual_curation CDS 15960066 15960115 . - 1 Parent=GSCOCT00033999001 | |
| 58268 chr11 manual_curation CDS 15960712 15960721 . - 0 Parent=GSCOCT00033999001 | |
| 58269 chr11 manual_curation gene 15962528 15967710 . - . ID=GSCOCG00034000001;Name=Cc11_g03910 | |
| 58270 chr11 manual_curation mRNA 15962528 15967710 . - . ID=GSCOCT00034000001;Parent=GSCOCG00034000001;Name=Cc11_g03910 | |
| 58271 chr11 manual_curation polypeptide 15962528 15967710 . - . ID=GSCOCP00034000001;Dbxref=InterPro:IPR002885,InterPro:IPR018087,PFAM:PF01535,PROFILE:PS51375,PROSITE:PS00659,SwissProt:Q5G1S8,SwissProt:Q9LYZ9,SwissProt:Q9SZ52,TAIR:AT3G18110.1,TAIR:AT4G31850.1,TAIR:AT5G02860.1,TIGRFAMs:TIGR00756,TrEMBL:A5AVZ0,TrEMBL:B9S1X8,TrEMBL:F6HEH6;Derives_from=GSCOCT00034000001;Name=Cc11_g03910;Ontology_term=CC_evidence_code:ISS,GO:0005975,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At3g18110%2C chloroplastic,CC_functional_completeness:complete,CC_gene:EMB1270,CC_gene:At5g02860,CC_gene:PGR3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034000001~ Pentatricopeptide repeat-containing protein At3g18110%2C chloroplastic~ EMB1270~ complete;original_location=complement(join(1298258..1301934%2C1297940..1298140%2C1297390..1297495%2C1296752..1297297));owner=coffea | |
| 58272 chr11 manual_curation exon 15962528 15963073 . - . Parent=GSCOCT00034000001 | |
| 58273 chr11 manual_curation exon 15963166 15963271 . - . Parent=GSCOCT00034000001 | |
| 58274 chr11 manual_curation exon 15963716 15963916 . - . Parent=GSCOCT00034000001 | |
| 58275 chr11 manual_curation exon 15964034 15967710 . - . Parent=GSCOCT00034000001 | |
| 58276 chr11 manual_curation CDS 15962528 15963073 . - 0 Parent=GSCOCT00034000001 | |
| 58277 chr11 manual_curation CDS 15963166 15963271 . - 2 Parent=GSCOCT00034000001 | |
| 58278 chr11 manual_curation CDS 15963716 15963916 . - 2 Parent=GSCOCT00034000001 | |
| 58279 chr11 manual_curation CDS 15964034 15967710 . - 0 Parent=GSCOCT00034000001 | |
| 58280 chr11 manual_curation gene 15973198 15975931 . - . ID=GSCOCG00034001001;Name=Cc11_g03920 | |
| 58281 chr11 manual_curation mRNA 15973198 15975931 . - . ID=GSCOCT00034001001;Parent=GSCOCG00034001001;Name=Cc11_g03920 | |
| 58282 chr11 manual_curation polypeptide 15973198 15975931 . - . ID=GSCOCP00034001001;Dbxref=InterPro:IPR004183,PFAM:PF02900,SUPERFAMILY:SSF53213,SwissProt:P24197,SwissProt:Q7XA48,SwissProt:Q949R4,TAIR:AT4G15093.1,TrEMBL:A5BGZ7,TrEMBL:G7KNT9,TrEMBL:Q6L3J4;Derives_from=GSCOCT00034001001;Name=Cc11_g03920;Ontology_term=CC_evidence_code:ISS,GO:0006725,GO:0008198,GO:0016491,CC_EC_number:missing_EC_number,PRODUCT:4%2C5-DOPA dioxygenase extradiol-like protein,CC_functional_completeness:modules,CC_gene:At4g15093,CC_gene:DODA,CC_gene:ygiD;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034001001~ 4%2C5-DOPA dioxygenase extradiol-like protein~ At4g15093~ modules;original_location=complement(join(1309817..1310155%2C1308415..1308779%2C1308040..1308079%2C1307422..1307814));owner=coffea | |
| 58283 chr11 manual_curation exon 15973198 15973590 . - . Parent=GSCOCT00034001001 | |
| 58284 chr11 manual_curation exon 15973816 15973855 . - . Parent=GSCOCT00034001001 | |
| 58285 chr11 manual_curation exon 15974191 15974555 . - . Parent=GSCOCT00034001001 | |
| 58286 chr11 manual_curation exon 15975593 15975931 . - . Parent=GSCOCT00034001001 | |
| 58287 chr11 manual_curation CDS 15973198 15973590 . - 0 Parent=GSCOCT00034001001 | |
| 58288 chr11 manual_curation CDS 15973816 15973855 . - 2 Parent=GSCOCT00034001001 | |
| 58289 chr11 manual_curation CDS 15974191 15974555 . - 0 Parent=GSCOCT00034001001 | |
| 58290 chr11 manual_curation CDS 15975593 15975931 . - 0 Parent=GSCOCT00034001001 | |
| 58291 chr11 manual_curation gene 16001633 16002946 . + . ID=GSCOCG00034002001;Name=Cc11_g03930 | |
| 58292 chr11 manual_curation mRNA 16001633 16002946 . + . ID=GSCOCT00034002001;Parent=GSCOCG00034002001;Name=Cc11_g03930 | |
| 58293 chr11 manual_curation polypeptide 16001633 16002946 . + . ID=GSCOCP00034002001;Dbxref=InterPro:IPR000073,PRINTS:PR00111,TAIR:AT1G13820.1,TAIR:AT5G39220.1,TrEMBL:B9H0K3,TrEMBL:F6H497,TrEMBL:G7JHI3;Derives_from=GSCOCT00034002001;Name=Cc11_g03930;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:alpha/beta-Hydrolases superfamily protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034002001~ alpha/beta-Hydrolases superfamily protein~ unknown_gene~ fragment;original_location=join(1335857..1336018%2C1336361..1336455%2C1336621..1336718%2C1336837..1336886%2C1337027..1337170);owner=coffea | |
| 58294 chr11 manual_curation exon 16001633 16001794 . + . Parent=GSCOCT00034002001 | |
| 58295 chr11 manual_curation exon 16002137 16002231 . + . Parent=GSCOCT00034002001 | |
| 58296 chr11 manual_curation exon 16002397 16002494 . + . Parent=GSCOCT00034002001 | |
| 58297 chr11 manual_curation exon 16002613 16002662 . + . Parent=GSCOCT00034002001 | |
| 58298 chr11 manual_curation exon 16002803 16002946 . + . Parent=GSCOCT00034002001 | |
| 58299 chr11 manual_curation CDS 16001633 16001794 . + 0 Parent=GSCOCT00034002001 | |
| 58300 chr11 manual_curation CDS 16002137 16002231 . + 0 Parent=GSCOCT00034002001 | |
| 58301 chr11 manual_curation CDS 16002397 16002494 . + 2 Parent=GSCOCT00034002001 | |
| 58302 chr11 manual_curation CDS 16002613 16002662 . + 1 Parent=GSCOCT00034002001 | |
| 58303 chr11 manual_curation CDS 16002803 16002946 . + 0 Parent=GSCOCT00034002001 | |
| 58304 chr11 manual_curation gene 16016504 16019990 . + . ID=GSCOCG00034003001;Name=Cc11_g03940 | |
| 58305 chr11 manual_curation mRNA 16016504 16019990 . + . ID=GSCOCT00034003001;Parent=GSCOCG00034003001;Name=Cc11_g03940 | |
| 58306 chr11 manual_curation polypeptide 16016504 16019922 . + . ID=GSCOCP00034003001;Dbxref=InterPro:IPR000073,PFAM:PF00561,TAIR:AT1G13820.1,TAIR:AT5G39220.1,TrEMBL:B9HXJ7,TrEMBL:D7T9W1,TrEMBL:G7JHI3;Derives_from=GSCOCT00034003001;Name=Cc11_g03940;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034003001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=join(1350728..1350766%2C1350876..1351112%2C1351827..1351919%2C1352059..1352154%2C1352889..1352954%2C1353952..1354146);owner=coffea | |
| 58307 chr11 manual_curation exon 16016504 16016542 . + . Parent=GSCOCT00034003001 | |
| 58308 chr11 manual_curation exon 16016652 16016888 . + . Parent=GSCOCT00034003001 | |
| 58309 chr11 manual_curation exon 16017603 16017695 . + . Parent=GSCOCT00034003001 | |
| 58310 chr11 manual_curation exon 16017835 16017930 . + . Parent=GSCOCT00034003001 | |
| 58311 chr11 manual_curation exon 16018665 16018730 . + . Parent=GSCOCT00034003001 | |
| 58312 chr11 manual_curation exon 16019728 16019990 . + . Parent=GSCOCT00034003001 | |
| 58313 chr11 manual_curation CDS 16016504 16016542 . + 0 Parent=GSCOCT00034003001 | |
| 58314 chr11 manual_curation CDS 16016652 16016888 . + 0 Parent=GSCOCT00034003001 | |
| 58315 chr11 manual_curation CDS 16017603 16017695 . + 0 Parent=GSCOCT00034003001 | |
| 58316 chr11 manual_curation CDS 16017835 16017930 . + 0 Parent=GSCOCT00034003001 | |
| 58317 chr11 manual_curation CDS 16018665 16018730 . + 0 Parent=GSCOCT00034003001 | |
| 58318 chr11 manual_curation CDS 16019728 16019922 . + 0 Parent=GSCOCT00034003001 | |
| 58319 chr11 manual_curation gene 16023802 16135766 . - . ID=GSCOCG00034004001;Name=Cc11_g03950 | |
| 58320 chr11 manual_curation mRNA 16023802 16135766 . - . ID=GSCOCT00034004001;Parent=GSCOCG00034004001;Name=Cc11_g03950 | |
| 58321 chr11 manual_curation polypeptide 16023802 16135639 . - . ID=GSCOCP00034004001;Dbxref=GENE3D:G3DSA:1.25.40.20,InterPro:IPR002110,InterPro:IPR020683,PROFILE:PS50088,PROFILE:PS50297,SMART:SM00248,SUPERFAMILY:SSF48403,SwissProt:Q6AWW5,SwissProt:Q92625,SwissProt:Q9C7A2,TAIR:AT4G10720.1,TAIR:AT5G15500.2,TAIR:AT5G51160.1,TrEMBL:B9HDA6,TrEMBL:F8WLA1,TrEMBL:F8WLB2;Derives_from=GSCOCT00034004001;Name=Cc11_g03950;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Ankyrin repeat family protein,CC_functional_completeness:complete,CC_gene:At3g12360,CC_gene:At5g02620,CC_gene:ANKS1A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034004001~ Putative Ankyrin repeat family protein~ At3g12360~ complete;original_location=complement(join(1469390..1469863%2C1467883..1468444%2C1358026..1358276));owner=coffea | |
| 58322 chr11 manual_curation exon 16023802 16024052 . - . Parent=GSCOCT00034004001 | |
| 58323 chr11 manual_curation exon 16133659 16134220 . - . Parent=GSCOCT00034004001 | |
| 58324 chr11 manual_curation exon 16135166 16135766 . - . Parent=GSCOCT00034004001 | |
| 58325 chr11 manual_curation CDS 16023802 16024052 . - 1 Parent=GSCOCT00034004001 | |
| 58326 chr11 manual_curation CDS 16133659 16134220 . - 0 Parent=GSCOCT00034004001 | |
| 58327 chr11 manual_curation CDS 16135166 16135639 . - 0 Parent=GSCOCT00034004001 | |
| 58328 chr11 manual_curation gene 16188485 16193686 . + . ID=GSCOCG00034009001;Name=Cc11_g03960 | |
| 58329 chr11 manual_curation mRNA 16188485 16193686 . + . ID=GSCOCT00034009001;Parent=GSCOCG00034009001;Name=Cc11_g03960 | |
| 58330 chr11 manual_curation polypeptide 16189510 16193388 . + . ID=GSCOCP00034009001;Dbxref=InterPro:IPR002921,PFAM:PF01764,SwissProt:P19515,SwissProt:P61871,SwissProt:P61872,TAIR:AT5G18630.1,TAIR:AT5G18640.1,TrEMBL:A9P9L1,TrEMBL:B9HSE7,TrEMBL:F6HDH0;Derives_from=GSCOCT00034009001;Name=Cc11_g03960;Ontology_term=CC_evidence_code:ISS,GO:0004806,GO:0006629,CC_EC_number:3.1.1.3,PRODUCT:alpha/beta-Hydrolases superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034009001~ alpha/beta-Hydrolases superfamily protein~ unknown_gene~ complete;original_location=join(1523734..1523803%2C1524482..1524567%2C1524737..1524802%2C1524946..1524993%2C1525187..1525254%2C1525776..1525848%2C1525936..1526097%2C1526674..1526868%2C1527015..1527103%2C1527399..1527612);owner=coffea | |
| 58331 chr11 manual_curation exon 16188485 16189579 . + . Parent=GSCOCT00034009001 | |
| 58332 chr11 manual_curation exon 16190258 16190343 . + . Parent=GSCOCT00034009001 | |
| 58333 chr11 manual_curation exon 16190513 16190578 . + . Parent=GSCOCT00034009001 | |
| 58334 chr11 manual_curation exon 16190722 16190769 . + . Parent=GSCOCT00034009001 | |
| 58335 chr11 manual_curation exon 16190963 16191030 . + . Parent=GSCOCT00034009001 | |
| 58336 chr11 manual_curation exon 16191552 16191624 . + . Parent=GSCOCT00034009001 | |
| 58337 chr11 manual_curation exon 16191712 16191873 . + . Parent=GSCOCT00034009001 | |
| 58338 chr11 manual_curation exon 16192450 16192644 . + . Parent=GSCOCT00034009001 | |
| 58339 chr11 manual_curation exon 16192791 16192879 . + . Parent=GSCOCT00034009001 | |
| 58340 chr11 manual_curation exon 16193175 16193686 . + . Parent=GSCOCT00034009001 | |
| 58341 chr11 manual_curation CDS 16189510 16189579 . + 0 Parent=GSCOCT00034009001 | |
| 58342 chr11 manual_curation CDS 16190258 16190343 . + 1 Parent=GSCOCT00034009001 | |
| 58343 chr11 manual_curation CDS 16190513 16190578 . + 0 Parent=GSCOCT00034009001 | |
| 58344 chr11 manual_curation CDS 16190722 16190769 . + 0 Parent=GSCOCT00034009001 | |
| 58345 chr11 manual_curation CDS 16190963 16191030 . + 0 Parent=GSCOCT00034009001 | |
| 58346 chr11 manual_curation CDS 16191552 16191624 . + 2 Parent=GSCOCT00034009001 | |
| 58347 chr11 manual_curation CDS 16191712 16191873 . + 0 Parent=GSCOCT00034009001 | |
| 58348 chr11 manual_curation CDS 16192450 16192644 . + 0 Parent=GSCOCT00034009001 | |
| 58349 chr11 manual_curation CDS 16192791 16192879 . + 0 Parent=GSCOCT00034009001 | |
| 58350 chr11 manual_curation CDS 16193175 16193388 . + 2 Parent=GSCOCT00034009001 | |
| 58351 chr11 manual_curation gene 16215589 16218697 . - . ID=GSCOCG00034011001;Name=Cc11_g03970 | |
| 58352 chr11 manual_curation mRNA 16215589 16218697 . - . ID=GSCOCT00034011001;Parent=GSCOCG00034011001;Name=Cc11_g03970 | |
| 58353 chr11 manual_curation polypeptide 16215589 16218697 . - . ID=GSCOCP00034011001;Dbxref=TAIR:AT3G14980.1,TAIR:AT5G36670.1,TAIR:AT5G36740.1,TrEMBL:A5BK01,TrEMBL:B9SE60,TrEMBL:I1M321;Derives_from=GSCOCT00034011001;Name=Cc11_g03970;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034011001~ Putative Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein~ unknown_gene~ fragment;original_location=complement(join(1552862..1552921%2C1552586..1552761%2C1552223..1552242%2C1551758..1551801%2C1550929..1551173%2C1550290..1550376%2C1549813..1549843));owner=coffea | |
| 58354 chr11 manual_curation exon 16215589 16215619 . - . Parent=GSCOCT00034011001 | |
| 58355 chr11 manual_curation exon 16216066 16216152 . - . Parent=GSCOCT00034011001 | |
| 58356 chr11 manual_curation exon 16216705 16216949 . - . Parent=GSCOCT00034011001 | |
| 58357 chr11 manual_curation exon 16217534 16217577 . - . Parent=GSCOCT00034011001 | |
| 58358 chr11 manual_curation exon 16217999 16218018 . - . Parent=GSCOCT00034011001 | |
| 58359 chr11 manual_curation exon 16218362 16218537 . - . Parent=GSCOCT00034011001 | |
| 58360 chr11 manual_curation exon 16218638 16218697 . - . Parent=GSCOCT00034011001 | |
| 58361 chr11 manual_curation CDS 16215589 16215619 . - 2 Parent=GSCOCT00034011001 | |
| 58362 chr11 manual_curation CDS 16216066 16216152 . - 2 Parent=GSCOCT00034011001 | |
| 58363 chr11 manual_curation CDS 16216705 16216949 . - 0 Parent=GSCOCT00034011001 | |
| 58364 chr11 manual_curation CDS 16217534 16217577 . - 1 Parent=GSCOCT00034011001 | |
| 58365 chr11 manual_curation CDS 16217999 16218018 . - 2 Parent=GSCOCT00034011001 | |
| 58366 chr11 manual_curation CDS 16218362 16218537 . - 0 Parent=GSCOCT00034011001 | |
| 58367 chr11 manual_curation CDS 16218638 16218697 . - 0 Parent=GSCOCT00034011001 | |
| 58368 chr11 manual_curation gene 16230202 16231140 . - . ID=GSCOCG00034012001;Name=Cc11_g03980 | |
| 58369 chr11 manual_curation mRNA 16230202 16231140 . - . ID=GSCOCT00034012001;Parent=GSCOCG00034012001;Name=Cc11_g03980 | |
| 58370 chr11 manual_curation polypeptide 16230202 16231140 . - . ID=GSCOCP00034012001;Dbxref=InterPro:IPR002143,PFAM:PF00687,SUPERFAMILY:SSF56808,SwissProt:A4FV97,SwissProt:O76021,SwissProt:Q5RCE6,TAIR:AT1G06380.1,TAIR:AT2G42650.1,TAIR:AT3G58660.1,TrEMBL:G7IGY3,TrEMBL:I1KU61,TrEMBL:I1MJ53;Derives_from=GSCOCT00034012001;Name=Cc11_g03980;Ontology_term=CC_evidence_code:ISS,GO:0003723,GO:0006396,CC_EC_number:missing_EC_number,PRODUCT:Putative Ribosomal L1 domain-containing protein 1,CC_functional_completeness:fragment,CC_gene:RSL1D1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034012001~ Putative Ribosomal L1 domain-containing protein 1~ RSL1D1~ fragment;original_location=complement(1564426..1565364);owner=coffea | |
| 58371 chr11 manual_curation exon 16230202 16231140 . - . Parent=GSCOCT00034012001 | |
| 58372 chr11 manual_curation CDS 16230202 16231140 . - 0 Parent=GSCOCT00034012001 | |
| 58373 chr11 manual_curation gene 16250139 16252844 . - . ID=GSCOCG00034015001;Name=Cc11_g03990 | |
| 58374 chr11 manual_curation mRNA 16250139 16252844 . - . ID=GSCOCT00034015001;Parent=GSCOCG00034015001;Name=Cc11_g03990 | |
| 58375 chr11 manual_curation polypeptide 16250139 16252844 . - . ID=GSCOCP00034015001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q8W4J9,SwissProt:Q9FJB5,SwissProt:Q9FJK8,TAIR:AT5G35450.1,TAIR:AT5G43470.1,TAIR:AT5G48620.1,TrEMBL:B9GY55,TrEMBL:B9NHG2,TrEMBL:F6I146;Derives_from=GSCOCT00034015001;Name=Cc11_g03990;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative Disease resistance protein RPP8,CC_functional_completeness:complete,CC_gene:RPP8,CC_gene:RPP8L3,CC_gene:RPP8L4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034015001~ Putative Disease resistance protein RPP8~ RPP8~ complete;original_location=complement(1584363..1587068);owner=coffea | |
| 58376 chr11 manual_curation exon 16250139 16252844 . - . Parent=GSCOCT00034015001 | |
| 58377 chr11 manual_curation CDS 16250139 16252844 . - 0 Parent=GSCOCT00034015001 | |
| 58378 chr11 manual_curation gene 16290814 16291955 . - . ID=GSCOCG00034018001;Name=Cc11_g04000 | |
| 58379 chr11 manual_curation mRNA 16290814 16291955 . - . ID=GSCOCT00034018001;Parent=GSCOCG00034018001;Name=Cc11_g04000 | |
| 58380 chr11 manual_curation polypeptide 16290814 16291955 . - . ID=GSCOCP00034018001;Dbxref=GENE3D:G3DSA:3.40.640.10,InterPro:IPR004839,InterPro:IPR015421,InterPro:IPR015424,PFAM:PF00155,SUPERFAMILY:SSF53383,SwissProt:Q58FK9,SwissProt:Q71RI9,SwissProt:Q7T3E5,TAIR:AT1G77670.1,TAIR:AT2G22250.2,TrEMBL:B9RJ63,TrEMBL:E0CR92,TrEMBL:I1JZ89;Derives_from=GSCOCT00034018001;Name=Cc11_g04000;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0009058,GO:0030170,CC_EC_number:2.6.1.1,PRODUCT:Putative Kynurenine--oxoglutarate transaminase 3,CC_functional_completeness:fragment,CC_gene:ccbl2,CC_gene:Ccbl2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034018001~ Putative Kynurenine--oxoglutarate transaminase 3~ ccbl2~ fragment;original_location=complement(join(1625966..1626179%2C1625038..1625312));owner=coffea | |
| 58381 chr11 manual_curation exon 16290814 16291088 . - . Parent=GSCOCT00034018001 | |
| 58382 chr11 manual_curation exon 16291742 16291955 . - . Parent=GSCOCT00034018001 | |
| 58383 chr11 manual_curation CDS 16290814 16291088 . - 1 Parent=GSCOCT00034018001 | |
| 58384 chr11 manual_curation CDS 16291742 16291955 . - 0 Parent=GSCOCT00034018001 | |
| 58385 chr11 manual_curation gene 16302173 16304709 . - . ID=GSCOCG00034021001;Name=Cc11_g04010 | |
| 58386 chr11 manual_curation mRNA 16302173 16304709 . - . ID=GSCOCT00034021001;Parent=GSCOCG00034021001;Name=Cc11_g04010 | |
| 58387 chr11 manual_curation polypeptide 16302173 16304709 . - . ID=GSCOCP00034021001;Dbxref=SwissProt:O82799,SwissProt:Q9MAN1,TAIR:AT1G01030.1,TAIR:AT2G46870.1,TrEMBL:A5APE8,TrEMBL:B9RYX9,TrEMBL:F6HU98;Derives_from=GSCOCT00034021001;Name=Cc11_g04010;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative B3 domain-containing transcription factor NGA1,CC_functional_completeness:fragment,CC_gene:NGA1,CC_gene:NGA3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034021001~ Putative B3 domain-containing transcription factor NGA1~ NGA1~ fragment;original_location=complement(join(1638891..1638933%2C1638628..1638796%2C1636595..1636892%2C1636397..1636519));owner=coffea | |
| 58388 chr11 manual_curation exon 16302173 16302295 . - . Parent=GSCOCT00034021001 | |
| 58389 chr11 manual_curation exon 16302371 16302668 . - . Parent=GSCOCT00034021001 | |
| 58390 chr11 manual_curation exon 16304404 16304572 . - . Parent=GSCOCT00034021001 | |
| 58391 chr11 manual_curation exon 16304667 16304709 . - . Parent=GSCOCT00034021001 | |
| 58392 chr11 manual_curation CDS 16302173 16302295 . - 0 Parent=GSCOCT00034021001 | |
| 58393 chr11 manual_curation CDS 16302371 16302668 . - 2 Parent=GSCOCT00034021001 | |
| 58394 chr11 manual_curation CDS 16304404 16304572 . - 1 Parent=GSCOCT00034021001 | |
| 58395 chr11 manual_curation CDS 16304667 16304709 . - 0 Parent=GSCOCT00034021001 | |
| 58396 chr11 manual_curation gene 16319896 16325172 . - . ID=GSCOCG00034025001;Name=Cc11_g04020 | |
| 58397 chr11 manual_curation mRNA 16319896 16325172 . - . ID=GSCOCT00034025001;Parent=GSCOCG00034025001;Name=Cc11_g04020 | |
| 58398 chr11 manual_curation polypeptide 16322092 16325172 . - . ID=GSCOCP00034025001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,InterPro:IPR021929,PFAM:PF00931,PFAM:PF12061,PRINTS:PR00364,SwissProt:Q60CZ8,SwissProt:Q6L3Z4,SwissProt:Q6L438,TAIR:AT3G46530.1,TAIR:AT3G46730.1,TAIR:AT5G35450.1,TrEMBL:Q96485,TrEMBL:Q9LLD0,TrEMBL:Q9LLD4;Derives_from=GSCOCT00034025001;Name=Cc11_g04020;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1B-12,CC_functional_completeness:fragment,CC_gene:R1B-12,CC_gene:R1A-6,CC_gene:R1A-10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034025001~ Putative late blight resistance protein homolog R1B-12~ R1B-12~ fragment;original_location=complement(join(1657482..1659396%2C1656948..1657411%2C1656316..1656891));owner=coffea | |
| 58399 chr11 manual_curation exon 16319896 16320144 . - . Parent=GSCOCT00034025001 | |
| 58400 chr11 manual_curation exon 16321038 16321180 . - . Parent=GSCOCT00034025001 | |
| 58401 chr11 manual_curation exon 16321999 16322667 . - . Parent=GSCOCT00034025001 | |
| 58402 chr11 manual_curation exon 16322724 16323187 . - . Parent=GSCOCT00034025001 | |
| 58403 chr11 manual_curation exon 16323258 16325172 . - . Parent=GSCOCT00034025001 | |
| 58404 chr11 manual_curation CDS 16322092 16322667 . - 0 Parent=GSCOCT00034025001 | |
| 58405 chr11 manual_curation CDS 16322724 16323187 . - 1 Parent=GSCOCT00034025001 | |
| 58406 chr11 manual_curation CDS 16323258 16325172 . - 0 Parent=GSCOCT00034025001 | |
| 58407 chr11 manual_curation gene 16333223 16335981 . + . ID=GSCOCG00034027001;Name=Cc11_g04030 | |
| 58408 chr11 manual_curation mRNA 16333223 16335981 . + . ID=GSCOCT00034027001;Parent=GSCOCG00034027001;Name=Cc11_g04030 | |
| 58409 chr11 manual_curation polypeptide 16333223 16335981 . + . ID=GSCOCP00034027001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,PFAM:PF00560,SMART:SM00369,SwissProt:C0LGQ5,SwissProt:Q9C9H7,SwissProt:Q9FIZ3,TAIR:AT1G71400.1,TAIR:AT4G20140.1,TAIR:AT5G44700.1,TrEMBL:B9I1J3,TrEMBL:F6HP05,TrEMBL:G7ITB2;Derives_from=GSCOCT00034027001;Name=Cc11_g04030;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative LRR receptor-like serine/threonine-protein kinase GSO1,CC_functional_completeness:complete,CC_gene:GSO1,CC_gene:GSO2,CC_gene:RLP12;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034027001~ Putative LRR receptor-like serine/threonine-protein kinase GSO1~ GSO1~ complete;original_location=join(1667447..1667910%2C1668327..1668475%2C1668766..1668804%2C1669125..1669265%2C1669507..1669763%2C1670110..1670205);owner=coffea | |
| 58410 chr11 manual_curation exon 16333223 16333686 . + . Parent=GSCOCT00034027001 | |
| 58411 chr11 manual_curation exon 16334103 16334251 . + . Parent=GSCOCT00034027001 | |
| 58412 chr11 manual_curation exon 16334542 16334580 . + . Parent=GSCOCT00034027001 | |
| 58413 chr11 manual_curation exon 16334901 16335041 . + . Parent=GSCOCT00034027001 | |
| 58414 chr11 manual_curation exon 16335283 16335539 . + . Parent=GSCOCT00034027001 | |
| 58415 chr11 manual_curation exon 16335886 16335981 . + . Parent=GSCOCT00034027001 | |
| 58416 chr11 manual_curation CDS 16333223 16333686 . + 0 Parent=GSCOCT00034027001 | |
| 58417 chr11 manual_curation CDS 16334103 16334251 . + 2 Parent=GSCOCT00034027001 | |
| 58418 chr11 manual_curation CDS 16334542 16334580 . + 1 Parent=GSCOCT00034027001 | |
| 58419 chr11 manual_curation CDS 16334901 16335041 . + 1 Parent=GSCOCT00034027001 | |
| 58420 chr11 manual_curation CDS 16335283 16335539 . + 1 Parent=GSCOCT00034027001 | |
| 58421 chr11 manual_curation CDS 16335886 16335981 . + 0 Parent=GSCOCT00034027001 | |
| 58422 chr11 manual_curation gene 16348297 16349474 . + . ID=GSCOCG00034028001;Name=Cc11_g04040 | |
| 58423 chr11 manual_curation mRNA 16348297 16349474 . + . ID=GSCOCT00034028001;Parent=GSCOCG00034028001;Name=Cc11_g04040 | |
| 58424 chr11 manual_curation polypeptide 16348297 16349217 . + . ID=GSCOCP00034028001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR001223,InterPro:IPR013781,InterPro:IPR017853,PFAM:PF00704,SUPERFAMILY:SSF51445,SwissProt:P17541,SwissProt:P29024,SwissProt:P36908,TAIR:AT5G24090.1,TrEMBL:A0PD76,TrEMBL:F2YPN6,TrEMBL:Q43098;Derives_from=GSCOCT00034028001;Name=Cc11_g04040;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0043169,CC_EC_number:3.2.1.17,PRODUCT:Putative Acidic endochitinase,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034028001~ Putative Acidic endochitinase~ unknown_gene~ complete;original_location=1682521..1683441;owner=coffea | |
| 58425 chr11 manual_curation exon 16348297 16349474 . + . Parent=GSCOCT00034028001 | |
| 58426 chr11 manual_curation CDS 16348297 16349217 . + 0 Parent=GSCOCT00034028001 | |
| 58427 chr11 manual_curation gene 16364960 16369047 . + . ID=GSCOCG00034030001;Name=Cc11_g04050 | |
| 58428 chr11 manual_curation mRNA 16364960 16369047 . + . ID=GSCOCT00034030001;Parent=GSCOCG00034030001;Name=Cc11_g04050 | |
| 58429 chr11 manual_curation polypeptide 16364960 16369047 . + . ID=GSCOCP00034030001;Dbxref=InterPro:IPR004342,PFAM:PF03124,PROFILE:PS51380,SwissProt:Q651J5,SwissProt:Q6K991,SwissProt:Q8S403,TAIR:AT1G14040.1,TAIR:AT1G68740.1,TAIR:AT3G23430.1,TrEMBL:B9HKS4,TrEMBL:B9HSH0,TrEMBL:B9SS53;Derives_from=GSCOCT00034030001;Name=Cc11_g04050;Ontology_term=CC_evidence_code:ISS,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Putative Phosphate transporter PHO1,CC_functional_completeness:fragment,CC_gene:PHO1,CC_gene:PHO1-2,CC_gene:PHO1-3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034030001~ Putative Phosphate transporter PHO1~ PHO1~ fragment;original_location=join(1699184..1699282%2C1699653..1699781%2C1700045..1700063%2C1700163..1700219%2C1700314..1700524%2C1702487..1702511%2C1702672..1702845%2C1702940..1703074%2C1703200..1703271);owner=coffea | |
| 58430 chr11 manual_curation exon 16364960 16365058 . + . Parent=GSCOCT00034030001 | |
| 58431 chr11 manual_curation exon 16365429 16365557 . + . Parent=GSCOCT00034030001 | |
| 58432 chr11 manual_curation exon 16365821 16365839 . + . Parent=GSCOCT00034030001 | |
| 58433 chr11 manual_curation exon 16365939 16365995 . + . Parent=GSCOCT00034030001 | |
| 58434 chr11 manual_curation exon 16366090 16366300 . + . Parent=GSCOCT00034030001 | |
| 58435 chr11 manual_curation exon 16368263 16368287 . + . Parent=GSCOCT00034030001 | |
| 58436 chr11 manual_curation exon 16368448 16368621 . + . Parent=GSCOCT00034030001 | |
| 58437 chr11 manual_curation exon 16368716 16368850 . + . Parent=GSCOCT00034030001 | |
| 58438 chr11 manual_curation exon 16368976 16369047 . + . Parent=GSCOCT00034030001 | |
| 58439 chr11 manual_curation CDS 16364960 16365058 . + 0 Parent=GSCOCT00034030001 | |
| 58440 chr11 manual_curation CDS 16365429 16365557 . + 0 Parent=GSCOCT00034030001 | |
| 58441 chr11 manual_curation CDS 16365821 16365839 . + 0 Parent=GSCOCT00034030001 | |
| 58442 chr11 manual_curation CDS 16365939 16365995 . + 1 Parent=GSCOCT00034030001 | |
| 58443 chr11 manual_curation CDS 16366090 16366300 . + 1 Parent=GSCOCT00034030001 | |
| 58444 chr11 manual_curation CDS 16368263 16368287 . + 2 Parent=GSCOCT00034030001 | |
| 58445 chr11 manual_curation CDS 16368448 16368621 . + 0 Parent=GSCOCT00034030001 | |
| 58446 chr11 manual_curation CDS 16368716 16368850 . + 0 Parent=GSCOCT00034030001 | |
| 58447 chr11 manual_curation CDS 16368976 16369047 . + 0 Parent=GSCOCT00034030001 | |
| 58448 chr11 manual_curation gene 16408313 16408870 . - . ID=GSCOCG00034034001;Name=Cc11_g04060 | |
| 58449 chr11 manual_curation mRNA 16408313 16408870 . - . ID=GSCOCT00034034001;Parent=GSCOCG00034034001;Name=Cc11_g04060 | |
| 58450 chr11 manual_curation polypeptide 16408511 16408870 . - . ID=GSCOCP00034034001;Derives_from=GSCOCT00034034001;Name=Cc11_g04060;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034034001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1743000..1743094%2C1742735..1742780));owner=coffea | |
| 58451 chr11 manual_curation exon 16408313 16408556 . - . Parent=GSCOCT00034034001 | |
| 58452 chr11 manual_curation exon 16408776 16408870 . - . Parent=GSCOCT00034034001 | |
| 58453 chr11 manual_curation CDS 16408511 16408556 . - 2 Parent=GSCOCT00034034001 | |
| 58454 chr11 manual_curation CDS 16408776 16408870 . - 0 Parent=GSCOCT00034034001 | |
| 58455 chr11 manual_curation gene 16409470 16414411 . - . ID=GSCOCG00034035001;Name=Cc11_g04070 | |
| 58456 chr11 manual_curation mRNA 16409470 16414411 . - . ID=GSCOCT00034035001;Parent=GSCOCG00034035001;Name=Cc11_g04070 | |
| 58457 chr11 manual_curation polypeptide 16409470 16414411 . - . ID=GSCOCP00034035001;Dbxref=InterPro:IPR000172,InterPro:IPR007867,InterPro:IPR012400,InterPro:IPR013027,PFAM:PF00732,PFAM:PF05199,PIR:PIRSF028937,PRINTS:PR00368,SwissProt:B5WWZ8,SwissProt:B5WWZ9,SwissProt:Q9LW56,TAIR:AT1G03990.1,TAIR:AT3G23410.1,TAIR:AT4G28570.1,TrEMBL:A5AH38,TrEMBL:B9HSG9,TrEMBL:F6H8T4;Derives_from=GSCOCT00034035001;Name=Cc11_g04070;Ontology_term=CC_evidence_code:ISS,GO:0050660,CC_EC_number:missing_EC_number,PRODUCT:Long-chain-alcohol oxidase FAO1,CC_functional_completeness:complete,CC_gene:FAO1,CC_gene:FAO2,CC_gene:FAO3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034035001~ Long-chain-alcohol oxidase FAO1~ FAO1~ complete;original_location=complement(join(1748405..1748635%2C1748013..1748285%2C1743694..1745439));owner=coffea | |
| 58458 chr11 manual_curation exon 16409470 16411215 . - . Parent=GSCOCT00034035001 | |
| 58459 chr11 manual_curation exon 16413789 16414061 . - . Parent=GSCOCT00034035001 | |
| 58460 chr11 manual_curation exon 16414181 16414411 . - . Parent=GSCOCT00034035001 | |
| 58461 chr11 manual_curation CDS 16409470 16411215 . - 0 Parent=GSCOCT00034035001 | |
| 58462 chr11 manual_curation CDS 16413789 16414061 . - 0 Parent=GSCOCT00034035001 | |
| 58463 chr11 manual_curation CDS 16414181 16414411 . - 0 Parent=GSCOCT00034035001 | |
| 58464 chr11 manual_curation gene 16463576 16472379 . - . ID=GSCOCG00034037001;Name=Cc11_g04080 | |
| 58465 chr11 manual_curation mRNA 16463576 16472379 . - . ID=GSCOCT00034037001;Parent=GSCOCG00034037001;Name=Cc11_g04080 | |
| 58466 chr11 manual_curation polypeptide 16464830 16469182 . - . ID=GSCOCP00034037001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q60CZ8,SwissProt:Q6L403,SwissProt:Q6L438,TAIR:AT5G35450.1,TAIR:AT5G43470.1,TAIR:AT5G48620.1,TrEMBL:Q96485,TrEMBL:Q9LLD0,TrEMBL:Q9LLD4;Derives_from=GSCOCT00034037001;Name=Cc11_g04080;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative Disease resistance protein (CC-NBS-LRR class) family,CC_functional_completeness:modules,CC_gene:R1B-17,CC_gene:R1A-6,CC_gene:R1A-10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034037001~ Putative Disease resistance protein (CC-NBS-LRR class) family~ R1B-17~ modules;original_location=complement(1799054..1803406);owner=coffea | |
| 58467 chr11 manual_curation exon 16469467 16469531 . - . Parent=GSCOCT00034037001 | |
| 58468 chr11 manual_curation exon 16472339 16472379 . - . Parent=GSCOCT00034037001 | |
| 58469 chr11 manual_curation exon 16463576 16469319 . - . Parent=GSCOCT00034037001 | |
| 58470 chr11 manual_curation CDS 16464830 16469182 . - 0 Parent=GSCOCT00034037001 | |
| 58471 chr11 manual_curation gene 16485356 16485808 . - . ID=GSCOCG00034039001;Name=Cc11_g04090 | |
| 58472 chr11 manual_curation mRNA 16485356 16485808 . - . ID=GSCOCT00034039001;Parent=GSCOCG00034039001;Name=Cc11_g04090 | |
| 58473 chr11 manual_curation polypeptide 16485356 16485808 . - . ID=GSCOCP00034039001;Dbxref=InterPro:IPR002182,PFAM:PF00931,SwissProt:Q60CZ8,SwissProt:Q6L438,SwissProt:Q6L440,TAIR:AT3G46530.1,TAIR:AT5G43470.1,TAIR:AT5G48620.1,TrEMBL:A7U171,TrEMBL:A7U177,TrEMBL:A7U180;Derives_from=GSCOCT00034039001;Name=Cc11_g04090;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1A-6,CC_functional_completeness:fragment,CC_gene:R1A-6,CC_gene:R1A-10,CC_gene:R1A-3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034039001~ Putative late blight resistance protein homolog R1A-6~ R1A-6~ fragment;original_location=complement(1819580..1820032);owner=coffea | |
| 58474 chr11 manual_curation exon 16485356 16485808 . - . Parent=GSCOCT00034039001 | |
| 58475 chr11 manual_curation CDS 16485356 16485808 . - 0 Parent=GSCOCT00034039001 | |
| 58476 chr11 manual_curation gene 16486562 16488028 . - . ID=GSCOCG00034040001;Name=Cc11_g04100 | |
| 58477 chr11 manual_curation mRNA 16486562 16488028 . - . ID=GSCOCT00034040001;Parent=GSCOCG00034040001;Name=Cc11_g04100 | |
| 58478 chr11 manual_curation polypeptide 16486562 16488028 . - . ID=GSCOCP00034040001;Dbxref=TAIR:AT4G02030.2,TrEMBL:B9I9J0,TrEMBL:B9RNE7,TrEMBL:D7U2I2;Derives_from=GSCOCT00034040001;Name=Cc11_g04100;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Vps51/Vps67 family (components of vesicular transport) protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034040001~ Vps51/Vps67 family (components of vesicular transport) protein~ unknown_gene~ fragment;original_location=complement(join(1822157..1822252%2C1821941..1822057%2C1821459..1821530%2C1821313..1821357%2C1820786..1821025));owner=coffea | |
| 58479 chr11 manual_curation exon 16486562 16486801 . - . Parent=GSCOCT00034040001 | |
| 58480 chr11 manual_curation exon 16487089 16487133 . - . Parent=GSCOCT00034040001 | |
| 58481 chr11 manual_curation exon 16487235 16487306 . - . Parent=GSCOCT00034040001 | |
| 58482 chr11 manual_curation exon 16487717 16487833 . - . Parent=GSCOCT00034040001 | |
| 58483 chr11 manual_curation exon 16487933 16488028 . - . Parent=GSCOCT00034040001 | |
| 58484 chr11 manual_curation CDS 16486562 16486801 . - 0 Parent=GSCOCT00034040001 | |
| 58485 chr11 manual_curation CDS 16487089 16487133 . - 0 Parent=GSCOCT00034040001 | |
| 58486 chr11 manual_curation CDS 16487235 16487306 . - 0 Parent=GSCOCT00034040001 | |
| 58487 chr11 manual_curation CDS 16487717 16487833 . - 0 Parent=GSCOCT00034040001 | |
| 58488 chr11 manual_curation CDS 16487933 16488028 . - 0 Parent=GSCOCT00034040001 | |
| 58489 chr11 manual_curation gene 16592527 16594742 . - . ID=GSCOCG00034043001;Name=Cc11_g04110 | |
| 58490 chr11 manual_curation mRNA 16592527 16594742 . - . ID=GSCOCT00034043001;Parent=GSCOCG00034043001;Name=Cc11_g04110 | |
| 58491 chr11 manual_curation polypeptide 16592527 16594742 . - . ID=GSCOCP00034043001;Dbxref=TrEMBL:A5C1K3,TrEMBL:D7UC94,TrEMBL:F6I619;Derives_from=GSCOCT00034043001;Name=Cc11_g04110;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034043001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1928898..1928966%2C1928189..1928227%2C1926751..1927155));owner=coffea | |
| 58492 chr11 manual_curation exon 16592527 16592931 . - . Parent=GSCOCT00034043001 | |
| 58493 chr11 manual_curation exon 16593965 16594003 . - . Parent=GSCOCT00034043001 | |
| 58494 chr11 manual_curation exon 16594674 16594742 . - . Parent=GSCOCT00034043001 | |
| 58495 chr11 manual_curation CDS 16592527 16592931 . - 0 Parent=GSCOCT00034043001 | |
| 58496 chr11 manual_curation CDS 16593965 16594003 . - 0 Parent=GSCOCT00034043001 | |
| 58497 chr11 manual_curation CDS 16594674 16594742 . - 0 Parent=GSCOCT00034043001 | |
| 58498 chr11 manual_curation gene 16660619 16661305 . - . ID=GSCOCG00034046001;Name=Cc11_g04120 | |
| 58499 chr11 manual_curation mRNA 16660619 16661305 . - . ID=GSCOCT00034046001;Parent=GSCOCG00034046001;Name=Cc11_g04120 | |
| 58500 chr11 manual_curation polypeptide 16660619 16661305 . - . ID=GSCOCP00034046001;Dbxref=InterPro:IPR002182,PFAM:PF00931,SwissProt:Q60CZ8,SwissProt:Q6L403,SwissProt:Q6L438,TAIR:AT1G10920.1,TAIR:AT3G46530.1,TAIR:AT3G46710.1,TrEMBL:Q38QB6,TrEMBL:Q6L432,TrEMBL:Q9LLD0;Derives_from=GSCOCT00034046001;Name=Cc11_g04120;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1A-6,CC_functional_completeness:fragment,CC_gene:R1A-6,CC_gene:R1A-10,CC_gene:R1B-17;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034046001~ Putative late blight resistance protein homolog R1A-6~ R1A-6~ fragment;original_location=complement(1994843..1995529);owner=coffea | |
| 58501 chr11 manual_curation exon 16660619 16661305 . - . Parent=GSCOCT00034046001 | |
| 58502 chr11 manual_curation CDS 16660619 16661305 . - 0 Parent=GSCOCT00034046001 | |
| 58503 chr11 manual_curation gene 16666667 16668086 . - . ID=GSCOCG00034048001;Name=Cc11_g04130 | |
| 58504 chr11 manual_curation mRNA 16666667 16668086 . - . ID=GSCOCT00034048001;Parent=GSCOCG00034048001;Name=Cc11_g04130 | |
| 58505 chr11 manual_curation polypeptide 16666667 16667035 . - . ID=GSCOCP00034048001;Derives_from=GSCOCT00034048001;Name=Cc11_g04130;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034048001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(2000891..2001259);owner=coffea | |
| 58506 chr11 manual_curation exon 16667584 16668086 . - . Parent=GSCOCT00034048001 | |
| 58507 chr11 manual_curation exon 16666667 16667545 . - . Parent=GSCOCT00034048001 | |
| 58508 chr11 manual_curation CDS 16666667 16667035 . - 0 Parent=GSCOCT00034048001 | |
| 58509 chr11 manual_curation gene 16677671 16681325 . + . ID=GSCOCG00034050001;Name=Cc11_g04140 | |
| 58510 chr11 manual_curation mRNA 16677671 16681325 . + . ID=GSCOCT00034050001;Parent=GSCOCG00034050001;Name=Cc11_g04140 | |
| 58511 chr11 manual_curation polypeptide 16677671 16681075 . + . ID=GSCOCP00034050001;Dbxref=InterPro:IPR004516,PANTHER:PTHR11476,SwissProt:O43011,SwissProt:P93422,TrEMBL:B9IQ90,TrEMBL:D7TL75,TrEMBL:I1KQ70;Derives_from=GSCOCT00034050001;Name=Cc11_g04140;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0004821,GO:0005524,GO:0005737,GO:0006412,GO:0006427,CC_EC_number:missing_EC_number,PRODUCT:Putative Histidine--tRNA ligase,CC_functional_completeness:fragment,CC_gene:Os05g0150900,CC_gene:hts1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034050001~ Putative Histidine--tRNA ligase~ Os05g0150900~ fragment;original_location=join(2011895..2011926%2C2013906..2014022%2C2014780..2014840%2C2015120..2015299);owner=coffea | |
| 58512 chr11 manual_curation exon 16677671 16677702 . + . Parent=GSCOCT00034050001 | |
| 58513 chr11 manual_curation exon 16679682 16679798 . + . Parent=GSCOCT00034050001 | |
| 58514 chr11 manual_curation exon 16680556 16680616 . + . Parent=GSCOCT00034050001 | |
| 58515 chr11 manual_curation exon 16680896 16681325 . + . Parent=GSCOCT00034050001 | |
| 58516 chr11 manual_curation CDS 16677671 16677702 . + 0 Parent=GSCOCT00034050001 | |
| 58517 chr11 manual_curation CDS 16679682 16679798 . + 2 Parent=GSCOCT00034050001 | |
| 58518 chr11 manual_curation CDS 16680556 16680616 . + 2 Parent=GSCOCT00034050001 | |
| 58519 chr11 manual_curation CDS 16680896 16681075 . + 0 Parent=GSCOCT00034050001 | |
| 58520 chr11 manual_curation gene 16681387 16688695 . - . ID=GSCOCG00034051001;Name=Cc11_g04150 | |
| 58521 chr11 manual_curation mRNA 16681387 16688695 . - . ID=GSCOCT00034051001;Parent=GSCOCG00034051001;Name=Cc11_g04150 | |
| 58522 chr11 manual_curation polypeptide 16683292 16688695 . - . ID=GSCOCP00034051001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,InterPro:IPR021929,PFAM:PF00931,PFAM:PF12061,PRINTS:PR00364,SwissProt:Q6L3Z7,SwissProt:Q6L403,SwissProt:Q6L438,TAIR:AT1G59218.1,TAIR:AT1G59780.1,TAIR:AT3G46530.1,TrEMBL:Q6L432,TrEMBL:Q9LLD0,TrEMBL:Q9LLD4;Derives_from=GSCOCT00034051001;Name=Cc11_g04150;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative NB-ARC domain-containing disease resistance protein,CC_functional_completeness:modules,CC_gene:R1B-17,CC_gene:R1B-14,CC_gene:R1A-6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034051001~ Putative NB-ARC domain-containing disease resistance protein~ R1B-17~ modules;original_location=complement(join(2020721..2022919%2C2018048..2020252%2C2017902..2017983%2C2017516..2017613));owner=coffea | |
| 58523 chr11 manual_curation exon 16681387 16681610 . - . Parent=GSCOCT00034051001 | |
| 58524 chr11 manual_curation exon 16682022 16682145 . - . Parent=GSCOCT00034051001 | |
| 58525 chr11 manual_curation exon 16682486 16682568 . - . Parent=GSCOCT00034051001 | |
| 58526 chr11 manual_curation exon 16682932 16683076 . - . Parent=GSCOCT00034051001 | |
| 58527 chr11 manual_curation exon 16683192 16683389 . - . Parent=GSCOCT00034051001 | |
| 58528 chr11 manual_curation exon 16683678 16683759 . - . Parent=GSCOCT00034051001 | |
| 58529 chr11 manual_curation exon 16683824 16686028 . - . Parent=GSCOCT00034051001 | |
| 58530 chr11 manual_curation exon 16686497 16688695 . - . Parent=GSCOCT00034051001 | |
| 58531 chr11 manual_curation CDS 16683292 16683389 . - 1 Parent=GSCOCT00034051001 | |
| 58532 chr11 manual_curation CDS 16683678 16683759 . - 0 Parent=GSCOCT00034051001 | |
| 58533 chr11 manual_curation CDS 16683824 16686028 . - 0 Parent=GSCOCT00034051001 | |
| 58534 chr11 manual_curation CDS 16686497 16688695 . - 0 Parent=GSCOCT00034051001 | |
| 58535 chr11 manual_curation gene 16694545 16698302 . - . ID=GSCOCG00034052001;Name=Cc11_g04160 | |
| 58536 chr11 manual_curation mRNA 16694545 16698302 . - . ID=GSCOCT00034052001;Parent=GSCOCG00034052001;Name=Cc11_g04160 | |
| 58537 chr11 manual_curation polypeptide 16694927 16698170 . - . ID=GSCOCP00034052001;Dbxref=InterPro:IPR000467,PFAM:PF01585,PROFILE:PS50174,SMART:SM00443,TAIR:AT3G52350.1,TAIR:AT5G08535.1,TrEMBL:B9HK16,TrEMBL:B9RGI9,TrEMBL:I1LFB7;Derives_from=GSCOCT00034052001;Name=Cc11_g04160;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0005622,CC_EC_number:missing_EC_number,PRODUCT:D111/G-patch domain-containing protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034052001~ D111/G-patch domain-containing protein~ unknown_gene~ fragment;original_location=complement(join(2032263..2032394%2C2031996..2032049%2C2031225..2031353%2C2029151..2029279));owner=coffea | |
| 58538 chr11 manual_curation exon 16694545 16695055 . - . Parent=GSCOCT00034052001 | |
| 58539 chr11 manual_curation exon 16697001 16697129 . - . Parent=GSCOCT00034052001 | |
| 58540 chr11 manual_curation exon 16697772 16697825 . - . Parent=GSCOCT00034052001 | |
| 58541 chr11 manual_curation exon 16698039 16698302 . - . Parent=GSCOCT00034052001 | |
| 58542 chr11 manual_curation CDS 16694927 16695055 . - 0 Parent=GSCOCT00034052001 | |
| 58543 chr11 manual_curation CDS 16697001 16697129 . - 0 Parent=GSCOCT00034052001 | |
| 58544 chr11 manual_curation CDS 16697772 16697825 . - 0 Parent=GSCOCT00034052001 | |
| 58545 chr11 manual_curation CDS 16698039 16698170 . - 0 Parent=GSCOCT00034052001 | |
| 58546 chr11 manual_curation gene 16699439 16710490 . + . ID=GSCOCG00034053001;Name=Cc11_g04170 | |
| 58547 chr11 manual_curation mRNA 16699439 16710490 . + . ID=GSCOCT00034053001;Parent=GSCOCG00034053001;Name=Cc11_g04170 | |
| 58548 chr11 manual_curation polypeptide 16699545 16710094 . + . ID=GSCOCP00034053001;Dbxref=InterPro:IPR001375,InterPro:IPR002470,InterPro:IPR004106,PANTHER:PTHR11757,PFAM:PF00326,PFAM:PF02897,PRINTS:PR00862,SUPERFAMILY:SSF50993,SwissProt:P24555,SwissProt:P55656,SwissProt:Q59536,TAIR:AT1G50380.1,TAIR:AT1G69020.1,TAIR:AT5G66960.1,TrEMBL:B9HG83,TrEMBL:F6HVY4,TrEMBL:I1NF29;Derives_from=GSCOCT00034053001;Name=Cc11_g04170;Ontology_term=CC_evidence_code:ISS,GO:0004252,GO:0006508,GO:0008236,CC_EC_number:3.4.21.83,PRODUCT:Putative Protease 2,CC_functional_completeness:complete,CC_gene:ptrB,CC_gene:NGR_a01580;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034053001~ Putative Protease 2~ ptrB~ complete;original_location=join(2033769..2033967%2C2034623..2034906%2C2034996..2035190%2C2035872..2036218%2C2036866..2037157%2C2038166..2038324%2C2039043..2039408%2C2041922..2041987%2C2042130..2042178%2C2043235..2043358%2C2044222..2044318);owner=coffea | |
| 58549 chr11 manual_curation exon 16699439 16699743 . + . Parent=GSCOCT00034053001 | |
| 58550 chr11 manual_curation exon 16700399 16700682 . + . Parent=GSCOCT00034053001 | |
| 58551 chr11 manual_curation exon 16700772 16700966 . + . Parent=GSCOCT00034053001 | |
| 58552 chr11 manual_curation exon 16701648 16701994 . + . Parent=GSCOCT00034053001 | |
| 58553 chr11 manual_curation exon 16702642 16702933 . + . Parent=GSCOCT00034053001 | |
| 58554 chr11 manual_curation exon 16703942 16704100 . + . Parent=GSCOCT00034053001 | |
| 58555 chr11 manual_curation exon 16704819 16705184 . + . Parent=GSCOCT00034053001 | |
| 58556 chr11 manual_curation exon 16707698 16707763 . + . Parent=GSCOCT00034053001 | |
| 58557 chr11 manual_curation exon 16707906 16707954 . + . Parent=GSCOCT00034053001 | |
| 58558 chr11 manual_curation exon 16709011 16709134 . + . Parent=GSCOCT00034053001 | |
| 58559 chr11 manual_curation exon 16709998 16710490 . + . Parent=GSCOCT00034053001 | |
| 58560 chr11 manual_curation CDS 16699545 16699743 . + 0 Parent=GSCOCT00034053001 | |
| 58561 chr11 manual_curation CDS 16700399 16700682 . + 1 Parent=GSCOCT00034053001 | |
| 58562 chr11 manual_curation CDS 16700772 16700966 . + 0 Parent=GSCOCT00034053001 | |
| 58563 chr11 manual_curation CDS 16701648 16701994 . + 0 Parent=GSCOCT00034053001 | |
| 58564 chr11 manual_curation CDS 16702642 16702933 . + 2 Parent=GSCOCT00034053001 | |
| 58565 chr11 manual_curation CDS 16703942 16704100 . + 0 Parent=GSCOCT00034053001 | |
| 58566 chr11 manual_curation CDS 16704819 16705184 . + 0 Parent=GSCOCT00034053001 | |
| 58567 chr11 manual_curation CDS 16707698 16707763 . + 0 Parent=GSCOCT00034053001 | |
| 58568 chr11 manual_curation CDS 16707906 16707954 . + 0 Parent=GSCOCT00034053001 | |
| 58569 chr11 manual_curation CDS 16709011 16709134 . + 1 Parent=GSCOCT00034053001 | |
| 58570 chr11 manual_curation CDS 16709998 16710094 . + 2 Parent=GSCOCT00034053001 | |
| 58571 chr11 manual_curation gene 16720117 16721178 . - . ID=GSCOCG00034056001;Name=Cc11_g04180 | |
| 58572 chr11 manual_curation mRNA 16720117 16721178 . - . ID=GSCOCT00034056001;Parent=GSCOCG00034056001;Name=Cc11_g04180 | |
| 58573 chr11 manual_curation polypeptide 16720117 16721178 . - . ID=GSCOCP00034056001;Dbxref=InterPro:IPR000863,PFAM:PF00685,SwissProt:Q8L5A7,SwissProt:Q9FZ80,SwissProt:Q9M1V1,TAIR:AT1G18590.1,TAIR:AT3G45080.1,TAIR:AT5G07010.1,TrEMBL:B9NHR4,TrEMBL:B9P614,TrEMBL:F6GSG4;Derives_from=GSCOCT00034056001;Name=Cc11_g04180;Ontology_term=CC_evidence_code:ISS,GO:0008146,CC_EC_number:2.8.2.4,PRODUCT:Putative Cytosolic sulfotransferase 17,CC_functional_completeness:complete,CC_gene:SOT17,CC_gene:SOT15,CC_gene:SOT6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00034056001~ Putative Cytosolic sulfotransferase 17~ SOT17~ complete;original_location=complement(2054341..2055402);owner=coffea | |
| 58574 chr11 manual_curation exon 16720117 16721178 . - . Parent=GSCOCT00034056001 | |
| 58575 chr11 manual_curation CDS 16720117 16721178 . - 0 Parent=GSCOCT00034056001 | |
| 58576 chr11 manual_curation gene 16806912 16808489 . - . ID=GSCOCG00001330001;Name=Cc11_g04190 | |
| 58577 chr11 manual_curation mRNA 16806912 16808489 . - . ID=GSCOCT00001330001;Parent=GSCOCG00001330001;Name=Cc11_g04190 | |
| 58578 chr11 manual_curation polypeptide 16806912 16808489 . - . ID=GSCOCP00001330001;Dbxref=InterPro:IPR003663,InterPro:IPR005828,InterPro:IPR005829,InterPro:IPR016196,InterPro:IPR020846,PFAM:PF00083,PRINTS:PR00171,PROFILE:PS50850,PROSITE:PS00217,SUPERFAMILY:SSF103473,SwissProt:Q8VZ80,SwissProt:Q9XIH6,SwissProt:Q9XIH7,TAIR:AT2G16120.1,TAIR:AT2G16130.1,TAIR:AT3G18830.1,TIGRFAMs:TIGR00879,TrEMBL:A7J0C1,TrEMBL:Q70W27,TrEMBL:Q70W28;Derives_from=GSCOCT00001330001;Name=Cc11_g04190;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006810,GO:0016020,GO:0016021,GO:0022891,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Putative polyol transporter 1,CC_functional_completeness:complete,CC_gene:PLT1,CC_gene:PLT2,CC_gene:PLT5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001330001~ Putative polyol transporter 1~ PLT1~ complete;original_location=complement(42131..43708);owner=coffea | |
| 58579 chr11 manual_curation exon 16806912 16808489 . - . Parent=GSCOCT00001330001 | |
| 58580 chr11 manual_curation CDS 16806912 16808489 . - 0 Parent=GSCOCT00001330001 | |
| 58581 chr11 manual_curation gene 16869538 16871250 . - . ID=GSCOCG00001333001;Name=Cc11_g04200 | |
| 58582 chr11 manual_curation mRNA 16869538 16871250 . - . ID=GSCOCT00001333001;Parent=GSCOCG00001333001;Name=Cc11_g04200 | |
| 58583 chr11 manual_curation polypeptide 16869538 16871250 . - . ID=GSCOCP00001333001;Derives_from=GSCOCT00001333001;Name=Cc11_g04200;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001333001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(106366..106469%2C105970..106110%2C104757..104976));owner=coffea | |
| 58584 chr11 manual_curation exon 16869538 16869757 . - . Parent=GSCOCT00001333001 | |
| 58585 chr11 manual_curation exon 16870751 16870891 . - . Parent=GSCOCT00001333001 | |
| 58586 chr11 manual_curation exon 16871147 16871250 . - . Parent=GSCOCT00001333001 | |
| 58587 chr11 manual_curation CDS 16869538 16869757 . - 2 Parent=GSCOCT00001333001 | |
| 58588 chr11 manual_curation CDS 16870751 16870891 . - 2 Parent=GSCOCT00001333001 | |
| 58589 chr11 manual_curation CDS 16871147 16871250 . - 0 Parent=GSCOCT00001333001 | |
| 58590 chr11 manual_curation gene 16875741 16879414 . - . ID=GSCOCG00001334001;Name=Cc11_g04210 | |
| 58591 chr11 manual_curation mRNA 16875741 16879414 . - . ID=GSCOCT00001334001;Parent=GSCOCG00001334001;Name=Cc11_g04210 | |
| 58592 chr11 manual_curation polypeptide 16875741 16878228 . - . ID=GSCOCP00001334001;Dbxref=TAIR:AT1G43722.1,TAIR:AT5G41980.1,TrEMBL:A2ZTW0,TrEMBL:B9FC79,TrEMBL:Q7XLZ2;Derives_from=GSCOCT00001334001;Name=Cc11_g04210;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001334001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=complement(join(113160..113447%2C112940..113051%2C112638..112730%2C112375..112384%2C111932..112042%2C111696..111798%2C110960..111607));owner=coffea | |
| 58593 chr11 manual_curation exon 16875741 16876388 . - . Parent=GSCOCT00001334001 | |
| 58594 chr11 manual_curation exon 16876477 16876579 . - . Parent=GSCOCT00001334001 | |
| 58595 chr11 manual_curation exon 16876713 16876823 . - . Parent=GSCOCT00001334001 | |
| 58596 chr11 manual_curation exon 16877156 16877165 . - . Parent=GSCOCT00001334001 | |
| 58597 chr11 manual_curation exon 16877419 16877511 . - . Parent=GSCOCT00001334001 | |
| 58598 chr11 manual_curation exon 16877721 16877832 . - . Parent=GSCOCT00001334001 | |
| 58599 chr11 manual_curation exon 16877941 16879414 . - . Parent=GSCOCT00001334001 | |
| 58600 chr11 manual_curation CDS 16875741 16876388 . - 0 Parent=GSCOCT00001334001 | |
| 58601 chr11 manual_curation CDS 16876477 16876579 . - 2 Parent=GSCOCT00001334001 | |
| 58602 chr11 manual_curation CDS 16876713 16876823 . - 2 Parent=GSCOCT00001334001 | |
| 58603 chr11 manual_curation CDS 16877156 16877165 . - 1 Parent=GSCOCT00001334001 | |
| 58604 chr11 manual_curation CDS 16877419 16877511 . - 1 Parent=GSCOCT00001334001 | |
| 58605 chr11 manual_curation CDS 16877721 16877832 . - 0 Parent=GSCOCT00001334001 | |
| 58606 chr11 manual_curation CDS 16877941 16878228 . - 0 Parent=GSCOCT00001334001 | |
| 58607 chr11 manual_curation gene 16881808 16883385 . - . ID=GSCOCG00001335001;Name=Cc11_g04220 | |
| 58608 chr11 manual_curation mRNA 16881808 16883385 . - . ID=GSCOCT00001335001;Parent=GSCOCG00001335001;Name=Cc11_g04220 | |
| 58609 chr11 manual_curation polypeptide 16881808 16883385 . - . ID=GSCOCP00001335001;Dbxref=InterPro:IPR003663,InterPro:IPR005828,InterPro:IPR005829,InterPro:IPR016196,InterPro:IPR020846,PFAM:PF00083,PRINTS:PR00171,PROFILE:PS50850,PROSITE:PS00217,SUPERFAMILY:SSF103473,SwissProt:Q8VZ80,SwissProt:Q9XIH6,SwissProt:Q9XIH7,TAIR:AT2G16120.1,TAIR:AT2G16130.1,TAIR:AT3G18830.1,TIGRFAMs:TIGR00879,TrEMBL:A7J0C1,TrEMBL:B2D0J3,TrEMBL:Q70W28;Derives_from=GSCOCT00001335001;Name=Cc11_g04220;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006810,GO:0016020,GO:0016021,GO:0022891,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Putative polyol transporter 1,CC_functional_completeness:complete,CC_gene:PLT1,CC_gene:PLT5,CC_gene:PLT2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001335001~ Putative polyol transporter 1~ PLT1~ complete;original_location=complement(join(117791..118604%2C117027..117724));owner=coffea | |
| 58610 chr11 manual_curation exon 16881808 16882505 . - . Parent=GSCOCT00001335001 | |
| 58611 chr11 manual_curation exon 16882572 16883385 . - . Parent=GSCOCT00001335001 | |
| 58612 chr11 manual_curation CDS 16881808 16882505 . - 1 Parent=GSCOCT00001335001 | |
| 58613 chr11 manual_curation CDS 16882572 16883385 . - 0 Parent=GSCOCT00001335001 | |
| 58614 chr11 manual_curation gene 16895700 16897277 . - . ID=GSCOCG00001336001;Name=Cc11_g04230 | |
| 58615 chr11 manual_curation mRNA 16895700 16897277 . - . ID=GSCOCT00001336001;Parent=GSCOCG00001336001;Name=Cc11_g04230 | |
| 58616 chr11 manual_curation polypeptide 16895700 16897277 . - . ID=GSCOCP00001336001;Dbxref=InterPro:IPR003663,InterPro:IPR005828,InterPro:IPR005829,InterPro:IPR016196,InterPro:IPR020846,PFAM:PF00083,PRINTS:PR00171,PROFILE:PS50850,PROSITE:PS00217,SUPERFAMILY:SSF103473,SwissProt:Q8VZ80,SwissProt:Q9XIH6,SwissProt:Q9XIH7,TAIR:AT2G16120.1,TAIR:AT2G16130.1,TAIR:AT3G18830.1,TIGRFAMs:TIGR00879,TrEMBL:A7J0C1,TrEMBL:B2D0J3,TrEMBL:Q7XB36;Derives_from=GSCOCT00001336001;Name=Cc11_g04230;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006810,GO:0016020,GO:0016021,GO:0022891,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Polyol transporter 5,CC_functional_completeness:complete,CC_gene:PLT5,CC_gene:PLT1,CC_gene:PLT2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001336001~ Polyol transporter 5~ PLT5~ complete;original_location=complement(join(131815..132496%2C130919..131760));owner=coffea | |
| 58617 chr11 manual_curation exon 16895700 16896541 . - . Parent=GSCOCT00001336001 | |
| 58618 chr11 manual_curation exon 16896596 16897277 . - . Parent=GSCOCT00001336001 | |
| 58619 chr11 manual_curation CDS 16895700 16896541 . - 1 Parent=GSCOCT00001336001 | |
| 58620 chr11 manual_curation CDS 16896596 16897277 . - 0 Parent=GSCOCT00001336001 | |
| 58621 chr11 manual_curation gene 16899525 16905409 . - . ID=GSCOCG00001337001;Name=Cc11_g04240 | |
| 58622 chr11 manual_curation mRNA 16899525 16905409 . - . ID=GSCOCT00001337001;Parent=GSCOCG00001337001;Name=Cc11_g04240 | |
| 58623 chr11 manual_curation polypeptide 16899752 16904178 . - . ID=GSCOCP00001337001;Dbxref=InterPro:IPR000728,InterPro:IPR004733,InterPro:IPR010918,InterPro:IPR016188,PFAM:PF00586,PFAM:PF02769,SUPERFAMILY:SSF55326,SUPERFAMILY:SSF56042,SwissProt:B5EFU7,SwissProt:P52424,SwissProt:Q05728,TAIR:AT3G55010.1,TIGRFAMs:TIGR00878,TrEMBL:A5BS32,TrEMBL:B9RNH2,TrEMBL:D7U2F7;Derives_from=GSCOCT00001337001;Name=Cc11_g04240;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004641,GO:0005737,GO:0006189,CC_EC_number:6.3.3.1,PRODUCT:Phosphoribosylformylglycinamidine cyclo-ligase%2C chloroplastic/mitochondrial,CC_functional_completeness:complete,CC_gene:PUR5,CC_gene:purM;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001337001~ Phosphoribosylformylglycinamidine cyclo-ligase%2C chloroplastic/mitochondrial~ PUR5~ complete;original_location=complement(join(139043..139397%2C136773..136870%2C136601..136702%2C136454..136513%2C135749..135921%2C135538..135640%2C135301..135459%2C134971..135141));owner=coffea | |
| 58624 chr11 manual_curation exon 16905146 16905230 . - . Parent=GSCOCT00001337001 | |
| 58625 chr11 manual_curation exon 16905324 16905409 . - . Parent=GSCOCT00001337001 | |
| 58626 chr11 manual_curation exon 16899525 16899922 . - . Parent=GSCOCT00001337001 | |
| 58627 chr11 manual_curation exon 16900082 16900240 . - . Parent=GSCOCT00001337001 | |
| 58628 chr11 manual_curation exon 16900319 16900421 . - . Parent=GSCOCT00001337001 | |
| 58629 chr11 manual_curation exon 16900530 16900702 . - . Parent=GSCOCT00001337001 | |
| 58630 chr11 manual_curation exon 16901235 16901294 . - . Parent=GSCOCT00001337001 | |
| 58631 chr11 manual_curation exon 16901382 16901483 . - . Parent=GSCOCT00001337001 | |
| 58632 chr11 manual_curation exon 16901554 16901651 . - . Parent=GSCOCT00001337001 | |
| 58633 chr11 manual_curation exon 16903824 16904209 . - . Parent=GSCOCT00001337001 | |
| 58634 chr11 manual_curation CDS 16899752 16899922 . - 0 Parent=GSCOCT00001337001 | |
| 58635 chr11 manual_curation CDS 16900082 16900240 . - 0 Parent=GSCOCT00001337001 | |
| 58636 chr11 manual_curation CDS 16900319 16900421 . - 2 Parent=GSCOCT00001337001 | |
| 58637 chr11 manual_curation CDS 16900530 16900702 . - 0 Parent=GSCOCT00001337001 | |
| 58638 chr11 manual_curation CDS 16901235 16901294 . - 0 Parent=GSCOCT00001337001 | |
| 58639 chr11 manual_curation CDS 16901382 16901483 . - 0 Parent=GSCOCT00001337001 | |
| 58640 chr11 manual_curation CDS 16901554 16901651 . - 1 Parent=GSCOCT00001337001 | |
| 58641 chr11 manual_curation CDS 16903824 16904178 . - 0 Parent=GSCOCT00001337001 | |
| 58642 chr11 manual_curation gene 16968226 16976535 . + . ID=GSCOCG00001341001;Name=Cc11_g04250 | |
| 58643 chr11 manual_curation mRNA 16968226 16976535 . + . ID=GSCOCT00001341001;Parent=GSCOCG00001341001;Name=Cc11_g04250 | |
| 58644 chr11 manual_curation polypeptide 16969141 16976147 . + . ID=GSCOCP00001341001;Dbxref=InterPro:IPR013878,InterPro:IPR016024,PFAM:PF08569,SUPERFAMILY:SSF48371,SwissProt:Q9FGK3,SwissProt:Q9M0M4,SwissProt:Q9Y376,TAIR:AT4G17270.1,TAIR:AT5G18940.1,TAIR:AT5G47540.1,TrEMBL:B9HY89,TrEMBL:D7T6N8,TrEMBL:Q8L9L9;Derives_from=GSCOCT00001341001;Name=Cc11_g04250;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:Putative MO25-like protein At5g47540,CC_functional_completeness:complete,CC_gene:At5g47540,CC_gene:At4g17270,CC_gene:CAB39;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001341001~ Putative MO25-like protein At5g47540~ At5g47540~ complete;original_location=join(204360..204482%2C206283..206447%2C206538..206656%2C207973..208047%2C208523..208616%2C208709..208768%2C208953..209018%2C209099..209197%2C209884..209928%2C211172..211366);owner=coffea | |
| 58645 chr11 manual_curation exon 16976328 16976535 . + . Parent=GSCOCT00001341001 | |
| 58646 chr11 manual_curation exon 16968226 16969263 . + . Parent=GSCOCT00001341001 | |
| 58647 chr11 manual_curation exon 16971064 16971228 . + . Parent=GSCOCT00001341001 | |
| 58648 chr11 manual_curation exon 16971319 16971437 . + . Parent=GSCOCT00001341001 | |
| 58649 chr11 manual_curation exon 16972754 16972828 . + . Parent=GSCOCT00001341001 | |
| 58650 chr11 manual_curation exon 16973304 16973397 . + . Parent=GSCOCT00001341001 | |
| 58651 chr11 manual_curation exon 16973490 16973549 . + . Parent=GSCOCT00001341001 | |
| 58652 chr11 manual_curation exon 16973734 16973799 . + . Parent=GSCOCT00001341001 | |
| 58653 chr11 manual_curation exon 16973880 16973978 . + . Parent=GSCOCT00001341001 | |
| 58654 chr11 manual_curation exon 16974665 16974709 . + . Parent=GSCOCT00001341001 | |
| 58655 chr11 manual_curation exon 16975953 16976254 . + . Parent=GSCOCT00001341001 | |
| 58656 chr11 manual_curation CDS 16969141 16969263 . + 0 Parent=GSCOCT00001341001 | |
| 58657 chr11 manual_curation CDS 16971064 16971228 . + 0 Parent=GSCOCT00001341001 | |
| 58658 chr11 manual_curation CDS 16971319 16971437 . + 0 Parent=GSCOCT00001341001 | |
| 58659 chr11 manual_curation CDS 16972754 16972828 . + 2 Parent=GSCOCT00001341001 | |
| 58660 chr11 manual_curation CDS 16973304 16973397 . + 2 Parent=GSCOCT00001341001 | |
| 58661 chr11 manual_curation CDS 16973490 16973549 . + 0 Parent=GSCOCT00001341001 | |
| 58662 chr11 manual_curation CDS 16973734 16973799 . + 0 Parent=GSCOCT00001341001 | |
| 58663 chr11 manual_curation CDS 16973880 16973978 . + 0 Parent=GSCOCT00001341001 | |
| 58664 chr11 manual_curation CDS 16974665 16974709 . + 0 Parent=GSCOCT00001341001 | |
| 58665 chr11 manual_curation CDS 16975953 16976147 . + 0 Parent=GSCOCT00001341001 | |
| 58666 chr11 manual_curation gene 16992092 16994001 . + . ID=GSCOCG00001342001;Name=Cc11_g04260 | |
| 58667 chr11 manual_curation mRNA 16992092 16994001 . + . ID=GSCOCT00001342001;Parent=GSCOCG00001342001;Name=Cc11_g04260 | |
| 58668 chr11 manual_curation polypeptide 16992092 16994001 . + . ID=GSCOCP00001342001;Dbxref=InterPro:IPR002085,InterPro:IPR011032,PANTHER:PTHR11695,SUPERFAMILY:SSF50129,SwissProt:Q39172,SwissProt:Q39173,SwissProt:Q6WAU0,TAIR:AT5G16970.1,TAIR:AT5G16990.1,TAIR:AT5G17000.1,TrEMBL:A5AXT8,TrEMBL:B9SER7,TrEMBL:D7TC06;Derives_from=GSCOCT00001342001;Name=Cc11_g04260;Ontology_term=CC_evidence_code:ISS,GO:0008270,GO:0016491,GO:0055114,CC_EC_number:1.3.1.74,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:P1,CC_gene:P2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001342001~ Hypothetical protein~ P1~ missing_functional_completeness;original_location=join(227311..227544%2C227657..227852%2C227986..228095%2C229032..229220);owner=coffea | |
| 58669 chr11 manual_curation exon 16992092 16992325 . + . Parent=GSCOCT00001342001 | |
| 58670 chr11 manual_curation exon 16992438 16992633 . + . Parent=GSCOCT00001342001 | |
| 58671 chr11 manual_curation exon 16992767 16992876 . + . Parent=GSCOCT00001342001 | |
| 58672 chr11 manual_curation exon 16993813 16994001 . + . Parent=GSCOCT00001342001 | |
| 58673 chr11 manual_curation CDS 16992092 16992325 . + 0 Parent=GSCOCT00001342001 | |
| 58674 chr11 manual_curation CDS 16992438 16992633 . + 0 Parent=GSCOCT00001342001 | |
| 58675 chr11 manual_curation CDS 16992767 16992876 . + 1 Parent=GSCOCT00001342001 | |
| 58676 chr11 manual_curation CDS 16993813 16994001 . + 0 Parent=GSCOCT00001342001 | |
| 58677 chr11 manual_curation gene 16996059 16998611 . + . ID=GSCOCG00001343001;Name=Cc11_g04270 | |
| 58678 chr11 manual_curation mRNA 16996059 16998611 . + . ID=GSCOCT00001343001;Parent=GSCOCG00001343001;Name=Cc11_g04270 | |
| 58679 chr11 manual_curation polypeptide 16996059 16997213 . + . ID=GSCOCP00001343001;Dbxref=InterPro:IPR001810,InterPro:IPR017451,InterPro:IPR022364,PFAM:PF00646,PROFILE:PS50181,SMART:SM00256,SUPERFAMILY:SSF81383,SwissProt:Q8GXC7,SwissProt:Q9LU24,SwissProt:Q9SU30,TAIR:AT3G06240.1,TAIR:AT3G16210.1,TAIR:AT4G12560.1,TIGRFAMs:TIGR01640,TrEMBL:B9HCS6,TrEMBL:C6TAK5,TrEMBL:I1MFB7;Derives_from=GSCOCT00001343001;Name=Cc11_g04270;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative F-box protein CPR30,CC_functional_completeness:complete,CC_gene:CPR30,CC_gene:At3g16210,CC_gene:At3g06240;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001343001~ Putative F-box protein CPR30~ CPR30~ complete;original_location=231278..232432;owner=coffea | |
| 58680 chr11 manual_curation exon 16996059 16998611 . + . Parent=GSCOCT00001343001 | |
| 58681 chr11 manual_curation CDS 16996059 16997213 . + 0 Parent=GSCOCT00001343001 | |
| 58682 chr11 manual_curation gene 16998671 17001498 . - . ID=GSCOCG00001344001;Name=Cc11_g04280 | |
| 58683 chr11 manual_curation mRNA 16998671 17001498 . - . ID=GSCOCT00001344001;Parent=GSCOCG00001344001;Name=Cc11_g04280 | |
| 58684 chr11 manual_curation polypeptide 16998671 17001498 . - . ID=GSCOCP00001344001;Dbxref=TAIR:AT3G04500.1,TrEMBL:A5B7R7,TrEMBL:F6HBY9,TrEMBL:I1LG02;Derives_from=GSCOCT00001344001;Name=Cc11_g04280;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001344001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=complement(join(236478..236717%2C234622..234851%2C233890..233926));owner=coffea | |
| 58685 chr11 manual_curation exon 16998671 16998707 . - . Parent=GSCOCT00001344001 | |
| 58686 chr11 manual_curation exon 16999403 16999632 . - . Parent=GSCOCT00001344001 | |
| 58687 chr11 manual_curation exon 17001259 17001498 . - . Parent=GSCOCT00001344001 | |
| 58688 chr11 manual_curation CDS 16998671 16998707 . - 2 Parent=GSCOCT00001344001 | |
| 58689 chr11 manual_curation CDS 16999403 16999632 . - 0 Parent=GSCOCT00001344001 | |
| 58690 chr11 manual_curation CDS 17001259 17001498 . - 0 Parent=GSCOCT00001344001 | |
| 58691 chr11 manual_curation gene 17005023 17005481 . + . ID=GSCOCG00001346001;Name=Cc11_g04290 | |
| 58692 chr11 manual_curation mRNA 17005023 17005481 . + . ID=GSCOCT00001346001;Parent=GSCOCG00001346001;Name=Cc11_g04290 | |
| 58693 chr11 manual_curation polypeptide 17005023 17005481 . + . ID=GSCOCP00001346001;Dbxref=InterPro:IPR001810,InterPro:IPR022364,PFAM:PF00646,PROFILE:PS50181,SMART:SM00256,SUPERFAMILY:SSF81383,TrEMBL:B9SNB1,TrEMBL:D3YBB5,TrEMBL:D3YBC9;Derives_from=GSCOCT00001346001;Name=Cc11_g04290;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001346001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=240242..240700;owner=coffea | |
| 58694 chr11 manual_curation exon 17005023 17005481 . + . Parent=GSCOCT00001346001 | |
| 58695 chr11 manual_curation CDS 17005023 17005481 . + 0 Parent=GSCOCT00001346001 | |
| 58696 chr11 manual_curation gene 17009488 17010586 . - . ID=GSCOCG00001347001;Name=Cc11_g04300 | |
| 58697 chr11 manual_curation mRNA 17009488 17010586 . - . ID=GSCOCT00001347001;Parent=GSCOCG00001347001;Name=Cc11_g04300 | |
| 58698 chr11 manual_curation polypeptide 17009488 17010586 . - . ID=GSCOCP00001347001;Dbxref=InterPro:IPR004316,InterPro:IPR018169,InterPro:IPR018179,PANTHER:PTHR10791,PANTHER:PTHR10791:SF6,PFAM:PF03083,SwissProt:A2YZ24,SwissProt:Q0J349,SwissProt:Q8LBF7,TAIR:AT1G66770.1,TAIR:AT4G10850.1,TAIR:AT5G62850.1,TrEMBL:B9GI71,TrEMBL:I1HP83,TrEMBL:Q70ET6;Derives_from=GSCOCT00001347001;Name=Cc11_g04300;Ontology_term=CC_evidence_code:ISS,GO:0016020,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Bidirectional sugar transporter SWEET7b,CC_functional_completeness:fragment,CC_gene:SWEET7B,CC_gene:SWEET7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001347001~ Bidirectional sugar transporter SWEET7b~ SWEET7B~ fragment;original_location=complement(join(245765..245805%2C245507..245708%2C244985..245146%2C244707..244883));owner=coffea | |
| 58699 chr11 manual_curation exon 17009488 17009664 . - . Parent=GSCOCT00001347001 | |
| 58700 chr11 manual_curation exon 17009766 17009927 . - . Parent=GSCOCT00001347001 | |
| 58701 chr11 manual_curation exon 17010288 17010489 . - . Parent=GSCOCT00001347001 | |
| 58702 chr11 manual_curation exon 17010546 17010586 . - . Parent=GSCOCT00001347001 | |
| 58703 chr11 manual_curation CDS 17009488 17009664 . - 0 Parent=GSCOCT00001347001 | |
| 58704 chr11 manual_curation CDS 17009766 17009927 . - 0 Parent=GSCOCT00001347001 | |
| 58705 chr11 manual_curation CDS 17010288 17010489 . - 2 Parent=GSCOCT00001347001 | |
| 58706 chr11 manual_curation CDS 17010546 17010586 . - 0 Parent=GSCOCT00001347001 | |
| 58707 chr11 manual_curation gene 17044202 17048776 . - . ID=GSCOCG00001349001;Name=Cc11_g04310 | |
| 58708 chr11 manual_curation mRNA 17044202 17048776 . - . ID=GSCOCT00001349001;Parent=GSCOCG00001349001;Name=Cc11_g04310 | |
| 58709 chr11 manual_curation polypeptide 17044202 17048776 . - . ID=GSCOCP00001349001;Dbxref=InterPro:IPR004316,InterPro:IPR018169,InterPro:IPR018179,PANTHER:PTHR10791,PANTHER:PTHR10791:SF6,PFAM:PF03083,SwissProt:A2YZ24,SwissProt:Q0J349,SwissProt:Q8LBF7,TAIR:AT1G66770.1,TAIR:AT4G10850.1,TAIR:AT5G62850.1,TrEMBL:B9GI71,TrEMBL:D7LYT4,TrEMBL:D7SHU1;Derives_from=GSCOCT00001349001;Name=Cc11_g04310;Ontology_term=CC_evidence_code:ISS,GO:0016020,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Putative Bidirectional sugar transporter SWEET7,CC_functional_completeness:modules,CC_gene:SWEET7,CC_gene:SWEET7B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001349001~ Putative Bidirectional sugar transporter SWEET7~ SWEET7~ modules;original_location=complement(join(283739..283995%2C281248..281467%2C279977..280138%2C279763..279882%2C279421..279573));owner=coffea | |
| 58710 chr11 manual_curation exon 17044202 17044354 . - . Parent=GSCOCT00001349001 | |
| 58711 chr11 manual_curation exon 17044544 17044663 . - . Parent=GSCOCT00001349001 | |
| 58712 chr11 manual_curation exon 17044758 17044919 . - . Parent=GSCOCT00001349001 | |
| 58713 chr11 manual_curation exon 17046029 17046248 . - . Parent=GSCOCT00001349001 | |
| 58714 chr11 manual_curation exon 17048520 17048776 . - . Parent=GSCOCT00001349001 | |
| 58715 chr11 manual_curation CDS 17044202 17044354 . - 0 Parent=GSCOCT00001349001 | |
| 58716 chr11 manual_curation CDS 17044544 17044663 . - 0 Parent=GSCOCT00001349001 | |
| 58717 chr11 manual_curation CDS 17044758 17044919 . - 0 Parent=GSCOCT00001349001 | |
| 58718 chr11 manual_curation CDS 17046029 17046248 . - 2 Parent=GSCOCT00001349001 | |
| 58719 chr11 manual_curation CDS 17048520 17048776 . - 0 Parent=GSCOCT00001349001 | |
| 58720 chr11 manual_curation gene 17056309 17064113 . + . ID=GSCOCG00001351001;Name=Cc11_g04320 | |
| 58721 chr11 manual_curation mRNA 17056309 17064113 . + . ID=GSCOCT00001351001;Parent=GSCOCG00001351001;Name=Cc11_g04320 | |
| 58722 chr11 manual_curation polypeptide 17058727 17063758 . + . ID=GSCOCP00001351001;Dbxref=GENE3D:G3DSA:3.40.640.10,InterPro:IPR004839,InterPro:IPR015421,InterPro:IPR015424,PFAM:PF00155,SUPERFAMILY:SSF53383,SwissProt:O35704,SwissProt:O54695,SwissProt:Q55FL5,TAIR:AT3G48780.1,TAIR:AT4G36480.1,TAIR:AT5G23670.1,TrEMBL:D7TB41,TrEMBL:I1M8P8,TrEMBL:I1MXL8;Derives_from=GSCOCT00001351001;Name=Cc11_g04320;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0009058,GO:0030170,CC_EC_number:2.3.1.50,PRODUCT:Putative Serine palmitoyltransferase 1,CC_functional_completeness:complete,CC_gene:SPTLC1,CC_gene:Sptlc1,CC_gene:sptA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001351001~ Putative Serine palmitoyltransferase 1~ SPTLC1~ complete;original_location=join(293946..294051%2C294130..294224%2C295232..295323%2C295709..295802%2C295890..295962%2C296068..296200%2C296750..296924%2C297819..297959%2C298038..298133%2C298295..298436%2C298523..298650%2C298801..298977);owner=coffea | |
| 58723 chr11 manual_curation exon 17056309 17056348 . + . Parent=GSCOCT00001351001 | |
| 58724 chr11 manual_curation exon 17058683 17058832 . + . Parent=GSCOCT00001351001 | |
| 58725 chr11 manual_curation exon 17058911 17059005 . + . Parent=GSCOCT00001351001 | |
| 58726 chr11 manual_curation exon 17060013 17060104 . + . Parent=GSCOCT00001351001 | |
| 58727 chr11 manual_curation exon 17060490 17060583 . + . Parent=GSCOCT00001351001 | |
| 58728 chr11 manual_curation exon 17060671 17060743 . + . Parent=GSCOCT00001351001 | |
| 58729 chr11 manual_curation exon 17060849 17060981 . + . Parent=GSCOCT00001351001 | |
| 58730 chr11 manual_curation exon 17061531 17061705 . + . Parent=GSCOCT00001351001 | |
| 58731 chr11 manual_curation exon 17062600 17062740 . + . Parent=GSCOCT00001351001 | |
| 58732 chr11 manual_curation exon 17062819 17062914 . + . Parent=GSCOCT00001351001 | |
| 58733 chr11 manual_curation exon 17063076 17063217 . + . Parent=GSCOCT00001351001 | |
| 58734 chr11 manual_curation exon 17063304 17063431 . + . Parent=GSCOCT00001351001 | |
| 58735 chr11 manual_curation exon 17063582 17064113 . + . Parent=GSCOCT00001351001 | |
| 58736 chr11 manual_curation CDS 17058727 17058832 . + 0 Parent=GSCOCT00001351001 | |
| 58737 chr11 manual_curation CDS 17058911 17059005 . + 1 Parent=GSCOCT00001351001 | |
| 58738 chr11 manual_curation CDS 17060013 17060104 . + 0 Parent=GSCOCT00001351001 | |
| 58739 chr11 manual_curation CDS 17060490 17060583 . + 2 Parent=GSCOCT00001351001 | |
| 58740 chr11 manual_curation CDS 17060671 17060743 . + 0 Parent=GSCOCT00001351001 | |
| 58741 chr11 manual_curation CDS 17060849 17060981 . + 1 Parent=GSCOCT00001351001 | |
| 58742 chr11 manual_curation CDS 17061531 17061705 . + 2 Parent=GSCOCT00001351001 | |
| 58743 chr11 manual_curation CDS 17062600 17062740 . + 0 Parent=GSCOCT00001351001 | |
| 58744 chr11 manual_curation CDS 17062819 17062914 . + 0 Parent=GSCOCT00001351001 | |
| 58745 chr11 manual_curation CDS 17063076 17063217 . + 0 Parent=GSCOCT00001351001 | |
| 58746 chr11 manual_curation CDS 17063304 17063431 . + 1 Parent=GSCOCT00001351001 | |
| 58747 chr11 manual_curation CDS 17063582 17063758 . + 0 Parent=GSCOCT00001351001 | |
| 58748 chr11 manual_curation gene 17081204 17084659 . + . ID=GSCOCG00001353001;Name=Cc11_g04330 | |
| 58749 chr11 manual_curation mRNA 17081204 17084659 . + . ID=GSCOCT00001353001;Parent=GSCOCG00001353001;Name=Cc11_g04330 | |
| 58750 chr11 manual_curation polypeptide 17081204 17081965 . + . ID=GSCOCP00001353001;Derives_from=GSCOCT00001353001;Name=Cc11_g04330;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001353001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(316423..316549%2C316732..316792%2C317082..317184);owner=coffea | |
| 58751 chr11 manual_curation exon 17082970 17083146 . + . Parent=GSCOCT00001353001 | |
| 58752 chr11 manual_curation exon 17083562 17083657 . + . Parent=GSCOCT00001353001 | |
| 58753 chr11 manual_curation exon 17083755 17083871 . + . Parent=GSCOCT00001353001 | |
| 58754 chr11 manual_curation exon 17084566 17084659 . + . Parent=GSCOCT00001353001 | |
| 58755 chr11 manual_curation exon 17081204 17081330 . + . Parent=GSCOCT00001353001 | |
| 58756 chr11 manual_curation exon 17081513 17081573 . + . Parent=GSCOCT00001353001 | |
| 58757 chr11 manual_curation exon 17081863 17082008 . + . Parent=GSCOCT00001353001 | |
| 58758 chr11 manual_curation CDS 17081204 17081330 . + 0 Parent=GSCOCT00001353001 | |
| 58759 chr11 manual_curation CDS 17081513 17081573 . + 1 Parent=GSCOCT00001353001 | |
| 58760 chr11 manual_curation CDS 17081863 17081965 . + 2 Parent=GSCOCT00001353001 | |
| 58761 chr11 manual_curation gene 17103456 17117245 . - . ID=GSCOCG00001355001;Name=Cc11_g04340 | |
| 58762 chr11 manual_curation mRNA 17103456 17117245 . - . ID=GSCOCT00001355001;Parent=GSCOCG00001355001;Name=Cc11_g04340 | |
| 58763 chr11 manual_curation polypeptide 17103639 17117245 . - . ID=GSCOCP00001355001;Dbxref=TAIR:AT4G31430.2,TrEMBL:B9SPP2,TrEMBL:F6H3A9,TrEMBL:G7JCC8;Derives_from=GSCOCT00001355001;Name=Cc11_g04340;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001355001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=complement(join(352200..352464%2C350690..350715%2C347617..347735%2C346981..347084%2C346774..346904%2C345222..345413%2C344190..344466%2C343987..344066%2C343707..343794%2C339275..339371%2C338858..339197));owner=coffea | |
| 58764 chr11 manual_curation exon 17103456 17103978 . - . Parent=GSCOCT00001355001 | |
| 58765 chr11 manual_curation exon 17104056 17104152 . - . Parent=GSCOCT00001355001 | |
| 58766 chr11 manual_curation exon 17108488 17108575 . - . Parent=GSCOCT00001355001 | |
| 58767 chr11 manual_curation exon 17108768 17108847 . - . Parent=GSCOCT00001355001 | |
| 58768 chr11 manual_curation exon 17108971 17109247 . - . Parent=GSCOCT00001355001 | |
| 58769 chr11 manual_curation exon 17110003 17110194 . - . Parent=GSCOCT00001355001 | |
| 58770 chr11 manual_curation exon 17111555 17111685 . - . Parent=GSCOCT00001355001 | |
| 58771 chr11 manual_curation exon 17111762 17111865 . - . Parent=GSCOCT00001355001 | |
| 58772 chr11 manual_curation exon 17112398 17112516 . - . Parent=GSCOCT00001355001 | |
| 58773 chr11 manual_curation exon 17115471 17115496 . - . Parent=GSCOCT00001355001 | |
| 58774 chr11 manual_curation exon 17116981 17117245 . - . Parent=GSCOCT00001355001 | |
| 58775 chr11 manual_curation CDS 17103639 17103978 . - 2 Parent=GSCOCT00001355001 | |
| 58776 chr11 manual_curation CDS 17104056 17104152 . - 1 Parent=GSCOCT00001355001 | |
| 58777 chr11 manual_curation CDS 17108488 17108575 . - 0 Parent=GSCOCT00001355001 | |
| 58778 chr11 manual_curation CDS 17108768 17108847 . - 1 Parent=GSCOCT00001355001 | |
| 58779 chr11 manual_curation CDS 17108971 17109247 . - 0 Parent=GSCOCT00001355001 | |
| 58780 chr11 manual_curation CDS 17110003 17110194 . - 0 Parent=GSCOCT00001355001 | |
| 58781 chr11 manual_curation CDS 17111555 17111685 . - 1 Parent=GSCOCT00001355001 | |
| 58782 chr11 manual_curation CDS 17111762 17111865 . - 2 Parent=GSCOCT00001355001 | |
| 58783 chr11 manual_curation CDS 17112398 17112516 . - 0 Parent=GSCOCT00001355001 | |
| 58784 chr11 manual_curation CDS 17115471 17115496 . - 1 Parent=GSCOCT00001355001 | |
| 58785 chr11 manual_curation CDS 17116981 17117245 . - 0 Parent=GSCOCT00001355001 | |
| 58786 chr11 manual_curation gene 17317624 17319264 . + . ID=GSCOCG00001360001;Name=Cc11_g04350 | |
| 58787 chr11 manual_curation mRNA 17317624 17319264 . + . ID=GSCOCT00001360001;Parent=GSCOCG00001360001;Name=Cc11_g04350 | |
| 58788 chr11 manual_curation polypeptide 17317866 17318054 . + . ID=GSCOCP00001360001;Derives_from=GSCOCT00001360001;Name=Cc11_g04350;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001360001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=553085..553273;owner=coffea | |
| 58789 chr11 manual_curation exon 17317624 17319264 . + . Parent=GSCOCT00001360001 | |
| 58790 chr11 manual_curation CDS 17317866 17318054 . + 0 Parent=GSCOCT00001360001 | |
| 58791 chr11 manual_curation gene 17329253 17330826 . - . ID=GSCOCG00001361001;Name=Cc11_g04360 | |
| 58792 chr11 manual_curation mRNA 17329253 17330826 . - . ID=GSCOCT00001361001;Parent=GSCOCG00001361001;Name=Cc11_g04360 | |
| 58793 chr11 manual_curation polypeptide 17329253 17330826 . - . ID=GSCOCP00001361001;Dbxref=GENE3D:G3DSA:2.160.20.10,InterPro:IPR000743,InterPro:IPR006626,InterPro:IPR011050,InterPro:IPR012334,PFAM:PF00295,PROSITE:PS00502,SMART:SM00710,SUPERFAMILY:SSF51126,SwissProt:Q05967,SwissProt:Q39766,SwissProt:Q39786,TAIR:AT3G07820.1,TAIR:AT3G07830.1,TAIR:AT3G07840.1,TrEMBL:B9N1P4,TrEMBL:Q9MBB8,TrEMBL:Q9MBB9;Derives_from=GSCOCT00001361001;Name=Cc11_g04360;Ontology_term=CC_evidence_code:ISS,GO:0004650,GO:0005975,CC_EC_number:3.2.1.67,PRODUCT:Polygalacturonase,CC_functional_completeness:complete,CC_gene:PG1,CC_gene:G9;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001361001~ Polygalacturonase~ PG1~ complete;original_location=complement(join(565914..566045%2C565444..565755%2C564822..565337%2C564472..564726));owner=coffea | |
| 58794 chr11 manual_curation exon 17329253 17329507 . - . Parent=GSCOCT00001361001 | |
| 58795 chr11 manual_curation exon 17329603 17330118 . - . Parent=GSCOCT00001361001 | |
| 58796 chr11 manual_curation exon 17330225 17330536 . - . Parent=GSCOCT00001361001 | |
| 58797 chr11 manual_curation exon 17330695 17330826 . - . Parent=GSCOCT00001361001 | |
| 58798 chr11 manual_curation CDS 17329253 17329507 . - 0 Parent=GSCOCT00001361001 | |
| 58799 chr11 manual_curation CDS 17329603 17330118 . - 0 Parent=GSCOCT00001361001 | |
| 58800 chr11 manual_curation CDS 17330225 17330536 . - 0 Parent=GSCOCT00001361001 | |
| 58801 chr11 manual_curation CDS 17330695 17330826 . - 0 Parent=GSCOCT00001361001 | |
| 58802 chr11 manual_curation gene 17392728 17393719 . - . ID=GSCOCG00004776001;Name=Cc11_g04370 | |
| 58803 chr11 manual_curation mRNA 17392728 17393719 . - . ID=GSCOCT00004776001;Parent=GSCOCG00004776001;Name=Cc11_g04370 | |
| 58804 chr11 manual_curation polypeptide 17392728 17393719 . - . ID=GSCOCP00004776001;Dbxref=InterPro:IPR015633,PANTHER:PTHR12081,SwissProt:Q9FNY0,SwissProt:Q9FV70,SwissProt:Q9FV71,TAIR:AT1G47870.1,TAIR:AT2G36010.2,TAIR:AT5G22220.2,TrEMBL:B9SCZ6,TrEMBL:D7TH52,TrEMBL:Q9FNS0;Derives_from=GSCOCT00004776001;Name=Cc11_g04370;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Transcription factor E2FA,CC_functional_completeness:fragment,CC_gene:E2FA,CC_gene:E2FB,CC_gene:E2FC;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004776001~ Transcription factor E2FA~ E2FA~ fragment;original_location=complement(join(23127..23167%2C22903..22989%2C22778..22822%2C22634..22682%2C22424..22486%2C22176..22256));owner=coffea | |
| 58805 chr11 manual_curation exon 17392728 17392808 . - . Parent=GSCOCT00004776001 | |
| 58806 chr11 manual_curation exon 17392976 17393038 . - . Parent=GSCOCT00004776001 | |
| 58807 chr11 manual_curation exon 17393186 17393234 . - . Parent=GSCOCT00004776001 | |
| 58808 chr11 manual_curation exon 17393330 17393374 . - . Parent=GSCOCT00004776001 | |
| 58809 chr11 manual_curation exon 17393455 17393541 . - . Parent=GSCOCT00004776001 | |
| 58810 chr11 manual_curation exon 17393679 17393719 . - . Parent=GSCOCT00004776001 | |
| 58811 chr11 manual_curation CDS 17392728 17392808 . - 0 Parent=GSCOCT00004776001 | |
| 58812 chr11 manual_curation CDS 17392976 17393038 . - 0 Parent=GSCOCT00004776001 | |
| 58813 chr11 manual_curation CDS 17393186 17393234 . - 2 Parent=GSCOCT00004776001 | |
| 58814 chr11 manual_curation CDS 17393330 17393374 . - 2 Parent=GSCOCT00004776001 | |
| 58815 chr11 manual_curation CDS 17393455 17393541 . - 2 Parent=GSCOCT00004776001 | |
| 58816 chr11 manual_curation CDS 17393679 17393719 . - 0 Parent=GSCOCT00004776001 | |
| 58817 chr11 manual_curation gene 17401216 17402910 . - . ID=GSCOCG00004777001;Name=Cc11_g04380 | |
| 58818 chr11 manual_curation mRNA 17401216 17402910 . - . ID=GSCOCT00004777001;Parent=GSCOCG00004777001;Name=Cc11_g04380 | |
| 58819 chr11 manual_curation polypeptide 17401322 17402910 . - . ID=GSCOCP00004777001;Derives_from=GSCOCT00004777001;Name=Cc11_g04380;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004777001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(32221..32358%2C31902..32145%2C31344..31813%2C31161..31250%2C31007..31092%2C30770..30923));owner=coffea | |
| 58820 chr11 manual_curation exon 17401216 17401475 . - . Parent=GSCOCT00004777001 | |
| 58821 chr11 manual_curation exon 17401559 17401644 . - . Parent=GSCOCT00004777001 | |
| 58822 chr11 manual_curation exon 17401713 17401802 . - . Parent=GSCOCT00004777001 | |
| 58823 chr11 manual_curation exon 17401896 17402365 . - . Parent=GSCOCT00004777001 | |
| 58824 chr11 manual_curation exon 17402454 17402697 . - . Parent=GSCOCT00004777001 | |
| 58825 chr11 manual_curation exon 17402773 17402910 . - . Parent=GSCOCT00004777001 | |
| 58826 chr11 manual_curation CDS 17401322 17401475 . - 2 Parent=GSCOCT00004777001 | |
| 58827 chr11 manual_curation CDS 17401559 17401644 . - 0 Parent=GSCOCT00004777001 | |
| 58828 chr11 manual_curation CDS 17401713 17401802 . - 0 Parent=GSCOCT00004777001 | |
| 58829 chr11 manual_curation CDS 17401896 17402365 . - 1 Parent=GSCOCT00004777001 | |
| 58830 chr11 manual_curation CDS 17402454 17402697 . - 0 Parent=GSCOCT00004777001 | |
| 58831 chr11 manual_curation CDS 17402773 17402910 . - 0 Parent=GSCOCT00004777001 | |
| 58832 chr11 manual_curation gene 17404798 17407676 . - . ID=GSCOCG00004778001;Name=Cc11_g04390 | |
| 58833 chr11 manual_curation mRNA 17404798 17407676 . - . ID=GSCOCT00004778001;Parent=GSCOCG00004778001;Name=Cc11_g04390 | |
| 58834 chr11 manual_curation polypeptide 17404798 17407414 . - . ID=GSCOCP00004778001;Dbxref=TAIR:AT3G19780.1,TrEMBL:B9HGN1,TrEMBL:D7LA31,TrEMBL:Q9LT30;Derives_from=GSCOCT00004778001;Name=Cc11_g04390;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative LOCATED IN,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004778001~ Putative LOCATED IN: endomembrane system%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF179 (InterPro:IPR003774)%2C Thioredoxin fold (InterPro:IPR012335)%2C Thioredoxin-like fold (InterPro:IPR012336)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF179) (TAIR:AT1G33780.1)%3B Has 74 Blast hits to 72 proteins in 32 species: Archae - 0%3B Bacteria - 24%3B Metazoa - 11%3B Fungi - 3%3B Plants - 32%3B Viruses - 0%3B Other Eukaryotes - 4 (source: NCBI BLink).~ unknown_gene~ fragment;original_location=complement(join(36783..36862%2C36051..36331%2C34779..34838%2C34246..34685));owner=coffea | |
| 58835 chr11 manual_curation exon 17404798 17405237 . - . Parent=GSCOCT00004778001 | |
| 58836 chr11 manual_curation exon 17405331 17405390 . - . Parent=GSCOCT00004778001 | |
| 58837 chr11 manual_curation exon 17406603 17406883 . - . Parent=GSCOCT00004778001 | |
| 58838 chr11 manual_curation exon 17407335 17407676 . - . Parent=GSCOCT00004778001 | |
| 58839 chr11 manual_curation CDS 17404798 17405237 . - 1 Parent=GSCOCT00004778001 | |
| 58840 chr11 manual_curation CDS 17405331 17405390 . - 1 Parent=GSCOCT00004778001 | |
| 58841 chr11 manual_curation CDS 17406603 17406883 . - 2 Parent=GSCOCT00004778001 | |
| 58842 chr11 manual_curation CDS 17407335 17407414 . - 0 Parent=GSCOCT00004778001 | |
| 58843 chr11 manual_curation gene 17468416 17495919 . - . ID=GSCOCG00004782001;Name=Cc11_g04400 | |
| 58844 chr11 manual_curation mRNA 17468416 17495919 . - . ID=GSCOCT00004782001;Parent=GSCOCG00004782001;Name=Cc11_g04400 | |
| 58845 chr11 manual_curation polypeptide 17468794 17495919 . - . ID=GSCOCP00004782001;Dbxref=GENE3D:G3DSA:1.25.10.10,InterPro:IPR000330,InterPro:IPR000357,InterPro:IPR001650,InterPro:IPR011989,InterPro:IPR014001,InterPro:IPR014021,InterPro:IPR016024,InterPro:IPR022707,PFAM:PF00176,PFAM:PF00271,PFAM:PF02985,PFAM:PF12054,PROFILE:PS51192,PROFILE:PS51194,SMART:SM00487,SMART:SM00490,SUPERFAMILY:SSF48371,SwissProt:O14981,SwissProt:O43065,SwissProt:P32333,TAIR:AT3G06010.1,TAIR:AT3G54280.2,TAIR:AT5G63950.1,TrEMBL:B9I6D4,TrEMBL:F6I5H6,TrEMBL:I1LNP6;Derives_from=GSCOCT00004782001;Name=Cc11_g04400;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0003677,GO:0004386,GO:0005488,GO:0005524,CC_EC_number:missing_EC_number,PRODUCT:Putative TATA-binding protein-associated factor 172,CC_functional_completeness:complete,CC_gene:BTAF1,CC_gene:mot1,CC_gene:MOT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004782001~ Putative TATA-binding protein-associated factor 172~ BTAF1~ complete;original_location=complement(join(125316..125367%2C124972..125066%2C122218..122435%2C122040..122108%2C120988..121060%2C119566..119647%2C117513..117844%2C114434..114542%2C113752..114355%2C113280..113412%2C113115..113183%2C110790..111001%2C110222..110462%2C109879..110049%2C106929..107357%2C106374..106808%2C106140..106259%2C105572..106054%2C104422..104960%2C101746..102238%2C101591..101659%2C100658..100762%2C100309..100533%2C99972..100235%2C99798..99847%2C99496..99605%2C99325..99407%2C98534..98743%2C98242..98412));owner=coffea | |
| 58846 chr11 manual_curation exon 17468416 17468964 . - . Parent=GSCOCT00004782001 | |
| 58847 chr11 manual_curation exon 17469086 17469295 . - . Parent=GSCOCT00004782001 | |
| 58848 chr11 manual_curation exon 17469877 17469959 . - . Parent=GSCOCT00004782001 | |
| 58849 chr11 manual_curation exon 17470048 17470157 . - . Parent=GSCOCT00004782001 | |
| 58850 chr11 manual_curation exon 17470350 17470399 . - . Parent=GSCOCT00004782001 | |
| 58851 chr11 manual_curation exon 17470524 17470787 . - . Parent=GSCOCT00004782001 | |
| 58852 chr11 manual_curation exon 17470861 17471085 . - . Parent=GSCOCT00004782001 | |
| 58853 chr11 manual_curation exon 17471210 17471314 . - . Parent=GSCOCT00004782001 | |
| 58854 chr11 manual_curation exon 17472143 17472211 . - . Parent=GSCOCT00004782001 | |
| 58855 chr11 manual_curation exon 17472298 17472790 . - . Parent=GSCOCT00004782001 | |
| 58856 chr11 manual_curation exon 17474974 17475512 . - . Parent=GSCOCT00004782001 | |
| 58857 chr11 manual_curation exon 17476124 17476606 . - . Parent=GSCOCT00004782001 | |
| 58858 chr11 manual_curation exon 17476692 17476811 . - . Parent=GSCOCT00004782001 | |
| 58859 chr11 manual_curation exon 17476926 17477360 . - . Parent=GSCOCT00004782001 | |
| 58860 chr11 manual_curation exon 17477481 17477909 . - . Parent=GSCOCT00004782001 | |
| 58861 chr11 manual_curation exon 17480431 17480601 . - . Parent=GSCOCT00004782001 | |
| 58862 chr11 manual_curation exon 17480774 17481014 . - . Parent=GSCOCT00004782001 | |
| 58863 chr11 manual_curation exon 17481342 17481553 . - . Parent=GSCOCT00004782001 | |
| 58864 chr11 manual_curation exon 17483667 17483735 . - . Parent=GSCOCT00004782001 | |
| 58865 chr11 manual_curation exon 17483832 17483964 . - . Parent=GSCOCT00004782001 | |
| 58866 chr11 manual_curation exon 17484304 17484907 . - . Parent=GSCOCT00004782001 | |
| 58867 chr11 manual_curation exon 17484986 17485094 . - . Parent=GSCOCT00004782001 | |
| 58868 chr11 manual_curation exon 17488065 17488396 . - . Parent=GSCOCT00004782001 | |
| 58869 chr11 manual_curation exon 17490118 17490199 . - . Parent=GSCOCT00004782001 | |
| 58870 chr11 manual_curation exon 17491540 17491612 . - . Parent=GSCOCT00004782001 | |
| 58871 chr11 manual_curation exon 17492592 17492660 . - . Parent=GSCOCT00004782001 | |
| 58872 chr11 manual_curation exon 17492770 17492987 . - . Parent=GSCOCT00004782001 | |
| 58873 chr11 manual_curation exon 17495524 17495618 . - . Parent=GSCOCT00004782001 | |
| 58874 chr11 manual_curation exon 17495868 17495919 . - . Parent=GSCOCT00004782001 | |
| 58875 chr11 manual_curation CDS 17468794 17468964 . - 0 Parent=GSCOCT00004782001 | |
| 58876 chr11 manual_curation CDS 17469086 17469295 . - 0 Parent=GSCOCT00004782001 | |
| 58877 chr11 manual_curation CDS 17469877 17469959 . - 1 Parent=GSCOCT00004782001 | |
| 58878 chr11 manual_curation CDS 17470048 17470157 . - 2 Parent=GSCOCT00004782001 | |
| 58879 chr11 manual_curation CDS 17470350 17470399 . - 0 Parent=GSCOCT00004782001 | |
| 58880 chr11 manual_curation CDS 17470524 17470787 . - 0 Parent=GSCOCT00004782001 | |
| 58881 chr11 manual_curation CDS 17470861 17471085 . - 0 Parent=GSCOCT00004782001 | |
| 58882 chr11 manual_curation CDS 17471210 17471314 . - 0 Parent=GSCOCT00004782001 | |
| 58883 chr11 manual_curation CDS 17472143 17472211 . - 0 Parent=GSCOCT00004782001 | |
| 58884 chr11 manual_curation CDS 17472298 17472790 . - 2 Parent=GSCOCT00004782001 | |
| 58885 chr11 manual_curation CDS 17474974 17475512 . - 0 Parent=GSCOCT00004782001 | |
| 58886 chr11 manual_curation CDS 17476124 17476606 . - 0 Parent=GSCOCT00004782001 | |
| 58887 chr11 manual_curation CDS 17476692 17476811 . - 0 Parent=GSCOCT00004782001 | |
| 58888 chr11 manual_curation CDS 17476926 17477360 . - 0 Parent=GSCOCT00004782001 | |
| 58889 chr11 manual_curation CDS 17477481 17477909 . - 0 Parent=GSCOCT00004782001 | |
| 58890 chr11 manual_curation CDS 17480431 17480601 . - 0 Parent=GSCOCT00004782001 | |
| 58891 chr11 manual_curation CDS 17480774 17481014 . - 2 Parent=GSCOCT00004782001 | |
| 58892 chr11 manual_curation CDS 17481342 17481553 . - 0 Parent=GSCOCT00004782001 | |
| 58893 chr11 manual_curation CDS 17483667 17483735 . - 0 Parent=GSCOCT00004782001 | |
| 58894 chr11 manual_curation CDS 17483832 17483964 . - 2 Parent=GSCOCT00004782001 | |
| 58895 chr11 manual_curation CDS 17484304 17484907 . - 1 Parent=GSCOCT00004782001 | |
| 58896 chr11 manual_curation CDS 17484986 17485094 . - 0 Parent=GSCOCT00004782001 | |
| 58897 chr11 manual_curation CDS 17488065 17488396 . - 1 Parent=GSCOCT00004782001 | |
| 58898 chr11 manual_curation CDS 17490118 17490199 . - 0 Parent=GSCOCT00004782001 | |
| 58899 chr11 manual_curation CDS 17491540 17491612 . - 2 Parent=GSCOCT00004782001 | |
| 58900 chr11 manual_curation CDS 17492592 17492660 . - 2 Parent=GSCOCT00004782001 | |
| 58901 chr11 manual_curation CDS 17492770 17492987 . - 0 Parent=GSCOCT00004782001 | |
| 58902 chr11 manual_curation CDS 17495524 17495618 . - 1 Parent=GSCOCT00004782001 | |
| 58903 chr11 manual_curation CDS 17495868 17495919 . - 0 Parent=GSCOCT00004782001 | |
| 58904 chr11 manual_curation gene 17563392 17570965 . + . ID=GSCOCG00004785001;Name=Cc11_g04410 | |
| 58905 chr11 manual_curation mRNA 17563392 17570965 . + . ID=GSCOCT00004785001;Parent=GSCOCG00004785001;Name=Cc11_g04410 | |
| 58906 chr11 manual_curation polypeptide 17563392 17570666 . + . ID=GSCOCP00004785001;Dbxref=InterPro:IPR006076,PFAM:PF01266,SwissProt:Q3MHH6,SwissProt:Q3U4I7,SwissProt:Q68FT3,TAIR:AT5G49555.1,TrEMBL:B9HEZ9,TrEMBL:B9S6H4,TrEMBL:D7SPD9;Derives_from=GSCOCT00004785001;Name=Cc11_g04410;Ontology_term=CC_evidence_code:ISS,GO:0016491,CC_EC_number:missing_EC_number,PRODUCT:Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2,CC_functional_completeness:complete,CC_gene:Pyroxd2,CC_gene:PYROXD2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004785001~ Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2~ Pyroxd2~ complete;original_location=join(192840..193120%2C193190..193351%2C193730..193909%2C194104..194161%2C194487..194537%2C194887..194969%2C195396..195483%2C195999..196040%2C196133..196207%2C197051..197119%2C197627..197742%2C198295..198407%2C199105..199184%2C199411..199531%2C199836..199902%2C199991..200114);owner=coffea | |
| 58907 chr11 manual_curation exon 17563392 17563672 . + . Parent=GSCOCT00004785001 | |
| 58908 chr11 manual_curation exon 17563742 17563903 . + . Parent=GSCOCT00004785001 | |
| 58909 chr11 manual_curation exon 17564282 17564461 . + . Parent=GSCOCT00004785001 | |
| 58910 chr11 manual_curation exon 17564656 17564713 . + . Parent=GSCOCT00004785001 | |
| 58911 chr11 manual_curation exon 17565039 17565089 . + . Parent=GSCOCT00004785001 | |
| 58912 chr11 manual_curation exon 17565439 17565521 . + . Parent=GSCOCT00004785001 | |
| 58913 chr11 manual_curation exon 17565948 17566035 . + . Parent=GSCOCT00004785001 | |
| 58914 chr11 manual_curation exon 17566551 17566592 . + . Parent=GSCOCT00004785001 | |
| 58915 chr11 manual_curation exon 17566685 17566759 . + . Parent=GSCOCT00004785001 | |
| 58916 chr11 manual_curation exon 17567603 17567671 . + . Parent=GSCOCT00004785001 | |
| 58917 chr11 manual_curation exon 17568179 17568294 . + . Parent=GSCOCT00004785001 | |
| 58918 chr11 manual_curation exon 17568847 17568959 . + . Parent=GSCOCT00004785001 | |
| 58919 chr11 manual_curation exon 17569657 17569736 . + . Parent=GSCOCT00004785001 | |
| 58920 chr11 manual_curation exon 17569963 17570083 . + . Parent=GSCOCT00004785001 | |
| 58921 chr11 manual_curation exon 17570388 17570454 . + . Parent=GSCOCT00004785001 | |
| 58922 chr11 manual_curation exon 17570543 17570965 . + . Parent=GSCOCT00004785001 | |
| 58923 chr11 manual_curation CDS 17563392 17563672 . + 0 Parent=GSCOCT00004785001 | |
| 58924 chr11 manual_curation CDS 17563742 17563903 . + 2 Parent=GSCOCT00004785001 | |
| 58925 chr11 manual_curation CDS 17564282 17564461 . + 2 Parent=GSCOCT00004785001 | |
| 58926 chr11 manual_curation CDS 17564656 17564713 . + 2 Parent=GSCOCT00004785001 | |
| 58927 chr11 manual_curation CDS 17565039 17565089 . + 0 Parent=GSCOCT00004785001 | |
| 58928 chr11 manual_curation CDS 17565439 17565521 . + 0 Parent=GSCOCT00004785001 | |
| 58929 chr11 manual_curation CDS 17565948 17566035 . + 2 Parent=GSCOCT00004785001 | |
| 58930 chr11 manual_curation CDS 17566551 17566592 . + 0 Parent=GSCOCT00004785001 | |
| 58931 chr11 manual_curation CDS 17566685 17566759 . + 0 Parent=GSCOCT00004785001 | |
| 58932 chr11 manual_curation CDS 17567603 17567671 . + 0 Parent=GSCOCT00004785001 | |
| 58933 chr11 manual_curation CDS 17568179 17568294 . + 0 Parent=GSCOCT00004785001 | |
| 58934 chr11 manual_curation CDS 17568847 17568959 . + 2 Parent=GSCOCT00004785001 | |
| 58935 chr11 manual_curation CDS 17569657 17569736 . + 1 Parent=GSCOCT00004785001 | |
| 58936 chr11 manual_curation CDS 17569963 17570083 . + 0 Parent=GSCOCT00004785001 | |
| 58937 chr11 manual_curation CDS 17570388 17570454 . + 1 Parent=GSCOCT00004785001 | |
| 58938 chr11 manual_curation CDS 17570543 17570666 . + 2 Parent=GSCOCT00004785001 | |
| 58939 chr11 manual_curation gene 17574363 17579820 . - . ID=GSCOCG00004786001;Name=Cc11_g04420 | |
| 58940 chr11 manual_curation mRNA 17574363 17579820 . - . ID=GSCOCT00004786001;Parent=GSCOCG00004786001;Name=Cc11_g04420 | |
| 58941 chr11 manual_curation polypeptide 17575042 17579820 . - . ID=GSCOCP00004786001;Derives_from=GSCOCT00004786001;Name=Cc11_g04420;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004786001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(209211..209268%2C209039..209117%2C208813..208945%2C208599..208719%2C204596..204631%2C204490..204509));owner=coffea | |
| 58942 chr11 manual_curation exon 17574363 17575061 . - . Parent=GSCOCT00004786001 | |
| 58943 chr11 manual_curation exon 17575148 17575183 . - . Parent=GSCOCT00004786001 | |
| 58944 chr11 manual_curation exon 17579151 17579271 . - . Parent=GSCOCT00004786001 | |
| 58945 chr11 manual_curation exon 17579365 17579497 . - . Parent=GSCOCT00004786001 | |
| 58946 chr11 manual_curation exon 17579591 17579669 . - . Parent=GSCOCT00004786001 | |
| 58947 chr11 manual_curation exon 17579763 17579820 . - . Parent=GSCOCT00004786001 | |
| 58948 chr11 manual_curation CDS 17575042 17575061 . - 1 Parent=GSCOCT00004786001 | |
| 58949 chr11 manual_curation CDS 17575148 17575183 . - 1 Parent=GSCOCT00004786001 | |
| 58950 chr11 manual_curation CDS 17579151 17579271 . - 0 Parent=GSCOCT00004786001 | |
| 58951 chr11 manual_curation CDS 17579365 17579497 . - 2 Parent=GSCOCT00004786001 | |
| 58952 chr11 manual_curation CDS 17579591 17579669 . - 1 Parent=GSCOCT00004786001 | |
| 58953 chr11 manual_curation CDS 17579763 17579820 . - 0 Parent=GSCOCT00004786001 | |
| 58954 chr11 manual_curation gene 17579967 17580883 . - . ID=GSCOCG00004787001;Name=Cc11_g04430 | |
| 58955 chr11 manual_curation mRNA 17579967 17580883 . - . ID=GSCOCT00004787001;Parent=GSCOCG00004787001;Name=Cc11_g04430 | |
| 58956 chr11 manual_curation polypeptide 17579967 17580883 . - . ID=GSCOCP00004787001;Dbxref=GENE3D:G3DSA:2.40.50.140,InterPro:IPR012340,InterPro:IPR016027,SUPERFAMILY:SSF50249;Derives_from=GSCOCT00004787001;Name=Cc11_g04430;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004787001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(210182..210331%2C209596..209866%2C209415..209506));owner=coffea | |
| 58957 chr11 manual_curation exon 17579967 17580058 . - . Parent=GSCOCT00004787001 | |
| 58958 chr11 manual_curation exon 17580148 17580418 . - . Parent=GSCOCT00004787001 | |
| 58959 chr11 manual_curation exon 17580734 17580883 . - . Parent=GSCOCT00004787001 | |
| 58960 chr11 manual_curation CDS 17579967 17580058 . - 1 Parent=GSCOCT00004787001 | |
| 58961 chr11 manual_curation CDS 17580148 17580418 . - 0 Parent=GSCOCT00004787001 | |
| 58962 chr11 manual_curation CDS 17580734 17580883 . - 0 Parent=GSCOCT00004787001 | |
| 58963 chr11 manual_curation gene 17592859 17594137 . - . ID=GSCOCG00004789001;Name=Cc11_g04440 | |
| 58964 chr11 manual_curation mRNA 17592859 17594137 . - . ID=GSCOCT00004789001;Parent=GSCOCG00004789001;Name=Cc11_g04440 | |
| 58965 chr11 manual_curation polypeptide 17592859 17594137 . - . ID=GSCOCP00004789001;Dbxref=InterPro:IPR004843,InterPro:IPR006186,PANTHER:PTHR11668,PFAM:PF00149,PROSITE:PS00125,SwissProt:Q8LSN3,SwissProt:Q9LHE7,SwissProt:Q9SX52,TAIR:AT1G50370.1,TAIR:AT3G19980.1,TAIR:AT5G55260.1,TrEMBL:B7FL39,TrEMBL:B9HK17,TrEMBL:Q42912;Derives_from=GSCOCT00004789001;Name=Cc11_g04440;Ontology_term=CC_evidence_code:ISS,GO:0016787,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:FYPP,CC_gene:FYPP3,CC_gene:FYPP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004789001~ Hypothetical protein~ FYPP~ missing_functional_completeness;original_location=complement(join(223487..223585%2C222556..222666%2C222307..222462));owner=coffea | |
| 58966 chr11 manual_curation exon 17592859 17593014 . - . Parent=GSCOCT00004789001 | |
| 58967 chr11 manual_curation exon 17593108 17593218 . - . Parent=GSCOCT00004789001 | |
| 58968 chr11 manual_curation exon 17594039 17594137 . - . Parent=GSCOCT00004789001 | |
| 58969 chr11 manual_curation CDS 17592859 17593014 . - 0 Parent=GSCOCT00004789001 | |
| 58970 chr11 manual_curation CDS 17593108 17593218 . - 0 Parent=GSCOCT00004789001 | |
| 58971 chr11 manual_curation CDS 17594039 17594137 . - 0 Parent=GSCOCT00004789001 | |
| 58972 chr11 manual_curation gene 17594652 17601382 . - . ID=GSCOCG00004790001;Name=Cc11_g04450 | |
| 58973 chr11 manual_curation mRNA 17594652 17601382 . - . ID=GSCOCT00004790001;Parent=GSCOCG00004790001;Name=Cc11_g04450 | |
| 58974 chr11 manual_curation polypeptide 17595276 17601382 . - . ID=GSCOCP00004790001;Dbxref=InterPro:IPR001650,InterPro:IPR001878,InterPro:IPR011545,InterPro:IPR014001,InterPro:IPR014014,InterPro:IPR014021,PFAM:PF00270,PFAM:PF00271,PROFILE:PS50158,PROFILE:PS51192,PROFILE:PS51194,PROFILE:PS51195,SMART:SM00343,SMART:SM00487,SMART:SM00490,SwissProt:Q0E3X4,SwissProt:Q5Z6G5,SwissProt:Q9LU46,TAIR:AT1G55150.1,TAIR:AT4G33370.1,TAIR:AT5G51280.1,TrEMBL:A5B7F0,TrEMBL:B9N0D8,TrEMBL:I1JRB6;Derives_from=GSCOCT00004790001;Name=Cc11_g04450;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0004386,GO:0005524,GO:0008026,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:DEAD-box ATP-dependent RNA helicase 35,CC_functional_completeness:complete,CC_gene:RH35,CC_gene:Os02g0150100,CC_gene:Os06g0697200;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004790001~ DEAD-box ATP-dependent RNA helicase 35~ RH35~ complete;original_location=complement(join(229923..230830%2C224724..225588));owner=coffea | |
| 58975 chr11 manual_curation exon 17594652 17596140 . - . Parent=GSCOCT00004790001 | |
| 58976 chr11 manual_curation exon 17600475 17601382 . - . Parent=GSCOCT00004790001 | |
| 58977 chr11 manual_curation CDS 17595276 17596140 . - 2 Parent=GSCOCT00004790001 | |
| 58978 chr11 manual_curation CDS 17600475 17601382 . - 0 Parent=GSCOCT00004790001 | |
| 58979 chr11 manual_curation gene 17609434 17609658 . - . ID=GSCOCG00004793001;Name=Cc11_g04460 | |
| 58980 chr11 manual_curation mRNA 17609434 17609658 . - . ID=GSCOCT00004793001;Parent=GSCOCG00004793001;Name=Cc11_g04460 | |
| 58981 chr11 manual_curation polypeptide 17609434 17609658 . - . ID=GSCOCP00004793001;Dbxref=InterPro:IPR003480,PFAM:PF02458,SwissProt:Q9SND9,TAIR:AT2G39980.1,TAIR:AT5G01210.1,TAIR:AT5G42830.1,TrEMBL:B9HT03,TrEMBL:B9IG60,TrEMBL:F6HKT9,TrEMBL:I1J785;Derives_from=GSCOCT00004793001;Name=Cc11_g04460;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized acetyltransferase At3g50280,CC_functional_completeness:fragment,CC_gene:At3g50280;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004793001~ Putative Uncharacterized acetyltransferase At3g50280~ At3g50280~ fragment;original_location=complement(238882..239106);owner=coffea | |
| 58982 chr11 manual_curation exon 17609434 17609658 . - . Parent=GSCOCT00004793001 | |
| 58983 chr11 manual_curation CDS 17609434 17609658 . - 0 Parent=GSCOCT00004793001 | |
| 58984 chr11 manual_curation gene 17695436 17696382 . + . ID=GSCOCG00004798001;Name=Cc11_g04470 | |
| 58985 chr11 manual_curation mRNA 17695436 17696382 . + . ID=GSCOCT00004798001;Parent=GSCOCG00004798001;Name=Cc11_g04470 | |
| 58986 chr11 manual_curation polypeptide 17695588 17696070 . + . ID=GSCOCP00004798001;Dbxref=InterPro:IPR002068,InterPro:IPR008978,PFAM:PF00011,PROFILE:PS01031,SUPERFAMILY:SSF49764,SwissProt:P05478,SwissProt:P19243,SwissProt:P27880,TAIR:AT1G53540.1,TAIR:AT3G46230.1,TAIR:AT5G59720.1,TrEMBL:A5B2N0,TrEMBL:F6HNP2,TrEMBL:H6TB42;Derives_from=GSCOCT00004798001;Name=Cc11_g04470;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:18.5 kDa class I heat shock protein,CC_functional_completeness:complete,CC_gene:HSP18.5-C,CC_gene:HSP18.2,CC_gene:HSP18.1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004798001~ 18.5 kDa class I heat shock protein~ HSP18.5-C~ complete;original_location=join(325036..325227%2C325294..325518);owner=coffea | |
| 58987 chr11 manual_curation exon 17695436 17695779 . + . Parent=GSCOCT00004798001 | |
| 58988 chr11 manual_curation exon 17695846 17696382 . + . Parent=GSCOCT00004798001 | |
| 58989 chr11 manual_curation CDS 17695588 17695779 . + 0 Parent=GSCOCT00004798001 | |
| 58990 chr11 manual_curation CDS 17695846 17696070 . + 0 Parent=GSCOCT00004798001 | |
| 58991 chr11 manual_curation gene 17713352 17714298 . + . ID=GSCOCG00004799001;Name=Cc11_g04480 | |
| 58992 chr11 manual_curation mRNA 17713352 17714298 . + . ID=GSCOCT00004799001;Parent=GSCOCG00004799001;Name=Cc11_g04480 | |
| 58993 chr11 manual_curation polypeptide 17713504 17713986 . + . ID=GSCOCP00004799001;Dbxref=InterPro:IPR002068,InterPro:IPR008978,PFAM:PF00011,PROFILE:PS01031,SUPERFAMILY:SSF49764,SwissProt:P05478,SwissProt:P19243,SwissProt:P27880,TAIR:AT1G53540.1,TAIR:AT3G46230.1,TAIR:AT5G59720.1,TrEMBL:A5B2N0,TrEMBL:F6HNP2,TrEMBL:H6TB42;Derives_from=GSCOCT00004799001;Name=Cc11_g04480;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:18.5 kDa class I heat shock protein,CC_functional_completeness:complete,CC_gene:HSP18.5-C,CC_gene:HSP18.2,CC_gene:HSP18.1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004799001~ 18.5 kDa class I heat shock protein~ HSP18.5-C~ complete;original_location=join(342952..343143%2C343210..343434);owner=coffea | |
| 58994 chr11 manual_curation exon 17713352 17713695 . + . Parent=GSCOCT00004799001 | |
| 58995 chr11 manual_curation exon 17713762 17714298 . + . Parent=GSCOCT00004799001 | |
| 58996 chr11 manual_curation CDS 17713504 17713695 . + 0 Parent=GSCOCT00004799001 | |
| 58997 chr11 manual_curation CDS 17713762 17713986 . + 0 Parent=GSCOCT00004799001 | |
| 58998 chr11 manual_curation gene 17720509 17720712 . - . ID=GSCOCG00004800001;Name=Cc11_g04490 | |
| 58999 chr11 manual_curation mRNA 17720509 17720712 . - . ID=GSCOCT00004800001;Parent=GSCOCG00004800001;Name=Cc11_g04490 | |
| 59000 chr11 manual_curation polypeptide 17720509 17720712 . - . ID=GSCOCP00004800001;Dbxref=InterPro:IPR015724,PANTHER:PTHR22939:SF1,SwissProt:Q9FL12,TAIR:AT5G40200.1;Derives_from=GSCOCT00004800001;Name=Cc11_g04490;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:DEGP9;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004800001~ Hypothetical protein~ DEGP9~ missing_functional_completeness;original_location=complement(349957..350160);owner=coffea | |
| 59001 chr11 manual_curation exon 17720509 17720712 . - . Parent=GSCOCT00004800001 | |
| 59002 chr11 manual_curation CDS 17720509 17720712 . - 0 Parent=GSCOCT00004800001 | |
| 59003 chr11 manual_curation gene 17727595 17731293 . + . ID=GSCOCG00004802001;Name=Cc11_g04500 | |
| 59004 chr11 manual_curation mRNA 17727595 17731293 . + . ID=GSCOCT00004802001;Parent=GSCOCG00004802001;Name=Cc11_g04500 | |
| 59005 chr11 manual_curation polypeptide 17727595 17730836 . + . ID=GSCOCP00004802001;Dbxref=TAIR:AT2G44820.2,TrEMBL:A9PGB6,TrEMBL:B9I6T6,TrEMBL:D7T1A9;Derives_from=GSCOCT00004802001;Name=Cc11_g04500;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004802001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=join(357043..357151%2C359706..359776%2C359861..359947%2C360030..360284);owner=coffea | |
| 59006 chr11 manual_curation exon 17727595 17727703 . + . Parent=GSCOCT00004802001 | |
| 59007 chr11 manual_curation exon 17730258 17730328 . + . Parent=GSCOCT00004802001 | |
| 59008 chr11 manual_curation exon 17730413 17730499 . + . Parent=GSCOCT00004802001 | |
| 59009 chr11 manual_curation exon 17730582 17731293 . + . Parent=GSCOCT00004802001 | |
| 59010 chr11 manual_curation CDS 17727595 17727703 . + 0 Parent=GSCOCT00004802001 | |
| 59011 chr11 manual_curation CDS 17730258 17730328 . + 1 Parent=GSCOCT00004802001 | |
| 59012 chr11 manual_curation CDS 17730413 17730499 . + 0 Parent=GSCOCT00004802001 | |
| 59013 chr11 manual_curation CDS 17730582 17730836 . + 0 Parent=GSCOCT00004802001 | |
| 59014 chr11 manual_curation gene 17733020 17735229 . + . ID=GSCOCG00004803001;Name=Cc11_g04510 | |
| 59015 chr11 manual_curation mRNA 17733020 17735229 . + . ID=GSCOCT00004803001;Parent=GSCOCG00004803001;Name=Cc11_g04510 | |
| 59016 chr11 manual_curation polypeptide 17733087 17734905 . + . ID=GSCOCP00004803001;Dbxref=GENE3D:G3DSA:1.10.30.10,InterPro:IPR000910,InterPro:IPR009071,PFAM:PF00505,PROFILE:PS50118,SMART:SM00398,SUPERFAMILY:SSF47095,SwissProt:O49595,SwissProt:P40619,SwissProt:Q8LDF9,TAIR:AT3G51880.2,TAIR:AT4G35570.1,TAIR:AT5G23420.1,TrEMBL:A5BH75,TrEMBL:A9PB77,TrEMBL:F6HVY6;Derives_from=GSCOCT00004803001;Name=Cc11_g04510;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0005634,CC_EC_number:missing_EC_number,PRODUCT:High mobility group B protein 7,CC_functional_completeness:fragment,CC_gene:HMGB7,CC_gene:HMGB1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004803001~ High mobility group B protein 7~ HMGB7~ fragment;original_location=join(362535..362683%2C362808..362890%2C363437..363488%2C363601..363699%2C363781..363838%2C363942..363986%2C364083..364175%2C364294..364353);owner=coffea | |
| 59017 chr11 manual_curation exon 17733020 17733235 . + . Parent=GSCOCT00004803001 | |
| 59018 chr11 manual_curation exon 17733360 17733442 . + . Parent=GSCOCT00004803001 | |
| 59019 chr11 manual_curation exon 17733989 17734040 . + . Parent=GSCOCT00004803001 | |
| 59020 chr11 manual_curation exon 17734153 17734251 . + . Parent=GSCOCT00004803001 | |
| 59021 chr11 manual_curation exon 17734333 17734390 . + . Parent=GSCOCT00004803001 | |
| 59022 chr11 manual_curation exon 17734494 17734538 . + . Parent=GSCOCT00004803001 | |
| 59023 chr11 manual_curation exon 17734635 17734727 . + . Parent=GSCOCT00004803001 | |
| 59024 chr11 manual_curation exon 17734846 17735229 . + . Parent=GSCOCT00004803001 | |
| 59025 chr11 manual_curation CDS 17733087 17733235 . + 0 Parent=GSCOCT00004803001 | |
| 59026 chr11 manual_curation CDS 17733360 17733442 . + 2 Parent=GSCOCT00004803001 | |
| 59027 chr11 manual_curation CDS 17733989 17734040 . + 1 Parent=GSCOCT00004803001 | |
| 59028 chr11 manual_curation CDS 17734153 17734251 . + 2 Parent=GSCOCT00004803001 | |
| 59029 chr11 manual_curation CDS 17734333 17734390 . + 2 Parent=GSCOCT00004803001 | |
| 59030 chr11 manual_curation CDS 17734494 17734538 . + 0 Parent=GSCOCT00004803001 | |
| 59031 chr11 manual_curation CDS 17734635 17734727 . + 0 Parent=GSCOCT00004803001 | |
| 59032 chr11 manual_curation CDS 17734846 17734905 . + 0 Parent=GSCOCT00004803001 | |
| 59033 chr11 manual_curation gene 17735533 17737332 . - . ID=GSCOCG00004804001;Name=Cc11_g04520 | |
| 59034 chr11 manual_curation mRNA 17735533 17737332 . - . ID=GSCOCT00004804001;Parent=GSCOCG00004804001;Name=Cc11_g04520 | |
| 59035 chr11 manual_curation polypeptide 17735533 17737332 . - . ID=GSCOCP00004804001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SMART:SM00369,SwissProt:C0LGQ5,SwissProt:Q8VZG8,SwissProt:Q9LP24,TAIR:AT1G33590.1,TAIR:AT2G26380.1,TAIR:AT5G23400.1,TrEMBL:B9HG85,TrEMBL:B9RGI4,TrEMBL:F6HVY7;Derives_from=GSCOCT00004804001;Name=Cc11_g04520;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:3.1.3.16,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At4g08850,CC_functional_completeness:complete,CC_gene:At4g08850,CC_gene:GSO1,CC_gene:At1g35710;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004804001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At4g08850~ At4g08850~ complete;original_location=complement(364981..366780);owner=coffea | |
| 59036 chr11 manual_curation exon 17735533 17737332 . - . Parent=GSCOCT00004804001 | |
| 59037 chr11 manual_curation CDS 17735533 17737332 . - 0 Parent=GSCOCT00004804001 | |
| 59038 chr11 manual_curation gene 17777477 17781207 . + . ID=GSCOCG00004805001;Name=Cc11_g04530 | |
| 59039 chr11 manual_curation mRNA 17777477 17781207 . + . ID=GSCOCT00004805001;Parent=GSCOCG00004805001;Name=Cc11_g04530 | |
| 59040 chr11 manual_curation polypeptide 17777477 17780953 . + . ID=GSCOCP00004805001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q60CZ8,SwissProt:Q6L3Z7,SwissProt:Q6L438,TAIR:AT1G53350.1,TAIR:AT1G58390.1,TAIR:AT5G35450.1,TrEMBL:Q6L432,TrEMBL:Q96485,TrEMBL:Q9LLD0;Derives_from=GSCOCT00004805001;Name=Cc11_g04530;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative Disease resistance protein (CC-NBS-LRR class) family,CC_functional_completeness:modules,CC_gene:R1A-6,CC_gene:R1A-10,CC_gene:R1B-14;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004805001~ Putative Disease resistance protein (CC-NBS-LRR class) family~ R1A-6~ modules;original_location=406925..410401;owner=coffea | |
| 59041 chr11 manual_curation exon 17777477 17781207 . + . Parent=GSCOCT00004805001 | |
| 59042 chr11 manual_curation CDS 17777477 17780953 . + 0 Parent=GSCOCT00004805001 | |
| 59043 chr11 manual_curation gene 17840858 17841190 . + . ID=GSCOCG00004806001;Name=Cc11_g04540 | |
| 59044 chr11 manual_curation mRNA 17840858 17841190 . + . ID=GSCOCT00004806001;Parent=GSCOCG00004806001;Name=Cc11_g04540 | |
| 59045 chr11 manual_curation polypeptide 17840858 17841190 . + . ID=GSCOCP00004806001;Dbxref=TrEMBL:G8A0F0,TrEMBL:Q7F966,TrEMBL:Q7XA28;Derives_from=GSCOCT00004806001;Name=Cc11_g04540;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Zinc knuckle family protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004806001~ Putative Zinc knuckle family protein~ unknown_gene~ fragment;original_location=470306..470638;owner=coffea | |
| 59046 chr11 manual_curation exon 17840858 17841190 . + . Parent=GSCOCT00004806001 | |
| 59047 chr11 manual_curation CDS 17840858 17841190 . + 0 Parent=GSCOCT00004806001 | |
| 59048 chr11 manual_curation gene 17921455 17921742 . - . ID=GSCOCG00004809001;Name=Cc11_g04550 | |
| 59049 chr11 manual_curation mRNA 17921455 17921742 . - . ID=GSCOCT00004809001;Parent=GSCOCG00004809001;Name=Cc11_g04550 | |
| 59050 chr11 manual_curation polypeptide 17921455 17921742 . - . ID=GSCOCP00004809001;Dbxref=InterPro:IPR003851,PFAM:PF02701,PRODOM:PD007478,PROFILE:PS50884,SwissProt:O80928,SwissProt:Q9LSL6,SwissProt:Q9M2U1,TAIR:AT2G37590.1,TAIR:AT3G55370.3,TAIR:AT5G65590.1,TrEMBL:A5BPT6,TrEMBL:B9T2B0,TrEMBL:F6I721;Derives_from=GSCOCT00004809001;Name=Cc11_g04550;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0008270,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Dof zinc finger protein DOF5.7,CC_functional_completeness:fragment,CC_gene:DOF5.7,CC_gene:DOF2.4,CC_gene:DOF3.6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004809001~ Dof zinc finger protein DOF5.7~ DOF5.7~ fragment;original_location=complement(550903..551190);owner=coffea | |
| 59051 chr11 manual_curation exon 17921455 17921742 . - . Parent=GSCOCT00004809001 | |
| 59052 chr11 manual_curation CDS 17921455 17921742 . - 0 Parent=GSCOCT00004809001 | |
| 59053 chr11 manual_curation gene 17982767 17984032 . - . ID=GSCOCG00004812001;Name=Cc11_g04560 | |
| 59054 chr11 manual_curation mRNA 17982767 17984032 . - . ID=GSCOCT00004812001;Parent=GSCOCG00004812001;Name=Cc11_g04560 | |
| 59055 chr11 manual_curation polypeptide 17983304 17984032 . - . ID=GSCOCP00004812001;Derives_from=GSCOCT00004812001;Name=Cc11_g04560;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004812001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(613384..613480%2C612752..612879));owner=coffea | |
| 59056 chr11 manual_curation exon 17982767 17983431 . - . Parent=GSCOCT00004812001 | |
| 59057 chr11 manual_curation exon 17983936 17984032 . - . Parent=GSCOCT00004812001 | |
| 59058 chr11 manual_curation CDS 17983304 17983431 . - 1 Parent=GSCOCT00004812001 | |
| 59059 chr11 manual_curation CDS 17983936 17984032 . - 0 Parent=GSCOCT00004812001 | |
| 59060 chr11 manual_curation gene 17993101 17993779 . + . ID=GSCOCG00004813001;Name=Cc11_g04570 | |
| 59061 chr11 manual_curation mRNA 17993101 17993779 . + . ID=GSCOCT00004813001;Parent=GSCOCG00004813001;Name=Cc11_g04570 | |
| 59062 chr11 manual_curation polypeptide 17993101 17993779 . + . ID=GSCOCP00004813001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,SUPERFAMILY:SSF48264,SwissProt:O65790,SwissProt:P93147,SwissProt:Q9FG65,TAIR:AT4G37340.1,TAIR:AT4G37360.1,TAIR:AT5G36220.1,TrEMBL:B9R747,TrEMBL:D7MI05,TrEMBL:Q33DX9;Derives_from=GSCOCT00004813001;Name=Cc11_g04570;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.89,PRODUCT:Cytochrome P450 81D1,CC_functional_completeness:fragment,CC_gene:CYP81D1,CC_gene:CYP81E1,CC_gene:CYP81F1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004813001~ Cytochrome P450 81D1~ CYP81D1~ fragment;original_location=join(622549..622612%2C622680..623227);owner=coffea | |
| 59063 chr11 manual_curation exon 17993101 17993164 . + . Parent=GSCOCT00004813001 | |
| 59064 chr11 manual_curation exon 17993232 17993779 . + . Parent=GSCOCT00004813001 | |
| 59065 chr11 manual_curation CDS 17993101 17993164 . + 0 Parent=GSCOCT00004813001 | |
| 59066 chr11 manual_curation CDS 17993232 17993779 . + 1 Parent=GSCOCT00004813001 | |
| 59067 chr11 manual_curation gene 18017881 18018610 . - . ID=GSCOCG00004815001;Name=Cc11_g04580 | |
| 59068 chr11 manual_curation mRNA 18017881 18018610 . - . ID=GSCOCT00004815001;Parent=GSCOCG00004815001;Name=Cc11_g04580 | |
| 59069 chr11 manual_curation polypeptide 18017881 18018610 . - . ID=GSCOCP00004815001;Dbxref=TAIR:AT3G02920.2,TrEMBL:D7L0A8,TrEMBL:D7SQB0,TrEMBL:Q4LAW1;Derives_from=GSCOCT00004815001;Name=Cc11_g04580;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Replication protein A%2C subunit RPA32,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004815001~ Putative Replication protein A%2C subunit RPA32~ unknown_gene~ fragment;original_location=complement(join(648036..648058%2C647728..647833%2C647494..647583%2C647329..647412));owner=coffea | |
| 59070 chr11 manual_curation exon 18017881 18017964 . - . Parent=GSCOCT00004815001 | |
| 59071 chr11 manual_curation exon 18018046 18018135 . - . Parent=GSCOCT00004815001 | |
| 59072 chr11 manual_curation exon 18018280 18018385 . - . Parent=GSCOCT00004815001 | |
| 59073 chr11 manual_curation exon 18018588 18018610 . - . Parent=GSCOCT00004815001 | |
| 59074 chr11 manual_curation CDS 18017881 18017964 . - 0 Parent=GSCOCT00004815001 | |
| 59075 chr11 manual_curation CDS 18018046 18018135 . - 0 Parent=GSCOCT00004815001 | |
| 59076 chr11 manual_curation CDS 18018280 18018385 . - 2 Parent=GSCOCT00004815001 | |
| 59077 chr11 manual_curation CDS 18018588 18018610 . - 0 Parent=GSCOCT00004815001 | |
| 59078 chr11 manual_curation gene 18018871 18018945 . - . ID=GSCOCG00004816001;Name=Cc11_g04590 | |
| 59079 chr11 manual_curation mRNA 18018871 18018945 . - . ID=GSCOCT00004816001;Parent=GSCOCG00004816001;Name=Cc11_g04590 | |
| 59080 chr11 manual_curation polypeptide 18018871 18018945 . - . ID=GSCOCP00004816001;Derives_from=GSCOCT00004816001;Name=Cc11_g04590;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004816001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(648319..648393);owner=coffea | |
| 59081 chr11 manual_curation exon 18018871 18018945 . - . Parent=GSCOCT00004816001 | |
| 59082 chr11 manual_curation CDS 18018871 18018945 . - 0 Parent=GSCOCT00004816001 | |
| 59083 chr11 manual_curation gene 18094446 18095843 . + . ID=GSCOCG00004818001;Name=Cc11_g04600 | |
| 59084 chr11 manual_curation mRNA 18094446 18095843 . + . ID=GSCOCT00004818001;Parent=GSCOCG00004818001;Name=Cc11_g04600 | |
| 59085 chr11 manual_curation polypeptide 18094446 18095726 . + . ID=GSCOCP00004818001;Dbxref=TAIR:AT3G19990.1,TrEMBL:B9HG84,TrEMBL:B9RGI5,TrEMBL:C6TLE4;Derives_from=GSCOCT00004818001;Name=Cc11_g04600;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B INVOLVED IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004818001~ unknown protein%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast stroma%2C chloroplast%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B Has 118 Blast hits to 118 proteins in 41 species: Archae - 0%3B Bacteria - 42%3B Metazoa - 0%3B Fungi - 0%3B Plants - 56%3B Viruses - 0%3B Other Eukaryotes - 20 (source: NCBI BLink).~ unknown_gene~ complete;original_location=723894..725174;owner=coffea | |
| 59086 chr11 manual_curation exon 18094446 18095843 . + . Parent=GSCOCT00004818001 | |
| 59087 chr11 manual_curation CDS 18094446 18095726 . + 0 Parent=GSCOCT00004818001 | |
| 59088 chr11 manual_curation gene 18136831 18138107 . + . ID=GSCOCG00004819001;Name=Cc11_g04610 | |
| 59089 chr11 manual_curation mRNA 18136831 18138107 . + . ID=GSCOCT00004819001;Parent=GSCOCG00004819001;Name=Cc11_g04610 | |
| 59090 chr11 manual_curation polypeptide 18136864 18137841 . + . ID=GSCOCP00004819001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR002198,InterPro:IPR002347,InterPro:IPR016040,PANTHER:PTHR19410,PFAM:PF00106,PRINTS:PR00080,PRINTS:PR00081,SwissProt:P50160,SwissProt:Q7FAE1,SwissProt:Q9C826,TAIR:AT1G52340.1,TAIR:AT2G47140.1,TAIR:AT3G51680.1,TrEMBL:F6HKP7,TrEMBL:F6HKP8,TrEMBL:F6HKQ0;Derives_from=GSCOCT00004819001;Name=Cc11_g04610;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,GO:0016491,GO:0055114,CC_EC_number:1.1.1.53,PRODUCT:Momilactone A synthase,CC_functional_completeness:complete,CC_gene:Os04g0179200,CC_gene:ABA2,CC_gene:TS2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004819001~ Momilactone A synthase~ Os04g0179200~ complete;original_location=join(766312..766355%2C766452..767289);owner=coffea | |
| 59091 chr11 manual_curation exon 18136831 18136907 . + . Parent=GSCOCT00004819001 | |
| 59092 chr11 manual_curation exon 18137004 18138107 . + . Parent=GSCOCT00004819001 | |
| 59093 chr11 manual_curation CDS 18136864 18136907 . + 0 Parent=GSCOCT00004819001 | |
| 59094 chr11 manual_curation CDS 18137004 18137841 . + 2 Parent=GSCOCT00004819001 | |
| 59095 chr11 manual_curation gene 18158776 18159733 . + . ID=GSCOCG00004820001;Name=Cc11_g04620 | |
| 59096 chr11 manual_curation mRNA 18158776 18159733 . + . ID=GSCOCT00004820001;Parent=GSCOCG00004820001;Name=Cc11_g04620 | |
| 59097 chr11 manual_curation polypeptide 18158776 18159733 . + . ID=GSCOCP00004820001;Dbxref=TAIR:AT1G55360.1,TAIR:AT3G13510.1,TAIR:AT5G56530.1,TrEMBL:B9GLD1,TrEMBL:B9GY58,TrEMBL:D7SSN3;Derives_from=GSCOCT00004820001;Name=Cc11_g04620;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of Unknown Function (DUF239),CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004820001~ Putative Protein of Unknown Function (DUF239)~ unknown_gene~ fragment;original_location=join(788224..788253%2C788344..788487%2C788730..788816%2C788915..789181);owner=coffea | |
| 59098 chr11 manual_curation exon 18158776 18158805 . + . Parent=GSCOCT00004820001 | |
| 59099 chr11 manual_curation exon 18158896 18159039 . + . Parent=GSCOCT00004820001 | |
| 59100 chr11 manual_curation exon 18159282 18159368 . + . Parent=GSCOCT00004820001 | |
| 59101 chr11 manual_curation exon 18159467 18159733 . + . Parent=GSCOCT00004820001 | |
| 59102 chr11 manual_curation CDS 18158776 18158805 . + 0 Parent=GSCOCT00004820001 | |
| 59103 chr11 manual_curation CDS 18158896 18159039 . + 0 Parent=GSCOCT00004820001 | |
| 59104 chr11 manual_curation CDS 18159282 18159368 . + 0 Parent=GSCOCT00004820001 | |
| 59105 chr11 manual_curation CDS 18159467 18159733 . + 0 Parent=GSCOCT00004820001 | |
| 59106 chr11 manual_curation gene 18161283 18162563 . - . ID=GSCOCG00004822001;Name=Cc11_g04630 | |
| 59107 chr11 manual_curation mRNA 18161283 18162563 . - . ID=GSCOCT00004822001;Parent=GSCOCG00004822001;Name=Cc11_g04630 | |
| 59108 chr11 manual_curation polypeptide 18161283 18162563 . - . ID=GSCOCP00004822001;Dbxref=TAIR:AT3G19990.1,TrEMBL:B9HG84,TrEMBL:B9RGI5,TrEMBL:C6TLE4;Derives_from=GSCOCT00004822001;Name=Cc11_g04630;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B INVOLVED IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004822001~ unknown protein%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast stroma%2C chloroplast%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B Has 118 Blast hits to 118 proteins in 41 species: Archae - 0%3B Bacteria - 42%3B Metazoa - 0%3B Fungi - 0%3B Plants - 56%3B Viruses - 0%3B Other Eukaryotes - 20 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(790731..792011);owner=coffea | |
| 59109 chr11 manual_curation exon 18161283 18162563 . - . Parent=GSCOCT00004822001 | |
| 59110 chr11 manual_curation CDS 18161283 18162563 . - 0 Parent=GSCOCT00004822001 | |
| 59111 chr11 manual_curation gene 18194787 18196896 . + . ID=GSCOCG00004824001;Name=Cc11_g04640 | |
| 59112 chr11 manual_curation mRNA 18194787 18196896 . + . ID=GSCOCT00004824001;Parent=GSCOCG00004824001;Name=Cc11_g04640 | |
| 59113 chr11 manual_curation polypeptide 18195057 18196775 . + . ID=GSCOCP00004824001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:O04504,SwissProt:Q3EDF8,SwissProt:Q9SR00,TAIR:AT1G09820.1,TAIR:AT1G09900.1,TAIR:AT3G04760.1,TIGRFAMs:TIGR00756,TrEMBL:B9IQC0,TrEMBL:B9SHR7,TrEMBL:G7ZYA7;Derives_from=GSCOCT00004824001;Name=Cc11_g04640;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Pentatricopeptide repeat (PPR-like) superfamily protein,CC_functional_completeness:complete,CC_gene:At1g09820,CC_gene:At3g04760,CC_gene:At1g09900;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004824001~ Putative Pentatricopeptide repeat (PPR-like) superfamily protein~ At1g09820~ complete;original_location=824505..826223;owner=coffea | |
| 59114 chr11 manual_curation exon 18194787 18196896 . + . Parent=GSCOCT00004824001 | |
| 59115 chr11 manual_curation CDS 18195057 18196775 . + 0 Parent=GSCOCT00004824001 | |
| 59116 chr11 manual_curation gene 18220856 18222076 . - . ID=GSCOCG00004828001;Name=Cc11_g04650 | |
| 59117 chr11 manual_curation mRNA 18220856 18222076 . - . ID=GSCOCT00004828001;Parent=GSCOCG00004828001;Name=Cc11_g04650 | |
| 59118 chr11 manual_curation polypeptide 18220856 18221891 . - . ID=GSCOCP00004828001;Dbxref=InterPro:IPR000582,PFAM:PF00887,SUPERFAMILY:SSF47027;Derives_from=GSCOCT00004828001;Name=Cc11_g04650;Ontology_term=CC_evidence_code:ISS,GO:0000062,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004828001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(851106..851339%2C850899..850975%2C850473..850536%2C850304..850387));owner=coffea | |
| 59119 chr11 manual_curation exon 18220856 18220939 . - . Parent=GSCOCT00004828001 | |
| 59120 chr11 manual_curation exon 18221025 18221088 . - . Parent=GSCOCT00004828001 | |
| 59121 chr11 manual_curation exon 18221451 18221527 . - . Parent=GSCOCT00004828001 | |
| 59122 chr11 manual_curation exon 18221658 18222076 . - . Parent=GSCOCT00004828001 | |
| 59123 chr11 manual_curation CDS 18220856 18220939 . - 0 Parent=GSCOCT00004828001 | |
| 59124 chr11 manual_curation CDS 18221025 18221088 . - 2 Parent=GSCOCT00004828001 | |
| 59125 chr11 manual_curation CDS 18221451 18221527 . - 0 Parent=GSCOCT00004828001 | |
| 59126 chr11 manual_curation CDS 18221658 18221891 . - 0 Parent=GSCOCT00004828001 | |
| 59127 chr11 manual_curation gene 18300297 18302933 . + . ID=GSCOCG00004830001;Name=Cc11_g04660 | |
| 59128 chr11 manual_curation mRNA 18300297 18302933 . + . ID=GSCOCT00004830001;Parent=GSCOCG00004830001;Name=Cc11_g04660 | |
| 59129 chr11 manual_curation polypeptide 18300297 18302933 . + . ID=GSCOCP00004830001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q0WN60,SwissProt:Q7Y211,SwissProt:Q9LIE7,TAIR:AT1G18485.1,TAIR:AT3G22150.1,TAIR:AT3G57430.1,TIGRFAMs:TIGR00756,TrEMBL:A5B6W9,TrEMBL:D7L1K9,TrEMBL:G7KFD3;Derives_from=GSCOCT00004830001;Name=Cc11_g04660;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At3g22150%2C chloroplastic,CC_functional_completeness:complete,CC_gene:PCMP-E95,CC_gene:PCMP-H8,CC_gene:PCMP-H81;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004830001~ Pentatricopeptide repeat-containing protein At3g22150%2C chloroplastic~ PCMP-E95~ complete;original_location=929745..932381;owner=coffea | |
| 59130 chr11 manual_curation exon 18300297 18302933 . + . Parent=GSCOCT00004830001 | |
| 59131 chr11 manual_curation CDS 18300297 18302933 . + 0 Parent=GSCOCT00004830001 | |
| 59132 chr11 manual_curation gene 18302993 18307503 . + . ID=GSCOCG00004831001;Name=Cc11_g04670 | |
| 59133 chr11 manual_curation mRNA 18302993 18307503 . + . ID=GSCOCT00004831001;Parent=GSCOCG00004831001;Name=Cc11_g04670 | |
| 59134 chr11 manual_curation polypeptide 18302993 18304261 . + . ID=GSCOCP00004831001;Derives_from=GSCOCT00004831001;Name=Cc11_g04670;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004831001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(932441..932504%2C933335..933392%2C933628..933709);owner=coffea | |
| 59135 chr11 manual_curation exon 18304572 18304650 . + . Parent=GSCOCT00004831001 | |
| 59136 chr11 manual_curation exon 18307337 18307503 . + . Parent=GSCOCT00004831001 | |
| 59137 chr11 manual_curation exon 18302993 18303056 . + . Parent=GSCOCT00004831001 | |
| 59138 chr11 manual_curation exon 18303887 18303944 . + . Parent=GSCOCT00004831001 | |
| 59139 chr11 manual_curation exon 18304180 18304269 . + . Parent=GSCOCT00004831001 | |
| 59140 chr11 manual_curation CDS 18302993 18303056 . + 0 Parent=GSCOCT00004831001 | |
| 59141 chr11 manual_curation CDS 18303887 18303944 . + 1 Parent=GSCOCT00004831001 | |
| 59142 chr11 manual_curation CDS 18304180 18304261 . + 2 Parent=GSCOCT00004831001 | |
| 59143 chr11 manual_curation gene 18320335 18321766 . + . ID=GSCOCG00004833001;Name=Cc11_g04680 | |
| 59144 chr11 manual_curation mRNA 18320335 18321766 . + . ID=GSCOCT00004833001;Parent=GSCOCG00004833001;Name=Cc11_g04680 | |
| 59145 chr11 manual_curation polypeptide 18320335 18321396 . + . ID=GSCOCP00004833001;Dbxref=InterPro:IPR000863,PFAM:PF00685,SwissProt:Q8L5A7,SwissProt:Q9C9D0,SwissProt:Q9FZ80,TAIR:AT1G18590.1,TAIR:AT1G74100.1,TAIR:AT5G07010.1,TrEMBL:B9NHR4,TrEMBL:B9P614,TrEMBL:F6GSG4;Derives_from=GSCOCT00004833001;Name=Cc11_g04680;Ontology_term=CC_evidence_code:ISS,GO:0008146,CC_EC_number:2.8.2.4,PRODUCT:Putative Cytosolic sulfotransferase 17,CC_functional_completeness:complete,CC_gene:SOT17,CC_gene:SOT16,CC_gene:SOT15;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00004833001~ Putative Cytosolic sulfotransferase 17~ SOT17~ complete;original_location=949783..950844;owner=coffea | |
| 59146 chr11 manual_curation exon 18320335 18321766 . + . Parent=GSCOCT00004833001 | |
| 59147 chr11 manual_curation CDS 18320335 18321396 . + 0 Parent=GSCOCT00004833001 | |
| 59148 chr11 manual_curation gene 18382131 18385507 . - . ID=GSCOCG00042895001;Name=Cc11_g04690 | |
| 59149 chr11 manual_curation mRNA 18382131 18385507 . - . ID=GSCOCT00042895001;Parent=GSCOCG00042895001;Name=Cc11_g04690 | |
| 59150 chr11 manual_curation polypeptide 18382303 18385333 . - . ID=GSCOCP00042895001;Dbxref=InterPro:IPR006918,InterPro:IPR017391,PFAM:PF04833,PIR:PIRSF038122,PRODOM:PD140986,SwissProt:Q6Z4G8,SwissProt:Q94KT8,SwissProt:Q9SRT7,TAIR:AT3G02210.1,TAIR:AT3G29810.1,TAIR:AT5G60920.1,TrEMBL:A5BRW4,TrEMBL:D7SIL9,TrEMBL:D7SMP8;Derives_from=GSCOCT00042895001;Name=Cc11_g04690;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:COBRA-like protein 1,CC_functional_completeness:complete,CC_gene:COBL1,CC_gene:COB,CC_gene:BC1L6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00042895001~ COBRA-like protein 1~ COBL1~ complete;original_location=complement(join(54458..54557%2C53898..53977%2C52922..53378%2C52294..52459%2C51918..52198%2C51527..51819));owner=coffea | |
| 59151 chr11 manual_curation exon 18382131 18382595 . - . Parent=GSCOCT00042895001 | |
| 59152 chr11 manual_curation exon 18382694 18382974 . - . Parent=GSCOCT00042895001 | |
| 59153 chr11 manual_curation exon 18383070 18383235 . - . Parent=GSCOCT00042895001 | |
| 59154 chr11 manual_curation exon 18383698 18384154 . - . Parent=GSCOCT00042895001 | |
| 59155 chr11 manual_curation exon 18384674 18384753 . - . Parent=GSCOCT00042895001 | |
| 59156 chr11 manual_curation exon 18385234 18385507 . - . Parent=GSCOCT00042895001 | |
| 59157 chr11 manual_curation CDS 18382303 18382595 . - 1 Parent=GSCOCT00042895001 | |
| 59158 chr11 manual_curation CDS 18382694 18382974 . - 2 Parent=GSCOCT00042895001 | |
| 59159 chr11 manual_curation CDS 18383070 18383235 . - 1 Parent=GSCOCT00042895001 | |
| 59160 chr11 manual_curation CDS 18383698 18384154 . - 0 Parent=GSCOCT00042895001 | |
| 59161 chr11 manual_curation CDS 18384674 18384753 . - 1 Parent=GSCOCT00042895001 | |
| 59162 chr11 manual_curation CDS 18385234 18385333 . - 0 Parent=GSCOCT00042895001 | |
| 59163 chr11 manual_curation gene 18419123 18426163 . + . ID=GSCOCG00042896001;Name=Cc11_g04700 | |
| 59164 chr11 manual_curation mRNA 18419123 18426163 . + . ID=GSCOCT00042896001;Parent=GSCOCG00042896001;Name=Cc11_g04700 | |
| 59165 chr11 manual_curation polypeptide 18419343 18425842 . + . ID=GSCOCP00042896001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019775,InterPro:IPR019781,InterPro:IPR019782,InterPro:IPR020472,PFAM:PF00400,PRINTS:PR00320,PROFILE:PS50082,PROFILE:PS50294,PROSITE:PS00678,SMART:SM00320,SUPERFAMILY:SSF50978,SwissProt:Q05048,SwissProt:Q5BJQ6,SwissProt:Q99LC2,TAIR:AT3G49660.1,TAIR:AT4G02730.1,TAIR:AT5G60940.1,TrEMBL:B9RLL1,TrEMBL:D7SIL8,TrEMBL:I1KD31;Derives_from=GSCOCT00042896001;Name=Cc11_g04700;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.7.11.7,PRODUCT:Putative Cleavage stimulation factor subunit 1,CC_functional_completeness:complete,CC_gene:CSTF1,CC_gene:Cstf1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00042896001~ Putative Cleavage stimulation factor subunit 1~ CSTF1~ complete;original_location=join(88567..88680%2C89689..89772%2C89901..90054%2C90364..90382%2C90599..90671%2C90777..90860%2C90948..91034%2C91773..91843%2C91988..92039%2C92144..92201%2C93043..93143%2C93283..93437%2C93844..93952%2C94773..94829%2C94911..95066);owner=coffea | |
| 59166 chr11 manual_curation exon 18419123 18419216 . + . Parent=GSCOCT00042896001 | |
| 59167 chr11 manual_curation exon 18419301 18419456 . + . Parent=GSCOCT00042896001 | |
| 59168 chr11 manual_curation exon 18420465 18420548 . + . Parent=GSCOCT00042896001 | |
| 59169 chr11 manual_curation exon 18420677 18420830 . + . Parent=GSCOCT00042896001 | |
| 59170 chr11 manual_curation exon 18421140 18421158 . + . Parent=GSCOCT00042896001 | |
| 59171 chr11 manual_curation exon 18421375 18421447 . + . Parent=GSCOCT00042896001 | |
| 59172 chr11 manual_curation exon 18421553 18421636 . + . Parent=GSCOCT00042896001 | |
| 59173 chr11 manual_curation exon 18421724 18421810 . + . Parent=GSCOCT00042896001 | |
| 59174 chr11 manual_curation exon 18422549 18422619 . + . Parent=GSCOCT00042896001 | |
| 59175 chr11 manual_curation exon 18422764 18422815 . + . Parent=GSCOCT00042896001 | |
| 59176 chr11 manual_curation exon 18422920 18422977 . + . Parent=GSCOCT00042896001 | |
| 59177 chr11 manual_curation exon 18423819 18423919 . + . Parent=GSCOCT00042896001 | |
| 59178 chr11 manual_curation exon 18424059 18424213 . + . Parent=GSCOCT00042896001 | |
| 59179 chr11 manual_curation exon 18424620 18424728 . + . Parent=GSCOCT00042896001 | |
| 59180 chr11 manual_curation exon 18425549 18425605 . + . Parent=GSCOCT00042896001 | |
| 59181 chr11 manual_curation exon 18425687 18426163 . + . Parent=GSCOCT00042896001 | |
| 59182 chr11 manual_curation CDS 18419343 18419456 . + 0 Parent=GSCOCT00042896001 | |
| 59183 chr11 manual_curation CDS 18420465 18420548 . + 0 Parent=GSCOCT00042896001 | |
| 59184 chr11 manual_curation CDS 18420677 18420830 . + 0 Parent=GSCOCT00042896001 | |
| 59185 chr11 manual_curation CDS 18421140 18421158 . + 1 Parent=GSCOCT00042896001 | |
| 59186 chr11 manual_curation CDS 18421375 18421447 . + 2 Parent=GSCOCT00042896001 | |
| 59187 chr11 manual_curation CDS 18421553 18421636 . + 0 Parent=GSCOCT00042896001 | |
| 59188 chr11 manual_curation CDS 18421724 18421810 . + 0 Parent=GSCOCT00042896001 | |
| 59189 chr11 manual_curation CDS 18422549 18422619 . + 0 Parent=GSCOCT00042896001 | |
| 59190 chr11 manual_curation CDS 18422764 18422815 . + 2 Parent=GSCOCT00042896001 | |
| 59191 chr11 manual_curation CDS 18422920 18422977 . + 0 Parent=GSCOCT00042896001 | |
| 59192 chr11 manual_curation CDS 18423819 18423919 . + 1 Parent=GSCOCT00042896001 | |
| 59193 chr11 manual_curation CDS 18424059 18424213 . + 0 Parent=GSCOCT00042896001 | |
| 59194 chr11 manual_curation CDS 18424620 18424728 . + 2 Parent=GSCOCT00042896001 | |
| 59195 chr11 manual_curation CDS 18425549 18425605 . + 0 Parent=GSCOCT00042896001 | |
| 59196 chr11 manual_curation CDS 18425687 18425842 . + 0 Parent=GSCOCT00042896001 | |
| 59197 chr11 manual_curation gene 18427702 18429342 . - . ID=GSCOCG00042898001;Name=Cc11_g04710 | |
| 59198 chr11 manual_curation mRNA 18427702 18429342 . - . ID=GSCOCT00042898001;Parent=GSCOCG00042898001;Name=Cc11_g04710 | |
| 59199 chr11 manual_curation polypeptide 18427702 18429342 . - . ID=GSCOCP00042898001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q0WP85,SwissProt:Q9FLJ6,SwissProt:Q9FME4,TAIR:AT1G20300.1,TAIR:AT5G60960.1,TAIR:AT5G61370.1,TIGRFAMs:TIGR00756,TrEMBL:B9GUQ1,TrEMBL:D7SIL7,TrEMBL:I1LBM1;Derives_from=GSCOCT00042898001;Name=Cc11_g04710;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At5g60960%2C mitochondrial,CC_functional_completeness:complete,CC_gene:At5g60960,CC_gene:At5g61370,CC_gene:At2g13420;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00042898001~ Pentatricopeptide repeat-containing protein At5g60960%2C mitochondrial~ At5g60960~ complete;original_location=complement(96926..98566);owner=coffea | |
| 59200 chr11 manual_curation exon 18427702 18429342 . - . Parent=GSCOCT00042898001 | |
| 59201 chr11 manual_curation CDS 18427702 18429342 . - 0 Parent=GSCOCT00042898001 | |
| 59202 chr11 manual_curation gene 18429639 18435154 . + . ID=GSCOCG00042899001;Name=Cc11_g04720 | |
| 59203 chr11 manual_curation mRNA 18429639 18435154 . + . ID=GSCOCT00042899001;Parent=GSCOCG00042899001;Name=Cc11_g04720 | |
| 59204 chr11 manual_curation polypeptide 18431168 18434802 . + . ID=GSCOCP00042899001;Dbxref=GENE3D:G3DSA:3.40.1000.10,InterPro:IPR002683,InterPro:IPR016123,InterPro:IPR016124,PFAM:PF01789,SUPERFAMILY:SSF55724,SwissProt:O80634,SwissProt:P82538,TAIR:AT2G39470.1,TAIR:AT3G05410.2,TAIR:AT3G55330.1,TrEMBL:B9HTN3,TrEMBL:B9T155,TrEMBL:D7TLZ4;Derives_from=GSCOCT00042899001;Name=Cc11_g04720;Ontology_term=CC_evidence_code:ISS,GO:0005509,GO:0009654,GO:0015979,GO:0019898,CC_EC_number:missing_EC_number,PRODUCT:PsbP-like protein 1%2C chloroplastic,CC_functional_completeness:complete,CC_gene:PPL1,CC_gene:PPL2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00042899001~ PsbP-like protein 1%2C chloroplastic~ PPL1~ complete;original_location=join(100392..100454%2C100555..100648%2C100983..101066%2C101299..101381%2C101532..101654%2C101909..101980%2C102956..103052%2C103923..104026);owner=coffea | |
| 59205 chr11 manual_curation exon 18429639 18429744 . + . Parent=GSCOCT00042899001 | |
| 59206 chr11 manual_curation exon 18431148 18431230 . + . Parent=GSCOCT00042899001 | |
| 59207 chr11 manual_curation exon 18431331 18431424 . + . Parent=GSCOCT00042899001 | |
| 59208 chr11 manual_curation exon 18431759 18431842 . + . Parent=GSCOCT00042899001 | |
| 59209 chr11 manual_curation exon 18432075 18432157 . + . Parent=GSCOCT00042899001 | |
| 59210 chr11 manual_curation exon 18432308 18432430 . + . Parent=GSCOCT00042899001 | |
| 59211 chr11 manual_curation exon 18432685 18432756 . + . Parent=GSCOCT00042899001 | |
| 59212 chr11 manual_curation exon 18433732 18433828 . + . Parent=GSCOCT00042899001 | |
| 59213 chr11 manual_curation exon 18434699 18435154 . + . Parent=GSCOCT00042899001 | |
| 59214 chr11 manual_curation CDS 18431168 18431230 . + 0 Parent=GSCOCT00042899001 | |
| 59215 chr11 manual_curation CDS 18431331 18431424 . + 0 Parent=GSCOCT00042899001 | |
| 59216 chr11 manual_curation CDS 18431759 18431842 . + 1 Parent=GSCOCT00042899001 | |
| 59217 chr11 manual_curation CDS 18432075 18432157 . + 1 Parent=GSCOCT00042899001 | |
| 59218 chr11 manual_curation CDS 18432308 18432430 . + 0 Parent=GSCOCT00042899001 | |
| 59219 chr11 manual_curation CDS 18432685 18432756 . + 0 Parent=GSCOCT00042899001 | |
| 59220 chr11 manual_curation CDS 18433732 18433828 . + 0 Parent=GSCOCT00042899001 | |
| 59221 chr11 manual_curation CDS 18434699 18434802 . + 1 Parent=GSCOCT00042899001 | |
| 59222 chr11 manual_curation gene 18442062 18444834 . - . ID=GSCOCG00042900001;Name=Cc11_g04730 | |
| 59223 chr11 manual_curation mRNA 18442062 18444834 . - . ID=GSCOCT00042900001;Parent=GSCOCG00042900001;Name=Cc11_g04730 | |
| 59224 chr11 manual_curation polypeptide 18442449 18444706 . - . ID=GSCOCP00042900001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:O48927,SwissProt:O65012,SwissProt:Q7Y1V5,TAIR:AT1G13710.1,TAIR:AT1G74110.1,TAIR:AT2G46660.1,TrEMBL:A5AW45,TrEMBL:F6GTD9,TrEMBL:I1MT86;Derives_from=GSCOCT00042900001;Name=Cc11_g04730;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.21,PRODUCT:Cytochrome P450 78A3,CC_functional_completeness:complete,CC_gene:CYP78A3,CC_gene:CYP78A4,CC_gene:CYP78A11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00042900001~ Cytochrome P450 78A3~ CYP78A3~ complete;original_location=complement(join(112908..113930%2C111673..112272));owner=coffea | |
| 59225 chr11 manual_curation exon 18442062 18443048 . - . Parent=GSCOCT00042900001 | |
| 59226 chr11 manual_curation exon 18443684 18444834 . - . Parent=GSCOCT00042900001 | |
| 59227 chr11 manual_curation CDS 18442449 18443048 . - 0 Parent=GSCOCT00042900001 | |
| 59228 chr11 manual_curation CDS 18443684 18444706 . - 0 Parent=GSCOCT00042900001 | |
| 59229 chr11 manual_curation gene 18503541 18504279 . + . ID=GSCOCG00042902001;Name=Cc11_g04740 | |
| 59230 chr11 manual_curation mRNA 18503541 18504279 . + . ID=GSCOCT00042902001;Parent=GSCOCG00042902001;Name=Cc11_g04740 | |
| 59231 chr11 manual_curation polypeptide 18503574 18504137 . + . ID=GSCOCP00042902001;Derives_from=GSCOCT00042902001;Name=Cc11_g04740;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00042902001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=172798..173361;owner=coffea | |
| 59232 chr11 manual_curation exon 18503541 18504279 . + . Parent=GSCOCT00042902001 | |
| 59233 chr11 manual_curation CDS 18503574 18504137 . + 0 Parent=GSCOCT00042902001 | |
| 59234 chr11 manual_curation gene 18564700 18565273 . - . ID=GSCOCG00042904001;Name=Cc11_g04750 | |
| 59235 chr11 manual_curation mRNA 18564700 18565273 . - . ID=GSCOCT00042904001;Parent=GSCOCG00042904001;Name=Cc11_g04750 | |
| 59236 chr11 manual_curation polypeptide 18564700 18565026 . - . ID=GSCOCP00042904001;Dbxref=InterPro:IPR001209,InterPro:IPR018271,PANTHER:PTHR19836,PFAM:PF00253,PROSITE:PS00527,SwissProt:P05716,SwissProt:P14875,SwissProt:P49387,TAIR:AT2G34520.1,TrEMBL:A9PCE7,TrEMBL:B9I7P8,TrEMBL:B9T2M2;Derives_from=GSCOCT00042904001;Name=Cc11_g04750;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:Ribosomal protein S14%2C mitochondrial,CC_functional_completeness:complete,CC_gene:RPS14;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00042904001~ Ribosomal protein S14%2C mitochondrial~ RPS14~ complete;original_location=complement(233924..234250);owner=coffea | |
| 59237 chr11 manual_curation exon 18564700 18565273 . - . Parent=GSCOCT00042904001 | |
| 59238 chr11 manual_curation CDS 18564700 18565026 . - 0 Parent=GSCOCT00042904001 | |
| 59239 chr11 manual_curation gene 18626575 18630215 . + . ID=GSCOCG00042907001;Name=Cc11_g04760 | |
| 59240 chr11 manual_curation mRNA 18626575 18630215 . + . ID=GSCOCT00042907001;Parent=GSCOCG00042907001;Name=Cc11_g04760 | |
| 59241 chr11 manual_curation polypeptide 18626738 18629902 . + . ID=GSCOCP00042907001;Dbxref=InterPro:IPR006076,PFAM:PF01266,SwissProt:Q10058,TAIR:AT5G67290.1,TrEMBL:A5BCP3,TrEMBL:B9H462,TrEMBL:F6HSY8;Derives_from=GSCOCT00042907001;Name=Cc11_g04760;Ontology_term=CC_evidence_code:ISS,GO:0016491,CC_EC_number:missing_EC_number,PRODUCT:Putative oxidoreductase C1F5.03c,CC_functional_completeness:complete,CC_gene:SPAC1F5.03c;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00042907001~ Putative oxidoreductase C1F5.03c~ SPAC1F5.03c~ complete;original_location=join(295962..296031%2C297604..297672%2C297988..298985%2C299052..299126);owner=coffea | |
| 59242 chr11 manual_curation exon 18626575 18626807 . + . Parent=GSCOCT00042907001 | |
| 59243 chr11 manual_curation exon 18628380 18628448 . + . Parent=GSCOCT00042907001 | |
| 59244 chr11 manual_curation exon 18628764 18629761 . + . Parent=GSCOCT00042907001 | |
| 59245 chr11 manual_curation exon 18629828 18630215 . + . Parent=GSCOCT00042907001 | |
| 59246 chr11 manual_curation CDS 18626738 18626807 . + 0 Parent=GSCOCT00042907001 | |
| 59247 chr11 manual_curation CDS 18628380 18628448 . + 1 Parent=GSCOCT00042907001 | |
| 59248 chr11 manual_curation CDS 18628764 18629761 . + 1 Parent=GSCOCT00042907001 | |
| 59249 chr11 manual_curation CDS 18629828 18629902 . + 0 Parent=GSCOCT00042907001 | |
| 59250 chr11 manual_curation gene 18708981 18709066 . + . ID=GSCOCG00042908001;Name=Cc11_g04770 | |
| 59251 chr11 manual_curation mRNA 18708981 18709066 . + . ID=GSCOCT00042908001;Parent=GSCOCG00042908001;Name=Cc11_g04770 | |
| 59252 chr11 manual_curation polypeptide 18708998 18709066 . + . ID=GSCOCP00042908001;Derives_from=GSCOCT00042908001;Name=Cc11_g04770;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00042908001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=378222..378290;owner=coffea | |
| 59253 chr11 manual_curation exon 18708981 18709066 . + . Parent=GSCOCT00042908001 | |
| 59254 chr11 manual_curation CDS 18708998 18709066 . + 0 Parent=GSCOCT00042908001 | |
| 59255 chr11 manual_curation gene 18718931 18719095 . + . ID=GSCOCG00042910001;Name=Cc11_g04780 | |
| 59256 chr11 manual_curation mRNA 18718931 18719095 . + . ID=GSCOCT00042910001;Parent=GSCOCG00042910001;Name=Cc11_g04780 | |
| 59257 chr11 manual_curation polypeptide 18718931 18719095 . + . ID=GSCOCP00042910001;Dbxref=InterPro:IPR003676,PFAM:PF02519,TAIR:AT4G38840.1,TrEMBL:I1K717;Derives_from=GSCOCT00042910001;Name=Cc11_g04780;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:SAUR-like auxin-responsive protein family,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00042910001~ SAUR-like auxin-responsive protein family~ unknown_gene~ fragment;original_location=388155..388319;owner=coffea | |
| 59258 chr11 manual_curation exon 18718931 18719095 . + . Parent=GSCOCT00042910001 | |
| 59259 chr11 manual_curation CDS 18718931 18719095 . + 0 Parent=GSCOCT00042910001 | |
| 59260 chr11 manual_curation gene 18719162 18722091 . + . ID=GSCOCG00042911001;Name=Cc11_g04790 | |
| 59261 chr11 manual_curation mRNA 18719162 18722091 . + . ID=GSCOCT00042911001;Parent=GSCOCG00042911001;Name=Cc11_g04790 | |
| 59262 chr11 manual_curation polypeptide 18719162 18721896 . + . ID=GSCOCP00042911001;Dbxref=InterPro:IPR003676,PFAM:PF02519,SwissProt:P32295,SwissProt:P33080,SwissProt:P33081,TAIR:AT4G38840.1,TAIR:AT5G18050.1,TAIR:AT5G18060.1,TrEMBL:B9H122,TrEMBL:B9HRD2,TrEMBL:B9HRD8;Derives_from=GSCOCT00042911001;Name=Cc11_g04790;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Auxin-induced protein 15A,CC_functional_completeness:modules,CC_gene:ARG7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00042911001~ Auxin-induced protein 15A~ ARG7~ modules;original_location=join(388386..388446%2C390081..390116%2C390780..391120);owner=coffea | |
| 59263 chr11 manual_curation exon 18719162 18719222 . + . Parent=GSCOCT00042911001 | |
| 59264 chr11 manual_curation exon 18720857 18720892 . + . Parent=GSCOCT00042911001 | |
| 59265 chr11 manual_curation exon 18721556 18722091 . + . Parent=GSCOCT00042911001 | |
| 59266 chr11 manual_curation CDS 18719162 18719222 . + 0 Parent=GSCOCT00042911001 | |
| 59267 chr11 manual_curation CDS 18720857 18720892 . + 1 Parent=GSCOCT00042911001 | |
| 59268 chr11 manual_curation CDS 18721556 18721896 . + 1 Parent=GSCOCT00042911001 | |
| 59269 chr11 manual_curation gene 18912155 18912830 . - . ID=GSCOCG00042912001;Name=Cc11_g04800 | |
| 59270 chr11 manual_curation mRNA 18912155 18912830 . - . ID=GSCOCT00042912001;Parent=GSCOCG00042912001;Name=Cc11_g04800 | |
| 59271 chr11 manual_curation polypeptide 18912155 18912830 . - . ID=GSCOCP00042912001;Dbxref=InterPro:IPR003676,PFAM:PF02519,SwissProt:P33079,SwissProt:P33080,SwissProt:P33083,TAIR:AT4G38840.1,TAIR:AT5G18020.1,TAIR:AT5G18050.1,TrEMBL:B9HRD2,TrEMBL:B9HRD4,TrEMBL:I1K717;Derives_from=GSCOCT00042912001;Name=Cc11_g04800;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Auxin-induced protein X10A,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00042912001~ Auxin-induced protein X10A~ unknown_gene~ complete;original_location=complement(join(581855..582054%2C581379..581490));owner=coffea | |
| 59272 chr11 manual_curation exon 18912155 18912266 . - . Parent=GSCOCT00042912001 | |
| 59273 chr11 manual_curation exon 18912631 18912830 . - . Parent=GSCOCT00042912001 | |
| 59274 chr11 manual_curation CDS 18912155 18912266 . - 2 Parent=GSCOCT00042912001 | |
| 59275 chr11 manual_curation CDS 18912631 18912830 . - 0 Parent=GSCOCT00042912001 | |
| 59276 chr11 manual_curation gene 18927663 18929017 . + . ID=GSCOCG00042913001;Name=Cc11_g04810 | |
| 59277 chr11 manual_curation mRNA 18927663 18929017 . + . ID=GSCOCT00042913001;Parent=GSCOCG00042913001;Name=Cc11_g04810 | |
| 59278 chr11 manual_curation polypeptide 18927663 18929017 . + . ID=GSCOCP00042913001;Dbxref=GENE3D:G3DSA:2.70.98.10,InterPro:IPR008183,InterPro:IPR011013,InterPro:IPR014718,InterPro:IPR015443,PANTHER:PTHR10091,PFAM:PF01263,SUPERFAMILY:SSF74650,SwissProt:Q66HG4,SwissProt:Q96C23,SwissProt:Q9GKX6,TAIR:AT3G17940.1,TAIR:AT3G47800.1,TAIR:AT5G15140.1,TrEMBL:C7C5S9,TrEMBL:Q947H4,TrEMBL:Q947H5;Derives_from=GSCOCT00042913001;Name=Cc11_g04810;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0016853,GO:0019318,GO:0030246,CC_EC_number:5.1.3.3,PRODUCT:Putative Aldose 1-epimerase,CC_functional_completeness:fragment,CC_gene:Galm,CC_gene:GALM;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00042913001~ Putative Aldose 1-epimerase~ Galm~ fragment;original_location=join(596887..596946%2C597122..597281%2C597376..598090%2C598163..598241);owner=coffea | |
| 59279 chr11 manual_curation exon 18927663 18927722 . + . Parent=GSCOCT00042913001 | |
| 59280 chr11 manual_curation exon 18927898 18928057 . + . Parent=GSCOCT00042913001 | |
| 59281 chr11 manual_curation exon 18928152 18928866 . + . Parent=GSCOCT00042913001 | |
| 59282 chr11 manual_curation exon 18928939 18929017 . + . Parent=GSCOCT00042913001 | |
| 59283 chr11 manual_curation CDS 18927663 18927722 . + 0 Parent=GSCOCT00042913001 | |
| 59284 chr11 manual_curation CDS 18927898 18928057 . + 0 Parent=GSCOCT00042913001 | |
| 59285 chr11 manual_curation CDS 18928152 18928866 . + 1 Parent=GSCOCT00042913001 | |
| 59286 chr11 manual_curation CDS 18928939 18929017 . + 2 Parent=GSCOCT00042913001 | |
| 59287 chr11 manual_curation gene 19082097 19085276 . - . ID=GSCOCG00042918001;Name=Cc11_g04820 | |
| 59288 chr11 manual_curation mRNA 19082097 19085276 . - . ID=GSCOCT00042918001;Parent=GSCOCG00042918001;Name=Cc11_g04820 | |
| 59289 chr11 manual_curation polypeptide 19083366 19085276 . - . ID=GSCOCP00042918001;Dbxref=InterPro:IPR021099,PFAM:PF11955,TAIR:AT2G39120.1,TAIR:AT3G58520.1,TAIR:AT5G48040.1,TrEMBL:B9HLI2,TrEMBL:I1L0K4,TrEMBL:I1L0L9;Derives_from=GSCOCT00042918001;Name=Cc11_g04820;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Ubiquitin carboxyl-terminal hydrolase family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00042918001~ Ubiquitin carboxyl-terminal hydrolase family protein~ unknown_gene~ complete;original_location=complement(join(753250..754500%2C753150..753207%2C752590..752663));owner=coffea | |
| 59290 chr11 manual_curation exon 19082097 19083439 . - . Parent=GSCOCT00042918001 | |
| 59291 chr11 manual_curation exon 19083926 19083983 . - . Parent=GSCOCT00042918001 | |
| 59292 chr11 manual_curation exon 19084026 19085276 . - . Parent=GSCOCT00042918001 | |
| 59293 chr11 manual_curation CDS 19083366 19083439 . - 1 Parent=GSCOCT00042918001 | |
| 59294 chr11 manual_curation CDS 19083926 19083983 . - 0 Parent=GSCOCT00042918001 | |
| 59295 chr11 manual_curation CDS 19084026 19085276 . - 0 Parent=GSCOCT00042918001 | |
| 59296 chr11 manual_curation gene 19096670 19099297 . - . ID=GSCOCG00042919001;Name=Cc11_g04830 | |
| 59297 chr11 manual_curation mRNA 19096670 19099297 . - . ID=GSCOCT00042919001;Parent=GSCOCG00042919001;Name=Cc11_g04830 | |
| 59298 chr11 manual_curation polypeptide 19096670 19099297 . - . ID=GSCOCP00042919001;Dbxref=InterPro:IPR005834,InterPro:IPR006383,PFAM:PF00702,SwissProt:O82796,SwissProt:Q2KHU0,SwissProt:Q5RB83,TAIR:AT1G18640.2,TIGRFAMs:TIGR01488,TrEMBL:A9PCH8,TrEMBL:B9RLN8,TrEMBL:F6GSZ3;Derives_from=GSCOCT00042919001;Name=Cc11_g04830;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,GO:0016791,CC_EC_number:3.1.3.3,PRODUCT:Phosphoserine phosphatase%2C chloroplastic,CC_functional_completeness:complete,CC_gene:PSP,CC_gene:PSPH;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00042919001~ Phosphoserine phosphatase%2C chloroplastic~ PSP~ complete;original_location=complement(join(768414..768521%2C768113..768274%2C767959..768038%2C767170..767257%2C766535..766698%2C766424..766469%2C765894..766019));owner=coffea | |
| 59299 chr11 manual_curation exon 19096670 19096795 . - . Parent=GSCOCT00042919001 | |
| 59300 chr11 manual_curation exon 19097200 19097245 . - . Parent=GSCOCT00042919001 | |
| 59301 chr11 manual_curation exon 19097311 19097474 . - . Parent=GSCOCT00042919001 | |
| 59302 chr11 manual_curation exon 19097946 19098033 . - . Parent=GSCOCT00042919001 | |
| 59303 chr11 manual_curation exon 19098735 19098814 . - . Parent=GSCOCT00042919001 | |
| 59304 chr11 manual_curation exon 19098889 19099050 . - . Parent=GSCOCT00042919001 | |
| 59305 chr11 manual_curation exon 19099190 19099297 . - . Parent=GSCOCT00042919001 | |
| 59306 chr11 manual_curation CDS 19096670 19096795 . - 0 Parent=GSCOCT00042919001 | |
| 59307 chr11 manual_curation CDS 19097200 19097245 . - 2 Parent=GSCOCT00042919001 | |
| 59308 chr11 manual_curation CDS 19097311 19097474 . - 0 Parent=GSCOCT00042919001 | |
| 59309 chr11 manual_curation CDS 19097946 19098033 . - 2 Parent=GSCOCT00042919001 | |
| 59310 chr11 manual_curation CDS 19098735 19098814 . - 0 Parent=GSCOCT00042919001 | |
| 59311 chr11 manual_curation CDS 19098889 19099050 . - 0 Parent=GSCOCT00042919001 | |
| 59312 chr11 manual_curation CDS 19099190 19099297 . - 0 Parent=GSCOCT00042919001 | |
| 59313 chr11 manual_curation gene 19105347 19110153 . - . ID=GSCOCG00042920001;Name=Cc11_g04840 | |
| 59314 chr11 manual_curation mRNA 19105347 19110153 . - . ID=GSCOCT00042920001;Parent=GSCOCG00042920001;Name=Cc11_g04840 | |
| 59315 chr11 manual_curation polypeptide 19105347 19110153 . - . ID=GSCOCP00042920001;Dbxref=GENE3D:G3DSA:1.50.10.10,InterPro:IPR001701,InterPro:IPR008928,InterPro:IPR012341,PANTHER:PTHR22298:SF3,PFAM:PF00759,SUPERFAMILY:SSF48208,SwissProt:Q2V4L8,SwissProt:Q7XTH4,SwissProt:Q9C9H5,TAIR:AT1G02800.1,TAIR:AT1G22880.1,TAIR:AT1G71380.1,TrEMBL:D7SN09,TrEMBL:O22298,TrEMBL:Q6DMM3;Derives_from=GSCOCT00042920001;Name=Cc11_g04840;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,CC_EC_number:3.2.1.4,PRODUCT:Endoglucanase 9,CC_functional_completeness:fragment,CC_gene:CEL3,CC_gene:CEL5,CC_gene:GLU4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00042920001~ Endoglucanase 9~ CEL3~ fragment;original_location=complement(join(779358..779377%2C779056..779191%2C777971..778312%2C777386..777409%2C776932..777052%2C776710..776835%2C776434..776577%2C775656..775673%2C774944..775068%2C774571..774642));owner=coffea | |
| 59316 chr11 manual_curation exon 19105347 19105418 . - . Parent=GSCOCT00042920001 | |
| 59317 chr11 manual_curation exon 19105720 19105844 . - . Parent=GSCOCT00042920001 | |
| 59318 chr11 manual_curation exon 19106432 19106449 . - . Parent=GSCOCT00042920001 | |
| 59319 chr11 manual_curation exon 19107210 19107353 . - . Parent=GSCOCT00042920001 | |
| 59320 chr11 manual_curation exon 19107486 19107611 . - . Parent=GSCOCT00042920001 | |
| 59321 chr11 manual_curation exon 19107708 19107828 . - . Parent=GSCOCT00042920001 | |
| 59322 chr11 manual_curation exon 19108162 19108185 . - . Parent=GSCOCT00042920001 | |
| 59323 chr11 manual_curation exon 19108747 19109088 . - . Parent=GSCOCT00042920001 | |
| 59324 chr11 manual_curation exon 19109832 19109967 . - . Parent=GSCOCT00042920001 | |
| 59325 chr11 manual_curation exon 19110134 19110153 . - . Parent=GSCOCT00042920001 | |
| 59326 chr11 manual_curation CDS 19105347 19105418 . - 0 Parent=GSCOCT00042920001 | |
| 59327 chr11 manual_curation CDS 19105720 19105844 . - 1 Parent=GSCOCT00042920001 | |
| 59328 chr11 manual_curation CDS 19106432 19106449 . - 1 Parent=GSCOCT00042920001 | |
| 59329 chr11 manual_curation CDS 19107210 19107353 . - 1 Parent=GSCOCT00042920001 | |
| 59330 chr11 manual_curation CDS 19107486 19107611 . - 1 Parent=GSCOCT00042920001 | |
| 59331 chr11 manual_curation CDS 19107708 19107828 . - 0 Parent=GSCOCT00042920001 | |
| 59332 chr11 manual_curation CDS 19108162 19108185 . - 0 Parent=GSCOCT00042920001 | |
| 59333 chr11 manual_curation CDS 19108747 19109088 . - 0 Parent=GSCOCT00042920001 | |
| 59334 chr11 manual_curation CDS 19109832 19109967 . - 2 Parent=GSCOCT00042920001 | |
| 59335 chr11 manual_curation CDS 19110134 19110153 . - 0 Parent=GSCOCT00042920001 | |
| 59336 chr11 manual_curation gene 19162250 19162538 . + . ID=GSCOCG00042922001;Name=Cc11_g04850 | |
| 59337 chr11 manual_curation mRNA 19162250 19162538 . + . ID=GSCOCT00042922001;Parent=GSCOCG00042922001;Name=Cc11_g04850 | |
| 59338 chr11 manual_curation polypeptide 19162250 19162538 . + . ID=GSCOCP00042922001;Derives_from=GSCOCT00042922001;Name=Cc11_g04850;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00042922001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(831474..831608%2C831730..831762);owner=coffea | |
| 59339 chr11 manual_curation exon 19162250 19162384 . + . Parent=GSCOCT00042922001 | |
| 59340 chr11 manual_curation exon 19162506 19162538 . + . Parent=GSCOCT00042922001 | |
| 59341 chr11 manual_curation CDS 19162250 19162384 . + 0 Parent=GSCOCT00042922001 | |
| 59342 chr11 manual_curation CDS 19162506 19162538 . + 0 Parent=GSCOCT00042922001 | |
| 59343 chr11 manual_curation gene 19170741 19171192 . + . ID=GSCOCG00042924001;Name=Cc11_g04860 | |
| 59344 chr11 manual_curation mRNA 19170741 19171192 . + . ID=GSCOCT00042924001;Parent=GSCOCG00042924001;Name=Cc11_g04860 | |
| 59345 chr11 manual_curation polypeptide 19170741 19170911 . + . ID=GSCOCP00042924001;Derives_from=GSCOCT00042924001;Name=Cc11_g04860;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00042924001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=839965..840135;owner=coffea | |
| 59346 chr11 manual_curation exon 19170741 19171192 . + . Parent=GSCOCT00042924001 | |
| 59347 chr11 manual_curation CDS 19170741 19170911 . + 0 Parent=GSCOCT00042924001 | |
| 59348 chr11 manual_curation gene 19207784 19208329 . - . ID=GSCOCG00042929001;Name=Cc11_g04870 | |
| 59349 chr11 manual_curation mRNA 19207784 19208329 . - . ID=GSCOCT00042929001;Parent=GSCOCG00042929001;Name=Cc11_g04870 | |
| 59350 chr11 manual_curation polypeptide 19207784 19208329 . - . ID=GSCOCP00042929001;Dbxref=GENE3D:G3DSA:3.40.532.10,InterPro:IPR001578,PANTHER:PTHR10589,PFAM:PF01088,PRINTS:PR00707,SwissProt:P15374,SwissProt:Q2TBG8,SwissProt:Q9JKB1,TAIR:AT4G17510.1,TrEMBL:B9GYN0,TrEMBL:B9T288,TrEMBL:I1MV54;Derives_from=GSCOCT00042929001;Name=Cc11_g04870;Ontology_term=CC_evidence_code:ISS,GO:0004221,GO:0005622,GO:0006511,CC_EC_number:3.4.19.12,PRODUCT:Putative Ubiquitin carboxyl-terminal hydrolase isozyme L3,CC_functional_completeness:complete,CC_gene:UCHL3,CC_gene:Uchl3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00042929001~ Putative Ubiquitin carboxyl-terminal hydrolase isozyme L3~ UCHL3~ complete;original_location=complement(877008..877553);owner=coffea | |
| 59351 chr11 manual_curation exon 19207784 19208329 . - . Parent=GSCOCT00042929001 | |
| 59352 chr11 manual_curation CDS 19207784 19208329 . - 0 Parent=GSCOCT00042929001 | |
| 59353 chr11 manual_curation gene 19233012 19235233 . - . ID=GSCOCG00042930001;Name=Cc11_g04880 | |
| 59354 chr11 manual_curation mRNA 19233012 19235233 . - . ID=GSCOCT00042930001;Parent=GSCOCG00042930001;Name=Cc11_g04880 | |
| 59355 chr11 manual_curation polypeptide 19233012 19235233 . - . ID=GSCOCP00042930001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:O65790,SwissProt:P93147,SwissProt:Q9FG65,TAIR:AT4G37310.1,TAIR:AT5G10600.1,TAIR:AT5G10610.1,TrEMBL:A1XEH9,TrEMBL:C5NM78,TrEMBL:C5NM79;Derives_from=GSCOCT00042930001;Name=Cc11_g04880;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.89,PRODUCT:Putative Isoflavone 2'-hydroxylase,CC_functional_completeness:complete,CC_gene:CYP81E1,CC_gene:CYP81F1,CC_gene:CYP81D1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00042930001~ Putative Isoflavone 2'-hydroxylase~ CYP81E1~ complete;original_location=complement(join(903555..904457%2C902236..902889));owner=coffea | |
| 59356 chr11 manual_curation exon 19233012 19233665 . - . Parent=GSCOCT00042930001 | |
| 59357 chr11 manual_curation exon 19234331 19235233 . - . Parent=GSCOCT00042930001 | |
| 59358 chr11 manual_curation CDS 19233012 19233665 . - 0 Parent=GSCOCT00042930001 | |
| 59359 chr11 manual_curation CDS 19234331 19235233 . - 0 Parent=GSCOCT00042930001 | |
| 59360 chr11 manual_curation gene 19250303 19255838 . - . ID=GSCOCG00042931001;Name=Cc11_g04890 | |
| 59361 chr11 manual_curation mRNA 19250303 19255838 . - . ID=GSCOCT00042931001;Parent=GSCOCG00042931001;Name=Cc11_g04890 | |
| 59362 chr11 manual_curation polypeptide 19251339 19255838 . - . ID=GSCOCP00042931001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,InterPro:IPR021929,PFAM:PF00931,PFAM:PF12061,PRINTS:PR00364,SwissProt:Q60CZ8,SwissProt:Q6L403,SwissProt:Q6L438,TAIR:AT3G46530.1,TAIR:AT5G35450.1,TAIR:AT5G43470.1,TrEMBL:Q96485,TrEMBL:Q9LLD0,TrEMBL:Q9LLD4;Derives_from=GSCOCT00042931001;Name=Cc11_g04890;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative NB-ARC domain-containing disease resistance protein,CC_functional_completeness:modules,CC_gene:R1A-6,CC_gene:R1A-10,CC_gene:R1B-17;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00042931001~ Putative NB-ARC domain-containing disease resistance protein~ R1A-6~ modules;original_location=complement(join(921697..925062%2C920563..921651));owner=coffea | |
| 59363 chr11 manual_curation exon 19250303 19252427 . - . Parent=GSCOCT00042931001 | |
| 59364 chr11 manual_curation exon 19252473 19255838 . - . Parent=GSCOCT00042931001 | |
| 59365 chr11 manual_curation CDS 19251339 19252427 . - 0 Parent=GSCOCT00042931001 | |
| 59366 chr11 manual_curation CDS 19252473 19255838 . - 0 Parent=GSCOCT00042931001 | |
| 59367 chr11 manual_curation gene 19347012 19348169 . - . ID=GSCOCG00042936001;Name=Cc11_g04900 | |
| 59368 chr11 manual_curation mRNA 19347012 19348169 . - . ID=GSCOCT00042936001;Parent=GSCOCG00042936001;Name=Cc11_g04900 | |
| 59369 chr11 manual_curation polypeptide 19347012 19348169 . - . ID=GSCOCP00042936001;Dbxref=GENE3D:G3DSA:1.20.140.40,GENE3D:G3DSA:2.160.20.10,InterPro:IPR000070,InterPro:IPR006501,InterPro:IPR011050,InterPro:IPR012334,PFAM:PF01095,PFAM:PF04043,SMART:SM00856,SUPERFAMILY:SSF101148,SUPERFAMILY:SSF51126,SwissProt:O81301,SwissProt:O81415,SwissProt:Q42534,TAIR:AT1G53830.1,TAIR:AT4G02300.1,TAIR:AT4G02320.1,TIGRFAMs:TIGR01614,TrEMBL:B9SAU4,TrEMBL:C4N552,TrEMBL:F6HZ64;Derives_from=GSCOCT00042936001;Name=Cc11_g04900;Ontology_term=CC_evidence_code:ISS,GO:0004857,GO:0005618,GO:0030599,GO:0042545,CC_EC_number:3.1.1.11,PRODUCT:Putative Pectinesterase 2,CC_functional_completeness:fragment,CC_gene:PME40,CC_gene:PME39,CC_gene:PME2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00042936001~ Putative Pectinesterase 2~ PME40~ fragment;original_location=complement(1016236..1017393);owner=coffea | |
| 59370 chr11 manual_curation exon 19347012 19348169 . - . Parent=GSCOCT00042936001 | |
| 59371 chr11 manual_curation CDS 19347012 19348169 . - 0 Parent=GSCOCT00042936001 | |
| 59372 chr11 manual_curation gene 19397103 19405312 . - . ID=GSCOCG00042937001;Name=Cc11_g04910 | |
| 59373 chr11 manual_curation mRNA 19397103 19405312 . - . ID=GSCOCT00042937001;Parent=GSCOCG00042937001;Name=Cc11_g04910 | |
| 59374 chr11 manual_curation polypeptide 19397103 19405312 . - . ID=GSCOCP00042937001;Dbxref=GENE3D:G3DSA:1.20.140.40,GENE3D:G3DSA:2.160.20.10,InterPro:IPR000070,InterPro:IPR006501,InterPro:IPR011050,InterPro:IPR012334,InterPro:IPR018040,PFAM:PF01095,PFAM:PF04043,PROSITE:PS00503,SMART:SM00856,SUPERFAMILY:SSF101148,SUPERFAMILY:SSF51126,SwissProt:O81301,SwissProt:O81415,SwissProt:P85076,TAIR:AT1G53830.1,TAIR:AT4G02300.1,TAIR:AT4G02320.1,TIGRFAMs:TIGR01614,TrEMBL:B9GSC5,TrEMBL:B9SAU4,TrEMBL:F6HZ64;Derives_from=GSCOCT00042937001;Name=Cc11_g04910;Ontology_term=CC_evidence_code:ISS,GO:0004857,GO:0005618,GO:0030599,GO:0042545,CC_EC_number:3.1.1.11,PRODUCT:Probable pectinesterase/pectinesterase inhibitor 40,CC_functional_completeness:complete,CC_gene:PME40,CC_gene:PME39;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00042937001~ Probable pectinesterase/pectinesterase inhibitor 40~ PME40~ complete;original_location=complement(join(1073474..1074536%2C1066327..1067027));owner=coffea | |
| 59375 chr11 manual_curation exon 19397103 19397803 . - . Parent=GSCOCT00042937001 | |
| 59376 chr11 manual_curation exon 19404250 19405312 . - . Parent=GSCOCT00042937001 | |
| 59377 chr11 manual_curation CDS 19397103 19397803 . - 1 Parent=GSCOCT00042937001 | |
| 59378 chr11 manual_curation CDS 19404250 19405312 . - 0 Parent=GSCOCT00042937001 | |
| 59379 chr11 manual_curation gene 19488296 19488850 . - . ID=GSCOCG00042939001;Name=Cc11_g04920 | |
| 59380 chr11 manual_curation mRNA 19488296 19488850 . - . ID=GSCOCT00042939001;Parent=GSCOCG00042939001;Name=Cc11_g04920 | |
| 59381 chr11 manual_curation polypeptide 19488296 19488850 . - . ID=GSCOCP00042939001;Dbxref=GENE3D:G3DSA:1.20.140.40,InterPro:IPR006501,PFAM:PF04043,SMART:SM00856,SUPERFAMILY:SSF101148,SwissProt:P83326,SwissProt:Q8GT41,SwissProt:Q9LUV1,TAIR:AT1G48020.1,TAIR:AT3G17220.1,TAIR:AT5G46940.1,TIGRFAMs:TIGR01614,TrEMBL:A5BDU4,TrEMBL:A7IZL3,TrEMBL:D7L6Q2;Derives_from=GSCOCT00042939001;Name=Cc11_g04920;Ontology_term=CC_evidence_code:ISS,GO:0004857,GO:0030599,CC_EC_number:missing_EC_number,PRODUCT:Putative Pectinesterase inhibitor,CC_functional_completeness:complete,CC_gene:PMEI,CC_gene:PMEI2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00042939001~ Putative Pectinesterase inhibitor~ PMEI~ complete;original_location=complement(1157520..1158074);owner=coffea | |
| 59382 chr11 manual_curation exon 19488296 19488850 . - . Parent=GSCOCT00042939001 | |
| 59383 chr11 manual_curation CDS 19488296 19488850 . - 0 Parent=GSCOCT00042939001 | |
| 59384 chr11 manual_curation gene 19510127 19510615 . + . ID=GSCOCG00042940001;Name=Cc11_g04930 | |
| 59385 chr11 manual_curation mRNA 19510127 19510615 . + . ID=GSCOCT00042940001;Parent=GSCOCG00042940001;Name=Cc11_g04930 | |
| 59386 chr11 manual_curation polypeptide 19510127 19510615 . + . ID=GSCOCP00042940001;Dbxref=GENE3D:G3DSA:3.30.300.90,InterPro:IPR002634,PANTHER:PTHR12735,PFAM:PF01722,SUPERFAMILY:SSF82657,TAIR:AT5G17560.1,TrEMBL:B9SDE8,TrEMBL:F6HE85,TrEMBL:I1JB41;Derives_from=GSCOCT00042940001;Name=Cc11_g04930;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00042940001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=1179351..1179839;owner=coffea | |
| 59387 chr11 manual_curation exon 19510127 19510615 . + . Parent=GSCOCT00042940001 | |
| 59388 chr11 manual_curation CDS 19510127 19510615 . + 0 Parent=GSCOCT00042940001 | |
| 59389 chr11 manual_curation gene 19577390 19581224 . + . ID=GSCOCG00042941001;Name=Cc11_g04940 | |
| 59390 chr11 manual_curation mRNA 19577390 19581224 . + . ID=GSCOCT00042941001;Parent=GSCOCG00042941001;Name=Cc11_g04940 | |
| 59391 chr11 manual_curation polypeptide 19577390 19581224 . + . ID=GSCOCP00042941001;Dbxref=GENE3D:G3DSA:2.160.20.10,InterPro:IPR000070,InterPro:IPR011050,InterPro:IPR012334,PFAM:PF01095,SUPERFAMILY:SSF51126,SwissProt:O23038,SwissProt:Q9ZQA3,SwissProt:Q9ZQA4,TAIR:AT1G05310.1,TAIR:AT2G36700.1,TAIR:AT2G36710.1,TrEMBL:B9MTJ5,TrEMBL:B9S0A6,TrEMBL:I1NAE9;Derives_from=GSCOCT00042941001;Name=Cc11_g04940;Ontology_term=CC_evidence_code:ISS,GO:0005618,GO:0030599,GO:0042545,CC_EC_number:3.1.1.11,PRODUCT:Probable pectinesterase 15,CC_functional_completeness:fragment,CC_gene:PME15,CC_gene:PME8,CC_gene:PME14;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00042941001~ Probable pectinesterase 15~ PME15~ fragment;original_location=join(1246614..1246662%2C1247015..1247220%2C1250368..1250448);owner=coffea | |
| 59392 chr11 manual_curation exon 19577390 19577438 . + . Parent=GSCOCT00042941001 | |
| 59393 chr11 manual_curation exon 19577791 19577996 . + . Parent=GSCOCT00042941001 | |
| 59394 chr11 manual_curation exon 19581144 19581224 . + . Parent=GSCOCT00042941001 | |
| 59395 chr11 manual_curation CDS 19577390 19577438 . + 0 Parent=GSCOCT00042941001 | |
| 59396 chr11 manual_curation CDS 19577791 19577996 . + 1 Parent=GSCOCT00042941001 | |
| 59397 chr11 manual_curation CDS 19581144 19581224 . + 0 Parent=GSCOCT00042941001 | |
| 59398 chr11 manual_curation gene 19727212 19729245 . - . ID=GSCOCG00020422001;Name=Cc11_g04950 | |
| 59399 chr11 manual_curation mRNA 19727212 19729245 . - . ID=GSCOCT00020422001;Parent=GSCOCG00020422001;Name=Cc11_g04950 | |
| 59400 chr11 manual_curation polypeptide 19727212 19729245 . - . ID=GSCOCP00020422001;Dbxref=InterPro:IPR000767,InterPro:IPR001611,InterPro:IPR002182,PFAM:PF00560,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q38834,SwissProt:Q39214,SwissProt:Q9C646,TAIR:AT1G59620.1,TAIR:AT3G07040.1,TAIR:AT3G50950.2,TrEMBL:A5BE05,TrEMBL:B9MU97,TrEMBL:F6HT13;Derives_from=GSCOCT00020422001;Name=Cc11_g04950;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative Disease resistance RPP13-like protein 4,CC_functional_completeness:fragment,CC_gene:RPM1,CC_gene:RPP13L4,CC_gene:RXW24L;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020422001~ Putative Disease resistance RPP13-like protein 4~ RPM1~ fragment;original_location=complement(join(1751..2035%2C1567..1588%2C387..1464%2C2..314));owner=coffea | |
| 59401 chr11 manual_curation exon 19727212 19727524 . - . Parent=GSCOCT00020422001 | |
| 59402 chr11 manual_curation exon 19727597 19728674 . - . Parent=GSCOCT00020422001 | |
| 59403 chr11 manual_curation exon 19728777 19728798 . - . Parent=GSCOCT00020422001 | |
| 59404 chr11 manual_curation exon 19728961 19729245 . - . Parent=GSCOCT00020422001 | |
| 59405 chr11 manual_curation CDS 19727212 19727524 . - 2 Parent=GSCOCT00020422001 | |
| 59406 chr11 manual_curation CDS 19727597 19728674 . - 1 Parent=GSCOCT00020422001 | |
| 59407 chr11 manual_curation CDS 19728777 19728798 . - 0 Parent=GSCOCT00020422001 | |
| 59408 chr11 manual_curation CDS 19728961 19729245 . - 0 Parent=GSCOCT00020422001 | |
| 59409 chr11 manual_curation gene 19740803 19742305 . + . ID=GSCOCG00020423001;Name=Cc11_g04960 | |
| 59410 chr11 manual_curation mRNA 19740803 19742305 . + . ID=GSCOCT00020423001;Parent=GSCOCG00020423001;Name=Cc11_g04960 | |
| 59411 chr11 manual_curation polypeptide 19740803 19741018 . + . ID=GSCOCP00020423001;Derives_from=GSCOCT00020423001;Name=Cc11_g04960;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020423001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=13593..13808;owner=coffea | |
| 59412 chr11 manual_curation exon 19740803 19742305 . + . Parent=GSCOCT00020423001 | |
| 59413 chr11 manual_curation CDS 19740803 19741018 . + 0 Parent=GSCOCT00020423001 | |
| 59414 chr11 manual_curation gene 19749738 19761507 . + . ID=GSCOCG00020425001;Name=Cc11_g04970 | |
| 59415 chr11 manual_curation mRNA 19749738 19761507 . + . ID=GSCOCT00020425001;Parent=GSCOCG00020425001;Name=Cc11_g04970 | |
| 59416 chr11 manual_curation polypeptide 19749832 19760944 . + . ID=GSCOCP00020425001;Dbxref=TAIR:AT1G09290.1,TrEMBL:B9S7B4,TrEMBL:D7SMG7,TrEMBL:I1NFA6;Derives_from=GSCOCT00020425001;Name=Cc11_g04970;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B Has 73 Blast hits to 71 proteins in 26 species,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020425001~ unknown protein%3B Has 73 Blast hits to 71 proteins in 26 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 5%3B Fungi - 11%3B Plants - 54%3B Viruses - 0%3B Other Eukaryotes - 3 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(22622..22766%2C22947..22993%2C26665..26818%2C30033..30243%2C33018..33147%2C33326..33502%2C33597..33734);owner=coffea | |
| 59417 chr11 manual_curation exon 19749738 19749976 . + . Parent=GSCOCT00020425001 | |
| 59418 chr11 manual_curation exon 19750157 19750203 . + . Parent=GSCOCT00020425001 | |
| 59419 chr11 manual_curation exon 19753875 19754028 . + . Parent=GSCOCT00020425001 | |
| 59420 chr11 manual_curation exon 19757243 19757453 . + . Parent=GSCOCT00020425001 | |
| 59421 chr11 manual_curation exon 19760228 19760357 . + . Parent=GSCOCT00020425001 | |
| 59422 chr11 manual_curation exon 19760536 19760712 . + . Parent=GSCOCT00020425001 | |
| 59423 chr11 manual_curation exon 19760807 19761507 . + . Parent=GSCOCT00020425001 | |
| 59424 chr11 manual_curation CDS 19749832 19749976 . + 0 Parent=GSCOCT00020425001 | |
| 59425 chr11 manual_curation CDS 19750157 19750203 . + 1 Parent=GSCOCT00020425001 | |
| 59426 chr11 manual_curation CDS 19753875 19754028 . + 0 Parent=GSCOCT00020425001 | |
| 59427 chr11 manual_curation CDS 19757243 19757453 . + 1 Parent=GSCOCT00020425001 | |
| 59428 chr11 manual_curation CDS 19760228 19760357 . + 2 Parent=GSCOCT00020425001 | |
| 59429 chr11 manual_curation CDS 19760536 19760712 . + 0 Parent=GSCOCT00020425001 | |
| 59430 chr11 manual_curation CDS 19760807 19760944 . + 0 Parent=GSCOCT00020425001 | |
| 59431 chr11 manual_curation gene 19764626 19768680 . - . ID=GSCOCG00020426001;Name=Cc11_g04980 | |
| 59432 chr11 manual_curation mRNA 19764626 19768680 . - . ID=GSCOCT00020426001;Parent=GSCOCG00020426001;Name=Cc11_g04980 | |
| 59433 chr11 manual_curation polypeptide 19764764 19768680 . - . ID=GSCOCP00020426001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR006447,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR014778,InterPro:IPR017930,PFAM:PF00249,PROFILE:PS51294,SUPERFAMILY:SSF46689,SwissProt:Q0J235,SwissProt:Q700D9,SwissProt:Q9C616,TAIR:AT1G14600.1,TAIR:AT2G02060.1,TAIR:AT2G38300.1,TIGRFAMs:TIGR01557,TrEMBL:A5BAM2,TrEMBL:B9S7B5,TrEMBL:D7SMG8;Derives_from=GSCOCT00020426001;Name=Cc11_g04980;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:At1g14600,CC_gene:KAN2,CC_gene:RL9;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020426001~ Putative uncharacterized protein~ At1g14600~ complete;original_location=complement(join(41344..41470%2C41147..41223%2C40986..41022%2C40255..40396%2C39734..40028%2C37554..37823));owner=coffea | |
| 59434 chr11 manual_curation exon 19764626 19765033 . - . Parent=GSCOCT00020426001 | |
| 59435 chr11 manual_curation exon 19766944 19767238 . - . Parent=GSCOCT00020426001 | |
| 59436 chr11 manual_curation exon 19767465 19767606 . - . Parent=GSCOCT00020426001 | |
| 59437 chr11 manual_curation exon 19768196 19768232 . - . Parent=GSCOCT00020426001 | |
| 59438 chr11 manual_curation exon 19768357 19768433 . - . Parent=GSCOCT00020426001 | |
| 59439 chr11 manual_curation exon 19768554 19768680 . - . Parent=GSCOCT00020426001 | |
| 59440 chr11 manual_curation CDS 19764764 19765033 . - 0 Parent=GSCOCT00020426001 | |
| 59441 chr11 manual_curation CDS 19766944 19767238 . - 2 Parent=GSCOCT00020426001 | |
| 59442 chr11 manual_curation CDS 19767465 19767606 . - 1 Parent=GSCOCT00020426001 | |
| 59443 chr11 manual_curation CDS 19768196 19768232 . - 0 Parent=GSCOCT00020426001 | |
| 59444 chr11 manual_curation CDS 19768357 19768433 . - 1 Parent=GSCOCT00020426001 | |
| 59445 chr11 manual_curation CDS 19768554 19768680 . - 0 Parent=GSCOCT00020426001 | |
| 59446 chr11 manual_curation gene 19809349 19813001 . + . ID=GSCOCG00020432001;Name=Cc11_g04990 | |
| 59447 chr11 manual_curation mRNA 19809349 19813001 . + . ID=GSCOCT00020432001;Parent=GSCOCG00020432001;Name=Cc11_g04990 | |
| 59448 chr11 manual_curation polypeptide 19810335 19813001 . + . ID=GSCOCP00020432001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR020635,InterPro:IPR021720,PFAM:PF07714,PFAM:PF11721,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q9FID8,SwissProt:Q9FID9,SwissProt:Q9SCZ4,TAIR:AT3G51550.1,TAIR:AT5G38990.1,TAIR:AT5G39000.1,TrEMBL:B9N6M5,TrEMBL:B9NBM4,TrEMBL:F6H469;Derives_from=GSCOCT00020432001;Name=Cc11_g04990;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Receptor-like protein kinase FERONIA,CC_functional_completeness:complete,CC_gene:FER,CC_gene:At5g39000,CC_gene:At5g38990;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020432001~ Receptor-like protein kinase FERONIA~ FER~ complete;original_location=83125..85791;owner=coffea | |
| 59449 chr11 manual_curation exon 19809349 19813001 . + . Parent=GSCOCT00020432001 | |
| 59450 chr11 manual_curation CDS 19810335 19813001 . + 0 Parent=GSCOCT00020432001 | |
| 59451 chr11 manual_curation gene 19847381 19850701 . + . ID=GSCOCG00020436001;Name=Cc11_g05000 | |
| 59452 chr11 manual_curation mRNA 19847381 19850701 . + . ID=GSCOCT00020436001;Parent=GSCOCG00020436001;Name=Cc11_g05000 | |
| 59453 chr11 manual_curation polypeptide 19848023 19850701 . + . ID=GSCOCP00020436001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR020635,InterPro:IPR021720,PFAM:PF07714,PFAM:PF11721,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q9FID8,SwissProt:Q9FID9,SwissProt:Q9SCZ4,TAIR:AT3G51550.1,TAIR:AT5G38990.1,TAIR:AT5G39000.1,TrEMBL:B9NBM4,TrEMBL:B9SYC6,TrEMBL:F6H469;Derives_from=GSCOCT00020436001;Name=Cc11_g05000;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Receptor-like protein kinase FERONIA,CC_functional_completeness:complete,CC_gene:FER,CC_gene:At5g39000,CC_gene:At5g38990;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020436001~ Receptor-like protein kinase FERONIA~ FER~ complete;original_location=120813..123491;owner=coffea | |
| 59454 chr11 manual_curation exon 19847381 19850701 . + . Parent=GSCOCT00020436001 | |
| 59455 chr11 manual_curation CDS 19848023 19850701 . + 0 Parent=GSCOCT00020436001 | |
| 59456 chr11 manual_curation gene 19856042 19860969 . - . ID=GSCOCG00020437001;Name=Cc11_g05010 | |
| 59457 chr11 manual_curation mRNA 19856042 19860969 . - . ID=GSCOCT00020437001;Parent=GSCOCG00020437001;Name=Cc11_g05010 | |
| 59458 chr11 manual_curation polypeptide 19856312 19860806 . - . ID=GSCOCP00020437001;Dbxref=InterPro:IPR008698,PANTHER:PTHR20900,PFAM:PF05676,SwissProt:Q54V61,SwissProt:Q9SKC9,TAIR:AT2G02050.1,TrEMBL:C6SZG1,TrEMBL:C7SI17,TrEMBL:E5F708;Derives_from=GSCOCT00020437001;Name=Cc11_g05010;Ontology_term=CC_evidence_code:ISS,GO:0003954,GO:0005739,GO:0008137,CC_EC_number:missing_EC_number,CC_EC_number:missing_EC_number,PRODUCT:Putative NADH,CC_functional_completeness:complete,CC_gene:At2g02050,CC_gene:ndufb7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020437001~ Putative NADH:ubiquinone oxidoreductase%2C B18 subunit~ At2g02050~ complete;original_location=complement(join(133402..133596%2C133281..133340%2C129102..129131));owner=coffea | |
| 59459 chr11 manual_curation exon 19856042 19856341 . - . Parent=GSCOCT00020437001 | |
| 59460 chr11 manual_curation exon 19860491 19860550 . - . Parent=GSCOCT00020437001 | |
| 59461 chr11 manual_curation exon 19860612 19860969 . - . Parent=GSCOCT00020437001 | |
| 59462 chr11 manual_curation CDS 19856312 19856341 . - 0 Parent=GSCOCT00020437001 | |
| 59463 chr11 manual_curation CDS 19860491 19860550 . - 0 Parent=GSCOCT00020437001 | |
| 59464 chr11 manual_curation CDS 19860612 19860806 . - 0 Parent=GSCOCT00020437001 | |
| 59465 chr11 manual_curation gene 19878832 19879299 . - . ID=GSCOCG00020440001;Name=Cc11_g05020 | |
| 59466 chr11 manual_curation mRNA 19878832 19879299 . - . ID=GSCOCT00020440001;Parent=GSCOCG00020440001;Name=Cc11_g05020 | |
| 59467 chr11 manual_curation polypeptide 19878832 19879299 . - . ID=GSCOCP00020440001;Dbxref=SwissProt:Q9LH76,SwissProt:Q9LPG6,TAIR:AT1G53500.1,TAIR:AT3G14790.1,TrEMBL:I1KTG8,TrEMBL:Q10N92;Derives_from=GSCOCT00020440001;Name=Cc11_g05020;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Probable rhamnose biosynthetic enzyme 3,CC_functional_completeness:fragment,CC_gene:RHM1,CC_gene:RHM3,CC_gene:RHM2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020440001~ Probable rhamnose biosynthetic enzyme 3~ RHM1~ fragment;original_location=complement(151622..152089);owner=coffea | |
| 59468 chr11 manual_curation exon 19878832 19879299 . - . Parent=GSCOCT00020440001 | |
| 59469 chr11 manual_curation CDS 19878832 19879299 . - 0 Parent=GSCOCT00020440001 | |
| 59470 chr11 manual_curation gene 19886060 19887835 . + . ID=GSCOCG00020441001;Name=Cc11_g05030 | |
| 59471 chr11 manual_curation mRNA 19886060 19887835 . + . ID=GSCOCT00020441001;Parent=GSCOCG00020441001;Name=Cc11_g05030 | |
| 59472 chr11 manual_curation polypeptide 19886231 19887580 . + . ID=GSCOCP00020441001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR011009,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q9FHG4,SwissProt:Q9LK03,SwissProt:Q9LMN8,TAIR:AT1G51940.1,TAIR:AT3G57120.1,TAIR:AT5G55830.1,TrEMBL:A5AI07,TrEMBL:B9STW3,TrEMBL:I1M4I3;Derives_from=GSCOCT00020441001;Name=Cc11_g05030;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Protein kinase superfamily protein,CC_functional_completeness:complete,CC_gene:PERK2,CC_gene:LECRKS7,CC_gene:WAK3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020441001~ Protein kinase superfamily protein~ PERK2~ complete;original_location=159021..160370;owner=coffea | |
| 59473 chr11 manual_curation exon 19886060 19887835 . + . Parent=GSCOCT00020441001 | |
| 59474 chr11 manual_curation CDS 19886231 19887580 . + 0 Parent=GSCOCT00020441001 | |
| 59475 chr11 manual_curation gene 19889924 19914335 . + . ID=GSCOCG00020442001;Name=Cc11_g05040 | |
| 59476 chr11 manual_curation mRNA 19889924 19914335 . + . ID=GSCOCT00020442001;Parent=GSCOCG00020442001;Name=Cc11_g05040 | |
| 59477 chr11 manual_curation polypeptide 19890252 19913907 . + . ID=GSCOCP00020442001;Dbxref=InterPro:IPR000150,InterPro:IPR001757,InterPro:IPR005834,InterPro:IPR006544,InterPro:IPR008250,InterPro:IPR018303,PANTHER:PTHR11939,PFAM:PF00122,PFAM:PF00702,PRINTS:PR00119,PROSITE:PS00154,PROSITE:PS01229,SwissProt:Q9EPE9,SwissProt:Q9HD20,SwissProt:Q9LT02,TAIR:AT3G22910.1,TAIR:AT4G00900.1,TAIR:AT5G23630.1,TIGRFAMs:TIGR01494,TIGRFAMs:TIGR01657,TrEMBL:B9N598,TrEMBL:B9RHM6,TrEMBL:F6HGI4;Derives_from=GSCOCT00020442001;Name=Cc11_g05040;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005524,GO:0006754,GO:0006812,GO:0008152,GO:0016020,GO:0016021,GO:0016787,GO:0016887,CC_EC_number:3.6.3.8,CC_EC_number:3.6.3.8,PRODUCT:Probable cation-transporting ATPase,CC_functional_completeness:complete,CC_gene:At5g23630,CC_gene:Atp13a1,CC_gene:ATP13A1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020442001~ Probable cation-transporting ATPase~ At5g23630~ complete;original_location=join(163042..163290%2C167148..167237%2C170016..170218%2C170963..171035%2C171167..171339%2C171457..171628%2C173178..173282%2C173369..173479%2C173586..173672%2C173838..174020%2C175989..176039%2C176124..176249%2C177958..178037%2C180740..180848%2C181604..181732%2C182852..182917%2C183049..183120%2C183352..183503%2C183807..183918%2C183998..184114%2C185600..186697);owner=coffea | |
| 59478 chr11 manual_curation exon 19889924 19890087 . + . Parent=GSCOCT00020442001 | |
| 59479 chr11 manual_curation exon 19890213 19890500 . + . Parent=GSCOCT00020442001 | |
| 59480 chr11 manual_curation exon 19894358 19894447 . + . Parent=GSCOCT00020442001 | |
| 59481 chr11 manual_curation exon 19897226 19897428 . + . Parent=GSCOCT00020442001 | |
| 59482 chr11 manual_curation exon 19898173 19898245 . + . Parent=GSCOCT00020442001 | |
| 59483 chr11 manual_curation exon 19898377 19898549 . + . Parent=GSCOCT00020442001 | |
| 59484 chr11 manual_curation exon 19898667 19898838 . + . Parent=GSCOCT00020442001 | |
| 59485 chr11 manual_curation exon 19900388 19900492 . + . Parent=GSCOCT00020442001 | |
| 59486 chr11 manual_curation exon 19900579 19900689 . + . Parent=GSCOCT00020442001 | |
| 59487 chr11 manual_curation exon 19900796 19900882 . + . Parent=GSCOCT00020442001 | |
| 59488 chr11 manual_curation exon 19901048 19901230 . + . Parent=GSCOCT00020442001 | |
| 59489 chr11 manual_curation exon 19903199 19903249 . + . Parent=GSCOCT00020442001 | |
| 59490 chr11 manual_curation exon 19903334 19903459 . + . Parent=GSCOCT00020442001 | |
| 59491 chr11 manual_curation exon 19905168 19905247 . + . Parent=GSCOCT00020442001 | |
| 59492 chr11 manual_curation exon 19907950 19908058 . + . Parent=GSCOCT00020442001 | |
| 59493 chr11 manual_curation exon 19908814 19908942 . + . Parent=GSCOCT00020442001 | |
| 59494 chr11 manual_curation exon 19910062 19910127 . + . Parent=GSCOCT00020442001 | |
| 59495 chr11 manual_curation exon 19910259 19910330 . + . Parent=GSCOCT00020442001 | |
| 59496 chr11 manual_curation exon 19910562 19910713 . + . Parent=GSCOCT00020442001 | |
| 59497 chr11 manual_curation exon 19911017 19911128 . + . Parent=GSCOCT00020442001 | |
| 59498 chr11 manual_curation exon 19911208 19911324 . + . Parent=GSCOCT00020442001 | |
| 59499 chr11 manual_curation exon 19912810 19914335 . + . Parent=GSCOCT00020442001 | |
| 59500 chr11 manual_curation CDS 19890252 19890500 . + 0 Parent=GSCOCT00020442001 | |
| 59501 chr11 manual_curation CDS 19894358 19894447 . + 0 Parent=GSCOCT00020442001 | |
| 59502 chr11 manual_curation CDS 19897226 19897428 . + 0 Parent=GSCOCT00020442001 | |
| 59503 chr11 manual_curation CDS 19898173 19898245 . + 2 Parent=GSCOCT00020442001 | |
| 59504 chr11 manual_curation CDS 19898377 19898549 . + 0 Parent=GSCOCT00020442001 | |
| 59505 chr11 manual_curation CDS 19898667 19898838 . + 2 Parent=GSCOCT00020442001 | |
| 59506 chr11 manual_curation CDS 19900388 19900492 . + 0 Parent=GSCOCT00020442001 | |
| 59507 chr11 manual_curation CDS 19900579 19900689 . + 0 Parent=GSCOCT00020442001 | |
| 59508 chr11 manual_curation CDS 19900796 19900882 . + 0 Parent=GSCOCT00020442001 | |
| 59509 chr11 manual_curation CDS 19901048 19901230 . + 0 Parent=GSCOCT00020442001 | |
| 59510 chr11 manual_curation CDS 19903199 19903249 . + 0 Parent=GSCOCT00020442001 | |
| 59511 chr11 manual_curation CDS 19903334 19903459 . + 0 Parent=GSCOCT00020442001 | |
| 59512 chr11 manual_curation CDS 19905168 19905247 . + 0 Parent=GSCOCT00020442001 | |
| 59513 chr11 manual_curation CDS 19907950 19908058 . + 2 Parent=GSCOCT00020442001 | |
| 59514 chr11 manual_curation CDS 19908814 19908942 . + 0 Parent=GSCOCT00020442001 | |
| 59515 chr11 manual_curation CDS 19910062 19910127 . + 0 Parent=GSCOCT00020442001 | |
| 59516 chr11 manual_curation CDS 19910259 19910330 . + 0 Parent=GSCOCT00020442001 | |
| 59517 chr11 manual_curation CDS 19910562 19910713 . + 0 Parent=GSCOCT00020442001 | |
| 59518 chr11 manual_curation CDS 19911017 19911128 . + 2 Parent=GSCOCT00020442001 | |
| 59519 chr11 manual_curation CDS 19911208 19911324 . + 0 Parent=GSCOCT00020442001 | |
| 59520 chr11 manual_curation CDS 19912810 19913907 . + 0 Parent=GSCOCT00020442001 | |
| 59521 chr11 manual_curation gene 19916605 19919124 . - . ID=GSCOCG00020445001;Name=Cc11_g05050 | |
| 59522 chr11 manual_curation mRNA 19916605 19919124 . - . ID=GSCOCT00020445001;Parent=GSCOCG00020445001;Name=Cc11_g05050 | |
| 59523 chr11 manual_curation polypeptide 19916605 19919124 . - . ID=GSCOCP00020445001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:P0C899,SwissProt:Q9LTV8,SwissProt:Q9LW32,TAIR:AT3G12770.1,TAIR:AT3G26782.1,TAIR:AT3G49142.1,TIGRFAMs:TIGR00756,TrEMBL:F6H438,TrEMBL:I1MLB3,TrEMBL:Q2HUK9;Derives_from=GSCOCT00020445001;Name=Cc11_g05050;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At3g26782%2C mitochondrial,CC_functional_completeness:complete,CC_gene:PCMP-H34,CC_gene:PCMP-H43,CC_gene:PCMP-H77;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020445001~ Pentatricopeptide repeat-containing protein At3g26782%2C mitochondrial~ PCMP-H34~ complete;original_location=complement(join(191901..191914%2C191785..191831%2C190892..191346%2C189395..190717));owner=coffea | |
| 59524 chr11 manual_curation exon 19916605 19917927 . - . Parent=GSCOCT00020445001 | |
| 59525 chr11 manual_curation exon 19918102 19918556 . - . Parent=GSCOCT00020445001 | |
| 59526 chr11 manual_curation exon 19918995 19919041 . - . Parent=GSCOCT00020445001 | |
| 59527 chr11 manual_curation exon 19919111 19919124 . - . Parent=GSCOCT00020445001 | |
| 59528 chr11 manual_curation CDS 19916605 19917927 . - 0 Parent=GSCOCT00020445001 | |
| 59529 chr11 manual_curation CDS 19918102 19918556 . - 1 Parent=GSCOCT00020445001 | |
| 59530 chr11 manual_curation CDS 19918995 19919041 . - 2 Parent=GSCOCT00020445001 | |
| 59531 chr11 manual_curation CDS 19919111 19919124 . - 0 Parent=GSCOCT00020445001 | |
| 59532 chr11 manual_curation gene 19924684 19933712 . + . ID=GSCOCG00020446001;Name=Cc11_g05060 | |
| 59533 chr11 manual_curation mRNA 19924684 19933712 . + . ID=GSCOCT00020446001;Parent=GSCOCG00020446001;Name=Cc11_g05060 | |
| 59534 chr11 manual_curation polypeptide 19925123 19932633 . + . ID=GSCOCP00020446001;Dbxref=InterPro:IPR000008,InterPro:IPR008973,InterPro:IPR018029,InterPro:IPR019411,PFAM:PF00168,PFAM:PF10296,PROFILE:PS50004,SMART:SM00239,SUPERFAMILY:SSF49562,SwissProt:Q03640,SwissProt:Q5RAG2,SwissProt:Q9BSJ8,TAIR:AT1G50260.1,TAIR:AT3G19830.1,TAIR:AT3G61050.1,TrEMBL:B9HY18,TrEMBL:D7TAD6,TrEMBL:I1LPK8;Derives_from=GSCOCT00020446001;Name=Cc11_g05060;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Calcium-dependent lipid-binding (CaLB domain) family protein,CC_functional_completeness:complete,CC_gene:ESYT1,CC_gene:TCB3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020446001~ Calcium-dependent lipid-binding (CaLB domain) family protein~ ESYT1~ complete;original_location=join(197913..198634%2C200155..200396%2C202296..202314%2C202426..202631%2C202833..202942%2C203071..203169%2C204773..205220%2C205335..205423);owner=coffea | |
| 59535 chr11 manual_curation exon 19924684 19925844 . + . Parent=GSCOCT00020446001 | |
| 59536 chr11 manual_curation exon 19927365 19927606 . + . Parent=GSCOCT00020446001 | |
| 59537 chr11 manual_curation exon 19929506 19929524 . + . Parent=GSCOCT00020446001 | |
| 59538 chr11 manual_curation exon 19929636 19929841 . + . Parent=GSCOCT00020446001 | |
| 59539 chr11 manual_curation exon 19930043 19930152 . + . Parent=GSCOCT00020446001 | |
| 59540 chr11 manual_curation exon 19930281 19930379 . + . Parent=GSCOCT00020446001 | |
| 59541 chr11 manual_curation exon 19931983 19932430 . + . Parent=GSCOCT00020446001 | |
| 59542 chr11 manual_curation exon 19932545 19933712 . + . Parent=GSCOCT00020446001 | |
| 59543 chr11 manual_curation CDS 19925123 19925844 . + 0 Parent=GSCOCT00020446001 | |
| 59544 chr11 manual_curation CDS 19927365 19927606 . + 2 Parent=GSCOCT00020446001 | |
| 59545 chr11 manual_curation CDS 19929506 19929524 . + 1 Parent=GSCOCT00020446001 | |
| 59546 chr11 manual_curation CDS 19929636 19929841 . + 2 Parent=GSCOCT00020446001 | |
| 59547 chr11 manual_curation CDS 19930043 19930152 . + 1 Parent=GSCOCT00020446001 | |
| 59548 chr11 manual_curation CDS 19930281 19930379 . + 0 Parent=GSCOCT00020446001 | |
| 59549 chr11 manual_curation CDS 19931983 19932430 . + 0 Parent=GSCOCT00020446001 | |
| 59550 chr11 manual_curation CDS 19932545 19932633 . + 1 Parent=GSCOCT00020446001 | |
| 59551 chr11 manual_curation gene 19935635 19938127 . + . ID=GSCOCG00020447001;Name=Cc11_g05070 | |
| 59552 chr11 manual_curation mRNA 19935635 19938127 . + . ID=GSCOCT00020447001;Parent=GSCOCG00020447001;Name=Cc11_g05070 | |
| 59553 chr11 manual_curation polypeptide 19935635 19938127 . + . ID=GSCOCP00020447001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q9CA58,SwissProt:Q9FMF6,SwissProt:Q9LFF1,TAIR:AT1G30290.1,TAIR:AT3G53700.1,TAIR:AT5G64320.1,TIGRFAMs:TIGR00756,TrEMBL:A5AZP8,TrEMBL:F6HLU2,TrEMBL:G7ILX9;Derives_from=GSCOCT00020447001;Name=Cc11_g05070;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Pentatricopeptide repeat-containing protein At3g53700%2C chloroplastic,CC_functional_completeness:modules,CC_gene:MEE40,CC_gene:At5g64320,CC_gene:At1g74580;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020447001~ Putative Pentatricopeptide repeat-containing protein At3g53700%2C chloroplastic~ MEE40~ modules;original_location=208425..210917;owner=coffea | |
| 59554 chr11 manual_curation exon 19935635 19938127 . + . Parent=GSCOCT00020447001 | |
| 59555 chr11 manual_curation CDS 19935635 19938127 . + 0 Parent=GSCOCT00020447001 | |
| 59556 chr11 manual_curation gene 19938324 19939743 . + . ID=GSCOCG00020448001;Name=Cc11_g05080 | |
| 59557 chr11 manual_curation mRNA 19938324 19939743 . + . ID=GSCOCT00020448001;Parent=GSCOCG00020448001;Name=Cc11_g05080 | |
| 59558 chr11 manual_curation polypeptide 19938324 19939339 . + . ID=GSCOCP00020448001;Derives_from=GSCOCT00020448001;Name=Cc11_g05080;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020448001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(211114..211176%2C211474..211593%2C211873..211942%2C212044..212129);owner=coffea | |
| 59559 chr11 manual_curation exon 19938324 19938386 . + . Parent=GSCOCT00020448001 | |
| 59560 chr11 manual_curation exon 19938684 19938803 . + . Parent=GSCOCT00020448001 | |
| 59561 chr11 manual_curation exon 19939083 19939152 . + . Parent=GSCOCT00020448001 | |
| 59562 chr11 manual_curation exon 19939254 19939743 . + . Parent=GSCOCT00020448001 | |
| 59563 chr11 manual_curation CDS 19938324 19938386 . + 0 Parent=GSCOCT00020448001 | |
| 59564 chr11 manual_curation CDS 19938684 19938803 . + 0 Parent=GSCOCT00020448001 | |
| 59565 chr11 manual_curation CDS 19939083 19939152 . + 0 Parent=GSCOCT00020448001 | |
| 59566 chr11 manual_curation CDS 19939254 19939339 . + 1 Parent=GSCOCT00020448001 | |
| 59567 chr11 manual_curation gene 19940181 19943239 . - . ID=GSCOCG00020449001;Name=Cc11_g05090 | |
| 59568 chr11 manual_curation mRNA 19940181 19943239 . - . ID=GSCOCT00020449001;Parent=GSCOCG00020449001;Name=Cc11_g05090 | |
| 59569 chr11 manual_curation polypeptide 19940387 19943207 . - . ID=GSCOCP00020449001;Dbxref=InterPro:IPR003772,PFAM:PF02620,TAIR:AT3G19800.1,TrEMBL:B3H4W6,TrEMBL:D7LA33,TrEMBL:Q9C5M1;Derives_from=GSCOCT00020449001;Name=Cc11_g05090;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF177),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020449001~ Protein of unknown function (DUF177)~ unknown_gene~ complete;original_location=complement(join(215890..215997%2C215227..215406%2C214333..214422%2C213785..213877%2C213633..213713%2C213470..213515%2C213177..213256));owner=coffea | |
| 59570 chr11 manual_curation exon 19940181 19940466 . - . Parent=GSCOCT00020449001 | |
| 59571 chr11 manual_curation exon 19940680 19940725 . - . Parent=GSCOCT00020449001 | |
| 59572 chr11 manual_curation exon 19940843 19940923 . - . Parent=GSCOCT00020449001 | |
| 59573 chr11 manual_curation exon 19940995 19941087 . - . Parent=GSCOCT00020449001 | |
| 59574 chr11 manual_curation exon 19941543 19941632 . - . Parent=GSCOCT00020449001 | |
| 59575 chr11 manual_curation exon 19942437 19942616 . - . Parent=GSCOCT00020449001 | |
| 59576 chr11 manual_curation exon 19943100 19943239 . - . Parent=GSCOCT00020449001 | |
| 59577 chr11 manual_curation CDS 19940387 19940466 . - 1 Parent=GSCOCT00020449001 | |
| 59578 chr11 manual_curation CDS 19940680 19940725 . - 0 Parent=GSCOCT00020449001 | |
| 59579 chr11 manual_curation CDS 19940843 19940923 . - 0 Parent=GSCOCT00020449001 | |
| 59580 chr11 manual_curation CDS 19940995 19941087 . - 0 Parent=GSCOCT00020449001 | |
| 59581 chr11 manual_curation CDS 19941543 19941632 . - 0 Parent=GSCOCT00020449001 | |
| 59582 chr11 manual_curation CDS 19942437 19942616 . - 0 Parent=GSCOCT00020449001 | |
| 59583 chr11 manual_curation CDS 19943100 19943207 . - 0 Parent=GSCOCT00020449001 | |
| 59584 chr11 manual_curation gene 19987295 19993332 . + . ID=GSCOCG00020450001;Name=Cc11_g05100 | |
| 59585 chr11 manual_curation mRNA 19987295 19993332 . + . ID=GSCOCT00020450001;Parent=GSCOCG00020450001;Name=Cc11_g05100 | |
| 59586 chr11 manual_curation polypeptide 19987395 19992953 . + . ID=GSCOCP00020450001;Dbxref=GENE3D:G3DSA:3.40.470.10,HAMAP:MF_00148,InterPro:IPR002043,InterPro:IPR005122,InterPro:IPR018085,PANTHER:PTHR11264,PFAM:PF03167,PROSITE:PS00130,SUPERFAMILY:SSF52141,SwissProt:A5W8H2,SwissProt:B0KV50,SwissProt:Q88N05,TAIR:AT3G18630.1,TIGRFAMs:TIGR00628,TrEMBL:D7L931,TrEMBL:D7TAC5,TrEMBL:I1LPL1;Derives_from=GSCOCT00020450001;Name=Cc11_g05100;Ontology_term=CC_evidence_code:ISS,GO:0004844,GO:0006281,GO:0006284,CC_EC_number:missing_EC_number,PRODUCT:Uracil-DNA glycosylase,CC_functional_completeness:modules,CC_gene:ung;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020450001~ Uracil-DNA glycosylase~ ung~ modules;original_location=join(260185..260500%2C261128..261348%2C261869..262027%2C262474..262504%2C262847..262982%2C264916..264999%2C265677..265743);owner=coffea | |
| 59587 chr11 manual_curation exon 19987295 19987710 . + . Parent=GSCOCT00020450001 | |
| 59588 chr11 manual_curation exon 19988338 19988558 . + . Parent=GSCOCT00020450001 | |
| 59589 chr11 manual_curation exon 19989079 19989237 . + . Parent=GSCOCT00020450001 | |
| 59590 chr11 manual_curation exon 19989684 19989714 . + . Parent=GSCOCT00020450001 | |
| 59591 chr11 manual_curation exon 19990057 19990192 . + . Parent=GSCOCT00020450001 | |
| 59592 chr11 manual_curation exon 19992126 19992209 . + . Parent=GSCOCT00020450001 | |
| 59593 chr11 manual_curation exon 19992887 19993332 . + . Parent=GSCOCT00020450001 | |
| 59594 chr11 manual_curation CDS 19987395 19987710 . + 0 Parent=GSCOCT00020450001 | |
| 59595 chr11 manual_curation CDS 19988338 19988558 . + 1 Parent=GSCOCT00020450001 | |
| 59596 chr11 manual_curation CDS 19989079 19989237 . + 0 Parent=GSCOCT00020450001 | |
| 59597 chr11 manual_curation CDS 19989684 19989714 . + 0 Parent=GSCOCT00020450001 | |
| 59598 chr11 manual_curation CDS 19990057 19990192 . + 1 Parent=GSCOCT00020450001 | |
| 59599 chr11 manual_curation CDS 19992126 19992209 . + 2 Parent=GSCOCT00020450001 | |
| 59600 chr11 manual_curation CDS 19992887 19992953 . + 2 Parent=GSCOCT00020450001 | |
| 59601 chr11 manual_curation gene 19995194 20003799 . + . ID=GSCOCG00020451001;Name=Cc11_g05110 | |
| 59602 chr11 manual_curation mRNA 19995194 20003799 . + . ID=GSCOCT00020451001;Parent=GSCOCG00020451001;Name=Cc11_g05110 | |
| 59603 chr11 manual_curation polypeptide 19995194 20003799 . + . ID=GSCOCP00020451001;Dbxref=InterPro:IPR000719,InterPro:IPR000858,InterPro:IPR001245,InterPro:IPR001480,InterPro:IPR002290,InterPro:IPR003609,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR013227,InterPro:IPR020635,PFAM:PF00954,PFAM:PF01453,PFAM:PF07714,PFAM:PF08276,PROFILE:PS50011,PROFILE:PS50927,PROFILE:PS50948,PROSITE:PS00108,SMART:SM00108,SMART:SM00219,SMART:SM00220,SMART:SM00473,SUPERFAMILY:SSF51110,SUPERFAMILY:SSF56112,SwissProt:O81832,SwissProt:O81905,SwissProt:Q09092,TAIR:AT1G65800.1,TAIR:AT4G21380.1,TAIR:AT4G27290.1,TrEMBL:B9N548,TrEMBL:F6H2A8,TrEMBL:F6H2G7;Derives_from=GSCOCT00020451001;Name=Cc11_g05110;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0005529,GO:0006468,GO:0048544,CC_EC_number:2.7.11.25,PRODUCT:G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290,CC_functional_completeness:modules,CC_gene:At4g27290,CC_gene:SD18,CC_gene:SRK6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020451001~ G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290~ At4g27290~ modules;original_location=join(267984..269256%2C269765..269899%2C270082..270239%2C270878..271085%2C271423..271660%2C271744..271894%2C271990..272300%2C274485..274586%2C275353..275491%2C275670..275742%2C276220..276333%2C276411..276589);owner=coffea | |
| 59604 chr11 manual_curation exon 19995194 19996466 . + . Parent=GSCOCT00020451001 | |
| 59605 chr11 manual_curation exon 19996975 19997109 . + . Parent=GSCOCT00020451001 | |
| 59606 chr11 manual_curation exon 19997292 19997449 . + . Parent=GSCOCT00020451001 | |
| 59607 chr11 manual_curation exon 19998088 19998295 . + . Parent=GSCOCT00020451001 | |
| 59608 chr11 manual_curation exon 19998633 19998870 . + . Parent=GSCOCT00020451001 | |
| 59609 chr11 manual_curation exon 19998954 19999104 . + . Parent=GSCOCT00020451001 | |
| 59610 chr11 manual_curation exon 19999200 19999510 . + . Parent=GSCOCT00020451001 | |
| 59611 chr11 manual_curation exon 20001695 20001796 . + . Parent=GSCOCT00020451001 | |
| 59612 chr11 manual_curation exon 20002563 20002701 . + . Parent=GSCOCT00020451001 | |
| 59613 chr11 manual_curation exon 20002880 20002952 . + . Parent=GSCOCT00020451001 | |
| 59614 chr11 manual_curation exon 20003430 20003543 . + . Parent=GSCOCT00020451001 | |
| 59615 chr11 manual_curation exon 20003621 20003799 . + . Parent=GSCOCT00020451001 | |
| 59616 chr11 manual_curation CDS 19995194 19996466 . + 0 Parent=GSCOCT00020451001 | |
| 59617 chr11 manual_curation CDS 19996975 19997109 . + 1 Parent=GSCOCT00020451001 | |
| 59618 chr11 manual_curation CDS 19997292 19997449 . + 1 Parent=GSCOCT00020451001 | |
| 59619 chr11 manual_curation CDS 19998088 19998295 . + 0 Parent=GSCOCT00020451001 | |
| 59620 chr11 manual_curation CDS 19998633 19998870 . + 1 Parent=GSCOCT00020451001 | |
| 59621 chr11 manual_curation CDS 19998954 19999104 . + 2 Parent=GSCOCT00020451001 | |
| 59622 chr11 manual_curation CDS 19999200 19999510 . + 0 Parent=GSCOCT00020451001 | |
| 59623 chr11 manual_curation CDS 20001695 20001796 . + 2 Parent=GSCOCT00020451001 | |
| 59624 chr11 manual_curation CDS 20002563 20002701 . + 2 Parent=GSCOCT00020451001 | |
| 59625 chr11 manual_curation CDS 20002880 20002952 . + 0 Parent=GSCOCT00020451001 | |
| 59626 chr11 manual_curation CDS 20003430 20003543 . + 1 Parent=GSCOCT00020451001 | |
| 59627 chr11 manual_curation CDS 20003621 20003799 . + 1 Parent=GSCOCT00020451001 | |
| 59628 chr11 manual_curation gene 20003864 20013026 . + . ID=GSCOCG00020452001;Name=Cc11_g05120 | |
| 59629 chr11 manual_curation mRNA 20003864 20013026 . + . ID=GSCOCT00020452001;Parent=GSCOCG00020452001;Name=Cc11_g05120 | |
| 59630 chr11 manual_curation polypeptide 20003864 20012880 . + . ID=GSCOCP00020452001;Dbxref=InterPro:IPR000719,InterPro:IPR000858,InterPro:IPR001245,InterPro:IPR001480,InterPro:IPR002290,InterPro:IPR003609,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR013227,InterPro:IPR020635,PFAM:PF00954,PFAM:PF01453,PFAM:PF07714,PFAM:PF08276,PROFILE:PS50011,PROFILE:PS50927,PROFILE:PS50948,PROSITE:PS00108,SMART:SM00108,SMART:SM00219,SMART:SM00220,SMART:SM00473,SUPERFAMILY:SSF51110,SUPERFAMILY:SSF56112,SwissProt:O81832,SwissProt:O81905,SwissProt:Q09092,TAIR:AT1G65800.1,TAIR:AT4G21380.1,TAIR:AT4G27290.1,TrEMBL:A5BKZ4,TrEMBL:B9N548,TrEMBL:F6H2G7;Derives_from=GSCOCT00020452001;Name=Cc11_g05120;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0005529,GO:0006468,GO:0048544,CC_EC_number:2.7.11.25,PRODUCT:G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290,CC_functional_completeness:complete,CC_gene:At4g27290,CC_gene:SD18,CC_gene:SRK6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020452001~ G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290~ At4g27290~ complete;original_location=join(276654..276700%2C278199..278363%2C278612..278776%2C279330..279354%2C281327..282611%2C283364..283507%2C283611..283768%2C284276..284486%2C284794..285031%2C285108..285258%2C285359..285670);owner=coffea | |
| 59631 chr11 manual_curation exon 20003864 20003910 . + . Parent=GSCOCT00020452001 | |
| 59632 chr11 manual_curation exon 20005409 20005573 . + . Parent=GSCOCT00020452001 | |
| 59633 chr11 manual_curation exon 20005822 20005986 . + . Parent=GSCOCT00020452001 | |
| 59634 chr11 manual_curation exon 20006540 20006564 . + . Parent=GSCOCT00020452001 | |
| 59635 chr11 manual_curation exon 20008537 20009821 . + . Parent=GSCOCT00020452001 | |
| 59636 chr11 manual_curation exon 20010574 20010717 . + . Parent=GSCOCT00020452001 | |
| 59637 chr11 manual_curation exon 20010821 20010978 . + . Parent=GSCOCT00020452001 | |
| 59638 chr11 manual_curation exon 20011486 20011696 . + . Parent=GSCOCT00020452001 | |
| 59639 chr11 manual_curation exon 20012004 20012241 . + . Parent=GSCOCT00020452001 | |
| 59640 chr11 manual_curation exon 20012318 20012468 . + . Parent=GSCOCT00020452001 | |
| 59641 chr11 manual_curation exon 20012569 20013026 . + . Parent=GSCOCT00020452001 | |
| 59642 chr11 manual_curation CDS 20003864 20003910 . + 0 Parent=GSCOCT00020452001 | |
| 59643 chr11 manual_curation CDS 20005409 20005573 . + 2 Parent=GSCOCT00020452001 | |
| 59644 chr11 manual_curation CDS 20005822 20005986 . + 2 Parent=GSCOCT00020452001 | |
| 59645 chr11 manual_curation CDS 20006540 20006564 . + 2 Parent=GSCOCT00020452001 | |
| 59646 chr11 manual_curation CDS 20008537 20009821 . + 0 Parent=GSCOCT00020452001 | |
| 59647 chr11 manual_curation CDS 20010574 20010717 . + 1 Parent=GSCOCT00020452001 | |
| 59648 chr11 manual_curation CDS 20010821 20010978 . + 1 Parent=GSCOCT00020452001 | |
| 59649 chr11 manual_curation CDS 20011486 20011696 . + 0 Parent=GSCOCT00020452001 | |
| 59650 chr11 manual_curation CDS 20012004 20012241 . + 1 Parent=GSCOCT00020452001 | |
| 59651 chr11 manual_curation CDS 20012318 20012468 . + 2 Parent=GSCOCT00020452001 | |
| 59652 chr11 manual_curation CDS 20012569 20012880 . + 0 Parent=GSCOCT00020452001 | |
| 59653 chr11 manual_curation gene 20030067 20030478 . + . ID=GSCOCG00020453001;Name=Cc11_g05130 | |
| 59654 chr11 manual_curation mRNA 20030067 20030478 . + . ID=GSCOCT00020453001;Parent=GSCOCG00020453001;Name=Cc11_g05130 | |
| 59655 chr11 manual_curation polypeptide 20030067 20030478 . + . ID=GSCOCP00020453001;Dbxref=GENE3D:G3DSA:1.10.20.10,InterPro:IPR007125,InterPro:IPR009072,PFAM:PF00125,SUPERFAMILY:SSF47113;Derives_from=GSCOCT00020453001;Name=Cc11_g05130;Ontology_term=CC_evidence_code:ISS,GO:0003677,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020453001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(302857..302995%2C303192..303268);owner=coffea | |
| 59656 chr11 manual_curation exon 20030067 20030205 . + . Parent=GSCOCT00020453001 | |
| 59657 chr11 manual_curation exon 20030402 20030478 . + . Parent=GSCOCT00020453001 | |
| 59658 chr11 manual_curation CDS 20030067 20030205 . + 0 Parent=GSCOCT00020453001 | |
| 59659 chr11 manual_curation CDS 20030402 20030478 . + 1 Parent=GSCOCT00020453001 | |
| 59660 chr11 manual_curation gene 20062006 20062988 . - . ID=GSCOCG00020455001;Name=Cc11_g05140 | |
| 59661 chr11 manual_curation mRNA 20062006 20062988 . - . ID=GSCOCT00020455001;Parent=GSCOCG00020455001;Name=Cc11_g05140 | |
| 59662 chr11 manual_curation polypeptide 20062006 20062988 . - . ID=GSCOCP00020455001;Dbxref=InterPro:IPR001611,PFAM:PF00560,SwissProt:O22476,SwissProt:Q8GUQ5,SwissProt:Q8L899,TAIR:AT2G01950.1,TAIR:AT3G13380.1,TAIR:AT4G39400.1,TrEMBL:A4LAP5,TrEMBL:A4LAP7,TrEMBL:A6N8J1;Derives_from=GSCOCT00020455001;Name=Cc11_g05140;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Systemin receptor SR160,CC_functional_completeness:fragment,CC_gene:CURL3,CC_gene:BRI1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020455001~ Systemin receptor SR160~ CURL3~ fragment;original_location=complement(join(335721..335778%2C335005..335447%2C334796..334939));owner=coffea | |
| 59663 chr11 manual_curation exon 20062006 20062149 . - . Parent=GSCOCT00020455001 | |
| 59664 chr11 manual_curation exon 20062215 20062657 . - . Parent=GSCOCT00020455001 | |
| 59665 chr11 manual_curation exon 20062931 20062988 . - . Parent=GSCOCT00020455001 | |
| 59666 chr11 manual_curation CDS 20062006 20062149 . - 0 Parent=GSCOCT00020455001 | |
| 59667 chr11 manual_curation CDS 20062215 20062657 . - 1 Parent=GSCOCT00020455001 | |
| 59668 chr11 manual_curation CDS 20062931 20062988 . - 0 Parent=GSCOCT00020455001 | |
| 59669 chr11 manual_curation gene 20067349 20071960 . + . ID=GSCOCG00020456001;Name=Cc11_g05150 | |
| 59670 chr11 manual_curation mRNA 20067349 20071960 . + . ID=GSCOCT00020456001;Parent=GSCOCG00020456001;Name=Cc11_g05150 | |
| 59671 chr11 manual_curation polypeptide 20067864 20071549 . + . ID=GSCOCP00020456001;Dbxref=InterPro:IPR000719,InterPro:IPR000858,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR003609,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR013227,InterPro:IPR020635,PFAM:PF00954,PFAM:PF07714,PFAM:PF08276,PROFILE:PS50011,PROFILE:PS50948,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SMART:SM00473,SUPERFAMILY:SSF56112,SwissProt:O81832,SwissProt:O81833,SwissProt:O81905,TAIR:AT4G21380.1,TAIR:AT4G27290.1,TAIR:AT4G27300.1,TrEMBL:B9N548,TrEMBL:D7RJY6,TrEMBL:F6H2G7;Derives_from=GSCOCT00020456001;Name=Cc11_g05150;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,GO:0048544,CC_EC_number:2.7.11.25,PRODUCT:G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290,CC_functional_completeness:fragment,CC_gene:At4g27290,CC_gene:SD18,CC_gene:SD11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020456001~ G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290~ At4g27290~ fragment;original_location=join(340654..341452%2C342143..342286%2C342390..342547%2C342961..343171%2C343488..343725%2C343801..343951%2C344046..344339);owner=coffea | |
| 59672 chr11 manual_curation exon 20067349 20068662 . + . Parent=GSCOCT00020456001 | |
| 59673 chr11 manual_curation exon 20069353 20069496 . + . Parent=GSCOCT00020456001 | |
| 59674 chr11 manual_curation exon 20069600 20069757 . + . Parent=GSCOCT00020456001 | |
| 59675 chr11 manual_curation exon 20070171 20070381 . + . Parent=GSCOCT00020456001 | |
| 59676 chr11 manual_curation exon 20070698 20070935 . + . Parent=GSCOCT00020456001 | |
| 59677 chr11 manual_curation exon 20071011 20071161 . + . Parent=GSCOCT00020456001 | |
| 59678 chr11 manual_curation exon 20071256 20071960 . + . Parent=GSCOCT00020456001 | |
| 59679 chr11 manual_curation CDS 20067864 20068662 . + 0 Parent=GSCOCT00020456001 | |
| 59680 chr11 manual_curation CDS 20069353 20069496 . + 1 Parent=GSCOCT00020456001 | |
| 59681 chr11 manual_curation CDS 20069600 20069757 . + 1 Parent=GSCOCT00020456001 | |
| 59682 chr11 manual_curation CDS 20070171 20070381 . + 0 Parent=GSCOCT00020456001 | |
| 59683 chr11 manual_curation CDS 20070698 20070935 . + 1 Parent=GSCOCT00020456001 | |
| 59684 chr11 manual_curation CDS 20071011 20071161 . + 2 Parent=GSCOCT00020456001 | |
| 59685 chr11 manual_curation CDS 20071256 20071549 . + 0 Parent=GSCOCT00020456001 | |
| 59686 chr11 manual_curation gene 20072116 20079610 . + . ID=GSCOCG00020457001;Name=Cc11_g05160 | |
| 59687 chr11 manual_curation mRNA 20072116 20079610 . + . ID=GSCOCT00020457001;Parent=GSCOCG00020457001;Name=Cc11_g05160 | |
| 59688 chr11 manual_curation polypeptide 20072116 20079490 . + . ID=GSCOCP00020457001;Dbxref=InterPro:IPR000719,InterPro:IPR000858,InterPro:IPR001245,InterPro:IPR001480,InterPro:IPR002290,InterPro:IPR003609,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR013227,InterPro:IPR020635,InterPro:IPR021820,PFAM:PF00954,PFAM:PF01453,PFAM:PF07714,PFAM:PF08276,PFAM:PF11883,PROFILE:PS50011,PROFILE:PS50927,PROFILE:PS50948,PROSITE:PS00108,SMART:SM00108,SMART:SM00219,SMART:SM00220,SMART:SM00473,SUPERFAMILY:SSF51110,SUPERFAMILY:SSF56112,SwissProt:O81832,SwissProt:O81905,SwissProt:Q9S972,TAIR:AT1G65800.1,TAIR:AT4G21380.1,TAIR:AT4G27290.1,TrEMBL:B9N548,TrEMBL:F6H2A5,TrEMBL:F6H2G7;Derives_from=GSCOCT00020457001;Name=Cc11_g05160;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0005529,GO:0006468,GO:0048544,CC_EC_number:2.7.11.25,PRODUCT:G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290,CC_functional_completeness:modules,CC_gene:At4g27290,CC_gene:SD18,CC_gene:SD16;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020457001~ G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290~ At4g27290~ modules;original_location=join(344906..344960%2C345383..345545%2C345788..345833%2C345873..346069%2C346453..346562%2C346794..346985%2C347529..347599%2C348028..348185%2C348433..349541%2C349980..350126%2C350306..350463%2C350863..351073%2C351407..351641%2C351722..351872%2C351969..352280);owner=coffea | |
| 59689 chr11 manual_curation exon 20072116 20072170 . + . Parent=GSCOCT00020457001 | |
| 59690 chr11 manual_curation exon 20072593 20072755 . + . Parent=GSCOCT00020457001 | |
| 59691 chr11 manual_curation exon 20072998 20073043 . + . Parent=GSCOCT00020457001 | |
| 59692 chr11 manual_curation exon 20073083 20073279 . + . Parent=GSCOCT00020457001 | |
| 59693 chr11 manual_curation exon 20073663 20073772 . + . Parent=GSCOCT00020457001 | |
| 59694 chr11 manual_curation exon 20074004 20074195 . + . Parent=GSCOCT00020457001 | |
| 59695 chr11 manual_curation exon 20074739 20074809 . + . Parent=GSCOCT00020457001 | |
| 59696 chr11 manual_curation exon 20075238 20075395 . + . Parent=GSCOCT00020457001 | |
| 59697 chr11 manual_curation exon 20075643 20076751 . + . Parent=GSCOCT00020457001 | |
| 59698 chr11 manual_curation exon 20077190 20077336 . + . Parent=GSCOCT00020457001 | |
| 59699 chr11 manual_curation exon 20077516 20077673 . + . Parent=GSCOCT00020457001 | |
| 59700 chr11 manual_curation exon 20078073 20078283 . + . Parent=GSCOCT00020457001 | |
| 59701 chr11 manual_curation exon 20078617 20078851 . + . Parent=GSCOCT00020457001 | |
| 59702 chr11 manual_curation exon 20078932 20079082 . + . Parent=GSCOCT00020457001 | |
| 59703 chr11 manual_curation exon 20079179 20079610 . + . Parent=GSCOCT00020457001 | |
| 59704 chr11 manual_curation CDS 20072116 20072170 . + 0 Parent=GSCOCT00020457001 | |
| 59705 chr11 manual_curation CDS 20072593 20072755 . + 1 Parent=GSCOCT00020457001 | |
| 59706 chr11 manual_curation CDS 20072998 20073043 . + 2 Parent=GSCOCT00020457001 | |
| 59707 chr11 manual_curation CDS 20073083 20073279 . + 0 Parent=GSCOCT00020457001 | |
| 59708 chr11 manual_curation CDS 20073663 20073772 . + 2 Parent=GSCOCT00020457001 | |
| 59709 chr11 manual_curation CDS 20074004 20074195 . + 1 Parent=GSCOCT00020457001 | |
| 59710 chr11 manual_curation CDS 20074739 20074809 . + 1 Parent=GSCOCT00020457001 | |
| 59711 chr11 manual_curation CDS 20075238 20075395 . + 0 Parent=GSCOCT00020457001 | |
| 59712 chr11 manual_curation CDS 20075643 20076751 . + 2 Parent=GSCOCT00020457001 | |
| 59713 chr11 manual_curation CDS 20077190 20077336 . + 1 Parent=GSCOCT00020457001 | |
| 59714 chr11 manual_curation CDS 20077516 20077673 . + 1 Parent=GSCOCT00020457001 | |
| 59715 chr11 manual_curation CDS 20078073 20078283 . + 0 Parent=GSCOCT00020457001 | |
| 59716 chr11 manual_curation CDS 20078617 20078851 . + 1 Parent=GSCOCT00020457001 | |
| 59717 chr11 manual_curation CDS 20078932 20079082 . + 2 Parent=GSCOCT00020457001 | |
| 59718 chr11 manual_curation CDS 20079179 20079490 . + 0 Parent=GSCOCT00020457001 | |
| 59719 chr11 manual_curation gene 20083945 20087376 . + . ID=GSCOCG00020458001;Name=Cc11_g05170 | |
| 59720 chr11 manual_curation mRNA 20083945 20087376 . + . ID=GSCOCT00020458001;Parent=GSCOCG00020458001;Name=Cc11_g05170 | |
| 59721 chr11 manual_curation polypeptide 20083945 20086521 . + . ID=GSCOCP00020458001;Dbxref=InterPro:IPR004403,InterPro:IPR005140,InterPro:IPR005141,InterPro:IPR005142,PANTHER:PTHR10113,PFAM:PF03463,PFAM:PF03464,PFAM:PF03465,SwissProt:P35614,SwissProt:Q39097,SwissProt:Q9LPV8,TAIR:AT1G12920.1,TAIR:AT3G26618.1,TAIR:AT5G47880.1,TIGRFAMs:TIGR03676,TrEMBL:F6H1H5,TrEMBL:F6I3Y5,TrEMBL:I1L3W8;Derives_from=GSCOCT00020458001;Name=Cc11_g05170;Ontology_term=CC_evidence_code:ISS,GO:0005737,GO:0006415,CC_EC_number:missing_EC_number,PRODUCT:Eukaryotic peptide chain release factor subunit 1-3,CC_functional_completeness:complete,CC_gene:ERF1-3,CC_gene:ERF1-2,CC_gene:ERF1-1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020458001~ Eukaryotic peptide chain release factor subunit 1-3~ ERF1-3~ complete;original_location=join(356735..356783%2C356950..357028%2C357979..358981%2C359102..359311);owner=coffea | |
| 59722 chr11 manual_curation exon 20083945 20083993 . + . Parent=GSCOCT00020458001 | |
| 59723 chr11 manual_curation exon 20084160 20084238 . + . Parent=GSCOCT00020458001 | |
| 59724 chr11 manual_curation exon 20085189 20086191 . + . Parent=GSCOCT00020458001 | |
| 59725 chr11 manual_curation exon 20086312 20087376 . + . Parent=GSCOCT00020458001 | |
| 59726 chr11 manual_curation CDS 20083945 20083993 . + 0 Parent=GSCOCT00020458001 | |
| 59727 chr11 manual_curation CDS 20084160 20084238 . + 1 Parent=GSCOCT00020458001 | |
| 59728 chr11 manual_curation CDS 20085189 20086191 . + 2 Parent=GSCOCT00020458001 | |
| 59729 chr11 manual_curation CDS 20086312 20086521 . + 0 Parent=GSCOCT00020458001 | |
| 59730 chr11 manual_curation gene 20089111 20096244 . - . ID=GSCOCG00020459001;Name=Cc11_g05180 | |
| 59731 chr11 manual_curation mRNA 20089111 20096244 . - . ID=GSCOCT00020459001;Parent=GSCOCG00020459001;Name=Cc11_g05180 | |
| 59732 chr11 manual_curation polypeptide 20089504 20096150 . - . ID=GSCOCP00020459001;Dbxref=InterPro:IPR000109,InterPro:IPR016196,InterPro:IPR018456,PFAM:PF00854,PROSITE:PS01022,PROSITE:PS01023,SUPERFAMILY:SSF103473,SwissProt:P46032,SwissProt:Q93Z20,SwissProt:Q9LFB8,TAIR:AT1G62200.1,TAIR:AT2G02040.1,TAIR:AT5G01180.1,TrEMBL:B9HVP7,TrEMBL:F6HEU1,TrEMBL:Q9ZTX4;Derives_from=GSCOCT00020459001;Name=Cc11_g05180;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006857,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Peptide transporter PTR2,CC_functional_completeness:complete,CC_gene:PTR2,CC_gene:At1g62200,CC_gene:PTR5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020459001~ Peptide transporter PTR2~ PTR2~ complete;original_location=complement(join(368919..368940%2C367427..367596%2C365555..365660%2C365256..365473%2C363812..364368%2C362294..363116));owner=coffea | |
| 59733 chr11 manual_curation exon 20089111 20090326 . - . Parent=GSCOCT00020459001 | |
| 59734 chr11 manual_curation exon 20091022 20091578 . - . Parent=GSCOCT00020459001 | |
| 59735 chr11 manual_curation exon 20092466 20092683 . - . Parent=GSCOCT00020459001 | |
| 59736 chr11 manual_curation exon 20092765 20092870 . - . Parent=GSCOCT00020459001 | |
| 59737 chr11 manual_curation exon 20094637 20094806 . - . Parent=GSCOCT00020459001 | |
| 59738 chr11 manual_curation exon 20096129 20096244 . - . Parent=GSCOCT00020459001 | |
| 59739 chr11 manual_curation CDS 20089504 20090326 . - 2 Parent=GSCOCT00020459001 | |
| 59740 chr11 manual_curation CDS 20091022 20091578 . - 0 Parent=GSCOCT00020459001 | |
| 59741 chr11 manual_curation CDS 20092466 20092683 . - 1 Parent=GSCOCT00020459001 | |
| 59742 chr11 manual_curation CDS 20092765 20092870 . - 0 Parent=GSCOCT00020459001 | |
| 59743 chr11 manual_curation CDS 20094637 20094806 . - 1 Parent=GSCOCT00020459001 | |
| 59744 chr11 manual_curation CDS 20096129 20096150 . - 0 Parent=GSCOCT00020459001 | |
| 59745 chr11 manual_curation gene 20100922 20104976 . + . ID=GSCOCG00020460001;Name=Cc11_g05190 | |
| 59746 chr11 manual_curation mRNA 20100922 20104976 . + . ID=GSCOCT00020460001;Parent=GSCOCG00020460001;Name=Cc11_g05190 | |
| 59747 chr11 manual_curation polypeptide 20100995 20104838 . + . ID=GSCOCP00020460001;Dbxref=GENE3D:G3DSA:3.40.640.10,InterPro:IPR002129,InterPro:IPR010107,InterPro:IPR015421,InterPro:IPR015424,PANTHER:PTHR11999,PANTHER:PTHR11999:SF1,PFAM:PF00282,SUPERFAMILY:SSF53383,SwissProt:P54767,SwissProt:Q07346,SwissProt:Q42521,TAIR:AT1G65960.2,TAIR:AT2G02010.1,TAIR:AT5G17330.1,TIGRFAMs:TIGR01788,TrEMBL:F6HF89,TrEMBL:Q01J81,TrEMBL:Q7XV18;Derives_from=GSCOCT00020460001;Name=Cc11_g05190;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004351,GO:0006536,GO:0016831,GO:0019752,GO:0030170,CC_EC_number:4.1.1.15,CC_EC_number:4.1.1.15,PRODUCT:Glutamate decarboxylase,CC_functional_completeness:complete,CC_gene:GAD,CC_gene:GAD1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020460001~ Glutamate decarboxylase~ GAD~ complete;original_location=join(373785..373879%2C374178..374382%2C374909..375109%2C375450..375664%2C375774..376027%2C376378..376430%2C377107..377628);owner=coffea | |
| 59748 chr11 manual_curation exon 20100922 20101089 . + . Parent=GSCOCT00020460001 | |
| 59749 chr11 manual_curation exon 20101388 20101592 . + . Parent=GSCOCT00020460001 | |
| 59750 chr11 manual_curation exon 20102119 20102319 . + . Parent=GSCOCT00020460001 | |
| 59751 chr11 manual_curation exon 20102660 20102874 . + . Parent=GSCOCT00020460001 | |
| 59752 chr11 manual_curation exon 20102984 20103237 . + . Parent=GSCOCT00020460001 | |
| 59753 chr11 manual_curation exon 20103588 20103640 . + . Parent=GSCOCT00020460001 | |
| 59754 chr11 manual_curation exon 20104317 20104976 . + . Parent=GSCOCT00020460001 | |
| 59755 chr11 manual_curation CDS 20100995 20101089 . + 0 Parent=GSCOCT00020460001 | |
| 59756 chr11 manual_curation CDS 20101388 20101592 . + 2 Parent=GSCOCT00020460001 | |
| 59757 chr11 manual_curation CDS 20102119 20102319 . + 0 Parent=GSCOCT00020460001 | |
| 59758 chr11 manual_curation CDS 20102660 20102874 . + 0 Parent=GSCOCT00020460001 | |
| 59759 chr11 manual_curation CDS 20102984 20103237 . + 2 Parent=GSCOCT00020460001 | |
| 59760 chr11 manual_curation CDS 20103588 20103640 . + 1 Parent=GSCOCT00020460001 | |
| 59761 chr11 manual_curation CDS 20104317 20104838 . + 0 Parent=GSCOCT00020460001 | |
| 59762 chr11 manual_curation gene 20109478 20116812 . - . ID=GSCOCG00020461001;Name=Cc11_g05200 | |
| 59763 chr11 manual_curation mRNA 20109478 20116812 . - . ID=GSCOCT00020461001;Parent=GSCOCG00020461001;Name=Cc11_g05200 | |
| 59764 chr11 manual_curation polypeptide 20109854 20116740 . - . ID=GSCOCP00020461001;Dbxref=InterPro:IPR001948,PFAM:PF02127,PRINTS:PR00932,SwissProt:B9RAJ0,SwissProt:Q2HJH1,SwissProt:Q9ULA0,TAIR:AT5G04710.1,TAIR:AT5G60160.1,TrEMBL:B9I3N8,TrEMBL:B9IF79,TrEMBL:D7SGV2;Derives_from=GSCOCT00020461001;Name=Cc11_g05200;Ontology_term=CC_evidence_code:ISS,GO:0004177,GO:0005773,GO:0006508,GO:0008270,CC_EC_number:3.4.11.21,PRODUCT:Probable aspartyl aminopeptidase,CC_functional_completeness:complete,CC_gene:RCOM_1506700,CC_gene:DNPEP;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020461001~ Probable aspartyl aminopeptidase~ RCOM_1506700~ complete;original_location=complement(join(389461..389530%2C389121..389256%2C387414..387492%2C387092..387294%2C386903..386972%2C385585..385707%2C385272..385427%2C384430..384603%2C383551..383625%2C383328..383468%2C382644..382865));owner=coffea | |
| 59765 chr11 manual_curation exon 20109478 20110075 . - . Parent=GSCOCT00020461001 | |
| 59766 chr11 manual_curation exon 20110538 20110678 . - . Parent=GSCOCT00020461001 | |
| 59767 chr11 manual_curation exon 20110761 20110835 . - . Parent=GSCOCT00020461001 | |
| 59768 chr11 manual_curation exon 20111640 20111813 . - . Parent=GSCOCT00020461001 | |
| 59769 chr11 manual_curation exon 20112482 20112637 . - . Parent=GSCOCT00020461001 | |
| 59770 chr11 manual_curation exon 20112795 20112917 . - . Parent=GSCOCT00020461001 | |
| 59771 chr11 manual_curation exon 20114113 20114182 . - . Parent=GSCOCT00020461001 | |
| 59772 chr11 manual_curation exon 20114302 20114504 . - . Parent=GSCOCT00020461001 | |
| 59773 chr11 manual_curation exon 20114624 20114702 . - . Parent=GSCOCT00020461001 | |
| 59774 chr11 manual_curation exon 20116331 20116466 . - . Parent=GSCOCT00020461001 | |
| 59775 chr11 manual_curation exon 20116671 20116812 . - . Parent=GSCOCT00020461001 | |
| 59776 chr11 manual_curation CDS 20109854 20110075 . - 0 Parent=GSCOCT00020461001 | |
| 59777 chr11 manual_curation CDS 20110538 20110678 . - 0 Parent=GSCOCT00020461001 | |
| 59778 chr11 manual_curation CDS 20110761 20110835 . - 0 Parent=GSCOCT00020461001 | |
| 59779 chr11 manual_curation CDS 20111640 20111813 . - 0 Parent=GSCOCT00020461001 | |
| 59780 chr11 manual_curation CDS 20112482 20112637 . - 0 Parent=GSCOCT00020461001 | |
| 59781 chr11 manual_curation CDS 20112795 20112917 . - 0 Parent=GSCOCT00020461001 | |
| 59782 chr11 manual_curation CDS 20114113 20114182 . - 2 Parent=GSCOCT00020461001 | |
| 59783 chr11 manual_curation CDS 20114302 20114504 . - 0 Parent=GSCOCT00020461001 | |
| 59784 chr11 manual_curation CDS 20114624 20114702 . - 2 Parent=GSCOCT00020461001 | |
| 59785 chr11 manual_curation CDS 20116331 20116466 . - 1 Parent=GSCOCT00020461001 | |
| 59786 chr11 manual_curation CDS 20116671 20116740 . - 0 Parent=GSCOCT00020461001 | |
| 59787 chr11 manual_curation gene 20130315 20134287 . + . ID=GSCOCG00020462001;Name=Cc11_g05210 | |
| 59788 chr11 manual_curation mRNA 20130315 20134287 . + . ID=GSCOCT00020462001;Parent=GSCOCG00020462001;Name=Cc11_g05210 | |
| 59789 chr11 manual_curation polypeptide 20130412 20134001 . + . ID=GSCOCP00020462001;Dbxref=GENE3D:G3DSA:3.40.640.10,InterPro:IPR002129,InterPro:IPR010107,InterPro:IPR015421,InterPro:IPR015424,PANTHER:PTHR11999,PANTHER:PTHR11999:SF1,PFAM:PF00282,SUPERFAMILY:SSF53383,SwissProt:Q07346,SwissProt:Q42521,SwissProt:Q9ZPS3,TAIR:AT2G02000.1,TAIR:AT2G02010.1,TAIR:AT5G17330.1,TIGRFAMs:TIGR01788,TrEMBL:B9SR96,TrEMBL:F6HF90,TrEMBL:Q94KK8;Derives_from=GSCOCT00020462001;Name=Cc11_g05210;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004351,GO:0006536,GO:0016831,GO:0019752,GO:0030170,CC_EC_number:4.1.1.15,CC_EC_number:4.1.1.15,PRODUCT:Glutamate decarboxylase 4,CC_functional_completeness:complete,CC_gene:GAD4,CC_gene:GAD1,CC_gene:GAD;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020462001~ Glutamate decarboxylase 4~ GAD4~ complete;original_location=join(403202..403287%2C403581..403812%2C404533..404733%2C405393..405607%2C405726..405979%2C406085..406137%2C406312..406686%2C406720..406791);owner=coffea | |
| 59790 chr11 manual_curation exon 20130315 20130497 . + . Parent=GSCOCT00020462001 | |
| 59791 chr11 manual_curation exon 20130791 20131022 . + . Parent=GSCOCT00020462001 | |
| 59792 chr11 manual_curation exon 20131743 20131943 . + . Parent=GSCOCT00020462001 | |
| 59793 chr11 manual_curation exon 20132603 20132817 . + . Parent=GSCOCT00020462001 | |
| 59794 chr11 manual_curation exon 20132936 20133189 . + . Parent=GSCOCT00020462001 | |
| 59795 chr11 manual_curation exon 20133295 20133347 . + . Parent=GSCOCT00020462001 | |
| 59796 chr11 manual_curation exon 20133522 20133896 . + . Parent=GSCOCT00020462001 | |
| 59797 chr11 manual_curation exon 20133930 20134287 . + . Parent=GSCOCT00020462001 | |
| 59798 chr11 manual_curation CDS 20130412 20130497 . + 0 Parent=GSCOCT00020462001 | |
| 59799 chr11 manual_curation CDS 20130791 20131022 . + 2 Parent=GSCOCT00020462001 | |
| 59800 chr11 manual_curation CDS 20131743 20131943 . + 0 Parent=GSCOCT00020462001 | |
| 59801 chr11 manual_curation CDS 20132603 20132817 . + 0 Parent=GSCOCT00020462001 | |
| 59802 chr11 manual_curation CDS 20132936 20133189 . + 2 Parent=GSCOCT00020462001 | |
| 59803 chr11 manual_curation CDS 20133295 20133347 . + 1 Parent=GSCOCT00020462001 | |
| 59804 chr11 manual_curation CDS 20133522 20133896 . + 0 Parent=GSCOCT00020462001 | |
| 59805 chr11 manual_curation CDS 20133930 20134001 . + 0 Parent=GSCOCT00020462001 | |
| 59806 chr11 manual_curation gene 20138297 20139260 . + . ID=GSCOCG00020463001;Name=Cc11_g05220 | |
| 59807 chr11 manual_curation mRNA 20138297 20139260 . + . ID=GSCOCT00020463001;Parent=GSCOCG00020463001;Name=Cc11_g05220 | |
| 59808 chr11 manual_curation polypeptide 20138364 20138907 . + . ID=GSCOCP00020463001;Dbxref=InterPro:IPR003612,InterPro:IPR016140,PFAM:PF00234,SUPERFAMILY:SSF47699,TAIR:AT2G37870.1,TAIR:AT3G53980.1,TAIR:AT5G05960.1,TrEMBL:B9S7C4,TrEMBL:C6T0Z4,TrEMBL:I1KX00;Derives_from=GSCOCT00020463001;Name=Cc11_g05220;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020463001~ Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein~ unknown_gene~ complete;original_location=join(411154..411499%2C411681..411697);owner=coffea | |
| 59809 chr11 manual_curation exon 20138297 20138709 . + . Parent=GSCOCT00020463001 | |
| 59810 chr11 manual_curation exon 20138891 20139260 . + . Parent=GSCOCT00020463001 | |
| 59811 chr11 manual_curation CDS 20138364 20138709 . + 0 Parent=GSCOCT00020463001 | |
| 59812 chr11 manual_curation CDS 20138891 20138907 . + 1 Parent=GSCOCT00020463001 | |
| 59813 chr11 manual_curation gene 20156329 20158472 . + . ID=GSCOCG00020465001;Name=Cc11_g05230 | |
| 59814 chr11 manual_curation mRNA 20156329 20158472 . + . ID=GSCOCT00020465001;Parent=GSCOCG00020465001;Name=Cc11_g05230 | |
| 59815 chr11 manual_curation polypeptide 20156387 20158198 . + . ID=GSCOCP00020465001;Dbxref=TAIR:AT1G14630.1,TAIR:AT2G01990.1,TAIR:AT5G48720.2,TrEMBL:A5B1E5,TrEMBL:B9HVQ1,TrEMBL:D7T8D7;Derives_from=GSCOCT00020465001;Name=Cc11_g05230;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020465001~ Putative unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01990.1)%3B Has 125 Blast hits to 123 proteins in 14 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 125%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(429177..429276%2C429385..429554%2C429646..429733%2C429830..430009%2C430696..430988);owner=coffea | |
| 59816 chr11 manual_curation exon 20156329 20156486 . + . Parent=GSCOCT00020465001 | |
| 59817 chr11 manual_curation exon 20156595 20156764 . + . Parent=GSCOCT00020465001 | |
| 59818 chr11 manual_curation exon 20156856 20156943 . + . Parent=GSCOCT00020465001 | |
| 59819 chr11 manual_curation exon 20157040 20157219 . + . Parent=GSCOCT00020465001 | |
| 59820 chr11 manual_curation exon 20157906 20158472 . + . Parent=GSCOCT00020465001 | |
| 59821 chr11 manual_curation CDS 20156387 20156486 . + 0 Parent=GSCOCT00020465001 | |
| 59822 chr11 manual_curation CDS 20156595 20156764 . + 1 Parent=GSCOCT00020465001 | |
| 59823 chr11 manual_curation CDS 20156856 20156943 . + 0 Parent=GSCOCT00020465001 | |
| 59824 chr11 manual_curation CDS 20157040 20157219 . + 1 Parent=GSCOCT00020465001 | |
| 59825 chr11 manual_curation CDS 20157906 20158198 . + 1 Parent=GSCOCT00020465001 | |
| 59826 chr11 manual_curation gene 20182140 20189247 . + . ID=GSCOCG00020468001;Name=Cc11_g05240 | |
| 59827 chr11 manual_curation mRNA 20182140 20189247 . + . ID=GSCOCT00020468001;Parent=GSCOCG00020468001;Name=Cc11_g05240 | |
| 59828 chr11 manual_curation polypeptide 20182140 20189247 . + . ID=GSCOCP00020468001;Dbxref=InterPro:IPR003855,InterPro:IPR018519,PFAM:PF02705,SwissProt:Q67UC7,SwissProt:Q6YSA9,SwissProt:Q84YJ9,TAIR:AT2G30070.1,TAIR:AT4G13420.1,TAIR:AT5G14880.1,TIGRFAMs:TIGR00794,TrEMBL:B9HJL6,TrEMBL:B9HVQ2,TrEMBL:B9S7C7;Derives_from=GSCOCT00020468001;Name=Cc11_g05240;Ontology_term=CC_evidence_code:ISS,GO:0006813,GO:0015079,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Probable potassium transporter 17,CC_functional_completeness:complete,CC_gene:HAK17,CC_gene:HAK4,CC_gene:HAK26;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020468001~ Probable potassium transporter 17~ HAK17~ complete;original_location=join(454930..454953%2C456756..456966%2C458543..458761%2C458880..458930%2C459332..459568%2C460173..460264%2C460351..460720%2C461187..462037);owner=coffea | |
| 59829 chr11 manual_curation exon 20182140 20182163 . + . Parent=GSCOCT00020468001 | |
| 59830 chr11 manual_curation exon 20183966 20184176 . + . Parent=GSCOCT00020468001 | |
| 59831 chr11 manual_curation exon 20185753 20185971 . + . Parent=GSCOCT00020468001 | |
| 59832 chr11 manual_curation exon 20186090 20186140 . + . Parent=GSCOCT00020468001 | |
| 59833 chr11 manual_curation exon 20186542 20186778 . + . Parent=GSCOCT00020468001 | |
| 59834 chr11 manual_curation exon 20187383 20187474 . + . Parent=GSCOCT00020468001 | |
| 59835 chr11 manual_curation exon 20187561 20187930 . + . Parent=GSCOCT00020468001 | |
| 59836 chr11 manual_curation exon 20188397 20189247 . + . Parent=GSCOCT00020468001 | |
| 59837 chr11 manual_curation CDS 20182140 20182163 . + 0 Parent=GSCOCT00020468001 | |
| 59838 chr11 manual_curation CDS 20183966 20184176 . + 0 Parent=GSCOCT00020468001 | |
| 59839 chr11 manual_curation CDS 20185753 20185971 . + 1 Parent=GSCOCT00020468001 | |
| 59840 chr11 manual_curation CDS 20186090 20186140 . + 1 Parent=GSCOCT00020468001 | |
| 59841 chr11 manual_curation CDS 20186542 20186778 . + 1 Parent=GSCOCT00020468001 | |
| 59842 chr11 manual_curation CDS 20187383 20187474 . + 1 Parent=GSCOCT00020468001 | |
| 59843 chr11 manual_curation CDS 20187561 20187930 . + 0 Parent=GSCOCT00020468001 | |
| 59844 chr11 manual_curation CDS 20188397 20189247 . + 1 Parent=GSCOCT00020468001 | |
| 59845 chr11 manual_curation gene 20204831 20213527 . + . ID=GSCOCG00020469001;Name=Cc11_g05250 | |
| 59846 chr11 manual_curation mRNA 20204831 20213527 . + . ID=GSCOCT00020469001;Parent=GSCOCG00020469001;Name=Cc11_g05250 | |
| 59847 chr11 manual_curation polypeptide 20205086 20213229 . + . ID=GSCOCP00020469001;Dbxref=InterPro:IPR003855,InterPro:IPR018519,PFAM:PF02705,SwissProt:Q5JMH0,SwissProt:Q67UC7,SwissProt:Q6YSA9,TAIR:AT2G30070.1,TAIR:AT4G13420.1,TAIR:AT5G14880.1,TIGRFAMs:TIGR00794,TrEMBL:B9HJL6,TrEMBL:B9HVQ2,TrEMBL:B9S7C7;Derives_from=GSCOCT00020469001;Name=Cc11_g05250;Ontology_term=CC_evidence_code:ISS,GO:0006813,GO:0015079,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Probable potassium transporter 17,CC_functional_completeness:complete,CC_gene:HAK17,CC_gene:HAK4,CC_gene:HAK6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020469001~ Probable potassium transporter 17~ HAK17~ complete;original_location=join(477876..478052%2C480352..480574%2C482172..482390%2C482510..482560%2C483008..483268%2C483863..483915%2C484001..484370%2C485040..485884%2C485960..486019);owner=coffea | |
| 59848 chr11 manual_curation exon 20204831 20205262 . + . Parent=GSCOCT00020469001 | |
| 59849 chr11 manual_curation exon 20207562 20207784 . + . Parent=GSCOCT00020469001 | |
| 59850 chr11 manual_curation exon 20209382 20209600 . + . Parent=GSCOCT00020469001 | |
| 59851 chr11 manual_curation exon 20209720 20209770 . + . Parent=GSCOCT00020469001 | |
| 59852 chr11 manual_curation exon 20210218 20210478 . + . Parent=GSCOCT00020469001 | |
| 59853 chr11 manual_curation exon 20211073 20211125 . + . Parent=GSCOCT00020469001 | |
| 59854 chr11 manual_curation exon 20211211 20211580 . + . Parent=GSCOCT00020469001 | |
| 59855 chr11 manual_curation exon 20212250 20213094 . + . Parent=GSCOCT00020469001 | |
| 59856 chr11 manual_curation exon 20213170 20213527 . + . Parent=GSCOCT00020469001 | |
| 59857 chr11 manual_curation CDS 20205086 20205262 . + 0 Parent=GSCOCT00020469001 | |
| 59858 chr11 manual_curation CDS 20207562 20207784 . + 0 Parent=GSCOCT00020469001 | |
| 59859 chr11 manual_curation CDS 20209382 20209600 . + 1 Parent=GSCOCT00020469001 | |
| 59860 chr11 manual_curation CDS 20209720 20209770 . + 1 Parent=GSCOCT00020469001 | |
| 59861 chr11 manual_curation CDS 20210218 20210478 . + 1 Parent=GSCOCT00020469001 | |
| 59862 chr11 manual_curation CDS 20211073 20211125 . + 1 Parent=GSCOCT00020469001 | |
| 59863 chr11 manual_curation CDS 20211211 20211580 . + 0 Parent=GSCOCT00020469001 | |
| 59864 chr11 manual_curation CDS 20212250 20213094 . + 1 Parent=GSCOCT00020469001 | |
| 59865 chr11 manual_curation CDS 20213170 20213229 . + 0 Parent=GSCOCT00020469001 | |
| 59866 chr11 manual_curation gene 20219177 20236590 . - . ID=GSCOCG00020470001;Name=Cc11_g05260 | |
| 59867 chr11 manual_curation mRNA 20219177 20236590 . - . ID=GSCOCT00020470001;Parent=GSCOCG00020470001;Name=Cc11_g05260 | |
| 59868 chr11 manual_curation polypeptide 20219463 20236590 . - . ID=GSCOCP00020470001;Dbxref=GENE3D:G3DSA:2.60.120.10,InterPro:IPR000595,InterPro:IPR014710,InterPro:IPR018418,InterPro:IPR018422,InterPro:IPR018490,PANTHER:PTHR10110,PANTHER:PTHR10110:SF4,PFAM:PF00027,PROFILE:PS50042,SUPERFAMILY:SSF51206,SwissProt:Q3YL57,SwissProt:Q9LKW9,TAIR:AT1G14660.1,TAIR:AT2G01980.1,TAIR:AT2G28290.1,TrEMBL:D0V1M4,TrEMBL:D7T8E0,TrEMBL:Q4W3B5;Derives_from=GSCOCT00020470001;Name=Cc11_g05260;Ontology_term=CC_evidence_code:ISS,GO:0006812,GO:0015299,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:NHX7,CC_gene:NHX8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020470001~ Hypothetical protein~ NHX7~ missing_functional_completeness;original_location=complement(join(509163..509380%2C508962..509069%2C508475..508532%2C508131..508365%2C502942..503244%2C497931..498028%2C497503..497634%2C497204..497422%2C496886..497092%2C495730..495991%2C492854..493164%2C492253..492549));owner=coffea | |
| 59869 chr11 manual_curation exon 20219177 20219759 . - . Parent=GSCOCT00020470001 | |
| 59870 chr11 manual_curation exon 20220064 20220374 . - . Parent=GSCOCT00020470001 | |
| 59871 chr11 manual_curation exon 20222940 20223201 . - . Parent=GSCOCT00020470001 | |
| 59872 chr11 manual_curation exon 20224096 20224302 . - . Parent=GSCOCT00020470001 | |
| 59873 chr11 manual_curation exon 20224414 20224632 . - . Parent=GSCOCT00020470001 | |
| 59874 chr11 manual_curation exon 20224713 20224844 . - . Parent=GSCOCT00020470001 | |
| 59875 chr11 manual_curation exon 20225141 20225238 . - . Parent=GSCOCT00020470001 | |
| 59876 chr11 manual_curation exon 20230152 20230454 . - . Parent=GSCOCT00020470001 | |
| 59877 chr11 manual_curation exon 20235341 20235575 . - . Parent=GSCOCT00020470001 | |
| 59878 chr11 manual_curation exon 20235685 20235742 . - . Parent=GSCOCT00020470001 | |
| 59879 chr11 manual_curation exon 20236172 20236279 . - . Parent=GSCOCT00020470001 | |
| 59880 chr11 manual_curation exon 20236373 20236590 . - . Parent=GSCOCT00020470001 | |
| 59881 chr11 manual_curation CDS 20219463 20219759 . - 0 Parent=GSCOCT00020470001 | |
| 59882 chr11 manual_curation CDS 20220064 20220374 . - 1 Parent=GSCOCT00020470001 | |
| 59883 chr11 manual_curation CDS 20222940 20223201 . - 0 Parent=GSCOCT00020470001 | |
| 59884 chr11 manual_curation CDS 20224096 20224302 . - 0 Parent=GSCOCT00020470001 | |
| 59885 chr11 manual_curation CDS 20224414 20224632 . - 0 Parent=GSCOCT00020470001 | |
| 59886 chr11 manual_curation CDS 20224713 20224844 . - 0 Parent=GSCOCT00020470001 | |
| 59887 chr11 manual_curation CDS 20225141 20225238 . - 1 Parent=GSCOCT00020470001 | |
| 59888 chr11 manual_curation CDS 20230152 20230454 . - 1 Parent=GSCOCT00020470001 | |
| 59889 chr11 manual_curation CDS 20235341 20235575 . - 0 Parent=GSCOCT00020470001 | |
| 59890 chr11 manual_curation CDS 20235685 20235742 . - 2 Parent=GSCOCT00020470001 | |
| 59891 chr11 manual_curation CDS 20236172 20236279 . - 2 Parent=GSCOCT00020470001 | |
| 59892 chr11 manual_curation CDS 20236373 20236590 . - 0 Parent=GSCOCT00020470001 | |
| 59893 chr11 manual_curation gene 20237614 20245733 . - . ID=GSCOCG00020471001;Name=Cc11_g05270 | |
| 59894 chr11 manual_curation mRNA 20237614 20245733 . - . ID=GSCOCT00020471001;Parent=GSCOCG00020471001;Name=Cc11_g05270 | |
| 59895 chr11 manual_curation polypeptide 20237614 20245733 . - . ID=GSCOCP00020471001;Dbxref=InterPro:IPR006153,InterPro:IPR018418,InterPro:IPR018422,PANTHER:PTHR10110,PANTHER:PTHR10110:SF4,PFAM:PF00999,SwissProt:P48763,SwissProt:Q3YL57,SwissProt:Q9LKW9,TAIR:AT1G14660.1,TAIR:AT1G79610.1,TAIR:AT2G01980.1,TrEMBL:G5EM36,TrEMBL:H9DVC6,TrEMBL:Q4W3B5;Derives_from=GSCOCT00020471001;Name=Cc11_g05270;Ontology_term=CC_evidence_code:ISS,GO:0006812,GO:0015299,GO:0016021,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Sodium/hydrogen exchanger 7,CC_functional_completeness:fragment,CC_gene:NHX7,CC_gene:NHX8,CC_gene:Slc9a2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020471001~ Sodium/hydrogen exchanger 7~ NHX7~ fragment;original_location=complement(join(518461..518523%2C518232..518389%2C517918..518019%2C517726..517843%2C516838..516890%2C516697..516762%2C515214..515258%2C514158..514213%2C512313..512497%2C511793..511840%2C511603..511710%2C510404..510709));owner=coffea | |
| 59896 chr11 manual_curation exon 20237614 20237919 . - . Parent=GSCOCT00020471001 | |
| 59897 chr11 manual_curation exon 20238813 20238920 . - . Parent=GSCOCT00020471001 | |
| 59898 chr11 manual_curation exon 20239003 20239050 . - . Parent=GSCOCT00020471001 | |
| 59899 chr11 manual_curation exon 20239523 20239707 . - . Parent=GSCOCT00020471001 | |
| 59900 chr11 manual_curation exon 20241368 20241423 . - . Parent=GSCOCT00020471001 | |
| 59901 chr11 manual_curation exon 20242424 20242468 . - . Parent=GSCOCT00020471001 | |
| 59902 chr11 manual_curation exon 20243907 20243972 . - . Parent=GSCOCT00020471001 | |
| 59903 chr11 manual_curation exon 20244048 20244100 . - . Parent=GSCOCT00020471001 | |
| 59904 chr11 manual_curation exon 20244936 20245053 . - . Parent=GSCOCT00020471001 | |
| 59905 chr11 manual_curation exon 20245128 20245229 . - . Parent=GSCOCT00020471001 | |
| 59906 chr11 manual_curation exon 20245442 20245599 . - . Parent=GSCOCT00020471001 | |
| 59907 chr11 manual_curation exon 20245671 20245733 . - . Parent=GSCOCT00020471001 | |
| 59908 chr11 manual_curation CDS 20237614 20237919 . - 0 Parent=GSCOCT00020471001 | |
| 59909 chr11 manual_curation CDS 20238813 20238920 . - 0 Parent=GSCOCT00020471001 | |
| 59910 chr11 manual_curation CDS 20239003 20239050 . - 0 Parent=GSCOCT00020471001 | |
| 59911 chr11 manual_curation CDS 20239523 20239707 . - 1 Parent=GSCOCT00020471001 | |
| 59912 chr11 manual_curation CDS 20241368 20241423 . - 2 Parent=GSCOCT00020471001 | |
| 59913 chr11 manual_curation CDS 20242424 20242468 . - 2 Parent=GSCOCT00020471001 | |
| 59914 chr11 manual_curation CDS 20243907 20243972 . - 2 Parent=GSCOCT00020471001 | |
| 59915 chr11 manual_curation CDS 20244048 20244100 . - 0 Parent=GSCOCT00020471001 | |
| 59916 chr11 manual_curation CDS 20244936 20245053 . - 2 Parent=GSCOCT00020471001 | |
| 59917 chr11 manual_curation CDS 20245128 20245229 . - 2 Parent=GSCOCT00020471001 | |
| 59918 chr11 manual_curation CDS 20245442 20245599 . - 0 Parent=GSCOCT00020471001 | |
| 59919 chr11 manual_curation CDS 20245671 20245733 . - 0 Parent=GSCOCT00020471001 | |
| 59920 chr11 manual_curation gene 20254831 20261299 . - . ID=GSCOCG00020472001;Name=Cc11_g05280 | |
| 59921 chr11 manual_curation mRNA 20254831 20261299 . - . ID=GSCOCT00020472001;Parent=GSCOCG00020472001;Name=Cc11_g05280 | |
| 59922 chr11 manual_curation polypeptide 20254831 20261220 . - . ID=GSCOCP00020472001;Dbxref=InterPro:IPR006153,PFAM:PF00999,SwissProt:Q3YL57,SwissProt:Q9LKW9,TAIR:AT1G14660.1,TAIR:AT2G01980.1,TrEMBL:D2K3B5,TrEMBL:G5EM36,TrEMBL:Q4W3B5;Derives_from=GSCOCT00020472001;Name=Cc11_g05280;Ontology_term=CC_evidence_code:ISS,GO:0006812,GO:0015299,GO:0016021,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Sodium/hydrogen exchanger 7,CC_functional_completeness:fragment,CC_gene:NHX7,CC_gene:NHX8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020472001~ Sodium/hydrogen exchanger 7~ NHX7~ fragment;original_location=complement(join(533803..534010%2C527830..527880%2C527621..527739));owner=coffea | |
| 59923 chr11 manual_curation exon 20254831 20254949 . - . Parent=GSCOCT00020472001 | |
| 59924 chr11 manual_curation exon 20255040 20255090 . - . Parent=GSCOCT00020472001 | |
| 59925 chr11 manual_curation exon 20261013 20261299 . - . Parent=GSCOCT00020472001 | |
| 59926 chr11 manual_curation CDS 20254831 20254949 . - 1 Parent=GSCOCT00020472001 | |
| 59927 chr11 manual_curation CDS 20255040 20255090 . - 1 Parent=GSCOCT00020472001 | |
| 59928 chr11 manual_curation CDS 20261013 20261220 . - 0 Parent=GSCOCT00020472001 | |
| 59929 chr11 manual_curation gene 20310791 20312641 . + . ID=GSCOCG00020473001;Name=Cc11_g05290 | |
| 59930 chr11 manual_curation mRNA 20310791 20312641 . + . ID=GSCOCT00020473001;Parent=GSCOCG00020473001;Name=Cc11_g05290 | |
| 59931 chr11 manual_curation polypeptide 20311043 20312272 . + . ID=GSCOCP00020473001;Dbxref=GENE3D:G3DSA:3.10.110.10,InterPro:IPR008883,InterPro:IPR016135,InterPro:IPR017916,PFAM:PF05743,PFAM:PF09454,PROFILE:PS51312,SUPERFAMILY:SSF54495,SwissProt:Q6IRE4,SwissProt:Q9FFY6,SwissProt:Q9LHG8,TAIR:AT2G38830.1,TAIR:AT3G12400.1,TAIR:AT5G13860.1,TrEMBL:A9PJF9,TrEMBL:B9SHU4,TrEMBL:F6GWC1;Derives_from=GSCOCT00020473001;Name=Cc11_g05290;Ontology_term=CC_evidence_code:ISS,GO:0006464,GO:0015031,CC_EC_number:missing_EC_number,PRODUCT:Protein ELC,CC_functional_completeness:complete,CC_gene:ELC,CC_gene:ELCL,CC_gene:Tsg101;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020473001~ Protein ELC~ ELC~ complete;original_location=583833..585062;owner=coffea | |
| 59932 chr11 manual_curation exon 20310791 20312641 . + . Parent=GSCOCT00020473001 | |
| 59933 chr11 manual_curation CDS 20311043 20312272 . + 0 Parent=GSCOCT00020473001 | |
| 59934 chr11 manual_curation gene 20328693 20331200 . + . ID=GSCOCG00020474001;Name=Cc11_g05300 | |
| 59935 chr11 manual_curation mRNA 20328693 20331200 . + . ID=GSCOCT00020474001;Parent=GSCOCG00020474001;Name=Cc11_g05300 | |
| 59936 chr11 manual_curation polypeptide 20328693 20331200 . + . ID=GSCOCP00020474001;Dbxref=InterPro:IPR000719,InterPro:IPR001480,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF01453,PROFILE:PS50011,PROFILE:PS50927,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF51110,SUPERFAMILY:SSF56112,SwissProt:O65238,SwissProt:Q8RWZ5,SwissProt:Q9XID3,TAIR:AT1G34300.1,TAIR:AT4G32300.1,TAIR:AT5G35370.1,TrEMBL:B9HAE5,TrEMBL:B9IKX5,TrEMBL:F6H329;Derives_from=GSCOCT00020474001;Name=Cc11_g05300;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0005529,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5,CC_functional_completeness:complete,CC_gene:SD25,CC_gene:At5g35370,CC_gene:At1g34300;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020474001~ G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5~ SD25~ complete;original_location=join(601483..602575%2C602672..603990);owner=coffea | |
| 59937 chr11 manual_curation exon 20328693 20329785 . + . Parent=GSCOCT00020474001 | |
| 59938 chr11 manual_curation exon 20329882 20331200 . + . Parent=GSCOCT00020474001 | |
| 59939 chr11 manual_curation CDS 20328693 20329785 . + 0 Parent=GSCOCT00020474001 | |
| 59940 chr11 manual_curation CDS 20329882 20331200 . + 1 Parent=GSCOCT00020474001 | |
| 59941 chr11 manual_curation gene 20355214 20357670 . + . ID=GSCOCG00020477001;Name=Cc11_g05310 | |
| 59942 chr11 manual_curation mRNA 20355214 20357670 . + . ID=GSCOCT00020477001;Parent=GSCOCG00020477001;Name=Cc11_g05310 | |
| 59943 chr11 manual_curation polypeptide 20355214 20357670 . + . ID=GSCOCP00020477001;Dbxref=InterPro:IPR000719,InterPro:IPR001480,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF01453,PROFILE:PS50011,PROFILE:PS50927,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF51110,SUPERFAMILY:SSF56112,SwissProt:O65238,SwissProt:Q8RWZ5,SwissProt:Q9FLV4,TAIR:AT1G34300.1,TAIR:AT4G32300.1,TAIR:AT5G35370.1,TrEMBL:B9HAE5,TrEMBL:B9IKX5,TrEMBL:F6H329;Derives_from=GSCOCT00020477001;Name=Cc11_g05310;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0005529,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5,CC_functional_completeness:complete,CC_gene:SD25,CC_gene:At5g35370,CC_gene:At5g24080;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020477001~ G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5~ SD25~ complete;original_location=join(628004..629030%2C629142..630460);owner=coffea | |
| 59944 chr11 manual_curation exon 20355214 20356240 . + . Parent=GSCOCT00020477001 | |
| 59945 chr11 manual_curation exon 20356352 20357670 . + . Parent=GSCOCT00020477001 | |
| 59946 chr11 manual_curation CDS 20355214 20356240 . + 0 Parent=GSCOCT00020477001 | |
| 59947 chr11 manual_curation CDS 20356352 20357670 . + 1 Parent=GSCOCT00020477001 | |
| 59948 chr11 manual_curation gene 20363059 20411384 . + . ID=GSCOCG00020478001;Name=Cc11_g05320 | |
| 59949 chr11 manual_curation mRNA 20363059 20411384 . + . ID=GSCOCT00020478001;Parent=GSCOCG00020478001;Name=Cc11_g05320 | |
| 59950 chr11 manual_curation polypeptide 20364344 20411384 . + . ID=GSCOCP00020478001;Dbxref=InterPro:IPR000719,InterPro:IPR001480,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF01453,PROFILE:PS50011,PROFILE:PS50927,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF51110,SUPERFAMILY:SSF56112,SwissProt:O65238,SwissProt:Q8RWZ5,SwissProt:Q9XID3,TAIR:AT1G34300.1,TAIR:AT4G32300.1,TAIR:AT5G35370.1,TrEMBL:B9HAE5,TrEMBL:B9IKX5,TrEMBL:F6H329;Derives_from=GSCOCT00020478001;Name=Cc11_g05320;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0005529,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5,CC_functional_completeness:complete,CC_gene:SD25,CC_gene:At1g34300,CC_gene:At5g35370;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020478001~ G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5~ SD25~ complete;original_location=join(637134..637174%2C679968..680024%2C681768..682744%2C682856..684174);owner=coffea | |
| 59951 chr11 manual_curation exon 20363059 20363223 . + . Parent=GSCOCT00020478001 | |
| 59952 chr11 manual_curation exon 20363618 20363673 . + . Parent=GSCOCT00020478001 | |
| 59953 chr11 manual_curation exon 20363843 20364384 . + . Parent=GSCOCT00020478001 | |
| 59954 chr11 manual_curation exon 20407178 20407234 . + . Parent=GSCOCT00020478001 | |
| 59955 chr11 manual_curation exon 20408978 20409954 . + . Parent=GSCOCT00020478001 | |
| 59956 chr11 manual_curation exon 20410066 20411384 . + . Parent=GSCOCT00020478001 | |
| 59957 chr11 manual_curation CDS 20364344 20364384 . + 0 Parent=GSCOCT00020478001 | |
| 59958 chr11 manual_curation CDS 20407178 20407234 . + 2 Parent=GSCOCT00020478001 | |
| 59959 chr11 manual_curation CDS 20408978 20409954 . + 2 Parent=GSCOCT00020478001 | |
| 59960 chr11 manual_curation CDS 20410066 20411384 . + 1 Parent=GSCOCT00020478001 | |
| 59961 chr11 manual_curation gene 20422344 20429050 . + . ID=GSCOCG00020479001;Name=Cc11_g05330 | |
| 59962 chr11 manual_curation mRNA 20422344 20429050 . + . ID=GSCOCT00020479001;Parent=GSCOCG00020479001;Name=Cc11_g05330 | |
| 59963 chr11 manual_curation polypeptide 20424278 20429050 . + . ID=GSCOCP00020479001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,SwissProt:O22820,SwissProt:O22822,SwissProt:Q9SKC1,TAIR:AT2G31790.1,TAIR:AT2G43820.1,TAIR:AT2G43840.2,TrEMBL:A5BTJ4,TrEMBL:B9SV07,TrEMBL:F6HAX9;Derives_from=GSCOCT00020479001;Name=Cc11_g05330;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.121,PRODUCT:Putative UDP-glycosyltransferase 74F1,CC_functional_completeness:modules,CC_gene:UGT74F1,CC_gene:UGT74F2,CC_gene:UGT74C1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020479001~ Putative UDP-glycosyltransferase 74F1~ UGT74F1~ modules;original_location=join(697068..697706%2C698401..699119%2C699992..700291%2C701690..701840);owner=coffea | |
| 59964 chr11 manual_curation exon 20422344 20422635 . + . Parent=GSCOCT00020479001 | |
| 59965 chr11 manual_curation exon 20424237 20424916 . + . Parent=GSCOCT00020479001 | |
| 59966 chr11 manual_curation exon 20425611 20426329 . + . Parent=GSCOCT00020479001 | |
| 59967 chr11 manual_curation exon 20427202 20427501 . + . Parent=GSCOCT00020479001 | |
| 59968 chr11 manual_curation exon 20428900 20429050 . + . Parent=GSCOCT00020479001 | |
| 59969 chr11 manual_curation CDS 20424278 20424916 . + 0 Parent=GSCOCT00020479001 | |
| 59970 chr11 manual_curation CDS 20425611 20426329 . + 0 Parent=GSCOCT00020479001 | |
| 59971 chr11 manual_curation CDS 20427202 20427501 . + 2 Parent=GSCOCT00020479001 | |
| 59972 chr11 manual_curation CDS 20428900 20429050 . + 2 Parent=GSCOCT00020479001 | |
| 59973 chr11 manual_curation gene 20431875 20433956 . + . ID=GSCOCG00020480001;Name=Cc11_g05340 | |
| 59974 chr11 manual_curation mRNA 20431875 20433956 . + . ID=GSCOCT00020480001;Parent=GSCOCG00020480001;Name=Cc11_g05340 | |
| 59975 chr11 manual_curation polypeptide 20431875 20433956 . + . ID=GSCOCP00020480001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,SwissProt:P0C7P7,SwissProt:Q9SKC1,SwissProt:Q9SYK9,TAIR:AT1G05675.1,TAIR:AT1G05680.1,TAIR:AT2G31790.1,TrEMBL:A5AWH1,TrEMBL:A5BTJ4,TrEMBL:F6HAX9;Derives_from=GSCOCT00020480001;Name=Cc11_g05340;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:Putative UDP-glycosyltransferase 74C1,CC_functional_completeness:fragment,CC_gene:UGT74C1,CC_gene:UGT74E1,CC_gene:UGT74E2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020480001~ Putative UDP-glycosyltransferase 74C1~ UGT74C1~ fragment;original_location=join(704665..704814%2C705105..705302%2C706015..706746);owner=coffea | |
| 59976 chr11 manual_curation exon 20431875 20432024 . + . Parent=GSCOCT00020480001 | |
| 59977 chr11 manual_curation exon 20432315 20432512 . + . Parent=GSCOCT00020480001 | |
| 59978 chr11 manual_curation exon 20433225 20433956 . + . Parent=GSCOCT00020480001 | |
| 59979 chr11 manual_curation CDS 20431875 20432024 . + 0 Parent=GSCOCT00020480001 | |
| 59980 chr11 manual_curation CDS 20432315 20432512 . + 0 Parent=GSCOCT00020480001 | |
| 59981 chr11 manual_curation CDS 20433225 20433956 . + 0 Parent=GSCOCT00020480001 | |
| 59982 chr11 manual_curation gene 20629984 20630214 . + . ID=GSCOCG00020483001;Name=Cc11_g05350 | |
| 59983 chr11 manual_curation mRNA 20629984 20630214 . + . ID=GSCOCT00020483001;Parent=GSCOCG00020483001;Name=Cc11_g05350 | |
| 59984 chr11 manual_curation polypeptide 20629984 20630214 . + . ID=GSCOCP00020483001;Dbxref=TAIR:AT1G35170.1,TAIR:AT1G35180.1,TAIR:AT1G45010.1,TrEMBL:C6T7D6,TrEMBL:E0CQI4,TrEMBL:I1MXY9;Derives_from=GSCOCT00020483001;Name=Cc11_g05350;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:TRAM%2C LAG1 and CLN8 (TLC) lipid-sensing domain containing protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020483001~ TRAM%2C LAG1 and CLN8 (TLC) lipid-sensing domain containing protein~ unknown_gene~ fragment;original_location=902774..903004;owner=coffea | |
| 59985 chr11 manual_curation exon 20629984 20630214 . + . Parent=GSCOCT00020483001 | |
| 59986 chr11 manual_curation CDS 20629984 20630214 . + 0 Parent=GSCOCT00020483001 | |
| 59987 chr11 manual_curation gene 20667485 20669443 . - . ID=GSCOCG00020485001;Name=Cc11_g05360 | |
| 59988 chr11 manual_curation mRNA 20667485 20669443 . - . ID=GSCOCT00020485001;Parent=GSCOCG00020485001;Name=Cc11_g05360 | |
| 59989 chr11 manual_curation polypeptide 20667485 20669443 . - . ID=GSCOCP00020485001;Dbxref=InterPro:IPR013057,PFAM:PF01490,SwissProt:O80592,SwissProt:P92934,SwissProt:Q42400,TAIR:AT1G10010.1,TAIR:AT1G58360.1,TAIR:AT5G49630.1,TrEMBL:C6THQ4,TrEMBL:E0CNV4,TrEMBL:G7J416;Derives_from=GSCOCT00020485001;Name=Cc11_g05360;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Amino acid transporter%2C transmembrane,CC_functional_completeness:complete,CC_gene:AAP6,CC_gene:AAP1,CC_gene:AAP8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020485001~ Putative Amino acid transporter%2C transmembrane~ AAP6~ complete;original_location=complement(join(942169..942233%2C941680..941902%2C941332..941559%2C940275..940760));owner=coffea | |
| 59990 chr11 manual_curation exon 20667485 20667970 . - . Parent=GSCOCT00020485001 | |
| 59991 chr11 manual_curation exon 20668542 20668769 . - . Parent=GSCOCT00020485001 | |
| 59992 chr11 manual_curation exon 20668890 20669112 . - . Parent=GSCOCT00020485001 | |
| 59993 chr11 manual_curation exon 20669379 20669443 . - . Parent=GSCOCT00020485001 | |
| 59994 chr11 manual_curation CDS 20667485 20667970 . - 0 Parent=GSCOCT00020485001 | |
| 59995 chr11 manual_curation CDS 20668542 20668769 . - 0 Parent=GSCOCT00020485001 | |
| 59996 chr11 manual_curation CDS 20668890 20669112 . - 2 Parent=GSCOCT00020485001 | |
| 59997 chr11 manual_curation CDS 20669379 20669443 . - 0 Parent=GSCOCT00020485001 | |
| 59998 chr11 manual_curation gene 20706673 20709403 . + . ID=GSCOCG00020487001;Name=Cc11_g05370 | |
| 59999 chr11 manual_curation mRNA 20706673 20709403 . + . ID=GSCOCT00020487001;Parent=GSCOCG00020487001;Name=Cc11_g05370 | |
| 60000 chr11 manual_curation polypeptide 20706673 20709403 . + . ID=GSCOCP00020487001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,InterPro:IPR018247,PFAM:PF00931,PRINTS:PR00364,PROSITE:PS00018,SwissProt:Q6L3Z4,SwissProt:Q6L3Z7,SwissProt:Q6L400,TAIR:AT3G46530.1,TAIR:AT3G46710.1,TAIR:AT3G46730.1,TrEMBL:Q6L432,TrEMBL:Q96485,TrEMBL:Q9LLD0;Derives_from=GSCOCT00020487001;Name=Cc11_g05370;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1B-16,CC_functional_completeness:fragment,CC_gene:R1B-16,CC_gene:R1B-14,CC_gene:R1B-12;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020487001~ Putative late blight resistance protein homolog R1B-16~ R1B-16~ fragment;original_location=join(979463..980397%2C980449..980664%2C981287..981312%2C981826..982193);owner=coffea | |
| 60001 chr11 manual_curation exon 20706673 20707607 . + . Parent=GSCOCT00020487001 | |
| 60002 chr11 manual_curation exon 20707659 20707874 . + . Parent=GSCOCT00020487001 | |
| 60003 chr11 manual_curation exon 20708497 20708522 . + . Parent=GSCOCT00020487001 | |
| 60004 chr11 manual_curation exon 20709036 20709403 . + . Parent=GSCOCT00020487001 | |
| 60005 chr11 manual_curation CDS 20706673 20707607 . + 0 Parent=GSCOCT00020487001 | |
| 60006 chr11 manual_curation CDS 20707659 20707874 . + 2 Parent=GSCOCT00020487001 | |
| 60007 chr11 manual_curation CDS 20708497 20708522 . + 2 Parent=GSCOCT00020487001 | |
| 60008 chr11 manual_curation CDS 20709036 20709403 . + 1 Parent=GSCOCT00020487001 | |
| 60009 chr11 manual_curation gene 20724105 20726886 . + . ID=GSCOCG00020489001;Name=Cc11_g05380 | |
| 60010 chr11 manual_curation mRNA 20724105 20726886 . + . ID=GSCOCT00020489001;Parent=GSCOCG00020489001;Name=Cc11_g05380 | |
| 60011 chr11 manual_curation polypeptide 20724105 20726886 . + . ID=GSCOCP00020489001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q39214,SwissProt:Q7XBQ9,SwissProt:Q9M667,TAIR:AT1G50180.1,TAIR:AT3G07040.1,TAIR:AT3G46530.1,TrEMBL:A7U1Q8,TrEMBL:A7U1R1,TrEMBL:A7U1R2,TrEMBL:A7U1R7,TrEMBL:A7U1U9,TrEMBL:Q8GSU6;Derives_from=GSCOCT00020489001;Name=Cc11_g05380;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative Disease resistance protein RPM1,CC_functional_completeness:fragment,CC_gene:RPM1,CC_gene:RGA2,CC_gene:RPP13;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020489001~ Putative Disease resistance protein RPM1~ RPM1~ fragment;original_location=join(996895..997303%2C997463..998026%2C998577..998864%2C998958..999676);owner=coffea | |
| 60012 chr11 manual_curation exon 20724105 20724513 . + . Parent=GSCOCT00020489001 | |
| 60013 chr11 manual_curation exon 20724673 20725236 . + . Parent=GSCOCT00020489001 | |
| 60014 chr11 manual_curation exon 20725787 20726074 . + . Parent=GSCOCT00020489001 | |
| 60015 chr11 manual_curation exon 20726168 20726886 . + . Parent=GSCOCT00020489001 | |
| 60016 chr11 manual_curation CDS 20724105 20724513 . + 0 Parent=GSCOCT00020489001 | |
| 60017 chr11 manual_curation CDS 20724673 20725236 . + 1 Parent=GSCOCT00020489001 | |
| 60018 chr11 manual_curation CDS 20725787 20726074 . + 1 Parent=GSCOCT00020489001 | |
| 60019 chr11 manual_curation CDS 20726168 20726886 . + 1 Parent=GSCOCT00020489001 | |
| 60020 chr11 manual_curation gene 20728371 20731275 . - . ID=GSCOCG00020490001;Name=Cc11_g05390 | |
| 60021 chr11 manual_curation mRNA 20728371 20731275 . - . ID=GSCOCT00020490001;Parent=GSCOCG00020490001;Name=Cc11_g05390 | |
| 60022 chr11 manual_curation polypeptide 20728371 20730900 . - . ID=GSCOCP00020490001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q6L3X3,SwissProt:Q6L3Z7,SwissProt:Q6L403,TAIR:AT3G46730.1,TAIR:AT5G43470.1,TAIR:AT5G48620.1,TrEMBL:G8E840,TrEMBL:G8E841,TrEMBL:G8E842;Derives_from=GSCOCT00020490001;Name=Cc11_g05390;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1B-17,CC_functional_completeness:fragment,CC_gene:R1B-17,CC_gene:R1B-8,CC_gene:R1B-14;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020490001~ Putative late blight resistance protein homolog R1B-17~ R1B-17~ fragment;original_location=complement(join(1003556..1003690%2C1001988..1003500%2C1001161..1001924));owner=coffea | |
| 60023 chr11 manual_curation exon 20728371 20729134 . - . Parent=GSCOCT00020490001 | |
| 60024 chr11 manual_curation exon 20729198 20730710 . - . Parent=GSCOCT00020490001 | |
| 60025 chr11 manual_curation exon 20730766 20731275 . - . Parent=GSCOCT00020490001 | |
| 60026 chr11 manual_curation CDS 20728371 20729134 . - 1 Parent=GSCOCT00020490001 | |
| 60027 chr11 manual_curation CDS 20729198 20730710 . - 0 Parent=GSCOCT00020490001 | |
| 60028 chr11 manual_curation CDS 20730766 20730900 . - 0 Parent=GSCOCT00020490001 | |
| 60029 chr11 manual_curation gene 20780409 20783262 . + . ID=GSCOCG00020496001;Name=Cc11_g05400 | |
| 60030 chr11 manual_curation mRNA 20780409 20783262 . + . ID=GSCOCT00020496001;Parent=GSCOCG00020496001;Name=Cc11_g05400 | |
| 60031 chr11 manual_curation polypeptide 20780409 20783262 . + . ID=GSCOCP00020496001;Dbxref=InterPro:IPR004240,PANTHER:PTHR10766,PFAM:PF02990,SwissProt:Q54ZW0,SwissProt:Q9ET30,SwissProt:Q9HD45,TAIR:AT1G14670.1,TAIR:AT2G01970.1,TAIR:AT5G37310.1,TrEMBL:B8AK21,TrEMBL:B9MX19,TrEMBL:B9S7D1;Derives_from=GSCOCT00020496001;Name=Cc11_g05400;Ontology_term=CC_evidence_code:ISS,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Putative phagocytic receptor 1b,CC_functional_completeness:fragment,CC_gene:phg1b,CC_gene:Tm9sf3,CC_gene:TM9SF3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020496001~ Putative phagocytic receptor 1b~ phg1b~ fragment;original_location=join(1053199..1053260%2C1053724..1054308%2C1054427..1054595%2C1054654..1054761%2C1054964..1055040%2C1055830..1056052);owner=coffea | |
| 60032 chr11 manual_curation exon 20780409 20780470 . + . Parent=GSCOCT00020496001 | |
| 60033 chr11 manual_curation exon 20780934 20781518 . + . Parent=GSCOCT00020496001 | |
| 60034 chr11 manual_curation exon 20781637 20781805 . + . Parent=GSCOCT00020496001 | |
| 60035 chr11 manual_curation exon 20781864 20781971 . + . Parent=GSCOCT00020496001 | |
| 60036 chr11 manual_curation exon 20782174 20782250 . + . Parent=GSCOCT00020496001 | |
| 60037 chr11 manual_curation exon 20783040 20783262 . + . Parent=GSCOCT00020496001 | |
| 60038 chr11 manual_curation CDS 20780409 20780470 . + 0 Parent=GSCOCT00020496001 | |
| 60039 chr11 manual_curation CDS 20780934 20781518 . + 2 Parent=GSCOCT00020496001 | |
| 60040 chr11 manual_curation CDS 20781637 20781805 . + 2 Parent=GSCOCT00020496001 | |
| 60041 chr11 manual_curation CDS 20781864 20781971 . + 0 Parent=GSCOCT00020496001 | |
| 60042 chr11 manual_curation CDS 20782174 20782250 . + 0 Parent=GSCOCT00020496001 | |
| 60043 chr11 manual_curation CDS 20783040 20783262 . + 2 Parent=GSCOCT00020496001 | |
| 60044 chr11 manual_curation gene 20783707 20788950 . - . ID=GSCOCG00020497001;Name=Cc11_g05410 | |
| 60045 chr11 manual_curation mRNA 20783707 20788950 . - . ID=GSCOCT00020497001;Parent=GSCOCG00020497001;Name=Cc11_g05410 | |
| 60046 chr11 manual_curation polypeptide 20783980 20787265 . - . ID=GSCOCP00020497001;Dbxref=InterPro:IPR004240,PANTHER:PTHR10766,PFAM:PF02990,SwissProt:A4IFE9,SwissProt:Q54ZW0,SwissProt:Q9DBU0,TAIR:AT1G14670.1,TAIR:AT2G01970.1,TAIR:AT5G37310.1,TrEMBL:B9H3J8,TrEMBL:B9S7D0,TrEMBL:B9S7D1;Derives_from=GSCOCT00020497001;Name=Cc11_g05410;Ontology_term=CC_evidence_code:ISS,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Putative phagocytic receptor 1b,CC_functional_completeness:complete,CC_gene:phg1b,CC_gene:Tm9sf1,CC_gene:TM9SF1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020497001~ Putative phagocytic receptor 1b~ phg1b~ complete;original_location=complement(join(1059907..1060055%2C1059339..1059379%2C1058646..1059222%2C1058411..1058548%2C1058157..1058313%2C1057570..1058054%2C1056770..1056986));owner=coffea | |
| 60047 chr11 manual_curation exon 20787373 20787570 . - . Parent=GSCOCT00020497001 | |
| 60048 chr11 manual_curation exon 20788845 20788950 . - . Parent=GSCOCT00020497001 | |
| 60049 chr11 manual_curation exon 20783707 20784196 . - . Parent=GSCOCT00020497001 | |
| 60050 chr11 manual_curation exon 20784780 20785264 . - . Parent=GSCOCT00020497001 | |
| 60051 chr11 manual_curation exon 20785367 20785523 . - . Parent=GSCOCT00020497001 | |
| 60052 chr11 manual_curation exon 20785621 20785758 . - . Parent=GSCOCT00020497001 | |
| 60053 chr11 manual_curation exon 20785856 20786432 . - . Parent=GSCOCT00020497001 | |
| 60054 chr11 manual_curation exon 20786549 20786589 . - . Parent=GSCOCT00020497001 | |
| 60055 chr11 manual_curation exon 20787117 20787279 . - . Parent=GSCOCT00020497001 | |
| 60056 chr11 manual_curation CDS 20783980 20784196 . - 2 Parent=GSCOCT00020497001 | |
| 60057 chr11 manual_curation CDS 20784780 20785264 . - 0 Parent=GSCOCT00020497001 | |
| 60058 chr11 manual_curation CDS 20785367 20785523 . - 2 Parent=GSCOCT00020497001 | |
| 60059 chr11 manual_curation CDS 20785621 20785758 . - 2 Parent=GSCOCT00020497001 | |
| 60060 chr11 manual_curation CDS 20785856 20786432 . - 1 Parent=GSCOCT00020497001 | |
| 60061 chr11 manual_curation CDS 20786549 20786589 . - 2 Parent=GSCOCT00020497001 | |
| 60062 chr11 manual_curation CDS 20787117 20787265 . - 0 Parent=GSCOCT00020497001 | |
| 60063 chr11 manual_curation gene 20790017 20791086 . - . ID=GSCOCG00020498001;Name=Cc11_g05420 | |
| 60064 chr11 manual_curation mRNA 20790017 20791086 . - . ID=GSCOCT00020498001;Parent=GSCOCG00020498001;Name=Cc11_g05420 | |
| 60065 chr11 manual_curation polypeptide 20790017 20791086 . - . ID=GSCOCP00020498001;Dbxref=TAIR:AT5G18750.1,TAIR:AT5G27240.1,TrEMBL:F6HDI6,TrEMBL:F6HTY9,TrEMBL:I1NC39;Derives_from=GSCOCT00020498001;Name=Cc11_g05420;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative DNAJ heat shock N-terminal domain-containing protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020498001~ Putative DNAJ heat shock N-terminal domain-containing protein~ unknown_gene~ fragment;original_location=complement(join(1063552..1063876%2C1063400..1063494%2C1062807..1062938));owner=coffea | |
| 60066 chr11 manual_curation exon 20790017 20790148 . - . Parent=GSCOCT00020498001 | |
| 60067 chr11 manual_curation exon 20790610 20790704 . - . Parent=GSCOCT00020498001 | |
| 60068 chr11 manual_curation exon 20790762 20791086 . - . Parent=GSCOCT00020498001 | |
| 60069 chr11 manual_curation CDS 20790017 20790148 . - 0 Parent=GSCOCT00020498001 | |
| 60070 chr11 manual_curation CDS 20790610 20790704 . - 1 Parent=GSCOCT00020498001 | |
| 60071 chr11 manual_curation CDS 20790762 20791086 . - 0 Parent=GSCOCT00020498001 | |
| 60072 chr11 manual_curation gene 20799115 20806211 . - . ID=GSCOCG00020499001;Name=Cc11_g05430 | |
| 60073 chr11 manual_curation mRNA 20799115 20806211 . - . ID=GSCOCT00020499001;Parent=GSCOCG00020499001;Name=Cc11_g05430 | |
| 60074 chr11 manual_curation polypeptide 20799115 20806211 . - . ID=GSCOCP00020499001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,PFAM:PF00560,SMART:SM00369,SwissProt:C0LGQ5,SwissProt:Q9C9H7,SwissProt:Q9FL28,TAIR:AT2G34930.1,TAIR:AT3G05650.1,TAIR:AT3G11010.1,TrEMBL:F6H3Z2,TrEMBL:F6H9K0,TrEMBL:F6H9K2;Derives_from=GSCOCT00020499001;Name=Cc11_g05430;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:3.1.3.16,PRODUCT:Putative Receptor-like protein 12,CC_functional_completeness:complete,CC_gene:RLP12,CC_gene:GSO1,CC_gene:FLS2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020499001~ Putative Receptor-like protein 12~ RLP12~ complete;original_location=complement(join(1078732..1079001%2C1077810..1077957%2C1077468..1077680%2C1074228..1074333%2C1073341..1073771%2C1071905..1073181));owner=coffea | |
| 60075 chr11 manual_curation exon 20799115 20800391 . - . Parent=GSCOCT00020499001 | |
| 60076 chr11 manual_curation exon 20800551 20800981 . - . Parent=GSCOCT00020499001 | |
| 60077 chr11 manual_curation exon 20801438 20801543 . - . Parent=GSCOCT00020499001 | |
| 60078 chr11 manual_curation exon 20804678 20804890 . - . Parent=GSCOCT00020499001 | |
| 60079 chr11 manual_curation exon 20805020 20805167 . - . Parent=GSCOCT00020499001 | |
| 60080 chr11 manual_curation exon 20805942 20806211 . - . Parent=GSCOCT00020499001 | |
| 60081 chr11 manual_curation CDS 20799115 20800391 . - 1 Parent=GSCOCT00020499001 | |
| 60082 chr11 manual_curation CDS 20800551 20800981 . - 2 Parent=GSCOCT00020499001 | |
| 60083 chr11 manual_curation CDS 20801438 20801543 . - 1 Parent=GSCOCT00020499001 | |
| 60084 chr11 manual_curation CDS 20804678 20804890 . - 1 Parent=GSCOCT00020499001 | |
| 60085 chr11 manual_curation CDS 20805020 20805167 . - 0 Parent=GSCOCT00020499001 | |
| 60086 chr11 manual_curation CDS 20805942 20806211 . - 0 Parent=GSCOCT00020499001 | |
| 60087 chr11 manual_curation gene 20848821 20853119 . - . ID=GSCOCG00020500001;Name=Cc11_g05440 | |
| 60088 chr11 manual_curation mRNA 20848821 20853119 . - . ID=GSCOCT00020500001;Parent=GSCOCG00020500001;Name=Cc11_g05440 | |
| 60089 chr11 manual_curation polypeptide 20848990 20852227 . - . ID=GSCOCP00020500001;Dbxref=InterPro:IPR004240,PANTHER:PTHR10766,PFAM:PF02990,SwissProt:O15321,SwissProt:Q54ZW0,SwissProt:Q9DBU0,TAIR:AT1G14670.1,TAIR:AT2G01970.1,TAIR:AT5G37310.1,TrEMBL:B9S7D1,TrEMBL:D7LPY1,TrEMBL:D7T8E1;Derives_from=GSCOCT00020500001;Name=Cc11_g05440;Ontology_term=CC_evidence_code:ISS,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Putative phagocytic receptor 1b,CC_functional_completeness:complete,CC_gene:phg1b,CC_gene:Tm9sf1,CC_gene:TM9SF1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020500001~ Putative phagocytic receptor 1b~ phg1b~ complete;original_location=complement(join(1124869..1125017%2C1124312..1124352%2C1123646..1124222%2C1123397..1123525%2C1123136..1123292%2C1122554..1123038%2C1121780..1121999));owner=coffea | |
| 60090 chr11 manual_curation exon 20853073 20853119 . - . Parent=GSCOCT00020500001 | |
| 60091 chr11 manual_curation exon 20848821 20849209 . - . Parent=GSCOCT00020500001 | |
| 60092 chr11 manual_curation exon 20849764 20850248 . - . Parent=GSCOCT00020500001 | |
| 60093 chr11 manual_curation exon 20850346 20850502 . - . Parent=GSCOCT00020500001 | |
| 60094 chr11 manual_curation exon 20850607 20850735 . - . Parent=GSCOCT00020500001 | |
| 60095 chr11 manual_curation exon 20850856 20851432 . - . Parent=GSCOCT00020500001 | |
| 60096 chr11 manual_curation exon 20851522 20851562 . - . Parent=GSCOCT00020500001 | |
| 60097 chr11 manual_curation exon 20852079 20852237 . - . Parent=GSCOCT00020500001 | |
| 60098 chr11 manual_curation CDS 20848990 20849209 . - 2 Parent=GSCOCT00020500001 | |
| 60099 chr11 manual_curation CDS 20849764 20850248 . - 0 Parent=GSCOCT00020500001 | |
| 60100 chr11 manual_curation CDS 20850346 20850502 . - 2 Parent=GSCOCT00020500001 | |
| 60101 chr11 manual_curation CDS 20850607 20850735 . - 2 Parent=GSCOCT00020500001 | |
| 60102 chr11 manual_curation CDS 20850856 20851432 . - 1 Parent=GSCOCT00020500001 | |
| 60103 chr11 manual_curation CDS 20851522 20851562 . - 2 Parent=GSCOCT00020500001 | |
| 60104 chr11 manual_curation CDS 20852079 20852227 . - 0 Parent=GSCOCT00020500001 | |
| 60105 chr11 manual_curation gene 20853420 20854103 . - . ID=GSCOCG00020501001;Name=Cc11_g05450 | |
| 60106 chr11 manual_curation mRNA 20853420 20854103 . - . ID=GSCOCT00020501001;Parent=GSCOCG00020501001;Name=Cc11_g05450 | |
| 60107 chr11 manual_curation polypeptide 20853420 20853788 . - . ID=GSCOCP00020501001;Derives_from=GSCOCT00020501001;Name=Cc11_g05450;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020501001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(1126210..1126578);owner=coffea | |
| 60108 chr11 manual_curation exon 20853420 20854103 . - . Parent=GSCOCT00020501001 | |
| 60109 chr11 manual_curation CDS 20853420 20853788 . - 0 Parent=GSCOCT00020501001 | |
| 60110 chr11 manual_curation gene 20859020 20859940 . + . ID=GSCOCG00020503001;Name=Cc11_g05460 | |
| 60111 chr11 manual_curation mRNA 20859020 20859940 . + . ID=GSCOCT00020503001;Parent=GSCOCG00020503001;Name=Cc11_g05460 | |
| 60112 chr11 manual_curation polypeptide 20859020 20859481 . + . ID=GSCOCP00020503001;Dbxref=GENE3D:G3DSA:3.30.420.80,InterPro:IPR001971,PANTHER:PTHR11759,PFAM:PF00411,PIR:PIRSF002131,SwissProt:Q0ANS3,SwissProt:Q4G348,SwissProt:Q7NQH5,TAIR:AT1G31817.1,TrEMBL:C6TCH3,TrEMBL:F6I489,TrEMBL:I1L3J2;Derives_from=GSCOCT00020503001;Name=Cc11_g05460;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:Putative 30S ribosomal protein S11,CC_functional_completeness:modules,CC_gene:rpsK,CC_gene:rps11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020503001~ Putative 30S ribosomal protein S11~ rpsK~ modules;original_location=1131810..1132271;owner=coffea | |
| 60113 chr11 manual_curation exon 20859020 20859940 . + . Parent=GSCOCT00020503001 | |
| 60114 chr11 manual_curation CDS 20859020 20859481 . + 0 Parent=GSCOCT00020503001 | |
| 60115 chr11 manual_curation gene 20863339 20865447 . + . ID=GSCOCG00020504001;Name=Cc11_g05470 | |
| 60116 chr11 manual_curation mRNA 20863339 20865447 . + . ID=GSCOCT00020504001;Parent=GSCOCG00020504001;Name=Cc11_g05470 | |
| 60117 chr11 manual_curation polypeptide 20863668 20865447 . + . ID=GSCOCP00020504001;Dbxref=InterPro:IPR004240,PANTHER:PTHR10766,PFAM:PF02990,SwissProt:Q54ZW0,SwissProt:Q9ET30,SwissProt:Q9HD45,TAIR:AT1G14670.1,TAIR:AT2G01970.1,TAIR:AT5G37310.1,TrEMBL:C7SI09,TrEMBL:D7LPY1,TrEMBL:D7T8E1;Derives_from=GSCOCT00020504001;Name=Cc11_g05470;Ontology_term=CC_evidence_code:ISS,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Putative Transmembrane 9 superfamily member 3,CC_functional_completeness:fragment,CC_gene:Tm9sf3,CC_gene:TM9SF3,CC_gene:phg1b;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020504001~ Putative Transmembrane 9 superfamily member 3~ Tm9sf3~ fragment;original_location=join(1136458..1136612%2C1137240..1137280%2C1137381..1137707%2C1137765..1137966%2C1138072..1138237);owner=coffea | |
| 60118 chr11 manual_curation exon 20863339 20863822 . + . Parent=GSCOCT00020504001 | |
| 60119 chr11 manual_curation exon 20864450 20864490 . + . Parent=GSCOCT00020504001 | |
| 60120 chr11 manual_curation exon 20864591 20864917 . + . Parent=GSCOCT00020504001 | |
| 60121 chr11 manual_curation exon 20864975 20865176 . + . Parent=GSCOCT00020504001 | |
| 60122 chr11 manual_curation exon 20865282 20865447 . + . Parent=GSCOCT00020504001 | |
| 60123 chr11 manual_curation CDS 20863668 20863822 . + 0 Parent=GSCOCT00020504001 | |
| 60124 chr11 manual_curation CDS 20864450 20864490 . + 2 Parent=GSCOCT00020504001 | |
| 60125 chr11 manual_curation CDS 20864591 20864917 . + 1 Parent=GSCOCT00020504001 | |
| 60126 chr11 manual_curation CDS 20864975 20865176 . + 1 Parent=GSCOCT00020504001 | |
| 60127 chr11 manual_curation CDS 20865282 20865447 . + 2 Parent=GSCOCT00020504001 | |
| 60128 chr11 manual_curation gene 20872020 20873878 . + . ID=GSCOCG00020505001;Name=Cc11_g05480 | |
| 60129 chr11 manual_curation mRNA 20872020 20873878 . + . ID=GSCOCT00020505001;Parent=GSCOCG00020505001;Name=Cc11_g05480 | |
| 60130 chr11 manual_curation polypeptide 20872020 20873878 . + . ID=GSCOCP00020505001;Dbxref=InterPro:IPR004240,PANTHER:PTHR10766,PFAM:PF02990,SwissProt:A4IFE9,SwissProt:Q54ZW0,SwissProt:Q9DBU0,TAIR:AT1G14670.1,TAIR:AT2G01970.1,TAIR:AT5G37310.1,TrEMBL:B8BFL0,TrEMBL:B9S7D0,TrEMBL:I1QS72;Derives_from=GSCOCT00020505001;Name=Cc11_g05480;Ontology_term=CC_evidence_code:ISS,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Putative phagocytic receptor 1b,CC_functional_completeness:fragment,CC_gene:phg1b,CC_gene:TM9SF1,CC_gene:Tm9sf1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020505001~ Putative phagocytic receptor 1b~ phg1b~ fragment;original_location=join(1144810..1144865%2C1144924..1145080%2C1145175..1145659%2C1146392..1146668);owner=coffea | |
| 60131 chr11 manual_curation exon 20872020 20872075 . + . Parent=GSCOCT00020505001 | |
| 60132 chr11 manual_curation exon 20872134 20872290 . + . Parent=GSCOCT00020505001 | |
| 60133 chr11 manual_curation exon 20872385 20872869 . + . Parent=GSCOCT00020505001 | |
| 60134 chr11 manual_curation exon 20873602 20873878 . + . Parent=GSCOCT00020505001 | |
| 60135 chr11 manual_curation CDS 20872020 20872075 . + 0 Parent=GSCOCT00020505001 | |
| 60136 chr11 manual_curation CDS 20872134 20872290 . + 2 Parent=GSCOCT00020505001 | |
| 60137 chr11 manual_curation CDS 20872385 20872869 . + 0 Parent=GSCOCT00020505001 | |
| 60138 chr11 manual_curation CDS 20873602 20873878 . + 2 Parent=GSCOCT00020505001 | |
| 60139 chr11 manual_curation gene 20877706 20879687 . + . ID=GSCOCG00020506001;Name=Cc11_g05490 | |
| 60140 chr11 manual_curation mRNA 20877706 20879687 . + . ID=GSCOCT00020506001;Parent=GSCOCG00020506001;Name=Cc11_g05490 | |
| 60141 chr11 manual_curation polypeptide 20877929 20879431 . + . ID=GSCOCP00020506001;Dbxref=GENE3D:G3DSA:3.30.429.10,InterPro:IPR001398,InterPro:IPR014347,PANTHER:PTHR11954,PFAM:PF01187,PRODOM:PD004816,SwissProt:O44786,SwissProt:P81748,SwissProt:P91850,TAIR:AT3G51660.1,TAIR:AT5G01650.2,TAIR:AT5G57170.2,TrEMBL:B3TLP2,TrEMBL:B7FN58,TrEMBL:B9SL16;Derives_from=GSCOCT00020506001;Name=Cc11_g05490;Ontology_term=CC_evidence_code:ISS,CC_EC_number:5.3.2.1,PRODUCT:Putative Macrophage migration inhibitory factor homolog,CC_functional_completeness:complete,CC_gene:Bm1_28435,CC_gene:MIF;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020506001~ Putative Macrophage migration inhibitory factor homolog~ Bm1_28435~ complete;original_location=join(1150719..1150829%2C1151656..1151856%2C1152186..1152221);owner=coffea | |
| 60142 chr11 manual_curation exon 20877706 20878039 . + . Parent=GSCOCT00020506001 | |
| 60143 chr11 manual_curation exon 20878866 20879066 . + . Parent=GSCOCT00020506001 | |
| 60144 chr11 manual_curation exon 20879396 20879687 . + . Parent=GSCOCT00020506001 | |
| 60145 chr11 manual_curation CDS 20877929 20878039 . + 0 Parent=GSCOCT00020506001 | |
| 60146 chr11 manual_curation CDS 20878866 20879066 . + 0 Parent=GSCOCT00020506001 | |
| 60147 chr11 manual_curation CDS 20879396 20879431 . + 0 Parent=GSCOCT00020506001 | |
| 60148 chr11 manual_curation gene 20893243 20895459 . + . ID=GSCOCG00020507001;Name=Cc11_g05500 | |
| 60149 chr11 manual_curation mRNA 20893243 20895459 . + . ID=GSCOCT00020507001;Parent=GSCOCG00020507001;Name=Cc11_g05500 | |
| 60150 chr11 manual_curation polypeptide 20893243 20895459 . + . ID=GSCOCP00020507001;Dbxref=InterPro:IPR004240,PANTHER:PTHR10766,PFAM:PF02990,SwissProt:Q54ZW0,TAIR:AT1G14670.1,TAIR:AT2G01970.1,TAIR:AT5G37310.1,TrEMBL:B9S7D0,TrEMBL:B9S7D1,TrEMBL:D7T8E1;Derives_from=GSCOCT00020507001;Name=Cc11_g05500;Ontology_term=CC_evidence_code:ISS,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Putative phagocytic receptor 1b,CC_functional_completeness:fragment,CC_gene:phg1b;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020507001~ Putative phagocytic receptor 1b~ phg1b~ fragment;original_location=join(1166033..1166219%2C1167487..1167571%2C1167687..1167787%2C1168119..1168249);owner=coffea | |
| 60151 chr11 manual_curation exon 20893243 20893429 . + . Parent=GSCOCT00020507001 | |
| 60152 chr11 manual_curation exon 20894697 20894781 . + . Parent=GSCOCT00020507001 | |
| 60153 chr11 manual_curation exon 20894897 20894997 . + . Parent=GSCOCT00020507001 | |
| 60154 chr11 manual_curation exon 20895329 20895459 . + . Parent=GSCOCT00020507001 | |
| 60155 chr11 manual_curation CDS 20893243 20893429 . + 0 Parent=GSCOCT00020507001 | |
| 60156 chr11 manual_curation CDS 20894697 20894781 . + 1 Parent=GSCOCT00020507001 | |
| 60157 chr11 manual_curation CDS 20894897 20894997 . + 2 Parent=GSCOCT00020507001 | |
| 60158 chr11 manual_curation CDS 20895329 20895459 . + 1 Parent=GSCOCT00020507001 | |
| 60159 chr11 manual_curation gene 20914785 20919700 . + . ID=GSCOCG00020509001;Name=Cc11_g05510 | |
| 60160 chr11 manual_curation mRNA 20914785 20919700 . + . ID=GSCOCT00020509001;Parent=GSCOCG00020509001;Name=Cc11_g05510 | |
| 60161 chr11 manual_curation polypeptide 20916158 20919445 . + . ID=GSCOCP00020509001;Dbxref=InterPro:IPR004240,PANTHER:PTHR10766,PFAM:PF02990,SwissProt:Q54ZW0,SwissProt:Q5R8F1,SwissProt:Q9DBU0,TAIR:AT1G14670.1,TAIR:AT2G01970.1,TAIR:AT5G37310.1,TrEMBL:B9H3J8,TrEMBL:B9S7D1,TrEMBL:D7LPY1;Derives_from=GSCOCT00020509001;Name=Cc11_g05510;Ontology_term=CC_evidence_code:ISS,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Putative phagocytic receptor 1b,CC_functional_completeness:complete,CC_gene:phg1b,CC_gene:TM9SF1,CC_gene:Tm9sf1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020509001~ Putative phagocytic receptor 1b~ phg1b~ complete;original_location=join(1188948..1189096%2C1189702..1189742%2C1189896..1190451%2C1190567..1190704%2C1190803..1190959%2C1191038..1191522%2C1192019..1192235);owner=coffea | |
| 60162 chr11 manual_curation exon 20914785 20914980 . + . Parent=GSCOCT00020509001 | |
| 60163 chr11 manual_curation exon 20916154 20916306 . + . Parent=GSCOCT00020509001 | |
| 60164 chr11 manual_curation exon 20916912 20916952 . + . Parent=GSCOCT00020509001 | |
| 60165 chr11 manual_curation exon 20917106 20917661 . + . Parent=GSCOCT00020509001 | |
| 60166 chr11 manual_curation exon 20917777 20917914 . + . Parent=GSCOCT00020509001 | |
| 60167 chr11 manual_curation exon 20918013 20918169 . + . Parent=GSCOCT00020509001 | |
| 60168 chr11 manual_curation exon 20918248 20918732 . + . Parent=GSCOCT00020509001 | |
| 60169 chr11 manual_curation exon 20919229 20919700 . + . Parent=GSCOCT00020509001 | |
| 60170 chr11 manual_curation CDS 20916158 20916306 . + 0 Parent=GSCOCT00020509001 | |
| 60171 chr11 manual_curation CDS 20916912 20916952 . + 2 Parent=GSCOCT00020509001 | |
| 60172 chr11 manual_curation CDS 20917106 20917661 . + 1 Parent=GSCOCT00020509001 | |
| 60173 chr11 manual_curation CDS 20917777 20917914 . + 2 Parent=GSCOCT00020509001 | |
| 60174 chr11 manual_curation CDS 20918013 20918169 . + 2 Parent=GSCOCT00020509001 | |
| 60175 chr11 manual_curation CDS 20918248 20918732 . + 0 Parent=GSCOCT00020509001 | |
| 60176 chr11 manual_curation CDS 20919229 20919445 . + 2 Parent=GSCOCT00020509001 | |
| 60177 chr11 manual_curation gene 20925672 20933041 . - . ID=GSCOCG00020510001;Name=Cc11_g05520 | |
| 60178 chr11 manual_curation mRNA 20925672 20933041 . - . ID=GSCOCT00020510001;Parent=GSCOCG00020510001;Name=Cc11_g05520 | |
| 60179 chr11 manual_curation polypeptide 20926310 20932914 . - . ID=GSCOCP00020510001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SMART:SM00369,SwissProt:Q8VZG8,SwissProt:Q9FZ59,SwissProt:Q9LHP4,TAIR:AT1G74180.1,TAIR:AT1G74190.1,TAIR:AT3G53240.1,TrEMBL:F6H3W3,TrEMBL:G7JP58,TrEMBL:G7ZXW0;Derives_from=GSCOCT00020510001;Name=Cc11_g05520;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:3.1.3.16,PRODUCT:Putative Receptor-like protein kinase 2,CC_functional_completeness:complete,CC_gene:RCH2,CC_gene:At4g08850,CC_gene:PEPR2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020510001~ Putative Receptor-like protein kinase 2~ RCH2~ complete;original_location=complement(join(1205323..1205704%2C1203049..1203204%2C1202422..1202502%2C1201702..1201785%2C1201426..1201484%2C1199488..1200748%2C1199100..1199200));owner=coffea | |
| 60180 chr11 manual_curation exon 20925672 20926410 . - . Parent=GSCOCT00020510001 | |
| 60181 chr11 manual_curation exon 20926698 20927958 . - . Parent=GSCOCT00020510001 | |
| 60182 chr11 manual_curation exon 20928636 20928694 . - . Parent=GSCOCT00020510001 | |
| 60183 chr11 manual_curation exon 20928912 20928995 . - . Parent=GSCOCT00020510001 | |
| 60184 chr11 manual_curation exon 20929632 20929712 . - . Parent=GSCOCT00020510001 | |
| 60185 chr11 manual_curation exon 20930259 20930414 . - . Parent=GSCOCT00020510001 | |
| 60186 chr11 manual_curation exon 20932533 20933041 . - . Parent=GSCOCT00020510001 | |
| 60187 chr11 manual_curation CDS 20926310 20926410 . - 1 Parent=GSCOCT00020510001 | |
| 60188 chr11 manual_curation CDS 20926698 20927958 . - 0 Parent=GSCOCT00020510001 | |
| 60189 chr11 manual_curation CDS 20928636 20928694 . - 1 Parent=GSCOCT00020510001 | |
| 60190 chr11 manual_curation CDS 20928912 20928995 . - 1 Parent=GSCOCT00020510001 | |
| 60191 chr11 manual_curation CDS 20929632 20929712 . - 1 Parent=GSCOCT00020510001 | |
| 60192 chr11 manual_curation CDS 20930259 20930414 . - 1 Parent=GSCOCT00020510001 | |
| 60193 chr11 manual_curation CDS 20932533 20932914 . - 0 Parent=GSCOCT00020510001 | |
| 60194 chr11 manual_curation gene 20938125 20941111 . + . ID=GSCOCG00020511001;Name=Cc11_g05530 | |
| 60195 chr11 manual_curation mRNA 20938125 20941111 . + . ID=GSCOCT00020511001;Parent=GSCOCG00020511001;Name=Cc11_g05530 | |
| 60196 chr11 manual_curation polypeptide 20938125 20941111 . + . ID=GSCOCP00020511001;Dbxref=GENE3D:G3DSA:3.40.50.200,InterPro:IPR000209,InterPro:IPR010259,InterPro:IPR015500,InterPro:IPR022398,PANTHER:PTHR10795,PFAM:PF00082,PFAM:PF05922,PRINTS:PR00723,PROSITE:PS00138,SUPERFAMILY:SSF52743,SwissProt:O65351,SwissProt:Q39547,SwissProt:Q9LLL8,TAIR:AT5G59090.1,TAIR:AT5G59100.1,TAIR:AT5G59120.1,TrEMBL:D7SKE6,TrEMBL:Q9FGU3,TrEMBL:Q9FIG2;Derives_from=GSCOCT00020511001;Name=Cc11_g05530;Ontology_term=CC_evidence_code:ISS,GO:0004252,GO:0006508,GO:0042802,GO:0043086,CC_EC_number:3.4.21.25,PRODUCT:Putative Cucumisin,CC_functional_completeness:complete,CC_gene:XSP1,CC_gene:ARA12;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020511001~ Putative Cucumisin~ XSP1~ complete;original_location=join(1210915..1210991%2C1211090..1211181%2C1211289..1211538%2C1211647..1211998%2C1212153..1212188%2C1212316..1212371%2C1212456..1212593%2C1212869..1212894%2C1212993..1213199%2C1213345..1213901);owner=coffea | |
| 60197 chr11 manual_curation exon 20938125 20938201 . + . Parent=GSCOCT00020511001 | |
| 60198 chr11 manual_curation exon 20938300 20938391 . + . Parent=GSCOCT00020511001 | |
| 60199 chr11 manual_curation exon 20938499 20938748 . + . Parent=GSCOCT00020511001 | |
| 60200 chr11 manual_curation exon 20938857 20939208 . + . Parent=GSCOCT00020511001 | |
| 60201 chr11 manual_curation exon 20939363 20939398 . + . Parent=GSCOCT00020511001 | |
| 60202 chr11 manual_curation exon 20939526 20939581 . + . Parent=GSCOCT00020511001 | |
| 60203 chr11 manual_curation exon 20939666 20939803 . + . Parent=GSCOCT00020511001 | |
| 60204 chr11 manual_curation exon 20940079 20940104 . + . Parent=GSCOCT00020511001 | |
| 60205 chr11 manual_curation exon 20940203 20940409 . + . Parent=GSCOCT00020511001 | |
| 60206 chr11 manual_curation exon 20940555 20941111 . + . Parent=GSCOCT00020511001 | |
| 60207 chr11 manual_curation CDS 20938125 20938201 . + 0 Parent=GSCOCT00020511001 | |
| 60208 chr11 manual_curation CDS 20938300 20938391 . + 2 Parent=GSCOCT00020511001 | |
| 60209 chr11 manual_curation CDS 20938499 20938748 . + 1 Parent=GSCOCT00020511001 | |
| 60210 chr11 manual_curation CDS 20938857 20939208 . + 2 Parent=GSCOCT00020511001 | |
| 60211 chr11 manual_curation CDS 20939363 20939398 . + 0 Parent=GSCOCT00020511001 | |
| 60212 chr11 manual_curation CDS 20939526 20939581 . + 0 Parent=GSCOCT00020511001 | |
| 60213 chr11 manual_curation CDS 20939666 20939803 . + 2 Parent=GSCOCT00020511001 | |
| 60214 chr11 manual_curation CDS 20940079 20940104 . + 2 Parent=GSCOCT00020511001 | |
| 60215 chr11 manual_curation CDS 20940203 20940409 . + 1 Parent=GSCOCT00020511001 | |
| 60216 chr11 manual_curation CDS 20940555 20941111 . + 1 Parent=GSCOCT00020511001 | |
| 60217 chr11 manual_curation gene 20958449 20961584 . + . ID=GSCOCG00020512001;Name=Cc11_g05540 | |
| 60218 chr11 manual_curation mRNA 20958449 20961584 . + . ID=GSCOCT00020512001;Parent=GSCOCG00020512001;Name=Cc11_g05540 | |
| 60219 chr11 manual_curation polypeptide 20958449 20961584 . + . ID=GSCOCP00020512001;Dbxref=GENE3D:G3DSA:3.40.50.200,InterPro:IPR000209,InterPro:IPR010259,InterPro:IPR015500,InterPro:IPR022398,PANTHER:PTHR10795,PFAM:PF00082,PFAM:PF05922,PRINTS:PR00723,PROSITE:PS00138,SUPERFAMILY:SSF52743,SwissProt:O65351,SwissProt:Q39547,SwissProt:Q9LLL8,TAIR:AT3G46850.1,TAIR:AT5G59100.1,TAIR:AT5G59120.1,TrEMBL:B9HPB8,TrEMBL:D7SKE6,TrEMBL:F6GUX0;Derives_from=GSCOCT00020512001;Name=Cc11_g05540;Ontology_term=CC_evidence_code:ISS,GO:0004252,GO:0006508,GO:0042802,GO:0043086,CC_EC_number:3.4.21.25,PRODUCT:Putative Cucumisin,CC_functional_completeness:complete,CC_gene:XSP1,CC_gene:ARA12;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020512001~ Putative Cucumisin~ XSP1~ complete;original_location=join(1231239..1231315%2C1231418..1231509%2C1231609..1231858%2C1231964..1232456%2C1232634..1232728%2C1232812..1233030%2C1233125..1233236%2C1233520..1233733%2C1233815..1234374);owner=coffea | |
| 60220 chr11 manual_curation exon 20958449 20958525 . + . Parent=GSCOCT00020512001 | |
| 60221 chr11 manual_curation exon 20958628 20958719 . + . Parent=GSCOCT00020512001 | |
| 60222 chr11 manual_curation exon 20958819 20959068 . + . Parent=GSCOCT00020512001 | |
| 60223 chr11 manual_curation exon 20959174 20959666 . + . Parent=GSCOCT00020512001 | |
| 60224 chr11 manual_curation exon 20959844 20959938 . + . Parent=GSCOCT00020512001 | |
| 60225 chr11 manual_curation exon 20960022 20960240 . + . Parent=GSCOCT00020512001 | |
| 60226 chr11 manual_curation exon 20960335 20960446 . + . Parent=GSCOCT00020512001 | |
| 60227 chr11 manual_curation exon 20960730 20960943 . + . Parent=GSCOCT00020512001 | |
| 60228 chr11 manual_curation exon 20961025 20961584 . + . Parent=GSCOCT00020512001 | |
| 60229 chr11 manual_curation CDS 20958449 20958525 . + 0 Parent=GSCOCT00020512001 | |
| 60230 chr11 manual_curation CDS 20958628 20958719 . + 2 Parent=GSCOCT00020512001 | |
| 60231 chr11 manual_curation CDS 20958819 20959068 . + 1 Parent=GSCOCT00020512001 | |
| 60232 chr11 manual_curation CDS 20959174 20959666 . + 2 Parent=GSCOCT00020512001 | |
| 60233 chr11 manual_curation CDS 20959844 20959938 . + 0 Parent=GSCOCT00020512001 | |
| 60234 chr11 manual_curation CDS 20960022 20960240 . + 2 Parent=GSCOCT00020512001 | |
| 60235 chr11 manual_curation CDS 20960335 20960446 . + 2 Parent=GSCOCT00020512001 | |
| 60236 chr11 manual_curation CDS 20960730 20960943 . + 0 Parent=GSCOCT00020512001 | |
| 60237 chr11 manual_curation CDS 20961025 20961584 . + 1 Parent=GSCOCT00020512001 | |
| 60238 chr11 manual_curation gene 20967143 20971114 . + . ID=GSCOCG00020513001;Name=Cc11_g05550 | |
| 60239 chr11 manual_curation mRNA 20967143 20971114 . + . ID=GSCOCT00020513001;Parent=GSCOCG00020513001;Name=Cc11_g05550 | |
| 60240 chr11 manual_curation polypeptide 20967143 20971114 . + . ID=GSCOCP00020513001;Dbxref=InterPro:IPR004240,PANTHER:PTHR10766,PFAM:PF02990,SwissProt:A4IFE9,SwissProt:Q54ZW0,SwissProt:Q9DBU0,TAIR:AT1G14670.1,TAIR:AT2G01970.1,TAIR:AT5G37310.1,TrEMBL:D7LPY1,TrEMBL:D7T8E1,TrEMBL:I1K3B1;Derives_from=GSCOCT00020513001;Name=Cc11_g05550;Ontology_term=CC_evidence_code:ISS,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Putative phagocytic receptor 1b,CC_functional_completeness:complete,CC_gene:phg1b,CC_gene:Tm9sf1,CC_gene:TM9SF1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020513001~ Putative phagocytic receptor 1b~ phg1b~ complete;original_location=join(1239933..1240078%2C1240243..1240283%2C1241116..1241698%2C1241849..1241986%2C1242086..1242296%2C1242389..1242873%2C1243685..1243904);owner=coffea | |
| 60241 chr11 manual_curation exon 20967143 20967288 . + . Parent=GSCOCT00020513001 | |
| 60242 chr11 manual_curation exon 20967453 20967493 . + . Parent=GSCOCT00020513001 | |
| 60243 chr11 manual_curation exon 20968326 20968908 . + . Parent=GSCOCT00020513001 | |
| 60244 chr11 manual_curation exon 20969059 20969196 . + . Parent=GSCOCT00020513001 | |
| 60245 chr11 manual_curation exon 20969296 20969506 . + . Parent=GSCOCT00020513001 | |
| 60246 chr11 manual_curation exon 20969599 20970083 . + . Parent=GSCOCT00020513001 | |
| 60247 chr11 manual_curation exon 20970895 20971114 . + . Parent=GSCOCT00020513001 | |
| 60248 chr11 manual_curation CDS 20967143 20967288 . + 0 Parent=GSCOCT00020513001 | |
| 60249 chr11 manual_curation CDS 20967453 20967493 . + 2 Parent=GSCOCT00020513001 | |
| 60250 chr11 manual_curation CDS 20968326 20968908 . + 1 Parent=GSCOCT00020513001 | |
| 60251 chr11 manual_curation CDS 20969059 20969196 . + 2 Parent=GSCOCT00020513001 | |
| 60252 chr11 manual_curation CDS 20969296 20969506 . + 2 Parent=GSCOCT00020513001 | |
| 60253 chr11 manual_curation CDS 20969599 20970083 . + 0 Parent=GSCOCT00020513001 | |
| 60254 chr11 manual_curation CDS 20970895 20971114 . + 2 Parent=GSCOCT00020513001 | |
| 60255 chr11 manual_curation gene 20980614 20981288 . - . ID=GSCOCG00020514001;Name=Cc11_g05560 | |
| 60256 chr11 manual_curation mRNA 20980614 20981288 . - . ID=GSCOCT00020514001;Parent=GSCOCG00020514001;Name=Cc11_g05560 | |
| 60257 chr11 manual_curation polypeptide 20980614 20981288 . - . ID=GSCOCP00020514001;Dbxref=InterPro:IPR002100,PFAM:PF00319,PRINTS:PR00404,PROFILE:PS50066,SMART:SM00432,SUPERFAMILY:SSF55455,SwissProt:O80805,SwissProt:Q7XJK8,SwissProt:Q9FJK3,TAIR:AT1G65300.1,TAIR:AT1G65330.1,TAIR:AT5G48670.1,TrEMBL:B6DT62,TrEMBL:B9N410,TrEMBL:D7UAA8;Derives_from=GSCOCT00020514001;Name=Cc11_g05560;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0005634,GO:0043565,CC_EC_number:missing_EC_number,PRODUCT:Putative MADS-box transcription factor PHERES 1,CC_functional_completeness:fragment,CC_gene:AGL80,CC_gene:PHE1,CC_gene:PHE2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020514001~ Putative MADS-box transcription factor PHERES 1~ AGL80~ fragment;original_location=complement(1253404..1254078);owner=coffea | |
| 60258 chr11 manual_curation exon 20980614 20981288 . - . Parent=GSCOCT00020514001 | |
| 60259 chr11 manual_curation CDS 20980614 20981288 . - 0 Parent=GSCOCT00020514001 | |
| 60260 chr11 manual_curation gene 20991982 20993679 . - . ID=GSCOCG00020515001;Name=Cc11_g05570 | |
| 60261 chr11 manual_curation mRNA 20991982 20993679 . - . ID=GSCOCT00020515001;Parent=GSCOCG00020515001;Name=Cc11_g05570 | |
| 60262 chr11 manual_curation polypeptide 20991982 20993679 . - . ID=GSCOCP00020515001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,SwissProt:Q9LMF1,SwissProt:Q9M9E7,SwissProt:Q9SGA8,TAIR:AT1G22380.1,TAIR:AT1G78270.1,TAIR:AT3G02100.1,TrEMBL:B9H0D2,TrEMBL:B9IK54,TrEMBL:F6H3Z9;Derives_from=GSCOCT00020515001;Name=Cc11_g05570;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:Putative UDP-glycosyltransferase 83A1,CC_functional_completeness:complete,CC_gene:UGT83A1,CC_gene:UGT85A3,CC_gene:UGT85A4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020515001~ Putative UDP-glycosyltransferase 83A1~ UGT83A1~ complete;original_location=complement(join(1265989..1266469%2C1264772..1265658));owner=coffea | |
| 60263 chr11 manual_curation exon 20991982 20992868 . - . Parent=GSCOCT00020515001 | |
| 60264 chr11 manual_curation exon 20993199 20993679 . - . Parent=GSCOCT00020515001 | |
| 60265 chr11 manual_curation CDS 20991982 20992868 . - 1 Parent=GSCOCT00020515001 | |
| 60266 chr11 manual_curation CDS 20993199 20993679 . - 0 Parent=GSCOCT00020515001 | |
| 60267 chr11 manual_curation gene 21017137 21018453 . - . ID=GSCOCG00020516001;Name=Cc11_g05580 | |
| 60268 chr11 manual_curation mRNA 21017137 21018453 . - . ID=GSCOCT00020516001;Parent=GSCOCG00020516001;Name=Cc11_g05580 | |
| 60269 chr11 manual_curation polypeptide 21017137 21018453 . - . ID=GSCOCP00020516001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,SwissProt:Q8W2B7,SwissProt:Q9LMF1,SwissProt:Q9SGA8,TAIR:AT1G22380.1,TAIR:AT3G02100.1,TAIR:AT3G11340.1,TrEMBL:B9H0D2,TrEMBL:B9IK54,TrEMBL:F6H3Z9;Derives_from=GSCOCT00020516001;Name=Cc11_g05580;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:Putative UDP-glycosyltransferase 83A1,CC_functional_completeness:fragment,CC_gene:UGT83A1,CC_gene:UGT85A3,CC_gene:Bx8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020516001~ Putative UDP-glycosyltransferase 83A1~ UGT83A1~ fragment;original_location=complement(join(1291141..1291243%2C1289927..1290813));owner=coffea | |
| 60270 chr11 manual_curation exon 21017137 21018023 . - . Parent=GSCOCT00020516001 | |
| 60271 chr11 manual_curation exon 21018351 21018453 . - . Parent=GSCOCT00020516001 | |
| 60272 chr11 manual_curation CDS 21017137 21018023 . - 1 Parent=GSCOCT00020516001 | |
| 60273 chr11 manual_curation CDS 21018351 21018453 . - 0 Parent=GSCOCT00020516001 | |
| 60274 chr11 manual_curation gene 21025905 21035529 . + . ID=GSCOCG00020517001;Name=Cc11_g05590 | |
| 60275 chr11 manual_curation mRNA 21025905 21035529 . + . ID=GSCOCT00020517001;Parent=GSCOCG00020517001;Name=Cc11_g05590 | |
| 60276 chr11 manual_curation polypeptide 21026205 21035529 . + . ID=GSCOCP00020517001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,PFAM:PF00560,SMART:SM00369,SwissProt:C0LGQ5,SwissProt:Q9SHI2,SwissProt:Q9ZWC8,TAIR:AT1G58190.2,TAIR:AT1G74190.1,TAIR:AT2G25470.1,TrEMBL:G7JP53,TrEMBL:G7JP58,TrEMBL:G7ZXW0;Derives_from=GSCOCT00020517001;Name=Cc11_g05590;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:3.1.3.16,PRODUCT:Putative LRR receptor-like serine/threonine-protein kinase GSO1,CC_functional_completeness:complete,CC_gene:GSO1,CC_gene:At1g17230,CC_gene:BRL1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020517001~ Putative LRR receptor-like serine/threonine-protein kinase GSO1~ GSO1~ complete;original_location=join(1298995..1299124%2C1301539..1301694%2C1302762..1302836%2C1304342..1304479%2C1304701..1306915%2C1307818..1308319);owner=coffea | |
| 60277 chr11 manual_curation exon 21025905 21026334 . + . Parent=GSCOCT00020517001 | |
| 60278 chr11 manual_curation exon 21028749 21028904 . + . Parent=GSCOCT00020517001 | |
| 60279 chr11 manual_curation exon 21029972 21030046 . + . Parent=GSCOCT00020517001 | |
| 60280 chr11 manual_curation exon 21031552 21031689 . + . Parent=GSCOCT00020517001 | |
| 60281 chr11 manual_curation exon 21031911 21034125 . + . Parent=GSCOCT00020517001 | |
| 60282 chr11 manual_curation exon 21035028 21035529 . + . Parent=GSCOCT00020517001 | |
| 60283 chr11 manual_curation CDS 21026205 21026334 . + 0 Parent=GSCOCT00020517001 | |
| 60284 chr11 manual_curation CDS 21028749 21028904 . + 1 Parent=GSCOCT00020517001 | |
| 60285 chr11 manual_curation CDS 21029972 21030046 . + 1 Parent=GSCOCT00020517001 | |
| 60286 chr11 manual_curation CDS 21031552 21031689 . + 1 Parent=GSCOCT00020517001 | |
| 60287 chr11 manual_curation CDS 21031911 21034125 . + 1 Parent=GSCOCT00020517001 | |
| 60288 chr11 manual_curation CDS 21035028 21035529 . + 2 Parent=GSCOCT00020517001 | |
| 60289 chr11 manual_curation gene 21045027 21048843 . - . ID=GSCOCG00020519001;Name=Cc11_g05600 | |
| 60290 chr11 manual_curation mRNA 21045027 21048843 . - . ID=GSCOCT00020519001;Parent=GSCOCG00020519001;Name=Cc11_g05600 | |
| 60291 chr11 manual_curation polypeptide 21045303 21048635 . - . ID=GSCOCP00020519001;Dbxref=InterPro:IPR021640,PFAM:PF11594,TAIR:AT1G67790.1,TAIR:AT3G01670.1,TAIR:AT3G01680.1,TrEMBL:D7SME4,TrEMBL:E2FKJ9,TrEMBL:E2FKK0;Derives_from=GSCOCT00020519001;Name=Cc11_g05600;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative CONTAINS InterPro DOMAIN/s,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020519001~ Putative CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640)%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01670.1)%3B Has 122 Blast hits to 112 proteins in 13 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 122%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(1321303..1321425%2C1321054..1321161%2C1320376..1320818%2C1319713..1319822%2C1319447..1319589%2C1318868..1319344%2C1318093..1318710));owner=coffea | |
| 60292 chr11 manual_curation exon 21045027 21045920 . - . Parent=GSCOCT00020519001 | |
| 60293 chr11 manual_curation exon 21046078 21046554 . - . Parent=GSCOCT00020519001 | |
| 60294 chr11 manual_curation exon 21046657 21046799 . - . Parent=GSCOCT00020519001 | |
| 60295 chr11 manual_curation exon 21046923 21047032 . - . Parent=GSCOCT00020519001 | |
| 60296 chr11 manual_curation exon 21047586 21048028 . - . Parent=GSCOCT00020519001 | |
| 60297 chr11 manual_curation exon 21048264 21048371 . - . Parent=GSCOCT00020519001 | |
| 60298 chr11 manual_curation exon 21048513 21048843 . - . Parent=GSCOCT00020519001 | |
| 60299 chr11 manual_curation CDS 21045303 21045920 . - 0 Parent=GSCOCT00020519001 | |
| 60300 chr11 manual_curation CDS 21046078 21046554 . - 0 Parent=GSCOCT00020519001 | |
| 60301 chr11 manual_curation CDS 21046657 21046799 . - 1 Parent=GSCOCT00020519001 | |
| 60302 chr11 manual_curation CDS 21046923 21047032 . - 2 Parent=GSCOCT00020519001 | |
| 60303 chr11 manual_curation CDS 21047586 21048028 . - 0 Parent=GSCOCT00020519001 | |
| 60304 chr11 manual_curation CDS 21048264 21048371 . - 0 Parent=GSCOCT00020519001 | |
| 60305 chr11 manual_curation CDS 21048513 21048635 . - 0 Parent=GSCOCT00020519001 | |
| 60306 chr11 manual_curation gene 21057070 21059138 . - . ID=GSCOCG00020521001;Name=Cc11_g05610 | |
| 60307 chr11 manual_curation mRNA 21057070 21059138 . - . ID=GSCOCT00020521001;Parent=GSCOCG00020521001;Name=Cc11_g05610 | |
| 60308 chr11 manual_curation polypeptide 21057070 21059082 . - . ID=GSCOCP00020521001;Dbxref=GENE3D:G3DSA:3.20.20.100,InterPro:IPR001395,InterPro:IPR018170,InterPro:IPR020471,PANTHER:PTHR11732,PFAM:PF00248,PRINTS:PR00069,PROSITE:PS00062,PROSITE:PS00063,PROSITE:PS00798,SUPERFAMILY:SSF51430,SwissProt:P26690,SwissProt:Q7G764,SwissProt:Q7G765,TAIR:AT1G59950.1,TAIR:AT1G59960.1,TAIR:AT2G37790.1,TrEMBL:A1Y2Z0,TrEMBL:A5BF25,TrEMBL:D7T8E4;Derives_from=GSCOCT00020521001;Name=Cc11_g05610;Ontology_term=CC_evidence_code:ISS,GO:0016491,GO:0055114,CC_EC_number:2.3.1.170,PRODUCT:NAD(P)H-dependent 6'-deoxychalcone synthase,CC_functional_completeness:complete,CC_gene:Os10g0113000,CC_gene:Os10g0113100;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020521001~ NAD(P)H-dependent 6'-deoxychalcone synthase~ Os10g0113000~ complete;original_location=complement(join(1331559..1331872%2C1331057..1331300%2C1330770..1330949%2C1329860..1330072));owner=coffea | |
| 60309 chr11 manual_curation exon 21057070 21057282 . - . Parent=GSCOCT00020521001 | |
| 60310 chr11 manual_curation exon 21057980 21058159 . - . Parent=GSCOCT00020521001 | |
| 60311 chr11 manual_curation exon 21058267 21058510 . - . Parent=GSCOCT00020521001 | |
| 60312 chr11 manual_curation exon 21058769 21059138 . - . Parent=GSCOCT00020521001 | |
| 60313 chr11 manual_curation CDS 21057070 21057282 . - 0 Parent=GSCOCT00020521001 | |
| 60314 chr11 manual_curation CDS 21057980 21058159 . - 0 Parent=GSCOCT00020521001 | |
| 60315 chr11 manual_curation CDS 21058267 21058510 . - 2 Parent=GSCOCT00020521001 | |
| 60316 chr11 manual_curation CDS 21058769 21059082 . - 0 Parent=GSCOCT00020521001 | |
| 60317 chr11 manual_curation gene 21086551 21089937 . + . ID=GSCOCG00020525001;Name=Cc11_g05620 | |
| 60318 chr11 manual_curation mRNA 21086551 21089937 . + . ID=GSCOCT00020525001;Parent=GSCOCG00020525001;Name=Cc11_g05620 | |
| 60319 chr11 manual_curation polypeptide 21086551 21089937 . + . ID=GSCOCP00020525001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:Q9LJF3,SwissProt:Q9ZPS9,SwissProt:Q9ZWC8,TAIR:AT1G55610.1,TAIR:AT2G01950.1,TAIR:AT3G13380.1,TrEMBL:B9HJL5,TrEMBL:B9S7D4,TrEMBL:F6HFA2;Derives_from=GSCOCT00020525001;Name=Cc11_g05620;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Serine/threonine-protein kinase BRI1-like 2,CC_functional_completeness:complete,CC_gene:BRL2,CC_gene:BRL1,CC_gene:BRL3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020525001~ Serine/threonine-protein kinase BRI1-like 2~ BRL2~ complete;original_location=1359341..1362727;owner=coffea | |
| 60320 chr11 manual_curation exon 21086551 21089937 . + . Parent=GSCOCT00020525001 | |
| 60321 chr11 manual_curation CDS 21086551 21089937 . + 0 Parent=GSCOCT00020525001 | |
| 60322 chr11 manual_curation gene 21118997 21121686 . + . ID=GSCOCG00020527001;Name=Cc11_g05630 | |
| 60323 chr11 manual_curation mRNA 21118997 21121686 . + . ID=GSCOCT00020527001;Parent=GSCOCG00020527001;Name=Cc11_g05630 | |
| 60324 chr11 manual_curation polypeptide 21119295 21121329 . + . ID=GSCOCP00020527001;Dbxref=InterPro:IPR007087,InterPro:IPR015880,InterPro:IPR019786,PROFILE:PS50157,PROSITE:PS00028,PROSITE:PS01359,SMART:SM00355,SwissProt:Q700D2,SwissProt:Q9FFH3,SwissProt:Q9ZWA6,TAIR:AT1G25250.1,TAIR:AT1G68130.1,TAIR:AT2G01940.3,TrEMBL:A5ADE6,TrEMBL:A9PFF0,TrEMBL:B9HJL4;Derives_from=GSCOCT00020527001;Name=Cc11_g05630;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:indeterminate(ID)-domain 14,CC_functional_completeness:complete,CC_gene:MGP,CC_gene:JKD,CC_gene:NUC;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020527001~ indeterminate(ID)-domain 14~ MGP~ complete;original_location=join(1392085..1392205%2C1392363..1392762%2C1393369..1393679%2C1393767..1394119);owner=coffea | |
| 60325 chr11 manual_curation exon 21118997 21119415 . + . Parent=GSCOCT00020527001 | |
| 60326 chr11 manual_curation exon 21119573 21119972 . + . Parent=GSCOCT00020527001 | |
| 60327 chr11 manual_curation exon 21120579 21120889 . + . Parent=GSCOCT00020527001 | |
| 60328 chr11 manual_curation exon 21120977 21121686 . + . Parent=GSCOCT00020527001 | |
| 60329 chr11 manual_curation CDS 21119295 21119415 . + 0 Parent=GSCOCT00020527001 | |
| 60330 chr11 manual_curation CDS 21119573 21119972 . + 1 Parent=GSCOCT00020527001 | |
| 60331 chr11 manual_curation CDS 21120579 21120889 . + 2 Parent=GSCOCT00020527001 | |
| 60332 chr11 manual_curation CDS 21120977 21121329 . + 1 Parent=GSCOCT00020527001 | |
| 60333 chr11 manual_curation gene 21131767 21135145 . - . ID=GSCOCG00020528001;Name=Cc11_g05640 | |
| 60334 chr11 manual_curation mRNA 21131767 21135145 . - . ID=GSCOCT00020528001;Parent=GSCOCG00020528001;Name=Cc11_g05640 | |
| 60335 chr11 manual_curation polypeptide 21131767 21135145 . - . ID=GSCOCP00020528001;Dbxref=InterPro:IPR001965,InterPro:IPR011011,InterPro:IPR019786,PROSITE:PS01359,SMART:SM00249,SUPERFAMILY:SSF57903,SwissProt:Q7X6Y7,SwissProt:Q9C810,SwissProt:Q9FMS5,TAIR:AT1G33420.1,TAIR:AT1G66170.1,TAIR:AT5G22260.1,TrEMBL:B9HVQ6,TrEMBL:B9S7E3,TrEMBL:D7T8F2;Derives_from=GSCOCT00020528001;Name=Cc11_g05640;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative PHD finger protein MALE STERILITY 1,CC_functional_completeness:complete,CC_gene:MS1,CC_gene:MMD1,CC_gene:At1g33420;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020528001~ Putative PHD finger protein MALE STERILITY 1~ MS1~ complete;original_location=complement(join(1407641..1407935%2C1406431..1406728%2C1404557..1405937));owner=coffea | |
| 60336 chr11 manual_curation exon 21131767 21133147 . - . Parent=GSCOCT00020528001 | |
| 60337 chr11 manual_curation exon 21133641 21133938 . - . Parent=GSCOCT00020528001 | |
| 60338 chr11 manual_curation exon 21134851 21135145 . - . Parent=GSCOCT00020528001 | |
| 60339 chr11 manual_curation CDS 21131767 21133147 . - 2 Parent=GSCOCT00020528001 | |
| 60340 chr11 manual_curation CDS 21133641 21133938 . - 1 Parent=GSCOCT00020528001 | |
| 60341 chr11 manual_curation CDS 21134851 21135145 . - 0 Parent=GSCOCT00020528001 | |
| 60342 chr11 manual_curation gene 21150884 21153402 . + . ID=GSCOCG00020529001;Name=Cc11_g05650 | |
| 60343 chr11 manual_curation mRNA 21150884 21153402 . + . ID=GSCOCT00020529001;Parent=GSCOCG00020529001;Name=Cc11_g05650 | |
| 60344 chr11 manual_curation polypeptide 21152083 21152931 . + . ID=GSCOCP00020529001;Dbxref=InterPro:IPR010409,PFAM:PF06217,SwissProt:Q9C9X6,SwissProt:Q9LDE2,SwissProt:Q9SKD0,TAIR:AT1G14685.3,TAIR:AT1G68120.1,TAIR:AT2G01930.1,TrEMBL:A5AP61,TrEMBL:F6HFA4,TrEMBL:H1ZN83;Derives_from=GSCOCT00020529001;Name=Cc11_g05650;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein BASIC PENTACYSTEINE1,CC_functional_completeness:complete,CC_gene:BPC1,CC_gene:BPC2,CC_gene:BPC3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020529001~ Protein BASIC PENTACYSTEINE1~ BPC1~ complete;original_location=1424873..1425721;owner=coffea | |
| 60345 chr11 manual_curation exon 21150884 21153402 . + . Parent=GSCOCT00020529001 | |
| 60346 chr11 manual_curation CDS 21152083 21152931 . + 0 Parent=GSCOCT00020529001 | |
| 60347 chr11 manual_curation gene 21155336 21155998 . + . ID=GSCOCG00020530001;Name=Cc11_g05660 | |
| 60348 chr11 manual_curation mRNA 21155336 21155998 . + . ID=GSCOCT00020530001;Parent=GSCOCG00020530001;Name=Cc11_g05660 | |
| 60349 chr11 manual_curation polypeptide 21155336 21155587 . + . ID=GSCOCP00020530001;Derives_from=GSCOCT00020530001;Name=Cc11_g05660;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020530001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1428126..1428377;owner=coffea | |
| 60350 chr11 manual_curation exon 21155336 21155998 . + . Parent=GSCOCT00020530001 | |
| 60351 chr11 manual_curation CDS 21155336 21155587 . + 0 Parent=GSCOCT00020530001 | |
| 60352 chr11 manual_curation gene 21157266 21158450 . - . ID=GSCOCG00020531001;Name=Cc11_g05670 | |
| 60353 chr11 manual_curation mRNA 21157266 21158450 . - . ID=GSCOCT00020531001;Parent=GSCOCG00020531001;Name=Cc11_g05670 | |
| 60354 chr11 manual_curation polypeptide 21157266 21158450 . - . ID=GSCOCP00020531001;Dbxref=GENE3D:G3DSA:1.20.58.150,GENE3D:G3DSA:1.25.40.90,InterPro:IPR008942,InterPro:IPR011417,InterPro:IPR013809,InterPro:IPR014712,PFAM:PF07651,PROFILE:PS50942,SUPERFAMILY:SSF48464,SwissProt:Q9C9X5,SwissProt:Q9FRH3,SwissProt:Q9LQW4,TAIR:AT1G14686.1,TAIR:AT1G25240.1,TAIR:AT1G68110.1,TrEMBL:B9HJL1,TrEMBL:B9S7D9,TrEMBL:D7T8F4;Derives_from=GSCOCT00020531001;Name=Cc11_g05670;Ontology_term=CC_evidence_code:ISS,GO:0005543,GO:0005545,GO:0030118,GO:0030276,GO:0048268,CC_EC_number:missing_EC_number,PRODUCT:Putative clathrin assembly protein At1g25240,CC_functional_completeness:complete,CC_gene:At1g25240,CC_gene:At1g68110,CC_gene:At1g14686;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020531001~ Putative clathrin assembly protein At1g25240~ At1g25240~ complete;original_location=complement(1430056..1431240);owner=coffea | |
| 60355 chr11 manual_curation exon 21157266 21158450 . - . Parent=GSCOCT00020531001 | |
| 60356 chr11 manual_curation CDS 21157266 21158450 . - 0 Parent=GSCOCT00020531001 | |
| 60357 chr11 manual_curation gene 21160378 21164235 . + . ID=GSCOCG00020533001;Name=Cc11_g05680 | |
| 60358 chr11 manual_curation mRNA 21160378 21164235 . + . ID=GSCOCT00020533001;Parent=GSCOCG00020533001;Name=Cc11_g05680 | |
| 60359 chr11 manual_curation polypeptide 21162182 21163350 . + . ID=GSCOCP00020533001;Dbxref=InterPro:IPR001748,InterPro:IPR018230,PANTHER:PTHR19411,PFAM:PF01125,PRINTS:PR00322,PROSITE:PS00997,PROSITE:PS00998,SwissProt:P35682,SwissProt:Q65WT0,SwissProt:Q94DE2,TAIR:AT4G21110.1,TrEMBL:B9T6Y0,TrEMBL:C6SVT6,TrEMBL:F6HDF6;Derives_from=GSCOCT00020533001;Name=Cc11_g05680;Ontology_term=CC_evidence_code:ISS,GO:0005634,CC_EC_number:missing_EC_number,PRODUCT:Protein BUD31 homolog 2,CC_functional_completeness:complete,CC_gene:Os05g0446300,CC_gene:Os01g0857700,CC_gene:Os12g0149800;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020533001~ Protein BUD31 homolog 2~ Os05g0446300~ complete;original_location=join(1434972..1435065%2C1435171..1435358%2C1435985..1436140);owner=coffea | |
| 60360 chr11 manual_curation exon 21160378 21160462 . + . Parent=GSCOCT00020533001 | |
| 60361 chr11 manual_curation exon 21162157 21162275 . + . Parent=GSCOCT00020533001 | |
| 60362 chr11 manual_curation exon 21162381 21162568 . + . Parent=GSCOCT00020533001 | |
| 60363 chr11 manual_curation exon 21163195 21164235 . + . Parent=GSCOCT00020533001 | |
| 60364 chr11 manual_curation CDS 21162182 21162275 . + 0 Parent=GSCOCT00020533001 | |
| 60365 chr11 manual_curation CDS 21162381 21162568 . + 1 Parent=GSCOCT00020533001 | |
| 60366 chr11 manual_curation CDS 21163195 21163350 . + 0 Parent=GSCOCT00020533001 | |
| 60367 chr11 manual_curation gene 21165645 21167521 . - . ID=GSCOCG00020534001;Name=Cc11_g05690 | |
| 60368 chr11 manual_curation mRNA 21165645 21167521 . - . ID=GSCOCT00020534001;Parent=GSCOCG00020534001;Name=Cc11_g05690 | |
| 60369 chr11 manual_curation polypeptide 21165825 21167521 . - . ID=GSCOCP00020534001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,SwissProt:Q8W2B7,SwissProt:Q9LMF1,SwissProt:Q9SGA8,TAIR:AT1G22380.1,TAIR:AT3G02100.1,TAIR:AT3G22250.1,TrEMBL:B9H0D2,TrEMBL:B9IK54,TrEMBL:F6H3Z9;Derives_from=GSCOCT00020534001;Name=Cc11_g05690;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:Putative UDP-glycosyltransferase 83A1,CC_functional_completeness:complete,CC_gene:UGT83A1,CC_gene:UGT85A3,CC_gene:Bx8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020534001~ Putative UDP-glycosyltransferase 83A1~ UGT83A1~ complete;original_location=complement(join(1440221..1440311%2C1439831..1440091%2C1438615..1439501));owner=coffea | |
| 60370 chr11 manual_curation exon 21165645 21166711 . - . Parent=GSCOCT00020534001 | |
| 60371 chr11 manual_curation exon 21167041 21167301 . - . Parent=GSCOCT00020534001 | |
| 60372 chr11 manual_curation exon 21167431 21167521 . - . Parent=GSCOCT00020534001 | |
| 60373 chr11 manual_curation CDS 21165825 21166711 . - 1 Parent=GSCOCT00020534001 | |
| 60374 chr11 manual_curation CDS 21167041 21167301 . - 1 Parent=GSCOCT00020534001 | |
| 60375 chr11 manual_curation CDS 21167431 21167521 . - 0 Parent=GSCOCT00020534001 | |
| 60376 chr11 manual_curation gene 21214149 21225006 . - . ID=GSCOCG00020538001;Name=Cc11_g05700 | |
| 60377 chr11 manual_curation mRNA 21214149 21225006 . - . ID=GSCOCT00020538001;Parent=GSCOCG00020538001;Name=Cc11_g05700 | |
| 60378 chr11 manual_curation polypeptide 21214433 21224372 . - . ID=GSCOCP00020538001;Dbxref=InterPro:IPR003689,PFAM:PF02535,SwissProt:Q31125,SwissProt:Q5TJF6,SwissProt:Q9M647,TAIR:AT1G68100.1,TrEMBL:B9HJK9,TrEMBL:B9S7E2,TrEMBL:D7T8F6;Derives_from=GSCOCT00020538001;Name=Cc11_g05700;Ontology_term=CC_evidence_code:ISS,GO:0016020,GO:0030001,GO:0046873,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:IAA-alanine resistance protein 1,CC_functional_completeness:complete,CC_gene:IAR1,CC_gene:Slc39a7,CC_gene:SLC39A7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020538001~ IAA-alanine resistance protein 1~ IAR1~ complete;original_location=complement(join(1496784..1497162%2C1493861..1493944%2C1493713..1493762%2C1493082..1493133%2C1491119..1491247%2C1489768..1490048%2C1488864..1489040%2C1488606..1488713%2C1487651..1487752%2C1487463..1487507%2C1487223..1487375));owner=coffea | |
| 60379 chr11 manual_curation exon 21214149 21214585 . - . Parent=GSCOCT00020538001 | |
| 60380 chr11 manual_curation exon 21214673 21214717 . - . Parent=GSCOCT00020538001 | |
| 60381 chr11 manual_curation exon 21214861 21214962 . - . Parent=GSCOCT00020538001 | |
| 60382 chr11 manual_curation exon 21215816 21215923 . - . Parent=GSCOCT00020538001 | |
| 60383 chr11 manual_curation exon 21216074 21216250 . - . Parent=GSCOCT00020538001 | |
| 60384 chr11 manual_curation exon 21216978 21217258 . - . Parent=GSCOCT00020538001 | |
| 60385 chr11 manual_curation exon 21218329 21218457 . - . Parent=GSCOCT00020538001 | |
| 60386 chr11 manual_curation exon 21220292 21220343 . - . Parent=GSCOCT00020538001 | |
| 60387 chr11 manual_curation exon 21220923 21220972 . - . Parent=GSCOCT00020538001 | |
| 60388 chr11 manual_curation exon 21221071 21221154 . - . Parent=GSCOCT00020538001 | |
| 60389 chr11 manual_curation exon 21223994 21225006 . - . Parent=GSCOCT00020538001 | |
| 60390 chr11 manual_curation CDS 21214433 21214585 . - 0 Parent=GSCOCT00020538001 | |
| 60391 chr11 manual_curation CDS 21214673 21214717 . - 0 Parent=GSCOCT00020538001 | |
| 60392 chr11 manual_curation CDS 21214861 21214962 . - 0 Parent=GSCOCT00020538001 | |
| 60393 chr11 manual_curation CDS 21215816 21215923 . - 0 Parent=GSCOCT00020538001 | |
| 60394 chr11 manual_curation CDS 21216074 21216250 . - 0 Parent=GSCOCT00020538001 | |
| 60395 chr11 manual_curation CDS 21216978 21217258 . - 1 Parent=GSCOCT00020538001 | |
| 60396 chr11 manual_curation CDS 21218329 21218457 . - 1 Parent=GSCOCT00020538001 | |
| 60397 chr11 manual_curation CDS 21220292 21220343 . - 0 Parent=GSCOCT00020538001 | |
| 60398 chr11 manual_curation CDS 21220923 21220972 . - 1 Parent=GSCOCT00020538001 | |
| 60399 chr11 manual_curation CDS 21221071 21221154 . - 1 Parent=GSCOCT00020538001 | |
| 60400 chr11 manual_curation CDS 21223994 21224372 . - 0 Parent=GSCOCT00020538001 | |
| 60401 chr11 manual_curation gene 21235301 21236253 . - . ID=GSCOCG00020539001;Name=Cc11_g05710 | |
| 60402 chr11 manual_curation mRNA 21235301 21236253 . - . ID=GSCOCT00020539001;Parent=GSCOCG00020539001;Name=Cc11_g05710 | |
| 60403 chr11 manual_curation polypeptide 21235892 21236253 . - . ID=GSCOCP00020539001;Derives_from=GSCOCT00020539001;Name=Cc11_g05710;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020539001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1508866..1509043%2C1508682..1508734));owner=coffea | |
| 60404 chr11 manual_curation exon 21235301 21235944 . - . Parent=GSCOCT00020539001 | |
| 60405 chr11 manual_curation exon 21236076 21236253 . - . Parent=GSCOCT00020539001 | |
| 60406 chr11 manual_curation CDS 21235892 21235944 . - 1 Parent=GSCOCT00020539001 | |
| 60407 chr11 manual_curation CDS 21236076 21236253 . - 0 Parent=GSCOCT00020539001 | |
| 60408 chr11 manual_curation gene 21236663 21242561 . - . ID=GSCOCG00020540001;Name=Cc11_g05720 | |
| 60409 chr11 manual_curation mRNA 21236663 21242561 . - . ID=GSCOCT00020540001;Parent=GSCOCG00020540001;Name=Cc11_g05720 | |
| 60410 chr11 manual_curation polypeptide 21236663 21241655 . - . ID=GSCOCP00020540001;Dbxref=InterPro:IPR007145,PANTHER:PTHR19321,PFAM:PF03999,SwissProt:Q8L836,SwissProt:Q9FLP0,SwissProt:Q9SIS3,TAIR:AT1G14690.1,TAIR:AT2G01910.1,TAIR:AT5G55230.2,TrEMBL:B9S7E4,TrEMBL:I1L7A6,TrEMBL:I1NCV9;Derives_from=GSCOCT00020540001;Name=Cc11_g05720;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:65-kDa microtubule-associated protein 7,CC_functional_completeness:complete,CC_gene:MAP65-7,CC_gene:MAP65-6,CC_gene:MAP65-1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020540001~ 65-kDa microtubule-associated protein 7~ MAP65-7~ complete;original_location=complement(join(1514365..1514445%2C1513625..1513828%2C1512221..1512484%2C1511378..1511593%2C1511151..1511306%2C1510891..1511050%2C1510656..1510807%2C1510439..1510526%2C1510277..1510350%2C1510110..1510184%2C1509453..1509788));owner=coffea | |
| 60411 chr11 manual_curation exon 21236663 21236998 . - . Parent=GSCOCT00020540001 | |
| 60412 chr11 manual_curation exon 21237320 21237394 . - . Parent=GSCOCT00020540001 | |
| 60413 chr11 manual_curation exon 21237487 21237560 . - . Parent=GSCOCT00020540001 | |
| 60414 chr11 manual_curation exon 21237649 21237736 . - . Parent=GSCOCT00020540001 | |
| 60415 chr11 manual_curation exon 21237866 21238017 . - . Parent=GSCOCT00020540001 | |
| 60416 chr11 manual_curation exon 21238101 21238260 . - . Parent=GSCOCT00020540001 | |
| 60417 chr11 manual_curation exon 21238361 21238516 . - . Parent=GSCOCT00020540001 | |
| 60418 chr11 manual_curation exon 21238588 21238803 . - . Parent=GSCOCT00020540001 | |
| 60419 chr11 manual_curation exon 21239431 21239694 . - . Parent=GSCOCT00020540001 | |
| 60420 chr11 manual_curation exon 21240835 21241038 . - . Parent=GSCOCT00020540001 | |
| 60421 chr11 manual_curation exon 21241575 21242561 . - . Parent=GSCOCT00020540001 | |
| 60422 chr11 manual_curation CDS 21236663 21236998 . - 0 Parent=GSCOCT00020540001 | |
| 60423 chr11 manual_curation CDS 21237320 21237394 . - 0 Parent=GSCOCT00020540001 | |
| 60424 chr11 manual_curation CDS 21237487 21237560 . - 1 Parent=GSCOCT00020540001 | |
| 60425 chr11 manual_curation CDS 21237649 21237736 . - 0 Parent=GSCOCT00020540001 | |
| 60426 chr11 manual_curation CDS 21237866 21238017 . - 1 Parent=GSCOCT00020540001 | |
| 60427 chr11 manual_curation CDS 21238101 21238260 . - 0 Parent=GSCOCT00020540001 | |
| 60428 chr11 manual_curation CDS 21238361 21238516 . - 0 Parent=GSCOCT00020540001 | |
| 60429 chr11 manual_curation CDS 21238588 21238803 . - 0 Parent=GSCOCT00020540001 | |
| 60430 chr11 manual_curation CDS 21239431 21239694 . - 0 Parent=GSCOCT00020540001 | |
| 60431 chr11 manual_curation CDS 21240835 21241038 . - 0 Parent=GSCOCT00020540001 | |
| 60432 chr11 manual_curation CDS 21241575 21241655 . - 0 Parent=GSCOCT00020540001 | |
| 60433 chr11 manual_curation gene 21255964 21261234 . - . ID=GSCOCG00020541001;Name=Cc11_g05730 | |
| 60434 chr11 manual_curation mRNA 21255964 21261234 . - . ID=GSCOCT00020541001;Parent=GSCOCG00020541001;Name=Cc11_g05730 | |
| 60435 chr11 manual_curation polypeptide 21255964 21261193 . - . ID=GSCOCP00020541001;Dbxref=InterPro:IPR006671,PFAM:PF00134,SwissProt:Q0DTM7,SwissProt:Q9C5X2,TAIR:AT2G01905.1,TrEMBL:B9S7E5,TrEMBL:F6HFA7,TrEMBL:G7IBG8;Derives_from=GSCOCT00020541001;Name=Cc11_g05730;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:Os03g0237900,CC_gene:CYCJ18;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020541001~ Hypothetical protein~ Os03g0237900~ missing_functional_completeness;original_location=complement(join(1533909..1533983%2C1533741..1533817%2C1533068..1533167%2C1532901..1532999%2C1532797..1532824%2C1532651..1532721%2C1532439..1532559%2C1532267..1532327%2C1528754..1528802));owner=coffea | |
| 60436 chr11 manual_curation exon 21255964 21256012 . - . Parent=GSCOCT00020541001 | |
| 60437 chr11 manual_curation exon 21259477 21259537 . - . Parent=GSCOCT00020541001 | |
| 60438 chr11 manual_curation exon 21259649 21259769 . - . Parent=GSCOCT00020541001 | |
| 60439 chr11 manual_curation exon 21259861 21259931 . - . Parent=GSCOCT00020541001 | |
| 60440 chr11 manual_curation exon 21260007 21260034 . - . Parent=GSCOCT00020541001 | |
| 60441 chr11 manual_curation exon 21260111 21260209 . - . Parent=GSCOCT00020541001 | |
| 60442 chr11 manual_curation exon 21260278 21260377 . - . Parent=GSCOCT00020541001 | |
| 60443 chr11 manual_curation exon 21260951 21261027 . - . Parent=GSCOCT00020541001 | |
| 60444 chr11 manual_curation exon 21261119 21261234 . - . Parent=GSCOCT00020541001 | |
| 60445 chr11 manual_curation CDS 21255964 21256012 . - 2 Parent=GSCOCT00020541001 | |
| 60446 chr11 manual_curation CDS 21259477 21259537 . - 1 Parent=GSCOCT00020541001 | |
| 60447 chr11 manual_curation CDS 21259649 21259769 . - 0 Parent=GSCOCT00020541001 | |
| 60448 chr11 manual_curation CDS 21259861 21259931 . - 1 Parent=GSCOCT00020541001 | |
| 60449 chr11 manual_curation CDS 21260007 21260034 . - 0 Parent=GSCOCT00020541001 | |
| 60450 chr11 manual_curation CDS 21260111 21260209 . - 0 Parent=GSCOCT00020541001 | |
| 60451 chr11 manual_curation CDS 21260278 21260377 . - 2 Parent=GSCOCT00020541001 | |
| 60452 chr11 manual_curation CDS 21260951 21261027 . - 0 Parent=GSCOCT00020541001 | |
| 60453 chr11 manual_curation CDS 21261119 21261193 . - 0 Parent=GSCOCT00020541001 | |
| 60454 chr11 manual_curation gene 21266715 21272533 . + . ID=GSCOCG00020542001;Name=Cc11_g05740 | |
| 60455 chr11 manual_curation mRNA 21266715 21272533 . + . ID=GSCOCT00020542001;Parent=GSCOCG00020542001;Name=Cc11_g05740 | |
| 60456 chr11 manual_curation polypeptide 21266715 21272533 . + . ID=GSCOCP00020542001;Dbxref=InterPro:IPR001140,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR011527,InterPro:IPR017871,InterPro:IPR017940,PFAM:PF00005,PFAM:PF00664,PROFILE:PS50893,PROFILE:PS50929,PROSITE:PS00211,SMART:SM00382,SUPERFAMILY:SSF90123,SwissProt:O80725,SwissProt:Q9FWX7,SwissProt:Q9FWX8,TAIR:AT1G02520.1,TAIR:AT1G02530.1,TAIR:AT2G47000.1,TrEMBL:B9I9B8,TrEMBL:F6HZG2,TrEMBL:I0J0H5;Derives_from=GSCOCT00020542001;Name=Cc11_g05740;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0006810,GO:0016021,GO:0016887,GO:0017111,GO:0055085,CC_EC_number:3.6.3.44,CC_EC_number:3.6.3.44,PRODUCT:ABC transporter B family member 11,CC_functional_completeness:complete,CC_gene:ABCB11,CC_gene:ABCB12,CC_gene:ABCB4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020542001~ ABC transporter B family member 11~ ABCB11~ complete;original_location=join(1539505..1539810%2C1540083..1540137%2C1540227..1540402%2C1540483..1540704%2C1540778..1541016%2C1541146..1541671%2C1542035..1542308%2C1542500..1543389%2C1543977..1544243%2C1544353..1544616%2C1544738..1545031%2C1545240..1545323);owner=coffea | |
| 60457 chr11 manual_curation exon 21266715 21267020 . + . Parent=GSCOCT00020542001 | |
| 60458 chr11 manual_curation exon 21267293 21267347 . + . Parent=GSCOCT00020542001 | |
| 60459 chr11 manual_curation exon 21267437 21267612 . + . Parent=GSCOCT00020542001 | |
| 60460 chr11 manual_curation exon 21267693 21267914 . + . Parent=GSCOCT00020542001 | |
| 60461 chr11 manual_curation exon 21267988 21268226 . + . Parent=GSCOCT00020542001 | |
| 60462 chr11 manual_curation exon 21268356 21268881 . + . Parent=GSCOCT00020542001 | |
| 60463 chr11 manual_curation exon 21269245 21269518 . + . Parent=GSCOCT00020542001 | |
| 60464 chr11 manual_curation exon 21269710 21270599 . + . Parent=GSCOCT00020542001 | |
| 60465 chr11 manual_curation exon 21271187 21271453 . + . Parent=GSCOCT00020542001 | |
| 60466 chr11 manual_curation exon 21271563 21271826 . + . Parent=GSCOCT00020542001 | |
| 60467 chr11 manual_curation exon 21271948 21272241 . + . Parent=GSCOCT00020542001 | |
| 60468 chr11 manual_curation exon 21272450 21272533 . + . Parent=GSCOCT00020542001 | |
| 60469 chr11 manual_curation CDS 21266715 21267020 . + 0 Parent=GSCOCT00020542001 | |
| 60470 chr11 manual_curation CDS 21267293 21267347 . + 0 Parent=GSCOCT00020542001 | |
| 60471 chr11 manual_curation CDS 21267437 21267612 . + 1 Parent=GSCOCT00020542001 | |
| 60472 chr11 manual_curation CDS 21267693 21267914 . + 0 Parent=GSCOCT00020542001 | |
| 60473 chr11 manual_curation CDS 21267988 21268226 . + 0 Parent=GSCOCT00020542001 | |
| 60474 chr11 manual_curation CDS 21268356 21268881 . + 2 Parent=GSCOCT00020542001 | |
| 60475 chr11 manual_curation CDS 21269245 21269518 . + 0 Parent=GSCOCT00020542001 | |
| 60476 chr11 manual_curation CDS 21269710 21270599 . + 1 Parent=GSCOCT00020542001 | |
| 60477 chr11 manual_curation CDS 21271187 21271453 . + 0 Parent=GSCOCT00020542001 | |
| 60478 chr11 manual_curation CDS 21271563 21271826 . + 0 Parent=GSCOCT00020542001 | |
| 60479 chr11 manual_curation CDS 21271948 21272241 . + 0 Parent=GSCOCT00020542001 | |
| 60480 chr11 manual_curation CDS 21272450 21272533 . + 0 Parent=GSCOCT00020542001 | |
| 60481 chr11 manual_curation gene 21277376 21283555 . - . ID=GSCOCG00020544001;Name=Cc11_g05750 | |
| 60482 chr11 manual_curation mRNA 21277376 21283555 . - . ID=GSCOCT00020544001;Parent=GSCOCG00020544001;Name=Cc11_g05750 | |
| 60483 chr11 manual_curation polypeptide 21277376 21283555 . - . ID=GSCOCP00020544001;Dbxref=InterPro:IPR001140,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR011527,InterPro:IPR017871,InterPro:IPR017940,PFAM:PF00005,PFAM:PF00664,PROFILE:PS50893,PROFILE:PS50929,PROSITE:PS00211,SMART:SM00382,SUPERFAMILY:SSF90123,SwissProt:Q9FWX7,SwissProt:Q9FWX8,SwissProt:Q9SYI2,TAIR:AT1G02520.1,TAIR:AT1G02530.1,TAIR:AT4G01820.1,TrEMBL:I1LYF5,TrEMBL:I1MRZ0,TrEMBL:Q94IH6;Derives_from=GSCOCT00020544001;Name=Cc11_g05750;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0006810,GO:0016021,GO:0016887,GO:0017111,GO:0055085,CC_EC_number:3.6.3.44,CC_EC_number:3.6.3.44,PRODUCT:Putative ABC transporter B family member 12,CC_functional_completeness:complete,CC_gene:ABCB12,CC_gene:ABCB3,CC_gene:ABCB11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020544001~ Putative ABC transporter B family member 12~ ABCB12~ complete;original_location=complement(join(1556043..1556345%2C1555901..1555978%2C1555772..1555841%2C1555500..1555681%2C1555137..1555375%2C1554460..1554985%2C1554272..1554290%2C1553747..1554080%2C1553573..1553653%2C1553435..1553482%2C1553326..1553350%2C1553056..1553269%2C1552775..1553007%2C1552414..1552702%2C1552326..1552360%2C1551618..1551872%2C1551250..1551513%2C1550794..1551087%2C1550358..1550522%2C1550166..1550297));owner=coffea | |
| 60484 chr11 manual_curation exon 21277376 21277507 . - . Parent=GSCOCT00020544001 | |
| 60485 chr11 manual_curation exon 21277568 21277732 . - . Parent=GSCOCT00020544001 | |
| 60486 chr11 manual_curation exon 21278004 21278297 . - . Parent=GSCOCT00020544001 | |
| 60487 chr11 manual_curation exon 21278460 21278723 . - . Parent=GSCOCT00020544001 | |
| 60488 chr11 manual_curation exon 21278828 21279082 . - . Parent=GSCOCT00020544001 | |
| 60489 chr11 manual_curation exon 21279536 21279570 . - . Parent=GSCOCT00020544001 | |
| 60490 chr11 manual_curation exon 21279624 21279912 . - . Parent=GSCOCT00020544001 | |
| 60491 chr11 manual_curation exon 21279985 21280217 . - . Parent=GSCOCT00020544001 | |
| 60492 chr11 manual_curation exon 21280266 21280479 . - . Parent=GSCOCT00020544001 | |
| 60493 chr11 manual_curation exon 21280536 21280560 . - . Parent=GSCOCT00020544001 | |
| 60494 chr11 manual_curation exon 21280645 21280692 . - . Parent=GSCOCT00020544001 | |
| 60495 chr11 manual_curation exon 21280783 21280863 . - . Parent=GSCOCT00020544001 | |
| 60496 chr11 manual_curation exon 21280957 21281290 . - . Parent=GSCOCT00020544001 | |
| 60497 chr11 manual_curation exon 21281482 21281500 . - . Parent=GSCOCT00020544001 | |
| 60498 chr11 manual_curation exon 21281670 21282195 . - . Parent=GSCOCT00020544001 | |
| 60499 chr11 manual_curation exon 21282347 21282585 . - . Parent=GSCOCT00020544001 | |
| 60500 chr11 manual_curation exon 21282710 21282891 . - . Parent=GSCOCT00020544001 | |
| 60501 chr11 manual_curation exon 21282982 21283051 . - . Parent=GSCOCT00020544001 | |
| 60502 chr11 manual_curation exon 21283111 21283188 . - . Parent=GSCOCT00020544001 | |
| 60503 chr11 manual_curation exon 21283253 21283555 . - . Parent=GSCOCT00020544001 | |
| 60504 chr11 manual_curation CDS 21277376 21277507 . - 0 Parent=GSCOCT00020544001 | |
| 60505 chr11 manual_curation CDS 21277568 21277732 . - 0 Parent=GSCOCT00020544001 | |
| 60506 chr11 manual_curation CDS 21278004 21278297 . - 0 Parent=GSCOCT00020544001 | |
| 60507 chr11 manual_curation CDS 21278460 21278723 . - 0 Parent=GSCOCT00020544001 | |
| 60508 chr11 manual_curation CDS 21278828 21279082 . - 0 Parent=GSCOCT00020544001 | |
| 60509 chr11 manual_curation CDS 21279536 21279570 . - 1 Parent=GSCOCT00020544001 | |
| 60510 chr11 manual_curation CDS 21279624 21279912 . - 0 Parent=GSCOCT00020544001 | |
| 60511 chr11 manual_curation CDS 21279985 21280217 . - 1 Parent=GSCOCT00020544001 | |
| 60512 chr11 manual_curation CDS 21280266 21280479 . - 0 Parent=GSCOCT00020544001 | |
| 60513 chr11 manual_curation CDS 21280536 21280560 . - 2 Parent=GSCOCT00020544001 | |
| 60514 chr11 manual_curation CDS 21280645 21280692 . - 2 Parent=GSCOCT00020544001 | |
| 60515 chr11 manual_curation CDS 21280783 21280863 . - 2 Parent=GSCOCT00020544001 | |
| 60516 chr11 manual_curation CDS 21280957 21281290 . - 1 Parent=GSCOCT00020544001 | |
| 60517 chr11 manual_curation CDS 21281482 21281500 . - 0 Parent=GSCOCT00020544001 | |
| 60518 chr11 manual_curation CDS 21281670 21282195 . - 2 Parent=GSCOCT00020544001 | |
| 60519 chr11 manual_curation CDS 21282347 21282585 . - 0 Parent=GSCOCT00020544001 | |
| 60520 chr11 manual_curation CDS 21282710 21282891 . - 1 Parent=GSCOCT00020544001 | |
| 60521 chr11 manual_curation CDS 21282982 21283051 . - 0 Parent=GSCOCT00020544001 | |
| 60522 chr11 manual_curation CDS 21283111 21283188 . - 0 Parent=GSCOCT00020544001 | |
| 60523 chr11 manual_curation CDS 21283253 21283555 . - 0 Parent=GSCOCT00020544001 | |
| 60524 chr11 manual_curation gene 21301476 21311377 . + . ID=GSCOCG00020545001;Name=Cc11_g05760 | |
| 60525 chr11 manual_curation mRNA 21301476 21311377 . + . ID=GSCOCT00020545001;Parent=GSCOCG00020545001;Name=Cc11_g05760 | |
| 60526 chr11 manual_curation polypeptide 21302716 21311075 . + . ID=GSCOCP00020545001;Dbxref=InterPro:IPR000322,PANTHER:PTHR22762,PFAM:PF01055,PROSITE:PS00129,PROSITE:PS00707,SwissProt:Q4R4N7,SwissProt:Q8BHN3,SwissProt:Q94502,TAIR:AT3G23640.1,TAIR:AT5G11720.1,TAIR:AT5G63840.1,TrEMBL:B9HF49,TrEMBL:B9STU2,TrEMBL:F6GWJ7;Derives_from=GSCOCT00020545001;Name=Cc11_g05760;Ontology_term=CC_evidence_code:ISS,GO:0005975,CC_EC_number:3.2.1.84,PRODUCT:Neutral alpha-glucosidase AB,CC_functional_completeness:fragment,CC_gene:modA,CC_gene:Ganab,CC_gene:GANAB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020545001~ Neutral alpha-glucosidase AB~ modA~ fragment;original_location=join(1575506..1576003%2C1577900..1578173%2C1578258..1578393%2C1581852..1582062%2C1582168..1582374%2C1583497..1583644%2C1583756..1583865);owner=coffea | |
| 60527 chr11 manual_curation exon 21301476 21303213 . + . Parent=GSCOCT00020545001 | |
| 60528 chr11 manual_curation exon 21305110 21305383 . + . Parent=GSCOCT00020545001 | |
| 60529 chr11 manual_curation exon 21305468 21305603 . + . Parent=GSCOCT00020545001 | |
| 60530 chr11 manual_curation exon 21309062 21309272 . + . Parent=GSCOCT00020545001 | |
| 60531 chr11 manual_curation exon 21309378 21309584 . + . Parent=GSCOCT00020545001 | |
| 60532 chr11 manual_curation exon 21310707 21310854 . + . Parent=GSCOCT00020545001 | |
| 60533 chr11 manual_curation exon 21310966 21311377 . + . Parent=GSCOCT00020545001 | |
| 60534 chr11 manual_curation CDS 21302716 21303213 . + 0 Parent=GSCOCT00020545001 | |
| 60535 chr11 manual_curation CDS 21305110 21305383 . + 0 Parent=GSCOCT00020545001 | |
| 60536 chr11 manual_curation CDS 21305468 21305603 . + 1 Parent=GSCOCT00020545001 | |
| 60537 chr11 manual_curation CDS 21309062 21309272 . + 2 Parent=GSCOCT00020545001 | |
| 60538 chr11 manual_curation CDS 21309378 21309584 . + 0 Parent=GSCOCT00020545001 | |
| 60539 chr11 manual_curation CDS 21310707 21310854 . + 0 Parent=GSCOCT00020545001 | |
| 60540 chr11 manual_curation CDS 21310966 21311075 . + 1 Parent=GSCOCT00020545001 | |
| 60541 chr11 manual_curation gene 21317749 21324366 . - . ID=GSCOCG00020546001;Name=Cc11_g05770 | |
| 60542 chr11 manual_curation mRNA 21317749 21324366 . - . ID=GSCOCT00020546001;Parent=GSCOCG00020546001;Name=Cc11_g05770 | |
| 60543 chr11 manual_curation polypeptide 21317749 21324366 . - . ID=GSCOCP00020546001;Dbxref=InterPro:IPR001140,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR011527,InterPro:IPR017871,InterPro:IPR017940,PFAM:PF00005,PFAM:PF00664,PROFILE:PS50893,PROFILE:PS50929,PROSITE:PS00211,SMART:SM00382,SUPERFAMILY:SSF90123,SwissProt:O80725,SwissProt:Q9FWX7,SwissProt:Q9M1Q9,TAIR:AT1G02520.1,TAIR:AT2G47000.1,TAIR:AT3G62150.1,TrEMBL:B9RN48,TrEMBL:C5XHI4,TrEMBL:F6HZG2;Derives_from=GSCOCT00020546001;Name=Cc11_g05770;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0006810,GO:0016021,GO:0016887,GO:0017111,GO:0055085,CC_EC_number:3.6.3.44,CC_EC_number:3.6.3.44,PRODUCT:ABC transporter B family member 11,CC_functional_completeness:complete,CC_gene:ABCB11,CC_gene:ABCB4,CC_gene:ABCB21;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020546001~ ABC transporter B family member 11~ ABCB11~ complete;original_location=complement(join(1596881..1597156%2C1596580..1596634%2C1596318..1596493%2C1596012..1596233%2C1595680..1595918%2C1595385..1595476%2C1594951..1595159%2C1594323..1594596%2C1592852..1593741%2C1591960..1592226%2C1591614..1591877%2C1591157..1591450%2C1590539..1590895));owner=coffea | |
| 60544 chr11 manual_curation exon 21317749 21318105 . - . Parent=GSCOCT00020546001 | |
| 60545 chr11 manual_curation exon 21318367 21318660 . - . Parent=GSCOCT00020546001 | |
| 60546 chr11 manual_curation exon 21318824 21319087 . - . Parent=GSCOCT00020546001 | |
| 60547 chr11 manual_curation exon 21319170 21319436 . - . Parent=GSCOCT00020546001 | |
| 60548 chr11 manual_curation exon 21320062 21320951 . - . Parent=GSCOCT00020546001 | |
| 60549 chr11 manual_curation exon 21321533 21321806 . - . Parent=GSCOCT00020546001 | |
| 60550 chr11 manual_curation exon 21322161 21322369 . - . Parent=GSCOCT00020546001 | |
| 60551 chr11 manual_curation exon 21322595 21322686 . - . Parent=GSCOCT00020546001 | |
| 60552 chr11 manual_curation exon 21322890 21323128 . - . Parent=GSCOCT00020546001 | |
| 60553 chr11 manual_curation exon 21323222 21323443 . - . Parent=GSCOCT00020546001 | |
| 60554 chr11 manual_curation exon 21323528 21323703 . - . Parent=GSCOCT00020546001 | |
| 60555 chr11 manual_curation exon 21323790 21323844 . - . Parent=GSCOCT00020546001 | |
| 60556 chr11 manual_curation exon 21324091 21324366 . - . Parent=GSCOCT00020546001 | |
| 60557 chr11 manual_curation CDS 21317749 21318105 . - 0 Parent=GSCOCT00020546001 | |
| 60558 chr11 manual_curation CDS 21318367 21318660 . - 0 Parent=GSCOCT00020546001 | |
| 60559 chr11 manual_curation CDS 21318824 21319087 . - 0 Parent=GSCOCT00020546001 | |
| 60560 chr11 manual_curation CDS 21319170 21319436 . - 0 Parent=GSCOCT00020546001 | |
| 60561 chr11 manual_curation CDS 21320062 21320951 . - 1 Parent=GSCOCT00020546001 | |
| 60562 chr11 manual_curation CDS 21321533 21321806 . - 0 Parent=GSCOCT00020546001 | |
| 60563 chr11 manual_curation CDS 21322161 21322369 . - 1 Parent=GSCOCT00020546001 | |
| 60564 chr11 manual_curation CDS 21322595 21322686 . - 2 Parent=GSCOCT00020546001 | |
| 60565 chr11 manual_curation CDS 21322890 21323128 . - 0 Parent=GSCOCT00020546001 | |
| 60566 chr11 manual_curation CDS 21323222 21323443 . - 0 Parent=GSCOCT00020546001 | |
| 60567 chr11 manual_curation CDS 21323528 21323703 . - 1 Parent=GSCOCT00020546001 | |
| 60568 chr11 manual_curation CDS 21323790 21323844 . - 0 Parent=GSCOCT00020546001 | |
| 60569 chr11 manual_curation CDS 21324091 21324366 . - 0 Parent=GSCOCT00020546001 | |
| 60570 chr11 manual_curation gene 21368854 21378201 . + . ID=GSCOCG00020547001;Name=Cc11_g05780 | |
| 60571 chr11 manual_curation mRNA 21368854 21378201 . + . ID=GSCOCT00020547001;Parent=GSCOCG00020547001;Name=Cc11_g05780 | |
| 60572 chr11 manual_curation polypeptide 21368974 21377721 . + . ID=GSCOCP00020547001;Dbxref=InterPro:IPR000322,PANTHER:PTHR22762,PFAM:PF01055,PROSITE:PS00129,PROSITE:PS00707,SwissProt:Q4R4N7,SwissProt:Q8BHN3,SwissProt:Q94502,TAIR:AT3G23640.1,TAIR:AT5G11720.1,TAIR:AT5G63840.1,TrEMBL:B9STU2,TrEMBL:O24375,TrEMBL:Q70AC6;Derives_from=GSCOCT00020547001;Name=Cc11_g05780;Ontology_term=CC_evidence_code:ISS,GO:0005975,CC_EC_number:3.2.1.84,PRODUCT:Putative Neutral alpha-glucosidase AB,CC_functional_completeness:complete,CC_gene:Ganab,CC_gene:GANAB,CC_gene:modA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020547001~ Putative Neutral alpha-glucosidase AB~ Ganab~ complete;original_location=join(1641764..1642126%2C1642190..1643371%2C1645157..1645430%2C1645513..1645648%2C1648458..1648668%2C1648771..1648977%2C1650143..1650511);owner=coffea | |
| 60573 chr11 manual_curation exon 21368854 21369336 . + . Parent=GSCOCT00020547001 | |
| 60574 chr11 manual_curation exon 21369400 21370581 . + . Parent=GSCOCT00020547001 | |
| 60575 chr11 manual_curation exon 21372367 21372640 . + . Parent=GSCOCT00020547001 | |
| 60576 chr11 manual_curation exon 21372723 21372858 . + . Parent=GSCOCT00020547001 | |
| 60577 chr11 manual_curation exon 21375668 21375878 . + . Parent=GSCOCT00020547001 | |
| 60578 chr11 manual_curation exon 21375981 21376187 . + . Parent=GSCOCT00020547001 | |
| 60579 chr11 manual_curation exon 21377353 21378201 . + . Parent=GSCOCT00020547001 | |
| 60580 chr11 manual_curation CDS 21368974 21369336 . + 0 Parent=GSCOCT00020547001 | |
| 60581 chr11 manual_curation CDS 21369400 21370581 . + 0 Parent=GSCOCT00020547001 | |
| 60582 chr11 manual_curation CDS 21372367 21372640 . + 0 Parent=GSCOCT00020547001 | |
| 60583 chr11 manual_curation CDS 21372723 21372858 . + 1 Parent=GSCOCT00020547001 | |
| 60584 chr11 manual_curation CDS 21375668 21375878 . + 2 Parent=GSCOCT00020547001 | |
| 60585 chr11 manual_curation CDS 21375981 21376187 . + 0 Parent=GSCOCT00020547001 | |
| 60586 chr11 manual_curation CDS 21377353 21377721 . + 0 Parent=GSCOCT00020547001 | |
| 60587 chr11 manual_curation gene 21380870 21384262 . - . ID=GSCOCG00020548001;Name=Cc11_g05790 | |
| 60588 chr11 manual_curation mRNA 21380870 21384262 . - . ID=GSCOCT00020548001;Parent=GSCOCG00020548001;Name=Cc11_g05790 | |
| 60589 chr11 manual_curation polypeptide 21380870 21384262 . - . ID=GSCOCP00020548001;Dbxref=InterPro:IPR000300,InterPro:IPR005135,PFAM:PF03372,SMART:SM00128,SUPERFAMILY:SSF56219,SwissProt:Q84MA2,SwissProt:Q9FUR2,SwissProt:Q9LR47,TAIR:AT1G05470.1,TAIR:AT2G01900.1,TAIR:AT2G37440.1,TrEMBL:B9S7E6,TrEMBL:D7T8G0,TrEMBL:I1KRQ5;Derives_from=GSCOCT00020548001;Name=Cc11_g05790;Ontology_term=CC_evidence_code:ISS,GO:0004437,CC_EC_number:3.1.3.56,PRODUCT:Putative Type I inositol 1%2C4%2C5-trisphosphate 5-phosphatase 2,CC_functional_completeness:fragment,CC_gene:CVP2,CC_gene:IP5P2,CC_gene:IP5P1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020548001~ Putative Type I inositol 1%2C4%2C5-trisphosphate 5-phosphatase 2~ CVP2~ fragment;original_location=complement(join(1656880..1657052%2C1656526..1656633%2C1656082..1656406%2C1655496..1655680%2C1654349..1654457%2C1654033..1654184%2C1653660..1653903));owner=coffea | |
| 60590 chr11 manual_curation exon 21380870 21381113 . - . Parent=GSCOCT00020548001 | |
| 60591 chr11 manual_curation exon 21381243 21381394 . - . Parent=GSCOCT00020548001 | |
| 60592 chr11 manual_curation exon 21381559 21381667 . - . Parent=GSCOCT00020548001 | |
| 60593 chr11 manual_curation exon 21382706 21382890 . - . Parent=GSCOCT00020548001 | |
| 60594 chr11 manual_curation exon 21383292 21383616 . - . Parent=GSCOCT00020548001 | |
| 60595 chr11 manual_curation exon 21383736 21383843 . - . Parent=GSCOCT00020548001 | |
| 60596 chr11 manual_curation exon 21384090 21384262 . - . Parent=GSCOCT00020548001 | |
| 60597 chr11 manual_curation CDS 21380870 21381113 . - 2 Parent=GSCOCT00020548001 | |
| 60598 chr11 manual_curation CDS 21381243 21381394 . - 0 Parent=GSCOCT00020548001 | |
| 60599 chr11 manual_curation CDS 21381559 21381667 . - 2 Parent=GSCOCT00020548001 | |
| 60600 chr11 manual_curation CDS 21382706 21382890 . - 0 Parent=GSCOCT00020548001 | |
| 60601 chr11 manual_curation CDS 21383292 21383616 . - 2 Parent=GSCOCT00020548001 | |
| 60602 chr11 manual_curation CDS 21383736 21383843 . - 2 Parent=GSCOCT00020548001 | |
| 60603 chr11 manual_curation CDS 21384090 21384262 . - 0 Parent=GSCOCT00020548001 | |
| 60604 chr11 manual_curation gene 21426571 21429250 . + . ID=GSCOCG00020551001;Name=Cc11_g05800 | |
| 60605 chr11 manual_curation mRNA 21426571 21429250 . + . ID=GSCOCT00020551001;Parent=GSCOCG00020551001;Name=Cc11_g05800 | |
| 60606 chr11 manual_curation polypeptide 21426571 21428949 . + . ID=GSCOCP00020551001;Dbxref=GENE3D:G3DSA:1.10.220.10,InterPro:IPR001464,InterPro:IPR009118,InterPro:IPR018252,InterPro:IPR018502,PANTHER:PTHR10502,PANTHER:PTHR10502:SF10,PFAM:PF00191,PRINTS:PR00196,PROSITE:PS00223,SMART:SM00335,SUPERFAMILY:SSF47874,SwissProt:P27216,SwissProt:Q99JG3,SwissProt:Q9C9X3,TAIR:AT1G68090.1,TAIR:AT5G10220.1,TAIR:AT5G10230.1,TrEMBL:B3TLL7,TrEMBL:C6THM2,TrEMBL:D7T8G1;Derives_from=GSCOCT00020551001;Name=Cc11_g05800;Ontology_term=CC_evidence_code:ISS,GO:0005509,GO:0005544,CC_EC_number:missing_EC_number,PRODUCT:Annexin D5,CC_functional_completeness:complete,CC_gene:ANN5,CC_gene:Anxa13,CC_gene:ANXA13;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020551001~ Annexin D5~ ANN5~ complete;original_location=join(1699361..1699588%2C1699823..1700038%2C1700734..1700949%2C1701028..1701117%2C1701536..1701739);owner=coffea | |
| 60607 chr11 manual_curation exon 21426571 21426798 . + . Parent=GSCOCT00020551001 | |
| 60608 chr11 manual_curation exon 21427033 21427248 . + . Parent=GSCOCT00020551001 | |
| 60609 chr11 manual_curation exon 21427944 21428159 . + . Parent=GSCOCT00020551001 | |
| 60610 chr11 manual_curation exon 21428238 21428327 . + . Parent=GSCOCT00020551001 | |
| 60611 chr11 manual_curation exon 21428746 21429250 . + . Parent=GSCOCT00020551001 | |
| 60612 chr11 manual_curation CDS 21426571 21426798 . + 0 Parent=GSCOCT00020551001 | |
| 60613 chr11 manual_curation CDS 21427033 21427248 . + 0 Parent=GSCOCT00020551001 | |
| 60614 chr11 manual_curation CDS 21427944 21428159 . + 0 Parent=GSCOCT00020551001 | |
| 60615 chr11 manual_curation CDS 21428238 21428327 . + 0 Parent=GSCOCT00020551001 | |
| 60616 chr11 manual_curation CDS 21428746 21428949 . + 0 Parent=GSCOCT00020551001 | |
| 60617 chr11 manual_curation gene 21431933 21436925 . + . ID=GSCOCG00020552001;Name=Cc11_g05810 | |
| 60618 chr11 manual_curation mRNA 21431933 21436925 . + . ID=GSCOCT00020552001;Parent=GSCOCG00020552001;Name=Cc11_g05810 | |
| 60619 chr11 manual_curation polypeptide 21432170 21436831 . + . ID=GSCOCP00020552001;Dbxref=InterPro:IPR004843,PFAM:PF00149,SwissProt:Q8H129,SwissProt:Q8VYZ2,SwissProt:Q9SCX8,TAIR:AT1G14700.1,TAIR:AT2G01890.1,TAIR:AT3G17790.1,TrEMBL:B9HJK3,TrEMBL:D7T8G2,TrEMBL:Q6J5M7;Derives_from=GSCOCT00020552001;Name=Cc11_g05810;Ontology_term=CC_evidence_code:ISS,GO:0016787,CC_EC_number:missing_EC_number,PRODUCT:Purple acid phosphatase 8,CC_functional_completeness:complete,CC_gene:PAP8,CC_gene:PAP3,CC_gene:PAP17;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020552001~ Purple acid phosphatase 8~ PAP8~ complete;original_location=join(1704960..1705154%2C1708037..1708193%2C1708285..1708392%2C1708611..1708738%2C1708930..1709058%2C1709260..1709327%2C1709411..1709621);owner=coffea | |
| 60620 chr11 manual_curation exon 21431933 21432364 . + . Parent=GSCOCT00020552001 | |
| 60621 chr11 manual_curation exon 21435247 21435403 . + . Parent=GSCOCT00020552001 | |
| 60622 chr11 manual_curation exon 21435495 21435602 . + . Parent=GSCOCT00020552001 | |
| 60623 chr11 manual_curation exon 21435821 21435948 . + . Parent=GSCOCT00020552001 | |
| 60624 chr11 manual_curation exon 21436140 21436268 . + . Parent=GSCOCT00020552001 | |
| 60625 chr11 manual_curation exon 21436470 21436537 . + . Parent=GSCOCT00020552001 | |
| 60626 chr11 manual_curation exon 21436621 21436925 . + . Parent=GSCOCT00020552001 | |
| 60627 chr11 manual_curation CDS 21432170 21432364 . + 0 Parent=GSCOCT00020552001 | |
| 60628 chr11 manual_curation CDS 21435247 21435403 . + 0 Parent=GSCOCT00020552001 | |
| 60629 chr11 manual_curation CDS 21435495 21435602 . + 1 Parent=GSCOCT00020552001 | |
| 60630 chr11 manual_curation CDS 21435821 21435948 . + 1 Parent=GSCOCT00020552001 | |
| 60631 chr11 manual_curation CDS 21436140 21436268 . + 0 Parent=GSCOCT00020552001 | |
| 60632 chr11 manual_curation CDS 21436470 21436537 . + 0 Parent=GSCOCT00020552001 | |
| 60633 chr11 manual_curation CDS 21436621 21436831 . + 2 Parent=GSCOCT00020552001 | |
| 60634 chr11 manual_curation gene 21442579 21449413 . + . ID=GSCOCG00020553001;Name=Cc11_g05820 | |
| 60635 chr11 manual_curation mRNA 21442579 21449413 . + . ID=GSCOCT00020553001;Parent=GSCOCG00020553001;Name=Cc11_g05820 | |
| 60636 chr11 manual_curation polypeptide 21442638 21449181 . + . ID=GSCOCP00020553001;Dbxref=InterPro:IPR004843,PFAM:PF00149,SwissProt:Q8H129,SwissProt:Q8VYU7,SwissProt:Q8VYZ2,TAIR:AT1G14700.1,TAIR:AT1G25230.1,TAIR:AT2G01890.1,TrEMBL:B9HJK3,TrEMBL:D7T8G2,TrEMBL:Q6J5M7;Derives_from=GSCOCT00020553001;Name=Cc11_g05820;Ontology_term=CC_evidence_code:ISS,GO:0016787,CC_EC_number:missing_EC_number,PRODUCT:Purple acid phosphatase 3,CC_functional_completeness:complete,CC_gene:PAP3,CC_gene:PAP8,CC_gene:PAP4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020553001~ Purple acid phosphatase 3~ PAP3~ complete;original_location=join(1715428..1715622%2C1720206..1720362%2C1720587..1720694%2C1720889..1721016%2C1721180..1721308%2C1721612..1721679%2C1721761..1721971);owner=coffea | |
| 60637 chr11 manual_curation exon 21442579 21442832 . + . Parent=GSCOCT00020553001 | |
| 60638 chr11 manual_curation exon 21447416 21447572 . + . Parent=GSCOCT00020553001 | |
| 60639 chr11 manual_curation exon 21447797 21447904 . + . Parent=GSCOCT00020553001 | |
| 60640 chr11 manual_curation exon 21448099 21448226 . + . Parent=GSCOCT00020553001 | |
| 60641 chr11 manual_curation exon 21448390 21448518 . + . Parent=GSCOCT00020553001 | |
| 60642 chr11 manual_curation exon 21448822 21448889 . + . Parent=GSCOCT00020553001 | |
| 60643 chr11 manual_curation exon 21448971 21449413 . + . Parent=GSCOCT00020553001 | |
| 60644 chr11 manual_curation CDS 21442638 21442832 . + 0 Parent=GSCOCT00020553001 | |
| 60645 chr11 manual_curation CDS 21447416 21447572 . + 0 Parent=GSCOCT00020553001 | |
| 60646 chr11 manual_curation CDS 21447797 21447904 . + 1 Parent=GSCOCT00020553001 | |
| 60647 chr11 manual_curation CDS 21448099 21448226 . + 1 Parent=GSCOCT00020553001 | |
| 60648 chr11 manual_curation CDS 21448390 21448518 . + 0 Parent=GSCOCT00020553001 | |
| 60649 chr11 manual_curation CDS 21448822 21448889 . + 0 Parent=GSCOCT00020553001 | |
| 60650 chr11 manual_curation CDS 21448971 21449181 . + 2 Parent=GSCOCT00020553001 | |
| 60651 chr11 manual_curation gene 21455190 21459018 . - . ID=GSCOCG00020554001;Name=Cc11_g05830 | |
| 60652 chr11 manual_curation mRNA 21455190 21459018 . - . ID=GSCOCT00020554001;Parent=GSCOCG00020554001;Name=Cc11_g05830 | |
| 60653 chr11 manual_curation polypeptide 21455190 21459018 . - . ID=GSCOCP00020554001;Dbxref=SwissProt:Q8H129,SwissProt:Q8VYU7,SwissProt:Q8VYZ2,TAIR:AT1G14700.1,TAIR:AT1G25230.1,TAIR:AT2G01890.1,TrEMBL:B9HJK3,TrEMBL:D7T8G2,TrEMBL:I1KRQ7;Derives_from=GSCOCT00020554001;Name=Cc11_g05830;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Purple acid phosphatase 8,CC_functional_completeness:complete,CC_gene:PAP8,CC_gene:PAP3,CC_gene:PAP4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020554001~ Putative Purple acid phosphatase 8~ PAP8~ complete;original_location=complement(join(1731690..1731808%2C1731470..1731630%2C1730184..1730405%2C1729822..1729927%2C1729493..1729606%2C1728927..1729015%2C1728472..1728492%2C1728272..1728395%2C1727980..1728187));owner=coffea | |
| 60654 chr11 manual_curation exon 21455190 21455397 . - . Parent=GSCOCT00020554001 | |
| 60655 chr11 manual_curation exon 21455482 21455605 . - . Parent=GSCOCT00020554001 | |
| 60656 chr11 manual_curation exon 21455682 21455702 . - . Parent=GSCOCT00020554001 | |
| 60657 chr11 manual_curation exon 21456137 21456225 . - . Parent=GSCOCT00020554001 | |
| 60658 chr11 manual_curation exon 21456703 21456816 . - . Parent=GSCOCT00020554001 | |
| 60659 chr11 manual_curation exon 21457032 21457137 . - . Parent=GSCOCT00020554001 | |
| 60660 chr11 manual_curation exon 21457394 21457615 . - . Parent=GSCOCT00020554001 | |
| 60661 chr11 manual_curation exon 21458680 21458840 . - . Parent=GSCOCT00020554001 | |
| 60662 chr11 manual_curation exon 21458900 21459018 . - . Parent=GSCOCT00020554001 | |
| 60663 chr11 manual_curation CDS 21455190 21455397 . - 2 Parent=GSCOCT00020554001 | |
| 60664 chr11 manual_curation CDS 21455482 21455605 . - 1 Parent=GSCOCT00020554001 | |
| 60665 chr11 manual_curation CDS 21455682 21455702 . - 1 Parent=GSCOCT00020554001 | |
| 60666 chr11 manual_curation CDS 21456137 21456225 . - 2 Parent=GSCOCT00020554001 | |
| 60667 chr11 manual_curation CDS 21456703 21456816 . - 2 Parent=GSCOCT00020554001 | |
| 60668 chr11 manual_curation CDS 21457032 21457137 . - 1 Parent=GSCOCT00020554001 | |
| 60669 chr11 manual_curation CDS 21457394 21457615 . - 1 Parent=GSCOCT00020554001 | |
| 60670 chr11 manual_curation CDS 21458680 21458840 . - 2 Parent=GSCOCT00020554001 | |
| 60671 chr11 manual_curation CDS 21458900 21459018 . - 0 Parent=GSCOCT00020554001 | |
| 60672 chr11 manual_curation gene 21459423 21468016 . - . ID=GSCOCG00020555001;Name=Cc11_g05840 | |
| 60673 chr11 manual_curation mRNA 21459423 21468016 . - . ID=GSCOCT00020555001;Parent=GSCOCG00020555001;Name=Cc11_g05840 | |
| 60674 chr11 manual_curation polypeptide 21459423 21468016 . - . ID=GSCOCP00020555001;Dbxref=InterPro:IPR006620,SMART:SM00702,SwissProt:Q9R1J8,TAIR:AT1G68080.1,TrEMBL:B9SNI2,TrEMBL:F6HFA8,TrEMBL:I1KRR4;Derives_from=GSCOCT00020555001;Name=Cc11_g05840;Ontology_term=CC_evidence_code:ISS,GO:0005506,GO:0031418,GO:0055114,CC_EC_number:1.14.11.7,PRODUCT:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein,CC_functional_completeness:complete,CC_gene:Lepre1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020555001~ 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein~ Lepre1~ complete;original_location=complement(join(1740738..1740806%2C1740520..1740646%2C1740286..1740361%2C1739599..1739671%2C1738535..1738630%2C1734580..1734630%2C1733320..1733685%2C1732213..1732557));owner=coffea | |
| 60675 chr11 manual_curation exon 21459423 21459767 . - . Parent=GSCOCT00020555001 | |
| 60676 chr11 manual_curation exon 21460530 21460895 . - . Parent=GSCOCT00020555001 | |
| 60677 chr11 manual_curation exon 21461790 21461840 . - . Parent=GSCOCT00020555001 | |
| 60678 chr11 manual_curation exon 21465745 21465840 . - . Parent=GSCOCT00020555001 | |
| 60679 chr11 manual_curation exon 21466809 21466881 . - . Parent=GSCOCT00020555001 | |
| 60680 chr11 manual_curation exon 21467496 21467571 . - . Parent=GSCOCT00020555001 | |
| 60681 chr11 manual_curation exon 21467730 21467856 . - . Parent=GSCOCT00020555001 | |
| 60682 chr11 manual_curation exon 21467948 21468016 . - . Parent=GSCOCT00020555001 | |
| 60683 chr11 manual_curation CDS 21459423 21459767 . - 0 Parent=GSCOCT00020555001 | |
| 60684 chr11 manual_curation CDS 21460530 21460895 . - 0 Parent=GSCOCT00020555001 | |
| 60685 chr11 manual_curation CDS 21461790 21461840 . - 0 Parent=GSCOCT00020555001 | |
| 60686 chr11 manual_curation CDS 21465745 21465840 . - 0 Parent=GSCOCT00020555001 | |
| 60687 chr11 manual_curation CDS 21466809 21466881 . - 2 Parent=GSCOCT00020555001 | |
| 60688 chr11 manual_curation CDS 21467496 21467571 . - 1 Parent=GSCOCT00020555001 | |
| 60689 chr11 manual_curation CDS 21467730 21467856 . - 0 Parent=GSCOCT00020555001 | |
| 60690 chr11 manual_curation CDS 21467948 21468016 . - 0 Parent=GSCOCT00020555001 | |
| 60691 chr11 manual_curation gene 21475190 21477480 . - . ID=GSCOCG00020557001;Name=Cc11_g05850 | |
| 60692 chr11 manual_curation mRNA 21475190 21477480 . - . ID=GSCOCT00020557001;Parent=GSCOCG00020557001;Name=Cc11_g05850 | |
| 60693 chr11 manual_curation polypeptide 21475190 21476879 . - . ID=GSCOCP00020557001;Dbxref=TAIR:AT1G14710.1,TAIR:AT2G17970.1,TAIR:AT4G02940.1,TrEMBL:B9SNI0,TrEMBL:F6HFA9,TrEMBL:I1KRR5;Derives_from=GSCOCT00020557001;Name=Cc11_g05850;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative hydroxyproline-rich glycoprotein family protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020557001~ Putative hydroxyproline-rich glycoprotein family protein~ unknown_gene~ fragment;original_location=complement(join(1749575..1749669%2C1749503..1749522%2C1749344..1749456%2C1749100..1749254%2C1748237..1748697%2C1747980..1748161));owner=coffea | |
| 60694 chr11 manual_curation exon 21475190 21475371 . - . Parent=GSCOCT00020557001 | |
| 60695 chr11 manual_curation exon 21475447 21475907 . - . Parent=GSCOCT00020557001 | |
| 60696 chr11 manual_curation exon 21476310 21476464 . - . Parent=GSCOCT00020557001 | |
| 60697 chr11 manual_curation exon 21476554 21476666 . - . Parent=GSCOCT00020557001 | |
| 60698 chr11 manual_curation exon 21476713 21476732 . - . Parent=GSCOCT00020557001 | |
| 60699 chr11 manual_curation exon 21476785 21477480 . - . Parent=GSCOCT00020557001 | |
| 60700 chr11 manual_curation CDS 21475190 21475371 . - 1 Parent=GSCOCT00020557001 | |
| 60701 chr11 manual_curation CDS 21475447 21475907 . - 2 Parent=GSCOCT00020557001 | |
| 60702 chr11 manual_curation CDS 21476310 21476464 . - 0 Parent=GSCOCT00020557001 | |
| 60703 chr11 manual_curation CDS 21476554 21476666 . - 1 Parent=GSCOCT00020557001 | |
| 60704 chr11 manual_curation CDS 21476713 21476732 . - 2 Parent=GSCOCT00020557001 | |
| 60705 chr11 manual_curation CDS 21476785 21476879 . - 0 Parent=GSCOCT00020557001 | |
| 60706 chr11 manual_curation gene 21479106 21482146 . - . ID=GSCOCG00020559001;Name=Cc11_g05860 | |
| 60707 chr11 manual_curation mRNA 21479106 21482146 . - . ID=GSCOCT00020559001;Parent=GSCOCG00020559001;Name=Cc11_g05860 | |
| 60708 chr11 manual_curation polypeptide 21479216 21482146 . - . ID=GSCOCP00020559001;Dbxref=TAIR:AT1G14710.1,TAIR:AT2G48080.1,TAIR:AT4G02940.1,TrEMBL:A5BBI5,TrEMBL:B9SNI0,TrEMBL:F6HFA9;Derives_from=GSCOCT00020559001;Name=Cc11_g05860;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative hydroxyproline-rich glycoprotein family protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020559001~ Putative hydroxyproline-rich glycoprotein family protein~ unknown_gene~ fragment;original_location=complement(join(1754306..1754936%2C1752727..1752795%2C1752258..1752370%2C1752006..1752152));owner=coffea | |
| 60709 chr11 manual_curation exon 21479106 21479362 . - . Parent=GSCOCT00020559001 | |
| 60710 chr11 manual_curation exon 21479468 21479580 . - . Parent=GSCOCT00020559001 | |
| 60711 chr11 manual_curation exon 21479937 21480005 . - . Parent=GSCOCT00020559001 | |
| 60712 chr11 manual_curation exon 21481516 21482146 . - . Parent=GSCOCT00020559001 | |
| 60713 chr11 manual_curation CDS 21479216 21479362 . - 0 Parent=GSCOCT00020559001 | |
| 60714 chr11 manual_curation CDS 21479468 21479580 . - 1 Parent=GSCOCT00020559001 | |
| 60715 chr11 manual_curation CDS 21479937 21480005 . - 1 Parent=GSCOCT00020559001 | |
| 60716 chr11 manual_curation CDS 21481516 21482146 . - 0 Parent=GSCOCT00020559001 | |
| 60717 chr11 manual_curation gene 21504948 21505701 . + . ID=GSCOCG00020561001;Name=Cc11_g05870 | |
| 60718 chr11 manual_curation mRNA 21504948 21505701 . + . ID=GSCOCT00020561001;Parent=GSCOCG00020561001;Name=Cc11_g05870 | |
| 60719 chr11 manual_curation polypeptide 21504948 21505701 . + . ID=GSCOCP00020561001;Dbxref=TAIR:AT1G43722.1,TAIR:AT5G28730.1,TAIR:AT5G41980.1,TrEMBL:A5B642,TrEMBL:A5C6X6,TrEMBL:Q1WIR8;Derives_from=GSCOCT00020561001;Name=Cc11_g05870;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:CONTAINS InterPro DOMAIN/s,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020561001~ CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).~ unknown_gene~ fragment;original_location=join(1777738..1777941%2C1778083..1778311%2C1778418..1778491);owner=coffea | |
| 60720 chr11 manual_curation exon 21504948 21505151 . + . Parent=GSCOCT00020561001 | |
| 60721 chr11 manual_curation exon 21505293 21505521 . + . Parent=GSCOCT00020561001 | |
| 60722 chr11 manual_curation exon 21505628 21505701 . + . Parent=GSCOCT00020561001 | |
| 60723 chr11 manual_curation CDS 21504948 21505151 . + 0 Parent=GSCOCT00020561001 | |
| 60724 chr11 manual_curation CDS 21505293 21505521 . + 0 Parent=GSCOCT00020561001 | |
| 60725 chr11 manual_curation CDS 21505628 21505701 . + 1 Parent=GSCOCT00020561001 | |
| 60726 chr11 manual_curation gene 21506648 21513410 . + . ID=GSCOCG00020563001;Name=Cc11_g05880 | |
| 60727 chr11 manual_curation mRNA 21506648 21513410 . + . ID=GSCOCT00020563001;Parent=GSCOCG00020563001;Name=Cc11_g05880 | |
| 60728 chr11 manual_curation polypeptide 21506871 21513074 . + . ID=GSCOCP00020563001;Dbxref=InterPro:IPR000991,InterPro:IPR001317,InterPro:IPR006220,InterPro:IPR006221,InterPro:IPR011702,InterPro:IPR017926,PFAM:PF00117,PRINTS:PR00096,PRINTS:PR00097,PRINTS:PR00099,PROFILE:PS51273,SwissProt:P48261,SwissProt:P51362,SwissProt:Q08654,TAIR:AT1G24909.1,TAIR:AT1G25155.1,TAIR:AT5G57890.1,TIGRFAMs:TIGR00566,TrEMBL:B9HVR6,TrEMBL:B9SNH9,TrEMBL:D7KAK0;Derives_from=GSCOCT00020563001;Name=Cc11_g05880;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004049,GO:0006541,GO:0008152,GO:0009058,CC_EC_number:4.1.3.27,PRODUCT:Anthranilate synthase component II,CC_functional_completeness:modules,CC_gene:trpG,CC_gene:trpGD;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020563001~ Anthranilate synthase component II~ trpG~ modules;original_location=join(1779661..1779939%2C1780032..1780102%2C1780489..1780526%2C1780635..1780745%2C1781597..1781696%2C1782645..1782780%2C1785760..1785864);owner=coffea | |
| 60729 chr11 manual_curation exon 21506648 21507149 . + . Parent=GSCOCT00020563001 | |
| 60730 chr11 manual_curation exon 21507242 21507312 . + . Parent=GSCOCT00020563001 | |
| 60731 chr11 manual_curation exon 21507699 21507736 . + . Parent=GSCOCT00020563001 | |
| 60732 chr11 manual_curation exon 21507845 21507955 . + . Parent=GSCOCT00020563001 | |
| 60733 chr11 manual_curation exon 21508807 21508906 . + . Parent=GSCOCT00020563001 | |
| 60734 chr11 manual_curation exon 21509855 21509990 . + . Parent=GSCOCT00020563001 | |
| 60735 chr11 manual_curation exon 21512970 21513410 . + . Parent=GSCOCT00020563001 | |
| 60736 chr11 manual_curation CDS 21506871 21507149 . + 0 Parent=GSCOCT00020563001 | |
| 60737 chr11 manual_curation CDS 21507242 21507312 . + 0 Parent=GSCOCT00020563001 | |
| 60738 chr11 manual_curation CDS 21507699 21507736 . + 2 Parent=GSCOCT00020563001 | |
| 60739 chr11 manual_curation CDS 21507845 21507955 . + 1 Parent=GSCOCT00020563001 | |
| 60740 chr11 manual_curation CDS 21508807 21508906 . + 1 Parent=GSCOCT00020563001 | |
| 60741 chr11 manual_curation CDS 21509855 21509990 . + 2 Parent=GSCOCT00020563001 | |
| 60742 chr11 manual_curation CDS 21512970 21513074 . + 0 Parent=GSCOCT00020563001 | |
| 60743 chr11 manual_curation gene 21514297 21517120 . - . ID=GSCOCG00020564001;Name=Cc11_g05890 | |
| 60744 chr11 manual_curation mRNA 21514297 21517120 . - . ID=GSCOCT00020564001;Parent=GSCOCG00020564001;Name=Cc11_g05890 | |
| 60745 chr11 manual_curation polypeptide 21514297 21516871 . - . ID=GSCOCP00020564001;Dbxref=GENE3D:G3DSA:2.60.120.200,InterPro:IPR000757,InterPro:IPR008985,InterPro:IPR010713,InterPro:IPR013320,PFAM:PF00722,PFAM:PF06955,SUPERFAMILY:SSF49899,SwissProt:Q38908,SwissProt:Q38909,SwissProt:Q8LDS2,TAIR:AT1G14720.1,TAIR:AT1G32170.1,TAIR:AT2G01850.1,TrEMBL:C0IRH2,TrEMBL:I1KKZ1,TrEMBL:Q9AT33;Derives_from=GSCOCT00020564001;Name=Cc11_g05890;Ontology_term=CC_evidence_code:ISS,GO:0005618,GO:0005975,GO:0006073,GO:0016762,GO:0048046,CC_EC_number:2.4.1.207,PRODUCT:Probable xyloglucan endotransglucosylase/hydrolase protein 27,CC_functional_completeness:complete,CC_gene:XTH27,CC_gene:XTH28,CC_gene:XTH30;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020564001~ Probable xyloglucan endotransglucosylase/hydrolase protein 27~ XTH27~ complete;original_location=complement(join(1789481..1789661%2C1789277..1789377%2C1788748..1788956%2C1787087..1787696));owner=coffea | |
| 60746 chr11 manual_curation exon 21514297 21514906 . - . Parent=GSCOCT00020564001 | |
| 60747 chr11 manual_curation exon 21515958 21516166 . - . Parent=GSCOCT00020564001 | |
| 60748 chr11 manual_curation exon 21516487 21516587 . - . Parent=GSCOCT00020564001 | |
| 60749 chr11 manual_curation exon 21516691 21517120 . - . Parent=GSCOCT00020564001 | |
| 60750 chr11 manual_curation CDS 21514297 21514906 . - 2 Parent=GSCOCT00020564001 | |
| 60751 chr11 manual_curation CDS 21515958 21516166 . - 0 Parent=GSCOCT00020564001 | |
| 60752 chr11 manual_curation CDS 21516487 21516587 . - 1 Parent=GSCOCT00020564001 | |
| 60753 chr11 manual_curation CDS 21516691 21516871 . - 0 Parent=GSCOCT00020564001 | |
| 60754 chr11 manual_curation gene 21584562 21584777 . - . ID=GSCOCG00020566001;Name=Cc11_g05900 | |
| 60755 chr11 manual_curation mRNA 21584562 21584777 . - . ID=GSCOCT00020566001;Parent=GSCOCG00020566001;Name=Cc11_g05900 | |
| 60756 chr11 manual_curation polypeptide 21584562 21584777 . - . ID=GSCOCP00020566001;Dbxref=InterPro:IPR001950,PFAM:PF01253,PROFILE:PS50296,SUPERFAMILY:SSF55159,SwissProt:O48650,SwissProt:P41568,SwissProt:Q9SQF4,TAIR:AT1G54290.1,TAIR:AT4G27130.1,TAIR:AT5G54760.1,TrEMBL:Q38JG3;Derives_from=GSCOCT00020566001;Name=Cc11_g05900;Ontology_term=CC_evidence_code:ISS,GO:0003743,GO:0006413,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:At4g27130;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020566001~ Hypothetical protein~ At4g27130~ missing_functional_completeness;original_location=complement(1857352..1857567);owner=coffea | |
| 60757 chr11 manual_curation exon 21584562 21584777 . - . Parent=GSCOCT00020566001 | |
| 60758 chr11 manual_curation CDS 21584562 21584777 . - 0 Parent=GSCOCT00020566001 | |
| 60759 chr11 manual_curation gene 21601945 21608258 . + . ID=GSCOCG00020567001;Name=Cc11_g05910 | |
| 60760 chr11 manual_curation mRNA 21601945 21608258 . + . ID=GSCOCT00020567001;Parent=GSCOCG00020567001;Name=Cc11_g05910 | |
| 60761 chr11 manual_curation polypeptide 21602019 21607888 . + . ID=GSCOCP00020567001;Dbxref=InterPro:IPR021627,PFAM:PF11571,TAIR:AT3G09180.1,TrEMBL:B9IIM1,TrEMBL:B9T2T1,TrEMBL:D7TL37;Derives_from=GSCOCT00020567001;Name=Cc11_g05910;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:CONTAINS InterPro DOMAIN/s,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020567001~ CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med27 (InterPro:IPR021627)%3B Has 112 Blast hits to 112 proteins in 38 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 79%3B Fungi - 0%3B Plants - 23%3B Viruses - 0%3B Other Eukaryotes - 10 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(1874809..1875103%2C1875944..1876109%2C1877948..1878377%2C1880013..1880072%2C1880198..1880266%2C1880380..1880423%2C1880501..1880678);owner=coffea | |
| 60762 chr11 manual_curation exon 21601945 21602313 . + . Parent=GSCOCT00020567001 | |
| 60763 chr11 manual_curation exon 21603154 21603319 . + . Parent=GSCOCT00020567001 | |
| 60764 chr11 manual_curation exon 21605158 21605587 . + . Parent=GSCOCT00020567001 | |
| 60765 chr11 manual_curation exon 21607223 21607282 . + . Parent=GSCOCT00020567001 | |
| 60766 chr11 manual_curation exon 21607408 21607476 . + . Parent=GSCOCT00020567001 | |
| 60767 chr11 manual_curation exon 21607590 21607633 . + . Parent=GSCOCT00020567001 | |
| 60768 chr11 manual_curation exon 21607711 21608258 . + . Parent=GSCOCT00020567001 | |
| 60769 chr11 manual_curation CDS 21602019 21602313 . + 0 Parent=GSCOCT00020567001 | |
| 60770 chr11 manual_curation CDS 21603154 21603319 . + 1 Parent=GSCOCT00020567001 | |
| 60771 chr11 manual_curation CDS 21605158 21605587 . + 2 Parent=GSCOCT00020567001 | |
| 60772 chr11 manual_curation CDS 21607223 21607282 . + 0 Parent=GSCOCT00020567001 | |
| 60773 chr11 manual_curation CDS 21607408 21607476 . + 0 Parent=GSCOCT00020567001 | |
| 60774 chr11 manual_curation CDS 21607590 21607633 . + 0 Parent=GSCOCT00020567001 | |
| 60775 chr11 manual_curation CDS 21607711 21607888 . + 2 Parent=GSCOCT00020567001 | |
| 60776 chr11 manual_curation gene 21610383 21612116 . + . ID=GSCOCG00020568001;Name=Cc11_g05920 | |
| 60777 chr11 manual_curation mRNA 21610383 21612116 . + . ID=GSCOCT00020568001;Parent=GSCOCG00020568001;Name=Cc11_g05920 | |
| 60778 chr11 manual_curation polypeptide 21610476 21612019 . + . ID=GSCOCP00020568001;Dbxref=InterPro:IPR004877,InterPro:IPR006593,PFAM:PF03188,PROFILE:PS50939,SMART:SM00665,SwissProt:A3A9H6,SwissProt:Q67ZF6,SwissProt:Q8L856,TAIR:AT1G14730.1,TAIR:AT4G25570.1,TAIR:AT5G38630.1,TrEMBL:B9HJJ7,TrEMBL:B9HVR8,TrEMBL:D7T8G7;Derives_from=GSCOCT00020568001;Name=Cc11_g05920;Ontology_term=CC_evidence_code:ISS,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Probable transmembrane ascorbate ferrireductase 3,CC_functional_completeness:complete,CC_gene:CYB561C,CC_gene:Os02g0642300,CC_gene:CYB561A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020568001~ Probable transmembrane ascorbate ferrireductase 3~ CYB561C~ complete;original_location=join(1883266..1883418%2C1883509..1883557%2C1883826..1884025%2C1884549..1884809);owner=coffea | |
| 60779 chr11 manual_curation exon 21610383 21610628 . + . Parent=GSCOCT00020568001 | |
| 60780 chr11 manual_curation exon 21610719 21610767 . + . Parent=GSCOCT00020568001 | |
| 60781 chr11 manual_curation exon 21611036 21611235 . + . Parent=GSCOCT00020568001 | |
| 60782 chr11 manual_curation exon 21611759 21612116 . + . Parent=GSCOCT00020568001 | |
| 60783 chr11 manual_curation CDS 21610476 21610628 . + 0 Parent=GSCOCT00020568001 | |
| 60784 chr11 manual_curation CDS 21610719 21610767 . + 0 Parent=GSCOCT00020568001 | |
| 60785 chr11 manual_curation CDS 21611036 21611235 . + 1 Parent=GSCOCT00020568001 | |
| 60786 chr11 manual_curation CDS 21611759 21612019 . + 0 Parent=GSCOCT00020568001 | |
| 60787 chr11 manual_curation gene 21618159 21622036 . + . ID=GSCOCG00020569001;Name=Cc11_g05930 | |
| 60788 chr11 manual_curation mRNA 21618159 21622036 . + . ID=GSCOCT00020569001;Parent=GSCOCG00020569001;Name=Cc11_g05930 | |
| 60789 chr11 manual_curation polypeptide 21618817 21621722 . + . ID=GSCOCP00020569001;Dbxref=InterPro:IPR004877,InterPro:IPR006593,PFAM:PF03188,PROFILE:PS50939,SMART:SM00665,SwissProt:A3A9H6,SwissProt:Q67ZF6,SwissProt:Q9SWS1,TAIR:AT1G14730.1,TAIR:AT4G25570.1,TAIR:AT5G38630.1,TrEMBL:B9SNH6,TrEMBL:D7T8G8,TrEMBL:I1ND59;Derives_from=GSCOCT00020569001;Name=Cc11_g05930;Ontology_term=CC_evidence_code:ISS,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable transmembrane ascorbate ferrireductase 3,CC_functional_completeness:complete,CC_gene:CYB561C,CC_gene:CYB561B,CC_gene:Os02g0642300;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020569001~ Putative Probable transmembrane ascorbate ferrireductase 3~ CYB561C~ complete;original_location=join(1891607..1891765%2C1891879..1891927%2C1893630..1893829%2C1894252..1894512);owner=coffea | |
| 60790 chr11 manual_curation exon 21618159 21618975 . + . Parent=GSCOCT00020569001 | |
| 60791 chr11 manual_curation exon 21619089 21619137 . + . Parent=GSCOCT00020569001 | |
| 60792 chr11 manual_curation exon 21620840 21621039 . + . Parent=GSCOCT00020569001 | |
| 60793 chr11 manual_curation exon 21621462 21622036 . + . Parent=GSCOCT00020569001 | |
| 60794 chr11 manual_curation CDS 21618817 21618975 . + 0 Parent=GSCOCT00020569001 | |
| 60795 chr11 manual_curation CDS 21619089 21619137 . + 0 Parent=GSCOCT00020569001 | |
| 60796 chr11 manual_curation CDS 21620840 21621039 . + 1 Parent=GSCOCT00020569001 | |
| 60797 chr11 manual_curation CDS 21621462 21621722 . + 0 Parent=GSCOCT00020569001 | |
| 60798 chr11 manual_curation gene 21629336 21634574 . - . ID=GSCOCG00020570001;Name=Cc11_g05940 | |
| 60799 chr11 manual_curation mRNA 21629336 21634574 . - . ID=GSCOCT00020570001;Parent=GSCOCG00020570001;Name=Cc11_g05940 | |
| 60800 chr11 manual_curation polypeptide 21629650 21634158 . - . ID=GSCOCP00020570001;Dbxref=InterPro:IPR004082,PFAM:PF07227,PIR:PIRSF025218,PRINTS:PR01544,SwissProt:Q84N38,SwissProt:Q84TI3,SwissProt:Q94B71,TAIR:AT1G14740.1,TAIR:AT3G63500.2,TAIR:AT5G48160.1,TrEMBL:B9SNH5,TrEMBL:F6HFB0,TrEMBL:I1K3D1;Derives_from=GSCOCT00020570001;Name=Cc11_g05940;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein OBERON 3,CC_functional_completeness:complete,CC_gene:OBE3,CC_gene:OBE4,CC_gene:PVIP;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020570001~ Protein OBERON 3~ OBE3~ complete;original_location=complement(join(1906831..1906948%2C1905148..1906782%2C1902440..1903026));owner=coffea | |
| 60801 chr11 manual_curation exon 21634420 21634574 . - . Parent=GSCOCT00020570001 | |
| 60802 chr11 manual_curation exon 21629336 21630236 . - . Parent=GSCOCT00020570001 | |
| 60803 chr11 manual_curation exon 21632358 21633992 . - . Parent=GSCOCT00020570001 | |
| 60804 chr11 manual_curation exon 21634041 21634336 . - . Parent=GSCOCT00020570001 | |
| 60805 chr11 manual_curation CDS 21629650 21630236 . - 1 Parent=GSCOCT00020570001 | |
| 60806 chr11 manual_curation CDS 21632358 21633992 . - 1 Parent=GSCOCT00020570001 | |
| 60807 chr11 manual_curation CDS 21634041 21634158 . - 0 Parent=GSCOCT00020570001 | |
| 60808 chr11 manual_curation gene 21668804 21671083 . + . ID=GSCOCG00020572001;Name=Cc11_g05950 | |
| 60809 chr11 manual_curation mRNA 21668804 21671083 . + . ID=GSCOCT00020572001;Parent=GSCOCG00020572001;Name=Cc11_g05950 | |
| 60810 chr11 manual_curation polypeptide 21668804 21671083 . + . ID=GSCOCP00020572001;Dbxref=InterPro:IPR020683,PROFILE:PS50297,SUPERFAMILY:SSF48403,TAIR:AT3G18670.1,TAIR:AT5G04730.1,TAIR:AT5G35810.1,TrEMBL:G7IFK1,TrEMBL:G7J044,TrEMBL:I1KN41;Derives_from=GSCOCT00020572001;Name=Cc11_g05950;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Ankyrin repeat family protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020572001~ Putative Ankyrin repeat family protein~ unknown_gene~ modules;original_location=join(1941594..1941642%2C1942087..1942197%2C1942696..1943174%2C1943262..1943873);owner=coffea | |
| 60811 chr11 manual_curation exon 21668804 21668852 . + . Parent=GSCOCT00020572001 | |
| 60812 chr11 manual_curation exon 21669297 21669407 . + . Parent=GSCOCT00020572001 | |
| 60813 chr11 manual_curation exon 21669906 21670384 . + . Parent=GSCOCT00020572001 | |
| 60814 chr11 manual_curation exon 21670472 21671083 . + . Parent=GSCOCT00020572001 | |
| 60815 chr11 manual_curation CDS 21668804 21668852 . + 0 Parent=GSCOCT00020572001 | |
| 60816 chr11 manual_curation CDS 21669297 21669407 . + 1 Parent=GSCOCT00020572001 | |
| 60817 chr11 manual_curation CDS 21669906 21670384 . + 1 Parent=GSCOCT00020572001 | |
| 60818 chr11 manual_curation CDS 21670472 21671083 . + 0 Parent=GSCOCT00020572001 | |
| 60819 chr11 manual_curation gene 21697677 21698351 . - . ID=GSCOCG00020573001;Name=Cc11_g05960 | |
| 60820 chr11 manual_curation mRNA 21697677 21698351 . - . ID=GSCOCT00020573001;Parent=GSCOCG00020573001;Name=Cc11_g05960 | |
| 60821 chr11 manual_curation polypeptide 21697677 21698351 . - . ID=GSCOCP00020573001;Dbxref=InterPro:IPR000719,InterPro:IPR011009,InterPro:IPR017442,PFAM:PF00069,PROFILE:PS50011,SUPERFAMILY:SSF56112,SwissProt:C0LGU5,SwissProt:Q93ZS4,SwissProt:Q9LFS4,TAIR:AT1G60800.1,TAIR:AT5G16000.1,TAIR:AT5G45780.1,TrEMBL:B9S8B3,TrEMBL:D7MTB4,TrEMBL:D7TJN4;Derives_from=GSCOCT00020573001;Name=Cc11_g05960;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0005524,GO:0006468,CC_EC_number:missing_EC_number,PRODUCT:Probable LRR receptor-like serine/threonine-protein kinase At5g45780,CC_functional_completeness:fragment,CC_gene:At5g45780,CC_gene:NIK1,CC_gene:NIK3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020573001~ Probable LRR receptor-like serine/threonine-protein kinase At5g45780~ At5g45780~ fragment;original_location=complement(join(1971021..1971141%2C1970467..1970630));owner=coffea | |
| 60822 chr11 manual_curation exon 21697677 21697840 . - . Parent=GSCOCT00020573001 | |
| 60823 chr11 manual_curation exon 21698231 21698351 . - . Parent=GSCOCT00020573001 | |
| 60824 chr11 manual_curation CDS 21697677 21697840 . - 1 Parent=GSCOCT00020573001 | |
| 60825 chr11 manual_curation CDS 21698231 21698351 . - 0 Parent=GSCOCT00020573001 | |
| 60826 chr11 manual_curation gene 21719287 21721944 . + . ID=GSCOCG00020575001;Name=Cc11_g05970 | |
| 60827 chr11 manual_curation mRNA 21719287 21721944 . + . ID=GSCOCT00020575001;Parent=GSCOCG00020575001;Name=Cc11_g05970 | |
| 60828 chr11 manual_curation polypeptide 21719287 21721944 . + . ID=GSCOCP00020575001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q6L3X3,SwissProt:Q6L3Z7,SwissProt:Q6L403,TAIR:AT1G53350.1,TAIR:AT5G35450.1,TAIR:AT5G43470.1,TrEMBL:G8E840,TrEMBL:G8E841,TrEMBL:G8E842;Derives_from=GSCOCT00020575001;Name=Cc11_g05970;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1B-17,CC_functional_completeness:fragment,CC_gene:R1B-17,CC_gene:R1B-14,CC_gene:R1B-8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020575001~ Putative late blight resistance protein homolog R1B-17~ R1B-17~ fragment;original_location=join(1992077..1993614%2C1993672..1994734);owner=coffea | |
| 60829 chr11 manual_curation exon 21719287 21720824 . + . Parent=GSCOCT00020575001 | |
| 60830 chr11 manual_curation exon 21720882 21721944 . + . Parent=GSCOCT00020575001 | |
| 60831 chr11 manual_curation CDS 21719287 21720824 . + 0 Parent=GSCOCT00020575001 | |
| 60832 chr11 manual_curation CDS 21720882 21721944 . + 2 Parent=GSCOCT00020575001 | |
| 60833 chr11 manual_curation gene 21739112 21739436 . - . ID=GSCOCG00020577001;Name=Cc11_g05980 | |
| 60834 chr11 manual_curation mRNA 21739112 21739436 . - . ID=GSCOCT00020577001;Parent=GSCOCG00020577001;Name=Cc11_g05980 | |
| 60835 chr11 manual_curation polypeptide 21739112 21739436 . - . ID=GSCOCP00020577001;Dbxref=InterPro:IPR000039,InterPro:IPR021131,PANTHER:PTHR10934,PFAM:PF00828,SUPERFAMILY:SSF52080,SwissProt:O65729,SwissProt:P42791,SwissProt:Q940B0,TAIR:AT3G05590.1,TAIR:AT5G27850.1,TrEMBL:A9PAJ5,TrEMBL:F6H6W6;Derives_from=GSCOCT00020577001;Name=Cc11_g05980;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:60S ribosomal protein L18-2,CC_functional_completeness:fragment,CC_gene:RPL18B,CC_gene:RPL18C,CC_gene:RPL18;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020577001~ 60S ribosomal protein L18-2~ RPL18B~ fragment;original_location=complement(join(2011971..2012226%2C2011902..2011915));owner=coffea | |
| 60836 chr11 manual_curation exon 21739112 21739125 . - . Parent=GSCOCT00020577001 | |
| 60837 chr11 manual_curation exon 21739181 21739436 . - . Parent=GSCOCT00020577001 | |
| 60838 chr11 manual_curation CDS 21739112 21739125 . - 1 Parent=GSCOCT00020577001 | |
| 60839 chr11 manual_curation CDS 21739181 21739436 . - 0 Parent=GSCOCT00020577001 | |
| 60840 chr11 manual_curation gene 21873590 21876662 . + . ID=GSCOCG00020579001;Name=Cc11_g05990 | |
| 60841 chr11 manual_curation mRNA 21873590 21876662 . + . ID=GSCOCT00020579001;Parent=GSCOCG00020579001;Name=Cc11_g05990 | |
| 60842 chr11 manual_curation polypeptide 21873590 21876662 . + . ID=GSCOCP00020579001;Dbxref=GENE3D:G3DSA:1.25.40.20,InterPro:IPR002110,InterPro:IPR020683,PROFILE:PS50088,PROFILE:PS50297,SMART:SM00248,SUPERFAMILY:SSF48403,SwissProt:Q6AWW5,SwissProt:Q9XZC0,TAIR:AT3G18670.1,TAIR:AT5G04730.1,TAIR:AT5G35810.1,TrEMBL:B9HZF4,TrEMBL:B9ICR0,TrEMBL:Q6L3J5;Derives_from=GSCOCT00020579001;Name=Cc11_g05990;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative ankyrin repeat containing protein%2C identical,CC_functional_completeness:modules,CC_gene:At5g02620;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020579001~ Putative ankyrin repeat containing protein%2C identical~ At5g02620~ modules;original_location=join(2146380..2146872%2C2147094..2147282%2C2147727..2147810%2C2148260..2148738%2C2148841..2149452);owner=coffea | |
| 60843 chr11 manual_curation exon 21873590 21874082 . + . Parent=GSCOCT00020579001 | |
| 60844 chr11 manual_curation exon 21874304 21874492 . + . Parent=GSCOCT00020579001 | |
| 60845 chr11 manual_curation exon 21874937 21875020 . + . Parent=GSCOCT00020579001 | |
| 60846 chr11 manual_curation exon 21875470 21875948 . + . Parent=GSCOCT00020579001 | |
| 60847 chr11 manual_curation exon 21876051 21876662 . + . Parent=GSCOCT00020579001 | |
| 60848 chr11 manual_curation CDS 21873590 21874082 . + 0 Parent=GSCOCT00020579001 | |
| 60849 chr11 manual_curation CDS 21874304 21874492 . + 1 Parent=GSCOCT00020579001 | |
| 60850 chr11 manual_curation CDS 21874937 21875020 . + 1 Parent=GSCOCT00020579001 | |
| 60851 chr11 manual_curation CDS 21875470 21875948 . + 1 Parent=GSCOCT00020579001 | |
| 60852 chr11 manual_curation CDS 21876051 21876662 . + 0 Parent=GSCOCT00020579001 | |
| 60853 chr11 manual_curation gene 21882678 21883570 . + . ID=GSCOCG00020580001;Name=Cc11_g06000 | |
| 60854 chr11 manual_curation mRNA 21882678 21883570 . + . ID=GSCOCT00020580001;Parent=GSCOCG00020580001;Name=Cc11_g06000 | |
| 60855 chr11 manual_curation polypeptide 21882678 21883570 . + . ID=GSCOCP00020580001;Dbxref=GENE3D:G3DSA:1.25.40.20,InterPro:IPR002110,InterPro:IPR020683,PROFILE:PS50088,PROFILE:PS50297,SMART:SM00248,SUPERFAMILY:SSF48403,SwissProt:A5PMU4,SwissProt:Q9XZC0,TrEMBL:A5B3N0,TrEMBL:D7TE19,TrEMBL:Q6L3J5;Derives_from=GSCOCT00020580001;Name=Cc11_g06000;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative ankyrin repeat containing protein%2C identical,CC_functional_completeness:complete,CC_gene:anks1b;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020580001~ Putative ankyrin repeat containing protein%2C identical~ anks1b~ complete;original_location=join(2155468..2155977%2C2156181..2156360);owner=coffea | |
| 60856 chr11 manual_curation exon 21882678 21883187 . + . Parent=GSCOCT00020580001 | |
| 60857 chr11 manual_curation exon 21883391 21883570 . + . Parent=GSCOCT00020580001 | |
| 60858 chr11 manual_curation CDS 21882678 21883187 . + 0 Parent=GSCOCT00020580001 | |
| 60859 chr11 manual_curation CDS 21883391 21883570 . + 0 Parent=GSCOCT00020580001 | |
| 60860 chr11 manual_curation gene 21884660 21885677 . + . ID=GSCOCG00020582001;Name=Cc11_g06010 | |
| 60861 chr11 manual_curation mRNA 21884660 21885677 . + . ID=GSCOCT00020582001;Parent=GSCOCG00020582001;Name=Cc11_g06010 | |
| 60862 chr11 manual_curation polypeptide 21884660 21885496 . + . ID=GSCOCP00020582001;Dbxref=TAIR:AT5G04700.1,TAIR:AT5G04730.1,TAIR:AT5G35810.1,TrEMBL:D7MH20,TrEMBL:G7J044,TrEMBL:Q0KIN5;Derives_from=GSCOCT00020582001;Name=Cc11_g06010;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Ankyrin-repeat containing protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020582001~ Putative Ankyrin-repeat containing protein~ unknown_gene~ fragment;original_location=join(2157450..2157572%2C2157675..2158286);owner=coffea | |
| 60863 chr11 manual_curation exon 21884660 21884782 . + . Parent=GSCOCT00020582001 | |
| 60864 chr11 manual_curation exon 21884885 21885677 . + . Parent=GSCOCT00020582001 | |
| 60865 chr11 manual_curation CDS 21884660 21884782 . + 0 Parent=GSCOCT00020582001 | |
| 60866 chr11 manual_curation CDS 21884885 21885496 . + 0 Parent=GSCOCT00020582001 | |
| 60867 chr11 manual_curation gene 21894735 21895758 . + . ID=GSCOCG00020584001;Name=Cc11_g06020 | |
| 60868 chr11 manual_curation mRNA 21894735 21895758 . + . ID=GSCOCT00020584001;Parent=GSCOCG00020584001;Name=Cc11_g06020 | |
| 60869 chr11 manual_curation polypeptide 21894735 21895758 . + . ID=GSCOCP00020584001;Dbxref=InterPro:IPR020683,PROFILE:PS50297,SUPERFAMILY:SSF48403,TAIR:AT3G18670.1,TAIR:AT5G04730.1,TAIR:AT5G35810.1,TrEMBL:D7U6A7,TrEMBL:G7J044,TrEMBL:Q0KIN5;Derives_from=GSCOCT00020584001;Name=Cc11_g06020;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Ankyrin-repeat containing protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020584001~ Putative Ankyrin-repeat containing protein~ unknown_gene~ fragment;original_location=join(2167525..2167833%2C2167937..2168548);owner=coffea | |
| 60870 chr11 manual_curation exon 21894735 21895043 . + . Parent=GSCOCT00020584001 | |
| 60871 chr11 manual_curation exon 21895147 21895758 . + . Parent=GSCOCT00020584001 | |
| 60872 chr11 manual_curation CDS 21894735 21895043 . + 0 Parent=GSCOCT00020584001 | |
| 60873 chr11 manual_curation CDS 21895147 21895758 . + 0 Parent=GSCOCT00020584001 | |
| 60874 chr11 manual_curation gene 21959847 21963080 . + . ID=GSCOCG00020585001;Name=Cc11_g06030 | |
| 60875 chr11 manual_curation mRNA 21959847 21963080 . + . ID=GSCOCT00020585001;Parent=GSCOCG00020585001;Name=Cc11_g06030 | |
| 60876 chr11 manual_curation polypeptide 21960760 21962884 . + . ID=GSCOCP00020585001;Dbxref=InterPro:IPR020683,SUPERFAMILY:SSF48403,TAIR:AT3G18670.1,TAIR:AT5G04730.1,TAIR:AT5G35810.1,TrEMBL:B9RI93,TrEMBL:G7J044,TrEMBL:Q0KIN5;Derives_from=GSCOCT00020585001;Name=Cc11_g06030;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Ankyrin repeat family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020585001~ Putative Ankyrin repeat family protein~ unknown_gene~ complete;original_location=join(2233550..2233574%2C2234005..2234115%2C2234482..2234960%2C2235063..2235674);owner=coffea | |
| 60877 chr11 manual_curation exon 21959847 21960389 . + . Parent=GSCOCT00020585001 | |
| 60878 chr11 manual_curation exon 21960596 21960784 . + . Parent=GSCOCT00020585001 | |
| 60879 chr11 manual_curation exon 21961215 21961325 . + . Parent=GSCOCT00020585001 | |
| 60880 chr11 manual_curation exon 21961692 21962170 . + . Parent=GSCOCT00020585001 | |
| 60881 chr11 manual_curation exon 21962273 21963080 . + . Parent=GSCOCT00020585001 | |
| 60882 chr11 manual_curation CDS 21960760 21960784 . + 0 Parent=GSCOCT00020585001 | |
| 60883 chr11 manual_curation CDS 21961215 21961325 . + 1 Parent=GSCOCT00020585001 | |
| 60884 chr11 manual_curation CDS 21961692 21962170 . + 1 Parent=GSCOCT00020585001 | |
| 60885 chr11 manual_curation CDS 21962273 21962884 . + 0 Parent=GSCOCT00020585001 | |
| 60886 chr11 manual_curation gene 21963587 21965434 . - . ID=GSCOCG00020586001;Name=Cc11_g06040 | |
| 60887 chr11 manual_curation mRNA 21963587 21965434 . - . ID=GSCOCT00020586001;Parent=GSCOCG00020586001;Name=Cc11_g06040 | |
| 60888 chr11 manual_curation polypeptide 21963587 21965434 . - . ID=GSCOCP00020586001;Dbxref=InterPro:IPR002182,PFAM:PF00931,SwissProt:Q60CZ8,SwissProt:Q6L400,SwissProt:Q6L438,TAIR:AT1G50180.1,TAIR:AT3G46530.1,TAIR:AT3G46730.1,TrEMBL:Q6L421,TrEMBL:Q6L426,TrEMBL:Q6L432;Derives_from=GSCOCT00020586001;Name=Cc11_g06040;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1A-6,CC_functional_completeness:fragment,CC_gene:R1A-6,CC_gene:R1A-10,CC_gene:R1B-16;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020586001~ Putative late blight resistance protein homolog R1A-6~ R1A-6~ fragment;original_location=complement(join(2237463..2238224%2C2236377..2236703));owner=coffea | |
| 60889 chr11 manual_curation exon 21963587 21963913 . - . Parent=GSCOCT00020586001 | |
| 60890 chr11 manual_curation exon 21964673 21965434 . - . Parent=GSCOCT00020586001 | |
| 60891 chr11 manual_curation CDS 21963587 21963913 . - 0 Parent=GSCOCT00020586001 | |
| 60892 chr11 manual_curation CDS 21964673 21965434 . - 0 Parent=GSCOCT00020586001 | |
| 60893 chr11 manual_curation gene 21967695 21971082 . + . ID=GSCOCG00020588001;Name=Cc11_g06050 | |
| 60894 chr11 manual_curation mRNA 21967695 21971082 . + . ID=GSCOCT00020588001;Parent=GSCOCG00020588001;Name=Cc11_g06050 | |
| 60895 chr11 manual_curation polypeptide 21968205 21970901 . + . ID=GSCOCP00020588001;Dbxref=InterPro:IPR020683,PROFILE:PS50297,SUPERFAMILY:SSF48403,TAIR:AT3G18670.1,TAIR:AT5G04730.1,TAIR:AT5G35810.1,TrEMBL:D7U6A7,TrEMBL:F6HLW7,TrEMBL:F6I2F9;Derives_from=GSCOCT00020588001;Name=Cc11_g06050;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Ankyrin-repeat containing protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020588001~ Putative Ankyrin-repeat containing protein~ unknown_gene~ fragment;original_location=join(2240995..2241055%2C2241254..2241442%2C2241811..2241924%2C2242501..2242976%2C2243080..2243691);owner=coffea | |
| 60896 chr11 manual_curation exon 21967695 21968265 . + . Parent=GSCOCT00020588001 | |
| 60897 chr11 manual_curation exon 21968464 21968652 . + . Parent=GSCOCT00020588001 | |
| 60898 chr11 manual_curation exon 21969021 21969134 . + . Parent=GSCOCT00020588001 | |
| 60899 chr11 manual_curation exon 21969711 21970186 . + . Parent=GSCOCT00020588001 | |
| 60900 chr11 manual_curation exon 21970290 21971082 . + . Parent=GSCOCT00020588001 | |
| 60901 chr11 manual_curation CDS 21968205 21968265 . + 0 Parent=GSCOCT00020588001 | |
| 60902 chr11 manual_curation CDS 21968464 21968652 . + 1 Parent=GSCOCT00020588001 | |
| 60903 chr11 manual_curation CDS 21969021 21969134 . + 1 Parent=GSCOCT00020588001 | |
| 60904 chr11 manual_curation CDS 21969711 21970186 . + 1 Parent=GSCOCT00020588001 | |
| 60905 chr11 manual_curation CDS 21970290 21970901 . + 0 Parent=GSCOCT00020588001 | |
| 60906 chr11 manual_curation gene 21993144 21993416 . + . ID=GSCOCG00020590001;Name=Cc11_g06060 | |
| 60907 chr11 manual_curation mRNA 21993144 21993416 . + . ID=GSCOCT00020590001;Parent=GSCOCG00020590001;Name=Cc11_g06060 | |
| 60908 chr11 manual_curation polypeptide 21993144 21993416 . + . ID=GSCOCP00020590001;Dbxref=InterPro:IPR000163,InterPro:IPR001107,PANTHER:PTHR23222,PFAM:PF01145,SwissProt:P84173,SwissProt:Q54GI9,SwissProt:Q9BKU4,TAIR:AT3G27280.2,TAIR:AT5G14300.1,TAIR:AT5G40770.1,TrEMBL:O04361,TrEMBL:Q45Q24,TrEMBL:Q5ECI7;Derives_from=GSCOCT00020590001;Name=Cc11_g06060;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Mitochondrial prohibitin complex protein 1,CC_functional_completeness:fragment,CC_gene:phb-1,CC_gene:phbA,CC_gene:PHB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020590001~ Mitochondrial prohibitin complex protein 1~ phb-1~ fragment;original_location=2265934..2266206;owner=coffea | |
| 60909 chr11 manual_curation exon 21993144 21993416 . + . Parent=GSCOCT00020590001 | |
| 60910 chr11 manual_curation CDS 21993144 21993416 . + 0 Parent=GSCOCT00020590001 | |
| 60911 chr11 manual_curation gene 21994290 21996628 . + . ID=GSCOCG00020591001;Name=Cc11_g06070 | |
| 60912 chr11 manual_curation mRNA 21994290 21996628 . + . ID=GSCOCT00020591001;Parent=GSCOCG00020591001;Name=Cc11_g06070 | |
| 60913 chr11 manual_curation polypeptide 21994290 21996628 . + . ID=GSCOCP00020591001;Dbxref=InterPro:IPR000795,InterPro:IPR015760,PANTHER:PTHR23115:SF41,PFAM:PF00009,SwissProt:B2J955,SwissProt:P57997,SwissProt:Q9SHI1,TAIR:AT1G17220.1,TAIR:AT1G21160.1,TAIR:AT4G11160.1,TrEMBL:A5B2X2,TrEMBL:B9GHX7,TrEMBL:F6H4W1;Derives_from=GSCOCT00020591001;Name=Cc11_g06070;Ontology_term=CC_evidence_code:ISS,GO:0003924,GO:0005525,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:IF2CP,CC_gene:At1g17220,CC_gene:infB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020591001~ Hypothetical protein~ IF2CP~ missing_functional_completeness;original_location=join(2267080..2267180%2C2267286..2267359%2C2267465..2267487%2C2268731..2268763%2C2268915..2269028%2C2269203..2269418);owner=coffea | |
| 60914 chr11 manual_curation exon 21994290 21994390 . + . Parent=GSCOCT00020591001 | |
| 60915 chr11 manual_curation exon 21994496 21994569 . + . Parent=GSCOCT00020591001 | |
| 60916 chr11 manual_curation exon 21994675 21994697 . + . Parent=GSCOCT00020591001 | |
| 60917 chr11 manual_curation exon 21995941 21995973 . + . Parent=GSCOCT00020591001 | |
| 60918 chr11 manual_curation exon 21996125 21996238 . + . Parent=GSCOCT00020591001 | |
| 60919 chr11 manual_curation exon 21996413 21996628 . + . Parent=GSCOCT00020591001 | |
| 60920 chr11 manual_curation CDS 21994290 21994390 . + 0 Parent=GSCOCT00020591001 | |
| 60921 chr11 manual_curation CDS 21994496 21994569 . + 2 Parent=GSCOCT00020591001 | |
| 60922 chr11 manual_curation CDS 21994675 21994697 . + 1 Parent=GSCOCT00020591001 | |
| 60923 chr11 manual_curation CDS 21995941 21995973 . + 0 Parent=GSCOCT00020591001 | |
| 60924 chr11 manual_curation CDS 21996125 21996238 . + 0 Parent=GSCOCT00020591001 | |
| 60925 chr11 manual_curation CDS 21996413 21996628 . + 0 Parent=GSCOCT00020591001 | |
| 60926 chr11 manual_curation gene 22059561 22060395 . + . ID=GSCOCG00020592001;Name=Cc11_g06080 | |
| 60927 chr11 manual_curation mRNA 22059561 22060395 . + . ID=GSCOCT00020592001;Parent=GSCOCG00020592001;Name=Cc11_g06080 | |
| 60928 chr11 manual_curation polypeptide 22059561 22060395 . + . ID=GSCOCP00020592001;Dbxref=InterPro:IPR001254,InterPro:IPR001940,InterPro:IPR009003,PFAM:PF00089,PRINTS:PR00834,SUPERFAMILY:SSF50494,SwissProt:A6VUA4,SwissProt:P45129,SwissProt:Q3E6S8,TAIR:AT5G27660.1,TrEMBL:B6TZ03,TrEMBL:B8BJW6,TrEMBL:I1IM73;Derives_from=GSCOCT00020592001;Name=Cc11_g06080;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004252,GO:0006508,CC_EC_number:missing_EC_number,PRODUCT:Putative protease Do-like 14,CC_functional_completeness:fragment,CC_gene:DEGP14,CC_gene:Mmwyl1_1102,CC_gene:HI_1259;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020592001~ Putative protease Do-like 14~ DEGP14~ fragment;original_location=join(2332351..2332476%2C2332621..2332832%2C2332939..2333029%2C2333126..2333185);owner=coffea | |
| 60929 chr11 manual_curation exon 22059561 22059686 . + . Parent=GSCOCT00020592001 | |
| 60930 chr11 manual_curation exon 22059831 22060042 . + . Parent=GSCOCT00020592001 | |
| 60931 chr11 manual_curation exon 22060149 22060239 . + . Parent=GSCOCT00020592001 | |
| 60932 chr11 manual_curation exon 22060336 22060395 . + . Parent=GSCOCT00020592001 | |
| 60933 chr11 manual_curation CDS 22059561 22059686 . + 0 Parent=GSCOCT00020592001 | |
| 60934 chr11 manual_curation CDS 22059831 22060042 . + 0 Parent=GSCOCT00020592001 | |
| 60935 chr11 manual_curation CDS 22060149 22060239 . + 2 Parent=GSCOCT00020592001 | |
| 60936 chr11 manual_curation CDS 22060336 22060395 . + 0 Parent=GSCOCT00020592001 | |
| 60937 chr11 manual_curation gene 22080216 22084661 . - . ID=GSCOCG00020595001;Name=Cc11_g06090 | |
| 60938 chr11 manual_curation mRNA 22080216 22084661 . - . ID=GSCOCT00020595001;Parent=GSCOCG00020595001;Name=Cc11_g06090 | |
| 60939 chr11 manual_curation polypeptide 22080216 22084482 . - . ID=GSCOCP00020595001;Dbxref=InterPro:IPR000582,PFAM:PF00887,SUPERFAMILY:SSF47027;Derives_from=GSCOCT00020595001;Name=Cc11_g06090;Ontology_term=CC_evidence_code:ISS,GO:0000062,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020595001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(2357039..2357272%2C2356825..2356901%2C2356443..2356506%2C2356285..2356356%2C2355341..2355416%2C2353006..2353100));owner=coffea | |
| 60940 chr11 manual_curation exon 22080216 22080310 . - . Parent=GSCOCT00020595001 | |
| 60941 chr11 manual_curation exon 22082551 22082626 . - . Parent=GSCOCT00020595001 | |
| 60942 chr11 manual_curation exon 22083495 22083566 . - . Parent=GSCOCT00020595001 | |
| 60943 chr11 manual_curation exon 22083653 22083716 . - . Parent=GSCOCT00020595001 | |
| 60944 chr11 manual_curation exon 22084035 22084111 . - . Parent=GSCOCT00020595001 | |
| 60945 chr11 manual_curation exon 22084249 22084661 . - . Parent=GSCOCT00020595001 | |
| 60946 chr11 manual_curation CDS 22080216 22080310 . - 1 Parent=GSCOCT00020595001 | |
| 60947 chr11 manual_curation CDS 22082551 22082626 . - 0 Parent=GSCOCT00020595001 | |
| 60948 chr11 manual_curation CDS 22083495 22083566 . - 0 Parent=GSCOCT00020595001 | |
| 60949 chr11 manual_curation CDS 22083653 22083716 . - 2 Parent=GSCOCT00020595001 | |
| 60950 chr11 manual_curation CDS 22084035 22084111 . - 0 Parent=GSCOCT00020595001 | |
| 60951 chr11 manual_curation CDS 22084249 22084482 . - 0 Parent=GSCOCT00020595001 | |
| 60952 chr11 manual_curation gene 22155545 22155712 . - . ID=GSCOCG00020601001;Name=Cc11_g06100 | |
| 60953 chr11 manual_curation mRNA 22155545 22155712 . - . ID=GSCOCT00020601001;Parent=GSCOCG00020601001;Name=Cc11_g06100 | |
| 60954 chr11 manual_curation polypeptide 22155545 22155712 . - . ID=GSCOCP00020601001;Dbxref=InterPro:IPR002325,PFAM:PF01333,PRINTS:PR00610,PROFILE:PS51010,SwissProt:B2Y1X2,SwissProt:P06669,SwissProt:Q49KY5,TAIR:ATCG00540.1,TrEMBL:D7P303,TrEMBL:E3UGX4,TrEMBL:G8HSN5;Derives_from=GSCOCT00020601001;Name=Cc11_g06100;Ontology_term=CC_evidence_code:ISS,GO:0005506,GO:0009055,GO:0015979,GO:0020037,GO:0031361,CC_EC_number:missing_EC_number,PRODUCT:Apocytochrome f,CC_functional_completeness:fragment,CC_gene:petA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020601001~ Apocytochrome f~ petA~ fragment;original_location=complement(2428335..2428502);owner=coffea | |
| 60955 chr11 manual_curation exon 22155545 22155712 . - . Parent=GSCOCT00020601001 | |
| 60956 chr11 manual_curation CDS 22155545 22155712 . - 0 Parent=GSCOCT00020601001 | |
| 60957 chr11 manual_curation gene 22183127 22186636 . + . ID=GSCOCG00020602001;Name=Cc11_g06110 | |
| 60958 chr11 manual_curation mRNA 22183127 22186636 . + . ID=GSCOCT00020602001;Parent=GSCOCG00020602001;Name=Cc11_g06110 | |
| 60959 chr11 manual_curation polypeptide 22183127 22186636 . + . ID=GSCOCP00020602001;Dbxref=InterPro:IPR002528,InterPro:IPR015521,PANTHER:PTHR11206,PANTHER:PTHR11206:SF11,PFAM:PF01554,SwissProt:Q8RWF5,SwissProt:Q9SIA4,SwissProt:Q9SIA5,TAIR:AT1G15150.1,TAIR:AT1G66760.2,TAIR:AT1G71140.1,TIGRFAMs:TIGR00797,TrEMBL:A5ARU5,TrEMBL:B9HWA4,TrEMBL:F6HFL1;Derives_from=GSCOCT00020602001;Name=Cc11_g06110;Ontology_term=CC_evidence_code:ISS,GO:0006855,GO:0015238,GO:0015297,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Putative MATE efflux family protein 9,CC_functional_completeness:complete,CC_gene:DTXL5,CC_gene:DTXL1,CC_gene:DTX1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020602001~ Putative MATE efflux family protein 9~ DTXL5~ complete;original_location=join(2455917..2456162%2C2457144..2457688%2C2457779..2457865%2C2457948..2458004%2C2458129..2458367%2C2458678..2458740%2C2458976..2459205%2C2459367..2459426);owner=coffea | |
| 60960 chr11 manual_curation exon 22183127 22183372 . + . Parent=GSCOCT00020602001 | |
| 60961 chr11 manual_curation exon 22184354 22184898 . + . Parent=GSCOCT00020602001 | |
| 60962 chr11 manual_curation exon 22184989 22185075 . + . Parent=GSCOCT00020602001 | |
| 60963 chr11 manual_curation exon 22185158 22185214 . + . Parent=GSCOCT00020602001 | |
| 60964 chr11 manual_curation exon 22185339 22185577 . + . Parent=GSCOCT00020602001 | |
| 60965 chr11 manual_curation exon 22185888 22185950 . + . Parent=GSCOCT00020602001 | |
| 60966 chr11 manual_curation exon 22186186 22186415 . + . Parent=GSCOCT00020602001 | |
| 60967 chr11 manual_curation exon 22186577 22186636 . + . Parent=GSCOCT00020602001 | |
| 60968 chr11 manual_curation CDS 22183127 22183372 . + 0 Parent=GSCOCT00020602001 | |
| 60969 chr11 manual_curation CDS 22184354 22184898 . + 0 Parent=GSCOCT00020602001 | |
| 60970 chr11 manual_curation CDS 22184989 22185075 . + 2 Parent=GSCOCT00020602001 | |
| 60971 chr11 manual_curation CDS 22185158 22185214 . + 2 Parent=GSCOCT00020602001 | |
| 60972 chr11 manual_curation CDS 22185339 22185577 . + 2 Parent=GSCOCT00020602001 | |
| 60973 chr11 manual_curation CDS 22185888 22185950 . + 1 Parent=GSCOCT00020602001 | |
| 60974 chr11 manual_curation CDS 22186186 22186415 . + 1 Parent=GSCOCT00020602001 | |
| 60975 chr11 manual_curation CDS 22186577 22186636 . + 0 Parent=GSCOCT00020602001 | |
| 60976 chr11 manual_curation gene 22214703 22217446 . + . ID=GSCOCG00020605001;Name=Cc11_g06120 | |
| 60977 chr11 manual_curation mRNA 22214703 22217446 . + . ID=GSCOCT00020605001;Parent=GSCOCG00020605001;Name=Cc11_g06120 | |
| 60978 chr11 manual_curation polypeptide 22214819 22217446 . + . ID=GSCOCP00020605001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q6L3Z7,SwissProt:Q6L403,SwissProt:Q6L438,TAIR:AT3G46530.1,TAIR:AT3G46710.1,TAIR:AT5G35450.1,TrEMBL:G8E840,TrEMBL:G8E841,TrEMBL:G8E842;Derives_from=GSCOCT00020605001;Name=Cc11_g06120;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1B-17,CC_functional_completeness:fragment,CC_gene:R1B-17,CC_gene:R1B-14,CC_gene:R1A-6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020605001~ Putative late blight resistance protein homolog R1B-17~ R1B-17~ fragment;original_location=2487609..2490236;owner=coffea | |
| 60979 chr11 manual_curation exon 22214703 22217446 . + . Parent=GSCOCT00020605001 | |
| 60980 chr11 manual_curation CDS 22214819 22217446 . + 0 Parent=GSCOCT00020605001 | |
| 60981 chr11 manual_curation gene 22218281 22219123 . - . ID=GSCOCG00020606001;Name=Cc11_g06130 | |
| 60982 chr11 manual_curation mRNA 22218281 22219123 . - . ID=GSCOCT00020606001;Parent=GSCOCG00020606001;Name=Cc11_g06130 | |
| 60983 chr11 manual_curation polypeptide 22218375 22219123 . - . ID=GSCOCP00020606001;Derives_from=GSCOCT00020606001;Name=Cc11_g06130;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020606001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(2491684..2491913%2C2491165..2491222));owner=coffea | |
| 60984 chr11 manual_curation exon 22218281 22218432 . - . Parent=GSCOCT00020606001 | |
| 60985 chr11 manual_curation exon 22218894 22219123 . - . Parent=GSCOCT00020606001 | |
| 60986 chr11 manual_curation CDS 22218375 22218432 . - 2 Parent=GSCOCT00020606001 | |
| 60987 chr11 manual_curation CDS 22218894 22219123 . - 0 Parent=GSCOCT00020606001 | |
| 60988 chr11 manual_curation gene 22234991 22236382 . - . ID=GSCOCG00020608001;Name=Cc11_g06140 | |
| 60989 chr11 manual_curation mRNA 22234991 22236382 . - . ID=GSCOCT00020608001;Parent=GSCOCG00020608001;Name=Cc11_g06140 | |
| 60990 chr11 manual_curation polypeptide 22234991 22236382 . - . ID=GSCOCP00020608001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,PROSITE:PS00375,SwissProt:Q5NTH0,SwissProt:Q66PF2,SwissProt:Q8GVE3,TAIR:AT4G27570.1,TAIR:AT5G49690.1,TAIR:AT5G65550.1,TrEMBL:B6EWZ0,TrEMBL:F6HIX7,TrEMBL:F6I5W2;Derives_from=GSCOCT00020608001;Name=Cc11_g06140;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:Putative Flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltransferase,CC_functional_completeness:complete,CC_gene:C12RT1,CC_gene:UGAT,CC_gene:GT4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020608001~ Putative Flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltransferase~ C12RT1~ complete;original_location=complement(join(2508702..2509172%2C2507781..2508614));owner=coffea | |
| 60991 chr11 manual_curation exon 22234991 22235824 . - . Parent=GSCOCT00020608001 | |
| 60992 chr11 manual_curation exon 22235912 22236382 . - . Parent=GSCOCT00020608001 | |
| 60993 chr11 manual_curation CDS 22234991 22235824 . - 0 Parent=GSCOCT00020608001 | |
| 60994 chr11 manual_curation CDS 22235912 22236382 . - 0 Parent=GSCOCT00020608001 | |
| 60995 chr11 manual_curation gene 22257533 22257871 . - . ID=GSCOCG00020609001;Name=Cc11_g06150 | |
| 60996 chr11 manual_curation mRNA 22257533 22257871 . - . ID=GSCOCT00020609001;Parent=GSCOCG00020609001;Name=Cc11_g06150 | |
| 60997 chr11 manual_curation polypeptide 22257533 22257871 . - . ID=GSCOCP00020609001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,SwissProt:Q5NTH0,SwissProt:Q8GVE3,SwissProt:Q9LSM0,TAIR:AT1G01420.1,TAIR:AT1G22400.1,TAIR:AT5G65550.1,TrEMBL:C5NN14,TrEMBL:F4YF67,TrEMBL:F6HIX7;Derives_from=GSCOCT00020609001;Name=Cc11_g06150;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:Putative Cyanidin-3-O-glucoside 2-O-glucuronosyltransferase,CC_functional_completeness:fragment,CC_gene:UGAT,CC_gene:C12RT1,CC_gene:UGT91B1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020609001~ Putative Cyanidin-3-O-glucoside 2-O-glucuronosyltransferase~ UGAT~ fragment;original_location=complement(2530323..2530661);owner=coffea | |
| 60998 chr11 manual_curation exon 22257533 22257871 . - . Parent=GSCOCT00020609001 | |
| 60999 chr11 manual_curation CDS 22257533 22257871 . - 0 Parent=GSCOCT00020609001 | |
| 61000 chr11 manual_curation gene 22278403 22281951 . + . ID=GSCOCG00020610001;Name=Cc11_g06160 | |
| 61001 chr11 manual_curation mRNA 22278403 22281951 . + . ID=GSCOCT00020610001;Parent=GSCOCG00020610001;Name=Cc11_g06160 | |
| 61002 chr11 manual_curation polypeptide 22278403 22281951 . + . ID=GSCOCP00020610001;Dbxref=InterPro:IPR002528,InterPro:IPR015521,PANTHER:PTHR11206,PANTHER:PTHR11206:SF11,PFAM:PF01554,SwissProt:Q8RWF5,SwissProt:Q9SIA4,SwissProt:Q9SIA5,TAIR:AT1G15150.1,TAIR:AT1G15170.1,TAIR:AT1G71140.1,TIGRFAMs:TIGR00797,TrEMBL:A5ARU5,TrEMBL:F6HFL1,TrEMBL:I1KFS3;Derives_from=GSCOCT00020610001;Name=Cc11_g06160;Ontology_term=CC_evidence_code:ISS,GO:0006855,GO:0015238,GO:0015297,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:MATE efflux family protein DTX1,CC_functional_completeness:fragment,CC_gene:DTX1,CC_gene:DTXL1,CC_gene:DTXL5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020610001~ MATE efflux family protein DTX1~ DTX1~ fragment;original_location=join(2551193..2551219%2C2552559..2553118%2C2553209..2553295%2C2553378..2553434%2C2553567..2553805%2C2554446..2554741);owner=coffea | |
| 61003 chr11 manual_curation exon 22278403 22278429 . + . Parent=GSCOCT00020610001 | |
| 61004 chr11 manual_curation exon 22279769 22280328 . + . Parent=GSCOCT00020610001 | |
| 61005 chr11 manual_curation exon 22280419 22280505 . + . Parent=GSCOCT00020610001 | |
| 61006 chr11 manual_curation exon 22280588 22280644 . + . Parent=GSCOCT00020610001 | |
| 61007 chr11 manual_curation exon 22280777 22281015 . + . Parent=GSCOCT00020610001 | |
| 61008 chr11 manual_curation exon 22281656 22281951 . + . Parent=GSCOCT00020610001 | |
| 61009 chr11 manual_curation CDS 22278403 22278429 . + 0 Parent=GSCOCT00020610001 | |
| 61010 chr11 manual_curation CDS 22279769 22280328 . + 0 Parent=GSCOCT00020610001 | |
| 61011 chr11 manual_curation CDS 22280419 22280505 . + 2 Parent=GSCOCT00020610001 | |
| 61012 chr11 manual_curation CDS 22280588 22280644 . + 2 Parent=GSCOCT00020610001 | |
| 61013 chr11 manual_curation CDS 22280777 22281015 . + 2 Parent=GSCOCT00020610001 | |
| 61014 chr11 manual_curation CDS 22281656 22281951 . + 1 Parent=GSCOCT00020610001 | |
| 61015 chr11 manual_curation gene 22312612 22313462 . + . ID=GSCOCG00020614001;Name=Cc11_g06170 | |
| 61016 chr11 manual_curation mRNA 22312612 22313462 . + . ID=GSCOCT00020614001;Parent=GSCOCG00020614001;Name=Cc11_g06170 | |
| 61017 chr11 manual_curation polypeptide 22312612 22313462 . + . ID=GSCOCP00020614001;Dbxref=InterPro:IPR002528,InterPro:IPR015521,PANTHER:PTHR11206,PANTHER:PTHR11206:SF11,SwissProt:Q8RWF5,SwissProt:Q9SIA1,SwissProt:Q9SIA5,TAIR:AT1G15150.1,TAIR:AT1G15160.1,TAIR:AT1G15170.1,TrEMBL:A5B1C0,TrEMBL:B4FRU5,TrEMBL:F6HSN6;Derives_from=GSCOCT00020614001;Name=Cc11_g06170;Ontology_term=CC_evidence_code:ISS,GO:0006855,GO:0015238,GO:0015297,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Putative MATE efflux family protein DTX1,CC_functional_completeness:fragment,CC_gene:DTXL5,CC_gene:DTX1,CC_gene:DTXL4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020614001~ Putative MATE efflux family protein DTX1~ DTXL5~ fragment;original_location=join(2585402..2585484%2C2585761..2586031%2C2586193..2586252);owner=coffea | |
| 61018 chr11 manual_curation exon 22312612 22312694 . + . Parent=GSCOCT00020614001 | |
| 61019 chr11 manual_curation exon 22312971 22313241 . + . Parent=GSCOCT00020614001 | |
| 61020 chr11 manual_curation exon 22313403 22313462 . + . Parent=GSCOCT00020614001 | |
| 61021 chr11 manual_curation CDS 22312612 22312694 . + 0 Parent=GSCOCT00020614001 | |
| 61022 chr11 manual_curation CDS 22312971 22313241 . + 2 Parent=GSCOCT00020614001 | |
| 61023 chr11 manual_curation CDS 22313403 22313462 . + 0 Parent=GSCOCT00020614001 | |
| 61024 chr11 manual_curation gene 22318498 22321644 . - . ID=GSCOCG00020617001;Name=Cc11_g06180 | |
| 61025 chr11 manual_curation mRNA 22318498 22321644 . - . ID=GSCOCT00020617001;Parent=GSCOCG00020617001;Name=Cc11_g06180 | |
| 61026 chr11 manual_curation polypeptide 22318498 22321644 . - . ID=GSCOCP00020617001;Dbxref=GENE3D:G3DSA:1.25.40.20,InterPro:IPR002110,InterPro:IPR020683,PROFILE:PS50088,PROFILE:PS50297,SMART:SM00248,SUPERFAMILY:SSF48403,SwissProt:Q9XZC0,TAIR:AT3G18670.1,TAIR:AT5G04730.1,TAIR:AT5G35810.1,TrEMBL:B9HZF4,TrEMBL:F6I2F9,TrEMBL:Q6L3J5;Derives_from=GSCOCT00020617001;Name=Cc11_g06180;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Ankyrin repeat family protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020617001~ Putative Ankyrin repeat family protein~ unknown_gene~ modules;original_location=complement(join(2593942..2594434%2C2593532..2593720%2C2592987..2593097%2C2592001..2592479%2C2591288..2591899));owner=coffea | |
| 61027 chr11 manual_curation exon 22318498 22319109 . - . Parent=GSCOCT00020617001 | |
| 61028 chr11 manual_curation exon 22319211 22319689 . - . Parent=GSCOCT00020617001 | |
| 61029 chr11 manual_curation exon 22320197 22320307 . - . Parent=GSCOCT00020617001 | |
| 61030 chr11 manual_curation exon 22320742 22320930 . - . Parent=GSCOCT00020617001 | |
| 61031 chr11 manual_curation exon 22321152 22321644 . - . Parent=GSCOCT00020617001 | |
| 61032 chr11 manual_curation CDS 22318498 22319109 . - 0 Parent=GSCOCT00020617001 | |
| 61033 chr11 manual_curation CDS 22319211 22319689 . - 1 Parent=GSCOCT00020617001 | |
| 61034 chr11 manual_curation CDS 22320197 22320307 . - 1 Parent=GSCOCT00020617001 | |
| 61035 chr11 manual_curation CDS 22320742 22320930 . - 1 Parent=GSCOCT00020617001 | |
| 61036 chr11 manual_curation CDS 22321152 22321644 . - 0 Parent=GSCOCT00020617001 | |
| 61037 chr11 manual_curation gene 22337936 22341211 . + . ID=GSCOCG00020620001;Name=Cc11_g06190 | |
| 61038 chr11 manual_curation mRNA 22337936 22341211 . + . ID=GSCOCT00020620001;Parent=GSCOCG00020620001;Name=Cc11_g06190 | |
| 61039 chr11 manual_curation polypeptide 22337936 22341211 . + . ID=GSCOCP00020620001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q6L3Z7,SwissProt:Q6L400,SwissProt:Q6L403,TAIR:AT3G46530.1,TAIR:AT3G46730.1,TAIR:AT5G35450.1,TrEMBL:G8E840,TrEMBL:G8E841,TrEMBL:G8E842;Derives_from=GSCOCT00020620001;Name=Cc11_g06190;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative NB-ARC domain-containing disease resistance protein,CC_functional_completeness:modules,CC_gene:R1B-17,CC_gene:R1B-14,CC_gene:R1B-16;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020620001~ Putative NB-ARC domain-containing disease resistance protein~ R1B-17~ modules;original_location=join(2610726..2611173%2C2611222..2611976%2C2612037..2613267%2C2613373..2614001);owner=coffea | |
| 61040 chr11 manual_curation exon 22337936 22338383 . + . Parent=GSCOCT00020620001 | |
| 61041 chr11 manual_curation exon 22338432 22339186 . + . Parent=GSCOCT00020620001 | |
| 61042 chr11 manual_curation exon 22339247 22340477 . + . Parent=GSCOCT00020620001 | |
| 61043 chr11 manual_curation exon 22340583 22341211 . + . Parent=GSCOCT00020620001 | |
| 61044 chr11 manual_curation CDS 22337936 22338383 . + 0 Parent=GSCOCT00020620001 | |
| 61045 chr11 manual_curation CDS 22338432 22339186 . + 1 Parent=GSCOCT00020620001 | |
| 61046 chr11 manual_curation CDS 22339247 22340477 . + 0 Parent=GSCOCT00020620001 | |
| 61047 chr11 manual_curation CDS 22340583 22341211 . + 1 Parent=GSCOCT00020620001 | |
| 61048 chr11 manual_curation gene 22344673 22346449 . - . ID=GSCOCG00020621001;Name=Cc11_g06200 | |
| 61049 chr11 manual_curation mRNA 22344673 22346449 . - . ID=GSCOCT00020621001;Parent=GSCOCG00020621001;Name=Cc11_g06200 | |
| 61050 chr11 manual_curation polypeptide 22344673 22346449 . - . ID=GSCOCP00020621001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:A6YIH8,SwissProt:O81974,SwissProt:Q42600,TAIR:AT4G36220.1,TAIR:AT5G04330.1,TAIR:AT5G07990.1,TrEMBL:E0WCK5,TrEMBL:Q6IV45,TrEMBL:Q6PLI4;Derives_from=GSCOCT00020621001;Name=Cc11_g06200;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.21,PRODUCT:Cytochrome P450 84A1,CC_functional_completeness:complete,CC_gene:CYP84A1,CC_gene:CYP71D55,CC_gene:CYP71D8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020621001~ Cytochrome P450 84A1~ CYP84A1~ complete;original_location=complement(join(2618319..2619239%2C2617463..2618020));owner=coffea | |
| 61051 chr11 manual_curation exon 22344673 22345230 . - . Parent=GSCOCT00020621001 | |
| 61052 chr11 manual_curation exon 22345529 22346449 . - . Parent=GSCOCT00020621001 | |
| 61053 chr11 manual_curation CDS 22344673 22345230 . - 0 Parent=GSCOCT00020621001 | |
| 61054 chr11 manual_curation CDS 22345529 22346449 . - 0 Parent=GSCOCT00020621001 | |
| 61055 chr11 manual_curation gene 22371372 22371608 . + . ID=GSCOCG00020625001;Name=Cc11_g06210 | |
| 61056 chr11 manual_curation mRNA 22371372 22371608 . + . ID=GSCOCT00020625001;Parent=GSCOCG00020625001;Name=Cc11_g06210 | |
| 61057 chr11 manual_curation polypeptide 22371372 22371608 . + . ID=GSCOCP00020625001;Dbxref=InterPro:IPR002182,PFAM:PF00931,TrEMBL:G8E840,TrEMBL:G8E841,TrEMBL:G8E842;Derives_from=GSCOCT00020625001;Name=Cc11_g06210;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein Rx4,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020625001~ Putative uncharacterized protein Rx4~ unknown_gene~ fragment;original_location=2644162..2644398;owner=coffea | |
| 61058 chr11 manual_curation exon 22371372 22371608 . + . Parent=GSCOCT00020625001 | |
| 61059 chr11 manual_curation CDS 22371372 22371608 . + 0 Parent=GSCOCT00020625001 | |
| 61060 chr11 manual_curation gene 22371666 22372006 . + . ID=GSCOCG00020626001;Name=Cc11_g06220 | |
| 61061 chr11 manual_curation mRNA 22371666 22372006 . + . ID=GSCOCT00020626001;Parent=GSCOCG00020626001;Name=Cc11_g06220 | |
| 61062 chr11 manual_curation polypeptide 22371666 22372006 . + . ID=GSCOCP00020626001;Dbxref=InterPro:IPR002182,PFAM:PF00931;Derives_from=GSCOCT00020626001;Name=Cc11_g06220;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020626001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(2644456..2644509%2C2644647..2644796);owner=coffea | |
| 61063 chr11 manual_curation exon 22371666 22371719 . + . Parent=GSCOCT00020626001 | |
| 61064 chr11 manual_curation exon 22371857 22372006 . + . Parent=GSCOCT00020626001 | |
| 61065 chr11 manual_curation CDS 22371666 22371719 . + 0 Parent=GSCOCT00020626001 | |
| 61066 chr11 manual_curation CDS 22371857 22372006 . + 0 Parent=GSCOCT00020626001 | |
| 61067 chr11 manual_curation gene 22373172 22374152 . - . ID=GSCOCG00020627001;Name=Cc11_g06230 | |
| 61068 chr11 manual_curation mRNA 22373172 22374152 . - . ID=GSCOCT00020627001;Parent=GSCOCG00020627001;Name=Cc11_g06230 | |
| 61069 chr11 manual_curation polypeptide 22373409 22374152 . - . ID=GSCOCP00020627001;Dbxref=InterPro:IPR007087,PROFILE:PS50157,PROSITE:PS00028,SwissProt:Q39263,SwissProt:Q39266,SwissProt:Q42485,TAIR:AT1G24625.1,TAIR:AT1G66140.1,TAIR:AT1G80730.1,TrEMBL:B9HJJ4,TrEMBL:B9HVS1,TrEMBL:F6HFB1;Derives_from=GSCOCT00020627001;Name=Cc11_g06230;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative Zinc finger protein 4,CC_functional_completeness:complete,CC_gene:ZFP4,CC_gene:ZFP7,CC_gene:ZFP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020627001~ Putative Zinc finger protein 4~ ZFP4~ complete;original_location=complement(2646199..2646942);owner=coffea | |
| 61070 chr11 manual_curation exon 22373172 22374152 . - . Parent=GSCOCT00020627001 | |
| 61071 chr11 manual_curation CDS 22373409 22374152 . - 0 Parent=GSCOCT00020627001 | |
| 61072 chr11 manual_curation gene 22374220 22376262 . - . ID=GSCOCG00020628001;Name=Cc11_g06240 | |
| 61073 chr11 manual_curation mRNA 22374220 22376262 . - . ID=GSCOCT00020628001;Parent=GSCOCG00020628001;Name=Cc11_g06240 | |
| 61074 chr11 manual_curation polypeptide 22374220 22376262 . - . ID=GSCOCP00020628001;Derives_from=GSCOCT00020628001;Name=Cc11_g06240;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020628001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(2649015..2649052%2C2647010..2647031));owner=coffea | |
| 61075 chr11 manual_curation exon 22374220 22374241 . - . Parent=GSCOCT00020628001 | |
| 61076 chr11 manual_curation exon 22376225 22376262 . - . Parent=GSCOCT00020628001 | |
| 61077 chr11 manual_curation CDS 22374220 22374241 . - 2 Parent=GSCOCT00020628001 | |
| 61078 chr11 manual_curation CDS 22376225 22376262 . - 0 Parent=GSCOCT00020628001 | |
| 61079 chr11 manual_curation gene 22393027 22394376 . + . ID=GSCOCG00020631001;Name=Cc11_g06250 | |
| 61080 chr11 manual_curation mRNA 22393027 22394376 . + . ID=GSCOCT00020631001;Parent=GSCOCG00020631001;Name=Cc11_g06250 | |
| 61081 chr11 manual_curation polypeptide 22393027 22394376 . + . ID=GSCOCP00020631001;Dbxref=GENE3D:G3DSA:2.60.40.420,InterPro:IPR003245,InterPro:IPR008972,PFAM:PF02298,PRODOM:PD003122,SUPERFAMILY:SSF49503,SwissProt:P00302,SwissProt:P80728,SwissProt:Q41001,TAIR:AT2G32300.1,TAIR:AT5G07475.1,TAIR:AT5G26330.1,TrEMBL:B9NHG1,TrEMBL:B9P4V8,TrEMBL:D7U759;Derives_from=GSCOCT00020631001;Name=Cc11_g06250;Ontology_term=CC_evidence_code:ISS,GO:0005507,GO:0009055,CC_EC_number:missing_EC_number,PRODUCT:Putative Stellacyanin,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020631001~ Putative Stellacyanin~ unknown_gene~ modules;original_location=join(2665817..2665976%2C2666784..2667166);owner=coffea | |
| 61082 chr11 manual_curation exon 22393027 22393186 . + . Parent=GSCOCT00020631001 | |
| 61083 chr11 manual_curation exon 22393994 22394376 . + . Parent=GSCOCT00020631001 | |
| 61084 chr11 manual_curation CDS 22393027 22393186 . + 0 Parent=GSCOCT00020631001 | |
| 61085 chr11 manual_curation CDS 22393994 22394376 . + 1 Parent=GSCOCT00020631001 | |
| 61086 chr11 manual_curation gene 22409488 22417935 . + . ID=GSCOCG00020632001;Name=Cc11_g06260 | |
| 61087 chr11 manual_curation mRNA 22409488 22417935 . + . ID=GSCOCT00020632001;Parent=GSCOCG00020632001;Name=Cc11_g06260 | |
| 61088 chr11 manual_curation polypeptide 22410341 22417559 . + . ID=GSCOCP00020632001;Dbxref=GENE3D:G3DSA:3.30.565.10,InterPro:IPR001789,InterPro:IPR003594,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR006189,InterPro:IPR009082,InterPro:IPR011006,PFAM:PF00072,PFAM:PF00512,PFAM:PF02518,PFAM:PF03924,PRINTS:PR00344,PROFILE:PS50109,PROFILE:PS50110,PROFILE:PS50839,SMART:SM00387,SMART:SM00388,SMART:SM00448,SUPERFAMILY:SSF47384,SUPERFAMILY:SSF52172,SUPERFAMILY:SSF55874,SwissProt:Q9C5U0,SwissProt:Q9C5U1,SwissProt:Q9C5U2,TAIR:AT1G27320.1,TAIR:AT2G01830.2,TAIR:AT5G35750.1,TrEMBL:B8QJH0,TrEMBL:B9SNH2,TrEMBL:F6HFB2;Derives_from=GSCOCT00020632001;Name=Cc11_g06260;Ontology_term=CC_evidence_code:ISS,GO:0000155,GO:0000156,GO:0000160,GO:0004673,GO:0004871,GO:0005524,GO:0007165,GO:0016020,GO:0016310,GO:0018106,CC_EC_number:2.7.13.3,PRODUCT:Histidine kinase 4,CC_functional_completeness:complete,CC_gene:AHK4,CC_gene:AHK2,CC_gene:AHK3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020632001~ Histidine kinase 4~ AHK4~ complete;original_location=join(2683131..2683463%2C2683669..2683902%2C2684024..2684193%2C2685835..2686053%2C2686133..2686319%2C2686410..2686461%2C2686578..2686807%2C2687027..2687125%2C2687429..2688132%2C2689335..2689838%2C2690079..2690349);owner=coffea | |
| 61089 chr11 manual_curation exon 22409488 22410673 . + . Parent=GSCOCT00020632001 | |
| 61090 chr11 manual_curation exon 22410879 22411112 . + . Parent=GSCOCT00020632001 | |
| 61091 chr11 manual_curation exon 22411234 22411403 . + . Parent=GSCOCT00020632001 | |
| 61092 chr11 manual_curation exon 22413045 22413263 . + . Parent=GSCOCT00020632001 | |
| 61093 chr11 manual_curation exon 22413343 22413529 . + . Parent=GSCOCT00020632001 | |
| 61094 chr11 manual_curation exon 22413620 22413671 . + . Parent=GSCOCT00020632001 | |
| 61095 chr11 manual_curation exon 22413788 22414017 . + . Parent=GSCOCT00020632001 | |
| 61096 chr11 manual_curation exon 22414237 22414335 . + . Parent=GSCOCT00020632001 | |
| 61097 chr11 manual_curation exon 22414639 22415342 . + . Parent=GSCOCT00020632001 | |
| 61098 chr11 manual_curation exon 22416545 22417048 . + . Parent=GSCOCT00020632001 | |
| 61099 chr11 manual_curation exon 22417289 22417935 . + . Parent=GSCOCT00020632001 | |
| 61100 chr11 manual_curation CDS 22410341 22410673 . + 0 Parent=GSCOCT00020632001 | |
| 61101 chr11 manual_curation CDS 22410879 22411112 . + 0 Parent=GSCOCT00020632001 | |
| 61102 chr11 manual_curation CDS 22411234 22411403 . + 0 Parent=GSCOCT00020632001 | |
| 61103 chr11 manual_curation CDS 22413045 22413263 . + 2 Parent=GSCOCT00020632001 | |
| 61104 chr11 manual_curation CDS 22413343 22413529 . + 2 Parent=GSCOCT00020632001 | |
| 61105 chr11 manual_curation CDS 22413620 22413671 . + 0 Parent=GSCOCT00020632001 | |
| 61106 chr11 manual_curation CDS 22413788 22414017 . + 1 Parent=GSCOCT00020632001 | |
| 61107 chr11 manual_curation CDS 22414237 22414335 . + 0 Parent=GSCOCT00020632001 | |
| 61108 chr11 manual_curation CDS 22414639 22415342 . + 0 Parent=GSCOCT00020632001 | |
| 61109 chr11 manual_curation CDS 22416545 22417048 . + 2 Parent=GSCOCT00020632001 | |
| 61110 chr11 manual_curation CDS 22417289 22417559 . + 2 Parent=GSCOCT00020632001 | |
| 61111 chr11 manual_curation gene 22449607 22454378 . + . ID=GSCOCG00020635001;Name=Cc11_g06270 | |
| 61112 chr11 manual_curation mRNA 22449607 22454378 . + . ID=GSCOCT00020635001;Parent=GSCOCG00020635001;Name=Cc11_g06270 | |
| 61113 chr11 manual_curation polypeptide 22449607 22454009 . + . ID=GSCOCP00020635001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:P43298,SwissProt:Q9LJF3,SwissProt:Q9LYN8,TAIR:AT1G24650.1,TAIR:AT1G66150.1,TAIR:AT2G01820.1,TrEMBL:B9GUN8,TrEMBL:F6HHZ7,TrEMBL:Q9M7A8;Derives_from=GSCOCT00020635001;Name=Cc11_g06270;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Probable receptor protein kinase TMK1,CC_functional_completeness:complete,CC_gene:TMK1,CC_gene:EXS,CC_gene:BRL3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020635001~ Probable receptor protein kinase TMK1~ TMK1~ complete;original_location=join(2722397..2722526%2C2723125..2725674%2C2726279..2726799);owner=coffea | |
| 61114 chr11 manual_curation exon 22449607 22449736 . + . Parent=GSCOCT00020635001 | |
| 61115 chr11 manual_curation exon 22450335 22452884 . + . Parent=GSCOCT00020635001 | |
| 61116 chr11 manual_curation exon 22453489 22454378 . + . Parent=GSCOCT00020635001 | |
| 61117 chr11 manual_curation CDS 22449607 22449736 . + 0 Parent=GSCOCT00020635001 | |
| 61118 chr11 manual_curation CDS 22450335 22452884 . + 1 Parent=GSCOCT00020635001 | |
| 61119 chr11 manual_curation CDS 22453489 22454009 . + 1 Parent=GSCOCT00020635001 | |
| 61120 chr11 manual_curation gene 22463577 22464663 . + . ID=GSCOCG00020636001;Name=Cc11_g06280 | |
| 61121 chr11 manual_curation mRNA 22463577 22464663 . + . ID=GSCOCT00020636001;Parent=GSCOCG00020636001;Name=Cc11_g06280 | |
| 61122 chr11 manual_curation polypeptide 22463577 22464663 . + . ID=GSCOCP00020636001;Dbxref=SwissProt:Q8GZ17,SwissProt:Q9FJ13,SwissProt:Q9LIB6,TAIR:AT3G16860.1,TAIR:AT4G16120.1,TAIR:AT5G49270.1,TrEMBL:A9PHD2,TrEMBL:B9SAX3,TrEMBL:D7SY69;Derives_from=GSCOCT00020636001;Name=Cc11_g06280;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative COBRA-like protein 7,CC_functional_completeness:fragment,CC_gene:COBL7,CC_gene:COBL9,CC_gene:COBL8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020636001~ Putative COBRA-like protein 7~ COBL7~ fragment;original_location=join(2736367..2736391%2C2736521..2736797%2C2737146..2737174%2C2737320..2737453);owner=coffea | |
| 61123 chr11 manual_curation exon 22463577 22463601 . + . Parent=GSCOCT00020636001 | |
| 61124 chr11 manual_curation exon 22463731 22464007 . + . Parent=GSCOCT00020636001 | |
| 61125 chr11 manual_curation exon 22464356 22464384 . + . Parent=GSCOCT00020636001 | |
| 61126 chr11 manual_curation exon 22464530 22464663 . + . Parent=GSCOCT00020636001 | |
| 61127 chr11 manual_curation CDS 22463577 22463601 . + 0 Parent=GSCOCT00020636001 | |
| 61128 chr11 manual_curation CDS 22463731 22464007 . + 1 Parent=GSCOCT00020636001 | |
| 61129 chr11 manual_curation CDS 22464356 22464384 . + 2 Parent=GSCOCT00020636001 | |
| 61130 chr11 manual_curation CDS 22464530 22464663 . + 1 Parent=GSCOCT00020636001 | |
| 61131 chr11 manual_curation gene 22477396 22478922 . + . ID=GSCOCG00020637001;Name=Cc11_g06290 | |
| 61132 chr11 manual_curation mRNA 22477396 22478922 . + . ID=GSCOCT00020637001;Parent=GSCOCG00020637001;Name=Cc11_g06290 | |
| 61133 chr11 manual_curation polypeptide 22477396 22478922 . + . ID=GSCOCP00020637001;Dbxref=GENE3D:G3DSA:3.40.640.10,GENE3D:G3DSA:3.90.1150.10,InterPro:IPR002129,InterPro:IPR010977,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,PANTHER:PTHR11999,PFAM:PF00282,PRINTS:PR00800,SUPERFAMILY:SSF53383,SwissProt:P54768,SwissProt:P54769,SwissProt:P54770,TAIR:AT2G20340.1,TAIR:AT4G28680.2,TrEMBL:Q000T5,TrEMBL:Q0ZQX0,TrEMBL:Q9AXN7;Derives_from=GSCOCT00020637001;Name=Cc11_g06290;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0006519,GO:0016831,GO:0019752,GO:0030170,CC_EC_number:4.1.1.28,PRODUCT:Tyrosine/DOPA decarboxylase 2,CC_functional_completeness:complete,CC_gene:TYDC2,CC_gene:TYDC3,CC_gene:TYDC1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020637001~ Tyrosine/DOPA decarboxylase 2~ TYDC2~ complete;original_location=join(2750186..2751100%2C2751203..2751712);owner=coffea | |
| 61134 chr11 manual_curation exon 22477396 22478310 . + . Parent=GSCOCT00020637001 | |
| 61135 chr11 manual_curation exon 22478413 22478922 . + . Parent=GSCOCT00020637001 | |
| 61136 chr11 manual_curation CDS 22477396 22478310 . + 0 Parent=GSCOCT00020637001 | |
| 61137 chr11 manual_curation CDS 22478413 22478922 . + 0 Parent=GSCOCT00020637001 | |
| 61138 chr11 manual_curation gene 22492566 22493894 . + . ID=GSCOCG00020638001;Name=Cc11_g06300 | |
| 61139 chr11 manual_curation mRNA 22492566 22493894 . + . ID=GSCOCT00020638001;Parent=GSCOCG00020638001;Name=Cc11_g06300 | |
| 61140 chr11 manual_curation polypeptide 22492566 22493894 . + . ID=GSCOCP00020638001;Dbxref=GENE3D:G3DSA:1.25.10.10,InterPro:IPR003613,InterPro:IPR011989,InterPro:IPR016024,PFAM:PF04564,SMART:SM00504,SUPERFAMILY:SSF48371,SwissProt:Q5PNY6,SwissProt:Q9C8D1,SwissProt:Q9FXA4,TAIR:AT1G49780.1,TAIR:AT1G66160.1,TAIR:AT5G37490.1,TrEMBL:I1MBT5,TrEMBL:I1MZG3,TrEMBL:Q8S8Z6;Derives_from=GSCOCT00020638001;Name=Cc11_g06300;Ontology_term=CC_evidence_code:ISS,GO:0000151,GO:0004842,GO:0005488,GO:0016567,CC_EC_number:missing_EC_number,PRODUCT:Putative U-box domain-containing protein 20,CC_functional_completeness:complete,CC_gene:PUB20,CC_gene:PUB21,CC_gene:PUB26;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020638001~ Putative U-box domain-containing protein 20~ PUB20~ complete;original_location=join(2765356..2766014%2C2766252..2766684);owner=coffea | |
| 61141 chr11 manual_curation exon 22492566 22493224 . + . Parent=GSCOCT00020638001 | |
| 61142 chr11 manual_curation exon 22493462 22493894 . + . Parent=GSCOCT00020638001 | |
| 61143 chr11 manual_curation CDS 22492566 22493224 . + 0 Parent=GSCOCT00020638001 | |
| 61144 chr11 manual_curation CDS 22493462 22493894 . + 2 Parent=GSCOCT00020638001 | |
| 61145 chr11 manual_curation gene 22547603 22549009 . - . ID=GSCOCG00020641001;Name=Cc11_g06310 | |
| 61146 chr11 manual_curation mRNA 22547603 22549009 . - . ID=GSCOCT00020641001;Parent=GSCOCG00020641001;Name=Cc11_g06310 | |
| 61147 chr11 manual_curation polypeptide 22547603 22549009 . - . ID=GSCOCP00020641001;Dbxref=GENE3D:G3DSA:1.20.58.150,GENE3D:G3DSA:1.25.40.90,InterPro:IPR008942,InterPro:IPR011417,InterPro:IPR013809,InterPro:IPR014712,PFAM:PF07651,PROFILE:PS50942,SMART:SM00273,SUPERFAMILY:SSF48464,SwissProt:P94017,SwissProt:Q8LBH2,SwissProt:Q9SA65,TAIR:AT1G03050.1,TAIR:AT1G14910.1,TAIR:AT2G01600.1,TrEMBL:A5AH52,TrEMBL:B9HVS5,TrEMBL:B9SNG6;Derives_from=GSCOCT00020641001;Name=Cc11_g06310;Ontology_term=CC_evidence_code:ISS,GO:0005543,GO:0005545,GO:0030118,GO:0030276,GO:0048268,CC_EC_number:missing_EC_number,PRODUCT:Putative clathrin assembly protein At1g03050,CC_functional_completeness:fragment,CC_gene:At1g03050,CC_gene:At2g01600,CC_gene:At1g14910;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020641001~ Putative clathrin assembly protein At1g03050~ At1g03050~ fragment;original_location=complement(join(2820587..2821799%2C2820393..2820532));owner=coffea | |
| 61148 chr11 manual_curation exon 22547603 22547742 . - . Parent=GSCOCT00020641001 | |
| 61149 chr11 manual_curation exon 22547797 22549009 . - . Parent=GSCOCT00020641001 | |
| 61150 chr11 manual_curation CDS 22547603 22547742 . - 1 Parent=GSCOCT00020641001 | |
| 61151 chr11 manual_curation CDS 22547797 22549009 . - 0 Parent=GSCOCT00020641001 | |
| 61152 chr11 manual_curation gene 22550602 22553272 . - . ID=GSCOCG00020642001;Name=Cc11_g06320 | |
| 61153 chr11 manual_curation mRNA 22550602 22553272 . - . ID=GSCOCT00020642001;Parent=GSCOCG00020642001;Name=Cc11_g06320 | |
| 61154 chr11 manual_curation polypeptide 22551197 22553272 . - . ID=GSCOCP00020642001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q6L3Z7,SwissProt:Q6L403,SwissProt:Q6L438,TAIR:AT3G46530.1,TAIR:AT3G46730.1,TAIR:AT5G35450.1,TrEMBL:Q6L432,TrEMBL:Q96485,TrEMBL:Q9LLD0;Derives_from=GSCOCT00020642001;Name=Cc11_g06320;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1B-14,CC_functional_completeness:fragment,CC_gene:R1B-14,CC_gene:R1B-17,CC_gene:R1A-6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020642001~ Putative late blight resistance protein homolog R1B-14~ R1B-14~ fragment;original_location=complement(2823987..2826062);owner=coffea | |
| 61155 chr11 manual_curation exon 22550602 22550941 . - . Parent=GSCOCT00020642001 | |
| 61156 chr11 manual_curation exon 22551178 22553272 . - . Parent=GSCOCT00020642001 | |
| 61157 chr11 manual_curation CDS 22551197 22553272 . - 0 Parent=GSCOCT00020642001 | |
| 61158 chr11 manual_curation gene 22565134 22568658 . - . ID=GSCOCG00020643001;Name=Cc11_g06330 | |
| 61159 chr11 manual_curation mRNA 22565134 22568658 . - . ID=GSCOCT00020643001;Parent=GSCOCG00020643001;Name=Cc11_g06330 | |
| 61160 chr11 manual_curation polypeptide 22565320 22568603 . - . ID=GSCOCP00020643001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR001360,InterPro:IPR013781,InterPro:IPR017853,InterPro:IPR018120,PANTHER:PTHR10353,PFAM:PF00232,PRINTS:PR00131,PROSITE:PS00653,SUPERFAMILY:SSF51445,SwissProt:Q7XPY7,SwissProt:Q7XSK0,SwissProt:Q7XSK2,TAIR:AT1G61810.3,TAIR:AT1G61820.1,TAIR:AT4G21760.1,TrEMBL:F6H271,TrEMBL:I1M3A5,TrEMBL:I1M3A6;Derives_from=GSCOCT00020643001;Name=Cc11_g06330;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0043169,CC_EC_number:3.2.1.21,PRODUCT:Beta-glucosidase 18,CC_functional_completeness:complete,CC_gene:BGLU18,CC_gene:BGLU14,CC_gene:BGLU16;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020643001~ Beta-glucosidase 18~ BGLU18~ complete;original_location=complement(join(2841226..2841393%2C2841034..2841100%2C2840869..2840927%2C2840643..2840718%2C2840478..2840552%2C2840300..2840387%2C2839945..2840206%2C2839692..2839807%2C2839203..2839476%2C2838987..2839089%2C2838424..2838529%2C2838110..2838347));owner=coffea | |
| 61161 chr11 manual_curation exon 22565134 22565557 . - . Parent=GSCOCT00020643001 | |
| 61162 chr11 manual_curation exon 22565634 22565739 . - . Parent=GSCOCT00020643001 | |
| 61163 chr11 manual_curation exon 22566197 22566299 . - . Parent=GSCOCT00020643001 | |
| 61164 chr11 manual_curation exon 22566413 22566686 . - . Parent=GSCOCT00020643001 | |
| 61165 chr11 manual_curation exon 22566902 22567017 . - . Parent=GSCOCT00020643001 | |
| 61166 chr11 manual_curation exon 22567155 22567416 . - . Parent=GSCOCT00020643001 | |
| 61167 chr11 manual_curation exon 22567510 22567597 . - . Parent=GSCOCT00020643001 | |
| 61168 chr11 manual_curation exon 22567688 22567762 . - . Parent=GSCOCT00020643001 | |
| 61169 chr11 manual_curation exon 22567853 22567928 . - . Parent=GSCOCT00020643001 | |
| 61170 chr11 manual_curation exon 22568079 22568137 . - . Parent=GSCOCT00020643001 | |
| 61171 chr11 manual_curation exon 22568244 22568310 . - . Parent=GSCOCT00020643001 | |
| 61172 chr11 manual_curation exon 22568436 22568658 . - . Parent=GSCOCT00020643001 | |
| 61173 chr11 manual_curation CDS 22565320 22565557 . - 2 Parent=GSCOCT00020643001 | |
| 61174 chr11 manual_curation CDS 22565634 22565739 . - 1 Parent=GSCOCT00020643001 | |
| 61175 chr11 manual_curation CDS 22566197 22566299 . - 0 Parent=GSCOCT00020643001 | |
| 61176 chr11 manual_curation CDS 22566413 22566686 . - 2 Parent=GSCOCT00020643001 | |
| 61177 chr11 manual_curation CDS 22566902 22567017 . - 0 Parent=GSCOCT00020643001 | |
| 61178 chr11 manual_curation CDS 22567155 22567416 . - 2 Parent=GSCOCT00020643001 | |
| 61179 chr11 manual_curation CDS 22567510 22567597 . - 1 Parent=GSCOCT00020643001 | |
| 61180 chr11 manual_curation CDS 22567688 22567762 . - 1 Parent=GSCOCT00020643001 | |
| 61181 chr11 manual_curation CDS 22567853 22567928 . - 0 Parent=GSCOCT00020643001 | |
| 61182 chr11 manual_curation CDS 22568079 22568137 . - 1 Parent=GSCOCT00020643001 | |
| 61183 chr11 manual_curation CDS 22568244 22568310 . - 0 Parent=GSCOCT00020643001 | |
| 61184 chr11 manual_curation CDS 22568436 22568603 . - 0 Parent=GSCOCT00020643001 | |
| 61185 chr11 manual_curation gene 22576669 22580318 . - . ID=GSCOCG00020644001;Name=Cc11_g06340 | |
| 61186 chr11 manual_curation mRNA 22576669 22580318 . - . ID=GSCOCT00020644001;Parent=GSCOCG00020644001;Name=Cc11_g06340 | |
| 61187 chr11 manual_curation polypeptide 22576669 22580318 . - . ID=GSCOCP00020644001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR001360,InterPro:IPR013781,InterPro:IPR017853,InterPro:IPR018120,PANTHER:PTHR10353,PFAM:PF00232,PRINTS:PR00131,PROSITE:PS00653,SUPERFAMILY:SSF51445,SwissProt:Q7XPY7,SwissProt:Q7XSK0,SwissProt:Q7XSK2,TAIR:AT1G61810.3,TAIR:AT1G61820.1,TAIR:AT4G21760.1,TrEMBL:F6H271,TrEMBL:I1M3A5,TrEMBL:I1M3A6;Derives_from=GSCOCT00020644001;Name=Cc11_g06340;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0043169,CC_EC_number:3.2.1.21,PRODUCT:Beta-glucosidase 18,CC_functional_completeness:complete,CC_gene:BGLU18,CC_gene:BGLU16,CC_gene:BGLU14;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020644001~ Beta-glucosidase 18~ BGLU18~ complete;original_location=complement(join(2852941..2853108%2C2852749..2852815%2C2852231..2852289%2C2852005..2852080%2C2851843..2851917%2C2851665..2851752%2C2851303..2851571%2C2851067..2851172%2C2850578..2850851%2C2850362..2850464%2C2849842..2849947%2C2849459..2849765));owner=coffea | |
| 61188 chr11 manual_curation exon 22576669 22576975 . - . Parent=GSCOCT00020644001 | |
| 61189 chr11 manual_curation exon 22577052 22577157 . - . Parent=GSCOCT00020644001 | |
| 61190 chr11 manual_curation exon 22577572 22577674 . - . Parent=GSCOCT00020644001 | |
| 61191 chr11 manual_curation exon 22577788 22578061 . - . Parent=GSCOCT00020644001 | |
| 61192 chr11 manual_curation exon 22578277 22578382 . - . Parent=GSCOCT00020644001 | |
| 61193 chr11 manual_curation exon 22578513 22578781 . - . Parent=GSCOCT00020644001 | |
| 61194 chr11 manual_curation exon 22578875 22578962 . - . Parent=GSCOCT00020644001 | |
| 61195 chr11 manual_curation exon 22579053 22579127 . - . Parent=GSCOCT00020644001 | |
| 61196 chr11 manual_curation exon 22579215 22579290 . - . Parent=GSCOCT00020644001 | |
| 61197 chr11 manual_curation exon 22579441 22579499 . - . Parent=GSCOCT00020644001 | |
| 61198 chr11 manual_curation exon 22579959 22580025 . - . Parent=GSCOCT00020644001 | |
| 61199 chr11 manual_curation exon 22580151 22580318 . - . Parent=GSCOCT00020644001 | |
| 61200 chr11 manual_curation CDS 22576669 22576975 . - 2 Parent=GSCOCT00020644001 | |
| 61201 chr11 manual_curation CDS 22577052 22577157 . - 1 Parent=GSCOCT00020644001 | |
| 61202 chr11 manual_curation CDS 22577572 22577674 . - 0 Parent=GSCOCT00020644001 | |
| 61203 chr11 manual_curation CDS 22577788 22578061 . - 2 Parent=GSCOCT00020644001 | |
| 61204 chr11 manual_curation CDS 22578277 22578382 . - 1 Parent=GSCOCT00020644001 | |
| 61205 chr11 manual_curation CDS 22578513 22578781 . - 2 Parent=GSCOCT00020644001 | |
| 61206 chr11 manual_curation CDS 22578875 22578962 . - 1 Parent=GSCOCT00020644001 | |
| 61207 chr11 manual_curation CDS 22579053 22579127 . - 1 Parent=GSCOCT00020644001 | |
| 61208 chr11 manual_curation CDS 22579215 22579290 . - 0 Parent=GSCOCT00020644001 | |
| 61209 chr11 manual_curation CDS 22579441 22579499 . - 1 Parent=GSCOCT00020644001 | |
| 61210 chr11 manual_curation CDS 22579959 22580025 . - 0 Parent=GSCOCT00020644001 | |
| 61211 chr11 manual_curation CDS 22580151 22580318 . - 0 Parent=GSCOCT00020644001 | |
| 61212 chr11 manual_curation gene 22590028 22593085 . - . ID=GSCOCG00020645001;Name=Cc11_g06350 | |
| 61213 chr11 manual_curation mRNA 22590028 22593085 . - . ID=GSCOCT00020645001;Parent=GSCOCG00020645001;Name=Cc11_g06350 | |
| 61214 chr11 manual_curation polypeptide 22590028 22593085 . - . ID=GSCOCP00020645001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR001360,InterPro:IPR013781,InterPro:IPR017853,PANTHER:PTHR10353,PFAM:PF00232,PRINTS:PR00131,SUPERFAMILY:SSF51445,SwissProt:Q7XPY7,SwissProt:Q7XSK0,SwissProt:Q7XSK2,TAIR:AT1G61810.3,TAIR:AT1G61820.1,TAIR:AT4G21760.1,TrEMBL:F6H271,TrEMBL:I1M3A5,TrEMBL:I1M3A6;Derives_from=GSCOCT00020645001;Name=Cc11_g06350;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0043169,CC_EC_number:3.2.1.21,PRODUCT:Putative Beta-glucosidase 18,CC_functional_completeness:complete,CC_gene:BGLU18,CC_gene:BGLU14,CC_gene:BGLU16;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020645001~ Putative Beta-glucosidase 18~ BGLU18~ complete;original_location=complement(join(2865725..2865875%2C2865513..2865584%2C2865036..2865110%2C2864851..2864965%2C2864475..2864743%2C2864280..2864377%2C2864148..2864188%2C2863813..2864086%2C2863577..2863709%2C2863421..2863526%2C2862818..2863052));owner=coffea | |
| 61215 chr11 manual_curation exon 22590028 22590262 . - . Parent=GSCOCT00020645001 | |
| 61216 chr11 manual_curation exon 22590631 22590736 . - . Parent=GSCOCT00020645001 | |
| 61217 chr11 manual_curation exon 22590787 22590919 . - . Parent=GSCOCT00020645001 | |
| 61218 chr11 manual_curation exon 22591023 22591296 . - . Parent=GSCOCT00020645001 | |
| 61219 chr11 manual_curation exon 22591358 22591398 . - . Parent=GSCOCT00020645001 | |
| 61220 chr11 manual_curation exon 22591490 22591587 . - . Parent=GSCOCT00020645001 | |
| 61221 chr11 manual_curation exon 22591685 22591953 . - . Parent=GSCOCT00020645001 | |
| 61222 chr11 manual_curation exon 22592061 22592175 . - . Parent=GSCOCT00020645001 | |
| 61223 chr11 manual_curation exon 22592246 22592320 . - . Parent=GSCOCT00020645001 | |
| 61224 chr11 manual_curation exon 22592723 22592794 . - . Parent=GSCOCT00020645001 | |
| 61225 chr11 manual_curation exon 22592935 22593085 . - . Parent=GSCOCT00020645001 | |
| 61226 chr11 manual_curation CDS 22590028 22590262 . - 2 Parent=GSCOCT00020645001 | |
| 61227 chr11 manual_curation CDS 22590631 22590736 . - 1 Parent=GSCOCT00020645001 | |
| 61228 chr11 manual_curation CDS 22590787 22590919 . - 0 Parent=GSCOCT00020645001 | |
| 61229 chr11 manual_curation CDS 22591023 22591296 . - 2 Parent=GSCOCT00020645001 | |
| 61230 chr11 manual_curation CDS 22591358 22591398 . - 0 Parent=GSCOCT00020645001 | |
| 61231 chr11 manual_curation CDS 22591490 22591587 . - 1 Parent=GSCOCT00020645001 | |
| 61232 chr11 manual_curation CDS 22591685 22591953 . - 2 Parent=GSCOCT00020645001 | |
| 61233 chr11 manual_curation CDS 22592061 22592175 . - 1 Parent=GSCOCT00020645001 | |
| 61234 chr11 manual_curation CDS 22592246 22592320 . - 1 Parent=GSCOCT00020645001 | |
| 61235 chr11 manual_curation CDS 22592723 22592794 . - 1 Parent=GSCOCT00020645001 | |
| 61236 chr11 manual_curation CDS 22592935 22593085 . - 0 Parent=GSCOCT00020645001 | |
| 61237 chr11 manual_curation gene 22609692 22613354 . - . ID=GSCOCG00020646001;Name=Cc11_g06360 | |
| 61238 chr11 manual_curation mRNA 22609692 22613354 . - . ID=GSCOCT00020646001;Parent=GSCOCG00020646001;Name=Cc11_g06360 | |
| 61239 chr11 manual_curation polypeptide 22609692 22613354 . - . ID=GSCOCP00020646001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,InterPro:IPR021929,PFAM:PF00931,PFAM:PF12061,PRINTS:PR00364,SwissProt:Q6L3Z7,SwissProt:Q6L400,SwissProt:Q6L403,TAIR:AT1G50180.1,TAIR:AT1G53350.1,TAIR:AT1G59780.1,TrEMBL:Q6L432,TrEMBL:Q96485,TrEMBL:Q9LLD0;Derives_from=GSCOCT00020646001;Name=Cc11_g06360;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1B-14,CC_functional_completeness:complete,CC_gene:R1B-14,CC_gene:R1B-16,CC_gene:R1B-17;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020646001~ Putative late blight resistance protein homolog R1B-14~ R1B-14~ complete;original_location=complement(2882482..2886144);owner=coffea | |
| 61240 chr11 manual_curation exon 22609692 22613354 . - . Parent=GSCOCT00020646001 | |
| 61241 chr11 manual_curation CDS 22609692 22613354 . - 0 Parent=GSCOCT00020646001 | |
| 61242 chr11 manual_curation gene 22624045 22627573 . - . ID=GSCOCG00020648001;Name=Cc11_g06370 | |
| 61243 chr11 manual_curation mRNA 22624045 22627573 . - . ID=GSCOCT00020648001;Parent=GSCOCG00020648001;Name=Cc11_g06370 | |
| 61244 chr11 manual_curation polypeptide 22624045 22627508 . - . ID=GSCOCP00020648001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR001360,InterPro:IPR013781,InterPro:IPR017853,InterPro:IPR018120,PANTHER:PTHR10353,PFAM:PF00232,PRINTS:PR00131,PROSITE:PS00653,SUPERFAMILY:SSF51445,SwissProt:Q7XPY7,SwissProt:Q7XSK0,SwissProt:Q7XSK2,TAIR:AT1G61810.3,TAIR:AT1G61820.1,TAIR:AT4G21760.1,TrEMBL:F6H271,TrEMBL:I1M3A5,TrEMBL:I1M3A6;Derives_from=GSCOCT00020648001;Name=Cc11_g06370;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0043169,CC_EC_number:3.2.1.21,PRODUCT:Beta-glucosidase 18,CC_functional_completeness:complete,CC_gene:BGLU18,CC_gene:BGLU14,CC_gene:BGLU16;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020648001~ Beta-glucosidase 18~ BGLU18~ complete;original_location=complement(join(2900119..2900298%2C2899935..2900001%2C2899771..2899829%2C2899545..2899620%2C2899068..2899142%2C2898883..2898970%2C2898507..2898775%2C2898303..2898408%2C2897842..2898115%2C2897636..2897738%2C2897450..2897555%2C2896835..2897069));owner=coffea | |
| 61245 chr11 manual_curation exon 22624045 22624279 . - . Parent=GSCOCT00020648001 | |
| 61246 chr11 manual_curation exon 22624660 22624765 . - . Parent=GSCOCT00020648001 | |
| 61247 chr11 manual_curation exon 22624846 22624948 . - . Parent=GSCOCT00020648001 | |
| 61248 chr11 manual_curation exon 22625052 22625325 . - . Parent=GSCOCT00020648001 | |
| 61249 chr11 manual_curation exon 22625513 22625618 . - . Parent=GSCOCT00020648001 | |
| 61250 chr11 manual_curation exon 22625717 22625985 . - . Parent=GSCOCT00020648001 | |
| 61251 chr11 manual_curation exon 22626093 22626180 . - . Parent=GSCOCT00020648001 | |
| 61252 chr11 manual_curation exon 22626278 22626352 . - . Parent=GSCOCT00020648001 | |
| 61253 chr11 manual_curation exon 22626755 22626830 . - . Parent=GSCOCT00020648001 | |
| 61254 chr11 manual_curation exon 22626981 22627039 . - . Parent=GSCOCT00020648001 | |
| 61255 chr11 manual_curation exon 22627145 22627211 . - . Parent=GSCOCT00020648001 | |
| 61256 chr11 manual_curation exon 22627329 22627573 . - . Parent=GSCOCT00020648001 | |
| 61257 chr11 manual_curation CDS 22624045 22624279 . - 2 Parent=GSCOCT00020648001 | |
| 61258 chr11 manual_curation CDS 22624660 22624765 . - 1 Parent=GSCOCT00020648001 | |
| 61259 chr11 manual_curation CDS 22624846 22624948 . - 0 Parent=GSCOCT00020648001 | |
| 61260 chr11 manual_curation CDS 22625052 22625325 . - 2 Parent=GSCOCT00020648001 | |
| 61261 chr11 manual_curation CDS 22625513 22625618 . - 1 Parent=GSCOCT00020648001 | |
| 61262 chr11 manual_curation CDS 22625717 22625985 . - 2 Parent=GSCOCT00020648001 | |
| 61263 chr11 manual_curation CDS 22626093 22626180 . - 1 Parent=GSCOCT00020648001 | |
| 61264 chr11 manual_curation CDS 22626278 22626352 . - 1 Parent=GSCOCT00020648001 | |
| 61265 chr11 manual_curation CDS 22626755 22626830 . - 0 Parent=GSCOCT00020648001 | |
| 61266 chr11 manual_curation CDS 22626981 22627039 . - 1 Parent=GSCOCT00020648001 | |
| 61267 chr11 manual_curation CDS 22627145 22627211 . - 0 Parent=GSCOCT00020648001 | |
| 61268 chr11 manual_curation CDS 22627329 22627508 . - 0 Parent=GSCOCT00020648001 | |
| 61269 chr11 manual_curation gene 22654587 22656195 . + . ID=GSCOCG00020650001;Name=Cc11_g06380 | |
| 61270 chr11 manual_curation mRNA 22654587 22656195 . + . ID=GSCOCT00020650001;Parent=GSCOCG00020650001;Name=Cc11_g06380 | |
| 61271 chr11 manual_curation polypeptide 22654587 22656195 . + . ID=GSCOCP00020650001;Dbxref=TAIR:AT5G35695.1,TAIR:AT5G41980.1,TrEMBL:A5C203,TrEMBL:B9SXS9,TrEMBL:Q7F446;Derives_from=GSCOCT00020650001;Name=Cc11_g06380;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020650001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=join(2927377..2927731%2C2928160..2928191%2C2928548..2928985);owner=coffea | |
| 61272 chr11 manual_curation exon 22654587 22654941 . + . Parent=GSCOCT00020650001 | |
| 61273 chr11 manual_curation exon 22655370 22655401 . + . Parent=GSCOCT00020650001 | |
| 61274 chr11 manual_curation exon 22655758 22656195 . + . Parent=GSCOCT00020650001 | |
| 61275 chr11 manual_curation CDS 22654587 22654941 . + 0 Parent=GSCOCT00020650001 | |
| 61276 chr11 manual_curation CDS 22655370 22655401 . + 1 Parent=GSCOCT00020650001 | |
| 61277 chr11 manual_curation CDS 22655758 22656195 . + 0 Parent=GSCOCT00020650001 | |
| 61278 chr11 manual_curation gene 22684082 22686745 . + . ID=GSCOCG00020651001;Name=Cc11_g06390 | |
| 61279 chr11 manual_curation mRNA 22684082 22686745 . + . ID=GSCOCT00020651001;Parent=GSCOCG00020651001;Name=Cc11_g06390 | |
| 61280 chr11 manual_curation polypeptide 22684082 22686505 . + . ID=GSCOCP00020651001;Dbxref=InterPro:IPR000719,InterPro:IPR000858,InterPro:IPR001480,InterPro:IPR002290,InterPro:IPR003609,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00954,PFAM:PF01453,PROFILE:PS50011,PROFILE:PS50927,PROFILE:PS50948,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF51110,SUPERFAMILY:SSF56112,SwissProt:P17801,SwissProt:Q9FLV4,SwissProt:Q9XID3,TAIR:AT1G34300.1,TAIR:AT4G00340.1,TAIR:AT5G35370.1,TrEMBL:A5AH51,TrEMBL:B9SNG5,TrEMBL:F6HFB8;Derives_from=GSCOCT00020651001;Name=Cc11_g06390;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0005529,GO:0006468,GO:0048544,CC_EC_number:2.7.11.25,PRODUCT:Putative G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300,CC_functional_completeness:complete,CC_gene:At1g34300,CC_gene:At5g24080,CC_gene:PK1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020651001~ Putative G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300~ At1g34300~ complete;original_location=2956872..2959295;owner=coffea | |
| 61281 chr11 manual_curation exon 22684082 22686745 . + . Parent=GSCOCT00020651001 | |
| 61282 chr11 manual_curation CDS 22684082 22686505 . + 0 Parent=GSCOCT00020651001 | |
| 61283 chr11 manual_curation gene 22691015 22693655 . + . ID=GSCOCG00020652001;Name=Cc11_g06400 | |
| 61284 chr11 manual_curation mRNA 22691015 22693655 . + . ID=GSCOCT00020652001;Parent=GSCOCG00020652001;Name=Cc11_g06400 | |
| 61285 chr11 manual_curation polypeptide 22691015 22693465 . + . ID=GSCOCP00020652001;Dbxref=InterPro:IPR000719,InterPro:IPR000742,InterPro:IPR000858,InterPro:IPR001480,InterPro:IPR002290,InterPro:IPR003609,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR013032,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00954,PFAM:PF01453,PROFILE:PS50011,PROFILE:PS50026,PROFILE:PS50927,PROFILE:PS50948,PROSITE:PS00107,PROSITE:PS00108,PROSITE:PS01186,SMART:SM00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF51110,SUPERFAMILY:SSF56112,SwissProt:P17801,SwissProt:Q9FLV4,SwissProt:Q9XID3,TAIR:AT1G34300.1,TAIR:AT2G19130.1,TAIR:AT4G00340.1,TrEMBL:A5AH51,TrEMBL:B9SNG5,TrEMBL:F6HFB8;Derives_from=GSCOCT00020652001;Name=Cc11_g06400;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0005529,GO:0006468,GO:0048544,CC_EC_number:2.7.11.25,PRODUCT:Putative G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300,CC_functional_completeness:complete,CC_gene:At1g34300,CC_gene:At5g24080,CC_gene:PK1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020652001~ Putative G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300~ At1g34300~ complete;original_location=2963805..2966255;owner=coffea | |
| 61286 chr11 manual_curation exon 22691015 22693655 . + . Parent=GSCOCT00020652001 | |
| 61287 chr11 manual_curation CDS 22691015 22693465 . + 0 Parent=GSCOCT00020652001 | |
| 61288 chr11 manual_curation gene 22698393 22707378 . - . ID=GSCOCG00020653001;Name=Cc11_g06410 | |
| 61289 chr11 manual_curation mRNA 22698393 22707378 . - . ID=GSCOCT00020653001;Parent=GSCOCG00020653001;Name=Cc11_g06410 | |
| 61290 chr11 manual_curation polypeptide 22698748 22707378 . - . ID=GSCOCP00020653001;Dbxref=InterPro:IPR008010,PANTHER:PTHR13317,PFAM:PF05346,SwissProt:F4HVJ3,SwissProt:Q550C1,SwissProt:Q9U3H8,TAIR:AT1G67960.1,TrEMBL:B9HVS7,TrEMBL:D7T8I0,TrEMBL:I1JXD0;Derives_from=GSCOCT00020653001;Name=Cc11_g06410;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein POLLEN DEFECTIVE IN GUIDANCE 1,CC_functional_completeness:complete,CC_gene:POD1,CC_gene:DDB_G0277313,CC_gene:F26F2.7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020653001~ Protein POLLEN DEFECTIVE IN GUIDANCE 1~ POD1~ complete;original_location=complement(join(2979547..2980168%2C2976357..2976508%2C2975544..2975647%2C2974416..2974504%2C2974182..2974255%2C2972997..2973198%2C2972784..2972927%2C2972393..2972490%2C2972162..2972284%2C2971961..2972029%2C2971538..2971741));owner=coffea | |
| 61291 chr11 manual_curation exon 22698393 22698951 . - . Parent=GSCOCT00020653001 | |
| 61292 chr11 manual_curation exon 22699171 22699239 . - . Parent=GSCOCT00020653001 | |
| 61293 chr11 manual_curation exon 22699372 22699494 . - . Parent=GSCOCT00020653001 | |
| 61294 chr11 manual_curation exon 22699603 22699700 . - . Parent=GSCOCT00020653001 | |
| 61295 chr11 manual_curation exon 22699994 22700137 . - . Parent=GSCOCT00020653001 | |
| 61296 chr11 manual_curation exon 22700207 22700408 . - . Parent=GSCOCT00020653001 | |
| 61297 chr11 manual_curation exon 22701392 22701465 . - . Parent=GSCOCT00020653001 | |
| 61298 chr11 manual_curation exon 22701626 22701714 . - . Parent=GSCOCT00020653001 | |
| 61299 chr11 manual_curation exon 22702754 22702857 . - . Parent=GSCOCT00020653001 | |
| 61300 chr11 manual_curation exon 22703567 22703718 . - . Parent=GSCOCT00020653001 | |
| 61301 chr11 manual_curation exon 22706757 22707378 . - . Parent=GSCOCT00020653001 | |
| 61302 chr11 manual_curation CDS 22698748 22698951 . - 0 Parent=GSCOCT00020653001 | |
| 61303 chr11 manual_curation CDS 22699171 22699239 . - 0 Parent=GSCOCT00020653001 | |
| 61304 chr11 manual_curation CDS 22699372 22699494 . - 0 Parent=GSCOCT00020653001 | |
| 61305 chr11 manual_curation CDS 22699603 22699700 . - 1 Parent=GSCOCT00020653001 | |
| 61306 chr11 manual_curation CDS 22699994 22700137 . - 1 Parent=GSCOCT00020653001 | |
| 61307 chr11 manual_curation CDS 22700207 22700408 . - 0 Parent=GSCOCT00020653001 | |
| 61308 chr11 manual_curation CDS 22701392 22701465 . - 1 Parent=GSCOCT00020653001 | |
| 61309 chr11 manual_curation CDS 22701626 22701714 . - 2 Parent=GSCOCT00020653001 | |
| 61310 chr11 manual_curation CDS 22702754 22702857 . - 0 Parent=GSCOCT00020653001 | |
| 61311 chr11 manual_curation CDS 22703567 22703718 . - 1 Parent=GSCOCT00020653001 | |
| 61312 chr11 manual_curation CDS 22706757 22707378 . - 0 Parent=GSCOCT00020653001 | |
| 61313 chr11 manual_curation gene 22712422 22715463 . + . ID=GSCOCG00020654001;Name=Cc11_g06420 | |
| 61314 chr11 manual_curation mRNA 22712422 22715463 . + . ID=GSCOCT00020654001;Parent=GSCOCG00020654001;Name=Cc11_g06420 | |
| 61315 chr11 manual_curation polypeptide 22712422 22714093 . + . ID=GSCOCP00020654001;Dbxref=InterPro:IPR000315,InterPro:IPR006734,PFAM:PF04640,PROFILE:PS50119,TAIR:AT2G01818.1,TAIR:AT2G12646.1,TAIR:AT3G60670.1,TrEMBL:B9HJI8,TrEMBL:B9SNG3,TrEMBL:D7T8I1;Derives_from=GSCOCT00020654001;Name=Cc11_g06420;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative PLATZ transcription factor family protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020654001~ Putative PLATZ transcription factor family protein~ unknown_gene~ modules;original_location=join(2985212..2985262%2C2985379..2985576%2C2985676..2985951%2C2986391..2986546%2C2986665..2986883);owner=coffea | |
| 61316 chr11 manual_curation exon 22712422 22712472 . + . Parent=GSCOCT00020654001 | |
| 61317 chr11 manual_curation exon 22712589 22712786 . + . Parent=GSCOCT00020654001 | |
| 61318 chr11 manual_curation exon 22712886 22713161 . + . Parent=GSCOCT00020654001 | |
| 61319 chr11 manual_curation exon 22713601 22713756 . + . Parent=GSCOCT00020654001 | |
| 61320 chr11 manual_curation exon 22713875 22715463 . + . Parent=GSCOCT00020654001 | |
| 61321 chr11 manual_curation CDS 22712422 22712472 . + 0 Parent=GSCOCT00020654001 | |
| 61322 chr11 manual_curation CDS 22712589 22712786 . + 0 Parent=GSCOCT00020654001 | |
| 61323 chr11 manual_curation CDS 22712886 22713161 . + 0 Parent=GSCOCT00020654001 | |
| 61324 chr11 manual_curation CDS 22713601 22713756 . + 0 Parent=GSCOCT00020654001 | |
| 61325 chr11 manual_curation CDS 22713875 22714093 . + 0 Parent=GSCOCT00020654001 | |
| 61326 chr11 manual_curation gene 22720559 22725380 . - . ID=GSCOCG00020656001;Name=Cc11_g06430 | |
| 61327 chr11 manual_curation mRNA 22720559 22725380 . - . ID=GSCOCT00020656001;Parent=GSCOCG00020656001;Name=Cc11_g06430 | |
| 61328 chr11 manual_curation polypeptide 22720820 22724522 . - . ID=GSCOCP00020656001;Dbxref=InterPro:IPR000804,InterPro:IPR011012,InterPro:IPR015604,InterPro:IPR016635,InterPro:IPR022775,PANTHER:PTHR11753:SF5,PFAM:PF01217,PIR:PIRSF015588,PROSITE:PS00989,SUPERFAMILY:SSF64356,SwissProt:B0G185,SwissProt:O23685,SwissProt:Q8LEZ8,TAIR:AT1G47830.1,TAIR:AT2G17380.1,TAIR:AT4G35410.2,TrEMBL:B9IC94;Derives_from=GSCOCT00020656001;Name=Cc11_g06430;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0006810,GO:0006886,GO:0008565,GO:0015031,GO:0016192,GO:0030117,GO:0030130,GO:0030131,CC_EC_number:missing_EC_number,PRODUCT:AP-1 complex subunit sigma-2,CC_functional_completeness:complete,CC_gene:AAP19-2,CC_gene:AAP19-1,CC_gene:ap1s2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020656001~ AP-1 complex subunit sigma-2~ AAP19-2~ complete;original_location=complement(join(2997282..2997312%2C2996779..2996903%2C2996328..2996419%2C2996061..2996169%2C2995891..2995926%2C2993761..2993847%2C2993610..2993681));owner=coffea | |
| 61329 chr11 manual_curation exon 22720559 22720891 . - . Parent=GSCOCT00020656001 | |
| 61330 chr11 manual_curation exon 22720971 22721057 . - . Parent=GSCOCT00020656001 | |
| 61331 chr11 manual_curation exon 22723101 22723136 . - . Parent=GSCOCT00020656001 | |
| 61332 chr11 manual_curation exon 22723271 22723379 . - . Parent=GSCOCT00020656001 | |
| 61333 chr11 manual_curation exon 22723538 22723629 . - . Parent=GSCOCT00020656001 | |
| 61334 chr11 manual_curation exon 22723989 22724113 . - . Parent=GSCOCT00020656001 | |
| 61335 chr11 manual_curation exon 22724492 22725380 . - . Parent=GSCOCT00020656001 | |
| 61336 chr11 manual_curation CDS 22720820 22720891 . - 0 Parent=GSCOCT00020656001 | |
| 61337 chr11 manual_curation CDS 22720971 22721057 . - 0 Parent=GSCOCT00020656001 | |
| 61338 chr11 manual_curation CDS 22723101 22723136 . - 0 Parent=GSCOCT00020656001 | |
| 61339 chr11 manual_curation CDS 22723271 22723379 . - 2 Parent=GSCOCT00020656001 | |
| 61340 chr11 manual_curation CDS 22723538 22723629 . - 0 Parent=GSCOCT00020656001 | |
| 61341 chr11 manual_curation CDS 22723989 22724113 . - 1 Parent=GSCOCT00020656001 | |
| 61342 chr11 manual_curation CDS 22724492 22724522 . - 0 Parent=GSCOCT00020656001 | |
| 61343 chr11 manual_curation gene 22725975 22728460 . - . ID=GSCOCG00020657001;Name=Cc11_g06440 | |
| 61344 chr11 manual_curation mRNA 22725975 22728460 . - . ID=GSCOCT00020657001;Parent=GSCOCG00020657001;Name=Cc11_g06440 | |
| 61345 chr11 manual_curation polypeptide 22725975 22728460 . - . ID=GSCOCP00020657001;Dbxref=InterPro:IPR011011,SUPERFAMILY:SSF57903,SwissProt:Q7X6Y7,SwissProt:Q9FMS5,SwissProt:Q9ZUA9,TAIR:AT1G66170.1,TAIR:AT2G01810.1,TAIR:AT5G22260.1,TrEMBL:A5AHW0,TrEMBL:A9TNA4,TrEMBL:B9HJI7;Derives_from=GSCOCT00020657001;Name=Cc11_g06440;Ontology_term=CC_evidence_code:ISS,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative PHD finger protein At2g01810,CC_functional_completeness:complete,CC_gene:At2g01810,CC_gene:MS1,CC_gene:MMD1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020657001~ Putative PHD finger protein At2g01810~ At2g01810~ complete;original_location=complement(join(3001067..3001250%2C3000484..3000727%2C2998765..3000388));owner=coffea | |
| 61346 chr11 manual_curation exon 22725975 22727598 . - . Parent=GSCOCT00020657001 | |
| 61347 chr11 manual_curation exon 22727694 22727937 . - . Parent=GSCOCT00020657001 | |
| 61348 chr11 manual_curation exon 22728277 22728460 . - . Parent=GSCOCT00020657001 | |
| 61349 chr11 manual_curation CDS 22725975 22727598 . - 2 Parent=GSCOCT00020657001 | |
| 61350 chr11 manual_curation CDS 22727694 22727937 . - 1 Parent=GSCOCT00020657001 | |
| 61351 chr11 manual_curation CDS 22728277 22728460 . - 0 Parent=GSCOCT00020657001 | |
| 61352 chr11 manual_curation gene 22742174 22742725 . - . ID=GSCOCG00020658001;Name=Cc11_g06450 | |
| 61353 chr11 manual_curation mRNA 22742174 22742725 . - . ID=GSCOCT00020658001;Parent=GSCOCG00020658001;Name=Cc11_g06450 | |
| 61354 chr11 manual_curation polypeptide 22742174 22742725 . - . ID=GSCOCP00020658001;Dbxref=InterPro:IPR008930,SUPERFAMILY:SSF48239,SwissProt:A8C980,SwissProt:A8CDT2,SwissProt:Q08IT1,TAIR:AT1G66960.1,TAIR:AT1G78960.1,TAIR:AT1G78970.2,TrEMBL:F4YF84,TrEMBL:H2ER43,TrEMBL:Q6QZW8;Derives_from=GSCOCT00020658001;Name=Cc11_g06450;Ontology_term=CC_evidence_code:ISS,CC_EC_number:5.4.99.8,PRODUCT:Dammarenediol II synthase,CC_functional_completeness:fragment,CC_gene:PNA,CC_gene:BAS,CC_gene:M1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020658001~ Dammarenediol II synthase~ PNA~ fragment;original_location=complement(join(3015444..3015515%2C3015157..3015399%2C3014964..3015068));owner=coffea | |
| 61355 chr11 manual_curation exon 22742174 22742278 . - . Parent=GSCOCT00020658001 | |
| 61356 chr11 manual_curation exon 22742367 22742609 . - . Parent=GSCOCT00020658001 | |
| 61357 chr11 manual_curation exon 22742654 22742725 . - . Parent=GSCOCT00020658001 | |
| 61358 chr11 manual_curation CDS 22742174 22742278 . - 0 Parent=GSCOCT00020658001 | |
| 61359 chr11 manual_curation CDS 22742367 22742609 . - 0 Parent=GSCOCT00020658001 | |
| 61360 chr11 manual_curation CDS 22742654 22742725 . - 0 Parent=GSCOCT00020658001 | |
| 61361 chr11 manual_curation gene 22752156 22758442 . + . ID=GSCOCG00020659001;Name=Cc11_g06460 | |
| 61362 chr11 manual_curation mRNA 22752156 22758442 . + . ID=GSCOCT00020659001;Parent=GSCOCG00020659001;Name=Cc11_g06460 | |
| 61363 chr11 manual_curation polypeptide 22752156 22758442 . + . ID=GSCOCP00020659001;Dbxref=InterPro:IPR006153,PFAM:PF00999,SwissProt:Q9FFR9,SwissProt:Q9LUN4,SwissProt:Q9M353,TAIR:AT3G17630.1,TAIR:AT3G53720.1,TAIR:AT5G41610.1,TrEMBL:A5BEW1,TrEMBL:B9SP28,TrEMBL:F6HLG7;Derives_from=GSCOCT00020659001;Name=Cc11_g06460;Ontology_term=CC_evidence_code:ISS,GO:0006812,GO:0015299,GO:0016021,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Cation/H( ) antiporter 20,CC_functional_completeness:complete,CC_gene:CHX20,CC_gene:CHX18,CC_gene:CHX19;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020659001~ Cation/H( ) antiporter 20~ CHX20~ complete;original_location=join(3024946..3025125%2C3025235..3026320%2C3029913..3030830%2C3030906..3031232);owner=coffea | |
| 61364 chr11 manual_curation exon 22752156 22752335 . + . Parent=GSCOCT00020659001 | |
| 61365 chr11 manual_curation exon 22752445 22753530 . + . Parent=GSCOCT00020659001 | |
| 61366 chr11 manual_curation exon 22757123 22758040 . + . Parent=GSCOCT00020659001 | |
| 61367 chr11 manual_curation exon 22758116 22758442 . + . Parent=GSCOCT00020659001 | |
| 61368 chr11 manual_curation CDS 22752156 22752335 . + 0 Parent=GSCOCT00020659001 | |
| 61369 chr11 manual_curation CDS 22752445 22753530 . + 0 Parent=GSCOCT00020659001 | |
| 61370 chr11 manual_curation CDS 22757123 22758040 . + 0 Parent=GSCOCT00020659001 | |
| 61371 chr11 manual_curation CDS 22758116 22758442 . + 0 Parent=GSCOCT00020659001 | |
| 61372 chr11 manual_curation gene 22887748 22902612 . + . ID=GSCOCG00020663001;Name=Cc11_g06470 | |
| 61373 chr11 manual_curation mRNA 22887748 22902612 . + . ID=GSCOCT00020663001;Parent=GSCOCG00020663001;Name=Cc11_g06470 | |
| 61374 chr11 manual_curation polypeptide 22887748 22902612 . + . ID=GSCOCP00020663001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SMART:SM00369,SwissProt:C0LGQ5,SwissProt:Q9C9H7,SwissProt:Q9FL28,TAIR:AT2G34930.1,TAIR:AT3G05660.1,TAIR:AT3G11010.1,TrEMBL:B9HW18,TrEMBL:F6I5J3,TrEMBL:F6I5J4;Derives_from=GSCOCT00020663001;Name=Cc11_g06470;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:3.1.3.16,PRODUCT:Putative Receptor-like protein 12,CC_functional_completeness:complete,CC_gene:RLP12,CC_gene:FLS2,CC_gene:GSO1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020663001~ Putative Receptor-like protein 12~ RLP12~ complete;original_location=join(3160538..3160557%2C3160655..3161558%2C3169576..3170176%2C3170290..3171339%2C3175284..3175402);owner=coffea | |
| 61375 chr11 manual_curation exon 22887748 22887767 . + . Parent=GSCOCT00020663001 | |
| 61376 chr11 manual_curation exon 22887865 22888768 . + . Parent=GSCOCT00020663001 | |
| 61377 chr11 manual_curation exon 22896786 22897386 . + . Parent=GSCOCT00020663001 | |
| 61378 chr11 manual_curation exon 22897500 22898549 . + . Parent=GSCOCT00020663001 | |
| 61379 chr11 manual_curation exon 22902494 22902612 . + . Parent=GSCOCT00020663001 | |
| 61380 chr11 manual_curation CDS 22887748 22887767 . + 0 Parent=GSCOCT00020663001 | |
| 61381 chr11 manual_curation CDS 22887865 22888768 . + 2 Parent=GSCOCT00020663001 | |
| 61382 chr11 manual_curation CDS 22896786 22897386 . + 0 Parent=GSCOCT00020663001 | |
| 61383 chr11 manual_curation CDS 22897500 22898549 . + 1 Parent=GSCOCT00020663001 | |
| 61384 chr11 manual_curation CDS 22902494 22902612 . + 1 Parent=GSCOCT00020663001 | |
| 61385 chr11 manual_curation gene 22904609 22905706 . + . ID=GSCOCG00020664001;Name=Cc11_g06480 | |
| 61386 chr11 manual_curation mRNA 22904609 22905706 . + . ID=GSCOCT00020664001;Parent=GSCOCG00020664001;Name=Cc11_g06480 | |
| 61387 chr11 manual_curation polypeptide 22904609 22905706 . + . ID=GSCOCP00020664001;Derives_from=GSCOCT00020664001;Name=Cc11_g06480;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020664001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=3177399..3178496;owner=coffea | |
| 61388 chr11 manual_curation exon 22904609 22905706 . + . Parent=GSCOCT00020664001 | |
| 61389 chr11 manual_curation CDS 22904609 22905706 . + 0 Parent=GSCOCT00020664001 | |
| 61390 chr11 manual_curation gene 22909417 22911947 . + . ID=GSCOCG00020665001;Name=Cc11_g06490 | |
| 61391 chr11 manual_curation mRNA 22909417 22911947 . + . ID=GSCOCT00020665001;Parent=GSCOCG00020665001;Name=Cc11_g06490 | |
| 61392 chr11 manual_curation polypeptide 22909417 22911709 . + . ID=GSCOCP00020665001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SMART:SM00369,SwissProt:Q8VZG8,SwissProt:Q9C9H7,SwissProt:Q9FL28,TAIR:AT2G34930.1,TAIR:AT3G05650.1,TAIR:AT4G08850.1,TrEMBL:B9GFB5,TrEMBL:B9N9X7,TrEMBL:B9RMI5;Derives_from=GSCOCT00020665001;Name=Cc11_g06490;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:3.1.3.16,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At4g08850,CC_functional_completeness:complete,CC_gene:At4g08850,CC_gene:RLP12,CC_gene:FLS2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020665001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At4g08850~ At4g08850~ complete;original_location=join(3182207..3182285%2C3182407..3182522%2C3182616..3182811%2C3182971..3183734%2C3183875..3184419%2C3184478..3184499);owner=coffea | |
| 61393 chr11 manual_curation exon 22909417 22909495 . + . Parent=GSCOCT00020665001 | |
| 61394 chr11 manual_curation exon 22909617 22909732 . + . Parent=GSCOCT00020665001 | |
| 61395 chr11 manual_curation exon 22909826 22910021 . + . Parent=GSCOCT00020665001 | |
| 61396 chr11 manual_curation exon 22910181 22910944 . + . Parent=GSCOCT00020665001 | |
| 61397 chr11 manual_curation exon 22911085 22911629 . + . Parent=GSCOCT00020665001 | |
| 61398 chr11 manual_curation exon 22911688 22911947 . + . Parent=GSCOCT00020665001 | |
| 61399 chr11 manual_curation CDS 22909417 22909495 . + 0 Parent=GSCOCT00020665001 | |
| 61400 chr11 manual_curation CDS 22909617 22909732 . + 1 Parent=GSCOCT00020665001 | |
| 61401 chr11 manual_curation CDS 22909826 22910021 . + 0 Parent=GSCOCT00020665001 | |
| 61402 chr11 manual_curation CDS 22910181 22910944 . + 1 Parent=GSCOCT00020665001 | |
| 61403 chr11 manual_curation CDS 22911085 22911629 . + 0 Parent=GSCOCT00020665001 | |
| 61404 chr11 manual_curation CDS 22911688 22911709 . + 2 Parent=GSCOCT00020665001 | |
| 61405 chr11 manual_curation gene 22922011 22924336 . + . ID=GSCOCG00020666001;Name=Cc11_g06500 | |
| 61406 chr11 manual_curation mRNA 22922011 22924336 . + . ID=GSCOCT00020666001;Parent=GSCOCG00020666001;Name=Cc11_g06500 | |
| 61407 chr11 manual_curation polypeptide 22922011 22924336 . + . ID=GSCOCP00020666001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SMART:SM00369,SwissProt:Q8VZG8,SwissProt:Q9C9H7,SwissProt:Q9FL28,TAIR:AT2G34930.1,TAIR:AT3G05660.1,TAIR:AT3G11010.1,TrEMBL:B9GFB5,TrEMBL:B9HW18,TrEMBL:B9RMI5;Derives_from=GSCOCT00020666001;Name=Cc11_g06500;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At4g08850,CC_functional_completeness:complete,CC_gene:At4g08850,CC_gene:RLP12,CC_gene:FLS2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020666001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At4g08850~ At4g08850~ complete;original_location=join(3194801..3195339%2C3195454..3196288%2C3196338..3197126);owner=coffea | |
| 61408 chr11 manual_curation exon 22922011 22922549 . + . Parent=GSCOCT00020666001 | |
| 61409 chr11 manual_curation exon 22922664 22923498 . + . Parent=GSCOCT00020666001 | |
| 61410 chr11 manual_curation exon 22923548 22924336 . + . Parent=GSCOCT00020666001 | |
| 61411 chr11 manual_curation CDS 22922011 22922549 . + 0 Parent=GSCOCT00020666001 | |
| 61412 chr11 manual_curation CDS 22922664 22923498 . + 2 Parent=GSCOCT00020666001 | |
| 61413 chr11 manual_curation CDS 22923548 22924336 . + 0 Parent=GSCOCT00020666001 | |
| 61414 chr11 manual_curation gene 22934970 22936171 . + . ID=GSCOCG00020667001;Name=Cc11_g06510 | |
| 61415 chr11 manual_curation mRNA 22934970 22936171 . + . ID=GSCOCT00020667001;Parent=GSCOCG00020667001;Name=Cc11_g06510 | |
| 61416 chr11 manual_curation polypeptide 22934970 22935404 . + . ID=GSCOCP00020667001;Dbxref=TAIR:AT1G74170.1,TAIR:AT2G25470.1,TAIR:AT3G53240.1,TrEMBL:F6H9K0,TrEMBL:F6HD33,TrEMBL:F6I7G6;Derives_from=GSCOCT00020667001;Name=Cc11_g06510;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative receptor like protein 13,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020667001~ Putative receptor like protein 13~ unknown_gene~ fragment;original_location=3207760..3208194;owner=coffea | |
| 61417 chr11 manual_curation exon 22934970 22936171 . + . Parent=GSCOCT00020667001 | |
| 61418 chr11 manual_curation CDS 22934970 22935404 . + 0 Parent=GSCOCT00020667001 | |
| 61419 chr11 manual_curation gene 22948644 22953063 . + . ID=GSCOCG00020669001;Name=Cc11_g06520 | |
| 61420 chr11 manual_curation mRNA 22948644 22953063 . + . ID=GSCOCT00020669001;Parent=GSCOCG00020669001;Name=Cc11_g06520 | |
| 61421 chr11 manual_curation polypeptide 22949297 22951894 . + . ID=GSCOCP00020669001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SMART:SM00369,SwissProt:O82318,SwissProt:Q9C9H7,SwissProt:Q9ZUI0,TAIR:AT2G34930.1,TAIR:AT3G28890.1,TAIR:AT4G13880.1,TrEMBL:A5BB32,TrEMBL:B9GFB5,TrEMBL:B9RX42;Derives_from=GSCOCT00020669001;Name=Cc11_g06520;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:3.1.3.16,PRODUCT:Putative Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790,CC_functional_completeness:fragment,CC_gene:At2g25790,CC_gene:At2g24130,CC_gene:RLP12;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020669001~ Putative Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790~ At2g25790~ fragment;original_location=join(3222087..3222578%2C3223113..3223581%2C3223678..3224106%2C3224230..3224684);owner=coffea | |
| 61422 chr11 manual_curation exon 22952834 22953063 . + . Parent=GSCOCT00020669001 | |
| 61423 chr11 manual_curation exon 22948644 22949788 . + . Parent=GSCOCT00020669001 | |
| 61424 chr11 manual_curation exon 22950323 22950791 . + . Parent=GSCOCT00020669001 | |
| 61425 chr11 manual_curation exon 22950888 22951316 . + . Parent=GSCOCT00020669001 | |
| 61426 chr11 manual_curation exon 22951440 22952339 . + . Parent=GSCOCT00020669001 | |
| 61427 chr11 manual_curation CDS 22949297 22949788 . + 0 Parent=GSCOCT00020669001 | |
| 61428 chr11 manual_curation CDS 22950323 22950791 . + 0 Parent=GSCOCT00020669001 | |
| 61429 chr11 manual_curation CDS 22950888 22951316 . + 1 Parent=GSCOCT00020669001 | |
| 61430 chr11 manual_curation CDS 22951440 22951894 . + 1 Parent=GSCOCT00020669001 | |
| 61431 chr11 manual_curation gene 22957576 22959013 . + . ID=GSCOCG00020670001;Name=Cc11_g06530 | |
| 61432 chr11 manual_curation mRNA 22957576 22959013 . + . ID=GSCOCT00020670001;Parent=GSCOCG00020670001;Name=Cc11_g06530 | |
| 61433 chr11 manual_curation polypeptide 22957576 22958682 . + . ID=GSCOCP00020670001;Derives_from=GSCOCT00020670001;Name=Cc11_g06530;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020670001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=3230366..3231472;owner=coffea | |
| 61434 chr11 manual_curation exon 22957576 22959013 . + . Parent=GSCOCT00020670001 | |
| 61435 chr11 manual_curation CDS 22957576 22958682 . + 0 Parent=GSCOCT00020670001 | |
| 61436 chr11 manual_curation gene 22962956 22965887 . + . ID=GSCOCG00020671001;Name=Cc11_g06540 | |
| 61437 chr11 manual_curation mRNA 22962956 22965887 . + . ID=GSCOCT00020671001;Parent=GSCOCG00020671001;Name=Cc11_g06540 | |
| 61438 chr11 manual_curation polypeptide 22962956 22965887 . + . ID=GSCOCP00020671001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SMART:SM00369,SwissProt:Q8VZG8,SwissProt:Q9C9H7,SwissProt:Q9LHP4,TAIR:AT1G71390.1,TAIR:AT1G71400.1,TAIR:AT2G34930.1,TrEMBL:A5BB32,TrEMBL:B9HW18,TrEMBL:F6H6P2;Derives_from=GSCOCT00020671001;Name=Cc11_g06540;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:3.1.3.16,PRODUCT:Putative Receptor-like protein 12,CC_functional_completeness:complete,CC_gene:RLP12,CC_gene:At4g08850,CC_gene:RCH2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020671001~ Putative Receptor-like protein 12~ RLP12~ complete;original_location=join(3235746..3236076%2C3236185..3236315%2C3236769..3237252%2C3237337..3237875%2C3237966..3238311%2C3238388..3238677);owner=coffea | |
| 61439 chr11 manual_curation exon 22962956 22963286 . + . Parent=GSCOCT00020671001 | |
| 61440 chr11 manual_curation exon 22963395 22963525 . + . Parent=GSCOCT00020671001 | |
| 61441 chr11 manual_curation exon 22963979 22964462 . + . Parent=GSCOCT00020671001 | |
| 61442 chr11 manual_curation exon 22964547 22965085 . + . Parent=GSCOCT00020671001 | |
| 61443 chr11 manual_curation exon 22965176 22965521 . + . Parent=GSCOCT00020671001 | |
| 61444 chr11 manual_curation exon 22965598 22965887 . + . Parent=GSCOCT00020671001 | |
| 61445 chr11 manual_curation CDS 22962956 22963286 . + 0 Parent=GSCOCT00020671001 | |
| 61446 chr11 manual_curation CDS 22963395 22963525 . + 1 Parent=GSCOCT00020671001 | |
| 61447 chr11 manual_curation CDS 22963979 22964462 . + 0 Parent=GSCOCT00020671001 | |
| 61448 chr11 manual_curation CDS 22964547 22965085 . + 1 Parent=GSCOCT00020671001 | |
| 61449 chr11 manual_curation CDS 22965176 22965521 . + 0 Parent=GSCOCT00020671001 | |
| 61450 chr11 manual_curation CDS 22965598 22965887 . + 1 Parent=GSCOCT00020671001 | |
| 61451 chr11 manual_curation gene 22969306 22970580 . + . ID=GSCOCG00020672001;Name=Cc11_g06550 | |
| 61452 chr11 manual_curation mRNA 22969306 22970580 . + . ID=GSCOCT00020672001;Parent=GSCOCG00020672001;Name=Cc11_g06550 | |
| 61453 chr11 manual_curation polypeptide 22969306 22970580 . + . ID=GSCOCP00020672001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q60CZ8,SwissProt:Q6L3Z4,SwissProt:Q6L438,TAIR:AT1G50180.1,TAIR:AT3G46530.1,TAIR:AT3G50950.2,TrEMBL:G8E840,TrEMBL:G8E841,TrEMBL:G8E842;Derives_from=GSCOCT00020672001;Name=Cc11_g06550;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative NB-ARC domain-containing disease resistance protein,CC_functional_completeness:fragment,CC_gene:R1A-6,CC_gene:R1A-10,CC_gene:R1B-12;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020672001~ Putative NB-ARC domain-containing disease resistance protein~ R1A-6~ fragment;original_location=3242096..3243370;owner=coffea | |
| 61454 chr11 manual_curation exon 22969306 22970580 . + . Parent=GSCOCT00020672001 | |
| 61455 chr11 manual_curation CDS 22969306 22970580 . + 0 Parent=GSCOCT00020672001 | |
| 61456 chr11 manual_curation gene 22986348 22990467 . - . ID=GSCOCG00020675001;Name=Cc11_g06560 | |
| 61457 chr11 manual_curation mRNA 22986348 22990467 . - . ID=GSCOCT00020675001;Parent=GSCOCG00020675001;Name=Cc11_g06560 | |
| 61458 chr11 manual_curation polypeptide 22986348 22989014 . - . ID=GSCOCP00020675001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q6L3N7,SwissProt:Q6L3Z7,SwissProt:Q6L403,TAIR:AT1G53350.1,TAIR:AT3G46730.1,TAIR:AT5G35450.1,TrEMBL:A0FD16,TrEMBL:A0FD19,TrEMBL:A1X877;Derives_from=GSCOCT00020675001;Name=Cc11_g06560;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1B-14,CC_functional_completeness:fragment,CC_gene:R1B-14,CC_gene:R1B-17,CC_gene:R1C-3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020675001~ Putative late blight resistance protein homolog R1B-14~ R1B-14~ fragment;original_location=complement(3259138..3261804);owner=coffea | |
| 61459 chr11 manual_curation exon 22990343 22990467 . - . Parent=GSCOCT00020675001 | |
| 61460 chr11 manual_curation exon 22986348 22989089 . - . Parent=GSCOCT00020675001 | |
| 61461 chr11 manual_curation CDS 22986348 22989014 . - 0 Parent=GSCOCT00020675001 | |
| 61462 chr11 manual_curation gene 22994675 22997920 . + . ID=GSCOCG00020677001;Name=Cc11_g06570 | |
| 61463 chr11 manual_curation mRNA 22994675 22997920 . + . ID=GSCOCT00020677001;Parent=GSCOCG00020677001;Name=Cc11_g06570 | |
| 61464 chr11 manual_curation polypeptide 22995470 22997732 . + . ID=GSCOCP00020677001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR001395,InterPro:IPR012677,PANTHER:PTHR11732,PFAM:PF00076,PROFILE:PS50102,SMART:SM00360,TAIR:AT1G67950.3,TAIR:AT4G17720.1,TAIR:AT5G46870.1,TrEMBL:C6TI28,TrEMBL:F6HFB9,TrEMBL:G7LBH9;Derives_from=GSCOCT00020677001;Name=Cc11_g06570;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,GO:0016491,GO:0055114,CC_EC_number:missing_EC_number,PRODUCT:RNA-binding (RRM/RBD/RNP motifs) family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020677001~ RNA-binding (RRM/RBD/RNP motifs) family protein~ unknown_gene~ complete;original_location=join(3268260..3268337%2C3268566..3268672%2C3268749..3268824%2C3269623..3269703%2C3269950..3270522);owner=coffea | |
| 61465 chr11 manual_curation exon 22994675 22995547 . + . Parent=GSCOCT00020677001 | |
| 61466 chr11 manual_curation exon 22995776 22995882 . + . Parent=GSCOCT00020677001 | |
| 61467 chr11 manual_curation exon 22995959 22996034 . + . Parent=GSCOCT00020677001 | |
| 61468 chr11 manual_curation exon 22996833 22996913 . + . Parent=GSCOCT00020677001 | |
| 61469 chr11 manual_curation exon 22997160 22997920 . + . Parent=GSCOCT00020677001 | |
| 61470 chr11 manual_curation CDS 22995470 22995547 . + 0 Parent=GSCOCT00020677001 | |
| 61471 chr11 manual_curation CDS 22995776 22995882 . + 0 Parent=GSCOCT00020677001 | |
| 61472 chr11 manual_curation CDS 22995959 22996034 . + 2 Parent=GSCOCT00020677001 | |
| 61473 chr11 manual_curation CDS 22996833 22996913 . + 0 Parent=GSCOCT00020677001 | |
| 61474 chr11 manual_curation CDS 22997160 22997732 . + 0 Parent=GSCOCT00020677001 | |
| 61475 chr11 manual_curation gene 22998927 23003332 . - . ID=GSCOCG00020678001;Name=Cc11_g06580 | |
| 61476 chr11 manual_curation mRNA 22998927 23003332 . - . ID=GSCOCT00020678001;Parent=GSCOCG00020678001;Name=Cc11_g06580 | |
| 61477 chr11 manual_curation polypeptide 22998927 23003332 . - . ID=GSCOCP00020678001;Dbxref=GENE3D:G3DSA:1.10.472.10,InterPro:IPR004367,InterPro:IPR006670,InterPro:IPR006671,InterPro:IPR011028,InterPro:IPR013763,PFAM:PF00134,PFAM:PF02984,PROSITE:PS00292,SMART:SM00385,SUPERFAMILY:SSF47954,SwissProt:P46278,SwissProt:Q10PQ9,SwissProt:Q1PFW3,TAIR:AT1G14750.1,TAIR:AT3G11520.1,TAIR:AT5G06150.1,TrEMBL:A5B6H5,TrEMBL:B9SNG1,TrEMBL:F6HFC0;Derives_from=GSCOCT00020678001;Name=Cc11_g06580;Ontology_term=CC_evidence_code:ISS,GO:0005634,CC_EC_number:missing_EC_number,PRODUCT:Putative Cyclin-SDS,CC_functional_completeness:complete,CC_gene:SDS,CC_gene:Os03g0225200;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020678001~ Putative Cyclin-SDS~ SDS~ complete;original_location=complement(join(3275660..3276122%2C3275190..3275596%2C3274318..3274485%2C3273224..3273390%2C3272606..3272734%2C3272280..3272460%2C3271879..3271923%2C3271717..3271749));owner=coffea | |
| 61478 chr11 manual_curation exon 22998927 22998959 . - . Parent=GSCOCT00020678001 | |
| 61479 chr11 manual_curation exon 22999089 22999133 . - . Parent=GSCOCT00020678001 | |
| 61480 chr11 manual_curation exon 22999490 22999670 . - . Parent=GSCOCT00020678001 | |
| 61481 chr11 manual_curation exon 22999816 22999944 . - . Parent=GSCOCT00020678001 | |
| 61482 chr11 manual_curation exon 23000434 23000600 . - . Parent=GSCOCT00020678001 | |
| 61483 chr11 manual_curation exon 23001528 23001695 . - . Parent=GSCOCT00020678001 | |
| 61484 chr11 manual_curation exon 23002400 23002806 . - . Parent=GSCOCT00020678001 | |
| 61485 chr11 manual_curation exon 23002870 23003332 . - . Parent=GSCOCT00020678001 | |
| 61486 chr11 manual_curation CDS 22998927 22998959 . - 0 Parent=GSCOCT00020678001 | |
| 61487 chr11 manual_curation CDS 22999089 22999133 . - 0 Parent=GSCOCT00020678001 | |
| 61488 chr11 manual_curation CDS 22999490 22999670 . - 2 Parent=GSCOCT00020678001 | |
| 61489 chr11 manual_curation CDS 22999816 22999944 . - 2 Parent=GSCOCT00020678001 | |
| 61490 chr11 manual_curation CDS 23000434 23000600 . - 0 Parent=GSCOCT00020678001 | |
| 61491 chr11 manual_curation CDS 23001528 23001695 . - 0 Parent=GSCOCT00020678001 | |
| 61492 chr11 manual_curation CDS 23002400 23002806 . - 1 Parent=GSCOCT00020678001 | |
| 61493 chr11 manual_curation CDS 23002870 23003332 . - 0 Parent=GSCOCT00020678001 | |
| 61494 chr11 manual_curation gene 23004950 23013898 . + . ID=GSCOCG00020679001;Name=Cc11_g06590 | |
| 61495 chr11 manual_curation mRNA 23004950 23013898 . + . ID=GSCOCT00020679001;Parent=GSCOCG00020679001;Name=Cc11_g06590 | |
| 61496 chr11 manual_curation polypeptide 23005777 23013627 . + . ID=GSCOCP00020679001;Dbxref=InterPro:IPR013176,PFAM:PF08217,SwissProt:P86790,SwissProt:P86791,SwissProt:Q0VD30,TAIR:AT1G16020.1,TAIR:AT1G80910.1,TrEMBL:B9HJI5,TrEMBL:B9S0Y5,TrEMBL:D7T8I4;Derives_from=GSCOCT00020679001;Name=Cc11_g06590;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF1712),CC_functional_completeness:complete,CC_gene:CCZ1,CC_gene:CCZ1B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020679001~ Protein of unknown function (DUF1712)~ CCZ1~ complete;original_location=join(3278567..3278748%2C3279534..3279627%2C3280772..3280955%2C3281055..3281093%2C3281202..3281311%2C3282703..3282798%2C3283057..3283515%2C3284196..3284351%2C3284634..3284863%2C3286384..3286417);owner=coffea | |
| 61497 chr11 manual_curation exon 23004950 23005150 . + . Parent=GSCOCT00020679001 | |
| 61498 chr11 manual_curation exon 23005741 23005958 . + . Parent=GSCOCT00020679001 | |
| 61499 chr11 manual_curation exon 23006744 23006837 . + . Parent=GSCOCT00020679001 | |
| 61500 chr11 manual_curation exon 23007982 23008165 . + . Parent=GSCOCT00020679001 | |
| 61501 chr11 manual_curation exon 23008265 23008303 . + . Parent=GSCOCT00020679001 | |
| 61502 chr11 manual_curation exon 23008412 23008521 . + . Parent=GSCOCT00020679001 | |
| 61503 chr11 manual_curation exon 23009913 23010008 . + . Parent=GSCOCT00020679001 | |
| 61504 chr11 manual_curation exon 23010267 23010725 . + . Parent=GSCOCT00020679001 | |
| 61505 chr11 manual_curation exon 23011406 23011561 . + . Parent=GSCOCT00020679001 | |
| 61506 chr11 manual_curation exon 23011844 23012073 . + . Parent=GSCOCT00020679001 | |
| 61507 chr11 manual_curation exon 23013594 23013898 . + . Parent=GSCOCT00020679001 | |
| 61508 chr11 manual_curation CDS 23005777 23005958 . + 0 Parent=GSCOCT00020679001 | |
| 61509 chr11 manual_curation CDS 23006744 23006837 . + 2 Parent=GSCOCT00020679001 | |
| 61510 chr11 manual_curation CDS 23007982 23008165 . + 0 Parent=GSCOCT00020679001 | |
| 61511 chr11 manual_curation CDS 23008265 23008303 . + 1 Parent=GSCOCT00020679001 | |
| 61512 chr11 manual_curation CDS 23008412 23008521 . + 1 Parent=GSCOCT00020679001 | |
| 61513 chr11 manual_curation CDS 23009913 23010008 . + 0 Parent=GSCOCT00020679001 | |
| 61514 chr11 manual_curation CDS 23010267 23010725 . + 0 Parent=GSCOCT00020679001 | |
| 61515 chr11 manual_curation CDS 23011406 23011561 . + 0 Parent=GSCOCT00020679001 | |
| 61516 chr11 manual_curation CDS 23011844 23012073 . + 0 Parent=GSCOCT00020679001 | |
| 61517 chr11 manual_curation CDS 23013594 23013627 . + 2 Parent=GSCOCT00020679001 | |
| 61518 chr11 manual_curation gene 23025254 23026368 . + . ID=GSCOCG00020681001;Name=Cc11_g06600 | |
| 61519 chr11 manual_curation mRNA 23025254 23026368 . + . ID=GSCOCT00020681001;Parent=GSCOCG00020681001;Name=Cc11_g06600 | |
| 61520 chr11 manual_curation polypeptide 23025590 23026118 . + . ID=GSCOCP00020681001;Dbxref=InterPro:IPR001163,InterPro:IPR006649,InterPro:IPR010920,PFAM:PF01423,SMART:SM00651,SUPERFAMILY:SSF50182,SwissProt:O14036,SwissProt:Q06217,SwissProt:Q18786,SwissProt:Q54NC5;Derives_from=GSCOCT00020681001;Name=Cc11_g06600;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Probable small nuclear ribonucleoprotein Sm D2,CC_functional_completeness:fragment,CC_gene:snrpd2,CC_gene:SmD2,CC_gene:Snrpd2,CC_gene:SNRPD2,CC_gene:snr-4,CC_gene:smd2,CC_gene:SMD2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020681001~ Probable small nuclear ribonucleoprotein Sm D2~ snrpd2~ fragment;original_location=join(3298380..3298406%2C3298591..3298695%2C3298792..3298908);owner=coffea | |
| 61521 chr11 manual_curation exon 23025254 23025616 . + . Parent=GSCOCT00020681001 | |
| 61522 chr11 manual_curation exon 23025801 23025905 . + . Parent=GSCOCT00020681001 | |
| 61523 chr11 manual_curation exon 23026002 23026368 . + . Parent=GSCOCT00020681001 | |
| 61524 chr11 manual_curation CDS 23025590 23025616 . + 0 Parent=GSCOCT00020681001 | |
| 61525 chr11 manual_curation CDS 23025801 23025905 . + 0 Parent=GSCOCT00020681001 | |
| 61526 chr11 manual_curation CDS 23026002 23026118 . + 0 Parent=GSCOCT00020681001 | |
| 61527 chr11 manual_curation gene 23029694 23040726 . + . ID=GSCOCG00020682001;Name=Cc11_g06610 | |
| 61528 chr11 manual_curation mRNA 23029694 23040726 . + . ID=GSCOCT00020682001;Parent=GSCOCG00020682001;Name=Cc11_g06610 | |
| 61529 chr11 manual_curation polypeptide 23029694 23040726 . + . ID=GSCOCP00020682001;Dbxref=InterPro:IPR006094,InterPro:IPR007173,InterPro:IPR010030,InterPro:IPR016166,PFAM:PF01565,PFAM:PF04030,PROFILE:PS51387,SUPERFAMILY:SSF56176,SwissProt:Q3ZC33,SwissProt:Q8HXW0,SwissProt:Q90YK3,TAIR:AT1G32300.1,TAIR:AT2G46750.1,TAIR:AT2G46760.1,TIGRFAMs:TIGR01677,TrEMBL:B9GRQ1,TrEMBL:B9GRQ2,TrEMBL:F6I2X5;Derives_from=GSCOCT00020682001;Name=Cc11_g06610;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0016020,GO:0016491,GO:0050660,GO:0055114,CC_EC_number:1.1.3.8,PRODUCT:D-arabinono-1%2C4-lactone oxidase family protein,CC_functional_completeness:complete,CC_gene:GULO;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020682001~ D-arabinono-1%2C4-lactone oxidase family protein~ GULO~ complete;original_location=join(3302484..3303158%2C3303757..3304012%2C3308787..3309319%2C3309380..3309649%2C3311684..3311939%2C3312038..3312139%2C3312804..3313516);owner=coffea | |
| 61530 chr11 manual_curation exon 23029694 23030368 . + . Parent=GSCOCT00020682001 | |
| 61531 chr11 manual_curation exon 23030967 23031222 . + . Parent=GSCOCT00020682001 | |
| 61532 chr11 manual_curation exon 23035997 23036529 . + . Parent=GSCOCT00020682001 | |
| 61533 chr11 manual_curation exon 23036590 23036859 . + . Parent=GSCOCT00020682001 | |
| 61534 chr11 manual_curation exon 23038894 23039149 . + . Parent=GSCOCT00020682001 | |
| 61535 chr11 manual_curation exon 23039248 23039349 . + . Parent=GSCOCT00020682001 | |
| 61536 chr11 manual_curation exon 23040014 23040726 . + . Parent=GSCOCT00020682001 | |
| 61537 chr11 manual_curation CDS 23029694 23030368 . + 0 Parent=GSCOCT00020682001 | |
| 61538 chr11 manual_curation CDS 23030967 23031222 . + 0 Parent=GSCOCT00020682001 | |
| 61539 chr11 manual_curation CDS 23035997 23036529 . + 1 Parent=GSCOCT00020682001 | |
| 61540 chr11 manual_curation CDS 23036590 23036859 . + 0 Parent=GSCOCT00020682001 | |
| 61541 chr11 manual_curation CDS 23038894 23039149 . + 0 Parent=GSCOCT00020682001 | |
| 61542 chr11 manual_curation CDS 23039248 23039349 . + 1 Parent=GSCOCT00020682001 | |
| 61543 chr11 manual_curation CDS 23040014 23040726 . + 1 Parent=GSCOCT00020682001 | |
| 61544 chr11 manual_curation gene 23049464 23052969 . + . ID=GSCOCG00020683001;Name=Cc11_g06620 | |
| 61545 chr11 manual_curation mRNA 23049464 23052969 . + . ID=GSCOCT00020683001;Parent=GSCOCG00020683001;Name=Cc11_g06620 | |
| 61546 chr11 manual_curation polypeptide 23049464 23052969 . + . ID=GSCOCP00020683001;Dbxref=GENE3D:G3DSA:3.30.465.20,InterPro:IPR006094,InterPro:IPR007173,InterPro:IPR010030,InterPro:IPR016166,InterPro:IPR016168,PFAM:PF01565,PFAM:PF04030,PROFILE:PS51387,SUPERFAMILY:SSF56176,SwissProt:P10867,SwissProt:P58710,SwissProt:Q8HXW0,TAIR:AT2G46740.1,TAIR:AT2G46750.1,TAIR:AT2G46760.1,TIGRFAMs:TIGR01677,TrEMBL:B9GRQ1,TrEMBL:B9SVF9,TrEMBL:I1MKE1;Derives_from=GSCOCT00020683001;Name=Cc11_g06620;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0016020,GO:0016491,GO:0050660,GO:0055114,CC_EC_number:1.1.3.8,PRODUCT:D-arabinono-1%2C4-lactone oxidase family protein,CC_functional_completeness:complete,CC_gene:Gulo,CC_gene:GULO;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020683001~ D-arabinono-1%2C4-lactone oxidase family protein~ Gulo~ complete;original_location=join(3322254..3322682%2C3323250..3323505%2C3323612..3323713%2C3325047..3325759);owner=coffea | |
| 61547 chr11 manual_curation exon 23049464 23049892 . + . Parent=GSCOCT00020683001 | |
| 61548 chr11 manual_curation exon 23050460 23050715 . + . Parent=GSCOCT00020683001 | |
| 61549 chr11 manual_curation exon 23050822 23050923 . + . Parent=GSCOCT00020683001 | |
| 61550 chr11 manual_curation exon 23052257 23052969 . + . Parent=GSCOCT00020683001 | |
| 61551 chr11 manual_curation CDS 23049464 23049892 . + 0 Parent=GSCOCT00020683001 | |
| 61552 chr11 manual_curation CDS 23050460 23050715 . + 0 Parent=GSCOCT00020683001 | |
| 61553 chr11 manual_curation CDS 23050822 23050923 . + 1 Parent=GSCOCT00020683001 | |
| 61554 chr11 manual_curation CDS 23052257 23052969 . + 1 Parent=GSCOCT00020683001 | |
| 61555 chr11 manual_curation gene 23060348 23064283 . + . ID=GSCOCG00020684001;Name=Cc11_g06630 | |
| 61556 chr11 manual_curation mRNA 23060348 23064283 . + . ID=GSCOCT00020684001;Parent=GSCOCG00020684001;Name=Cc11_g06630 | |
| 61557 chr11 manual_curation polypeptide 23060348 23063278 . + . ID=GSCOCP00020684001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SMART:SM00369,SwissProt:C0LGQ5,SwissProt:Q9FL28,SwissProt:Q9LP24,TAIR:AT2G34930.1,TAIR:AT3G05660.1,TAIR:AT3G11010.1,TrEMBL:A5BZ90,TrEMBL:F6H3Z2,TrEMBL:F6H6P5;Derives_from=GSCOCT00020684001;Name=Cc11_g06630;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:3.1.3.16,PRODUCT:Putative LRR receptor-like serine/threonine-protein kinase FLS2,CC_functional_completeness:fragment,CC_gene:FLS2,CC_gene:At1g35710,CC_gene:GSO1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020684001~ Putative LRR receptor-like serine/threonine-protein kinase FLS2~ FLS2~ fragment;original_location=join(3333138..3334000%2C3334064..3334680%2C3334903..3336068);owner=coffea | |
| 61558 chr11 manual_curation exon 23060348 23061210 . + . Parent=GSCOCT00020684001 | |
| 61559 chr11 manual_curation exon 23061274 23061890 . + . Parent=GSCOCT00020684001 | |
| 61560 chr11 manual_curation exon 23062113 23064283 . + . Parent=GSCOCT00020684001 | |
| 61561 chr11 manual_curation CDS 23060348 23061210 . + 0 Parent=GSCOCT00020684001 | |
| 61562 chr11 manual_curation CDS 23061274 23061890 . + 2 Parent=GSCOCT00020684001 | |
| 61563 chr11 manual_curation CDS 23062113 23063278 . + 1 Parent=GSCOCT00020684001 | |
| 61564 chr11 manual_curation gene 23076371 23079736 . + . ID=GSCOCG00020687001;Name=Cc11_g06640 | |
| 61565 chr11 manual_curation mRNA 23076371 23079736 . + . ID=GSCOCT00020687001;Parent=GSCOCG00020687001;Name=Cc11_g06640 | |
| 61566 chr11 manual_curation polypeptide 23076709 23079478 . + . ID=GSCOCP00020687001;Dbxref=GENE3D:G3DSA:3.30.465.20,InterPro:IPR006094,InterPro:IPR007173,InterPro:IPR010030,InterPro:IPR016166,InterPro:IPR016168,PFAM:PF01565,PFAM:PF04030,PROFILE:PS51387,SUPERFAMILY:SSF56176,SwissProt:P10867,SwissProt:P58710,SwissProt:Q8HXW0,TAIR:AT2G46740.1,TAIR:AT2G46750.1,TAIR:AT2G46760.1,TIGRFAMs:TIGR01677,TrEMBL:B9GRQ1,TrEMBL:B9GRQ2,TrEMBL:B9S3D0;Derives_from=GSCOCT00020687001;Name=Cc11_g06640;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0016020,GO:0016491,GO:0050660,GO:0055114,CC_EC_number:1.1.3.8,PRODUCT:D-arabinono-1%2C4-lactone oxidase family protein,CC_functional_completeness:complete,CC_gene:GULO,CC_gene:Gulo;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020687001~ D-arabinono-1%2C4-lactone oxidase family protein~ GULO~ complete;original_location=join(3349499..3349930%2C3350080..3350335%2C3350446..3350550%2C3350711..3350812%2C3351535..3352268);owner=coffea | |
| 61567 chr11 manual_curation exon 23076371 23077140 . + . Parent=GSCOCT00020687001 | |
| 61568 chr11 manual_curation exon 23077290 23077545 . + . Parent=GSCOCT00020687001 | |
| 61569 chr11 manual_curation exon 23077656 23077760 . + . Parent=GSCOCT00020687001 | |
| 61570 chr11 manual_curation exon 23077921 23078022 . + . Parent=GSCOCT00020687001 | |
| 61571 chr11 manual_curation exon 23078745 23079736 . + . Parent=GSCOCT00020687001 | |
| 61572 chr11 manual_curation CDS 23076709 23077140 . + 0 Parent=GSCOCT00020687001 | |
| 61573 chr11 manual_curation CDS 23077290 23077545 . + 0 Parent=GSCOCT00020687001 | |
| 61574 chr11 manual_curation CDS 23077656 23077760 . + 1 Parent=GSCOCT00020687001 | |
| 61575 chr11 manual_curation CDS 23077921 23078022 . + 1 Parent=GSCOCT00020687001 | |
| 61576 chr11 manual_curation CDS 23078745 23079478 . + 1 Parent=GSCOCT00020687001 | |
| 61577 chr11 manual_curation gene 23091828 23096454 . + . ID=GSCOCG00020689001;Name=Cc11_g06650 | |
| 61578 chr11 manual_curation mRNA 23091828 23096454 . + . ID=GSCOCT00020689001;Parent=GSCOCG00020689001;Name=Cc11_g06650 | |
| 61579 chr11 manual_curation polypeptide 23092140 23096334 . + . ID=GSCOCP00020689001;Dbxref=InterPro:IPR006094,InterPro:IPR007173,InterPro:IPR010030,InterPro:IPR016166,PFAM:PF01565,PFAM:PF04030,PROFILE:PS51387,SUPERFAMILY:SSF56176,TAIR:AT2G46740.1,TAIR:AT2G46750.1,TAIR:AT2G46760.1,TIGRFAMs:TIGR01677,TrEMBL:B9S3D0,TrEMBL:I1MKE1,TrEMBL:I1NCQ3;Derives_from=GSCOCT00020689001;Name=Cc11_g06650;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0016020,GO:0016491,GO:0050660,GO:0055114,CC_EC_number:1.1.3.41,PRODUCT:D-arabinono-1%2C4-lactone oxidase family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020689001~ D-arabinono-1%2C4-lactone oxidase family protein~ unknown_gene~ complete;original_location=join(3364930..3365358%2C3366072..3366327%2C3366681..3366782%2C3368409..3369124);owner=coffea | |
| 61580 chr11 manual_curation exon 23091828 23092568 . + . Parent=GSCOCT00020689001 | |
| 61581 chr11 manual_curation exon 23093282 23093537 . + . Parent=GSCOCT00020689001 | |
| 61582 chr11 manual_curation exon 23093891 23093992 . + . Parent=GSCOCT00020689001 | |
| 61583 chr11 manual_curation exon 23095619 23096454 . + . Parent=GSCOCT00020689001 | |
| 61584 chr11 manual_curation CDS 23092140 23092568 . + 0 Parent=GSCOCT00020689001 | |
| 61585 chr11 manual_curation CDS 23093282 23093537 . + 0 Parent=GSCOCT00020689001 | |
| 61586 chr11 manual_curation CDS 23093891 23093992 . + 1 Parent=GSCOCT00020689001 | |
| 61587 chr11 manual_curation CDS 23095619 23096334 . + 1 Parent=GSCOCT00020689001 | |
| 61588 chr11 manual_curation gene 23099061 23102357 . + . ID=GSCOCG00020690001;Name=Cc11_g06660 | |
| 61589 chr11 manual_curation mRNA 23099061 23102357 . + . ID=GSCOCT00020690001;Parent=GSCOCG00020690001;Name=Cc11_g06660 | |
| 61590 chr11 manual_curation polypeptide 23099133 23101335 . + . ID=GSCOCP00020690001;Dbxref=InterPro:IPR008217,PFAM:PF01988,SwissProt:Q6ERE5,SwissProt:Q6MWE5,SwissProt:Q9ZUA5,TAIR:AT2G01770.1,TrEMBL:A5BKP9,TrEMBL:A9PEU8,TrEMBL:F6HFC1;Derives_from=GSCOCT00020690001;Name=Cc11_g06660;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Vacuolar iron transporter 1,CC_functional_completeness:complete,CC_gene:VIT1,CC_gene:VIT1.2,CC_gene:VIT1.1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020690001~ Vacuolar iron transporter 1~ VIT1~ complete;original_location=join(3371923..3372143%2C3372642..3372727%2C3372852..3372966%2C3373828..3374125);owner=coffea | |
| 61591 chr11 manual_curation exon 23099061 23099353 . + . Parent=GSCOCT00020690001 | |
| 61592 chr11 manual_curation exon 23099852 23099937 . + . Parent=GSCOCT00020690001 | |
| 61593 chr11 manual_curation exon 23100062 23100176 . + . Parent=GSCOCT00020690001 | |
| 61594 chr11 manual_curation exon 23101038 23102357 . + . Parent=GSCOCT00020690001 | |
| 61595 chr11 manual_curation CDS 23099133 23099353 . + 0 Parent=GSCOCT00020690001 | |
| 61596 chr11 manual_curation CDS 23099852 23099937 . + 2 Parent=GSCOCT00020690001 | |
| 61597 chr11 manual_curation CDS 23100062 23100176 . + 1 Parent=GSCOCT00020690001 | |
| 61598 chr11 manual_curation CDS 23101038 23101335 . + 2 Parent=GSCOCT00020690001 | |
| 61599 chr11 manual_curation gene 23102461 23106215 . - . ID=GSCOCG00020691001;Name=Cc11_g06670 | |
| 61600 chr11 manual_curation mRNA 23102461 23106215 . - . ID=GSCOCT00020691001;Parent=GSCOCG00020691001;Name=Cc11_g06670 | |
| 61601 chr11 manual_curation polypeptide 23102461 23105757 . - . ID=GSCOCP00020691001;Dbxref=GENE3D:G3DSA:1.10.10.10,InterPro:IPR000232,InterPro:IPR011991,PFAM:PF00447,PRINTS:PR00056,SMART:SM00415,SwissProt:Q40152,SwissProt:Q84T61,SwissProt:Q9S7U5,TAIR:AT1G32330.1,TAIR:AT1G67970.1,TAIR:AT5G16820.1,TrEMBL:A9PGC3,TrEMBL:B9HJI4,TrEMBL:B9SNF4;Derives_from=GSCOCT00020691001;Name=Cc11_g06670;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0005634,GO:0043565,CC_EC_number:missing_EC_number,PRODUCT:Putative Heat stress transcription factor A-8,CC_functional_completeness:fragment,CC_gene:HSFA8,CC_gene:HSFA1,CC_gene:HSF8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020691001~ Putative Heat stress transcription factor A-8~ HSFA8~ fragment;original_location=complement(join(3378329..3378547%2C3375251..3376180));owner=coffea | |
| 61602 chr11 manual_curation exon 23102461 23103390 . - . Parent=GSCOCT00020691001 | |
| 61603 chr11 manual_curation exon 23105539 23106215 . - . Parent=GSCOCT00020691001 | |
| 61604 chr11 manual_curation CDS 23102461 23103390 . - 0 Parent=GSCOCT00020691001 | |
| 61605 chr11 manual_curation CDS 23105539 23105757 . - 0 Parent=GSCOCT00020691001 | |
| 61606 chr11 manual_curation gene 23108379 23112988 . + . ID=GSCOCG00020692001;Name=Cc11_g06680 | |
| 61607 chr11 manual_curation mRNA 23108379 23112988 . + . ID=GSCOCT00020692001;Parent=GSCOCG00020692001;Name=Cc11_g06680 | |
| 61608 chr11 manual_curation polypeptide 23108496 23112473 . + . ID=GSCOCP00020692001;Dbxref=InterPro:IPR002935,PANTHER:PTHR10509,PFAM:PF01596,SwissProt:P93711,SwissProt:Q9C9W3,SwissProt:Q9C9W4,TAIR:AT1G24735.2,TAIR:AT1G67980.1,TAIR:AT1G67990.1,TrEMBL:A9PCU8,TrEMBL:B9HVT7,TrEMBL:B9SNF3;Derives_from=GSCOCT00020692001;Name=Cc11_g06680;Ontology_term=CC_evidence_code:ISS,GO:0008171,CC_EC_number:2.1.1.104,PRODUCT:Caffeoyl-CoA O-methyltransferase,CC_functional_completeness:complete,CC_gene:At1g67980,CC_gene:At1g67990;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020692001~ Caffeoyl-CoA O-methyltransferase~ At1g67980~ complete;original_location=join(3381286..3381345%2C3382791..3382876%2C3384028..3384172%2C3384405..3384536%2C3384970..3385263);owner=coffea | |
| 61609 chr11 manual_curation exon 23108379 23108555 . + . Parent=GSCOCT00020692001 | |
| 61610 chr11 manual_curation exon 23110001 23110086 . + . Parent=GSCOCT00020692001 | |
| 61611 chr11 manual_curation exon 23111238 23111382 . + . Parent=GSCOCT00020692001 | |
| 61612 chr11 manual_curation exon 23111615 23111746 . + . Parent=GSCOCT00020692001 | |
| 61613 chr11 manual_curation exon 23112180 23112988 . + . Parent=GSCOCT00020692001 | |
| 61614 chr11 manual_curation CDS 23108496 23108555 . + 0 Parent=GSCOCT00020692001 | |
| 61615 chr11 manual_curation CDS 23110001 23110086 . + 0 Parent=GSCOCT00020692001 | |
| 61616 chr11 manual_curation CDS 23111238 23111382 . + 2 Parent=GSCOCT00020692001 | |
| 61617 chr11 manual_curation CDS 23111615 23111746 . + 0 Parent=GSCOCT00020692001 | |
| 61618 chr11 manual_curation CDS 23112180 23112473 . + 0 Parent=GSCOCT00020692001 | |
| 61619 chr11 manual_curation gene 23125739 23130211 . + . ID=GSCOCG00020694001;Name=Cc11_g06690 | |
| 61620 chr11 manual_curation mRNA 23125739 23130211 . + . ID=GSCOCT00020694001;Parent=GSCOCG00020694001;Name=Cc11_g06690 | |
| 61621 chr11 manual_curation polypeptide 23126951 23129786 . + . ID=GSCOCP00020694001;Dbxref=InterPro:IPR001830,InterPro:IPR003337,InterPro:IPR006379,PFAM:PF00982,PFAM:PF02358,SwissProt:O23617,SwissProt:Q94AH8,SwissProt:Q9LRA7,TAIR:AT1G23870.1,TAIR:AT1G68020.2,TAIR:AT4G17770.1,TIGRFAMs:TIGR00685,TIGRFAMs:TIGR01484,TrEMBL:A5AY88,TrEMBL:B9HJI1,TrEMBL:G4Y3P1;Derives_from=GSCOCT00020694001;Name=Cc11_g06690;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005992,GO:0008152,CC_EC_number:2.4.1.15,PRODUCT:Alpha%2Calpha-trehalose-phosphate synthase [UDP-forming] 6,CC_functional_completeness:fragment,CC_gene:TPS6,CC_gene:TPS5,CC_gene:TPS9;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020694001~ Alpha%2Calpha-trehalose-phosphate synthase [UDP-forming] 6~ TPS6~ fragment;original_location=join(3399741..3401161%2C3401265..3401538%2C3402289..3402576);owner=coffea | |
| 61622 chr11 manual_curation exon 23125739 23128371 . + . Parent=GSCOCT00020694001 | |
| 61623 chr11 manual_curation exon 23128475 23128748 . + . Parent=GSCOCT00020694001 | |
| 61624 chr11 manual_curation exon 23129499 23130211 . + . Parent=GSCOCT00020694001 | |
| 61625 chr11 manual_curation CDS 23126951 23128371 . + 0 Parent=GSCOCT00020694001 | |
| 61626 chr11 manual_curation CDS 23128475 23128748 . + 2 Parent=GSCOCT00020694001 | |
| 61627 chr11 manual_curation CDS 23129499 23129786 . + 0 Parent=GSCOCT00020694001 | |
| 61628 chr11 manual_curation gene 23145669 23152247 . + . ID=GSCOCG00020695001;Name=Cc11_g06700 | |
| 61629 chr11 manual_curation mRNA 23145669 23152247 . + . ID=GSCOCT00020695001;Parent=GSCOCG00020695001;Name=Cc11_g06700 | |
| 61630 chr11 manual_curation polypeptide 23145784 23152247 . + . ID=GSCOCP00020695001;Dbxref=InterPro:IPR020864,PFAM:PF01823,PROFILE:PS51412,SMART:SM00457,SwissProt:Q8L612,SwissProt:Q9SGN6,SwissProt:Q9STW5,TAIR:AT1G14780.1,TAIR:AT1G28380.1,TAIR:AT4G24290.2,TrEMBL:B9HJI0,TrEMBL:D7T8J2,TrEMBL:I1KQD2;Derives_from=GSCOCT00020695001;Name=Cc11_g06700;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:MACPF domain-containing protein At1g14780,CC_functional_completeness:complete,CC_gene:At1g14780,CC_gene:At4g24290,CC_gene:NSL1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020695001~ MACPF domain-containing protein At1g14780~ At1g14780~ complete;original_location=join(3418574..3418810%2C3418943..3419184%2C3420874..3421075%2C3421474..3421548%2C3422657..3422840%2C3423189..3423358%2C3423688..3423752%2C3424422..3425037);owner=coffea | |
| 61631 chr11 manual_curation exon 23145669 23146020 . + . Parent=GSCOCT00020695001 | |
| 61632 chr11 manual_curation exon 23146153 23146394 . + . Parent=GSCOCT00020695001 | |
| 61633 chr11 manual_curation exon 23148084 23148285 . + . Parent=GSCOCT00020695001 | |
| 61634 chr11 manual_curation exon 23148684 23148758 . + . Parent=GSCOCT00020695001 | |
| 61635 chr11 manual_curation exon 23149867 23150050 . + . Parent=GSCOCT00020695001 | |
| 61636 chr11 manual_curation exon 23150399 23150568 . + . Parent=GSCOCT00020695001 | |
| 61637 chr11 manual_curation exon 23150898 23150962 . + . Parent=GSCOCT00020695001 | |
| 61638 chr11 manual_curation exon 23151632 23152247 . + . Parent=GSCOCT00020695001 | |
| 61639 chr11 manual_curation CDS 23145784 23146020 . + 0 Parent=GSCOCT00020695001 | |
| 61640 chr11 manual_curation CDS 23146153 23146394 . + 0 Parent=GSCOCT00020695001 | |
| 61641 chr11 manual_curation CDS 23148084 23148285 . + 2 Parent=GSCOCT00020695001 | |
| 61642 chr11 manual_curation CDS 23148684 23148758 . + 0 Parent=GSCOCT00020695001 | |
| 61643 chr11 manual_curation CDS 23149867 23150050 . + 0 Parent=GSCOCT00020695001 | |
| 61644 chr11 manual_curation CDS 23150399 23150568 . + 1 Parent=GSCOCT00020695001 | |
| 61645 chr11 manual_curation CDS 23150898 23150962 . + 0 Parent=GSCOCT00020695001 | |
| 61646 chr11 manual_curation CDS 23151632 23152247 . + 2 Parent=GSCOCT00020695001 | |
| 61647 chr11 manual_curation gene 23155969 23157764 . + . ID=GSCOCG00020696001;Name=Cc11_g06710 | |
| 61648 chr11 manual_curation mRNA 23155969 23157764 . + . ID=GSCOCT00020696001;Parent=GSCOCG00020696001;Name=Cc11_g06710 | |
| 61649 chr11 manual_curation polypeptide 23155969 23157618 . + . ID=GSCOCP00020696001;Dbxref=InterPro:IPR004158,PFAM:PF03140,SwissProt:Q9SD53,TAIR:AT3G50120.1,TAIR:AT3G50150.1,TAIR:AT3G50170.1,TrEMBL:A5AFY5,TrEMBL:B9RG36,TrEMBL:F6HJ92;Derives_from=GSCOCT00020696001;Name=Cc11_g06710;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative UPF0481 protein At3g47200,CC_functional_completeness:complete,CC_gene:At3g47200;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020696001~ Putative UPF0481 protein At3g47200~ At3g47200~ complete;original_location=join(3428759..3429405%2C3429514..3429572%2C3429777..3430408);owner=coffea | |
| 61650 chr11 manual_curation exon 23155969 23156615 . + . Parent=GSCOCT00020696001 | |
| 61651 chr11 manual_curation exon 23156724 23156782 . + . Parent=GSCOCT00020696001 | |
| 61652 chr11 manual_curation exon 23156987 23157764 . + . Parent=GSCOCT00020696001 | |
| 61653 chr11 manual_curation CDS 23155969 23156615 . + 0 Parent=GSCOCT00020696001 | |
| 61654 chr11 manual_curation CDS 23156724 23156782 . + 2 Parent=GSCOCT00020696001 | |
| 61655 chr11 manual_curation CDS 23156987 23157618 . + 1 Parent=GSCOCT00020696001 | |
| 61656 chr11 manual_curation gene 23158509 23160899 . - . ID=GSCOCG00020697001;Name=Cc11_g06720 | |
| 61657 chr11 manual_curation mRNA 23158509 23160899 . - . ID=GSCOCT00020697001;Parent=GSCOCG00020697001;Name=Cc11_g06720 | |
| 61658 chr11 manual_curation polypeptide 23158509 23160899 . - . ID=GSCOCP00020697001;Dbxref=InterPro:IPR000374,PFAM:PF01148,SwissProt:Q2N2K0,SwissProt:Q5N9J9,SwissProt:Q67ZM7,TAIR:AT5G04490.1,TAIR:AT5G58560.1,TrEMBL:B9GGQ8,TrEMBL:B9RSC8,TrEMBL:D7SJU1;Derives_from=GSCOCT00020697001;Name=Cc11_g06720;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Probable phytol kinase 2%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:Os01g0832000,CC_gene:At5g58560;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020697001~ Probable phytol kinase 2%2C chloroplastic~ Os01g0832000~ fragment;original_location=complement(join(3433667..3433689%2C3433422..3433556%2C3432116..3432125%2C3431832..3431922%2C3431499..3431613%2C3431299..3431422));owner=coffea | |
| 61659 chr11 manual_curation exon 23158509 23158632 . - . Parent=GSCOCT00020697001 | |
| 61660 chr11 manual_curation exon 23158709 23158823 . - . Parent=GSCOCT00020697001 | |
| 61661 chr11 manual_curation exon 23159042 23159132 . - . Parent=GSCOCT00020697001 | |
| 61662 chr11 manual_curation exon 23159326 23159335 . - . Parent=GSCOCT00020697001 | |
| 61663 chr11 manual_curation exon 23160632 23160766 . - . Parent=GSCOCT00020697001 | |
| 61664 chr11 manual_curation exon 23160877 23160899 . - . Parent=GSCOCT00020697001 | |
| 61665 chr11 manual_curation CDS 23158509 23158632 . - 2 Parent=GSCOCT00020697001 | |
| 61666 chr11 manual_curation CDS 23158709 23158823 . - 1 Parent=GSCOCT00020697001 | |
| 61667 chr11 manual_curation CDS 23159042 23159132 . - 0 Parent=GSCOCT00020697001 | |
| 61668 chr11 manual_curation CDS 23159326 23159335 . - 2 Parent=GSCOCT00020697001 | |
| 61669 chr11 manual_curation CDS 23160632 23160766 . - 2 Parent=GSCOCT00020697001 | |
| 61670 chr11 manual_curation CDS 23160877 23160899 . - 0 Parent=GSCOCT00020697001 | |
| 61671 chr11 manual_curation gene 23165913 23168756 . - . ID=GSCOCG00020698001;Name=Cc11_g06730 | |
| 61672 chr11 manual_curation mRNA 23165913 23168756 . - . ID=GSCOCT00020698001;Parent=GSCOCG00020698001;Name=Cc11_g06730 | |
| 61673 chr11 manual_curation polypeptide 23165913 23168756 . - . ID=GSCOCP00020698001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SMART:SM00369,SwissProt:C0LGE4,SwissProt:Q42371,SwissProt:Q9FII5,TAIR:AT2G34930.1,TAIR:AT3G28890.1,TAIR:AT4G13880.1,TrEMBL:F6HD34,TrEMBL:I1MPG2,TrEMBL:Q2QU42;Derives_from=GSCOCT00020698001;Name=Cc11_g06730;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:3.1.3.16,PRODUCT:Putative LRR receptor-like serine/threonine-protein kinase ERECTA,CC_functional_completeness:fragment,CC_gene:ERECTA,CC_gene:At1g12460,CC_gene:TDR;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020698001~ Putative LRR receptor-like serine/threonine-protein kinase ERECTA~ ERECTA~ fragment;original_location=complement(join(3440971..3441546%2C3440612..3440895%2C3439437..3439792%2C3438703..3439328));owner=coffea | |
| 61674 chr11 manual_curation exon 23165913 23166538 . - . Parent=GSCOCT00020698001 | |
| 61675 chr11 manual_curation exon 23166647 23167002 . - . Parent=GSCOCT00020698001 | |
| 61676 chr11 manual_curation exon 23167822 23168105 . - . Parent=GSCOCT00020698001 | |
| 61677 chr11 manual_curation exon 23168181 23168756 . - . Parent=GSCOCT00020698001 | |
| 61678 chr11 manual_curation CDS 23165913 23166538 . - 1 Parent=GSCOCT00020698001 | |
| 61679 chr11 manual_curation CDS 23166647 23167002 . - 2 Parent=GSCOCT00020698001 | |
| 61680 chr11 manual_curation CDS 23167822 23168105 . - 0 Parent=GSCOCT00020698001 | |
| 61681 chr11 manual_curation CDS 23168181 23168756 . - 0 Parent=GSCOCT00020698001 | |
| 61682 chr11 manual_curation gene 23189734 23190590 . + . ID=GSCOCG00020699001;Name=Cc11_g06740 | |
| 61683 chr11 manual_curation mRNA 23189734 23190590 . + . ID=GSCOCT00020699001;Parent=GSCOCG00020699001;Name=Cc11_g06740 | |
| 61684 chr11 manual_curation polypeptide 23189734 23190428 . + . ID=GSCOCP00020699001;Dbxref=InterPro:IPR006904,PFAM:PF04819,TAIR:AT3G01360.1,TrEMBL:A5C785,TrEMBL:B9MXN9,TrEMBL:F6HV33;Derives_from=GSCOCT00020699001;Name=Cc11_g06740;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Family of unknown function (DUF716) ,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020699001~ Putative Family of unknown function (DUF716) ~ unknown_gene~ fragment;original_location=join(3462524..3462882%2C3462975..3463218);owner=coffea | |
| 61685 chr11 manual_curation exon 23189734 23190092 . + . Parent=GSCOCT00020699001 | |
| 61686 chr11 manual_curation exon 23190185 23190590 . + . Parent=GSCOCT00020699001 | |
| 61687 chr11 manual_curation CDS 23189734 23190092 . + 0 Parent=GSCOCT00020699001 | |
| 61688 chr11 manual_curation CDS 23190185 23190428 . + 2 Parent=GSCOCT00020699001 | |
| 61689 chr11 manual_curation gene 23190643 23192494 . - . ID=GSCOCG00020700001;Name=Cc11_g06750 | |
| 61690 chr11 manual_curation mRNA 23190643 23192494 . - . ID=GSCOCT00020700001;Parent=GSCOCG00020700001;Name=Cc11_g06750 | |
| 61691 chr11 manual_curation polypeptide 23190775 23192494 . - . ID=GSCOCP00020700001;Dbxref=TrEMBL:A5C785,TrEMBL:F6HV33;Derives_from=GSCOCT00020700001;Name=Cc11_g06750;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020700001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(3464982..3465284%2C3464259..3464332%2C3463565..3463673));owner=coffea | |
| 61692 chr11 manual_curation exon 23190643 23190883 . - . Parent=GSCOCT00020700001 | |
| 61693 chr11 manual_curation exon 23191469 23191542 . - . Parent=GSCOCT00020700001 | |
| 61694 chr11 manual_curation exon 23192192 23192494 . - . Parent=GSCOCT00020700001 | |
| 61695 chr11 manual_curation CDS 23190775 23190883 . - 2 Parent=GSCOCT00020700001 | |
| 61696 chr11 manual_curation CDS 23191469 23191542 . - 0 Parent=GSCOCT00020700001 | |
| 61697 chr11 manual_curation CDS 23192192 23192494 . - 0 Parent=GSCOCT00020700001 | |
| 61698 chr11 manual_curation gene 23207864 23210655 . - . ID=GSCOCG00020702001;Name=Cc11_g06760 | |
| 61699 chr11 manual_curation mRNA 23207864 23210655 . - . ID=GSCOCT00020702001;Parent=GSCOCG00020702001;Name=Cc11_g06760 | |
| 61700 chr11 manual_curation polypeptide 23207864 23210655 . - . ID=GSCOCP00020702001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SMART:SM00369,SwissProt:C0LGQ5,SwissProt:Q9C9H7,SwissProt:Q9FRS6,TAIR:AT1G08590.1,TAIR:AT2G34930.1,TAIR:AT3G28890.1,TrEMBL:F6H9K2,TrEMBL:F6HD33,TrEMBL:F6I5J5;Derives_from=GSCOCT00020702001;Name=Cc11_g06760;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative Leucine-rich repeat receptor-like protein kinase PXL1,CC_functional_completeness:fragment,CC_gene:PXL1,CC_gene:RLP12,CC_gene:GSO1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020702001~ Putative Leucine-rich repeat receptor-like protein kinase PXL1~ PXL1~ fragment;original_location=complement(join(3483150..3483445%2C3482503..3482802%2C3481349..3481656%2C3481176..3481255%2C3480654..3481100));owner=coffea | |
| 61701 chr11 manual_curation exon 23207864 23208310 . - . Parent=GSCOCT00020702001 | |
| 61702 chr11 manual_curation exon 23208386 23208465 . - . Parent=GSCOCT00020702001 | |
| 61703 chr11 manual_curation exon 23208559 23208866 . - . Parent=GSCOCT00020702001 | |
| 61704 chr11 manual_curation exon 23209713 23210012 . - . Parent=GSCOCT00020702001 | |
| 61705 chr11 manual_curation exon 23210360 23210655 . - . Parent=GSCOCT00020702001 | |
| 61706 chr11 manual_curation CDS 23207864 23208310 . - 0 Parent=GSCOCT00020702001 | |
| 61707 chr11 manual_curation CDS 23208386 23208465 . - 1 Parent=GSCOCT00020702001 | |
| 61708 chr11 manual_curation CDS 23208559 23208866 . - 2 Parent=GSCOCT00020702001 | |
| 61709 chr11 manual_curation CDS 23209713 23210012 . - 2 Parent=GSCOCT00020702001 | |
| 61710 chr11 manual_curation CDS 23210360 23210655 . - 0 Parent=GSCOCT00020702001 | |
| 61711 chr11 manual_curation gene 23222039 23224882 . - . ID=GSCOCG00020703001;Name=Cc11_g06770 | |
| 61712 chr11 manual_curation mRNA 23222039 23224882 . - . ID=GSCOCT00020703001;Parent=GSCOCG00020703001;Name=Cc11_g06770 | |
| 61713 chr11 manual_curation polypeptide 23222039 23224882 . - . ID=GSCOCP00020703001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SMART:SM00369,SwissProt:C0LGQ5,SwissProt:Q9C9H7,SwissProt:Q9FL28,TAIR:AT2G34930.1,TAIR:AT3G05650.1,TAIR:AT3G11010.1,TrEMBL:B9HW18,TrEMBL:F6H3Z2,TrEMBL:F6I5J4;Derives_from=GSCOCT00020703001;Name=Cc11_g06770;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:3.1.3.16,PRODUCT:Putative Receptor-like protein 12,CC_functional_completeness:modules,CC_gene:RLP12,CC_gene:FLS2,CC_gene:GSO1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020703001~ Putative Receptor-like protein 12~ RLP12~ modules;original_location=complement(3494829..3497672);owner=coffea | |
| 61714 chr11 manual_curation exon 23222039 23224882 . - . Parent=GSCOCT00020703001 | |
| 61715 chr11 manual_curation CDS 23222039 23224882 . - 0 Parent=GSCOCT00020703001 | |
| 61716 chr11 manual_curation gene 23229448 23231613 . - . ID=GSCOCG00020704001;Name=Cc11_g06780 | |
| 61717 chr11 manual_curation mRNA 23229448 23231613 . - . ID=GSCOCT00020704001;Parent=GSCOCG00020704001;Name=Cc11_g06780 | |
| 61718 chr11 manual_curation polypeptide 23229448 23231613 . - . ID=GSCOCP00020704001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SMART:SM00369,SwissProt:Q8VZG8,SwissProt:Q9FL28,SwissProt:Q9LP24,TAIR:AT2G15080.1,TAIR:AT3G11080.1,TAIR:AT3G28890.1,TrEMBL:F6HG83,TrEMBL:G7KE32,TrEMBL:I1MPG2;Derives_from=GSCOCT00020704001;Name=Cc11_g06780;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At4g08850,CC_functional_completeness:complete,CC_gene:At4g08850,CC_gene:At1g35710,CC_gene:FLS2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020704001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At4g08850~ At4g08850~ complete;original_location=complement(join(3504099..3504403%2C3503862..3504008%2C3503284..3503444%2C3502501..3502791%2C3502238..3502425));owner=coffea | |
| 61719 chr11 manual_curation exon 23229448 23229635 . - . Parent=GSCOCT00020704001 | |
| 61720 chr11 manual_curation exon 23229711 23230001 . - . Parent=GSCOCT00020704001 | |
| 61721 chr11 manual_curation exon 23230494 23230654 . - . Parent=GSCOCT00020704001 | |
| 61722 chr11 manual_curation exon 23231072 23231218 . - . Parent=GSCOCT00020704001 | |
| 61723 chr11 manual_curation exon 23231309 23231613 . - . Parent=GSCOCT00020704001 | |
| 61724 chr11 manual_curation CDS 23229448 23229635 . - 1 Parent=GSCOCT00020704001 | |
| 61725 chr11 manual_curation CDS 23229711 23230001 . - 1 Parent=GSCOCT00020704001 | |
| 61726 chr11 manual_curation CDS 23230494 23230654 . - 2 Parent=GSCOCT00020704001 | |
| 61727 chr11 manual_curation CDS 23231072 23231218 . - 2 Parent=GSCOCT00020704001 | |
| 61728 chr11 manual_curation CDS 23231309 23231613 . - 0 Parent=GSCOCT00020704001 | |
| 61729 chr11 manual_curation gene 23232344 23232829 . + . ID=GSCOCG00020705001;Name=Cc11_g06790 | |
| 61730 chr11 manual_curation mRNA 23232344 23232829 . + . ID=GSCOCT00020705001;Parent=GSCOCG00020705001;Name=Cc11_g06790 | |
| 61731 chr11 manual_curation polypeptide 23232344 23232829 . + . ID=GSCOCP00020705001;Dbxref=InterPro:IPR005123,PFAM:PF03171,SwissProt:D4N502,SwissProt:Q39112,SwissProt:Q84MB3,TAIR:AT1G55290.1,TAIR:AT3G13610.1,TAIR:AT5G12270.1,TrEMBL:D7L1G0,TrEMBL:D7L3X4,TrEMBL:Q9C899;Derives_from=GSCOCT00020705001;Name=Cc11_g06790;Ontology_term=CC_evidence_code:ISS,GO:0016491,CC_EC_number:1.14.11.9,PRODUCT:Putative 1-aminocyclopropane-1-carboxylate oxidase homolog 1,CC_functional_completeness:fragment,CC_gene:At1g06620,CC_gene:CODM,CC_gene:20ox3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020705001~ Putative 1-aminocyclopropane-1-carboxylate oxidase homolog 1~ At1g06620~ fragment;original_location=3505134..3505619;owner=coffea | |
| 61732 chr11 manual_curation exon 23232344 23232829 . + . Parent=GSCOCT00020705001 | |
| 61733 chr11 manual_curation CDS 23232344 23232829 . + 0 Parent=GSCOCT00020705001 | |
| 61734 chr11 manual_curation gene 23235405 23237449 . - . ID=GSCOCG00020707001;Name=Cc11_g06800 | |
| 61735 chr11 manual_curation mRNA 23235405 23237449 . - . ID=GSCOCT00020707001;Parent=GSCOCG00020707001;Name=Cc11_g06800 | |
| 61736 chr11 manual_curation polypeptide 23235405 23237449 . - . ID=GSCOCP00020707001;Dbxref=InterPro:IPR000109,PFAM:PF00854,SwissProt:O80436,SwissProt:P46032,SwissProt:Q9LFB8,TAIR:AT2G02040.1,TAIR:AT2G38100.1,TAIR:AT5G01180.1,TrEMBL:B8LQ03,TrEMBL:D7LKT1,TrEMBL:I1KKB4;Derives_from=GSCOCT00020707001;Name=Cc11_g06800;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006857,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized protein (Fragment),CC_functional_completeness:modules,CC_gene:At2g38100,CC_gene:PTR2,CC_gene:PTR5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020707001~ Putative Uncharacterized protein (Fragment)~ At2g38100~ modules;original_location=complement(join(3509770..3510239%2C3508195..3509176));owner=coffea | |
| 61737 chr11 manual_curation exon 23235405 23236386 . - . Parent=GSCOCT00020707001 | |
| 61738 chr11 manual_curation exon 23236980 23237449 . - . Parent=GSCOCT00020707001 | |
| 61739 chr11 manual_curation CDS 23235405 23236386 . - 2 Parent=GSCOCT00020707001 | |
| 61740 chr11 manual_curation CDS 23236980 23237449 . - 0 Parent=GSCOCT00020707001 | |
| 61741 chr11 manual_curation gene 23237620 23238251 . - . ID=GSCOCG00020708001;Name=Cc11_g06810 | |
| 61742 chr11 manual_curation mRNA 23237620 23238251 . - . ID=GSCOCT00020708001;Parent=GSCOCG00020708001;Name=Cc11_g06810 | |
| 61743 chr11 manual_curation polypeptide 23237620 23238251 . - . ID=GSCOCP00020708001;Derives_from=GSCOCT00020708001;Name=Cc11_g06810;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020708001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(3510986..3511041%2C3510410..3510530));owner=coffea | |
| 61744 chr11 manual_curation exon 23237620 23237740 . - . Parent=GSCOCT00020708001 | |
| 61745 chr11 manual_curation exon 23238196 23238251 . - . Parent=GSCOCT00020708001 | |
| 61746 chr11 manual_curation CDS 23237620 23237740 . - 2 Parent=GSCOCT00020708001 | |
| 61747 chr11 manual_curation CDS 23238196 23238251 . - 0 Parent=GSCOCT00020708001 | |
| 61748 chr11 manual_curation gene 23267927 23274407 . - . ID=GSCOCG00020710001;Name=Cc11_g06820 | |
| 61749 chr11 manual_curation mRNA 23267927 23274407 . - . ID=GSCOCT00020710001;Parent=GSCOCG00020710001;Name=Cc11_g06820 | |
| 61750 chr11 manual_curation polypeptide 23267927 23274407 . - . ID=GSCOCP00020710001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SMART:SM00369,SwissProt:C0LGQ5,SwissProt:Q9FIZ3,SwissProt:Q9LYN8,TAIR:AT2G34930.1,TAIR:AT4G20140.1,TAIR:AT5G44700.1,TrEMBL:B9GFB5,TrEMBL:B9HW18,TrEMBL:G8A217;Derives_from=GSCOCT00020710001;Name=Cc11_g06820;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:3.1.3.16,PRODUCT:Putative LRR receptor-like serine/threonine-protein kinase GSO1,CC_functional_completeness:complete,CC_gene:GSO1,CC_gene:GSO2,CC_gene:EXS;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020710001~ Putative LRR receptor-like serine/threonine-protein kinase GSO1~ GSO1~ complete;original_location=complement(join(3546369..3547197%2C3545562..3546311%2C3544936..3545339%2C3544590..3544759%2C3542409..3542592%2C3540717..3541856));owner=coffea | |
| 61751 chr11 manual_curation exon 23267927 23269066 . - . Parent=GSCOCT00020710001 | |
| 61752 chr11 manual_curation exon 23269619 23269802 . - . Parent=GSCOCT00020710001 | |
| 61753 chr11 manual_curation exon 23271800 23271969 . - . Parent=GSCOCT00020710001 | |
| 61754 chr11 manual_curation exon 23272146 23272549 . - . Parent=GSCOCT00020710001 | |
| 61755 chr11 manual_curation exon 23272772 23273521 . - . Parent=GSCOCT00020710001 | |
| 61756 chr11 manual_curation exon 23273579 23274407 . - . Parent=GSCOCT00020710001 | |
| 61757 chr11 manual_curation CDS 23267927 23269066 . - 0 Parent=GSCOCT00020710001 | |
| 61758 chr11 manual_curation CDS 23269619 23269802 . - 2 Parent=GSCOCT00020710001 | |
| 61759 chr11 manual_curation CDS 23271800 23271969 . - 0 Parent=GSCOCT00020710001 | |
| 61760 chr11 manual_curation CDS 23272146 23272549 . - 1 Parent=GSCOCT00020710001 | |
| 61761 chr11 manual_curation CDS 23272772 23273521 . - 1 Parent=GSCOCT00020710001 | |
| 61762 chr11 manual_curation CDS 23273579 23274407 . - 0 Parent=GSCOCT00020710001 | |
| 61763 chr11 manual_curation gene 23281635 23285729 . - . ID=GSCOCG00020711001;Name=Cc11_g06830 | |
| 61764 chr11 manual_curation mRNA 23281635 23285729 . - . ID=GSCOCT00020711001;Parent=GSCOCG00020711001;Name=Cc11_g06830 | |
| 61765 chr11 manual_curation polypeptide 23282748 23285729 . - . ID=GSCOCP00020711001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SMART:SM00369,SwissProt:Q9FII5,SwissProt:Q9FRS6,SwissProt:Q9ZUI0,TAIR:AT3G05650.1,TAIR:AT5G23400.1,TAIR:AT5G61480.1,TrEMBL:A5CAS8,TrEMBL:F6HD34,TrEMBL:I1MPG2;Derives_from=GSCOCT00020711001;Name=Cc11_g06830;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative Leucine-rich repeat receptor-like protein kinase TDR,CC_functional_completeness:complete,CC_gene:TDR,CC_gene:At2g24130,CC_gene:PXL1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020711001~ Putative Leucine-rich repeat receptor-like protein kinase TDR~ TDR~ complete;original_location=complement(join(3558008..3558519%2C3557202..3557595%2C3557123..3557146%2C3556926..3557025%2C3555538..3556223));owner=coffea | |
| 61766 chr11 manual_curation exon 23281635 23283433 . - . Parent=GSCOCT00020711001 | |
| 61767 chr11 manual_curation exon 23284136 23284235 . - . Parent=GSCOCT00020711001 | |
| 61768 chr11 manual_curation exon 23284333 23284356 . - . Parent=GSCOCT00020711001 | |
| 61769 chr11 manual_curation exon 23284412 23284805 . - . Parent=GSCOCT00020711001 | |
| 61770 chr11 manual_curation exon 23285218 23285729 . - . Parent=GSCOCT00020711001 | |
| 61771 chr11 manual_curation CDS 23282748 23283433 . - 1 Parent=GSCOCT00020711001 | |
| 61772 chr11 manual_curation CDS 23284136 23284235 . - 0 Parent=GSCOCT00020711001 | |
| 61773 chr11 manual_curation CDS 23284333 23284356 . - 0 Parent=GSCOCT00020711001 | |
| 61774 chr11 manual_curation CDS 23284412 23284805 . - 2 Parent=GSCOCT00020711001 | |
| 61775 chr11 manual_curation CDS 23285218 23285729 . - 0 Parent=GSCOCT00020711001 | |
| 61776 chr11 manual_curation gene 23303897 23304505 . + . ID=GSCOCG00020713001;Name=Cc11_g06840 | |
| 61777 chr11 manual_curation mRNA 23303897 23304505 . + . ID=GSCOCT00020713001;Parent=GSCOCG00020713001;Name=Cc11_g06840 | |
| 61778 chr11 manual_curation polypeptide 23303897 23304505 . + . ID=GSCOCP00020713001;Dbxref=InterPro:IPR006904,PFAM:PF04819,TAIR:AT3G01360.1,TrEMBL:A5C785,TrEMBL:B9MXN9,TrEMBL:F6HV33;Derives_from=GSCOCT00020713001;Name=Cc11_g06840;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Family of unknown function (DUF716) ,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020713001~ Putative Family of unknown function (DUF716) ~ unknown_gene~ fragment;original_location=3576687..3577295;owner=coffea | |
| 61779 chr11 manual_curation exon 23303897 23304505 . + . Parent=GSCOCT00020713001 | |
| 61780 chr11 manual_curation CDS 23303897 23304505 . + 0 Parent=GSCOCT00020713001 | |
| 61781 chr11 manual_curation gene 23306091 23320671 . - . ID=GSCOCG00020715001;Name=Cc11_g06850 | |
| 61782 chr11 manual_curation mRNA 23306091 23320671 . - . ID=GSCOCT00020715001;Parent=GSCOCG00020715001;Name=Cc11_g06850 | |
| 61783 chr11 manual_curation polypeptide 23306091 23320671 . - . ID=GSCOCP00020715001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SMART:SM00369,SwissProt:Q9C9H7,SwissProt:Q9LP24,SwissProt:Q9SHI2,TAIR:AT1G71390.1,TAIR:AT1G71400.1,TAIR:AT4G04220.1,TrEMBL:F6H6P5,TrEMBL:I1MPN7,TrEMBL:I1MPP8;Derives_from=GSCOCT00020715001;Name=Cc11_g06850;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:3.1.3.16,PRODUCT:Putative Receptor-like protein 12,CC_functional_completeness:complete,CC_gene:RLP12,CC_gene:At1g17230,CC_gene:At1g35710;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020715001~ Putative Receptor-like protein 12~ RLP12~ complete;original_location=complement(join(3592788..3593461%2C3592566..3592619%2C3592199..3592475%2C3591268..3591970%2C3584172..3584331%2C3581394..3581486%2C3579365..3579513%2C3578881..3579236));owner=coffea | |
| 61784 chr11 manual_curation exon 23306091 23306446 . - . Parent=GSCOCT00020715001 | |
| 61785 chr11 manual_curation exon 23306575 23306723 . - . Parent=GSCOCT00020715001 | |
| 61786 chr11 manual_curation exon 23308604 23308696 . - . Parent=GSCOCT00020715001 | |
| 61787 chr11 manual_curation exon 23311382 23311541 . - . Parent=GSCOCT00020715001 | |
| 61788 chr11 manual_curation exon 23318478 23319180 . - . Parent=GSCOCT00020715001 | |
| 61789 chr11 manual_curation exon 23319409 23319685 . - . Parent=GSCOCT00020715001 | |
| 61790 chr11 manual_curation exon 23319776 23319829 . - . Parent=GSCOCT00020715001 | |
| 61791 chr11 manual_curation exon 23319998 23320671 . - . Parent=GSCOCT00020715001 | |
| 61792 chr11 manual_curation CDS 23306091 23306446 . - 1 Parent=GSCOCT00020715001 | |
| 61793 chr11 manual_curation CDS 23306575 23306723 . - 2 Parent=GSCOCT00020715001 | |
| 61794 chr11 manual_curation CDS 23308604 23308696 . - 2 Parent=GSCOCT00020715001 | |
| 61795 chr11 manual_curation CDS 23311382 23311541 . - 1 Parent=GSCOCT00020715001 | |
| 61796 chr11 manual_curation CDS 23318478 23319180 . - 0 Parent=GSCOCT00020715001 | |
| 61797 chr11 manual_curation CDS 23319409 23319685 . - 2 Parent=GSCOCT00020715001 | |
| 61798 chr11 manual_curation CDS 23319776 23319829 . - 2 Parent=GSCOCT00020715001 | |
| 61799 chr11 manual_curation CDS 23319998 23320671 . - 0 Parent=GSCOCT00020715001 | |
| 61800 chr11 manual_curation gene 23341507 23344099 . + . ID=GSCOCG00020717001;Name=Cc11_g06860 | |
| 61801 chr11 manual_curation mRNA 23341507 23344099 . + . ID=GSCOCT00020717001;Parent=GSCOCG00020717001;Name=Cc11_g06860 | |
| 61802 chr11 manual_curation polypeptide 23341507 23343090 . + . ID=GSCOCP00020717001;Dbxref=InterPro:IPR005123,PFAM:PF03171,SwissProt:P10967,SwissProt:Q84MB3,SwissProt:Q9LTH8,TAIR:AT1G55290.1,TAIR:AT3G13610.1,TAIR:AT5G12270.1,TrEMBL:B9GLG4,TrEMBL:F6GUJ9,TrEMBL:F6GUK0;Derives_from=GSCOCT00020717001;Name=Cc11_g06860;Ontology_term=CC_evidence_code:ISS,GO:0016491,CC_EC_number:1.14.11.9,PRODUCT:Putative 1-aminocyclopropane-1-carboxylate oxidase homolog 1,CC_functional_completeness:complete,CC_gene:At1g06620,CC_gene:At5g59530,CC_gene:ACO3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020717001~ Putative 1-aminocyclopropane-1-carboxylate oxidase homolog 1~ At1g06620~ complete;original_location=join(3614297..3614793%2C3615307..3615880);owner=coffea | |
| 61803 chr11 manual_curation exon 23341507 23342003 . + . Parent=GSCOCT00020717001 | |
| 61804 chr11 manual_curation exon 23342517 23344099 . + . Parent=GSCOCT00020717001 | |
| 61805 chr11 manual_curation CDS 23341507 23342003 . + 0 Parent=GSCOCT00020717001 | |
| 61806 chr11 manual_curation CDS 23342517 23343090 . + 2 Parent=GSCOCT00020717001 | |
| 61807 chr11 manual_curation gene 23345626 23347670 . - . ID=GSCOCG00020719001;Name=Cc11_g06870 | |
| 61808 chr11 manual_curation mRNA 23345626 23347670 . - . ID=GSCOCT00020719001;Parent=GSCOCG00020719001;Name=Cc11_g06870 | |
| 61809 chr11 manual_curation polypeptide 23345626 23347670 . - . ID=GSCOCP00020719001;Dbxref=InterPro:IPR000109,PFAM:PF00854,SwissProt:O80436,SwissProt:P46032,SwissProt:Q9LFB8,TAIR:AT2G02040.1,TAIR:AT2G38100.1,TAIR:AT5G01180.1,TrEMBL:B8LQ03,TrEMBL:D7LKT1,TrEMBL:I1KKB4;Derives_from=GSCOCT00020719001;Name=Cc11_g06870;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006857,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized protein (Fragment),CC_functional_completeness:modules,CC_gene:At2g38100,CC_gene:PTR5,CC_gene:PTR2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020719001~ Putative Uncharacterized protein (Fragment)~ At2g38100~ modules;original_location=complement(join(3619991..3620460%2C3618416..3619397));owner=coffea | |
| 61810 chr11 manual_curation exon 23345626 23346607 . - . Parent=GSCOCT00020719001 | |
| 61811 chr11 manual_curation exon 23347201 23347670 . - . Parent=GSCOCT00020719001 | |
| 61812 chr11 manual_curation CDS 23345626 23346607 . - 2 Parent=GSCOCT00020719001 | |
| 61813 chr11 manual_curation CDS 23347201 23347670 . - 0 Parent=GSCOCT00020719001 | |
| 61814 chr11 manual_curation gene 23351581 23355024 . - . ID=GSCOCG00020720001;Name=Cc11_g06880 | |
| 61815 chr11 manual_curation mRNA 23351581 23355024 . - . ID=GSCOCT00020720001;Parent=GSCOCG00020720001;Name=Cc11_g06880 | |
| 61816 chr11 manual_curation polypeptide 23351797 23354765 . - . ID=GSCOCP00020720001;Dbxref=InterPro:IPR000109,PFAM:PF00854,SwissProt:O80436,SwissProt:P46032,SwissProt:Q9LFB8,TAIR:AT2G02040.1,TAIR:AT2G38100.1,TAIR:AT5G01180.1,TrEMBL:D7LKT1,TrEMBL:D8QV70,TrEMBL:I1KKB4;Derives_from=GSCOCT00020720001;Name=Cc11_g06880;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006857,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative peptide/nitrate transporter At2g38100,CC_functional_completeness:modules,CC_gene:At2g38100,CC_gene:PTR5,CC_gene:PTR2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020720001~ Putative peptide/nitrate transporter At2g38100~ At2g38100~ modules;original_location=complement(join(3627534..3627555%2C3627184..3627398%2C3625988..3626778%2C3624587..3625490));owner=coffea | |
| 61817 chr11 manual_curation exon 23354913 23355024 . - . Parent=GSCOCT00020720001 | |
| 61818 chr11 manual_curation exon 23351581 23352700 . - . Parent=GSCOCT00020720001 | |
| 61819 chr11 manual_curation exon 23353198 23353988 . - . Parent=GSCOCT00020720001 | |
| 61820 chr11 manual_curation exon 23354394 23354608 . - . Parent=GSCOCT00020720001 | |
| 61821 chr11 manual_curation exon 23354744 23354800 . - . Parent=GSCOCT00020720001 | |
| 61822 chr11 manual_curation CDS 23351797 23352700 . - 2 Parent=GSCOCT00020720001 | |
| 61823 chr11 manual_curation CDS 23353198 23353988 . - 0 Parent=GSCOCT00020720001 | |
| 61824 chr11 manual_curation CDS 23354394 23354608 . - 1 Parent=GSCOCT00020720001 | |
| 61825 chr11 manual_curation CDS 23354744 23354765 . - 0 Parent=GSCOCT00020720001 | |
| 61826 chr11 manual_curation gene 23371052 23374280 . - . ID=GSCOCG00020722001;Name=Cc11_g06890 | |
| 61827 chr11 manual_curation mRNA 23371052 23374280 . - . ID=GSCOCT00020722001;Parent=GSCOCG00020722001;Name=Cc11_g06890 | |
| 61828 chr11 manual_curation polypeptide 23371052 23373864 . - . ID=GSCOCP00020722001;Dbxref=InterPro:IPR000109,PFAM:PF00854,SwissProt:O80436,SwissProt:Q0WP01,SwissProt:Q9C7U1,TAIR:AT1G22540.1,TAIR:AT1G72140.1,TAIR:AT2G38100.1,TrEMBL:C5XR95,TrEMBL:D7LKT1,TrEMBL:I1KKB4;Derives_from=GSCOCT00020722001;Name=Cc11_g06890;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006857,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative peptide/nitrate transporter At2g38100,CC_functional_completeness:modules,CC_gene:At2g38100,CC_gene:At1g72140,CC_gene:At1g22540;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020722001~ Putative peptide/nitrate transporter At2g38100~ At2g38100~ modules;original_location=complement(join(3646633..3646654%2C3646300..3646514%2C3645501..3646144%2C3643842..3644721));owner=coffea | |
| 61829 chr11 manual_curation exon 23374011 23374280 . - . Parent=GSCOCT00020722001 | |
| 61830 chr11 manual_curation exon 23371052 23371931 . - . Parent=GSCOCT00020722001 | |
| 61831 chr11 manual_curation exon 23372711 23373354 . - . Parent=GSCOCT00020722001 | |
| 61832 chr11 manual_curation exon 23373510 23373724 . - . Parent=GSCOCT00020722001 | |
| 61833 chr11 manual_curation exon 23373843 23373897 . - . Parent=GSCOCT00020722001 | |
| 61834 chr11 manual_curation CDS 23371052 23371931 . - 2 Parent=GSCOCT00020722001 | |
| 61835 chr11 manual_curation CDS 23372711 23373354 . - 0 Parent=GSCOCT00020722001 | |
| 61836 chr11 manual_curation CDS 23373510 23373724 . - 1 Parent=GSCOCT00020722001 | |
| 61837 chr11 manual_curation CDS 23373843 23373864 . - 0 Parent=GSCOCT00020722001 | |
| 61838 chr11 manual_curation gene 23376695 23377668 . + . ID=GSCOCG00020723001;Name=Cc11_g06900 | |
| 61839 chr11 manual_curation mRNA 23376695 23377668 . + . ID=GSCOCT00020723001;Parent=GSCOCG00020723001;Name=Cc11_g06900 | |
| 61840 chr11 manual_curation polypeptide 23376767 23377393 . + . ID=GSCOCP00020723001;Dbxref=InterPro:IPR003397,PFAM:PF02466,SwissProt:O60830,SwissProt:Q9SP35,SwissProt:Q9VNA0,TAIR:AT1G20350.1,TAIR:AT2G37410.1,TAIR:AT5G11690.1,TrEMBL:I1J4I7,TrEMBL:I1MM17,TrEMBL:I1ND97;Derives_from=GSCOCT00020723001;Name=Cc11_g06900;Ontology_term=CC_evidence_code:ISS,GO:0005743,GO:0008565,GO:0015031,CC_EC_number:missing_EC_number,PRODUCT:Mitochondrial import inner membrane translocase subunit Tim17,CC_functional_completeness:complete,CC_gene:TIM17,CC_gene:Tim17b1,CC_gene:TIMM17B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020723001~ Mitochondrial import inner membrane translocase subunit Tim17~ TIM17~ complete;original_location=3649557..3650183;owner=coffea | |
| 61841 chr11 manual_curation exon 23376695 23377668 . + . Parent=GSCOCT00020723001 | |
| 61842 chr11 manual_curation CDS 23376767 23377393 . + 0 Parent=GSCOCT00020723001 | |
| 61843 chr11 manual_curation gene 23379883 23387821 . - . ID=GSCOCG00020724001;Name=Cc11_g06910 | |
| 61844 chr11 manual_curation mRNA 23379883 23387821 . - . ID=GSCOCT00020724001;Parent=GSCOCG00020724001;Name=Cc11_g06910 | |
| 61845 chr11 manual_curation polypeptide 23384558 23387821 . - . ID=GSCOCP00020724001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,InterPro:IPR021929,PFAM:PF00931,PFAM:PF12061,PRINTS:PR00364,SwissProt:Q6L3L0,SwissProt:Q6L3Z7,SwissProt:Q8W1E0,TAIR:AT1G50180.1,TAIR:AT3G46530.1,TAIR:AT3G46730.1,TrEMBL:Q6L432,TrEMBL:Q96485,TrEMBL:Q9LLD0;Derives_from=GSCOCT00020724001;Name=Cc11_g06910;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative Late blight resistance protein R1-A,CC_functional_completeness:fragment,CC_gene:R1A,CC_gene:R1B-14,CC_gene:R1B-23;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020724001~ Putative Late blight resistance protein R1-A~ R1A~ fragment;original_location=complement(3657348..3660611);owner=coffea | |
| 61846 chr11 manual_curation exon 23379883 23380248 . - . Parent=GSCOCT00020724001 | |
| 61847 chr11 manual_curation exon 23381471 23381708 . - . Parent=GSCOCT00020724001 | |
| 61848 chr11 manual_curation exon 23384054 23387821 . - . Parent=GSCOCT00020724001 | |
| 61849 chr11 manual_curation CDS 23384558 23387821 . - 0 Parent=GSCOCT00020724001 | |
| 61850 chr11 manual_curation gene 23411540 23416296 . - . ID=GSCOCG00020727001;Name=Cc11_g06920 | |
| 61851 chr11 manual_curation mRNA 23411540 23416296 . - . ID=GSCOCT00020727001;Parent=GSCOCG00020727001;Name=Cc11_g06920 | |
| 61852 chr11 manual_curation polypeptide 23412544 23416296 . - . ID=GSCOCP00020727001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,InterPro:IPR021929,PFAM:PF00931,PFAM:PF12061,PRINTS:PR00364,SwissProt:Q6L3Z7,SwissProt:Q6L403,SwissProt:Q8W1E0,TAIR:AT1G58390.1,TAIR:AT3G46530.1,TAIR:AT3G46730.1,TrEMBL:Q6L432,TrEMBL:Q96485,TrEMBL:Q9LLD4;Derives_from=GSCOCT00020727001;Name=Cc11_g06920;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative Late blight resistance protein R1-A,CC_functional_completeness:complete,CC_gene:R1A,CC_gene:R1B-17,CC_gene:R1B-14;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020727001~ Putative Late blight resistance protein R1-A~ R1A~ complete;original_location=complement(3685334..3689086);owner=coffea | |
| 61853 chr11 manual_curation exon 23411540 23416296 . - . Parent=GSCOCT00020727001 | |
| 61854 chr11 manual_curation CDS 23412544 23416296 . - 0 Parent=GSCOCT00020727001 | |
| 61855 chr11 manual_curation gene 23476686 23477435 . + . ID=GSCOCG00020729001;Name=Cc11_g06930 | |
| 61856 chr11 manual_curation mRNA 23476686 23477435 . + . ID=GSCOCT00020729001;Parent=GSCOCG00020729001;Name=Cc11_g06930 | |
| 61857 chr11 manual_curation polypeptide 23476686 23477435 . + . ID=GSCOCP00020729001;Dbxref=InterPro:IPR005299,PFAM:PF03492,SwissProt:Q8H0D2,SwissProt:Q9FKC8,SwissProt:Q9FKD0,TAIR:AT1G68040.1,TAIR:AT3G44860.1,TAIR:AT3G44870.1,TrEMBL:B9I2H2,TrEMBL:B9IE91,TrEMBL:D7T8J3;Derives_from=GSCOCT00020729001;Name=Cc11_g06930;Ontology_term=CC_evidence_code:ISS,GO:0008168,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable S-adenosylmethionine-dependent methyltransferase At5g37990,CC_functional_completeness:fragment,CC_gene:At5g37990,CC_gene:At5g37970,CC_gene:DXMT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020729001~ Putative Probable S-adenosylmethionine-dependent methyltransferase At5g37990~ At5g37990~ fragment;original_location=join(3749476..3749527%2C3749942..3750225);owner=coffea | |
| 61858 chr11 manual_curation exon 23476686 23476737 . + . Parent=GSCOCT00020729001 | |
| 61859 chr11 manual_curation exon 23477152 23477435 . + . Parent=GSCOCT00020729001 | |
| 61860 chr11 manual_curation CDS 23476686 23476737 . + 0 Parent=GSCOCT00020729001 | |
| 61861 chr11 manual_curation CDS 23477152 23477435 . + 1 Parent=GSCOCT00020729001 | |
| 61862 chr11 manual_curation gene 23487101 23496910 . - . ID=GSCOCG00020732001;Name=Cc11_g06940 | |
| 61863 chr11 manual_curation mRNA 23487101 23496910 . - . ID=GSCOCT00020732001;Parent=GSCOCG00020732001;Name=Cc11_g06940 | |
| 61864 chr11 manual_curation polypeptide 23487397 23495045 . - . ID=GSCOCP00020732001;Dbxref=InterPro:IPR007855,PANTHER:PTHR23079,PFAM:PF05183,SwissProt:O82504,SwissProt:Q0DXS3,SwissProt:Q9LQV2,TAIR:AT1G14790.1,TAIR:AT3G49500.1,TAIR:AT4G11130.1,TrEMBL:C1I213,TrEMBL:Q9ZR58,TrEMBL:Q9ZRY7;Derives_from=GSCOCT00020732001;Name=Cc11_g06940;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:RNA-dependent RNA polymerase 1,CC_functional_completeness:complete,CC_gene:RDR1,CC_gene:RDR2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020732001~ RNA-dependent RNA polymerase 1~ RDR1~ complete;original_location=complement(join(3767326..3767835%2C3764258..3766116%2C3762002..3762152%2C3760187..3761005));owner=coffea | |
| 61865 chr11 manual_curation exon 23496721 23496910 . - . Parent=GSCOCT00020732001 | |
| 61866 chr11 manual_curation exon 23487101 23488215 . - . Parent=GSCOCT00020732001 | |
| 61867 chr11 manual_curation exon 23489212 23489362 . - . Parent=GSCOCT00020732001 | |
| 61868 chr11 manual_curation exon 23491468 23493326 . - . Parent=GSCOCT00020732001 | |
| 61869 chr11 manual_curation exon 23494536 23495110 . - . Parent=GSCOCT00020732001 | |
| 61870 chr11 manual_curation CDS 23487397 23488215 . - 0 Parent=GSCOCT00020732001 | |
| 61871 chr11 manual_curation CDS 23489212 23489362 . - 2 Parent=GSCOCT00020732001 | |
| 61872 chr11 manual_curation CDS 23491468 23493326 . - 0 Parent=GSCOCT00020732001 | |
| 61873 chr11 manual_curation CDS 23494536 23495045 . - 0 Parent=GSCOCT00020732001 | |
| 61874 chr11 manual_curation gene 23504270 23517982 . - . ID=GSCOCG00020733001;Name=Cc11_g06950 | |
| 61875 chr11 manual_curation mRNA 23504270 23517982 . - . ID=GSCOCT00020733001;Parent=GSCOCG00020733001;Name=Cc11_g06950 | |
| 61876 chr11 manual_curation polypeptide 23504270 23516759 . - . ID=GSCOCP00020733001;Dbxref=InterPro:IPR007855,PANTHER:PTHR23079,PFAM:PF05183,SwissProt:O82504,SwissProt:Q0DXS3,SwissProt:Q9LQV2,TAIR:AT1G14790.1,TAIR:AT3G49500.1,TAIR:AT4G11130.1,TrEMBL:B9HJH7,TrEMBL:Q6L3W8,TrEMBL:Q9ZRY7;Derives_from=GSCOCT00020733001;Name=Cc11_g06950;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:RNA-dependent RNA polymerase 1,CC_functional_completeness:complete,CC_gene:RDR1,CC_gene:RDR2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020733001~ RNA-dependent RNA polymerase 1~ RDR1~ complete;original_location=complement(join(3789040..3789549%2C3784081..3785927%2C3783225..3783379%2C3782972..3783005%2C3781268..3781418%2C3777060..3777926));owner=coffea | |
| 61877 chr11 manual_curation exon 23517816 23517982 . - . Parent=GSCOCT00020733001 | |
| 61878 chr11 manual_curation exon 23504270 23505136 . - . Parent=GSCOCT00020733001 | |
| 61879 chr11 manual_curation exon 23508478 23508628 . - . Parent=GSCOCT00020733001 | |
| 61880 chr11 manual_curation exon 23510182 23510215 . - . Parent=GSCOCT00020733001 | |
| 61881 chr11 manual_curation exon 23510435 23510589 . - . Parent=GSCOCT00020733001 | |
| 61882 chr11 manual_curation exon 23511291 23513137 . - . Parent=GSCOCT00020733001 | |
| 61883 chr11 manual_curation exon 23516250 23516812 . - . Parent=GSCOCT00020733001 | |
| 61884 chr11 manual_curation CDS 23504270 23505136 . - 0 Parent=GSCOCT00020733001 | |
| 61885 chr11 manual_curation CDS 23508478 23508628 . - 2 Parent=GSCOCT00020733001 | |
| 61886 chr11 manual_curation CDS 23510182 23510215 . - 1 Parent=GSCOCT00020733001 | |
| 61887 chr11 manual_curation CDS 23510435 23510589 . - 2 Parent=GSCOCT00020733001 | |
| 61888 chr11 manual_curation CDS 23511291 23513137 . - 0 Parent=GSCOCT00020733001 | |
| 61889 chr11 manual_curation CDS 23516250 23516759 . - 0 Parent=GSCOCT00020733001 | |
| 61890 chr11 manual_curation gene 23538795 23546726 . - . ID=GSCOCG00020734001;Name=Cc11_g06960 | |
| 61891 chr11 manual_curation mRNA 23538795 23546726 . - . ID=GSCOCT00020734001;Parent=GSCOCG00020734001;Name=Cc11_g06960 | |
| 61892 chr11 manual_curation polypeptide 23538795 23545065 . - . ID=GSCOCP00020734001;Dbxref=InterPro:IPR007855,PANTHER:PTHR23079,PFAM:PF05183,SwissProt:O82504,SwissProt:Q0DXS3,SwissProt:Q9LQV2,TAIR:AT1G14790.1,TAIR:AT3G49500.1,TAIR:AT4G11130.1,TrEMBL:C1I213,TrEMBL:Q9ZR58,TrEMBL:Q9ZRY7;Derives_from=GSCOCT00020734001;Name=Cc11_g06960;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:RNA-dependent RNA polymerase 1,CC_functional_completeness:complete,CC_gene:RDR1,CC_gene:RDR2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020734001~ RNA-dependent RNA polymerase 1~ RDR1~ complete;original_location=complement(join(3817346..3817855%2C3813403..3815261%2C3812729..3812879%2C3811585..3812460));owner=coffea | |
| 61893 chr11 manual_curation exon 23546121 23546291 . - . Parent=GSCOCT00020734001 | |
| 61894 chr11 manual_curation exon 23546670 23546726 . - . Parent=GSCOCT00020734001 | |
| 61895 chr11 manual_curation exon 23538795 23539670 . - . Parent=GSCOCT00020734001 | |
| 61896 chr11 manual_curation exon 23539939 23540089 . - . Parent=GSCOCT00020734001 | |
| 61897 chr11 manual_curation exon 23540613 23542471 . - . Parent=GSCOCT00020734001 | |
| 61898 chr11 manual_curation exon 23544556 23545118 . - . Parent=GSCOCT00020734001 | |
| 61899 chr11 manual_curation CDS 23538795 23539670 . - 0 Parent=GSCOCT00020734001 | |
| 61900 chr11 manual_curation CDS 23539939 23540089 . - 2 Parent=GSCOCT00020734001 | |
| 61901 chr11 manual_curation CDS 23540613 23542471 . - 0 Parent=GSCOCT00020734001 | |
| 61902 chr11 manual_curation CDS 23544556 23545065 . - 0 Parent=GSCOCT00020734001 | |
| 61903 chr11 manual_curation gene 23552744 23561261 . - . ID=GSCOCG00020735001;Name=Cc11_g06970 | |
| 61904 chr11 manual_curation mRNA 23552744 23561261 . - . ID=GSCOCT00020735001;Parent=GSCOCG00020735001;Name=Cc11_g06970 | |
| 61905 chr11 manual_curation polypeptide 23552744 23560803 . - . ID=GSCOCP00020735001;Dbxref=InterPro:IPR007855,PANTHER:PTHR23079,PFAM:PF05183,SwissProt:O82504,SwissProt:Q0DXS3,SwissProt:Q9LQV2,TAIR:AT1G14790.1,TAIR:AT3G49500.1,TAIR:AT4G11130.1,TrEMBL:C1I213,TrEMBL:Q9ZR58,TrEMBL:Q9ZRY7;Derives_from=GSCOCT00020735001;Name=Cc11_g06970;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:RNA-dependent RNA polymerase 1,CC_functional_completeness:complete,CC_gene:RDR1,CC_gene:RDR2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020735001~ RNA-dependent RNA polymerase 1~ RDR1~ complete;original_location=complement(join(3833084..3833593%2C3829607..3831468%2C3827348..3827498%2C3825534..3826352));owner=coffea | |
| 61906 chr11 manual_curation exon 23552744 23553562 . - . Parent=GSCOCT00020735001 | |
| 61907 chr11 manual_curation exon 23554558 23554708 . - . Parent=GSCOCT00020735001 | |
| 61908 chr11 manual_curation exon 23556817 23558678 . - . Parent=GSCOCT00020735001 | |
| 61909 chr11 manual_curation exon 23560294 23561261 . - . Parent=GSCOCT00020735001 | |
| 61910 chr11 manual_curation CDS 23552744 23553562 . - 0 Parent=GSCOCT00020735001 | |
| 61911 chr11 manual_curation CDS 23554558 23554708 . - 2 Parent=GSCOCT00020735001 | |
| 61912 chr11 manual_curation CDS 23556817 23558678 . - 0 Parent=GSCOCT00020735001 | |
| 61913 chr11 manual_curation CDS 23560294 23560803 . - 0 Parent=GSCOCT00020735001 | |
| 61914 chr11 manual_curation gene 23566867 23570606 . - . ID=GSCOCG00020736001;Name=Cc11_g06980 | |
| 61915 chr11 manual_curation mRNA 23566867 23570606 . - . ID=GSCOCT00020736001;Parent=GSCOCG00020736001;Name=Cc11_g06980 | |
| 61916 chr11 manual_curation polypeptide 23567474 23569914 . - . ID=GSCOCP00020736001;Dbxref=InterPro:IPR012280,PFAM:PF02774,SwissProt:O67716,SwissProt:P49420,SwissProt:Q55512,TAIR:AT1G14810.1,TrEMBL:B9HJH4,TrEMBL:B9T4M3,TrEMBL:F6HFC9;Derives_from=GSCOCT00020736001;Name=Cc11_g06980;Ontology_term=CC_evidence_code:ISS,GO:0005737,GO:0008652,GO:0046983,CC_EC_number:1.2.1.11,PRODUCT:Aspartate-semialdehyde dehydrogenase,CC_functional_completeness:fragment,CC_gene:asd;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00020736001~ Aspartate-semialdehyde dehydrogenase~ asd~ fragment;original_location=complement(join(3842684..3842704%2C3841460..3841546%2C3841341..3841385%2C3841154..3841249%2C3840908..3841009%2C3840424..3840578%2C3840264..3840348));owner=coffea | |
| 61917 chr11 manual_curation exon 23566867 23567558 . - . Parent=GSCOCT00020736001 | |
| 61918 chr11 manual_curation exon 23567634 23567788 . - . Parent=GSCOCT00020736001 | |
| 61919 chr11 manual_curation exon 23568118 23568219 . - . Parent=GSCOCT00020736001 | |
| 61920 chr11 manual_curation exon 23568364 23568459 . - . Parent=GSCOCT00020736001 | |
| 61921 chr11 manual_curation exon 23568551 23568595 . - . Parent=GSCOCT00020736001 | |
| 61922 chr11 manual_curation exon 23568670 23568756 . - . Parent=GSCOCT00020736001 | |
| 61923 chr11 manual_curation exon 23569894 23570606 . - . Parent=GSCOCT00020736001 | |
| 61924 chr11 manual_curation CDS 23567474 23567558 . - 2 Parent=GSCOCT00020736001 | |
| 61925 chr11 manual_curation CDS 23567634 23567788 . - 0 Parent=GSCOCT00020736001 | |
| 61926 chr11 manual_curation CDS 23568118 23568219 . - 0 Parent=GSCOCT00020736001 | |
| 61927 chr11 manual_curation CDS 23568364 23568459 . - 0 Parent=GSCOCT00020736001 | |
| 61928 chr11 manual_curation CDS 23568551 23568595 . - 0 Parent=GSCOCT00020736001 | |
| 61929 chr11 manual_curation CDS 23568670 23568756 . - 0 Parent=GSCOCT00020736001 | |
| 61930 chr11 manual_curation CDS 23569894 23569914 . - 0 Parent=GSCOCT00020736001 | |
| 61931 chr11 manual_curation gene 23599313 23602840 . - . ID=GSCOCG00018120001;Name=Cc11_g06990 | |
| 61932 chr11 manual_curation mRNA 23599313 23602840 . - . ID=GSCOCT00018120001;Parent=GSCOCG00018120001;Name=Cc11_g06990 | |
| 61933 chr11 manual_curation polypeptide 23599804 23602840 . - . ID=GSCOCP00018120001;Dbxref=InterPro:IPR002902,PFAM:PF01657,SwissProt:Q0WPN8,SwissProt:Q8GUJ2,SwissProt:Q9ZU94,TAIR:AT1G70690.1,TAIR:AT2G01660.1,TAIR:AT5G37660.2,TrEMBL:B9HW29,TrEMBL:B9SJ12,TrEMBL:F6HFE4;Derives_from=GSCOCT00018120001;Name=Cc11_g06990;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Cysteine-rich repeat secretory protein 12,CC_functional_completeness:complete,CC_gene:CRRSP12,CC_gene:CRRSP60,CC_gene:CRRSP2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018120001~ Cysteine-rich repeat secretory protein 12~ CRRSP12~ complete;original_location=join(1112268..1112997%2C1115061..1115171%2C1115294..1115304);owner=coffea | |
| 61934 chr11 manual_curation exon 23602111 23602840 . - . Parent=GSCOCT00018120001 | |
| 61935 chr11 manual_curation exon 23599937 23600047 . - . Parent=GSCOCT00018120001 | |
| 61936 chr11 manual_curation exon 23599313 23599814 . - . Parent=GSCOCT00018120001 | |
| 61937 chr11 manual_curation CDS 23602111 23602840 . - 0 Parent=GSCOCT00018120001 | |
| 61938 chr11 manual_curation CDS 23599937 23600047 . - 1 Parent=GSCOCT00018120001 | |
| 61939 chr11 manual_curation CDS 23599804 23599814 . - 1 Parent=GSCOCT00018120001 | |
| 61940 chr11 manual_curation gene 23613166 23617022 . - . ID=GSCOCG00018119001;Name=Cc11_g07000 | |
| 61941 chr11 manual_curation mRNA 23613166 23617022 . - . ID=GSCOCT00018119001;Parent=GSCOCG00018119001;Name=Cc11_g07000 | |
| 61942 chr11 manual_curation polypeptide 23613373 23616574 . - . ID=GSCOCP00018119001;Dbxref=InterPro:IPR007736,PFAM:PF05042,SwissProt:B3H7A9,SwissProt:Q9CAB7,SwissProt:Q9CAB8,TAIR:AT1G23240.1,TAIR:AT1G70670.1,TAIR:AT1G70680.1,TrEMBL:B9HJF5,TrEMBL:B9HW27,TrEMBL:G8A026;Derives_from=GSCOCT00018119001;Name=Cc11_g07000;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Probable peroxygenase 4,CC_functional_completeness:complete,CC_gene:PXG4,CC_gene:PXG5,CC_gene:PXG7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018119001~ Probable peroxygenase 4~ PXG4~ complete;original_location=join(1098534..1098588%2C1098698..1098783%2C1100149..1100243%2C1101330..1101455%2C1101564..1101735);owner=coffea | |
| 61943 chr11 manual_curation exon 23616772 23617022 . - . Parent=GSCOCT00018119001 | |
| 61944 chr11 manual_curation exon 23616520 23616615 . - . Parent=GSCOCT00018119001 | |
| 61945 chr11 manual_curation exon 23616325 23616410 . - . Parent=GSCOCT00018119001 | |
| 61946 chr11 manual_curation exon 23614865 23614959 . - . Parent=GSCOCT00018119001 | |
| 61947 chr11 manual_curation exon 23613653 23613778 . - . Parent=GSCOCT00018119001 | |
| 61948 chr11 manual_curation exon 23613166 23613544 . - . Parent=GSCOCT00018119001 | |
| 61949 chr11 manual_curation CDS 23616520 23616574 . - 0 Parent=GSCOCT00018119001 | |
| 61950 chr11 manual_curation CDS 23616325 23616410 . - 1 Parent=GSCOCT00018119001 | |
| 61951 chr11 manual_curation CDS 23614865 23614959 . - 0 Parent=GSCOCT00018119001 | |
| 61952 chr11 manual_curation CDS 23613653 23613778 . - 2 Parent=GSCOCT00018119001 | |
| 61953 chr11 manual_curation CDS 23613373 23613544 . - 2 Parent=GSCOCT00018119001 | |
| 61954 chr11 manual_curation gene 23619747 23625854 . - . ID=GSCOCG00018118001;Name=Cc11_g07010 | |
| 61955 chr11 manual_curation mRNA 23619747 23625854 . - . ID=GSCOCT00018118001;Parent=GSCOCG00018118001;Name=Cc11_g07010 | |
| 61956 chr11 manual_curation polypeptide 23620023 23625641 . - . ID=GSCOCP00018118001;Dbxref=GENE3D:G3DSA:3.10.110.10,InterPro:IPR000608,InterPro:IPR016135,PFAM:PF00179,PROFILE:PS50127,SMART:SM00212,SUPERFAMILY:SSF54495,SwissProt:Q93YP0,SwissProt:Q9CAB6,SwissProt:Q9SVD7,TAIR:AT1G23260.1,TAIR:AT1G70660.1,TAIR:AT3G52560.4,TrEMBL:B9HW26,TrEMBL:G7LAI8,TrEMBL:I1L2W9;Derives_from=GSCOCT00018118001;Name=Cc11_g07010;Ontology_term=CC_evidence_code:ISS,GO:0019787,GO:0043687,GO:0051246,CC_EC_number:missing_EC_number,PRODUCT:Ubiquitin-conjugating enzyme E2 variant 1A,CC_functional_completeness:complete,CC_gene:UEV1A,CC_gene:UEV1B,CC_gene:UEV1D;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018118001~ Ubiquitin-conjugating enzyme E2 variant 1A~ UEV1A~ complete;original_location=join(1089467..1089497%2C1092279..1092418%2C1094437..1094562%2C1094648..1094774%2C1095027..1095085);owner=coffea | |
| 61957 chr11 manual_curation exon 23625611 23625854 . - . Parent=GSCOCT00018118001 | |
| 61958 chr11 manual_curation exon 23622690 23622829 . - . Parent=GSCOCT00018118001 | |
| 61959 chr11 manual_curation exon 23620546 23620671 . - . Parent=GSCOCT00018118001 | |
| 61960 chr11 manual_curation exon 23620334 23620460 . - . Parent=GSCOCT00018118001 | |
| 61961 chr11 manual_curation exon 23619747 23620081 . - . Parent=GSCOCT00018118001 | |
| 61962 chr11 manual_curation CDS 23625611 23625641 . - 0 Parent=GSCOCT00018118001 | |
| 61963 chr11 manual_curation CDS 23622690 23622829 . - 1 Parent=GSCOCT00018118001 | |
| 61964 chr11 manual_curation CDS 23620546 23620671 . - 0 Parent=GSCOCT00018118001 | |
| 61965 chr11 manual_curation CDS 23620334 23620460 . - 0 Parent=GSCOCT00018118001 | |
| 61966 chr11 manual_curation CDS 23620023 23620081 . - 1 Parent=GSCOCT00018118001 | |
| 61967 chr11 manual_curation gene 23630552 23634530 . + . ID=GSCOCG00018117001;Name=Cc11_g07020 | |
| 61968 chr11 manual_curation mRNA 23630552 23634530 . + . ID=GSCOCT00018117001;Parent=GSCOCG00018117001;Name=Cc11_g07020 | |
| 61969 chr11 manual_curation polypeptide 23631414 23634308 . + . ID=GSCOCP00018117001;Dbxref=InterPro:IPR005123,PFAM:PF03171,SwissProt:P93824,SwissProt:Q9LTH7,SwissProt:Q9LTH8,TAIR:AT1G04350.1,TAIR:AT5G59530.1,TAIR:AT5G59540.1,TrEMBL:A9PJM3,TrEMBL:B9HW24,TrEMBL:B9SJ20;Derives_from=GSCOCT00018117001;Name=Cc11_g07020;Ontology_term=CC_evidence_code:ISS,GO:0016491,CC_EC_number:1.14.11.9,PRODUCT:1-aminocyclopropane-1-carboxylate oxidase homolog 11,CC_functional_completeness:fragment,CC_gene:At5g59530,CC_gene:At5g59540,CC_gene:At1g04350;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018117001~ 1-aminocyclopropane-1-carboxylate oxidase homolog 11~ At5g59530~ fragment;original_location=complement(join(1083500..1083694%2C1080800..1081048));owner=coffea | |
| 61970 chr11 manual_curation exon 23634060 23634530 . + . Parent=GSCOCT00018117001 | |
| 61971 chr11 manual_curation exon 23630552 23631608 . + . Parent=GSCOCT00018117001 | |
| 61972 chr11 manual_curation CDS 23634060 23634308 . + 0 Parent=GSCOCT00018117001 | |
| 61973 chr11 manual_curation CDS 23631414 23631608 . + 0 Parent=GSCOCT00018117001 | |
| 61974 chr11 manual_curation gene 23637573 23641450 . - . ID=GSCOCG00018116001;Name=Cc11_g07030 | |
| 61975 chr11 manual_curation mRNA 23637573 23641450 . - . ID=GSCOCT00018116001;Parent=GSCOCG00018116001;Name=Cc11_g07030 | |
| 61976 chr11 manual_curation polypeptide 23638225 23641104 . - . ID=GSCOCP00018116001;Dbxref=InterPro:IPR001876,PFAM:PF00641,PROFILE:PS50199,PROSITE:PS01358,SMART:SM00547,SwissProt:Q8S9K3,TAIR:AT1G48570.1,TAIR:AT1G55040.1,TAIR:AT1G70650.1,TrEMBL:B9HW23,TrEMBL:B9SJ21,TrEMBL:F6HFE1;Derives_from=GSCOCT00018116001;Name=Cc11_g07030;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Ran BP2/NZF zinc finger-like superfamily protein,CC_functional_completeness:complete,CC_gene:VAR3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018116001~ Ran BP2/NZF zinc finger-like superfamily protein~ VAR3~ complete;original_location=join(1074004..1074140%2C1075333..1075450%2C1075554..1075897%2C1075993..1076124%2C1076235..1076333%2C1076421..1076883);owner=coffea | |
| 61977 chr11 manual_curation exon 23640968 23641450 . - . Parent=GSCOCT00018116001 | |
| 61978 chr11 manual_curation exon 23639658 23639775 . - . Parent=GSCOCT00018116001 | |
| 61979 chr11 manual_curation exon 23639211 23639554 . - . Parent=GSCOCT00018116001 | |
| 61980 chr11 manual_curation exon 23638984 23639115 . - . Parent=GSCOCT00018116001 | |
| 61981 chr11 manual_curation exon 23638775 23638873 . - . Parent=GSCOCT00018116001 | |
| 61982 chr11 manual_curation exon 23637573 23638687 . - . Parent=GSCOCT00018116001 | |
| 61983 chr11 manual_curation CDS 23640968 23641104 . - 0 Parent=GSCOCT00018116001 | |
| 61984 chr11 manual_curation CDS 23639658 23639775 . - 2 Parent=GSCOCT00018116001 | |
| 61985 chr11 manual_curation CDS 23639211 23639554 . - 0 Parent=GSCOCT00018116001 | |
| 61986 chr11 manual_curation CDS 23638984 23639115 . - 2 Parent=GSCOCT00018116001 | |
| 61987 chr11 manual_curation CDS 23638775 23638873 . - 2 Parent=GSCOCT00018116001 | |
| 61988 chr11 manual_curation CDS 23638225 23638687 . - 2 Parent=GSCOCT00018116001 | |
| 61989 chr11 manual_curation gene 23654781 23656635 . - . ID=GSCOCG00018115001;Name=Cc11_g07040 | |
| 61990 chr11 manual_curation mRNA 23654781 23656635 . - . ID=GSCOCT00018115001;Parent=GSCOCG00018115001;Name=Cc11_g07040 | |
| 61991 chr11 manual_curation polypeptide 23654969 23656538 . - . ID=GSCOCP00018115001;Dbxref=GENE3D:G3DSA:3.90.79.10,InterPro:IPR000086,InterPro:IPR015797,InterPro:IPR020084,PFAM:PF00293,PROSITE:PS00893,SUPERFAMILY:SSF55811,SwissProt:Q9LE73,SwissProt:Q9LQU5,SwissProt:Q9ZU95,TAIR:AT1G14860.1,TAIR:AT1G18300.1,TAIR:AT2G01670.1,TrEMBL:B9SJ22,TrEMBL:C6T3J9,TrEMBL:G7LAJ8;Derives_from=GSCOCT00018115001;Name=Cc11_g07040;Ontology_term=CC_evidence_code:ISS,GO:0016787,CC_EC_number:missing_EC_number,PRODUCT:Nudix hydrolase 17%2C mitochondrial,CC_functional_completeness:complete,CC_gene:NUDT17,CC_gene:NUDT18,CC_gene:NUDT4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018115001~ Nudix hydrolase 17%2C mitochondrial~ NUDT17~ complete;original_location=join(1058570..1058643%2C1058882..1058987%2C1059081..1059164%2C1059337..1059465%2C1059918..1060139);owner=coffea | |
| 61992 chr11 manual_curation exon 23656465 23656635 . - . Parent=GSCOCT00018115001 | |
| 61993 chr11 manual_curation exon 23656121 23656226 . - . Parent=GSCOCT00018115001 | |
| 61994 chr11 manual_curation exon 23655944 23656027 . - . Parent=GSCOCT00018115001 | |
| 61995 chr11 manual_curation exon 23655643 23655771 . - . Parent=GSCOCT00018115001 | |
| 61996 chr11 manual_curation exon 23654781 23655190 . - . Parent=GSCOCT00018115001 | |
| 61997 chr11 manual_curation CDS 23656465 23656538 . - 0 Parent=GSCOCT00018115001 | |
| 61998 chr11 manual_curation CDS 23656121 23656226 . - 2 Parent=GSCOCT00018115001 | |
| 61999 chr11 manual_curation CDS 23655944 23656027 . - 0 Parent=GSCOCT00018115001 | |
| 62000 chr11 manual_curation CDS 23655643 23655771 . - 0 Parent=GSCOCT00018115001 | |
| 62001 chr11 manual_curation CDS 23654969 23655190 . - 0 Parent=GSCOCT00018115001 | |
| 62002 chr11 manual_curation gene 23662297 23663829 . - . ID=GSCOCG00018114001;Name=Cc11_g07050 | |
| 62003 chr11 manual_curation mRNA 23662297 23663829 . - . ID=GSCOCT00018114001;Parent=GSCOCG00018114001;Name=Cc11_g07050 | |
| 62004 chr11 manual_curation polypeptide 23662297 23663729 . - . ID=GSCOCP00018114001;Dbxref=GENE3D:G3DSA:3.90.79.10,InterPro:IPR000086,InterPro:IPR015797,InterPro:IPR020084,PFAM:PF00293,PROSITE:PS00893,SUPERFAMILY:SSF55811,SwissProt:Q9LE73,SwissProt:Q9LQU5,SwissProt:Q9ZU95,TAIR:AT1G14860.1,TAIR:AT1G18300.1,TAIR:AT2G01670.1,TrEMBL:B9HW22,TrEMBL:B9SJ22,TrEMBL:I1K5L3;Derives_from=GSCOCT00018114001;Name=Cc11_g07050;Ontology_term=CC_evidence_code:ISS,GO:0016787,CC_EC_number:3.6.1.52,PRODUCT:Nudix hydrolase 17%2C mitochondrial,CC_functional_completeness:complete,CC_gene:NUDT17,CC_gene:NUDT18,CC_gene:NUDT4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018114001~ Nudix hydrolase 17%2C mitochondrial~ NUDT17~ complete;original_location=join(1051379..1051452%2C1051680..1051785%2C1051937..1052020%2C1052203..1052331%2C1052677..1052811);owner=coffea | |
| 62005 chr11 manual_curation exon 23663656 23663829 . - . Parent=GSCOCT00018114001 | |
| 62006 chr11 manual_curation exon 23663323 23663428 . - . Parent=GSCOCT00018114001 | |
| 62007 chr11 manual_curation exon 23663088 23663171 . - . Parent=GSCOCT00018114001 | |
| 62008 chr11 manual_curation exon 23662777 23662905 . - . Parent=GSCOCT00018114001 | |
| 62009 chr11 manual_curation exon 23662297 23662431 . - . Parent=GSCOCT00018114001 | |
| 62010 chr11 manual_curation CDS 23663656 23663729 . - 0 Parent=GSCOCT00018114001 | |
| 62011 chr11 manual_curation CDS 23663323 23663428 . - 2 Parent=GSCOCT00018114001 | |
| 62012 chr11 manual_curation CDS 23663088 23663171 . - 0 Parent=GSCOCT00018114001 | |
| 62013 chr11 manual_curation CDS 23662777 23662905 . - 0 Parent=GSCOCT00018114001 | |
| 62014 chr11 manual_curation CDS 23662297 23662431 . - 0 Parent=GSCOCT00018114001 | |
| 62015 chr11 manual_curation gene 23685761 23686688 . - . ID=GSCOCG00018112001;Name=Cc11_g07060 | |
| 62016 chr11 manual_curation mRNA 23685761 23686688 . - . ID=GSCOCT00018112001;Parent=GSCOCG00018112001;Name=Cc11_g07060 | |
| 62017 chr11 manual_curation polypeptide 23686031 23686213 . - . ID=GSCOCP00018112001;Derives_from=GSCOCT00018112001;Name=Cc11_g07060;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018112001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1028895..1029077;owner=coffea | |
| 62018 chr11 manual_curation exon 23685761 23686688 . - . Parent=GSCOCT00018112001 | |
| 62019 chr11 manual_curation CDS 23686031 23686213 . - 0 Parent=GSCOCT00018112001 | |
| 62020 chr11 manual_curation gene 23689939 23693071 . + . ID=GSCOCG00018111001;Name=Cc11_g07070 | |
| 62021 chr11 manual_curation mRNA 23689939 23693071 . + . ID=GSCOCT00018111001;Parent=GSCOCG00018111001;Name=Cc11_g07070 | |
| 62022 chr11 manual_curation polypeptide 23690094 23692644 . + . ID=GSCOCP00018111001;Dbxref=InterPro:IPR000424,InterPro:IPR016027,PFAM:PF00436,PROFILE:PS50935,SUPERFAMILY:SSF50249,SwissProt:Q9SX99,TAIR:AT1G47720.1,TrEMBL:A5BBP0,TrEMBL:B9R7I5,TrEMBL:E0CPC3;Derives_from=GSCOCT00018111001;Name=Cc11_g07070;Ontology_term=CC_evidence_code:ISS,GO:0003697,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein OSB1%2C mitochondrial,CC_functional_completeness:modules,CC_gene:OSB1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018111001~ Putative Protein OSB1%2C mitochondrial~ OSB1~ modules;original_location=complement(join(1024763..1025014%2C1024578..1024708%2C1024328..1024466%2C1023146..1023227%2C1022464..1022792));owner=coffea | |
| 62023 chr11 manual_curation exon 23692316 23693071 . + . Parent=GSCOCT00018111001 | |
| 62024 chr11 manual_curation exon 23691881 23691962 . + . Parent=GSCOCT00018111001 | |
| 62025 chr11 manual_curation exon 23690642 23690780 . + . Parent=GSCOCT00018111001 | |
| 62026 chr11 manual_curation exon 23690400 23690530 . + . Parent=GSCOCT00018111001 | |
| 62027 chr11 manual_curation exon 23689939 23690345 . + . Parent=GSCOCT00018111001 | |
| 62028 chr11 manual_curation CDS 23692316 23692644 . + 1 Parent=GSCOCT00018111001 | |
| 62029 chr11 manual_curation CDS 23691881 23691962 . + 0 Parent=GSCOCT00018111001 | |
| 62030 chr11 manual_curation CDS 23690642 23690780 . + 2 Parent=GSCOCT00018111001 | |
| 62031 chr11 manual_curation CDS 23690400 23690530 . + 0 Parent=GSCOCT00018111001 | |
| 62032 chr11 manual_curation CDS 23690094 23690345 . + 0 Parent=GSCOCT00018111001 | |
| 62033 chr11 manual_curation gene 23693548 23695162 . - . ID=GSCOCG00018110001;Name=Cc11_g07080 | |
| 62034 chr11 manual_curation mRNA 23693548 23695162 . - . ID=GSCOCT00018110001;Parent=GSCOCG00018110001;Name=Cc11_g07080 | |
| 62035 chr11 manual_curation polypeptide 23693731 23694921 . - . ID=GSCOCP00018110001;Dbxref=InterPro:IPR021099,PFAM:PF11955,TAIR:AT2G39120.1,TAIR:AT3G58520.1,TAIR:AT5G48040.1,TrEMBL:A9PJ73,TrEMBL:B9GU76,TrEMBL:F6I4B7;Derives_from=GSCOCT00018110001;Name=Cc11_g07080;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Ubiquitin carboxyl-terminal hydrolase family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018110001~ Ubiquitin carboxyl-terminal hydrolase family protein~ unknown_gene~ complete;original_location=1020187..1021377;owner=coffea | |
| 62036 chr11 manual_curation exon 23693548 23695162 . - . Parent=GSCOCT00018110001 | |
| 62037 chr11 manual_curation CDS 23693731 23694921 . - 0 Parent=GSCOCT00018110001 | |
| 62038 chr11 manual_curation gene 23696248 23698977 . + . ID=GSCOCG00018109001;Name=Cc11_g07090 | |
| 62039 chr11 manual_curation mRNA 23696248 23698977 . + . ID=GSCOCT00018109001;Parent=GSCOCG00018109001;Name=Cc11_g07090 | |
| 62040 chr11 manual_curation polypeptide 23696248 23698756 . + . ID=GSCOCP00018109001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q0WSH6,SwissProt:Q3E6Q1,SwissProt:Q9FIB2,TAIR:AT1G11290.1,TAIR:AT4G14850.1,TAIR:AT5G09950.1,TIGRFAMs:TIGR00756,TrEMBL:F6HDQ9,TrEMBL:G7K7Q4,TrEMBL:I1LE43;Derives_from=GSCOCT00018109001;Name=Cc11_g07090;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At4g14850,CC_functional_completeness:complete,CC_gene:LOI1,CC_gene:PCMP-H40,CC_gene:PCMP-H35;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018109001~ Pentatricopeptide repeat-containing protein At4g14850~ LOI1~ complete;original_location=complement(join(1017239..1018860%2C1016352..1016817));owner=coffea | |
| 62041 chr11 manual_curation exon 23698291 23698977 . + . Parent=GSCOCT00018109001 | |
| 62042 chr11 manual_curation exon 23696248 23697869 . + . Parent=GSCOCT00018109001 | |
| 62043 chr11 manual_curation CDS 23698291 23698756 . + 2 Parent=GSCOCT00018109001 | |
| 62044 chr11 manual_curation CDS 23696248 23697869 . + 0 Parent=GSCOCT00018109001 | |
| 62045 chr11 manual_curation gene 23700649 23702462 . - . ID=GSCOCG00018107001;Name=Cc11_g07100 | |
| 62046 chr11 manual_curation mRNA 23700649 23702462 . - . ID=GSCOCT00018107001;Parent=GSCOCG00018107001;Name=Cc11_g07100 | |
| 62047 chr11 manual_curation polypeptide 23700649 23702462 . - . ID=GSCOCP00018107001;Dbxref=InterPro:IPR000823,InterPro:IPR002016,InterPro:IPR010255,InterPro:IPR019794,PFAM:PF00141,PRINTS:PR00458,PRINTS:PR00461,PROFILE:PS50873,PROSITE:PS00436,SUPERFAMILY:SSF48113,SwissProt:Q02200,SwissProt:Q9FLC0,SwissProt:Q9M9Q9,TAIR:AT1G14540.1,TAIR:AT1G14550.1,TAIR:AT5G05340.1,TrEMBL:A4ZCI6,TrEMBL:B9S798,TrEMBL:I1NH68;Derives_from=GSCOCT00018107001;Name=Cc11_g07100;Ontology_term=CC_evidence_code:ISS,GO:0004601,GO:0006979,GO:0020037,GO:0055114,CC_EC_number:1.11.1.7,PRODUCT:Lignin-forming anionic peroxidase,CC_functional_completeness:complete,CC_gene:PER5,CC_gene:PER52;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018107001~ Lignin-forming anionic peroxidase~ PER5~ complete;original_location=join(1012646..1012693%2C1012920..1013111%2C1013260..1013425%2C1014080..1014459);owner=coffea | |
| 62048 chr11 manual_curation exon 23702415 23702462 . - . Parent=GSCOCT00018107001 | |
| 62049 chr11 manual_curation exon 23701997 23702188 . - . Parent=GSCOCT00018107001 | |
| 62050 chr11 manual_curation exon 23701683 23701848 . - . Parent=GSCOCT00018107001 | |
| 62051 chr11 manual_curation exon 23700649 23701028 . - . Parent=GSCOCT00018107001 | |
| 62052 chr11 manual_curation CDS 23702415 23702462 . - 0 Parent=GSCOCT00018107001 | |
| 62053 chr11 manual_curation CDS 23701997 23702188 . - 0 Parent=GSCOCT00018107001 | |
| 62054 chr11 manual_curation CDS 23701683 23701848 . - 0 Parent=GSCOCT00018107001 | |
| 62055 chr11 manual_curation CDS 23700649 23701028 . - 1 Parent=GSCOCT00018107001 | |
| 62056 chr11 manual_curation gene 23707754 23708731 . - . ID=GSCOCG00018104001;Name=Cc11_g07110 | |
| 62057 chr11 manual_curation mRNA 23707754 23708731 . - . ID=GSCOCT00018104001;Parent=GSCOCG00018104001;Name=Cc11_g07110 | |
| 62058 chr11 manual_curation polypeptide 23707754 23708731 . - . ID=GSCOCP00018104001;Dbxref=InterPro:IPR000823,InterPro:IPR002016,InterPro:IPR010255,InterPro:IPR019794,PFAM:PF00141,PRINTS:PR00458,PRINTS:PR00461,PROFILE:PS50873,PROSITE:PS00436,SUPERFAMILY:SSF48113,SwissProt:P22195,SwissProt:Q02200,SwissProt:Q9LE15,TAIR:AT1G14540.1,TAIR:AT1G14550.1,TAIR:AT5G05340.1,TrEMBL:O49192,TrEMBL:O49193,TrEMBL:Q66M49;Derives_from=GSCOCT00018104001;Name=Cc11_g07110;Ontology_term=CC_evidence_code:ISS,GO:0004601,GO:0006979,GO:0020037,GO:0055114,CC_EC_number:1.11.1.7,PRODUCT:Lignin-forming anionic peroxidase,CC_functional_completeness:fragment,CC_gene:PER4,CC_gene:PNC1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018104001~ Lignin-forming anionic peroxidase~ PER4~ fragment;original_location=join(1006377..1006592%2C1006820..1007011%2C1007160..1007354);owner=coffea | |
| 62059 chr11 manual_curation exon 23708516 23708731 . - . Parent=GSCOCT00018104001 | |
| 62060 chr11 manual_curation exon 23708097 23708288 . - . Parent=GSCOCT00018104001 | |
| 62061 chr11 manual_curation exon 23707754 23707948 . - . Parent=GSCOCT00018104001 | |
| 62062 chr11 manual_curation CDS 23708516 23708731 . - 0 Parent=GSCOCT00018104001 | |
| 62063 chr11 manual_curation CDS 23708097 23708288 . - 0 Parent=GSCOCT00018104001 | |
| 62064 chr11 manual_curation CDS 23707754 23707948 . - 0 Parent=GSCOCT00018104001 | |
| 62065 chr11 manual_curation gene 23715382 23715749 . - . ID=GSCOCG00018102001;Name=Cc11_g07120 | |
| 62066 chr11 manual_curation mRNA 23715382 23715749 . - . ID=GSCOCT00018102001;Parent=GSCOCG00018102001;Name=Cc11_g07120 | |
| 62067 chr11 manual_curation polypeptide 23715382 23715749 . - . ID=GSCOCP00018102001;Dbxref=SwissProt:O23624,SwissProt:O24340,SwissProt:Q9LGE3,TAIR:AT4G31380.1,TAIR:AT5G10625.1,TAIR:AT5G24860.1,TrEMBL:B9RT38,TrEMBL:I1MGK6,TrEMBL:I1MRH5;Derives_from=GSCOCT00018102001;Name=Cc11_g07120;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Flowering-promoting factor 1,CC_functional_completeness:complete,CC_gene:FPF1,CC_gene:RAA1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018102001~ Flowering-promoting factor 1~ FPF1~ complete;original_location=join(999359..999422%2C999464..999726);owner=coffea | |
| 62068 chr11 manual_curation exon 23715686 23715749 . - . Parent=GSCOCT00018102001 | |
| 62069 chr11 manual_curation exon 23715382 23715644 . - . Parent=GSCOCT00018102001 | |
| 62070 chr11 manual_curation CDS 23715686 23715749 . - 0 Parent=GSCOCT00018102001 | |
| 62071 chr11 manual_curation CDS 23715382 23715644 . - 1 Parent=GSCOCT00018102001 | |
| 62072 chr11 manual_curation gene 23719611 23721094 . + . ID=GSCOCG00018101001;Name=Cc11_g07130 | |
| 62073 chr11 manual_curation mRNA 23719611 23721094 . + . ID=GSCOCT00018101001;Parent=GSCOCG00018101001;Name=Cc11_g07130 | |
| 62074 chr11 manual_curation polypeptide 23719611 23721094 . + . ID=GSCOCP00018101001;Dbxref=InterPro:IPR000823,InterPro:IPR002016,InterPro:IPR010255,InterPro:IPR019793,InterPro:IPR019794,PFAM:PF00141,PRINTS:PR00458,PRINTS:PR00461,PROFILE:PS50873,PROSITE:PS00435,PROSITE:PS00436,SUPERFAMILY:SSF48113,SwissProt:Q02200,SwissProt:Q9LE15,SwissProt:Q9M9Q9,TAIR:AT1G14540.1,TAIR:AT1G14550.1,TAIR:AT5G05340.1,TrEMBL:B9RC46,TrEMBL:B9S798,TrEMBL:I1NH68;Derives_from=GSCOCT00018101001;Name=Cc11_g07130;Ontology_term=CC_evidence_code:ISS,GO:0004601,GO:0006979,GO:0020037,GO:0055114,CC_EC_number:1.11.1.7,PRODUCT:Lignin-forming anionic peroxidase,CC_functional_completeness:complete,CC_gene:PER4,CC_gene:PER5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018101001~ Lignin-forming anionic peroxidase~ PER4~ complete;original_location=complement(join(995282..995497%2C994860..995051%2C994546..994711%2C994014..994408));owner=coffea | |
| 62075 chr11 manual_curation exon 23720700 23721094 . + . Parent=GSCOCT00018101001 | |
| 62076 chr11 manual_curation exon 23720397 23720562 . + . Parent=GSCOCT00018101001 | |
| 62077 chr11 manual_curation exon 23720057 23720248 . + . Parent=GSCOCT00018101001 | |
| 62078 chr11 manual_curation exon 23719611 23719826 . + . Parent=GSCOCT00018101001 | |
| 62079 chr11 manual_curation CDS 23720700 23721094 . + 1 Parent=GSCOCT00018101001 | |
| 62080 chr11 manual_curation CDS 23720397 23720562 . + 0 Parent=GSCOCT00018101001 | |
| 62081 chr11 manual_curation CDS 23720057 23720248 . + 0 Parent=GSCOCT00018101001 | |
| 62082 chr11 manual_curation CDS 23719611 23719826 . + 0 Parent=GSCOCT00018101001 | |
| 62083 chr11 manual_curation gene 23726332 23729782 . - . ID=GSCOCG00018099001;Name=Cc11_g07140 | |
| 62084 chr11 manual_curation mRNA 23726332 23729782 . - . ID=GSCOCT00018099001;Parent=GSCOCG00018099001;Name=Cc11_g07140 | |
| 62085 chr11 manual_curation polypeptide 23726522 23729782 . - . ID=GSCOCP00018099001;Dbxref=InterPro:IPR001214,InterPro:IPR015353,PFAM:PF00856,PFAM:PF09273,SwissProt:A9X1D0,SwissProt:B0VX69,SwissProt:B1MTJ4,TAIR:AT1G24610.1,TAIR:AT4G20130.1,TrEMBL:B9SJ24,TrEMBL:D7T8L6,TrEMBL:I1KQB1;Derives_from=GSCOCT00018099001;Name=Cc11_g07140;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.1.1.127,PRODUCT:Putative Histone-lysine N-methyltransferase setd3,CC_functional_completeness:fragment,CC_gene:SETD3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018099001~ Putative Histone-lysine N-methyltransferase setd3~ SETD3~ fragment;original_location=join(985326..985656%2C986572..986738%2C987072..987375%2C987486..987742%2C988215..988586);owner=coffea | |
| 62086 chr11 manual_curation exon 23729452 23729782 . - . Parent=GSCOCT00018099001 | |
| 62087 chr11 manual_curation exon 23728370 23728536 . - . Parent=GSCOCT00018099001 | |
| 62088 chr11 manual_curation exon 23727733 23728036 . - . Parent=GSCOCT00018099001 | |
| 62089 chr11 manual_curation exon 23727366 23727622 . - . Parent=GSCOCT00018099001 | |
| 62090 chr11 manual_curation exon 23726332 23726893 . - . Parent=GSCOCT00018099001 | |
| 62091 chr11 manual_curation CDS 23729452 23729782 . - 0 Parent=GSCOCT00018099001 | |
| 62092 chr11 manual_curation CDS 23728370 23728536 . - 1 Parent=GSCOCT00018099001 | |
| 62093 chr11 manual_curation CDS 23727733 23728036 . - 0 Parent=GSCOCT00018099001 | |
| 62094 chr11 manual_curation CDS 23727366 23727622 . - 1 Parent=GSCOCT00018099001 | |
| 62095 chr11 manual_curation CDS 23726522 23726893 . - 0 Parent=GSCOCT00018099001 | |
| 62096 chr11 manual_curation gene 23731978 23733073 . - . ID=GSCOCG00018098001;Name=Cc11_g07150 | |
| 62097 chr11 manual_curation mRNA 23731978 23733073 . - . ID=GSCOCT00018098001;Parent=GSCOCG00018098001;Name=Cc11_g07150 | |
| 62098 chr11 manual_curation polypeptide 23732232 23732801 . - . ID=GSCOCP00018098001;Dbxref=GENE3D:G3DSA:1.10.238.10,InterPro:IPR002048,InterPro:IPR011992,InterPro:IPR018247,InterPro:IPR018248,InterPro:IPR018249,PFAM:PF00036,PROFILE:PS50222,PROSITE:PS00018,SMART:SM00054,SwissProt:Q6L4D4,SwissProt:Q8RZB5,SwissProt:Q9FYK2,TAIR:AT1G18210.1,TAIR:AT1G24620.1,TAIR:AT1G66400.1,TrEMBL:B9SJ25,TrEMBL:G8A011,TrEMBL:Q45W79;Derives_from=GSCOCT00018098001;Name=Cc11_g07150;Ontology_term=CC_evidence_code:ISS,GO:0005509,CC_EC_number:missing_EC_number,PRODUCT:Probable calcium-binding protein CML25,CC_functional_completeness:complete,CC_gene:CML25,CC_gene:CML10,CC_gene:CML15;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018098001~ Probable calcium-binding protein CML25~ CML25~ complete;original_location=982307..982876;owner=coffea | |
| 62099 chr11 manual_curation exon 23731978 23733073 . - . Parent=GSCOCT00018098001 | |
| 62100 chr11 manual_curation CDS 23732232 23732801 . - 0 Parent=GSCOCT00018098001 | |
| 62101 chr11 manual_curation gene 23799516 23800818 . - . ID=GSCOCG00018092001;Name=Cc11_g07160 | |
| 62102 chr11 manual_curation mRNA 23799516 23800818 . - . ID=GSCOCT00018092001;Parent=GSCOCG00018092001;Name=Cc11_g07160 | |
| 62103 chr11 manual_curation polypeptide 23799877 23800716 . - . ID=GSCOCP00018092001;Dbxref=InterPro:IPR003614,InterPro:IPR008176,InterPro:IPR008177,PFAM:PF00304,PRINTS:PR00288,PROSITE:PS00940,SMART:SM00505,SwissProt:Q39182,SwissProt:Q40901,SwissProt:Q9ZUL7,TAIR:AT2G02100.1,TAIR:AT2G02120.1,TAIR:AT2G02130.1,TrEMBL:B1N682,TrEMBL:D7TAI4,TrEMBL:Q9MB66;Derives_from=GSCOCT00018092001;Name=Cc11_g07160;Ontology_term=CC_evidence_code:ISS,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Defensin-like protein,CC_functional_completeness:complete,CC_gene:PDF2.2,CC_gene:PDF2.3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018092001~ Defensin-like protein~ PDF2.2~ complete;original_location=join(914392..914455%2C915059..915231);owner=coffea | |
| 62104 chr11 manual_curation exon 23800653 23800818 . - . Parent=GSCOCT00018092001 | |
| 62105 chr11 manual_curation exon 23799516 23800049 . - . Parent=GSCOCT00018092001 | |
| 62106 chr11 manual_curation CDS 23800653 23800716 . - 0 Parent=GSCOCT00018092001 | |
| 62107 chr11 manual_curation CDS 23799877 23800049 . - 1 Parent=GSCOCT00018092001 | |
| 62108 chr11 manual_curation gene 23804435 23808156 . + . ID=GSCOCG00018091001;Name=Cc11_g07170 | |
| 62109 chr11 manual_curation mRNA 23804435 23808156 . + . ID=GSCOCT00018091001;Parent=GSCOCG00018091001;Name=Cc11_g07170 | |
| 62110 chr11 manual_curation polypeptide 23805530 23807880 . + . ID=GSCOCP00018091001;Dbxref=GENE3D:G3DSA:3.30.160.60,InterPro:IPR007087,InterPro:IPR013087,InterPro:IPR015880,PROFILE:PS50157,PROSITE:PS00028,SMART:SM00355,SwissProt:P17842,SwissProt:Q8VHT8,SwissProt:Q92664,TAIR:AT1G72050.2,TrEMBL:B9T5R4,TrEMBL:D7TQ66,TrEMBL:Q06HM7;Derives_from=GSCOCT00018091001;Name=Cc11_g07170;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0005622,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative transcription factor IIIA,CC_functional_completeness:complete,CC_gene:GTF3A,CC_gene:Gtf3a,CC_gene:gtf3a;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018091001~ Putative transcription factor IIIA~ GTF3A~ complete;original_location=complement(join(909450..909578%2C909173..909307%2C908701..908769%2C908316..908601%2C907901..908136%2C907533..907676%2C907228..907416));owner=coffea | |
| 62111 chr11 manual_curation exon 23804435 23804543 . + . Parent=GSCOCT00018091001 | |
| 62112 chr11 manual_curation exon 23807692 23808156 . + . Parent=GSCOCT00018091001 | |
| 62113 chr11 manual_curation exon 23807432 23807575 . + . Parent=GSCOCT00018091001 | |
| 62114 chr11 manual_curation exon 23806972 23807207 . + . Parent=GSCOCT00018091001 | |
| 62115 chr11 manual_curation exon 23806507 23806792 . + . Parent=GSCOCT00018091001 | |
| 62116 chr11 manual_curation exon 23806339 23806407 . + . Parent=GSCOCT00018091001 | |
| 62117 chr11 manual_curation exon 23805801 23805935 . + . Parent=GSCOCT00018091001 | |
| 62118 chr11 manual_curation exon 23805519 23805658 . + . Parent=GSCOCT00018091001 | |
| 62119 chr11 manual_curation CDS 23807692 23807880 . + 0 Parent=GSCOCT00018091001 | |
| 62120 chr11 manual_curation CDS 23807432 23807575 . + 0 Parent=GSCOCT00018091001 | |
| 62121 chr11 manual_curation CDS 23806972 23807207 . + 1 Parent=GSCOCT00018091001 | |
| 62122 chr11 manual_curation CDS 23806507 23806792 . + 0 Parent=GSCOCT00018091001 | |
| 62123 chr11 manual_curation CDS 23806339 23806407 . + 0 Parent=GSCOCT00018091001 | |
| 62124 chr11 manual_curation CDS 23805801 23805935 . + 0 Parent=GSCOCT00018091001 | |
| 62125 chr11 manual_curation CDS 23805530 23805658 . + 0 Parent=GSCOCT00018091001 | |
| 62126 chr11 manual_curation gene 23809436 23814142 . + . ID=GSCOCG00018090001;Name=Cc11_g07180 | |
| 62127 chr11 manual_curation mRNA 23809436 23814142 . + . ID=GSCOCT00018090001;Parent=GSCOCG00018090001;Name=Cc11_g07180 | |
| 62128 chr11 manual_curation polypeptide 23809584 23813652 . + . ID=GSCOCP00018090001;Dbxref=GENE3D:G3DSA:1.25.40.20,InterPro:IPR002110,InterPro:IPR020683,PFAM:PF00023,PROFILE:PS50088,PROFILE:PS50297,SMART:SM00248,SUPERFAMILY:SSF48403,SwissProt:Q6AWW5,SwissProt:Q9C7A2,SwissProt:Q9ZU96,TAIR:AT2G01680.1,TAIR:AT2G31820.1,TAIR:AT3G12360.1,TrEMBL:A9PDX2,TrEMBL:B9HW17,TrEMBL:F6HFD9;Derives_from=GSCOCT00018090001;Name=Cc11_g07180;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Ankyrin repeat-containing protein At2g01680,CC_functional_completeness:complete,CC_gene:At2g01680,CC_gene:At3g12360,CC_gene:At5g02620;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018090001~ Ankyrin repeat-containing protein At2g01680~ At2g01680~ complete;original_location=complement(join(905236..905524%2C903753..904162%2C901456..902328));owner=coffea | |
| 62129 chr11 manual_curation exon 23812780 23814142 . + . Parent=GSCOCT00018090001 | |
| 62130 chr11 manual_curation exon 23810946 23811355 . + . Parent=GSCOCT00018090001 | |
| 62131 chr11 manual_curation exon 23809436 23809872 . + . Parent=GSCOCT00018090001 | |
| 62132 chr11 manual_curation CDS 23812780 23813652 . + 0 Parent=GSCOCT00018090001 | |
| 62133 chr11 manual_curation CDS 23810946 23811355 . + 1 Parent=GSCOCT00018090001 | |
| 62134 chr11 manual_curation CDS 23809584 23809872 . + 0 Parent=GSCOCT00018090001 | |
| 62135 chr11 manual_curation gene 23815083 23817554 . + . ID=GSCOCG00018089001;Name=Cc11_g07190 | |
| 62136 chr11 manual_curation mRNA 23815083 23817554 . + . ID=GSCOCT00018089001;Parent=GSCOCG00018089001;Name=Cc11_g07190 | |
| 62137 chr11 manual_curation polypeptide 23815083 23817554 . + . ID=GSCOCP00018089001;Dbxref=GENE3D:G3DSA:1.25.40.20,InterPro:IPR002110,InterPro:IPR020683,PFAM:PF00023,PROFILE:PS50088,PROFILE:PS50297,SMART:SM00248,SUPERFAMILY:SSF48403,SwissProt:Q6AWW5,SwissProt:Q6GNY1,SwissProt:Q9C7A2,TAIR:AT1G03670.1,TAIR:AT4G03460.1,TAIR:AT4G03500.1,TrEMBL:A5BKE0,TrEMBL:D7U8X8,TrEMBL:F6HN60;Derives_from=GSCOCT00018089001;Name=Cc11_g07190;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Ankyrin repeat-containing protein At5g02620,CC_functional_completeness:modules,CC_gene:At3g12360,CC_gene:At5g02620,CC_gene:mib1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018089001~ Putative Ankyrin repeat-containing protein At5g02620~ At3g12360~ modules;original_location=complement(join(899431..900025%2C898471..898997%2C897554..898204));owner=coffea | |
| 62138 chr11 manual_curation exon 23816904 23817554 . + . Parent=GSCOCT00018089001 | |
| 62139 chr11 manual_curation exon 23816111 23816637 . + . Parent=GSCOCT00018089001 | |
| 62140 chr11 manual_curation exon 23815083 23815677 . + . Parent=GSCOCT00018089001 | |
| 62141 chr11 manual_curation CDS 23816904 23817554 . + 0 Parent=GSCOCT00018089001 | |
| 62142 chr11 manual_curation CDS 23816111 23816637 . + 1 Parent=GSCOCT00018089001 | |
| 62143 chr11 manual_curation CDS 23815083 23815677 . + 0 Parent=GSCOCT00018089001 | |
| 62144 chr11 manual_curation gene 23827897 23832345 . + . ID=GSCOCG00018085001;Name=Cc11_g07200 | |
| 62145 chr11 manual_curation mRNA 23827897 23832345 . + . ID=GSCOCT00018085001;Parent=GSCOCG00018085001;Name=Cc11_g07200 | |
| 62146 chr11 manual_curation polypeptide 23827897 23832345 . + . ID=GSCOCP00018085001;Dbxref=GENE3D:G3DSA:1.25.40.20,InterPro:IPR002110,InterPro:IPR020683,PROFILE:PS50088,PROFILE:PS50297,SMART:SM00248,SUPERFAMILY:SSF48403,SwissProt:Q6AWW5,SwissProt:Q9C7A2,SwissProt:Q9ZU96,TAIR:AT1G03670.1,TAIR:AT4G03460.1,TAIR:AT4G03500.1,TrEMBL:A5B003,TrEMBL:B9T576,TrEMBL:D7U8X8;Derives_from=GSCOCT00018085001;Name=Cc11_g07200;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Ankyrin repeat family protein,CC_functional_completeness:fragment,CC_gene:At5g02620,CC_gene:At3g12360,CC_gene:At2g01680;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018085001~ Putative Ankyrin repeat family protein~ At5g02620~ fragment;original_location=complement(join(886626..887211%2C885698..886239%2C882763..883386));owner=coffea | |
| 62147 chr11 manual_curation exon 23831722 23832345 . + . Parent=GSCOCT00018085001 | |
| 62148 chr11 manual_curation exon 23828869 23829410 . + . Parent=GSCOCT00018085001 | |
| 62149 chr11 manual_curation exon 23827897 23828482 . + . Parent=GSCOCT00018085001 | |
| 62150 chr11 manual_curation CDS 23831722 23832345 . + 0 Parent=GSCOCT00018085001 | |
| 62151 chr11 manual_curation CDS 23828869 23829410 . + 1 Parent=GSCOCT00018085001 | |
| 62152 chr11 manual_curation CDS 23827897 23828482 . + 0 Parent=GSCOCT00018085001 | |
| 62153 chr11 manual_curation gene 23841778 23842386 . + . ID=GSCOCG00018084001;Name=Cc11_g07210 | |
| 62154 chr11 manual_curation mRNA 23841778 23842386 . + . ID=GSCOCT00018084001;Parent=GSCOCG00018084001;Name=Cc11_g07210 | |
| 62155 chr11 manual_curation polypeptide 23841778 23842386 . + . ID=GSCOCP00018084001;Dbxref=GENE3D:G3DSA:1.25.40.20,InterPro:IPR002110,InterPro:IPR020683,PFAM:PF00023,PROFILE:PS50088,PROFILE:PS50297,SMART:SM00248,SUPERFAMILY:SSF48403,SwissProt:Q9C7A2,TAIR:AT3G09550.1,TAIR:AT3G12360.1,TAIR:AT4G03460.1,TrEMBL:D7U8Y0,TrEMBL:F6GWH1,TrEMBL:F6HN53;Derives_from=GSCOCT00018084001;Name=Cc11_g07210;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Ankyrin repeat family protein,CC_functional_completeness:fragment,CC_gene:At3g12360;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018084001~ Putative Ankyrin repeat family protein~ At3g12360~ fragment;original_location=complement(872722..873330);owner=coffea | |
| 62156 chr11 manual_curation exon 23841778 23842386 . + . Parent=GSCOCT00018084001 | |
| 62157 chr11 manual_curation CDS 23841778 23842386 . + 0 Parent=GSCOCT00018084001 | |
| 62158 chr11 manual_curation gene 23855606 23860165 . + . ID=GSCOCG00018081001;Name=Cc11_g07220 | |
| 62159 chr11 manual_curation mRNA 23855606 23860165 . + . ID=GSCOCT00018081001;Parent=GSCOCG00018081001;Name=Cc11_g07220 | |
| 62160 chr11 manual_curation polypeptide 23855606 23859969 . + . ID=GSCOCP00018081001;Dbxref=GENE3D:G3DSA:1.25.40.20,InterPro:IPR002110,InterPro:IPR020683,PFAM:PF00023,PROFILE:PS50088,PROFILE:PS50297,SMART:SM00248,SUPERFAMILY:SSF48403,SwissProt:Q6AWW5,SwissProt:Q9C7A2,SwissProt:Q9ZU96,TAIR:AT1G03670.1,TAIR:AT4G03460.1,TAIR:AT4G03500.1,TrEMBL:A5BKE0,TrEMBL:A5BZS0,TrEMBL:D7U8X8;Derives_from=GSCOCT00018081001;Name=Cc11_g07220;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Ankyrin repeat-containing protein At3g12360,CC_functional_completeness:complete,CC_gene:At3g12360,CC_gene:At5g02620,CC_gene:At2g01680;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018081001~ Putative Ankyrin repeat-containing protein At3g12360~ At3g12360~ complete;original_location=complement(join(858911..859502%2C856748..857295%2C855139..855777));owner=coffea | |
| 62161 chr11 manual_curation exon 23859331 23860165 . + . Parent=GSCOCT00018081001 | |
| 62162 chr11 manual_curation exon 23857813 23858360 . + . Parent=GSCOCT00018081001 | |
| 62163 chr11 manual_curation exon 23855606 23856197 . + . Parent=GSCOCT00018081001 | |
| 62164 chr11 manual_curation CDS 23859331 23859969 . + 0 Parent=GSCOCT00018081001 | |
| 62165 chr11 manual_curation CDS 23857813 23858360 . + 1 Parent=GSCOCT00018081001 | |
| 62166 chr11 manual_curation CDS 23855606 23856197 . + 0 Parent=GSCOCT00018081001 | |
| 62167 chr11 manual_curation gene 23863438 23863966 . - . ID=GSCOCG00018079001;Name=Cc11_g07230 | |
| 62168 chr11 manual_curation mRNA 23863438 23863966 . - . ID=GSCOCT00018079001;Parent=GSCOCG00018079001;Name=Cc11_g07230 | |
| 62169 chr11 manual_curation polypeptide 23863438 23863921 . - . ID=GSCOCP00018079001;Derives_from=GSCOCT00018079001;Name=Cc11_g07230;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018079001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(851187..851243%2C851482..851670);owner=coffea | |
| 62170 chr11 manual_curation exon 23863865 23863966 . - . Parent=GSCOCT00018079001 | |
| 62171 chr11 manual_curation exon 23863438 23863626 . - . Parent=GSCOCT00018079001 | |
| 62172 chr11 manual_curation CDS 23863865 23863921 . - 0 Parent=GSCOCT00018079001 | |
| 62173 chr11 manual_curation CDS 23863438 23863626 . - 0 Parent=GSCOCT00018079001 | |
| 62174 chr11 manual_curation gene 23866963 23867465 . + . ID=GSCOCG00018078001;Name=Cc11_g07240 | |
| 62175 chr11 manual_curation mRNA 23866963 23867465 . + . ID=GSCOCT00018078001;Parent=GSCOCG00018078001;Name=Cc11_g07240 | |
| 62176 chr11 manual_curation polypeptide 23866963 23867465 . + . ID=GSCOCP00018078001;Dbxref=InterPro:IPR013094,PFAM:PF07859,SwissProt:Q9FX92,SwissProt:Q9SMM9,SwissProt:Q9SX78,TAIR:AT1G47480.1,TAIR:AT1G49640.1,TAIR:AT3G48700.1,TrEMBL:C0ILQ0,TrEMBL:C5Z6I4,TrEMBL:I1I7S8;Derives_from=GSCOCT00018078001;Name=Cc11_g07240;Ontology_term=CC_evidence_code:ISS,GO:0008152,GO:0016787,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:CXE2,CC_gene:CXE13,CC_gene:CXE3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018078001~ Putative uncharacterized protein~ CXE2~ fragment;original_location=complement(join(848012..848145%2C847643..847832));owner=coffea | |
| 62177 chr11 manual_curation exon 23867276 23867465 . + . Parent=GSCOCT00018078001 | |
| 62178 chr11 manual_curation exon 23866963 23867096 . + . Parent=GSCOCT00018078001 | |
| 62179 chr11 manual_curation CDS 23867276 23867465 . + 2 Parent=GSCOCT00018078001 | |
| 62180 chr11 manual_curation CDS 23866963 23867096 . + 0 Parent=GSCOCT00018078001 | |
| 62181 chr11 manual_curation gene 23919424 23922565 . - . ID=GSCOCG00018076001;Name=Cc11_g07250 | |
| 62182 chr11 manual_curation mRNA 23919424 23922565 . - . ID=GSCOCT00018076001;Parent=GSCOCG00018076001;Name=Cc11_g07250 | |
| 62183 chr11 manual_curation polypeptide 23919424 23922565 . - . ID=GSCOCP00018076001;Dbxref=GENE3D:G3DSA:1.25.40.20,InterPro:IPR002110,InterPro:IPR020683,PFAM:PF00023,PROFILE:PS50088,PROFILE:PS50297,SMART:SM00248,SUPERFAMILY:SSF48403,SwissProt:Q6AWW5,SwissProt:Q9C7A2,SwissProt:Q9ZU96,TAIR:AT1G03670.1,TAIR:AT4G03460.1,TAIR:AT4G03500.1,TrEMBL:A5B003,TrEMBL:F6GWH9,TrEMBL:F6HDY4;Derives_from=GSCOCT00018076001;Name=Cc11_g07250;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Ankyrin repeat-containing protein At3g12360,CC_functional_completeness:fragment,CC_gene:At3g12360,CC_gene:At5g02620,CC_gene:At2g01680;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018076001~ Putative Ankyrin repeat-containing protein At3g12360~ At3g12360~ fragment;original_location=join(792543..792549%2C793493..794040%2C794531..794584%2C795052..795684);owner=coffea | |
| 62184 chr11 manual_curation exon 23922559 23922565 . - . Parent=GSCOCT00018076001 | |
| 62185 chr11 manual_curation exon 23921068 23921615 . - . Parent=GSCOCT00018076001 | |
| 62186 chr11 manual_curation exon 23920524 23920577 . - . Parent=GSCOCT00018076001 | |
| 62187 chr11 manual_curation exon 23919424 23920056 . - . Parent=GSCOCT00018076001 | |
| 62188 chr11 manual_curation CDS 23922559 23922565 . - 0 Parent=GSCOCT00018076001 | |
| 62189 chr11 manual_curation CDS 23921068 23921615 . - 1 Parent=GSCOCT00018076001 | |
| 62190 chr11 manual_curation CDS 23920524 23920577 . - 0 Parent=GSCOCT00018076001 | |
| 62191 chr11 manual_curation CDS 23919424 23920056 . - 0 Parent=GSCOCT00018076001 | |
| 62192 chr11 manual_curation gene 23933227 23937074 . - . ID=GSCOCG00018075001;Name=Cc11_g07260 | |
| 62193 chr11 manual_curation mRNA 23933227 23937074 . - . ID=GSCOCT00018075001;Parent=GSCOCG00018075001;Name=Cc11_g07260 | |
| 62194 chr11 manual_curation polypeptide 23933579 23937056 . - . ID=GSCOCP00018075001;Dbxref=InterPro:IPR021841,PFAM:PF11916,SwissProt:Q5ZIW5,SwissProt:Q66L58,SwissProt:Q68F38,TAIR:AT2G01690.2,TrEMBL:A5B6J4,TrEMBL:B9SJ28,TrEMBL:D7T8L4;Derives_from=GSCOCT00018075001;Name=Cc11_g07260;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:ARM repeat superfamily protein,CC_functional_completeness:fragment,CC_gene:vac14,CC_gene:VAC14;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018075001~ ARM repeat superfamily protein~ vac14~ fragment;original_location=join(778052..778060%2C778272..778433%2C778590..778718%2C780086..780154%2C781018..781311%2C781425..781529);owner=coffea | |
| 62195 chr11 manual_curation exon 23937048 23937074 . - . Parent=GSCOCT00018075001 | |
| 62196 chr11 manual_curation exon 23936675 23936836 . - . Parent=GSCOCT00018075001 | |
| 62197 chr11 manual_curation exon 23936390 23936518 . - . Parent=GSCOCT00018075001 | |
| 62198 chr11 manual_curation exon 23934954 23935022 . - . Parent=GSCOCT00018075001 | |
| 62199 chr11 manual_curation exon 23933797 23934090 . - . Parent=GSCOCT00018075001 | |
| 62200 chr11 manual_curation exon 23933227 23933683 . - . Parent=GSCOCT00018075001 | |
| 62201 chr11 manual_curation CDS 23937048 23937056 . - 0 Parent=GSCOCT00018075001 | |
| 62202 chr11 manual_curation CDS 23936675 23936836 . - 0 Parent=GSCOCT00018075001 | |
| 62203 chr11 manual_curation CDS 23936390 23936518 . - 0 Parent=GSCOCT00018075001 | |
| 62204 chr11 manual_curation CDS 23934954 23935022 . - 0 Parent=GSCOCT00018075001 | |
| 62205 chr11 manual_curation CDS 23933797 23934090 . - 0 Parent=GSCOCT00018075001 | |
| 62206 chr11 manual_curation CDS 23933579 23933683 . - 0 Parent=GSCOCT00018075001 | |
| 62207 chr11 manual_curation gene 23937236 23943915 . - . ID=GSCOCG00018074001;Name=Cc11_g07270 | |
| 62208 chr11 manual_curation mRNA 23937236 23943915 . - . ID=GSCOCT00018074001;Parent=GSCOCG00018074001;Name=Cc11_g07270 | |
| 62209 chr11 manual_curation polypeptide 23937236 23943488 . - . ID=GSCOCP00018074001;Dbxref=GENE3D:G3DSA:1.25.10.10,InterPro:IPR000357,InterPro:IPR011989,InterPro:IPR016024,InterPro:IPR021133,PFAM:PF02985,PROFILE:PS50077,SUPERFAMILY:SSF48371,SwissProt:Q5ZIW5,SwissProt:Q66L58,SwissProt:Q68F38,TAIR:AT2G01690.2;Derives_from=GSCOCT00018074001;Name=Cc11_g07270;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein VAC14 homolog,CC_functional_completeness:fragment,CC_gene:vac14,CC_gene:VAC14;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018074001~ Putative Protein VAC14 homolog~ vac14~ fragment;original_location=join(771620..771709%2C771801..771914%2C772063..772128%2C773534..773623%2C773704..773823%2C773921..773949%2C774062..774204%2C774565..774659%2C775104..775190%2C775317..775424%2C775541..775632%2C775813..775894%2C776467..776532%2C777720..777872);owner=coffea | |
| 62210 chr11 manual_curation exon 23943399 23943915 . - . Parent=GSCOCT00018074001 | |
| 62211 chr11 manual_curation exon 23943194 23943307 . - . Parent=GSCOCT00018074001 | |
| 62212 chr11 manual_curation exon 23942980 23943045 . - . Parent=GSCOCT00018074001 | |
| 62213 chr11 manual_curation exon 23941485 23941574 . - . Parent=GSCOCT00018074001 | |
| 62214 chr11 manual_curation exon 23941285 23941404 . - . Parent=GSCOCT00018074001 | |
| 62215 chr11 manual_curation exon 23941159 23941187 . - . Parent=GSCOCT00018074001 | |
| 62216 chr11 manual_curation exon 23940904 23941046 . - . Parent=GSCOCT00018074001 | |
| 62217 chr11 manual_curation exon 23940449 23940543 . - . Parent=GSCOCT00018074001 | |
| 62218 chr11 manual_curation exon 23939918 23940004 . - . Parent=GSCOCT00018074001 | |
| 62219 chr11 manual_curation exon 23939684 23939791 . - . Parent=GSCOCT00018074001 | |
| 62220 chr11 manual_curation exon 23939476 23939567 . - . Parent=GSCOCT00018074001 | |
| 62221 chr11 manual_curation exon 23939214 23939295 . - . Parent=GSCOCT00018074001 | |
| 62222 chr11 manual_curation exon 23938576 23938641 . - . Parent=GSCOCT00018074001 | |
| 62223 chr11 manual_curation exon 23937236 23937388 . - . Parent=GSCOCT00018074001 | |
| 62224 chr11 manual_curation CDS 23943399 23943488 . - 0 Parent=GSCOCT00018074001 | |
| 62225 chr11 manual_curation CDS 23943194 23943307 . - 0 Parent=GSCOCT00018074001 | |
| 62226 chr11 manual_curation CDS 23942980 23943045 . - 0 Parent=GSCOCT00018074001 | |
| 62227 chr11 manual_curation CDS 23941485 23941574 . - 0 Parent=GSCOCT00018074001 | |
| 62228 chr11 manual_curation CDS 23941285 23941404 . - 0 Parent=GSCOCT00018074001 | |
| 62229 chr11 manual_curation CDS 23941159 23941187 . - 0 Parent=GSCOCT00018074001 | |
| 62230 chr11 manual_curation CDS 23940904 23941046 . - 2 Parent=GSCOCT00018074001 | |
| 62231 chr11 manual_curation CDS 23940449 23940543 . - 1 Parent=GSCOCT00018074001 | |
| 62232 chr11 manual_curation CDS 23939918 23940004 . - 0 Parent=GSCOCT00018074001 | |
| 62233 chr11 manual_curation CDS 23939684 23939791 . - 0 Parent=GSCOCT00018074001 | |
| 62234 chr11 manual_curation CDS 23939476 23939567 . - 0 Parent=GSCOCT00018074001 | |
| 62235 chr11 manual_curation CDS 23939214 23939295 . - 2 Parent=GSCOCT00018074001 | |
| 62236 chr11 manual_curation CDS 23938576 23938641 . - 0 Parent=GSCOCT00018074001 | |
| 62237 chr11 manual_curation CDS 23937236 23937388 . - 0 Parent=GSCOCT00018074001 | |
| 62238 chr11 manual_curation gene 23948514 23954301 . + . ID=GSCOCG00018073001;Name=Cc11_g07280 | |
| 62239 chr11 manual_curation mRNA 23948514 23954301 . + . ID=GSCOCT00018073001;Parent=GSCOCG00018073001;Name=Cc11_g07280 | |
| 62240 chr11 manual_curation polypeptide 23948589 23953962 . + . ID=GSCOCP00018073001;Dbxref=GENE3D:G3DSA:3.30.1700.10,GENE3D:G3DSA:3.30.230.20,InterPro:IPR004463,InterPro:IPR011334,InterPro:IPR015870,InterPro:IPR020568,PFAM:PF03331,SUPERFAMILY:SSF54211,SwissProt:P0C2G7,SwissProt:Q3MH15,SwissProt:Q8YUR5,TAIR:AT1G24880.1,TAIR:AT1G25054.1,TAIR:AT1G25145.1,TIGRFAMs:TIGR00325,TrEMBL:A5BIX8,TrEMBL:E2RTM8,TrEMBL:I1JDH4;Derives_from=GSCOCT00018073001;Name=Cc11_g07280;Ontology_term=CC_evidence_code:ISS,GO:0008759,GO:0009245,CC_EC_number:missing_EC_number,PRODUCT:UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase,CC_functional_completeness:complete,CC_gene:At1g24793,CC_gene:lpxC;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018073001~ UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase~ At1g24793~ complete;original_location=complement(join(766457..766519%2C766040..766351%2C765077..765283%2C763730..763831%2C762800..762864%2C761768..761912%2C761146..761199));owner=coffea | |
| 62241 chr11 manual_curation exon 23953909 23954301 . + . Parent=GSCOCT00018073001 | |
| 62242 chr11 manual_curation exon 23953196 23953340 . + . Parent=GSCOCT00018073001 | |
| 62243 chr11 manual_curation exon 23952244 23952308 . + . Parent=GSCOCT00018073001 | |
| 62244 chr11 manual_curation exon 23951277 23951378 . + . Parent=GSCOCT00018073001 | |
| 62245 chr11 manual_curation exon 23949825 23950031 . + . Parent=GSCOCT00018073001 | |
| 62246 chr11 manual_curation exon 23948757 23949068 . + . Parent=GSCOCT00018073001 | |
| 62247 chr11 manual_curation exon 23948514 23948651 . + . Parent=GSCOCT00018073001 | |
| 62248 chr11 manual_curation CDS 23953909 23953962 . + 0 Parent=GSCOCT00018073001 | |
| 62249 chr11 manual_curation CDS 23953196 23953340 . + 2 Parent=GSCOCT00018073001 | |
| 62250 chr11 manual_curation CDS 23952244 23952308 . + 0 Parent=GSCOCT00018073001 | |
| 62251 chr11 manual_curation CDS 23951277 23951378 . + 0 Parent=GSCOCT00018073001 | |
| 62252 chr11 manual_curation CDS 23949825 23950031 . + 0 Parent=GSCOCT00018073001 | |
| 62253 chr11 manual_curation CDS 23948757 23949068 . + 0 Parent=GSCOCT00018073001 | |
| 62254 chr11 manual_curation CDS 23948589 23948651 . + 0 Parent=GSCOCT00018073001 | |
| 62255 chr11 manual_curation gene 23964431 23969265 . - . ID=GSCOCG00018071001;Name=Cc11_g07290 | |
| 62256 chr11 manual_curation mRNA 23964431 23969265 . - . ID=GSCOCT00018071001;Parent=GSCOCG00018071001;Name=Cc11_g07290 | |
| 62257 chr11 manual_curation polypeptide 23964951 23968749 . - . ID=GSCOCP00018071001;Dbxref=InterPro:IPR001841,InterPro:IPR018957,PFAM:PF00097,PROFILE:PS50089,SMART:SM00184,SwissProt:Q8GUU2,SwissProt:Q93Z92,SwissProt:Q9LN71,TAIR:AT1G68070.1,TAIR:AT2G01735.1,TAIR:AT3G61180.1,TrEMBL:B9HJG7,TrEMBL:B9SJ31,TrEMBL:I1KKV7;Derives_from=GSCOCT00018071001;Name=Cc11_g07290;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:E3 ubiquitin protein ligase RIE1,CC_functional_completeness:fragment,CC_gene:RIE1,CC_gene:At4g11680,CC_gene:At1g12760;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018071001~ E3 ubiquitin protein ligase RIE1~ RIE1~ fragment;original_location=join(746359..746615%2C747979..748098%2C749138..749270%2C749383..749538%2C749996..750157);owner=coffea | |
| 62258 chr11 manual_curation exon 23968493 23969265 . - . Parent=GSCOCT00018071001 | |
| 62259 chr11 manual_curation exon 23967010 23967129 . - . Parent=GSCOCT00018071001 | |
| 62260 chr11 manual_curation exon 23965838 23965970 . - . Parent=GSCOCT00018071001 | |
| 62261 chr11 manual_curation exon 23965570 23965725 . - . Parent=GSCOCT00018071001 | |
| 62262 chr11 manual_curation exon 23964431 23965112 . - . Parent=GSCOCT00018071001 | |
| 62263 chr11 manual_curation CDS 23968493 23968749 . - 0 Parent=GSCOCT00018071001 | |
| 62264 chr11 manual_curation CDS 23967010 23967129 . - 2 Parent=GSCOCT00018071001 | |
| 62265 chr11 manual_curation CDS 23965838 23965970 . - 2 Parent=GSCOCT00018071001 | |
| 62266 chr11 manual_curation CDS 23965570 23965725 . - 0 Parent=GSCOCT00018071001 | |
| 62267 chr11 manual_curation CDS 23964951 23965112 . - 0 Parent=GSCOCT00018071001 | |
| 62268 chr11 manual_curation gene 23975176 23976451 . - . ID=GSCOCG00018070001;Name=Cc11_g07300 | |
| 62269 chr11 manual_curation mRNA 23975176 23976451 . - . ID=GSCOCT00018070001;Parent=GSCOCG00018070001;Name=Cc11_g07300 | |
| 62270 chr11 manual_curation polypeptide 23975449 23976342 . - . ID=GSCOCP00018070001;Dbxref=TAIR:AT1G31130.1,TAIR:AT2G03330.1,TAIR:AT3G11810.1,TrEMBL:B9HIB2,TrEMBL:D7LQG5,TrEMBL:Q9SF17;Derives_from=GSCOCT00018070001;Name=Cc11_g07300;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018070001~ Putative unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G03330.1)%3B Has 141 Blast hits to 141 proteins in 21 species: Archae - 0%3B Bacteria - 9%3B Metazoa - 0%3B Fungi - 0%3B Plants - 131%3B Viruses - 0%3B Other Eukaryotes - 1 (source: NCBI BLink).~ unknown_gene~ complete;original_location=738766..739659;owner=coffea | |
| 62271 chr11 manual_curation exon 23975176 23976451 . - . Parent=GSCOCT00018070001 | |
| 62272 chr11 manual_curation CDS 23975449 23976342 . - 0 Parent=GSCOCT00018070001 | |
| 62273 chr11 manual_curation gene 24000829 24013707 . - . ID=GSCOCG00018068001;Name=Cc11_g07310 | |
| 62274 chr11 manual_curation mRNA 24000829 24013707 . - . ID=GSCOCT00018068001;Parent=GSCOCG00018068001;Name=Cc11_g07310 | |
| 62275 chr11 manual_curation polypeptide 24001086 24013456 . - . ID=GSCOCP00018068001;Dbxref=InterPro:IPR001279,InterPro:IPR011108,InterPro:IPR022712,PFAM:PF00753,PFAM:PF07521,PFAM:PF10996,SMART:SM00849,SwissProt:Q54YL3,SwissProt:Q8GUU3,SwissProt:Q9CWS4,TAIR:AT1G61010.1,TAIR:AT2G01730.1,TAIR:AT5G23880.1,TrEMBL:B9HVV0,TrEMBL:B9SJ31,TrEMBL:Q6E435;Derives_from=GSCOCT00018068001;Name=Cc11_g07310;Ontology_term=CC_evidence_code:ISS,GO:0016787,CC_EC_number:missing_EC_number,PRODUCT:Cleavage and polyadenylation specificity factor subunit 3-II,CC_functional_completeness:complete,CC_gene:CPSF73-II,CC_gene:ints11,CC_gene:Cpsf3l;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018068001~ Cleavage and polyadenylation specificity factor subunit 3-II~ CPSF73-II~ complete;original_location=join(701652..701676%2C701868..702051%2C702129..702201%2C702413..702530%2C703001..703074%2C703478..703614%2C704971..705034%2C705888..705953%2C707398..707467%2C710348..710452%2C711095..711236%2C712312..712411%2C713237..714022);owner=coffea | |
| 62276 chr11 manual_curation exon 24013432 24013707 . - . Parent=GSCOCT00018068001 | |
| 62277 chr11 manual_curation exon 24013057 24013240 . - . Parent=GSCOCT00018068001 | |
| 62278 chr11 manual_curation exon 24012907 24012979 . - . Parent=GSCOCT00018068001 | |
| 62279 chr11 manual_curation exon 24012578 24012695 . - . Parent=GSCOCT00018068001 | |
| 62280 chr11 manual_curation exon 24012034 24012107 . - . Parent=GSCOCT00018068001 | |
| 62281 chr11 manual_curation exon 24011494 24011630 . - . Parent=GSCOCT00018068001 | |
| 62282 chr11 manual_curation exon 24010074 24010137 . - . Parent=GSCOCT00018068001 | |
| 62283 chr11 manual_curation exon 24009155 24009220 . - . Parent=GSCOCT00018068001 | |
| 62284 chr11 manual_curation exon 24007641 24007710 . - . Parent=GSCOCT00018068001 | |
| 62285 chr11 manual_curation exon 24004656 24004760 . - . Parent=GSCOCT00018068001 | |
| 62286 chr11 manual_curation exon 24003872 24004013 . - . Parent=GSCOCT00018068001 | |
| 62287 chr11 manual_curation exon 24002697 24002796 . - . Parent=GSCOCT00018068001 | |
| 62288 chr11 manual_curation exon 24000829 24001871 . - . Parent=GSCOCT00018068001 | |
| 62289 chr11 manual_curation CDS 24013432 24013456 . - 0 Parent=GSCOCT00018068001 | |
| 62290 chr11 manual_curation CDS 24013057 24013240 . - 1 Parent=GSCOCT00018068001 | |
| 62291 chr11 manual_curation CDS 24012907 24012979 . - 2 Parent=GSCOCT00018068001 | |
| 62292 chr11 manual_curation CDS 24012578 24012695 . - 0 Parent=GSCOCT00018068001 | |
| 62293 chr11 manual_curation CDS 24012034 24012107 . - 1 Parent=GSCOCT00018068001 | |
| 62294 chr11 manual_curation CDS 24011494 24011630 . - 0 Parent=GSCOCT00018068001 | |
| 62295 chr11 manual_curation CDS 24010074 24010137 . - 2 Parent=GSCOCT00018068001 | |
| 62296 chr11 manual_curation CDS 24009155 24009220 . - 0 Parent=GSCOCT00018068001 | |
| 62297 chr11 manual_curation CDS 24007641 24007710 . - 0 Parent=GSCOCT00018068001 | |
| 62298 chr11 manual_curation CDS 24004656 24004760 . - 1 Parent=GSCOCT00018068001 | |
| 62299 chr11 manual_curation CDS 24003872 24004013 . - 1 Parent=GSCOCT00018068001 | |
| 62300 chr11 manual_curation CDS 24002697 24002796 . - 2 Parent=GSCOCT00018068001 | |
| 62301 chr11 manual_curation CDS 24001086 24001871 . - 0 Parent=GSCOCT00018068001 | |
| 62302 chr11 manual_curation gene 24014485 24015898 . - . ID=GSCOCG00018067001;Name=Cc11_g07320 | |
| 62303 chr11 manual_curation mRNA 24014485 24015898 . - . ID=GSCOCT00018067001;Parent=GSCOCG00018067001;Name=Cc11_g07320 | |
| 62304 chr11 manual_curation polypeptide 24014485 24015898 . - . ID=GSCOCP00018067001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:P0C894,SwissProt:Q9FIX3,SwissProt:Q9ZUA2,TAIR:AT2G01740.1,TAIR:AT2G02150.1,TAIR:AT5G39710.1,TIGRFAMs:TIGR00756,TrEMBL:B9SJ30,TrEMBL:D7LLV1,TrEMBL:I1GXX5;Derives_from=GSCOCT00018067001;Name=Cc11_g07320;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Pentatricopeptide repeat-containing protein At2g01740,CC_functional_completeness:complete,CC_gene:At2g01740,CC_gene:EMB2745,CC_gene:At2g02150;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018067001~ Putative Pentatricopeptide repeat-containing protein At2g01740~ At2g01740~ complete;original_location=join(699210..699975%2C700310..700623);owner=coffea | |
| 62305 chr11 manual_curation exon 24015133 24015898 . - . Parent=GSCOCT00018067001 | |
| 62306 chr11 manual_curation exon 24014485 24014798 . - . Parent=GSCOCT00018067001 | |
| 62307 chr11 manual_curation CDS 24015133 24015898 . - 0 Parent=GSCOCT00018067001 | |
| 62308 chr11 manual_curation CDS 24014485 24014798 . - 1 Parent=GSCOCT00018067001 | |
| 62309 chr11 manual_curation gene 24015963 24016839 . - . ID=GSCOCG00018066001;Name=Cc11_g07330 | |
| 62310 chr11 manual_curation mRNA 24015963 24016839 . - . ID=GSCOCT00018066001;Parent=GSCOCG00018066001;Name=Cc11_g07330 | |
| 62311 chr11 manual_curation polypeptide 24015963 24016160 . - . ID=GSCOCP00018066001;Derives_from=GSCOCT00018066001;Name=Cc11_g07330;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018066001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=698948..699145;owner=coffea | |
| 62312 chr11 manual_curation exon 24015963 24016839 . - . Parent=GSCOCT00018066001 | |
| 62313 chr11 manual_curation CDS 24015963 24016160 . - 0 Parent=GSCOCT00018066001 | |
| 62314 chr11 manual_curation gene 24016897 24018973 . - . ID=GSCOCG00018065001;Name=Cc11_g07340 | |
| 62315 chr11 manual_curation mRNA 24016897 24018973 . - . ID=GSCOCT00018065001;Parent=GSCOCG00018065001;Name=Cc11_g07340 | |
| 62316 chr11 manual_curation polypeptide 24018181 24018973 . - . ID=GSCOCP00018065001;Derives_from=GSCOCT00018065001;Name=Cc11_g07340;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018065001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(696135..696322%2C696885..696927);owner=coffea | |
| 62317 chr11 manual_curation exon 24018786 24018973 . - . Parent=GSCOCT00018065001 | |
| 62318 chr11 manual_curation exon 24016897 24018223 . - . Parent=GSCOCT00018065001 | |
| 62319 chr11 manual_curation CDS 24018786 24018973 . - 0 Parent=GSCOCT00018065001 | |
| 62320 chr11 manual_curation CDS 24018181 24018223 . - 2 Parent=GSCOCT00018065001 | |
| 62321 chr11 manual_curation gene 24023305 24030698 . - . ID=GSCOCG00018063001;Name=Cc11_g07350 | |
| 62322 chr11 manual_curation mRNA 24023305 24030698 . - . ID=GSCOCT00018063001;Parent=GSCOCG00018063001;Name=Cc11_g07350 | |
| 62323 chr11 manual_curation polypeptide 24023710 24029504 . - . ID=GSCOCP00018063001;Dbxref=GENE3D:G3DSA:3.40.120.10,InterPro:IPR005841,InterPro:IPR005843,InterPro:IPR005844,InterPro:IPR005845,InterPro:IPR005846,InterPro:IPR016055,InterPro:IPR016066,PFAM:PF00408,PFAM:PF02878,PFAM:PF02879,PFAM:PF02880,PRINTS:PR00509,PROSITE:PS00710,SUPERFAMILY:SSF53738,SwissProt:P93805,SwissProt:Q9M4G4,SwissProt:Q9ZSQ4,TAIR:AT1G23190.1,TAIR:AT1G70730.3,TAIR:AT5G51820.1,TrEMBL:B9HW41,TrEMBL:B9SP64,TrEMBL:Q6S3D6;Derives_from=GSCOCT00018063001;Name=Cc11_g07350;Ontology_term=CC_evidence_code:ISS,GO:0000287,GO:0005975,CC_EC_number:5.4.2.2,PRODUCT:Phosphoglucomutase%2C cytoplasmic,CC_functional_completeness:modules,CC_gene:PGM1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018063001~ Phosphoglucomutase%2C cytoplasmic~ PGM1~ modules;original_location=join(685604..686221%2C686703..686816%2C686926..686988%2C687441..687560%2C687650..687750%2C687839..687898%2C687972..688071%2C688187..688332%2C688408..688503%2C688771..688834%2C689025..689106%2C689216..689391%2C689529..689605%2C690774..690906%2C691121..691237%2C691327..691398);owner=coffea | |
| 62324 chr11 manual_curation exon 24028887 24030698 . - . Parent=GSCOCT00018063001 | |
| 62325 chr11 manual_curation exon 24028292 24028405 . - . Parent=GSCOCT00018063001 | |
| 62326 chr11 manual_curation exon 24028120 24028182 . - . Parent=GSCOCT00018063001 | |
| 62327 chr11 manual_curation exon 24027548 24027667 . - . Parent=GSCOCT00018063001 | |
| 62328 chr11 manual_curation exon 24027358 24027458 . - . Parent=GSCOCT00018063001 | |
| 62329 chr11 manual_curation exon 24027210 24027269 . - . Parent=GSCOCT00018063001 | |
| 62330 chr11 manual_curation exon 24027037 24027136 . - . Parent=GSCOCT00018063001 | |
| 62331 chr11 manual_curation exon 24026776 24026921 . - . Parent=GSCOCT00018063001 | |
| 62332 chr11 manual_curation exon 24026605 24026700 . - . Parent=GSCOCT00018063001 | |
| 62333 chr11 manual_curation exon 24026274 24026337 . - . Parent=GSCOCT00018063001 | |
| 62334 chr11 manual_curation exon 24026002 24026083 . - . Parent=GSCOCT00018063001 | |
| 62335 chr11 manual_curation exon 24025717 24025892 . - . Parent=GSCOCT00018063001 | |
| 62336 chr11 manual_curation exon 24025503 24025579 . - . Parent=GSCOCT00018063001 | |
| 62337 chr11 manual_curation exon 24024202 24024334 . - . Parent=GSCOCT00018063001 | |
| 62338 chr11 manual_curation exon 24023871 24023987 . - . Parent=GSCOCT00018063001 | |
| 62339 chr11 manual_curation exon 24023305 24023781 . - . Parent=GSCOCT00018063001 | |
| 62340 chr11 manual_curation CDS 24028887 24029504 . - 0 Parent=GSCOCT00018063001 | |
| 62341 chr11 manual_curation CDS 24028292 24028405 . - 0 Parent=GSCOCT00018063001 | |
| 62342 chr11 manual_curation CDS 24028120 24028182 . - 0 Parent=GSCOCT00018063001 | |
| 62343 chr11 manual_curation CDS 24027548 24027667 . - 0 Parent=GSCOCT00018063001 | |
| 62344 chr11 manual_curation CDS 24027358 24027458 . - 0 Parent=GSCOCT00018063001 | |
| 62345 chr11 manual_curation CDS 24027210 24027269 . - 2 Parent=GSCOCT00018063001 | |
| 62346 chr11 manual_curation CDS 24027037 24027136 . - 2 Parent=GSCOCT00018063001 | |
| 62347 chr11 manual_curation CDS 24026776 24026921 . - 0 Parent=GSCOCT00018063001 | |
| 62348 chr11 manual_curation CDS 24026605 24026700 . - 2 Parent=GSCOCT00018063001 | |
| 62349 chr11 manual_curation CDS 24026274 24026337 . - 2 Parent=GSCOCT00018063001 | |
| 62350 chr11 manual_curation CDS 24026002 24026083 . - 0 Parent=GSCOCT00018063001 | |
| 62351 chr11 manual_curation CDS 24025717 24025892 . - 1 Parent=GSCOCT00018063001 | |
| 62352 chr11 manual_curation CDS 24025503 24025579 . - 0 Parent=GSCOCT00018063001 | |
| 62353 chr11 manual_curation CDS 24024202 24024334 . - 2 Parent=GSCOCT00018063001 | |
| 62354 chr11 manual_curation CDS 24023871 24023987 . - 0 Parent=GSCOCT00018063001 | |
| 62355 chr11 manual_curation CDS 24023710 24023781 . - 0 Parent=GSCOCT00018063001 | |
| 62356 chr11 manual_curation gene 24042574 24043686 . + . ID=GSCOCG00018062001;Name=Cc11_g07360 | |
| 62357 chr11 manual_curation mRNA 24042574 24043686 . + . ID=GSCOCT00018062001;Parent=GSCOCG00018062001;Name=Cc11_g07360 | |
| 62358 chr11 manual_curation polypeptide 24042574 24043686 . + . ID=GSCOCP00018062001;Dbxref=TAIR:AT5G24340.1,TrEMBL:B9IDM6,TrEMBL:B9RPI0,TrEMBL:F6H7B6;Derives_from=GSCOCT00018062001;Name=Cc11_g07360;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:3'-5' CDSuclease domain-containing protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018062001~ 3'-5' CDSuclease domain-containing protein~ unknown_gene~ fragment;original_location=complement(join(672494..672534%2C671964..672345%2C671422..671574));owner=coffea | |
| 62359 chr11 manual_curation exon 24043534 24043686 . + . Parent=GSCOCT00018062001 | |
| 62360 chr11 manual_curation exon 24042763 24043144 . + . Parent=GSCOCT00018062001 | |
| 62361 chr11 manual_curation exon 24042574 24042614 . + . Parent=GSCOCT00018062001 | |
| 62362 chr11 manual_curation CDS 24043534 24043686 . + 0 Parent=GSCOCT00018062001 | |
| 62363 chr11 manual_curation CDS 24042763 24043144 . + 2 Parent=GSCOCT00018062001 | |
| 62364 chr11 manual_curation CDS 24042574 24042614 . + 0 Parent=GSCOCT00018062001 | |
| 62365 chr11 manual_curation gene 24048766 24049185 . - . ID=GSCOCG00018060001;Name=Cc11_g07370 | |
| 62366 chr11 manual_curation mRNA 24048766 24049185 . - . ID=GSCOCT00018060001;Parent=GSCOCG00018060001;Name=Cc11_g07370 | |
| 62367 chr11 manual_curation polypeptide 24048766 24049185 . - . ID=GSCOCP00018060001;Dbxref=InterPro:IPR001279,PFAM:PF00753,SwissProt:Q2YDM2,SwissProt:Q54YL3,SwissProt:Q8GUU3,TAIR:AT2G01730.1,TrEMBL:B9HVV0,TrEMBL:B9SJ31,TrEMBL:F6HFD4;Derives_from=GSCOCT00018060001;Name=Cc11_g07370;Ontology_term=CC_evidence_code:ISS,GO:0016787,CC_EC_number:missing_EC_number,PRODUCT:Cleavage and polyadenylation specificity factor subunit 3-II,CC_functional_completeness:fragment,CC_gene:CPSF73-II,CC_gene:ints11,CC_gene:CPSF3L;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018060001~ Cleavage and polyadenylation specificity factor subunit 3-II~ CPSF73-II~ fragment;original_location=join(665923..665947%2C666140..666342);owner=coffea | |
| 62368 chr11 manual_curation exon 24049161 24049185 . - . Parent=GSCOCT00018060001 | |
| 62369 chr11 manual_curation exon 24048766 24048968 . - . Parent=GSCOCT00018060001 | |
| 62370 chr11 manual_curation CDS 24049161 24049185 . - 0 Parent=GSCOCT00018060001 | |
| 62371 chr11 manual_curation CDS 24048766 24048968 . - 1 Parent=GSCOCT00018060001 | |
| 62372 chr11 manual_curation gene 24050366 24052042 . - . ID=GSCOCG00018059001;Name=Cc11_g07380 | |
| 62373 chr11 manual_curation mRNA 24050366 24052042 . - . ID=GSCOCT00018059001;Parent=GSCOCG00018059001;Name=Cc11_g07380 | |
| 62374 chr11 manual_curation polypeptide 24050366 24052042 . - . ID=GSCOCP00018059001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:P0C894,SwissProt:Q9LQ16,SwissProt:Q9ZUA2,TAIR:AT1G62910.1,TAIR:AT2G01740.1,TAIR:AT2G02150.1,TIGRFAMs:TIGR00756,TrEMBL:B9SJ30,TrEMBL:D7LLV1,TrEMBL:I1Q342;Derives_from=GSCOCT00018059001;Name=Cc11_g07380;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Pentatricopeptide repeat-containing protein At2g01740,CC_functional_completeness:complete,CC_gene:At2g01740,CC_gene:At2g02150,CC_gene:At1g62910;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018059001~ Putative Pentatricopeptide repeat-containing protein At2g01740~ At2g01740~ complete;original_location=663066..664742;owner=coffea | |
| 62375 chr11 manual_curation exon 24050366 24052042 . - . Parent=GSCOCT00018059001 | |
| 62376 chr11 manual_curation CDS 24050366 24052042 . - 0 Parent=GSCOCT00018059001 | |
| 62377 chr11 manual_curation gene 24060657 24067856 . + . ID=GSCOCG00018058001;Name=Cc11_g07390 | |
| 62378 chr11 manual_curation mRNA 24060657 24067856 . + . ID=GSCOCT00018058001;Parent=GSCOCG00018058001;Name=Cc11_g07390 | |
| 62379 chr11 manual_curation polypeptide 24060903 24067314 . + . ID=GSCOCP00018058001;Dbxref=InterPro:IPR009768,PFAM:PF07058,SwissProt:Q8L7S4,SwissProt:Q9C9X0,SwissProt:Q9LQU7,TAIR:AT1G14840.1,TAIR:AT1G24764.1,TAIR:AT1G68060.1,TrEMBL:B9SJ29,TrEMBL:D7T8K7,TrEMBL:I1KQC0;Derives_from=GSCOCT00018058001;Name=Cc11_g07390;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Microtubule-associated protein 70-1,CC_functional_completeness:complete,CC_gene:MAP70.1,CC_gene:MAP70.2,CC_gene:MAP70.4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018058001~ Microtubule-associated protein 70-1~ MAP70.1~ complete;original_location=complement(join(653950..654205%2C653722..653807%2C651431..651496%2C651177..651347%2C650901..651071%2C650638..650793%2C650398..650544%2C650144..650215%2C649529..650059%2C649266..649453%2C647794..647833));owner=coffea | |
| 62380 chr11 manual_curation exon 24067275 24067856 . + . Parent=GSCOCT00018058001 | |
| 62381 chr11 manual_curation exon 24065655 24065842 . + . Parent=GSCOCT00018058001 | |
| 62382 chr11 manual_curation exon 24065049 24065579 . + . Parent=GSCOCT00018058001 | |
| 62383 chr11 manual_curation exon 24064893 24064964 . + . Parent=GSCOCT00018058001 | |
| 62384 chr11 manual_curation exon 24064564 24064710 . + . Parent=GSCOCT00018058001 | |
| 62385 chr11 manual_curation exon 24064315 24064470 . + . Parent=GSCOCT00018058001 | |
| 62386 chr11 manual_curation exon 24064037 24064207 . + . Parent=GSCOCT00018058001 | |
| 62387 chr11 manual_curation exon 24063761 24063931 . + . Parent=GSCOCT00018058001 | |
| 62388 chr11 manual_curation exon 24063612 24063677 . + . Parent=GSCOCT00018058001 | |
| 62389 chr11 manual_curation exon 24061301 24061386 . + . Parent=GSCOCT00018058001 | |
| 62390 chr11 manual_curation exon 24060657 24061158 . + . Parent=GSCOCT00018058001 | |
| 62391 chr11 manual_curation CDS 24067275 24067314 . + 2 Parent=GSCOCT00018058001 | |
| 62392 chr11 manual_curation CDS 24065655 24065842 . + 0 Parent=GSCOCT00018058001 | |
| 62393 chr11 manual_curation CDS 24065049 24065579 . + 0 Parent=GSCOCT00018058001 | |
| 62394 chr11 manual_curation CDS 24064893 24064964 . + 0 Parent=GSCOCT00018058001 | |
| 62395 chr11 manual_curation CDS 24064564 24064710 . + 0 Parent=GSCOCT00018058001 | |
| 62396 chr11 manual_curation CDS 24064315 24064470 . + 0 Parent=GSCOCT00018058001 | |
| 62397 chr11 manual_curation CDS 24064037 24064207 . + 0 Parent=GSCOCT00018058001 | |
| 62398 chr11 manual_curation CDS 24063761 24063931 . + 0 Parent=GSCOCT00018058001 | |
| 62399 chr11 manual_curation CDS 24063612 24063677 . + 0 Parent=GSCOCT00018058001 | |
| 62400 chr11 manual_curation CDS 24061301 24061386 . + 1 Parent=GSCOCT00018058001 | |
| 62401 chr11 manual_curation CDS 24060903 24061158 . + 0 Parent=GSCOCT00018058001 | |
| 62402 chr11 manual_curation gene 24076593 24079609 . + . ID=GSCOCG00018057001;Name=Cc11_g07400 | |
| 62403 chr11 manual_curation mRNA 24076593 24079609 . + . ID=GSCOCT00018057001;Parent=GSCOCG00018057001;Name=Cc11_g07400 | |
| 62404 chr11 manual_curation polypeptide 24076848 24079180 . + . ID=GSCOCP00018057001;Dbxref=InterPro:IPR001104,InterPro:IPR010721,PFAM:PF06966,PROFILE:PS50244,TAIR:AT1G18180.1,TAIR:AT1G73650.3,TAIR:AT2G46890.1,TrEMBL:B9I976,TrEMBL:B9RMZ1,TrEMBL:D7U7G7;Derives_from=GSCOCT00018057001;Name=Cc11_g07400;Ontology_term=CC_evidence_code:ISS,GO:0005737,GO:0006629,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF1295),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018057001~ Protein of unknown function (DUF1295)~ unknown_gene~ complete;original_location=complement(join(638018..638260%2C637571..637843%2C635928..636404));owner=coffea | |
| 62405 chr11 manual_curation exon 24078704 24079609 . + . Parent=GSCOCT00018057001 | |
| 62406 chr11 manual_curation exon 24077265 24077537 . + . Parent=GSCOCT00018057001 | |
| 62407 chr11 manual_curation exon 24076593 24077090 . + . Parent=GSCOCT00018057001 | |
| 62408 chr11 manual_curation CDS 24078704 24079180 . + 0 Parent=GSCOCT00018057001 | |
| 62409 chr11 manual_curation CDS 24077265 24077537 . + 0 Parent=GSCOCT00018057001 | |
| 62410 chr11 manual_curation CDS 24076848 24077090 . + 0 Parent=GSCOCT00018057001 | |
| 62411 chr11 manual_curation gene 24079667 24082361 . + . ID=GSCOCG00018056001;Name=Cc11_g07410 | |
| 62412 chr11 manual_curation mRNA 24079667 24082361 . + . ID=GSCOCT00018056001;Parent=GSCOCG00018056001;Name=Cc11_g07410 | |
| 62413 chr11 manual_curation polypeptide 24079667 24082023 . + . ID=GSCOCP00018056001;Dbxref=InterPro:IPR010721,PFAM:PF06966,TAIR:AT2G46890.1,TrEMBL:B9I976,TrEMBL:B9RMZ1,TrEMBL:G7ZZ33;Derives_from=GSCOCT00018056001;Name=Cc11_g07410;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of unknown function (DUF1295),CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018056001~ Putative Protein of unknown function (DUF1295)~ unknown_gene~ fragment;original_location=complement(join(635412..635441%2C634910..635029%2C634822..634845%2C634537..634755%2C633840..633922%2C633085..633436));owner=coffea | |
| 62414 chr11 manual_curation exon 24081672 24082361 . + . Parent=GSCOCT00018056001 | |
| 62415 chr11 manual_curation exon 24081186 24081268 . + . Parent=GSCOCT00018056001 | |
| 62416 chr11 manual_curation exon 24080353 24080571 . + . Parent=GSCOCT00018056001 | |
| 62417 chr11 manual_curation exon 24080263 24080286 . + . Parent=GSCOCT00018056001 | |
| 62418 chr11 manual_curation exon 24080079 24080198 . + . Parent=GSCOCT00018056001 | |
| 62419 chr11 manual_curation exon 24079667 24079696 . + . Parent=GSCOCT00018056001 | |
| 62420 chr11 manual_curation CDS 24081672 24082023 . + 2 Parent=GSCOCT00018056001 | |
| 62421 chr11 manual_curation CDS 24081186 24081268 . + 0 Parent=GSCOCT00018056001 | |
| 62422 chr11 manual_curation CDS 24080353 24080571 . + 0 Parent=GSCOCT00018056001 | |
| 62423 chr11 manual_curation CDS 24080263 24080286 . + 0 Parent=GSCOCT00018056001 | |
| 62424 chr11 manual_curation CDS 24080079 24080198 . + 0 Parent=GSCOCT00018056001 | |
| 62425 chr11 manual_curation CDS 24079667 24079696 . + 0 Parent=GSCOCT00018056001 | |
| 62426 chr11 manual_curation gene 24083626 24093547 . - . ID=GSCOCG00018055001;Name=Cc11_g07420 | |
| 62427 chr11 manual_curation mRNA 24083626 24093547 . - . ID=GSCOCT00018055001;Parent=GSCOCG00018055001;Name=Cc11_g07420 | |
| 62428 chr11 manual_curation polypeptide 24083626 24093547 . - . ID=GSCOCP00018055001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SMART:SM00369,SwissProt:C0LGQ5,SwissProt:Q9C9H7,SwissProt:Q9FL28,TAIR:AT1G45616.1,TAIR:AT2G15080.1,TAIR:AT2G34930.1,TrEMBL:B9HW18,TrEMBL:F6H3Z2,TrEMBL:F6H9K0;Derives_from=GSCOCT00018055001;Name=Cc11_g07420;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:3.1.3.16,PRODUCT:Putative LRR receptor-like serine/threonine-protein kinase GSO1,CC_functional_completeness:complete,CC_gene:GSO1,CC_gene:FLS2,CC_gene:RLP12;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018055001~ Putative LRR receptor-like serine/threonine-protein kinase GSO1~ GSO1~ complete;original_location=join(621561..622691%2C622779..624040%2C628500..628551%2C630820..631482);owner=coffea | |
| 62429 chr11 manual_curation exon 24092417 24093547 . - . Parent=GSCOCT00018055001 | |
| 62430 chr11 manual_curation exon 24091068 24092329 . - . Parent=GSCOCT00018055001 | |
| 62431 chr11 manual_curation exon 24086557 24086608 . - . Parent=GSCOCT00018055001 | |
| 62432 chr11 manual_curation exon 24083626 24084288 . - . Parent=GSCOCT00018055001 | |
| 62433 chr11 manual_curation CDS 24092417 24093547 . - 0 Parent=GSCOCT00018055001 | |
| 62434 chr11 manual_curation CDS 24091068 24092329 . - 0 Parent=GSCOCT00018055001 | |
| 62435 chr11 manual_curation CDS 24086557 24086608 . - 2 Parent=GSCOCT00018055001 | |
| 62436 chr11 manual_curation CDS 24083626 24084288 . - 0 Parent=GSCOCT00018055001 | |
| 62437 chr11 manual_curation gene 24094765 24100544 . - . ID=GSCOCG00018054001;Name=Cc11_g07430 | |
| 62438 chr11 manual_curation mRNA 24094765 24100544 . - . ID=GSCOCT00018054001;Parent=GSCOCG00018054001;Name=Cc11_g07430 | |
| 62439 chr11 manual_curation polypeptide 24094765 24100544 . - . ID=GSCOCP00018054001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,PFAM:PF00560,SMART:SM00369,SwissProt:O49318,SwissProt:Q9FIZ3,SwissProt:Q9SHI2,TAIR:AT2G33170.1,TAIR:AT2G34930.1,TAIR:AT5G44700.1,TrEMBL:F6H3Z2,TrEMBL:G7L671,TrEMBL:G8Z973;Derives_from=GSCOCT00018054001;Name=Cc11_g07430;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:3.1.3.16,PRODUCT:Putative LRR receptor-like serine/threonine-protein kinase GSO2,CC_functional_completeness:complete,CC_gene:GSO2,CC_gene:At2g33170,CC_gene:At1g17230;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018054001~ Putative LRR receptor-like serine/threonine-protein kinase GSO2~ GSO2~ complete;original_location=join(614564..614932%2C617823..617897%2C618047..618483%2C618548..618746%2C618975..619349%2C619480..619678%2C619781..620046%2C620206..620343);owner=coffea | |
| 62440 chr11 manual_curation exon 24100176 24100544 . - . Parent=GSCOCT00018054001 | |
| 62441 chr11 manual_curation exon 24097211 24097285 . - . Parent=GSCOCT00018054001 | |
| 62442 chr11 manual_curation exon 24096625 24097061 . - . Parent=GSCOCT00018054001 | |
| 62443 chr11 manual_curation exon 24096362 24096560 . - . Parent=GSCOCT00018054001 | |
| 62444 chr11 manual_curation exon 24095759 24096133 . - . Parent=GSCOCT00018054001 | |
| 62445 chr11 manual_curation exon 24095430 24095628 . - . Parent=GSCOCT00018054001 | |
| 62446 chr11 manual_curation exon 24095062 24095327 . - . Parent=GSCOCT00018054001 | |
| 62447 chr11 manual_curation exon 24094765 24094902 . - . Parent=GSCOCT00018054001 | |
| 62448 chr11 manual_curation CDS 24100176 24100544 . - 0 Parent=GSCOCT00018054001 | |
| 62449 chr11 manual_curation CDS 24097211 24097285 . - 0 Parent=GSCOCT00018054001 | |
| 62450 chr11 manual_curation CDS 24096625 24097061 . - 0 Parent=GSCOCT00018054001 | |
| 62451 chr11 manual_curation CDS 24096362 24096560 . - 2 Parent=GSCOCT00018054001 | |
| 62452 chr11 manual_curation CDS 24095759 24096133 . - 0 Parent=GSCOCT00018054001 | |
| 62453 chr11 manual_curation CDS 24095430 24095628 . - 0 Parent=GSCOCT00018054001 | |
| 62454 chr11 manual_curation CDS 24095062 24095327 . - 1 Parent=GSCOCT00018054001 | |
| 62455 chr11 manual_curation CDS 24094765 24094902 . - 0 Parent=GSCOCT00018054001 | |
| 62456 chr11 manual_curation gene 24101290 24104601 . - . ID=GSCOCG00018053001;Name=Cc11_g07440 | |
| 62457 chr11 manual_curation mRNA 24101290 24104601 . - . ID=GSCOCT00018053001;Parent=GSCOCG00018053001;Name=Cc11_g07440 | |
| 62458 chr11 manual_curation polypeptide 24101290 24104601 . - . ID=GSCOCP00018053001;Dbxref=InterPro:IPR000873,PFAM:PF00501,SwissProt:A0LG91,SwissProt:B9DGD6,SwissProt:O68040,TAIR:AT3G16170.1,TAIR:AT3G48990.1,TAIR:AT5G36880.2,TrEMBL:B7ZWU2,TrEMBL:B8AIR3,TrEMBL:C5XTB7,TrEMBL:I1P0V5,TrEMBL:Q6H798;Derives_from=GSCOCT00018053001;Name=Cc11_g07440;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,CC_EC_number:6.2.1.1,PRODUCT:Acetate--CoA ligase ACS%2C chloroplastic/glyoxysomal,CC_functional_completeness:fragment,CC_gene:ACS,CC_gene:acsA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018053001~ Acetate--CoA ligase ACS%2C chloroplastic/glyoxysomal~ ACS~ fragment;original_location=join(610507..610611%2C611907..612082%2C612215..612271%2C612437..612527%2C612615..612713%2C613633..613818);owner=coffea | |
| 62459 chr11 manual_curation exon 24104497 24104601 . - . Parent=GSCOCT00018053001 | |
| 62460 chr11 manual_curation exon 24103026 24103201 . - . Parent=GSCOCT00018053001 | |
| 62461 chr11 manual_curation exon 24102837 24102893 . - . Parent=GSCOCT00018053001 | |
| 62462 chr11 manual_curation exon 24102581 24102671 . - . Parent=GSCOCT00018053001 | |
| 62463 chr11 manual_curation exon 24102395 24102493 . - . Parent=GSCOCT00018053001 | |
| 62464 chr11 manual_curation exon 24101290 24101475 . - . Parent=GSCOCT00018053001 | |
| 62465 chr11 manual_curation CDS 24104497 24104601 . - 0 Parent=GSCOCT00018053001 | |
| 62466 chr11 manual_curation CDS 24103026 24103201 . - 0 Parent=GSCOCT00018053001 | |
| 62467 chr11 manual_curation CDS 24102837 24102893 . - 2 Parent=GSCOCT00018053001 | |
| 62468 chr11 manual_curation CDS 24102581 24102671 . - 2 Parent=GSCOCT00018053001 | |
| 62469 chr11 manual_curation CDS 24102395 24102493 . - 0 Parent=GSCOCT00018053001 | |
| 62470 chr11 manual_curation CDS 24101290 24101475 . - 0 Parent=GSCOCT00018053001 | |
| 62471 chr11 manual_curation gene 24104657 24109977 . - . ID=GSCOCG00018052001;Name=Cc11_g07450 | |
| 62472 chr11 manual_curation mRNA 24104657 24109977 . - . ID=GSCOCT00018052001;Parent=GSCOCG00018052001;Name=Cc11_g07450 | |
| 62473 chr11 manual_curation polypeptide 24104657 24109977 . - . ID=GSCOCP00018052001;Dbxref=InterPro:IPR000873,InterPro:IPR020845,PFAM:PF00501,PROSITE:PS00455,SwissProt:B9DGD6,SwissProt:Q9NR19,SwissProt:Q9QXG4,TAIR:AT1G55320.1,TAIR:AT5G23050.1,TAIR:AT5G36880.2,TrEMBL:B9RGS6,TrEMBL:D7SVD4,TrEMBL:H9A8L4;Derives_from=GSCOCT00018052001;Name=Cc11_g07450;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,CC_EC_number:6.2.1.1,PRODUCT:Acetate--CoA ligase ACS%2C chloroplastic/glyoxysomal,CC_functional_completeness:fragment,CC_gene:ACS,CC_gene:Acss2,CC_gene:ACSS2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018052001~ Acetate--CoA ligase ACS%2C chloroplastic/glyoxysomal~ ACS~ fragment;original_location=join(605131..605355%2C605950..606093%2C606796..606951%2C607050..607172%2C607300..607468%2C607723..607805%2C608142..608243%2C608326..608414%2C608500..608590%2C609479..609619%2C610189..610265%2C610361..610451);owner=coffea | |
| 62474 chr11 manual_curation exon 24109753 24109977 . - . Parent=GSCOCT00018052001 | |
| 62475 chr11 manual_curation exon 24109015 24109158 . - . Parent=GSCOCT00018052001 | |
| 62476 chr11 manual_curation exon 24108157 24108312 . - . Parent=GSCOCT00018052001 | |
| 62477 chr11 manual_curation exon 24107936 24108058 . - . Parent=GSCOCT00018052001 | |
| 62478 chr11 manual_curation exon 24107640 24107808 . - . Parent=GSCOCT00018052001 | |
| 62479 chr11 manual_curation exon 24107303 24107385 . - . Parent=GSCOCT00018052001 | |
| 62480 chr11 manual_curation exon 24106865 24106966 . - . Parent=GSCOCT00018052001 | |
| 62481 chr11 manual_curation exon 24106694 24106782 . - . Parent=GSCOCT00018052001 | |
| 62482 chr11 manual_curation exon 24106518 24106608 . - . Parent=GSCOCT00018052001 | |
| 62483 chr11 manual_curation exon 24105489 24105629 . - . Parent=GSCOCT00018052001 | |
| 62484 chr11 manual_curation exon 24104843 24104919 . - . Parent=GSCOCT00018052001 | |
| 62485 chr11 manual_curation exon 24104657 24104747 . - . Parent=GSCOCT00018052001 | |
| 62486 chr11 manual_curation CDS 24109753 24109977 . - 0 Parent=GSCOCT00018052001 | |
| 62487 chr11 manual_curation CDS 24109015 24109158 . - 0 Parent=GSCOCT00018052001 | |
| 62488 chr11 manual_curation CDS 24108157 24108312 . - 0 Parent=GSCOCT00018052001 | |
| 62489 chr11 manual_curation CDS 24107936 24108058 . - 0 Parent=GSCOCT00018052001 | |
| 62490 chr11 manual_curation CDS 24107640 24107808 . - 0 Parent=GSCOCT00018052001 | |
| 62491 chr11 manual_curation CDS 24107303 24107385 . - 1 Parent=GSCOCT00018052001 | |
| 62492 chr11 manual_curation CDS 24106865 24106966 . - 0 Parent=GSCOCT00018052001 | |
| 62493 chr11 manual_curation CDS 24106694 24106782 . - 0 Parent=GSCOCT00018052001 | |
| 62494 chr11 manual_curation CDS 24106518 24106608 . - 2 Parent=GSCOCT00018052001 | |
| 62495 chr11 manual_curation CDS 24105489 24105629 . - 0 Parent=GSCOCT00018052001 | |
| 62496 chr11 manual_curation CDS 24104843 24104919 . - 0 Parent=GSCOCT00018052001 | |
| 62497 chr11 manual_curation CDS 24104657 24104747 . - 2 Parent=GSCOCT00018052001 | |
| 62498 chr11 manual_curation gene 24112861 24114526 . - . ID=GSCOCG00018051001;Name=Cc11_g07460 | |
| 62499 chr11 manual_curation mRNA 24112861 24114526 . - . ID=GSCOCT00018051001;Parent=GSCOCG00018051001;Name=Cc11_g07460 | |
| 62500 chr11 manual_curation polypeptide 24112861 24114526 . - . ID=GSCOCP00018051001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,PFAM:PF00560,SMART:SM00369,SwissProt:Q9FIZ3,SwissProt:Q9FRS6,SwissProt:Q9SHI2,TAIR:AT1G08590.1,TAIR:AT3G56370.1,TAIR:AT5G44700.1,TrEMBL:C5YG40,TrEMBL:G7ITB2,TrEMBL:I1I4K3;Derives_from=GSCOCT00018051001;Name=Cc11_g07460;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative Leucine-rich repeat receptor-like protein kinase PXL1,CC_functional_completeness:complete,CC_gene:PXL1,CC_gene:GSO2,CC_gene:At1g17230;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018051001~ Putative Leucine-rich repeat receptor-like protein kinase PXL1~ PXL1~ complete;original_location=join(600582..600966%2C601167..601454%2C601521..601808%2C601871..602247);owner=coffea | |
| 62501 chr11 manual_curation exon 24114142 24114526 . - . Parent=GSCOCT00018051001 | |
| 62502 chr11 manual_curation exon 24113654 24113941 . - . Parent=GSCOCT00018051001 | |
| 62503 chr11 manual_curation exon 24113300 24113587 . - . Parent=GSCOCT00018051001 | |
| 62504 chr11 manual_curation exon 24112861 24113237 . - . Parent=GSCOCT00018051001 | |
| 62505 chr11 manual_curation CDS 24114142 24114526 . - 0 Parent=GSCOCT00018051001 | |
| 62506 chr11 manual_curation CDS 24113654 24113941 . - 1 Parent=GSCOCT00018051001 | |
| 62507 chr11 manual_curation CDS 24113300 24113587 . - 1 Parent=GSCOCT00018051001 | |
| 62508 chr11 manual_curation CDS 24112861 24113237 . - 1 Parent=GSCOCT00018051001 | |
| 62509 chr11 manual_curation gene 24118095 24121202 . + . ID=GSCOCG00018050001;Name=Cc11_g07470 | |
| 62510 chr11 manual_curation mRNA 24118095 24121202 . + . ID=GSCOCT00018050001;Parent=GSCOCG00018050001;Name=Cc11_g07470 | |
| 62511 chr11 manual_curation polypeptide 24118095 24120655 . + . ID=GSCOCP00018050001;Dbxref=GENE3D:G3DSA:3.90.470.10,InterPro:IPR001063,InterPro:IPR005721,InterPro:IPR018260,PANTHER:PTHR11593,PFAM:PF00237,PROSITE:PS00464,SUPERFAMILY:SSF54843,SwissProt:O48557,TIGRFAMs:TIGR01038,TrEMBL:D7TAV6;Derives_from=GSCOCT00018050001;Name=Cc11_g07470;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,GO:0015934,CC_EC_number:missing_EC_number,PRODUCT:60S ribosomal protein L17,CC_functional_completeness:complete,CC_gene:RPL17B,CC_gene:RPL17A,CC_gene:RPL17;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018050001~ 60S ribosomal protein L17~ RPL17B~ complete;original_location=complement(join(596923..597013%2C596856..596866%2C596663..596699%2C596473..596513%2C594917..595147%2C594735..594837%2C594584..594651%2C594453..594494));owner=coffea | |
| 62512 chr11 manual_curation exon 24120614 24121202 . + . Parent=GSCOCT00018050001 | |
| 62513 chr11 manual_curation exon 24120457 24120524 . + . Parent=GSCOCT00018050001 | |
| 62514 chr11 manual_curation exon 24120271 24120373 . + . Parent=GSCOCT00018050001 | |
| 62515 chr11 manual_curation exon 24119961 24120191 . + . Parent=GSCOCT00018050001 | |
| 62516 chr11 manual_curation exon 24118595 24118635 . + . Parent=GSCOCT00018050001 | |
| 62517 chr11 manual_curation exon 24118409 24118445 . + . Parent=GSCOCT00018050001 | |
| 62518 chr11 manual_curation exon 24118242 24118252 . + . Parent=GSCOCT00018050001 | |
| 62519 chr11 manual_curation exon 24118095 24118185 . + . Parent=GSCOCT00018050001 | |
| 62520 chr11 manual_curation CDS 24120614 24120655 . + 0 Parent=GSCOCT00018050001 | |
| 62521 chr11 manual_curation CDS 24120457 24120524 . + 1 Parent=GSCOCT00018050001 | |
| 62522 chr11 manual_curation CDS 24120271 24120373 . + 0 Parent=GSCOCT00018050001 | |
| 62523 chr11 manual_curation CDS 24119961 24120191 . + 0 Parent=GSCOCT00018050001 | |
| 62524 chr11 manual_curation CDS 24118595 24118635 . + 1 Parent=GSCOCT00018050001 | |
| 62525 chr11 manual_curation CDS 24118409 24118445 . + 0 Parent=GSCOCT00018050001 | |
| 62526 chr11 manual_curation CDS 24118242 24118252 . + 1 Parent=GSCOCT00018050001 | |
| 62527 chr11 manual_curation CDS 24118095 24118185 . + 0 Parent=GSCOCT00018050001 | |
| 62528 chr11 manual_curation gene 24121780 24124701 . - . ID=GSCOCG00018049001;Name=Cc11_g07480 | |
| 62529 chr11 manual_curation mRNA 24121780 24124701 . - . ID=GSCOCT00018049001;Parent=GSCOCG00018049001;Name=Cc11_g07480 | |
| 62530 chr11 manual_curation polypeptide 24121780 24124701 . - . ID=GSCOCP00018049001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SMART:SM00369,SwissProt:C0LGQ5,SwissProt:Q9C9H7,SwissProt:Q9LVP0,TAIR:AT2G34930.1,TAIR:AT3G05650.1,TAIR:AT3G05660.1,TrEMBL:B9HW18,TrEMBL:F6H6P5,TrEMBL:F6H9K2;Derives_from=GSCOCT00018049001;Name=Cc11_g07480;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:3.1.3.16,PRODUCT:Putative Receptor-like protein 12,CC_functional_completeness:complete,CC_gene:RLP12,CC_gene:GSO1,CC_gene:At5g63930;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018049001~ Putative Receptor-like protein 12~ RLP12~ complete;original_location=join(590407..591011%2C591204..591904%2C592052..593328);owner=coffea | |
| 62531 chr11 manual_curation exon 24124097 24124701 . - . Parent=GSCOCT00018049001 | |
| 62532 chr11 manual_curation exon 24123204 24123904 . - . Parent=GSCOCT00018049001 | |
| 62533 chr11 manual_curation exon 24121780 24123056 . - . Parent=GSCOCT00018049001 | |
| 62534 chr11 manual_curation CDS 24124097 24124701 . - 0 Parent=GSCOCT00018049001 | |
| 62535 chr11 manual_curation CDS 24123204 24123904 . - 2 Parent=GSCOCT00018049001 | |
| 62536 chr11 manual_curation CDS 24121780 24123056 . - 1 Parent=GSCOCT00018049001 | |
| 62537 chr11 manual_curation gene 24142079 24145913 . - . ID=GSCOCG00018048001;Name=Cc11_g07490 | |
| 62538 chr11 manual_curation mRNA 24142079 24145913 . - . ID=GSCOCT00018048001;Parent=GSCOCG00018048001;Name=Cc11_g07490 | |
| 62539 chr11 manual_curation polypeptide 24142079 24145913 . - . ID=GSCOCP00018048001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SMART:SM00369,SwissProt:C0LGQ5,SwissProt:Q9FIZ3,SwissProt:Q9LYN8,TAIR:AT2G34930.1,TAIR:AT4G13920.1,TAIR:AT5G27060.1,TrEMBL:B9HW18,TrEMBL:F6I5J3,TrEMBL:G5CBT7;Derives_from=GSCOCT00018048001;Name=Cc11_g07490;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative Leucine-rich repeat receptor protein kinase EXS,CC_functional_completeness:complete,CC_gene:EXS,CC_gene:GSO1,CC_gene:GSO2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018048001~ Putative Leucine-rich repeat receptor protein kinase EXS~ EXS~ complete;original_location=join(569195..569465%2C569532..570837%2C570925..571946%2C572396..572663%2C572747..573029);owner=coffea | |
| 62540 chr11 manual_curation exon 24145643 24145913 . - . Parent=GSCOCT00018048001 | |
| 62541 chr11 manual_curation exon 24144271 24145576 . - . Parent=GSCOCT00018048001 | |
| 62542 chr11 manual_curation exon 24143162 24144183 . - . Parent=GSCOCT00018048001 | |
| 62543 chr11 manual_curation exon 24142445 24142712 . - . Parent=GSCOCT00018048001 | |
| 62544 chr11 manual_curation exon 24142079 24142361 . - . Parent=GSCOCT00018048001 | |
| 62545 chr11 manual_curation CDS 24145643 24145913 . - 0 Parent=GSCOCT00018048001 | |
| 62546 chr11 manual_curation CDS 24144271 24145576 . - 1 Parent=GSCOCT00018048001 | |
| 62547 chr11 manual_curation CDS 24143162 24144183 . - 2 Parent=GSCOCT00018048001 | |
| 62548 chr11 manual_curation CDS 24142445 24142712 . - 1 Parent=GSCOCT00018048001 | |
| 62549 chr11 manual_curation CDS 24142079 24142361 . - 2 Parent=GSCOCT00018048001 | |
| 62550 chr11 manual_curation gene 24265811 24266768 . + . ID=GSCOCG00018047001;Name=Cc11_g07500 | |
| 62551 chr11 manual_curation mRNA 24265811 24266768 . + . ID=GSCOCT00018047001;Parent=GSCOCG00018047001;Name=Cc11_g07500 | |
| 62552 chr11 manual_curation polypeptide 24265811 24266596 . + . ID=GSCOCP00018047001;Dbxref=InterPro:IPR005721,PANTHER:PTHR11593,SwissProt:P51413,SwissProt:Q93VI3,TAIR:AT1G27400.1,TAIR:AT1G67430.1,TrEMBL:A5B412,TrEMBL:B6VC48,TrEMBL:D7TAV6;Derives_from=GSCOCT00018047001;Name=Cc11_g07500;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0006412,GO:0015934,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:RPL17B,CC_gene:RPL17A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018047001~ Hypothetical protein~ RPL17B~ missing_functional_completeness;original_location=complement(join(449267..449297%2C448795..448884%2C448644..448711%2C448512..448553));owner=coffea | |
| 62553 chr11 manual_curation exon 24266555 24266768 . + . Parent=GSCOCT00018047001 | |
| 62554 chr11 manual_curation exon 24266397 24266464 . + . Parent=GSCOCT00018047001 | |
| 62555 chr11 manual_curation exon 24266224 24266313 . + . Parent=GSCOCT00018047001 | |
| 62556 chr11 manual_curation exon 24265811 24265841 . + . Parent=GSCOCT00018047001 | |
| 62557 chr11 manual_curation CDS 24266555 24266596 . + 0 Parent=GSCOCT00018047001 | |
| 62558 chr11 manual_curation CDS 24266397 24266464 . + 1 Parent=GSCOCT00018047001 | |
| 62559 chr11 manual_curation CDS 24266224 24266313 . + 1 Parent=GSCOCT00018047001 | |
| 62560 chr11 manual_curation CDS 24265811 24265841 . + 0 Parent=GSCOCT00018047001 | |
| 62561 chr11 manual_curation gene 24267579 24270681 . - . ID=GSCOCG00018046001;Name=Cc11_g07510 | |
| 62562 chr11 manual_curation mRNA 24267579 24270681 . - . ID=GSCOCT00018046001;Parent=GSCOCG00018046001;Name=Cc11_g07510 | |
| 62563 chr11 manual_curation polypeptide 24267579 24270681 . - . ID=GSCOCP00018046001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SMART:SM00369,SwissProt:C0LGQ5,SwissProt:Q9FIZ3,SwissProt:Q9FL28,TAIR:AT2G34930.1,TAIR:AT3G05660.1,TAIR:AT5G27060.1,TrEMBL:B9HW18,TrEMBL:F6H3Z2,TrEMBL:F6H9K2;Derives_from=GSCOCT00018046001;Name=Cc11_g07510;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:3.1.3.16,PRODUCT:Putative LRR receptor-like serine/threonine-protein kinase GSO1,CC_functional_completeness:fragment,CC_gene:GSO1,CC_gene:FLS2,CC_gene:GSO2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018046001~ Putative LRR receptor-like serine/threonine-protein kinase GSO1~ GSO1~ fragment;original_location=join(444427..444446%2C444523..445127%2C445236..446734%2C447023..447529);owner=coffea | |
| 62564 chr11 manual_curation exon 24270662 24270681 . - . Parent=GSCOCT00018046001 | |
| 62565 chr11 manual_curation exon 24269981 24270585 . - . Parent=GSCOCT00018046001 | |
| 62566 chr11 manual_curation exon 24268374 24269872 . - . Parent=GSCOCT00018046001 | |
| 62567 chr11 manual_curation exon 24267579 24268085 . - . Parent=GSCOCT00018046001 | |
| 62568 chr11 manual_curation CDS 24270662 24270681 . - 0 Parent=GSCOCT00018046001 | |
| 62569 chr11 manual_curation CDS 24269981 24270585 . - 2 Parent=GSCOCT00018046001 | |
| 62570 chr11 manual_curation CDS 24268374 24269872 . - 1 Parent=GSCOCT00018046001 | |
| 62571 chr11 manual_curation CDS 24267579 24268085 . - 0 Parent=GSCOCT00018046001 | |
| 62572 chr11 manual_curation gene 24319573 24321299 . - . ID=GSCOCG00018045001;Name=Cc11_g07520 | |
| 62573 chr11 manual_curation mRNA 24319573 24321299 . - . ID=GSCOCT00018045001;Parent=GSCOCG00018045001;Name=Cc11_g07520 | |
| 62574 chr11 manual_curation polypeptide 24319573 24321299 . - . ID=GSCOCP00018045001;Dbxref=GENE3D:G3DSA:1.25.40.20,InterPro:IPR002110,InterPro:IPR020683,PFAM:PF00023,PROFILE:PS50088,PROFILE:PS50297,SMART:SM00248,SUPERFAMILY:SSF48403,SwissProt:Q6AWW5,SwissProt:Q6GNY1,SwissProt:Q9C7A2,TAIR:AT1G03670.1,TAIR:AT4G03500.1,TAIR:AT5G02620.1,TrEMBL:B9N266,TrEMBL:B9N283,TrEMBL:B9T576;Derives_from=GSCOCT00018045001;Name=Cc11_g07520;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Ankyrin repeat-containing protein At5g02620,CC_functional_completeness:fragment,CC_gene:At5g02620,CC_gene:mib1,CC_gene:At3g12360;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018045001~ Putative Ankyrin repeat-containing protein At5g02620~ At5g02620~ fragment;original_location=join(393809..394400%2C395258..395535);owner=coffea | |
| 62575 chr11 manual_curation exon 24320708 24321299 . - . Parent=GSCOCT00018045001 | |
| 62576 chr11 manual_curation exon 24319573 24319850 . - . Parent=GSCOCT00018045001 | |
| 62577 chr11 manual_curation CDS 24320708 24321299 . - 0 Parent=GSCOCT00018045001 | |
| 62578 chr11 manual_curation CDS 24319573 24319850 . - 1 Parent=GSCOCT00018045001 | |
| 62579 chr11 manual_curation gene 24331621 24334536 . - . ID=GSCOCG00018044001;Name=Cc11_g07530 | |
| 62580 chr11 manual_curation mRNA 24331621 24334536 . - . ID=GSCOCT00018044001;Parent=GSCOCG00018044001;Name=Cc11_g07530 | |
| 62581 chr11 manual_curation polypeptide 24331621 24334536 . - . ID=GSCOCP00018044001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SMART:SM00369,SwissProt:C0LGQ5,SwissProt:Q9C9H7,SwissProt:Q9FL28,TAIR:AT2G34930.1,TAIR:AT3G05660.1,TAIR:AT5G27060.1,TrEMBL:B9GFB5,TrEMBL:B9HW18,TrEMBL:F6H9K2;Derives_from=GSCOCT00018044001;Name=Cc11_g07530;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:3.1.3.16,PRODUCT:Putative LRR receptor-like serine/threonine-protein kinase GSO1,CC_functional_completeness:fragment,CC_gene:GSO1,CC_gene:RLP12,CC_gene:FLS2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018044001~ Putative LRR receptor-like serine/threonine-protein kinase GSO1~ GSO1~ fragment;original_location=join(380572..381109%2C381254..382132%2C382205..383487);owner=coffea | |
| 62582 chr11 manual_curation exon 24333999 24334536 . - . Parent=GSCOCT00018044001 | |
| 62583 chr11 manual_curation exon 24332976 24333854 . - . Parent=GSCOCT00018044001 | |
| 62584 chr11 manual_curation exon 24331621 24332903 . - . Parent=GSCOCT00018044001 | |
| 62585 chr11 manual_curation CDS 24333999 24334536 . - 0 Parent=GSCOCT00018044001 | |
| 62586 chr11 manual_curation CDS 24332976 24333854 . - 1 Parent=GSCOCT00018044001 | |
| 62587 chr11 manual_curation CDS 24331621 24332903 . - 1 Parent=GSCOCT00018044001 | |
| 62588 chr11 manual_curation gene 24345471 24347869 . + . ID=GSCOCG00018043001;Name=Cc11_g07540 | |
| 62589 chr11 manual_curation mRNA 24345471 24347869 . + . ID=GSCOCT00018043001;Parent=GSCOCG00018043001;Name=Cc11_g07540 | |
| 62590 chr11 manual_curation polypeptide 24345471 24347869 . + . ID=GSCOCP00018043001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00463,SUPERFAMILY:SSF48264,SwissProt:Q50EK0,SwissProt:Q50EK1,SwissProt:Q6WG30,TAIR:AT3G19270.1,TAIR:AT5G36110.1,TAIR:AT5G36140.1,TrEMBL:F4YF71,TrEMBL:H2DH15,TrEMBL:H2DH16;Derives_from=GSCOCT00018043001;Name=Cc11_g07540;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.76,PRODUCT:Putative Cytochrome P450 716B2,CC_functional_completeness:fragment,CC_gene:CYP716B2,CC_gene:CYP716B1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018043001~ Putative Cytochrome P450 716B2~ CYP716B2~ fragment;original_location=complement(join(369189..369637%2C368703..369070%2C368119..368132%2C367950..368018%2C367239..367361));owner=coffea | |
| 62591 chr11 manual_curation exon 24347747 24347869 . + . Parent=GSCOCT00018043001 | |
| 62592 chr11 manual_curation exon 24347090 24347158 . + . Parent=GSCOCT00018043001 | |
| 62593 chr11 manual_curation exon 24346976 24346989 . + . Parent=GSCOCT00018043001 | |
| 62594 chr11 manual_curation exon 24346038 24346405 . + . Parent=GSCOCT00018043001 | |
| 62595 chr11 manual_curation exon 24345471 24345919 . + . Parent=GSCOCT00018043001 | |
| 62596 chr11 manual_curation CDS 24347747 24347869 . + 0 Parent=GSCOCT00018043001 | |
| 62597 chr11 manual_curation CDS 24347090 24347158 . + 0 Parent=GSCOCT00018043001 | |
| 62598 chr11 manual_curation CDS 24346976 24346989 . + 1 Parent=GSCOCT00018043001 | |
| 62599 chr11 manual_curation CDS 24346038 24346405 . + 2 Parent=GSCOCT00018043001 | |
| 62600 chr11 manual_curation CDS 24345471 24345919 . + 0 Parent=GSCOCT00018043001 | |
| 62601 chr11 manual_curation gene 24351483 24361135 . + . ID=GSCOCG00018042001;Name=Cc11_g07550 | |
| 62602 chr11 manual_curation mRNA 24351483 24361135 . + . ID=GSCOCT00018042001;Parent=GSCOCG00018042001;Name=Cc11_g07550 | |
| 62603 chr11 manual_curation polypeptide 24351483 24361031 . + . ID=GSCOCP00018042001;Dbxref=InterPro:IPR000375,InterPro:IPR001401,InterPro:IPR003130,InterPro:IPR019762,InterPro:IPR020850,InterPro:IPR022812,PFAM:PF00350,PFAM:PF01031,PFAM:PF02212,PRINTS:PR00195,PROFILE:PS51388,PROSITE:PS00410,SMART:SM00053,SMART:SM00302,SwissProt:Q8LF21,SwissProt:Q8S3C9,SwissProt:Q9FNX5,TAIR:AT1G14830.1,TAIR:AT2G44590.3,TAIR:AT3G60190.1,TrEMBL:B9HVU8,TrEMBL:B9T4N0,TrEMBL:E5GB64;Derives_from=GSCOCT00018042001;Name=Cc11_g07550;Ontology_term=CC_evidence_code:ISS,GO:0003924,GO:0005525,CC_EC_number:missing_EC_number,PRODUCT:Dynamin-related protein 1C,CC_functional_completeness:complete,CC_gene:DRP1C,CC_gene:DRP1E,CC_gene:DRP1D;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018042001~ Dynamin-related protein 1C~ DRP1C~ complete;original_location=complement(join(363488..363625%2C363294..363357%2C362665..362769%2C361354..361455%2C360488..360538%2C360322..360383%2C359353..359443%2C359131..359195%2C358763..358957%2C358545..358664%2C358381..358451%2C357113..357338%2C356699..356749%2C355451..355700%2C354341..354480%2C354077..354202));owner=coffea | |
| 62604 chr11 manual_curation exon 24360906 24361135 . + . Parent=GSCOCT00018042001 | |
| 62605 chr11 manual_curation exon 24360628 24360767 . + . Parent=GSCOCT00018042001 | |
| 62606 chr11 manual_curation exon 24359408 24359657 . + . Parent=GSCOCT00018042001 | |
| 62607 chr11 manual_curation exon 24358359 24358409 . + . Parent=GSCOCT00018042001 | |
| 62608 chr11 manual_curation exon 24357770 24357995 . + . Parent=GSCOCT00018042001 | |
| 62609 chr11 manual_curation exon 24356657 24356727 . + . Parent=GSCOCT00018042001 | |
| 62610 chr11 manual_curation exon 24356444 24356563 . + . Parent=GSCOCT00018042001 | |
| 62611 chr11 manual_curation exon 24356151 24356345 . + . Parent=GSCOCT00018042001 | |
| 62612 chr11 manual_curation exon 24355913 24355977 . + . Parent=GSCOCT00018042001 | |
| 62613 chr11 manual_curation exon 24355665 24355755 . + . Parent=GSCOCT00018042001 | |
| 62614 chr11 manual_curation exon 24354725 24354786 . + . Parent=GSCOCT00018042001 | |
| 62615 chr11 manual_curation exon 24354570 24354620 . + . Parent=GSCOCT00018042001 | |
| 62616 chr11 manual_curation exon 24353653 24353754 . + . Parent=GSCOCT00018042001 | |
| 62617 chr11 manual_curation exon 24352339 24352443 . + . Parent=GSCOCT00018042001 | |
| 62618 chr11 manual_curation exon 24351751 24351814 . + . Parent=GSCOCT00018042001 | |
| 62619 chr11 manual_curation exon 24351483 24351620 . + . Parent=GSCOCT00018042001 | |
| 62620 chr11 manual_curation CDS 24360906 24361031 . + 0 Parent=GSCOCT00018042001 | |
| 62621 chr11 manual_curation CDS 24360628 24360767 . + 1 Parent=GSCOCT00018042001 | |
| 62622 chr11 manual_curation CDS 24359408 24359657 . + 0 Parent=GSCOCT00018042001 | |
| 62623 chr11 manual_curation CDS 24358359 24358409 . + 0 Parent=GSCOCT00018042001 | |
| 62624 chr11 manual_curation CDS 24357770 24357995 . + 2 Parent=GSCOCT00018042001 | |
| 62625 chr11 manual_curation CDS 24356657 24356727 . + 0 Parent=GSCOCT00018042001 | |
| 62626 chr11 manual_curation CDS 24356444 24356563 . + 0 Parent=GSCOCT00018042001 | |
| 62627 chr11 manual_curation CDS 24356151 24356345 . + 0 Parent=GSCOCT00018042001 | |
| 62628 chr11 manual_curation CDS 24355913 24355977 . + 1 Parent=GSCOCT00018042001 | |
| 62629 chr11 manual_curation CDS 24355665 24355755 . + 0 Parent=GSCOCT00018042001 | |
| 62630 chr11 manual_curation CDS 24354725 24354786 . + 1 Parent=GSCOCT00018042001 | |
| 62631 chr11 manual_curation CDS 24354570 24354620 . + 1 Parent=GSCOCT00018042001 | |
| 62632 chr11 manual_curation CDS 24353653 24353754 . + 1 Parent=GSCOCT00018042001 | |
| 62633 chr11 manual_curation CDS 24352339 24352443 . + 1 Parent=GSCOCT00018042001 | |
| 62634 chr11 manual_curation CDS 24351751 24351814 . + 0 Parent=GSCOCT00018042001 | |
| 62635 chr11 manual_curation CDS 24351483 24351620 . + 0 Parent=GSCOCT00018042001 | |
| 62636 chr11 manual_curation gene 24364427 24368323 . + . ID=GSCOCG00018040001;Name=Cc11_g07560 | |
| 62637 chr11 manual_curation mRNA 24364427 24368323 . + . ID=GSCOCT00018040001;Parent=GSCOCG00018040001;Name=Cc11_g07560 | |
| 62638 chr11 manual_curation polypeptide 24364427 24368323 . + . ID=GSCOCP00018040001;Dbxref=InterPro:IPR000038,InterPro:IPR000767,InterPro:IPR002182,PANTHER:PTHR18884,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q60CZ8,SwissProt:Q6L3Z4,SwissProt:Q6L438,TAIR:AT1G50180.1,TAIR:AT3G46530.1,TAIR:AT3G46730.1,TrEMBL:A4UV41,TrEMBL:Q60CZ7,TrEMBL:Q6L426;Derives_from=GSCOCT00018040001;Name=Cc11_g07560;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0005525,GO:0006915,GO:0006952,GO:0007049,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:R1B-12,CC_gene:R1A-6,CC_gene:R1A-10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018040001~ Hypothetical protein~ R1B-12~ missing_functional_completeness;original_location=complement(join(350091..350681%2C347976..348950%2C347373..347585%2C346785..347228));owner=coffea | |
| 62639 chr11 manual_curation exon 24367880 24368323 . + . Parent=GSCOCT00018040001 | |
| 62640 chr11 manual_curation exon 24367523 24367735 . + . Parent=GSCOCT00018040001 | |
| 62641 chr11 manual_curation exon 24366158 24367132 . + . Parent=GSCOCT00018040001 | |
| 62642 chr11 manual_curation exon 24364427 24365017 . + . Parent=GSCOCT00018040001 | |
| 62643 chr11 manual_curation CDS 24367880 24368323 . + 0 Parent=GSCOCT00018040001 | |
| 62644 chr11 manual_curation CDS 24367523 24367735 . + 0 Parent=GSCOCT00018040001 | |
| 62645 chr11 manual_curation CDS 24366158 24367132 . + 0 Parent=GSCOCT00018040001 | |
| 62646 chr11 manual_curation CDS 24364427 24365017 . + 0 Parent=GSCOCT00018040001 | |
| 62647 chr11 manual_curation gene 24390049 24400099 . - . ID=GSCOCG00018035001;Name=Cc11_g07570 | |
| 62648 chr11 manual_curation mRNA 24390049 24400099 . - . ID=GSCOCT00018035001;Parent=GSCOCG00018035001;Name=Cc11_g07570 | |
| 62649 chr11 manual_curation polypeptide 24390049 24400099 . - . ID=GSCOCP00018035001;Dbxref=InterPro:IPR003480,PFAM:PF02458,SwissProt:Q70PR7,SwissProt:Q94FT4,SwissProt:Q9ZTK5,TAIR:AT3G26040.1,TAIR:AT3G30280.1,TAIR:AT4G15390.1,TrEMBL:B9H5H0,TrEMBL:B9NFC7,TrEMBL:F6H0C6;Derives_from=GSCOCT00018035001;Name=Cc11_g07570;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.3.1.150,PRODUCT:Putative Predicted protein,CC_functional_completeness:modules,CC_gene:SALAT,CC_gene:DAT,CC_gene:ACT;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018035001~ Putative Predicted protein~ SALAT~ modules;original_location=join(315009..315259%2C323862..324267%2C324640..325059);owner=coffea | |
| 62650 chr11 manual_curation exon 24399849 24400099 . - . Parent=GSCOCT00018035001 | |
| 62651 chr11 manual_curation exon 24390841 24391246 . - . Parent=GSCOCT00018035001 | |
| 62652 chr11 manual_curation exon 24390049 24390468 . - . Parent=GSCOCT00018035001 | |
| 62653 chr11 manual_curation CDS 24399849 24400099 . - 0 Parent=GSCOCT00018035001 | |
| 62654 chr11 manual_curation CDS 24390841 24391246 . - 2 Parent=GSCOCT00018035001 | |
| 62655 chr11 manual_curation CDS 24390049 24390468 . - 0 Parent=GSCOCT00018035001 | |
| 62656 chr11 manual_curation gene 24403896 24404783 . - . ID=GSCOCG00018033001;Name=Cc11_g07580 | |
| 62657 chr11 manual_curation mRNA 24403896 24404783 . - . ID=GSCOCT00018033001;Parent=GSCOCG00018033001;Name=Cc11_g07580 | |
| 62658 chr11 manual_curation polypeptide 24403896 24404783 . - . ID=GSCOCP00018033001;Dbxref=GENE3D:G3DSA:3.90.470.10,InterPro:IPR001063,InterPro:IPR005721,PANTHER:PTHR11593,PFAM:PF00237,SUPERFAMILY:SSF54843,SwissProt:O48557,SwissProt:P35266,SwissProt:P51413,TAIR:AT1G27400.1,TAIR:AT1G67430.1,TrEMBL:B4FHE4,TrEMBL:C5YUM9,TrEMBL:Q947H2;Derives_from=GSCOCT00018033001;Name=Cc11_g07580;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,GO:0015934,CC_EC_number:missing_EC_number,PRODUCT:Putative Ribosomal protein L22/L17,CC_functional_completeness:complete,CC_gene:RPL17,CC_gene:RPL17B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018033001~ Putative Ribosomal protein L22/L17~ RPL17~ complete;original_location=join(310325..310345%2C310527..310595%2C310675..310780%2C310869..311212);owner=coffea | |
| 62659 chr11 manual_curation exon 24404763 24404783 . - . Parent=GSCOCT00018033001 | |
| 62660 chr11 manual_curation exon 24404513 24404581 . - . Parent=GSCOCT00018033001 | |
| 62661 chr11 manual_curation exon 24404328 24404433 . - . Parent=GSCOCT00018033001 | |
| 62662 chr11 manual_curation exon 24403896 24404239 . - . Parent=GSCOCT00018033001 | |
| 62663 chr11 manual_curation CDS 24404763 24404783 . - 0 Parent=GSCOCT00018033001 | |
| 62664 chr11 manual_curation CDS 24404513 24404581 . - 0 Parent=GSCOCT00018033001 | |
| 62665 chr11 manual_curation CDS 24404328 24404433 . - 0 Parent=GSCOCT00018033001 | |
| 62666 chr11 manual_curation CDS 24403896 24404239 . - 1 Parent=GSCOCT00018033001 | |
| 62667 chr11 manual_curation gene 24445184 24445691 . - . ID=GSCOCG00018032001;Name=Cc11_g07590 | |
| 62668 chr11 manual_curation mRNA 24445184 24445691 . - . ID=GSCOCT00018032001;Parent=GSCOCG00018032001;Name=Cc11_g07590 | |
| 62669 chr11 manual_curation polypeptide 24445184 24445691 . - . ID=GSCOCP00018032001;Dbxref=SwissProt:Q05047,SwissProt:Q9SHG5,TAIR:AT1G17060.1,TAIR:AT3G14610.1,TAIR:AT3G14660.1,TrEMBL:F8S8F2,TrEMBL:Q42700,TrEMBL:Q42701;Derives_from=GSCOCT00018032001;Name=Cc11_g07590;Ontology_term=CC_evidence_code:ISS,CC_EC_number:1.3.3.9,PRODUCT:Putative Secologanin synthase,CC_functional_completeness:fragment,CC_gene:CYP72A1,CC_gene:CYP72C1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018032001~ Putative Secologanin synthase~ CYP72A1~ fragment;original_location=join(269417..269690%2C269776..269924);owner=coffea | |
| 62670 chr11 manual_curation exon 24445418 24445691 . - . Parent=GSCOCT00018032001 | |
| 62671 chr11 manual_curation exon 24445184 24445332 . - . Parent=GSCOCT00018032001 | |
| 62672 chr11 manual_curation CDS 24445418 24445691 . - 0 Parent=GSCOCT00018032001 | |
| 62673 chr11 manual_curation CDS 24445184 24445332 . - 1 Parent=GSCOCT00018032001 | |
| 62674 chr11 manual_curation gene 24514026 24517082 . - . ID=GSCOCG00018028001;Name=Cc11_g07600 | |
| 62675 chr11 manual_curation mRNA 24514026 24517082 . - . ID=GSCOCT00018028001;Parent=GSCOCG00018028001;Name=Cc11_g07600 | |
| 62676 chr11 manual_curation polypeptide 24514275 24516842 . - . ID=GSCOCP00018028001;Dbxref=InterPro:IPR007658,PFAM:PF04578,TAIR:AT5G45470.1,TAIR:AT5G45480.1,TAIR:AT5G45540.1,TrEMBL:B9ND72,TrEMBL:B9SS00,TrEMBL:F6H2E9;Derives_from=GSCOCT00018028001;Name=Cc11_g07600;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF594),CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018028001~ Protein of unknown function (DUF594)~ unknown_gene~ fragment;original_location=join(198266..199859%2C200049..200239%2C200459..200833);owner=coffea | |
| 62677 chr11 manual_curation exon 24515249 24517082 . - . Parent=GSCOCT00018028001 | |
| 62678 chr11 manual_curation exon 24514869 24515059 . - . Parent=GSCOCT00018028001 | |
| 62679 chr11 manual_curation exon 24514026 24514649 . - . Parent=GSCOCT00018028001 | |
| 62680 chr11 manual_curation CDS 24515249 24516842 . - 0 Parent=GSCOCT00018028001 | |
| 62681 chr11 manual_curation CDS 24514869 24515059 . - 1 Parent=GSCOCT00018028001 | |
| 62682 chr11 manual_curation CDS 24514275 24514649 . - 0 Parent=GSCOCT00018028001 | |
| 62683 chr11 manual_curation gene 24521972 24522475 . + . ID=GSCOCG00018027001;Name=Cc11_g07610 | |
| 62684 chr11 manual_curation mRNA 24521972 24522475 . + . ID=GSCOCT00018027001;Parent=GSCOCG00018027001;Name=Cc11_g07610 | |
| 62685 chr11 manual_curation polypeptide 24521972 24522475 . + . ID=GSCOCP00018027001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:Q50EK0,SwissProt:Q50EK1,SwissProt:Q8W4T9,TAIR:AT2G42850.1,TAIR:AT5G36110.1,TAIR:AT5G36130.1,TrEMBL:F4YF71,TrEMBL:H2DH15,TrEMBL:H2DH16;Derives_from=GSCOCT00018027001;Name=Cc11_g07610;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.77,PRODUCT:Cytochrome P450 716B2,CC_functional_completeness:fragment,CC_gene:CYP716B2,CC_gene:CYP716B1,CC_gene:CYP725A2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018027001~ Cytochrome P450 716B2~ CYP716B2~ fragment;original_location=complement(join(193014..193136%2C192633..192902));owner=coffea | |
| 62686 chr11 manual_curation exon 24522206 24522475 . + . Parent=GSCOCT00018027001 | |
| 62687 chr11 manual_curation exon 24521972 24522094 . + . Parent=GSCOCT00018027001 | |
| 62688 chr11 manual_curation CDS 24522206 24522475 . + 0 Parent=GSCOCT00018027001 | |
| 62689 chr11 manual_curation CDS 24521972 24522094 . + 0 Parent=GSCOCT00018027001 | |
| 62690 chr11 manual_curation gene 24531067 24532829 . + . ID=GSCOCG00018026001;Name=Cc11_g07620 | |
| 62691 chr11 manual_curation mRNA 24531067 24532829 . + . ID=GSCOCT00018026001;Parent=GSCOCG00018026001;Name=Cc11_g07620 | |
| 62692 chr11 manual_curation polypeptide 24531067 24532829 . + . ID=GSCOCP00018026001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,SUPERFAMILY:SSF48264,SwissProt:O64635,SwissProt:O64637,SwissProt:O64638,TAIR:AT2G45550.1,TAIR:AT2G45570.1,TAIR:AT2G45580.1,TrEMBL:B3EXG1,TrEMBL:F6I333,TrEMBL:Q6PLI3;Derives_from=GSCOCT00018026001;Name=Cc11_g07620;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.87,PRODUCT:Putative Cytochrome P450 76C2,CC_functional_completeness:fragment,CC_gene:CYP76C3,CC_gene:CYP76C2,CC_gene:CYP76C4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018026001~ Putative Cytochrome P450 76C2~ CYP76C3~ fragment;original_location=complement(join(183690..184041%2C183158..183309%2C182279..182815));owner=coffea | |
| 62693 chr11 manual_curation exon 24532293 24532829 . + . Parent=GSCOCT00018026001 | |
| 62694 chr11 manual_curation exon 24531799 24531950 . + . Parent=GSCOCT00018026001 | |
| 62695 chr11 manual_curation exon 24531067 24531418 . + . Parent=GSCOCT00018026001 | |
| 62696 chr11 manual_curation CDS 24532293 24532829 . + 0 Parent=GSCOCT00018026001 | |
| 62697 chr11 manual_curation CDS 24531799 24531950 . + 1 Parent=GSCOCT00018026001 | |
| 62698 chr11 manual_curation CDS 24531067 24531418 . + 0 Parent=GSCOCT00018026001 | |
| 62699 chr11 manual_curation gene 24560455 24562343 . + . ID=GSCOCG00018024001;Name=Cc11_g07630 | |
| 62700 chr11 manual_curation mRNA 24560455 24562343 . + . ID=GSCOCT00018024001;Parent=GSCOCG00018024001;Name=Cc11_g07630 | |
| 62701 chr11 manual_curation polypeptide 24560455 24562343 . + . ID=GSCOCP00018024001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:O64635,SwissProt:O64637,SwissProt:O64638,TAIR:AT1G33720.1,TAIR:AT2G45580.1,TAIR:AT3G61040.1,TrEMBL:A5BZH2,TrEMBL:F6I337,TrEMBL:F6I339;Derives_from=GSCOCT00018024001;Name=Cc11_g07630;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.21,PRODUCT:Putative Cytochrome P450 76C3,CC_functional_completeness:fragment,CC_gene:CYP76C3,CC_gene:CYP76C2,CC_gene:CYP76C4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018024001~ Putative Cytochrome P450 76C3~ CYP76C3~ fragment;original_location=complement(join(154264..154653%2C153477..153787%2C153154..153422%2C152765..152814));owner=coffea | |
| 62702 chr11 manual_curation exon 24562294 24562343 . + . Parent=GSCOCT00018024001 | |
| 62703 chr11 manual_curation exon 24561686 24561954 . + . Parent=GSCOCT00018024001 | |
| 62704 chr11 manual_curation exon 24561321 24561631 . + . Parent=GSCOCT00018024001 | |
| 62705 chr11 manual_curation exon 24560455 24560844 . + . Parent=GSCOCT00018024001 | |
| 62706 chr11 manual_curation CDS 24562294 24562343 . + 1 Parent=GSCOCT00018024001 | |
| 62707 chr11 manual_curation CDS 24561686 24561954 . + 2 Parent=GSCOCT00018024001 | |
| 62708 chr11 manual_curation CDS 24561321 24561631 . + 0 Parent=GSCOCT00018024001 | |
| 62709 chr11 manual_curation CDS 24560455 24560844 . + 0 Parent=GSCOCT00018024001 | |
| 62710 chr11 manual_curation gene 24563822 24566674 . + . ID=GSCOCG00018023001;Name=Cc11_g07640 | |
| 62711 chr11 manual_curation mRNA 24563822 24566674 . + . ID=GSCOCT00018023001;Parent=GSCOCG00018023001;Name=Cc11_g07640 | |
| 62712 chr11 manual_curation polypeptide 24563822 24566674 . + . ID=GSCOCP00018023001;Dbxref=GENE3D:G3DSA:1.20.1050.10,GENE3D:G3DSA:3.40.30.10,InterPro:IPR004045,InterPro:IPR010987,InterPro:IPR012335,PFAM:PF02798,SUPERFAMILY:SSF47616,SwissProt:Q9FUS8,SwissProt:Q9FUS9,SwissProt:Q9XIF8,TAIR:AT1G10360.1,TAIR:AT1G10370.1,TAIR:AT1G59700.1,TrEMBL:A9PG99,TrEMBL:C8KH57,TrEMBL:D7KKP8;Derives_from=GSCOCT00018023001;Name=Cc11_g07640;Ontology_term=CC_evidence_code:ISS,CC_EC_number:4.4.1.5,PRODUCT:Glutathione S-transferase U17,CC_functional_completeness:fragment,CC_gene:GSTU17,CC_gene:GSTU18,CC_gene:GSTU16;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018023001~ Glutathione S-transferase U17~ GSTU17~ fragment;original_location=complement(join(151258..151286%2C150706..150802%2C150504..150582%2C150020..150033%2C149059..149169%2C148434..148550));owner=coffea | |
| 62713 chr11 manual_curation exon 24566558 24566674 . + . Parent=GSCOCT00018023001 | |
| 62714 chr11 manual_curation exon 24565939 24566049 . + . Parent=GSCOCT00018023001 | |
| 62715 chr11 manual_curation exon 24565075 24565088 . + . Parent=GSCOCT00018023001 | |
| 62716 chr11 manual_curation exon 24564526 24564604 . + . Parent=GSCOCT00018023001 | |
| 62717 chr11 manual_curation exon 24564306 24564402 . + . Parent=GSCOCT00018023001 | |
| 62718 chr11 manual_curation exon 24563822 24563850 . + . Parent=GSCOCT00018023001 | |
| 62719 chr11 manual_curation CDS 24566558 24566674 . + 0 Parent=GSCOCT00018023001 | |
| 62720 chr11 manual_curation CDS 24565939 24566049 . + 0 Parent=GSCOCT00018023001 | |
| 62721 chr11 manual_curation CDS 24565075 24565088 . + 1 Parent=GSCOCT00018023001 | |
| 62722 chr11 manual_curation CDS 24564526 24564604 . + 0 Parent=GSCOCT00018023001 | |
| 62723 chr11 manual_curation CDS 24564306 24564402 . + 2 Parent=GSCOCT00018023001 | |
| 62724 chr11 manual_curation CDS 24563822 24563850 . + 0 Parent=GSCOCT00018023001 | |
| 62725 chr11 manual_curation gene 24569366 24570868 . - . ID=GSCOCG00018022001;Name=Cc11_g07650 | |
| 62726 chr11 manual_curation mRNA 24569366 24570868 . - . ID=GSCOCT00018022001;Parent=GSCOCG00018022001;Name=Cc11_g07650 | |
| 62727 chr11 manual_curation polypeptide 24569366 24570868 . - . ID=GSCOCP00018022001;Dbxref=InterPro:IPR005299,PFAM:PF03492,SwissProt:Q9FKC8,SwissProt:Q9FKD0,SwissProt:Q9LS10,TAIR:AT1G15125.1,TAIR:AT1G68040.1,TAIR:AT5G38100.1,TrEMBL:D7T8J5,TrEMBL:D7T8J6,TrEMBL:D7T8J8;Derives_from=GSCOCT00018022001;Name=Cc11_g07650;Ontology_term=CC_evidence_code:ISS,GO:0008168,CC_EC_number:2.1.1.141,PRODUCT:Putative Probable S-adenosylmethionine-dependent methyltransferase At5g38100,CC_functional_completeness:complete,CC_gene:At5g38100,CC_gene:At5g37990,CC_gene:At5g37970;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018022001~ Putative Probable S-adenosylmethionine-dependent methyltransferase At5g38100~ At5g38100~ complete;original_location=join(144240..144335%2C144600..145262%2C145404..145742);owner=coffea | |
| 62728 chr11 manual_curation exon 24570773 24570868 . - . Parent=GSCOCT00018022001 | |
| 62729 chr11 manual_curation exon 24569846 24570508 . - . Parent=GSCOCT00018022001 | |
| 62730 chr11 manual_curation exon 24569366 24569704 . - . Parent=GSCOCT00018022001 | |
| 62731 chr11 manual_curation CDS 24570773 24570868 . - 0 Parent=GSCOCT00018022001 | |
| 62732 chr11 manual_curation CDS 24569846 24570508 . - 0 Parent=GSCOCT00018022001 | |
| 62733 chr11 manual_curation CDS 24569366 24569704 . - 0 Parent=GSCOCT00018022001 | |
| 62734 chr11 manual_curation gene 24589618 24591726 . + . ID=GSCOCG00018021001;Name=Cc11_g07660 | |
| 62735 chr11 manual_curation mRNA 24589618 24591726 . + . ID=GSCOCT00018021001;Parent=GSCOCG00018021001;Name=Cc11_g07660 | |
| 62736 chr11 manual_curation polypeptide 24589618 24591726 . + . ID=GSCOCP00018021001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q6L3Z7,SwissProt:Q6L403,SwissProt:Q6L438,TAIR:AT1G53350.1,TAIR:AT1G58390.1,TAIR:AT5G43470.1,TrEMBL:A0FD16,TrEMBL:A0FD19,TrEMBL:A1X877;Derives_from=GSCOCT00018021001;Name=Cc11_g07660;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1B-17,CC_functional_completeness:fragment,CC_gene:R1B-17,CC_gene:R1B-14,CC_gene:R1A-6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018021001~ Putative late blight resistance protein homolog R1B-17~ R1B-17~ fragment;original_location=complement(123382..125490);owner=coffea | |
| 62737 chr11 manual_curation exon 24589618 24591726 . + . Parent=GSCOCT00018021001 | |
| 62738 chr11 manual_curation CDS 24589618 24591726 . + 0 Parent=GSCOCT00018021001 | |
| 62739 chr11 manual_curation gene 24601430 24605460 . + . ID=GSCOCG00018020001;Name=Cc11_g07670 | |
| 62740 chr11 manual_curation mRNA 24601430 24605460 . + . ID=GSCOCT00018020001;Parent=GSCOCG00018020001;Name=Cc11_g07670 | |
| 62741 chr11 manual_curation polypeptide 24601631 24605460 . + . ID=GSCOCP00018020001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q60CZ8,SwissProt:Q6L3Z7,SwissProt:Q6L438,TAIR:AT1G53350.1,TAIR:AT5G43470.1,TAIR:AT5G48620.1,TrEMBL:A0FD16,TrEMBL:A0FD19,TrEMBL:A1X877;Derives_from=GSCOCT00018020001;Name=Cc11_g07670;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1A-6,CC_functional_completeness:fragment,CC_gene:R1A-6,CC_gene:R1A-10,CC_gene:R1B-14;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018020001~ Putative late blight resistance protein homolog R1A-6~ R1A-6~ fragment;original_location=complement(join(113034..113477%2C109648..111864));owner=coffea | |
| 62742 chr11 manual_curation exon 24603244 24605460 . + . Parent=GSCOCT00018020001 | |
| 62743 chr11 manual_curation exon 24601430 24602074 . + . Parent=GSCOCT00018020001 | |
| 62744 chr11 manual_curation CDS 24603244 24605460 . + 0 Parent=GSCOCT00018020001 | |
| 62745 chr11 manual_curation CDS 24601631 24602074 . + 0 Parent=GSCOCT00018020001 | |
| 62746 chr11 manual_curation gene 24612873 24614956 . - . ID=GSCOCG00018018001;Name=Cc11_g07680 | |
| 62747 chr11 manual_curation mRNA 24612873 24614956 . - . ID=GSCOCT00018018001;Parent=GSCOCG00018018001;Name=Cc11_g07680 | |
| 62748 chr11 manual_curation polypeptide 24614007 24614606 . - . ID=GSCOCP00018018001;Derives_from=GSCOCT00018018001;Name=Cc11_g07680;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018018001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=100502..101101;owner=coffea | |
| 62749 chr11 manual_curation exon 24612873 24614956 . - . Parent=GSCOCT00018018001 | |
| 62750 chr11 manual_curation CDS 24614007 24614606 . - 0 Parent=GSCOCT00018018001 | |
| 62751 chr11 manual_curation gene 24615726 24620275 . - . ID=GSCOCG00018017001;Name=Cc11_g07690 | |
| 62752 chr11 manual_curation mRNA 24615726 24620275 . - . ID=GSCOCT00018017001;Parent=GSCOCG00018017001;Name=Cc11_g07690 | |
| 62753 chr11 manual_curation polypeptide 24616073 24620167 . - . ID=GSCOCP00018017001;Dbxref=GENE3D:G3DSA:2.120.10.80,InterPro:IPR000014,InterPro:IPR011043,InterPro:IPR011498,InterPro:IPR015915,InterPro:IPR022364,PFAM:PF07646,PROFILE:PS50112,SUPERFAMILY:SSF50965,SUPERFAMILY:SSF81383,SwissProt:Q2R2W1,SwissProt:Q5Z8K3,SwissProt:Q9C9W9,TAIR:AT1G68050.1,TAIR:AT2G18915.2,TAIR:AT5G57360.2,TrEMBL:B9MST1,TrEMBL:F6HFD3,TrEMBL:I1K5J7;Derives_from=GSCOCT00018017001;Name=Cc11_g07690;Ontology_term=CC_evidence_code:ISS,GO:0004871,GO:0005515,GO:0007165,CC_EC_number:missing_EC_number,PRODUCT:Adagio protein 3,CC_functional_completeness:complete,CC_gene:ADO3,CC_gene:Os11g0547000,CC_gene:Os06g0694000;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018017001~ Adagio protein 3~ ADO3~ complete;original_location=join(94941..95269%2C97427..99035);owner=coffea | |
| 62754 chr11 manual_curation exon 24619839 24620275 . - . Parent=GSCOCT00018017001 | |
| 62755 chr11 manual_curation exon 24615726 24617681 . - . Parent=GSCOCT00018017001 | |
| 62756 chr11 manual_curation CDS 24619839 24620167 . - 0 Parent=GSCOCT00018017001 | |
| 62757 chr11 manual_curation CDS 24616073 24617681 . - 2 Parent=GSCOCT00018017001 | |
| 62758 chr11 manual_curation gene 24624141 24625203 . - . ID=GSCOCG00018016001;Name=Cc11_g07700 | |
| 62759 chr11 manual_curation mRNA 24624141 24625203 . - . ID=GSCOCT00018016001;Parent=GSCOCG00018016001;Name=Cc11_g07700 | |
| 62760 chr11 manual_curation polypeptide 24624499 24625123 . - . ID=GSCOCP00018016001;Dbxref=TAIR:AT2G01755.1,TrEMBL:B9T4M8,TrEMBL:D7T8K4,TrEMBL:I1JDI2;Derives_from=GSCOCT00018016001;Name=Cc11_g07700;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018016001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=join(89985..90311%2C90430..90609);owner=coffea | |
| 62761 chr11 manual_curation exon 24624797 24625203 . - . Parent=GSCOCT00018016001 | |
| 62762 chr11 manual_curation exon 24624141 24624678 . - . Parent=GSCOCT00018016001 | |
| 62763 chr11 manual_curation CDS 24624797 24625123 . - 0 Parent=GSCOCT00018016001 | |
| 62764 chr11 manual_curation CDS 24624499 24624678 . - 0 Parent=GSCOCT00018016001 | |
| 62765 chr11 manual_curation gene 24626345 24629621 . + . ID=GSCOCG00018015001;Name=Cc11_g07710 | |
| 62766 chr11 manual_curation mRNA 24626345 24629621 . + . ID=GSCOCT00018015001;Parent=GSCOCG00018015001;Name=Cc11_g07710 | |
| 62767 chr11 manual_curation polypeptide 24626407 24629466 . + . ID=GSCOCP00018015001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001789,InterPro:IPR006447,InterPro:IPR009057,InterPro:IPR011006,InterPro:IPR012287,InterPro:IPR014778,PFAM:PF00072,PFAM:PF00249,PROFILE:PS50110,SMART:SM00448,SUPERFAMILY:SSF46689,SUPERFAMILY:SSF52172,SwissProt:Q8L9Y3,SwissProt:Q940D0,SwissProt:Q9ZWJ9,TAIR:AT2G01760.1,TAIR:AT3G16857.2,TAIR:AT4G16110.1,TIGRFAMs:TIGR01557,TrEMBL:B9HVU5,TrEMBL:D7GN46,TrEMBL:F6HFD2;Derives_from=GSCOCT00018015001;Name=Cc11_g07710;Ontology_term=CC_evidence_code:ISS,GO:0000156,GO:0000160,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Two-component response regulator ARR2,CC_functional_completeness:fragment,CC_gene:ARR2,CC_gene:ARR1,CC_gene:ARR14;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018015001~ Two-component response regulator ARR2~ ARR2~ fragment;original_location=complement(join(88569..88701%2C87961..88113%2C87482..87886%2C87228..87304%2C86719..86746%2C85642..85778));owner=coffea | |
| 62768 chr11 manual_curation exon 24629330 24629621 . + . Parent=GSCOCT00018015001 | |
| 62769 chr11 manual_curation exon 24628362 24628389 . + . Parent=GSCOCT00018015001 | |
| 62770 chr11 manual_curation exon 24627804 24627880 . + . Parent=GSCOCT00018015001 | |
| 62771 chr11 manual_curation exon 24627222 24627626 . + . Parent=GSCOCT00018015001 | |
| 62772 chr11 manual_curation exon 24626995 24627147 . + . Parent=GSCOCT00018015001 | |
| 62773 chr11 manual_curation exon 24626345 24626539 . + . Parent=GSCOCT00018015001 | |
| 62774 chr11 manual_curation CDS 24629330 24629466 . + 1 Parent=GSCOCT00018015001 | |
| 62775 chr11 manual_curation CDS 24628362 24628389 . + 0 Parent=GSCOCT00018015001 | |
| 62776 chr11 manual_curation CDS 24627804 24627880 . + 1 Parent=GSCOCT00018015001 | |
| 62777 chr11 manual_curation CDS 24627222 24627626 . + 1 Parent=GSCOCT00018015001 | |
| 62778 chr11 manual_curation CDS 24626995 24627147 . + 1 Parent=GSCOCT00018015001 | |
| 62779 chr11 manual_curation CDS 24626407 24626539 . + 0 Parent=GSCOCT00018015001 | |
| 62780 chr11 manual_curation gene 24631243 24638111 . + . ID=GSCOCG00018013001;Name=Cc11_g07720 | |
| 62781 chr11 manual_curation mRNA 24631243 24638111 . + . ID=GSCOCT00018013001;Parent=GSCOCG00018013001;Name=Cc11_g07720 | |
| 62782 chr11 manual_curation polypeptide 24631692 24637581 . + . ID=GSCOCP00018013001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001789,InterPro:IPR006447,InterPro:IPR009057,InterPro:IPR011006,InterPro:IPR012287,InterPro:IPR014778,InterPro:IPR017053,InterPro:IPR017930,PFAM:PF00072,PFAM:PF00249,PIR:PIRSF036392,PROFILE:PS50110,PROFILE:PS51294,SMART:SM00448,SUPERFAMILY:SSF46689,SUPERFAMILY:SSF52172,SwissProt:Q8L9Y3,SwissProt:Q940D0,SwissProt:Q9ZWJ9,TAIR:AT2G01760.1,TAIR:AT3G16857.2,TAIR:AT4G16110.1,TIGRFAMs:TIGR01557,TrEMBL:B9T4M7,TrEMBL:F6HFD2,TrEMBL:G1APJ8;Derives_from=GSCOCT00018013001;Name=Cc11_g07720;Ontology_term=CC_evidence_code:ISS,GO:0000156,GO:0000160,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:ARR2,CC_gene:ARR1,CC_gene:ARR14;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018013001~ Putative uncharacterized protein~ ARR2~ complete;original_location=complement(join(83284..83416%2C81291..81443%2C80822..81214%2C80551..80627%2C77527..78720));owner=coffea | |
| 62783 chr11 manual_curation exon 24636388 24638111 . + . Parent=GSCOCT00018013001 | |
| 62784 chr11 manual_curation exon 24634481 24634557 . + . Parent=GSCOCT00018013001 | |
| 62785 chr11 manual_curation exon 24633894 24634286 . + . Parent=GSCOCT00018013001 | |
| 62786 chr11 manual_curation exon 24633665 24633817 . + . Parent=GSCOCT00018013001 | |
| 62787 chr11 manual_curation exon 24631243 24631824 . + . Parent=GSCOCT00018013001 | |
| 62788 chr11 manual_curation CDS 24636388 24637581 . + 0 Parent=GSCOCT00018013001 | |
| 62789 chr11 manual_curation CDS 24634481 24634557 . + 1 Parent=GSCOCT00018013001 | |
| 62790 chr11 manual_curation CDS 24633894 24634286 . + 1 Parent=GSCOCT00018013001 | |
| 62791 chr11 manual_curation CDS 24633665 24633817 . + 1 Parent=GSCOCT00018013001 | |
| 62792 chr11 manual_curation CDS 24631692 24631824 . + 0 Parent=GSCOCT00018013001 | |
| 62793 chr11 manual_curation gene 24640638 24643178 . + . ID=GSCOCG00018011001;Name=Cc11_g07730 | |
| 62794 chr11 manual_curation mRNA 24640638 24643178 . + . ID=GSCOCT00018011001;Parent=GSCOCG00018011001;Name=Cc11_g07730 | |
| 62795 chr11 manual_curation polypeptide 24640638 24643178 . + . ID=GSCOCP00018011001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:O22307,SwissProt:O48923,SwissProt:O48957,TAIR:AT1G33720.1,TAIR:AT3G26230.1,TAIR:AT4G13770.1,TrEMBL:C6THD7,TrEMBL:F6I3I4,TrEMBL:F6I532;Derives_from=GSCOCT00018011001;Name=Cc11_g07730;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,CC_EC_number:1.14.13.71,PRODUCT:Putative Cytochrome P450,CC_functional_completeness:complete,CC_gene:CYP71D10,CC_gene:CYP71D11,CC_gene:CYP99A1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018011001~ Putative Cytochrome P450~ CYP71D10~ complete;original_location=complement(join(74285..74470%2C73587..73648%2C73345..73479%2C72447..72588%2C71930..72160));owner=coffea | |
| 62796 chr11 manual_curation exon 24642948 24643178 . + . Parent=GSCOCT00018011001 | |
| 62797 chr11 manual_curation exon 24642520 24642661 . + . Parent=GSCOCT00018011001 | |
| 62798 chr11 manual_curation exon 24641629 24641763 . + . Parent=GSCOCT00018011001 | |
| 62799 chr11 manual_curation exon 24641460 24641521 . + . Parent=GSCOCT00018011001 | |
| 62800 chr11 manual_curation exon 24640638 24640823 . + . Parent=GSCOCT00018011001 | |
| 62801 chr11 manual_curation CDS 24642948 24643178 . + 0 Parent=GSCOCT00018011001 | |
| 62802 chr11 manual_curation CDS 24642520 24642661 . + 2 Parent=GSCOCT00018011001 | |
| 62803 chr11 manual_curation CDS 24641629 24641763 . + 2 Parent=GSCOCT00018011001 | |
| 62804 chr11 manual_curation CDS 24641460 24641521 . + 0 Parent=GSCOCT00018011001 | |
| 62805 chr11 manual_curation CDS 24640638 24640823 . + 0 Parent=GSCOCT00018011001 | |
| 62806 chr11 manual_curation gene 24645694 24650696 . + . ID=GSCOCG00018010001;Name=Cc11_g07740 | |
| 62807 chr11 manual_curation mRNA 24645694 24650696 . + . ID=GSCOCT00018010001;Parent=GSCOCG00018010001;Name=Cc11_g07740 | |
| 62808 chr11 manual_curation polypeptide 24645764 24650696 . + . ID=GSCOCP00018010001;Dbxref=GENE3D:G3DSA:3.40.525.10,InterPro:IPR001251,InterPro:IPR011074,PFAM:PF00650,PROFILE:PS50191,SMART:SM00516,SUPERFAMILY:SSF46938,SUPERFAMILY:SSF52087,SwissProt:P24280,SwissProt:P33324,SwissProt:Q10137,TAIR:AT1G01630.1,TAIR:AT1G14820.3,TAIR:AT1G75170.1,TrEMBL:A2PZE8,TrEMBL:B9HJH3,TrEMBL:F6HFD0;Derives_from=GSCOCT00018010001;Name=Cc11_g07740;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative SEC14 cytosolic factor,CC_functional_completeness:fragment,CC_gene:SEC14,CC_gene:sec14,CC_gene:YKL091C;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018010001~ Putative SEC14 cytosolic factor~ SEC14~ fragment;original_location=complement(join(69273..69344%2C68917..69172%2C66506..66542%2C65382..65499%2C64763..64873%2C64412..64549));owner=coffea | |
| 62809 chr11 manual_curation exon 24650559 24650696 . + . Parent=GSCOCT00018010001 | |
| 62810 chr11 manual_curation exon 24650235 24650345 . + . Parent=GSCOCT00018010001 | |
| 62811 chr11 manual_curation exon 24649609 24649726 . + . Parent=GSCOCT00018010001 | |
| 62812 chr11 manual_curation exon 24648566 24648602 . + . Parent=GSCOCT00018010001 | |
| 62813 chr11 manual_curation exon 24645936 24646191 . + . Parent=GSCOCT00018010001 | |
| 62814 chr11 manual_curation exon 24645694 24645835 . + . Parent=GSCOCT00018010001 | |
| 62815 chr11 manual_curation CDS 24650559 24650696 . + 0 Parent=GSCOCT00018010001 | |
| 62816 chr11 manual_curation CDS 24650235 24650345 . + 0 Parent=GSCOCT00018010001 | |
| 62817 chr11 manual_curation CDS 24649609 24649726 . + 2 Parent=GSCOCT00018010001 | |
| 62818 chr11 manual_curation CDS 24648566 24648602 . + 1 Parent=GSCOCT00018010001 | |
| 62819 chr11 manual_curation CDS 24645936 24646191 . + 0 Parent=GSCOCT00018010001 | |
| 62820 chr11 manual_curation CDS 24645764 24645835 . + 0 Parent=GSCOCT00018010001 | |
| 62821 chr11 manual_curation gene 24662348 24662945 . - . ID=GSCOCG00018009001;Name=Cc11_g07750 | |
| 62822 chr11 manual_curation mRNA 24662348 24662945 . - . ID=GSCOCT00018009001;Parent=GSCOCG00018009001;Name=Cc11_g07750 | |
| 62823 chr11 manual_curation polypeptide 24662348 24662945 . - . ID=GSCOCP00018009001;Dbxref=InterPro:IPR000577,PANTHER:PTHR10196,SwissProt:O75191,SwissProt:Q3SYZ6,SwissProt:Q5R830,TAIR:AT5G49650.1,TrEMBL:B9IQD7,TrEMBL:C5X3D5,TrEMBL:F2CSF3;Derives_from=GSCOCT00018009001;Name=Cc11_g07750;Ontology_term=CC_evidence_code:ISS,GO:0005975,CC_EC_number:missing_EC_number,PRODUCT:xylulose kinase-2,CC_functional_completeness:fragment,CC_gene:XYLB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018009001~ xylulose kinase-2~ XYLB~ fragment;original_location=join(52163..52189%2C52493..52613%2C52684..52760);owner=coffea | |
| 62824 chr11 manual_curation exon 24662919 24662945 . - . Parent=GSCOCT00018009001 | |
| 62825 chr11 manual_curation exon 24662495 24662615 . - . Parent=GSCOCT00018009001 | |
| 62826 chr11 manual_curation exon 24662348 24662424 . - . Parent=GSCOCT00018009001 | |
| 62827 chr11 manual_curation CDS 24662919 24662945 . - 0 Parent=GSCOCT00018009001 | |
| 62828 chr11 manual_curation CDS 24662495 24662615 . - 0 Parent=GSCOCT00018009001 | |
| 62829 chr11 manual_curation CDS 24662348 24662424 . - 1 Parent=GSCOCT00018009001 | |
| 62830 chr11 manual_curation gene 24665222 24670289 . + . ID=GSCOCG00018008001;Name=Cc11_g07760 | |
| 62831 chr11 manual_curation mRNA 24665222 24670289 . + . ID=GSCOCT00018008001;Parent=GSCOCG00018008001;Name=Cc11_g07760 | |
| 62832 chr11 manual_curation polypeptide 24665814 24670139 . + . ID=GSCOCP00018008001;Dbxref=GENE3D:G3DSA:3.40.525.10,InterPro:IPR001251,InterPro:IPR011074,PFAM:PF00650,PROFILE:PS50191,SMART:SM00516,SUPERFAMILY:SSF46938,SUPERFAMILY:SSF52087,SwissProt:P33324,SwissProt:P53989,SwissProt:Q10137,TAIR:AT1G01630.1,TAIR:AT1G14820.3,TAIR:AT4G08690.2,TrEMBL:A2PZE8,TrEMBL:F6HFD0,TrEMBL:I1JDI4;Derives_from=GSCOCT00018008001;Name=Cc11_g07760;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative CRAL-TRIO domain-containing protein YKL091C,CC_functional_completeness:complete,CC_gene:YKL091C,CC_gene:sec14,CC_gene:SEC14;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018008001~ Putative CRAL-TRIO domain-containing protein YKL091C~ YKL091C~ complete;original_location=complement(join(49223..49294%2C48851..49106%2C47460..47496%2C47003..47120%2C45957..46067%2C44969..45106));owner=coffea | |
| 62833 chr11 manual_curation exon 24670002 24670289 . + . Parent=GSCOCT00018008001 | |
| 62834 chr11 manual_curation exon 24669041 24669151 . + . Parent=GSCOCT00018008001 | |
| 62835 chr11 manual_curation exon 24667988 24668105 . + . Parent=GSCOCT00018008001 | |
| 62836 chr11 manual_curation exon 24667612 24667648 . + . Parent=GSCOCT00018008001 | |
| 62837 chr11 manual_curation exon 24666002 24666257 . + . Parent=GSCOCT00018008001 | |
| 62838 chr11 manual_curation exon 24665222 24665885 . + . Parent=GSCOCT00018008001 | |
| 62839 chr11 manual_curation CDS 24670002 24670139 . + 0 Parent=GSCOCT00018008001 | |
| 62840 chr11 manual_curation CDS 24669041 24669151 . + 0 Parent=GSCOCT00018008001 | |
| 62841 chr11 manual_curation CDS 24667988 24668105 . + 2 Parent=GSCOCT00018008001 | |
| 62842 chr11 manual_curation CDS 24667612 24667648 . + 1 Parent=GSCOCT00018008001 | |
| 62843 chr11 manual_curation CDS 24666002 24666257 . + 0 Parent=GSCOCT00018008001 | |
| 62844 chr11 manual_curation CDS 24665814 24665885 . + 0 Parent=GSCOCT00018008001 | |
| 62845 chr11 manual_curation gene 24670343 24672267 . - . ID=GSCOCG00018007001;Name=Cc11_g07770 | |
| 62846 chr11 manual_curation mRNA 24670343 24672267 . - . ID=GSCOCT00018007001;Parent=GSCOCG00018007001;Name=Cc11_g07770 | |
| 62847 chr11 manual_curation polypeptide 24671593 24672267 . - . ID=GSCOCP00018007001;Dbxref=GENE3D:G3DSA:2.60.110.10,InterPro:IPR001938,InterPro:IPR017949,PFAM:PF00314,PIR:PIRSF002703,PRINTS:PR00347,PROFILE:PS51367,PROSITE:PS00316,SMART:SM00205,SUPERFAMILY:SSF49870,SwissProt:G5DC91,SwissProt:P07052,SwissProt:P13046,TAIR:AT1G75040.1,TAIR:AT1G75050.1,TAIR:AT4G11650.1,TrEMBL:E3SU11,TrEMBL:Q5XUG9,TrEMBL:Q9LLB7;Derives_from=GSCOCT00018007001;Name=Cc11_g07770;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pathogenesis-related protein R major form,CC_functional_completeness:complete,CC_gene:TLP;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018007001~ Pathogenesis-related protein R major form~ TLP~ complete;original_location=42841..43515;owner=coffea | |
| 62848 chr11 manual_curation exon 24670343 24672267 . - . Parent=GSCOCT00018007001 | |
| 62849 chr11 manual_curation CDS 24671593 24672267 . - 0 Parent=GSCOCT00018007001 | |
| 62850 chr11 manual_curation gene 24676808 24687066 . - . ID=GSCOCG00018006001;Name=Cc11_g07780 | |
| 62851 chr11 manual_curation mRNA 24676808 24687066 . - . ID=GSCOCT00018006001;Parent=GSCOCG00018006001;Name=Cc11_g07780 | |
| 62852 chr11 manual_curation polypeptide 24676808 24687066 . - . ID=GSCOCP00018006001;Dbxref=GENE3D:G3DSA:2.60.110.10,InterPro:IPR001938,InterPro:IPR017949,PFAM:PF00314,PRINTS:PR00347,PROFILE:PS51367,PROSITE:PS00316,SMART:SM00205,SUPERFAMILY:SSF49870,SwissProt:G5DC91,SwissProt:P07052,SwissProt:P13046,TAIR:AT1G75050.1,TAIR:AT1G77700.1,TAIR:AT4G11650.1,TrEMBL:E3SU11,TrEMBL:G7KDF3,TrEMBL:Q93XD1;Derives_from=GSCOCT00018006001;Name=Cc11_g07780;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pathogenesis-related protein R major form,CC_functional_completeness:complete,CC_gene:TLP;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018006001~ Pathogenesis-related protein R major form~ TLP~ complete;original_location=join(28042..28698%2C33432..34085%2C36280..36286%2C37684..38300);owner=coffea | |
| 62853 chr11 manual_curation exon 24686410 24687066 . - . Parent=GSCOCT00018006001 | |
| 62854 chr11 manual_curation exon 24681023 24681676 . - . Parent=GSCOCT00018006001 | |
| 62855 chr11 manual_curation exon 24678822 24678828 . - . Parent=GSCOCT00018006001 | |
| 62856 chr11 manual_curation exon 24676808 24677424 . - . Parent=GSCOCT00018006001 | |
| 62857 chr11 manual_curation CDS 24686410 24687066 . - 0 Parent=GSCOCT00018006001 | |
| 62858 chr11 manual_curation CDS 24681023 24681676 . - 0 Parent=GSCOCT00018006001 | |
| 62859 chr11 manual_curation CDS 24678822 24678828 . - 0 Parent=GSCOCT00018006001 | |
| 62860 chr11 manual_curation CDS 24676808 24677424 . - 1 Parent=GSCOCT00018006001 | |
| 62861 chr11 manual_curation gene 24692121 24692863 . + . ID=GSCOCG00018005001;Name=Cc11_g07790 | |
| 62862 chr11 manual_curation mRNA 24692121 24692863 . + . ID=GSCOCT00018005001;Parent=GSCOCG00018005001;Name=Cc11_g07790 | |
| 62863 chr11 manual_curation polypeptide 24692121 24692863 . + . ID=GSCOCP00018005001;Dbxref=InterPro:IPR015500,PANTHER:PTHR10795,SwissProt:O65351,SwissProt:Q39547,SwissProt:Q9LLL8,TAIR:AT5G58830.1,TAIR:AT5G59130.1,TAIR:AT5G59190.1,TrEMBL:D7MR36,TrEMBL:D7MX55,TrEMBL:F6HA66;Derives_from=GSCOCT00018005001;Name=Cc11_g07790;Ontology_term=CC_evidence_code:ISS,CC_EC_number:3.4.21.25,PRODUCT:Putative Cucumisin,CC_functional_completeness:fragment,CC_gene:ARA12,CC_gene:XSP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018005001~ Putative Cucumisin~ ARA12~ fragment;original_location=complement(join(22889..22987%2C22507..22659%2C22245..22406));owner=coffea | |
| 62864 chr11 manual_curation exon 24692702 24692863 . + . Parent=GSCOCT00018005001 | |
| 62865 chr11 manual_curation exon 24692449 24692601 . + . Parent=GSCOCT00018005001 | |
| 62866 chr11 manual_curation exon 24692121 24692219 . + . Parent=GSCOCT00018005001 | |
| 62867 chr11 manual_curation CDS 24692702 24692863 . + 0 Parent=GSCOCT00018005001 | |
| 62868 chr11 manual_curation CDS 24692449 24692601 . + 0 Parent=GSCOCT00018005001 | |
| 62869 chr11 manual_curation CDS 24692121 24692219 . + 0 Parent=GSCOCT00018005001 | |
| 62870 chr11 manual_curation gene 24694357 24695315 . - . ID=GSCOCG00018004001;Name=Cc11_g07800 | |
| 62871 chr11 manual_curation mRNA 24694357 24695315 . - . ID=GSCOCT00018004001;Parent=GSCOCG00018004001;Name=Cc11_g07800 | |
| 62872 chr11 manual_curation polypeptide 24694641 24695315 . - . ID=GSCOCP00018004001;Dbxref=GENE3D:G3DSA:2.60.110.10,InterPro:IPR001938,InterPro:IPR017949,PFAM:PF00314,PIR:PIRSF002703,PRINTS:PR00347,PROFILE:PS51367,PROSITE:PS00316,SMART:SM00205,SUPERFAMILY:SSF49870,SwissProt:G5DC91,SwissProt:P07052,SwissProt:P13046,TAIR:AT1G75030.1,TAIR:AT1G75050.1,TAIR:AT4G11650.1,TrEMBL:A2T1L9,TrEMBL:E3SU11,TrEMBL:Q93XD1;Derives_from=GSCOCT00018004001;Name=Cc11_g07800;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pathogenesis-related protein R major form,CC_functional_completeness:complete,CC_gene:TLP;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018004001~ Pathogenesis-related protein R major form~ TLP~ complete;original_location=19793..20467;owner=coffea | |
| 62873 chr11 manual_curation exon 24694357 24695315 . - . Parent=GSCOCT00018004001 | |
| 62874 chr11 manual_curation CDS 24694641 24695315 . - 0 Parent=GSCOCT00018004001 | |
| 62875 chr11 manual_curation gene 24706072 24707917 . + . ID=GSCOCG00018003001;Name=Cc11_g07810 | |
| 62876 chr11 manual_curation mRNA 24706072 24707917 . + . ID=GSCOCT00018003001;Parent=GSCOCG00018003001;Name=Cc11_g07810 | |
| 62877 chr11 manual_curation polypeptide 24706072 24707917 . + . ID=GSCOCP00018003001;Dbxref=InterPro:IPR015500,InterPro:IPR022398,PANTHER:PTHR10795,PROSITE:PS00137,SwissProt:O65351,SwissProt:Q39547,SwissProt:Q9LLL8,TAIR:AT5G59090.1,TAIR:AT5G59120.1,TAIR:AT5G59190.1,TrEMBL:D7MR73,TrEMBL:D7SKE6,TrEMBL:Q9FIF8;Derives_from=GSCOCT00018003001;Name=Cc11_g07810;Ontology_term=CC_evidence_code:ISS,CC_EC_number:3.4.21.25,PRODUCT:Putative Cucumisin,CC_functional_completeness:fragment,CC_gene:XSP1,CC_gene:ARA12;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00018003001~ Putative Cucumisin~ XSP1~ fragment;original_location=complement(join(9004..9036%2C8847..8919%2C7995..8132%2C7855..7939%2C7745..7796%2C7191..7394));owner=coffea | |
| 62878 chr11 manual_curation exon 24707714 24707917 . + . Parent=GSCOCT00018003001 | |
| 62879 chr11 manual_curation exon 24707312 24707363 . + . Parent=GSCOCT00018003001 | |
| 62880 chr11 manual_curation exon 24707169 24707253 . + . Parent=GSCOCT00018003001 | |
| 62881 chr11 manual_curation exon 24706976 24707113 . + . Parent=GSCOCT00018003001 | |
| 62882 chr11 manual_curation exon 24706189 24706261 . + . Parent=GSCOCT00018003001 | |
| 62883 chr11 manual_curation exon 24706072 24706104 . + . Parent=GSCOCT00018003001 | |
| 62884 chr11 manual_curation CDS 24707714 24707917 . + 0 Parent=GSCOCT00018003001 | |
| 62885 chr11 manual_curation CDS 24707312 24707363 . + 2 Parent=GSCOCT00018003001 | |
| 62886 chr11 manual_curation CDS 24707169 24707253 . + 1 Parent=GSCOCT00018003001 | |
| 62887 chr11 manual_curation CDS 24706976 24707113 . + 1 Parent=GSCOCT00018003001 | |
| 62888 chr11 manual_curation CDS 24706189 24706261 . + 0 Parent=GSCOCT00018003001 | |
| 62889 chr11 manual_curation CDS 24706072 24706104 . + 0 Parent=GSCOCT00018003001 | |
| 62890 chr11 manual_curation gene 24731049 24735234 . - . ID=GSCOCG00008239001;Name=Cc11_g07820 | |
| 62891 chr11 manual_curation mRNA 24731049 24735234 . - . ID=GSCOCT00008239001;Parent=GSCOCG00008239001;Name=Cc11_g07820 | |
| 62892 chr11 manual_curation polypeptide 24731049 24734875 . - . ID=GSCOCP00008239001;Dbxref=GENE3D:G3DSA:1.25.40.20,InterPro:IPR002110,InterPro:IPR020683,PFAM:PF00023,PROFILE:PS50088,PROFILE:PS50297,SMART:SM00248,SUPERFAMILY:SSF48403,SwissProt:Q5ZLC8,SwissProt:Q6AWW5,SwissProt:Q9C7A2,TAIR:AT1G03670.1,TAIR:AT4G03460.1,TAIR:AT4G03500.1,TrEMBL:A5B003,TrEMBL:B9N283,TrEMBL:F6GWH9;Derives_from=GSCOCT00008239001;Name=Cc11_g07820;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Ankyrin repeat-containing protein At5g02620,CC_functional_completeness:modules,CC_gene:At5g02620,CC_gene:At3g12360,CC_gene:ANKRD52;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00008239001~ Putative Ankyrin repeat-containing protein At5g02620~ At5g02620~ modules;original_location=complement(join(19077..19668%2C17482..18014%2C15842..16534));owner=coffea | |
| 62893 chr11 manual_curation exon 24731049 24731741 . - . Parent=GSCOCT00008239001 | |
| 62894 chr11 manual_curation exon 24732689 24733221 . - . Parent=GSCOCT00008239001 | |
| 62895 chr11 manual_curation exon 24734284 24735234 . - . Parent=GSCOCT00008239001 | |
| 62896 chr11 manual_curation CDS 24731049 24731741 . - 0 Parent=GSCOCT00008239001 | |
| 62897 chr11 manual_curation CDS 24732689 24733221 . - 1 Parent=GSCOCT00008239001 | |
| 62898 chr11 manual_curation CDS 24734284 24734875 . - 0 Parent=GSCOCT00008239001 | |
| 62899 chr11 manual_curation gene 24760835 24761679 . - . ID=GSCOCG00032961001;Name=Cc11_g07830 | |
| 62900 chr11 manual_curation mRNA 24760835 24761679 . - . ID=GSCOCT00032961001;Parent=GSCOCG00032961001;Name=Cc11_g07830 | |
| 62901 chr11 manual_curation polypeptide 24760835 24761679 . - . ID=GSCOCP00032961001;Dbxref=InterPro:IPR000719,InterPro:IPR011009,InterPro:IPR017442,PFAM:PF00069,PROFILE:PS50011,SUPERFAMILY:SSF56112,SwissProt:C0LGP4,SwissProt:Q9FIZ3,SwissProt:Q9SD62,TAIR:AT3G47090.1,TAIR:AT3G47570.1,TAIR:AT3G47580.1,TrEMBL:A5B5R9,TrEMBL:B9IHK8,TrEMBL:B9SWC8;Derives_from=GSCOCT00032961001;Name=Cc11_g07830;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0005524,GO:0006468,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:At3g47570,CC_gene:At3g47110,CC_gene:GSO2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032961001~ Hypothetical protein~ At3g47570~ missing_functional_completeness;original_location=join(6580987..6581158%2C6581218..6581355%2C6581494..6581831);owner=coffea | |
| 62902 chr11 manual_curation exon 24761508 24761679 . - . Parent=GSCOCT00032961001 | |
| 62903 chr11 manual_curation exon 24761311 24761448 . - . Parent=GSCOCT00032961001 | |
| 62904 chr11 manual_curation exon 24760835 24761172 . - . Parent=GSCOCT00032961001 | |
| 62905 chr11 manual_curation CDS 24761508 24761679 . - 0 Parent=GSCOCT00032961001 | |
| 62906 chr11 manual_curation CDS 24761311 24761448 . - 1 Parent=GSCOCT00032961001 | |
| 62907 chr11 manual_curation CDS 24760835 24761172 . - 1 Parent=GSCOCT00032961001 | |
| 62908 chr11 manual_curation gene 24791503 24808437 . - . ID=GSCOCG00032958001;Name=Cc11_g07840 | |
| 62909 chr11 manual_curation mRNA 24791503 24808437 . - . ID=GSCOCT00032958001;Parent=GSCOCG00032958001;Name=Cc11_g07840 | |
| 62910 chr11 manual_curation polypeptide 24791503 24808437 . - . ID=GSCOCP00032958001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:C0LGP4,SwissProt:C0LGQ5,SwissProt:Q9FL28,TAIR:AT3G47570.1,TAIR:AT3G47580.1,TAIR:AT5G46330.1,TrEMBL:B9SM56,TrEMBL:F6H510,TrEMBL:F6H520;Derives_from=GSCOCT00032958001;Name=Cc11_g07840;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570,CC_functional_completeness:complete,CC_gene:At3g47570,CC_gene:FLS2,CC_gene:GSO1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032958001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570~ At3g47570~ complete;original_location=join(6534229..6535153%2C6536809..6538800%2C6538969..6539296%2C6546532..6547394%2C6548238..6548312%2C6548649..6550640%2C6550811..6551163);owner=coffea | |
| 62911 chr11 manual_curation exon 24807513 24808437 . - . Parent=GSCOCT00032958001 | |
| 62912 chr11 manual_curation exon 24803866 24805857 . - . Parent=GSCOCT00032958001 | |
| 62913 chr11 manual_curation exon 24803370 24803697 . - . Parent=GSCOCT00032958001 | |
| 62914 chr11 manual_curation exon 24795272 24796134 . - . Parent=GSCOCT00032958001 | |
| 62915 chr11 manual_curation exon 24794354 24794428 . - . Parent=GSCOCT00032958001 | |
| 62916 chr11 manual_curation exon 24792026 24794017 . - . Parent=GSCOCT00032958001 | |
| 62917 chr11 manual_curation exon 24791503 24791855 . - . Parent=GSCOCT00032958001 | |
| 62918 chr11 manual_curation CDS 24807513 24808437 . - 0 Parent=GSCOCT00032958001 | |
| 62919 chr11 manual_curation CDS 24803866 24805857 . - 1 Parent=GSCOCT00032958001 | |
| 62920 chr11 manual_curation CDS 24803370 24803697 . - 1 Parent=GSCOCT00032958001 | |
| 62921 chr11 manual_curation CDS 24795272 24796134 . - 2 Parent=GSCOCT00032958001 | |
| 62922 chr11 manual_curation CDS 24794354 24794428 . - 1 Parent=GSCOCT00032958001 | |
| 62923 chr11 manual_curation CDS 24792026 24794017 . - 1 Parent=GSCOCT00032958001 | |
| 62924 chr11 manual_curation CDS 24791503 24791855 . - 1 Parent=GSCOCT00032958001 | |
| 62925 chr11 manual_curation gene 24813964 24816428 . - . ID=GSCOCG00032957001;Name=Cc11_g07850 | |
| 62926 chr11 manual_curation mRNA 24813964 24816428 . - . ID=GSCOCT00032957001;Parent=GSCOCG00032957001;Name=Cc11_g07850 | |
| 62927 chr11 manual_curation polypeptide 24813964 24816428 . - . ID=GSCOCP00032957001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR020635,PFAM:PF00560,PFAM:PF07714,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:C0LGP4,SwissProt:C0LGT6,SwissProt:Q9SD62,TAIR:AT3G47090.1,TAIR:AT3G47570.1,TAIR:AT5G20480.1,TrEMBL:B9SM56,TrEMBL:F6H520,TrEMBL:F6HLX8;Derives_from=GSCOCT00032957001;Name=Cc11_g07850;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570,CC_functional_completeness:complete,CC_gene:At3g47570,CC_gene:EFR,CC_gene:At3g47110;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032957001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570~ At3g47570~ complete;original_location=join(6526238..6526478%2C6526569..6527758%2C6527882..6528179%2C6528350..6528475%2C6528545..6528702);owner=coffea | |
| 62928 chr11 manual_curation exon 24816188 24816428 . - . Parent=GSCOCT00032957001 | |
| 62929 chr11 manual_curation exon 24814908 24816097 . - . Parent=GSCOCT00032957001 | |
| 62930 chr11 manual_curation exon 24814487 24814784 . - . Parent=GSCOCT00032957001 | |
| 62931 chr11 manual_curation exon 24814191 24814316 . - . Parent=GSCOCT00032957001 | |
| 62932 chr11 manual_curation exon 24813964 24814121 . - . Parent=GSCOCT00032957001 | |
| 62933 chr11 manual_curation CDS 24816188 24816428 . - 0 Parent=GSCOCT00032957001 | |
| 62934 chr11 manual_curation CDS 24814908 24816097 . - 1 Parent=GSCOCT00032957001 | |
| 62935 chr11 manual_curation CDS 24814487 24814784 . - 0 Parent=GSCOCT00032957001 | |
| 62936 chr11 manual_curation CDS 24814191 24814316 . - 1 Parent=GSCOCT00032957001 | |
| 62937 chr11 manual_curation CDS 24813964 24814121 . - 1 Parent=GSCOCT00032957001 | |
| 62938 chr11 manual_curation gene 24942614 24944268 . + . ID=GSCOCG00032955001;Name=Cc11_g07860 | |
| 62939 chr11 manual_curation mRNA 24942614 24944268 . + . ID=GSCOCT00032955001;Parent=GSCOCG00032955001;Name=Cc11_g07860 | |
| 62940 chr11 manual_curation polypeptide 24942614 24944268 . + . ID=GSCOCP00032955001;Derives_from=GSCOCT00032955001;Name=Cc11_g07860;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032955001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(6400005..6400052%2C6398398..6398544));owner=coffea | |
| 62941 chr11 manual_curation exon 24944122 24944268 . + . Parent=GSCOCT00032955001 | |
| 62942 chr11 manual_curation exon 24942614 24942661 . + . Parent=GSCOCT00032955001 | |
| 62943 chr11 manual_curation CDS 24944122 24944268 . + 0 Parent=GSCOCT00032955001 | |
| 62944 chr11 manual_curation CDS 24942614 24942661 . + 0 Parent=GSCOCT00032955001 | |
| 62945 chr11 manual_curation gene 24946413 24951396 . - . ID=GSCOCG00032954001;Name=Cc11_g07870 | |
| 62946 chr11 manual_curation mRNA 24946413 24951396 . - . ID=GSCOCT00032954001;Parent=GSCOCG00032954001;Name=Cc11_g07870 | |
| 62947 chr11 manual_curation polypeptide 24946413 24951396 . - . ID=GSCOCP00032954001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:C0LGP4,SwissProt:Q9FIZ3,SwissProt:Q9FL28,TAIR:AT3G47570.1,TAIR:AT3G47580.1,TAIR:AT5G46330.1,TrEMBL:B9SM56,TrEMBL:F6H520,TrEMBL:F6HLX8;Derives_from=GSCOCT00032954001;Name=Cc11_g07870;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570,CC_functional_completeness:complete,CC_gene:At3g47570,CC_gene:FLS2,CC_gene:GSO2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032954001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570~ At3g47570~ complete;original_location=join(6391270..6392188%2C6393376..6393447%2C6393797..6395788%2C6395937..6396253);owner=coffea | |
| 62948 chr11 manual_curation exon 24950478 24951396 . - . Parent=GSCOCT00032954001 | |
| 62949 chr11 manual_curation exon 24949219 24949290 . - . Parent=GSCOCT00032954001 | |
| 62950 chr11 manual_curation exon 24946878 24948869 . - . Parent=GSCOCT00032954001 | |
| 62951 chr11 manual_curation exon 24946413 24946729 . - . Parent=GSCOCT00032954001 | |
| 62952 chr11 manual_curation CDS 24950478 24951396 . - 0 Parent=GSCOCT00032954001 | |
| 62953 chr11 manual_curation CDS 24949219 24949290 . - 1 Parent=GSCOCT00032954001 | |
| 62954 chr11 manual_curation CDS 24946878 24948869 . - 1 Parent=GSCOCT00032954001 | |
| 62955 chr11 manual_curation CDS 24946413 24946729 . - 1 Parent=GSCOCT00032954001 | |
| 62956 chr11 manual_curation gene 24956812 24959043 . - . ID=GSCOCG00032953001;Name=Cc11_g07880 | |
| 62957 chr11 manual_curation mRNA 24956812 24959043 . - . ID=GSCOCT00032953001;Parent=GSCOCG00032953001;Name=Cc11_g07880 | |
| 62958 chr11 manual_curation polypeptide 24957212 24959043 . - . ID=GSCOCP00032953001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR020635,PFAM:PF00560,PFAM:PF07714,PROFILE:PS50011,PROSITE:PS00107,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:C0LGT6,SwissProt:Q9SD62,SwissProt:Q9ZUI0,TAIR:AT3G47090.1,TAIR:AT3G47110.1,TAIR:AT5G20480.1,TrEMBL:A5BVM4,TrEMBL:B9IHK8,TrEMBL:D7TKJ2;Derives_from=GSCOCT00032953001;Name=Cc11_g07880;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.10.2,PRODUCT:Putative receptor-like protein kinase At3g47110,CC_functional_completeness:complete,CC_gene:At3g47110,CC_gene:EFR,CC_gene:At2g24130;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032953001~ Putative receptor-like protein kinase At3g47110~ At3g47110~ complete;original_location=join(6383623..6383674%2C6383746..6384223%2C6384425..6384969%2C6385108..6385232%2C6385317..6385454);owner=coffea | |
| 62959 chr11 manual_curation exon 24958992 24959043 . - . Parent=GSCOCT00032953001 | |
| 62960 chr11 manual_curation exon 24958443 24958920 . - . Parent=GSCOCT00032953001 | |
| 62961 chr11 manual_curation exon 24957697 24958241 . - . Parent=GSCOCT00032953001 | |
| 62962 chr11 manual_curation exon 24957434 24957558 . - . Parent=GSCOCT00032953001 | |
| 62963 chr11 manual_curation exon 24956812 24957349 . - . Parent=GSCOCT00032953001 | |
| 62964 chr11 manual_curation CDS 24958992 24959043 . - 0 Parent=GSCOCT00032953001 | |
| 62965 chr11 manual_curation CDS 24958443 24958920 . - 1 Parent=GSCOCT00032953001 | |
| 62966 chr11 manual_curation CDS 24957697 24958241 . - 2 Parent=GSCOCT00032953001 | |
| 62967 chr11 manual_curation CDS 24957434 24957558 . - 1 Parent=GSCOCT00032953001 | |
| 62968 chr11 manual_curation CDS 24957212 24957349 . - 0 Parent=GSCOCT00032953001 | |
| 62969 chr11 manual_curation gene 24972129 24986949 . - . ID=GSCOCG00032952001;Name=Cc11_g07890 | |
| 62970 chr11 manual_curation mRNA 24972129 24986949 . - . ID=GSCOCT00032952001;Parent=GSCOCG00032952001;Name=Cc11_g07890 | |
| 62971 chr11 manual_curation polypeptide 24972129 24986949 . - . ID=GSCOCP00032952001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:C0LGP4,SwissProt:C0LGT6,SwissProt:Q9SD62,TAIR:AT3G47090.1,TAIR:AT3G47570.1,TAIR:AT3G47580.1,TrEMBL:A5C1G0,TrEMBL:D7TKJ2,TrEMBL:F6GXC9;Derives_from=GSCOCT00032952001;Name=Cc11_g07890;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570,CC_functional_completeness:complete,CC_gene:At3g47570,CC_gene:EFR,CC_gene:At3g47110;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032952001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570~ At3g47570~ complete;original_location=join(6355717..6356155%2C6356291..6356658%2C6361708..6361922%2C6362079..6362294%2C6362970..6363682%2C6363854..6364099%2C6369555..6370537);owner=coffea | |
| 62972 chr11 manual_curation exon 24986511 24986949 . - . Parent=GSCOCT00032952001 | |
| 62973 chr11 manual_curation exon 24986008 24986375 . - . Parent=GSCOCT00032952001 | |
| 62974 chr11 manual_curation exon 24980744 24980958 . - . Parent=GSCOCT00032952001 | |
| 62975 chr11 manual_curation exon 24980372 24980587 . - . Parent=GSCOCT00032952001 | |
| 62976 chr11 manual_curation exon 24978984 24979696 . - . Parent=GSCOCT00032952001 | |
| 62977 chr11 manual_curation exon 24978567 24978812 . - . Parent=GSCOCT00032952001 | |
| 62978 chr11 manual_curation exon 24972129 24973111 . - . Parent=GSCOCT00032952001 | |
| 62979 chr11 manual_curation CDS 24986511 24986949 . - 0 Parent=GSCOCT00032952001 | |
| 62980 chr11 manual_curation CDS 24986008 24986375 . - 1 Parent=GSCOCT00032952001 | |
| 62981 chr11 manual_curation CDS 24980744 24980958 . - 0 Parent=GSCOCT00032952001 | |
| 62982 chr11 manual_curation CDS 24980372 24980587 . - 2 Parent=GSCOCT00032952001 | |
| 62983 chr11 manual_curation CDS 24978984 24979696 . - 2 Parent=GSCOCT00032952001 | |
| 62984 chr11 manual_curation CDS 24978567 24978812 . - 1 Parent=GSCOCT00032952001 | |
| 62985 chr11 manual_curation CDS 24972129 24973111 . - 1 Parent=GSCOCT00032952001 | |
| 62986 chr11 manual_curation gene 24994242 24996365 . - . ID=GSCOCG00032951001;Name=Cc11_g07900 | |
| 62987 chr11 manual_curation mRNA 24994242 24996365 . - . ID=GSCOCT00032951001;Parent=GSCOCG00032951001;Name=Cc11_g07900 | |
| 62988 chr11 manual_curation polypeptide 24994242 24996365 . - . ID=GSCOCP00032951001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR020635,PFAM:PF00560,PFAM:PF07714,PROFILE:PS50011,PROSITE:PS00107,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:C0LGP4,SwissProt:C0LGT6,SwissProt:Q9ZUI0,TAIR:AT3G47090.1,TAIR:AT3G47570.1,TAIR:AT5G20480.1,TrEMBL:B9T577,TrEMBL:F6H520,TrEMBL:F6HJS0;Derives_from=GSCOCT00032951001;Name=Cc11_g07900;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570,CC_functional_completeness:complete,CC_gene:At3g47570,CC_gene:EFR,CC_gene:At2g24130;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032951001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570~ At3g47570~ complete;original_location=join(6346301..6346490%2C6346728..6347421%2C6347467..6347990%2C6348279..6348424);owner=coffea | |
| 62989 chr11 manual_curation exon 24996176 24996365 . - . Parent=GSCOCT00032951001 | |
| 62990 chr11 manual_curation exon 24995245 24995938 . - . Parent=GSCOCT00032951001 | |
| 62991 chr11 manual_curation exon 24994676 24995199 . - . Parent=GSCOCT00032951001 | |
| 62992 chr11 manual_curation exon 24994242 24994387 . - . Parent=GSCOCT00032951001 | |
| 62993 chr11 manual_curation CDS 24996176 24996365 . - 0 Parent=GSCOCT00032951001 | |
| 62994 chr11 manual_curation CDS 24995245 24995938 . - 1 Parent=GSCOCT00032951001 | |
| 62995 chr11 manual_curation CDS 24994676 24995199 . - 2 Parent=GSCOCT00032951001 | |
| 62996 chr11 manual_curation CDS 24994242 24994387 . - 1 Parent=GSCOCT00032951001 | |
| 62997 chr11 manual_curation gene 25067475 25068940 . + . ID=GSCOCG00032948001;Name=Cc11_g07910 | |
| 62998 chr11 manual_curation mRNA 25067475 25068940 . + . ID=GSCOCT00032948001;Parent=GSCOCG00032948001;Name=Cc11_g07910 | |
| 62999 chr11 manual_curation polypeptide 25067475 25068940 . + . ID=GSCOCP00032948001;Derives_from=GSCOCT00032948001;Name=Cc11_g07910;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032948001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(6275144..6275191%2C6273726..6273863));owner=coffea | |
| 63000 chr11 manual_curation exon 25068803 25068940 . + . Parent=GSCOCT00032948001 | |
| 63001 chr11 manual_curation exon 25067475 25067522 . + . Parent=GSCOCT00032948001 | |
| 63002 chr11 manual_curation CDS 25068803 25068940 . + 0 Parent=GSCOCT00032948001 | |
| 63003 chr11 manual_curation CDS 25067475 25067522 . + 0 Parent=GSCOCT00032948001 | |
| 63004 chr11 manual_curation gene 25069754 25077514 . - . ID=GSCOCG00032947001;Name=Cc11_g07920 | |
| 63005 chr11 manual_curation mRNA 25069754 25077514 . - . ID=GSCOCT00032947001;Parent=GSCOCG00032947001;Name=Cc11_g07920 | |
| 63006 chr11 manual_curation polypeptide 25069754 25077514 . - . ID=GSCOCP00032947001;Dbxref=InterPro:IPR001245,InterPro:IPR001611,InterPro:IPR003591,InterPro:IPR011009,InterPro:IPR013210,PFAM:PF00560,PFAM:PF07714,PFAM:PF08263,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:C0LGP4,SwissProt:C0LGQ5,SwissProt:C0LGT6,TAIR:AT3G47570.1,TAIR:AT4G20140.1,TAIR:AT5G20480.1,TrEMBL:B9GYD9,TrEMBL:B9SWC8,TrEMBL:F6H510;Derives_from=GSCOCT00032947001;Name=Cc11_g07920;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:3.1.3.16,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570,CC_functional_completeness:complete,CC_gene:At3g47570,CC_gene:EFR,CC_gene:GSO1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032947001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570~ At3g47570~ complete;original_location=join(6265152..6266073%2C6269089..6269195%2C6270867..6271187%2C6272562..6272912);owner=coffea | |
| 63007 chr11 manual_curation exon 25076593 25077514 . - . Parent=GSCOCT00032947001 | |
| 63008 chr11 manual_curation exon 25073471 25073577 . - . Parent=GSCOCT00032947001 | |
| 63009 chr11 manual_curation exon 25071479 25071799 . - . Parent=GSCOCT00032947001 | |
| 63010 chr11 manual_curation exon 25069754 25070104 . - . Parent=GSCOCT00032947001 | |
| 63011 chr11 manual_curation CDS 25076593 25077514 . - 0 Parent=GSCOCT00032947001 | |
| 63012 chr11 manual_curation CDS 25073471 25073577 . - 1 Parent=GSCOCT00032947001 | |
| 63013 chr11 manual_curation CDS 25071479 25071799 . - 0 Parent=GSCOCT00032947001 | |
| 63014 chr11 manual_curation CDS 25069754 25070104 . - 0 Parent=GSCOCT00032947001 | |
| 63015 chr11 manual_curation gene 25092736 25095430 . - . ID=GSCOCG00032946001;Name=Cc11_g07930 | |
| 63016 chr11 manual_curation mRNA 25092736 25095430 . - . ID=GSCOCT00032946001;Parent=GSCOCG00032946001;Name=Cc11_g07930 | |
| 63017 chr11 manual_curation polypeptide 25092736 25095430 . - . ID=GSCOCP00032946001;Dbxref=InterPro:IPR019557,PFAM:PF10536,SwissProt:Q9LNG5,TAIR:AT1G48120.1,TAIR:AT2G04865.1,TAIR:AT2G25010.1,TrEMBL:A5AU60,TrEMBL:A5B3Q0,TrEMBL:A5BXI2;Derives_from=GSCOCT00032946001;Name=Cc11_g07930;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Serine/threonine-protein phosphatase 7 long form homolog,CC_functional_completeness:fragment,CC_gene:At1g48120;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032946001~ Putative Serine/threonine-protein phosphatase 7 long form homolog~ At1g48120~ fragment;original_location=join(6247236..6247321%2C6247497..6247614%2C6248438..6248923%2C6249123..6249146%2C6249469..6249930);owner=coffea | |
| 63018 chr11 manual_curation exon 25095345 25095430 . - . Parent=GSCOCT00032946001 | |
| 63019 chr11 manual_curation exon 25095052 25095169 . - . Parent=GSCOCT00032946001 | |
| 63020 chr11 manual_curation exon 25093743 25094228 . - . Parent=GSCOCT00032946001 | |
| 63021 chr11 manual_curation exon 25093520 25093543 . - . Parent=GSCOCT00032946001 | |
| 63022 chr11 manual_curation exon 25092736 25093197 . - . Parent=GSCOCT00032946001 | |
| 63023 chr11 manual_curation CDS 25095345 25095430 . - 0 Parent=GSCOCT00032946001 | |
| 63024 chr11 manual_curation CDS 25095052 25095169 . - 2 Parent=GSCOCT00032946001 | |
| 63025 chr11 manual_curation CDS 25093743 25094228 . - 0 Parent=GSCOCT00032946001 | |
| 63026 chr11 manual_curation CDS 25093520 25093543 . - 0 Parent=GSCOCT00032946001 | |
| 63027 chr11 manual_curation CDS 25092736 25093197 . - 0 Parent=GSCOCT00032946001 | |
| 63028 chr11 manual_curation gene 25113526 25118855 . + . ID=GSCOCG00032943001;Name=Cc11_g07940 | |
| 63029 chr11 manual_curation mRNA 25113526 25118855 . + . ID=GSCOCT00032943001;Parent=GSCOCG00032943001;Name=Cc11_g07940 | |
| 63030 chr11 manual_curation polypeptide 25113526 25118855 . + . ID=GSCOCP00032943001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:C0LGP4,SwissProt:C0LGT6,SwissProt:Q9FL28,TAIR:AT3G47090.1,TAIR:AT3G47570.1,TAIR:AT5G46330.1,TrEMBL:A5B0Q4,TrEMBL:B9SM56,TrEMBL:F6HXR1;Derives_from=GSCOCT00032943001;Name=Cc11_g07940;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570,CC_functional_completeness:complete,CC_gene:At3g47570,CC_gene:FLS2,CC_gene:EFR;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032943001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570~ At3g47570~ complete;original_location=complement(join(6228195..6229140%2C6224292..6226271%2C6223811..6224163));owner=coffea | |
| 63031 chr11 manual_curation exon 25118503 25118855 . + . Parent=GSCOCT00032943001 | |
| 63032 chr11 manual_curation exon 25116395 25118374 . + . Parent=GSCOCT00032943001 | |
| 63033 chr11 manual_curation exon 25113526 25114471 . + . Parent=GSCOCT00032943001 | |
| 63034 chr11 manual_curation CDS 25118503 25118855 . + 1 Parent=GSCOCT00032943001 | |
| 63035 chr11 manual_curation CDS 25116395 25118374 . + 1 Parent=GSCOCT00032943001 | |
| 63036 chr11 manual_curation CDS 25113526 25114471 . + 0 Parent=GSCOCT00032943001 | |
| 63037 chr11 manual_curation gene 25121706 25126302 . + . ID=GSCOCG00032942001;Name=Cc11_g07950 | |
| 63038 chr11 manual_curation mRNA 25121706 25126302 . + . ID=GSCOCT00032942001;Parent=GSCOCG00032942001;Name=Cc11_g07950 | |
| 63039 chr11 manual_curation polypeptide 25121706 25126302 . + . ID=GSCOCP00032942001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:C0LGP4,SwissProt:C0LGQ5,SwissProt:Q9FL28,TAIR:AT3G47090.1,TAIR:AT3G47570.1,TAIR:AT5G46330.1,TrEMBL:A5B0Q4,TrEMBL:B9SM56,TrEMBL:F6H511;Derives_from=GSCOCT00032942001;Name=Cc11_g07950;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative LRR receptor-like serine/threonine-protein kinase FLS2,CC_functional_completeness:complete,CC_gene:FLS2,CC_gene:At3g47570,CC_gene:GSO1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032942001~ Putative LRR receptor-like serine/threonine-protein kinase FLS2~ FLS2~ complete;original_location=complement(join(6220039..6220960%2C6216895..6218877%2C6216364..6216743));owner=coffea | |
| 63040 chr11 manual_curation exon 25125923 25126302 . + . Parent=GSCOCT00032942001 | |
| 63041 chr11 manual_curation exon 25123789 25125771 . + . Parent=GSCOCT00032942001 | |
| 63042 chr11 manual_curation exon 25121706 25122627 . + . Parent=GSCOCT00032942001 | |
| 63043 chr11 manual_curation CDS 25125923 25126302 . + 1 Parent=GSCOCT00032942001 | |
| 63044 chr11 manual_curation CDS 25123789 25125771 . + 1 Parent=GSCOCT00032942001 | |
| 63045 chr11 manual_curation CDS 25121706 25122627 . + 0 Parent=GSCOCT00032942001 | |
| 63046 chr11 manual_curation gene 25129391 25133498 . + . ID=GSCOCG00032941001;Name=Cc11_g07960 | |
| 63047 chr11 manual_curation mRNA 25129391 25133498 . + . ID=GSCOCT00032941001;Parent=GSCOCG00032941001;Name=Cc11_g07960 | |
| 63048 chr11 manual_curation polypeptide 25129391 25133498 . + . ID=GSCOCP00032941001;Dbxref=InterPro:IPR001810,InterPro:IPR006527,InterPro:IPR017451,InterPro:IPR022364,PFAM:PF00646,PFAM:PF07734,PROFILE:PS50181,SMART:SM00256,SUPERFAMILY:SSF81383,SwissProt:Q8GXC7,SwissProt:Q9LIR8,SwissProt:Q9SFC7,TAIR:AT3G06240.1,TAIR:AT3G07870.1,TAIR:AT3G23880.1,TIGRFAMs:TIGR01640,TrEMBL:B9GTQ9,TrEMBL:B9HYR1,TrEMBL:B9MUE7;Derives_from=GSCOCT00032941001;Name=Cc11_g07960;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative F-box protein At3g07870,CC_functional_completeness:complete,CC_gene:At3g07870,CC_gene:At3g23880,CC_gene:At3g06240;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032941001~ Putative F-box protein At3g07870~ At3g07870~ complete;original_location=complement(join(6212064..6213275%2C6209168..6210391));owner=coffea | |
| 63049 chr11 manual_curation exon 25132275 25133498 . + . Parent=GSCOCT00032941001 | |
| 63050 chr11 manual_curation exon 25129391 25130602 . + . Parent=GSCOCT00032941001 | |
| 63051 chr11 manual_curation CDS 25132275 25133498 . + 0 Parent=GSCOCT00032941001 | |
| 63052 chr11 manual_curation CDS 25129391 25130602 . + 0 Parent=GSCOCT00032941001 | |
| 63053 chr11 manual_curation gene 25137053 25139208 . + . ID=GSCOCG00032940001;Name=Cc11_g07970 | |
| 63054 chr11 manual_curation mRNA 25137053 25139208 . + . ID=GSCOCT00032940001;Parent=GSCOCG00032940001;Name=Cc11_g07970 | |
| 63055 chr11 manual_curation polypeptide 25137053 25139208 . + . ID=GSCOCP00032940001;Dbxref=GENE3D:G3DSA:1.25.40.20,InterPro:IPR002110,InterPro:IPR020683,PFAM:PF00023,PROFILE:PS50088,PROFILE:PS50297,SMART:SM00248,SUPERFAMILY:SSF48403,SwissProt:Q6AWW5,SwissProt:Q9C7A2,SwissProt:Q9ZU96,TAIR:AT1G03670.1,TAIR:AT4G03460.1,TAIR:AT4G03500.1,TrEMBL:A5AT34,TrEMBL:A5B003,TrEMBL:F6HN60;Derives_from=GSCOCT00032940001;Name=Cc11_g07970;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Ankyrin repeat-containing protein At5g02620,CC_functional_completeness:modules,CC_gene:At5g02620,CC_gene:At3g12360,CC_gene:At2g01680;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032940001~ Putative Ankyrin repeat-containing protein At5g02620~ At5g02620~ modules;original_location=complement(join(6205028..6205613%2C6204221..6204759%2C6203458..6204123));owner=coffea | |
| 63056 chr11 manual_curation exon 25138543 25139208 . + . Parent=GSCOCT00032940001 | |
| 63057 chr11 manual_curation exon 25137907 25138445 . + . Parent=GSCOCT00032940001 | |
| 63058 chr11 manual_curation exon 25137053 25137638 . + . Parent=GSCOCT00032940001 | |
| 63059 chr11 manual_curation CDS 25138543 25139208 . + 0 Parent=GSCOCT00032940001 | |
| 63060 chr11 manual_curation CDS 25137907 25138445 . + 1 Parent=GSCOCT00032940001 | |
| 63061 chr11 manual_curation CDS 25137053 25137638 . + 0 Parent=GSCOCT00032940001 | |
| 63062 chr11 manual_curation gene 25166306 25170290 . + . ID=GSCOCG00032939001;Name=Cc11_g07980 | |
| 63063 chr11 manual_curation mRNA 25166306 25170290 . + . ID=GSCOCT00032939001;Parent=GSCOCG00032939001;Name=Cc11_g07980 | |
| 63064 chr11 manual_curation polypeptide 25166306 25170290 . + . ID=GSCOCP00032939001;Dbxref=InterPro:IPR001810,InterPro:IPR006527,InterPro:IPR017451,InterPro:IPR022364,PFAM:PF00646,PFAM:PF07734,PROFILE:PS50181,SMART:SM00256,SUPERFAMILY:SSF81383,SwissProt:Q8GXC7,SwissProt:Q9LIR8,SwissProt:Q9SFC7,TAIR:AT3G06240.1,TAIR:AT3G07870.1,TAIR:AT3G23880.1,TIGRFAMs:TIGR01640,TrEMBL:B9HYR1,TrEMBL:B9I0D0,TrEMBL:B9MUE7;Derives_from=GSCOCT00032939001;Name=Cc11_g07980;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative F-box protein At3g07870,CC_functional_completeness:complete,CC_gene:At3g07870,CC_gene:At3g23880,CC_gene:At3g06240;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032939001~ Putative F-box protein At3g07870~ At3g07870~ complete;original_location=complement(join(6175143..6176360%2C6172376..6173593));owner=coffea | |
| 63065 chr11 manual_curation exon 25169073 25170290 . + . Parent=GSCOCT00032939001 | |
| 63066 chr11 manual_curation exon 25166306 25167523 . + . Parent=GSCOCT00032939001 | |
| 63067 chr11 manual_curation CDS 25169073 25170290 . + 0 Parent=GSCOCT00032939001 | |
| 63068 chr11 manual_curation CDS 25166306 25167523 . + 0 Parent=GSCOCT00032939001 | |
| 63069 chr11 manual_curation gene 25203911 25209781 . + . ID=GSCOCG00032937001;Name=Cc11_g07990 | |
| 63070 chr11 manual_curation mRNA 25203911 25209781 . + . ID=GSCOCT00032937001;Parent=GSCOCG00032937001;Name=Cc11_g07990 | |
| 63071 chr11 manual_curation polypeptide 25203911 25209781 . + . ID=GSCOCP00032937001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR020635,PFAM:PF00560,PFAM:PF07714,PFAM:PF08263,PROFILE:PS50011,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q9FMD7,SwissProt:Q9LP77,SwissProt:Q9LVI6,TAIR:AT1G48480.1,TAIR:AT3G17840.1,TAIR:AT5G16590.1,TrEMBL:B9T5A8,TrEMBL:C5H8K0,TrEMBL:F6GSP3;Derives_from=GSCOCT00032937001;Name=Cc11_g07990;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable inactive receptor kinase At1g48480,CC_functional_completeness:complete,CC_gene:RKL1,CC_gene:RLK902,CC_gene:At5g16590;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032937001~ Putative Probable inactive receptor kinase At1g48480~ RKL1~ complete;original_location=complement(join(6137447..6138755%2C6136185..6136732%2C6134272..6134530%2C6132885..6133066));owner=coffea | |
| 63072 chr11 manual_curation exon 25209600 25209781 . + . Parent=GSCOCT00032937001 | |
| 63073 chr11 manual_curation exon 25208136 25208394 . + . Parent=GSCOCT00032937001 | |
| 63074 chr11 manual_curation exon 25205934 25206481 . + . Parent=GSCOCT00032937001 | |
| 63075 chr11 manual_curation exon 25203911 25205219 . + . Parent=GSCOCT00032937001 | |
| 63076 chr11 manual_curation CDS 25209600 25209781 . + 1 Parent=GSCOCT00032937001 | |
| 63077 chr11 manual_curation CDS 25208136 25208394 . + 0 Parent=GSCOCT00032937001 | |
| 63078 chr11 manual_curation CDS 25205934 25206481 . + 1 Parent=GSCOCT00032937001 | |
| 63079 chr11 manual_curation CDS 25203911 25205219 . + 0 Parent=GSCOCT00032937001 | |
| 63080 chr11 manual_curation gene 25211216 25213366 . + . ID=GSCOCG00032935001;Name=Cc11_g08000 | |
| 63081 chr11 manual_curation mRNA 25211216 25213366 . + . ID=GSCOCT00032935001;Parent=GSCOCG00032935001;Name=Cc11_g08000 | |
| 63082 chr11 manual_curation polypeptide 25211216 25213366 . + . ID=GSCOCP00032935001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR011009,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q9FMD7,SwissProt:Q9LP77,SwissProt:Q9LVI6,TAIR:AT1G48480.1,TAIR:AT3G17840.1,TAIR:AT5G16590.1,TrEMBL:B9I2C3,TrEMBL:B9IEF4,TrEMBL:F6GSP3;Derives_from=GSCOCT00032935001;Name=Cc11_g08000;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable inactive receptor kinase At1g48480,CC_functional_completeness:fragment,CC_gene:RKL1,CC_gene:RLK902,CC_gene:At5g16590;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032935001~ Putative Probable inactive receptor kinase At1g48480~ RKL1~ fragment;original_location=complement(join(6131102..6131450%2C6129300..6129868));owner=coffea | |
| 63083 chr11 manual_curation exon 25212798 25213366 . + . Parent=GSCOCT00032935001 | |
| 63084 chr11 manual_curation exon 25211216 25211564 . + . Parent=GSCOCT00032935001 | |
| 63085 chr11 manual_curation CDS 25212798 25213366 . + 1 Parent=GSCOCT00032935001 | |
| 63086 chr11 manual_curation CDS 25211216 25211564 . + 0 Parent=GSCOCT00032935001 | |
| 63087 chr11 manual_curation gene 25215854 25219325 . + . ID=GSCOCG00032934001;Name=Cc11_g08010 | |
| 63088 chr11 manual_curation mRNA 25215854 25219325 . + . ID=GSCOCT00032934001;Parent=GSCOCG00032934001;Name=Cc11_g08010 | |
| 63089 chr11 manual_curation polypeptide 25215854 25219325 . + . ID=GSCOCP00032934001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR011009,InterPro:IPR020635,PFAM:PF07714,PROFILE:PS50011,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q9FMD7,SwissProt:Q9LP77,SwissProt:Q9LVI6,TAIR:AT1G48480.1,TAIR:AT3G17840.1,TAIR:AT5G16590.1,TrEMBL:B9I2C3,TrEMBL:B9IEF4,TrEMBL:I1KQM2;Derives_from=GSCOCT00032934001;Name=Cc11_g08010;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable inactive receptor kinase At1g48480,CC_functional_completeness:fragment,CC_gene:RKL1,CC_gene:RLK902,CC_gene:At5g16590;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032934001~ Putative Probable inactive receptor kinase At1g48480~ RKL1~ fragment;original_location=complement(join(6126464..6126812%2C6123341..6123921));owner=coffea | |
| 63090 chr11 manual_curation exon 25218745 25219325 . + . Parent=GSCOCT00032934001 | |
| 63091 chr11 manual_curation exon 25215854 25216202 . + . Parent=GSCOCT00032934001 | |
| 63092 chr11 manual_curation CDS 25218745 25219325 . + 1 Parent=GSCOCT00032934001 | |
| 63093 chr11 manual_curation CDS 25215854 25216202 . + 0 Parent=GSCOCT00032934001 | |
| 63094 chr11 manual_curation gene 25220946 25225044 . + . ID=GSCOCG00032933001;Name=Cc11_g08020 | |
| 63095 chr11 manual_curation mRNA 25220946 25225044 . + . ID=GSCOCT00032933001;Parent=GSCOCG00032933001;Name=Cc11_g08020 | |
| 63096 chr11 manual_curation polypeptide 25221517 25225044 . + . ID=GSCOCP00032933001;Dbxref=InterPro:IPR001012,InterPro:IPR006567,InterPro:IPR018997,PFAM:PF00789,PFAM:PF09409,PROFILE:PS50033,SMART:SM00580,SwissProt:Q2KIJ6,SwissProt:Q99PL6,SwissProt:Q9BZV1,TAIR:AT2G01650.1,TrEMBL:A5C492,TrEMBL:F6HFE6,TrEMBL:I1KQ73;Derives_from=GSCOCT00032933001;Name=Cc11_g08020;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:plant UBX domain-containing protein 2,CC_functional_completeness:complete,CC_gene:UBXN6,CC_gene:Ubxn6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032933001~ plant UBX domain-containing protein 2~ UBXN6~ complete;original_location=complement(join(6120238..6121149%2C6118961..6119239%2C6117622..6117876));owner=coffea | |
| 63097 chr11 manual_curation exon 25224790 25225044 . + . Parent=GSCOCT00032933001 | |
| 63098 chr11 manual_curation exon 25223427 25223705 . + . Parent=GSCOCT00032933001 | |
| 63099 chr11 manual_curation exon 25220946 25222428 . + . Parent=GSCOCT00032933001 | |
| 63100 chr11 manual_curation CDS 25224790 25225044 . + 0 Parent=GSCOCT00032933001 | |
| 63101 chr11 manual_curation CDS 25223427 25223705 . + 0 Parent=GSCOCT00032933001 | |
| 63102 chr11 manual_curation CDS 25221517 25222428 . + 0 Parent=GSCOCT00032933001 | |
| 63103 chr11 manual_curation gene 25240698 25244695 . + . ID=GSCOCG00032930001;Name=Cc11_g08030 | |
| 63104 chr11 manual_curation mRNA 25240698 25244695 . + . ID=GSCOCT00032930001;Parent=GSCOCG00032930001;Name=Cc11_g08030 | |
| 63105 chr11 manual_curation polypeptide 25241034 25244394 . + . ID=GSCOCP00032930001;Dbxref=InterPro:IPR010399,InterPro:IPR018467,PFAM:PF06200,PFAM:PF09425,PROFILE:PS51320,SwissProt:Q58G47,SwissProt:Q8W4J8,SwissProt:Q9LVI4,TAIR:AT1G48500.1,TAIR:AT1G70700.1,TAIR:AT3G17860.1,TrEMBL:A5C491,TrEMBL:D7T8M7,TrEMBL:G4XSW3;Derives_from=GSCOCT00032930001;Name=Cc11_g08030;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein TIFY 6B,CC_functional_completeness:complete,CC_gene:TIFY6B,CC_gene:TIFY6A,CC_gene:TIFY7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032930001~ Putative Protein TIFY 6B~ TIFY6B~ complete;original_location=complement(join(6101548..6101632%2C6100485..6100678%2C6100029..6100234%2C6099780..6099870%2C6099320..6099644%2C6098754..6098811%2C6098272..6098407));owner=coffea | |
| 63106 chr11 manual_curation exon 25244259 25244695 . + . Parent=GSCOCT00032930001 | |
| 63107 chr11 manual_curation exon 25243855 25243912 . + . Parent=GSCOCT00032930001 | |
| 63108 chr11 manual_curation exon 25243022 25243346 . + . Parent=GSCOCT00032930001 | |
| 63109 chr11 manual_curation exon 25242796 25242886 . + . Parent=GSCOCT00032930001 | |
| 63110 chr11 manual_curation exon 25242432 25242637 . + . Parent=GSCOCT00032930001 | |
| 63111 chr11 manual_curation exon 25241988 25242181 . + . Parent=GSCOCT00032930001 | |
| 63112 chr11 manual_curation exon 25240698 25241118 . + . Parent=GSCOCT00032930001 | |
| 63113 chr11 manual_curation CDS 25244259 25244394 . + 2 Parent=GSCOCT00032930001 | |
| 63114 chr11 manual_curation CDS 25243855 25243912 . + 1 Parent=GSCOCT00032930001 | |
| 63115 chr11 manual_curation CDS 25243022 25243346 . + 0 Parent=GSCOCT00032930001 | |
| 63116 chr11 manual_curation CDS 25242796 25242886 . + 2 Parent=GSCOCT00032930001 | |
| 63117 chr11 manual_curation CDS 25242432 25242637 . + 0 Parent=GSCOCT00032930001 | |
| 63118 chr11 manual_curation CDS 25241988 25242181 . + 1 Parent=GSCOCT00032930001 | |
| 63119 chr11 manual_curation CDS 25241034 25241118 . + 0 Parent=GSCOCT00032930001 | |
| 63120 chr11 manual_curation gene 25253112 25273977 . - . ID=GSCOCG00032928001;Name=Cc11_g08040 | |
| 63121 chr11 manual_curation mRNA 25253112 25273977 . - . ID=GSCOCT00032928001;Parent=GSCOCG00032928001;Name=Cc11_g08040 | |
| 63122 chr11 manual_curation polypeptide 25254255 25273617 . - . ID=GSCOCP00032928001;Dbxref=InterPro:IPR021629,PFAM:PF11573,SwissProt:Q55BN0,TAIR:AT1G23230.1,TrEMBL:B9T6Z8,TrEMBL:D7KMR1,TrEMBL:I1L2W3;Derives_from=GSCOCT00032928001;Name=Cc11_g08040;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:CONTAINS InterPro DOMAIN/s,CC_functional_completeness:complete,CC_gene:med23;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032928001~ CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629)%3B Has 187 Blast hits to 184 proteins in 67 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 135%3B Fungi - 0%3B Plants - 43%3B Viruses - 0%3B Other Eukaryotes - 9 (source: NCBI BLink).~ med23~ complete;original_location=join(6069049..6069282%2C6069715..6069758%2C6071399..6071498%2C6071599..6072561%2C6073224..6073478%2C6074092..6074307%2C6075213..6075417%2C6076054..6076334%2C6077044..6077127%2C6079624..6079718%2C6080002..6080164%2C6080242..6080487%2C6081393..6081563%2C6081688..6081801%2C6081916..6082041%2C6083805..6083953%2C6084430..6084670%2C6084744..6085518%2C6086392..6086573%2C6088011..6088114%2C6088210..6088411);owner=coffea | |
| 63123 chr11 manual_curation exon 25273384 25273977 . - . Parent=GSCOCT00032928001 | |
| 63124 chr11 manual_curation exon 25272908 25272951 . - . Parent=GSCOCT00032928001 | |
| 63125 chr11 manual_curation exon 25271168 25271267 . - . Parent=GSCOCT00032928001 | |
| 63126 chr11 manual_curation exon 25270105 25271067 . - . Parent=GSCOCT00032928001 | |
| 63127 chr11 manual_curation exon 25269188 25269442 . - . Parent=GSCOCT00032928001 | |
| 63128 chr11 manual_curation exon 25268359 25268574 . - . Parent=GSCOCT00032928001 | |
| 63129 chr11 manual_curation exon 25267249 25267453 . - . Parent=GSCOCT00032928001 | |
| 63130 chr11 manual_curation exon 25266332 25266612 . - . Parent=GSCOCT00032928001 | |
| 63131 chr11 manual_curation exon 25265539 25265622 . - . Parent=GSCOCT00032928001 | |
| 63132 chr11 manual_curation exon 25262948 25263042 . - . Parent=GSCOCT00032928001 | |
| 63133 chr11 manual_curation exon 25262502 25262664 . - . Parent=GSCOCT00032928001 | |
| 63134 chr11 manual_curation exon 25262179 25262424 . - . Parent=GSCOCT00032928001 | |
| 63135 chr11 manual_curation exon 25261103 25261273 . - . Parent=GSCOCT00032928001 | |
| 63136 chr11 manual_curation exon 25260865 25260978 . - . Parent=GSCOCT00032928001 | |
| 63137 chr11 manual_curation exon 25260625 25260750 . - . Parent=GSCOCT00032928001 | |
| 63138 chr11 manual_curation exon 25258713 25258861 . - . Parent=GSCOCT00032928001 | |
| 63139 chr11 manual_curation exon 25257996 25258236 . - . Parent=GSCOCT00032928001 | |
| 63140 chr11 manual_curation exon 25257148 25257922 . - . Parent=GSCOCT00032928001 | |
| 63141 chr11 manual_curation exon 25256093 25256274 . - . Parent=GSCOCT00032928001 | |
| 63142 chr11 manual_curation exon 25254552 25254655 . - . Parent=GSCOCT00032928001 | |
| 63143 chr11 manual_curation exon 25253112 25254456 . - . Parent=GSCOCT00032928001 | |
| 63144 chr11 manual_curation CDS 25273384 25273617 . - 0 Parent=GSCOCT00032928001 | |
| 63145 chr11 manual_curation CDS 25272908 25272951 . - 0 Parent=GSCOCT00032928001 | |
| 63146 chr11 manual_curation CDS 25271168 25271267 . - 2 Parent=GSCOCT00032928001 | |
| 63147 chr11 manual_curation CDS 25270105 25271067 . - 0 Parent=GSCOCT00032928001 | |
| 63148 chr11 manual_curation CDS 25269188 25269442 . - 0 Parent=GSCOCT00032928001 | |
| 63149 chr11 manual_curation CDS 25268359 25268574 . - 0 Parent=GSCOCT00032928001 | |
| 63150 chr11 manual_curation CDS 25267249 25267453 . - 0 Parent=GSCOCT00032928001 | |
| 63151 chr11 manual_curation CDS 25266332 25266612 . - 1 Parent=GSCOCT00032928001 | |
| 63152 chr11 manual_curation CDS 25265539 25265622 . - 0 Parent=GSCOCT00032928001 | |
| 63153 chr11 manual_curation CDS 25262948 25263042 . - 0 Parent=GSCOCT00032928001 | |
| 63154 chr11 manual_curation CDS 25262502 25262664 . - 2 Parent=GSCOCT00032928001 | |
| 63155 chr11 manual_curation CDS 25262179 25262424 . - 0 Parent=GSCOCT00032928001 | |
| 63156 chr11 manual_curation CDS 25261103 25261273 . - 0 Parent=GSCOCT00032928001 | |
| 63157 chr11 manual_curation CDS 25260865 25260978 . - 0 Parent=GSCOCT00032928001 | |
| 63158 chr11 manual_curation CDS 25260625 25260750 . - 0 Parent=GSCOCT00032928001 | |
| 63159 chr11 manual_curation CDS 25258713 25258861 . - 0 Parent=GSCOCT00032928001 | |
| 63160 chr11 manual_curation CDS 25257996 25258236 . - 2 Parent=GSCOCT00032928001 | |
| 63161 chr11 manual_curation CDS 25257148 25257922 . - 0 Parent=GSCOCT00032928001 | |
| 63162 chr11 manual_curation CDS 25256093 25256274 . - 1 Parent=GSCOCT00032928001 | |
| 63163 chr11 manual_curation CDS 25254552 25254655 . - 0 Parent=GSCOCT00032928001 | |
| 63164 chr11 manual_curation CDS 25254255 25254456 . - 2 Parent=GSCOCT00032928001 | |
| 63165 chr11 manual_curation gene 25289858 25294804 . + . ID=GSCOCG00032927001;Name=Cc11_g08050 | |
| 63166 chr11 manual_curation mRNA 25289858 25294804 . + . ID=GSCOCT00032927001;Parent=GSCOCG00032927001;Name=Cc11_g08050 | |
| 63167 chr11 manual_curation polypeptide 25289998 25294532 . + . ID=GSCOCP00032927001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR000490,InterPro:IPR012946,InterPro:IPR013781,InterPro:IPR017853,PFAM:PF00332,PFAM:PF07983,PROSITE:PS00587,SMART:SM00768,SUPERFAMILY:SSF51445,SwissProt:O65399,SwissProt:Q9C7U5,SwissProt:Q9ZU91,TAIR:AT1G11820.2,TAIR:AT1G66250.1,TAIR:AT2G01630.1,TrEMBL:B9HW33,TrEMBL:B9SP53,TrEMBL:D7T8M9;Derives_from=GSCOCT00032927001;Name=Cc11_g08050;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0043169,CC_EC_number:3.2.1.39,PRODUCT:Glucan endo-1%2C3-beta-glucosidase 3,CC_functional_completeness:complete,CC_gene:At2g01630,CC_gene:At1g66250,CC_gene:At1g11820;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032927001~ Glucan endo-1%2C3-beta-glucosidase 3~ At2g01630~ complete;original_location=complement(join(6052584..6052668%2C6048962..6050215%2C6048423..6048450%2C6048134..6048290));owner=coffea | |
| 63168 chr11 manual_curation exon 25294376 25294804 . + . Parent=GSCOCT00032927001 | |
| 63169 chr11 manual_curation exon 25294216 25294243 . + . Parent=GSCOCT00032927001 | |
| 63170 chr11 manual_curation exon 25292451 25293704 . + . Parent=GSCOCT00032927001 | |
| 63171 chr11 manual_curation exon 25289858 25290082 . + . Parent=GSCOCT00032927001 | |
| 63172 chr11 manual_curation CDS 25294376 25294532 . + 2 Parent=GSCOCT00032927001 | |
| 63173 chr11 manual_curation CDS 25294216 25294243 . + 1 Parent=GSCOCT00032927001 | |
| 63174 chr11 manual_curation CDS 25292451 25293704 . + 1 Parent=GSCOCT00032927001 | |
| 63175 chr11 manual_curation CDS 25289998 25290082 . + 0 Parent=GSCOCT00032927001 | |
| 63176 chr11 manual_curation gene 25295124 25296704 . - . ID=GSCOCG00032926001;Name=Cc11_g08060 | |
| 63177 chr11 manual_curation mRNA 25295124 25296704 . - . ID=GSCOCT00032926001;Parent=GSCOCG00032926001;Name=Cc11_g08060 | |
| 63178 chr11 manual_curation polypeptide 25295258 25296310 . - . ID=GSCOCP00032926001;Dbxref=InterPro:IPR017900,PROSITE:PS00198,SwissProt:Q9LK24,SwissProt:Q9LU91,SwissProt:Q9ZU90,TAIR:AT2G01620.1,TAIR:AT3G26000.1,TAIR:AT3G27290.1,TrEMBL:B9SP54,TrEMBL:F6HFE9,TrEMBL:I1K5P3;Derives_from=GSCOCT00032926001;Name=Cc11_g08060;Ontology_term=CC_evidence_code:ISS,GO:0009055,GO:0051536,CC_EC_number:missing_EC_number,PRODUCT:Putative F-box protein SKIP28,CC_functional_completeness:fragment,CC_gene:SKIP28,CC_gene:SKIP14,CC_gene:At3g27290;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032926001~ Putative F-box protein SKIP28~ SKIP28~ fragment;original_location=join(6046356..6046520%2C6046827..6047408);owner=coffea | |
| 63179 chr11 manual_curation exon 25296146 25296704 . - . Parent=GSCOCT00032926001 | |
| 63180 chr11 manual_curation exon 25295124 25295839 . - . Parent=GSCOCT00032926001 | |
| 63181 chr11 manual_curation CDS 25296146 25296310 . - 0 Parent=GSCOCT00032926001 | |
| 63182 chr11 manual_curation CDS 25295258 25295839 . - 0 Parent=GSCOCT00032926001 | |
| 63183 chr11 manual_curation gene 25297133 25300535 . - . ID=GSCOCG00032925001;Name=Cc11_g08070 | |
| 63184 chr11 manual_curation mRNA 25297133 25300535 . - . ID=GSCOCT00032925001;Parent=GSCOCG00032925001;Name=Cc11_g08070 | |
| 63185 chr11 manual_curation polypeptide 25297404 25300535 . - . ID=GSCOCP00032925001;Dbxref=GENE3D:G3DSA:3.30.740.10,InterPro:IPR001372,PANTHER:PTHR11886,PFAM:PF01221,SUPERFAMILY:SSF54648,SwissProt:Q78P75,SwissProt:Q96FJ2,SwissProt:Q9D0M5,TAIR:AT1G23220.1,TAIR:AT3G16120.1,TAIR:AT5G20110.1,TrEMBL:B9HW35,TrEMBL:C6SVJ0,TrEMBL:I1K5P2;Derives_from=GSCOCT00032925001;Name=Cc11_g08070;Ontology_term=CC_evidence_code:ISS,GO:0003777,GO:0005875,GO:0007017,CC_EC_number:missing_EC_number,PRODUCT:Putative Dynein light chain 2%2C cytoplasmic,CC_functional_completeness:modules,CC_gene:Dynll2,CC_gene:DYNLL2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032925001~ Putative Dynein light chain 2%2C cytoplasmic~ Dynll2~ modules;original_location=join(6042131..6042364%2C6045107..6045262);owner=coffea | |
| 63186 chr11 manual_curation exon 25300302 25300535 . - . Parent=GSCOCT00032925001 | |
| 63187 chr11 manual_curation exon 25297133 25297559 . - . Parent=GSCOCT00032925001 | |
| 63188 chr11 manual_curation CDS 25300302 25300535 . - 0 Parent=GSCOCT00032925001 | |
| 63189 chr11 manual_curation CDS 25297404 25297559 . - 0 Parent=GSCOCT00032925001 | |
| 63190 chr11 manual_curation gene 25305438 25307321 . - . ID=GSCOCG00032923001;Name=Cc11_g08080 | |
| 63191 chr11 manual_curation mRNA 25305438 25307321 . - . ID=GSCOCT00032923001;Parent=GSCOCG00032923001;Name=Cc11_g08080 | |
| 63192 chr11 manual_curation polypeptide 25306583 25307260 . - . ID=GSCOCP00032923001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR006447,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR014778,PFAM:PF00249,SUPERFAMILY:SSF46689,SwissProt:Q700D9,SwissProt:Q9SAK5,TAIR:AT3G04030.3,TAIR:AT5G18240.1,TAIR:AT5G45580.1,TIGRFAMs:TIGR01557,TrEMBL:B9FKV5,TrEMBL:D7L209,TrEMBL:I1JD43;Derives_from=GSCOCT00032923001;Name=Cc11_g08080;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative Myb family transcription factor APL,CC_functional_completeness:fragment,CC_gene:APL,CC_gene:At1g14600;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032923001~ Putative Myb family transcription factor APL~ APL~ fragment;original_location=join(6035406..6035520%2C6035627..6035703%2C6035789..6035852%2C6036016..6036083);owner=coffea | |
| 63193 chr11 manual_curation exon 25307146 25307321 . - . Parent=GSCOCT00032923001 | |
| 63194 chr11 manual_curation exon 25306963 25307039 . - . Parent=GSCOCT00032923001 | |
| 63195 chr11 manual_curation exon 25306814 25306877 . - . Parent=GSCOCT00032923001 | |
| 63196 chr11 manual_curation exon 25305438 25306650 . - . Parent=GSCOCT00032923001 | |
| 63197 chr11 manual_curation CDS 25307146 25307260 . - 0 Parent=GSCOCT00032923001 | |
| 63198 chr11 manual_curation CDS 25306963 25307039 . - 1 Parent=GSCOCT00032923001 | |
| 63199 chr11 manual_curation CDS 25306814 25306877 . - 0 Parent=GSCOCT00032923001 | |
| 63200 chr11 manual_curation CDS 25306583 25306650 . - 1 Parent=GSCOCT00032923001 | |
| 63201 chr11 manual_curation gene 25357664 25359197 . - . ID=GSCOCG00032922001;Name=Cc11_g08090 | |
| 63202 chr11 manual_curation mRNA 25357664 25359197 . - . ID=GSCOCT00032922001;Parent=GSCOCG00032922001;Name=Cc11_g08090 | |
| 63203 chr11 manual_curation polypeptide 25358118 25359089 . - . ID=GSCOCP00032922001;Dbxref=InterPro:IPR006461,PFAM:PF04749,SwissProt:P0CW97,SwissProt:Q9LQU2,SwissProt:Q9LQU4,TAIR:AT1G14870.1,TAIR:AT1G14880.1,TAIR:AT5G35525.1,TIGRFAMs:TIGR01571,TrEMBL:B9HJE4,TrEMBL:B9HW36,TrEMBL:D7T8N2;Derives_from=GSCOCT00032922001;Name=Cc11_g08090;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein PLANT CADMIUM RESISTANCE 2,CC_functional_completeness:modules,CC_gene:PCR2,CC_gene:PCR3,CC_gene:PCR1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032922001~ Protein PLANT CADMIUM RESISTANCE 2~ PCR2~ modules;original_location=join(5983577..5983778%2C5983908..5983979%2C5984161..5984373%2C5984460..5984548);owner=coffea | |
| 63204 chr11 manual_curation exon 25358888 25359197 . - . Parent=GSCOCT00032922001 | |
| 63205 chr11 manual_curation exon 25358687 25358758 . - . Parent=GSCOCT00032922001 | |
| 63206 chr11 manual_curation exon 25358293 25358505 . - . Parent=GSCOCT00032922001 | |
| 63207 chr11 manual_curation exon 25357664 25358206 . - . Parent=GSCOCT00032922001 | |
| 63208 chr11 manual_curation CDS 25358888 25359089 . - 0 Parent=GSCOCT00032922001 | |
| 63209 chr11 manual_curation CDS 25358687 25358758 . - 1 Parent=GSCOCT00032922001 | |
| 63210 chr11 manual_curation CDS 25358293 25358505 . - 1 Parent=GSCOCT00032922001 | |
| 63211 chr11 manual_curation CDS 25358118 25358206 . - 1 Parent=GSCOCT00032922001 | |
| 63212 chr11 manual_curation gene 25369324 25371541 . - . ID=GSCOCG00032921001;Name=Cc11_g08100 | |
| 63213 chr11 manual_curation mRNA 25369324 25371541 . - . ID=GSCOCT00032921001;Parent=GSCOCG00032921001;Name=Cc11_g08100 | |
| 63214 chr11 manual_curation polypeptide 25369489 25371369 . - . ID=GSCOCP00032921001;Dbxref=InterPro:IPR006461,PFAM:PF04749,SwissProt:B6TZ45,SwissProt:P0CW97,SwissProt:Q9LQU4,TAIR:AT1G14870.1,TAIR:AT1G14880.1,TAIR:AT5G35525.1,TIGRFAMs:TIGR01571,TrEMBL:A9PGF0,TrEMBL:B9NIV5,TrEMBL:B9SP58;Derives_from=GSCOCT00032921001;Name=Cc11_g08100;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein PLANT CADMIUM RESISTANCE 2,CC_functional_completeness:modules,CC_gene:PCR2,CC_gene:PCR3,CC_gene:CNR1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032921001~ Protein PLANT CADMIUM RESISTANCE 2~ PCR2~ modules;original_location=join(5971297..5971546%2C5971733..5971804%2C5972151..5972363%2C5973083..5973177);owner=coffea | |
| 63215 chr11 manual_curation exon 25371120 25371541 . - . Parent=GSCOCT00032921001 | |
| 63216 chr11 manual_curation exon 25370862 25370933 . - . Parent=GSCOCT00032921001 | |
| 63217 chr11 manual_curation exon 25370303 25370515 . - . Parent=GSCOCT00032921001 | |
| 63218 chr11 manual_curation exon 25369324 25369583 . - . Parent=GSCOCT00032921001 | |
| 63219 chr11 manual_curation CDS 25371120 25371369 . - 0 Parent=GSCOCT00032921001 | |
| 63220 chr11 manual_curation CDS 25370862 25370933 . - 1 Parent=GSCOCT00032921001 | |
| 63221 chr11 manual_curation CDS 25370303 25370515 . - 1 Parent=GSCOCT00032921001 | |
| 63222 chr11 manual_curation CDS 25369489 25369583 . - 1 Parent=GSCOCT00032921001 | |
| 63223 chr11 manual_curation gene 25379567 25380986 . - . ID=GSCOCG00032920001;Name=Cc11_g08110 | |
| 63224 chr11 manual_curation mRNA 25379567 25380986 . - . ID=GSCOCT00032920001;Parent=GSCOCG00032920001;Name=Cc11_g08110 | |
| 63225 chr11 manual_curation polypeptide 25379704 25380986 . - . ID=GSCOCP00032920001;Dbxref=InterPro:IPR006461,PFAM:PF04749,SwissProt:P0CW97,SwissProt:Q9LQU2,SwissProt:Q9LQU4,TAIR:AT1G14870.1,TAIR:AT1G14880.1,TAIR:AT5G35525.1,TIGRFAMs:TIGR01571,TrEMBL:A9PGF0,TrEMBL:B9SP58,TrEMBL:F6HFF1;Derives_from=GSCOCT00032920001;Name=Cc11_g08110;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein PLANT CADMIUM RESISTANCE 2,CC_functional_completeness:modules,CC_gene:PCR2,CC_gene:PCR3,CC_gene:PCR1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032920001~ Protein PLANT CADMIUM RESISTANCE 2~ PCR2~ modules;original_location=join(5961680..5961905%2C5962400..5962471%2C5962585..5962797%2C5962886..5962962);owner=coffea | |
| 63226 chr11 manual_curation exon 25380761 25380986 . - . Parent=GSCOCT00032920001 | |
| 63227 chr11 manual_curation exon 25380195 25380266 . - . Parent=GSCOCT00032920001 | |
| 63228 chr11 manual_curation exon 25379869 25380081 . - . Parent=GSCOCT00032920001 | |
| 63229 chr11 manual_curation exon 25379567 25379780 . - . Parent=GSCOCT00032920001 | |
| 63230 chr11 manual_curation CDS 25380761 25380986 . - 0 Parent=GSCOCT00032920001 | |
| 63231 chr11 manual_curation CDS 25380195 25380266 . - 1 Parent=GSCOCT00032920001 | |
| 63232 chr11 manual_curation CDS 25379869 25380081 . - 1 Parent=GSCOCT00032920001 | |
| 63233 chr11 manual_curation CDS 25379704 25379780 . - 1 Parent=GSCOCT00032920001 | |
| 63234 chr11 manual_curation gene 25385008 25386523 . - . ID=GSCOCG00032919001;Name=Cc11_g08120 | |
| 63235 chr11 manual_curation mRNA 25385008 25386523 . - . ID=GSCOCT00032919001;Parent=GSCOCG00032919001;Name=Cc11_g08120 | |
| 63236 chr11 manual_curation polypeptide 25385179 25386323 . - . ID=GSCOCP00032919001;Dbxref=InterPro:IPR006461,PFAM:PF04749,SwissProt:P0CW97,SwissProt:Q9LQU2,SwissProt:Q9LQU4,TAIR:AT1G14870.1,TAIR:AT1G14880.1,TAIR:AT5G35525.1,TIGRFAMs:TIGR01571,TrEMBL:B9HJE3,TrEMBL:B9SP58,TrEMBL:B9SP59;Derives_from=GSCOCT00032919001;Name=Cc11_g08120;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein PLANT CADMIUM RESISTANCE 2,CC_functional_completeness:complete,CC_gene:PCR2,CC_gene:PCR3,CC_gene:PCR1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032919001~ Protein PLANT CADMIUM RESISTANCE 2~ PCR2~ complete;original_location=join(5956343..5956463%2C5956893..5956964%2C5957108..5957320%2C5957411..5957487);owner=coffea | |
| 63237 chr11 manual_curation exon 25386203 25386523 . - . Parent=GSCOCT00032919001 | |
| 63238 chr11 manual_curation exon 25385702 25385773 . - . Parent=GSCOCT00032919001 | |
| 63239 chr11 manual_curation exon 25385346 25385558 . - . Parent=GSCOCT00032919001 | |
| 63240 chr11 manual_curation exon 25385008 25385255 . - . Parent=GSCOCT00032919001 | |
| 63241 chr11 manual_curation CDS 25386203 25386323 . - 0 Parent=GSCOCT00032919001 | |
| 63242 chr11 manual_curation CDS 25385702 25385773 . - 1 Parent=GSCOCT00032919001 | |
| 63243 chr11 manual_curation CDS 25385346 25385558 . - 1 Parent=GSCOCT00032919001 | |
| 63244 chr11 manual_curation CDS 25385179 25385255 . - 1 Parent=GSCOCT00032919001 | |
| 63245 chr11 manual_curation gene 25390278 25391174 . + . ID=GSCOCG00032918001;Name=Cc11_g08130 | |
| 63246 chr11 manual_curation mRNA 25390278 25391174 . + . ID=GSCOCT00032918001;Parent=GSCOCG00032918001;Name=Cc11_g08130 | |
| 63247 chr11 manual_curation polypeptide 25390278 25391174 . + . ID=GSCOCP00032918001;Dbxref=InterPro:IPR013210,PFAM:PF08263,SwissProt:C0LGP4,SwissProt:C0LGT6,SwissProt:Q9SD62,TAIR:AT3G47110.1,TAIR:AT3G47570.1,TAIR:AT5G20480.1,TrEMBL:A5BQC8,TrEMBL:B9T2Z9,TrEMBL:F6HBU2;Derives_from=GSCOCT00032918001;Name=Cc11_g08130;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570,CC_functional_completeness:complete,CC_gene:At3g47570,CC_gene:At3g47110,CC_gene:EFR;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032918001~ Putative Probable LRR receptor-like serine/threonine-protein kinase At3g47570~ At3g47570~ complete;original_location=complement(5951492..5952388);owner=coffea | |
| 63248 chr11 manual_curation exon 25390278 25391174 . + . Parent=GSCOCT00032918001 | |
| 63249 chr11 manual_curation CDS 25390278 25391174 . + 0 Parent=GSCOCT00032918001 | |
| 63250 chr11 manual_curation gene 25442404 25444424 . - . ID=GSCOCG00032916001;Name=Cc11_g08140 | |
| 63251 chr11 manual_curation mRNA 25442404 25444424 . - . ID=GSCOCT00032916001;Parent=GSCOCG00032916001;Name=Cc11_g08140 | |
| 63252 chr11 manual_curation polypeptide 25442511 25444378 . - . ID=GSCOCP00032916001;Dbxref=InterPro:IPR006461,PFAM:PF04749,SwissProt:P0CW97,SwissProt:Q9LQU2,SwissProt:Q9LQU4,TAIR:AT1G14870.1,TAIR:AT1G14880.1,TAIR:AT5G35525.1,TIGRFAMs:TIGR01571,TrEMBL:B9HJE3,TrEMBL:F6HFF1,TrEMBL:F6HFF2;Derives_from=GSCOCT00032916001;Name=Cc11_g08140;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein PLANT CADMIUM RESISTANCE 2,CC_functional_completeness:complete,CC_gene:PCR2,CC_gene:PCR3,CC_gene:PCR1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032916001~ Protein PLANT CADMIUM RESISTANCE 2~ PCR2~ complete;original_location=join(5898288..5898435%2C5898743..5898814%2C5898905..5899114%2C5900079..5900155);owner=coffea | |
| 63253 chr11 manual_curation exon 25444231 25444424 . - . Parent=GSCOCT00032916001 | |
| 63254 chr11 manual_curation exon 25443852 25443923 . - . Parent=GSCOCT00032916001 | |
| 63255 chr11 manual_curation exon 25443552 25443761 . - . Parent=GSCOCT00032916001 | |
| 63256 chr11 manual_curation exon 25442404 25442587 . - . Parent=GSCOCT00032916001 | |
| 63257 chr11 manual_curation CDS 25444231 25444378 . - 0 Parent=GSCOCT00032916001 | |
| 63258 chr11 manual_curation CDS 25443852 25443923 . - 1 Parent=GSCOCT00032916001 | |
| 63259 chr11 manual_curation CDS 25443552 25443761 . - 1 Parent=GSCOCT00032916001 | |
| 63260 chr11 manual_curation CDS 25442511 25442587 . - 1 Parent=GSCOCT00032916001 | |
| 63261 chr11 manual_curation gene 25456569 25458306 . - . ID=GSCOCG00032914001;Name=Cc11_g08150 | |
| 63262 chr11 manual_curation mRNA 25456569 25458306 . - . ID=GSCOCT00032914001;Parent=GSCOCG00032914001;Name=Cc11_g08150 | |
| 63263 chr11 manual_curation polypeptide 25456670 25458210 . - . ID=GSCOCP00032914001;Dbxref=InterPro:IPR006461,PFAM:PF04749,SwissProt:D9HP19,SwissProt:D9HP26,SwissProt:Q9LQU4,TAIR:AT1G14870.1,TAIR:AT1G14880.1,TAIR:AT5G35525.1,TIGRFAMs:TIGR01571,TrEMBL:C6SYU2,TrEMBL:F6HFF1,TrEMBL:F6HFF2;Derives_from=GSCOCT00032914001;Name=Cc11_g08150;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Cell number regulator 10,CC_functional_completeness:complete,CC_gene:CNR10,CC_gene:PCR2,CC_gene:CNR3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032914001~ Putative Cell number regulator 10~ CNR10~ complete;original_location=join(5884456..5884534%2C5884670..5884741%2C5884860..5885081%2C5885920..5885996);owner=coffea | |
| 63264 chr11 manual_curation exon 25458132 25458306 . - . Parent=GSCOCT00032914001 | |
| 63265 chr11 manual_curation exon 25457925 25457996 . - . Parent=GSCOCT00032914001 | |
| 63266 chr11 manual_curation exon 25457585 25457806 . - . Parent=GSCOCT00032914001 | |
| 63267 chr11 manual_curation exon 25456569 25456746 . - . Parent=GSCOCT00032914001 | |
| 63268 chr11 manual_curation CDS 25458132 25458210 . - 0 Parent=GSCOCT00032914001 | |
| 63269 chr11 manual_curation CDS 25457925 25457996 . - 1 Parent=GSCOCT00032914001 | |
| 63270 chr11 manual_curation CDS 25457585 25457806 . - 1 Parent=GSCOCT00032914001 | |
| 63271 chr11 manual_curation CDS 25456670 25456746 . - 1 Parent=GSCOCT00032914001 | |
| 63272 chr11 manual_curation gene 25459333 25464749 . - . ID=GSCOCG00032913001;Name=Cc11_g08160 | |
| 63273 chr11 manual_curation mRNA 25459333 25464749 . - . ID=GSCOCT00032913001;Parent=GSCOCG00032913001;Name=Cc11_g08160 | |
| 63274 chr11 manual_curation polypeptide 25459480 25464671 . - . ID=GSCOCP00032913001;Dbxref=GENE3D:G3DSA:1.50.10.10,InterPro:IPR001701,InterPro:IPR008928,InterPro:IPR012341,InterPro:IPR018221,PANTHER:PTHR22298:SF3,PFAM:PF00759,PROSITE:PS00698,SUPERFAMILY:SSF48208,SwissProt:O49296,SwissProt:Q652F9,SwissProt:Q9CAC1,TAIR:AT1G23210.1,TAIR:AT1G70710.1,TAIR:AT4G02290.1,TrEMBL:B9HW38,TrEMBL:B9SP60,TrEMBL:Q42872;Derives_from=GSCOCT00032913001;Name=Cc11_g08160;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,CC_EC_number:3.2.1.4,PRODUCT:Endoglucanase 8,CC_functional_completeness:complete,CC_gene:CEL1,CC_gene:At1g23210,CC_gene:GLU13;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032913001~ Endoglucanase 8~ CEL1~ complete;original_location=join(5877995..5878234%2C5878335..5878742%2C5880203..5880295%2C5880821..5880982%2C5882187..5882298%2C5882474..5882637%2C5882863..5883186);owner=coffea | |
| 63275 chr11 manual_curation exon 25464432 25464749 . - . Parent=GSCOCT00032913001 | |
| 63276 chr11 manual_curation exon 25463924 25464331 . - . Parent=GSCOCT00032913001 | |
| 63277 chr11 manual_curation exon 25462371 25462463 . - . Parent=GSCOCT00032913001 | |
| 63278 chr11 manual_curation exon 25461684 25461845 . - . Parent=GSCOCT00032913001 | |
| 63279 chr11 manual_curation exon 25460368 25460479 . - . Parent=GSCOCT00032913001 | |
| 63280 chr11 manual_curation exon 25460029 25460192 . - . Parent=GSCOCT00032913001 | |
| 63281 chr11 manual_curation exon 25459333 25459803 . - . Parent=GSCOCT00032913001 | |
| 63282 chr11 manual_curation CDS 25464432 25464671 . - 0 Parent=GSCOCT00032913001 | |
| 63283 chr11 manual_curation CDS 25463924 25464331 . - 0 Parent=GSCOCT00032913001 | |
| 63284 chr11 manual_curation CDS 25462371 25462463 . - 0 Parent=GSCOCT00032913001 | |
| 63285 chr11 manual_curation CDS 25461684 25461845 . - 0 Parent=GSCOCT00032913001 | |
| 63286 chr11 manual_curation CDS 25460368 25460479 . - 0 Parent=GSCOCT00032913001 | |
| 63287 chr11 manual_curation CDS 25460029 25460192 . - 1 Parent=GSCOCT00032913001 | |
| 63288 chr11 manual_curation CDS 25459480 25459803 . - 0 Parent=GSCOCT00032913001 | |
| 63289 chr11 manual_curation gene 25480944 25481654 . + . ID=GSCOCG00032911001;Name=Cc11_g08170 | |
| 63290 chr11 manual_curation mRNA 25480944 25481654 . + . ID=GSCOCT00032911001;Parent=GSCOCG00032911001;Name=Cc11_g08170 | |
| 63291 chr11 manual_curation polypeptide 25480944 25481654 . + . ID=GSCOCP00032911001;Dbxref=GENE3D:G3DSA:1.20.140.40,InterPro:IPR006501,PFAM:PF04043,SMART:SM00856,SUPERFAMILY:SSF101148,SwissProt:O04886,SwissProt:P17407,SwissProt:Q9LUL8,TAIR:AT1G14890.1,TAIR:AT1G23205.1,TAIR:AT2G01610.1,TIGRFAMs:TIGR01614,TrEMBL:A5BDK7,TrEMBL:B9HW39,TrEMBL:B9SP61;Derives_from=GSCOCT00032911001;Name=Cc11_g08170;Ontology_term=CC_evidence_code:ISS,GO:0004857,GO:0030599,CC_EC_number:missing_EC_number,PRODUCT:Putative 21 kDa protein,CC_functional_completeness:modules,CC_gene:PME26,CC_gene:PECS-1.1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032911001~ Putative 21 kDa protein~ PME26~ modules;original_location=complement(5861012..5861722);owner=coffea | |
| 63292 chr11 manual_curation exon 25480944 25481654 . + . Parent=GSCOCT00032911001 | |
| 63293 chr11 manual_curation CDS 25480944 25481654 . + 0 Parent=GSCOCT00032911001 | |
| 63294 chr11 manual_curation gene 25500617 25502884 . - . ID=GSCOCG00032910001;Name=Cc11_g08180 | |
| 63295 chr11 manual_curation mRNA 25500617 25502884 . - . ID=GSCOCT00032910001;Parent=GSCOCG00032910001;Name=Cc11_g08180 | |
| 63296 chr11 manual_curation polypeptide 25500617 25502884 . - . ID=GSCOCP00032910001;Dbxref=GENE3D:G3DSA:2.160.20.10,InterPro:IPR000743,InterPro:IPR011050,InterPro:IPR012334,PFAM:PF00295,SUPERFAMILY:SSF51126,SwissProt:Q02096,SwissProt:Q94AJ5,SwissProt:Q9LW07,TAIR:AT1G23460.1,TAIR:AT1G70500.1,TAIR:AT1G80140.1,TrEMBL:B9IKW4,TrEMBL:D7SIG2,TrEMBL:D7SIG3;Derives_from=GSCOCT00032910001;Name=Cc11_g08180;Ontology_term=CC_evidence_code:ISS,GO:0004650,GO:0005975,CC_EC_number:3.2.1.15,PRODUCT:Putative Probable polygalacturonase At1g80170,CC_functional_completeness:fragment,CC_gene:At1g80170,CC_gene:At3g15720;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032910001~ Putative Probable polygalacturonase At1g80170~ At1g80170~ fragment;original_location=join(5839782..5839973%2C5840143..5840283%2C5840454..5840574%2C5841381..5841387%2C5841437..5841545%2C5841690..5841803%2C5841975..5842049);owner=coffea | |
| 63297 chr11 manual_curation exon 25502693 25502884 . - . Parent=GSCOCT00032910001 | |
| 63298 chr11 manual_curation exon 25502383 25502523 . - . Parent=GSCOCT00032910001 | |
| 63299 chr11 manual_curation exon 25502092 25502212 . - . Parent=GSCOCT00032910001 | |
| 63300 chr11 manual_curation exon 25501279 25501285 . - . Parent=GSCOCT00032910001 | |
| 63301 chr11 manual_curation exon 25501121 25501229 . - . Parent=GSCOCT00032910001 | |
| 63302 chr11 manual_curation exon 25500863 25500976 . - . Parent=GSCOCT00032910001 | |
| 63303 chr11 manual_curation exon 25500617 25500691 . - . Parent=GSCOCT00032910001 | |
| 63304 chr11 manual_curation CDS 25502693 25502884 . - 0 Parent=GSCOCT00032910001 | |
| 63305 chr11 manual_curation CDS 25502383 25502523 . - 0 Parent=GSCOCT00032910001 | |
| 63306 chr11 manual_curation CDS 25502092 25502212 . - 0 Parent=GSCOCT00032910001 | |
| 63307 chr11 manual_curation CDS 25501279 25501285 . - 1 Parent=GSCOCT00032910001 | |
| 63308 chr11 manual_curation CDS 25501121 25501229 . - 2 Parent=GSCOCT00032910001 | |
| 63309 chr11 manual_curation CDS 25500863 25500976 . - 0 Parent=GSCOCT00032910001 | |
| 63310 chr11 manual_curation CDS 25500617 25500691 . - 0 Parent=GSCOCT00032910001 | |
| 63311 chr11 manual_curation gene 25515391 25517820 . + . ID=GSCOCG00032909001;Name=Cc11_g08190 | |
| 63312 chr11 manual_curation mRNA 25515391 25517820 . + . ID=GSCOCT00032909001;Parent=GSCOCG00032909001;Name=Cc11_g08190 | |
| 63313 chr11 manual_curation polypeptide 25515391 25517604 . + . ID=GSCOCP00032909001;Dbxref=GENE3D:G3DSA:1.20.140.40,GENE3D:G3DSA:2.160.20.10,InterPro:IPR000070,InterPro:IPR006501,InterPro:IPR011050,InterPro:IPR012334,PFAM:PF01095,PFAM:PF04043,SMART:SM00856,SUPERFAMILY:SSF101148,SUPERFAMILY:SSF51126,SwissProt:O04887,SwissProt:O22149,SwissProt:O49298,TAIR:AT1G23200.1,TAIR:AT2G45220.1,TAIR:AT5G51490.1,TIGRFAMs:TIGR01614,TrEMBL:B9HW40,TrEMBL:B9SP63,TrEMBL:F6HFF6;Derives_from=GSCOCT00032909001;Name=Cc11_g08190;Ontology_term=CC_evidence_code:ISS,GO:0004857,GO:0005618,GO:0030599,GO:0042545,CC_EC_number:3.1.1.11,PRODUCT:Pectinesterase 2,CC_functional_completeness:complete,CC_gene:PECS-2.1,CC_gene:PME6,CC_gene:PME17;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032909001~ Pectinesterase 2~ PECS-2.1~ complete;original_location=complement(join(5826372..5827275%2C5825062..5825753));owner=coffea | |
| 63314 chr11 manual_curation exon 25516913 25517820 . + . Parent=GSCOCT00032909001 | |
| 63315 chr11 manual_curation exon 25515391 25516294 . + . Parent=GSCOCT00032909001 | |
| 63316 chr11 manual_curation CDS 25516913 25517604 . + 1 Parent=GSCOCT00032909001 | |
| 63317 chr11 manual_curation CDS 25515391 25516294 . + 0 Parent=GSCOCT00032909001 | |
| 63318 chr11 manual_curation gene 25525017 25533690 . - . ID=GSCOCG00032908001;Name=Cc11_g08200 | |
| 63319 chr11 manual_curation mRNA 25525017 25533690 . - . ID=GSCOCT00032908001;Parent=GSCOCG00032908001;Name=Cc11_g08200 | |
| 63320 chr11 manual_curation polypeptide 25525372 25533349 . - . ID=GSCOCP00032908001;Dbxref=GENE3D:G3DSA:3.40.120.10,InterPro:IPR005841,InterPro:IPR005843,InterPro:IPR005844,InterPro:IPR005845,InterPro:IPR005846,InterPro:IPR016055,InterPro:IPR016066,PFAM:PF00408,PFAM:PF02878,PFAM:PF02879,PFAM:PF02880,PRINTS:PR00509,PROSITE:PS00710,SUPERFAMILY:SSF53738,SwissProt:Q9M4G4,SwissProt:Q9SM60,SwissProt:Q9ZSQ4,TAIR:AT1G23190.1,TAIR:AT1G70730.3,TAIR:AT5G51820.1,TrEMBL:B9HW41,TrEMBL:B9SP64,TrEMBL:F6HFF7;Derives_from=GSCOCT00032908001;Name=Cc11_g08200;Ontology_term=CC_evidence_code:ISS,GO:0000287,GO:0005975,CC_EC_number:5.4.2.2,PRODUCT:Phosphoglucomutase%2C cytoplasmic,CC_functional_completeness:complete,CC_gene:PGM1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032908001~ Phosphoglucomutase%2C cytoplasmic~ PGM1~ complete;original_location=join(5809317..5809397%2C5809974..5810055%2C5810921..5810976%2C5811585..5811698%2C5811814..5811876%2C5812924..5813043%2C5813137..5813237%2C5813810..5813869%2C5813972..5814071%2C5814197..5814354%2C5814431..5814526%2C5814762..5814825%2C5814990..5815071%2C5815184..5815359%2C5815495..5815571%2C5816670..5816802%2C5817016..5817132%2C5817223..5817294);owner=coffea | |
| 63321 chr11 manual_curation exon 25533511 25533690 . - . Parent=GSCOCT00032908001 | |
| 63322 chr11 manual_curation exon 25533269 25533394 . - . Parent=GSCOCT00032908001 | |
| 63323 chr11 manual_curation exon 25532611 25532692 . - . Parent=GSCOCT00032908001 | |
| 63324 chr11 manual_curation exon 25531690 25531745 . - . Parent=GSCOCT00032908001 | |
| 63325 chr11 manual_curation exon 25530968 25531081 . - . Parent=GSCOCT00032908001 | |
| 63326 chr11 manual_curation exon 25530790 25530852 . - . Parent=GSCOCT00032908001 | |
| 63327 chr11 manual_curation exon 25529623 25529742 . - . Parent=GSCOCT00032908001 | |
| 63328 chr11 manual_curation exon 25529429 25529529 . - . Parent=GSCOCT00032908001 | |
| 63329 chr11 manual_curation exon 25528797 25528856 . - . Parent=GSCOCT00032908001 | |
| 63330 chr11 manual_curation exon 25528595 25528694 . - . Parent=GSCOCT00032908001 | |
| 63331 chr11 manual_curation exon 25528312 25528469 . - . Parent=GSCOCT00032908001 | |
| 63332 chr11 manual_curation exon 25528140 25528235 . - . Parent=GSCOCT00032908001 | |
| 63333 chr11 manual_curation exon 25527841 25527904 . - . Parent=GSCOCT00032908001 | |
| 63334 chr11 manual_curation exon 25527595 25527676 . - . Parent=GSCOCT00032908001 | |
| 63335 chr11 manual_curation exon 25527307 25527482 . - . Parent=GSCOCT00032908001 | |
| 63336 chr11 manual_curation exon 25527095 25527171 . - . Parent=GSCOCT00032908001 | |
| 63337 chr11 manual_curation exon 25525864 25525996 . - . Parent=GSCOCT00032908001 | |
| 63338 chr11 manual_curation exon 25525534 25525650 . - . Parent=GSCOCT00032908001 | |
| 63339 chr11 manual_curation exon 25525017 25525443 . - . Parent=GSCOCT00032908001 | |
| 63340 chr11 manual_curation CDS 25533269 25533349 . - 0 Parent=GSCOCT00032908001 | |
| 63341 chr11 manual_curation CDS 25532611 25532692 . - 0 Parent=GSCOCT00032908001 | |
| 63342 chr11 manual_curation CDS 25531690 25531745 . - 1 Parent=GSCOCT00032908001 | |
| 63343 chr11 manual_curation CDS 25530968 25531081 . - 0 Parent=GSCOCT00032908001 | |
| 63344 chr11 manual_curation CDS 25530790 25530852 . - 0 Parent=GSCOCT00032908001 | |
| 63345 chr11 manual_curation CDS 25529623 25529742 . - 0 Parent=GSCOCT00032908001 | |
| 63346 chr11 manual_curation CDS 25529429 25529529 . - 0 Parent=GSCOCT00032908001 | |
| 63347 chr11 manual_curation CDS 25528797 25528856 . - 2 Parent=GSCOCT00032908001 | |
| 63348 chr11 manual_curation CDS 25528595 25528694 . - 2 Parent=GSCOCT00032908001 | |
| 63349 chr11 manual_curation CDS 25528312 25528469 . - 0 Parent=GSCOCT00032908001 | |
| 63350 chr11 manual_curation CDS 25528140 25528235 . - 2 Parent=GSCOCT00032908001 | |
| 63351 chr11 manual_curation CDS 25527841 25527904 . - 2 Parent=GSCOCT00032908001 | |
| 63352 chr11 manual_curation CDS 25527595 25527676 . - 0 Parent=GSCOCT00032908001 | |
| 63353 chr11 manual_curation CDS 25527307 25527482 . - 1 Parent=GSCOCT00032908001 | |
| 63354 chr11 manual_curation CDS 25527095 25527171 . - 0 Parent=GSCOCT00032908001 | |
| 63355 chr11 manual_curation CDS 25525864 25525996 . - 2 Parent=GSCOCT00032908001 | |
| 63356 chr11 manual_curation CDS 25525534 25525650 . - 0 Parent=GSCOCT00032908001 | |
| 63357 chr11 manual_curation CDS 25525372 25525443 . - 0 Parent=GSCOCT00032908001 | |
| 63358 chr11 manual_curation gene 25539562 25541119 . - . ID=GSCOCG00032907001;Name=Cc11_g08210 | |
| 63359 chr11 manual_curation mRNA 25539562 25541119 . - . ID=GSCOCT00032907001;Parent=GSCOCG00032907001;Name=Cc11_g08210 | |
| 63360 chr11 manual_curation polypeptide 25539838 25540882 . - . ID=GSCOCP00032907001;Dbxref=GENE3D:G3DSA:1.10.10.10,InterPro:IPR000116,InterPro:IPR005818,InterPro:IPR011991,InterPro:IPR017956,InterPro:IPR020478,PFAM:PF00538,PRINTS:PR00929,PRINTS:PR00930,SMART:SM00384,SMART:SM00526,SwissProt:Q00423,SwissProt:Q10370,TAIR:AT1G14900.1,TAIR:AT1G48620.1,TAIR:AT3G18035.1,TrEMBL:B9HJD9,TrEMBL:D7KCK8,TrEMBL:Q9SEH2;Derives_from=GSCOCT00032907001;Name=Cc11_g08210;Ontology_term=CC_evidence_code:ISS,GO:0000785,GO:0000786,GO:0003677,GO:0005634,GO:0006334,CC_EC_number:missing_EC_number,PRODUCT:HMG-Y-related protein A,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032907001~ HMG-Y-related protein A~ unknown_gene~ complete;original_location=join(5801784..5801894%2C5802319..5802828);owner=coffea | |
| 63361 chr11 manual_curation exon 25540772 25541119 . - . Parent=GSCOCT00032907001 | |
| 63362 chr11 manual_curation exon 25539562 25540347 . - . Parent=GSCOCT00032907001 | |
| 63363 chr11 manual_curation CDS 25540772 25540882 . - 0 Parent=GSCOCT00032907001 | |
| 63364 chr11 manual_curation CDS 25539838 25540347 . - 0 Parent=GSCOCT00032907001 | |
| 63365 chr11 manual_curation gene 25543033 25547605 . - . ID=GSCOCG00032906001;Name=Cc11_g08220 | |
| 63366 chr11 manual_curation mRNA 25543033 25547605 . - . ID=GSCOCT00032906001;Parent=GSCOCG00032906001;Name=Cc11_g08220 | |
| 63367 chr11 manual_curation polypeptide 25543423 25547493 . - . ID=GSCOCP00032906001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR020635,PFAM:PF07714,PROFILE:PS50011,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:O23081,SwissProt:Q8GYA4,SwissProt:Q9M0X5,TAIR:AT1G70740.1,TAIR:AT4G05200.1,TAIR:AT4G23180.1,TrEMBL:A5AT33,TrEMBL:B9HW43,TrEMBL:D7T8P5;Derives_from=GSCOCT00032906001;Name=Cc11_g08220;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Cysteine-rich receptor-like protein kinase 25,CC_functional_completeness:fragment,CC_gene:CRK10,CC_gene:CRK25,CC_gene:CRK41;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032906001~ Putative Cysteine-rich receptor-like protein kinase 25~ CRK10~ fragment;original_location=join(5795173..5795236%2C5795371..5795507%2C5795745..5795955%2C5797445..5797679%2C5797827..5797977%2C5798839..5799243);owner=coffea | |
| 63368 chr11 manual_curation exon 25547430 25547605 . - . Parent=GSCOCT00032906001 | |
| 63369 chr11 manual_curation exon 25547159 25547295 . - . Parent=GSCOCT00032906001 | |
| 63370 chr11 manual_curation exon 25546711 25546921 . - . Parent=GSCOCT00032906001 | |
| 63371 chr11 manual_curation exon 25544987 25545221 . - . Parent=GSCOCT00032906001 | |
| 63372 chr11 manual_curation exon 25544689 25544839 . - . Parent=GSCOCT00032906001 | |
| 63373 chr11 manual_curation exon 25543033 25543827 . - . Parent=GSCOCT00032906001 | |
| 63374 chr11 manual_curation CDS 25547430 25547493 . - 0 Parent=GSCOCT00032906001 | |
| 63375 chr11 manual_curation CDS 25547159 25547295 . - 1 Parent=GSCOCT00032906001 | |
| 63376 chr11 manual_curation CDS 25546711 25546921 . - 0 Parent=GSCOCT00032906001 | |
| 63377 chr11 manual_curation CDS 25544987 25545221 . - 1 Parent=GSCOCT00032906001 | |
| 63378 chr11 manual_curation CDS 25544689 25544839 . - 2 Parent=GSCOCT00032906001 | |
| 63379 chr11 manual_curation CDS 25543423 25543827 . - 0 Parent=GSCOCT00032906001 | |
| 63380 chr11 manual_curation gene 25562361 25565528 . - . ID=GSCOCG00032904001;Name=Cc11_g08230 | |
| 63381 chr11 manual_curation mRNA 25562361 25565528 . - . ID=GSCOCT00032904001;Parent=GSCOCG00032904001;Name=Cc11_g08230 | |
| 63382 chr11 manual_curation polypeptide 25562361 25565327 . - . ID=GSCOCP00032904001;Dbxref=InterPro:IPR007656,PFAM:PF04576,TAIR:AT1G08800.1,TAIR:AT1G70750.1,TAIR:AT5G16720.1,TrEMBL:B9SP67,TrEMBL:F6HFF8,TrEMBL:I1K3D8;Derives_from=GSCOCT00032904001;Name=Cc11_g08230;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032904001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=join(5777339..5777670%2C5777746..5778695%2C5778816..5778998%2C5779117..5780204%2C5780270..5780305);owner=coffea | |
| 63383 chr11 manual_curation exon 25564996 25565528 . - . Parent=GSCOCT00032904001 | |
| 63384 chr11 manual_curation exon 25563971 25564920 . - . Parent=GSCOCT00032904001 | |
| 63385 chr11 manual_curation exon 25563668 25563850 . - . Parent=GSCOCT00032904001 | |
| 63386 chr11 manual_curation exon 25562462 25563549 . - . Parent=GSCOCT00032904001 | |
| 63387 chr11 manual_curation exon 25562361 25562396 . - . Parent=GSCOCT00032904001 | |
| 63388 chr11 manual_curation CDS 25564996 25565327 . - 0 Parent=GSCOCT00032904001 | |
| 63389 chr11 manual_curation CDS 25563971 25564920 . - 2 Parent=GSCOCT00032904001 | |
| 63390 chr11 manual_curation CDS 25563668 25563850 . - 1 Parent=GSCOCT00032904001 | |
| 63391 chr11 manual_curation CDS 25562462 25563549 . - 1 Parent=GSCOCT00032904001 | |
| 63392 chr11 manual_curation CDS 25562361 25562396 . - 0 Parent=GSCOCT00032904001 | |
| 63393 chr11 manual_curation gene 25574977 25581977 . - . ID=GSCOCG00032903001;Name=Cc11_g08240 | |
| 63394 chr11 manual_curation mRNA 25574977 25581977 . - . ID=GSCOCT00032903001;Parent=GSCOCG00032903001;Name=Cc11_g08240 | |
| 63395 chr11 manual_curation polypeptide 25575340 25581762 . - . ID=GSCOCP00032903001;Dbxref=GENE3D:G3DSA:1.20.58.150,GENE3D:G3DSA:1.25.40.90,InterPro:IPR008942,InterPro:IPR011417,InterPro:IPR013809,InterPro:IPR014712,PFAM:PF07651,PROFILE:PS50942,SMART:SM00273,SUPERFAMILY:SSF48464,SwissProt:P94017,SwissProt:Q8LBH2,SwissProt:Q9LVD8,TAIR:AT1G14910.1,TAIR:AT2G01600.1,TAIR:AT5G57200.1,TrEMBL:B9HJD6,TrEMBL:D7T8P7,TrEMBL:G8Z257;Derives_from=GSCOCT00032903001;Name=Cc11_g08240;Ontology_term=CC_evidence_code:ISS,GO:0005543,GO:0005545,GO:0030118,GO:0030276,GO:0048268,CC_EC_number:missing_EC_number,PRODUCT:Putative clathrin assembly protein At2g01600,CC_functional_completeness:complete,CC_gene:At2g01600,CC_gene:At1g14910,CC_gene:At5g57200;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032903001~ Putative clathrin assembly protein At2g01600~ At2g01600~ complete;original_location=join(5760904..5760993%2C5761090..5761159%2C5761574..5761671%2C5763403..5763541%2C5763691..5763818%2C5764551..5764643%2C5764789..5764839%2C5765255..5765320%2C5765414..5765479%2C5765608..5765688%2C5765782..5765862%2C5765957..5766127%2C5766230..5766305%2C5766402..5766514%2C5766973..5767326);owner=coffea | |
| 63396 chr11 manual_curation exon 25581673 25581977 . - . Parent=GSCOCT00032903001 | |
| 63397 chr11 manual_curation exon 25581507 25581576 . - . Parent=GSCOCT00032903001 | |
| 63398 chr11 manual_curation exon 25580995 25581092 . - . Parent=GSCOCT00032903001 | |
| 63399 chr11 manual_curation exon 25579125 25579263 . - . Parent=GSCOCT00032903001 | |
| 63400 chr11 manual_curation exon 25578848 25578975 . - . Parent=GSCOCT00032903001 | |
| 63401 chr11 manual_curation exon 25578023 25578115 . - . Parent=GSCOCT00032903001 | |
| 63402 chr11 manual_curation exon 25577827 25577877 . - . Parent=GSCOCT00032903001 | |
| 63403 chr11 manual_curation exon 25577346 25577411 . - . Parent=GSCOCT00032903001 | |
| 63404 chr11 manual_curation exon 25577187 25577252 . - . Parent=GSCOCT00032903001 | |
| 63405 chr11 manual_curation exon 25576978 25577058 . - . Parent=GSCOCT00032903001 | |
| 63406 chr11 manual_curation exon 25576804 25576884 . - . Parent=GSCOCT00032903001 | |
| 63407 chr11 manual_curation exon 25576539 25576709 . - . Parent=GSCOCT00032903001 | |
| 63408 chr11 manual_curation exon 25576361 25576436 . - . Parent=GSCOCT00032903001 | |
| 63409 chr11 manual_curation exon 25576152 25576264 . - . Parent=GSCOCT00032903001 | |
| 63410 chr11 manual_curation exon 25574977 25575693 . - . Parent=GSCOCT00032903001 | |
| 63411 chr11 manual_curation CDS 25581673 25581762 . - 0 Parent=GSCOCT00032903001 | |
| 63412 chr11 manual_curation CDS 25581507 25581576 . - 0 Parent=GSCOCT00032903001 | |
| 63413 chr11 manual_curation CDS 25580995 25581092 . - 1 Parent=GSCOCT00032903001 | |
| 63414 chr11 manual_curation CDS 25579125 25579263 . - 0 Parent=GSCOCT00032903001 | |
| 63415 chr11 manual_curation CDS 25578848 25578975 . - 1 Parent=GSCOCT00032903001 | |
| 63416 chr11 manual_curation CDS 25578023 25578115 . - 0 Parent=GSCOCT00032903001 | |
| 63417 chr11 manual_curation CDS 25577827 25577877 . - 0 Parent=GSCOCT00032903001 | |
| 63418 chr11 manual_curation CDS 25577346 25577411 . - 0 Parent=GSCOCT00032903001 | |
| 63419 chr11 manual_curation CDS 25577187 25577252 . - 0 Parent=GSCOCT00032903001 | |
| 63420 chr11 manual_curation CDS 25576978 25577058 . - 0 Parent=GSCOCT00032903001 | |
| 63421 chr11 manual_curation CDS 25576804 25576884 . - 0 Parent=GSCOCT00032903001 | |
| 63422 chr11 manual_curation CDS 25576539 25576709 . - 0 Parent=GSCOCT00032903001 | |
| 63423 chr11 manual_curation CDS 25576361 25576436 . - 0 Parent=GSCOCT00032903001 | |
| 63424 chr11 manual_curation CDS 25576152 25576264 . - 1 Parent=GSCOCT00032903001 | |
| 63425 chr11 manual_curation CDS 25575340 25575693 . - 0 Parent=GSCOCT00032903001 | |
| 63426 chr11 manual_curation gene 25589026 25591314 . - . ID=GSCOCG00032902001;Name=Cc11_g08250 | |
| 63427 chr11 manual_curation mRNA 25589026 25591314 . - . ID=GSCOCT00032902001;Parent=GSCOCG00032902001;Name=Cc11_g08250 | |
| 63428 chr11 manual_curation polypeptide 25589892 25590149 . - . ID=GSCOCP00032902001;Derives_from=GSCOCT00032902001;Name=Cc11_g08250;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032902001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=5752517..5752774;owner=coffea | |
| 63429 chr11 manual_curation exon 25589026 25591314 . - . Parent=GSCOCT00032902001 | |
| 63430 chr11 manual_curation CDS 25589892 25590149 . - 0 Parent=GSCOCT00032902001 | |
| 63431 chr11 manual_curation gene 25591605 25600474 . - . ID=GSCOCG00032901001;Name=Cc11_g08260 | |
| 63432 chr11 manual_curation mRNA 25591605 25600474 . - . ID=GSCOCT00032901001;Parent=GSCOCG00032901001;Name=Cc11_g08260 | |
| 63433 chr11 manual_curation polypeptide 25591831 25600243 . - . ID=GSCOCP00032901001;Dbxref=GENE3D:G3DSA:1.25.10.10,InterPro:IPR000225,InterPro:IPR011989,InterPro:IPR016024,InterPro:IPR021133,PFAM:PF00514,PROFILE:PS50077,PROFILE:PS50176,SMART:SM00185,SUPERFAMILY:SSF48371,TAIR:AT1G23180.1,TrEMBL:B9HJD4,TrEMBL:B9SP70,TrEMBL:F6HFG1;Derives_from=GSCOCT00032901001;Name=Cc11_g08260;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:ARM repeat superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032901001~ ARM repeat superfamily protein~ unknown_gene~ complete;original_location=join(5742423..5742659%2C5743759..5744109%2C5744200..5744415%2C5745449..5746092%2C5746751..5746847%2C5746930..5746983%2C5747063..5747169%2C5748888..5749093%2C5750198..5750835);owner=coffea | |
| 63434 chr11 manual_curation exon 25600007 25600474 . - . Parent=GSCOCT00032901001 | |
| 63435 chr11 manual_curation exon 25598557 25598907 . - . Parent=GSCOCT00032901001 | |
| 63436 chr11 manual_curation exon 25598251 25598466 . - . Parent=GSCOCT00032901001 | |
| 63437 chr11 manual_curation exon 25596574 25597217 . - . Parent=GSCOCT00032901001 | |
| 63438 chr11 manual_curation exon 25595819 25595915 . - . Parent=GSCOCT00032901001 | |
| 63439 chr11 manual_curation exon 25595683 25595736 . - . Parent=GSCOCT00032901001 | |
| 63440 chr11 manual_curation exon 25595497 25595603 . - . Parent=GSCOCT00032901001 | |
| 63441 chr11 manual_curation exon 25593573 25593778 . - . Parent=GSCOCT00032901001 | |
| 63442 chr11 manual_curation exon 25591605 25592468 . - . Parent=GSCOCT00032901001 | |
| 63443 chr11 manual_curation CDS 25600007 25600243 . - 0 Parent=GSCOCT00032901001 | |
| 63444 chr11 manual_curation CDS 25598557 25598907 . - 0 Parent=GSCOCT00032901001 | |
| 63445 chr11 manual_curation CDS 25598251 25598466 . - 0 Parent=GSCOCT00032901001 | |
| 63446 chr11 manual_curation CDS 25596574 25597217 . - 0 Parent=GSCOCT00032901001 | |
| 63447 chr11 manual_curation CDS 25595819 25595915 . - 2 Parent=GSCOCT00032901001 | |
| 63448 chr11 manual_curation CDS 25595683 25595736 . - 0 Parent=GSCOCT00032901001 | |
| 63449 chr11 manual_curation CDS 25595497 25595603 . - 0 Parent=GSCOCT00032901001 | |
| 63450 chr11 manual_curation CDS 25593573 25593778 . - 2 Parent=GSCOCT00032901001 | |
| 63451 chr11 manual_curation CDS 25591831 25592468 . - 1 Parent=GSCOCT00032901001 | |
| 63452 chr11 manual_curation gene 25601486 25603308 . + . ID=GSCOCG00032900001;Name=Cc11_g08270 | |
| 63453 chr11 manual_curation mRNA 25601486 25603308 . + . ID=GSCOCT00032900001;Parent=GSCOCG00032900001;Name=Cc11_g08270 | |
| 63454 chr11 manual_curation polypeptide 25601673 25603157 . + . ID=GSCOCP00032900001;Dbxref=InterPro:IPR019654,PFAM:PF10716,TAIR:AT1G70760.1,TrEMBL:B9HW46,TrEMBL:B9SP72,TrEMBL:D7T8Q0;Derives_from=GSCOCT00032900001;Name=Cc11_g08270;Ontology_term=CC_evidence_code:ISS,GO:0055114,CC_EC_number:missing_EC_number,PRODUCT:inorganic carbon transport protein-related,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032900001~ inorganic carbon transport protein-related~ unknown_gene~ complete;original_location=complement(join(5740871..5740993%2C5740653..5740742%2C5740460..5740567%2C5740259..5740353%2C5739509..5739656));owner=coffea | |
| 63455 chr11 manual_curation exon 25603010 25603308 . + . Parent=GSCOCT00032900001 | |
| 63456 chr11 manual_curation exon 25602313 25602407 . + . Parent=GSCOCT00032900001 | |
| 63457 chr11 manual_curation exon 25602099 25602206 . + . Parent=GSCOCT00032900001 | |
| 63458 chr11 manual_curation exon 25601924 25602013 . + . Parent=GSCOCT00032900001 | |
| 63459 chr11 manual_curation exon 25601486 25601795 . + . Parent=GSCOCT00032900001 | |
| 63460 chr11 manual_curation CDS 25603010 25603157 . + 2 Parent=GSCOCT00032900001 | |
| 63461 chr11 manual_curation CDS 25602313 25602407 . + 0 Parent=GSCOCT00032900001 | |
| 63462 chr11 manual_curation CDS 25602099 25602206 . + 0 Parent=GSCOCT00032900001 | |
| 63463 chr11 manual_curation CDS 25601924 25602013 . + 0 Parent=GSCOCT00032900001 | |
| 63464 chr11 manual_curation CDS 25601673 25601795 . + 0 Parent=GSCOCT00032900001 | |
| 63465 chr11 manual_curation gene 25603772 25608770 . - . ID=GSCOCG00032899001;Name=Cc11_g08280 | |
| 63466 chr11 manual_curation mRNA 25603772 25608770 . - . ID=GSCOCT00032899001;Parent=GSCOCG00032899001;Name=Cc11_g08280 | |
| 63467 chr11 manual_curation polypeptide 25604231 25608770 . - . ID=GSCOCP00032899001;Dbxref=InterPro:IPR019308,PFAM:PF10151,SwissProt:A0JMW6,SwissProt:A1L2I9,TAIR:AT1G23170.2,TAIR:AT1G70770.1,TAIR:AT3G11880.1,TrEMBL:A5BH62,TrEMBL:B9SP73,TrEMBL:F6HFG2;Derives_from=GSCOCT00032899001;Name=Cc11_g08280;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function DUF2359%2C transmembrane,CC_functional_completeness:complete,CC_gene:tmem214-a,CC_gene:tmem214-b;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032899001~ Protein of unknown function DUF2359%2C transmembrane~ tmem214-a~ complete;original_location=join(5733896..5734196%2C5734242..5734354%2C5734947..5735084%2C5735417..5735605%2C5735837..5735974%2C5736083..5736210%2C5736306..5736438%2C5736767..5736896%2C5736988..5737067%2C5737939..5738073%2C5738235..5738435);owner=coffea | |
| 63468 chr11 manual_curation exon 25608470 25608770 . - . Parent=GSCOCT00032899001 | |
| 63469 chr11 manual_curation exon 25608312 25608424 . - . Parent=GSCOCT00032899001 | |
| 63470 chr11 manual_curation exon 25607582 25607719 . - . Parent=GSCOCT00032899001 | |
| 63471 chr11 manual_curation exon 25607061 25607249 . - . Parent=GSCOCT00032899001 | |
| 63472 chr11 manual_curation exon 25606692 25606829 . - . Parent=GSCOCT00032899001 | |
| 63473 chr11 manual_curation exon 25606456 25606583 . - . Parent=GSCOCT00032899001 | |
| 63474 chr11 manual_curation exon 25606228 25606360 . - . Parent=GSCOCT00032899001 | |
| 63475 chr11 manual_curation exon 25605770 25605899 . - . Parent=GSCOCT00032899001 | |
| 63476 chr11 manual_curation exon 25605599 25605678 . - . Parent=GSCOCT00032899001 | |
| 63477 chr11 manual_curation exon 25604593 25604727 . - . Parent=GSCOCT00032899001 | |
| 63478 chr11 manual_curation exon 25603772 25604431 . - . Parent=GSCOCT00032899001 | |
| 63479 chr11 manual_curation CDS 25608470 25608770 . - 0 Parent=GSCOCT00032899001 | |
| 63480 chr11 manual_curation CDS 25608312 25608424 . - 1 Parent=GSCOCT00032899001 | |
| 63481 chr11 manual_curation CDS 25607582 25607719 . - 0 Parent=GSCOCT00032899001 | |
| 63482 chr11 manual_curation CDS 25607061 25607249 . - 0 Parent=GSCOCT00032899001 | |
| 63483 chr11 manual_curation CDS 25606692 25606829 . - 0 Parent=GSCOCT00032899001 | |
| 63484 chr11 manual_curation CDS 25606456 25606583 . - 0 Parent=GSCOCT00032899001 | |
| 63485 chr11 manual_curation CDS 25606228 25606360 . - 2 Parent=GSCOCT00032899001 | |
| 63486 chr11 manual_curation CDS 25605770 25605899 . - 0 Parent=GSCOCT00032899001 | |
| 63487 chr11 manual_curation CDS 25605599 25605678 . - 1 Parent=GSCOCT00032899001 | |
| 63488 chr11 manual_curation CDS 25604593 25604727 . - 0 Parent=GSCOCT00032899001 | |
| 63489 chr11 manual_curation CDS 25604231 25604431 . - 0 Parent=GSCOCT00032899001 | |
| 63490 chr11 manual_curation gene 25627790 25629058 . + . ID=GSCOCG00032897001;Name=Cc11_g08290 | |
| 63491 chr11 manual_curation mRNA 25627790 25629058 . + . ID=GSCOCT00032897001;Parent=GSCOCG00032897001;Name=Cc11_g08290 | |
| 63492 chr11 manual_curation polypeptide 25627790 25629058 . + . ID=GSCOCP00032897001;Dbxref=InterPro:IPR005202,PFAM:PF03514,PROFILE:PS50985,SwissProt:Q7Y1B6,SwissProt:Q8S4W7,SwissProt:Q9LQT8,TAIR:AT1G14920.1,TAIR:AT2G01570.1,TAIR:AT3G03450.1,TrEMBL:B9VRA7,TrEMBL:F6HFG4,TrEMBL:G0YVZ6;Derives_from=GSCOCT00032897001;Name=Cc11_g08290;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:DELLA protein GAI1,CC_functional_completeness:fragment,CC_gene:GAI1,CC_gene:GAI;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032897001~ DELLA protein GAI1~ GAI1~ fragment;original_location=complement(join(5713949..5714876%2C5713608..5713897));owner=coffea | |
| 63493 chr11 manual_curation exon 25628769 25629058 . + . Parent=GSCOCT00032897001 | |
| 63494 chr11 manual_curation exon 25627790 25628717 . + . Parent=GSCOCT00032897001 | |
| 63495 chr11 manual_curation CDS 25628769 25629058 . + 1 Parent=GSCOCT00032897001 | |
| 63496 chr11 manual_curation CDS 25627790 25628717 . + 0 Parent=GSCOCT00032897001 | |
| 63497 chr11 manual_curation gene 25666422 25666568 . + . ID=GSCOCG00032894001;Name=Cc11_g08300 | |
| 63498 chr11 manual_curation mRNA 25666422 25666568 . + . ID=GSCOCT00032894001;Parent=GSCOCG00032894001;Name=Cc11_g08300 | |
| 63499 chr11 manual_curation polypeptide 25666422 25666568 . + . ID=GSCOCP00032894001;Derives_from=GSCOCT00032894001;Name=Cc11_g08300;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032894001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(5676098..5676244);owner=coffea | |
| 63500 chr11 manual_curation exon 25666422 25666568 . + . Parent=GSCOCT00032894001 | |
| 63501 chr11 manual_curation CDS 25666422 25666568 . + 0 Parent=GSCOCT00032894001 | |
| 63502 chr11 manual_curation gene 25666671 25667918 . + . ID=GSCOCG00032893001;Name=Cc11_g08310 | |
| 63503 chr11 manual_curation mRNA 25666671 25667918 . + . ID=GSCOCT00032893001;Parent=GSCOCG00032893001;Name=Cc11_g08310 | |
| 63504 chr11 manual_curation polypeptide 25666723 25667678 . + . ID=GSCOCP00032893001;Dbxref=TAIR:AT1G23150.1,TAIR:AT1G70780.1,TAIR:AT5G37730.1,TrEMBL:B9HJD1,TrEMBL:B9SP78,TrEMBL:D7T8Q4;Derives_from=GSCOCT00032893001;Name=Cc11_g08310;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032893001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: mitochondrion%3B EXPRESSED IN: sperm cell%2C male gametophyte%2C pollen tube%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23150.1)%3B Has 143 Blast hits to 143 proteins in 17 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 143%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(5675712..5675943%2C5674988..5675172));owner=coffea | |
| 63505 chr11 manual_curation exon 25667494 25667918 . + . Parent=GSCOCT00032893001 | |
| 63506 chr11 manual_curation exon 25666671 25666954 . + . Parent=GSCOCT00032893001 | |
| 63507 chr11 manual_curation CDS 25667494 25667678 . + 1 Parent=GSCOCT00032893001 | |
| 63508 chr11 manual_curation CDS 25666723 25666954 . + 0 Parent=GSCOCT00032893001 | |
| 63509 chr11 manual_curation gene 25688087 25690513 . + . ID=GSCOCG00032891001;Name=Cc11_g08320 | |
| 63510 chr11 manual_curation mRNA 25688087 25690513 . + . ID=GSCOCT00032891001;Parent=GSCOCG00032891001;Name=Cc11_g08320 | |
| 63511 chr11 manual_curation polypeptide 25688380 25690352 . + . ID=GSCOCP00032891001;Dbxref=InterPro:IPR000008,InterPro:IPR008973,InterPro:IPR018029,PFAM:PF00168,PROFILE:PS50004,SMART:SM00239,SUPERFAMILY:SSF49562,SwissProt:Q8L7A4,SwissProt:Q8LFN9,SwissProt:Q9FVJ3,TAIR:AT1G48590.2,TAIR:AT1G70810.1,TAIR:AT2G01540.1,TrEMBL:B9HJD0,TrEMBL:B9SP79,TrEMBL:F6GSN0;Derives_from=GSCOCT00032891001;Name=Cc11_g08320;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable ADP-ribosylation factor GTPase-activating protein AGD13,CC_functional_completeness:fragment,CC_gene:AGD13,CC_gene:AGD12,CC_gene:AGD11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032891001~ Putative Probable ADP-ribosylation factor GTPase-activating protein AGD13~ AGD13~ fragment;original_location=complement(join(5654191..5654286%2C5652853..5652948%2C5652314..5652601));owner=coffea | |
| 63512 chr11 manual_curation exon 25690065 25690513 . + . Parent=GSCOCT00032891001 | |
| 63513 chr11 manual_curation exon 25689718 25689813 . + . Parent=GSCOCT00032891001 | |
| 63514 chr11 manual_curation exon 25688087 25688475 . + . Parent=GSCOCT00032891001 | |
| 63515 chr11 manual_curation CDS 25690065 25690352 . + 0 Parent=GSCOCT00032891001 | |
| 63516 chr11 manual_curation CDS 25689718 25689813 . + 0 Parent=GSCOCT00032891001 | |
| 63517 chr11 manual_curation CDS 25688380 25688475 . + 0 Parent=GSCOCT00032891001 | |
| 63518 chr11 manual_curation gene 25691645 25696082 . + . ID=GSCOCG00032889001;Name=Cc11_g08330 | |
| 63519 chr11 manual_curation mRNA 25691645 25696082 . + . ID=GSCOCT00032889001;Parent=GSCOCG00032889001;Name=Cc11_g08330 | |
| 63520 chr11 manual_curation polypeptide 25691645 25695798 . + . ID=GSCOCP00032889001;Dbxref=GENE3D:G3DSA:3.40.120.10,InterPro:IPR005841,InterPro:IPR005844,InterPro:IPR005845,InterPro:IPR005846,InterPro:IPR016055,PFAM:PF02878,PFAM:PF02879,PFAM:PF02880,PRINTS:PR00509,SUPERFAMILY:SSF53738,SwissProt:P26276,SwissProt:Q88BD4,SwissProt:Q88C93,TAIR:AT1G70820.1,TAIR:AT5G17530.3,TrEMBL:B9SP81,TrEMBL:D7T8Q7,TrEMBL:I1NDA5;Derives_from=GSCOCT00032889001;Name=Cc11_g08330;Ontology_term=CC_evidence_code:ISS,GO:0005975,CC_EC_number:5.4.2.8,PRODUCT:phosphoglucomutase%2C putative / glucose phosphomutase%2C putative,CC_functional_completeness:complete,CC_gene:algC;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032889001~ phosphoglucomutase%2C putative / glucose phosphomutase%2C putative~ algC~ complete;original_location=complement(join(5650470..5651021%2C5649666..5649929%2C5648306..5648822%2C5647776..5647975%2C5647554..5647666%2C5647056..5647196%2C5646868..5646946));owner=coffea | |
| 63521 chr11 manual_curation exon 25695720 25696082 . + . Parent=GSCOCT00032889001 | |
| 63522 chr11 manual_curation exon 25695470 25695610 . + . Parent=GSCOCT00032889001 | |
| 63523 chr11 manual_curation exon 25695000 25695112 . + . Parent=GSCOCT00032889001 | |
| 63524 chr11 manual_curation exon 25694691 25694890 . + . Parent=GSCOCT00032889001 | |
| 63525 chr11 manual_curation exon 25693844 25694360 . + . Parent=GSCOCT00032889001 | |
| 63526 chr11 manual_curation exon 25692737 25693000 . + . Parent=GSCOCT00032889001 | |
| 63527 chr11 manual_curation exon 25691645 25692196 . + . Parent=GSCOCT00032889001 | |
| 63528 chr11 manual_curation CDS 25695720 25695798 . + 2 Parent=GSCOCT00032889001 | |
| 63529 chr11 manual_curation CDS 25695470 25695610 . + 2 Parent=GSCOCT00032889001 | |
| 63530 chr11 manual_curation CDS 25695000 25695112 . + 0 Parent=GSCOCT00032889001 | |
| 63531 chr11 manual_curation CDS 25694691 25694890 . + 1 Parent=GSCOCT00032889001 | |
| 63532 chr11 manual_curation CDS 25693844 25694360 . + 0 Parent=GSCOCT00032889001 | |
| 63533 chr11 manual_curation CDS 25692737 25693000 . + 0 Parent=GSCOCT00032889001 | |
| 63534 chr11 manual_curation CDS 25691645 25692196 . + 0 Parent=GSCOCT00032889001 | |
| 63535 chr11 manual_curation gene 25703612 25705269 . - . ID=GSCOCG00032888001;Name=Cc11_g08340 | |
| 63536 chr11 manual_curation mRNA 25703612 25705269 . - . ID=GSCOCT00032888001;Parent=GSCOCG00032888001;Name=Cc11_g08340 | |
| 63537 chr11 manual_curation polypeptide 25703961 25705269 . - . ID=GSCOCP00032888001;Dbxref=InterPro:IPR000916,PFAM:PF00407,SwissProt:P85524,SwissProt:Q941R6,SwissProt:Q9SSK9,TAIR:AT1G70830.1,TAIR:AT1G70840.1,TAIR:AT1G70850.1,TrEMBL:B5THI3,TrEMBL:B9HW52,TrEMBL:D6MWR7;Derives_from=GSCOCT00032888001;Name=Cc11_g08340;Ontology_term=CC_evidence_code:ISS,GO:0006952,GO:0009607,CC_EC_number:missing_EC_number,PRODUCT:Putative Kirola,CC_functional_completeness:complete,CC_gene:MLP31,CC_gene:MLP28;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032888001~ Putative Kirola~ MLP31~ complete;original_location=join(5637397..5637457%2C5637684..5637821%2C5638431..5638705);owner=coffea | |
| 63538 chr11 manual_curation exon 25705209 25705269 . - . Parent=GSCOCT00032888001 | |
| 63539 chr11 manual_curation exon 25704845 25704982 . - . Parent=GSCOCT00032888001 | |
| 63540 chr11 manual_curation exon 25703612 25704235 . - . Parent=GSCOCT00032888001 | |
| 63541 chr11 manual_curation CDS 25705209 25705269 . - 0 Parent=GSCOCT00032888001 | |
| 63542 chr11 manual_curation CDS 25704845 25704982 . - 1 Parent=GSCOCT00032888001 | |
| 63543 chr11 manual_curation CDS 25703961 25704235 . - 1 Parent=GSCOCT00032888001 | |
| 63544 chr11 manual_curation gene 25731751 25733203 . - . ID=GSCOCG00032887001;Name=Cc11_g08350 | |
| 63545 chr11 manual_curation mRNA 25731751 25733203 . - . ID=GSCOCT00032887001;Parent=GSCOCG00032887001;Name=Cc11_g08350 | |
| 63546 chr11 manual_curation polypeptide 25732105 25733145 . - . ID=GSCOCP00032887001;Dbxref=InterPro:IPR000916,PFAM:PF00407,SwissProt:P85524,SwissProt:Q941R6,SwissProt:Q9SSK7,TAIR:AT1G70840.1,TAIR:AT1G70850.1,TAIR:AT5G28010.1,TrEMBL:B5THI3,TrEMBL:B9HW52,TrEMBL:D6MWR7;Derives_from=GSCOCT00032887001;Name=Cc11_g08350;Ontology_term=CC_evidence_code:ISS,GO:0006952,GO:0009607,CC_EC_number:missing_EC_number,PRODUCT:Kirola,CC_functional_completeness:complete,CC_gene:MLP34,CC_gene:MLP31;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032887001~ Kirola~ MLP34~ complete;original_location=join(5609521..5609710%2C5610287..5610561);owner=coffea | |
| 63547 chr11 manual_curation exon 25732956 25733203 . - . Parent=GSCOCT00032887001 | |
| 63548 chr11 manual_curation exon 25731751 25732379 . - . Parent=GSCOCT00032887001 | |
| 63549 chr11 manual_curation CDS 25732956 25733145 . - 0 Parent=GSCOCT00032887001 | |
| 63550 chr11 manual_curation CDS 25732105 25732379 . - 1 Parent=GSCOCT00032887001 | |
| 63551 chr11 manual_curation gene 25780949 25782219 . - . ID=GSCOCG00032886001;Name=Cc11_g08360 | |
| 63552 chr11 manual_curation mRNA 25780949 25782219 . - . ID=GSCOCT00032886001;Parent=GSCOCG00032886001;Name=Cc11_g08360 | |
| 63553 chr11 manual_curation polypeptide 25781407 25782172 . - . ID=GSCOCP00032886001;Dbxref=InterPro:IPR000916,PFAM:PF00407,SwissProt:Q941R6,SwissProt:Q9SSK7,SwissProt:Q9SSK9,TAIR:AT1G70830.1,TAIR:AT1G70840.1,TAIR:AT5G28010.1,TrEMBL:A9PJR6,TrEMBL:B9HJC8,TrEMBL:F6HFH2;Derives_from=GSCOCT00032886001;Name=Cc11_g08360;Ontology_term=CC_evidence_code:ISS,GO:0006952,GO:0009607,CC_EC_number:missing_EC_number,PRODUCT:Putative MLP-like protein 28,CC_functional_completeness:complete,CC_gene:MLP28,CC_gene:MLP31,CC_gene:MLP34;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032886001~ Putative MLP-like protein 28~ MLP28~ complete;original_location=join(5560494..5560686%2C5560994..5561259);owner=coffea | |
| 63554 chr11 manual_curation exon 25781980 25782219 . - . Parent=GSCOCT00032886001 | |
| 63555 chr11 manual_curation exon 25780949 25781672 . - . Parent=GSCOCT00032886001 | |
| 63556 chr11 manual_curation CDS 25781980 25782172 . - 0 Parent=GSCOCT00032886001 | |
| 63557 chr11 manual_curation CDS 25781407 25781672 . - 1 Parent=GSCOCT00032886001 | |
| 63558 chr11 manual_curation gene 25786549 25787756 . - . ID=GSCOCG00032885001;Name=Cc11_g08370 | |
| 63559 chr11 manual_curation mRNA 25786549 25787756 . - . ID=GSCOCT00032885001;Parent=GSCOCG00032885001;Name=Cc11_g08370 | |
| 63560 chr11 manual_curation polypeptide 25786831 25787636 . - . ID=GSCOCP00032885001;Dbxref=InterPro:IPR000916,PFAM:PF00407,SwissProt:Q941R6,SwissProt:Q9SSK7,SwissProt:Q9SSK9,TAIR:AT1G70830.1,TAIR:AT1G70840.1,TAIR:AT1G70850.1,TrEMBL:A5AKK0,TrEMBL:B9SJ69,TrEMBL:F6HFH2;Derives_from=GSCOCT00032885001;Name=Cc11_g08370;Ontology_term=CC_evidence_code:ISS,GO:0006952,GO:0009607,CC_EC_number:missing_EC_number,PRODUCT:Putative MLP-like protein 28,CC_functional_completeness:complete,CC_gene:MLP28,CC_gene:MLP34,CC_gene:MLP31;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032885001~ Putative MLP-like protein 28~ MLP28~ complete;original_location=join(5555030..5555219%2C5555564..5555835);owner=coffea | |
| 63561 chr11 manual_curation exon 25786549 25786654 . - . Parent=GSCOCT00032885001 | |
| 63562 chr11 manual_curation exon 25787447 25787756 . - . Parent=GSCOCT00032885001 | |
| 63563 chr11 manual_curation exon 25786791 25787102 . - . Parent=GSCOCT00032885001 | |
| 63564 chr11 manual_curation CDS 25787447 25787636 . - 0 Parent=GSCOCT00032885001 | |
| 63565 chr11 manual_curation CDS 25786831 25787102 . - 1 Parent=GSCOCT00032885001 | |
| 63566 chr11 manual_curation gene 25789813 25791712 . - . ID=GSCOCG00032884001;Name=Cc11_g08380 | |
| 63567 chr11 manual_curation mRNA 25789813 25791712 . - . ID=GSCOCT00032884001;Parent=GSCOCG00032884001;Name=Cc11_g08380 | |
| 63568 chr11 manual_curation polypeptide 25790163 25791712 . - . ID=GSCOCP00032884001;Dbxref=InterPro:IPR000916,PFAM:PF00407,TrEMBL:D7T8R8;Derives_from=GSCOCT00032884001;Name=Cc11_g08380;Ontology_term=CC_evidence_code:ISS,GO:0006952,GO:0009607,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032884001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=join(5550954..5551149%2C5552367..5552503);owner=coffea | |
| 63569 chr11 manual_curation exon 25791517 25791712 . - . Parent=GSCOCT00032884001 | |
| 63570 chr11 manual_curation exon 25789813 25790299 . - . Parent=GSCOCT00032884001 | |
| 63571 chr11 manual_curation CDS 25791517 25791712 . - 0 Parent=GSCOCT00032884001 | |
| 63572 chr11 manual_curation CDS 25790163 25790299 . - 1 Parent=GSCOCT00032884001 | |
| 63573 chr11 manual_curation gene 25795069 25796810 . - . ID=GSCOCG00032883001;Name=Cc11_g08390 | |
| 63574 chr11 manual_curation mRNA 25795069 25796810 . - . ID=GSCOCT00032883001;Parent=GSCOCG00032883001;Name=Cc11_g08390 | |
| 63575 chr11 manual_curation polypeptide 25795191 25796575 . - . ID=GSCOCP00032883001;Dbxref=InterPro:IPR000916,PFAM:PF00407,SwissProt:Q93VR4,SwissProt:Q9SSK5,SwissProt:Q9SSK9,TAIR:AT1G24020.1,TAIR:AT1G70830.1,TAIR:AT1G70890.1,TrEMBL:D7T8R6,TrEMBL:D7T8R8,TrEMBL:F6HFH3;Derives_from=GSCOCT00032883001;Name=Cc11_g08390;Ontology_term=CC_evidence_code:ISS,GO:0006952,GO:0009607,CC_EC_number:missing_EC_number,PRODUCT:Putative MLP-like protein 423,CC_functional_completeness:complete,CC_gene:MLP423,CC_gene:MLP43,CC_gene:MLP28;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032883001~ Putative MLP-like protein 423~ MLP423~ complete;original_location=join(5546091..5546277%2C5547201..5547475);owner=coffea | |
| 63576 chr11 manual_curation exon 25796389 25796810 . - . Parent=GSCOCT00032883001 | |
| 63577 chr11 manual_curation exon 25795069 25795465 . - . Parent=GSCOCT00032883001 | |
| 63578 chr11 manual_curation CDS 25796389 25796575 . - 0 Parent=GSCOCT00032883001 | |
| 63579 chr11 manual_curation CDS 25795191 25795465 . - 1 Parent=GSCOCT00032883001 | |
| 63580 chr11 manual_curation gene 25798595 25803650 . - . ID=GSCOCG00032882001;Name=Cc11_g08400 | |
| 63581 chr11 manual_curation mRNA 25798595 25803650 . - . ID=GSCOCT00032882001;Parent=GSCOCG00032882001;Name=Cc11_g08400 | |
| 63582 chr11 manual_curation polypeptide 25798939 25803585 . - . ID=GSCOCP00032882001;Dbxref=InterPro:IPR000620,PFAM:PF00892,TrEMBL:B9SJ65,TrEMBL:D7SJA5,TrEMBL:D7T8R9;Derives_from=GSCOCT00032882001;Name=Cc11_g08400;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032882001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=join(5539081..5539465%2C5540497..5540738%2C5540848..5540970%2C5541143..5541259%2C5541358..5541540%2C5542740..5542881%2C5543558..5543727);owner=coffea | |
| 63583 chr11 manual_curation exon 25803201 25803650 . - . Parent=GSCOCT00032882001 | |
| 63584 chr11 manual_curation exon 25801928 25802169 . - . Parent=GSCOCT00032882001 | |
| 63585 chr11 manual_curation exon 25801696 25801818 . - . Parent=GSCOCT00032882001 | |
| 63586 chr11 manual_curation exon 25801407 25801523 . - . Parent=GSCOCT00032882001 | |
| 63587 chr11 manual_curation exon 25801126 25801308 . - . Parent=GSCOCT00032882001 | |
| 63588 chr11 manual_curation exon 25799785 25799926 . - . Parent=GSCOCT00032882001 | |
| 63589 chr11 manual_curation exon 25798595 25799108 . - . Parent=GSCOCT00032882001 | |
| 63590 chr11 manual_curation CDS 25803201 25803585 . - 0 Parent=GSCOCT00032882001 | |
| 63591 chr11 manual_curation CDS 25801928 25802169 . - 1 Parent=GSCOCT00032882001 | |
| 63592 chr11 manual_curation CDS 25801696 25801818 . - 0 Parent=GSCOCT00032882001 | |
| 63593 chr11 manual_curation CDS 25801407 25801523 . - 0 Parent=GSCOCT00032882001 | |
| 63594 chr11 manual_curation CDS 25801126 25801308 . - 0 Parent=GSCOCT00032882001 | |
| 63595 chr11 manual_curation CDS 25799785 25799926 . - 0 Parent=GSCOCT00032882001 | |
| 63596 chr11 manual_curation CDS 25798939 25799108 . - 1 Parent=GSCOCT00032882001 | |
| 63597 chr11 manual_curation gene 25808098 25812729 . - . ID=GSCOCG00032881001;Name=Cc11_g08410 | |
| 63598 chr11 manual_curation mRNA 25808098 25812729 . - . ID=GSCOCT00032881001;Parent=GSCOCG00032881001;Name=Cc11_g08410 | |
| 63599 chr11 manual_curation polypeptide 25808352 25812419 . - . ID=GSCOCP00032881001;Dbxref=InterPro:IPR000620,PFAM:PF00892,TrEMBL:B9SJ65,TrEMBL:D7SJA5,TrEMBL:D7T8R9;Derives_from=GSCOCT00032881001;Name=Cc11_g08410;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032881001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=join(5530247..5530631%2C5531512..5531753%2C5531862..5531984%2C5532157..5532273%2C5532372..5532554%2C5533745..5533886%2C5534145..5534314);owner=coffea | |
| 63600 chr11 manual_curation exon 25812035 25812729 . - . Parent=GSCOCT00032881001 | |
| 63601 chr11 manual_curation exon 25810913 25811154 . - . Parent=GSCOCT00032881001 | |
| 63602 chr11 manual_curation exon 25810682 25810804 . - . Parent=GSCOCT00032881001 | |
| 63603 chr11 manual_curation exon 25810393 25810509 . - . Parent=GSCOCT00032881001 | |
| 63604 chr11 manual_curation exon 25810112 25810294 . - . Parent=GSCOCT00032881001 | |
| 63605 chr11 manual_curation exon 25808780 25808921 . - . Parent=GSCOCT00032881001 | |
| 63606 chr11 manual_curation exon 25808098 25808521 . - . Parent=GSCOCT00032881001 | |
| 63607 chr11 manual_curation CDS 25812035 25812419 . - 0 Parent=GSCOCT00032881001 | |
| 63608 chr11 manual_curation CDS 25810913 25811154 . - 1 Parent=GSCOCT00032881001 | |
| 63609 chr11 manual_curation CDS 25810682 25810804 . - 0 Parent=GSCOCT00032881001 | |
| 63610 chr11 manual_curation CDS 25810393 25810509 . - 0 Parent=GSCOCT00032881001 | |
| 63611 chr11 manual_curation CDS 25810112 25810294 . - 0 Parent=GSCOCT00032881001 | |
| 63612 chr11 manual_curation CDS 25808780 25808921 . - 0 Parent=GSCOCT00032881001 | |
| 63613 chr11 manual_curation CDS 25808352 25808521 . - 1 Parent=GSCOCT00032881001 | |
| 63614 chr11 manual_curation gene 25816354 25816981 . + . ID=GSCOCG00032877001;Name=Cc11_g08420 | |
| 63615 chr11 manual_curation mRNA 25816354 25816981 . + . ID=GSCOCT00032877001;Parent=GSCOCG00032877001;Name=Cc11_g08420 | |
| 63616 chr11 manual_curation polypeptide 25816354 25816981 . + . ID=GSCOCP00032877001;Dbxref=GENE3D:G3DSA:3.40.50.1440,InterPro:IPR000217,InterPro:IPR002453,InterPro:IPR003008,InterPro:IPR013838,PFAM:PF00091,PRINTS:PR01161,PRINTS:PR01163,PROSITE:PS00228,SUPERFAMILY:SSF52490,SwissProt:P29513,SwissProt:P29514,SwissProt:P29515,TAIR:AT1G20010.1,TAIR:AT2G29550.1,TAIR:AT5G12250.1,TrEMBL:A9PCH0,TrEMBL:B5U1R1,TrEMBL:B9GWG9;Derives_from=GSCOCT00032877001;Name=Cc11_g08420;Ontology_term=CC_evidence_code:ISS,GO:0005198,GO:0005525,GO:0005874,GO:0007017,GO:0007018,GO:0043234,GO:0051258,CC_EC_number:missing_EC_number,PRODUCT:Tubulin beta-7 chain,CC_functional_completeness:fragment,CC_gene:TUBB7,CC_gene:TUBB6,CC_gene:TUBB5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032877001~ Tubulin beta-7 chain~ TUBB7~ fragment;original_location=complement(join(5526264..5526312%2C5525685..5525926));owner=coffea | |
| 63617 chr11 manual_curation exon 25816740 25816981 . + . Parent=GSCOCT00032877001 | |
| 63618 chr11 manual_curation exon 25816354 25816402 . + . Parent=GSCOCT00032877001 | |
| 63619 chr11 manual_curation CDS 25816740 25816981 . + 1 Parent=GSCOCT00032877001 | |
| 63620 chr11 manual_curation CDS 25816354 25816402 . + 0 Parent=GSCOCT00032877001 | |
| 63621 chr11 manual_curation gene 25822953 25824058 . - . ID=GSCOCG00032876001;Name=Cc11_g08430 | |
| 63622 chr11 manual_curation mRNA 25822953 25824058 . - . ID=GSCOCT00032876001;Parent=GSCOCG00032876001;Name=Cc11_g08430 | |
| 63623 chr11 manual_curation polypeptide 25823325 25823663 . - . ID=GSCOCP00032876001;Dbxref=TAIR:AT2G01505.1;Derives_from=GSCOCT00032876001;Name=Cc11_g08430;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative CLAVATA3/ESR-RELATED 16,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032876001~ Putative CLAVATA3/ESR-RELATED 16~ unknown_gene~ modules;original_location=5519003..5519341;owner=coffea | |
| 63624 chr11 manual_curation exon 25822953 25824058 . - . Parent=GSCOCT00032876001 | |
| 63625 chr11 manual_curation CDS 25823325 25823663 . - 0 Parent=GSCOCT00032876001 | |
| 63626 chr11 manual_curation gene 25830307 25834255 . + . ID=GSCOCG00032875001;Name=Cc11_g08440 | |
| 63627 chr11 manual_curation mRNA 25830307 25834255 . + . ID=GSCOCT00032875001;Parent=GSCOCG00032875001;Name=Cc11_g08440 | |
| 63628 chr11 manual_curation polypeptide 25831438 25834117 . + . ID=GSCOCP00032875001;Dbxref=TAIR:AT1G23110.1,TAIR:AT1G70900.1,TrEMBL:A5BL15,TrEMBL:B9HW55,TrEMBL:B9SJ64;Derives_from=GSCOCT00032875001;Name=Cc11_g08440;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032875001~ unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23110.4)%3B Has 57 Blast hits to 57 proteins in 14 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 57%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ fragment;original_location=complement(join(5511062..5511228%2C5510880..5510935%2C5510693..5510771%2C5510367..5510505%2C5509026..5509139%2C5508549..5508593));owner=coffea | |
| 63629 chr11 manual_curation exon 25830307 25830405 . + . Parent=GSCOCT00032875001 | |
| 63630 chr11 manual_curation exon 25834073 25834255 . + . Parent=GSCOCT00032875001 | |
| 63631 chr11 manual_curation exon 25833527 25833640 . + . Parent=GSCOCT00032875001 | |
| 63632 chr11 manual_curation exon 25832161 25832299 . + . Parent=GSCOCT00032875001 | |
| 63633 chr11 manual_curation exon 25831895 25831973 . + . Parent=GSCOCT00032875001 | |
| 63634 chr11 manual_curation exon 25831731 25831786 . + . Parent=GSCOCT00032875001 | |
| 63635 chr11 manual_curation exon 25831337 25831604 . + . Parent=GSCOCT00032875001 | |
| 63636 chr11 manual_curation CDS 25834073 25834117 . + 0 Parent=GSCOCT00032875001 | |
| 63637 chr11 manual_curation CDS 25833527 25833640 . + 0 Parent=GSCOCT00032875001 | |
| 63638 chr11 manual_curation CDS 25832161 25832299 . + 2 Parent=GSCOCT00032875001 | |
| 63639 chr11 manual_curation CDS 25831895 25831973 . + 1 Parent=GSCOCT00032875001 | |
| 63640 chr11 manual_curation CDS 25831731 25831786 . + 2 Parent=GSCOCT00032875001 | |
| 63641 chr11 manual_curation CDS 25831438 25831604 . + 0 Parent=GSCOCT00032875001 | |
| 63642 chr11 manual_curation gene 25834653 25835284 . + . ID=GSCOCG00032873001;Name=Cc11_g08450 | |
| 63643 chr11 manual_curation mRNA 25834653 25835284 . + . ID=GSCOCT00032873001;Parent=GSCOCG00032873001;Name=Cc11_g08450 | |
| 63644 chr11 manual_curation polypeptide 25834653 25834964 . + . ID=GSCOCP00032873001;Dbxref=TAIR:AT1G23110.1,TAIR:AT1G70900.1,TrEMBL:D7KYF9,TrEMBL:Q6DSU0,TrEMBL:Q9SSK4;Derives_from=GSCOCT00032873001;Name=Cc11_g08450;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032873001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B LOCATED IN: chloroplast%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70900.1)%3B Has 59 Blast hits to 59 proteins in 15 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 59%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ fragment;original_location=complement(join(5507981..5508013%2C5507702..5507905));owner=coffea | |
| 63645 chr11 manual_curation exon 25834761 25835284 . + . Parent=GSCOCT00032873001 | |
| 63646 chr11 manual_curation exon 25834653 25834685 . + . Parent=GSCOCT00032873001 | |
| 63647 chr11 manual_curation CDS 25834761 25834964 . + 0 Parent=GSCOCT00032873001 | |
| 63648 chr11 manual_curation CDS 25834653 25834685 . + 0 Parent=GSCOCT00032873001 | |
| 63649 chr11 manual_curation gene 25836979 25838504 . + . ID=GSCOCG00032872001;Name=Cc11_g08460 | |
| 63650 chr11 manual_curation mRNA 25836979 25838504 . + . ID=GSCOCT00032872001;Parent=GSCOCG00032872001;Name=Cc11_g08460 | |
| 63651 chr11 manual_curation polypeptide 25836979 25838504 . + . ID=GSCOCP00032872001;Dbxref=InterPro:IPR001356,InterPro:IPR009057,PFAM:PF00046,PROFILE:PS50071,SMART:SM00389,SUPERFAMILY:SSF46689,SwissProt:A2XZR3,SwissProt:Q6X7K0,SwissProt:Q9SIB4,TAIR:AT2G28610.1,TAIR:AT3G18010.1,TAIR:AT5G59340.1,TrEMBL:A5BL14,TrEMBL:F6HFH5,TrEMBL:I1K5C4;Derives_from=GSCOCT00032872001;Name=Cc11_g08460;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0043565,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:WOX1,CC_gene:WOX3,CC_gene:WOX2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032872001~ Putative uncharacterized protein~ WOX1~ complete;original_location=complement(join(5505498..5505687%2C5505111..5505425%2C5504935..5505014%2C5504162..5504587));owner=coffea | |
| 63652 chr11 manual_curation exon 25838079 25838504 . + . Parent=GSCOCT00032872001 | |
| 63653 chr11 manual_curation exon 25837652 25837731 . + . Parent=GSCOCT00032872001 | |
| 63654 chr11 manual_curation exon 25837241 25837555 . + . Parent=GSCOCT00032872001 | |
| 63655 chr11 manual_curation exon 25836979 25837168 . + . Parent=GSCOCT00032872001 | |
| 63656 chr11 manual_curation CDS 25838079 25838504 . + 0 Parent=GSCOCT00032872001 | |
| 63657 chr11 manual_curation CDS 25837652 25837731 . + 1 Parent=GSCOCT00032872001 | |
| 63658 chr11 manual_curation CDS 25837241 25837555 . + 1 Parent=GSCOCT00032872001 | |
| 63659 chr11 manual_curation CDS 25836979 25837168 . + 0 Parent=GSCOCT00032872001 | |
| 63660 chr11 manual_curation gene 25850400 25851862 . + . ID=GSCOCG00032870001;Name=Cc11_g08470 | |
| 63661 chr11 manual_curation mRNA 25850400 25851862 . + . ID=GSCOCT00032870001;Parent=GSCOCG00032870001;Name=Cc11_g08470 | |
| 63662 chr11 manual_curation polypeptide 25850515 25851665 . + . ID=GSCOCP00032870001;Dbxref=InterPro:IPR006461,PFAM:PF04749,SwissProt:D9HP19,SwissProt:D9HP26,SwissProt:Q9LQU4,TAIR:AT1G14870.1,TAIR:AT1G14880.1,TAIR:AT5G35525.1,TIGRFAMs:TIGR01571,TrEMBL:C6T4S5,TrEMBL:F6HFF2,TrEMBL:I1KL84;Derives_from=GSCOCT00032870001;Name=Cc11_g08470;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein PLANT CADMIUM RESISTANCE 2,CC_functional_completeness:complete,CC_gene:PCR2,CC_gene:CNR3,CC_gene:CNR10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032870001~ Putative Protein PLANT CADMIUM RESISTANCE 2~ PCR2~ complete;original_location=complement(join(5492085..5492151%2C5491895..5491966%2C5491554..5491775%2C5491001..5491074));owner=coffea | |
| 63663 chr11 manual_curation exon 25851592 25851862 . + . Parent=GSCOCT00032870001 | |
| 63664 chr11 manual_curation exon 25850891 25851112 . + . Parent=GSCOCT00032870001 | |
| 63665 chr11 manual_curation exon 25850700 25850771 . + . Parent=GSCOCT00032870001 | |
| 63666 chr11 manual_curation exon 25850400 25850581 . + . Parent=GSCOCT00032870001 | |
| 63667 chr11 manual_curation CDS 25851592 25851665 . + 1 Parent=GSCOCT00032870001 | |
| 63668 chr11 manual_curation CDS 25850891 25851112 . + 1 Parent=GSCOCT00032870001 | |
| 63669 chr11 manual_curation CDS 25850700 25850771 . + 1 Parent=GSCOCT00032870001 | |
| 63670 chr11 manual_curation CDS 25850515 25850581 . + 0 Parent=GSCOCT00032870001 | |
| 63671 chr11 manual_curation gene 25862381 25863707 . + . ID=GSCOCG00032866001;Name=Cc11_g08480 | |
| 63672 chr11 manual_curation mRNA 25862381 25863707 . + . ID=GSCOCT00032866001;Parent=GSCOCG00032866001;Name=Cc11_g08480 | |
| 63673 chr11 manual_curation polypeptide 25862477 25863453 . + . ID=GSCOCP00032866001;Dbxref=InterPro:IPR006461,PFAM:PF04749,SwissProt:D9HP26,SwissProt:Q9LQU2,SwissProt:Q9LQU4,TAIR:AT1G14870.1,TAIR:AT1G14880.1,TAIR:AT5G35525.1,TIGRFAMs:TIGR01571,TrEMBL:C6T4S5,TrEMBL:F6HFF2,TrEMBL:I1KL84;Derives_from=GSCOCT00032866001;Name=Cc11_g08480;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein PLANT CADMIUM RESISTANCE 2,CC_functional_completeness:complete,CC_gene:PCR2,CC_gene:CNR10,CC_gene:PCR1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032866001~ Putative Protein PLANT CADMIUM RESISTANCE 2~ PCR2~ complete;original_location=complement(join(5480120..5480189%2C5479930..5480001%2C5479583..5479807%2C5479213..5479286));owner=coffea | |
| 63674 chr11 manual_curation exon 25863380 25863707 . + . Parent=GSCOCT00032866001 | |
| 63675 chr11 manual_curation exon 25862859 25863083 . + . Parent=GSCOCT00032866001 | |
| 63676 chr11 manual_curation exon 25862665 25862736 . + . Parent=GSCOCT00032866001 | |
| 63677 chr11 manual_curation exon 25862381 25862546 . + . Parent=GSCOCT00032866001 | |
| 63678 chr11 manual_curation CDS 25863380 25863453 . + 1 Parent=GSCOCT00032866001 | |
| 63679 chr11 manual_curation CDS 25862859 25863083 . + 1 Parent=GSCOCT00032866001 | |
| 63680 chr11 manual_curation CDS 25862665 25862736 . + 1 Parent=GSCOCT00032866001 | |
| 63681 chr11 manual_curation CDS 25862477 25862546 . + 0 Parent=GSCOCT00032866001 | |
| 63682 chr11 manual_curation gene 25865063 25870437 . - . ID=GSCOCG00032865001;Name=Cc11_g08490 | |
| 63683 chr11 manual_curation mRNA 25865063 25870437 . - . ID=GSCOCT00032865001;Parent=GSCOCG00032865001;Name=Cc11_g08490 | |
| 63684 chr11 manual_curation polypeptide 25865510 25870330 . - . ID=GSCOCP00032865001;Dbxref=InterPro:IPR008775,PFAM:PF05721,SwissProt:Q0IIB1,SwissProt:Q5SRE7,SwissProt:Q9DB26,TAIR:AT2G01490.1,TrEMBL:A9PET6,TrEMBL:D7T8S3,TrEMBL:I1KM64;Derives_from=GSCOCT00032865001;Name=Cc11_g08490;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Phytanoyl-CoA dioxygenase domain-containing protein 1,CC_functional_completeness:complete,CC_gene:PHYHD1,CC_gene:Phyhd1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032865001~ Putative Phytanoyl-CoA dioxygenase domain-containing protein 1~ PHYHD1~ complete;original_location=join(5472336..5472390%2C5472524..5472648%2C5472761..5472821%2C5473442..5473510%2C5473595..5473713%2C5474258..5474405%2C5474490..5474634%2C5474777..5474863%2C5477117..5477156);owner=coffea | |
| 63685 chr11 manual_curation exon 25870276 25870437 . - . Parent=GSCOCT00032865001 | |
| 63686 chr11 manual_curation exon 25870018 25870142 . - . Parent=GSCOCT00032865001 | |
| 63687 chr11 manual_curation exon 25869845 25869905 . - . Parent=GSCOCT00032865001 | |
| 63688 chr11 manual_curation exon 25869156 25869224 . - . Parent=GSCOCT00032865001 | |
| 63689 chr11 manual_curation exon 25868953 25869071 . - . Parent=GSCOCT00032865001 | |
| 63690 chr11 manual_curation exon 25868261 25868408 . - . Parent=GSCOCT00032865001 | |
| 63691 chr11 manual_curation exon 25868032 25868176 . - . Parent=GSCOCT00032865001 | |
| 63692 chr11 manual_curation exon 25867803 25867889 . - . Parent=GSCOCT00032865001 | |
| 63693 chr11 manual_curation exon 25865063 25865549 . - . Parent=GSCOCT00032865001 | |
| 63694 chr11 manual_curation CDS 25870276 25870330 . - 0 Parent=GSCOCT00032865001 | |
| 63695 chr11 manual_curation CDS 25870018 25870142 . - 1 Parent=GSCOCT00032865001 | |
| 63696 chr11 manual_curation CDS 25869845 25869905 . - 0 Parent=GSCOCT00032865001 | |
| 63697 chr11 manual_curation CDS 25869156 25869224 . - 1 Parent=GSCOCT00032865001 | |
| 63698 chr11 manual_curation CDS 25868953 25869071 . - 1 Parent=GSCOCT00032865001 | |
| 63699 chr11 manual_curation CDS 25868261 25868408 . - 0 Parent=GSCOCT00032865001 | |
| 63700 chr11 manual_curation CDS 25868032 25868176 . - 1 Parent=GSCOCT00032865001 | |
| 63701 chr11 manual_curation CDS 25867803 25867889 . - 2 Parent=GSCOCT00032865001 | |
| 63702 chr11 manual_curation CDS 25865510 25865549 . - 2 Parent=GSCOCT00032865001 | |
| 63703 chr11 manual_curation gene 25871339 25880272 . - . ID=GSCOCG00032864001;Name=Cc11_g08500 | |
| 63704 chr11 manual_curation mRNA 25871339 25880272 . - . ID=GSCOCT00032864001;Parent=GSCOCG00032864001;Name=Cc11_g08500 | |
| 63705 chr11 manual_curation polypeptide 25871918 25879038 . - . ID=GSCOCP00032864001;Dbxref=InterPro:IPR019378,PFAM:PF10250,SwissProt:Q8W486,TAIR:AT1G14970.1,TAIR:AT1G35510.1,TAIR:AT2G01480.1,TrEMBL:B9HJC2,TrEMBL:B9HW57,TrEMBL:F6HFH6;Derives_from=GSCOCT00032864001;Name=Cc11_g08500;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative DUF246 domain-containing protein At1g04910,CC_functional_completeness:modules,CC_gene:At1g04910;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032864001~ Putative DUF246 domain-containing protein At1g04910~ At1g04910~ modules;original_location=join(5463628..5463993%2C5465500..5465569%2C5466313..5466380%2C5466492..5466580%2C5467275..5467472%2C5467991..5468195%2C5468292..5468459%2C5469614..5469781%2C5469878..5470068%2C5470586..5470748);owner=coffea | |
| 63706 chr11 manual_curation exon 25878673 25880272 . - . Parent=GSCOCT00032864001 | |
| 63707 chr11 manual_curation exon 25877097 25877166 . - . Parent=GSCOCT00032864001 | |
| 63708 chr11 manual_curation exon 25876286 25876353 . - . Parent=GSCOCT00032864001 | |
| 63709 chr11 manual_curation exon 25876086 25876174 . - . Parent=GSCOCT00032864001 | |
| 63710 chr11 manual_curation exon 25875194 25875391 . - . Parent=GSCOCT00032864001 | |
| 63711 chr11 manual_curation exon 25874471 25874675 . - . Parent=GSCOCT00032864001 | |
| 63712 chr11 manual_curation exon 25874207 25874374 . - . Parent=GSCOCT00032864001 | |
| 63713 chr11 manual_curation exon 25872885 25873052 . - . Parent=GSCOCT00032864001 | |
| 63714 chr11 manual_curation exon 25872598 25872788 . - . Parent=GSCOCT00032864001 | |
| 63715 chr11 manual_curation exon 25871339 25872080 . - . Parent=GSCOCT00032864001 | |
| 63716 chr11 manual_curation CDS 25878673 25879038 . - 0 Parent=GSCOCT00032864001 | |
| 63717 chr11 manual_curation CDS 25877097 25877166 . - 0 Parent=GSCOCT00032864001 | |
| 63718 chr11 manual_curation CDS 25876286 25876353 . - 1 Parent=GSCOCT00032864001 | |
| 63719 chr11 manual_curation CDS 25876086 25876174 . - 0 Parent=GSCOCT00032864001 | |
| 63720 chr11 manual_curation CDS 25875194 25875391 . - 2 Parent=GSCOCT00032864001 | |
| 63721 chr11 manual_curation CDS 25874471 25874675 . - 2 Parent=GSCOCT00032864001 | |
| 63722 chr11 manual_curation CDS 25874207 25874374 . - 0 Parent=GSCOCT00032864001 | |
| 63723 chr11 manual_curation CDS 25872885 25873052 . - 0 Parent=GSCOCT00032864001 | |
| 63724 chr11 manual_curation CDS 25872598 25872788 . - 0 Parent=GSCOCT00032864001 | |
| 63725 chr11 manual_curation CDS 25871918 25872080 . - 2 Parent=GSCOCT00032864001 | |
| 63726 chr11 manual_curation gene 25884304 25885655 . - . ID=GSCOCG00032863001;Name=Cc11_g08510 | |
| 63727 chr11 manual_curation mRNA 25884304 25885655 . - . ID=GSCOCT00032863001;Parent=GSCOCG00032863001;Name=Cc11_g08510 | |
| 63728 chr11 manual_curation polypeptide 25884588 25885437 . - . ID=GSCOCP00032863001;Dbxref=GENE3D:G3DSA:2.30.33.40,InterPro:IPR001476,InterPro:IPR011032,InterPro:IPR020818,PANTHER:PTHR10772,PFAM:PF00166,PRINTS:PR00297,SMART:SM00883,SUPERFAMILY:SSF50129,SwissProt:P34893,SwissProt:Q96539,SwissProt:Q9W6X3,TAIR:AT1G14980.1,TAIR:AT1G23100.1,TrEMBL:B9HJC1,TrEMBL:B9HW58,TrEMBL:I1ND96;Derives_from=GSCOCT00032863001;Name=Cc11_g08510;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0005737,GO:0006457,CC_EC_number:missing_EC_number,PRODUCT:10 kDa chaperonin,CC_functional_completeness:complete,CC_gene:CPN10,CC_gene:hspe1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032863001~ 10 kDa chaperonin~ CPN10~ complete;original_location=join(5457229..5457333%2C5457776..5457915%2C5458030..5458078);owner=coffea | |
| 63729 chr11 manual_curation exon 25885333 25885655 . - . Parent=GSCOCT00032863001 | |
| 63730 chr11 manual_curation exon 25884751 25884890 . - . Parent=GSCOCT00032863001 | |
| 63731 chr11 manual_curation exon 25884304 25884636 . - . Parent=GSCOCT00032863001 | |
| 63732 chr11 manual_curation CDS 25885333 25885437 . - 0 Parent=GSCOCT00032863001 | |
| 63733 chr11 manual_curation CDS 25884751 25884890 . - 0 Parent=GSCOCT00032863001 | |
| 63734 chr11 manual_curation CDS 25884588 25884636 . - 2 Parent=GSCOCT00032863001 | |
| 63735 chr11 manual_curation gene 25901331 25907723 . + . ID=GSCOCG00032862001;Name=Cc11_g08520 | |
| 63736 chr11 manual_curation mRNA 25901331 25907723 . + . ID=GSCOCT00032862001;Parent=GSCOCG00032862001;Name=Cc11_g08520 | |
| 63737 chr11 manual_curation polypeptide 25901417 25907435 . + . ID=GSCOCP00032862001;Dbxref=InterPro:IPR001902,InterPro:IPR002645,InterPro:IPR011547,InterPro:IPR018045,PFAM:PF00916,PFAM:PF01740,PROFILE:PS50801,PROSITE:PS01130,SUPERFAMILY:SSF52091,SwissProt:Q9LW86,SwissProt:Q9SV13,SwissProt:Q9SXS2,TAIR:AT1G23090.1,TAIR:AT3G15990.1,TAIR:AT3G51895.1,TIGRFAMs:TIGR00815,TrEMBL:B9HW59,TrEMBL:B9SJ59,TrEMBL:F6HFH7;Derives_from=GSCOCT00032862001;Name=Cc11_g08520;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006810,GO:0008271,GO:0008272,GO:0016020,GO:0016021,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Probable sulfate transporter 3.3,CC_functional_completeness:complete,CC_gene:SULTR3%3B3,CC_gene:SULTR3%3B4,CC_gene:SULTR3%3B1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032862001~ Probable sulfate transporter 3.3~ SULTR3%3B3~ complete;original_location=complement(join(5441001..5441249%2C5440856..5440904%2C5440532..5440739%2C5440229..5440400%2C5439504..5439569%2C5437205..5437318%2C5437007..5437123%2C5436407..5436533%2C5436014..5436300%2C5435647..5435837%2C5435448..5435536%2C5435231..5435334));owner=coffea | |
| 63738 chr11 manual_curation exon 25907332 25907723 . + . Parent=GSCOCT00032862001 | |
| 63739 chr11 manual_curation exon 25907130 25907218 . + . Parent=GSCOCT00032862001 | |
| 63740 chr11 manual_curation exon 25906829 25907019 . + . Parent=GSCOCT00032862001 | |
| 63741 chr11 manual_curation exon 25906366 25906652 . + . Parent=GSCOCT00032862001 | |
| 63742 chr11 manual_curation exon 25906133 25906259 . + . Parent=GSCOCT00032862001 | |
| 63743 chr11 manual_curation exon 25905543 25905659 . + . Parent=GSCOCT00032862001 | |
| 63744 chr11 manual_curation exon 25905348 25905461 . + . Parent=GSCOCT00032862001 | |
| 63745 chr11 manual_curation exon 25903097 25903162 . + . Parent=GSCOCT00032862001 | |
| 63746 chr11 manual_curation exon 25902266 25902437 . + . Parent=GSCOCT00032862001 | |
| 63747 chr11 manual_curation exon 25901927 25902134 . + . Parent=GSCOCT00032862001 | |
| 63748 chr11 manual_curation exon 25901762 25901810 . + . Parent=GSCOCT00032862001 | |
| 63749 chr11 manual_curation exon 25901331 25901665 . + . Parent=GSCOCT00032862001 | |
| 63750 chr11 manual_curation CDS 25907332 25907435 . + 1 Parent=GSCOCT00032862001 | |
| 63751 chr11 manual_curation CDS 25907130 25907218 . + 2 Parent=GSCOCT00032862001 | |
| 63752 chr11 manual_curation CDS 25906829 25907019 . + 0 Parent=GSCOCT00032862001 | |
| 63753 chr11 manual_curation CDS 25906366 25906652 . + 1 Parent=GSCOCT00032862001 | |
| 63754 chr11 manual_curation CDS 25906133 25906259 . + 0 Parent=GSCOCT00032862001 | |
| 63755 chr11 manual_curation CDS 25905543 25905659 . + 0 Parent=GSCOCT00032862001 | |
| 63756 chr11 manual_curation CDS 25905348 25905461 . + 0 Parent=GSCOCT00032862001 | |
| 63757 chr11 manual_curation CDS 25903097 25903162 . + 0 Parent=GSCOCT00032862001 | |
| 63758 chr11 manual_curation CDS 25902266 25902437 . + 2 Parent=GSCOCT00032862001 | |
| 63759 chr11 manual_curation CDS 25901927 25902134 . + 1 Parent=GSCOCT00032862001 | |
| 63760 chr11 manual_curation CDS 25901762 25901810 . + 0 Parent=GSCOCT00032862001 | |
| 63761 chr11 manual_curation CDS 25901417 25901665 . + 0 Parent=GSCOCT00032862001 | |
| 63762 chr11 manual_curation gene 25909334 25913563 . + . ID=GSCOCG00032861001;Name=Cc11_g08530 | |
| 63763 chr11 manual_curation mRNA 25909334 25913563 . + . ID=GSCOCT00032861001;Parent=GSCOCG00032861001;Name=Cc11_g08530 | |
| 63764 chr11 manual_curation polypeptide 25909393 25913563 . + . ID=GSCOCP00032861001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019781,InterPro:IPR019782,PFAM:PF00400,PROFILE:PS50082,PROFILE:PS50294,SMART:SM00320,SUPERFAMILY:SSF50978,SwissProt:Q39221,SwissProt:Q8GYE0,SwissProt:Q9WTV0,TAIR:AT2G01470.1,TAIR:AT5G50550.1,TAIR:AT5G50650.1,TrEMBL:B9HJB9,TrEMBL:B9SJ58,TrEMBL:F6HFH8;Derives_from=GSCOCT00032861001;Name=Cc11_g08530;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative SEC12-like protein 2,CC_functional_completeness:complete,CC_gene:STL2P,CC_gene:PHF1,CC_gene:Preb;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032861001~ Putative SEC12-like protein 2~ STL2P~ complete;original_location=complement(join(5433019..5433273%2C5432728..5432822%2C5432174..5432390%2C5431377..5431468%2C5431137..5431233%2C5430199..5430274%2C5429984..5430104%2C5429404..5429520%2C5429103..5429319));owner=coffea | |
| 63765 chr11 manual_curation exon 25913347 25913563 . + . Parent=GSCOCT00032861001 | |
| 63766 chr11 manual_curation exon 25913146 25913262 . + . Parent=GSCOCT00032861001 | |
| 63767 chr11 manual_curation exon 25912562 25912682 . + . Parent=GSCOCT00032861001 | |
| 63768 chr11 manual_curation exon 25912392 25912467 . + . Parent=GSCOCT00032861001 | |
| 63769 chr11 manual_curation exon 25911433 25911529 . + . Parent=GSCOCT00032861001 | |
| 63770 chr11 manual_curation exon 25911198 25911289 . + . Parent=GSCOCT00032861001 | |
| 63771 chr11 manual_curation exon 25910276 25910492 . + . Parent=GSCOCT00032861001 | |
| 63772 chr11 manual_curation exon 25909844 25909938 . + . Parent=GSCOCT00032861001 | |
| 63773 chr11 manual_curation exon 25909334 25909647 . + . Parent=GSCOCT00032861001 | |
| 63774 chr11 manual_curation CDS 25913347 25913563 . + 2 Parent=GSCOCT00032861001 | |
| 63775 chr11 manual_curation CDS 25913146 25913262 . + 2 Parent=GSCOCT00032861001 | |
| 63776 chr11 manual_curation CDS 25912562 25912682 . + 1 Parent=GSCOCT00032861001 | |
| 63777 chr11 manual_curation CDS 25912392 25912467 . + 0 Parent=GSCOCT00032861001 | |
| 63778 chr11 manual_curation CDS 25911433 25911529 . + 2 Parent=GSCOCT00032861001 | |
| 63779 chr11 manual_curation CDS 25911198 25911289 . + 0 Parent=GSCOCT00032861001 | |
| 63780 chr11 manual_curation CDS 25910276 25910492 . + 2 Parent=GSCOCT00032861001 | |
| 63781 chr11 manual_curation CDS 25909844 25909938 . + 0 Parent=GSCOCT00032861001 | |
| 63782 chr11 manual_curation CDS 25909393 25909647 . + 0 Parent=GSCOCT00032861001 | |
| 63783 chr11 manual_curation gene 25920890 25936604 . - . ID=GSCOCG00032859001;Name=Cc11_g08540 | |
| 63784 chr11 manual_curation mRNA 25920890 25936604 . - . ID=GSCOCT00032859001;Parent=GSCOCG00032859001;Name=Cc11_g08540 | |
| 63785 chr11 manual_curation polypeptide 25921104 25936604 . - . ID=GSCOCP00032859001;Dbxref=InterPro:IPR000764,InterPro:IPR003593,InterPro:IPR006083,PFAM:PF00485,PRINTS:PR00988,SMART:SM00382,SwissProt:B5ZBE2,SwissProt:Q54R62,SwissProt:Q9GNF0,TAIR:AT1G26190.1,TAIR:AT1G73980.1,TAIR:AT2G01460.1,TrEMBL:F4INB4,TrEMBL:F4INB5,TrEMBL:F6HFH9;Derives_from=GSCOCT00032859001;Name=Cc11_g08540;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0008152,GO:0016301,GO:0017111,CC_EC_number:2.7.1.48,PRODUCT:Putative Uridine-cytidine kinase C,CC_functional_completeness:modules,CC_gene:udkC,CC_gene:udkD,CC_gene:udk;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032859001~ Putative Uridine-cytidine kinase C~ udkC~ modules;original_location=join(5406062..5406178%2C5406572..5406684%2C5406797..5406923%2C5407685..5407783%2C5407860..5407928%2C5408090..5408224%2C5408293..5408361%2C5409089..5409144%2C5409266..5409425%2C5410353..5410517%2C5411125..5411209%2C5411506..5411513%2C5413610..5413877%2C5413985..5414079%2C5414201..5414243%2C5414961..5415118%2C5416135..5416245%2C5416612..5416680%2C5416799..5416942%2C5417975..5418049%2C5418128..5418304%2C5418406..5418491%2C5419211..5419265%2C5420830..5420955%2C5421078..5421182%2C5421288..5421404%2C5421497..5421562);owner=coffea | |
| 63786 chr11 manual_curation exon 25936488 25936604 . - . Parent=GSCOCT00032859001 | |
| 63787 chr11 manual_curation exon 25935982 25936094 . - . Parent=GSCOCT00032859001 | |
| 63788 chr11 manual_curation exon 25935743 25935869 . - . Parent=GSCOCT00032859001 | |
| 63789 chr11 manual_curation exon 25934883 25934981 . - . Parent=GSCOCT00032859001 | |
| 63790 chr11 manual_curation exon 25934738 25934806 . - . Parent=GSCOCT00032859001 | |
| 63791 chr11 manual_curation exon 25934442 25934576 . - . Parent=GSCOCT00032859001 | |
| 63792 chr11 manual_curation exon 25934305 25934373 . - . Parent=GSCOCT00032859001 | |
| 63793 chr11 manual_curation exon 25933522 25933577 . - . Parent=GSCOCT00032859001 | |
| 63794 chr11 manual_curation exon 25933241 25933400 . - . Parent=GSCOCT00032859001 | |
| 63795 chr11 manual_curation exon 25932149 25932313 . - . Parent=GSCOCT00032859001 | |
| 63796 chr11 manual_curation exon 25931457 25931541 . - . Parent=GSCOCT00032859001 | |
| 63797 chr11 manual_curation exon 25931153 25931160 . - . Parent=GSCOCT00032859001 | |
| 63798 chr11 manual_curation exon 25928789 25929056 . - . Parent=GSCOCT00032859001 | |
| 63799 chr11 manual_curation exon 25928587 25928681 . - . Parent=GSCOCT00032859001 | |
| 63800 chr11 manual_curation exon 25928423 25928465 . - . Parent=GSCOCT00032859001 | |
| 63801 chr11 manual_curation exon 25927548 25927705 . - . Parent=GSCOCT00032859001 | |
| 63802 chr11 manual_curation exon 25926421 25926531 . - . Parent=GSCOCT00032859001 | |
| 63803 chr11 manual_curation exon 25925986 25926054 . - . Parent=GSCOCT00032859001 | |
| 63804 chr11 manual_curation exon 25925724 25925867 . - . Parent=GSCOCT00032859001 | |
| 63805 chr11 manual_curation exon 25924617 25924691 . - . Parent=GSCOCT00032859001 | |
| 63806 chr11 manual_curation exon 25924362 25924538 . - . Parent=GSCOCT00032859001 | |
| 63807 chr11 manual_curation exon 25924175 25924260 . - . Parent=GSCOCT00032859001 | |
| 63808 chr11 manual_curation exon 25923401 25923455 . - . Parent=GSCOCT00032859001 | |
| 63809 chr11 manual_curation exon 25921711 25921836 . - . Parent=GSCOCT00032859001 | |
| 63810 chr11 manual_curation exon 25921484 25921588 . - . Parent=GSCOCT00032859001 | |
| 63811 chr11 manual_curation exon 25921262 25921378 . - . Parent=GSCOCT00032859001 | |
| 63812 chr11 manual_curation exon 25920890 25921169 . - . Parent=GSCOCT00032859001 | |
| 63813 chr11 manual_curation CDS 25936488 25936604 . - 0 Parent=GSCOCT00032859001 | |
| 63814 chr11 manual_curation CDS 25935982 25936094 . - 0 Parent=GSCOCT00032859001 | |
| 63815 chr11 manual_curation CDS 25935743 25935869 . - 2 Parent=GSCOCT00032859001 | |
| 63816 chr11 manual_curation CDS 25934883 25934981 . - 0 Parent=GSCOCT00032859001 | |
| 63817 chr11 manual_curation CDS 25934738 25934806 . - 0 Parent=GSCOCT00032859001 | |
| 63818 chr11 manual_curation CDS 25934442 25934576 . - 0 Parent=GSCOCT00032859001 | |
| 63819 chr11 manual_curation CDS 25934305 25934373 . - 0 Parent=GSCOCT00032859001 | |
| 63820 chr11 manual_curation CDS 25933522 25933577 . - 0 Parent=GSCOCT00032859001 | |
| 63821 chr11 manual_curation CDS 25933241 25933400 . - 2 Parent=GSCOCT00032859001 | |
| 63822 chr11 manual_curation CDS 25932149 25932313 . - 0 Parent=GSCOCT00032859001 | |
| 63823 chr11 manual_curation CDS 25931457 25931541 . - 0 Parent=GSCOCT00032859001 | |
| 63824 chr11 manual_curation CDS 25931153 25931160 . - 1 Parent=GSCOCT00032859001 | |
| 63825 chr11 manual_curation CDS 25928789 25929056 . - 0 Parent=GSCOCT00032859001 | |
| 63826 chr11 manual_curation CDS 25928587 25928681 . - 1 Parent=GSCOCT00032859001 | |
| 63827 chr11 manual_curation CDS 25928423 25928465 . - 0 Parent=GSCOCT00032859001 | |
| 63828 chr11 manual_curation CDS 25927548 25927705 . - 1 Parent=GSCOCT00032859001 | |
| 63829 chr11 manual_curation CDS 25926421 25926531 . - 0 Parent=GSCOCT00032859001 | |
| 63830 chr11 manual_curation CDS 25925986 25926054 . - 0 Parent=GSCOCT00032859001 | |
| 63831 chr11 manual_curation CDS 25925724 25925867 . - 0 Parent=GSCOCT00032859001 | |
| 63832 chr11 manual_curation CDS 25924617 25924691 . - 0 Parent=GSCOCT00032859001 | |
| 63833 chr11 manual_curation CDS 25924362 25924538 . - 0 Parent=GSCOCT00032859001 | |
| 63834 chr11 manual_curation CDS 25924175 25924260 . - 0 Parent=GSCOCT00032859001 | |
| 63835 chr11 manual_curation CDS 25923401 25923455 . - 2 Parent=GSCOCT00032859001 | |
| 63836 chr11 manual_curation CDS 25921711 25921836 . - 0 Parent=GSCOCT00032859001 | |
| 63837 chr11 manual_curation CDS 25921484 25921588 . - 0 Parent=GSCOCT00032859001 | |
| 63838 chr11 manual_curation CDS 25921262 25921378 . - 0 Parent=GSCOCT00032859001 | |
| 63839 chr11 manual_curation CDS 25921104 25921169 . - 0 Parent=GSCOCT00032859001 | |
| 63840 chr11 manual_curation gene 25945251 25948622 . + . ID=GSCOCG00032857001;Name=Cc11_g08550 | |
| 63841 chr11 manual_curation mRNA 25945251 25948622 . + . ID=GSCOCT00032857001;Parent=GSCOCG00032857001;Name=Cc11_g08550 | |
| 63842 chr11 manual_curation polypeptide 25945305 25948369 . + . ID=GSCOCP00032857001;Dbxref=GENE3D:G3DSA:3.90.79.10,InterPro:IPR000086,InterPro:IPR015797,InterPro:IPR020084,InterPro:IPR020476,PFAM:PF00293,PRINTS:PR00502,PROSITE:PS00893,SUPERFAMILY:SSF55811,SwissProt:Q9C6Z2,SwissProt:Q9CAF2,SwissProt:Q9FNH4,TAIR:AT1G30110.1,TAIR:AT3G10620.1,TAIR:AT5G06340.1,TrEMBL:B9HJB6,TrEMBL:B9HW62,TrEMBL:B9SJ56;Derives_from=GSCOCT00032857001;Name=Cc11_g08550;Ontology_term=CC_evidence_code:ISS,GO:0016787,CC_EC_number:missing_EC_number,PRODUCT:Nudix hydrolase 25,CC_functional_completeness:complete,CC_gene:NUDT25,CC_gene:NUDT26,CC_gene:NUDT27;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032857001~ Nudix hydrolase 25~ NUDT25~ complete;original_location=complement(join(5397296..5397361%2C5395971..5396021%2C5395558..5395650%2C5394989..5395086%2C5394495..5394606%2C5394297..5394401));owner=coffea | |
| 63843 chr11 manual_curation exon 25948265 25948622 . + . Parent=GSCOCT00032857001 | |
| 63844 chr11 manual_curation exon 25948060 25948171 . + . Parent=GSCOCT00032857001 | |
| 63845 chr11 manual_curation exon 25947580 25947677 . + . Parent=GSCOCT00032857001 | |
| 63846 chr11 manual_curation exon 25947016 25947108 . + . Parent=GSCOCT00032857001 | |
| 63847 chr11 manual_curation exon 25946645 25946695 . + . Parent=GSCOCT00032857001 | |
| 63848 chr11 manual_curation exon 25945251 25945370 . + . Parent=GSCOCT00032857001 | |
| 63849 chr11 manual_curation CDS 25948265 25948369 . + 0 Parent=GSCOCT00032857001 | |
| 63850 chr11 manual_curation CDS 25948060 25948171 . + 2 Parent=GSCOCT00032857001 | |
| 63851 chr11 manual_curation CDS 25947580 25947677 . + 0 Parent=GSCOCT00032857001 | |
| 63852 chr11 manual_curation CDS 25947016 25947108 . + 0 Parent=GSCOCT00032857001 | |
| 63853 chr11 manual_curation CDS 25946645 25946695 . + 0 Parent=GSCOCT00032857001 | |
| 63854 chr11 manual_curation CDS 25945305 25945370 . + 0 Parent=GSCOCT00032857001 | |
| 63855 chr11 manual_curation gene 25950596 25953902 . + . ID=GSCOCG00032856001;Name=Cc11_g08560 | |
| 63856 chr11 manual_curation mRNA 25950596 25953902 . + . ID=GSCOCT00032856001;Parent=GSCOCG00032856001;Name=Cc11_g08560 | |
| 63857 chr11 manual_curation polypeptide 25952004 25953902 . + . ID=GSCOCP00032856001;Dbxref=InterPro:IPR001005,InterPro:IPR009057,InterPro:IPR017877,InterPro:IPR017930,PROFILE:PS50090,PROFILE:PS51294,SMART:SM00717,SUPERFAMILY:SSF46689,SwissProt:Q66HG1,SwissProt:Q8CE22,SwissProt:Q9Y222,TAIR:AT5G41020.1,TrEMBL:B9GZM6,TrEMBL:D7MJ00,TrEMBL:I1LYQ8;Derives_from=GSCOCT00032856001;Name=Cc11_g08560;Ontology_term=CC_evidence_code:ISS,GO:0003677,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:DMTF1,CC_gene:Dmtf1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032856001~ Hypothetical protein~ DMTF1~ missing_functional_completeness;original_location=complement(5388764..5390662);owner=coffea | |
| 63858 chr11 manual_curation exon 25950596 25950774 . + . Parent=GSCOCT00032856001 | |
| 63859 chr11 manual_curation exon 25951942 25953902 . + . Parent=GSCOCT00032856001 | |
| 63860 chr11 manual_curation CDS 25952004 25953902 . + 0 Parent=GSCOCT00032856001 | |
| 63861 chr11 manual_curation gene 25955478 25961624 . + . ID=GSCOCG00032854001;Name=Cc11_g08570 | |
| 63862 chr11 manual_curation mRNA 25955478 25961624 . + . ID=GSCOCT00032854001;Parent=GSCOCG00032854001;Name=Cc11_g08570 | |
| 63863 chr11 manual_curation polypeptide 25955478 25960653 . + . ID=GSCOCP00032854001;Dbxref=GENE3D:G3DSA:1.10.10.10,InterPro:IPR005818,InterPro:IPR011991,PFAM:PF00538,SMART:SM00526,TAIR:AT5G08780.1,TrEMBL:B9SJ55,TrEMBL:F2EED1;Derives_from=GSCOCT00032854001;Name=Cc11_g08570;Ontology_term=CC_evidence_code:ISS,GO:0000786,GO:0003677,GO:0005634,GO:0006334,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032854001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(5386898..5387188%2C5382013..5384229));owner=coffea | |
| 63864 chr11 manual_curation exon 25958437 25961624 . + . Parent=GSCOCT00032854001 | |
| 63865 chr11 manual_curation exon 25955478 25955768 . + . Parent=GSCOCT00032854001 | |
| 63866 chr11 manual_curation CDS 25958437 25960653 . + 0 Parent=GSCOCT00032854001 | |
| 63867 chr11 manual_curation CDS 25955478 25955768 . + 0 Parent=GSCOCT00032854001 | |
| 63868 chr11 manual_curation gene 25963149 25966393 . + . ID=GSCOCG00032852001;Name=Cc11_g08580 | |
| 63869 chr11 manual_curation mRNA 25963149 25966393 . + . ID=GSCOCT00032852001;Parent=GSCOCG00032852001;Name=Cc11_g08580 | |
| 63870 chr11 manual_curation polypeptide 25963373 25966393 . + . ID=GSCOCP00032852001;Dbxref=GENE3D:G3DSA:1.10.10.10,InterPro:IPR005818,InterPro:IPR011991,PFAM:PF00538,SMART:SM00526,TAIR:AT3G18035.1,TAIR:AT5G08780.1,TrEMBL:A5BKT1,TrEMBL:B9SJ55,TrEMBL:D7T8T0;Derives_from=GSCOCT00032852001;Name=Cc11_g08580;Ontology_term=CC_evidence_code:ISS,GO:0000786,GO:0003677,GO:0005634,GO:0006334,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032852001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=complement(join(5379147..5379293%2C5378165..5378450%2C5376273..5376451));owner=coffea | |
| 63871 chr11 manual_curation exon 25966215 25966393 . + . Parent=GSCOCT00032852001 | |
| 63872 chr11 manual_curation exon 25964216 25964501 . + . Parent=GSCOCT00032852001 | |
| 63873 chr11 manual_curation exon 25963149 25963519 . + . Parent=GSCOCT00032852001 | |
| 63874 chr11 manual_curation CDS 25966215 25966393 . + 1 Parent=GSCOCT00032852001 | |
| 63875 chr11 manual_curation CDS 25964216 25964501 . + 0 Parent=GSCOCT00032852001 | |
| 63876 chr11 manual_curation CDS 25963373 25963519 . + 0 Parent=GSCOCT00032852001 | |
| 63877 chr11 manual_curation gene 25970429 25976017 . + . ID=GSCOCG00032851001;Name=Cc11_g08590 | |
| 63878 chr11 manual_curation mRNA 25970429 25976017 . + . ID=GSCOCT00032851001;Parent=GSCOCG00032851001;Name=Cc11_g08590 | |
| 63879 chr11 manual_curation polypeptide 25971841 25975731 . + . ID=GSCOCP00032851001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR011009,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q5Z9J0,SwissProt:Q9C9U4,SwissProt:Q9LV37,TAIR:AT1G18150.2,TAIR:AT1G73670.1,TAIR:AT3G18040.1,TrEMBL:B8LQQ5,TrEMBL:D7SJ91,TrEMBL:D7T8T1;Derives_from=GSCOCT00032851001;Name=Cc11_g08590;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.24,PRODUCT:Mitogen-activated protein kinase 12,CC_functional_completeness:fragment,CC_gene:MPK12,CC_gene:MPK9,CC_gene:MPK15;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032851001~ Mitogen-activated protein kinase 12~ MPK12~ fragment;original_location=complement(join(5370663..5370825%2C5370446..5370573%2C5370179..5370238%2C5369583..5369732%2C5369319..5369474%2C5369074..5369211%2C5368918..5368991%2C5367769..5367870%2C5367425..5367683%2C5366935..5367006));owner=coffea | |
| 63880 chr11 manual_curation exon 25970429 25970729 . + . Parent=GSCOCT00032851001 | |
| 63881 chr11 manual_curation exon 25975660 25976017 . + . Parent=GSCOCT00032851001 | |
| 63882 chr11 manual_curation exon 25974983 25975241 . + . Parent=GSCOCT00032851001 | |
| 63883 chr11 manual_curation exon 25974796 25974897 . + . Parent=GSCOCT00032851001 | |
| 63884 chr11 manual_curation exon 25973675 25973748 . + . Parent=GSCOCT00032851001 | |
| 63885 chr11 manual_curation exon 25973455 25973592 . + . Parent=GSCOCT00032851001 | |
| 63886 chr11 manual_curation exon 25973192 25973347 . + . Parent=GSCOCT00032851001 | |
| 63887 chr11 manual_curation exon 25972934 25973083 . + . Parent=GSCOCT00032851001 | |
| 63888 chr11 manual_curation exon 25972428 25972487 . + . Parent=GSCOCT00032851001 | |
| 63889 chr11 manual_curation exon 25972093 25972220 . + . Parent=GSCOCT00032851001 | |
| 63890 chr11 manual_curation exon 25971610 25972003 . + . Parent=GSCOCT00032851001 | |
| 63891 chr11 manual_curation CDS 25975660 25975731 . + 0 Parent=GSCOCT00032851001 | |
| 63892 chr11 manual_curation CDS 25974983 25975241 . + 2 Parent=GSCOCT00032851001 | |
| 63893 chr11 manual_curation CDS 25974796 25974897 . + 2 Parent=GSCOCT00032851001 | |
| 63894 chr11 manual_curation CDS 25973675 25973748 . + 0 Parent=GSCOCT00032851001 | |
| 63895 chr11 manual_curation CDS 25973455 25973592 . + 0 Parent=GSCOCT00032851001 | |
| 63896 chr11 manual_curation CDS 25973192 25973347 . + 0 Parent=GSCOCT00032851001 | |
| 63897 chr11 manual_curation CDS 25972934 25973083 . + 0 Parent=GSCOCT00032851001 | |
| 63898 chr11 manual_curation CDS 25972428 25972487 . + 0 Parent=GSCOCT00032851001 | |
| 63899 chr11 manual_curation CDS 25972093 25972220 . + 1 Parent=GSCOCT00032851001 | |
| 63900 chr11 manual_curation CDS 25971841 25972003 . + 0 Parent=GSCOCT00032851001 | |
| 63901 chr11 manual_curation gene 25976207 25978816 . - . ID=GSCOCG00032850001;Name=Cc11_g08600 | |
| 63902 chr11 manual_curation mRNA 25976207 25978816 . - . ID=GSCOCT00032850001;Parent=GSCOCG00032850001;Name=Cc11_g08600 | |
| 63903 chr11 manual_curation polypeptide 25976765 25978486 . - . ID=GSCOCP00032850001;Dbxref=TAIR:AT1G14990.2,TrEMBL:B9HJB4,TrEMBL:B9SJ53,TrEMBL:D7T8T4;Derives_from=GSCOCT00032850001;Name=Cc11_g08600;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032850001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages.~ unknown_gene~ complete;original_location=join(5364180..5364298%2C5364562..5364643%2C5364743..5364859%2C5365851..5365901);owner=coffea | |
| 63904 chr11 manual_curation exon 25978683 25978816 . - . Parent=GSCOCT00032850001 | |
| 63905 chr11 manual_curation exon 25978368 25978524 . - . Parent=GSCOCT00032850001 | |
| 63906 chr11 manual_curation exon 25978023 25978104 . - . Parent=GSCOCT00032850001 | |
| 63907 chr11 manual_curation exon 25977807 25977923 . - . Parent=GSCOCT00032850001 | |
| 63908 chr11 manual_curation exon 25976207 25976815 . - . Parent=GSCOCT00032850001 | |
| 63909 chr11 manual_curation CDS 25978368 25978486 . - 0 Parent=GSCOCT00032850001 | |
| 63910 chr11 manual_curation CDS 25978023 25978104 . - 2 Parent=GSCOCT00032850001 | |
| 63911 chr11 manual_curation CDS 25977807 25977923 . - 0 Parent=GSCOCT00032850001 | |
| 63912 chr11 manual_curation CDS 25976765 25976815 . - 0 Parent=GSCOCT00032850001 | |
| 63913 chr11 manual_curation gene 25979878 25981224 . + . ID=GSCOCG00032849001;Name=Cc11_g08610 | |
| 63914 chr11 manual_curation mRNA 25979878 25981224 . + . ID=GSCOCT00032849001;Parent=GSCOCG00032849001;Name=Cc11_g08610 | |
| 63915 chr11 manual_curation polypeptide 25979878 25981224 . + . ID=GSCOCP00032849001;Dbxref=InterPro:IPR001563,InterPro:IPR018202,PFAM:PF00450,PRINTS:PR00724,PROSITE:PS00131,PROSITE:PS00560,SwissProt:Q5RFE4,SwissProt:Q9H3G5,SwissProt:Q9M9Q6,TAIR:AT1G15000.1,TAIR:AT3G10410.1,TAIR:AT3G45010.1,TrEMBL:B9HJB2,TrEMBL:B9HJB3,TrEMBL:B9MZ80;Derives_from=GSCOCT00032849001;Name=Cc11_g08610;Ontology_term=CC_evidence_code:ISS,GO:0004185,GO:0006508,CC_EC_number:3.4.16.6,PRODUCT:Serine carboxypeptidase-like 50,CC_functional_completeness:complete,CC_gene:SCPL50,CC_gene:CPVL;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032849001~ Serine carboxypeptidase-like 50~ SCPL50~ complete;original_location=complement(5361442..5362788);owner=coffea | |
| 63916 chr11 manual_curation exon 25979878 25981224 . + . Parent=GSCOCT00032849001 | |
| 63917 chr11 manual_curation CDS 25979878 25981224 . + 0 Parent=GSCOCT00032849001 | |
| 63918 chr11 manual_curation gene 25985311 25985832 . + . ID=GSCOCG00032848001;Name=Cc11_g08620 | |
| 63919 chr11 manual_curation mRNA 25985311 25985832 . + . ID=GSCOCT00032848001;Parent=GSCOCG00032848001;Name=Cc11_g08620 | |
| 63920 chr11 manual_curation polypeptide 25985311 25985832 . + . ID=GSCOCP00032848001;Dbxref=InterPro:IPR008480,PFAM:PF05553,TrEMBL:A5BPX0,TrEMBL:B9RRS2,TrEMBL:F6H3N9;Derives_from=GSCOCT00032848001;Name=Cc11_g08620;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of unknown function DUF761%2C plant,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032848001~ Putative Protein of unknown function DUF761%2C plant~ unknown_gene~ complete;original_location=complement(5356834..5357355);owner=coffea | |
| 63921 chr11 manual_curation exon 25985311 25985832 . + . Parent=GSCOCT00032848001 | |
| 63922 chr11 manual_curation CDS 25985311 25985832 . + 0 Parent=GSCOCT00032848001 | |
| 63923 chr11 manual_curation gene 25988002 25989318 . + . ID=GSCOCG00032847001;Name=Cc11_g08630 | |
| 63924 chr11 manual_curation mRNA 25988002 25989318 . + . ID=GSCOCT00032847001;Parent=GSCOCG00032847001;Name=Cc11_g08630 | |
| 63925 chr11 manual_curation polypeptide 25988002 25989318 . + . ID=GSCOCP00032847001;Dbxref=InterPro:IPR001563,InterPro:IPR018202,PANTHER:PTHR11802,PFAM:PF00450,PRINTS:PR00724,PROSITE:PS00131,PROSITE:PS00560,SwissProt:Q54DY7,SwissProt:Q9H3G5,SwissProt:Q9M9Q6,TAIR:AT1G15000.1,TAIR:AT3G10410.1,TAIR:AT5G22980.1,TrEMBL:B9HJB2,TrEMBL:B9HJB3,TrEMBL:I1ND81;Derives_from=GSCOCT00032847001;Name=Cc11_g08630;Ontology_term=CC_evidence_code:ISS,GO:0004185,GO:0006508,CC_EC_number:3.4.16.5,PRODUCT:Uncharacterized protein,CC_functional_completeness:fragment,CC_gene:SCPL50,CC_gene:DDB_G0291912,CC_gene:CPVL;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032847001~ Uncharacterized protein~ SCPL50~ fragment;original_location=complement(join(5354067..5354664%2C5353921..5354021%2C5353348..5353464));owner=coffea | |
| 63926 chr11 manual_curation exon 25989202 25989318 . + . Parent=GSCOCT00032847001 | |
| 63927 chr11 manual_curation exon 25988645 25988745 . + . Parent=GSCOCT00032847001 | |
| 63928 chr11 manual_curation exon 25988002 25988599 . + . Parent=GSCOCT00032847001 | |
| 63929 chr11 manual_curation CDS 25989202 25989318 . + 0 Parent=GSCOCT00032847001 | |
| 63930 chr11 manual_curation CDS 25988645 25988745 . + 1 Parent=GSCOCT00032847001 | |
| 63931 chr11 manual_curation CDS 25988002 25988599 . + 0 Parent=GSCOCT00032847001 | |
| 63932 chr11 manual_curation gene 25994665 25995981 . + . ID=GSCOCG00032846001;Name=Cc11_g08640 | |
| 63933 chr11 manual_curation mRNA 25994665 25995981 . + . ID=GSCOCT00032846001;Parent=GSCOCG00032846001;Name=Cc11_g08640 | |
| 63934 chr11 manual_curation polypeptide 25994665 25995981 . + . ID=GSCOCP00032846001;Dbxref=InterPro:IPR001563,InterPro:IPR018202,PANTHER:PTHR11802,PFAM:PF00450,PRINTS:PR00724,PROSITE:PS00131,PROSITE:PS00560,SwissProt:Q54DY7,SwissProt:Q9H3G5,SwissProt:Q9M9Q6,TAIR:AT1G15000.1,TAIR:AT3G10410.1,TAIR:AT5G22980.1,TrEMBL:B9HJB2,TrEMBL:B9HJB3,TrEMBL:I1ND81;Derives_from=GSCOCT00032846001;Name=Cc11_g08640;Ontology_term=CC_evidence_code:ISS,GO:0004185,GO:0006508,CC_EC_number:3.4.16.5,PRODUCT:Uncharacterized protein,CC_functional_completeness:fragment,CC_gene:SCPL50,CC_gene:DDB_G0291912,CC_gene:CPVL;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032846001~ Uncharacterized protein~ SCPL50~ fragment;original_location=complement(join(5347258..5348001%2C5346685..5346801));owner=coffea | |
| 63935 chr11 manual_curation exon 25995865 25995981 . + . Parent=GSCOCT00032846001 | |
| 63936 chr11 manual_curation exon 25994665 25995408 . + . Parent=GSCOCT00032846001 | |
| 63937 chr11 manual_curation CDS 25995865 25995981 . + 0 Parent=GSCOCT00032846001 | |
| 63938 chr11 manual_curation CDS 25994665 25995408 . + 0 Parent=GSCOCT00032846001 | |
| 63939 chr11 manual_curation gene 26005832 26007148 . + . ID=GSCOCG00032845001;Name=Cc11_g08650 | |
| 63940 chr11 manual_curation mRNA 26005832 26007148 . + . ID=GSCOCT00032845001;Parent=GSCOCG00032845001;Name=Cc11_g08650 | |
| 63941 chr11 manual_curation polypeptide 26005832 26007148 . + . ID=GSCOCP00032845001;Dbxref=InterPro:IPR001563,InterPro:IPR018202,PANTHER:PTHR11802,PFAM:PF00450,PRINTS:PR00724,PROSITE:PS00131,PROSITE:PS00560,SwissProt:Q5RFE4,SwissProt:Q9H3G5,SwissProt:Q9M9Q6,TAIR:AT1G15000.1,TAIR:AT3G10410.1,TAIR:AT5G22980.1,TrEMBL:B9HJB2,TrEMBL:B9HJB3,TrEMBL:G7KEM3;Derives_from=GSCOCT00032845001;Name=Cc11_g08650;Ontology_term=CC_evidence_code:ISS,GO:0004185,GO:0006508,CC_EC_number:3.4.16.5,PRODUCT:Serine carboxypeptidase-like protein,CC_functional_completeness:fragment,CC_gene:SCPL50,CC_gene:CPVL;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032845001~ Serine carboxypeptidase-like protein~ SCPL50~ fragment;original_location=complement(join(5336091..5336834%2C5335518..5335634));owner=coffea | |
| 63942 chr11 manual_curation exon 26007032 26007148 . + . Parent=GSCOCT00032845001 | |
| 63943 chr11 manual_curation exon 26005832 26006575 . + . Parent=GSCOCT00032845001 | |
| 63944 chr11 manual_curation CDS 26007032 26007148 . + 0 Parent=GSCOCT00032845001 | |
| 63945 chr11 manual_curation CDS 26005832 26006575 . + 0 Parent=GSCOCT00032845001 | |
| 63946 chr11 manual_curation gene 26009785 26027220 . + . ID=GSCOCG00032843001;Name=Cc11_g08660 | |
| 63947 chr11 manual_curation mRNA 26009785 26027220 . + . ID=GSCOCT00032843001;Parent=GSCOCG00032843001;Name=Cc11_g08660 | |
| 63948 chr11 manual_curation polypeptide 26011342 26027220 . + . ID=GSCOCP00032843001;Dbxref=InterPro:IPR001650,InterPro:IPR004609,InterPro:IPR011545,InterPro:IPR014001,InterPro:IPR014021,InterPro:IPR016027,PFAM:PF00270,PFAM:PF00271,PROFILE:PS51192,PROFILE:PS51194,SMART:SM00487,SMART:SM00490,SUPERFAMILY:SSF50249,SwissProt:Q54900,SwissProt:Q55681,SwissProt:Q8CSV3,TAIR:AT2G01440.1,TAIR:AT3G02060.1,TIGRFAMs:TIGR00643,TrEMBL:B9HW67,TrEMBL:B9SJ51,TrEMBL:F6HFI2;Derives_from=GSCOCT00032843001;Name=Cc11_g08660;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0004003,GO:0004386,GO:0005524,GO:0006281,GO:0006310,GO:0008026,CC_EC_number:missing_EC_number,PRODUCT:Putative ATP-dependent DNA helicase recG,CC_functional_completeness:modules,CC_gene:recG;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032843001~ Putative ATP-dependent DNA helicase recG~ recG~ modules;original_location=complement(join(5331286..5331324%2C5329440..5329522%2C5329222..5329357%2C5328171..5328704%2C5327959..5328071%2C5326271..5326505%2C5325012..5325175%2C5322929..5323010%2C5322172..5322261%2C5320917..5321150%2C5320225..5320296%2C5319638..5319785%2C5319407..5319534%2C5318821..5318979%2C5317687..5317770%2C5316296..5316868%2C5315446..5315538));owner=coffea | |
| 63949 chr11 manual_curation exon 26009785 26009984 . + . Parent=GSCOCT00032843001 | |
| 63950 chr11 manual_curation exon 26027128 26027220 . + . Parent=GSCOCT00032843001 | |
| 63951 chr11 manual_curation exon 26025798 26026370 . + . Parent=GSCOCT00032843001 | |
| 63952 chr11 manual_curation exon 26024896 26024979 . + . Parent=GSCOCT00032843001 | |
| 63953 chr11 manual_curation exon 26023687 26023845 . + . Parent=GSCOCT00032843001 | |
| 63954 chr11 manual_curation exon 26023132 26023259 . + . Parent=GSCOCT00032843001 | |
| 63955 chr11 manual_curation exon 26022881 26023028 . + . Parent=GSCOCT00032843001 | |
| 63956 chr11 manual_curation exon 26022370 26022441 . + . Parent=GSCOCT00032843001 | |
| 63957 chr11 manual_curation exon 26021516 26021749 . + . Parent=GSCOCT00032843001 | |
| 63958 chr11 manual_curation exon 26020405 26020494 . + . Parent=GSCOCT00032843001 | |
| 63959 chr11 manual_curation exon 26019656 26019737 . + . Parent=GSCOCT00032843001 | |
| 63960 chr11 manual_curation exon 26017491 26017654 . + . Parent=GSCOCT00032843001 | |
| 63961 chr11 manual_curation exon 26016161 26016395 . + . Parent=GSCOCT00032843001 | |
| 63962 chr11 manual_curation exon 26014595 26014707 . + . Parent=GSCOCT00032843001 | |
| 63963 chr11 manual_curation exon 26013962 26014495 . + . Parent=GSCOCT00032843001 | |
| 63964 chr11 manual_curation exon 26013309 26013444 . + . Parent=GSCOCT00032843001 | |
| 63965 chr11 manual_curation exon 26013144 26013226 . + . Parent=GSCOCT00032843001 | |
| 63966 chr11 manual_curation exon 26011329 26011380 . + . Parent=GSCOCT00032843001 | |
| 63967 chr11 manual_curation CDS 26027128 26027220 . + 0 Parent=GSCOCT00032843001 | |
| 63968 chr11 manual_curation CDS 26025798 26026370 . + 0 Parent=GSCOCT00032843001 | |
| 63969 chr11 manual_curation CDS 26024896 26024979 . + 0 Parent=GSCOCT00032843001 | |
| 63970 chr11 manual_curation CDS 26023687 26023845 . + 0 Parent=GSCOCT00032843001 | |
| 63971 chr11 manual_curation CDS 26023132 26023259 . + 1 Parent=GSCOCT00032843001 | |
| 63972 chr11 manual_curation CDS 26022881 26023028 . + 0 Parent=GSCOCT00032843001 | |
| 63973 chr11 manual_curation CDS 26022370 26022441 . + 0 Parent=GSCOCT00032843001 | |
| 63974 chr11 manual_curation CDS 26021516 26021749 . + 0 Parent=GSCOCT00032843001 | |
| 63975 chr11 manual_curation CDS 26020405 26020494 . + 0 Parent=GSCOCT00032843001 | |
| 63976 chr11 manual_curation CDS 26019656 26019737 . + 2 Parent=GSCOCT00032843001 | |
| 63977 chr11 manual_curation CDS 26017491 26017654 . + 0 Parent=GSCOCT00032843001 | |
| 63978 chr11 manual_curation CDS 26016161 26016395 . + 2 Parent=GSCOCT00032843001 | |
| 63979 chr11 manual_curation CDS 26014595 26014707 . + 0 Parent=GSCOCT00032843001 | |
| 63980 chr11 manual_curation CDS 26013962 26014495 . + 0 Parent=GSCOCT00032843001 | |
| 63981 chr11 manual_curation CDS 26013309 26013444 . + 2 Parent=GSCOCT00032843001 | |
| 63982 chr11 manual_curation CDS 26013144 26013226 . + 0 Parent=GSCOCT00032843001 | |
| 63983 chr11 manual_curation CDS 26011342 26011380 . + 0 Parent=GSCOCT00032843001 | |
| 63984 chr11 manual_curation gene 26035919 26038801 . + . ID=GSCOCG00032841001;Name=Cc11_g08670 | |
| 63985 chr11 manual_curation mRNA 26035919 26038801 . + . ID=GSCOCT00032841001;Parent=GSCOCG00032841001;Name=Cc11_g08670 | |
| 63986 chr11 manual_curation polypeptide 26035919 26038801 . + . ID=GSCOCP00032841001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001356,InterPro:IPR003106,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR017970,PFAM:PF00046,PFAM:PF02183,PROFILE:PS50071,PROSITE:PS00027,SMART:SM00340,SMART:SM00389,SUPERFAMILY:SSF46689,SwissProt:Q0JKX1,SwissProt:Q8S9N6,SwissProt:Q9XH38,TAIR:AT1G70920.1,TAIR:AT2G01430.1,TAIR:AT5G06710.1,TrEMBL:B9SJ50,TrEMBL:D7T8T6,TrEMBL:I1KM50;Derives_from=GSCOCT00032841001;Name=Cc11_g08670;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,GO:0005634,GO:0030528,GO:0043565,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Homeobox-leucine zipper protein HOX3,CC_functional_completeness:modules,CC_gene:HOX3,CC_gene:ATHB-17;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032841001~ Homeobox-leucine zipper protein HOX3~ HOX3~ modules;original_location=complement(join(5306660..5306747%2C5306035..5306222%2C5305800..5305879%2C5303865..5304204));owner=coffea | |
| 63987 chr11 manual_curation exon 26038462 26038801 . + . Parent=GSCOCT00032841001 | |
| 63988 chr11 manual_curation exon 26036787 26036866 . + . Parent=GSCOCT00032841001 | |
| 63989 chr11 manual_curation exon 26036444 26036631 . + . Parent=GSCOCT00032841001 | |
| 63990 chr11 manual_curation exon 26035919 26036006 . + . Parent=GSCOCT00032841001 | |
| 63991 chr11 manual_curation CDS 26038462 26038801 . + 2 Parent=GSCOCT00032841001 | |
| 63992 chr11 manual_curation CDS 26036787 26036866 . + 0 Parent=GSCOCT00032841001 | |
| 63993 chr11 manual_curation CDS 26036444 26036631 . + 1 Parent=GSCOCT00032841001 | |
| 63994 chr11 manual_curation CDS 26035919 26036006 . + 0 Parent=GSCOCT00032841001 | |
| 63995 chr11 manual_curation gene 26054971 26059237 . + . ID=GSCOCG00032840001;Name=Cc11_g08680 | |
| 63996 chr11 manual_curation mRNA 26054971 26059237 . + . ID=GSCOCT00032840001;Parent=GSCOCG00032840001;Name=Cc11_g08680 | |
| 63997 chr11 manual_curation polypeptide 26055397 26058350 . + . ID=GSCOCP00032840001;Dbxref=InterPro:IPR004776,InterPro:IPR014024,PFAM:PF03547,SwissProt:Q8RWZ6,SwissProt:Q940Y5,SwissProt:Q9S7Z8,TAIR:AT1G23080.1,TAIR:AT1G70940.1,TAIR:AT2G01420.2,TIGRFAMs:TIGR00946,TrEMBL:B9HJA9,TrEMBL:D6RT10,TrEMBL:E5KGD4;Derives_from=GSCOCT00032840001;Name=Cc11_g08680;Ontology_term=CC_evidence_code:ISS,GO:0016021,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Auxin efflux carrier component 3,CC_functional_completeness:complete,CC_gene:PIN3,CC_gene:PIN7,CC_gene:PIN4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032840001~ Auxin efflux carrier component 3~ PIN3~ complete;original_location=complement(join(5285958..5287269%2C5285571..5285868%2C5285386..5285471%2C5284688..5284845%2C5284482..5284558%2C5284316..5284382));owner=coffea | |
| 63998 chr11 manual_curation exon 26058284 26059237 . + . Parent=GSCOCT00032840001 | |
| 63999 chr11 manual_curation exon 26058108 26058184 . + . Parent=GSCOCT00032840001 | |
| 64000 chr11 manual_curation exon 26057821 26057978 . + . Parent=GSCOCT00032840001 | |
| 64001 chr11 manual_curation exon 26057195 26057280 . + . Parent=GSCOCT00032840001 | |
| 64002 chr11 manual_curation exon 26056798 26057095 . + . Parent=GSCOCT00032840001 | |
| 64003 chr11 manual_curation exon 26054971 26056708 . + . Parent=GSCOCT00032840001 | |
| 64004 chr11 manual_curation CDS 26058284 26058350 . + 2 Parent=GSCOCT00032840001 | |
| 64005 chr11 manual_curation CDS 26058108 26058184 . + 0 Parent=GSCOCT00032840001 | |
| 64006 chr11 manual_curation CDS 26057821 26057978 . + 1 Parent=GSCOCT00032840001 | |
| 64007 chr11 manual_curation CDS 26057195 26057280 . + 2 Parent=GSCOCT00032840001 | |
| 64008 chr11 manual_curation CDS 26056798 26057095 . + 1 Parent=GSCOCT00032840001 | |
| 64009 chr11 manual_curation CDS 26055397 26056708 . + 0 Parent=GSCOCT00032840001 | |
| 64010 chr11 manual_curation gene 26075747 26077737 . + . ID=GSCOCG00032839001;Name=Cc11_g08690 | |
| 64011 chr11 manual_curation mRNA 26075747 26077737 . + . ID=GSCOCT00032839001;Parent=GSCOCG00032839001;Name=Cc11_g08690 | |
| 64012 chr11 manual_curation polypeptide 26075747 26077737 . + . ID=GSCOCP00032839001;Dbxref=GENE3D:G3DSA:1.20.1080.10,InterPro:IPR000425,PANTHER:PTHR19139,PFAM:PF00230,PRINTS:PR00783,SUPERFAMILY:SSF81338,SwissProt:Q0DK16,SwissProt:Q8W036,SwissProt:Q9FIZ9,TAIR:AT4G18910.1,TAIR:AT5G37810.1,TAIR:AT5G37820.1,TrEMBL:C5XYL0,TrEMBL:D7MII4,TrEMBL:F6HSL2;Derives_from=GSCOCT00032839001;Name=Cc11_g08690;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006810,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein Sb04g008360,CC_functional_completeness:fragment,CC_gene:NIP4-1,CC_gene:NIP4-2,CC_gene:NIP1-3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032839001~ Putative uncharacterized protein Sb04g008360~ NIP4-1~ fragment;original_location=complement(join(5266837..5266919%2C5265342..5265506%2C5264929..5265145));owner=coffea | |
| 64013 chr11 manual_curation exon 26077521 26077737 . + . Parent=GSCOCT00032839001 | |
| 64014 chr11 manual_curation exon 26077160 26077324 . + . Parent=GSCOCT00032839001 | |
| 64015 chr11 manual_curation exon 26075747 26075829 . + . Parent=GSCOCT00032839001 | |
| 64016 chr11 manual_curation CDS 26077521 26077737 . + 2 Parent=GSCOCT00032839001 | |
| 64017 chr11 manual_curation CDS 26077160 26077324 . + 2 Parent=GSCOCT00032839001 | |
| 64018 chr11 manual_curation CDS 26075747 26075829 . + 0 Parent=GSCOCT00032839001 | |
| 64019 chr11 manual_curation gene 26084063 26087280 . + . ID=GSCOCG00032838001;Name=Cc11_g08700 | |
| 64020 chr11 manual_curation mRNA 26084063 26087280 . + . ID=GSCOCT00032838001;Parent=GSCOCG00032838001;Name=Cc11_g08700 | |
| 64021 chr11 manual_curation polypeptide 26084429 26087280 . + . ID=GSCOCP00032838001;Dbxref=TAIR:AT1G23060.1,TAIR:AT1G24160.1,TAIR:AT1G70950.1,TrEMBL:B9SJ47,TrEMBL:D7T8T9,TrEMBL:I1KM44;Derives_from=GSCOCT00032838001;Name=Cc11_g08700;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032838001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=complement(join(5258169..5258237%2C5256472..5257287%2C5256040..5256267%2C5255863..5255903%2C5255599..5255781%2C5255386..5255512));owner=coffea | |
| 64022 chr11 manual_curation exon 26084063 26084287 . + . Parent=GSCOCT00032838001 | |
| 64023 chr11 manual_curation exon 26087154 26087280 . + . Parent=GSCOCT00032838001 | |
| 64024 chr11 manual_curation exon 26086885 26087067 . + . Parent=GSCOCT00032838001 | |
| 64025 chr11 manual_curation exon 26086763 26086803 . + . Parent=GSCOCT00032838001 | |
| 64026 chr11 manual_curation exon 26086399 26086626 . + . Parent=GSCOCT00032838001 | |
| 64027 chr11 manual_curation exon 26085379 26086194 . + . Parent=GSCOCT00032838001 | |
| 64028 chr11 manual_curation exon 26084417 26084497 . + . Parent=GSCOCT00032838001 | |
| 64029 chr11 manual_curation CDS 26087154 26087280 . + 2 Parent=GSCOCT00032838001 | |
| 64030 chr11 manual_curation CDS 26086885 26087067 . + 2 Parent=GSCOCT00032838001 | |
| 64031 chr11 manual_curation CDS 26086763 26086803 . + 0 Parent=GSCOCT00032838001 | |
| 64032 chr11 manual_curation CDS 26086399 26086626 . + 0 Parent=GSCOCT00032838001 | |
| 64033 chr11 manual_curation CDS 26085379 26086194 . + 0 Parent=GSCOCT00032838001 | |
| 64034 chr11 manual_curation CDS 26084429 26084497 . + 0 Parent=GSCOCT00032838001 | |
| 64035 chr11 manual_curation gene 26087375 26088918 . + . ID=GSCOCG00032837001;Name=Cc11_g08710 | |
| 64036 chr11 manual_curation mRNA 26087375 26088918 . + . ID=GSCOCT00032837001;Parent=GSCOCG00032837001;Name=Cc11_g08710 | |
| 64037 chr11 manual_curation polypeptide 26087375 26088918 . + . ID=GSCOCP00032837001;Dbxref=InterPro:IPR009675,PFAM:PF06886,TAIR:AT1G70950.1,TAIR:AT2G35880.1,TrEMBL:B9SJ47,TrEMBL:D7T8T9,TrEMBL:I1ND73;Derives_from=GSCOCT00032837001;Name=Cc11_g08710;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032837001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=complement(join(5255244..5255291%2C5254825..5254932%2C5253748..5254224));owner=coffea | |
| 64038 chr11 manual_curation exon 26088442 26088918 . + . Parent=GSCOCT00032837001 | |
| 64039 chr11 manual_curation exon 26087734 26087841 . + . Parent=GSCOCT00032837001 | |
| 64040 chr11 manual_curation exon 26087375 26087422 . + . Parent=GSCOCT00032837001 | |
| 64041 chr11 manual_curation CDS 26088442 26088918 . + 0 Parent=GSCOCT00032837001 | |
| 64042 chr11 manual_curation CDS 26087734 26087841 . + 0 Parent=GSCOCT00032837001 | |
| 64043 chr11 manual_curation CDS 26087375 26087422 . + 0 Parent=GSCOCT00032837001 | |
| 64044 chr11 manual_curation gene 26090208 26091457 . - . ID=GSCOCG00032835001;Name=Cc11_g08720 | |
| 64045 chr11 manual_curation mRNA 26090208 26091457 . - . ID=GSCOCT00032835001;Parent=GSCOCG00032835001;Name=Cc11_g08720 | |
| 64046 chr11 manual_curation polypeptide 26090896 26091312 . - . ID=GSCOCP00032835001;Derives_from=GSCOCT00032835001;Name=Cc11_g08720;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032835001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=5251354..5251770;owner=coffea | |
| 64047 chr11 manual_curation exon 26090208 26091457 . - . Parent=GSCOCT00032835001 | |
| 64048 chr11 manual_curation CDS 26090896 26091312 . - 0 Parent=GSCOCT00032835001 | |
| 64049 chr11 manual_curation gene 26103531 26104499 . - . ID=GSCOCG00032833001;Name=Cc11_g08730 | |
| 64050 chr11 manual_curation mRNA 26103531 26104499 . - . ID=GSCOCT00032833001;Parent=GSCOCG00032833001;Name=Cc11_g08730 | |
| 64051 chr11 manual_curation polypeptide 26103836 26104246 . - . ID=GSCOCP00032833001;Derives_from=GSCOCT00032833001;Name=Cc11_g08730;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032833001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=5238420..5238830;owner=coffea | |
| 64052 chr11 manual_curation exon 26103531 26104499 . - . Parent=GSCOCT00032833001 | |
| 64053 chr11 manual_curation CDS 26103836 26104246 . - 0 Parent=GSCOCT00032833001 | |
| 64054 chr11 manual_curation gene 26126435 26129542 . + . ID=GSCOCG00032831001;Name=Cc11_g08740 | |
| 64055 chr11 manual_curation mRNA 26126435 26129542 . + . ID=GSCOCT00032831001;Parent=GSCOCG00032831001;Name=Cc11_g08740 | |
| 64056 chr11 manual_curation polypeptide 26126568 26128997 . + . ID=GSCOCP00032831001;Dbxref=GENE3D:G3DSA:1.10.287.110,InterPro:IPR001623,InterPro:IPR015609,InterPro:IPR018253,PANTHER:PTHR11821,PFAM:PF00226,PROFILE:PS50076,PROSITE:PS00636,SMART:SM00271,SUPERFAMILY:SSF46565,SwissProt:A5IIT4,SwissProt:B1LCI2,SwissProt:B9KAB9,TAIR:AT1G56300.1,TAIR:AT1G71000.1,TAIR:AT3G14200.1,TrEMBL:C6SXV6,TrEMBL:F6HFI6,TrEMBL:I1ND69;Derives_from=GSCOCT00032831001;Name=Cc11_g08740;Ontology_term=CC_evidence_code:ISS,GO:0031072,CC_EC_number:missing_EC_number,PRODUCT:Putative Chaperone protein DnaJ,CC_functional_completeness:fragment,CC_gene:dnaJ;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032831001~ Putative Chaperone protein DnaJ~ dnaJ~ fragment;original_location=complement(join(5215991..5216098%2C5215733..5215820%2C5215527..5215606%2C5215369..5215425%2C5213669..5213959));owner=coffea | |
| 64057 chr11 manual_curation exon 26128707 26129542 . + . Parent=GSCOCT00032831001 | |
| 64058 chr11 manual_curation exon 26127241 26127297 . + . Parent=GSCOCT00032831001 | |
| 64059 chr11 manual_curation exon 26127060 26127139 . + . Parent=GSCOCT00032831001 | |
| 64060 chr11 manual_curation exon 26126846 26126933 . + . Parent=GSCOCT00032831001 | |
| 64061 chr11 manual_curation exon 26126435 26126675 . + . Parent=GSCOCT00032831001 | |
| 64062 chr11 manual_curation CDS 26128707 26128997 . + 0 Parent=GSCOCT00032831001 | |
| 64063 chr11 manual_curation CDS 26127241 26127297 . + 0 Parent=GSCOCT00032831001 | |
| 64064 chr11 manual_curation CDS 26127060 26127139 . + 1 Parent=GSCOCT00032831001 | |
| 64065 chr11 manual_curation CDS 26126846 26126933 . + 0 Parent=GSCOCT00032831001 | |
| 64066 chr11 manual_curation CDS 26126568 26126675 . + 0 Parent=GSCOCT00032831001 | |
| 64067 chr11 manual_curation gene 26171147 26174989 . + . ID=GSCOCG00032830001;Name=Cc11_g08750 | |
| 64068 chr11 manual_curation mRNA 26171147 26174989 . + . ID=GSCOCT00032830001;Parent=GSCOCG00032830001;Name=Cc11_g08750 | |
| 64069 chr11 manual_curation polypeptide 26171147 26174989 . + . ID=GSCOCP00032830001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,InterPro:IPR021929,PFAM:PF00931,PFAM:PF12061,PRINTS:PR00364,SwissProt:Q6L3Z4,SwissProt:Q6L400,SwissProt:Q8W1E0,TAIR:AT1G50180.1,TAIR:AT3G46730.1,TAIR:AT5G43470.1,TrEMBL:Q6L432,TrEMBL:Q9LLD0,TrEMBL:Q9LLD4;Derives_from=GSCOCT00032830001;Name=Cc11_g08750;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1B-12,CC_functional_completeness:complete,CC_gene:R1B-12,CC_gene:R1A,CC_gene:R1B-16;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032830001~ Putative late blight resistance protein homolog R1B-12~ R1B-12~ complete;original_location=complement(5167677..5171519);owner=coffea | |
| 64070 chr11 manual_curation exon 26171147 26174989 . + . Parent=GSCOCT00032830001 | |
| 64071 chr11 manual_curation CDS 26171147 26174989 . + 0 Parent=GSCOCT00032830001 | |
| 64072 chr11 manual_curation gene 26177530 26182531 . - . ID=GSCOCG00032829001;Name=Cc11_g08760 | |
| 64073 chr11 manual_curation mRNA 26177530 26182531 . - . ID=GSCOCT00032829001;Parent=GSCOCG00032829001;Name=Cc11_g08760 | |
| 64074 chr11 manual_curation polypeptide 26178500 26182531 . - . ID=GSCOCP00032829001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q6L3Z4,SwissProt:Q6L3Z7,SwissProt:Q6L400,TAIR:AT1G50180.1,TAIR:AT3G46530.1,TAIR:AT3G46730.1,TrEMBL:Q6L432,TrEMBL:Q96485,TrEMBL:Q9LLD0;Derives_from=GSCOCT00032829001;Name=Cc11_g08760;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1B-12,CC_functional_completeness:complete,CC_gene:R1B-12,CC_gene:R1B-16,CC_gene:R1B-14;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032829001~ Putative late blight resistance protein homolog R1B-12~ R1B-12~ complete;original_location=join(5160135..5160188%2C5160360..5163585%2C5163700..5164166);owner=coffea | |
| 64075 chr11 manual_curation exon 26178114 26178222 . - . Parent=GSCOCT00032829001 | |
| 64076 chr11 manual_curation exon 26177530 26178005 . - . Parent=GSCOCT00032829001 | |
| 64077 chr11 manual_curation exon 26182478 26182531 . - . Parent=GSCOCT00032829001 | |
| 64078 chr11 manual_curation exon 26179081 26182306 . - . Parent=GSCOCT00032829001 | |
| 64079 chr11 manual_curation exon 26178497 26178966 . - . Parent=GSCOCT00032829001 | |
| 64080 chr11 manual_curation CDS 26182478 26182531 . - 0 Parent=GSCOCT00032829001 | |
| 64081 chr11 manual_curation CDS 26179081 26182306 . - 0 Parent=GSCOCT00032829001 | |
| 64082 chr11 manual_curation CDS 26178500 26178966 . - 1 Parent=GSCOCT00032829001 | |
| 64083 chr11 manual_curation gene 26183926 26187917 . + . ID=GSCOCG00032828001;Name=Cc11_g08770 | |
| 64084 chr11 manual_curation mRNA 26183926 26187917 . + . ID=GSCOCT00032828001;Parent=GSCOCG00032828001;Name=Cc11_g08770 | |
| 64085 chr11 manual_curation polypeptide 26184120 26187891 . + . ID=GSCOCP00032828001;Dbxref=GENE3D:G3DSA:3.20.20.70,InterPro:IPR002638,InterPro:IPR004393,InterPro:IPR013785,InterPro:IPR022412,PFAM:PF01729,PFAM:PF02749,SUPERFAMILY:SSF51690,SwissProt:P30819,SwissProt:P39666,SwissProt:P77938,TAIR:AT2G01350.1,TIGRFAMs:TIGR00078,TrEMBL:B2RFT0,TrEMBL:Q0WX54,TrEMBL:Q0WX55;Derives_from=GSCOCT00032828001;Name=Cc11_g08770;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004514,GO:0008152,GO:0009435,GO:0019363,CC_EC_number:2.4.2.19,PRODUCT:Putative Probable nicotinate-nucleotide pyrophosphorylase [carboxylating],CC_functional_completeness:complete,CC_gene:nadC;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032828001~ Putative Probable nicotinate-nucleotide pyrophosphorylase [carboxylating]~ nadC~ complete;original_location=complement(join(5158488..5158546%2C5158171..5158313%2C5157203..5157336%2C5156891..5156954%2C5156714..5156796%2C5156139..5156222%2C5155900..5156052%2C5155634..5155810%2C5155135..5155202%2C5154775..5154871));owner=coffea | |
| 64086 chr11 manual_curation exon 26187795 26187917 . + . Parent=GSCOCT00032828001 | |
| 64087 chr11 manual_curation exon 26187464 26187531 . + . Parent=GSCOCT00032828001 | |
| 64088 chr11 manual_curation exon 26186856 26187032 . + . Parent=GSCOCT00032828001 | |
| 64089 chr11 manual_curation exon 26186614 26186766 . + . Parent=GSCOCT00032828001 | |
| 64090 chr11 manual_curation exon 26186444 26186527 . + . Parent=GSCOCT00032828001 | |
| 64091 chr11 manual_curation exon 26185870 26185952 . + . Parent=GSCOCT00032828001 | |
| 64092 chr11 manual_curation exon 26185712 26185775 . + . Parent=GSCOCT00032828001 | |
| 64093 chr11 manual_curation exon 26185330 26185463 . + . Parent=GSCOCT00032828001 | |
| 64094 chr11 manual_curation exon 26184353 26184495 . + . Parent=GSCOCT00032828001 | |
| 64095 chr11 manual_curation exon 26183926 26184178 . + . Parent=GSCOCT00032828001 | |
| 64096 chr11 manual_curation CDS 26187795 26187891 . + 2 Parent=GSCOCT00032828001 | |
| 64097 chr11 manual_curation CDS 26187464 26187531 . + 0 Parent=GSCOCT00032828001 | |
| 64098 chr11 manual_curation CDS 26186856 26187032 . + 0 Parent=GSCOCT00032828001 | |
| 64099 chr11 manual_curation CDS 26186614 26186766 . + 0 Parent=GSCOCT00032828001 | |
| 64100 chr11 manual_curation CDS 26186444 26186527 . + 0 Parent=GSCOCT00032828001 | |
| 64101 chr11 manual_curation CDS 26185870 26185952 . + 1 Parent=GSCOCT00032828001 | |
| 64102 chr11 manual_curation CDS 26185712 26185775 . + 0 Parent=GSCOCT00032828001 | |
| 64103 chr11 manual_curation CDS 26185330 26185463 . + 1 Parent=GSCOCT00032828001 | |
| 64104 chr11 manual_curation CDS 26184353 26184495 . + 2 Parent=GSCOCT00032828001 | |
| 64105 chr11 manual_curation CDS 26184120 26184178 . + 0 Parent=GSCOCT00032828001 | |
| 64106 chr11 manual_curation gene 26199974 26200804 . - . ID=GSCOCG00032826001;Name=Cc11_g08780 | |
| 64107 chr11 manual_curation mRNA 26199974 26200804 . - . ID=GSCOCT00032826001;Parent=GSCOCG00032826001;Name=Cc11_g08780 | |
| 64108 chr11 manual_curation polypeptide 26199974 26200201 . - . ID=GSCOCP00032826001;Derives_from=GSCOCT00032826001;Name=Cc11_g08780;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032826001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=5142465..5142692;owner=coffea | |
| 64109 chr11 manual_curation exon 26199974 26200804 . - . Parent=GSCOCT00032826001 | |
| 64110 chr11 manual_curation CDS 26199974 26200201 . - 0 Parent=GSCOCT00032826001 | |
| 64111 chr11 manual_curation gene 26201025 26208778 . + . ID=GSCOCG00032825001;Name=Cc11_g08790 | |
| 64112 chr11 manual_curation mRNA 26201025 26208778 . + . ID=GSCOCT00032825001;Parent=GSCOCG00032825001;Name=Cc11_g08790 | |
| 64113 chr11 manual_curation polypeptide 26201025 26208515 . + . ID=GSCOCP00032825001;Dbxref=InterPro:IPR002423,InterPro:IPR002498,InterPro:IPR011011,InterPro:IPR016034,InterPro:IPR017455,PANTHER:PTHR11353,PFAM:PF00118,PFAM:PF01504,PROFILE:PS50178,PROFILE:PS51455,SMART:SM00330,SUPERFAMILY:SSF57903,SwissProt:P34756,SwissProt:Q9Y2I7,SwissProt:Q9Z1T6,TAIR:AT1G71010.1,TAIR:AT3G14270.1,TAIR:AT4G33240.1,TrEMBL:B9HJA2,TrEMBL:B9HW75,TrEMBL:F6HFI9;Derives_from=GSCOCT00032825001;Name=Cc11_g08790;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0005524,GO:0008270,GO:0016307,GO:0044267,GO:0046488,CC_EC_number:2.7.1.150,PRODUCT:FORMS APLOID AND BINUCLEATE CELLS 1C,CC_functional_completeness:complete,CC_gene:FAB1,CC_gene:PIKFYVE,CC_gene:Pikfyve;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032825001~ FORMS APLOID AND BINUCLEATE CELLS 1C~ FAB1~ complete;original_location=complement(join(5141130..5141641%2C5139952..5140722%2C5139666..5139819%2C5139245..5139589%2C5137846..5138568%2C5137421..5137752%2C5137157..5137280%2C5136856..5137020%2C5135243..5136733%2C5134780..5135046%2C5134151..5134405));owner=coffea | |
| 64114 chr11 manual_curation exon 26208261 26208778 . + . Parent=GSCOCT00032825001 | |
| 64115 chr11 manual_curation exon 26207620 26207886 . + . Parent=GSCOCT00032825001 | |
| 64116 chr11 manual_curation exon 26205933 26207423 . + . Parent=GSCOCT00032825001 | |
| 64117 chr11 manual_curation exon 26205646 26205810 . + . Parent=GSCOCT00032825001 | |
| 64118 chr11 manual_curation exon 26205386 26205509 . + . Parent=GSCOCT00032825001 | |
| 64119 chr11 manual_curation exon 26204914 26205245 . + . Parent=GSCOCT00032825001 | |
| 64120 chr11 manual_curation exon 26204098 26204820 . + . Parent=GSCOCT00032825001 | |
| 64121 chr11 manual_curation exon 26203077 26203421 . + . Parent=GSCOCT00032825001 | |
| 64122 chr11 manual_curation exon 26202847 26203000 . + . Parent=GSCOCT00032825001 | |
| 64123 chr11 manual_curation exon 26201944 26202714 . + . Parent=GSCOCT00032825001 | |
| 64124 chr11 manual_curation exon 26201025 26201536 . + . Parent=GSCOCT00032825001 | |
| 64125 chr11 manual_curation CDS 26208261 26208515 . + 0 Parent=GSCOCT00032825001 | |
| 64126 chr11 manual_curation CDS 26207620 26207886 . + 0 Parent=GSCOCT00032825001 | |
| 64127 chr11 manual_curation CDS 26205933 26207423 . + 0 Parent=GSCOCT00032825001 | |
| 64128 chr11 manual_curation CDS 26205646 26205810 . + 0 Parent=GSCOCT00032825001 | |
| 64129 chr11 manual_curation CDS 26205386 26205509 . + 2 Parent=GSCOCT00032825001 | |
| 64130 chr11 manual_curation CDS 26204914 26205245 . + 0 Parent=GSCOCT00032825001 | |
| 64131 chr11 manual_curation CDS 26204098 26204820 . + 0 Parent=GSCOCT00032825001 | |
| 64132 chr11 manual_curation CDS 26203077 26203421 . + 0 Parent=GSCOCT00032825001 | |
| 64133 chr11 manual_curation CDS 26202847 26203000 . + 2 Parent=GSCOCT00032825001 | |
| 64134 chr11 manual_curation CDS 26201944 26202714 . + 2 Parent=GSCOCT00032825001 | |
| 64135 chr11 manual_curation CDS 26201025 26201536 . + 0 Parent=GSCOCT00032825001 | |
| 64136 chr11 manual_curation gene 26209924 26213096 . - . ID=GSCOCG00032824001;Name=Cc11_g08800 | |
| 64137 chr11 manual_curation mRNA 26209924 26213096 . - . ID=GSCOCT00032824001;Parent=GSCOCG00032824001;Name=Cc11_g08800 | |
| 64138 chr11 manual_curation polypeptide 26210162 26212998 . - . ID=GSCOCP00032824001;Dbxref=SwissProt:Q6NLC8,TAIR:AT1G66480.1,TAIR:AT1G71015.1,TAIR:AT2G01340.1,TrEMBL:B9HJA1,TrEMBL:B9HW76,TrEMBL:D7T8U4;Derives_from=GSCOCT00032824001;Name=Cc11_g08800;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:modules,CC_gene:At1g66480;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032824001~ unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01340.1)%3B Has 85 Blast hits to 85 proteins in 12 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 85%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ At1g66480~ modules;original_location=join(5129668..5130273%2C5132448..5132504);owner=coffea | |
| 64139 chr11 manual_curation exon 26212393 26213096 . - . Parent=GSCOCT00032824001 | |
| 64140 chr11 manual_curation exon 26209924 26210218 . - . Parent=GSCOCT00032824001 | |
| 64141 chr11 manual_curation CDS 26212393 26212998 . - 0 Parent=GSCOCT00032824001 | |
| 64142 chr11 manual_curation CDS 26210162 26210218 . - 0 Parent=GSCOCT00032824001 | |
| 64143 chr11 manual_curation gene 26215290 26218864 . - . ID=GSCOCG00032823001;Name=Cc11_g08810 | |
| 64144 chr11 manual_curation mRNA 26215290 26218864 . - . ID=GSCOCT00032823001;Parent=GSCOCG00032823001;Name=Cc11_g08810 | |
| 64145 chr11 manual_curation polypeptide 26215620 26218759 . - . ID=GSCOCP00032823001;Dbxref=GENE3D:G3DSA:1.25.10.10,InterPro:IPR000225,InterPro:IPR003613,InterPro:IPR011989,InterPro:IPR016024,PFAM:PF00514,PFAM:PF04564,PROFILE:PS50176,SMART:SM00185,SMART:SM00504,SUPERFAMILY:SSF48371,SwissProt:Q8GUG9,SwissProt:Q9C9A6,SwissProt:Q9SNC6,TAIR:AT1G23030.1,TAIR:AT1G71020.1,TAIR:AT3G46510.1,TrEMBL:B9SJ37,TrEMBL:F6HFJ0,TrEMBL:I1KM32;Derives_from=GSCOCT00032823001;Name=Cc11_g08810;Ontology_term=CC_evidence_code:ISS,GO:0000151,GO:0004842,GO:0005488,GO:0016567,CC_EC_number:missing_EC_number,PRODUCT:U-box domain-containing protein 10,CC_functional_completeness:complete,CC_gene:PUB10,CC_gene:PUB11,CC_gene:PUB13;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032823001~ U-box domain-containing protein 10~ PUB10~ complete;original_location=join(5123907..5124230%2C5125171..5125287%2C5125363..5125821%2C5125976..5127046);owner=coffea | |
| 64146 chr11 manual_curation exon 26218436 26218864 . - . Parent=GSCOCT00032823001 | |
| 64147 chr11 manual_curation exon 26217379 26217495 . - . Parent=GSCOCT00032823001 | |
| 64148 chr11 manual_curation exon 26216845 26217303 . - . Parent=GSCOCT00032823001 | |
| 64149 chr11 manual_curation exon 26215290 26216690 . - . Parent=GSCOCT00032823001 | |
| 64150 chr11 manual_curation CDS 26218436 26218759 . - 0 Parent=GSCOCT00032823001 | |
| 64151 chr11 manual_curation CDS 26217379 26217495 . - 0 Parent=GSCOCT00032823001 | |
| 64152 chr11 manual_curation CDS 26216845 26217303 . - 0 Parent=GSCOCT00032823001 | |
| 64153 chr11 manual_curation CDS 26215620 26216690 . - 0 Parent=GSCOCT00032823001 | |
| 64154 chr11 manual_curation gene 26230551 26232314 . + . ID=GSCOCG00032822001;Name=Cc11_g08820 | |
| 64155 chr11 manual_curation mRNA 26230551 26232314 . + . ID=GSCOCT00032822001;Parent=GSCOCG00032822001;Name=Cc11_g08820 | |
| 64156 chr11 manual_curation polypeptide 26230670 26232038 . + . ID=GSCOCP00032822001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001005,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR014778,InterPro:IPR015495,InterPro:IPR017930,PANTHER:PTHR10641,PFAM:PF00249,PROFILE:PS51294,SMART:SM00717,SUPERFAMILY:SSF46689,SwissProt:Q38851,SwissProt:Q9S9K9,SwissProt:Q9SZP1,TAIR:AT1G22640.1,TAIR:AT2G16720.1,TAIR:AT4G09460.1,TrEMBL:A8VPW4,TrEMBL:D7T8U6,TrEMBL:H9XUG2;Derives_from=GSCOCT00032822001;Name=Cc11_g08820;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative Transcription repressor MYB6,CC_functional_completeness:complete,CC_gene:MYB3,CC_gene:MYB6,CC_gene:MYB4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032822001~ Putative Transcription repressor MYB6~ MYB3~ complete;original_location=complement(join(5111867..5111996%2C5111434..5111563%2C5110628..5111114));owner=coffea | |
| 64157 chr11 manual_curation exon 26231552 26232314 . + . Parent=GSCOCT00032822001 | |
| 64158 chr11 manual_curation exon 26231103 26231232 . + . Parent=GSCOCT00032822001 | |
| 64159 chr11 manual_curation exon 26230551 26230799 . + . Parent=GSCOCT00032822001 | |
| 64160 chr11 manual_curation CDS 26231552 26232038 . + 2 Parent=GSCOCT00032822001 | |
| 64161 chr11 manual_curation CDS 26231103 26231232 . + 1 Parent=GSCOCT00032822001 | |
| 64162 chr11 manual_curation CDS 26230670 26230799 . + 0 Parent=GSCOCT00032822001 | |
| 64163 chr11 manual_curation gene 26236386 26238653 . + . ID=GSCOCG00032821001;Name=Cc11_g08830 | |
| 64164 chr11 manual_curation mRNA 26236386 26238653 . + . ID=GSCOCT00032821001;Parent=GSCOCG00032821001;Name=Cc11_g08830 | |
| 64165 chr11 manual_curation polypeptide 26236476 26238292 . + . ID=GSCOCP00032821001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001005,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR014778,InterPro:IPR015495,InterPro:IPR017930,PANTHER:PTHR10641,PFAM:PF00249,PROFILE:PS51294,SMART:SM00717,SUPERFAMILY:SSF46689,SwissProt:P81395,SwissProt:Q38851,SwissProt:Q9S9K9,TAIR:AT1G22640.1,TAIR:AT2G16720.1,TAIR:AT4G09460.1,TrEMBL:A8VPW4,TrEMBL:D7T8U6,TrEMBL:H9XUG2;Derives_from=GSCOCT00032821001;Name=Cc11_g08830;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:MYB3,CC_gene:MYB6,CC_gene:MYB330;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032821001~ Putative uncharacterized protein~ MYB3~ complete;original_location=complement(join(5106061..5106190%2C5105644..5105773%2C5104374..5104761));owner=coffea | |
| 64166 chr11 manual_curation exon 26237905 26238653 . + . Parent=GSCOCT00032821001 | |
| 64167 chr11 manual_curation exon 26236893 26237022 . + . Parent=GSCOCT00032821001 | |
| 64168 chr11 manual_curation exon 26236386 26236605 . + . Parent=GSCOCT00032821001 | |
| 64169 chr11 manual_curation CDS 26237905 26238292 . + 2 Parent=GSCOCT00032821001 | |
| 64170 chr11 manual_curation CDS 26236893 26237022 . + 1 Parent=GSCOCT00032821001 | |
| 64171 chr11 manual_curation CDS 26236476 26236605 . + 0 Parent=GSCOCT00032821001 | |
| 64172 chr11 manual_curation gene 26243290 26249524 . - . ID=GSCOCG00032820001;Name=Cc11_g08840 | |
| 64173 chr11 manual_curation mRNA 26243290 26249524 . - . ID=GSCOCT00032820001;Parent=GSCOCG00032820001;Name=Cc11_g08840 | |
| 64174 chr11 manual_curation polypeptide 26243526 26249524 . - . ID=GSCOCP00032820001;Dbxref=InterPro:IPR021763,PFAM:PF11805,SwissProt:P08452,TrEMBL:B8LKW4,TrEMBL:B9SYK1,TrEMBL:C5XQU9;Derives_from=GSCOCT00032820001;Name=Cc11_g08840;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterized lipoprotein syc1174_c,CC_functional_completeness:modules,CC_gene:syc1174_c;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032820001~ Uncharacterized lipoprotein syc1174_c~ syc1174_c~ modules;original_location=join(5093142..5093366%2C5093550..5093684%2C5094422..5094538%2C5094705..5094833%2C5095333..5095509%2C5096115..5096255%2C5097353..5097538%2C5098402..5098473%2C5098988..5099140);owner=coffea | |
| 64175 chr11 manual_curation exon 26249300 26249524 . - . Parent=GSCOCT00032820001 | |
| 64176 chr11 manual_curation exon 26248982 26249116 . - . Parent=GSCOCT00032820001 | |
| 64177 chr11 manual_curation exon 26248128 26248244 . - . Parent=GSCOCT00032820001 | |
| 64178 chr11 manual_curation exon 26247833 26247961 . - . Parent=GSCOCT00032820001 | |
| 64179 chr11 manual_curation exon 26247157 26247333 . - . Parent=GSCOCT00032820001 | |
| 64180 chr11 manual_curation exon 26246411 26246551 . - . Parent=GSCOCT00032820001 | |
| 64181 chr11 manual_curation exon 26245128 26245313 . - . Parent=GSCOCT00032820001 | |
| 64182 chr11 manual_curation exon 26244193 26244264 . - . Parent=GSCOCT00032820001 | |
| 64183 chr11 manual_curation exon 26243290 26243678 . - . Parent=GSCOCT00032820001 | |
| 64184 chr11 manual_curation CDS 26249300 26249524 . - 0 Parent=GSCOCT00032820001 | |
| 64185 chr11 manual_curation CDS 26248982 26249116 . - 0 Parent=GSCOCT00032820001 | |
| 64186 chr11 manual_curation CDS 26248128 26248244 . - 0 Parent=GSCOCT00032820001 | |
| 64187 chr11 manual_curation CDS 26247833 26247961 . - 0 Parent=GSCOCT00032820001 | |
| 64188 chr11 manual_curation CDS 26247157 26247333 . - 0 Parent=GSCOCT00032820001 | |
| 64189 chr11 manual_curation CDS 26246411 26246551 . - 0 Parent=GSCOCT00032820001 | |
| 64190 chr11 manual_curation CDS 26245128 26245313 . - 0 Parent=GSCOCT00032820001 | |
| 64191 chr11 manual_curation CDS 26244193 26244264 . - 0 Parent=GSCOCT00032820001 | |
| 64192 chr11 manual_curation CDS 26243526 26243678 . - 0 Parent=GSCOCT00032820001 | |
| 64193 chr11 manual_curation gene 26250838 26256070 . - . ID=GSCOCG00032819001;Name=Cc11_g08850 | |
| 64194 chr11 manual_curation mRNA 26250838 26256070 . - . ID=GSCOCT00032819001;Parent=GSCOCG00032819001;Name=Cc11_g08850 | |
| 64195 chr11 manual_curation polypeptide 26251274 26255849 . - . ID=GSCOCP00032819001;Dbxref=GENE3D:G3DSA:2.60.40.420,InterPro:IPR001117,InterPro:IPR008972,InterPro:IPR011706,InterPro:IPR011707,PFAM:PF00394,PFAM:PF07731,PFAM:PF07732,SUPERFAMILY:SSF49503,SwissProt:P07788,SwissProt:Q12737,SwissProt:Q53692,TAIR:AT1G23010.1,TAIR:AT1G71040.1,TrEMBL:A5AYW5,TrEMBL:D7T8U8,TrEMBL:F6HFJ3;Derives_from=GSCOCT00032819001;Name=Cc11_g08850;Ontology_term=CC_evidence_code:ISS,GO:0005507,GO:0016491,GO:0055114,CC_EC_number:1.3.3.5,PRODUCT:Putative Spore coat protein A,CC_functional_completeness:complete,CC_gene:cotA,CC_gene:phsA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032819001~ Putative Spore coat protein A~ cotA~ complete;original_location=join(5086817..5087026%2C5089132..5090598%2C5091339..5091392);owner=coffea | |
| 64196 chr11 manual_curation exon 26250838 26251053 . - . Parent=GSCOCT00032819001 | |
| 64197 chr11 manual_curation exon 26255640 26256070 . - . Parent=GSCOCT00032819001 | |
| 64198 chr11 manual_curation exon 26252068 26253534 . - . Parent=GSCOCT00032819001 | |
| 64199 chr11 manual_curation exon 26251256 26251327 . - . Parent=GSCOCT00032819001 | |
| 64200 chr11 manual_curation CDS 26255640 26255849 . - 0 Parent=GSCOCT00032819001 | |
| 64201 chr11 manual_curation CDS 26252068 26253534 . - 0 Parent=GSCOCT00032819001 | |
| 64202 chr11 manual_curation CDS 26251274 26251327 . - 0 Parent=GSCOCT00032819001 | |
| 64203 chr11 manual_curation gene 26262263 26264933 . - . ID=GSCOCG00032818001;Name=Cc11_g08860 | |
| 64204 chr11 manual_curation mRNA 26262263 26264933 . - . ID=GSCOCT00032818001;Parent=GSCOCG00032818001;Name=Cc11_g08860 | |
| 64205 chr11 manual_curation polypeptide 26262642 26264454 . - . ID=GSCOCP00032818001;Dbxref=InterPro:IPR006121,PFAM:PF00403,PROFILE:PS50846,SUPERFAMILY:SSF55008,TAIR:AT1G23000.1,TAIR:AT3G06130.1,TAIR:AT5G19090.1,TrEMBL:B9HW82,TrEMBL:B9SYJ7,TrEMBL:F6HFJ4;Derives_from=GSCOCT00032818001;Name=Cc11_g08860;Ontology_term=CC_evidence_code:ISS,GO:0030001,GO:0046872,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032818001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=join(5078212..5078250%2C5078397..5078472%2C5078889..5080024);owner=coffea | |
| 64206 chr11 manual_curation exon 26264416 26264933 . - . Parent=GSCOCT00032818001 | |
| 64207 chr11 manual_curation exon 26264194 26264269 . - . Parent=GSCOCT00032818001 | |
| 64208 chr11 manual_curation exon 26262263 26263777 . - . Parent=GSCOCT00032818001 | |
| 64209 chr11 manual_curation CDS 26264416 26264454 . - 0 Parent=GSCOCT00032818001 | |
| 64210 chr11 manual_curation CDS 26264194 26264269 . - 0 Parent=GSCOCT00032818001 | |
| 64211 chr11 manual_curation CDS 26262642 26263777 . - 1 Parent=GSCOCT00032818001 | |
| 64212 chr11 manual_curation gene 26274900 26276595 . - . ID=GSCOCG00032817001;Name=Cc11_g08870 | |
| 64213 chr11 manual_curation mRNA 26274900 26276595 . - . ID=GSCOCT00032817001;Parent=GSCOCG00032817001;Name=Cc11_g08870 | |
| 64214 chr11 manual_curation polypeptide 26275273 26276472 . - . ID=GSCOCP00032817001;Dbxref=InterPro:IPR006121,PFAM:PF00403,PROFILE:PS50846,SUPERFAMILY:SSF55008,SwissProt:Q9SZN7,TAIR:AT1G22990.1,TAIR:AT1G71050.1,TAIR:AT5G17450.1,TrEMBL:A5BAH0,TrEMBL:B9HW84,TrEMBL:B9SYJ6;Derives_from=GSCOCT00032817001;Name=Cc11_g08870;Ontology_term=CC_evidence_code:ISS,GO:0030001,GO:0046872,CC_EC_number:missing_EC_number,PRODUCT:Putative Heavy metal-associated isoprenylated plant protein 26,CC_functional_completeness:complete,CC_gene:HIPP26;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032817001~ Putative Heavy metal-associated isoprenylated plant protein 26~ HIPP26~ complete;original_location=join(5066194..5066283%2C5066468..5066543%2C5067101..5067393);owner=coffea | |
| 64215 chr11 manual_curation exon 26276383 26276595 . - . Parent=GSCOCT00032817001 | |
| 64216 chr11 manual_curation exon 26276123 26276198 . - . Parent=GSCOCT00032817001 | |
| 64217 chr11 manual_curation exon 26274900 26275565 . - . Parent=GSCOCT00032817001 | |
| 64218 chr11 manual_curation CDS 26276383 26276472 . - 0 Parent=GSCOCT00032817001 | |
| 64219 chr11 manual_curation CDS 26276123 26276198 . - 0 Parent=GSCOCT00032817001 | |
| 64220 chr11 manual_curation CDS 26275273 26275565 . - 1 Parent=GSCOCT00032817001 | |
| 64221 chr11 manual_curation gene 26284974 26289346 . - . ID=GSCOCG00032816001;Name=Cc11_g08880 | |
| 64222 chr11 manual_curation mRNA 26284974 26289346 . - . ID=GSCOCT00032816001;Parent=GSCOCG00032816001;Name=Cc11_g08880 | |
| 64223 chr11 manual_curation polypeptide 26285301 26288824 . - . ID=GSCOCP00032816001;Dbxref=TAIR:AT5G08270.1,TAIR:AT5G23200.1,TrEMBL:B9H5R5,TrEMBL:B9S2Y5,TrEMBL:F6HIS9;Derives_from=GSCOCT00032816001;Name=Cc11_g08880;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032816001~ unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G08270.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(5053842..5053871%2C5054396..5054490%2C5055683..5055957%2C5056554..5057365);owner=coffea | |
| 64224 chr11 manual_curation exon 26289202 26289346 . - . Parent=GSCOCT00032816001 | |
| 64225 chr11 manual_curation exon 26288795 26289014 . - . Parent=GSCOCT00032816001 | |
| 64226 chr11 manual_curation exon 26288176 26288270 . - . Parent=GSCOCT00032816001 | |
| 64227 chr11 manual_curation exon 26286709 26286983 . - . Parent=GSCOCT00032816001 | |
| 64228 chr11 manual_curation exon 26284974 26286112 . - . Parent=GSCOCT00032816001 | |
| 64229 chr11 manual_curation CDS 26288795 26288824 . - 0 Parent=GSCOCT00032816001 | |
| 64230 chr11 manual_curation CDS 26288176 26288270 . - 0 Parent=GSCOCT00032816001 | |
| 64231 chr11 manual_curation CDS 26286709 26286983 . - 2 Parent=GSCOCT00032816001 | |
| 64232 chr11 manual_curation CDS 26285301 26286112 . - 1 Parent=GSCOCT00032816001 | |
| 64233 chr11 manual_curation gene 26294935 26297854 . - . ID=GSCOCG00032814001;Name=Cc11_g08890 | |
| 64234 chr11 manual_curation mRNA 26294935 26297854 . - . ID=GSCOCT00032814001;Parent=GSCOCG00032814001;Name=Cc11_g08890 | |
| 64235 chr11 manual_curation polypeptide 26295179 26297854 . - . ID=GSCOCP00032814001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR008030,InterPro:IPR016040,PFAM:PF05368,SwissProt:P52578,SwissProt:Q15GI3,SwissProt:Q15GI4,TAIR:AT1G75280.1,TAIR:AT1G75290.1,TAIR:AT4G39230.1,TrEMBL:A5AXI7,TrEMBL:B9HHE0,TrEMBL:B9SX28;Derives_from=GSCOCT00032814001;Name=Cc11_g08890;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,CC_EC_number:1.3.1.45,PRODUCT:Isoeugenol synthase 1,CC_functional_completeness:fragment,CC_gene:IGS1,CC_gene:EGS1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032814001~ Isoeugenol synthase 1~ IGS1~ fragment;original_location=join(5044812..5044874%2C5045793..5045927%2C5046107..5046335%2C5046801..5047004%2C5047288..5047487);owner=coffea | |
| 64236 chr11 manual_curation exon 26297792 26297854 . - . Parent=GSCOCT00032814001 | |
| 64237 chr11 manual_curation exon 26296739 26296873 . - . Parent=GSCOCT00032814001 | |
| 64238 chr11 manual_curation exon 26296331 26296559 . - . Parent=GSCOCT00032814001 | |
| 64239 chr11 manual_curation exon 26295662 26295865 . - . Parent=GSCOCT00032814001 | |
| 64240 chr11 manual_curation exon 26294935 26295378 . - . Parent=GSCOCT00032814001 | |
| 64241 chr11 manual_curation CDS 26297792 26297854 . - 0 Parent=GSCOCT00032814001 | |
| 64242 chr11 manual_curation CDS 26296739 26296873 . - 0 Parent=GSCOCT00032814001 | |
| 64243 chr11 manual_curation CDS 26296331 26296559 . - 0 Parent=GSCOCT00032814001 | |
| 64244 chr11 manual_curation CDS 26295662 26295865 . - 1 Parent=GSCOCT00032814001 | |
| 64245 chr11 manual_curation CDS 26295179 26295378 . - 1 Parent=GSCOCT00032814001 | |
| 64246 chr11 manual_curation gene 26302289 26306594 . - . ID=GSCOCG00032813001;Name=Cc11_g08900 | |
| 64247 chr11 manual_curation mRNA 26302289 26306594 . - . ID=GSCOCT00032813001;Parent=GSCOCG00032813001;Name=Cc11_g08900 | |
| 64248 chr11 manual_curation polypeptide 26302805 26306159 . - . ID=GSCOCP00032813001;Dbxref=InterPro:IPR003406,PANTHER:PTHR19297,PFAM:PF02485,SwissProt:Q5QQ57,SwissProt:Q86Y38,SwissProt:Q9EPI1,TAIR:AT1G03520.1,TAIR:AT1G71070.1,TAIR:AT5G39990.1,TrEMBL:B9SYJ3,TrEMBL:D7T8V4,TrEMBL:G7IAS1;Derives_from=GSCOCT00032813001;Name=Cc11_g08900;Ontology_term=CC_evidence_code:ISS,GO:0008375,GO:0016020,CC_EC_number:2.4.2.26,PRODUCT:Core-2/I-branching beta-1%2C6-N-acetylglucosaminyltransferase family protein,CC_functional_completeness:complete,CC_gene:XYLT1,CC_gene:Xylt1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032813001~ Core-2/I-branching beta-1%2C6-N-acetylglucosaminyltransferase family protein~ XYLT1~ complete;original_location=join(5036507..5037014%2C5038971..5039046%2C5039137..5039242%2C5039331..5039861);owner=coffea | |
| 64249 chr11 manual_curation exon 26305652 26306594 . - . Parent=GSCOCT00032813001 | |
| 64250 chr11 manual_curation exon 26303620 26303695 . - . Parent=GSCOCT00032813001 | |
| 64251 chr11 manual_curation exon 26303424 26303529 . - . Parent=GSCOCT00032813001 | |
| 64252 chr11 manual_curation exon 26302289 26303335 . - . Parent=GSCOCT00032813001 | |
| 64253 chr11 manual_curation CDS 26305652 26306159 . - 0 Parent=GSCOCT00032813001 | |
| 64254 chr11 manual_curation CDS 26303620 26303695 . - 1 Parent=GSCOCT00032813001 | |
| 64255 chr11 manual_curation CDS 26303424 26303529 . - 2 Parent=GSCOCT00032813001 | |
| 64256 chr11 manual_curation CDS 26302805 26303335 . - 0 Parent=GSCOCT00032813001 | |
| 64257 chr11 manual_curation gene 26313887 26323341 . + . ID=GSCOCG00032812001;Name=Cc11_g08910 | |
| 64258 chr11 manual_curation mRNA 26313887 26323341 . + . ID=GSCOCT00032812001;Parent=GSCOCG00032812001;Name=Cc11_g08910 | |
| 64259 chr11 manual_curation polypeptide 26314001 26322704 . + . ID=GSCOCP00032812001;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR013525,InterPro:IPR017871,PFAM:PF00005,PFAM:PF01061,PROFILE:PS50893,PROSITE:PS00211,SMART:SM00382,SwissProt:Q05360,SwissProt:Q7XA72,SwissProt:Q9ZU35,TAIR:AT2G01320.3,TAIR:AT3G21090.1,TAIR:AT3G25620.2,TrEMBL:B9HW88,TrEMBL:D7T8V5,TrEMBL:I1LEM3;Derives_from=GSCOCT00032812001;Name=Cc11_g08910;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0016020,GO:0016887,GO:0017111,CC_EC_number:3.6.3.28,CC_EC_number:3.6.3.28,PRODUCT:ABC transporter G family member 7,CC_functional_completeness:complete,CC_gene:ABCG7,CC_gene:ABCG21,CC_gene:W;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032812001~ ABC transporter G family member 7~ ABCG7~ complete;original_location=complement(join(5028414..5028665%2C5027276..5027466%2C5027046..5027196%2C5026677..5026809%2C5026182..5026383%2C5025131..5025404%2C5023825..5023956%2C5022476..5022696%2C5021057..5021269%2C5020838..5020922%2C5020128..5020365%2C5019962..5019993));owner=coffea | |
| 64260 chr11 manual_curation exon 26322673 26323341 . + . Parent=GSCOCT00032812001 | |
| 64261 chr11 manual_curation exon 26322301 26322538 . + . Parent=GSCOCT00032812001 | |
| 64262 chr11 manual_curation exon 26321744 26321828 . + . Parent=GSCOCT00032812001 | |
| 64263 chr11 manual_curation exon 26321397 26321609 . + . Parent=GSCOCT00032812001 | |
| 64264 chr11 manual_curation exon 26319970 26320190 . + . Parent=GSCOCT00032812001 | |
| 64265 chr11 manual_curation exon 26318710 26318841 . + . Parent=GSCOCT00032812001 | |
| 64266 chr11 manual_curation exon 26317262 26317535 . + . Parent=GSCOCT00032812001 | |
| 64267 chr11 manual_curation exon 26316283 26316484 . + . Parent=GSCOCT00032812001 | |
| 64268 chr11 manual_curation exon 26315857 26315989 . + . Parent=GSCOCT00032812001 | |
| 64269 chr11 manual_curation exon 26315470 26315620 . + . Parent=GSCOCT00032812001 | |
| 64270 chr11 manual_curation exon 26315200 26315390 . + . Parent=GSCOCT00032812001 | |
| 64271 chr11 manual_curation exon 26313887 26314252 . + . Parent=GSCOCT00032812001 | |
| 64272 chr11 manual_curation CDS 26322673 26322704 . + 1 Parent=GSCOCT00032812001 | |
| 64273 chr11 manual_curation CDS 26322301 26322538 . + 0 Parent=GSCOCT00032812001 | |
| 64274 chr11 manual_curation CDS 26321744 26321828 . + 2 Parent=GSCOCT00032812001 | |
| 64275 chr11 manual_curation CDS 26321397 26321609 . + 2 Parent=GSCOCT00032812001 | |
| 64276 chr11 manual_curation CDS 26319970 26320190 . + 0 Parent=GSCOCT00032812001 | |
| 64277 chr11 manual_curation CDS 26318710 26318841 . + 0 Parent=GSCOCT00032812001 | |
| 64278 chr11 manual_curation CDS 26317262 26317535 . + 2 Parent=GSCOCT00032812001 | |
| 64279 chr11 manual_curation CDS 26316283 26316484 . + 1 Parent=GSCOCT00032812001 | |
| 64280 chr11 manual_curation CDS 26315857 26315989 . + 0 Parent=GSCOCT00032812001 | |
| 64281 chr11 manual_curation CDS 26315470 26315620 . + 2 Parent=GSCOCT00032812001 | |
| 64282 chr11 manual_curation CDS 26315200 26315390 . + 0 Parent=GSCOCT00032812001 | |
| 64283 chr11 manual_curation CDS 26314001 26314252 . + 0 Parent=GSCOCT00032812001 | |
| 64284 chr11 manual_curation gene 26325480 26325830 . + . ID=GSCOCG00032811001;Name=Cc11_g08920 | |
| 64285 chr11 manual_curation mRNA 26325480 26325830 . + . ID=GSCOCT00032811001;Parent=GSCOCG00032811001;Name=Cc11_g08920 | |
| 64286 chr11 manual_curation polypeptide 26325480 26325830 . + . ID=GSCOCP00032811001;Dbxref=TAIR:AT1G15010.1,TAIR:AT2G01300.1,TrEMBL:B9HJ93,TrEMBL:B9SKT1,TrEMBL:C6TFT5;Derives_from=GSCOCT00032811001;Name=Cc11_g08920;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032811001~ unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15010.1)%3B Has 73 Blast hits to 73 proteins in 12 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 73%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ fragment;original_location=complement(5016836..5017186);owner=coffea | |
| 64287 chr11 manual_curation exon 26325480 26325830 . + . Parent=GSCOCT00032811001 | |
| 64288 chr11 manual_curation CDS 26325480 26325830 . + 0 Parent=GSCOCT00032811001 | |
| 64289 chr11 manual_curation gene 26328180 26328464 . - . ID=GSCOCG00032810001;Name=Cc11_g08930 | |
| 64290 chr11 manual_curation mRNA 26328180 26328464 . - . ID=GSCOCT00032810001;Parent=GSCOCG00032810001;Name=Cc11_g08930 | |
| 64291 chr11 manual_curation polypeptide 26328180 26328464 . - . ID=GSCOCP00032810001;Derives_from=GSCOCT00032810001;Name=Cc11_g08930;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032810001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=5014202..5014486;owner=coffea | |
| 64292 chr11 manual_curation exon 26328180 26328464 . - . Parent=GSCOCT00032810001 | |
| 64293 chr11 manual_curation CDS 26328180 26328464 . - 0 Parent=GSCOCT00032810001 | |
| 64294 chr11 manual_curation gene 26333445 26335981 . + . ID=GSCOCG00032809001;Name=Cc11_g08940 | |
| 64295 chr11 manual_curation mRNA 26333445 26335981 . + . ID=GSCOCT00032809001;Parent=GSCOCG00032809001;Name=Cc11_g08940 | |
| 64296 chr11 manual_curation polypeptide 26334330 26335682 . + . ID=GSCOCP00032809001;Dbxref=InterPro:IPR004776,PFAM:PF03547,SwissProt:O14197,SwissProt:P38355,TAIR:AT1G71090.1,TAIR:AT2G17500.1,TAIR:AT5G01990.1,TrEMBL:B9HJ92,TrEMBL:B9SKS8,TrEMBL:I1N7B8;Derives_from=GSCOCT00032809001;Name=Cc11_g08940;Ontology_term=CC_evidence_code:ISS,GO:0016021,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Auxin efflux carrier family protein,CC_functional_completeness:complete,CC_gene:YBR287W,CC_gene:SPAC5D6.04;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032809001~ Auxin efflux carrier family protein~ YBR287W~ complete;original_location=complement(5006984..5008336);owner=coffea | |
| 64297 chr11 manual_curation exon 26333445 26333784 . + . Parent=GSCOCT00032809001 | |
| 64298 chr11 manual_curation exon 26334252 26335981 . + . Parent=GSCOCT00032809001 | |
| 64299 chr11 manual_curation CDS 26334330 26335682 . + 0 Parent=GSCOCT00032809001 | |
| 64300 chr11 manual_curation gene 26342620 26343447 . + . ID=GSCOCG00032807001;Name=Cc11_g08950 | |
| 64301 chr11 manual_curation mRNA 26342620 26343447 . + . ID=GSCOCT00032807001;Parent=GSCOCG00032807001;Name=Cc11_g08950 | |
| 64302 chr11 manual_curation polypeptide 26342620 26343447 . + . ID=GSCOCP00032807001;Dbxref=HAMAP:MF_00170,InterPro:IPR004788,InterPro:IPR020672,PANTHER:PTHR11934,PFAM:PF06026,SwissProt:B3QCR0,SwissProt:B8FL28,SwissProt:Q9ZU38,TAIR:AT1G71100.1,TAIR:AT2G01290.1,TAIR:AT3G04790.1,TIGRFAMs:TIGR00021,TrEMBL:F6GTY0,TrEMBL:F6HFJ9,TrEMBL:I1NFU4;Derives_from=GSCOCT00032807001;Name=Cc11_g08950;Ontology_term=CC_evidence_code:ISS,GO:0004751,CC_EC_number:5.3.1.6,PRODUCT:Probable ribose-5-phosphate isomerase,CC_functional_completeness:complete,CC_gene:At2g01290,CC_gene:rpiA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032807001~ Probable ribose-5-phosphate isomerase~ At2g01290~ complete;original_location=complement(4999219..5000046);owner=coffea | |
| 64303 chr11 manual_curation exon 26342620 26343447 . + . Parent=GSCOCT00032807001 | |
| 64304 chr11 manual_curation CDS 26342620 26343447 . + 0 Parent=GSCOCT00032807001 | |
| 64305 chr11 manual_curation gene 26348943 26351415 . - . ID=GSCOCG00032805001;Name=Cc11_g08960 | |
| 64306 chr11 manual_curation mRNA 26348943 26351415 . - . ID=GSCOCT00032805001;Parent=GSCOCG00032805001;Name=Cc11_g08960 | |
| 64307 chr11 manual_curation polypeptide 26348943 26351415 . - . ID=GSCOCP00032805001;Dbxref=InterPro:IPR006918,InterPro:IPR008965,PFAM:PF04833,PRODOM:PD140986,SUPERFAMILY:SSF49384,SwissProt:Q8GZ17,SwissProt:Q9FJ13,SwissProt:Q9LIB6,TAIR:AT3G16860.1,TAIR:AT4G16120.1,TAIR:AT5G49270.1,TrEMBL:B9RZK6,TrEMBL:D7SY69,TrEMBL:D7U2E6;Derives_from=GSCOCT00032805001;Name=Cc11_g08960;Ontology_term=CC_evidence_code:ISS,GO:0030246,CC_EC_number:missing_EC_number,PRODUCT:COBRA-like protein 7,CC_functional_completeness:complete,CC_gene:COBL7,CC_gene:COBL9,CC_gene:COBL8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032805001~ COBRA-like protein 7~ COBL7~ complete;original_location=join(4991251..4991809%2C4992300..4993723);owner=coffea | |
| 64308 chr11 manual_curation exon 26350857 26351415 . - . Parent=GSCOCT00032805001 | |
| 64309 chr11 manual_curation exon 26348943 26350366 . - . Parent=GSCOCT00032805001 | |
| 64310 chr11 manual_curation CDS 26350857 26351415 . - 0 Parent=GSCOCT00032805001 | |
| 64311 chr11 manual_curation CDS 26348943 26350366 . - 1 Parent=GSCOCT00032805001 | |
| 64312 chr11 manual_curation gene 26352194 26355446 . - . ID=GSCOCG00032804001;Name=Cc11_g08970 | |
| 64313 chr11 manual_curation mRNA 26352194 26355446 . - . ID=GSCOCT00032804001;Parent=GSCOCG00032804001;Name=Cc11_g08970 | |
| 64314 chr11 manual_curation polypeptide 26352307 26355327 . - . ID=GSCOCP00032804001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q60CZ8,SwissProt:Q6L3Z7,SwissProt:Q6L438,TAIR:AT1G50180.1,TAIR:AT3G46530.1,TAIR:AT3G46730.1,TrEMBL:G8E840,TrEMBL:G8E841,TrEMBL:G8E842;Derives_from=GSCOCT00032804001;Name=Cc11_g08970;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative NB-ARC domain-containing disease resistance protein,CC_functional_completeness:modules,CC_gene:R1A-6,CC_gene:R1A-10,CC_gene:R1B-14;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032804001~ Putative NB-ARC domain-containing disease resistance protein~ R1A-6~ modules;original_location=4987339..4990359;owner=coffea | |
| 64315 chr11 manual_curation exon 26352194 26355446 . - . Parent=GSCOCT00032804001 | |
| 64316 chr11 manual_curation CDS 26352307 26355327 . - 0 Parent=GSCOCT00032804001 | |
| 64317 chr11 manual_curation gene 26358943 26362348 . - . ID=GSCOCG00032803001;Name=Cc11_g08980 | |
| 64318 chr11 manual_curation mRNA 26358943 26362348 . - . ID=GSCOCT00032803001;Parent=GSCOCG00032803001;Name=Cc11_g08980 | |
| 64319 chr11 manual_curation polypeptide 26358943 26361411 . - . ID=GSCOCP00032803001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q60CZ8,SwissProt:Q6L403,SwissProt:Q6L438,TAIR:AT3G46530.1,TAIR:AT3G46730.1,TAIR:AT5G35450.1,TrEMBL:G8E840,TrEMBL:G8E841,TrEMBL:G8E842;Derives_from=GSCOCT00032803001;Name=Cc11_g08980;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1A-6,CC_functional_completeness:fragment,CC_gene:R1A-6,CC_gene:R1A-10,CC_gene:R1B-17;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032803001~ Putative late blight resistance protein homolog R1A-6~ R1A-6~ fragment;original_location=4981255..4983723;owner=coffea | |
| 64320 chr11 manual_curation exon 26362212 26362348 . - . Parent=GSCOCT00032803001 | |
| 64321 chr11 manual_curation exon 26358943 26362013 . - . Parent=GSCOCT00032803001 | |
| 64322 chr11 manual_curation CDS 26358943 26361411 . - 0 Parent=GSCOCT00032803001 | |
| 64323 chr11 manual_curation gene 26368719 26370296 . - . ID=GSCOCG00032801001;Name=Cc11_g08990 | |
| 64324 chr11 manual_curation mRNA 26368719 26370296 . - . ID=GSCOCT00032801001;Parent=GSCOCG00032801001;Name=Cc11_g08990 | |
| 64325 chr11 manual_curation polypeptide 26368887 26370296 . - . ID=GSCOCP00032801001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,PROSITE:PS00375,SwissProt:Q2V6K0,SwissProt:Q40284,SwissProt:Q66PF3,TAIR:AT3G21760.1,TAIR:AT3G21790.1,TAIR:AT4G15280.1,TrEMBL:A5AJE9,TrEMBL:F8WKW9,TrEMBL:F8WKX2;Derives_from=GSCOCT00032801001;Name=Cc11_g08990;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:Putative UDP-glucose flavonoid 3-O-glucosyltransferase 6,CC_functional_completeness:complete,CC_gene:GT6,CC_gene:GT3,CC_gene:GT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032801001~ Putative UDP-glucose flavonoid 3-O-glucosyltransferase 6~ GT6~ complete;original_location=4972370..4973779;owner=coffea | |
| 64326 chr11 manual_curation exon 26368719 26370296 . - . Parent=GSCOCT00032801001 | |
| 64327 chr11 manual_curation CDS 26368887 26370296 . - 0 Parent=GSCOCT00032801001 | |
| 64328 chr11 manual_curation gene 26372609 26373051 . - . ID=GSCOCG00032800001;Name=Cc11_g09000 | |
| 64329 chr11 manual_curation mRNA 26372609 26373051 . - . ID=GSCOCT00032800001;Parent=GSCOCG00032800001;Name=Cc11_g09000 | |
| 64330 chr11 manual_curation polypeptide 26372609 26372863 . - . ID=GSCOCP00032800001;Dbxref=InterPro:IPR001023,InterPro:IPR013126,PANTHER:PTHR19375,PFAM:PF00012,SwissProt:Q9LTX9,TAIR:AT5G49910.1;Derives_from=GSCOCT00032800001;Name=Cc11_g09000;Ontology_term=CC_evidence_code:ISS,GO:0005524,CC_EC_number:missing_EC_number,PRODUCT:Putative Heat shock protein 70,CC_functional_completeness:complete,CC_gene:HSP70,CC_gene:HSP70-6,CC_gene:HSP70-7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032800001~ Putative Heat shock protein 70~ HSP70~ complete;original_location=4969803..4970057;owner=coffea | |
| 64331 chr11 manual_curation exon 26372609 26373051 . - . Parent=GSCOCT00032800001 | |
| 64332 chr11 manual_curation CDS 26372609 26372863 . - 0 Parent=GSCOCT00032800001 | |
| 64333 chr11 manual_curation gene 26373725 26374708 . - . ID=GSCOCG00032799001;Name=Cc11_g09010 | |
| 64334 chr11 manual_curation mRNA 26373725 26374708 . - . ID=GSCOCT00032799001;Parent=GSCOCG00032799001;Name=Cc11_g09010 | |
| 64335 chr11 manual_curation polypeptide 26373725 26374708 . - . ID=GSCOCP00032799001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,PROSITE:PS00375,SwissProt:Q2V6K0,SwissProt:Q40285,SwissProt:Q66PF3,TAIR:AT3G21760.1,TAIR:AT3G21790.1,TAIR:AT4G15280.1,TrEMBL:A5BGZ9,TrEMBL:F8WKW9,TrEMBL:F8WKX2;Derives_from=GSCOCT00032799001;Name=Cc11_g09010;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:Putative UDP-glucose flavonoid 3-O-glucosyltransferase 3,CC_functional_completeness:fragment,CC_gene:GT3,CC_gene:GT6,CC_gene:GT2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032799001~ Putative UDP-glucose flavonoid 3-O-glucosyltransferase 3~ GT3~ fragment;original_location=4967958..4968941;owner=coffea | |
| 64336 chr11 manual_curation exon 26373725 26374708 . - . Parent=GSCOCT00032799001 | |
| 64337 chr11 manual_curation CDS 26373725 26374708 . - 0 Parent=GSCOCT00032799001 | |
| 64338 chr11 manual_curation gene 26378544 26379950 . - . ID=GSCOCG00032798001;Name=Cc11_g09020 | |
| 64339 chr11 manual_curation mRNA 26378544 26379950 . - . ID=GSCOCT00032798001;Parent=GSCOCG00032798001;Name=Cc11_g09020 | |
| 64340 chr11 manual_curation polypeptide 26378544 26379950 . - . ID=GSCOCP00032798001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,PROSITE:PS00375,SwissProt:Q2V6K0,SwissProt:Q40284,SwissProt:Q66PF3,TAIR:AT3G21760.1,TAIR:AT3G21790.1,TAIR:AT4G15280.1,TrEMBL:A5AJE9,TrEMBL:F8WKW9,TrEMBL:F8WKX2;Derives_from=GSCOCT00032798001;Name=Cc11_g09020;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:Putative UDP-glucose flavonoid 3-O-glucosyltransferase 3,CC_functional_completeness:complete,CC_gene:GT3,CC_gene:GT6,CC_gene:GT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032798001~ Putative UDP-glucose flavonoid 3-O-glucosyltransferase 3~ GT3~ complete;original_location=4962716..4964122;owner=coffea | |
| 64341 chr11 manual_curation exon 26378544 26379950 . - . Parent=GSCOCT00032798001 | |
| 64342 chr11 manual_curation CDS 26378544 26379950 . - 0 Parent=GSCOCT00032798001 | |
| 64343 chr11 manual_curation gene 26384128 26385534 . - . ID=GSCOCG00032797001;Name=Cc11_g09030 | |
| 64344 chr11 manual_curation mRNA 26384128 26385534 . - . ID=GSCOCT00032797001;Parent=GSCOCG00032797001;Name=Cc11_g09030 | |
| 64345 chr11 manual_curation polypeptide 26384128 26385534 . - . ID=GSCOCP00032797001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,PROSITE:PS00375,SwissProt:Q2V6K0,SwissProt:Q40284,SwissProt:Q66PF3,TAIR:AT3G21790.1,TAIR:AT3G21800.1,TAIR:AT4G15280.1,TrEMBL:B9S3K7,TrEMBL:F8WKW9,TrEMBL:F8WKX2;Derives_from=GSCOCT00032797001;Name=Cc11_g09030;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:Putative UDP-glucose flavonoid 3-O-glucosyltransferase 3,CC_functional_completeness:complete,CC_gene:GT3,CC_gene:GT6,CC_gene:GT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032797001~ Putative UDP-glucose flavonoid 3-O-glucosyltransferase 3~ GT3~ complete;original_location=4957132..4958538;owner=coffea | |
| 64346 chr11 manual_curation exon 26384128 26385534 . - . Parent=GSCOCT00032797001 | |
| 64347 chr11 manual_curation CDS 26384128 26385534 . - 0 Parent=GSCOCT00032797001 | |
| 64348 chr11 manual_curation gene 26401211 26407058 . + . ID=GSCOCG00032795001;Name=Cc11_g09040 | |
| 64349 chr11 manual_curation mRNA 26401211 26407058 . + . ID=GSCOCT00032795001;Parent=GSCOCG00032795001;Name=Cc11_g09040 | |
| 64350 chr11 manual_curation polypeptide 26401511 26406839 . + . ID=GSCOCP00032795001;Dbxref=TAIR:AT1G71110.1,TAIR:AT2G12400.1,TAIR:AT2G25270.1,TrEMBL:B9HW92,TrEMBL:F6HFK0,TrEMBL:I1LEM9;Derives_from=GSCOCT00032795001;Name=Cc11_g09040;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032795001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G12400.1)%3B Has 173 Blast hits to 169 proteins in 21 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 3%3B Fungi - 0%3B Plants - 165%3B Viruses - 0%3B Other Eukaryotes - 5 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(4941053..4941155%2C4939945..4940135%2C4938571..4938749%2C4937928..4938212%2C4937794..4937852%2C4937558..4937594%2C4937334..4937405%2C4936446..4936770%2C4935827..4936258));owner=coffea | |
| 64351 chr11 manual_curation exon 26406408 26407058 . + . Parent=GSCOCT00032795001 | |
| 64352 chr11 manual_curation exon 26405896 26406220 . + . Parent=GSCOCT00032795001 | |
| 64353 chr11 manual_curation exon 26405261 26405332 . + . Parent=GSCOCT00032795001 | |
| 64354 chr11 manual_curation exon 26405072 26405108 . + . Parent=GSCOCT00032795001 | |
| 64355 chr11 manual_curation exon 26404814 26404872 . + . Parent=GSCOCT00032795001 | |
| 64356 chr11 manual_curation exon 26404454 26404738 . + . Parent=GSCOCT00032795001 | |
| 64357 chr11 manual_curation exon 26403917 26404095 . + . Parent=GSCOCT00032795001 | |
| 64358 chr11 manual_curation exon 26402531 26402721 . + . Parent=GSCOCT00032795001 | |
| 64359 chr11 manual_curation exon 26401211 26401613 . + . Parent=GSCOCT00032795001 | |
| 64360 chr11 manual_curation CDS 26406408 26406839 . + 0 Parent=GSCOCT00032795001 | |
| 64361 chr11 manual_curation CDS 26405896 26406220 . + 2 Parent=GSCOCT00032795001 | |
| 64362 chr11 manual_curation CDS 26405261 26405332 . + 2 Parent=GSCOCT00032795001 | |
| 64363 chr11 manual_curation CDS 26405072 26405108 . + 1 Parent=GSCOCT00032795001 | |
| 64364 chr11 manual_curation CDS 26404814 26404872 . + 2 Parent=GSCOCT00032795001 | |
| 64365 chr11 manual_curation CDS 26404454 26404738 . + 2 Parent=GSCOCT00032795001 | |
| 64366 chr11 manual_curation CDS 26403917 26404095 . + 0 Parent=GSCOCT00032795001 | |
| 64367 chr11 manual_curation CDS 26402531 26402721 . + 1 Parent=GSCOCT00032795001 | |
| 64368 chr11 manual_curation CDS 26401511 26401613 . + 0 Parent=GSCOCT00032795001 | |
| 64369 chr11 manual_curation gene 26409103 26417230 . + . ID=GSCOCG00032794001;Name=Cc11_g09050 | |
| 64370 chr11 manual_curation mRNA 26409103 26417230 . + . ID=GSCOCT00032794001;Parent=GSCOCG00032794001;Name=Cc11_g09050 | |
| 64371 chr11 manual_curation polypeptide 26409103 26416842 . + . ID=GSCOCP00032794001;Dbxref=GENE3D:G3DSA:1.20.120.310,GENE3D:G3DSA:3.40.30.10,InterPro:IPR006863,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR013766,InterPro:IPR017905,InterPro:IPR017936,InterPro:IPR017937,PFAM:PF00085,PFAM:PF04777,PROFILE:PS51324,PROFILE:PS51352,PROSITE:PS00194,SUPERFAMILY:SSF52833,SUPERFAMILY:SSF69000,SwissProt:Q6AUC6,SwissProt:Q8W4J3,SwissProt:Q9ZU40,TAIR:AT1G15020.2,TAIR:AT2G01270.1,TrEMBL:D7T8V9,TrEMBL:E5RKG9,TrEMBL:I1NFT8;Derives_from=GSCOCT00032794001;Name=Cc11_g09050;Ontology_term=CC_evidence_code:ISS,GO:0016972,GO:0045454,GO:0055114,CC_EC_number:5.3.4.1,PRODUCT:Sulfhydryl oxidase 1,CC_functional_completeness:complete,CC_gene:QSOX1,CC_gene:QSOX2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032794001~ Sulfhydryl oxidase 1~ QSOX1~ complete;original_location=complement(join(4933304..4933563%2C4931729..4931753%2C4931513..4931605%2C4930551..4930732%2C4929496..4929565%2C4929327..4929395%2C4929130..4929200%2C4928896..4929052%2C4927894..4927934%2C4926537..4926683%2C4926025..4926462%2C4925824..4925845));owner=coffea | |
| 64372 chr11 manual_curation exon 26416821 26417230 . + . Parent=GSCOCT00032794001 | |
| 64373 chr11 manual_curation exon 26416204 26416641 . + . Parent=GSCOCT00032794001 | |
| 64374 chr11 manual_curation exon 26415983 26416129 . + . Parent=GSCOCT00032794001 | |
| 64375 chr11 manual_curation exon 26414732 26414772 . + . Parent=GSCOCT00032794001 | |
| 64376 chr11 manual_curation exon 26413614 26413770 . + . Parent=GSCOCT00032794001 | |
| 64377 chr11 manual_curation exon 26413466 26413536 . + . Parent=GSCOCT00032794001 | |
| 64378 chr11 manual_curation exon 26413271 26413339 . + . Parent=GSCOCT00032794001 | |
| 64379 chr11 manual_curation exon 26413101 26413170 . + . Parent=GSCOCT00032794001 | |
| 64380 chr11 manual_curation exon 26411934 26412115 . + . Parent=GSCOCT00032794001 | |
| 64381 chr11 manual_curation exon 26411061 26411153 . + . Parent=GSCOCT00032794001 | |
| 64382 chr11 manual_curation exon 26410913 26410937 . + . Parent=GSCOCT00032794001 | |
| 64383 chr11 manual_curation exon 26409103 26409362 . + . Parent=GSCOCT00032794001 | |
| 64384 chr11 manual_curation CDS 26416821 26416842 . + 2 Parent=GSCOCT00032794001 | |
| 64385 chr11 manual_curation CDS 26416204 26416641 . + 2 Parent=GSCOCT00032794001 | |
| 64386 chr11 manual_curation CDS 26415983 26416129 . + 2 Parent=GSCOCT00032794001 | |
| 64387 chr11 manual_curation CDS 26414732 26414772 . + 0 Parent=GSCOCT00032794001 | |
| 64388 chr11 manual_curation CDS 26413614 26413770 . + 2 Parent=GSCOCT00032794001 | |
| 64389 chr11 manual_curation CDS 26413466 26413536 . + 0 Parent=GSCOCT00032794001 | |
| 64390 chr11 manual_curation CDS 26413271 26413339 . + 0 Parent=GSCOCT00032794001 | |
| 64391 chr11 manual_curation CDS 26413101 26413170 . + 2 Parent=GSCOCT00032794001 | |
| 64392 chr11 manual_curation CDS 26411934 26412115 . + 0 Parent=GSCOCT00032794001 | |
| 64393 chr11 manual_curation CDS 26411061 26411153 . + 0 Parent=GSCOCT00032794001 | |
| 64394 chr11 manual_curation CDS 26410913 26410937 . + 2 Parent=GSCOCT00032794001 | |
| 64395 chr11 manual_curation CDS 26409103 26409362 . + 0 Parent=GSCOCT00032794001 | |
| 64396 chr11 manual_curation gene 26418199 26421347 . - . ID=GSCOCG00032793001;Name=Cc11_g09060 | |
| 64397 chr11 manual_curation mRNA 26418199 26421347 . - . ID=GSCOCT00032793001;Parent=GSCOCG00032793001;Name=Cc11_g09060 | |
| 64398 chr11 manual_curation polypeptide 26418700 26421347 . - . ID=GSCOCP00032793001;Dbxref=InterPro:IPR011016,InterPro:IPR018957,InterPro:IPR022143,PFAM:PF00097,PFAM:PF12428,PROFILE:PS51292,SMART:SM00744,TAIR:AT1G14260.1,TAIR:AT2G01275.1,TAIR:AT5G38070.1,TrEMBL:D7T8W0,TrEMBL:D7TSV4,TrEMBL:G7IAT6;Derives_from=GSCOCT00032793001;Name=Cc11_g09060;Ontology_term=CC_evidence_code:ISS,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:RING/FYVE/PHD zinc finger superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032793001~ RING/FYVE/PHD zinc finger superfamily protein~ unknown_gene~ complete;original_location=join(4921319..4921567%2C4922711..4922782%2C4922908..4922975%2C4923074..4923224%2C4923512..4923592%2C4923673..4923762%2C4923868..4923966);owner=coffea | |
| 64399 chr11 manual_curation exon 26421099 26421347 . - . Parent=GSCOCT00032793001 | |
| 64400 chr11 manual_curation exon 26419884 26419955 . - . Parent=GSCOCT00032793001 | |
| 64401 chr11 manual_curation exon 26419691 26419758 . - . Parent=GSCOCT00032793001 | |
| 64402 chr11 manual_curation exon 26419442 26419592 . - . Parent=GSCOCT00032793001 | |
| 64403 chr11 manual_curation exon 26419074 26419154 . - . Parent=GSCOCT00032793001 | |
| 64404 chr11 manual_curation exon 26418904 26418993 . - . Parent=GSCOCT00032793001 | |
| 64405 chr11 manual_curation exon 26418199 26418798 . - . Parent=GSCOCT00032793001 | |
| 64406 chr11 manual_curation CDS 26421099 26421347 . - 0 Parent=GSCOCT00032793001 | |
| 64407 chr11 manual_curation CDS 26419884 26419955 . - 0 Parent=GSCOCT00032793001 | |
| 64408 chr11 manual_curation CDS 26419691 26419758 . - 0 Parent=GSCOCT00032793001 | |
| 64409 chr11 manual_curation CDS 26419442 26419592 . - 2 Parent=GSCOCT00032793001 | |
| 64410 chr11 manual_curation CDS 26419074 26419154 . - 0 Parent=GSCOCT00032793001 | |
| 64411 chr11 manual_curation CDS 26418904 26418993 . - 0 Parent=GSCOCT00032793001 | |
| 64412 chr11 manual_curation CDS 26418700 26418798 . - 0 Parent=GSCOCT00032793001 | |
| 64413 chr11 manual_curation gene 26421436 26422437 . - . ID=GSCOCG00032792001;Name=Cc11_g09070 | |
| 64414 chr11 manual_curation mRNA 26421436 26422437 . - . ID=GSCOCT00032792001;Parent=GSCOCG00032792001;Name=Cc11_g09070 | |
| 64415 chr11 manual_curation polypeptide 26421436 26422437 . - . ID=GSCOCP00032792001;Derives_from=GSCOCT00032792001;Name=Cc11_g09070;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032792001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(4920229..4920381%2C4921204..4921230);owner=coffea | |
| 64416 chr11 manual_curation exon 26422285 26422437 . - . Parent=GSCOCT00032792001 | |
| 64417 chr11 manual_curation exon 26421436 26421462 . - . Parent=GSCOCT00032792001 | |
| 64418 chr11 manual_curation CDS 26422285 26422437 . - 0 Parent=GSCOCT00032792001 | |
| 64419 chr11 manual_curation CDS 26421436 26421462 . - 0 Parent=GSCOCT00032792001 | |
| 64420 chr11 manual_curation gene 26427236 26429371 . + . ID=GSCOCG00032791001;Name=Cc11_g09080 | |
| 64421 chr11 manual_curation mRNA 26427236 26429371 . + . ID=GSCOCT00032791001;Parent=GSCOCG00032791001;Name=Cc11_g09080 | |
| 64422 chr11 manual_curation polypeptide 26427236 26428330 . + . ID=GSCOCP00032791001;Derives_from=GSCOCT00032791001;Name=Cc11_g09080;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032791001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(4915182..4915430%2C4914336..4914443));owner=coffea | |
| 64423 chr11 manual_curation exon 26428223 26429371 . + . Parent=GSCOCT00032791001 | |
| 64424 chr11 manual_curation exon 26427236 26427484 . + . Parent=GSCOCT00032791001 | |
| 64425 chr11 manual_curation CDS 26428223 26428330 . + 0 Parent=GSCOCT00032791001 | |
| 64426 chr11 manual_curation CDS 26427236 26427484 . + 0 Parent=GSCOCT00032791001 | |
| 64427 chr11 manual_curation gene 26431406 26436219 . + . ID=GSCOCG00032790001;Name=Cc11_g09090 | |
| 64428 chr11 manual_curation mRNA 26431406 26436219 . + . ID=GSCOCT00032790001;Parent=GSCOCG00032790001;Name=Cc11_g09090 | |
| 64429 chr11 manual_curation polypeptide 26433195 26435865 . + . ID=GSCOCP00032790001;Dbxref=InterPro:IPR015257,InterPro:IPR017152,PANTHER:PTHR22504,PFAM:PF09174,PIR:PIRSF037240,SwissProt:Q5XIH0,SwissProt:Q7ZWL6,SwissProt:Q9D0U6,TAIR:AT5G13240.1,TrEMBL:B9HW95,TrEMBL:F6HFK1,TrEMBL:G9I821;Derives_from=GSCOCT00032790001;Name=Cc11_g09090;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0016480,GO:0030528,CC_EC_number:missing_EC_number,PRODUCT:Putative Repressor of RNA polymerase III transcription MAF1 homolog,CC_functional_completeness:complete,CC_gene:maf1,CC_gene:Maf1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032790001~ Putative Repressor of RNA polymerase III transcription MAF1 homolog~ maf1~ complete;original_location=complement(join(4909440..4909471%2C4909224..4909294%2C4909084..4909133%2C4908368..4908438%2C4908225..4908287%2C4907806..4907893%2C4907309..4907368%2C4907135..4907214%2C4906970..4907041%2C4906801..4906882));owner=coffea | |
| 64430 chr11 manual_curation exon 26431406 26431645 . + . Parent=GSCOCT00032790001 | |
| 64431 chr11 manual_curation exon 26435784 26436219 . + . Parent=GSCOCT00032790001 | |
| 64432 chr11 manual_curation exon 26435625 26435696 . + . Parent=GSCOCT00032790001 | |
| 64433 chr11 manual_curation exon 26435452 26435531 . + . Parent=GSCOCT00032790001 | |
| 64434 chr11 manual_curation exon 26435298 26435357 . + . Parent=GSCOCT00032790001 | |
| 64435 chr11 manual_curation exon 26434773 26434860 . + . Parent=GSCOCT00032790001 | |
| 64436 chr11 manual_curation exon 26434379 26434441 . + . Parent=GSCOCT00032790001 | |
| 64437 chr11 manual_curation exon 26434228 26434298 . + . Parent=GSCOCT00032790001 | |
| 64438 chr11 manual_curation exon 26433533 26433582 . + . Parent=GSCOCT00032790001 | |
| 64439 chr11 manual_curation exon 26433372 26433442 . + . Parent=GSCOCT00032790001 | |
| 64440 chr11 manual_curation exon 26433140 26433226 . + . Parent=GSCOCT00032790001 | |
| 64441 chr11 manual_curation CDS 26435784 26435865 . + 2 Parent=GSCOCT00032790001 | |
| 64442 chr11 manual_curation CDS 26435625 26435696 . + 2 Parent=GSCOCT00032790001 | |
| 64443 chr11 manual_curation CDS 26435452 26435531 . + 0 Parent=GSCOCT00032790001 | |
| 64444 chr11 manual_curation CDS 26435298 26435357 . + 0 Parent=GSCOCT00032790001 | |
| 64445 chr11 manual_curation CDS 26434773 26434860 . + 2 Parent=GSCOCT00032790001 | |
| 64446 chr11 manual_curation CDS 26434379 26434441 . + 2 Parent=GSCOCT00032790001 | |
| 64447 chr11 manual_curation CDS 26434228 26434298 . + 0 Parent=GSCOCT00032790001 | |
| 64448 chr11 manual_curation CDS 26433533 26433582 . + 1 Parent=GSCOCT00032790001 | |
| 64449 chr11 manual_curation CDS 26433372 26433442 . + 2 Parent=GSCOCT00032790001 | |
| 64450 chr11 manual_curation CDS 26433195 26433226 . + 0 Parent=GSCOCT00032790001 | |
| 64451 chr11 manual_curation gene 26528762 26530141 . - . ID=GSCOCG00032782001;Name=Cc11_g09100 | |
| 64452 chr11 manual_curation mRNA 26528762 26530141 . - . ID=GSCOCT00032782001;Parent=GSCOCG00032782001;Name=Cc11_g09100 | |
| 64453 chr11 manual_curation polypeptide 26529617 26530141 . - . ID=GSCOCP00032782001;Dbxref=TAIR:AT3G03280.1,TAIR:AT5G17350.1,TrEMBL:A9PGX2,TrEMBL:B9HJ87,TrEMBL:F6HFK5;Derives_from=GSCOCT00032782001;Name=Cc11_g09100;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032782001~ Putative unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: N-terminal protein myristoylation%3B LOCATED IN: cellular_component unknown%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17350.1)%3B Has 137 Blast hits to 137 proteins in 11 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 137%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=4812525..4813049;owner=coffea | |
| 64454 chr11 manual_curation exon 26528762 26530141 . - . Parent=GSCOCT00032782001 | |
| 64455 chr11 manual_curation CDS 26529617 26530141 . - 0 Parent=GSCOCT00032782001 | |
| 64456 chr11 manual_curation gene 26537879 26540007 . - . ID=GSCOCG00032781001;Name=Cc11_g09110 | |
| 64457 chr11 manual_curation mRNA 26537879 26540007 . - . ID=GSCOCT00032781001;Parent=GSCOCG00032781001;Name=Cc11_g09110 | |
| 64458 chr11 manual_curation polypeptide 26538117 26540007 . - . ID=GSCOCP00032781001;Dbxref=InterPro:IPR001087,InterPro:IPR008265,PFAM:PF00657,PROSITE:PS01098,SwissProt:O23470,SwissProt:Q9C996,SwissProt:Q9SSA7,TAIR:AT1G53920.1,TAIR:AT1G71120.1,TAIR:AT2G23540.1,TrEMBL:B9T1U8,TrEMBL:D7KYI9,TrEMBL:D7T8W2;Derives_from=GSCOCT00032781001;Name=Cc11_g09110;Ontology_term=CC_evidence_code:ISS,GO:0006629,GO:0016298,CC_EC_number:missing_EC_number,PRODUCT:GDSL esterase/lipase 6,CC_functional_completeness:complete,CC_gene:GLIP6,CC_gene:At4g16230,CC_gene:GLIP5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032781001~ GDSL esterase/lipase 6~ GLIP6~ complete;original_location=join(4802659..4802884%2C4803009..4803154%2C4803254..4803719%2C4804302..4804549);owner=coffea | |
| 64459 chr11 manual_curation exon 26539782 26540007 . - . Parent=GSCOCT00032781001 | |
| 64460 chr11 manual_curation exon 26539512 26539657 . - . Parent=GSCOCT00032781001 | |
| 64461 chr11 manual_curation exon 26538947 26539412 . - . Parent=GSCOCT00032781001 | |
| 64462 chr11 manual_curation exon 26537879 26538364 . - . Parent=GSCOCT00032781001 | |
| 64463 chr11 manual_curation CDS 26539782 26540007 . - 0 Parent=GSCOCT00032781001 | |
| 64464 chr11 manual_curation CDS 26539512 26539657 . - 1 Parent=GSCOCT00032781001 | |
| 64465 chr11 manual_curation CDS 26538947 26539412 . - 0 Parent=GSCOCT00032781001 | |
| 64466 chr11 manual_curation CDS 26538117 26538364 . - 1 Parent=GSCOCT00032781001 | |
| 64467 chr11 manual_curation gene 26541337 26542253 . + . ID=GSCOCG00032780001;Name=Cc11_g09120 | |
| 64468 chr11 manual_curation mRNA 26541337 26542253 . + . ID=GSCOCT00032780001;Parent=GSCOCG00032780001;Name=Cc11_g09120 | |
| 64469 chr11 manual_curation polypeptide 26541381 26542253 . + . ID=GSCOCP00032780001;Dbxref=GENE3D:G3DSA:1.25.40.10,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR019734,PROFILE:PS50005,PROFILE:PS50293,SwissProt:Q5BK48,SwissProt:Q8N0Z6,SwissProt:Q99LG4,TrEMBL:B9T1U9,TrEMBL:I1LEN6,TrEMBL:I1NFT1;Derives_from=GSCOCT00032780001;Name=Cc11_g09120;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:Putative Tetratricopeptide repeat protein 5,CC_functional_completeness:fragment,CC_gene:TTC5,CC_gene:Ttc5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032780001~ Putative Tetratricopeptide repeat protein 5~ TTC5~ fragment;original_location=complement(join(4801111..4801285%2C4800898..4801007%2C4800643..4800753%2C4800413..4800529));owner=coffea | |
| 64470 chr11 manual_curation exon 26542137 26542253 . + . Parent=GSCOCT00032780001 | |
| 64471 chr11 manual_curation exon 26541913 26542023 . + . Parent=GSCOCT00032780001 | |
| 64472 chr11 manual_curation exon 26541659 26541768 . + . Parent=GSCOCT00032780001 | |
| 64473 chr11 manual_curation exon 26541337 26541555 . + . Parent=GSCOCT00032780001 | |
| 64474 chr11 manual_curation CDS 26542137 26542253 . + 0 Parent=GSCOCT00032780001 | |
| 64475 chr11 manual_curation CDS 26541913 26542023 . + 0 Parent=GSCOCT00032780001 | |
| 64476 chr11 manual_curation CDS 26541659 26541768 . + 1 Parent=GSCOCT00032780001 | |
| 64477 chr11 manual_curation CDS 26541381 26541555 . + 0 Parent=GSCOCT00032780001 | |
| 64478 chr11 manual_curation gene 26542489 26548863 . + . ID=GSCOCG00032779001;Name=Cc11_g09130 | |
| 64479 chr11 manual_curation mRNA 26542489 26548863 . + . ID=GSCOCT00032779001;Parent=GSCOCG00032779001;Name=Cc11_g09130 | |
| 64480 chr11 manual_curation polypeptide 26542489 26548510 . + . ID=GSCOCP00032779001;Dbxref=SwissProt:Q5BK48,SwissProt:Q8N0Z6,SwissProt:Q99LG4,TrEMBL:F6HFK6,TrEMBL:I1LEN6,TrEMBL:I1NFT1;Derives_from=GSCOCT00032779001;Name=Cc11_g09130;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Tetratricopeptide repeat protein 5,CC_functional_completeness:fragment,CC_gene:TTC5,CC_gene:Ttc5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032779001~ Putative Tetratricopeptide repeat protein 5~ TTC5~ fragment;original_location=complement(join(4800156..4800177%2C4799359..4799448%2C4798502..4798596%2C4798350..4798403%2C4796736..4796873%2C4795585..4795642%2C4795303..4795417%2C4795083..4795152%2C4794471..4794542%2C4794156..4794272));owner=coffea | |
| 64481 chr11 manual_curation exon 26548394 26548863 . + . Parent=GSCOCT00032779001 | |
| 64482 chr11 manual_curation exon 26548124 26548195 . + . Parent=GSCOCT00032779001 | |
| 64483 chr11 manual_curation exon 26547514 26547583 . + . Parent=GSCOCT00032779001 | |
| 64484 chr11 manual_curation exon 26547249 26547363 . + . Parent=GSCOCT00032779001 | |
| 64485 chr11 manual_curation exon 26547024 26547081 . + . Parent=GSCOCT00032779001 | |
| 64486 chr11 manual_curation exon 26545793 26545930 . + . Parent=GSCOCT00032779001 | |
| 64487 chr11 manual_curation exon 26544263 26544316 . + . Parent=GSCOCT00032779001 | |
| 64488 chr11 manual_curation exon 26544070 26544164 . + . Parent=GSCOCT00032779001 | |
| 64489 chr11 manual_curation exon 26543218 26543307 . + . Parent=GSCOCT00032779001 | |
| 64490 chr11 manual_curation exon 26542489 26542510 . + . Parent=GSCOCT00032779001 | |
| 64491 chr11 manual_curation CDS 26548394 26548510 . + 0 Parent=GSCOCT00032779001 | |
| 64492 chr11 manual_curation CDS 26548124 26548195 . + 0 Parent=GSCOCT00032779001 | |
| 64493 chr11 manual_curation CDS 26547514 26547583 . + 2 Parent=GSCOCT00032779001 | |
| 64494 chr11 manual_curation CDS 26547249 26547363 . + 1 Parent=GSCOCT00032779001 | |
| 64495 chr11 manual_curation CDS 26547024 26547081 . + 0 Parent=GSCOCT00032779001 | |
| 64496 chr11 manual_curation CDS 26545793 26545930 . + 0 Parent=GSCOCT00032779001 | |
| 64497 chr11 manual_curation CDS 26544263 26544316 . + 0 Parent=GSCOCT00032779001 | |
| 64498 chr11 manual_curation CDS 26544070 26544164 . + 1 Parent=GSCOCT00032779001 | |
| 64499 chr11 manual_curation CDS 26543218 26543307 . + 1 Parent=GSCOCT00032779001 | |
| 64500 chr11 manual_curation CDS 26542489 26542510 . + 0 Parent=GSCOCT00032779001 | |
| 64501 chr11 manual_curation gene 26551138 26552886 . + . ID=GSCOCG00032777001;Name=Cc11_g09140 | |
| 64502 chr11 manual_curation mRNA 26551138 26552886 . + . ID=GSCOCT00032777001;Parent=GSCOCG00032777001;Name=Cc11_g09140 | |
| 64503 chr11 manual_curation polypeptide 26551181 26552886 . + . ID=GSCOCP00032777001;Dbxref=InterPro:IPR005299,PFAM:PF03492,SwissProt:Q9FKC8,SwissProt:Q9FKD0,SwissProt:Q9FKR0,TAIR:AT1G15125.1,TAIR:AT3G44840.1,TAIR:AT5G37990.1,TrEMBL:D7T8J5,TrEMBL:D7T8J6,TrEMBL:Q9XI57;Derives_from=GSCOCT00032777001;Name=Cc11_g09140;Ontology_term=CC_evidence_code:ISS,GO:0008168,CC_EC_number:2.1.1.141,PRODUCT:Putative Probable S-adenosylmethionine-dependent methyltransferase At5g37990,CC_functional_completeness:complete,CC_gene:At5g37990,CC_gene:At5g38780,CC_gene:At5g37970;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032777001~ Putative Probable S-adenosylmethionine-dependent methyltransferase At5g37990~ At5g37990~ complete;original_location=complement(join(4791435..4791485%2C4790579..4791238%2C4789780..4790127));owner=coffea | |
| 64504 chr11 manual_curation exon 26552539 26552886 . + . Parent=GSCOCT00032777001 | |
| 64505 chr11 manual_curation exon 26551428 26552087 . + . Parent=GSCOCT00032777001 | |
| 64506 chr11 manual_curation exon 26551138 26551231 . + . Parent=GSCOCT00032777001 | |
| 64507 chr11 manual_curation CDS 26552539 26552886 . + 0 Parent=GSCOCT00032777001 | |
| 64508 chr11 manual_curation CDS 26551428 26552087 . + 0 Parent=GSCOCT00032777001 | |
| 64509 chr11 manual_curation CDS 26551181 26551231 . + 0 Parent=GSCOCT00032777001 | |
| 64510 chr11 manual_curation gene 26553089 26562206 . - . ID=GSCOCG00032776001;Name=Cc11_g09150 | |
| 64511 chr11 manual_curation mRNA 26553089 26562206 . - . ID=GSCOCT00032776001;Parent=GSCOCG00032776001;Name=Cc11_g09150 | |
| 64512 chr11 manual_curation polypeptide 26553468 26561993 . - . ID=GSCOCP00032776001;Dbxref=InterPro:IPR004328,PFAM:PF03097,PROFILE:PS51180,SwissProt:Q8T7K0,SwissProt:Q9QZA2,SwissProt:Q9WU78,TAIR:AT1G15130.1,TrEMBL:B9HJ83,TrEMBL:F6HFK7,TrEMBL:Q75WV0;Derives_from=GSCOCT00032776001;Name=Cc11_g09150;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative ALG-2 interacting protein X,CC_functional_completeness:complete,CC_gene:alxA,CC_gene:Pdcd6ip;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032776001~ Putative ALG-2 interacting protein X~ alxA~ complete;original_location=join(4780673..4781054%2C4781746..4782053%2C4782818..4783771%2C4784446..4784535%2C4785206..4785274%2C4785804..4785944%2C4786968..4787016%2C4787964..4788067%2C4788662..4789198);owner=coffea | |
| 64513 chr11 manual_curation exon 26561612 26562206 . - . Parent=GSCOCT00032776001 | |
| 64514 chr11 manual_curation exon 26560613 26560920 . - . Parent=GSCOCT00032776001 | |
| 64515 chr11 manual_curation exon 26558895 26559848 . - . Parent=GSCOCT00032776001 | |
| 64516 chr11 manual_curation exon 26558131 26558220 . - . Parent=GSCOCT00032776001 | |
| 64517 chr11 manual_curation exon 26557392 26557460 . - . Parent=GSCOCT00032776001 | |
| 64518 chr11 manual_curation exon 26556722 26556862 . - . Parent=GSCOCT00032776001 | |
| 64519 chr11 manual_curation exon 26555650 26555698 . - . Parent=GSCOCT00032776001 | |
| 64520 chr11 manual_curation exon 26554599 26554702 . - . Parent=GSCOCT00032776001 | |
| 64521 chr11 manual_curation exon 26553089 26554004 . - . Parent=GSCOCT00032776001 | |
| 64522 chr11 manual_curation CDS 26561612 26561993 . - 0 Parent=GSCOCT00032776001 | |
| 64523 chr11 manual_curation CDS 26560613 26560920 . - 1 Parent=GSCOCT00032776001 | |
| 64524 chr11 manual_curation CDS 26558895 26559848 . - 0 Parent=GSCOCT00032776001 | |
| 64525 chr11 manual_curation CDS 26558131 26558220 . - 0 Parent=GSCOCT00032776001 | |
| 64526 chr11 manual_curation CDS 26557392 26557460 . - 0 Parent=GSCOCT00032776001 | |
| 64527 chr11 manual_curation CDS 26556722 26556862 . - 0 Parent=GSCOCT00032776001 | |
| 64528 chr11 manual_curation CDS 26555650 26555698 . - 0 Parent=GSCOCT00032776001 | |
| 64529 chr11 manual_curation CDS 26554599 26554702 . - 1 Parent=GSCOCT00032776001 | |
| 64530 chr11 manual_curation CDS 26553468 26554004 . - 0 Parent=GSCOCT00032776001 | |
| 64531 chr11 manual_curation gene 26563156 26566774 . + . ID=GSCOCG00032775001;Name=Cc11_g09160 | |
| 64532 chr11 manual_curation mRNA 26563156 26566774 . + . ID=GSCOCT00032775001;Parent=GSCOCG00032775001;Name=Cc11_g09160 | |
| 64533 chr11 manual_curation polypeptide 26565358 26566362 . + . ID=GSCOCP00032775001;Dbxref=TAIR:AT2G01100.1,TrEMBL:B9HJ82,TrEMBL:C6TN94,TrEMBL:I1LEN8;Derives_from=GSCOCT00032775001;Name=Cc11_g09160;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B Has 19420 Blast hits to 10641 proteins in 779 species,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032775001~ Putative unknown protein%3B Has 19420 Blast hits to 10641 proteins in 779 species: Archae - 0%3B Bacteria - 1003%3B Metazoa - 10257%3B Fungi - 1826%3B Plants - 1570%3B Viruses - 56%3B Other Eukaryotes - 4708 (source: NCBI BLink).~ unknown_gene~ modules;original_location=complement(4776304..4777308);owner=coffea | |
| 64534 chr11 manual_curation exon 26563804 26563894 . + . Parent=GSCOCT00032775001 | |
| 64535 chr11 manual_curation exon 26563156 26563321 . + . Parent=GSCOCT00032775001 | |
| 64536 chr11 manual_curation exon 26565297 26566774 . + . Parent=GSCOCT00032775001 | |
| 64537 chr11 manual_curation CDS 26565358 26566362 . + 0 Parent=GSCOCT00032775001 | |
| 64538 chr11 manual_curation gene 26566943 26571045 . - . ID=GSCOCG00032774001;Name=Cc11_g09170 | |
| 64539 chr11 manual_curation mRNA 26566943 26571045 . - . ID=GSCOCT00032774001;Parent=GSCOCG00032774001;Name=Cc11_g09170 | |
| 64540 chr11 manual_curation polypeptide 26567500 26570384 . - . ID=GSCOCP00032774001;Dbxref=InterPro:IPR001221,InterPro:IPR001433,PFAM:PF00175,PRINTS:PR00410,SwissProt:P43394,TAIR:AT1G15140.1,TrEMBL:A5AYU9,TrEMBL:B9T1V7,TrEMBL:F6HFK9;Derives_from=GSCOCT00032774001;Name=Cc11_g09170;Ontology_term=CC_evidence_code:ISS,GO:0016491,GO:0055114,CC_EC_number:missing_EC_number,PRODUCT:Fruit protein pKIWI502,CC_functional_completeness:fragment,CC_gene:pKIWI502;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032774001~ Fruit protein pKIWI502~ pKIWI502~ fragment;original_location=join(4772282..4772367%2C4774061..4774160%2C4774290..4774385%2C4774551..4774631%2C4775104..4775166);owner=coffea | |
| 64541 chr11 manual_curation exon 26570299 26571045 . - . Parent=GSCOCT00032774001 | |
| 64542 chr11 manual_curation exon 26568506 26568605 . - . Parent=GSCOCT00032774001 | |
| 64543 chr11 manual_curation exon 26568281 26568376 . - . Parent=GSCOCT00032774001 | |
| 64544 chr11 manual_curation exon 26568035 26568115 . - . Parent=GSCOCT00032774001 | |
| 64545 chr11 manual_curation exon 26566943 26567562 . - . Parent=GSCOCT00032774001 | |
| 64546 chr11 manual_curation CDS 26570299 26570384 . - 0 Parent=GSCOCT00032774001 | |
| 64547 chr11 manual_curation CDS 26568506 26568605 . - 2 Parent=GSCOCT00032774001 | |
| 64548 chr11 manual_curation CDS 26568281 26568376 . - 0 Parent=GSCOCT00032774001 | |
| 64549 chr11 manual_curation CDS 26568035 26568115 . - 0 Parent=GSCOCT00032774001 | |
| 64550 chr11 manual_curation CDS 26567500 26567562 . - 0 Parent=GSCOCT00032774001 | |
| 64551 chr11 manual_curation gene 26571588 26575747 . - . ID=GSCOCG00032773001;Name=Cc11_g09180 | |
| 64552 chr11 manual_curation mRNA 26571588 26575747 . - . ID=GSCOCT00032773001;Parent=GSCOCG00032773001;Name=Cc11_g09180 | |
| 64553 chr11 manual_curation polypeptide 26572040 26575235 . - . ID=GSCOCP00032773001;Dbxref=HAMAP:MF_01347,InterPro:IPR000194,InterPro:IPR000793,InterPro:IPR003593,InterPro:IPR005722,InterPro:IPR020003,PANTHER:PTHR15184:SF8,PFAM:PF00006,PFAM:PF00306,PROSITE:PS00152,SMART:SM00382,SUPERFAMILY:SSF47917,TAIR:AT1G20260.1,TAIR:ATCG00480.1,TIGRFAMs:TIGR01039;Derives_from=GSCOCT00032773001;Name=Cc11_g09180;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0015986,GO:0017111,CC_EC_number:3.6.3.14,PRODUCT:ATP synthase subunit beta,CC_functional_completeness:complete,CC_gene:ATPB,CC_gene:At5g08680,CC_gene:At5g08690,CC_gene:At5g08670;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032773001~ ATP synthase subunit beta~ ATPB~ complete;original_location=join(4767431..4767493%2C4768253..4768328%2C4768419..4768507%2C4768654..4768771%2C4768864..4768967%2C4769060..4769218%2C4769386..4769610%2C4769691..4770002%2C4770513..4770626);owner=coffea | |
| 64554 chr11 manual_curation exon 26575173 26575747 . - . Parent=GSCOCT00032773001 | |
| 64555 chr11 manual_curation exon 26574338 26574413 . - . Parent=GSCOCT00032773001 | |
| 64556 chr11 manual_curation exon 26574159 26574247 . - . Parent=GSCOCT00032773001 | |
| 64557 chr11 manual_curation exon 26573895 26574012 . - . Parent=GSCOCT00032773001 | |
| 64558 chr11 manual_curation exon 26573699 26573802 . - . Parent=GSCOCT00032773001 | |
| 64559 chr11 manual_curation exon 26573448 26573606 . - . Parent=GSCOCT00032773001 | |
| 64560 chr11 manual_curation exon 26573056 26573280 . - . Parent=GSCOCT00032773001 | |
| 64561 chr11 manual_curation exon 26572664 26572975 . - . Parent=GSCOCT00032773001 | |
| 64562 chr11 manual_curation exon 26571588 26572153 . - . Parent=GSCOCT00032773001 | |
| 64563 chr11 manual_curation CDS 26575173 26575235 . - 0 Parent=GSCOCT00032773001 | |
| 64564 chr11 manual_curation CDS 26574338 26574413 . - 0 Parent=GSCOCT00032773001 | |
| 64565 chr11 manual_curation CDS 26574159 26574247 . - 1 Parent=GSCOCT00032773001 | |
| 64566 chr11 manual_curation CDS 26573895 26574012 . - 0 Parent=GSCOCT00032773001 | |
| 64567 chr11 manual_curation CDS 26573699 26573802 . - 1 Parent=GSCOCT00032773001 | |
| 64568 chr11 manual_curation CDS 26573448 26573606 . - 0 Parent=GSCOCT00032773001 | |
| 64569 chr11 manual_curation CDS 26573056 26573280 . - 0 Parent=GSCOCT00032773001 | |
| 64570 chr11 manual_curation CDS 26572664 26572975 . - 0 Parent=GSCOCT00032773001 | |
| 64571 chr11 manual_curation CDS 26572040 26572153 . - 0 Parent=GSCOCT00032773001 | |
| 64572 chr11 manual_curation gene 26580908 26583399 . + . ID=GSCOCG00032772001;Name=Cc11_g09190 | |
| 64573 chr11 manual_curation mRNA 26580908 26583399 . + . ID=GSCOCT00032772001;Parent=GSCOCG00032772001;Name=Cc11_g09190 | |
| 64574 chr11 manual_curation polypeptide 26580977 26583150 . + . ID=GSCOCP00032772001;Dbxref=GENE3D:G3DSA:2.60.40.1490,InterPro:IPR006818,PANTHER:PTHR12040,PFAM:PF04729,SUPERFAMILY:SSF101546,SwissProt:Q9C9M6,SwissProt:Q9LS09,SwissProt:Q9V464,TAIR:AT1G66740.1,TAIR:AT5G38110.1,TrEMBL:A5AT73,TrEMBL:B7FJE1,TrEMBL:G7J8L0;Derives_from=GSCOCT00032772001;Name=Cc11_g09190;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0006333,CC_EC_number:missing_EC_number,PRODUCT:Histone chaperone ASF1B,CC_functional_completeness:complete,CC_gene:ASF1B,CC_gene:ASF1A,CC_gene:asf1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032772001~ Histone chaperone ASF1B~ ASF1B~ complete;original_location=complement(join(4761581..4761689%2C4759982..4760097%2C4759516..4759875));owner=coffea | |
| 64575 chr11 manual_curation exon 26582791 26583399 . + . Parent=GSCOCT00032772001 | |
| 64576 chr11 manual_curation exon 26582569 26582684 . + . Parent=GSCOCT00032772001 | |
| 64577 chr11 manual_curation exon 26580908 26581085 . + . Parent=GSCOCT00032772001 | |
| 64578 chr11 manual_curation CDS 26582791 26583150 . + 0 Parent=GSCOCT00032772001 | |
| 64579 chr11 manual_curation CDS 26582569 26582684 . + 1 Parent=GSCOCT00032772001 | |
| 64580 chr11 manual_curation CDS 26580977 26581085 . + 0 Parent=GSCOCT00032772001 | |
| 64581 chr11 manual_curation gene 26587781 26589473 . + . ID=GSCOCG00032771001;Name=Cc11_g09200 | |
| 64582 chr11 manual_curation mRNA 26587781 26589473 . + . ID=GSCOCT00032771001;Parent=GSCOCG00032771001;Name=Cc11_g09200 | |
| 64583 chr11 manual_curation polypeptide 26587781 26589473 . + . ID=GSCOCP00032771001;Dbxref=InterPro:IPR006941,InterPro:IPR012337,PFAM:PF04857,SUPERFAMILY:SSF53098,SwissProt:Q9FMS6,SwissProt:Q9LEU4,SwissProt:Q9LXM2,TAIR:AT3G44260.1,TAIR:AT5G10960.1,TAIR:AT5G22250.1,TrEMBL:C4P742,TrEMBL:I1LTY5,TrEMBL:I1M4A3;Derives_from=GSCOCT00032771001;Name=Cc11_g09200;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0005634,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable CCR4-associated factor 1 homolog 9,CC_functional_completeness:fragment,CC_gene:CAF1-9,CC_gene:CAF1-11,CC_gene:CAF1-10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032771001~ Putative Probable CCR4-associated factor 1 homolog 9~ CAF1-9~ fragment;original_location=complement(join(4754731..4754885%2C4754297..4754313%2C4753193..4753338));owner=coffea | |
| 64584 chr11 manual_curation exon 26589328 26589473 . + . Parent=GSCOCT00032771001 | |
| 64585 chr11 manual_curation exon 26588353 26588369 . + . Parent=GSCOCT00032771001 | |
| 64586 chr11 manual_curation exon 26587781 26587935 . + . Parent=GSCOCT00032771001 | |
| 64587 chr11 manual_curation CDS 26589328 26589473 . + 1 Parent=GSCOCT00032771001 | |
| 64588 chr11 manual_curation CDS 26588353 26588369 . + 2 Parent=GSCOCT00032771001 | |
| 64589 chr11 manual_curation CDS 26587781 26587935 . + 0 Parent=GSCOCT00032771001 | |
| 64590 chr11 manual_curation gene 26589911 26594518 . - . ID=GSCOCG00032770001;Name=Cc11_g09210 | |
| 64591 chr11 manual_curation mRNA 26589911 26594518 . - . ID=GSCOCT00032770001;Parent=GSCOCG00032770001;Name=Cc11_g09210 | |
| 64592 chr11 manual_curation polypeptide 26590176 26594272 . - . ID=GSCOCP00032770001;Dbxref=InterPro:IPR002528,InterPro:IPR015521,PANTHER:PTHR11206,PANTHER:PTHR11206:SF11,PFAM:PF01554,SwissProt:Q8RWF5,SwissProt:Q9SIA1,SwissProt:Q9SIA5,TAIR:AT1G73700.1,TAIR:AT2G34360.1,TAIR:AT5G52450.1,TIGRFAMs:TIGR00797,TrEMBL:B9HWA3,TrEMBL:B9T1V9,TrEMBL:G7IAW6;Derives_from=GSCOCT00032770001;Name=Cc11_g09210;Ontology_term=CC_evidence_code:ISS,GO:0006855,GO:0015238,GO:0015297,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Putative MATE efflux family protein 9,CC_functional_completeness:complete,CC_gene:DTXL5,CC_gene:DTXL4,CC_gene:DTX1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032770001~ Putative MATE efflux family protein 9~ DTXL5~ complete;original_location=join(4748394..4748675%2C4749570..4750114%2C4750361..4750447%2C4750598..4750654%2C4750834..4751072%2C4751181..4751299%2C4751390..4751476%2C4752440..4752490);owner=coffea | |
| 64593 chr11 manual_curation exon 26593991 26594518 . - . Parent=GSCOCT00032770001 | |
| 64594 chr11 manual_curation exon 26592552 26593096 . - . Parent=GSCOCT00032770001 | |
| 64595 chr11 manual_curation exon 26592219 26592305 . - . Parent=GSCOCT00032770001 | |
| 64596 chr11 manual_curation exon 26592012 26592068 . - . Parent=GSCOCT00032770001 | |
| 64597 chr11 manual_curation exon 26591594 26591832 . - . Parent=GSCOCT00032770001 | |
| 64598 chr11 manual_curation exon 26591367 26591485 . - . Parent=GSCOCT00032770001 | |
| 64599 chr11 manual_curation exon 26591190 26591276 . - . Parent=GSCOCT00032770001 | |
| 64600 chr11 manual_curation exon 26589911 26590226 . - . Parent=GSCOCT00032770001 | |
| 64601 chr11 manual_curation CDS 26593991 26594272 . - 0 Parent=GSCOCT00032770001 | |
| 64602 chr11 manual_curation CDS 26592552 26593096 . - 0 Parent=GSCOCT00032770001 | |
| 64603 chr11 manual_curation CDS 26592219 26592305 . - 2 Parent=GSCOCT00032770001 | |
| 64604 chr11 manual_curation CDS 26592012 26592068 . - 2 Parent=GSCOCT00032770001 | |
| 64605 chr11 manual_curation CDS 26591594 26591832 . - 2 Parent=GSCOCT00032770001 | |
| 64606 chr11 manual_curation CDS 26591367 26591485 . - 1 Parent=GSCOCT00032770001 | |
| 64607 chr11 manual_curation CDS 26591190 26591276 . - 0 Parent=GSCOCT00032770001 | |
| 64608 chr11 manual_curation CDS 26590176 26590226 . - 0 Parent=GSCOCT00032770001 | |
| 64609 chr11 manual_curation gene 26600667 26606078 . + . ID=GSCOCG00032768001;Name=Cc11_g09220 | |
| 64610 chr11 manual_curation mRNA 26600667 26606078 . + . ID=GSCOCT00032768001;Parent=GSCOCG00032768001;Name=Cc11_g09220 | |
| 64611 chr11 manual_curation polypeptide 26600909 26605537 . + . ID=GSCOCP00032768001;Dbxref=InterPro:IPR002528,InterPro:IPR015521,PANTHER:PTHR11206,PANTHER:PTHR11206:SF11,PFAM:PF01554,SwissProt:Q8RWF5,SwissProt:Q9SIA4,SwissProt:Q9SIA5,TAIR:AT1G15150.1,TAIR:AT1G15160.1,TAIR:AT1G15170.1,TIGRFAMs:TIGR00797,TrEMBL:A5ARU5,TrEMBL:B9HWA4,TrEMBL:F6HFL1;Derives_from=GSCOCT00032768001;Name=Cc11_g09220;Ontology_term=CC_evidence_code:ISS,GO:0006855,GO:0015238,GO:0015297,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:MATE efflux family protein 5,CC_functional_completeness:complete,CC_gene:DTXL1,CC_gene:DTXL5,CC_gene:DTX1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032768001~ MATE efflux family protein 5~ DTXL1~ complete;original_location=complement(join(4741623..4741757%2C4738298..4738842%2C4738115..4738201%2C4737960..4738016%2C4737624..4737862%2C4737302..4737507%2C4737129..4737191));owner=coffea | |
| 64612 chr11 manual_curation exon 26605475 26606078 . + . Parent=GSCOCT00032768001 | |
| 64613 chr11 manual_curation exon 26605159 26605364 . + . Parent=GSCOCT00032768001 | |
| 64614 chr11 manual_curation exon 26604804 26605042 . + . Parent=GSCOCT00032768001 | |
| 64615 chr11 manual_curation exon 26604650 26604706 . + . Parent=GSCOCT00032768001 | |
| 64616 chr11 manual_curation exon 26604465 26604551 . + . Parent=GSCOCT00032768001 | |
| 64617 chr11 manual_curation exon 26603824 26604368 . + . Parent=GSCOCT00032768001 | |
| 64618 chr11 manual_curation exon 26600667 26601043 . + . Parent=GSCOCT00032768001 | |
| 64619 chr11 manual_curation CDS 26605475 26605537 . + 0 Parent=GSCOCT00032768001 | |
| 64620 chr11 manual_curation CDS 26605159 26605364 . + 1 Parent=GSCOCT00032768001 | |
| 64621 chr11 manual_curation CDS 26604804 26605042 . + 2 Parent=GSCOCT00032768001 | |
| 64622 chr11 manual_curation CDS 26604650 26604706 . + 2 Parent=GSCOCT00032768001 | |
| 64623 chr11 manual_curation CDS 26604465 26604551 . + 2 Parent=GSCOCT00032768001 | |
| 64624 chr11 manual_curation CDS 26603824 26604368 . + 0 Parent=GSCOCT00032768001 | |
| 64625 chr11 manual_curation CDS 26600909 26601043 . + 0 Parent=GSCOCT00032768001 | |
| 64626 chr11 manual_curation gene 26619373 26623923 . + . ID=GSCOCG00032765001;Name=Cc11_g09230 | |
| 64627 chr11 manual_curation mRNA 26619373 26623923 . + . ID=GSCOCT00032765001;Parent=GSCOCG00032765001;Name=Cc11_g09230 | |
| 64628 chr11 manual_curation polypeptide 26619373 26623923 . + . ID=GSCOCP00032765001;Dbxref=InterPro:IPR002528,InterPro:IPR015521,PANTHER:PTHR11206,PANTHER:PTHR11206:SF11,PFAM:PF01554,SwissProt:Q8RWF5,SwissProt:Q9SIA4,SwissProt:Q9SIA5,TAIR:AT1G15150.1,TAIR:AT1G15160.1,TAIR:AT1G71140.1,TIGRFAMs:TIGR00797,TrEMBL:B9HWA4,TrEMBL:B9T1W0,TrEMBL:F6HFL1;Derives_from=GSCOCT00032765001;Name=Cc11_g09230;Ontology_term=CC_evidence_code:ISS,GO:0006855,GO:0015238,GO:0015297,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:MATE efflux family protein DTX1,CC_functional_completeness:complete,CC_gene:DTX1,CC_gene:DTXL1,CC_gene:DTXL5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032765001~ MATE efflux family protein DTX1~ DTX1~ complete;original_location=complement(join(4723054..4723293%2C4719785..4720329%2C4719610..4719696%2C4719455..4719511%2C4719123..4719361%2C4718743..4719005));owner=coffea | |
| 64629 chr11 manual_curation exon 26623661 26623923 . + . Parent=GSCOCT00032765001 | |
| 64630 chr11 manual_curation exon 26623305 26623543 . + . Parent=GSCOCT00032765001 | |
| 64631 chr11 manual_curation exon 26623155 26623211 . + . Parent=GSCOCT00032765001 | |
| 64632 chr11 manual_curation exon 26622970 26623056 . + . Parent=GSCOCT00032765001 | |
| 64633 chr11 manual_curation exon 26622337 26622881 . + . Parent=GSCOCT00032765001 | |
| 64634 chr11 manual_curation exon 26619373 26619612 . + . Parent=GSCOCT00032765001 | |
| 64635 chr11 manual_curation CDS 26623661 26623923 . + 1 Parent=GSCOCT00032765001 | |
| 64636 chr11 manual_curation CDS 26623305 26623543 . + 2 Parent=GSCOCT00032765001 | |
| 64637 chr11 manual_curation CDS 26623155 26623211 . + 2 Parent=GSCOCT00032765001 | |
| 64638 chr11 manual_curation CDS 26622970 26623056 . + 2 Parent=GSCOCT00032765001 | |
| 64639 chr11 manual_curation CDS 26622337 26622881 . + 0 Parent=GSCOCT00032765001 | |
| 64640 chr11 manual_curation CDS 26619373 26619612 . + 0 Parent=GSCOCT00032765001 | |
| 64641 chr11 manual_curation gene 26641774 26646650 . + . ID=GSCOCG00032763001;Name=Cc11_g09240 | |
| 64642 chr11 manual_curation mRNA 26641774 26646650 . + . ID=GSCOCT00032763001;Parent=GSCOCG00032763001;Name=Cc11_g09240 | |
| 64643 chr11 manual_curation polypeptide 26641884 26646026 . + . ID=GSCOCP00032763001;Dbxref=InterPro:IPR002528,InterPro:IPR015521,PANTHER:PTHR11206,PANTHER:PTHR11206:SF11,PFAM:PF01554,SwissProt:Q8GXM8,SwissProt:Q9SIA3,SwissProt:Q9SIA5,TAIR:AT1G15150.1,TAIR:AT1G15160.1,TAIR:AT1G71140.1,TIGRFAMs:TIGR00797,TrEMBL:A5ARU5,TrEMBL:B9HWA4,TrEMBL:F6HFL1;Derives_from=GSCOCT00032763001;Name=Cc11_g09240;Ontology_term=CC_evidence_code:ISS,GO:0006855,GO:0015238,GO:0015297,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:MATE efflux family protein DTX1,CC_functional_completeness:complete,CC_gene:DTX1,CC_gene:DTXL3,CC_gene:DTXL2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032763001~ MATE efflux family protein DTX1~ DTX1~ complete;original_location=complement(join(4700543..4700782%2C4697793..4698337%2C4697611..4697697%2C4697465..4697521%2C4697131..4697369%2C4696804..4697009%2C4696640..4696702));owner=coffea | |
| 64644 chr11 manual_curation exon 26645964 26646650 . + . Parent=GSCOCT00032763001 | |
| 64645 chr11 manual_curation exon 26645657 26645862 . + . Parent=GSCOCT00032763001 | |
| 64646 chr11 manual_curation exon 26645297 26645535 . + . Parent=GSCOCT00032763001 | |
| 64647 chr11 manual_curation exon 26645145 26645201 . + . Parent=GSCOCT00032763001 | |
| 64648 chr11 manual_curation exon 26644969 26645055 . + . Parent=GSCOCT00032763001 | |
| 64649 chr11 manual_curation exon 26644329 26644873 . + . Parent=GSCOCT00032763001 | |
| 64650 chr11 manual_curation exon 26641774 26642123 . + . Parent=GSCOCT00032763001 | |
| 64651 chr11 manual_curation CDS 26645964 26646026 . + 0 Parent=GSCOCT00032763001 | |
| 64652 chr11 manual_curation CDS 26645657 26645862 . + 1 Parent=GSCOCT00032763001 | |
| 64653 chr11 manual_curation CDS 26645297 26645535 . + 2 Parent=GSCOCT00032763001 | |
| 64654 chr11 manual_curation CDS 26645145 26645201 . + 2 Parent=GSCOCT00032763001 | |
| 64655 chr11 manual_curation CDS 26644969 26645055 . + 2 Parent=GSCOCT00032763001 | |
| 64656 chr11 manual_curation CDS 26644329 26644873 . + 0 Parent=GSCOCT00032763001 | |
| 64657 chr11 manual_curation CDS 26641884 26642123 . + 0 Parent=GSCOCT00032763001 | |
| 64658 chr11 manual_curation gene 26655187 26659017 . + . ID=GSCOCG00032761001;Name=Cc11_g09250 | |
| 64659 chr11 manual_curation mRNA 26655187 26659017 . + . ID=GSCOCT00032761001;Parent=GSCOCG00032761001;Name=Cc11_g09250 | |
| 64660 chr11 manual_curation polypeptide 26655305 26659017 . + . ID=GSCOCP00032761001;Dbxref=InterPro:IPR002528,InterPro:IPR015521,PANTHER:PTHR11206,PANTHER:PTHR11206:SF11,PFAM:PF01554,SwissProt:Q8GXM8,SwissProt:Q9SIA4,SwissProt:Q9SIA5,TAIR:AT1G15150.1,TAIR:AT1G15160.1,TAIR:AT1G71140.1,TIGRFAMs:TIGR00797,TrEMBL:A5ARU5,TrEMBL:B9HWA4,TrEMBL:F6HFL1;Derives_from=GSCOCT00032761001;Name=Cc11_g09250;Ontology_term=CC_evidence_code:ISS,GO:0006855,GO:0015238,GO:0015297,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Putative MATE efflux family protein DTX1,CC_functional_completeness:complete,CC_gene:DTX1,CC_gene:DTXL3,CC_gene:DTXL1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032761001~ Putative MATE efflux family protein DTX1~ DTX1~ complete;original_location=complement(join(4687122..4687361%2C4684840..4685384%2C4684664..4684750%2C4684519..4684575%2C4684181..4684419%2C4683830..4684041%2C4683649..4683711));owner=coffea | |
| 64661 chr11 manual_curation exon 26658955 26659017 . + . Parent=GSCOCT00032761001 | |
| 64662 chr11 manual_curation exon 26658625 26658836 . + . Parent=GSCOCT00032761001 | |
| 64663 chr11 manual_curation exon 26658247 26658485 . + . Parent=GSCOCT00032761001 | |
| 64664 chr11 manual_curation exon 26658091 26658147 . + . Parent=GSCOCT00032761001 | |
| 64665 chr11 manual_curation exon 26657916 26658002 . + . Parent=GSCOCT00032761001 | |
| 64666 chr11 manual_curation exon 26657282 26657826 . + . Parent=GSCOCT00032761001 | |
| 64667 chr11 manual_curation exon 26655187 26655544 . + . Parent=GSCOCT00032761001 | |
| 64668 chr11 manual_curation CDS 26658955 26659017 . + 0 Parent=GSCOCT00032761001 | |
| 64669 chr11 manual_curation CDS 26658625 26658836 . + 1 Parent=GSCOCT00032761001 | |
| 64670 chr11 manual_curation CDS 26658247 26658485 . + 2 Parent=GSCOCT00032761001 | |
| 64671 chr11 manual_curation CDS 26658091 26658147 . + 2 Parent=GSCOCT00032761001 | |
| 64672 chr11 manual_curation CDS 26657916 26658002 . + 2 Parent=GSCOCT00032761001 | |
| 64673 chr11 manual_curation CDS 26657282 26657826 . + 0 Parent=GSCOCT00032761001 | |
| 64674 chr11 manual_curation CDS 26655305 26655544 . + 0 Parent=GSCOCT00032761001 | |
| 64675 chr11 manual_curation gene 26661731 26664893 . + . ID=GSCOCG00032759001;Name=Cc11_g09260 | |
| 64676 chr11 manual_curation mRNA 26661731 26664893 . + . ID=GSCOCT00032759001;Parent=GSCOCG00032759001;Name=Cc11_g09260 | |
| 64677 chr11 manual_curation polypeptide 26661796 26664893 . + . ID=GSCOCP00032759001;Dbxref=TAIR:AT1G22970.1,TAIR:AT1G22980.1,TAIR:AT1G71150.1,TrEMBL:B9HJ78,TrEMBL:B9T1W5,TrEMBL:D7T8X3;Derives_from=GSCOCT00032759001;Name=Cc11_g09260;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032759001~ unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G71150.1)%3B Has 134 Blast hits to 132 proteins in 48 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 66%3B Fungi - 10%3B Plants - 48%3B Viruses - 0%3B Other Eukaryotes - 10 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(4680793..4680870%2C4680599..4680692%2C4679752..4679961%2C4677773..4678488));owner=coffea | |
| 64678 chr11 manual_curation exon 26664178 26664893 . + . Parent=GSCOCT00032759001 | |
| 64679 chr11 manual_curation exon 26662705 26662914 . + . Parent=GSCOCT00032759001 | |
| 64680 chr11 manual_curation exon 26661974 26662067 . + . Parent=GSCOCT00032759001 | |
| 64681 chr11 manual_curation exon 26661731 26661873 . + . Parent=GSCOCT00032759001 | |
| 64682 chr11 manual_curation CDS 26664178 26664893 . + 1 Parent=GSCOCT00032759001 | |
| 64683 chr11 manual_curation CDS 26662705 26662914 . + 1 Parent=GSCOCT00032759001 | |
| 64684 chr11 manual_curation CDS 26661974 26662067 . + 0 Parent=GSCOCT00032759001 | |
| 64685 chr11 manual_curation CDS 26661796 26661873 . + 0 Parent=GSCOCT00032759001 | |
| 64686 chr11 manual_curation gene 26665106 26670754 . - . ID=GSCOCG00032758001;Name=Cc11_g09270 | |
| 64687 chr11 manual_curation mRNA 26665106 26670754 . - . ID=GSCOCT00032758001;Parent=GSCOCG00032758001;Name=Cc11_g09270 | |
| 64688 chr11 manual_curation polypeptide 26665815 26670566 . - . ID=GSCOCP00032758001;Dbxref=InterPro:IPR002033,InterPro:IPR019820,InterPro:IPR019822,PFAM:PF00902,PRINTS:PR01840,PROSITE:PS01218,SwissProt:O78493,SwissProt:P54086,SwissProt:Q6B8S9,TAIR:AT2G01110.1,TIGRFAMs:TIGR00945,TrEMBL:D7LR00,TrEMBL:I1LEQ3,TrEMBL:I1LEQ4;Derives_from=GSCOCT00032758001;Name=Cc11_g09270;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Sec-independent protein translocase protein TatC,CC_functional_completeness:modules,CC_gene:tatC,CC_gene:ycf43;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032758001~ Sec-independent protein translocase protein TatC~ tatC~ modules;original_location=join(4672100..4672373%2C4674869..4675176%2C4675977..4676267%2C4676642..4676851);owner=coffea | |
| 64689 chr11 manual_curation exon 26670293 26670754 . - . Parent=GSCOCT00032758001 | |
| 64690 chr11 manual_curation exon 26667490 26667797 . - . Parent=GSCOCT00032758001 | |
| 64691 chr11 manual_curation exon 26666399 26666689 . - . Parent=GSCOCT00032758001 | |
| 64692 chr11 manual_curation exon 26665106 26666024 . - . Parent=GSCOCT00032758001 | |
| 64693 chr11 manual_curation CDS 26670293 26670566 . - 0 Parent=GSCOCT00032758001 | |
| 64694 chr11 manual_curation CDS 26667490 26667797 . - 1 Parent=GSCOCT00032758001 | |
| 64695 chr11 manual_curation CDS 26666399 26666689 . - 0 Parent=GSCOCT00032758001 | |
| 64696 chr11 manual_curation CDS 26665815 26666024 . - 0 Parent=GSCOCT00032758001 | |
| 64697 chr11 manual_curation gene 26682864 26688314 . + . ID=GSCOCG00032757001;Name=Cc11_g09280 | |
| 64698 chr11 manual_curation mRNA 26682864 26688314 . + . ID=GSCOCT00032757001;Parent=GSCOCG00032757001;Name=Cc11_g09280 | |
| 64699 chr11 manual_curation polypeptide 26682864 26687923 . + . ID=GSCOCP00032757001;Dbxref=InterPro:IPR003959,InterPro:IPR016527,PFAM:PF00004,PIR:PIRSF007858,SwissProt:O93479,SwissProt:Q2YDI2,SwissProt:Q4U3P8,TAIR:AT2G01120.2,TrEMBL:B9HJ77,TrEMBL:C5XGS6,TrEMBL:F6HFL3;Derives_from=GSCOCT00032757001;Name=Cc11_g09280;Ontology_term=CC_evidence_code:ISS,GO:0000808,GO:0003677,GO:0005524,GO:0005634,GO:0006260,CC_EC_number:missing_EC_number,PRODUCT:Putative Origin recognition complex subunit 4,CC_functional_completeness:complete,CC_gene:ORC4,CC_gene:orc4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032757001~ Putative Origin recognition complex subunit 4~ ORC4~ complete;original_location=complement(join(4659693..4659802%2C4659436..4659526%2C4659264..4659320%2C4659076..4659123%2C4658630..4658680%2C4658507..4658550%2C4658316..4658379%2C4658144..4658230%2C4657488..4657579%2C4657321..4657402%2C4656768..4656853%2C4656574..4656683%2C4655464..4655556%2C4655310..4655374%2C4655075..4655218%2C4654743..4654784));owner=coffea | |
| 64700 chr11 manual_curation exon 26687882 26688314 . + . Parent=GSCOCT00032757001 | |
| 64701 chr11 manual_curation exon 26687448 26687591 . + . Parent=GSCOCT00032757001 | |
| 64702 chr11 manual_curation exon 26687292 26687356 . + . Parent=GSCOCT00032757001 | |
| 64703 chr11 manual_curation exon 26687110 26687202 . + . Parent=GSCOCT00032757001 | |
| 64704 chr11 manual_curation exon 26685983 26686092 . + . Parent=GSCOCT00032757001 | |
| 64705 chr11 manual_curation exon 26685813 26685898 . + . Parent=GSCOCT00032757001 | |
| 64706 chr11 manual_curation exon 26685264 26685345 . + . Parent=GSCOCT00032757001 | |
| 64707 chr11 manual_curation exon 26685087 26685178 . + . Parent=GSCOCT00032757001 | |
| 64708 chr11 manual_curation exon 26684436 26684522 . + . Parent=GSCOCT00032757001 | |
| 64709 chr11 manual_curation exon 26684287 26684350 . + . Parent=GSCOCT00032757001 | |
| 64710 chr11 manual_curation exon 26684116 26684159 . + . Parent=GSCOCT00032757001 | |
| 64711 chr11 manual_curation exon 26683986 26684036 . + . Parent=GSCOCT00032757001 | |
| 64712 chr11 manual_curation exon 26683543 26683590 . + . Parent=GSCOCT00032757001 | |
| 64713 chr11 manual_curation exon 26683346 26683402 . + . Parent=GSCOCT00032757001 | |
| 64714 chr11 manual_curation exon 26683140 26683230 . + . Parent=GSCOCT00032757001 | |
| 64715 chr11 manual_curation exon 26682864 26682973 . + . Parent=GSCOCT00032757001 | |
| 64716 chr11 manual_curation CDS 26687882 26687923 . + 0 Parent=GSCOCT00032757001 | |
| 64717 chr11 manual_curation CDS 26687448 26687591 . + 0 Parent=GSCOCT00032757001 | |
| 64718 chr11 manual_curation CDS 26687292 26687356 . + 1 Parent=GSCOCT00032757001 | |
| 64719 chr11 manual_curation CDS 26687110 26687202 . + 1 Parent=GSCOCT00032757001 | |
| 64720 chr11 manual_curation CDS 26685983 26686092 . + 2 Parent=GSCOCT00032757001 | |
| 64721 chr11 manual_curation CDS 26685813 26685898 . + 0 Parent=GSCOCT00032757001 | |
| 64722 chr11 manual_curation CDS 26685264 26685345 . + 2 Parent=GSCOCT00032757001 | |
| 64723 chr11 manual_curation CDS 26685087 26685178 . + 0 Parent=GSCOCT00032757001 | |
| 64724 chr11 manual_curation CDS 26684436 26684522 . + 0 Parent=GSCOCT00032757001 | |
| 64725 chr11 manual_curation CDS 26684287 26684350 . + 2 Parent=GSCOCT00032757001 | |
| 64726 chr11 manual_curation CDS 26684116 26684159 . + 0 Parent=GSCOCT00032757001 | |
| 64727 chr11 manual_curation CDS 26683986 26684036 . + 0 Parent=GSCOCT00032757001 | |
| 64728 chr11 manual_curation CDS 26683543 26683590 . + 0 Parent=GSCOCT00032757001 | |
| 64729 chr11 manual_curation CDS 26683346 26683402 . + 0 Parent=GSCOCT00032757001 | |
| 64730 chr11 manual_curation CDS 26683140 26683230 . + 2 Parent=GSCOCT00032757001 | |
| 64731 chr11 manual_curation CDS 26682864 26682973 . + 0 Parent=GSCOCT00032757001 | |
| 64732 chr11 manual_curation gene 26692559 26694823 . + . ID=GSCOCG00032756001;Name=Cc11_g09290 | |
| 64733 chr11 manual_curation mRNA 26692559 26694823 . + . ID=GSCOCT00032756001;Parent=GSCOCG00032756001;Name=Cc11_g09290 | |
| 64734 chr11 manual_curation polypeptide 26692559 26694823 . + . ID=GSCOCP00032756001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:P0C7Q9,SwissProt:Q9FIX3,SwissProt:Q9LFC5,TAIR:AT1G22960.1,TAIR:AT5G01110.1,TAIR:AT5G39710.1,TIGRFAMs:TIGR00756,TrEMBL:B9SJZ3,TrEMBL:F6HFL4,TrEMBL:I1MA86;Derives_from=GSCOCT00032756001;Name=Cc11_g09290;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Pentatricopeptide repeat-containing protein At1g22960%2C mitochondrial,CC_functional_completeness:complete,CC_gene:At1g22960,CC_gene:At5g01110,CC_gene:EMB2745;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032756001~ Putative Pentatricopeptide repeat-containing protein At1g22960%2C mitochondrial~ At1g22960~ complete;original_location=complement(4647843..4650107);owner=coffea | |
| 64735 chr11 manual_curation exon 26692559 26694823 . + . Parent=GSCOCT00032756001 | |
| 64736 chr11 manual_curation CDS 26692559 26694823 . + 0 Parent=GSCOCT00032756001 | |
| 64737 chr11 manual_curation gene 26701632 26703918 . + . ID=GSCOCG00032754001;Name=Cc11_g09300 | |
| 64738 chr11 manual_curation mRNA 26701632 26703918 . + . ID=GSCOCT00032754001;Parent=GSCOCG00032754001;Name=Cc11_g09300 | |
| 64739 chr11 manual_curation polypeptide 26701632 26703918 . + . ID=GSCOCP00032754001;Dbxref=InterPro:IPR002864,PFAM:PF01643,SwissProt:Q39473,SwissProt:Q39513,SwissProt:Q9SQI3,TAIR:AT1G08510.1,TAIR:AT3G25110.1,TAIR:AT4G13050.1,TrEMBL:B9HWA9,TrEMBL:B9SJZ2,TrEMBL:F6HFL5;Derives_from=GSCOCT00032754001;Name=Cc11_g09300;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative fatA acyl-ACP thioesterase,CC_functional_completeness:modules,CC_gene:FATB1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032754001~ Putative fatA acyl-ACP thioesterase~ FATB1~ modules;original_location=complement(join(4640672..4641034%2C4640463..4640596%2C4639591..4639704%2C4639340..4639508%2C4639198..4639266%2C4638748..4639089));owner=coffea | |
| 64740 chr11 manual_curation exon 26703577 26703918 . + . Parent=GSCOCT00032754001 | |
| 64741 chr11 manual_curation exon 26703400 26703468 . + . Parent=GSCOCT00032754001 | |
| 64742 chr11 manual_curation exon 26703158 26703326 . + . Parent=GSCOCT00032754001 | |
| 64743 chr11 manual_curation exon 26702962 26703075 . + . Parent=GSCOCT00032754001 | |
| 64744 chr11 manual_curation exon 26702070 26702203 . + . Parent=GSCOCT00032754001 | |
| 64745 chr11 manual_curation exon 26701632 26701994 . + . Parent=GSCOCT00032754001 | |
| 64746 chr11 manual_curation CDS 26703577 26703918 . + 0 Parent=GSCOCT00032754001 | |
| 64747 chr11 manual_curation CDS 26703400 26703468 . + 0 Parent=GSCOCT00032754001 | |
| 64748 chr11 manual_curation CDS 26703158 26703326 . + 2 Parent=GSCOCT00032754001 | |
| 64749 chr11 manual_curation CDS 26702962 26703075 . + 2 Parent=GSCOCT00032754001 | |
| 64750 chr11 manual_curation CDS 26702070 26702203 . + 0 Parent=GSCOCT00032754001 | |
| 64751 chr11 manual_curation CDS 26701632 26701994 . + 0 Parent=GSCOCT00032754001 | |
| 64752 chr11 manual_curation gene 26716345 26723900 . - . ID=GSCOCG00032753001;Name=Cc11_g09310 | |
| 64753 chr11 manual_curation mRNA 26716345 26723900 . - . ID=GSCOCT00032753001;Parent=GSCOCG00032753001;Name=Cc11_g09310 | |
| 64754 chr11 manual_curation polypeptide 26716727 26723299 . - . ID=GSCOCP00032753001;Dbxref=InterPro:IPR004277,PANTHER:PTHR12615,PFAM:PF03034,SwissProt:E7EY42,SwissProt:O08888,SwissProt:Q9BVG9,TAIR:AT1G15110.2,TrEMBL:D7T8X7,TrEMBL:F6GTS4,TrEMBL:I1LEQ7;Derives_from=GSCOCT00032753001;Name=Cc11_g09310;Ontology_term=CC_evidence_code:ISS,GO:0006659,CC_EC_number:missing_EC_number,PRODUCT:Putative Phosphatidylserine synthase 2,CC_functional_completeness:complete,CC_gene:ptdss2,CC_gene:PTDSS2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032753001~ Putative Phosphatidylserine synthase 2~ ptdss2~ complete;original_location=join(4619367..4619530%2C4620840..4620905%2C4621003..4621062%2C4621740..4621830%2C4622293..4622347%2C4622487..4622566%2C4622701..4622817%2C4622905..4622989%2C4623833..4623924%2C4625184..4625437%2C4625576..4625664%2C4625812..4625939);owner=coffea | |
| 64755 chr11 manual_curation exon 26723136 26723900 . - . Parent=GSCOCT00032753001 | |
| 64756 chr11 manual_curation exon 26721761 26721826 . - . Parent=GSCOCT00032753001 | |
| 64757 chr11 manual_curation exon 26721604 26721663 . - . Parent=GSCOCT00032753001 | |
| 64758 chr11 manual_curation exon 26720836 26720926 . - . Parent=GSCOCT00032753001 | |
| 64759 chr11 manual_curation exon 26720319 26720373 . - . Parent=GSCOCT00032753001 | |
| 64760 chr11 manual_curation exon 26720100 26720179 . - . Parent=GSCOCT00032753001 | |
| 64761 chr11 manual_curation exon 26719849 26719965 . - . Parent=GSCOCT00032753001 | |
| 64762 chr11 manual_curation exon 26719677 26719761 . - . Parent=GSCOCT00032753001 | |
| 64763 chr11 manual_curation exon 26718742 26718833 . - . Parent=GSCOCT00032753001 | |
| 64764 chr11 manual_curation exon 26717229 26717482 . - . Parent=GSCOCT00032753001 | |
| 64765 chr11 manual_curation exon 26717002 26717090 . - . Parent=GSCOCT00032753001 | |
| 64766 chr11 manual_curation exon 26716345 26716854 . - . Parent=GSCOCT00032753001 | |
| 64767 chr11 manual_curation CDS 26723136 26723299 . - 0 Parent=GSCOCT00032753001 | |
| 64768 chr11 manual_curation CDS 26721761 26721826 . - 2 Parent=GSCOCT00032753001 | |
| 64769 chr11 manual_curation CDS 26721604 26721663 . - 2 Parent=GSCOCT00032753001 | |
| 64770 chr11 manual_curation CDS 26720836 26720926 . - 2 Parent=GSCOCT00032753001 | |
| 64771 chr11 manual_curation CDS 26720319 26720373 . - 0 Parent=GSCOCT00032753001 | |
| 64772 chr11 manual_curation CDS 26720100 26720179 . - 1 Parent=GSCOCT00032753001 | |
| 64773 chr11 manual_curation CDS 26719849 26719965 . - 0 Parent=GSCOCT00032753001 | |
| 64774 chr11 manual_curation CDS 26719677 26719761 . - 0 Parent=GSCOCT00032753001 | |
| 64775 chr11 manual_curation CDS 26718742 26718833 . - 1 Parent=GSCOCT00032753001 | |
| 64776 chr11 manual_curation CDS 26717229 26717482 . - 0 Parent=GSCOCT00032753001 | |
| 64777 chr11 manual_curation CDS 26717002 26717090 . - 2 Parent=GSCOCT00032753001 | |
| 64778 chr11 manual_curation CDS 26716727 26716854 . - 1 Parent=GSCOCT00032753001 | |
| 64779 chr11 manual_curation gene 26731746 26746509 . - . ID=GSCOCG00032751001;Name=Cc11_g09320 | |
| 64780 chr11 manual_curation mRNA 26731746 26746509 . - . ID=GSCOCT00032751001;Parent=GSCOCG00032751001;Name=Cc11_g09320 | |
| 64781 chr11 manual_curation polypeptide 26732293 26746243 . - . ID=GSCOCP00032751001;Dbxref=GENE3D:G3DSA:3.30.160.20,InterPro:IPR001159,InterPro:IPR001650,InterPro:IPR002464,InterPro:IPR007502,InterPro:IPR011545,InterPro:IPR011709,InterPro:IPR014001,InterPro:IPR014021,InterPro:IPR014720,PFAM:PF00035,PFAM:PF00270,PFAM:PF00271,PFAM:PF04408,PFAM:PF07717,PROFILE:PS50137,PROFILE:PS51192,PROFILE:PS51194,PROSITE:PS00690,SMART:SM00358,SMART:SM00487,SMART:SM00490,SMART:SM00847,SwissProt:Q6P158,SwissProt:Q8VHK9,SwissProt:Q9H2U1,TAIR:AT1G48650.2,TAIR:AT2G01130.1,TAIR:AT5G04895.1,TrEMBL:B9HWB1,TrEMBL:B9SJY8,TrEMBL:D7T8X8;Derives_from=GSCOCT00032751001;Name=Cc11_g09320;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0003723,GO:0003725,GO:0004386,GO:0005524,GO:0005622,GO:0008026,CC_EC_number:missing_EC_number,PRODUCT:DEA(D/H)-box RNA helicase family protein,CC_functional_completeness:complete,CC_gene:Dhx36,CC_gene:DHX36,CC_gene:DHX57;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032751001~ DEA(D/H)-box RNA helicase family protein~ Dhx36~ complete;original_location=join(4596423..4596719%2C4598121..4598275%2C4598361..4598448%2C4598828..4599058%2C4600817..4600912%2C4601833..4602021%2C4602112..4602271%2C4602353..4602483%2C4603277..4603444%2C4603532..4603804%2C4604881..4605075%2C4606115..4606318%2C4606494..4606563%2C4606680..4606828%2C4608492..4608797%2C4609084..4609143%2C4609222..4609374%2C4609586..4609696%2C4609906..4610373);owner=coffea | |
| 64782 chr11 manual_curation exon 26745947 26746509 . - . Parent=GSCOCT00032751001 | |
| 64783 chr11 manual_curation exon 26744391 26744545 . - . Parent=GSCOCT00032751001 | |
| 64784 chr11 manual_curation exon 26744218 26744305 . - . Parent=GSCOCT00032751001 | |
| 64785 chr11 manual_curation exon 26743608 26743838 . - . Parent=GSCOCT00032751001 | |
| 64786 chr11 manual_curation exon 26741754 26741849 . - . Parent=GSCOCT00032751001 | |
| 64787 chr11 manual_curation exon 26740645 26740833 . - . Parent=GSCOCT00032751001 | |
| 64788 chr11 manual_curation exon 26740395 26740554 . - . Parent=GSCOCT00032751001 | |
| 64789 chr11 manual_curation exon 26740183 26740313 . - . Parent=GSCOCT00032751001 | |
| 64790 chr11 manual_curation exon 26739222 26739389 . - . Parent=GSCOCT00032751001 | |
| 64791 chr11 manual_curation exon 26738862 26739134 . - . Parent=GSCOCT00032751001 | |
| 64792 chr11 manual_curation exon 26737591 26737785 . - . Parent=GSCOCT00032751001 | |
| 64793 chr11 manual_curation exon 26736348 26736551 . - . Parent=GSCOCT00032751001 | |
| 64794 chr11 manual_curation exon 26736103 26736172 . - . Parent=GSCOCT00032751001 | |
| 64795 chr11 manual_curation exon 26735838 26735986 . - . Parent=GSCOCT00032751001 | |
| 64796 chr11 manual_curation exon 26733869 26734174 . - . Parent=GSCOCT00032751001 | |
| 64797 chr11 manual_curation exon 26733523 26733582 . - . Parent=GSCOCT00032751001 | |
| 64798 chr11 manual_curation exon 26733292 26733444 . - . Parent=GSCOCT00032751001 | |
| 64799 chr11 manual_curation exon 26732970 26733080 . - . Parent=GSCOCT00032751001 | |
| 64800 chr11 manual_curation exon 26731746 26732760 . - . Parent=GSCOCT00032751001 | |
| 64801 chr11 manual_curation CDS 26745947 26746243 . - 0 Parent=GSCOCT00032751001 | |
| 64802 chr11 manual_curation CDS 26744391 26744545 . - 0 Parent=GSCOCT00032751001 | |
| 64803 chr11 manual_curation CDS 26744218 26744305 . - 2 Parent=GSCOCT00032751001 | |
| 64804 chr11 manual_curation CDS 26743608 26743838 . - 0 Parent=GSCOCT00032751001 | |
| 64805 chr11 manual_curation CDS 26741754 26741849 . - 0 Parent=GSCOCT00032751001 | |
| 64806 chr11 manual_curation CDS 26740645 26740833 . - 0 Parent=GSCOCT00032751001 | |
| 64807 chr11 manual_curation CDS 26740395 26740554 . - 0 Parent=GSCOCT00032751001 | |
| 64808 chr11 manual_curation CDS 26740183 26740313 . - 1 Parent=GSCOCT00032751001 | |
| 64809 chr11 manual_curation CDS 26739222 26739389 . - 0 Parent=GSCOCT00032751001 | |
| 64810 chr11 manual_curation CDS 26738862 26739134 . - 0 Parent=GSCOCT00032751001 | |
| 64811 chr11 manual_curation CDS 26737591 26737785 . - 0 Parent=GSCOCT00032751001 | |
| 64812 chr11 manual_curation CDS 26736348 26736551 . - 0 Parent=GSCOCT00032751001 | |
| 64813 chr11 manual_curation CDS 26736103 26736172 . - 0 Parent=GSCOCT00032751001 | |
| 64814 chr11 manual_curation CDS 26735838 26735986 . - 1 Parent=GSCOCT00032751001 | |
| 64815 chr11 manual_curation CDS 26733869 26734174 . - 0 Parent=GSCOCT00032751001 | |
| 64816 chr11 manual_curation CDS 26733523 26733582 . - 0 Parent=GSCOCT00032751001 | |
| 64817 chr11 manual_curation CDS 26733292 26733444 . - 0 Parent=GSCOCT00032751001 | |
| 64818 chr11 manual_curation CDS 26732970 26733080 . - 0 Parent=GSCOCT00032751001 | |
| 64819 chr11 manual_curation CDS 26732293 26732760 . - 0 Parent=GSCOCT00032751001 | |
| 64820 chr11 manual_curation gene 26747568 26751414 . - . ID=GSCOCG00032750001;Name=Cc11_g09330 | |
| 64821 chr11 manual_curation mRNA 26747568 26751414 . - . ID=GSCOCT00032750001;Parent=GSCOCG00032750001;Name=Cc11_g09330 | |
| 64822 chr11 manual_curation polypeptide 26747809 26751183 . - . ID=GSCOCP00032750001;Dbxref=GENE3D:G3DSA:3.20.20.70,InterPro:IPR000741,InterPro:IPR013785,PANTHER:PTHR11627,PFAM:PF00274,PROSITE:PS00158,SwissProt:Q01516,SwissProt:Q944G9,SwissProt:Q9ZU52,TAIR:AT2G01140.1,TAIR:AT2G21330.1,TAIR:AT4G38970.1,TrEMBL:B9HJ73,TrEMBL:B9SJY9,TrEMBL:F8V2Y3;Derives_from=GSCOCT00032750001;Name=Cc11_g09330;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004332,GO:0006096,GO:0008152,CC_EC_number:4.1.2.13,PRODUCT:Probable fructose-bisphosphate aldolase 3%2C chloroplastic,CC_functional_completeness:complete,CC_gene:FBA3,CC_gene:FBA2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032750001~ Probable fructose-bisphosphate aldolase 3%2C chloroplastic~ FBA3~ complete;original_location=join(4591483..4591647%2C4592654..4592923%2C4593006..4593115%2C4593235..4593325%2C4593422..4593691%2C4594579..4594857);owner=coffea | |
| 64823 chr11 manual_curation exon 26751019 26751414 . - . Parent=GSCOCT00032750001 | |
| 64824 chr11 manual_curation exon 26749743 26750012 . - . Parent=GSCOCT00032750001 | |
| 64825 chr11 manual_curation exon 26749551 26749660 . - . Parent=GSCOCT00032750001 | |
| 64826 chr11 manual_curation exon 26749341 26749431 . - . Parent=GSCOCT00032750001 | |
| 64827 chr11 manual_curation exon 26748975 26749244 . - . Parent=GSCOCT00032750001 | |
| 64828 chr11 manual_curation exon 26747568 26748087 . - . Parent=GSCOCT00032750001 | |
| 64829 chr11 manual_curation CDS 26751019 26751183 . - 0 Parent=GSCOCT00032750001 | |
| 64830 chr11 manual_curation CDS 26749743 26750012 . - 0 Parent=GSCOCT00032750001 | |
| 64831 chr11 manual_curation CDS 26749551 26749660 . - 0 Parent=GSCOCT00032750001 | |
| 64832 chr11 manual_curation CDS 26749341 26749431 . - 2 Parent=GSCOCT00032750001 | |
| 64833 chr11 manual_curation CDS 26748975 26749244 . - 0 Parent=GSCOCT00032750001 | |
| 64834 chr11 manual_curation CDS 26747809 26748087 . - 0 Parent=GSCOCT00032750001 | |
| 64835 chr11 manual_curation gene 26756859 26763282 . + . ID=GSCOCG00032748001;Name=Cc11_g09340 | |
| 64836 chr11 manual_curation mRNA 26756859 26763282 . + . ID=GSCOCT00032748001;Parent=GSCOCG00032748001;Name=Cc11_g09340 | |
| 64837 chr11 manual_curation polypeptide 26757318 26762782 . + . ID=GSCOCP00032748001;Dbxref=InterPro:IPR005123,InterPro:IPR006620,PFAM:PF03171,SMART:SM00702,SwissProt:A3KGZ2,SwissProt:Q28C22,SwissProt:Q3ED68,TAIR:AT1G22950.1,TAIR:AT1G48740.2,TAIR:AT3G18210.1,TrEMBL:B9SFV3,TrEMBL:B9SJY6,TrEMBL:D7T8Y0;Derives_from=GSCOCT00032748001;Name=Cc11_g09340;Ontology_term=CC_evidence_code:ISS,GO:0005506,GO:0016491,GO:0031418,GO:0055114,CC_EC_number:1.14.11.4,PRODUCT:Uncharacterized PKHD-type hydroxylase At1g22950,CC_functional_completeness:complete,CC_gene:At1g22950,CC_gene:ogfod2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032748001~ Uncharacterized PKHD-type hydroxylase At1g22950~ At1g22950~ complete;original_location=complement(join(4585103..4585348%2C4583851..4583898%2C4582353..4582529%2C4582107..4582257%2C4581927..4582013%2C4581090..4581214%2C4580381..4580499%2C4579994..4580105%2C4579884..4579919));owner=coffea | |
| 64838 chr11 manual_curation exon 26762747 26763282 . + . Parent=GSCOCT00032748001 | |
| 64839 chr11 manual_curation exon 26762561 26762672 . + . Parent=GSCOCT00032748001 | |
| 64840 chr11 manual_curation exon 26762167 26762285 . + . Parent=GSCOCT00032748001 | |
| 64841 chr11 manual_curation exon 26761452 26761576 . + . Parent=GSCOCT00032748001 | |
| 64842 chr11 manual_curation exon 26760653 26760739 . + . Parent=GSCOCT00032748001 | |
| 64843 chr11 manual_curation exon 26760409 26760559 . + . Parent=GSCOCT00032748001 | |
| 64844 chr11 manual_curation exon 26760137 26760313 . + . Parent=GSCOCT00032748001 | |
| 64845 chr11 manual_curation exon 26758768 26758815 . + . Parent=GSCOCT00032748001 | |
| 64846 chr11 manual_curation exon 26756859 26757563 . + . Parent=GSCOCT00032748001 | |
| 64847 chr11 manual_curation CDS 26762747 26762782 . + 0 Parent=GSCOCT00032748001 | |
| 64848 chr11 manual_curation CDS 26762561 26762672 . + 2 Parent=GSCOCT00032748001 | |
| 64849 chr11 manual_curation CDS 26762167 26762285 . + 0 Parent=GSCOCT00032748001 | |
| 64850 chr11 manual_curation CDS 26761452 26761576 . + 1 Parent=GSCOCT00032748001 | |
| 64851 chr11 manual_curation CDS 26760653 26760739 . + 1 Parent=GSCOCT00032748001 | |
| 64852 chr11 manual_curation CDS 26760409 26760559 . + 0 Parent=GSCOCT00032748001 | |
| 64853 chr11 manual_curation CDS 26760137 26760313 . + 0 Parent=GSCOCT00032748001 | |
| 64854 chr11 manual_curation CDS 26758768 26758815 . + 0 Parent=GSCOCT00032748001 | |
| 64855 chr11 manual_curation CDS 26757318 26757563 . + 0 Parent=GSCOCT00032748001 | |
| 64856 chr11 manual_curation gene 26765518 26771330 . + . ID=GSCOCG00032746001;Name=Cc11_g09350 | |
| 64857 chr11 manual_curation mRNA 26765518 26771330 . + . ID=GSCOCT00032746001;Parent=GSCOCG00032746001;Name=Cc11_g09350 | |
| 64858 chr11 manual_curation polypeptide 26765518 26771330 . + . ID=GSCOCP00032746001;Dbxref=GENE3D:G3DSA:3.30.70.590,InterPro:IPR002934,InterPro:IPR007010,InterPro:IPR007012,InterPro:IPR011068,InterPro:IPR014492,PFAM:PF01909,PFAM:PF04926,PFAM:PF04928,PIR:PIRSF018425,SUPERFAMILY:SSF55003,SwissProt:P51003,SwissProt:Q54J73,SwissProt:Q61183,TAIR:AT1G17980.1,TAIR:AT2G25850.2,TAIR:AT4G32850.8,TrEMBL:B9IE77,TrEMBL:B9SFV5,TrEMBL:F6HFL7;Derives_from=GSCOCT00032746001;Name=Cc11_g09350;Ontology_term=CC_evidence_code:ISS,GO:0003723,GO:0004652,GO:0005634,GO:0006350,GO:0016779,GO:0031123,GO:0043631,CC_EC_number:2.7.7.19,CC_EC_number:2.7.7.19,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:papA,CC_gene:Papola,CC_gene:PAPOLA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032746001~ Putative uncharacterized protein~ papA~ complete;original_location=complement(join(4577041..4577148%2C4576234..4576311%2C4576043..4576150%2C4575027..4575089%2C4574750..4574911%2C4574027..4574140%2C4573882..4573944%2C4573454..4573777%2C4572272..4572436%2C4571336..4572184));owner=coffea | |
| 64859 chr11 manual_curation exon 26770482 26771330 . + . Parent=GSCOCT00032746001 | |
| 64860 chr11 manual_curation exon 26770230 26770394 . + . Parent=GSCOCT00032746001 | |
| 64861 chr11 manual_curation exon 26768889 26769212 . + . Parent=GSCOCT00032746001 | |
| 64862 chr11 manual_curation exon 26768722 26768784 . + . Parent=GSCOCT00032746001 | |
| 64863 chr11 manual_curation exon 26768526 26768639 . + . Parent=GSCOCT00032746001 | |
| 64864 chr11 manual_curation exon 26767755 26767916 . + . Parent=GSCOCT00032746001 | |
| 64865 chr11 manual_curation exon 26767577 26767639 . + . Parent=GSCOCT00032746001 | |
| 64866 chr11 manual_curation exon 26766516 26766623 . + . Parent=GSCOCT00032746001 | |
| 64867 chr11 manual_curation exon 26766355 26766432 . + . Parent=GSCOCT00032746001 | |
| 64868 chr11 manual_curation exon 26765518 26765625 . + . Parent=GSCOCT00032746001 | |
| 64869 chr11 manual_curation CDS 26770482 26771330 . + 0 Parent=GSCOCT00032746001 | |
| 64870 chr11 manual_curation CDS 26770230 26770394 . + 0 Parent=GSCOCT00032746001 | |
| 64871 chr11 manual_curation CDS 26768889 26769212 . + 0 Parent=GSCOCT00032746001 | |
| 64872 chr11 manual_curation CDS 26768722 26768784 . + 0 Parent=GSCOCT00032746001 | |
| 64873 chr11 manual_curation CDS 26768526 26768639 . + 0 Parent=GSCOCT00032746001 | |
| 64874 chr11 manual_curation CDS 26767755 26767916 . + 0 Parent=GSCOCT00032746001 | |
| 64875 chr11 manual_curation CDS 26767577 26767639 . + 0 Parent=GSCOCT00032746001 | |
| 64876 chr11 manual_curation CDS 26766516 26766623 . + 0 Parent=GSCOCT00032746001 | |
| 64877 chr11 manual_curation CDS 26766355 26766432 . + 0 Parent=GSCOCT00032746001 | |
| 64878 chr11 manual_curation CDS 26765518 26765625 . + 0 Parent=GSCOCT00032746001 | |
| 64879 chr11 manual_curation gene 26781109 26781630 . + . ID=GSCOCG00032744001;Name=Cc11_g09360 | |
| 64880 chr11 manual_curation mRNA 26781109 26781630 . + . ID=GSCOCT00032744001;Parent=GSCOCG00032744001;Name=Cc11_g09360 | |
| 64881 chr11 manual_curation polypeptide 26781109 26781630 . + . ID=GSCOCP00032744001;Dbxref=InterPro:IPR001841,InterPro:IPR018957,PFAM:PF00097,PROFILE:PS50089,SMART:SM00184,SwissProt:Q9ZT50,SwissProt:Q9ZU51,TAIR:AT1G15100.1,TAIR:AT2G01150.1,TAIR:AT5G41400.1,TrEMBL:B9HJ71,TrEMBL:B9HWB4,TrEMBL:G8A269;Derives_from=GSCOCT00032744001;Name=Cc11_g09360;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative E3 ubiquitin-protein ligase RHA2A,CC_functional_completeness:complete,CC_gene:RHA2A,CC_gene:RHA2B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032744001~ Putative E3 ubiquitin-protein ligase RHA2A~ RHA2A~ complete;original_location=complement(4561036..4561557);owner=coffea | |
| 64882 chr11 manual_curation exon 26781109 26781630 . + . Parent=GSCOCT00032744001 | |
| 64883 chr11 manual_curation CDS 26781109 26781630 . + 0 Parent=GSCOCT00032744001 | |
| 64884 chr11 manual_curation gene 26786345 26789938 . + . ID=GSCOCG00032743001;Name=Cc11_g09370 | |
| 64885 chr11 manual_curation mRNA 26786345 26789938 . + . ID=GSCOCT00032743001;Parent=GSCOCG00032743001;Name=Cc11_g09370 | |
| 64886 chr11 manual_curation polypeptide 26786345 26789938 . + . ID=GSCOCP00032743001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR001223,InterPro:IPR001579,InterPro:IPR013781,InterPro:IPR017853,PFAM:PF00704,PROSITE:PS01095,SUPERFAMILY:SSF51445,SwissProt:P23472,SwissProt:P29060,SwissProt:P51614,TAIR:AT5G24090.1,TrEMBL:B9RDZ5,TrEMBL:F6I677,TrEMBL:Q19AL0;Derives_from=GSCOCT00032743001;Name=Cc11_g09370;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0043169,CC_EC_number:3.2.1.17,PRODUCT:Acidic endochitinase,CC_functional_completeness:modules,CC_gene:CHIT3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032743001~ Acidic endochitinase~ CHIT3~ modules;original_location=complement(join(4555633..4556321%2C4555428..4555563%2C4554805..4554879%2C4554300..4554400%2C4553330..4553441%2C4552728..4553102));owner=coffea | |
| 64887 chr11 manual_curation exon 26789564 26789938 . + . Parent=GSCOCT00032743001 | |
| 64888 chr11 manual_curation exon 26789225 26789336 . + . Parent=GSCOCT00032743001 | |
| 64889 chr11 manual_curation exon 26788266 26788366 . + . Parent=GSCOCT00032743001 | |
| 64890 chr11 manual_curation exon 26787787 26787861 . + . Parent=GSCOCT00032743001 | |
| 64891 chr11 manual_curation exon 26787103 26787238 . + . Parent=GSCOCT00032743001 | |
| 64892 chr11 manual_curation exon 26786345 26787033 . + . Parent=GSCOCT00032743001 | |
| 64893 chr11 manual_curation CDS 26789564 26789938 . + 0 Parent=GSCOCT00032743001 | |
| 64894 chr11 manual_curation CDS 26789225 26789336 . + 2 Parent=GSCOCT00032743001 | |
| 64895 chr11 manual_curation CDS 26788266 26788366 . + 0 Parent=GSCOCT00032743001 | |
| 64896 chr11 manual_curation CDS 26787787 26787861 . + 0 Parent=GSCOCT00032743001 | |
| 64897 chr11 manual_curation CDS 26787103 26787238 . + 2 Parent=GSCOCT00032743001 | |
| 64898 chr11 manual_curation CDS 26786345 26787033 . + 0 Parent=GSCOCT00032743001 | |
| 64899 chr11 manual_curation gene 26826217 26826926 . + . ID=GSCOCG00032735001;Name=Cc11_g09380 | |
| 64900 chr11 manual_curation mRNA 26826217 26826926 . + . ID=GSCOCT00032735001;Parent=GSCOCG00032735001;Name=Cc11_g09380 | |
| 64901 chr11 manual_curation polypeptide 26826217 26826748 . + . ID=GSCOCP00032735001;Dbxref=TrEMBL:G8E840,TrEMBL:G8E841,TrEMBL:G8E842;Derives_from=GSCOCT00032735001;Name=Cc11_g09380;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein Rx4,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032735001~ Putative uncharacterized protein Rx4~ unknown_gene~ fragment;original_location=complement(join(4516118..4516449%2C4515918..4515936));owner=coffea | |
| 64902 chr11 manual_curation exon 26826730 26826926 . + . Parent=GSCOCT00032735001 | |
| 64903 chr11 manual_curation exon 26826217 26826548 . + . Parent=GSCOCT00032735001 | |
| 64904 chr11 manual_curation CDS 26826730 26826748 . + 2 Parent=GSCOCT00032735001 | |
| 64905 chr11 manual_curation CDS 26826217 26826548 . + 0 Parent=GSCOCT00032735001 | |
| 64906 chr11 manual_curation gene 26828505 26830067 . + . ID=GSCOCG00032734001;Name=Cc11_g09390 | |
| 64907 chr11 manual_curation mRNA 26828505 26830067 . + . ID=GSCOCT00032734001;Parent=GSCOCG00032734001;Name=Cc11_g09390 | |
| 64908 chr11 manual_curation polypeptide 26828850 26830067 . + . ID=GSCOCP00032734001;Dbxref=InterPro:IPR002182,PFAM:PF00931,SwissProt:Q8W474,SwissProt:Q9C646,SwissProt:Q9STE7,TAIR:AT1G58390.1,TAIR:AT1G58410.1,TAIR:AT3G46730.1,TrEMBL:G8E840,TrEMBL:G8E841,TrEMBL:G8E842;Derives_from=GSCOCT00032734001;Name=Cc11_g09390;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:RXW24L,CC_gene:At1g58390,CC_gene:RPP13L3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032734001~ Hypothetical protein~ RXW24L~ missing_functional_completeness;original_location=complement(4512599..4513816);owner=coffea | |
| 64909 chr11 manual_curation exon 26828505 26828575 . + . Parent=GSCOCT00032734001 | |
| 64910 chr11 manual_curation exon 26828843 26830067 . + . Parent=GSCOCT00032734001 | |
| 64911 chr11 manual_curation CDS 26828850 26830067 . + 0 Parent=GSCOCT00032734001 | |
| 64912 chr11 manual_curation gene 26836657 26838009 . + . ID=GSCOCG00032733001;Name=Cc11_g09400 | |
| 64913 chr11 manual_curation mRNA 26836657 26838009 . + . ID=GSCOCT00032733001;Parent=GSCOCG00032733001;Name=Cc11_g09400 | |
| 64914 chr11 manual_curation polypeptide 26836657 26838009 . + . ID=GSCOCP00032733001;Dbxref=InterPro:IPR002182,PFAM:PF00931,SwissProt:Q6L3Z7,SwissProt:Q6L400,SwissProt:Q6L403,TAIR:AT1G50180.1,TAIR:AT3G46530.1,TAIR:AT3G46710.1,TrEMBL:G8E840,TrEMBL:G8E841,TrEMBL:G8E842;Derives_from=GSCOCT00032733001;Name=Cc11_g09400;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1B-16,CC_functional_completeness:fragment,CC_gene:R1B-16,CC_gene:R1B-17,CC_gene:R1B-14;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032733001~ Putative late blight resistance protein homolog R1B-16~ R1B-16~ fragment;original_location=complement(4504657..4506009);owner=coffea | |
| 64915 chr11 manual_curation exon 26836657 26838009 . + . Parent=GSCOCT00032733001 | |
| 64916 chr11 manual_curation CDS 26836657 26838009 . + 0 Parent=GSCOCT00032733001 | |
| 64917 chr11 manual_curation gene 26838159 26838908 . + . ID=GSCOCG00032732001;Name=Cc11_g09410 | |
| 64918 chr11 manual_curation mRNA 26838159 26838908 . + . ID=GSCOCT00032732001;Parent=GSCOCG00032732001;Name=Cc11_g09410 | |
| 64919 chr11 manual_curation polypeptide 26838159 26838908 . + . ID=GSCOCP00032732001;Dbxref=TrEMBL:G8E840,TrEMBL:G8E841,TrEMBL:G8E842;Derives_from=GSCOCT00032732001;Name=Cc11_g09410;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032732001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(4504158..4504507%2C4503758..4503926));owner=coffea | |
| 64920 chr11 manual_curation exon 26838740 26838908 . + . Parent=GSCOCT00032732001 | |
| 64921 chr11 manual_curation exon 26838159 26838508 . + . Parent=GSCOCT00032732001 | |
| 64922 chr11 manual_curation CDS 26838740 26838908 . + 2 Parent=GSCOCT00032732001 | |
| 64923 chr11 manual_curation CDS 26838159 26838508 . + 0 Parent=GSCOCT00032732001 | |
| 64924 chr11 manual_curation gene 26869029 26872394 . + . ID=GSCOCG00032727001;Name=Cc11_g09420 | |
| 64925 chr11 manual_curation mRNA 26869029 26872394 . + . ID=GSCOCT00032727001;Parent=GSCOCG00032727001;Name=Cc11_g09420 | |
| 64926 chr11 manual_curation polypeptide 26869029 26872394 . + . ID=GSCOCP00032727001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q60CZ8,SwissProt:Q6L403,SwissProt:Q6L438,TAIR:AT1G59218.1,TAIR:AT3G46530.1,TAIR:AT3G46730.1,TrEMBL:G8E840,TrEMBL:G8E841,TrEMBL:G8E842;Derives_from=GSCOCT00032727001;Name=Cc11_g09420;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative Disease resistance protein (CC-NBS-LRR class) family,CC_functional_completeness:modules,CC_gene:R1A-6,CC_gene:R1A-10,CC_gene:R1B-17;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032727001~ Putative Disease resistance protein (CC-NBS-LRR class) family~ R1A-6~ modules;original_location=complement(4470272..4473637);owner=coffea | |
| 64927 chr11 manual_curation exon 26869029 26872394 . + . Parent=GSCOCT00032727001 | |
| 64928 chr11 manual_curation CDS 26869029 26872394 . + 0 Parent=GSCOCT00032727001 | |
| 64929 chr11 manual_curation gene 26876796 26879817 . + . ID=GSCOCG00032726001;Name=Cc11_g09430 | |
| 64930 chr11 manual_curation mRNA 26876796 26879817 . + . ID=GSCOCT00032726001;Parent=GSCOCG00032726001;Name=Cc11_g09430 | |
| 64931 chr11 manual_curation polypeptide 26876796 26879445 . + . ID=GSCOCP00032726001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q60CZ8,SwissProt:Q6L3Z7,SwissProt:Q6L438,TAIR:AT3G46530.1,TAIR:AT3G46730.1,TAIR:AT5G35450.1,TrEMBL:G8E840,TrEMBL:G8E841,TrEMBL:G8E842;Derives_from=GSCOCT00032726001;Name=Cc11_g09430;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1A-6,CC_functional_completeness:fragment,CC_gene:R1A-6,CC_gene:R1A-10,CC_gene:R1B-14;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032726001~ Putative late blight resistance protein homolog R1A-6~ R1A-6~ fragment;original_location=complement(join(4463808..4465870%2C4463221..4463239));owner=coffea | |
| 64932 chr11 manual_curation exon 26879427 26879817 . + . Parent=GSCOCT00032726001 | |
| 64933 chr11 manual_curation exon 26876796 26878858 . + . Parent=GSCOCT00032726001 | |
| 64934 chr11 manual_curation CDS 26879427 26879445 . + 2 Parent=GSCOCT00032726001 | |
| 64935 chr11 manual_curation CDS 26876796 26878858 . + 0 Parent=GSCOCT00032726001 | |
| 64936 chr11 manual_curation gene 26888546 26892672 . + . ID=GSCOCG00032725001;Name=Cc11_g09440 | |
| 64937 chr11 manual_curation mRNA 26888546 26892672 . + . ID=GSCOCT00032725001;Parent=GSCOCG00032725001;Name=Cc11_g09440 | |
| 64938 chr11 manual_curation polypeptide 26889742 26892379 . + . ID=GSCOCP00032725001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q60CZ8,SwissProt:Q6L438,SwissProt:Q9M667,TAIR:AT1G50180.1,TAIR:AT3G46530.1,TAIR:AT3G46730.1,TrEMBL:G8E840,TrEMBL:G8E841,TrEMBL:G8E842;Derives_from=GSCOCT00032725001;Name=Cc11_g09440;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1A-6,CC_functional_completeness:fragment,CC_gene:RPP13,CC_gene:R1A-6,CC_gene:R1A-10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032725001~ Putative late blight resistance protein homolog R1A-6~ RPP13~ fragment;original_location=complement(join(4452216..4452924%2C4450682..4451618%2C4450287..4450455));owner=coffea | |
| 64939 chr11 manual_curation exon 26892211 26892672 . + . Parent=GSCOCT00032725001 | |
| 64940 chr11 manual_curation exon 26891048 26891984 . + . Parent=GSCOCT00032725001 | |
| 64941 chr11 manual_curation exon 26888546 26890450 . + . Parent=GSCOCT00032725001 | |
| 64942 chr11 manual_curation CDS 26892211 26892379 . + 2 Parent=GSCOCT00032725001 | |
| 64943 chr11 manual_curation CDS 26891048 26891984 . + 1 Parent=GSCOCT00032725001 | |
| 64944 chr11 manual_curation CDS 26889742 26890450 . + 0 Parent=GSCOCT00032725001 | |
| 64945 chr11 manual_curation gene 26898454 26900084 . + . ID=GSCOCG00032723001;Name=Cc11_g09450 | |
| 64946 chr11 manual_curation mRNA 26898454 26900084 . + . ID=GSCOCT00032723001;Parent=GSCOCG00032723001;Name=Cc11_g09450 | |
| 64947 chr11 manual_curation polypeptide 26898508 26900084 . + . ID=GSCOCP00032723001;Derives_from=GSCOCT00032723001;Name=Cc11_g09450;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032723001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(4444122..4444158%2C4442582..4443951));owner=coffea | |
| 64948 chr11 manual_curation exon 26898715 26900084 . + . Parent=GSCOCT00032723001 | |
| 64949 chr11 manual_curation exon 26898454 26898544 . + . Parent=GSCOCT00032723001 | |
| 64950 chr11 manual_curation CDS 26898715 26900084 . + 1 Parent=GSCOCT00032723001 | |
| 64951 chr11 manual_curation CDS 26898508 26898544 . + 0 Parent=GSCOCT00032723001 | |
| 64952 chr11 manual_curation gene 26924526 26926651 . + . ID=GSCOCG00032721001;Name=Cc11_g09460 | |
| 64953 chr11 manual_curation mRNA 26924526 26926651 . + . ID=GSCOCT00032721001;Parent=GSCOCG00032721001;Name=Cc11_g09460 | |
| 64954 chr11 manual_curation polypeptide 26924879 26926651 . + . ID=GSCOCP00032721001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q60CZ8,SwissProt:Q6L3Z4,SwissProt:Q6L438,TAIR:AT1G50180.1,TAIR:AT3G46530.1,TAIR:AT3G46730.1,TrEMBL:G8E840,TrEMBL:G8E841,TrEMBL:G8E842;Derives_from=GSCOCT00032721001;Name=Cc11_g09460;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:R1B-12,CC_gene:R1A-6,CC_gene:R1A-10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032721001~ Hypothetical protein~ R1B-12~ missing_functional_completeness;original_location=complement(4416015..4417787);owner=coffea | |
| 64955 chr11 manual_curation exon 26924526 26924604 . + . Parent=GSCOCT00032721001 | |
| 64956 chr11 manual_curation exon 26924872 26926651 . + . Parent=GSCOCT00032721001 | |
| 64957 chr11 manual_curation CDS 26924879 26926651 . + 0 Parent=GSCOCT00032721001 | |
| 64958 chr11 manual_curation gene 26926823 26928669 . + . ID=GSCOCG00032720001;Name=Cc11_g09470 | |
| 64959 chr11 manual_curation mRNA 26926823 26928669 . + . ID=GSCOCT00032720001;Parent=GSCOCG00032720001;Name=Cc11_g09470 | |
| 64960 chr11 manual_curation polypeptide 26926823 26928201 . + . ID=GSCOCP00032720001;Dbxref=SwissProt:Q60CZ8,SwissProt:Q6L3Z4,SwissProt:Q6L438,TAIR:AT5G35450.1,TrEMBL:G8E840,TrEMBL:G8E841,TrEMBL:G8E842;Derives_from=GSCOCT00032720001;Name=Cc11_g09470;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1B-12,CC_functional_completeness:fragment,CC_gene:R1B-12,CC_gene:R1A-6,CC_gene:R1A-10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032720001~ Putative late blight resistance protein homolog R1B-12~ R1B-12~ fragment;original_location=complement(join(4414702..4415843%2C4414465..4414483));owner=coffea | |
| 64961 chr11 manual_curation exon 26928183 26928669 . + . Parent=GSCOCT00032720001 | |
| 64962 chr11 manual_curation exon 26926823 26927964 . + . Parent=GSCOCT00032720001 | |
| 64963 chr11 manual_curation CDS 26928183 26928201 . + 2 Parent=GSCOCT00032720001 | |
| 64964 chr11 manual_curation CDS 26926823 26927964 . + 0 Parent=GSCOCT00032720001 | |
| 64965 chr11 manual_curation gene 26932339 26934943 . + . ID=GSCOCG00032718001;Name=Cc11_g09480 | |
| 64966 chr11 manual_curation mRNA 26932339 26934943 . + . ID=GSCOCT00032718001;Parent=GSCOCG00032718001;Name=Cc11_g09480 | |
| 64967 chr11 manual_curation polypeptide 26932515 26933954 . + . ID=GSCOCP00032718001;Derives_from=GSCOCT00032718001;Name=Cc11_g09480;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032718001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(4410115..4410151%2C4408777..4409948%2C4408712..4408729));owner=coffea | |
| 64968 chr11 manual_curation exon 26933937 26934943 . + . Parent=GSCOCT00032718001 | |
| 64969 chr11 manual_curation exon 26932718 26933889 . + . Parent=GSCOCT00032718001 | |
| 64970 chr11 manual_curation exon 26932339 26932551 . + . Parent=GSCOCT00032718001 | |
| 64971 chr11 manual_curation CDS 26933937 26933954 . + 0 Parent=GSCOCT00032718001 | |
| 64972 chr11 manual_curation CDS 26932718 26933889 . + 1 Parent=GSCOCT00032718001 | |
| 64973 chr11 manual_curation CDS 26932515 26932551 . + 0 Parent=GSCOCT00032718001 | |
| 64974 chr11 manual_curation gene 26939589 26940190 . + . ID=GSCOCG00032717001;Name=Cc11_g09490 | |
| 64975 chr11 manual_curation mRNA 26939589 26940190 . + . ID=GSCOCT00032717001;Parent=GSCOCG00032717001;Name=Cc11_g09490 | |
| 64976 chr11 manual_curation polypeptide 26939686 26940190 . + . ID=GSCOCP00032717001;Derives_from=GSCOCT00032717001;Name=Cc11_g09490;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032717001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(4402944..4402980%2C4402476..4402747));owner=coffea | |
| 64977 chr11 manual_curation exon 26939919 26940190 . + . Parent=GSCOCT00032717001 | |
| 64978 chr11 manual_curation exon 26939589 26939722 . + . Parent=GSCOCT00032717001 | |
| 64979 chr11 manual_curation CDS 26939919 26940190 . + 1 Parent=GSCOCT00032717001 | |
| 64980 chr11 manual_curation CDS 26939686 26939722 . + 0 Parent=GSCOCT00032717001 | |
| 64981 chr11 manual_curation gene 26961103 26961668 . + . ID=GSCOCG00032712001;Name=Cc11_g09500 | |
| 64982 chr11 manual_curation mRNA 26961103 26961668 . + . ID=GSCOCT00032712001;Parent=GSCOCG00032712001;Name=Cc11_g09500 | |
| 64983 chr11 manual_curation polypeptide 26961103 26961541 . + . ID=GSCOCP00032712001;Derives_from=GSCOCT00032712001;Name=Cc11_g09500;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032712001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(4381343..4381563%2C4381125..4381155));owner=coffea | |
| 64984 chr11 manual_curation exon 26961511 26961668 . + . Parent=GSCOCT00032712001 | |
| 64985 chr11 manual_curation exon 26961103 26961323 . + . Parent=GSCOCT00032712001 | |
| 64986 chr11 manual_curation CDS 26961511 26961541 . + 2 Parent=GSCOCT00032712001 | |
| 64987 chr11 manual_curation CDS 26961103 26961323 . + 0 Parent=GSCOCT00032712001 | |
| 64988 chr11 manual_curation gene 26962447 26962944 . + . ID=GSCOCG00032711001;Name=Cc11_g09510 | |
| 64989 chr11 manual_curation mRNA 26962447 26962944 . + . ID=GSCOCT00032711001;Parent=GSCOCG00032711001;Name=Cc11_g09510 | |
| 64990 chr11 manual_curation polypeptide 26962447 26962944 . + . ID=GSCOCP00032711001;Derives_from=GSCOCT00032711001;Name=Cc11_g09510;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032711001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(4380023..4380219%2C4379722..4379992));owner=coffea | |
| 64991 chr11 manual_curation exon 26962674 26962944 . + . Parent=GSCOCT00032711001 | |
| 64992 chr11 manual_curation exon 26962447 26962643 . + . Parent=GSCOCT00032711001 | |
| 64993 chr11 manual_curation CDS 26962674 26962944 . + 2 Parent=GSCOCT00032711001 | |
| 64994 chr11 manual_curation CDS 26962447 26962643 . + 0 Parent=GSCOCT00032711001 | |
| 64995 chr11 manual_curation gene 26965821 26968328 . - . ID=GSCOCG00032709001;Name=Cc11_g09520 | |
| 64996 chr11 manual_curation mRNA 26965821 26968328 . - . ID=GSCOCT00032709001;Parent=GSCOCG00032709001;Name=Cc11_g09520 | |
| 64997 chr11 manual_curation polypeptide 26966834 26967241 . - . ID=GSCOCP00032709001;Derives_from=GSCOCT00032709001;Name=Cc11_g09520;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032709001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(4375425..4375653%2C4375795..4375832);owner=coffea | |
| 64998 chr11 manual_curation exon 26967013 26968328 . - . Parent=GSCOCT00032709001 | |
| 64999 chr11 manual_curation exon 26965821 26966871 . - . Parent=GSCOCT00032709001 | |
| 65000 chr11 manual_curation CDS 26967013 26967241 . - 0 Parent=GSCOCT00032709001 | |
| 65001 chr11 manual_curation CDS 26966834 26966871 . - 1 Parent=GSCOCT00032709001 | |
| 65002 chr11 manual_curation gene 26975438 26977343 . - . ID=GSCOCG00032706001;Name=Cc11_g09530 | |
| 65003 chr11 manual_curation mRNA 26975438 26977343 . - . ID=GSCOCT00032706001;Parent=GSCOCG00032706001;Name=Cc11_g09530 | |
| 65004 chr11 manual_curation polypeptide 26975760 26977343 . - . ID=GSCOCP00032706001;Dbxref=InterPro:IPR000571,PFAM:PF00642,PROFILE:PS50103,SMART:SM00356,SwissProt:Q6L5G1,SwissProt:Q9C9F5,SwissProt:Q9C9N3,TAIR:AT1G66810.1,TAIR:AT1G68200.1,TrEMBL:B9SJY0,TrEMBL:D7T8Y6,TrEMBL:I1LER6;Derives_from=GSCOCT00032706001;Name=Cc11_g09530;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative Zinc finger CCCH domain-containing protein 15,CC_functional_completeness:modules,CC_gene:At1g68200,CC_gene:Os05g0576300,CC_gene:At1g66810;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032706001~ Putative Zinc finger CCCH domain-containing protein 15~ At1g68200~ modules;original_location=join(4365323..4366024%2C4366577..4366906);owner=coffea | |
| 65005 chr11 manual_curation exon 26976642 26977343 . - . Parent=GSCOCT00032706001 | |
| 65006 chr11 manual_curation exon 26975438 26976089 . - . Parent=GSCOCT00032706001 | |
| 65007 chr11 manual_curation CDS 26976642 26977343 . - 0 Parent=GSCOCT00032706001 | |
| 65008 chr11 manual_curation CDS 26975760 26976089 . - 0 Parent=GSCOCT00032706001 | |
| 65009 chr11 manual_curation gene 26980588 26986420 . - . ID=GSCOCG00032705001;Name=Cc11_g09540 | |
| 65010 chr11 manual_curation mRNA 26980588 26986420 . - . ID=GSCOCT00032705001;Parent=GSCOCG00032705001;Name=Cc11_g09540 | |
| 65011 chr11 manual_curation polypeptide 26980890 26985554 . - . ID=GSCOCP00032705001;Dbxref=InterPro:IPR000315,InterPro:IPR010402,PFAM:PF06203,PROFILE:PS50119,PROFILE:PS51017,SMART:SM00336,SwissProt:Q9C9F4,SwissProt:Q9LUA9,SwissProt:Q9SSE5,TAIR:AT1G68190.1,TAIR:AT3G07650.1,TAIR:AT5G48250.1,TrEMBL:B9HJ67,TrEMBL:D7T8Y8,TrEMBL:I1NFQ8;Derives_from=GSCOCT00032705001;Name=Cc11_g09540;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative B-box type zinc finger protein with CCT domain,CC_functional_completeness:modules,CC_gene:At1g68190,CC_gene:COL10,CC_gene:COL9;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032705001~ Putative B-box type zinc finger protein with CCT domain~ At1g68190~ modules;original_location=join(4357112..4357630%2C4358960..4359277%2C4360252..4360479%2C4361284..4361570%2C4361650..4361776);owner=coffea | |
| 65012 chr11 manual_curation exon 26985036 26986420 . - . Parent=GSCOCT00032705001 | |
| 65013 chr11 manual_curation exon 26983389 26983706 . - . Parent=GSCOCT00032705001 | |
| 65014 chr11 manual_curation exon 26982187 26982414 . - . Parent=GSCOCT00032705001 | |
| 65015 chr11 manual_curation exon 26981096 26981382 . - . Parent=GSCOCT00032705001 | |
| 65016 chr11 manual_curation exon 26980588 26981016 . - . Parent=GSCOCT00032705001 | |
| 65017 chr11 manual_curation CDS 26985036 26985554 . - 0 Parent=GSCOCT00032705001 | |
| 65018 chr11 manual_curation CDS 26983389 26983706 . - 0 Parent=GSCOCT00032705001 | |
| 65019 chr11 manual_curation CDS 26982187 26982414 . - 0 Parent=GSCOCT00032705001 | |
| 65020 chr11 manual_curation CDS 26981096 26981382 . - 0 Parent=GSCOCT00032705001 | |
| 65021 chr11 manual_curation CDS 26980890 26981016 . - 2 Parent=GSCOCT00032705001 | |
| 65022 chr11 manual_curation gene 26999985 27003409 . - . ID=GSCOCG00032703001;Name=Cc11_g09550 | |
| 65023 chr11 manual_curation mRNA 26999985 27003409 . - . ID=GSCOCT00032703001;Parent=GSCOCG00032703001;Name=Cc11_g09550 | |
| 65024 chr11 manual_curation polypeptide 27001059 27003116 . - . ID=GSCOCP00032703001;Dbxref=InterPro:IPR008162,InterPro:IPR022617,PFAM:PF11976,PROSITE:PS00387,TAIR:AT1G68185.1,TrEMBL:B9SJX6,TrEMBL:F6HEU4,TrEMBL:I1LER8;Derives_from=GSCOCT00032703001;Name=Cc11_g09550;Ontology_term=CC_evidence_code:ISS,GO:0000287,GO:0004427,GO:0005737,GO:0006796,CC_EC_number:missing_EC_number,PRODUCT:Ubiquitin-like superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032703001~ Ubiquitin-like superfamily protein~ unknown_gene~ complete;original_location=join(4339550..4339616%2C4339707..4339768%2C4339893..4340047%2C4340513..4340753%2C4341440..4341607);owner=coffea | |
| 65025 chr11 manual_curation exon 27003219 27003409 . - . Parent=GSCOCT00032703001 | |
| 65026 chr11 manual_curation exon 26999985 27000209 . - . Parent=GSCOCT00032703001 | |
| 65027 chr11 manual_curation exon 27003050 27003125 . - . Parent=GSCOCT00032703001 | |
| 65028 chr11 manual_curation exon 27002898 27002959 . - . Parent=GSCOCT00032703001 | |
| 65029 chr11 manual_curation exon 27002619 27002773 . - . Parent=GSCOCT00032703001 | |
| 65030 chr11 manual_curation exon 27001913 27002153 . - . Parent=GSCOCT00032703001 | |
| 65031 chr11 manual_curation exon 27001054 27001226 . - . Parent=GSCOCT00032703001 | |
| 65032 chr11 manual_curation CDS 27003050 27003116 . - 0 Parent=GSCOCT00032703001 | |
| 65033 chr11 manual_curation CDS 27002898 27002959 . - 1 Parent=GSCOCT00032703001 | |
| 65034 chr11 manual_curation CDS 27002619 27002773 . - 0 Parent=GSCOCT00032703001 | |
| 65035 chr11 manual_curation CDS 27001913 27002153 . - 2 Parent=GSCOCT00032703001 | |
| 65036 chr11 manual_curation CDS 27001059 27001226 . - 0 Parent=GSCOCT00032703001 | |
| 65037 chr11 manual_curation gene 27012696 27016858 . - . ID=GSCOCG00032702001;Name=Cc11_g09560 | |
| 65038 chr11 manual_curation mRNA 27012696 27016858 . - . ID=GSCOCT00032702001;Parent=GSCOCG00032702001;Name=Cc11_g09560 | |
| 65039 chr11 manual_curation polypeptide 27012989 27016595 . - . ID=GSCOCP00032702001;Dbxref=InterPro:IPR002293,InterPro:IPR004756,InterPro:IPR004840,InterPro:IPR004841,PANTHER:PTHR11785,PFAM:PF00324,PIR:PIRSF006060,PROSITE:PS00218,SwissProt:O60113,SwissProt:O74537,SwissProt:Q09887,TAIR:AT2G01170.1,TIGRFAMs:TIGR00907,TrEMBL:B9SJX4,TrEMBL:D7T8Z1,TrEMBL:I1LES0;Derives_from=GSCOCT00032702001;Name=Cc11_g09560;Ontology_term=CC_evidence_code:ISS,GO:0006810,GO:0006865,GO:0015171,GO:0016020,GO:0016021,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized amino-acid permease C15C4.04c,CC_functional_completeness:complete,CC_gene:SPBC15C4.04c,CC_gene:SPCC74.04,CC_gene:SPCC584.13;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032702001~ Putative Uncharacterized amino-acid permease C15C4.04c~ SPBC15C4.04c~ complete;original_location=join(4326071..4326207%2C4326327..4326587%2C4327436..4327454%2C4327569..4327788%2C4327905..4328086%2C4328559..4328848%2C4328934..4329063%2C4329330..4329677);owner=coffea | |
| 65040 chr11 manual_curation exon 27016459 27016858 . - . Parent=GSCOCT00032702001 | |
| 65041 chr11 manual_curation exon 27016079 27016339 . - . Parent=GSCOCT00032702001 | |
| 65042 chr11 manual_curation exon 27015212 27015230 . - . Parent=GSCOCT00032702001 | |
| 65043 chr11 manual_curation exon 27014878 27015097 . - . Parent=GSCOCT00032702001 | |
| 65044 chr11 manual_curation exon 27014580 27014761 . - . Parent=GSCOCT00032702001 | |
| 65045 chr11 manual_curation exon 27013818 27014107 . - . Parent=GSCOCT00032702001 | |
| 65046 chr11 manual_curation exon 27013603 27013732 . - . Parent=GSCOCT00032702001 | |
| 65047 chr11 manual_curation exon 27012696 27013336 . - . Parent=GSCOCT00032702001 | |
| 65048 chr11 manual_curation CDS 27016459 27016595 . - 0 Parent=GSCOCT00032702001 | |
| 65049 chr11 manual_curation CDS 27016079 27016339 . - 2 Parent=GSCOCT00032702001 | |
| 65050 chr11 manual_curation CDS 27015212 27015230 . - 2 Parent=GSCOCT00032702001 | |
| 65051 chr11 manual_curation CDS 27014878 27015097 . - 0 Parent=GSCOCT00032702001 | |
| 65052 chr11 manual_curation CDS 27014580 27014761 . - 1 Parent=GSCOCT00032702001 | |
| 65053 chr11 manual_curation CDS 27013818 27014107 . - 0 Parent=GSCOCT00032702001 | |
| 65054 chr11 manual_curation CDS 27013603 27013732 . - 2 Parent=GSCOCT00032702001 | |
| 65055 chr11 manual_curation CDS 27012989 27013336 . - 0 Parent=GSCOCT00032702001 | |
| 65056 chr11 manual_curation gene 27020167 27021492 . - . ID=GSCOCG00032700001;Name=Cc11_g09570 | |
| 65057 chr11 manual_curation mRNA 27020167 27021492 . - . ID=GSCOCT00032700001;Parent=GSCOCG00032700001;Name=Cc11_g09570 | |
| 65058 chr11 manual_curation polypeptide 27020167 27021492 . - . ID=GSCOCP00032700001;Dbxref=InterPro:IPR002293,InterPro:IPR004840,InterPro:IPR004841,PANTHER:PTHR11785,PFAM:PF00324,PROSITE:PS00218,SwissProt:O74537,SwissProt:Q09887,SwissProt:Q9US40,TAIR:AT2G01170.1,TrEMBL:B9HJ65,TrEMBL:B9SJX3,TrEMBL:D7T8Z2;Derives_from=GSCOCT00032700001;Name=Cc11_g09570;Ontology_term=CC_evidence_code:ISS,GO:0006810,GO:0006865,GO:0015171,GO:0016020,GO:0016021,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:SPCC74.04,CC_gene:SPCC584.13,CC_gene:SPAC1039.01;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032700001~ Putative uncharacterized protein~ SPCC74.04~ complete;original_location=join(4321174..4321340%2C4322172..4322499);owner=coffea | |
| 65059 chr11 manual_curation exon 27021326 27021492 . - . Parent=GSCOCT00032700001 | |
| 65060 chr11 manual_curation exon 27020167 27020494 . - . Parent=GSCOCT00032700001 | |
| 65061 chr11 manual_curation CDS 27021326 27021492 . - 0 Parent=GSCOCT00032700001 | |
| 65062 chr11 manual_curation CDS 27020167 27020494 . - 2 Parent=GSCOCT00032700001 | |
| 65063 chr11 manual_curation gene 27029781 27030209 . - . ID=GSCOCG00032699001;Name=Cc11_g09580 | |
| 65064 chr11 manual_curation mRNA 27029781 27030209 . - . ID=GSCOCT00032699001;Parent=GSCOCG00032699001;Name=Cc11_g09580 | |
| 65065 chr11 manual_curation polypeptide 27029781 27030209 . - . ID=GSCOCP00032699001;Dbxref=TrEMBL:B9GVB1,TrEMBL:B9H337,TrEMBL:B9HWC5;Derives_from=GSCOCT00032699001;Name=Cc11_g09580;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Predicted protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032699001~ Putative Predicted protein~ unknown_gene~ complete;original_location=4312457..4312885;owner=coffea | |
| 65066 chr11 manual_curation exon 27029781 27030209 . - . Parent=GSCOCT00032699001 | |
| 65067 chr11 manual_curation CDS 27029781 27030209 . - 0 Parent=GSCOCT00032699001 | |
| 65068 chr11 manual_curation gene 27032651 27038081 . - . ID=GSCOCG00032698001;Name=Cc11_g09590 | |
| 65069 chr11 manual_curation mRNA 27032651 27038081 . - . ID=GSCOCT00032698001;Parent=GSCOCG00032698001;Name=Cc11_g09590 | |
| 65070 chr11 manual_curation polypeptide 27032862 27036766 . - . ID=GSCOCP00032698001;Dbxref=GENE3D:G3DSA:1.20.144.10,InterPro:IPR000326,InterPro:IPR016118,PFAM:PF01569,SMART:SM00014,SUPERFAMILY:SSF48317,SwissProt:Q8LFD1,SwissProt:Q9XI60,SwissProt:Q9ZU49,TAIR:AT1G15080.1,TAIR:AT2G01180.1,TAIR:AT3G02600.1,TrEMBL:B9HWC6,TrEMBL:D7T8Z3,TrEMBL:H6TBK5;Derives_from=GSCOCT00032698001;Name=Cc11_g09590;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0016020,CC_EC_number:3.1.3.4,PRODUCT:Lipid phosphate phosphatase 2,CC_functional_completeness:complete,CC_gene:LPP2,CC_gene:LPP3,CC_gene:LPP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032698001~ Lipid phosphate phosphatase 2~ LPP2~ complete;original_location=join(4305900..4305956%2C4306092..4306179%2C4306288..4306397%2C4306473..4306566%2C4307967..4308155%2C4308251..4308310%2C4309596..4309804);owner=coffea | |
| 65071 chr11 manual_curation exon 27037942 27038081 . - . Parent=GSCOCT00032698001 | |
| 65072 chr11 manual_curation exon 27036710 27036931 . - . Parent=GSCOCT00032698001 | |
| 65073 chr11 manual_curation exon 27036487 27036574 . - . Parent=GSCOCT00032698001 | |
| 65074 chr11 manual_curation exon 27036269 27036378 . - . Parent=GSCOCT00032698001 | |
| 65075 chr11 manual_curation exon 27036100 27036193 . - . Parent=GSCOCT00032698001 | |
| 65076 chr11 manual_curation exon 27034511 27034699 . - . Parent=GSCOCT00032698001 | |
| 65077 chr11 manual_curation exon 27034356 27034415 . - . Parent=GSCOCT00032698001 | |
| 65078 chr11 manual_curation exon 27032651 27033070 . - . Parent=GSCOCT00032698001 | |
| 65079 chr11 manual_curation CDS 27036710 27036766 . - 0 Parent=GSCOCT00032698001 | |
| 65080 chr11 manual_curation CDS 27036487 27036574 . - 0 Parent=GSCOCT00032698001 | |
| 65081 chr11 manual_curation CDS 27036269 27036378 . - 1 Parent=GSCOCT00032698001 | |
| 65082 chr11 manual_curation CDS 27036100 27036193 . - 0 Parent=GSCOCT00032698001 | |
| 65083 chr11 manual_curation CDS 27034511 27034699 . - 1 Parent=GSCOCT00032698001 | |
| 65084 chr11 manual_curation CDS 27034356 27034415 . - 1 Parent=GSCOCT00032698001 | |
| 65085 chr11 manual_curation CDS 27032862 27033070 . - 1 Parent=GSCOCT00032698001 | |
| 65086 chr11 manual_curation gene 27038817 27043651 . - . ID=GSCOCG00032697001;Name=Cc11_g09600 | |
| 65087 chr11 manual_curation mRNA 27038817 27043651 . - . ID=GSCOCT00032697001;Parent=GSCOCG00032697001;Name=Cc11_g09600 | |
| 65088 chr11 manual_curation polypeptide 27039219 27043217 . - . ID=GSCOCP00032697001;Dbxref=GENE3D:G3DSA:1.20.144.10,InterPro:IPR000326,InterPro:IPR016118,PFAM:PF01569,SMART:SM00014,SUPERFAMILY:SSF48317,SwissProt:Q8LFD1,SwissProt:Q9XI60,SwissProt:Q9ZU49,TAIR:AT1G15080.1,TAIR:AT2G01180.1,TAIR:AT3G02600.1,TrEMBL:B9HWC7,TrEMBL:F6HEU7,TrEMBL:G7KV76;Derives_from=GSCOCT00032697001;Name=Cc11_g09600;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0016020,CC_EC_number:3.1.3.4,PRODUCT:Putative lipid phosphate phosphatase 3%2C chloroplastic,CC_functional_completeness:complete,CC_gene:LPP3,CC_gene:LPP1,CC_gene:LPP2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032697001~ Putative lipid phosphate phosphatase 3%2C chloroplastic~ LPP3~ complete;original_location=join(4299449..4299499%2C4300540..4300764%2C4301268..4301355%2C4301531..4301640%2C4302003..4302093%2C4302193..4302381%2C4302504..4302563%2C4303248..4303447);owner=coffea | |
| 65089 chr11 manual_curation exon 27043350 27043651 . - . Parent=GSCOCT00032697001 | |
| 65090 chr11 manual_curation exon 27043167 27043252 . - . Parent=GSCOCT00032697001 | |
| 65091 chr11 manual_curation exon 27041902 27042126 . - . Parent=GSCOCT00032697001 | |
| 65092 chr11 manual_curation exon 27041311 27041398 . - . Parent=GSCOCT00032697001 | |
| 65093 chr11 manual_curation exon 27041026 27041135 . - . Parent=GSCOCT00032697001 | |
| 65094 chr11 manual_curation exon 27040573 27040663 . - . Parent=GSCOCT00032697001 | |
| 65095 chr11 manual_curation exon 27040285 27040473 . - . Parent=GSCOCT00032697001 | |
| 65096 chr11 manual_curation exon 27040103 27040162 . - . Parent=GSCOCT00032697001 | |
| 65097 chr11 manual_curation exon 27038817 27039418 . - . Parent=GSCOCT00032697001 | |
| 65098 chr11 manual_curation CDS 27043167 27043217 . - 0 Parent=GSCOCT00032697001 | |
| 65099 chr11 manual_curation CDS 27041902 27042126 . - 0 Parent=GSCOCT00032697001 | |
| 65100 chr11 manual_curation CDS 27041311 27041398 . - 0 Parent=GSCOCT00032697001 | |
| 65101 chr11 manual_curation CDS 27041026 27041135 . - 1 Parent=GSCOCT00032697001 | |
| 65102 chr11 manual_curation CDS 27040573 27040663 . - 0 Parent=GSCOCT00032697001 | |
| 65103 chr11 manual_curation CDS 27040285 27040473 . - 1 Parent=GSCOCT00032697001 | |
| 65104 chr11 manual_curation CDS 27040103 27040162 . - 1 Parent=GSCOCT00032697001 | |
| 65105 chr11 manual_curation CDS 27039219 27039418 . - 1 Parent=GSCOCT00032697001 | |
| 65106 chr11 manual_curation gene 27060409 27063184 . + . ID=GSCOCG00032696001;Name=Cc11_g09610 | |
| 65107 chr11 manual_curation mRNA 27060409 27063184 . + . ID=GSCOCT00032696001;Parent=GSCOCG00032696001;Name=Cc11_g09610 | |
| 65108 chr11 manual_curation polypeptide 27060409 27062842 . + . ID=GSCOCP00032696001;Dbxref=InterPro:IPR000270,PFAM:PF00564,SMART:SM00666,TAIR:AT2G01190.1,TAIR:AT3G18230.1,TAIR:AT4G05150.1,TrEMBL:B9HWC8,TrEMBL:B9SJW8,TrEMBL:F6HEU9;Derives_from=GSCOCT00032696001;Name=Cc11_g09610;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Octicosapeptide/Phox/Bem1p family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032696001~ Putative Octicosapeptide/Phox/Bem1p family protein~ unknown_gene~ complete;original_location=complement(join(4281485..4282257%2C4280900..4281409%2C4279824..4280673));owner=coffea | |
| 65109 chr11 manual_curation exon 27061993 27063184 . + . Parent=GSCOCT00032696001 | |
| 65110 chr11 manual_curation exon 27061257 27061766 . + . Parent=GSCOCT00032696001 | |
| 65111 chr11 manual_curation exon 27060409 27061181 . + . Parent=GSCOCT00032696001 | |
| 65112 chr11 manual_curation CDS 27061993 27062842 . + 2 Parent=GSCOCT00032696001 | |
| 65113 chr11 manual_curation CDS 27061257 27061766 . + 2 Parent=GSCOCT00032696001 | |
| 65114 chr11 manual_curation CDS 27060409 27061181 . + 0 Parent=GSCOCT00032696001 | |
| 65115 chr11 manual_curation gene 27068882 27075284 . - . ID=GSCOCG00032695001;Name=Cc11_g09620 | |
| 65116 chr11 manual_curation mRNA 27068882 27075284 . - . ID=GSCOCT00032695001;Parent=GSCOCG00032695001;Name=Cc11_g09620 | |
| 65117 chr11 manual_curation polypeptide 27069045 27075103 . - . ID=GSCOCP00032695001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019781,InterPro:IPR019782,InterPro:IPR020472,PFAM:PF00400,PRINTS:PR00320,PROFILE:PS50082,PROFILE:PS50294,SMART:SM00320,SUPERFAMILY:SSF50978,SwissProt:F4I1S7,SwissProt:Q5EBD9,SwissProt:Q86H45,TAIR:AT1G49540.2,TrEMBL:B9SJW7,TrEMBL:F6HEV0,TrEMBL:I1NFP8;Derives_from=GSCOCT00032695001;Name=Cc11_g09620;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Elongator complex protein 2,CC_functional_completeness:complete,CC_gene:ELP2,CC_gene:elp2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032695001~ Elongator complex protein 2~ ELP2~ complete;original_location=join(4267563..4267715%2C4267803..4267890%2C4268066..4268151%2C4269216..4269369%2C4269803..4269963%2C4270053..4270706%2C4271178..4271499%2C4271820..4272037%2C4272866..4273043%2C4273131..4273621);owner=coffea | |
| 65118 chr11 manual_curation exon 27074951 27075284 . - . Parent=GSCOCT00032695001 | |
| 65119 chr11 manual_curation exon 27074776 27074863 . - . Parent=GSCOCT00032695001 | |
| 65120 chr11 manual_curation exon 27074515 27074600 . - . Parent=GSCOCT00032695001 | |
| 65121 chr11 manual_curation exon 27073297 27073450 . - . Parent=GSCOCT00032695001 | |
| 65122 chr11 manual_curation exon 27072703 27072863 . - . Parent=GSCOCT00032695001 | |
| 65123 chr11 manual_curation exon 27071960 27072613 . - . Parent=GSCOCT00032695001 | |
| 65124 chr11 manual_curation exon 27071167 27071488 . - . Parent=GSCOCT00032695001 | |
| 65125 chr11 manual_curation exon 27070629 27070846 . - . Parent=GSCOCT00032695001 | |
| 65126 chr11 manual_curation exon 27069623 27069800 . - . Parent=GSCOCT00032695001 | |
| 65127 chr11 manual_curation exon 27068882 27069535 . - . Parent=GSCOCT00032695001 | |
| 65128 chr11 manual_curation CDS 27074951 27075103 . - 0 Parent=GSCOCT00032695001 | |
| 65129 chr11 manual_curation CDS 27074776 27074863 . - 0 Parent=GSCOCT00032695001 | |
| 65130 chr11 manual_curation CDS 27074515 27074600 . - 1 Parent=GSCOCT00032695001 | |
| 65131 chr11 manual_curation CDS 27073297 27073450 . - 0 Parent=GSCOCT00032695001 | |
| 65132 chr11 manual_curation CDS 27072703 27072863 . - 1 Parent=GSCOCT00032695001 | |
| 65133 chr11 manual_curation CDS 27071960 27072613 . - 0 Parent=GSCOCT00032695001 | |
| 65134 chr11 manual_curation CDS 27071167 27071488 . - 0 Parent=GSCOCT00032695001 | |
| 65135 chr11 manual_curation CDS 27070629 27070846 . - 1 Parent=GSCOCT00032695001 | |
| 65136 chr11 manual_curation CDS 27069623 27069800 . - 0 Parent=GSCOCT00032695001 | |
| 65137 chr11 manual_curation CDS 27069045 27069535 . - 1 Parent=GSCOCT00032695001 | |
| 65138 chr11 manual_curation gene 27076766 27080593 . + . ID=GSCOCG00032694001;Name=Cc11_g09630 | |
| 65139 chr11 manual_curation mRNA 27076766 27080593 . + . ID=GSCOCT00032694001;Parent=GSCOCG00032694001;Name=Cc11_g09630 | |
| 65140 chr11 manual_curation polypeptide 27076766 27080156 . + . ID=GSCOCP00032694001;Dbxref=InterPro:IPR016969,PIR:PIRSF031088,TAIR:AT1G15060.1,TAIR:AT1G73750.1,TrEMBL:B9HJ61,TrEMBL:B9HWD0,TrEMBL:B9SJW6;Derives_from=GSCOCT00032694001;Name=Cc11_g09630;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterised conserved protein UCP031088%2C alpha/beta hydrolase,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032694001~ Uncharacterised conserved protein UCP031088%2C alpha/beta hydrolase~ unknown_gene~ complete;original_location=complement(join(4265580..4265900%2C4265378..4265455%2C4263932..4264609%2C4263695..4263797%2C4263365..4263465%2C4263100..4263274%2C4262841..4263011%2C4262661..4262761%2C4262510..4262563));owner=coffea | |
| 65141 chr11 manual_curation exon 27080103 27080593 . + . Parent=GSCOCT00032694001 | |
| 65142 chr11 manual_curation exon 27079905 27080005 . + . Parent=GSCOCT00032694001 | |
| 65143 chr11 manual_curation exon 27079655 27079825 . + . Parent=GSCOCT00032694001 | |
| 65144 chr11 manual_curation exon 27079392 27079566 . + . Parent=GSCOCT00032694001 | |
| 65145 chr11 manual_curation exon 27079201 27079301 . + . Parent=GSCOCT00032694001 | |
| 65146 chr11 manual_curation exon 27078869 27078971 . + . Parent=GSCOCT00032694001 | |
| 65147 chr11 manual_curation exon 27078057 27078734 . + . Parent=GSCOCT00032694001 | |
| 65148 chr11 manual_curation exon 27077211 27077288 . + . Parent=GSCOCT00032694001 | |
| 65149 chr11 manual_curation exon 27076766 27077086 . + . Parent=GSCOCT00032694001 | |
| 65150 chr11 manual_curation CDS 27080103 27080156 . + 0 Parent=GSCOCT00032694001 | |
| 65151 chr11 manual_curation CDS 27079905 27080005 . + 1 Parent=GSCOCT00032694001 | |
| 65152 chr11 manual_curation CDS 27079655 27079825 . + 1 Parent=GSCOCT00032694001 | |
| 65153 chr11 manual_curation CDS 27079392 27079566 . + 0 Parent=GSCOCT00032694001 | |
| 65154 chr11 manual_curation CDS 27079201 27079301 . + 1 Parent=GSCOCT00032694001 | |
| 65155 chr11 manual_curation CDS 27078869 27078971 . + 0 Parent=GSCOCT00032694001 | |
| 65156 chr11 manual_curation CDS 27078057 27078734 . + 0 Parent=GSCOCT00032694001 | |
| 65157 chr11 manual_curation CDS 27077211 27077288 . + 0 Parent=GSCOCT00032694001 | |
| 65158 chr11 manual_curation CDS 27076766 27077086 . + 0 Parent=GSCOCT00032694001 | |
| 65159 chr11 manual_curation gene 27080817 27082818 . - . ID=GSCOCG00032693001;Name=Cc11_g09640 | |
| 65160 chr11 manual_curation mRNA 27080817 27082818 . - . ID=GSCOCT00032693001;Parent=GSCOCG00032693001;Name=Cc11_g09640 | |
| 65161 chr11 manual_curation polypeptide 27081023 27082525 . - . ID=GSCOCP00032693001;Dbxref=InterPro:IPR001841,PROFILE:PS50089,TAIR:AT1G17970.1,TAIR:AT1G73760.1,TAIR:AT5G24870.1,TrEMBL:A5BVW4,TrEMBL:F6GTP6,TrEMBL:F6HEV5;Derives_from=GSCOCT00032693001;Name=Cc11_g09640;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative RING/U-box superfamily protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032693001~ Putative RING/U-box superfamily protein~ unknown_gene~ fragment;original_location=join(4260141..4260410%2C4260505..4260657%2C4260749..4260823%2C4260925..4261080%2C4261509..4261643);owner=coffea | |
| 65162 chr11 manual_curation exon 27082256 27082818 . - . Parent=GSCOCT00032693001 | |
| 65163 chr11 manual_curation exon 27082009 27082161 . - . Parent=GSCOCT00032693001 | |
| 65164 chr11 manual_curation exon 27081843 27081917 . - . Parent=GSCOCT00032693001 | |
| 65165 chr11 manual_curation exon 27081586 27081741 . - . Parent=GSCOCT00032693001 | |
| 65166 chr11 manual_curation exon 27080817 27081157 . - . Parent=GSCOCT00032693001 | |
| 65167 chr11 manual_curation CDS 27082256 27082525 . - 0 Parent=GSCOCT00032693001 | |
| 65168 chr11 manual_curation CDS 27082009 27082161 . - 0 Parent=GSCOCT00032693001 | |
| 65169 chr11 manual_curation CDS 27081843 27081917 . - 0 Parent=GSCOCT00032693001 | |
| 65170 chr11 manual_curation CDS 27081586 27081741 . - 0 Parent=GSCOCT00032693001 | |
| 65171 chr11 manual_curation CDS 27081023 27081157 . - 0 Parent=GSCOCT00032693001 | |
| 65172 chr11 manual_curation gene 27085019 27086289 . + . ID=GSCOCG00032692001;Name=Cc11_g09650 | |
| 65173 chr11 manual_curation mRNA 27085019 27086289 . + . ID=GSCOCT00032692001;Parent=GSCOCG00032692001;Name=Cc11_g09650 | |
| 65174 chr11 manual_curation polypeptide 27085019 27086289 . + . ID=GSCOCP00032692001;Dbxref=InterPro:IPR003311,InterPro:IPR011525,PFAM:PF02309,PROFILE:PS50962,SwissProt:A2XB18,SwissProt:Q8RYC6,SwissProt:Q9C5X0,TAIR:AT1G15050.1,TAIR:AT2G01200.2,TAIR:AT2G33310.2,TrEMBL:F6HEV6,TrEMBL:F8V9M3,TrEMBL:G9HPX3;Derives_from=GSCOCT00032692001;Name=Cc11_g09650;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0045449,GO:0046983,CC_EC_number:missing_EC_number,PRODUCT:Putative Auxin-responsive protein IAA32,CC_functional_completeness:complete,CC_gene:IAA32,CC_gene:IAA34,CC_gene:IAA10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032692001~ Putative Auxin-responsive protein IAA32~ IAA32~ complete;original_location=complement(join(4257497..4257647%2C4256837..4257076%2C4256640..4256748%2C4256377..4256467));owner=coffea | |
| 65175 chr11 manual_curation exon 27086199 27086289 . + . Parent=GSCOCT00032692001 | |
| 65176 chr11 manual_curation exon 27085918 27086026 . + . Parent=GSCOCT00032692001 | |
| 65177 chr11 manual_curation exon 27085590 27085829 . + . Parent=GSCOCT00032692001 | |
| 65178 chr11 manual_curation exon 27085019 27085169 . + . Parent=GSCOCT00032692001 | |
| 65179 chr11 manual_curation CDS 27086199 27086289 . + 2 Parent=GSCOCT00032692001 | |
| 65180 chr11 manual_curation CDS 27085918 27086026 . + 1 Parent=GSCOCT00032692001 | |
| 65181 chr11 manual_curation CDS 27085590 27085829 . + 1 Parent=GSCOCT00032692001 | |
| 65182 chr11 manual_curation CDS 27085019 27085169 . + 0 Parent=GSCOCT00032692001 | |
| 65183 chr11 manual_curation gene 27091834 27094794 . - . ID=GSCOCG00032691001;Name=Cc11_g09660 | |
| 65184 chr11 manual_curation mRNA 27091834 27094794 . - . ID=GSCOCT00032691001;Parent=GSCOCG00032691001;Name=Cc11_g09660 | |
| 65185 chr11 manual_curation polypeptide 27092179 27094433 . - . ID=GSCOCP00032691001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:C0LGS3,SwissProt:Q94C77,SwissProt:Q9C9N5,TAIR:AT1G25320.1,TAIR:AT1G66830.1,TAIR:AT2G01210.1,TrEMBL:A5AKH2,TrEMBL:B9HWD3,TrEMBL:D7T903;Derives_from=GSCOCT00032691001;Name=Cc11_g09660;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Probable inactive leucine-rich repeat receptor-like protein kinase At1g66830,CC_functional_completeness:complete,CC_gene:At1g66830,CC_gene:At4g37250,CC_gene:At4g34220;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032691001~ Probable inactive leucine-rich repeat receptor-like protein kinase At1g66830~ At1g66830~ complete;original_location=join(4248233..4249116%2C4249162..4249703%2C4249817..4250487);owner=coffea | |
| 65186 chr11 manual_curation exon 27093550 27094794 . - . Parent=GSCOCT00032691001 | |
| 65187 chr11 manual_curation exon 27092963 27093504 . - . Parent=GSCOCT00032691001 | |
| 65188 chr11 manual_curation exon 27091834 27092849 . - . Parent=GSCOCT00032691001 | |
| 65189 chr11 manual_curation CDS 27093550 27094433 . - 0 Parent=GSCOCT00032691001 | |
| 65190 chr11 manual_curation CDS 27092963 27093504 . - 2 Parent=GSCOCT00032691001 | |
| 65191 chr11 manual_curation CDS 27092179 27092849 . - 1 Parent=GSCOCT00032691001 | |
| 65192 chr11 manual_curation gene 27107961 27112877 . + . ID=GSCOCG00032689001;Name=Cc11_g09670 | |
| 65193 chr11 manual_curation mRNA 27107961 27112877 . + . ID=GSCOCT00032689001;Parent=GSCOCG00032689001;Name=Cc11_g09670 | |
| 65194 chr11 manual_curation polypeptide 27108077 27112636 . + . ID=GSCOCP00032689001;Dbxref=InterPro:IPR004820,PFAM:PF01467,TAIR:AT2G01220.2,TAIR:AT3G27610.2,TrEMBL:B9HWD4,TrEMBL:B9SJW2,TrEMBL:D7T904;Derives_from=GSCOCT00032689001;Name=Cc11_g09670;Ontology_term=CC_evidence_code:ISS,GO:0009058,GO:0016779,CC_EC_number:missing_EC_number,PRODUCT:Nucleotidylyl transferase superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032689001~ Nucleotidylyl transferase superfamily protein~ unknown_gene~ complete;original_location=complement(join(4234401..4234589%2C4234207..4234291%2C4233663..4233732%2C4233505..4233565%2C4233372..4233425%2C4232430..4232586%2C4232105..4232195%2C4231706..4231815%2C4231023..4231129%2C4230238..4230348%2C4230030..4230146));owner=coffea | |
| 65195 chr11 manual_curation exon 27112520 27112877 . + . Parent=GSCOCT00032689001 | |
| 65196 chr11 manual_curation exon 27112318 27112428 . + . Parent=GSCOCT00032689001 | |
| 65197 chr11 manual_curation exon 27111537 27111643 . + . Parent=GSCOCT00032689001 | |
| 65198 chr11 manual_curation exon 27110851 27110960 . + . Parent=GSCOCT00032689001 | |
| 65199 chr11 manual_curation exon 27110471 27110561 . + . Parent=GSCOCT00032689001 | |
| 65200 chr11 manual_curation exon 27110080 27110236 . + . Parent=GSCOCT00032689001 | |
| 65201 chr11 manual_curation exon 27109241 27109294 . + . Parent=GSCOCT00032689001 | |
| 65202 chr11 manual_curation exon 27109101 27109161 . + . Parent=GSCOCT00032689001 | |
| 65203 chr11 manual_curation exon 27108934 27109003 . + . Parent=GSCOCT00032689001 | |
| 65204 chr11 manual_curation exon 27108375 27108459 . + . Parent=GSCOCT00032689001 | |
| 65205 chr11 manual_curation exon 27107961 27108265 . + . Parent=GSCOCT00032689001 | |
| 65206 chr11 manual_curation CDS 27112520 27112636 . + 0 Parent=GSCOCT00032689001 | |
| 65207 chr11 manual_curation CDS 27112318 27112428 . + 0 Parent=GSCOCT00032689001 | |
| 65208 chr11 manual_curation CDS 27111537 27111643 . + 1 Parent=GSCOCT00032689001 | |
| 65209 chr11 manual_curation CDS 27110851 27110960 . + 2 Parent=GSCOCT00032689001 | |
| 65210 chr11 manual_curation CDS 27110471 27110561 . + 1 Parent=GSCOCT00032689001 | |
| 65211 chr11 manual_curation CDS 27110080 27110236 . + 0 Parent=GSCOCT00032689001 | |
| 65212 chr11 manual_curation CDS 27109241 27109294 . + 0 Parent=GSCOCT00032689001 | |
| 65213 chr11 manual_curation CDS 27109101 27109161 . + 2 Parent=GSCOCT00032689001 | |
| 65214 chr11 manual_curation CDS 27108934 27109003 . + 1 Parent=GSCOCT00032689001 | |
| 65215 chr11 manual_curation CDS 27108375 27108459 . + 0 Parent=GSCOCT00032689001 | |
| 65216 chr11 manual_curation CDS 27108077 27108265 . + 0 Parent=GSCOCT00032689001 | |
| 65217 chr11 manual_curation gene 27113011 27113739 . - . ID=GSCOCG00032688001;Name=Cc11_g09680 | |
| 65218 chr11 manual_curation mRNA 27113011 27113739 . - . ID=GSCOCT00032688001;Parent=GSCOCG00032688001;Name=Cc11_g09680 | |
| 65219 chr11 manual_curation polypeptide 27113391 27113630 . - . ID=GSCOCP00032688001;Derives_from=GSCOCT00032688001;Name=Cc11_g09680;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032688001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=4229036..4229275;owner=coffea | |
| 65220 chr11 manual_curation exon 27113011 27113739 . - . Parent=GSCOCT00032688001 | |
| 65221 chr11 manual_curation CDS 27113391 27113630 . - 0 Parent=GSCOCT00032688001 | |
| 65222 chr11 manual_curation gene 27116465 27118380 . - . ID=GSCOCG00032687001;Name=Cc11_g09690 | |
| 65223 chr11 manual_curation mRNA 27116465 27118380 . - . ID=GSCOCT00032687001;Parent=GSCOCG00032687001;Name=Cc11_g09690 | |
| 65224 chr11 manual_curation polypeptide 27116564 27118324 . - . ID=GSCOCP00032687001;Dbxref=InterPro:IPR003388,PANTHER:PTHR10994,PFAM:PF02453,PROFILE:PS50845,SwissProt:A2RVT6,SwissProt:Q9LJQ5,SwissProt:Q9SUT9,TAIR:AT3G18260.1,TAIR:AT4G11220.1,TAIR:AT4G23630.1,TrEMBL:C6SZ82,TrEMBL:F6HEV8,TrEMBL:I1NFN7;Derives_from=GSCOCT00032687001;Name=Cc11_g09690;Ontology_term=CC_evidence_code:ISS,GO:0005783,CC_EC_number:missing_EC_number,PRODUCT:Putative Reticulon-like protein B9,CC_functional_completeness:complete,CC_gene:RTNLB9,CC_gene:RTNLB2,CC_gene:RTNLB14;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032687001~ Putative Reticulon-like protein B9~ RTNLB9~ complete;original_location=join(4224342..4224441%2C4225197..4225377%2C4225500..4225629%2C4225749..4225818%2C4225933..4226102);owner=coffea | |
| 65225 chr11 manual_curation exon 27118225 27118380 . - . Parent=GSCOCT00032687001 | |
| 65226 chr11 manual_curation exon 27117289 27117469 . - . Parent=GSCOCT00032687001 | |
| 65227 chr11 manual_curation exon 27117037 27117166 . - . Parent=GSCOCT00032687001 | |
| 65228 chr11 manual_curation exon 27116848 27116917 . - . Parent=GSCOCT00032687001 | |
| 65229 chr11 manual_curation exon 27116465 27116733 . - . Parent=GSCOCT00032687001 | |
| 65230 chr11 manual_curation CDS 27118225 27118324 . - 0 Parent=GSCOCT00032687001 | |
| 65231 chr11 manual_curation CDS 27117289 27117469 . - 1 Parent=GSCOCT00032687001 | |
| 65232 chr11 manual_curation CDS 27117037 27117166 . - 2 Parent=GSCOCT00032687001 | |
| 65233 chr11 manual_curation CDS 27116848 27116917 . - 0 Parent=GSCOCT00032687001 | |
| 65234 chr11 manual_curation CDS 27116564 27116733 . - 1 Parent=GSCOCT00032687001 | |
| 65235 chr11 manual_curation gene 27124108 27124380 . + . ID=GSCOCG00032686001;Name=Cc11_g09700 | |
| 65236 chr11 manual_curation mRNA 27124108 27124380 . + . ID=GSCOCT00032686001;Parent=GSCOCG00032686001;Name=Cc11_g09700 | |
| 65237 chr11 manual_curation polypeptide 27124108 27124380 . + . ID=GSCOCP00032686001;Dbxref=GENE3D:G3DSA:1.10.110.10,InterPro:IPR003612,InterPro:IPR013770,InterPro:IPR016140,SMART:SM00499,SUPERFAMILY:SSF47699,SwissProt:P20145,SwissProt:P82353,SwissProt:Q43681,TAIR:AT1G48750.1,TAIR:AT1G73780.1,TAIR:AT3G18280.1,TrEMBL:B7FM99,TrEMBL:F6GTP3,TrEMBL:I1KJ10;Derives_from=GSCOCT00032686001;Name=Cc11_g09700;Ontology_term=CC_evidence_code:ISS,GO:0006869,CC_EC_number:missing_EC_number,PRODUCT:Non-specific lipid-transfer protein 2,CC_functional_completeness:modules,CC_gene:LTP2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032686001~ Non-specific lipid-transfer protein 2~ LTP2~ modules;original_location=complement(4218286..4218558);owner=coffea | |
| 65238 chr11 manual_curation exon 27124108 27124380 . + . Parent=GSCOCT00032686001 | |
| 65239 chr11 manual_curation CDS 27124108 27124380 . + 0 Parent=GSCOCT00032686001 | |
| 65240 chr11 manual_curation gene 27125703 27128601 . - . ID=GSCOCG00032684001;Name=Cc11_g09710 | |
| 65241 chr11 manual_curation mRNA 27125703 27128601 . - . ID=GSCOCT00032684001;Parent=GSCOCG00032684001;Name=Cc11_g09710 | |
| 65242 chr11 manual_curation polypeptide 27125951 27128522 . - . ID=GSCOCP00032684001;Dbxref=InterPro:IPR009606,PFAM:PF06749,TAIR:AT1G52910.1,TAIR:AT1G68220.1,TAIR:AT3G15480.1,TrEMBL:A5BKM2,TrEMBL:B9HJ58,TrEMBL:B9HWD7;Derives_from=GSCOCT00032684001;Name=Cc11_g09710;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF1218),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032684001~ Protein of unknown function (DUF1218)~ unknown_gene~ complete;original_location=join(4214144..4214236%2C4214344..4214549%2C4216427..4216715);owner=coffea | |
| 65243 chr11 manual_curation exon 27128430 27128601 . - . Parent=GSCOCT00032684001 | |
| 65244 chr11 manual_curation exon 27128117 27128322 . - . Parent=GSCOCT00032684001 | |
| 65245 chr11 manual_curation exon 27125703 27126239 . - . Parent=GSCOCT00032684001 | |
| 65246 chr11 manual_curation CDS 27128430 27128522 . - 0 Parent=GSCOCT00032684001 | |
| 65247 chr11 manual_curation CDS 27128117 27128322 . - 0 Parent=GSCOCT00032684001 | |
| 65248 chr11 manual_curation CDS 27125951 27126239 . - 2 Parent=GSCOCT00032684001 | |
| 65249 chr11 manual_curation gene 27145508 27149721 . - . ID=GSCOCG00032681001;Name=Cc11_g09720 | |
| 65250 chr11 manual_curation mRNA 27145508 27149721 . - . ID=GSCOCT00032681001;Parent=GSCOCG00032681001;Name=Cc11_g09720 | |
| 65251 chr11 manual_curation polypeptide 27146207 27149181 . - . ID=GSCOCP00032681001;Dbxref=InterPro:IPR008507,PFAM:PF05623,TAIR:AT1G15030.1,TAIR:AT2G01260.1,TAIR:AT4G16100.1,TrEMBL:A9P9W8,TrEMBL:B9HWD9,TrEMBL:B9SM03;Derives_from=GSCOCT00032681001;Name=Cc11_g09720;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF789),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032681001~ Protein of unknown function (DUF789)~ unknown_gene~ complete;original_location=join(4193485..4193787%2C4194355..4194566%2C4195331..4195625%2C4195712..4195797%2C4195893..4195984%2C4196227..4196459);owner=coffea | |
| 65252 chr11 manual_curation exon 27148879 27149721 . - . Parent=GSCOCT00032681001 | |
| 65253 chr11 manual_curation exon 27148100 27148311 . - . Parent=GSCOCT00032681001 | |
| 65254 chr11 manual_curation exon 27147041 27147335 . - . Parent=GSCOCT00032681001 | |
| 65255 chr11 manual_curation exon 27146869 27146954 . - . Parent=GSCOCT00032681001 | |
| 65256 chr11 manual_curation exon 27146682 27146773 . - . Parent=GSCOCT00032681001 | |
| 65257 chr11 manual_curation exon 27145508 27146439 . - . Parent=GSCOCT00032681001 | |
| 65258 chr11 manual_curation CDS 27148879 27149181 . - 0 Parent=GSCOCT00032681001 | |
| 65259 chr11 manual_curation CDS 27148100 27148311 . - 0 Parent=GSCOCT00032681001 | |
| 65260 chr11 manual_curation CDS 27147041 27147335 . - 2 Parent=GSCOCT00032681001 | |
| 65261 chr11 manual_curation CDS 27146869 27146954 . - 0 Parent=GSCOCT00032681001 | |
| 65262 chr11 manual_curation CDS 27146682 27146773 . - 2 Parent=GSCOCT00032681001 | |
| 65263 chr11 manual_curation CDS 27146207 27146439 . - 1 Parent=GSCOCT00032681001 | |
| 65264 chr11 manual_curation gene 27164010 27165397 . + . ID=GSCOCG00032680001;Name=Cc11_g09730 | |
| 65265 chr11 manual_curation mRNA 27164010 27165397 . + . ID=GSCOCT00032680001;Parent=GSCOCG00032680001;Name=Cc11_g09730 | |
| 65266 chr11 manual_curation polypeptide 27164010 27165298 . + . ID=GSCOCP00032680001;Dbxref=SwissProt:P0C5E2,TAIR:AT1G18390.2,TrEMBL:B9HWE1,TrEMBL:B9HWE4,TrEMBL:D7T913;Derives_from=GSCOCT00032680001;Name=Cc11_g09730;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable serine/threonine-protein kinase At1g18390,CC_functional_completeness:fragment,CC_gene:At1g18390;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032680001~ Putative Probable serine/threonine-protein kinase At1g18390~ At1g18390~ fragment;original_location=complement(join(4177903..4178656%2C4177368..4177402));owner=coffea | |
| 65267 chr11 manual_curation exon 27165264 27165397 . + . Parent=GSCOCT00032680001 | |
| 65268 chr11 manual_curation exon 27164010 27164763 . + . Parent=GSCOCT00032680001 | |
| 65269 chr11 manual_curation CDS 27165264 27165298 . + 1 Parent=GSCOCT00032680001 | |
| 65270 chr11 manual_curation CDS 27164010 27164763 . + 0 Parent=GSCOCT00032680001 | |
| 65271 chr11 manual_curation gene 27168626 27168947 . - . ID=GSCOCG00032678001;Name=Cc11_g09740 | |
| 65272 chr11 manual_curation mRNA 27168626 27168947 . - . ID=GSCOCT00032678001;Parent=GSCOCG00032678001;Name=Cc11_g09740 | |
| 65273 chr11 manual_curation polypeptide 27168685 27168947 . - . ID=GSCOCP00032678001;Derives_from=GSCOCT00032678001;Name=Cc11_g09740;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032678001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(4173719..4173860%2C4173938..4173981);owner=coffea | |
| 65274 chr11 manual_curation exon 27168806 27168947 . - . Parent=GSCOCT00032678001 | |
| 65275 chr11 manual_curation exon 27168626 27168728 . - . Parent=GSCOCT00032678001 | |
| 65276 chr11 manual_curation CDS 27168806 27168947 . - 0 Parent=GSCOCT00032678001 | |
| 65277 chr11 manual_curation CDS 27168685 27168728 . - 1 Parent=GSCOCT00032678001 | |
| 65278 chr11 manual_curation gene 27170921 27173102 . + . ID=GSCOCG00032676001;Name=Cc11_g09750 | |
| 65279 chr11 manual_curation mRNA 27170921 27173102 . + . ID=GSCOCT00032676001;Parent=GSCOCG00032676001;Name=Cc11_g09750 | |
| 65280 chr11 manual_curation polypeptide 27171391 27172780 . + . ID=GSCOCP00032676001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:P0C5E2,SwissProt:Q8GYF5,SwissProt:Q8RY67,TAIR:AT1G18390.2,TAIR:AT1G25390.1,TAIR:AT1G66880.1,TrEMBL:A5AQE2,TrEMBL:B9SLZ8,TrEMBL:F6HFM0;Derives_from=GSCOCT00032676001;Name=Cc11_g09750;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.10.2,PRODUCT:Probable serine/threonine-protein kinase At1g18390,CC_functional_completeness:fragment,CC_gene:At1g18390,CC_gene:WAKL14,CC_gene:WAKL21;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032676001~ Probable serine/threonine-protein kinase At1g18390~ At1g18390~ fragment;original_location=complement(join(4171002..4171275%2C4169886..4170856));owner=coffea | |
| 65281 chr11 manual_curation exon 27171810 27173102 . + . Parent=GSCOCT00032676001 | |
| 65282 chr11 manual_curation exon 27170921 27171664 . + . Parent=GSCOCT00032676001 | |
| 65283 chr11 manual_curation CDS 27171810 27172780 . + 1 Parent=GSCOCT00032676001 | |
| 65284 chr11 manual_curation CDS 27171391 27171664 . + 0 Parent=GSCOCT00032676001 | |
| 65285 chr11 manual_curation gene 27173978 27178710 . - . ID=GSCOCG00032675001;Name=Cc11_g09760 | |
| 65286 chr11 manual_curation mRNA 27173978 27178710 . - . ID=GSCOCT00032675001;Parent=GSCOCG00032675001;Name=Cc11_g09760 | |
| 65287 chr11 manual_curation polypeptide 27174210 27178489 . - . ID=GSCOCP00032675001;Dbxref=InterPro:IPR001993,InterPro:IPR002067,InterPro:IPR002113,InterPro:IPR018108,PANTHER:PTHR11896,PFAM:PF00153,PRINTS:PR00926,PRINTS:PR00927,PROFILE:PS50920,SUPERFAMILY:SSF103506,SwissProt:P39953,SwissProt:P40556,SwissProt:Q54FU9,TAIR:AT1G25380.1,TAIR:AT2G47490.1,TAIR:AT5G66380.1,TrEMBL:A5B5E6,TrEMBL:B9HWF0,TrEMBL:D7T911;Derives_from=GSCOCT00032675001;Name=Cc11_g09760;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0005488,GO:0005743,GO:0006810,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Putative Mitochondrial substrate carrier family protein W,CC_functional_completeness:modules,CC_gene:mcfW,CC_gene:YIA6,CC_gene:YEA6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032675001~ Putative Mitochondrial substrate carrier family protein W~ mcfW~ modules;original_location=join(4164177..4164255%2C4164413..4164508%2C4165417..4165523%2C4166186..4166234%2C4166404..4166516%2C4167326..4167420%2C4167662..4167750%2C4167850..4167944%2C4168067..4168456);owner=coffea | |
| 65288 chr11 manual_curation exon 27178411 27178710 . - . Parent=GSCOCT00032675001 | |
| 65289 chr11 manual_curation exon 27178158 27178253 . - . Parent=GSCOCT00032675001 | |
| 65290 chr11 manual_curation exon 27177143 27177249 . - . Parent=GSCOCT00032675001 | |
| 65291 chr11 manual_curation exon 27176432 27176480 . - . Parent=GSCOCT00032675001 | |
| 65292 chr11 manual_curation exon 27176150 27176262 . - . Parent=GSCOCT00032675001 | |
| 65293 chr11 manual_curation exon 27175246 27175340 . - . Parent=GSCOCT00032675001 | |
| 65294 chr11 manual_curation exon 27174916 27175004 . - . Parent=GSCOCT00032675001 | |
| 65295 chr11 manual_curation exon 27174722 27174816 . - . Parent=GSCOCT00032675001 | |
| 65296 chr11 manual_curation exon 27173978 27174599 . - . Parent=GSCOCT00032675001 | |
| 65297 chr11 manual_curation CDS 27178411 27178489 . - 0 Parent=GSCOCT00032675001 | |
| 65298 chr11 manual_curation CDS 27178158 27178253 . - 1 Parent=GSCOCT00032675001 | |
| 65299 chr11 manual_curation CDS 27177143 27177249 . - 1 Parent=GSCOCT00032675001 | |
| 65300 chr11 manual_curation CDS 27176432 27176480 . - 0 Parent=GSCOCT00032675001 | |
| 65301 chr11 manual_curation CDS 27176150 27176262 . - 1 Parent=GSCOCT00032675001 | |
| 65302 chr11 manual_curation CDS 27175246 27175340 . - 0 Parent=GSCOCT00032675001 | |
| 65303 chr11 manual_curation CDS 27174916 27175004 . - 2 Parent=GSCOCT00032675001 | |
| 65304 chr11 manual_curation CDS 27174722 27174816 . - 1 Parent=GSCOCT00032675001 | |
| 65305 chr11 manual_curation CDS 27174210 27174599 . - 0 Parent=GSCOCT00032675001 | |
| 65306 chr11 manual_curation gene 27186487 27190598 . + . ID=GSCOCG00032673001;Name=Cc11_g09770 | |
| 65307 chr11 manual_curation mRNA 27186487 27190598 . + . ID=GSCOCT00032673001;Parent=GSCOCG00032673001;Name=Cc11_g09770 | |
| 65308 chr11 manual_curation polypeptide 27187018 27190252 . + . ID=GSCOCP00032673001;Dbxref=GENE3D:G3DSA:3.60.40.10,InterPro:IPR001932,InterPro:IPR014045,InterPro:IPR015655,PANTHER:PTHR13832,PFAM:PF00481,SMART:SM00331,SMART:SM00332,SUPERFAMILY:SSF81606,SwissProt:O80492,SwissProt:Q0JMD4,SwissProt:Q9M9C6,TAIR:AT1G09160.2,TAIR:AT1G47380.1,TAIR:AT1G68410.1,TrEMBL:A5B5E5,TrEMBL:B9SLZ1,TrEMBL:D7T912;Derives_from=GSCOCT00032673001;Name=Cc11_g09770;Ontology_term=CC_evidence_code:ISS,GO:0003824,CC_EC_number:3.1.3.16,PRODUCT:Probable protein phosphatase 2C 15,CC_functional_completeness:complete,CC_gene:At1g68410,CC_gene:Os01g0513100,CC_gene:At1g09160;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032673001~ Probable protein phosphatase 2C 15~ At1g68410~ complete;original_location=complement(join(4155436..4155648%2C4154750..4154831%2C4154408..4154561%2C4154270..4154333%2C4154025..4154132%2C4153709..4153834%2C4153332..4153564%2C4152414..4152633));owner=coffea | |
| 65309 chr11 manual_curation exon 27186487 27186617 . + . Parent=GSCOCT00032673001 | |
| 65310 chr11 manual_curation exon 27190033 27190598 . + . Parent=GSCOCT00032673001 | |
| 65311 chr11 manual_curation exon 27189102 27189334 . + . Parent=GSCOCT00032673001 | |
| 65312 chr11 manual_curation exon 27188832 27188957 . + . Parent=GSCOCT00032673001 | |
| 65313 chr11 manual_curation exon 27188534 27188641 . + . Parent=GSCOCT00032673001 | |
| 65314 chr11 manual_curation exon 27188333 27188396 . + . Parent=GSCOCT00032673001 | |
| 65315 chr11 manual_curation exon 27188105 27188258 . + . Parent=GSCOCT00032673001 | |
| 65316 chr11 manual_curation exon 27187835 27187916 . + . Parent=GSCOCT00032673001 | |
| 65317 chr11 manual_curation exon 27186759 27187230 . + . Parent=GSCOCT00032673001 | |
| 65318 chr11 manual_curation CDS 27190033 27190252 . + 2 Parent=GSCOCT00032673001 | |
| 65319 chr11 manual_curation CDS 27189102 27189334 . + 0 Parent=GSCOCT00032673001 | |
| 65320 chr11 manual_curation CDS 27188832 27188957 . + 0 Parent=GSCOCT00032673001 | |
| 65321 chr11 manual_curation CDS 27188534 27188641 . + 0 Parent=GSCOCT00032673001 | |
| 65322 chr11 manual_curation CDS 27188333 27188396 . + 2 Parent=GSCOCT00032673001 | |
| 65323 chr11 manual_curation CDS 27188105 27188258 . + 1 Parent=GSCOCT00032673001 | |
| 65324 chr11 manual_curation CDS 27187835 27187916 . + 0 Parent=GSCOCT00032673001 | |
| 65325 chr11 manual_curation CDS 27187018 27187230 . + 0 Parent=GSCOCT00032673001 | |
| 65326 chr11 manual_curation gene 27191369 27191539 . + . ID=GSCOCG00032671001;Name=Cc11_g09780 | |
| 65327 chr11 manual_curation mRNA 27191369 27191539 . + . ID=GSCOCT00032671001;Parent=GSCOCG00032671001;Name=Cc11_g09780 | |
| 65328 chr11 manual_curation polypeptide 27191369 27191539 . + . ID=GSCOCP00032671001;Dbxref=SwissProt:Q9M9C6,TAIR:AT1G68410.1,TrEMBL:A5B5E5,TrEMBL:B9HJ53,TrEMBL:D7T912;Derives_from=GSCOCT00032671001;Name=Cc11_g09780;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:At1g68410;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032671001~ Hypothetical protein~ At1g68410~ missing_functional_completeness;original_location=complement(4151127..4151297);owner=coffea | |
| 65329 chr11 manual_curation exon 27191369 27191539 . + . Parent=GSCOCT00032671001 | |
| 65330 chr11 manual_curation CDS 27191369 27191539 . + 0 Parent=GSCOCT00032671001 | |
| 65331 chr11 manual_curation gene 27199473 27202025 . + . ID=GSCOCG00032670001;Name=Cc11_g09790 | |
| 65332 chr11 manual_curation mRNA 27199473 27202025 . + . ID=GSCOCT00032670001;Parent=GSCOCG00032670001;Name=Cc11_g09790 | |
| 65333 chr11 manual_curation polypeptide 27199663 27202025 . + . ID=GSCOCP00032670001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q3ECH2,SwissProt:Q9FID5,SwissProt:Q9FID6,TAIR:AT1G66920.2,TAIR:AT1G70250.1,TAIR:AT5G38280.1,TrEMBL:A5B272,TrEMBL:A5B5E5,TrEMBL:D3G6F0;Derives_from=GSCOCT00032670001;Name=Cc11_g09790;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Protein kinase superfamily protein,CC_functional_completeness:complete,CC_gene:At5g39030,CC_gene:At5g39020,CC_gene:At1g67000;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032670001~ Putative Protein kinase superfamily protein~ At5g39030~ complete;original_location=complement(join(4142238..4143003%2C4141983..4142042%2C4140641..4141734));owner=coffea | |
| 65334 chr11 manual_curation exon 27200932 27202025 . + . Parent=GSCOCT00032670001 | |
| 65335 chr11 manual_curation exon 27200624 27200683 . + . Parent=GSCOCT00032670001 | |
| 65336 chr11 manual_curation exon 27199473 27200428 . + . Parent=GSCOCT00032670001 | |
| 65337 chr11 manual_curation CDS 27200932 27202025 . + 1 Parent=GSCOCT00032670001 | |
| 65338 chr11 manual_curation CDS 27200624 27200683 . + 1 Parent=GSCOCT00032670001 | |
| 65339 chr11 manual_curation CDS 27199663 27200428 . + 0 Parent=GSCOCT00032670001 | |
| 65340 chr11 manual_curation gene 27206959 27210565 . + . ID=GSCOCG00032668001;Name=Cc11_g09800 | |
| 65341 chr11 manual_curation mRNA 27206959 27210565 . + . ID=GSCOCT00032668001;Parent=GSCOCG00032668001;Name=Cc11_g09800 | |
| 65342 chr11 manual_curation polypeptide 27206959 27210269 . + . ID=GSCOCP00032668001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00107,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q9LP77,SwissProt:Q9LVM0,SwissProt:Q9M9C5,TAIR:AT1G68400.1,TAIR:AT2G36570.1,TAIR:AT5G58300.1,TrEMBL:B9HWF1,TrEMBL:F6HFM6,TrEMBL:I1LEU4;Derives_from=GSCOCT00032668001;Name=Cc11_g09800;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Probable leucine-rich repeat receptor-like protein kinase At1g68400,CC_functional_completeness:complete,CC_gene:At1g68400,CC_gene:At5g58300,CC_gene:RKL1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032668001~ Probable leucine-rich repeat receptor-like protein kinase At1g68400~ At1g68400~ complete;original_location=complement(join(4134354..4135707%2C4132397..4133067));owner=coffea | |
| 65343 chr11 manual_curation exon 27209599 27210565 . + . Parent=GSCOCT00032668001 | |
| 65344 chr11 manual_curation exon 27206959 27208312 . + . Parent=GSCOCT00032668001 | |
| 65345 chr11 manual_curation CDS 27209599 27210269 . + 1 Parent=GSCOCT00032668001 | |
| 65346 chr11 manual_curation CDS 27206959 27208312 . + 0 Parent=GSCOCT00032668001 | |
| 65347 chr11 manual_curation gene 27214160 27216799 . - . ID=GSCOCG00032667001;Name=Cc11_g09810 | |
| 65348 chr11 manual_curation mRNA 27214160 27216799 . - . ID=GSCOCT00032667001;Parent=GSCOCG00032667001;Name=Cc11_g09810 | |
| 65349 chr11 manual_curation polypeptide 27214475 27216103 . - . ID=GSCOCP00032667001;Dbxref=InterPro:IPR003406,PFAM:PF02485,TAIR:AT1G68380.1,TAIR:AT1G68390.1,TAIR:AT5G11730.1,TrEMBL:B9HJ52,TrEMBL:B9HWF2,TrEMBL:G7JZH3;Derives_from=GSCOCT00032667001;Name=Cc11_g09810;Ontology_term=CC_evidence_code:ISS,GO:0008375,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Core-2/I-branching beta-1%2C6-N-acetylglucosaminyltransferase family protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032667001~ Core-2/I-branching beta-1%2C6-N-acetylglucosaminyltransferase family protein~ unknown_gene~ fragment;original_location=join(4126563..4126808%2C4127547..4128191);owner=coffea | |
| 65350 chr11 manual_curation exon 27215858 27216799 . - . Parent=GSCOCT00032667001 | |
| 65351 chr11 manual_curation exon 27214160 27215119 . - . Parent=GSCOCT00032667001 | |
| 65352 chr11 manual_curation CDS 27215858 27216103 . - 0 Parent=GSCOCT00032667001 | |
| 65353 chr11 manual_curation CDS 27214475 27215119 . - 0 Parent=GSCOCT00032667001 | |
| 65354 chr11 manual_curation gene 27222532 27223849 . - . ID=GSCOCG00032666001;Name=Cc11_g09820 | |
| 65355 chr11 manual_curation mRNA 27222532 27223849 . - . ID=GSCOCT00032666001;Parent=GSCOCG00032666001;Name=Cc11_g09820 | |
| 65356 chr11 manual_curation polypeptide 27222532 27223618 . - . ID=GSCOCP00032666001;Dbxref=InterPro:IPR003406,PFAM:PF02485,TAIR:AT1G10880.1,TAIR:AT3G21310.1,TAIR:AT5G11730.1,TrEMBL:B9HWF3,TrEMBL:D7T919,TrEMBL:Q0WR07;Derives_from=GSCOCT00032666001;Name=Cc11_g09820;Ontology_term=CC_evidence_code:ISS,GO:0008375,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Core-2/I-branching beta-1%2C6-N-acetylglucosaminyltransferase family protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032666001~ Core-2/I-branching beta-1%2C6-N-acetylglucosaminyltransferase family protein~ unknown_gene~ fragment;original_location=join(4119048..4119293%2C4119490..4120134);owner=coffea | |
| 65357 chr11 manual_curation exon 27223373 27223849 . - . Parent=GSCOCT00032666001 | |
| 65358 chr11 manual_curation exon 27222532 27223176 . - . Parent=GSCOCT00032666001 | |
| 65359 chr11 manual_curation CDS 27223373 27223618 . - 0 Parent=GSCOCT00032666001 | |
| 65360 chr11 manual_curation CDS 27222532 27223176 . - 0 Parent=GSCOCT00032666001 | |
| 65361 chr11 manual_curation gene 27224283 27234531 . - . ID=GSCOCG00032665001;Name=Cc11_g09830 | |
| 65362 chr11 manual_curation mRNA 27224283 27234531 . - . ID=GSCOCT00032665001;Parent=GSCOCG00032665001;Name=Cc11_g09830 | |
| 65363 chr11 manual_curation polypeptide 27224570 27234184 . - . ID=GSCOCP00032665001;Dbxref=InterPro:IPR001279,PFAM:PF00753,SMART:SM00849,SwissProt:Q0V9A9,SwissProt:Q5XGR8,SwissProt:Q9VLS9,TAIR:AT1G25375.1,TrEMBL:D7T920,TrEMBL:G7IC92,TrEMBL:I1NFL6;Derives_from=GSCOCT00032665001;Name=Cc11_g09830;Ontology_term=CC_evidence_code:ISS,GO:0016787,CC_EC_number:missing_EC_number,PRODUCT:Putative Beta-lactamase-like protein 2,CC_functional_completeness:modules,CC_gene:CG12375,CC_gene:lactb2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032665001~ Putative Beta-lactamase-like protein 2~ CG12375~ modules;original_location=join(4108482..4108760%2C4109243..4109390%2C4110002..4110156%2C4110408..4110590%2C4111343..4111418%2C4111995..4112072%2C4112676..4112761%2C4114844..4114917%2C4115140..4115185%2C4116022..4116131%2C4116379..4116553%2C4117905..4118096);owner=coffea | |
| 65364 chr11 manual_curation exon 27233906 27234531 . - . Parent=GSCOCT00032665001 | |
| 65365 chr11 manual_curation exon 27233276 27233423 . - . Parent=GSCOCT00032665001 | |
| 65366 chr11 manual_curation exon 27232510 27232664 . - . Parent=GSCOCT00032665001 | |
| 65367 chr11 manual_curation exon 27232076 27232258 . - . Parent=GSCOCT00032665001 | |
| 65368 chr11 manual_curation exon 27231248 27231323 . - . Parent=GSCOCT00032665001 | |
| 65369 chr11 manual_curation exon 27230594 27230671 . - . Parent=GSCOCT00032665001 | |
| 65370 chr11 manual_curation exon 27229905 27229990 . - . Parent=GSCOCT00032665001 | |
| 65371 chr11 manual_curation exon 27227749 27227822 . - . Parent=GSCOCT00032665001 | |
| 65372 chr11 manual_curation exon 27227481 27227526 . - . Parent=GSCOCT00032665001 | |
| 65373 chr11 manual_curation exon 27226535 27226644 . - . Parent=GSCOCT00032665001 | |
| 65374 chr11 manual_curation exon 27226113 27226287 . - . Parent=GSCOCT00032665001 | |
| 65375 chr11 manual_curation exon 27224283 27224761 . - . Parent=GSCOCT00032665001 | |
| 65376 chr11 manual_curation CDS 27233906 27234184 . - 0 Parent=GSCOCT00032665001 | |
| 65377 chr11 manual_curation CDS 27233276 27233423 . - 0 Parent=GSCOCT00032665001 | |
| 65378 chr11 manual_curation CDS 27232510 27232664 . - 1 Parent=GSCOCT00032665001 | |
| 65379 chr11 manual_curation CDS 27232076 27232258 . - 0 Parent=GSCOCT00032665001 | |
| 65380 chr11 manual_curation CDS 27231248 27231323 . - 0 Parent=GSCOCT00032665001 | |
| 65381 chr11 manual_curation CDS 27230594 27230671 . - 1 Parent=GSCOCT00032665001 | |
| 65382 chr11 manual_curation CDS 27229905 27229990 . - 1 Parent=GSCOCT00032665001 | |
| 65383 chr11 manual_curation CDS 27227749 27227822 . - 0 Parent=GSCOCT00032665001 | |
| 65384 chr11 manual_curation CDS 27227481 27227526 . - 2 Parent=GSCOCT00032665001 | |
| 65385 chr11 manual_curation CDS 27226535 27226644 . - 0 Parent=GSCOCT00032665001 | |
| 65386 chr11 manual_curation CDS 27226113 27226287 . - 2 Parent=GSCOCT00032665001 | |
| 65387 chr11 manual_curation CDS 27224570 27224761 . - 0 Parent=GSCOCT00032665001 | |
| 65388 chr11 manual_curation gene 27235037 27240517 . - . ID=GSCOCG00032664001;Name=Cc11_g09840 | |
| 65389 chr11 manual_curation mRNA 27235037 27240517 . - . ID=GSCOCT00032664001;Parent=GSCOCG00032664001;Name=Cc11_g09840 | |
| 65390 chr11 manual_curation polypeptide 27235382 27240257 . - . ID=GSCOCP00032664001;Dbxref=GENE3D:G3DSA:3.20.20.70,HAMAP:MF_00131,InterPro:IPR002028,InterPro:IPR011060,InterPro:IPR013785,InterPro:IPR018204,PFAM:PF00290,PROSITE:PS00167,SUPERFAMILY:SSF51366,SwissProt:B7JUK2,SwissProt:P42390,SwissProt:Q8KX32,TAIR:AT3G54640.1,TAIR:AT4G02610.1,TIGRFAMs:TIGR00262,TrEMBL:A5AI98,TrEMBL:B6SCD1,TrEMBL:F6GXL4;Derives_from=GSCOCT00032664001;Name=Cc11_g09840;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004834,GO:0006568,GO:0008152,CC_EC_number:4.2.1.20,PRODUCT:Indole-3-glycerol phosphate lyase%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:BX1,CC_gene:trpA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032664001~ Indole-3-glycerol phosphate lyase%2C chloroplastic~ BX1~ fragment;original_location=join(4102409..4102480%2C4103071..4103217%2C4103311..4103376%2C4103936..4104044%2C4105172..4105248%2C4105578..4105655%2C4106643..4106720%2C4107004..4107063%2C4107153..4107284);owner=coffea | |
| 65391 chr11 manual_curation exon 27240186 27240517 . - . Parent=GSCOCT00032664001 | |
| 65392 chr11 manual_curation exon 27239449 27239595 . - . Parent=GSCOCT00032664001 | |
| 65393 chr11 manual_curation exon 27239290 27239355 . - . Parent=GSCOCT00032664001 | |
| 65394 chr11 manual_curation exon 27238622 27238730 . - . Parent=GSCOCT00032664001 | |
| 65395 chr11 manual_curation exon 27237418 27237494 . - . Parent=GSCOCT00032664001 | |
| 65396 chr11 manual_curation exon 27237011 27237088 . - . Parent=GSCOCT00032664001 | |
| 65397 chr11 manual_curation exon 27235946 27236023 . - . Parent=GSCOCT00032664001 | |
| 65398 chr11 manual_curation exon 27235603 27235662 . - . Parent=GSCOCT00032664001 | |
| 65399 chr11 manual_curation exon 27235037 27235513 . - . Parent=GSCOCT00032664001 | |
| 65400 chr11 manual_curation CDS 27240186 27240257 . - 0 Parent=GSCOCT00032664001 | |
| 65401 chr11 manual_curation CDS 27239449 27239595 . - 0 Parent=GSCOCT00032664001 | |
| 65402 chr11 manual_curation CDS 27239290 27239355 . - 0 Parent=GSCOCT00032664001 | |
| 65403 chr11 manual_curation CDS 27238622 27238730 . - 0 Parent=GSCOCT00032664001 | |
| 65404 chr11 manual_curation CDS 27237418 27237494 . - 1 Parent=GSCOCT00032664001 | |
| 65405 chr11 manual_curation CDS 27237011 27237088 . - 0 Parent=GSCOCT00032664001 | |
| 65406 chr11 manual_curation CDS 27235946 27236023 . - 0 Parent=GSCOCT00032664001 | |
| 65407 chr11 manual_curation CDS 27235603 27235662 . - 0 Parent=GSCOCT00032664001 | |
| 65408 chr11 manual_curation CDS 27235382 27235513 . - 0 Parent=GSCOCT00032664001 | |
| 65409 chr11 manual_curation gene 27243963 27254638 . + . ID=GSCOCG00032663001;Name=Cc11_g09850 | |
| 65410 chr11 manual_curation mRNA 27243963 27254638 . + . ID=GSCOCT00032663001;Parent=GSCOCG00032663001;Name=Cc11_g09850 | |
| 65411 chr11 manual_curation polypeptide 27244146 27253610 . + . ID=GSCOCP00032663001;Dbxref=InterPro:IPR001841,InterPro:IPR008913,InterPro:IPR012312,InterPro:IPR017921,PFAM:PF01814,PFAM:PF05495,PROFILE:PS50089,PROFILE:PS51266,PROFILE:PS51270,SMART:SM00184,SwissProt:O14099,SwissProt:Q96PM5,SwissProt:Q9CR50,TAIR:AT1G18910.1,TAIR:AT1G74770.1,TAIR:AT3G18290.1,TrEMBL:B9SLY6,TrEMBL:E0D6T7,TrEMBL:F6HFM8;Derives_from=GSCOCT00032663001;Name=Cc11_g09850;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative RING finger and CHY zinc finger domain-containing protein 1,CC_functional_completeness:modules,CC_gene:SPAC2F3.16,CC_gene:RCHY1,CC_gene:Rchy1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032663001~ Putative RING finger and CHY zinc finger domain-containing protein 1~ SPAC2F3.16~ modules;original_location=complement(join(4098200..4098520%2C4095725..4095934%2C4094568..4094762%2C4094160..4094488%2C4093613..4093838%2C4093257..4093425%2C4091931..4093157%2C4091577..4091748%2C4091279..4091500%2C4091072..4091209%2C4090104..4090338%2C4089937..4089996%2C4089421..4089492%2C4089056..4089187));owner=coffea | |
| 65412 chr11 manual_curation exon 27253479 27254638 . + . Parent=GSCOCT00032663001 | |
| 65413 chr11 manual_curation exon 27253174 27253245 . + . Parent=GSCOCT00032663001 | |
| 65414 chr11 manual_curation exon 27252670 27252729 . + . Parent=GSCOCT00032663001 | |
| 65415 chr11 manual_curation exon 27252328 27252562 . + . Parent=GSCOCT00032663001 | |
| 65416 chr11 manual_curation exon 27251457 27251594 . + . Parent=GSCOCT00032663001 | |
| 65417 chr11 manual_curation exon 27251166 27251387 . + . Parent=GSCOCT00032663001 | |
| 65418 chr11 manual_curation exon 27250918 27251089 . + . Parent=GSCOCT00032663001 | |
| 65419 chr11 manual_curation exon 27249509 27250735 . + . Parent=GSCOCT00032663001 | |
| 65420 chr11 manual_curation exon 27249241 27249409 . + . Parent=GSCOCT00032663001 | |
| 65421 chr11 manual_curation exon 27248828 27249053 . + . Parent=GSCOCT00032663001 | |
| 65422 chr11 manual_curation exon 27248178 27248506 . + . Parent=GSCOCT00032663001 | |
| 65423 chr11 manual_curation exon 27247904 27248098 . + . Parent=GSCOCT00032663001 | |
| 65424 chr11 manual_curation exon 27246732 27246941 . + . Parent=GSCOCT00032663001 | |
| 65425 chr11 manual_curation exon 27243963 27244466 . + . Parent=GSCOCT00032663001 | |
| 65426 chr11 manual_curation CDS 27253479 27253610 . + 0 Parent=GSCOCT00032663001 | |
| 65427 chr11 manual_curation CDS 27253174 27253245 . + 0 Parent=GSCOCT00032663001 | |
| 65428 chr11 manual_curation CDS 27252670 27252729 . + 0 Parent=GSCOCT00032663001 | |
| 65429 chr11 manual_curation CDS 27252328 27252562 . + 2 Parent=GSCOCT00032663001 | |
| 65430 chr11 manual_curation CDS 27251457 27251594 . + 2 Parent=GSCOCT00032663001 | |
| 65431 chr11 manual_curation CDS 27251166 27251387 . + 2 Parent=GSCOCT00032663001 | |
| 65432 chr11 manual_curation CDS 27250918 27251089 . + 1 Parent=GSCOCT00032663001 | |
| 65433 chr11 manual_curation CDS 27249509 27250735 . + 1 Parent=GSCOCT00032663001 | |
| 65434 chr11 manual_curation CDS 27249241 27249409 . + 0 Parent=GSCOCT00032663001 | |
| 65435 chr11 manual_curation CDS 27248828 27249053 . + 2 Parent=GSCOCT00032663001 | |
| 65436 chr11 manual_curation CDS 27248178 27248506 . + 0 Parent=GSCOCT00032663001 | |
| 65437 chr11 manual_curation CDS 27247904 27248098 . + 0 Parent=GSCOCT00032663001 | |
| 65438 chr11 manual_curation CDS 27246732 27246941 . + 0 Parent=GSCOCT00032663001 | |
| 65439 chr11 manual_curation CDS 27244146 27244466 . + 0 Parent=GSCOCT00032663001 | |
| 65440 chr11 manual_curation gene 27256931 27257456 . + . ID=GSCOCG00032662001;Name=Cc11_g09860 | |
| 65441 chr11 manual_curation mRNA 27256931 27257456 . + . ID=GSCOCT00032662001;Parent=GSCOCG00032662001;Name=Cc11_g09860 | |
| 65442 chr11 manual_curation polypeptide 27256931 27257456 . + . ID=GSCOCP00032662001;Derives_from=GSCOCT00032662001;Name=Cc11_g09860;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032662001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(4085708..4085735%2C4085505..4085596%2C4085363..4085392%2C4085210..4085251));owner=coffea | |
| 65443 chr11 manual_curation exon 27257415 27257456 . + . Parent=GSCOCT00032662001 | |
| 65444 chr11 manual_curation exon 27257274 27257303 . + . Parent=GSCOCT00032662001 | |
| 65445 chr11 manual_curation exon 27257070 27257161 . + . Parent=GSCOCT00032662001 | |
| 65446 chr11 manual_curation exon 27256931 27256958 . + . Parent=GSCOCT00032662001 | |
| 65447 chr11 manual_curation CDS 27257415 27257456 . + 0 Parent=GSCOCT00032662001 | |
| 65448 chr11 manual_curation CDS 27257274 27257303 . + 0 Parent=GSCOCT00032662001 | |
| 65449 chr11 manual_curation CDS 27257070 27257161 . + 1 Parent=GSCOCT00032662001 | |
| 65450 chr11 manual_curation CDS 27256931 27256958 . + 0 Parent=GSCOCT00032662001 | |
| 65451 chr11 manual_curation gene 27257539 27264977 . + . ID=GSCOCG00032661001;Name=Cc11_g09870 | |
| 65452 chr11 manual_curation mRNA 27257539 27264977 . + . ID=GSCOCT00032661001;Parent=GSCOCG00032661001;Name=Cc11_g09870 | |
| 65453 chr11 manual_curation polypeptide 27257539 27264496 . + . ID=GSCOCP00032661001;Dbxref=GENE3D:G3DSA:1.10.287.110,InterPro:IPR001623,InterPro:IPR003095,InterPro:IPR015609,InterPro:IPR018253,PANTHER:PTHR11821,PFAM:PF00226,PRINTS:PR00625,PROFILE:PS50076,PROSITE:PS00636,SMART:SM00271,SUPERFAMILY:SSF46565,SwissProt:Q6XL73,SwissProt:Q8VXV4,SwissProt:Q9ZSY2,TAIR:AT1G24120.1,TAIR:AT1G59980.1,TAIR:AT1G68370.1,TrEMBL:A5BMV4,TrEMBL:D7KWB3,TrEMBL:Q1H5A8;Derives_from=GSCOCT00032661001;Name=Cc11_g09870;Ontology_term=CC_evidence_code:ISS,GO:0006457,GO:0031072,GO:0051082,CC_EC_number:missing_EC_number,PRODUCT:Chaperone protein dnaJ 15,CC_functional_completeness:complete,CC_gene:ATJ15,CC_gene:ATJ16,CC_gene:ATJ39;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032661001~ Chaperone protein dnaJ 15~ ATJ15~ complete;original_location=complement(join(4085000..4085127%2C4084279..4084402%2C4082484..4082566%2C4082290..4082401%2C4082109..4082213%2C4081945..4081995%2C4079284..4079373%2C4079088..4079196%2C4078808..4078956%2C4078664..4078717%2C4078170..4078403));owner=coffea | |
| 65454 chr11 manual_curation exon 27264263 27264977 . + . Parent=GSCOCT00032661001 | |
| 65455 chr11 manual_curation exon 27263949 27264002 . + . Parent=GSCOCT00032661001 | |
| 65456 chr11 manual_curation exon 27263710 27263858 . + . Parent=GSCOCT00032661001 | |
| 65457 chr11 manual_curation exon 27263470 27263578 . + . Parent=GSCOCT00032661001 | |
| 65458 chr11 manual_curation exon 27263293 27263382 . + . Parent=GSCOCT00032661001 | |
| 65459 chr11 manual_curation exon 27260671 27260721 . + . Parent=GSCOCT00032661001 | |
| 65460 chr11 manual_curation exon 27260453 27260557 . + . Parent=GSCOCT00032661001 | |
| 65461 chr11 manual_curation exon 27260265 27260376 . + . Parent=GSCOCT00032661001 | |
| 65462 chr11 manual_curation exon 27260100 27260182 . + . Parent=GSCOCT00032661001 | |
| 65463 chr11 manual_curation exon 27258264 27258387 . + . Parent=GSCOCT00032661001 | |
| 65464 chr11 manual_curation exon 27257539 27257666 . + . Parent=GSCOCT00032661001 | |
| 65465 chr11 manual_curation CDS 27264263 27264496 . + 0 Parent=GSCOCT00032661001 | |
| 65466 chr11 manual_curation CDS 27263949 27264002 . + 0 Parent=GSCOCT00032661001 | |
| 65467 chr11 manual_curation CDS 27263710 27263858 . + 1 Parent=GSCOCT00032661001 | |
| 65468 chr11 manual_curation CDS 27263470 27263578 . + 0 Parent=GSCOCT00032661001 | |
| 65469 chr11 manual_curation CDS 27263293 27263382 . + 0 Parent=GSCOCT00032661001 | |
| 65470 chr11 manual_curation CDS 27260671 27260721 . + 0 Parent=GSCOCT00032661001 | |
| 65471 chr11 manual_curation CDS 27260453 27260557 . + 0 Parent=GSCOCT00032661001 | |
| 65472 chr11 manual_curation CDS 27260265 27260376 . + 2 Parent=GSCOCT00032661001 | |
| 65473 chr11 manual_curation CDS 27260100 27260182 . + 0 Parent=GSCOCT00032661001 | |
| 65474 chr11 manual_curation CDS 27258264 27258387 . + 2 Parent=GSCOCT00032661001 | |
| 65475 chr11 manual_curation CDS 27257539 27257666 . + 0 Parent=GSCOCT00032661001 | |
| 65476 chr11 manual_curation gene 27276421 27277252 . + . ID=GSCOCG00032659001;Name=Cc11_g09880 | |
| 65477 chr11 manual_curation mRNA 27276421 27277252 . + . ID=GSCOCT00032659001;Parent=GSCOCG00032659001;Name=Cc11_g09880 | |
| 65478 chr11 manual_curation polypeptide 27276421 27277083 . + . ID=GSCOCP00032659001;Dbxref=InterPro:IPR007087,PROFILE:PS50157,PROSITE:PS00028,SwissProt:Q39265,TAIR:AT1G67030.1,TAIR:AT1G68360.1,TAIR:AT5G06650.1,TrEMBL:A5BMV3,TrEMBL:B9HJ48,TrEMBL:B9HWF8;Derives_from=GSCOCT00032659001;Name=Cc11_g09880;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative Zinc finger protein 6,CC_functional_completeness:complete,CC_gene:ZFP6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032659001~ Putative Zinc finger protein 6~ ZFP6~ complete;original_location=complement(4065583..4066245);owner=coffea | |
| 65479 chr11 manual_curation exon 27276421 27277252 . + . Parent=GSCOCT00032659001 | |
| 65480 chr11 manual_curation CDS 27276421 27277083 . + 0 Parent=GSCOCT00032659001 | |
| 65481 chr11 manual_curation gene 27284829 27291812 . - . ID=GSCOCG00032657001;Name=Cc11_g09890 | |
| 65482 chr11 manual_curation mRNA 27284829 27291812 . - . ID=GSCOCT00032657001;Parent=GSCOCG00032657001;Name=Cc11_g09890 | |
| 65483 chr11 manual_curation polypeptide 27285105 27291537 . - . ID=GSCOCP00032657001;Dbxref=GENE3D:G3DSA:3.40.50.620,InterPro:IPR002308,InterPro:IPR014729,InterPro:IPR015803,InterPro:IPR015804,PANTHER:PTHR10890,PFAM:PF01406,PRINTS:PR00983,SwissProt:A1AK01,SwissProt:B3E1P0,SwissProt:Q3A8C9,TAIR:AT2G31170.1,TAIR:AT3G56300.1,TAIR:AT5G38830.1,TIGRFAMs:TIGR00435,TrEMBL:B9T553,TrEMBL:D7T0D3,TrEMBL:D7TUC2;Derives_from=GSCOCT00032657001;Name=Cc11_g09890;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0004817,GO:0005524,GO:0005737,GO:0006412,GO:0006423,CC_EC_number:6.1.1.16,PRODUCT:Putative Cysteine--tRNA ligase,CC_functional_completeness:complete,CC_gene:cysS;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032657001~ Putative Cysteine--tRNA ligase~ cysS~ complete;original_location=join(4051129..4051349%2C4052272..4052335%2C4053811..4053972%2C4055618..4055788%2C4056041..4056322%2C4056407..4056532%2C4056804..4057022%2C4057102..4057239%2C4057325..4057561);owner=coffea | |
| 65484 chr11 manual_curation exon 27291317 27291812 . - . Parent=GSCOCT00032657001 | |
| 65485 chr11 manual_curation exon 27290331 27290394 . - . Parent=GSCOCT00032657001 | |
| 65486 chr11 manual_curation exon 27288694 27288855 . - . Parent=GSCOCT00032657001 | |
| 65487 chr11 manual_curation exon 27286878 27287048 . - . Parent=GSCOCT00032657001 | |
| 65488 chr11 manual_curation exon 27286344 27286625 . - . Parent=GSCOCT00032657001 | |
| 65489 chr11 manual_curation exon 27286134 27286259 . - . Parent=GSCOCT00032657001 | |
| 65490 chr11 manual_curation exon 27285644 27285862 . - . Parent=GSCOCT00032657001 | |
| 65491 chr11 manual_curation exon 27285427 27285564 . - . Parent=GSCOCT00032657001 | |
| 65492 chr11 manual_curation exon 27284829 27285341 . - . Parent=GSCOCT00032657001 | |
| 65493 chr11 manual_curation CDS 27291317 27291537 . - 0 Parent=GSCOCT00032657001 | |
| 65494 chr11 manual_curation CDS 27290331 27290394 . - 2 Parent=GSCOCT00032657001 | |
| 65495 chr11 manual_curation CDS 27288694 27288855 . - 0 Parent=GSCOCT00032657001 | |
| 65496 chr11 manual_curation CDS 27286878 27287048 . - 0 Parent=GSCOCT00032657001 | |
| 65497 chr11 manual_curation CDS 27286344 27286625 . - 0 Parent=GSCOCT00032657001 | |
| 65498 chr11 manual_curation CDS 27286134 27286259 . - 0 Parent=GSCOCT00032657001 | |
| 65499 chr11 manual_curation CDS 27285644 27285862 . - 0 Parent=GSCOCT00032657001 | |
| 65500 chr11 manual_curation CDS 27285427 27285564 . - 0 Parent=GSCOCT00032657001 | |
| 65501 chr11 manual_curation CDS 27285105 27285341 . - 0 Parent=GSCOCT00032657001 | |
| 65502 chr11 manual_curation gene 27302435 27303701 . + . ID=GSCOCG00032654001;Name=Cc11_g09900 | |
| 65503 chr11 manual_curation mRNA 27302435 27303701 . + . ID=GSCOCT00032654001;Parent=GSCOCG00032654001;Name=Cc11_g09900 | |
| 65504 chr11 manual_curation polypeptide 27302435 27303701 . + . ID=GSCOCP00032654001;Dbxref=InterPro:IPR012438,PFAM:PF07797,TAIR:AT1G25370.1,TAIR:AT1G68340.1,TAIR:AT3G60410.1,TrEMBL:A5BMV1,TrEMBL:B9HJ46,TrEMBL:F6HFN3;Derives_from=GSCOCT00032654001;Name=Cc11_g09900;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of unknown function (DUF1639),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032654001~ Putative Protein of unknown function (DUF1639)~ unknown_gene~ complete;original_location=complement(join(4039920..4040231%2C4039185..4039784%2C4038965..4039033));owner=coffea | |
| 65505 chr11 manual_curation exon 27303633 27303701 . + . Parent=GSCOCT00032654001 | |
| 65506 chr11 manual_curation exon 27302882 27303481 . + . Parent=GSCOCT00032654001 | |
| 65507 chr11 manual_curation exon 27302435 27302746 . + . Parent=GSCOCT00032654001 | |
| 65508 chr11 manual_curation CDS 27303633 27303701 . + 0 Parent=GSCOCT00032654001 | |
| 65509 chr11 manual_curation CDS 27302882 27303481 . + 0 Parent=GSCOCT00032654001 | |
| 65510 chr11 manual_curation CDS 27302435 27302746 . + 0 Parent=GSCOCT00032654001 | |
| 65511 chr11 manual_curation gene 27308762 27308995 . - . ID=GSCOCG00032653001;Name=Cc11_g09910 | |
| 65512 chr11 manual_curation mRNA 27308762 27308995 . - . ID=GSCOCT00032653001;Parent=GSCOCG00032653001;Name=Cc11_g09910 | |
| 65513 chr11 manual_curation polypeptide 27308762 27308995 . - . ID=GSCOCP00032653001;Derives_from=GSCOCT00032653001;Name=Cc11_g09910;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032653001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=4033671..4033904;owner=coffea | |
| 65514 chr11 manual_curation exon 27308762 27308995 . - . Parent=GSCOCT00032653001 | |
| 65515 chr11 manual_curation CDS 27308762 27308995 . - 0 Parent=GSCOCT00032653001 | |
| 65516 chr11 manual_curation gene 27323528 27334207 . + . ID=GSCOCG00032650001;Name=Cc11_g09920 | |
| 65517 chr11 manual_curation mRNA 27323528 27334207 . + . ID=GSCOCT00032650001;Parent=GSCOCG00032650001;Name=Cc11_g09920 | |
| 65518 chr11 manual_curation polypeptide 27323725 27333827 . + . ID=GSCOCP00032650001;Dbxref=GENE3D:G3DSA:1.10.1160.10,GENE3D:G3DSA:2.40.240.10,InterPro:IPR000924,InterPro:IPR001412,InterPro:IPR004514,InterPro:IPR007638,InterPro:IPR007639,InterPro:IPR011035,InterPro:IPR020056,InterPro:IPR020058,InterPro:IPR020059,InterPro:IPR020060,InterPro:IPR020061,PANTHER:PTHR10119,PANTHER:PTHR10119:SF3,PFAM:PF00749,PFAM:PF03950,PFAM:PF04557,PFAM:PF04558,PRINTS:PR00987,PROSITE:PS00178,SUPERFAMILY:SSF50715,SwissProt:P14325,SwissProt:P52780,SwissProt:Q9Y105,TAIR:AT1G25350.2,TAIR:AT5G19720.1,TAIR:AT5G26710.1,TIGRFAMs:TIGR00440,TrEMBL:B9SLX3,TrEMBL:D7SM09,TrEMBL:D7T929;Derives_from=GSCOCT00032650001;Name=Cc11_g09920;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0004812,GO:0004819,GO:0005524,GO:0005737,GO:0006412,GO:0006418,GO:0006425,GO:0043039,CC_EC_number:6.1.1.18,PRODUCT:Glutamine--tRNA ligase,CC_functional_completeness:complete,CC_gene:glnS,CC_gene:Aats-gln;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032650001~ Glutamine--tRNA ligase~ glnS~ complete;original_location=complement(join(4018786..4018941%2C4017828..4017878%2C4017452..4017523%2C4016988..4017087%2C4016075..4016170%2C4015091..4015152%2C4014856..4014951%2C4014673..4014768%2C4014058..4014210%2C4013912..4013967%2C4013282..4013372%2C4013124..4013210%2C4012723..4012926%2C4012470..4012568%2C4011462..4011593%2C4011174..4011310%2C4010974..4011073%2C4010763..4010852%2C4010481..4010581%2C4010268..4010373%2C4010088..4010177%2C4009870..4009999%2C4008839..4008933));owner=coffea | |
| 65519 chr11 manual_curation exon 27333733 27334207 . + . Parent=GSCOCT00032650001 | |
| 65520 chr11 manual_curation exon 27332667 27332796 . + . Parent=GSCOCT00032650001 | |
| 65521 chr11 manual_curation exon 27332489 27332578 . + . Parent=GSCOCT00032650001 | |
| 65522 chr11 manual_curation exon 27332293 27332398 . + . Parent=GSCOCT00032650001 | |
| 65523 chr11 manual_curation exon 27332085 27332185 . + . Parent=GSCOCT00032650001 | |
| 65524 chr11 manual_curation exon 27331814 27331903 . + . Parent=GSCOCT00032650001 | |
| 65525 chr11 manual_curation exon 27331593 27331692 . + . Parent=GSCOCT00032650001 | |
| 65526 chr11 manual_curation exon 27331356 27331492 . + . Parent=GSCOCT00032650001 | |
| 65527 chr11 manual_curation exon 27331073 27331204 . + . Parent=GSCOCT00032650001 | |
| 65528 chr11 manual_curation exon 27330098 27330196 . + . Parent=GSCOCT00032650001 | |
| 65529 chr11 manual_curation exon 27329740 27329943 . + . Parent=GSCOCT00032650001 | |
| 65530 chr11 manual_curation exon 27329456 27329542 . + . Parent=GSCOCT00032650001 | |
| 65531 chr11 manual_curation exon 27329294 27329384 . + . Parent=GSCOCT00032650001 | |
| 65532 chr11 manual_curation exon 27328699 27328754 . + . Parent=GSCOCT00032650001 | |
| 65533 chr11 manual_curation exon 27328456 27328608 . + . Parent=GSCOCT00032650001 | |
| 65534 chr11 manual_curation exon 27327898 27327993 . + . Parent=GSCOCT00032650001 | |
| 65535 chr11 manual_curation exon 27327715 27327810 . + . Parent=GSCOCT00032650001 | |
| 65536 chr11 manual_curation exon 27327514 27327575 . + . Parent=GSCOCT00032650001 | |
| 65537 chr11 manual_curation exon 27326496 27326591 . + . Parent=GSCOCT00032650001 | |
| 65538 chr11 manual_curation exon 27325579 27325678 . + . Parent=GSCOCT00032650001 | |
| 65539 chr11 manual_curation exon 27325143 27325214 . + . Parent=GSCOCT00032650001 | |
| 65540 chr11 manual_curation exon 27324788 27324838 . + . Parent=GSCOCT00032650001 | |
| 65541 chr11 manual_curation exon 27323528 27323880 . + . Parent=GSCOCT00032650001 | |
| 65542 chr11 manual_curation CDS 27333733 27333827 . + 1 Parent=GSCOCT00032650001 | |
| 65543 chr11 manual_curation CDS 27332667 27332796 . + 0 Parent=GSCOCT00032650001 | |
| 65544 chr11 manual_curation CDS 27332489 27332578 . + 0 Parent=GSCOCT00032650001 | |
| 65545 chr11 manual_curation CDS 27332293 27332398 . + 2 Parent=GSCOCT00032650001 | |
| 65546 chr11 manual_curation CDS 27332085 27332185 . + 0 Parent=GSCOCT00032650001 | |
| 65547 chr11 manual_curation CDS 27331814 27331903 . + 0 Parent=GSCOCT00032650001 | |
| 65548 chr11 manual_curation CDS 27331593 27331692 . + 2 Parent=GSCOCT00032650001 | |
| 65549 chr11 manual_curation CDS 27331356 27331492 . + 0 Parent=GSCOCT00032650001 | |
| 65550 chr11 manual_curation CDS 27331073 27331204 . + 0 Parent=GSCOCT00032650001 | |
| 65551 chr11 manual_curation CDS 27330098 27330196 . + 0 Parent=GSCOCT00032650001 | |
| 65552 chr11 manual_curation CDS 27329740 27329943 . + 0 Parent=GSCOCT00032650001 | |
| 65553 chr11 manual_curation CDS 27329456 27329542 . + 0 Parent=GSCOCT00032650001 | |
| 65554 chr11 manual_curation CDS 27329294 27329384 . + 2 Parent=GSCOCT00032650001 | |
| 65555 chr11 manual_curation CDS 27328699 27328754 . + 0 Parent=GSCOCT00032650001 | |
| 65556 chr11 manual_curation CDS 27328456 27328608 . + 0 Parent=GSCOCT00032650001 | |
| 65557 chr11 manual_curation CDS 27327898 27327993 . + 0 Parent=GSCOCT00032650001 | |
| 65558 chr11 manual_curation CDS 27327715 27327810 . + 0 Parent=GSCOCT00032650001 | |
| 65559 chr11 manual_curation CDS 27327514 27327575 . + 1 Parent=GSCOCT00032650001 | |
| 65560 chr11 manual_curation CDS 27326496 27326591 . + 1 Parent=GSCOCT00032650001 | |
| 65561 chr11 manual_curation CDS 27325579 27325678 . + 0 Parent=GSCOCT00032650001 | |
| 65562 chr11 manual_curation CDS 27325143 27325214 . + 0 Parent=GSCOCT00032650001 | |
| 65563 chr11 manual_curation CDS 27324788 27324838 . + 0 Parent=GSCOCT00032650001 | |
| 65564 chr11 manual_curation CDS 27323725 27323880 . + 0 Parent=GSCOCT00032650001 | |
| 65565 chr11 manual_curation gene 27340506 27342411 . - . ID=GSCOCG00032649001;Name=Cc11_g09930 | |
| 65566 chr11 manual_curation mRNA 27340506 27342411 . - . ID=GSCOCT00032649001;Parent=GSCOCG00032649001;Name=Cc11_g09930 | |
| 65567 chr11 manual_curation polypeptide 27340738 27341987 . - . ID=GSCOCP00032649001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001005,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR014778,InterPro:IPR015495,InterPro:IPR017930,PANTHER:PTHR10641,PFAM:PF00249,PROFILE:PS51294,SMART:SM00717,SUPERFAMILY:SSF46689,SwissProt:P81391,SwissProt:P81396,SwissProt:Q9LK95,TAIR:AT1G25340.1,TAIR:AT1G48000.1,TAIR:AT1G68320.1,TrEMBL:B9HJ43,TrEMBL:G7ICA5,TrEMBL:Q9C9G7;Derives_from=GSCOCT00032649001;Name=Cc11_g09930;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:myb domain protein 62,CC_functional_completeness:complete,CC_gene:MYB21,CC_gene:MYB305,CC_gene:MYB340;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032649001~ myb domain protein 62~ MYB21~ complete;original_location=join(4000679..4000847%2C4000989..4001118%2C4001268..4001589%2C4001671..4001718%2C4001749..4001928);owner=coffea | |
| 65568 chr11 manual_curation exon 27341819 27342411 . - . Parent=GSCOCT00032649001 | |
| 65569 chr11 manual_curation exon 27341548 27341677 . - . Parent=GSCOCT00032649001 | |
| 65570 chr11 manual_curation exon 27341077 27341398 . - . Parent=GSCOCT00032649001 | |
| 65571 chr11 manual_curation exon 27340948 27340995 . - . Parent=GSCOCT00032649001 | |
| 65572 chr11 manual_curation exon 27340506 27340917 . - . Parent=GSCOCT00032649001 | |
| 65573 chr11 manual_curation CDS 27341819 27341987 . - 0 Parent=GSCOCT00032649001 | |
| 65574 chr11 manual_curation CDS 27341548 27341677 . - 1 Parent=GSCOCT00032649001 | |
| 65575 chr11 manual_curation CDS 27341077 27341398 . - 2 Parent=GSCOCT00032649001 | |
| 65576 chr11 manual_curation CDS 27340948 27340995 . - 0 Parent=GSCOCT00032649001 | |
| 65577 chr11 manual_curation CDS 27340738 27340917 . - 0 Parent=GSCOCT00032649001 | |
| 65578 chr11 manual_curation gene 27352537 27354283 . + . ID=GSCOCG00032648001;Name=Cc11_g09940 | |
| 65579 chr11 manual_curation mRNA 27352537 27354283 . + . ID=GSCOCT00032648001;Parent=GSCOCG00032648001;Name=Cc11_g09940 | |
| 65580 chr11 manual_curation polypeptide 27352537 27354283 . + . ID=GSCOCP00032648001;Dbxref=GENE3D:G3DSA:4.10.280.10,InterPro:IPR001092,InterPro:IPR011598,PFAM:PF00010,PROFILE:PS50888,SMART:SM00353,SUPERFAMILY:SSF47459,SwissProt:A4D998,SwissProt:Q8GWK7,SwissProt:Q8GZ13,TAIR:AT1G18400.1,TAIR:AT1G25330.1,TAIR:AT1G73830.1,TrEMBL:A5B5L7,TrEMBL:B9T1P0,TrEMBL:F6HFN6;Derives_from=GSCOCT00032648001;Name=Cc11_g09940;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0030528,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:BHLH75,CC_gene:BEE3,CC_gene:BEE1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032648001~ Hypothetical protein~ BHLH75~ missing_functional_completeness;original_location=complement(join(3989776..3990129%2C3989520..3989639%2C3989212..3989277%2C3988918..3988986%2C3988717..3988819%2C3988383..3988456));owner=coffea | |
| 65581 chr11 manual_curation exon 27354210 27354283 . + . Parent=GSCOCT00032648001 | |
| 65582 chr11 manual_curation exon 27353847 27353949 . + . Parent=GSCOCT00032648001 | |
| 65583 chr11 manual_curation exon 27353680 27353748 . + . Parent=GSCOCT00032648001 | |
| 65584 chr11 manual_curation exon 27353389 27353454 . + . Parent=GSCOCT00032648001 | |
| 65585 chr11 manual_curation exon 27353027 27353146 . + . Parent=GSCOCT00032648001 | |
| 65586 chr11 manual_curation exon 27352537 27352890 . + . Parent=GSCOCT00032648001 | |
| 65587 chr11 manual_curation CDS 27354210 27354283 . + 1 Parent=GSCOCT00032648001 | |
| 65588 chr11 manual_curation CDS 27353847 27353949 . + 0 Parent=GSCOCT00032648001 | |
| 65589 chr11 manual_curation CDS 27353680 27353748 . + 0 Parent=GSCOCT00032648001 | |
| 65590 chr11 manual_curation CDS 27353389 27353454 . + 0 Parent=GSCOCT00032648001 | |
| 65591 chr11 manual_curation CDS 27353027 27353146 . + 0 Parent=GSCOCT00032648001 | |
| 65592 chr11 manual_curation CDS 27352537 27352890 . + 0 Parent=GSCOCT00032648001 | |
| 65593 chr11 manual_curation gene 27358175 27361401 . + . ID=GSCOCG00032647001;Name=Cc11_g09950 | |
| 65594 chr11 manual_curation mRNA 27358175 27361401 . + . ID=GSCOCT00032647001;Parent=GSCOCG00032647001;Name=Cc11_g09950 | |
| 65595 chr11 manual_curation polypeptide 27358239 27361172 . + . ID=GSCOCP00032647001;Dbxref=InterPro:IPR006683,PFAM:PF03061,TAIR:AT1G35290.1,TAIR:AT1G68260.1,TAIR:AT1G68280.1,TrEMBL:B9SLW9,TrEMBL:E0YCS8,TrEMBL:F6HFN7;Derives_from=GSCOCT00032647001;Name=Cc11_g09950;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Thioesterase superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032647001~ Thioesterase superfamily protein~ unknown_gene~ complete;original_location=complement(join(3984240..3984427%2C3983474..3983574%2C3982302..3982411%2C3981692..3981787%2C3981494..3981613));owner=coffea | |
| 65596 chr11 manual_curation exon 27361053 27361401 . + . Parent=GSCOCT00032647001 | |
| 65597 chr11 manual_curation exon 27360879 27360974 . + . Parent=GSCOCT00032647001 | |
| 65598 chr11 manual_curation exon 27360255 27360364 . + . Parent=GSCOCT00032647001 | |
| 65599 chr11 manual_curation exon 27359092 27359192 . + . Parent=GSCOCT00032647001 | |
| 65600 chr11 manual_curation exon 27358175 27358426 . + . Parent=GSCOCT00032647001 | |
| 65601 chr11 manual_curation CDS 27361053 27361172 . + 0 Parent=GSCOCT00032647001 | |
| 65602 chr11 manual_curation CDS 27360879 27360974 . + 0 Parent=GSCOCT00032647001 | |
| 65603 chr11 manual_curation CDS 27360255 27360364 . + 1 Parent=GSCOCT00032647001 | |
| 65604 chr11 manual_curation CDS 27359092 27359192 . + 2 Parent=GSCOCT00032647001 | |
| 65605 chr11 manual_curation CDS 27358239 27358426 . + 0 Parent=GSCOCT00032647001 | |
| 65606 chr11 manual_curation gene 27361514 27363620 . - . ID=GSCOCG00032646001;Name=Cc11_g09960 | |
| 65607 chr11 manual_curation mRNA 27361514 27363620 . - . ID=GSCOCT00032646001;Parent=GSCOCG00032646001;Name=Cc11_g09960 | |
| 65608 chr11 manual_curation polypeptide 27362122 27363027 . - . ID=GSCOCP00032646001;Dbxref=InterPro:IPR012442,PFAM:PF07816,TAIR:AT1G67050.1,TAIR:AT1G68330.1,TAIR:AT3G18300.1,TrEMBL:B9HJ45,TrEMBL:B9HWG2,TrEMBL:I1LEV3;Derives_from=GSCOCT00032646001;Name=Cc11_g09960;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032646001~ Putative unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48780.1)%3B Has 155 Blast hits to 147 proteins in 23 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 19%3B Fungi - 3%3B Plants - 126%3B Viruses - 0%3B Other Eukaryotes - 7 (source: NCBI BLink).~ unknown_gene~ complete;original_location=3979639..3980544;owner=coffea | |
| 65609 chr11 manual_curation exon 27361514 27363620 . - . Parent=GSCOCT00032646001 | |
| 65610 chr11 manual_curation CDS 27362122 27363027 . - 0 Parent=GSCOCT00032646001 | |
| 65611 chr11 manual_curation gene 27366021 27368551 . + . ID=GSCOCG00032645001;Name=Cc11_g09970 | |
| 65612 chr11 manual_curation mRNA 27366021 27368551 . + . ID=GSCOCT00032645001;Parent=GSCOCG00032645001;Name=Cc11_g09970 | |
| 65613 chr11 manual_curation polypeptide 27366313 27368091 . + . ID=GSCOCP00032645001;Dbxref=GENE3D:G3DSA:3.40.50.620,InterPro:IPR006015,InterPro:IPR006016,InterPro:IPR014729,PFAM:PF00582,PRINTS:PR01438,SwissProt:Q8LGG8,TAIR:AT1G09740.1,TAIR:AT1G68300.1,TAIR:AT3G58450.1,TrEMBL:B9HJ41,TrEMBL:B9HWG5,TrEMBL:F6HEV9;Derives_from=GSCOCT00032645001;Name=Cc11_g09970;Ontology_term=CC_evidence_code:ISS,GO:0006950,CC_EC_number:missing_EC_number,PRODUCT:Putative Universal stress protein A-like protein,CC_functional_completeness:complete,CC_gene:At3g01520;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032645001~ Putative Universal stress protein A-like protein~ At3g01520~ complete;original_location=complement(join(3976197..3976353%2C3975254..3975345%2C3974905..3975023%2C3974575..3974653));owner=coffea | |
| 65614 chr11 manual_curation exon 27368013 27368551 . + . Parent=GSCOCT00032645001 | |
| 65615 chr11 manual_curation exon 27367643 27367761 . + . Parent=GSCOCT00032645001 | |
| 65616 chr11 manual_curation exon 27367321 27367412 . + . Parent=GSCOCT00032645001 | |
| 65617 chr11 manual_curation exon 27366021 27366469 . + . Parent=GSCOCT00032645001 | |
| 65618 chr11 manual_curation CDS 27368013 27368091 . + 2 Parent=GSCOCT00032645001 | |
| 65619 chr11 manual_curation CDS 27367643 27367761 . + 0 Parent=GSCOCT00032645001 | |
| 65620 chr11 manual_curation CDS 27367321 27367412 . + 1 Parent=GSCOCT00032645001 | |
| 65621 chr11 manual_curation CDS 27366313 27366469 . + 0 Parent=GSCOCT00032645001 | |
| 65622 chr11 manual_curation gene 27370250 27372115 . + . ID=GSCOCG00032644001;Name=Cc11_g09980 | |
| 65623 chr11 manual_curation mRNA 27370250 27372115 . + . ID=GSCOCT00032644001;Parent=GSCOCG00032644001;Name=Cc11_g09980 | |
| 65624 chr11 manual_curation polypeptide 27370250 27372115 . + . ID=GSCOCP00032644001;Dbxref=GENE3D:G3DSA:3.40.50.620,InterPro:IPR006015,InterPro:IPR006016,InterPro:IPR014729,PFAM:PF00582,PRINTS:PR01438,SwissProt:Q8LGG8,TAIR:AT1G68300.1,TAIR:AT3G11930.3,TAIR:AT3G58450.1,TrEMBL:B9HWG5,TrEMBL:B9SLW8,TrEMBL:F6HEV9;Derives_from=GSCOCT00032644001;Name=Cc11_g09980;Ontology_term=CC_evidence_code:ISS,GO:0006950,CC_EC_number:missing_EC_number,PRODUCT:Putative Universal stress protein A-like protein,CC_functional_completeness:fragment,CC_gene:At3g01520;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032644001~ Putative Universal stress protein A-like protein~ At3g01520~ fragment;original_location=complement(join(3972269..3972416%2C3972109..3972163%2C3971382..3971532%2C3970958..3971079%2C3970551..3970626));owner=coffea | |
| 65625 chr11 manual_curation exon 27372040 27372115 . + . Parent=GSCOCT00032644001 | |
| 65626 chr11 manual_curation exon 27371587 27371708 . + . Parent=GSCOCT00032644001 | |
| 65627 chr11 manual_curation exon 27371134 27371284 . + . Parent=GSCOCT00032644001 | |
| 65628 chr11 manual_curation exon 27370503 27370557 . + . Parent=GSCOCT00032644001 | |
| 65629 chr11 manual_curation exon 27370250 27370397 . + . Parent=GSCOCT00032644001 | |
| 65630 chr11 manual_curation CDS 27372040 27372115 . + 2 Parent=GSCOCT00032644001 | |
| 65631 chr11 manual_curation CDS 27371587 27371708 . + 0 Parent=GSCOCT00032644001 | |
| 65632 chr11 manual_curation CDS 27371134 27371284 . + 2 Parent=GSCOCT00032644001 | |
| 65633 chr11 manual_curation CDS 27370503 27370557 . + 1 Parent=GSCOCT00032644001 | |
| 65634 chr11 manual_curation CDS 27370250 27370397 . + 0 Parent=GSCOCT00032644001 | |
| 65635 chr11 manual_curation gene 27376791 27379098 . + . ID=GSCOCG00032642001;Name=Cc11_g09990 | |
| 65636 chr11 manual_curation mRNA 27376791 27379098 . + . ID=GSCOCT00032642001;Parent=GSCOCG00032642001;Name=Cc11_g09990 | |
| 65637 chr11 manual_curation polypeptide 27376946 27378753 . + . ID=GSCOCP00032642001;Dbxref=GENE3D:G3DSA:3.40.50.620,InterPro:IPR006015,InterPro:IPR006016,InterPro:IPR014729,PFAM:PF00582,PRINTS:PR01438,SwissProt:Q8LGG8,TAIR:AT1G09740.1,TAIR:AT1G68300.1,TAIR:AT3G62550.1,TrEMBL:B9HWG7,TrEMBL:B9SLW7,TrEMBL:F6HEW0;Derives_from=GSCOCT00032642001;Name=Cc11_g09990;Ontology_term=CC_evidence_code:ISS,GO:0006950,CC_EC_number:missing_EC_number,PRODUCT:Putative Universal stress protein A-like protein,CC_functional_completeness:complete,CC_gene:At3g01520;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032642001~ Putative Universal stress protein A-like protein~ At3g01520~ complete;original_location=complement(join(3965498..3965720%2C3965119..3965210%2C3964508..3964626%2C3963913..3963991));owner=coffea | |
| 65638 chr11 manual_curation exon 27378675 27379098 . + . Parent=GSCOCT00032642001 | |
| 65639 chr11 manual_curation exon 27378040 27378158 . + . Parent=GSCOCT00032642001 | |
| 65640 chr11 manual_curation exon 27377456 27377547 . + . Parent=GSCOCT00032642001 | |
| 65641 chr11 manual_curation exon 27376791 27377168 . + . Parent=GSCOCT00032642001 | |
| 65642 chr11 manual_curation CDS 27378675 27378753 . + 2 Parent=GSCOCT00032642001 | |
| 65643 chr11 manual_curation CDS 27378040 27378158 . + 0 Parent=GSCOCT00032642001 | |
| 65644 chr11 manual_curation CDS 27377456 27377547 . + 1 Parent=GSCOCT00032642001 | |
| 65645 chr11 manual_curation CDS 27376946 27377168 . + 0 Parent=GSCOCT00032642001 | |
| 65646 chr11 manual_curation gene 27379216 27381349 . - . ID=GSCOCG00032641001;Name=Cc11_g10000 | |
| 65647 chr11 manual_curation mRNA 27379216 27381349 . - . ID=GSCOCT00032641001;Parent=GSCOCG00032641001;Name=Cc11_g10000 | |
| 65648 chr11 manual_curation polypeptide 27379216 27381349 . - . ID=GSCOCP00032641001;Dbxref=GENE3D:G3DSA:1.10.575.10,InterPro:IPR003154,InterPro:IPR008947,PFAM:PF02265,SUPERFAMILY:SSF48537,SwissProt:F4JJL0,SwissProt:Q9C9G4,SwissProt:Q9SXA6,TAIR:AT1G11190.1,TAIR:AT1G68290.1,TAIR:AT4G21585.1,TrEMBL:D7T937,TrEMBL:I1NFK4,TrEMBL:Q9ZR88;Derives_from=GSCOCT00032641001;Name=Cc11_g10000;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0004519,GO:0006308,CC_EC_number:3.1.30.1,PRODUCT:Endonuclease 2,CC_functional_completeness:complete,CC_gene:ENDO2,CC_gene:ENDO4,CC_gene:ENDO1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032641001~ Endonuclease 2~ ENDO2~ complete;original_location=join(3961317..3961430%2C3961528..3961702%2C3962116..3962220%2C3962393..3962448%2C3962594..3962677%2C3962761..3962853%2C3962946..3963013%2C3963167..3963240%2C3963356..3963450);owner=coffea | |
| 65649 chr11 manual_curation exon 27381236 27381349 . - . Parent=GSCOCT00032641001 | |
| 65650 chr11 manual_curation exon 27380964 27381138 . - . Parent=GSCOCT00032641001 | |
| 65651 chr11 manual_curation exon 27380446 27380550 . - . Parent=GSCOCT00032641001 | |
| 65652 chr11 manual_curation exon 27380218 27380273 . - . Parent=GSCOCT00032641001 | |
| 65653 chr11 manual_curation exon 27379989 27380072 . - . Parent=GSCOCT00032641001 | |
| 65654 chr11 manual_curation exon 27379813 27379905 . - . Parent=GSCOCT00032641001 | |
| 65655 chr11 manual_curation exon 27379653 27379720 . - . Parent=GSCOCT00032641001 | |
| 65656 chr11 manual_curation exon 27379426 27379499 . - . Parent=GSCOCT00032641001 | |
| 65657 chr11 manual_curation exon 27379216 27379310 . - . Parent=GSCOCT00032641001 | |
| 65658 chr11 manual_curation CDS 27381236 27381349 . - 0 Parent=GSCOCT00032641001 | |
| 65659 chr11 manual_curation CDS 27380964 27381138 . - 0 Parent=GSCOCT00032641001 | |
| 65660 chr11 manual_curation CDS 27380446 27380550 . - 1 Parent=GSCOCT00032641001 | |
| 65661 chr11 manual_curation CDS 27380218 27380273 . - 1 Parent=GSCOCT00032641001 | |
| 65662 chr11 manual_curation CDS 27379989 27380072 . - 0 Parent=GSCOCT00032641001 | |
| 65663 chr11 manual_curation CDS 27379813 27379905 . - 0 Parent=GSCOCT00032641001 | |
| 65664 chr11 manual_curation CDS 27379653 27379720 . - 0 Parent=GSCOCT00032641001 | |
| 65665 chr11 manual_curation CDS 27379426 27379499 . - 2 Parent=GSCOCT00032641001 | |
| 65666 chr11 manual_curation CDS 27379216 27379310 . - 1 Parent=GSCOCT00032641001 | |
| 65667 chr11 manual_curation gene 27386490 27387770 . + . ID=GSCOCG00032640001;Name=Cc11_g10010 | |
| 65668 chr11 manual_curation mRNA 27386490 27387770 . + . ID=GSCOCT00032640001;Parent=GSCOCG00032640001;Name=Cc11_g10010 | |
| 65669 chr11 manual_curation polypeptide 27386757 27387770 . + . ID=GSCOCP00032640001;Dbxref=TAIR:AT1G25400.1,TAIR:AT1G68440.1,TrEMBL:B9HWG9,TrEMBL:F6HEW1,TrEMBL:I1KWU6;Derives_from=GSCOCT00032640001;Name=Cc11_g10010;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032640001~ Putative unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G25400.2)%3B Has 86 Blast hits to 86 proteins in 29 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 27%3B Fungi - 11%3B Plants - 24%3B Viruses - 0%3B Other Eukaryotes - 18 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(3954896..3955909);owner=coffea | |
| 65670 chr11 manual_curation exon 27386490 27387770 . + . Parent=GSCOCT00032640001 | |
| 65671 chr11 manual_curation CDS 27386757 27387770 . + 0 Parent=GSCOCT00032640001 | |
| 65672 chr11 manual_curation gene 27396981 27397592 . - . ID=GSCOCG00032638001;Name=Cc11_g10020 | |
| 65673 chr11 manual_curation mRNA 27396981 27397592 . - . ID=GSCOCT00032638001;Parent=GSCOCG00032638001;Name=Cc11_g10020 | |
| 65674 chr11 manual_curation polypeptide 27396981 27397592 . - . ID=GSCOCP00032638001;Dbxref=InterPro:IPR008889,PFAM:PF05678,TAIR:AT1G21326.1,TAIR:AT1G68450.1,TAIR:AT3G18360.1,TrEMBL:A5AJM8,TrEMBL:B9HWH0,TrEMBL:F6HEW2;Derives_from=GSCOCT00032638001;Name=Cc11_g10020;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative VQ motif-containing protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032638001~ Putative VQ motif-containing protein~ unknown_gene~ complete;original_location=3945074..3945685;owner=coffea | |
| 65675 chr11 manual_curation exon 27396981 27397592 . - . Parent=GSCOCT00032638001 | |
| 65676 chr11 manual_curation CDS 27396981 27397592 . - 0 Parent=GSCOCT00032638001 | |
| 65677 chr11 manual_curation gene 27409317 27410581 . - . ID=GSCOCG00032636001;Name=Cc11_g10030 | |
| 65678 chr11 manual_curation mRNA 27409317 27410581 . - . ID=GSCOCT00032636001;Parent=GSCOCG00032636001;Name=Cc11_g10030 | |
| 65679 chr11 manual_curation polypeptide 27409700 27410581 . - . ID=GSCOCP00032636001;Dbxref=InterPro:IPR002627,PANTHER:PTHR11088,PFAM:PF01715,SwissProt:Q5GHF7,SwissProt:Q94ID3,SwissProt:Q9C6L1,TAIR:AT1G25410.1,TAIR:AT1G68460.1,TAIR:AT3G19160.1,TrEMBL:A5AJM9,TrEMBL:F6HEW3,TrEMBL:Q1W5W5;Derives_from=GSCOCT00032636001;Name=Cc11_g10030;Ontology_term=CC_evidence_code:ISS,GO:0004811,GO:0005524,GO:0008033,CC_EC_number:2.5.1.8,PRODUCT:Adenylate isopentenyltransferase,CC_functional_completeness:complete,CC_gene:IPT1,CC_gene:IPT6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032636001~ Adenylate isopentenyltransferase~ IPT1~ complete;original_location=3932085..3932966;owner=coffea | |
| 65680 chr11 manual_curation exon 27409317 27410581 . - . Parent=GSCOCT00032636001 | |
| 65681 chr11 manual_curation CDS 27409700 27410581 . - 0 Parent=GSCOCT00032636001 | |
| 65682 chr11 manual_curation gene 27431355 27432398 . + . ID=GSCOCG00032634001;Name=Cc11_g10040 | |
| 65683 chr11 manual_curation mRNA 27431355 27432398 . + . ID=GSCOCT00032634001;Parent=GSCOCG00032634001;Name=Cc11_g10040 | |
| 65684 chr11 manual_curation polypeptide 27431355 27432398 . + . ID=GSCOCP00032634001;Dbxref=InterPro:IPR004883,PFAM:PF03195,PROFILE:PS50891,SwissProt:O64836,SwissProt:P59467,SwissProt:P59468,TAIR:AT2G23660.1,TAIR:AT3G26620.1,TAIR:AT3G26660.1,TrEMBL:B9I4F9,TrEMBL:B9ID10,TrEMBL:D7TMW8;Derives_from=GSCOCT00032634001;Name=Cc11_g10040;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:LOB domain-containing protein 24,CC_functional_completeness:modules,CC_gene:LBD24,CC_gene:LBD23,CC_gene:LBD10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032634001~ LOB domain-containing protein 24~ LBD24~ modules;original_location=complement(join(3911159..3911311%2C3910268..3910579));owner=coffea | |
| 65685 chr11 manual_curation exon 27432087 27432398 . + . Parent=GSCOCT00032634001 | |
| 65686 chr11 manual_curation exon 27431355 27431507 . + . Parent=GSCOCT00032634001 | |
| 65687 chr11 manual_curation CDS 27432087 27432398 . + 0 Parent=GSCOCT00032634001 | |
| 65688 chr11 manual_curation CDS 27431355 27431507 . + 0 Parent=GSCOCT00032634001 | |
| 65689 chr11 manual_curation gene 27446380 27450469 . + . ID=GSCOCG00032632001;Name=Cc11_g10050 | |
| 65690 chr11 manual_curation mRNA 27446380 27450469 . + . ID=GSCOCT00032632001;Parent=GSCOCG00032632001;Name=Cc11_g10050 | |
| 65691 chr11 manual_curation polypeptide 27446465 27450469 . + . ID=GSCOCP00032632001;Dbxref=InterPro:IPR000073,InterPro:IPR022742,PFAM:PF12146,PRINTS:PR00111,SwissProt:O35678,SwissProt:Q8R431,SwissProt:Q99685,TAIR:AT1G11090.1,TAIR:AT1G77420.1,TAIR:AT5G16120.2,TrEMBL:C6TJJ2,TrEMBL:D7T940,TrEMBL:I1NFJ7;Derives_from=GSCOCT00032632001;Name=Cc11_g10050;Ontology_term=CC_evidence_code:ISS,CC_EC_number:3.1.1.23,PRODUCT:Putative Monoglyceride lipase,CC_functional_completeness:modules,CC_gene:Mgll,CC_gene:MGLL;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032632001~ Putative Monoglyceride lipase~ Mgll~ modules;original_location=complement(join(3895911..3896201%2C3895742..3895771%2C3895233..3895362%2C3894965..3895111%2C3894561..3894691%2C3893590..3893727%2C3892547..3892645%2C3892197..3892418));owner=coffea | |
| 65692 chr11 manual_curation exon 27450248 27450469 . + . Parent=GSCOCT00032632001 | |
| 65693 chr11 manual_curation exon 27450021 27450119 . + . Parent=GSCOCT00032632001 | |
| 65694 chr11 manual_curation exon 27448939 27449076 . + . Parent=GSCOCT00032632001 | |
| 65695 chr11 manual_curation exon 27447975 27448105 . + . Parent=GSCOCT00032632001 | |
| 65696 chr11 manual_curation exon 27447555 27447701 . + . Parent=GSCOCT00032632001 | |
| 65697 chr11 manual_curation exon 27447304 27447433 . + . Parent=GSCOCT00032632001 | |
| 65698 chr11 manual_curation exon 27446895 27446924 . + . Parent=GSCOCT00032632001 | |
| 65699 chr11 manual_curation exon 27446380 27446755 . + . Parent=GSCOCT00032632001 | |
| 65700 chr11 manual_curation CDS 27450248 27450469 . + 0 Parent=GSCOCT00032632001 | |
| 65701 chr11 manual_curation CDS 27450021 27450119 . + 0 Parent=GSCOCT00032632001 | |
| 65702 chr11 manual_curation CDS 27448939 27449076 . + 0 Parent=GSCOCT00032632001 | |
| 65703 chr11 manual_curation CDS 27447975 27448105 . + 1 Parent=GSCOCT00032632001 | |
| 65704 chr11 manual_curation CDS 27447555 27447701 . + 1 Parent=GSCOCT00032632001 | |
| 65705 chr11 manual_curation CDS 27447304 27447433 . + 0 Parent=GSCOCT00032632001 | |
| 65706 chr11 manual_curation CDS 27446895 27446924 . + 0 Parent=GSCOCT00032632001 | |
| 65707 chr11 manual_curation CDS 27446465 27446755 . + 0 Parent=GSCOCT00032632001 | |
| 65708 chr11 manual_curation gene 27452045 27456002 . + . ID=GSCOCG00032630001;Name=Cc11_g10060 | |
| 65709 chr11 manual_curation mRNA 27452045 27456002 . + . ID=GSCOCT00032630001;Parent=GSCOCG00032630001;Name=Cc11_g10060 | |
| 65710 chr11 manual_curation polypeptide 27452153 27455507 . + . ID=GSCOCP00032630001;Dbxref=InterPro:IPR005061,PFAM:PF03398,SwissProt:P53990,SwissProt:Q3ZBV1,SwissProt:Q568Z6,TAIR:AT1G25420.1,TAIR:AT1G34220.1,TAIR:AT4G35730.1,TrEMBL:A9PE92,TrEMBL:B9T6V1,TrEMBL:D7T941;Derives_from=GSCOCT00032630001;Name=Cc11_g10060;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Regulator of Vps4 activity in the MVB pathway protein,CC_functional_completeness:complete,CC_gene:IST1,CC_gene:Ist1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032630001~ Regulator of Vps4 activity in the MVB pathway protein~ IST1~ complete;original_location=complement(join(3890464..3890513%2C3889807..3889939%2C3889607..3889710%2C3888969..3889140%2C3888732..3888872%2C3887159..3887518));owner=coffea | |
| 65711 chr11 manual_curation exon 27455148 27456002 . + . Parent=GSCOCT00032630001 | |
| 65712 chr11 manual_curation exon 27453794 27453934 . + . Parent=GSCOCT00032630001 | |
| 65713 chr11 manual_curation exon 27453526 27453697 . + . Parent=GSCOCT00032630001 | |
| 65714 chr11 manual_curation exon 27452956 27453059 . + . Parent=GSCOCT00032630001 | |
| 65715 chr11 manual_curation exon 27452727 27452859 . + . Parent=GSCOCT00032630001 | |
| 65716 chr11 manual_curation exon 27452045 27452202 . + . Parent=GSCOCT00032630001 | |
| 65717 chr11 manual_curation CDS 27455148 27455507 . + 0 Parent=GSCOCT00032630001 | |
| 65718 chr11 manual_curation CDS 27453794 27453934 . + 0 Parent=GSCOCT00032630001 | |
| 65719 chr11 manual_curation CDS 27453526 27453697 . + 2 Parent=GSCOCT00032630001 | |
| 65720 chr11 manual_curation CDS 27452956 27453059 . + 0 Parent=GSCOCT00032630001 | |
| 65721 chr11 manual_curation CDS 27452727 27452859 . + 2 Parent=GSCOCT00032630001 | |
| 65722 chr11 manual_curation CDS 27452153 27452202 . + 0 Parent=GSCOCT00032630001 | |
| 65723 chr11 manual_curation gene 27463852 27466476 . - . ID=GSCOCG00032629001;Name=Cc11_g10070 | |
| 65724 chr11 manual_curation mRNA 27463852 27466476 . - . ID=GSCOCT00032629001;Parent=GSCOCG00032629001;Name=Cc11_g10070 | |
| 65725 chr11 manual_curation polypeptide 27463852 27466476 . - . ID=GSCOCP00032629001;Dbxref=InterPro:IPR007087,PROFILE:PS50157,PROSITE:PS00028,SwissProt:Q6S591,SwissProt:Q6S592,SwissProt:Q9LG97,TAIR:AT1G13400.1,TAIR:AT1G68480.1,TrEMBL:B9HWH2,TrEMBL:C6ES39,TrEMBL:F6HEW5;Derives_from=GSCOCT00032629001;Name=Cc11_g10070;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:JAG,CC_gene:SL1,CC_gene:JGL;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032629001~ Putative uncharacterized protein~ JAG~ complete;original_location=join(3876190..3876210%2C3876351..3876397%2C3876558..3876667%2C3877212..3877350%2C3877720..3877815%2C3878250..3878512%2C3878633..3878814);owner=coffea | |
| 65726 chr11 manual_curation exon 27466456 27466476 . - . Parent=GSCOCT00032629001 | |
| 65727 chr11 manual_curation exon 27466269 27466315 . - . Parent=GSCOCT00032629001 | |
| 65728 chr11 manual_curation exon 27465999 27466108 . - . Parent=GSCOCT00032629001 | |
| 65729 chr11 manual_curation exon 27465316 27465454 . - . Parent=GSCOCT00032629001 | |
| 65730 chr11 manual_curation exon 27464851 27464946 . - . Parent=GSCOCT00032629001 | |
| 65731 chr11 manual_curation exon 27464154 27464416 . - . Parent=GSCOCT00032629001 | |
| 65732 chr11 manual_curation exon 27463852 27464033 . - . Parent=GSCOCT00032629001 | |
| 65733 chr11 manual_curation CDS 27466456 27466476 . - 0 Parent=GSCOCT00032629001 | |
| 65734 chr11 manual_curation CDS 27466269 27466315 . - 0 Parent=GSCOCT00032629001 | |
| 65735 chr11 manual_curation CDS 27465999 27466108 . - 2 Parent=GSCOCT00032629001 | |
| 65736 chr11 manual_curation CDS 27465316 27465454 . - 1 Parent=GSCOCT00032629001 | |
| 65737 chr11 manual_curation CDS 27464851 27464946 . - 2 Parent=GSCOCT00032629001 | |
| 65738 chr11 manual_curation CDS 27464154 27464416 . - 2 Parent=GSCOCT00032629001 | |
| 65739 chr11 manual_curation CDS 27463852 27464033 . - 1 Parent=GSCOCT00032629001 | |
| 65740 chr11 manual_curation gene 27471543 27472102 . + . ID=GSCOCG00032627001;Name=Cc11_g10080 | |
| 65741 chr11 manual_curation mRNA 27471543 27472102 . + . ID=GSCOCT00032627001;Parent=GSCOCG00032627001;Name=Cc11_g10080 | |
| 65742 chr11 manual_curation polypeptide 27471543 27472102 . + . ID=GSCOCP00032627001;Dbxref=InterPro:IPR000620,PFAM:PF00892,SwissProt:Q6J163,TAIR:AT3G30340.1,TAIR:AT4G01440.1,TAIR:AT4G30420.1,TrEMBL:B9GRT4,TrEMBL:F6HG96,TrEMBL:F6HG99;Derives_from=GSCOCT00032627001;Name=Cc11_g10080;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative Auxin-induced protein 5NG4,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032627001~ Putative Auxin-induced protein 5NG4~ unknown_gene~ fragment;original_location=complement(join(3871005..3871123%2C3870564..3870780));owner=coffea | |
| 65743 chr11 manual_curation exon 27471886 27472102 . + . Parent=GSCOCT00032627001 | |
| 65744 chr11 manual_curation exon 27471543 27471661 . + . Parent=GSCOCT00032627001 | |
| 65745 chr11 manual_curation CDS 27471886 27472102 . + 2 Parent=GSCOCT00032627001 | |
| 65746 chr11 manual_curation CDS 27471543 27471661 . + 0 Parent=GSCOCT00032627001 | |
| 65747 chr11 manual_curation gene 27473553 27475737 . + . ID=GSCOCG00032626001;Name=Cc11_g10090 | |
| 65748 chr11 manual_curation mRNA 27473553 27475737 . + . ID=GSCOCT00032626001;Parent=GSCOCG00032626001;Name=Cc11_g10090 | |
| 65749 chr11 manual_curation polypeptide 27473553 27475623 . + . ID=GSCOCP00032626001;Dbxref=InterPro:IPR000620,PFAM:PF00892,SwissProt:Q6J163,TAIR:AT3G30340.1,TAIR:AT4G01430.1,TAIR:AT4G01440.1,TrEMBL:F6HG96,TrEMBL:F6HUA7,TrEMBL:G7IBE3;Derives_from=GSCOCT00032626001;Name=Cc11_g10090;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative Auxin-induced protein 5NG4,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032626001~ Putative Auxin-induced protein 5NG4~ unknown_gene~ complete;original_location=complement(join(3868923..3869113%2C3868703..3868765%2C3868441..3868557%2C3867978..3868368%2C3867561..3867712%2C3867043..3867214));owner=coffea | |
| 65750 chr11 manual_curation exon 27475452 27475737 . + . Parent=GSCOCT00032626001 | |
| 65751 chr11 manual_curation exon 27474954 27475105 . + . Parent=GSCOCT00032626001 | |
| 65752 chr11 manual_curation exon 27474298 27474688 . + . Parent=GSCOCT00032626001 | |
| 65753 chr11 manual_curation exon 27474109 27474225 . + . Parent=GSCOCT00032626001 | |
| 65754 chr11 manual_curation exon 27473901 27473963 . + . Parent=GSCOCT00032626001 | |
| 65755 chr11 manual_curation exon 27473553 27473743 . + . Parent=GSCOCT00032626001 | |
| 65756 chr11 manual_curation CDS 27475452 27475623 . + 2 Parent=GSCOCT00032626001 | |
| 65757 chr11 manual_curation CDS 27474954 27475105 . + 0 Parent=GSCOCT00032626001 | |
| 65758 chr11 manual_curation CDS 27474298 27474688 . + 2 Parent=GSCOCT00032626001 | |
| 65759 chr11 manual_curation CDS 27474109 27474225 . + 2 Parent=GSCOCT00032626001 | |
| 65760 chr11 manual_curation CDS 27473901 27473963 . + 2 Parent=GSCOCT00032626001 | |
| 65761 chr11 manual_curation CDS 27473553 27473743 . + 0 Parent=GSCOCT00032626001 | |
| 65762 chr11 manual_curation gene 27487594 27491833 . + . ID=GSCOCG00032623001;Name=Cc11_g10100 | |
| 65763 chr11 manual_curation mRNA 27487594 27491833 . + . ID=GSCOCT00032623001;Parent=GSCOCG00032623001;Name=Cc11_g10100 | |
| 65764 chr11 manual_curation polypeptide 27487664 27491295 . + . ID=GSCOCP00032623001;Dbxref=InterPro:IPR001196,InterPro:IPR005749,InterPro:IPR021131,PANTHER:PTHR12934,PFAM:PF00828,PROSITE:PS00475,SUPERFAMILY:SSF52080,SwissProt:B7KI04,SwissProt:P25873,SwissProt:P31165,TAIR:AT3G25920.1,TIGRFAMs:TIGR01071,TrEMBL:C6SYC0,TrEMBL:D7LQW8,TrEMBL:D7T943;Derives_from=GSCOCT00032623001;Name=Cc11_g10100;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,GO:0015934,CC_EC_number:missing_EC_number,PRODUCT:50S ribosomal protein L15%2C chloroplastic,CC_functional_completeness:complete,CC_gene:RPL15,CC_gene:rplO;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032623001~ 50S ribosomal protein L15%2C chloroplastic~ RPL15~ complete;original_location=complement(join(3854919..3855002%2C3854382..3854760%2C3853268..3853419%2C3851371..3851592));owner=coffea | |
| 65765 chr11 manual_curation exon 27491074 27491833 . + . Parent=GSCOCT00032623001 | |
| 65766 chr11 manual_curation exon 27489247 27489398 . + . Parent=GSCOCT00032623001 | |
| 65767 chr11 manual_curation exon 27487906 27488284 . + . Parent=GSCOCT00032623001 | |
| 65768 chr11 manual_curation exon 27487594 27487747 . + . Parent=GSCOCT00032623001 | |
| 65769 chr11 manual_curation CDS 27491074 27491295 . + 0 Parent=GSCOCT00032623001 | |
| 65770 chr11 manual_curation CDS 27489247 27489398 . + 1 Parent=GSCOCT00032623001 | |
| 65771 chr11 manual_curation CDS 27487906 27488284 . + 0 Parent=GSCOCT00032623001 | |
| 65772 chr11 manual_curation CDS 27487664 27487747 . + 0 Parent=GSCOCT00032623001 | |
| 65773 chr11 manual_curation gene 27505374 27508465 . + . ID=GSCOCG00032622001;Name=Cc11_g10110 | |
| 65774 chr11 manual_curation mRNA 27505374 27508465 . + . ID=GSCOCT00032622001;Parent=GSCOCG00032622001;Name=Cc11_g10110 | |
| 65775 chr11 manual_curation polypeptide 27506345 27507349 . + . ID=GSCOCP00032622001;Dbxref=TAIR:AT1G13390.1,TAIR:AT1G68490.1,TAIR:AT5G16110.1,TrEMBL:A8TU70,TrEMBL:B9T053,TrEMBL:D7T944;Derives_from=GSCOCT00032622001;Name=Cc11_g10110;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032622001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13390.2)%3B Has 125 Blast hits to 125 proteins in 18 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 125%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(3836122..3836321%2C3835906..3835969%2C3835317..3835628));owner=coffea | |
| 65776 chr11 manual_curation exon 27507038 27508465 . + . Parent=GSCOCT00032622001 | |
| 65777 chr11 manual_curation exon 27506697 27506760 . + . Parent=GSCOCT00032622001 | |
| 65778 chr11 manual_curation exon 27505374 27506544 . + . Parent=GSCOCT00032622001 | |
| 65779 chr11 manual_curation CDS 27507038 27507349 . + 0 Parent=GSCOCT00032622001 | |
| 65780 chr11 manual_curation CDS 27506697 27506760 . + 2 Parent=GSCOCT00032622001 | |
| 65781 chr11 manual_curation CDS 27506345 27506544 . + 0 Parent=GSCOCT00032622001 | |
| 65782 chr11 manual_curation gene 27513705 27514079 . + . ID=GSCOCG00032621001;Name=Cc11_g10120 | |
| 65783 chr11 manual_curation mRNA 27513705 27514079 . + . ID=GSCOCT00032621001;Parent=GSCOCG00032621001;Name=Cc11_g10120 | |
| 65784 chr11 manual_curation polypeptide 27513705 27514079 . + . ID=GSCOCP00032621001;Dbxref=TrEMBL:B9HWH4,TrEMBL:B9T054,TrEMBL:F6HEW6;Derives_from=GSCOCT00032621001;Name=Cc11_g10120;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Predicted protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032621001~ Putative Predicted protein~ unknown_gene~ complete;original_location=complement(3828587..3828961);owner=coffea | |
| 65785 chr11 manual_curation exon 27513705 27514079 . + . Parent=GSCOCT00032621001 | |
| 65786 chr11 manual_curation CDS 27513705 27514079 . + 0 Parent=GSCOCT00032621001 | |
| 65787 chr11 manual_curation gene 27525348 27530615 . + . ID=GSCOCG00032620001;Name=Cc11_g10130 | |
| 65788 chr11 manual_curation mRNA 27525348 27530615 . + . ID=GSCOCT00032620001;Parent=GSCOCG00032620001;Name=Cc11_g10130 | |
| 65789 chr11 manual_curation polypeptide 27525480 27530615 . + . ID=GSCOCP00032620001;Dbxref=InterPro:IPR009606,PFAM:PF06749,TAIR:AT1G13380.1,TAIR:AT3G15480.1,TAIR:AT4G27435.1,TrEMBL:B7FFD1,TrEMBL:G3MGW5,TrEMBL:G7JX88;Derives_from=GSCOCT00032620001;Name=Cc11_g10130;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF1218),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032620001~ Protein of unknown function (DUF1218)~ unknown_gene~ complete;original_location=complement(join(3817088..3817186%2C3812698..3812903%2C3812051..3812315));owner=coffea | |
| 65790 chr11 manual_curation exon 27530351 27530615 . + . Parent=GSCOCT00032620001 | |
| 65791 chr11 manual_curation exon 27529763 27529968 . + . Parent=GSCOCT00032620001 | |
| 65792 chr11 manual_curation exon 27525348 27525578 . + . Parent=GSCOCT00032620001 | |
| 65793 chr11 manual_curation CDS 27530351 27530615 . + 2 Parent=GSCOCT00032620001 | |
| 65794 chr11 manual_curation CDS 27529763 27529968 . + 0 Parent=GSCOCT00032620001 | |
| 65795 chr11 manual_curation CDS 27525480 27525578 . + 0 Parent=GSCOCT00032620001 | |
| 65796 chr11 manual_curation gene 27547776 27548794 . + . ID=GSCOCG00032617001;Name=Cc11_g10140 | |
| 65797 chr11 manual_curation mRNA 27547776 27548794 . + . ID=GSCOCT00032617001;Parent=GSCOCG00032617001;Name=Cc11_g10140 | |
| 65798 chr11 manual_curation polypeptide 27547776 27548794 . + . ID=GSCOCP00032617001;Dbxref=InterPro:IPR004883,PFAM:PF03195,PROFILE:PS50891,SwissProt:Q9CA30,SwissProt:Q9M886,SwissProt:Q9ZW96,TAIR:AT1G67100.1,TAIR:AT1G68510.1,TAIR:AT3G02550.1,TrEMBL:A5BBT8,TrEMBL:F6GTL0,TrEMBL:F6HEW8;Derives_from=GSCOCT00032617001;Name=Cc11_g10140;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:LOB domain-containing protein 41,CC_functional_completeness:complete,CC_gene:LBD41,CC_gene:LBD40,CC_gene:LBD42;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032617001~ LOB domain-containing protein 41~ LBD41~ complete;original_location=complement(join(3794701..3794890%2C3793872..3794452));owner=coffea | |
| 65799 chr11 manual_curation exon 27548214 27548794 . + . Parent=GSCOCT00032617001 | |
| 65800 chr11 manual_curation exon 27547776 27547965 . + . Parent=GSCOCT00032617001 | |
| 65801 chr11 manual_curation CDS 27548214 27548794 . + 1 Parent=GSCOCT00032617001 | |
| 65802 chr11 manual_curation CDS 27547776 27547965 . + 0 Parent=GSCOCT00032617001 | |
| 65803 chr11 manual_curation gene 27558677 27561322 . - . ID=GSCOCG00032615001;Name=Cc11_g10150 | |
| 65804 chr11 manual_curation mRNA 27558677 27561322 . - . ID=GSCOCT00032615001;Parent=GSCOCG00032615001;Name=Cc11_g10150 | |
| 65805 chr11 manual_curation polypeptide 27559246 27561158 . - . ID=GSCOCP00032615001;Dbxref=InterPro:IPR000315,InterPro:IPR010402,PFAM:PF00643,PFAM:PF06203,PROFILE:PS50119,PROFILE:PS51017,SMART:SM00336,SwissProt:Q8LG76,SwissProt:Q8RWD0,SwissProt:Q9C9A9,TAIR:AT1G25440.1,TAIR:AT1G68520.1,TAIR:AT1G73870.1,TrEMBL:A9PFG3,TrEMBL:B9HWH7,TrEMBL:D7T949;Derives_from=GSCOCT00032615001;Name=Cc11_g10150;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative Zinc finger protein CONSTANS-LIKE 16,CC_functional_completeness:complete,CC_gene:COL16,CC_gene:COL6,CC_gene:COL7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032615001~ Putative Zinc finger protein CONSTANS-LIKE 16~ COL16~ complete;original_location=join(3781508..3782596%2C3783169..3783420);owner=coffea | |
| 65806 chr11 manual_curation exon 27560070 27561322 . - . Parent=GSCOCT00032615001 | |
| 65807 chr11 manual_curation exon 27558677 27559497 . - . Parent=GSCOCT00032615001 | |
| 65808 chr11 manual_curation CDS 27560070 27561158 . - 0 Parent=GSCOCT00032615001 | |
| 65809 chr11 manual_curation CDS 27559246 27559497 . - 0 Parent=GSCOCT00032615001 | |
| 65810 chr11 manual_curation gene 27570324 27574301 . + . ID=GSCOCG00032613001;Name=Cc11_g10160 | |
| 65811 chr11 manual_curation mRNA 27570324 27574301 . + . ID=GSCOCT00032613001;Parent=GSCOCG00032613001;Name=Cc11_g10160 | |
| 65812 chr11 manual_curation polypeptide 27573129 27574301 . + . ID=GSCOCP00032613001;Dbxref=TAIR:AT1G55170.1,TAIR:AT1G67170.1,TAIR:AT3G14750.1,TrEMBL:A5BGR7,TrEMBL:F6HEW9,TrEMBL:G7ZWG9;Derives_from=GSCOCT00032613001;Name=Cc11_g10160;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032613001~ Putative unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14750.1)%3B Has 13439 Blast hits to 8993 proteins in 828 species: Archae - 344%3B Bacteria - 1469%3B Metazoa - 6958%3B Fungi - 1008%3B Plants - 683%3B Viruses - 29%3B Other Eukaryotes - 2948 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(3769011..3769537%2C3768643..3768788%2C3768365..3768489));owner=coffea | |
| 65813 chr11 manual_curation exon 27570606 27570739 . + . Parent=GSCOCT00032613001 | |
| 65814 chr11 manual_curation exon 27570324 27570499 . + . Parent=GSCOCT00032613001 | |
| 65815 chr11 manual_curation exon 27574177 27574301 . + . Parent=GSCOCT00032613001 | |
| 65816 chr11 manual_curation exon 27573878 27574023 . + . Parent=GSCOCT00032613001 | |
| 65817 chr11 manual_curation exon 27573127 27573655 . + . Parent=GSCOCT00032613001 | |
| 65818 chr11 manual_curation CDS 27574177 27574301 . + 1 Parent=GSCOCT00032613001 | |
| 65819 chr11 manual_curation CDS 27573878 27574023 . + 2 Parent=GSCOCT00032613001 | |
| 65820 chr11 manual_curation CDS 27573129 27573655 . + 0 Parent=GSCOCT00032613001 | |
| 65821 chr11 manual_curation gene 27574539 27578219 . - . ID=GSCOCG00032612001;Name=Cc11_g10170 | |
| 65822 chr11 manual_curation mRNA 27574539 27578219 . - . ID=GSCOCT00032612001;Parent=GSCOCG00032612001;Name=Cc11_g10170 | |
| 65823 chr11 manual_curation polypeptide 27575420 27577799 . - . ID=GSCOCP00032612001;Dbxref=GENE3D:G3DSA:3.20.20.330,InterPro:IPR003726,PFAM:PF02574,PROFILE:PS50970,SUPERFAMILY:SSF82282,SwissProt:A4ZGQ8,SwissProt:Q9FUN0,SwissProt:Q9SDL7,TAIR:AT3G22740.1,TAIR:AT3G25900.1,TAIR:AT3G63250.1,TrEMBL:B9HWH8,TrEMBL:B9T060,TrEMBL:D7T951;Derives_from=GSCOCT00032612001;Name=Cc11_g10170;Ontology_term=CC_evidence_code:ISS,GO:0008898,CC_EC_number:2.1.1.10,PRODUCT:Homocysteine S-methyltransferase 1,CC_functional_completeness:complete,CC_gene:HMT1,CC_gene:HMT-1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032612001~ Homocysteine S-methyltransferase 1~ HMT1~ complete;original_location=join(3764867..3765037%2C3765389..3765445%2C3765799..3766004%2C3766130..3766259%2C3766584..3766787%2C3766900..3766971%2C3767103..3767246);owner=coffea | |
| 65824 chr11 manual_curation exon 27577629 27578219 . - . Parent=GSCOCT00032612001 | |
| 65825 chr11 manual_curation exon 27577221 27577277 . - . Parent=GSCOCT00032612001 | |
| 65826 chr11 manual_curation exon 27576662 27576867 . - . Parent=GSCOCT00032612001 | |
| 65827 chr11 manual_curation exon 27576407 27576536 . - . Parent=GSCOCT00032612001 | |
| 65828 chr11 manual_curation exon 27575879 27576082 . - . Parent=GSCOCT00032612001 | |
| 65829 chr11 manual_curation exon 27575695 27575766 . - . Parent=GSCOCT00032612001 | |
| 65830 chr11 manual_curation exon 27574539 27575563 . - . Parent=GSCOCT00032612001 | |
| 65831 chr11 manual_curation CDS 27577629 27577799 . - 0 Parent=GSCOCT00032612001 | |
| 65832 chr11 manual_curation CDS 27577221 27577277 . - 0 Parent=GSCOCT00032612001 | |
| 65833 chr11 manual_curation CDS 27576662 27576867 . - 0 Parent=GSCOCT00032612001 | |
| 65834 chr11 manual_curation CDS 27576407 27576536 . - 2 Parent=GSCOCT00032612001 | |
| 65835 chr11 manual_curation CDS 27575879 27576082 . - 0 Parent=GSCOCT00032612001 | |
| 65836 chr11 manual_curation CDS 27575695 27575766 . - 0 Parent=GSCOCT00032612001 | |
| 65837 chr11 manual_curation CDS 27575420 27575563 . - 0 Parent=GSCOCT00032612001 | |
| 65838 chr11 manual_curation gene 27582337 27583981 . - . ID=GSCOCG00032611001;Name=Cc11_g10180 | |
| 65839 chr11 manual_curation mRNA 27582337 27583981 . - . ID=GSCOCT00032611001;Parent=GSCOCG00032611001;Name=Cc11_g10180 | |
| 65840 chr11 manual_curation polypeptide 27582420 27583910 . - . ID=GSCOCP00032611001;Dbxref=GENE3D:G3DSA:3.40.47.10,InterPro:IPR012392,InterPro:IPR013601,InterPro:IPR013747,InterPro:IPR016038,InterPro:IPR016039,PFAM:PF08392,PFAM:PF08541,PIR:PIRSF036417,SUPERFAMILY:SSF53901,SwissProt:Q9C6L5,SwissProt:Q9LN49,SwissProt:Q9XF43,TAIR:AT1G19440.1,TAIR:AT1G25450.1,TAIR:AT1G68530.1,TrEMBL:A9PEC4,TrEMBL:I1E3D2,TrEMBL:I1NFI7;Derives_from=GSCOCT00032611001;Name=Cc11_g10180;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0006633,GO:0008152,GO:0008610,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:3-ketoacyl-CoA synthase 6,CC_functional_completeness:complete,CC_gene:CUT1,CC_gene:KCS5,CC_gene:KCS4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032611001~ 3-ketoacyl-CoA synthase 6~ CUT1~ complete;original_location=3758756..3760246;owner=coffea | |
| 65841 chr11 manual_curation exon 27582337 27583981 . - . Parent=GSCOCT00032611001 | |
| 65842 chr11 manual_curation CDS 27582420 27583910 . - 0 Parent=GSCOCT00032611001 | |
| 65843 chr11 manual_curation gene 27587960 27589438 . + . ID=GSCOCG00032610001;Name=Cc11_g10190 | |
| 65844 chr11 manual_curation mRNA 27587960 27589438 . + . ID=GSCOCT00032610001;Parent=GSCOCG00032610001;Name=Cc11_g10190 | |
| 65845 chr11 manual_curation polypeptide 27587960 27589438 . + . ID=GSCOCP00032610001;Dbxref=GENE3D:G3DSA:3.40.47.10,InterPro:IPR012392,InterPro:IPR013601,InterPro:IPR013747,InterPro:IPR016038,InterPro:IPR016039,PFAM:PF08392,PFAM:PF08541,PIR:PIRSF036417,SUPERFAMILY:SSF53901,SwissProt:Q9C6L5,SwissProt:Q9LN49,SwissProt:Q9XF43,TAIR:AT1G19440.1,TAIR:AT1G25450.1,TAIR:AT1G68530.1,TrEMBL:I1E3D2,TrEMBL:I1NFI7,TrEMBL:Q2QCW7;Derives_from=GSCOCT00032610001;Name=Cc11_g10190;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0006633,GO:0008152,GO:0008610,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:3-ketoacyl-CoA synthase 6,CC_functional_completeness:complete,CC_gene:CUT1,CC_gene:KCS5,CC_gene:KCS4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032610001~ 3-ketoacyl-CoA synthase 6~ CUT1~ complete;original_location=complement(3753228..3754706);owner=coffea | |
| 65846 chr11 manual_curation exon 27587960 27589438 . + . Parent=GSCOCT00032610001 | |
| 65847 chr11 manual_curation CDS 27587960 27589438 . + 0 Parent=GSCOCT00032610001 | |
| 65848 chr11 manual_curation gene 27598416 27601478 . + . ID=GSCOCG00032609001;Name=Cc11_g10200 | |
| 65849 chr11 manual_curation mRNA 27598416 27601478 . + . ID=GSCOCT00032609001;Parent=GSCOCG00032609001;Name=Cc11_g10200 | |
| 65850 chr11 manual_curation polypeptide 27598771 27601244 . + . ID=GSCOCP00032609001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR001509,InterPro:IPR016040,PFAM:PF01370,SwissProt:P51110,SwissProt:Q84KP0,SwissProt:Q9XES5,TAIR:AT1G25460.1,TAIR:AT1G68540.1,TAIR:AT4G35420.1,TrEMBL:B9T062,TrEMBL:C5MRG2,TrEMBL:D7T953;Derives_from=GSCOCT00032609001;Name=Cc11_g10200;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,GO:0044237,GO:0050662,CC_EC_number:1.1.1.219,PRODUCT:Putative Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase,CC_functional_completeness:complete,CC_gene:DFR;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032609001~ Putative Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase~ DFR~ complete;original_location=complement(join(3743790..3743895%2C3743055..3743227%2C3742393..3742581%2C3742074..3742236%2C3741766..3741928%2C3741422..3741584));owner=coffea | |
| 65851 chr11 manual_curation exon 27598416 27598492 . + . Parent=GSCOCT00032609001 | |
| 65852 chr11 manual_curation exon 27601082 27601478 . + . Parent=GSCOCT00032609001 | |
| 65853 chr11 manual_curation exon 27600738 27600900 . + . Parent=GSCOCT00032609001 | |
| 65854 chr11 manual_curation exon 27600430 27600592 . + . Parent=GSCOCT00032609001 | |
| 65855 chr11 manual_curation exon 27600085 27600273 . + . Parent=GSCOCT00032609001 | |
| 65856 chr11 manual_curation exon 27599439 27599611 . + . Parent=GSCOCT00032609001 | |
| 65857 chr11 manual_curation exon 27598591 27598876 . + . Parent=GSCOCT00032609001 | |
| 65858 chr11 manual_curation CDS 27601082 27601244 . + 2 Parent=GSCOCT00032609001 | |
| 65859 chr11 manual_curation CDS 27600738 27600900 . + 1 Parent=GSCOCT00032609001 | |
| 65860 chr11 manual_curation CDS 27600430 27600592 . + 0 Parent=GSCOCT00032609001 | |
| 65861 chr11 manual_curation CDS 27600085 27600273 . + 0 Parent=GSCOCT00032609001 | |
| 65862 chr11 manual_curation CDS 27599439 27599611 . + 1 Parent=GSCOCT00032609001 | |
| 65863 chr11 manual_curation CDS 27598771 27598876 . + 0 Parent=GSCOCT00032609001 | |
| 65864 chr11 manual_curation gene 27605672 27606868 . - . ID=GSCOCG00032607001;Name=Cc11_g10210 | |
| 65865 chr11 manual_curation mRNA 27605672 27606868 . - . ID=GSCOCT00032607001;Parent=GSCOCG00032607001;Name=Cc11_g10210 | |
| 65866 chr11 manual_curation polypeptide 27605723 27606868 . - . ID=GSCOCP00032607001;Dbxref=GENE3D:G3DSA:3.30.730.10,InterPro:IPR001471,InterPro:IPR016177,PFAM:PF00847,PRINTS:PR00367,PROFILE:PS51032,SMART:SM00380,SUPERFAMILY:SSF54171,SwissProt:Q9CA27,SwissProt:Q9LUA2,SwissProt:Q9SUQ2,TAIR:AT1G68550.1,TAIR:AT3G25890.1,TAIR:AT4G23750.1,TrEMBL:B9HWI2,TrEMBL:B9T063,TrEMBL:F6HEX1;Derives_from=GSCOCT00032607001;Name=Cc11_g10210;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,CC_EC_number:missing_EC_number,PRODUCT:Putative Ethylene-responsive transcription factor ERF118,CC_functional_completeness:complete,CC_gene:ERF118,CC_gene:ERF119,CC_gene:CRF2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032607001~ Putative Ethylene-responsive transcription factor ERF118~ ERF118~ complete;original_location=3735798..3736943;owner=coffea | |
| 65867 chr11 manual_curation exon 27605672 27606868 . - . Parent=GSCOCT00032607001 | |
| 65868 chr11 manual_curation CDS 27605723 27606868 . - 0 Parent=GSCOCT00032607001 | |
| 65869 chr11 manual_curation gene 27606924 27607836 . - . ID=GSCOCG00032606001;Name=Cc11_g10220 | |
| 65870 chr11 manual_curation mRNA 27606924 27607836 . - . ID=GSCOCT00032606001;Parent=GSCOCG00032606001;Name=Cc11_g10220 | |
| 65871 chr11 manual_curation polypeptide 27607039 27607528 . - . ID=GSCOCP00032606001;Derives_from=GSCOCT00032606001;Name=Cc11_g10220;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032606001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(3735138..3735322%2C3735540..3735627);owner=coffea | |
| 65872 chr11 manual_curation exon 27607344 27607836 . - . Parent=GSCOCT00032606001 | |
| 65873 chr11 manual_curation exon 27606924 27607126 . - . Parent=GSCOCT00032606001 | |
| 65874 chr11 manual_curation CDS 27607344 27607528 . - 0 Parent=GSCOCT00032606001 | |
| 65875 chr11 manual_curation CDS 27607039 27607126 . - 2 Parent=GSCOCT00032606001 | |
| 65876 chr11 manual_curation gene 27618301 27624324 . - . ID=GSCOCG00032605001;Name=Cc11_g10230 | |
| 65877 chr11 manual_curation mRNA 27618301 27624324 . - . ID=GSCOCT00032605001;Parent=GSCOCG00032605001;Name=Cc11_g10230 | |
| 65878 chr11 manual_curation polypeptide 27618552 27624174 . - . ID=GSCOCP00032605001;Dbxref=InterPro:IPR000322,InterPro:IPR017853,PANTHER:PTHR22762,PFAM:PF01055,PROSITE:PS00129,SUPERFAMILY:SSF51445,SwissProt:O04893,SwissProt:Q653V7,SwissProt:Q9S7Y7,TAIR:AT1G68560.1,TAIR:AT3G45940.1,TAIR:AT5G11720.1,TrEMBL:B9HJ23,TrEMBL:B9T066,TrEMBL:Q9LEC9;Derives_from=GSCOCT00032605001;Name=Cc11_g10230;Ontology_term=CC_evidence_code:ISS,GO:0005975,CC_EC_number:3.2.1.20,PRODUCT:Alpha-xylosidase,CC_functional_completeness:complete,CC_gene:XYL1,CC_gene:Os06g0675700;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032605001~ Alpha-xylosidase~ XYL1~ complete;original_location=join(3718492..3718724%2C3719088..3719782%2C3722232..3723974%2C3724020..3724114);owner=coffea | |
| 65879 chr11 manual_curation exon 27623942 27624324 . - . Parent=GSCOCT00032605001 | |
| 65880 chr11 manual_curation exon 27622884 27623578 . - . Parent=GSCOCT00032605001 | |
| 65881 chr11 manual_curation exon 27618692 27620434 . - . Parent=GSCOCT00032605001 | |
| 65882 chr11 manual_curation exon 27618301 27618646 . - . Parent=GSCOCT00032605001 | |
| 65883 chr11 manual_curation CDS 27623942 27624174 . - 0 Parent=GSCOCT00032605001 | |
| 65884 chr11 manual_curation CDS 27622884 27623578 . - 2 Parent=GSCOCT00032605001 | |
| 65885 chr11 manual_curation CDS 27618692 27620434 . - 1 Parent=GSCOCT00032605001 | |
| 65886 chr11 manual_curation CDS 27618552 27618646 . - 1 Parent=GSCOCT00032605001 | |
| 65887 chr11 manual_curation gene 27641506 27643076 . + . ID=GSCOCG00032603001;Name=Cc11_g10240 | |
| 65888 chr11 manual_curation mRNA 27641506 27643076 . + . ID=GSCOCT00032603001;Parent=GSCOCG00032603001;Name=Cc11_g10240 | |
| 65889 chr11 manual_curation polypeptide 27641661 27643076 . + . ID=GSCOCP00032603001;Dbxref=InterPro:IPR000322,PANTHER:PTHR22762,PFAM:PF01055,SwissProt:Q43763,SwissProt:Q653V7,SwissProt:Q9S7Y7,TAIR:AT1G68560.1,TAIR:AT3G45940.1,TAIR:AT5G11720.1,TrEMBL:B9T066,TrEMBL:I1J6K4,TrEMBL:Q9LEC9;Derives_from=GSCOCT00032603001;Name=Cc11_g10240;Ontology_term=CC_evidence_code:ISS,GO:0005975,CC_EC_number:3.2.1.3,PRODUCT:Putative Glycosyl hydrolases family 31 protein,CC_functional_completeness:fragment,CC_gene:XYL1,CC_gene:Os06g0675700;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032603001~ Putative Glycosyl hydrolases family 31 protein~ XYL1~ fragment;original_location=complement(join(3700773..3701005%2C3699590..3700409));owner=coffea | |
| 65890 chr11 manual_curation exon 27642257 27643076 . + . Parent=GSCOCT00032603001 | |
| 65891 chr11 manual_curation exon 27641506 27641893 . + . Parent=GSCOCT00032603001 | |
| 65892 chr11 manual_curation CDS 27642257 27643076 . + 2 Parent=GSCOCT00032603001 | |
| 65893 chr11 manual_curation CDS 27641661 27641893 . + 0 Parent=GSCOCT00032603001 | |
| 65894 chr11 manual_curation gene 27703700 27708240 . + . ID=GSCOCG00032601001;Name=Cc11_g10250 | |
| 65895 chr11 manual_curation mRNA 27703700 27708240 . + . ID=GSCOCT00032601001;Parent=GSCOCG00032601001;Name=Cc11_g10250 | |
| 65896 chr11 manual_curation polypeptide 27703700 27708049 . + . ID=GSCOCP00032601001;Dbxref=InterPro:IPR000109,InterPro:IPR016196,PFAM:PF00854,SUPERFAMILY:SSF103473,SwissProt:Q9LFB8,SwissProt:Q9M390,SwissProt:Q9SX20,TAIR:AT1G68570.1,TAIR:AT3G54140.1,TAIR:AT5G01180.1,TrEMBL:B9HWI7,TrEMBL:F6HEX6,TrEMBL:G7JZD5;Derives_from=GSCOCT00032601001;Name=Cc11_g10250;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006857,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Probable nitrite transporter At1g68570,CC_functional_completeness:complete,CC_gene:At1g68570,CC_gene:PTR1,CC_gene:PTR5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032601001~ Probable nitrite transporter At1g68570~ At1g68570~ complete;original_location=complement(join(3638862..3638966%2C3638465..3638500%2C3637705..3638267%2C3634617..3635502));owner=coffea | |
| 65897 chr11 manual_curation exon 27707164 27708240 . + . Parent=GSCOCT00032601001 | |
| 65898 chr11 manual_curation exon 27704399 27704961 . + . Parent=GSCOCT00032601001 | |
| 65899 chr11 manual_curation exon 27704166 27704201 . + . Parent=GSCOCT00032601001 | |
| 65900 chr11 manual_curation exon 27703700 27703804 . + . Parent=GSCOCT00032601001 | |
| 65901 chr11 manual_curation CDS 27707164 27708049 . + 2 Parent=GSCOCT00032601001 | |
| 65902 chr11 manual_curation CDS 27704399 27704961 . + 0 Parent=GSCOCT00032601001 | |
| 65903 chr11 manual_curation CDS 27704166 27704201 . + 0 Parent=GSCOCT00032601001 | |
| 65904 chr11 manual_curation CDS 27703700 27703804 . + 0 Parent=GSCOCT00032601001 | |
| 65905 chr11 manual_curation gene 27709578 27712960 . + . ID=GSCOCG00032600001;Name=Cc11_g10260 | |
| 65906 chr11 manual_curation mRNA 27709578 27712960 . + . ID=GSCOCT00032600001;Parent=GSCOCG00032600001;Name=Cc11_g10260 | |
| 65907 chr11 manual_curation polypeptide 27709749 27712960 . + . ID=GSCOCP00032600001;Dbxref=InterPro:IPR014830,PFAM:PF08718,SUPERFAMILY:SSF110004,TAIR:AT2G34690.1,TAIR:AT4G39670.1,TrEMBL:B9HJ18,TrEMBL:C6TJF4,TrEMBL:F6HEX7;Derives_from=GSCOCT00032600001;Name=Cc11_g10260;Ontology_term=CC_evidence_code:ISS,GO:0005737,GO:0017089,GO:0046836,GO:0051861,CC_EC_number:missing_EC_number,PRODUCT:Glycolipid transfer protein (GLTP) family protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032600001~ Glycolipid transfer protein (GLTP) family protein~ unknown_gene~ modules;original_location=complement(join(3632862..3632917%2C3632405..3632681%2C3631036..3631208%2C3630400..3630545%2C3629706..3629812));owner=coffea | |
| 65908 chr11 manual_curation exon 27712854 27712960 . + . Parent=GSCOCT00032600001 | |
| 65909 chr11 manual_curation exon 27712121 27712266 . + . Parent=GSCOCT00032600001 | |
| 65910 chr11 manual_curation exon 27711458 27711630 . + . Parent=GSCOCT00032600001 | |
| 65911 chr11 manual_curation exon 27709985 27710261 . + . Parent=GSCOCT00032600001 | |
| 65912 chr11 manual_curation exon 27709578 27709804 . + . Parent=GSCOCT00032600001 | |
| 65913 chr11 manual_curation CDS 27712854 27712960 . + 1 Parent=GSCOCT00032600001 | |
| 65914 chr11 manual_curation CDS 27712121 27712266 . + 2 Parent=GSCOCT00032600001 | |
| 65915 chr11 manual_curation CDS 27711458 27711630 . + 0 Parent=GSCOCT00032600001 | |
| 65916 chr11 manual_curation CDS 27709985 27710261 . + 2 Parent=GSCOCT00032600001 | |
| 65917 chr11 manual_curation CDS 27709749 27709804 . + 0 Parent=GSCOCT00032600001 | |
| 65918 chr11 manual_curation gene 27713911 27717949 . - . ID=GSCOCG00032599001;Name=Cc11_g10270 | |
| 65919 chr11 manual_curation mRNA 27713911 27717949 . - . ID=GSCOCT00032599001;Parent=GSCOCG00032599001;Name=Cc11_g10270 | |
| 65920 chr11 manual_curation polypeptide 27714198 27716865 . - . ID=GSCOCP00032599001;Dbxref=InterPro:IPR001078,PFAM:PF00198,SwissProt:O66119,SwissProt:Q1RJT3,SwissProt:Q4ULG1,TAIR:AT1G34430.1,TAIR:AT1G54220.1,TrEMBL:C5YL64;Derives_from=GSCOCT00032599001;Name=Cc11_g10270;Ontology_term=CC_evidence_code:ISS,GO:0008152,GO:0008415,CC_EC_number:2.3.1.61,PRODUCT:Putative Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex,CC_functional_completeness:fragment,CC_gene:pdhC;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032599001~ Putative Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex~ pdhC~ fragment;original_location=join(3625801..3625905%2C3626025..3626216%2C3626359..3626446%2C3626529..3626599%2C3626684..3626767%2C3628364..3628468);owner=coffea | |
| 65921 chr11 manual_curation exon 27716761 27717949 . - . Parent=GSCOCT00032599001 | |
| 65922 chr11 manual_curation exon 27716450 27716641 . - . Parent=GSCOCT00032599001 | |
| 65923 chr11 manual_curation exon 27716220 27716307 . - . Parent=GSCOCT00032599001 | |
| 65924 chr11 manual_curation exon 27716067 27716137 . - . Parent=GSCOCT00032599001 | |
| 65925 chr11 manual_curation exon 27715899 27715982 . - . Parent=GSCOCT00032599001 | |
| 65926 chr11 manual_curation exon 27713911 27714302 . - . Parent=GSCOCT00032599001 | |
| 65927 chr11 manual_curation CDS 27716761 27716865 . - 0 Parent=GSCOCT00032599001 | |
| 65928 chr11 manual_curation CDS 27716450 27716641 . - 0 Parent=GSCOCT00032599001 | |
| 65929 chr11 manual_curation CDS 27716220 27716307 . - 0 Parent=GSCOCT00032599001 | |
| 65930 chr11 manual_curation CDS 27716067 27716137 . - 1 Parent=GSCOCT00032599001 | |
| 65931 chr11 manual_curation CDS 27715899 27715982 . - 0 Parent=GSCOCT00032599001 | |
| 65932 chr11 manual_curation CDS 27714198 27714302 . - 0 Parent=GSCOCT00032599001 | |
| 65933 chr11 manual_curation gene 27732203 27737849 . + . ID=GSCOCG00032598001;Name=Cc11_g10280 | |
| 65934 chr11 manual_curation mRNA 27732203 27737849 . + . ID=GSCOCT00032598001;Parent=GSCOCG00032598001;Name=Cc11_g10280 | |
| 65935 chr11 manual_curation polypeptide 27732373 27737344 . + . ID=GSCOCP00032598001;Dbxref=InterPro:IPR001025,InterPro:IPR008395,InterPro:IPR014002,PFAM:PF01426,PFAM:PF05641,PROFILE:PS51038,SMART:SM00439,SMART:SM00743,TAIR:AT1G68580.2,TAIR:AT4G17330.1,TAIR:AT5G55600.1,TrEMBL:A5B418,TrEMBL:B9ST04,TrEMBL:F6HFN9;Derives_from=GSCOCT00032598001;Name=Cc11_g10280;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003723,CC_EC_number:missing_EC_number,PRODUCT:Putative agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032598001~ Putative agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein~ unknown_gene~ complete;original_location=complement(join(3610002..3610293%2C3607522..3607607%2C3607289..3607396%2C3606361..3607158%2C3605967..3606183%2C3605508..3605836%2C3605322..3605459));owner=coffea | |
| 65936 chr11 manual_curation exon 27737207 27737849 . + . Parent=GSCOCT00032598001 | |
| 65937 chr11 manual_curation exon 27736830 27737158 . + . Parent=GSCOCT00032598001 | |
| 65938 chr11 manual_curation exon 27736483 27736699 . + . Parent=GSCOCT00032598001 | |
| 65939 chr11 manual_curation exon 27735508 27736305 . + . Parent=GSCOCT00032598001 | |
| 65940 chr11 manual_curation exon 27735270 27735377 . + . Parent=GSCOCT00032598001 | |
| 65941 chr11 manual_curation exon 27735059 27735144 . + . Parent=GSCOCT00032598001 | |
| 65942 chr11 manual_curation exon 27732203 27732664 . + . Parent=GSCOCT00032598001 | |
| 65943 chr11 manual_curation CDS 27737207 27737344 . + 0 Parent=GSCOCT00032598001 | |
| 65944 chr11 manual_curation CDS 27736830 27737158 . + 1 Parent=GSCOCT00032598001 | |
| 65945 chr11 manual_curation CDS 27736483 27736699 . + 0 Parent=GSCOCT00032598001 | |
| 65946 chr11 manual_curation CDS 27735508 27736305 . + 0 Parent=GSCOCT00032598001 | |
| 65947 chr11 manual_curation CDS 27735270 27735377 . + 0 Parent=GSCOCT00032598001 | |
| 65948 chr11 manual_curation CDS 27735059 27735144 . + 1 Parent=GSCOCT00032598001 | |
| 65949 chr11 manual_curation CDS 27732373 27732664 . + 0 Parent=GSCOCT00032598001 | |
| 65950 chr11 manual_curation gene 27739386 27740964 . - . ID=GSCOCG00032597001;Name=Cc11_g10290 | |
| 65951 chr11 manual_curation mRNA 27739386 27740964 . - . ID=GSCOCT00032597001;Parent=GSCOCG00032597001;Name=Cc11_g10290 | |
| 65952 chr11 manual_curation polypeptide 27739741 27740064 . - . ID=GSCOCP00032597001;Derives_from=GSCOCT00032597001;Name=Cc11_g10290;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032597001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=3602602..3602925;owner=coffea | |
| 65953 chr11 manual_curation exon 27739386 27740964 . - . Parent=GSCOCT00032597001 | |
| 65954 chr11 manual_curation CDS 27739741 27740064 . - 0 Parent=GSCOCT00032597001 | |
| 65955 chr11 manual_curation gene 27742477 27743434 . + . ID=GSCOCG00032595001;Name=Cc11_g10300 | |
| 65956 chr11 manual_curation mRNA 27742477 27743434 . + . ID=GSCOCT00032595001;Parent=GSCOCG00032595001;Name=Cc11_g10300 | |
| 65957 chr11 manual_curation polypeptide 27742781 27743176 . + . ID=GSCOCP00032595001;Dbxref=InterPro:IPR006121,SUPERFAMILY:SSF55008,TAIR:AT3G25855.1,TrEMBL:B9ST06,TrEMBL:D7LQV8,TrEMBL:G7JZE9;Derives_from=GSCOCT00032595001;Name=Cc11_g10300;Ontology_term=CC_evidence_code:ISS,GO:0030001,GO:0046872,CC_EC_number:missing_EC_number,PRODUCT:Copper transport protein family,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032595001~ Copper transport protein family~ unknown_gene~ fragment;original_location=complement(join(3599813..3599885%2C3599490..3599707));owner=coffea | |
| 65958 chr11 manual_curation exon 27742959 27743434 . + . Parent=GSCOCT00032595001 | |
| 65959 chr11 manual_curation exon 27742477 27742853 . + . Parent=GSCOCT00032595001 | |
| 65960 chr11 manual_curation CDS 27742959 27743176 . + 1 Parent=GSCOCT00032595001 | |
| 65961 chr11 manual_curation CDS 27742781 27742853 . + 0 Parent=GSCOCT00032595001 | |
| 65962 chr11 manual_curation gene 27744628 27750564 . + . ID=GSCOCG00032594001;Name=Cc11_g10310 | |
| 65963 chr11 manual_curation mRNA 27744628 27750564 . + . ID=GSCOCT00032594001;Parent=GSCOCG00032594001;Name=Cc11_g10310 | |
| 65964 chr11 manual_curation polypeptide 27744798 27750564 . + . ID=GSCOCP00032594001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q08DZ2,SwissProt:Q5RKH1,SwissProt:Q61136,TAIR:AT1G13350.2,TAIR:AT3G25840.1,TAIR:AT3G53640.1,TrEMBL:A5BV85,TrEMBL:B9ST07,TrEMBL:F6HFP0;Derives_from=GSCOCT00032594001;Name=Cc11_g10310;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.12.1,PRODUCT:Protein kinase superfamily protein,CC_functional_completeness:modules,CC_gene:Prpf4b,CC_gene:PRPF4B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032594001~ Protein kinase superfamily protein~ Prpf4b~ modules;original_location=complement(join(3597392..3597868%2C3595559..3596628%2C3595300..3595475%2C3594847..3595046%2C3594559..3594627%2C3594279..3594351%2C3593738..3593894%2C3593334..3593625%2C3593121..3593235%2C3592828..3592991%2C3592423..3592497%2C3592102..3592290));owner=coffea | |
| 65965 chr11 manual_curation exon 27750376 27750564 . + . Parent=GSCOCT00032594001 | |
| 65966 chr11 manual_curation exon 27750169 27750243 . + . Parent=GSCOCT00032594001 | |
| 65967 chr11 manual_curation exon 27749675 27749838 . + . Parent=GSCOCT00032594001 | |
| 65968 chr11 manual_curation exon 27749431 27749545 . + . Parent=GSCOCT00032594001 | |
| 65969 chr11 manual_curation exon 27749041 27749332 . + . Parent=GSCOCT00032594001 | |
| 65970 chr11 manual_curation exon 27748772 27748928 . + . Parent=GSCOCT00032594001 | |
| 65971 chr11 manual_curation exon 27748315 27748387 . + . Parent=GSCOCT00032594001 | |
| 65972 chr11 manual_curation exon 27748039 27748107 . + . Parent=GSCOCT00032594001 | |
| 65973 chr11 manual_curation exon 27747620 27747819 . + . Parent=GSCOCT00032594001 | |
| 65974 chr11 manual_curation exon 27747191 27747366 . + . Parent=GSCOCT00032594001 | |
| 65975 chr11 manual_curation exon 27746038 27747107 . + . Parent=GSCOCT00032594001 | |
| 65976 chr11 manual_curation exon 27744628 27745274 . + . Parent=GSCOCT00032594001 | |
| 65977 chr11 manual_curation CDS 27750376 27750564 . + 0 Parent=GSCOCT00032594001 | |
| 65978 chr11 manual_curation CDS 27750169 27750243 . + 0 Parent=GSCOCT00032594001 | |
| 65979 chr11 manual_curation CDS 27749675 27749838 . + 1 Parent=GSCOCT00032594001 | |
| 65980 chr11 manual_curation CDS 27749431 27749545 . + 0 Parent=GSCOCT00032594001 | |
| 65981 chr11 manual_curation CDS 27749041 27749332 . + 2 Parent=GSCOCT00032594001 | |
| 65982 chr11 manual_curation CDS 27748772 27748928 . + 1 Parent=GSCOCT00032594001 | |
| 65983 chr11 manual_curation CDS 27748315 27748387 . + 0 Parent=GSCOCT00032594001 | |
| 65984 chr11 manual_curation CDS 27748039 27748107 . + 0 Parent=GSCOCT00032594001 | |
| 65985 chr11 manual_curation CDS 27747620 27747819 . + 1 Parent=GSCOCT00032594001 | |
| 65986 chr11 manual_curation CDS 27747191 27747366 . + 2 Parent=GSCOCT00032594001 | |
| 65987 chr11 manual_curation CDS 27746038 27747107 . + 0 Parent=GSCOCT00032594001 | |
| 65988 chr11 manual_curation CDS 27744798 27745274 . + 0 Parent=GSCOCT00032594001 | |
| 65989 chr11 manual_curation gene 27750665 27752046 . + . ID=GSCOCG00032593001;Name=Cc11_g10320 | |
| 65990 chr11 manual_curation mRNA 27750665 27752046 . + . ID=GSCOCT00032593001;Parent=GSCOCG00032593001;Name=Cc11_g10320 | |
| 65991 chr11 manual_curation polypeptide 27750665 27751749 . + . ID=GSCOCP00032593001;Derives_from=GSCOCT00032593001;Name=Cc11_g10320;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032593001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(3591866..3592001%2C3591388..3591452%2C3590917..3590967));owner=coffea | |
| 65992 chr11 manual_curation exon 27751699 27752046 . + . Parent=GSCOCT00032593001 | |
| 65993 chr11 manual_curation exon 27751214 27751278 . + . Parent=GSCOCT00032593001 | |
| 65994 chr11 manual_curation exon 27750665 27750800 . + . Parent=GSCOCT00032593001 | |
| 65995 chr11 manual_curation CDS 27751699 27751749 . + 0 Parent=GSCOCT00032593001 | |
| 65996 chr11 manual_curation CDS 27751214 27751278 . + 1 Parent=GSCOCT00032593001 | |
| 65997 chr11 manual_curation CDS 27750665 27750800 . + 0 Parent=GSCOCT00032593001 | |
| 65998 chr11 manual_curation gene 27758873 27761325 . + . ID=GSCOCG00032591001;Name=Cc11_g10330 | |
| 65999 chr11 manual_curation mRNA 27758873 27761325 . + . ID=GSCOCT00032591001;Parent=GSCOCG00032591001;Name=Cc11_g10330 | |
| 66000 chr11 manual_curation polypeptide 27759167 27761010 . + . ID=GSCOCP00032591001;Dbxref=InterPro:IPR005061,PFAM:PF03398,SwissProt:P53990,SwissProt:Q3ZBV1,SwissProt:Q54I39,TAIR:AT1G13340.1,TAIR:AT1G25420.1,TAIR:AT4G35730.1,TrEMBL:A5BV84,TrEMBL:F6HFP2,TrEMBL:I1KWU2;Derives_from=GSCOCT00032591001;Name=Cc11_g10330;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:DDB_G0289029,CC_gene:IST1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032591001~ Putative uncharacterized protein~ DDB_G0289029~ complete;original_location=complement(join(3583314..3583499%2C3583112..3583215%2C3582851..3583022%2C3582632..3582754%2C3581656..3582528));owner=coffea | |
| 66001 chr11 manual_curation exon 27760138 27761325 . + . Parent=GSCOCT00032591001 | |
| 66002 chr11 manual_curation exon 27759912 27760034 . + . Parent=GSCOCT00032591001 | |
| 66003 chr11 manual_curation exon 27759644 27759815 . + . Parent=GSCOCT00032591001 | |
| 66004 chr11 manual_curation exon 27759451 27759554 . + . Parent=GSCOCT00032591001 | |
| 66005 chr11 manual_curation exon 27758873 27759352 . + . Parent=GSCOCT00032591001 | |
| 66006 chr11 manual_curation CDS 27760138 27761010 . + 0 Parent=GSCOCT00032591001 | |
| 66007 chr11 manual_curation CDS 27759912 27760034 . + 0 Parent=GSCOCT00032591001 | |
| 66008 chr11 manual_curation CDS 27759644 27759815 . + 2 Parent=GSCOCT00032591001 | |
| 66009 chr11 manual_curation CDS 27759451 27759554 . + 0 Parent=GSCOCT00032591001 | |
| 66010 chr11 manual_curation CDS 27759167 27759352 . + 0 Parent=GSCOCT00032591001 | |
| 66011 chr11 manual_curation gene 27762222 27764089 . - . ID=GSCOCG00032590001;Name=Cc11_g10340 | |
| 66012 chr11 manual_curation mRNA 27762222 27764089 . - . ID=GSCOCT00032590001;Parent=GSCOCG00032590001;Name=Cc11_g10340 | |
| 66013 chr11 manual_curation polypeptide 27762280 27764042 . - . ID=GSCOCP00032590001;Dbxref=InterPro:IPR010776,PANTHER:PTHR15938,PFAM:PF07106,SwissProt:O35047,SwissProt:Q91ZY6,SwissProt:Q9FX64,TAIR:AT1G13330.1,TrEMBL:B9HJ11,TrEMBL:B9ST09,TrEMBL:D7KQE8;Derives_from=GSCOCT00032590001;Name=Cc11_g10340;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Homologous-pairing protein 2 homolog,CC_functional_completeness:complete,CC_gene:HOP2,CC_gene:Psmc3ip;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032590001~ Homologous-pairing protein 2 homolog~ HOP2~ complete;original_location=join(3578624..3578651%2C3578873..3578898%2C3579411..3579678%2C3579859..3579929%2C3580026..3580214%2C3580288..3580386);owner=coffea | |
| 66014 chr11 manual_curation exon 27764015 27764089 . - . Parent=GSCOCT00032590001 | |
| 66015 chr11 manual_curation exon 27763768 27763793 . - . Parent=GSCOCT00032590001 | |
| 66016 chr11 manual_curation exon 27762988 27763255 . - . Parent=GSCOCT00032590001 | |
| 66017 chr11 manual_curation exon 27762737 27762807 . - . Parent=GSCOCT00032590001 | |
| 66018 chr11 manual_curation exon 27762452 27762640 . - . Parent=GSCOCT00032590001 | |
| 66019 chr11 manual_curation exon 27762222 27762378 . - . Parent=GSCOCT00032590001 | |
| 66020 chr11 manual_curation CDS 27764015 27764042 . - 0 Parent=GSCOCT00032590001 | |
| 66021 chr11 manual_curation CDS 27763768 27763793 . - 1 Parent=GSCOCT00032590001 | |
| 66022 chr11 manual_curation CDS 27762988 27763255 . - 0 Parent=GSCOCT00032590001 | |
| 66023 chr11 manual_curation CDS 27762737 27762807 . - 1 Parent=GSCOCT00032590001 | |
| 66024 chr11 manual_curation CDS 27762452 27762640 . - 0 Parent=GSCOCT00032590001 | |
| 66025 chr11 manual_curation CDS 27762280 27762378 . - 0 Parent=GSCOCT00032590001 | |
| 66026 chr11 manual_curation gene 27765365 27767936 . + . ID=GSCOCG00032589001;Name=Cc11_g10350 | |
| 66027 chr11 manual_curation mRNA 27765365 27767936 . + . ID=GSCOCT00032589001;Parent=GSCOCG00032589001;Name=Cc11_g10350 | |
| 66028 chr11 manual_curation polypeptide 27765515 27767814 . + . ID=GSCOCP00032589001;Dbxref=TAIR:AT3G25805.1,TrEMBL:B9ST10,TrEMBL:D7T970,TrEMBL:G7JZC5;Derives_from=GSCOCT00032589001;Name=Cc11_g10350;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B Has 98 Blast hits to 98 proteins in 45 species,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032589001~ unknown protein%3B Has 98 Blast hits to 98 proteins in 45 species: Archae - 0%3B Bacteria - 51%3B Metazoa - 0%3B Fungi - 0%3B Plants - 43%3B Viruses - 0%3B Other Eukaryotes - 4 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(3576786..3577151%2C3576479..3576572%2C3576245..3576282%2C3576010..3576145%2C3574852..3575267));owner=coffea | |
| 66029 chr11 manual_curation exon 27767399 27767936 . + . Parent=GSCOCT00032589001 | |
| 66030 chr11 manual_curation exon 27766521 27766656 . + . Parent=GSCOCT00032589001 | |
| 66031 chr11 manual_curation exon 27766384 27766421 . + . Parent=GSCOCT00032589001 | |
| 66032 chr11 manual_curation exon 27766094 27766187 . + . Parent=GSCOCT00032589001 | |
| 66033 chr11 manual_curation exon 27765365 27765880 . + . Parent=GSCOCT00032589001 | |
| 66034 chr11 manual_curation CDS 27767399 27767814 . + 1 Parent=GSCOCT00032589001 | |
| 66035 chr11 manual_curation CDS 27766521 27766656 . + 0 Parent=GSCOCT00032589001 | |
| 66036 chr11 manual_curation CDS 27766384 27766421 . + 1 Parent=GSCOCT00032589001 | |
| 66037 chr11 manual_curation CDS 27766094 27766187 . + 0 Parent=GSCOCT00032589001 | |
| 66038 chr11 manual_curation CDS 27765515 27765880 . + 0 Parent=GSCOCT00032589001 | |
| 66039 chr11 manual_curation gene 27768373 27769529 . - . ID=GSCOCG00032588001;Name=Cc11_g10360 | |
| 66040 chr11 manual_curation mRNA 27768373 27769529 . - . ID=GSCOCT00032588001;Parent=GSCOCG00032588001;Name=Cc11_g10360 | |
| 66041 chr11 manual_curation polypeptide 27768667 27769295 . - . ID=GSCOCP00032588001;Dbxref=InterPro:IPR006924,PFAM:PF04839,PRODOM:PD015453,SwissProt:O48609,SwissProt:P82412,SwissProt:Q9SX22,TAIR:AT1G68590.1,TAIR:AT5G15760.1,TrEMBL:B9HJ10,TrEMBL:B9HWJ9,TrEMBL:B9ST11;Derives_from=GSCOCT00032588001;Name=Cc11_g10360;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,GO:0009536,CC_EC_number:missing_EC_number,PRODUCT:30S ribosomal protein 3%2C chloroplastic,CC_functional_completeness:complete,CC_gene:At1g68590,CC_gene:PSRP3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032588001~ 30S ribosomal protein 3%2C chloroplastic~ At1g68590~ complete;original_location=join(3573371..3573631%2C3573709..3573999);owner=coffea | |
| 66042 chr11 manual_curation exon 27769035 27769529 . - . Parent=GSCOCT00032588001 | |
| 66043 chr11 manual_curation exon 27768373 27768957 . - . Parent=GSCOCT00032588001 | |
| 66044 chr11 manual_curation CDS 27769035 27769295 . - 0 Parent=GSCOCT00032588001 | |
| 66045 chr11 manual_curation CDS 27768667 27768957 . - 0 Parent=GSCOCT00032588001 | |
| 66046 chr11 manual_curation gene 27771355 27773877 . + . ID=GSCOCG00032587001;Name=Cc11_g10370 | |
| 66047 chr11 manual_curation mRNA 27771355 27773877 . + . ID=GSCOCT00032587001;Parent=GSCOCG00032587001;Name=Cc11_g10370 | |
| 66048 chr11 manual_curation polypeptide 27771355 27773877 . + . ID=GSCOCP00032587001;Dbxref=InterPro:IPR002937,InterPro:IPR007526,PFAM:PF01593,PFAM:PF04433,PROFILE:PS50934,SwissProt:Q6Z690,SwissProt:Q8VXV7,SwissProt:Q9CAE3,TAIR:AT1G62830.1,TAIR:AT3G10390.1,TAIR:AT3G13682.1,TrEMBL:B9GQ41,TrEMBL:B9SUY7,TrEMBL:I1L4D4;Derives_from=GSCOCT00032587001;Name=Cc11_g10370;Ontology_term=CC_evidence_code:ISS,CC_EC_number:1.5.3.11,PRODUCT:Lysine-specific histone demethylase 1 homolog 1,CC_functional_completeness:complete,CC_gene:LDL1,CC_gene:Os02g0755200,CC_gene:FLD;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032587001~ Lysine-specific histone demethylase 1 homolog 1~ LDL1~ complete;original_location=complement(3568789..3571311);owner=coffea | |
| 66049 chr11 manual_curation exon 27771355 27773877 . + . Parent=GSCOCT00032587001 | |
| 66050 chr11 manual_curation CDS 27771355 27773877 . + 0 Parent=GSCOCT00032587001 | |
| 66051 chr11 manual_curation gene 27775455 27782710 . + . ID=GSCOCG00032586001;Name=Cc11_g10380 | |
| 66052 chr11 manual_curation mRNA 27775455 27782710 . + . ID=GSCOCT00032586001;Parent=GSCOCG00032586001;Name=Cc11_g10380 | |
| 66053 chr11 manual_curation polypeptide 27775455 27782361 . + . ID=GSCOCP00032586001;Dbxref=GENE3D:G3DSA:1.25.10.10,InterPro:IPR000357,InterPro:IPR011989,InterPro:IPR016024,InterPro:IPR021133,PFAM:PF02985,PROFILE:PS50077,SUPERFAMILY:SSF48371,SwissProt:Q38845,TAIR:AT1G25490.1;Derives_from=GSCOCT00032586001;Name=Cc11_g10380;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform,CC_functional_completeness:complete,CC_gene:PP2AA2,CC_gene:PP2AA3,CC_gene:PP2AA1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032586001~ Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform~ PP2AA2~ complete;original_location=complement(join(3567157..3567211%2C3567003..3567082%2C3566028..3566426%2C3565354..3565600%2C3564629..3564741%2C3564023..3564102%2C3563575..3563716%2C3563404..3563484%2C3562938..3563042%2C3562145..3562327%2C3561626..3561718%2C3560690..3560829%2C3560534..3560600%2C3560305..3560424));owner=coffea | |
| 66054 chr11 manual_curation exon 27782242 27782710 . + . Parent=GSCOCT00032586001 | |
| 66055 chr11 manual_curation exon 27782066 27782132 . + . Parent=GSCOCT00032586001 | |
| 66056 chr11 manual_curation exon 27781837 27781976 . + . Parent=GSCOCT00032586001 | |
| 66057 chr11 manual_curation exon 27780948 27781040 . + . Parent=GSCOCT00032586001 | |
| 66058 chr11 manual_curation exon 27780339 27780521 . + . Parent=GSCOCT00032586001 | |
| 66059 chr11 manual_curation exon 27779624 27779728 . + . Parent=GSCOCT00032586001 | |
| 66060 chr11 manual_curation exon 27779182 27779262 . + . Parent=GSCOCT00032586001 | |
| 66061 chr11 manual_curation exon 27778950 27779091 . + . Parent=GSCOCT00032586001 | |
| 66062 chr11 manual_curation exon 27778564 27778643 . + . Parent=GSCOCT00032586001 | |
| 66063 chr11 manual_curation exon 27777925 27778037 . + . Parent=GSCOCT00032586001 | |
| 66064 chr11 manual_curation exon 27777066 27777312 . + . Parent=GSCOCT00032586001 | |
| 66065 chr11 manual_curation exon 27776240 27776638 . + . Parent=GSCOCT00032586001 | |
| 66066 chr11 manual_curation exon 27775584 27775663 . + . Parent=GSCOCT00032586001 | |
| 66067 chr11 manual_curation exon 27775455 27775509 . + . Parent=GSCOCT00032586001 | |
| 66068 chr11 manual_curation CDS 27782242 27782361 . + 0 Parent=GSCOCT00032586001 | |
| 66069 chr11 manual_curation CDS 27782066 27782132 . + 2 Parent=GSCOCT00032586001 | |
| 66070 chr11 manual_curation CDS 27781837 27781976 . + 0 Parent=GSCOCT00032586001 | |
| 66071 chr11 manual_curation CDS 27780948 27781040 . + 0 Parent=GSCOCT00032586001 | |
| 66072 chr11 manual_curation CDS 27780339 27780521 . + 0 Parent=GSCOCT00032586001 | |
| 66073 chr11 manual_curation CDS 27779624 27779728 . + 0 Parent=GSCOCT00032586001 | |
| 66074 chr11 manual_curation CDS 27779182 27779262 . + 0 Parent=GSCOCT00032586001 | |
| 66075 chr11 manual_curation CDS 27778950 27779091 . + 2 Parent=GSCOCT00032586001 | |
| 66076 chr11 manual_curation CDS 27778564 27778643 . + 0 Parent=GSCOCT00032586001 | |
| 66077 chr11 manual_curation CDS 27777925 27778037 . + 1 Parent=GSCOCT00032586001 | |
| 66078 chr11 manual_curation CDS 27777066 27777312 . + 0 Parent=GSCOCT00032586001 | |
| 66079 chr11 manual_curation CDS 27776240 27776638 . + 0 Parent=GSCOCT00032586001 | |
| 66080 chr11 manual_curation CDS 27775584 27775663 . + 1 Parent=GSCOCT00032586001 | |
| 66081 chr11 manual_curation CDS 27775455 27775509 . + 0 Parent=GSCOCT00032586001 | |
| 66082 chr11 manual_curation gene 27785471 27785765 . - . ID=GSCOCG00032584001;Name=Cc11_g10390 | |
| 66083 chr11 manual_curation mRNA 27785471 27785765 . - . ID=GSCOCT00032584001;Parent=GSCOCG00032584001;Name=Cc11_g10390 | |
| 66084 chr11 manual_curation polypeptide 27785471 27785765 . - . ID=GSCOCP00032584001;Dbxref=GENE3D:G3DSA:1.20.1080.10,InterPro:IPR000425,PANTHER:PTHR19139,PFAM:PF00230,PRINTS:PR00783,SUPERFAMILY:SSF81338,SwissProt:P25794,SwissProt:Q6EU94,SwissProt:Q9XF59,TAIR:AT1G01620.1,TAIR:AT3G61430.1,TAIR:AT4G23400.1,TrEMBL:E3V0I3,TrEMBL:O22339,TrEMBL:O49874;Derives_from=GSCOCT00032584001;Name=Cc11_g10390;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006810,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Aquaporin PIP1-2,CC_functional_completeness:fragment,CC_gene:PIP1-2,CC_gene:TRG-31,CC_gene:PIP1-1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032584001~ Aquaporin PIP1-2~ PIP1-2~ fragment;original_location=join(3556901..3557073%2C3557156..3557195);owner=coffea | |
| 66085 chr11 manual_curation exon 27785593 27785765 . - . Parent=GSCOCT00032584001 | |
| 66086 chr11 manual_curation exon 27785471 27785510 . - . Parent=GSCOCT00032584001 | |
| 66087 chr11 manual_curation CDS 27785593 27785765 . - 0 Parent=GSCOCT00032584001 | |
| 66088 chr11 manual_curation CDS 27785471 27785510 . - 2 Parent=GSCOCT00032584001 | |
| 66089 chr11 manual_curation gene 27792965 27794112 . - . ID=GSCOCG00032583001;Name=Cc11_g10400 | |
| 66090 chr11 manual_curation mRNA 27792965 27794112 . - . ID=GSCOCT00032583001;Parent=GSCOCG00032583001;Name=Cc11_g10400 | |
| 66091 chr11 manual_curation polypeptide 27793087 27794112 . - . ID=GSCOCP00032583001;Dbxref=InterPro:IPR002168,InterPro:IPR013094,PFAM:PF07859,PROSITE:PS01174,SwissProt:Q9LFR7,SwissProt:Q9LVB8,SwissProt:Q9SX25,TAIR:AT1G68620.1,TAIR:AT5G16080.1,TAIR:AT5G62180.1,TrEMBL:B9HJ07,TrEMBL:B9HWK2,TrEMBL:F6HFP6;Derives_from=GSCOCT00032583001;Name=Cc11_g10400;Ontology_term=CC_evidence_code:ISS,GO:0008152,GO:0016787,CC_EC_number:missing_EC_number,PRODUCT:Probable carboxylesterase 17,CC_functional_completeness:complete,CC_gene:CXE17,CC_gene:CXE6,CC_gene:CXE20;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032583001~ Probable carboxylesterase 17~ CXE17~ complete;original_location=3548554..3549579;owner=coffea | |
| 66092 chr11 manual_curation exon 27792965 27794112 . - . Parent=GSCOCT00032583001 | |
| 66093 chr11 manual_curation CDS 27793087 27794112 . - 0 Parent=GSCOCT00032583001 | |
| 66094 chr11 manual_curation gene 27797043 27799889 . - . ID=GSCOCG00032582001;Name=Cc11_g10410 | |
| 66095 chr11 manual_curation mRNA 27797043 27799889 . - . ID=GSCOCT00032582001;Parent=GSCOCG00032582001;Name=Cc11_g10410 | |
| 66096 chr11 manual_curation polypeptide 27797043 27799889 . - . ID=GSCOCP00032582001;Dbxref=InterPro:IPR006461,PFAM:PF04749,SwissProt:P0CW97,SwissProt:Q9LQU4,SwissProt:Q9SX24,TAIR:AT1G14870.1,TAIR:AT1G68610.1,TAIR:AT5G35525.1,TIGRFAMs:TIGR01571,TrEMBL:B9HWK3,TrEMBL:B9ST22,TrEMBL:D7T975;Derives_from=GSCOCT00032582001;Name=Cc11_g10410;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein PLANT CADMIUM RESISTANCE 11,CC_functional_completeness:modules,CC_gene:PCR11,CC_gene:PCR2,CC_gene:PCR3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032582001~ Protein PLANT CADMIUM RESISTANCE 11~ PCR11~ modules;original_location=join(3542777..3542854%2C3543927..3544245%2C3544978..3545049%2C3545194..3545406%2C3545547..3545623);owner=coffea | |
| 66097 chr11 manual_curation exon 27799812 27799889 . - . Parent=GSCOCT00032582001 | |
| 66098 chr11 manual_curation exon 27798421 27798739 . - . Parent=GSCOCT00032582001 | |
| 66099 chr11 manual_curation exon 27797617 27797688 . - . Parent=GSCOCT00032582001 | |
| 66100 chr11 manual_curation exon 27797260 27797472 . - . Parent=GSCOCT00032582001 | |
| 66101 chr11 manual_curation exon 27797043 27797119 . - . Parent=GSCOCT00032582001 | |
| 66102 chr11 manual_curation CDS 27799812 27799889 . - 0 Parent=GSCOCT00032582001 | |
| 66103 chr11 manual_curation CDS 27798421 27798739 . - 0 Parent=GSCOCT00032582001 | |
| 66104 chr11 manual_curation CDS 27797617 27797688 . - 1 Parent=GSCOCT00032582001 | |
| 66105 chr11 manual_curation CDS 27797260 27797472 . - 1 Parent=GSCOCT00032582001 | |
| 66106 chr11 manual_curation CDS 27797043 27797119 . - 1 Parent=GSCOCT00032582001 | |
| 66107 chr11 manual_curation gene 27800852 27803818 . + . ID=GSCOCG00032581001;Name=Cc11_g10420 | |
| 66108 chr11 manual_curation mRNA 27800852 27803818 . + . ID=GSCOCT00032581001;Parent=GSCOCG00032581001;Name=Cc11_g10420 | |
| 66109 chr11 manual_curation polypeptide 27800852 27803818 . + . ID=GSCOCP00032581001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q60CZ8,SwissProt:Q6L403,SwissProt:Q6L438,TAIR:AT1G53350.1,TAIR:AT1G58390.1,TAIR:AT5G35450.1,TrEMBL:A0FD16,TrEMBL:A0FD19,TrEMBL:A1X877;Derives_from=GSCOCT00032581001;Name=Cc11_g10420;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1A-6,CC_functional_completeness:fragment,CC_gene:R1A-6,CC_gene:R1A-10,CC_gene:R1B-17;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032581001~ Putative late blight resistance protein homolog R1A-6~ R1A-6~ fragment;original_location=complement(join(3541305..3541814%2C3541156..3541221%2C3538848..3541073));owner=coffea | |
| 66110 chr11 manual_curation exon 27801593 27803818 . + . Parent=GSCOCT00032581001 | |
| 66111 chr11 manual_curation exon 27801445 27801510 . + . Parent=GSCOCT00032581001 | |
| 66112 chr11 manual_curation exon 27800852 27801361 . + . Parent=GSCOCT00032581001 | |
| 66113 chr11 manual_curation CDS 27801593 27803818 . + 0 Parent=GSCOCT00032581001 | |
| 66114 chr11 manual_curation CDS 27801445 27801510 . + 0 Parent=GSCOCT00032581001 | |
| 66115 chr11 manual_curation CDS 27800852 27801361 . + 0 Parent=GSCOCT00032581001 | |
| 66116 chr11 manual_curation gene 27807995 27811324 . + . ID=GSCOCG00032580001;Name=Cc11_g10430 | |
| 66117 chr11 manual_curation mRNA 27807995 27811324 . + . ID=GSCOCT00032580001;Parent=GSCOCG00032580001;Name=Cc11_g10430 | |
| 66118 chr11 manual_curation polypeptide 27808500 27811324 . + . ID=GSCOCP00032580001;Dbxref=InterPro:IPR000109,PFAM:PF00854,SwissProt:O80436,SwissProt:P46032,SwissProt:Q9M1I2,TAIR:AT2G02040.1,TAIR:AT2G38100.1,TAIR:AT3G54450.1,TrEMBL:D7LKT1,TrEMBL:D8QV70,TrEMBL:I1KKB4;Derives_from=GSCOCT00032580001;Name=Cc11_g10430;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006857,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative peptide/nitrate transporter At2g38100,CC_functional_completeness:complete,CC_gene:At2g38100,CC_gene:PTR2,CC_gene:At3g54450;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032580001~ Putative peptide/nitrate transporter At2g38100~ At2g38100~ complete;original_location=complement(join(3533987..3534166%2C3532479..3533146%2C3531342..3532218));owner=coffea | |
| 66119 chr11 manual_curation exon 27808322 27808372 . + . Parent=GSCOCT00032580001 | |
| 66120 chr11 manual_curation exon 27807995 27808141 . + . Parent=GSCOCT00032580001 | |
| 66121 chr11 manual_curation exon 27810448 27811324 . + . Parent=GSCOCT00032580001 | |
| 66122 chr11 manual_curation exon 27809520 27810187 . + . Parent=GSCOCT00032580001 | |
| 66123 chr11 manual_curation exon 27808465 27808679 . + . Parent=GSCOCT00032580001 | |
| 66124 chr11 manual_curation CDS 27810448 27811324 . + 2 Parent=GSCOCT00032580001 | |
| 66125 chr11 manual_curation CDS 27809520 27810187 . + 0 Parent=GSCOCT00032580001 | |
| 66126 chr11 manual_curation CDS 27808500 27808679 . + 0 Parent=GSCOCT00032580001 | |
| 66127 chr11 manual_curation gene 27814452 27818555 . + . ID=GSCOCG00032579001;Name=Cc11_g10440 | |
| 66128 chr11 manual_curation mRNA 27814452 27818555 . + . ID=GSCOCT00032579001;Parent=GSCOCG00032579001;Name=Cc11_g10440 | |
| 66129 chr11 manual_curation polypeptide 27814826 27818257 . + . ID=GSCOCP00032579001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q60CZ8,SwissProt:Q6L3Z7,SwissProt:Q6L438,TAIR:AT1G53350.1,TAIR:AT5G43470.1,TAIR:AT5G48620.1,TrEMBL:A0FD16,TrEMBL:A0FD19,TrEMBL:A1X877;Derives_from=GSCOCT00032579001;Name=Cc11_g10440;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1A-6,CC_functional_completeness:fragment,CC_gene:R1A-6,CC_gene:R1A-10,CC_gene:R1B-14;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032579001~ Putative late blight resistance protein homolog R1A-6~ R1A-6~ fragment;original_location=complement(join(3527385..3527840%2C3524855..3526954%2C3524690..3524790%2C3524409..3524451));owner=coffea | |
| 66130 chr11 manual_curation exon 27818215 27818555 . + . Parent=GSCOCT00032579001 | |
| 66131 chr11 manual_curation exon 27817876 27817976 . + . Parent=GSCOCT00032579001 | |
| 66132 chr11 manual_curation exon 27815712 27817811 . + . Parent=GSCOCT00032579001 | |
| 66133 chr11 manual_curation exon 27814452 27815281 . + . Parent=GSCOCT00032579001 | |
| 66134 chr11 manual_curation CDS 27818215 27818257 . + 2 Parent=GSCOCT00032579001 | |
| 66135 chr11 manual_curation CDS 27817876 27817976 . + 0 Parent=GSCOCT00032579001 | |
| 66136 chr11 manual_curation CDS 27815712 27817811 . + 0 Parent=GSCOCT00032579001 | |
| 66137 chr11 manual_curation CDS 27814826 27815281 . + 0 Parent=GSCOCT00032579001 | |
| 66138 chr11 manual_curation gene 27823087 27827863 . + . ID=GSCOCG00032577001;Name=Cc11_g10450 | |
| 66139 chr11 manual_curation mRNA 27823087 27827863 . + . ID=GSCOCT00032577001;Parent=GSCOCG00032577001;Name=Cc11_g10450 | |
| 66140 chr11 manual_curation polypeptide 27823331 27827646 . + . ID=GSCOCP00032577001;Dbxref=InterPro:IPR000767,InterPro:IPR002182,PFAM:PF00931,PRINTS:PR00364,SwissProt:Q60CZ8,SwissProt:Q6L438,SwissProt:Q8W1E0,TAIR:AT1G58390.1,TAIR:AT5G35450.1,TAIR:AT5G43470.1,TrEMBL:A0FD16,TrEMBL:A0FD19,TrEMBL:A1X877;Derives_from=GSCOCT00032577001;Name=Cc11_g10450;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006915,GO:0006952,CC_EC_number:missing_EC_number,PRODUCT:Putative late blight resistance protein homolog R1A-6,CC_functional_completeness:fragment,CC_gene:R1A-6,CC_gene:R1A-10,CC_gene:R1A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032577001~ Putative late blight resistance protein homolog R1A-6~ R1A-6~ fragment;original_location=complement(join(3518865..3519335%2C3515020..3517272));owner=coffea | |
| 66141 chr11 manual_curation exon 27827774 27827863 . + . Parent=GSCOCT00032577001 | |
| 66142 chr11 manual_curation exon 27825394 27827669 . + . Parent=GSCOCT00032577001 | |
| 66143 chr11 manual_curation exon 27823087 27823801 . + . Parent=GSCOCT00032577001 | |
| 66144 chr11 manual_curation CDS 27825394 27827646 . + 0 Parent=GSCOCT00032577001 | |
| 66145 chr11 manual_curation CDS 27823331 27823801 . + 0 Parent=GSCOCT00032577001 | |
| 66146 chr11 manual_curation gene 27832838 27837832 . - . ID=GSCOCG00032574001;Name=Cc11_g10460 | |
| 66147 chr11 manual_curation mRNA 27832838 27837832 . - . ID=GSCOCT00032574001;Parent=GSCOCG00032574001;Name=Cc11_g10460 | |
| 66148 chr11 manual_curation polypeptide 27833103 27837582 . - . ID=GSCOCP00032574001;Dbxref=InterPro:IPR004827,InterPro:IPR011616,PFAM:PF00170,PROFILE:PS50217,PROSITE:PS00036,SMART:SM00338,SwissProt:O24160,SwissProt:Q41558,SwissProt:Q9SX27,TAIR:AT1G68640.1,TAIR:AT3G12250.4,TAIR:AT5G06950.1,TrEMBL:B9HJ06,TrEMBL:B9ST26,TrEMBL:D7T978;Derives_from=GSCOCT00032574001;Name=Cc11_g10460;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0043565,GO:0046983,CC_EC_number:missing_EC_number,PRODUCT:Transcription factor PERIANTHIA,CC_functional_completeness:complete,CC_gene:PAN,CC_gene:TGA21;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032574001~ Transcription factor PERIANTHIA~ PAN~ complete;original_location=join(3505084..3505175%2C3505332..3505438%2C3505588..3505667%2C3505825..3506028%2C3506396..3506473%2C3506561..3506620%2C3506866..3506943%2C3507395..3507440%2C3508694..3508965%2C3509057..3509302%2C3509417..3509563);owner=coffea | |
| 66149 chr11 manual_curation exon 27837491 27837832 . - . Parent=GSCOCT00032574001 | |
| 66150 chr11 manual_curation exon 27837228 27837334 . - . Parent=GSCOCT00032574001 | |
| 66151 chr11 manual_curation exon 27836999 27837078 . - . Parent=GSCOCT00032574001 | |
| 66152 chr11 manual_curation exon 27836638 27836841 . - . Parent=GSCOCT00032574001 | |
| 66153 chr11 manual_curation exon 27836193 27836270 . - . Parent=GSCOCT00032574001 | |
| 66154 chr11 manual_curation exon 27836046 27836105 . - . Parent=GSCOCT00032574001 | |
| 66155 chr11 manual_curation exon 27835723 27835800 . - . Parent=GSCOCT00032574001 | |
| 66156 chr11 manual_curation exon 27835226 27835271 . - . Parent=GSCOCT00032574001 | |
| 66157 chr11 manual_curation exon 27833701 27833972 . - . Parent=GSCOCT00032574001 | |
| 66158 chr11 manual_curation exon 27833364 27833609 . - . Parent=GSCOCT00032574001 | |
| 66159 chr11 manual_curation exon 27832838 27833249 . - . Parent=GSCOCT00032574001 | |
| 66160 chr11 manual_curation CDS 27837491 27837582 . - 0 Parent=GSCOCT00032574001 | |
| 66161 chr11 manual_curation CDS 27837228 27837334 . - 2 Parent=GSCOCT00032574001 | |
| 66162 chr11 manual_curation CDS 27836999 27837078 . - 1 Parent=GSCOCT00032574001 | |
| 66163 chr11 manual_curation CDS 27836638 27836841 . - 0 Parent=GSCOCT00032574001 | |
| 66164 chr11 manual_curation CDS 27836193 27836270 . - 0 Parent=GSCOCT00032574001 | |
| 66165 chr11 manual_curation CDS 27836046 27836105 . - 0 Parent=GSCOCT00032574001 | |
| 66166 chr11 manual_curation CDS 27835723 27835800 . - 0 Parent=GSCOCT00032574001 | |
| 66167 chr11 manual_curation CDS 27835226 27835271 . - 0 Parent=GSCOCT00032574001 | |
| 66168 chr11 manual_curation CDS 27833701 27833972 . - 1 Parent=GSCOCT00032574001 | |
| 66169 chr11 manual_curation CDS 27833364 27833609 . - 0 Parent=GSCOCT00032574001 | |
| 66170 chr11 manual_curation CDS 27833103 27833249 . - 0 Parent=GSCOCT00032574001 | |
| 66171 chr11 manual_curation gene 27892586 27898163 . + . ID=GSCOCG00032572001;Name=Cc11_g10470 | |
| 66172 chr11 manual_curation mRNA 27892586 27898163 . + . ID=GSCOCT00032572001;Parent=GSCOCG00032572001;Name=Cc11_g10470 | |
| 66173 chr11 manual_curation polypeptide 27892740 27897351 . + . ID=GSCOCP00032572001;Dbxref=InterPro:IPR001727,PANTHER:PTHR12608,PFAM:PF01169,SwissProt:B9G125,SwissProt:Q9C6M1,SwissProt:Q9SX28,TAIR:AT1G25520.1,TAIR:AT1G68650.1,TAIR:AT5G36290.1,TrEMBL:C6T4D7,TrEMBL:I1LEY6,TrEMBL:I1NFG4;Derives_from=GSCOCT00032572001;Name=Cc11_g10470;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:GDT1-like protein 4,CC_functional_completeness:complete,CC_gene:At1g25520,CC_gene:At1g68650,CC_gene:Os08g0433100;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032572001~ GDT1-like protein 4~ At1g25520~ complete;original_location=complement(join(3449906..3449926%2C3449712..3449780%2C3447512..3447571%2C3447369..3447416%2C3446939..3447024%2C3446672..3446708%2C3446522..3446569%2C3446012..3446080%2C3445885..3445929%2C3445723..3445784%2C3445469..3445541%2C3445315..3445386));owner=coffea | |
| 66174 chr11 manual_curation exon 27897280 27898163 . + . Parent=GSCOCT00032572001 | |
| 66175 chr11 manual_curation exon 27897125 27897197 . + . Parent=GSCOCT00032572001 | |
| 66176 chr11 manual_curation exon 27896882 27896943 . + . Parent=GSCOCT00032572001 | |
| 66177 chr11 manual_curation exon 27896737 27896781 . + . Parent=GSCOCT00032572001 | |
| 66178 chr11 manual_curation exon 27896586 27896654 . + . Parent=GSCOCT00032572001 | |
| 66179 chr11 manual_curation exon 27896097 27896144 . + . Parent=GSCOCT00032572001 | |
| 66180 chr11 manual_curation exon 27895958 27895994 . + . Parent=GSCOCT00032572001 | |
| 66181 chr11 manual_curation exon 27895642 27895727 . + . Parent=GSCOCT00032572001 | |
| 66182 chr11 manual_curation exon 27895250 27895297 . + . Parent=GSCOCT00032572001 | |
| 66183 chr11 manual_curation exon 27895095 27895154 . + . Parent=GSCOCT00032572001 | |
| 66184 chr11 manual_curation exon 27892886 27892954 . + . Parent=GSCOCT00032572001 | |
| 66185 chr11 manual_curation exon 27892586 27892760 . + . Parent=GSCOCT00032572001 | |
| 66186 chr11 manual_curation CDS 27897280 27897351 . + 0 Parent=GSCOCT00032572001 | |
| 66187 chr11 manual_curation CDS 27897125 27897197 . + 2 Parent=GSCOCT00032572001 | |
| 66188 chr11 manual_curation CDS 27896882 27896943 . + 0 Parent=GSCOCT00032572001 | |
| 66189 chr11 manual_curation CDS 27896737 27896781 . + 0 Parent=GSCOCT00032572001 | |
| 66190 chr11 manual_curation CDS 27896586 27896654 . + 0 Parent=GSCOCT00032572001 | |
| 66191 chr11 manual_curation CDS 27896097 27896144 . + 0 Parent=GSCOCT00032572001 | |
| 66192 chr11 manual_curation CDS 27895958 27895994 . + 2 Parent=GSCOCT00032572001 | |
| 66193 chr11 manual_curation CDS 27895642 27895727 . + 0 Parent=GSCOCT00032572001 | |
| 66194 chr11 manual_curation CDS 27895250 27895297 . + 0 Parent=GSCOCT00032572001 | |
| 66195 chr11 manual_curation CDS 27895095 27895154 . + 0 Parent=GSCOCT00032572001 | |
| 66196 chr11 manual_curation CDS 27892886 27892954 . + 0 Parent=GSCOCT00032572001 | |
| 66197 chr11 manual_curation CDS 27892740 27892760 . + 0 Parent=GSCOCT00032572001 | |
| 66198 chr11 manual_curation gene 27902486 27905908 . - . ID=GSCOCG00032571001;Name=Cc11_g10480 | |
| 66199 chr11 manual_curation mRNA 27902486 27905908 . - . ID=GSCOCT00032571001;Parent=GSCOCG00032571001;Name=Cc11_g10480 | |
| 66200 chr11 manual_curation polypeptide 27902852 27905767 . - . ID=GSCOCP00032571001;Dbxref=InterPro:IPR013057,PFAM:PF01490,SwissProt:Q9C6M2,SwissProt:Q9C733,SwissProt:Q9FKS8,TAIR:AT1G25530.1,TAIR:AT1G48640.1,TAIR:AT5G40780.1,TrEMBL:A5C4M2,TrEMBL:D7T983,TrEMBL:I1J6N5;Derives_from=GSCOCT00032571001;Name=Cc11_g10480;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Lysine histidine transporter-like 6,CC_functional_completeness:complete,CC_gene:At1g25530,CC_gene:LHT1,CC_gene:At1g48640;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032571001~ Lysine histidine transporter-like 6~ At1g25530~ complete;original_location=join(3436899..3436937%2C3437031..3437167%2C3437325..3437708%2C3438570..3438963%2C3439085..3439190%2C3439286..3439377%2C3439468..3439536%2C3439716..3439814);owner=coffea | |
| 66201 chr11 manual_curation exon 27905729 27905908 . - . Parent=GSCOCT00032571001 | |
| 66202 chr11 manual_curation exon 27905499 27905635 . - . Parent=GSCOCT00032571001 | |
| 66203 chr11 manual_curation exon 27904958 27905341 . - . Parent=GSCOCT00032571001 | |
| 66204 chr11 manual_curation exon 27903703 27904096 . - . Parent=GSCOCT00032571001 | |
| 66205 chr11 manual_curation exon 27903476 27903581 . - . Parent=GSCOCT00032571001 | |
| 66206 chr11 manual_curation exon 27903289 27903380 . - . Parent=GSCOCT00032571001 | |
| 66207 chr11 manual_curation exon 27903130 27903198 . - . Parent=GSCOCT00032571001 | |
| 66208 chr11 manual_curation exon 27902486 27902950 . - . Parent=GSCOCT00032571001 | |
| 66209 chr11 manual_curation CDS 27905729 27905767 . - 0 Parent=GSCOCT00032571001 | |
| 66210 chr11 manual_curation CDS 27905499 27905635 . - 0 Parent=GSCOCT00032571001 | |
| 66211 chr11 manual_curation CDS 27904958 27905341 . - 2 Parent=GSCOCT00032571001 | |
| 66212 chr11 manual_curation CDS 27903703 27904096 . - 2 Parent=GSCOCT00032571001 | |
| 66213 chr11 manual_curation CDS 27903476 27903581 . - 0 Parent=GSCOCT00032571001 | |
| 66214 chr11 manual_curation CDS 27903289 27903380 . - 1 Parent=GSCOCT00032571001 | |
| 66215 chr11 manual_curation CDS 27903130 27903198 . - 0 Parent=GSCOCT00032571001 | |
| 66216 chr11 manual_curation CDS 27902852 27902950 . - 0 Parent=GSCOCT00032571001 | |
| 66217 chr11 manual_curation gene 27907830 27915830 . - . ID=GSCOCG00032570001;Name=Cc11_g10490 | |
| 66218 chr11 manual_curation mRNA 27907830 27915830 . - . ID=GSCOCT00032570001;Parent=GSCOCG00032570001;Name=Cc11_g10490 | |
| 66219 chr11 manual_curation polypeptide 27908227 27915686 . - . ID=GSCOCP00032570001;Dbxref=InterPro:IPR021419,PFAM:PF11265,SwissProt:A4IHD9,SwissProt:Q6GP15,TAIR:AT1G25540.1,TrEMBL:E4MXP3,TrEMBL:F6HFQ0,TrEMBL:I1JDV6;Derives_from=GSCOCT00032570001;Name=Cc11_g10490;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:phytochrome and flowering time regulatory protein (PFT1),CC_functional_completeness:complete,CC_gene:med25;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032570001~ phytochrome and flowering time regulatory protein (PFT1)~ med25~ complete;original_location=join(3426980..3427101%2C3427577..3427607%2C3428249..3428312%2C3428483..3428613%2C3429583..3429786%2C3429882..3429947%2C3430123..3430330%2C3431115..3431185%2C3431290..3432111%2C3432666..3432719%2C3432965..3432993%2C3433189..3433257%2C3433389..3433473%2C3433770..3433856%2C3433975..3434439);owner=coffea | |
| 66220 chr11 manual_curation exon 27915565 27915830 . - . Parent=GSCOCT00032570001 | |
| 66221 chr11 manual_curation exon 27915059 27915089 . - . Parent=GSCOCT00032570001 | |
| 66222 chr11 manual_curation exon 27914354 27914417 . - . Parent=GSCOCT00032570001 | |
| 66223 chr11 manual_curation exon 27914053 27914183 . - . Parent=GSCOCT00032570001 | |
| 66224 chr11 manual_curation exon 27912880 27913083 . - . Parent=GSCOCT00032570001 | |
| 66225 chr11 manual_curation exon 27912719 27912784 . - . Parent=GSCOCT00032570001 | |
| 66226 chr11 manual_curation exon 27912336 27912543 . - . Parent=GSCOCT00032570001 | |
| 66227 chr11 manual_curation exon 27911481 27911551 . - . Parent=GSCOCT00032570001 | |
| 66228 chr11 manual_curation exon 27910555 27911376 . - . Parent=GSCOCT00032570001 | |
| 66229 chr11 manual_curation exon 27909947 27910000 . - . Parent=GSCOCT00032570001 | |
| 66230 chr11 manual_curation exon 27909673 27909701 . - . Parent=GSCOCT00032570001 | |
| 66231 chr11 manual_curation exon 27909409 27909477 . - . Parent=GSCOCT00032570001 | |
| 66232 chr11 manual_curation exon 27909193 27909277 . - . Parent=GSCOCT00032570001 | |
| 66233 chr11 manual_curation exon 27908810 27908896 . - . Parent=GSCOCT00032570001 | |
| 66234 chr11 manual_curation exon 27907830 27908691 . - . Parent=GSCOCT00032570001 | |
| 66235 chr11 manual_curation CDS 27915565 27915686 . - 0 Parent=GSCOCT00032570001 | |
| 66236 chr11 manual_curation CDS 27915059 27915089 . - 2 Parent=GSCOCT00032570001 | |
| 66237 chr11 manual_curation CDS 27914354 27914417 . - 0 Parent=GSCOCT00032570001 | |
| 66238 chr11 manual_curation CDS 27914053 27914183 . - 1 Parent=GSCOCT00032570001 | |
| 66239 chr11 manual_curation CDS 27912880 27913083 . - 0 Parent=GSCOCT00032570001 | |
| 66240 chr11 manual_curation CDS 27912719 27912784 . - 0 Parent=GSCOCT00032570001 | |
| 66241 chr11 manual_curation CDS 27912336 27912543 . - 0 Parent=GSCOCT00032570001 | |
| 66242 chr11 manual_curation CDS 27911481 27911551 . - 1 Parent=GSCOCT00032570001 | |
| 66243 chr11 manual_curation CDS 27910555 27911376 . - 0 Parent=GSCOCT00032570001 | |
| 66244 chr11 manual_curation CDS 27909947 27910000 . - 0 Parent=GSCOCT00032570001 | |
| 66245 chr11 manual_curation CDS 27909673 27909701 . - 0 Parent=GSCOCT00032570001 | |
| 66246 chr11 manual_curation CDS 27909409 27909477 . - 2 Parent=GSCOCT00032570001 | |
| 66247 chr11 manual_curation CDS 27909193 27909277 . - 2 Parent=GSCOCT00032570001 | |
| 66248 chr11 manual_curation CDS 27908810 27908896 . - 0 Parent=GSCOCT00032570001 | |
| 66249 chr11 manual_curation CDS 27908227 27908691 . - 0 Parent=GSCOCT00032570001 | |
| 66250 chr11 manual_curation gene 27917866 27921215 . + . ID=GSCOCG00032569001;Name=Cc11_g10500 | |
| 66251 chr11 manual_curation mRNA 27917866 27921215 . + . ID=GSCOCT00032569001;Parent=GSCOCG00032569001;Name=Cc11_g10500 | |
| 66252 chr11 manual_curation polypeptide 27917866 27921215 . + . ID=GSCOCP00032569001;Dbxref=InterPro:IPR004328,PFAM:PF03097,PROFILE:PS51180,TAIR:AT1G13310.1,TrEMBL:B9ST34,TrEMBL:D7T985,TrEMBL:I1JDV7;Derives_from=GSCOCT00032569001;Name=Cc11_g10500;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Endosomal targeting BRO1-like domain-containing protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032569001~ Putative Endosomal targeting BRO1-like domain-containing protein~ unknown_gene~ complete;original_location=complement(join(3424756..3424800%2C3423634..3423801%2C3423129..3423390%2C3422877..3423043%2C3422561..3422710%2C3421451..3421801));owner=coffea | |
| 66253 chr11 manual_curation exon 27920865 27921215 . + . Parent=GSCOCT00032569001 | |
| 66254 chr11 manual_curation exon 27919956 27920105 . + . Parent=GSCOCT00032569001 | |
| 66255 chr11 manual_curation exon 27919623 27919789 . + . Parent=GSCOCT00032569001 | |
| 66256 chr11 manual_curation exon 27919276 27919537 . + . Parent=GSCOCT00032569001 | |
| 66257 chr11 manual_curation exon 27918865 27919032 . + . Parent=GSCOCT00032569001 | |
| 66258 chr11 manual_curation exon 27917866 27917910 . + . Parent=GSCOCT00032569001 | |
| 66259 chr11 manual_curation CDS 27920865 27921215 . + 0 Parent=GSCOCT00032569001 | |
| 66260 chr11 manual_curation CDS 27919956 27920105 . + 0 Parent=GSCOCT00032569001 | |
| 66261 chr11 manual_curation CDS 27919623 27919789 . + 1 Parent=GSCOCT00032569001 | |
| 66262 chr11 manual_curation CDS 27919276 27919537 . + 0 Parent=GSCOCT00032569001 | |
| 66263 chr11 manual_curation CDS 27918865 27919032 . + 0 Parent=GSCOCT00032569001 | |
| 66264 chr11 manual_curation CDS 27917866 27917910 . + 0 Parent=GSCOCT00032569001 | |
| 66265 chr11 manual_curation gene 27922229 27926619 . + . ID=GSCOCG00032568001;Name=Cc11_g10510 | |
| 66266 chr11 manual_curation mRNA 27922229 27926619 . + . ID=GSCOCT00032568001;Parent=GSCOCG00032568001;Name=Cc11_g10510 | |
| 66267 chr11 manual_curation polypeptide 27922446 27926348 . + . ID=GSCOCP00032568001;Dbxref=TAIR:AT1G29700.1,TrEMBL:B9HIZ8,TrEMBL:B9ST35,TrEMBL:D7T986;Derives_from=GSCOCT00032568001;Name=Cc11_g10510;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Metallo-hydrolase/oxidoreductase superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032568001~ Metallo-hydrolase/oxidoreductase superfamily protein~ unknown_gene~ complete;original_location=complement(join(3420069..3420220%2C3419874..3419967%2C3419656..3419781%2C3419355..3419513%2C3418288..3418406%2C3418017..3418208%2C3417740..3417830%2C3416318..3416398));owner=coffea | |
| 66268 chr11 manual_curation exon 27926268 27926619 . + . Parent=GSCOCT00032568001 | |
| 66269 chr11 manual_curation exon 27924836 27924926 . + . Parent=GSCOCT00032568001 | |
| 66270 chr11 manual_curation exon 27924458 27924649 . + . Parent=GSCOCT00032568001 | |
| 66271 chr11 manual_curation exon 27924260 27924378 . + . Parent=GSCOCT00032568001 | |
| 66272 chr11 manual_curation exon 27923153 27923311 . + . Parent=GSCOCT00032568001 | |
| 66273 chr11 manual_curation exon 27922885 27923010 . + . Parent=GSCOCT00032568001 | |
| 66274 chr11 manual_curation exon 27922699 27922792 . + . Parent=GSCOCT00032568001 | |
| 66275 chr11 manual_curation exon 27922229 27922597 . + . Parent=GSCOCT00032568001 | |
| 66276 chr11 manual_curation CDS 27926268 27926348 . + 0 Parent=GSCOCT00032568001 | |
| 66277 chr11 manual_curation CDS 27924836 27924926 . + 2 Parent=GSCOCT00032568001 | |
| 66278 chr11 manual_curation CDS 27924458 27924649 . + 2 Parent=GSCOCT00032568001 | |
| 66279 chr11 manual_curation CDS 27924260 27924378 . + 0 Parent=GSCOCT00032568001 | |
| 66280 chr11 manual_curation CDS 27923153 27923311 . + 0 Parent=GSCOCT00032568001 | |
| 66281 chr11 manual_curation CDS 27922885 27923010 . + 0 Parent=GSCOCT00032568001 | |
| 66282 chr11 manual_curation CDS 27922699 27922792 . + 2 Parent=GSCOCT00032568001 | |
| 66283 chr11 manual_curation CDS 27922446 27922597 . + 0 Parent=GSCOCT00032568001 | |
| 66284 chr11 manual_curation gene 27931927 27934947 . - . ID=GSCOCG00032567001;Name=Cc11_g10520 | |
| 66285 chr11 manual_curation mRNA 27931927 27934947 . - . ID=GSCOCT00032567001;Parent=GSCOCG00032567001;Name=Cc11_g10520 | |
| 66286 chr11 manual_curation polypeptide 27932175 27934436 . - . ID=GSCOCP00032567001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR006447,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR014778,InterPro:IPR017930,PFAM:PF00249,PROFILE:PS51294,SUPERFAMILY:SSF46689,SwissProt:Q940D0,SwissProt:Q9FGT7,SwissProt:Q9M9B9,TAIR:AT1G13300.1,TAIR:AT1G25550.1,TAIR:AT1G68670.1,TIGRFAMs:TIGR01557,TrEMBL:B9HIZ7,TrEMBL:B9ST36,TrEMBL:D7T987;Derives_from=GSCOCT00032567001;Name=Cc11_g10520;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:myb-like transcription factor family protein,CC_functional_completeness:complete,CC_gene:ARR19,CC_gene:ARR18,CC_gene:ARR1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032567001~ myb-like transcription factor family protein~ ARR19~ complete;original_location=join(3408230..3408332%2C3408448..3408761%2C3408873..3409200%2C3409304..3409380%2C3410135..3410491);owner=coffea | |
| 66287 chr11 manual_curation exon 27934334 27934947 . - . Parent=GSCOCT00032567001 | |
| 66288 chr11 manual_curation exon 27933905 27934218 . - . Parent=GSCOCT00032567001 | |
| 66289 chr11 manual_curation exon 27933466 27933793 . - . Parent=GSCOCT00032567001 | |
| 66290 chr11 manual_curation exon 27933286 27933362 . - . Parent=GSCOCT00032567001 | |
| 66291 chr11 manual_curation exon 27931927 27932531 . - . Parent=GSCOCT00032567001 | |
| 66292 chr11 manual_curation CDS 27934334 27934436 . - 0 Parent=GSCOCT00032567001 | |
| 66293 chr11 manual_curation CDS 27933905 27934218 . - 1 Parent=GSCOCT00032567001 | |
| 66294 chr11 manual_curation CDS 27933466 27933793 . - 0 Parent=GSCOCT00032567001 | |
| 66295 chr11 manual_curation CDS 27933286 27933362 . - 1 Parent=GSCOCT00032567001 | |
| 66296 chr11 manual_curation CDS 27932175 27932531 . - 0 Parent=GSCOCT00032567001 | |
| 66297 chr11 manual_curation gene 27948870 27949978 . + . ID=GSCOCG00032565001;Name=Cc11_g10530 | |
| 66298 chr11 manual_curation mRNA 27948870 27949978 . + . ID=GSCOCT00032565001;Parent=GSCOCG00032565001;Name=Cc11_g10530 | |
| 66299 chr11 manual_curation polypeptide 27948870 27949978 . + . ID=GSCOCP00032565001;Dbxref=InterPro:IPR007087,InterPro:IPR015880,PROFILE:PS50157,PROSITE:PS00028,SMART:SM00355,SwissProt:Q8VWG3,SwissProt:Q943I6,SwissProt:Q9C8N5,TAIR:AT1G13290.1,TAIR:AT3G20880.1,TAIR:AT3G57670.1,TrEMBL:D7T988,TrEMBL:G7JYA5,TrEMBL:Q9FX68;Derives_from=GSCOCT00032565001;Name=Cc11_g10530;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:C2H2-like zinc finger protein,CC_functional_completeness:fragment,CC_gene:TT1,CC_gene:STOP1,CC_gene:Os01g0871200;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032565001~ C2H2-like zinc finger protein~ TT1~ fragment;original_location=complement(join(3393383..3393796%2C3392688..3393131));owner=coffea | |
| 66300 chr11 manual_curation exon 27949535 27949978 . + . Parent=GSCOCT00032565001 | |
| 66301 chr11 manual_curation exon 27948870 27949283 . + . Parent=GSCOCT00032565001 | |
| 66302 chr11 manual_curation CDS 27949535 27949978 . + 0 Parent=GSCOCT00032565001 | |
| 66303 chr11 manual_curation CDS 27948870 27949283 . + 0 Parent=GSCOCT00032565001 | |
| 66304 chr11 manual_curation gene 27952352 27953758 . - . ID=GSCOCG00032564001;Name=Cc11_g10540 | |
| 66305 chr11 manual_curation mRNA 27952352 27953758 . - . ID=GSCOCT00032564001;Parent=GSCOCG00032564001;Name=Cc11_g10540 | |
| 66306 chr11 manual_curation polypeptide 27952563 27953588 . - . ID=GSCOCP00032564001;Dbxref=InterPro:IPR009410,PFAM:PF06351,PRODOM:PD329160,SwissProt:Q93ZC5,SwissProt:Q9LS01,SwissProt:Q9LS02,TAIR:AT1G13280.1,TAIR:AT3G25770.1,TAIR:AT3G25780.1,TrEMBL:B9HIZ4,TrEMBL:F6KBT2,TrEMBL:Q711Q9;Derives_from=GSCOCT00032564001;Name=Cc11_g10540;Ontology_term=CC_evidence_code:ISS,GO:0009507,GO:0016853,CC_EC_number:5.3.99.6,PRODUCT:Allene oxide cyclase 4%2C chloroplastic,CC_functional_completeness:complete,CC_gene:AOC4,CC_gene:AOC3,CC_gene:AOC2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032564001~ Allene oxide cyclase 4%2C chloroplastic~ AOC4~ complete;original_location=join(3389078..3389312%2C3389580..3390103);owner=coffea | |
| 66307 chr11 manual_curation exon 27953354 27953758 . - . Parent=GSCOCT00032564001 | |
| 66308 chr11 manual_curation exon 27952352 27953086 . - . Parent=GSCOCT00032564001 | |
| 66309 chr11 manual_curation CDS 27953354 27953588 . - 0 Parent=GSCOCT00032564001 | |
| 66310 chr11 manual_curation CDS 27952563 27953086 . - 1 Parent=GSCOCT00032564001 | |
| 66311 chr11 manual_curation gene 27953951 27960375 . - . ID=GSCOCG00032563001;Name=Cc11_g10550 | |
| 66312 chr11 manual_curation mRNA 27953951 27960375 . - . ID=GSCOCT00032563001;Parent=GSCOCG00032563001;Name=Cc11_g10550 | |
| 66313 chr11 manual_curation polypeptide 27954478 27960375 . - . ID=GSCOCP00032563001;Dbxref=GENE3D:G3DSA:3.90.230.10,InterPro:IPR000994,InterPro:IPR001714,InterPro:IPR002467,PANTHER:PTHR10804,PANTHER:PTHR10804:SF13,PFAM:PF00557,PRINTS:PR00599,PROSITE:PS00680,SUPERFAMILY:SSF55920,SwissProt:Q9FV50,SwissProt:Q9FV51,SwissProt:Q9FV52,TAIR:AT1G13270.1,TAIR:AT3G25740.1,TAIR:AT4G37040.1,TIGRFAMs:TIGR00500,TrEMBL:B9SEJ2,TrEMBL:G7JY96,TrEMBL:I1JDW5;Derives_from=GSCOCT00032563001;Name=Cc11_g10550;Ontology_term=CC_evidence_code:ISS,GO:0004177,GO:0006508,GO:0008235,GO:0009987,CC_EC_number:3.4.11.18,PRODUCT:Methionine aminopeptidase 1B%2C chloroplastic,CC_functional_completeness:complete,CC_gene:MAP1B,CC_gene:MAP1C,CC_gene:MAP1D;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032563001~ Methionine aminopeptidase 1B%2C chloroplastic~ MAP1B~ complete;original_location=join(3382291..3382450%2C3382682..3382763%2C3383463..3383700%2C3384587..3384748%2C3384829..3384870%2C3385377..3385448%2C3385642..3385721%2C3386304..3386401%2C3387355..3387402%2C3388043..3388188);owner=coffea | |
| 66314 chr11 manual_curation exon 27960216 27960375 . - . Parent=GSCOCT00032563001 | |
| 66315 chr11 manual_curation exon 27959903 27959984 . - . Parent=GSCOCT00032563001 | |
| 66316 chr11 manual_curation exon 27958966 27959203 . - . Parent=GSCOCT00032563001 | |
| 66317 chr11 manual_curation exon 27957918 27958079 . - . Parent=GSCOCT00032563001 | |
| 66318 chr11 manual_curation exon 27957796 27957837 . - . Parent=GSCOCT00032563001 | |
| 66319 chr11 manual_curation exon 27957218 27957289 . - . Parent=GSCOCT00032563001 | |
| 66320 chr11 manual_curation exon 27956945 27957024 . - . Parent=GSCOCT00032563001 | |
| 66321 chr11 manual_curation exon 27956265 27956362 . - . Parent=GSCOCT00032563001 | |
| 66322 chr11 manual_curation exon 27955264 27955311 . - . Parent=GSCOCT00032563001 | |
| 66323 chr11 manual_curation exon 27953951 27954623 . - . Parent=GSCOCT00032563001 | |
| 66324 chr11 manual_curation CDS 27960216 27960375 . - 0 Parent=GSCOCT00032563001 | |
| 66325 chr11 manual_curation CDS 27959903 27959984 . - 1 Parent=GSCOCT00032563001 | |
| 66326 chr11 manual_curation CDS 27958966 27959203 . - 2 Parent=GSCOCT00032563001 | |
| 66327 chr11 manual_curation CDS 27957918 27958079 . - 0 Parent=GSCOCT00032563001 | |
| 66328 chr11 manual_curation CDS 27957796 27957837 . - 0 Parent=GSCOCT00032563001 | |
| 66329 chr11 manual_curation CDS 27957218 27957289 . - 0 Parent=GSCOCT00032563001 | |
| 66330 chr11 manual_curation CDS 27956945 27957024 . - 0 Parent=GSCOCT00032563001 | |
| 66331 chr11 manual_curation CDS 27956265 27956362 . - 2 Parent=GSCOCT00032563001 | |
| 66332 chr11 manual_curation CDS 27955264 27955311 . - 1 Parent=GSCOCT00032563001 | |
| 66333 chr11 manual_curation CDS 27954478 27954623 . - 1 Parent=GSCOCT00032563001 | |
| 66334 chr11 manual_curation gene 27965326 27966906 . - . ID=GSCOCG00032561001;Name=Cc11_g10560 | |
| 66335 chr11 manual_curation mRNA 27965326 27966906 . - . ID=GSCOCT00032561001;Parent=GSCOCG00032561001;Name=Cc11_g10560 | |
| 66336 chr11 manual_curation polypeptide 27965326 27966462 . - . ID=GSCOCP00032561001;Dbxref=GENE3D:G3DSA:3.30.730.10,InterPro:IPR001471,InterPro:IPR003340,InterPro:IPR016177,PFAM:PF00847,PFAM:PF02362,PROFILE:PS50863,PROFILE:PS51032,SMART:SM00380,SUPERFAMILY:SSF54171,SwissProt:P82280,SwissProt:Q9C6M5,SwissProt:Q9ZWM9,TAIR:AT1G13260.1,TAIR:AT1G25560.1,TAIR:AT1G68840.1,TrEMBL:A5C258,TrEMBL:F6HFQ2,TrEMBL:I0B670;Derives_from=GSCOCT00032561001;Name=Cc11_g10560;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,CC_EC_number:missing_EC_number,PRODUCT:AP2/ERF and B3 domain-containing transcription repressor TEM1,CC_functional_completeness:complete,CC_gene:TEM1,CC_gene:RAV1,CC_gene:RAV2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032561001~ AP2/ERF and B3 domain-containing transcription repressor TEM1~ TEM1~ complete;original_location=3376204..3377340;owner=coffea | |
| 66337 chr11 manual_curation exon 27965326 27966906 . - . Parent=GSCOCT00032561001 | |
| 66338 chr11 manual_curation CDS 27965326 27966462 . - 0 Parent=GSCOCT00032561001 | |
| 66339 chr11 manual_curation gene 27982792 27991418 . - . ID=GSCOCG00032560001;Name=Cc11_g10570 | |
| 66340 chr11 manual_curation mRNA 27982792 27991418 . - . ID=GSCOCT00032560001;Parent=GSCOCG00032560001;Name=Cc11_g10570 | |
| 66341 chr11 manual_curation polypeptide 27983398 27991152 . - . ID=GSCOCP00032560001;Dbxref=InterPro:IPR001611,InterPro:IPR021720,PFAM:PF00560,PFAM:PF11721,SwissProt:Q9FZB1,SwissProt:Q9FZB8,SwissProt:Q9ZQQ7,TAIR:AT1G25570.1,TAIR:AT1G28340.1,TAIR:AT3G19230.1,TrEMBL:D7T992,TrEMBL:G7JX54,TrEMBL:I1NHL4;Derives_from=GSCOCT00032560001;Name=Cc11_g10570;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440,CC_functional_completeness:fragment,CC_gene:At2g14440,CC_gene:At1g51880,CC_gene:At1g51810;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032560001~ Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440~ At2g14440~ fragment;original_location=join(3351514..3351598%2C3351725..3352795%2C3353233..3353383%2C3354416..3354487%2C3355106..3355174%2C3355497..3355565%2C3356210..3356287%2C3358244..3358449%2C3359162..3359268);owner=coffea | |
| 66342 chr11 manual_curation exon 27991068 27991418 . - . Parent=GSCOCT00032560001 | |
| 66343 chr11 manual_curation exon 27989871 27990941 . - . Parent=GSCOCT00032560001 | |
| 66344 chr11 manual_curation exon 27989283 27989433 . - . Parent=GSCOCT00032560001 | |
| 66345 chr11 manual_curation exon 27988179 27988250 . - . Parent=GSCOCT00032560001 | |
| 66346 chr11 manual_curation exon 27987492 27987560 . - . Parent=GSCOCT00032560001 | |
| 66347 chr11 manual_curation exon 27987101 27987169 . - . Parent=GSCOCT00032560001 | |
| 66348 chr11 manual_curation exon 27986379 27986456 . - . Parent=GSCOCT00032560001 | |
| 66349 chr11 manual_curation exon 27984217 27984422 . - . Parent=GSCOCT00032560001 | |
| 66350 chr11 manual_curation exon 27982792 27983504 . - . Parent=GSCOCT00032560001 | |
| 66351 chr11 manual_curation CDS 27991068 27991152 . - 0 Parent=GSCOCT00032560001 | |
| 66352 chr11 manual_curation CDS 27989871 27990941 . - 1 Parent=GSCOCT00032560001 | |
| 66353 chr11 manual_curation CDS 27989283 27989433 . - 1 Parent=GSCOCT00032560001 | |
| 66354 chr11 manual_curation CDS 27988179 27988250 . - 2 Parent=GSCOCT00032560001 | |
| 66355 chr11 manual_curation CDS 27987492 27987560 . - 2 Parent=GSCOCT00032560001 | |
| 66356 chr11 manual_curation CDS 27987101 27987169 . - 2 Parent=GSCOCT00032560001 | |
| 66357 chr11 manual_curation CDS 27986379 27986456 . - 2 Parent=GSCOCT00032560001 | |
| 66358 chr11 manual_curation CDS 27984217 27984422 . - 2 Parent=GSCOCT00032560001 | |
| 66359 chr11 manual_curation CDS 27983398 27983504 . - 1 Parent=GSCOCT00032560001 | |
| 66360 chr11 manual_curation gene 28005834 28006883 . + . ID=GSCOCG00032559001;Name=Cc11_g10580 | |
| 66361 chr11 manual_curation mRNA 28005834 28006883 . + . ID=GSCOCT00032559001;Parent=GSCOCG00032559001;Name=Cc11_g10580 | |
| 66362 chr11 manual_curation polypeptide 28005834 28006883 . + . ID=GSCOCP00032559001;Dbxref=InterPro:IPR002495,PFAM:PF01501,SwissProt:O04253,SwissProt:Q0V7R1,SwissProt:Q9M8J2,TAIR:AT1G13250.1,TAIR:AT3G06260.1,TAIR:AT4G02130.1,TrEMBL:B9HIY9,TrEMBL:B9HWL9,TrEMBL:F6HF08;Derives_from=GSCOCT00032559001;Name=Cc11_g10580;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Probable galacturonosyltransferase-like 3,CC_functional_completeness:complete,CC_gene:GATL3,CC_gene:GATL4,CC_gene:GATL6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032559001~ Probable galacturonosyltransferase-like 3~ GATL3~ complete;original_location=complement(3335783..3336832);owner=coffea | |
| 66363 chr11 manual_curation exon 28005834 28006883 . + . Parent=GSCOCT00032559001 | |
| 66364 chr11 manual_curation CDS 28005834 28006883 . + 0 Parent=GSCOCT00032559001 | |
| 66365 chr11 manual_curation gene 28006992 28007439 . - . ID=GSCOCG00032558001;Name=Cc11_g10590 | |
| 66366 chr11 manual_curation mRNA 28006992 28007439 . - . ID=GSCOCT00032558001;Parent=GSCOCG00032558001;Name=Cc11_g10590 | |
| 66367 chr11 manual_curation polypeptide 28006992 28007156 . - . ID=GSCOCP00032558001;Derives_from=GSCOCT00032558001;Name=Cc11_g10590;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032558001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=3335510..3335674;owner=coffea | |
| 66368 chr11 manual_curation exon 28006992 28007439 . - . Parent=GSCOCT00032558001 | |
| 66369 chr11 manual_curation CDS 28006992 28007156 . - 0 Parent=GSCOCT00032558001 | |
| 66370 chr11 manual_curation gene 28008772 28015146 . + . ID=GSCOCG00032557001;Name=Cc11_g10600 | |
| 66371 chr11 manual_curation mRNA 28008772 28015146 . + . ID=GSCOCT00032557001;Parent=GSCOCG00032557001;Name=Cc11_g10600 | |
| 66372 chr11 manual_curation polypeptide 28009214 28014573 . + . ID=GSCOCP00032557001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q84V18,SwissProt:Q9LZV4,SwissProt:Q9S713,TAIR:AT1G68830.1,TAIR:AT2G38620.2,TAIR:AT5G01920.1,TrEMBL:F6HF12,TrEMBL:G7JX40,TrEMBL:I1JDX0;Derives_from=GSCOCT00032557001;Name=Cc11_g10600;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.23,PRODUCT:Serine/threonine-protein kinase STN7%2C chloroplastic,CC_functional_completeness:complete,CC_gene:STN7,CC_gene:STT7,CC_gene:STN8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032557001~ Serine/threonine-protein kinase STN7%2C chloroplastic~ STN7~ complete;original_location=complement(join(3333261..3333452%2C3333081..3333167%2C3332580..3332699%2C3332383..3332481%2C3330775..3330943%2C3330567..3330660%2C3329395..3329488%2C3329247..3329303%2C3328336..3328749%2C3328093..3328254));owner=coffea | |
| 66373 chr11 manual_curation exon 28014412 28015146 . + . Parent=GSCOCT00032557001 | |
| 66374 chr11 manual_curation exon 28013917 28014330 . + . Parent=GSCOCT00032557001 | |
| 66375 chr11 manual_curation exon 28013363 28013419 . + . Parent=GSCOCT00032557001 | |
| 66376 chr11 manual_curation exon 28013178 28013271 . + . Parent=GSCOCT00032557001 | |
| 66377 chr11 manual_curation exon 28012006 28012099 . + . Parent=GSCOCT00032557001 | |
| 66378 chr11 manual_curation exon 28011723 28011891 . + . Parent=GSCOCT00032557001 | |
| 66379 chr11 manual_curation exon 28010185 28010283 . + . Parent=GSCOCT00032557001 | |
| 66380 chr11 manual_curation exon 28009967 28010086 . + . Parent=GSCOCT00032557001 | |
| 66381 chr11 manual_curation exon 28009499 28009585 . + . Parent=GSCOCT00032557001 | |
| 66382 chr11 manual_curation exon 28008772 28009405 . + . Parent=GSCOCT00032557001 | |
| 66383 chr11 manual_curation CDS 28014412 28014573 . + 0 Parent=GSCOCT00032557001 | |
| 66384 chr11 manual_curation CDS 28013917 28014330 . + 0 Parent=GSCOCT00032557001 | |
| 66385 chr11 manual_curation CDS 28013363 28013419 . + 0 Parent=GSCOCT00032557001 | |
| 66386 chr11 manual_curation CDS 28013178 28013271 . + 2 Parent=GSCOCT00032557001 | |
| 66387 chr11 manual_curation CDS 28012006 28012099 . + 1 Parent=GSCOCT00032557001 | |
| 66388 chr11 manual_curation CDS 28011723 28011891 . + 0 Parent=GSCOCT00032557001 | |
| 66389 chr11 manual_curation CDS 28010185 28010283 . + 0 Parent=GSCOCT00032557001 | |
| 66390 chr11 manual_curation CDS 28009967 28010086 . + 0 Parent=GSCOCT00032557001 | |
| 66391 chr11 manual_curation CDS 28009499 28009585 . + 0 Parent=GSCOCT00032557001 | |
| 66392 chr11 manual_curation CDS 28009214 28009405 . + 0 Parent=GSCOCT00032557001 | |
| 66393 chr11 manual_curation gene 28029242 28034239 . - . ID=GSCOCG00032554001;Name=Cc11_g10610 | |
| 66394 chr11 manual_curation mRNA 28029242 28034239 . - . ID=GSCOCT00032554001;Parent=GSCOCG00032554001;Name=Cc11_g10610 | |
| 66395 chr11 manual_curation polypeptide 28029516 28033965 . - . ID=GSCOCP00032554001;Dbxref=InterPro:IPR003441,PFAM:PF02365,PROFILE:PS51005,SUPERFAMILY:SSF101941,SwissProt:Q39013,SwissProt:Q6NQK2,TAIR:AT1G25580.1,TAIR:AT3G01600.1,TAIR:AT5G14490.1,TrEMBL:B9HIY7,TrEMBL:B9HWM0,TrEMBL:D7T997;Derives_from=GSCOCT00032554001;Name=Cc11_g10610;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:NAC domain-containing protein 8,CC_functional_completeness:complete,CC_gene:NAC008,CC_gene:NAC002;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032554001~ NAC domain-containing protein 8~ NAC008~ complete;original_location=join(3308701..3308708%2C3310679..3310820%2C3311409..3311595%2C3311698..3312179%2C3312502..3312906%2C3313025..3313150);owner=coffea | |
| 66396 chr11 manual_curation exon 28033958 28034239 . - . Parent=GSCOCT00032554001 | |
| 66397 chr11 manual_curation exon 28031846 28031987 . - . Parent=GSCOCT00032554001 | |
| 66398 chr11 manual_curation exon 28031071 28031257 . - . Parent=GSCOCT00032554001 | |
| 66399 chr11 manual_curation exon 28030487 28030968 . - . Parent=GSCOCT00032554001 | |
| 66400 chr11 manual_curation exon 28029760 28030164 . - . Parent=GSCOCT00032554001 | |
| 66401 chr11 manual_curation exon 28029242 28029641 . - . Parent=GSCOCT00032554001 | |
| 66402 chr11 manual_curation CDS 28033958 28033965 . - 0 Parent=GSCOCT00032554001 | |
| 66403 chr11 manual_curation CDS 28031846 28031987 . - 2 Parent=GSCOCT00032554001 | |
| 66404 chr11 manual_curation CDS 28031071 28031257 . - 0 Parent=GSCOCT00032554001 | |
| 66405 chr11 manual_curation CDS 28030487 28030968 . - 1 Parent=GSCOCT00032554001 | |
| 66406 chr11 manual_curation CDS 28029760 28030164 . - 0 Parent=GSCOCT00032554001 | |
| 66407 chr11 manual_curation CDS 28029516 28029641 . - 0 Parent=GSCOCT00032554001 | |
| 66408 chr11 manual_curation gene 28037508 28045084 . + . ID=GSCOCG00032553001;Name=Cc11_g10620 | |
| 66409 chr11 manual_curation mRNA 28037508 28045084 . + . ID=GSCOCT00032553001;Parent=GSCOCG00032553001;Name=Cc11_g10620 | |
| 66410 chr11 manual_curation polypeptide 28037508 28044396 . + . ID=GSCOCP00032553001;Dbxref=InterPro:IPR012890,InterPro:IPR022783,PANTHER:PTHR12214,PFAM:PF07842,SwissProt:P16383,SwissProt:P58501,SwissProt:Q9Y5B6,TAIR:AT5G08550.1,TAIR:AT5G09210.1,TrEMBL:B9RGK2,TrEMBL:G7K6F2,TrEMBL:I1NDJ9;Derives_from=GSCOCT00032553001;Name=Cc11_g10620;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,GO:0005634,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:GC-rich sequence DNA-binding factor-like protein,CC_functional_completeness:complete,CC_gene:GCFC1,CC_gene:Gcfc1,CC_gene:GCFC2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032553001~ GC-rich sequence DNA-binding factor-like protein~ GCFC1~ complete;original_location=complement(join(3303881..3305158%2C3303351..3303518%2C3300993..3301672%2C3299916..3300174%2C3299523..3299812%2C3298270..3298462));owner=coffea | |
| 66411 chr11 manual_curation exon 28044204 28045084 . + . Parent=GSCOCT00032553001 | |
| 66412 chr11 manual_curation exon 28042854 28043143 . + . Parent=GSCOCT00032553001 | |
| 66413 chr11 manual_curation exon 28042492 28042750 . + . Parent=GSCOCT00032553001 | |
| 66414 chr11 manual_curation exon 28040994 28041673 . + . Parent=GSCOCT00032553001 | |
| 66415 chr11 manual_curation exon 28039148 28039315 . + . Parent=GSCOCT00032553001 | |
| 66416 chr11 manual_curation exon 28037508 28038785 . + . Parent=GSCOCT00032553001 | |
| 66417 chr11 manual_curation CDS 28044204 28044396 . + 2 Parent=GSCOCT00032553001 | |
| 66418 chr11 manual_curation CDS 28042854 28043143 . + 0 Parent=GSCOCT00032553001 | |
| 66419 chr11 manual_curation CDS 28042492 28042750 . + 2 Parent=GSCOCT00032553001 | |
| 66420 chr11 manual_curation CDS 28040994 28041673 . + 0 Parent=GSCOCT00032553001 | |
| 66421 chr11 manual_curation CDS 28039148 28039315 . + 0 Parent=GSCOCT00032553001 | |
| 66422 chr11 manual_curation CDS 28037508 28038785 . + 0 Parent=GSCOCT00032553001 | |
| 66423 chr11 manual_curation gene 28049620 28052832 . + . ID=GSCOCG00032552001;Name=Cc11_g10630 | |
| 66424 chr11 manual_curation mRNA 28049620 28052832 . + . ID=GSCOCT00032552001;Parent=GSCOCG00032552001;Name=Cc11_g10630 | |
| 66425 chr11 manual_curation polypeptide 28049716 28052740 . + . ID=GSCOCP00032552001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR008030,InterPro:IPR016040,PFAM:PF05368,SwissProt:P52577,SwissProt:P52579,SwissProt:Q84V83,TAIR:AT1G75280.1,TAIR:AT1G75290.1,TAIR:AT4G39230.1,TrEMBL:C6L1M5,TrEMBL:E4W4T1,TrEMBL:I1E425;Derives_from=GSCOCT00032552001;Name=Cc11_g10630;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,CC_EC_number:1.17.1.3,PRODUCT:Leucoanthocyanidin reductase,CC_functional_completeness:complete,CC_gene:LAR,CC_gene:At1g75280;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032552001~ Leucoanthocyanidin reductase~ LAR~ complete;original_location=complement(join(3292741..3292950%2C3292590..3292649%2C3291921..3292061%2C3291508..3291745%2C3290283..3290486%2C3289926..3290191));owner=coffea | |
| 66426 chr11 manual_curation exon 28052475 28052832 . + . Parent=GSCOCT00032552001 | |
| 66427 chr11 manual_curation exon 28052180 28052383 . + . Parent=GSCOCT00032552001 | |
| 66428 chr11 manual_curation exon 28050921 28051158 . + . Parent=GSCOCT00032552001 | |
| 66429 chr11 manual_curation exon 28050605 28050745 . + . Parent=GSCOCT00032552001 | |
| 66430 chr11 manual_curation exon 28050017 28050076 . + . Parent=GSCOCT00032552001 | |
| 66431 chr11 manual_curation exon 28049620 28049925 . + . Parent=GSCOCT00032552001 | |
| 66432 chr11 manual_curation CDS 28052475 28052740 . + 1 Parent=GSCOCT00032552001 | |
| 66433 chr11 manual_curation CDS 28052180 28052383 . + 1 Parent=GSCOCT00032552001 | |
| 66434 chr11 manual_curation CDS 28050921 28051158 . + 0 Parent=GSCOCT00032552001 | |
| 66435 chr11 manual_curation CDS 28050605 28050745 . + 0 Parent=GSCOCT00032552001 | |
| 66436 chr11 manual_curation CDS 28050017 28050076 . + 0 Parent=GSCOCT00032552001 | |
| 66437 chr11 manual_curation CDS 28049716 28049925 . + 0 Parent=GSCOCT00032552001 | |
| 66438 chr11 manual_curation gene 28052927 28061619 . - . ID=GSCOCG00032551001;Name=Cc11_g10640 | |
| 66439 chr11 manual_curation mRNA 28052927 28061619 . - . ID=GSCOCT00032551001;Parent=GSCOCG00032551001;Name=Cc11_g10640 | |
| 66440 chr11 manual_curation polypeptide 28053533 28061426 . - . ID=GSCOCP00032551001;Dbxref=InterPro:IPR001841,InterPro:IPR019396,PFAM:PF10269,PROFILE:PS50089,TAIR:AT1G18470.1,TAIR:AT1G68820.1,TAIR:AT1G73950.1,TrEMBL:D7KWV2,TrEMBL:D7T9A1,TrEMBL:Q94K50;Derives_from=GSCOCT00032551001;Name=Cc11_g10640;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Transmembrane Fragile-X-F-associated protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032551001~ Transmembrane Fragile-X-F-associated protein~ unknown_gene~ complete;original_location=join(3281240..3281355%2C3282465..3282555%2C3282669..3282753%2C3283377..3283446%2C3283722..3283791%2C3284076..3284145%2C3285022..3285067%2C3285155..3285404%2C3285481..3285686%2C3285794..3285868%2C3287263..3287323%2C3287469..3287549%2C3288311..3288390%2C3289055..3289133);owner=coffea | |
| 66441 chr11 manual_curation exon 28061311 28061619 . - . Parent=GSCOCT00032551001 | |
| 66442 chr11 manual_curation exon 28060111 28060201 . - . Parent=GSCOCT00032551001 | |
| 66443 chr11 manual_curation exon 28059913 28059997 . - . Parent=GSCOCT00032551001 | |
| 66444 chr11 manual_curation exon 28059220 28059289 . - . Parent=GSCOCT00032551001 | |
| 66445 chr11 manual_curation exon 28058875 28058944 . - . Parent=GSCOCT00032551001 | |
| 66446 chr11 manual_curation exon 28058521 28058590 . - . Parent=GSCOCT00032551001 | |
| 66447 chr11 manual_curation exon 28057599 28057644 . - . Parent=GSCOCT00032551001 | |
| 66448 chr11 manual_curation exon 28057262 28057511 . - . Parent=GSCOCT00032551001 | |
| 66449 chr11 manual_curation exon 28056980 28057185 . - . Parent=GSCOCT00032551001 | |
| 66450 chr11 manual_curation exon 28056798 28056872 . - . Parent=GSCOCT00032551001 | |
| 66451 chr11 manual_curation exon 28055343 28055403 . - . Parent=GSCOCT00032551001 | |
| 66452 chr11 manual_curation exon 28055117 28055197 . - . Parent=GSCOCT00032551001 | |
| 66453 chr11 manual_curation exon 28054276 28054355 . - . Parent=GSCOCT00032551001 | |
| 66454 chr11 manual_curation exon 28052927 28053611 . - . Parent=GSCOCT00032551001 | |
| 66455 chr11 manual_curation CDS 28061311 28061426 . - 0 Parent=GSCOCT00032551001 | |
| 66456 chr11 manual_curation CDS 28060111 28060201 . - 2 Parent=GSCOCT00032551001 | |
| 66457 chr11 manual_curation CDS 28059913 28059997 . - 0 Parent=GSCOCT00032551001 | |
| 66458 chr11 manual_curation CDS 28059220 28059289 . - 1 Parent=GSCOCT00032551001 | |
| 66459 chr11 manual_curation CDS 28058875 28058944 . - 2 Parent=GSCOCT00032551001 | |
| 66460 chr11 manual_curation CDS 28058521 28058590 . - 0 Parent=GSCOCT00032551001 | |
| 66461 chr11 manual_curation CDS 28057599 28057644 . - 1 Parent=GSCOCT00032551001 | |
| 66462 chr11 manual_curation CDS 28057262 28057511 . - 2 Parent=GSCOCT00032551001 | |
| 66463 chr11 manual_curation CDS 28056980 28057185 . - 0 Parent=GSCOCT00032551001 | |
| 66464 chr11 manual_curation CDS 28056798 28056872 . - 2 Parent=GSCOCT00032551001 | |
| 66465 chr11 manual_curation CDS 28055343 28055403 . - 2 Parent=GSCOCT00032551001 | |
| 66466 chr11 manual_curation CDS 28055117 28055197 . - 0 Parent=GSCOCT00032551001 | |
| 66467 chr11 manual_curation CDS 28054276 28054355 . - 0 Parent=GSCOCT00032551001 | |
| 66468 chr11 manual_curation CDS 28053533 28053611 . - 2 Parent=GSCOCT00032551001 | |
| 66469 chr11 manual_curation gene 28064551 28068189 . - . ID=GSCOCG00032550001;Name=Cc11_g10650 | |
| 66470 chr11 manual_curation mRNA 28064551 28068189 . - . ID=GSCOCT00032550001;Parent=GSCOCG00032550001;Name=Cc11_g10650 | |
| 66471 chr11 manual_curation polypeptide 28065659 28067452 . - . ID=GSCOCP00032550001;Dbxref=GENE3D:G3DSA:4.10.280.10,InterPro:IPR001092,InterPro:IPR011598,PFAM:PF00010,PROFILE:PS50888,SMART:SM00353,SUPERFAMILY:SSF47459,SwissProt:Q9LET0,SwissProt:Q9LS08,SwissProt:Q9S7Y1,TAIR:AT1G68810.1,TAIR:AT3G25710.1,TAIR:AT3G56770.1,TrEMBL:B9HIY4,TrEMBL:B9HWM2,TrEMBL:B9SEI3;Derives_from=GSCOCT00032550001;Name=Cc11_g10650;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0030528,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Transcription factor bHLH30,CC_functional_completeness:complete,CC_gene:BHLH30,CC_gene:BHLH32,CC_gene:BHLH107;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032550001~ Transcription factor bHLH30~ BHLH30~ complete;original_location=join(3275214..3275702%2C3276543..3277007);owner=coffea | |
| 66472 chr11 manual_curation exon 28067928 28068189 . - . Parent=GSCOCT00032550001 | |
| 66473 chr11 manual_curation exon 28066964 28067494 . - . Parent=GSCOCT00032550001 | |
| 66474 chr11 manual_curation exon 28064551 28066123 . - . Parent=GSCOCT00032550001 | |
| 66475 chr11 manual_curation CDS 28066964 28067452 . - 0 Parent=GSCOCT00032550001 | |
| 66476 chr11 manual_curation CDS 28065659 28066123 . - 0 Parent=GSCOCT00032550001 | |
| 66477 chr11 manual_curation gene 28086998 28088720 . - . ID=GSCOCG00032548001;Name=Cc11_g10660 | |
| 66478 chr11 manual_curation mRNA 28086998 28088720 . - . ID=GSCOCT00032548001;Parent=GSCOCG00032548001;Name=Cc11_g10660 | |
| 66479 chr11 manual_curation polypeptide 28087290 28088720 . - . ID=GSCOCP00032548001;Dbxref=GENE3D:G3DSA:2.40.70.10,InterPro:IPR001461,InterPro:IPR001969,InterPro:IPR009007,InterPro:IPR021109,PANTHER:PTHR13683,PFAM:PF00026,PRINTS:PR00792,PROSITE:PS00141,SUPERFAMILY:SSF50630,SwissProt:Q766C2,SwissProt:Q766C3,SwissProt:Q9LS40,TAIR:AT3G12700.1,TAIR:AT3G25700.1,TAIR:AT3G59080.1,TrEMBL:B9SEI2,TrEMBL:F6HF17,TrEMBL:Q9LI73;Derives_from=GSCOCT00032548001;Name=Cc11_g10660;Ontology_term=CC_evidence_code:ISS,GO:0004190,GO:0006508,CC_EC_number:missing_EC_number,PRODUCT:Putative Aspartic proteinase nepenthesin-2,CC_functional_completeness:complete,CC_gene:nep2,CC_gene:nep1,CC_gene:ASPG1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032548001~ Putative Aspartic proteinase nepenthesin-2~ nep2~ complete;original_location=3253946..3255376;owner=coffea | |
| 66480 chr11 manual_curation exon 28086998 28088720 . - . Parent=GSCOCT00032548001 | |
| 66481 chr11 manual_curation CDS 28087290 28088720 . - 0 Parent=GSCOCT00032548001 | |
| 66482 chr11 manual_curation gene 28090928 28094829 . - . ID=GSCOCG00032547001;Name=Cc11_g10670 | |
| 66483 chr11 manual_curation mRNA 28090928 28094829 . - . ID=GSCOCT00032547001;Parent=GSCOCG00032547001;Name=Cc11_g10670 | |
| 66484 chr11 manual_curation polypeptide 28091468 28093850 . - . ID=GSCOCP00032547001;Dbxref=InterPro:IPR007590,PANTHER:PTHR12111,PFAM:PF04502,SwissProt:P13994,SwissProt:Q32PZ9,SwissProt:Q5EA37,TAIR:AT1G17130.2,TAIR:AT1G25682.1,TAIR:AT1G25988.1,TrEMBL:B9HIY1,TrEMBL:B9HWM4,TrEMBL:B9SEI0;Derives_from=GSCOCT00032547001;Name=Cc11_g10670;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Coiled-coil domain-containing protein 130,CC_functional_completeness:fragment,CC_gene:CCDC130,CC_gene:Ccdc130;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032547001~ Putative Coiled-coil domain-containing protein 130~ CCDC130~ fragment;original_location=join(3248816..3248854%2C3248935..3248997%2C3249156..3249235%2C3249691..3249799%2C3249896..3250055%2C3250643..3250806%2C3250893..3251198);owner=coffea | |
| 66485 chr11 manual_curation exon 28093812 28094829 . - . Parent=GSCOCT00032547001 | |
| 66486 chr11 manual_curation exon 28093669 28093731 . - . Parent=GSCOCT00032547001 | |
| 66487 chr11 manual_curation exon 28093431 28093510 . - . Parent=GSCOCT00032547001 | |
| 66488 chr11 manual_curation exon 28092867 28092975 . - . Parent=GSCOCT00032547001 | |
| 66489 chr11 manual_curation exon 28092611 28092770 . - . Parent=GSCOCT00032547001 | |
| 66490 chr11 manual_curation exon 28091860 28092023 . - . Parent=GSCOCT00032547001 | |
| 66491 chr11 manual_curation exon 28090928 28091773 . - . Parent=GSCOCT00032547001 | |
| 66492 chr11 manual_curation CDS 28093812 28093850 . - 0 Parent=GSCOCT00032547001 | |
| 66493 chr11 manual_curation CDS 28093669 28093731 . - 0 Parent=GSCOCT00032547001 | |
| 66494 chr11 manual_curation CDS 28093431 28093510 . - 0 Parent=GSCOCT00032547001 | |
| 66495 chr11 manual_curation CDS 28092867 28092975 . - 2 Parent=GSCOCT00032547001 | |
| 66496 chr11 manual_curation CDS 28092611 28092770 . - 0 Parent=GSCOCT00032547001 | |
| 66497 chr11 manual_curation CDS 28091860 28092023 . - 1 Parent=GSCOCT00032547001 | |
| 66498 chr11 manual_curation CDS 28091468 28091773 . - 0 Parent=GSCOCT00032547001 | |
| 66499 chr11 manual_curation gene 28096923 28097252 . + . ID=GSCOCG00032546001;Name=Cc11_g10680 | |
| 66500 chr11 manual_curation mRNA 28096923 28097252 . + . ID=GSCOCT00032546001;Parent=GSCOCG00032546001;Name=Cc11_g10680 | |
| 66501 chr11 manual_curation polypeptide 28096923 28097252 . + . ID=GSCOCP00032546001;Dbxref=SwissProt:Q6NMF0,TAIR:AT1G68795.1,TAIR:AT1G73965.1,TrEMBL:B9HWM5;Derives_from=GSCOCT00032546001;Name=Cc11_g10680;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative CLAVATA3/ESR (CLE)-related protein 13,CC_functional_completeness:complete,CC_gene:CLE13;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032546001~ Putative CLAVATA3/ESR (CLE)-related protein 13~ CLE13~ complete;original_location=complement(3245414..3245743);owner=coffea | |
| 66502 chr11 manual_curation exon 28096923 28097252 . + . Parent=GSCOCT00032546001 | |
| 66503 chr11 manual_curation CDS 28096923 28097252 . + 0 Parent=GSCOCT00032546001 | |
| 66504 chr11 manual_curation gene 28102913 28103377 . + . ID=GSCOCG00032545001;Name=Cc11_g10690 | |
| 66505 chr11 manual_curation mRNA 28102913 28103377 . + . ID=GSCOCT00032545001;Parent=GSCOCG00032545001;Name=Cc11_g10690 | |
| 66506 chr11 manual_curation polypeptide 28102913 28103377 . + . ID=GSCOCP00032545001;Dbxref=TrEMBL:B9HWM6,TrEMBL:B9SEH8,TrEMBL:F6HF21;Derives_from=GSCOCT00032545001;Name=Cc11_g10690;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032545001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=complement(3239289..3239753);owner=coffea | |
| 66507 chr11 manual_curation exon 28102913 28103377 . + . Parent=GSCOCT00032545001 | |
| 66508 chr11 manual_curation CDS 28102913 28103377 . + 0 Parent=GSCOCT00032545001 | |
| 66509 chr11 manual_curation gene 28105036 28108570 . + . ID=GSCOCG00032544001;Name=Cc11_g10700 | |
| 66510 chr11 manual_curation mRNA 28105036 28108570 . + . ID=GSCOCT00032544001;Parent=GSCOCG00032544001;Name=Cc11_g10700 | |
| 66511 chr11 manual_curation polypeptide 28105169 28108256 . + . ID=GSCOCP00032544001;Dbxref=SwissProt:Q46366,SwissProt:Q6DYE4,TAIR:AT1G26090.1,TrEMBL:B9HWM7,TrEMBL:F6HF23,TrEMBL:G7JX27;Derives_from=GSCOCT00032544001;Name=Cc11_g10700;Ontology_term=CC_evidence_code:ISS,CC_EC_number:3.6.3.16,PRODUCT:Uncharacterized protein At1g26090%2C chloroplastic,CC_functional_completeness:complete,CC_gene:At1g26090,CC_gene:CT1945;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032544001~ Uncharacterized protein At1g26090%2C chloroplastic~ At1g26090~ complete;original_location=complement(join(3237249..3237497%2C3236284..3236427%2C3236110..3236184%2C3235808..3236001%2C3235538..3235709%2C3235048..3235455%2C3234410..3234541));owner=coffea | |
| 66512 chr11 manual_curation exon 28108125 28108570 . + . Parent=GSCOCT00032544001 | |
| 66513 chr11 manual_curation exon 28107211 28107618 . + . Parent=GSCOCT00032544001 | |
| 66514 chr11 manual_curation exon 28106957 28107128 . + . Parent=GSCOCT00032544001 | |
| 66515 chr11 manual_curation exon 28106665 28106858 . + . Parent=GSCOCT00032544001 | |
| 66516 chr11 manual_curation exon 28106482 28106556 . + . Parent=GSCOCT00032544001 | |
| 66517 chr11 manual_curation exon 28106239 28106382 . + . Parent=GSCOCT00032544001 | |
| 66518 chr11 manual_curation exon 28105036 28105417 . + . Parent=GSCOCT00032544001 | |
| 66519 chr11 manual_curation CDS 28108125 28108256 . + 0 Parent=GSCOCT00032544001 | |
| 66520 chr11 manual_curation CDS 28107211 28107618 . + 0 Parent=GSCOCT00032544001 | |
| 66521 chr11 manual_curation CDS 28106957 28107128 . + 2 Parent=GSCOCT00032544001 | |
| 66522 chr11 manual_curation CDS 28106665 28106858 . + 0 Parent=GSCOCT00032544001 | |
| 66523 chr11 manual_curation CDS 28106482 28106556 . + 0 Parent=GSCOCT00032544001 | |
| 66524 chr11 manual_curation CDS 28106239 28106382 . + 0 Parent=GSCOCT00032544001 | |
| 66525 chr11 manual_curation CDS 28105169 28105417 . + 0 Parent=GSCOCT00032544001 | |
| 66526 chr11 manual_curation gene 28109170 28114340 . - . ID=GSCOCG00032543001;Name=Cc11_g10710 | |
| 66527 chr11 manual_curation mRNA 28109170 28114340 . - . ID=GSCOCT00032543001;Parent=GSCOCG00032543001;Name=Cc11_g10710 | |
| 66528 chr11 manual_curation polypeptide 28109192 28113750 . - . ID=GSCOCP00032543001;Dbxref=SwissProt:Q9LI74,TAIR:AT1G48280.1,TAIR:AT3G25690.1,TAIR:AT4G18570.1,TrEMBL:B9SEH5,TrEMBL:F6HF24,TrEMBL:I1JDY1;Derives_from=GSCOCT00032543001;Name=Cc11_g10710;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein CHUP1%2C chloroplastic,CC_functional_completeness:complete,CC_gene:CHUP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032543001~ Protein CHUP1%2C chloroplastic~ CHUP1~ complete;original_location=join(3228916..3229024%2C3229309..3229394%2C3229559..3230326%2C3230468..3231802%2C3231888..3232019%2C3232346..3232527%2C3232637..3232748%2C3233029..3233172%2C3233379..3233474);owner=coffea | |
| 66529 chr11 manual_curation exon 28113642 28114340 . - . Parent=GSCOCT00032543001 | |
| 66530 chr11 manual_curation exon 28113272 28113357 . - . Parent=GSCOCT00032543001 | |
| 66531 chr11 manual_curation exon 28112340 28113107 . - . Parent=GSCOCT00032543001 | |
| 66532 chr11 manual_curation exon 28110864 28112198 . - . Parent=GSCOCT00032543001 | |
| 66533 chr11 manual_curation exon 28110647 28110778 . - . Parent=GSCOCT00032543001 | |
| 66534 chr11 manual_curation exon 28110139 28110320 . - . Parent=GSCOCT00032543001 | |
| 66535 chr11 manual_curation exon 28109918 28110029 . - . Parent=GSCOCT00032543001 | |
| 66536 chr11 manual_curation exon 28109494 28109637 . - . Parent=GSCOCT00032543001 | |
| 66537 chr11 manual_curation exon 28109170 28109287 . - . Parent=GSCOCT00032543001 | |
| 66538 chr11 manual_curation CDS 28113642 28113750 . - 0 Parent=GSCOCT00032543001 | |
| 66539 chr11 manual_curation CDS 28113272 28113357 . - 1 Parent=GSCOCT00032543001 | |
| 66540 chr11 manual_curation CDS 28112340 28113107 . - 0 Parent=GSCOCT00032543001 | |
| 66541 chr11 manual_curation CDS 28110864 28112198 . - 0 Parent=GSCOCT00032543001 | |
| 66542 chr11 manual_curation CDS 28110647 28110778 . - 0 Parent=GSCOCT00032543001 | |
| 66543 chr11 manual_curation CDS 28110139 28110320 . - 0 Parent=GSCOCT00032543001 | |
| 66544 chr11 manual_curation CDS 28109918 28110029 . - 2 Parent=GSCOCT00032543001 | |
| 66545 chr11 manual_curation CDS 28109494 28109637 . - 0 Parent=GSCOCT00032543001 | |
| 66546 chr11 manual_curation CDS 28109192 28109287 . - 0 Parent=GSCOCT00032543001 | |
| 66547 chr11 manual_curation gene 28115717 28121405 . - . ID=GSCOCG00032542001;Name=Cc11_g10720 | |
| 66548 chr11 manual_curation mRNA 28115717 28121405 . - . ID=GSCOCT00032542001;Parent=GSCOCG00032542001;Name=Cc11_g10720 | |
| 66549 chr11 manual_curation polypeptide 28117286 28121214 . - . ID=GSCOCP00032542001;Dbxref=TAIR:AT3G25680.1,TAIR:AT5G23890.1,TAIR:AT5G52410.2,TrEMBL:B9HWM9,TrEMBL:B9SEH4,TrEMBL:D7T9A7;Derives_from=GSCOCT00032542001;Name=Cc11_g10720;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032542001~ Putative FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: S-layer homology domain (InterPro:IPR001119)%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23890.1)%3B Has 2454 Blast hits to 2065 proteins in 355 species: Archae - 39%3B Bacteria - 284%3B Metazoa - 1081%3B Fungi - 166%3B Plants - 264%3B Viruses - 45%3B Other Eukaryotes - 575 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(3221452..3221713%2C3221912..3221995%2C3222098..3222280%2C3222863..3222963%2C3223284..3223372%2C3223520..3223623%2C3223712..3223817%2C3223900..3223975%2C3224105..3224219%2C3224541..3225072%2C3225275..3225380);owner=coffea | |
| 66550 chr11 manual_curation exon 28120953 28121405 . - . Parent=GSCOCT00032542001 | |
| 66551 chr11 manual_curation exon 28120671 28120754 . - . Parent=GSCOCT00032542001 | |
| 66552 chr11 manual_curation exon 28120386 28120568 . - . Parent=GSCOCT00032542001 | |
| 66553 chr11 manual_curation exon 28119703 28119803 . - . Parent=GSCOCT00032542001 | |
| 66554 chr11 manual_curation exon 28119294 28119382 . - . Parent=GSCOCT00032542001 | |
| 66555 chr11 manual_curation exon 28119043 28119146 . - . Parent=GSCOCT00032542001 | |
| 66556 chr11 manual_curation exon 28118849 28118954 . - . Parent=GSCOCT00032542001 | |
| 66557 chr11 manual_curation exon 28118691 28118766 . - . Parent=GSCOCT00032542001 | |
| 66558 chr11 manual_curation exon 28118447 28118561 . - . Parent=GSCOCT00032542001 | |
| 66559 chr11 manual_curation exon 28117594 28118125 . - . Parent=GSCOCT00032542001 | |
| 66560 chr11 manual_curation exon 28115717 28117391 . - . Parent=GSCOCT00032542001 | |
| 66561 chr11 manual_curation CDS 28120953 28121214 . - 0 Parent=GSCOCT00032542001 | |
| 66562 chr11 manual_curation CDS 28120671 28120754 . - 1 Parent=GSCOCT00032542001 | |
| 66563 chr11 manual_curation CDS 28120386 28120568 . - 1 Parent=GSCOCT00032542001 | |
| 66564 chr11 manual_curation CDS 28119703 28119803 . - 1 Parent=GSCOCT00032542001 | |
| 66565 chr11 manual_curation CDS 28119294 28119382 . - 0 Parent=GSCOCT00032542001 | |
| 66566 chr11 manual_curation CDS 28119043 28119146 . - 2 Parent=GSCOCT00032542001 | |
| 66567 chr11 manual_curation CDS 28118849 28118954 . - 1 Parent=GSCOCT00032542001 | |
| 66568 chr11 manual_curation CDS 28118691 28118766 . - 2 Parent=GSCOCT00032542001 | |
| 66569 chr11 manual_curation CDS 28118447 28118561 . - 0 Parent=GSCOCT00032542001 | |
| 66570 chr11 manual_curation CDS 28117594 28118125 . - 1 Parent=GSCOCT00032542001 | |
| 66571 chr11 manual_curation CDS 28117286 28117391 . - 2 Parent=GSCOCT00032542001 | |
| 66572 chr11 manual_curation gene 28124043 28126735 . - . ID=GSCOCG00032540001;Name=Cc11_g10730 | |
| 66573 chr11 manual_curation mRNA 28124043 28126735 . - . ID=GSCOCT00032540001;Parent=GSCOCG00032540001;Name=Cc11_g10730 | |
| 66574 chr11 manual_curation polypeptide 28124396 28126441 . - . ID=GSCOCP00032540001;Dbxref=InterPro:IPR004877,InterPro:IPR006593,PFAM:PF03188,PROFILE:PS50939,SMART:SM00665,SwissProt:Q6I681,SwissProt:Q9C540,SwissProt:Q9SWS1,TAIR:AT1G26100.1,TAIR:AT4G25570.1,TAIR:AT5G38630.1,TrEMBL:A5B730,TrEMBL:B9HWN0,TrEMBL:D7T9A8;Derives_from=GSCOCT00032540001;Name=Cc11_g10730;Ontology_term=CC_evidence_code:ISS,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Probable transmembrane ascorbate ferrireductase 4,CC_functional_completeness:complete,CC_gene:CYB561D,CC_gene:CYB561B,CC_gene:ZCYB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032540001~ Probable transmembrane ascorbate ferrireductase 4~ CYB561D~ complete;original_location=join(3216225..3216374%2C3216470..3216521%2C3216612..3216808%2C3217944..3218270);owner=coffea | |
| 66575 chr11 manual_curation exon 28126292 28126735 . - . Parent=GSCOCT00032540001 | |
| 66576 chr11 manual_curation exon 28126145 28126196 . - . Parent=GSCOCT00032540001 | |
| 66577 chr11 manual_curation exon 28125858 28126054 . - . Parent=GSCOCT00032540001 | |
| 66578 chr11 manual_curation exon 28124043 28124722 . - . Parent=GSCOCT00032540001 | |
| 66579 chr11 manual_curation CDS 28126292 28126441 . - 0 Parent=GSCOCT00032540001 | |
| 66580 chr11 manual_curation CDS 28126145 28126196 . - 0 Parent=GSCOCT00032540001 | |
| 66581 chr11 manual_curation CDS 28125858 28126054 . - 1 Parent=GSCOCT00032540001 | |
| 66582 chr11 manual_curation CDS 28124396 28124722 . - 0 Parent=GSCOCT00032540001 | |
| 66583 chr11 manual_curation gene 28131238 28133830 . + . ID=GSCOCG00032539001;Name=Cc11_g10740 | |
| 66584 chr11 manual_curation mRNA 28131238 28133830 . + . ID=GSCOCT00032539001;Parent=GSCOCG00032539001;Name=Cc11_g10740 | |
| 66585 chr11 manual_curation polypeptide 28131238 28133675 . + . ID=GSCOCP00032539001;Dbxref=InterPro:IPR003819,PFAM:PF02668,SwissProt:Q9LIG0,TAIR:AT3G21360.1,TrEMBL:B9HWN2,TrEMBL:B9P4Z7,TrEMBL:B9SEH2;Derives_from=GSCOCT00032539001;Name=Cc11_g10740;Ontology_term=CC_evidence_code:ISS,GO:0016491,GO:0055114,CC_EC_number:missing_EC_number,PRODUCT:Putative Clavaminate synthase-like protein At3g21360,CC_functional_completeness:complete,CC_gene:At3g21360;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032539001~ Putative Clavaminate synthase-like protein At3g21360~ At3g21360~ complete;original_location=complement(join(3211063..3211428%2C3209749..3210002%2C3208991..3209336));owner=coffea | |
| 66586 chr11 manual_curation exon 28133330 28133830 . + . Parent=GSCOCT00032539001 | |
| 66587 chr11 manual_curation exon 28132664 28132917 . + . Parent=GSCOCT00032539001 | |
| 66588 chr11 manual_curation exon 28131238 28131603 . + . Parent=GSCOCT00032539001 | |
| 66589 chr11 manual_curation CDS 28133330 28133675 . + 2 Parent=GSCOCT00032539001 | |
| 66590 chr11 manual_curation CDS 28132664 28132917 . + 0 Parent=GSCOCT00032539001 | |
| 66591 chr11 manual_curation CDS 28131238 28131603 . + 0 Parent=GSCOCT00032539001 | |
| 66592 chr11 manual_curation gene 28133982 28139838 . - . ID=GSCOCG00032538001;Name=Cc11_g10750 | |
| 66593 chr11 manual_curation mRNA 28133982 28139838 . - . ID=GSCOCT00032538001;Parent=GSCOCG00032538001;Name=Cc11_g10750 | |
| 66594 chr11 manual_curation polypeptide 28134470 28139535 . - . ID=GSCOCP00032538001;Dbxref=InterPro:IPR019050,InterPro:IPR019053,PFAM:PF09532,PFAM:PF09542,SwissProt:Q8CGC4,SwissProt:Q8ND56,SwissProt:Q9BX40,TAIR:AT1G26110.1,TAIR:AT4G19360.1,TAIR:AT5G45330.1,TrEMBL:B9HIX6,TrEMBL:F6HF25,TrEMBL:I1J6S2;Derives_from=GSCOCT00032538001;Name=Cc11_g10750;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:decapping 5,CC_functional_completeness:complete,CC_gene:Lsm14b,CC_gene:LSM14B,CC_gene:LSM14A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032538001~ decapping 5~ Lsm14b~ complete;original_location=join(3203131..3203302%2C3204487..3204587%2C3205432..3205522%2C3205605..3206521%2C3207174..3207236%2C3207552..3207752%2C3207857..3207967%2C3208044..3208196);owner=coffea | |
| 66595 chr11 manual_curation exon 28139364 28139838 . - . Parent=GSCOCT00032538001 | |
| 66596 chr11 manual_curation exon 28138079 28138179 . - . Parent=GSCOCT00032538001 | |
| 66597 chr11 manual_curation exon 28137144 28137234 . - . Parent=GSCOCT00032538001 | |
| 66598 chr11 manual_curation exon 28136145 28137061 . - . Parent=GSCOCT00032538001 | |
| 66599 chr11 manual_curation exon 28135430 28135492 . - . Parent=GSCOCT00032538001 | |
| 66600 chr11 manual_curation exon 28134914 28135114 . - . Parent=GSCOCT00032538001 | |
| 66601 chr11 manual_curation exon 28134699 28134809 . - . Parent=GSCOCT00032538001 | |
| 66602 chr11 manual_curation exon 28133982 28134622 . - . Parent=GSCOCT00032538001 | |
| 66603 chr11 manual_curation CDS 28139364 28139535 . - 0 Parent=GSCOCT00032538001 | |
| 66604 chr11 manual_curation CDS 28138079 28138179 . - 1 Parent=GSCOCT00032538001 | |
| 66605 chr11 manual_curation CDS 28137144 28137234 . - 0 Parent=GSCOCT00032538001 | |
| 66606 chr11 manual_curation CDS 28136145 28137061 . - 1 Parent=GSCOCT00032538001 | |
| 66607 chr11 manual_curation CDS 28135430 28135492 . - 0 Parent=GSCOCT00032538001 | |
| 66608 chr11 manual_curation CDS 28134914 28135114 . - 0 Parent=GSCOCT00032538001 | |
| 66609 chr11 manual_curation CDS 28134699 28134809 . - 0 Parent=GSCOCT00032538001 | |
| 66610 chr11 manual_curation CDS 28134470 28134622 . - 0 Parent=GSCOCT00032538001 | |
| 66611 chr11 manual_curation gene 28141566 28149089 . + . ID=GSCOCG00032537001;Name=Cc11_g10760 | |
| 66612 chr11 manual_curation mRNA 28141566 28149089 . + . ID=GSCOCT00032537001;Parent=GSCOCG00032537001;Name=Cc11_g10760 | |
| 66613 chr11 manual_curation polypeptide 28141874 28149089 . + . ID=GSCOCP00032537001;Dbxref=SwissProt:Q9FLH0,TAIR:AT1G13220.2,TAIR:AT1G67230.1,TAIR:AT1G68790.1,TrEMBL:A5BQE9,TrEMBL:B9SEG9,TrEMBL:F6HF26;Derives_from=GSCOCT00032537001;Name=Cc11_g10760;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative nuclear matrix constituent protein-related,CC_functional_completeness:complete,CC_gene:At5g65770;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032537001~ Putative nuclear matrix constituent protein-related~ At5g65770~ complete;original_location=complement(join(3200761..3200792%2C3200454..3200679%2C3199510..3199719%2C3198868..3199121%2C3198496..3198766%2C3198256..3198339%2C3196626..3197402%2C3195899..3196571%2C3195681..3195820%2C3195385..3195593%2C3193879..3194098%2C3193577..3193795));owner=coffea | |
| 66614 chr11 manual_curation exon 28148871 28149089 . + . Parent=GSCOCT00032537001 | |
| 66615 chr11 manual_curation exon 28148568 28148787 . + . Parent=GSCOCT00032537001 | |
| 66616 chr11 manual_curation exon 28147073 28147281 . + . Parent=GSCOCT00032537001 | |
| 66617 chr11 manual_curation exon 28146846 28146985 . + . Parent=GSCOCT00032537001 | |
| 66618 chr11 manual_curation exon 28146095 28146767 . + . Parent=GSCOCT00032537001 | |
| 66619 chr11 manual_curation exon 28145264 28146040 . + . Parent=GSCOCT00032537001 | |
| 66620 chr11 manual_curation exon 28144327 28144410 . + . Parent=GSCOCT00032537001 | |
| 66621 chr11 manual_curation exon 28143900 28144170 . + . Parent=GSCOCT00032537001 | |
| 66622 chr11 manual_curation exon 28143545 28143798 . + . Parent=GSCOCT00032537001 | |
| 66623 chr11 manual_curation exon 28142947 28143156 . + . Parent=GSCOCT00032537001 | |
| 66624 chr11 manual_curation exon 28141987 28142212 . + . Parent=GSCOCT00032537001 | |
| 66625 chr11 manual_curation exon 28141566 28141905 . + . Parent=GSCOCT00032537001 | |
| 66626 chr11 manual_curation CDS 28148871 28149089 . + 0 Parent=GSCOCT00032537001 | |
| 66627 chr11 manual_curation CDS 28148568 28148787 . + 2 Parent=GSCOCT00032537001 | |
| 66628 chr11 manual_curation CDS 28147073 28147281 . + 0 Parent=GSCOCT00032537001 | |
| 66629 chr11 manual_curation CDS 28146846 28146985 . + 1 Parent=GSCOCT00032537001 | |
| 66630 chr11 manual_curation CDS 28146095 28146767 . + 0 Parent=GSCOCT00032537001 | |
| 66631 chr11 manual_curation CDS 28145264 28146040 . + 0 Parent=GSCOCT00032537001 | |
| 66632 chr11 manual_curation CDS 28144327 28144410 . + 0 Parent=GSCOCT00032537001 | |
| 66633 chr11 manual_curation CDS 28143900 28144170 . + 2 Parent=GSCOCT00032537001 | |
| 66634 chr11 manual_curation CDS 28143545 28143798 . + 0 Parent=GSCOCT00032537001 | |
| 66635 chr11 manual_curation CDS 28142947 28143156 . + 0 Parent=GSCOCT00032537001 | |
| 66636 chr11 manual_curation CDS 28141987 28142212 . + 2 Parent=GSCOCT00032537001 | |
| 66637 chr11 manual_curation CDS 28141874 28141905 . + 0 Parent=GSCOCT00032537001 | |
| 66638 chr11 manual_curation gene 28152381 28154819 . + . ID=GSCOCG00032534001;Name=Cc11_g10770 | |
| 66639 chr11 manual_curation mRNA 28152381 28154819 . + . ID=GSCOCT00032534001;Parent=GSCOCG00032534001;Name=Cc11_g10770 | |
| 66640 chr11 manual_curation polypeptide 28152381 28154538 . + . ID=GSCOCP00032534001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,PFAM:PF00560,SMART:SM00369,SwissProt:Q5PP26,SwissProt:Q9LP24,SwissProt:Q9SSD1,TAIR:AT1G13230.1,TAIR:AT1G68780.1,TAIR:AT3G25670.1,TrEMBL:A5BQF0,TrEMBL:B9SEG8,TrEMBL:F6HF27;Derives_from=GSCOCT00032534001;Name=Cc11_g10770;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Piriformospora indica-insensitive protein 2,CC_functional_completeness:complete,CC_gene:PII-2,CC_gene:TMM,CC_gene:At1g35710;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032534001~ Piriformospora indica-insensitive protein 2~ PII-2~ complete;original_location=complement(join(3190175..3190285%2C3188128..3189378));owner=coffea | |
| 66641 chr11 manual_curation exon 28153288 28154819 . + . Parent=GSCOCT00032534001 | |
| 66642 chr11 manual_curation exon 28152381 28152491 . + . Parent=GSCOCT00032534001 | |
| 66643 chr11 manual_curation CDS 28153288 28154538 . + 0 Parent=GSCOCT00032534001 | |
| 66644 chr11 manual_curation CDS 28152381 28152491 . + 0 Parent=GSCOCT00032534001 | |
| 66645 chr11 manual_curation gene 28173306 28174325 . - . ID=GSCOCG00032530001;Name=Cc11_g10780 | |
| 66646 chr11 manual_curation mRNA 28173306 28174325 . - . ID=GSCOCT00032530001;Parent=GSCOCG00032530001;Name=Cc11_g10780 | |
| 66647 chr11 manual_curation polypeptide 28173436 28174224 . - . ID=GSCOCP00032530001;Dbxref=InterPro:IPR006460,PFAM:PF04759,TAIR:AT2G41660.1,TAIR:AT3G25640.1,TAIR:AT5G23100.1,TIGRFAMs:TIGR01570,TrEMBL:B9HWN5,TrEMBL:B9SEG5,TrEMBL:D7T9B3;Derives_from=GSCOCT00032530001;Name=Cc11_g10780;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function%2C DUF617,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032530001~ Protein of unknown function%2C DUF617~ unknown_gene~ complete;original_location=3168442..3169230;owner=coffea | |
| 66648 chr11 manual_curation exon 28173306 28174325 . - . Parent=GSCOCT00032530001 | |
| 66649 chr11 manual_curation CDS 28173436 28174224 . - 0 Parent=GSCOCT00032530001 | |
| 66650 chr11 manual_curation gene 28176545 28178398 . - . ID=GSCOCG00032529001;Name=Cc11_g10790 | |
| 66651 chr11 manual_curation mRNA 28176545 28178398 . - . ID=GSCOCT00032529001;Parent=GSCOCG00032529001;Name=Cc11_g10790 | |
| 66652 chr11 manual_curation polypeptide 28177003 28178398 . - . ID=GSCOCP00032529001;Dbxref=GENE3D:G3DSA:3.90.79.10,InterPro:IPR000086,InterPro:IPR015797,InterPro:IPR020084,InterPro:IPR020476,PFAM:PF00293,PRINTS:PR00502,PROSITE:PS00893,SUPERFAMILY:SSF55811,SwissProt:Q8BG93,SwissProt:Q9CA40,SwissProt:Q9NV35,TAIR:AT1G68760.1,TrEMBL:B9HIX0,TrEMBL:D7KWF9,TrEMBL:I1J6S8;Derives_from=GSCOCT00032529001;Name=Cc11_g10790;Ontology_term=CC_evidence_code:ISS,GO:0016787,CC_EC_number:3.6.1.22,PRODUCT:Nudix hydrolase 1,CC_functional_completeness:complete,CC_gene:NUDT1,CC_gene:NUDT15,CC_gene:Nudt15;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032529001~ Nudix hydrolase 1~ NUDT1~ complete;original_location=join(3164268..3164433%2C3165365..3165663);owner=coffea | |
| 66653 chr11 manual_curation exon 28178233 28178398 . - . Parent=GSCOCT00032529001 | |
| 66654 chr11 manual_curation exon 28176545 28177301 . - . Parent=GSCOCT00032529001 | |
| 66655 chr11 manual_curation CDS 28178233 28178398 . - 0 Parent=GSCOCT00032529001 | |
| 66656 chr11 manual_curation CDS 28177003 28177301 . - 1 Parent=GSCOCT00032529001 | |
| 66657 chr11 manual_curation gene 28180827 28181814 . - . ID=GSCOCG00032528001;Name=Cc11_g10800 | |
| 66658 chr11 manual_curation mRNA 28180827 28181814 . - . ID=GSCOCT00032528001;Parent=GSCOCG00032528001;Name=Cc11_g10800 | |
| 66659 chr11 manual_curation polypeptide 28180988 28181814 . - . ID=GSCOCP00032528001;Dbxref=GENE3D:G3DSA:3.90.79.10,InterPro:IPR000086,InterPro:IPR015797,InterPro:IPR020084,InterPro:IPR020476,PFAM:PF00293,PRINTS:PR00502,PROSITE:PS00893,SUPERFAMILY:SSF55811,SwissProt:Q8BG93,SwissProt:Q9CA40,SwissProt:Q9NV35,TAIR:AT1G68760.1,TrEMBL:B9HIX0,TrEMBL:B9SEG4,TrEMBL:D7T9B5;Derives_from=GSCOCT00032528001;Name=Cc11_g10800;Ontology_term=CC_evidence_code:ISS,GO:0016787,CC_EC_number:3.6.1.22,PRODUCT:Nudix hydrolase 1,CC_functional_completeness:complete,CC_gene:NUDT1,CC_gene:NUDT15,CC_gene:Nudt15;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032528001~ Nudix hydrolase 1~ NUDT1~ complete;original_location=join(3160852..3161020%2C3161380..3161678);owner=coffea | |
| 66660 chr11 manual_curation exon 28181646 28181814 . - . Parent=GSCOCT00032528001 | |
| 66661 chr11 manual_curation exon 28180827 28181286 . - . Parent=GSCOCT00032528001 | |
| 66662 chr11 manual_curation CDS 28181646 28181814 . - 0 Parent=GSCOCT00032528001 | |
| 66663 chr11 manual_curation CDS 28180988 28181286 . - 1 Parent=GSCOCT00032528001 | |
| 66664 chr11 manual_curation gene 28183481 28195476 . + . ID=GSCOCG00032527001;Name=Cc11_g10810 | |
| 66665 chr11 manual_curation mRNA 28183481 28195476 . + . ID=GSCOCT00032527001;Parent=GSCOCG00032527001;Name=Cc11_g10810 | |
| 66666 chr11 manual_curation polypeptide 28183672 28195476 . + . ID=GSCOCP00032527001;Dbxref=GENE3D:G3DSA:3.20.20.60,HAMAP:MF_00595,InterPro:IPR015813,InterPro:IPR018129,InterPro:IPR021135,InterPro:IPR022805,PFAM:PF00311,PRINTS:PR00150,PROSITE:PS00393,PROSITE:PS00781,SUPERFAMILY:SSF51621,SwissProt:Q5GM68,SwissProt:Q6R2V6,SwissProt:Q8GVE8,TAIR:AT1G53310.1,TAIR:AT1G68750.1,TAIR:AT2G42600.2,TrEMBL:A5AEV0,TrEMBL:A6YM33,TrEMBL:F6HFQ3;Derives_from=GSCOCT00032527001;Name=Cc11_g10810;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0006099,GO:0008964,GO:0015977,CC_EC_number:4.1.1.31,PRODUCT:Phosphoenolpyruvate carboxylase 4,CC_functional_completeness:complete,CC_gene:PPC4,CC_gene:Ppc2,CC_gene:PPC2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032527001~ Phosphoenolpyruvate carboxylase 4~ PPC4~ complete;original_location=complement(join(3158839..3158994%2C3157952..3158115%2C3157410..3157524%2C3157231..3157308%2C3157073..3157144%2C3156922..3157000%2C3156772..3156848%2C3156589..3156684%2C3155558..3155699%2C3154816..3154947%2C3153906..3153979%2C3153487..3153765%2C3151785..3151910%2C3151535..3151636%2C3151282..3151428%2C3150250..3150348%2C3149975..3150063%2C3149221..3149347%2C3148938..3149144%2C3147190..3148014));owner=coffea | |
| 66667 chr11 manual_curation exon 28194652 28195476 . + . Parent=GSCOCT00032527001 | |
| 66668 chr11 manual_curation exon 28193522 28193728 . + . Parent=GSCOCT00032527001 | |
| 66669 chr11 manual_curation exon 28193319 28193445 . + . Parent=GSCOCT00032527001 | |
| 66670 chr11 manual_curation exon 28192603 28192691 . + . Parent=GSCOCT00032527001 | |
| 66671 chr11 manual_curation exon 28192318 28192416 . + . Parent=GSCOCT00032527001 | |
| 66672 chr11 manual_curation exon 28191238 28191384 . + . Parent=GSCOCT00032527001 | |
| 66673 chr11 manual_curation exon 28191030 28191131 . + . Parent=GSCOCT00032527001 | |
| 66674 chr11 manual_curation exon 28190756 28190881 . + . Parent=GSCOCT00032527001 | |
| 66675 chr11 manual_curation exon 28188901 28189179 . + . Parent=GSCOCT00032527001 | |
| 66676 chr11 manual_curation exon 28188687 28188760 . + . Parent=GSCOCT00032527001 | |
| 66677 chr11 manual_curation exon 28187719 28187850 . + . Parent=GSCOCT00032527001 | |
| 66678 chr11 manual_curation exon 28186967 28187108 . + . Parent=GSCOCT00032527001 | |
| 66679 chr11 manual_curation exon 28185982 28186077 . + . Parent=GSCOCT00032527001 | |
| 66680 chr11 manual_curation exon 28185818 28185894 . + . Parent=GSCOCT00032527001 | |
| 66681 chr11 manual_curation exon 28185666 28185744 . + . Parent=GSCOCT00032527001 | |
| 66682 chr11 manual_curation exon 28185522 28185593 . + . Parent=GSCOCT00032527001 | |
| 66683 chr11 manual_curation exon 28185358 28185435 . + . Parent=GSCOCT00032527001 | |
| 66684 chr11 manual_curation exon 28185142 28185256 . + . Parent=GSCOCT00032527001 | |
| 66685 chr11 manual_curation exon 28184551 28184714 . + . Parent=GSCOCT00032527001 | |
| 66686 chr11 manual_curation exon 28183481 28183827 . + . Parent=GSCOCT00032527001 | |
| 66687 chr11 manual_curation CDS 28194652 28195476 . + 0 Parent=GSCOCT00032527001 | |
| 66688 chr11 manual_curation CDS 28193522 28193728 . + 0 Parent=GSCOCT00032527001 | |
| 66689 chr11 manual_curation CDS 28193319 28193445 . + 2 Parent=GSCOCT00032527001 | |
| 66690 chr11 manual_curation CDS 28192603 28192691 . + 0 Parent=GSCOCT00032527001 | |
| 66691 chr11 manual_curation CDS 28192318 28192416 . + 0 Parent=GSCOCT00032527001 | |
| 66692 chr11 manual_curation CDS 28191238 28191384 . + 0 Parent=GSCOCT00032527001 | |
| 66693 chr11 manual_curation CDS 28191030 28191131 . + 0 Parent=GSCOCT00032527001 | |
| 66694 chr11 manual_curation CDS 28190756 28190881 . + 0 Parent=GSCOCT00032527001 | |
| 66695 chr11 manual_curation CDS 28188901 28189179 . + 0 Parent=GSCOCT00032527001 | |
| 66696 chr11 manual_curation CDS 28188687 28188760 . + 1 Parent=GSCOCT00032527001 | |
| 66697 chr11 manual_curation CDS 28187719 28187850 . + 1 Parent=GSCOCT00032527001 | |
| 66698 chr11 manual_curation CDS 28186967 28187108 . + 0 Parent=GSCOCT00032527001 | |
| 66699 chr11 manual_curation CDS 28185982 28186077 . + 0 Parent=GSCOCT00032527001 | |
| 66700 chr11 manual_curation CDS 28185818 28185894 . + 1 Parent=GSCOCT00032527001 | |
| 66701 chr11 manual_curation CDS 28185666 28185744 . + 0 Parent=GSCOCT00032527001 | |
| 66702 chr11 manual_curation CDS 28185522 28185593 . + 0 Parent=GSCOCT00032527001 | |
| 66703 chr11 manual_curation CDS 28185358 28185435 . + 0 Parent=GSCOCT00032527001 | |
| 66704 chr11 manual_curation CDS 28185142 28185256 . + 2 Parent=GSCOCT00032527001 | |
| 66705 chr11 manual_curation CDS 28184551 28184714 . + 0 Parent=GSCOCT00032527001 | |
| 66706 chr11 manual_curation CDS 28183672 28183827 . + 0 Parent=GSCOCT00032527001 | |
| 66707 chr11 manual_curation gene 28195624 28196041 . - . ID=GSCOCG00032526001;Name=Cc11_g10820 | |
| 66708 chr11 manual_curation mRNA 28195624 28196041 . - . ID=GSCOCT00032526001;Parent=GSCOCG00032526001;Name=Cc11_g10820 | |
| 66709 chr11 manual_curation polypeptide 28195702 28195947 . - . ID=GSCOCP00032526001;Derives_from=GSCOCT00032526001;Name=Cc11_g10820;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032526001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=3146719..3146964;owner=coffea | |
| 66710 chr11 manual_curation exon 28195624 28196041 . - . Parent=GSCOCT00032526001 | |
| 66711 chr11 manual_curation CDS 28195702 28195947 . - 0 Parent=GSCOCT00032526001 | |
| 66712 chr11 manual_curation gene 28208458 28212733 . + . ID=GSCOCG00032525001;Name=Cc11_g10830 | |
| 66713 chr11 manual_curation mRNA 28208458 28212733 . + . ID=GSCOCT00032525001;Parent=GSCOCG00032525001;Name=Cc11_g10830 | |
| 66714 chr11 manual_curation polypeptide 28208766 28212733 . + . ID=GSCOCP00032525001;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR013525,InterPro:IPR017871,PFAM:PF00005,PFAM:PF01061,PROFILE:PS50893,PROSITE:PS00211,SMART:SM00382,SwissProt:Q7XA72,SwissProt:Q9C6W5,SwissProt:Q9SZR9,TAIR:AT1G31770.1,TAIR:AT3G25620.2,TAIR:AT4G27420.1,TrEMBL:B9HWN9,TrEMBL:B9SEG2,TrEMBL:D7T9B7;Derives_from=GSCOCT00032525001;Name=Cc11_g10830;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0016020,GO:0016887,GO:0017111,CC_EC_number:3.6.3.28,CC_EC_number:3.6.3.28,PRODUCT:ABC transporter G family member 21,CC_functional_completeness:complete,CC_gene:ABCG21,CC_gene:ABCG14,CC_gene:ABCG9;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032525001~ ABC transporter G family member 21~ ABCG21~ complete;original_location=complement(join(3133685..3133900%2C3132701..3133499%2C3131034..3131225%2C3130777..3130955%2C3129933..3130583));owner=coffea | |
| 66715 chr11 manual_curation exon 28212083 28212733 . + . Parent=GSCOCT00032525001 | |
| 66716 chr11 manual_curation exon 28211711 28211889 . + . Parent=GSCOCT00032525001 | |
| 66717 chr11 manual_curation exon 28211441 28211632 . + . Parent=GSCOCT00032525001 | |
| 66718 chr11 manual_curation exon 28209167 28209965 . + . Parent=GSCOCT00032525001 | |
| 66719 chr11 manual_curation exon 28208458 28208981 . + . Parent=GSCOCT00032525001 | |
| 66720 chr11 manual_curation CDS 28212083 28212733 . + 0 Parent=GSCOCT00032525001 | |
| 66721 chr11 manual_curation CDS 28211711 28211889 . + 1 Parent=GSCOCT00032525001 | |
| 66722 chr11 manual_curation CDS 28211441 28211632 . + 1 Parent=GSCOCT00032525001 | |
| 66723 chr11 manual_curation CDS 28209167 28209965 . + 0 Parent=GSCOCT00032525001 | |
| 66724 chr11 manual_curation CDS 28208766 28208981 . + 0 Parent=GSCOCT00032525001 | |
| 66725 chr11 manual_curation gene 28217300 28218493 . + . ID=GSCOCG00032523001;Name=Cc11_g10840 | |
| 66726 chr11 manual_curation mRNA 28217300 28218493 . + . ID=GSCOCT00032523001;Parent=GSCOCG00032523001;Name=Cc11_g10840 | |
| 66727 chr11 manual_curation polypeptide 28217735 28218274 . + . ID=GSCOCP00032523001;Derives_from=GSCOCT00032523001;Name=Cc11_g10840;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032523001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(3124773..3124931%2C3124392..3124424));owner=coffea | |
| 66728 chr11 manual_curation exon 28218242 28218493 . + . Parent=GSCOCT00032523001 | |
| 66729 chr11 manual_curation exon 28217300 28217893 . + . Parent=GSCOCT00032523001 | |
| 66730 chr11 manual_curation CDS 28218242 28218274 . + 0 Parent=GSCOCT00032523001 | |
| 66731 chr11 manual_curation CDS 28217735 28217893 . + 0 Parent=GSCOCT00032523001 | |
| 66732 chr11 manual_curation gene 28221585 28222711 . + . ID=GSCOCG00032522001;Name=Cc11_g10850 | |
| 66733 chr11 manual_curation mRNA 28221585 28222711 . + . ID=GSCOCT00032522001;Parent=GSCOCG00032522001;Name=Cc11_g10850 | |
| 66734 chr11 manual_curation polypeptide 28221585 28222515 . + . ID=GSCOCP00032522001;Derives_from=GSCOCT00032522001;Name=Cc11_g10850;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032522001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(3120963..3121081%2C3120151..3120193));owner=coffea | |
| 66735 chr11 manual_curation exon 28222473 28222711 . + . Parent=GSCOCT00032522001 | |
| 66736 chr11 manual_curation exon 28221585 28221703 . + . Parent=GSCOCT00032522001 | |
| 66737 chr11 manual_curation CDS 28222473 28222515 . + 2 Parent=GSCOCT00032522001 | |
| 66738 chr11 manual_curation CDS 28221585 28221703 . + 0 Parent=GSCOCT00032522001 | |
| 66739 chr11 manual_curation gene 28259608 28260515 . + . ID=GSCOCG00032520001;Name=Cc11_g10860 | |
| 66740 chr11 manual_curation mRNA 28259608 28260515 . + . ID=GSCOCT00032520001;Parent=GSCOCG00032520001;Name=Cc11_g10860 | |
| 66741 chr11 manual_curation polypeptide 28259666 28260265 . + . ID=GSCOCP00032520001;Derives_from=GSCOCT00032520001;Name=Cc11_g10860;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032520001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(3082876..3083000%2C3082401..3082452));owner=coffea | |
| 66742 chr11 manual_curation exon 28260214 28260515 . + . Parent=GSCOCT00032520001 | |
| 66743 chr11 manual_curation exon 28259608 28259790 . + . Parent=GSCOCT00032520001 | |
| 66744 chr11 manual_curation CDS 28260214 28260265 . + 2 Parent=GSCOCT00032520001 | |
| 66745 chr11 manual_curation CDS 28259666 28259790 . + 0 Parent=GSCOCT00032520001 | |
| 66746 chr11 manual_curation gene 28270456 28271260 . - . ID=GSCOCG00032519001;Name=Cc11_g10870 | |
| 66747 chr11 manual_curation mRNA 28270456 28271260 . - . ID=GSCOCT00032519001;Parent=GSCOCG00032519001;Name=Cc11_g10870 | |
| 66748 chr11 manual_curation polypeptide 28270740 28271260 . - . ID=GSCOCP00032519001;Derives_from=GSCOCT00032519001;Name=Cc11_g10870;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032519001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(3071406..3071517%2C3071712..3071926);owner=coffea | |
| 66749 chr11 manual_curation exon 28271149 28271260 . - . Parent=GSCOCT00032519001 | |
| 66750 chr11 manual_curation exon 28270456 28270954 . - . Parent=GSCOCT00032519001 | |
| 66751 chr11 manual_curation CDS 28271149 28271260 . - 0 Parent=GSCOCT00032519001 | |
| 66752 chr11 manual_curation CDS 28270740 28270954 . - 1 Parent=GSCOCT00032519001 | |
| 66753 chr11 manual_curation gene 28275458 28276379 . + . ID=GSCOCG00032517001;Name=Cc11_g10880 | |
| 66754 chr11 manual_curation mRNA 28275458 28276379 . + . ID=GSCOCT00032517001;Parent=GSCOCG00032517001;Name=Cc11_g10880 | |
| 66755 chr11 manual_curation polypeptide 28275601 28276219 . + . ID=GSCOCP00032517001;Derives_from=GSCOCT00032517001;Name=Cc11_g10880;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032517001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(3066935..3067065%2C3066447..3066489));owner=coffea | |
| 66756 chr11 manual_curation exon 28276177 28276379 . + . Parent=GSCOCT00032517001 | |
| 66757 chr11 manual_curation exon 28275458 28275731 . + . Parent=GSCOCT00032517001 | |
| 66758 chr11 manual_curation CDS 28276177 28276219 . + 2 Parent=GSCOCT00032517001 | |
| 66759 chr11 manual_curation CDS 28275601 28275731 . + 0 Parent=GSCOCT00032517001 | |
| 66760 chr11 manual_curation gene 28277912 28285445 . - . ID=GSCOCG00032515001;Name=Cc11_g10890 | |
| 66761 chr11 manual_curation mRNA 28277912 28285445 . - . ID=GSCOCT00032515001;Parent=GSCOCG00032515001;Name=Cc11_g10890 | |
| 66762 chr11 manual_curation polypeptide 28278656 28285098 . - . ID=GSCOCP00032515001;Dbxref=InterPro:IPR002018,InterPro:IPR013094,PANTHER:PTHR11559,PFAM:PF07859,SwissProt:Q1PET6,SwissProt:Q8VYP9,SwissProt:Q94AS5,TAIR:AT1G26120.1,TAIR:AT3G02410.1,TAIR:AT5G15860.1,TrEMBL:B9HWP2,TrEMBL:D7T9D3,TrEMBL:I1MMN5;Derives_from=GSCOCT00032515001;Name=Cc11_g10890;Ontology_term=CC_evidence_code:ISS,GO:0008152,GO:0016787,CC_EC_number:3.1.1.3,PRODUCT:Probable isoprenylcysteine alpha-carbonyl methylesterase ICMEL1,CC_functional_completeness:complete,CC_gene:ICMEL1,CC_gene:ICME,CC_gene:ICMEL2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032515001~ Probable isoprenylcysteine alpha-carbonyl methylesterase ICMEL1~ ICMEL1~ complete;original_location=join(3057568..3057986%2C3060061..3060137%2C3060329..3060398%2C3060554..3060634%2C3061093..3061167%2C3061509..3061610%2C3061696..3061836%2C3062952..3063017%2C3063108..3063251%2C3063402..3063492%2C3063849..3064010);owner=coffea | |
| 66763 chr11 manual_curation exon 28284680 28285445 . - . Parent=GSCOCT00032515001 | |
| 66764 chr11 manual_curation exon 28282529 28282605 . - . Parent=GSCOCT00032515001 | |
| 66765 chr11 manual_curation exon 28282268 28282337 . - . Parent=GSCOCT00032515001 | |
| 66766 chr11 manual_curation exon 28282032 28282112 . - . Parent=GSCOCT00032515001 | |
| 66767 chr11 manual_curation exon 28281499 28281573 . - . Parent=GSCOCT00032515001 | |
| 66768 chr11 manual_curation exon 28281056 28281157 . - . Parent=GSCOCT00032515001 | |
| 66769 chr11 manual_curation exon 28280830 28280970 . - . Parent=GSCOCT00032515001 | |
| 66770 chr11 manual_curation exon 28279649 28279714 . - . Parent=GSCOCT00032515001 | |
| 66771 chr11 manual_curation exon 28279415 28279558 . - . Parent=GSCOCT00032515001 | |
| 66772 chr11 manual_curation exon 28279174 28279264 . - . Parent=GSCOCT00032515001 | |
| 66773 chr11 manual_curation exon 28277912 28278817 . - . Parent=GSCOCT00032515001 | |
| 66774 chr11 manual_curation CDS 28284680 28285098 . - 0 Parent=GSCOCT00032515001 | |
| 66775 chr11 manual_curation CDS 28282529 28282605 . - 2 Parent=GSCOCT00032515001 | |
| 66776 chr11 manual_curation CDS 28282268 28282337 . - 1 Parent=GSCOCT00032515001 | |
| 66777 chr11 manual_curation CDS 28282032 28282112 . - 2 Parent=GSCOCT00032515001 | |
| 66778 chr11 manual_curation CDS 28281499 28281573 . - 2 Parent=GSCOCT00032515001 | |
| 66779 chr11 manual_curation CDS 28281056 28281157 . - 2 Parent=GSCOCT00032515001 | |
| 66780 chr11 manual_curation CDS 28280830 28280970 . - 2 Parent=GSCOCT00032515001 | |
| 66781 chr11 manual_curation CDS 28279649 28279714 . - 2 Parent=GSCOCT00032515001 | |
| 66782 chr11 manual_curation CDS 28279415 28279558 . - 2 Parent=GSCOCT00032515001 | |
| 66783 chr11 manual_curation CDS 28279174 28279264 . - 2 Parent=GSCOCT00032515001 | |
| 66784 chr11 manual_curation CDS 28278656 28278817 . - 0 Parent=GSCOCT00032515001 | |
| 66785 chr11 manual_curation gene 28300158 28303381 . + . ID=GSCOCG00032514001;Name=Cc11_g10900 | |
| 66786 chr11 manual_curation mRNA 28300158 28303381 . + . ID=GSCOCT00032514001;Parent=GSCOCG00032514001;Name=Cc11_g10900 | |
| 66787 chr11 manual_curation polypeptide 28300266 28303381 . + . ID=GSCOCP00032514001;Dbxref=InterPro:IPR004331,PFAM:PF03105,PROFILE:PS51382,SwissProt:Q651J5,SwissProt:Q657S5,SwissProt:Q93ZF5,TAIR:AT1G26730.1,TAIR:AT1G68740.1,TAIR:AT3G23430.1,TrEMBL:B9HWP3,TrEMBL:D7T9D4,TrEMBL:I1J6T3;Derives_from=GSCOCT00032514001;Name=Cc11_g10900;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Phosphate transporter PHO1 homolog 1,CC_functional_completeness:fragment,CC_gene:PHO1-H1,CC_gene:PHO1-1,CC_gene:PHO1-3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032514001~ Phosphate transporter PHO1 homolog 1~ PHO1-H1~ fragment;original_location=complement(join(3042176..3042400%2C3041690..3041990%2C3041015..3041423%2C3040858..3040906%2C3040684..3040755%2C3040242..3040371%2C3039285..3039445));owner=coffea | |
| 66788 chr11 manual_curation exon 28303221 28303381 . + . Parent=GSCOCT00032514001 | |
| 66789 chr11 manual_curation exon 28302295 28302424 . + . Parent=GSCOCT00032514001 | |
| 66790 chr11 manual_curation exon 28301911 28301982 . + . Parent=GSCOCT00032514001 | |
| 66791 chr11 manual_curation exon 28301760 28301808 . + . Parent=GSCOCT00032514001 | |
| 66792 chr11 manual_curation exon 28301243 28301651 . + . Parent=GSCOCT00032514001 | |
| 66793 chr11 manual_curation exon 28300676 28300976 . + . Parent=GSCOCT00032514001 | |
| 66794 chr11 manual_curation exon 28300158 28300490 . + . Parent=GSCOCT00032514001 | |
| 66795 chr11 manual_curation CDS 28303221 28303381 . + 1 Parent=GSCOCT00032514001 | |
| 66796 chr11 manual_curation CDS 28302295 28302424 . + 0 Parent=GSCOCT00032514001 | |
| 66797 chr11 manual_curation CDS 28301911 28301982 . + 0 Parent=GSCOCT00032514001 | |
| 66798 chr11 manual_curation CDS 28301760 28301808 . + 2 Parent=GSCOCT00032514001 | |
| 66799 chr11 manual_curation CDS 28301243 28301651 . + 1 Parent=GSCOCT00032514001 | |
| 66800 chr11 manual_curation CDS 28300676 28300976 . + 0 Parent=GSCOCT00032514001 | |
| 66801 chr11 manual_curation CDS 28300266 28300490 . + 0 Parent=GSCOCT00032514001 | |
| 66802 chr11 manual_curation gene 28303439 28305243 . + . ID=GSCOCG00032513001;Name=Cc11_g10910 | |
| 66803 chr11 manual_curation mRNA 28303439 28305243 . + . ID=GSCOCT00032513001;Parent=GSCOCG00032513001;Name=Cc11_g10910 | |
| 66804 chr11 manual_curation polypeptide 28303439 28305243 . + . ID=GSCOCP00032513001;Dbxref=InterPro:IPR004342,PFAM:PF03124,PROFILE:PS51380,SwissProt:Q651J5,SwissProt:Q657S5,SwissProt:Q93ZF5,TAIR:AT1G68740.1,TAIR:AT3G23430.1,TAIR:AT3G29060.1,TrEMBL:B9HWP3,TrEMBL:B9RL98,TrEMBL:D7T9D4;Derives_from=GSCOCT00032513001;Name=Cc11_g10910;Ontology_term=CC_evidence_code:ISS,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Phosphate transporter PHO1 homolog 1,CC_functional_completeness:fragment,CC_gene:PHO1-H1,CC_gene:PHO1-1,CC_gene:PHO1-3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032513001~ Phosphate transporter PHO1 homolog 1~ PHO1-H1~ fragment;original_location=complement(join(3038982..3039227%2C3038728..3038877%2C3038433..3038585%2C3038050..3038328%2C3037666..3037802%2C3037423..3037513));owner=coffea | |
| 66805 chr11 manual_curation exon 28305153 28305243 . + . Parent=GSCOCT00032513001 | |
| 66806 chr11 manual_curation exon 28304864 28305000 . + . Parent=GSCOCT00032513001 | |
| 66807 chr11 manual_curation exon 28304338 28304616 . + . Parent=GSCOCT00032513001 | |
| 66808 chr11 manual_curation exon 28304081 28304233 . + . Parent=GSCOCT00032513001 | |
| 66809 chr11 manual_curation exon 28303789 28303938 . + . Parent=GSCOCT00032513001 | |
| 66810 chr11 manual_curation exon 28303439 28303684 . + . Parent=GSCOCT00032513001 | |
| 66811 chr11 manual_curation CDS 28305153 28305243 . + 2 Parent=GSCOCT00032513001 | |
| 66812 chr11 manual_curation CDS 28304864 28305000 . + 0 Parent=GSCOCT00032513001 | |
| 66813 chr11 manual_curation CDS 28304338 28304616 . + 0 Parent=GSCOCT00032513001 | |
| 66814 chr11 manual_curation CDS 28304081 28304233 . + 0 Parent=GSCOCT00032513001 | |
| 66815 chr11 manual_curation CDS 28303789 28303938 . + 0 Parent=GSCOCT00032513001 | |
| 66816 chr11 manual_curation CDS 28303439 28303684 . + 0 Parent=GSCOCT00032513001 | |
| 66817 chr11 manual_curation gene 28330563 28333841 . - . ID=GSCOCG00032508001;Name=Cc11_g10920 | |
| 66818 chr11 manual_curation mRNA 28330563 28333841 . - . ID=GSCOCT00032508001;Parent=GSCOCG00032508001;Name=Cc11_g10920 | |
| 66819 chr11 manual_curation polypeptide 28330563 28333841 . - . ID=GSCOCP00032508001;Dbxref=InterPro:IPR002125,InterPro:IPR016193,PFAM:PF00383,SUPERFAMILY:SSF53927,SwissProt:Q9S7I0,TAIR:AT1G68720.1,TrEMBL:B9HIU1,TrEMBL:B9RL99,TrEMBL:F6HFR0;Derives_from=GSCOCT00032508001;Name=Cc11_g10920;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008270,GO:0016787,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:TADA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032508001~ Putative uncharacterized protein~ TADA~ fragment;original_location=join(3008825..3009465%2C3009586..3009711%2C3011113..3012103);owner=coffea | |
| 66820 chr11 manual_curation exon 28333201 28333841 . - . Parent=GSCOCT00032508001 | |
| 66821 chr11 manual_curation exon 28332955 28333080 . - . Parent=GSCOCT00032508001 | |
| 66822 chr11 manual_curation exon 28330563 28331553 . - . Parent=GSCOCT00032508001 | |
| 66823 chr11 manual_curation CDS 28333201 28333841 . - 0 Parent=GSCOCT00032508001 | |
| 66824 chr11 manual_curation CDS 28332955 28333080 . - 2 Parent=GSCOCT00032508001 | |
| 66825 chr11 manual_curation CDS 28330563 28331553 . - 2 Parent=GSCOCT00032508001 | |
| 66826 chr11 manual_curation gene 28334396 28335998 . - . ID=GSCOCG00032507001;Name=Cc11_g10930 | |
| 66827 chr11 manual_curation mRNA 28334396 28335998 . - . ID=GSCOCT00032507001;Parent=GSCOCG00032507001;Name=Cc11_g10930 | |
| 66828 chr11 manual_curation polypeptide 28334396 28335962 . - . ID=GSCOCP00032507001;Dbxref=InterPro:IPR005174,PFAM:PF03478,TrEMBL:F6H6K2,TrEMBL:G7K9R1,TrEMBL:G7K9R3;Derives_from=GSCOCT00032507001;Name=Cc11_g10930;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032507001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=join(3006704..3006776%2C3007075..3008270);owner=coffea | |
| 66829 chr11 manual_curation exon 28335890 28335998 . - . Parent=GSCOCT00032507001 | |
| 66830 chr11 manual_curation exon 28334396 28335591 . - . Parent=GSCOCT00032507001 | |
| 66831 chr11 manual_curation CDS 28335890 28335962 . - 0 Parent=GSCOCT00032507001 | |
| 66832 chr11 manual_curation CDS 28334396 28335591 . - 1 Parent=GSCOCT00032507001 | |
| 66833 chr11 manual_curation gene 28338437 28340448 . + . ID=GSCOCG00032506001;Name=Cc11_g10940 | |
| 66834 chr11 manual_curation mRNA 28338437 28340448 . + . ID=GSCOCT00032506001;Parent=GSCOCG00032506001;Name=Cc11_g10940 | |
| 66835 chr11 manual_curation polypeptide 28338544 28340347 . + . ID=GSCOCP00032506001;Dbxref=InterPro:IPR007853,PANTHER:PTHR20922,PFAM:PF05180,TAIR:AT1G68730.1,TAIR:AT5G27280.1,TrEMBL:B9HWP4,TrEMBL:C6TDD2,TrEMBL:I1JER3;Derives_from=GSCOCT00032506001;Name=Cc11_g10940;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Predicted protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032506001~ Putative Predicted protein~ unknown_gene~ complete;original_location=complement(join(3003968..3004122%2C3003542..3003674%2C3003022..3003150%2C3002319..3002426));owner=coffea | |
| 66836 chr11 manual_curation exon 28340240 28340448 . + . Parent=GSCOCT00032506001 | |
| 66837 chr11 manual_curation exon 28339516 28339644 . + . Parent=GSCOCT00032506001 | |
| 66838 chr11 manual_curation exon 28338992 28339124 . + . Parent=GSCOCT00032506001 | |
| 66839 chr11 manual_curation exon 28338437 28338698 . + . Parent=GSCOCT00032506001 | |
| 66840 chr11 manual_curation CDS 28340240 28340347 . + 0 Parent=GSCOCT00032506001 | |
| 66841 chr11 manual_curation CDS 28339516 28339644 . + 0 Parent=GSCOCT00032506001 | |
| 66842 chr11 manual_curation CDS 28338992 28339124 . + 2 Parent=GSCOCT00032506001 | |
| 66843 chr11 manual_curation CDS 28338544 28338698 . + 0 Parent=GSCOCT00032506001 | |
| 66844 chr11 manual_curation gene 28340561 28341490 . - . ID=GSCOCG00032505001;Name=Cc11_g10950 | |
| 66845 chr11 manual_curation mRNA 28340561 28341490 . - . ID=GSCOCT00032505001;Parent=GSCOCG00032505001;Name=Cc11_g10950 | |
| 66846 chr11 manual_curation polypeptide 28340561 28341490 . - . ID=GSCOCP00032505001;Derives_from=GSCOCT00032505001;Name=Cc11_g10950;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032505001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(3001176..3001889%2C3002010..3002105);owner=coffea | |
| 66847 chr11 manual_curation exon 28340777 28341490 . - . Parent=GSCOCT00032505001 | |
| 66848 chr11 manual_curation exon 28340561 28340656 . - . Parent=GSCOCT00032505001 | |
| 66849 chr11 manual_curation CDS 28340777 28341490 . - 0 Parent=GSCOCT00032505001 | |
| 66850 chr11 manual_curation CDS 28340561 28340656 . - 0 Parent=GSCOCT00032505001 | |
| 66851 chr11 manual_curation gene 28342826 28346730 . - . ID=GSCOCG00032504001;Name=Cc11_g10960 | |
| 66852 chr11 manual_curation mRNA 28342826 28346730 . - . ID=GSCOCT00032504001;Parent=GSCOCG00032504001;Name=Cc11_g10960 | |
| 66853 chr11 manual_curation polypeptide 28343255 28345466 . - . ID=GSCOCP00032504001;Dbxref=InterPro:IPR002125,InterPro:IPR016193,PFAM:PF00383,SUPERFAMILY:SSF53927,SwissProt:P0DA21,SwissProt:Q8P2R7,SwissProt:Q9S7I0,TAIR:AT1G48175.1,TAIR:AT1G68720.1,TAIR:AT5G28050.2,TrEMBL:B9RL99,TrEMBL:I1J6T8,TrEMBL:I1JEQ9;Derives_from=GSCOCT00032504001;Name=Cc11_g10960;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008270,GO:0016787,CC_EC_number:3.5.4.3,PRODUCT:tRNA-specific adenosine deaminase%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:TADA,CC_gene:spyM18_0196,CC_gene:tadA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032504001~ tRNA-specific adenosine deaminase%2C chloroplastic~ TADA~ fragment;original_location=join(2997200..2997306%2C2997392..2997479%2C2998829..2998956%2C2999138..2999411);owner=coffea | |
| 66854 chr11 manual_curation exon 28345360 28346730 . - . Parent=GSCOCT00032504001 | |
| 66855 chr11 manual_curation exon 28345187 28345274 . - . Parent=GSCOCT00032504001 | |
| 66856 chr11 manual_curation exon 28343710 28343837 . - . Parent=GSCOCT00032504001 | |
| 66857 chr11 manual_curation exon 28342826 28343528 . - . Parent=GSCOCT00032504001 | |
| 66858 chr11 manual_curation CDS 28345360 28345466 . - 0 Parent=GSCOCT00032504001 | |
| 66859 chr11 manual_curation CDS 28345187 28345274 . - 2 Parent=GSCOCT00032504001 | |
| 66860 chr11 manual_curation CDS 28343710 28343837 . - 0 Parent=GSCOCT00032504001 | |
| 66861 chr11 manual_curation CDS 28343255 28343528 . - 2 Parent=GSCOCT00032504001 | |
| 66862 chr11 manual_curation gene 28365185 28372591 . + . ID=GSCOCG00032502001;Name=Cc11_g10970 | |
| 66863 chr11 manual_curation mRNA 28365185 28372591 . + . ID=GSCOCT00032502001;Parent=GSCOCG00032502001;Name=Cc11_g10970 | |
| 66864 chr11 manual_curation polypeptide 28365980 28372132 . + . ID=GSCOCP00032502001;Dbxref=InterPro:IPR001757,InterPro:IPR005834,InterPro:IPR006539,InterPro:IPR008250,InterPro:IPR018303,PANTHER:PTHR11939,PFAM:PF00122,PFAM:PF00702,PRINTS:PR00119,PROSITE:PS00154,SwissProt:Q9LI83,SwissProt:Q9SAF5,SwissProt:Q9SX33,TAIR:AT1G13210.1,TAIR:AT1G68710.1,TAIR:AT3G25610.1,TIGRFAMs:TIGR01494,TIGRFAMs:TIGR01652,TrEMBL:D7KWF3,TrEMBL:F6HFR1,TrEMBL:I1JEQ6;Derives_from=GSCOCT00032502001;Name=Cc11_g10970;Ontology_term=CC_evidence_code:ISS,GO:0000287,GO:0003824,GO:0004012,GO:0005524,GO:0006754,GO:0008152,GO:0015914,GO:0016020,GO:0016021,CC_EC_number:3.6.3.1,PRODUCT:Putative phospholipid-transporting ATPase 9,CC_functional_completeness:complete,CC_gene:ALA9,CC_gene:ALA10,CC_gene:ALA11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032502001~ Putative phospholipid-transporting ATPase 9~ ALA9~ complete;original_location=complement(join(2976276..2976686%2C2974409..2975754%2C2974042..2974152%2C2973619..2973895%2C2973421..2973509%2C2973222..2973330%2C2972441..2972641%2C2972209..2972334%2C2972008..2972106%2C2971615..2971806%2C2970534..2971166));owner=coffea | |
| 66865 chr11 manual_curation exon 28371500 28372591 . + . Parent=GSCOCT00032502001 | |
| 66866 chr11 manual_curation exon 28370860 28371051 . + . Parent=GSCOCT00032502001 | |
| 66867 chr11 manual_curation exon 28370560 28370658 . + . Parent=GSCOCT00032502001 | |
| 66868 chr11 manual_curation exon 28370332 28370457 . + . Parent=GSCOCT00032502001 | |
| 66869 chr11 manual_curation exon 28370025 28370225 . + . Parent=GSCOCT00032502001 | |
| 66870 chr11 manual_curation exon 28369336 28369444 . + . Parent=GSCOCT00032502001 | |
| 66871 chr11 manual_curation exon 28369157 28369245 . + . Parent=GSCOCT00032502001 | |
| 66872 chr11 manual_curation exon 28368771 28369047 . + . Parent=GSCOCT00032502001 | |
| 66873 chr11 manual_curation exon 28368514 28368624 . + . Parent=GSCOCT00032502001 | |
| 66874 chr11 manual_curation exon 28366912 28368257 . + . Parent=GSCOCT00032502001 | |
| 66875 chr11 manual_curation exon 28365185 28366390 . + . Parent=GSCOCT00032502001 | |
| 66876 chr11 manual_curation CDS 28371500 28372132 . + 0 Parent=GSCOCT00032502001 | |
| 66877 chr11 manual_curation CDS 28370860 28371051 . + 0 Parent=GSCOCT00032502001 | |
| 66878 chr11 manual_curation CDS 28370560 28370658 . + 0 Parent=GSCOCT00032502001 | |
| 66879 chr11 manual_curation CDS 28370332 28370457 . + 0 Parent=GSCOCT00032502001 | |
| 66880 chr11 manual_curation CDS 28370025 28370225 . + 0 Parent=GSCOCT00032502001 | |
| 66881 chr11 manual_curation CDS 28369336 28369444 . + 2 Parent=GSCOCT00032502001 | |
| 66882 chr11 manual_curation CDS 28369157 28369245 . + 0 Parent=GSCOCT00032502001 | |
| 66883 chr11 manual_curation CDS 28368771 28369047 . + 2 Parent=GSCOCT00032502001 | |
| 66884 chr11 manual_curation CDS 28368514 28368624 . + 2 Parent=GSCOCT00032502001 | |
| 66885 chr11 manual_curation CDS 28366912 28368257 . + 0 Parent=GSCOCT00032502001 | |
| 66886 chr11 manual_curation CDS 28365980 28366390 . + 0 Parent=GSCOCT00032502001 | |
| 66887 chr11 manual_curation gene 28373959 28374580 . - . ID=GSCOCG00032500001;Name=Cc11_g10980 | |
| 66888 chr11 manual_curation mRNA 28373959 28374580 . - . ID=GSCOCT00032500001;Parent=GSCOCG00032500001;Name=Cc11_g10980 | |
| 66889 chr11 manual_curation polypeptide 28374098 28374580 . - . ID=GSCOCP00032500001;Dbxref=GENE3D:G3DSA:1.10.238.10,InterPro:IPR002048,InterPro:IPR011992,InterPro:IPR018247,InterPro:IPR018248,InterPro:IPR018249,PFAM:PF00036,PROFILE:PS50222,PROSITE:PS00018,SMART:SM00054,SwissProt:Q6L5F4,SwissProt:Q9FZ75,SwissProt:Q9LI84,TAIR:AT1G18530.1,TAIR:AT1G32250.1,TAIR:AT3G25600.1,TrEMBL:B9HWP7,TrEMBL:B9RLA1,TrEMBL:D7T9D9;Derives_from=GSCOCT00032500001;Name=Cc11_g10980;Ontology_term=CC_evidence_code:ISS,GO:0005509,CC_EC_number:missing_EC_number,PRODUCT:Probable calcium-binding protein CML16,CC_functional_completeness:complete,CC_gene:CML16,CC_gene:CML15,CC_gene:CML14;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032500001~ Probable calcium-binding protein CML16~ CML16~ complete;original_location=2968086..2968568;owner=coffea | |
| 66890 chr11 manual_curation exon 28373959 28374580 . - . Parent=GSCOCT00032500001 | |
| 66891 chr11 manual_curation CDS 28374098 28374580 . - 0 Parent=GSCOCT00032500001 | |
| 66892 chr11 manual_curation gene 28377445 28378382 . - . ID=GSCOCG00032499001;Name=Cc11_g10990 | |
| 66893 chr11 manual_curation mRNA 28377445 28378382 . - . ID=GSCOCT00032499001;Parent=GSCOCG00032499001;Name=Cc11_g10990 | |
| 66894 chr11 manual_curation polypeptide 28377567 28378052 . - . ID=GSCOCP00032499001;Dbxref=TAIR:AT1G26140.1,TAIR:AT3G25597.1,TrEMBL:B9HIU3,TrEMBL:C6TLR9,TrEMBL:I1MMN7;Derives_from=GSCOCT00032499001;Name=Cc11_g10990;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B LOCATED IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032499001~ Putative unknown protein%3B LOCATED IN: endomembrane system%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G26140.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink).~ unknown_gene~ complete;original_location=2964614..2965099;owner=coffea | |
| 66895 chr11 manual_curation exon 28377445 28378382 . - . Parent=GSCOCT00032499001 | |
| 66896 chr11 manual_curation CDS 28377567 28378052 . - 0 Parent=GSCOCT00032499001 | |
| 66897 chr11 manual_curation gene 28379135 28385617 . - . ID=GSCOCG00032498001;Name=Cc11_g11000 | |
| 66898 chr11 manual_curation mRNA 28379135 28385617 . - . ID=GSCOCT00032498001;Parent=GSCOCG00032498001;Name=Cc11_g11000 | |
| 66899 chr11 manual_curation polypeptide 28379411 28384744 . - . ID=GSCOCP00032498001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q9C660,SwissProt:Q9FFW5,SwissProt:Q9SX31,TAIR:AT1G26150.1,TAIR:AT1G68690.1,TAIR:AT5G38560.1,TrEMBL:B9HIU4,TrEMBL:B9RLA3,TrEMBL:D7T9E0;Derives_from=GSCOCT00032498001;Name=Cc11_g11000;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:PERK9,CC_gene:PERK8,CC_gene:PERK10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032498001~ Hypothetical protein~ PERK9~ missing_functional_completeness;original_location=join(2957922..2959191%2C2959340..2959750%2C2959834..2959920%2C2960556..2960626%2C2960706..2960782%2C2960889..2961036%2C2962790..2962951%2C2963055..2963255);owner=coffea | |
| 66900 chr11 manual_curation exon 28383475 28385617 . - . Parent=GSCOCT00032498001 | |
| 66901 chr11 manual_curation exon 28382916 28383326 . - . Parent=GSCOCT00032498001 | |
| 66902 chr11 manual_curation exon 28382746 28382832 . - . Parent=GSCOCT00032498001 | |
| 66903 chr11 manual_curation exon 28382040 28382110 . - . Parent=GSCOCT00032498001 | |
| 66904 chr11 manual_curation exon 28381884 28381960 . - . Parent=GSCOCT00032498001 | |
| 66905 chr11 manual_curation exon 28381630 28381777 . - . Parent=GSCOCT00032498001 | |
| 66906 chr11 manual_curation exon 28379715 28379876 . - . Parent=GSCOCT00032498001 | |
| 66907 chr11 manual_curation exon 28379135 28379611 . - . Parent=GSCOCT00032498001 | |
| 66908 chr11 manual_curation CDS 28383475 28384744 . - 0 Parent=GSCOCT00032498001 | |
| 66909 chr11 manual_curation CDS 28382916 28383326 . - 1 Parent=GSCOCT00032498001 | |
| 66910 chr11 manual_curation CDS 28382746 28382832 . - 1 Parent=GSCOCT00032498001 | |
| 66911 chr11 manual_curation CDS 28382040 28382110 . - 1 Parent=GSCOCT00032498001 | |
| 66912 chr11 manual_curation CDS 28381884 28381960 . - 0 Parent=GSCOCT00032498001 | |
| 66913 chr11 manual_curation CDS 28381630 28381777 . - 2 Parent=GSCOCT00032498001 | |
| 66914 chr11 manual_curation CDS 28379715 28379876 . - 0 Parent=GSCOCT00032498001 | |
| 66915 chr11 manual_curation CDS 28379411 28379611 . - 0 Parent=GSCOCT00032498001 | |
| 66916 chr11 manual_curation gene 28389248 28393896 . - . ID=GSCOCG00032497001;Name=Cc11_g11010 | |
| 66917 chr11 manual_curation mRNA 28389248 28393896 . - . ID=GSCOCT00032497001;Parent=GSCOCG00032497001;Name=Cc11_g11010 | |
| 66918 chr11 manual_curation polypeptide 28390324 28393730 . - . ID=GSCOCP00032497001;Dbxref=InterPro:IPR003607,InterPro:IPR006674,PFAM:PF01966,SMART:SM00471,SwissProt:P87242,SwissProt:Q1LUI2,SwissProt:Q54FK1,TAIR:AT1G26160.1,TAIR:AT2G23820.2,TrEMBL:B6TWI3,TrEMBL:Q93ZV1;Derives_from=GSCOCT00032497001;Name=Cc11_g11010;Ontology_term=CC_evidence_code:ISS,GO:0003824,CC_EC_number:missing_EC_number,PRODUCT:Putative HD domain-containing protein C4G3.17,CC_functional_completeness:modules,CC_gene:SPCC4G3.17,CC_gene:hddc2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032497001~ Putative HD domain-containing protein C4G3.17~ SPCC4G3.17~ modules;original_location=join(2948936..2949223%2C2950252..2950376%2C2950488..2950525%2C2951352..2951462%2C2951551..2951630%2C2951758..2951794%2C2952102..2952143%2C2952257..2952342);owner=coffea | |
| 66919 chr11 manual_curation exon 28393443 28393896 . - . Parent=GSCOCT00032497001 | |
| 66920 chr11 manual_curation exon 28392290 28392414 . - . Parent=GSCOCT00032497001 | |
| 66921 chr11 manual_curation exon 28392141 28392178 . - . Parent=GSCOCT00032497001 | |
| 66922 chr11 manual_curation exon 28391204 28391314 . - . Parent=GSCOCT00032497001 | |
| 66923 chr11 manual_curation exon 28391036 28391115 . - . Parent=GSCOCT00032497001 | |
| 66924 chr11 manual_curation exon 28390872 28390908 . - . Parent=GSCOCT00032497001 | |
| 66925 chr11 manual_curation exon 28390523 28390564 . - . Parent=GSCOCT00032497001 | |
| 66926 chr11 manual_curation exon 28389248 28390409 . - . Parent=GSCOCT00032497001 | |
| 66927 chr11 manual_curation CDS 28393443 28393730 . - 0 Parent=GSCOCT00032497001 | |
| 66928 chr11 manual_curation CDS 28392290 28392414 . - 0 Parent=GSCOCT00032497001 | |
| 66929 chr11 manual_curation CDS 28392141 28392178 . - 2 Parent=GSCOCT00032497001 | |
| 66930 chr11 manual_curation CDS 28391204 28391314 . - 1 Parent=GSCOCT00032497001 | |
| 66931 chr11 manual_curation CDS 28391036 28391115 . - 1 Parent=GSCOCT00032497001 | |
| 66932 chr11 manual_curation CDS 28390872 28390908 . - 0 Parent=GSCOCT00032497001 | |
| 66933 chr11 manual_curation CDS 28390523 28390564 . - 1 Parent=GSCOCT00032497001 | |
| 66934 chr11 manual_curation CDS 28390324 28390409 . - 1 Parent=GSCOCT00032497001 | |
| 66935 chr11 manual_curation gene 28405212 28406063 . + . ID=GSCOCG00032494001;Name=Cc11_g11020 | |
| 66936 chr11 manual_curation mRNA 28405212 28406063 . + . ID=GSCOCT00032494001;Parent=GSCOCG00032494001;Name=Cc11_g11020 | |
| 66937 chr11 manual_curation polypeptide 28405212 28406063 . + . ID=GSCOCP00032494001;Dbxref=TAIR:AT4G17430.1,TrEMBL:B9GYL4,TrEMBL:B9S5G7,TrEMBL:G7LAH6;Derives_from=GSCOCT00032494001;Name=Cc11_g11020;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:O-fucosyltransferase family protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032494001~ O-fucosyltransferase family protein~ unknown_gene~ fragment;original_location=complement(2936603..2937454);owner=coffea | |
| 66938 chr11 manual_curation exon 28405212 28406063 . + . Parent=GSCOCT00032494001 | |
| 66939 chr11 manual_curation CDS 28405212 28406063 . + 0 Parent=GSCOCT00032494001 | |
| 66940 chr11 manual_curation gene 28413714 28414498 . - . ID=GSCOCG00032492001;Name=Cc11_g11030 | |
| 66941 chr11 manual_curation mRNA 28413714 28414498 . - . ID=GSCOCT00032492001;Parent=GSCOCG00032492001;Name=Cc11_g11030 | |
| 66942 chr11 manual_curation polypeptide 28413926 28414498 . - . ID=GSCOCP00032492001;Dbxref=InterPro:IPR001841,InterPro:IPR018957,PFAM:PF00097,PROFILE:PS50089,SMART:SM00184,TAIR:AT1G63840.1,TrEMBL:A5B787,TrEMBL:D7T9E5,TrEMBL:D7T9E7;Derives_from=GSCOCT00032492001;Name=Cc11_g11030;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032492001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=2928168..2928740;owner=coffea | |
| 66943 chr11 manual_curation exon 28413714 28414498 . - . Parent=GSCOCT00032492001 | |
| 66944 chr11 manual_curation CDS 28413926 28414498 . - 0 Parent=GSCOCT00032492001 | |
| 66945 chr11 manual_curation gene 28420001 28436034 . - . ID=GSCOCG00032491001;Name=Cc11_g11040 | |
| 66946 chr11 manual_curation mRNA 28420001 28436034 . - . ID=GSCOCT00032491001;Parent=GSCOCG00032491001;Name=Cc11_g11040 | |
| 66947 chr11 manual_curation polypeptide 28420338 28435808 . - . ID=GSCOCP00032491001;Dbxref=GENE3D:G3DSA:1.25.10.10,InterPro:IPR001494,InterPro:IPR011989,InterPro:IPR016024,PFAM:PF03810,PROFILE:PS50166,SUPERFAMILY:SSF48371,SwissProt:Q10297,SwissProt:Q91YE6,SwissProt:Q96P70,TAIR:AT1G26170.1,TrEMBL:D7KQS9,TrEMBL:D7T9F0,TrEMBL:F4IE40;Derives_from=GSCOCT00032491001;Name=Cc11_g11040;Ontology_term=CC_evidence_code:ISS,GO:0005488,GO:0006886,GO:0008565,CC_EC_number:missing_EC_number,PRODUCT:Putative Importin-9,CC_functional_completeness:complete,CC_gene:Ipo9,CC_gene:IPO9,CC_gene:kap114;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032491001~ Putative Importin-9~ Ipo9~ complete;original_location=join(2906858..2906969%2C2908073..2908150%2C2908305..2908393%2C2908637..2908808%2C2908922..2909037%2C2909971..2910057%2C2910153..2910269%2C2910363..2910426%2C2910556..2910698%2C2912075..2912122%2C2912224..2912292%2C2912848..2912923%2C2913884..2914014%2C2914828..2914887%2C2915093..2915162%2C2915463..2915527%2C2915606..2915667%2C2915749..2915911%2C2915980..2916037%2C2916144..2916256%2C2917548..2917625%2C2917719..2917781%2C2917899..2917994%2C2918130..2918239%2C2918952..2919141%2C2919405..2919519%2C2920580..2920692%2C2920771..2920848%2C2921579..2921644%2C2921729..2921860%2C2921963..2922016%2C2922106..2922186%2C2922278..2922328);owner=coffea | |
| 66948 chr11 manual_curation exon 28435697 28436034 . - . Parent=GSCOCT00032491001 | |
| 66949 chr11 manual_curation exon 28434516 28434593 . - . Parent=GSCOCT00032491001 | |
| 66950 chr11 manual_curation exon 28434273 28434361 . - . Parent=GSCOCT00032491001 | |
| 66951 chr11 manual_curation exon 28433858 28434029 . - . Parent=GSCOCT00032491001 | |
| 66952 chr11 manual_curation exon 28433629 28433744 . - . Parent=GSCOCT00032491001 | |
| 66953 chr11 manual_curation exon 28432609 28432695 . - . Parent=GSCOCT00032491001 | |
| 66954 chr11 manual_curation exon 28432397 28432513 . - . Parent=GSCOCT00032491001 | |
| 66955 chr11 manual_curation exon 28432240 28432303 . - . Parent=GSCOCT00032491001 | |
| 66956 chr11 manual_curation exon 28431968 28432110 . - . Parent=GSCOCT00032491001 | |
| 66957 chr11 manual_curation exon 28430544 28430591 . - . Parent=GSCOCT00032491001 | |
| 66958 chr11 manual_curation exon 28430374 28430442 . - . Parent=GSCOCT00032491001 | |
| 66959 chr11 manual_curation exon 28429743 28429818 . - . Parent=GSCOCT00032491001 | |
| 66960 chr11 manual_curation exon 28428652 28428782 . - . Parent=GSCOCT00032491001 | |
| 66961 chr11 manual_curation exon 28427779 28427838 . - . Parent=GSCOCT00032491001 | |
| 66962 chr11 manual_curation exon 28427504 28427573 . - . Parent=GSCOCT00032491001 | |
| 66963 chr11 manual_curation exon 28427139 28427203 . - . Parent=GSCOCT00032491001 | |
| 66964 chr11 manual_curation exon 28426999 28427060 . - . Parent=GSCOCT00032491001 | |
| 66965 chr11 manual_curation exon 28426755 28426917 . - . Parent=GSCOCT00032491001 | |
| 66966 chr11 manual_curation exon 28426629 28426686 . - . Parent=GSCOCT00032491001 | |
| 66967 chr11 manual_curation exon 28426410 28426522 . - . Parent=GSCOCT00032491001 | |
| 66968 chr11 manual_curation exon 28425041 28425118 . - . Parent=GSCOCT00032491001 | |
| 66969 chr11 manual_curation exon 28424885 28424947 . - . Parent=GSCOCT00032491001 | |
| 66970 chr11 manual_curation exon 28424672 28424767 . - . Parent=GSCOCT00032491001 | |
| 66971 chr11 manual_curation exon 28424427 28424536 . - . Parent=GSCOCT00032491001 | |
| 66972 chr11 manual_curation exon 28423525 28423714 . - . Parent=GSCOCT00032491001 | |
| 66973 chr11 manual_curation exon 28423147 28423261 . - . Parent=GSCOCT00032491001 | |
| 66974 chr11 manual_curation exon 28421974 28422086 . - . Parent=GSCOCT00032491001 | |
| 66975 chr11 manual_curation exon 28421818 28421895 . - . Parent=GSCOCT00032491001 | |
| 66976 chr11 manual_curation exon 28421022 28421087 . - . Parent=GSCOCT00032491001 | |
| 66977 chr11 manual_curation exon 28420806 28420937 . - . Parent=GSCOCT00032491001 | |
| 66978 chr11 manual_curation exon 28420650 28420703 . - . Parent=GSCOCT00032491001 | |
| 66979 chr11 manual_curation exon 28420480 28420560 . - . Parent=GSCOCT00032491001 | |
| 66980 chr11 manual_curation exon 28420001 28420388 . - . Parent=GSCOCT00032491001 | |
| 66981 chr11 manual_curation CDS 28435697 28435808 . - 0 Parent=GSCOCT00032491001 | |
| 66982 chr11 manual_curation CDS 28434516 28434593 . - 1 Parent=GSCOCT00032491001 | |
| 66983 chr11 manual_curation CDS 28434273 28434361 . - 1 Parent=GSCOCT00032491001 | |
| 66984 chr11 manual_curation CDS 28433858 28434029 . - 0 Parent=GSCOCT00032491001 | |
| 66985 chr11 manual_curation CDS 28433629 28433744 . - 1 Parent=GSCOCT00032491001 | |
| 66986 chr11 manual_curation CDS 28432609 28432695 . - 0 Parent=GSCOCT00032491001 | |
| 66987 chr11 manual_curation CDS 28432397 28432513 . - 0 Parent=GSCOCT00032491001 | |
| 66988 chr11 manual_curation CDS 28432240 28432303 . - 0 Parent=GSCOCT00032491001 | |
| 66989 chr11 manual_curation CDS 28431968 28432110 . - 1 Parent=GSCOCT00032491001 | |
| 66990 chr11 manual_curation CDS 28430544 28430591 . - 0 Parent=GSCOCT00032491001 | |
| 66991 chr11 manual_curation CDS 28430374 28430442 . - 0 Parent=GSCOCT00032491001 | |
| 66992 chr11 manual_curation CDS 28429743 28429818 . - 0 Parent=GSCOCT00032491001 | |
| 66993 chr11 manual_curation CDS 28428652 28428782 . - 1 Parent=GSCOCT00032491001 | |
| 66994 chr11 manual_curation CDS 28427779 28427838 . - 0 Parent=GSCOCT00032491001 | |
| 66995 chr11 manual_curation CDS 28427504 28427573 . - 0 Parent=GSCOCT00032491001 | |
| 66996 chr11 manual_curation CDS 28427139 28427203 . - 1 Parent=GSCOCT00032491001 | |
| 66997 chr11 manual_curation CDS 28426999 28427060 . - 0 Parent=GSCOCT00032491001 | |
| 66998 chr11 manual_curation CDS 28426755 28426917 . - 2 Parent=GSCOCT00032491001 | |
| 66999 chr11 manual_curation CDS 28426629 28426686 . - 0 Parent=GSCOCT00032491001 | |
| 67000 chr11 manual_curation CDS 28426410 28426522 . - 1 Parent=GSCOCT00032491001 | |
| 67001 chr11 manual_curation CDS 28425041 28425118 . - 0 Parent=GSCOCT00032491001 | |
| 67002 chr11 manual_curation CDS 28424885 28424947 . - 0 Parent=GSCOCT00032491001 | |
| 67003 chr11 manual_curation CDS 28424672 28424767 . - 0 Parent=GSCOCT00032491001 | |
| 67004 chr11 manual_curation CDS 28424427 28424536 . - 0 Parent=GSCOCT00032491001 | |
| 67005 chr11 manual_curation CDS 28423525 28423714 . - 2 Parent=GSCOCT00032491001 | |
| 67006 chr11 manual_curation CDS 28423147 28423261 . - 0 Parent=GSCOCT00032491001 | |
| 67007 chr11 manual_curation CDS 28421974 28422086 . - 1 Parent=GSCOCT00032491001 | |
| 67008 chr11 manual_curation CDS 28421818 28421895 . - 0 Parent=GSCOCT00032491001 | |
| 67009 chr11 manual_curation CDS 28421022 28421087 . - 0 Parent=GSCOCT00032491001 | |
| 67010 chr11 manual_curation CDS 28420806 28420937 . - 0 Parent=GSCOCT00032491001 | |
| 67011 chr11 manual_curation CDS 28420650 28420703 . - 0 Parent=GSCOCT00032491001 | |
| 67012 chr11 manual_curation CDS 28420480 28420560 . - 0 Parent=GSCOCT00032491001 | |
| 67013 chr11 manual_curation CDS 28420338 28420388 . - 0 Parent=GSCOCT00032491001 | |
| 67014 chr11 manual_curation gene 28437219 28440431 . - . ID=GSCOCG00032490001;Name=Cc11_g11050 | |
| 67015 chr11 manual_curation mRNA 28437219 28440431 . - . ID=GSCOCT00032490001;Parent=GSCOCG00032490001;Name=Cc11_g11050 | |
| 67016 chr11 manual_curation polypeptide 28437219 28440431 . - . ID=GSCOCP00032490001;Dbxref=InterPro:IPR010683,PFAM:PF06880,TAIR:AT1G13480.1,TAIR:AT1G13520.1,TAIR:AT1G13530.1,TrEMBL:B9HIS6,TrEMBL:B9HIS7,TrEMBL:B9RLA8;Derives_from=GSCOCT00032490001;Name=Cc11_g11050;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of unknown function (DUF1262),CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032490001~ Putative Protein of unknown function (DUF1262)~ unknown_gene~ modules;original_location=join(2902235..2902301%2C2902457..2902800%2C2903992..2904296%2C2904589..2905447);owner=coffea | |
| 67017 chr11 manual_curation exon 28440365 28440431 . - . Parent=GSCOCT00032490001 | |
| 67018 chr11 manual_curation exon 28439866 28440209 . - . Parent=GSCOCT00032490001 | |
| 67019 chr11 manual_curation exon 28438370 28438674 . - . Parent=GSCOCT00032490001 | |
| 67020 chr11 manual_curation exon 28437219 28438077 . - . Parent=GSCOCT00032490001 | |
| 67021 chr11 manual_curation CDS 28440365 28440431 . - 0 Parent=GSCOCT00032490001 | |
| 67022 chr11 manual_curation CDS 28439866 28440209 . - 1 Parent=GSCOCT00032490001 | |
| 67023 chr11 manual_curation CDS 28438370 28438674 . - 0 Parent=GSCOCT00032490001 | |
| 67024 chr11 manual_curation CDS 28437219 28438077 . - 2 Parent=GSCOCT00032490001 | |
| 67025 chr11 manual_curation gene 28441012 28443563 . - . ID=GSCOCG00032489001;Name=Cc11_g11060 | |
| 67026 chr11 manual_curation mRNA 28441012 28443563 . - . ID=GSCOCT00032489001;Parent=GSCOCG00032489001;Name=Cc11_g11060 | |
| 67027 chr11 manual_curation polypeptide 28441281 28443002 . - . ID=GSCOCP00032489001;Dbxref=InterPro:IPR010683,PFAM:PF06880,TAIR:AT1G13480.1,TAIR:AT1G13520.1,TAIR:AT1G13530.1,TrEMBL:B9RLA8,TrEMBL:D7T9F1,TrEMBL:D7T9F2;Derives_from=GSCOCT00032489001;Name=Cc11_g11060;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of unknown function (DUF1262),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032489001~ Putative Protein of unknown function (DUF1262)~ unknown_gene~ complete;original_location=join(2899664..2899980%2C2900521..2901385);owner=coffea | |
| 67028 chr11 manual_curation exon 28442686 28443563 . - . Parent=GSCOCT00032489001 | |
| 67029 chr11 manual_curation exon 28441012 28442145 . - . Parent=GSCOCT00032489001 | |
| 67030 chr11 manual_curation CDS 28442686 28443002 . - 0 Parent=GSCOCT00032489001 | |
| 67031 chr11 manual_curation CDS 28441281 28442145 . - 2 Parent=GSCOCT00032489001 | |
| 67032 chr11 manual_curation gene 28446405 28449356 . - . ID=GSCOCG00032488001;Name=Cc11_g11070 | |
| 67033 chr11 manual_curation mRNA 28446405 28449356 . - . ID=GSCOCT00032488001;Parent=GSCOCG00032488001;Name=Cc11_g11070 | |
| 67034 chr11 manual_curation polypeptide 28447111 28448924 . - . ID=GSCOCP00032488001;Dbxref=InterPro:IPR010683,PFAM:PF06880,TAIR:AT1G13480.1,TAIR:AT1G13520.1,TAIR:AT1G13530.1,TrEMBL:B9HIS6,TrEMBL:D7T9F1,TrEMBL:D7T9F2;Derives_from=GSCOCT00032488001;Name=Cc11_g11070;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of unknown function (DUF1262),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032488001~ Putative Protein of unknown function (DUF1262)~ unknown_gene~ complete;original_location=join(2893742..2894058%2C2894691..2895555);owner=coffea | |
| 67035 chr11 manual_curation exon 28449161 28449356 . - . Parent=GSCOCT00032488001 | |
| 67036 chr11 manual_curation exon 28448608 28449014 . - . Parent=GSCOCT00032488001 | |
| 67037 chr11 manual_curation exon 28446405 28447975 . - . Parent=GSCOCT00032488001 | |
| 67038 chr11 manual_curation CDS 28448608 28448924 . - 0 Parent=GSCOCT00032488001 | |
| 67039 chr11 manual_curation CDS 28447111 28447975 . - 2 Parent=GSCOCT00032488001 | |
| 67040 chr11 manual_curation gene 28450372 28452473 . - . ID=GSCOCG00032487001;Name=Cc11_g11080 | |
| 67041 chr11 manual_curation mRNA 28450372 28452473 . - . ID=GSCOCT00032487001;Parent=GSCOCG00032487001;Name=Cc11_g11080 | |
| 67042 chr11 manual_curation polypeptide 28450584 28451765 . - . ID=GSCOCP00032487001;Dbxref=TAIR:AT3G25590.1,TrEMBL:B9HWQ4,TrEMBL:F6HF35,TrEMBL:I1JEQ0;Derives_from=GSCOCT00032487001;Name=Cc11_g11080;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032487001~ Uncharacterized protein~ unknown_gene~ fragment;original_location=join(2890901..2891375%2C2891601..2891628%2C2891761..2892082);owner=coffea | |
| 67043 chr11 manual_curation exon 28451291 28452473 . - . Parent=GSCOCT00032487001 | |
| 67044 chr11 manual_curation exon 28451038 28451065 . - . Parent=GSCOCT00032487001 | |
| 67045 chr11 manual_curation exon 28450372 28450905 . - . Parent=GSCOCT00032487001 | |
| 67046 chr11 manual_curation CDS 28451291 28451765 . - 0 Parent=GSCOCT00032487001 | |
| 67047 chr11 manual_curation CDS 28451038 28451065 . - 1 Parent=GSCOCT00032487001 | |
| 67048 chr11 manual_curation CDS 28450584 28450905 . - 2 Parent=GSCOCT00032487001 | |
| 67049 chr11 manual_curation gene 28456767 28459832 . + . ID=GSCOCG00032486001;Name=Cc11_g11090 | |
| 67050 chr11 manual_curation mRNA 28456767 28459832 . + . ID=GSCOCT00032486001;Parent=GSCOCG00032486001;Name=Cc11_g11090 | |
| 67051 chr11 manual_curation polypeptide 28456860 28459626 . + . ID=GSCOCP00032486001;Dbxref=InterPro:IPR018710,PFAM:PF09991,TAIR:AT1G26180.1,TrEMBL:B9RLB2,TrEMBL:F6HF36,TrEMBL:I1JEP9;Derives_from=GSCOCT00032486001;Name=Cc11_g11090;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B CONTAINS InterPro DOMAIN/s,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032486001~ unknown protein%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2232%2C membrane (InterPro:IPR018710)%3B Has 285 Blast hits to 285 proteins in 90 species: Archae - 0%3B Bacteria - 140%3B Metazoa - 0%3B Fungi - 0%3B Plants - 40%3B Viruses - 0%3B Other Eukaryotes - 105 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(2885450..2885806%2C2884620..2884700%2C2884463..2884522%2C2884120..2884163%2C2883653..2883695%2C2883483..2883554%2C2883281..2883382%2C2883040..2883159));owner=coffea | |
| 67052 chr11 manual_curation exon 28459507 28459832 . + . Parent=GSCOCT00032486001 | |
| 67053 chr11 manual_curation exon 28459284 28459385 . + . Parent=GSCOCT00032486001 | |
| 67054 chr11 manual_curation exon 28459112 28459183 . + . Parent=GSCOCT00032486001 | |
| 67055 chr11 manual_curation exon 28458971 28459013 . + . Parent=GSCOCT00032486001 | |
| 67056 chr11 manual_curation exon 28458503 28458546 . + . Parent=GSCOCT00032486001 | |
| 67057 chr11 manual_curation exon 28458144 28458203 . + . Parent=GSCOCT00032486001 | |
| 67058 chr11 manual_curation exon 28457966 28458046 . + . Parent=GSCOCT00032486001 | |
| 67059 chr11 manual_curation exon 28456767 28457216 . + . Parent=GSCOCT00032486001 | |
| 67060 chr11 manual_curation CDS 28459507 28459626 . + 0 Parent=GSCOCT00032486001 | |
| 67061 chr11 manual_curation CDS 28459284 28459385 . + 0 Parent=GSCOCT00032486001 | |
| 67062 chr11 manual_curation CDS 28459112 28459183 . + 0 Parent=GSCOCT00032486001 | |
| 67063 chr11 manual_curation CDS 28458971 28459013 . + 2 Parent=GSCOCT00032486001 | |
| 67064 chr11 manual_curation CDS 28458503 28458546 . + 0 Parent=GSCOCT00032486001 | |
| 67065 chr11 manual_curation CDS 28458144 28458203 . + 0 Parent=GSCOCT00032486001 | |
| 67066 chr11 manual_curation CDS 28457966 28458046 . + 0 Parent=GSCOCT00032486001 | |
| 67067 chr11 manual_curation CDS 28456860 28457216 . + 0 Parent=GSCOCT00032486001 | |
| 67068 chr11 manual_curation gene 28459956 28468984 . - . ID=GSCOCG00032485001;Name=Cc11_g11100 | |
| 67069 chr11 manual_curation mRNA 28459956 28468984 . - . ID=GSCOCT00032485001;Parent=GSCOCG00032485001;Name=Cc11_g11100 | |
| 67070 chr11 manual_curation polypeptide 28460396 28468447 . - . ID=GSCOCP00032485001;Dbxref=InterPro:IPR000462,InterPro:IPR014472,PFAM:PF01066,PIR:PIRSF015665,PROSITE:PS00379,SwissProt:O13901,SwissProt:Q54XM0,SwissProt:Q550W1,TAIR:AT1G13560.1,TAIR:AT3G25585.2,TrEMBL:D7KQG9,TrEMBL:D7TAA7,TrEMBL:O04178;Derives_from=GSCOCT00032485001;Name=Cc11_g11100;Ontology_term=CC_evidence_code:ISS,GO:0008654,GO:0016020,CC_EC_number:2.7.8.2,PRODUCT:Putative Uncharacterized CDP-alcohol phosphatidyltransferase class-I family protein 3,CC_functional_completeness:complete,CC_gene:captC,CC_gene:captB,CC_gene:SPAC22A12.10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032485001~ Putative Uncharacterized CDP-alcohol phosphatidyltransferase class-I family protein 3~ captC~ complete;original_location=join(2874219..2874289%2C2875792..2875801%2C2875901..2875951%2C2876934..2877011%2C2877831..2877906%2C2878092..2878114%2C2878204..2878304%2C2878842..2878936%2C2879027..2879095%2C2879687..2879756%2C2880202..2880265%2C2880349..2880389%2C2880464..2880548%2C2880827..2880889%2C2881154..2881212%2C2881306..2881358%2C2881752..2881824%2C2882249..2882270);owner=coffea | |
| 67071 chr11 manual_curation exon 28468721 28468984 . - . Parent=GSCOCT00032485001 | |
| 67072 chr11 manual_curation exon 28460064 28460263 . - . Parent=GSCOCT00032485001 | |
| 67073 chr11 manual_curation exon 28459956 28460039 . - . Parent=GSCOCT00032485001 | |
| 67074 chr11 manual_curation exon 28468377 28468555 . - . Parent=GSCOCT00032485001 | |
| 67075 chr11 manual_curation exon 28466865 28466874 . - . Parent=GSCOCT00032485001 | |
| 67076 chr11 manual_curation exon 28466715 28466765 . - . Parent=GSCOCT00032485001 | |
| 67077 chr11 manual_curation exon 28465655 28465732 . - . Parent=GSCOCT00032485001 | |
| 67078 chr11 manual_curation exon 28464760 28464835 . - . Parent=GSCOCT00032485001 | |
| 67079 chr11 manual_curation exon 28464552 28464574 . - . Parent=GSCOCT00032485001 | |
| 67080 chr11 manual_curation exon 28464362 28464462 . - . Parent=GSCOCT00032485001 | |
| 67081 chr11 manual_curation exon 28463730 28463824 . - . Parent=GSCOCT00032485001 | |
| 67082 chr11 manual_curation exon 28463571 28463639 . - . Parent=GSCOCT00032485001 | |
| 67083 chr11 manual_curation exon 28462910 28462979 . - . Parent=GSCOCT00032485001 | |
| 67084 chr11 manual_curation exon 28462401 28462464 . - . Parent=GSCOCT00032485001 | |
| 67085 chr11 manual_curation exon 28462277 28462317 . - . Parent=GSCOCT00032485001 | |
| 67086 chr11 manual_curation exon 28462118 28462202 . - . Parent=GSCOCT00032485001 | |
| 67087 chr11 manual_curation exon 28461777 28461839 . - . Parent=GSCOCT00032485001 | |
| 67088 chr11 manual_curation exon 28461454 28461512 . - . Parent=GSCOCT00032485001 | |
| 67089 chr11 manual_curation exon 28461308 28461360 . - . Parent=GSCOCT00032485001 | |
| 67090 chr11 manual_curation exon 28460842 28460914 . - . Parent=GSCOCT00032485001 | |
| 67091 chr11 manual_curation exon 28460364 28460417 . - . Parent=GSCOCT00032485001 | |
| 67092 chr11 manual_curation CDS 28468377 28468447 . - 0 Parent=GSCOCT00032485001 | |
| 67093 chr11 manual_curation CDS 28466865 28466874 . - 2 Parent=GSCOCT00032485001 | |
| 67094 chr11 manual_curation CDS 28466715 28466765 . - 0 Parent=GSCOCT00032485001 | |
| 67095 chr11 manual_curation CDS 28465655 28465732 . - 0 Parent=GSCOCT00032485001 | |
| 67096 chr11 manual_curation CDS 28464760 28464835 . - 0 Parent=GSCOCT00032485001 | |
| 67097 chr11 manual_curation CDS 28464552 28464574 . - 1 Parent=GSCOCT00032485001 | |
| 67098 chr11 manual_curation CDS 28464362 28464462 . - 0 Parent=GSCOCT00032485001 | |
| 67099 chr11 manual_curation CDS 28463730 28463824 . - 2 Parent=GSCOCT00032485001 | |
| 67100 chr11 manual_curation CDS 28463571 28463639 . - 1 Parent=GSCOCT00032485001 | |
| 67101 chr11 manual_curation CDS 28462910 28462979 . - 1 Parent=GSCOCT00032485001 | |
| 67102 chr11 manual_curation CDS 28462401 28462464 . - 2 Parent=GSCOCT00032485001 | |
| 67103 chr11 manual_curation CDS 28462277 28462317 . - 0 Parent=GSCOCT00032485001 | |
| 67104 chr11 manual_curation CDS 28462118 28462202 . - 2 Parent=GSCOCT00032485001 | |
| 67105 chr11 manual_curation CDS 28461777 28461839 . - 0 Parent=GSCOCT00032485001 | |
| 67106 chr11 manual_curation CDS 28461454 28461512 . - 0 Parent=GSCOCT00032485001 | |
| 67107 chr11 manual_curation CDS 28461308 28461360 . - 2 Parent=GSCOCT00032485001 | |
| 67108 chr11 manual_curation CDS 28460842 28460914 . - 1 Parent=GSCOCT00032485001 | |
| 67109 chr11 manual_curation CDS 28460396 28460417 . - 2 Parent=GSCOCT00032485001 | |
| 67110 chr11 manual_curation gene 28477050 28478924 . - . ID=GSCOCG00032484001;Name=Cc11_g11110 | |
| 67111 chr11 manual_curation mRNA 28477050 28478924 . - . ID=GSCOCT00032484001;Parent=GSCOCG00032484001;Name=Cc11_g11110 | |
| 67112 chr11 manual_curation polypeptide 28477050 28478924 . - . ID=GSCOCP00032484001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR011009,InterPro:IPR020635,PFAM:PF07714,PROFILE:PS50011,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q3E8W4,SwissProt:Q9C660,SwissProt:Q9SR05,TAIR:AT2G23770.1,TAIR:AT2G33580.1,TAIR:AT3G21630.1,TrEMBL:B9HQC6,TrEMBL:B9STU7,TrEMBL:D3KU02;Derives_from=GSCOCT00032484001;Name=Cc11_g11110;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative protein kinase family protein / peptidoglycan-binding LysM domain-containing protein,CC_functional_completeness:complete,CC_gene:ANX1,CC_gene:PERK10,CC_gene:ANX2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032484001~ Putative protein kinase family protein / peptidoglycan-binding LysM domain-containing protein~ ANX1~ complete;original_location=2863742..2865616;owner=coffea | |
| 67113 chr11 manual_curation exon 28477050 28478924 . - . Parent=GSCOCT00032484001 | |
| 67114 chr11 manual_curation CDS 28477050 28478924 . - 0 Parent=GSCOCT00032484001 | |
| 67115 chr11 manual_curation gene 28485459 28487174 . + . ID=GSCOCG00032483001;Name=Cc11_g11120 | |
| 67116 chr11 manual_curation mRNA 28485459 28487174 . + . ID=GSCOCT00032483001;Parent=GSCOCG00032483001;Name=Cc11_g11120 | |
| 67117 chr11 manual_curation polypeptide 28486837 28487110 . + . ID=GSCOCP00032483001;Dbxref=InterPro:IPR012511,PFAM:PF08132,TAIR:AT3G02468.1,TAIR:AT3G25572.1,TAIR:AT5G15948.1,TrEMBL:Q39569,TrEMBL:Q8LLV4;Derives_from=GSCOCT00032483001;Name=Cc11_g11120;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:conserved peptide upstream open reading frame 10,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032483001~ conserved peptide upstream open reading frame 10~ unknown_gene~ complete;original_location=complement(join(2855695..2855829%2C2855556..2855576));owner=coffea | |
| 67118 chr11 manual_curation exon 28485675 28485759 . + . Parent=GSCOCT00032483001 | |
| 67119 chr11 manual_curation exon 28485459 28485561 . + . Parent=GSCOCT00032483001 | |
| 67120 chr11 manual_curation exon 28487090 28487174 . + . Parent=GSCOCT00032483001 | |
| 67121 chr11 manual_curation exon 28486819 28486971 . + . Parent=GSCOCT00032483001 | |
| 67122 chr11 manual_curation CDS 28487090 28487110 . + 0 Parent=GSCOCT00032483001 | |
| 67123 chr11 manual_curation CDS 28486837 28486971 . + 0 Parent=GSCOCT00032483001 | |
| 67124 chr11 manual_curation gene 28487271 28488788 . + . ID=GSCOCG00032482001;Name=Cc11_g11130 | |
| 67125 chr11 manual_curation mRNA 28487271 28488788 . + . ID=GSCOCT00032482001;Parent=GSCOCG00032482001;Name=Cc11_g11130 | |
| 67126 chr11 manual_curation polypeptide 28487271 28488347 . + . ID=GSCOCP00032482001;Dbxref=GENE3D:G3DSA:3.60.90.10,InterPro:IPR001985,InterPro:IPR016067,InterPro:IPR018166,InterPro:IPR018167,PANTHER:PTHR11570,PFAM:PF01536,PIR:PIRSF001355,PROSITE:PS01336,SUPERFAMILY:SSF56276,SwissProt:O04009,SwissProt:O80402,SwissProt:Q42679,TAIR:AT3G02470.1,TAIR:AT3G25570.1,TAIR:AT5G15950.1,TIGRFAMs:TIGR00535,TrEMBL:B9HWQ8,TrEMBL:F6HGG6,TrEMBL:Q7XZQ9;Derives_from=GSCOCT00032482001;Name=Cc11_g11130;Ontology_term=CC_evidence_code:ISS,GO:0004014,GO:0006597,GO:0008295,CC_EC_number:4.1.1.50,PRODUCT:S-adenosylmethionine decarboxylase proenzyme,CC_functional_completeness:complete,CC_gene:SAMDC,CC_gene:SAMDC1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032482001~ S-adenosylmethionine decarboxylase proenzyme~ SAMDC~ complete;original_location=complement(2854319..2855395);owner=coffea | |
| 67127 chr11 manual_curation exon 28487271 28488788 . + . Parent=GSCOCT00032482001 | |
| 67128 chr11 manual_curation CDS 28487271 28488347 . + 0 Parent=GSCOCT00032482001 | |
| 67129 chr11 manual_curation gene 28499825 28504071 . + . ID=GSCOCG00032481001;Name=Cc11_g11140 | |
| 67130 chr11 manual_curation mRNA 28499825 28504071 . + . ID=GSCOCT00032481001;Parent=GSCOCG00032481001;Name=Cc11_g11140 | |
| 67131 chr11 manual_curation polypeptide 28500297 28503656 . + . ID=GSCOCP00032481001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q0WVM4,SwissProt:Q8RY65,SwissProt:Q9LFS4,TAIR:AT2G23950.1,TAIR:AT3G25560.3,TAIR:AT5G16000.1,TrEMBL:B9HIT4,TrEMBL:D7TAB0,TrEMBL:Q0PW22;Derives_from=GSCOCT00032481001;Name=Cc11_g11140;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Protein NSP-INTERACTING KINASE 1,CC_functional_completeness:complete,CC_gene:NIK1,CC_gene:NIK2,CC_gene:At2g23950;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032481001~ Protein NSP-INTERACTING KINASE 1~ NIK1~ complete;original_location=complement(join(2842267..2842369%2C2842016..2842145%2C2841780..2841851%2C2841536..2841679%2C2841305..2841376%2C2841151..2841210%2C2840970..2841067%2C2840591..2840740%2C2840163..2840504%2C2839442..2839821%2C2839010..2839330));owner=coffea | |
| 67132 chr11 manual_curation exon 28503336 28504071 . + . Parent=GSCOCT00032481001 | |
| 67133 chr11 manual_curation exon 28502845 28503224 . + . Parent=GSCOCT00032481001 | |
| 67134 chr11 manual_curation exon 28502162 28502503 . + . Parent=GSCOCT00032481001 | |
| 67135 chr11 manual_curation exon 28501926 28502075 . + . Parent=GSCOCT00032481001 | |
| 67136 chr11 manual_curation exon 28501599 28501696 . + . Parent=GSCOCT00032481001 | |
| 67137 chr11 manual_curation exon 28501456 28501515 . + . Parent=GSCOCT00032481001 | |
| 67138 chr11 manual_curation exon 28501290 28501361 . + . Parent=GSCOCT00032481001 | |
| 67139 chr11 manual_curation exon 28500987 28501130 . + . Parent=GSCOCT00032481001 | |
| 67140 chr11 manual_curation exon 28500815 28500886 . + . Parent=GSCOCT00032481001 | |
| 67141 chr11 manual_curation exon 28500521 28500650 . + . Parent=GSCOCT00032481001 | |
| 67142 chr11 manual_curation exon 28499825 28500399 . + . Parent=GSCOCT00032481001 | |
| 67143 chr11 manual_curation CDS 28503336 28503656 . + 0 Parent=GSCOCT00032481001 | |
| 67144 chr11 manual_curation CDS 28502845 28503224 . + 1 Parent=GSCOCT00032481001 | |
| 67145 chr11 manual_curation CDS 28502162 28502503 . + 1 Parent=GSCOCT00032481001 | |
| 67146 chr11 manual_curation CDS 28501926 28502075 . + 1 Parent=GSCOCT00032481001 | |
| 67147 chr11 manual_curation CDS 28501599 28501696 . + 2 Parent=GSCOCT00032481001 | |
| 67148 chr11 manual_curation CDS 28501456 28501515 . + 2 Parent=GSCOCT00032481001 | |
| 67149 chr11 manual_curation CDS 28501290 28501361 . + 2 Parent=GSCOCT00032481001 | |
| 67150 chr11 manual_curation CDS 28500987 28501130 . + 2 Parent=GSCOCT00032481001 | |
| 67151 chr11 manual_curation CDS 28500815 28500886 . + 2 Parent=GSCOCT00032481001 | |
| 67152 chr11 manual_curation CDS 28500521 28500650 . + 1 Parent=GSCOCT00032481001 | |
| 67153 chr11 manual_curation CDS 28500297 28500399 . + 0 Parent=GSCOCT00032481001 | |
| 67154 chr11 manual_curation gene 28504207 28506731 . - . ID=GSCOCG00032480001;Name=Cc11_g11150 | |
| 67155 chr11 manual_curation mRNA 28504207 28506731 . - . ID=GSCOCT00032480001;Parent=GSCOCG00032480001;Name=Cc11_g11150 | |
| 67156 chr11 manual_curation polypeptide 28504458 28505965 . - . ID=GSCOCP00032480001;Dbxref=InterPro:IPR006566,InterPro:IPR013596,PFAM:PF08387,SMART:SM00579,SwissProt:Q6DBN6,SwissProt:Q9FM89,SwissProt:Q9FZ70,TAIR:AT1G13570.1,TAIR:AT1G51370.1,TAIR:AT5G56420.1,TrEMBL:B9HWR1,TrEMBL:B9RLB8,TrEMBL:I1JEP2;Derives_from=GSCOCT00032480001;Name=Cc11_g11150;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:F-box/FBD/LRR-repeat protein At1g13570,CC_functional_completeness:complete,CC_gene:At1g13570,CC_gene:At1g51370,CC_gene:At5g56420;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032480001~ F-box/FBD/LRR-repeat protein At1g13570~ At1g13570~ complete;original_location=join(2836701..2836807%2C2836889..2837513%2C2837663..2837821%2C2837909..2838208);owner=coffea | |
| 67157 chr11 manual_curation exon 28506602 28506731 . - . Parent=GSCOCT00032480001 | |
| 67158 chr11 manual_curation exon 28504207 28504289 . - . Parent=GSCOCT00032480001 | |
| 67159 chr11 manual_curation exon 28505859 28506003 . - . Parent=GSCOCT00032480001 | |
| 67160 chr11 manual_curation exon 28505153 28505777 . - . Parent=GSCOCT00032480001 | |
| 67161 chr11 manual_curation exon 28504845 28505003 . - . Parent=GSCOCT00032480001 | |
| 67162 chr11 manual_curation exon 28504395 28504757 . - . Parent=GSCOCT00032480001 | |
| 67163 chr11 manual_curation CDS 28505859 28505965 . - 0 Parent=GSCOCT00032480001 | |
| 67164 chr11 manual_curation CDS 28505153 28505777 . - 2 Parent=GSCOCT00032480001 | |
| 67165 chr11 manual_curation CDS 28504845 28505003 . - 0 Parent=GSCOCT00032480001 | |
| 67166 chr11 manual_curation CDS 28504458 28504757 . - 0 Parent=GSCOCT00032480001 | |
| 67167 chr11 manual_curation gene 28512389 28515419 . - . ID=GSCOCG00032479001;Name=Cc11_g11160 | |
| 67168 chr11 manual_curation mRNA 28512389 28515419 . - . ID=GSCOCT00032479001;Parent=GSCOCG00032479001;Name=Cc11_g11160 | |
| 67169 chr11 manual_curation polypeptide 28512813 28514278 . - . ID=GSCOCP00032479001;Dbxref=InterPro:IPR001810,InterPro:IPR022364,PFAM:PF00646,PROFILE:PS50181,SMART:SM00256,SUPERFAMILY:SSF81383,SwissProt:Q9FZ70,TAIR:AT1G13570.1,TAIR:AT3G59200.1,TAIR:AT5G56420.1,TrEMBL:B9MVG0,TrEMBL:B9R7N7,TrEMBL:D7TAB2;Derives_from=GSCOCT00032479001;Name=Cc11_g11160;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative F-box/FBD/LRR-repeat protein At1g13570,CC_functional_completeness:complete,CC_gene:At1g13570;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032479001~ Putative F-box/FBD/LRR-repeat protein At1g13570~ At1g13570~ complete;original_location=join(2828388..2829224%2C2829315..2829470%2C2829548..2829853);owner=coffea | |
| 67170 chr11 manual_curation exon 28513442 28515419 . - . Parent=GSCOCT00032479001 | |
| 67171 chr11 manual_curation exon 28513196 28513351 . - . Parent=GSCOCT00032479001 | |
| 67172 chr11 manual_curation exon 28512389 28513118 . - . Parent=GSCOCT00032479001 | |
| 67173 chr11 manual_curation CDS 28513442 28514278 . - 0 Parent=GSCOCT00032479001 | |
| 67174 chr11 manual_curation CDS 28513196 28513351 . - 0 Parent=GSCOCT00032479001 | |
| 67175 chr11 manual_curation CDS 28512813 28513118 . - 0 Parent=GSCOCT00032479001 | |
| 67176 chr11 manual_curation gene 28520611 28522896 . - . ID=GSCOCG00032478001;Name=Cc11_g11170 | |
| 67177 chr11 manual_curation mRNA 28520611 28522896 . - . ID=GSCOCT00032478001;Parent=GSCOCG00032478001;Name=Cc11_g11170 | |
| 67178 chr11 manual_curation polypeptide 28520823 28522547 . - . ID=GSCOCP00032478001;Dbxref=InterPro:IPR001810,InterPro:IPR006566,InterPro:IPR022364,PFAM:PF00646,PROFILE:PS50181,SMART:SM00256,SMART:SM00579,SUPERFAMILY:SSF81383,SwissProt:Q1PED9,SwissProt:Q9FZ70,SwissProt:Q9LX51,TAIR:AT1G13570.1,TAIR:AT3G59190.1,TAIR:AT3G59200.1,TrEMBL:D7TAB2,TrEMBL:G7I5T8,TrEMBL:G7I7N8;Derives_from=GSCOCT00032478001;Name=Cc11_g11170;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative F-box/FBD/LRR-repeat protein At1g13570,CC_functional_completeness:complete,CC_gene:At1g13570,CC_gene:At3g59200,CC_gene:At3g59190;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032478001~ Putative F-box/FBD/LRR-repeat protein At1g13570~ At1g13570~ complete;original_location=join(2820119..2820152%2C2820289..2821142%2C2821259..2821420%2C2821517..2821843);owner=coffea | |
| 67179 chr11 manual_curation exon 28522514 28522896 . - . Parent=GSCOCT00032478001 | |
| 67180 chr11 manual_curation exon 28521524 28522377 . - . Parent=GSCOCT00032478001 | |
| 67181 chr11 manual_curation exon 28521246 28521407 . - . Parent=GSCOCT00032478001 | |
| 67182 chr11 manual_curation exon 28520611 28521149 . - . Parent=GSCOCT00032478001 | |
| 67183 chr11 manual_curation CDS 28522514 28522547 . - 0 Parent=GSCOCT00032478001 | |
| 67184 chr11 manual_curation CDS 28521524 28522377 . - 1 Parent=GSCOCT00032478001 | |
| 67185 chr11 manual_curation CDS 28521246 28521407 . - 0 Parent=GSCOCT00032478001 | |
| 67186 chr11 manual_curation CDS 28520823 28521149 . - 0 Parent=GSCOCT00032478001 | |
| 67187 chr11 manual_curation gene 28524142 28531977 . - . ID=GSCOCG00032477001;Name=Cc11_g11180 | |
| 67188 chr11 manual_curation mRNA 28524142 28531977 . - . ID=GSCOCT00032477001;Parent=GSCOCG00032477001;Name=Cc11_g11180 | |
| 67189 chr11 manual_curation polypeptide 28524488 28530368 . - . ID=GSCOCP00032477001;Dbxref=InterPro:IPR000764,InterPro:IPR006083,InterPro:IPR008172,PANTHER:PTHR10285:SF6,PFAM:PF00485,PFAM:PF01928,PRINTS:PR00988,SwissProt:Q54R62,SwissProt:Q9GNF0,SwissProt:Q9RXZ5,TAIR:AT1G26190.1,TAIR:AT1G73980.1,TAIR:AT2G01460.1,TrEMBL:A7WPK7,TrEMBL:B9RLC2,TrEMBL:D7TAB5;Derives_from=GSCOCT00032477001;Name=Cc11_g11180;Ontology_term=CC_evidence_code:ISS,GO:0004016,GO:0005524,GO:0006171,GO:0008152,GO:0016301,CC_EC_number:2.7.1.48,PRODUCT:Putative Uridine-cytidine kinase C,CC_functional_completeness:modules,CC_gene:udkC,CC_gene:udkD,CC_gene:udk;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032477001~ Putative Uridine-cytidine kinase C~ udkC~ modules;original_location=join(2812298..2812634%2C2813080..2813194%2C2813571..2813766%2C2813852..2813965%2C2814147..2814320%2C2814880..2815074%2C2815869..2815991%2C2816068..2816189%2C2816860..2816983%2C2817120..2817392%2C2817960..2818178);owner=coffea | |
| 67190 chr11 manual_curation exon 28531887 28531977 . - . Parent=GSCOCT00032477001 | |
| 67191 chr11 manual_curation exon 28530032 28530390 . - . Parent=GSCOCT00032477001 | |
| 67192 chr11 manual_curation exon 28529472 28529586 . - . Parent=GSCOCT00032477001 | |
| 67193 chr11 manual_curation exon 28528900 28529095 . - . Parent=GSCOCT00032477001 | |
| 67194 chr11 manual_curation exon 28528701 28528814 . - . Parent=GSCOCT00032477001 | |
| 67195 chr11 manual_curation exon 28528346 28528519 . - . Parent=GSCOCT00032477001 | |
| 67196 chr11 manual_curation exon 28527592 28527786 . - . Parent=GSCOCT00032477001 | |
| 67197 chr11 manual_curation exon 28526675 28526797 . - . Parent=GSCOCT00032477001 | |
| 67198 chr11 manual_curation exon 28526477 28526598 . - . Parent=GSCOCT00032477001 | |
| 67199 chr11 manual_curation exon 28525683 28525806 . - . Parent=GSCOCT00032477001 | |
| 67200 chr11 manual_curation exon 28525274 28525546 . - . Parent=GSCOCT00032477001 | |
| 67201 chr11 manual_curation exon 28524142 28524706 . - . Parent=GSCOCT00032477001 | |
| 67202 chr11 manual_curation CDS 28530032 28530368 . - 0 Parent=GSCOCT00032477001 | |
| 67203 chr11 manual_curation CDS 28529472 28529586 . - 1 Parent=GSCOCT00032477001 | |
| 67204 chr11 manual_curation CDS 28528900 28529095 . - 2 Parent=GSCOCT00032477001 | |
| 67205 chr11 manual_curation CDS 28528701 28528814 . - 0 Parent=GSCOCT00032477001 | |
| 67206 chr11 manual_curation CDS 28528346 28528519 . - 0 Parent=GSCOCT00032477001 | |
| 67207 chr11 manual_curation CDS 28527592 28527786 . - 0 Parent=GSCOCT00032477001 | |
| 67208 chr11 manual_curation CDS 28526675 28526797 . - 0 Parent=GSCOCT00032477001 | |
| 67209 chr11 manual_curation CDS 28526477 28526598 . - 0 Parent=GSCOCT00032477001 | |
| 67210 chr11 manual_curation CDS 28525683 28525806 . - 2 Parent=GSCOCT00032477001 | |
| 67211 chr11 manual_curation CDS 28525274 28525546 . - 0 Parent=GSCOCT00032477001 | |
| 67212 chr11 manual_curation CDS 28524488 28524706 . - 0 Parent=GSCOCT00032477001 | |
| 67213 chr11 manual_curation gene 28537009 28539311 . - . ID=GSCOCG00032476001;Name=Cc11_g11190 | |
| 67214 chr11 manual_curation mRNA 28537009 28539311 . - . ID=GSCOCT00032476001;Parent=GSCOCG00032476001;Name=Cc11_g11190 | |
| 67215 chr11 manual_curation polypeptide 28537009 28539238 . - . ID=GSCOCP00032476001;Dbxref=InterPro:IPR000823,InterPro:IPR002016,InterPro:IPR010255,InterPro:IPR019793,InterPro:IPR019794,PFAM:PF00141,PRINTS:PR00458,PRINTS:PR00461,PROFILE:PS50873,PROSITE:PS00435,PROSITE:PS00436,SUPERFAMILY:SSF48113,SwissProt:A7NY33,SwissProt:O23237,SwissProt:Q96519,TAIR:AT1G68850.1,TAIR:AT2G18150.1,TAIR:AT4G36430.1,TrEMBL:B9HIT7,TrEMBL:B9HWR4,TrEMBL:F6HGH0;Derives_from=GSCOCT00032476001;Name=Cc11_g11190;Ontology_term=CC_evidence_code:ISS,GO:0004601,GO:0006979,GO:0020037,GO:0055114,CC_EC_number:1.11.1.7,PRODUCT:Peroxidase 11,CC_functional_completeness:complete,CC_gene:PER11,CC_gene:PER49,CC_gene:GSVIVT00023967001;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032476001~ Peroxidase 11~ PER11~ complete;original_location=join(2803428..2803646%2C2803811..2804002%2C2804358..2804520%2C2805233..2805657);owner=coffea | |
| 67216 chr11 manual_curation exon 28539020 28539311 . - . Parent=GSCOCT00032476001 | |
| 67217 chr11 manual_curation exon 28538664 28538855 . - . Parent=GSCOCT00032476001 | |
| 67218 chr11 manual_curation exon 28538146 28538308 . - . Parent=GSCOCT00032476001 | |
| 67219 chr11 manual_curation exon 28537009 28537433 . - . Parent=GSCOCT00032476001 | |
| 67220 chr11 manual_curation CDS 28539020 28539238 . - 0 Parent=GSCOCT00032476001 | |
| 67221 chr11 manual_curation CDS 28538664 28538855 . - 0 Parent=GSCOCT00032476001 | |
| 67222 chr11 manual_curation CDS 28538146 28538308 . - 0 Parent=GSCOCT00032476001 | |
| 67223 chr11 manual_curation CDS 28537009 28537433 . - 1 Parent=GSCOCT00032476001 | |
| 67224 chr11 manual_curation gene 28543784 28546770 . - . ID=GSCOCG00032475001;Name=Cc11_g11200 | |
| 67225 chr11 manual_curation mRNA 28543784 28546770 . - . ID=GSCOCT00032475001;Parent=GSCOCG00032475001;Name=Cc11_g11200 | |
| 67226 chr11 manual_curation polypeptide 28544035 28544826 . - . ID=GSCOCP00032475001;Dbxref=TAIR:AT3G25545.1,TrEMBL:B9RLC4,TrEMBL:D7LQR2,TrEMBL:F6HGH1;Derives_from=GSCOCT00032475001;Name=Cc11_g11200;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032475001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B Has 38 Blast hits to 38 proteins in 14 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 38%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=2797840..2798631;owner=coffea | |
| 67227 chr11 manual_curation exon 28546674 28546770 . - . Parent=GSCOCT00032475001 | |
| 67228 chr11 manual_curation exon 28543784 28544848 . - . Parent=GSCOCT00032475001 | |
| 67229 chr11 manual_curation CDS 28544035 28544826 . - 0 Parent=GSCOCT00032475001 | |
| 67230 chr11 manual_curation gene 28548757 28554673 . - . ID=GSCOCG00032474001;Name=Cc11_g11210 | |
| 67231 chr11 manual_curation mRNA 28548757 28554673 . - . ID=GSCOCT00032474001;Parent=GSCOCG00032474001;Name=Cc11_g11210 | |
| 67232 chr11 manual_curation polypeptide 28549448 28554407 . - . ID=GSCOCP00032474001;Dbxref=InterPro:IPR006634,InterPro:IPR016439,PFAM:PF03798,PIR:PIRSF005225,PROFILE:PS50922,SMART:SM00724,SwissProt:Q6EUN0,SwissProt:Q6NQI8,SwissProt:Q8W4Y5,TAIR:AT1G13580.2,TAIR:AT1G26200.1,TAIR:AT3G25540.1,TrEMBL:C0Z2Q8,TrEMBL:D7KQH1,TrEMBL:I1MMA9;Derives_from=GSCOCT00032474001;Name=Cc11_g11210;Ontology_term=CC_evidence_code:ISS,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:ASC1-like protein,CC_functional_completeness:complete,CC_gene:At1g13580,CC_gene:Os02g0581300;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032474001~ ASC1-like protein~ At1g13580~ complete;original_location=join(2788259..2788369%2C2789947..2790176%2C2790474..2790629%2C2790884..2791069%2C2792099..2792283%2C2793187..2793218);owner=coffea | |
| 67233 chr11 manual_curation exon 28554297 28554673 . - . Parent=GSCOCT00032474001 | |
| 67234 chr11 manual_curation exon 28552490 28552719 . - . Parent=GSCOCT00032474001 | |
| 67235 chr11 manual_curation exon 28552037 28552192 . - . Parent=GSCOCT00032474001 | |
| 67236 chr11 manual_curation exon 28551597 28551782 . - . Parent=GSCOCT00032474001 | |
| 67237 chr11 manual_curation exon 28550383 28550567 . - . Parent=GSCOCT00032474001 | |
| 67238 chr11 manual_curation exon 28548757 28549479 . - . Parent=GSCOCT00032474001 | |
| 67239 chr11 manual_curation CDS 28554297 28554407 . - 0 Parent=GSCOCT00032474001 | |
| 67240 chr11 manual_curation CDS 28552490 28552719 . - 0 Parent=GSCOCT00032474001 | |
| 67241 chr11 manual_curation CDS 28552037 28552192 . - 2 Parent=GSCOCT00032474001 | |
| 67242 chr11 manual_curation CDS 28551597 28551782 . - 2 Parent=GSCOCT00032474001 | |
| 67243 chr11 manual_curation CDS 28550383 28550567 . - 2 Parent=GSCOCT00032474001 | |
| 67244 chr11 manual_curation CDS 28549448 28549479 . - 1 Parent=GSCOCT00032474001 | |
| 67245 chr11 manual_curation gene 28557232 28557947 . - . ID=GSCOCG00032473001;Name=Cc11_g11220 | |
| 67246 chr11 manual_curation mRNA 28557232 28557947 . - . ID=GSCOCT00032473001;Parent=GSCOCG00032473001;Name=Cc11_g11220 | |
| 67247 chr11 manual_curation polypeptide 28557280 28557840 . - . ID=GSCOCP00032473001;Derives_from=GSCOCT00032473001;Name=Cc11_g11220;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032473001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(2784826..2784917%2C2785344..2785386);owner=coffea | |
| 67248 chr11 manual_curation exon 28557749 28557947 . - . Parent=GSCOCT00032473001 | |
| 67249 chr11 manual_curation exon 28557232 28557322 . - . Parent=GSCOCT00032473001 | |
| 67250 chr11 manual_curation CDS 28557749 28557840 . - 0 Parent=GSCOCT00032473001 | |
| 67251 chr11 manual_curation CDS 28557280 28557322 . - 2 Parent=GSCOCT00032473001 | |
| 67252 chr11 manual_curation gene 28558028 28558483 . + . ID=GSCOCG00032472001;Name=Cc11_g11230 | |
| 67253 chr11 manual_curation mRNA 28558028 28558483 . + . ID=GSCOCT00032472001;Parent=GSCOCG00032472001;Name=Cc11_g11230 | |
| 67254 chr11 manual_curation polypeptide 28558028 28558483 . + . ID=GSCOCP00032472001;Dbxref=TrEMBL:A5ASM7;Derives_from=GSCOCT00032472001;Name=Cc11_g11230;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032472001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=complement(2784183..2784638);owner=coffea | |
| 67255 chr11 manual_curation exon 28558028 28558483 . + . Parent=GSCOCT00032472001 | |
| 67256 chr11 manual_curation CDS 28558028 28558483 . + 0 Parent=GSCOCT00032472001 | |
| 67257 chr11 manual_curation gene 28559680 28562724 . - . ID=GSCOCG00032471001;Name=Cc11_g11240 | |
| 67258 chr11 manual_curation mRNA 28559680 28562724 . - . ID=GSCOCT00032471001;Parent=GSCOCG00032471001;Name=Cc11_g11240 | |
| 67259 chr11 manual_curation polypeptide 28559956 28561413 . - . ID=GSCOCP00032471001;Dbxref=GENE3D:G3DSA:1.10.1040.10,GENE3D:G3DSA:1.20.5.320,GENE3D:G3DSA:3.40.50.720,InterPro:IPR006113,InterPro:IPR006114,InterPro:IPR006115,InterPro:IPR006183,InterPro:IPR008927,InterPro:IPR012284,InterPro:IPR013328,InterPro:IPR016040,PFAM:PF00393,PFAM:PF03446,PRINTS:PR00076,SUPERFAMILY:SSF48179,SwissProt:P21577,SwissProt:P52208,SwissProt:P80859,TAIR:AT1G64190.1,TAIR:AT3G02360.2,TAIR:AT5G41670.1,TIGRFAMs:TIGR00873,TrEMBL:B9N1W3,TrEMBL:F6HGH4,TrEMBL:I1KWM7;Derives_from=GSCOCT00032471001;Name=Cc11_g11240;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004616,GO:0005488,GO:0006098,GO:0008152,GO:0016491,GO:0050661,GO:0050662,GO:0055114,CC_EC_number:1.1.1.44,CC_EC_number:1.1.1.44,PRODUCT:6-phosphogluconate dehydrogenase%2C decarboxylating,CC_functional_completeness:complete,CC_gene:gnd,CC_gene:yqjI;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032471001~ 6-phosphogluconate dehydrogenase%2C decarboxylating~ gnd~ complete;original_location=2781253..2782710;owner=coffea | |
| 67260 chr11 manual_curation exon 28559680 28562724 . - . Parent=GSCOCT00032471001 | |
| 67261 chr11 manual_curation CDS 28559956 28561413 . - 0 Parent=GSCOCT00032471001 | |
| 67262 chr11 manual_curation gene 28565583 28566167 . + . ID=GSCOCG00032470001;Name=Cc11_g11250 | |
| 67263 chr11 manual_curation mRNA 28565583 28566167 . + . ID=GSCOCT00032470001;Parent=GSCOCG00032470001;Name=Cc11_g11250 | |
| 67264 chr11 manual_curation polypeptide 28565583 28566167 . + . ID=GSCOCP00032470001;Dbxref=GENE3D:G3DSA:3.40.630.30,InterPro:IPR000182,InterPro:IPR016181,InterPro:IPR022610,PFAM:PF00583,PROFILE:PS51186,SUPERFAMILY:SSF55729,SwissProt:P51192,SwissProt:Q1XDU5,SwissProt:Q5KQI6,TAIR:AT1G26220.1,TAIR:AT1G32070.2,TrEMBL:A5BM20,TrEMBL:B9HIW2,TrEMBL:B9RLC7;Derives_from=GSCOCT00032470001;Name=Cc11_g11250;Ontology_term=CC_evidence_code:ISS,GO:0008080,GO:0008152,CC_EC_number:missing_EC_number,PRODUCT:Acyl-CoA N-acyltransferases (NAT) superfamily protein,CC_functional_completeness:complete,CC_gene:ycf52,CC_gene:NSI;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032470001~ Acyl-CoA N-acyltransferases (NAT) superfamily protein~ ycf52~ complete;original_location=complement(2776499..2777083);owner=coffea | |
| 67265 chr11 manual_curation exon 28565583 28566167 . + . Parent=GSCOCT00032470001 | |
| 67266 chr11 manual_curation CDS 28565583 28566167 . + 0 Parent=GSCOCT00032470001 | |
| 67267 chr11 manual_curation gene 28567645 28574495 . - . ID=GSCOCG00032469001;Name=Cc11_g11260 | |
| 67268 chr11 manual_curation mRNA 28567645 28574495 . - . ID=GSCOCT00032469001;Parent=GSCOCG00032469001;Name=Cc11_g11260 | |
| 67269 chr11 manual_curation polypeptide 28567645 28573291 . - . ID=GSCOCP00032469001;Derives_from=GSCOCT00032469001;Name=Cc11_g11260;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032469001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(2769375..2769461%2C2769966..2770286%2C2771381..2771463%2C2773965..2775021);owner=coffea | |
| 67270 chr11 manual_curation exon 28573205 28574495 . - . Parent=GSCOCT00032469001 | |
| 67271 chr11 manual_curation exon 28572380 28572700 . - . Parent=GSCOCT00032469001 | |
| 67272 chr11 manual_curation exon 28571203 28571285 . - . Parent=GSCOCT00032469001 | |
| 67273 chr11 manual_curation exon 28567645 28568701 . - . Parent=GSCOCT00032469001 | |
| 67274 chr11 manual_curation CDS 28573205 28573291 . - 0 Parent=GSCOCT00032469001 | |
| 67275 chr11 manual_curation CDS 28572380 28572700 . - 0 Parent=GSCOCT00032469001 | |
| 67276 chr11 manual_curation CDS 28571203 28571285 . - 0 Parent=GSCOCT00032469001 | |
| 67277 chr11 manual_curation CDS 28567645 28568701 . - 2 Parent=GSCOCT00032469001 | |
| 67278 chr11 manual_curation gene 28574724 28576557 . - . ID=GSCOCG00032468001;Name=Cc11_g11270 | |
| 67279 chr11 manual_curation mRNA 28574724 28576557 . - . ID=GSCOCT00032468001;Parent=GSCOCG00032468001;Name=Cc11_g11270 | |
| 67280 chr11 manual_curation polypeptide 28574724 28576557 . - . ID=GSCOCP00032468001;Dbxref=InterPro:IPR004853,PFAM:PF03151,SwissProt:P29463,SwissProt:P49131,SwissProt:P49132,TAIR:AT1G61800.1,TAIR:AT5G46110.4,TAIR:AT5G54800.1,TrEMBL:B9HIE0,TrEMBL:B9REF2,TrEMBL:D7T9V7;Derives_from=GSCOCT00032468001;Name=Cc11_g11270;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:TPT;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032468001~ Hypothetical protein~ TPT~ missing_functional_completeness;original_location=join(2766109..2766219%2C2766387..2766568%2C2766699..2766736%2C2766810..2766943%2C2767652..2767729%2C2767829..2767942);owner=coffea | |
| 67281 chr11 manual_curation exon 28576447 28576557 . - . Parent=GSCOCT00032468001 | |
| 67282 chr11 manual_curation exon 28576098 28576279 . - . Parent=GSCOCT00032468001 | |
| 67283 chr11 manual_curation exon 28575930 28575967 . - . Parent=GSCOCT00032468001 | |
| 67284 chr11 manual_curation exon 28575723 28575856 . - . Parent=GSCOCT00032468001 | |
| 67285 chr11 manual_curation exon 28574937 28575014 . - . Parent=GSCOCT00032468001 | |
| 67286 chr11 manual_curation exon 28574724 28574837 . - . Parent=GSCOCT00032468001 | |
| 67287 chr11 manual_curation CDS 28576447 28576557 . - 0 Parent=GSCOCT00032468001 | |
| 67288 chr11 manual_curation CDS 28576098 28576279 . - 0 Parent=GSCOCT00032468001 | |
| 67289 chr11 manual_curation CDS 28575930 28575967 . - 2 Parent=GSCOCT00032468001 | |
| 67290 chr11 manual_curation CDS 28575723 28575856 . - 1 Parent=GSCOCT00032468001 | |
| 67291 chr11 manual_curation CDS 28574937 28575014 . - 0 Parent=GSCOCT00032468001 | |
| 67292 chr11 manual_curation CDS 28574724 28574837 . - 0 Parent=GSCOCT00032468001 | |
| 67293 chr11 manual_curation gene 28584445 28589458 . - . ID=GSCOCG00032466001;Name=Cc11_g11280 | |
| 67294 chr11 manual_curation mRNA 28584445 28589458 . - . ID=GSCOCT00032466001;Parent=GSCOCG00032466001;Name=Cc11_g11280 | |
| 67295 chr11 manual_curation polypeptide 28584859 28589336 . - . ID=GSCOCP00032466001;Dbxref=InterPro:IPR001844,InterPro:IPR002423,InterPro:IPR018370,PANTHER:PTHR11353,PFAM:PF00118,PRINTS:PR00298,PROSITE:PS00296,SUPERFAMILY:SSF48592,SwissProt:P08927,SwissProt:P21240,SwissProt:Q9C667,TAIR:AT1G26230.1,TAIR:AT1G55490.1,TAIR:AT5G56500.1,TIGRFAMs:TIGR02348,TrEMBL:B9RLC9,TrEMBL:F6HGG3,TrEMBL:I1J687;Derives_from=GSCOCT00032466001;Name=Cc11_g11280;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0005524,GO:0005737,GO:0006457,GO:0042026,GO:0044267,CC_EC_number:missing_EC_number,PRODUCT:Chaperonin 60 subunit beta 4%2C chloroplastic,CC_functional_completeness:complete,CC_gene:CPN60B4,CC_gene:CPN60B1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032466001~ Chaperonin 60 subunit beta 4%2C chloroplastic~ CPN60B4~ complete;original_location=join(2753330..2753383%2C2753473..2753598%2C2754319..2754456%2C2754676..2754771%2C2754920..2755162%2C2755236..2755470%2C2755855..2756024%2C2756511..2756588%2C2756681..2756752%2C2756827..2756931%2C2757095..2757187%2C2757321..2757413%2C2757507..2757633%2C2757773..2757807);owner=coffea | |
| 67296 chr11 manual_curation exon 28589283 28589458 . - . Parent=GSCOCT00032466001 | |
| 67297 chr11 manual_curation exon 28589068 28589193 . - . Parent=GSCOCT00032466001 | |
| 67298 chr11 manual_curation exon 28588210 28588347 . - . Parent=GSCOCT00032466001 | |
| 67299 chr11 manual_curation exon 28587895 28587990 . - . Parent=GSCOCT00032466001 | |
| 67300 chr11 manual_curation exon 28587504 28587746 . - . Parent=GSCOCT00032466001 | |
| 67301 chr11 manual_curation exon 28587196 28587430 . - . Parent=GSCOCT00032466001 | |
| 67302 chr11 manual_curation exon 28586642 28586811 . - . Parent=GSCOCT00032466001 | |
| 67303 chr11 manual_curation exon 28586078 28586155 . - . Parent=GSCOCT00032466001 | |
| 67304 chr11 manual_curation exon 28585914 28585985 . - . Parent=GSCOCT00032466001 | |
| 67305 chr11 manual_curation exon 28585735 28585839 . - . Parent=GSCOCT00032466001 | |
| 67306 chr11 manual_curation exon 28585479 28585571 . - . Parent=GSCOCT00032466001 | |
| 67307 chr11 manual_curation exon 28585253 28585345 . - . Parent=GSCOCT00032466001 | |
| 67308 chr11 manual_curation exon 28585033 28585159 . - . Parent=GSCOCT00032466001 | |
| 67309 chr11 manual_curation exon 28584445 28584893 . - . Parent=GSCOCT00032466001 | |
| 67310 chr11 manual_curation CDS 28589283 28589336 . - 0 Parent=GSCOCT00032466001 | |
| 67311 chr11 manual_curation CDS 28589068 28589193 . - 0 Parent=GSCOCT00032466001 | |
| 67312 chr11 manual_curation CDS 28588210 28588347 . - 0 Parent=GSCOCT00032466001 | |
| 67313 chr11 manual_curation CDS 28587895 28587990 . - 0 Parent=GSCOCT00032466001 | |
| 67314 chr11 manual_curation CDS 28587504 28587746 . - 0 Parent=GSCOCT00032466001 | |
| 67315 chr11 manual_curation CDS 28587196 28587430 . - 0 Parent=GSCOCT00032466001 | |
| 67316 chr11 manual_curation CDS 28586642 28586811 . - 1 Parent=GSCOCT00032466001 | |
| 67317 chr11 manual_curation CDS 28586078 28586155 . - 0 Parent=GSCOCT00032466001 | |
| 67318 chr11 manual_curation CDS 28585914 28585985 . - 0 Parent=GSCOCT00032466001 | |
| 67319 chr11 manual_curation CDS 28585735 28585839 . - 0 Parent=GSCOCT00032466001 | |
| 67320 chr11 manual_curation CDS 28585479 28585571 . - 0 Parent=GSCOCT00032466001 | |
| 67321 chr11 manual_curation CDS 28585253 28585345 . - 0 Parent=GSCOCT00032466001 | |
| 67322 chr11 manual_curation CDS 28585033 28585159 . - 0 Parent=GSCOCT00032466001 | |
| 67323 chr11 manual_curation CDS 28584859 28584893 . - 1 Parent=GSCOCT00032466001 | |
| 67324 chr11 manual_curation gene 28592459 28593336 . - . ID=GSCOCG00032465001;Name=Cc11_g11290 | |
| 67325 chr11 manual_curation mRNA 28592459 28593336 . - . ID=GSCOCT00032465001;Parent=GSCOCG00032465001;Name=Cc11_g11290 | |
| 67326 chr11 manual_curation polypeptide 28592679 28593269 . - . ID=GSCOCP00032465001;Dbxref=InterPro:IPR004827,InterPro:IPR011616,PFAM:PF00170,PROFILE:PS50217,PROSITE:PS00036,SMART:SM00338,TAIR:AT1G13600.1,TAIR:AT2G04038.1,TAIR:AT3G30530.1,TrEMBL:A5BFE4,TrEMBL:B9HIW1,TrEMBL:D7TAA5;Derives_from=GSCOCT00032465001;Name=Cc11_g11290;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0043565,GO:0046983,CC_EC_number:missing_EC_number,PRODUCT:basic leucine-zipper 42,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032465001~ basic leucine-zipper 42~ unknown_gene~ modules;original_location=2749397..2749987;owner=coffea | |
| 67327 chr11 manual_curation exon 28592459 28593336 . - . Parent=GSCOCT00032465001 | |
| 67328 chr11 manual_curation CDS 28592679 28593269 . - 0 Parent=GSCOCT00032465001 | |
| 67329 chr11 manual_curation gene 28610208 28625867 . + . ID=GSCOCG00032463001;Name=Cc11_g11300 | |
| 67330 chr11 manual_curation mRNA 28610208 28625867 . + . ID=GSCOCT00032463001;Parent=GSCOCG00032463001;Name=Cc11_g11300 | |
| 67331 chr11 manual_curation polypeptide 28610208 28625348 . + . ID=GSCOCP00032463001;Dbxref=HAMAP:MF_01659,InterPro:IPR000073,InterPro:IPR004433,InterPro:IPR011766,InterPro:IPR012001,InterPro:IPR013342,InterPro:IPR018110,InterPro:IPR022485,PFAM:PF00561,PFAM:PF01188,PFAM:PF02775,PFAM:PF02776,PROSITE:PS00909,SwissProt:A1BI74,SwissProt:B4S4J4,SwissProt:Q15KI9,TAIR:AT1G68890.1,TIGRFAMs:TIGR00173,TIGRFAMs:TIGR03695,TrEMBL:B9RLD6,TrEMBL:D7KWW2,TrEMBL:F7VJK0;Derives_from=GSCOCT00032463001;Name=Cc11_g11300;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0009063,GO:0009234,GO:0030976,GO:0070204,CC_EC_number:4.1.1.71,PRODUCT:Protein PHYLLO%2C chloroplastic,CC_functional_completeness:complete,CC_gene:PHYLLO,CC_gene:menD;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032463001~ Protein PHYLLO%2C chloroplastic~ PHYLLO~ complete;original_location=complement(join(2732252..2732458%2C2731574..2731788%2C2730795..2730915%2C2730572..2730688%2C2729965..2730063%2C2729541..2729600%2C2729317..2729388%2C2728673..2728783%2C2728408..2728602%2C2727867..2727965%2C2726969..2727535%2C2726285..2726509%2C2724957..2725253%2C2723878..2723945%2C2723550..2723708%2C2723026..2723151%2C2722848..2722948%2C2722605..2722735%2C2721713..2721868%2C2721348..2721584%2C2720998..2721165%2C2720419..2720562%2C2719453..2719914%2C2718777..2719064%2C2718520..2718677%2C2718304..2718411%2C2717318..2717570));owner=coffea | |
| 67332 chr11 manual_curation exon 28625096 28625867 . + . Parent=GSCOCT00032463001 | |
| 67333 chr11 manual_curation exon 28624255 28624362 . + . Parent=GSCOCT00032463001 | |
| 67334 chr11 manual_curation exon 28623989 28624146 . + . Parent=GSCOCT00032463001 | |
| 67335 chr11 manual_curation exon 28623602 28623889 . + . Parent=GSCOCT00032463001 | |
| 67336 chr11 manual_curation exon 28622752 28623213 . + . Parent=GSCOCT00032463001 | |
| 67337 chr11 manual_curation exon 28622104 28622247 . + . Parent=GSCOCT00032463001 | |
| 67338 chr11 manual_curation exon 28621501 28621668 . + . Parent=GSCOCT00032463001 | |
| 67339 chr11 manual_curation exon 28621082 28621318 . + . Parent=GSCOCT00032463001 | |
| 67340 chr11 manual_curation exon 28620798 28620953 . + . Parent=GSCOCT00032463001 | |
| 67341 chr11 manual_curation exon 28619931 28620061 . + . Parent=GSCOCT00032463001 | |
| 67342 chr11 manual_curation exon 28619718 28619818 . + . Parent=GSCOCT00032463001 | |
| 67343 chr11 manual_curation exon 28619515 28619640 . + . Parent=GSCOCT00032463001 | |
| 67344 chr11 manual_curation exon 28618958 28619116 . + . Parent=GSCOCT00032463001 | |
| 67345 chr11 manual_curation exon 28618721 28618788 . + . Parent=GSCOCT00032463001 | |
| 67346 chr11 manual_curation exon 28617413 28617709 . + . Parent=GSCOCT00032463001 | |
| 67347 chr11 manual_curation exon 28616157 28616381 . + . Parent=GSCOCT00032463001 | |
| 67348 chr11 manual_curation exon 28615131 28615697 . + . Parent=GSCOCT00032463001 | |
| 67349 chr11 manual_curation exon 28614701 28614799 . + . Parent=GSCOCT00032463001 | |
| 67350 chr11 manual_curation exon 28614064 28614258 . + . Parent=GSCOCT00032463001 | |
| 67351 chr11 manual_curation exon 28613883 28613993 . + . Parent=GSCOCT00032463001 | |
| 67352 chr11 manual_curation exon 28613278 28613349 . + . Parent=GSCOCT00032463001 | |
| 67353 chr11 manual_curation exon 28613066 28613125 . + . Parent=GSCOCT00032463001 | |
| 67354 chr11 manual_curation exon 28612603 28612701 . + . Parent=GSCOCT00032463001 | |
| 67355 chr11 manual_curation exon 28611978 28612094 . + . Parent=GSCOCT00032463001 | |
| 67356 chr11 manual_curation exon 28611751 28611871 . + . Parent=GSCOCT00032463001 | |
| 67357 chr11 manual_curation exon 28610878 28611092 . + . Parent=GSCOCT00032463001 | |
| 67358 chr11 manual_curation exon 28610208 28610414 . + . Parent=GSCOCT00032463001 | |
| 67359 chr11 manual_curation CDS 28625096 28625348 . + 2 Parent=GSCOCT00032463001 | |
| 67360 chr11 manual_curation CDS 28624255 28624362 . + 2 Parent=GSCOCT00032463001 | |
| 67361 chr11 manual_curation CDS 28623989 28624146 . + 0 Parent=GSCOCT00032463001 | |
| 67362 chr11 manual_curation CDS 28623602 28623889 . + 0 Parent=GSCOCT00032463001 | |
| 67363 chr11 manual_curation CDS 28622752 28623213 . + 0 Parent=GSCOCT00032463001 | |
| 67364 chr11 manual_curation CDS 28622104 28622247 . + 0 Parent=GSCOCT00032463001 | |
| 67365 chr11 manual_curation CDS 28621501 28621668 . + 0 Parent=GSCOCT00032463001 | |
| 67366 chr11 manual_curation CDS 28621082 28621318 . + 0 Parent=GSCOCT00032463001 | |
| 67367 chr11 manual_curation CDS 28620798 28620953 . + 0 Parent=GSCOCT00032463001 | |
| 67368 chr11 manual_curation CDS 28619931 28620061 . + 1 Parent=GSCOCT00032463001 | |
| 67369 chr11 manual_curation CDS 28619718 28619818 . + 2 Parent=GSCOCT00032463001 | |
| 67370 chr11 manual_curation CDS 28619515 28619640 . + 2 Parent=GSCOCT00032463001 | |
| 67371 chr11 manual_curation CDS 28618958 28619116 . + 2 Parent=GSCOCT00032463001 | |
| 67372 chr11 manual_curation CDS 28618721 28618788 . + 0 Parent=GSCOCT00032463001 | |
| 67373 chr11 manual_curation CDS 28617413 28617709 . + 0 Parent=GSCOCT00032463001 | |
| 67374 chr11 manual_curation CDS 28616157 28616381 . + 0 Parent=GSCOCT00032463001 | |
| 67375 chr11 manual_curation CDS 28615131 28615697 . + 0 Parent=GSCOCT00032463001 | |
| 67376 chr11 manual_curation CDS 28614701 28614799 . + 0 Parent=GSCOCT00032463001 | |
| 67377 chr11 manual_curation CDS 28614064 28614258 . + 0 Parent=GSCOCT00032463001 | |
| 67378 chr11 manual_curation CDS 28613883 28613993 . + 0 Parent=GSCOCT00032463001 | |
| 67379 chr11 manual_curation CDS 28613278 28613349 . + 0 Parent=GSCOCT00032463001 | |
| 67380 chr11 manual_curation CDS 28613066 28613125 . + 0 Parent=GSCOCT00032463001 | |
| 67381 chr11 manual_curation CDS 28612603 28612701 . + 0 Parent=GSCOCT00032463001 | |
| 67382 chr11 manual_curation CDS 28611978 28612094 . + 0 Parent=GSCOCT00032463001 | |
| 67383 chr11 manual_curation CDS 28611751 28611871 . + 2 Parent=GSCOCT00032463001 | |
| 67384 chr11 manual_curation CDS 28610878 28611092 . + 0 Parent=GSCOCT00032463001 | |
| 67385 chr11 manual_curation CDS 28610208 28610414 . + 0 Parent=GSCOCT00032463001 | |
| 67386 chr11 manual_curation gene 28632012 28633247 . + . ID=GSCOCG00032462001;Name=Cc11_g11310 | |
| 67387 chr11 manual_curation mRNA 28632012 28633247 . + . ID=GSCOCT00032462001;Parent=GSCOCG00032462001;Name=Cc11_g11310 | |
| 67388 chr11 manual_curation polypeptide 28632012 28633247 . + . ID=GSCOCP00032462001;Derives_from=GSCOCT00032462001;Name=Cc11_g11310;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032462001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(2710633..2710654%2C2709639..2709756%2C2709419..2709539));owner=coffea | |
| 67389 chr11 manual_curation exon 28633127 28633247 . + . Parent=GSCOCT00032462001 | |
| 67390 chr11 manual_curation exon 28632910 28633027 . + . Parent=GSCOCT00032462001 | |
| 67391 chr11 manual_curation exon 28632012 28632033 . + . Parent=GSCOCT00032462001 | |
| 67392 chr11 manual_curation CDS 28633127 28633247 . + 2 Parent=GSCOCT00032462001 | |
| 67393 chr11 manual_curation CDS 28632910 28633027 . + 1 Parent=GSCOCT00032462001 | |
| 67394 chr11 manual_curation CDS 28632012 28632033 . + 0 Parent=GSCOCT00032462001 | |
| 67395 chr11 manual_curation gene 28634512 28639883 . + . ID=GSCOCG00032461001;Name=Cc11_g11320 | |
| 67396 chr11 manual_curation mRNA 28634512 28639883 . + . ID=GSCOCT00032461001;Parent=GSCOCG00032461001;Name=Cc11_g11320 | |
| 67397 chr11 manual_curation polypeptide 28634512 28639883 . + . ID=GSCOCP00032461001;Dbxref=InterPro:IPR004433,InterPro:IPR012001,PFAM:PF02776,SwissProt:B4S4J4,SwissProt:Q15KI9,SwissProt:Q1AS21,TAIR:AT1G68890.1,TAIR:AT3G48560.1,TIGRFAMs:TIGR00173,TrEMBL:B9HWS3,TrEMBL:B9RLD6,TrEMBL:I1MJR8;Derives_from=GSCOCT00032461001;Name=Cc11_g11320;Ontology_term=CC_evidence_code:ISS,GO:0009234,GO:0030976,GO:0070204,CC_EC_number:4.1.1.71,PRODUCT:Protein PHYLLO%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:PHYLLO,CC_gene:menD;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032461001~ Protein PHYLLO%2C chloroplastic~ PHYLLO~ fragment;original_location=complement(join(2708038..2708154%2C2707308..2707412%2C2707044..2707238%2C2706481..2706579%2C2704856..2705422%2C2703947..2704171%2C2702783..2703160));owner=coffea | |
| 67398 chr11 manual_curation exon 28639506 28639883 . + . Parent=GSCOCT00032461001 | |
| 67399 chr11 manual_curation exon 28638495 28638719 . + . Parent=GSCOCT00032461001 | |
| 67400 chr11 manual_curation exon 28637244 28637810 . + . Parent=GSCOCT00032461001 | |
| 67401 chr11 manual_curation exon 28636087 28636185 . + . Parent=GSCOCT00032461001 | |
| 67402 chr11 manual_curation exon 28635428 28635622 . + . Parent=GSCOCT00032461001 | |
| 67403 chr11 manual_curation exon 28635254 28635358 . + . Parent=GSCOCT00032461001 | |
| 67404 chr11 manual_curation exon 28634512 28634628 . + . Parent=GSCOCT00032461001 | |
| 67405 chr11 manual_curation CDS 28639506 28639883 . + 0 Parent=GSCOCT00032461001 | |
| 67406 chr11 manual_curation CDS 28638495 28638719 . + 0 Parent=GSCOCT00032461001 | |
| 67407 chr11 manual_curation CDS 28637244 28637810 . + 0 Parent=GSCOCT00032461001 | |
| 67408 chr11 manual_curation CDS 28636087 28636185 . + 0 Parent=GSCOCT00032461001 | |
| 67409 chr11 manual_curation CDS 28635428 28635622 . + 0 Parent=GSCOCT00032461001 | |
| 67410 chr11 manual_curation CDS 28635254 28635358 . + 0 Parent=GSCOCT00032461001 | |
| 67411 chr11 manual_curation CDS 28634512 28634628 . + 0 Parent=GSCOCT00032461001 | |
| 67412 chr11 manual_curation gene 28640293 28648324 . + . ID=GSCOCG00032460001;Name=Cc11_g11330 | |
| 67413 chr11 manual_curation mRNA 28640293 28648324 . + . ID=GSCOCT00032460001;Parent=GSCOCG00032460001;Name=Cc11_g11330 | |
| 67414 chr11 manual_curation polypeptide 28640293 28648324 . + . ID=GSCOCP00032460001;Dbxref=InterPro:IPR000073,InterPro:IPR011766,InterPro:IPR013342,InterPro:IPR018110,PFAM:PF00561,PFAM:PF01188,PFAM:PF02775,PROSITE:PS00909,SwissProt:A8GGZ0,SwissProt:P23974,SwissProt:Q15KI9,TAIR:AT1G68890.1,TrEMBL:B9RLD6,TrEMBL:D7KWW2,TrEMBL:F6HGF8;Derives_from=GSCOCT00032460001;Name=Cc11_g11330;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0009063,GO:0030976,CC_EC_number:4.1.1.71,PRODUCT:Protein PHYLLO%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:PHYLLO,CC_gene:ytxM,CC_gene:menH;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032460001~ Protein PHYLLO%2C chloroplastic~ PHYLLO~ fragment;original_location=complement(join(2702353..2702373%2C2702184..2702251%2C2701527..2701688%2C2700878..2701003%2C2700655..2700786%2C2700451..2700568%2C2698893..2699048%2C2698453..2698689%2C2698168..2698335%2C2697684..2697827%2C2696753..2697214%2C2695762..2696061%2C2695521..2695678%2C2695308..2695415%2C2694342..2694654));owner=coffea | |
| 67415 chr11 manual_curation exon 28648012 28648324 . + . Parent=GSCOCT00032460001 | |
| 67416 chr11 manual_curation exon 28647251 28647358 . + . Parent=GSCOCT00032460001 | |
| 67417 chr11 manual_curation exon 28646988 28647145 . + . Parent=GSCOCT00032460001 | |
| 67418 chr11 manual_curation exon 28646605 28646904 . + . Parent=GSCOCT00032460001 | |
| 67419 chr11 manual_curation exon 28645452 28645913 . + . Parent=GSCOCT00032460001 | |
| 67420 chr11 manual_curation exon 28644839 28644982 . + . Parent=GSCOCT00032460001 | |
| 67421 chr11 manual_curation exon 28644331 28644498 . + . Parent=GSCOCT00032460001 | |
| 67422 chr11 manual_curation exon 28643977 28644213 . + . Parent=GSCOCT00032460001 | |
| 67423 chr11 manual_curation exon 28643618 28643773 . + . Parent=GSCOCT00032460001 | |
| 67424 chr11 manual_curation exon 28642098 28642215 . + . Parent=GSCOCT00032460001 | |
| 67425 chr11 manual_curation exon 28641880 28642011 . + . Parent=GSCOCT00032460001 | |
| 67426 chr11 manual_curation exon 28641663 28641788 . + . Parent=GSCOCT00032460001 | |
| 67427 chr11 manual_curation exon 28640978 28641139 . + . Parent=GSCOCT00032460001 | |
| 67428 chr11 manual_curation exon 28640415 28640482 . + . Parent=GSCOCT00032460001 | |
| 67429 chr11 manual_curation exon 28640293 28640313 . + . Parent=GSCOCT00032460001 | |
| 67430 chr11 manual_curation CDS 28648012 28648324 . + 2 Parent=GSCOCT00032460001 | |
| 67431 chr11 manual_curation CDS 28647251 28647358 . + 2 Parent=GSCOCT00032460001 | |
| 67432 chr11 manual_curation CDS 28646988 28647145 . + 0 Parent=GSCOCT00032460001 | |
| 67433 chr11 manual_curation CDS 28646605 28646904 . + 0 Parent=GSCOCT00032460001 | |
| 67434 chr11 manual_curation CDS 28645452 28645913 . + 0 Parent=GSCOCT00032460001 | |
| 67435 chr11 manual_curation CDS 28644839 28644982 . + 0 Parent=GSCOCT00032460001 | |
| 67436 chr11 manual_curation CDS 28644331 28644498 . + 0 Parent=GSCOCT00032460001 | |
| 67437 chr11 manual_curation CDS 28643977 28644213 . + 0 Parent=GSCOCT00032460001 | |
| 67438 chr11 manual_curation CDS 28643618 28643773 . + 0 Parent=GSCOCT00032460001 | |
| 67439 chr11 manual_curation CDS 28642098 28642215 . + 2 Parent=GSCOCT00032460001 | |
| 67440 chr11 manual_curation CDS 28641880 28642011 . + 2 Parent=GSCOCT00032460001 | |
| 67441 chr11 manual_curation CDS 28641663 28641788 . + 2 Parent=GSCOCT00032460001 | |
| 67442 chr11 manual_curation CDS 28640978 28641139 . + 2 Parent=GSCOCT00032460001 | |
| 67443 chr11 manual_curation CDS 28640415 28640482 . + 0 Parent=GSCOCT00032460001 | |
| 67444 chr11 manual_curation CDS 28640293 28640313 . + 0 Parent=GSCOCT00032460001 | |
| 67445 chr11 manual_curation gene 28651163 28653732 . + . ID=GSCOCG00032458001;Name=Cc11_g11340 | |
| 67446 chr11 manual_curation mRNA 28651163 28653732 . + . ID=GSCOCT00032458001;Parent=GSCOCG00032458001;Name=Cc11_g11340 | |
| 67447 chr11 manual_curation polypeptide 28651163 28653476 . + . ID=GSCOCP00032458001;Dbxref=InterPro:IPR001753,InterPro:IPR010198,InterPro:IPR018376,PFAM:PF00378,PROSITE:PS00166,SwissProt:P44960,SwissProt:Q8GYN9,SwissProt:Q9CLV5,TAIR:AT1G60550.1,TAIR:AT4G16210.1,TAIR:AT4G16800.1,TIGRFAMs:TIGR01929,TrEMBL:A5B5A4,TrEMBL:D7TDH8,TrEMBL:E5GBI7;Derives_from=GSCOCT00032458001;Name=Cc11_g11340;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,GO:0008935,GO:0009234,CC_EC_number:4.1.3.36,PRODUCT:1%2C4-Dihydroxy-2-naphthoyl-CoA synthase%2C peroxisomal,CC_functional_completeness:complete,CC_gene:MENB,CC_gene:menB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032458001~ 1%2C4-Dihydroxy-2-naphthoyl-CoA synthase%2C peroxisomal~ MENB~ complete;original_location=complement(join(2691267..2691503%2C2690795..2690917%2C2690555..2690656%2C2690321..2690359%2C2690121..2690219%2C2689932..2689979%2C2689671..2689766%2C2689433..2689555%2C2689190..2689306));owner=coffea | |
| 67448 chr11 manual_curation exon 28653360 28653732 . + . Parent=GSCOCT00032458001 | |
| 67449 chr11 manual_curation exon 28653111 28653233 . + . Parent=GSCOCT00032458001 | |
| 67450 chr11 manual_curation exon 28652900 28652995 . + . Parent=GSCOCT00032458001 | |
| 67451 chr11 manual_curation exon 28652687 28652734 . + . Parent=GSCOCT00032458001 | |
| 67452 chr11 manual_curation exon 28652447 28652545 . + . Parent=GSCOCT00032458001 | |
| 67453 chr11 manual_curation exon 28652307 28652345 . + . Parent=GSCOCT00032458001 | |
| 67454 chr11 manual_curation exon 28652010 28652111 . + . Parent=GSCOCT00032458001 | |
| 67455 chr11 manual_curation exon 28651749 28651871 . + . Parent=GSCOCT00032458001 | |
| 67456 chr11 manual_curation exon 28651163 28651399 . + . Parent=GSCOCT00032458001 | |
| 67457 chr11 manual_curation CDS 28653360 28653476 . + 0 Parent=GSCOCT00032458001 | |
| 67458 chr11 manual_curation CDS 28653111 28653233 . + 0 Parent=GSCOCT00032458001 | |
| 67459 chr11 manual_curation CDS 28652900 28652995 . + 0 Parent=GSCOCT00032458001 | |
| 67460 chr11 manual_curation CDS 28652687 28652734 . + 0 Parent=GSCOCT00032458001 | |
| 67461 chr11 manual_curation CDS 28652447 28652545 . + 0 Parent=GSCOCT00032458001 | |
| 67462 chr11 manual_curation CDS 28652307 28652345 . + 0 Parent=GSCOCT00032458001 | |
| 67463 chr11 manual_curation CDS 28652010 28652111 . + 0 Parent=GSCOCT00032458001 | |
| 67464 chr11 manual_curation CDS 28651749 28651871 . + 0 Parent=GSCOCT00032458001 | |
| 67465 chr11 manual_curation CDS 28651163 28651399 . + 0 Parent=GSCOCT00032458001 | |
| 67466 chr11 manual_curation gene 28662402 28668050 . - . ID=GSCOCG00032456001;Name=Cc11_g11350 | |
| 67467 chr11 manual_curation mRNA 28662402 28668050 . - . ID=GSCOCT00032456001;Parent=GSCOCG00032456001;Name=Cc11_g11350 | |
| 67468 chr11 manual_curation polypeptide 28662915 28665658 . - . ID=GSCOCP00032456001;Dbxref=SwissProt:A8MQR0,SwissProt:Q8L7E5,TAIR:AT1G68910.1,TAIR:AT5G11390.1,TrEMBL:A5AF44,TrEMBL:B9RLE5,TrEMBL:D7TA95;Derives_from=GSCOCT00032456001;Name=Cc11_g11350;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative WPP domain-interacting tail-anchored protein 2,CC_functional_completeness:complete,CC_gene:WIT2,CC_gene:WIT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032456001~ Putative WPP domain-interacting tail-anchored protein 2~ WIT2~ complete;original_location=join(2677008..2677539%2C2677664..2678796%2C2678987..2679188%2C2679735..2679751);owner=coffea | |
| 67469 chr11 manual_curation exon 28667816 28668050 . - . Parent=GSCOCT00032456001 | |
| 67470 chr11 manual_curation exon 28665127 28665665 . - . Parent=GSCOCT00032456001 | |
| 67471 chr11 manual_curation exon 28663870 28665002 . - . Parent=GSCOCT00032456001 | |
| 67472 chr11 manual_curation exon 28663478 28663679 . - . Parent=GSCOCT00032456001 | |
| 67473 chr11 manual_curation exon 28662402 28662931 . - . Parent=GSCOCT00032456001 | |
| 67474 chr11 manual_curation CDS 28665127 28665658 . - 0 Parent=GSCOCT00032456001 | |
| 67475 chr11 manual_curation CDS 28663870 28665002 . - 1 Parent=GSCOCT00032456001 | |
| 67476 chr11 manual_curation CDS 28663478 28663679 . - 0 Parent=GSCOCT00032456001 | |
| 67477 chr11 manual_curation CDS 28662915 28662931 . - 1 Parent=GSCOCT00032456001 | |
| 67478 chr11 manual_curation gene 28682692 28686151 . + . ID=GSCOCG00032454001;Name=Cc11_g11360 | |
| 67479 chr11 manual_curation mRNA 28682692 28686151 . + . ID=GSCOCT00032454001;Parent=GSCOCG00032454001;Name=Cc11_g11360 | |
| 67480 chr11 manual_curation polypeptide 28682692 28685484 . + . ID=GSCOCP00032454001;Dbxref=GENE3D:G3DSA:4.10.280.10,InterPro:IPR001092,InterPro:IPR011598,PFAM:PF00010,PROFILE:PS50888,SMART:SM00353,SUPERFAMILY:SSF47459,SwissProt:Q9C670,SwissProt:Q9CAA9,SwissProt:Q9SRT2,TAIR:AT1G26260.1,TAIR:AT1G68920.1,TAIR:AT3G07340.1,TrEMBL:B9HWS9,TrEMBL:B9RLE7,TrEMBL:I1J678;Derives_from=GSCOCT00032454001;Name=Cc11_g11360;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0030528,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative Transcription factor bHLH49,CC_functional_completeness:complete,CC_gene:BHLH49,CC_gene:BHLH76,CC_gene:BHLH62;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032454001~ Putative Transcription factor bHLH49~ BHLH49~ complete;original_location=complement(join(2659072..2659974%2C2658724..2658948%2C2658541..2658606%2C2658376..2658444%2C2657913..2657984%2C2657609..2657809%2C2657328..2657415%2C2657182..2657219));owner=coffea | |
| 67481 chr11 manual_curation exon 28685447 28686151 . + . Parent=GSCOCT00032454001 | |
| 67482 chr11 manual_curation exon 28685251 28685338 . + . Parent=GSCOCT00032454001 | |
| 67483 chr11 manual_curation exon 28684857 28685057 . + . Parent=GSCOCT00032454001 | |
| 67484 chr11 manual_curation exon 28684682 28684753 . + . Parent=GSCOCT00032454001 | |
| 67485 chr11 manual_curation exon 28684222 28684290 . + . Parent=GSCOCT00032454001 | |
| 67486 chr11 manual_curation exon 28684060 28684125 . + . Parent=GSCOCT00032454001 | |
| 67487 chr11 manual_curation exon 28683718 28683942 . + . Parent=GSCOCT00032454001 | |
| 67488 chr11 manual_curation exon 28682692 28683594 . + . Parent=GSCOCT00032454001 | |
| 67489 chr11 manual_curation CDS 28685447 28685484 . + 1 Parent=GSCOCT00032454001 | |
| 67490 chr11 manual_curation CDS 28685251 28685338 . + 0 Parent=GSCOCT00032454001 | |
| 67491 chr11 manual_curation CDS 28684857 28685057 . + 0 Parent=GSCOCT00032454001 | |
| 67492 chr11 manual_curation CDS 28684682 28684753 . + 0 Parent=GSCOCT00032454001 | |
| 67493 chr11 manual_curation CDS 28684222 28684290 . + 0 Parent=GSCOCT00032454001 | |
| 67494 chr11 manual_curation CDS 28684060 28684125 . + 0 Parent=GSCOCT00032454001 | |
| 67495 chr11 manual_curation CDS 28683718 28683942 . + 0 Parent=GSCOCT00032454001 | |
| 67496 chr11 manual_curation CDS 28682692 28683594 . + 0 Parent=GSCOCT00032454001 | |
| 67497 chr11 manual_curation gene 28687335 28689566 . + . ID=GSCOCG00032452001;Name=Cc11_g11370 | |
| 67498 chr11 manual_curation mRNA 28687335 28689566 . + . ID=GSCOCT00032452001;Parent=GSCOCG00032452001;Name=Cc11_g11370 | |
| 67499 chr11 manual_curation polypeptide 28687335 28689566 . + . ID=GSCOCP00032452001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q9CAA8,SwissProt:Q9SHZ8,SwissProt:Q9SMZ2,TAIR:AT1G68930.1,TAIR:AT2G22070.1,TAIR:AT4G33170.1,TIGRFAMs:TIGR00756,TrEMBL:B9HWT0,TrEMBL:D7TA93,TrEMBL:G7LG72;Derives_from=GSCOCT00032452001;Name=Cc11_g11370;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative pentatricopeptide repeat-containing protein At1g68930,CC_functional_completeness:complete,CC_gene:PCMP-H22,CC_gene:PCMP-H41,CC_gene:PCMP-H53;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032452001~ Putative pentatricopeptide repeat-containing protein At1g68930~ PCMP-H22~ complete;original_location=complement(join(2654739..2655331%2C2653100..2654648));owner=coffea | |
| 67500 chr11 manual_curation exon 28688018 28689566 . + . Parent=GSCOCT00032452001 | |
| 67501 chr11 manual_curation exon 28687335 28687927 . + . Parent=GSCOCT00032452001 | |
| 67502 chr11 manual_curation CDS 28688018 28689566 . + 2 Parent=GSCOCT00032452001 | |
| 67503 chr11 manual_curation CDS 28687335 28687927 . + 0 Parent=GSCOCT00032452001 | |
| 67504 chr11 manual_curation gene 28690452 28692780 . - . ID=GSCOCG00032451001;Name=Cc11_g11380 | |
| 67505 chr11 manual_curation mRNA 28690452 28692780 . - . ID=GSCOCT00032451001;Parent=GSCOCG00032451001;Name=Cc11_g11380 | |
| 67506 chr11 manual_curation polypeptide 28690571 28692780 . - . ID=GSCOCP00032451001;Dbxref=SwissProt:A0JPD7,SwissProt:Q641F0,SwissProt:Q9BRX8,TrEMBL:B9HIV7,TrEMBL:B9RLE9,TrEMBL:D7TA92;Derives_from=GSCOCT00032451001;Name=Cc11_g11380;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Redox-regulatory protein FAM213A,CC_functional_completeness:modules,CC_gene:FAM213A,CC_gene:fam213a;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032451001~ Putative Redox-regulatory protein FAM213A~ FAM213A~ modules;original_location=join(2649886..2650038%2C2650405..2651036%2C2651458..2651566%2C2651641..2651961%2C2652048..2652095);owner=coffea | |
| 67507 chr11 manual_curation exon 28692628 28692780 . - . Parent=GSCOCT00032451001 | |
| 67508 chr11 manual_curation exon 28691630 28692261 . - . Parent=GSCOCT00032451001 | |
| 67509 chr11 manual_curation exon 28691100 28691208 . - . Parent=GSCOCT00032451001 | |
| 67510 chr11 manual_curation exon 28690705 28691025 . - . Parent=GSCOCT00032451001 | |
| 67511 chr11 manual_curation exon 28690452 28690618 . - . Parent=GSCOCT00032451001 | |
| 67512 chr11 manual_curation CDS 28692628 28692780 . - 0 Parent=GSCOCT00032451001 | |
| 67513 chr11 manual_curation CDS 28691630 28692261 . - 0 Parent=GSCOCT00032451001 | |
| 67514 chr11 manual_curation CDS 28691100 28691208 . - 2 Parent=GSCOCT00032451001 | |
| 67515 chr11 manual_curation CDS 28690705 28691025 . - 0 Parent=GSCOCT00032451001 | |
| 67516 chr11 manual_curation CDS 28690571 28690618 . - 0 Parent=GSCOCT00032451001 | |
| 67517 chr11 manual_curation gene 28694683 28700274 . - . ID=GSCOCG00032450001;Name=Cc11_g11390 | |
| 67518 chr11 manual_curation mRNA 28694683 28700274 . - . ID=GSCOCT00032450001;Parent=GSCOCG00032450001;Name=Cc11_g11390 | |
| 67519 chr11 manual_curation polypeptide 28694803 28699976 . - . ID=GSCOCP00032450001;Dbxref=GENE3D:G3DSA:1.25.10.10,InterPro:IPR000225,InterPro:IPR003613,InterPro:IPR011989,InterPro:IPR016024,PFAM:PF00514,PFAM:PF04564,SMART:SM00185,SMART:SM00504,SUPERFAMILY:SSF48371,SwissProt:Q9CAA7,SwissProt:Q9LM76,SwissProt:Q9SFX2,TAIR:AT1G20780.1,TAIR:AT1G68940.3,TAIR:AT1G76390.1,TrEMBL:B9HIV6,TrEMBL:B9HWT2,TrEMBL:F6HGF4;Derives_from=GSCOCT00032450001;Name=Cc11_g11390;Ontology_term=CC_evidence_code:ISS,GO:0000151,GO:0004842,GO:0005488,GO:0016567,CC_EC_number:missing_EC_number,PRODUCT:Putative U-box domain-containing protein 43,CC_functional_completeness:modules,CC_gene:PUB42,CC_gene:PUB43,CC_gene:PUB44;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032450001~ Putative U-box domain-containing protein 43~ PUB42~ modules;original_location=join(2642690..2642758%2C2643804..2644964%2C2645492..2645801%2C2646272..2647361%2C2647428..2647863);owner=coffea | |
| 67520 chr11 manual_curation exon 28699908 28700274 . - . Parent=GSCOCT00032450001 | |
| 67521 chr11 manual_curation exon 28697702 28698862 . - . Parent=GSCOCT00032450001 | |
| 67522 chr11 manual_curation exon 28696865 28697174 . - . Parent=GSCOCT00032450001 | |
| 67523 chr11 manual_curation exon 28695305 28696394 . - . Parent=GSCOCT00032450001 | |
| 67524 chr11 manual_curation exon 28694683 28695238 . - . Parent=GSCOCT00032450001 | |
| 67525 chr11 manual_curation CDS 28699908 28699976 . - 0 Parent=GSCOCT00032450001 | |
| 67526 chr11 manual_curation CDS 28697702 28698862 . - 0 Parent=GSCOCT00032450001 | |
| 67527 chr11 manual_curation CDS 28696865 28697174 . - 0 Parent=GSCOCT00032450001 | |
| 67528 chr11 manual_curation CDS 28695305 28696394 . - 1 Parent=GSCOCT00032450001 | |
| 67529 chr11 manual_curation CDS 28694803 28695238 . - 2 Parent=GSCOCT00032450001 | |
| 67530 chr11 manual_curation gene 28707606 28711890 . + . ID=GSCOCG00032449001;Name=Cc11_g11400 | |
| 67531 chr11 manual_curation mRNA 28707606 28711890 . + . ID=GSCOCT00032449001;Parent=GSCOCG00032449001;Name=Cc11_g11400 | |
| 67532 chr11 manual_curation polypeptide 28708101 28711592 . + . ID=GSCOCP00032449001;Dbxref=InterPro:IPR013057,PFAM:PF01490,SwissProt:Q5SPB1,SwissProt:Q9DCP2,SwissProt:Q9JHZ9,TAIR:AT3G30390.1,TAIR:AT3G56200.1,TAIR:AT5G38820.1,TrEMBL:B9N1V7,TrEMBL:B9T738,TrEMBL:F6GVU0;Derives_from=GSCOCT00032449001;Name=Cc11_g11400;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Sodium-coupled neutral amino acid transporter 2,CC_functional_completeness:complete,CC_gene:slc38a2,CC_gene:Slc38a3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032449001~ Putative Sodium-coupled neutral amino acid transporter 2~ slc38a2~ complete;original_location=complement(join(2634313..2634565%2C2634073..2634225%2C2633343..2633546%2C2631775..2632240%2C2631074..2631236));owner=coffea | |
| 67533 chr11 manual_curation exon 28711430 28711890 . + . Parent=GSCOCT00032449001 | |
| 67534 chr11 manual_curation exon 28710426 28710891 . + . Parent=GSCOCT00032449001 | |
| 67535 chr11 manual_curation exon 28709120 28709323 . + . Parent=GSCOCT00032449001 | |
| 67536 chr11 manual_curation exon 28708441 28708593 . + . Parent=GSCOCT00032449001 | |
| 67537 chr11 manual_curation exon 28707606 28708353 . + . Parent=GSCOCT00032449001 | |
| 67538 chr11 manual_curation CDS 28711430 28711592 . + 2 Parent=GSCOCT00032449001 | |
| 67539 chr11 manual_curation CDS 28710426 28710891 . + 1 Parent=GSCOCT00032449001 | |
| 67540 chr11 manual_curation CDS 28709120 28709323 . + 1 Parent=GSCOCT00032449001 | |
| 67541 chr11 manual_curation CDS 28708441 28708593 . + 1 Parent=GSCOCT00032449001 | |
| 67542 chr11 manual_curation CDS 28708101 28708353 . + 0 Parent=GSCOCT00032449001 | |
| 67543 chr11 manual_curation gene 28712242 28724673 . - . ID=GSCOCG00032448001;Name=Cc11_g11410 | |
| 67544 chr11 manual_curation mRNA 28712242 28724673 . - . ID=GSCOCT00032448001;Parent=GSCOCG00032448001;Name=Cc11_g11410 | |
| 67545 chr11 manual_curation polypeptide 28712935 28723914 . - . ID=GSCOCP00032448001;Dbxref=InterPro:IPR002092,PANTHER:PTHR10102,PFAM:PF00940,PROSITE:PS00489,PROSITE:PS00900,SwissProt:Q8L6J5,SwissProt:Q8VWF8,SwissProt:Q93Y94,TAIR:AT1G68990.2,TAIR:AT2G24120.1,TAIR:AT5G15700.2,TrEMBL:B9HIV5,TrEMBL:B9HWT3,TrEMBL:F6HGF2;Derives_from=GSCOCT00032448001;Name=Cc11_g11410;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003899,GO:0006350,CC_EC_number:missing_EC_number,PRODUCT:DNA-directed RNA polymerase 1B%2C mitochondrial,CC_functional_completeness:complete,CC_gene:RPOT1-TOM,CC_gene:RPOT1,CC_gene:RPOT2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032448001~ DNA-directed RNA polymerase 1B%2C mitochondrial~ RPOT1-TOM~ complete;original_location=join(2618752..2619030%2C2620113..2620322%2C2620454..2620581%2C2620718..2620784%2C2620992..2621050%2C2621684..2621801%2C2622585..2622698%2C2623289..2623420%2C2623503..2623919%2C2624430..2624480%2C2625238..2625308%2C2626046..2626130%2C2626361..2626513%2C2626627..2626701%2C2627429..2627518%2C2627641..2627688%2C2628012..2628126%2C2628233..2628336%2C2629621..2629731);owner=coffea | |
| 67546 chr11 manual_curation exon 28723636 28724673 . - . Parent=GSCOCT00032448001 | |
| 67547 chr11 manual_curation exon 28722344 28722553 . - . Parent=GSCOCT00032448001 | |
| 67548 chr11 manual_curation exon 28722085 28722212 . - . Parent=GSCOCT00032448001 | |
| 67549 chr11 manual_curation exon 28721882 28721948 . - . Parent=GSCOCT00032448001 | |
| 67550 chr11 manual_curation exon 28721616 28721674 . - . Parent=GSCOCT00032448001 | |
| 67551 chr11 manual_curation exon 28720865 28720982 . - . Parent=GSCOCT00032448001 | |
| 67552 chr11 manual_curation exon 28719968 28720081 . - . Parent=GSCOCT00032448001 | |
| 67553 chr11 manual_curation exon 28719246 28719377 . - . Parent=GSCOCT00032448001 | |
| 67554 chr11 manual_curation exon 28718747 28719163 . - . Parent=GSCOCT00032448001 | |
| 67555 chr11 manual_curation exon 28718186 28718236 . - . Parent=GSCOCT00032448001 | |
| 67556 chr11 manual_curation exon 28717358 28717428 . - . Parent=GSCOCT00032448001 | |
| 67557 chr11 manual_curation exon 28716536 28716620 . - . Parent=GSCOCT00032448001 | |
| 67558 chr11 manual_curation exon 28716153 28716305 . - . Parent=GSCOCT00032448001 | |
| 67559 chr11 manual_curation exon 28715965 28716039 . - . Parent=GSCOCT00032448001 | |
| 67560 chr11 manual_curation exon 28715148 28715237 . - . Parent=GSCOCT00032448001 | |
| 67561 chr11 manual_curation exon 28714978 28715025 . - . Parent=GSCOCT00032448001 | |
| 67562 chr11 manual_curation exon 28714540 28714654 . - . Parent=GSCOCT00032448001 | |
| 67563 chr11 manual_curation exon 28714330 28714433 . - . Parent=GSCOCT00032448001 | |
| 67564 chr11 manual_curation exon 28712242 28713045 . - . Parent=GSCOCT00032448001 | |
| 67565 chr11 manual_curation CDS 28723636 28723914 . - 0 Parent=GSCOCT00032448001 | |
| 67566 chr11 manual_curation CDS 28722344 28722553 . - 0 Parent=GSCOCT00032448001 | |
| 67567 chr11 manual_curation CDS 28722085 28722212 . - 0 Parent=GSCOCT00032448001 | |
| 67568 chr11 manual_curation CDS 28721882 28721948 . - 2 Parent=GSCOCT00032448001 | |
| 67569 chr11 manual_curation CDS 28721616 28721674 . - 0 Parent=GSCOCT00032448001 | |
| 67570 chr11 manual_curation CDS 28720865 28720982 . - 2 Parent=GSCOCT00032448001 | |
| 67571 chr11 manual_curation CDS 28719968 28720081 . - 0 Parent=GSCOCT00032448001 | |
| 67572 chr11 manual_curation CDS 28719246 28719377 . - 0 Parent=GSCOCT00032448001 | |
| 67573 chr11 manual_curation CDS 28718747 28719163 . - 0 Parent=GSCOCT00032448001 | |
| 67574 chr11 manual_curation CDS 28718186 28718236 . - 0 Parent=GSCOCT00032448001 | |
| 67575 chr11 manual_curation CDS 28717358 28717428 . - 0 Parent=GSCOCT00032448001 | |
| 67576 chr11 manual_curation CDS 28716536 28716620 . - 2 Parent=GSCOCT00032448001 | |
| 67577 chr11 manual_curation CDS 28716153 28716305 . - 0 Parent=GSCOCT00032448001 | |
| 67578 chr11 manual_curation CDS 28715965 28716039 . - 0 Parent=GSCOCT00032448001 | |
| 67579 chr11 manual_curation CDS 28715148 28715237 . - 0 Parent=GSCOCT00032448001 | |
| 67580 chr11 manual_curation CDS 28714978 28715025 . - 0 Parent=GSCOCT00032448001 | |
| 67581 chr11 manual_curation CDS 28714540 28714654 . - 0 Parent=GSCOCT00032448001 | |
| 67582 chr11 manual_curation CDS 28714330 28714433 . - 1 Parent=GSCOCT00032448001 | |
| 67583 chr11 manual_curation CDS 28712935 28713045 . - 0 Parent=GSCOCT00032448001 | |
| 67584 chr11 manual_curation gene 28725465 28731733 . - . ID=GSCOCG00032447001;Name=Cc11_g11420 | |
| 67585 chr11 manual_curation mRNA 28725465 28731733 . - . ID=GSCOCT00032447001;Parent=GSCOCG00032447001;Name=Cc11_g11420 | |
| 67586 chr11 manual_curation polypeptide 28725834 28731525 . - . ID=GSCOCP00032447001;Dbxref=GENE3D:G3DSA:3.30.565.10,HAMAP:MF_00505,InterPro:IPR001404,InterPro:IPR003594,InterPro:IPR019805,InterPro:IPR020568,InterPro:IPR020575,InterPro:IPR020576,PANTHER:PTHR11528,PFAM:PF00183,PFAM:PF02518,PIR:PIRSF002583,PRINTS:PR00775,PROSITE:PS00298,SMART:SM00387,SUPERFAMILY:SSF54211,SUPERFAMILY:SSF55874,SwissProt:P24724,SwissProt:P36183,SwissProt:Q90474,TAIR:AT2G04030.1,TAIR:AT3G07770.1,TAIR:AT4G24190.1,TrEMBL:B9HIV4,TrEMBL:D0EWD6,TrEMBL:F6HGF1;Derives_from=GSCOCT00032447001;Name=Cc11_g11420;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0006457,GO:0006950,GO:0051082,CC_EC_number:missing_EC_number,PRODUCT:Putative Heat shock protein 90,CC_functional_completeness:complete,CC_gene:TP02_0244,CC_gene:hsp90a.1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032447001~ Putative Heat shock protein 90~ TP02_0244~ complete;original_location=join(2611141..2611428%2C2611830..2611903%2C2612157..2612282%2C2612366..2612459%2C2612555..2612638%2C2612761..2612904%2C2613122..2613238%2C2613661..2613705%2C2613794..2613874%2C2613987..2614091%2C2614167..2614307%2C2614663..2614755%2C2614916..2614993%2C2615086..2615340%2C2615557..2615659%2C2615746..2615920%2C2616018..2616123%2C2616434..2616523%2C2616632..2616832);owner=coffea | |
| 67587 chr11 manual_curation exon 28731238 28731733 . - . Parent=GSCOCT00032447001 | |
| 67588 chr11 manual_curation exon 28730763 28730836 . - . Parent=GSCOCT00032447001 | |
| 67589 chr11 manual_curation exon 28730384 28730509 . - . Parent=GSCOCT00032447001 | |
| 67590 chr11 manual_curation exon 28730207 28730300 . - . Parent=GSCOCT00032447001 | |
| 67591 chr11 manual_curation exon 28730028 28730111 . - . Parent=GSCOCT00032447001 | |
| 67592 chr11 manual_curation exon 28729762 28729905 . - . Parent=GSCOCT00032447001 | |
| 67593 chr11 manual_curation exon 28729428 28729544 . - . Parent=GSCOCT00032447001 | |
| 67594 chr11 manual_curation exon 28728961 28729005 . - . Parent=GSCOCT00032447001 | |
| 67595 chr11 manual_curation exon 28728792 28728872 . - . Parent=GSCOCT00032447001 | |
| 67596 chr11 manual_curation exon 28728575 28728679 . - . Parent=GSCOCT00032447001 | |
| 67597 chr11 manual_curation exon 28728359 28728499 . - . Parent=GSCOCT00032447001 | |
| 67598 chr11 manual_curation exon 28727911 28728003 . - . Parent=GSCOCT00032447001 | |
| 67599 chr11 manual_curation exon 28727673 28727750 . - . Parent=GSCOCT00032447001 | |
| 67600 chr11 manual_curation exon 28727326 28727580 . - . Parent=GSCOCT00032447001 | |
| 67601 chr11 manual_curation exon 28727007 28727109 . - . Parent=GSCOCT00032447001 | |
| 67602 chr11 manual_curation exon 28726746 28726920 . - . Parent=GSCOCT00032447001 | |
| 67603 chr11 manual_curation exon 28726543 28726648 . - . Parent=GSCOCT00032447001 | |
| 67604 chr11 manual_curation exon 28726143 28726232 . - . Parent=GSCOCT00032447001 | |
| 67605 chr11 manual_curation exon 28725465 28726034 . - . Parent=GSCOCT00032447001 | |
| 67606 chr11 manual_curation CDS 28731238 28731525 . - 0 Parent=GSCOCT00032447001 | |
| 67607 chr11 manual_curation CDS 28730763 28730836 . - 0 Parent=GSCOCT00032447001 | |
| 67608 chr11 manual_curation CDS 28730384 28730509 . - 2 Parent=GSCOCT00032447001 | |
| 67609 chr11 manual_curation CDS 28730207 28730300 . - 2 Parent=GSCOCT00032447001 | |
| 67610 chr11 manual_curation CDS 28730028 28730111 . - 0 Parent=GSCOCT00032447001 | |
| 67611 chr11 manual_curation CDS 28729762 28729905 . - 0 Parent=GSCOCT00032447001 | |
| 67612 chr11 manual_curation CDS 28729428 28729544 . - 0 Parent=GSCOCT00032447001 | |
| 67613 chr11 manual_curation CDS 28728961 28729005 . - 0 Parent=GSCOCT00032447001 | |
| 67614 chr11 manual_curation CDS 28728792 28728872 . - 0 Parent=GSCOCT00032447001 | |
| 67615 chr11 manual_curation CDS 28728575 28728679 . - 0 Parent=GSCOCT00032447001 | |
| 67616 chr11 manual_curation CDS 28728359 28728499 . - 0 Parent=GSCOCT00032447001 | |
| 67617 chr11 manual_curation CDS 28727911 28728003 . - 0 Parent=GSCOCT00032447001 | |
| 67618 chr11 manual_curation CDS 28727673 28727750 . - 0 Parent=GSCOCT00032447001 | |
| 67619 chr11 manual_curation CDS 28727326 28727580 . - 0 Parent=GSCOCT00032447001 | |
| 67620 chr11 manual_curation CDS 28727007 28727109 . - 0 Parent=GSCOCT00032447001 | |
| 67621 chr11 manual_curation CDS 28726746 28726920 . - 1 Parent=GSCOCT00032447001 | |
| 67622 chr11 manual_curation CDS 28726543 28726648 . - 2 Parent=GSCOCT00032447001 | |
| 67623 chr11 manual_curation CDS 28726143 28726232 . - 0 Parent=GSCOCT00032447001 | |
| 67624 chr11 manual_curation CDS 28725834 28726034 . - 0 Parent=GSCOCT00032447001 | |
| 67625 chr11 manual_curation gene 28742359 28743783 . + . ID=GSCOCG00032446001;Name=Cc11_g11430 | |
| 67626 chr11 manual_curation mRNA 28742359 28743783 . + . ID=GSCOCT00032446001;Parent=GSCOCG00032446001;Name=Cc11_g11430 | |
| 67627 chr11 manual_curation polypeptide 28742359 28743783 . + . ID=GSCOCP00032446001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,SwissProt:Q9C9B0,SwissProt:Q9LNE6,SwissProt:Q9LZD8,TAIR:AT1G51210.1,TAIR:AT1G73880.1,TAIR:AT5G03490.1,TrEMBL:B9HWT6,TrEMBL:B9RLF6,TrEMBL:Q5H859;Derives_from=GSCOCT00032446001;Name=Cc11_g11430;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:UDP-glycosyltransferase 89A2,CC_functional_completeness:complete,CC_gene:UGT89A2,CC_gene:UGT89B1,CC_gene:UGT89C1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032446001~ UDP-glycosyltransferase 89A2~ UGT89A2~ complete;original_location=complement(2598883..2600307);owner=coffea | |
| 67628 chr11 manual_curation exon 28742359 28743783 . + . Parent=GSCOCT00032446001 | |
| 67629 chr11 manual_curation CDS 28742359 28743783 . + 0 Parent=GSCOCT00032446001 | |
| 67630 chr11 manual_curation gene 28745808 28747307 . + . ID=GSCOCG00032445001;Name=Cc11_g11440 | |
| 67631 chr11 manual_curation mRNA 28745808 28747307 . + . ID=GSCOCT00032445001;Parent=GSCOCG00032445001;Name=Cc11_g11440 | |
| 67632 chr11 manual_curation polypeptide 28745808 28747307 . + . ID=GSCOCP00032445001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,SwissProt:Q9C9B0,SwissProt:Q9LNE6,SwissProt:Q9LZD8,TAIR:AT1G51210.1,TAIR:AT1G73880.1,TAIR:AT5G03490.1,TrEMBL:B9HWT6,TrEMBL:B9RLF6,TrEMBL:Q5H859;Derives_from=GSCOCT00032445001;Name=Cc11_g11440;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:UDP-glycosyltransferase 89A2,CC_functional_completeness:complete,CC_gene:UGT89A2,CC_gene:UGT89B1,CC_gene:UGT89C1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032445001~ UDP-glycosyltransferase 89A2~ UGT89A2~ complete;original_location=complement(2595359..2596858);owner=coffea | |
| 67633 chr11 manual_curation exon 28745808 28747307 . + . Parent=GSCOCT00032445001 | |
| 67634 chr11 manual_curation CDS 28745808 28747307 . + 0 Parent=GSCOCT00032445001 | |
| 67635 chr11 manual_curation gene 28747559 28748302 . - . ID=GSCOCG00032444001;Name=Cc11_g11450 | |
| 67636 chr11 manual_curation mRNA 28747559 28748302 . - . ID=GSCOCT00032444001;Parent=GSCOCG00032444001;Name=Cc11_g11450 | |
| 67637 chr11 manual_curation polypeptide 28747933 28748206 . - . ID=GSCOCP00032444001;Derives_from=GSCOCT00032444001;Name=Cc11_g11450;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032444001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(2594460..2594563%2C2594655..2594733);owner=coffea | |
| 67638 chr11 manual_curation exon 28748103 28748302 . - . Parent=GSCOCT00032444001 | |
| 67639 chr11 manual_curation exon 28747559 28748011 . - . Parent=GSCOCT00032444001 | |
| 67640 chr11 manual_curation CDS 28748103 28748206 . - 0 Parent=GSCOCT00032444001 | |
| 67641 chr11 manual_curation CDS 28747933 28748011 . - 2 Parent=GSCOCT00032444001 | |
| 67642 chr11 manual_curation gene 28748569 28752467 . - . ID=GSCOCG00032443001;Name=Cc11_g11460 | |
| 67643 chr11 manual_curation mRNA 28748569 28752467 . - . ID=GSCOCT00032443001;Parent=GSCOCG00032443001;Name=Cc11_g11460 | |
| 67644 chr11 manual_curation polypeptide 28748837 28752467 . - . ID=GSCOCP00032443001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q9FIX3,SwissProt:Q9LFC5,SwissProt:Q9LMY5,TAIR:AT1G13630.1,TAIR:AT5G01110.1,TAIR:AT5G39710.1,TIGRFAMs:TIGR00756,TrEMBL:B9HWT8,TrEMBL:B9RLG0,TrEMBL:D7TA84;Derives_from=GSCOCT00032443001;Name=Cc11_g11460;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative pentatricopeptide repeat-containing protein At1g13630,CC_functional_completeness:complete,CC_gene:At1g13630,CC_gene:EMB2745,CC_gene:At5g01110;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032443001~ Putative pentatricopeptide repeat-containing protein At1g13630~ At1g13630~ complete;original_location=join(2590199..2590643%2C2591666..2593714%2C2593792..2593829);owner=coffea | |
| 67645 chr11 manual_curation exon 28752023 28752467 . - . Parent=GSCOCT00032443001 | |
| 67646 chr11 manual_curation exon 28748952 28751000 . - . Parent=GSCOCT00032443001 | |
| 67647 chr11 manual_curation exon 28748569 28748874 . - . Parent=GSCOCT00032443001 | |
| 67648 chr11 manual_curation CDS 28752023 28752467 . - 0 Parent=GSCOCT00032443001 | |
| 67649 chr11 manual_curation CDS 28748952 28751000 . - 1 Parent=GSCOCT00032443001 | |
| 67650 chr11 manual_curation CDS 28748837 28748874 . - 1 Parent=GSCOCT00032443001 | |
| 67651 chr11 manual_curation gene 28755226 28758146 . + . ID=GSCOCG00032442001;Name=Cc11_g11470 | |
| 67652 chr11 manual_curation mRNA 28755226 28758146 . + . ID=GSCOCT00032442001;Parent=GSCOCG00032442001;Name=Cc11_g11470 | |
| 67653 chr11 manual_curation polypeptide 28755313 28757920 . + . ID=GSCOCP00032442001;Dbxref=InterPro:IPR005019,InterPro:IPR011257,PFAM:PF03352,SUPERFAMILY:SSF48150,SwissProt:P05100,SwissProt:P44321,SwissProt:Q7VG78,TAIR:AT1G13635.1,TAIR:AT1G75090.1,TAIR:AT5G57970.1,TrEMBL:B9RLG1,TrEMBL:C6TKE8,TrEMBL:I1J6K9;Derives_from=GSCOCT00032442001;Name=Cc11_g11470;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0006281,GO:0006284,GO:0008725,CC_EC_number:3.2.2.20,PRODUCT:Putative DNA-3-methyladenine glycosylase,CC_functional_completeness:modules,CC_gene:guaA,CC_gene:tag;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032442001~ Putative DNA-3-methyladenine glycosylase~ guaA~ modules;original_location=complement(join(2586963..2587353%2C2585960..2586017%2C2585759..2585842%2C2585294..2585435%2C2584746..2585024));owner=coffea | |
| 67654 chr11 manual_curation exon 28757642 28758146 . + . Parent=GSCOCT00032442001 | |
| 67655 chr11 manual_curation exon 28757231 28757372 . + . Parent=GSCOCT00032442001 | |
| 67656 chr11 manual_curation exon 28756824 28756907 . + . Parent=GSCOCT00032442001 | |
| 67657 chr11 manual_curation exon 28756649 28756706 . + . Parent=GSCOCT00032442001 | |
| 67658 chr11 manual_curation exon 28755226 28755703 . + . Parent=GSCOCT00032442001 | |
| 67659 chr11 manual_curation CDS 28757642 28757920 . + 0 Parent=GSCOCT00032442001 | |
| 67660 chr11 manual_curation CDS 28757231 28757372 . + 2 Parent=GSCOCT00032442001 | |
| 67661 chr11 manual_curation CDS 28756824 28756907 . + 2 Parent=GSCOCT00032442001 | |
| 67662 chr11 manual_curation CDS 28756649 28756706 . + 1 Parent=GSCOCT00032442001 | |
| 67663 chr11 manual_curation CDS 28755313 28755703 . + 0 Parent=GSCOCT00032442001 | |
| 67664 chr11 manual_curation gene 28761947 28766072 . - . ID=GSCOCG00032441001;Name=Cc11_g11480 | |
| 67665 chr11 manual_curation mRNA 28761947 28766072 . - . ID=GSCOCT00032441001;Parent=GSCOCG00032441001;Name=Cc11_g11480 | |
| 67666 chr11 manual_curation polypeptide 28762770 28764695 . - . ID=GSCOCP00032441001;Dbxref=InterPro:IPR000403,PFAM:PF00454,SwissProt:Q5ZIK0,SwissProt:Q9C671,TAIR:AT1G13640.1,TAIR:AT1G26270.1,TAIR:AT2G03890.1,TrEMBL:A5B9G7,TrEMBL:B9RLG3,TrEMBL:F6HGE9;Derives_from=GSCOCT00032441001;Name=Cc11_g11480;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Probable phosphatidylinositol 4-kinase type 2-beta At1g26270,CC_functional_completeness:complete,CC_gene:At1g26270,CC_gene:PI4K2B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032441001~ Probable phosphatidylinositol 4-kinase type 2-beta At1g26270~ At1g26270~ complete;original_location=2577971..2579896;owner=coffea | |
| 67667 chr11 manual_curation exon 28761947 28766072 . - . Parent=GSCOCT00032441001 | |
| 67668 chr11 manual_curation CDS 28762770 28764695 . - 0 Parent=GSCOCT00032441001 | |
| 67669 chr11 manual_curation gene 28779027 28779749 . - . ID=GSCOCG00032440001;Name=Cc11_g11490 | |
| 67670 chr11 manual_curation mRNA 28779027 28779749 . - . ID=GSCOCT00032440001;Parent=GSCOCG00032440001;Name=Cc11_g11490 | |
| 67671 chr11 manual_curation polypeptide 28779123 28779497 . - . ID=GSCOCP00032440001;Derives_from=GSCOCT00032440001;Name=Cc11_g11490;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032440001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=2563169..2563543;owner=coffea | |
| 67672 chr11 manual_curation exon 28779027 28779749 . - . Parent=GSCOCT00032440001 | |
| 67673 chr11 manual_curation CDS 28779123 28779497 . - 0 Parent=GSCOCT00032440001 | |
| 67674 chr11 manual_curation gene 28791303 28793780 . - . ID=GSCOCG00032436001;Name=Cc11_g11500 | |
| 67675 chr11 manual_curation mRNA 28791303 28793780 . - . ID=GSCOCT00032436001;Parent=GSCOCG00032436001;Name=Cc11_g11500 | |
| 67676 chr11 manual_curation polypeptide 28792723 28793436 . - . ID=GSCOCP00032436001;Derives_from=GSCOCT00032436001;Name=Cc11_g11500;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032436001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(2549230..2549421%2C2549884..2549943);owner=coffea | |
| 67677 chr11 manual_curation exon 28792146 28792272 . - . Parent=GSCOCT00032436001 | |
| 67678 chr11 manual_curation exon 28791829 28792032 . - . Parent=GSCOCT00032436001 | |
| 67679 chr11 manual_curation exon 28791303 28791714 . - . Parent=GSCOCT00032436001 | |
| 67680 chr11 manual_curation exon 28793245 28793780 . - . Parent=GSCOCT00032436001 | |
| 67681 chr11 manual_curation exon 28792634 28792782 . - . Parent=GSCOCT00032436001 | |
| 67682 chr11 manual_curation CDS 28793245 28793436 . - 0 Parent=GSCOCT00032436001 | |
| 67683 chr11 manual_curation CDS 28792723 28792782 . - 0 Parent=GSCOCT00032436001 | |
| 67684 chr11 manual_curation gene 28798161 28803784 . + . ID=GSCOCG00032435001;Name=Cc11_g11510 | |
| 67685 chr11 manual_curation mRNA 28798161 28803784 . + . ID=GSCOCT00032435001;Parent=GSCOCG00032435001;Name=Cc11_g11510 | |
| 67686 chr11 manual_curation polypeptide 28798523 28803692 . + . ID=GSCOCP00032435001;Dbxref=GENE3D:G3DSA:4.10.280.10,InterPro:IPR001092,InterPro:IPR011598,PFAM:PF00010,PROFILE:PS50888,SMART:SM00353,SUPERFAMILY:SSF47459,SwissProt:Q9CAA4,SwissProt:Q9FMB6,SwissProt:Q9LEZ3,TAIR:AT1G69010.1,TAIR:AT5G08130.5,TAIR:AT5G38860.1,TrEMBL:B9RLG5,TrEMBL:C6T7V4,TrEMBL:D7TA75;Derives_from=GSCOCT00032435001;Name=Cc11_g11510;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0030528,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Transcription factor BIM2,CC_functional_completeness:complete,CC_gene:BIM2,CC_gene:BIM1,CC_gene:BIM3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032435001~ Transcription factor BIM2~ BIM2~ complete;original_location=complement(join(2544047..2544143%2C2543710..2543800%2C2541320..2541389%2C2541126..2541221%2C2540180..2540595%2C2539216..2539345%2C2538974..2539078));owner=coffea | |
| 67687 chr11 manual_curation exon 28798161 28798320 . + . Parent=GSCOCT00032435001 | |
| 67688 chr11 manual_curation exon 28803588 28803784 . + . Parent=GSCOCT00032435001 | |
| 67689 chr11 manual_curation exon 28803321 28803450 . + . Parent=GSCOCT00032435001 | |
| 67690 chr11 manual_curation exon 28802071 28802486 . + . Parent=GSCOCT00032435001 | |
| 67691 chr11 manual_curation exon 28801445 28801540 . + . Parent=GSCOCT00032435001 | |
| 67692 chr11 manual_curation exon 28801277 28801346 . + . Parent=GSCOCT00032435001 | |
| 67693 chr11 manual_curation exon 28798866 28798956 . + . Parent=GSCOCT00032435001 | |
| 67694 chr11 manual_curation exon 28798484 28798619 . + . Parent=GSCOCT00032435001 | |
| 67695 chr11 manual_curation CDS 28803588 28803692 . + 0 Parent=GSCOCT00032435001 | |
| 67696 chr11 manual_curation CDS 28803321 28803450 . + 2 Parent=GSCOCT00032435001 | |
| 67697 chr11 manual_curation CDS 28802071 28802486 . + 0 Parent=GSCOCT00032435001 | |
| 67698 chr11 manual_curation CDS 28801445 28801540 . + 0 Parent=GSCOCT00032435001 | |
| 67699 chr11 manual_curation CDS 28801277 28801346 . + 2 Parent=GSCOCT00032435001 | |
| 67700 chr11 manual_curation CDS 28798866 28798956 . + 1 Parent=GSCOCT00032435001 | |
| 67701 chr11 manual_curation CDS 28798523 28798619 . + 0 Parent=GSCOCT00032435001 | |
| 67702 chr11 manual_curation gene 28804016 28813076 . - . ID=GSCOCG00032434001;Name=Cc11_g11520 | |
| 67703 chr11 manual_curation mRNA 28804016 28813076 . - . ID=GSCOCT00032434001;Parent=GSCOCG00032434001;Name=Cc11_g11520 | |
| 67704 chr11 manual_curation polypeptide 28804887 28813076 . - . ID=GSCOCP00032434001;Dbxref=InterPro:IPR001375,InterPro:IPR002470,InterPro:IPR004106,PANTHER:PTHR11757,PFAM:PF00326,PFAM:PF02897,PRINTS:PR00862,SUPERFAMILY:SSF50993,SwissProt:P24555,SwissProt:P55627,SwissProt:Q59536,TAIR:AT1G50380.1,TAIR:AT1G69020.1,TAIR:AT5G66960.1,TrEMBL:B9RLG6,TrEMBL:F6HGE8,TrEMBL:G7JZA5;Derives_from=GSCOCT00032434001;Name=Cc11_g11520;Ontology_term=CC_evidence_code:ISS,GO:0004252,GO:0006508,GO:0008236,CC_EC_number:3.4.21.83,PRODUCT:Putative Protease 2,CC_functional_completeness:complete,CC_gene:ptrB,CC_gene:NGR_a01920;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032434001~ Putative Protease 2~ ptrB~ complete;original_location=join(2529590..2529981%2C2530980..2531143%2C2531634..2531872%2C2532173..2532379%2C2532657..2532791%2C2533669..2533797%2C2534709..2535118%2C2535708..2535924%2C2537140..2537333%2C2537587..2537779);owner=coffea | |
| 67705 chr11 manual_curation exon 28812685 28813076 . - . Parent=GSCOCT00032434001 | |
| 67706 chr11 manual_curation exon 28811523 28811686 . - . Parent=GSCOCT00032434001 | |
| 67707 chr11 manual_curation exon 28810794 28811032 . - . Parent=GSCOCT00032434001 | |
| 67708 chr11 manual_curation exon 28810287 28810493 . - . Parent=GSCOCT00032434001 | |
| 67709 chr11 manual_curation exon 28809875 28810009 . - . Parent=GSCOCT00032434001 | |
| 67710 chr11 manual_curation exon 28808869 28808997 . - . Parent=GSCOCT00032434001 | |
| 67711 chr11 manual_curation exon 28807548 28807957 . - . Parent=GSCOCT00032434001 | |
| 67712 chr11 manual_curation exon 28806742 28806958 . - . Parent=GSCOCT00032434001 | |
| 67713 chr11 manual_curation exon 28805333 28805526 . - . Parent=GSCOCT00032434001 | |
| 67714 chr11 manual_curation exon 28804016 28805079 . - . Parent=GSCOCT00032434001 | |
| 67715 chr11 manual_curation CDS 28812685 28813076 . - 0 Parent=GSCOCT00032434001 | |
| 67716 chr11 manual_curation CDS 28811523 28811686 . - 2 Parent=GSCOCT00032434001 | |
| 67717 chr11 manual_curation CDS 28810794 28811032 . - 1 Parent=GSCOCT00032434001 | |
| 67718 chr11 manual_curation CDS 28810287 28810493 . - 0 Parent=GSCOCT00032434001 | |
| 67719 chr11 manual_curation CDS 28809875 28810009 . - 0 Parent=GSCOCT00032434001 | |
| 67720 chr11 manual_curation CDS 28808869 28808997 . - 0 Parent=GSCOCT00032434001 | |
| 67721 chr11 manual_curation CDS 28807548 28807957 . - 0 Parent=GSCOCT00032434001 | |
| 67722 chr11 manual_curation CDS 28806742 28806958 . - 2 Parent=GSCOCT00032434001 | |
| 67723 chr11 manual_curation CDS 28805333 28805526 . - 0 Parent=GSCOCT00032434001 | |
| 67724 chr11 manual_curation CDS 28804887 28805079 . - 2 Parent=GSCOCT00032434001 | |
| 67725 chr11 manual_curation gene 28813798 28817537 . + . ID=GSCOCG00032433001;Name=Cc11_g11530 | |
| 67726 chr11 manual_curation mRNA 28813798 28817537 . + . ID=GSCOCT00032433001;Parent=GSCOCG00032433001;Name=Cc11_g11530 | |
| 67727 chr11 manual_curation polypeptide 28813798 28817537 . + . ID=GSCOCP00032433001;Dbxref=InterPro:IPR001077,PFAM:PF00891,SwissProt:B0EXJ8,SwissProt:Q6VMW0,SwissProt:Q8GSN1,TAIR:AT4G35150.1,TAIR:AT4G35160.1,TAIR:AT5G54160.1,TrEMBL:D3KY99,TrEMBL:D4QGR7,TrEMBL:F6H5H6;Derives_from=GSCOCT00032433001;Name=Cc11_g11530;Ontology_term=CC_evidence_code:ISS,GO:0008171,CC_EC_number:2.1.1.146,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:16OMT,CC_gene:OMT2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032433001~ Hypothetical protein~ 16OMT~ missing_functional_completeness;original_location=complement(join(2528313..2528868%2C2525579..2526066%2C2525129..2525437));owner=coffea | |
| 67728 chr11 manual_curation exon 28817229 28817537 . + . Parent=GSCOCT00032433001 | |
| 67729 chr11 manual_curation exon 28816600 28817087 . + . Parent=GSCOCT00032433001 | |
| 67730 chr11 manual_curation exon 28813798 28814353 . + . Parent=GSCOCT00032433001 | |
| 67731 chr11 manual_curation CDS 28817229 28817537 . + 0 Parent=GSCOCT00032433001 | |
| 67732 chr11 manual_curation CDS 28816600 28817087 . + 1 Parent=GSCOCT00032433001 | |
| 67733 chr11 manual_curation CDS 28813798 28814353 . + 0 Parent=GSCOCT00032433001 | |
| 67734 chr11 manual_curation gene 28822954 28823361 . + . ID=GSCOCG00032431001;Name=Cc11_g11540 | |
| 67735 chr11 manual_curation mRNA 28822954 28823361 . + . ID=GSCOCT00032431001;Parent=GSCOCG00032431001;Name=Cc11_g11540 | |
| 67736 chr11 manual_curation polypeptide 28822954 28823361 . + . ID=GSCOCP00032431001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002403,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00465,SUPERFAMILY:SSF48264,SwissProt:O81117,SwissProt:P85191,SwissProt:P98188,TAIR:AT2G27690.1,TAIR:AT3G48520.1,TAIR:AT5G63450.1,TrEMBL:Q8W2N1,TrEMBL:Q8W2N2,TrEMBL:Q8W2N4;Derives_from=GSCOCT00032431001;Name=Cc11_g11540;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,CC_EC_number:1.14.14.1,PRODUCT:Cytochrome P450 94A1,CC_functional_completeness:fragment,CC_gene:CYP94A1,CC_gene:CYP94A2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032431001~ Cytochrome P450 94A1~ CYP94A1~ fragment;original_location=complement(2519305..2519712);owner=coffea | |
| 67737 chr11 manual_curation exon 28822954 28823361 . + . Parent=GSCOCT00032431001 | |
| 67738 chr11 manual_curation CDS 28822954 28823361 . + 0 Parent=GSCOCT00032431001 | |
| 67739 chr11 manual_curation gene 28824983 28829811 . - . ID=GSCOCG00032430001;Name=Cc11_g11550 | |
| 67740 chr11 manual_curation mRNA 28824983 28829811 . - . ID=GSCOCT00032430001;Parent=GSCOCG00032430001;Name=Cc11_g11550 | |
| 67741 chr11 manual_curation polypeptide 28825311 28827727 . - . ID=GSCOCP00032430001;Dbxref=TAIR:AT1G13650.2,TrEMBL:B9HIU6,TrEMBL:B9RLG9,TrEMBL:D7TA77;Derives_from=GSCOCT00032430001;Name=Cc11_g11550;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032430001~ Putative uncharacterized protein~ unknown_gene~ modules;original_location=join(2514939..2515003%2C2515590..2516562%2C2516651..2517150%2C2517247..2517355);owner=coffea | |
| 67742 chr11 manual_curation exon 28829349 28829811 . - . Parent=GSCOCT00032430001 | |
| 67743 chr11 manual_curation exon 28829050 28829127 . - . Parent=GSCOCT00032430001 | |
| 67744 chr11 manual_curation exon 28827663 28827763 . - . Parent=GSCOCT00032430001 | |
| 67745 chr11 manual_curation exon 28826104 28827076 . - . Parent=GSCOCT00032430001 | |
| 67746 chr11 manual_curation exon 28825516 28826015 . - . Parent=GSCOCT00032430001 | |
| 67747 chr11 manual_curation exon 28824983 28825419 . - . Parent=GSCOCT00032430001 | |
| 67748 chr11 manual_curation CDS 28827663 28827727 . - 0 Parent=GSCOCT00032430001 | |
| 67749 chr11 manual_curation CDS 28826104 28827076 . - 2 Parent=GSCOCT00032430001 | |
| 67750 chr11 manual_curation CDS 28825516 28826015 . - 0 Parent=GSCOCT00032430001 | |
| 67751 chr11 manual_curation CDS 28825311 28825419 . - 2 Parent=GSCOCT00032430001 | |
| 67752 chr11 manual_curation gene 28835935 28840588 . - . ID=GSCOCG00032429001;Name=Cc11_g11560 | |
| 67753 chr11 manual_curation mRNA 28835935 28840588 . - . ID=GSCOCT00032429001;Parent=GSCOCG00032429001;Name=Cc11_g11560 | |
| 67754 chr11 manual_curation polypeptide 28836255 28840506 . - . ID=GSCOCP00032429001;Dbxref=InterPro:IPR007508,InterPro:IPR018033,PFAM:PF04414,PIR:PIRSF016210,SwissProt:Q46AI3,SwissProt:Q8PS92,SwissProt:Q9ZPQ3,TAIR:AT2G03800.1,TrEMBL:B9RE88,TrEMBL:C6TL92,TrEMBL:G7LG90;Derives_from=GSCOCT00032429001;Name=Cc11_g11560;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:D-aminoacyl-tRNA deacylase,CC_functional_completeness:complete,CC_gene:GEK1,CC_gene:dtdA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032429001~ D-aminoacyl-tRNA deacylase~ GEK1~ complete;original_location=join(2502160..2502448%2C2502920..2503062%2C2503271..2503334%2C2503712..2503764%2C2504231..2504286%2C2504562..2504636%2C2505115..2505303%2C2506324..2506411);owner=coffea | |
| 67755 chr11 manual_curation exon 28840218 28840588 . - . Parent=GSCOCT00032429001 | |
| 67756 chr11 manual_curation exon 28839604 28839746 . - . Parent=GSCOCT00032429001 | |
| 67757 chr11 manual_curation exon 28839332 28839395 . - . Parent=GSCOCT00032429001 | |
| 67758 chr11 manual_curation exon 28838902 28838954 . - . Parent=GSCOCT00032429001 | |
| 67759 chr11 manual_curation exon 28838380 28838435 . - . Parent=GSCOCT00032429001 | |
| 67760 chr11 manual_curation exon 28838030 28838104 . - . Parent=GSCOCT00032429001 | |
| 67761 chr11 manual_curation exon 28837363 28837551 . - . Parent=GSCOCT00032429001 | |
| 67762 chr11 manual_curation exon 28835935 28836342 . - . Parent=GSCOCT00032429001 | |
| 67763 chr11 manual_curation CDS 28840218 28840506 . - 0 Parent=GSCOCT00032429001 | |
| 67764 chr11 manual_curation CDS 28839604 28839746 . - 1 Parent=GSCOCT00032429001 | |
| 67765 chr11 manual_curation CDS 28839332 28839395 . - 0 Parent=GSCOCT00032429001 | |
| 67766 chr11 manual_curation CDS 28838902 28838954 . - 1 Parent=GSCOCT00032429001 | |
| 67767 chr11 manual_curation CDS 28838380 28838435 . - 0 Parent=GSCOCT00032429001 | |
| 67768 chr11 manual_curation CDS 28838030 28838104 . - 2 Parent=GSCOCT00032429001 | |
| 67769 chr11 manual_curation CDS 28837363 28837551 . - 2 Parent=GSCOCT00032429001 | |
| 67770 chr11 manual_curation CDS 28836255 28836342 . - 2 Parent=GSCOCT00032429001 | |
| 67771 chr11 manual_curation gene 28841528 28845298 . + . ID=GSCOCG00032428001;Name=Cc11_g11570 | |
| 67772 chr11 manual_curation mRNA 28841528 28845298 . + . ID=GSCOCT00032428001;Parent=GSCOCG00032428001;Name=Cc11_g11570 | |
| 67773 chr11 manual_curation polypeptide 28841563 28845267 . + . ID=GSCOCP00032428001;Dbxref=GENE3D:G3DSA:1.20.58.190,GENE3D:G3DSA:1.20.58.200,InterPro:IPR002848,InterPro:IPR016068,InterPro:IPR016069,PANTHER:PTHR10741,PFAM:PF01997,SUPERFAMILY:SSF74784,SwissProt:Q4R599,SwissProt:Q5RC21,SwissProt:Q9JHB5,TAIR:AT2G03780.1,TrEMBL:D7TA79,TrEMBL:G7LG96,TrEMBL:I1LG08;Derives_from=GSCOCT00032428001;Name=Cc11_g11570;Ontology_term=CC_evidence_code:ISS,GO:0043565,CC_EC_number:missing_EC_number,PRODUCT:Putative Translin-associated protein X,CC_functional_completeness:modules,CC_gene:TSNAX,CC_gene:Tsnax;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032428001~ Putative Translin-associated protein X~ TSNAX~ modules;original_location=complement(join(2501013..2501103%2C2500732..2500886%2C2499425..2499504%2C2498972..2499113%2C2498736..2498885%2C2498252..2498453%2C2497399..2497499));owner=coffea | |
| 67774 chr11 manual_curation exon 28845167 28845298 . + . Parent=GSCOCT00032428001 | |
| 67775 chr11 manual_curation exon 28844213 28844414 . + . Parent=GSCOCT00032428001 | |
| 67776 chr11 manual_curation exon 28843781 28843930 . + . Parent=GSCOCT00032428001 | |
| 67777 chr11 manual_curation exon 28843553 28843694 . + . Parent=GSCOCT00032428001 | |
| 67778 chr11 manual_curation exon 28843162 28843241 . + . Parent=GSCOCT00032428001 | |
| 67779 chr11 manual_curation exon 28841780 28841934 . + . Parent=GSCOCT00032428001 | |
| 67780 chr11 manual_curation exon 28841528 28841653 . + . Parent=GSCOCT00032428001 | |
| 67781 chr11 manual_curation CDS 28845167 28845267 . + 1 Parent=GSCOCT00032428001 | |
| 67782 chr11 manual_curation CDS 28844213 28844414 . + 0 Parent=GSCOCT00032428001 | |
| 67783 chr11 manual_curation CDS 28843781 28843930 . + 0 Parent=GSCOCT00032428001 | |
| 67784 chr11 manual_curation CDS 28843553 28843694 . + 2 Parent=GSCOCT00032428001 | |
| 67785 chr11 manual_curation CDS 28843162 28843241 . + 0 Parent=GSCOCT00032428001 | |
| 67786 chr11 manual_curation CDS 28841780 28841934 . + 1 Parent=GSCOCT00032428001 | |
| 67787 chr11 manual_curation CDS 28841563 28841653 . + 0 Parent=GSCOCT00032428001 | |
| 67788 chr11 manual_curation gene 28846380 28847381 . + . ID=GSCOCG00032426001;Name=Cc11_g11580 | |
| 67789 chr11 manual_curation mRNA 28846380 28847381 . + . ID=GSCOCT00032426001;Parent=GSCOCG00032426001;Name=Cc11_g11580 | |
| 67790 chr11 manual_curation polypeptide 28846380 28847381 . + . ID=GSCOCP00032426001;Dbxref=InterPro:IPR000863,PFAM:PF00685,SwissProt:P52839,SwissProt:Q8L5A7,SwissProt:Q9ZPQ5,TAIR:AT2G03760.1,TAIR:AT2G03770.1,TAIR:AT5G07010.1,TrEMBL:B9HWU7,TrEMBL:B9RE91,TrEMBL:F6HFY6;Derives_from=GSCOCT00032426001;Name=Cc11_g11580;Ontology_term=CC_evidence_code:ISS,GO:0008146,CC_EC_number:2.8.2.3,PRODUCT:Putative Cytosolic sulfotransferase 13,CC_functional_completeness:complete,CC_gene:SOT13,CC_gene:SOT15,CC_gene:SOT12;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032426001~ Putative Cytosolic sulfotransferase 13~ SOT13~ complete;original_location=complement(2495285..2496286);owner=coffea | |
| 67791 chr11 manual_curation exon 28846380 28847381 . + . Parent=GSCOCT00032426001 | |
| 67792 chr11 manual_curation CDS 28846380 28847381 . + 0 Parent=GSCOCT00032426001 | |
| 67793 chr11 manual_curation gene 28848534 28849559 . + . ID=GSCOCG00032425001;Name=Cc11_g11590 | |
| 67794 chr11 manual_curation mRNA 28848534 28849559 . + . ID=GSCOCT00032425001;Parent=GSCOCG00032425001;Name=Cc11_g11590 | |
| 67795 chr11 manual_curation polypeptide 28848534 28849559 . + . ID=GSCOCP00032425001;Dbxref=InterPro:IPR000863,PFAM:PF00685,SwissProt:P52839,SwissProt:Q9M1V2,SwissProt:Q9ZPQ5,TAIR:AT2G03760.1,TAIR:AT2G03770.1,TAIR:AT3G45070.1,TrEMBL:B9P614,TrEMBL:F6HFY6,TrEMBL:I1KX12;Derives_from=GSCOCT00032425001;Name=Cc11_g11590;Ontology_term=CC_evidence_code:ISS,GO:0008146,CC_EC_number:2.8.2.4,PRODUCT:Cytosolic sulfotransferase 13,CC_functional_completeness:complete,CC_gene:SOT13,CC_gene:SOT12,CC_gene:SOT5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032425001~ Cytosolic sulfotransferase 13~ SOT13~ complete;original_location=complement(2493107..2494132);owner=coffea | |
| 67796 chr11 manual_curation exon 28848534 28849559 . + . Parent=GSCOCT00032425001 | |
| 67797 chr11 manual_curation CDS 28848534 28849559 . + 0 Parent=GSCOCT00032425001 | |
| 67798 chr11 manual_curation gene 28867793 28871917 . + . ID=GSCOCG00032424001;Name=Cc11_g11600 | |
| 67799 chr11 manual_curation mRNA 28867793 28871917 . + . ID=GSCOCT00032424001;Parent=GSCOCG00032424001;Name=Cc11_g11600 | |
| 67800 chr11 manual_curation polypeptide 28868833 28871529 . + . ID=GSCOCP00032424001;Dbxref=InterPro:IPR002912,PFAM:PF01842,TAIR:AT1G69040.2,TAIR:AT2G03730.1,TAIR:AT3G01990.1,TrEMBL:B9HWU8,TrEMBL:B9RE92,TrEMBL:F6HF06;Derives_from=GSCOCT00032424001;Name=Cc11_g11600;Ontology_term=CC_evidence_code:ISS,GO:0008152,GO:0016597,CC_EC_number:missing_EC_number,PRODUCT:ACT domain repeat 4,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032424001~ ACT domain repeat 4~ unknown_gene~ complete;original_location=complement(join(2473752..2473833%2C2473579..2473648%2C2473432..2473477%2C2473229..2473343%2C2473068..2473135%2C2472387..2472980%2C2472157..2472261%2C2471137..2471478));owner=coffea | |
| 67801 chr11 manual_curation exon 28871188 28871917 . + . Parent=GSCOCT00032424001 | |
| 67802 chr11 manual_curation exon 28870405 28870509 . + . Parent=GSCOCT00032424001 | |
| 67803 chr11 manual_curation exon 28869686 28870279 . + . Parent=GSCOCT00032424001 | |
| 67804 chr11 manual_curation exon 28869531 28869598 . + . Parent=GSCOCT00032424001 | |
| 67805 chr11 manual_curation exon 28869323 28869437 . + . Parent=GSCOCT00032424001 | |
| 67806 chr11 manual_curation exon 28869189 28869234 . + . Parent=GSCOCT00032424001 | |
| 67807 chr11 manual_curation exon 28869018 28869087 . + . Parent=GSCOCT00032424001 | |
| 67808 chr11 manual_curation exon 28867793 28868914 . + . Parent=GSCOCT00032424001 | |
| 67809 chr11 manual_curation CDS 28871188 28871529 . + 0 Parent=GSCOCT00032424001 | |
| 67810 chr11 manual_curation CDS 28870405 28870509 . + 0 Parent=GSCOCT00032424001 | |
| 67811 chr11 manual_curation CDS 28869686 28870279 . + 0 Parent=GSCOCT00032424001 | |
| 67812 chr11 manual_curation CDS 28869531 28869598 . + 1 Parent=GSCOCT00032424001 | |
| 67813 chr11 manual_curation CDS 28869323 28869437 . + 0 Parent=GSCOCT00032424001 | |
| 67814 chr11 manual_curation CDS 28869189 28869234 . + 2 Parent=GSCOCT00032424001 | |
| 67815 chr11 manual_curation CDS 28869018 28869087 . + 1 Parent=GSCOCT00032424001 | |
| 67816 chr11 manual_curation CDS 28868833 28868914 . + 0 Parent=GSCOCT00032424001 | |
| 67817 chr11 manual_curation gene 28877494 28882097 . + . ID=GSCOCG00032422001;Name=Cc11_g11610 | |
| 67818 chr11 manual_curation mRNA 28877494 28882097 . + . ID=GSCOCT00032422001;Parent=GSCOCG00032422001;Name=Cc11_g11610 | |
| 67819 chr11 manual_curation polypeptide 28878634 28881855 . + . ID=GSCOCP00032422001;Dbxref=InterPro:IPR001623,PFAM:PF00226,PROFILE:PS50076,SUPERFAMILY:SSF46565,TAIR:AT1G69060.1,TrEMBL:B9HWV3,TrEMBL:F6HF05,TrEMBL:I1JEJ4;Derives_from=GSCOCT00032422001;Name=Cc11_g11610;Ontology_term=CC_evidence_code:ISS,GO:0031072,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032422001~ Putative Uncharacterized protein~ unknown_gene~ complete;original_location=complement(join(2462608..2464032%2C2462267..2462389%2C2461895..2462047%2C2460811..2460948));owner=coffea | |
| 67820 chr11 manual_curation exon 28877494 28877692 . + . Parent=GSCOCT00032422001 | |
| 67821 chr11 manual_curation exon 28881718 28882097 . + . Parent=GSCOCT00032422001 | |
| 67822 chr11 manual_curation exon 28880619 28880771 . + . Parent=GSCOCT00032422001 | |
| 67823 chr11 manual_curation exon 28880277 28880399 . + . Parent=GSCOCT00032422001 | |
| 67824 chr11 manual_curation exon 28878628 28880058 . + . Parent=GSCOCT00032422001 | |
| 67825 chr11 manual_curation CDS 28881718 28881855 . + 0 Parent=GSCOCT00032422001 | |
| 67826 chr11 manual_curation CDS 28880619 28880771 . + 0 Parent=GSCOCT00032422001 | |
| 67827 chr11 manual_curation CDS 28880277 28880399 . + 0 Parent=GSCOCT00032422001 | |
| 67828 chr11 manual_curation CDS 28878634 28880058 . + 0 Parent=GSCOCT00032422001 | |
| 67829 chr11 manual_curation gene 28882873 28891243 . - . ID=GSCOCG00032421001;Name=Cc11_g11620 | |
| 67830 chr11 manual_curation mRNA 28882873 28891243 . - . ID=GSCOCT00032421001;Parent=GSCOCG00032421001;Name=Cc11_g11620 | |
| 67831 chr11 manual_curation polypeptide 28882873 28891243 . - . ID=GSCOCP00032421001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:B9X287,SwissProt:O48786,SwissProt:Q6Z6D6,TAIR:AT2G26710.1,TAIR:AT2G46960.2,TAIR:AT3G14640.1,TrEMBL:A5AD13,TrEMBL:B9HWV4,TrEMBL:B9RE99;Derives_from=GSCOCT00032421001;Name=Cc11_g11620;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.3.3.9,PRODUCT:Putative Cytochrome P450 734A1,CC_functional_completeness:complete,CC_gene:CYP734A1,CC_gene:CYP734A2,CC_gene:CYP734A6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032421001~ Putative Cytochrome P450 734A1~ CYP734A1~ complete;original_location=join(2451423..2451696%2C2451830..2452053%2C2452152..2452384%2C2452561..2452921%2C2453161..2453571%2C2453939..2454097%2C2455142..2455267%2C2457618..2457670%2C2457694..2457989%2C2458226..2458449%2C2458542..2458774%2C2458860..2459238%2C2459365..2459793);owner=coffea | |
| 67832 chr11 manual_curation exon 28890970 28891243 . - . Parent=GSCOCT00032421001 | |
| 67833 chr11 manual_curation exon 28890613 28890836 . - . Parent=GSCOCT00032421001 | |
| 67834 chr11 manual_curation exon 28890282 28890514 . - . Parent=GSCOCT00032421001 | |
| 67835 chr11 manual_curation exon 28889745 28890105 . - . Parent=GSCOCT00032421001 | |
| 67836 chr11 manual_curation exon 28889095 28889505 . - . Parent=GSCOCT00032421001 | |
| 67837 chr11 manual_curation exon 28888569 28888727 . - . Parent=GSCOCT00032421001 | |
| 67838 chr11 manual_curation exon 28887399 28887524 . - . Parent=GSCOCT00032421001 | |
| 67839 chr11 manual_curation exon 28884996 28885048 . - . Parent=GSCOCT00032421001 | |
| 67840 chr11 manual_curation exon 28884677 28884972 . - . Parent=GSCOCT00032421001 | |
| 67841 chr11 manual_curation exon 28884217 28884440 . - . Parent=GSCOCT00032421001 | |
| 67842 chr11 manual_curation exon 28883892 28884124 . - . Parent=GSCOCT00032421001 | |
| 67843 chr11 manual_curation exon 28883428 28883806 . - . Parent=GSCOCT00032421001 | |
| 67844 chr11 manual_curation exon 28882873 28883301 . - . Parent=GSCOCT00032421001 | |
| 67845 chr11 manual_curation CDS 28890970 28891243 . - 0 Parent=GSCOCT00032421001 | |
| 67846 chr11 manual_curation CDS 28890613 28890836 . - 1 Parent=GSCOCT00032421001 | |
| 67847 chr11 manual_curation CDS 28890282 28890514 . - 0 Parent=GSCOCT00032421001 | |
| 67848 chr11 manual_curation CDS 28889745 28890105 . - 2 Parent=GSCOCT00032421001 | |
| 67849 chr11 manual_curation CDS 28889095 28889505 . - 0 Parent=GSCOCT00032421001 | |
| 67850 chr11 manual_curation CDS 28888569 28888727 . - 0 Parent=GSCOCT00032421001 | |
| 67851 chr11 manual_curation CDS 28887399 28887524 . - 0 Parent=GSCOCT00032421001 | |
| 67852 chr11 manual_curation CDS 28884996 28885048 . - 0 Parent=GSCOCT00032421001 | |
| 67853 chr11 manual_curation CDS 28884677 28884972 . - 2 Parent=GSCOCT00032421001 | |
| 67854 chr11 manual_curation CDS 28884217 28884440 . - 1 Parent=GSCOCT00032421001 | |
| 67855 chr11 manual_curation CDS 28883892 28884124 . - 0 Parent=GSCOCT00032421001 | |
| 67856 chr11 manual_curation CDS 28883428 28883806 . - 2 Parent=GSCOCT00032421001 | |
| 67857 chr11 manual_curation CDS 28882873 28883301 . - 0 Parent=GSCOCT00032421001 | |
| 67858 chr11 manual_curation gene 28893574 28895674 . - . ID=GSCOCG00032420001;Name=Cc11_g11630 | |
| 67859 chr11 manual_curation mRNA 28893574 28895674 . - . ID=GSCOCT00032420001;Parent=GSCOCG00032420001;Name=Cc11_g11630 | |
| 67860 chr11 manual_curation polypeptide 28893574 28895674 . - . ID=GSCOCP00032420001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00463,SUPERFAMILY:SSF48264,SwissProt:B9X287,SwissProt:O48786,SwissProt:Q69XM6,TAIR:AT2G26710.1,TAIR:AT3G14660.1,TAIR:AT3G14680.1,TrEMBL:B9HWV8,TrEMBL:B9REA1,TrEMBL:H2DH17;Derives_from=GSCOCT00032420001;Name=Cc11_g11630;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.3.3.9,PRODUCT:Putative Cytochrome P450 734A1,CC_functional_completeness:fragment,CC_gene:CYP734A1,CC_gene:CYP734A6,CC_gene:CYP734A4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032420001~ Putative Cytochrome P450 734A1~ CYP734A1~ fragment;original_location=join(2446992..2447173%2C2447229..2447325%2C2447410..2447490%2C2447750..2447856%2C2448330..2448542%2C2448615..2448699%2C2448817..2449092);owner=coffea | |
| 67861 chr11 manual_curation exon 28895493 28895674 . - . Parent=GSCOCT00032420001 | |
| 67862 chr11 manual_curation exon 28895341 28895437 . - . Parent=GSCOCT00032420001 | |
| 67863 chr11 manual_curation exon 28895176 28895256 . - . Parent=GSCOCT00032420001 | |
| 67864 chr11 manual_curation exon 28894810 28894916 . - . Parent=GSCOCT00032420001 | |
| 67865 chr11 manual_curation exon 28894124 28894336 . - . Parent=GSCOCT00032420001 | |
| 67866 chr11 manual_curation exon 28893967 28894051 . - . Parent=GSCOCT00032420001 | |
| 67867 chr11 manual_curation exon 28893574 28893849 . - . Parent=GSCOCT00032420001 | |
| 67868 chr11 manual_curation CDS 28895493 28895674 . - 0 Parent=GSCOCT00032420001 | |
| 67869 chr11 manual_curation CDS 28895341 28895437 . - 2 Parent=GSCOCT00032420001 | |
| 67870 chr11 manual_curation CDS 28895176 28895256 . - 0 Parent=GSCOCT00032420001 | |
| 67871 chr11 manual_curation CDS 28894810 28894916 . - 0 Parent=GSCOCT00032420001 | |
| 67872 chr11 manual_curation CDS 28894124 28894336 . - 2 Parent=GSCOCT00032420001 | |
| 67873 chr11 manual_curation CDS 28893967 28894051 . - 2 Parent=GSCOCT00032420001 | |
| 67874 chr11 manual_curation CDS 28893574 28893849 . - 0 Parent=GSCOCT00032420001 | |
| 67875 chr11 manual_curation gene 28898077 28900261 . + . ID=GSCOCG00032419001;Name=Cc11_g11640 | |
| 67876 chr11 manual_curation mRNA 28898077 28900261 . + . ID=GSCOCT00032419001;Parent=GSCOCG00032419001;Name=Cc11_g11640 | |
| 67877 chr11 manual_curation polypeptide 28898077 28900261 . + . ID=GSCOCP00032419001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:B9X287,SwissProt:O48786,SwissProt:Q6Z6D6,TAIR:AT2G26710.1,TAIR:AT3G14640.1,TAIR:AT3G14680.1,TrEMBL:B9HWV8,TrEMBL:B9RE99,TrEMBL:H2DH17;Derives_from=GSCOCT00032419001;Name=Cc11_g11640;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.3.3.9,PRODUCT:Putative Cytochrome P450 734A1,CC_functional_completeness:complete,CC_gene:CYP734A1,CC_gene:CYP734A6,CC_gene:CYP734A2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032419001~ Putative Cytochrome P450 734A1~ CYP734A1~ complete;original_location=complement(join(2444307..2444589%2C2443909..2444132%2C2443528..2443760%2C2442960..2443335%2C2442405..2442836));owner=coffea | |
| 67878 chr11 manual_curation exon 28899830 28900261 . + . Parent=GSCOCT00032419001 | |
| 67879 chr11 manual_curation exon 28899331 28899706 . + . Parent=GSCOCT00032419001 | |
| 67880 chr11 manual_curation exon 28898906 28899138 . + . Parent=GSCOCT00032419001 | |
| 67881 chr11 manual_curation exon 28898534 28898757 . + . Parent=GSCOCT00032419001 | |
| 67882 chr11 manual_curation exon 28898077 28898359 . + . Parent=GSCOCT00032419001 | |
| 67883 chr11 manual_curation CDS 28899830 28900261 . + 0 Parent=GSCOCT00032419001 | |
| 67884 chr11 manual_curation CDS 28899331 28899706 . + 2 Parent=GSCOCT00032419001 | |
| 67885 chr11 manual_curation CDS 28898906 28899138 . + 0 Parent=GSCOCT00032419001 | |
| 67886 chr11 manual_curation CDS 28898534 28898757 . + 1 Parent=GSCOCT00032419001 | |
| 67887 chr11 manual_curation CDS 28898077 28898359 . + 0 Parent=GSCOCT00032419001 | |
| 67888 chr11 manual_curation gene 28902584 28904403 . + . ID=GSCOCG00032418001;Name=Cc11_g11650 | |
| 67889 chr11 manual_curation mRNA 28902584 28904403 . + . ID=GSCOCT00032418001;Parent=GSCOCG00032418001;Name=Cc11_g11650 | |
| 67890 chr11 manual_curation polypeptide 28902584 28904403 . + . ID=GSCOCP00032418001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:B9X287,SwissProt:O48786,SwissProt:Q05047,TAIR:AT2G26710.1,TAIR:AT3G14620.1,TAIR:AT3G14640.1,TrEMBL:B9HWV4,TrEMBL:B9HWV8,TrEMBL:B9RE98;Derives_from=GSCOCT00032418001;Name=Cc11_g11650;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.3.3.9,PRODUCT:Putative Cytochrome P450 734A1,CC_functional_completeness:complete,CC_gene:CYP734A1,CC_gene:CYP72A1,CC_gene:CYP734A6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032418001~ Putative Cytochrome P450 734A1~ CYP734A1~ complete;original_location=complement(join(2440010..2440082%2C2439674..2439897%2C2439348..2439580%2C2438787..2439156%2C2438263..2438691));owner=coffea | |
| 67891 chr11 manual_curation exon 28903975 28904403 . + . Parent=GSCOCT00032418001 | |
| 67892 chr11 manual_curation exon 28903510 28903879 . + . Parent=GSCOCT00032418001 | |
| 67893 chr11 manual_curation exon 28903086 28903318 . + . Parent=GSCOCT00032418001 | |
| 67894 chr11 manual_curation exon 28902769 28902992 . + . Parent=GSCOCT00032418001 | |
| 67895 chr11 manual_curation exon 28902584 28902656 . + . Parent=GSCOCT00032418001 | |
| 67896 chr11 manual_curation CDS 28903975 28904403 . + 0 Parent=GSCOCT00032418001 | |
| 67897 chr11 manual_curation CDS 28903510 28903879 . + 2 Parent=GSCOCT00032418001 | |
| 67898 chr11 manual_curation CDS 28903086 28903318 . + 0 Parent=GSCOCT00032418001 | |
| 67899 chr11 manual_curation CDS 28902769 28902992 . + 1 Parent=GSCOCT00032418001 | |
| 67900 chr11 manual_curation CDS 28902584 28902656 . + 0 Parent=GSCOCT00032418001 | |
| 67901 chr11 manual_curation gene 28905253 28907121 . - . ID=GSCOCG00032417001;Name=Cc11_g11660 | |
| 67902 chr11 manual_curation mRNA 28905253 28907121 . - . ID=GSCOCT00032417001;Parent=GSCOCG00032417001;Name=Cc11_g11660 | |
| 67903 chr11 manual_curation polypeptide 28905940 28906401 . - . ID=GSCOCP00032417001;Dbxref=TrEMBL:A5AVS0,TrEMBL:F6HF04;Derives_from=GSCOCT00032417001;Name=Cc11_g11660;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032417001~ Putative uncharacterized protein~ unknown_gene~ modules;original_location=2436265..2436726;owner=coffea | |
| 67904 chr11 manual_curation exon 28905253 28907121 . - . Parent=GSCOCT00032417001 | |
| 67905 chr11 manual_curation CDS 28905940 28906401 . - 0 Parent=GSCOCT00032417001 | |
| 67906 chr11 manual_curation gene 28908197 28909194 . - . ID=GSCOCG00032416001;Name=Cc11_g11670 | |
| 67907 chr11 manual_curation mRNA 28908197 28909194 . - . ID=GSCOCT00032416001;Parent=GSCOCG00032416001;Name=Cc11_g11670 | |
| 67908 chr11 manual_curation polypeptide 28908529 28908864 . - . ID=GSCOCP00032416001;Dbxref=TrEMBL:A5AVS0,TrEMBL:F6HF04;Derives_from=GSCOCT00032416001;Name=Cc11_g11670;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032416001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=2433802..2434137;owner=coffea | |
| 67909 chr11 manual_curation exon 28908197 28909194 . - . Parent=GSCOCT00032416001 | |
| 67910 chr11 manual_curation CDS 28908529 28908864 . - 0 Parent=GSCOCT00032416001 | |
| 67911 chr11 manual_curation gene 28913881 28914810 . - . ID=GSCOCG00032413001;Name=Cc11_g11680 | |
| 67912 chr11 manual_curation mRNA 28913881 28914810 . - . ID=GSCOCT00032413001;Parent=GSCOCG00032413001;Name=Cc11_g11680 | |
| 67913 chr11 manual_curation polypeptide 28914281 28914640 . - . ID=GSCOCP00032413001;Dbxref=TrEMBL:A5AVS0,TrEMBL:F6HF04;Derives_from=GSCOCT00032413001;Name=Cc11_g11680;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032413001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=2428026..2428385;owner=coffea | |
| 67914 chr11 manual_curation exon 28913881 28914810 . - . Parent=GSCOCT00032413001 | |
| 67915 chr11 manual_curation CDS 28914281 28914640 . - 0 Parent=GSCOCT00032413001 | |
| 67916 chr11 manual_curation gene 28916069 28923784 . - . ID=GSCOCG00032412001;Name=Cc11_g11690 | |
| 67917 chr11 manual_curation mRNA 28916069 28923784 . - . ID=GSCOCT00032412001;Parent=GSCOCG00032412001;Name=Cc11_g11690 | |
| 67918 chr11 manual_curation polypeptide 28916774 28923605 . - . ID=GSCOCP00032412001;Dbxref=InterPro:IPR007276,PANTHER:PTHR23183,PFAM:PF04147,SwissProt:O43051,SwissProt:P78316,SwissProt:Q8R3N1,TAIR:AT1G69070.1,TrEMBL:B9RUI4,TrEMBL:F6HF03,TrEMBL:I1JB61;Derives_from=GSCOCT00032412001;Name=Cc11_g11690;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Nucleolar protein 14,CC_functional_completeness:complete,CC_gene:NOP14,CC_gene:Nop14,CC_gene:nop14;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032412001~ Putative Nucleolar protein 14~ NOP14~ complete;original_location=join(2419061..2419192%2C2419347..2419481%2C2419622..2419778%2C2420756..2420835%2C2421294..2421353%2C2421441..2421653%2C2421929..2422057%2C2422733..2423371%2C2423726..2423918%2C2424049..2424242%2C2424375..2424479%2C2424756..2424895%2C2425253..2425531%2C2425628..2425892);owner=coffea | |
| 67919 chr11 manual_curation exon 28916069 28916486 . - . Parent=GSCOCT00032412001 | |
| 67920 chr11 manual_curation exon 28923474 28923784 . - . Parent=GSCOCT00032412001 | |
| 67921 chr11 manual_curation exon 28923185 28923319 . - . Parent=GSCOCT00032412001 | |
| 67922 chr11 manual_curation exon 28922888 28923044 . - . Parent=GSCOCT00032412001 | |
| 67923 chr11 manual_curation exon 28921831 28921910 . - . Parent=GSCOCT00032412001 | |
| 67924 chr11 manual_curation exon 28921313 28921372 . - . Parent=GSCOCT00032412001 | |
| 67925 chr11 manual_curation exon 28921013 28921225 . - . Parent=GSCOCT00032412001 | |
| 67926 chr11 manual_curation exon 28920609 28920737 . - . Parent=GSCOCT00032412001 | |
| 67927 chr11 manual_curation exon 28919295 28919933 . - . Parent=GSCOCT00032412001 | |
| 67928 chr11 manual_curation exon 28918748 28918940 . - . Parent=GSCOCT00032412001 | |
| 67929 chr11 manual_curation exon 28918424 28918617 . - . Parent=GSCOCT00032412001 | |
| 67930 chr11 manual_curation exon 28918187 28918291 . - . Parent=GSCOCT00032412001 | |
| 67931 chr11 manual_curation exon 28917771 28917910 . - . Parent=GSCOCT00032412001 | |
| 67932 chr11 manual_curation exon 28917135 28917413 . - . Parent=GSCOCT00032412001 | |
| 67933 chr11 manual_curation exon 28916728 28917038 . - . Parent=GSCOCT00032412001 | |
| 67934 chr11 manual_curation CDS 28923474 28923605 . - 0 Parent=GSCOCT00032412001 | |
| 67935 chr11 manual_curation CDS 28923185 28923319 . - 0 Parent=GSCOCT00032412001 | |
| 67936 chr11 manual_curation CDS 28922888 28923044 . - 0 Parent=GSCOCT00032412001 | |
| 67937 chr11 manual_curation CDS 28921831 28921910 . - 1 Parent=GSCOCT00032412001 | |
| 67938 chr11 manual_curation CDS 28921313 28921372 . - 0 Parent=GSCOCT00032412001 | |
| 67939 chr11 manual_curation CDS 28921013 28921225 . - 0 Parent=GSCOCT00032412001 | |
| 67940 chr11 manual_curation CDS 28920609 28920737 . - 0 Parent=GSCOCT00032412001 | |
| 67941 chr11 manual_curation CDS 28919295 28919933 . - 0 Parent=GSCOCT00032412001 | |
| 67942 chr11 manual_curation CDS 28918748 28918940 . - 0 Parent=GSCOCT00032412001 | |
| 67943 chr11 manual_curation CDS 28918424 28918617 . - 1 Parent=GSCOCT00032412001 | |
| 67944 chr11 manual_curation CDS 28918187 28918291 . - 0 Parent=GSCOCT00032412001 | |
| 67945 chr11 manual_curation CDS 28917771 28917910 . - 0 Parent=GSCOCT00032412001 | |
| 67946 chr11 manual_curation CDS 28917135 28917413 . - 2 Parent=GSCOCT00032412001 | |
| 67947 chr11 manual_curation CDS 28916774 28917038 . - 2 Parent=GSCOCT00032412001 | |
| 67948 chr11 manual_curation gene 28930516 28933712 . + . ID=GSCOCG00032411001;Name=Cc11_g11700 | |
| 67949 chr11 manual_curation mRNA 28930516 28933712 . + . ID=GSCOCT00032411001;Parent=GSCOCG00032411001;Name=Cc11_g11700 | |
| 67950 chr11 manual_curation polypeptide 28930516 28933488 . + . ID=GSCOCP00032411001;Dbxref=InterPro:IPR001841,InterPro:IPR018957,PFAM:PF00097,PROFILE:PS50089,SMART:SM00184,SwissProt:Q8LE94,TAIR:AT3G02290.1,TAIR:AT5G15790.1,TAIR:AT5G38895.3,TrEMBL:B9SIV4,TrEMBL:F4KCY7,TrEMBL:Q1KUY5;Derives_from=GSCOCT00032411001;Name=Cc11_g11700;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative E3 ubiquitin-protein ligase At3g02290,CC_functional_completeness:complete,CC_gene:At3g02290;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032411001~ Putative E3 ubiquitin-protein ligase At3g02290~ At3g02290~ complete;original_location=complement(join(2412031..2412150%2C2410441..2410834%2C2410129..2410238%2C2409178..2409201));owner=coffea | |
| 67951 chr11 manual_curation exon 28933465 28933712 . + . Parent=GSCOCT00032411001 | |
| 67952 chr11 manual_curation exon 28932428 28932537 . + . Parent=GSCOCT00032411001 | |
| 67953 chr11 manual_curation exon 28931832 28932225 . + . Parent=GSCOCT00032411001 | |
| 67954 chr11 manual_curation exon 28930516 28930635 . + . Parent=GSCOCT00032411001 | |
| 67955 chr11 manual_curation CDS 28933465 28933488 . + 0 Parent=GSCOCT00032411001 | |
| 67956 chr11 manual_curation CDS 28932428 28932537 . + 1 Parent=GSCOCT00032411001 | |
| 67957 chr11 manual_curation CDS 28931832 28932225 . + 0 Parent=GSCOCT00032411001 | |
| 67958 chr11 manual_curation CDS 28930516 28930635 . + 0 Parent=GSCOCT00032411001 | |
| 67959 chr11 manual_curation gene 28935502 28940657 . - . ID=GSCOCG00032410001;Name=Cc11_g11710 | |
| 67960 chr11 manual_curation mRNA 28935502 28940657 . - . ID=GSCOCT00032410001;Parent=GSCOCG00032410001;Name=Cc11_g11710 | |
| 67961 chr11 manual_curation polypeptide 28935648 28940533 . - . ID=GSCOCP00032410001;Dbxref=InterPro:IPR002100,InterPro:IPR002487,PFAM:PF00319,PFAM:PF01486,PRINTS:PR00404,PROFILE:PS50066,PROFILE:PS51297,PROSITE:PS00350,SMART:SM00432,SUPERFAMILY:SSF55455,SwissProt:D7KWY6,SwissProt:P0DI14,SwissProt:Q41276,TAIR:AT1G26310.1,TAIR:AT1G69120.1,TAIR:AT5G60910.1,TrEMBL:B5LWQ6,TrEMBL:I1MMB6,TrEMBL:Q39399;Derives_from=GSCOCT00032410001;Name=Cc11_g11710;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0005634,GO:0043565,CC_EC_number:missing_EC_number,PRODUCT:Floral homeotic protein APETALA 1,CC_functional_completeness:complete,CC_gene:AP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032410001~ Floral homeotic protein APETALA 1~ AP1~ complete;original_location=join(2402133..2402317%2C2404686..2404764%2C2404964..2405028%2C2405157..2405256%2C2405373..2405414%2C2406081..2406122%2C2406441..2406556%2C2406919..2407018);owner=coffea | |
| 67962 chr11 manual_curation exon 28940349 28940657 . - . Parent=GSCOCT00032410001 | |
| 67963 chr11 manual_curation exon 28937902 28937980 . - . Parent=GSCOCT00032410001 | |
| 67964 chr11 manual_curation exon 28937638 28937702 . - . Parent=GSCOCT00032410001 | |
| 67965 chr11 manual_curation exon 28937410 28937509 . - . Parent=GSCOCT00032410001 | |
| 67966 chr11 manual_curation exon 28937252 28937293 . - . Parent=GSCOCT00032410001 | |
| 67967 chr11 manual_curation exon 28936544 28936585 . - . Parent=GSCOCT00032410001 | |
| 67968 chr11 manual_curation exon 28936110 28936225 . - . Parent=GSCOCT00032410001 | |
| 67969 chr11 manual_curation exon 28935502 28935747 . - . Parent=GSCOCT00032410001 | |
| 67970 chr11 manual_curation CDS 28940349 28940533 . - 0 Parent=GSCOCT00032410001 | |
| 67971 chr11 manual_curation CDS 28937902 28937980 . - 2 Parent=GSCOCT00032410001 | |
| 67972 chr11 manual_curation CDS 28937638 28937702 . - 0 Parent=GSCOCT00032410001 | |
| 67973 chr11 manual_curation CDS 28937410 28937509 . - 2 Parent=GSCOCT00032410001 | |
| 67974 chr11 manual_curation CDS 28937252 28937293 . - 0 Parent=GSCOCT00032410001 | |
| 67975 chr11 manual_curation CDS 28936544 28936585 . - 0 Parent=GSCOCT00032410001 | |
| 67976 chr11 manual_curation CDS 28936110 28936225 . - 0 Parent=GSCOCT00032410001 | |
| 67977 chr11 manual_curation CDS 28935648 28935747 . - 2 Parent=GSCOCT00032410001 | |
| 67978 chr11 manual_curation gene 28945021 28951518 . - . ID=GSCOCG00032409001;Name=Cc11_g11720 | |
| 67979 chr11 manual_curation mRNA 28945021 28951518 . - . ID=GSCOCT00032409001;Parent=GSCOCG00032409001;Name=Cc11_g11720 | |
| 67980 chr11 manual_curation polypeptide 28945246 28951240 . - . ID=GSCOCP00032409001;Dbxref=InterPro:IPR002100,InterPro:IPR002487,PFAM:PF00319,PFAM:PF01486,PRINTS:PR00404,PROFILE:PS50066,PROFILE:PS51297,PROSITE:PS00350,SMART:SM00432,SUPERFAMILY:SSF55455,SwissProt:P29383,SwissProt:Q38694,SwissProt:Q39685,TAIR:AT2G03710.1,TAIR:AT3G02310.1,TAIR:AT5G15800.2,TrEMBL:E9JPX5,TrEMBL:Q8L5F3,TrEMBL:Q8S4L4;Derives_from=GSCOCT00032409001;Name=Cc11_g11720;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0005634,GO:0043565,CC_EC_number:missing_EC_number,PRODUCT:MADS-box protein CMB1,CC_functional_completeness:complete,CC_gene:CMB1,CC_gene:AGL3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032409001~ MADS-box protein CMB1~ CMB1~ complete;original_location=join(2391426..2391610%2C2395045..2395123%2C2395544..2395605%2C2396179..2396278%2C2396745..2396786%2C2396859..2396900%2C2397021..2397151%2C2397342..2397420);owner=coffea | |
| 67981 chr11 manual_curation exon 28951056 28951518 . - . Parent=GSCOCT00032409001 | |
| 67982 chr11 manual_curation exon 28947543 28947621 . - . Parent=GSCOCT00032409001 | |
| 67983 chr11 manual_curation exon 28947061 28947122 . - . Parent=GSCOCT00032409001 | |
| 67984 chr11 manual_curation exon 28946388 28946487 . - . Parent=GSCOCT00032409001 | |
| 67985 chr11 manual_curation exon 28945880 28945921 . - . Parent=GSCOCT00032409001 | |
| 67986 chr11 manual_curation exon 28945766 28945807 . - . Parent=GSCOCT00032409001 | |
| 67987 chr11 manual_curation exon 28945515 28945645 . - . Parent=GSCOCT00032409001 | |
| 67988 chr11 manual_curation exon 28945021 28945324 . - . Parent=GSCOCT00032409001 | |
| 67989 chr11 manual_curation CDS 28951056 28951240 . - 0 Parent=GSCOCT00032409001 | |
| 67990 chr11 manual_curation CDS 28947543 28947621 . - 2 Parent=GSCOCT00032409001 | |
| 67991 chr11 manual_curation CDS 28947061 28947122 . - 0 Parent=GSCOCT00032409001 | |
| 67992 chr11 manual_curation CDS 28946388 28946487 . - 2 Parent=GSCOCT00032409001 | |
| 67993 chr11 manual_curation CDS 28945880 28945921 . - 0 Parent=GSCOCT00032409001 | |
| 67994 chr11 manual_curation CDS 28945766 28945807 . - 0 Parent=GSCOCT00032409001 | |
| 67995 chr11 manual_curation CDS 28945515 28945645 . - 0 Parent=GSCOCT00032409001 | |
| 67996 chr11 manual_curation CDS 28945246 28945324 . - 2 Parent=GSCOCT00032409001 | |
| 67997 chr11 manual_curation gene 28963359 28964387 . + . ID=GSCOCG00032407001;Name=Cc11_g11730 | |
| 67998 chr11 manual_curation mRNA 28963359 28964387 . + . ID=GSCOCT00032407001;Parent=GSCOCG00032407001;Name=Cc11_g11730 | |
| 67999 chr11 manual_curation polypeptide 28963359 28964387 . + . ID=GSCOCP00032407001;Dbxref=TAIR:AT1G69160.1,TrEMBL:B9HXH6,TrEMBL:B9REB4,TrEMBL:F6HF00;Derives_from=GSCOCT00032407001;Name=Cc11_g11730;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032407001~ Putative unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13980.1)%3B Has 173 Blast hits to 172 proteins in 54 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 25%3B Fungi - 33%3B Plants - 84%3B Viruses - 2%3B Other Eukaryotes - 29 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(2378690..2379307%2C2378279..2378608));owner=coffea | |
| 68000 chr11 manual_curation exon 28964058 28964387 . + . Parent=GSCOCT00032407001 | |
| 68001 chr11 manual_curation exon 28963359 28963976 . + . Parent=GSCOCT00032407001 | |
| 68002 chr11 manual_curation CDS 28964058 28964387 . + 0 Parent=GSCOCT00032407001 | |
| 68003 chr11 manual_curation CDS 28963359 28963976 . + 0 Parent=GSCOCT00032407001 | |
| 68004 chr11 manual_curation gene 28970584 28974679 . + . ID=GSCOCG00032406001;Name=Cc11_g11740 | |
| 68005 chr11 manual_curation mRNA 28970584 28974679 . + . ID=GSCOCT00032406001;Parent=GSCOCG00032406001;Name=Cc11_g11740 | |
| 68006 chr11 manual_curation polypeptide 28971498 28974241 . + . ID=GSCOCP00032406001;Dbxref=GENE3D:G3DSA:4.10.1100.10,InterPro:IPR004333,PFAM:PF03110,PROFILE:PS51141,SUPERFAMILY:SSF103612,SwissProt:A3A2Z8,SwissProt:Q8S9L0,SwissProt:Q94JW8,TAIR:AT1G27370.1,TAIR:AT1G69170.1,TAIR:AT5G50670.1,TrEMBL:B9HXH7,TrEMBL:B9REB5,TrEMBL:F6HEZ9;Derives_from=GSCOCT00032406001;Name=Cc11_g11740;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0005634,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:SPL6,CC_gene:SPL10,CC_gene:SPL3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032406001~ Putative uncharacterized protein~ SPL6~ complete;original_location=complement(join(2370636..2371168%2C2370055..2370158%2C2368425..2369143));owner=coffea | |
| 68007 chr11 manual_curation exon 28970584 28970785 . + . Parent=GSCOCT00032406001 | |
| 68008 chr11 manual_curation exon 28973523 28974679 . + . Parent=GSCOCT00032406001 | |
| 68009 chr11 manual_curation exon 28972508 28972611 . + . Parent=GSCOCT00032406001 | |
| 68010 chr11 manual_curation exon 28971336 28972030 . + . Parent=GSCOCT00032406001 | |
| 68011 chr11 manual_curation CDS 28973523 28974241 . + 1 Parent=GSCOCT00032406001 | |
| 68012 chr11 manual_curation CDS 28972508 28972611 . + 2 Parent=GSCOCT00032406001 | |
| 68013 chr11 manual_curation CDS 28971498 28972030 . + 0 Parent=GSCOCT00032406001 | |
| 68014 chr11 manual_curation gene 28977384 28979193 . - . ID=GSCOCG00032405001;Name=Cc11_g11750 | |
| 68015 chr11 manual_curation mRNA 28977384 28979193 . - . ID=GSCOCT00032405001;Parent=GSCOCG00032405001;Name=Cc11_g11750 | |
| 68016 chr11 manual_curation polypeptide 28977384 28979193 . - . ID=GSCOCP00032405001;Dbxref=InterPro:IPR006780,InterPro:IPR009071,PFAM:PF04690,SUPERFAMILY:SSF47095,SwissProt:Q76EJ0,SwissProt:Q8GW46,SwissProt:Q8L925,TAIR:AT1G08465.1,TAIR:AT1G69180.1,TAIR:AT2G26580.1,TrEMBL:B9REB6,TrEMBL:D7T9Z4,TrEMBL:Q5EMN3;Derives_from=GSCOCT00032405001;Name=Cc11_g11750;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein DROOPING LEAF,CC_functional_completeness:fragment,CC_gene:DL,CC_gene:CRC,CC_gene:YAB5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032405001~ Protein DROOPING LEAF~ DL~ fragment;original_location=join(2363473..2363541%2C2364321..2364455%2C2364619..2364715%2C2364852..2364900%2C2365032..2365107%2C2365190..2365282);owner=coffea | |
| 68017 chr11 manual_curation exon 28979125 28979193 . - . Parent=GSCOCT00032405001 | |
| 68018 chr11 manual_curation exon 28978211 28978345 . - . Parent=GSCOCT00032405001 | |
| 68019 chr11 manual_curation exon 28977951 28978047 . - . Parent=GSCOCT00032405001 | |
| 68020 chr11 manual_curation exon 28977766 28977814 . - . Parent=GSCOCT00032405001 | |
| 68021 chr11 manual_curation exon 28977559 28977634 . - . Parent=GSCOCT00032405001 | |
| 68022 chr11 manual_curation exon 28977384 28977476 . - . Parent=GSCOCT00032405001 | |
| 68023 chr11 manual_curation CDS 28979125 28979193 . - 0 Parent=GSCOCT00032405001 | |
| 68024 chr11 manual_curation CDS 28978211 28978345 . - 0 Parent=GSCOCT00032405001 | |
| 68025 chr11 manual_curation CDS 28977951 28978047 . - 0 Parent=GSCOCT00032405001 | |
| 68026 chr11 manual_curation CDS 28977766 28977814 . - 1 Parent=GSCOCT00032405001 | |
| 68027 chr11 manual_curation CDS 28977559 28977634 . - 2 Parent=GSCOCT00032405001 | |
| 68028 chr11 manual_curation CDS 28977384 28977476 . - 0 Parent=GSCOCT00032405001 | |
| 68029 chr11 manual_curation gene 28985957 28993940 . + . ID=GSCOCG00032404001;Name=Cc11_g11760 | |
| 68030 chr11 manual_curation mRNA 28985957 28993940 . + . ID=GSCOCT00032404001;Parent=GSCOCG00032404001;Name=Cc11_g11760 | |
| 68031 chr11 manual_curation polypeptide 28985957 28993721 . + . ID=GSCOCP00032404001;Dbxref=InterPro:IPR003889,InterPro:IPR011046,PFAM:PF05965,SUPERFAMILY:SSF50978,TAIR:AT1G26330.2,TrEMBL:B9HIG3,TrEMBL:B9REB7,TrEMBL:D7T9Z3;Derives_from=GSCOCT00032404001;Name=Cc11_g11760;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0005634,CC_EC_number:missing_EC_number,PRODUCT:Putative DNA binding,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032404001~ Putative DNA binding~ unknown_gene~ fragment;original_location=complement(join(2356608..2356709%2C2355439..2355546%2C2355202..2355336%2C2354393..2354986%2C2354014..2354149%2C2353538..2353910%2C2352962..2353374%2C2352610..2352822%2C2352123..2352523%2C2351944..2352029%2C2351639..2351857%2C2350963..2351091%2C2350087..2350452%2C2349237..2349352%2C2348945..2349042));owner=coffea | |
| 68032 chr11 manual_curation exon 28993624 28993940 . + . Parent=GSCOCT00032404001 | |
| 68033 chr11 manual_curation exon 28993314 28993429 . + . Parent=GSCOCT00032404001 | |
| 68034 chr11 manual_curation exon 28992214 28992579 . + . Parent=GSCOCT00032404001 | |
| 68035 chr11 manual_curation exon 28991575 28991703 . + . Parent=GSCOCT00032404001 | |
| 68036 chr11 manual_curation exon 28990809 28991027 . + . Parent=GSCOCT00032404001 | |
| 68037 chr11 manual_curation exon 28990637 28990722 . + . Parent=GSCOCT00032404001 | |
| 68038 chr11 manual_curation exon 28990143 28990543 . + . Parent=GSCOCT00032404001 | |
| 68039 chr11 manual_curation exon 28989844 28990056 . + . Parent=GSCOCT00032404001 | |
| 68040 chr11 manual_curation exon 28989292 28989704 . + . Parent=GSCOCT00032404001 | |
| 68041 chr11 manual_curation exon 28988756 28989128 . + . Parent=GSCOCT00032404001 | |
| 68042 chr11 manual_curation exon 28988517 28988652 . + . Parent=GSCOCT00032404001 | |
| 68043 chr11 manual_curation exon 28987680 28988273 . + . Parent=GSCOCT00032404001 | |
| 68044 chr11 manual_curation exon 28987330 28987464 . + . Parent=GSCOCT00032404001 | |
| 68045 chr11 manual_curation exon 28987120 28987227 . + . Parent=GSCOCT00032404001 | |
| 68046 chr11 manual_curation exon 28985957 28986058 . + . Parent=GSCOCT00032404001 | |
| 68047 chr11 manual_curation CDS 28993624 28993721 . + 1 Parent=GSCOCT00032404001 | |
| 68048 chr11 manual_curation CDS 28993314 28993429 . + 2 Parent=GSCOCT00032404001 | |
| 68049 chr11 manual_curation CDS 28992214 28992579 . + 2 Parent=GSCOCT00032404001 | |
| 68050 chr11 manual_curation CDS 28991575 28991703 . + 2 Parent=GSCOCT00032404001 | |
| 68051 chr11 manual_curation CDS 28990809 28991027 . + 2 Parent=GSCOCT00032404001 | |
| 68052 chr11 manual_curation CDS 28990637 28990722 . + 0 Parent=GSCOCT00032404001 | |
| 68053 chr11 manual_curation CDS 28990143 28990543 . + 1 Parent=GSCOCT00032404001 | |
| 68054 chr11 manual_curation CDS 28989844 28990056 . + 1 Parent=GSCOCT00032404001 | |
| 68055 chr11 manual_curation CDS 28989292 28989704 . + 2 Parent=GSCOCT00032404001 | |
| 68056 chr11 manual_curation CDS 28988756 28989128 . + 1 Parent=GSCOCT00032404001 | |
| 68057 chr11 manual_curation CDS 28988517 28988652 . + 0 Parent=GSCOCT00032404001 | |
| 68058 chr11 manual_curation CDS 28987680 28988273 . + 0 Parent=GSCOCT00032404001 | |
| 68059 chr11 manual_curation CDS 28987330 28987464 . + 0 Parent=GSCOCT00032404001 | |
| 68060 chr11 manual_curation CDS 28987120 28987227 . + 0 Parent=GSCOCT00032404001 | |
| 68061 chr11 manual_curation CDS 28985957 28986058 . + 0 Parent=GSCOCT00032404001 | |
| 68062 chr11 manual_curation gene 28994420 28997839 . - . ID=GSCOCG00032403001;Name=Cc11_g11770 | |
| 68063 chr11 manual_curation mRNA 28994420 28997839 . - . ID=GSCOCT00032403001;Parent=GSCOCG00032403001;Name=Cc11_g11770 | |
| 68064 chr11 manual_curation polypeptide 28994689 28997386 . - . ID=GSCOCP00032403001;Dbxref=InterPro:IPR004901,PFAM:PF03214,SwissProt:O04300,SwissProt:Q8RU27,TAIR:AT3G02230.1,TAIR:AT3G08900.1,TAIR:AT5G15650.1,TrEMBL:F6HEZ8,TrEMBL:Q0PW29;Derives_from=GSCOCT00032403001;Name=Cc11_g11770;Ontology_term=CC_evidence_code:ISS,GO:0005794,GO:0007047,GO:0008466,GO:0009505,GO:0030054,GO:0030244,CC_EC_number:2.4.1.112,PRODUCT:Alpha-1%2C4-glucan-protein synthase [UDP-forming] 2,CC_functional_completeness:fragment,CC_gene:UPTG2,CC_gene:UPTG1,CC_gene:UPTG;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032403001~ Alpha-1%2C4-glucan-protein synthase [UDP-forming] 2~ UPTG2~ fragment;original_location=join(2345280..2345327%2C2346531..2346781%2C2346864..2347032%2C2347636..2347977);owner=coffea | |
| 68065 chr11 manual_curation exon 28997339 28997839 . - . Parent=GSCOCT00032403001 | |
| 68066 chr11 manual_curation exon 28995885 28996135 . - . Parent=GSCOCT00032403001 | |
| 68067 chr11 manual_curation exon 28995634 28995802 . - . Parent=GSCOCT00032403001 | |
| 68068 chr11 manual_curation exon 28994420 28995030 . - . Parent=GSCOCT00032403001 | |
| 68069 chr11 manual_curation CDS 28997339 28997386 . - 0 Parent=GSCOCT00032403001 | |
| 68070 chr11 manual_curation CDS 28995885 28996135 . - 0 Parent=GSCOCT00032403001 | |
| 68071 chr11 manual_curation CDS 28995634 28995802 . - 2 Parent=GSCOCT00032403001 | |
| 68072 chr11 manual_curation CDS 28994689 28995030 . - 0 Parent=GSCOCT00032403001 | |
| 68073 chr11 manual_curation gene 29029039 29032130 . - . ID=GSCOCG00032400001;Name=Cc11_g11780 | |
| 68074 chr11 manual_curation mRNA 29029039 29032130 . - . ID=GSCOCT00032400001;Parent=GSCOCG00032400001;Name=Cc11_g11780 | |
| 68075 chr11 manual_curation polypeptide 29029039 29032130 . - . ID=GSCOCP00032400001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002403,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00465,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:Q43147,SwissProt:Q50LE0,SwissProt:Q69F95,TAIR:AT3G30180.1,TAIR:AT5G05690.1,TAIR:AT5G38970.1,TrEMBL:A5APP2,TrEMBL:D7T9Y8,TrEMBL:Q2MZW1;Derives_from=GSCOCT00032400001;Name=Cc11_g11780;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,CC_EC_number:1.14.13.79,PRODUCT:Cytochrome P450 85A,CC_functional_completeness:complete,CC_gene:BA13,CC_gene:CYP85A1,CC_gene:CYP85A3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032400001~ Cytochrome P450 85A~ BA13~ complete;original_location=join(2310536..2310726%2C2311409..2311730%2C2312043..2312192%2C2312283..2312534%2C2312617..2312703%2C2312810..2312888%2C2313052..2313161%2C2313260..2313384%2C2313537..2313627);owner=coffea | |
| 68076 chr11 manual_curation exon 29031940 29032130 . - . Parent=GSCOCT00032400001 | |
| 68077 chr11 manual_curation exon 29030936 29031257 . - . Parent=GSCOCT00032400001 | |
| 68078 chr11 manual_curation exon 29030474 29030623 . - . Parent=GSCOCT00032400001 | |
| 68079 chr11 manual_curation exon 29030132 29030383 . - . Parent=GSCOCT00032400001 | |
| 68080 chr11 manual_curation exon 29029963 29030049 . - . Parent=GSCOCT00032400001 | |
| 68081 chr11 manual_curation exon 29029778 29029856 . - . Parent=GSCOCT00032400001 | |
| 68082 chr11 manual_curation exon 29029505 29029614 . - . Parent=GSCOCT00032400001 | |
| 68083 chr11 manual_curation exon 29029282 29029406 . - . Parent=GSCOCT00032400001 | |
| 68084 chr11 manual_curation exon 29029039 29029129 . - . Parent=GSCOCT00032400001 | |
| 68085 chr11 manual_curation CDS 29031940 29032130 . - 0 Parent=GSCOCT00032400001 | |
| 68086 chr11 manual_curation CDS 29030936 29031257 . - 2 Parent=GSCOCT00032400001 | |
| 68087 chr11 manual_curation CDS 29030474 29030623 . - 0 Parent=GSCOCT00032400001 | |
| 68088 chr11 manual_curation CDS 29030132 29030383 . - 0 Parent=GSCOCT00032400001 | |
| 68089 chr11 manual_curation CDS 29029963 29030049 . - 0 Parent=GSCOCT00032400001 | |
| 68090 chr11 manual_curation CDS 29029778 29029856 . - 0 Parent=GSCOCT00032400001 | |
| 68091 chr11 manual_curation CDS 29029505 29029614 . - 1 Parent=GSCOCT00032400001 | |
| 68092 chr11 manual_curation CDS 29029282 29029406 . - 0 Parent=GSCOCT00032400001 | |
| 68093 chr11 manual_curation CDS 29029039 29029129 . - 2 Parent=GSCOCT00032400001 | |
| 68094 chr11 manual_curation gene 29041286 29045194 . + . ID=GSCOCG00032397001;Name=Cc11_g11790 | |
| 68095 chr11 manual_curation mRNA 29041286 29045194 . + . ID=GSCOCT00032397001;Parent=GSCOCG00032397001;Name=Cc11_g11790 | |
| 68096 chr11 manual_curation polypeptide 29041583 29044889 . + . ID=GSCOCP00032397001;Dbxref=GENE3D:G3DSA:3.10.120.10,InterPro:IPR001199,InterPro:IPR018506,PFAM:PF00173,PRINTS:PR00363,PROFILE:PS50255,PROSITE:PS00191,SUPERFAMILY:SSF55856,SwissProt:O04354,SwissProt:O48845,SwissProt:P49100,TAIR:AT1G26340.1,TAIR:AT2G32720.1,TAIR:AT5G53560.1,TrEMBL:B9HXI1,TrEMBL:D7T9Y7,TrEMBL:Q5V9L1;Derives_from=GSCOCT00032397001;Name=Cc11_g11790;Ontology_term=CC_evidence_code:ISS,GO:0020037,CC_EC_number:1.7.1.1,PRODUCT:Putative Probable cytochrome b5 isoform 2,CC_functional_completeness:complete,CC_gene:At2g32720,CC_gene:Os05g0108800;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032397001~ Putative Probable cytochrome b5 isoform 2~ At2g32720~ complete;original_location=complement(join(2300997..2301083%2C2298171..2298237%2C2297777..2298027));owner=coffea | |
| 68097 chr11 manual_curation exon 29044639 29045194 . + . Parent=GSCOCT00032397001 | |
| 68098 chr11 manual_curation exon 29044429 29044495 . + . Parent=GSCOCT00032397001 | |
| 68099 chr11 manual_curation exon 29041286 29041669 . + . Parent=GSCOCT00032397001 | |
| 68100 chr11 manual_curation CDS 29044639 29044889 . + 1 Parent=GSCOCT00032397001 | |
| 68101 chr11 manual_curation CDS 29044429 29044495 . + 0 Parent=GSCOCT00032397001 | |
| 68102 chr11 manual_curation CDS 29041583 29041669 . + 0 Parent=GSCOCT00032397001 | |
| 68103 chr11 manual_curation gene 29045797 29048046 . + . ID=GSCOCG00032396001;Name=Cc11_g11800 | |
| 68104 chr11 manual_curation mRNA 29045797 29048046 . + . ID=GSCOCT00032396001;Parent=GSCOCG00032396001;Name=Cc11_g11800 | |
| 68105 chr11 manual_curation polypeptide 29045898 29047701 . + . ID=GSCOCP00032396001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR012677,InterPro:IPR015465,PANTHER:PTHR10432:SF31,PFAM:PF00076,PROFILE:PS50102,SMART:SM00360,SwissProt:Q5R723,SwissProt:Q9QZH3,SwissProt:Q9UNP9,TAIR:AT1G13690.1,TAIR:AT3G08000.1,TAIR:AT5G61030.1,TrEMBL:B9REC1,TrEMBL:D7U1R3,TrEMBL:I1GQE8;Derives_from=GSCOCT00032396001;Name=Cc11_g11800;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,CC_EC_number:missing_EC_number,PRODUCT:ATPase E1,CC_functional_completeness:complete,CC_gene:Ppie,CC_gene:PPIE;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032396001~ ATPase E1~ Ppie~ complete;original_location=complement(join(2296468..2296768%2C2294965..2295179));owner=coffea | |
| 68106 chr11 manual_curation exon 29047487 29048046 . + . Parent=GSCOCT00032396001 | |
| 68107 chr11 manual_curation exon 29045797 29046198 . + . Parent=GSCOCT00032396001 | |
| 68108 chr11 manual_curation CDS 29047487 29047701 . + 1 Parent=GSCOCT00032396001 | |
| 68109 chr11 manual_curation CDS 29045898 29046198 . + 0 Parent=GSCOCT00032396001 | |
| 68110 chr11 manual_curation gene 29048717 29051260 . - . ID=GSCOCG00032395001;Name=Cc11_g11810 | |
| 68111 chr11 manual_curation mRNA 29048717 29051260 . - . ID=GSCOCT00032395001;Parent=GSCOCG00032395001;Name=Cc11_g11810 | |
| 68112 chr11 manual_curation polypeptide 29049059 29050948 . - . ID=GSCOCP00032395001;Dbxref=GENE3D:G3DSA:3.20.20.20,GENE3D:G3DSA:3.30.70.560,InterPro:IPR000489,InterPro:IPR000550,InterPro:IPR006390,InterPro:IPR011005,PANTHER:PTHR20941:SF1,PFAM:PF00809,PFAM:PF01288,PROFILE:PS50972,PROSITE:PS00792,PROSITE:PS00793,PROSITE:PS00794,SUPERFAMILY:SSF51717,SUPERFAMILY:SSF55083,SwissProt:P29251,SwissProt:P53848,SwissProt:Q4LB35,TAIR:AT1G69190.1,TAIR:AT4G30000.2,TIGRFAMs:TIGR01496,TIGRFAMs:TIGR01498,TrEMBL:B9HIG0,TrEMBL:C5IXL4,TrEMBL:F6HEZ6;Derives_from=GSCOCT00032395001;Name=Cc11_g11810;Ontology_term=CC_evidence_code:ISS,GO:0003848,GO:0004156,GO:0009396,GO:0042558,GO:0044237,CC_EC_number:2.5.1.15,CC_EC_number:2.5.1.15,PRODUCT:Putative Folic acid synthesis protein fol1,CC_functional_completeness:fragment,CC_gene:fol1,CC_gene:FOL1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032395001~ Putative Folic acid synthesis protein fol1~ fol1~ fragment;original_location=join(2291718..2291781%2C2292056..2293483%2C2293540..2293607);owner=coffea | |
| 68113 chr11 manual_curation exon 29050885 29051260 . - . Parent=GSCOCT00032395001 | |
| 68114 chr11 manual_curation exon 29049183 29050610 . - . Parent=GSCOCT00032395001 | |
| 68115 chr11 manual_curation exon 29048717 29049126 . - . Parent=GSCOCT00032395001 | |
| 68116 chr11 manual_curation CDS 29050885 29050948 . - 0 Parent=GSCOCT00032395001 | |
| 68117 chr11 manual_curation CDS 29049183 29050610 . - 1 Parent=GSCOCT00032395001 | |
| 68118 chr11 manual_curation CDS 29049059 29049126 . - 1 Parent=GSCOCT00032395001 | |
| 68119 chr11 manual_curation gene 29051342 29054847 . + . ID=GSCOCG00032394001;Name=Cc11_g11820 | |
| 68120 chr11 manual_curation mRNA 29051342 29054847 . + . ID=GSCOCT00032394001;Parent=GSCOCG00032394001;Name=Cc11_g11820 | |
| 68121 chr11 manual_curation polypeptide 29051470 29054847 . + . ID=GSCOCP00032394001;Dbxref=InterPro:IPR002173,InterPro:IPR011611,PFAM:PF00294,PROSITE:PS00583,SwissProt:Q42896,SwissProt:Q7XJ81,SwissProt:Q9SID0,TAIR:AT1G69200.1,TAIR:AT3G54090.1,TAIR:AT5G51830.1,TrEMBL:D7T9Y5,TrEMBL:D9IWP0,TrEMBL:I1J631;Derives_from=GSCOCT00032394001;Name=Cc11_g11820;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.7.1.4,PRODUCT:Putative Fructokinase-2,CC_functional_completeness:modules,CC_gene:FRK2,CC_gene:At2g31390;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032394001~ Putative Fructokinase-2~ FRK2~ modules;original_location=complement(join(2291156..2291196%2C2290471..2290811%2C2289721..2290358%2C2288557..2289028%2C2287819..2288045));owner=coffea | |
| 68122 chr11 manual_curation exon 29054621 29054847 . + . Parent=GSCOCT00032394001 | |
| 68123 chr11 manual_curation exon 29053638 29054109 . + . Parent=GSCOCT00032394001 | |
| 68124 chr11 manual_curation exon 29052308 29052945 . + . Parent=GSCOCT00032394001 | |
| 68125 chr11 manual_curation exon 29051855 29052195 . + . Parent=GSCOCT00032394001 | |
| 68126 chr11 manual_curation exon 29051342 29051510 . + . Parent=GSCOCT00032394001 | |
| 68127 chr11 manual_curation CDS 29054621 29054847 . + 1 Parent=GSCOCT00032394001 | |
| 68128 chr11 manual_curation CDS 29053638 29054109 . + 0 Parent=GSCOCT00032394001 | |
| 68129 chr11 manual_curation CDS 29052308 29052945 . + 1 Parent=GSCOCT00032394001 | |
| 68130 chr11 manual_curation CDS 29051855 29052195 . + 2 Parent=GSCOCT00032394001 | |
| 68131 chr11 manual_curation CDS 29051470 29051510 . + 0 Parent=GSCOCT00032394001 | |
| 68132 chr11 manual_curation gene 29054938 29060204 . - . ID=GSCOCG00032393001;Name=Cc11_g11830 | |
| 68133 chr11 manual_curation mRNA 29054938 29060204 . - . ID=GSCOCT00032393001;Parent=GSCOCG00032393001;Name=Cc11_g11830 | |
| 68134 chr11 manual_curation polypeptide 29056309 29059388 . - . ID=GSCOCP00032393001;Dbxref=InterPro:IPR005900,PANTHER:PTHR11054,SwissProt:A2YNH4,SwissProt:Q6Z4H0,SwissProt:Q9LMX8,TAIR:AT1G13700.1,TAIR:AT3G49360.1,TAIR:AT5G24400.1,TIGRFAMs:TIGR01198,TrEMBL:A5BJC3,TrEMBL:B9HXI3,TrEMBL:B9REC3;Derives_from=GSCOCT00032393001;Name=Cc11_g11830;Ontology_term=CC_evidence_code:ISS,GO:0005975,GO:0006098,GO:0017057,CC_EC_number:3.1.1.31,PRODUCT:Probable 6-phosphogluconolactonase 1,CC_functional_completeness:complete,CC_gene:At1g13700,CC_gene:Os07g0604000,CC_gene:OsI_025867;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032393001~ Probable 6-phosphogluconolactonase 1~ At1g13700~ complete;original_location=join(2283278..2283450%2C2283527..2283662%2C2285866..2286357);owner=coffea | |
| 68135 chr11 manual_curation exon 29060149 29060204 . - . Parent=GSCOCT00032393001 | |
| 68136 chr11 manual_curation exon 29059216 29059419 . - . Parent=GSCOCT00032393001 | |
| 68137 chr11 manual_curation exon 29059004 29059139 . - . Parent=GSCOCT00032393001 | |
| 68138 chr11 manual_curation exon 29054938 29056800 . - . Parent=GSCOCT00032393001 | |
| 68139 chr11 manual_curation CDS 29059216 29059388 . - 0 Parent=GSCOCT00032393001 | |
| 68140 chr11 manual_curation CDS 29059004 29059139 . - 2 Parent=GSCOCT00032393001 | |
| 68141 chr11 manual_curation CDS 29056309 29056800 . - 0 Parent=GSCOCT00032393001 | |
| 68142 chr11 manual_curation gene 29067161 29070118 . - . ID=GSCOCG00032391001;Name=Cc11_g11840 | |
| 68143 chr11 manual_curation mRNA 29067161 29070118 . - . ID=GSCOCT00032391001;Parent=GSCOCG00032391001;Name=Cc11_g11840 | |
| 68144 chr11 manual_curation polypeptide 29067637 29069083 . - . ID=GSCOCP00032391001;Dbxref=HAMAP:MF_01077,InterPro:IPR003728,PFAM:PF02576,TAIR:AT1G69210.1,TAIR:AT1G77122.1,TrEMBL:D7T9Y2,TrEMBL:G7JY21,TrEMBL:I1JEH0;Derives_from=GSCOCT00032391001;Name=Cc11_g11840;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterised protein family UPF0090,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032391001~ Uncharacterised protein family UPF0090~ unknown_gene~ fragment;original_location=join(2273583..2273651%2C2273735..2273910%2C2274448..2274556%2C2274727..2275029);owner=coffea | |
| 68145 chr11 manual_curation exon 29069015 29070118 . - . Parent=GSCOCT00032391001 | |
| 68146 chr11 manual_curation exon 29068756 29068931 . - . Parent=GSCOCT00032391001 | |
| 68147 chr11 manual_curation exon 29068110 29068218 . - . Parent=GSCOCT00032391001 | |
| 68148 chr11 manual_curation exon 29067161 29067939 . - . Parent=GSCOCT00032391001 | |
| 68149 chr11 manual_curation CDS 29069015 29069083 . - 0 Parent=GSCOCT00032391001 | |
| 68150 chr11 manual_curation CDS 29068756 29068931 . - 0 Parent=GSCOCT00032391001 | |
| 68151 chr11 manual_curation CDS 29068110 29068218 . - 2 Parent=GSCOCT00032391001 | |
| 68152 chr11 manual_curation CDS 29067637 29067939 . - 0 Parent=GSCOCT00032391001 | |
| 68153 chr11 manual_curation gene 29070406 29079043 . - . ID=GSCOCG00032390001;Name=Cc11_g11850 | |
| 68154 chr11 manual_curation mRNA 29070406 29079043 . - . ID=GSCOCT00032390001;Parent=GSCOCG00032390001;Name=Cc11_g11850 | |
| 68155 chr11 manual_curation polypeptide 29070673 29078440 . - . ID=GSCOCP00032390001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:O61125,SwissProt:Q55FS2,SwissProt:Q86IX1,TAIR:AT1G53165.3,TAIR:AT1G69220.1,TAIR:AT3G15220.1,TrEMBL:B3GK00,TrEMBL:B9REC4,TrEMBL:F6HFV2;Derives_from=GSCOCT00032390001;Name=Cc11_g11850;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.1,PRODUCT:Protein kinase superfamily protein,CC_functional_completeness:fragment,CC_gene:dst1,CC_gene:krsA,CC_gene:krsB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032390001~ Protein kinase superfamily protein~ dst1~ fragment;original_location=join(2264226..2264526%2C2264934..2265022%2C2265119..2265226%2C2265485..2265592%2C2266099..2266189%2C2266506..2266558%2C2266724..2266786%2C2266934..2266978%2C2267162..2267197%2C2268027..2268082%2C2268405..2268486%2C2269532..2269666%2C2269828..2269948%2C2270215..2270368%2C2270746..2270953%2C2271268..2271468%2C2271604..2271689%2C2271894..2271993);owner=coffea | |
| 68156 chr11 manual_curation exon 29078140 29079043 . - . Parent=GSCOCT00032390001 | |
| 68157 chr11 manual_curation exon 29077644 29077732 . - . Parent=GSCOCT00032390001 | |
| 68158 chr11 manual_curation exon 29077440 29077547 . - . Parent=GSCOCT00032390001 | |
| 68159 chr11 manual_curation exon 29077074 29077181 . - . Parent=GSCOCT00032390001 | |
| 68160 chr11 manual_curation exon 29076477 29076567 . - . Parent=GSCOCT00032390001 | |
| 68161 chr11 manual_curation exon 29076108 29076160 . - . Parent=GSCOCT00032390001 | |
| 68162 chr11 manual_curation exon 29075880 29075942 . - . Parent=GSCOCT00032390001 | |
| 68163 chr11 manual_curation exon 29075688 29075732 . - . Parent=GSCOCT00032390001 | |
| 68164 chr11 manual_curation exon 29075469 29075504 . - . Parent=GSCOCT00032390001 | |
| 68165 chr11 manual_curation exon 29074584 29074639 . - . Parent=GSCOCT00032390001 | |
| 68166 chr11 manual_curation exon 29074180 29074261 . - . Parent=GSCOCT00032390001 | |
| 68167 chr11 manual_curation exon 29073000 29073134 . - . Parent=GSCOCT00032390001 | |
| 68168 chr11 manual_curation exon 29072718 29072838 . - . Parent=GSCOCT00032390001 | |
| 68169 chr11 manual_curation exon 29072298 29072451 . - . Parent=GSCOCT00032390001 | |
| 68170 chr11 manual_curation exon 29071713 29071920 . - . Parent=GSCOCT00032390001 | |
| 68171 chr11 manual_curation exon 29071198 29071398 . - . Parent=GSCOCT00032390001 | |
| 68172 chr11 manual_curation exon 29070977 29071062 . - . Parent=GSCOCT00032390001 | |
| 68173 chr11 manual_curation exon 29070406 29070772 . - . Parent=GSCOCT00032390001 | |
| 68174 chr11 manual_curation CDS 29078140 29078440 . - 0 Parent=GSCOCT00032390001 | |
| 68175 chr11 manual_curation CDS 29077644 29077732 . - 1 Parent=GSCOCT00032390001 | |
| 68176 chr11 manual_curation CDS 29077440 29077547 . - 0 Parent=GSCOCT00032390001 | |
| 68177 chr11 manual_curation CDS 29077074 29077181 . - 0 Parent=GSCOCT00032390001 | |
| 68178 chr11 manual_curation CDS 29076477 29076567 . - 0 Parent=GSCOCT00032390001 | |
| 68179 chr11 manual_curation CDS 29076108 29076160 . - 1 Parent=GSCOCT00032390001 | |
| 68180 chr11 manual_curation CDS 29075880 29075942 . - 0 Parent=GSCOCT00032390001 | |
| 68181 chr11 manual_curation CDS 29075688 29075732 . - 0 Parent=GSCOCT00032390001 | |
| 68182 chr11 manual_curation CDS 29075469 29075504 . - 0 Parent=GSCOCT00032390001 | |
| 68183 chr11 manual_curation CDS 29074584 29074639 . - 0 Parent=GSCOCT00032390001 | |
| 68184 chr11 manual_curation CDS 29074180 29074261 . - 2 Parent=GSCOCT00032390001 | |
| 68185 chr11 manual_curation CDS 29073000 29073134 . - 0 Parent=GSCOCT00032390001 | |
| 68186 chr11 manual_curation CDS 29072718 29072838 . - 0 Parent=GSCOCT00032390001 | |
| 68187 chr11 manual_curation CDS 29072298 29072451 . - 1 Parent=GSCOCT00032390001 | |
| 68188 chr11 manual_curation CDS 29071713 29071920 . - 2 Parent=GSCOCT00032390001 | |
| 68189 chr11 manual_curation CDS 29071198 29071398 . - 0 Parent=GSCOCT00032390001 | |
| 68190 chr11 manual_curation CDS 29070977 29071062 . - 0 Parent=GSCOCT00032390001 | |
| 68191 chr11 manual_curation CDS 29070673 29070772 . - 2 Parent=GSCOCT00032390001 | |
| 68192 chr11 manual_curation gene 29079699 29081688 . - . ID=GSCOCG00032389001;Name=Cc11_g11860 | |
| 68193 chr11 manual_curation mRNA 29079699 29081688 . - . ID=GSCOCT00032389001;Parent=GSCOCG00032389001;Name=Cc11_g11860 | |
| 68194 chr11 manual_curation polypeptide 29080059 29080805 . - . ID=GSCOCP00032389001;Derives_from=GSCOCT00032389001;Name=Cc11_g11860;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032389001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=2261861..2262607;owner=coffea | |
| 68195 chr11 manual_curation exon 29079699 29081688 . - . Parent=GSCOCT00032389001 | |
| 68196 chr11 manual_curation CDS 29080059 29080805 . - 0 Parent=GSCOCT00032389001 | |
| 68197 chr11 manual_curation gene 29082897 29094979 . - . ID=GSCOCG00032387001;Name=Cc11_g11870 | |
| 68198 chr11 manual_curation mRNA 29082897 29094979 . - . ID=GSCOCT00032387001;Parent=GSCOCG00032387001;Name=Cc11_g11870 | |
| 68199 chr11 manual_curation polypeptide 29084516 29094979 . - . ID=GSCOCP00032387001;Dbxref=InterPro:IPR001650,InterPro:IPR002464,InterPro:IPR007502,InterPro:IPR011709,InterPro:IPR014001,InterPro:IPR014021,PFAM:PF04408,PFAM:PF07717,PROFILE:PS51192,PROFILE:PS51194,PROSITE:PS00690,SMART:SM00487,SMART:SM00847,SwissProt:A2A4P0,SwissProt:Q14562,SwissProt:Q80VY9,TAIR:AT1G26370.1,TAIR:AT1G32490.1,TAIR:AT3G26560.1,TrEMBL:B9REC8,TrEMBL:F6GVM6,TrEMBL:I1J614;Derives_from=GSCOCT00032387001;Name=Cc11_g11870;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0004386,GO:0005524,GO:0008026,CC_EC_number:missing_EC_number,PRODUCT:Putative ATP-dependent RNA helicase DHX8,CC_functional_completeness:fragment,CC_gene:DHX8,CC_gene:Dhx8,CC_gene:Dhx33;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032387001~ Putative ATP-dependent RNA helicase DHX8~ DHX8~ fragment;original_location=join(2247687..2247924%2C2248170..2248250%2C2249667..2249883%2C2250106..2250502%2C2250863..2251084%2C2254531..2254659%2C2255176..2255375%2C2255943..2256174%2C2257207..2257406%2C2257709..2257843%2C2257970..2258150);owner=coffea | |
| 68200 chr11 manual_curation exon 29082897 29083661 . - . Parent=GSCOCT00032387001 | |
| 68201 chr11 manual_curation exon 29094742 29094979 . - . Parent=GSCOCT00032387001 | |
| 68202 chr11 manual_curation exon 29094416 29094496 . - . Parent=GSCOCT00032387001 | |
| 68203 chr11 manual_curation exon 29092783 29092999 . - . Parent=GSCOCT00032387001 | |
| 68204 chr11 manual_curation exon 29092164 29092560 . - . Parent=GSCOCT00032387001 | |
| 68205 chr11 manual_curation exon 29091582 29091803 . - . Parent=GSCOCT00032387001 | |
| 68206 chr11 manual_curation exon 29088007 29088135 . - . Parent=GSCOCT00032387001 | |
| 68207 chr11 manual_curation exon 29087291 29087490 . - . Parent=GSCOCT00032387001 | |
| 68208 chr11 manual_curation exon 29086492 29086723 . - . Parent=GSCOCT00032387001 | |
| 68209 chr11 manual_curation exon 29085260 29085459 . - . Parent=GSCOCT00032387001 | |
| 68210 chr11 manual_curation exon 29084823 29084957 . - . Parent=GSCOCT00032387001 | |
| 68211 chr11 manual_curation exon 29084495 29084696 . - . Parent=GSCOCT00032387001 | |
| 68212 chr11 manual_curation CDS 29094742 29094979 . - 0 Parent=GSCOCT00032387001 | |
| 68213 chr11 manual_curation CDS 29094416 29094496 . - 1 Parent=GSCOCT00032387001 | |
| 68214 chr11 manual_curation CDS 29092783 29092999 . - 1 Parent=GSCOCT00032387001 | |
| 68215 chr11 manual_curation CDS 29092164 29092560 . - 2 Parent=GSCOCT00032387001 | |
| 68216 chr11 manual_curation CDS 29091582 29091803 . - 0 Parent=GSCOCT00032387001 | |
| 68217 chr11 manual_curation CDS 29088007 29088135 . - 0 Parent=GSCOCT00032387001 | |
| 68218 chr11 manual_curation CDS 29087291 29087490 . - 0 Parent=GSCOCT00032387001 | |
| 68219 chr11 manual_curation CDS 29086492 29086723 . - 2 Parent=GSCOCT00032387001 | |
| 68220 chr11 manual_curation CDS 29085260 29085459 . - 0 Parent=GSCOCT00032387001 | |
| 68221 chr11 manual_curation CDS 29084823 29084957 . - 2 Parent=GSCOCT00032387001 | |
| 68222 chr11 manual_curation CDS 29084516 29084696 . - 2 Parent=GSCOCT00032387001 | |
| 68223 chr11 manual_curation gene 29095077 29095506 . - . ID=GSCOCG00032386001;Name=Cc11_g11880 | |
| 68224 chr11 manual_curation mRNA 29095077 29095506 . - . ID=GSCOCT00032386001;Parent=GSCOCG00032386001;Name=Cc11_g11880 | |
| 68225 chr11 manual_curation polypeptide 29095077 29095386 . - . ID=GSCOCP00032386001;Derives_from=GSCOCT00032386001;Name=Cc11_g11880;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032386001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(2247280..2247380%2C2247502..2247589);owner=coffea | |
| 68226 chr11 manual_curation exon 29095286 29095506 . - . Parent=GSCOCT00032386001 | |
| 68227 chr11 manual_curation exon 29095077 29095164 . - . Parent=GSCOCT00032386001 | |
| 68228 chr11 manual_curation CDS 29095286 29095386 . - 0 Parent=GSCOCT00032386001 | |
| 68229 chr11 manual_curation CDS 29095077 29095164 . - 2 Parent=GSCOCT00032386001 | |
| 68230 chr11 manual_curation gene 29096836 29103089 . - . ID=GSCOCG00032385001;Name=Cc11_g11890 | |
| 68231 chr11 manual_curation mRNA 29096836 29103089 . - . ID=GSCOCT00032385001;Parent=GSCOCG00032385001;Name=Cc11_g11890 | |
| 68232 chr11 manual_curation polypeptide 29096836 29103089 . - . ID=GSCOCP00032385001;Dbxref=InterPro:IPR003593,InterPro:IPR003959,InterPro:IPR003960,PFAM:PF00004,PROSITE:PS00674,SMART:SM00382,SwissProt:O28972,SwissProt:Q8NB90,SwissProt:Q9ZPR1,TAIR:AT2G03670.1,TAIR:AT3G53230.1,TAIR:AT5G03340.1,TrEMBL:B9MUF2,TrEMBL:B9SYF3,TrEMBL:I1JEF9;Derives_from=GSCOCT00032385001;Name=Cc11_g11890;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0017111,CC_EC_number:3.6.4.3,PRODUCT:Cell division control protein 48 homolog B,CC_functional_completeness:complete,CC_gene:CDC48B,CC_gene:AF_1297,CC_gene:SPATA5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032385001~ Cell division control protein 48 homolog B~ CDC48B~ complete;original_location=join(2239577..2239738%2C2239866..2239910%2C2240048..2240103%2C2240825..2240974%2C2241078..2241182%2C2241585..2241684%2C2241838..2242122%2C2242199..2242368%2C2243087..2243215%2C2244270..2244357%2C2244440..2244517%2C2244996..2245402%2C2245668..2245830);owner=coffea | |
| 68233 chr11 manual_curation exon 29102928 29103089 . - . Parent=GSCOCT00032385001 | |
| 68234 chr11 manual_curation exon 29102756 29102800 . - . Parent=GSCOCT00032385001 | |
| 68235 chr11 manual_curation exon 29102563 29102618 . - . Parent=GSCOCT00032385001 | |
| 68236 chr11 manual_curation exon 29101692 29101841 . - . Parent=GSCOCT00032385001 | |
| 68237 chr11 manual_curation exon 29101484 29101588 . - . Parent=GSCOCT00032385001 | |
| 68238 chr11 manual_curation exon 29100982 29101081 . - . Parent=GSCOCT00032385001 | |
| 68239 chr11 manual_curation exon 29100544 29100828 . - . Parent=GSCOCT00032385001 | |
| 68240 chr11 manual_curation exon 29100298 29100467 . - . Parent=GSCOCT00032385001 | |
| 68241 chr11 manual_curation exon 29099451 29099579 . - . Parent=GSCOCT00032385001 | |
| 68242 chr11 manual_curation exon 29098309 29098396 . - . Parent=GSCOCT00032385001 | |
| 68243 chr11 manual_curation exon 29098149 29098226 . - . Parent=GSCOCT00032385001 | |
| 68244 chr11 manual_curation exon 29097264 29097670 . - . Parent=GSCOCT00032385001 | |
| 68245 chr11 manual_curation exon 29096836 29096998 . - . Parent=GSCOCT00032385001 | |
| 68246 chr11 manual_curation CDS 29102928 29103089 . - 0 Parent=GSCOCT00032385001 | |
| 68247 chr11 manual_curation CDS 29102756 29102800 . - 0 Parent=GSCOCT00032385001 | |
| 68248 chr11 manual_curation CDS 29102563 29102618 . - 0 Parent=GSCOCT00032385001 | |
| 68249 chr11 manual_curation CDS 29101692 29101841 . - 2 Parent=GSCOCT00032385001 | |
| 68250 chr11 manual_curation CDS 29101484 29101588 . - 2 Parent=GSCOCT00032385001 | |
| 68251 chr11 manual_curation CDS 29100982 29101081 . - 2 Parent=GSCOCT00032385001 | |
| 68252 chr11 manual_curation CDS 29100544 29100828 . - 0 Parent=GSCOCT00032385001 | |
| 68253 chr11 manual_curation CDS 29100298 29100467 . - 0 Parent=GSCOCT00032385001 | |
| 68254 chr11 manual_curation CDS 29099451 29099579 . - 2 Parent=GSCOCT00032385001 | |
| 68255 chr11 manual_curation CDS 29098309 29098396 . - 2 Parent=GSCOCT00032385001 | |
| 68256 chr11 manual_curation CDS 29098149 29098226 . - 0 Parent=GSCOCT00032385001 | |
| 68257 chr11 manual_curation CDS 29097264 29097670 . - 0 Parent=GSCOCT00032385001 | |
| 68258 chr11 manual_curation CDS 29096836 29096998 . - 2 Parent=GSCOCT00032385001 | |
| 68259 chr11 manual_curation gene 29104552 29105999 . - . ID=GSCOCG00032384001;Name=Cc11_g11900 | |
| 68260 chr11 manual_curation mRNA 29104552 29105999 . - . ID=GSCOCT00032384001;Parent=GSCOCG00032384001;Name=Cc11_g11900 | |
| 68261 chr11 manual_curation polypeptide 29104552 29104836 . - . ID=GSCOCP00032384001;Derives_from=GSCOCT00032384001;Name=Cc11_g11900;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032384001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=2237830..2238114;owner=coffea | |
| 68262 chr11 manual_curation exon 29104552 29105999 . - . Parent=GSCOCT00032384001 | |
| 68263 chr11 manual_curation CDS 29104552 29104836 . - 0 Parent=GSCOCT00032384001 | |
| 68264 chr11 manual_curation gene 29109954 29116604 . - . ID=GSCOCG00032383001;Name=Cc11_g11910 | |
| 68265 chr11 manual_curation mRNA 29109954 29116604 . - . ID=GSCOCT00032383001;Parent=GSCOCG00032383001;Name=Cc11_g11910 | |
| 68266 chr11 manual_curation polypeptide 29110247 29116478 . - . ID=GSCOCP00032383001;Dbxref=GENE3D:G3DSA:3.40.50.620,InterPro:IPR001962,InterPro:IPR014729,InterPro:IPR017932,PFAM:PF00733,PROFILE:PS51278,SwissProt:Q4R5D4,SwissProt:Q5ZJN0,SwissProt:Q9NWL6,TAIR:AT2G03667.1,TrEMBL:D7T9X6,TrEMBL:G7JHJ3,TrEMBL:I1NDH9;Derives_from=GSCOCT00032383001;Name=Cc11_g11910;Ontology_term=CC_evidence_code:ISS,GO:0004066,GO:0006529,CC_EC_number:missing_EC_number,PRODUCT:Putative Asparagine synthetase domain-containing protein 1,CC_functional_completeness:modules,CC_gene:ASNSD1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032383001~ Putative Asparagine synthetase domain-containing protein 1~ ASNSD1~ modules;original_location=join(2226188..2226283%2C2226945..2227287%2C2227645..2227838%2C2227941..2228076%2C2228602..2228826%2C2229069..2229151%2C2229523..2229637%2C2229895..2230000%2C2230402..2230495%2C2230797..2230978%2C2231310..2231409%2C2231484..2231600%2C2232006..2232062%2C2232288..2232419);owner=coffea | |
| 68267 chr11 manual_curation exon 29116383 29116604 . - . Parent=GSCOCT00032383001 | |
| 68268 chr11 manual_curation exon 29115379 29115721 . - . Parent=GSCOCT00032383001 | |
| 68269 chr11 manual_curation exon 29114828 29115021 . - . Parent=GSCOCT00032383001 | |
| 68270 chr11 manual_curation exon 29114590 29114725 . - . Parent=GSCOCT00032383001 | |
| 68271 chr11 manual_curation exon 29113840 29114064 . - . Parent=GSCOCT00032383001 | |
| 68272 chr11 manual_curation exon 29113515 29113597 . - . Parent=GSCOCT00032383001 | |
| 68273 chr11 manual_curation exon 29113029 29113143 . - . Parent=GSCOCT00032383001 | |
| 68274 chr11 manual_curation exon 29112666 29112771 . - . Parent=GSCOCT00032383001 | |
| 68275 chr11 manual_curation exon 29112171 29112264 . - . Parent=GSCOCT00032383001 | |
| 68276 chr11 manual_curation exon 29111688 29111869 . - . Parent=GSCOCT00032383001 | |
| 68277 chr11 manual_curation exon 29111257 29111356 . - . Parent=GSCOCT00032383001 | |
| 68278 chr11 manual_curation exon 29111066 29111182 . - . Parent=GSCOCT00032383001 | |
| 68279 chr11 manual_curation exon 29110604 29110660 . - . Parent=GSCOCT00032383001 | |
| 68280 chr11 manual_curation exon 29109954 29110378 . - . Parent=GSCOCT00032383001 | |
| 68281 chr11 manual_curation CDS 29116383 29116478 . - 0 Parent=GSCOCT00032383001 | |
| 68282 chr11 manual_curation CDS 29115379 29115721 . - 0 Parent=GSCOCT00032383001 | |
| 68283 chr11 manual_curation CDS 29114828 29115021 . - 1 Parent=GSCOCT00032383001 | |
| 68284 chr11 manual_curation CDS 29114590 29114725 . - 0 Parent=GSCOCT00032383001 | |
| 68285 chr11 manual_curation CDS 29113840 29114064 . - 1 Parent=GSCOCT00032383001 | |
| 68286 chr11 manual_curation CDS 29113515 29113597 . - 1 Parent=GSCOCT00032383001 | |
| 68287 chr11 manual_curation CDS 29113029 29113143 . - 0 Parent=GSCOCT00032383001 | |
| 68288 chr11 manual_curation CDS 29112666 29112771 . - 1 Parent=GSCOCT00032383001 | |
| 68289 chr11 manual_curation CDS 29112171 29112264 . - 2 Parent=GSCOCT00032383001 | |
| 68290 chr11 manual_curation CDS 29111688 29111869 . - 0 Parent=GSCOCT00032383001 | |
| 68291 chr11 manual_curation CDS 29111257 29111356 . - 2 Parent=GSCOCT00032383001 | |
| 68292 chr11 manual_curation CDS 29111066 29111182 . - 0 Parent=GSCOCT00032383001 | |
| 68293 chr11 manual_curation CDS 29110604 29110660 . - 0 Parent=GSCOCT00032383001 | |
| 68294 chr11 manual_curation CDS 29110247 29110378 . - 0 Parent=GSCOCT00032383001 | |
| 68295 chr11 manual_curation gene 29123394 29125769 . + . ID=GSCOCG00032382001;Name=Cc11_g11920 | |
| 68296 chr11 manual_curation mRNA 29123394 29125769 . + . ID=GSCOCT00032382001;Parent=GSCOCG00032382001;Name=Cc11_g11920 | |
| 68297 chr11 manual_curation polypeptide 29123394 29125769 . + . ID=GSCOCP00032382001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR002075,InterPro:IPR012677,InterPro:IPR018222,PFAM:PF00076,PFAM:PF02136,PROFILE:PS50102,PROFILE:PS50177,SMART:SM00360,TAIR:AT2G03640.3,TAIR:AT3G25150.2,TAIR:AT5G60980.2,TrEMBL:A5C6W0,TrEMBL:B9N049,TrEMBL:F6H491;Derives_from=GSCOCT00032382001;Name=Cc11_g11920;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,GO:0005622,GO:0006810,CC_EC_number:missing_EC_number,PRODUCT:Putative Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032382001~ Putative Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain~ unknown_gene~ fragment;original_location=complement(join(2219093..2219272%2C2218300..2218534%2C2217730..2218080%2C2217468..2217592%2C2217246..2217356%2C2216897..2217166));owner=coffea | |
| 68298 chr11 manual_curation exon 29125500 29125769 . + . Parent=GSCOCT00032382001 | |
| 68299 chr11 manual_curation exon 29125310 29125420 . + . Parent=GSCOCT00032382001 | |
| 68300 chr11 manual_curation exon 29125074 29125198 . + . Parent=GSCOCT00032382001 | |
| 68301 chr11 manual_curation exon 29124586 29124936 . + . Parent=GSCOCT00032382001 | |
| 68302 chr11 manual_curation exon 29124132 29124366 . + . Parent=GSCOCT00032382001 | |
| 68303 chr11 manual_curation exon 29123394 29123573 . + . Parent=GSCOCT00032382001 | |
| 68304 chr11 manual_curation CDS 29125500 29125769 . + 0 Parent=GSCOCT00032382001 | |
| 68305 chr11 manual_curation CDS 29125310 29125420 . + 0 Parent=GSCOCT00032382001 | |
| 68306 chr11 manual_curation CDS 29125074 29125198 . + 1 Parent=GSCOCT00032382001 | |
| 68307 chr11 manual_curation CDS 29124586 29124936 . + 1 Parent=GSCOCT00032382001 | |
| 68308 chr11 manual_curation CDS 29124132 29124366 . + 0 Parent=GSCOCT00032382001 | |
| 68309 chr11 manual_curation CDS 29123394 29123573 . + 0 Parent=GSCOCT00032382001 | |
| 68310 chr11 manual_curation gene 29132162 29136137 . + . ID=GSCOCG00032381001;Name=Cc11_g11930 | |
| 68311 chr11 manual_curation mRNA 29132162 29136137 . + . ID=GSCOCT00032381001;Parent=GSCOCG00032381001;Name=Cc11_g11930 | |
| 68312 chr11 manual_curation polypeptide 29132408 29135925 . + . ID=GSCOCP00032381001;Dbxref=InterPro:IPR012463,PFAM:PF07897,SwissProt:Q94F39,SwissProt:Q9LMX5,SwissProt:Q9LQ98,TAIR:AT1G13740.1,TAIR:AT1G69260.1,TAIR:AT3G29575.1,TrEMBL:B9HXJ0,TrEMBL:B9RED1,TrEMBL:F6HFU9;Derives_from=GSCOCT00032381001;Name=Cc11_g11930;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Ninja-family protein AFP2,CC_functional_completeness:complete,CC_gene:AFP2,CC_gene:AFP1,CC_gene:AFP3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032381001~ Putative Ninja-family protein AFP2~ AFP2~ complete;original_location=complement(join(2209631..2210258%2C2209481..2209570%2C2206741..2207156));owner=coffea | |
| 68313 chr11 manual_curation exon 29135510 29136137 . + . Parent=GSCOCT00032381001 | |
| 68314 chr11 manual_curation exon 29133096 29133185 . + . Parent=GSCOCT00032381001 | |
| 68315 chr11 manual_curation exon 29132162 29133035 . + . Parent=GSCOCT00032381001 | |
| 68316 chr11 manual_curation CDS 29135510 29135925 . + 1 Parent=GSCOCT00032381001 | |
| 68317 chr11 manual_curation CDS 29133096 29133185 . + 1 Parent=GSCOCT00032381001 | |
| 68318 chr11 manual_curation CDS 29132408 29133035 . + 0 Parent=GSCOCT00032381001 | |
| 68319 chr11 manual_curation gene 29143269 29149102 . + . ID=GSCOCG00032379001;Name=Cc11_g11940 | |
| 68320 chr11 manual_curation mRNA 29143269 29149102 . + . ID=GSCOCT00032379001;Parent=GSCOCG00032379001;Name=Cc11_g11940 | |
| 68321 chr11 manual_curation polypeptide 29145021 29148531 . + . ID=GSCOCP00032379001;Dbxref=SwissProt:A2YFN7,SwissProt:Q67UQ7,SwissProt:Q9ZPR4,TAIR:AT1G16010.2,TAIR:AT1G80900.1,TAIR:AT2G03620.1,TrEMBL:B9HIE8,TrEMBL:B9RED4,TrEMBL:F6HFU6;Derives_from=GSCOCT00032379001;Name=Cc11_g11940;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Magnesium transporter MRS2-5,CC_functional_completeness:complete,CC_gene:MRS2-5,CC_gene:MRS2-B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032379001~ Magnesium transporter MRS2-5~ MRS2-5~ complete;original_location=complement(join(2197198..2197645%2C2195688..2195758%2C2195232..2195360%2C2194807..2195148%2C2194471..2194518%2C2194135..2194365));owner=coffea | |
| 68322 chr11 manual_curation exon 29144493 29144612 . + . Parent=GSCOCT00032379001 | |
| 68323 chr11 manual_curation exon 29143269 29143433 . + . Parent=GSCOCT00032379001 | |
| 68324 chr11 manual_curation exon 29148301 29149102 . + . Parent=GSCOCT00032379001 | |
| 68325 chr11 manual_curation exon 29148148 29148195 . + . Parent=GSCOCT00032379001 | |
| 68326 chr11 manual_curation exon 29147518 29147859 . + . Parent=GSCOCT00032379001 | |
| 68327 chr11 manual_curation exon 29147306 29147434 . + . Parent=GSCOCT00032379001 | |
| 68328 chr11 manual_curation exon 29146908 29146978 . + . Parent=GSCOCT00032379001 | |
| 68329 chr11 manual_curation exon 29144865 29145468 . + . Parent=GSCOCT00032379001 | |
| 68330 chr11 manual_curation CDS 29148301 29148531 . + 0 Parent=GSCOCT00032379001 | |
| 68331 chr11 manual_curation CDS 29148148 29148195 . + 0 Parent=GSCOCT00032379001 | |
| 68332 chr11 manual_curation CDS 29147518 29147859 . + 0 Parent=GSCOCT00032379001 | |
| 68333 chr11 manual_curation CDS 29147306 29147434 . + 0 Parent=GSCOCT00032379001 | |
| 68334 chr11 manual_curation CDS 29146908 29146978 . + 1 Parent=GSCOCT00032379001 | |
| 68335 chr11 manual_curation CDS 29145021 29145468 . + 0 Parent=GSCOCT00032379001 | |
| 68336 chr11 manual_curation gene 29149173 29152044 . - . ID=GSCOCG00032378001;Name=Cc11_g11950 | |
| 68337 chr11 manual_curation mRNA 29149173 29152044 . - . ID=GSCOCT00032378001;Parent=GSCOCG00032378001;Name=Cc11_g11950 | |
| 68338 chr11 manual_curation polypeptide 29149173 29151715 . - . ID=GSCOCP00032378001;Dbxref=TAIR:AT5G08010.1,TAIR:AT5G61040.1,TrEMBL:F6GSZ2,TrEMBL:F6HFU5,TrEMBL:G7IZA9;Derives_from=GSCOCT00032378001;Name=Cc11_g11950;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032378001~ Putative unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G08010.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).~ unknown_gene~ fragment;original_location=join(2190951..2191758%2C2191979..2192364%2C2192933..2193493);owner=coffea | |
| 68339 chr11 manual_curation exon 29150908 29152044 . - . Parent=GSCOCT00032378001 | |
| 68340 chr11 manual_curation exon 29150302 29150687 . - . Parent=GSCOCT00032378001 | |
| 68341 chr11 manual_curation exon 29149173 29149733 . - . Parent=GSCOCT00032378001 | |
| 68342 chr11 manual_curation CDS 29150908 29151715 . - 0 Parent=GSCOCT00032378001 | |
| 68343 chr11 manual_curation CDS 29150302 29150687 . - 1 Parent=GSCOCT00032378001 | |
| 68344 chr11 manual_curation CDS 29149173 29149733 . - 0 Parent=GSCOCT00032378001 | |
| 68345 chr11 manual_curation gene 29152620 29157975 . - . ID=GSCOCG00032377001;Name=Cc11_g11960 | |
| 68346 chr11 manual_curation mRNA 29152620 29157975 . - . ID=GSCOCT00032377001;Parent=GSCOCG00032377001;Name=Cc11_g11960 | |
| 68347 chr11 manual_curation polypeptide 29152620 29157975 . - . ID=GSCOCP00032377001;Dbxref=InterPro:IPR004843,InterPro:IPR008963,PFAM:PF00149,SUPERFAMILY:SSF49363,SwissProt:Q5MAU8,SwissProt:Q8H1R2,SwissProt:Q9LMX4,TAIR:AT1G13750.1,TAIR:AT4G24890.1,TAIR:AT5G50400.1,TrEMBL:B9HXJ3,TrEMBL:D7T9W8,TrEMBL:I1KXK7;Derives_from=GSCOCT00032377001;Name=Cc11_g11960;Ontology_term=CC_evidence_code:ISS,GO:0003993,GO:0016787,GO:0046872,CC_EC_number:missing_EC_number,CC_EC_number:missing_EC_number,PRODUCT:Probable inactive purple acid phosphatase 1,CC_functional_completeness:complete,CC_gene:PAP1,CC_gene:PAP27,CC_gene:PAP24;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032377001~ Probable inactive purple acid phosphatase 1~ PAP1~ complete;original_location=join(2184691..2185003%2C2185257..2185329%2C2185516..2185621%2C2185744..2185800%2C2186298..2186380%2C2186462..2186619%2C2187078..2187172%2C2187563..2187667%2C2187985..2188190%2C2188262..2188387%2C2188897..2189206%2C2189741..2190046);owner=coffea | |
| 68348 chr11 manual_curation exon 29157663 29157975 . - . Parent=GSCOCT00032377001 | |
| 68349 chr11 manual_curation exon 29157337 29157409 . - . Parent=GSCOCT00032377001 | |
| 68350 chr11 manual_curation exon 29157045 29157150 . - . Parent=GSCOCT00032377001 | |
| 68351 chr11 manual_curation exon 29156866 29156922 . - . Parent=GSCOCT00032377001 | |
| 68352 chr11 manual_curation exon 29156286 29156368 . - . Parent=GSCOCT00032377001 | |
| 68353 chr11 manual_curation exon 29156047 29156204 . - . Parent=GSCOCT00032377001 | |
| 68354 chr11 manual_curation exon 29155494 29155588 . - . Parent=GSCOCT00032377001 | |
| 68355 chr11 manual_curation exon 29154999 29155103 . - . Parent=GSCOCT00032377001 | |
| 68356 chr11 manual_curation exon 29154476 29154681 . - . Parent=GSCOCT00032377001 | |
| 68357 chr11 manual_curation exon 29154279 29154404 . - . Parent=GSCOCT00032377001 | |
| 68358 chr11 manual_curation exon 29153460 29153769 . - . Parent=GSCOCT00032377001 | |
| 68359 chr11 manual_curation exon 29152620 29152925 . - . Parent=GSCOCT00032377001 | |
| 68360 chr11 manual_curation CDS 29157663 29157975 . - 0 Parent=GSCOCT00032377001 | |
| 68361 chr11 manual_curation CDS 29157337 29157409 . - 1 Parent=GSCOCT00032377001 | |
| 68362 chr11 manual_curation CDS 29157045 29157150 . - 2 Parent=GSCOCT00032377001 | |
| 68363 chr11 manual_curation CDS 29156866 29156922 . - 0 Parent=GSCOCT00032377001 | |
| 68364 chr11 manual_curation CDS 29156286 29156368 . - 0 Parent=GSCOCT00032377001 | |
| 68365 chr11 manual_curation CDS 29156047 29156204 . - 2 Parent=GSCOCT00032377001 | |
| 68366 chr11 manual_curation CDS 29155494 29155588 . - 1 Parent=GSCOCT00032377001 | |
| 68367 chr11 manual_curation CDS 29154999 29155103 . - 0 Parent=GSCOCT00032377001 | |
| 68368 chr11 manual_curation CDS 29154476 29154681 . - 0 Parent=GSCOCT00032377001 | |
| 68369 chr11 manual_curation CDS 29154279 29154404 . - 2 Parent=GSCOCT00032377001 | |
| 68370 chr11 manual_curation CDS 29153460 29153769 . - 2 Parent=GSCOCT00032377001 | |
| 68371 chr11 manual_curation CDS 29152620 29152925 . - 0 Parent=GSCOCT00032377001 | |
| 68372 chr11 manual_curation gene 29161561 29166559 . + . ID=GSCOCG00032376001;Name=Cc11_g11970 | |
| 68373 chr11 manual_curation mRNA 29161561 29166559 . + . ID=GSCOCT00032376001;Parent=GSCOCG00032376001;Name=Cc11_g11970 | |
| 68374 chr11 manual_curation polypeptide 29162718 29166197 . + . ID=GSCOCP00032376001;Dbxref=SwissProt:Q41706,SwissProt:Q9ZPR7,SwissProt:Q9ZQ89,TAIR:AT2G03520.1,TAIR:AT2G03530.1,TAIR:AT2G03590.1,TrEMBL:B9HIE2,TrEMBL:F6HFU3,TrEMBL:G7JY00;Derives_from=GSCOCT00032376001;Name=Cc11_g11970;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Ureide permease 2,CC_functional_completeness:complete,CC_gene:UPS2,CC_gene:UPS1,CC_gene:A3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032376001~ Ureide permease 2~ UPS2~ complete;original_location=complement(join(2179712..2179948%2C2178602..2178740%2C2178332..2178506%2C2177624..2177667%2C2177432..2177532%2C2176726..2177100%2C2176469..2176621));owner=coffea | |
| 68375 chr11 manual_curation exon 29161561 29162075 . + . Parent=GSCOCT00032376001 | |
| 68376 chr11 manual_curation exon 29166045 29166559 . + . Parent=GSCOCT00032376001 | |
| 68377 chr11 manual_curation exon 29165566 29165940 . + . Parent=GSCOCT00032376001 | |
| 68378 chr11 manual_curation exon 29165134 29165234 . + . Parent=GSCOCT00032376001 | |
| 68379 chr11 manual_curation exon 29164999 29165042 . + . Parent=GSCOCT00032376001 | |
| 68380 chr11 manual_curation exon 29164160 29164334 . + . Parent=GSCOCT00032376001 | |
| 68381 chr11 manual_curation exon 29163926 29164064 . + . Parent=GSCOCT00032376001 | |
| 68382 chr11 manual_curation exon 29162652 29162954 . + . Parent=GSCOCT00032376001 | |
| 68383 chr11 manual_curation CDS 29166045 29166197 . + 0 Parent=GSCOCT00032376001 | |
| 68384 chr11 manual_curation CDS 29165566 29165940 . + 0 Parent=GSCOCT00032376001 | |
| 68385 chr11 manual_curation CDS 29165134 29165234 . + 1 Parent=GSCOCT00032376001 | |
| 68386 chr11 manual_curation CDS 29164999 29165042 . + 2 Parent=GSCOCT00032376001 | |
| 68387 chr11 manual_curation CDS 29164160 29164334 . + 1 Parent=GSCOCT00032376001 | |
| 68388 chr11 manual_curation CDS 29163926 29164064 . + 0 Parent=GSCOCT00032376001 | |
| 68389 chr11 manual_curation CDS 29162718 29162954 . + 0 Parent=GSCOCT00032376001 | |
| 68390 chr11 manual_curation gene 29167835 29174228 . - . ID=GSCOCG00032374001;Name=Cc11_g11980 | |
| 68391 chr11 manual_curation mRNA 29167835 29174228 . - . ID=GSCOCT00032374001;Parent=GSCOCG00032374001;Name=Cc11_g11980 | |
| 68392 chr11 manual_curation polypeptide 29168101 29173371 . - . ID=GSCOCP00032374001;Dbxref=InterPro:IPR006968,PANTHER:PTHR12770,PFAM:PF04884,SwissProt:Q5R8F6,SwissProt:Q91W34,SwissProt:Q96GQ5,TAIR:AT1G13770.1,TAIR:AT2G31190.1,TAIR:AT3G45890.1,TrEMBL:B9REE1,TrEMBL:D7T9W6,TrEMBL:I1J605;Derives_from=GSCOCT00032374001;Name=Cc11_g11980;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative UPF0420 protein C16orf58 homolog,CC_functional_completeness:complete,CC_gene:C16orf58;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032374001~ Putative UPF0420 protein C16orf58 homolog~ C16orf58~ complete;original_location=join(2169295..2169369%2C2169471..2169509%2C2169607..2169669%2C2169761..2169817%2C2170108..2170171%2C2170746..2170829%2C2172376..2172458%2C2172530..2172659%2C2172772..2172864%2C2173345..2173483%2C2173802..2173842%2C2173926..2174113%2C2174467..2174565);owner=coffea | |
| 68393 chr11 manual_curation exon 29173297 29174228 . - . Parent=GSCOCT00032374001 | |
| 68394 chr11 manual_curation exon 29173157 29173195 . - . Parent=GSCOCT00032374001 | |
| 68395 chr11 manual_curation exon 29172997 29173059 . - . Parent=GSCOCT00032374001 | |
| 68396 chr11 manual_curation exon 29172849 29172905 . - . Parent=GSCOCT00032374001 | |
| 68397 chr11 manual_curation exon 29172495 29172558 . - . Parent=GSCOCT00032374001 | |
| 68398 chr11 manual_curation exon 29171837 29171920 . - . Parent=GSCOCT00032374001 | |
| 68399 chr11 manual_curation exon 29170208 29170290 . - . Parent=GSCOCT00032374001 | |
| 68400 chr11 manual_curation exon 29170007 29170136 . - . Parent=GSCOCT00032374001 | |
| 68401 chr11 manual_curation exon 29169802 29169894 . - . Parent=GSCOCT00032374001 | |
| 68402 chr11 manual_curation exon 29169183 29169321 . - . Parent=GSCOCT00032374001 | |
| 68403 chr11 manual_curation exon 29168824 29168864 . - . Parent=GSCOCT00032374001 | |
| 68404 chr11 manual_curation exon 29168553 29168740 . - . Parent=GSCOCT00032374001 | |
| 68405 chr11 manual_curation exon 29167835 29168199 . - . Parent=GSCOCT00032374001 | |
| 68406 chr11 manual_curation CDS 29173297 29173371 . - 0 Parent=GSCOCT00032374001 | |
| 68407 chr11 manual_curation CDS 29173157 29173195 . - 0 Parent=GSCOCT00032374001 | |
| 68408 chr11 manual_curation CDS 29172997 29173059 . - 0 Parent=GSCOCT00032374001 | |
| 68409 chr11 manual_curation CDS 29172849 29172905 . - 0 Parent=GSCOCT00032374001 | |
| 68410 chr11 manual_curation CDS 29172495 29172558 . - 0 Parent=GSCOCT00032374001 | |
| 68411 chr11 manual_curation CDS 29171837 29171920 . - 1 Parent=GSCOCT00032374001 | |
| 68412 chr11 manual_curation CDS 29170208 29170290 . - 1 Parent=GSCOCT00032374001 | |
| 68413 chr11 manual_curation CDS 29170007 29170136 . - 0 Parent=GSCOCT00032374001 | |
| 68414 chr11 manual_curation CDS 29169802 29169894 . - 1 Parent=GSCOCT00032374001 | |
| 68415 chr11 manual_curation CDS 29169183 29169321 . - 1 Parent=GSCOCT00032374001 | |
| 68416 chr11 manual_curation CDS 29168824 29168864 . - 2 Parent=GSCOCT00032374001 | |
| 68417 chr11 manual_curation CDS 29168553 29168740 . - 1 Parent=GSCOCT00032374001 | |
| 68418 chr11 manual_curation CDS 29168101 29168199 . - 0 Parent=GSCOCT00032374001 | |
| 68419 chr11 manual_curation gene 29174641 29179501 . + . ID=GSCOCG00032373001;Name=Cc11_g11990 | |
| 68420 chr11 manual_curation mRNA 29174641 29179501 . + . ID=GSCOCT00032373001;Parent=GSCOCG00032373001;Name=Cc11_g11990 | |
| 68421 chr11 manual_curation polypeptide 29174641 29179077 . + . ID=GSCOCP00032373001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:P0C7R4,SwissProt:Q9CAA5,SwissProt:Q9SA60,TAIR:AT1G03100.1,TAIR:AT1G68980.1,TAIR:AT1G69290.1,TIGRFAMs:TIGR00756,TrEMBL:B9HIE4,TrEMBL:B9REE0,TrEMBL:D7T9W7;Derives_from=GSCOCT00032373001;Name=Cc11_g11990;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At1g69290,CC_functional_completeness:modules,CC_gene:At1g69290,CC_gene:At1g68980,CC_gene:At1g03100;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032373001~ Pentatricopeptide repeat-containing protein At1g69290~ At1g69290~ modules;original_location=complement(join(2166072..2168025%2C2165726..2165764%2C2164203..2165027%2C2164045..2164101%2C2163589..2163623));owner=coffea | |
| 68422 chr11 manual_curation exon 29179043 29179501 . + . Parent=GSCOCT00032373001 | |
| 68423 chr11 manual_curation exon 29178565 29178621 . + . Parent=GSCOCT00032373001 | |
| 68424 chr11 manual_curation exon 29177639 29178463 . + . Parent=GSCOCT00032373001 | |
| 68425 chr11 manual_curation exon 29176902 29176940 . + . Parent=GSCOCT00032373001 | |
| 68426 chr11 manual_curation exon 29174641 29176594 . + . Parent=GSCOCT00032373001 | |
| 68427 chr11 manual_curation CDS 29179043 29179077 . + 1 Parent=GSCOCT00032373001 | |
| 68428 chr11 manual_curation CDS 29178565 29178621 . + 1 Parent=GSCOCT00032373001 | |
| 68429 chr11 manual_curation CDS 29177639 29178463 . + 1 Parent=GSCOCT00032373001 | |
| 68430 chr11 manual_curation CDS 29176902 29176940 . + 1 Parent=GSCOCT00032373001 | |
| 68431 chr11 manual_curation CDS 29174641 29176594 . + 0 Parent=GSCOCT00032373001 | |
| 68432 chr11 manual_curation gene 29180510 29186345 . + . ID=GSCOCG00032372001;Name=Cc11_g12000 | |
| 68433 chr11 manual_curation mRNA 29180510 29186345 . + . ID=GSCOCT00032372001;Parent=GSCOCG00032372001;Name=Cc11_g12000 | |
| 68434 chr11 manual_curation polypeptide 29180929 29186028 . + . ID=GSCOCP00032372001;Dbxref=GENE3D:G3DSA:2.60.40.380,InterPro:IPR004843,InterPro:IPR008963,InterPro:IPR015914,PFAM:PF00149,SUPERFAMILY:SSF49363,SwissProt:Q5MAU8,SwissProt:Q8H1R2,SwissProt:Q9LMX4,TAIR:AT1G13750.1,TAIR:AT4G24890.1,TAIR:AT5G50400.1,TrEMBL:B9HXJ3,TrEMBL:D7T9W8,TrEMBL:Q8VXF6;Derives_from=GSCOCT00032372001;Name=Cc11_g12000;Ontology_term=CC_evidence_code:ISS,GO:0003993,GO:0016787,GO:0046872,CC_EC_number:missing_EC_number,CC_EC_number:missing_EC_number,PRODUCT:Probable inactive purple acid phosphatase 1,CC_functional_completeness:complete,CC_gene:PAP1,CC_gene:PAP27,CC_gene:PAP24;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032372001~ Probable inactive purple acid phosphatase 1~ PAP1~ complete;original_location=complement(join(2161570..2161737%2C2161283..2161374%2C2161071..2161137%2C2160840..2160962%2C2160145..2160237%2C2159734..2159863%2C2159237..2159318%2C2159030..2159162%2C2158411..2158616%2C2158203..2158328%2C2157413..2157722%2C2156638..2156943));owner=coffea | |
| 68435 chr11 manual_curation exon 29180510 29180662 . + . Parent=GSCOCT00032372001 | |
| 68436 chr11 manual_curation exon 29185723 29186345 . + . Parent=GSCOCT00032372001 | |
| 68437 chr11 manual_curation exon 29184944 29185253 . + . Parent=GSCOCT00032372001 | |
| 68438 chr11 manual_curation exon 29184338 29184463 . + . Parent=GSCOCT00032372001 | |
| 68439 chr11 manual_curation exon 29184050 29184255 . + . Parent=GSCOCT00032372001 | |
| 68440 chr11 manual_curation exon 29183504 29183636 . + . Parent=GSCOCT00032372001 | |
| 68441 chr11 manual_curation exon 29183348 29183429 . + . Parent=GSCOCT00032372001 | |
| 68442 chr11 manual_curation exon 29182803 29182932 . + . Parent=GSCOCT00032372001 | |
| 68443 chr11 manual_curation exon 29182429 29182521 . + . Parent=GSCOCT00032372001 | |
| 68444 chr11 manual_curation exon 29181704 29181826 . + . Parent=GSCOCT00032372001 | |
| 68445 chr11 manual_curation exon 29181529 29181595 . + . Parent=GSCOCT00032372001 | |
| 68446 chr11 manual_curation exon 29181292 29181383 . + . Parent=GSCOCT00032372001 | |
| 68447 chr11 manual_curation exon 29180912 29181096 . + . Parent=GSCOCT00032372001 | |
| 68448 chr11 manual_curation CDS 29185723 29186028 . + 0 Parent=GSCOCT00032372001 | |
| 68449 chr11 manual_curation CDS 29184944 29185253 . + 2 Parent=GSCOCT00032372001 | |
| 68450 chr11 manual_curation CDS 29184338 29184463 . + 2 Parent=GSCOCT00032372001 | |
| 68451 chr11 manual_curation CDS 29184050 29184255 . + 0 Parent=GSCOCT00032372001 | |
| 68452 chr11 manual_curation CDS 29183504 29183636 . + 2 Parent=GSCOCT00032372001 | |
| 68453 chr11 manual_curation CDS 29183348 29183429 . + 1 Parent=GSCOCT00032372001 | |
| 68454 chr11 manual_curation CDS 29182803 29182932 . + 0 Parent=GSCOCT00032372001 | |
| 68455 chr11 manual_curation CDS 29182429 29182521 . + 0 Parent=GSCOCT00032372001 | |
| 68456 chr11 manual_curation CDS 29181704 29181826 . + 0 Parent=GSCOCT00032372001 | |
| 68457 chr11 manual_curation CDS 29181529 29181595 . + 2 Parent=GSCOCT00032372001 | |
| 68458 chr11 manual_curation CDS 29181292 29181383 . + 0 Parent=GSCOCT00032372001 | |
| 68459 chr11 manual_curation CDS 29180929 29181096 . + 0 Parent=GSCOCT00032372001 | |
| 68460 chr11 manual_curation gene 29187413 29193542 . + . ID=GSCOCG00032371001;Name=Cc11_g12010 | |
| 68461 chr11 manual_curation mRNA 29187413 29193542 . + . ID=GSCOCT00032371001;Parent=GSCOCG00032371001;Name=Cc11_g12010 | |
| 68462 chr11 manual_curation polypeptide 29187683 29193282 . + . ID=GSCOCP00032371001;Dbxref=InterPro:IPR004843,InterPro:IPR008963,PFAM:PF00149,SUPERFAMILY:SSF49363,SwissProt:Q5MAU8,SwissProt:Q8H1R2,SwissProt:Q9LMX4,TAIR:AT1G13750.1,TAIR:AT4G24890.1,TAIR:AT5G50400.1,TrEMBL:B9HXJ3,TrEMBL:B9RED8,TrEMBL:D7T9W8;Derives_from=GSCOCT00032371001;Name=Cc11_g12010;Ontology_term=CC_evidence_code:ISS,GO:0003993,GO:0016787,GO:0046872,CC_EC_number:missing_EC_number,CC_EC_number:missing_EC_number,PRODUCT:Probable inactive purple acid phosphatase 1,CC_functional_completeness:complete,CC_gene:PAP1,CC_gene:PAP27,CC_gene:PAP24;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032371001~ Probable inactive purple acid phosphatase 1~ PAP1~ complete;original_location=complement(join(2154816..2154983%2C2154618..2154709%2C2154355..2154421%2C2154126..2154248%2C2153151..2153243%2C2152735..2152864%2C2152100..2152181%2C2151620..2151752%2C2151094..2151299%2C2150876..2151001%2C2149998..2150307%2C2149384..2149695));owner=coffea | |
| 68463 chr11 manual_curation exon 29192971 29193542 . + . Parent=GSCOCT00032371001 | |
| 68464 chr11 manual_curation exon 29192359 29192668 . + . Parent=GSCOCT00032371001 | |
| 68465 chr11 manual_curation exon 29191665 29191790 . + . Parent=GSCOCT00032371001 | |
| 68466 chr11 manual_curation exon 29191367 29191572 . + . Parent=GSCOCT00032371001 | |
| 68467 chr11 manual_curation exon 29190914 29191046 . + . Parent=GSCOCT00032371001 | |
| 68468 chr11 manual_curation exon 29190485 29190566 . + . Parent=GSCOCT00032371001 | |
| 68469 chr11 manual_curation exon 29189802 29189931 . + . Parent=GSCOCT00032371001 | |
| 68470 chr11 manual_curation exon 29189423 29189515 . + . Parent=GSCOCT00032371001 | |
| 68471 chr11 manual_curation exon 29188418 29188540 . + . Parent=GSCOCT00032371001 | |
| 68472 chr11 manual_curation exon 29188245 29188311 . + . Parent=GSCOCT00032371001 | |
| 68473 chr11 manual_curation exon 29187957 29188048 . + . Parent=GSCOCT00032371001 | |
| 68474 chr11 manual_curation exon 29187413 29187850 . + . Parent=GSCOCT00032371001 | |
| 68475 chr11 manual_curation CDS 29192971 29193282 . + 0 Parent=GSCOCT00032371001 | |
| 68476 chr11 manual_curation CDS 29192359 29192668 . + 2 Parent=GSCOCT00032371001 | |
| 68477 chr11 manual_curation CDS 29191665 29191790 . + 2 Parent=GSCOCT00032371001 | |
| 68478 chr11 manual_curation CDS 29191367 29191572 . + 0 Parent=GSCOCT00032371001 | |
| 68479 chr11 manual_curation CDS 29190914 29191046 . + 2 Parent=GSCOCT00032371001 | |
| 68480 chr11 manual_curation CDS 29190485 29190566 . + 1 Parent=GSCOCT00032371001 | |
| 68481 chr11 manual_curation CDS 29189802 29189931 . + 0 Parent=GSCOCT00032371001 | |
| 68482 chr11 manual_curation CDS 29189423 29189515 . + 0 Parent=GSCOCT00032371001 | |
| 68483 chr11 manual_curation CDS 29188418 29188540 . + 0 Parent=GSCOCT00032371001 | |
| 68484 chr11 manual_curation CDS 29188245 29188311 . + 2 Parent=GSCOCT00032371001 | |
| 68485 chr11 manual_curation CDS 29187957 29188048 . + 0 Parent=GSCOCT00032371001 | |
| 68486 chr11 manual_curation CDS 29187683 29187850 . + 0 Parent=GSCOCT00032371001 | |
| 68487 chr11 manual_curation gene 29193712 29198730 . + . ID=GSCOCG00032370001;Name=Cc11_g12020 | |
| 68488 chr11 manual_curation mRNA 29193712 29198730 . + . ID=GSCOCT00032370001;Parent=GSCOCG00032370001;Name=Cc11_g12020 | |
| 68489 chr11 manual_curation polypeptide 29194409 29198730 . + . ID=GSCOCP00032370001;Dbxref=InterPro:IPR004843,InterPro:IPR008963,PFAM:PF00149,SUPERFAMILY:SSF49363,SwissProt:Q5MAU8,SwissProt:Q8H1R2,SwissProt:Q9LMX4,TAIR:AT1G13750.1,TAIR:AT4G24890.1,TAIR:AT5G50400.1,TrEMBL:B9HXJ3,TrEMBL:B9RED8,TrEMBL:D7T9W8;Derives_from=GSCOCT00032370001;Name=Cc11_g12020;Ontology_term=CC_evidence_code:ISS,GO:0003993,GO:0016787,GO:0046872,CC_EC_number:missing_EC_number,CC_EC_number:missing_EC_number,PRODUCT:Probable inactive purple acid phosphatase 1,CC_functional_completeness:complete,CC_gene:PAP1,CC_gene:PAP27,CC_gene:PAP24;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032370001~ Probable inactive purple acid phosphatase 1~ PAP1~ complete;original_location=complement(join(2148090..2148257%2C2147765..2147856%2C2147500..2147566%2C2147273..2147395%2C2146863..2146955%2C2146424..2146553%2C2145966..2146047%2C2145686..2145818%2C2145287..2145492%2C2145074..2145199%2C2144455..2144764%2C2143936..2144241));owner=coffea | |
| 68490 chr11 manual_curation exon 29198425 29198730 . + . Parent=GSCOCT00032370001 | |
| 68491 chr11 manual_curation exon 29197902 29198211 . + . Parent=GSCOCT00032370001 | |
| 68492 chr11 manual_curation exon 29197467 29197592 . + . Parent=GSCOCT00032370001 | |
| 68493 chr11 manual_curation exon 29197174 29197379 . + . Parent=GSCOCT00032370001 | |
| 68494 chr11 manual_curation exon 29196848 29196980 . + . Parent=GSCOCT00032370001 | |
| 68495 chr11 manual_curation exon 29196619 29196700 . + . Parent=GSCOCT00032370001 | |
| 68496 chr11 manual_curation exon 29196113 29196242 . + . Parent=GSCOCT00032370001 | |
| 68497 chr11 manual_curation exon 29195711 29195803 . + . Parent=GSCOCT00032370001 | |
| 68498 chr11 manual_curation exon 29195271 29195393 . + . Parent=GSCOCT00032370001 | |
| 68499 chr11 manual_curation exon 29195100 29195166 . + . Parent=GSCOCT00032370001 | |
| 68500 chr11 manual_curation exon 29194810 29194901 . + . Parent=GSCOCT00032370001 | |
| 68501 chr11 manual_curation exon 29193712 29194576 . + . Parent=GSCOCT00032370001 | |
| 68502 chr11 manual_curation CDS 29198425 29198730 . + 0 Parent=GSCOCT00032370001 | |
| 68503 chr11 manual_curation CDS 29197902 29198211 . + 2 Parent=GSCOCT00032370001 | |
| 68504 chr11 manual_curation CDS 29197467 29197592 . + 2 Parent=GSCOCT00032370001 | |
| 68505 chr11 manual_curation CDS 29197174 29197379 . + 0 Parent=GSCOCT00032370001 | |
| 68506 chr11 manual_curation CDS 29196848 29196980 . + 2 Parent=GSCOCT00032370001 | |
| 68507 chr11 manual_curation CDS 29196619 29196700 . + 1 Parent=GSCOCT00032370001 | |
| 68508 chr11 manual_curation CDS 29196113 29196242 . + 0 Parent=GSCOCT00032370001 | |
| 68509 chr11 manual_curation CDS 29195711 29195803 . + 0 Parent=GSCOCT00032370001 | |
| 68510 chr11 manual_curation CDS 29195271 29195393 . + 0 Parent=GSCOCT00032370001 | |
| 68511 chr11 manual_curation CDS 29195100 29195166 . + 2 Parent=GSCOCT00032370001 | |
| 68512 chr11 manual_curation CDS 29194810 29194901 . + 0 Parent=GSCOCT00032370001 | |
| 68513 chr11 manual_curation CDS 29194409 29194576 . + 0 Parent=GSCOCT00032370001 | |
| 68514 chr11 manual_curation gene 29198818 29200571 . - . ID=GSCOCG00032369001;Name=Cc11_g12030 | |
| 68515 chr11 manual_curation mRNA 29198818 29200571 . - . ID=GSCOCT00032369001;Parent=GSCOCG00032369001;Name=Cc11_g12030 | |
| 68516 chr11 manual_curation polypeptide 29199366 29200400 . - . ID=GSCOCP00032369001;Dbxref=InterPro:IPR015706,PANTHER:PTHR19446,SwissProt:P0C2F6,SwissProt:P93295,TAIR:AT2G02650.1,TAIR:AT3G09510.1,TAIR:AT4G29090.1,TrEMBL:D9ZHD0,TrEMBL:F4NCI4,TrEMBL:Q9SHP2;Derives_from=GSCOCT00032369001;Name=Cc11_g12030;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Ribonuclease H-like superfamily protein,CC_functional_completeness:fragment,CC_gene:AtMg00310,CC_gene:At1g65750;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032369001~ Putative Ribonuclease H-like superfamily protein~ AtMg00310~ fragment;original_location=2142266..2143300;owner=coffea | |
| 68517 chr11 manual_curation exon 29198818 29200571 . - . Parent=GSCOCT00032369001 | |
| 68518 chr11 manual_curation CDS 29199366 29200400 . - 0 Parent=GSCOCT00032369001 | |
| 68519 chr11 manual_curation gene 29200943 29205607 . - . ID=GSCOCG00032368001;Name=Cc11_g12040 | |
| 68520 chr11 manual_curation mRNA 29200943 29205607 . - . ID=GSCOCT00032368001;Parent=GSCOCG00032368001;Name=Cc11_g12040 | |
| 68521 chr11 manual_curation polypeptide 29201160 29205409 . - . ID=GSCOCP00032368001;Dbxref=InterPro:IPR001107,PFAM:PF01145,SMART:SM00244,SwissProt:O94905,SwissProt:Q5R7C5,SwissProt:Q6DKC0,TAIR:AT2G03510.1,TrEMBL:B9HXJ6,TrEMBL:B9REE7,TrEMBL:D7T9W2;Derives_from=GSCOCT00032368001;Name=Cc11_g12040;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Erlin-2-B,CC_functional_completeness:complete,CC_gene:erlin2-b,CC_gene:ERLIN2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032368001~ Erlin-2-B~ erlin2-b~ complete;original_location=join(2137257..2137379%2C2139269..2139401%2C2139521..2139588%2C2139707..2139766%2C2139858..2140016%2C2140336..2140482%2C2140933..2141147%2C2141245..2141353%2C2141429..2141506);owner=coffea | |
| 68522 chr11 manual_curation exon 29205287 29205607 . - . Parent=GSCOCT00032368001 | |
| 68523 chr11 manual_curation exon 29203265 29203397 . - . Parent=GSCOCT00032368001 | |
| 68524 chr11 manual_curation exon 29203078 29203145 . - . Parent=GSCOCT00032368001 | |
| 68525 chr11 manual_curation exon 29202900 29202959 . - . Parent=GSCOCT00032368001 | |
| 68526 chr11 manual_curation exon 29202650 29202808 . - . Parent=GSCOCT00032368001 | |
| 68527 chr11 manual_curation exon 29202184 29202330 . - . Parent=GSCOCT00032368001 | |
| 68528 chr11 manual_curation exon 29201519 29201733 . - . Parent=GSCOCT00032368001 | |
| 68529 chr11 manual_curation exon 29201313 29201421 . - . Parent=GSCOCT00032368001 | |
| 68530 chr11 manual_curation exon 29200943 29201237 . - . Parent=GSCOCT00032368001 | |
| 68531 chr11 manual_curation CDS 29205287 29205409 . - 0 Parent=GSCOCT00032368001 | |
| 68532 chr11 manual_curation CDS 29203265 29203397 . - 0 Parent=GSCOCT00032368001 | |
| 68533 chr11 manual_curation CDS 29203078 29203145 . - 1 Parent=GSCOCT00032368001 | |
| 68534 chr11 manual_curation CDS 29202900 29202959 . - 0 Parent=GSCOCT00032368001 | |
| 68535 chr11 manual_curation CDS 29202650 29202808 . - 0 Parent=GSCOCT00032368001 | |
| 68536 chr11 manual_curation CDS 29202184 29202330 . - 0 Parent=GSCOCT00032368001 | |
| 68537 chr11 manual_curation CDS 29201519 29201733 . - 0 Parent=GSCOCT00032368001 | |
| 68538 chr11 manual_curation CDS 29201313 29201421 . - 2 Parent=GSCOCT00032368001 | |
| 68539 chr11 manual_curation CDS 29201160 29201237 . - 0 Parent=GSCOCT00032368001 | |
| 68540 chr11 manual_curation gene 29209639 29210607 . - . ID=GSCOCG00032367001;Name=Cc11_g12050 | |
| 68541 chr11 manual_curation mRNA 29209639 29210607 . - . ID=GSCOCT00032367001;Parent=GSCOCG00032367001;Name=Cc11_g12050 | |
| 68542 chr11 manual_curation polypeptide 29209639 29210607 . - . ID=GSCOCP00032367001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q0WVK7,SwissProt:Q3EDF8,SwissProt:Q9SXD1,TAIR:AT1G05670.1,TAIR:AT1G09900.1,TAIR:AT1G62670.1,TIGRFAMs:TIGR00756,TrEMBL:B9MV37,TrEMBL:B9SKG1,TrEMBL:F6GVD9;Derives_from=GSCOCT00032367001;Name=Cc11_g12050;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Pentatricopeptide repeat-containing protein At1g62670%2C mitochondrial,CC_functional_completeness:complete,CC_gene:At1g62670,CC_gene:At1g09900,CC_gene:At1g05670;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032367001~ Putative Pentatricopeptide repeat-containing protein At1g62670%2C mitochondrial~ At1g62670~ complete;original_location=2132059..2133027;owner=coffea | |
| 68543 chr11 manual_curation exon 29209639 29210607 . - . Parent=GSCOCT00032367001 | |
| 68544 chr11 manual_curation CDS 29209639 29210607 . - 0 Parent=GSCOCT00032367001 | |
| 68545 chr11 manual_curation gene 29211444 29216341 . + . ID=GSCOCG00032365001;Name=Cc11_g12060 | |
| 68546 chr11 manual_curation mRNA 29211444 29216341 . + . ID=GSCOCT00032365001;Parent=GSCOCG00032365001;Name=Cc11_g12060 | |
| 68547 chr11 manual_curation polypeptide 29211530 29216341 . + . ID=GSCOCP00032365001;Dbxref=InterPro:IPR000073,InterPro:IPR000639,PFAM:PF00561,PRINTS:PR00111,PRINTS:PR00412,TAIR:AT1G13820.1,TAIR:AT4G36530.2,TAIR:AT5G39220.1,TrEMBL:B9HXJ7,TrEMBL:B9REE8,TrEMBL:G7JHI3;Derives_from=GSCOCT00032365001;Name=Cc11_g12060;Ontology_term=CC_evidence_code:ISS,GO:0003824,CC_EC_number:3.4.11.5,PRODUCT:alpha/beta-Hydrolases superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032365001~ alpha/beta-Hydrolases superfamily protein~ unknown_gene~ complete;original_location=complement(join(2130903..2131136%2C2129588..2129682%2C2129411..2129508%2C2129236..2129285%2C2128604..2128699%2C2128382..2128471%2C2127507..2127599%2C2127236..2127331%2C2126605..2126670%2C2126325..2126438));owner=coffea | |
| 68548 chr11 manual_curation exon 29216228 29216341 . + . Parent=GSCOCT00032365001 | |
| 68549 chr11 manual_curation exon 29215996 29216061 . + . Parent=GSCOCT00032365001 | |
| 68550 chr11 manual_curation exon 29215335 29215430 . + . Parent=GSCOCT00032365001 | |
| 68551 chr11 manual_curation exon 29215067 29215159 . + . Parent=GSCOCT00032365001 | |
| 68552 chr11 manual_curation exon 29214195 29214284 . + . Parent=GSCOCT00032365001 | |
| 68553 chr11 manual_curation exon 29213967 29214062 . + . Parent=GSCOCT00032365001 | |
| 68554 chr11 manual_curation exon 29213381 29213430 . + . Parent=GSCOCT00032365001 | |
| 68555 chr11 manual_curation exon 29213158 29213255 . + . Parent=GSCOCT00032365001 | |
| 68556 chr11 manual_curation exon 29212984 29213078 . + . Parent=GSCOCT00032365001 | |
| 68557 chr11 manual_curation exon 29211444 29211763 . + . Parent=GSCOCT00032365001 | |
| 68558 chr11 manual_curation CDS 29216228 29216341 . + 0 Parent=GSCOCT00032365001 | |
| 68559 chr11 manual_curation CDS 29215996 29216061 . + 0 Parent=GSCOCT00032365001 | |
| 68560 chr11 manual_curation CDS 29215335 29215430 . + 0 Parent=GSCOCT00032365001 | |
| 68561 chr11 manual_curation CDS 29215067 29215159 . + 0 Parent=GSCOCT00032365001 | |
| 68562 chr11 manual_curation CDS 29214195 29214284 . + 0 Parent=GSCOCT00032365001 | |
| 68563 chr11 manual_curation CDS 29213967 29214062 . + 0 Parent=GSCOCT00032365001 | |
| 68564 chr11 manual_curation CDS 29213381 29213430 . + 1 Parent=GSCOCT00032365001 | |
| 68565 chr11 manual_curation CDS 29213158 29213255 . + 2 Parent=GSCOCT00032365001 | |
| 68566 chr11 manual_curation CDS 29212984 29213078 . + 0 Parent=GSCOCT00032365001 | |
| 68567 chr11 manual_curation CDS 29211530 29211763 . + 0 Parent=GSCOCT00032365001 | |
| 68568 chr11 manual_curation gene 29216987 29219181 . - . ID=GSCOCG00032363001;Name=Cc11_g12070 | |
| 68569 chr11 manual_curation mRNA 29216987 29219181 . - . ID=GSCOCT00032363001;Parent=GSCOCG00032363001;Name=Cc11_g12070 | |
| 68570 chr11 manual_curation polypeptide 29217368 29219000 . - . ID=GSCOCP00032363001;Dbxref=InterPro:IPR012946,PFAM:PF07983,SMART:SM00768,SwissProt:Q93V72,SwissProt:Q9FNQ2,SwissProt:Q9SD84,TAIR:AT1G18650.1,TAIR:AT5G08000.1,TAIR:AT5G61130.1,TrEMBL:C6SXT0,TrEMBL:C6TG21,TrEMBL:I1JED8;Derives_from=GSCOCT00032363001;Name=Cc11_g12070;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Glucan endo-1%2C3-beta-glucosidase-like protein 3,CC_functional_completeness:complete,CC_gene:At5g61130,CC_gene:At5g08000,CC_gene:At1g69295;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032363001~ Putative Glucan endo-1%2C3-beta-glucosidase-like protein 3~ At5g61130~ complete;original_location=join(2123666..2123720%2C2123880..2124119%2C2124252..2124288%2C2125034..2125298);owner=coffea | |
| 68571 chr11 manual_curation exon 29218946 29219181 . - . Parent=GSCOCT00032363001 | |
| 68572 chr11 manual_curation exon 29218547 29218786 . - . Parent=GSCOCT00032363001 | |
| 68573 chr11 manual_curation exon 29218378 29218414 . - . Parent=GSCOCT00032363001 | |
| 68574 chr11 manual_curation exon 29216987 29217632 . - . Parent=GSCOCT00032363001 | |
| 68575 chr11 manual_curation CDS 29218946 29219000 . - 0 Parent=GSCOCT00032363001 | |
| 68576 chr11 manual_curation CDS 29218547 29218786 . - 1 Parent=GSCOCT00032363001 | |
| 68577 chr11 manual_curation CDS 29218378 29218414 . - 1 Parent=GSCOCT00032363001 | |
| 68578 chr11 manual_curation CDS 29217368 29217632 . - 2 Parent=GSCOCT00032363001 | |
| 68579 chr11 manual_curation gene 29224383 29228524 . + . ID=GSCOCG00032362001;Name=Cc11_g12080 | |
| 68580 chr11 manual_curation mRNA 29224383 29228524 . + . ID=GSCOCT00032362001;Parent=GSCOCG00032362001;Name=Cc11_g12080 | |
| 68581 chr11 manual_curation polypeptide 29224383 29227894 . + . ID=GSCOCP00032362001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q9FIX3,SwissProt:Q9FZD1,SwissProt:Q9M302,TAIR:AT1G26460.1,TAIR:AT3G48810.1,TAIR:AT5G39710.1,TIGRFAMs:TIGR00756,TrEMBL:B9REF1,TrEMBL:D7KQQ2,TrEMBL:D7T9V9;Derives_from=GSCOCT00032362001;Name=Cc11_g12080;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At1g26460%2C mitochondrial,CC_functional_completeness:complete,CC_gene:At1g26460,CC_gene:EMB2745,CC_gene:At3g48810;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032362001~ Pentatricopeptide repeat-containing protein At1g26460%2C mitochondrial~ At1g26460~ complete;original_location=complement(join(2117616..2118283%2C2116613..2116844%2C2116047..2116529%2C2115545..2115751%2C2115057..2115194%2C2114772..2114957));owner=coffea | |
| 68582 chr11 manual_curation exon 29227709 29228524 . + . Parent=GSCOCT00032362001 | |
| 68583 chr11 manual_curation exon 29227472 29227609 . + . Parent=GSCOCT00032362001 | |
| 68584 chr11 manual_curation exon 29226915 29227121 . + . Parent=GSCOCT00032362001 | |
| 68585 chr11 manual_curation exon 29226137 29226619 . + . Parent=GSCOCT00032362001 | |
| 68586 chr11 manual_curation exon 29225822 29226053 . + . Parent=GSCOCT00032362001 | |
| 68587 chr11 manual_curation exon 29224383 29225050 . + . Parent=GSCOCT00032362001 | |
| 68588 chr11 manual_curation CDS 29227709 29227894 . + 0 Parent=GSCOCT00032362001 | |
| 68589 chr11 manual_curation CDS 29227472 29227609 . + 0 Parent=GSCOCT00032362001 | |
| 68590 chr11 manual_curation CDS 29226915 29227121 . + 0 Parent=GSCOCT00032362001 | |
| 68591 chr11 manual_curation CDS 29226137 29226619 . + 0 Parent=GSCOCT00032362001 | |
| 68592 chr11 manual_curation CDS 29225822 29226053 . + 2 Parent=GSCOCT00032362001 | |
| 68593 chr11 manual_curation CDS 29224383 29225050 . + 0 Parent=GSCOCT00032362001 | |
| 68594 chr11 manual_curation gene 29228900 29231470 . - . ID=GSCOCG00032361001;Name=Cc11_g12090 | |
| 68595 chr11 manual_curation mRNA 29228900 29231470 . - . ID=GSCOCT00032361001;Parent=GSCOCG00032361001;Name=Cc11_g12090 | |
| 68596 chr11 manual_curation polypeptide 29229485 29231470 . - . ID=GSCOCP00032361001;Dbxref=InterPro:IPR004853,PFAM:PF03151,SwissProt:P21727,SwissProt:P49132,SwissProt:Q9FTT3,TAIR:AT5G46110.4,TrEMBL:B9HIE0,TrEMBL:B9REF2,TrEMBL:G7JWT8;Derives_from=GSCOCT00032361001;Name=Cc11_g12090;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Triose phosphate/phosphate translocator%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:TPT;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032361001~ Putative Triose phosphate/phosphate translocator%2C chloroplastic~ TPT~ fragment;original_location=join(2111196..2111219%2C2112131..2112243%2C2112344..2112422%2C2112946..2113045%2C2113081..2113181);owner=coffea | |
| 68597 chr11 manual_curation exon 29231447 29231470 . - . Parent=GSCOCT00032361001 | |
| 68598 chr11 manual_curation exon 29230423 29230535 . - . Parent=GSCOCT00032361001 | |
| 68599 chr11 manual_curation exon 29230244 29230322 . - . Parent=GSCOCT00032361001 | |
| 68600 chr11 manual_curation exon 29229621 29229720 . - . Parent=GSCOCT00032361001 | |
| 68601 chr11 manual_curation exon 29228900 29229585 . - . Parent=GSCOCT00032361001 | |
| 68602 chr11 manual_curation CDS 29231447 29231470 . - 0 Parent=GSCOCT00032361001 | |
| 68603 chr11 manual_curation CDS 29230423 29230535 . - 0 Parent=GSCOCT00032361001 | |
| 68604 chr11 manual_curation CDS 29230244 29230322 . - 2 Parent=GSCOCT00032361001 | |
| 68605 chr11 manual_curation CDS 29229621 29229720 . - 0 Parent=GSCOCT00032361001 | |
| 68606 chr11 manual_curation CDS 29229485 29229585 . - 1 Parent=GSCOCT00032361001 | |
| 68607 chr11 manual_curation gene 29231553 29231959 . + . ID=GSCOCG00032360001;Name=Cc11_g12100 | |
| 68608 chr11 manual_curation mRNA 29231553 29231959 . + . ID=GSCOCT00032360001;Parent=GSCOCG00032360001;Name=Cc11_g12100 | |
| 68609 chr11 manual_curation polypeptide 29231553 29231959 . + . ID=GSCOCP00032360001;Derives_from=GSCOCT00032360001;Name=Cc11_g12100;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032360001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(2110934..2111113%2C2110707..2110838));owner=coffea | |
| 68610 chr11 manual_curation exon 29231828 29231959 . + . Parent=GSCOCT00032360001 | |
| 68611 chr11 manual_curation exon 29231553 29231732 . + . Parent=GSCOCT00032360001 | |
| 68612 chr11 manual_curation CDS 29231828 29231959 . + 0 Parent=GSCOCT00032360001 | |
| 68613 chr11 manual_curation CDS 29231553 29231732 . + 0 Parent=GSCOCT00032360001 | |
| 68614 chr11 manual_curation gene 29232186 29233673 . + . ID=GSCOCG00032359001;Name=Cc11_g12110 | |
| 68615 chr11 manual_curation mRNA 29232186 29233673 . + . ID=GSCOCT00032359001;Parent=GSCOCG00032359001;Name=Cc11_g12110 | |
| 68616 chr11 manual_curation polypeptide 29232186 29233413 . + . ID=GSCOCP00032359001;Dbxref=InterPro:IPR012423,PFAM:PF07904,TAIR:AT1G26470.1,TrEMBL:B9HID9,TrEMBL:B9HXK1,TrEMBL:B9REF3;Derives_from=GSCOCT00032359001;Name=Cc11_g12110;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0043189,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Predicted protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032359001~ Predicted protein~ unknown_gene~ modules;original_location=complement(join(2110432..2110480%2C2109830..2109881%2C2109677..2109746%2C2109253..2109339));owner=coffea | |
| 68617 chr11 manual_curation exon 29233327 29233673 . + . Parent=GSCOCT00032359001 | |
| 68618 chr11 manual_curation exon 29232920 29232989 . + . Parent=GSCOCT00032359001 | |
| 68619 chr11 manual_curation exon 29232785 29232836 . + . Parent=GSCOCT00032359001 | |
| 68620 chr11 manual_curation exon 29232186 29232234 . + . Parent=GSCOCT00032359001 | |
| 68621 chr11 manual_curation CDS 29233327 29233413 . + 0 Parent=GSCOCT00032359001 | |
| 68622 chr11 manual_curation CDS 29232920 29232989 . + 2 Parent=GSCOCT00032359001 | |
| 68623 chr11 manual_curation CDS 29232785 29232836 . + 1 Parent=GSCOCT00032359001 | |
| 68624 chr11 manual_curation CDS 29232186 29232234 . + 0 Parent=GSCOCT00032359001 | |
| 68625 chr11 manual_curation gene 29236118 29237669 . - . ID=GSCOCG00032358001;Name=Cc11_g12120 | |
| 68626 chr11 manual_curation mRNA 29236118 29237669 . - . ID=GSCOCT00032358001;Parent=GSCOCG00032358001;Name=Cc11_g12120 | |
| 68627 chr11 manual_curation polypeptide 29236118 29237669 . - . ID=GSCOCP00032358001;Dbxref=GENE3D:G3DSA:1.20.190.20,InterPro:IPR000308,PANTHER:PTHR18860,PFAM:PF00244,PIR:PIRSF000868,PRINTS:PR00305,PROSITE:PS00796,PROSITE:PS00797,SMART:SM00101,SUPERFAMILY:SSF48445,SwissProt:P93212,SwissProt:Q96453,SwissProt:Q9C5W6,TAIR:AT1G26480.1,TAIR:AT1G34760.1,TAIR:AT2G42590.3,TrEMBL:C6TCU1,TrEMBL:E9KNA7,TrEMBL:I1KMD3;Derives_from=GSCOCT00032358001;Name=Cc11_g12120;Ontology_term=CC_evidence_code:ISS,GO:0019904,CC_EC_number:missing_EC_number,PRODUCT:14-3-3-like protein GF14 iota,CC_functional_completeness:complete,CC_gene:GRF12,CC_gene:TFT7,CC_gene:GF14D;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032358001~ 14-3-3-like protein GF14 iota~ GRF12~ complete;original_location=join(2104997..2105069%2C2105508..2105814%2C2105977..2106082%2C2106181..2106290%2C2106383..2106548);owner=coffea | |
| 68628 chr11 manual_curation exon 29237597 29237669 . - . Parent=GSCOCT00032358001 | |
| 68629 chr11 manual_curation exon 29236852 29237158 . - . Parent=GSCOCT00032358001 | |
| 68630 chr11 manual_curation exon 29236584 29236689 . - . Parent=GSCOCT00032358001 | |
| 68631 chr11 manual_curation exon 29236376 29236485 . - . Parent=GSCOCT00032358001 | |
| 68632 chr11 manual_curation exon 29236118 29236283 . - . Parent=GSCOCT00032358001 | |
| 68633 chr11 manual_curation CDS 29237597 29237669 . - 0 Parent=GSCOCT00032358001 | |
| 68634 chr11 manual_curation CDS 29236852 29237158 . - 1 Parent=GSCOCT00032358001 | |
| 68635 chr11 manual_curation CDS 29236584 29236689 . - 2 Parent=GSCOCT00032358001 | |
| 68636 chr11 manual_curation CDS 29236376 29236485 . - 0 Parent=GSCOCT00032358001 | |
| 68637 chr11 manual_curation CDS 29236118 29236283 . - 2 Parent=GSCOCT00032358001 | |
| 68638 chr11 manual_curation gene 29238870 29240408 . + . ID=GSCOCG00032357001;Name=Cc11_g12130 | |
| 68639 chr11 manual_curation mRNA 29238870 29240408 . + . ID=GSCOCT00032357001;Parent=GSCOCG00032357001;Name=Cc11_g12130 | |
| 68640 chr11 manual_curation polypeptide 29238870 29240408 . + . ID=GSCOCP00032357001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q3EAF8,SwissProt:Q9FZD4,SwissProt:Q9LZP3,TAIR:AT1G26500.1,TAIR:AT3G62470.1,TAIR:AT3G62540.1,TIGRFAMs:TIGR00756,TrEMBL:F6HFU4,TrEMBL:G7JWT0,TrEMBL:I1J5Z3;Derives_from=GSCOCT00032357001;Name=Cc11_g12130;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative pentatricopeptide repeat-containing protein At1g26500,CC_functional_completeness:complete,CC_gene:At1g26500,CC_gene:At3g62470,CC_gene:At3g62540;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032357001~ Putative pentatricopeptide repeat-containing protein At1g26500~ At1g26500~ complete;original_location=complement(2102258..2103796);owner=coffea | |
| 68641 chr11 manual_curation exon 29238870 29240408 . + . Parent=GSCOCT00032357001 | |
| 68642 chr11 manual_curation CDS 29238870 29240408 . + 0 Parent=GSCOCT00032357001 | |
| 68643 chr11 manual_curation gene 29241011 29246925 . - . ID=GSCOCG00032356001;Name=Cc11_g12140 | |
| 68644 chr11 manual_curation mRNA 29241011 29246925 . - . ID=GSCOCT00032356001;Parent=GSCOCG00032356001;Name=Cc11_g12140 | |
| 68645 chr11 manual_curation polypeptide 29241661 29245884 . - . ID=GSCOCP00032356001;Dbxref=InterPro:IPR004159,PFAM:PF03141,SwissProt:Q3EC77,SwissProt:Q8GYW9,SwissProt:Q9C9Q8,TAIR:AT1G13860.4,TAIR:AT1G78240.1,TAIR:AT2G03480.1,TrEMBL:B9HXK3,TrEMBL:B9REF5,TrEMBL:F6HF73;Derives_from=GSCOCT00032356001;Name=Cc11_g12140;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Probable methyltransferase PMT5,CC_functional_completeness:complete,CC_gene:At2g03480,CC_gene:At1g13860,CC_gene:QUA2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032356001~ Probable methyltransferase PMT5~ At2g03480~ complete;original_location=join(2096782..2097281%2C2097502..2097631%2C2097803..2098043%2C2098850..2099075%2C2099311..2099469%2C2099543..2099553%2C2099604..2099904%2C2100465..2100597%2C2100856..2101005);owner=coffea | |
| 68646 chr11 manual_curation exon 29246540 29246925 . - . Parent=GSCOCT00032356001 | |
| 68647 chr11 manual_curation exon 29241011 29241402 . - . Parent=GSCOCT00032356001 | |
| 68648 chr11 manual_curation exon 29245385 29246297 . - . Parent=GSCOCT00032356001 | |
| 68649 chr11 manual_curation exon 29245035 29245164 . - . Parent=GSCOCT00032356001 | |
| 68650 chr11 manual_curation exon 29244623 29244863 . - . Parent=GSCOCT00032356001 | |
| 68651 chr11 manual_curation exon 29243591 29243816 . - . Parent=GSCOCT00032356001 | |
| 68652 chr11 manual_curation exon 29243197 29243355 . - . Parent=GSCOCT00032356001 | |
| 68653 chr11 manual_curation exon 29243113 29243123 . - . Parent=GSCOCT00032356001 | |
| 68654 chr11 manual_curation exon 29242762 29243062 . - . Parent=GSCOCT00032356001 | |
| 68655 chr11 manual_curation exon 29242069 29242201 . - . Parent=GSCOCT00032356001 | |
| 68656 chr11 manual_curation exon 29241607 29241810 . - . Parent=GSCOCT00032356001 | |
| 68657 chr11 manual_curation CDS 29245385 29245884 . - 0 Parent=GSCOCT00032356001 | |
| 68658 chr11 manual_curation CDS 29245035 29245164 . - 2 Parent=GSCOCT00032356001 | |
| 68659 chr11 manual_curation CDS 29244623 29244863 . - 0 Parent=GSCOCT00032356001 | |
| 68660 chr11 manual_curation CDS 29243591 29243816 . - 1 Parent=GSCOCT00032356001 | |
| 68661 chr11 manual_curation CDS 29243197 29243355 . - 2 Parent=GSCOCT00032356001 | |
| 68662 chr11 manual_curation CDS 29243113 29243123 . - 2 Parent=GSCOCT00032356001 | |
| 68663 chr11 manual_curation CDS 29242762 29243062 . - 1 Parent=GSCOCT00032356001 | |
| 68664 chr11 manual_curation CDS 29242069 29242201 . - 2 Parent=GSCOCT00032356001 | |
| 68665 chr11 manual_curation CDS 29241661 29241810 . - 0 Parent=GSCOCT00032356001 | |
| 68666 chr11 manual_curation gene 29250039 29252824 . - . ID=GSCOCG00032355001;Name=Cc11_g12150 | |
| 68667 chr11 manual_curation mRNA 29250039 29252824 . - . ID=GSCOCT00032355001;Parent=GSCOCG00032355001;Name=Cc11_g12150 | |
| 68668 chr11 manual_curation polypeptide 29250546 29251451 . - . ID=GSCOCP00032355001;Dbxref=InterPro:IPR013641,PFAM:PF08433,SwissProt:Q0P457,SwissProt:Q4KLF3,SwissProt:Q9P7V4,TAIR:AT1G13870.1,TrEMBL:B9REF6,TrEMBL:F6HF74,TrEMBL:I1KIA5;Derives_from=GSCOCT00032355001;Name=Cc11_g12150;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein KTI12 homolog,CC_functional_completeness:complete,CC_gene:kti12;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032355001~ Putative Protein KTI12 homolog~ kti12~ complete;original_location=2091215..2092120;owner=coffea | |
| 68669 chr11 manual_curation exon 29252666 29252824 . - . Parent=GSCOCT00032355001 | |
| 68670 chr11 manual_curation exon 29250039 29251492 . - . Parent=GSCOCT00032355001 | |
| 68671 chr11 manual_curation CDS 29250546 29251451 . - 0 Parent=GSCOCT00032355001 | |
| 68672 chr11 manual_curation gene 29253181 29256709 . - . ID=GSCOCG00032354001;Name=Cc11_g12160 | |
| 68673 chr11 manual_curation mRNA 29253181 29256709 . - . ID=GSCOCT00032354001;Parent=GSCOCG00032354001;Name=Cc11_g12160 | |
| 68674 chr11 manual_curation polypeptide 29253464 29256662 . - . ID=GSCOCP00032354001;Dbxref=GENE3D:G3DSA:3.30.1220.10,InterPro:IPR003495,InterPro:IPR011629,PFAM:PF02492,PFAM:PF07683,SMART:SM00833,SUPERFAMILY:SSF90002,SwissProt:Q8IUF1,SwissProt:Q99MB4,SwissProt:Q9BRT8,TAIR:AT1G15730.1,TAIR:AT1G26520.1,TAIR:AT1G80480.1,TrEMBL:B9HID1,TrEMBL:F6HF74,TrEMBL:G7JWS4;Derives_from=GSCOCT00032354001;Name=Cc11_g12160;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative COBW domain-containing protein 1,CC_functional_completeness:complete,CC_gene:Cbwd1,CC_gene:CBWD1,CC_gene:CBWD2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032354001~ Putative COBW domain-containing protein 1~ Cbwd1~ complete;original_location=join(2086004..2086144%2C2086259..2086476%2C2086955..2087069%2C2087341..2087430%2C2087611..2087784%2C2087901..2088020%2C2088350..2088460%2C2088955..2089036%2C2089138..2089202);owner=coffea | |
| 68675 chr11 manual_curation exon 29256522 29256709 . - . Parent=GSCOCT00032354001 | |
| 68676 chr11 manual_curation exon 29256190 29256407 . - . Parent=GSCOCT00032354001 | |
| 68677 chr11 manual_curation exon 29255597 29255711 . - . Parent=GSCOCT00032354001 | |
| 68678 chr11 manual_curation exon 29255236 29255325 . - . Parent=GSCOCT00032354001 | |
| 68679 chr11 manual_curation exon 29254882 29255055 . - . Parent=GSCOCT00032354001 | |
| 68680 chr11 manual_curation exon 29254646 29254765 . - . Parent=GSCOCT00032354001 | |
| 68681 chr11 manual_curation exon 29254206 29254316 . - . Parent=GSCOCT00032354001 | |
| 68682 chr11 manual_curation exon 29253630 29253711 . - . Parent=GSCOCT00032354001 | |
| 68683 chr11 manual_curation exon 29253181 29253528 . - . Parent=GSCOCT00032354001 | |
| 68684 chr11 manual_curation CDS 29256522 29256662 . - 0 Parent=GSCOCT00032354001 | |
| 68685 chr11 manual_curation CDS 29256190 29256407 . - 0 Parent=GSCOCT00032354001 | |
| 68686 chr11 manual_curation CDS 29255597 29255711 . - 2 Parent=GSCOCT00032354001 | |
| 68687 chr11 manual_curation CDS 29255236 29255325 . - 0 Parent=GSCOCT00032354001 | |
| 68688 chr11 manual_curation CDS 29254882 29255055 . - 0 Parent=GSCOCT00032354001 | |
| 68689 chr11 manual_curation CDS 29254646 29254765 . - 0 Parent=GSCOCT00032354001 | |
| 68690 chr11 manual_curation CDS 29254206 29254316 . - 0 Parent=GSCOCT00032354001 | |
| 68691 chr11 manual_curation CDS 29253630 29253711 . - 0 Parent=GSCOCT00032354001 | |
| 68692 chr11 manual_curation CDS 29253464 29253528 . - 1 Parent=GSCOCT00032354001 | |
| 68693 chr11 manual_curation gene 29259415 29266371 . + . ID=GSCOCG00032353001;Name=Cc11_g12170 | |
| 68694 chr11 manual_curation mRNA 29259415 29266371 . + . ID=GSCOCT00032353001;Parent=GSCOCG00032353001;Name=Cc11_g12170 | |
| 68695 chr11 manual_curation polypeptide 29259415 29266253 . + . ID=GSCOCP00032353001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR001360,InterPro:IPR013781,InterPro:IPR017853,InterPro:IPR018120,PANTHER:PTHR10353,PFAM:PF00232,PRINTS:PR00131,PROSITE:PS00653,SUPERFAMILY:SSF51445,SwissProt:Q339X2,SwissProt:Q8L7J2,SwissProt:Q9FZE0,TAIR:AT1G26560.1,TAIR:AT3G18080.1,TAIR:AT5G54570.1,TrEMBL:B9HID2,TrEMBL:B9REF8,TrEMBL:F6HF76;Derives_from=GSCOCT00032353001;Name=Cc11_g12170;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0043169,CC_EC_number:3.2.1.21,PRODUCT:Beta-glucosidase 40,CC_functional_completeness:complete,CC_gene:BGLU40,CC_gene:BGLU6,CC_gene:BGLU34;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032353001~ Beta-glucosidase 40~ BGLU40~ complete;original_location=complement(join(2083225..2083251%2C2081339..2081530%2C2079786..2079852%2C2079317..2079375%2C2079087..2079162%2C2078874..2078945%2C2078688..2078775%2C2078322..2078577%2C2078039..2078154%2C2077493..2077716%2C2077264..2077295%2C2077035..2077137%2C2076713..2076821%2C2076413..2076587));owner=coffea | |
| 68696 chr11 manual_curation exon 29266079 29266371 . + . Parent=GSCOCT00032353001 | |
| 68697 chr11 manual_curation exon 29265845 29265953 . + . Parent=GSCOCT00032353001 | |
| 68698 chr11 manual_curation exon 29265529 29265631 . + . Parent=GSCOCT00032353001 | |
| 68699 chr11 manual_curation exon 29265371 29265402 . + . Parent=GSCOCT00032353001 | |
| 68700 chr11 manual_curation exon 29264950 29265173 . + . Parent=GSCOCT00032353001 | |
| 68701 chr11 manual_curation exon 29264512 29264627 . + . Parent=GSCOCT00032353001 | |
| 68702 chr11 manual_curation exon 29264089 29264344 . + . Parent=GSCOCT00032353001 | |
| 68703 chr11 manual_curation exon 29263891 29263978 . + . Parent=GSCOCT00032353001 | |
| 68704 chr11 manual_curation exon 29263721 29263792 . + . Parent=GSCOCT00032353001 | |
| 68705 chr11 manual_curation exon 29263504 29263579 . + . Parent=GSCOCT00032353001 | |
| 68706 chr11 manual_curation exon 29263291 29263349 . + . Parent=GSCOCT00032353001 | |
| 68707 chr11 manual_curation exon 29262814 29262880 . + . Parent=GSCOCT00032353001 | |
| 68708 chr11 manual_curation exon 29261136 29261327 . + . Parent=GSCOCT00032353001 | |
| 68709 chr11 manual_curation exon 29259415 29259441 . + . Parent=GSCOCT00032353001 | |
| 68710 chr11 manual_curation CDS 29266079 29266253 . + 2 Parent=GSCOCT00032353001 | |
| 68711 chr11 manual_curation CDS 29265845 29265953 . + 1 Parent=GSCOCT00032353001 | |
| 68712 chr11 manual_curation CDS 29265529 29265631 . + 0 Parent=GSCOCT00032353001 | |
| 68713 chr11 manual_curation CDS 29265371 29265402 . + 1 Parent=GSCOCT00032353001 | |
| 68714 chr11 manual_curation CDS 29264950 29265173 . + 2 Parent=GSCOCT00032353001 | |
| 68715 chr11 manual_curation CDS 29264512 29264627 . + 0 Parent=GSCOCT00032353001 | |
| 68716 chr11 manual_curation CDS 29264089 29264344 . + 2 Parent=GSCOCT00032353001 | |
| 68717 chr11 manual_curation CDS 29263891 29263978 . + 1 Parent=GSCOCT00032353001 | |
| 68718 chr11 manual_curation CDS 29263721 29263792 . + 1 Parent=GSCOCT00032353001 | |
| 68719 chr11 manual_curation CDS 29263504 29263579 . + 0 Parent=GSCOCT00032353001 | |
| 68720 chr11 manual_curation CDS 29263291 29263349 . + 1 Parent=GSCOCT00032353001 | |
| 68721 chr11 manual_curation CDS 29262814 29262880 . + 0 Parent=GSCOCT00032353001 | |
| 68722 chr11 manual_curation CDS 29261136 29261327 . + 0 Parent=GSCOCT00032353001 | |
| 68723 chr11 manual_curation CDS 29259415 29259441 . + 0 Parent=GSCOCT00032353001 | |
| 68724 chr11 manual_curation gene 29306317 29310197 . + . ID=GSCOCG00032351001;Name=Cc11_g12180 | |
| 68725 chr11 manual_curation mRNA 29306317 29310197 . + . ID=GSCOCT00032351001;Parent=GSCOCG00032351001;Name=Cc11_g12180 | |
| 68726 chr11 manual_curation polypeptide 29308755 29310197 . + . ID=GSCOCP00032351001;Dbxref=GENE3D:G3DSA:1.10.1040.10,GENE3D:G3DSA:3.40.50.1870,GENE3D:G3DSA:3.40.50.720,InterPro:IPR001732,InterPro:IPR008927,InterPro:IPR013328,InterPro:IPR014026,InterPro:IPR014027,InterPro:IPR014028,InterPro:IPR016040,InterPro:IPR017476,PANTHER:PTHR11374,PFAM:PF00984,PFAM:PF03720,PFAM:PF03721,SUPERFAMILY:SSF48179,SUPERFAMILY:SSF52413,SwissProt:Q96558,SwissProt:Q9FM01,SwissProt:Q9LIA8,TAIR:AT3G29360.1,TAIR:AT5G15490.1,TAIR:AT5G39320.1,TIGRFAMs:TIGR03026,TrEMBL:B9REG0,TrEMBL:D2WK24,TrEMBL:F6HF82;Derives_from=GSCOCT00032351001;Name=Cc11_g12180;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,GO:0016491,GO:0050662,GO:0051287,GO:0055114,CC_EC_number:1.1.1.22,PRODUCT:UDP-glucose 6-dehydrogenase,CC_functional_completeness:complete,CC_gene:UGD1,CC_gene:UGD2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032351001~ UDP-glucose 6-dehydrogenase~ UGD1~ complete;original_location=complement(2032469..2033911);owner=coffea | |
| 68727 chr11 manual_curation exon 29306994 29307054 . + . Parent=GSCOCT00032351001 | |
| 68728 chr11 manual_curation exon 29306317 29306820 . + . Parent=GSCOCT00032351001 | |
| 68729 chr11 manual_curation exon 29308734 29310197 . + . Parent=GSCOCT00032351001 | |
| 68730 chr11 manual_curation CDS 29308755 29310197 . + 0 Parent=GSCOCT00032351001 | |
| 68731 chr11 manual_curation gene 29312063 29315667 . + . ID=GSCOCG00032349001;Name=Cc11_g12190 | |
| 68732 chr11 manual_curation mRNA 29312063 29315667 . + . ID=GSCOCT00032349001;Parent=GSCOCG00032349001;Name=Cc11_g12190 | |
| 68733 chr11 manual_curation polypeptide 29313730 29315667 . + . ID=GSCOCP00032349001;Dbxref=InterPro:IPR017877,PROFILE:PS50090,SwissProt:Q84JT7,SwissProt:Q9LDD4,TAIR:AT1G13880.1,TAIR:AT1G26580.1,TAIR:AT2G03470.1,TrEMBL:A5AF94,TrEMBL:B9HID4,TrEMBL:B9HXK5;Derives_from=GSCOCT00032349001;Name=Cc11_g12190;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative FUNCTIONS IN,CC_functional_completeness:fragment,CC_gene:ARID2,CC_gene:ARID1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032349001~ Putative FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B BEST Arabidopsis thaliana protein match is: ELM2 domain-containing protein (TAIR:AT2G03470.1)%3B Has 161 Blast hits to 161 proteins in 17 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 1%3B Fungi - 4%3B Plants - 156%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ ARID2~ fragment;original_location=complement(join(2028792..2028936%2C2027283..2028458%2C2026999..2027081));owner=coffea | |
| 68734 chr11 manual_curation exon 29312063 29312443 . + . Parent=GSCOCT00032349001 | |
| 68735 chr11 manual_curation exon 29315585 29315667 . + . Parent=GSCOCT00032349001 | |
| 68736 chr11 manual_curation exon 29314208 29315383 . + . Parent=GSCOCT00032349001 | |
| 68737 chr11 manual_curation exon 29313726 29313874 . + . Parent=GSCOCT00032349001 | |
| 68738 chr11 manual_curation CDS 29315585 29315667 . + 1 Parent=GSCOCT00032349001 | |
| 68739 chr11 manual_curation CDS 29314208 29315383 . + 1 Parent=GSCOCT00032349001 | |
| 68740 chr11 manual_curation CDS 29313730 29313874 . + 0 Parent=GSCOCT00032349001 | |
| 68741 chr11 manual_curation gene 29321470 29323143 . + . ID=GSCOCG00032347001;Name=Cc11_g12200 | |
| 68742 chr11 manual_curation mRNA 29321470 29323143 . + . ID=GSCOCT00032347001;Parent=GSCOCG00032347001;Name=Cc11_g12200 | |
| 68743 chr11 manual_curation polypeptide 29321470 29323143 . + . ID=GSCOCP00032347001;Dbxref=InterPro:IPR007087,InterPro:IPR015880,PROFILE:PS50157,PROSITE:PS00028,SMART:SM00355,SwissProt:Q39092,SwissProt:Q681X4,TAIR:AT1G02030.1,TAIR:AT1G26590.1,TAIR:AT1G26610.1,TrEMBL:F6HF80,TrEMBL:P93718,TrEMBL:P93719;Derives_from=GSCOCT00032347001;Name=Cc11_g12200;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative C2H2-like zinc finger protein,CC_functional_completeness:complete,CC_gene:ZAT1,CC_gene:ZAT5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032347001~ Putative C2H2-like zinc finger protein~ ZAT1~ complete;original_location=complement(2019523..2021196);owner=coffea | |
| 68744 chr11 manual_curation exon 29321470 29323143 . + . Parent=GSCOCT00032347001 | |
| 68745 chr11 manual_curation CDS 29321470 29323143 . + 0 Parent=GSCOCT00032347001 | |
| 68746 chr11 manual_curation gene 29328433 29334826 . - . ID=GSCOCG00032346001;Name=Cc11_g12210 | |
| 68747 chr11 manual_curation mRNA 29328433 29334826 . - . ID=GSCOCT00032346001;Parent=GSCOCG00032346001;Name=Cc11_g12210 | |
| 68748 chr11 manual_curation polypeptide 29331287 29334408 . - . ID=GSCOCP00032346001;Dbxref=InterPro:IPR003657,PFAM:PF03106,PROFILE:PS50811,SMART:SM00774,SwissProt:O22900,SwissProt:Q8VWJ2,SwissProt:Q9C983,TAIR:AT1G69310.1,TAIR:AT2G47260.1,TAIR:AT4G18170.1,TrEMBL:F6HF79,TrEMBL:I1J5Y5,TrEMBL:I1JEC8;Derives_from=GSCOCT00032346001;Name=Cc11_g12210;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0043565,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable WRKY transcription factor 57,CC_functional_completeness:complete,CC_gene:WRKY57,CC_gene:WRKY23,CC_gene:WRKY28;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032346001~ Putative Probable WRKY transcription factor 57~ WRKY57~ complete;original_location=join(2008258..2008486%2C2008550..2008658%2C2010301..2010444%2C2011019..2011379);owner=coffea | |
| 68749 chr11 manual_curation exon 29328783 29328905 . - . Parent=GSCOCT00032346001 | |
| 68750 chr11 manual_curation exon 29328433 29328677 . - . Parent=GSCOCT00032346001 | |
| 68751 chr11 manual_curation exon 29334180 29334826 . - . Parent=GSCOCT00032346001 | |
| 68752 chr11 manual_curation exon 29334008 29334116 . - . Parent=GSCOCT00032346001 | |
| 68753 chr11 manual_curation exon 29332222 29332365 . - . Parent=GSCOCT00032346001 | |
| 68754 chr11 manual_curation exon 29331280 29331647 . - . Parent=GSCOCT00032346001 | |
| 68755 chr11 manual_curation CDS 29334180 29334408 . - 0 Parent=GSCOCT00032346001 | |
| 68756 chr11 manual_curation CDS 29334008 29334116 . - 1 Parent=GSCOCT00032346001 | |
| 68757 chr11 manual_curation CDS 29332222 29332365 . - 2 Parent=GSCOCT00032346001 | |
| 68758 chr11 manual_curation CDS 29331287 29331647 . - 2 Parent=GSCOCT00032346001 | |
| 68759 chr11 manual_curation gene 29350360 29359084 . - . ID=GSCOCG00032345001;Name=Cc11_g12220 | |
| 68760 chr11 manual_curation mRNA 29350360 29359084 . - . ID=GSCOCT00032345001;Parent=GSCOCG00032345001;Name=Cc11_g12220 | |
| 68761 chr11 manual_curation polypeptide 29350830 29359084 . - . ID=GSCOCP00032345001;Dbxref=InterPro:IPR000811,InterPro:IPR011833,PANTHER:PTHR11468,PFAM:PF00343,PIR:PIRSF000460,PROSITE:PS00102,SwissProt:P04045,SwissProt:P53535,SwissProt:P53536,TAIR:AT3G29320.1,TAIR:AT3G46970.1,TIGRFAMs:TIGR02093,TrEMBL:B9HXL0,TrEMBL:B9RCW0,TrEMBL:F6HF78;Derives_from=GSCOCT00032345001;Name=Cc11_g12220;Ontology_term=CC_evidence_code:ISS,GO:0004645,GO:0005975,GO:0030170,CC_EC_number:2.4.1.1,PRODUCT:Alpha-1%2C4 glucan phosphorylase L-2 isozyme%2C chloroplastic/amyloplastic,CC_functional_completeness:complete,CC_gene:STP-1,CC_gene:PHO1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032345001~ Alpha-1%2C4 glucan phosphorylase L-2 isozyme%2C chloroplastic/amyloplastic~ STP-1~ complete;original_location=join(1983582..1983975%2C1984682..1984914%2C1985019..1985120%2C1985526..1985702%2C1985867..1986142%2C1986458..1986762%2C1987019..1987136%2C1987303..1987716%2C1987833..1987985%2C1988744..1988872%2C1989228..1989464%2C1989915..1989991%2C1990675..1990861%2C1991072..1991272%2C1991720..1991836);owner=coffea | |
| 68762 chr11 manual_curation exon 29358691 29359084 . - . Parent=GSCOCT00032345001 | |
| 68763 chr11 manual_curation exon 29357752 29357984 . - . Parent=GSCOCT00032345001 | |
| 68764 chr11 manual_curation exon 29357546 29357647 . - . Parent=GSCOCT00032345001 | |
| 68765 chr11 manual_curation exon 29356964 29357140 . - . Parent=GSCOCT00032345001 | |
| 68766 chr11 manual_curation exon 29356524 29356799 . - . Parent=GSCOCT00032345001 | |
| 68767 chr11 manual_curation exon 29355904 29356208 . - . Parent=GSCOCT00032345001 | |
| 68768 chr11 manual_curation exon 29355530 29355647 . - . Parent=GSCOCT00032345001 | |
| 68769 chr11 manual_curation exon 29354950 29355363 . - . Parent=GSCOCT00032345001 | |
| 68770 chr11 manual_curation exon 29354681 29354833 . - . Parent=GSCOCT00032345001 | |
| 68771 chr11 manual_curation exon 29353794 29353922 . - . Parent=GSCOCT00032345001 | |
| 68772 chr11 manual_curation exon 29353202 29353438 . - . Parent=GSCOCT00032345001 | |
| 68773 chr11 manual_curation exon 29352675 29352751 . - . Parent=GSCOCT00032345001 | |
| 68774 chr11 manual_curation exon 29351805 29351991 . - . Parent=GSCOCT00032345001 | |
| 68775 chr11 manual_curation exon 29351394 29351594 . - . Parent=GSCOCT00032345001 | |
| 68776 chr11 manual_curation exon 29350360 29350946 . - . Parent=GSCOCT00032345001 | |
| 68777 chr11 manual_curation CDS 29358691 29359084 . - 0 Parent=GSCOCT00032345001 | |
| 68778 chr11 manual_curation CDS 29357752 29357984 . - 1 Parent=GSCOCT00032345001 | |
| 68779 chr11 manual_curation CDS 29357546 29357647 . - 0 Parent=GSCOCT00032345001 | |
| 68780 chr11 manual_curation CDS 29356964 29357140 . - 0 Parent=GSCOCT00032345001 | |
| 68781 chr11 manual_curation CDS 29356524 29356799 . - 0 Parent=GSCOCT00032345001 | |
| 68782 chr11 manual_curation CDS 29355904 29356208 . - 0 Parent=GSCOCT00032345001 | |
| 68783 chr11 manual_curation CDS 29355530 29355647 . - 2 Parent=GSCOCT00032345001 | |
| 68784 chr11 manual_curation CDS 29354950 29355363 . - 0 Parent=GSCOCT00032345001 | |
| 68785 chr11 manual_curation CDS 29354681 29354833 . - 0 Parent=GSCOCT00032345001 | |
| 68786 chr11 manual_curation CDS 29353794 29353922 . - 0 Parent=GSCOCT00032345001 | |
| 68787 chr11 manual_curation CDS 29353202 29353438 . - 0 Parent=GSCOCT00032345001 | |
| 68788 chr11 manual_curation CDS 29352675 29352751 . - 0 Parent=GSCOCT00032345001 | |
| 68789 chr11 manual_curation CDS 29351805 29351991 . - 2 Parent=GSCOCT00032345001 | |
| 68790 chr11 manual_curation CDS 29351394 29351594 . - 0 Parent=GSCOCT00032345001 | |
| 68791 chr11 manual_curation CDS 29350830 29350946 . - 0 Parent=GSCOCT00032345001 | |
| 68792 chr11 manual_curation gene 29361322 29362890 . + . ID=GSCOCG00032344001;Name=Cc11_g12230 | |
| 68793 chr11 manual_curation mRNA 29361322 29362890 . + . ID=GSCOCT00032344001;Parent=GSCOCG00032344001;Name=Cc11_g12230 | |
| 68794 chr11 manual_curation polypeptide 29361322 29362890 . + . ID=GSCOCP00032344001;Dbxref=InterPro:IPR000727,PFAM:PF05739,PROFILE:PS50192,SMART:SM00397,SwissProt:Q9LMG8,SwissProt:Q9S7P9,SwissProt:Q9SD96,TAIR:AT1G13890.1,TAIR:AT5G07880.1,TAIR:AT5G61210.1,TrEMBL:G7JXY1,TrEMBL:I1J5Y3,TrEMBL:I1JEC7;Derives_from=GSCOCT00032344001;Name=Cc11_g12230;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative SNAP25 homologous protein SNAP30,CC_functional_completeness:complete,CC_gene:SNAP30,CC_gene:SNAP33,CC_gene:SNAP29;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032344001~ Putative SNAP25 homologous protein SNAP30~ SNAP30~ complete;original_location=complement(join(1980913..1981344%2C1980618..1980711%2C1980329..1980459%2C1980129..1980226%2C1979776..1979875));owner=coffea | |
| 68795 chr11 manual_curation exon 29362791 29362890 . + . Parent=GSCOCT00032344001 | |
| 68796 chr11 manual_curation exon 29362440 29362537 . + . Parent=GSCOCT00032344001 | |
| 68797 chr11 manual_curation exon 29362207 29362337 . + . Parent=GSCOCT00032344001 | |
| 68798 chr11 manual_curation exon 29361955 29362048 . + . Parent=GSCOCT00032344001 | |
| 68799 chr11 manual_curation exon 29361322 29361753 . + . Parent=GSCOCT00032344001 | |
| 68800 chr11 manual_curation CDS 29362791 29362890 . + 2 Parent=GSCOCT00032344001 | |
| 68801 chr11 manual_curation CDS 29362440 29362537 . + 0 Parent=GSCOCT00032344001 | |
| 68802 chr11 manual_curation CDS 29362207 29362337 . + 1 Parent=GSCOCT00032344001 | |
| 68803 chr11 manual_curation CDS 29361955 29362048 . + 0 Parent=GSCOCT00032344001 | |
| 68804 chr11 manual_curation CDS 29361322 29361753 . + 0 Parent=GSCOCT00032344001 | |
| 68805 chr11 manual_curation gene 29363218 29367316 . - . ID=GSCOCG00032343001;Name=Cc11_g12240 | |
| 68806 chr11 manual_curation mRNA 29363218 29367316 . - . ID=GSCOCT00032343001;Parent=GSCOCG00032343001;Name=Cc11_g12240 | |
| 68807 chr11 manual_curation polypeptide 29363693 29366574 . - . ID=GSCOCP00032343001;Dbxref=InterPro:IPR004843,InterPro:IPR008963,PFAM:PF00149,SUPERFAMILY:SSF49363,SwissProt:Q5MAU8,SwissProt:Q9LMG7,SwissProt:Q9ZQ81,TAIR:AT1G13900.1,TAIR:AT2G03450.1,TAIR:AT5G50400.1,TrEMBL:B9HXL1,TrEMBL:B9RCW2,TrEMBL:F6HF85;Derives_from=GSCOCT00032343001;Name=Cc11_g12240;Ontology_term=CC_evidence_code:ISS,GO:0003993,GO:0016787,GO:0046872,CC_EC_number:missing_EC_number,CC_EC_number:missing_EC_number,PRODUCT:Probable inactive purple acid phosphatase 2,CC_functional_completeness:fragment,CC_gene:PAP2,CC_gene:PAP9,CC_gene:PAP27;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032343001~ Probable inactive purple acid phosphatase 2~ PAP2~ fragment;original_location=join(1976092..1976313%2C1977711..1978973);owner=coffea | |
| 68808 chr11 manual_curation exon 29366353 29367316 . - . Parent=GSCOCT00032343001 | |
| 68809 chr11 manual_curation exon 29363218 29364955 . - . Parent=GSCOCT00032343001 | |
| 68810 chr11 manual_curation CDS 29366353 29366574 . - 0 Parent=GSCOCT00032343001 | |
| 68811 chr11 manual_curation CDS 29363693 29364955 . - 0 Parent=GSCOCT00032343001 | |
| 68812 chr11 manual_curation gene 29369191 29370043 . - . ID=GSCOCG00032342001;Name=Cc11_g12250 | |
| 68813 chr11 manual_curation mRNA 29369191 29370043 . - . ID=GSCOCT00032342001;Parent=GSCOCG00032342001;Name=Cc11_g12250 | |
| 68814 chr11 manual_curation polypeptide 29369432 29370043 . - . ID=GSCOCP00032342001;Dbxref=SwissProt:Q9LMG7,SwissProt:Q9ZQ81,TAIR:AT1G13900.1,TAIR:AT2G03450.1,TrEMBL:B9HXL1,TrEMBL:B9RCW2,TrEMBL:F6HF85;Derives_from=GSCOCT00032342001;Name=Cc11_g12250;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable inactive purple acid phosphatase 9,CC_functional_completeness:fragment,CC_gene:PAP9,CC_gene:PAP2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032342001~ Putative Probable inactive purple acid phosphatase 9~ PAP9~ fragment;original_location=1972623..1973234;owner=coffea | |
| 68815 chr11 manual_curation exon 29369191 29370043 . - . Parent=GSCOCT00032342001 | |
| 68816 chr11 manual_curation CDS 29369432 29370043 . - 0 Parent=GSCOCT00032342001 | |
| 68817 chr11 manual_curation gene 29370109 29371907 . - . ID=GSCOCG00032341001;Name=Cc11_g12260 | |
| 68818 chr11 manual_curation mRNA 29370109 29371907 . - . ID=GSCOCT00032341001;Parent=GSCOCG00032341001;Name=Cc11_g12260 | |
| 68819 chr11 manual_curation polypeptide 29370109 29371299 . - . ID=GSCOCP00032341001;Dbxref=GENE3D:G3DSA:2.60.40.380,InterPro:IPR008963,InterPro:IPR015914,SUPERFAMILY:SSF49363,SwissProt:Q9LMG7,SwissProt:Q9LMX4,SwissProt:Q9ZQ81,TAIR:AT1G13750.1,TAIR:AT1G13900.1,TAIR:AT2G03450.1,TrEMBL:A5BGC8,TrEMBL:B9HXL1,TrEMBL:F6HF85;Derives_from=GSCOCT00032341001;Name=Cc11_g12260;Ontology_term=CC_evidence_code:ISS,GO:0003993,GO:0046872,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:PAP2,CC_gene:PAP9,CC_gene:PAP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032341001~ Hypothetical protein~ PAP2~ missing_functional_completeness;original_location=join(1971367..1971588%2C1971981..1972262%2C1972366..1972557);owner=coffea | |
| 68820 chr11 manual_curation exon 29371078 29371907 . - . Parent=GSCOCT00032341001 | |
| 68821 chr11 manual_curation exon 29370404 29370685 . - . Parent=GSCOCT00032341001 | |
| 68822 chr11 manual_curation exon 29370109 29370300 . - . Parent=GSCOCT00032341001 | |
| 68823 chr11 manual_curation CDS 29371078 29371299 . - 0 Parent=GSCOCT00032341001 | |
| 68824 chr11 manual_curation CDS 29370404 29370685 . - 0 Parent=GSCOCT00032341001 | |
| 68825 chr11 manual_curation CDS 29370109 29370300 . - 0 Parent=GSCOCT00032341001 | |
| 68826 chr11 manual_curation gene 29381265 29386031 . + . ID=GSCOCG00032339001;Name=Cc11_g12270 | |
| 68827 chr11 manual_curation mRNA 29381265 29386031 . + . ID=GSCOCT00032339001;Parent=GSCOCG00032339001;Name=Cc11_g12270 | |
| 68828 chr11 manual_curation polypeptide 29381457 29385640 . + . ID=GSCOCP00032339001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,PFAM:PF00560,SMART:SM00369,SwissProt:Q8VZG8,SwissProt:Q9LP24,SwissProt:Q9SHI2,TAIR:AT1G13910.1,TAIR:AT1G35710.1,TAIR:AT5G61240.2,TrEMBL:C6ZS11,TrEMBL:I1JEC4;Derives_from=GSCOCT00032339001;Name=Cc11_g12270;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:3.1.3.16,PRODUCT:Putative Probable leucine-rich repeat receptor-like protein kinase At1g35710,CC_functional_completeness:complete,CC_gene:At1g35710,CC_gene:At1g17230,CC_gene:At4g08850;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032339001~ Putative Probable leucine-rich repeat receptor-like protein kinase At1g35710~ At1g35710~ complete;original_location=complement(join(1961116..1961209%2C1960154..1960307%2C1959907..1959978%2C1959434..1959505%2C1958988..1959059%2C1958750..1958893%2C1958559..1958639%2C1958400..1958471%2C1958215..1958286%2C1957198..1957269%2C1957026..1957116));owner=coffea | |
| 68829 chr11 manual_curation exon 29385550 29386031 . + . Parent=GSCOCT00032339001 | |
| 68830 chr11 manual_curation exon 29385397 29385468 . + . Parent=GSCOCT00032339001 | |
| 68831 chr11 manual_curation exon 29384380 29384451 . + . Parent=GSCOCT00032339001 | |
| 68832 chr11 manual_curation exon 29384195 29384266 . + . Parent=GSCOCT00032339001 | |
| 68833 chr11 manual_curation exon 29384027 29384107 . + . Parent=GSCOCT00032339001 | |
| 68834 chr11 manual_curation exon 29383773 29383916 . + . Parent=GSCOCT00032339001 | |
| 68835 chr11 manual_curation exon 29383607 29383678 . + . Parent=GSCOCT00032339001 | |
| 68836 chr11 manual_curation exon 29383161 29383232 . + . Parent=GSCOCT00032339001 | |
| 68837 chr11 manual_curation exon 29382688 29382759 . + . Parent=GSCOCT00032339001 | |
| 68838 chr11 manual_curation exon 29382359 29382512 . + . Parent=GSCOCT00032339001 | |
| 68839 chr11 manual_curation exon 29381265 29381550 . + . Parent=GSCOCT00032339001 | |
| 68840 chr11 manual_curation CDS 29385550 29385640 . + 2 Parent=GSCOCT00032339001 | |
| 68841 chr11 manual_curation CDS 29385397 29385468 . + 2 Parent=GSCOCT00032339001 | |
| 68842 chr11 manual_curation CDS 29384380 29384451 . + 2 Parent=GSCOCT00032339001 | |
| 68843 chr11 manual_curation CDS 29384195 29384266 . + 2 Parent=GSCOCT00032339001 | |
| 68844 chr11 manual_curation CDS 29384027 29384107 . + 2 Parent=GSCOCT00032339001 | |
| 68845 chr11 manual_curation CDS 29383773 29383916 . + 2 Parent=GSCOCT00032339001 | |
| 68846 chr11 manual_curation CDS 29383607 29383678 . + 2 Parent=GSCOCT00032339001 | |
| 68847 chr11 manual_curation CDS 29383161 29383232 . + 2 Parent=GSCOCT00032339001 | |
| 68848 chr11 manual_curation CDS 29382688 29382759 . + 2 Parent=GSCOCT00032339001 | |
| 68849 chr11 manual_curation CDS 29382359 29382512 . + 1 Parent=GSCOCT00032339001 | |
| 68850 chr11 manual_curation CDS 29381457 29381550 . + 0 Parent=GSCOCT00032339001 | |
| 68851 chr11 manual_curation gene 29386279 29387847 . - . ID=GSCOCG00032338001;Name=Cc11_g12280 | |
| 68852 chr11 manual_curation mRNA 29386279 29387847 . - . ID=GSCOCT00032338001;Parent=GSCOCG00032338001;Name=Cc11_g12280 | |
| 68853 chr11 manual_curation polypeptide 29386279 29387847 . - . ID=GSCOCP00032338001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:P0C8Q7,SwissProt:Q9FJY7,SwissProt:Q9SIL5,TAIR:AT2G20540.1,TAIR:AT5G08305.1,TAIR:AT5G66520.1,TIGRFAMs:TIGR00756,TrEMBL:F6HF86,TrEMBL:G7JXX4,TrEMBL:I1JEC3;Derives_from=GSCOCT00032338001;Name=Cc11_g12280;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Pentatricopeptide repeat-containing protein At5g66520,CC_functional_completeness:complete,CC_gene:PCMP-H61,CC_gene:PCMP-E78,CC_gene:PCMP-E105;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032338001~ Putative Pentatricopeptide repeat-containing protein At5g66520~ PCMP-H61~ complete;original_location=1954819..1956387;owner=coffea | |
| 68854 chr11 manual_curation exon 29386279 29387847 . - . Parent=GSCOCT00032338001 | |
| 68855 chr11 manual_curation CDS 29386279 29387847 . - 0 Parent=GSCOCT00032338001 | |
| 68856 chr11 manual_curation gene 29390799 29393932 . + . ID=GSCOCG00032337001;Name=Cc11_g12290 | |
| 68857 chr11 manual_curation mRNA 29390799 29393932 . + . ID=GSCOCT00032337001;Parent=GSCOCG00032337001;Name=Cc11_g12290 | |
| 68858 chr11 manual_curation polypeptide 29390995 29393797 . + . ID=GSCOCP00032337001;Dbxref=InterPro:IPR005199,InterPro:IPR017853,PANTHER:PTHR14363,PFAM:PF03662,SUPERFAMILY:SSF51445,SwissProt:Q8L608,SwissProt:Q9FF10,SwissProt:Q9FZP1,TAIR:AT5G07830.1,TAIR:AT5G34940.2,TAIR:AT5G61250.2,TrEMBL:B9HXL4,TrEMBL:B9RCW6,TrEMBL:I1JEC2;Derives_from=GSCOCT00032337001;Name=Cc11_g12290;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Heparanase-like protein 1,CC_functional_completeness:complete,CC_gene:At5g07830,CC_gene:At5g61250,CC_gene:At5g34940;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032337001~ Heparanase-like protein 1~ At5g07830~ complete;original_location=complement(join(1951438..1951671%2C1951302..1951338%2C1950621..1950801%2C1950360..1950514%2C1950021..1950254%2C1949739..1949928%2C1949506..1949631%2C1949322..1949421%2C1948869..1949180));owner=coffea | |
| 68859 chr11 manual_curation exon 29393486 29393932 . + . Parent=GSCOCT00032337001 | |
| 68860 chr11 manual_curation exon 29393245 29393344 . + . Parent=GSCOCT00032337001 | |
| 68861 chr11 manual_curation exon 29393035 29393160 . + . Parent=GSCOCT00032337001 | |
| 68862 chr11 manual_curation exon 29392738 29392927 . + . Parent=GSCOCT00032337001 | |
| 68863 chr11 manual_curation exon 29392412 29392645 . + . Parent=GSCOCT00032337001 | |
| 68864 chr11 manual_curation exon 29392152 29392306 . + . Parent=GSCOCT00032337001 | |
| 68865 chr11 manual_curation exon 29391865 29392045 . + . Parent=GSCOCT00032337001 | |
| 68866 chr11 manual_curation exon 29391328 29391364 . + . Parent=GSCOCT00032337001 | |
| 68867 chr11 manual_curation exon 29390799 29391228 . + . Parent=GSCOCT00032337001 | |
| 68868 chr11 manual_curation CDS 29393486 29393797 . + 0 Parent=GSCOCT00032337001 | |
| 68869 chr11 manual_curation CDS 29393245 29393344 . + 2 Parent=GSCOCT00032337001 | |
| 68870 chr11 manual_curation CDS 29393035 29393160 . + 2 Parent=GSCOCT00032337001 | |
| 68871 chr11 manual_curation CDS 29392738 29392927 . + 1 Parent=GSCOCT00032337001 | |
| 68872 chr11 manual_curation CDS 29392412 29392645 . + 1 Parent=GSCOCT00032337001 | |
| 68873 chr11 manual_curation CDS 29392152 29392306 . + 2 Parent=GSCOCT00032337001 | |
| 68874 chr11 manual_curation CDS 29391865 29392045 . + 1 Parent=GSCOCT00032337001 | |
| 68875 chr11 manual_curation CDS 29391328 29391364 . + 0 Parent=GSCOCT00032337001 | |
| 68876 chr11 manual_curation CDS 29390995 29391228 . + 0 Parent=GSCOCT00032337001 | |
| 68877 chr11 manual_curation gene 29396019 29396968 . + . ID=GSCOCG00032336001;Name=Cc11_g12300 | |
| 68878 chr11 manual_curation mRNA 29396019 29396968 . + . ID=GSCOCT00032336001;Parent=GSCOCG00032336001;Name=Cc11_g12300 | |
| 68879 chr11 manual_curation polypeptide 29396019 29396968 . + . ID=GSCOCP00032336001;Dbxref=InterPro:IPR001128,PANTHER:PTHR19383,PFAM:PF00067,TAIR:AT1G69500.1,TrEMBL:B2Z9X5,TrEMBL:B9HI89,TrEMBL:G7JKD7;Derives_from=GSCOCT00032336001;Name=Cc11_g12300;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,CC_EC_number:missing_EC_number,PRODUCT:Putative Cytochrome P450,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032336001~ Putative Cytochrome P450~ unknown_gene~ complete;original_location=complement(join(1946298..1946647%2C1946170..1946215%2C1946052..1946117%2C1945698..1945880));owner=coffea | |
| 68880 chr11 manual_curation exon 29396786 29396968 . + . Parent=GSCOCT00032336001 | |
| 68881 chr11 manual_curation exon 29396549 29396614 . + . Parent=GSCOCT00032336001 | |
| 68882 chr11 manual_curation exon 29396451 29396496 . + . Parent=GSCOCT00032336001 | |
| 68883 chr11 manual_curation exon 29396019 29396368 . + . Parent=GSCOCT00032336001 | |
| 68884 chr11 manual_curation CDS 29396786 29396968 . + 0 Parent=GSCOCT00032336001 | |
| 68885 chr11 manual_curation CDS 29396549 29396614 . + 0 Parent=GSCOCT00032336001 | |
| 68886 chr11 manual_curation CDS 29396451 29396496 . + 2 Parent=GSCOCT00032336001 | |
| 68887 chr11 manual_curation CDS 29396019 29396368 . + 0 Parent=GSCOCT00032336001 | |
| 68888 chr11 manual_curation gene 29403340 29405646 . + . ID=GSCOCG00032335001;Name=Cc11_g12310 | |
| 68889 chr11 manual_curation mRNA 29403340 29405646 . + . ID=GSCOCT00032335001;Parent=GSCOCG00032335001;Name=Cc11_g12310 | |
| 68890 chr11 manual_curation polypeptide 29403340 29405458 . + . ID=GSCOCP00032335001;Dbxref=InterPro:IPR005516,PFAM:PF03763,TAIR:AT1G13920.1,TAIR:AT1G69325.1,TAIR:AT5G61280.1,TrEMBL:B9RCW8,TrEMBL:D7T9T5,TrEMBL:G7JXW7;Derives_from=GSCOCT00032335001;Name=Cc11_g12310;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Remorin family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032335001~ Putative Remorin family protein~ unknown_gene~ complete;original_location=complement(join(1939079..1939326%2C1938762..1938850%2C1938239..1938496%2C1937722..1938067%2C1937486..1937567%2C1937208..1937399));owner=coffea | |
| 68891 chr11 manual_curation exon 29405267 29405646 . + . Parent=GSCOCT00032335001 | |
| 68892 chr11 manual_curation exon 29405099 29405180 . + . Parent=GSCOCT00032335001 | |
| 68893 chr11 manual_curation exon 29404599 29404944 . + . Parent=GSCOCT00032335001 | |
| 68894 chr11 manual_curation exon 29404170 29404427 . + . Parent=GSCOCT00032335001 | |
| 68895 chr11 manual_curation exon 29403816 29403904 . + . Parent=GSCOCT00032335001 | |
| 68896 chr11 manual_curation exon 29403340 29403587 . + . Parent=GSCOCT00032335001 | |
| 68897 chr11 manual_curation CDS 29405267 29405458 . + 0 Parent=GSCOCT00032335001 | |
| 68898 chr11 manual_curation CDS 29405099 29405180 . + 2 Parent=GSCOCT00032335001 | |
| 68899 chr11 manual_curation CDS 29404599 29404944 . + 1 Parent=GSCOCT00032335001 | |
| 68900 chr11 manual_curation CDS 29404170 29404427 . + 1 Parent=GSCOCT00032335001 | |
| 68901 chr11 manual_curation CDS 29403816 29403904 . + 2 Parent=GSCOCT00032335001 | |
| 68902 chr11 manual_curation CDS 29403340 29403587 . + 0 Parent=GSCOCT00032335001 | |
| 68903 chr11 manual_curation gene 29406355 29409489 . - . ID=GSCOCG00032334001;Name=Cc11_g12320 | |
| 68904 chr11 manual_curation mRNA 29406355 29409489 . - . ID=GSCOCT00032334001;Parent=GSCOCG00032334001;Name=Cc11_g12320 | |
| 68905 chr11 manual_curation polypeptide 29406744 29409489 . - . ID=GSCOCP00032334001;Dbxref=InterPro:IPR001841,InterPro:IPR017907,PROFILE:PS50089,PROSITE:PS00518,TAIR:AT1G69330.1,TAIR:AT1G74370.1,TAIR:AT3G29270.1,TrEMBL:F6GT36,TrEMBL:G7JXW5,TrEMBL:I1JEB9;Derives_from=GSCOCT00032334001;Name=Cc11_g12320;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:RING/U-box superfamily protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032334001~ RING/U-box superfamily protein~ unknown_gene~ modules;original_location=join(1933177..1933212%2C1933702..1933876%2C1935111..1935922);owner=coffea | |
| 68906 chr11 manual_curation exon 29409454 29409489 . - . Parent=GSCOCT00032334001 | |
| 68907 chr11 manual_curation exon 29408790 29408964 . - . Parent=GSCOCT00032334001 | |
| 68908 chr11 manual_curation exon 29406355 29407555 . - . Parent=GSCOCT00032334001 | |
| 68909 chr11 manual_curation CDS 29409454 29409489 . - 0 Parent=GSCOCT00032334001 | |
| 68910 chr11 manual_curation CDS 29408790 29408964 . - 0 Parent=GSCOCT00032334001 | |
| 68911 chr11 manual_curation CDS 29406744 29407555 . - 1 Parent=GSCOCT00032334001 | |
| 68912 chr11 manual_curation gene 29413653 29415171 . - . ID=GSCOCG00032332001;Name=Cc11_g12330 | |
| 68913 chr11 manual_curation mRNA 29413653 29415171 . - . ID=GSCOCT00032332001;Parent=GSCOCG00032332001;Name=Cc11_g12330 | |
| 68914 chr11 manual_curation polypeptide 29414152 29414862 . - . ID=GSCOCP00032332001;Dbxref=TAIR:AT2G03440.1,TrEMBL:A5BTC8,TrEMBL:A9P8J5,TrEMBL:F6HF70;Derives_from=GSCOCT00032332001;Name=Cc11_g12330;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032332001~ Putative uncharacterized protein~ unknown_gene~ modules;original_location=1927804..1928514;owner=coffea | |
| 68915 chr11 manual_curation exon 29413653 29415171 . - . Parent=GSCOCT00032332001 | |
| 68916 chr11 manual_curation CDS 29414152 29414862 . - 0 Parent=GSCOCT00032332001 | |
| 68917 chr11 manual_curation gene 29416721 29417447 . - . ID=GSCOCG00032331001;Name=Cc11_g12340 | |
| 68918 chr11 manual_curation mRNA 29416721 29417447 . - . ID=GSCOCT00032331001;Parent=GSCOCG00032331001;Name=Cc11_g12340 | |
| 68919 chr11 manual_curation polypeptide 29416721 29416951 . - . ID=GSCOCP00032331001;Derives_from=GSCOCT00032331001;Name=Cc11_g12340;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032331001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1925715..1925945;owner=coffea | |
| 68920 chr11 manual_curation exon 29416721 29417447 . - . Parent=GSCOCT00032331001 | |
| 68921 chr11 manual_curation CDS 29416721 29416951 . - 0 Parent=GSCOCT00032331001 | |
| 68922 chr11 manual_curation gene 29417506 29420197 . + . ID=GSCOCG00032330001;Name=Cc11_g12350 | |
| 68923 chr11 manual_curation mRNA 29417506 29420197 . + . ID=GSCOCT00032330001;Parent=GSCOCG00032330001;Name=Cc11_g12350 | |
| 68924 chr11 manual_curation polypeptide 29417677 29420060 . + . ID=GSCOCP00032330001;Dbxref=GENE3D:G3DSA:1.25.40.20,InterPro:IPR002110,InterPro:IPR020683,PFAM:PF00023,PROFILE:PS50088,PROFILE:PS50297,SMART:SM00248,SUPERFAMILY:SSF48403,SwissProt:O75832,SwissProt:Q9Z2X2,SwissProt:Q9Z2X3,TAIR:AT2G03430.1,TAIR:AT3G04710.1,TAIR:AT4G19150.1,TrEMBL:C6SYB0,TrEMBL:F6HF69,TrEMBL:I1J5X4;Derives_from=GSCOCT00032330001;Name=Cc11_g12350;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative 26S proteasome non-ATPase regulatory subunit 10,CC_functional_completeness:fragment,CC_gene:PSMD10,CC_gene:Psmd10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032330001~ Putative 26S proteasome non-ATPase regulatory subunit 10~ PSMD10~ fragment;original_location=complement(join(1924789..1924989%2C1924169..1924301%2C1923602..1923609%2C1923481..1923531%2C1923176..1923322%2C1922606..1922740));owner=coffea | |
| 68925 chr11 manual_curation exon 29419926 29420197 . + . Parent=GSCOCT00032330001 | |
| 68926 chr11 manual_curation exon 29419344 29419490 . + . Parent=GSCOCT00032330001 | |
| 68927 chr11 manual_curation exon 29419135 29419185 . + . Parent=GSCOCT00032330001 | |
| 68928 chr11 manual_curation exon 29419057 29419064 . + . Parent=GSCOCT00032330001 | |
| 68929 chr11 manual_curation exon 29418365 29418497 . + . Parent=GSCOCT00032330001 | |
| 68930 chr11 manual_curation exon 29417506 29417877 . + . Parent=GSCOCT00032330001 | |
| 68931 chr11 manual_curation CDS 29419926 29420060 . + 0 Parent=GSCOCT00032330001 | |
| 68932 chr11 manual_curation CDS 29419344 29419490 . + 0 Parent=GSCOCT00032330001 | |
| 68933 chr11 manual_curation CDS 29419135 29419185 . + 0 Parent=GSCOCT00032330001 | |
| 68934 chr11 manual_curation CDS 29419057 29419064 . + 1 Parent=GSCOCT00032330001 | |
| 68935 chr11 manual_curation CDS 29418365 29418497 . + 0 Parent=GSCOCT00032330001 | |
| 68936 chr11 manual_curation CDS 29417677 29417877 . + 0 Parent=GSCOCT00032330001 | |
| 68937 chr11 manual_curation gene 29421646 29423708 . + . ID=GSCOCG00032328001;Name=Cc11_g12360 | |
| 68938 chr11 manual_curation mRNA 29421646 29423708 . + . ID=GSCOCT00032328001;Parent=GSCOCG00032328001;Name=Cc11_g12360 | |
| 68939 chr11 manual_curation polypeptide 29421782 29423082 . + . ID=GSCOCP00032328001;Dbxref=TAIR:AT2G03420.1,TrEMBL:A5BTC6,TrEMBL:B9HXL9,TrEMBL:B9RCX1;Derives_from=GSCOCT00032328001;Name=Cc11_g12360;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Predicted protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032328001~ Predicted protein~ unknown_gene~ modules;original_location=complement(join(1920659..1920884%2C1920382..1920471%2C1920200..1920296%2C1919584..1919725));owner=coffea | |
| 68940 chr11 manual_curation exon 29422941 29423708 . + . Parent=GSCOCT00032328001 | |
| 68941 chr11 manual_curation exon 29422370 29422466 . + . Parent=GSCOCT00032328001 | |
| 68942 chr11 manual_curation exon 29422195 29422284 . + . Parent=GSCOCT00032328001 | |
| 68943 chr11 manual_curation exon 29421646 29422007 . + . Parent=GSCOCT00032328001 | |
| 68944 chr11 manual_curation CDS 29422941 29423082 . + 2 Parent=GSCOCT00032328001 | |
| 68945 chr11 manual_curation CDS 29422370 29422466 . + 1 Parent=GSCOCT00032328001 | |
| 68946 chr11 manual_curation CDS 29422195 29422284 . + 1 Parent=GSCOCT00032328001 | |
| 68947 chr11 manual_curation CDS 29421782 29422007 . + 0 Parent=GSCOCT00032328001 | |
| 68948 chr11 manual_curation gene 29424776 29431224 . + . ID=GSCOCG00032327001;Name=Cc11_g12370 | |
| 68949 chr11 manual_curation mRNA 29424776 29431224 . + . ID=GSCOCT00032327001;Parent=GSCOCG00032327001;Name=Cc11_g12370 | |
| 68950 chr11 manual_curation polypeptide 29425770 29431144 . + . ID=GSCOCP00032327001;Dbxref=GENE3D:G3DSA:3.40.525.10,InterPro:IPR001251,InterPro:IPR002589,PFAM:PF01661,PROFILE:PS50191,PROFILE:PS51154,SMART:SM00506,SMART:SM00516,SUPERFAMILY:SSF52087,SwissProt:A7T167,SwissProt:Q5CZL1,SwissProt:Q5XGM5,TAIR:AT1G69340.1,TAIR:AT2G40600.1,TrEMBL:B9HXM0,TrEMBL:B9SBR4,TrEMBL:F6HEZ4;Derives_from=GSCOCT00032327001;Name=Cc11_g12370;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein GDAP2 homolog,CC_functional_completeness:complete,CC_gene:gdap2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032327001~ Putative Protein GDAP2 homolog~ gdap2~ complete;original_location=complement(join(1916585..1916896%2C1915680..1915757%2C1915474..1915529%2C1915235..1915354%2C1915065..1915135%2C1914707..1914800%2C1914342..1914551%2C1913871..1914122%2C1913156..1913264%2C1912904..1912971%2C1912399..1912468%2C1912215..1912289%2C1911797..1911888%2C1911522..1911597));owner=coffea | |
| 68951 chr11 manual_curation exon 29425232 29425300 . + . Parent=GSCOCT00032327001 | |
| 68952 chr11 manual_curation exon 29424776 29425114 . + . Parent=GSCOCT00032327001 | |
| 68953 chr11 manual_curation exon 29431069 29431224 . + . Parent=GSCOCT00032327001 | |
| 68954 chr11 manual_curation exon 29430778 29430869 . + . Parent=GSCOCT00032327001 | |
| 68955 chr11 manual_curation exon 29430377 29430451 . + . Parent=GSCOCT00032327001 | |
| 68956 chr11 manual_curation exon 29430198 29430267 . + . Parent=GSCOCT00032327001 | |
| 68957 chr11 manual_curation exon 29429695 29429762 . + . Parent=GSCOCT00032327001 | |
| 68958 chr11 manual_curation exon 29429402 29429510 . + . Parent=GSCOCT00032327001 | |
| 68959 chr11 manual_curation exon 29428544 29428795 . + . Parent=GSCOCT00032327001 | |
| 68960 chr11 manual_curation exon 29428115 29428324 . + . Parent=GSCOCT00032327001 | |
| 68961 chr11 manual_curation exon 29427866 29427959 . + . Parent=GSCOCT00032327001 | |
| 68962 chr11 manual_curation exon 29427531 29427601 . + . Parent=GSCOCT00032327001 | |
| 68963 chr11 manual_curation exon 29427312 29427431 . + . Parent=GSCOCT00032327001 | |
| 68964 chr11 manual_curation exon 29427137 29427192 . + . Parent=GSCOCT00032327001 | |
| 68965 chr11 manual_curation exon 29426909 29426986 . + . Parent=GSCOCT00032327001 | |
| 68966 chr11 manual_curation exon 29425719 29426081 . + . Parent=GSCOCT00032327001 | |
| 68967 chr11 manual_curation CDS 29431069 29431144 . + 2 Parent=GSCOCT00032327001 | |
| 68968 chr11 manual_curation CDS 29430778 29430869 . + 0 Parent=GSCOCT00032327001 | |
| 68969 chr11 manual_curation CDS 29430377 29430451 . + 0 Parent=GSCOCT00032327001 | |
| 68970 chr11 manual_curation CDS 29430198 29430267 . + 2 Parent=GSCOCT00032327001 | |
| 68971 chr11 manual_curation CDS 29429695 29429762 . + 0 Parent=GSCOCT00032327001 | |
| 68972 chr11 manual_curation CDS 29429402 29429510 . + 2 Parent=GSCOCT00032327001 | |
| 68973 chr11 manual_curation CDS 29428544 29428795 . + 2 Parent=GSCOCT00032327001 | |
| 68974 chr11 manual_curation CDS 29428115 29428324 . + 2 Parent=GSCOCT00032327001 | |
| 68975 chr11 manual_curation CDS 29427866 29427959 . + 1 Parent=GSCOCT00032327001 | |
| 68976 chr11 manual_curation CDS 29427531 29427601 . + 2 Parent=GSCOCT00032327001 | |
| 68977 chr11 manual_curation CDS 29427312 29427431 . + 2 Parent=GSCOCT00032327001 | |
| 68978 chr11 manual_curation CDS 29427137 29427192 . + 0 Parent=GSCOCT00032327001 | |
| 68979 chr11 manual_curation CDS 29426909 29426986 . + 0 Parent=GSCOCT00032327001 | |
| 68980 chr11 manual_curation CDS 29425770 29426081 . + 0 Parent=GSCOCT00032327001 | |
| 68981 chr11 manual_curation gene 29432354 29436139 . + . ID=GSCOCG00032325001;Name=Cc11_g12380 | |
| 68982 chr11 manual_curation mRNA 29432354 29436139 . + . ID=GSCOCT00032325001;Parent=GSCOCG00032325001;Name=Cc11_g12380 | |
| 68983 chr11 manual_curation polypeptide 29432986 29435740 . + . ID=GSCOCP00032325001;Dbxref=InterPro:IPR001943,InterPro:IPR011722,PFAM:PF02151,PFAM:PF08755,TAIR:AT2G03390.1,TIGRFAMs:TIGR02097,TrEMBL:A5AY99,TrEMBL:B9RCX3,TrEMBL:D7T9T0;Derives_from=GSCOCT00032325001;Name=Cc11_g12380;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0004518,GO:0006289,CC_EC_number:missing_EC_number,PRODUCT:uvrB/uvrC motif-containing protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032325001~ uvrB/uvrC motif-containing protein~ unknown_gene~ modules;original_location=complement(join(1909348..1909680%2C1909181..1909240%2C1908825..1908919%2C1908499..1908671%2C1907779..1907891%2C1907351..1907396%2C1907168..1907208%2C1906926..1907081));owner=coffea | |
| 68984 chr11 manual_curation exon 29432354 29432637 . + . Parent=GSCOCT00032325001 | |
| 68985 chr11 manual_curation exon 29435585 29436139 . + . Parent=GSCOCT00032325001 | |
| 68986 chr11 manual_curation exon 29435458 29435498 . + . Parent=GSCOCT00032325001 | |
| 68987 chr11 manual_curation exon 29435270 29435315 . + . Parent=GSCOCT00032325001 | |
| 68988 chr11 manual_curation exon 29434775 29434887 . + . Parent=GSCOCT00032325001 | |
| 68989 chr11 manual_curation exon 29433995 29434167 . + . Parent=GSCOCT00032325001 | |
| 68990 chr11 manual_curation exon 29433747 29433841 . + . Parent=GSCOCT00032325001 | |
| 68991 chr11 manual_curation exon 29433426 29433485 . + . Parent=GSCOCT00032325001 | |
| 68992 chr11 manual_curation exon 29432960 29433318 . + . Parent=GSCOCT00032325001 | |
| 68993 chr11 manual_curation CDS 29435585 29435740 . + 0 Parent=GSCOCT00032325001 | |
| 68994 chr11 manual_curation CDS 29435458 29435498 . + 1 Parent=GSCOCT00032325001 | |
| 68995 chr11 manual_curation CDS 29435270 29435315 . + 0 Parent=GSCOCT00032325001 | |
| 68996 chr11 manual_curation CDS 29434775 29434887 . + 1 Parent=GSCOCT00032325001 | |
| 68997 chr11 manual_curation CDS 29433995 29434167 . + 2 Parent=GSCOCT00032325001 | |
| 68998 chr11 manual_curation CDS 29433747 29433841 . + 0 Parent=GSCOCT00032325001 | |
| 68999 chr11 manual_curation CDS 29433426 29433485 . + 0 Parent=GSCOCT00032325001 | |
| 69000 chr11 manual_curation CDS 29432986 29433318 . + 0 Parent=GSCOCT00032325001 | |
| 69001 chr11 manual_curation gene 29437563 29439800 . + . ID=GSCOCG00032323001;Name=Cc11_g12390 | |
| 69002 chr11 manual_curation mRNA 29437563 29439800 . + . ID=GSCOCT00032323001;Parent=GSCOCG00032323001;Name=Cc11_g12390 | |
| 69003 chr11 manual_curation polypeptide 29437563 29439800 . + . ID=GSCOCP00032323001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q7Y211,SwissProt:Q9C507,SwissProt:Q9STE1,TAIR:AT1G69350.1,TAIR:AT3G57430.1,TAIR:AT4G21300.1,TIGRFAMs:TIGR00756,TrEMBL:B9RCX4,TrEMBL:G7JXU6,TrEMBL:I1J5W7;Derives_from=GSCOCT00032323001;Name=Cc11_g12390;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative pentatricopeptide repeat-containing protein At1g69350%2C mitochondrial,CC_functional_completeness:complete,CC_gene:PCMP-E66,CC_gene:PCMP-H81,CC_gene:PCMP-E36;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032323001~ Putative pentatricopeptide repeat-containing protein At1g69350%2C mitochondrial~ PCMP-E66~ complete;original_location=complement(1902866..1905103);owner=coffea | |
| 69004 chr11 manual_curation exon 29437563 29439800 . + . Parent=GSCOCT00032323001 | |
| 69005 chr11 manual_curation CDS 29437563 29439800 . + 0 Parent=GSCOCT00032323001 | |
| 69006 chr11 manual_curation gene 29441137 29443263 . - . ID=GSCOCG00032321001;Name=Cc11_g12400 | |
| 69007 chr11 manual_curation mRNA 29441137 29443263 . - . ID=GSCOCT00032321001;Parent=GSCOCG00032321001;Name=Cc11_g12400 | |
| 69008 chr11 manual_curation polypeptide 29441137 29443263 . - . ID=GSCOCP00032321001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q3E6Q1,SwissProt:Q9FLZ9,SwissProt:Q9ZQ74,TAIR:AT1G11290.1,TAIR:AT2G03380.1,TAIR:AT5G39350.1,TIGRFAMs:TIGR00756,TrEMBL:A5AY98,TrEMBL:B9HXM3,TrEMBL:D7LQG9;Derives_from=GSCOCT00032321001;Name=Cc11_g12400;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At2g03380%2C mitochondrial,CC_functional_completeness:complete,CC_gene:PCMP-E47,CC_gene:PCMP-E16,CC_gene:PCMP-H40;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032321001~ Pentatricopeptide repeat-containing protein At2g03380%2C mitochondrial~ PCMP-E47~ complete;original_location=1899403..1901529;owner=coffea | |
| 69009 chr11 manual_curation exon 29441137 29443263 . - . Parent=GSCOCT00032321001 | |
| 69010 chr11 manual_curation CDS 29441137 29443263 . - 0 Parent=GSCOCT00032321001 | |
| 69011 chr11 manual_curation gene 29447265 29451318 . - . ID=GSCOCG00032320001;Name=Cc11_g12410 | |
| 69012 chr11 manual_curation mRNA 29447265 29451318 . - . ID=GSCOCT00032320001;Parent=GSCOCG00032320001;Name=Cc11_g12410 | |
| 69013 chr11 manual_curation polypeptide 29447265 29451318 . - . ID=GSCOCP00032320001;Dbxref=InterPro:IPR008581,PFAM:PF05904,TAIR:AT1G13940.1,TAIR:AT1G26620.1,TAIR:AT1G69360.1,TrEMBL:A5AY97,TrEMBL:B9HXM4,TrEMBL:F6HEZ1;Derives_from=GSCOCT00032320001;Name=Cc11_g12410;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Plant protein of unknown function (DUF863),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032320001~ Putative Plant protein of unknown function (DUF863)~ unknown_gene~ complete;original_location=join(1891348..1891581%2C1891978..1892788%2C1893210..1895180%2C1895232..1895401);owner=coffea | |
| 69014 chr11 manual_curation exon 29451085 29451318 . - . Parent=GSCOCT00032320001 | |
| 69015 chr11 manual_curation exon 29449878 29450688 . - . Parent=GSCOCT00032320001 | |
| 69016 chr11 manual_curation exon 29447486 29449456 . - . Parent=GSCOCT00032320001 | |
| 69017 chr11 manual_curation exon 29447265 29447434 . - . Parent=GSCOCT00032320001 | |
| 69018 chr11 manual_curation CDS 29451085 29451318 . - 0 Parent=GSCOCT00032320001 | |
| 69019 chr11 manual_curation CDS 29449878 29450688 . - 0 Parent=GSCOCT00032320001 | |
| 69020 chr11 manual_curation CDS 29447486 29449456 . - 1 Parent=GSCOCT00032320001 | |
| 69021 chr11 manual_curation CDS 29447265 29447434 . - 1 Parent=GSCOCT00032320001 | |
| 69022 chr11 manual_curation gene 29469228 29471941 . + . ID=GSCOCG00032318001;Name=Cc11_g12420 | |
| 69023 chr11 manual_curation mRNA 29469228 29471941 . + . ID=GSCOCT00032318001;Parent=GSCOCG00032318001;Name=Cc11_g12420 | |
| 69024 chr11 manual_curation polypeptide 29469443 29471696 . + . ID=GSCOCP00032318001;Dbxref=GENE3D:G3DSA:2.30.240.10,InterPro:IPR007493,PFAM:PF04398,SwissProt:Q9M015,TAIR:AT2G03350.1,TAIR:AT3G08890.1,TAIR:AT5G37070.1,TrEMBL:B9HIC0,TrEMBL:B9HXM8,TrEMBL:B9RCY1;Derives_from=GSCOCT00032318001;Name=Cc11_g12420;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized protein At5g01610,CC_functional_completeness:complete,CC_gene:At5g01610;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032318001~ Putative Uncharacterized protein At5g01610~ At5g01610~ complete;original_location=complement(join(1873122..1873223%2C1872248..1872302%2C1870970..1871349));owner=coffea | |
| 69025 chr11 manual_curation exon 29471317 29471941 . + . Parent=GSCOCT00032318001 | |
| 69026 chr11 manual_curation exon 29470364 29470418 . + . Parent=GSCOCT00032318001 | |
| 69027 chr11 manual_curation exon 29469228 29469544 . + . Parent=GSCOCT00032318001 | |
| 69028 chr11 manual_curation CDS 29471317 29471696 . + 1 Parent=GSCOCT00032318001 | |
| 69029 chr11 manual_curation CDS 29470364 29470418 . + 0 Parent=GSCOCT00032318001 | |
| 69030 chr11 manual_curation CDS 29469443 29469544 . + 0 Parent=GSCOCT00032318001 | |
| 69031 chr11 manual_curation gene 29472177 29477309 . - . ID=GSCOCG00032317001;Name=Cc11_g12430 | |
| 69032 chr11 manual_curation mRNA 29472177 29477309 . - . ID=GSCOCT00032317001;Parent=GSCOCG00032317001;Name=Cc11_g12430 | |
| 69033 chr11 manual_curation polypeptide 29472316 29477309 . - . ID=GSCOCP00032317001;Dbxref=InterPro:IPR003734,PANTHER:PTHR16255,PFAM:PF02582,SwissProt:Q03441,TAIR:AT1G69380.1,TAIR:AT5G13610.1,TrEMBL:B9HIB9,TrEMBL:B9HXM9,TrEMBL:D7TA73;Derives_from=GSCOCT00032317001;Name=Cc11_g12430;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF155),CC_functional_completeness:complete,CC_gene:RMD1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032317001~ Protein of unknown function (DUF155)~ RMD1~ complete;original_location=join(1865357..1865646%2C1866681..1866792%2C1867400..1867559%2C1869187..1869335%2C1869541..1869692%2C1869776..1869890%2C1870210..1870350);owner=coffea | |
| 69034 chr11 manual_curation exon 29477020 29477309 . - . Parent=GSCOCT00032317001 | |
| 69035 chr11 manual_curation exon 29475874 29475985 . - . Parent=GSCOCT00032317001 | |
| 69036 chr11 manual_curation exon 29475107 29475266 . - . Parent=GSCOCT00032317001 | |
| 69037 chr11 manual_curation exon 29473331 29473479 . - . Parent=GSCOCT00032317001 | |
| 69038 chr11 manual_curation exon 29472974 29473125 . - . Parent=GSCOCT00032317001 | |
| 69039 chr11 manual_curation exon 29472776 29472890 . - . Parent=GSCOCT00032317001 | |
| 69040 chr11 manual_curation exon 29472177 29472456 . - . Parent=GSCOCT00032317001 | |
| 69041 chr11 manual_curation CDS 29477020 29477309 . - 0 Parent=GSCOCT00032317001 | |
| 69042 chr11 manual_curation CDS 29475874 29475985 . - 2 Parent=GSCOCT00032317001 | |
| 69043 chr11 manual_curation CDS 29475107 29475266 . - 0 Parent=GSCOCT00032317001 | |
| 69044 chr11 manual_curation CDS 29473331 29473479 . - 1 Parent=GSCOCT00032317001 | |
| 69045 chr11 manual_curation CDS 29472974 29473125 . - 0 Parent=GSCOCT00032317001 | |
| 69046 chr11 manual_curation CDS 29472776 29472890 . - 2 Parent=GSCOCT00032317001 | |
| 69047 chr11 manual_curation CDS 29472316 29472456 . - 0 Parent=GSCOCT00032317001 | |
| 69048 chr11 manual_curation gene 29487237 29491920 . + . ID=GSCOCG00032316001;Name=Cc11_g12440 | |
| 69049 chr11 manual_curation mRNA 29487237 29491920 . + . ID=GSCOCT00032316001;Parent=GSCOCG00032316001;Name=Cc11_g12440 | |
| 69050 chr11 manual_curation polypeptide 29487344 29491574 . + . ID=GSCOCP00032316001;Dbxref=InterPro:IPR001048,PFAM:PF00696,SUPERFAMILY:SSF53633,SwissProt:Q60352,TAIR:AT1G26640.1,TrEMBL:A9PFR5,TrEMBL:B9RCY5,TrEMBL:D7U194;Derives_from=GSCOCT00032316001;Name=Cc11_g12440;Ontology_term=CC_evidence_code:ISS,GO:0008652,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized protein MJ0044,CC_functional_completeness:modules,CC_gene:MJ0044;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032316001~ Putative Uncharacterized protein MJ0044~ MJ0044~ modules;original_location=complement(join(1855238..1855322%2C1854335..1854565%2C1854047..1854144%2C1853651..1853693%2C1853118..1853179%2C1852937..1852993%2C1852077..1852112%2C1851927..1852004%2C1851683..1851749%2C1851535..1851597%2C1851272..1851375%2C1851092..1851196));owner=coffea | |
| 69051 chr11 manual_curation exon 29491470 29491920 . + . Parent=GSCOCT00032316001 | |
| 69052 chr11 manual_curation exon 29491291 29491394 . + . Parent=GSCOCT00032316001 | |
| 69053 chr11 manual_curation exon 29491069 29491131 . + . Parent=GSCOCT00032316001 | |
| 69054 chr11 manual_curation exon 29490917 29490983 . + . Parent=GSCOCT00032316001 | |
| 69055 chr11 manual_curation exon 29490662 29490739 . + . Parent=GSCOCT00032316001 | |
| 69056 chr11 manual_curation exon 29490554 29490589 . + . Parent=GSCOCT00032316001 | |
| 69057 chr11 manual_curation exon 29489673 29489729 . + . Parent=GSCOCT00032316001 | |
| 69058 chr11 manual_curation exon 29489487 29489548 . + . Parent=GSCOCT00032316001 | |
| 69059 chr11 manual_curation exon 29488973 29489015 . + . Parent=GSCOCT00032316001 | |
| 69060 chr11 manual_curation exon 29488522 29488619 . + . Parent=GSCOCT00032316001 | |
| 69061 chr11 manual_curation exon 29488101 29488331 . + . Parent=GSCOCT00032316001 | |
| 69062 chr11 manual_curation exon 29487237 29487428 . + . Parent=GSCOCT00032316001 | |
| 69063 chr11 manual_curation CDS 29491470 29491574 . + 0 Parent=GSCOCT00032316001 | |
| 69064 chr11 manual_curation CDS 29491291 29491394 . + 1 Parent=GSCOCT00032316001 | |
| 69065 chr11 manual_curation CDS 29491069 29491131 . + 1 Parent=GSCOCT00032316001 | |
| 69066 chr11 manual_curation CDS 29490917 29490983 . + 0 Parent=GSCOCT00032316001 | |
| 69067 chr11 manual_curation CDS 29490662 29490739 . + 0 Parent=GSCOCT00032316001 | |
| 69068 chr11 manual_curation CDS 29490554 29490589 . + 0 Parent=GSCOCT00032316001 | |
| 69069 chr11 manual_curation CDS 29489673 29489729 . + 0 Parent=GSCOCT00032316001 | |
| 69070 chr11 manual_curation CDS 29489487 29489548 . + 1 Parent=GSCOCT00032316001 | |
| 69071 chr11 manual_curation CDS 29488973 29489015 . + 0 Parent=GSCOCT00032316001 | |
| 69072 chr11 manual_curation CDS 29488522 29488619 . + 1 Parent=GSCOCT00032316001 | |
| 69073 chr11 manual_curation CDS 29488101 29488331 . + 1 Parent=GSCOCT00032316001 | |
| 69074 chr11 manual_curation CDS 29487344 29487428 . + 0 Parent=GSCOCT00032316001 | |
| 69075 chr11 manual_curation gene 29491997 29495032 . - . ID=GSCOCG00032315001;Name=Cc11_g12450 | |
| 69076 chr11 manual_curation mRNA 29491997 29495032 . - . ID=GSCOCT00032315001;Parent=GSCOCG00032315001;Name=Cc11_g12450 | |
| 69077 chr11 manual_curation polypeptide 29492828 29494801 . - . ID=GSCOCP00032315001;Dbxref=GENE3D:G3DSA:2.30.30.30,GENE3D:G3DSA:2.40.50.140,InterPro:IPR001884,InterPro:IPR005824,InterPro:IPR008991,InterPro:IPR012340,InterPro:IPR014722,InterPro:IPR016027,InterPro:IPR019769,InterPro:IPR020189,PANTHER:PTHR11673,PFAM:PF00467,PFAM:PF01287,PIR:PIRSF003025,PROSITE:PS00302,SUPERFAMILY:SSF50104,SUPERFAMILY:SSF50249,SwissProt:P24922,SwissProt:P69040,SwissProt:Q9AXJ4,TAIR:AT1G13950.1,TAIR:AT1G26630.1,TAIR:AT1G69410.1,TIGRFAMs:TIGR00037,TrEMBL:A5B605,TrEMBL:Q71F50;Derives_from=GSCOCT00032315001;Name=Cc11_g12450;Ontology_term=CC_evidence_code:ISS,GO:0003723,GO:0003746,GO:0006452,GO:0008612,GO:0043022,GO:0045901,GO:0045905,CC_EC_number:missing_EC_number,PRODUCT:Eukaryotic translation initiation factor 5A,CC_functional_completeness:complete,CC_gene:EIF-5A2,CC_gene:EIF-5A1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032315001~ Eukaryotic translation initiation factor 5A~ EIF-5A2~ complete;original_location=join(1847865..1847987%2C1848776..1848898%2C1849012..1849068%2C1849159..1849233%2C1849737..1849838);owner=coffea | |
| 69078 chr11 manual_curation exon 29494679 29495032 . - . Parent=GSCOCT00032315001 | |
| 69079 chr11 manual_curation exon 29493768 29493890 . - . Parent=GSCOCT00032315001 | |
| 69080 chr11 manual_curation exon 29493598 29493654 . - . Parent=GSCOCT00032315001 | |
| 69081 chr11 manual_curation exon 29493433 29493507 . - . Parent=GSCOCT00032315001 | |
| 69082 chr11 manual_curation exon 29491997 29492929 . - . Parent=GSCOCT00032315001 | |
| 69083 chr11 manual_curation CDS 29494679 29494801 . - 0 Parent=GSCOCT00032315001 | |
| 69084 chr11 manual_curation CDS 29493768 29493890 . - 0 Parent=GSCOCT00032315001 | |
| 69085 chr11 manual_curation CDS 29493598 29493654 . - 0 Parent=GSCOCT00032315001 | |
| 69086 chr11 manual_curation CDS 29493433 29493507 . - 0 Parent=GSCOCT00032315001 | |
| 69087 chr11 manual_curation CDS 29492828 29492929 . - 0 Parent=GSCOCT00032315001 | |
| 69088 chr11 manual_curation gene 29497160 29501955 . - . ID=GSCOCG00032314001;Name=Cc11_g12460 | |
| 69089 chr11 manual_curation mRNA 29497160 29501955 . - . ID=GSCOCT00032314001;Parent=GSCOCG00032314001;Name=Cc11_g12460 | |
| 69090 chr11 manual_curation polypeptide 29497728 29501883 . - . ID=GSCOCP00032314001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019775,InterPro:IPR019781,InterPro:IPR019782,PFAM:PF00400,PROFILE:PS50082,PROFILE:PS50294,PROSITE:PS00678,SMART:SM00320,SUPERFAMILY:SSF50978,SwissProt:O43684,SwissProt:Q1JQB2,SwissProt:Q9WVA3,TAIR:AT1G49910.1,TAIR:AT1G69400.1,TAIR:AT3G19590.1,TrEMBL:B9HXN1,TrEMBL:D7SXK7,TrEMBL:I1J5W0;Derives_from=GSCOCT00032314001;Name=Cc11_g12460;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Mitotic checkpoint protein BUB3,CC_functional_completeness:complete,CC_gene:Bub3,CC_gene:BUB3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032314001~ Putative Mitotic checkpoint protein BUB3~ Bub3~ complete;original_location=join(1840783..1840890%2C1840993..1841123%2C1841341..1841420%2C1841873..1842118%2C1842424..1842496%2C1843303..1843383%2C1843481..1843562%2C1844085..1844185%2C1844860..1844938);owner=coffea | |
| 69091 chr11 manual_curation exon 29501776 29501955 . - . Parent=GSCOCT00032314001 | |
| 69092 chr11 manual_curation exon 29501543 29501673 . - . Parent=GSCOCT00032314001 | |
| 69093 chr11 manual_curation exon 29501246 29501325 . - . Parent=GSCOCT00032314001 | |
| 69094 chr11 manual_curation exon 29500548 29500793 . - . Parent=GSCOCT00032314001 | |
| 69095 chr11 manual_curation exon 29500170 29500242 . - . Parent=GSCOCT00032314001 | |
| 69096 chr11 manual_curation exon 29499283 29499363 . - . Parent=GSCOCT00032314001 | |
| 69097 chr11 manual_curation exon 29499104 29499185 . - . Parent=GSCOCT00032314001 | |
| 69098 chr11 manual_curation exon 29498481 29498581 . - . Parent=GSCOCT00032314001 | |
| 69099 chr11 manual_curation exon 29497160 29497806 . - . Parent=GSCOCT00032314001 | |
| 69100 chr11 manual_curation CDS 29501776 29501883 . - 0 Parent=GSCOCT00032314001 | |
| 69101 chr11 manual_curation CDS 29501543 29501673 . - 0 Parent=GSCOCT00032314001 | |
| 69102 chr11 manual_curation CDS 29501246 29501325 . - 2 Parent=GSCOCT00032314001 | |
| 69103 chr11 manual_curation CDS 29500548 29500793 . - 1 Parent=GSCOCT00032314001 | |
| 69104 chr11 manual_curation CDS 29500170 29500242 . - 1 Parent=GSCOCT00032314001 | |
| 69105 chr11 manual_curation CDS 29499283 29499363 . - 2 Parent=GSCOCT00032314001 | |
| 69106 chr11 manual_curation CDS 29499104 29499185 . - 2 Parent=GSCOCT00032314001 | |
| 69107 chr11 manual_curation CDS 29498481 29498581 . - 0 Parent=GSCOCT00032314001 | |
| 69108 chr11 manual_curation CDS 29497728 29497806 . - 2 Parent=GSCOCT00032314001 | |
| 69109 chr11 manual_curation gene 29502995 29505574 . - . ID=GSCOCG00032313001;Name=Cc11_g12470 | |
| 69110 chr11 manual_curation mRNA 29502995 29505574 . - . ID=GSCOCT00032313001;Parent=GSCOCG00032313001;Name=Cc11_g12470 | |
| 69111 chr11 manual_curation polypeptide 29503331 29505348 . - . ID=GSCOCP00032313001;Dbxref=InterPro:IPR005527,PFAM:PF03776,SwissProt:Q9C4Z7,TAIR:AT1G69390.1,TrEMBL:A9PD90,TrEMBL:B9HXN0,TrEMBL:D7U192;Derives_from=GSCOCT00032313001;Name=Cc11_g12470;Ontology_term=CC_evidence_code:ISS,GO:0032955,GO:0051301,CC_EC_number:missing_EC_number,PRODUCT:Cell division topological specificity factor homolog%2C chloroplastic,CC_functional_completeness:complete,CC_gene:MINE1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032313001~ Cell division topological specificity factor homolog%2C chloroplastic~ MINE1~ complete;original_location=join(1837318..1837407%2C1838718..1839335);owner=coffea | |
| 69112 chr11 manual_curation exon 29505259 29505574 . - . Parent=GSCOCT00032313001 | |
| 69113 chr11 manual_curation exon 29502995 29503948 . - . Parent=GSCOCT00032313001 | |
| 69114 chr11 manual_curation CDS 29505259 29505348 . - 0 Parent=GSCOCT00032313001 | |
| 69115 chr11 manual_curation CDS 29503331 29503948 . - 0 Parent=GSCOCT00032313001 | |
| 69116 chr11 manual_curation gene 29510949 29515747 . + . ID=GSCOCG00032312001;Name=Cc11_g12480 | |
| 69117 chr11 manual_curation mRNA 29510949 29515747 . + . ID=GSCOCT00032312001;Parent=GSCOCG00032312001;Name=Cc11_g12480 | |
| 69118 chr11 manual_curation polypeptide 29511243 29515287 . + . ID=GSCOCP00032312001;Dbxref=InterPro:IPR003657,PFAM:PF03106,PROFILE:PS50811,SMART:SM00774,SwissProt:Q93WV0,SwissProt:Q9XI90,SwissProt:Q9ZQ70,TAIR:AT1G13960.1,TAIR:AT2G03340.1,TAIR:AT4G26640.2,TrEMBL:Q0H793,TrEMBL:Q5IY47,TrEMBL:Q9ZPL6;Derives_from=GSCOCT00032312001;Name=Cc11_g12480;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0043565,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Probable WRKY transcription factor 4,CC_functional_completeness:complete,CC_gene:WRKY4,CC_gene:WRKY3,CC_gene:WRKY20;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032312001~ Probable WRKY transcription factor 4~ WRKY4~ complete;original_location=complement(join(1830998..1831423%2C1828420..1829135%2C1828155..1828313%2C1827379..1827658));owner=coffea | |
| 69119 chr11 manual_curation exon 29515008 29515747 . + . Parent=GSCOCT00032312001 | |
| 69120 chr11 manual_curation exon 29514353 29514511 . + . Parent=GSCOCT00032312001 | |
| 69121 chr11 manual_curation exon 29513531 29514246 . + . Parent=GSCOCT00032312001 | |
| 69122 chr11 manual_curation exon 29510949 29511668 . + . Parent=GSCOCT00032312001 | |
| 69123 chr11 manual_curation CDS 29515008 29515287 . + 2 Parent=GSCOCT00032312001 | |
| 69124 chr11 manual_curation CDS 29514353 29514511 . + 2 Parent=GSCOCT00032312001 | |
| 69125 chr11 manual_curation CDS 29513531 29514246 . + 0 Parent=GSCOCT00032312001 | |
| 69126 chr11 manual_curation CDS 29511243 29511668 . + 0 Parent=GSCOCT00032312001 | |
| 69127 chr11 manual_curation gene 29516042 29519143 . - . ID=GSCOCG00032311001;Name=Cc11_g12490 | |
| 69128 chr11 manual_curation mRNA 29516042 29519143 . - . ID=GSCOCT00032311001;Parent=GSCOCG00032311001;Name=Cc11_g12490 | |
| 69129 chr11 manual_curation polypeptide 29516206 29519143 . - . ID=GSCOCP00032311001;Dbxref=InterPro:IPR009769,PFAM:PF07059,TAIR:AT1G13970.1,TAIR:AT3G29180.1,TAIR:AT5G39430.1,TrEMBL:B9RCY7,TrEMBL:B9SVK3,TrEMBL:F6H5W1;Derives_from=GSCOCT00032311001;Name=Cc11_g12490;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF1336),CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032311001~ Protein of unknown function (DUF1336)~ unknown_gene~ fragment;original_location=join(1823523..1823702%2C1824014..1824142%2C1825514..1825708%2C1826149..1826271%2C1826347..1826460);owner=coffea | |
| 69130 chr11 manual_curation exon 29518964 29519143 . - . Parent=GSCOCT00032311001 | |
| 69131 chr11 manual_curation exon 29518524 29518652 . - . Parent=GSCOCT00032311001 | |
| 69132 chr11 manual_curation exon 29516958 29517152 . - . Parent=GSCOCT00032311001 | |
| 69133 chr11 manual_curation exon 29516395 29516517 . - . Parent=GSCOCT00032311001 | |
| 69134 chr11 manual_curation exon 29516042 29516319 . - . Parent=GSCOCT00032311001 | |
| 69135 chr11 manual_curation CDS 29518964 29519143 . - 0 Parent=GSCOCT00032311001 | |
| 69136 chr11 manual_curation CDS 29518524 29518652 . - 0 Parent=GSCOCT00032311001 | |
| 69137 chr11 manual_curation CDS 29516958 29517152 . - 0 Parent=GSCOCT00032311001 | |
| 69138 chr11 manual_curation CDS 29516395 29516517 . - 0 Parent=GSCOCT00032311001 | |
| 69139 chr11 manual_curation CDS 29516206 29516319 . - 0 Parent=GSCOCT00032311001 | |
| 69140 chr11 manual_curation gene 29519213 29523265 . - . ID=GSCOCG00032310001;Name=Cc11_g12500 | |
| 69141 chr11 manual_curation mRNA 29519213 29523265 . - . ID=GSCOCT00032310001;Parent=GSCOCG00032310001;Name=Cc11_g12500 | |
| 69142 chr11 manual_curation polypeptide 29519213 29521306 . - . ID=GSCOCP00032310001;Dbxref=TAIR:AT3G29180.1,TAIR:AT5G39430.1,TrEMBL:B9SVK3,TrEMBL:F6H5W1,TrEMBL:G7L343;Derives_from=GSCOCT00032310001;Name=Cc11_g12500;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032310001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=join(1821360..1821639%2C1822159..1822242%2C1822326..1822793%2C1823305..1823453);owner=coffea | |
| 69143 chr11 manual_curation exon 29523105 29523265 . - . Parent=GSCOCT00032310001 | |
| 69144 chr11 manual_curation exon 29521995 29522137 . - . Parent=GSCOCT00032310001 | |
| 69145 chr11 manual_curation exon 29521027 29521436 . - . Parent=GSCOCT00032310001 | |
| 69146 chr11 manual_curation exon 29520424 29520507 . - . Parent=GSCOCT00032310001 | |
| 69147 chr11 manual_curation exon 29519873 29520340 . - . Parent=GSCOCT00032310001 | |
| 69148 chr11 manual_curation exon 29519213 29519361 . - . Parent=GSCOCT00032310001 | |
| 69149 chr11 manual_curation CDS 29521027 29521306 . - 0 Parent=GSCOCT00032310001 | |
| 69150 chr11 manual_curation CDS 29520424 29520507 . - 1 Parent=GSCOCT00032310001 | |
| 69151 chr11 manual_curation CDS 29519873 29520340 . - 1 Parent=GSCOCT00032310001 | |
| 69152 chr11 manual_curation CDS 29519213 29519361 . - 1 Parent=GSCOCT00032310001 | |
| 69153 chr11 manual_curation gene 29536844 29543457 . + . ID=GSCOCG00032309001;Name=Cc11_g12510 | |
| 69154 chr11 manual_curation mRNA 29536844 29543457 . + . ID=GSCOCT00032309001;Parent=GSCOCG00032309001;Name=Cc11_g12510 | |
| 69155 chr11 manual_curation polypeptide 29537705 29542979 . + . ID=GSCOCP00032309001;Dbxref=InterPro:IPR001594,PFAM:PF01529,PROFILE:PS50216,SwissProt:Q8L5Y5,SwissProt:Q9C533,SwissProt:Q9LIE4,TAIR:AT1G69420.2,TAIR:AT3G22180.1,TAIR:AT4G15080.1,TrEMBL:B9HIB3,TrEMBL:B9S925,TrEMBL:F6H5W9;Derives_from=GSCOCT00032309001;Name=Cc11_g12510;Ontology_term=CC_evidence_code:ISS,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Probable S-acyltransferase At1g69420,CC_functional_completeness:complete,CC_gene:At1g69420,CC_gene:At4g15080,CC_gene:At3g22180;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032309001~ Probable S-acyltransferase At1g69420~ At1g69420~ complete;original_location=complement(join(1804920..1804961%2C1804669..1804782%2C1802808..1803206%2C1802469..1802537%2C1802311..1802382%2C1801712..1801840%2C1801489..1801575%2C1801105..1801287%2C1799687..1800472));owner=coffea | |
| 69156 chr11 manual_curation exon 29542194 29543457 . + . Parent=GSCOCT00032309001 | |
| 69157 chr11 manual_curation exon 29541379 29541561 . + . Parent=GSCOCT00032309001 | |
| 69158 chr11 manual_curation exon 29541091 29541177 . + . Parent=GSCOCT00032309001 | |
| 69159 chr11 manual_curation exon 29540826 29540954 . + . Parent=GSCOCT00032309001 | |
| 69160 chr11 manual_curation exon 29540284 29540355 . + . Parent=GSCOCT00032309001 | |
| 69161 chr11 manual_curation exon 29540129 29540197 . + . Parent=GSCOCT00032309001 | |
| 69162 chr11 manual_curation exon 29539460 29539858 . + . Parent=GSCOCT00032309001 | |
| 69163 chr11 manual_curation exon 29537884 29537997 . + . Parent=GSCOCT00032309001 | |
| 69164 chr11 manual_curation exon 29536844 29537746 . + . Parent=GSCOCT00032309001 | |
| 69165 chr11 manual_curation CDS 29542194 29542979 . + 0 Parent=GSCOCT00032309001 | |
| 69166 chr11 manual_curation CDS 29541379 29541561 . + 0 Parent=GSCOCT00032309001 | |
| 69167 chr11 manual_curation CDS 29541091 29541177 . + 0 Parent=GSCOCT00032309001 | |
| 69168 chr11 manual_curation CDS 29540826 29540954 . + 0 Parent=GSCOCT00032309001 | |
| 69169 chr11 manual_curation CDS 29540284 29540355 . + 0 Parent=GSCOCT00032309001 | |
| 69170 chr11 manual_curation CDS 29540129 29540197 . + 0 Parent=GSCOCT00032309001 | |
| 69171 chr11 manual_curation CDS 29539460 29539858 . + 0 Parent=GSCOCT00032309001 | |
| 69172 chr11 manual_curation CDS 29537884 29537997 . + 0 Parent=GSCOCT00032309001 | |
| 69173 chr11 manual_curation CDS 29537705 29537746 . + 0 Parent=GSCOCT00032309001 | |
| 69174 chr11 manual_curation gene 29543999 29545458 . - . ID=GSCOCG00032308001;Name=Cc11_g12520 | |
| 69175 chr11 manual_curation mRNA 29543999 29545458 . - . ID=GSCOCT00032308001;Parent=GSCOCG00032308001;Name=Cc11_g12520 | |
| 69176 chr11 manual_curation polypeptide 29544330 29545328 . - . ID=GSCOCP00032308001;Dbxref=TAIR:AT2G03330.1,TAIR:AT3G11810.1,TAIR:AT5G44860.1,TrEMBL:B9HIB2,TrEMBL:D7LQG5,TrEMBL:Q9SF17;Derives_from=GSCOCT00032308001;Name=Cc11_g12520;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032308001~ Putative unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G03330.1)%3B Has 141 Blast hits to 141 proteins in 21 species: Archae - 0%3B Bacteria - 9%3B Metazoa - 0%3B Fungi - 0%3B Plants - 131%3B Viruses - 0%3B Other Eukaryotes - 1 (source: NCBI BLink).~ unknown_gene~ complete;original_location=1797338..1798336;owner=coffea | |
| 69177 chr11 manual_curation exon 29543999 29545458 . - . Parent=GSCOCT00032308001 | |
| 69178 chr11 manual_curation CDS 29544330 29545328 . - 0 Parent=GSCOCT00032308001 | |
| 69179 chr11 manual_curation gene 29546941 29548026 . + . ID=GSCOCG00032307001;Name=Cc11_g12530 | |
| 69180 chr11 manual_curation mRNA 29546941 29548026 . + . ID=GSCOCT00032307001;Parent=GSCOCG00032307001;Name=Cc11_g12530 | |
| 69181 chr11 manual_curation polypeptide 29546941 29548026 . + . ID=GSCOCP00032307001;Dbxref=TAIR:AT1G26650.1,TAIR:AT1G69430.1,TAIR:AT4G19950.1,TrEMBL:B9S923,TrEMBL:I1NDM0,TrEMBL:I1NDM1;Derives_from=GSCOCT00032307001;Name=Cc11_g12530;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032307001~ unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G69430.1)%3B Has 205 Blast hits to 204 proteins in 17 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 205%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(1794640..1795725);owner=coffea | |
| 69182 chr11 manual_curation exon 29546941 29548026 . + . Parent=GSCOCT00032307001 | |
| 69183 chr11 manual_curation CDS 29546941 29548026 . + 0 Parent=GSCOCT00032307001 | |
| 69184 chr11 manual_curation gene 29552989 29555854 . + . ID=GSCOCG00032304001;Name=Cc11_g12540 | |
| 69185 chr11 manual_curation mRNA 29552989 29555854 . + . ID=GSCOCT00032304001;Parent=GSCOCG00032304001;Name=Cc11_g12540 | |
| 69186 chr11 manual_curation polypeptide 29553716 29555583 . + . ID=GSCOCP00032304001;Dbxref=InterPro:IPR004127,InterPro:IPR009053,PFAM:PF02996,SUPERFAMILY:SSF46579,SwissProt:A7T0W1,SwissProt:Q54ND3,SwissProt:Q9WTZ0,TAIR:AT1G26660.2,TrEMBL:B9S922,TrEMBL:C6SY11,TrEMBL:I1JE88;Derives_from=GSCOCT00032304001;Name=Cc11_g12540;Ontology_term=CC_evidence_code:ISS,GO:0006457,GO:0016272,GO:0051082,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein UXT homolog,CC_functional_completeness:complete,CC_gene:DDB_G0285389,CC_gene:v1g140887,CC_gene:Uxt;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032304001~ Putative Protein UXT homolog~ DDB_G0285389~ complete;original_location=complement(join(1788853..1788950%2C1788364..1788393%2C1788131..1788232%2C1787795..1787902%2C1787441..1787495%2C1787083..1787130));owner=coffea | |
| 69187 chr11 manual_curation exon 29555536 29555854 . + . Parent=GSCOCT00032304001 | |
| 69188 chr11 manual_curation exon 29555171 29555225 . + . Parent=GSCOCT00032304001 | |
| 69189 chr11 manual_curation exon 29554764 29554871 . + . Parent=GSCOCT00032304001 | |
| 69190 chr11 manual_curation exon 29554434 29554535 . + . Parent=GSCOCT00032304001 | |
| 69191 chr11 manual_curation exon 29554273 29554302 . + . Parent=GSCOCT00032304001 | |
| 69192 chr11 manual_curation exon 29552989 29553813 . + . Parent=GSCOCT00032304001 | |
| 69193 chr11 manual_curation CDS 29555536 29555583 . + 0 Parent=GSCOCT00032304001 | |
| 69194 chr11 manual_curation CDS 29555171 29555225 . + 2 Parent=GSCOCT00032304001 | |
| 69195 chr11 manual_curation CDS 29554764 29554871 . + 2 Parent=GSCOCT00032304001 | |
| 69196 chr11 manual_curation CDS 29554434 29554535 . + 2 Parent=GSCOCT00032304001 | |
| 69197 chr11 manual_curation CDS 29554273 29554302 . + 2 Parent=GSCOCT00032304001 | |
| 69198 chr11 manual_curation CDS 29553716 29553813 . + 0 Parent=GSCOCT00032304001 | |
| 69199 chr11 manual_curation gene 29557153 29564104 . + . ID=GSCOCG00032302001;Name=Cc11_g12550 | |
| 69200 chr11 manual_curation mRNA 29557153 29564104 . + . ID=GSCOCT00032302001;Parent=GSCOCG00032302001;Name=Cc11_g12550 | |
| 69201 chr11 manual_curation polypeptide 29557449 29563667 . + . ID=GSCOCP00032302001;Dbxref=InterPro:IPR019024,PFAM:PF09468,SwissProt:Q28GD9,SwissProt:Q5HZP1,SwissProt:Q5XI96,TAIR:AT4G20325.1,TrEMBL:A5BJS1,TrEMBL:B9RVN4,TrEMBL:D7SU83;Derives_from=GSCOCT00032302001;Name=Cc11_g12550;Ontology_term=CC_evidence_code:ISS,GO:0005634,CC_EC_number:missing_EC_number,PRODUCT:Putative Ribonuclease H2 subunit B,CC_functional_completeness:complete,CC_gene:rnaseh2b,CC_gene:Rnaseh2b;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032302001~ Putative Ribonuclease H2 subunit B~ rnaseh2b~ complete;original_location=complement(join(1785169..1785217%2C1784288..1784347%2C1783794..1783895%2C1783109..1783185%2C1782654..1782777%2C1782314..1782378%2C1781177..1781246%2C1780785..1780860%2C1779578..1779674%2C1778999..1779121));owner=coffea | |
| 69202 chr11 manual_curation exon 29557153 29557194 . + . Parent=GSCOCT00032302001 | |
| 69203 chr11 manual_curation exon 29563545 29564104 . + . Parent=GSCOCT00032302001 | |
| 69204 chr11 manual_curation exon 29562992 29563088 . + . Parent=GSCOCT00032302001 | |
| 69205 chr11 manual_curation exon 29561806 29561881 . + . Parent=GSCOCT00032302001 | |
| 69206 chr11 manual_curation exon 29561420 29561489 . + . Parent=GSCOCT00032302001 | |
| 69207 chr11 manual_curation exon 29560288 29560352 . + . Parent=GSCOCT00032302001 | |
| 69208 chr11 manual_curation exon 29559889 29560012 . + . Parent=GSCOCT00032302001 | |
| 69209 chr11 manual_curation exon 29559481 29559557 . + . Parent=GSCOCT00032302001 | |
| 69210 chr11 manual_curation exon 29558771 29558872 . + . Parent=GSCOCT00032302001 | |
| 69211 chr11 manual_curation exon 29558319 29558378 . + . Parent=GSCOCT00032302001 | |
| 69212 chr11 manual_curation exon 29557440 29557497 . + . Parent=GSCOCT00032302001 | |
| 69213 chr11 manual_curation CDS 29563545 29563667 . + 0 Parent=GSCOCT00032302001 | |
| 69214 chr11 manual_curation CDS 29562992 29563088 . + 2 Parent=GSCOCT00032302001 | |
| 69215 chr11 manual_curation CDS 29561806 29561881 . + 1 Parent=GSCOCT00032302001 | |
| 69216 chr11 manual_curation CDS 29561420 29561489 . + 0 Parent=GSCOCT00032302001 | |
| 69217 chr11 manual_curation CDS 29560288 29560352 . + 1 Parent=GSCOCT00032302001 | |
| 69218 chr11 manual_curation CDS 29559889 29560012 . + 0 Parent=GSCOCT00032302001 | |
| 69219 chr11 manual_curation CDS 29559481 29559557 . + 1 Parent=GSCOCT00032302001 | |
| 69220 chr11 manual_curation CDS 29558771 29558872 . + 1 Parent=GSCOCT00032302001 | |
| 69221 chr11 manual_curation CDS 29558319 29558378 . + 1 Parent=GSCOCT00032302001 | |
| 69222 chr11 manual_curation CDS 29557449 29557497 . + 0 Parent=GSCOCT00032302001 | |
| 69223 chr11 manual_curation gene 29569881 29574000 . - . ID=GSCOCG00032301001;Name=Cc11_g12560 | |
| 69224 chr11 manual_curation mRNA 29569881 29574000 . - . ID=GSCOCT00032301001;Parent=GSCOCG00032301001;Name=Cc11_g12560 | |
| 69225 chr11 manual_curation polypeptide 29570089 29573706 . - . ID=GSCOCP00032301001;Dbxref=InterPro:IPR003100,InterPro:IPR003165,InterPro:IPR012337,InterPro:IPR014811,PFAM:PF02170,PFAM:PF02171,PFAM:PF08699,PROFILE:PS50821,PROFILE:PS50822,SUPERFAMILY:SSF53098,SwissProt:Q75HC2,SwissProt:Q7XSA2,SwissProt:Q9C793,TAIR:AT1G48410.2,TAIR:AT1G69440.1,TAIR:AT5G43810.1,TrEMBL:B9S921,TrEMBL:F6H5X3,TrEMBL:F6I1U1;Derives_from=GSCOCT00032301001;Name=Cc11_g12560;Ontology_term=CC_evidence_code:ISS,GO:0003676,CC_EC_number:missing_EC_number,PRODUCT:Protein argonaute 7,CC_functional_completeness:complete,CC_gene:AGO7,CC_gene:AGO1B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032301001~ Protein argonaute 7~ AGO7~ complete;original_location=join(1768960..1769314%2C1769803..1771033%2C1771122..1772577);owner=coffea | |
| 69226 chr11 manual_curation exon 29573352 29574000 . - . Parent=GSCOCT00032301001 | |
| 69227 chr11 manual_curation exon 29571633 29572863 . - . Parent=GSCOCT00032301001 | |
| 69228 chr11 manual_curation exon 29569881 29571544 . - . Parent=GSCOCT00032301001 | |
| 69229 chr11 manual_curation CDS 29573352 29573706 . - 0 Parent=GSCOCT00032301001 | |
| 69230 chr11 manual_curation CDS 29571633 29572863 . - 1 Parent=GSCOCT00032301001 | |
| 69231 chr11 manual_curation CDS 29570089 29571544 . - 2 Parent=GSCOCT00032301001 | |
| 69232 chr11 manual_curation gene 29577769 29585078 . - . ID=GSCOCG00032299001;Name=Cc11_g12570 | |
| 69233 chr11 manual_curation mRNA 29577769 29585078 . - . ID=GSCOCT00032299001;Parent=GSCOCG00032299001;Name=Cc11_g12570 | |
| 69234 chr11 manual_curation polypeptide 29578352 29584348 . - . ID=GSCOCP00032299001;Dbxref=InterPro:IPR003864,PFAM:PF02714,SwissProt:Q06538,SwissProt:Q09766,SwissProt:Q09809,TAIR:AT1G10090.1,TAIR:AT1G69450.1,TAIR:AT3G01100.1,TrEMBL:B9HXP2,TrEMBL:B9S919,TrEMBL:F6I1U2;Derives_from=GSCOCT00032299001;Name=Cc11_g12570;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Early-responsive to dehydration stress protein (ERD4),CC_functional_completeness:complete,CC_gene:SPAC2G11.09,CC_gene:SPAC24H6.13,CC_gene:YLR241W;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032299001~ Early-responsive to dehydration stress protein (ERD4)~ SPAC2G11.09~ complete;original_location=join(1758318..1758598%2C1758808..1758963%2C1759064..1759127%2C1759481..1759690%2C1760267..1760458%2C1760927..1761225%2C1762173..1762449%2C1763263..1763538%2C1763674..1763907%2C1764159..1764314);owner=coffea | |
| 69235 chr11 manual_curation exon 29584889 29585078 . - . Parent=GSCOCT00032299001 | |
| 69236 chr11 manual_curation exon 29584068 29584408 . - . Parent=GSCOCT00032299001 | |
| 69237 chr11 manual_curation exon 29583703 29583858 . - . Parent=GSCOCT00032299001 | |
| 69238 chr11 manual_curation exon 29583539 29583602 . - . Parent=GSCOCT00032299001 | |
| 69239 chr11 manual_curation exon 29582976 29583185 . - . Parent=GSCOCT00032299001 | |
| 69240 chr11 manual_curation exon 29582208 29582399 . - . Parent=GSCOCT00032299001 | |
| 69241 chr11 manual_curation exon 29581441 29581739 . - . Parent=GSCOCT00032299001 | |
| 69242 chr11 manual_curation exon 29580217 29580493 . - . Parent=GSCOCT00032299001 | |
| 69243 chr11 manual_curation exon 29579128 29579403 . - . Parent=GSCOCT00032299001 | |
| 69244 chr11 manual_curation exon 29578759 29578992 . - . Parent=GSCOCT00032299001 | |
| 69245 chr11 manual_curation exon 29577769 29578507 . - . Parent=GSCOCT00032299001 | |
| 69246 chr11 manual_curation CDS 29584068 29584348 . - 0 Parent=GSCOCT00032299001 | |
| 69247 chr11 manual_curation CDS 29583703 29583858 . - 2 Parent=GSCOCT00032299001 | |
| 69248 chr11 manual_curation CDS 29583539 29583602 . - 2 Parent=GSCOCT00032299001 | |
| 69249 chr11 manual_curation CDS 29582976 29583185 . - 0 Parent=GSCOCT00032299001 | |
| 69250 chr11 manual_curation CDS 29582208 29582399 . - 0 Parent=GSCOCT00032299001 | |
| 69251 chr11 manual_curation CDS 29581441 29581739 . - 0 Parent=GSCOCT00032299001 | |
| 69252 chr11 manual_curation CDS 29580217 29580493 . - 2 Parent=GSCOCT00032299001 | |
| 69253 chr11 manual_curation CDS 29579128 29579403 . - 0 Parent=GSCOCT00032299001 | |
| 69254 chr11 manual_curation CDS 29578759 29578992 . - 0 Parent=GSCOCT00032299001 | |
| 69255 chr11 manual_curation CDS 29578352 29578507 . - 0 Parent=GSCOCT00032299001 | |
| 69256 chr11 manual_curation gene 29586811 29588472 . + . ID=GSCOCG00032297001;Name=Cc11_g12580 | |
| 69257 chr11 manual_curation mRNA 29586811 29588472 . + . ID=GSCOCT00032297001;Parent=GSCOCG00032297001;Name=Cc11_g12580 | |
| 69258 chr11 manual_curation polypeptide 29587039 29588003 . + . ID=GSCOCP00032297001;Dbxref=TrEMBL:B9S918;Derives_from=GSCOCT00032297001;Name=Cc11_g12580;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032297001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1755526..1755627%2C1755058..1755435%2C1754663..1754749));owner=coffea | |
| 69259 chr11 manual_curation exon 29587917 29588472 . + . Parent=GSCOCT00032297001 | |
| 69260 chr11 manual_curation exon 29587231 29587608 . + . Parent=GSCOCT00032297001 | |
| 69261 chr11 manual_curation exon 29586811 29587140 . + . Parent=GSCOCT00032297001 | |
| 69262 chr11 manual_curation CDS 29587917 29588003 . + 0 Parent=GSCOCT00032297001 | |
| 69263 chr11 manual_curation CDS 29587231 29587608 . + 0 Parent=GSCOCT00032297001 | |
| 69264 chr11 manual_curation CDS 29587039 29587140 . + 0 Parent=GSCOCT00032297001 | |
| 69265 chr11 manual_curation gene 29589769 29593714 . + . ID=GSCOCG00032296001;Name=Cc11_g12590 | |
| 69266 chr11 manual_curation mRNA 29589769 29593714 . + . ID=GSCOCT00032296001;Parent=GSCOCG00032296001;Name=Cc11_g12590 | |
| 69267 chr11 manual_curation polypeptide 29591936 29593207 . + . ID=GSCOCP00032296001;Dbxref=GENE3D:G3DSA:1.10.10.10,InterPro:IPR000717,InterPro:IPR011991,InterPro:IPR013143,PFAM:PF01399,SMART:SM00088,SMART:SM00753,SwissProt:O00231,SwissProt:Q2KI42,SwissProt:Q8BG32,TAIR:AT1G29150.1,TAIR:AT2G26990.1,TrEMBL:A5BPX8,TrEMBL:B9HXP3,TrEMBL:B9I7R0;Derives_from=GSCOCT00032296001;Name=Cc11_g12590;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:26S proteasome non-ATPase regulatory subunit 11,CC_functional_completeness:complete,CC_gene:Psmd11,CC_gene:PSMD11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032296001~ 26S proteasome non-ATPase regulatory subunit 11~ Psmd11~ complete;original_location=complement(1749459..1750730);owner=coffea | |
| 69268 chr11 manual_curation exon 29589769 29589903 . + . Parent=GSCOCT00032296001 | |
| 69269 chr11 manual_curation exon 29591911 29593714 . + . Parent=GSCOCT00032296001 | |
| 69270 chr11 manual_curation CDS 29591936 29593207 . + 0 Parent=GSCOCT00032296001 | |
| 69271 chr11 manual_curation gene 29601983 29605154 . + . ID=GSCOCG00032294001;Name=Cc11_g12600 | |
| 69272 chr11 manual_curation mRNA 29601983 29605154 . + . ID=GSCOCT00032294001;Parent=GSCOCG00032294001;Name=Cc11_g12600 | |
| 69273 chr11 manual_curation polypeptide 29602985 29605154 . + . ID=GSCOCP00032294001;Dbxref=SwissProt:Q42510,SwissProt:Q92538,SwissProt:Q9R1D7,TAIR:AT1G13980.1,TAIR:AT5G19610.1,TAIR:AT5G39500.1,TrEMBL:A5BJQ1,TrEMBL:B9S916,TrEMBL:F6HT63;Derives_from=GSCOCT00032294001;Name=Cc11_g12600;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pattern formation protein EMB30,CC_functional_completeness:fragment,CC_gene:EMB30,CC_gene:GBF1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032294001~ Pattern formation protein EMB30~ EMB30~ fragment;original_location=complement(join(1738947..1739681%2C1737693..1738008%2C1737512..1737591));owner=coffea | |
| 69274 chr11 manual_curation exon 29601983 29602066 . + . Parent=GSCOCT00032294001 | |
| 69275 chr11 manual_curation exon 29605075 29605154 . + . Parent=GSCOCT00032294001 | |
| 69276 chr11 manual_curation exon 29604658 29604973 . + . Parent=GSCOCT00032294001 | |
| 69277 chr11 manual_curation exon 29602893 29603719 . + . Parent=GSCOCT00032294001 | |
| 69278 chr11 manual_curation CDS 29605075 29605154 . + 1 Parent=GSCOCT00032294001 | |
| 69279 chr11 manual_curation CDS 29604658 29604973 . + 0 Parent=GSCOCT00032294001 | |
| 69280 chr11 manual_curation CDS 29602985 29603719 . + 0 Parent=GSCOCT00032294001 | |
| 69281 chr11 manual_curation gene 29605249 29608839 . + . ID=GSCOCG00032293001;Name=Cc11_g12610 | |
| 69282 chr11 manual_curation mRNA 29605249 29608839 . + . ID=GSCOCT00032293001;Parent=GSCOCG00032293001;Name=Cc11_g12610 | |
| 69283 chr11 manual_curation polypeptide 29605249 29608269 . + . ID=GSCOCP00032293001;Dbxref=InterPro:IPR000904,PFAM:PF01369,PROFILE:PS50190,SMART:SM00222,SUPERFAMILY:SSF48425,SwissProt:Q42510,SwissProt:Q92538,SwissProt:Q9R1D7,TAIR:AT1G13980.1,TAIR:AT5G19610.1,TAIR:AT5G39500.1,TrEMBL:F6HT63,TrEMBL:I1MZA3;Derives_from=GSCOCT00032293001;Name=Cc11_g12610;Ontology_term=CC_evidence_code:ISS,GO:0005086,GO:0005622,GO:0032012,CC_EC_number:missing_EC_number,PRODUCT:Pattern formation protein EMB30,CC_functional_completeness:fragment,CC_gene:EMB30,CC_gene:GBF1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032293001~ Pattern formation protein EMB30~ EMB30~ fragment;original_location=complement(1734397..1737417);owner=coffea | |
| 69284 chr11 manual_curation exon 29605249 29608839 . + . Parent=GSCOCT00032293001 | |
| 69285 chr11 manual_curation CDS 29605249 29608269 . + 0 Parent=GSCOCT00032293001 | |
| 69286 chr11 manual_curation gene 29610463 29612991 . + . ID=GSCOCG00032292001;Name=Cc11_g12620 | |
| 69287 chr11 manual_curation mRNA 29610463 29612991 . + . ID=GSCOCT00032292001;Parent=GSCOCG00032292001;Name=Cc11_g12620 | |
| 69288 chr11 manual_curation polypeptide 29610835 29612762 . + . ID=GSCOCP00032292001;Dbxref=InterPro:IPR007705,PFAM:PF05008,SwissProt:Q9LVP9,SwissProt:Q9SEL5,SwissProt:Q9SEL6,TAIR:AT1G26670.1,TAIR:AT3G29100.1,TAIR:AT5G39510.1,TrEMBL:C6SZA7,TrEMBL:F6GT59,TrEMBL:I1J5U5;Derives_from=GSCOCT00032292001;Name=Cc11_g12620;Ontology_term=CC_evidence_code:ISS,GO:0006886,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Vesicle transport v-SNARE 12,CC_functional_completeness:complete,CC_gene:VTI12,CC_gene:VTI13,CC_gene:VTI11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032292001~ Vesicle transport v-SNARE 12~ VTI12~ complete;original_location=complement(join(1731738..1731831%2C1731309..1731367%2C1731041..1731229%2C1730219..1730404%2C1729904..1730056));owner=coffea | |
| 69289 chr11 manual_curation exon 29610463 29610566 . + . Parent=GSCOCT00032292001 | |
| 69290 chr11 manual_curation exon 29612610 29612991 . + . Parent=GSCOCT00032292001 | |
| 69291 chr11 manual_curation exon 29612262 29612447 . + . Parent=GSCOCT00032292001 | |
| 69292 chr11 manual_curation exon 29611437 29611625 . + . Parent=GSCOCT00032292001 | |
| 69293 chr11 manual_curation exon 29611299 29611357 . + . Parent=GSCOCT00032292001 | |
| 69294 chr11 manual_curation exon 29610777 29610928 . + . Parent=GSCOCT00032292001 | |
| 69295 chr11 manual_curation CDS 29612610 29612762 . + 0 Parent=GSCOCT00032292001 | |
| 69296 chr11 manual_curation CDS 29612262 29612447 . + 0 Parent=GSCOCT00032292001 | |
| 69297 chr11 manual_curation CDS 29611437 29611625 . + 0 Parent=GSCOCT00032292001 | |
| 69298 chr11 manual_curation CDS 29611299 29611357 . + 1 Parent=GSCOCT00032292001 | |
| 69299 chr11 manual_curation CDS 29610835 29610928 . + 0 Parent=GSCOCT00032292001 | |
| 69300 chr11 manual_curation gene 29613355 29616382 . + . ID=GSCOCG00032291001;Name=Cc11_g12630 | |
| 69301 chr11 manual_curation mRNA 29613355 29616382 . + . ID=GSCOCT00032291001;Parent=GSCOCG00032291001;Name=Cc11_g12630 | |
| 69302 chr11 manual_curation polypeptide 29613664 29616032 . + . ID=GSCOCP00032291001;Dbxref=InterPro:IPR021503,PFAM:PF11360,TAIR:AT1G13990.3,TrEMBL:B9S914,TrEMBL:D7SXL8,TrEMBL:G7JWJ7;Derives_from=GSCOCT00032291001;Name=Cc11_g12630;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032291001~ Putative unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3110 (InterPro:IPR021503)%3B Has 4 Blast hits to 4 proteins in 1 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 4%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(1728615..1729002%2C1727540..1727639%2C1727340..1727463%2C1726841..1726936%2C1726634..1726768));owner=coffea | |
| 69303 chr11 manual_curation exon 29615898 29616382 . + . Parent=GSCOCT00032291001 | |
| 69304 chr11 manual_curation exon 29615730 29615825 . + . Parent=GSCOCT00032291001 | |
| 69305 chr11 manual_curation exon 29615203 29615326 . + . Parent=GSCOCT00032291001 | |
| 69306 chr11 manual_curation exon 29615027 29615126 . + . Parent=GSCOCT00032291001 | |
| 69307 chr11 manual_curation exon 29613355 29614051 . + . Parent=GSCOCT00032291001 | |
| 69308 chr11 manual_curation CDS 29615898 29616032 . + 0 Parent=GSCOCT00032291001 | |
| 69309 chr11 manual_curation CDS 29615730 29615825 . + 0 Parent=GSCOCT00032291001 | |
| 69310 chr11 manual_curation CDS 29615203 29615326 . + 2 Parent=GSCOCT00032291001 | |
| 69311 chr11 manual_curation CDS 29615027 29615126 . + 1 Parent=GSCOCT00032291001 | |
| 69312 chr11 manual_curation CDS 29613664 29614051 . + 0 Parent=GSCOCT00032291001 | |
| 69313 chr11 manual_curation gene 29618498 29624906 . + . ID=GSCOCG00032290001;Name=Cc11_g12640 | |
| 69314 chr11 manual_curation mRNA 29618498 29624906 . + . ID=GSCOCT00032290001;Parent=GSCOCG00032290001;Name=Cc11_g12640 | |
| 69315 chr11 manual_curation polypeptide 29618632 29624464 . + . ID=GSCOCP00032290001;Dbxref=GENE3D:G3DSA:1.25.40.20,InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002110,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR016253,InterPro:IPR017441,InterPro:IPR020635,InterPro:IPR020683,PFAM:PF00023,PFAM:PF07714,PIR:PIRSF000654,PRINTS:PR00109,PROFILE:PS50011,PROFILE:PS50088,PROFILE:PS50297,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SMART:SM00248,SUPERFAMILY:SSF48403,SUPERFAMILY:SSF56112,SwissProt:P18160,SwissProt:Q54R58,SwissProt:Q54TM7,TAIR:AT1G14000.1,TAIR:AT3G58760.1,TAIR:AT4G18950.1,TrEMBL:B9HIA6,TrEMBL:B9S913,TrEMBL:D7TX21;Derives_from=GSCOCT00032290001;Name=Cc11_g12640;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,GO:0009966,CC_EC_number:2.7.10.2,PRODUCT:VH1-interacting kinase,CC_functional_completeness:complete,CC_gene:splA,CC_gene:drkD,CC_gene:DDB_G0283397;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032290001~ VH1-interacting kinase~ splA~ complete;original_location=complement(join(1723714..1724034%2C1722708..1722782%2C1721661..1721777%2C1720857..1720951%2C1720015..1720135%2C1719853..1719932%2C1719128..1719187%2C1718845..1718966%2C1718678..1718763%2C1718471..1718586%2C1718202..1718328));owner=coffea | |
| 69316 chr11 manual_curation exon 29624338 29624906 . + . Parent=GSCOCT00032290001 | |
| 69317 chr11 manual_curation exon 29624080 29624195 . + . Parent=GSCOCT00032290001 | |
| 69318 chr11 manual_curation exon 29623903 29623988 . + . Parent=GSCOCT00032290001 | |
| 69319 chr11 manual_curation exon 29623700 29623821 . + . Parent=GSCOCT00032290001 | |
| 69320 chr11 manual_curation exon 29623479 29623538 . + . Parent=GSCOCT00032290001 | |
| 69321 chr11 manual_curation exon 29622734 29622813 . + . Parent=GSCOCT00032290001 | |
| 69322 chr11 manual_curation exon 29622531 29622651 . + . Parent=GSCOCT00032290001 | |
| 69323 chr11 manual_curation exon 29621715 29621809 . + . Parent=GSCOCT00032290001 | |
| 69324 chr11 manual_curation exon 29620889 29621005 . + . Parent=GSCOCT00032290001 | |
| 69325 chr11 manual_curation exon 29619884 29619958 . + . Parent=GSCOCT00032290001 | |
| 69326 chr11 manual_curation exon 29618498 29618952 . + . Parent=GSCOCT00032290001 | |
| 69327 chr11 manual_curation CDS 29624338 29624464 . + 2 Parent=GSCOCT00032290001 | |
| 69328 chr11 manual_curation CDS 29624080 29624195 . + 0 Parent=GSCOCT00032290001 | |
| 69329 chr11 manual_curation CDS 29623903 29623988 . + 1 Parent=GSCOCT00032290001 | |
| 69330 chr11 manual_curation CDS 29623700 29623821 . + 2 Parent=GSCOCT00032290001 | |
| 69331 chr11 manual_curation CDS 29623479 29623538 . + 2 Parent=GSCOCT00032290001 | |
| 69332 chr11 manual_curation CDS 29622734 29622813 . + 0 Parent=GSCOCT00032290001 | |
| 69333 chr11 manual_curation CDS 29622531 29622651 . + 2 Parent=GSCOCT00032290001 | |
| 69334 chr11 manual_curation CDS 29621715 29621809 . + 0 Parent=GSCOCT00032290001 | |
| 69335 chr11 manual_curation CDS 29620889 29621005 . + 0 Parent=GSCOCT00032290001 | |
| 69336 chr11 manual_curation CDS 29619884 29619958 . + 0 Parent=GSCOCT00032290001 | |
| 69337 chr11 manual_curation CDS 29618632 29618952 . + 0 Parent=GSCOCT00032290001 | |
| 69338 chr11 manual_curation gene 29625008 29628364 . - . ID=GSCOCG00032289001;Name=Cc11_g12650 | |
| 69339 chr11 manual_curation mRNA 29625008 29628364 . - . ID=GSCOCT00032289001;Parent=GSCOCG00032289001;Name=Cc11_g12650 | |
| 69340 chr11 manual_curation polypeptide 29625170 29627947 . - . ID=GSCOCP00032289001;Dbxref=InterPro:IPR000348,InterPro:IPR009038,PFAM:PF01105,PROFILE:PS50866,SwissProt:O35587,SwissProt:P49755,SwissProt:Q28735,TAIR:AT1G14010.1,TAIR:AT1G26690.1,TAIR:AT1G69460.1,TrEMBL:B9S912,TrEMBL:C6TH02,TrEMBL:I1KMF6;Derives_from=GSCOCT00032289001;Name=Cc11_g12650;Ontology_term=CC_evidence_code:ISS,GO:0006810,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Putative Transmembrane protein Tmp21,CC_functional_completeness:fragment,CC_gene:TMED10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032289001~ Putative Transmembrane protein Tmp21~ TMED10~ fragment;original_location=join(1714719..1714796%2C1715213..1715422%2C1717152..1717228%2C1717352..1717496);owner=coffea | |
| 69341 chr11 manual_curation exon 29627870 29628364 . - . Parent=GSCOCT00032289001 | |
| 69342 chr11 manual_curation exon 29627244 29627453 . - . Parent=GSCOCT00032289001 | |
| 69343 chr11 manual_curation exon 29625438 29625514 . - . Parent=GSCOCT00032289001 | |
| 69344 chr11 manual_curation exon 29625008 29625314 . - . Parent=GSCOCT00032289001 | |
| 69345 chr11 manual_curation CDS 29627870 29627947 . - 0 Parent=GSCOCT00032289001 | |
| 69346 chr11 manual_curation CDS 29627244 29627453 . - 0 Parent=GSCOCT00032289001 | |
| 69347 chr11 manual_curation CDS 29625438 29625514 . - 0 Parent=GSCOCT00032289001 | |
| 69348 chr11 manual_curation CDS 29625170 29625314 . - 2 Parent=GSCOCT00032289001 | |
| 69349 chr11 manual_curation gene 29636295 29641750 . + . ID=GSCOCG00032287001;Name=Cc11_g12660 | |
| 69350 chr11 manual_curation mRNA 29636295 29641750 . + . ID=GSCOCT00032287001;Parent=GSCOCG00032287001;Name=Cc11_g12660 | |
| 69351 chr11 manual_curation polypeptide 29636295 29641750 . + . ID=GSCOCP00032287001;Dbxref=InterPro:IPR018249,InterPro:IPR019378,PFAM:PF10250,PROFILE:PS50222,SwissProt:Q8W486,TAIR:AT1G14020.1,TAIR:AT2G03280.2,TAIR:AT5G15740.1,TrEMBL:B9S911,TrEMBL:I1KMF7,TrEMBL:I1KMF8;Derives_from=GSCOCT00032287001;Name=Cc11_g12660;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative DUF246 domain-containing protein At1g04910,CC_functional_completeness:complete,CC_gene:At1g04910;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032287001~ Putative DUF246 domain-containing protein At1g04910~ At1g04910~ complete;original_location=complement(join(1706092..1706371%2C1704042..1704109%2C1703872..1703960%2C1703597..1703759%2C1703151..1703440%2C1701972..1702176%2C1701283..1701440%2C1700916..1701189));owner=coffea | |
| 69352 chr11 manual_curation exon 29641477 29641750 . + . Parent=GSCOCT00032287001 | |
| 69353 chr11 manual_curation exon 29641226 29641383 . + . Parent=GSCOCT00032287001 | |
| 69354 chr11 manual_curation exon 29640490 29640694 . + . Parent=GSCOCT00032287001 | |
| 69355 chr11 manual_curation exon 29639226 29639515 . + . Parent=GSCOCT00032287001 | |
| 69356 chr11 manual_curation exon 29638907 29639069 . + . Parent=GSCOCT00032287001 | |
| 69357 chr11 manual_curation exon 29638706 29638794 . + . Parent=GSCOCT00032287001 | |
| 69358 chr11 manual_curation exon 29638557 29638624 . + . Parent=GSCOCT00032287001 | |
| 69359 chr11 manual_curation exon 29636295 29636574 . + . Parent=GSCOCT00032287001 | |
| 69360 chr11 manual_curation CDS 29641477 29641750 . + 2 Parent=GSCOCT00032287001 | |
| 69361 chr11 manual_curation CDS 29641226 29641383 . + 0 Parent=GSCOCT00032287001 | |
| 69362 chr11 manual_curation CDS 29640490 29640694 . + 2 Parent=GSCOCT00032287001 | |
| 69363 chr11 manual_curation CDS 29639226 29639515 . + 0 Parent=GSCOCT00032287001 | |
| 69364 chr11 manual_curation CDS 29638907 29639069 . + 2 Parent=GSCOCT00032287001 | |
| 69365 chr11 manual_curation CDS 29638706 29638794 . + 0 Parent=GSCOCT00032287001 | |
| 69366 chr11 manual_curation CDS 29638557 29638624 . + 1 Parent=GSCOCT00032287001 | |
| 69367 chr11 manual_curation CDS 29636295 29636574 . + 0 Parent=GSCOCT00032287001 | |
| 69368 chr11 manual_curation gene 29641887 29647147 . - . ID=GSCOCG00032286001;Name=Cc11_g12670 | |
| 69369 chr11 manual_curation mRNA 29641887 29647147 . - . ID=GSCOCT00032286001;Parent=GSCOCG00032286001;Name=Cc11_g12670 | |
| 69370 chr11 manual_curation polypeptide 29643113 29647147 . - . ID=GSCOCP00032286001;Dbxref=InterPro:IPR001214,InterPro:IPR015353,PFAM:PF00856,PFAM:PF09273,SMART:SM00317,SwissProt:P94026,SwissProt:Q43088,SwissProt:Q9XI84,TAIR:AT1G14030.1,TAIR:AT3G07670.1,TAIR:AT4G20130.1,TrEMBL:A5AXD0,TrEMBL:B9S910,TrEMBL:D7TX24;Derives_from=GSCOCT00032286001;Name=Cc11_g12670;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.1.1.127,PRODUCT:Ribulose-1%2C5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase%2C chloroplastic,CC_functional_completeness:complete,CC_gene:RBCMT;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032286001~ Ribulose-1%2C5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase%2C chloroplastic~ RBCMT~ complete;original_location=join(1695519..1695552%2C1695645..1696221%2C1696341..1696369%2C1696709..1696920%2C1697597..1697722%2C1698386..1698790%2C1699344..1699553);owner=coffea | |
| 69371 chr11 manual_curation exon 29647114 29647147 . - . Parent=GSCOCT00032286001 | |
| 69372 chr11 manual_curation exon 29646445 29647021 . - . Parent=GSCOCT00032286001 | |
| 69373 chr11 manual_curation exon 29646297 29646325 . - . Parent=GSCOCT00032286001 | |
| 69374 chr11 manual_curation exon 29645746 29645957 . - . Parent=GSCOCT00032286001 | |
| 69375 chr11 manual_curation exon 29644944 29645069 . - . Parent=GSCOCT00032286001 | |
| 69376 chr11 manual_curation exon 29643876 29644280 . - . Parent=GSCOCT00032286001 | |
| 69377 chr11 manual_curation exon 29641887 29643322 . - . Parent=GSCOCT00032286001 | |
| 69378 chr11 manual_curation CDS 29647114 29647147 . - 0 Parent=GSCOCT00032286001 | |
| 69379 chr11 manual_curation CDS 29646445 29647021 . - 1 Parent=GSCOCT00032286001 | |
| 69380 chr11 manual_curation CDS 29646297 29646325 . - 2 Parent=GSCOCT00032286001 | |
| 69381 chr11 manual_curation CDS 29645746 29645957 . - 1 Parent=GSCOCT00032286001 | |
| 69382 chr11 manual_curation CDS 29644944 29645069 . - 0 Parent=GSCOCT00032286001 | |
| 69383 chr11 manual_curation CDS 29643876 29644280 . - 0 Parent=GSCOCT00032286001 | |
| 69384 chr11 manual_curation CDS 29643113 29643322 . - 0 Parent=GSCOCT00032286001 | |
| 69385 chr11 manual_curation gene 29649494 29650579 . - . ID=GSCOCG00032285001;Name=Cc11_g12680 | |
| 69386 chr11 manual_curation mRNA 29649494 29650579 . - . ID=GSCOCT00032285001;Parent=GSCOCG00032285001;Name=Cc11_g12680 | |
| 69387 chr11 manual_curation polypeptide 29649761 29650579 . - . ID=GSCOCP00032285001;Dbxref=InterPro:IPR012891,PFAM:PF07802,TAIR:AT1G14060.1,TAIR:AT5G02210.1,TAIR:AT5G57640.1,TrEMBL:B9IQH0,TrEMBL:B9S907,TrEMBL:C6T419;Derives_from=GSCOCT00032285001;Name=Cc11_g12680;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032285001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1692087..1692905;owner=coffea | |
| 69388 chr11 manual_curation exon 29649494 29650579 . - . Parent=GSCOCT00032285001 | |
| 69389 chr11 manual_curation CDS 29649761 29650579 . - 0 Parent=GSCOCT00032285001 | |
| 69390 chr11 manual_curation gene 29738326 29739992 . - . ID=GSCOCG00032284001;Name=Cc11_g12690 | |
| 69391 chr11 manual_curation mRNA 29738326 29739992 . - . ID=GSCOCT00032284001;Parent=GSCOCG00032284001;Name=Cc11_g12690 | |
| 69392 chr11 manual_curation polypeptide 29738326 29739992 . - . ID=GSCOCP00032284001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001005,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR014778,InterPro:IPR015495,InterPro:IPR017930,PANTHER:PTHR10641,PFAM:PF00249,PROFILE:PS51294,SMART:SM00717,SUPERFAMILY:SSF46689,SwissProt:Q8GWP0,SwissProt:Q9FLR1,SwissProt:Q9SPG2,TAIR:AT3G01140.1,TAIR:AT3G61250.1,TAIR:AT5G15310.1,TrEMBL:E2DEL7,TrEMBL:Q84U53,TrEMBL:Q9XFM9;Derives_from=GSCOCT00032284001;Name=Cc11_g12690;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:myb domain protein 16,CC_functional_completeness:complete,CC_gene:MYB28,CC_gene:MYB29,CC_gene:MYB39;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032284001~ myb domain protein 16~ MYB28~ complete;original_location=join(1602674..1602806%2C1602974..1603103%2C1603449..1603862%2C1604046..1604340);owner=coffea | |
| 69393 chr11 manual_curation exon 29739860 29739992 . - . Parent=GSCOCT00032284001 | |
| 69394 chr11 manual_curation exon 29739563 29739692 . - . Parent=GSCOCT00032284001 | |
| 69395 chr11 manual_curation exon 29738804 29739217 . - . Parent=GSCOCT00032284001 | |
| 69396 chr11 manual_curation exon 29738326 29738620 . - . Parent=GSCOCT00032284001 | |
| 69397 chr11 manual_curation CDS 29739860 29739992 . - 0 Parent=GSCOCT00032284001 | |
| 69398 chr11 manual_curation CDS 29739563 29739692 . - 1 Parent=GSCOCT00032284001 | |
| 69399 chr11 manual_curation CDS 29738804 29739217 . - 2 Parent=GSCOCT00032284001 | |
| 69400 chr11 manual_curation CDS 29738326 29738620 . - 2 Parent=GSCOCT00032284001 | |
| 69401 chr11 manual_curation gene 29745235 29748184 . - . ID=GSCOCG00032283001;Name=Cc11_g12700 | |
| 69402 chr11 manual_curation mRNA 29745235 29748184 . - . ID=GSCOCT00032283001;Parent=GSCOCG00032283001;Name=Cc11_g12700 | |
| 69403 chr11 manual_curation polypeptide 29745507 29748026 . - . ID=GSCOCP00032283001;Dbxref=InterPro:IPR001993,InterPro:IPR002067,InterPro:IPR002113,InterPro:IPR018108,PANTHER:PTHR11896,PFAM:PF00153,PRINTS:PR00926,PRINTS:PR00927,PROFILE:PS50920,SUPERFAMILY:SSF103506,SwissProt:B0G143,SwissProt:O95847,SwissProt:Q5SVS4,TAIR:AT1G14140.1,TAIR:AT4G24570.1,TAIR:AT5G58970.1,TrEMBL:A5C688,TrEMBL:B9HXX7,TrEMBL:D7TN58;Derives_from=GSCOCT00032283001;Name=Cc11_g12700;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0005488,GO:0005743,GO:0006810,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Putative Mitochondrial uncoupling protein 4,CC_functional_completeness:complete,CC_gene:SLC25A27,CC_gene:ucpB,CC_gene:SLC25A30;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032283001~ Putative Mitochondrial uncoupling protein 4~ SLC25A27~ complete;original_location=join(1594640..1594966%2C1596617..1597159);owner=coffea | |
| 69404 chr11 manual_curation exon 29747700 29748184 . - . Parent=GSCOCT00032283001 | |
| 69405 chr11 manual_curation exon 29745235 29746049 . - . Parent=GSCOCT00032283001 | |
| 69406 chr11 manual_curation CDS 29747700 29748026 . - 0 Parent=GSCOCT00032283001 | |
| 69407 chr11 manual_curation CDS 29745507 29746049 . - 0 Parent=GSCOCT00032283001 | |
| 69408 chr11 manual_curation gene 29748526 29749633 . - . ID=GSCOCG00032282001;Name=Cc11_g12710 | |
| 69409 chr11 manual_curation mRNA 29748526 29749633 . - . ID=GSCOCT00032282001;Parent=GSCOCG00032282001;Name=Cc11_g12710 | |
| 69410 chr11 manual_curation polypeptide 29749013 29749633 . - . ID=GSCOCP00032282001;Derives_from=GSCOCT00032282001;Name=Cc11_g12710;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032282001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(1593033..1593091%2C1593446..1593653);owner=coffea | |
| 69411 chr11 manual_curation exon 29749575 29749633 . - . Parent=GSCOCT00032282001 | |
| 69412 chr11 manual_curation exon 29748526 29749220 . - . Parent=GSCOCT00032282001 | |
| 69413 chr11 manual_curation CDS 29749575 29749633 . - 0 Parent=GSCOCT00032282001 | |
| 69414 chr11 manual_curation CDS 29749013 29749220 . - 2 Parent=GSCOCT00032282001 | |
| 69415 chr11 manual_curation gene 29753156 29760963 . + . ID=GSCOCG00032280001;Name=Cc11_g12720 | |
| 69416 chr11 manual_curation mRNA 29753156 29760963 . + . ID=GSCOCT00032280001;Parent=GSCOCG00032280001;Name=Cc11_g12720 | |
| 69417 chr11 manual_curation polypeptide 29753285 29760963 . + . ID=GSCOCP00032280001;Dbxref=InterPro:IPR001373,InterPro:IPR014786,InterPro:IPR016158,PFAM:PF00888,PFAM:PF08672,PROFILE:PS50069,SMART:SM00182,SUPERFAMILY:SSF75632,SwissProt:Q8BZQ7,SwissProt:Q8H1U5,SwissProt:Q9UJX6,TAIR:AT2G04660.1,TAIR:AT4G02570.1,TrEMBL:B9S900,TrEMBL:D7TN60,TrEMBL:Q6F2D1;Derives_from=GSCOCT00032280001;Name=Cc11_g12720;Ontology_term=CC_evidence_code:ISS,GO:0006511,GO:0031461,GO:0031625,CC_EC_number:missing_EC_number,PRODUCT:Anaphase-promoting complex subunit 2,CC_functional_completeness:complete,CC_gene:APC2,CC_gene:ANAPC2,CC_gene:Anapc2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032280001~ Anaphase-promoting complex subunit 2~ APC2~ complete;original_location=complement(join(1589148..1589381%2C1588894..1588983%2C1588342..1588573%2C1587511..1587806%2C1587290..1587361%2C1586685..1586929%2C1585310..1585726%2C1584995..1585196%2C1584753..1584867%2C1584536..1584612%2C1583785..1583904%2C1583578..1583666%2C1583387..1583468%2C1582356..1582547%2C1581910..1581978%2C1581703..1581825));owner=coffea | |
| 69418 chr11 manual_curation exon 29760841 29760963 . + . Parent=GSCOCT00032280001 | |
| 69419 chr11 manual_curation exon 29760688 29760756 . + . Parent=GSCOCT00032280001 | |
| 69420 chr11 manual_curation exon 29760119 29760310 . + . Parent=GSCOCT00032280001 | |
| 69421 chr11 manual_curation exon 29759198 29759279 . + . Parent=GSCOCT00032280001 | |
| 69422 chr11 manual_curation exon 29759000 29759088 . + . Parent=GSCOCT00032280001 | |
| 69423 chr11 manual_curation exon 29758762 29758881 . + . Parent=GSCOCT00032280001 | |
| 69424 chr11 manual_curation exon 29758054 29758130 . + . Parent=GSCOCT00032280001 | |
| 69425 chr11 manual_curation exon 29757799 29757913 . + . Parent=GSCOCT00032280001 | |
| 69426 chr11 manual_curation exon 29757470 29757671 . + . Parent=GSCOCT00032280001 | |
| 69427 chr11 manual_curation exon 29756940 29757356 . + . Parent=GSCOCT00032280001 | |
| 69428 chr11 manual_curation exon 29755737 29755981 . + . Parent=GSCOCT00032280001 | |
| 69429 chr11 manual_curation exon 29755305 29755376 . + . Parent=GSCOCT00032280001 | |
| 69430 chr11 manual_curation exon 29754860 29755155 . + . Parent=GSCOCT00032280001 | |
| 69431 chr11 manual_curation exon 29754093 29754324 . + . Parent=GSCOCT00032280001 | |
| 69432 chr11 manual_curation exon 29753683 29753772 . + . Parent=GSCOCT00032280001 | |
| 69433 chr11 manual_curation exon 29753156 29753518 . + . Parent=GSCOCT00032280001 | |
| 69434 chr11 manual_curation CDS 29760841 29760963 . + 0 Parent=GSCOCT00032280001 | |
| 69435 chr11 manual_curation CDS 29760688 29760756 . + 0 Parent=GSCOCT00032280001 | |
| 69436 chr11 manual_curation CDS 29760119 29760310 . + 0 Parent=GSCOCT00032280001 | |
| 69437 chr11 manual_curation CDS 29759198 29759279 . + 2 Parent=GSCOCT00032280001 | |
| 69438 chr11 manual_curation CDS 29759000 29759088 . + 0 Parent=GSCOCT00032280001 | |
| 69439 chr11 manual_curation CDS 29758762 29758881 . + 0 Parent=GSCOCT00032280001 | |
| 69440 chr11 manual_curation CDS 29758054 29758130 . + 1 Parent=GSCOCT00032280001 | |
| 69441 chr11 manual_curation CDS 29757799 29757913 . + 0 Parent=GSCOCT00032280001 | |
| 69442 chr11 manual_curation CDS 29757470 29757671 . + 2 Parent=GSCOCT00032280001 | |
| 69443 chr11 manual_curation CDS 29756940 29757356 . + 2 Parent=GSCOCT00032280001 | |
| 69444 chr11 manual_curation CDS 29755737 29755981 . + 0 Parent=GSCOCT00032280001 | |
| 69445 chr11 manual_curation CDS 29755305 29755376 . + 0 Parent=GSCOCT00032280001 | |
| 69446 chr11 manual_curation CDS 29754860 29755155 . + 1 Parent=GSCOCT00032280001 | |
| 69447 chr11 manual_curation CDS 29754093 29754324 . + 0 Parent=GSCOCT00032280001 | |
| 69448 chr11 manual_curation CDS 29753683 29753772 . + 0 Parent=GSCOCT00032280001 | |
| 69449 chr11 manual_curation CDS 29753285 29753518 . + 0 Parent=GSCOCT00032280001 | |
| 69450 chr11 manual_curation gene 29762072 29763682 . + . ID=GSCOCG00032278001;Name=Cc11_g12730 | |
| 69451 chr11 manual_curation mRNA 29762072 29763682 . + . ID=GSCOCT00032278001;Parent=GSCOCG00032278001;Name=Cc11_g12730 | |
| 69452 chr11 manual_curation polypeptide 29762072 29763682 . + . ID=GSCOCP00032278001;Dbxref=GENE3D:G3DSA:1.25.40.10,InterPro:IPR001214,InterPro:IPR001440,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR019734,PFAM:PF00515,PFAM:PF00856,PROFILE:PS50280,PROFILE:PS50293,SMART:SM00028,SMART:SM00317,SwissProt:Q9CWR2,TAIR:AT1G26760.1,TrEMBL:B9HI95,TrEMBL:B9S8Z9,TrEMBL:F6H7J2;Derives_from=GSCOCT00032278001;Name=Cc11_g12730;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:SET domain protein 35,CC_functional_completeness:complete,CC_gene:Smyd3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032278001~ SET domain protein 35~ Smyd3~ complete;original_location=complement(1578984..1580594);owner=coffea | |
| 69453 chr11 manual_curation exon 29762072 29763682 . + . Parent=GSCOCT00032278001 | |
| 69454 chr11 manual_curation CDS 29762072 29763682 . + 0 Parent=GSCOCT00032278001 | |
| 69455 chr11 manual_curation gene 29769986 29771396 . + . ID=GSCOCG00032276001;Name=Cc11_g12740 | |
| 69456 chr11 manual_curation mRNA 29769986 29771396 . + . ID=GSCOCT00032276001;Parent=GSCOCG00032276001;Name=Cc11_g12740 | |
| 69457 chr11 manual_curation polypeptide 29770161 29771188 . + . ID=GSCOCP00032276001;Dbxref=InterPro:IPR003441,PFAM:PF02365,PROFILE:PS51005,SUPERFAMILY:SSF101941,SwissProt:O49255,SwissProt:Q52QH4,SwissProt:Q9LDY8,TAIR:AT1G61110.1,TAIR:AT1G69490.1,TAIR:AT3G15510.1,TrEMBL:B9S8Z7,TrEMBL:D0E574,TrEMBL:D7TN62;Derives_from=GSCOCT00032276001;Name=Cc11_g12740;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:NAC domain-containing protein 29,CC_functional_completeness:modules,CC_gene:NAC029,CC_gene:NAC68,CC_gene:NAC055;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032276001~ NAC domain-containing protein 29~ NAC029~ modules;original_location=complement(join(1572340..1572505%2C1571944..1572224%2C1571478..1571855));owner=coffea | |
| 69458 chr11 manual_curation exon 29770811 29771396 . + . Parent=GSCOCT00032276001 | |
| 69459 chr11 manual_curation exon 29770442 29770722 . + . Parent=GSCOCT00032276001 | |
| 69460 chr11 manual_curation exon 29769986 29770326 . + . Parent=GSCOCT00032276001 | |
| 69461 chr11 manual_curation CDS 29770811 29771188 . + 0 Parent=GSCOCT00032276001 | |
| 69462 chr11 manual_curation CDS 29770442 29770722 . + 1 Parent=GSCOCT00032276001 | |
| 69463 chr11 manual_curation CDS 29770161 29770326 . + 0 Parent=GSCOCT00032276001 | |
| 69464 chr11 manual_curation gene 29774687 29777276 . + . ID=GSCOCG00032275001;Name=Cc11_g12750 | |
| 69465 chr11 manual_curation mRNA 29774687 29777276 . + . ID=GSCOCT00032275001;Parent=GSCOCG00032275001;Name=Cc11_g12750 | |
| 69466 chr11 manual_curation polypeptide 29774835 29777276 . + . ID=GSCOCP00032275001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,SUPERFAMILY:SSF48264,SwissProt:O23066,SwissProt:Q50EK3,SwissProt:Q9FMY1,TAIR:AT1G69500.1,TAIR:AT2G44890.1,TAIR:AT2G45510.1,TrEMBL:B9S8Z6,TrEMBL:D7KX21,TrEMBL:Q9C788;Derives_from=GSCOCT00032275001;Name=Cc11_g12750;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.14.1,PRODUCT:Putative Cytochrome P450 704C1,CC_functional_completeness:complete,CC_gene:CYP704C1,CC_gene:CYP86A2,CC_gene:CYP86B1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032275001~ Putative Cytochrome P450 704C1~ CYP704C1~ complete;original_location=complement(join(1567547..1567831%2C1567057..1567272%2C1566511..1566807%2C1566023..1566409%2C1565748..1565948%2C1565390..1565578));owner=coffea | |
| 69467 chr11 manual_curation exon 29777088 29777276 . + . Parent=GSCOCT00032275001 | |
| 69468 chr11 manual_curation exon 29776718 29776918 . + . Parent=GSCOCT00032275001 | |
| 69469 chr11 manual_curation exon 29776257 29776643 . + . Parent=GSCOCT00032275001 | |
| 69470 chr11 manual_curation exon 29775859 29776155 . + . Parent=GSCOCT00032275001 | |
| 69471 chr11 manual_curation exon 29775394 29775609 . + . Parent=GSCOCT00032275001 | |
| 69472 chr11 manual_curation exon 29774687 29775119 . + . Parent=GSCOCT00032275001 | |
| 69473 chr11 manual_curation CDS 29777088 29777276 . + 0 Parent=GSCOCT00032275001 | |
| 69474 chr11 manual_curation CDS 29776718 29776918 . + 0 Parent=GSCOCT00032275001 | |
| 69475 chr11 manual_curation CDS 29776257 29776643 . + 0 Parent=GSCOCT00032275001 | |
| 69476 chr11 manual_curation CDS 29775859 29776155 . + 0 Parent=GSCOCT00032275001 | |
| 69477 chr11 manual_curation CDS 29775394 29775609 . + 0 Parent=GSCOCT00032275001 | |
| 69478 chr11 manual_curation CDS 29774835 29775119 . + 0 Parent=GSCOCT00032275001 | |
| 69479 chr11 manual_curation gene 29779426 29780723 . + . ID=GSCOCG00032273001;Name=Cc11_g12760 | |
| 69480 chr11 manual_curation mRNA 29779426 29780723 . + . ID=GSCOCT00032273001;Parent=GSCOCG00032273001;Name=Cc11_g12760 | |
| 69481 chr11 manual_curation polypeptide 29779596 29780279 . + . ID=GSCOCP00032273001;Dbxref=InterPro:IPR008797,PFAM:PF05757,TAIR:AT1G14150.1,TrEMBL:B9HXY5,TrEMBL:B9S8Z4,TrEMBL:Q5NRN3;Derives_from=GSCOCT00032273001;Name=Cc11_g12760;Ontology_term=CC_evidence_code:ISS,GO:0005509,GO:0009654,GO:0015979,GO:0019898,CC_EC_number:missing_EC_number,PRODUCT:PsbQ-like 2,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032273001~ PsbQ-like 2~ unknown_gene~ complete;original_location=complement(join(1562585..1563070%2C1562387..1562485));owner=coffea | |
| 69482 chr11 manual_curation exon 29780181 29780723 . + . Parent=GSCOCT00032273001 | |
| 69483 chr11 manual_curation exon 29779426 29780081 . + . Parent=GSCOCT00032273001 | |
| 69484 chr11 manual_curation CDS 29780181 29780279 . + 0 Parent=GSCOCT00032273001 | |
| 69485 chr11 manual_curation CDS 29779596 29780081 . + 0 Parent=GSCOCT00032273001 | |
| 69486 chr11 manual_curation gene 29780971 29781859 . - . ID=GSCOCG00032272001;Name=Cc11_g12770 | |
| 69487 chr11 manual_curation mRNA 29780971 29781859 . - . ID=GSCOCT00032272001;Parent=GSCOCG00032272001;Name=Cc11_g12770 | |
| 69488 chr11 manual_curation polypeptide 29780971 29781797 . - . ID=GSCOCP00032272001;Dbxref=InterPro:IPR006459,InterPro:IPR006702,PFAM:PF04535,SwissProt:P0DI35,SwissProt:Q5NRN4,SwissProt:Q60D27,TAIR:AT1G14160.1,TAIR:AT2G27370.1,TAIR:AT5G15290.1,TIGRFAMs:TIGR01569,TrEMBL:I1JE64,TrEMBL:I1NDP1,TrEMBL:I1Q0X6;Derives_from=GSCOCT00032272001;Name=Cc11_g12770;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:CASP-like protein 1,CC_functional_completeness:complete,CC_gene:SDM1_58t00016,CC_gene:SDM1_55t00014;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032272001~ CASP-like protein 1~ SDM1_58t00016~ complete;original_location=join(1560869..1561086%2C1561223..1561346%2C1561480..1561695);owner=coffea | |
| 69489 chr11 manual_curation exon 29781580 29781859 . - . Parent=GSCOCT00032272001 | |
| 69490 chr11 manual_curation exon 29781320 29781443 . - . Parent=GSCOCT00032272001 | |
| 69491 chr11 manual_curation exon 29780971 29781186 . - . Parent=GSCOCT00032272001 | |
| 69492 chr11 manual_curation CDS 29781580 29781797 . - 0 Parent=GSCOCT00032272001 | |
| 69493 chr11 manual_curation CDS 29781320 29781443 . - 2 Parent=GSCOCT00032272001 | |
| 69494 chr11 manual_curation CDS 29780971 29781186 . - 0 Parent=GSCOCT00032272001 | |
| 69495 chr11 manual_curation gene 29785203 29786740 . + . ID=GSCOCG00032271001;Name=Cc11_g12780 | |
| 69496 chr11 manual_curation mRNA 29785203 29786740 . + . ID=GSCOCT00032271001;Parent=GSCOCG00032271001;Name=Cc11_g12780 | |
| 69497 chr11 manual_curation polypeptide 29785447 29786583 . + . ID=GSCOCP00032271001;Dbxref=InterPro:IPR006760,PFAM:PF04667,TAIR:AT1G69510.1,TAIR:AT4G16146.1,TAIR:AT5G64130.3,TrEMBL:A9NL25,TrEMBL:B9S8Z2,TrEMBL:D7TN67;Derives_from=GSCOCT00032271001;Name=Cc11_g12780;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative cAMP-regulated phosphoprotein 19-related protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032271001~ Putative cAMP-regulated phosphoprotein 19-related protein~ unknown_gene~ modules;original_location=complement(join(1557064..1557219%2C1556850..1556912%2C1556728..1556775%2C1556537..1556590%2C1556307..1556373%2C1556083..1556228));owner=coffea | |
| 69498 chr11 manual_curation exon 29786438 29786740 . + . Parent=GSCOCT00032271001 | |
| 69499 chr11 manual_curation exon 29786293 29786359 . + . Parent=GSCOCT00032271001 | |
| 69500 chr11 manual_curation exon 29786076 29786129 . + . Parent=GSCOCT00032271001 | |
| 69501 chr11 manual_curation exon 29785891 29785938 . + . Parent=GSCOCT00032271001 | |
| 69502 chr11 manual_curation exon 29785754 29785816 . + . Parent=GSCOCT00032271001 | |
| 69503 chr11 manual_curation exon 29785203 29785602 . + . Parent=GSCOCT00032271001 | |
| 69504 chr11 manual_curation CDS 29786438 29786583 . + 1 Parent=GSCOCT00032271001 | |
| 69505 chr11 manual_curation CDS 29786293 29786359 . + 0 Parent=GSCOCT00032271001 | |
| 69506 chr11 manual_curation CDS 29786076 29786129 . + 0 Parent=GSCOCT00032271001 | |
| 69507 chr11 manual_curation CDS 29785891 29785938 . + 0 Parent=GSCOCT00032271001 | |
| 69508 chr11 manual_curation CDS 29785754 29785816 . + 0 Parent=GSCOCT00032271001 | |
| 69509 chr11 manual_curation CDS 29785447 29785602 . + 0 Parent=GSCOCT00032271001 | |
| 69510 chr11 manual_curation gene 29788569 29792800 . - . ID=GSCOCG00032269001;Name=Cc11_g12790 | |
| 69511 chr11 manual_curation mRNA 29788569 29792800 . - . ID=GSCOCT00032269001;Parent=GSCOCG00032269001;Name=Cc11_g12790 | |
| 69512 chr11 manual_curation polypeptide 29789123 29792081 . - . ID=GSCOCP00032269001;Dbxref=InterPro:IPR004087,InterPro:IPR004088,InterPro:IPR018111,PFAM:PF00013,PROFILE:PS50084,SMART:SM00322,SwissProt:P57724,SwissProt:P58223,SwissProt:Q9PW80,TAIR:AT1G14170.3,TAIR:AT5G15270.2,TAIR:AT5G46190.1,TrEMBL:F6HPQ0,TrEMBL:Q5NRN6,TrEMBL:Q60D29;Derives_from=GSCOCT00032269001;Name=Cc11_g12790;Ontology_term=CC_evidence_code:ISS,GO:0003723,CC_EC_number:missing_EC_number,PRODUCT:Putative KH domain-containing protein At4g18375,CC_functional_completeness:complete,CC_gene:At4g18375,CC_gene:igf2bp3,CC_gene:Pcbp4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032269001~ Putative KH domain-containing protein At4g18375~ At4g18375~ complete;original_location=join(1550585..1551163%2C1551847..1552236%2C1552364..1552618%2C1552821..1553090%2C1553263..1553330%2C1553495..1553543);owner=coffea | |
| 69513 chr11 manual_curation exon 29791503 29792800 . - . Parent=GSCOCT00032269001 | |
| 69514 chr11 manual_curation exon 29790430 29790819 . - . Parent=GSCOCT00032269001 | |
| 69515 chr11 manual_curation exon 29790048 29790302 . - . Parent=GSCOCT00032269001 | |
| 69516 chr11 manual_curation exon 29789576 29789845 . - . Parent=GSCOCT00032269001 | |
| 69517 chr11 manual_curation exon 29789336 29789403 . - . Parent=GSCOCT00032269001 | |
| 69518 chr11 manual_curation exon 29788569 29789171 . - . Parent=GSCOCT00032269001 | |
| 69519 chr11 manual_curation CDS 29791503 29792081 . - 0 Parent=GSCOCT00032269001 | |
| 69520 chr11 manual_curation CDS 29790430 29790819 . - 0 Parent=GSCOCT00032269001 | |
| 69521 chr11 manual_curation CDS 29790048 29790302 . - 0 Parent=GSCOCT00032269001 | |
| 69522 chr11 manual_curation CDS 29789576 29789845 . - 0 Parent=GSCOCT00032269001 | |
| 69523 chr11 manual_curation CDS 29789336 29789403 . - 0 Parent=GSCOCT00032269001 | |
| 69524 chr11 manual_curation CDS 29789123 29789171 . - 2 Parent=GSCOCT00032269001 | |
| 69525 chr11 manual_curation gene 29793813 29796976 . + . ID=GSCOCG00032267001;Name=Cc11_g12800 | |
| 69526 chr11 manual_curation mRNA 29793813 29796976 . + . ID=GSCOCT00032267001;Parent=GSCOCG00032267001;Name=Cc11_g12800 | |
| 69527 chr11 manual_curation polypeptide 29793963 29796789 . + . ID=GSCOCP00032267001;Dbxref=InterPro:IPR013216,PFAM:PF08241,SwissProt:Q562C4,SwissProt:Q9DD20,SwissProt:Q9H8H3,TAIR:AT1G69520.1,TAIR:AT1G69523.1,TAIR:AT1G69526.2,TrEMBL:B9HI85,TrEMBL:D7TN69,TrEMBL:I1JE62;Derives_from=GSCOCT00032267001;Name=Cc11_g12800;Ontology_term=CC_evidence_code:ISS,GO:0008152,GO:0008168,CC_EC_number:2.1.1.17,PRODUCT:Putative Methyltransferase-like protein 7A,CC_functional_completeness:modules,CC_gene:METTL7A,CC_gene:Mettl7b;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032267001~ Putative Methyltransferase-like protein 7A~ METTL7A~ modules;original_location=complement(join(1548404..1548703%2C1547458..1547553%2C1547150..1547368%2C1546485..1546581%2C1546194..1546256%2C1545877..1546070));owner=coffea | |
| 69528 chr11 manual_curation exon 29796596 29796976 . + . Parent=GSCOCT00032267001 | |
| 69529 chr11 manual_curation exon 29796410 29796472 . + . Parent=GSCOCT00032267001 | |
| 69530 chr11 manual_curation exon 29796085 29796181 . + . Parent=GSCOCT00032267001 | |
| 69531 chr11 manual_curation exon 29795298 29795516 . + . Parent=GSCOCT00032267001 | |
| 69532 chr11 manual_curation exon 29795113 29795208 . + . Parent=GSCOCT00032267001 | |
| 69533 chr11 manual_curation exon 29793813 29794262 . + . Parent=GSCOCT00032267001 | |
| 69534 chr11 manual_curation CDS 29796596 29796789 . + 1 Parent=GSCOCT00032267001 | |
| 69535 chr11 manual_curation CDS 29796410 29796472 . + 1 Parent=GSCOCT00032267001 | |
| 69536 chr11 manual_curation CDS 29796085 29796181 . + 0 Parent=GSCOCT00032267001 | |
| 69537 chr11 manual_curation CDS 29795298 29795516 . + 0 Parent=GSCOCT00032267001 | |
| 69538 chr11 manual_curation CDS 29795113 29795208 . + 0 Parent=GSCOCT00032267001 | |
| 69539 chr11 manual_curation CDS 29793963 29794262 . + 0 Parent=GSCOCT00032267001 | |
| 69540 chr11 manual_curation gene 29798195 29801204 . + . ID=GSCOCG00032266001;Name=Cc11_g12810 | |
| 69541 chr11 manual_curation mRNA 29798195 29801204 . + . ID=GSCOCT00032266001;Parent=GSCOCG00032266001;Name=Cc11_g12810 | |
| 69542 chr11 manual_curation polypeptide 29800309 29800962 . + . ID=GSCOCP00032266001;Dbxref=GENE3D:G3DSA:3.30.1390.10,InterPro:IPR013823,InterPro:IPR014719,InterPro:IPR015608,PANTHER:PTHR11809:SF6,PFAM:PF00542,PRODOM:PD001326,SUPERFAMILY:SSF54736,SwissProt:A2C031,SwissProt:A9BDG4,SwissProt:Q9L5W4,TAIR:AT1G70190.1,TAIR:AT3G06040.1,TAIR:AT4G37660.1,TrEMBL:B9RB19,TrEMBL:F6GSQ3,TrEMBL:Q3HVP5;Derives_from=GSCOCT00032266001;Name=Cc11_g12810;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein,CC_functional_completeness:complete,CC_gene:rplL;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032266001~ Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein~ rplL~ complete;original_location=complement(1541704..1542357);owner=coffea | |
| 69543 chr11 manual_curation exon 29798195 29798445 . + . Parent=GSCOCT00032266001 | |
| 69544 chr11 manual_curation exon 29800157 29801204 . + . Parent=GSCOCT00032266001 | |
| 69545 chr11 manual_curation CDS 29800309 29800962 . + 0 Parent=GSCOCT00032266001 | |
| 69546 chr11 manual_curation gene 29806866 29808434 . + . ID=GSCOCG00032264001;Name=Cc11_g12820 | |
| 69547 chr11 manual_curation mRNA 29806866 29808434 . + . ID=GSCOCT00032264001;Parent=GSCOCG00032264001;Name=Cc11_g12820 | |
| 69548 chr11 manual_curation polypeptide 29807138 29808080 . + . ID=GSCOCP00032264001;Dbxref=InterPro:IPR001841,PROFILE:PS50089,SMART:SM00184,TAIR:AT1G14180.1,TAIR:AT4G39140.1,TAIR:AT5G18260.1,TrEMBL:I1JE61,TrEMBL:Q0KII5,TrEMBL:Q60D31;Derives_from=GSCOCT00032264001;Name=Cc11_g12820;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:RING/U-box superfamily protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032264001~ RING/U-box superfamily protein~ unknown_gene~ fragment;original_location=complement(join(1535523..1535528%2C1534586..1535443));owner=coffea | |
| 69549 chr11 manual_curation exon 29807223 29808434 . + . Parent=GSCOCT00032264001 | |
| 69550 chr11 manual_curation exon 29806866 29807143 . + . Parent=GSCOCT00032264001 | |
| 69551 chr11 manual_curation CDS 29807223 29808080 . + 0 Parent=GSCOCT00032264001 | |
| 69552 chr11 manual_curation CDS 29807138 29807143 . + 0 Parent=GSCOCT00032264001 | |
| 69553 chr11 manual_curation gene 29820888 29823351 . + . ID=GSCOCG00032263001;Name=Cc11_g12830 | |
| 69554 chr11 manual_curation mRNA 29820888 29823351 . + . ID=GSCOCT00032263001;Parent=GSCOCG00032263001;Name=Cc11_g12830 | |
| 69555 chr11 manual_curation polypeptide 29820888 29822760 . + . ID=GSCOCP00032263001;Dbxref=GENE3D:G3DSA:2.40.40.40,GENE3D:G3DSA:2.60.40.760,InterPro:IPR002963,InterPro:IPR005132,InterPro:IPR007112,InterPro:IPR007117,InterPro:IPR007118,InterPro:IPR009009,InterPro:IPR014734,PFAM:PF01357,PFAM:PF03330,PRINTS:PR01225,PRINTS:PR01226,PROFILE:PS50842,PROFILE:PS50843,SUPERFAMILY:SSF49590,SUPERFAMILY:SSF50685,SwissProt:O80622,SwissProt:Q9C554,SwissProt:Q9LDR9,TAIR:AT1G26770.2,TAIR:AT1G69530.3,TAIR:AT2G03090.1,TrEMBL:G4XZX4;Derives_from=GSCOCT00032263001;Name=Cc11_g12830;Ontology_term=CC_evidence_code:ISS,GO:0005576,GO:0009664,CC_EC_number:missing_EC_number,PRODUCT:Expansin-A1,CC_functional_completeness:modules,CC_gene:EXPA1,CC_gene:EXPA15,CC_gene:EXPA10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032263001~ Expansin-A1~ EXPA1~ modules;original_location=complement(join(1521698..1521778%2C1521489..1521640%2C1521189..1521322%2C1520783..1521092%2C1519906..1520212));owner=coffea | |
| 69556 chr11 manual_curation exon 29822454 29823351 . + . Parent=GSCOCT00032263001 | |
| 69557 chr11 manual_curation exon 29821574 29821883 . + . Parent=GSCOCT00032263001 | |
| 69558 chr11 manual_curation exon 29821344 29821477 . + . Parent=GSCOCT00032263001 | |
| 69559 chr11 manual_curation exon 29821026 29821177 . + . Parent=GSCOCT00032263001 | |
| 69560 chr11 manual_curation exon 29820888 29820968 . + . Parent=GSCOCT00032263001 | |
| 69561 chr11 manual_curation CDS 29822454 29822760 . + 2 Parent=GSCOCT00032263001 | |
| 69562 chr11 manual_curation CDS 29821574 29821883 . + 1 Parent=GSCOCT00032263001 | |
| 69563 chr11 manual_curation CDS 29821344 29821477 . + 2 Parent=GSCOCT00032263001 | |
| 69564 chr11 manual_curation CDS 29821026 29821177 . + 0 Parent=GSCOCT00032263001 | |
| 69565 chr11 manual_curation CDS 29820888 29820968 . + 0 Parent=GSCOCT00032263001 | |
| 69566 chr11 manual_curation gene 29829755 29830684 . + . ID=GSCOCG00032259001;Name=Cc11_g12840 | |
| 69567 chr11 manual_curation mRNA 29829755 29830684 . + . ID=GSCOCT00032259001;Parent=GSCOCG00032259001;Name=Cc11_g12840 | |
| 69568 chr11 manual_curation polypeptide 29829755 29830684 . + . ID=GSCOCP00032259001;Dbxref=InterPro:IPR003690,PFAM:PF02536,SMART:SM00733,TAIR:AT2G03050.1,TAIR:AT2G34620.1,TAIR:AT2G36000.1,TrEMBL:F6HGB3,TrEMBL:Q5NRP5,TrEMBL:Q60D34;Derives_from=GSCOCT00032259001;Name=Cc11_g12840;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Mitochondrial transcription termination factor family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032259001~ Mitochondrial transcription termination factor family protein~ unknown_gene~ complete;original_location=complement(1511982..1512911);owner=coffea | |
| 69569 chr11 manual_curation exon 29829755 29830684 . + . Parent=GSCOCT00032259001 | |
| 69570 chr11 manual_curation CDS 29829755 29830684 . + 0 Parent=GSCOCT00032259001 | |
| 69571 chr11 manual_curation gene 29844354 29846395 . + . ID=GSCOCG00032257001;Name=Cc11_g12850 | |
| 69572 chr11 manual_curation mRNA 29844354 29846395 . + . ID=GSCOCT00032257001;Parent=GSCOCG00032257001;Name=Cc11_g12850 | |
| 69573 chr11 manual_curation polypeptide 29844354 29846395 . + . ID=GSCOCP00032257001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001005,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR014778,InterPro:IPR015495,InterPro:IPR017930,PANTHER:PTHR10641,PFAM:PF00249,PROFILE:PS51294,SMART:SM00717,SUPERFAMILY:SSF46689,SwissProt:B0G0Y5,SwissProt:P52551,SwissProt:Q9FDW1,TAIR:AT1G69560.1,TAIR:AT3G29020.2,TrEMBL:B9HI82,TrEMBL:B9HXZ2,TrEMBL:F6HPQ3;Derives_from=GSCOCT00032257001;Name=Cc11_g12850;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:MYB44,CC_gene:mybAA,CC_gene:mybl2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032257001~ Putative uncharacterized protein~ MYB44~ complete;original_location=complement(join(1497748..1498312%2C1497089..1497646%2C1496418..1496595%2C1496271..1496325));owner=coffea | |
| 69574 chr11 manual_curation exon 29846341 29846395 . + . Parent=GSCOCT00032257001 | |
| 69575 chr11 manual_curation exon 29846071 29846248 . + . Parent=GSCOCT00032257001 | |
| 69576 chr11 manual_curation exon 29845020 29845577 . + . Parent=GSCOCT00032257001 | |
| 69577 chr11 manual_curation exon 29844354 29844918 . + . Parent=GSCOCT00032257001 | |
| 69578 chr11 manual_curation CDS 29846341 29846395 . + 2 Parent=GSCOCT00032257001 | |
| 69579 chr11 manual_curation CDS 29846071 29846248 . + 1 Parent=GSCOCT00032257001 | |
| 69580 chr11 manual_curation CDS 29845020 29845577 . + 1 Parent=GSCOCT00032257001 | |
| 69581 chr11 manual_curation CDS 29844354 29844918 . + 0 Parent=GSCOCT00032257001 | |
| 69582 chr11 manual_curation gene 29849984 29850817 . - . ID=GSCOCG00032256001;Name=Cc11_g12860 | |
| 69583 chr11 manual_curation mRNA 29849984 29850817 . - . ID=GSCOCT00032256001;Parent=GSCOCG00032256001;Name=Cc11_g12860 | |
| 69584 chr11 manual_curation polypeptide 29850167 29850751 . - . ID=GSCOCP00032256001;Dbxref=GENE3D:G3DSA:1.10.238.10,InterPro:IPR002048,InterPro:IPR011992,InterPro:IPR018247,InterPro:IPR018248,InterPro:IPR018249,PFAM:PF00036,PROFILE:PS50222,PROSITE:PS00018,SMART:SM00054,SwissProt:O22845,SwissProt:Q93Z27,SwissProt:Q9MBG5,TAIR:AT2G43290.1,TAIR:AT3G29000.1,TAIR:AT5G39670.1,TrEMBL:A5AJU7,TrEMBL:B9IJZ4,TrEMBL:F6HPQ4;Derives_from=GSCOCT00032256001;Name=Cc11_g12860;Ontology_term=CC_evidence_code:ISS,GO:0005509,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:CML45,CC_gene:CML30,CC_gene:CML5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032256001~ Putative uncharacterized protein~ CML45~ complete;original_location=1491915..1492499;owner=coffea | |
| 69585 chr11 manual_curation exon 29849984 29850817 . - . Parent=GSCOCT00032256001 | |
| 69586 chr11 manual_curation CDS 29850167 29850751 . - 0 Parent=GSCOCT00032256001 | |
| 69587 chr11 manual_curation gene 29855263 29858890 . - . ID=GSCOCG00032255001;Name=Cc11_g12870 | |
| 69588 chr11 manual_curation mRNA 29855263 29858890 . - . ID=GSCOCT00032255001;Parent=GSCOCG00032255001;Name=Cc11_g12870 | |
| 69589 chr11 manual_curation polypeptide 29855782 29858689 . - . ID=GSCOCP00032255001;Dbxref=InterPro:IPR003851,PFAM:PF02701,PRODOM:PD007478,PROFILE:PS50884,PROSITE:PS01361,SwissProt:Q8LFV3,SwissProt:Q8W1E3,SwissProt:Q93ZL5,TAIR:AT3G47500.1,TAIR:AT5G39660.1,TAIR:AT5G62430.1,TrEMBL:A5AJU8,TrEMBL:F6H5U5,TrEMBL:F6HPQ5;Derives_from=GSCOCT00032255001;Name=Cc11_g12870;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0008270,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative Dof zinc finger protein DOF5.2,CC_functional_completeness:complete,CC_gene:DOF5.2,CC_gene:DOF3.3,CC_gene:DOF5.5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032255001~ Putative Dof zinc finger protein DOF5.2~ DOF5.2~ complete;original_location=join(1483977..1484123%2C1485589..1486358%2C1486413..1486884);owner=coffea | |
| 69590 chr11 manual_curation exon 29858543 29858890 . - . Parent=GSCOCT00032255001 | |
| 69591 chr11 manual_curation exon 29856308 29857077 . - . Parent=GSCOCT00032255001 | |
| 69592 chr11 manual_curation exon 29855263 29856253 . - . Parent=GSCOCT00032255001 | |
| 69593 chr11 manual_curation CDS 29858543 29858689 . - 0 Parent=GSCOCT00032255001 | |
| 69594 chr11 manual_curation CDS 29856308 29857077 . - 0 Parent=GSCOCT00032255001 | |
| 69595 chr11 manual_curation CDS 29855782 29856253 . - 2 Parent=GSCOCT00032255001 | |
| 69596 chr11 manual_curation gene 29865969 29866763 . + . ID=GSCOCG00032254001;Name=Cc11_g12880 | |
| 69597 chr11 manual_curation mRNA 29865969 29866763 . + . ID=GSCOCT00032254001;Parent=GSCOCG00032254001;Name=Cc11_g12880 | |
| 69598 chr11 manual_curation polypeptide 29866024 29866492 . + . ID=GSCOCP00032254001;Derives_from=GSCOCT00032254001;Name=Cc11_g12880;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032254001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(1476561..1476642%2C1476393..1476451%2C1476174..1476278));owner=coffea | |
| 69599 chr11 manual_curation exon 29866388 29866763 . + . Parent=GSCOCT00032254001 | |
| 69600 chr11 manual_curation exon 29866215 29866273 . + . Parent=GSCOCT00032254001 | |
| 69601 chr11 manual_curation exon 29865969 29866105 . + . Parent=GSCOCT00032254001 | |
| 69602 chr11 manual_curation CDS 29866388 29866492 . + 0 Parent=GSCOCT00032254001 | |
| 69603 chr11 manual_curation CDS 29866215 29866273 . + 1 Parent=GSCOCT00032254001 | |
| 69604 chr11 manual_curation CDS 29866024 29866105 . + 0 Parent=GSCOCT00032254001 | |
| 69605 chr11 manual_curation gene 29874903 29876707 . + . ID=GSCOCG00032253001;Name=Cc11_g12890 | |
| 69606 chr11 manual_curation mRNA 29874903 29876707 . + . ID=GSCOCT00032253001;Parent=GSCOCG00032253001;Name=Cc11_g12890 | |
| 69607 chr11 manual_curation polypeptide 29875029 29876447 . + . ID=GSCOCP00032253001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR006447,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR014778,PFAM:PF00249,SUPERFAMILY:SSF46689,SwissProt:Q9SAK5,TAIR:AT1G69580.2,TAIR:AT3G04030.3,TAIR:AT5G18240.1,TIGRFAMs:TIGR01557,TrEMBL:B9HXZ5,TrEMBL:F6HPQ8,TrEMBL:I1JE55;Derives_from=GSCOCT00032253001;Name=Cc11_g12890;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative Homeodomain-like superfamily protein,CC_functional_completeness:complete,CC_gene:APL;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032253001~ Putative Homeodomain-like superfamily protein~ APL~ complete;original_location=complement(join(1467499..1467637%2C1467379..1467404%2C1467181..1467238%2C1467027..1467096%2C1466863..1466932%2C1466219..1466761));owner=coffea | |
| 69608 chr11 manual_curation exon 29875905 29876707 . + . Parent=GSCOCT00032253001 | |
| 69609 chr11 manual_curation exon 29875734 29875803 . + . Parent=GSCOCT00032253001 | |
| 69610 chr11 manual_curation exon 29875570 29875639 . + . Parent=GSCOCT00032253001 | |
| 69611 chr11 manual_curation exon 29875428 29875485 . + . Parent=GSCOCT00032253001 | |
| 69612 chr11 manual_curation exon 29875262 29875287 . + . Parent=GSCOCT00032253001 | |
| 69613 chr11 manual_curation exon 29874903 29875167 . + . Parent=GSCOCT00032253001 | |
| 69614 chr11 manual_curation CDS 29875905 29876447 . + 0 Parent=GSCOCT00032253001 | |
| 69615 chr11 manual_curation CDS 29875734 29875803 . + 2 Parent=GSCOCT00032253001 | |
| 69616 chr11 manual_curation CDS 29875570 29875639 . + 1 Parent=GSCOCT00032253001 | |
| 69617 chr11 manual_curation CDS 29875428 29875485 . + 0 Parent=GSCOCT00032253001 | |
| 69618 chr11 manual_curation CDS 29875262 29875287 . + 1 Parent=GSCOCT00032253001 | |
| 69619 chr11 manual_curation CDS 29875029 29875167 . + 0 Parent=GSCOCT00032253001 | |
| 69620 chr11 manual_curation gene 29879500 29880352 . - . ID=GSCOCG00032252001;Name=Cc11_g12900 | |
| 69621 chr11 manual_curation mRNA 29879500 29880352 . - . ID=GSCOCT00032252001;Parent=GSCOCG00032252001;Name=Cc11_g12900 | |
| 69622 chr11 manual_curation polypeptide 29879654 29880352 . - . ID=GSCOCP00032252001;Dbxref=InterPro:IPR001841,InterPro:IPR018957,PFAM:PF00097,PROFILE:PS50089,SMART:SM00184,SwissProt:P0CH30,SwissProt:Q8LPN7,SwissProt:Q8RXD3,TAIR:AT1G14200.1,TAIR:AT1G26800.1,TAIR:AT5G56340.1,TrEMBL:A9PB64,TrEMBL:A9PIZ7,TrEMBL:B9HI76;Derives_from=GSCOCT00032252001;Name=Cc11_g12900;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative RING/U-box superfamily protein,CC_functional_completeness:complete,CC_gene:RING1,CC_gene:At3g19950,CC_gene:AIP2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032252001~ Putative RING/U-box superfamily protein~ RING1~ complete;original_location=1462314..1463012;owner=coffea | |
| 69623 chr11 manual_curation exon 29879500 29880352 . - . Parent=GSCOCT00032252001 | |
| 69624 chr11 manual_curation CDS 29879654 29880352 . - 0 Parent=GSCOCT00032252001 | |
| 69625 chr11 manual_curation gene 29887029 29889229 . + . ID=GSCOCG00032251001;Name=Cc11_g12910 | |
| 69626 chr11 manual_curation mRNA 29887029 29889229 . + . ID=GSCOCT00032251001;Parent=GSCOCG00032251001;Name=Cc11_g12910 | |
| 69627 chr11 manual_curation polypeptide 29887029 29889229 . + . ID=GSCOCP00032251001;Dbxref=TAIR:AT5G45480.1,TAIR:AT5G45530.1,TAIR:AT5G45540.1,TrEMBL:A5ACM2,TrEMBL:F6H2E9,TrEMBL:F6H2F0;Derives_from=GSCOCT00032251001;Name=Cc11_g12910;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of unknown function (DUF594),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032251001~ Putative Protein of unknown function (DUF594)~ unknown_gene~ complete;original_location=complement(join(1455500..1455637%2C1454901..1455441%2C1454732..1454818%2C1453726..1454686%2C1453437..1453632));owner=coffea | |
| 69628 chr11 manual_curation exon 29889034 29889229 . + . Parent=GSCOCT00032251001 | |
| 69629 chr11 manual_curation exon 29887980 29888940 . + . Parent=GSCOCT00032251001 | |
| 69630 chr11 manual_curation exon 29887848 29887934 . + . Parent=GSCOCT00032251001 | |
| 69631 chr11 manual_curation exon 29887225 29887765 . + . Parent=GSCOCT00032251001 | |
| 69632 chr11 manual_curation exon 29887029 29887166 . + . Parent=GSCOCT00032251001 | |
| 69633 chr11 manual_curation CDS 29889034 29889229 . + 2 Parent=GSCOCT00032251001 | |
| 69634 chr11 manual_curation CDS 29887980 29888940 . + 1 Parent=GSCOCT00032251001 | |
| 69635 chr11 manual_curation CDS 29887848 29887934 . + 1 Parent=GSCOCT00032251001 | |
| 69636 chr11 manual_curation CDS 29887225 29887765 . + 0 Parent=GSCOCT00032251001 | |
| 69637 chr11 manual_curation CDS 29887029 29887166 . + 0 Parent=GSCOCT00032251001 | |
| 69638 chr11 manual_curation gene 29899737 29905996 . - . ID=GSCOCG00032250001;Name=Cc11_g12920 | |
| 69639 chr11 manual_curation mRNA 29899737 29905996 . - . ID=GSCOCT00032250001;Parent=GSCOCG00032250001;Name=Cc11_g12920 | |
| 69640 chr11 manual_curation polypeptide 29900114 29904461 . - . ID=GSCOCP00032250001;Dbxref=GENE3D:G3DSA:2.60.120.200,InterPro:IPR001079,InterPro:IPR002659,InterPro:IPR008985,InterPro:IPR013320,PANTHER:PTHR11214,PFAM:PF00337,PFAM:PF01762,PROFILE:PS51304,SMART:SM00276,SUPERFAMILY:SSF49899,SwissProt:Q8L7F9,SwissProt:Q8RX55,SwissProt:Q9ASW1,TAIR:AT1G26810.1,TAIR:AT1G74800.1,TAIR:AT3G06440.1,TrEMBL:B9HY00,TrEMBL:D7TN76,TrEMBL:G7KFC0;Derives_from=GSCOCT00032250001;Name=Cc11_g12920;Ontology_term=CC_evidence_code:ISS,GO:0005529,GO:0006486,GO:0008378,GO:0016020,CC_EC_number:2.4.1.134,PRODUCT:Beta-1%2C3-galactosyltransferase 15,CC_functional_completeness:complete,CC_gene:B3GALT15,CC_gene:B3GALT16,CC_gene:B3GALT18;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032250001~ Beta-1%2C3-galactosyltransferase 15~ B3GALT15~ complete;original_location=join(1438205..1438967%2C1439798..1440033%2C1440124..1440405%2C1440920..1441048%2C1441118..1441297%2C1442088..1442195%2C1442343..1442552);owner=coffea | |
| 69641 chr11 manual_curation exon 29905574 29905996 . - . Parent=GSCOCT00032250001 | |
| 69642 chr11 manual_curation exon 29903699 29904605 . - . Parent=GSCOCT00032250001 | |
| 69643 chr11 manual_curation exon 29902633 29902868 . - . Parent=GSCOCT00032250001 | |
| 69644 chr11 manual_curation exon 29902261 29902542 . - . Parent=GSCOCT00032250001 | |
| 69645 chr11 manual_curation exon 29901618 29901746 . - . Parent=GSCOCT00032250001 | |
| 69646 chr11 manual_curation exon 29901369 29901548 . - . Parent=GSCOCT00032250001 | |
| 69647 chr11 manual_curation exon 29900471 29900578 . - . Parent=GSCOCT00032250001 | |
| 69648 chr11 manual_curation exon 29899737 29900323 . - . Parent=GSCOCT00032250001 | |
| 69649 chr11 manual_curation CDS 29903699 29904461 . - 0 Parent=GSCOCT00032250001 | |
| 69650 chr11 manual_curation CDS 29902633 29902868 . - 1 Parent=GSCOCT00032250001 | |
| 69651 chr11 manual_curation CDS 29902261 29902542 . - 0 Parent=GSCOCT00032250001 | |
| 69652 chr11 manual_curation CDS 29901618 29901746 . - 0 Parent=GSCOCT00032250001 | |
| 69653 chr11 manual_curation CDS 29901369 29901548 . - 0 Parent=GSCOCT00032250001 | |
| 69654 chr11 manual_curation CDS 29900471 29900578 . - 0 Parent=GSCOCT00032250001 | |
| 69655 chr11 manual_curation CDS 29900114 29900323 . - 0 Parent=GSCOCT00032250001 | |
| 69656 chr11 manual_curation gene 29909581 29914438 . - . ID=GSCOCG00032249001;Name=Cc11_g12930 | |
| 69657 chr11 manual_curation mRNA 29909581 29914438 . - . ID=GSCOCT00032249001;Parent=GSCOCG00032249001;Name=Cc11_g12930 | |
| 69658 chr11 manual_curation polypeptide 29909641 29913530 . - . ID=GSCOCP00032249001;Dbxref=GENE3D:G3DSA:3.90.730.10,InterPro:IPR001568,InterPro:IPR018188,PANTHER:PTHR11240,PFAM:PF00445,PROSITE:PS00530,PROSITE:PS00531,SUPERFAMILY:SSF55895,SwissProt:P42813,SwissProt:P80022,SwissProt:P80196,TAIR:AT1G14220.1,TAIR:AT1G26820.1,TAIR:AT2G02990.1,TrEMBL:I1J5R3,TrEMBL:Q40382,TrEMBL:Q7M234;Derives_from=GSCOCT00032249001;Name=Cc11_g12930;Ontology_term=CC_evidence_code:ISS,GO:0003723,GO:0033897,CC_EC_number:3.1.27.1,PRODUCT:Extracellular ribonuclease LE,CC_functional_completeness:complete,CC_gene:RNALX,CC_gene:RNS1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032249001~ Extracellular ribonuclease LE~ RNALX~ complete;original_location=join(1429136..1429195%2C1430004..1430075%2C1430538..1430693%2C1431997..1432195%2C1432802..1433025);owner=coffea | |
| 69659 chr11 manual_curation exon 29913471 29914438 . - . Parent=GSCOCT00032249001 | |
| 69660 chr11 manual_curation exon 29912591 29912662 . - . Parent=GSCOCT00032249001 | |
| 69661 chr11 manual_curation exon 29911973 29912128 . - . Parent=GSCOCT00032249001 | |
| 69662 chr11 manual_curation exon 29910471 29910669 . - . Parent=GSCOCT00032249001 | |
| 69663 chr11 manual_curation exon 29909581 29909864 . - . Parent=GSCOCT00032249001 | |
| 69664 chr11 manual_curation CDS 29913471 29913530 . - 0 Parent=GSCOCT00032249001 | |
| 69665 chr11 manual_curation CDS 29912591 29912662 . - 0 Parent=GSCOCT00032249001 | |
| 69666 chr11 manual_curation CDS 29911973 29912128 . - 0 Parent=GSCOCT00032249001 | |
| 69667 chr11 manual_curation CDS 29910471 29910669 . - 0 Parent=GSCOCT00032249001 | |
| 69668 chr11 manual_curation CDS 29909641 29909864 . - 1 Parent=GSCOCT00032249001 | |
| 69669 chr11 manual_curation gene 29915049 29917529 . - . ID=GSCOCG00032248001;Name=Cc11_g12940 | |
| 69670 chr11 manual_curation mRNA 29915049 29917529 . - . ID=GSCOCT00032248001;Parent=GSCOCG00032248001;Name=Cc11_g12940 | |
| 69671 chr11 manual_curation polypeptide 29915417 29917393 . - . ID=GSCOCP00032248001;Dbxref=GENE3D:G3DSA:3.90.730.10,InterPro:IPR001568,InterPro:IPR018188,PANTHER:PTHR11240,PFAM:PF00445,PROSITE:PS00530,PROSITE:PS00531,SUPERFAMILY:SSF55895,SwissProt:P42813,SwissProt:P80022,SwissProt:P80196,TAIR:AT1G14220.1,TAIR:AT1G26820.1,TAIR:AT2G02990.1,TrEMBL:Q9MB71,TrEMBL:Q9SSV1,TrEMBL:Q9T0M5;Derives_from=GSCOCT00032248001;Name=Cc11_g12940;Ontology_term=CC_evidence_code:ISS,GO:0003723,GO:0033897,CC_EC_number:3.1.27.1,PRODUCT:Intracellular ribonuclease LX,CC_functional_completeness:complete,CC_gene:RNALX,CC_gene:RNS1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032248001~ Intracellular ribonuclease LX~ RNALX~ complete;original_location=join(1425273..1425377%2C1425504..1425659%2C1426495..1426687%2C1427008..1427249);owner=coffea | |
| 69672 chr11 manual_curation exon 29917289 29917529 . - . Parent=GSCOCT00032248001 | |
| 69673 chr11 manual_curation exon 29917007 29917162 . - . Parent=GSCOCT00032248001 | |
| 69674 chr11 manual_curation exon 29915979 29916171 . - . Parent=GSCOCT00032248001 | |
| 69675 chr11 manual_curation exon 29915049 29915658 . - . Parent=GSCOCT00032248001 | |
| 69676 chr11 manual_curation CDS 29917289 29917393 . - 0 Parent=GSCOCT00032248001 | |
| 69677 chr11 manual_curation CDS 29917007 29917162 . - 0 Parent=GSCOCT00032248001 | |
| 69678 chr11 manual_curation CDS 29915979 29916171 . - 0 Parent=GSCOCT00032248001 | |
| 69679 chr11 manual_curation CDS 29915417 29915658 . - 1 Parent=GSCOCT00032248001 | |
| 69680 chr11 manual_curation gene 29919207 29920316 . - . ID=GSCOCG00032247001;Name=Cc11_g12950 | |
| 69681 chr11 manual_curation mRNA 29919207 29920316 . - . ID=GSCOCT00032247001;Parent=GSCOCG00032247001;Name=Cc11_g12950 | |
| 69682 chr11 manual_curation polypeptide 29919207 29920316 . - . ID=GSCOCP00032247001;Dbxref=GENE3D:G3DSA:3.90.730.10,InterPro:IPR001568,InterPro:IPR018188,PANTHER:PTHR11240,PFAM:PF00445,PROSITE:PS00530,PROSITE:PS00531,SUPERFAMILY:SSF55895,SwissProt:P42813,SwissProt:P80022,SwissProt:P80196,TAIR:AT1G14220.1,TAIR:AT1G26820.1,TAIR:AT2G02990.1,TrEMBL:Q40382,TrEMBL:Q7M234,TrEMBL:Q7XZV5;Derives_from=GSCOCT00032247001;Name=Cc11_g12950;Ontology_term=CC_evidence_code:ISS,GO:0003723,GO:0033897,CC_EC_number:3.1.27.1,PRODUCT:Extracellular ribonuclease LE,CC_functional_completeness:complete,CC_gene:RNS1,CC_gene:RNALX;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032247001~ Extracellular ribonuclease LE~ RNS1~ complete;original_location=join(1422350..1422457%2C1422548..1422703%2C1422925..1423123%2C1423236..1423459);owner=coffea | |
| 69683 chr11 manual_curation exon 29920209 29920316 . - . Parent=GSCOCT00032247001 | |
| 69684 chr11 manual_curation exon 29919963 29920118 . - . Parent=GSCOCT00032247001 | |
| 69685 chr11 manual_curation exon 29919543 29919741 . - . Parent=GSCOCT00032247001 | |
| 69686 chr11 manual_curation exon 29919207 29919430 . - . Parent=GSCOCT00032247001 | |
| 69687 chr11 manual_curation CDS 29920209 29920316 . - 0 Parent=GSCOCT00032247001 | |
| 69688 chr11 manual_curation CDS 29919963 29920118 . - 0 Parent=GSCOCT00032247001 | |
| 69689 chr11 manual_curation CDS 29919543 29919741 . - 0 Parent=GSCOCT00032247001 | |
| 69690 chr11 manual_curation CDS 29919207 29919430 . - 1 Parent=GSCOCT00032247001 | |
| 69691 chr11 manual_curation gene 29922440 29923621 . - . ID=GSCOCG00032246001;Name=Cc11_g12960 | |
| 69692 chr11 manual_curation mRNA 29922440 29923621 . - . ID=GSCOCT00032246001;Parent=GSCOCG00032246001;Name=Cc11_g12960 | |
| 69693 chr11 manual_curation polypeptide 29922440 29923621 . - . ID=GSCOCP00032246001;Dbxref=GENE3D:G3DSA:3.90.730.10,InterPro:IPR001568,InterPro:IPR018188,PANTHER:PTHR11240,PFAM:PF00445,PROSITE:PS00531,SUPERFAMILY:SSF55895,SwissProt:P42813,SwissProt:P42815,SwissProt:P80022,TAIR:AT1G14220.1,TAIR:AT1G26820.1,TAIR:AT2G02990.1,TrEMBL:B9S8X4,TrEMBL:Q9FQL6,TrEMBL:Q9MB71;Derives_from=GSCOCT00032246001;Name=Cc11_g12960;Ontology_term=CC_evidence_code:ISS,GO:0003723,GO:0033897,CC_EC_number:3.1.27.1,PRODUCT:Putative Extracellular ribonuclease LE,CC_functional_completeness:complete,CC_gene:RNS3,CC_gene:RNS1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032246001~ Putative Extracellular ribonuclease LE~ RNS3~ complete;original_location=join(1419045..1419146%2C1419254..1419406%2C1419722..1419866%2C1419994..1420226);owner=coffea | |
| 69694 chr11 manual_curation exon 29923520 29923621 . - . Parent=GSCOCT00032246001 | |
| 69695 chr11 manual_curation exon 29923260 29923412 . - . Parent=GSCOCT00032246001 | |
| 69696 chr11 manual_curation exon 29922800 29922944 . - . Parent=GSCOCT00032246001 | |
| 69697 chr11 manual_curation exon 29922440 29922672 . - . Parent=GSCOCT00032246001 | |
| 69698 chr11 manual_curation CDS 29923520 29923621 . - 0 Parent=GSCOCT00032246001 | |
| 69699 chr11 manual_curation CDS 29923260 29923412 . - 0 Parent=GSCOCT00032246001 | |
| 69700 chr11 manual_curation CDS 29922800 29922944 . - 0 Parent=GSCOCT00032246001 | |
| 69701 chr11 manual_curation CDS 29922440 29922672 . - 1 Parent=GSCOCT00032246001 | |
| 69702 chr11 manual_curation gene 29924905 29926035 . - . ID=GSCOCG00032245001;Name=Cc11_g12970 | |
| 69703 chr11 manual_curation mRNA 29924905 29926035 . - . ID=GSCOCT00032245001;Parent=GSCOCG00032245001;Name=Cc11_g12970 | |
| 69704 chr11 manual_curation polypeptide 29924905 29926035 . - . ID=GSCOCP00032245001;Dbxref=GENE3D:G3DSA:3.90.730.10,InterPro:IPR001568,InterPro:IPR018188,PANTHER:PTHR11240,PFAM:PF00445,PROSITE:PS00530,PROSITE:PS00531,SUPERFAMILY:SSF55895,SwissProt:P42813,SwissProt:P80022,SwissProt:P80196,TAIR:AT1G14220.1,TAIR:AT1G26820.1,TAIR:AT2G02990.1,TrEMBL:Q40382,TrEMBL:Q7M234,TrEMBL:Q9MB71;Derives_from=GSCOCT00032245001;Name=Cc11_g12970;Ontology_term=CC_evidence_code:ISS,GO:0003723,GO:0033897,CC_EC_number:3.1.27.1,PRODUCT:Extracellular ribonuclease LE,CC_functional_completeness:complete,CC_gene:RNS1,CC_gene:RNALX;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032245001~ Extracellular ribonuclease LE~ RNS1~ complete;original_location=join(1416631..1416732%2C1416846..1417001%2C1417228..1417429%2C1417544..1417761);owner=coffea | |
| 69705 chr11 manual_curation exon 29925934 29926035 . - . Parent=GSCOCT00032245001 | |
| 69706 chr11 manual_curation exon 29925665 29925820 . - . Parent=GSCOCT00032245001 | |
| 69707 chr11 manual_curation exon 29925237 29925438 . - . Parent=GSCOCT00032245001 | |
| 69708 chr11 manual_curation exon 29924905 29925122 . - . Parent=GSCOCT00032245001 | |
| 69709 chr11 manual_curation CDS 29925934 29926035 . - 0 Parent=GSCOCT00032245001 | |
| 69710 chr11 manual_curation CDS 29925665 29925820 . - 0 Parent=GSCOCT00032245001 | |
| 69711 chr11 manual_curation CDS 29925237 29925438 . - 0 Parent=GSCOCT00032245001 | |
| 69712 chr11 manual_curation CDS 29924905 29925122 . - 1 Parent=GSCOCT00032245001 | |
| 69713 chr11 manual_curation gene 29929198 29931239 . - . ID=GSCOCG00032242001;Name=Cc11_g12980 | |
| 69714 chr11 manual_curation mRNA 29929198 29931239 . - . ID=GSCOCT00032242001;Parent=GSCOCG00032242001;Name=Cc11_g12980 | |
| 69715 chr11 manual_curation polypeptide 29929318 29931054 . - . ID=GSCOCP00032242001;Dbxref=InterPro:IPR013057,PFAM:PF01490,SwissProt:P47082,SwissProt:Q6DIV6,SwissProt:Q6PF45,TAIR:AT2G39130.1,TAIR:AT3G28960.1,TAIR:AT5G15240.1,TrEMBL:B9HI70,TrEMBL:B9S8W8,TrEMBL:D7TN79;Derives_from=GSCOCT00032242001;Name=Cc11_g12980;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Vacuolar amino acid transporter 1,CC_functional_completeness:fragment,CC_gene:AVT1,CC_gene:slc32a1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032242001~ Putative Vacuolar amino acid transporter 1~ AVT1~ fragment;original_location=join(1411612..1411720%2C1411850..1412457%2C1412833..1413348);owner=coffea | |
| 69716 chr11 manual_curation exon 29930946 29931239 . - . Parent=GSCOCT00032242001 | |
| 69717 chr11 manual_curation exon 29930209 29930816 . - . Parent=GSCOCT00032242001 | |
| 69718 chr11 manual_curation exon 29929198 29929833 . - . Parent=GSCOCT00032242001 | |
| 69719 chr11 manual_curation CDS 29930946 29931054 . - 0 Parent=GSCOCT00032242001 | |
| 69720 chr11 manual_curation CDS 29930209 29930816 . - 1 Parent=GSCOCT00032242001 | |
| 69721 chr11 manual_curation CDS 29929318 29929833 . - 0 Parent=GSCOCT00032242001 | |
| 69722 chr11 manual_curation gene 29935164 29939091 . + . ID=GSCOCG00032241001;Name=Cc11_g12990 | |
| 69723 chr11 manual_curation mRNA 29935164 29939091 . + . ID=GSCOCT00032241001;Parent=GSCOCG00032241001;Name=Cc11_g12990 | |
| 69724 chr11 manual_curation polypeptide 29935504 29938974 . + . ID=GSCOCP00032241001;Dbxref=InterPro:IPR000407,PANTHER:PTHR11782,PFAM:PF01150,SwissProt:O18956,SwissProt:P55772,SwissProt:P97687,TAIR:AT1G14230.1,TAIR:AT1G14250.1,TAIR:AT2G02970.1,TrEMBL:B9HI69,TrEMBL:B9S8W7,TrEMBL:F6HPR0;Derives_from=GSCOCT00032241001;Name=Cc11_g12990;Ontology_term=CC_evidence_code:ISS,GO:0016787,CC_EC_number:3.6.1.5,PRODUCT:Putative Ectonucleoside triphosphate diphosphohydrolase 1,CC_functional_completeness:complete,CC_gene:Entpd1,CC_gene:ENTPD1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032241001~ Putative Ectonucleoside triphosphate diphosphohydrolase 1~ Entpd1~ complete;original_location=complement(join(1406601..1407162%2C1405990..1406102%2C1405543..1405650%2C1405290..1405344%2C1404826..1405011%2C1404622..1404719%2C1404283..1404479%2C1403692..1403968));owner=coffea | |
| 69725 chr11 manual_curation exon 29938698 29939091 . + . Parent=GSCOCT00032241001 | |
| 69726 chr11 manual_curation exon 29938187 29938383 . + . Parent=GSCOCT00032241001 | |
| 69727 chr11 manual_curation exon 29937947 29938044 . + . Parent=GSCOCT00032241001 | |
| 69728 chr11 manual_curation exon 29937655 29937840 . + . Parent=GSCOCT00032241001 | |
| 69729 chr11 manual_curation exon 29937322 29937376 . + . Parent=GSCOCT00032241001 | |
| 69730 chr11 manual_curation exon 29937016 29937123 . + . Parent=GSCOCT00032241001 | |
| 69731 chr11 manual_curation exon 29936564 29936676 . + . Parent=GSCOCT00032241001 | |
| 69732 chr11 manual_curation exon 29935164 29936065 . + . Parent=GSCOCT00032241001 | |
| 69733 chr11 manual_curation CDS 29938698 29938974 . + 2 Parent=GSCOCT00032241001 | |
| 69734 chr11 manual_curation CDS 29938187 29938383 . + 0 Parent=GSCOCT00032241001 | |
| 69735 chr11 manual_curation CDS 29937947 29938044 . + 1 Parent=GSCOCT00032241001 | |
| 69736 chr11 manual_curation CDS 29937655 29937840 . + 1 Parent=GSCOCT00032241001 | |
| 69737 chr11 manual_curation CDS 29937322 29937376 . + 0 Parent=GSCOCT00032241001 | |
| 69738 chr11 manual_curation CDS 29937016 29937123 . + 0 Parent=GSCOCT00032241001 | |
| 69739 chr11 manual_curation CDS 29936564 29936676 . + 1 Parent=GSCOCT00032241001 | |
| 69740 chr11 manual_curation CDS 29935504 29936065 . + 0 Parent=GSCOCT00032241001 | |
| 69741 chr11 manual_curation gene 29941424 29945920 . + . ID=GSCOCG00032239001;Name=Cc11_g13000 | |
| 69742 chr11 manual_curation mRNA 29941424 29945920 . + . ID=GSCOCT00032239001;Parent=GSCOCG00032239001;Name=Cc11_g13000 | |
| 69743 chr11 manual_curation polypeptide 29941994 29945681 . + . ID=GSCOCP00032239001;Dbxref=InterPro:IPR011016,InterPro:IPR018957,InterPro:IPR022143,PFAM:PF00097,PFAM:PF12428,PROFILE:PS51292,SMART:SM00744,TAIR:AT1G14260.1,TAIR:AT3G47550.3,TAIR:AT5G62460.1,TrEMBL:B9HY07,TrEMBL:B9S8W6,TrEMBL:I1KMH5;Derives_from=GSCOCT00032239001;Name=Cc11_g13000;Ontology_term=CC_evidence_code:ISS,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:RING/FYVE/PHD zinc finger superfamily protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032239001~ RING/FYVE/PHD zinc finger superfamily protein~ unknown_gene~ modules;original_location=complement(join(1400397..1400672%2C1399437..1399508%2C1398547..1398608%2C1398218..1398374%2C1397534..1397614%2C1397343..1397432%2C1396985..1397125));owner=coffea | |
| 69744 chr11 manual_curation exon 29941424 29941678 . + . Parent=GSCOCT00032239001 | |
| 69745 chr11 manual_curation exon 29945541 29945920 . + . Parent=GSCOCT00032239001 | |
| 69746 chr11 manual_curation exon 29945234 29945323 . + . Parent=GSCOCT00032239001 | |
| 69747 chr11 manual_curation exon 29945052 29945132 . + . Parent=GSCOCT00032239001 | |
| 69748 chr11 manual_curation exon 29944292 29944448 . + . Parent=GSCOCT00032239001 | |
| 69749 chr11 manual_curation exon 29944058 29944119 . + . Parent=GSCOCT00032239001 | |
| 69750 chr11 manual_curation exon 29943158 29943229 . + . Parent=GSCOCT00032239001 | |
| 69751 chr11 manual_curation exon 29941945 29942269 . + . Parent=GSCOCT00032239001 | |
| 69752 chr11 manual_curation CDS 29945541 29945681 . + 0 Parent=GSCOCT00032239001 | |
| 69753 chr11 manual_curation CDS 29945234 29945323 . + 0 Parent=GSCOCT00032239001 | |
| 69754 chr11 manual_curation CDS 29945052 29945132 . + 0 Parent=GSCOCT00032239001 | |
| 69755 chr11 manual_curation CDS 29944292 29944448 . + 2 Parent=GSCOCT00032239001 | |
| 69756 chr11 manual_curation CDS 29944058 29944119 . + 0 Parent=GSCOCT00032239001 | |
| 69757 chr11 manual_curation CDS 29943158 29943229 . + 0 Parent=GSCOCT00032239001 | |
| 69758 chr11 manual_curation CDS 29941994 29942269 . + 0 Parent=GSCOCT00032239001 | |
| 69759 chr11 manual_curation gene 29946040 29946339 . - . ID=GSCOCG00032238001;Name=Cc11_g13010 | |
| 69760 chr11 manual_curation mRNA 29946040 29946339 . - . ID=GSCOCT00032238001;Parent=GSCOCG00032238001;Name=Cc11_g13010 | |
| 69761 chr11 manual_curation polypeptide 29946040 29946339 . - . ID=GSCOCP00032238001;Derives_from=GSCOCT00032238001;Name=Cc11_g13010;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032238001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1396327..1396626;owner=coffea | |
| 69762 chr11 manual_curation exon 29946040 29946339 . - . Parent=GSCOCT00032238001 | |
| 69763 chr11 manual_curation CDS 29946040 29946339 . - 0 Parent=GSCOCT00032238001 | |
| 69764 chr11 manual_curation gene 29971403 29975601 . + . ID=GSCOCG00032235001;Name=Cc11_g13020 | |
| 69765 chr11 manual_curation mRNA 29971403 29975601 . + . ID=GSCOCT00032235001;Parent=GSCOCG00032235001;Name=Cc11_g13020 | |
| 69766 chr11 manual_curation polypeptide 29971765 29975312 . + . ID=GSCOCP00032235001;Dbxref=InterPro:IPR008195,InterPro:IPR012870,PANTHER:PTHR10759,PFAM:PF07891,TAIR:AT1G69610.1,TAIR:AT3G20260.1,TAIR:AT5G39785.2,TrEMBL:B9S8W2,TrEMBL:B9T740,TrEMBL:F6HPR6;Derives_from=GSCOCT00032235001;Name=Cc11_g13020;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032235001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=complement(join(1370732..1370901%2C1369237..1370630%2C1368024..1368437%2C1367707..1367936%2C1367354..1367605));owner=coffea | |
| 69767 chr11 manual_curation exon 29975061 29975601 . + . Parent=GSCOCT00032235001 | |
| 69768 chr11 manual_curation exon 29974730 29974959 . + . Parent=GSCOCT00032235001 | |
| 69769 chr11 manual_curation exon 29974229 29974642 . + . Parent=GSCOCT00032235001 | |
| 69770 chr11 manual_curation exon 29972036 29973429 . + . Parent=GSCOCT00032235001 | |
| 69771 chr11 manual_curation exon 29971403 29971934 . + . Parent=GSCOCT00032235001 | |
| 69772 chr11 manual_curation CDS 29975061 29975312 . + 0 Parent=GSCOCT00032235001 | |
| 69773 chr11 manual_curation CDS 29974730 29974959 . + 1 Parent=GSCOCT00032235001 | |
| 69774 chr11 manual_curation CDS 29974229 29974642 . + 1 Parent=GSCOCT00032235001 | |
| 69775 chr11 manual_curation CDS 29972036 29973429 . + 2 Parent=GSCOCT00032235001 | |
| 69776 chr11 manual_curation CDS 29971765 29971934 . + 0 Parent=GSCOCT00032235001 | |
| 69777 chr11 manual_curation gene 29981873 29984558 . + . ID=GSCOCG00032233001;Name=Cc11_g13030 | |
| 69778 chr11 manual_curation mRNA 29981873 29984558 . + . ID=GSCOCT00032233001;Parent=GSCOCG00032233001;Name=Cc11_g13030 | |
| 69779 chr11 manual_curation polypeptide 29981987 29983818 . + . ID=GSCOCP00032233001;Dbxref=InterPro:IPR008195,InterPro:IPR018065,PANTHER:PTHR10759,PFAM:PF01199,PRINTS:PR01250,PROSITE:PS01145,SwissProt:P40590,SwissProt:P41098,SwissProt:Q42351,TAIR:AT1G26880.1,TAIR:AT1G69620.1,TAIR:AT3G28900.1,TrEMBL:A9P8R1,TrEMBL:A9PB27,TrEMBL:A9PDF8;Derives_from=GSCOCT00032233001;Name=Cc11_g13030;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:60S ribosomal protein L34,CC_functional_completeness:complete,CC_gene:RPL34,CC_gene:RPL34A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032233001~ 60S ribosomal protein L34~ RPL34~ complete;original_location=complement(join(1360601..1360679%2C1360356..1360435%2C1359033..1359142%2C1358848..1358941));owner=coffea | |
| 69780 chr11 manual_curation exon 29983725 29984558 . + . Parent=GSCOCT00032233001 | |
| 69781 chr11 manual_curation exon 29983524 29983633 . + . Parent=GSCOCT00032233001 | |
| 69782 chr11 manual_curation exon 29982231 29982310 . + . Parent=GSCOCT00032233001 | |
| 69783 chr11 manual_curation exon 29981873 29982065 . + . Parent=GSCOCT00032233001 | |
| 69784 chr11 manual_curation CDS 29983725 29983818 . + 2 Parent=GSCOCT00032233001 | |
| 69785 chr11 manual_curation CDS 29983524 29983633 . + 0 Parent=GSCOCT00032233001 | |
| 69786 chr11 manual_curation CDS 29982231 29982310 . + 1 Parent=GSCOCT00032233001 | |
| 69787 chr11 manual_curation CDS 29981987 29982065 . + 0 Parent=GSCOCT00032233001 | |
| 69788 chr11 manual_curation gene 29985511 29987111 . - . ID=GSCOCG00032232001;Name=Cc11_g13040 | |
| 69789 chr11 manual_curation mRNA 29985511 29987111 . - . ID=GSCOCT00032232001;Parent=GSCOCG00032232001;Name=Cc11_g13040 | |
| 69790 chr11 manual_curation polypeptide 29985511 29987111 . - . ID=GSCOCP00032232001;Dbxref=InterPro:IPR003441,PFAM:PF02365,PROFILE:PS51005,SUPERFAMILY:SSF101941,SwissProt:Q9FIW5,SwissProt:Q9SK55,SwissProt:Q9ZVH0,TAIR:AT1G26870.1,TAIR:AT2G43000.1,TAIR:AT5G39820.1,TrEMBL:A5C0Y3,TrEMBL:B9IJW7,TrEMBL:F6HPC3;Derives_from=GSCOCT00032232001;Name=Cc11_g13040;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Protein FEZ,CC_functional_completeness:fragment,CC_gene:FEZ,CC_gene:ANAC094,CC_gene:NAC042;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032232001~ Protein FEZ~ FEZ~ fragment;original_location=join(1355555..1355738%2C1356002..1356306%2C1356406..1356924%2C1356961..1357155);owner=coffea | |
| 69791 chr11 manual_curation exon 29986928 29987111 . - . Parent=GSCOCT00032232001 | |
| 69792 chr11 manual_curation exon 29986360 29986664 . - . Parent=GSCOCT00032232001 | |
| 69793 chr11 manual_curation exon 29985742 29986260 . - . Parent=GSCOCT00032232001 | |
| 69794 chr11 manual_curation exon 29985511 29985705 . - . Parent=GSCOCT00032232001 | |
| 69795 chr11 manual_curation CDS 29986928 29987111 . - 0 Parent=GSCOCT00032232001 | |
| 69796 chr11 manual_curation CDS 29986360 29986664 . - 1 Parent=GSCOCT00032232001 | |
| 69797 chr11 manual_curation CDS 29985742 29986260 . - 0 Parent=GSCOCT00032232001 | |
| 69798 chr11 manual_curation CDS 29985511 29985705 . - 0 Parent=GSCOCT00032232001 | |
| 69799 chr11 manual_curation gene 29991455 29996057 . - . ID=GSCOCG00032231001;Name=Cc11_g13050 | |
| 69800 chr11 manual_curation mRNA 29991455 29996057 . - . ID=GSCOCT00032231001;Parent=GSCOCG00032231001;Name=Cc11_g13050 | |
| 69801 chr11 manual_curation polypeptide 29991706 29995928 . - . ID=GSCOCP00032231001;Dbxref=InterPro:IPR003675,PFAM:PF02517,TAIR:AT1G14270.1,TAIR:AT2G20725.1,TAIR:AT5G60750.1,TrEMBL:A4UV47,TrEMBL:D7TN91,TrEMBL:I1KXT8;Derives_from=GSCOCT00032231001;Name=Cc11_g13050;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:CAAX amino terminal protease family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032231001~ CAAX amino terminal protease family protein~ unknown_gene~ complete;original_location=join(1346738..1346998%2C1347543..1347634%2C1347947..1348054%2C1348144..1348226%2C1348530..1348663%2C1349329..1349378%2C1349520..1349612%2C1349779..1349870%2C1350368..1350474%2C1350919..1350960);owner=coffea | |
| 69802 chr11 manual_curation exon 29995668 29996057 . - . Parent=GSCOCT00032231001 | |
| 69803 chr11 manual_curation exon 29995032 29995123 . - . Parent=GSCOCT00032231001 | |
| 69804 chr11 manual_curation exon 29994612 29994719 . - . Parent=GSCOCT00032231001 | |
| 69805 chr11 manual_curation exon 29994440 29994522 . - . Parent=GSCOCT00032231001 | |
| 69806 chr11 manual_curation exon 29994003 29994136 . - . Parent=GSCOCT00032231001 | |
| 69807 chr11 manual_curation exon 29993288 29993337 . - . Parent=GSCOCT00032231001 | |
| 69808 chr11 manual_curation exon 29993054 29993146 . - . Parent=GSCOCT00032231001 | |
| 69809 chr11 manual_curation exon 29992796 29992887 . - . Parent=GSCOCT00032231001 | |
| 69810 chr11 manual_curation exon 29992192 29992298 . - . Parent=GSCOCT00032231001 | |
| 69811 chr11 manual_curation exon 29991455 29991747 . - . Parent=GSCOCT00032231001 | |
| 69812 chr11 manual_curation CDS 29995668 29995928 . - 0 Parent=GSCOCT00032231001 | |
| 69813 chr11 manual_curation CDS 29995032 29995123 . - 0 Parent=GSCOCT00032231001 | |
| 69814 chr11 manual_curation CDS 29994612 29994719 . - 2 Parent=GSCOCT00032231001 | |
| 69815 chr11 manual_curation CDS 29994440 29994522 . - 2 Parent=GSCOCT00032231001 | |
| 69816 chr11 manual_curation CDS 29994003 29994136 . - 1 Parent=GSCOCT00032231001 | |
| 69817 chr11 manual_curation CDS 29993288 29993337 . - 0 Parent=GSCOCT00032231001 | |
| 69818 chr11 manual_curation CDS 29993054 29993146 . - 2 Parent=GSCOCT00032231001 | |
| 69819 chr11 manual_curation CDS 29992796 29992887 . - 2 Parent=GSCOCT00032231001 | |
| 69820 chr11 manual_curation CDS 29992192 29992298 . - 1 Parent=GSCOCT00032231001 | |
| 69821 chr11 manual_curation CDS 29991706 29991747 . - 0 Parent=GSCOCT00032231001 | |
| 69822 chr11 manual_curation gene 30008045 30012240 . - . ID=GSCOCG00032229001;Name=Cc11_g13060 | |
| 69823 chr11 manual_curation mRNA 30008045 30012240 . - . ID=GSCOCT00032229001;Parent=GSCOCG00032229001;Name=Cc11_g13060 | |
| 69824 chr11 manual_curation polypeptide 30008609 30010855 . - . ID=GSCOCP00032229001;Dbxref=InterPro:IPR003656,InterPro:IPR008906,PFAM:PF05699,PROFILE:PS50808,SMART:SM00614,SwissProt:O96006,SwissProt:P03010,SwissProt:P08770,TAIR:AT1G18560.1,TAIR:AT3G42170.1,TrEMBL:A5AJ27,TrEMBL:C5XTW1,TrEMBL:Q0JNH7;Derives_from=GSCOCT00032229001;Name=Cc11_g13060;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0046983,CC_EC_number:missing_EC_number,PRODUCT:Putative AC transposase,CC_functional_completeness:fragment,CC_gene:ZBED1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032229001~ Putative AC transposase~ ZBED1~ fragment;original_location=1331811..1334057;owner=coffea | |
| 69825 chr11 manual_curation exon 30008045 30012240 . - . Parent=GSCOCT00032229001 | |
| 69826 chr11 manual_curation CDS 30008609 30010855 . - 0 Parent=GSCOCT00032229001 | |
| 69827 chr11 manual_curation gene 30013151 30018994 . + . ID=GSCOCG00032228001;Name=Cc11_g13070 | |
| 69828 chr11 manual_curation mRNA 30013151 30018994 . + . ID=GSCOCT00032228001;Parent=GSCOCG00032228001;Name=Cc11_g13070 | |
| 69829 chr11 manual_curation polypeptide 30014511 30018575 . + . ID=GSCOCP00032228001;Dbxref=InterPro:IPR004159,PFAM:PF03141,SwissProt:B9DFI7,SwissProt:Q94EJ6,SwissProt:Q9SZX8,TAIR:AT1G26850.1,TAIR:AT4G10440.1,TAIR:AT4G18030.1,TrEMBL:A4UV20,TrEMBL:G7LA51,TrEMBL:I1J5Q3;Derives_from=GSCOCT00032228001;Name=Cc11_g13070;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Probable methyltransferase PMT2,CC_functional_completeness:complete,CC_gene:At1g26850,CC_gene:At4g18030,CC_gene:At4g10440;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032228001~ Probable methyltransferase PMT2~ At1g26850~ complete;original_location=complement(join(1327508..1328155%2C1327160..1327370%2C1326624..1326918%2C1325074..1325457%2C1324886..1324963%2C1324091..1324325));owner=coffea | |
| 69830 chr11 manual_curation exon 30013151 30013536 . + . Parent=GSCOCT00032228001 | |
| 69831 chr11 manual_curation exon 30018341 30018994 . + . Parent=GSCOCT00032228001 | |
| 69832 chr11 manual_curation exon 30017703 30017780 . + . Parent=GSCOCT00032228001 | |
| 69833 chr11 manual_curation exon 30017209 30017592 . + . Parent=GSCOCT00032228001 | |
| 69834 chr11 manual_curation exon 30015748 30016042 . + . Parent=GSCOCT00032228001 | |
| 69835 chr11 manual_curation exon 30015296 30015506 . + . Parent=GSCOCT00032228001 | |
| 69836 chr11 manual_curation exon 30014509 30015158 . + . Parent=GSCOCT00032228001 | |
| 69837 chr11 manual_curation CDS 30018341 30018575 . + 2 Parent=GSCOCT00032228001 | |
| 69838 chr11 manual_curation CDS 30017703 30017780 . + 2 Parent=GSCOCT00032228001 | |
| 69839 chr11 manual_curation CDS 30017209 30017592 . + 2 Parent=GSCOCT00032228001 | |
| 69840 chr11 manual_curation CDS 30015748 30016042 . + 1 Parent=GSCOCT00032228001 | |
| 69841 chr11 manual_curation CDS 30015296 30015506 . + 0 Parent=GSCOCT00032228001 | |
| 69842 chr11 manual_curation CDS 30014511 30015158 . + 0 Parent=GSCOCT00032228001 | |
| 69843 chr11 manual_curation gene 30021798 30023291 . + . ID=GSCOCG00032226001;Name=Cc11_g13080 | |
| 69844 chr11 manual_curation mRNA 30021798 30023291 . + . ID=GSCOCT00032226001;Parent=GSCOCG00032226001;Name=Cc11_g13080 | |
| 69845 chr11 manual_curation polypeptide 30021798 30023291 . + . ID=GSCOCP00032226001;Dbxref=SwissProt:Q8GXS8,SwissProt:Q9M9T4,SwissProt:Q9SWI1,TAIR:AT1G14280.1,TAIR:AT1G18810.1,TAIR:AT2G02950.1,TrEMBL:A4UV49,TrEMBL:Q6L3P0,TrEMBL:Q6L3X1;Derives_from=GSCOCT00032226001;Name=Cc11_g13080;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein PHYTOCHROME KINASE SUBSTRATE 3,CC_functional_completeness:modules,CC_gene:PKS1,CC_gene:PKS2,CC_gene:PKS3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032226001~ Putative Protein PHYTOCHROME KINASE SUBSTRATE 3~ PKS1~ modules;original_location=complement(join(1320250..1320868%2C1319375..1320099));owner=coffea | |
| 69846 chr11 manual_curation exon 30022567 30023291 . + . Parent=GSCOCT00032226001 | |
| 69847 chr11 manual_curation exon 30021798 30022416 . + . Parent=GSCOCT00032226001 | |
| 69848 chr11 manual_curation CDS 30022567 30023291 . + 1 Parent=GSCOCT00032226001 | |
| 69849 chr11 manual_curation CDS 30021798 30022416 . + 0 Parent=GSCOCT00032226001 | |
| 69850 chr11 manual_curation gene 30025155 30027852 . - . ID=GSCOCG00032225001;Name=Cc11_g13090 | |
| 69851 chr11 manual_curation mRNA 30025155 30027852 . - . ID=GSCOCT00032225001;Parent=GSCOCG00032225001;Name=Cc11_g13090 | |
| 69852 chr11 manual_curation polypeptide 30025431 30027442 . - . ID=GSCOCP00032225001;Dbxref=InterPro:IPR006694,PFAM:PF04116,SwissProt:O94298,SwissProt:Q8VYI1,SwissProt:Q9AST3,TAIR:AT1G14290.1,TAIR:AT1G69640.1,TrEMBL:A4UV38,TrEMBL:A4UV54,TrEMBL:Q60D00;Derives_from=GSCOCT00032225001;Name=Cc11_g13090;Ontology_term=CC_evidence_code:ISS,GO:0005506,GO:0005783,GO:0006633,GO:0016491,GO:0055114,CC_EC_number:1.14.13.72,PRODUCT:Sphingoid base hydroxylase 2,CC_functional_completeness:complete,CC_gene:SBH2,CC_gene:SBH1,CC_gene:SPBC887.15c;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032225001~ Sphingoid base hydroxylase 2~ SBH2~ complete;original_location=join(1315224..1315454%2C1316681..1317235);owner=coffea | |
| 69853 chr11 manual_curation exon 30027212 30027852 . - . Parent=GSCOCT00032225001 | |
| 69854 chr11 manual_curation exon 30025155 30025985 . - . Parent=GSCOCT00032225001 | |
| 69855 chr11 manual_curation CDS 30027212 30027442 . - 0 Parent=GSCOCT00032225001 | |
| 69856 chr11 manual_curation CDS 30025431 30025985 . - 0 Parent=GSCOCT00032225001 | |
| 69857 chr11 manual_curation gene 30028420 30031477 . - . ID=GSCOCG00032224001;Name=Cc11_g13100 | |
| 69858 chr11 manual_curation mRNA 30028420 30031477 . - . ID=GSCOCT00032224001;Parent=GSCOCG00032224001;Name=Cc11_g13100 | |
| 69859 chr11 manual_curation polypeptide 30028961 30031413 . - . ID=GSCOCP00032224001;Dbxref=InterPro:IPR008721,InterPro:IPR020529,PFAM:PF05460,PRODOM:PD315657,SwissProt:Q9WUJ8,SwissProt:Q9Y5N6,SwissProt:Q9ZVH3,TAIR:AT1G26840.1,TrEMBL:A4UV55,TrEMBL:Q60D01,TrEMBL:Q6L3M2;Derives_from=GSCOCT00032224001;Name=Cc11_g13100;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0005664,GO:0006260,CC_EC_number:missing_EC_number,PRODUCT:Origin recognition complex subunit 6,CC_functional_completeness:complete,CC_gene:ORC6,CC_gene:Orc6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032224001~ Origin recognition complex subunit 6~ ORC6~ complete;original_location=join(1311253..1311372%2C1311476..1311522%2C1311696..1311800%2C1311941..1312021%2C1312462..1312573%2C1312669..1312731%2C1312838..1312925%2C1313067..1313137%2C1313421..1313517%2C1313629..1313705);owner=coffea | |
| 69860 chr11 manual_curation exon 30031294 30031477 . - . Parent=GSCOCT00032224001 | |
| 69861 chr11 manual_curation exon 30031144 30031190 . - . Parent=GSCOCT00032224001 | |
| 69862 chr11 manual_curation exon 30030866 30030970 . - . Parent=GSCOCT00032224001 | |
| 69863 chr11 manual_curation exon 30030645 30030725 . - . Parent=GSCOCT00032224001 | |
| 69864 chr11 manual_curation exon 30030093 30030204 . - . Parent=GSCOCT00032224001 | |
| 69865 chr11 manual_curation exon 30029935 30029997 . - . Parent=GSCOCT00032224001 | |
| 69866 chr11 manual_curation exon 30029741 30029828 . - . Parent=GSCOCT00032224001 | |
| 69867 chr11 manual_curation exon 30029529 30029599 . - . Parent=GSCOCT00032224001 | |
| 69868 chr11 manual_curation exon 30029149 30029245 . - . Parent=GSCOCT00032224001 | |
| 69869 chr11 manual_curation exon 30028420 30029037 . - . Parent=GSCOCT00032224001 | |
| 69870 chr11 manual_curation CDS 30031294 30031413 . - 0 Parent=GSCOCT00032224001 | |
| 69871 chr11 manual_curation CDS 30031144 30031190 . - 0 Parent=GSCOCT00032224001 | |
| 69872 chr11 manual_curation CDS 30030866 30030970 . - 2 Parent=GSCOCT00032224001 | |
| 69873 chr11 manual_curation CDS 30030645 30030725 . - 2 Parent=GSCOCT00032224001 | |
| 69874 chr11 manual_curation CDS 30030093 30030204 . - 2 Parent=GSCOCT00032224001 | |
| 69875 chr11 manual_curation CDS 30029935 30029997 . - 0 Parent=GSCOCT00032224001 | |
| 69876 chr11 manual_curation CDS 30029741 30029828 . - 0 Parent=GSCOCT00032224001 | |
| 69877 chr11 manual_curation CDS 30029529 30029599 . - 1 Parent=GSCOCT00032224001 | |
| 69878 chr11 manual_curation CDS 30029149 30029245 . - 0 Parent=GSCOCT00032224001 | |
| 69879 chr11 manual_curation CDS 30028961 30029037 . - 1 Parent=GSCOCT00032224001 | |
| 69880 chr11 manual_curation gene 30032093 30035828 . - . ID=GSCOCG00032223001;Name=Cc11_g13110 | |
| 69881 chr11 manual_curation mRNA 30032093 30035828 . - . ID=GSCOCT00032223001;Parent=GSCOCG00032223001;Name=Cc11_g13110 | |
| 69882 chr11 manual_curation polypeptide 30032709 30035767 . - . ID=GSCOCP00032223001;Dbxref=GENE3D:G3DSA:1.25.10.10,InterPro:IPR000225,InterPro:IPR007205,InterPro:IPR007206,InterPro:IPR011989,InterPro:IPR016024,PFAM:PF04063,PFAM:PF04064,PROFILE:PS50176,SUPERFAMILY:SSF48371,SwissProt:P0CB43,SwissProt:Q76NW7,SwissProt:Q9BTY7,TAIR:AT1G14300.2,TrEMBL:A4UV36,TrEMBL:A4UV56,TrEMBL:B9N612;Derives_from=GSCOCT00032223001;Name=Cc11_g13110;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:Putative FAM203 family protein DDB_G0276861,CC_functional_completeness:complete,CC_gene:DDB_G0276861,CC_gene:FAM203B,CC_gene:FAM203A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032223001~ Putative FAM203 family protein DDB_G0276861~ DDB_G0276861~ complete;original_location=join(1306899..1306952%2C1307421..1307543%2C1308044..1308241%2C1308502..1308580%2C1308662..1308807%2C1308884..1308997%2C1309295..1309426%2C1309714..1309827%2C1309928..1309957);owner=coffea | |
| 69883 chr11 manual_curation exon 30035714 30035828 . - . Parent=GSCOCT00032223001 | |
| 69884 chr11 manual_curation exon 30035123 30035245 . - . Parent=GSCOCT00032223001 | |
| 69885 chr11 manual_curation exon 30034425 30034622 . - . Parent=GSCOCT00032223001 | |
| 69886 chr11 manual_curation exon 30034086 30034164 . - . Parent=GSCOCT00032223001 | |
| 69887 chr11 manual_curation exon 30033859 30034004 . - . Parent=GSCOCT00032223001 | |
| 69888 chr11 manual_curation exon 30033669 30033782 . - . Parent=GSCOCT00032223001 | |
| 69889 chr11 manual_curation exon 30033240 30033371 . - . Parent=GSCOCT00032223001 | |
| 69890 chr11 manual_curation exon 30032839 30032952 . - . Parent=GSCOCT00032223001 | |
| 69891 chr11 manual_curation exon 30032093 30032738 . - . Parent=GSCOCT00032223001 | |
| 69892 chr11 manual_curation CDS 30035714 30035767 . - 0 Parent=GSCOCT00032223001 | |
| 69893 chr11 manual_curation CDS 30035123 30035245 . - 0 Parent=GSCOCT00032223001 | |
| 69894 chr11 manual_curation CDS 30034425 30034622 . - 0 Parent=GSCOCT00032223001 | |
| 69895 chr11 manual_curation CDS 30034086 30034164 . - 0 Parent=GSCOCT00032223001 | |
| 69896 chr11 manual_curation CDS 30033859 30034004 . - 1 Parent=GSCOCT00032223001 | |
| 69897 chr11 manual_curation CDS 30033669 30033782 . - 0 Parent=GSCOCT00032223001 | |
| 69898 chr11 manual_curation CDS 30033240 30033371 . - 0 Parent=GSCOCT00032223001 | |
| 69899 chr11 manual_curation CDS 30032839 30032952 . - 0 Parent=GSCOCT00032223001 | |
| 69900 chr11 manual_curation CDS 30032709 30032738 . - 0 Parent=GSCOCT00032223001 | |
| 69901 chr11 manual_curation gene 30038008 30039354 . - . ID=GSCOCG00032222001;Name=Cc11_g13120 | |
| 69902 chr11 manual_curation mRNA 30038008 30039354 . - . ID=GSCOCT00032222001;Parent=GSCOCG00032222001;Name=Cc11_g13120 | |
| 69903 chr11 manual_curation polypeptide 30038371 30039354 . - . ID=GSCOCP00032222001;Dbxref=GENE3D:G3DSA:1.10.10.10,InterPro:IPR001373,InterPro:IPR011991,InterPro:IPR016158,InterPro:IPR019559,PFAM:PF00888,PFAM:PF10557,PROFILE:PS50069,SMART:SM00182,SMART:SM00884,SUPERFAMILY:SSF75632,SwissProt:Q54NZ5,SwissProt:Q9C9L0,SwissProt:Q9ZVH4,TAIR:AT1G26830.1,TAIR:AT1G69670.1,TAIR:AT5G46210.1,TrEMBL:D7KPN4;Derives_from=GSCOCT00032222001;Name=Cc11_g13120;Ontology_term=CC_evidence_code:ISS,GO:0006511,GO:0031461,GO:0031625,CC_EC_number:missing_EC_number,PRODUCT:Cullin-3A,CC_functional_completeness:fragment,CC_gene:CUL3A,CC_gene:CUL3B,CC_gene:culC;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032222001~ Cullin-3A~ CUL3A~ fragment;original_location=1303312..1304295;owner=coffea | |
| 69904 chr11 manual_curation exon 30038008 30039354 . - . Parent=GSCOCT00032222001 | |
| 69905 chr11 manual_curation CDS 30038371 30039354 . - 0 Parent=GSCOCT00032222001 | |
| 69906 chr11 manual_curation gene 30039489 30042750 . - . ID=GSCOCG00032221001;Name=Cc11_g13130 | |
| 69907 chr11 manual_curation mRNA 30039489 30042750 . - . ID=GSCOCT00032221001;Parent=GSCOCG00032221001;Name=Cc11_g13130 | |
| 69908 chr11 manual_curation polypeptide 30039489 30042439 . - . ID=GSCOCP00032221001;Dbxref=InterPro:IPR001373,InterPro:IPR016159,PFAM:PF00888,SUPERFAMILY:SSF74788,SwissProt:Q54NZ5,SwissProt:Q9C9L0,SwissProt:Q9ZVH4,TAIR:AT1G26830.1,TAIR:AT1G69670.1,TAIR:AT5G46210.1,TrEMBL:A5C158,TrEMBL:B9HJT6,TrEMBL:B9HV99;Derives_from=GSCOCT00032221001;Name=Cc11_g13130;Ontology_term=CC_evidence_code:ISS,GO:0006511,GO:0031461,GO:0031625,CC_EC_number:missing_EC_number,PRODUCT:Cullin-3A,CC_functional_completeness:fragment,CC_gene:CUL3A,CC_gene:CUL3B,CC_gene:culC;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032221001~ Cullin-3A~ CUL3A~ fragment;original_location=join(1300227..1300393%2C1302255..1303089%2C1303142..1303177);owner=coffea | |
| 69909 chr11 manual_curation exon 30042273 30042750 . - . Parent=GSCOCT00032221001 | |
| 69910 chr11 manual_curation exon 30039577 30040411 . - . Parent=GSCOCT00032221001 | |
| 69911 chr11 manual_curation exon 30039489 30039524 . - . Parent=GSCOCT00032221001 | |
| 69912 chr11 manual_curation CDS 30042273 30042439 . - 0 Parent=GSCOCT00032221001 | |
| 69913 chr11 manual_curation CDS 30039577 30040411 . - 2 Parent=GSCOCT00032221001 | |
| 69914 chr11 manual_curation CDS 30039489 30039524 . - 0 Parent=GSCOCT00032221001 | |
| 69915 chr11 manual_curation gene 30045092 30048490 . + . ID=GSCOCG00032220001;Name=Cc11_g13140 | |
| 69916 chr11 manual_curation mRNA 30045092 30048490 . + . ID=GSCOCT00032220001;Parent=GSCOCG00032220001;Name=Cc11_g13140 | |
| 69917 chr11 manual_curation polypeptide 30045419 30048051 . + . ID=GSCOCP00032220001;Dbxref=GENE3D:G3DSA:3.40.1000.10,InterPro:IPR007681,InterPro:IPR016123,InterPro:IPR016124,PFAM:PF04603,SUPERFAMILY:SSF55724,SwissProt:Q32PE2,SwissProt:Q54ML6,SwissProt:Q9JIB0,TAIR:AT1G69680.1,TrEMBL:B9SDW8,TrEMBL:C6THV2,TrEMBL:G7KCJ8;Derives_from=GSCOCT00032220001;Name=Cc11_g13140;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable ran guanine nucleotide release factor,CC_functional_completeness:complete,CC_gene:mog1,CC_gene:RANGRF,CC_gene:Rangrf;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032220001~ Putative Probable ran guanine nucleotide release factor~ mog1~ complete;original_location=complement(join(1297173..1297247%2C1297030..1297065%2C1296777..1296914%2C1295503..1295589%2C1295240..1295287%2C1295081..1295157%2C1294615..1294762));owner=coffea | |
| 69918 chr11 manual_curation exon 30045092 30045315 . + . Parent=GSCOCT00032220001 | |
| 69919 chr11 manual_curation exon 30047904 30048490 . + . Parent=GSCOCT00032220001 | |
| 69920 chr11 manual_curation exon 30047509 30047585 . + . Parent=GSCOCT00032220001 | |
| 69921 chr11 manual_curation exon 30047379 30047426 . + . Parent=GSCOCT00032220001 | |
| 69922 chr11 manual_curation exon 30047077 30047163 . + . Parent=GSCOCT00032220001 | |
| 69923 chr11 manual_curation exon 30045752 30045889 . + . Parent=GSCOCT00032220001 | |
| 69924 chr11 manual_curation exon 30045601 30045636 . + . Parent=GSCOCT00032220001 | |
| 69925 chr11 manual_curation exon 30045400 30045493 . + . Parent=GSCOCT00032220001 | |
| 69926 chr11 manual_curation CDS 30047904 30048051 . + 2 Parent=GSCOCT00032220001 | |
| 69927 chr11 manual_curation CDS 30047509 30047585 . + 0 Parent=GSCOCT00032220001 | |
| 69928 chr11 manual_curation CDS 30047379 30047426 . + 0 Parent=GSCOCT00032220001 | |
| 69929 chr11 manual_curation CDS 30047077 30047163 . + 0 Parent=GSCOCT00032220001 | |
| 69930 chr11 manual_curation CDS 30045752 30045889 . + 0 Parent=GSCOCT00032220001 | |
| 69931 chr11 manual_curation CDS 30045601 30045636 . + 0 Parent=GSCOCT00032220001 | |
| 69932 chr11 manual_curation CDS 30045419 30045493 . + 0 Parent=GSCOCT00032220001 | |
| 69933 chr11 manual_curation gene 30056329 30057567 . + . ID=GSCOCG00032218001;Name=Cc11_g13150 | |
| 69934 chr11 manual_curation mRNA 30056329 30057567 . + . ID=GSCOCT00032218001;Parent=GSCOCG00032218001;Name=Cc11_g13150 | |
| 69935 chr11 manual_curation polypeptide 30056329 30057567 . + . ID=GSCOCP00032218001;Dbxref=InterPro:IPR005333,InterPro:IPR017887,PFAM:PF03634,PROFILE:PS51369,SwissProt:Q93Z00,SwissProt:Q9C518,SwissProt:Q9C9L2,TAIR:AT1G58100.1,TAIR:AT1G69690.1,TAIR:AT3G47620.1,TrEMBL:B5G4Z3,TrEMBL:F6GT89,TrEMBL:G7JQY3;Derives_from=GSCOCT00032218001;Name=Cc11_g13150;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative BHLH (Fragment),CC_functional_completeness:complete,CC_gene:TCP14,CC_gene:TCP15,CC_gene:TCP8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032218001~ Putative BHLH (Fragment)~ TCP14~ complete;original_location=complement(1285099..1286337);owner=coffea | |
| 69936 chr11 manual_curation exon 30056329 30057567 . + . Parent=GSCOCT00032218001 | |
| 69937 chr11 manual_curation CDS 30056329 30057567 . + 0 Parent=GSCOCT00032218001 | |
| 69938 chr11 manual_curation gene 30062023 30065282 . + . ID=GSCOCG00032217001;Name=Cc11_g13160 | |
| 69939 chr11 manual_curation mRNA 30062023 30065282 . + . ID=GSCOCT00032217001;Parent=GSCOCG00032217001;Name=Cc11_g13160 | |
| 69940 chr11 manual_curation polypeptide 30062178 30064919 . + . ID=GSCOCP00032217001;Dbxref=InterPro:IPR004345,PANTHER:PTHR12300,PFAM:PF03134,SwissProt:Q9S784,SwissProt:Q9S7V4,SwissProt:Q9SYX7,TAIR:AT1G69700.1,TAIR:AT1G74520.1,TAIR:AT5G62490.1,TrEMBL:A4UV42,TrEMBL:D7TNA4,TrEMBL:Q60CZ6;Derives_from=GSCOCT00032217001;Name=Cc11_g13160;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:HVA22-like protein a,CC_functional_completeness:complete,CC_gene:HVA22A,CC_gene:HVA22C,CC_gene:HVA22B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032217001~ HVA22-like protein a~ HVA22A~ complete;original_location=complement(join(1280427..1280488%2C1280184..1280210%2C1279614..1279736%2C1278526..1278766%2C1277747..1277815));owner=coffea | |
| 69941 chr11 manual_curation exon 30064851 30065282 . + . Parent=GSCOCT00032217001 | |
| 69942 chr11 manual_curation exon 30063900 30064140 . + . Parent=GSCOCT00032217001 | |
| 69943 chr11 manual_curation exon 30062930 30063052 . + . Parent=GSCOCT00032217001 | |
| 69944 chr11 manual_curation exon 30062456 30062482 . + . Parent=GSCOCT00032217001 | |
| 69945 chr11 manual_curation exon 30062023 30062239 . + . Parent=GSCOCT00032217001 | |
| 69946 chr11 manual_curation CDS 30064851 30064919 . + 0 Parent=GSCOCT00032217001 | |
| 69947 chr11 manual_curation CDS 30063900 30064140 . + 2 Parent=GSCOCT00032217001 | |
| 69948 chr11 manual_curation CDS 30062930 30063052 . + 2 Parent=GSCOCT00032217001 | |
| 69949 chr11 manual_curation CDS 30062456 30062482 . + 2 Parent=GSCOCT00032217001 | |
| 69950 chr11 manual_curation CDS 30062178 30062239 . + 0 Parent=GSCOCT00032217001 | |
| 69951 chr11 manual_curation gene 30067192 30075145 . + . ID=GSCOCG00032216001;Name=Cc11_g13170 | |
| 69952 chr11 manual_curation mRNA 30067192 30075145 . + . ID=GSCOCT00032216001;Parent=GSCOCG00032216001;Name=Cc11_g13170 | |
| 69953 chr11 manual_curation polypeptide 30067192 30075145 . + . ID=GSCOCP00032216001;Dbxref=GENE3D:G3DSA:2.130.10.30,GENE3D:G3DSA:2.30.29.30,InterPro:IPR000306,InterPro:IPR000408,InterPro:IPR009091,InterPro:IPR011011,InterPro:IPR011993,InterPro:IPR013591,InterPro:IPR017455,PFAM:PF00415,PFAM:PF01363,PFAM:PF08381,PRINTS:PR00633,PROFILE:PS50012,PROFILE:PS50178,PROSITE:PS00626,SMART:SM00064,SUPERFAMILY:SSF50985,SUPERFAMILY:SSF57903,SwissProt:O95714,SwissProt:Q15751,SwissProt:Q4U2R1,TAIR:AT1G69710.1,TAIR:AT5G12350.1,TAIR:AT5G19420.2,TrEMBL:B9S8T2,TrEMBL:F6HA19,TrEMBL:Q60CZ5;Derives_from=GSCOCT00032216001;Name=Cc11_g13170;Ontology_term=CC_evidence_code:ISS,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable E3 ubiquitin-protein ligase HERC1,CC_functional_completeness:fragment,CC_gene:HERC1,CC_gene:Herc2,CC_gene:HERC2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032216001~ Putative Probable E3 ubiquitin-protein ligase HERC1~ HERC1~ fragment;original_location=complement(join(1275427..1275474%2C1275247..1275333%2C1273978..1274067%2C1273240..1273320%2C1272965..1273123%2C1270760..1272874%2C1269582..1269728%2C1268654..1268946%2C1267521..1267614));owner=coffea | |
| 69954 chr11 manual_curation exon 30075052 30075145 . + . Parent=GSCOCT00032216001 | |
| 69955 chr11 manual_curation exon 30073720 30074012 . + . Parent=GSCOCT00032216001 | |
| 69956 chr11 manual_curation exon 30072938 30073084 . + . Parent=GSCOCT00032216001 | |
| 69957 chr11 manual_curation exon 30069792 30071906 . + . Parent=GSCOCT00032216001 | |
| 69958 chr11 manual_curation exon 30069543 30069701 . + . Parent=GSCOCT00032216001 | |
| 69959 chr11 manual_curation exon 30069346 30069426 . + . Parent=GSCOCT00032216001 | |
| 69960 chr11 manual_curation exon 30068599 30068688 . + . Parent=GSCOCT00032216001 | |
| 69961 chr11 manual_curation exon 30067333 30067419 . + . Parent=GSCOCT00032216001 | |
| 69962 chr11 manual_curation exon 30067192 30067239 . + . Parent=GSCOCT00032216001 | |
| 69963 chr11 manual_curation CDS 30075052 30075145 . + 2 Parent=GSCOCT00032216001 | |
| 69964 chr11 manual_curation CDS 30073720 30074012 . + 0 Parent=GSCOCT00032216001 | |
| 69965 chr11 manual_curation CDS 30072938 30073084 . + 0 Parent=GSCOCT00032216001 | |
| 69966 chr11 manual_curation CDS 30069792 30071906 . + 0 Parent=GSCOCT00032216001 | |
| 69967 chr11 manual_curation CDS 30069543 30069701 . + 0 Parent=GSCOCT00032216001 | |
| 69968 chr11 manual_curation CDS 30069346 30069426 . + 0 Parent=GSCOCT00032216001 | |
| 69969 chr11 manual_curation CDS 30068599 30068688 . + 0 Parent=GSCOCT00032216001 | |
| 69970 chr11 manual_curation CDS 30067333 30067419 . + 0 Parent=GSCOCT00032216001 | |
| 69971 chr11 manual_curation CDS 30067192 30067239 . + 0 Parent=GSCOCT00032216001 | |
| 69972 chr11 manual_curation gene 30075260 30077792 . - . ID=GSCOCG00032215001;Name=Cc11_g13180 | |
| 69973 chr11 manual_curation mRNA 30075260 30077792 . - . ID=GSCOCT00032215001;Parent=GSCOCG00032215001;Name=Cc11_g13180 | |
| 69974 chr11 manual_curation polypeptide 30075974 30077719 . - . ID=GSCOCP00032215001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:Q9LN01,SwissProt:Q9LTV8,SwissProt:Q9ZVG8,TAIR:AT1G08070.1,TAIR:AT1G26900.1,TAIR:AT3G12770.1,TIGRFAMs:TIGR00756,TrEMBL:D7KPN1,TrEMBL:F6HPD4,TrEMBL:G7IPV3;Derives_from=GSCOCT00032215001;Name=Cc11_g13180;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At1g26900%2C mitochondrial,CC_functional_completeness:complete,CC_gene:PCMP-E54,CC_gene:PCMP-H12,CC_gene:PCMP-H43;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032215001~ Pentatricopeptide repeat-containing protein At1g26900%2C mitochondrial~ PCMP-E54~ complete;original_location=1264947..1266692;owner=coffea | |
| 69975 chr11 manual_curation exon 30075260 30077792 . - . Parent=GSCOCT00032215001 | |
| 69976 chr11 manual_curation CDS 30075974 30077719 . - 0 Parent=GSCOCT00032215001 | |
| 69977 chr11 manual_curation gene 30078708 30080618 . - . ID=GSCOCG00032214001;Name=Cc11_g13190 | |
| 69978 chr11 manual_curation mRNA 30078708 30080618 . - . ID=GSCOCT00032214001;Parent=GSCOCG00032214001;Name=Cc11_g13190 | |
| 69979 chr11 manual_curation polypeptide 30078708 30080618 . - . ID=GSCOCP00032214001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:O82380,SwissProt:Q9LSB8,SwissProt:Q9SJZ3,TAIR:AT2G22410.1,TAIR:AT2G29760.1,TAIR:AT3G15930.1,TIGRFAMs:TIGR00756,TrEMBL:B9R9I2,TrEMBL:G7L3I9,TrEMBL:I1L6M3;Derives_from=GSCOCT00032214001;Name=Cc11_g13190;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Pentatricopeptide repeat-containing protein At2g29760%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:PCMP-H33,CC_gene:PCMP-E28,CC_gene:PCMP-E51;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032214001~ Putative Pentatricopeptide repeat-containing protein At2g29760%2C chloroplastic~ PCMP-H33~ fragment;original_location=1262048..1263958;owner=coffea | |
| 69980 chr11 manual_curation exon 30078708 30080618 . - . Parent=GSCOCT00032214001 | |
| 69981 chr11 manual_curation CDS 30078708 30080618 . - 0 Parent=GSCOCT00032214001 | |
| 69982 chr11 manual_curation gene 30080771 30084290 . - . ID=GSCOCG00032213001;Name=Cc11_g13200 | |
| 69983 chr11 manual_curation mRNA 30080771 30084290 . - . ID=GSCOCT00032213001;Parent=GSCOCG00032213001;Name=Cc11_g13200 | |
| 69984 chr11 manual_curation polypeptide 30081204 30083738 . - . ID=GSCOCP00032213001;Dbxref=InterPro:IPR002541,InterPro:IPR005018,InterPro:IPR006593,InterPro:IPR006609,InterPro:IPR013050,InterPro:IPR019545,PFAM:PF01578,PFAM:PF03351,PFAM:PF10517,PROFILE:PS50836,PROFILE:PS50939,SMART:SM00664,SMART:SM00665,SMART:SM00686,SwissProt:Q9GPJ1,SwissProt:Q9VGY6,TAIR:AT3G61750.1,TAIR:AT5G54830.1,TrEMBL:A5C8J7,TrEMBL:B9IL40,TrEMBL:F6H3I9;Derives_from=GSCOCT00032213001;Name=Cc11_g13200;Ontology_term=CC_evidence_code:ISS,GO:0004500,GO:0006461,GO:0006548,GO:0008535,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:DOMON domain-containing protein / dopamine beta-monooxygenase N-terminal domain-containing protein,CC_functional_completeness:complete,CC_gene:Skeletor;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032213001~ DOMON domain-containing protein / dopamine beta-monooxygenase N-terminal domain-containing protein~ Skeletor~ complete;original_location=1258928..1261462;owner=coffea | |
| 69985 chr11 manual_curation exon 30080771 30084290 . - . Parent=GSCOCT00032213001 | |
| 69986 chr11 manual_curation CDS 30081204 30083738 . - 0 Parent=GSCOCT00032213001 | |
| 69987 chr11 manual_curation gene 30084591 30087483 . - . ID=GSCOCG00032212001;Name=Cc11_g13210 | |
| 69988 chr11 manual_curation mRNA 30084591 30087483 . - . ID=GSCOCT00032212001;Parent=GSCOCG00032212001;Name=Cc11_g13210 | |
| 69989 chr11 manual_curation polypeptide 30085098 30087483 . - . ID=GSCOCP00032212001;Dbxref=TAIR:AT2G02880.1,TAIR:AT5G62270.2,TrEMBL:B9S8T0,TrEMBL:F6H939,TrEMBL:I1JE28;Derives_from=GSCOCT00032212001;Name=Cc11_g13210;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:mucin-related,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032212001~ mucin-related~ unknown_gene~ complete;original_location=join(1255183..1255754%2C1256618..1256804%2C1257362..1257568);owner=coffea | |
| 69990 chr11 manual_curation exon 30086912 30087483 . - . Parent=GSCOCT00032212001 | |
| 69991 chr11 manual_curation exon 30085862 30086048 . - . Parent=GSCOCT00032212001 | |
| 69992 chr11 manual_curation exon 30084591 30085304 . - . Parent=GSCOCT00032212001 | |
| 69993 chr11 manual_curation CDS 30086912 30087483 . - 0 Parent=GSCOCT00032212001 | |
| 69994 chr11 manual_curation CDS 30085862 30086048 . - 2 Parent=GSCOCT00032212001 | |
| 69995 chr11 manual_curation CDS 30085098 30085304 . - 0 Parent=GSCOCT00032212001 | |
| 69996 chr11 manual_curation gene 30091848 30092555 . - . ID=GSCOCG00032211001;Name=Cc11_g13220 | |
| 69997 chr11 manual_curation mRNA 30091848 30092555 . - . ID=GSCOCT00032211001;Parent=GSCOCG00032211001;Name=Cc11_g13220 | |
| 69998 chr11 manual_curation polypeptide 30091848 30092555 . - . ID=GSCOCP00032211001;Dbxref=InterPro:IPR001950,PFAM:PF01253,PROFILE:PS50296,SUPERFAMILY:SSF55159,SwissProt:A6MZM2,SwissProt:P56330,SwissProt:Q0D5W6,TAIR:AT1G54290.1,TAIR:AT4G27130.1,TAIR:AT5G54760.1,TrEMBL:F6H9A6;Derives_from=GSCOCT00032211001;Name=Cc11_g13220;Ontology_term=CC_evidence_code:ISS,GO:0003743,GO:0006413,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:TIF,CC_gene:GOS2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032211001~ Hypothetical protein~ TIF~ missing_functional_completeness;original_location=1250111..1250818;owner=coffea | |
| 69999 chr11 manual_curation exon 30091848 30092555 . - . Parent=GSCOCT00032211001 | |
| 70000 chr11 manual_curation CDS 30091848 30092555 . - 0 Parent=GSCOCT00032211001 | |
| 70001 chr11 manual_curation gene 30096285 30099239 . + . ID=GSCOCG00032209001;Name=Cc11_g13230 | |
| 70002 chr11 manual_curation mRNA 30096285 30099239 . + . ID=GSCOCT00032209001;Parent=GSCOCG00032209001;Name=Cc11_g13230 | |
| 70003 chr11 manual_curation polypeptide 30096391 30098796 . + . ID=GSCOCP00032209001;Dbxref=InterPro:IPR001912,InterPro:IPR002942,InterPro:IPR005710,InterPro:IPR018079,InterPro:IPR022801,PANTHER:PTHR11831,PFAM:PF00163,PFAM:PF01479,PROFILE:PS50889,PROSITE:PS00632,SMART:SM00363,SwissProt:P29314,SwissProt:Q9FLF0,SwissProt:Q9LXG1,TAIR:AT5G15200.1,TAIR:AT5G39850.1,TIGRFAMs:TIGR01018;Derives_from=GSCOCT00032209001;Name=Cc11_g13230;Ontology_term=CC_evidence_code:ISS,GO:0003723,GO:0003735,GO:0005622,GO:0006412,GO:0015935,GO:0019843,CC_EC_number:missing_EC_number,PRODUCT:40S ribosomal protein S9-2,CC_functional_completeness:complete,CC_gene:RPS9C,CC_gene:RPS9B,CC_gene:Rps9;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032209001~ 40S ribosomal protein S9-2~ RPS9C~ complete;original_location=complement(join(1246248..1246275%2C1244944..1245325%2C1243870..1244053));owner=coffea | |
| 70004 chr11 manual_curation exon 30098613 30099239 . + . Parent=GSCOCT00032209001 | |
| 70005 chr11 manual_curation exon 30097341 30097722 . + . Parent=GSCOCT00032209001 | |
| 70006 chr11 manual_curation exon 30096285 30096418 . + . Parent=GSCOCT00032209001 | |
| 70007 chr11 manual_curation CDS 30098613 30098796 . + 2 Parent=GSCOCT00032209001 | |
| 70008 chr11 manual_curation CDS 30097341 30097722 . + 1 Parent=GSCOCT00032209001 | |
| 70009 chr11 manual_curation CDS 30096391 30096418 . + 0 Parent=GSCOCT00032209001 | |
| 70010 chr11 manual_curation gene 30108827 30109868 . - . ID=GSCOCG00032208001;Name=Cc11_g13240 | |
| 70011 chr11 manual_curation mRNA 30108827 30109868 . - . ID=GSCOCT00032208001;Parent=GSCOCG00032208001;Name=Cc11_g13240 | |
| 70012 chr11 manual_curation polypeptide 30109285 30109776 . - . ID=GSCOCP00032208001;Dbxref=TAIR:AT1G26920.1,TAIR:AT1G69760.1,TrEMBL:C6TEA5,TrEMBL:F6HPD5,TrEMBL:I1J5N7;Derives_from=GSCOCT00032208001;Name=Cc11_g13240;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032208001~ Putative unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G69760.1)%3B Has 47 Blast hits to 47 proteins in 13 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 7%3B Plants - 34%3B Viruses - 0%3B Other Eukaryotes - 6 (source: NCBI BLink).~ unknown_gene~ complete;original_location=1232890..1233381;owner=coffea | |
| 70013 chr11 manual_curation exon 30108827 30109868 . - . Parent=GSCOCT00032208001 | |
| 70014 chr11 manual_curation CDS 30109285 30109776 . - 0 Parent=GSCOCT00032208001 | |
| 70015 chr11 manual_curation gene 30123620 30128568 . - . ID=GSCOCG00032206001;Name=Cc11_g13250 | |
| 70016 chr11 manual_curation mRNA 30123620 30128568 . - . ID=GSCOCT00032206001;Parent=GSCOCG00032206001;Name=Cc11_g13250 | |
| 70017 chr11 manual_curation polypeptide 30125956 30127293 . - . ID=GSCOCP00032206001;Dbxref=GENE3D:G3DSA:2.120.10.80,InterPro:IPR006652,InterPro:IPR011043,InterPro:IPR013089,InterPro:IPR015915,PANTHER:PTHR23230,PFAM:PF01344,SMART:SM00612,SUPERFAMILY:SSF50965,SwissProt:Q84M94,SwissProt:Q8L736,SwissProt:Q9CA63,TAIR:AT1G14330.1,TAIR:AT1G26930.1,TAIR:AT2G02870.1,TrEMBL:B9T873,TrEMBL:F6HPD7,TrEMBL:Q6L3I4;Derives_from=GSCOCT00032206001;Name=Cc11_g13250;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:F-box/kelch-repeat protein SKIP11,CC_functional_completeness:complete,CC_gene:SKIP11,CC_gene:At1g26930,CC_gene:At1g74510;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032206001~ F-box/kelch-repeat protein SKIP11~ SKIP11~ complete;original_location=1215373..1216710;owner=coffea | |
| 70018 chr11 manual_curation exon 30123620 30124095 . - . Parent=GSCOCT00032206001 | |
| 70019 chr11 manual_curation exon 30125863 30128568 . - . Parent=GSCOCT00032206001 | |
| 70020 chr11 manual_curation CDS 30125956 30127293 . - 0 Parent=GSCOCT00032206001 | |
| 70021 chr11 manual_curation gene 30140291 30144695 . + . ID=GSCOCG00032205001;Name=Cc11_g13260 | |
| 70022 chr11 manual_curation mRNA 30140291 30144695 . + . ID=GSCOCT00032205001;Parent=GSCOCG00032205001;Name=Cc11_g13260 | |
| 70023 chr11 manual_curation polypeptide 30140412 30144695 . + . ID=GSCOCP00032205001;Dbxref=GENE3D:G3DSA:2.40.100.10,InterPro:IPR002130,InterPro:IPR015891,PFAM:PF00160,PRINTS:PR00153,PROFILE:PS50072,SUPERFAMILY:SSF50891,SwissProt:Q57D43,SwissProt:Q8G0J9,SwissProt:Q8YHB5,TAIR:AT1G26940.1,TAIR:AT2G36130.1,TAIR:AT3G44600.1,TrEMBL:B7FMU5,TrEMBL:B9HXT8,TrEMBL:D7TNB2;Derives_from=GSCOCT00032205001;Name=Cc11_g13260;Ontology_term=CC_evidence_code:ISS,GO:0003755,GO:0006457,CC_EC_number:5.2.1.8,PRODUCT:Putative Probable peptidyl-prolyl cis-trans isomerase,CC_functional_completeness:modules,CC_gene:ppi;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032205001~ Putative Probable peptidyl-prolyl cis-trans isomerase~ ppi~ modules;original_location=complement(join(1202129..1202254%2C1200945..1201058%2C1200701..1200849%2C1200041..1200113%2C1199859..1199948%2C1199189..1199228%2C1198073..1198155%2C1197971..1197991));owner=coffea | |
| 70024 chr11 manual_curation exon 30144675 30144695 . + . Parent=GSCOCT00032205001 | |
| 70025 chr11 manual_curation exon 30144511 30144593 . + . Parent=GSCOCT00032205001 | |
| 70026 chr11 manual_curation exon 30143438 30143477 . + . Parent=GSCOCT00032205001 | |
| 70027 chr11 manual_curation exon 30142718 30142807 . + . Parent=GSCOCT00032205001 | |
| 70028 chr11 manual_curation exon 30142553 30142625 . + . Parent=GSCOCT00032205001 | |
| 70029 chr11 manual_curation exon 30141817 30141965 . + . Parent=GSCOCT00032205001 | |
| 70030 chr11 manual_curation exon 30141608 30141721 . + . Parent=GSCOCT00032205001 | |
| 70031 chr11 manual_curation exon 30140291 30140537 . + . Parent=GSCOCT00032205001 | |
| 70032 chr11 manual_curation CDS 30144675 30144695 . + 0 Parent=GSCOCT00032205001 | |
| 70033 chr11 manual_curation CDS 30144511 30144593 . + 1 Parent=GSCOCT00032205001 | |
| 70034 chr11 manual_curation CDS 30143438 30143477 . + 0 Parent=GSCOCT00032205001 | |
| 70035 chr11 manual_curation CDS 30142718 30142807 . + 0 Parent=GSCOCT00032205001 | |
| 70036 chr11 manual_curation CDS 30142553 30142625 . + 2 Parent=GSCOCT00032205001 | |
| 70037 chr11 manual_curation CDS 30141817 30141965 . + 0 Parent=GSCOCT00032205001 | |
| 70038 chr11 manual_curation CDS 30141608 30141721 . + 0 Parent=GSCOCT00032205001 | |
| 70039 chr11 manual_curation CDS 30140412 30140537 . + 0 Parent=GSCOCT00032205001 | |
| 70040 chr11 manual_curation gene 30160005 30160877 . + . ID=GSCOCG00032203001;Name=Cc11_g13270 | |
| 70041 chr11 manual_curation mRNA 30160005 30160877 . + . ID=GSCOCT00032203001;Parent=GSCOCG00032203001;Name=Cc11_g13270 | |
| 70042 chr11 manual_curation polypeptide 30160005 30160750 . + . ID=GSCOCP00032203001;Dbxref=InterPro:IPR001092,InterPro:IPR011598,PFAM:PF00010,PROFILE:PS50888,SUPERFAMILY:SSF47459,SwissProt:Q9CA64,TAIR:AT1G26945.1,TAIR:AT3G28857.1,TAIR:AT3G47710.1,TrEMBL:A5BU53,TrEMBL:B9RUP9,TrEMBL:C6SVW0,TrEMBL:C6TBH0,TrEMBL:G7KZY5,TrEMBL:I1J5N3,TrEMBL:I1L5Y6;Derives_from=GSCOCT00032203001;Name=Cc11_g13270;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0030528,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Transcription factor bHLH135,CC_functional_completeness:complete,CC_gene:BHLH135;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032203001~ Transcription factor bHLH135~ BHLH135~ complete;original_location=complement(join(1182536..1182661%2C1181916..1182068));owner=coffea | |
| 70043 chr11 manual_curation exon 30160598 30160877 . + . Parent=GSCOCT00032203001 | |
| 70044 chr11 manual_curation exon 30160005 30160130 . + . Parent=GSCOCT00032203001 | |
| 70045 chr11 manual_curation CDS 30160598 30160750 . + 0 Parent=GSCOCT00032203001 | |
| 70046 chr11 manual_curation CDS 30160005 30160130 . + 0 Parent=GSCOCT00032203001 | |
| 70047 chr11 manual_curation gene 30163936 30167424 . + . ID=GSCOCG00032202001;Name=Cc11_g13280 | |
| 70048 chr11 manual_curation mRNA 30163936 30167424 . + . ID=GSCOCT00032202001;Parent=GSCOCG00032202001;Name=Cc11_g13280 | |
| 70049 chr11 manual_curation polypeptide 30165005 30167087 . + . ID=GSCOCP00032202001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR001395,InterPro:IPR012677,PANTHER:PTHR11732,PFAM:PF00076,PROFILE:PS50102,SMART:SM00360,SwissProt:P87216,TAIR:AT1G14340.1,TAIR:AT3G01210.1,TAIR:AT5G32450.1,TrEMBL:B7FK95,TrEMBL:I1JBM4,TrEMBL:Q6L4J2;Derives_from=GSCOCT00032202001;Name=Cc11_g13280;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,GO:0016491,GO:0055114,CC_EC_number:missing_EC_number,PRODUCT:RNA-binding (RRM/RBD/RNP motifs) family protein,CC_functional_completeness:complete,CC_gene:vip1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032202001~ RNA-binding (RRM/RBD/RNP motifs) family protein~ vip1~ complete;original_location=complement(join(1177546..1177661%2C1176973..1177048%2C1176124..1176237%2C1175579..1176007));owner=coffea | |
| 70050 chr11 manual_curation exon 30164682 30164735 . + . Parent=GSCOCT00032202001 | |
| 70051 chr11 manual_curation exon 30163936 30164045 . + . Parent=GSCOCT00032202001 | |
| 70052 chr11 manual_curation exon 30166659 30167424 . + . Parent=GSCOCT00032202001 | |
| 70053 chr11 manual_curation exon 30166429 30166542 . + . Parent=GSCOCT00032202001 | |
| 70054 chr11 manual_curation exon 30165618 30165693 . + . Parent=GSCOCT00032202001 | |
| 70055 chr11 manual_curation exon 30164990 30165120 . + . Parent=GSCOCT00032202001 | |
| 70056 chr11 manual_curation CDS 30166659 30167087 . + 0 Parent=GSCOCT00032202001 | |
| 70057 chr11 manual_curation CDS 30166429 30166542 . + 0 Parent=GSCOCT00032202001 | |
| 70058 chr11 manual_curation CDS 30165618 30165693 . + 2 Parent=GSCOCT00032202001 | |
| 70059 chr11 manual_curation CDS 30165005 30165120 . + 0 Parent=GSCOCT00032202001 | |
| 70060 chr11 manual_curation gene 30168142 30168957 . + . ID=GSCOCG00032201001;Name=Cc11_g13290 | |
| 70061 chr11 manual_curation mRNA 30168142 30168957 . + . ID=GSCOCT00032201001;Parent=GSCOCG00032201001;Name=Cc11_g13290 | |
| 70062 chr11 manual_curation polypeptide 30168142 30168957 . + . ID=GSCOCP00032201001;Dbxref=TAIR:AT5G24460.1,TrEMBL:F6H773,TrEMBL:I1JYH7,TrEMBL:I1KB19;Derives_from=GSCOCT00032201001;Name=Cc11_g13290;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032201001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(1173709..1174524);owner=coffea | |
| 70063 chr11 manual_curation exon 30168142 30168957 . + . Parent=GSCOCT00032201001 | |
| 70064 chr11 manual_curation CDS 30168142 30168957 . + 0 Parent=GSCOCT00032201001 | |
| 70065 chr11 manual_curation gene 30169359 30175088 . + . ID=GSCOCG00032200001;Name=Cc11_g13300 | |
| 70066 chr11 manual_curation mRNA 30169359 30175088 . + . ID=GSCOCT00032200001;Parent=GSCOCG00032200001;Name=Cc11_g13300 | |
| 70067 chr11 manual_curation polypeptide 30169694 30174643 . + . ID=GSCOCP00032200001;Dbxref=InterPro:IPR005989,InterPro:IPR011701,InterPro:IPR016196,PFAM:PF07690,SUPERFAMILY:SSF103473,SwissProt:B8AF63,SwissProt:O80605,SwissProt:Q6YK44,TAIR:AT1G09960.1,TAIR:AT1G71890.1,TAIR:AT2G02860.1,TIGRFAMs:TIGR01301,TrEMBL:Q58I04,TrEMBL:Q6L4J3,TrEMBL:Q7Y1Q0;Derives_from=GSCOCT00032200001;Name=Cc11_g13300;Ontology_term=CC_evidence_code:ISS,GO:0005887,GO:0008515,GO:0015770,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Sucrose transport protein SUC3,CC_functional_completeness:complete,CC_gene:SUC3,CC_gene:SUT4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032200001~ Sucrose transport protein SUC3~ SUC3~ complete;original_location=complement(join(1172916..1172972%2C1172649..1172879%2C1171850..1171915%2C1171094..1171192%2C1170949..1171013%2C1170784..1170868%2C1170656..1170689%2C1170381..1170480%2C1170001..1170076%2C1169341..1169694%2C1169078..1169221%2C1168711..1168944%2C1168487..1168550%2C1168357..1168400%2C1168023..1168193));owner=coffea | |
| 70068 chr11 manual_curation exon 30174473 30175088 . + . Parent=GSCOCT00032200001 | |
| 70069 chr11 manual_curation exon 30174266 30174309 . + . Parent=GSCOCT00032200001 | |
| 70070 chr11 manual_curation exon 30174116 30174179 . + . Parent=GSCOCT00032200001 | |
| 70071 chr11 manual_curation exon 30173722 30173955 . + . Parent=GSCOCT00032200001 | |
| 70072 chr11 manual_curation exon 30173445 30173588 . + . Parent=GSCOCT00032200001 | |
| 70073 chr11 manual_curation exon 30172972 30173325 . + . Parent=GSCOCT00032200001 | |
| 70074 chr11 manual_curation exon 30172590 30172665 . + . Parent=GSCOCT00032200001 | |
| 70075 chr11 manual_curation exon 30172186 30172285 . + . Parent=GSCOCT00032200001 | |
| 70076 chr11 manual_curation exon 30171977 30172010 . + . Parent=GSCOCT00032200001 | |
| 70077 chr11 manual_curation exon 30171798 30171882 . + . Parent=GSCOCT00032200001 | |
| 70078 chr11 manual_curation exon 30171653 30171717 . + . Parent=GSCOCT00032200001 | |
| 70079 chr11 manual_curation exon 30171474 30171572 . + . Parent=GSCOCT00032200001 | |
| 70080 chr11 manual_curation exon 30170751 30170816 . + . Parent=GSCOCT00032200001 | |
| 70081 chr11 manual_curation exon 30169787 30170017 . + . Parent=GSCOCT00032200001 | |
| 70082 chr11 manual_curation exon 30169359 30169750 . + . Parent=GSCOCT00032200001 | |
| 70083 chr11 manual_curation CDS 30174473 30174643 . + 0 Parent=GSCOCT00032200001 | |
| 70084 chr11 manual_curation CDS 30174266 30174309 . + 1 Parent=GSCOCT00032200001 | |
| 70085 chr11 manual_curation CDS 30174116 30174179 . + 0 Parent=GSCOCT00032200001 | |
| 70086 chr11 manual_curation CDS 30173722 30173955 . + 0 Parent=GSCOCT00032200001 | |
| 70087 chr11 manual_curation CDS 30173445 30173588 . + 0 Parent=GSCOCT00032200001 | |
| 70088 chr11 manual_curation CDS 30172972 30173325 . + 0 Parent=GSCOCT00032200001 | |
| 70089 chr11 manual_curation CDS 30172590 30172665 . + 2 Parent=GSCOCT00032200001 | |
| 70090 chr11 manual_curation CDS 30172186 30172285 . + 1 Parent=GSCOCT00032200001 | |
| 70091 chr11 manual_curation CDS 30171977 30172010 . + 0 Parent=GSCOCT00032200001 | |
| 70092 chr11 manual_curation CDS 30171798 30171882 . + 2 Parent=GSCOCT00032200001 | |
| 70093 chr11 manual_curation CDS 30171653 30171717 . + 0 Parent=GSCOCT00032200001 | |
| 70094 chr11 manual_curation CDS 30171474 30171572 . + 0 Parent=GSCOCT00032200001 | |
| 70095 chr11 manual_curation CDS 30170751 30170816 . + 0 Parent=GSCOCT00032200001 | |
| 70096 chr11 manual_curation CDS 30169787 30170017 . + 0 Parent=GSCOCT00032200001 | |
| 70097 chr11 manual_curation CDS 30169694 30169750 . + 0 Parent=GSCOCT00032200001 | |
| 70098 chr11 manual_curation gene 30181428 30183461 . + . ID=GSCOCG00032199001;Name=Cc11_g13310 | |
| 70099 chr11 manual_curation mRNA 30181428 30183461 . + . ID=GSCOCT00032199001;Parent=GSCOCG00032199001;Name=Cc11_g13310 | |
| 70100 chr11 manual_curation polypeptide 30181788 30183461 . + . ID=GSCOCP00032199001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR000047,InterPro:IPR001356,InterPro:IPR003106,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR017970,PFAM:PF00046,PFAM:PF02183,PRINTS:PR00031,PROFILE:PS50071,PROSITE:PS00027,SMART:SM00389,SUPERFAMILY:SSF46689,SwissProt:Q8LC03,SwissProt:Q8LFD3,SwissProt:Q8S7W9,TAIR:AT1G26960.1,TAIR:AT1G69780.1,TAIR:AT3G01220.1,TrEMBL:A5AEQ3,TrEMBL:B9S292,TrEMBL:F6HPE2;Derives_from=GSCOCT00032199001;Name=Cc11_g13310;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,GO:0005634,GO:0030528,GO:0043565,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Homeobox-leucine zipper protein ATHB-13,CC_functional_completeness:complete,CC_gene:ATHB-13,CC_gene:ATHB-23,CC_gene:HOX21;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032199001~ Homeobox-leucine zipper protein ATHB-13~ ATHB-13~ complete;original_location=complement(join(1160731..1160878%2C1160244..1160623%2C1159205..1159570));owner=coffea | |
| 70101 chr11 manual_curation exon 30183096 30183461 . + . Parent=GSCOCT00032199001 | |
| 70102 chr11 manual_curation exon 30182043 30182422 . + . Parent=GSCOCT00032199001 | |
| 70103 chr11 manual_curation exon 30181428 30181935 . + . Parent=GSCOCT00032199001 | |
| 70104 chr11 manual_curation CDS 30183096 30183461 . + 0 Parent=GSCOCT00032199001 | |
| 70105 chr11 manual_curation CDS 30182043 30182422 . + 1 Parent=GSCOCT00032199001 | |
| 70106 chr11 manual_curation CDS 30181788 30181935 . + 0 Parent=GSCOCT00032199001 | |
| 70107 chr11 manual_curation gene 30189870 30190466 . + . ID=GSCOCG00032197001;Name=Cc11_g13320 | |
| 70108 chr11 manual_curation mRNA 30189870 30190466 . + . ID=GSCOCT00032197001;Parent=GSCOCG00032197001;Name=Cc11_g13320 | |
| 70109 chr11 manual_curation polypeptide 30189870 30190466 . + . ID=GSCOCP00032197001;Dbxref=InterPro:IPR001395,PANTHER:PTHR11732,TAIR:AT1G14345.1,TrEMBL:B9S293,TrEMBL:F6HPE4,TrEMBL:G7KB58;Derives_from=GSCOCT00032197001;Name=Cc11_g13320;Ontology_term=CC_evidence_code:ISS,GO:0016491,GO:0055114,CC_EC_number:missing_EC_number,PRODUCT:NAD(P)-linked oxidoreductase superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032197001~ NAD(P)-linked oxidoreductase superfamily protein~ unknown_gene~ complete;original_location=complement(1152200..1152796);owner=coffea | |
| 70110 chr11 manual_curation exon 30189870 30190466 . + . Parent=GSCOCT00032197001 | |
| 70111 chr11 manual_curation CDS 30189870 30190466 . + 0 Parent=GSCOCT00032197001 | |
| 70112 chr11 manual_curation gene 30200967 30206028 . + . ID=GSCOCG00032194001;Name=Cc11_g13330 | |
| 70113 chr11 manual_curation mRNA 30200967 30206028 . + . ID=GSCOCT00032194001;Parent=GSCOCG00032194001;Name=Cc11_g13330 | |
| 70114 chr11 manual_curation polypeptide 30201456 30205813 . + . ID=GSCOCP00032194001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001005,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR014778,InterPro:IPR015495,InterPro:IPR017930,PANTHER:PTHR10641,PFAM:PF00249,PROFILE:PS51294,SMART:SM00717,SUPERFAMILY:SSF46689,SwissProt:P10244,SwissProt:P48972,SwissProt:P52551,TAIR:AT1G14350.1,TAIR:AT2G02820.2,TAIR:AT5G58850.1,TrEMBL:D7TNB9,TrEMBL:D9ZJ68,TrEMBL:Q6L4J6;Derives_from=GSCOCT00032194001;Name=Cc11_g13330;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:myb domain protein 88,CC_functional_completeness:complete,CC_gene:mybl2,CC_gene:MYBL2,CC_gene:Mybl2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032194001~ myb domain protein 88~ mybl2~ complete;original_location=complement(join(1141082..1141210%2C1140907..1140953%2C1140758..1140814%2C1140577..1140649%2C1140210..1140265%2C1139910..1140089%2C1139641..1139825%2C1139313..1139458%2C1138827..1138969%2C1138528..1138748%2C1138296..1138441%2C1136853..1136963));owner=coffea | |
| 70115 chr11 manual_curation exon 30205703 30206028 . + . Parent=GSCOCT00032194001 | |
| 70116 chr11 manual_curation exon 30204225 30204370 . + . Parent=GSCOCT00032194001 | |
| 70117 chr11 manual_curation exon 30203918 30204138 . + . Parent=GSCOCT00032194001 | |
| 70118 chr11 manual_curation exon 30203697 30203839 . + . Parent=GSCOCT00032194001 | |
| 70119 chr11 manual_curation exon 30203208 30203353 . + . Parent=GSCOCT00032194001 | |
| 70120 chr11 manual_curation exon 30202841 30203025 . + . Parent=GSCOCT00032194001 | |
| 70121 chr11 manual_curation exon 30202577 30202756 . + . Parent=GSCOCT00032194001 | |
| 70122 chr11 manual_curation exon 30202401 30202456 . + . Parent=GSCOCT00032194001 | |
| 70123 chr11 manual_curation exon 30202017 30202089 . + . Parent=GSCOCT00032194001 | |
| 70124 chr11 manual_curation exon 30201852 30201908 . + . Parent=GSCOCT00032194001 | |
| 70125 chr11 manual_curation exon 30201713 30201759 . + . Parent=GSCOCT00032194001 | |
| 70126 chr11 manual_curation exon 30200967 30201584 . + . Parent=GSCOCT00032194001 | |
| 70127 chr11 manual_curation CDS 30205703 30205813 . + 0 Parent=GSCOCT00032194001 | |
| 70128 chr11 manual_curation CDS 30204225 30204370 . + 1 Parent=GSCOCT00032194001 | |
| 70129 chr11 manual_curation CDS 30203918 30204138 . + 2 Parent=GSCOCT00032194001 | |
| 70130 chr11 manual_curation CDS 30203697 30203839 . + 0 Parent=GSCOCT00032194001 | |
| 70131 chr11 manual_curation CDS 30203208 30203353 . + 1 Parent=GSCOCT00032194001 | |
| 70132 chr11 manual_curation CDS 30202841 30203025 . + 2 Parent=GSCOCT00032194001 | |
| 70133 chr11 manual_curation CDS 30202577 30202756 . + 2 Parent=GSCOCT00032194001 | |
| 70134 chr11 manual_curation CDS 30202401 30202456 . + 0 Parent=GSCOCT00032194001 | |
| 70135 chr11 manual_curation CDS 30202017 30202089 . + 2 Parent=GSCOCT00032194001 | |
| 70136 chr11 manual_curation CDS 30201852 30201908 . + 2 Parent=GSCOCT00032194001 | |
| 70137 chr11 manual_curation CDS 30201713 30201759 . + 0 Parent=GSCOCT00032194001 | |
| 70138 chr11 manual_curation CDS 30201456 30201584 . + 0 Parent=GSCOCT00032194001 | |
| 70139 chr11 manual_curation gene 30208406 30212149 . - . ID=GSCOCG00032192001;Name=Cc11_g13340 | |
| 70140 chr11 manual_curation mRNA 30208406 30212149 . - . ID=GSCOCT00032192001;Parent=GSCOCG00032192001;Name=Cc11_g13340 | |
| 70141 chr11 manual_curation polypeptide 30208635 30211935 . - . ID=GSCOCP00032192001;Dbxref=InterPro:IPR013657,PFAM:PF08449,SwissProt:O64503,SwissProt:Q54I86,SwissProt:Q9M9S6,TAIR:AT1G14360.1,TAIR:AT2G02810.1,TAIR:AT3G46180.1,TrEMBL:C6T7X7,TrEMBL:I1J5M6,TrEMBL:I1JBN2;Derives_from=GSCOCT00032192001;Name=Cc11_g13340;Ontology_term=CC_evidence_code:ISS,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:UDP-galactose/UDP-glucose transporter 3,CC_functional_completeness:complete,CC_gene:UTR3,CC_gene:UTR1,CC_gene:slc35b1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032192001~ UDP-galactose/UDP-glucose transporter 3~ UTR3~ complete;original_location=join(1130731..1130834%2C1131480..1131577%2C1131675..1131805%2C1132298..1132328%2C1132870..1132973%2C1133107..1133228%2C1133623..1134031);owner=coffea | |
| 70142 chr11 manual_curation exon 30211832 30212149 . - . Parent=GSCOCT00032192001 | |
| 70143 chr11 manual_curation exon 30211089 30211186 . - . Parent=GSCOCT00032192001 | |
| 70144 chr11 manual_curation exon 30210861 30210991 . - . Parent=GSCOCT00032192001 | |
| 70145 chr11 manual_curation exon 30210338 30210368 . - . Parent=GSCOCT00032192001 | |
| 70146 chr11 manual_curation exon 30209693 30209796 . - . Parent=GSCOCT00032192001 | |
| 70147 chr11 manual_curation exon 30209438 30209559 . - . Parent=GSCOCT00032192001 | |
| 70148 chr11 manual_curation exon 30208406 30209043 . - . Parent=GSCOCT00032192001 | |
| 70149 chr11 manual_curation CDS 30211832 30211935 . - 0 Parent=GSCOCT00032192001 | |
| 70150 chr11 manual_curation CDS 30211089 30211186 . - 2 Parent=GSCOCT00032192001 | |
| 70151 chr11 manual_curation CDS 30210861 30210991 . - 1 Parent=GSCOCT00032192001 | |
| 70152 chr11 manual_curation CDS 30210338 30210368 . - 0 Parent=GSCOCT00032192001 | |
| 70153 chr11 manual_curation CDS 30209693 30209796 . - 1 Parent=GSCOCT00032192001 | |
| 70154 chr11 manual_curation CDS 30209438 30209559 . - 0 Parent=GSCOCT00032192001 | |
| 70155 chr11 manual_curation CDS 30208635 30209043 . - 2 Parent=GSCOCT00032192001 | |
| 70156 chr11 manual_curation gene 30217957 30221548 . + . ID=GSCOCG00032191001;Name=Cc11_g13350 | |
| 70157 chr11 manual_curation mRNA 30217957 30221548 . + . ID=GSCOCT00032191001;Parent=GSCOCG00032191001;Name=Cc11_g13350 | |
| 70158 chr11 manual_curation polypeptide 30218352 30221227 . + . ID=GSCOCP00032191001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR020635,PFAM:PF07714,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:O49839,SwissProt:O49840,SwissProt:Q06548,TAIR:AT1G14370.1,TAIR:AT1G26970.1,TAIR:AT2G02800.1,TrEMBL:B9HVA3,TrEMBL:D7TNC2,TrEMBL:Q6L4J4;Derives_from=GSCOCT00032191001;Name=Cc11_g13350;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.10.2,PRODUCT:Protein kinase 2B%2C chloroplastic,CC_functional_completeness:complete,CC_gene:APK2B,CC_gene:APK2A,CC_gene:APK1A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032191001~ Protein kinase 2B%2C chloroplastic~ APK2B~ complete;original_location=complement(join(1124251..1124314%2C1122774..1123123%2C1122558..1122693%2C1122216..1122352%2C1121980..1122103%2C1121439..1121887));owner=coffea | |
| 70159 chr11 manual_curation exon 30220779 30221548 . + . Parent=GSCOCT00032191001 | |
| 70160 chr11 manual_curation exon 30220563 30220686 . + . Parent=GSCOCT00032191001 | |
| 70161 chr11 manual_curation exon 30220314 30220450 . + . Parent=GSCOCT00032191001 | |
| 70162 chr11 manual_curation exon 30219973 30220108 . + . Parent=GSCOCT00032191001 | |
| 70163 chr11 manual_curation exon 30219543 30219892 . + . Parent=GSCOCT00032191001 | |
| 70164 chr11 manual_curation exon 30217957 30218415 . + . Parent=GSCOCT00032191001 | |
| 70165 chr11 manual_curation CDS 30220779 30221227 . + 1 Parent=GSCOCT00032191001 | |
| 70166 chr11 manual_curation CDS 30220563 30220686 . + 0 Parent=GSCOCT00032191001 | |
| 70167 chr11 manual_curation CDS 30220314 30220450 . + 1 Parent=GSCOCT00032191001 | |
| 70168 chr11 manual_curation CDS 30219973 30220108 . + 0 Parent=GSCOCT00032191001 | |
| 70169 chr11 manual_curation CDS 30219543 30219892 . + 1 Parent=GSCOCT00032191001 | |
| 70170 chr11 manual_curation CDS 30218352 30218415 . + 0 Parent=GSCOCT00032191001 | |
| 70171 chr11 manual_curation gene 30236170 30242391 . - . ID=GSCOCG00032190001;Name=Cc11_g13360 | |
| 70172 chr11 manual_curation mRNA 30236170 30242391 . - . ID=GSCOCT00032190001;Parent=GSCOCG00032190001;Name=Cc11_g13360 | |
| 70173 chr11 manual_curation polypeptide 30236551 30241042 . - . ID=GSCOCP00032190001;Dbxref=InterPro:IPR000048,PFAM:PF00612,PROFILE:PS50096,SMART:SM00015,SwissProt:Q8L4D8,SwissProt:Q8LPG9,SwissProt:Q9FXI5,TAIR:AT1G18840.1,TAIR:AT1G74690.1,TAIR:AT2G02790.1,TrEMBL:A5BAX7,TrEMBL:D7TND0,TrEMBL:F6H5P3;Derives_from=GSCOCT00032190001;Name=Cc11_g13360;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein IQ-DOMAIN 31,CC_functional_completeness:complete,CC_gene:IQD31,CC_gene:IQD32,CC_gene:IQD14;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032190001~ Putative Protein IQ-DOMAIN 31~ IQD31~ complete;original_location=join(1101624..1101713%2C1102407..1102703%2C1103437..1103637%2C1103881..1103958%2C1104385..1105495%2C1106078..1106115);owner=coffea | |
| 70174 chr11 manual_curation exon 30242260 30242391 . - . Parent=GSCOCT00032190001 | |
| 70175 chr11 manual_curation exon 30241991 30242048 . - . Parent=GSCOCT00032190001 | |
| 70176 chr11 manual_curation exon 30240953 30241066 . - . Parent=GSCOCT00032190001 | |
| 70177 chr11 manual_curation exon 30239963 30240259 . - . Parent=GSCOCT00032190001 | |
| 70178 chr11 manual_curation exon 30239029 30239229 . - . Parent=GSCOCT00032190001 | |
| 70179 chr11 manual_curation exon 30238708 30238785 . - . Parent=GSCOCT00032190001 | |
| 70180 chr11 manual_curation exon 30237171 30238281 . - . Parent=GSCOCT00032190001 | |
| 70181 chr11 manual_curation exon 30236170 30236588 . - . Parent=GSCOCT00032190001 | |
| 70182 chr11 manual_curation CDS 30240953 30241042 . - 0 Parent=GSCOCT00032190001 | |
| 70183 chr11 manual_curation CDS 30239963 30240259 . - 0 Parent=GSCOCT00032190001 | |
| 70184 chr11 manual_curation CDS 30239029 30239229 . - 0 Parent=GSCOCT00032190001 | |
| 70185 chr11 manual_curation CDS 30238708 30238785 . - 0 Parent=GSCOCT00032190001 | |
| 70186 chr11 manual_curation CDS 30237171 30238281 . - 0 Parent=GSCOCT00032190001 | |
| 70187 chr11 manual_curation CDS 30236551 30236588 . - 1 Parent=GSCOCT00032190001 | |
| 70188 chr11 manual_curation gene 30247073 30250437 . - . ID=GSCOCG00032188001;Name=Cc11_g13370 | |
| 70189 chr11 manual_curation mRNA 30247073 30250437 . - . ID=GSCOCT00032188001;Parent=GSCOCG00032188001;Name=Cc11_g13370 | |
| 70190 chr11 manual_curation polypeptide 30247179 30249226 . - . ID=GSCOCP00032188001;Dbxref=InterPro:IPR000644,PFAM:PF00571,PROFILE:PS51371,SMART:SM00116,SwissProt:Q8LBB2,SwissProt:Q9CAR3,TAIR:AT1G69800.2,TAIR:AT3G48530.1,TrEMBL:B9IJG1,TrEMBL:D7TND5,TrEMBL:G7KB20;Derives_from=GSCOCT00032188001;Name=Cc11_g13370;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:SNF1-related protein kinase regulatory subunit gamma-1-like,CC_functional_completeness:complete,CC_gene:CBSCBS2,CC_gene:KING1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032188001~ SNF1-related protein kinase regulatory subunit gamma-1-like~ CBSCBS2~ complete;original_location=join(1093440..1093599%2C1093708..1094150%2C1094470..1094736%2C1094831..1095003%2C1095208..1095487);owner=coffea | |
| 70191 chr11 manual_curation exon 30249067 30250437 . - . Parent=GSCOCT00032188001 | |
| 70192 chr11 manual_curation exon 30248516 30248958 . - . Parent=GSCOCT00032188001 | |
| 70193 chr11 manual_curation exon 30247930 30248196 . - . Parent=GSCOCT00032188001 | |
| 70194 chr11 manual_curation exon 30247663 30247835 . - . Parent=GSCOCT00032188001 | |
| 70195 chr11 manual_curation exon 30247073 30247458 . - . Parent=GSCOCT00032188001 | |
| 70196 chr11 manual_curation CDS 30249067 30249226 . - 0 Parent=GSCOCT00032188001 | |
| 70197 chr11 manual_curation CDS 30248516 30248958 . - 1 Parent=GSCOCT00032188001 | |
| 70198 chr11 manual_curation CDS 30247930 30248196 . - 0 Parent=GSCOCT00032188001 | |
| 70199 chr11 manual_curation CDS 30247663 30247835 . - 0 Parent=GSCOCT00032188001 | |
| 70200 chr11 manual_curation CDS 30247179 30247458 . - 2 Parent=GSCOCT00032188001 | |
| 70201 chr11 manual_curation gene 30251212 30251894 . - . ID=GSCOCG00032187001;Name=Cc11_g13380 | |
| 70202 chr11 manual_curation mRNA 30251212 30251894 . - . ID=GSCOCT00032187001;Parent=GSCOCG00032187001;Name=Cc11_g13380 | |
| 70203 chr11 manual_curation polypeptide 30251212 30251894 . - . ID=GSCOCP00032187001;Dbxref=InterPro:IPR001563,PANTHER:PTHR11802,PFAM:PF00450,TrEMBL:D7SX68,TrEMBL:D7SX69;Derives_from=GSCOCT00032187001;Name=Cc11_g13380;Ontology_term=CC_evidence_code:ISS,GO:0004185,GO:0006508,CC_EC_number:missing_EC_number,PRODUCT:Putative Peptidase S10%2C serine carboxypeptidase,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032187001~ Putative Peptidase S10%2C serine carboxypeptidase~ unknown_gene~ complete;original_location=join(1090772..1090938%2C1091072..1091149%2C1091250..1091454);owner=coffea | |
| 70204 chr11 manual_curation exon 30251728 30251894 . - . Parent=GSCOCT00032187001 | |
| 70205 chr11 manual_curation exon 30251517 30251594 . - . Parent=GSCOCT00032187001 | |
| 70206 chr11 manual_curation exon 30251212 30251416 . - . Parent=GSCOCT00032187001 | |
| 70207 chr11 manual_curation CDS 30251728 30251894 . - 0 Parent=GSCOCT00032187001 | |
| 70208 chr11 manual_curation CDS 30251517 30251594 . - 2 Parent=GSCOCT00032187001 | |
| 70209 chr11 manual_curation CDS 30251212 30251416 . - 2 Parent=GSCOCT00032187001 | |
| 70210 chr11 manual_curation gene 30252616 30257110 . - . ID=GSCOCG00032186001;Name=Cc11_g13390 | |
| 70211 chr11 manual_curation mRNA 30252616 30257110 . - . ID=GSCOCT00032186001;Parent=GSCOCG00032186001;Name=Cc11_g13390 | |
| 70212 chr11 manual_curation polypeptide 30252936 30255739 . - . ID=GSCOCP00032186001;Dbxref=InterPro:IPR009044,InterPro:IPR013742,PFAM:PF08536,SUPERFAMILY:SSF54447,TAIR:AT1G14410.1,TAIR:AT1G71260.1,TAIR:AT2G02740.1,TrEMBL:D7TND7,TrEMBL:D9ZJE7,TrEMBL:Q9LL85;Derives_from=GSCOCT00032186001;Name=Cc11_g13390;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:ssDNA-binding transcriptional regulator,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032186001~ ssDNA-binding transcriptional regulator~ unknown_gene~ complete;original_location=join(1086927..1087170%2C1087647..1087744%2C1087848..1087940%2C1088182..1088276%2C1088650..1088723%2C1088824..1088912%2C1089611..1089730);owner=coffea | |
| 70213 chr11 manual_curation exon 30255496 30257110 . - . Parent=GSCOCT00032186001 | |
| 70214 chr11 manual_curation exon 30254922 30255019 . - . Parent=GSCOCT00032186001 | |
| 70215 chr11 manual_curation exon 30254726 30254818 . - . Parent=GSCOCT00032186001 | |
| 70216 chr11 manual_curation exon 30254390 30254484 . - . Parent=GSCOCT00032186001 | |
| 70217 chr11 manual_curation exon 30253943 30254016 . - . Parent=GSCOCT00032186001 | |
| 70218 chr11 manual_curation exon 30253754 30253842 . - . Parent=GSCOCT00032186001 | |
| 70219 chr11 manual_curation exon 30252616 30253055 . - . Parent=GSCOCT00032186001 | |
| 70220 chr11 manual_curation CDS 30255496 30255739 . - 0 Parent=GSCOCT00032186001 | |
| 70221 chr11 manual_curation CDS 30254922 30255019 . - 1 Parent=GSCOCT00032186001 | |
| 70222 chr11 manual_curation CDS 30254726 30254818 . - 0 Parent=GSCOCT00032186001 | |
| 70223 chr11 manual_curation CDS 30254390 30254484 . - 0 Parent=GSCOCT00032186001 | |
| 70224 chr11 manual_curation CDS 30253943 30254016 . - 2 Parent=GSCOCT00032186001 | |
| 70225 chr11 manual_curation CDS 30253754 30253842 . - 1 Parent=GSCOCT00032186001 | |
| 70226 chr11 manual_curation CDS 30252936 30253055 . - 0 Parent=GSCOCT00032186001 | |
| 70227 chr11 manual_curation gene 30257199 30260943 . + . ID=GSCOCG00032185001;Name=Cc11_g13400 | |
| 70228 chr11 manual_curation mRNA 30257199 30260943 . + . ID=GSCOCT00032185001;Parent=GSCOCG00032185001;Name=Cc11_g13400 | |
| 70229 chr11 manual_curation polypeptide 30257199 30260884 . + . ID=GSCOCP00032185001;Dbxref=InterPro:IPR001878,PFAM:PF00098,PROFILE:PS50158,SMART:SM00343,TAIR:AT5G20220.1,TrEMBL:D7LZZ1,TrEMBL:D7TND8,TrEMBL:I1KXQ7;Derives_from=GSCOCT00032185001;Name=Cc11_g13400;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:zinc knuckle (CCHC-type) family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032185001~ zinc knuckle (CCHC-type) family protein~ unknown_gene~ complete;original_location=complement(join(1085267..1085467%2C1084935..1084993%2C1084436..1084598%2C1084168..1084256%2C1083527..1083659%2C1083228..1083320%2C1082729..1082831%2C1081782..1082146));owner=coffea | |
| 70230 chr11 manual_curation exon 30260520 30260943 . + . Parent=GSCOCT00032185001 | |
| 70231 chr11 manual_curation exon 30259835 30259937 . + . Parent=GSCOCT00032185001 | |
| 70232 chr11 manual_curation exon 30259346 30259438 . + . Parent=GSCOCT00032185001 | |
| 70233 chr11 manual_curation exon 30259007 30259139 . + . Parent=GSCOCT00032185001 | |
| 70234 chr11 manual_curation exon 30258410 30258498 . + . Parent=GSCOCT00032185001 | |
| 70235 chr11 manual_curation exon 30258068 30258230 . + . Parent=GSCOCT00032185001 | |
| 70236 chr11 manual_curation exon 30257673 30257731 . + . Parent=GSCOCT00032185001 | |
| 70237 chr11 manual_curation exon 30257199 30257399 . + . Parent=GSCOCT00032185001 | |
| 70238 chr11 manual_curation CDS 30260520 30260884 . + 1 Parent=GSCOCT00032185001 | |
| 70239 chr11 manual_curation CDS 30259835 30259937 . + 0 Parent=GSCOCT00032185001 | |
| 70240 chr11 manual_curation CDS 30259346 30259438 . + 0 Parent=GSCOCT00032185001 | |
| 70241 chr11 manual_curation CDS 30259007 30259139 . + 2 Parent=GSCOCT00032185001 | |
| 70242 chr11 manual_curation CDS 30258410 30258498 . + 0 Parent=GSCOCT00032185001 | |
| 70243 chr11 manual_curation CDS 30258068 30258230 . + 2 Parent=GSCOCT00032185001 | |
| 70244 chr11 manual_curation CDS 30257673 30257731 . + 0 Parent=GSCOCT00032185001 | |
| 70245 chr11 manual_curation CDS 30257199 30257399 . + 0 Parent=GSCOCT00032185001 | |
| 70246 chr11 manual_curation gene 30261215 30263808 . - . ID=GSCOCG00032184001;Name=Cc11_g13410 | |
| 70247 chr11 manual_curation mRNA 30261215 30263808 . - . ID=GSCOCT00032184001;Parent=GSCOCG00032184001;Name=Cc11_g13410 | |
| 70248 chr11 manual_curation polypeptide 30261965 30263808 . - . ID=GSCOCP00032184001;Dbxref=GENE3D:G3DSA:2.160.20.10,InterPro:IPR002022,InterPro:IPR007524,InterPro:IPR011050,InterPro:IPR012334,InterPro:IPR018082,PFAM:PF00544,PFAM:PF04431,PRINTS:PR00807,SMART:SM00656,SUPERFAMILY:SSF51126,SwissProt:P15722,SwissProt:P40973,SwissProt:Q9M9S2,TAIR:AT1G14420.1,TAIR:AT3G01270.1,TAIR:AT5G15110.1,TrEMBL:B9HJT8,TrEMBL:B9S2B4,TrEMBL:D7TNE2;Derives_from=GSCOCT00032184001;Name=Cc11_g13410;Ontology_term=CC_evidence_code:ISS,GO:0030570,CC_EC_number:4.2.2.2,PRODUCT:Pectate lyase,CC_functional_completeness:complete,CC_gene:LAT59,CC_gene:AT59;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032184001~ Pectate lyase~ LAT59~ complete;original_location=join(1078858..1079081%2C1079251..1079896%2C1080044..1080286%2C1080477..1080701);owner=coffea | |
| 70249 chr11 manual_curation exon 30263585 30263808 . - . Parent=GSCOCT00032184001 | |
| 70250 chr11 manual_curation exon 30262770 30263415 . - . Parent=GSCOCT00032184001 | |
| 70251 chr11 manual_curation exon 30262380 30262622 . - . Parent=GSCOCT00032184001 | |
| 70252 chr11 manual_curation exon 30261215 30262189 . - . Parent=GSCOCT00032184001 | |
| 70253 chr11 manual_curation CDS 30263585 30263808 . - 0 Parent=GSCOCT00032184001 | |
| 70254 chr11 manual_curation CDS 30262770 30263415 . - 2 Parent=GSCOCT00032184001 | |
| 70255 chr11 manual_curation CDS 30262380 30262622 . - 0 Parent=GSCOCT00032184001 | |
| 70256 chr11 manual_curation CDS 30261965 30262189 . - 0 Parent=GSCOCT00032184001 | |
| 70257 chr11 manual_curation gene 30266182 30269567 . + . ID=GSCOCG00032183001;Name=Cc11_g13420 | |
| 70258 chr11 manual_curation mRNA 30266182 30269567 . + . ID=GSCOCT00032183001;Parent=GSCOCG00032183001;Name=Cc11_g13420 | |
| 70259 chr11 manual_curation polypeptide 30266182 30269567 . + . ID=GSCOCP00032183001;Dbxref=GENE3D:G3DSA:3.40.50.200,InterPro:IPR000209,InterPro:IPR010259,InterPro:IPR015500,InterPro:IPR022398,PANTHER:PTHR10795,PFAM:PF00082,PFAM:PF05922,PRINTS:PR00723,PROSITE:PS00138,SUPERFAMILY:SSF52743,SwissProt:O65351,SwissProt:Q39547,SwissProt:Q9LLL8,TAIR:AT3G46850.1,TAIR:AT5G59100.1,TAIR:AT5G59120.1,TrEMBL:B9HPB8,TrEMBL:B9HPB9,TrEMBL:F6GUX0;Derives_from=GSCOCT00032183001;Name=Cc11_g13420;Ontology_term=CC_evidence_code:ISS,GO:0004252,GO:0006508,GO:0042802,GO:0043086,CC_EC_number:3.4.21.25,PRODUCT:Putative Cucumisin,CC_functional_completeness:complete,CC_gene:XSP1,CC_gene:ARA12;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032183001~ Putative Cucumisin~ XSP1~ complete;original_location=complement(join(1076362..1076484%2C1076016..1076107%2C1075832..1075923%2C1075479..1075725%2C1074872..1075364%2C1074614..1074711%2C1074288..1074515%2C1074079..1074190%2C1073759..1073975%2C1073099..1073628));owner=coffea | |
| 70260 chr11 manual_curation exon 30269038 30269567 . + . Parent=GSCOCT00032183001 | |
| 70261 chr11 manual_curation exon 30268691 30268907 . + . Parent=GSCOCT00032183001 | |
| 70262 chr11 manual_curation exon 30268476 30268587 . + . Parent=GSCOCT00032183001 | |
| 70263 chr11 manual_curation exon 30268151 30268378 . + . Parent=GSCOCT00032183001 | |
| 70264 chr11 manual_curation exon 30267955 30268052 . + . Parent=GSCOCT00032183001 | |
| 70265 chr11 manual_curation exon 30267302 30267794 . + . Parent=GSCOCT00032183001 | |
| 70266 chr11 manual_curation exon 30266941 30267187 . + . Parent=GSCOCT00032183001 | |
| 70267 chr11 manual_curation exon 30266743 30266834 . + . Parent=GSCOCT00032183001 | |
| 70268 chr11 manual_curation exon 30266559 30266650 . + . Parent=GSCOCT00032183001 | |
| 70269 chr11 manual_curation exon 30266182 30266304 . + . Parent=GSCOCT00032183001 | |
| 70270 chr11 manual_curation CDS 30269038 30269567 . + 1 Parent=GSCOCT00032183001 | |
| 70271 chr11 manual_curation CDS 30268691 30268907 . + 0 Parent=GSCOCT00032183001 | |
| 70272 chr11 manual_curation CDS 30268476 30268587 . + 2 Parent=GSCOCT00032183001 | |
| 70273 chr11 manual_curation CDS 30268151 30268378 . + 2 Parent=GSCOCT00032183001 | |
| 70274 chr11 manual_curation CDS 30267955 30268052 . + 0 Parent=GSCOCT00032183001 | |
| 70275 chr11 manual_curation CDS 30267302 30267794 . + 2 Parent=GSCOCT00032183001 | |
| 70276 chr11 manual_curation CDS 30266941 30267187 . + 1 Parent=GSCOCT00032183001 | |
| 70277 chr11 manual_curation CDS 30266743 30266834 . + 2 Parent=GSCOCT00032183001 | |
| 70278 chr11 manual_curation CDS 30266559 30266650 . + 0 Parent=GSCOCT00032183001 | |
| 70279 chr11 manual_curation CDS 30266182 30266304 . + 0 Parent=GSCOCT00032183001 | |
| 70280 chr11 manual_curation gene 30273545 30282664 . - . ID=GSCOCG00032181001;Name=Cc11_g13430 | |
| 70281 chr11 manual_curation mRNA 30273545 30282664 . - . ID=GSCOCT00032181001;Parent=GSCOCG00032181001;Name=Cc11_g13430 | |
| 70282 chr11 manual_curation polypeptide 30274121 30282569 . - . ID=GSCOCP00032181001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR006047,InterPro:IPR006589,InterPro:IPR012850,InterPro:IPR013781,InterPro:IPR017853,PFAM:PF00128,PFAM:PF07821,SMART:SM00642,SMART:SM00810,SUPERFAMILY:SSF51445,SwissProt:P17859,SwissProt:P27934,SwissProt:P27937,TAIR:AT1G69830.1,TAIR:AT1G76130.1,TAIR:AT4G25000.1,TrEMBL:B9S2B5,TrEMBL:F6HPF1,TrEMBL:Q5BLY1;Derives_from=GSCOCT00032181001;Name=Cc11_g13430;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004556,GO:0005509,GO:0005975,GO:0043169,CC_EC_number:3.2.1.60,PRODUCT:Putative Alpha-amylase isozyme 3E,CC_functional_completeness:modules,CC_gene:AMY1.4,CC_gene:AMY1.1,CC_gene:AMY1.6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032181001~ Putative Alpha-amylase isozyme 3E~ AMY1.4~ modules;original_location=join(1060097..1060366%2C1060989..1061119%2C1061332..1061392%2C1061479..1061598%2C1061716..1061836%2C1062278..1062633%2C1064224..1064852%2C1065492..1065681%2C1066363..1066469%2C1066643..1066892%2C1067026..1067148%2C1067567..1067734%2C1068387..1068545);owner=coffea | |
| 70283 chr11 manual_curation exon 30282300 30282664 . - . Parent=GSCOCT00032181001 | |
| 70284 chr11 manual_curation exon 30281547 30281677 . - . Parent=GSCOCT00032181001 | |
| 70285 chr11 manual_curation exon 30281274 30281334 . - . Parent=GSCOCT00032181001 | |
| 70286 chr11 manual_curation exon 30281068 30281187 . - . Parent=GSCOCT00032181001 | |
| 70287 chr11 manual_curation exon 30280830 30280950 . - . Parent=GSCOCT00032181001 | |
| 70288 chr11 manual_curation exon 30280033 30280388 . - . Parent=GSCOCT00032181001 | |
| 70289 chr11 manual_curation exon 30277814 30278442 . - . Parent=GSCOCT00032181001 | |
| 70290 chr11 manual_curation exon 30276985 30277174 . - . Parent=GSCOCT00032181001 | |
| 70291 chr11 manual_curation exon 30276197 30276303 . - . Parent=GSCOCT00032181001 | |
| 70292 chr11 manual_curation exon 30275774 30276023 . - . Parent=GSCOCT00032181001 | |
| 70293 chr11 manual_curation exon 30275518 30275640 . - . Parent=GSCOCT00032181001 | |
| 70294 chr11 manual_curation exon 30274932 30275099 . - . Parent=GSCOCT00032181001 | |
| 70295 chr11 manual_curation exon 30273545 30274279 . - . Parent=GSCOCT00032181001 | |
| 70296 chr11 manual_curation CDS 30282300 30282569 . - 0 Parent=GSCOCT00032181001 | |
| 70297 chr11 manual_curation CDS 30281547 30281677 . - 0 Parent=GSCOCT00032181001 | |
| 70298 chr11 manual_curation CDS 30281274 30281334 . - 2 Parent=GSCOCT00032181001 | |
| 70299 chr11 manual_curation CDS 30281068 30281187 . - 0 Parent=GSCOCT00032181001 | |
| 70300 chr11 manual_curation CDS 30280830 30280950 . - 0 Parent=GSCOCT00032181001 | |
| 70301 chr11 manual_curation CDS 30280033 30280388 . - 1 Parent=GSCOCT00032181001 | |
| 70302 chr11 manual_curation CDS 30277814 30278442 . - 0 Parent=GSCOCT00032181001 | |
| 70303 chr11 manual_curation CDS 30276985 30277174 . - 2 Parent=GSCOCT00032181001 | |
| 70304 chr11 manual_curation CDS 30276197 30276303 . - 0 Parent=GSCOCT00032181001 | |
| 70305 chr11 manual_curation CDS 30275774 30276023 . - 2 Parent=GSCOCT00032181001 | |
| 70306 chr11 manual_curation CDS 30275518 30275640 . - 0 Parent=GSCOCT00032181001 | |
| 70307 chr11 manual_curation CDS 30274932 30275099 . - 0 Parent=GSCOCT00032181001 | |
| 70308 chr11 manual_curation CDS 30274121 30274279 . - 0 Parent=GSCOCT00032181001 | |
| 70309 chr11 manual_curation gene 30286115 30291150 . - . ID=GSCOCG00032180001;Name=Cc11_g13440 | |
| 70310 chr11 manual_curation mRNA 30286115 30291150 . - . ID=GSCOCT00032180001;Parent=GSCOCG00032180001;Name=Cc11_g13440 | |
| 70311 chr11 manual_curation polypeptide 30286405 30289730 . - . ID=GSCOCP00032180001;Dbxref=TAIR:AT1G07040.1,TAIR:AT1G27020.1,TAIR:AT1G27030.1,TrEMBL:D7TNE6,TrEMBL:G7K9S8,TrEMBL:G7K9S9;Derives_from=GSCOCT00032180001;Name=Cc11_g13440;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B INVOLVED IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032180001~ unknown protein%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 14 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G27030.1)%3B Has 540 Blast hits to 538 proteins in 187 species: Archae - 0%3B Bacteria - 333%3B Metazoa - 0%3B Fungi - 0%3B Plants - 67%3B Viruses - 0%3B Other Eukaryotes - 140 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(1052936..1053016%2C1053408..1053557%2C1053707..1053922%2C1054612..1054733%2C1054911..1055074%2C1055915..1056069%2C1056163..1056261);owner=coffea | |
| 70312 chr11 manual_curation exon 30289650 30291150 . - . Parent=GSCOCT00032180001 | |
| 70313 chr11 manual_curation exon 30289109 30289258 . - . Parent=GSCOCT00032180001 | |
| 70314 chr11 manual_curation exon 30288744 30288959 . - . Parent=GSCOCT00032180001 | |
| 70315 chr11 manual_curation exon 30287933 30288054 . - . Parent=GSCOCT00032180001 | |
| 70316 chr11 manual_curation exon 30287592 30287755 . - . Parent=GSCOCT00032180001 | |
| 70317 chr11 manual_curation exon 30286597 30286751 . - . Parent=GSCOCT00032180001 | |
| 70318 chr11 manual_curation exon 30286115 30286503 . - . Parent=GSCOCT00032180001 | |
| 70319 chr11 manual_curation CDS 30289650 30289730 . - 0 Parent=GSCOCT00032180001 | |
| 70320 chr11 manual_curation CDS 30289109 30289258 . - 0 Parent=GSCOCT00032180001 | |
| 70321 chr11 manual_curation CDS 30288744 30288959 . - 0 Parent=GSCOCT00032180001 | |
| 70322 chr11 manual_curation CDS 30287933 30288054 . - 0 Parent=GSCOCT00032180001 | |
| 70323 chr11 manual_curation CDS 30287592 30287755 . - 2 Parent=GSCOCT00032180001 | |
| 70324 chr11 manual_curation CDS 30286597 30286751 . - 1 Parent=GSCOCT00032180001 | |
| 70325 chr11 manual_curation CDS 30286405 30286503 . - 0 Parent=GSCOCT00032180001 | |
| 70326 chr11 manual_curation gene 30291207 30294288 . + . ID=GSCOCG00032179001;Name=Cc11_g13450 | |
| 70327 chr11 manual_curation mRNA 30291207 30294288 . + . ID=GSCOCT00032179001;Parent=GSCOCG00032179001;Name=Cc11_g13450 | |
| 70328 chr11 manual_curation polypeptide 30291605 30294219 . + . ID=GSCOCP00032179001;Dbxref=InterPro:IPR001107,InterPro:IPR001972,PANTHER:PTHR10264,PFAM:PF01145,SMART:SM00244,SwissProt:Q9CAR7,SwissProt:Q9FM19,SwissProt:Q9SRH6,TAIR:AT1G69840.1,TAIR:AT3G01290.1,TAIR:AT5G62740.1,TrEMBL:A9PK28,TrEMBL:B9S2B7,TrEMBL:Q6UNT3;Derives_from=GSCOCT00032179001;Name=Cc11_g13450;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Hypersensitive-induced response protein 1,CC_functional_completeness:complete,CC_gene:HIR1,CC_gene:HIR2,CC_gene:HIR3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032179001~ Hypersensitive-induced response protein 1~ HIR1~ complete;original_location=complement(join(1051004..1051061%2C1050709..1050783%2C1050386..1050585%2C1049898..1050018%2C1049356..1049453%2C1049175..1049271%2C1048447..1048808));owner=coffea | |
| 70329 chr11 manual_curation exon 30293858 30294288 . + . Parent=GSCOCT00032179001 | |
| 70330 chr11 manual_curation exon 30293395 30293491 . + . Parent=GSCOCT00032179001 | |
| 70331 chr11 manual_curation exon 30293213 30293310 . + . Parent=GSCOCT00032179001 | |
| 70332 chr11 manual_curation exon 30292648 30292768 . + . Parent=GSCOCT00032179001 | |
| 70333 chr11 manual_curation exon 30292081 30292280 . + . Parent=GSCOCT00032179001 | |
| 70334 chr11 manual_curation exon 30291883 30291957 . + . Parent=GSCOCT00032179001 | |
| 70335 chr11 manual_curation exon 30291207 30291662 . + . Parent=GSCOCT00032179001 | |
| 70336 chr11 manual_curation CDS 30293858 30294219 . + 1 Parent=GSCOCT00032179001 | |
| 70337 chr11 manual_curation CDS 30293395 30293491 . + 0 Parent=GSCOCT00032179001 | |
| 70338 chr11 manual_curation CDS 30293213 30293310 . + 1 Parent=GSCOCT00032179001 | |
| 70339 chr11 manual_curation CDS 30292648 30292768 . + 0 Parent=GSCOCT00032179001 | |
| 70340 chr11 manual_curation CDS 30292081 30292280 . + 1 Parent=GSCOCT00032179001 | |
| 70341 chr11 manual_curation CDS 30291883 30291957 . + 1 Parent=GSCOCT00032179001 | |
| 70342 chr11 manual_curation CDS 30291605 30291662 . + 0 Parent=GSCOCT00032179001 | |
| 70343 chr11 manual_curation gene 30294358 30298911 . - . ID=GSCOCG00032178001;Name=Cc11_g13460 | |
| 70344 chr11 manual_curation mRNA 30294358 30298911 . - . ID=GSCOCT00032178001;Parent=GSCOCG00032178001;Name=Cc11_g13460 | |
| 70345 chr11 manual_curation polypeptide 30295283 30298641 . - . ID=GSCOCP00032178001;Dbxref=InterPro:IPR001925,PFAM:PF01459,PROSITE:PS00558,SwissProt:P42054,SwissProt:P42055,SwissProt:P42056,TAIR:AT3G01280.1,TAIR:AT5G15090.1,TAIR:AT5G57490.1,TrEMBL:A9CM21,TrEMBL:A9PD04,TrEMBL:F6HPF2;Derives_from=GSCOCT00032178001;Name=Cc11_g13460;Ontology_term=CC_evidence_code:ISS,GO:0005741,GO:0006820,GO:0008308,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Mitochondrial outer membrane protein porin of 36 kDa,CC_functional_completeness:complete,CC_gene:POR1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032178001~ Mitochondrial outer membrane protein porin of 36 kDa~ POR1~ complete;original_location=join(1044025..1044073%2C1044175..1044242%2C1045438..1045548%2C1046425..1046511%2C1046609..1046817%2C1047077..1047383);owner=coffea | |
| 70346 chr11 manual_curation exon 30298593 30298911 . - . Parent=GSCOCT00032178001 | |
| 70347 chr11 manual_curation exon 30298424 30298491 . - . Parent=GSCOCT00032178001 | |
| 70348 chr11 manual_curation exon 30297118 30297228 . - . Parent=GSCOCT00032178001 | |
| 70349 chr11 manual_curation exon 30296155 30296241 . - . Parent=GSCOCT00032178001 | |
| 70350 chr11 manual_curation exon 30295849 30296057 . - . Parent=GSCOCT00032178001 | |
| 70351 chr11 manual_curation exon 30294358 30295589 . - . Parent=GSCOCT00032178001 | |
| 70352 chr11 manual_curation CDS 30298593 30298641 . - 0 Parent=GSCOCT00032178001 | |
| 70353 chr11 manual_curation CDS 30298424 30298491 . - 1 Parent=GSCOCT00032178001 | |
| 70354 chr11 manual_curation CDS 30297118 30297228 . - 0 Parent=GSCOCT00032178001 | |
| 70355 chr11 manual_curation CDS 30296155 30296241 . - 0 Parent=GSCOCT00032178001 | |
| 70356 chr11 manual_curation CDS 30295849 30296057 . - 0 Parent=GSCOCT00032178001 | |
| 70357 chr11 manual_curation CDS 30295283 30295589 . - 2 Parent=GSCOCT00032178001 | |
| 70358 chr11 manual_curation gene 30300985 30305354 . - . ID=GSCOCG00032177001;Name=Cc11_g13470 | |
| 70359 chr11 manual_curation mRNA 30300985 30305354 . - . ID=GSCOCT00032177001;Parent=GSCOCG00032177001;Name=Cc11_g13470 | |
| 70360 chr11 manual_curation polypeptide 30301443 30305222 . - . ID=GSCOCP00032177001;Dbxref=InterPro:IPR001925,PFAM:PF01459,PROSITE:PS00558,SwissProt:P42054,SwissProt:P42055,SwissProt:P42056,TAIR:AT3G01280.1,TAIR:AT5G15090.1,TAIR:AT5G57490.1,TrEMBL:A9CM21,TrEMBL:B9S2B6,TrEMBL:F6HPF2;Derives_from=GSCOCT00032177001;Name=Cc11_g13470;Ontology_term=CC_evidence_code:ISS,GO:0005741,GO:0006820,GO:0008308,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Mitochondrial outer membrane protein porin of 36 kDa,CC_functional_completeness:complete,CC_gene:POR1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032177001~ Mitochondrial outer membrane protein porin of 36 kDa~ POR1~ complete;original_location=join(1037444..1037492%2C1037591..1037658%2C1039004..1039114%2C1039824..1039910%2C1040009..1040217%2C1040917..1041223);owner=coffea | |
| 70361 chr11 manual_curation exon 30305174 30305354 . - . Parent=GSCOCT00032177001 | |
| 70362 chr11 manual_curation exon 30305008 30305075 . - . Parent=GSCOCT00032177001 | |
| 70363 chr11 manual_curation exon 30303552 30303662 . - . Parent=GSCOCT00032177001 | |
| 70364 chr11 manual_curation exon 30302756 30302842 . - . Parent=GSCOCT00032177001 | |
| 70365 chr11 manual_curation exon 30302449 30302657 . - . Parent=GSCOCT00032177001 | |
| 70366 chr11 manual_curation exon 30300985 30301749 . - . Parent=GSCOCT00032177001 | |
| 70367 chr11 manual_curation CDS 30305174 30305222 . - 0 Parent=GSCOCT00032177001 | |
| 70368 chr11 manual_curation CDS 30305008 30305075 . - 1 Parent=GSCOCT00032177001 | |
| 70369 chr11 manual_curation CDS 30303552 30303662 . - 0 Parent=GSCOCT00032177001 | |
| 70370 chr11 manual_curation CDS 30302756 30302842 . - 0 Parent=GSCOCT00032177001 | |
| 70371 chr11 manual_curation CDS 30302449 30302657 . - 0 Parent=GSCOCT00032177001 | |
| 70372 chr11 manual_curation CDS 30301443 30301749 . - 2 Parent=GSCOCT00032177001 | |
| 70373 chr11 manual_curation gene 30307835 30314375 . - . ID=GSCOCG00032176001;Name=Cc11_g13480 | |
| 70374 chr11 manual_curation mRNA 30307835 30314375 . - . ID=GSCOCT00032176001;Parent=GSCOCG00032176001;Name=Cc11_g13480 | |
| 70375 chr11 manual_curation polypeptide 30308288 30313691 . - . ID=GSCOCP00032176001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q06548,SwissProt:Q9LFP7,SwissProt:Q9SRH7,TAIR:AT3G01300.1,TAIR:AT3G28690.2,TAIR:AT5G15080.1,TrEMBL:B9S2B9,TrEMBL:D7TNE7,TrEMBL:Q5XWQ1;Derives_from=GSCOCT00032176001;Name=Cc11_g13480;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Probable receptor-like protein kinase At5g15080,CC_functional_completeness:complete,CC_gene:At5g15080,CC_gene:At3g01300,CC_gene:APK1A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032176001~ Probable receptor-like protein kinase At5g15080~ At5g15080~ complete;original_location=join(1028975..1029170%2C1030635..1030969%2C1031068..1031203%2C1032443..1032579%2C1033029..1033152%2C1033858..1034378);owner=coffea | |
| 70376 chr11 manual_curation exon 30313496 30314375 . - . Parent=GSCOCT00032176001 | |
| 70377 chr11 manual_curation exon 30311697 30312031 . - . Parent=GSCOCT00032176001 | |
| 70378 chr11 manual_curation exon 30311463 30311598 . - . Parent=GSCOCT00032176001 | |
| 70379 chr11 manual_curation exon 30310087 30310223 . - . Parent=GSCOCT00032176001 | |
| 70380 chr11 manual_curation exon 30309514 30309637 . - . Parent=GSCOCT00032176001 | |
| 70381 chr11 manual_curation exon 30307835 30308808 . - . Parent=GSCOCT00032176001 | |
| 70382 chr11 manual_curation CDS 30313496 30313691 . - 0 Parent=GSCOCT00032176001 | |
| 70383 chr11 manual_curation CDS 30311697 30312031 . - 1 Parent=GSCOCT00032176001 | |
| 70384 chr11 manual_curation CDS 30311463 30311598 . - 0 Parent=GSCOCT00032176001 | |
| 70385 chr11 manual_curation CDS 30310087 30310223 . - 1 Parent=GSCOCT00032176001 | |
| 70386 chr11 manual_curation CDS 30309514 30309637 . - 0 Parent=GSCOCT00032176001 | |
| 70387 chr11 manual_curation CDS 30308288 30308808 . - 1 Parent=GSCOCT00032176001 | |
| 70388 chr11 manual_curation gene 30317805 30323508 . - . ID=GSCOCG00032175001;Name=Cc11_g13490 | |
| 70389 chr11 manual_curation mRNA 30317805 30323508 . - . ID=GSCOCT00032175001;Parent=GSCOCG00032175001;Name=Cc11_g13490 | |
| 70390 chr11 manual_curation polypeptide 30318005 30322697 . - . ID=GSCOCP00032175001;Dbxref=TAIR:AT3G17900.1,TrEMBL:B9HMW1,TrEMBL:B9S2C0,TrEMBL:F6HJ55;Derives_from=GSCOCT00032175001;Name=Cc11_g13490;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032175001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B Has 45 Blast hits to 44 proteins in 14 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2%3B Fungi - 2%3B Plants - 39%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(1019969..1020263%2C1020626..1020703%2C1020861..1021429%2C1021685..1022317%2C1022547..1022701%2C1022958..1023169%2C1023262..1023395%2C1023477..1023823%2C1023940..1024043%2C1024591..1024661);owner=coffea | |
| 70391 chr11 manual_curation exon 30323282 30323508 . - . Parent=GSCOCT00032175001 | |
| 70392 chr11 manual_curation exon 30322403 30322745 . - . Parent=GSCOCT00032175001 | |
| 70393 chr11 manual_curation exon 30321963 30322040 . - . Parent=GSCOCT00032175001 | |
| 70394 chr11 manual_curation exon 30321237 30321805 . - . Parent=GSCOCT00032175001 | |
| 70395 chr11 manual_curation exon 30320349 30320981 . - . Parent=GSCOCT00032175001 | |
| 70396 chr11 manual_curation exon 30319965 30320119 . - . Parent=GSCOCT00032175001 | |
| 70397 chr11 manual_curation exon 30319497 30319708 . - . Parent=GSCOCT00032175001 | |
| 70398 chr11 manual_curation exon 30319271 30319404 . - . Parent=GSCOCT00032175001 | |
| 70399 chr11 manual_curation exon 30318843 30319189 . - . Parent=GSCOCT00032175001 | |
| 70400 chr11 manual_curation exon 30318623 30318726 . - . Parent=GSCOCT00032175001 | |
| 70401 chr11 manual_curation exon 30317805 30318075 . - . Parent=GSCOCT00032175001 | |
| 70402 chr11 manual_curation CDS 30322403 30322697 . - 0 Parent=GSCOCT00032175001 | |
| 70403 chr11 manual_curation CDS 30321963 30322040 . - 1 Parent=GSCOCT00032175001 | |
| 70404 chr11 manual_curation CDS 30321237 30321805 . - 1 Parent=GSCOCT00032175001 | |
| 70405 chr11 manual_curation CDS 30320349 30320981 . - 0 Parent=GSCOCT00032175001 | |
| 70406 chr11 manual_curation CDS 30319965 30320119 . - 0 Parent=GSCOCT00032175001 | |
| 70407 chr11 manual_curation CDS 30319497 30319708 . - 2 Parent=GSCOCT00032175001 | |
| 70408 chr11 manual_curation CDS 30319271 30319404 . - 1 Parent=GSCOCT00032175001 | |
| 70409 chr11 manual_curation CDS 30318843 30319189 . - 0 Parent=GSCOCT00032175001 | |
| 70410 chr11 manual_curation CDS 30318623 30318726 . - 2 Parent=GSCOCT00032175001 | |
| 70411 chr11 manual_curation CDS 30318005 30318075 . - 1 Parent=GSCOCT00032175001 | |
| 70412 chr11 manual_curation gene 30329920 30334734 . + . ID=GSCOCG00032174001;Name=Cc11_g13500 | |
| 70413 chr11 manual_curation mRNA 30329920 30334734 . + . ID=GSCOCT00032174001;Parent=GSCOCG00032174001;Name=Cc11_g13500 | |
| 70414 chr11 manual_curation polypeptide 30330646 30334304 . + . ID=GSCOCP00032174001;Dbxref=InterPro:IPR000014,InterPro:IPR001610,InterPro:IPR013767,PFAM:PF00989,PROFILE:PS50112,SMART:SM00086,SMART:SM00091,SwissProt:O48963,SwissProt:O64511,SwissProt:P93025,TAIR:AT2G02710.1,TAIR:AT3G45780.1,TAIR:AT5G58140.2,TIGRFAMs:TIGR00229,TrEMBL:B9HTE0,TrEMBL:E3WH16,TrEMBL:F6HPF4;Derives_from=GSCOCT00032174001;Name=Cc11_g13500;Ontology_term=CC_evidence_code:ISS,GO:0004871,GO:0007165,CC_EC_number:missing_EC_number,PRODUCT:Protein TWIN LOV 1,CC_functional_completeness:complete,CC_gene:TLP1,CC_gene:PHOT2,CC_gene:PHOT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032174001~ Protein TWIN LOV 1~ TLP1~ complete;original_location=complement(join(1011468..1012020%2C1010966..1011176%2C1010783..1010847%2C1010560..1010639%2C1010378..1010433%2C1010198..1010261%2C1008362..1008508));owner=coffea | |
| 70415 chr11 manual_curation exon 30334158 30334734 . + . Parent=GSCOCT00032174001 | |
| 70416 chr11 manual_curation exon 30332405 30332468 . + . Parent=GSCOCT00032174001 | |
| 70417 chr11 manual_curation exon 30332233 30332288 . + . Parent=GSCOCT00032174001 | |
| 70418 chr11 manual_curation exon 30332027 30332106 . + . Parent=GSCOCT00032174001 | |
| 70419 chr11 manual_curation exon 30331819 30331883 . + . Parent=GSCOCT00032174001 | |
| 70420 chr11 manual_curation exon 30331490 30331700 . + . Parent=GSCOCT00032174001 | |
| 70421 chr11 manual_curation exon 30329920 30331198 . + . Parent=GSCOCT00032174001 | |
| 70422 chr11 manual_curation CDS 30334158 30334304 . + 0 Parent=GSCOCT00032174001 | |
| 70423 chr11 manual_curation CDS 30332405 30332468 . + 2 Parent=GSCOCT00032174001 | |
| 70424 chr11 manual_curation CDS 30332233 30332288 . + 0 Parent=GSCOCT00032174001 | |
| 70425 chr11 manual_curation CDS 30332027 30332106 . + 1 Parent=GSCOCT00032174001 | |
| 70426 chr11 manual_curation CDS 30331819 30331883 . + 2 Parent=GSCOCT00032174001 | |
| 70427 chr11 manual_curation CDS 30331490 30331700 . + 1 Parent=GSCOCT00032174001 | |
| 70428 chr11 manual_curation CDS 30330646 30331198 . + 0 Parent=GSCOCT00032174001 | |
| 70429 chr11 manual_curation gene 30335652 30337199 . + . ID=GSCOCG00032173001;Name=Cc11_g13510 | |
| 70430 chr11 manual_curation mRNA 30335652 30337199 . + . ID=GSCOCT00032173001;Parent=GSCOCG00032173001;Name=Cc11_g13510 | |
| 70431 chr11 manual_curation polypeptide 30335652 30337199 . + . ID=GSCOCP00032173001;Dbxref=GENE3D:G3DSA:2.130.10.80,GENE3D:G3DSA:2.60.40.10,InterPro:IPR009880,InterPro:IPR011043,InterPro:IPR013783,InterPro:IPR014756,InterPro:IPR015202,InterPro:IPR015916,PFAM:PF07250,PFAM:PF09118,SUPERFAMILY:SSF50965,SUPERFAMILY:SSF81296,TAIR:AT1G14430.1,TAIR:AT1G19900.1,TAIR:AT3G57620.1,TrEMBL:B9HMV9,TrEMBL:B9S2C3,TrEMBL:F6HPF5;Derives_from=GSCOCT00032173001;Name=Cc11_g13510;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:glyoxal oxidase-related protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032173001~ glyoxal oxidase-related protein~ unknown_gene~ complete;original_location=complement(1005467..1007014);owner=coffea | |
| 70432 chr11 manual_curation exon 30335652 30337199 . + . Parent=GSCOCT00032173001 | |
| 70433 chr11 manual_curation CDS 30335652 30337199 . + 0 Parent=GSCOCT00032173001 | |
| 70434 chr11 manual_curation gene 30342104 30343669 . + . ID=GSCOCG00032171001;Name=Cc11_g13520 | |
| 70435 chr11 manual_curation mRNA 30342104 30343669 . + . ID=GSCOCT00032171001;Parent=GSCOCG00032171001;Name=Cc11_g13520 | |
| 70436 chr11 manual_curation polypeptide 30342104 30343669 . + . ID=GSCOCP00032171001;Dbxref=GENE3D:G3DSA:2.130.10.80,GENE3D:G3DSA:2.60.40.10,InterPro:IPR009880,InterPro:IPR011043,InterPro:IPR013783,InterPro:IPR014756,InterPro:IPR015202,InterPro:IPR015916,PFAM:PF07250,PFAM:PF09118,SUPERFAMILY:SSF50965,SUPERFAMILY:SSF81296,TAIR:AT1G14430.1,TAIR:AT1G19900.1,TAIR:AT3G57620.1,TrEMBL:B9HMV9,TrEMBL:F6HPF5,TrEMBL:I1JBR5;Derives_from=GSCOCT00032171001;Name=Cc11_g13520;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:glyoxal oxidase-related protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032171001~ glyoxal oxidase-related protein~ unknown_gene~ complete;original_location=complement(998997..1000562);owner=coffea | |
| 70437 chr11 manual_curation exon 30342104 30343669 . + . Parent=GSCOCT00032171001 | |
| 70438 chr11 manual_curation CDS 30342104 30343669 . + 0 Parent=GSCOCT00032171001 | |
| 70439 chr11 manual_curation gene 30346719 30352971 . - . ID=GSCOCG00032170001;Name=Cc11_g13530 | |
| 70440 chr11 manual_curation mRNA 30346719 30352971 . - . ID=GSCOCT00032170001;Parent=GSCOCG00032170001;Name=Cc11_g13530 | |
| 70441 chr11 manual_curation polypeptide 30346951 30352971 . - . ID=GSCOCP00032170001;Dbxref=InterPro:IPR000109,InterPro:IPR016196,PFAM:PF00854,SUPERFAMILY:SSF103473,SwissProt:Q8H157,SwissProt:Q8VYE4,SwissProt:Q9FM20,TAIR:AT1G27040.1,TAIR:AT1G69850.1,TAIR:AT5G62730.1,TrEMBL:B9HMV8,TrEMBL:I1J5K4,TrEMBL:I1JBR6;Derives_from=GSCOCT00032170001;Name=Cc11_g13530;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006857,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Nitrate transporter 1.2,CC_functional_completeness:complete,CC_gene:NRT1.2,CC_gene:At1g27040,CC_gene:At5g62730;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032170001~ Nitrate transporter 1.2~ NRT1.2~ complete;original_location=join(989695..989826%2C989957..990139%2C990232..990340%2C990700..990917%2C994038..994478%2C994738..995715);owner=coffea | |
| 70442 chr11 manual_curation exon 30352840 30352971 . - . Parent=GSCOCT00032170001 | |
| 70443 chr11 manual_curation exon 30352527 30352709 . - . Parent=GSCOCT00032170001 | |
| 70444 chr11 manual_curation exon 30352326 30352434 . - . Parent=GSCOCT00032170001 | |
| 70445 chr11 manual_curation exon 30351749 30351966 . - . Parent=GSCOCT00032170001 | |
| 70446 chr11 manual_curation exon 30348188 30348628 . - . Parent=GSCOCT00032170001 | |
| 70447 chr11 manual_curation exon 30346719 30347928 . - . Parent=GSCOCT00032170001 | |
| 70448 chr11 manual_curation CDS 30352840 30352971 . - 0 Parent=GSCOCT00032170001 | |
| 70449 chr11 manual_curation CDS 30352527 30352709 . - 0 Parent=GSCOCT00032170001 | |
| 70450 chr11 manual_curation CDS 30352326 30352434 . - 0 Parent=GSCOCT00032170001 | |
| 70451 chr11 manual_curation CDS 30351749 30351966 . - 1 Parent=GSCOCT00032170001 | |
| 70452 chr11 manual_curation CDS 30348188 30348628 . - 0 Parent=GSCOCT00032170001 | |
| 70453 chr11 manual_curation CDS 30346951 30347928 . - 0 Parent=GSCOCT00032170001 | |
| 70454 chr11 manual_curation gene 30370787 30373444 . + . ID=GSCOCG00032169001;Name=Cc11_g13540 | |
| 70455 chr11 manual_curation mRNA 30370787 30373444 . + . ID=GSCOCT00032169001;Parent=GSCOCG00032169001;Name=Cc11_g13540 | |
| 70456 chr11 manual_curation polypeptide 30371424 30373147 . + . ID=GSCOCP00032169001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001356,InterPro:IPR003106,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR017970,PFAM:PF00046,PFAM:PF02183,PROFILE:PS50071,PROSITE:PS00027,SMART:SM00389,SUPERFAMILY:SSF46689,SwissProt:A2X980,SwissProt:Q02283,SwissProt:Q6YWR4,TAIR:AT2G22430.1,TAIR:AT3G01470.1,TAIR:AT4G40060.1,TrEMBL:D7TNF1,TrEMBL:I1J5K2,TrEMBL:Q93XA4;Derives_from=GSCOCT00032169001;Name=Cc11_g13540;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,GO:0005634,GO:0030528,GO:0043565,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Homeodomain leucine zipper protein HDZ2,CC_functional_completeness:complete,CC_gene:HAT5,CC_gene:HOX16;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032169001~ Homeodomain leucine zipper protein HDZ2~ HAT5~ complete;original_location=complement(join(971113..971242%2C970063..970457%2C969519..969965));owner=coffea | |
| 70457 chr11 manual_curation exon 30372701 30373444 . + . Parent=GSCOCT00032169001 | |
| 70458 chr11 manual_curation exon 30372209 30372603 . + . Parent=GSCOCT00032169001 | |
| 70459 chr11 manual_curation exon 30370787 30371553 . + . Parent=GSCOCT00032169001 | |
| 70460 chr11 manual_curation CDS 30372701 30373147 . + 0 Parent=GSCOCT00032169001 | |
| 70461 chr11 manual_curation CDS 30372209 30372603 . + 1 Parent=GSCOCT00032169001 | |
| 70462 chr11 manual_curation CDS 30371424 30371553 . + 0 Parent=GSCOCT00032169001 | |
| 70463 chr11 manual_curation gene 30380370 30382859 . - . ID=GSCOCG00032168001;Name=Cc11_g13550 | |
| 70464 chr11 manual_curation mRNA 30380370 30382859 . - . ID=GSCOCT00032168001;Parent=GSCOCG00032168001;Name=Cc11_g13550 | |
| 70465 chr11 manual_curation polypeptide 30380645 30382300 . - . ID=GSCOCP00032168001;Dbxref=InterPro:IPR009577,PFAM:PF06695,TAIR:AT2G02590.1,TrEMBL:B9HMV6,TrEMBL:B9S2C9,TrEMBL:D7TNF2;Derives_from=GSCOCT00032168001;Name=Cc11_g13550;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032168001~ FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Putative small multi-drug export (InterPro:IPR009577)%3B Has 405 Blast hits to 405 proteins in 185 species: Archae - 65%3B Bacteria - 295%3B Metazoa - 0%3B Fungi - 0%3B Plants - 23%3B Viruses - 0%3B Other Eukaryotes - 22 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(960366..960910%2C961607..962021);owner=coffea | |
| 70466 chr11 manual_curation exon 30381756 30382859 . - . Parent=GSCOCT00032168001 | |
| 70467 chr11 manual_curation exon 30380370 30381059 . - . Parent=GSCOCT00032168001 | |
| 70468 chr11 manual_curation CDS 30381756 30382300 . - 0 Parent=GSCOCT00032168001 | |
| 70469 chr11 manual_curation CDS 30380645 30381059 . - 2 Parent=GSCOCT00032168001 | |
| 70470 chr11 manual_curation gene 30383627 30385828 . - . ID=GSCOCG00032167001;Name=Cc11_g13560 | |
| 70471 chr11 manual_curation mRNA 30383627 30385828 . - . ID=GSCOCT00032167001;Parent=GSCOCG00032167001;Name=Cc11_g13560 | |
| 70472 chr11 manual_curation polypeptide 30384290 30385510 . - . ID=GSCOCP00032167001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR012677,PFAM:PF00076,PROFILE:PS50102,SMART:SM00360,SwissProt:P0CJ66,TAIR:AT1G27050.1,TrEMBL:B9S2D0,TrEMBL:G7K9R0,TrEMBL:I1J5K1;Derives_from=GSCOCT00032167001;Name=Cc11_g13560;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized protein At1g27050,CC_functional_completeness:complete,CC_gene:At1g27050;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032167001~ Putative Uncharacterized protein At1g27050~ At1g27050~ complete;original_location=join(957156..957509%2C958068..958376);owner=coffea | |
| 70473 chr11 manual_curation exon 30385157 30385828 . - . Parent=GSCOCT00032167001 | |
| 70474 chr11 manual_curation exon 30383627 30384598 . - . Parent=GSCOCT00032167001 | |
| 70475 chr11 manual_curation CDS 30385157 30385510 . - 0 Parent=GSCOCT00032167001 | |
| 70476 chr11 manual_curation CDS 30384290 30384598 . - 0 Parent=GSCOCT00032167001 | |
| 70477 chr11 manual_curation gene 30389308 30392615 . + . ID=GSCOCG00032166001;Name=Cc11_g13570 | |
| 70478 chr11 manual_curation mRNA 30389308 30392615 . + . ID=GSCOCT00032166001;Parent=GSCOCG00032166001;Name=Cc11_g13570 | |
| 70479 chr11 manual_curation polypeptide 30389308 30392018 . + . ID=GSCOCP00032166001;Dbxref=GENE3D:G3DSA:2.130.10.30,InterPro:IPR000408,InterPro:IPR009091,PFAM:PF00415,PRINTS:PR00633,PROFILE:PS50012,PROSITE:PS00626,SUPERFAMILY:SSF50985,SwissProt:O95714,SwissProt:Q15751,SwissProt:Q4U2R1,TAIR:AT1G27060.1,TAIR:AT5G19420.2,TAIR:AT5G42140.1,TrEMBL:B9IFL9,TrEMBL:B9S2D2,TrEMBL:F6HPF8;Derives_from=GSCOCT00032166001;Name=Cc11_g13570;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable E3 ubiquitin-protein ligase HERC1,CC_functional_completeness:fragment,CC_gene:HERC1,CC_gene:Herc2,CC_gene:HERC2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032166001~ Putative Probable E3 ubiquitin-protein ligase HERC1~ HERC1~ fragment;original_location=complement(join(953121..953358%2C952891..953043%2C952279..952437%2C951955..952122%2C951644..951775%2C951455..951532%2C950898..951026%2C950648..950841));owner=coffea | |
| 70480 chr11 manual_curation exon 30391825 30392615 . + . Parent=GSCOCT00032166001 | |
| 70481 chr11 manual_curation exon 30391640 30391768 . + . Parent=GSCOCT00032166001 | |
| 70482 chr11 manual_curation exon 30391134 30391211 . + . Parent=GSCOCT00032166001 | |
| 70483 chr11 manual_curation exon 30390891 30391022 . + . Parent=GSCOCT00032166001 | |
| 70484 chr11 manual_curation exon 30390544 30390711 . + . Parent=GSCOCT00032166001 | |
| 70485 chr11 manual_curation exon 30390229 30390387 . + . Parent=GSCOCT00032166001 | |
| 70486 chr11 manual_curation exon 30389623 30389775 . + . Parent=GSCOCT00032166001 | |
| 70487 chr11 manual_curation exon 30389308 30389545 . + . Parent=GSCOCT00032166001 | |
| 70488 chr11 manual_curation CDS 30391825 30392018 . + 1 Parent=GSCOCT00032166001 | |
| 70489 chr11 manual_curation CDS 30391640 30391768 . + 1 Parent=GSCOCT00032166001 | |
| 70490 chr11 manual_curation CDS 30391134 30391211 . + 1 Parent=GSCOCT00032166001 | |
| 70491 chr11 manual_curation CDS 30390891 30391022 . + 1 Parent=GSCOCT00032166001 | |
| 70492 chr11 manual_curation CDS 30390544 30390711 . + 1 Parent=GSCOCT00032166001 | |
| 70493 chr11 manual_curation CDS 30390229 30390387 . + 1 Parent=GSCOCT00032166001 | |
| 70494 chr11 manual_curation CDS 30389623 30389775 . + 1 Parent=GSCOCT00032166001 | |
| 70495 chr11 manual_curation CDS 30389308 30389545 . + 0 Parent=GSCOCT00032166001 | |
| 70496 chr11 manual_curation gene 30393168 30397391 . - . ID=GSCOCG00032165001;Name=Cc11_g13580 | |
| 70497 chr11 manual_curation mRNA 30393168 30397391 . - . ID=GSCOCT00032165001;Parent=GSCOCG00032165001;Name=Cc11_g13580 | |
| 70498 chr11 manual_curation polypeptide 30393472 30396751 . - . ID=GSCOCP00032165001;Dbxref=InterPro:IPR004193,PFAM:PF02922,TAIR:AT1G27070.1,TAIR:AT5G03420.1,TAIR:AT5G39790.1,TrEMBL:B9HLX3,TrEMBL:B9S2D5,TrEMBL:F6HPF9;Derives_from=GSCOCT00032165001;Name=Cc11_g13580;Ontology_term=CC_evidence_code:ISS,GO:0005975,CC_EC_number:missing_EC_number,PRODUCT:Putative 5'-AMP-activated protein kinase-related,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032165001~ Putative 5'-AMP-activated protein kinase-related~ unknown_gene~ fragment;original_location=join(945915..946087%2C946263..946417%2C946930..947088%2C947166..947383%2C948121..948266%2C948356..948503%2C948942..949010%2C949099..949194);owner=coffea | |
| 70499 chr11 manual_curation exon 30396579 30397391 . - . Parent=GSCOCT00032165001 | |
| 70500 chr11 manual_curation exon 30396249 30396403 . - . Parent=GSCOCT00032165001 | |
| 70501 chr11 manual_curation exon 30395578 30395736 . - . Parent=GSCOCT00032165001 | |
| 70502 chr11 manual_curation exon 30395283 30395500 . - . Parent=GSCOCT00032165001 | |
| 70503 chr11 manual_curation exon 30394400 30394545 . - . Parent=GSCOCT00032165001 | |
| 70504 chr11 manual_curation exon 30394163 30394310 . - . Parent=GSCOCT00032165001 | |
| 70505 chr11 manual_curation exon 30393656 30393724 . - . Parent=GSCOCT00032165001 | |
| 70506 chr11 manual_curation exon 30393168 30393567 . - . Parent=GSCOCT00032165001 | |
| 70507 chr11 manual_curation CDS 30396579 30396751 . - 0 Parent=GSCOCT00032165001 | |
| 70508 chr11 manual_curation CDS 30396249 30396403 . - 2 Parent=GSCOCT00032165001 | |
| 70509 chr11 manual_curation CDS 30395578 30395736 . - 1 Parent=GSCOCT00032165001 | |
| 70510 chr11 manual_curation CDS 30395283 30395500 . - 1 Parent=GSCOCT00032165001 | |
| 70511 chr11 manual_curation CDS 30394400 30394545 . - 0 Parent=GSCOCT00032165001 | |
| 70512 chr11 manual_curation CDS 30394163 30394310 . - 2 Parent=GSCOCT00032165001 | |
| 70513 chr11 manual_curation CDS 30393656 30393724 . - 0 Parent=GSCOCT00032165001 | |
| 70514 chr11 manual_curation CDS 30393472 30393567 . - 0 Parent=GSCOCT00032165001 | |
| 70515 chr11 manual_curation gene 30408003 30413326 . + . ID=GSCOCG00032164001;Name=Cc11_g13590 | |
| 70516 chr11 manual_curation mRNA 30408003 30413326 . + . ID=GSCOCT00032164001;Parent=GSCOCG00032164001;Name=Cc11_g13590 | |
| 70517 chr11 manual_curation polypeptide 30408165 30413100 . + . ID=GSCOCP00032164001;Dbxref=InterPro:IPR000109,InterPro:IPR016196,PFAM:PF00854,SUPERFAMILY:SSF103473,SwissProt:Q8RX77,SwissProt:Q9LFX9,SwissProt:Q9M9V7,TAIR:AT1G18880.1,TAIR:AT1G27080.1,TAIR:AT1G69870.1,TrEMBL:B9S2D6,TrEMBL:D7TNF6,TrEMBL:I1J5J6;Derives_from=GSCOCT00032164001;Name=Cc11_g13590;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006857,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Nitrate transporter 1.7,CC_functional_completeness:complete,CC_gene:NRT1.7,CC_gene:NRT1.6,CC_gene:At1g18880;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032164001~ Nitrate transporter 1.7~ NRT1.7~ complete;original_location=complement(join(934303..934501%2C933482..933699%2C931744..932318%2C929566..930454));owner=coffea | |
| 70518 chr11 manual_curation exon 30412212 30413326 . + . Parent=GSCOCT00032164001 | |
| 70519 chr11 manual_curation exon 30410348 30410922 . + . Parent=GSCOCT00032164001 | |
| 70520 chr11 manual_curation exon 30408967 30409184 . + . Parent=GSCOCT00032164001 | |
| 70521 chr11 manual_curation exon 30408003 30408363 . + . Parent=GSCOCT00032164001 | |
| 70522 chr11 manual_curation CDS 30412212 30413100 . + 2 Parent=GSCOCT00032164001 | |
| 70523 chr11 manual_curation CDS 30410348 30410922 . + 0 Parent=GSCOCT00032164001 | |
| 70524 chr11 manual_curation CDS 30408967 30409184 . + 1 Parent=GSCOCT00032164001 | |
| 70525 chr11 manual_curation CDS 30408165 30408363 . + 0 Parent=GSCOCT00032164001 | |
| 70526 chr11 manual_curation gene 30423372 30428919 . + . ID=GSCOCG00032161001;Name=Cc11_g13600 | |
| 70527 chr11 manual_curation mRNA 30423372 30428919 . + . ID=GSCOCT00032161001;Parent=GSCOCG00032161001;Name=Cc11_g13600 | |
| 70528 chr11 manual_curation polypeptide 30423497 30428418 . + . ID=GSCOCP00032161001;Dbxref=InterPro:IPR002156,InterPro:IPR012337,PFAM:PF00075,PROFILE:PS50879,SUPERFAMILY:SSF53098,SwissProt:P64955,SwissProt:P64956,TAIR:AT1G24090.1,TAIR:AT3G01410.1,TAIR:AT5G51080.1,TrEMBL:B9HVB6,TrEMBL:B9T8F6,TrEMBL:F6HPK6;Derives_from=GSCOCT00032161001;Name=Cc11_g13600;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0004523,CC_EC_number:missing_EC_number,PRODUCT:Putative Polynucleotidyl transferase%2C ribonuclease H-like superfamily protein,CC_functional_completeness:modules,CC_gene:Mb2253c,CC_gene:Rv2228c;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032161001~ Putative Polynucleotidyl transferase%2C ribonuclease H-like superfamily protein~ Mb2253c~ modules;original_location=complement(join(918855..919169%2C917384..917545%2C916357..916440%2C915940..916032%2C915725..915868%2C914637..914744%2C914387..914438%2C914248..914306));owner=coffea | |
| 70529 chr11 manual_curation exon 30428360 30428919 . + . Parent=GSCOCT00032161001 | |
| 70530 chr11 manual_curation exon 30428228 30428279 . + . Parent=GSCOCT00032161001 | |
| 70531 chr11 manual_curation exon 30427922 30428029 . + . Parent=GSCOCT00032161001 | |
| 70532 chr11 manual_curation exon 30426798 30426941 . + . Parent=GSCOCT00032161001 | |
| 70533 chr11 manual_curation exon 30426634 30426726 . + . Parent=GSCOCT00032161001 | |
| 70534 chr11 manual_curation exon 30426226 30426309 . + . Parent=GSCOCT00032161001 | |
| 70535 chr11 manual_curation exon 30425121 30425282 . + . Parent=GSCOCT00032161001 | |
| 70536 chr11 manual_curation exon 30423372 30423811 . + . Parent=GSCOCT00032161001 | |
| 70537 chr11 manual_curation CDS 30428360 30428418 . + 1 Parent=GSCOCT00032161001 | |
| 70538 chr11 manual_curation CDS 30428228 30428279 . + 0 Parent=GSCOCT00032161001 | |
| 70539 chr11 manual_curation CDS 30427922 30428029 . + 0 Parent=GSCOCT00032161001 | |
| 70540 chr11 manual_curation CDS 30426798 30426941 . + 0 Parent=GSCOCT00032161001 | |
| 70541 chr11 manual_curation CDS 30426634 30426726 . + 0 Parent=GSCOCT00032161001 | |
| 70542 chr11 manual_curation CDS 30426226 30426309 . + 0 Parent=GSCOCT00032161001 | |
| 70543 chr11 manual_curation CDS 30425121 30425282 . + 0 Parent=GSCOCT00032161001 | |
| 70544 chr11 manual_curation CDS 30423497 30423811 . + 0 Parent=GSCOCT00032161001 | |
| 70545 chr11 manual_curation gene 30430039 30438709 . + . ID=GSCOCG00032160001;Name=Cc11_g13610 | |
| 70546 chr11 manual_curation mRNA 30430039 30438709 . + . ID=GSCOCT00032160001;Parent=GSCOCG00032160001;Name=Cc11_g13610 | |
| 70547 chr11 manual_curation polypeptide 30430209 30438256 . + . ID=GSCOCP00032160001;Dbxref=InterPro:IPR001365,InterPro:IPR006329,InterPro:IPR006650,PFAM:PF00962,PROSITE:PS00485,SwissProt:O80452,SwissProt:Q54DD0,SwissProt:Q84NP7,TAIR:AT2G38280.1,TIGRFAMs:TIGR01429,TrEMBL:B9S2D7,TrEMBL:F6HPG0,TrEMBL:I1KXP5;Derives_from=GSCOCT00032160001;Name=Cc11_g13610;Ontology_term=CC_evidence_code:ISS,GO:0003876,GO:0009168,GO:0019239,CC_EC_number:3.5.4.6,PRODUCT:AMP deaminase,CC_functional_completeness:modules,CC_gene:AMPD,CC_gene:amdA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032160001~ AMP deaminase~ AMPD~ modules;original_location=complement(join(911974..912457%2C911068..911240%2C910009..910222%2C909596..909771%2C909409..909460%2C909147..909274%2C908850..909029%2C908621..908688%2C908405..908547%2C907884..907945%2C907447..907560%2C906847..906987%2C906531..906683%2C906033..906086%2C905835..905945%2C905415..905588%2C905266..905346%2C904638..904736%2C904410..904478));owner=coffea | |
| 70548 chr11 manual_curation exon 30438188 30438709 . + . Parent=GSCOCT00032160001 | |
| 70549 chr11 manual_curation exon 30437930 30438028 . + . Parent=GSCOCT00032160001 | |
| 70550 chr11 manual_curation exon 30437320 30437400 . + . Parent=GSCOCT00032160001 | |
| 70551 chr11 manual_curation exon 30437078 30437251 . + . Parent=GSCOCT00032160001 | |
| 70552 chr11 manual_curation exon 30436721 30436831 . + . Parent=GSCOCT00032160001 | |
| 70553 chr11 manual_curation exon 30436580 30436633 . + . Parent=GSCOCT00032160001 | |
| 70554 chr11 manual_curation exon 30435983 30436135 . + . Parent=GSCOCT00032160001 | |
| 70555 chr11 manual_curation exon 30435679 30435819 . + . Parent=GSCOCT00032160001 | |
| 70556 chr11 manual_curation exon 30435106 30435219 . + . Parent=GSCOCT00032160001 | |
| 70557 chr11 manual_curation exon 30434721 30434782 . + . Parent=GSCOCT00032160001 | |
| 70558 chr11 manual_curation exon 30434119 30434261 . + . Parent=GSCOCT00032160001 | |
| 70559 chr11 manual_curation exon 30433978 30434045 . + . Parent=GSCOCT00032160001 | |
| 70560 chr11 manual_curation exon 30433637 30433816 . + . Parent=GSCOCT00032160001 | |
| 70561 chr11 manual_curation exon 30433392 30433519 . + . Parent=GSCOCT00032160001 | |
| 70562 chr11 manual_curation exon 30433206 30433257 . + . Parent=GSCOCT00032160001 | |
| 70563 chr11 manual_curation exon 30432895 30433070 . + . Parent=GSCOCT00032160001 | |
| 70564 chr11 manual_curation exon 30432444 30432657 . + . Parent=GSCOCT00032160001 | |
| 70565 chr11 manual_curation exon 30431426 30431598 . + . Parent=GSCOCT00032160001 | |
| 70566 chr11 manual_curation exon 30430039 30430692 . + . Parent=GSCOCT00032160001 | |
| 70567 chr11 manual_curation CDS 30438188 30438256 . + 0 Parent=GSCOCT00032160001 | |
| 70568 chr11 manual_curation CDS 30437930 30438028 . + 0 Parent=GSCOCT00032160001 | |
| 70569 chr11 manual_curation CDS 30437320 30437400 . + 0 Parent=GSCOCT00032160001 | |
| 70570 chr11 manual_curation CDS 30437078 30437251 . + 0 Parent=GSCOCT00032160001 | |
| 70571 chr11 manual_curation CDS 30436721 30436831 . + 0 Parent=GSCOCT00032160001 | |
| 70572 chr11 manual_curation CDS 30436580 30436633 . + 0 Parent=GSCOCT00032160001 | |
| 70573 chr11 manual_curation CDS 30435983 30436135 . + 0 Parent=GSCOCT00032160001 | |
| 70574 chr11 manual_curation CDS 30435679 30435819 . + 0 Parent=GSCOCT00032160001 | |
| 70575 chr11 manual_curation CDS 30435106 30435219 . + 0 Parent=GSCOCT00032160001 | |
| 70576 chr11 manual_curation CDS 30434721 30434782 . + 1 Parent=GSCOCT00032160001 | |
| 70577 chr11 manual_curation CDS 30434119 30434261 . + 2 Parent=GSCOCT00032160001 | |
| 70578 chr11 manual_curation CDS 30433978 30434045 . + 0 Parent=GSCOCT00032160001 | |
| 70579 chr11 manual_curation CDS 30433637 30433816 . + 0 Parent=GSCOCT00032160001 | |
| 70580 chr11 manual_curation CDS 30433392 30433519 . + 1 Parent=GSCOCT00032160001 | |
| 70581 chr11 manual_curation CDS 30433206 30433257 . + 0 Parent=GSCOCT00032160001 | |
| 70582 chr11 manual_curation CDS 30432895 30433070 . + 1 Parent=GSCOCT00032160001 | |
| 70583 chr11 manual_curation CDS 30432444 30432657 . + 0 Parent=GSCOCT00032160001 | |
| 70584 chr11 manual_curation CDS 30431426 30431598 . + 1 Parent=GSCOCT00032160001 | |
| 70585 chr11 manual_curation CDS 30430209 30430692 . + 0 Parent=GSCOCT00032160001 | |
| 70586 chr11 manual_curation gene 30439268 30443818 . + . ID=GSCOCG00032159001;Name=Cc11_g13620 | |
| 70587 chr11 manual_curation mRNA 30439268 30443818 . + . ID=GSCOCT00032159001;Parent=GSCOCG00032159001;Name=Cc11_g13620 | |
| 70588 chr11 manual_curation polypeptide 30439268 30443818 . + . ID=GSCOCP00032159001;Dbxref=TAIR:AT1G27090.1,TAIR:AT3G24690.1,TrEMBL:B9HMU9,TrEMBL:B9S2D8,TrEMBL:F6HPG1;Derives_from=GSCOCT00032159001;Name=Cc11_g13620;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:glycine-rich protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032159001~ glycine-rich protein~ unknown_gene~ fragment;original_location=complement(join(903087..903398%2C902663..903014%2C898848..899134));owner=coffea | |
| 70589 chr11 manual_curation exon 30443532 30443818 . + . Parent=GSCOCT00032159001 | |
| 70590 chr11 manual_curation exon 30439652 30440003 . + . Parent=GSCOCT00032159001 | |
| 70591 chr11 manual_curation exon 30439268 30439579 . + . Parent=GSCOCT00032159001 | |
| 70592 chr11 manual_curation CDS 30443532 30443818 . + 1 Parent=GSCOCT00032159001 | |
| 70593 chr11 manual_curation CDS 30439652 30440003 . + 0 Parent=GSCOCT00032159001 | |
| 70594 chr11 manual_curation CDS 30439268 30439579 . + 0 Parent=GSCOCT00032159001 | |
| 70595 chr11 manual_curation gene 30455867 30456651 . + . ID=GSCOCG00032158001;Name=Cc11_g13630 | |
| 70596 chr11 manual_curation mRNA 30455867 30456651 . + . ID=GSCOCT00032158001;Parent=GSCOCG00032158001;Name=Cc11_g13630 | |
| 70597 chr11 manual_curation polypeptide 30455916 30456498 . + . ID=GSCOCP00032158001;Dbxref=GENE3D:G3DSA:3.40.30.10,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR013766,InterPro:IPR017936,InterPro:IPR017937,PANTHER:PTHR10438,PFAM:PF00085,PRINTS:PR00421,PROFILE:PS51352,PROSITE:PS00194,SUPERFAMILY:SSF52833,SwissProt:Q38879,SwissProt:Q6Z4I3,SwissProt:Q851R5,TAIR:AT1G19730.1,TAIR:AT1G59730.1,TAIR:AT5G39950.1,TrEMBL:A5BIE9,TrEMBL:D7TNF9,TrEMBL:Q4U0W0;Derives_from=GSCOCT00032158001;Name=Cc11_g13630;Ontology_term=CC_evidence_code:ISS,GO:0045454,CC_EC_number:missing_EC_number,PRODUCT:Thioredoxin H2,CC_functional_completeness:complete,CC_gene:TRX2,CC_gene:Os07g0190800,CC_gene:Os03g0800700;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032158001~ Thioredoxin H2~ TRX2~ complete;original_location=complement(join(886643..886750%2C886389..886511%2C886168..886299));owner=coffea | |
| 70598 chr11 manual_curation exon 30456367 30456651 . + . Parent=GSCOCT00032158001 | |
| 70599 chr11 manual_curation exon 30456155 30456277 . + . Parent=GSCOCT00032158001 | |
| 70600 chr11 manual_curation exon 30455867 30456023 . + . Parent=GSCOCT00032158001 | |
| 70601 chr11 manual_curation CDS 30456367 30456498 . + 0 Parent=GSCOCT00032158001 | |
| 70602 chr11 manual_curation CDS 30456155 30456277 . + 0 Parent=GSCOCT00032158001 | |
| 70603 chr11 manual_curation CDS 30455916 30456023 . + 0 Parent=GSCOCT00032158001 | |
| 70604 chr11 manual_curation gene 30462812 30466407 . - . ID=GSCOCG00032156001;Name=Cc11_g13640 | |
| 70605 chr11 manual_curation mRNA 30462812 30466407 . - . ID=GSCOCT00032156001;Parent=GSCOCG00032156001;Name=Cc11_g13640 | |
| 70606 chr11 manual_curation polypeptide 30463242 30465539 . - . ID=GSCOCP00032156001;Dbxref=InterPro:IPR002939,InterPro:IPR008971,InterPro:IPR015609,PANTHER:PTHR11821,PFAM:PF01556,SUPERFAMILY:SSF49493,SwissProt:P25685,SwissProt:Q3MI00,SwissProt:Q9QYJ3,TAIR:AT1G10350.1,TAIR:AT1G59725.1,TAIR:AT3G08910.1,TrEMBL:Q6EIX7,TrEMBL:Q6EIX8,TrEMBL:Q6EIX9;Derives_from=GSCOCT00032156001;Name=Cc11_g13640;Ontology_term=CC_evidence_code:ISS,GO:0006457,GO:0051082,CC_EC_number:missing_EC_number,PRODUCT:Putative DnaJ homolog subfamily B member 1,CC_functional_completeness:fragment,CC_gene:DNAJB1,CC_gene:Dnajb1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032156001~ Putative DnaJ homolog subfamily B member 1~ DNAJB1~ fragment;original_location=join(877127..877218%2C878977..879424);owner=coffea | |
| 70607 chr11 manual_curation exon 30465448 30466407 . - . Parent=GSCOCT00032156001 | |
| 70608 chr11 manual_curation exon 30462812 30463689 . - . Parent=GSCOCT00032156001 | |
| 70609 chr11 manual_curation CDS 30465448 30465539 . - 0 Parent=GSCOCT00032156001 | |
| 70610 chr11 manual_curation CDS 30463242 30463689 . - 2 Parent=GSCOCT00032156001 | |
| 70611 chr11 manual_curation gene 30468344 30470173 . + . ID=GSCOCG00032155001;Name=Cc11_g13650 | |
| 70612 chr11 manual_curation mRNA 30468344 30470173 . + . ID=GSCOCT00032155001;Parent=GSCOCG00032155001;Name=Cc11_g13650 | |
| 70613 chr11 manual_curation polypeptide 30468344 30470173 . + . ID=GSCOCP00032155001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:A8MQA3,SwissProt:Q0WQW5,SwissProt:Q9FI80,TAIR:AT1G59720.1,TAIR:AT4G21065.1,TAIR:AT5G48910.1,TIGRFAMs:TIGR00756,TrEMBL:B9ILY9,TrEMBL:D7KXS9,TrEMBL:F6HPG3;Derives_from=GSCOCT00032155001;Name=Cc11_g13650;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At1g59720%2C mitochondrial,CC_functional_completeness:complete,CC_gene:PCMP-H51,CC_gene:PCMP-H28,CC_gene:PCMP-H38;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032155001~ Pentatricopeptide repeat-containing protein At1g59720%2C mitochondrial~ PCMP-H51~ complete;original_location=complement(872493..874322);owner=coffea | |
| 70614 chr11 manual_curation exon 30468344 30470173 . + . Parent=GSCOCT00032155001 | |
| 70615 chr11 manual_curation CDS 30468344 30470173 . + 0 Parent=GSCOCT00032155001 | |
| 70616 chr11 manual_curation gene 30470444 30475683 . - . ID=GSCOCG00032154001;Name=Cc11_g13660 | |
| 70617 chr11 manual_curation mRNA 30470444 30475683 . - . ID=GSCOCT00032154001;Parent=GSCOCG00032154001;Name=Cc11_g13660 | |
| 70618 chr11 manual_curation polypeptide 30471187 30475411 . - . ID=GSCOCP00032154001;Dbxref=InterPro:IPR007679,InterPro:IPR008999,PFAM:PF04601,SUPERFAMILY:SSF50405,TAIR:AT1G27100.1,TAIR:AT1G59710.1,TAIR:AT3G28630.1,TrEMBL:A5C4T4,TrEMBL:F6HPG4,TrEMBL:I1KXN9;Derives_from=GSCOCT00032154001;Name=Cc11_g13660;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Actin cross-linking protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032154001~ Actin cross-linking protein~ unknown_gene~ complete;original_location=join(867255..867854%2C869868..870461%2C870761..871052%2C871439..871479);owner=coffea | |
| 70619 chr11 manual_curation exon 30474812 30475683 . - . Parent=GSCOCT00032154001 | |
| 70620 chr11 manual_curation exon 30472205 30472798 . - . Parent=GSCOCT00032154001 | |
| 70621 chr11 manual_curation exon 30471614 30471905 . - . Parent=GSCOCT00032154001 | |
| 70622 chr11 manual_curation exon 30470444 30471227 . - . Parent=GSCOCT00032154001 | |
| 70623 chr11 manual_curation CDS 30474812 30475411 . - 0 Parent=GSCOCT00032154001 | |
| 70624 chr11 manual_curation CDS 30472205 30472798 . - 0 Parent=GSCOCT00032154001 | |
| 70625 chr11 manual_curation CDS 30471614 30471905 . - 0 Parent=GSCOCT00032154001 | |
| 70626 chr11 manual_curation CDS 30471187 30471227 . - 1 Parent=GSCOCT00032154001 | |
| 70627 chr11 manual_curation gene 30483430 30488279 . - . ID=GSCOCG00032152001;Name=Cc11_g13670 | |
| 70628 chr11 manual_curation mRNA 30483430 30488279 . - . ID=GSCOCT00032152001;Parent=GSCOCG00032152001;Name=Cc11_g13670 | |
| 70629 chr11 manual_curation polypeptide 30483675 30488096 . - . ID=GSCOCP00032152001;Dbxref=GENE3D:G3DSA:1.25.40.10,InterPro:IPR011990,SwissProt:A2VD82,SwissProt:Q5R3I4,SwissProt:Q6DIV2,TAIR:AT1G27110.1,TAIR:AT1G27150.1,TrEMBL:B9HMU3,TrEMBL:D7TNG4,TrEMBL:G7K8A8;Derives_from=GSCOCT00032152001;Name=Cc11_g13670;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:Putative Tetratricopeptide repeat protein 38,CC_functional_completeness:complete,CC_gene:ttc38,CC_gene:TTC38;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032152001~ Putative Tetratricopeptide repeat protein 38~ ttc38~ complete;original_location=join(854570..854659%2C854796..854948%2C855044..855142%2C855804..855905%2C856098..856241%2C856696..856790%2C856865..856994%2C857069..857173%2C857416..857522%2C857606..857657%2C857793..857882%2C857956..858040%2C858109..858173%2C858905..858991);owner=coffea | |
| 70630 chr11 manual_curation exon 30488007 30488279 . - . Parent=GSCOCT00032152001 | |
| 70631 chr11 manual_curation exon 30487718 30487870 . - . Parent=GSCOCT00032152001 | |
| 70632 chr11 manual_curation exon 30487524 30487622 . - . Parent=GSCOCT00032152001 | |
| 70633 chr11 manual_curation exon 30486761 30486862 . - . Parent=GSCOCT00032152001 | |
| 70634 chr11 manual_curation exon 30486425 30486568 . - . Parent=GSCOCT00032152001 | |
| 70635 chr11 manual_curation exon 30485876 30485970 . - . Parent=GSCOCT00032152001 | |
| 70636 chr11 manual_curation exon 30485672 30485801 . - . Parent=GSCOCT00032152001 | |
| 70637 chr11 manual_curation exon 30485493 30485597 . - . Parent=GSCOCT00032152001 | |
| 70638 chr11 manual_curation exon 30485144 30485250 . - . Parent=GSCOCT00032152001 | |
| 70639 chr11 manual_curation exon 30485009 30485060 . - . Parent=GSCOCT00032152001 | |
| 70640 chr11 manual_curation exon 30484784 30484873 . - . Parent=GSCOCT00032152001 | |
| 70641 chr11 manual_curation exon 30484626 30484710 . - . Parent=GSCOCT00032152001 | |
| 70642 chr11 manual_curation exon 30484493 30484557 . - . Parent=GSCOCT00032152001 | |
| 70643 chr11 manual_curation exon 30483430 30483761 . - . Parent=GSCOCT00032152001 | |
| 70644 chr11 manual_curation CDS 30488007 30488096 . - 0 Parent=GSCOCT00032152001 | |
| 70645 chr11 manual_curation CDS 30487718 30487870 . - 0 Parent=GSCOCT00032152001 | |
| 70646 chr11 manual_curation CDS 30487524 30487622 . - 0 Parent=GSCOCT00032152001 | |
| 70647 chr11 manual_curation CDS 30486761 30486862 . - 0 Parent=GSCOCT00032152001 | |
| 70648 chr11 manual_curation CDS 30486425 30486568 . - 0 Parent=GSCOCT00032152001 | |
| 70649 chr11 manual_curation CDS 30485876 30485970 . - 0 Parent=GSCOCT00032152001 | |
| 70650 chr11 manual_curation CDS 30485672 30485801 . - 2 Parent=GSCOCT00032152001 | |
| 70651 chr11 manual_curation CDS 30485493 30485597 . - 0 Parent=GSCOCT00032152001 | |
| 70652 chr11 manual_curation CDS 30485144 30485250 . - 0 Parent=GSCOCT00032152001 | |
| 70653 chr11 manual_curation CDS 30485009 30485060 . - 2 Parent=GSCOCT00032152001 | |
| 70654 chr11 manual_curation CDS 30484784 30484873 . - 0 Parent=GSCOCT00032152001 | |
| 70655 chr11 manual_curation CDS 30484626 30484710 . - 0 Parent=GSCOCT00032152001 | |
| 70656 chr11 manual_curation CDS 30484493 30484557 . - 1 Parent=GSCOCT00032152001 | |
| 70657 chr11 manual_curation CDS 30483675 30483761 . - 0 Parent=GSCOCT00032152001 | |
| 70658 chr11 manual_curation gene 30500669 30501373 . - . ID=GSCOCG00032151001;Name=Cc11_g13680 | |
| 70659 chr11 manual_curation mRNA 30500669 30501373 . - . ID=GSCOCT00032151001;Parent=GSCOCG00032151001;Name=Cc11_g13680 | |
| 70660 chr11 manual_curation polypeptide 30500669 30501373 . - . ID=GSCOCP00032151001;Dbxref=TAIR:AT1G27110.1,TAIR:AT1G27150.1,TrEMBL:B9S2E6,TrEMBL:I1PER8,TrEMBL:Q6AVK0;Derives_from=GSCOCT00032151001;Name=Cc11_g13680;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Tetratricopeptide repeat (TPR)-like superfamily protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032151001~ Putative Tetratricopeptide repeat (TPR)-like superfamily protein~ unknown_gene~ fragment;original_location=join(841293..841361%2C841572..841656%2C841725..841789%2C841911..841997);owner=coffea | |
| 70661 chr11 manual_curation exon 30501305 30501373 . - . Parent=GSCOCT00032151001 | |
| 70662 chr11 manual_curation exon 30501010 30501094 . - . Parent=GSCOCT00032151001 | |
| 70663 chr11 manual_curation exon 30500877 30500941 . - . Parent=GSCOCT00032151001 | |
| 70664 chr11 manual_curation exon 30500669 30500755 . - . Parent=GSCOCT00032151001 | |
| 70665 chr11 manual_curation CDS 30501305 30501373 . - 0 Parent=GSCOCT00032151001 | |
| 70666 chr11 manual_curation CDS 30501010 30501094 . - 0 Parent=GSCOCT00032151001 | |
| 70667 chr11 manual_curation CDS 30500877 30500941 . - 1 Parent=GSCOCT00032151001 | |
| 70668 chr11 manual_curation CDS 30500669 30500755 . - 0 Parent=GSCOCT00032151001 | |
| 70669 chr11 manual_curation gene 30501464 30505370 . - . ID=GSCOCG00032150001;Name=Cc11_g13690 | |
| 70670 chr11 manual_curation mRNA 30501464 30505370 . - . ID=GSCOCT00032150001;Parent=GSCOCG00032150001;Name=Cc11_g13690 | |
| 70671 chr11 manual_curation polypeptide 30501464 30505211 . - . ID=GSCOCP00032150001;Dbxref=GENE3D:G3DSA:1.25.40.10,InterPro:IPR011990,SwissProt:A2VD82,SwissProt:A3KMP2,SwissProt:Q6DIV2,TAIR:AT1G27110.1,TAIR:AT1G27150.1,TrEMBL:B9HMU3,TrEMBL:D7TNG4,TrEMBL:G7K8A8;Derives_from=GSCOCT00032150001;Name=Cc11_g13690;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:Putative Tetratricopeptide repeat protein 38,CC_functional_completeness:complete,CC_gene:ttc38,CC_gene:Ttc38;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032150001~ Putative Tetratricopeptide repeat protein 38~ ttc38~ complete;original_location=join(837455..837544%2C837659..837811%2C837907..838005%2C838715..838816%2C839008..839151%2C839650..839744%2C839819..839948%2C840023..840127%2C840409..840515%2C840599..840650%2C840786..840875%2C840949..841033%2C841102..841202);owner=coffea | |
| 70672 chr11 manual_curation exon 30505122 30505370 . - . Parent=GSCOCT00032150001 | |
| 70673 chr11 manual_curation exon 30504855 30505007 . - . Parent=GSCOCT00032150001 | |
| 70674 chr11 manual_curation exon 30504661 30504759 . - . Parent=GSCOCT00032150001 | |
| 70675 chr11 manual_curation exon 30503850 30503951 . - . Parent=GSCOCT00032150001 | |
| 70676 chr11 manual_curation exon 30503515 30503658 . - . Parent=GSCOCT00032150001 | |
| 70677 chr11 manual_curation exon 30502922 30503016 . - . Parent=GSCOCT00032150001 | |
| 70678 chr11 manual_curation exon 30502718 30502847 . - . Parent=GSCOCT00032150001 | |
| 70679 chr11 manual_curation exon 30502539 30502643 . - . Parent=GSCOCT00032150001 | |
| 70680 chr11 manual_curation exon 30502151 30502257 . - . Parent=GSCOCT00032150001 | |
| 70681 chr11 manual_curation exon 30502016 30502067 . - . Parent=GSCOCT00032150001 | |
| 70682 chr11 manual_curation exon 30501791 30501880 . - . Parent=GSCOCT00032150001 | |
| 70683 chr11 manual_curation exon 30501633 30501717 . - . Parent=GSCOCT00032150001 | |
| 70684 chr11 manual_curation exon 30501464 30501564 . - . Parent=GSCOCT00032150001 | |
| 70685 chr11 manual_curation CDS 30505122 30505211 . - 0 Parent=GSCOCT00032150001 | |
| 70686 chr11 manual_curation CDS 30504855 30505007 . - 0 Parent=GSCOCT00032150001 | |
| 70687 chr11 manual_curation CDS 30504661 30504759 . - 0 Parent=GSCOCT00032150001 | |
| 70688 chr11 manual_curation CDS 30503850 30503951 . - 0 Parent=GSCOCT00032150001 | |
| 70689 chr11 manual_curation CDS 30503515 30503658 . - 0 Parent=GSCOCT00032150001 | |
| 70690 chr11 manual_curation CDS 30502922 30503016 . - 0 Parent=GSCOCT00032150001 | |
| 70691 chr11 manual_curation CDS 30502718 30502847 . - 2 Parent=GSCOCT00032150001 | |
| 70692 chr11 manual_curation CDS 30502539 30502643 . - 0 Parent=GSCOCT00032150001 | |
| 70693 chr11 manual_curation CDS 30502151 30502257 . - 0 Parent=GSCOCT00032150001 | |
| 70694 chr11 manual_curation CDS 30502016 30502067 . - 2 Parent=GSCOCT00032150001 | |
| 70695 chr11 manual_curation CDS 30501791 30501880 . - 0 Parent=GSCOCT00032150001 | |
| 70696 chr11 manual_curation CDS 30501633 30501717 . - 0 Parent=GSCOCT00032150001 | |
| 70697 chr11 manual_curation CDS 30501464 30501564 . - 1 Parent=GSCOCT00032150001 | |
| 70698 chr11 manual_curation gene 30505851 30507222 . - . ID=GSCOCG00032149001;Name=Cc11_g13700 | |
| 70699 chr11 manual_curation mRNA 30505851 30507222 . - . ID=GSCOCT00032149001;Parent=GSCOCG00032149001;Name=Cc11_g13700 | |
| 70700 chr11 manual_curation polypeptide 30506110 30506980 . - . ID=GSCOCP00032149001;Dbxref=GENE3D:G3DSA:1.20.1050.10,GENE3D:G3DSA:3.40.30.10,InterPro:IPR004045,InterPro:IPR004046,InterPro:IPR010987,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR017933,PFAM:PF00043,PFAM:PF02798,PROFILE:PS50404,PROFILE:PS50405,SUPERFAMILY:SSF47616,SUPERFAMILY:SSF52833,SwissProt:Q9FUS8,SwissProt:Q9FUS9,SwissProt:Q9XIF8,TAIR:AT1G10360.1,TAIR:AT1G10370.1,TAIR:AT1G59700.1,TrEMBL:A9PG99,TrEMBL:C8KH57,TrEMBL:F2YRN9;Derives_from=GSCOCT00032149001;Name=Cc11_g13700;Ontology_term=CC_evidence_code:ISS,CC_EC_number:4.4.1.5,PRODUCT:Glutathione S-transferase U17,CC_functional_completeness:complete,CC_gene:GSTU17,CC_gene:GSTU18,CC_gene:GSTU16;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032149001~ Glutathione S-transferase U17~ GSTU17~ complete;original_location=join(835686..836003%2C836170..836556);owner=coffea | |
| 70701 chr11 manual_curation exon 30506663 30507222 . - . Parent=GSCOCT00032149001 | |
| 70702 chr11 manual_curation exon 30505851 30506496 . - . Parent=GSCOCT00032149001 | |
| 70703 chr11 manual_curation CDS 30506663 30506980 . - 0 Parent=GSCOCT00032149001 | |
| 70704 chr11 manual_curation CDS 30506110 30506496 . - 0 Parent=GSCOCT00032149001 | |
| 70705 chr11 manual_curation gene 30509576 30511058 . - . ID=GSCOCG00032148001;Name=Cc11_g13710 | |
| 70706 chr11 manual_curation mRNA 30509576 30511058 . - . ID=GSCOCT00032148001;Parent=GSCOCG00032148001;Name=Cc11_g13710 | |
| 70707 chr11 manual_curation polypeptide 30509867 30510731 . - . ID=GSCOCP00032148001;Dbxref=GENE3D:G3DSA:1.20.1050.10,GENE3D:G3DSA:3.40.30.10,InterPro:IPR004045,InterPro:IPR004046,InterPro:IPR010987,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR017933,PFAM:PF00043,PFAM:PF02798,PROFILE:PS50404,PROFILE:PS50405,SUPERFAMILY:SSF47616,SUPERFAMILY:SSF52833,SwissProt:Q9FUS8,SwissProt:Q9FUS9,SwissProt:Q9XIF8,TAIR:AT1G10360.1,TAIR:AT1G10370.1,TAIR:AT1G59700.1,TrEMBL:A9PG99,TrEMBL:F6HPH1,TrEMBL:F6HPH2;Derives_from=GSCOCT00032148001;Name=Cc11_g13710;Ontology_term=CC_evidence_code:ISS,CC_EC_number:4.4.1.5,PRODUCT:Glutathione S-transferase U17,CC_functional_completeness:complete,CC_gene:GSTU17,CC_gene:GSTU18,CC_gene:GSTU16;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032148001~ Glutathione S-transferase U17~ GSTU17~ complete;original_location=join(831935..832252%2C832428..832799);owner=coffea | |
| 70708 chr11 manual_curation exon 30510414 30511058 . - . Parent=GSCOCT00032148001 | |
| 70709 chr11 manual_curation exon 30509576 30510238 . - . Parent=GSCOCT00032148001 | |
| 70710 chr11 manual_curation CDS 30510414 30510731 . - 0 Parent=GSCOCT00032148001 | |
| 70711 chr11 manual_curation CDS 30509867 30510238 . - 0 Parent=GSCOCT00032148001 | |
| 70712 chr11 manual_curation gene 30515147 30518759 . + . ID=GSCOCG00032146001;Name=Cc11_g13720 | |
| 70713 chr11 manual_curation mRNA 30515147 30518759 . + . ID=GSCOCT00032146001;Parent=GSCOCG00032146001;Name=Cc11_g13720 | |
| 70714 chr11 manual_curation polypeptide 30515505 30518759 . + . ID=GSCOCP00032146001;Dbxref=GENE3D:G3DSA:2.120.10.30,InterPro:IPR011041,InterPro:IPR011042,InterPro:IPR012938,PFAM:PF07995,SUPERFAMILY:SSF50952,SwissProt:Q94F08,SwissProt:Q96JK4,SwissProt:Q9SSG3,TAIR:AT1G74790.1,TAIR:AT5G39970.1,TAIR:AT5G62630.1,TrEMBL:B9IEI0,TrEMBL:B9R921,TrEMBL:D7TNG9;Derives_from=GSCOCT00032146001;Name=Cc11_g13720;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0048038,CC_EC_number:missing_EC_number,PRODUCT:HIPL1 protein,CC_functional_completeness:complete,CC_gene:HIPL1,CC_gene:HIPL2,CC_gene:HHIPL1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032146001~ HIPL1 protein~ HIPL1~ complete;original_location=complement(join(827071..827161%2C826821..826978%2C825655..826452%2C825288..825504%2C824920..825098%2C824538..824779%2C824100..824441%2C823907..823952));owner=coffea | |
| 70715 chr11 manual_curation exon 30518714 30518759 . + . Parent=GSCOCT00032146001 | |
| 70716 chr11 manual_curation exon 30518225 30518566 . + . Parent=GSCOCT00032146001 | |
| 70717 chr11 manual_curation exon 30517887 30518128 . + . Parent=GSCOCT00032146001 | |
| 70718 chr11 manual_curation exon 30517568 30517746 . + . Parent=GSCOCT00032146001 | |
| 70719 chr11 manual_curation exon 30517162 30517378 . + . Parent=GSCOCT00032146001 | |
| 70720 chr11 manual_curation exon 30516214 30517011 . + . Parent=GSCOCT00032146001 | |
| 70721 chr11 manual_curation exon 30515688 30515845 . + . Parent=GSCOCT00032146001 | |
| 70722 chr11 manual_curation exon 30515147 30515595 . + . Parent=GSCOCT00032146001 | |
| 70723 chr11 manual_curation CDS 30518714 30518759 . + 2 Parent=GSCOCT00032146001 | |
| 70724 chr11 manual_curation CDS 30518225 30518566 . + 2 Parent=GSCOCT00032146001 | |
| 70725 chr11 manual_curation CDS 30517887 30518128 . + 0 Parent=GSCOCT00032146001 | |
| 70726 chr11 manual_curation CDS 30517568 30517746 . + 1 Parent=GSCOCT00032146001 | |
| 70727 chr11 manual_curation CDS 30517162 30517378 . + 0 Parent=GSCOCT00032146001 | |
| 70728 chr11 manual_curation CDS 30516214 30517011 . + 0 Parent=GSCOCT00032146001 | |
| 70729 chr11 manual_curation CDS 30515688 30515845 . + 1 Parent=GSCOCT00032146001 | |
| 70730 chr11 manual_curation CDS 30515505 30515595 . + 0 Parent=GSCOCT00032146001 | |
| 70731 chr11 manual_curation gene 30519870 30524649 . - . ID=GSCOCG00032145001;Name=Cc11_g13730 | |
| 70732 chr11 manual_curation mRNA 30519870 30524649 . - . ID=GSCOCT00032145001;Parent=GSCOCG00032145001;Name=Cc11_g13730 | |
| 70733 chr11 manual_curation polypeptide 30521194 30523452 . - . ID=GSCOCP00032145001;Dbxref=InterPro:IPR002885,PFAM:PF01535,PROFILE:PS51375,SwissProt:P0C894,SwissProt:Q0WVK7,SwissProt:Q9FIX3,TAIR:AT1G05670.1,TAIR:AT2G02150.1,TAIR:AT5G39710.1,TIGRFAMs:TIGR00756,TrEMBL:D7KF69,TrEMBL:F6HPH4,TrEMBL:G7LAK1;Derives_from=GSCOCT00032145001;Name=Cc11_g13730;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Pentatricopeptide repeat-containing protein At1g05670%2C mitochondrial,CC_functional_completeness:complete,CC_gene:At1g05670,CC_gene:EMB2745,CC_gene:At2g02150;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032145001~ Pentatricopeptide repeat-containing protein At1g05670%2C mitochondrial~ At1g05670~ complete;original_location=819214..821472;owner=coffea | |
| 70734 chr11 manual_curation exon 30520525 30520724 . - . Parent=GSCOCT00032145001 | |
| 70735 chr11 manual_curation exon 30519870 30520196 . - . Parent=GSCOCT00032145001 | |
| 70736 chr11 manual_curation exon 30521104 30524649 . - . Parent=GSCOCT00032145001 | |
| 70737 chr11 manual_curation CDS 30521194 30523452 . - 0 Parent=GSCOCT00032145001 | |
| 70738 chr11 manual_curation gene 30526973 30528421 . + . ID=GSCOCG00032144001;Name=Cc11_g13740 | |
| 70739 chr11 manual_curation mRNA 30526973 30528421 . + . ID=GSCOCT00032144001;Parent=GSCOCG00032144001;Name=Cc11_g13740 | |
| 70740 chr11 manual_curation polypeptide 30527127 30528139 . + . ID=GSCOCP00032144001;Dbxref=TAIR:AT1G10380.1,TAIR:AT3G17350.1,TAIR:AT5G50290.1,TrEMBL:B9HU74,TrEMBL:B9S2F0,TrEMBL:F6HPH5;Derives_from=GSCOCT00032144001;Name=Cc11_g13740;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative membrane lipoprotein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032144001~ Putative membrane lipoprotein~ unknown_gene~ complete;original_location=complement(join(814687..815539%2C814527..814579));owner=coffea | |
| 70741 chr11 manual_curation exon 30528087 30528421 . + . Parent=GSCOCT00032144001 | |
| 70742 chr11 manual_curation exon 30526973 30527979 . + . Parent=GSCOCT00032144001 | |
| 70743 chr11 manual_curation CDS 30528087 30528139 . + 1 Parent=GSCOCT00032144001 | |
| 70744 chr11 manual_curation CDS 30527127 30527979 . + 0 Parent=GSCOCT00032144001 | |
| 70745 chr11 manual_curation gene 30535787 30540963 . - . ID=GSCOCG00032143001;Name=Cc11_g13750 | |
| 70746 chr11 manual_curation mRNA 30535787 30540963 . - . ID=GSCOCT00032143001;Parent=GSCOCG00032143001;Name=Cc11_g13750 | |
| 70747 chr11 manual_curation polypeptide 30536130 30540660 . - . ID=GSCOCP00032143001;Dbxref=GENE3D:G3DSA:2.60.120.200,InterPro:IPR001079,InterPro:IPR002659,InterPro:IPR008985,InterPro:IPR013320,PANTHER:PTHR11214,PFAM:PF00337,PFAM:PF01762,PROFILE:PS51304,SUPERFAMILY:SSF49899,SwissProt:Q8GXG6,SwissProt:Q8RX55,SwissProt:Q9LV16,TAIR:AT1G27120.1,TAIR:AT1G74800.1,TAIR:AT5G62620.1,TrEMBL:B9R916,TrEMBL:F6GTC3,TrEMBL:F6HPH6;Derives_from=GSCOCT00032143001;Name=Cc11_g13750;Ontology_term=CC_evidence_code:ISS,GO:0005529,GO:0006486,GO:0008378,GO:0016020,CC_EC_number:2.4.1.134,PRODUCT:Probable beta-1%2C3-galactosyltransferase 18,CC_functional_completeness:complete,CC_gene:B3GALT18,CC_gene:B3GALT19,CC_gene:B3GALT17;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032143001~ Probable beta-1%2C3-galactosyltransferase 18~ B3GALT18~ complete;original_location=join(802006..802509%2C802594..802828%2C803463..803695%2C803775..804065%2C804152..804280%2C804383..804556%2C806124..806231%2C806327..806536);owner=coffea | |
| 70748 chr11 manual_curation exon 30540157 30540963 . - . Parent=GSCOCT00032143001 | |
| 70749 chr11 manual_curation exon 30539838 30540072 . - . Parent=GSCOCT00032143001 | |
| 70750 chr11 manual_curation exon 30538971 30539203 . - . Parent=GSCOCT00032143001 | |
| 70751 chr11 manual_curation exon 30538601 30538891 . - . Parent=GSCOCT00032143001 | |
| 70752 chr11 manual_curation exon 30538386 30538514 . - . Parent=GSCOCT00032143001 | |
| 70753 chr11 manual_curation exon 30538110 30538283 . - . Parent=GSCOCT00032143001 | |
| 70754 chr11 manual_curation exon 30536435 30536542 . - . Parent=GSCOCT00032143001 | |
| 70755 chr11 manual_curation exon 30535787 30536339 . - . Parent=GSCOCT00032143001 | |
| 70756 chr11 manual_curation CDS 30540157 30540660 . - 0 Parent=GSCOCT00032143001 | |
| 70757 chr11 manual_curation CDS 30539838 30540072 . - 0 Parent=GSCOCT00032143001 | |
| 70758 chr11 manual_curation CDS 30538971 30539203 . - 1 Parent=GSCOCT00032143001 | |
| 70759 chr11 manual_curation CDS 30538601 30538891 . - 0 Parent=GSCOCT00032143001 | |
| 70760 chr11 manual_curation CDS 30538386 30538514 . - 0 Parent=GSCOCT00032143001 | |
| 70761 chr11 manual_curation CDS 30538110 30538283 . - 0 Parent=GSCOCT00032143001 | |
| 70762 chr11 manual_curation CDS 30536435 30536542 . - 0 Parent=GSCOCT00032143001 | |
| 70763 chr11 manual_curation CDS 30536130 30536339 . - 0 Parent=GSCOCT00032143001 | |
| 70764 chr11 manual_curation gene 30558970 30560727 . - . ID=GSCOCG00032141001;Name=Cc11_g13760 | |
| 70765 chr11 manual_curation mRNA 30558970 30560727 . - . ID=GSCOCT00032141001;Parent=GSCOCG00032141001;Name=Cc11_g13760 | |
| 70766 chr11 manual_curation polypeptide 30559033 30560157 . - . ID=GSCOCP00032141001;Derives_from=GSCOCT00032141001;Name=Cc11_g13760;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032141001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(782509..782707%2C782797..782847%2C783025..783144%2C783241..783303%2C783404..783466%2C783548..783633);owner=coffea | |
| 70767 chr11 manual_curation exon 30559959 30560727 . - . Parent=GSCOCT00032141001 | |
| 70768 chr11 manual_curation exon 30559819 30559869 . - . Parent=GSCOCT00032141001 | |
| 70769 chr11 manual_curation exon 30559522 30559641 . - . Parent=GSCOCT00032141001 | |
| 70770 chr11 manual_curation exon 30559363 30559425 . - . Parent=GSCOCT00032141001 | |
| 70771 chr11 manual_curation exon 30559200 30559262 . - . Parent=GSCOCT00032141001 | |
| 70772 chr11 manual_curation exon 30558970 30559118 . - . Parent=GSCOCT00032141001 | |
| 70773 chr11 manual_curation CDS 30559959 30560157 . - 0 Parent=GSCOCT00032141001 | |
| 70774 chr11 manual_curation CDS 30559819 30559869 . - 1 Parent=GSCOCT00032141001 | |
| 70775 chr11 manual_curation CDS 30559522 30559641 . - 1 Parent=GSCOCT00032141001 | |
| 70776 chr11 manual_curation CDS 30559363 30559425 . - 1 Parent=GSCOCT00032141001 | |
| 70777 chr11 manual_curation CDS 30559200 30559262 . - 1 Parent=GSCOCT00032141001 | |
| 70778 chr11 manual_curation CDS 30559033 30559118 . - 1 Parent=GSCOCT00032141001 | |
| 70779 chr11 manual_curation gene 30565022 30568135 . + . ID=GSCOCG00032139001;Name=Cc11_g13770 | |
| 70780 chr11 manual_curation mRNA 30565022 30568135 . + . ID=GSCOCT00032139001;Parent=GSCOCG00032139001;Name=Cc11_g13770 | |
| 70781 chr11 manual_curation polypeptide 30565231 30567827 . + . ID=GSCOCP00032139001;Dbxref=InterPro:IPR002123,PFAM:PF01553,SMART:SM00563,SwissProt:O80437,SwissProt:Q5XF03,SwissProt:Q9LMM0,TAIR:AT1G01610.1,TAIR:AT2G38110.1,TAIR:AT4G00400.1,TrEMBL:B9H9P7,TrEMBL:B9IIF1,TrEMBL:B9S2F2;Derives_from=GSCOCT00032139001;Name=Cc11_g13770;Ontology_term=CC_evidence_code:ISS,GO:0008152,GO:0008415,CC_EC_number:2.3.1.15,PRODUCT:Putative Glycerol-3-phosphate acyltransferase 6,CC_functional_completeness:complete,CC_gene:GPAT6,CC_gene:GPAT8,CC_gene:GPAT4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032139001~ Putative Glycerol-3-phosphate acyltransferase 6~ GPAT6~ complete;original_location=complement(join(776824..777435%2C775005..775741%2C774839..774926));owner=coffea | |
| 70782 chr11 manual_curation exon 30567740 30568135 . + . Parent=GSCOCT00032139001 | |
| 70783 chr11 manual_curation exon 30566925 30567661 . + . Parent=GSCOCT00032139001 | |
| 70784 chr11 manual_curation exon 30565022 30565842 . + . Parent=GSCOCT00032139001 | |
| 70785 chr11 manual_curation CDS 30567740 30567827 . + 2 Parent=GSCOCT00032139001 | |
| 70786 chr11 manual_curation CDS 30566925 30567661 . + 0 Parent=GSCOCT00032139001 | |
| 70787 chr11 manual_curation CDS 30565231 30565842 . + 0 Parent=GSCOCT00032139001 | |
| 70788 chr11 manual_curation gene 30568585 30573147 . + . ID=GSCOCG00032138001;Name=Cc11_g13780 | |
| 70789 chr11 manual_curation mRNA 30568585 30573147 . + . ID=GSCOCT00032138001;Parent=GSCOCG00032138001;Name=Cc11_g13780 | |
| 70790 chr11 manual_curation polypeptide 30568585 30573147 . + . ID=GSCOCP00032138001;Dbxref=InterPro:IPR014812,PFAM:PF08700,SwissProt:Q54VZ8,TAIR:AT1G10180.1,TAIR:AT1G10385.1,TAIR:AT5G49830.2,TrEMBL:A5AJ65,TrEMBL:B9IIE9,TrEMBL:B9S2F3;Derives_from=GSCOCT00032138001;Name=Cc11_g13780;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Vps51/Vps67 family (components of vesicular transport) protein,CC_functional_completeness:complete,CC_gene:exoc8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032138001~ Vps51/Vps67 family (components of vesicular transport) protein~ exoc8~ complete;original_location=complement(join(773932..774081%2C773236..773333%2C771797..772841%2C771054..771566%2C770673..770861%2C769852..769988%2C769519..769681));owner=coffea | |
| 70791 chr11 manual_curation exon 30572985 30573147 . + . Parent=GSCOCT00032138001 | |
| 70792 chr11 manual_curation exon 30572678 30572814 . + . Parent=GSCOCT00032138001 | |
| 70793 chr11 manual_curation exon 30571805 30571993 . + . Parent=GSCOCT00032138001 | |
| 70794 chr11 manual_curation exon 30571100 30571612 . + . Parent=GSCOCT00032138001 | |
| 70795 chr11 manual_curation exon 30569825 30570869 . + . Parent=GSCOCT00032138001 | |
| 70796 chr11 manual_curation exon 30569333 30569430 . + . Parent=GSCOCT00032138001 | |
| 70797 chr11 manual_curation exon 30568585 30568734 . + . Parent=GSCOCT00032138001 | |
| 70798 chr11 manual_curation CDS 30572985 30573147 . + 2 Parent=GSCOCT00032138001 | |
| 70799 chr11 manual_curation CDS 30572678 30572814 . + 0 Parent=GSCOCT00032138001 | |
| 70800 chr11 manual_curation CDS 30571805 30571993 . + 0 Parent=GSCOCT00032138001 | |
| 70801 chr11 manual_curation CDS 30571100 30571612 . + 0 Parent=GSCOCT00032138001 | |
| 70802 chr11 manual_curation CDS 30569825 30570869 . + 2 Parent=GSCOCT00032138001 | |
| 70803 chr11 manual_curation CDS 30569333 30569430 . + 0 Parent=GSCOCT00032138001 | |
| 70804 chr11 manual_curation CDS 30568585 30568734 . + 0 Parent=GSCOCT00032138001 | |
| 70805 chr11 manual_curation gene 30576444 30578309 . + . ID=GSCOCG00032137001;Name=Cc11_g13790 | |
| 70806 chr11 manual_curation mRNA 30576444 30578309 . + . ID=GSCOCT00032137001;Parent=GSCOCG00032137001;Name=Cc11_g13790 | |
| 70807 chr11 manual_curation polypeptide 30576444 30578309 . + . ID=GSCOCP00032137001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SMART:SM00369,SwissProt:O22938,SwissProt:O82318,SwissProt:Q9C9H7,TAIR:AT1G71400.1,TAIR:AT2G25790.1,TAIR:AT5G23400.1,TrEMBL:B9HU77,TrEMBL:C6ZS05,TrEMBL:F6HPI0;Derives_from=GSCOCT00032137001;Name=Cc11_g13790;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:3.1.3.16,PRODUCT:Putative Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790,CC_functional_completeness:complete,CC_gene:At2g25790,CC_gene:RLP12,CC_gene:At2g41820;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032137001~ Putative Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790~ At2g25790~ complete;original_location=complement(join(766021..766222%2C764357..765741));owner=coffea | |
| 70808 chr11 manual_curation exon 30576925 30578309 . + . Parent=GSCOCT00032137001 | |
| 70809 chr11 manual_curation exon 30576444 30576645 . + . Parent=GSCOCT00032137001 | |
| 70810 chr11 manual_curation CDS 30576925 30578309 . + 1 Parent=GSCOCT00032137001 | |
| 70811 chr11 manual_curation CDS 30576444 30576645 . + 0 Parent=GSCOCT00032137001 | |
| 70812 chr11 manual_curation gene 30578662 30584072 . - . ID=GSCOCG00032136001;Name=Cc11_g13800 | |
| 70813 chr11 manual_curation mRNA 30578662 30584072 . - . ID=GSCOCT00032136001;Parent=GSCOCG00032136001;Name=Cc11_g13800 | |
| 70814 chr11 manual_curation polypeptide 30579249 30584072 . - . ID=GSCOCP00032136001;Dbxref=InterPro:IPR009769,PFAM:PF07059,TAIR:AT1G10410.1,TAIR:AT1G59650.1,TAIR:AT3G29180.1,TrEMBL:B9HU78,TrEMBL:B9S2F5,TrEMBL:I1J5H8;Derives_from=GSCOCT00032136001;Name=Cc11_g13800;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF1336),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032136001~ Protein of unknown function (DUF1336)~ unknown_gene~ complete;original_location=join(758594..758789%2C760004..760087%2C760245..760724%2C761438..761573%2C761689..761851%2C762475..762603%2C762828..763022%2C763232..763417);owner=coffea | |
| 70815 chr11 manual_curation exon 30583877 30584072 . - . Parent=GSCOCT00032136001 | |
| 70816 chr11 manual_curation exon 30582579 30582662 . - . Parent=GSCOCT00032136001 | |
| 70817 chr11 manual_curation exon 30581942 30582421 . - . Parent=GSCOCT00032136001 | |
| 70818 chr11 manual_curation exon 30581093 30581228 . - . Parent=GSCOCT00032136001 | |
| 70819 chr11 manual_curation exon 30580815 30580977 . - . Parent=GSCOCT00032136001 | |
| 70820 chr11 manual_curation exon 30580063 30580191 . - . Parent=GSCOCT00032136001 | |
| 70821 chr11 manual_curation exon 30579644 30579838 . - . Parent=GSCOCT00032136001 | |
| 70822 chr11 manual_curation exon 30578662 30579434 . - . Parent=GSCOCT00032136001 | |
| 70823 chr11 manual_curation CDS 30583877 30584072 . - 0 Parent=GSCOCT00032136001 | |
| 70824 chr11 manual_curation CDS 30582579 30582662 . - 1 Parent=GSCOCT00032136001 | |
| 70825 chr11 manual_curation CDS 30581942 30582421 . - 1 Parent=GSCOCT00032136001 | |
| 70826 chr11 manual_curation CDS 30581093 30581228 . - 1 Parent=GSCOCT00032136001 | |
| 70827 chr11 manual_curation CDS 30580815 30580977 . - 2 Parent=GSCOCT00032136001 | |
| 70828 chr11 manual_curation CDS 30580063 30580191 . - 0 Parent=GSCOCT00032136001 | |
| 70829 chr11 manual_curation CDS 30579644 30579838 . - 0 Parent=GSCOCT00032136001 | |
| 70830 chr11 manual_curation CDS 30579249 30579434 . - 0 Parent=GSCOCT00032136001 | |
| 70831 chr11 manual_curation gene 30592319 30595497 . - . ID=GSCOCG00032135001;Name=Cc11_g13810 | |
| 70832 chr11 manual_curation mRNA 30592319 30595497 . - . ID=GSCOCT00032135001;Parent=GSCOCG00032135001;Name=Cc11_g13810 | |
| 70833 chr11 manual_curation polypeptide 30593563 30595277 . - . ID=GSCOCP00032135001;Dbxref=TAIR:AT1G10417.1,TrEMBL:B9HLT8,TrEMBL:B9S2F7,TrEMBL:D7TNI1;Derives_from=GSCOCT00032135001;Name=Cc11_g13810;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Encodes protein with unknown function whose expression is repressed by inoculation with Agrobacterium tumerifaciens.,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032135001~ Putative Encodes protein with unknown function whose expression is repressed by inoculation with Agrobacterium tumerifaciens.~ unknown_gene~ fragment;original_location=join(747389..747460%2C747545..747589%2C747680..747778%2C747882..747992%2C748844..749014%2C749092..749103);owner=coffea | |
| 70834 chr11 manual_curation exon 30595206 30595497 . - . Parent=GSCOCT00032135001 | |
| 70835 chr11 manual_curation exon 30595077 30595121 . - . Parent=GSCOCT00032135001 | |
| 70836 chr11 manual_curation exon 30594888 30594986 . - . Parent=GSCOCT00032135001 | |
| 70837 chr11 manual_curation exon 30594674 30594784 . - . Parent=GSCOCT00032135001 | |
| 70838 chr11 manual_curation exon 30593652 30593822 . - . Parent=GSCOCT00032135001 | |
| 70839 chr11 manual_curation exon 30592319 30593574 . - . Parent=GSCOCT00032135001 | |
| 70840 chr11 manual_curation CDS 30595206 30595277 . - 0 Parent=GSCOCT00032135001 | |
| 70841 chr11 manual_curation CDS 30595077 30595121 . - 0 Parent=GSCOCT00032135001 | |
| 70842 chr11 manual_curation CDS 30594888 30594986 . - 0 Parent=GSCOCT00032135001 | |
| 70843 chr11 manual_curation CDS 30594674 30594784 . - 0 Parent=GSCOCT00032135001 | |
| 70844 chr11 manual_curation CDS 30593652 30593822 . - 0 Parent=GSCOCT00032135001 | |
| 70845 chr11 manual_curation CDS 30593563 30593574 . - 0 Parent=GSCOCT00032135001 | |
| 70846 chr11 manual_curation gene 30602305 30606168 . + . ID=GSCOCG00032134001;Name=Cc11_g13820 | |
| 70847 chr11 manual_curation mRNA 30602305 30606168 . + . ID=GSCOCT00032134001;Parent=GSCOCG00032134001;Name=Cc11_g13820 | |
| 70848 chr11 manual_curation polypeptide 30602694 30605687 . + . ID=GSCOCP00032134001;Dbxref=GENE3D:G3DSA:4.10.280.10,InterPro:IPR001092,InterPro:IPR011598,PFAM:PF00010,PROFILE:PS50888,SMART:SM00353,SUPERFAMILY:SSF47459,SwissProt:Q0JXE7,SwissProt:Q9LV17,SwissProt:Q9SRT2,TAIR:AT1G59640.2,TAIR:AT3G07340.1,TAIR:AT5G62610.1,TrEMBL:B9S2F8,TrEMBL:F6HPI2,TrEMBL:Q71SQ1;Derives_from=GSCOCT00032134001;Name=Cc11_g13820;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0030528,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative Transcription factor bHLH79,CC_functional_completeness:complete,CC_gene:BHLH79,CC_gene:BPE,CC_gene:BHLH62;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032134001~ Putative Transcription factor bHLH79~ BHLH79~ complete;original_location=complement(join(739652..739972%2C739072..739263%2C738814..738879%2C737849..737917%2C737614..737685%2C736979..737107));owner=coffea | |
| 70849 chr11 manual_curation exon 30605559 30606168 . + . Parent=GSCOCT00032134001 | |
| 70850 chr11 manual_curation exon 30604981 30605052 . + . Parent=GSCOCT00032134001 | |
| 70851 chr11 manual_curation exon 30604749 30604817 . + . Parent=GSCOCT00032134001 | |
| 70852 chr11 manual_curation exon 30603787 30603852 . + . Parent=GSCOCT00032134001 | |
| 70853 chr11 manual_curation exon 30603403 30603594 . + . Parent=GSCOCT00032134001 | |
| 70854 chr11 manual_curation exon 30602305 30603014 . + . Parent=GSCOCT00032134001 | |
| 70855 chr11 manual_curation CDS 30605559 30605687 . + 0 Parent=GSCOCT00032134001 | |
| 70856 chr11 manual_curation CDS 30604981 30605052 . + 0 Parent=GSCOCT00032134001 | |
| 70857 chr11 manual_curation CDS 30604749 30604817 . + 0 Parent=GSCOCT00032134001 | |
| 70858 chr11 manual_curation CDS 30603787 30603852 . + 0 Parent=GSCOCT00032134001 | |
| 70859 chr11 manual_curation CDS 30603403 30603594 . + 0 Parent=GSCOCT00032134001 | |
| 70860 chr11 manual_curation CDS 30602694 30603014 . + 0 Parent=GSCOCT00032134001 | |
| 70861 chr11 manual_curation gene 30607826 30612467 . - . ID=GSCOCG00032133001;Name=Cc11_g13830 | |
| 70862 chr11 manual_curation mRNA 30607826 30612467 . - . ID=GSCOCT00032133001;Parent=GSCOCG00032133001;Name=Cc11_g13830 | |
| 70863 chr11 manual_curation polypeptide 30608443 30612467 . - . ID=GSCOCP00032133001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR000594,InterPro:IPR006285,InterPro:IPR009036,InterPro:IPR016040,PFAM:PF00899,SUPERFAMILY:SSF69572,SwissProt:O95352,SwissProt:Q5ZKY2,SwissProt:Q94CD5,TAIR:AT5G45900.1,TIGRFAMs:TIGR01381,TrEMBL:B9S996,TrEMBL:C7G303,TrEMBL:F6HM90;Derives_from=GSCOCT00032133001;Name=Cc11_g13830;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0005737,GO:0006914,GO:0008152,CC_EC_number:missing_EC_number,PRODUCT:Ubiquitin-like modifier-activating enzyme atg7,CC_functional_completeness:complete,CC_gene:ATG7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032133001~ Ubiquitin-like modifier-activating enzyme atg7~ ATG7~ complete;original_location=join(730199..730337%2C730704..730927%2C731092..731283%2C731368..731401%2C731492..731613%2C731808..731994%2C732110..732215%2C732300..732444%2C732554..732703%2C732788..732976%2C733154..733348%2C733430..733545%2C733655..733814%2C734050..734223);owner=coffea | |
| 70864 chr11 manual_curation exon 30612329 30612467 . - . Parent=GSCOCT00032133001 | |
| 70865 chr11 manual_curation exon 30611739 30611962 . - . Parent=GSCOCT00032133001 | |
| 70866 chr11 manual_curation exon 30611383 30611574 . - . Parent=GSCOCT00032133001 | |
| 70867 chr11 manual_curation exon 30611265 30611298 . - . Parent=GSCOCT00032133001 | |
| 70868 chr11 manual_curation exon 30611053 30611174 . - . Parent=GSCOCT00032133001 | |
| 70869 chr11 manual_curation exon 30610672 30610858 . - . Parent=GSCOCT00032133001 | |
| 70870 chr11 manual_curation exon 30610451 30610556 . - . Parent=GSCOCT00032133001 | |
| 70871 chr11 manual_curation exon 30610222 30610366 . - . Parent=GSCOCT00032133001 | |
| 70872 chr11 manual_curation exon 30609963 30610112 . - . Parent=GSCOCT00032133001 | |
| 70873 chr11 manual_curation exon 30609690 30609878 . - . Parent=GSCOCT00032133001 | |
| 70874 chr11 manual_curation exon 30609318 30609512 . - . Parent=GSCOCT00032133001 | |
| 70875 chr11 manual_curation exon 30609121 30609236 . - . Parent=GSCOCT00032133001 | |
| 70876 chr11 manual_curation exon 30608852 30609011 . - . Parent=GSCOCT00032133001 | |
| 70877 chr11 manual_curation exon 30607826 30608616 . - . Parent=GSCOCT00032133001 | |
| 70878 chr11 manual_curation CDS 30612329 30612467 . - 0 Parent=GSCOCT00032133001 | |
| 70879 chr11 manual_curation CDS 30611739 30611962 . - 1 Parent=GSCOCT00032133001 | |
| 70880 chr11 manual_curation CDS 30611383 30611574 . - 0 Parent=GSCOCT00032133001 | |
| 70881 chr11 manual_curation CDS 30611265 30611298 . - 0 Parent=GSCOCT00032133001 | |
| 70882 chr11 manual_curation CDS 30611053 30611174 . - 1 Parent=GSCOCT00032133001 | |
| 70883 chr11 manual_curation CDS 30610672 30610858 . - 0 Parent=GSCOCT00032133001 | |
| 70884 chr11 manual_curation CDS 30610451 30610556 . - 1 Parent=GSCOCT00032133001 | |
| 70885 chr11 manual_curation CDS 30610222 30610366 . - 2 Parent=GSCOCT00032133001 | |
| 70886 chr11 manual_curation CDS 30609963 30610112 . - 0 Parent=GSCOCT00032133001 | |
| 70887 chr11 manual_curation CDS 30609690 30609878 . - 0 Parent=GSCOCT00032133001 | |
| 70888 chr11 manual_curation CDS 30609318 30609512 . - 0 Parent=GSCOCT00032133001 | |
| 70889 chr11 manual_curation CDS 30609121 30609236 . - 0 Parent=GSCOCT00032133001 | |
| 70890 chr11 manual_curation CDS 30608852 30609011 . - 2 Parent=GSCOCT00032133001 | |
| 70891 chr11 manual_curation CDS 30608443 30608616 . - 0 Parent=GSCOCT00032133001 | |
| 70892 chr11 manual_curation gene 30614796 30628353 . + . ID=GSCOCG00032132001;Name=Cc11_g13840 | |
| 70893 chr11 manual_curation mRNA 30614796 30628353 . + . ID=GSCOCT00032132001;Parent=GSCOCG00032132001;Name=Cc11_g13840 | |
| 70894 chr11 manual_curation polypeptide 30614987 30627987 . + . ID=GSCOCP00032132001;Dbxref=InterPro:IPR001757,InterPro:IPR005834,InterPro:IPR006539,InterPro:IPR008250,InterPro:IPR018303,PANTHER:PTHR11939,PFAM:PF00122,PFAM:PF00702,PRINTS:PR00119,PROSITE:PS00154,SwissProt:Q9LI83,SwissProt:Q9SX33,SwissProt:Q9XIE6,TAIR:AT1G26130.2,TAIR:AT1G59820.1,TAIR:AT1G68710.1,TIGRFAMs:TIGR01494,TIGRFAMs:TIGR01652,TrEMBL:B9HU80,TrEMBL:B9S2G0,TrEMBL:I1KXN1;Derives_from=GSCOCT00032132001;Name=Cc11_g13840;Ontology_term=CC_evidence_code:ISS,GO:0000287,GO:0003824,GO:0004012,GO:0005524,GO:0006754,GO:0008152,GO:0015914,GO:0016020,GO:0016021,CC_EC_number:3.6.3.1,PRODUCT:Phospholipid-transporting ATPase 3,CC_functional_completeness:complete,CC_gene:ALA3,CC_gene:ALA9,CC_gene:ALA10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032132001~ Phospholipid-transporting ATPase 3~ ALA3~ complete;original_location=complement(join(727497..727679%2C725667..725732%2C725474..725535%2C723930..724011%2C723587..723697%2C722922..722999%2C722631..722727%2C722353..722459%2C721955..722020%2C721521..721642%2C721338..721422%2C721178..721255%2C720987..721103%2C720650..720796%2C720463..720567%2C719651..719793%2C719133..719234%2C718983..719046%2C718681..718893%2C717919..718084%2C717660..717739%2C717339..717578%2C716690..716911%2C716279..716446%2C715750..716109%2C715564..715670%2C714679..714982));owner=coffea | |
| 70895 chr11 manual_curation exon 30627684 30628353 . + . Parent=GSCOCT00032132001 | |
| 70896 chr11 manual_curation exon 30626996 30627102 . + . Parent=GSCOCT00032132001 | |
| 70897 chr11 manual_curation exon 30626557 30626916 . + . Parent=GSCOCT00032132001 | |
| 70898 chr11 manual_curation exon 30626220 30626387 . + . Parent=GSCOCT00032132001 | |
| 70899 chr11 manual_curation exon 30625755 30625976 . + . Parent=GSCOCT00032132001 | |
| 70900 chr11 manual_curation exon 30625088 30625327 . + . Parent=GSCOCT00032132001 | |
| 70901 chr11 manual_curation exon 30624927 30625006 . + . Parent=GSCOCT00032132001 | |
| 70902 chr11 manual_curation exon 30624582 30624747 . + . Parent=GSCOCT00032132001 | |
| 70903 chr11 manual_curation exon 30623773 30623985 . + . Parent=GSCOCT00032132001 | |
| 70904 chr11 manual_curation exon 30623620 30623683 . + . Parent=GSCOCT00032132001 | |
| 70905 chr11 manual_curation exon 30623432 30623533 . + . Parent=GSCOCT00032132001 | |
| 70906 chr11 manual_curation exon 30622873 30623015 . + . Parent=GSCOCT00032132001 | |
| 70907 chr11 manual_curation exon 30622099 30622203 . + . Parent=GSCOCT00032132001 | |
| 70908 chr11 manual_curation exon 30621870 30622016 . + . Parent=GSCOCT00032132001 | |
| 70909 chr11 manual_curation exon 30621563 30621679 . + . Parent=GSCOCT00032132001 | |
| 70910 chr11 manual_curation exon 30621411 30621488 . + . Parent=GSCOCT00032132001 | |
| 70911 chr11 manual_curation exon 30621244 30621328 . + . Parent=GSCOCT00032132001 | |
| 70912 chr11 manual_curation exon 30621024 30621145 . + . Parent=GSCOCT00032132001 | |
| 70913 chr11 manual_curation exon 30620646 30620711 . + . Parent=GSCOCT00032132001 | |
| 70914 chr11 manual_curation exon 30620207 30620313 . + . Parent=GSCOCT00032132001 | |
| 70915 chr11 manual_curation exon 30619939 30620035 . + . Parent=GSCOCT00032132001 | |
| 70916 chr11 manual_curation exon 30619667 30619744 . + . Parent=GSCOCT00032132001 | |
| 70917 chr11 manual_curation exon 30618969 30619079 . + . Parent=GSCOCT00032132001 | |
| 70918 chr11 manual_curation exon 30618655 30618736 . + . Parent=GSCOCT00032132001 | |
| 70919 chr11 manual_curation exon 30617131 30617192 . + . Parent=GSCOCT00032132001 | |
| 70920 chr11 manual_curation exon 30616934 30616999 . + . Parent=GSCOCT00032132001 | |
| 70921 chr11 manual_curation exon 30614796 30615169 . + . Parent=GSCOCT00032132001 | |
| 70922 chr11 manual_curation CDS 30627684 30627987 . + 2 Parent=GSCOCT00032132001 | |
| 70923 chr11 manual_curation CDS 30626996 30627102 . + 0 Parent=GSCOCT00032132001 | |
| 70924 chr11 manual_curation CDS 30626557 30626916 . + 0 Parent=GSCOCT00032132001 | |
| 70925 chr11 manual_curation CDS 30626220 30626387 . + 0 Parent=GSCOCT00032132001 | |
| 70926 chr11 manual_curation CDS 30625755 30625976 . + 0 Parent=GSCOCT00032132001 | |
| 70927 chr11 manual_curation CDS 30625088 30625327 . + 0 Parent=GSCOCT00032132001 | |
| 70928 chr11 manual_curation CDS 30624927 30625006 . + 1 Parent=GSCOCT00032132001 | |
| 70929 chr11 manual_curation CDS 30624582 30624747 . + 0 Parent=GSCOCT00032132001 | |
| 70930 chr11 manual_curation CDS 30623773 30623985 . + 0 Parent=GSCOCT00032132001 | |
| 70931 chr11 manual_curation CDS 30623620 30623683 . + 2 Parent=GSCOCT00032132001 | |
| 70932 chr11 manual_curation CDS 30623432 30623533 . + 2 Parent=GSCOCT00032132001 | |
| 70933 chr11 manual_curation CDS 30622873 30623015 . + 0 Parent=GSCOCT00032132001 | |
| 70934 chr11 manual_curation CDS 30622099 30622203 . + 0 Parent=GSCOCT00032132001 | |
| 70935 chr11 manual_curation CDS 30621870 30622016 . + 0 Parent=GSCOCT00032132001 | |
| 70936 chr11 manual_curation CDS 30621563 30621679 . + 0 Parent=GSCOCT00032132001 | |
| 70937 chr11 manual_curation CDS 30621411 30621488 . + 0 Parent=GSCOCT00032132001 | |
| 70938 chr11 manual_curation CDS 30621244 30621328 . + 2 Parent=GSCOCT00032132001 | |
| 70939 chr11 manual_curation CDS 30621024 30621145 . + 0 Parent=GSCOCT00032132001 | |
| 70940 chr11 manual_curation CDS 30620646 30620711 . + 0 Parent=GSCOCT00032132001 | |
| 70941 chr11 manual_curation CDS 30620207 30620313 . + 1 Parent=GSCOCT00032132001 | |
| 70942 chr11 manual_curation CDS 30619939 30620035 . + 0 Parent=GSCOCT00032132001 | |
| 70943 chr11 manual_curation CDS 30619667 30619744 . + 0 Parent=GSCOCT00032132001 | |
| 70944 chr11 manual_curation CDS 30618969 30619079 . + 0 Parent=GSCOCT00032132001 | |
| 70945 chr11 manual_curation CDS 30618655 30618736 . + 2 Parent=GSCOCT00032132001 | |
| 70946 chr11 manual_curation CDS 30617131 30617192 . + 0 Parent=GSCOCT00032132001 | |
| 70947 chr11 manual_curation CDS 30616934 30616999 . + 0 Parent=GSCOCT00032132001 | |
| 70948 chr11 manual_curation CDS 30614987 30615169 . + 0 Parent=GSCOCT00032132001 | |
| 70949 chr11 manual_curation gene 30629564 30630384 . - . ID=GSCOCG00032131001;Name=Cc11_g13850 | |
| 70950 chr11 manual_curation mRNA 30629564 30630384 . - . ID=GSCOCT00032131001;Parent=GSCOCG00032131001;Name=Cc11_g13850 | |
| 70951 chr11 manual_curation polypeptide 30629798 30630124 . - . ID=GSCOCP00032131001;Dbxref=TAIR:AT1G27170.1,TAIR:AT1G27180.1,TrEMBL:B9I2I8,TrEMBL:B9IE71,TrEMBL:B9PAF0;Derives_from=GSCOCT00032131001;Name=Cc11_g13850;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:disease resistance protein (TIR-NBS-LRR class)%2C putative,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032131001~ disease resistance protein (TIR-NBS-LRR class)%2C putative~ unknown_gene~ fragment;original_location=712542..712868;owner=coffea | |
| 70952 chr11 manual_curation exon 30629564 30630384 . - . Parent=GSCOCT00032131001 | |
| 70953 chr11 manual_curation CDS 30629798 30630124 . - 0 Parent=GSCOCT00032131001 | |
| 70954 chr11 manual_curation gene 30630476 30631837 . - . ID=GSCOCG00032130001;Name=Cc11_g13860 | |
| 70955 chr11 manual_curation mRNA 30630476 30631837 . - . ID=GSCOCT00032130001;Parent=GSCOCG00032130001;Name=Cc11_g13860 | |
| 70956 chr11 manual_curation polypeptide 30630476 30631837 . - . ID=GSCOCP00032130001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,PFAM:PF00560,SMART:SM00369,SwissProt:Q80VQ1,SwissProt:Q96RT1,SwissProt:Q9BTT6,TAIR:AT1G27170.1,TAIR:AT1G27180.1,TAIR:AT1G69550.1,TrEMBL:A5AIN4,TrEMBL:B9IE71,TrEMBL:F6HPI4;Derives_from=GSCOCT00032130001;Name=Cc11_g13860;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative Leucine-rich repeat-containing protein 1,CC_functional_completeness:complete,CC_gene:LRRC1,CC_gene:ERBB2IP,CC_gene:Lrrc1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032130001~ Putative Leucine-rich repeat-containing protein 1~ LRRC1~ complete;original_location=710829..712190;owner=coffea | |
| 70957 chr11 manual_curation exon 30630476 30631837 . - . Parent=GSCOCT00032130001 | |
| 70958 chr11 manual_curation CDS 30630476 30631837 . - 0 Parent=GSCOCT00032130001 | |
| 70959 chr11 manual_curation gene 30632032 30638219 . - . ID=GSCOCG00032129001;Name=Cc11_g13870 | |
| 70960 chr11 manual_curation mRNA 30632032 30638219 . - . ID=GSCOCT00032129001;Parent=GSCOCG00032129001;Name=Cc11_g13870 | |
| 70961 chr11 manual_curation polypeptide 30632032 30638219 . - . ID=GSCOCP00032129001;Dbxref=InterPro:IPR000157,InterPro:IPR000767,InterPro:IPR002182,InterPro:IPR003593,PFAM:PF00931,PFAM:PF01582,PRINTS:PR00364,PROFILE:PS50104,SMART:SM00255,SMART:SM00382,SUPERFAMILY:SSF52200,SwissProt:O23530,SwissProt:O82500,SwissProt:Q40392,TAIR:AT1G27170.1,TAIR:AT1G27180.1,TAIR:AT5G17680.1,TrEMBL:A5AIN4,TrEMBL:F6HPI4,TrEMBL:I1J5H4;Derives_from=GSCOCT00032129001;Name=Cc11_g13870;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0004888,GO:0005524,GO:0006915,GO:0006952,GO:0007165,GO:0017111,GO:0031224,GO:0045087,CC_EC_number:missing_EC_number,PRODUCT:Putative disease resistance protein At4g11170,CC_functional_completeness:fragment,CC_gene:N,CC_gene:At4g11170,CC_gene:SNC1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032129001~ Putative disease resistance protein At4g11170~ N~ fragment;original_location=join(704447..704523%2C705048..705473%2C708099..708134%2C708238..709267%2C709393..709479%2C709614..710039%2C710542..710634);owner=coffea | |
| 70962 chr11 manual_curation exon 30638143 30638219 . - . Parent=GSCOCT00032129001 | |
| 70963 chr11 manual_curation exon 30637193 30637618 . - . Parent=GSCOCT00032129001 | |
| 70964 chr11 manual_curation exon 30634532 30634567 . - . Parent=GSCOCT00032129001 | |
| 70965 chr11 manual_curation exon 30633399 30634428 . - . Parent=GSCOCT00032129001 | |
| 70966 chr11 manual_curation exon 30633187 30633273 . - . Parent=GSCOCT00032129001 | |
| 70967 chr11 manual_curation exon 30632627 30633052 . - . Parent=GSCOCT00032129001 | |
| 70968 chr11 manual_curation exon 30632032 30632124 . - . Parent=GSCOCT00032129001 | |
| 70969 chr11 manual_curation CDS 30638143 30638219 . - 0 Parent=GSCOCT00032129001 | |
| 70970 chr11 manual_curation CDS 30637193 30637618 . - 2 Parent=GSCOCT00032129001 | |
| 70971 chr11 manual_curation CDS 30634532 30634567 . - 2 Parent=GSCOCT00032129001 | |
| 70972 chr11 manual_curation CDS 30633399 30634428 . - 2 Parent=GSCOCT00032129001 | |
| 70973 chr11 manual_curation CDS 30633187 30633273 . - 0 Parent=GSCOCT00032129001 | |
| 70974 chr11 manual_curation CDS 30632627 30633052 . - 0 Parent=GSCOCT00032129001 | |
| 70975 chr11 manual_curation CDS 30632032 30632124 . - 0 Parent=GSCOCT00032129001 | |
| 70976 chr11 manual_curation gene 30639184 30646795 . + . ID=GSCOCG00032128001;Name=Cc11_g13880 | |
| 70977 chr11 manual_curation mRNA 30639184 30646795 . + . ID=GSCOCT00032128001;Parent=GSCOCG00032128001;Name=Cc11_g13880 | |
| 70978 chr11 manual_curation polypeptide 30639184 30646468 . + . ID=GSCOCP00032128001;Dbxref=InterPro:IPR000157,InterPro:IPR000767,InterPro:IPR001611,InterPro:IPR002182,InterPro:IPR003591,PFAM:PF00560,PFAM:PF00931,PFAM:PF01582,PRINTS:PR00364,PROFILE:PS50104,SMART:SM00255,SMART:SM00369,SUPERFAMILY:SSF52200,SwissProt:O23530,SwissProt:O82500,SwissProt:Q40392,TAIR:AT1G27170.1,TAIR:AT1G27180.1,TAIR:AT5G17680.1,TrEMBL:A5AIN4,TrEMBL:B9S2G3,TrEMBL:F6HPI4;Derives_from=GSCOCT00032128001;Name=Cc11_g13880;Ontology_term=CC_evidence_code:ISS,GO:0004888,GO:0005515,GO:0005524,GO:0006915,GO:0006952,GO:0007165,GO:0031224,GO:0045087,CC_EC_number:3.1.3.16,PRODUCT:Putative TMV resistance protein N,CC_functional_completeness:complete,CC_gene:N,CC_gene:SNC1,CC_gene:At4g11170;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032128001~ Putative TMV resistance protein N~ N~ complete;original_location=complement(join(702989..703482%2C699945..701049%2C699082..699477%2C696792..698408%2C696198..696710));owner=coffea | |
| 70979 chr11 manual_curation exon 30645956 30646795 . + . Parent=GSCOCT00032128001 | |
| 70980 chr11 manual_curation exon 30644258 30645874 . + . Parent=GSCOCT00032128001 | |
| 70981 chr11 manual_curation exon 30643189 30643584 . + . Parent=GSCOCT00032128001 | |
| 70982 chr11 manual_curation exon 30641617 30642721 . + . Parent=GSCOCT00032128001 | |
| 70983 chr11 manual_curation exon 30639184 30639677 . + . Parent=GSCOCT00032128001 | |
| 70984 chr11 manual_curation CDS 30645956 30646468 . + 0 Parent=GSCOCT00032128001 | |
| 70985 chr11 manual_curation CDS 30644258 30645874 . + 0 Parent=GSCOCT00032128001 | |
| 70986 chr11 manual_curation CDS 30643189 30643584 . + 0 Parent=GSCOCT00032128001 | |
| 70987 chr11 manual_curation CDS 30641617 30642721 . + 2 Parent=GSCOCT00032128001 | |
| 70988 chr11 manual_curation CDS 30639184 30639677 . + 0 Parent=GSCOCT00032128001 | |
| 70989 chr11 manual_curation gene 30655273 30656782 . + . ID=GSCOCG00032127001;Name=Cc11_g13890 | |
| 70990 chr11 manual_curation mRNA 30655273 30656782 . + . ID=GSCOCT00032127001;Parent=GSCOCG00032127001;Name=Cc11_g13890 | |
| 70991 chr11 manual_curation polypeptide 30655273 30656585 . + . ID=GSCOCP00032127001;Dbxref=TrEMBL:B9IJP9,TrEMBL:B9S2G6,TrEMBL:D7TNI7;Derives_from=GSCOCT00032127001;Name=Cc11_g13890;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Predicted protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032127001~ Putative Predicted protein~ unknown_gene~ complete;original_location=complement(join(687140..687393%2C686081..686120));owner=coffea | |
| 70992 chr11 manual_curation exon 30656546 30656782 . + . Parent=GSCOCT00032127001 | |
| 70993 chr11 manual_curation exon 30655273 30655526 . + . Parent=GSCOCT00032127001 | |
| 70994 chr11 manual_curation CDS 30656546 30656585 . + 2 Parent=GSCOCT00032127001 | |
| 70995 chr11 manual_curation CDS 30655273 30655526 . + 0 Parent=GSCOCT00032127001 | |
| 70996 chr11 manual_curation gene 30660745 30666280 . + . ID=GSCOCG00032126001;Name=Cc11_g13900 | |
| 70997 chr11 manual_curation mRNA 30660745 30666280 . + . ID=GSCOCT00032126001;Parent=GSCOCG00032126001;Name=Cc11_g13900 | |
| 70998 chr11 manual_curation polypeptide 30661150 30665907 . + . ID=GSCOCP00032126001;Dbxref=InterPro:IPR004843,InterPro:IPR006186,PANTHER:PTHR11668,PFAM:PF00149,PRINTS:PR00114,PROSITE:PS00125,SMART:SM00156,SwissProt:Q07098,SwissProt:Q07099,SwissProt:Q9ZSE4,TAIR:AT1G10430.1,TAIR:AT1G59830.1,TAIR:AT1G69960.1,TrEMBL:G7K710,TrEMBL:I1KXM8,TrEMBL:Q6VUQ5;Derives_from=GSCOCT00032126001;Name=Cc11_g13900;Ontology_term=CC_evidence_code:ISS,GO:0016787,CC_EC_number:3.1.3.16,PRODUCT:Serine/threonine-protein phosphatase PP2A-2 catalytic subunit,CC_functional_completeness:complete,CC_gene:PP2A2,CC_gene:PP2A,CC_gene:PP2A1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032126001~ Serine/threonine-protein phosphatase PP2A-2 catalytic subunit~ PP2A2~ complete;original_location=complement(join(681264..681516%2C679160..679274%2C677611..677719%2C677455..677532%2C677009..677200%2C676759..676932));owner=coffea | |
| 70999 chr11 manual_curation exon 30665734 30666280 . + . Parent=GSCOCT00032126001 | |
| 71000 chr11 manual_curation exon 30665466 30665657 . + . Parent=GSCOCT00032126001 | |
| 71001 chr11 manual_curation exon 30665134 30665211 . + . Parent=GSCOCT00032126001 | |
| 71002 chr11 manual_curation exon 30664947 30665055 . + . Parent=GSCOCT00032126001 | |
| 71003 chr11 manual_curation exon 30663392 30663506 . + . Parent=GSCOCT00032126001 | |
| 71004 chr11 manual_curation exon 30660745 30661402 . + . Parent=GSCOCT00032126001 | |
| 71005 chr11 manual_curation CDS 30665734 30665907 . + 0 Parent=GSCOCT00032126001 | |
| 71006 chr11 manual_curation CDS 30665466 30665657 . + 0 Parent=GSCOCT00032126001 | |
| 71007 chr11 manual_curation CDS 30665134 30665211 . + 0 Parent=GSCOCT00032126001 | |
| 71008 chr11 manual_curation CDS 30664947 30665055 . + 2 Parent=GSCOCT00032126001 | |
| 71009 chr11 manual_curation CDS 30663392 30663506 . + 1 Parent=GSCOCT00032126001 | |
| 71010 chr11 manual_curation CDS 30661150 30661402 . + 0 Parent=GSCOCT00032126001 | |
| 71011 chr11 manual_curation gene 30666575 30669855 . - . ID=GSCOCG00032125001;Name=Cc11_g13910 | |
| 71012 chr11 manual_curation mRNA 30666575 30669855 . - . ID=GSCOCT00032125001;Parent=GSCOCG00032125001;Name=Cc11_g13910 | |
| 71013 chr11 manual_curation polypeptide 30666940 30669683 . - . ID=GSCOCP00032125001;Dbxref=TAIR:AT1G69980.1,TrEMBL:B9HLU7,TrEMBL:F6HPI6,TrEMBL:G7K703;Derives_from=GSCOCT00032125001;Name=Cc11_g13910;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B LOCATED IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032125001~ Putative unknown protein%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B Has 30 Blast hits to 30 proteins in 12 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 30%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(672983..673074%2C673359..673506%2C674468..674770%2C675613..675726);owner=coffea | |
| 71014 chr11 manual_curation exon 30669592 30669855 . - . Parent=GSCOCT00032125001 | |
| 71015 chr11 manual_curation exon 30669160 30669307 . - . Parent=GSCOCT00032125001 | |
| 71016 chr11 manual_curation exon 30667896 30668198 . - . Parent=GSCOCT00032125001 | |
| 71017 chr11 manual_curation exon 30666575 30667053 . - . Parent=GSCOCT00032125001 | |
| 71018 chr11 manual_curation CDS 30669592 30669683 . - 0 Parent=GSCOCT00032125001 | |
| 71019 chr11 manual_curation CDS 30669160 30669307 . - 2 Parent=GSCOCT00032125001 | |
| 71020 chr11 manual_curation CDS 30667896 30668198 . - 0 Parent=GSCOCT00032125001 | |
| 71021 chr11 manual_curation CDS 30666940 30667053 . - 0 Parent=GSCOCT00032125001 | |
| 71022 chr11 manual_curation gene 30671559 30674180 . - . ID=GSCOCG00032124001;Name=Cc11_g13920 | |
| 71023 chr11 manual_curation mRNA 30671559 30674180 . - . ID=GSCOCT00032124001;Parent=GSCOCG00032124001;Name=Cc11_g13920 | |
| 71024 chr11 manual_curation polypeptide 30672070 30673381 . - . ID=GSCOCP00032124001;Dbxref=InterPro:IPR001005,InterPro:IPR006447,InterPro:IPR009057,InterPro:IPR014778,InterPro:IPR017930,PFAM:PF00249,PROFILE:PS51294,SMART:SM00717,SUPERFAMILY:SSF46689,SwissProt:Q2V9B0,SwissProt:Q869R9,TAIR:AT1G19000.1,TAIR:AT1G70000.1,TAIR:AT5G47390.1,TIGRFAMs:TIGR01557,TrEMBL:A5C631,TrEMBL:A9PGA2,TrEMBL:B9S2H1;Derives_from=GSCOCT00032124001;Name=Cc11_g13920;Ontology_term=CC_evidence_code:ISS,GO:0003677,CC_EC_number:missing_EC_number,PRODUCT:Putative Transcription factor MYB1R1,CC_functional_completeness:complete,CC_gene:mybJ;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032124001~ Putative Transcription factor MYB1R1~ mybJ~ complete;original_location=join(669285..669579%2C669752..669960%2C670084..670596);owner=coffea | |
| 71025 chr11 manual_curation exon 30673087 30674180 . - . Parent=GSCOCT00032124001 | |
| 71026 chr11 manual_curation exon 30672706 30672914 . - . Parent=GSCOCT00032124001 | |
| 71027 chr11 manual_curation exon 30671559 30672582 . - . Parent=GSCOCT00032124001 | |
| 71028 chr11 manual_curation CDS 30673087 30673381 . - 0 Parent=GSCOCT00032124001 | |
| 71029 chr11 manual_curation CDS 30672706 30672914 . - 1 Parent=GSCOCT00032124001 | |
| 71030 chr11 manual_curation CDS 30672070 30672582 . - 0 Parent=GSCOCT00032124001 | |
| 71031 chr11 manual_curation gene 30680123 30682975 . + . ID=GSCOCG00032123001;Name=Cc11_g13930 | |
| 71032 chr11 manual_curation mRNA 30680123 30682975 . + . ID=GSCOCT00032123001;Parent=GSCOCG00032123001;Name=Cc11_g13930 | |
| 71033 chr11 manual_curation polypeptide 30680266 30682975 . + . ID=GSCOCP00032123001;Dbxref=InterPro:IPR021325,PFAM:PF11152,TAIR:AT1G59840.1,TrEMBL:B9S2H3,TrEMBL:D7TNJ2,TrEMBL:Q6NQK9;Derives_from=GSCOCT00032123001;Name=Cc11_g13930;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:cofactor assembly of complex C,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032123001~ cofactor assembly of complex C~ unknown_gene~ complete;original_location=complement(join(662236..662400%2C661974..662140%2C661748..661847%2C661568..661641%2C660722..660903%2C660550..660620%2C660011..660094%2C659691..659765));owner=coffea | |
| 71034 chr11 manual_curation exon 30682901 30682975 . + . Parent=GSCOCT00032123001 | |
| 71035 chr11 manual_curation exon 30682572 30682655 . + . Parent=GSCOCT00032123001 | |
| 71036 chr11 manual_curation exon 30682046 30682116 . + . Parent=GSCOCT00032123001 | |
| 71037 chr11 manual_curation exon 30681763 30681944 . + . Parent=GSCOCT00032123001 | |
| 71038 chr11 manual_curation exon 30681025 30681098 . + . Parent=GSCOCT00032123001 | |
| 71039 chr11 manual_curation exon 30680819 30680918 . + . Parent=GSCOCT00032123001 | |
| 71040 chr11 manual_curation exon 30680526 30680692 . + . Parent=GSCOCT00032123001 | |
| 71041 chr11 manual_curation exon 30680123 30680430 . + . Parent=GSCOCT00032123001 | |
| 71042 chr11 manual_curation CDS 30682901 30682975 . + 0 Parent=GSCOCT00032123001 | |
| 71043 chr11 manual_curation CDS 30682572 30682655 . + 0 Parent=GSCOCT00032123001 | |
| 71044 chr11 manual_curation CDS 30682046 30682116 . + 1 Parent=GSCOCT00032123001 | |
| 71045 chr11 manual_curation CDS 30681763 30681944 . + 2 Parent=GSCOCT00032123001 | |
| 71046 chr11 manual_curation CDS 30681025 30681098 . + 0 Parent=GSCOCT00032123001 | |
| 71047 chr11 manual_curation CDS 30680819 30680918 . + 2 Parent=GSCOCT00032123001 | |
| 71048 chr11 manual_curation CDS 30680526 30680692 . + 0 Parent=GSCOCT00032123001 | |
| 71049 chr11 manual_curation CDS 30680266 30680430 . + 0 Parent=GSCOCT00032123001 | |
| 71050 chr11 manual_curation gene 30683026 30684416 . - . ID=GSCOCG00032122001;Name=Cc11_g13940 | |
| 71051 chr11 manual_curation mRNA 30683026 30684416 . - . ID=GSCOCT00032122001;Parent=GSCOCG00032122001;Name=Cc11_g13940 | |
| 71052 chr11 manual_curation polypeptide 30683876 30684355 . - . ID=GSCOCP00032122001;Derives_from=GSCOCT00032122001;Name=Cc11_g13940;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032122001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=658311..658790;owner=coffea | |
| 71053 chr11 manual_curation exon 30683026 30684416 . - . Parent=GSCOCT00032122001 | |
| 71054 chr11 manual_curation CDS 30683876 30684355 . - 0 Parent=GSCOCT00032122001 | |
| 71055 chr11 manual_curation gene 30685194 30687565 . - . ID=GSCOCG00032121001;Name=Cc11_g13950 | |
| 71056 chr11 manual_curation mRNA 30685194 30687565 . - . ID=GSCOCT00032121001;Parent=GSCOCG00032121001;Name=Cc11_g13950 | |
| 71057 chr11 manual_curation polypeptide 30685495 30687360 . - . ID=GSCOCP00032121001;Dbxref=InterPro:IPR008166,PFAM:PF01697,SwissProt:B9S2H4,SwissProt:B9SLR1,SwissProt:Q94K98,TAIR:AT1G27200.1,TAIR:AT3G27330.1,TAIR:AT5G40720.1,TrEMBL:B9HLV1,TrEMBL:F6HPI8,TrEMBL:I1JBV1;Derives_from=GSCOCT00032121001;Name=Cc11_g13950;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:UPF0392 protein RCOM_0530710,CC_functional_completeness:complete,CC_gene:RCOM_0699480,CC_gene:At1g27200,CC_gene:RCOM_0530710;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032121001~ UPF0392 protein RCOM_0530710~ RCOM_0699480~ complete;original_location=655306..657171;owner=coffea | |
| 71058 chr11 manual_curation exon 30685194 30687565 . - . Parent=GSCOCT00032121001 | |
| 71059 chr11 manual_curation CDS 30685495 30687360 . - 0 Parent=GSCOCT00032121001 | |
| 71060 chr11 manual_curation gene 30695335 30699894 . - . ID=GSCOCG00032120001;Name=Cc11_g13960 | |
| 71061 chr11 manual_curation mRNA 30695335 30699894 . - . ID=GSCOCT00032120001;Parent=GSCOCG00032120001;Name=Cc11_g13960 | |
| 71062 chr11 manual_curation polypeptide 30696160 30699698 . - . ID=GSCOCP00032120001;Dbxref=GENE3D:G3DSA:1.25.10.10,InterPro:IPR000357,InterPro:IPR011989,InterPro:IPR016024,PFAM:PF02985,SUPERFAMILY:SSF48371,SwissProt:F4I6M4,SwissProt:Q9T041,TAIR:AT1G27210.1,TAIR:AT2G07170.1,TAIR:AT5G62580.1,TrEMBL:B9S2H6,TrEMBL:F6GSY3,TrEMBL:F6HPI9;Derives_from=GSCOCT00032120001;Name=Cc11_g13960;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:Putative ARM repeat superfamily protein,CC_functional_completeness:complete,CC_gene:SP2L,CC_gene:TOR1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032120001~ Putative ARM repeat superfamily protein~ SP2L~ complete;original_location=join(642968..643759%2C643856..643964%2C644730..645256%2C646000..646506);owner=coffea | |
| 71063 chr11 manual_curation exon 30695335 30695962 . - . Parent=GSCOCT00032120001 | |
| 71064 chr11 manual_curation exon 30698907 30699894 . - . Parent=GSCOCT00032120001 | |
| 71065 chr11 manual_curation exon 30698702 30698810 . - . Parent=GSCOCT00032120001 | |
| 71066 chr11 manual_curation exon 30697410 30697936 . - . Parent=GSCOCT00032120001 | |
| 71067 chr11 manual_curation exon 30696153 30696666 . - . Parent=GSCOCT00032120001 | |
| 71068 chr11 manual_curation CDS 30698907 30699698 . - 0 Parent=GSCOCT00032120001 | |
| 71069 chr11 manual_curation CDS 30698702 30698810 . - 0 Parent=GSCOCT00032120001 | |
| 71070 chr11 manual_curation CDS 30697410 30697936 . - 1 Parent=GSCOCT00032120001 | |
| 71071 chr11 manual_curation CDS 30696160 30696666 . - 0 Parent=GSCOCT00032120001 | |
| 71072 chr11 manual_curation gene 30708739 30709194 . + . ID=GSCOCG00032119001;Name=Cc11_g13970 | |
| 71073 chr11 manual_curation mRNA 30708739 30709194 . + . ID=GSCOCT00032119001;Parent=GSCOCG00032119001;Name=Cc11_g13970 | |
| 71074 chr11 manual_curation polypeptide 30708739 30709194 . + . ID=GSCOCP00032119001;Dbxref=InterPro:IPR001841,InterPro:IPR018957,PFAM:PF00097,PROFILE:PS50089,SMART:SM00184,SwissProt:Q8LBA0,SwissProt:Q9FG21,TAIR:AT1G74410.1,TAIR:AT3G10910.1,TAIR:AT3G20395.1,TrEMBL:A8E124,TrEMBL:B9RUA7;Derives_from=GSCOCT00032119001;Name=Cc11_g13970;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative RING/U-box superfamily protein,CC_functional_completeness:fragment,CC_gene:ATL24,CC_gene:ATL71;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032119001~ Putative RING/U-box superfamily protein~ ATL24~ fragment;original_location=complement(633472..633927);owner=coffea | |
| 71075 chr11 manual_curation exon 30708739 30709194 . + . Parent=GSCOCT00032119001 | |
| 71076 chr11 manual_curation CDS 30708739 30709194 . + 0 Parent=GSCOCT00032119001 | |
| 71077 chr11 manual_curation gene 30712959 30723892 . + . ID=GSCOCG00032118001;Name=Cc11_g13980 | |
| 71078 chr11 manual_curation mRNA 30712959 30723892 . + . ID=GSCOCT00032118001;Parent=GSCOCG00032118001;Name=Cc11_g13980 | |
| 71079 chr11 manual_curation polypeptide 30713043 30723309 . + . ID=GSCOCP00032118001;Dbxref=GENE3D:G3DSA:1.20.1160.11,InterPro:IPR003822,InterPro:IPR013194,PFAM:PF02671,PFAM:PF08295,SMART:SM00761,SUPERFAMILY:SSF47762,SwissProt:O04539,SwissProt:O48686,SwissProt:Q9LFQ3,TAIR:AT1G24190.1,TAIR:AT1G70060.1,TAIR:AT5G15020.1,TrEMBL:B9S2H7,TrEMBL:D9ZJF7,TrEMBL:F6HPJ0;Derives_from=GSCOCT00032118001;Name=Cc11_g13980;Ontology_term=CC_evidence_code:ISS,GO:0005634,CC_EC_number:missing_EC_number,PRODUCT:Paired amphipathic helix protein Sin3-like 3,CC_functional_completeness:complete,CC_gene:SNL3,CC_gene:SNL4,CC_gene:SNL2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032118001~ Paired amphipathic helix protein Sin3-like 3~ SNL3~ complete;original_location=complement(join(629550..629623%2C628849..629004%2C628553..628739%2C628371..628469%2C628015..628188%2C627662..627943%2C627498..627543%2C627104..627240%2C626715..626787%2C626540..626587%2C626089..626363%2C625841..625995%2C625373..625488%2C625041..625295%2C623042..623689%2C622833..622912%2C620759..621397%2C620539..620639%2C620319..620457%2C620068..620220%2C619808..619971%2C619628..619739%2C619357..619524));owner=coffea | |
| 71080 chr11 manual_curation exon 30723142 30723892 . + . Parent=GSCOCT00032118001 | |
| 71081 chr11 manual_curation exon 30722927 30723038 . + . Parent=GSCOCT00032118001 | |
| 71082 chr11 manual_curation exon 30722695 30722858 . + . Parent=GSCOCT00032118001 | |
| 71083 chr11 manual_curation exon 30722446 30722598 . + . Parent=GSCOCT00032118001 | |
| 71084 chr11 manual_curation exon 30722209 30722347 . + . Parent=GSCOCT00032118001 | |
| 71085 chr11 manual_curation exon 30722027 30722127 . + . Parent=GSCOCT00032118001 | |
| 71086 chr11 manual_curation exon 30721269 30721907 . + . Parent=GSCOCT00032118001 | |
| 71087 chr11 manual_curation exon 30719754 30719833 . + . Parent=GSCOCT00032118001 | |
| 71088 chr11 manual_curation exon 30718977 30719624 . + . Parent=GSCOCT00032118001 | |
| 71089 chr11 manual_curation exon 30717371 30717625 . + . Parent=GSCOCT00032118001 | |
| 71090 chr11 manual_curation exon 30717178 30717293 . + . Parent=GSCOCT00032118001 | |
| 71091 chr11 manual_curation exon 30716671 30716825 . + . Parent=GSCOCT00032118001 | |
| 71092 chr11 manual_curation exon 30716303 30716577 . + . Parent=GSCOCT00032118001 | |
| 71093 chr11 manual_curation exon 30716079 30716126 . + . Parent=GSCOCT00032118001 | |
| 71094 chr11 manual_curation exon 30715879 30715951 . + . Parent=GSCOCT00032118001 | |
| 71095 chr11 manual_curation exon 30715426 30715562 . + . Parent=GSCOCT00032118001 | |
| 71096 chr11 manual_curation exon 30715123 30715168 . + . Parent=GSCOCT00032118001 | |
| 71097 chr11 manual_curation exon 30714723 30715004 . + . Parent=GSCOCT00032118001 | |
| 71098 chr11 manual_curation exon 30714478 30714651 . + . Parent=GSCOCT00032118001 | |
| 71099 chr11 manual_curation exon 30714197 30714295 . + . Parent=GSCOCT00032118001 | |
| 71100 chr11 manual_curation exon 30713927 30714113 . + . Parent=GSCOCT00032118001 | |
| 71101 chr11 manual_curation exon 30713662 30713817 . + . Parent=GSCOCT00032118001 | |
| 71102 chr11 manual_curation exon 30712959 30713116 . + . Parent=GSCOCT00032118001 | |
| 71103 chr11 manual_curation CDS 30723142 30723309 . + 0 Parent=GSCOCT00032118001 | |
| 71104 chr11 manual_curation CDS 30722927 30723038 . + 2 Parent=GSCOCT00032118001 | |
| 71105 chr11 manual_curation CDS 30722695 30722858 . + 0 Parent=GSCOCT00032118001 | |
| 71106 chr11 manual_curation CDS 30722446 30722598 . + 0 Parent=GSCOCT00032118001 | |
| 71107 chr11 manual_curation CDS 30722209 30722347 . + 2 Parent=GSCOCT00032118001 | |
| 71108 chr11 manual_curation CDS 30722027 30722127 . + 0 Parent=GSCOCT00032118001 | |
| 71109 chr11 manual_curation CDS 30721269 30721907 . + 0 Parent=GSCOCT00032118001 | |
| 71110 chr11 manual_curation CDS 30719754 30719833 . + 1 Parent=GSCOCT00032118001 | |
| 71111 chr11 manual_curation CDS 30718977 30719624 . + 1 Parent=GSCOCT00032118001 | |
| 71112 chr11 manual_curation CDS 30717371 30717625 . + 1 Parent=GSCOCT00032118001 | |
| 71113 chr11 manual_curation CDS 30717178 30717293 . + 2 Parent=GSCOCT00032118001 | |
| 71114 chr11 manual_curation CDS 30716671 30716825 . + 0 Parent=GSCOCT00032118001 | |
| 71115 chr11 manual_curation CDS 30716303 30716577 . + 1 Parent=GSCOCT00032118001 | |
| 71116 chr11 manual_curation CDS 30716079 30716126 . + 1 Parent=GSCOCT00032118001 | |
| 71117 chr11 manual_curation CDS 30715879 30715951 . + 0 Parent=GSCOCT00032118001 | |
| 71118 chr11 manual_curation CDS 30715426 30715562 . + 1 Parent=GSCOCT00032118001 | |
| 71119 chr11 manual_curation CDS 30715123 30715168 . + 0 Parent=GSCOCT00032118001 | |
| 71120 chr11 manual_curation CDS 30714723 30715004 . + 0 Parent=GSCOCT00032118001 | |
| 71121 chr11 manual_curation CDS 30714478 30714651 . + 0 Parent=GSCOCT00032118001 | |
| 71122 chr11 manual_curation CDS 30714197 30714295 . + 0 Parent=GSCOCT00032118001 | |
| 71123 chr11 manual_curation CDS 30713927 30714113 . + 2 Parent=GSCOCT00032118001 | |
| 71124 chr11 manual_curation CDS 30713662 30713817 . + 2 Parent=GSCOCT00032118001 | |
| 71125 chr11 manual_curation CDS 30713043 30713116 . + 0 Parent=GSCOCT00032118001 | |
| 71126 chr11 manual_curation gene 30725552 30733754 . - . ID=GSCOCG00032117001;Name=Cc11_g13990 | |
| 71127 chr11 manual_curation mRNA 30725552 30733754 . - . ID=GSCOCT00032117001;Parent=GSCOCG00032117001;Name=Cc11_g13990 | |
| 71128 chr11 manual_curation polypeptide 30725933 30733754 . - . ID=GSCOCP00032117001;Dbxref=InterPro:IPR001650,InterPro:IPR011545,InterPro:IPR012961,InterPro:IPR014001,InterPro:IPR014021,PFAM:PF00270,PFAM:PF00271,PFAM:PF08148,PROFILE:PS51192,PROFILE:PS51194,SMART:SM00487,SMART:SM00490,SwissProt:B9DFG3,SwissProt:Q10701,SwissProt:Q9ZBD8,TAIR:AT1G59760.1,TAIR:AT1G70070.1,TAIR:AT3G46960.1,TrEMBL:B9S2H8,TrEMBL:D5KXN1,TrEMBL:D7TNJ6;Derives_from=GSCOCT00032117001;Name=Cc11_g13990;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0004386,GO:0005524,GO:0008026,CC_EC_number:missing_EC_number,PRODUCT:DEAD-box ATP-dependent RNA helicase ISE2%2C chloroplastic,CC_functional_completeness:complete,CC_gene:ISE2,CC_gene:helY;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032117001~ DEAD-box ATP-dependent RNA helicase ISE2%2C chloroplastic~ ISE2~ complete;original_location=join(608912..609427%2C610125..610300%2C610412..610525%2C610662..610770%2C610851..610937%2C611054..611172%2C611800..611947%2C612152..612751%2C612827..613105%2C613428..613658%2C613714..614079%2C614509..614745%2C615754..615974%2C616167..616266%2C616395..616541%2C616635..616733);owner=coffea | |
| 71129 chr11 manual_curation exon 30733239 30733754 . - . Parent=GSCOCT00032117001 | |
| 71130 chr11 manual_curation exon 30732366 30732541 . - . Parent=GSCOCT00032117001 | |
| 71131 chr11 manual_curation exon 30732141 30732254 . - . Parent=GSCOCT00032117001 | |
| 71132 chr11 manual_curation exon 30731896 30732004 . - . Parent=GSCOCT00032117001 | |
| 71133 chr11 manual_curation exon 30731729 30731815 . - . Parent=GSCOCT00032117001 | |
| 71134 chr11 manual_curation exon 30731494 30731612 . - . Parent=GSCOCT00032117001 | |
| 71135 chr11 manual_curation exon 30730719 30730866 . - . Parent=GSCOCT00032117001 | |
| 71136 chr11 manual_curation exon 30729915 30730514 . - . Parent=GSCOCT00032117001 | |
| 71137 chr11 manual_curation exon 30729561 30729839 . - . Parent=GSCOCT00032117001 | |
| 71138 chr11 manual_curation exon 30729008 30729238 . - . Parent=GSCOCT00032117001 | |
| 71139 chr11 manual_curation exon 30728587 30728952 . - . Parent=GSCOCT00032117001 | |
| 71140 chr11 manual_curation exon 30727921 30728157 . - . Parent=GSCOCT00032117001 | |
| 71141 chr11 manual_curation exon 30726692 30726912 . - . Parent=GSCOCT00032117001 | |
| 71142 chr11 manual_curation exon 30726400 30726499 . - . Parent=GSCOCT00032117001 | |
| 71143 chr11 manual_curation exon 30726125 30726271 . - . Parent=GSCOCT00032117001 | |
| 71144 chr11 manual_curation exon 30725552 30726031 . - . Parent=GSCOCT00032117001 | |
| 71145 chr11 manual_curation CDS 30733239 30733754 . - 0 Parent=GSCOCT00032117001 | |
| 71146 chr11 manual_curation CDS 30732366 30732541 . - 0 Parent=GSCOCT00032117001 | |
| 71147 chr11 manual_curation CDS 30732141 30732254 . - 2 Parent=GSCOCT00032117001 | |
| 71148 chr11 manual_curation CDS 30731896 30732004 . - 2 Parent=GSCOCT00032117001 | |
| 71149 chr11 manual_curation CDS 30731729 30731815 . - 0 Parent=GSCOCT00032117001 | |
| 71150 chr11 manual_curation CDS 30731494 30731612 . - 0 Parent=GSCOCT00032117001 | |
| 71151 chr11 manual_curation CDS 30730719 30730866 . - 2 Parent=GSCOCT00032117001 | |
| 71152 chr11 manual_curation CDS 30729915 30730514 . - 0 Parent=GSCOCT00032117001 | |
| 71153 chr11 manual_curation CDS 30729561 30729839 . - 0 Parent=GSCOCT00032117001 | |
| 71154 chr11 manual_curation CDS 30729008 30729238 . - 0 Parent=GSCOCT00032117001 | |
| 71155 chr11 manual_curation CDS 30728587 30728952 . - 0 Parent=GSCOCT00032117001 | |
| 71156 chr11 manual_curation CDS 30727921 30728157 . - 0 Parent=GSCOCT00032117001 | |
| 71157 chr11 manual_curation CDS 30726692 30726912 . - 0 Parent=GSCOCT00032117001 | |
| 71158 chr11 manual_curation CDS 30726400 30726499 . - 2 Parent=GSCOCT00032117001 | |
| 71159 chr11 manual_curation CDS 30726125 30726271 . - 0 Parent=GSCOCT00032117001 | |
| 71160 chr11 manual_curation CDS 30725933 30726031 . - 0 Parent=GSCOCT00032117001 | |
| 71161 chr11 manual_curation gene 30738141 30744434 . + . ID=GSCOCG00032116001;Name=Cc11_g14000 | |
| 71162 chr11 manual_curation mRNA 30738141 30744434 . + . ID=GSCOCT00032116001;Parent=GSCOCG00032116001;Name=Cc11_g14000 | |
| 71163 chr11 manual_curation polypeptide 30738141 30743797 . + . ID=GSCOCP00032116001;Dbxref=InterPro:IPR001017,InterPro:IPR017597,PFAM:PF00676,SwissProt:P52901,SwissProt:P52902,SwissProt:P52903,TAIR:AT1G01090.1,TAIR:AT1G24180.1,TAIR:AT1G59900.1,TIGRFAMs:TIGR03182,TrEMBL:Q3HVN3,TrEMBL:Q5ECP6,TrEMBL:Q9FR11;Derives_from=GSCOCT00032116001;Name=Cc11_g14000;Ontology_term=CC_evidence_code:ISS,GO:0004739,GO:0006096,GO:0008152,GO:0043231,GO:0055114,CC_EC_number:1.2.4.1,PRODUCT:Pyruvate dehydrogenase E1 component subunit alpha%2C mitochondrial,CC_functional_completeness:complete,CC_gene:At1g59900;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032116001~ Pyruvate dehydrogenase E1 component subunit alpha%2C mitochondrial~ At1g59900~ complete;original_location=complement(join(603841..604525%2C603412..603491%2C602120..602197%2C600104..600199%2C599946..600017%2C599691..599744%2C599514..599579%2C598869..598913));owner=coffea | |
| 71164 chr11 manual_curation exon 30743753 30744434 . + . Parent=GSCOCT00032116001 | |
| 71165 chr11 manual_curation exon 30743087 30743152 . + . Parent=GSCOCT00032116001 | |
| 71166 chr11 manual_curation exon 30742922 30742975 . + . Parent=GSCOCT00032116001 | |
| 71167 chr11 manual_curation exon 30742649 30742720 . + . Parent=GSCOCT00032116001 | |
| 71168 chr11 manual_curation exon 30742467 30742562 . + . Parent=GSCOCT00032116001 | |
| 71169 chr11 manual_curation exon 30740469 30740546 . + . Parent=GSCOCT00032116001 | |
| 71170 chr11 manual_curation exon 30739175 30739254 . + . Parent=GSCOCT00032116001 | |
| 71171 chr11 manual_curation exon 30738141 30738825 . + . Parent=GSCOCT00032116001 | |
| 71172 chr11 manual_curation CDS 30743753 30743797 . + 0 Parent=GSCOCT00032116001 | |
| 71173 chr11 manual_curation CDS 30743087 30743152 . + 0 Parent=GSCOCT00032116001 | |
| 71174 chr11 manual_curation CDS 30742922 30742975 . + 0 Parent=GSCOCT00032116001 | |
| 71175 chr11 manual_curation CDS 30742649 30742720 . + 0 Parent=GSCOCT00032116001 | |
| 71176 chr11 manual_curation CDS 30742467 30742562 . + 0 Parent=GSCOCT00032116001 | |
| 71177 chr11 manual_curation CDS 30740469 30740546 . + 0 Parent=GSCOCT00032116001 | |
| 71178 chr11 manual_curation CDS 30739175 30739254 . + 1 Parent=GSCOCT00032116001 | |
| 71179 chr11 manual_curation CDS 30738141 30738825 . + 0 Parent=GSCOCT00032116001 | |
| 71180 chr11 manual_curation gene 30754804 30756018 . + . ID=GSCOCG00032115001;Name=Cc11_g14010 | |
| 71181 chr11 manual_curation mRNA 30754804 30756018 . + . ID=GSCOCT00032115001;Parent=GSCOCG00032115001;Name=Cc11_g14010 | |
| 71182 chr11 manual_curation polypeptide 30754804 30756018 . + . ID=GSCOCP00032115001;Dbxref=InterPro:IPR002495,PFAM:PF01501,SwissProt:O04536,SwissProt:O48684,SwissProt:Q9LHD2,TAIR:AT1G24170.1,TAIR:AT1G70090.1,TAIR:AT3G28340.1,TrEMBL:F6HPJ2,TrEMBL:G7K5M7,TrEMBL:I1JBV6;Derives_from=GSCOCT00032115001;Name=Cc11_g14010;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Probable galacturonosyltransferase-like 9,CC_functional_completeness:complete,CC_gene:GATL9,CC_gene:GATL8,CC_gene:GATL10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032115001~ Probable galacturonosyltransferase-like 9~ GATL9~ complete;original_location=complement(586648..587862);owner=coffea | |
| 71183 chr11 manual_curation exon 30754804 30756018 . + . Parent=GSCOCT00032115001 | |
| 71184 chr11 manual_curation CDS 30754804 30756018 . + 0 Parent=GSCOCT00032115001 | |
| 71185 chr11 manual_curation gene 30767454 30767966 . - . ID=GSCOCG00032113001;Name=Cc11_g14020 | |
| 71186 chr11 manual_curation mRNA 30767454 30767966 . - . ID=GSCOCT00032113001;Parent=GSCOCG00032113001;Name=Cc11_g14020 | |
| 71187 chr11 manual_curation polypeptide 30767454 30767966 . - . ID=GSCOCP00032113001;Dbxref=GENE3D:G3DSA:2.60.120.10,InterPro:IPR001929,InterPro:IPR006045,InterPro:IPR011051,InterPro:IPR014710,PFAM:PF00190,PRINTS:PR00325,SMART:SM00835,SUPERFAMILY:SSF51182,SwissProt:P92998,SwissProt:Q8H021,SwissProt:Q9M263,TAIR:AT1G10460.1,TAIR:AT3G04200.1,TAIR:AT3G62020.1,TrEMBL:B9HMR6,TrEMBL:D7TNK0,TrEMBL:G7K5M6;Derives_from=GSCOCT00032113001;Name=Cc11_g14020;Ontology_term=CC_evidence_code:ISS,GO:0030145,GO:0045735,GO:0048046,CC_EC_number:1.2.3.4,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:GLP7,CC_gene:Os03g0179000,CC_gene:GLP10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032113001~ Hypothetical protein~ GLP7~ missing_functional_completeness;original_location=574700..575212;owner=coffea | |
| 71188 chr11 manual_curation exon 30767454 30767966 . - . Parent=GSCOCT00032113001 | |
| 71189 chr11 manual_curation CDS 30767454 30767966 . - 0 Parent=GSCOCT00032113001 | |
| 71190 chr11 manual_curation gene 30769698 30775547 . + . ID=GSCOCG00032112001;Name=Cc11_g14030 | |
| 71191 chr11 manual_curation mRNA 30769698 30775547 . + . ID=GSCOCT00032112001;Parent=GSCOCG00032112001;Name=Cc11_g14030 | |
| 71192 chr11 manual_curation polypeptide 30770476 30775153 . + . ID=GSCOCP00032112001;Dbxref=TAIR:AT1G24160.1,TAIR:AT1G70100.3,TAIR:AT1G70950.1,TrEMBL:B9HMR7,TrEMBL:B9S2I4,TrEMBL:D7TNK1;Derives_from=GSCOCT00032112001;Name=Cc11_g14030;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032112001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=complement(join(572149..572190%2C571219..571932%2C570700..571110%2C570401..570462%2C570112..570183%2C569215..569311%2C569012..569074%2C568793..568897%2C567513..567554));owner=coffea | |
| 71193 chr11 manual_curation exon 30775112 30775547 . + . Parent=GSCOCT00032112001 | |
| 71194 chr11 manual_curation exon 30773769 30773873 . + . Parent=GSCOCT00032112001 | |
| 71195 chr11 manual_curation exon 30773592 30773654 . + . Parent=GSCOCT00032112001 | |
| 71196 chr11 manual_curation exon 30773355 30773451 . + . Parent=GSCOCT00032112001 | |
| 71197 chr11 manual_curation exon 30772483 30772554 . + . Parent=GSCOCT00032112001 | |
| 71198 chr11 manual_curation exon 30772204 30772265 . + . Parent=GSCOCT00032112001 | |
| 71199 chr11 manual_curation exon 30771556 30771966 . + . Parent=GSCOCT00032112001 | |
| 71200 chr11 manual_curation exon 30770734 30771447 . + . Parent=GSCOCT00032112001 | |
| 71201 chr11 manual_curation exon 30769698 30770517 . + . Parent=GSCOCT00032112001 | |
| 71202 chr11 manual_curation CDS 30775112 30775153 . + 0 Parent=GSCOCT00032112001 | |
| 71203 chr11 manual_curation CDS 30773769 30773873 . + 0 Parent=GSCOCT00032112001 | |
| 71204 chr11 manual_curation CDS 30773592 30773654 . + 0 Parent=GSCOCT00032112001 | |
| 71205 chr11 manual_curation CDS 30773355 30773451 . + 2 Parent=GSCOCT00032112001 | |
| 71206 chr11 manual_curation CDS 30772483 30772554 . + 2 Parent=GSCOCT00032112001 | |
| 71207 chr11 manual_curation CDS 30772204 30772265 . + 0 Parent=GSCOCT00032112001 | |
| 71208 chr11 manual_curation CDS 30771556 30771966 . + 0 Parent=GSCOCT00032112001 | |
| 71209 chr11 manual_curation CDS 30770734 30771447 . + 0 Parent=GSCOCT00032112001 | |
| 71210 chr11 manual_curation CDS 30770476 30770517 . + 0 Parent=GSCOCT00032112001 | |
| 71211 chr11 manual_curation gene 30775616 30778619 . - . ID=GSCOCG00032111001;Name=Cc11_g14040 | |
| 71212 chr11 manual_curation mRNA 30775616 30778619 . - . ID=GSCOCT00032111001;Parent=GSCOCG00032111001;Name=Cc11_g14040 | |
| 71213 chr11 manual_curation polypeptide 30776095 30778619 . - . ID=GSCOCP00032111001;Dbxref=InterPro:IPR003104,InterPro:IPR015425,PFAM:PF02181,PROFILE:PS51444,SMART:SM00498,SUPERFAMILY:SSF101447,SwissProt:O04532,SwissProt:O48682,SwissProt:Q9XIE0,TAIR:AT1G24150.1,TAIR:AT1G59910.1,TAIR:AT1G70140.1,TrEMBL:B9HLV8,TrEMBL:B9HMR8,TrEMBL:F6HPJ3;Derives_from=GSCOCT00032111001;Name=Cc11_g14040;Ontology_term=CC_evidence_code:ISS,GO:0003779,GO:0016043,GO:0030036,CC_EC_number:missing_EC_number,PRODUCT:Putative Formin-like protein 8,CC_functional_completeness:complete,CC_gene:FH8,CC_gene:FH4,CC_gene:FH7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032111001~ Putative Formin-like protein 8~ FH8~ complete;original_location=join(564047..564776%2C564921..565185%2C565287..566571);owner=coffea | |
| 71214 chr11 manual_curation exon 30777890 30778619 . - . Parent=GSCOCT00032111001 | |
| 71215 chr11 manual_curation exon 30777481 30777745 . - . Parent=GSCOCT00032111001 | |
| 71216 chr11 manual_curation exon 30775616 30777379 . - . Parent=GSCOCT00032111001 | |
| 71217 chr11 manual_curation CDS 30777890 30778619 . - 0 Parent=GSCOCT00032111001 | |
| 71218 chr11 manual_curation CDS 30777481 30777745 . - 1 Parent=GSCOCT00032111001 | |
| 71219 chr11 manual_curation CDS 30776095 30777379 . - 2 Parent=GSCOCT00032111001 | |
| 71220 chr11 manual_curation gene 30783927 30786749 . - . ID=GSCOCG00032110001;Name=Cc11_g14050 | |
| 71221 chr11 manual_curation mRNA 30783927 30786749 . - . ID=GSCOCT00032110001;Parent=GSCOCG00032110001;Name=Cc11_g14050 | |
| 71222 chr11 manual_curation polypeptide 30784351 30786536 . - . ID=GSCOCP00032110001;Dbxref=InterPro:IPR001789,InterPro:IPR011006,PFAM:PF00072,PROFILE:PS50110,SMART:SM00448,SUPERFAMILY:SSF52172,SwissProt:O82798,SwissProt:Q9SB04,SwissProt:Q9ZWS9,TAIR:AT1G10470.1,TAIR:AT1G59940.1,TAIR:AT3G48100.1,TrEMBL:A5AP69,TrEMBL:B9S2I2,TrEMBL:D7TNK3;Derives_from=GSCOCT00032110001;Name=Cc11_g14050;Ontology_term=CC_evidence_code:ISS,GO:0000156,GO:0000160,CC_EC_number:missing_EC_number,PRODUCT:Two-component response regulator ARR3,CC_functional_completeness:complete,CC_gene:ARR3,CC_gene:ARR4,CC_gene:ARR5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032110001~ Two-component response regulator ARR3~ ARR3~ complete;original_location=join(556130..556301%2C556420..556496%2C556611..556688%2C556814..556884%2C557958..558315);owner=coffea | |
| 71223 chr11 manual_curation exon 30786365 30786749 . - . Parent=GSCOCT00032110001 | |
| 71224 chr11 manual_curation exon 30786170 30786246 . - . Parent=GSCOCT00032110001 | |
| 71225 chr11 manual_curation exon 30785978 30786055 . - . Parent=GSCOCT00032110001 | |
| 71226 chr11 manual_curation exon 30785782 30785852 . - . Parent=GSCOCT00032110001 | |
| 71227 chr11 manual_curation exon 30783927 30784708 . - . Parent=GSCOCT00032110001 | |
| 71228 chr11 manual_curation CDS 30786365 30786536 . - 0 Parent=GSCOCT00032110001 | |
| 71229 chr11 manual_curation CDS 30786170 30786246 . - 1 Parent=GSCOCT00032110001 | |
| 71230 chr11 manual_curation CDS 30785978 30786055 . - 0 Parent=GSCOCT00032110001 | |
| 71231 chr11 manual_curation CDS 30785782 30785852 . - 0 Parent=GSCOCT00032110001 | |
| 71232 chr11 manual_curation CDS 30784351 30784708 . - 2 Parent=GSCOCT00032110001 | |
| 71233 chr11 manual_curation gene 30795710 30800160 . + . ID=GSCOCG00032109001;Name=Cc11_g14060 | |
| 71234 chr11 manual_curation mRNA 30795710 30800160 . + . ID=GSCOCT00032109001;Parent=GSCOCG00032109001;Name=Cc11_g14060 | |
| 71235 chr11 manual_curation polypeptide 30795936 30799776 . + . ID=GSCOCP00032109001;Dbxref=TAIR:AT1G70160.1,TAIR:AT4G27020.1,TAIR:AT5G54870.1,TrEMBL:B9S2I9,TrEMBL:D7TNK5,TrEMBL:G7K5L2;Derives_from=GSCOCT00032109001;Name=Cc11_g14060;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032109001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27020.1)%3B Has 108 Blast hits to 108 proteins in 20 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 89%3B Viruses - 0%3B Other Eukaryotes - 19 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(546425..546730%2C545361..545501%2C544905..545270%2C543958..544200%2C543568..543660%2C543185..543385%2C542890..543102));owner=coffea | |
| 71236 chr11 manual_curation exon 30799564 30800160 . + . Parent=GSCOCT00032109001 | |
| 71237 chr11 manual_curation exon 30799281 30799481 . + . Parent=GSCOCT00032109001 | |
| 71238 chr11 manual_curation exon 30799006 30799098 . + . Parent=GSCOCT00032109001 | |
| 71239 chr11 manual_curation exon 30798466 30798708 . + . Parent=GSCOCT00032109001 | |
| 71240 chr11 manual_curation exon 30797396 30797761 . + . Parent=GSCOCT00032109001 | |
| 71241 chr11 manual_curation exon 30797165 30797305 . + . Parent=GSCOCT00032109001 | |
| 71242 chr11 manual_curation exon 30795710 30796241 . + . Parent=GSCOCT00032109001 | |
| 71243 chr11 manual_curation CDS 30799564 30799776 . + 0 Parent=GSCOCT00032109001 | |
| 71244 chr11 manual_curation CDS 30799281 30799481 . + 0 Parent=GSCOCT00032109001 | |
| 71245 chr11 manual_curation CDS 30799006 30799098 . + 0 Parent=GSCOCT00032109001 | |
| 71246 chr11 manual_curation CDS 30798466 30798708 . + 0 Parent=GSCOCT00032109001 | |
| 71247 chr11 manual_curation CDS 30797396 30797761 . + 0 Parent=GSCOCT00032109001 | |
| 71248 chr11 manual_curation CDS 30797165 30797305 . + 0 Parent=GSCOCT00032109001 | |
| 71249 chr11 manual_curation CDS 30795936 30796241 . + 0 Parent=GSCOCT00032109001 | |
| 71250 chr11 manual_curation gene 30800209 30800581 . - . ID=GSCOCG00032108001;Name=Cc11_g14070 | |
| 71251 chr11 manual_curation mRNA 30800209 30800581 . - . ID=GSCOCT00032108001;Parent=GSCOCG00032108001;Name=Cc11_g14070 | |
| 71252 chr11 manual_curation polypeptide 30800209 30800581 . - . ID=GSCOCP00032108001;Dbxref=GENE3D:G3DSA:3.20.20.100,InterPro:IPR001395,InterPro:IPR018170,PANTHER:PTHR11732,PFAM:PF00248,PROSITE:PS00063,SUPERFAMILY:SSF51430,SwissProt:Q7G764,SwissProt:Q7G765,SwissProt:Q84TF0,TAIR:AT1G59950.1,TAIR:AT1G59960.1,TAIR:AT2G37790.1,TrEMBL:B9S2J0,TrEMBL:B9S2J1,TrEMBL:Q6TY50;Derives_from=GSCOCT00032108001;Name=Cc11_g14070;Ontology_term=CC_evidence_code:ISS,GO:0016491,GO:0055114,CC_EC_number:2.3.1.170,PRODUCT:Probable NAD(P)H-dependent oxidoreductase 1,CC_functional_completeness:fragment,CC_gene:Os10g0113000,CC_gene:Os10g0113100,CC_gene:AKR4C10;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032108001~ Probable NAD(P)H-dependent oxidoreductase 1~ Os10g0113000~ fragment;original_location=join(542085..542141%2C542233..542457);owner=coffea | |
| 71253 chr11 manual_curation exon 30800525 30800581 . - . Parent=GSCOCT00032108001 | |
| 71254 chr11 manual_curation exon 30800209 30800433 . - . Parent=GSCOCT00032108001 | |
| 71255 chr11 manual_curation CDS 30800525 30800581 . - 0 Parent=GSCOCT00032108001 | |
| 71256 chr11 manual_curation CDS 30800209 30800433 . - 0 Parent=GSCOCT00032108001 | |
| 71257 chr11 manual_curation gene 30800695 30801519 . - . ID=GSCOCG00032107001;Name=Cc11_g14080 | |
| 71258 chr11 manual_curation mRNA 30800695 30801519 . - . ID=GSCOCT00032107001;Parent=GSCOCG00032107001;Name=Cc11_g14080 | |
| 71259 chr11 manual_curation polypeptide 30800695 30801519 . - . ID=GSCOCP00032107001;Dbxref=GENE3D:G3DSA:3.20.20.100,InterPro:IPR001395,InterPro:IPR018170,InterPro:IPR020471,PANTHER:PTHR11732,PFAM:PF00248,PRINTS:PR00069,PROSITE:PS00798,SUPERFAMILY:SSF51430,SwissProt:P26690,SwissProt:Q7G764,SwissProt:Q7G765,TAIR:AT1G59950.1,TAIR:AT1G59960.1,TAIR:AT5G62420.1,TrEMBL:B9S2J0,TrEMBL:B9S2J1,TrEMBL:Q6TY50;Derives_from=GSCOCT00032107001;Name=Cc11_g14080;Ontology_term=CC_evidence_code:ISS,GO:0016491,GO:0055114,CC_EC_number:2.3.1.170,PRODUCT:Probable NAD(P)H-dependent oxidoreductase 1,CC_functional_completeness:fragment,CC_gene:Os10g0113000,CC_gene:Os10g0113100;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032107001~ Probable NAD(P)H-dependent oxidoreductase 1~ Os10g0113000~ fragment;original_location=join(541147..541478%2C541632..541856%2C541962..541971);owner=coffea | |
| 71260 chr11 manual_curation exon 30801188 30801519 . - . Parent=GSCOCT00032107001 | |
| 71261 chr11 manual_curation exon 30800810 30801034 . - . Parent=GSCOCT00032107001 | |
| 71262 chr11 manual_curation exon 30800695 30800704 . - . Parent=GSCOCT00032107001 | |
| 71263 chr11 manual_curation CDS 30801188 30801519 . - 0 Parent=GSCOCT00032107001 | |
| 71264 chr11 manual_curation CDS 30800810 30801034 . - 2 Parent=GSCOCT00032107001 | |
| 71265 chr11 manual_curation CDS 30800695 30800704 . - 2 Parent=GSCOCT00032107001 | |
| 71266 chr11 manual_curation gene 30803856 30804495 . - . ID=GSCOCG00032106001;Name=Cc11_g14090 | |
| 71267 chr11 manual_curation mRNA 30803856 30804495 . - . ID=GSCOCT00032106001;Parent=GSCOCG00032106001;Name=Cc11_g14090 | |
| 71268 chr11 manual_curation polypeptide 30804304 30804495 . - . ID=GSCOCP00032106001;Derives_from=GSCOCT00032106001;Name=Cc11_g14090;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032106001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=538171..538362;owner=coffea | |
| 71269 chr11 manual_curation exon 30803856 30804495 . - . Parent=GSCOCT00032106001 | |
| 71270 chr11 manual_curation CDS 30804304 30804495 . - 0 Parent=GSCOCT00032106001 | |
| 71271 chr11 manual_curation gene 30805990 30806552 . - . ID=GSCOCG00032105001;Name=Cc11_g14100 | |
| 71272 chr11 manual_curation mRNA 30805990 30806552 . - . ID=GSCOCT00032105001;Parent=GSCOCG00032105001;Name=Cc11_g14100 | |
| 71273 chr11 manual_curation polypeptide 30806063 30806314 . - . ID=GSCOCP00032105001;Derives_from=GSCOCT00032105001;Name=Cc11_g14100;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032105001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=536352..536603;owner=coffea | |
| 71274 chr11 manual_curation exon 30805990 30806552 . - . Parent=GSCOCT00032105001 | |
| 71275 chr11 manual_curation CDS 30806063 30806314 . - 0 Parent=GSCOCT00032105001 | |
| 71276 chr11 manual_curation gene 30807813 30808509 . - . ID=GSCOCG00032104001;Name=Cc11_g14110 | |
| 71277 chr11 manual_curation mRNA 30807813 30808509 . - . ID=GSCOCT00032104001;Parent=GSCOCG00032104001;Name=Cc11_g14110 | |
| 71278 chr11 manual_curation polypeptide 30808180 30808425 . - . ID=GSCOCP00032104001;Dbxref=TAIR:AT3G48180.1,TrEMBL:B9IEL5,TrEMBL:B9R8Y7,TrEMBL:Q0WYB6;Derives_from=GSCOCT00032104001;Name=Cc11_g14110;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032104001~ Putative unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19020.1)%3B Has 84 Blast hits to 84 proteins in 15 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 84%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=534241..534486;owner=coffea | |
| 71279 chr11 manual_curation exon 30807813 30808509 . - . Parent=GSCOCT00032104001 | |
| 71280 chr11 manual_curation CDS 30808180 30808425 . - 0 Parent=GSCOCT00032104001 | |
| 71281 chr11 manual_curation gene 30809541 30810616 . - . ID=GSCOCG00032103001;Name=Cc11_g14120 | |
| 71282 chr11 manual_curation mRNA 30809541 30810616 . - . ID=GSCOCT00032103001;Parent=GSCOCG00032103001;Name=Cc11_g14120 | |
| 71283 chr11 manual_curation polypeptide 30810233 30810490 . - . ID=GSCOCP00032103001;Dbxref=TAIR:AT3G48180.1,TrEMBL:B9IEL5,TrEMBL:B9R8Y7,TrEMBL:Q0WYB6;Derives_from=GSCOCT00032103001;Name=Cc11_g14120;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032103001~ Putative unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19020.1)%3B Has 84 Blast hits to 84 proteins in 15 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 84%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=532176..532433;owner=coffea | |
| 71284 chr11 manual_curation exon 30809541 30810616 . - . Parent=GSCOCT00032103001 | |
| 71285 chr11 manual_curation CDS 30810233 30810490 . - 0 Parent=GSCOCT00032103001 | |
| 71286 chr11 manual_curation gene 30815317 30816444 . + . ID=GSCOCG00032101001;Name=Cc11_g14130 | |
| 71287 chr11 manual_curation mRNA 30815317 30816444 . + . ID=GSCOCT00032101001;Parent=GSCOCG00032101001;Name=Cc11_g14130 | |
| 71288 chr11 manual_curation polypeptide 30815317 30816444 . + . ID=GSCOCP00032101001;Dbxref=InterPro:IPR001818,InterPro:IPR002477,InterPro:IPR006026,InterPro:IPR021158,InterPro:IPR021190,PFAM:PF00413,PFAM:PF01471,PRINTS:PR00138,PROSITE:PS00546,SMART:SM00235,SUPERFAMILY:SSF47090,SwissProt:P29136,SwissProt:P50280,SwissProt:P91953,TAIR:AT1G24140.1,TAIR:AT1G59970.1,TAIR:AT1G70170.1,TrEMBL:B9S2J2,TrEMBL:C3PTL6,TrEMBL:D3Y681;Derives_from=GSCOCT00032101001;Name=Cc11_g14130;Ontology_term=CC_evidence_code:ISS,GO:0004222,GO:0006508,GO:0008152,GO:0008237,GO:0008270,GO:0031012,CC_EC_number:3.4.24.12,PRODUCT:Metalloendoproteinase 1,CC_functional_completeness:modules,CC_gene:Mmp7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032101001~ Metalloendoproteinase 1~ Mmp7~ modules;original_location=complement(526222..527349);owner=coffea | |
| 71289 chr11 manual_curation exon 30815317 30816444 . + . Parent=GSCOCT00032101001 | |
| 71290 chr11 manual_curation CDS 30815317 30816444 . + 0 Parent=GSCOCT00032101001 | |
| 71291 chr11 manual_curation gene 30821393 30822667 . + . ID=GSCOCG00032100001;Name=Cc11_g14140 | |
| 71292 chr11 manual_curation mRNA 30821393 30822667 . + . ID=GSCOCT00032100001;Parent=GSCOCG00032100001;Name=Cc11_g14140 | |
| 71293 chr11 manual_curation polypeptide 30821393 30822667 . + . ID=GSCOCP00032100001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019781,InterPro:IPR019782,InterPro:IPR020472,PFAM:PF00400,PRINTS:PR00320,PROFILE:PS50082,PROFILE:PS50294,SMART:SM00320,SUPERFAMILY:SSF50978,SwissProt:Q00808,SwissProt:Q8YRI1,SwissProt:Q8YV57,TAIR:AT1G24130.1,TAIR:AT1G24530.1,TAIR:AT5G50120.1,TrEMBL:A5B097,TrEMBL:B9S2J3,TrEMBL:F6HPJ7;Derives_from=GSCOCT00032100001;Name=Cc11_g14140;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.7.11.7,PRODUCT:Putative Uncharacterized WD repeat-containing protein alr3466,CC_functional_completeness:complete,CC_gene:alr3466,CC_gene:all2124,CC_gene:HET-E1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032100001~ Putative Uncharacterized WD repeat-containing protein alr3466~ alr3466~ complete;original_location=complement(519999..521273);owner=coffea | |
| 71294 chr11 manual_curation exon 30821393 30822667 . + . Parent=GSCOCT00032100001 | |
| 71295 chr11 manual_curation CDS 30821393 30822667 . + 0 Parent=GSCOCT00032100001 | |
| 71296 chr11 manual_curation gene 30838214 30842396 . + . ID=GSCOCG00032098001;Name=Cc11_g14150 | |
| 71297 chr11 manual_curation mRNA 30838214 30842396 . + . ID=GSCOCT00032098001;Parent=GSCOCG00032098001;Name=Cc11_g14150 | |
| 71298 chr11 manual_curation polypeptide 30838437 30841978 . + . ID=GSCOCP00032098001;Dbxref=InterPro:IPR001660,InterPro:IPR010993,InterPro:IPR021129,PFAM:PF00536,PROFILE:PS50105,SMART:SM00454,SUPERFAMILY:SSF47769,TAIR:AT1G70180.2,TAIR:AT3G07170.1,TAIR:AT5G48680.1,TrEMBL:B9HLW2,TrEMBL:B9S2J4,TrEMBL:I1JBX6;Derives_from=GSCOCT00032098001;Name=Cc11_g14150;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Sterile alpha motif (SAM) domain-containing protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032098001~ Putative Sterile alpha motif (SAM) domain-containing protein~ unknown_gene~ complete;original_location=complement(join(504176..504229%2C503899..504035%2C503622..503674%2C502762..503519%2C502185..502265%2C501501..501563%2C500688..500744));owner=coffea | |
| 71299 chr11 manual_curation exon 30841922 30842396 . + . Parent=GSCOCT00032098001 | |
| 71300 chr11 manual_curation exon 30841103 30841165 . + . Parent=GSCOCT00032098001 | |
| 71301 chr11 manual_curation exon 30840401 30840481 . + . Parent=GSCOCT00032098001 | |
| 71302 chr11 manual_curation exon 30839147 30839904 . + . Parent=GSCOCT00032098001 | |
| 71303 chr11 manual_curation exon 30838992 30839044 . + . Parent=GSCOCT00032098001 | |
| 71304 chr11 manual_curation exon 30838631 30838767 . + . Parent=GSCOCT00032098001 | |
| 71305 chr11 manual_curation exon 30838214 30838490 . + . Parent=GSCOCT00032098001 | |
| 71306 chr11 manual_curation CDS 30841922 30841978 . + 0 Parent=GSCOCT00032098001 | |
| 71307 chr11 manual_curation CDS 30841103 30841165 . + 0 Parent=GSCOCT00032098001 | |
| 71308 chr11 manual_curation CDS 30840401 30840481 . + 0 Parent=GSCOCT00032098001 | |
| 71309 chr11 manual_curation CDS 30839147 30839904 . + 1 Parent=GSCOCT00032098001 | |
| 71310 chr11 manual_curation CDS 30838992 30839044 . + 2 Parent=GSCOCT00032098001 | |
| 71311 chr11 manual_curation CDS 30838631 30838767 . + 0 Parent=GSCOCT00032098001 | |
| 71312 chr11 manual_curation CDS 30838437 30838490 . + 0 Parent=GSCOCT00032098001 | |
| 71313 chr11 manual_curation gene 30848693 30849475 . + . ID=GSCOCG00032097001;Name=Cc11_g14160 | |
| 71314 chr11 manual_curation mRNA 30848693 30849475 . + . ID=GSCOCT00032097001;Parent=GSCOCG00032097001;Name=Cc11_g14160 | |
| 71315 chr11 manual_curation polypeptide 30848693 30849475 . + . ID=GSCOCP00032097001;Dbxref=InterPro:IPR007087,PROFILE:PS50157,PROSITE:PS00028,TAIR:AT1G10480.1,TAIR:AT1G68360.1,TrEMBL:B9HMT4,TrEMBL:B9S2J5,TrEMBL:D7TNK9;Derives_from=GSCOCT00032097001;Name=Cc11_g14160;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032097001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=complement(493191..493973);owner=coffea | |
| 71316 chr11 manual_curation exon 30848693 30849475 . + . Parent=GSCOCT00032097001 | |
| 71317 chr11 manual_curation CDS 30848693 30849475 . + 0 Parent=GSCOCT00032097001 | |
| 71318 chr11 manual_curation gene 30856432 30861198 . + . ID=GSCOCG00032095001;Name=Cc11_g14170 | |
| 71319 chr11 manual_curation mRNA 30856432 30861198 . + . ID=GSCOCT00032095001;Parent=GSCOCG00032095001;Name=Cc11_g14170 | |
| 71320 chr11 manual_curation polypeptide 30856432 30860859 . + . ID=GSCOCP00032095001;Dbxref=GENE3D:G3DSA:1.10.287.110,InterPro:IPR001623,InterPro:IPR003095,InterPro:IPR015609,InterPro:IPR018253,PANTHER:PTHR11821,PFAM:PF00226,PRINTS:PR00625,PROFILE:PS50076,PROSITE:PS00636,SMART:SM00271,SUPERFAMILY:SSF46565,SwissProt:Q6XL73,SwissProt:Q8VXV4,SwissProt:Q9ZSY2,TAIR:AT1G24120.1,TAIR:AT1G59980.1,TAIR:AT1G68370.1,TrEMBL:A5B210,TrEMBL:D7TNL0,TrEMBL:I1J5E6;Derives_from=GSCOCT00032095001;Name=Cc11_g14170;Ontology_term=CC_evidence_code:ISS,GO:0006457,GO:0031072,GO:0051082,CC_EC_number:missing_EC_number,PRODUCT:Chaperone protein dnaJ 16,CC_functional_completeness:complete,CC_gene:ATJ16,CC_gene:ATJ39,CC_gene:ATJ15;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032095001~ Chaperone protein dnaJ 16~ ATJ16~ complete;original_location=complement(join(486098..486234%2C484867..484990%2C484659..484741%2C484426..484537%2C484242..484346%2C483195..483245%2C482730..482819%2C482530..482638%2C482277..482425%2C482145..482198%2C481807..482025));owner=coffea | |
| 71321 chr11 manual_curation exon 30860641 30861198 . + . Parent=GSCOCT00032095001 | |
| 71322 chr11 manual_curation exon 30860468 30860521 . + . Parent=GSCOCT00032095001 | |
| 71323 chr11 manual_curation exon 30860241 30860389 . + . Parent=GSCOCT00032095001 | |
| 71324 chr11 manual_curation exon 30860028 30860136 . + . Parent=GSCOCT00032095001 | |
| 71325 chr11 manual_curation exon 30859847 30859936 . + . Parent=GSCOCT00032095001 | |
| 71326 chr11 manual_curation exon 30859421 30859471 . + . Parent=GSCOCT00032095001 | |
| 71327 chr11 manual_curation exon 30858320 30858424 . + . Parent=GSCOCT00032095001 | |
| 71328 chr11 manual_curation exon 30858129 30858240 . + . Parent=GSCOCT00032095001 | |
| 71329 chr11 manual_curation exon 30857925 30858007 . + . Parent=GSCOCT00032095001 | |
| 71330 chr11 manual_curation exon 30857676 30857799 . + . Parent=GSCOCT00032095001 | |
| 71331 chr11 manual_curation exon 30856432 30856568 . + . Parent=GSCOCT00032095001 | |
| 71332 chr11 manual_curation CDS 30860641 30860859 . + 0 Parent=GSCOCT00032095001 | |
| 71333 chr11 manual_curation CDS 30860468 30860521 . + 0 Parent=GSCOCT00032095001 | |
| 71334 chr11 manual_curation CDS 30860241 30860389 . + 1 Parent=GSCOCT00032095001 | |
| 71335 chr11 manual_curation CDS 30860028 30860136 . + 0 Parent=GSCOCT00032095001 | |
| 71336 chr11 manual_curation CDS 30859847 30859936 . + 0 Parent=GSCOCT00032095001 | |
| 71337 chr11 manual_curation CDS 30859421 30859471 . + 0 Parent=GSCOCT00032095001 | |
| 71338 chr11 manual_curation CDS 30858320 30858424 . + 0 Parent=GSCOCT00032095001 | |
| 71339 chr11 manual_curation CDS 30858129 30858240 . + 2 Parent=GSCOCT00032095001 | |
| 71340 chr11 manual_curation CDS 30857925 30858007 . + 0 Parent=GSCOCT00032095001 | |
| 71341 chr11 manual_curation CDS 30857676 30857799 . + 2 Parent=GSCOCT00032095001 | |
| 71342 chr11 manual_curation CDS 30856432 30856568 . + 0 Parent=GSCOCT00032095001 | |
| 71343 chr11 manual_curation gene 30861712 30862707 . - . ID=GSCOCG00032094001;Name=Cc11_g14180 | |
| 71344 chr11 manual_curation mRNA 30861712 30862707 . - . ID=GSCOCT00032094001;Parent=GSCOCG00032094001;Name=Cc11_g14180 | |
| 71345 chr11 manual_curation polypeptide 30861712 30862707 . - . ID=GSCOCP00032094001;Dbxref=InterPro:IPR000823,InterPro:IPR002016,InterPro:IPR010255,InterPro:IPR019793,InterPro:IPR019794,PFAM:PF00141,PRINTS:PR00458,PRINTS:PR00461,PROFILE:PS50873,PROSITE:PS00435,PROSITE:PS00436,SUPERFAMILY:SSF48113,SwissProt:O48677,SwissProt:Q9FJR1,SwissProt:Q9LHA7,TAIR:AT1G24110.1,TAIR:AT3G28200.1,TAIR:AT5G47000.1,TrEMBL:A5B211,TrEMBL:B9HMT7,TrEMBL:F6HPJ9;Derives_from=GSCOCT00032094001;Name=Cc11_g14180;Ontology_term=CC_evidence_code:ISS,GO:0004601,GO:0006979,GO:0020037,GO:0055114,CC_EC_number:1.11.1.7,PRODUCT:Peroxidase 6,CC_functional_completeness:complete,CC_gene:PER6,CC_gene:PER31,CC_gene:PER65;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032094001~ Peroxidase 6~ PER6~ complete;original_location=479959..480954;owner=coffea | |
| 71346 chr11 manual_curation exon 30861712 30862707 . - . Parent=GSCOCT00032094001 | |
| 71347 chr11 manual_curation CDS 30861712 30862707 . - 0 Parent=GSCOCT00032094001 | |
| 71348 chr11 manual_curation gene 30863494 30866365 . + . ID=GSCOCG00032093001;Name=Cc11_g14190 | |
| 71349 chr11 manual_curation mRNA 30863494 30866365 . + . ID=GSCOCT00032093001;Parent=GSCOCG00032093001;Name=Cc11_g14190 | |
| 71350 chr11 manual_curation polypeptide 30863742 30866119 . + . ID=GSCOCP00032093001;Dbxref=InterPro:IPR002933,InterPro:IPR010168,InterPro:IPR011650,InterPro:IPR017439,PFAM:PF01546,PFAM:PF07687,PIR:PIRSF005962,SUPERFAMILY:SSF55031,SwissProt:O04373,SwissProt:P54970,SwissProt:Q84XG9,TAIR:AT1G51760.1,TAIR:AT5G56650.1,TAIR:AT5G56660.1,TIGRFAMs:TIGR01891,TrEMBL:B9HMT9,TrEMBL:B9S2J7,TrEMBL:F6HPK0;Derives_from=GSCOCT00032093001;Name=Cc11_g14190;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008152,GO:0016787,CC_EC_number:3.5.1.32,PRODUCT:IAA-amino acid hydrolase ILR1-like 2,CC_functional_completeness:complete,CC_gene:ILL2,CC_gene:ILL4,CC_gene:ILL1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032093001~ IAA-amino acid hydrolase ILR1-like 2~ ILL2~ complete;original_location=complement(join(478523..478924%2C477669..477794%2C477262..477576%2C477018..477146%2C476547..476927));owner=coffea | |
| 71351 chr11 manual_curation exon 30865739 30866365 . + . Parent=GSCOCT00032093001 | |
| 71352 chr11 manual_curation exon 30865520 30865648 . + . Parent=GSCOCT00032093001 | |
| 71353 chr11 manual_curation exon 30865090 30865404 . + . Parent=GSCOCT00032093001 | |
| 71354 chr11 manual_curation exon 30864872 30864997 . + . Parent=GSCOCT00032093001 | |
| 71355 chr11 manual_curation exon 30863494 30864143 . + . Parent=GSCOCT00032093001 | |
| 71356 chr11 manual_curation CDS 30865739 30866119 . + 0 Parent=GSCOCT00032093001 | |
| 71357 chr11 manual_curation CDS 30865520 30865648 . + 0 Parent=GSCOCT00032093001 | |
| 71358 chr11 manual_curation CDS 30865090 30865404 . + 0 Parent=GSCOCT00032093001 | |
| 71359 chr11 manual_curation CDS 30864872 30864997 . + 0 Parent=GSCOCT00032093001 | |
| 71360 chr11 manual_curation CDS 30863742 30864143 . + 0 Parent=GSCOCT00032093001 | |
| 71361 chr11 manual_curation gene 30869541 30876752 . + . ID=GSCOCG00032091001;Name=Cc11_g14200 | |
| 71362 chr11 manual_curation mRNA 30869541 30876752 . + . ID=GSCOCT00032091001;Parent=GSCOCG00032091001;Name=Cc11_g14200 | |
| 71363 chr11 manual_curation polypeptide 30869659 30876550 . + . ID=GSCOCP00032091001;Dbxref=InterPro:IPR001611,InterPro:IPR003590,PFAM:PF00560,SMART:SM00368,SwissProt:P10775,SwissProt:Q5DU56,SwissProt:Q7RTR2,TAIR:AT1G10510.1,TAIR:AT3G63130.1,TAIR:AT5G19320.1,TrEMBL:B9S2J9,TrEMBL:C9E9W2,TrEMBL:Q93ZV8;Derives_from=GSCOCT00032091001;Name=Cc11_g14200;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein NLRC3,CC_functional_completeness:complete,CC_gene:NLRC3,CC_gene:Nlrc3,CC_gene:RNH1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032091001~ Putative Protein NLRC3~ NLRC3~ complete;original_location=complement(join(472966..473007%2C472550..472850%2C471142..471351%2C470691..470749%2C470372..470509%2C469567..469641%2C469367..469450%2C469207..469268%2C468921..468990%2C467984..468059%2C467773..467903%2C467195..467254%2C467013..467087%2C466817..466921%2C466650..466745%2C466460..466540%2C466276..466377%2C466116..466184));owner=coffea | |
| 71364 chr11 manual_curation exon 30876482 30876752 . + . Parent=GSCOCT00032091001 | |
| 71365 chr11 manual_curation exon 30876289 30876390 . + . Parent=GSCOCT00032091001 | |
| 71366 chr11 manual_curation exon 30876126 30876206 . + . Parent=GSCOCT00032091001 | |
| 71367 chr11 manual_curation exon 30875921 30876016 . + . Parent=GSCOCT00032091001 | |
| 71368 chr11 manual_curation exon 30875745 30875849 . + . Parent=GSCOCT00032091001 | |
| 71369 chr11 manual_curation exon 30875579 30875653 . + . Parent=GSCOCT00032091001 | |
| 71370 chr11 manual_curation exon 30875412 30875471 . + . Parent=GSCOCT00032091001 | |
| 71371 chr11 manual_curation exon 30874763 30874893 . + . Parent=GSCOCT00032091001 | |
| 71372 chr11 manual_curation exon 30874607 30874682 . + . Parent=GSCOCT00032091001 | |
| 71373 chr11 manual_curation exon 30873676 30873745 . + . Parent=GSCOCT00032091001 | |
| 71374 chr11 manual_curation exon 30873398 30873459 . + . Parent=GSCOCT00032091001 | |
| 71375 chr11 manual_curation exon 30873216 30873299 . + . Parent=GSCOCT00032091001 | |
| 71376 chr11 manual_curation exon 30873025 30873099 . + . Parent=GSCOCT00032091001 | |
| 71377 chr11 manual_curation exon 30872157 30872294 . + . Parent=GSCOCT00032091001 | |
| 71378 chr11 manual_curation exon 30871917 30871975 . + . Parent=GSCOCT00032091001 | |
| 71379 chr11 manual_curation exon 30871315 30871524 . + . Parent=GSCOCT00032091001 | |
| 71380 chr11 manual_curation exon 30869816 30870116 . + . Parent=GSCOCT00032091001 | |
| 71381 chr11 manual_curation exon 30869541 30869700 . + . Parent=GSCOCT00032091001 | |
| 71382 chr11 manual_curation CDS 30876482 30876550 . + 0 Parent=GSCOCT00032091001 | |
| 71383 chr11 manual_curation CDS 30876289 30876390 . + 0 Parent=GSCOCT00032091001 | |
| 71384 chr11 manual_curation CDS 30876126 30876206 . + 0 Parent=GSCOCT00032091001 | |
| 71385 chr11 manual_curation CDS 30875921 30876016 . + 0 Parent=GSCOCT00032091001 | |
| 71386 chr11 manual_curation CDS 30875745 30875849 . + 0 Parent=GSCOCT00032091001 | |
| 71387 chr11 manual_curation CDS 30875579 30875653 . + 0 Parent=GSCOCT00032091001 | |
| 71388 chr11 manual_curation CDS 30875412 30875471 . + 0 Parent=GSCOCT00032091001 | |
| 71389 chr11 manual_curation CDS 30874763 30874893 . + 1 Parent=GSCOCT00032091001 | |
| 71390 chr11 manual_curation CDS 30874607 30874682 . + 0 Parent=GSCOCT00032091001 | |
| 71391 chr11 manual_curation CDS 30873676 30873745 . + 2 Parent=GSCOCT00032091001 | |
| 71392 chr11 manual_curation CDS 30873398 30873459 . + 0 Parent=GSCOCT00032091001 | |
| 71393 chr11 manual_curation CDS 30873216 30873299 . + 0 Parent=GSCOCT00032091001 | |
| 71394 chr11 manual_curation CDS 30873025 30873099 . + 0 Parent=GSCOCT00032091001 | |
| 71395 chr11 manual_curation CDS 30872157 30872294 . + 0 Parent=GSCOCT00032091001 | |
| 71396 chr11 manual_curation CDS 30871917 30871975 . + 1 Parent=GSCOCT00032091001 | |
| 71397 chr11 manual_curation CDS 30871315 30871524 . + 1 Parent=GSCOCT00032091001 | |
| 71398 chr11 manual_curation CDS 30869816 30870116 . + 0 Parent=GSCOCT00032091001 | |
| 71399 chr11 manual_curation CDS 30869659 30869700 . + 0 Parent=GSCOCT00032091001 | |
| 71400 chr11 manual_curation gene 30896134 30897678 . + . ID=GSCOCG00032088001;Name=Cc11_g14210 | |
| 71401 chr11 manual_curation mRNA 30896134 30897678 . + . ID=GSCOCT00032088001;Parent=GSCOCG00032088001;Name=Cc11_g14210 | |
| 71402 chr11 manual_curation polypeptide 30896134 30897678 . + . ID=GSCOCP00032088001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,PROSITE:PS00375,SwissProt:O22820,SwissProt:O22822,SwissProt:O48676,TAIR:AT1G24100.1,TAIR:AT2G43820.1,TAIR:AT2G43840.2,TrEMBL:A5B769,TrEMBL:B6EWY3,TrEMBL:F6HPK7;Derives_from=GSCOCT00032088001;Name=Cc11_g14210;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.121,PRODUCT:UDP-glycosyltransferase 74B1,CC_functional_completeness:complete,CC_gene:UGT74B1,CC_gene:UGT74F1,CC_gene:UGT74F2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032088001~ UDP-glycosyltransferase 74B1~ UGT74B1~ complete;original_location=complement(join(446249..446532%2C445894..446173%2C444988..445728));owner=coffea | |
| 71403 chr11 manual_curation exon 30896938 30897678 . + . Parent=GSCOCT00032088001 | |
| 71404 chr11 manual_curation exon 30896493 30896772 . + . Parent=GSCOCT00032088001 | |
| 71405 chr11 manual_curation exon 30896134 30896417 . + . Parent=GSCOCT00032088001 | |
| 71406 chr11 manual_curation CDS 30896938 30897678 . + 0 Parent=GSCOCT00032088001 | |
| 71407 chr11 manual_curation CDS 30896493 30896772 . + 2 Parent=GSCOCT00032088001 | |
| 71408 chr11 manual_curation CDS 30896134 30896417 . + 0 Parent=GSCOCT00032088001 | |
| 71409 chr11 manual_curation gene 30897791 30903205 . - . ID=GSCOCG00032087001;Name=Cc11_g14220 | |
| 71410 chr11 manual_curation mRNA 30897791 30903205 . - . ID=GSCOCT00032087001;Parent=GSCOCG00032087001;Name=Cc11_g14220 | |
| 71411 chr11 manual_curation polypeptide 30898291 30902869 . - . ID=GSCOCP00032087001;Dbxref=InterPro:IPR001650,InterPro:IPR011545,InterPro:IPR014001,InterPro:IPR014014,InterPro:IPR014021,PFAM:PF00270,PFAM:PF00271,PROFILE:PS51192,PROFILE:PS51194,PROFILE:PS51195,SMART:SM00487,SMART:SM00490,SwissProt:Q0DVX2,SwissProt:Q6H601,SwissProt:Q944S1,TAIR:AT1G59990.1,TAIR:AT4G09730.1,TAIR:AT4G34910.1,TrEMBL:B9HLW7,TrEMBL:D7TNM5,TrEMBL:G7LEQ4;Derives_from=GSCOCT00032087001;Name=Cc11_g14220;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0004386,GO:0005524,GO:0008026,CC_EC_number:missing_EC_number,PRODUCT:DEAD-box ATP-dependent RNA helicase 22,CC_functional_completeness:complete,CC_gene:Os09g0383400,CC_gene:RH22,CC_gene:Os03g0108600;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032087001~ DEAD-box ATP-dependent RNA helicase 22~ Os09g0383400~ complete;original_location=join(439797..440126%2C440443..440730%2C440909..441031%2C441115..441554%2C442406..442730%2C443638..443790%2C444087..444138%2C444332..444375);owner=coffea | |
| 71412 chr11 manual_curation exon 30897791 30898145 . - . Parent=GSCOCT00032087001 | |
| 71413 chr11 manual_curation exon 30902540 30903205 . - . Parent=GSCOCT00032087001 | |
| 71414 chr11 manual_curation exon 30901936 30902223 . - . Parent=GSCOCT00032087001 | |
| 71415 chr11 manual_curation exon 30901635 30901757 . - . Parent=GSCOCT00032087001 | |
| 71416 chr11 manual_curation exon 30901112 30901551 . - . Parent=GSCOCT00032087001 | |
| 71417 chr11 manual_curation exon 30899936 30900260 . - . Parent=GSCOCT00032087001 | |
| 71418 chr11 manual_curation exon 30898876 30899028 . - . Parent=GSCOCT00032087001 | |
| 71419 chr11 manual_curation exon 30898528 30898579 . - . Parent=GSCOCT00032087001 | |
| 71420 chr11 manual_curation exon 30898281 30898334 . - . Parent=GSCOCT00032087001 | |
| 71421 chr11 manual_curation CDS 30902540 30902869 . - 0 Parent=GSCOCT00032087001 | |
| 71422 chr11 manual_curation CDS 30901936 30902223 . - 0 Parent=GSCOCT00032087001 | |
| 71423 chr11 manual_curation CDS 30901635 30901757 . - 0 Parent=GSCOCT00032087001 | |
| 71424 chr11 manual_curation CDS 30901112 30901551 . - 0 Parent=GSCOCT00032087001 | |
| 71425 chr11 manual_curation CDS 30899936 30900260 . - 2 Parent=GSCOCT00032087001 | |
| 71426 chr11 manual_curation CDS 30898876 30899028 . - 0 Parent=GSCOCT00032087001 | |
| 71427 chr11 manual_curation CDS 30898528 30898579 . - 0 Parent=GSCOCT00032087001 | |
| 71428 chr11 manual_curation CDS 30898291 30898334 . - 1 Parent=GSCOCT00032087001 | |
| 71429 chr11 manual_curation gene 30903327 30906372 . + . ID=GSCOCG00032086001;Name=Cc11_g14230 | |
| 71430 chr11 manual_curation mRNA 30903327 30906372 . + . ID=GSCOCT00032086001;Parent=GSCOCG00032086001;Name=Cc11_g14230 | |
| 71431 chr11 manual_curation polypeptide 30903384 30906372 . + . ID=GSCOCP00032086001;Dbxref=GENE3D:G3DSA:1.10.150.110,InterPro:IPR001357,InterPro:IPR002008,InterPro:IPR002054,InterPro:IPR010996,InterPro:IPR018944,PFAM:PF00533,PFAM:PF10391,PRINTS:PR00870,PROFILE:PS50172,SMART:SM00292,SMART:SM00483,SUPERFAMILY:SSF47802,SUPERFAMILY:SSF52113,SUPERFAMILY:SSF81585,SwissProt:P06766,SwissProt:Q5RKI3,SwissProt:Q9QXE2,TAIR:AT1G10520.1,TrEMBL:D7TNM4,TrEMBL:G7KDW6,TrEMBL:I1JCZ1;Derives_from=GSCOCT00032086001;Name=Cc11_g14230;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003824,GO:0003887,GO:0005622,GO:0006260,GO:0006281,CC_EC_number:2.7.7.31,PRODUCT:Putative DNA polymerase lambda,CC_functional_completeness:fragment,CC_gene:Poll,CC_gene:Polb;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032086001~ Putative DNA polymerase lambda~ Poll~ fragment;original_location=complement(join(439142..439282%2C438882..439019%2C438116..438469%2C437837..437930%2C437610..437740%2C437110..437172%2C436294..436527));owner=coffea | |
| 71432 chr11 manual_curation exon 30906139 30906372 . + . Parent=GSCOCT00032086001 | |
| 71433 chr11 manual_curation exon 30905494 30905556 . + . Parent=GSCOCT00032086001 | |
| 71434 chr11 manual_curation exon 30904926 30905056 . + . Parent=GSCOCT00032086001 | |
| 71435 chr11 manual_curation exon 30904736 30904829 . + . Parent=GSCOCT00032086001 | |
| 71436 chr11 manual_curation exon 30904197 30904550 . + . Parent=GSCOCT00032086001 | |
| 71437 chr11 manual_curation exon 30903647 30903784 . + . Parent=GSCOCT00032086001 | |
| 71438 chr11 manual_curation exon 30903327 30903524 . + . Parent=GSCOCT00032086001 | |
| 71439 chr11 manual_curation CDS 30906139 30906372 . + 0 Parent=GSCOCT00032086001 | |
| 71440 chr11 manual_curation CDS 30905494 30905556 . + 0 Parent=GSCOCT00032086001 | |
| 71441 chr11 manual_curation CDS 30904926 30905056 . + 1 Parent=GSCOCT00032086001 | |
| 71442 chr11 manual_curation CDS 30904736 30904829 . + 0 Parent=GSCOCT00032086001 | |
| 71443 chr11 manual_curation CDS 30904197 30904550 . + 0 Parent=GSCOCT00032086001 | |
| 71444 chr11 manual_curation CDS 30903647 30903784 . + 0 Parent=GSCOCT00032086001 | |
| 71445 chr11 manual_curation CDS 30903384 30903524 . + 0 Parent=GSCOCT00032086001 | |
| 71446 chr11 manual_curation gene 30906466 30910878 . + . ID=GSCOCG00032085001;Name=Cc11_g14240 | |
| 71447 chr11 manual_curation mRNA 30906466 30910878 . + . ID=GSCOCT00032085001;Parent=GSCOCG00032085001;Name=Cc11_g14240 | |
| 71448 chr11 manual_curation polypeptide 30906466 30910525 . + . ID=GSCOCP00032085001;Dbxref=InterPro:IPR002008,InterPro:IPR002054,InterPro:IPR002934,InterPro:IPR019843,InterPro:IPR022312,PFAM:PF01909,PRINTS:PR00869,PRINTS:PR00870,PROSITE:PS00522,SMART:SM00483,SwissProt:Q4R380,SwissProt:Q5RKI3,SwissProt:Q9UGP5,TAIR:AT1G10520.1,TrEMBL:B9HVB4,TrEMBL:D7TNM4,TrEMBL:I1JCZ1;Derives_from=GSCOCT00032085001;Name=Cc11_g14240;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003887,GO:0006260,GO:0006281,GO:0016779,CC_EC_number:2.7.7.7,CC_EC_number:2.7.7.7,PRODUCT:Putative DNA polymerase lambda,CC_functional_completeness:fragment,CC_gene:POLL,CC_gene:Poll;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032085001~ Putative DNA polymerase lambda~ POLL~ fragment;original_location=complement(join(436156..436200%2C435178..435266%2C434768..434858%2C434057..434137%2C433543..433610%2C432314..432398%2C432141..432236));owner=coffea | |
| 71449 chr11 manual_curation exon 30910430 30910878 . + . Parent=GSCOCT00032085001 | |
| 71450 chr11 manual_curation exon 30910268 30910352 . + . Parent=GSCOCT00032085001 | |
| 71451 chr11 manual_curation exon 30909056 30909123 . + . Parent=GSCOCT00032085001 | |
| 71452 chr11 manual_curation exon 30908529 30908609 . + . Parent=GSCOCT00032085001 | |
| 71453 chr11 manual_curation exon 30907808 30907898 . + . Parent=GSCOCT00032085001 | |
| 71454 chr11 manual_curation exon 30907400 30907488 . + . Parent=GSCOCT00032085001 | |
| 71455 chr11 manual_curation exon 30906466 30906510 . + . Parent=GSCOCT00032085001 | |
| 71456 chr11 manual_curation CDS 30910430 30910525 . + 0 Parent=GSCOCT00032085001 | |
| 71457 chr11 manual_curation CDS 30910268 30910352 . + 2 Parent=GSCOCT00032085001 | |
| 71458 chr11 manual_curation CDS 30909056 30909123 . + 0 Parent=GSCOCT00032085001 | |
| 71459 chr11 manual_curation CDS 30908529 30908609 . + 0 Parent=GSCOCT00032085001 | |
| 71460 chr11 manual_curation CDS 30907808 30907898 . + 2 Parent=GSCOCT00032085001 | |
| 71461 chr11 manual_curation CDS 30907400 30907488 . + 0 Parent=GSCOCT00032085001 | |
| 71462 chr11 manual_curation CDS 30906466 30906510 . + 0 Parent=GSCOCT00032085001 | |
| 71463 chr11 manual_curation gene 30914977 30917982 . - . ID=GSCOCG00032083001;Name=Cc11_g14250 | |
| 71464 chr11 manual_curation mRNA 30914977 30917982 . - . ID=GSCOCT00032083001;Parent=GSCOCG00032083001;Name=Cc11_g14250 | |
| 71465 chr11 manual_curation polypeptide 30915498 30917982 . - . ID=GSCOCP00032083001;Dbxref=InterPro:IPR007263,PFAM:PF04134,SwissProt:P40761,SwissProt:Q9SSR1,TAIR:AT1G24095.1,TAIR:AT1G52590.1,TrEMBL:A5B0T4,TrEMBL:B9T8F7,TrEMBL:D7TNM2;Derives_from=GSCOCT00032083001;Name=Cc11_g14250;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized protein yuxK,CC_functional_completeness:modules,CC_gene:yuxK,CC_gene:At1g52590;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032083001~ Putative Uncharacterized protein yuxK~ yuxK~ modules;original_location=join(424684..424936%2C425664..425831%2C426945..427168);owner=coffea | |
| 71466 chr11 manual_curation exon 30917730 30917982 . - . Parent=GSCOCT00032083001 | |
| 71467 chr11 manual_curation exon 30916835 30917002 . - . Parent=GSCOCT00032083001 | |
| 71468 chr11 manual_curation exon 30914977 30915721 . - . Parent=GSCOCT00032083001 | |
| 71469 chr11 manual_curation CDS 30917730 30917982 . - 0 Parent=GSCOCT00032083001 | |
| 71470 chr11 manual_curation CDS 30916835 30917002 . - 1 Parent=GSCOCT00032083001 | |
| 71471 chr11 manual_curation CDS 30915498 30915721 . - 1 Parent=GSCOCT00032083001 | |
| 71472 chr11 manual_curation gene 30918472 30922587 . - . ID=GSCOCG00032082001;Name=Cc11_g14260 | |
| 71473 chr11 manual_curation mRNA 30918472 30922587 . - . ID=GSCOCT00032082001;Parent=GSCOCG00032082001;Name=Cc11_g14260 | |
| 71474 chr11 manual_curation polypeptide 30918546 30922587 . - . ID=GSCOCP00032082001;Dbxref=InterPro:IPR002893,PFAM:PF01753,SwissProt:Q8C0R7,SwissProt:Q9H091,TAIR:AT1G70150.1,TrEMBL:D7TNK4,TrEMBL:F4I3Y1,TrEMBL:I1J5F5;Derives_from=GSCOCT00032082001;Name=Cc11_g14260;Ontology_term=CC_evidence_code:ISS,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative Zinc finger MYND domain-containing protein 15,CC_functional_completeness:fragment,CC_gene:Zmynd15,CC_gene:ZMYND15;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032082001~ Putative Zinc finger MYND domain-containing protein 15~ Zmynd15~ fragment;original_location=join(420079..420180%2C420740..420853%2C420946..421064%2C421657..421703%2C421790..421890%2C422097..422184%2C422731..422839%2C423362..423527%2C423613..423684%2C423831..423944%2C424028..424120);owner=coffea | |
| 71475 chr11 manual_curation exon 30922486 30922587 . - . Parent=GSCOCT00032082001 | |
| 71476 chr11 manual_curation exon 30921813 30921926 . - . Parent=GSCOCT00032082001 | |
| 71477 chr11 manual_curation exon 30921602 30921720 . - . Parent=GSCOCT00032082001 | |
| 71478 chr11 manual_curation exon 30920963 30921009 . - . Parent=GSCOCT00032082001 | |
| 71479 chr11 manual_curation exon 30920776 30920876 . - . Parent=GSCOCT00032082001 | |
| 71480 chr11 manual_curation exon 30920482 30920569 . - . Parent=GSCOCT00032082001 | |
| 71481 chr11 manual_curation exon 30919827 30919935 . - . Parent=GSCOCT00032082001 | |
| 71482 chr11 manual_curation exon 30919139 30919304 . - . Parent=GSCOCT00032082001 | |
| 71483 chr11 manual_curation exon 30918982 30919053 . - . Parent=GSCOCT00032082001 | |
| 71484 chr11 manual_curation exon 30918722 30918835 . - . Parent=GSCOCT00032082001 | |
| 71485 chr11 manual_curation exon 30918472 30918638 . - . Parent=GSCOCT00032082001 | |
| 71486 chr11 manual_curation CDS 30922486 30922587 . - 0 Parent=GSCOCT00032082001 | |
| 71487 chr11 manual_curation CDS 30921813 30921926 . - 0 Parent=GSCOCT00032082001 | |
| 71488 chr11 manual_curation CDS 30921602 30921720 . - 0 Parent=GSCOCT00032082001 | |
| 71489 chr11 manual_curation CDS 30920963 30921009 . - 2 Parent=GSCOCT00032082001 | |
| 71490 chr11 manual_curation CDS 30920776 30920876 . - 1 Parent=GSCOCT00032082001 | |
| 71491 chr11 manual_curation CDS 30920482 30920569 . - 0 Parent=GSCOCT00032082001 | |
| 71492 chr11 manual_curation CDS 30919827 30919935 . - 1 Parent=GSCOCT00032082001 | |
| 71493 chr11 manual_curation CDS 30919139 30919304 . - 2 Parent=GSCOCT00032082001 | |
| 71494 chr11 manual_curation CDS 30918982 30919053 . - 0 Parent=GSCOCT00032082001 | |
| 71495 chr11 manual_curation CDS 30918722 30918835 . - 0 Parent=GSCOCT00032082001 | |
| 71496 chr11 manual_curation CDS 30918546 30918638 . - 0 Parent=GSCOCT00032082001 | |
| 71497 chr11 manual_curation gene 30923113 30926838 . - . ID=GSCOCG00032081001;Name=Cc11_g14270 | |
| 71498 chr11 manual_curation mRNA 30923113 30926838 . - . ID=GSCOCT00032081001;Parent=GSCOCG00032081001;Name=Cc11_g14270 | |
| 71499 chr11 manual_curation polypeptide 30923919 30925937 . - . ID=GSCOCP00032081001;Dbxref=InterPro:IPR006073,InterPro:IPR010674,InterPro:IPR012973,PFAM:PF06858,PFAM:PF08155,PRINTS:PR00326,SwissProt:Q9BZE4,SwissProt:Q9C6I8,SwissProt:Q9U6A9,TAIR:AT1G10300.1,TAIR:AT1G50920.1,TAIR:AT1G80770.1,TrEMBL:B9RIE0,TrEMBL:F6HBF8,TrEMBL:I1LJW2;Derives_from=GSCOCT00032081001;Name=Cc11_g14270;Ontology_term=CC_evidence_code:ISS,GO:0005525,CC_EC_number:missing_EC_number,PRODUCT:Nucleolar GTP-binding protein 1,CC_functional_completeness:complete,CC_gene:At1g50920,CC_gene:GTPBP4,CC_gene:NOG1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032081001~ Nucleolar GTP-binding protein 1~ At1g50920~ complete;original_location=416729..418747;owner=coffea | |
| 71500 chr11 manual_curation exon 30926699 30926838 . - . Parent=GSCOCT00032081001 | |
| 71501 chr11 manual_curation exon 30923113 30923666 . - . Parent=GSCOCT00032081001 | |
| 71502 chr11 manual_curation exon 30923909 30925960 . - . Parent=GSCOCT00032081001 | |
| 71503 chr11 manual_curation CDS 30923919 30925937 . - 0 Parent=GSCOCT00032081001 | |
| 71504 chr11 manual_curation gene 30930584 30933936 . - . ID=GSCOCG00032079001;Name=Cc11_g14280 | |
| 71505 chr11 manual_curation mRNA 30930584 30933936 . - . ID=GSCOCT00032079001;Parent=GSCOCG00032079001;Name=Cc11_g14280 | |
| 71506 chr11 manual_curation polypeptide 30931060 30933489 . - . ID=GSCOCP00032079001;Dbxref=InterPro:IPR000504,PROFILE:PS50102,TAIR:AT1G70200.1,TrEMBL:B9SZJ2,TrEMBL:I1J5E1,TrEMBL:I1JBY3;Derives_from=GSCOCT00032079001;Name=Cc11_g14280;Ontology_term=CC_evidence_code:ISS,GO:0003676,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein (Fragment),CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032079001~ Putative uncharacterized protein (Fragment)~ unknown_gene~ fragment;original_location=join(409177..409363%2C410466..410673%2C411037..411441%2C411519..411606);owner=coffea | |
| 71507 chr11 manual_curation exon 30933303 30933936 . - . Parent=GSCOCT00032079001 | |
| 71508 chr11 manual_curation exon 30931993 30932200 . - . Parent=GSCOCT00032079001 | |
| 71509 chr11 manual_curation exon 30931225 30931629 . - . Parent=GSCOCT00032079001 | |
| 71510 chr11 manual_curation exon 30930584 30931147 . - . Parent=GSCOCT00032079001 | |
| 71511 chr11 manual_curation CDS 30933303 30933489 . - 0 Parent=GSCOCT00032079001 | |
| 71512 chr11 manual_curation CDS 30931993 30932200 . - 1 Parent=GSCOCT00032079001 | |
| 71513 chr11 manual_curation CDS 30931225 30931629 . - 2 Parent=GSCOCT00032079001 | |
| 71514 chr11 manual_curation CDS 30931060 30931147 . - 2 Parent=GSCOCT00032079001 | |
| 71515 chr11 manual_curation gene 30950793 30954099 . + . ID=GSCOCG00032077001;Name=Cc11_g14290 | |
| 71516 chr11 manual_curation mRNA 30950793 30954099 . + . ID=GSCOCT00032077001;Parent=GSCOCG00032077001;Name=Cc11_g14290 | |
| 71517 chr11 manual_curation polypeptide 30950954 30954099 . + . ID=GSCOCP00032077001;Dbxref=GENE3D:G3DSA:1.10.472.10,InterPro:IPR004367,InterPro:IPR006670,InterPro:IPR006671,InterPro:IPR011028,InterPro:IPR013763,InterPro:IPR015451,PANTHER:PTHR10177:SF12,PFAM:PF00134,PFAM:PF02984,PROSITE:PS00292,SMART:SM00385,SUPERFAMILY:SSF47954,SwissProt:P42751,SwissProt:Q0J233,SwissProt:Q8H339,TAIR:AT1G70210.1,TAIR:AT2G22490.2,TAIR:AT5G65420.3,TrEMBL:D7TNL8,TrEMBL:G9BZU9,TrEMBL:I1JBY4;Derives_from=GSCOCT00032077001;Name=Cc11_g14290;Ontology_term=CC_evidence_code:ISS,GO:0005634,CC_EC_number:missing_EC_number,PRODUCT:Cyclin-D1-1,CC_functional_completeness:complete,CC_gene:CYCD1-1,CC_gene:CYCD2-1,CC_gene:CYCD1-2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032077001~ Cyclin-D1-1~ CYCD1-1~ complete;original_location=complement(join(391455..391712%2C390982..391068%2C389743..389841%2C389447..389648%2C389138..389268%2C388567..388815));owner=coffea | |
| 71518 chr11 manual_curation exon 30953851 30954099 . + . Parent=GSCOCT00032077001 | |
| 71519 chr11 manual_curation exon 30953398 30953528 . + . Parent=GSCOCT00032077001 | |
| 71520 chr11 manual_curation exon 30953018 30953219 . + . Parent=GSCOCT00032077001 | |
| 71521 chr11 manual_curation exon 30952825 30952923 . + . Parent=GSCOCT00032077001 | |
| 71522 chr11 manual_curation exon 30951598 30951684 . + . Parent=GSCOCT00032077001 | |
| 71523 chr11 manual_curation exon 30950793 30951211 . + . Parent=GSCOCT00032077001 | |
| 71524 chr11 manual_curation CDS 30953851 30954099 . + 0 Parent=GSCOCT00032077001 | |
| 71525 chr11 manual_curation CDS 30953398 30953528 . + 1 Parent=GSCOCT00032077001 | |
| 71526 chr11 manual_curation CDS 30953018 30953219 . + 0 Parent=GSCOCT00032077001 | |
| 71527 chr11 manual_curation CDS 30952825 30952923 . + 0 Parent=GSCOCT00032077001 | |
| 71528 chr11 manual_curation CDS 30951598 30951684 . + 0 Parent=GSCOCT00032077001 | |
| 71529 chr11 manual_curation CDS 30950954 30951211 . + 0 Parent=GSCOCT00032077001 | |
| 71530 chr11 manual_curation gene 30961847 30962902 . + . ID=GSCOCG00032075001;Name=Cc11_g14300 | |
| 71531 chr11 manual_curation mRNA 30961847 30962902 . + . ID=GSCOCT00032075001;Parent=GSCOCG00032075001;Name=Cc11_g14300 | |
| 71532 chr11 manual_curation polypeptide 30961847 30962902 . + . ID=GSCOCP00032075001;Dbxref=TrEMBL:B9SZI9,TrEMBL:D7TNL7;Derives_from=GSCOCT00032075001;Name=Cc11_g14300;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032075001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=complement(join(380601..380819%2C380321..380419%2C379764..379823));owner=coffea | |
| 71533 chr11 manual_curation exon 30962843 30962902 . + . Parent=GSCOCT00032075001 | |
| 71534 chr11 manual_curation exon 30962247 30962345 . + . Parent=GSCOCT00032075001 | |
| 71535 chr11 manual_curation exon 30961847 30962065 . + . Parent=GSCOCT00032075001 | |
| 71536 chr11 manual_curation CDS 30962843 30962902 . + 0 Parent=GSCOCT00032075001 | |
| 71537 chr11 manual_curation CDS 30962247 30962345 . + 0 Parent=GSCOCT00032075001 | |
| 71538 chr11 manual_curation CDS 30961847 30962065 . + 0 Parent=GSCOCT00032075001 | |
| 71539 chr11 manual_curation gene 30964501 30966708 . - . ID=GSCOCG00032073001;Name=Cc11_g14310 | |
| 71540 chr11 manual_curation mRNA 30964501 30966708 . - . ID=GSCOCT00032073001;Parent=GSCOCG00032073001;Name=Cc11_g14310 | |
| 71541 chr11 manual_curation polypeptide 30965275 30966456 . - . ID=GSCOCP00032073001;Dbxref=TAIR:AT1G10530.1,TAIR:AT1G60010.1,TAIR:AT5G50090.1,TrEMBL:B9HJS0,TrEMBL:D7TNL6,TrEMBL:I1J5D8;Derives_from=GSCOCT00032073001;Name=Cc11_g14310;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032073001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: N-terminal protein myristoylation%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10530.1)%3B Has 185 Blast hits to 185 proteins in 18 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 3%3B Plants - 180%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(376210..376474%2C376756..376907%2C377287..377391);owner=coffea | |
| 71542 chr11 manual_curation exon 30966192 30966708 . - . Parent=GSCOCT00032073001 | |
| 71543 chr11 manual_curation exon 30965759 30965910 . - . Parent=GSCOCT00032073001 | |
| 71544 chr11 manual_curation exon 30964501 30965379 . - . Parent=GSCOCT00032073001 | |
| 71545 chr11 manual_curation CDS 30966192 30966456 . - 0 Parent=GSCOCT00032073001 | |
| 71546 chr11 manual_curation CDS 30965759 30965910 . - 1 Parent=GSCOCT00032073001 | |
| 71547 chr11 manual_curation CDS 30965275 30965379 . - 0 Parent=GSCOCT00032073001 | |
| 71548 chr11 manual_curation gene 30976900 30981298 . - . ID=GSCOCG00032072001;Name=Cc11_g14320 | |
| 71549 chr11 manual_curation mRNA 30976900 30981298 . - . ID=GSCOCT00032072001;Parent=GSCOCG00032072001;Name=Cc11_g14320 | |
| 71550 chr11 manual_curation polypeptide 30977137 30981062 . - . ID=GSCOCP00032072001;Dbxref=InterPro:IPR006043,PANTHER:PTHR11119,PFAM:PF00860,SwissProt:Q0WPE9,SwissProt:Q27GI3,SwissProt:Q8VZQ5,TAIR:AT1G10540.1,TAIR:AT1G60030.1,TAIR:AT5G62890.1,TrEMBL:D7TNL5,TrEMBL:I1KXJ8,TrEMBL:I1N1D6;Derives_from=GSCOCT00032072001;Name=Cc11_g14320;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006810,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Nucleobase-ascorbate transporter 7,CC_functional_completeness:complete,CC_gene:NAT7,CC_gene:NAT6,CC_gene:NAT8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032072001~ Nucleobase-ascorbate transporter 7~ NAT7~ complete;original_location=join(361604..361721%2C362291..362388%2C362485..362661%2C362745..362845%2C363049..363124%2C363289..363348%2C363458..363642%2C363908..364004%2C364165..364251%2C364530..364588%2C364705..364796%2C364885..364962%2C365066..365226%2C365311..365529);owner=coffea | |
| 71551 chr11 manual_curation exon 30980945 30981298 . - . Parent=GSCOCT00032072001 | |
| 71552 chr11 manual_curation exon 30980278 30980375 . - . Parent=GSCOCT00032072001 | |
| 71553 chr11 manual_curation exon 30980005 30980181 . - . Parent=GSCOCT00032072001 | |
| 71554 chr11 manual_curation exon 30979821 30979921 . - . Parent=GSCOCT00032072001 | |
| 71555 chr11 manual_curation exon 30979542 30979617 . - . Parent=GSCOCT00032072001 | |
| 71556 chr11 manual_curation exon 30979318 30979377 . - . Parent=GSCOCT00032072001 | |
| 71557 chr11 manual_curation exon 30979024 30979208 . - . Parent=GSCOCT00032072001 | |
| 71558 chr11 manual_curation exon 30978662 30978758 . - . Parent=GSCOCT00032072001 | |
| 71559 chr11 manual_curation exon 30978415 30978501 . - . Parent=GSCOCT00032072001 | |
| 71560 chr11 manual_curation exon 30978078 30978136 . - . Parent=GSCOCT00032072001 | |
| 71561 chr11 manual_curation exon 30977870 30977961 . - . Parent=GSCOCT00032072001 | |
| 71562 chr11 manual_curation exon 30977704 30977781 . - . Parent=GSCOCT00032072001 | |
| 71563 chr11 manual_curation exon 30977440 30977600 . - . Parent=GSCOCT00032072001 | |
| 71564 chr11 manual_curation exon 30976900 30977355 . - . Parent=GSCOCT00032072001 | |
| 71565 chr11 manual_curation CDS 30980945 30981062 . - 0 Parent=GSCOCT00032072001 | |
| 71566 chr11 manual_curation CDS 30980278 30980375 . - 1 Parent=GSCOCT00032072001 | |
| 71567 chr11 manual_curation CDS 30980005 30980181 . - 0 Parent=GSCOCT00032072001 | |
| 71568 chr11 manual_curation CDS 30979821 30979921 . - 0 Parent=GSCOCT00032072001 | |
| 71569 chr11 manual_curation CDS 30979542 30979617 . - 2 Parent=GSCOCT00032072001 | |
| 71570 chr11 manual_curation CDS 30979318 30979377 . - 0 Parent=GSCOCT00032072001 | |
| 71571 chr11 manual_curation CDS 30979024 30979208 . - 0 Parent=GSCOCT00032072001 | |
| 71572 chr11 manual_curation CDS 30978662 30978758 . - 2 Parent=GSCOCT00032072001 | |
| 71573 chr11 manual_curation CDS 30978415 30978501 . - 0 Parent=GSCOCT00032072001 | |
| 71574 chr11 manual_curation CDS 30978078 30978136 . - 0 Parent=GSCOCT00032072001 | |
| 71575 chr11 manual_curation CDS 30977870 30977961 . - 2 Parent=GSCOCT00032072001 | |
| 71576 chr11 manual_curation CDS 30977704 30977781 . - 1 Parent=GSCOCT00032072001 | |
| 71577 chr11 manual_curation CDS 30977440 30977600 . - 1 Parent=GSCOCT00032072001 | |
| 71578 chr11 manual_curation CDS 30977137 30977355 . - 0 Parent=GSCOCT00032072001 | |
| 71579 chr11 manual_curation gene 30983247 30986940 . - . ID=GSCOCG00032071001;Name=Cc11_g14330 | |
| 71580 chr11 manual_curation mRNA 30983247 30986940 . - . ID=GSCOCT00032071001;Parent=GSCOCG00032071001;Name=Cc11_g14330 | |
| 71581 chr11 manual_curation polypeptide 30984329 30986861 . - . ID=GSCOCP00032071001;Dbxref=InterPro:IPR019181,PANTHER:PTHR13542,PFAM:PF09793,SwissProt:Q6NSN1,SwissProt:Q6PBA2,TAIR:AT1G24050.1,TAIR:AT1G70220.1,TrEMBL:B9HJR8,TrEMBL:B9HVC1,TrEMBL:B9SZI5;Derives_from=GSCOCT00032071001;Name=Cc11_g14330;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein LSM12 homolog A,CC_functional_completeness:complete,CC_gene:lsm12a,CC_gene:lsm12b;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032071001~ Putative Protein LSM12 homolog A~ lsm12a~ complete;original_location=join(355805..355947%2C356077..356247%2C356345..356425%2C358068..358191%2C358290..358337);owner=coffea | |
| 71582 chr11 manual_curation exon 30986719 30986940 . - . Parent=GSCOCT00032071001 | |
| 71583 chr11 manual_curation exon 30986419 30986589 . - . Parent=GSCOCT00032071001 | |
| 71584 chr11 manual_curation exon 30986241 30986321 . - . Parent=GSCOCT00032071001 | |
| 71585 chr11 manual_curation exon 30984475 30984598 . - . Parent=GSCOCT00032071001 | |
| 71586 chr11 manual_curation exon 30983247 30984376 . - . Parent=GSCOCT00032071001 | |
| 71587 chr11 manual_curation CDS 30986719 30986861 . - 0 Parent=GSCOCT00032071001 | |
| 71588 chr11 manual_curation CDS 30986419 30986589 . - 2 Parent=GSCOCT00032071001 | |
| 71589 chr11 manual_curation CDS 30986241 30986321 . - 2 Parent=GSCOCT00032071001 | |
| 71590 chr11 manual_curation CDS 30984475 30984598 . - 2 Parent=GSCOCT00032071001 | |
| 71591 chr11 manual_curation CDS 30984329 30984376 . - 0 Parent=GSCOCT00032071001 | |
| 71592 chr11 manual_curation gene 30988528 30990046 . + . ID=GSCOCG00032070001;Name=Cc11_g14340 | |
| 71593 chr11 manual_curation mRNA 30988528 30990046 . + . ID=GSCOCT00032070001;Parent=GSCOCG00032070001;Name=Cc11_g14340 | |
| 71594 chr11 manual_curation polypeptide 30988528 30990046 . + . ID=GSCOCP00032070001;Dbxref=InterPro:IPR004253,PFAM:PF03005,TAIR:AT1G01430.1,TAIR:AT1G70230.1,TAIR:AT4G01080.1,TrEMBL:F6HPK1,TrEMBL:I1J5C7,TrEMBL:I1JC01;Derives_from=GSCOCT00032070001;Name=Cc11_g14340;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:TRICHOME BIREFRINGENCE-LIKE 27,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032070001~ TRICHOME BIREFRINGENCE-LIKE 27~ unknown_gene~ complete;original_location=complement(join(353937..354138%2C352620..353725));owner=coffea | |
| 71595 chr11 manual_curation exon 30988941 30990046 . + . Parent=GSCOCT00032070001 | |
| 71596 chr11 manual_curation exon 30988528 30988729 . + . Parent=GSCOCT00032070001 | |
| 71597 chr11 manual_curation CDS 30988941 30990046 . + 1 Parent=GSCOCT00032070001 | |
| 71598 chr11 manual_curation CDS 30988528 30988729 . + 0 Parent=GSCOCT00032070001 | |
| 71599 chr11 manual_curation gene 30990880 30992525 . + . ID=GSCOCG00032069001;Name=Cc11_g14350 | |
| 71600 chr11 manual_curation mRNA 30990880 30992525 . + . ID=GSCOCT00032069001;Parent=GSCOCG00032069001;Name=Cc11_g14350 | |
| 71601 chr11 manual_curation polypeptide 30991089 30992525 . + . ID=GSCOCP00032069001;Dbxref=GENE3D:G3DSA:3.40.630.30,InterPro:IPR016181,InterPro:IPR022610,PFAM:PF00583,SUPERFAMILY:SSF55729,TAIR:AT1G24040.1,TrEMBL:B9HJR4,TrEMBL:B9SZI3,TrEMBL:D7KNL1;Derives_from=GSCOCT00032069001;Name=Cc11_g14350;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032069001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(350916..351577%2C350141..350405));owner=coffea | |
| 71602 chr11 manual_curation exon 30992261 30992525 . + . Parent=GSCOCT00032069001 | |
| 71603 chr11 manual_curation exon 30990880 30991750 . + . Parent=GSCOCT00032069001 | |
| 71604 chr11 manual_curation CDS 30992261 30992525 . + 2 Parent=GSCOCT00032069001 | |
| 71605 chr11 manual_curation CDS 30991089 30991750 . + 0 Parent=GSCOCT00032069001 | |
| 71606 chr11 manual_curation gene 30993152 30997035 . - . ID=GSCOCG00032067001;Name=Cc11_g14360 | |
| 71607 chr11 manual_curation mRNA 30993152 30997035 . - . ID=GSCOCT00032067001;Parent=GSCOCG00032067001;Name=Cc11_g14360 | |
| 71608 chr11 manual_curation polypeptide 30993712 30996238 . - . ID=GSCOCP00032067001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:P46573,SwissProt:Q9FE20,SwissProt:Q9LV48,TAIR:AT1G20650.1,TAIR:AT1G24030.1,TAIR:AT5G18610.1,TrEMBL:B9SZI2,TrEMBL:D7TNN0,TrEMBL:I1JC04;Derives_from=GSCOCT00032067001;Name=Cc11_g14360;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Serine/threonine-protein kinase PBS1,CC_functional_completeness:fragment,CC_gene:PBS1,CC_gene:APK1B,CC_gene:PERK1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032067001~ Putative Serine/threonine-protein kinase PBS1~ PBS1~ fragment;original_location=join(346428..346497%2C346626..346810%2C347013..347211%2C347290..347453%2C347553..347657%2C348500..348622%2C348718..348954);owner=coffea | |
| 71609 chr11 manual_curation exon 30996169 30997035 . - . Parent=GSCOCT00032067001 | |
| 71610 chr11 manual_curation exon 30995856 30996040 . - . Parent=GSCOCT00032067001 | |
| 71611 chr11 manual_curation exon 30995455 30995653 . - . Parent=GSCOCT00032067001 | |
| 71612 chr11 manual_curation exon 30995213 30995376 . - . Parent=GSCOCT00032067001 | |
| 71613 chr11 manual_curation exon 30995009 30995113 . - . Parent=GSCOCT00032067001 | |
| 71614 chr11 manual_curation exon 30994044 30994166 . - . Parent=GSCOCT00032067001 | |
| 71615 chr11 manual_curation exon 30993152 30993948 . - . Parent=GSCOCT00032067001 | |
| 71616 chr11 manual_curation CDS 30996169 30996238 . - 0 Parent=GSCOCT00032067001 | |
| 71617 chr11 manual_curation CDS 30995856 30996040 . - 1 Parent=GSCOCT00032067001 | |
| 71618 chr11 manual_curation CDS 30995455 30995653 . - 0 Parent=GSCOCT00032067001 | |
| 71619 chr11 manual_curation CDS 30995213 30995376 . - 1 Parent=GSCOCT00032067001 | |
| 71620 chr11 manual_curation CDS 30995009 30995113 . - 0 Parent=GSCOCT00032067001 | |
| 71621 chr11 manual_curation CDS 30994044 30994166 . - 0 Parent=GSCOCT00032067001 | |
| 71622 chr11 manual_curation CDS 30993712 30993948 . - 0 Parent=GSCOCT00032067001 | |
| 71623 chr11 manual_curation gene 30998923 31000251 . + . ID=GSCOCG00032066001;Name=Cc11_g14370 | |
| 71624 chr11 manual_curation mRNA 30998923 31000251 . + . ID=GSCOCT00032066001;Parent=GSCOCG00032066001;Name=Cc11_g14370 | |
| 71625 chr11 manual_curation polypeptide 30999039 30999940 . + . ID=GSCOCP00032066001;Dbxref=InterPro:IPR000916,PFAM:PF00407,PRINTS:PR00634,SwissProt:Q93VR4,SwissProt:Q9SSK7,SwissProt:Q9SSK9,TAIR:AT1G24020.1,TAIR:AT1G70830.1,TAIR:AT1G70850.1,TrEMBL:A5BJD9,TrEMBL:B9HVC5,TrEMBL:D7TNN1;Derives_from=GSCOCT00032066001;Name=Cc11_g14370;Ontology_term=CC_evidence_code:ISS,GO:0006952,GO:0009607,CC_EC_number:missing_EC_number,PRODUCT:MLP-like protein 423,CC_functional_completeness:complete,CC_gene:MLP423,CC_gene:MLP34,CC_gene:MLP28;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032066001~ MLP-like protein 423~ MLP423~ complete;original_location=complement(join(343447..343627%2C342726..342997));owner=coffea | |
| 71626 chr11 manual_curation exon 30999669 31000251 . + . Parent=GSCOCT00032066001 | |
| 71627 chr11 manual_curation exon 30998923 30999219 . + . Parent=GSCOCT00032066001 | |
| 71628 chr11 manual_curation CDS 30999669 30999940 . + 1 Parent=GSCOCT00032066001 | |
| 71629 chr11 manual_curation CDS 30999039 30999219 . + 0 Parent=GSCOCT00032066001 | |
| 71630 chr11 manual_curation gene 31000790 31005429 . - . ID=GSCOCG00032065001;Name=Cc11_g14380 | |
| 71631 chr11 manual_curation mRNA 31000790 31005429 . - . ID=GSCOCT00032065001;Parent=GSCOCG00032065001;Name=Cc11_g14380 | |
| 71632 chr11 manual_curation polypeptide 31000790 31005429 . - . ID=GSCOCP00032065001;Dbxref=InterPro:IPR000620,PFAM:PF00892,SwissProt:Q6J163,TAIR:AT1G60050.1,TAIR:AT1G70260.1,TAIR:AT3G28050.1,TrEMBL:B9HVC6,TrEMBL:D7KXZ8,TrEMBL:F4I5D5;Derives_from=GSCOCT00032065001;Name=Cc11_g14380;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative Auxin-induced protein 5NG4,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032065001~ Putative Auxin-induced protein 5NG4~ unknown_gene~ complete;original_location=join(337237..337436%2C337598..337660%2C338016..338132%2C338735..338990%2C340129..340287%2C340394..340545%2C341717..341876);owner=coffea | |
| 71633 chr11 manual_curation exon 31005230 31005429 . - . Parent=GSCOCT00032065001 | |
| 71634 chr11 manual_curation exon 31005006 31005068 . - . Parent=GSCOCT00032065001 | |
| 71635 chr11 manual_curation exon 31004534 31004650 . - . Parent=GSCOCT00032065001 | |
| 71636 chr11 manual_curation exon 31003676 31003931 . - . Parent=GSCOCT00032065001 | |
| 71637 chr11 manual_curation exon 31002379 31002537 . - . Parent=GSCOCT00032065001 | |
| 71638 chr11 manual_curation exon 31002121 31002272 . - . Parent=GSCOCT00032065001 | |
| 71639 chr11 manual_curation exon 31000790 31000949 . - . Parent=GSCOCT00032065001 | |
| 71640 chr11 manual_curation CDS 31005230 31005429 . - 0 Parent=GSCOCT00032065001 | |
| 71641 chr11 manual_curation CDS 31005006 31005068 . - 2 Parent=GSCOCT00032065001 | |
| 71642 chr11 manual_curation CDS 31004534 31004650 . - 2 Parent=GSCOCT00032065001 | |
| 71643 chr11 manual_curation CDS 31003676 31003931 . - 2 Parent=GSCOCT00032065001 | |
| 71644 chr11 manual_curation CDS 31002379 31002537 . - 0 Parent=GSCOCT00032065001 | |
| 71645 chr11 manual_curation CDS 31002121 31002272 . - 0 Parent=GSCOCT00032065001 | |
| 71646 chr11 manual_curation CDS 31000790 31000949 . - 2 Parent=GSCOCT00032065001 | |
| 71647 chr11 manual_curation gene 31006467 31011394 . - . ID=GSCOCG00032064001;Name=Cc11_g14390 | |
| 71648 chr11 manual_curation mRNA 31006467 31011394 . - . ID=GSCOCT00032064001;Parent=GSCOCG00032064001;Name=Cc11_g14390 | |
| 71649 chr11 manual_curation polypeptide 31007746 31011394 . - . ID=GSCOCP00032064001;Dbxref=InterPro:IPR000620,PFAM:PF00892,SwissProt:Q6J163,TAIR:AT3G28050.1,TAIR:AT5G40230.1,TAIR:AT5G40240.2,TrEMBL:B9HJR3,TrEMBL:B9SZH5,TrEMBL:G7J673;Derives_from=GSCOCT00032064001;Name=Cc11_g14390;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative Auxin-induced protein 5NG4,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032064001~ Putative Auxin-induced protein 5NG4~ unknown_gene~ complete;original_location=join(331272..331453%2C331561..331623%2C331730..331843%2C332539..332773%2C332855..333013%2C333372..333523%2C333671..333770%2C333833..333859%2C334873..334920);owner=coffea | |
| 71650 chr11 manual_curation exon 31011213 31011394 . - . Parent=GSCOCT00032064001 | |
| 71651 chr11 manual_curation exon 31011043 31011105 . - . Parent=GSCOCT00032064001 | |
| 71652 chr11 manual_curation exon 31010823 31010936 . - . Parent=GSCOCT00032064001 | |
| 71653 chr11 manual_curation exon 31009893 31010127 . - . Parent=GSCOCT00032064001 | |
| 71654 chr11 manual_curation exon 31009653 31009811 . - . Parent=GSCOCT00032064001 | |
| 71655 chr11 manual_curation exon 31009143 31009294 . - . Parent=GSCOCT00032064001 | |
| 71656 chr11 manual_curation exon 31008896 31008995 . - . Parent=GSCOCT00032064001 | |
| 71657 chr11 manual_curation exon 31008807 31008833 . - . Parent=GSCOCT00032064001 | |
| 71658 chr11 manual_curation exon 31006467 31007793 . - . Parent=GSCOCT00032064001 | |
| 71659 chr11 manual_curation CDS 31011213 31011394 . - 0 Parent=GSCOCT00032064001 | |
| 71660 chr11 manual_curation CDS 31011043 31011105 . - 2 Parent=GSCOCT00032064001 | |
| 71661 chr11 manual_curation CDS 31010823 31010936 . - 2 Parent=GSCOCT00032064001 | |
| 71662 chr11 manual_curation CDS 31009893 31010127 . - 2 Parent=GSCOCT00032064001 | |
| 71663 chr11 manual_curation CDS 31009653 31009811 . - 0 Parent=GSCOCT00032064001 | |
| 71664 chr11 manual_curation CDS 31009143 31009294 . - 0 Parent=GSCOCT00032064001 | |
| 71665 chr11 manual_curation CDS 31008896 31008995 . - 2 Parent=GSCOCT00032064001 | |
| 71666 chr11 manual_curation CDS 31008807 31008833 . - 0 Parent=GSCOCT00032064001 | |
| 71667 chr11 manual_curation CDS 31007746 31007793 . - 0 Parent=GSCOCT00032064001 | |
| 71668 chr11 manual_curation gene 31018154 31020439 . - . ID=GSCOCG00032063001;Name=Cc11_g14400 | |
| 71669 chr11 manual_curation mRNA 31018154 31020439 . - . ID=GSCOCT00032063001;Parent=GSCOCG00032063001;Name=Cc11_g14400 | |
| 71670 chr11 manual_curation polypeptide 31018154 31020033 . - . ID=GSCOCP00032063001;Dbxref=InterPro:IPR000620,PFAM:PF00892,SwissProt:Q6J163,TAIR:AT3G28050.1,TAIR:AT5G40230.1,TAIR:AT5G40240.2,TrEMBL:B9HJR3,TrEMBL:D7TNN4,TrEMBL:G7J673;Derives_from=GSCOCT00032063001;Name=Cc11_g14400;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative Auxin-induced protein 5NG4,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032063001~ Putative Auxin-induced protein 5NG4~ unknown_gene~ fragment;original_location=join(322633..322712%2C322816..322878%2C322986..323099%2C323187..323418%2C323509..323667%2C323840..323991%2C324362..324512);owner=coffea | |
| 71671 chr11 manual_curation exon 31019954 31020439 . - . Parent=GSCOCT00032063001 | |
| 71672 chr11 manual_curation exon 31019788 31019850 . - . Parent=GSCOCT00032063001 | |
| 71673 chr11 manual_curation exon 31019567 31019680 . - . Parent=GSCOCT00032063001 | |
| 71674 chr11 manual_curation exon 31019248 31019479 . - . Parent=GSCOCT00032063001 | |
| 71675 chr11 manual_curation exon 31018999 31019157 . - . Parent=GSCOCT00032063001 | |
| 71676 chr11 manual_curation exon 31018675 31018826 . - . Parent=GSCOCT00032063001 | |
| 71677 chr11 manual_curation exon 31018154 31018304 . - . Parent=GSCOCT00032063001 | |
| 71678 chr11 manual_curation CDS 31019954 31020033 . - 0 Parent=GSCOCT00032063001 | |
| 71679 chr11 manual_curation CDS 31019788 31019850 . - 2 Parent=GSCOCT00032063001 | |
| 71680 chr11 manual_curation CDS 31019567 31019680 . - 2 Parent=GSCOCT00032063001 | |
| 71681 chr11 manual_curation CDS 31019248 31019479 . - 2 Parent=GSCOCT00032063001 | |
| 71682 chr11 manual_curation CDS 31018999 31019157 . - 0 Parent=GSCOCT00032063001 | |
| 71683 chr11 manual_curation CDS 31018675 31018826 . - 0 Parent=GSCOCT00032063001 | |
| 71684 chr11 manual_curation CDS 31018154 31018304 . - 2 Parent=GSCOCT00032063001 | |
| 71685 chr11 manual_curation gene 31031481 31033668 . + . ID=GSCOCG00032062001;Name=Cc11_g14410 | |
| 71686 chr11 manual_curation mRNA 31031481 31033668 . + . ID=GSCOCT00032062001;Parent=GSCOCG00032062001;Name=Cc11_g14410 | |
| 71687 chr11 manual_curation polypeptide 31031547 31033318 . + . ID=GSCOCP00032062001;Dbxref=SwissProt:P0C7P8,SwissProt:Q58G01,TAIR:AT1G60060.1,TAIR:AT3G15240.2,TAIR:AT5G53900.2,TrEMBL:B9HVC9,TrEMBL:B9S4M6,TrEMBL:F6HPM4;Derives_from=GSCOCT00032062001;Name=Cc11_g14410;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Serine/threonine-protein kinase WNK (With No Lysine)-related,CC_functional_completeness:modules,CC_gene:EMB1444,CC_gene:BHLH155;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032062001~ Serine/threonine-protein kinase WNK (With No Lysine)-related~ EMB1444~ modules;original_location=complement(join(310983..311119%2C310804..310857%2C310502..310675%2C310311..310416%2C310119..310160%2C309966..310022%2C309348..309851));owner=coffea | |
| 71688 chr11 manual_curation exon 31032815 31033668 . + . Parent=GSCOCT00032062001 | |
| 71689 chr11 manual_curation exon 31032644 31032700 . + . Parent=GSCOCT00032062001 | |
| 71690 chr11 manual_curation exon 31032506 31032547 . + . Parent=GSCOCT00032062001 | |
| 71691 chr11 manual_curation exon 31032250 31032355 . + . Parent=GSCOCT00032062001 | |
| 71692 chr11 manual_curation exon 31031991 31032164 . + . Parent=GSCOCT00032062001 | |
| 71693 chr11 manual_curation exon 31031809 31031862 . + . Parent=GSCOCT00032062001 | |
| 71694 chr11 manual_curation exon 31031481 31031683 . + . Parent=GSCOCT00032062001 | |
| 71695 chr11 manual_curation CDS 31032815 31033318 . + 0 Parent=GSCOCT00032062001 | |
| 71696 chr11 manual_curation CDS 31032644 31032700 . + 0 Parent=GSCOCT00032062001 | |
| 71697 chr11 manual_curation CDS 31032506 31032547 . + 0 Parent=GSCOCT00032062001 | |
| 71698 chr11 manual_curation CDS 31032250 31032355 . + 2 Parent=GSCOCT00032062001 | |
| 71699 chr11 manual_curation CDS 31031991 31032164 . + 2 Parent=GSCOCT00032062001 | |
| 71700 chr11 manual_curation CDS 31031809 31031862 . + 2 Parent=GSCOCT00032062001 | |
| 71701 chr11 manual_curation CDS 31031547 31031683 . + 0 Parent=GSCOCT00032062001 | |
| 71702 chr11 manual_curation gene 31034430 31045008 . - . ID=GSCOCG00032061001;Name=Cc11_g14420 | |
| 71703 chr11 manual_curation mRNA 31034430 31045008 . - . ID=GSCOCT00032061001;Parent=GSCOCG00032061001;Name=Cc11_g14420 | |
| 71704 chr11 manual_curation polypeptide 31034965 31045008 . - . ID=GSCOCP00032061001;Dbxref=GENE3D:G3DSA:3.10.20.30,GENE3D:G3DSA:3.40.50.800,InterPro:IPR002314,InterPro:IPR002320,InterPro:IPR004095,InterPro:IPR004154,InterPro:IPR006195,InterPro:IPR012675,InterPro:IPR012676,InterPro:IPR012947,InterPro:IPR018158,InterPro:IPR018163,PFAM:PF00587,PFAM:PF02824,PFAM:PF03129,PFAM:PF07973,PRINTS:PR01047,PROFILE:PS50862,SMART:SM00863,SUPERFAMILY:SSF52954,SUPERFAMILY:SSF55186,SUPERFAMILY:SSF81271,SwissProt:O04630,SwissProt:Q54J66,SwissProt:Q9D0R2,TAIR:AT1G17960.1,TAIR:AT2G04842.1,TAIR:AT5G26830.1,TIGRFAMs:TIGR00418,TrEMBL:D7TNP6,TrEMBL:D7UAH0,TrEMBL:G7K2Q8;Derives_from=GSCOCT00032061001;Name=Cc11_g14420;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0004812,GO:0004829,GO:0005524,GO:0005737,GO:0006412,GO:0006418,GO:0006435,GO:0043039,CC_EC_number:6.1.1.3,PRODUCT:Threonine--tRNA ligase%2C mitochondrial,CC_functional_completeness:complete,CC_gene:THRRS,CC_gene:thrS1,CC_gene:Tars;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032061001~ Threonine--tRNA ligase%2C mitochondrial~ THRRS~ complete;original_location=join(297658..297938%2C298033..298270%2C298390..298449%2C298879..298968%2C300100..300174%2C300252..300380%2C300665..300754%2C301904..301992%2C302086..302182%2C302265..302351%2C302900..302984%2C303090..303184%2C303534..303566%2C303638..303724%2C304492..304584%2C305532..305624%2C305831..306052%2C306282..306353%2C306534..306605%2C307606..307701);owner=coffea | |
| 71705 chr11 manual_curation exon 31044728 31045008 . - . Parent=GSCOCT00032061001 | |
| 71706 chr11 manual_curation exon 31044396 31044633 . - . Parent=GSCOCT00032061001 | |
| 71707 chr11 manual_curation exon 31044217 31044276 . - . Parent=GSCOCT00032061001 | |
| 71708 chr11 manual_curation exon 31043698 31043787 . - . Parent=GSCOCT00032061001 | |
| 71709 chr11 manual_curation exon 31042492 31042566 . - . Parent=GSCOCT00032061001 | |
| 71710 chr11 manual_curation exon 31042286 31042414 . - . Parent=GSCOCT00032061001 | |
| 71711 chr11 manual_curation exon 31041912 31042001 . - . Parent=GSCOCT00032061001 | |
| 71712 chr11 manual_curation exon 31040674 31040762 . - . Parent=GSCOCT00032061001 | |
| 71713 chr11 manual_curation exon 31040484 31040580 . - . Parent=GSCOCT00032061001 | |
| 71714 chr11 manual_curation exon 31040315 31040401 . - . Parent=GSCOCT00032061001 | |
| 71715 chr11 manual_curation exon 31039682 31039766 . - . Parent=GSCOCT00032061001 | |
| 71716 chr11 manual_curation exon 31039482 31039576 . - . Parent=GSCOCT00032061001 | |
| 71717 chr11 manual_curation exon 31039100 31039132 . - . Parent=GSCOCT00032061001 | |
| 71718 chr11 manual_curation exon 31038942 31039028 . - . Parent=GSCOCT00032061001 | |
| 71719 chr11 manual_curation exon 31038082 31038174 . - . Parent=GSCOCT00032061001 | |
| 71720 chr11 manual_curation exon 31037042 31037134 . - . Parent=GSCOCT00032061001 | |
| 71721 chr11 manual_curation exon 31036614 31036835 . - . Parent=GSCOCT00032061001 | |
| 71722 chr11 manual_curation exon 31036313 31036384 . - . Parent=GSCOCT00032061001 | |
| 71723 chr11 manual_curation exon 31036061 31036132 . - . Parent=GSCOCT00032061001 | |
| 71724 chr11 manual_curation exon 31034430 31035060 . - . Parent=GSCOCT00032061001 | |
| 71725 chr11 manual_curation CDS 31044728 31045008 . - 0 Parent=GSCOCT00032061001 | |
| 71726 chr11 manual_curation CDS 31044396 31044633 . - 2 Parent=GSCOCT00032061001 | |
| 71727 chr11 manual_curation CDS 31044217 31044276 . - 0 Parent=GSCOCT00032061001 | |
| 71728 chr11 manual_curation CDS 31043698 31043787 . - 0 Parent=GSCOCT00032061001 | |
| 71729 chr11 manual_curation CDS 31042492 31042566 . - 0 Parent=GSCOCT00032061001 | |
| 71730 chr11 manual_curation CDS 31042286 31042414 . - 0 Parent=GSCOCT00032061001 | |
| 71731 chr11 manual_curation CDS 31041912 31042001 . - 0 Parent=GSCOCT00032061001 | |
| 71732 chr11 manual_curation CDS 31040674 31040762 . - 0 Parent=GSCOCT00032061001 | |
| 71733 chr11 manual_curation CDS 31040484 31040580 . - 2 Parent=GSCOCT00032061001 | |
| 71734 chr11 manual_curation CDS 31040315 31040401 . - 0 Parent=GSCOCT00032061001 | |
| 71735 chr11 manual_curation CDS 31039682 31039766 . - 0 Parent=GSCOCT00032061001 | |
| 71736 chr11 manual_curation CDS 31039482 31039576 . - 1 Parent=GSCOCT00032061001 | |
| 71737 chr11 manual_curation CDS 31039100 31039132 . - 0 Parent=GSCOCT00032061001 | |
| 71738 chr11 manual_curation CDS 31038942 31039028 . - 0 Parent=GSCOCT00032061001 | |
| 71739 chr11 manual_curation CDS 31038082 31038174 . - 0 Parent=GSCOCT00032061001 | |
| 71740 chr11 manual_curation CDS 31037042 31037134 . - 0 Parent=GSCOCT00032061001 | |
| 71741 chr11 manual_curation CDS 31036614 31036835 . - 0 Parent=GSCOCT00032061001 | |
| 71742 chr11 manual_curation CDS 31036313 31036384 . - 0 Parent=GSCOCT00032061001 | |
| 71743 chr11 manual_curation CDS 31036061 31036132 . - 0 Parent=GSCOCT00032061001 | |
| 71744 chr11 manual_curation CDS 31034965 31035060 . - 0 Parent=GSCOCT00032061001 | |
| 71745 chr11 manual_curation gene 31050257 31051615 . + . ID=GSCOCG00032060001;Name=Cc11_g14430 | |
| 71746 chr11 manual_curation mRNA 31050257 31051615 . + . ID=GSCOCT00032060001;Parent=GSCOCG00032060001;Name=Cc11_g14430 | |
| 71747 chr11 manual_curation polypeptide 31050257 31051615 . + . ID=GSCOCP00032060001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,PROSITE:PS00375,SwissProt:Q5NTH0,SwissProt:Q66PF2,SwissProt:Q8GVE3,TAIR:AT1G64910.1,TAIR:AT5G49690.1,TAIR:AT5G65550.1,TrEMBL:F6HIX7,TrEMBL:F6I0D3,TrEMBL:F6I5W2;Derives_from=GSCOCT00032060001;Name=Cc11_g14430;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:Putative Cyanidin-3-O-glucoside 2-O-glucuronosyltransferase,CC_functional_completeness:complete,CC_gene:UGAT,CC_gene:C12RT1,CC_gene:GT4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032060001~ Putative Cyanidin-3-O-glucoside 2-O-glucuronosyltransferase~ UGAT~ complete;original_location=complement(291051..292409);owner=coffea | |
| 71748 chr11 manual_curation exon 31050257 31051615 . + . Parent=GSCOCT00032060001 | |
| 71749 chr11 manual_curation CDS 31050257 31051615 . + 0 Parent=GSCOCT00032060001 | |
| 71750 chr11 manual_curation gene 31053202 31054384 . + . ID=GSCOCG00032058001;Name=Cc11_g14440 | |
| 71751 chr11 manual_curation mRNA 31053202 31054384 . + . ID=GSCOCT00032058001;Parent=GSCOCG00032058001;Name=Cc11_g14440 | |
| 71752 chr11 manual_curation polypeptide 31053347 31054384 . + . ID=GSCOCP00032058001;Dbxref=SwissProt:Q8GW38,SwissProt:Q9FL07,TAIR:AT1G23980.1,TAIR:AT5G40250.1,TrEMBL:A5ATC1,TrEMBL:B9RUC1,TrEMBL:B9S4M2;Derives_from=GSCOCT00032058001;Name=Cc11_g14440;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative RING-H2 finger protein ATL46,CC_functional_completeness:fragment,CC_gene:ATL46,CC_gene:ATL47;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032058001~ Putative RING-H2 finger protein ATL46~ ATL46~ fragment;original_location=complement(join(289298..289319%2C288982..289096%2C288282..288891));owner=coffea | |
| 71753 chr11 manual_curation exon 31053775 31054384 . + . Parent=GSCOCT00032058001 | |
| 71754 chr11 manual_curation exon 31053570 31053684 . + . Parent=GSCOCT00032058001 | |
| 71755 chr11 manual_curation exon 31053202 31053368 . + . Parent=GSCOCT00032058001 | |
| 71756 chr11 manual_curation CDS 31053775 31054384 . + 2 Parent=GSCOCT00032058001 | |
| 71757 chr11 manual_curation CDS 31053570 31053684 . + 1 Parent=GSCOCT00032058001 | |
| 71758 chr11 manual_curation CDS 31053347 31053368 . + 0 Parent=GSCOCT00032058001 | |
| 71759 chr11 manual_curation gene 31056872 31070423 . - . ID=GSCOCG00032057001;Name=Cc11_g14450 | |
| 71760 chr11 manual_curation mRNA 31056872 31070423 . - . ID=GSCOCT00032057001;Parent=GSCOCG00032057001;Name=Cc11_g14450 | |
| 71761 chr11 manual_curation polypeptide 31057469 31070025 . - . ID=GSCOCP00032057001;Dbxref=GENE3D:G3DSA:1.25.10.10,GENE3D:G3DSA:2.60.40.1230,InterPro:IPR002553,InterPro:IPR008152,InterPro:IPR008153,InterPro:IPR011989,InterPro:IPR013041,InterPro:IPR016024,InterPro:IPR017107,PFAM:PF01602,PFAM:PF02883,PIR:PIRSF037094,PROFILE:PS50180,SMART:SM00809,SUPERFAMILY:SSF48371,SUPERFAMILY:SSF49348,SwissProt:P22892,SwissProt:Q84K16,SwissProt:Q9ZUI6,TAIR:AT1G23900.1,TAIR:AT1G23940.1,TAIR:AT1G60070.2,TrEMBL:B9HC63,TrEMBL:B9S4M0,TrEMBL:D7TNP9;Derives_from=GSCOCT00032057001;Name=Cc11_g14450;Ontology_term=CC_evidence_code:ISS,GO:0005488,GO:0005515,GO:0005794,GO:0006886,GO:0008565,GO:0015031,GO:0016192,GO:0030117,GO:0030131,GO:0044431,CC_EC_number:missing_EC_number,PRODUCT:AP-1 complex subunit gamma-2,CC_functional_completeness:complete,CC_gene:At1g60070,CC_gene:GAMMA-ADR,CC_gene:Ap1g1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032057001~ AP-1 complex subunit gamma-2~ At1g60070~ complete;original_location=join(272641..272672%2C274974..275276%2C275555..275696%2C276276..276449%2C277491..277670%2C278734..278888%2C279277..279367%2C279943..280106%2C280683..280737%2C281456..281578%2C281701..281796%2C282461..282588%2C282706..282810%2C282941..283200%2C283292..283540%2C283632..283807%2C284523..284627%2C285102..285197);owner=coffea | |
| 71762 chr11 manual_curation exon 31069994 31070423 . - . Parent=GSCOCT00032057001 | |
| 71763 chr11 manual_curation exon 31067390 31067692 . - . Parent=GSCOCT00032057001 | |
| 71764 chr11 manual_curation exon 31066970 31067111 . - . Parent=GSCOCT00032057001 | |
| 71765 chr11 manual_curation exon 31066217 31066390 . - . Parent=GSCOCT00032057001 | |
| 71766 chr11 manual_curation exon 31064996 31065175 . - . Parent=GSCOCT00032057001 | |
| 71767 chr11 manual_curation exon 31063778 31063932 . - . Parent=GSCOCT00032057001 | |
| 71768 chr11 manual_curation exon 31063299 31063389 . - . Parent=GSCOCT00032057001 | |
| 71769 chr11 manual_curation exon 31062560 31062723 . - . Parent=GSCOCT00032057001 | |
| 71770 chr11 manual_curation exon 31061929 31061983 . - . Parent=GSCOCT00032057001 | |
| 71771 chr11 manual_curation exon 31061088 31061210 . - . Parent=GSCOCT00032057001 | |
| 71772 chr11 manual_curation exon 31060870 31060965 . - . Parent=GSCOCT00032057001 | |
| 71773 chr11 manual_curation exon 31060078 31060205 . - . Parent=GSCOCT00032057001 | |
| 71774 chr11 manual_curation exon 31059856 31059960 . - . Parent=GSCOCT00032057001 | |
| 71775 chr11 manual_curation exon 31059466 31059725 . - . Parent=GSCOCT00032057001 | |
| 71776 chr11 manual_curation exon 31059126 31059374 . - . Parent=GSCOCT00032057001 | |
| 71777 chr11 manual_curation exon 31058859 31059034 . - . Parent=GSCOCT00032057001 | |
| 71778 chr11 manual_curation exon 31058039 31058143 . - . Parent=GSCOCT00032057001 | |
| 71779 chr11 manual_curation exon 31056872 31057564 . - . Parent=GSCOCT00032057001 | |
| 71780 chr11 manual_curation CDS 31069994 31070025 . - 0 Parent=GSCOCT00032057001 | |
| 71781 chr11 manual_curation CDS 31067390 31067692 . - 2 Parent=GSCOCT00032057001 | |
| 71782 chr11 manual_curation CDS 31066970 31067111 . - 2 Parent=GSCOCT00032057001 | |
| 71783 chr11 manual_curation CDS 31066217 31066390 . - 0 Parent=GSCOCT00032057001 | |
| 71784 chr11 manual_curation CDS 31064996 31065175 . - 0 Parent=GSCOCT00032057001 | |
| 71785 chr11 manual_curation CDS 31063778 31063932 . - 0 Parent=GSCOCT00032057001 | |
| 71786 chr11 manual_curation CDS 31063299 31063389 . - 2 Parent=GSCOCT00032057001 | |
| 71787 chr11 manual_curation CDS 31062560 31062723 . - 0 Parent=GSCOCT00032057001 | |
| 71788 chr11 manual_curation CDS 31061929 31061983 . - 2 Parent=GSCOCT00032057001 | |
| 71789 chr11 manual_curation CDS 31061088 31061210 . - 0 Parent=GSCOCT00032057001 | |
| 71790 chr11 manual_curation CDS 31060870 31060965 . - 0 Parent=GSCOCT00032057001 | |
| 71791 chr11 manual_curation CDS 31060078 31060205 . - 0 Parent=GSCOCT00032057001 | |
| 71792 chr11 manual_curation CDS 31059856 31059960 . - 2 Parent=GSCOCT00032057001 | |
| 71793 chr11 manual_curation CDS 31059466 31059725 . - 2 Parent=GSCOCT00032057001 | |
| 71794 chr11 manual_curation CDS 31059126 31059374 . - 1 Parent=GSCOCT00032057001 | |
| 71795 chr11 manual_curation CDS 31058859 31059034 . - 1 Parent=GSCOCT00032057001 | |
| 71796 chr11 manual_curation CDS 31058039 31058143 . - 0 Parent=GSCOCT00032057001 | |
| 71797 chr11 manual_curation CDS 31057469 31057564 . - 0 Parent=GSCOCT00032057001 | |
| 71798 chr11 manual_curation gene 31074733 31078569 . - . ID=GSCOCG00032056001;Name=Cc11_g14460 | |
| 71799 chr11 manual_curation mRNA 31074733 31078569 . - . ID=GSCOCT00032056001;Parent=GSCOCG00032056001;Name=Cc11_g14460 | |
| 71800 chr11 manual_curation polypeptide 31075054 31078145 . - . ID=GSCOCP00032056001;Dbxref=GENE3D:G3DSA:2.120.10.30,InterPro:IPR001258,InterPro:IPR011042,PFAM:PF01436,TAIR:AT1G23880.1,TAIR:AT1G70280.2,TAIR:AT5G14890.1,TrEMBL:B9S4L8,TrEMBL:I1J5A9,TrEMBL:I1N1F2;Derives_from=GSCOCT00032056001;Name=Cc11_g14460;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:NHL domain-containing protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032056001~ NHL domain-containing protein~ unknown_gene~ complete;original_location=join(264521..264617%2C264908..264988%2C265127..265303%2C265774..265944%2C266203..266415%2C266495..266583%2C266938..267612);owner=coffea | |
| 71801 chr11 manual_curation exon 31078049 31078569 . - . Parent=GSCOCT00032056001 | |
| 71802 chr11 manual_curation exon 31077678 31077758 . - . Parent=GSCOCT00032056001 | |
| 71803 chr11 manual_curation exon 31077363 31077539 . - . Parent=GSCOCT00032056001 | |
| 71804 chr11 manual_curation exon 31076722 31076892 . - . Parent=GSCOCT00032056001 | |
| 71805 chr11 manual_curation exon 31076251 31076463 . - . Parent=GSCOCT00032056001 | |
| 71806 chr11 manual_curation exon 31076083 31076171 . - . Parent=GSCOCT00032056001 | |
| 71807 chr11 manual_curation exon 31074733 31075728 . - . Parent=GSCOCT00032056001 | |
| 71808 chr11 manual_curation CDS 31078049 31078145 . - 0 Parent=GSCOCT00032056001 | |
| 71809 chr11 manual_curation CDS 31077678 31077758 . - 1 Parent=GSCOCT00032056001 | |
| 71810 chr11 manual_curation CDS 31077363 31077539 . - 1 Parent=GSCOCT00032056001 | |
| 71811 chr11 manual_curation CDS 31076722 31076892 . - 1 Parent=GSCOCT00032056001 | |
| 71812 chr11 manual_curation CDS 31076251 31076463 . - 1 Parent=GSCOCT00032056001 | |
| 71813 chr11 manual_curation CDS 31076083 31076171 . - 1 Parent=GSCOCT00032056001 | |
| 71814 chr11 manual_curation CDS 31075054 31075728 . - 0 Parent=GSCOCT00032056001 | |
| 71815 chr11 manual_curation gene 31086530 31092599 . - . ID=GSCOCG00032055001;Name=Cc11_g14470 | |
| 71816 chr11 manual_curation mRNA 31086530 31092599 . - . ID=GSCOCT00032055001;Parent=GSCOCG00032055001;Name=Cc11_g14470 | |
| 71817 chr11 manual_curation polypeptide 31086781 31089700 . - . ID=GSCOCP00032055001;Dbxref=InterPro:IPR001830,InterPro:IPR003337,InterPro:IPR006379,PFAM:PF00982,PFAM:PF02358,SwissProt:O80738,SwissProt:Q0WUI9,SwissProt:Q9LRA7,TAIR:AT1G23870.1,TAIR:AT1G60140.1,TAIR:AT1G70290.1,TIGRFAMs:TIGR00685,TIGRFAMs:TIGR01484,TrEMBL:A5B8V9,TrEMBL:F6HPM7,TrEMBL:G8XR07;Derives_from=GSCOCT00032055001;Name=Cc11_g14470;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005992,GO:0008152,CC_EC_number:2.4.1.15,PRODUCT:Probable alpha%2Calpha-trehalose-phosphate synthase [UDP-forming] 10,CC_functional_completeness:complete,CC_gene:TPS10,CC_gene:TPS9,CC_gene:TPS8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032055001~ Probable alpha%2Calpha-trehalose-phosphate synthase [UDP-forming] 10~ TPS10~ complete;original_location=join(252966..254950%2C255033..255300%2C255562..255885);owner=coffea | |
| 71818 chr11 manual_curation exon 31092391 31092599 . - . Parent=GSCOCT00032055001 | |
| 71819 chr11 manual_curation exon 31087716 31089805 . - . Parent=GSCOCT00032055001 | |
| 71820 chr11 manual_curation exon 31087366 31087633 . - . Parent=GSCOCT00032055001 | |
| 71821 chr11 manual_curation exon 31086530 31087104 . - . Parent=GSCOCT00032055001 | |
| 71822 chr11 manual_curation CDS 31087716 31089700 . - 0 Parent=GSCOCT00032055001 | |
| 71823 chr11 manual_curation CDS 31087366 31087633 . - 2 Parent=GSCOCT00032055001 | |
| 71824 chr11 manual_curation CDS 31086781 31087104 . - 0 Parent=GSCOCT00032055001 | |
| 71825 chr11 manual_curation gene 31107623 31110604 . - . ID=GSCOCG00032053001;Name=Cc11_g14480 | |
| 71826 chr11 manual_curation mRNA 31107623 31110604 . - . ID=GSCOCT00032053001;Parent=GSCOCG00032053001;Name=Cc11_g14480 | |
| 71827 chr11 manual_curation polypeptide 31107932 31110604 . - . ID=GSCOCP00032053001;Dbxref=InterPro:IPR003855,PFAM:PF02705,SwissProt:Q6YWQ4,SwissProt:Q8W4I4,SwissProt:Q9M7J9,TAIR:AT1G70300.1,TAIR:AT2G40540.1,TAIR:AT5G14880.1,TrEMBL:B9HJS8,TrEMBL:B9HVB0,TrEMBL:B9T846;Derives_from=GSCOCT00032053001;Name=Cc11_g14480;Ontology_term=CC_evidence_code:ISS,GO:0006813,GO:0015079,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Potassium transporter 6,CC_functional_completeness:fragment,CC_gene:POT6,CC_gene:HAK25,CC_gene:POT8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032053001~ Potassium transporter 6~ POT6~ fragment;original_location=join(232062..232103%2C232755..232878%2C232971..233225%2C233674..234734);owner=coffea | |
| 71828 chr11 manual_curation exon 31110563 31110604 . - . Parent=GSCOCT00032053001 | |
| 71829 chr11 manual_curation exon 31109788 31109911 . - . Parent=GSCOCT00032053001 | |
| 71830 chr11 manual_curation exon 31109441 31109695 . - . Parent=GSCOCT00032053001 | |
| 71831 chr11 manual_curation exon 31107623 31108992 . - . Parent=GSCOCT00032053001 | |
| 71832 chr11 manual_curation CDS 31110563 31110604 . - 0 Parent=GSCOCT00032053001 | |
| 71833 chr11 manual_curation CDS 31109788 31109911 . - 0 Parent=GSCOCT00032053001 | |
| 71834 chr11 manual_curation CDS 31109441 31109695 . - 1 Parent=GSCOCT00032053001 | |
| 71835 chr11 manual_curation CDS 31107932 31108992 . - 1 Parent=GSCOCT00032053001 | |
| 71836 chr11 manual_curation gene 31110711 31113499 . - . ID=GSCOCG00032052001;Name=Cc11_g14490 | |
| 71837 chr11 manual_curation mRNA 31110711 31113499 . - . ID=GSCOCT00032052001;Parent=GSCOCG00032052001;Name=Cc11_g14490 | |
| 71838 chr11 manual_curation polypeptide 31110711 31113059 . - . ID=GSCOCP00032052001;Dbxref=InterPro:IPR003855,PFAM:PF02705,SwissProt:Q7XIV8,SwissProt:Q8W4I4,SwissProt:Q9M7J9,TAIR:AT1G70300.1,TAIR:AT2G40540.1,TAIR:AT5G14880.1,TrEMBL:A5AQ32,TrEMBL:B9T846,TrEMBL:F6HPM8;Derives_from=GSCOCT00032052001;Name=Cc11_g14490;Ontology_term=CC_evidence_code:ISS,GO:0006813,GO:0015079,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Potassium transporter 6,CC_functional_completeness:fragment,CC_gene:POT6,CC_gene:POT8,CC_gene:HAK9;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032052001~ Potassium transporter 6~ POT6~ fragment;original_location=join(229607..229645%2C229747..230233%2C230332..230385%2C231678..231955);owner=coffea | |
| 71839 chr11 manual_curation exon 31113021 31113499 . - . Parent=GSCOCT00032052001 | |
| 71840 chr11 manual_curation exon 31112433 31112919 . - . Parent=GSCOCT00032052001 | |
| 71841 chr11 manual_curation exon 31112281 31112334 . - . Parent=GSCOCT00032052001 | |
| 71842 chr11 manual_curation exon 31110711 31110988 . - . Parent=GSCOCT00032052001 | |
| 71843 chr11 manual_curation CDS 31113021 31113059 . - 0 Parent=GSCOCT00032052001 | |
| 71844 chr11 manual_curation CDS 31112433 31112919 . - 0 Parent=GSCOCT00032052001 | |
| 71845 chr11 manual_curation CDS 31112281 31112334 . - 1 Parent=GSCOCT00032052001 | |
| 71846 chr11 manual_curation CDS 31110711 31110988 . - 1 Parent=GSCOCT00032052001 | |
| 71847 chr11 manual_curation gene 31123873 31132150 . - . ID=GSCOCG00032051001;Name=Cc11_g14500 | |
| 71848 chr11 manual_curation mRNA 31123873 31132150 . - . ID=GSCOCT00032051001;Parent=GSCOCG00032051001;Name=Cc11_g14500 | |
| 71849 chr11 manual_curation polypeptide 31124326 31131541 . - . ID=GSCOCP00032051001;Dbxref=InterPro:IPR003855,InterPro:IPR018519,PFAM:PF02705,SwissProt:O80739,SwissProt:Q6H4R6,SwissProt:Q8LPL8,TAIR:AT1G60160.1,TAIR:AT4G33530.1,TAIR:AT5G09400.1,TIGRFAMs:TIGR00794,TrEMBL:B9HVB1,TrEMBL:B9T7V7,TrEMBL:F6HPM9;Derives_from=GSCOCT00032051001;Name=Cc11_g14500;Ontology_term=CC_evidence_code:ISS,GO:0006813,GO:0015079,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative potassium transporter 12,CC_functional_completeness:complete,CC_gene:POT12,CC_gene:HAK23,CC_gene:POT13;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032051001~ Putative potassium transporter 12~ POT12~ complete;original_location=join(211125..211160%2C212820..213048%2C213143..213391%2C214104..214154%2C214511..214771%2C216018..216070%2C216177..216291%2C216419..216673%2C217289..217993%2C218102..218340);owner=coffea | |
| 71850 chr11 manual_curation exon 31131506 31132150 . - . Parent=GSCOCT00032051001 | |
| 71851 chr11 manual_curation exon 31129618 31129846 . - . Parent=GSCOCT00032051001 | |
| 71852 chr11 manual_curation exon 31129275 31129523 . - . Parent=GSCOCT00032051001 | |
| 71853 chr11 manual_curation exon 31128512 31128562 . - . Parent=GSCOCT00032051001 | |
| 71854 chr11 manual_curation exon 31127895 31128155 . - . Parent=GSCOCT00032051001 | |
| 71855 chr11 manual_curation exon 31126596 31126648 . - . Parent=GSCOCT00032051001 | |
| 71856 chr11 manual_curation exon 31126375 31126489 . - . Parent=GSCOCT00032051001 | |
| 71857 chr11 manual_curation exon 31125993 31126247 . - . Parent=GSCOCT00032051001 | |
| 71858 chr11 manual_curation exon 31124673 31125377 . - . Parent=GSCOCT00032051001 | |
| 71859 chr11 manual_curation exon 31123873 31124564 . - . Parent=GSCOCT00032051001 | |
| 71860 chr11 manual_curation CDS 31131506 31131541 . - 0 Parent=GSCOCT00032051001 | |
| 71861 chr11 manual_curation CDS 31129618 31129846 . - 0 Parent=GSCOCT00032051001 | |
| 71862 chr11 manual_curation CDS 31129275 31129523 . - 1 Parent=GSCOCT00032051001 | |
| 71863 chr11 manual_curation CDS 31128512 31128562 . - 1 Parent=GSCOCT00032051001 | |
| 71864 chr11 manual_curation CDS 31127895 31128155 . - 1 Parent=GSCOCT00032051001 | |
| 71865 chr11 manual_curation CDS 31126596 31126648 . - 1 Parent=GSCOCT00032051001 | |
| 71866 chr11 manual_curation CDS 31126375 31126489 . - 0 Parent=GSCOCT00032051001 | |
| 71867 chr11 manual_curation CDS 31125993 31126247 . - 1 Parent=GSCOCT00032051001 | |
| 71868 chr11 manual_curation CDS 31124673 31125377 . - 1 Parent=GSCOCT00032051001 | |
| 71869 chr11 manual_curation CDS 31124326 31124564 . - 1 Parent=GSCOCT00032051001 | |
| 71870 chr11 manual_curation gene 31134503 31135018 . - . ID=GSCOCG00032049001;Name=Cc11_g14510 | |
| 71871 chr11 manual_curation mRNA 31134503 31135018 . - . ID=GSCOCT00032049001;Parent=GSCOCG00032049001;Name=Cc11_g14510 | |
| 71872 chr11 manual_curation polypeptide 31134503 31135018 . - . ID=GSCOCP00032049001;Dbxref=GENE3D:G3DSA:1.25.40.20,InterPro:IPR002110,InterPro:IPR020683,PFAM:PF00023,PROFILE:PS50088,PROFILE:PS50297,SMART:SM00248,SUPERFAMILY:SSF48403,TAIR:AT1G03670.1,TAIR:AT4G03490.2,TAIR:AT4G03500.1,TrEMBL:F6HN53,TrEMBL:F6HYQ2,TrEMBL:F6HYQ3;Derives_from=GSCOCT00032049001;Name=Cc11_g14510;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative ankyrin repeat family protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032049001~ Putative ankyrin repeat family protein~ unknown_gene~ fragment;original_location=207648..208163;owner=coffea | |
| 71873 chr11 manual_curation exon 31134503 31135018 . - . Parent=GSCOCT00032049001 | |
| 71874 chr11 manual_curation CDS 31134503 31135018 . - 0 Parent=GSCOCT00032049001 | |
| 71875 chr11 manual_curation gene 31146512 31150850 . + . ID=GSCOCG00032048001;Name=Cc11_g14520 | |
| 71876 chr11 manual_curation mRNA 31146512 31150850 . + . ID=GSCOCT00032048001;Parent=GSCOCG00032048001;Name=Cc11_g14520 | |
| 71877 chr11 manual_curation polypeptide 31146777 31149463 . + . ID=GSCOCP00032048001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR001878,InterPro:IPR012677,PFAM:PF00076,PFAM:PF00098,PROFILE:PS50102,PROFILE:PS50158,SMART:SM00343,SMART:SM00360,SwissProt:Q69KL9,SwissProt:Q6K4N0,SwissProt:Q6K9C3,TAIR:AT1G23860.1,TAIR:AT2G24590.1,TAIR:AT4G31580.1,TrEMBL:B8AE25,TrEMBL:F6HPN0,TrEMBL:I1P511;Derives_from=GSCOCT00032048001;Name=Cc11_g14520;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Serine/arginine-rich splicing factor RSZ21,CC_functional_completeness:complete,CC_gene:RSZP21,CC_gene:RSZ21A,CC_gene:RSZ23;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032048001~ Serine/arginine-rich splicing factor RSZ21~ RSZP21~ complete;original_location=complement(join(195801..195889%2C195062..195150%2C194159..194381%2C193569..193688%2C193390..193473%2C193203..193209));owner=coffea | |
| 71878 chr11 manual_curation exon 31146512 31146637 . + . Parent=GSCOCT00032048001 | |
| 71879 chr11 manual_curation exon 31149457 31150850 . + . Parent=GSCOCT00032048001 | |
| 71880 chr11 manual_curation exon 31149193 31149276 . + . Parent=GSCOCT00032048001 | |
| 71881 chr11 manual_curation exon 31148978 31149097 . + . Parent=GSCOCT00032048001 | |
| 71882 chr11 manual_curation exon 31148285 31148507 . + . Parent=GSCOCT00032048001 | |
| 71883 chr11 manual_curation exon 31147516 31147604 . + . Parent=GSCOCT00032048001 | |
| 71884 chr11 manual_curation exon 31146772 31146865 . + . Parent=GSCOCT00032048001 | |
| 71885 chr11 manual_curation CDS 31149457 31149463 . + 2 Parent=GSCOCT00032048001 | |
| 71886 chr11 manual_curation CDS 31149193 31149276 . + 2 Parent=GSCOCT00032048001 | |
| 71887 chr11 manual_curation CDS 31148978 31149097 . + 2 Parent=GSCOCT00032048001 | |
| 71888 chr11 manual_curation CDS 31148285 31148507 . + 1 Parent=GSCOCT00032048001 | |
| 71889 chr11 manual_curation CDS 31147516 31147604 . + 2 Parent=GSCOCT00032048001 | |
| 71890 chr11 manual_curation CDS 31146777 31146865 . + 0 Parent=GSCOCT00032048001 | |
| 71891 chr11 manual_curation gene 31152526 31155948 . - . ID=GSCOCG00032046001;Name=Cc11_g14530 | |
| 71892 chr11 manual_curation mRNA 31152526 31155948 . - . ID=GSCOCT00032046001;Parent=GSCOCG00032046001;Name=Cc11_g14530 | |
| 71893 chr11 manual_curation polypeptide 31152526 31155704 . - . ID=GSCOCP00032046001;Dbxref=InterPro:IPR001045,PANTHER:PTHR11558,PFAM:PF01564,PROFILE:PS51006,PROSITE:PS01330,SwissProt:O48659,SwissProt:O48660,SwissProt:Q9ZS45,SwissProt:Q9ZTR1,TAIR:AT1G23820.1,TAIR:AT1G70310.1,TAIR:AT5G53120.6,TIGRFAMs:TIGR00417,TrEMBL:C6T918,TrEMBL:C6THA0;Derives_from=GSCOCT00032046001;Name=Cc11_g14530;Ontology_term=CC_evidence_code:ISS,GO:0003824,CC_EC_number:2.5.1.16,PRODUCT:Spermidine synthase 1,CC_functional_completeness:fragment,CC_gene:SPDSYN1,CC_gene:SPDSYN;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032046001~ Spermidine synthase 1~ SPDSYN1~ fragment;original_location=join(186962..187070%2C188251..188327%2C188437..188559%2C189041..189145%2C189473..189545%2C189642..189713%2C189791..190140);owner=coffea | |
| 71894 chr11 manual_curation exon 31155596 31155948 . - . Parent=GSCOCT00032046001 | |
| 71895 chr11 manual_curation exon 31154339 31154415 . - . Parent=GSCOCT00032046001 | |
| 71896 chr11 manual_curation exon 31154107 31154229 . - . Parent=GSCOCT00032046001 | |
| 71897 chr11 manual_curation exon 31153521 31153625 . - . Parent=GSCOCT00032046001 | |
| 71898 chr11 manual_curation exon 31153121 31153193 . - . Parent=GSCOCT00032046001 | |
| 71899 chr11 manual_curation exon 31152953 31153024 . - . Parent=GSCOCT00032046001 | |
| 71900 chr11 manual_curation exon 31152526 31152875 . - . Parent=GSCOCT00032046001 | |
| 71901 chr11 manual_curation CDS 31155596 31155704 . - 0 Parent=GSCOCT00032046001 | |
| 71902 chr11 manual_curation CDS 31154339 31154415 . - 1 Parent=GSCOCT00032046001 | |
| 71903 chr11 manual_curation CDS 31154107 31154229 . - 0 Parent=GSCOCT00032046001 | |
| 71904 chr11 manual_curation CDS 31153521 31153625 . - 0 Parent=GSCOCT00032046001 | |
| 71905 chr11 manual_curation CDS 31153121 31153193 . - 0 Parent=GSCOCT00032046001 | |
| 71906 chr11 manual_curation CDS 31152953 31153024 . - 1 Parent=GSCOCT00032046001 | |
| 71907 chr11 manual_curation CDS 31152526 31152875 . - 1 Parent=GSCOCT00032046001 | |
| 71908 chr11 manual_curation gene 31159261 31163677 . + . ID=GSCOCG00032045001;Name=Cc11_g14540 | |
| 71909 chr11 manual_curation mRNA 31159261 31163677 . + . ID=GSCOCT00032045001;Parent=GSCOCG00032045001;Name=Cc11_g14540 | |
| 71910 chr11 manual_curation polypeptide 31159635 31163318 . + . ID=GSCOCP00032045001;Dbxref=InterPro:IPR002687,InterPro:IPR012976,InterPro:IPR019175,PFAM:PF01798,PFAM:PF08060,PFAM:PF09785,SwissProt:Q5U5C5,SwissProt:Q6NVP6,SwissProt:Q8CCF0,TAIR:AT1G60170.1,TAIR:AT1G70400.3,TAIR:AT5G27120.1,TrEMBL:B9GR58,TrEMBL:B9I922,TrEMBL:I1N7K6;Derives_from=GSCOCT00032045001;Name=Cc11_g14540;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative U4/U6 small nuclear ribonucleoprotein Prp31,CC_functional_completeness:complete,CC_gene:Prpf31,CC_gene:prpf31;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032045001~ Putative U4/U6 small nuclear ribonucleoprotein Prp31~ Prpf31~ complete;original_location=complement(join(183018..183031%2C182922..182973%2C182577..182642%2C182302..182439%2C181281..182173%2C181113..181183%2C180475..180577%2C180242..180317%2C179348..179455));owner=coffea | |
| 71911 chr11 manual_curation exon 31163211 31163677 . + . Parent=GSCOCT00032045001 | |
| 71912 chr11 manual_curation exon 31162349 31162424 . + . Parent=GSCOCT00032045001 | |
| 71913 chr11 manual_curation exon 31162089 31162191 . + . Parent=GSCOCT00032045001 | |
| 71914 chr11 manual_curation exon 31161483 31161553 . + . Parent=GSCOCT00032045001 | |
| 71915 chr11 manual_curation exon 31160493 31161385 . + . Parent=GSCOCT00032045001 | |
| 71916 chr11 manual_curation exon 31160227 31160364 . + . Parent=GSCOCT00032045001 | |
| 71917 chr11 manual_curation exon 31160024 31160089 . + . Parent=GSCOCT00032045001 | |
| 71918 chr11 manual_curation exon 31159693 31159744 . + . Parent=GSCOCT00032045001 | |
| 71919 chr11 manual_curation exon 31159261 31159648 . + . Parent=GSCOCT00032045001 | |
| 71920 chr11 manual_curation CDS 31163211 31163318 . + 0 Parent=GSCOCT00032045001 | |
| 71921 chr11 manual_curation CDS 31162349 31162424 . + 2 Parent=GSCOCT00032045001 | |
| 71922 chr11 manual_curation CDS 31162089 31162191 . + 1 Parent=GSCOCT00032045001 | |
| 71923 chr11 manual_curation CDS 31161483 31161553 . + 2 Parent=GSCOCT00032045001 | |
| 71924 chr11 manual_curation CDS 31160493 31161385 . + 0 Parent=GSCOCT00032045001 | |
| 71925 chr11 manual_curation CDS 31160227 31160364 . + 0 Parent=GSCOCT00032045001 | |
| 71926 chr11 manual_curation CDS 31160024 31160089 . + 0 Parent=GSCOCT00032045001 | |
| 71927 chr11 manual_curation CDS 31159693 31159744 . + 2 Parent=GSCOCT00032045001 | |
| 71928 chr11 manual_curation CDS 31159635 31159648 . + 0 Parent=GSCOCT00032045001 | |
| 71929 chr11 manual_curation gene 31167243 31171142 . + . ID=GSCOCG00032044001;Name=Cc11_g14550 | |
| 71930 chr11 manual_curation mRNA 31167243 31171142 . + . ID=GSCOCT00032044001;Parent=GSCOCG00032044001;Name=Cc11_g14550 | |
| 71931 chr11 manual_curation polypeptide 31167421 31171142 . + . ID=GSCOCP00032044001;Dbxref=GENE3D:G3DSA:3.40.605.10,InterPro:IPR015590,InterPro:IPR016160,InterPro:IPR016161,InterPro:IPR016162,PANTHER:PTHR11699,PFAM:PF00171,PROSITE:PS00070,PROSITE:PS00687,SUPERFAMILY:SSF53720,SwissProt:Q2XQV4,SwissProt:Q8S528,SwissProt:Q9SU63,TAIR:AT1G23800.1,TAIR:AT3G24503.1,TAIR:AT3G48000.1,TrEMBL:C7A2A0,TrEMBL:I1J5A5,TrEMBL:I1JC17;Derives_from=GSCOCT00032044001;Name=Cc11_g14550;Ontology_term=CC_evidence_code:ISS,GO:0008152,GO:0016491,GO:0055114,CC_EC_number:1.2.1.3,PRODUCT:Aldehyde dehydrogenase family 2 member B7%2C mitochondrial,CC_functional_completeness:complete,CC_gene:ALDH2B7,CC_gene:ALDH2B4,CC_gene:ALDH2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032044001~ Aldehyde dehydrogenase family 2 member B7%2C mitochondrial~ ALDH2B7~ complete;original_location=complement(join(175167..175245%2C174167..174301%2C173931..174073%2C173700..173853%2C173381..173610%2C173155..173244%2C172666..172839%2C172441..172578%2C172035..172172%2C171888..171949%2C171524..171797));owner=coffea | |
| 71932 chr11 manual_curation exon 31170869 31171142 . + . Parent=GSCOCT00032044001 | |
| 71933 chr11 manual_curation exon 31170717 31170778 . + . Parent=GSCOCT00032044001 | |
| 71934 chr11 manual_curation exon 31170494 31170631 . + . Parent=GSCOCT00032044001 | |
| 71935 chr11 manual_curation exon 31170088 31170225 . + . Parent=GSCOCT00032044001 | |
| 71936 chr11 manual_curation exon 31169827 31170000 . + . Parent=GSCOCT00032044001 | |
| 71937 chr11 manual_curation exon 31169422 31169511 . + . Parent=GSCOCT00032044001 | |
| 71938 chr11 manual_curation exon 31169056 31169285 . + . Parent=GSCOCT00032044001 | |
| 71939 chr11 manual_curation exon 31168813 31168966 . + . Parent=GSCOCT00032044001 | |
| 71940 chr11 manual_curation exon 31168593 31168735 . + . Parent=GSCOCT00032044001 | |
| 71941 chr11 manual_curation exon 31168365 31168499 . + . Parent=GSCOCT00032044001 | |
| 71942 chr11 manual_curation exon 31167243 31167499 . + . Parent=GSCOCT00032044001 | |
| 71943 chr11 manual_curation CDS 31170869 31171142 . + 2 Parent=GSCOCT00032044001 | |
| 71944 chr11 manual_curation CDS 31170717 31170778 . + 0 Parent=GSCOCT00032044001 | |
| 71945 chr11 manual_curation CDS 31170494 31170631 . + 0 Parent=GSCOCT00032044001 | |
| 71946 chr11 manual_curation CDS 31170088 31170225 . + 0 Parent=GSCOCT00032044001 | |
| 71947 chr11 manual_curation CDS 31169827 31170000 . + 0 Parent=GSCOCT00032044001 | |
| 71948 chr11 manual_curation CDS 31169422 31169511 . + 0 Parent=GSCOCT00032044001 | |
| 71949 chr11 manual_curation CDS 31169056 31169285 . + 1 Parent=GSCOCT00032044001 | |
| 71950 chr11 manual_curation CDS 31168813 31168966 . + 0 Parent=GSCOCT00032044001 | |
| 71951 chr11 manual_curation CDS 31168593 31168735 . + 1 Parent=GSCOCT00032044001 | |
| 71952 chr11 manual_curation CDS 31168365 31168499 . + 1 Parent=GSCOCT00032044001 | |
| 71953 chr11 manual_curation CDS 31167421 31167499 . + 0 Parent=GSCOCT00032044001 | |
| 71954 chr11 manual_curation gene 31173044 31174596 . - . ID=GSCOCG00032042001;Name=Cc11_g14560 | |
| 71955 chr11 manual_curation mRNA 31173044 31174596 . - . ID=GSCOCT00032042001;Parent=GSCOCG00032042001;Name=Cc11_g14560 | |
| 71956 chr11 manual_curation polypeptide 31173184 31174596 . - . ID=GSCOCP00032042001;Dbxref=GENE3D:G3DSA:2.60.120.200,InterPro:IPR000757,InterPro:IPR008985,InterPro:IPR010713,InterPro:IPR013320,InterPro:IPR016455,PFAM:PF00722,PFAM:PF06955,PIR:PIRSF005604,SUPERFAMILY:SSF49899,SwissProt:Q38909,SwissProt:Q8LC45,SwissProt:Q8LDS2,TAIR:AT1G10550.1,TAIR:AT1G14720.1,TAIR:AT2G01850.1,TrEMBL:A2TEI4,TrEMBL:D7TNR2,TrEMBL:Q3HNW2;Derives_from=GSCOCT00032042001;Name=Cc11_g14560;Ontology_term=CC_evidence_code:ISS,GO:0005618,GO:0005975,GO:0006073,GO:0016762,GO:0048046,CC_EC_number:2.4.1.207,PRODUCT:Probable xyloglucan endotransglucosylase/hydrolase protein 33,CC_functional_completeness:complete,CC_gene:XTH33,CC_gene:XTH28,CC_gene:XTH27;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032042001~ Probable xyloglucan endotransglucosylase/hydrolase protein 33~ XTH33~ complete;original_location=join(168070..168298%2C168415..168515%2C168755..168963%2C169086..169482);owner=coffea | |
| 71957 chr11 manual_curation exon 31174368 31174596 . - . Parent=GSCOCT00032042001 | |
| 71958 chr11 manual_curation exon 31174151 31174251 . - . Parent=GSCOCT00032042001 | |
| 71959 chr11 manual_curation exon 31173703 31173911 . - . Parent=GSCOCT00032042001 | |
| 71960 chr11 manual_curation exon 31173044 31173580 . - . Parent=GSCOCT00032042001 | |
| 71961 chr11 manual_curation CDS 31174368 31174596 . - 0 Parent=GSCOCT00032042001 | |
| 71962 chr11 manual_curation CDS 31174151 31174251 . - 1 Parent=GSCOCT00032042001 | |
| 71963 chr11 manual_curation CDS 31173703 31173911 . - 0 Parent=GSCOCT00032042001 | |
| 71964 chr11 manual_curation CDS 31173184 31173580 . - 2 Parent=GSCOCT00032042001 | |
| 71965 chr11 manual_curation gene 31178811 31180865 . + . ID=GSCOCG00032041001;Name=Cc11_g14570 | |
| 71966 chr11 manual_curation mRNA 31178811 31180865 . + . ID=GSCOCT00032041001;Parent=GSCOCG00032041001;Name=Cc11_g14570 | |
| 71967 chr11 manual_curation polypeptide 31178811 31180865 . + . ID=GSCOCP00032041001;Dbxref=GENE3D:G3DSA:1.25.10.10,InterPro:IPR000225,InterPro:IPR003613,InterPro:IPR011989,InterPro:IPR016024,PFAM:PF00514,PFAM:PF04564,PROFILE:PS50176,SMART:SM00185,SMART:SM00504,SUPERFAMILY:SSF48371,SwissProt:O80742,SwissProt:Q9LZW3,SwissProt:Q9XIJ5,TAIR:AT1G10560.1,TAIR:AT1G60190.1,TAIR:AT5G01830.1,TrEMBL:B9IEP9,TrEMBL:D7TNR3,TrEMBL:F6GSS2;Derives_from=GSCOCT00032041001;Name=Cc11_g14570;Ontology_term=CC_evidence_code:ISS,GO:0000151,GO:0004842,GO:0005488,GO:0016567,CC_EC_number:missing_EC_number,PRODUCT:Putative U-box domain-containing protein 19,CC_functional_completeness:complete,CC_gene:PUB19,CC_gene:PUB18,CC_gene:PUB16;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032041001~ Putative U-box domain-containing protein 19~ PUB19~ complete;original_location=complement(161801..163855);owner=coffea | |
| 71968 chr11 manual_curation exon 31178811 31180865 . + . Parent=GSCOCT00032041001 | |
| 71969 chr11 manual_curation CDS 31178811 31180865 . + 0 Parent=GSCOCT00032041001 | |
| 71970 chr11 manual_curation gene 31181421 31184064 . - . ID=GSCOCG00032040001;Name=Cc11_g14580 | |
| 71971 chr11 manual_curation mRNA 31181421 31184064 . - . ID=GSCOCT00032040001;Parent=GSCOCG00032040001;Name=Cc11_g14580 | |
| 71972 chr11 manual_curation polypeptide 31181421 31184064 . - . ID=GSCOCP00032040001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q8L4H4,SwissProt:Q8LKZ1,SwissProt:Q9SA72,TAIR:AT1G30570.1,TAIR:AT5G18500.1,TAIR:AT5G39000.1,TrEMBL:A5B4V2,TrEMBL:B9RUB2,TrEMBL:F6HV09;Derives_from=GSCOCT00032040001;Name=Cc11_g14580;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:NORK,CC_gene:At1g30570;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032040001~ Putative uncharacterized protein~ NORK~ complete;original_location=join(158602..159247%2C159422..159613%2C159696..159809%2C160180..160398%2C160470..160585%2C160668..160928%2C161024..161245);owner=coffea | |
| 71973 chr11 manual_curation exon 31183419 31184064 . - . Parent=GSCOCT00032040001 | |
| 71974 chr11 manual_curation exon 31183053 31183244 . - . Parent=GSCOCT00032040001 | |
| 71975 chr11 manual_curation exon 31182857 31182970 . - . Parent=GSCOCT00032040001 | |
| 71976 chr11 manual_curation exon 31182268 31182486 . - . Parent=GSCOCT00032040001 | |
| 71977 chr11 manual_curation exon 31182081 31182196 . - . Parent=GSCOCT00032040001 | |
| 71978 chr11 manual_curation exon 31181738 31181998 . - . Parent=GSCOCT00032040001 | |
| 71979 chr11 manual_curation exon 31181421 31181642 . - . Parent=GSCOCT00032040001 | |
| 71980 chr11 manual_curation CDS 31183419 31184064 . - 0 Parent=GSCOCT00032040001 | |
| 71981 chr11 manual_curation CDS 31183053 31183244 . - 1 Parent=GSCOCT00032040001 | |
| 71982 chr11 manual_curation CDS 31182857 31182970 . - 1 Parent=GSCOCT00032040001 | |
| 71983 chr11 manual_curation CDS 31182268 31182486 . - 1 Parent=GSCOCT00032040001 | |
| 71984 chr11 manual_curation CDS 31182081 31182196 . - 1 Parent=GSCOCT00032040001 | |
| 71985 chr11 manual_curation CDS 31181738 31181998 . - 0 Parent=GSCOCT00032040001 | |
| 71986 chr11 manual_curation CDS 31181421 31181642 . - 0 Parent=GSCOCT00032040001 | |
| 71987 chr11 manual_curation gene 31186207 31190042 . + . ID=GSCOCG00032039001;Name=Cc11_g14590 | |
| 71988 chr11 manual_curation mRNA 31186207 31190042 . + . ID=GSCOCT00032039001;Parent=GSCOCG00032039001;Name=Cc11_g14590 | |
| 71989 chr11 manual_curation polypeptide 31186792 31189729 . + . ID=GSCOCP00032039001;Dbxref=InterPro:IPR002259,PANTHER:PTHR10332,PFAM:PF01733,SwissProt:A1L272,SwissProt:Q7RTT9,SwissProt:Q8R139,TAIR:AT1G02630.1,TAIR:AT1G70330.1,TAIR:AT4G05120.1,TrEMBL:B9SH79,TrEMBL:F6HPN4,TrEMBL:F6IA07;Derives_from=GSCOCT00032039001;Name=Cc11_g14590;Ontology_term=CC_evidence_code:ISS,GO:0005337,GO:0006810,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Putative Equilibrative nucleoside transporter 4,CC_functional_completeness:fragment,CC_gene:slc29a4,CC_gene:SLC29A4,CC_gene:Slc29a4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032039001~ Putative Equilibrative nucleoside transporter 4~ slc29a4~ fragment;original_location=complement(join(155577..155874%2C152937..153667));owner=coffea | |
| 71990 chr11 manual_curation exon 31188999 31190042 . + . Parent=GSCOCT00032039001 | |
| 71991 chr11 manual_curation exon 31186207 31187089 . + . Parent=GSCOCT00032039001 | |
| 71992 chr11 manual_curation CDS 31188999 31189729 . + 1 Parent=GSCOCT00032039001 | |
| 71993 chr11 manual_curation CDS 31186792 31187089 . + 0 Parent=GSCOCT00032039001 | |
| 71994 chr11 manual_curation gene 31194857 31207693 . + . ID=GSCOCG00032038001;Name=Cc11_g14600 | |
| 71995 chr11 manual_curation mRNA 31194857 31207693 . + . ID=GSCOCT00032038001;Parent=GSCOCG00032038001;Name=Cc11_g14600 | |
| 71996 chr11 manual_curation polypeptide 31195213 31207079 . + . ID=GSCOCP00032038001;Dbxref=GENE3D:G3DSA:1.20.920.10,InterPro:IPR001487,InterPro:IPR001739,InterPro:IPR001965,InterPro:IPR003889,InterPro:IPR011011,InterPro:IPR019786,InterPro:IPR019787,PFAM:PF00439,PFAM:PF00628,PFAM:PF01429,PFAM:PF05965,PROFILE:PS50014,PROFILE:PS50016,PROSITE:PS01359,SMART:SM00249,SMART:SM00297,SUPERFAMILY:SSF47370,SUPERFAMILY:SSF57903,SwissProt:P29375,SwissProt:Q6IQX0,SwissProt:Q9SGH2,TAIR:AT1G77250.1,TAIR:AT3G01460.1,TrEMBL:B9RUU8,TrEMBL:D7L9P7,TrEMBL:F6HPN6;Derives_from=GSCOCT00032038001;Name=Cc11_g14600;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0005515,GO:0005634,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative Methyl-CpG-binding domain-containing protein 9,CC_functional_completeness:complete,CC_gene:MBD9,CC_gene:kdm5bb,CC_gene:KDM5A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032038001~ Putative Methyl-CpG-binding domain-containing protein 9~ MBD9~ complete;original_location=complement(join(146972..147453%2C144776..145403%2C143484..144575%2C142815..143402%2C142321..142626%2C141771..142106%2C140857..140955%2C140095..140535%2C136765..138957%2C135587..135943));owner=coffea | |
| 71997 chr11 manual_curation exon 31206723 31207693 . + . Parent=GSCOCT00032038001 | |
| 71998 chr11 manual_curation exon 31203709 31205901 . + . Parent=GSCOCT00032038001 | |
| 71999 chr11 manual_curation exon 31202131 31202571 . + . Parent=GSCOCT00032038001 | |
| 72000 chr11 manual_curation exon 31201711 31201809 . + . Parent=GSCOCT00032038001 | |
| 72001 chr11 manual_curation exon 31200560 31200895 . + . Parent=GSCOCT00032038001 | |
| 72002 chr11 manual_curation exon 31200040 31200345 . + . Parent=GSCOCT00032038001 | |
| 72003 chr11 manual_curation exon 31199264 31199851 . + . Parent=GSCOCT00032038001 | |
| 72004 chr11 manual_curation exon 31198091 31199182 . + . Parent=GSCOCT00032038001 | |
| 72005 chr11 manual_curation exon 31197263 31197890 . + . Parent=GSCOCT00032038001 | |
| 72006 chr11 manual_curation exon 31194857 31195694 . + . Parent=GSCOCT00032038001 | |
| 72007 chr11 manual_curation CDS 31206723 31207079 . + 0 Parent=GSCOCT00032038001 | |
| 72008 chr11 manual_curation CDS 31203709 31205901 . + 0 Parent=GSCOCT00032038001 | |
| 72009 chr11 manual_curation CDS 31202131 31202571 . + 0 Parent=GSCOCT00032038001 | |
| 72010 chr11 manual_curation CDS 31201711 31201809 . + 0 Parent=GSCOCT00032038001 | |
| 72011 chr11 manual_curation CDS 31200560 31200895 . + 0 Parent=GSCOCT00032038001 | |
| 72012 chr11 manual_curation CDS 31200040 31200345 . + 0 Parent=GSCOCT00032038001 | |
| 72013 chr11 manual_curation CDS 31199264 31199851 . + 0 Parent=GSCOCT00032038001 | |
| 72014 chr11 manual_curation CDS 31198091 31199182 . + 0 Parent=GSCOCT00032038001 | |
| 72015 chr11 manual_curation CDS 31197263 31197890 . + 2 Parent=GSCOCT00032038001 | |
| 72016 chr11 manual_curation CDS 31195213 31195694 . + 0 Parent=GSCOCT00032038001 | |
| 72017 chr11 manual_curation gene 31208457 31214631 . - . ID=GSCOCG00032036001;Name=Cc11_g14610 | |
| 72018 chr11 manual_curation mRNA 31208457 31214631 . - . ID=GSCOCT00032036001;Parent=GSCOCG00032036001;Name=Cc11_g14610 | |
| 72019 chr11 manual_curation polypeptide 31208921 31214555 . - . ID=GSCOCP00032036001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR002483,InterPro:IPR012677,PFAM:PF00076,PFAM:PF01480,PROFILE:PS50102,PROFILE:PS51025,SMART:SM00311,SMART:SM00360,SwissProt:P49756,TAIR:AT1G60200.1,TrEMBL:B9HVB3,TrEMBL:B9SH84,TrEMBL:F6HPN7;Derives_from=GSCOCT00032036001;Name=Cc11_g14610;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,GO:0006397,CC_EC_number:missing_EC_number,PRODUCT:Putative splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein,CC_functional_completeness:complete,CC_gene:RBM25;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032036001~ Putative splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein~ RBM25~ complete;original_location=join(128111..128678%2C130077..130327%2C130469..130621%2C131133..131583%2C131683..132336%2C132434..133041%2C133494..133745);owner=coffea | |
| 72020 chr11 manual_curation exon 31213988 31214631 . - . Parent=GSCOCT00032036001 | |
| 72021 chr11 manual_curation exon 31212339 31212589 . - . Parent=GSCOCT00032036001 | |
| 72022 chr11 manual_curation exon 31212045 31212197 . - . Parent=GSCOCT00032036001 | |
| 72023 chr11 manual_curation exon 31211083 31211533 . - . Parent=GSCOCT00032036001 | |
| 72024 chr11 manual_curation exon 31210330 31210983 . - . Parent=GSCOCT00032036001 | |
| 72025 chr11 manual_curation exon 31209625 31210232 . - . Parent=GSCOCT00032036001 | |
| 72026 chr11 manual_curation exon 31208457 31209172 . - . Parent=GSCOCT00032036001 | |
| 72027 chr11 manual_curation CDS 31213988 31214555 . - 0 Parent=GSCOCT00032036001 | |
| 72028 chr11 manual_curation CDS 31212339 31212589 . - 1 Parent=GSCOCT00032036001 | |
| 72029 chr11 manual_curation CDS 31212045 31212197 . - 0 Parent=GSCOCT00032036001 | |
| 72030 chr11 manual_curation CDS 31211083 31211533 . - 0 Parent=GSCOCT00032036001 | |
| 72031 chr11 manual_curation CDS 31210330 31210983 . - 1 Parent=GSCOCT00032036001 | |
| 72032 chr11 manual_curation CDS 31209625 31210232 . - 1 Parent=GSCOCT00032036001 | |
| 72033 chr11 manual_curation CDS 31208921 31209172 . - 0 Parent=GSCOCT00032036001 | |
| 72034 chr11 manual_curation gene 31220980 31222733 . + . ID=GSCOCG00032034001;Name=Cc11_g14620 | |
| 72035 chr11 manual_curation mRNA 31220980 31222733 . + . ID=GSCOCT00032034001;Parent=GSCOCG00032034001;Name=Cc11_g14620 | |
| 72036 chr11 manual_curation polypeptide 31220980 31222311 . + . ID=GSCOCP00032034001;Derives_from=GSCOCT00032034001;Name=Cc11_g14620;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032034001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(121339..121686%2C120355..120870));owner=coffea | |
| 72037 chr11 manual_curation exon 31221796 31222733 . + . Parent=GSCOCT00032034001 | |
| 72038 chr11 manual_curation exon 31220980 31221327 . + . Parent=GSCOCT00032034001 | |
| 72039 chr11 manual_curation CDS 31221796 31222311 . + 0 Parent=GSCOCT00032034001 | |
| 72040 chr11 manual_curation CDS 31220980 31221327 . + 0 Parent=GSCOCT00032034001 | |
| 72041 chr11 manual_curation gene 31227231 31233776 . + . ID=GSCOCG00032032001;Name=Cc11_g14630 | |
| 72042 chr11 manual_curation mRNA 31227231 31233776 . + . ID=GSCOCT00032032001;Parent=GSCOCG00032032001;Name=Cc11_g14630 | |
| 72043 chr11 manual_curation polypeptide 31227231 31233314 . + . ID=GSCOCP00032032001;Dbxref=InterPro:IPR003653,PFAM:PF02902,PROFILE:PS50600,SwissProt:Q2PS26,SwissProt:Q8L7S0,SwissProt:Q8RWN0,TAIR:AT1G09730.1,TAIR:AT1G10570.1,TAIR:AT1G60220.1,TrEMBL:B9SH87,TrEMBL:D7KXB3,TrEMBL:D7TNR9;Derives_from=GSCOCT00032032001;Name=Cc11_g14630;Ontology_term=CC_evidence_code:ISS,GO:0006508,GO:0008234,CC_EC_number:missing_EC_number,PRODUCT:Ubiquitin-like-specific protease 1D,CC_functional_completeness:fragment,CC_gene:ULP1D,CC_gene:ULP1C,CC_gene:ULP2B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032032001~ Ubiquitin-like-specific protease 1D~ ULP1D~ fragment;original_location=complement(join(115296..115435%2C114214..114262%2C113403..113476%2C113294..113323%2C113091..113189%2C112552..112663%2C111694..111785%2C110233..110355%2C109890..110004%2C109635..109742%2C109352..109474));owner=coffea | |
| 72044 chr11 manual_curation exon 31233192 31233776 . + . Parent=GSCOCT00032032001 | |
| 72045 chr11 manual_curation exon 31232924 31233031 . + . Parent=GSCOCT00032032001 | |
| 72046 chr11 manual_curation exon 31232662 31232776 . + . Parent=GSCOCT00032032001 | |
| 72047 chr11 manual_curation exon 31232311 31232433 . + . Parent=GSCOCT00032032001 | |
| 72048 chr11 manual_curation exon 31230881 31230972 . + . Parent=GSCOCT00032032001 | |
| 72049 chr11 manual_curation exon 31230003 31230114 . + . Parent=GSCOCT00032032001 | |
| 72050 chr11 manual_curation exon 31229477 31229575 . + . Parent=GSCOCT00032032001 | |
| 72051 chr11 manual_curation exon 31229343 31229372 . + . Parent=GSCOCT00032032001 | |
| 72052 chr11 manual_curation exon 31229190 31229263 . + . Parent=GSCOCT00032032001 | |
| 72053 chr11 manual_curation exon 31228404 31228452 . + . Parent=GSCOCT00032032001 | |
| 72054 chr11 manual_curation exon 31227231 31227370 . + . Parent=GSCOCT00032032001 | |
| 72055 chr11 manual_curation CDS 31233192 31233314 . + 0 Parent=GSCOCT00032032001 | |
| 72056 chr11 manual_curation CDS 31232924 31233031 . + 0 Parent=GSCOCT00032032001 | |
| 72057 chr11 manual_curation CDS 31232662 31232776 . + 2 Parent=GSCOCT00032032001 | |
| 72058 chr11 manual_curation CDS 31232311 31232433 . + 2 Parent=GSCOCT00032032001 | |
| 72059 chr11 manual_curation CDS 31230881 31230972 . + 0 Parent=GSCOCT00032032001 | |
| 72060 chr11 manual_curation CDS 31230003 31230114 . + 2 Parent=GSCOCT00032032001 | |
| 72061 chr11 manual_curation CDS 31229477 31229575 . + 2 Parent=GSCOCT00032032001 | |
| 72062 chr11 manual_curation CDS 31229343 31229372 . + 2 Parent=GSCOCT00032032001 | |
| 72063 chr11 manual_curation CDS 31229190 31229263 . + 0 Parent=GSCOCT00032032001 | |
| 72064 chr11 manual_curation CDS 31228404 31228452 . + 2 Parent=GSCOCT00032032001 | |
| 72065 chr11 manual_curation CDS 31227231 31227370 . + 0 Parent=GSCOCT00032032001 | |
| 72066 chr11 manual_curation gene 31237835 31244889 . + . ID=GSCOCG00032031001;Name=Cc11_g14640 | |
| 72067 chr11 manual_curation mRNA 31237835 31244889 . + . ID=GSCOCT00032031001;Parent=GSCOCG00032031001;Name=Cc11_g14640 | |
| 72068 chr11 manual_curation polypeptide 31237927 31244561 . + . ID=GSCOCP00032031001;Dbxref=InterPro:IPR003607,InterPro:IPR006674,PFAM:PF01966,SMART:SM00471,SwissProt:B0G107,SwissProt:Q502K2,SwissProt:Q5ZJL9,TAIR:AT5G40270.1,TAIR:AT5G40290.1,TrEMBL:B9HQU4,TrEMBL:D7MJA0,TrEMBL:Q9FL05;Derives_from=GSCOCT00032031001;Name=Cc11_g14640;Ontology_term=CC_evidence_code:ISS,GO:0003824,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein SAMHD1 homolog,CC_functional_completeness:complete,CC_gene:DDB_G0272484,CC_gene:SAMHD1,CC_gene:samhd1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032031001~ Putative Protein SAMHD1 homolog~ DDB_G0272484~ complete;original_location=complement(join(104620..104739%2C103673..103714%2C102327..102345%2C101939..102045%2C101807..101858%2C101647..101731%2C101064..101154%2C100655..100690%2C100472..100539%2C100314..100376%2C100025..100080%2C99867..99940%2C99676..99768%2C99481..99582%2C99288..99368%2C99095..99208%2C98329..98439%2C98105..98212));owner=coffea | |
| 72069 chr11 manual_curation exon 31244454 31244889 . + . Parent=GSCOCT00032031001 | |
| 72070 chr11 manual_curation exon 31244227 31244337 . + . Parent=GSCOCT00032031001 | |
| 72071 chr11 manual_curation exon 31243458 31243571 . + . Parent=GSCOCT00032031001 | |
| 72072 chr11 manual_curation exon 31243298 31243378 . + . Parent=GSCOCT00032031001 | |
| 72073 chr11 manual_curation exon 31243084 31243185 . + . Parent=GSCOCT00032031001 | |
| 72074 chr11 manual_curation exon 31242898 31242990 . + . Parent=GSCOCT00032031001 | |
| 72075 chr11 manual_curation exon 31242726 31242799 . + . Parent=GSCOCT00032031001 | |
| 72076 chr11 manual_curation exon 31242586 31242641 . + . Parent=GSCOCT00032031001 | |
| 72077 chr11 manual_curation exon 31242290 31242352 . + . Parent=GSCOCT00032031001 | |
| 72078 chr11 manual_curation exon 31242127 31242194 . + . Parent=GSCOCT00032031001 | |
| 72079 chr11 manual_curation exon 31241976 31242011 . + . Parent=GSCOCT00032031001 | |
| 72080 chr11 manual_curation exon 31241512 31241602 . + . Parent=GSCOCT00032031001 | |
| 72081 chr11 manual_curation exon 31240935 31241019 . + . Parent=GSCOCT00032031001 | |
| 72082 chr11 manual_curation exon 31240808 31240859 . + . Parent=GSCOCT00032031001 | |
| 72083 chr11 manual_curation exon 31240621 31240727 . + . Parent=GSCOCT00032031001 | |
| 72084 chr11 manual_curation exon 31240321 31240339 . + . Parent=GSCOCT00032031001 | |
| 72085 chr11 manual_curation exon 31238952 31238993 . + . Parent=GSCOCT00032031001 | |
| 72086 chr11 manual_curation exon 31237835 31238046 . + . Parent=GSCOCT00032031001 | |
| 72087 chr11 manual_curation CDS 31244454 31244561 . + 0 Parent=GSCOCT00032031001 | |
| 72088 chr11 manual_curation CDS 31244227 31244337 . + 0 Parent=GSCOCT00032031001 | |
| 72089 chr11 manual_curation CDS 31243458 31243571 . + 0 Parent=GSCOCT00032031001 | |
| 72090 chr11 manual_curation CDS 31243298 31243378 . + 0 Parent=GSCOCT00032031001 | |
| 72091 chr11 manual_curation CDS 31243084 31243185 . + 0 Parent=GSCOCT00032031001 | |
| 72092 chr11 manual_curation CDS 31242898 31242990 . + 0 Parent=GSCOCT00032031001 | |
| 72093 chr11 manual_curation CDS 31242726 31242799 . + 1 Parent=GSCOCT00032031001 | |
| 72094 chr11 manual_curation CDS 31242586 31242641 . + 2 Parent=GSCOCT00032031001 | |
| 72095 chr11 manual_curation CDS 31242290 31242352 . + 2 Parent=GSCOCT00032031001 | |
| 72096 chr11 manual_curation CDS 31242127 31242194 . + 0 Parent=GSCOCT00032031001 | |
| 72097 chr11 manual_curation CDS 31241976 31242011 . + 0 Parent=GSCOCT00032031001 | |
| 72098 chr11 manual_curation CDS 31241512 31241602 . + 2 Parent=GSCOCT00032031001 | |
| 72099 chr11 manual_curation CDS 31240935 31241019 . + 1 Parent=GSCOCT00032031001 | |
| 72100 chr11 manual_curation CDS 31240808 31240859 . + 0 Parent=GSCOCT00032031001 | |
| 72101 chr11 manual_curation CDS 31240621 31240727 . + 1 Parent=GSCOCT00032031001 | |
| 72102 chr11 manual_curation CDS 31240321 31240339 . + 0 Parent=GSCOCT00032031001 | |
| 72103 chr11 manual_curation CDS 31238952 31238993 . + 0 Parent=GSCOCT00032031001 | |
| 72104 chr11 manual_curation CDS 31237927 31238046 . + 0 Parent=GSCOCT00032031001 | |
| 72105 chr11 manual_curation gene 31247865 31251734 . - . ID=GSCOCG00032029001;Name=Cc11_g14650 | |
| 72106 chr11 manual_curation mRNA 31247865 31251734 . - . ID=GSCOCT00032029001;Parent=GSCOCG00032029001;Name=Cc11_g14650 | |
| 72107 chr11 manual_curation polypeptide 31248304 31251591 . - . ID=GSCOCP00032029001;Dbxref=InterPro:IPR004383,InterPro:IPR007197,PFAM:PF04055,SwissProt:A0LQM1,SwissProt:A1AL40,SwissProt:Q74E53,TAIR:AT1G60230.1,TAIR:AT2G39670.2,TAIR:AT3G19630.1,TIGRFAMs:TIGR00048,TrEMBL:D7KXB2,TrEMBL:D7TNS3,TrEMBL:I1KXG4;Derives_from=GSCOCT00032029001;Name=Cc11_g14650;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005737,GO:0006364,GO:0008173,GO:0051536,CC_EC_number:missing_EC_number,PRODUCT:Putative Ribosomal RNA large subunit methyltransferase N,CC_functional_completeness:modules,CC_gene:rlmN;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032029001~ Putative Ribosomal RNA large subunit methyltransferase N~ rlmN~ modules;original_location=join(91075..91282%2C91379..91461%2C92427..92529%2C92742..92839%2C92960..93111%2C93174..93282%2C93498..93689%2C93764..93900%2C94074..94362);owner=coffea | |
| 72108 chr11 manual_curation exon 31251384 31251734 . - . Parent=GSCOCT00032029001 | |
| 72109 chr11 manual_curation exon 31251205 31251287 . - . Parent=GSCOCT00032029001 | |
| 72110 chr11 manual_curation exon 31250137 31250239 . - . Parent=GSCOCT00032029001 | |
| 72111 chr11 manual_curation exon 31249827 31249924 . - . Parent=GSCOCT00032029001 | |
| 72112 chr11 manual_curation exon 31249555 31249706 . - . Parent=GSCOCT00032029001 | |
| 72113 chr11 manual_curation exon 31249384 31249492 . - . Parent=GSCOCT00032029001 | |
| 72114 chr11 manual_curation exon 31248977 31249168 . - . Parent=GSCOCT00032029001 | |
| 72115 chr11 manual_curation exon 31248766 31248902 . - . Parent=GSCOCT00032029001 | |
| 72116 chr11 manual_curation exon 31247865 31248592 . - . Parent=GSCOCT00032029001 | |
| 72117 chr11 manual_curation CDS 31251384 31251591 . - 0 Parent=GSCOCT00032029001 | |
| 72118 chr11 manual_curation CDS 31251205 31251287 . - 1 Parent=GSCOCT00032029001 | |
| 72119 chr11 manual_curation CDS 31250137 31250239 . - 0 Parent=GSCOCT00032029001 | |
| 72120 chr11 manual_curation CDS 31249827 31249924 . - 1 Parent=GSCOCT00032029001 | |
| 72121 chr11 manual_curation CDS 31249555 31249706 . - 0 Parent=GSCOCT00032029001 | |
| 72122 chr11 manual_curation CDS 31249384 31249492 . - 2 Parent=GSCOCT00032029001 | |
| 72123 chr11 manual_curation CDS 31248977 31249168 . - 0 Parent=GSCOCT00032029001 | |
| 72124 chr11 manual_curation CDS 31248766 31248902 . - 0 Parent=GSCOCT00032029001 | |
| 72125 chr11 manual_curation CDS 31248304 31248592 . - 2 Parent=GSCOCT00032029001 | |
| 72126 chr11 manual_curation gene 31253072 31255408 . - . ID=GSCOCG00032028001;Name=Cc11_g14660 | |
| 72127 chr11 manual_curation mRNA 31253072 31255408 . - . ID=GSCOCT00032028001;Parent=GSCOCG00032028001;Name=Cc11_g14660 | |
| 72128 chr11 manual_curation polypeptide 31253354 31255408 . - . ID=GSCOCP00032028001;Dbxref=InterPro:IPR010341,PFAM:PF06075,TAIR:AT1G08760.1,TAIR:AT1G23790.1,TAIR:AT1G70340.1,TrEMBL:B9HLV4,TrEMBL:B9SHB8,TrEMBL:F6HPP3;Derives_from=GSCOCT00032028001;Name=Cc11_g14660;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Plant protein of unknown function (DUF936),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032028001~ Plant protein of unknown function (DUF936)~ unknown_gene~ complete;original_location=join(87258..88046%2C88150..88329%2C88427..88518%2C88604..89312);owner=coffea | |
| 72129 chr11 manual_curation exon 31254620 31255408 . - . Parent=GSCOCT00032028001 | |
| 72130 chr11 manual_curation exon 31254337 31254516 . - . Parent=GSCOCT00032028001 | |
| 72131 chr11 manual_curation exon 31254148 31254239 . - . Parent=GSCOCT00032028001 | |
| 72132 chr11 manual_curation exon 31253072 31254062 . - . Parent=GSCOCT00032028001 | |
| 72133 chr11 manual_curation CDS 31254620 31255408 . - 0 Parent=GSCOCT00032028001 | |
| 72134 chr11 manual_curation CDS 31254337 31254516 . - 0 Parent=GSCOCT00032028001 | |
| 72135 chr11 manual_curation CDS 31254148 31254239 . - 0 Parent=GSCOCT00032028001 | |
| 72136 chr11 manual_curation CDS 31253354 31254062 . - 2 Parent=GSCOCT00032028001 | |
| 72137 chr11 manual_curation gene 31266462 31267840 . + . ID=GSCOCG00032026001;Name=Cc11_g14670 | |
| 72138 chr11 manual_curation mRNA 31266462 31267840 . + . ID=GSCOCT00032026001;Parent=GSCOCG00032026001;Name=Cc11_g14670 | |
| 72139 chr11 manual_curation polypeptide 31266462 31267714 . + . ID=GSCOCP00032026001;Dbxref=InterPro:IPR001092,InterPro:IPR011598,PROFILE:PS50888,SUPERFAMILY:SSF47459,TAIR:AT1G10585.1,TAIR:AT1G10586.1,TAIR:AT4G20970.1,TrEMBL:A5BA16,TrEMBL:A5BPE9,TrEMBL:A5C7N7;Derives_from=GSCOCT00032026001;Name=Cc11_g14670;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0030528,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative basic helix-loop-helix (bHLH) DNA-binding superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032026001~ Putative basic helix-loop-helix (bHLH) DNA-binding superfamily protein~ unknown_gene~ complete;original_location=complement(join(76085..76204%2C75672..75986%2C74952..75044));owner=coffea | |
| 72140 chr11 manual_curation exon 31267622 31267840 . + . Parent=GSCOCT00032026001 | |
| 72141 chr11 manual_curation exon 31266680 31266994 . + . Parent=GSCOCT00032026001 | |
| 72142 chr11 manual_curation exon 31266462 31266581 . + . Parent=GSCOCT00032026001 | |
| 72143 chr11 manual_curation CDS 31267622 31267714 . + 0 Parent=GSCOCT00032026001 | |
| 72144 chr11 manual_curation CDS 31266680 31266994 . + 0 Parent=GSCOCT00032026001 | |
| 72145 chr11 manual_curation CDS 31266462 31266581 . + 0 Parent=GSCOCT00032026001 | |
| 72146 chr11 manual_curation gene 31278737 31282113 . - . ID=GSCOCG00032024001;Name=Cc11_g14680 | |
| 72147 chr11 manual_curation mRNA 31278737 31282113 . - . ID=GSCOCT00032024001;Parent=GSCOCG00032024001;Name=Cc11_g14680 | |
| 72148 chr11 manual_curation polypeptide 31278737 31282113 . - . ID=GSCOCP00032024001;Dbxref=InterPro:IPR004873,PFAM:PF03181,PROFILE:PS51277,SwissProt:P93217,SwissProt:P93218,SwissProt:Q40161,TAIR:AT1G23760.1,TAIR:AT1G60390.1,TAIR:AT1G70370.1,TrEMBL:B9HLT5,TrEMBL:F6HHT6,TrEMBL:F6HHT8;Derives_from=GSCOCT00032024001;Name=Cc11_g14680;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Polygalacturonase-1 non-catalytic subunit beta,CC_functional_completeness:complete,CC_gene:GP1,CC_gene:GP2,CC_gene:GP3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032024001~ Polygalacturonase-1 non-catalytic subunit beta~ GP1~ complete;original_location=join(60553..60780%2C60837..60858%2C60939..61649%2C61843..61918%2C62391..62412%2C62575..62794%2C63268..63296%2C63519..63929);owner=coffea | |
| 72149 chr11 manual_curation exon 31281886 31282113 . - . Parent=GSCOCT00032024001 | |
| 72150 chr11 manual_curation exon 31281808 31281829 . - . Parent=GSCOCT00032024001 | |
| 72151 chr11 manual_curation exon 31281017 31281727 . - . Parent=GSCOCT00032024001 | |
| 72152 chr11 manual_curation exon 31280748 31280823 . - . Parent=GSCOCT00032024001 | |
| 72153 chr11 manual_curation exon 31280254 31280275 . - . Parent=GSCOCT00032024001 | |
| 72154 chr11 manual_curation exon 31279872 31280091 . - . Parent=GSCOCT00032024001 | |
| 72155 chr11 manual_curation exon 31279370 31279398 . - . Parent=GSCOCT00032024001 | |
| 72156 chr11 manual_curation exon 31278737 31279147 . - . Parent=GSCOCT00032024001 | |
| 72157 chr11 manual_curation CDS 31281886 31282113 . - 0 Parent=GSCOCT00032024001 | |
| 72158 chr11 manual_curation CDS 31281808 31281829 . - 0 Parent=GSCOCT00032024001 | |
| 72159 chr11 manual_curation CDS 31281017 31281727 . - 1 Parent=GSCOCT00032024001 | |
| 72160 chr11 manual_curation CDS 31280748 31280823 . - 1 Parent=GSCOCT00032024001 | |
| 72161 chr11 manual_curation CDS 31280254 31280275 . - 2 Parent=GSCOCT00032024001 | |
| 72162 chr11 manual_curation CDS 31279872 31280091 . - 0 Parent=GSCOCT00032024001 | |
| 72163 chr11 manual_curation CDS 31279370 31279398 . - 1 Parent=GSCOCT00032024001 | |
| 72164 chr11 manual_curation CDS 31278737 31279147 . - 0 Parent=GSCOCT00032024001 | |
| 72165 chr11 manual_curation gene 31289199 31293040 . - . ID=GSCOCG00032023001;Name=Cc11_g14690 | |
| 72166 chr11 manual_curation mRNA 31289199 31293040 . - . ID=GSCOCT00032023001;Parent=GSCOCG00032023001;Name=Cc11_g14690 | |
| 72167 chr11 manual_curation polypeptide 31290789 31292918 . - . ID=GSCOCP00032023001;Dbxref=InterPro:IPR004873,PFAM:PF03181,PROFILE:PS51277,SwissProt:P93217,SwissProt:P93218,SwissProt:Q40161,TAIR:AT1G23760.1,TAIR:AT1G60390.1,TAIR:AT1G70370.1,TrEMBL:B9HLT5,TrEMBL:B9HU70,TrEMBL:F6HHT6;Derives_from=GSCOCT00032023001;Name=Cc11_g14690;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Polygalacturonase-1 non-catalytic subunit beta,CC_functional_completeness:complete,CC_gene:GP1,CC_gene:GP2,CC_gene:GP3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032023001~ Polygalacturonase-1 non-catalytic subunit beta~ GP1~ complete;original_location=join(49748..49822%2C50021..51508%2C51545..51877);owner=coffea | |
| 72168 chr11 manual_curation exon 31292844 31293040 . - . Parent=GSCOCT00032023001 | |
| 72169 chr11 manual_curation exon 31291158 31292645 . - . Parent=GSCOCT00032023001 | |
| 72170 chr11 manual_curation exon 31289199 31291121 . - . Parent=GSCOCT00032023001 | |
| 72171 chr11 manual_curation CDS 31292844 31292918 . - 0 Parent=GSCOCT00032023001 | |
| 72172 chr11 manual_curation CDS 31291158 31292645 . - 0 Parent=GSCOCT00032023001 | |
| 72173 chr11 manual_curation CDS 31290789 31291121 . - 0 Parent=GSCOCT00032023001 | |
| 72174 chr11 manual_curation gene 31305261 31308373 . - . ID=GSCOCG00032022001;Name=Cc11_g14700 | |
| 72175 chr11 manual_curation mRNA 31305261 31308373 . - . ID=GSCOCT00032022001;Parent=GSCOCG00032022001;Name=Cc11_g14700 | |
| 72176 chr11 manual_curation polypeptide 31305570 31307512 . - . ID=GSCOCP00032022001;Dbxref=GENE3D:G3DSA:2.40.50.140,InterPro:IPR012340,InterPro:IPR016027,SUPERFAMILY:SSF50249,SwissProt:O49453,TAIR:AT1G23750.1,TAIR:AT2G33845.1,TAIR:AT4G28440.1,TrEMBL:B7FKB1,TrEMBL:F6HUZ8,TrEMBL:Q45NM5;Derives_from=GSCOCT00032022001;Name=Cc11_g14700;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterized protein At4g28440,CC_functional_completeness:fragment,CC_gene:At4g28440;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032022001~ Uncharacterized protein At4g28440~ At4g28440~ fragment;original_location=join(35154..35184%2C36906..37096);owner=coffea | |
| 72177 chr11 manual_curation exon 31308214 31308373 . - . Parent=GSCOCT00032022001 | |
| 72178 chr11 manual_curation exon 31307482 31307688 . - . Parent=GSCOCT00032022001 | |
| 72179 chr11 manual_curation exon 31305261 31305760 . - . Parent=GSCOCT00032022001 | |
| 72180 chr11 manual_curation CDS 31307482 31307512 . - 0 Parent=GSCOCT00032022001 | |
| 72181 chr11 manual_curation CDS 31305570 31305760 . - 1 Parent=GSCOCT00032022001 | |
| 72182 chr11 manual_curation gene 31309654 31310274 . + . ID=GSCOCG00032021001;Name=Cc11_g14710 | |
| 72183 chr11 manual_curation mRNA 31309654 31310274 . + . ID=GSCOCT00032021001;Parent=GSCOCG00032021001;Name=Cc11_g14710 | |
| 72184 chr11 manual_curation polypeptide 31309991 31310274 . + . ID=GSCOCP00032021001;Derives_from=GSCOCT00032021001;Name=Cc11_g14710;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032021001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(32619..32675%2C32392..32508));owner=coffea | |
| 72185 chr11 manual_curation exon 31309654 31309742 . + . Parent=GSCOCT00032021001 | |
| 72186 chr11 manual_curation exon 31310158 31310274 . + . Parent=GSCOCT00032021001 | |
| 72187 chr11 manual_curation exon 31309975 31310047 . + . Parent=GSCOCT00032021001 | |
| 72188 chr11 manual_curation CDS 31310158 31310274 . + 0 Parent=GSCOCT00032021001 | |
| 72189 chr11 manual_curation CDS 31309991 31310047 . + 0 Parent=GSCOCT00032021001 | |
| 72190 chr11 manual_curation gene 31311918 31316569 . + . ID=GSCOCG00032019001;Name=Cc11_g14720 | |
| 72191 chr11 manual_curation mRNA 31311918 31316569 . + . ID=GSCOCT00032019001;Parent=GSCOCG00032019001;Name=Cc11_g14720 | |
| 72192 chr11 manual_curation polypeptide 31312582 31316425 . + . ID=GSCOCP00032019001;Dbxref=GENE3D:G3DSA:3.40.1050.10,InterPro:IPR001765,InterPro:IPR015892,PANTHER:PTHR11002,PFAM:PF00484,PROSITE:PS00704,PROSITE:PS00705,SUPERFAMILY:SSF53056,SwissProt:P27140,SwissProt:P27141,SwissProt:P42737,TAIR:AT1G23730.1,TAIR:AT3G01500.2,TAIR:AT5G14740.1,TrEMBL:B9SHA8,TrEMBL:D7TDF1,TrEMBL:Q5NE21;Derives_from=GSCOCT00032019001;Name=Cc11_g14720;Ontology_term=CC_evidence_code:ISS,GO:0004089,GO:0008270,GO:0015976,CC_EC_number:4.2.1.1,PRODUCT:Carbonic anhydrase%2C chloroplastic,CC_functional_completeness:complete,CC_gene:CA2,CC_gene:CA1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032019001~ Carbonic anhydrase%2C chloroplastic~ CA2~ complete;original_location=complement(join(30032..30084%2C29404..29544%2C28253..28301%2C27981..28097%2C27519..27572%2C26909..26994%2C26597..26702%2C26241..26405));owner=coffea | |
| 72193 chr11 manual_curation exon 31311918 31312098 . + . Parent=GSCOCT00032019001 | |
| 72194 chr11 manual_curation exon 31316261 31316569 . + . Parent=GSCOCT00032019001 | |
| 72195 chr11 manual_curation exon 31315964 31316069 . + . Parent=GSCOCT00032019001 | |
| 72196 chr11 manual_curation exon 31315672 31315757 . + . Parent=GSCOCT00032019001 | |
| 72197 chr11 manual_curation exon 31315094 31315147 . + . Parent=GSCOCT00032019001 | |
| 72198 chr11 manual_curation exon 31314569 31314685 . + . Parent=GSCOCT00032019001 | |
| 72199 chr11 manual_curation exon 31314365 31314413 . + . Parent=GSCOCT00032019001 | |
| 72200 chr11 manual_curation exon 31313122 31313262 . + . Parent=GSCOCT00032019001 | |
| 72201 chr11 manual_curation exon 31312573 31312634 . + . Parent=GSCOCT00032019001 | |
| 72202 chr11 manual_curation CDS 31316261 31316425 . + 0 Parent=GSCOCT00032019001 | |
| 72203 chr11 manual_curation CDS 31315964 31316069 . + 2 Parent=GSCOCT00032019001 | |
| 72204 chr11 manual_curation CDS 31315672 31315757 . + 0 Parent=GSCOCT00032019001 | |
| 72205 chr11 manual_curation CDS 31315094 31315147 . + 0 Parent=GSCOCT00032019001 | |
| 72206 chr11 manual_curation CDS 31314569 31314685 . + 0 Parent=GSCOCT00032019001 | |
| 72207 chr11 manual_curation CDS 31314365 31314413 . + 2 Parent=GSCOCT00032019001 | |
| 72208 chr11 manual_curation CDS 31313122 31313262 . + 2 Parent=GSCOCT00032019001 | |
| 72209 chr11 manual_curation CDS 31312582 31312634 . + 0 Parent=GSCOCT00032019001 | |
| 72210 chr11 manual_curation gene 31319086 31322730 . - . ID=GSCOCG00032018001;Name=Cc11_g14730 | |
| 72211 chr11 manual_curation mRNA 31319086 31322730 . - . ID=GSCOCT00032018001;Parent=GSCOCG00032018001;Name=Cc11_g14730 | |
| 72212 chr11 manual_curation polypeptide 31319639 31322649 . - . ID=GSCOCP00032018001;Dbxref=InterPro:IPR002085,InterPro:IPR002364,InterPro:IPR011032,InterPro:IPR013149,InterPro:IPR013154,InterPro:IPR020843,PANTHER:PTHR11695,PFAM:PF00107,PFAM:PF08240,PROSITE:PS01162,SMART:SM00829,SUPERFAMILY:SSF50129,SwissProt:Q0VC50,SwissProt:Q8WWV3,SwissProt:Q9ZUC1,TAIR:AT1G23740.1,TAIR:AT3G15090.1,TAIR:AT4G13010.1,TrEMBL:B9SHB0,TrEMBL:E2S0A5,TrEMBL:E5GBJ6;Derives_from=GSCOCT00032018001;Name=Cc11_g14730;Ontology_term=CC_evidence_code:ISS,GO:0008270,GO:0016491,GO:0055114,CC_EC_number:1.6.5.5,PRODUCT:Quinone oxidoreductase-like protein At1g23740%2C chloroplastic,CC_functional_completeness:complete,CC_gene:At1g23740,CC_gene:RTN4IP1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032018001~ Quinone oxidoreductase-like protein At1g23740%2C chloroplastic~ At1g23740~ complete;original_location=join(20017..20448%2C21132..21455%2C21934..22093%2C22762..23027);owner=coffea | |
| 72213 chr11 manual_curation exon 31322218 31322730 . - . Parent=GSCOCT00032018001 | |
| 72214 chr11 manual_curation exon 31321211 31321534 . - . Parent=GSCOCT00032018001 | |
| 72215 chr11 manual_curation exon 31320573 31320732 . - . Parent=GSCOCT00032018001 | |
| 72216 chr11 manual_curation exon 31319086 31319904 . - . Parent=GSCOCT00032018001 | |
| 72217 chr11 manual_curation CDS 31322218 31322649 . - 0 Parent=GSCOCT00032018001 | |
| 72218 chr11 manual_curation CDS 31321211 31321534 . - 0 Parent=GSCOCT00032018001 | |
| 72219 chr11 manual_curation CDS 31320573 31320732 . - 0 Parent=GSCOCT00032018001 | |
| 72220 chr11 manual_curation CDS 31319639 31319904 . - 1 Parent=GSCOCT00032018001 | |
| 72221 chr11 manual_curation gene 31323241 31326442 . - . ID=GSCOCG00032017001;Name=Cc11_g14740 | |
| 72222 chr11 manual_curation mRNA 31323241 31326442 . - . ID=GSCOCT00032017001;Parent=GSCOCG00032017001;Name=Cc11_g14740 | |
| 72223 chr11 manual_curation polypeptide 31323462 31325234 . - . ID=GSCOCP00032017001;Dbxref=InterPro:IPR003863,PFAM:PF02713,TAIR:AT1G23560.1,TAIR:AT1G23600.1,TAIR:AT1G70480.2,TrEMBL:B9HU63,TrEMBL:B9SH98,TrEMBL:D7TDH1;Derives_from=GSCOCT00032017001;Name=Cc11_g14740;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Domain of unknown function (DUF220),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032017001~ Domain of unknown function (DUF220)~ unknown_gene~ complete;original_location=join(17432..17497%2C17589..17750%2C17966..18088%2C18235..18378%2C18758..19204);owner=coffea | |
| 72224 chr11 manual_curation exon 31325169 31326442 . - . Parent=GSCOCT00032017001 | |
| 72225 chr11 manual_curation exon 31324916 31325077 . - . Parent=GSCOCT00032017001 | |
| 72226 chr11 manual_curation exon 31324578 31324700 . - . Parent=GSCOCT00032017001 | |
| 72227 chr11 manual_curation exon 31324288 31324431 . - . Parent=GSCOCT00032017001 | |
| 72228 chr11 manual_curation exon 31323241 31323908 . - . Parent=GSCOCT00032017001 | |
| 72229 chr11 manual_curation CDS 31325169 31325234 . - 0 Parent=GSCOCT00032017001 | |
| 72230 chr11 manual_curation CDS 31324916 31325077 . - 0 Parent=GSCOCT00032017001 | |
| 72231 chr11 manual_curation CDS 31324578 31324700 . - 0 Parent=GSCOCT00032017001 | |
| 72232 chr11 manual_curation CDS 31324288 31324431 . - 0 Parent=GSCOCT00032017001 | |
| 72233 chr11 manual_curation CDS 31323462 31323908 . - 0 Parent=GSCOCT00032017001 | |
| 72234 chr11 manual_curation gene 31335876 31337289 . + . ID=GSCOCG00032014001;Name=Cc11_g14750 | |
| 72235 chr11 manual_curation mRNA 31335876 31337289 . + . ID=GSCOCT00032014001;Parent=GSCOCG00032014001;Name=Cc11_g14750 | |
| 72236 chr11 manual_curation polypeptide 31335876 31337040 . + . ID=GSCOCP00032014001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR000490,InterPro:IPR013781,InterPro:IPR017853,PFAM:PF00332,PROSITE:PS00587,SUPERFAMILY:SSF51445,SwissProt:P23432,SwissProt:P52407,SwissProt:Q9FJU9,TAIR:AT2G05790.1,TAIR:AT4G16260.1,TAIR:AT4G26830.1,TrEMBL:A5BKQ6,TrEMBL:G0XSW5,TrEMBL:Q42944;Derives_from=GSCOCT00032014001;Name=Cc11_g14750;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0043169,CC_EC_number:3.2.1.39,PRODUCT:Putative Glucan endo-1%2C3-beta-glucosidase 13,CC_functional_completeness:fragment,CC_gene:At5g56590,CC_gene:SP41A,CC_gene:HGN1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032014001~ Putative Glucan endo-1%2C3-beta-glucosidase 13~ At5g56590~ fragment;original_location=complement(join(6712..6790%2C5626..6587));owner=coffea | |
| 72237 chr11 manual_curation exon 31336079 31337289 . + . Parent=GSCOCT00032014001 | |
| 72238 chr11 manual_curation exon 31335876 31335954 . + . Parent=GSCOCT00032014001 | |
| 72239 chr11 manual_curation CDS 31336079 31337040 . + 1 Parent=GSCOCT00032014001 | |
| 72240 chr11 manual_curation CDS 31335876 31335954 . + 0 Parent=GSCOCT00032014001 | |
| 72241 chr11 manual_curation gene 31338860 31342158 . + . ID=GSCOCG00032013001;Name=Cc11_g14760 | |
| 72242 chr11 manual_curation mRNA 31338860 31342158 . + . ID=GSCOCT00032013001;Parent=GSCOCG00032013001;Name=Cc11_g14760 | |
| 72243 chr11 manual_curation polypeptide 31339194 31341774 . + . ID=GSCOCP00032013001;Dbxref=GENE3D:G3DSA:3.40.30.10,InterPro:IPR000866,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR013740,InterPro:IPR017936,InterPro:IPR017937,PFAM:PF00578,PFAM:PF08534,PROFILE:PS51352,PROSITE:PS00194,SUPERFAMILY:SSF52833,SwissProt:O80763,SwissProt:Q7Y0E8,SwissProt:Q7Y0F2,TAIR:AT1G60420.1,TAIR:AT4G31240.1,TrEMBL:A5BVL7,TrEMBL:B9SHA0,TrEMBL:F6HHU9;Derives_from=GSCOCT00032013001;Name=Cc11_g14760;Ontology_term=CC_evidence_code:ISS,GO:0016209,GO:0016491,GO:0045454,CC_EC_number:missing_EC_number,PRODUCT:Probable nucleoredoxin 1,CC_functional_completeness:complete,CC_gene:At1g60420,CC_gene:Os03g0405500,CC_gene:Os03g0405900;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00032013001~ Probable nucleoredoxin 1~ At1g60420~ complete;original_location=complement(join(3380..3472%2C2384..2863%2C1813..2292%2C1141..1566%2C892..1062));owner=coffea | |
| 72244 chr11 manual_curation exon 31341604 31342158 . + . Parent=GSCOCT00032013001 | |
| 72245 chr11 manual_curation exon 31341100 31341525 . + . Parent=GSCOCT00032013001 | |
| 72246 chr11 manual_curation exon 31340374 31340853 . + . Parent=GSCOCT00032013001 | |
| 72247 chr11 manual_curation exon 31339803 31340282 . + . Parent=GSCOCT00032013001 | |
| 72248 chr11 manual_curation exon 31338860 31339286 . + . Parent=GSCOCT00032013001 | |
| 72249 chr11 manual_curation CDS 31341604 31341774 . + 0 Parent=GSCOCT00032013001 | |
| 72250 chr11 manual_curation CDS 31341100 31341525 . + 0 Parent=GSCOCT00032013001 | |
| 72251 chr11 manual_curation CDS 31340374 31340853 . + 0 Parent=GSCOCT00032013001 | |
| 72252 chr11 manual_curation CDS 31339803 31340282 . + 0 Parent=GSCOCT00032013001 | |
| 72253 chr11 manual_curation CDS 31339194 31339286 . + 0 Parent=GSCOCT00032013001 | |
| 72254 chr11 manual_curation gene 31353089 31355816 . + . ID=GSCOCG00006547001;Name=Cc11_g14770 | |
| 72255 chr11 manual_curation mRNA 31353089 31355816 . + . ID=GSCOCT00006547001;Parent=GSCOCG00006547001;Name=Cc11_g14770 | |
| 72256 chr11 manual_curation polypeptide 31353089 31355694 . + . ID=GSCOCP00006547001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:O65468,SwissProt:Q8GYA4,SwissProt:Q9LDQ3,TAIR:AT4G11530.1,TAIR:AT4G23160.1,TAIR:AT4G23180.1,TrEMBL:B9H1S4,TrEMBL:B9HZN4,TrEMBL:B9P5I8;Derives_from=GSCOCT00006547001;Name=Cc11_g14770;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Cysteine-rich receptor-like protein kinase 10,CC_functional_completeness:fragment,CC_gene:CRK10,CC_gene:CRK35,CC_gene:CRK8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00006547001~ Cysteine-rich receptor-like protein kinase 10~ CRK10~ fragment;original_location=join(10324..10379%2C10486..10613%2C10703..10821%2C10914..11124%2C11651..11888%2C12015..12165%2C12585..12929);owner=coffea | |
| 72257 chr11 manual_curation exon 31353089 31353144 . + . Parent=GSCOCT00006547001 | |
| 72258 chr11 manual_curation exon 31353251 31353378 . + . Parent=GSCOCT00006547001 | |
| 72259 chr11 manual_curation exon 31353468 31353586 . + . Parent=GSCOCT00006547001 | |
| 72260 chr11 manual_curation exon 31353679 31353889 . + . Parent=GSCOCT00006547001 | |
| 72261 chr11 manual_curation exon 31354416 31354653 . + . Parent=GSCOCT00006547001 | |
| 72262 chr11 manual_curation exon 31354780 31354930 . + . Parent=GSCOCT00006547001 | |
| 72263 chr11 manual_curation exon 31355350 31355816 . + . Parent=GSCOCT00006547001 | |
| 72264 chr11 manual_curation CDS 31353089 31353144 . + 0 Parent=GSCOCT00006547001 | |
| 72265 chr11 manual_curation CDS 31353251 31353378 . + 2 Parent=GSCOCT00006547001 | |
| 72266 chr11 manual_curation CDS 31353468 31353586 . + 1 Parent=GSCOCT00006547001 | |
| 72267 chr11 manual_curation CDS 31353679 31353889 . + 0 Parent=GSCOCT00006547001 | |
| 72268 chr11 manual_curation CDS 31354416 31354653 . + 1 Parent=GSCOCT00006547001 | |
| 72269 chr11 manual_curation CDS 31354780 31354930 . + 2 Parent=GSCOCT00006547001 | |
| 72270 chr11 manual_curation CDS 31355350 31355694 . + 0 Parent=GSCOCT00006547001 | |
| 72271 chr11 manual_curation gene 31404708 31410943 . + . ID=GSCOCG00006550001;Name=Cc11_g14780 | |
| 72272 chr11 manual_curation mRNA 31404708 31410943 . + . ID=GSCOCT00006550001;Parent=GSCOCG00006550001;Name=Cc11_g14780 | |
| 72273 chr11 manual_curation polypeptide 31404708 31410943 . + . ID=GSCOCP00006550001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR002290,InterPro:IPR002902,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR020635,PFAM:PF01657,PFAM:PF07714,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:O65468,SwissProt:Q8GYA4,SwissProt:Q9M0X5,TAIR:AT4G05200.1,TAIR:AT4G23160.1,TAIR:AT4G23180.1,TrEMBL:B9HZN4,TrEMBL:B9RXT5,TrEMBL:F6HJ09;Derives_from=GSCOCT00006550001;Name=Cc11_g14780;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Cysteine-rich receptor-like protein kinase 25,CC_functional_completeness:fragment,CC_gene:CRK25,CC_gene:CRK10,CC_gene:CRK8;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00006550001~ Putative Cysteine-rich receptor-like protein kinase 25~ CRK25~ fragment;original_location=join(61943..62869%2C65157..65163%2C66752..66870%2C66958..67168%2C67674..67911%2C68046..68178);owner=coffea | |
| 72274 chr11 manual_curation exon 31404708 31405634 . + . Parent=GSCOCT00006550001 | |
| 72275 chr11 manual_curation exon 31407922 31407928 . + . Parent=GSCOCT00006550001 | |
| 72276 chr11 manual_curation exon 31409517 31409635 . + . Parent=GSCOCT00006550001 | |
| 72277 chr11 manual_curation exon 31409723 31409933 . + . Parent=GSCOCT00006550001 | |
| 72278 chr11 manual_curation exon 31410439 31410676 . + . Parent=GSCOCT00006550001 | |
| 72279 chr11 manual_curation exon 31410811 31410943 . + . Parent=GSCOCT00006550001 | |
| 72280 chr11 manual_curation CDS 31404708 31405634 . + 0 Parent=GSCOCT00006550001 | |
| 72281 chr11 manual_curation CDS 31407922 31407928 . + 0 Parent=GSCOCT00006550001 | |
| 72282 chr11 manual_curation CDS 31409517 31409635 . + 1 Parent=GSCOCT00006550001 | |
| 72283 chr11 manual_curation CDS 31409723 31409933 . + 0 Parent=GSCOCT00006550001 | |
| 72284 chr11 manual_curation CDS 31410439 31410676 . + 1 Parent=GSCOCT00006550001 | |
| 72285 chr11 manual_curation CDS 31410811 31410943 . + 2 Parent=GSCOCT00006550001 | |
| 72286 chr11 manual_curation gene 31411418 31413664 . + . ID=GSCOCG00006551001;Name=Cc11_g14790 | |
| 72287 chr11 manual_curation mRNA 31411418 31413664 . + . ID=GSCOCT00006551001;Parent=GSCOCG00006551001;Name=Cc11_g14790 | |
| 72288 chr11 manual_curation polypeptide 31411418 31413664 . + . ID=GSCOCP00006551001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q8GYA4,SwissProt:Q9LDQ3,SwissProt:Q9ZP16,TAIR:AT4G11530.1,TAIR:AT4G23180.1,TAIR:AT4G23190.1,TrEMBL:C6ZRN5,TrEMBL:F6HJ09,TrEMBL:I1JAW6;Derives_from=GSCOCT00006551001;Name=Cc11_g14790;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.10.2,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:CRK10,CC_gene:CRK11,CC_gene:CRK35;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00006551001~ Putative uncharacterized protein~ CRK10~ fragment;original_location=join(68653..68705%2C68838..68882%2C69419..69642%2C69736..69854%2C69942..70152%2C70658..70899);owner=coffea | |
| 72289 chr11 manual_curation exon 31411418 31411470 . + . Parent=GSCOCT00006551001 | |
| 72290 chr11 manual_curation exon 31411603 31411647 . + . Parent=GSCOCT00006551001 | |
| 72291 chr11 manual_curation exon 31412184 31412407 . + . Parent=GSCOCT00006551001 | |
| 72292 chr11 manual_curation exon 31412501 31412619 . + . Parent=GSCOCT00006551001 | |
| 72293 chr11 manual_curation exon 31412707 31412917 . + . Parent=GSCOCT00006551001 | |
| 72294 chr11 manual_curation exon 31413423 31413664 . + . Parent=GSCOCT00006551001 | |
| 72295 chr11 manual_curation CDS 31411418 31411470 . + 0 Parent=GSCOCT00006551001 | |
| 72296 chr11 manual_curation CDS 31411603 31411647 . + 2 Parent=GSCOCT00006551001 | |
| 72297 chr11 manual_curation CDS 31412184 31412407 . + 2 Parent=GSCOCT00006551001 | |
| 72298 chr11 manual_curation CDS 31412501 31412619 . + 1 Parent=GSCOCT00006551001 | |
| 72299 chr11 manual_curation CDS 31412707 31412917 . + 0 Parent=GSCOCT00006551001 | |
| 72300 chr11 manual_curation CDS 31413423 31413664 . + 1 Parent=GSCOCT00006551001 | |
| 72301 chr11 manual_curation gene 31445535 31449858 . + . ID=GSCOCG00001057001;Name=Cc11_g14800 | |
| 72302 chr11 manual_curation mRNA 31445535 31449858 . + . ID=GSCOCT00001057001;Parent=GSCOCG00001057001;Name=Cc11_g14800 | |
| 72303 chr11 manual_curation polypeptide 31445792 31449661 . + . ID=GSCOCP00001057001;Dbxref=TAIR:AT5G11680.1,TrEMBL:B9RG49,TrEMBL:E5KC15,TrEMBL:Q9LYG2;Derives_from=GSCOCT00001057001;Name=Cc11_g14800;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001057001~ FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cytosol%2C plasma membrane%3B EXPRESSED IN: 26 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: WW-domain-binding protein (InterPro:IPR018826)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(262088..262197%2C261009..261120%2C258792..258863%2C258511..258719%2C258328..258436));owner=coffea | |
| 72304 chr11 manual_curation exon 31449553 31449858 . + . Parent=GSCOCT00001057001 | |
| 72305 chr11 manual_curation exon 31449270 31449478 . + . Parent=GSCOCT00001057001 | |
| 72306 chr11 manual_curation exon 31449126 31449197 . + . Parent=GSCOCT00001057001 | |
| 72307 chr11 manual_curation exon 31446869 31446980 . + . Parent=GSCOCT00001057001 | |
| 72308 chr11 manual_curation exon 31445535 31445901 . + . Parent=GSCOCT00001057001 | |
| 72309 chr11 manual_curation CDS 31449553 31449661 . + 2 Parent=GSCOCT00001057001 | |
| 72310 chr11 manual_curation CDS 31449270 31449478 . + 0 Parent=GSCOCT00001057001 | |
| 72311 chr11 manual_curation CDS 31449126 31449197 . + 0 Parent=GSCOCT00001057001 | |
| 72312 chr11 manual_curation CDS 31446869 31446980 . + 2 Parent=GSCOCT00001057001 | |
| 72313 chr11 manual_curation CDS 31445792 31445901 . + 0 Parent=GSCOCT00001057001 | |
| 72314 chr11 manual_curation gene 31449913 31452257 . - . ID=GSCOCG00001056001;Name=Cc11_g14810 | |
| 72315 chr11 manual_curation mRNA 31449913 31452257 . - . ID=GSCOCT00001056001;Parent=GSCOCG00001056001;Name=Cc11_g14810 | |
| 72316 chr11 manual_curation polypeptide 31450075 31451652 . - . ID=GSCOCP00001056001;Dbxref=InterPro:IPR004263,PFAM:PF03016,SwissProt:Q3EAR7,SwissProt:Q9FFN2,SwissProt:Q9SSE8,TAIR:AT4G16745.2,TAIR:AT4G38040.1,TAIR:AT5G19670.1,TrEMBL:B9GMX9,TrEMBL:B9RG47,TrEMBL:D7TFN4;Derives_from=GSCOCT00001056001;Name=Cc11_g14810;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:2.4.1.225,PRODUCT:Putative Probable glycosyltransferase At5g03795,CC_functional_completeness:fragment,CC_gene:At3g07620,CC_gene:At5g03795,CC_gene:At3g42180;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001056001~ Putative Probable glycosyltransferase At5g03795~ At3g07620~ fragment;original_location=join(256337..256977%2C257431..257914);owner=coffea | |
| 72317 chr11 manual_curation exon 31451012 31452257 . - . Parent=GSCOCT00001056001 | |
| 72318 chr11 manual_curation exon 31449913 31450558 . - . Parent=GSCOCT00001056001 | |
| 72319 chr11 manual_curation CDS 31451012 31451652 . - 0 Parent=GSCOCT00001056001 | |
| 72320 chr11 manual_curation CDS 31450075 31450558 . - 2 Parent=GSCOCT00001056001 | |
| 72321 chr11 manual_curation gene 31457234 31467095 . + . ID=GSCOCG00001055001;Name=Cc11_g14820 | |
| 72322 chr11 manual_curation mRNA 31457234 31467095 . + . ID=GSCOCT00001055001;Parent=GSCOCG00001055001;Name=Cc11_g14820 | |
| 72323 chr11 manual_curation polypeptide 31457484 31466582 . + . ID=GSCOCP00001055001;Dbxref=InterPro:IPR010765,PFAM:PF07082,TAIR:AT3G43540.1,TAIR:AT5G47860.1,TrEMBL:B9RG46,TrEMBL:D7TFN3,TrEMBL:I1KWX4;Derives_from=GSCOCT00001055001;Name=Cc11_g14820;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF1350),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001055001~ Protein of unknown function (DUF1350)~ unknown_gene~ complete;original_location=complement(join(250261..250505%2C249911..249980%2C249235..249359%2C248733..248841%2C248588..248651%2C248448..248503%2C248267..248374%2C247013..247162%2C241850..242020%2C241407..241640));owner=coffea | |
| 72324 chr11 manual_curation exon 31466349 31467095 . + . Parent=GSCOCT00001055001 | |
| 72325 chr11 manual_curation exon 31465969 31466139 . + . Parent=GSCOCT00001055001 | |
| 72326 chr11 manual_curation exon 31460827 31460976 . + . Parent=GSCOCT00001055001 | |
| 72327 chr11 manual_curation exon 31459615 31459722 . + . Parent=GSCOCT00001055001 | |
| 72328 chr11 manual_curation exon 31459486 31459541 . + . Parent=GSCOCT00001055001 | |
| 72329 chr11 manual_curation exon 31459338 31459401 . + . Parent=GSCOCT00001055001 | |
| 72330 chr11 manual_curation exon 31459148 31459256 . + . Parent=GSCOCT00001055001 | |
| 72331 chr11 manual_curation exon 31458630 31458754 . + . Parent=GSCOCT00001055001 | |
| 72332 chr11 manual_curation exon 31458009 31458078 . + . Parent=GSCOCT00001055001 | |
| 72333 chr11 manual_curation exon 31457234 31457728 . + . Parent=GSCOCT00001055001 | |
| 72334 chr11 manual_curation CDS 31466349 31466582 . + 0 Parent=GSCOCT00001055001 | |
| 72335 chr11 manual_curation CDS 31465969 31466139 . + 0 Parent=GSCOCT00001055001 | |
| 72336 chr11 manual_curation CDS 31460827 31460976 . + 0 Parent=GSCOCT00001055001 | |
| 72337 chr11 manual_curation CDS 31459615 31459722 . + 0 Parent=GSCOCT00001055001 | |
| 72338 chr11 manual_curation CDS 31459486 31459541 . + 1 Parent=GSCOCT00001055001 | |
| 72339 chr11 manual_curation CDS 31459338 31459401 . + 0 Parent=GSCOCT00001055001 | |
| 72340 chr11 manual_curation CDS 31459148 31459256 . + 2 Parent=GSCOCT00001055001 | |
| 72341 chr11 manual_curation CDS 31458630 31458754 . + 0 Parent=GSCOCT00001055001 | |
| 72342 chr11 manual_curation CDS 31458009 31458078 . + 2 Parent=GSCOCT00001055001 | |
| 72343 chr11 manual_curation CDS 31457484 31457728 . + 0 Parent=GSCOCT00001055001 | |
| 72344 chr11 manual_curation gene 31467755 31471154 . - . ID=GSCOCG00001054001;Name=Cc11_g14830 | |
| 72345 chr11 manual_curation mRNA 31467755 31471154 . - . ID=GSCOCT00001054001;Parent=GSCOCG00001054001;Name=Cc11_g14830 | |
| 72346 chr11 manual_curation polypeptide 31468131 31470974 . - . ID=GSCOCP00001054001;Dbxref=TAIR:AT1G71310.2,TAIR:AT5G47870.1,TrEMBL:A9PGP3,TrEMBL:B9RG45,TrEMBL:D7MUU0;Derives_from=GSCOCT00001054001;Name=Cc11_g14830;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001054001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(237015..237484%2C237698..237735%2C238118..238209%2C239724..239858);owner=coffea | |
| 72347 chr11 manual_curation exon 31470505 31471154 . - . Parent=GSCOCT00001054001 | |
| 72348 chr11 manual_curation exon 31470254 31470291 . - . Parent=GSCOCT00001054001 | |
| 72349 chr11 manual_curation exon 31469780 31469871 . - . Parent=GSCOCT00001054001 | |
| 72350 chr11 manual_curation exon 31467755 31468265 . - . Parent=GSCOCT00001054001 | |
| 72351 chr11 manual_curation CDS 31470505 31470974 . - 0 Parent=GSCOCT00001054001 | |
| 72352 chr11 manual_curation CDS 31470254 31470291 . - 2 Parent=GSCOCT00001054001 | |
| 72353 chr11 manual_curation CDS 31469780 31469871 . - 1 Parent=GSCOCT00001054001 | |
| 72354 chr11 manual_curation CDS 31468131 31468265 . - 0 Parent=GSCOCT00001054001 | |
| 72355 chr11 manual_curation gene 31473224 31477968 . - . ID=GSCOCG00001053001;Name=Cc11_g14840 | |
| 72356 chr11 manual_curation mRNA 31473224 31477968 . - . ID=GSCOCT00001053001;Parent=GSCOCG00001053001;Name=Cc11_g14840 | |
| 72357 chr11 manual_curation polypeptide 31473535 31477624 . - . ID=GSCOCP00001053001;Dbxref=GENE3D:G3DSA:1.25.10.10,InterPro:IPR011989,InterPro:IPR013918,InterPro:IPR016024,PFAM:PF08609,SUPERFAMILY:SSF48371,SwissProt:A1DLW4,SwissProt:Q4P7F2,SwissProt:Q4WDH3,TAIR:AT3G09350.1,TAIR:AT3G51980.1,TAIR:AT5G02150.1,TrEMBL:B9GMX6,TrEMBL:B9RG44,TrEMBL:F6HJ96;Derives_from=GSCOCT00001053001;Name=Cc11_g14840;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:ARM repeat superfamily protein,CC_functional_completeness:complete,CC_gene:FES1,CC_gene:fes1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001053001~ ARM repeat superfamily protein~ FES1~ complete;original_location=join(230365..230626%2C231811..231902%2C232125..232275%2C233254..233381%2C233480..233638%2C233747..233932%2C234162..234365%2C234434..234454);owner=coffea | |
| 72358 chr11 manual_curation exon 31477363 31477968 . - . Parent=GSCOCT00001053001 | |
| 72359 chr11 manual_curation exon 31476087 31476178 . - . Parent=GSCOCT00001053001 | |
| 72360 chr11 manual_curation exon 31475714 31475864 . - . Parent=GSCOCT00001053001 | |
| 72361 chr11 manual_curation exon 31474608 31474735 . - . Parent=GSCOCT00001053001 | |
| 72362 chr11 manual_curation exon 31474351 31474509 . - . Parent=GSCOCT00001053001 | |
| 72363 chr11 manual_curation exon 31474057 31474242 . - . Parent=GSCOCT00001053001 | |
| 72364 chr11 manual_curation exon 31473624 31473827 . - . Parent=GSCOCT00001053001 | |
| 72365 chr11 manual_curation exon 31473224 31473555 . - . Parent=GSCOCT00001053001 | |
| 72366 chr11 manual_curation CDS 31477363 31477624 . - 0 Parent=GSCOCT00001053001 | |
| 72367 chr11 manual_curation CDS 31476087 31476178 . - 1 Parent=GSCOCT00001053001 | |
| 72368 chr11 manual_curation CDS 31475714 31475864 . - 0 Parent=GSCOCT00001053001 | |
| 72369 chr11 manual_curation CDS 31474608 31474735 . - 1 Parent=GSCOCT00001053001 | |
| 72370 chr11 manual_curation CDS 31474351 31474509 . - 0 Parent=GSCOCT00001053001 | |
| 72371 chr11 manual_curation CDS 31474057 31474242 . - 0 Parent=GSCOCT00001053001 | |
| 72372 chr11 manual_curation CDS 31473624 31473827 . - 0 Parent=GSCOCT00001053001 | |
| 72373 chr11 manual_curation CDS 31473535 31473555 . - 0 Parent=GSCOCT00001053001 | |
| 72374 chr11 manual_curation gene 31479320 31482193 . - . ID=GSCOCG00001052001;Name=Cc11_g14850 | |
| 72375 chr11 manual_curation mRNA 31479320 31482193 . - . ID=GSCOCT00001052001;Parent=GSCOCG00001052001;Name=Cc11_g14850 | |
| 72376 chr11 manual_curation polypeptide 31479643 31482081 . - . ID=GSCOCP00001052001;Dbxref=InterPro:IPR015414,PFAM:PF09335,SwissProt:Q55909,TAIR:AT1G44960.1,TrEMBL:B9GMW6,TrEMBL:B9RG32,TrEMBL:F6HJ85;Derives_from=GSCOCT00001052001;Name=Cc11_g14850;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative TVP38/TMEM64 family membrane protein slr0305,CC_functional_completeness:modules,CC_gene:slr0305;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001052001~ Putative TVP38/TMEM64 family membrane protein slr0305~ slr0305~ modules;original_location=join(225908..226230%2C227848..228346);owner=coffea | |
| 72377 chr11 manual_curation exon 31481759 31482193 . - . Parent=GSCOCT00001052001 | |
| 72378 chr11 manual_curation exon 31479320 31480141 . - . Parent=GSCOCT00001052001 | |
| 72379 chr11 manual_curation CDS 31481759 31482081 . - 0 Parent=GSCOCT00001052001 | |
| 72380 chr11 manual_curation CDS 31479643 31480141 . - 2 Parent=GSCOCT00001052001 | |
| 72381 chr11 manual_curation gene 31486561 31493632 . - . ID=GSCOCG00001051001;Name=Cc11_g14860 | |
| 72382 chr11 manual_curation mRNA 31486561 31493632 . - . ID=GSCOCT00001051001;Parent=GSCOCG00001051001;Name=Cc11_g14860 | |
| 72383 chr11 manual_curation polypeptide 31487308 31493513 . - . ID=GSCOCP00001051001;Dbxref=GENE3D:G3DSA:2.40.50.140,InterPro:IPR001208,InterPro:IPR008045,InterPro:IPR012340,InterPro:IPR016027,InterPro:IPR018525,InterPro:IPR021092,PFAM:PF00493,PFAM:PF12619,PRINTS:PR01657,PRINTS:PR01658,PROFILE:PS50051,PROSITE:PS00847,SMART:SM00350,SUPERFAMILY:SSF50249,SwissProt:P49736,SwissProt:P55861,SwissProt:Q6DIH3,TAIR:AT1G44900.1,TAIR:AT2G16440.1,TAIR:AT5G46280.1,TrEMBL:A7U953,TrEMBL:D7TFL2,TrEMBL:Q8H0G9;Derives_from=GSCOCT00001051001;Name=Cc11_g14860;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0005524,GO:0005634,GO:0006260,GO:0006270,CC_EC_number:missing_EC_number,PRODUCT:DNA replication licensing factor mcm2,CC_functional_completeness:complete,CC_gene:mcm2,CC_gene:MCM2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001051001~ DNA replication licensing factor mcm2~ mcm2~ complete;original_location=join(214476..214959%2C215509..215687%2C215786..215975%2C216128..216347%2C216439..216646%2C216806..216940%2C217042..217233%2C217554..217726%2C217801..217989%2C218064..218180%2C218837..218921%2C219012..219164%2C219260..219385%2C219487..219669%2C220281..220439%2C220565..220681);owner=coffea | |
| 72384 chr11 manual_curation exon 31493030 31493632 . - . Parent=GSCOCT00001051001 | |
| 72385 chr11 manual_curation exon 31492302 31492480 . - . Parent=GSCOCT00001051001 | |
| 72386 chr11 manual_curation exon 31492014 31492203 . - . Parent=GSCOCT00001051001 | |
| 72387 chr11 manual_curation exon 31491642 31491861 . - . Parent=GSCOCT00001051001 | |
| 72388 chr11 manual_curation exon 31491343 31491550 . - . Parent=GSCOCT00001051001 | |
| 72389 chr11 manual_curation exon 31491049 31491183 . - . Parent=GSCOCT00001051001 | |
| 72390 chr11 manual_curation exon 31490756 31490947 . - . Parent=GSCOCT00001051001 | |
| 72391 chr11 manual_curation exon 31490263 31490435 . - . Parent=GSCOCT00001051001 | |
| 72392 chr11 manual_curation exon 31490000 31490188 . - . Parent=GSCOCT00001051001 | |
| 72393 chr11 manual_curation exon 31489809 31489925 . - . Parent=GSCOCT00001051001 | |
| 72394 chr11 manual_curation exon 31489068 31489152 . - . Parent=GSCOCT00001051001 | |
| 72395 chr11 manual_curation exon 31488825 31488977 . - . Parent=GSCOCT00001051001 | |
| 72396 chr11 manual_curation exon 31488604 31488729 . - . Parent=GSCOCT00001051001 | |
| 72397 chr11 manual_curation exon 31488320 31488502 . - . Parent=GSCOCT00001051001 | |
| 72398 chr11 manual_curation exon 31487550 31487708 . - . Parent=GSCOCT00001051001 | |
| 72399 chr11 manual_curation exon 31486561 31487424 . - . Parent=GSCOCT00001051001 | |
| 72400 chr11 manual_curation CDS 31493030 31493513 . - 0 Parent=GSCOCT00001051001 | |
| 72401 chr11 manual_curation CDS 31492302 31492480 . - 1 Parent=GSCOCT00001051001 | |
| 72402 chr11 manual_curation CDS 31492014 31492203 . - 0 Parent=GSCOCT00001051001 | |
| 72403 chr11 manual_curation CDS 31491642 31491861 . - 1 Parent=GSCOCT00001051001 | |
| 72404 chr11 manual_curation CDS 31491343 31491550 . - 2 Parent=GSCOCT00001051001 | |
| 72405 chr11 manual_curation CDS 31491049 31491183 . - 0 Parent=GSCOCT00001051001 | |
| 72406 chr11 manual_curation CDS 31490756 31490947 . - 0 Parent=GSCOCT00001051001 | |
| 72407 chr11 manual_curation CDS 31490263 31490435 . - 0 Parent=GSCOCT00001051001 | |
| 72408 chr11 manual_curation CDS 31490000 31490188 . - 2 Parent=GSCOCT00001051001 | |
| 72409 chr11 manual_curation CDS 31489809 31489925 . - 2 Parent=GSCOCT00001051001 | |
| 72410 chr11 manual_curation CDS 31489068 31489152 . - 2 Parent=GSCOCT00001051001 | |
| 72411 chr11 manual_curation CDS 31488825 31488977 . - 0 Parent=GSCOCT00001051001 | |
| 72412 chr11 manual_curation CDS 31488604 31488729 . - 0 Parent=GSCOCT00001051001 | |
| 72413 chr11 manual_curation CDS 31488320 31488502 . - 0 Parent=GSCOCT00001051001 | |
| 72414 chr11 manual_curation CDS 31487550 31487708 . - 0 Parent=GSCOCT00001051001 | |
| 72415 chr11 manual_curation CDS 31487308 31487424 . - 0 Parent=GSCOCT00001051001 | |
| 72416 chr11 manual_curation gene 31504570 31504938 . + . ID=GSCOCG00001048001;Name=Cc11_g14870 | |
| 72417 chr11 manual_curation mRNA 31504570 31504938 . + . ID=GSCOCT00001048001;Parent=GSCOCG00001048001;Name=Cc11_g14870 | |
| 72418 chr11 manual_curation polypeptide 31504612 31504938 . + . ID=GSCOCP00001048001;Derives_from=GSCOCT00001048001;Name=Cc11_g14870;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001048001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(203295..203377%2C203051..203117));owner=coffea | |
| 72419 chr11 manual_curation exon 31504872 31504938 . + . Parent=GSCOCT00001048001 | |
| 72420 chr11 manual_curation exon 31504570 31504694 . + . Parent=GSCOCT00001048001 | |
| 72421 chr11 manual_curation CDS 31504872 31504938 . + 2 Parent=GSCOCT00001048001 | |
| 72422 chr11 manual_curation CDS 31504612 31504694 . + 0 Parent=GSCOCT00001048001 | |
| 72423 chr11 manual_curation gene 31505009 31513894 . + . ID=GSCOCG00001047001;Name=Cc11_g14880 | |
| 72424 chr11 manual_curation mRNA 31505009 31513894 . + . ID=GSCOCT00001047001;Parent=GSCOCG00001047001;Name=Cc11_g14880 | |
| 72425 chr11 manual_curation polypeptide 31505236 31513499 . + . ID=GSCOCP00001047001;Dbxref=GENE3D:G3DSA:1.10.472.10,InterPro:IPR002719,InterPro:IPR002720,InterPro:IPR006670,InterPro:IPR011028,InterPro:IPR013763,PFAM:PF01857,PFAM:PF01858,SMART:SM00385,SUPERFAMILY:SSF47954,SwissProt:B9GLX8,SwissProt:B9SVG9,SwissProt:Q66WV0,TAIR:AT3G12280.1,TrEMBL:G9I708,TrEMBL:H9E8V1,TrEMBL:Q9M7J0;Derives_from=GSCOCT00001047001;Name=Cc11_g14880;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Retinoblastoma-related protein,CC_functional_completeness:complete,CC_gene:RBR,CC_gene:RBL901,CC_gene:RBR1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001047001~ Retinoblastoma-related protein~ RBR~ complete;original_location=complement(join(202616..202753%2C202226..202333%2C201966..202111%2C201749..201845%2C201540..201586%2C200178..200373%2C199863..199929%2C199564..199740%2C199274..199467%2C198305..199172%2C197882..198050%2C197706..197778%2C197015..197191%2C196814..196933%2C196592..196736%2C196349..196461%2C194729..194844%2C194490..194637));owner=coffea | |
| 72426 chr11 manual_curation exon 31513352 31513894 . + . Parent=GSCOCT00001047001 | |
| 72427 chr11 manual_curation exon 31513145 31513260 . + . Parent=GSCOCT00001047001 | |
| 72428 chr11 manual_curation exon 31511528 31511640 . + . Parent=GSCOCT00001047001 | |
| 72429 chr11 manual_curation exon 31511253 31511397 . + . Parent=GSCOCT00001047001 | |
| 72430 chr11 manual_curation exon 31511056 31511175 . + . Parent=GSCOCT00001047001 | |
| 72431 chr11 manual_curation exon 31510798 31510974 . + . Parent=GSCOCT00001047001 | |
| 72432 chr11 manual_curation exon 31510211 31510283 . + . Parent=GSCOCT00001047001 | |
| 72433 chr11 manual_curation exon 31509939 31510107 . + . Parent=GSCOCT00001047001 | |
| 72434 chr11 manual_curation exon 31508817 31509684 . + . Parent=GSCOCT00001047001 | |
| 72435 chr11 manual_curation exon 31508522 31508715 . + . Parent=GSCOCT00001047001 | |
| 72436 chr11 manual_curation exon 31508249 31508425 . + . Parent=GSCOCT00001047001 | |
| 72437 chr11 manual_curation exon 31508060 31508126 . + . Parent=GSCOCT00001047001 | |
| 72438 chr11 manual_curation exon 31507616 31507811 . + . Parent=GSCOCT00001047001 | |
| 72439 chr11 manual_curation exon 31506403 31506449 . + . Parent=GSCOCT00001047001 | |
| 72440 chr11 manual_curation exon 31506144 31506240 . + . Parent=GSCOCT00001047001 | |
| 72441 chr11 manual_curation exon 31505878 31506023 . + . Parent=GSCOCT00001047001 | |
| 72442 chr11 manual_curation exon 31505656 31505763 . + . Parent=GSCOCT00001047001 | |
| 72443 chr11 manual_curation exon 31505009 31505373 . + . Parent=GSCOCT00001047001 | |
| 72444 chr11 manual_curation CDS 31513352 31513499 . + 2 Parent=GSCOCT00001047001 | |
| 72445 chr11 manual_curation CDS 31513145 31513260 . + 0 Parent=GSCOCT00001047001 | |
| 72446 chr11 manual_curation CDS 31511528 31511640 . + 1 Parent=GSCOCT00001047001 | |
| 72447 chr11 manual_curation CDS 31511253 31511397 . + 0 Parent=GSCOCT00001047001 | |
| 72448 chr11 manual_curation CDS 31511056 31511175 . + 0 Parent=GSCOCT00001047001 | |
| 72449 chr11 manual_curation CDS 31510798 31510974 . + 0 Parent=GSCOCT00001047001 | |
| 72450 chr11 manual_curation CDS 31510211 31510283 . + 2 Parent=GSCOCT00001047001 | |
| 72451 chr11 manual_curation CDS 31509939 31510107 . + 1 Parent=GSCOCT00001047001 | |
| 72452 chr11 manual_curation CDS 31508817 31509684 . + 0 Parent=GSCOCT00001047001 | |
| 72453 chr11 manual_curation CDS 31508522 31508715 . + 1 Parent=GSCOCT00001047001 | |
| 72454 chr11 manual_curation CDS 31508249 31508425 . + 1 Parent=GSCOCT00001047001 | |
| 72455 chr11 manual_curation CDS 31508060 31508126 . + 0 Parent=GSCOCT00001047001 | |
| 72456 chr11 manual_curation CDS 31507616 31507811 . + 2 Parent=GSCOCT00001047001 | |
| 72457 chr11 manual_curation CDS 31506403 31506449 . + 0 Parent=GSCOCT00001047001 | |
| 72458 chr11 manual_curation CDS 31506144 31506240 . + 2 Parent=GSCOCT00001047001 | |
| 72459 chr11 manual_curation CDS 31505878 31506023 . + 0 Parent=GSCOCT00001047001 | |
| 72460 chr11 manual_curation CDS 31505656 31505763 . + 0 Parent=GSCOCT00001047001 | |
| 72461 chr11 manual_curation CDS 31505236 31505373 . + 0 Parent=GSCOCT00001047001 | |
| 72462 chr11 manual_curation gene 31514474 31515769 . - . ID=GSCOCG00001046001;Name=Cc11_g14890 | |
| 72463 chr11 manual_curation mRNA 31514474 31515769 . - . ID=GSCOCT00001046001;Parent=GSCOCG00001046001;Name=Cc11_g14890 | |
| 72464 chr11 manual_curation polypeptide 31514597 31515769 . - . ID=GSCOCP00001046001;Dbxref=GENE3D:G3DSA:3.30.730.10,InterPro:IPR001471,InterPro:IPR016177,PFAM:PF00847,PRINTS:PR00367,PROFILE:PS51032,SMART:SM00380,SUPERFAMILY:SSF54171,SwissProt:Q6J9Q2,SwissProt:Q9FZ90,SwissProt:Q9M644,TAIR:AT1G28160.1,TAIR:AT5G13910.1,TAIR:AT5G18560.1,TrEMBL:B9GMV6,TrEMBL:B9GYV0,TrEMBL:B9RG14;Derives_from=GSCOCT00001046001;Name=Cc11_g14890;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:LEP,CC_gene:ERF087,CC_gene:ERF086;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001046001~ Hypothetical protein~ LEP~ missing_functional_completeness;original_location=join(192220..192615%2C192685..192736%2C192845..193392);owner=coffea | |
| 72465 chr11 manual_curation exon 31515374 31515769 . - . Parent=GSCOCT00001046001 | |
| 72466 chr11 manual_curation exon 31515253 31515304 . - . Parent=GSCOCT00001046001 | |
| 72467 chr11 manual_curation exon 31514474 31515144 . - . Parent=GSCOCT00001046001 | |
| 72468 chr11 manual_curation CDS 31515374 31515769 . - 0 Parent=GSCOCT00001046001 | |
| 72469 chr11 manual_curation CDS 31515253 31515304 . - 0 Parent=GSCOCT00001046001 | |
| 72470 chr11 manual_curation CDS 31514597 31515144 . - 1 Parent=GSCOCT00001046001 | |
| 72471 chr11 manual_curation gene 31520890 31522186 . - . ID=GSCOCG00001045001;Name=Cc11_g14900 | |
| 72472 chr11 manual_curation mRNA 31520890 31522186 . - . ID=GSCOCT00001045001;Parent=GSCOCG00001045001;Name=Cc11_g14900 | |
| 72473 chr11 manual_curation polypeptide 31521257 31521909 . - . ID=GSCOCP00001045001;Dbxref=InterPro:IPR000592,InterPro:IPR011332,PANTHER:PTHR11594,PFAM:PF01667,PRODOM:PD004466,PROSITE:PS01168,SUPERFAMILY:SSF57829,SwissProt:O64650,SwissProt:Q8L953,TAIR:AT2G45710.1,TAIR:AT5G47930.1;Derives_from=GSCOCT00001045001;Name=Cc11_g14900;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:40S ribosomal protein S27-1,CC_functional_completeness:modules,CC_gene:RPS27B,CC_gene:RPS27A,CC_gene:RPS27D;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001045001~ 40S ribosomal protein S27-1~ RPS27B~ modules;original_location=join(186080..186259%2C186453..186481%2C186606..186732);owner=coffea | |
| 72474 chr11 manual_curation exon 31521730 31522186 . - . Parent=GSCOCT00001045001 | |
| 72475 chr11 manual_curation exon 31521508 31521536 . - . Parent=GSCOCT00001045001 | |
| 72476 chr11 manual_curation exon 31520890 31521383 . - . Parent=GSCOCT00001045001 | |
| 72477 chr11 manual_curation CDS 31521730 31521909 . - 0 Parent=GSCOCT00001045001 | |
| 72478 chr11 manual_curation CDS 31521508 31521536 . - 0 Parent=GSCOCT00001045001 | |
| 72479 chr11 manual_curation CDS 31521257 31521383 . - 2 Parent=GSCOCT00001045001 | |
| 72480 chr11 manual_curation gene 31531223 31536892 . + . ID=GSCOCG00001044001;Name=Cc11_g14910 | |
| 72481 chr11 manual_curation mRNA 31531223 31536892 . + . ID=GSCOCT00001044001;Parent=GSCOCG00001044001;Name=Cc11_g14910 | |
| 72482 chr11 manual_curation polypeptide 31531223 31536892 . + . ID=GSCOCP00001044001;Dbxref=TAIR:AT5G13390.1,TrEMBL:B9GMV2,TrEMBL:B9RG19,TrEMBL:D7TFK4;Derives_from=GSCOCT00001044001;Name=Cc11_g14910;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:no exine formation 1,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001044001~ no exine formation 1~ unknown_gene~ complete;original_location=complement(join(175510..176766%2C173073..173644%2C172706..172925%2C171097..172449));owner=coffea | |
| 72483 chr11 manual_curation exon 31535540 31536892 . + . Parent=GSCOCT00001044001 | |
| 72484 chr11 manual_curation exon 31535064 31535283 . + . Parent=GSCOCT00001044001 | |
| 72485 chr11 manual_curation exon 31534345 31534916 . + . Parent=GSCOCT00001044001 | |
| 72486 chr11 manual_curation exon 31531223 31532479 . + . Parent=GSCOCT00001044001 | |
| 72487 chr11 manual_curation CDS 31535540 31536892 . + 0 Parent=GSCOCT00001044001 | |
| 72488 chr11 manual_curation CDS 31535064 31535283 . + 2 Parent=GSCOCT00001044001 | |
| 72489 chr11 manual_curation CDS 31534345 31534916 . + 0 Parent=GSCOCT00001044001 | |
| 72490 chr11 manual_curation CDS 31531223 31532479 . + 0 Parent=GSCOCT00001044001 | |
| 72491 chr11 manual_curation gene 31538415 31540738 . + . ID=GSCOCG00001042001;Name=Cc11_g14920 | |
| 72492 chr11 manual_curation mRNA 31538415 31540738 . + . ID=GSCOCT00001042001;Parent=GSCOCG00001042001;Name=Cc11_g14920 | |
| 72493 chr11 manual_curation polypeptide 31538558 31540509 . + . ID=GSCOCP00001042001;Dbxref=SwissProt:Q67YC9,TAIR:AT3G23760.1,TAIR:AT4G14100.1,TrEMBL:B9RG20,TrEMBL:D7MH74,TrEMBL:D7TFK2;Derives_from=GSCOCT00001042001;Name=Cc11_g14920;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterized protein At4g14100,CC_functional_completeness:modules,CC_gene:At4g14100;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001042001~ Uncharacterized protein At4g14100~ At4g14100~ modules;original_location=complement(join(168858..169431%2C167480..167631));owner=coffea | |
| 72494 chr11 manual_curation exon 31540358 31540738 . + . Parent=GSCOCT00001042001 | |
| 72495 chr11 manual_curation exon 31538415 31539131 . + . Parent=GSCOCT00001042001 | |
| 72496 chr11 manual_curation CDS 31540358 31540509 . + 1 Parent=GSCOCT00001042001 | |
| 72497 chr11 manual_curation CDS 31538558 31539131 . + 0 Parent=GSCOCT00001042001 | |
| 72498 chr11 manual_curation gene 31551928 31554978 . - . ID=GSCOCG00001041001;Name=Cc11_g14930 | |
| 72499 chr11 manual_curation mRNA 31551928 31554978 . - . ID=GSCOCT00001041001;Parent=GSCOCG00001041001;Name=Cc11_g14930 | |
| 72500 chr11 manual_curation polypeptide 31552207 31554566 . - . ID=GSCOCP00001041001;Dbxref=InterPro:IPR000109,InterPro:IPR016196,InterPro:IPR018456,PFAM:PF00854,PROSITE:PS01022,SUPERFAMILY:SSF103473,SwissProt:Q9LFB8,SwissProt:Q9LYR6,SwissProt:Q9M390,TAIR:AT3G54140.1,TAIR:AT5G01180.1,TAIR:AT5G13400.1,TrEMBL:A5APU8,TrEMBL:A5CAB1,TrEMBL:F6HJ75;Derives_from=GSCOCT00001041001;Name=Cc11_g14930;Ontology_term=CC_evidence_code:ISS,GO:0005215,GO:0006857,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Probable peptide/nitrate transporter At5g13400,CC_functional_completeness:complete,CC_gene:At5g13400,CC_gene:PTR1,CC_gene:PTR5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001041001~ Probable peptide/nitrate transporter At5g13400~ At5g13400~ complete;original_location=join(153423..153654%2C153745..153962%2C154106..154686%2C154912..155782);owner=coffea | |
| 72501 chr11 manual_curation exon 31554335 31554978 . - . Parent=GSCOCT00001041001 | |
| 72502 chr11 manual_curation exon 31554027 31554244 . - . Parent=GSCOCT00001041001 | |
| 72503 chr11 manual_curation exon 31553303 31553883 . - . Parent=GSCOCT00001041001 | |
| 72504 chr11 manual_curation exon 31551928 31553077 . - . Parent=GSCOCT00001041001 | |
| 72505 chr11 manual_curation CDS 31554335 31554566 . - 0 Parent=GSCOCT00001041001 | |
| 72506 chr11 manual_curation CDS 31554027 31554244 . - 1 Parent=GSCOCT00001041001 | |
| 72507 chr11 manual_curation CDS 31553303 31553883 . - 0 Parent=GSCOCT00001041001 | |
| 72508 chr11 manual_curation CDS 31552207 31553077 . - 2 Parent=GSCOCT00001041001 | |
| 72509 chr11 manual_curation gene 31556288 31559368 . + . ID=GSCOCG00001039001;Name=Cc11_g14940 | |
| 72510 chr11 manual_curation mRNA 31556288 31559368 . + . ID=GSCOCT00001039001;Parent=GSCOCG00001039001;Name=Cc11_g14940 | |
| 72511 chr11 manual_curation polypeptide 31556288 31558987 . + . ID=GSCOCP00001039001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002403,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00465,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:P93596,SwissProt:P93846,SwissProt:Q9SAA9,TAIR:AT1G11680.1,TAIR:AT3G19270.1,TAIR:AT5G45340.1,TrEMBL:A0PFU3,TrEMBL:B9GMU7,TrEMBL:D9J0A9;Derives_from=GSCOCT00001039001;Name=Cc11_g14940;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,CC_EC_number:1.14.13.70,PRODUCT:Sterol 14-demethylase,CC_functional_completeness:complete,CC_gene:CYP51G1,CC_gene:CYP51;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001039001~ Sterol 14-demethylase~ CYP51G1~ complete;original_location=complement(join(151240..151701%2C149002..150000));owner=coffea | |
| 72512 chr11 manual_curation exon 31557989 31559368 . + . Parent=GSCOCT00001039001 | |
| 72513 chr11 manual_curation exon 31556288 31556749 . + . Parent=GSCOCT00001039001 | |
| 72514 chr11 manual_curation CDS 31557989 31558987 . + 0 Parent=GSCOCT00001039001 | |
| 72515 chr11 manual_curation CDS 31556288 31556749 . + 0 Parent=GSCOCT00001039001 | |
| 72516 chr11 manual_curation gene 31559542 31563458 . - . ID=GSCOCG00001038001;Name=Cc11_g14950 | |
| 72517 chr11 manual_curation mRNA 31559542 31563458 . - . ID=GSCOCT00001038001;Parent=GSCOCG00001038001;Name=Cc11_g14950 | |
| 72518 chr11 manual_curation polypeptide 31559834 31563328 . - . ID=GSCOCP00001038001;Dbxref=InterPro:IPR001179,PANTHER:PTHR10516,PFAM:PF00254,PROFILE:PS50059,SwissProt:O81864,SwissProt:Q9LYR5,TAIR:AT4G19830.1,TAIR:AT5G13410.1,TrEMBL:B9GMU6,TrEMBL:C6TLD4,TrEMBL:D7TFJ5;Derives_from=GSCOCT00001038001;Name=Cc11_g14950;Ontology_term=CC_evidence_code:ISS,GO:0006457,CC_EC_number:missing_EC_number,PRODUCT:Peptidyl-prolyl cis-trans isomerase,CC_functional_completeness:modules,CC_gene:FKBP19,CC_gene:FKBP17-1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001038001~ Peptidyl-prolyl cis-trans isomerase~ FKBP19~ modules;original_location=join(144661..144741%2C144871..144949%2C145280..145429%2C145925..146010%2C146093..146143%2C146462..146542%2C146645..146689%2C146811..146866%2C147910..147985%2C148060..148155);owner=coffea | |
| 72519 chr11 manual_curation exon 31563248 31563458 . - . Parent=GSCOCT00001038001 | |
| 72520 chr11 manual_curation exon 31563040 31563118 . - . Parent=GSCOCT00001038001 | |
| 72521 chr11 manual_curation exon 31562560 31562709 . - . Parent=GSCOCT00001038001 | |
| 72522 chr11 manual_curation exon 31561979 31562064 . - . Parent=GSCOCT00001038001 | |
| 72523 chr11 manual_curation exon 31561846 31561896 . - . Parent=GSCOCT00001038001 | |
| 72524 chr11 manual_curation exon 31561447 31561527 . - . Parent=GSCOCT00001038001 | |
| 72525 chr11 manual_curation exon 31561300 31561344 . - . Parent=GSCOCT00001038001 | |
| 72526 chr11 manual_curation exon 31561123 31561178 . - . Parent=GSCOCT00001038001 | |
| 72527 chr11 manual_curation exon 31560004 31560079 . - . Parent=GSCOCT00001038001 | |
| 72528 chr11 manual_curation exon 31559542 31559929 . - . Parent=GSCOCT00001038001 | |
| 72529 chr11 manual_curation CDS 31563248 31563328 . - 0 Parent=GSCOCT00001038001 | |
| 72530 chr11 manual_curation CDS 31563040 31563118 . - 0 Parent=GSCOCT00001038001 | |
| 72531 chr11 manual_curation CDS 31562560 31562709 . - 1 Parent=GSCOCT00001038001 | |
| 72532 chr11 manual_curation CDS 31561979 31562064 . - 1 Parent=GSCOCT00001038001 | |
| 72533 chr11 manual_curation CDS 31561846 31561896 . - 0 Parent=GSCOCT00001038001 | |
| 72534 chr11 manual_curation CDS 31561447 31561527 . - 0 Parent=GSCOCT00001038001 | |
| 72535 chr11 manual_curation CDS 31561300 31561344 . - 0 Parent=GSCOCT00001038001 | |
| 72536 chr11 manual_curation CDS 31561123 31561178 . - 0 Parent=GSCOCT00001038001 | |
| 72537 chr11 manual_curation CDS 31560004 31560079 . - 2 Parent=GSCOCT00001038001 | |
| 72538 chr11 manual_curation CDS 31559834 31559929 . - 0 Parent=GSCOCT00001038001 | |
| 72539 chr11 manual_curation gene 31563878 31568471 . - . ID=GSCOCG00001037001;Name=Cc11_g14960 | |
| 72540 chr11 manual_curation mRNA 31563878 31568471 . - . ID=GSCOCT00001037001;Parent=GSCOCG00001037001;Name=Cc11_g14960 | |
| 72541 chr11 manual_curation polypeptide 31564122 31568227 . - . ID=GSCOCP00001037001;Dbxref=GENE3D:G3DSA:3.20.20.70,InterPro:IPR001585,InterPro:IPR004732,InterPro:IPR013785,InterPro:IPR014634,InterPro:IPR018225,PANTHER:PTHR10683,PFAM:PF00923,PIR:PIRSF036915,PROSITE:PS01054,SwissProt:A0LTY8,SwissProt:A9WT40,SwissProt:Q829U5,TAIR:AT5G13420.1,TIGRFAMs:TIGR00876,TrEMBL:B9GMU5,TrEMBL:B9GZ15,TrEMBL:Q38HS6;Derives_from=GSCOCT00001037001;Name=Cc11_g14960;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004801,GO:0005737,GO:0005975,GO:0006098,GO:0008152,CC_EC_number:2.2.1.2,PRODUCT:Transaldolase,CC_functional_completeness:modules,CC_gene:tal,CC_gene:tal2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001037001~ Transaldolase~ tal~ modules;original_location=join(139762..139955%2C141450..141621%2C141800..141849%2C142169..142469%2C142988..143176%2C143268..143450%2C143622..143867);owner=coffea | |
| 72542 chr11 manual_curation exon 31568034 31568471 . - . Parent=GSCOCT00001037001 | |
| 72543 chr11 manual_curation exon 31566368 31566539 . - . Parent=GSCOCT00001037001 | |
| 72544 chr11 manual_curation exon 31566140 31566189 . - . Parent=GSCOCT00001037001 | |
| 72545 chr11 manual_curation exon 31565520 31565820 . - . Parent=GSCOCT00001037001 | |
| 72546 chr11 manual_curation exon 31564813 31565001 . - . Parent=GSCOCT00001037001 | |
| 72547 chr11 manual_curation exon 31564539 31564721 . - . Parent=GSCOCT00001037001 | |
| 72548 chr11 manual_curation exon 31563878 31564367 . - . Parent=GSCOCT00001037001 | |
| 72549 chr11 manual_curation CDS 31568034 31568227 . - 0 Parent=GSCOCT00001037001 | |
| 72550 chr11 manual_curation CDS 31566368 31566539 . - 2 Parent=GSCOCT00001037001 | |
| 72551 chr11 manual_curation CDS 31566140 31566189 . - 0 Parent=GSCOCT00001037001 | |
| 72552 chr11 manual_curation CDS 31565520 31565820 . - 2 Parent=GSCOCT00001037001 | |
| 72553 chr11 manual_curation CDS 31564813 31565001 . - 0 Parent=GSCOCT00001037001 | |
| 72554 chr11 manual_curation CDS 31564539 31564721 . - 0 Parent=GSCOCT00001037001 | |
| 72555 chr11 manual_curation CDS 31564122 31564367 . - 0 Parent=GSCOCT00001037001 | |
| 72556 chr11 manual_curation gene 31579801 31583350 . + . ID=GSCOCG00001034001;Name=Cc11_g14970 | |
| 72557 chr11 manual_curation mRNA 31579801 31583350 . + . ID=GSCOCT00001034001;Parent=GSCOCG00001034001;Name=Cc11_g14970 | |
| 72558 chr11 manual_curation polypeptide 31580262 31582854 . + . ID=GSCOCP00001034001;Dbxref=GENE3D:G3DSA:3.40.525.10,InterPro:IPR001251,InterPro:IPR008273,InterPro:IPR011074,PFAM:PF00650,PFAM:PF03765,PROFILE:PS50191,SMART:SM00516,SUPERFAMILY:SSF46938,SUPERFAMILY:SSF52087,SwissProt:Q55CU8,SwissProt:Q9M0R2,SwissProt:Q9UU99,TAIR:AT1G01630.1,TAIR:AT1G14820.3,TAIR:AT1G75170.1,TrEMBL:A9P9W5,TrEMBL:B9GMU3,TrEMBL:D7TFJ2;Derives_from=GSCOCT00001034001;Name=Cc11_g14970;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Patellin-5,CC_functional_completeness:fragment,CC_gene:rsc5,CC_gene:SPCC23B6.04c,CC_gene:PATL5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001034001~ Putative Patellin-5~ rsc5~ fragment;original_location=complement(join(127494..127727%2C126666..126918%2C126382..126418%2C126045..126150%2C125802..125912%2C125135..125251));owner=coffea | |
| 72559 chr11 manual_curation exon 31582738 31583350 . + . Parent=GSCOCT00001034001 | |
| 72560 chr11 manual_curation exon 31582077 31582187 . + . Parent=GSCOCT00001034001 | |
| 72561 chr11 manual_curation exon 31581839 31581944 . + . Parent=GSCOCT00001034001 | |
| 72562 chr11 manual_curation exon 31581571 31581607 . + . Parent=GSCOCT00001034001 | |
| 72563 chr11 manual_curation exon 31581071 31581323 . + . Parent=GSCOCT00001034001 | |
| 72564 chr11 manual_curation exon 31579801 31580495 . + . Parent=GSCOCT00001034001 | |
| 72565 chr11 manual_curation CDS 31582738 31582854 . + 0 Parent=GSCOCT00001034001 | |
| 72566 chr11 manual_curation CDS 31582077 31582187 . + 0 Parent=GSCOCT00001034001 | |
| 72567 chr11 manual_curation CDS 31581839 31581944 . + 2 Parent=GSCOCT00001034001 | |
| 72568 chr11 manual_curation CDS 31581571 31581607 . + 1 Parent=GSCOCT00001034001 | |
| 72569 chr11 manual_curation CDS 31581071 31581323 . + 0 Parent=GSCOCT00001034001 | |
| 72570 chr11 manual_curation CDS 31580262 31580495 . + 0 Parent=GSCOCT00001034001 | |
| 72571 chr11 manual_curation gene 31583847 31586639 . - . ID=GSCOCG00001033001;Name=Cc11_g14980 | |
| 72572 chr11 manual_curation mRNA 31583847 31586639 . - . ID=GSCOCT00001033001;Parent=GSCOCG00001033001;Name=Cc11_g14980 | |
| 72573 chr11 manual_curation polypeptide 31584164 31586500 . - . ID=GSCOCP00001033001;Dbxref=GENE3D:G3DSA:2.102.10.10,InterPro:IPR004192,InterPro:IPR005805,InterPro:IPR006317,InterPro:IPR014349,InterPro:IPR017941,PANTHER:PTHR10134,PFAM:PF00355,PFAM:PF02921,PRINTS:PR00162,PROFILE:PS51296,SUPERFAMILY:SSF50022,SUPERFAMILY:SSF81502,SwissProt:P37841,SwissProt:P51132,SwissProt:P51133,TAIR:AT5G13430.1,TAIR:AT5G13440.1,TIGRFAMs:TIGR01416,TrEMBL:B9GMU2,TrEMBL:B9GZ18,TrEMBL:B9RG04;Derives_from=GSCOCT00001033001;Name=Cc11_g14980;Ontology_term=CC_evidence_code:ISS,GO:0008121,GO:0016020,GO:0016491,GO:0055114,CC_EC_number:1.10.2.2,CC_EC_number:1.10.2.2,PRODUCT:Cytochrome b-c1 complex subunit Rieske-2%2C mitochondrial,CC_functional_completeness:complete,CC_gene:FES1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001033001~ Cytochrome b-c1 complex subunit Rieske-2%2C mitochondrial~ FES1~ complete;original_location=join(121489..121681%2C123182..123825);owner=coffea | |
| 72574 chr11 manual_curation exon 31586308 31586639 . - . Parent=GSCOCT00001033001 | |
| 72575 chr11 manual_curation exon 31583847 31584807 . - . Parent=GSCOCT00001033001 | |
| 72576 chr11 manual_curation CDS 31586308 31586500 . - 0 Parent=GSCOCT00001033001 | |
| 72577 chr11 manual_curation CDS 31584164 31584807 . - 1 Parent=GSCOCT00001033001 | |
| 72578 chr11 manual_curation gene 31587372 31592336 . - . ID=GSCOCG00001032001;Name=Cc11_g14990 | |
| 72579 chr11 manual_curation mRNA 31587372 31592336 . - . ID=GSCOCT00001032001;Parent=GSCOCG00001032001;Name=Cc11_g14990 | |
| 72580 chr11 manual_curation polypeptide 31587866 31592336 . - . ID=GSCOCP00001032001;Dbxref=GENE3D:G3DSA:3.40.50.800,InterPro:IPR000738,InterPro:IPR002314,InterPro:IPR002315,InterPro:IPR004154,InterPro:IPR006195,InterPro:IPR009068,InterPro:IPR018160,PANTHER:PTHR10745,PFAM:PF00458,PFAM:PF00587,PFAM:PF03129,PRINTS:PR01043,PROFILE:PS50862,PROFILE:PS51185,SUPERFAMILY:SSF47060,SUPERFAMILY:SSF52954,SwissProt:O23627,SwissProt:Q5RBL1,SwissProt:Q9CZD3,TAIR:AT1G29870.1,TAIR:AT1G29880.1,TAIR:AT3G44740.1,TIGRFAMs:TIGR00389,TrEMBL:B9GMU1,TrEMBL:B9GZ19,TrEMBL:D7SH83;Derives_from=GSCOCT00001032001;Name=Cc11_g14990;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0004812,GO:0004820,GO:0005524,GO:0005737,GO:0006412,GO:0006418,GO:0006426,CC_EC_number:6.1.1.14,PRODUCT:Glycine--tRNA ligase 1%2C mitochondrial,CC_functional_completeness:complete,CC_gene:GLYRS-1,CC_gene:Gars,CC_gene:GARS;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001032001~ Glycine--tRNA ligase 1%2C mitochondrial~ GLYRS-1~ complete;original_location=join(115653..116156%2C116870..117252%2C117636..117753%2C118077..118271%2C118423..118647%2C118856..118915%2C119020..119100%2C119323..119728%2C119888..120123);owner=coffea | |
| 72581 chr11 manual_curation exon 31591833 31592336 . - . Parent=GSCOCT00001032001 | |
| 72582 chr11 manual_curation exon 31590737 31591119 . - . Parent=GSCOCT00001032001 | |
| 72583 chr11 manual_curation exon 31590236 31590353 . - . Parent=GSCOCT00001032001 | |
| 72584 chr11 manual_curation exon 31589718 31589912 . - . Parent=GSCOCT00001032001 | |
| 72585 chr11 manual_curation exon 31589342 31589566 . - . Parent=GSCOCT00001032001 | |
| 72586 chr11 manual_curation exon 31589074 31589133 . - . Parent=GSCOCT00001032001 | |
| 72587 chr11 manual_curation exon 31588889 31588969 . - . Parent=GSCOCT00001032001 | |
| 72588 chr11 manual_curation exon 31588261 31588666 . - . Parent=GSCOCT00001032001 | |
| 72589 chr11 manual_curation exon 31587372 31588101 . - . Parent=GSCOCT00001032001 | |
| 72590 chr11 manual_curation CDS 31591833 31592336 . - 0 Parent=GSCOCT00001032001 | |
| 72591 chr11 manual_curation CDS 31590737 31591119 . - 0 Parent=GSCOCT00001032001 | |
| 72592 chr11 manual_curation CDS 31590236 31590353 . - 2 Parent=GSCOCT00001032001 | |
| 72593 chr11 manual_curation CDS 31589718 31589912 . - 0 Parent=GSCOCT00001032001 | |
| 72594 chr11 manual_curation CDS 31589342 31589566 . - 0 Parent=GSCOCT00001032001 | |
| 72595 chr11 manual_curation CDS 31589074 31589133 . - 0 Parent=GSCOCT00001032001 | |
| 72596 chr11 manual_curation CDS 31588889 31588969 . - 0 Parent=GSCOCT00001032001 | |
| 72597 chr11 manual_curation CDS 31588261 31588666 . - 0 Parent=GSCOCT00001032001 | |
| 72598 chr11 manual_curation CDS 31587866 31588101 . - 1 Parent=GSCOCT00001032001 | |
| 72599 chr11 manual_curation gene 31592843 31597066 . - . ID=GSCOCG00001031001;Name=Cc11_g15000 | |
| 72600 chr11 manual_curation mRNA 31592843 31597066 . - . ID=GSCOCT00001031001;Parent=GSCOCG00001031001;Name=Cc11_g15000 | |
| 72601 chr11 manual_curation polypeptide 31593210 31596063 . - . ID=GSCOCP00001031001;Dbxref=InterPro:IPR019275,PFAM:PF10063,TAIR:AT1G28140.1,TrEMBL:B9GKE1,TrEMBL:B9RG01,TrEMBL:G7IDX3;Derives_from=GSCOCT00001031001;Name=Cc11_g15000;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001031001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2301%2C transmembrane (InterPro:IPR019275)%3B Has 140 Blast hits to 140 proteins in 72 species: Archae - 0%3B Bacteria - 86%3B Metazoa - 10%3B Fungi - 0%3B Plants - 41%3B Viruses - 0%3B Other Eukaryotes - 3 (source: NCBI BLink).~ unknown_gene~ modules;original_location=join(111926..112219%2C112680..113043%2C113885..113955%2C114433..114531%2C114684..114779);owner=coffea | |
| 72602 chr11 manual_curation exon 31595770 31597066 . - . Parent=GSCOCT00001031001 | |
| 72603 chr11 manual_curation exon 31594946 31595309 . - . Parent=GSCOCT00001031001 | |
| 72604 chr11 manual_curation exon 31594034 31594104 . - . Parent=GSCOCT00001031001 | |
| 72605 chr11 manual_curation exon 31593458 31593556 . - . Parent=GSCOCT00001031001 | |
| 72606 chr11 manual_curation exon 31592843 31593305 . - . Parent=GSCOCT00001031001 | |
| 72607 chr11 manual_curation CDS 31595770 31596063 . - 0 Parent=GSCOCT00001031001 | |
| 72608 chr11 manual_curation CDS 31594946 31595309 . - 0 Parent=GSCOCT00001031001 | |
| 72609 chr11 manual_curation CDS 31594034 31594104 . - 1 Parent=GSCOCT00001031001 | |
| 72610 chr11 manual_curation CDS 31593458 31593556 . - 0 Parent=GSCOCT00001031001 | |
| 72611 chr11 manual_curation CDS 31593210 31593305 . - 0 Parent=GSCOCT00001031001 | |
| 72612 chr11 manual_curation gene 31598188 31601076 . - . ID=GSCOCG00001030001;Name=Cc11_g15010 | |
| 72613 chr11 manual_curation mRNA 31598188 31601076 . - . ID=GSCOCT00001030001;Parent=GSCOCG00001030001;Name=Cc11_g15010 | |
| 72614 chr11 manual_curation polypeptide 31599114 31599839 . - . ID=GSCOCP00001030001;Dbxref=GENE3D:G3DSA:3.30.730.10,InterPro:IPR001471,InterPro:IPR016177,PFAM:PF00847,PRINTS:PR00367,PROFILE:PS51032,SMART:SM00380,SUPERFAMILY:SSF54171,SwissProt:P93007,SwissProt:Q9FH54,SwissProt:Q9LYU3,TAIR:AT2G33710.2,TAIR:AT5G13330.1,TAIR:AT5G61890.1,TrEMBL:C1KH72,TrEMBL:D8VD41,TrEMBL:Q2Q0A9;Derives_from=GSCOCT00001030001;Name=Cc11_g15010;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,CC_EC_number:missing_EC_number,PRODUCT:Putative AP2/EREBP transcription factor,CC_functional_completeness:modules,CC_gene:ERF113,CC_gene:ERF114,CC_gene:ERF112;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001030001~ Putative AP2/EREBP transcription factor~ ERF113~ modules;original_location=108150..108875;owner=coffea | |
| 72615 chr11 manual_curation exon 31598188 31601076 . - . Parent=GSCOCT00001030001 | |
| 72616 chr11 manual_curation CDS 31599114 31599839 . - 0 Parent=GSCOCT00001030001 | |
| 72617 chr11 manual_curation gene 31610874 31616920 . + . ID=GSCOCG00001028001;Name=Cc11_g15020 | |
| 72618 chr11 manual_curation mRNA 31610874 31616920 . + . ID=GSCOCT00001028001;Parent=GSCOCG00001028001;Name=Cc11_g15020 | |
| 72619 chr11 manual_curation polypeptide 31612074 31616661 . + . ID=GSCOCP00001028001;Dbxref=InterPro:IPR003323,InterPro:IPR019400,PFAM:PF10275,PROFILE:PS50802,SwissProt:B2RYG6,SwissProt:Q8LG98,SwissProt:Q96FW1,TAIR:AT1G28120.1,TrEMBL:B9T922,TrEMBL:I1M2E2,TrEMBL:I1ME83;Derives_from=GSCOCT00001028001;Name=Cc11_g15020;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Ubiquitin thioesterase otubain-like,CC_functional_completeness:complete,CC_gene:At1g28120,CC_gene:OTUB1,CC_gene:Otub1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001028001~ Ubiquitin thioesterase otubain-like~ At1g28120~ complete;original_location=complement(join(95860..95915%2C95364..95566%2C94855..94865%2C94461..94526%2C94301..94384%2C94060..94182%2C92473..92525%2C92282..92331%2C92093..92193%2C91328..91594));owner=coffea | |
| 72620 chr11 manual_curation exon 31616395 31616920 . + . Parent=GSCOCT00001028001 | |
| 72621 chr11 manual_curation exon 31615796 31615896 . + . Parent=GSCOCT00001028001 | |
| 72622 chr11 manual_curation exon 31615658 31615707 . + . Parent=GSCOCT00001028001 | |
| 72623 chr11 manual_curation exon 31615464 31615516 . + . Parent=GSCOCT00001028001 | |
| 72624 chr11 manual_curation exon 31613807 31613929 . + . Parent=GSCOCT00001028001 | |
| 72625 chr11 manual_curation exon 31613605 31613688 . + . Parent=GSCOCT00001028001 | |
| 72626 chr11 manual_curation exon 31613463 31613528 . + . Parent=GSCOCT00001028001 | |
| 72627 chr11 manual_curation exon 31613124 31613134 . + . Parent=GSCOCT00001028001 | |
| 72628 chr11 manual_curation exon 31612423 31612625 . + . Parent=GSCOCT00001028001 | |
| 72629 chr11 manual_curation exon 31610874 31612129 . + . Parent=GSCOCT00001028001 | |
| 72630 chr11 manual_curation CDS 31616395 31616661 . + 0 Parent=GSCOCT00001028001 | |
| 72631 chr11 manual_curation CDS 31615796 31615896 . + 1 Parent=GSCOCT00001028001 | |
| 72632 chr11 manual_curation CDS 31615658 31615707 . + 2 Parent=GSCOCT00001028001 | |
| 72633 chr11 manual_curation CDS 31615464 31615516 . + 0 Parent=GSCOCT00001028001 | |
| 72634 chr11 manual_curation CDS 31613807 31613929 . + 0 Parent=GSCOCT00001028001 | |
| 72635 chr11 manual_curation CDS 31613605 31613688 . + 0 Parent=GSCOCT00001028001 | |
| 72636 chr11 manual_curation CDS 31613463 31613528 . + 0 Parent=GSCOCT00001028001 | |
| 72637 chr11 manual_curation CDS 31613124 31613134 . + 1 Parent=GSCOCT00001028001 | |
| 72638 chr11 manual_curation CDS 31612423 31612625 . + 2 Parent=GSCOCT00001028001 | |
| 72639 chr11 manual_curation CDS 31612074 31612129 . + 0 Parent=GSCOCT00001028001 | |
| 72640 chr11 manual_curation gene 31617570 31619508 . - . ID=GSCOCG00001027001;Name=Cc11_g15030 | |
| 72641 chr11 manual_curation mRNA 31617570 31619508 . - . ID=GSCOCT00001027001;Parent=GSCOCG00001027001;Name=Cc11_g15030 | |
| 72642 chr11 manual_curation polypeptide 31618189 31619478 . - . ID=GSCOCP00001027001;Dbxref=InterPro:IPR007201,PFAM:PF04059,SwissProt:Q64M78,SwissProt:Q8W4I9,SwissProt:Q9LYN7,TAIR:AT1G29400.1,TAIR:AT5G07290.1,TAIR:AT5G61960.1,TrEMBL:A5BN23,TrEMBL:B9GZ23,TrEMBL:F6HJ67;Derives_from=GSCOCT00001027001;Name=Cc11_g15030;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein MEI2-like 4,CC_functional_completeness:fragment,CC_gene:ML4,CC_gene:ML1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001027001~ Protein MEI2-like 4~ ML4~ fragment;original_location=join(88511..88546%2C88647..88826%2C89642..89800);owner=coffea | |
| 72643 chr11 manual_curation exon 31619443 31619508 . - . Parent=GSCOCT00001027001 | |
| 72644 chr11 manual_curation exon 31619163 31619342 . - . Parent=GSCOCT00001027001 | |
| 72645 chr11 manual_curation exon 31617570 31618347 . - . Parent=GSCOCT00001027001 | |
| 72646 chr11 manual_curation CDS 31619443 31619478 . - 0 Parent=GSCOCT00001027001 | |
| 72647 chr11 manual_curation CDS 31619163 31619342 . - 0 Parent=GSCOCT00001027001 | |
| 72648 chr11 manual_curation CDS 31618189 31618347 . - 0 Parent=GSCOCT00001027001 | |
| 72649 chr11 manual_curation gene 31619591 31627109 . - . ID=GSCOCG00001026001;Name=Cc11_g15040 | |
| 72650 chr11 manual_curation mRNA 31619591 31627109 . - . ID=GSCOCT00001026001;Parent=GSCOCG00001026001;Name=Cc11_g15040 | |
| 72651 chr11 manual_curation polypeptide 31619591 31625904 . - . ID=GSCOCP00001026001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR007201,InterPro:IPR012677,PFAM:PF00076,PFAM:PF04059,PROFILE:PS50102,SMART:SM00360,SwissProt:Q64M78,SwissProt:Q6ZI17,SwissProt:Q8W4I9,TAIR:AT1G29400.1,TAIR:AT5G07290.1,TAIR:AT5G61960.1,TrEMBL:A5BN23,TrEMBL:F6HJ67,TrEMBL:Q6J732;Derives_from=GSCOCT00001026001;Name=Cc11_g15040;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein MEI2-like 4,CC_functional_completeness:complete,CC_gene:ML4,CC_gene:ML1,CC_gene:ML2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001026001~ Putative Protein MEI2-like 4~ ML4~ complete;original_location=join(82085..82159%2C82332..82377%2C83987..84331%2C84568..84992%2C85083..85241%2C85415..85531%2C85614..85762%2C86035..86132%2C86225..86638%2C86899..87550%2C88296..88398);owner=coffea | |
| 72652 chr11 manual_curation exon 31626778 31627109 . - . Parent=GSCOCT00001026001 | |
| 72653 chr11 manual_curation exon 31625830 31626040 . - . Parent=GSCOCT00001026001 | |
| 72654 chr11 manual_curation exon 31625612 31625657 . - . Parent=GSCOCT00001026001 | |
| 72655 chr11 manual_curation exon 31623658 31624002 . - . Parent=GSCOCT00001026001 | |
| 72656 chr11 manual_curation exon 31622997 31623421 . - . Parent=GSCOCT00001026001 | |
| 72657 chr11 manual_curation exon 31622748 31622906 . - . Parent=GSCOCT00001026001 | |
| 72658 chr11 manual_curation exon 31622458 31622574 . - . Parent=GSCOCT00001026001 | |
| 72659 chr11 manual_curation exon 31622227 31622375 . - . Parent=GSCOCT00001026001 | |
| 72660 chr11 manual_curation exon 31621857 31621954 . - . Parent=GSCOCT00001026001 | |
| 72661 chr11 manual_curation exon 31621351 31621764 . - . Parent=GSCOCT00001026001 | |
| 72662 chr11 manual_curation exon 31620439 31621090 . - . Parent=GSCOCT00001026001 | |
| 72663 chr11 manual_curation exon 31619591 31619693 . - . Parent=GSCOCT00001026001 | |
| 72664 chr11 manual_curation CDS 31625830 31625904 . - 0 Parent=GSCOCT00001026001 | |
| 72665 chr11 manual_curation CDS 31625612 31625657 . - 0 Parent=GSCOCT00001026001 | |
| 72666 chr11 manual_curation CDS 31623658 31624002 . - 1 Parent=GSCOCT00001026001 | |
| 72667 chr11 manual_curation CDS 31622997 31623421 . - 1 Parent=GSCOCT00001026001 | |
| 72668 chr11 manual_curation CDS 31622748 31622906 . - 0 Parent=GSCOCT00001026001 | |
| 72669 chr11 manual_curation CDS 31622458 31622574 . - 0 Parent=GSCOCT00001026001 | |
| 72670 chr11 manual_curation CDS 31622227 31622375 . - 0 Parent=GSCOCT00001026001 | |
| 72671 chr11 manual_curation CDS 31621857 31621954 . - 2 Parent=GSCOCT00001026001 | |
| 72672 chr11 manual_curation CDS 31621351 31621764 . - 1 Parent=GSCOCT00001026001 | |
| 72673 chr11 manual_curation CDS 31620439 31621090 . - 1 Parent=GSCOCT00001026001 | |
| 72674 chr11 manual_curation CDS 31619591 31619693 . - 2 Parent=GSCOCT00001026001 | |
| 72675 chr11 manual_curation gene 31635693 31645343 . + . ID=GSCOCG00001024001;Name=Cc11_g15050 | |
| 72676 chr11 manual_curation mRNA 31635693 31645343 . + . ID=GSCOCT00001024001;Parent=GSCOCG00001024001;Name=Cc11_g15050 | |
| 72677 chr11 manual_curation polypeptide 31635693 31645343 . + . ID=GSCOCP00001024001;Dbxref=InterPro:IPR001214,InterPro:IPR003606,InterPro:IPR003616,InterPro:IPR007728,PFAM:PF00856,PFAM:PF05033,PROFILE:PS50280,PROFILE:PS50867,PROFILE:PS50868,SMART:SM00317,SMART:SM00468,SMART:SM00508,SwissProt:O82175,SwissProt:Q8GZB6,SwissProt:Q8VZ17,TAIR:AT2G22740.2,TAIR:AT2G35160.1,TAIR:AT5G13960.1,TrEMBL:B9GNG0,TrEMBL:F6H428,TrEMBL:I1LZX0;Derives_from=GSCOCT00001024001;Name=Cc11_g15050;Ontology_term=CC_evidence_code:ISS,GO:0005634,GO:0008270,GO:0016568,GO:0018024,CC_EC_number:2.1.1.43,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:SUVH4,CC_gene:SUVH6,CC_gene:SUVH5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001024001~ Hypothetical protein~ SUVH4~ missing_functional_completeness;original_location=complement(join(72252..72296%2C70975..71154%2C69885..70565%2C69469..69537%2C68611..68660%2C68438..68526%2C67351..67510%2C64817..64922%2C64542..64724%2C63558..63794%2C62646..62759));owner=coffea | |
| 72678 chr11 manual_curation exon 31645230 31645343 . + . Parent=GSCOCT00001024001 | |
| 72679 chr11 manual_curation exon 31644195 31644431 . + . Parent=GSCOCT00001024001 | |
| 72680 chr11 manual_curation exon 31643265 31643447 . + . Parent=GSCOCT00001024001 | |
| 72681 chr11 manual_curation exon 31643067 31643172 . + . Parent=GSCOCT00001024001 | |
| 72682 chr11 manual_curation exon 31640479 31640638 . + . Parent=GSCOCT00001024001 | |
| 72683 chr11 manual_curation exon 31639463 31639551 . + . Parent=GSCOCT00001024001 | |
| 72684 chr11 manual_curation exon 31639329 31639378 . + . Parent=GSCOCT00001024001 | |
| 72685 chr11 manual_curation exon 31638452 31638520 . + . Parent=GSCOCT00001024001 | |
| 72686 chr11 manual_curation exon 31637424 31638104 . + . Parent=GSCOCT00001024001 | |
| 72687 chr11 manual_curation exon 31636835 31637014 . + . Parent=GSCOCT00001024001 | |
| 72688 chr11 manual_curation exon 31635693 31635737 . + . Parent=GSCOCT00001024001 | |
| 72689 chr11 manual_curation CDS 31645230 31645343 . + 0 Parent=GSCOCT00001024001 | |
| 72690 chr11 manual_curation CDS 31644195 31644431 . + 0 Parent=GSCOCT00001024001 | |
| 72691 chr11 manual_curation CDS 31643265 31643447 . + 0 Parent=GSCOCT00001024001 | |
| 72692 chr11 manual_curation CDS 31643067 31643172 . + 2 Parent=GSCOCT00001024001 | |
| 72693 chr11 manual_curation CDS 31640479 31640638 . + 1 Parent=GSCOCT00001024001 | |
| 72694 chr11 manual_curation CDS 31639463 31639551 . + 2 Parent=GSCOCT00001024001 | |
| 72695 chr11 manual_curation CDS 31639329 31639378 . + 0 Parent=GSCOCT00001024001 | |
| 72696 chr11 manual_curation CDS 31638452 31638520 . + 0 Parent=GSCOCT00001024001 | |
| 72697 chr11 manual_curation CDS 31637424 31638104 . + 0 Parent=GSCOCT00001024001 | |
| 72698 chr11 manual_curation CDS 31636835 31637014 . + 0 Parent=GSCOCT00001024001 | |
| 72699 chr11 manual_curation CDS 31635693 31635737 . + 0 Parent=GSCOCT00001024001 | |
| 72700 chr11 manual_curation gene 31647722 31650356 . + . ID=GSCOCG00001022001;Name=Cc11_g15060 | |
| 72701 chr11 manual_curation mRNA 31647722 31650356 . + . ID=GSCOCT00001022001;Parent=GSCOCG00001022001;Name=Cc11_g15060 | |
| 72702 chr11 manual_curation polypeptide 31647959 31650356 . + . ID=GSCOCP00001022001;Dbxref=InterPro:IPR017877,PROFILE:PS50090,TAIR:AT2G33550.1,TAIR:AT2G35640.1,TAIR:AT4G31270.1,TrEMBL:B9GMT2,TrEMBL:B9RFZ6,TrEMBL:F6HJ64;Derives_from=GSCOCT00001022001;Name=Cc11_g15060;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001022001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=complement(join(59262..60030%2C57633..57829));owner=coffea | |
| 72703 chr11 manual_curation exon 31650160 31650356 . + . Parent=GSCOCT00001022001 | |
| 72704 chr11 manual_curation exon 31647722 31648727 . + . Parent=GSCOCT00001022001 | |
| 72705 chr11 manual_curation CDS 31650160 31650356 . + 1 Parent=GSCOCT00001022001 | |
| 72706 chr11 manual_curation CDS 31647959 31648727 . + 0 Parent=GSCOCT00001022001 | |
| 72707 chr11 manual_curation gene 31650500 31651790 . + . ID=GSCOCG00001021001;Name=Cc11_g15070 | |
| 72708 chr11 manual_curation mRNA 31650500 31651790 . + . ID=GSCOCT00001021001;Parent=GSCOCG00001021001;Name=Cc11_g15070 | |
| 72709 chr11 manual_curation polypeptide 31650500 31651074 . + . ID=GSCOCP00001021001;Dbxref=TAIR:AT2G33550.1,TrEMBL:F6HJ64,TrEMBL:G7KSV7,TrEMBL:I1LFM1;Derives_from=GSCOCT00001021001;Name=Cc11_g15070;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Homeodomain-like superfamily protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001021001~ Homeodomain-like superfamily protein~ unknown_gene~ fragment;original_location=complement(join(57480..57489%2C56915..57207));owner=coffea | |
| 72710 chr11 manual_curation exon 31650782 31651790 . + . Parent=GSCOCT00001021001 | |
| 72711 chr11 manual_curation exon 31650500 31650509 . + . Parent=GSCOCT00001021001 | |
| 72712 chr11 manual_curation CDS 31650782 31651074 . + 1 Parent=GSCOCT00001021001 | |
| 72713 chr11 manual_curation CDS 31650500 31650509 . + 0 Parent=GSCOCT00001021001 | |
| 72714 chr11 manual_curation gene 31657160 31666873 . + . ID=GSCOCG00001019001;Name=Cc11_g15080 | |
| 72715 chr11 manual_curation mRNA 31657160 31666873 . + . ID=GSCOCT00001019001;Parent=GSCOCG00001019001;Name=Cc11_g15080 | |
| 72716 chr11 manual_curation polypeptide 31657315 31666873 . + . ID=GSCOCP00001019001;Dbxref=GENE3D:G3DSA:1.25.40.20,GENE3D:G3DSA:2.30.29.30,InterPro:IPR001164,InterPro:IPR001849,InterPro:IPR002110,InterPro:IPR004148,InterPro:IPR011993,InterPro:IPR020683,PFAM:PF00023,PFAM:PF00169,PFAM:PF01412,PFAM:PF03114,PRINTS:PR00405,PROFILE:PS50003,PROFILE:PS50088,PROFILE:PS50115,PROFILE:PS50297,SMART:SM00105,SMART:SM00233,SMART:SM00248,SMART:SM00721,SUPERFAMILY:SSF48403,SUPERFAMILY:SSF57863,SwissProt:Q5W7F2,SwissProt:Q9FIT8,SwissProt:Q9SMX5,TAIR:AT1G10870.1,TAIR:AT5G13300.1,TAIR:AT5G61980.1,TrEMBL:B9GZ26,TrEMBL:B9RFZ3,TrEMBL:D7TFH8;Derives_from=GSCOCT00001019001;Name=Cc11_g15080;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0005737,GO:0008060,GO:0008270,GO:0032312,CC_EC_number:missing_EC_number,PRODUCT:ADP-ribosylation factor GTPase-activating protein AGD3,CC_functional_completeness:complete,CC_gene:AGD3,CC_gene:AGD1,CC_gene:AGD4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001019001~ ADP-ribosylation factor GTPase-activating protein AGD3~ AGD3~ complete;original_location=complement(join(50630..50674%2C49432..49508%2C48688..48788%2C48470..48540%2C47744..47806%2C46504..46548%2C45806..45871%2C45667..45714%2C45459..45554%2C45336..45377%2C44727..44942%2C44491..44622%2C44156..44380%2C43933..44019%2C43518..43853%2C42395..42540%2C42210..42303%2C41477..41958%2C41116..41230));owner=coffea | |
| 72717 chr11 manual_curation exon 31666759 31666873 . + . Parent=GSCOCT00001019001 | |
| 72718 chr11 manual_curation exon 31666031 31666512 . + . Parent=GSCOCT00001019001 | |
| 72719 chr11 manual_curation exon 31665686 31665779 . + . Parent=GSCOCT00001019001 | |
| 72720 chr11 manual_curation exon 31665449 31665594 . + . Parent=GSCOCT00001019001 | |
| 72721 chr11 manual_curation exon 31664136 31664471 . + . Parent=GSCOCT00001019001 | |
| 72722 chr11 manual_curation exon 31663970 31664056 . + . Parent=GSCOCT00001019001 | |
| 72723 chr11 manual_curation exon 31663609 31663833 . + . Parent=GSCOCT00001019001 | |
| 72724 chr11 manual_curation exon 31663367 31663498 . + . Parent=GSCOCT00001019001 | |
| 72725 chr11 manual_curation exon 31663047 31663262 . + . Parent=GSCOCT00001019001 | |
| 72726 chr11 manual_curation exon 31662612 31662653 . + . Parent=GSCOCT00001019001 | |
| 72727 chr11 manual_curation exon 31662435 31662530 . + . Parent=GSCOCT00001019001 | |
| 72728 chr11 manual_curation exon 31662275 31662322 . + . Parent=GSCOCT00001019001 | |
| 72729 chr11 manual_curation exon 31662118 31662183 . + . Parent=GSCOCT00001019001 | |
| 72730 chr11 manual_curation exon 31661441 31661485 . + . Parent=GSCOCT00001019001 | |
| 72731 chr11 manual_curation exon 31660183 31660245 . + . Parent=GSCOCT00001019001 | |
| 72732 chr11 manual_curation exon 31659449 31659519 . + . Parent=GSCOCT00001019001 | |
| 72733 chr11 manual_curation exon 31659201 31659301 . + . Parent=GSCOCT00001019001 | |
| 72734 chr11 manual_curation exon 31658481 31658557 . + . Parent=GSCOCT00001019001 | |
| 72735 chr11 manual_curation exon 31657160 31657359 . + . Parent=GSCOCT00001019001 | |
| 72736 chr11 manual_curation CDS 31666759 31666873 . + 2 Parent=GSCOCT00001019001 | |
| 72737 chr11 manual_curation CDS 31666031 31666512 . + 0 Parent=GSCOCT00001019001 | |
| 72738 chr11 manual_curation CDS 31665686 31665779 . + 2 Parent=GSCOCT00001019001 | |
| 72739 chr11 manual_curation CDS 31665449 31665594 . + 0 Parent=GSCOCT00001019001 | |
| 72740 chr11 manual_curation CDS 31664136 31664471 . + 0 Parent=GSCOCT00001019001 | |
| 72741 chr11 manual_curation CDS 31663970 31664056 . + 0 Parent=GSCOCT00001019001 | |
| 72742 chr11 manual_curation CDS 31663609 31663833 . + 0 Parent=GSCOCT00001019001 | |
| 72743 chr11 manual_curation CDS 31663367 31663498 . + 0 Parent=GSCOCT00001019001 | |
| 72744 chr11 manual_curation CDS 31663047 31663262 . + 0 Parent=GSCOCT00001019001 | |
| 72745 chr11 manual_curation CDS 31662612 31662653 . + 0 Parent=GSCOCT00001019001 | |
| 72746 chr11 manual_curation CDS 31662435 31662530 . + 0 Parent=GSCOCT00001019001 | |
| 72747 chr11 manual_curation CDS 31662275 31662322 . + 0 Parent=GSCOCT00001019001 | |
| 72748 chr11 manual_curation CDS 31662118 31662183 . + 0 Parent=GSCOCT00001019001 | |
| 72749 chr11 manual_curation CDS 31661441 31661485 . + 0 Parent=GSCOCT00001019001 | |
| 72750 chr11 manual_curation CDS 31660183 31660245 . + 0 Parent=GSCOCT00001019001 | |
| 72751 chr11 manual_curation CDS 31659449 31659519 . + 1 Parent=GSCOCT00001019001 | |
| 72752 chr11 manual_curation CDS 31659201 31659301 . + 2 Parent=GSCOCT00001019001 | |
| 72753 chr11 manual_curation CDS 31658481 31658557 . + 0 Parent=GSCOCT00001019001 | |
| 72754 chr11 manual_curation CDS 31657315 31657359 . + 0 Parent=GSCOCT00001019001 | |
| 72755 chr11 manual_curation gene 31666954 31667981 . - . ID=GSCOCG00001018001;Name=Cc11_g15090 | |
| 72756 chr11 manual_curation mRNA 31666954 31667981 . - . ID=GSCOCT00001018001;Parent=GSCOCG00001018001;Name=Cc11_g15090 | |
| 72757 chr11 manual_curation polypeptide 31667751 31667981 . - . ID=GSCOCP00001018001;Derives_from=GSCOCT00001018001;Name=Cc11_g15090;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001018001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=40008..40238;owner=coffea | |
| 72758 chr11 manual_curation exon 31666954 31667981 . - . Parent=GSCOCT00001018001 | |
| 72759 chr11 manual_curation CDS 31667751 31667981 . - 0 Parent=GSCOCT00001018001 | |
| 72760 chr11 manual_curation gene 31668876 31671145 . + . ID=GSCOCG00001016001;Name=Cc11_g15100 | |
| 72761 chr11 manual_curation mRNA 31668876 31671145 . + . ID=GSCOCT00001016001;Parent=GSCOCG00001016001;Name=Cc11_g15100 | |
| 72762 chr11 manual_curation polypeptide 31669235 31671145 . + . ID=GSCOCP00001016001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR011009,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q9FII5,SwissProt:Q9LYU7,SwissProt:Q9SKB2,TAIR:AT2G31880.1,TAIR:AT5G13290.2,TAIR:AT5G62710.1,TrEMBL:B9RFZ3,TrEMBL:F6HJ63,TrEMBL:F8WS96;Derives_from=GSCOCT00001016001;Name=Cc11_g15100;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Inactive leucine-rich repeat receptor-like protein kinase CORYNE,CC_functional_completeness:complete,CC_gene:CRN,CC_gene:SOBIR1,CC_gene:TDR;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001016001~ Inactive leucine-rich repeat receptor-like protein kinase CORYNE~ CRN~ complete;original_location=complement(join(37871..38754%2C36844..37153));owner=coffea | |
| 72763 chr11 manual_curation exon 31670836 31671145 . + . Parent=GSCOCT00001016001 | |
| 72764 chr11 manual_curation exon 31668876 31670118 . + . Parent=GSCOCT00001016001 | |
| 72765 chr11 manual_curation CDS 31670836 31671145 . + 2 Parent=GSCOCT00001016001 | |
| 72766 chr11 manual_curation CDS 31669235 31670118 . + 0 Parent=GSCOCT00001016001 | |
| 72767 chr11 manual_curation gene 31672336 31673389 . + . ID=GSCOCG00001014001;Name=Cc11_g15110 | |
| 72768 chr11 manual_curation mRNA 31672336 31673389 . + . ID=GSCOCT00001014001;Parent=GSCOCG00001014001;Name=Cc11_g15110 | |
| 72769 chr11 manual_curation polypeptide 31672537 31673157 . + . ID=GSCOCP00001014001;Dbxref=InterPro:IPR009856,PFAM:PF07207,SwissProt:Q03200,TAIR:AT3G26740.1,TrEMBL:A9PJH2,TrEMBL:A9PJL3,TrEMBL:B9GMS6;Derives_from=GSCOCT00001014001;Name=Cc11_g15110;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Predicted protein,CC_functional_completeness:complete,CC_gene:LIR1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001014001~ Predicted protein~ LIR1~ complete;original_location=complement(join(35277..35452%2C35029..35187%2C34832..34904));owner=coffea | |
| 72770 chr11 manual_curation exon 31673085 31673389 . + . Parent=GSCOCT00001014001 | |
| 72771 chr11 manual_curation exon 31672802 31672960 . + . Parent=GSCOCT00001014001 | |
| 72772 chr11 manual_curation exon 31672336 31672712 . + . Parent=GSCOCT00001014001 | |
| 72773 chr11 manual_curation CDS 31673085 31673157 . + 2 Parent=GSCOCT00001014001 | |
| 72774 chr11 manual_curation CDS 31672802 31672960 . + 2 Parent=GSCOCT00001014001 | |
| 72775 chr11 manual_curation CDS 31672537 31672712 . + 0 Parent=GSCOCT00001014001 | |
| 72776 chr11 manual_curation gene 31673438 31675716 . - . ID=GSCOCG00001013001;Name=Cc11_g15120 | |
| 72777 chr11 manual_curation mRNA 31673438 31675716 . - . ID=GSCOCT00001013001;Parent=GSCOCG00001013001;Name=Cc11_g15120 | |
| 72778 chr11 manual_curation polypeptide 31674007 31675545 . - . ID=GSCOCP00001013001;Dbxref=TAIR:AT3G23255.2,TrEMBL:B9GZ30,TrEMBL:B9RFZ1,TrEMBL:D7TYU3;Derives_from=GSCOCT00001013001;Name=Cc11_g15120;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001013001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown.~ unknown_gene~ complete;original_location=join(32444..32532%2C32691..32856%2C32936..32979%2C33125..33238%2C33393..33485%2C33600..33706%2C33843..33982);owner=coffea | |
| 72779 chr11 manual_curation exon 31675457 31675716 . - . Parent=GSCOCT00001013001 | |
| 72780 chr11 manual_curation exon 31675133 31675298 . - . Parent=GSCOCT00001013001 | |
| 72781 chr11 manual_curation exon 31675010 31675053 . - . Parent=GSCOCT00001013001 | |
| 72782 chr11 manual_curation exon 31674751 31674864 . - . Parent=GSCOCT00001013001 | |
| 72783 chr11 manual_curation exon 31674504 31674596 . - . Parent=GSCOCT00001013001 | |
| 72784 chr11 manual_curation exon 31674283 31674389 . - . Parent=GSCOCT00001013001 | |
| 72785 chr11 manual_curation exon 31673438 31674146 . - . Parent=GSCOCT00001013001 | |
| 72786 chr11 manual_curation CDS 31675457 31675545 . - 0 Parent=GSCOCT00001013001 | |
| 72787 chr11 manual_curation CDS 31675133 31675298 . - 2 Parent=GSCOCT00001013001 | |
| 72788 chr11 manual_curation CDS 31675010 31675053 . - 0 Parent=GSCOCT00001013001 | |
| 72789 chr11 manual_curation CDS 31674751 31674864 . - 2 Parent=GSCOCT00001013001 | |
| 72790 chr11 manual_curation CDS 31674504 31674596 . - 2 Parent=GSCOCT00001013001 | |
| 72791 chr11 manual_curation CDS 31674283 31674389 . - 2 Parent=GSCOCT00001013001 | |
| 72792 chr11 manual_curation CDS 31674007 31674146 . - 1 Parent=GSCOCT00001013001 | |
| 72793 chr11 manual_curation gene 31676864 31680739 . + . ID=GSCOCG00001012001;Name=Cc11_g15130 | |
| 72794 chr11 manual_curation mRNA 31676864 31680739 . + . ID=GSCOCT00001012001;Parent=GSCOCG00001012001;Name=Cc11_g15130 | |
| 72795 chr11 manual_curation polypeptide 31677847 31680592 . + . ID=GSCOCP00001012001;Dbxref=TAIR:AT1G28100.4,TrEMBL:B9GZ34,TrEMBL:D7TYT8,TrEMBL:Q8GWB2;Derives_from=GSCOCT00001012001;Name=Cc11_g15130;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001012001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B Has 64 Blast hits to 64 proteins in 27 species: Archae - 0%3B Bacteria - 14%3B Metazoa - 0%3B Fungi - 6%3B Plants - 42%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(30078..30142%2C29887..29970%2C29723..29786%2C29479..29525%2C29171..29225%2C28933..28971%2C28412..28577%2C28157..28220%2C28029..28085%2C27397..27598));owner=coffea | |
| 72796 chr11 manual_curation exon 31676864 31677014 . + . Parent=GSCOCT00001012001 | |
| 72797 chr11 manual_curation exon 31680391 31680739 . + . Parent=GSCOCT00001012001 | |
| 72798 chr11 manual_curation exon 31679904 31679960 . + . Parent=GSCOCT00001012001 | |
| 72799 chr11 manual_curation exon 31679769 31679832 . + . Parent=GSCOCT00001012001 | |
| 72800 chr11 manual_curation exon 31679412 31679577 . + . Parent=GSCOCT00001012001 | |
| 72801 chr11 manual_curation exon 31679018 31679056 . + . Parent=GSCOCT00001012001 | |
| 72802 chr11 manual_curation exon 31678764 31678818 . + . Parent=GSCOCT00001012001 | |
| 72803 chr11 manual_curation exon 31678464 31678510 . + . Parent=GSCOCT00001012001 | |
| 72804 chr11 manual_curation exon 31678203 31678266 . + . Parent=GSCOCT00001012001 | |
| 72805 chr11 manual_curation exon 31678019 31678102 . + . Parent=GSCOCT00001012001 | |
| 72806 chr11 manual_curation exon 31677814 31677911 . + . Parent=GSCOCT00001012001 | |
| 72807 chr11 manual_curation CDS 31680391 31680592 . + 2 Parent=GSCOCT00001012001 | |
| 72808 chr11 manual_curation CDS 31679904 31679960 . + 2 Parent=GSCOCT00001012001 | |
| 72809 chr11 manual_curation CDS 31679769 31679832 . + 1 Parent=GSCOCT00001012001 | |
| 72810 chr11 manual_curation CDS 31679412 31679577 . + 0 Parent=GSCOCT00001012001 | |
| 72811 chr11 manual_curation CDS 31679018 31679056 . + 0 Parent=GSCOCT00001012001 | |
| 72812 chr11 manual_curation CDS 31678764 31678818 . + 2 Parent=GSCOCT00001012001 | |
| 72813 chr11 manual_curation CDS 31678464 31678510 . + 0 Parent=GSCOCT00001012001 | |
| 72814 chr11 manual_curation CDS 31678203 31678266 . + 2 Parent=GSCOCT00001012001 | |
| 72815 chr11 manual_curation CDS 31678019 31678102 . + 2 Parent=GSCOCT00001012001 | |
| 72816 chr11 manual_curation CDS 31677847 31677911 . + 0 Parent=GSCOCT00001012001 | |
| 72817 chr11 manual_curation gene 31680816 31685360 . - . ID=GSCOCG00001011001;Name=Cc11_g15140 | |
| 72818 chr11 manual_curation mRNA 31680816 31685360 . - . ID=GSCOCT00001011001;Parent=GSCOCG00001011001;Name=Cc11_g15140 | |
| 72819 chr11 manual_curation polypeptide 31682826 31685360 . - . ID=GSCOCP00001011001;Dbxref=TAIR:AT3G48860.2,TAIR:AT4G25070.2,TAIR:AT5G13260.1,TrEMBL:A5C2D9,TrEMBL:B9GMS0,TrEMBL:I1LFM2;Derives_from=GSCOCT00001011001;Name=Cc11_g15140;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Predicted protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001011001~ Predicted protein~ unknown_gene~ fragment;original_location=join(22629..22683%2C22792..22910%2C23113..23182%2C23653..23694%2C23859..23899%2C24173..24299%2C25018..25163);owner=coffea | |
| 72820 chr11 manual_curation exon 31680816 31681043 . - . Parent=GSCOCT00001011001 | |
| 72821 chr11 manual_curation exon 31685306 31685360 . - . Parent=GSCOCT00001011001 | |
| 72822 chr11 manual_curation exon 31685079 31685197 . - . Parent=GSCOCT00001011001 | |
| 72823 chr11 manual_curation exon 31684807 31684876 . - . Parent=GSCOCT00001011001 | |
| 72824 chr11 manual_curation exon 31684295 31684336 . - . Parent=GSCOCT00001011001 | |
| 72825 chr11 manual_curation exon 31684090 31684130 . - . Parent=GSCOCT00001011001 | |
| 72826 chr11 manual_curation exon 31683690 31683816 . - . Parent=GSCOCT00001011001 | |
| 72827 chr11 manual_curation exon 31682799 31682971 . - . Parent=GSCOCT00001011001 | |
| 72828 chr11 manual_curation CDS 31685306 31685360 . - 0 Parent=GSCOCT00001011001 | |
| 72829 chr11 manual_curation CDS 31685079 31685197 . - 1 Parent=GSCOCT00001011001 | |
| 72830 chr11 manual_curation CDS 31684807 31684876 . - 0 Parent=GSCOCT00001011001 | |
| 72831 chr11 manual_curation CDS 31684295 31684336 . - 1 Parent=GSCOCT00001011001 | |
| 72832 chr11 manual_curation CDS 31684090 31684130 . - 1 Parent=GSCOCT00001011001 | |
| 72833 chr11 manual_curation CDS 31683690 31683816 . - 0 Parent=GSCOCT00001011001 | |
| 72834 chr11 manual_curation CDS 31682826 31682971 . - 1 Parent=GSCOCT00001011001 | |
| 72835 chr11 manual_curation gene 31685511 31690146 . - . ID=GSCOCG00001010001;Name=Cc11_g15150 | |
| 72836 chr11 manual_curation mRNA 31685511 31690146 . - . ID=GSCOCT00001010001;Parent=GSCOCG00001010001;Name=Cc11_g15150 | |
| 72837 chr11 manual_curation polypeptide 31685511 31689974 . - . ID=GSCOCP00001010001;Dbxref=TAIR:AT3G48860.2,TAIR:AT5G13260.1,TAIR:AT5G23700.1,TrEMBL:B9GZ36,TrEMBL:B9RFY3,TrEMBL:D7TYT5;Derives_from=GSCOCT00001010001;Name=Cc11_g15150;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B INVOLVED IN,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001010001~ unknown protein%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23700.1)%3B Has 12429 Blast hits to 9751 proteins in 897 species: Archae - 180%3B Bacteria - 1190%3B Metazoa - 6552%3B Fungi - 1361%3B Plants - 886%3B Viruses - 50%3B Other Eukaryotes - 2210 (source: NCBI BLink).~ unknown_gene~ fragment;original_location=join(18015..18440%2C19221..19390%2C19726..19801%2C19961..20002%2C20103..20165%2C20676..20725%2C20813..20840%2C21077..21151%2C21231..21341%2C21418..21478%2C22357..22478);owner=coffea | |
| 72838 chr11 manual_curation exon 31689549 31690146 . - . Parent=GSCOCT00001010001 | |
| 72839 chr11 manual_curation exon 31688599 31688768 . - . Parent=GSCOCT00001010001 | |
| 72840 chr11 manual_curation exon 31688188 31688263 . - . Parent=GSCOCT00001010001 | |
| 72841 chr11 manual_curation exon 31687987 31688028 . - . Parent=GSCOCT00001010001 | |
| 72842 chr11 manual_curation exon 31687824 31687886 . - . Parent=GSCOCT00001010001 | |
| 72843 chr11 manual_curation exon 31687264 31687313 . - . Parent=GSCOCT00001010001 | |
| 72844 chr11 manual_curation exon 31687149 31687176 . - . Parent=GSCOCT00001010001 | |
| 72845 chr11 manual_curation exon 31686838 31686912 . - . Parent=GSCOCT00001010001 | |
| 72846 chr11 manual_curation exon 31686648 31686758 . - . Parent=GSCOCT00001010001 | |
| 72847 chr11 manual_curation exon 31686511 31686571 . - . Parent=GSCOCT00001010001 | |
| 72848 chr11 manual_curation exon 31685511 31685632 . - . Parent=GSCOCT00001010001 | |
| 72849 chr11 manual_curation CDS 31689549 31689974 . - 0 Parent=GSCOCT00001010001 | |
| 72850 chr11 manual_curation CDS 31688599 31688768 . - 0 Parent=GSCOCT00001010001 | |
| 72851 chr11 manual_curation CDS 31688188 31688263 . - 2 Parent=GSCOCT00001010001 | |
| 72852 chr11 manual_curation CDS 31687987 31688028 . - 0 Parent=GSCOCT00001010001 | |
| 72853 chr11 manual_curation CDS 31687824 31687886 . - 0 Parent=GSCOCT00001010001 | |
| 72854 chr11 manual_curation CDS 31687264 31687313 . - 0 Parent=GSCOCT00001010001 | |
| 72855 chr11 manual_curation CDS 31687149 31687176 . - 2 Parent=GSCOCT00001010001 | |
| 72856 chr11 manual_curation CDS 31686838 31686912 . - 0 Parent=GSCOCT00001010001 | |
| 72857 chr11 manual_curation CDS 31686648 31686758 . - 0 Parent=GSCOCT00001010001 | |
| 72858 chr11 manual_curation CDS 31686511 31686571 . - 0 Parent=GSCOCT00001010001 | |
| 72859 chr11 manual_curation CDS 31685511 31685632 . - 1 Parent=GSCOCT00001010001 | |
| 72860 chr11 manual_curation gene 31692798 31694413 . - . ID=GSCOCG00001009001;Name=Cc11_g15160 | |
| 72861 chr11 manual_curation mRNA 31692798 31694413 . - . ID=GSCOCT00001009001;Parent=GSCOCG00001009001;Name=Cc11_g15160 | |
| 72862 chr11 manual_curation polypeptide 31692798 31694413 . - . ID=GSCOCP00001009001;Dbxref=InterPro:IPR011684,PFAM:PF07765,TAIR:AT1G03470.1,TAIR:AT2G22560.1,TAIR:AT2G47920.1,TrEMBL:B9IBT7,TrEMBL:B9RFY2,TrEMBL:D7LHD8;Derives_from=GSCOCT00001009001;Name=Cc11_g15160;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Kinase interacting (KIP1-like) family protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001009001~ Putative Kinase interacting (KIP1-like) family protein~ unknown_gene~ modules;original_location=join(13576..13699%2C14404..14666%2C14868..15191);owner=coffea | |
| 72863 chr11 manual_curation exon 31694290 31694413 . - . Parent=GSCOCT00001009001 | |
| 72864 chr11 manual_curation exon 31693323 31693585 . - . Parent=GSCOCT00001009001 | |
| 72865 chr11 manual_curation exon 31692798 31693121 . - . Parent=GSCOCT00001009001 | |
| 72866 chr11 manual_curation CDS 31694290 31694413 . - 0 Parent=GSCOCT00001009001 | |
| 72867 chr11 manual_curation CDS 31693323 31693585 . - 1 Parent=GSCOCT00001009001 | |
| 72868 chr11 manual_curation CDS 31692798 31693121 . - 0 Parent=GSCOCT00001009001 | |
| 72869 chr11 manual_curation gene 31696705 31703040 . - . ID=GSCOCG00001007001;Name=Cc11_g15170 | |
| 72870 chr11 manual_curation mRNA 31696705 31703040 . - . ID=GSCOCT00001007001;Parent=GSCOCG00001007001;Name=Cc11_g15170 | |
| 72871 chr11 manual_curation polypeptide 31696918 31702592 . - . ID=GSCOCP00001007001;Dbxref=InterPro:IPR001357,InterPro:IPR004274,InterPro:IPR011947,PFAM:PF00533,PFAM:PF03031,PROFILE:PS50172,PROFILE:PS50969,SMART:SM00292,SMART:SM00577,SUPERFAMILY:SSF52113,SwissProt:Q00IB6,SwissProt:Q7TSG2,SwissProt:Q8LL04,TAIR:AT2G04930.1,TAIR:AT2G33540.1,TAIR:AT5G58003.1,TIGRFAMs:TIGR02250,TrEMBL:B9GMR8,TrEMBL:F6HWP9,TrEMBL:Q5MAC2;Derives_from=GSCOCT00001007001;Name=Cc11_g15170;Ontology_term=CC_evidence_code:ISS,GO:0004721,GO:0005622,GO:0005634,CC_EC_number:3.1.3.16,PRODUCT:Putative RNA polymerase II C-terminal domain phosphatase-like 3,CC_functional_completeness:complete,CC_gene:CPL3,CC_gene:CPL4,CC_gene:Ctdp1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001007001~ Putative RNA polymerase II C-terminal domain phosphatase-like 3~ CPL3~ complete;original_location=join(5397..5540%2C5685..5812%2C5945..6196%2C6316..6448%2C6592..6650%2C6750..6807%2C6924..8318%2C8708..9274%2C9410..9556%2C9630..9898%2C9979..10090%2C10177..10434%2C10875..10921%2C11008..11071);owner=coffea | |
| 72872 chr11 manual_curation exon 31696705 31696794 . - . Parent=GSCOCT00001007001 | |
| 72873 chr11 manual_curation exon 31702449 31703040 . - . Parent=GSCOCT00001007001 | |
| 72874 chr11 manual_curation exon 31702177 31702304 . - . Parent=GSCOCT00001007001 | |
| 72875 chr11 manual_curation exon 31701793 31702044 . - . Parent=GSCOCT00001007001 | |
| 72876 chr11 manual_curation exon 31701541 31701673 . - . Parent=GSCOCT00001007001 | |
| 72877 chr11 manual_curation exon 31701339 31701397 . - . Parent=GSCOCT00001007001 | |
| 72878 chr11 manual_curation exon 31701182 31701239 . - . Parent=GSCOCT00001007001 | |
| 72879 chr11 manual_curation exon 31699671 31701065 . - . Parent=GSCOCT00001007001 | |
| 72880 chr11 manual_curation exon 31698715 31699281 . - . Parent=GSCOCT00001007001 | |
| 72881 chr11 manual_curation exon 31698433 31698579 . - . Parent=GSCOCT00001007001 | |
| 72882 chr11 manual_curation exon 31698091 31698359 . - . Parent=GSCOCT00001007001 | |
| 72883 chr11 manual_curation exon 31697899 31698010 . - . Parent=GSCOCT00001007001 | |
| 72884 chr11 manual_curation exon 31697555 31697812 . - . Parent=GSCOCT00001007001 | |
| 72885 chr11 manual_curation exon 31697068 31697114 . - . Parent=GSCOCT00001007001 | |
| 72886 chr11 manual_curation exon 31696890 31696981 . - . Parent=GSCOCT00001007001 | |
| 72887 chr11 manual_curation CDS 31702449 31702592 . - 0 Parent=GSCOCT00001007001 | |
| 72888 chr11 manual_curation CDS 31702177 31702304 . - 0 Parent=GSCOCT00001007001 | |
| 72889 chr11 manual_curation CDS 31701793 31702044 . - 2 Parent=GSCOCT00001007001 | |
| 72890 chr11 manual_curation CDS 31701541 31701673 . - 2 Parent=GSCOCT00001007001 | |
| 72891 chr11 manual_curation CDS 31701339 31701397 . - 0 Parent=GSCOCT00001007001 | |
| 72892 chr11 manual_curation CDS 31701182 31701239 . - 2 Parent=GSCOCT00001007001 | |
| 72893 chr11 manual_curation CDS 31699671 31701065 . - 0 Parent=GSCOCT00001007001 | |
| 72894 chr11 manual_curation CDS 31698715 31699281 . - 0 Parent=GSCOCT00001007001 | |
| 72895 chr11 manual_curation CDS 31698433 31698579 . - 0 Parent=GSCOCT00001007001 | |
| 72896 chr11 manual_curation CDS 31698091 31698359 . - 0 Parent=GSCOCT00001007001 | |
| 72897 chr11 manual_curation CDS 31697899 31698010 . - 2 Parent=GSCOCT00001007001 | |
| 72898 chr11 manual_curation CDS 31697555 31697812 . - 0 Parent=GSCOCT00001007001 | |
| 72899 chr11 manual_curation CDS 31697068 31697114 . - 0 Parent=GSCOCT00001007001 | |
| 72900 chr11 manual_curation CDS 31696918 31696981 . - 2 Parent=GSCOCT00001007001 | |
| 72901 chr11 manual_curation gene 31713267 31715318 . + . ID=GSCOCG00001964001;Name=Cc11_g15180 | |
| 72902 chr11 manual_curation mRNA 31713267 31715318 . + . ID=GSCOCT00001964001;Parent=GSCOCG00001964001;Name=Cc11_g15180 | |
| 72903 chr11 manual_curation polypeptide 31713746 31714417 . + . ID=GSCOCP00001964001;Dbxref=SwissProt:Q94A82,TAIR:AT5G20070.1,TrEMBL:B9SEP1,TrEMBL:F6HH73,TrEMBL:I1KDB2;Derives_from=GSCOCT00001964001;Name=Cc11_g15180;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Nudix hydrolase 19%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:NUDT19;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00001964001~ Nudix hydrolase 19%2C chloroplastic~ NUDT19~ fragment;original_location=join(5658..5721%2C6040..6329);owner=coffea | |
| 72904 chr11 manual_curation exon 31713267 31713809 . + . Parent=GSCOCT00001964001 | |
| 72905 chr11 manual_curation exon 31714128 31715318 . + . Parent=GSCOCT00001964001 | |
| 72906 chr11 manual_curation CDS 31713746 31713809 . + 0 Parent=GSCOCT00001964001 | |
| 72907 chr11 manual_curation CDS 31714128 31714417 . + 1 Parent=GSCOCT00001964001 | |
| 72908 chr11 manual_curation gene 31727004 31729823 . + . ID=GSCOCG00038024001;Name=Cc11_g15190 | |
| 72909 chr11 manual_curation mRNA 31727004 31729823 . + . ID=GSCOCT00038024001;Parent=GSCOCG00038024001;Name=Cc11_g15190 | |
| 72910 chr11 manual_curation polypeptide 31727193 31729066 . + . ID=GSCOCP00038024001;Dbxref=GENE3D:G3DSA:3.40.30.10,InterPro:IPR000866,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR017936,InterPro:IPR017937,PFAM:PF00578,PROFILE:PS51352,PROSITE:PS00194,SUPERFAMILY:SSF52833,SwissProt:O80763,SwissProt:Q7Y0E8,SwissProt:Q7Y0F2,TAIR:AT1G60420.1,TAIR:AT4G31240.1,TrEMBL:A5BVL7,TrEMBL:Q6QUQ2,TrEMBL:Q8GTC2;Derives_from=GSCOCT00038024001;Name=Cc11_g15190;Ontology_term=CC_evidence_code:ISS,GO:0016209,GO:0016491,GO:0045454,CC_EC_number:missing_EC_number,PRODUCT:Putative Probable nucleoredoxin 1,CC_functional_completeness:complete,CC_gene:At1g60420,CC_gene:Os03g0405500,CC_gene:Os03g0405900;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038024001~ Putative Probable nucleoredoxin 1~ At1g60420~ complete;original_location=join(1887..1985%2C2161..2640%2C2768..3247%2C3344..3760);owner=coffea | |
| 72911 chr11 manual_curation exon 31727004 31727291 . + . Parent=GSCOCT00038024001 | |
| 72912 chr11 manual_curation exon 31727467 31727946 . + . Parent=GSCOCT00038024001 | |
| 72913 chr11 manual_curation exon 31728074 31728553 . + . Parent=GSCOCT00038024001 | |
| 72914 chr11 manual_curation exon 31728650 31729823 . + . Parent=GSCOCT00038024001 | |
| 72915 chr11 manual_curation CDS 31727193 31727291 . + 0 Parent=GSCOCT00038024001 | |
| 72916 chr11 manual_curation CDS 31727467 31727946 . + 0 Parent=GSCOCT00038024001 | |
| 72917 chr11 manual_curation CDS 31728074 31728553 . + 0 Parent=GSCOCT00038024001 | |
| 72918 chr11 manual_curation CDS 31728650 31729066 . + 0 Parent=GSCOCT00038024001 | |
| 72919 chr11 manual_curation gene 31730183 31731559 . - . ID=GSCOCG00038025001;Name=Cc11_g15200 | |
| 72920 chr11 manual_curation mRNA 31730183 31731559 . - . ID=GSCOCT00038025001;Parent=GSCOCG00038025001;Name=Cc11_g15200 | |
| 72921 chr11 manual_curation polypeptide 31730183 31731559 . - . ID=GSCOCP00038025001;Dbxref=InterPro:IPR009686,PFAM:PF06911,TAIR:AT2G17840.1,TAIR:AT3G51250.1,TAIR:AT4G35985.1,TrEMBL:B5TV63,TrEMBL:B9H186,TrEMBL:F6I108;Derives_from=GSCOCT00038025001;Name=Cc11_g15200;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Senescence/dehydration-associated protein-related,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038025001~ Senescence/dehydration-associated protein-related~ unknown_gene~ complete;original_location=complement(4877..6253);owner=coffea | |
| 72922 chr11 manual_curation exon 31730183 31731559 . - . Parent=GSCOCT00038025001 | |
| 72923 chr11 manual_curation CDS 31730183 31731559 . - 0 Parent=GSCOCT00038025001 | |
| 72924 chr11 manual_curation gene 31737833 31739166 . + . ID=GSCOCG00038027001;Name=Cc11_g15210 | |
| 72925 chr11 manual_curation mRNA 31737833 31739166 . + . ID=GSCOCT00038027001;Parent=GSCOCG00038027001;Name=Cc11_g15210 | |
| 72926 chr11 manual_curation polypeptide 31737971 31738822 . + . ID=GSCOCP00038027001;Dbxref=InterPro:IPR012442,PFAM:PF07816,TAIR:AT1G23710.1,TAIR:AT1G70420.1,TAIR:AT5G62770.1,TrEMBL:F6GSQ5,TrEMBL:F6HHU1,TrEMBL:O64594;Derives_from=GSCOCT00038027001;Name=Cc11_g15210;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of unknown function (DUF1645),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038027001~ Putative Protein of unknown function (DUF1645)~ unknown_gene~ complete;original_location=12665..13516;owner=coffea | |
| 72927 chr11 manual_curation exon 31737833 31739166 . + . Parent=GSCOCT00038027001 | |
| 72928 chr11 manual_curation CDS 31737971 31738822 . + 0 Parent=GSCOCT00038027001 | |
| 72929 chr11 manual_curation gene 31740715 31744806 . - . ID=GSCOCG00038029001;Name=Cc11_g15220 | |
| 72930 chr11 manual_curation mRNA 31740715 31744806 . - . ID=GSCOCT00038029001;Parent=GSCOCG00038029001;Name=Cc11_g15220 | |
| 72931 chr11 manual_curation polypeptide 31740756 31743658 . - . ID=GSCOCP00038029001;Dbxref=InterPro:IPR000555,PFAM:PF01398,SMART:SM00232,SwissProt:Q5PNU3,SwissProt:Q6NKP9,SwissProt:Q8VYB5,TAIR:AT1G10600.1,TAIR:AT1G48790.1,TAIR:AT4G16144.1,TrEMBL:B9HU66,TrEMBL:B9SHA7,TrEMBL:D7TDF2;Derives_from=GSCOCT00038029001;Name=Cc11_g15220;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:AMSH-like ubiquitin thioesterase 2,CC_functional_completeness:modules,CC_gene:AMSH2,CC_gene:AMSH1,CC_gene:AMSH3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038029001~ AMSH-like ubiquitin thioesterase 2~ AMSH2~ modules;original_location=complement(join(18152..18352%2C17863..17952%2C17402..17464%2C17216..17290%2C16562..16624%2C16117..16169%2C15450..15624));owner=coffea | |
| 72932 chr11 manual_curation exon 31743960 31744042 . - . Parent=GSCOCT00038029001 | |
| 72933 chr11 manual_curation exon 31744765 31744806 . - . Parent=GSCOCT00038029001 | |
| 72934 chr11 manual_curation exon 31740715 31740930 . - . Parent=GSCOCT00038029001 | |
| 72935 chr11 manual_curation exon 31741423 31741475 . - . Parent=GSCOCT00038029001 | |
| 72936 chr11 manual_curation exon 31741868 31741930 . - . Parent=GSCOCT00038029001 | |
| 72937 chr11 manual_curation exon 31742522 31742596 . - . Parent=GSCOCT00038029001 | |
| 72938 chr11 manual_curation exon 31742708 31742770 . - . Parent=GSCOCT00038029001 | |
| 72939 chr11 manual_curation exon 31743169 31743258 . - . Parent=GSCOCT00038029001 | |
| 72940 chr11 manual_curation exon 31743458 31743723 . - . Parent=GSCOCT00038029001 | |
| 72941 chr11 manual_curation CDS 31740756 31740930 . - 2 Parent=GSCOCT00038029001 | |
| 72942 chr11 manual_curation CDS 31741423 31741475 . - 0 Parent=GSCOCT00038029001 | |
| 72943 chr11 manual_curation CDS 31741868 31741930 . - 0 Parent=GSCOCT00038029001 | |
| 72944 chr11 manual_curation CDS 31742522 31742596 . - 0 Parent=GSCOCT00038029001 | |
| 72945 chr11 manual_curation CDS 31742708 31742770 . - 0 Parent=GSCOCT00038029001 | |
| 72946 chr11 manual_curation CDS 31743169 31743258 . - 0 Parent=GSCOCT00038029001 | |
| 72947 chr11 manual_curation CDS 31743458 31743658 . - 0 Parent=GSCOCT00038029001 | |
| 72948 chr11 manual_curation gene 31745351 31751886 . - . ID=GSCOCG00038030001;Name=Cc11_g15230 | |
| 72949 chr11 manual_curation mRNA 31745351 31751886 . - . ID=GSCOCT00038030001;Parent=GSCOCG00038030001;Name=Cc11_g15230 | |
| 72950 chr11 manual_curation polypeptide 31745515 31751709 . - . ID=GSCOCP00038030001;Dbxref=InterPro:IPR004567,InterPro:IPR011602,PFAM:PF03630,SwissProt:O80765,SwissProt:Q4R4U1,SwissProt:Q8L5Y9,TAIR:AT1G60440.1,TAIR:AT4G32180.1,TIGRFAMs:TIGR00555,TrEMBL:B9RB16,TrEMBL:D7TDH2,TrEMBL:Q53U34;Derives_from=GSCOCT00038030001;Name=Cc11_g15230;Ontology_term=CC_evidence_code:ISS,GO:0004594,GO:0005524,GO:0015937,CC_EC_number:2.7.1.33,PRODUCT:Pantothenate kinase 2,CC_functional_completeness:fragment,CC_gene:At4g32180,CC_gene:COAA,CC_gene:PANK4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038030001~ Pantothenate kinase 2~ At4g32180~ fragment;original_location=complement(join(26310..26403%2C25022..25231%2C24241..24287%2C23979..24095%2C23478..23597%2C22776..22870%2C22594..22687%2C21948..22079%2C20649..20761%2C20209..20443));owner=coffea | |
| 72951 chr11 manual_curation exon 31745351 31745749 . - . Parent=GSCOCT00038030001 | |
| 72952 chr11 manual_curation exon 31745955 31746067 . - . Parent=GSCOCT00038030001 | |
| 72953 chr11 manual_curation exon 31747254 31747385 . - . Parent=GSCOCT00038030001 | |
| 72954 chr11 manual_curation exon 31747900 31747993 . - . Parent=GSCOCT00038030001 | |
| 72955 chr11 manual_curation exon 31748082 31748176 . - . Parent=GSCOCT00038030001 | |
| 72956 chr11 manual_curation exon 31748784 31748903 . - . Parent=GSCOCT00038030001 | |
| 72957 chr11 manual_curation exon 31749285 31749401 . - . Parent=GSCOCT00038030001 | |
| 72958 chr11 manual_curation exon 31749547 31749593 . - . Parent=GSCOCT00038030001 | |
| 72959 chr11 manual_curation exon 31750328 31750537 . - . Parent=GSCOCT00038030001 | |
| 72960 chr11 manual_curation exon 31751616 31751886 . - . Parent=GSCOCT00038030001 | |
| 72961 chr11 manual_curation CDS 31745515 31745749 . - 2 Parent=GSCOCT00038030001 | |
| 72962 chr11 manual_curation CDS 31745955 31746067 . - 0 Parent=GSCOCT00038030001 | |
| 72963 chr11 manual_curation CDS 31747254 31747385 . - 0 Parent=GSCOCT00038030001 | |
| 72964 chr11 manual_curation CDS 31747900 31747993 . - 2 Parent=GSCOCT00038030001 | |
| 72965 chr11 manual_curation CDS 31748082 31748176 . - 0 Parent=GSCOCT00038030001 | |
| 72966 chr11 manual_curation CDS 31748784 31748903 . - 0 Parent=GSCOCT00038030001 | |
| 72967 chr11 manual_curation CDS 31749285 31749401 . - 0 Parent=GSCOCT00038030001 | |
| 72968 chr11 manual_curation CDS 31749547 31749593 . - 1 Parent=GSCOCT00038030001 | |
| 72969 chr11 manual_curation CDS 31750328 31750537 . - 1 Parent=GSCOCT00038030001 | |
| 72970 chr11 manual_curation CDS 31751616 31751709 . - 0 Parent=GSCOCT00038030001 | |
| 72971 chr11 manual_curation gene 31753491 31758765 . + . ID=GSCOCG00038031001;Name=Cc11_g15240 | |
| 72972 chr11 manual_curation mRNA 31753491 31758765 . + . ID=GSCOCT00038031001;Parent=GSCOCG00038031001;Name=Cc11_g15240 | |
| 72973 chr11 manual_curation polypeptide 31753491 31758765 . + . ID=GSCOCP00038031001;Dbxref=TAIR:AT1G60460.1,TrEMBL:D7KWU3,TrEMBL:F6HHV3,TrEMBL:G7K1C8;Derives_from=GSCOCT00038031001;Name=Cc11_g15240;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038031001~ Putative unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 6 plant structures%3B EXPRESSED DURING: petal differentiation and expansion stage%2C E expanded cotyledon stage%2C D bilateral stage%3B Has 23 Blast hits to 23 proteins in 8 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 23%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(28185..28220%2C28444..28456%2C28783..28866%2C28999..29025%2C29446..29641%2C30706..30918%2C31536..31614%2C32378..32568%2C32678..32789%2C33157..33459);owner=coffea | |
| 72974 chr11 manual_curation exon 31753491 31753526 . + . Parent=GSCOCT00038031001 | |
| 72975 chr11 manual_curation exon 31753750 31753762 . + . Parent=GSCOCT00038031001 | |
| 72976 chr11 manual_curation exon 31754089 31754172 . + . Parent=GSCOCT00038031001 | |
| 72977 chr11 manual_curation exon 31754305 31754331 . + . Parent=GSCOCT00038031001 | |
| 72978 chr11 manual_curation exon 31754752 31754947 . + . Parent=GSCOCT00038031001 | |
| 72979 chr11 manual_curation exon 31756012 31756224 . + . Parent=GSCOCT00038031001 | |
| 72980 chr11 manual_curation exon 31756842 31756920 . + . Parent=GSCOCT00038031001 | |
| 72981 chr11 manual_curation exon 31757684 31757874 . + . Parent=GSCOCT00038031001 | |
| 72982 chr11 manual_curation exon 31757984 31758095 . + . Parent=GSCOCT00038031001 | |
| 72983 chr11 manual_curation exon 31758463 31758765 . + . Parent=GSCOCT00038031001 | |
| 72984 chr11 manual_curation CDS 31753491 31753526 . + 0 Parent=GSCOCT00038031001 | |
| 72985 chr11 manual_curation CDS 31753750 31753762 . + 0 Parent=GSCOCT00038031001 | |
| 72986 chr11 manual_curation CDS 31754089 31754172 . + 1 Parent=GSCOCT00038031001 | |
| 72987 chr11 manual_curation CDS 31754305 31754331 . + 1 Parent=GSCOCT00038031001 | |
| 72988 chr11 manual_curation CDS 31754752 31754947 . + 1 Parent=GSCOCT00038031001 | |
| 72989 chr11 manual_curation CDS 31756012 31756224 . + 2 Parent=GSCOCT00038031001 | |
| 72990 chr11 manual_curation CDS 31756842 31756920 . + 2 Parent=GSCOCT00038031001 | |
| 72991 chr11 manual_curation CDS 31757684 31757874 . + 0 Parent=GSCOCT00038031001 | |
| 72992 chr11 manual_curation CDS 31757984 31758095 . + 2 Parent=GSCOCT00038031001 | |
| 72993 chr11 manual_curation CDS 31758463 31758765 . + 0 Parent=GSCOCT00038031001 | |
| 72994 chr11 manual_curation gene 31758963 31761452 . - . ID=GSCOCG00038032001;Name=Cc11_g15250 | |
| 72995 chr11 manual_curation mRNA 31758963 31761452 . - . ID=GSCOCT00038032001;Parent=GSCOCG00038032001;Name=Cc11_g15250 | |
| 72996 chr11 manual_curation polypeptide 31759429 31760976 . - . ID=GSCOCP00038032001;Dbxref=InterPro:IPR002495,PFAM:PF01501,TAIR:AT1G56600.1,TAIR:AT1G60470.1,TAIR:AT2G47180.1,TrEMBL:F6HHV4,TrEMBL:Q9XGN4;Derives_from=GSCOCT00038032001;Name=Cc11_g15250;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:galactinol synthase 4,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038032001~ galactinol synthase 4~ unknown_gene~ fragment;original_location=complement(join(35626..35670%2C34713..35033%2C34447..34581%2C34123..34341));owner=coffea | |
| 72997 chr11 manual_curation exon 31758963 31759647 . - . Parent=GSCOCT00038032001 | |
| 72998 chr11 manual_curation exon 31759753 31759887 . - . Parent=GSCOCT00038032001 | |
| 72999 chr11 manual_curation exon 31760019 31760339 . - . Parent=GSCOCT00038032001 | |
| 73000 chr11 manual_curation exon 31760932 31761452 . - . Parent=GSCOCT00038032001 | |
| 73001 chr11 manual_curation CDS 31759429 31759647 . - 0 Parent=GSCOCT00038032001 | |
| 73002 chr11 manual_curation CDS 31759753 31759887 . - 0 Parent=GSCOCT00038032001 | |
| 73003 chr11 manual_curation CDS 31760019 31760339 . - 0 Parent=GSCOCT00038032001 | |
| 73004 chr11 manual_curation CDS 31760932 31760976 . - 0 Parent=GSCOCT00038032001 | |
| 73005 chr11 manual_curation gene 31768694 31772002 . - . ID=GSCOCG00038034001;Name=Cc11_g15260 | |
| 73006 chr11 manual_curation mRNA 31768694 31772002 . - . ID=GSCOCT00038034001;Parent=GSCOCG00038034001;Name=Cc11_g15260 | |
| 73007 chr11 manual_curation polypeptide 31769099 31770968 . - . ID=GSCOCP00038034001;Dbxref=InterPro:IPR003579,InterPro:IPR005225,InterPro:IPR006687,InterPro:IPR006688,InterPro:IPR006689,PANTHER:PTHR11711,PFAM:PF00025,PRINTS:PR00328,SMART:SM00175,SMART:SM00177,SMART:SM00178,TIGRFAMs:TIGR00231,TrEMBL:I1HSQ2;Derives_from=GSCOCT00038034001;Name=Cc11_g15260;Ontology_term=CC_evidence_code:ISS,GO:0005525,GO:0005622,GO:0006886,GO:0007264,GO:0015031,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterized protein,CC_functional_completeness:complete,CC_gene:ARF,CC_gene:Os01g0813400,CC_gene:ARF2-B,CC_gene:ARF2-A,CC_gene:ARF1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038034001~ Uncharacterized protein~ ARF~ complete;original_location=complement(join(45515..45662%2C44888..44958%2C44634..44753%2C44050..44168%2C43793..43961));owner=coffea | |
| 73008 chr11 manual_curation exon 31771950 31772002 . - . Parent=GSCOCT00038034001 | |
| 73009 chr11 manual_curation exon 31768694 31769267 . - . Parent=GSCOCT00038034001 | |
| 73010 chr11 manual_curation exon 31769356 31769474 . - . Parent=GSCOCT00038034001 | |
| 73011 chr11 manual_curation exon 31769940 31770059 . - . Parent=GSCOCT00038034001 | |
| 73012 chr11 manual_curation exon 31770194 31770264 . - . Parent=GSCOCT00038034001 | |
| 73013 chr11 manual_curation exon 31770821 31770990 . - . Parent=GSCOCT00038034001 | |
| 73014 chr11 manual_curation CDS 31769099 31769267 . - 2 Parent=GSCOCT00038034001 | |
| 73015 chr11 manual_curation CDS 31769356 31769474 . - 0 Parent=GSCOCT00038034001 | |
| 73016 chr11 manual_curation CDS 31769940 31770059 . - 0 Parent=GSCOCT00038034001 | |
| 73017 chr11 manual_curation CDS 31770194 31770264 . - 1 Parent=GSCOCT00038034001 | |
| 73018 chr11 manual_curation CDS 31770821 31770968 . - 0 Parent=GSCOCT00038034001 | |
| 73019 chr11 manual_curation gene 31772663 31781046 . - . ID=GSCOCG00038036001;Name=Cc11_g15270 | |
| 73020 chr11 manual_curation mRNA 31772663 31781046 . - . ID=GSCOCT00038036001;Parent=GSCOCG00038036001;Name=Cc11_g15270 | |
| 73021 chr11 manual_curation polypeptide 31772801 31780781 . - . ID=GSCOCP00038036001;Dbxref=GENE3D:G3DSA:1.10.1070.11,GENE3D:G3DSA:1.25.40.70,InterPro:IPR000403,InterPro:IPR001263,InterPro:IPR002420,InterPro:IPR008290,InterPro:IPR008973,InterPro:IPR011009,InterPro:IPR011162,InterPro:IPR015433,InterPro:IPR016024,InterPro:IPR018936,PANTHER:PTHR10048,PFAM:PF00454,PFAM:PF00613,PFAM:PF00792,PIR:PIRSF000587,PROFILE:PS50290,PROSITE:PS00915,PROSITE:PS00916,SMART:SM00142,SMART:SM00145,SMART:SM00146,SUPERFAMILY:SSF48371,SUPERFAMILY:SSF49562,SUPERFAMILY:SSF54452,SUPERFAMILY:SSF56112,SwissProt:P42339,SwissProt:P42347,SwissProt:P42348,TAIR:AT1G49340.2,TAIR:AT1G60490.1,TAIR:AT5G64070.1,TrEMBL:D7TDH7,TrEMBL:I1JV67,TrEMBL:Q4QXM0;Derives_from=GSCOCT00038036001;Name=Cc11_g15270;Ontology_term=CC_evidence_code:ISS,GO:0004428,GO:0005488,GO:0005942,GO:0016303,GO:0046854,GO:0048015,CC_EC_number:2.7.1.137,PRODUCT:Phosphatidylinositol 3-kinase%2C root isoform,CC_functional_completeness:complete,CC_gene:At1g60490;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038036001~ Phosphatidylinositol 3-kinase%2C root isoform~ At1g60490~ complete;original_location=complement(join(55364..55475%2C55039..55138%2C54800..54896%2C54233..54391%2C53903..54112%2C52938..53116%2C52280..52427%2C51609..51704%2C51069..51204%2C50843..50964%2C50266..50460%2C49952..50122%2C49676..49813%2C48901..49055%2C48054..48197%2C47715..47862%2C47495..47632));owner=coffea | |
| 73022 chr11 manual_curation exon 31772663 31772938 . - . Parent=GSCOCT00038036001 | |
| 73023 chr11 manual_curation exon 31773021 31773168 . - . Parent=GSCOCT00038036001 | |
| 73024 chr11 manual_curation exon 31773360 31773503 . - . Parent=GSCOCT00038036001 | |
| 73025 chr11 manual_curation exon 31774207 31774361 . - . Parent=GSCOCT00038036001 | |
| 73026 chr11 manual_curation exon 31774982 31775119 . - . Parent=GSCOCT00038036001 | |
| 73027 chr11 manual_curation exon 31775258 31775428 . - . Parent=GSCOCT00038036001 | |
| 73028 chr11 manual_curation exon 31775572 31775766 . - . Parent=GSCOCT00038036001 | |
| 73029 chr11 manual_curation exon 31776149 31776270 . - . Parent=GSCOCT00038036001 | |
| 73030 chr11 manual_curation exon 31776375 31776510 . - . Parent=GSCOCT00038036001 | |
| 73031 chr11 manual_curation exon 31776915 31777010 . - . Parent=GSCOCT00038036001 | |
| 73032 chr11 manual_curation exon 31777586 31777733 . - . Parent=GSCOCT00038036001 | |
| 73033 chr11 manual_curation exon 31778244 31778422 . - . Parent=GSCOCT00038036001 | |
| 73034 chr11 manual_curation exon 31779209 31779418 . - . Parent=GSCOCT00038036001 | |
| 73035 chr11 manual_curation exon 31779539 31779697 . - . Parent=GSCOCT00038036001 | |
| 73036 chr11 manual_curation exon 31780106 31780202 . - . Parent=GSCOCT00038036001 | |
| 73037 chr11 manual_curation exon 31780345 31780444 . - . Parent=GSCOCT00038036001 | |
| 73038 chr11 manual_curation exon 31780670 31781046 . - . Parent=GSCOCT00038036001 | |
| 73039 chr11 manual_curation CDS 31772801 31772938 . - 0 Parent=GSCOCT00038036001 | |
| 73040 chr11 manual_curation CDS 31773021 31773168 . - 2 Parent=GSCOCT00038036001 | |
| 73041 chr11 manual_curation CDS 31773360 31773503 . - 2 Parent=GSCOCT00038036001 | |
| 73042 chr11 manual_curation CDS 31774207 31774361 . - 0 Parent=GSCOCT00038036001 | |
| 73043 chr11 manual_curation CDS 31774982 31775119 . - 0 Parent=GSCOCT00038036001 | |
| 73044 chr11 manual_curation CDS 31775258 31775428 . - 0 Parent=GSCOCT00038036001 | |
| 73045 chr11 manual_curation CDS 31775572 31775766 . - 0 Parent=GSCOCT00038036001 | |
| 73046 chr11 manual_curation CDS 31776149 31776270 . - 1 Parent=GSCOCT00038036001 | |
| 73047 chr11 manual_curation CDS 31776375 31776510 . - 0 Parent=GSCOCT00038036001 | |
| 73048 chr11 manual_curation CDS 31776915 31777010 . - 0 Parent=GSCOCT00038036001 | |
| 73049 chr11 manual_curation CDS 31777586 31777733 . - 2 Parent=GSCOCT00038036001 | |
| 73050 chr11 manual_curation CDS 31778244 31778422 . - 0 Parent=GSCOCT00038036001 | |
| 73051 chr11 manual_curation CDS 31779209 31779418 . - 0 Parent=GSCOCT00038036001 | |
| 73052 chr11 manual_curation CDS 31779539 31779697 . - 0 Parent=GSCOCT00038036001 | |
| 73053 chr11 manual_curation CDS 31780106 31780202 . - 2 Parent=GSCOCT00038036001 | |
| 73054 chr11 manual_curation CDS 31780345 31780444 . - 1 Parent=GSCOCT00038036001 | |
| 73055 chr11 manual_curation CDS 31780670 31780781 . - 0 Parent=GSCOCT00038036001 | |
| 73056 chr11 manual_curation gene 31781495 31785468 . - . ID=GSCOCG00038037001;Name=Cc11_g15280 | |
| 73057 chr11 manual_curation mRNA 31781495 31785468 . - . ID=GSCOCT00038037001;Parent=GSCOCG00038037001;Name=Cc11_g15280 | |
| 73058 chr11 manual_curation polypeptide 31781730 31785305 . - . ID=GSCOCP00038037001;Dbxref=InterPro:IPR001753,InterPro:IPR010198,InterPro:IPR018376,PFAM:PF00378,PROSITE:PS00166,SwissProt:Q7CQ56,SwissProt:Q8GYN9,SwissProt:Q9CLV5,TAIR:AT1G60550.1,TAIR:AT4G16210.1,TAIR:AT4G16800.1,TIGRFAMs:TIGR01929,TrEMBL:A5B5A4,TrEMBL:B9SH93,TrEMBL:E5GBI7;Derives_from=GSCOCT00038037001;Name=Cc11_g15280;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,GO:0008935,GO:0009234,CC_EC_number:4.1.3.36,PRODUCT:1%2C4-Dihydroxy-2-naphthoyl-CoA synthase%2C peroxisomal,CC_functional_completeness:complete,CC_gene:MENB,CC_gene:menB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038037001~ 1%2C4-Dihydroxy-2-naphthoyl-CoA synthase%2C peroxisomal~ MENB~ complete;original_location=complement(join(59727..59999%2C59093..59215%2C58435..58521%2C58191..58250%2C57989..58087%2C57481..57528%2C57165..57260%2C56795..56917%2C56424..56540));owner=coffea | |
| 73059 chr11 manual_curation exon 31781495 31781846 . - . Parent=GSCOCT00038037001 | |
| 73060 chr11 manual_curation exon 31782101 31782223 . - . Parent=GSCOCT00038037001 | |
| 73061 chr11 manual_curation exon 31782471 31782566 . - . Parent=GSCOCT00038037001 | |
| 73062 chr11 manual_curation exon 31782787 31782834 . - . Parent=GSCOCT00038037001 | |
| 73063 chr11 manual_curation exon 31783295 31783393 . - . Parent=GSCOCT00038037001 | |
| 73064 chr11 manual_curation exon 31783497 31783556 . - . Parent=GSCOCT00038037001 | |
| 73065 chr11 manual_curation exon 31783741 31783827 . - . Parent=GSCOCT00038037001 | |
| 73066 chr11 manual_curation exon 31784399 31784521 . - . Parent=GSCOCT00038037001 | |
| 73067 chr11 manual_curation exon 31785033 31785468 . - . Parent=GSCOCT00038037001 | |
| 73068 chr11 manual_curation CDS 31781730 31781846 . - 0 Parent=GSCOCT00038037001 | |
| 73069 chr11 manual_curation CDS 31782101 31782223 . - 0 Parent=GSCOCT00038037001 | |
| 73070 chr11 manual_curation CDS 31782471 31782566 . - 0 Parent=GSCOCT00038037001 | |
| 73071 chr11 manual_curation CDS 31782787 31782834 . - 0 Parent=GSCOCT00038037001 | |
| 73072 chr11 manual_curation CDS 31783295 31783393 . - 0 Parent=GSCOCT00038037001 | |
| 73073 chr11 manual_curation CDS 31783497 31783556 . - 0 Parent=GSCOCT00038037001 | |
| 73074 chr11 manual_curation CDS 31783741 31783827 . - 0 Parent=GSCOCT00038037001 | |
| 73075 chr11 manual_curation CDS 31784399 31784521 . - 0 Parent=GSCOCT00038037001 | |
| 73076 chr11 manual_curation CDS 31785033 31785305 . - 0 Parent=GSCOCT00038037001 | |
| 73077 chr11 manual_curation gene 31788185 31792619 . - . ID=GSCOCG00038039001;Name=Cc11_g15290 | |
| 73078 chr11 manual_curation mRNA 31788185 31792619 . - . ID=GSCOCT00038039001;Parent=GSCOCG00038039001;Name=Cc11_g15290 | |
| 73079 chr11 manual_curation polypeptide 31788500 31792619 . - . ID=GSCOCP00038039001;Dbxref=GENE3D:G3DSA:2.160.20.10,InterPro:IPR000743,InterPro:IPR006626,InterPro:IPR011050,InterPro:IPR012334,PFAM:PF00295,SMART:SM00710,SUPERFAMILY:SSF51126,SwissProt:P43212,SwissProt:Q949Z1,SwissProt:Q94AJ5,TAIR:AT1G10640.1,TAIR:AT1G60590.1,TAIR:AT5G14650.1,TrEMBL:F6HHV8,TrEMBL:I1KXE1,TrEMBL:I1N1I1;Derives_from=GSCOCT00038039001;Name=Cc11_g15290;Ontology_term=CC_evidence_code:ISS,GO:0004650,GO:0005975,CC_EC_number:3.2.1.67,PRODUCT:Putative Polygalacturonase At1g48100,CC_functional_completeness:modules,CC_gene:At1g48100,CC_gene:At1g80170;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038039001~ Putative Polygalacturonase At1g48100~ At1g48100~ modules;original_location=complement(join(66915..67313%2C65568..65699%2C64941..65168%2C64814..64858%2C64523..64730%2C63795..63985%2C63194..63586));owner=coffea | |
| 73080 chr11 manual_curation exon 31788185 31788892 . - . Parent=GSCOCT00038039001 | |
| 73081 chr11 manual_curation exon 31789101 31789291 . - . Parent=GSCOCT00038039001 | |
| 73082 chr11 manual_curation exon 31789829 31790036 . - . Parent=GSCOCT00038039001 | |
| 73083 chr11 manual_curation exon 31790120 31790164 . - . Parent=GSCOCT00038039001 | |
| 73084 chr11 manual_curation exon 31790247 31790474 . - . Parent=GSCOCT00038039001 | |
| 73085 chr11 manual_curation exon 31790874 31791005 . - . Parent=GSCOCT00038039001 | |
| 73086 chr11 manual_curation exon 31792221 31792619 . - . Parent=GSCOCT00038039001 | |
| 73087 chr11 manual_curation CDS 31788500 31788892 . - 0 Parent=GSCOCT00038039001 | |
| 73088 chr11 manual_curation CDS 31789101 31789291 . - 1 Parent=GSCOCT00038039001 | |
| 73089 chr11 manual_curation CDS 31789829 31790036 . - 0 Parent=GSCOCT00038039001 | |
| 73090 chr11 manual_curation CDS 31790120 31790164 . - 0 Parent=GSCOCT00038039001 | |
| 73091 chr11 manual_curation CDS 31790247 31790474 . - 0 Parent=GSCOCT00038039001 | |
| 73092 chr11 manual_curation CDS 31790874 31791005 . - 0 Parent=GSCOCT00038039001 | |
| 73093 chr11 manual_curation CDS 31792221 31792619 . - 0 Parent=GSCOCT00038039001 | |
| 73094 chr11 manual_curation gene 31799221 31803038 . - . ID=GSCOCG00038040001;Name=Cc11_g15300 | |
| 73095 chr11 manual_curation mRNA 31799221 31803038 . - . ID=GSCOCT00038040001;Parent=GSCOCG00038040001;Name=Cc11_g15300 | |
| 73096 chr11 manual_curation polypeptide 31799467 31803038 . - . ID=GSCOCP00038040001;Dbxref=GENE3D:G3DSA:2.160.20.10,InterPro:IPR000743,InterPro:IPR011050,InterPro:IPR012334,PFAM:PF00295,SUPERFAMILY:SSF51126,SwissProt:P35336,SwissProt:Q7M1E7,SwissProt:Q94AJ5,TAIR:AT1G23460.1,TAIR:AT1G70500.1,TAIR:AT1G80170.1,TrEMBL:B9I0Y7,TrEMBL:B9N010,TrEMBL:F6HHV9;Derives_from=GSCOCT00038040001;Name=Cc11_g15300;Ontology_term=CC_evidence_code:ISS,GO:0004650,GO:0005975,CC_EC_number:3.2.1.67,PRODUCT:Putative Probable polygalacturonase At1g80170,CC_functional_completeness:complete,CC_gene:At1g80170;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038040001~ Putative Probable polygalacturonase At1g80170~ At1g80170~ complete;original_location=complement(join(77478..77732%2C76776..76904%2C76385..76555%2C76273..76293%2C75966..76173%2C75505..75586%2C75221..75329%2C74662..74778%2C74161..74466));owner=coffea | |
| 73097 chr11 manual_curation exon 31799221 31799772 . - . Parent=GSCOCT00038040001 | |
| 73098 chr11 manual_curation exon 31799968 31800084 . - . Parent=GSCOCT00038040001 | |
| 73099 chr11 manual_curation exon 31800527 31800635 . - . Parent=GSCOCT00038040001 | |
| 73100 chr11 manual_curation exon 31800811 31800892 . - . Parent=GSCOCT00038040001 | |
| 73101 chr11 manual_curation exon 31801272 31801479 . - . Parent=GSCOCT00038040001 | |
| 73102 chr11 manual_curation exon 31801579 31801599 . - . Parent=GSCOCT00038040001 | |
| 73103 chr11 manual_curation exon 31801691 31801861 . - . Parent=GSCOCT00038040001 | |
| 73104 chr11 manual_curation exon 31802082 31802210 . - . Parent=GSCOCT00038040001 | |
| 73105 chr11 manual_curation exon 31802784 31803038 . - . Parent=GSCOCT00038040001 | |
| 73106 chr11 manual_curation CDS 31799467 31799772 . - 0 Parent=GSCOCT00038040001 | |
| 73107 chr11 manual_curation CDS 31799968 31800084 . - 0 Parent=GSCOCT00038040001 | |
| 73108 chr11 manual_curation CDS 31800527 31800635 . - 2 Parent=GSCOCT00038040001 | |
| 73109 chr11 manual_curation CDS 31800811 31800892 . - 1 Parent=GSCOCT00038040001 | |
| 73110 chr11 manual_curation CDS 31801272 31801479 . - 0 Parent=GSCOCT00038040001 | |
| 73111 chr11 manual_curation CDS 31801579 31801599 . - 0 Parent=GSCOCT00038040001 | |
| 73112 chr11 manual_curation CDS 31801691 31801861 . - 0 Parent=GSCOCT00038040001 | |
| 73113 chr11 manual_curation CDS 31802082 31802210 . - 0 Parent=GSCOCT00038040001 | |
| 73114 chr11 manual_curation CDS 31802784 31803038 . - 0 Parent=GSCOCT00038040001 | |
| 73115 chr11 manual_curation gene 31803947 31807021 . - . ID=GSCOCG00038041001;Name=Cc11_g15310 | |
| 73116 chr11 manual_curation mRNA 31803947 31807021 . - . ID=GSCOCT00038041001;Parent=GSCOCG00038041001;Name=Cc11_g15310 | |
| 73117 chr11 manual_curation polypeptide 31804306 31806031 . - . ID=GSCOCP00038041001;Dbxref=GENE3D:G3DSA:3.40.630.20,InterPro:IPR000816,InterPro:IPR016125,PANTHER:PTHR23402,PFAM:PF01470,PIR:PIRSF015592,SUPERFAMILY:SSF53182,SwissProt:B5XZE0,SwissProt:O58321,SwissProt:O73944,TAIR:AT1G23440.1,TAIR:AT1G56700.1,TrEMBL:A5BWV3,TrEMBL:C6TEW2,TrEMBL:I1N1I2;Derives_from=GSCOCT00038041001;Name=Cc11_g15310;Ontology_term=CC_evidence_code:ISS,GO:0006508,CC_EC_number:3.4.19.3,PRODUCT:Putative Pyrrolidone-carboxylate peptidase,CC_functional_completeness:fragment,CC_gene:pcp;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038041001~ Putative Pyrrolidone-carboxylate peptidase~ pcp~ fragment;original_location=complement(join(80462..80725%2C80115..80219%2C79990..80037%2C79000..79239));owner=coffea | |
| 73118 chr11 manual_curation exon 31806845 31807021 . - . Parent=GSCOCT00038041001 | |
| 73119 chr11 manual_curation exon 31803947 31804545 . - . Parent=GSCOCT00038041001 | |
| 73120 chr11 manual_curation exon 31805296 31805343 . - . Parent=GSCOCT00038041001 | |
| 73121 chr11 manual_curation exon 31805421 31805525 . - . Parent=GSCOCT00038041001 | |
| 73122 chr11 manual_curation exon 31805768 31806080 . - . Parent=GSCOCT00038041001 | |
| 73123 chr11 manual_curation CDS 31804306 31804545 . - 0 Parent=GSCOCT00038041001 | |
| 73124 chr11 manual_curation CDS 31805296 31805343 . - 0 Parent=GSCOCT00038041001 | |
| 73125 chr11 manual_curation CDS 31805421 31805525 . - 0 Parent=GSCOCT00038041001 | |
| 73126 chr11 manual_curation CDS 31805768 31806031 . - 0 Parent=GSCOCT00038041001 | |
| 73127 chr11 manual_curation gene 31809352 31814616 . + . ID=GSCOCG00038042001;Name=Cc11_g15320 | |
| 73128 chr11 manual_curation mRNA 31809352 31814616 . + . ID=GSCOCT00038042001;Parent=GSCOCG00038042001;Name=Cc11_g15320 | |
| 73129 chr11 manual_curation polypeptide 31810504 31814616 . + . ID=GSCOCP00038042001;Dbxref=InterPro:IPR001525,InterPro:IPR009060,InterPro:IPR015940,PFAM:PF00145,PROFILE:PS50030,SUPERFAMILY:SSF46934,SwissProt:Q4W5Z4,SwissProt:Q9LXE5,SwissProt:Q9M548,TAIR:AT3G17310.2,TAIR:AT5G14620.1,TAIR:AT5G15380.1,TrEMBL:B1GYI2,TrEMBL:G1CQN7,TrEMBL:I1K1I2;Derives_from=GSCOCT00038042001;Name=Cc11_g15320;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0006306,CC_EC_number:2.1.1.37,PRODUCT:DNA (cytosine-5)-methyltransferase DRM2,CC_functional_completeness:complete,CC_gene:DRM2,CC_gene:DRM1,CC_gene:DNMT3A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038042001~ DNA (cytosine-5)-methyltransferase DRM2~ DRM2~ complete;original_location=join(85198..85410%2C85845..85958%2C86225..86324%2C86408..86451%2C87127..87237%2C87479..87578%2C87831..87915%2C88078..88786%2C88879..89310);owner=coffea | |
| 73130 chr11 manual_curation exon 31809352 31810716 . + . Parent=GSCOCT00038042001 | |
| 73131 chr11 manual_curation exon 31811151 31811264 . + . Parent=GSCOCT00038042001 | |
| 73132 chr11 manual_curation exon 31811531 31811630 . + . Parent=GSCOCT00038042001 | |
| 73133 chr11 manual_curation exon 31811714 31811757 . + . Parent=GSCOCT00038042001 | |
| 73134 chr11 manual_curation exon 31812433 31812543 . + . Parent=GSCOCT00038042001 | |
| 73135 chr11 manual_curation exon 31812785 31812884 . + . Parent=GSCOCT00038042001 | |
| 73136 chr11 manual_curation exon 31813137 31813221 . + . Parent=GSCOCT00038042001 | |
| 73137 chr11 manual_curation exon 31813384 31814092 . + . Parent=GSCOCT00038042001 | |
| 73138 chr11 manual_curation exon 31814185 31814616 . + . Parent=GSCOCT00038042001 | |
| 73139 chr11 manual_curation CDS 31810504 31810716 . + 0 Parent=GSCOCT00038042001 | |
| 73140 chr11 manual_curation CDS 31811151 31811264 . + 0 Parent=GSCOCT00038042001 | |
| 73141 chr11 manual_curation CDS 31811531 31811630 . + 0 Parent=GSCOCT00038042001 | |
| 73142 chr11 manual_curation CDS 31811714 31811757 . + 1 Parent=GSCOCT00038042001 | |
| 73143 chr11 manual_curation CDS 31812433 31812543 . + 0 Parent=GSCOCT00038042001 | |
| 73144 chr11 manual_curation CDS 31812785 31812884 . + 0 Parent=GSCOCT00038042001 | |
| 73145 chr11 manual_curation CDS 31813137 31813221 . + 1 Parent=GSCOCT00038042001 | |
| 73146 chr11 manual_curation CDS 31813384 31814092 . + 2 Parent=GSCOCT00038042001 | |
| 73147 chr11 manual_curation CDS 31814185 31814616 . + 0 Parent=GSCOCT00038042001 | |
| 73148 chr11 manual_curation gene 31815650 31820195 . - . ID=GSCOCG00038043001;Name=Cc11_g15330 | |
| 73149 chr11 manual_curation mRNA 31815650 31820195 . - . ID=GSCOCT00038043001;Parent=GSCOCG00038043001;Name=Cc11_g15330 | |
| 73150 chr11 manual_curation polypeptide 31815881 31818993 . - . ID=GSCOCP00038043001;Dbxref=InterPro:IPR001841,InterPro:IPR017066,PIR:PIRSF036836,PROFILE:PS50089,TAIR:AT1G10650.1,TAIR:AT1G45976.1,TAIR:AT1G60610.1,TrEMBL:B9HU58,TrEMBL:I1J580,TrEMBL:I1JC37;Derives_from=GSCOCT00038043001;Name=Cc11_g15330;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:SBP (S-ribonuclease binding protein) family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038043001~ SBP (S-ribonuclease binding protein) family protein~ unknown_gene~ complete;original_location=complement(join(93582..93687%2C91939..92300%2C90575..91111));owner=coffea | |
| 73151 chr11 manual_curation exon 31819744 31819800 . - . Parent=GSCOCT00038043001 | |
| 73152 chr11 manual_curation exon 31819898 31820195 . - . Parent=GSCOCT00038043001 | |
| 73153 chr11 manual_curation exon 31815650 31816417 . - . Parent=GSCOCT00038043001 | |
| 73154 chr11 manual_curation exon 31817245 31817606 . - . Parent=GSCOCT00038043001 | |
| 73155 chr11 manual_curation exon 31818888 31819069 . - . Parent=GSCOCT00038043001 | |
| 73156 chr11 manual_curation CDS 31815881 31816417 . - 0 Parent=GSCOCT00038043001 | |
| 73157 chr11 manual_curation CDS 31817245 31817606 . - 1 Parent=GSCOCT00038043001 | |
| 73158 chr11 manual_curation CDS 31818888 31818993 . - 0 Parent=GSCOCT00038043001 | |
| 73159 chr11 manual_curation gene 31826860 31828489 . + . ID=GSCOCG00038044001;Name=Cc11_g15340 | |
| 73160 chr11 manual_curation mRNA 31826860 31828489 . + . ID=GSCOCT00038044001;Parent=GSCOCG00038044001;Name=Cc11_g15340 | |
| 73161 chr11 manual_curation polypeptide 31827003 31828151 . + . ID=GSCOCP00038044001;Dbxref=InterPro:IPR006476,PFAM:PF09713,TAIR:AT1G10657.1,TAIR:AT3G55240.1,TAIR:AT5G02580.1,TIGRFAMs:TIGR01589,TrEMBL:C6SY51,TrEMBL:D7TDI6,TrEMBL:I1KXD5;Derives_from=GSCOCT00038044001;Name=Cc11_g15340;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Plant protein 1589 of unknown function,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038044001~ Putative Plant protein 1589 of unknown function~ unknown_gene~ complete;original_location=join(101697..101759%2C102010..102115%2C102558..102635%2C102793..102845);owner=coffea | |
| 73162 chr11 manual_curation exon 31826860 31827065 . + . Parent=GSCOCT00038044001 | |
| 73163 chr11 manual_curation exon 31827316 31827421 . + . Parent=GSCOCT00038044001 | |
| 73164 chr11 manual_curation exon 31827864 31827941 . + . Parent=GSCOCT00038044001 | |
| 73165 chr11 manual_curation exon 31828099 31828489 . + . Parent=GSCOCT00038044001 | |
| 73166 chr11 manual_curation CDS 31827003 31827065 . + 0 Parent=GSCOCT00038044001 | |
| 73167 chr11 manual_curation CDS 31827316 31827421 . + 0 Parent=GSCOCT00038044001 | |
| 73168 chr11 manual_curation CDS 31827864 31827941 . + 1 Parent=GSCOCT00038044001 | |
| 73169 chr11 manual_curation CDS 31828099 31828151 . + 1 Parent=GSCOCT00038044001 | |
| 73170 chr11 manual_curation gene 31829374 31830258 . - . ID=GSCOCG00038045001;Name=Cc11_g15350 | |
| 73171 chr11 manual_curation mRNA 31829374 31830258 . - . ID=GSCOCT00038045001;Parent=GSCOCG00038045001;Name=Cc11_g15350 | |
| 73172 chr11 manual_curation polypeptide 31829374 31830258 . - . ID=GSCOCP00038045001;Dbxref=InterPro:IPR006780,PFAM:PF04690,SwissProt:O22152,SwissProt:Q8GW46,SwissProt:Q9LDT3,TAIR:AT1G23420.1,TAIR:AT2G26580.1,TAIR:AT2G45190.1,TrEMBL:D7KNF6,TrEMBL:D7TDI7,TrEMBL:I1N1I3;Derives_from=GSCOCT00038045001;Name=Cc11_g15350;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Axial regulator YABBY 4,CC_functional_completeness:fragment,CC_gene:YAB4,CC_gene:YAB5,CC_gene:YAB1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038045001~ Axial regulator YABBY 4~ YAB4~ fragment;original_location=complement(join(104872..104952%2C104648..104785%2C104437..104569%2C104277..104325%2C104068..104182));owner=coffea | |
| 73173 chr11 manual_curation exon 31829374 31829488 . - . Parent=GSCOCT00038045001 | |
| 73174 chr11 manual_curation exon 31829583 31829631 . - . Parent=GSCOCT00038045001 | |
| 73175 chr11 manual_curation exon 31829743 31829875 . - . Parent=GSCOCT00038045001 | |
| 73176 chr11 manual_curation exon 31829954 31830091 . - . Parent=GSCOCT00038045001 | |
| 73177 chr11 manual_curation exon 31830178 31830258 . - . Parent=GSCOCT00038045001 | |
| 73178 chr11 manual_curation CDS 31829374 31829488 . - 2 Parent=GSCOCT00038045001 | |
| 73179 chr11 manual_curation CDS 31829583 31829631 . - 1 Parent=GSCOCT00038045001 | |
| 73180 chr11 manual_curation CDS 31829743 31829875 . - 0 Parent=GSCOCT00038045001 | |
| 73181 chr11 manual_curation CDS 31829954 31830091 . - 0 Parent=GSCOCT00038045001 | |
| 73182 chr11 manual_curation CDS 31830178 31830258 . - 0 Parent=GSCOCT00038045001 | |
| 73183 chr11 manual_curation gene 31832384 31836410 . + . ID=GSCOCG00038046001;Name=Cc11_g15360 | |
| 73184 chr11 manual_curation mRNA 31832384 31836410 . + . ID=GSCOCT00038046001;Parent=GSCOCG00038046001;Name=Cc11_g15360 | |
| 73185 chr11 manual_curation polypeptide 31832961 31836318 . + . ID=GSCOCP00038046001;Dbxref=GENE3D:G3DSA:3.30.110.60,InterPro:IPR001890,PFAM:PF01985,PROFILE:PS51295,SUPERFAMILY:SSF75471,SwissProt:Q657G7,SwissProt:Q84N48,SwissProt:Q9LDA9,TAIR:AT1G23400.1,TAIR:AT2G20020.1,TAIR:AT4G31010.1,TrEMBL:B9HTW6,TrEMBL:D7TDH9,TrEMBL:E5GBI3;Derives_from=GSCOCT00038046001;Name=Cc11_g15360;Ontology_term=CC_evidence_code:ISS,GO:0003723,CC_EC_number:missing_EC_number,PRODUCT:CRS2-associated factor 2%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:CAF2,CC_gene:At1g23400,CC_gene:Os01g0323300;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038046001~ CRS2-associated factor 2%2C chloroplastic~ CAF2~ fragment;original_location=join(107655..107907%2C108328..108455%2C108601..108826%2C109265..109392%2C109852..109996%2C110624..111012);owner=coffea | |
| 73186 chr11 manual_curation exon 31832384 31833213 . + . Parent=GSCOCT00038046001 | |
| 73187 chr11 manual_curation exon 31833634 31833761 . + . Parent=GSCOCT00038046001 | |
| 73188 chr11 manual_curation exon 31833907 31834132 . + . Parent=GSCOCT00038046001 | |
| 73189 chr11 manual_curation exon 31834571 31834698 . + . Parent=GSCOCT00038046001 | |
| 73190 chr11 manual_curation exon 31835158 31835302 . + . Parent=GSCOCT00038046001 | |
| 73191 chr11 manual_curation exon 31835930 31836410 . + . Parent=GSCOCT00038046001 | |
| 73192 chr11 manual_curation CDS 31832961 31833213 . + 0 Parent=GSCOCT00038046001 | |
| 73193 chr11 manual_curation CDS 31833634 31833761 . + 1 Parent=GSCOCT00038046001 | |
| 73194 chr11 manual_curation CDS 31833907 31834132 . + 0 Parent=GSCOCT00038046001 | |
| 73195 chr11 manual_curation CDS 31834571 31834698 . + 1 Parent=GSCOCT00038046001 | |
| 73196 chr11 manual_curation CDS 31835158 31835302 . + 0 Parent=GSCOCT00038046001 | |
| 73197 chr11 manual_curation CDS 31835930 31836318 . + 1 Parent=GSCOCT00038046001 | |
| 73198 chr11 manual_curation gene 31838314 31842366 . + . ID=GSCOCG00038047001;Name=Cc11_g15370 | |
| 73199 chr11 manual_curation mRNA 31838314 31842366 . + . ID=GSCOCT00038047001;Parent=GSCOCG00038047001;Name=Cc11_g15370 | |
| 73200 chr11 manual_curation polypeptide 31838771 31841777 . + . ID=GSCOCP00038047001;Dbxref=TAIR:AT1G10660.2,TAIR:AT3G27770.1,TAIR:AT5G62960.1,TrEMBL:B9HTW5,TrEMBL:G7K078,TrEMBL:I1J576;Derives_from=GSCOCT00038047001;Name=Cc11_g15370;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B LOCATED IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038047001~ unknown protein%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62960.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(113465..113787%2C114130..114163%2C114503..114728%2C115425..115492%2C115766..115831%2C115947..116038%2C116165..116212%2C116357..116471);owner=coffea | |
| 73201 chr11 manual_curation exon 31838314 31839093 . + . Parent=GSCOCT00038047001 | |
| 73202 chr11 manual_curation exon 31839436 31839469 . + . Parent=GSCOCT00038047001 | |
| 73203 chr11 manual_curation exon 31839809 31840034 . + . Parent=GSCOCT00038047001 | |
| 73204 chr11 manual_curation exon 31840731 31840798 . + . Parent=GSCOCT00038047001 | |
| 73205 chr11 manual_curation exon 31841072 31841137 . + . Parent=GSCOCT00038047001 | |
| 73206 chr11 manual_curation exon 31841253 31841344 . + . Parent=GSCOCT00038047001 | |
| 73207 chr11 manual_curation exon 31841471 31841518 . + . Parent=GSCOCT00038047001 | |
| 73208 chr11 manual_curation exon 31841663 31842366 . + . Parent=GSCOCT00038047001 | |
| 73209 chr11 manual_curation CDS 31838771 31839093 . + 0 Parent=GSCOCT00038047001 | |
| 73210 chr11 manual_curation CDS 31839436 31839469 . + 2 Parent=GSCOCT00038047001 | |
| 73211 chr11 manual_curation CDS 31839809 31840034 . + 0 Parent=GSCOCT00038047001 | |
| 73212 chr11 manual_curation CDS 31840731 31840798 . + 1 Parent=GSCOCT00038047001 | |
| 73213 chr11 manual_curation CDS 31841072 31841137 . + 0 Parent=GSCOCT00038047001 | |
| 73214 chr11 manual_curation CDS 31841253 31841344 . + 0 Parent=GSCOCT00038047001 | |
| 73215 chr11 manual_curation CDS 31841471 31841518 . + 2 Parent=GSCOCT00038047001 | |
| 73216 chr11 manual_curation CDS 31841663 31841777 . + 2 Parent=GSCOCT00038047001 | |
| 73217 chr11 manual_curation gene 31846618 31850872 . + . ID=GSCOCG00038048001;Name=Cc11_g15380 | |
| 73218 chr11 manual_curation mRNA 31846618 31850872 . + . ID=GSCOCT00038048001;Parent=GSCOCG00038048001;Name=Cc11_g15380 | |
| 73219 chr11 manual_curation polypeptide 31846901 31850448 . + . ID=GSCOCP00038048001;Dbxref=GENE3D:G3DSA:3.30.470.20,InterPro:IPR013650,InterPro:IPR013816,InterPro:IPR016102,PFAM:PF08442,SUPERFAMILY:SSF52210,SwissProt:O22718,SwissProt:Q2QNG7,SwissProt:Q9SGY2,TAIR:AT1G09430.1,TAIR:AT1G10670.3,TAIR:AT1G60810.1,TrEMBL:A5BR03,TrEMBL:B9HLS7,TrEMBL:B9SHC9;Derives_from=GSCOCT00038048001;Name=Cc11_g15380;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005524,CC_EC_number:6.2.1.5,PRODUCT:ATP-citrate synthase alpha chain protein 1,CC_functional_completeness:complete,CC_gene:ACLA-1,CC_gene:ACLA-2,CC_gene:ACLA-3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038048001~ ATP-citrate synthase alpha chain protein 1~ ACLA-1~ complete;original_location=join(121595..121693%2C122623..122799%2C122953..123114%2C123229..123309%2C123532..123583%2C123678..123792%2C123903..123984%2C124226..124321%2C124414..124515%2C124638..124754%2C124839..124955%2C125071..125142);owner=coffea | |
| 73220 chr11 manual_curation exon 31846618 31846680 . + . Parent=GSCOCT00038048001 | |
| 73221 chr11 manual_curation exon 31846832 31846999 . + . Parent=GSCOCT00038048001 | |
| 73222 chr11 manual_curation exon 31847929 31848105 . + . Parent=GSCOCT00038048001 | |
| 73223 chr11 manual_curation exon 31848259 31848420 . + . Parent=GSCOCT00038048001 | |
| 73224 chr11 manual_curation exon 31848535 31848615 . + . Parent=GSCOCT00038048001 | |
| 73225 chr11 manual_curation exon 31848838 31848889 . + . Parent=GSCOCT00038048001 | |
| 73226 chr11 manual_curation exon 31848984 31849098 . + . Parent=GSCOCT00038048001 | |
| 73227 chr11 manual_curation exon 31849209 31849290 . + . Parent=GSCOCT00038048001 | |
| 73228 chr11 manual_curation exon 31849532 31849627 . + . Parent=GSCOCT00038048001 | |
| 73229 chr11 manual_curation exon 31849720 31849821 . + . Parent=GSCOCT00038048001 | |
| 73230 chr11 manual_curation exon 31849944 31850060 . + . Parent=GSCOCT00038048001 | |
| 73231 chr11 manual_curation exon 31850145 31850261 . + . Parent=GSCOCT00038048001 | |
| 73232 chr11 manual_curation exon 31850377 31850872 . + . Parent=GSCOCT00038048001 | |
| 73233 chr11 manual_curation CDS 31846901 31846999 . + 0 Parent=GSCOCT00038048001 | |
| 73234 chr11 manual_curation CDS 31847929 31848105 . + 0 Parent=GSCOCT00038048001 | |
| 73235 chr11 manual_curation CDS 31848259 31848420 . + 0 Parent=GSCOCT00038048001 | |
| 73236 chr11 manual_curation CDS 31848535 31848615 . + 0 Parent=GSCOCT00038048001 | |
| 73237 chr11 manual_curation CDS 31848838 31848889 . + 0 Parent=GSCOCT00038048001 | |
| 73238 chr11 manual_curation CDS 31848984 31849098 . + 1 Parent=GSCOCT00038048001 | |
| 73239 chr11 manual_curation CDS 31849209 31849290 . + 2 Parent=GSCOCT00038048001 | |
| 73240 chr11 manual_curation CDS 31849532 31849627 . + 0 Parent=GSCOCT00038048001 | |
| 73241 chr11 manual_curation CDS 31849720 31849821 . + 0 Parent=GSCOCT00038048001 | |
| 73242 chr11 manual_curation CDS 31849944 31850060 . + 0 Parent=GSCOCT00038048001 | |
| 73243 chr11 manual_curation CDS 31850145 31850261 . + 0 Parent=GSCOCT00038048001 | |
| 73244 chr11 manual_curation CDS 31850377 31850448 . + 0 Parent=GSCOCT00038048001 | |
| 73245 chr11 manual_curation gene 31855032 31856518 . + . ID=GSCOCG00038049001;Name=Cc11_g15390 | |
| 73246 chr11 manual_curation mRNA 31855032 31856518 . + . ID=GSCOCT00038049001;Parent=GSCOCG00038049001;Name=Cc11_g15390 | |
| 73247 chr11 manual_curation polypeptide 31855032 31856177 . + . ID=GSCOCP00038049001;Dbxref=GENE3D:G3DSA:2.120.10.80,InterPro:IPR011043,InterPro:IPR015915,SUPERFAMILY:SSF50965,SwissProt:Q3EB08,SwissProt:Q9LDE3,TAIR:AT1G23390.1,TAIR:AT3G24760.1,TrEMBL:A5BR02,TrEMBL:D0ENL6,TrEMBL:F6HHS4;Derives_from=GSCOCT00038049001;Name=Cc11_g15390;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative F-box/kelch-repeat protein At1g23390,CC_functional_completeness:complete,CC_gene:At1g23390,CC_gene:At3g24760;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038049001~ Putative F-box/kelch-repeat protein At1g23390~ At1g23390~ complete;original_location=129726..130871;owner=coffea | |
| 73248 chr11 manual_curation exon 31855032 31856518 . + . Parent=GSCOCT00038049001 | |
| 73249 chr11 manual_curation CDS 31855032 31856177 . + 0 Parent=GSCOCT00038049001 | |
| 73250 chr11 manual_curation gene 31862574 31867779 . + . ID=GSCOCG00038050001;Name=Cc11_g15400 | |
| 73251 chr11 manual_curation mRNA 31862574 31867779 . + . ID=GSCOCT00038050001;Parent=GSCOCG00038050001;Name=Cc11_g15400 | |
| 73252 chr11 manual_curation polypeptide 31863281 31867385 . + . ID=GSCOCP00038050001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q8RY65,SwissProt:Q93ZS4,SwissProt:Q9LFS4,TAIR:AT1G60800.1,TAIR:AT3G25560.3,TAIR:AT5G16000.1,TrEMBL:A5C185,TrEMBL:D7TDJ5,TrEMBL:Q75UP2;Derives_from=GSCOCT00038050001;Name=Cc11_g15400;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.10.2,PRODUCT:Protein NSP-INTERACTING KINASE 3,CC_functional_completeness:complete,CC_gene:NIK3,CC_gene:NIK1,CC_gene:NIK2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038050001~ Protein NSP-INTERACTING KINASE 3~ NIK3~ complete;original_location=join(137975..138077%2C138379..138511%2C138594..138665%2C138852..138995%2C139106..139177%2C139300..139359%2C139441..139538%2C139657..139797%2C140274..140615%2C141001..141392%2C141762..142079);owner=coffea | |
| 73253 chr11 manual_curation exon 31862574 31863383 . + . Parent=GSCOCT00038050001 | |
| 73254 chr11 manual_curation exon 31863685 31863817 . + . Parent=GSCOCT00038050001 | |
| 73255 chr11 manual_curation exon 31863900 31863971 . + . Parent=GSCOCT00038050001 | |
| 73256 chr11 manual_curation exon 31864158 31864301 . + . Parent=GSCOCT00038050001 | |
| 73257 chr11 manual_curation exon 31864412 31864483 . + . Parent=GSCOCT00038050001 | |
| 73258 chr11 manual_curation exon 31864606 31864665 . + . Parent=GSCOCT00038050001 | |
| 73259 chr11 manual_curation exon 31864747 31864844 . + . Parent=GSCOCT00038050001 | |
| 73260 chr11 manual_curation exon 31864963 31865103 . + . Parent=GSCOCT00038050001 | |
| 73261 chr11 manual_curation exon 31865580 31865921 . + . Parent=GSCOCT00038050001 | |
| 73262 chr11 manual_curation exon 31866307 31866698 . + . Parent=GSCOCT00038050001 | |
| 73263 chr11 manual_curation exon 31867068 31867779 . + . Parent=GSCOCT00038050001 | |
| 73264 chr11 manual_curation CDS 31863281 31863383 . + 0 Parent=GSCOCT00038050001 | |
| 73265 chr11 manual_curation CDS 31863685 31863817 . + 1 Parent=GSCOCT00038050001 | |
| 73266 chr11 manual_curation CDS 31863900 31863971 . + 2 Parent=GSCOCT00038050001 | |
| 73267 chr11 manual_curation CDS 31864158 31864301 . + 2 Parent=GSCOCT00038050001 | |
| 73268 chr11 manual_curation CDS 31864412 31864483 . + 2 Parent=GSCOCT00038050001 | |
| 73269 chr11 manual_curation CDS 31864606 31864665 . + 2 Parent=GSCOCT00038050001 | |
| 73270 chr11 manual_curation CDS 31864747 31864844 . + 2 Parent=GSCOCT00038050001 | |
| 73271 chr11 manual_curation CDS 31864963 31865103 . + 1 Parent=GSCOCT00038050001 | |
| 73272 chr11 manual_curation CDS 31865580 31865921 . + 1 Parent=GSCOCT00038050001 | |
| 73273 chr11 manual_curation CDS 31866307 31866698 . + 1 Parent=GSCOCT00038050001 | |
| 73274 chr11 manual_curation CDS 31867068 31867385 . + 0 Parent=GSCOCT00038050001 | |
| 73275 chr11 manual_curation gene 31869600 31873911 . + . ID=GSCOCG00038051001;Name=Cc11_g15410 | |
| 73276 chr11 manual_curation mRNA 31869600 31873911 . + . ID=GSCOCT00038051001;Parent=GSCOCG00038051001;Name=Cc11_g15410 | |
| 73277 chr11 manual_curation polypeptide 31869971 31873625 . + . ID=GSCOCP00038051001;Dbxref=InterPro:IPR004253,PFAM:PF03005,TAIR:AT1G60790.1,TAIR:AT3G12060.1,TAIR:AT5G06700.1,TrEMBL:B9SHD2,TrEMBL:F6HHS6,TrEMBL:G7K066;Derives_from=GSCOCT00038051001;Name=Cc11_g15410;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Plant protein of unknown function (DUF828),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038051001~ Plant protein of unknown function (DUF828)~ unknown_gene~ complete;original_location=join(144665..145653%2C146219..146411%2C146495..146685%2C147059..147217%2C147977..148319);owner=coffea | |
| 73278 chr11 manual_curation exon 31869600 31870959 . + . Parent=GSCOCT00038051001 | |
| 73279 chr11 manual_curation exon 31871525 31871717 . + . Parent=GSCOCT00038051001 | |
| 73280 chr11 manual_curation exon 31871801 31871991 . + . Parent=GSCOCT00038051001 | |
| 73281 chr11 manual_curation exon 31872365 31872523 . + . Parent=GSCOCT00038051001 | |
| 73282 chr11 manual_curation exon 31873283 31873911 . + . Parent=GSCOCT00038051001 | |
| 73283 chr11 manual_curation CDS 31869971 31870959 . + 0 Parent=GSCOCT00038051001 | |
| 73284 chr11 manual_curation CDS 31871525 31871717 . + 2 Parent=GSCOCT00038051001 | |
| 73285 chr11 manual_curation CDS 31871801 31871991 . + 0 Parent=GSCOCT00038051001 | |
| 73286 chr11 manual_curation CDS 31872365 31872523 . + 2 Parent=GSCOCT00038051001 | |
| 73287 chr11 manual_curation CDS 31873283 31873625 . + 2 Parent=GSCOCT00038051001 | |
| 73288 chr11 manual_curation gene 31886775 31889729 . + . ID=GSCOCG00038053001;Name=Cc11_g15420 | |
| 73289 chr11 manual_curation mRNA 31886775 31889729 . + . ID=GSCOCT00038053001;Parent=GSCOCG00038053001;Name=Cc11_g15420 | |
| 73290 chr11 manual_curation polypeptide 31887261 31888584 . + . ID=GSCOCP00038053001;Dbxref=InterPro:IPR005540,InterPro:IPR005541,PFAM:PF03790,PFAM:PF03791,SwissProt:P46640,SwissProt:Q84JS6,SwissProt:Q9FP29,TAIR:AT1G23380.2,TAIR:AT1G62360.1,TAIR:AT1G70510.1,TrEMBL:B9SHD4,TrEMBL:D7TDJ7,TrEMBL:O80408;Derives_from=GSCOCT00038053001;Name=Cc11_g15420;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0005634,CC_EC_number:missing_EC_number,PRODUCT:Homeobox protein knotted-1-like 6,CC_functional_completeness:fragment,CC_gene:KNAT6,CC_gene:KNAT2,CC_gene:OSH6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038053001~ Homeobox protein knotted-1-like 6~ KNAT6~ fragment;original_location=join(161955..162341%2C162808..162930%2C163150..163278);owner=coffea | |
| 73291 chr11 manual_curation exon 31886775 31887647 . + . Parent=GSCOCT00038053001 | |
| 73292 chr11 manual_curation exon 31888114 31888236 . + . Parent=GSCOCT00038053001 | |
| 73293 chr11 manual_curation exon 31888456 31889729 . + . Parent=GSCOCT00038053001 | |
| 73294 chr11 manual_curation CDS 31887261 31887647 . + 0 Parent=GSCOCT00038053001 | |
| 73295 chr11 manual_curation CDS 31888114 31888236 . + 0 Parent=GSCOCT00038053001 | |
| 73296 chr11 manual_curation CDS 31888456 31888584 . + 0 Parent=GSCOCT00038053001 | |
| 73297 chr11 manual_curation gene 31892260 31895031 . + . ID=GSCOCG00038054001;Name=Cc11_g15430 | |
| 73298 chr11 manual_curation mRNA 31892260 31895031 . + . ID=GSCOCT00038054001;Parent=GSCOCG00038054001;Name=Cc11_g15430 | |
| 73299 chr11 manual_curation polypeptide 31892260 31894889 . + . ID=GSCOCP00038054001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001356,InterPro:IPR005539,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR017970,PFAM:PF00046,PFAM:PF03789,PROFILE:PS50071,PROFILE:PS51213,PROSITE:PS00027,SMART:SM00389,SUPERFAMILY:SSF46689,SwissProt:O04134,SwissProt:P46640,SwissProt:Q84JS6,TAIR:AT1G23380.2,TAIR:AT1G70510.1,TAIR:AT4G08150.1,TrEMBL:B9HLS5,TrEMBL:B9SHD4,TrEMBL:Q9SXV4;Derives_from=GSCOCT00038054001;Name=Cc11_g15430;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,GO:0005634,GO:0030528,GO:0043565,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:KNAT6,CC_gene:KNAT2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038054001~ Hypothetical protein~ KNAT6~ missing_functional_completeness;original_location=join(166954..166986%2C167077..167194%2C169051..169289%2C169425..169583);owner=coffea | |
| 73300 chr11 manual_curation exon 31892260 31892292 . + . Parent=GSCOCT00038054001 | |
| 73301 chr11 manual_curation exon 31892383 31892500 . + . Parent=GSCOCT00038054001 | |
| 73302 chr11 manual_curation exon 31894357 31894595 . + . Parent=GSCOCT00038054001 | |
| 73303 chr11 manual_curation exon 31894731 31895031 . + . Parent=GSCOCT00038054001 | |
| 73304 chr11 manual_curation CDS 31892260 31892292 . + 0 Parent=GSCOCT00038054001 | |
| 73305 chr11 manual_curation CDS 31892383 31892500 . + 0 Parent=GSCOCT00038054001 | |
| 73306 chr11 manual_curation CDS 31894357 31894595 . + 1 Parent=GSCOCT00038054001 | |
| 73307 chr11 manual_curation CDS 31894731 31894889 . + 0 Parent=GSCOCT00038054001 | |
| 73308 chr11 manual_curation gene 31896044 31899196 . + . ID=GSCOCG00038055001;Name=Cc11_g15440 | |
| 73309 chr11 manual_curation mRNA 31896044 31899196 . + . ID=GSCOCT00038055001;Parent=GSCOCG00038055001;Name=Cc11_g15440 | |
| 73310 chr11 manual_curation polypeptide 31896044 31898366 . + . ID=GSCOCP00038055001;Dbxref=InterPro:IPR004033,PANTHER:PTHR10108:SF24,PFAM:PF01209,SwissProt:Q3ED65,SwissProt:Q3MD91,SwissProt:Q8YLP4,TAIR:AT1G23360.1,TAIR:AT5G57300.1,TIGRFAMs:TIGR01934,TrEMBL:B9HLS4,TrEMBL:D7KNF1,TrEMBL:D7TDK4;Derives_from=GSCOCT00038055001;Name=Cc11_g15440;Ontology_term=CC_evidence_code:ISS,GO:0008168,CC_EC_number:missing_EC_number,PRODUCT:2-phytyl-1%2C4-beta-naphthoquinone methyltransferase%2C chloroplastic,CC_functional_completeness:complete,CC_gene:MENG,CC_gene:ubiE;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038055001~ 2-phytyl-1%2C4-beta-naphthoquinone methyltransferase%2C chloroplastic~ MENG~ complete;original_location=join(170738..170896%2C171007..171071%2C171175..171265%2C171706..171794%2C172038..172233%2C172644..172743%2C172945..173060);owner=coffea | |
| 73311 chr11 manual_curation exon 31896044 31896202 . + . Parent=GSCOCT00038055001 | |
| 73312 chr11 manual_curation exon 31896313 31896377 . + . Parent=GSCOCT00038055001 | |
| 73313 chr11 manual_curation exon 31896481 31896571 . + . Parent=GSCOCT00038055001 | |
| 73314 chr11 manual_curation exon 31897012 31897100 . + . Parent=GSCOCT00038055001 | |
| 73315 chr11 manual_curation exon 31897344 31897539 . + . Parent=GSCOCT00038055001 | |
| 73316 chr11 manual_curation exon 31897950 31898049 . + . Parent=GSCOCT00038055001 | |
| 73317 chr11 manual_curation exon 31898251 31899196 . + . Parent=GSCOCT00038055001 | |
| 73318 chr11 manual_curation CDS 31896044 31896202 . + 0 Parent=GSCOCT00038055001 | |
| 73319 chr11 manual_curation CDS 31896313 31896377 . + 0 Parent=GSCOCT00038055001 | |
| 73320 chr11 manual_curation CDS 31896481 31896571 . + 2 Parent=GSCOCT00038055001 | |
| 73321 chr11 manual_curation CDS 31897012 31897100 . + 0 Parent=GSCOCT00038055001 | |
| 73322 chr11 manual_curation CDS 31897344 31897539 . + 2 Parent=GSCOCT00038055001 | |
| 73323 chr11 manual_curation CDS 31897950 31898049 . + 0 Parent=GSCOCT00038055001 | |
| 73324 chr11 manual_curation CDS 31898251 31898366 . + 1 Parent=GSCOCT00038055001 | |
| 73325 chr11 manual_curation gene 31899260 31904503 . - . ID=GSCOCG00038056001;Name=Cc11_g15450 | |
| 73326 chr11 manual_curation mRNA 31899260 31904503 . - . ID=GSCOCT00038056001;Parent=GSCOCG00038056001;Name=Cc11_g15450 | |
| 73327 chr11 manual_curation polypeptide 31899401 31902325 . - . ID=GSCOCP00038056001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR002902,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF01657,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q9CAL2,SwissProt:Q9CAL3,SwissProt:Q9FNE1,TAIR:AT1G70520.1,TAIR:AT1G70530.1,TAIR:AT5G40380.1,TrEMBL:A5AGC5,TrEMBL:D7TDK5,TrEMBL:F6HHS8;Derives_from=GSCOCT00038056001;Name=Cc11_g15450;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Cysteine-rich receptor-like protein kinase 2,CC_functional_completeness:complete,CC_gene:CRK2,CC_gene:CRK42,CC_gene:CRK3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038056001~ Cysteine-rich receptor-like protein kinase 2~ CRK2~ complete;original_location=complement(join(176257..177019%2C175943..176056%2C175558..175697%2C175238..175448%2C174844..175078%2C174565..174715%2C174095..174436));owner=coffea | |
| 73328 chr11 manual_curation exon 31904230 31904503 . - . Parent=GSCOCT00038056001 | |
| 73329 chr11 manual_curation exon 31899260 31899742 . - . Parent=GSCOCT00038056001 | |
| 73330 chr11 manual_curation exon 31899871 31900021 . - . Parent=GSCOCT00038056001 | |
| 73331 chr11 manual_curation exon 31900150 31900384 . - . Parent=GSCOCT00038056001 | |
| 73332 chr11 manual_curation exon 31900544 31900754 . - . Parent=GSCOCT00038056001 | |
| 73333 chr11 manual_curation exon 31900864 31901003 . - . Parent=GSCOCT00038056001 | |
| 73334 chr11 manual_curation exon 31901249 31901362 . - . Parent=GSCOCT00038056001 | |
| 73335 chr11 manual_curation exon 31901563 31902360 . - . Parent=GSCOCT00038056001 | |
| 73336 chr11 manual_curation CDS 31899401 31899742 . - 0 Parent=GSCOCT00038056001 | |
| 73337 chr11 manual_curation CDS 31899871 31900021 . - 2 Parent=GSCOCT00038056001 | |
| 73338 chr11 manual_curation CDS 31900150 31900384 . - 1 Parent=GSCOCT00038056001 | |
| 73339 chr11 manual_curation CDS 31900544 31900754 . - 0 Parent=GSCOCT00038056001 | |
| 73340 chr11 manual_curation CDS 31900864 31901003 . - 1 Parent=GSCOCT00038056001 | |
| 73341 chr11 manual_curation CDS 31901249 31901362 . - 1 Parent=GSCOCT00038056001 | |
| 73342 chr11 manual_curation CDS 31901563 31902325 . - 0 Parent=GSCOCT00038056001 | |
| 73343 chr11 manual_curation gene 31911906 31915298 . - . ID=GSCOCG00038057001;Name=Cc11_g15460 | |
| 73344 chr11 manual_curation mRNA 31911906 31915298 . - . ID=GSCOCT00038057001;Parent=GSCOCG00038057001;Name=Cc11_g15460 | |
| 73345 chr11 manual_curation polypeptide 31912254 31915093 . - . ID=GSCOCP00038057001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR002902,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF01657,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q9CAL2,SwissProt:Q9CAL3,SwissProt:Q9FNE1,TAIR:AT1G70520.1,TAIR:AT1G70530.1,TAIR:AT5G40380.1,TrEMBL:A5AGC4,TrEMBL:B9SPH8,TrEMBL:F6HHS9;Derives_from=GSCOCT00038057001;Name=Cc11_g15460;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Cysteine-rich receptor-like protein kinase 3,CC_functional_completeness:complete,CC_gene:CRK3,CC_gene:CRK42,CC_gene:CRK2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038057001~ Cysteine-rich receptor-like protein kinase 3~ CRK3~ complete;original_location=complement(join(189043..189787%2C188612..188728%2C188386..188525%2C187960..188170%2C187642..187876%2C187363..187510%2C186948..187277));owner=coffea | |
| 73346 chr11 manual_curation exon 31911906 31912583 . - . Parent=GSCOCT00038057001 | |
| 73347 chr11 manual_curation exon 31912669 31912816 . - . Parent=GSCOCT00038057001 | |
| 73348 chr11 manual_curation exon 31912948 31913182 . - . Parent=GSCOCT00038057001 | |
| 73349 chr11 manual_curation exon 31913266 31913476 . - . Parent=GSCOCT00038057001 | |
| 73350 chr11 manual_curation exon 31913692 31913831 . - . Parent=GSCOCT00038057001 | |
| 73351 chr11 manual_curation exon 31913918 31914034 . - . Parent=GSCOCT00038057001 | |
| 73352 chr11 manual_curation exon 31914349 31915298 . - . Parent=GSCOCT00038057001 | |
| 73353 chr11 manual_curation CDS 31912254 31912583 . - 0 Parent=GSCOCT00038057001 | |
| 73354 chr11 manual_curation CDS 31912669 31912816 . - 2 Parent=GSCOCT00038057001 | |
| 73355 chr11 manual_curation CDS 31912948 31913182 . - 1 Parent=GSCOCT00038057001 | |
| 73356 chr11 manual_curation CDS 31913266 31913476 . - 0 Parent=GSCOCT00038057001 | |
| 73357 chr11 manual_curation CDS 31913692 31913831 . - 1 Parent=GSCOCT00038057001 | |
| 73358 chr11 manual_curation CDS 31913918 31914034 . - 1 Parent=GSCOCT00038057001 | |
| 73359 chr11 manual_curation CDS 31914349 31915093 . - 0 Parent=GSCOCT00038057001 | |
| 73360 chr11 manual_curation gene 31922041 31924799 . + . ID=GSCOCG00038058001;Name=Cc11_g15470 | |
| 73361 chr11 manual_curation mRNA 31922041 31924799 . + . ID=GSCOCT00038058001;Parent=GSCOCG00038058001;Name=Cc11_g15470 | |
| 73362 chr11 manual_curation polypeptide 31922041 31924799 . + . ID=GSCOCP00038058001;Dbxref=GENE3D:G3DSA:2.160.20.10,InterPro:IPR000743,InterPro:IPR006626,InterPro:IPR011050,InterPro:IPR012334,PFAM:PF00295,SMART:SM00710,SUPERFAMILY:SSF51126,SwissProt:Q7M1E7,SwissProt:Q949Z1,SwissProt:Q94AJ5,TAIR:AT1G10640.1,TAIR:AT1G60590.1,TAIR:AT3G26610.1,TrEMBL:B9SPH9,TrEMBL:D7TDK7,TrEMBL:I1J563;Derives_from=GSCOCT00038058001;Name=Cc11_g15470;Ontology_term=CC_evidence_code:ISS,GO:0004650,GO:0005975,CC_EC_number:3.2.1.67,PRODUCT:Putative Polygalacturonase At1g48100,CC_functional_completeness:complete,CC_gene:At1g48100,CC_gene:At1g80170;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038058001~ Putative Polygalacturonase At1g48100~ At1g48100~ complete;original_location=join(196735..197025%2C197336..197464%2C197659..197829%2C197944..197982%2C198106..198313%2C198522..198603%2C198706..198814%2C199092..199493);owner=coffea | |
| 73363 chr11 manual_curation exon 31922041 31922331 . + . Parent=GSCOCT00038058001 | |
| 73364 chr11 manual_curation exon 31922642 31922770 . + . Parent=GSCOCT00038058001 | |
| 73365 chr11 manual_curation exon 31922965 31923135 . + . Parent=GSCOCT00038058001 | |
| 73366 chr11 manual_curation exon 31923250 31923288 . + . Parent=GSCOCT00038058001 | |
| 73367 chr11 manual_curation exon 31923412 31923619 . + . Parent=GSCOCT00038058001 | |
| 73368 chr11 manual_curation exon 31923828 31923909 . + . Parent=GSCOCT00038058001 | |
| 73369 chr11 manual_curation exon 31924012 31924120 . + . Parent=GSCOCT00038058001 | |
| 73370 chr11 manual_curation exon 31924398 31924799 . + . Parent=GSCOCT00038058001 | |
| 73371 chr11 manual_curation CDS 31922041 31922331 . + 0 Parent=GSCOCT00038058001 | |
| 73372 chr11 manual_curation CDS 31922642 31922770 . + 0 Parent=GSCOCT00038058001 | |
| 73373 chr11 manual_curation CDS 31922965 31923135 . + 0 Parent=GSCOCT00038058001 | |
| 73374 chr11 manual_curation CDS 31923250 31923288 . + 0 Parent=GSCOCT00038058001 | |
| 73375 chr11 manual_curation CDS 31923412 31923619 . + 0 Parent=GSCOCT00038058001 | |
| 73376 chr11 manual_curation CDS 31923828 31923909 . + 1 Parent=GSCOCT00038058001 | |
| 73377 chr11 manual_curation CDS 31924012 31924120 . + 2 Parent=GSCOCT00038058001 | |
| 73378 chr11 manual_curation CDS 31924398 31924799 . + 0 Parent=GSCOCT00038058001 | |
| 73379 chr11 manual_curation gene 31926645 31930004 . - . ID=GSCOCG00038059001;Name=Cc11_g15480 | |
| 73380 chr11 manual_curation mRNA 31926645 31930004 . - . ID=GSCOCT00038059001;Parent=GSCOCG00038059001;Name=Cc11_g15480 | |
| 73381 chr11 manual_curation polypeptide 31926645 31930004 . - . ID=GSCOCP00038059001;Dbxref=InterPro:IPR011701,InterPro:IPR016196,PFAM:PF07690,SUPERFAMILY:SSF103473,SwissProt:O82811,SwissProt:Q9FJH8,SwissProt:Q9LPV5,TAIR:AT1G08090.1,TAIR:AT1G12940.1,TAIR:AT5G60770.1,TrEMBL:B9I3G5,TrEMBL:B9SPI0,TrEMBL:C7SFF9;Derives_from=GSCOCT00038059001;Name=Cc11_g15480;Ontology_term=CC_evidence_code:ISS,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:High affinity nitrate transporter 2.5,CC_functional_completeness:complete,CC_gene:NRT2.5,CC_gene:NRT2.4,CC_gene:NRT2.1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038059001~ High affinity nitrate transporter 2.5~ NRT2.5~ complete;original_location=complement(join(203554..204698%2C201339..201714));owner=coffea | |
| 73382 chr11 manual_curation exon 31926645 31927020 . - . Parent=GSCOCT00038059001 | |
| 73383 chr11 manual_curation exon 31928860 31930004 . - . Parent=GSCOCT00038059001 | |
| 73384 chr11 manual_curation CDS 31926645 31927020 . - 2 Parent=GSCOCT00038059001 | |
| 73385 chr11 manual_curation CDS 31928860 31930004 . - 0 Parent=GSCOCT00038059001 | |
| 73386 chr11 manual_curation gene 31943206 31956762 . + . ID=GSCOCG00038063001;Name=Cc11_g15490 | |
| 73387 chr11 manual_curation mRNA 31943206 31956762 . + . ID=GSCOCT00038063001;Parent=GSCOCG00038063001;Name=Cc11_g15490 | |
| 73388 chr11 manual_curation polypeptide 31943808 31956440 . + . ID=GSCOCP00038063001;Dbxref=InterPro:IPR002192,PFAM:PF01326,SwissProt:Q8LPT9,SwissProt:Q9AWA5,SwissProt:Q9SAC6,TAIR:AT1G10760.1,TAIR:AT4G24450.1,TAIR:AT5G26570.1,TrEMBL:B5B3R3,TrEMBL:D7TDL2,TrEMBL:I0DFJ7;Derives_from=GSCOCT00038063001;Name=Cc11_g15490;Ontology_term=CC_evidence_code:ISS,GO:0005524,GO:0016301,GO:0016310,CC_EC_number:2.7.13.3,PRODUCT:Alpha-glucan water dikinase%2C chloroplastic,CC_functional_completeness:complete,CC_gene:R1,CC_gene:GWD1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038063001~ Alpha-glucan water dikinase%2C chloroplastic~ R1~ complete;original_location=join(218502..218768%2C219237..219278%2C219438..219547%2C219637..219715%2C219830..219921%2C220018..220171%2C220633..220854%2C221038..221376%2C221467..221574%2C221717..221815%2C221943..222083%2C222239..222327%2C222998..223132%2C223362..223524%2C223621..223710%2C223796..223981%2C224470..224532%2C224613..224675%2C224778..224837%2C224931..225083%2C225251..225334%2C226054..226230%2C226332..226438%2C226695..226908%2C226998..227101%2C227266..227398%2C227508..227633%2C228357..228467%2C228888..228986%2C229275..229448%2C229736..229828%2C230637..230752%2C230930..231134);owner=coffea | |
| 73389 chr11 manual_curation exon 31943206 31944074 . + . Parent=GSCOCT00038063001 | |
| 73390 chr11 manual_curation exon 31944543 31944584 . + . Parent=GSCOCT00038063001 | |
| 73391 chr11 manual_curation exon 31944744 31944853 . + . Parent=GSCOCT00038063001 | |
| 73392 chr11 manual_curation exon 31944943 31945021 . + . Parent=GSCOCT00038063001 | |
| 73393 chr11 manual_curation exon 31945136 31945227 . + . Parent=GSCOCT00038063001 | |
| 73394 chr11 manual_curation exon 31945324 31945477 . + . Parent=GSCOCT00038063001 | |
| 73395 chr11 manual_curation exon 31945939 31946160 . + . Parent=GSCOCT00038063001 | |
| 73396 chr11 manual_curation exon 31946344 31946682 . + . Parent=GSCOCT00038063001 | |
| 73397 chr11 manual_curation exon 31946773 31946880 . + . Parent=GSCOCT00038063001 | |
| 73398 chr11 manual_curation exon 31947023 31947121 . + . Parent=GSCOCT00038063001 | |
| 73399 chr11 manual_curation exon 31947249 31947389 . + . Parent=GSCOCT00038063001 | |
| 73400 chr11 manual_curation exon 31947545 31947633 . + . Parent=GSCOCT00038063001 | |
| 73401 chr11 manual_curation exon 31948304 31948438 . + . Parent=GSCOCT00038063001 | |
| 73402 chr11 manual_curation exon 31948668 31948830 . + . Parent=GSCOCT00038063001 | |
| 73403 chr11 manual_curation exon 31948927 31949016 . + . Parent=GSCOCT00038063001 | |
| 73404 chr11 manual_curation exon 31949102 31949287 . + . Parent=GSCOCT00038063001 | |
| 73405 chr11 manual_curation exon 31949776 31949838 . + . Parent=GSCOCT00038063001 | |
| 73406 chr11 manual_curation exon 31949919 31949981 . + . Parent=GSCOCT00038063001 | |
| 73407 chr11 manual_curation exon 31950084 31950143 . + . Parent=GSCOCT00038063001 | |
| 73408 chr11 manual_curation exon 31950237 31950389 . + . Parent=GSCOCT00038063001 | |
| 73409 chr11 manual_curation exon 31950557 31950640 . + . Parent=GSCOCT00038063001 | |
| 73410 chr11 manual_curation exon 31951360 31951536 . + . Parent=GSCOCT00038063001 | |
| 73411 chr11 manual_curation exon 31951638 31951744 . + . Parent=GSCOCT00038063001 | |
| 73412 chr11 manual_curation exon 31952001 31952214 . + . Parent=GSCOCT00038063001 | |
| 73413 chr11 manual_curation exon 31952304 31952407 . + . Parent=GSCOCT00038063001 | |
| 73414 chr11 manual_curation exon 31952572 31952704 . + . Parent=GSCOCT00038063001 | |
| 73415 chr11 manual_curation exon 31952814 31952939 . + . Parent=GSCOCT00038063001 | |
| 73416 chr11 manual_curation exon 31953663 31953773 . + . Parent=GSCOCT00038063001 | |
| 73417 chr11 manual_curation exon 31954194 31954292 . + . Parent=GSCOCT00038063001 | |
| 73418 chr11 manual_curation exon 31954581 31954754 . + . Parent=GSCOCT00038063001 | |
| 73419 chr11 manual_curation exon 31955042 31955134 . + . Parent=GSCOCT00038063001 | |
| 73420 chr11 manual_curation exon 31955943 31956058 . + . Parent=GSCOCT00038063001 | |
| 73421 chr11 manual_curation exon 31956236 31956762 . + . Parent=GSCOCT00038063001 | |
| 73422 chr11 manual_curation CDS 31943808 31944074 . + 0 Parent=GSCOCT00038063001 | |
| 73423 chr11 manual_curation CDS 31944543 31944584 . + 0 Parent=GSCOCT00038063001 | |
| 73424 chr11 manual_curation CDS 31944744 31944853 . + 0 Parent=GSCOCT00038063001 | |
| 73425 chr11 manual_curation CDS 31944943 31945021 . + 2 Parent=GSCOCT00038063001 | |
| 73426 chr11 manual_curation CDS 31945136 31945227 . + 0 Parent=GSCOCT00038063001 | |
| 73427 chr11 manual_curation CDS 31945324 31945477 . + 2 Parent=GSCOCT00038063001 | |
| 73428 chr11 manual_curation CDS 31945939 31946160 . + 0 Parent=GSCOCT00038063001 | |
| 73429 chr11 manual_curation CDS 31946344 31946682 . + 0 Parent=GSCOCT00038063001 | |
| 73430 chr11 manual_curation CDS 31946773 31946880 . + 0 Parent=GSCOCT00038063001 | |
| 73431 chr11 manual_curation CDS 31947023 31947121 . + 0 Parent=GSCOCT00038063001 | |
| 73432 chr11 manual_curation CDS 31947249 31947389 . + 0 Parent=GSCOCT00038063001 | |
| 73433 chr11 manual_curation CDS 31947545 31947633 . + 0 Parent=GSCOCT00038063001 | |
| 73434 chr11 manual_curation CDS 31948304 31948438 . + 2 Parent=GSCOCT00038063001 | |
| 73435 chr11 manual_curation CDS 31948668 31948830 . + 2 Parent=GSCOCT00038063001 | |
| 73436 chr11 manual_curation CDS 31948927 31949016 . + 0 Parent=GSCOCT00038063001 | |
| 73437 chr11 manual_curation CDS 31949102 31949287 . + 0 Parent=GSCOCT00038063001 | |
| 73438 chr11 manual_curation CDS 31949776 31949838 . + 0 Parent=GSCOCT00038063001 | |
| 73439 chr11 manual_curation CDS 31949919 31949981 . + 0 Parent=GSCOCT00038063001 | |
| 73440 chr11 manual_curation CDS 31950084 31950143 . + 0 Parent=GSCOCT00038063001 | |
| 73441 chr11 manual_curation CDS 31950237 31950389 . + 0 Parent=GSCOCT00038063001 | |
| 73442 chr11 manual_curation CDS 31950557 31950640 . + 0 Parent=GSCOCT00038063001 | |
| 73443 chr11 manual_curation CDS 31951360 31951536 . + 0 Parent=GSCOCT00038063001 | |
| 73444 chr11 manual_curation CDS 31951638 31951744 . + 0 Parent=GSCOCT00038063001 | |
| 73445 chr11 manual_curation CDS 31952001 31952214 . + 2 Parent=GSCOCT00038063001 | |
| 73446 chr11 manual_curation CDS 31952304 31952407 . + 0 Parent=GSCOCT00038063001 | |
| 73447 chr11 manual_curation CDS 31952572 31952704 . + 2 Parent=GSCOCT00038063001 | |
| 73448 chr11 manual_curation CDS 31952814 31952939 . + 0 Parent=GSCOCT00038063001 | |
| 73449 chr11 manual_curation CDS 31953663 31953773 . + 0 Parent=GSCOCT00038063001 | |
| 73450 chr11 manual_curation CDS 31954194 31954292 . + 0 Parent=GSCOCT00038063001 | |
| 73451 chr11 manual_curation CDS 31954581 31954754 . + 0 Parent=GSCOCT00038063001 | |
| 73452 chr11 manual_curation CDS 31955042 31955134 . + 0 Parent=GSCOCT00038063001 | |
| 73453 chr11 manual_curation CDS 31955943 31956058 . + 0 Parent=GSCOCT00038063001 | |
| 73454 chr11 manual_curation CDS 31956236 31956440 . + 2 Parent=GSCOCT00038063001 | |
| 73455 chr11 manual_curation gene 31956837 31957971 . - . ID=GSCOCG00038064001;Name=Cc11_g15500 | |
| 73456 chr11 manual_curation mRNA 31956837 31957971 . - . ID=GSCOCT00038064001;Parent=GSCOCG00038064001;Name=Cc11_g15500 | |
| 73457 chr11 manual_curation polypeptide 31956837 31957971 . - . ID=GSCOCP00038064001;Dbxref=InterPro:IPR006917,PANTHER:PTHR11220,PFAM:PF04832,SwissProt:Q9WU63,SwissProt:Q9Y5Z4,TAIR:AT1G17100.1,TAIR:AT1G78460.1,TrEMBL:B9HTV2,TrEMBL:B9SPI4,TrEMBL:D7TDL3;Derives_from=GSCOCT00038064001;Name=Cc11_g15500;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative SOUL heme-binding family protein,CC_functional_completeness:fragment,CC_gene:HEBP2,CC_gene:Hebp2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038064001~ Putative SOUL heme-binding family protein~ HEBP2~ fragment;original_location=complement(join(232436..232665%2C231531..231960));owner=coffea | |
| 73458 chr11 manual_curation exon 31956837 31957266 . - . Parent=GSCOCT00038064001 | |
| 73459 chr11 manual_curation exon 31957742 31957971 . - . Parent=GSCOCT00038064001 | |
| 73460 chr11 manual_curation CDS 31956837 31957266 . - 2 Parent=GSCOCT00038064001 | |
| 73461 chr11 manual_curation CDS 31957742 31957971 . - 0 Parent=GSCOCT00038064001 | |
| 73462 chr11 manual_curation gene 31965577 31970396 . + . ID=GSCOCG00038065001;Name=Cc11_g15510 | |
| 73463 chr11 manual_curation mRNA 31965577 31970396 . + . ID=GSCOCT00038065001;Parent=GSCOCG00038065001;Name=Cc11_g15510 | |
| 73464 chr11 manual_curation polypeptide 31966398 31970396 . + . ID=GSCOCP00038065001;Dbxref=InterPro:IPR004314,PFAM:PF03080,TAIR:AT1G10750.1,TAIR:AT1G23340.1,TAIR:AT1G70550.1,TrEMBL:B9HLS1,TrEMBL:B9HTV1,TrEMBL:Q93X76;Derives_from=GSCOCT00038065001;Name=Cc11_g15510;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of Unknown Function (DUF239),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038065001~ Protein of Unknown Function (DUF239)~ unknown_gene~ complete;original_location=join(241092..241292%2C241394..241480%2C241620..241832%2C242330..242344%2C243043..243096%2C243219..243365%2C244716..245090);owner=coffea | |
| 73465 chr11 manual_curation exon 31965577 31966598 . + . Parent=GSCOCT00038065001 | |
| 73466 chr11 manual_curation exon 31966700 31966786 . + . Parent=GSCOCT00038065001 | |
| 73467 chr11 manual_curation exon 31966926 31967138 . + . Parent=GSCOCT00038065001 | |
| 73468 chr11 manual_curation exon 31967636 31967650 . + . Parent=GSCOCT00038065001 | |
| 73469 chr11 manual_curation exon 31968349 31968402 . + . Parent=GSCOCT00038065001 | |
| 73470 chr11 manual_curation exon 31968525 31968671 . + . Parent=GSCOCT00038065001 | |
| 73471 chr11 manual_curation exon 31970022 31970396 . + . Parent=GSCOCT00038065001 | |
| 73472 chr11 manual_curation CDS 31966398 31966598 . + 0 Parent=GSCOCT00038065001 | |
| 73473 chr11 manual_curation CDS 31966700 31966786 . + 0 Parent=GSCOCT00038065001 | |
| 73474 chr11 manual_curation CDS 31966926 31967138 . + 0 Parent=GSCOCT00038065001 | |
| 73475 chr11 manual_curation CDS 31967636 31967650 . + 0 Parent=GSCOCT00038065001 | |
| 73476 chr11 manual_curation CDS 31968349 31968402 . + 0 Parent=GSCOCT00038065001 | |
| 73477 chr11 manual_curation CDS 31968525 31968671 . + 0 Parent=GSCOCT00038065001 | |
| 73478 chr11 manual_curation CDS 31970022 31970396 . + 0 Parent=GSCOCT00038065001 | |
| 73479 chr11 manual_curation gene 31979119 31984160 . + . ID=GSCOCG00038067001;Name=Cc11_g15520 | |
| 73480 chr11 manual_curation mRNA 31979119 31984160 . + . ID=GSCOCT00038067001;Parent=GSCOCG00038067001;Name=Cc11_g15520 | |
| 73481 chr11 manual_curation polypeptide 31979887 31983856 . + . ID=GSCOCP00038067001;Dbxref=SwissProt:P04635,SwissProt:Q6GJZ6,SwissProt:Q8NYC2,TAIR:AT1G10740.1,TAIR:AT1G23330.1,TrEMBL:B9SPI7,TrEMBL:C6TBW3,TrEMBL:D7SYZ3;Derives_from=GSCOCT00038067001;Name=Cc11_g15520;Ontology_term=CC_evidence_code:ISS,CC_EC_number:3.1.1.3,PRODUCT:Putative Lipase,CC_functional_completeness:fragment,CC_gene:lip,CC_gene:lip2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038067001~ Putative Lipase~ lip~ fragment;original_location=join(254581..254829%2C254951..255045%2C255140..255243%2C255356..255456%2C255547..255650%2C255999..256436%2C256576..256707%2C258397..258550);owner=coffea | |
| 73482 chr11 manual_curation exon 31979119 31980135 . + . Parent=GSCOCT00038067001 | |
| 73483 chr11 manual_curation exon 31980257 31980351 . + . Parent=GSCOCT00038067001 | |
| 73484 chr11 manual_curation exon 31980446 31980549 . + . Parent=GSCOCT00038067001 | |
| 73485 chr11 manual_curation exon 31980662 31980762 . + . Parent=GSCOCT00038067001 | |
| 73486 chr11 manual_curation exon 31980853 31980956 . + . Parent=GSCOCT00038067001 | |
| 73487 chr11 manual_curation exon 31981305 31981742 . + . Parent=GSCOCT00038067001 | |
| 73488 chr11 manual_curation exon 31981882 31982013 . + . Parent=GSCOCT00038067001 | |
| 73489 chr11 manual_curation exon 31983703 31984160 . + . Parent=GSCOCT00038067001 | |
| 73490 chr11 manual_curation CDS 31979887 31980135 . + 0 Parent=GSCOCT00038067001 | |
| 73491 chr11 manual_curation CDS 31980257 31980351 . + 0 Parent=GSCOCT00038067001 | |
| 73492 chr11 manual_curation CDS 31980446 31980549 . + 2 Parent=GSCOCT00038067001 | |
| 73493 chr11 manual_curation CDS 31980662 31980762 . + 1 Parent=GSCOCT00038067001 | |
| 73494 chr11 manual_curation CDS 31980853 31980956 . + 0 Parent=GSCOCT00038067001 | |
| 73495 chr11 manual_curation CDS 31981305 31981742 . + 2 Parent=GSCOCT00038067001 | |
| 73496 chr11 manual_curation CDS 31981882 31982013 . + 2 Parent=GSCOCT00038067001 | |
| 73497 chr11 manual_curation CDS 31983703 31983856 . + 2 Parent=GSCOCT00038067001 | |
| 73498 chr11 manual_curation gene 31986803 31989068 . + . ID=GSCOCG00038068001;Name=Cc11_g15530 | |
| 73499 chr11 manual_curation mRNA 31986803 31989068 . + . ID=GSCOCT00038068001;Parent=GSCOCG00038068001;Name=Cc11_g15530 | |
| 73500 chr11 manual_curation polypeptide 31986803 31989068 . + . ID=GSCOCP00038068001;Dbxref=GENE3D:G3DSA:3.40.640.10,GENE3D:G3DSA:3.90.1150.10,InterPro:IPR006948,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,PFAM:PF04864,SUPERFAMILY:SSF53383,SwissProt:Q94A02,SwissProt:Q9LR29,SwissProt:Q9S7N2,TAIR:AT1G23320.1,TAIR:AT1G70560.1,TAIR:AT4G24670.1,TrEMBL:A5B9G3,TrEMBL:B9SPI8,TrEMBL:D7SHL6;Derives_from=GSCOCT00038068001;Name=Cc11_g15530;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0016846,GO:0030170,CC_EC_number:4.4.1.4,PRODUCT:Tryptophan aminotransferase 1,CC_functional_completeness:complete,CC_gene:TAA1,CC_gene:TAR2,CC_gene:TAR1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038068001~ Tryptophan aminotransferase 1~ TAA1~ complete;original_location=join(261497..261621%2C262057..262360%2C262754..263034%2C263147..263448%2C263563..263762);owner=coffea | |
| 73501 chr11 manual_curation exon 31986803 31986927 . + . Parent=GSCOCT00038068001 | |
| 73502 chr11 manual_curation exon 31987363 31987666 . + . Parent=GSCOCT00038068001 | |
| 73503 chr11 manual_curation exon 31988060 31988340 . + . Parent=GSCOCT00038068001 | |
| 73504 chr11 manual_curation exon 31988453 31988754 . + . Parent=GSCOCT00038068001 | |
| 73505 chr11 manual_curation exon 31988869 31989068 . + . Parent=GSCOCT00038068001 | |
| 73506 chr11 manual_curation CDS 31986803 31986927 . + 0 Parent=GSCOCT00038068001 | |
| 73507 chr11 manual_curation CDS 31987363 31987666 . + 2 Parent=GSCOCT00038068001 | |
| 73508 chr11 manual_curation CDS 31988060 31988340 . + 0 Parent=GSCOCT00038068001 | |
| 73509 chr11 manual_curation CDS 31988453 31988754 . + 2 Parent=GSCOCT00038068001 | |
| 73510 chr11 manual_curation CDS 31988869 31989068 . + 1 Parent=GSCOCT00038068001 | |
| 73511 chr11 manual_curation gene 31990695 31996404 . - . ID=GSCOCG00038070001;Name=Cc11_g15540 | |
| 73512 chr11 manual_curation mRNA 31990695 31996404 . - . ID=GSCOCT00038070001;Parent=GSCOCG00038070001;Name=Cc11_g15540 | |
| 73513 chr11 manual_curation polypeptide 31990890 31996269 . - . ID=GSCOCP00038070001;Dbxref=InterPro:IPR001392,InterPro:IPR008968,InterPro:IPR011012,InterPro:IPR018240,InterPro:IPR022775,PFAM:PF00928,PFAM:PF01217,PIR:PIRSF005992,PRINTS:PR00314,PROFILE:PS51072,PROSITE:PS00990,PROSITE:PS00991,SUPERFAMILY:SSF49447,SUPERFAMILY:SSF64356,SwissProt:Q2KJ81,SwissProt:Q32Q06,SwissProt:Q9BXS5,TAIR:AT1G10730.1,TAIR:AT1G60780.1,TAIR:AT5G46630.2,TrEMBL:B9RAX0,TrEMBL:D7SYS4,TrEMBL:G5DWW9;Derives_from=GSCOCT00038070001;Name=Cc11_g15540;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0006810,GO:0006886,GO:0016192,GO:0030131,CC_EC_number:missing_EC_number,PRODUCT:AP-1 complex subunit mu-1,CC_functional_completeness:complete,CC_gene:AP1M1,CC_gene:Ap1m1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038070001~ AP-1 complex subunit mu-1~ AP1M1~ complete;original_location=complement(join(270835..270963%2C269789..269935%2C269624..269686%2C269341..269517%2C269156..269259%2C268091..268198%2C267863..267959%2C266685..266782%2C266351..266492%2C266055..266177%2C265584..265682));owner=coffea | |
| 73514 chr11 manual_curation exon 31990695 31990988 . - . Parent=GSCOCT00038070001 | |
| 73515 chr11 manual_curation exon 31991361 31991483 . - . Parent=GSCOCT00038070001 | |
| 73516 chr11 manual_curation exon 31991657 31991798 . - . Parent=GSCOCT00038070001 | |
| 73517 chr11 manual_curation exon 31991991 31992088 . - . Parent=GSCOCT00038070001 | |
| 73518 chr11 manual_curation exon 31993169 31993265 . - . Parent=GSCOCT00038070001 | |
| 73519 chr11 manual_curation exon 31993397 31993504 . - . Parent=GSCOCT00038070001 | |
| 73520 chr11 manual_curation exon 31994462 31994565 . - . Parent=GSCOCT00038070001 | |
| 73521 chr11 manual_curation exon 31994647 31994823 . - . Parent=GSCOCT00038070001 | |
| 73522 chr11 manual_curation exon 31994930 31994992 . - . Parent=GSCOCT00038070001 | |
| 73523 chr11 manual_curation exon 31995095 31995241 . - . Parent=GSCOCT00038070001 | |
| 73524 chr11 manual_curation exon 31996141 31996404 . - . Parent=GSCOCT00038070001 | |
| 73525 chr11 manual_curation CDS 31990890 31990988 . - 0 Parent=GSCOCT00038070001 | |
| 73526 chr11 manual_curation CDS 31991361 31991483 . - 0 Parent=GSCOCT00038070001 | |
| 73527 chr11 manual_curation CDS 31991657 31991798 . - 2 Parent=GSCOCT00038070001 | |
| 73528 chr11 manual_curation CDS 31991991 31992088 . - 0 Parent=GSCOCT00038070001 | |
| 73529 chr11 manual_curation CDS 31993169 31993265 . - 2 Parent=GSCOCT00038070001 | |
| 73530 chr11 manual_curation CDS 31993397 31993504 . - 2 Parent=GSCOCT00038070001 | |
| 73531 chr11 manual_curation CDS 31994462 31994565 . - 0 Parent=GSCOCT00038070001 | |
| 73532 chr11 manual_curation CDS 31994647 31994823 . - 0 Parent=GSCOCT00038070001 | |
| 73533 chr11 manual_curation CDS 31994930 31994992 . - 0 Parent=GSCOCT00038070001 | |
| 73534 chr11 manual_curation CDS 31995095 31995241 . - 0 Parent=GSCOCT00038070001 | |
| 73535 chr11 manual_curation CDS 31996141 31996269 . - 0 Parent=GSCOCT00038070001 | |
| 73536 chr11 manual_curation gene 31998156 32002345 . - . ID=GSCOCG00038071001;Name=Cc11_g15550 | |
| 73537 chr11 manual_curation mRNA 31998156 32002345 . - . ID=GSCOCT00038071001;Parent=GSCOCG00038071001;Name=Cc11_g15550 | |
| 73538 chr11 manual_curation polypeptide 31998156 32002345 . - . ID=GSCOCP00038071001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR002482,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SMART:SM00257,SUPERFAMILY:SSF56112,SwissProt:Q9FFW5,SwissProt:Q9LQQ8,SwissProt:Q9SGY7,TAIR:AT1G51940.1,TAIR:AT3G21630.1,TAIR:AT4G02010.1,TrEMBL:B9SPJ3,TrEMBL:D3KU53,TrEMBL:G7JZ13;Derives_from=GSCOCT00038071001;Name=Cc11_g15550;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,GO:0016998,CC_EC_number:2.7.11.25,PRODUCT:Putative protein kinase family protein / peptidoglycan-binding LysM domain-containing protein,CC_functional_completeness:complete,CC_gene:PERK8,CC_gene:At1g07870,CC_gene:PERK11;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038071001~ Putative protein kinase family protein / peptidoglycan-binding LysM domain-containing protein~ PERK8~ complete;original_location=complement(join(276391..277039%2C275528..275737%2C275281..275420%2C275084..275173%2C274897..275002%2C274172..274323%2C273920..274017%2C273588..273726%2C273208..273306%2C272850..273014));owner=coffea | |
| 73539 chr11 manual_curation exon 31998156 31998320 . - . Parent=GSCOCT00038071001 | |
| 73540 chr11 manual_curation exon 31998514 31998612 . - . Parent=GSCOCT00038071001 | |
| 73541 chr11 manual_curation exon 31998894 31999032 . - . Parent=GSCOCT00038071001 | |
| 73542 chr11 manual_curation exon 31999226 31999323 . - . Parent=GSCOCT00038071001 | |
| 73543 chr11 manual_curation exon 31999478 31999629 . - . Parent=GSCOCT00038071001 | |
| 73544 chr11 manual_curation exon 32000203 32000308 . - . Parent=GSCOCT00038071001 | |
| 73545 chr11 manual_curation exon 32000390 32000479 . - . Parent=GSCOCT00038071001 | |
| 73546 chr11 manual_curation exon 32000587 32000726 . - . Parent=GSCOCT00038071001 | |
| 73547 chr11 manual_curation exon 32000834 32001043 . - . Parent=GSCOCT00038071001 | |
| 73548 chr11 manual_curation exon 32001697 32002345 . - . Parent=GSCOCT00038071001 | |
| 73549 chr11 manual_curation CDS 31998156 31998320 . - 0 Parent=GSCOCT00038071001 | |
| 73550 chr11 manual_curation CDS 31998514 31998612 . - 0 Parent=GSCOCT00038071001 | |
| 73551 chr11 manual_curation CDS 31998894 31999032 . - 2 Parent=GSCOCT00038071001 | |
| 73552 chr11 manual_curation CDS 31999226 31999323 . - 0 Parent=GSCOCT00038071001 | |
| 73553 chr11 manual_curation CDS 31999478 31999629 . - 1 Parent=GSCOCT00038071001 | |
| 73554 chr11 manual_curation CDS 32000203 32000308 . - 0 Parent=GSCOCT00038071001 | |
| 73555 chr11 manual_curation CDS 32000390 32000479 . - 0 Parent=GSCOCT00038071001 | |
| 73556 chr11 manual_curation CDS 32000587 32000726 . - 1 Parent=GSCOCT00038071001 | |
| 73557 chr11 manual_curation CDS 32000834 32001043 . - 1 Parent=GSCOCT00038071001 | |
| 73558 chr11 manual_curation CDS 32001697 32002345 . - 0 Parent=GSCOCT00038071001 | |
| 73559 chr11 manual_curation gene 32004598 32008027 . - . ID=GSCOCG00038072001;Name=Cc11_g15560 | |
| 73560 chr11 manual_curation mRNA 32004598 32008027 . - . ID=GSCOCT00038072001;Parent=GSCOCG00038072001;Name=Cc11_g15560 | |
| 73561 chr11 manual_curation polypeptide 32004598 32008027 . - . ID=GSCOCP00038072001;Dbxref=TAIR:AT1G10710.1,TrEMBL:B9HTU7,TrEMBL:B9SPJ5,TrEMBL:D7SYS0;Derives_from=GSCOCT00038072001;Name=Cc11_g15560;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative poor homologous synapsis 1,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038072001~ Putative poor homologous synapsis 1~ unknown_gene~ complete;original_location=complement(join(282401..282721%2C281363..281426%2C280707..280801%2C280380..280480%2C279971..280167%2C279838..279890%2C279684..279711%2C279292..279353));owner=coffea | |
| 73562 chr11 manual_curation exon 32004598 32004659 . - . Parent=GSCOCT00038072001 | |
| 73563 chr11 manual_curation exon 32004990 32005017 . - . Parent=GSCOCT00038072001 | |
| 73564 chr11 manual_curation exon 32005144 32005196 . - . Parent=GSCOCT00038072001 | |
| 73565 chr11 manual_curation exon 32005277 32005473 . - . Parent=GSCOCT00038072001 | |
| 73566 chr11 manual_curation exon 32005686 32005786 . - . Parent=GSCOCT00038072001 | |
| 73567 chr11 manual_curation exon 32006013 32006107 . - . Parent=GSCOCT00038072001 | |
| 73568 chr11 manual_curation exon 32006669 32006732 . - . Parent=GSCOCT00038072001 | |
| 73569 chr11 manual_curation exon 32007707 32008027 . - . Parent=GSCOCT00038072001 | |
| 73570 chr11 manual_curation CDS 32004598 32004659 . - 1 Parent=GSCOCT00038072001 | |
| 73571 chr11 manual_curation CDS 32004990 32005017 . - 0 Parent=GSCOCT00038072001 | |
| 73572 chr11 manual_curation CDS 32005144 32005196 . - 1 Parent=GSCOCT00038072001 | |
| 73573 chr11 manual_curation CDS 32005277 32005473 . - 2 Parent=GSCOCT00038072001 | |
| 73574 chr11 manual_curation CDS 32005686 32005786 . - 0 Parent=GSCOCT00038072001 | |
| 73575 chr11 manual_curation CDS 32006013 32006107 . - 1 Parent=GSCOCT00038072001 | |
| 73576 chr11 manual_curation CDS 32006669 32006732 . - 0 Parent=GSCOCT00038072001 | |
| 73577 chr11 manual_curation CDS 32007707 32008027 . - 0 Parent=GSCOCT00038072001 | |
| 73578 chr11 manual_curation gene 32009420 32013186 . - . ID=GSCOCG00038073001;Name=Cc11_g15570 | |
| 73579 chr11 manual_curation mRNA 32009420 32013186 . - . ID=GSCOCT00038073001;Parent=GSCOCG00038073001;Name=Cc11_g15570 | |
| 73580 chr11 manual_curation polypeptide 32010003 32013054 . - . ID=GSCOCP00038073001;Dbxref=InterPro:IPR000836,InterPro:IPR005946,PFAM:PF00156,SwissProt:Q8S2E5,SwissProt:Q93Z66,SwissProt:Q9XGA0,TAIR:AT1G10700.1,TAIR:AT2G35390.2,TAIR:AT2G42910.1,TIGRFAMs:TIGR01251,TrEMBL:B9HTU5,TrEMBL:B9SPJ7,TrEMBL:D7SYR8;Derives_from=GSCOCT00038073001;Name=Cc11_g15570;Ontology_term=CC_evidence_code:ISS,GO:0000287,GO:0004749,GO:0009116,GO:0009165,CC_EC_number:2.7.6.1,PRODUCT:Ribose-phosphate pyrophosphokinase 3%2C mitochondrial,CC_functional_completeness:complete,CC_gene:PRS3,CC_gene:Os01g0723600;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038073001~ Ribose-phosphate pyrophosphokinase 3%2C mitochondrial~ PRS3~ complete;original_location=complement(join(287384..287748%2C286766..287081%2C286552..286647%2C286162..286230%2C285784..285912%2C285203..285302%2C284697..284830));owner=coffea | |
| 73581 chr11 manual_curation exon 32009420 32010136 . - . Parent=GSCOCT00038073001 | |
| 73582 chr11 manual_curation exon 32010509 32010608 . - . Parent=GSCOCT00038073001 | |
| 73583 chr11 manual_curation exon 32011090 32011218 . - . Parent=GSCOCT00038073001 | |
| 73584 chr11 manual_curation exon 32011468 32011536 . - . Parent=GSCOCT00038073001 | |
| 73585 chr11 manual_curation exon 32011858 32011953 . - . Parent=GSCOCT00038073001 | |
| 73586 chr11 manual_curation exon 32012072 32012387 . - . Parent=GSCOCT00038073001 | |
| 73587 chr11 manual_curation exon 32012690 32013186 . - . Parent=GSCOCT00038073001 | |
| 73588 chr11 manual_curation CDS 32010003 32010136 . - 1 Parent=GSCOCT00038073001 | |
| 73589 chr11 manual_curation CDS 32010509 32010608 . - 0 Parent=GSCOCT00038073001 | |
| 73590 chr11 manual_curation CDS 32011090 32011218 . - 0 Parent=GSCOCT00038073001 | |
| 73591 chr11 manual_curation CDS 32011468 32011536 . - 0 Parent=GSCOCT00038073001 | |
| 73592 chr11 manual_curation CDS 32011858 32011953 . - 0 Parent=GSCOCT00038073001 | |
| 73593 chr11 manual_curation CDS 32012072 32012387 . - 2 Parent=GSCOCT00038073001 | |
| 73594 chr11 manual_curation CDS 32012690 32013054 . - 0 Parent=GSCOCT00038073001 | |
| 73595 chr11 manual_curation gene 32015789 32022215 . + . ID=GSCOCG00038075001;Name=Cc11_g15580 | |
| 73596 chr11 manual_curation mRNA 32015789 32022215 . + . ID=GSCOCT00038075001;Parent=GSCOCG00038075001;Name=Cc11_g15580 | |
| 73597 chr11 manual_curation polypeptide 32016772 32021881 . + . ID=GSCOCP00038075001;Dbxref=GENE3D:G3DSA:3.40.640.10,GENE3D:G3DSA:3.90.1150.10,InterPro:IPR001176,InterPro:IPR004839,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,PFAM:PF00155,PRINTS:PR00753,SUPERFAMILY:SSF53383,SwissProt:P52894,SwissProt:Q9LR30,SwissProt:Q9S7E9,TAIR:AT1G17290.1,TAIR:AT1G23310.1,TAIR:AT1G70580.1,TrEMBL:A5ACX0,TrEMBL:D7SYR7,TrEMBL:Q45RS3;Derives_from=GSCOCT00038075001;Name=Cc11_g15580;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0009058,GO:0016847,GO:0030170,CC_EC_number:2.6.1.2,PRODUCT:Glutamate--glyoxylate aminotransferase 2,CC_functional_completeness:complete,CC_gene:GGAT2,CC_gene:GGAT1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038075001~ Glutamate--glyoxylate aminotransferase 2~ GGAT2~ complete;original_location=join(291466..291582%2C292088..292153%2C292255..292372%2C293028..293109%2C293213..293300%2C293468..293626%2C294007..294180%2C294259..294390%2C294755..294820%2C295133..295197%2C295599..295690%2C295771..295927%2C296446..296575);owner=coffea | |
| 73598 chr11 manual_curation exon 32015789 32015884 . + . Parent=GSCOCT00038075001 | |
| 73599 chr11 manual_curation exon 32016487 32016539 . + . Parent=GSCOCT00038075001 | |
| 73600 chr11 manual_curation exon 32016745 32016888 . + . Parent=GSCOCT00038075001 | |
| 73601 chr11 manual_curation exon 32017394 32017459 . + . Parent=GSCOCT00038075001 | |
| 73602 chr11 manual_curation exon 32017561 32017678 . + . Parent=GSCOCT00038075001 | |
| 73603 chr11 manual_curation exon 32018334 32018415 . + . Parent=GSCOCT00038075001 | |
| 73604 chr11 manual_curation exon 32018519 32018606 . + . Parent=GSCOCT00038075001 | |
| 73605 chr11 manual_curation exon 32018774 32018932 . + . Parent=GSCOCT00038075001 | |
| 73606 chr11 manual_curation exon 32019313 32019486 . + . Parent=GSCOCT00038075001 | |
| 73607 chr11 manual_curation exon 32019565 32019696 . + . Parent=GSCOCT00038075001 | |
| 73608 chr11 manual_curation exon 32020061 32020126 . + . Parent=GSCOCT00038075001 | |
| 73609 chr11 manual_curation exon 32020439 32020503 . + . Parent=GSCOCT00038075001 | |
| 73610 chr11 manual_curation exon 32020905 32020996 . + . Parent=GSCOCT00038075001 | |
| 73611 chr11 manual_curation exon 32021077 32021233 . + . Parent=GSCOCT00038075001 | |
| 73612 chr11 manual_curation exon 32021752 32022215 . + . Parent=GSCOCT00038075001 | |
| 73613 chr11 manual_curation CDS 32016772 32016888 . + 0 Parent=GSCOCT00038075001 | |
| 73614 chr11 manual_curation CDS 32017394 32017459 . + 0 Parent=GSCOCT00038075001 | |
| 73615 chr11 manual_curation CDS 32017561 32017678 . + 0 Parent=GSCOCT00038075001 | |
| 73616 chr11 manual_curation CDS 32018334 32018415 . + 1 Parent=GSCOCT00038075001 | |
| 73617 chr11 manual_curation CDS 32018519 32018606 . + 2 Parent=GSCOCT00038075001 | |
| 73618 chr11 manual_curation CDS 32018774 32018932 . + 0 Parent=GSCOCT00038075001 | |
| 73619 chr11 manual_curation CDS 32019313 32019486 . + 0 Parent=GSCOCT00038075001 | |
| 73620 chr11 manual_curation CDS 32019565 32019696 . + 0 Parent=GSCOCT00038075001 | |
| 73621 chr11 manual_curation CDS 32020061 32020126 . + 0 Parent=GSCOCT00038075001 | |
| 73622 chr11 manual_curation CDS 32020439 32020503 . + 0 Parent=GSCOCT00038075001 | |
| 73623 chr11 manual_curation CDS 32020905 32020996 . + 2 Parent=GSCOCT00038075001 | |
| 73624 chr11 manual_curation CDS 32021077 32021233 . + 1 Parent=GSCOCT00038075001 | |
| 73625 chr11 manual_curation CDS 32021752 32021881 . + 2 Parent=GSCOCT00038075001 | |
| 73626 chr11 manual_curation gene 32022842 32024041 . + . ID=GSCOCG00038076001;Name=Cc11_g15590 | |
| 73627 chr11 manual_curation mRNA 32022842 32024041 . + . ID=GSCOCT00038076001;Parent=GSCOCG00038076001;Name=Cc11_g15590 | |
| 73628 chr11 manual_curation polypeptide 32023404 32023718 . + . ID=GSCOCP00038076001;Dbxref=TAIR:AT1G10690.1,TAIR:AT1G60783.1,TAIR:AT5G40460.1,TrEMBL:A5C232,TrEMBL:B9S646,TrEMBL:F6H7W9;Derives_from=GSCOCT00038076001;Name=Cc11_g15590;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038076001~ Putative unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27630.1)%3B Has 87 Blast hits to 87 proteins in 12 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 87%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=298098..298412;owner=coffea | |
| 73629 chr11 manual_curation exon 32022842 32024041 . + . Parent=GSCOCT00038076001 | |
| 73630 chr11 manual_curation CDS 32023404 32023718 . + 0 Parent=GSCOCT00038076001 | |
| 73631 chr11 manual_curation gene 32031947 32035337 . + . ID=GSCOCG00038077001;Name=Cc11_g15600 | |
| 73632 chr11 manual_curation mRNA 32031947 32035337 . + . ID=GSCOCT00038077001;Parent=GSCOCG00038077001;Name=Cc11_g15600 | |
| 73633 chr11 manual_curation polypeptide 32032521 32035032 . + . ID=GSCOCP00038077001;Dbxref=GENE3D:G3DSA:1.25.40.10,InterPro:IPR006597,InterPro:IPR011990,PFAM:PF08238,SMART:SM00671,SwissProt:Q94C27,SwissProt:Q9ESM7,SwissProt:Q9UBV2,TAIR:AT1G70590.1,TrEMBL:B9HTU2,TrEMBL:B9SPK1,TrEMBL:F6H7W8;Derives_from=GSCOCT00038077001;Name=Cc11_g15600;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:F-box protein At1g70590,CC_functional_completeness:fragment,CC_gene:At1g70590,CC_gene:Sel1l,CC_gene:SEL1L;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038077001~ F-box protein At1g70590~ At1g70590~ fragment;original_location=join(307215..307311%2C308188..308321%2C308738..308920%2C309559..309726);owner=coffea | |
| 73634 chr11 manual_curation exon 32031947 32032617 . + . Parent=GSCOCT00038077001 | |
| 73635 chr11 manual_curation exon 32033494 32033627 . + . Parent=GSCOCT00038077001 | |
| 73636 chr11 manual_curation exon 32034044 32034226 . + . Parent=GSCOCT00038077001 | |
| 73637 chr11 manual_curation exon 32034865 32035337 . + . Parent=GSCOCT00038077001 | |
| 73638 chr11 manual_curation CDS 32032521 32032617 . + 0 Parent=GSCOCT00038077001 | |
| 73639 chr11 manual_curation CDS 32033494 32033627 . + 1 Parent=GSCOCT00038077001 | |
| 73640 chr11 manual_curation CDS 32034044 32034226 . + 0 Parent=GSCOCT00038077001 | |
| 73641 chr11 manual_curation CDS 32034865 32035032 . + 0 Parent=GSCOCT00038077001 | |
| 73642 chr11 manual_curation gene 32036652 32038640 . - . ID=GSCOCG00038078001;Name=Cc11_g15610 | |
| 73643 chr11 manual_curation mRNA 32036652 32038640 . - . ID=GSCOCT00038078001;Parent=GSCOCG00038078001;Name=Cc11_g15610 | |
| 73644 chr11 manual_curation polypeptide 32036652 32038640 . - . ID=GSCOCP00038078001;Dbxref=GENE3D:G3DSA:1.25.10.10,InterPro:IPR000225,InterPro:IPR011989,InterPro:IPR016024,PFAM:PF00514,PROFILE:PS50176,SMART:SM00185,SUPERFAMILY:SSF48371,TAIR:AT3G26600.1,TAIR:AT4G34940.1,TAIR:AT5G66200.1,TrEMBL:B9HTU1,TrEMBL:B9SPK2,TrEMBL:I1J543;Derives_from=GSCOCT00038078001;Name=Cc11_g15610;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:armadillo repeat only 4,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038078001~ armadillo repeat only 4~ unknown_gene~ complete;original_location=complement(311346..313334);owner=coffea | |
| 73645 chr11 manual_curation exon 32036652 32038640 . - . Parent=GSCOCT00038078001 | |
| 73646 chr11 manual_curation CDS 32036652 32038640 . - 0 Parent=GSCOCT00038078001 | |
| 73647 chr11 manual_curation gene 32041216 32044015 . - . ID=GSCOCG00038079001;Name=Cc11_g15620 | |
| 73648 chr11 manual_curation mRNA 32041216 32044015 . - . ID=GSCOCT00038079001;Parent=GSCOCG00038079001;Name=Cc11_g15620 | |
| 73649 chr11 manual_curation polypeptide 32041371 32044015 . - . ID=GSCOCP00038079001;Dbxref=GENE3D:G3DSA:2.70.98.20,InterPro:IPR000269,InterPro:IPR015798,PANTHER:PTHR10638,PFAM:PF01179,SUPERFAMILY:SSF49998,SwissProt:P46881,SwissProt:Q07121,SwissProt:Q07123,TAIR:AT2G42490.1,TAIR:AT4G12280.1,TAIR:AT4G12290.1,TrEMBL:D7LIT1,TrEMBL:D7SYR4,TrEMBL:I1JC69;Derives_from=GSCOCT00038079001;Name=Cc11_g15620;Ontology_term=CC_evidence_code:ISS,GO:0005507,GO:0008131,GO:0009308,GO:0048038,GO:0055114,CC_EC_number:1.4.3.6,PRODUCT:Putative Primary amine oxidase,CC_functional_completeness:fragment,CC_gene:maoI,CC_gene:maoII;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038079001~ Putative Primary amine oxidase~ maoI~ fragment;original_location=complement(join(318476..318709%2C317586..317726%2C316777..317045%2C316464..316545%2C316065..316187));owner=coffea | |
| 73650 chr11 manual_curation exon 32041216 32041493 . - . Parent=GSCOCT00038079001 | |
| 73651 chr11 manual_curation exon 32041770 32041851 . - . Parent=GSCOCT00038079001 | |
| 73652 chr11 manual_curation exon 32042083 32042351 . - . Parent=GSCOCT00038079001 | |
| 73653 chr11 manual_curation exon 32042892 32043032 . - . Parent=GSCOCT00038079001 | |
| 73654 chr11 manual_curation exon 32043782 32044015 . - . Parent=GSCOCT00038079001 | |
| 73655 chr11 manual_curation CDS 32041371 32041493 . - 0 Parent=GSCOCT00038079001 | |
| 73656 chr11 manual_curation CDS 32041770 32041851 . - 2 Parent=GSCOCT00038079001 | |
| 73657 chr11 manual_curation CDS 32042083 32042351 . - 0 Parent=GSCOCT00038079001 | |
| 73658 chr11 manual_curation CDS 32042892 32043032 . - 0 Parent=GSCOCT00038079001 | |
| 73659 chr11 manual_curation CDS 32043782 32044015 . - 0 Parent=GSCOCT00038079001 | |
| 73660 chr11 manual_curation gene 32044200 32046948 . - . ID=GSCOCG00038080001;Name=Cc11_g15630 | |
| 73661 chr11 manual_curation mRNA 32044200 32046948 . - . ID=GSCOCT00038080001;Parent=GSCOCG00038080001;Name=Cc11_g15630 | |
| 73662 chr11 manual_curation polypeptide 32044200 32046085 . - . ID=GSCOCP00038080001;Dbxref=GENE3D:G3DSA:2.70.98.20,GENE3D:G3DSA:3.10.450.40,InterPro:IPR000269,InterPro:IPR015798,InterPro:IPR015800,InterPro:IPR015801,InterPro:IPR015802,InterPro:IPR016182,PANTHER:PTHR10638,PFAM:PF01179,PFAM:PF02727,PFAM:PF02728,SUPERFAMILY:SSF49998,SUPERFAMILY:SSF54416,SwissProt:Q07121,SwissProt:Q07123,SwissProt:Q59118,TAIR:AT1G31670.1,TAIR:AT1G31690.1,TAIR:AT2G42490.1,TrEMBL:B9SPK3,TrEMBL:I1JC69,TrEMBL:I1KXB5;Derives_from=GSCOCT00038080001;Name=Cc11_g15630;Ontology_term=CC_evidence_code:ISS,GO:0005507,GO:0008131,GO:0009308,GO:0048038,GO:0055114,CC_EC_number:1.4.3.6,PRODUCT:Putative Primary amine oxidase,CC_functional_completeness:fragment,CC_gene:maoI,CC_gene:maoII;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038080001~ Putative Primary amine oxidase~ maoI~ fragment;original_location=complement(join(320681..320779%2C320484..320581%2C320276..320426%2C320050..320162%2C319606..319936%2C319290..319505%2C318894..319163));owner=coffea | |
| 73663 chr11 manual_curation exon 32046657 32046948 . - . Parent=GSCOCT00038080001 | |
| 73664 chr11 manual_curation exon 32044200 32044469 . - . Parent=GSCOCT00038080001 | |
| 73665 chr11 manual_curation exon 32044596 32044811 . - . Parent=GSCOCT00038080001 | |
| 73666 chr11 manual_curation exon 32044912 32045242 . - . Parent=GSCOCT00038080001 | |
| 73667 chr11 manual_curation exon 32045356 32045468 . - . Parent=GSCOCT00038080001 | |
| 73668 chr11 manual_curation exon 32045582 32045732 . - . Parent=GSCOCT00038080001 | |
| 73669 chr11 manual_curation exon 32045790 32045887 . - . Parent=GSCOCT00038080001 | |
| 73670 chr11 manual_curation exon 32045987 32046108 . - . Parent=GSCOCT00038080001 | |
| 73671 chr11 manual_curation CDS 32044200 32044469 . - 0 Parent=GSCOCT00038080001 | |
| 73672 chr11 manual_curation CDS 32044596 32044811 . - 0 Parent=GSCOCT00038080001 | |
| 73673 chr11 manual_curation CDS 32044912 32045242 . - 2 Parent=GSCOCT00038080001 | |
| 73674 chr11 manual_curation CDS 32045356 32045468 . - 0 Parent=GSCOCT00038080001 | |
| 73675 chr11 manual_curation CDS 32045582 32045732 . - 2 Parent=GSCOCT00038080001 | |
| 73676 chr11 manual_curation CDS 32045790 32045887 . - 0 Parent=GSCOCT00038080001 | |
| 73677 chr11 manual_curation CDS 32045987 32046085 . - 0 Parent=GSCOCT00038080001 | |
| 73678 chr11 manual_curation gene 32053110 32053895 . + . ID=GSCOCG00038082001;Name=Cc11_g15640 | |
| 73679 chr11 manual_curation mRNA 32053110 32053895 . + . ID=GSCOCT00038082001;Parent=GSCOCG00038082001;Name=Cc11_g15640 | |
| 73680 chr11 manual_curation polypeptide 32053110 32053310 . + . ID=GSCOCP00038082001;Derives_from=GSCOCT00038082001;Name=Cc11_g15640;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038082001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=327804..328004;owner=coffea | |
| 73681 chr11 manual_curation exon 32053110 32053895 . + . Parent=GSCOCT00038082001 | |
| 73682 chr11 manual_curation CDS 32053110 32053310 . + 0 Parent=GSCOCT00038082001 | |
| 73683 chr11 manual_curation gene 32053983 32054807 . - . ID=GSCOCG00038083001;Name=Cc11_g15650 | |
| 73684 chr11 manual_curation mRNA 32053983 32054807 . - . ID=GSCOCT00038083001;Parent=GSCOCG00038083001;Name=Cc11_g15650 | |
| 73685 chr11 manual_curation polypeptide 32053983 32054807 . - . ID=GSCOCP00038083001;Dbxref=TAIR:AT1G13050.1,TAIR:AT3G26350.1,TAIR:AT4G26490.1,TrEMBL:B9HTR0,TrEMBL:B9SVN4,TrEMBL:I1KSW4;Derives_from=GSCOCT00038083001;Name=Cc11_g15650;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative LOCATED IN,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038083001~ Putative LOCATED IN: chloroplast%3B EXPRESSED IN: root%2C pedicel%2C carpel%2C stamen%3B EXPRESSED DURING: 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein%2C group 2 (InterPro:IPR004864)%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13050.1)%3B Has 3534 Blast hits to 2704 proteins in 342 species: Archae - 6%3B Bacteria - 192%3B Metazoa - 1076%3B Fungi - 505%3B Plants - 1162%3B Viruses - 224%3B Other Eukaryotes - 369 (source: NCBI BLink).~ unknown_gene~ fragment;original_location=complement(328677..329501);owner=coffea | |
| 73686 chr11 manual_curation exon 32053983 32054807 . - . Parent=GSCOCT00038083001 | |
| 73687 chr11 manual_curation CDS 32053983 32054807 . - 0 Parent=GSCOCT00038083001 | |
| 73688 chr11 manual_curation gene 32058877 32065093 . + . ID=GSCOCG00038084001;Name=Cc11_g15660 | |
| 73689 chr11 manual_curation mRNA 32058877 32065093 . + . ID=GSCOCT00038084001;Parent=GSCOCG00038084001;Name=Cc11_g15660 | |
| 73690 chr11 manual_curation polypeptide 32059112 32064694 . + . ID=GSCOCP00038084001;Dbxref=InterPro:IPR002528,PANTHER:PTHR11206,PFAM:PF01554,SwissProt:Q8GXM8,SwissProt:Q9LYT3,SwissProt:Q9SIA3,TAIR:AT1G12950.1,TAIR:AT3G26590.1,TAIR:AT5G38030.1,TIGRFAMs:TIGR00797,TrEMBL:B9N1S2,TrEMBL:B9NEN4,TrEMBL:F6H7X6;Derives_from=GSCOCT00038084001;Name=Cc11_g15660;Ontology_term=CC_evidence_code:ISS,GO:0006855,GO:0015238,GO:0015297,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein TRANSPARENT TESTA 12,CC_functional_completeness:complete,CC_gene:TT12,CC_gene:DTXL2,CC_gene:DTXL3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038084001~ Putative Protein TRANSPARENT TESTA 12~ TT12~ complete;original_location=join(333806..334162%2C334407..334948%2C336174..336260%2C338270..338326%2C338439..338677%2C338785..338903%2C338997..339083%2C339314..339388);owner=coffea | |
| 73691 chr11 manual_curation exon 32058877 32059468 . + . Parent=GSCOCT00038084001 | |
| 73692 chr11 manual_curation exon 32059713 32060254 . + . Parent=GSCOCT00038084001 | |
| 73693 chr11 manual_curation exon 32061480 32061566 . + . Parent=GSCOCT00038084001 | |
| 73694 chr11 manual_curation exon 32063576 32063632 . + . Parent=GSCOCT00038084001 | |
| 73695 chr11 manual_curation exon 32063745 32063983 . + . Parent=GSCOCT00038084001 | |
| 73696 chr11 manual_curation exon 32064091 32064209 . + . Parent=GSCOCT00038084001 | |
| 73697 chr11 manual_curation exon 32064303 32064389 . + . Parent=GSCOCT00038084001 | |
| 73698 chr11 manual_curation exon 32064620 32065093 . + . Parent=GSCOCT00038084001 | |
| 73699 chr11 manual_curation CDS 32059112 32059468 . + 0 Parent=GSCOCT00038084001 | |
| 73700 chr11 manual_curation CDS 32059713 32060254 . + 0 Parent=GSCOCT00038084001 | |
| 73701 chr11 manual_curation CDS 32061480 32061566 . + 2 Parent=GSCOCT00038084001 | |
| 73702 chr11 manual_curation CDS 32063576 32063632 . + 2 Parent=GSCOCT00038084001 | |
| 73703 chr11 manual_curation CDS 32063745 32063983 . + 2 Parent=GSCOCT00038084001 | |
| 73704 chr11 manual_curation CDS 32064091 32064209 . + 1 Parent=GSCOCT00038084001 | |
| 73705 chr11 manual_curation CDS 32064303 32064389 . + 0 Parent=GSCOCT00038084001 | |
| 73706 chr11 manual_curation CDS 32064620 32064694 . + 0 Parent=GSCOCT00038084001 | |
| 73707 chr11 manual_curation gene 32069221 32074334 . + . ID=GSCOCG00038085001;Name=Cc11_g15670 | |
| 73708 chr11 manual_curation mRNA 32069221 32074334 . + . ID=GSCOCT00038085001;Parent=GSCOCG00038085001;Name=Cc11_g15670 | |
| 73709 chr11 manual_curation polypeptide 32069380 32074135 . + . ID=GSCOCP00038085001;Dbxref=InterPro:IPR002528,PANTHER:PTHR11206,PFAM:PF01554,SwissProt:Q9LUH3,SwissProt:Q9LYT3,SwissProt:Q9SIA5,TAIR:AT1G12950.1,TAIR:AT3G26590.1,TAIR:AT5G38030.1,TIGRFAMs:TIGR00797,TrEMBL:B9N1S2,TrEMBL:B9SPK5,TrEMBL:F6H7X6;Derives_from=GSCOCT00038085001;Name=Cc11_g15670;Ontology_term=CC_evidence_code:ISS,GO:0006855,GO:0015238,GO:0015297,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein TRANSPARENT TESTA 12,CC_functional_completeness:complete,CC_gene:TT12,CC_gene:DTX1,CC_gene:LAL5;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038085001~ Putative Protein TRANSPARENT TESTA 12~ TT12~ complete;original_location=join(344074..344415%2C344765..345306%2C347558..347644%2C347725..347781%2C347907..348145%2C348217..348335%2C348478..348564%2C348749..348829);owner=coffea | |
| 73710 chr11 manual_curation exon 32069221 32069721 . + . Parent=GSCOCT00038085001 | |
| 73711 chr11 manual_curation exon 32070071 32070612 . + . Parent=GSCOCT00038085001 | |
| 73712 chr11 manual_curation exon 32072864 32072950 . + . Parent=GSCOCT00038085001 | |
| 73713 chr11 manual_curation exon 32073031 32073087 . + . Parent=GSCOCT00038085001 | |
| 73714 chr11 manual_curation exon 32073213 32073451 . + . Parent=GSCOCT00038085001 | |
| 73715 chr11 manual_curation exon 32073523 32073641 . + . Parent=GSCOCT00038085001 | |
| 73716 chr11 manual_curation exon 32073784 32073870 . + . Parent=GSCOCT00038085001 | |
| 73717 chr11 manual_curation exon 32074055 32074334 . + . Parent=GSCOCT00038085001 | |
| 73718 chr11 manual_curation CDS 32069380 32069721 . + 0 Parent=GSCOCT00038085001 | |
| 73719 chr11 manual_curation CDS 32070071 32070612 . + 0 Parent=GSCOCT00038085001 | |
| 73720 chr11 manual_curation CDS 32072864 32072950 . + 2 Parent=GSCOCT00038085001 | |
| 73721 chr11 manual_curation CDS 32073031 32073087 . + 2 Parent=GSCOCT00038085001 | |
| 73722 chr11 manual_curation CDS 32073213 32073451 . + 2 Parent=GSCOCT00038085001 | |
| 73723 chr11 manual_curation CDS 32073523 32073641 . + 1 Parent=GSCOCT00038085001 | |
| 73724 chr11 manual_curation CDS 32073784 32073870 . + 0 Parent=GSCOCT00038085001 | |
| 73725 chr11 manual_curation CDS 32074055 32074135 . + 0 Parent=GSCOCT00038085001 | |
| 73726 chr11 manual_curation gene 32075256 32080009 . + . ID=GSCOCG00038086001;Name=Cc11_g15680 | |
| 73727 chr11 manual_curation mRNA 32075256 32080009 . + . ID=GSCOCT00038086001;Parent=GSCOCG00038086001;Name=Cc11_g15680 | |
| 73728 chr11 manual_curation polypeptide 32075256 32080009 . + . ID=GSCOCP00038086001;Dbxref=InterPro:IPR002528,PANTHER:PTHR11206,PFAM:PF01554,SwissProt:Q9LUH2,SwissProt:Q9LYT3,SwissProt:Q9SIA5,TAIR:AT1G12950.1,TAIR:AT3G26590.1,TAIR:AT5G38030.1,TIGRFAMs:TIGR00797,TrEMBL:B9N1S2,TrEMBL:B9SPK5,TrEMBL:G7LJC9;Derives_from=GSCOCT00038086001;Name=Cc11_g15680;Ontology_term=CC_evidence_code:ISS,GO:0006855,GO:0015238,GO:0015297,GO:0016020,GO:0055085,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein TRANSPARENT TESTA 12,CC_functional_completeness:complete,CC_gene:TT12,CC_gene:ALF5,CC_gene:DTX1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038086001~ Putative Protein TRANSPARENT TESTA 12~ TT12~ complete;original_location=join(349950..350038%2C350140..350299%2C350578..351119%2C351323..351409%2C352082..352138%2C352230..352413%2C352675..352746%2C352988..353029%2C353571..353629%2C353687..353694%2C354128..354246%2C354347..354433%2C354632..354703);owner=coffea | |
| 73729 chr11 manual_curation exon 32075256 32075344 . + . Parent=GSCOCT00038086001 | |
| 73730 chr11 manual_curation exon 32075446 32075605 . + . Parent=GSCOCT00038086001 | |
| 73731 chr11 manual_curation exon 32075884 32076425 . + . Parent=GSCOCT00038086001 | |
| 73732 chr11 manual_curation exon 32076629 32076715 . + . Parent=GSCOCT00038086001 | |
| 73733 chr11 manual_curation exon 32077388 32077444 . + . Parent=GSCOCT00038086001 | |
| 73734 chr11 manual_curation exon 32077536 32077719 . + . Parent=GSCOCT00038086001 | |
| 73735 chr11 manual_curation exon 32077981 32078052 . + . Parent=GSCOCT00038086001 | |
| 73736 chr11 manual_curation exon 32078294 32078335 . + . Parent=GSCOCT00038086001 | |
| 73737 chr11 manual_curation exon 32078877 32078935 . + . Parent=GSCOCT00038086001 | |
| 73738 chr11 manual_curation exon 32078993 32079000 . + . Parent=GSCOCT00038086001 | |
| 73739 chr11 manual_curation exon 32079434 32079552 . + . Parent=GSCOCT00038086001 | |
| 73740 chr11 manual_curation exon 32079653 32079739 . + . Parent=GSCOCT00038086001 | |
| 73741 chr11 manual_curation exon 32079938 32080009 . + . Parent=GSCOCT00038086001 | |
| 73742 chr11 manual_curation CDS 32075256 32075344 . + 0 Parent=GSCOCT00038086001 | |
| 73743 chr11 manual_curation CDS 32075446 32075605 . + 2 Parent=GSCOCT00038086001 | |
| 73744 chr11 manual_curation CDS 32075884 32076425 . + 0 Parent=GSCOCT00038086001 | |
| 73745 chr11 manual_curation CDS 32076629 32076715 . + 2 Parent=GSCOCT00038086001 | |
| 73746 chr11 manual_curation CDS 32077388 32077444 . + 2 Parent=GSCOCT00038086001 | |
| 73747 chr11 manual_curation CDS 32077536 32077719 . + 2 Parent=GSCOCT00038086001 | |
| 73748 chr11 manual_curation CDS 32077981 32078052 . + 0 Parent=GSCOCT00038086001 | |
| 73749 chr11 manual_curation CDS 32078294 32078335 . + 0 Parent=GSCOCT00038086001 | |
| 73750 chr11 manual_curation CDS 32078877 32078935 . + 0 Parent=GSCOCT00038086001 | |
| 73751 chr11 manual_curation CDS 32078993 32079000 . + 2 Parent=GSCOCT00038086001 | |
| 73752 chr11 manual_curation CDS 32079434 32079552 . + 1 Parent=GSCOCT00038086001 | |
| 73753 chr11 manual_curation CDS 32079653 32079739 . + 0 Parent=GSCOCT00038086001 | |
| 73754 chr11 manual_curation CDS 32079938 32080009 . + 0 Parent=GSCOCT00038086001 | |
| 73755 chr11 manual_curation gene 32081166 32081805 . - . ID=GSCOCG00038087001;Name=Cc11_g15690 | |
| 73756 chr11 manual_curation mRNA 32081166 32081805 . - . ID=GSCOCT00038087001;Parent=GSCOCG00038087001;Name=Cc11_g15690 | |
| 73757 chr11 manual_curation polypeptide 32081305 32081745 . - . ID=GSCOCP00038087001;Dbxref=InterPro:IPR001196,InterPro:IPR021131,PFAM:PF00828,PROSITE:PS00475,SUPERFAMILY:SSF52080,SwissProt:P48160,SwissProt:P49637,SwissProt:Q9LR33,TAIR:AT1G12960.1,TAIR:AT1G23290.1,TAIR:AT1G70600.1,TrEMBL:A9P8T3,TrEMBL:A9PAW0,TrEMBL:B6VC54;Derives_from=GSCOCT00038087001;Name=Cc11_g15690;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:60S ribosomal protein L27a-3,CC_functional_completeness:complete,CC_gene:RPL27AC,CC_gene:RPL27AB,CC_gene:rpl27a;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038087001~ 60S ribosomal protein L27a-3~ RPL27AC~ complete;original_location=complement(355999..356439);owner=coffea | |
| 73758 chr11 manual_curation exon 32081166 32081805 . - . Parent=GSCOCT00038087001 | |
| 73759 chr11 manual_curation CDS 32081305 32081745 . - 0 Parent=GSCOCT00038087001 | |
| 73760 chr11 manual_curation gene 32083101 32086362 . - . ID=GSCOCG00038088001;Name=Cc11_g15700 | |
| 73761 chr11 manual_curation mRNA 32083101 32086362 . - . ID=GSCOCT00038088001;Parent=GSCOCG00038088001;Name=Cc11_g15700 | |
| 73762 chr11 manual_curation polypeptide 32083407 32086161 . - . ID=GSCOCP00038088001;Dbxref=InterPro:IPR013026,InterPro:IPR019734,PROFILE:PS50005,PROFILE:PS50293,SMART:SM00028,TAIR:AT3G26580.1,TrEMBL:B9SPK7,TrEMBL:F6H7X2,TrEMBL:O24366;Derives_from=GSCOCT00038088001;Name=Cc11_g15700;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Tetratricopeptide repeat (TPR)-like superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038088001~ Tetratricopeptide repeat (TPR)-like superfamily protein~ unknown_gene~ complete;original_location=complement(join(360379..360855%2C359416..359568%2C359080..359285%2C358101..358308));owner=coffea | |
| 73763 chr11 manual_curation exon 32083101 32083614 . - . Parent=GSCOCT00038088001 | |
| 73764 chr11 manual_curation exon 32084386 32084591 . - . Parent=GSCOCT00038088001 | |
| 73765 chr11 manual_curation exon 32084722 32084874 . - . Parent=GSCOCT00038088001 | |
| 73766 chr11 manual_curation exon 32085685 32086362 . - . Parent=GSCOCT00038088001 | |
| 73767 chr11 manual_curation CDS 32083407 32083614 . - 2 Parent=GSCOCT00038088001 | |
| 73768 chr11 manual_curation CDS 32084386 32084591 . - 0 Parent=GSCOCT00038088001 | |
| 73769 chr11 manual_curation CDS 32084722 32084874 . - 0 Parent=GSCOCT00038088001 | |
| 73770 chr11 manual_curation CDS 32085685 32086161 . - 0 Parent=GSCOCT00038088001 | |
| 73771 chr11 manual_curation gene 32089890 32097971 . + . ID=GSCOCG00038089001;Name=Cc11_g15710 | |
| 73772 chr11 manual_curation mRNA 32089890 32097971 . + . ID=GSCOCT00038089001;Parent=GSCOCG00038089001;Name=Cc11_g15710 | |
| 73773 chr11 manual_curation polypeptide 32089890 32097273 . + . ID=GSCOCP00038089001;Dbxref=InterPro:IPR001140,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR011527,InterPro:IPR017871,InterPro:IPR017940,PFAM:PF00005,PFAM:PF00664,PROFILE:PS50893,PROFILE:PS50929,PROSITE:PS00211,SMART:SM00382,SUPERFAMILY:SSF90123,SwissProt:Q8RY46,SwissProt:Q9JJ59,SwissProt:Q9NP78,TAIR:AT1G28010.1,TAIR:AT1G70610.1,TAIR:AT5G39040.1,TrEMBL:D7KYC5,TrEMBL:F6GZ17,TrEMBL:I1J537;Derives_from=GSCOCT00038089001;Name=Cc11_g15710;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0006810,GO:0016021,GO:0016887,GO:0017111,GO:0055085,CC_EC_number:3.6.3.44,CC_EC_number:3.6.3.44,PRODUCT:ABC transporter B family member 26%2C chloroplastic,CC_functional_completeness:complete,CC_gene:ABCB26,CC_gene:ABCB9,CC_gene:Abcb9;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038089001~ ABC transporter B family member 26%2C chloroplastic~ ABCB26~ complete;original_location=join(364584..365072%2C365865..365992%2C366273..366315%2C366668..366712%2C366814..366936%2C367038..367141%2C367606..367660%2C367743..367813%2C367951..368053%2C368747..368957%2C369204..369280%2C369410..369466%2C370219..370293%2C370615..370689%2C370767..371048%2C371129..371193%2C371316..371376%2C371881..371967);owner=coffea | |
| 73774 chr11 manual_curation exon 32089890 32090378 . + . Parent=GSCOCT00038089001 | |
| 73775 chr11 manual_curation exon 32091171 32091298 . + . Parent=GSCOCT00038089001 | |
| 73776 chr11 manual_curation exon 32091579 32091621 . + . Parent=GSCOCT00038089001 | |
| 73777 chr11 manual_curation exon 32091974 32092018 . + . Parent=GSCOCT00038089001 | |
| 73778 chr11 manual_curation exon 32092120 32092242 . + . Parent=GSCOCT00038089001 | |
| 73779 chr11 manual_curation exon 32092344 32092447 . + . Parent=GSCOCT00038089001 | |
| 73780 chr11 manual_curation exon 32092912 32092966 . + . Parent=GSCOCT00038089001 | |
| 73781 chr11 manual_curation exon 32093049 32093119 . + . Parent=GSCOCT00038089001 | |
| 73782 chr11 manual_curation exon 32093257 32093359 . + . Parent=GSCOCT00038089001 | |
| 73783 chr11 manual_curation exon 32094053 32094263 . + . Parent=GSCOCT00038089001 | |
| 73784 chr11 manual_curation exon 32094510 32094586 . + . Parent=GSCOCT00038089001 | |
| 73785 chr11 manual_curation exon 32094716 32094772 . + . Parent=GSCOCT00038089001 | |
| 73786 chr11 manual_curation exon 32095525 32095599 . + . Parent=GSCOCT00038089001 | |
| 73787 chr11 manual_curation exon 32095921 32095995 . + . Parent=GSCOCT00038089001 | |
| 73788 chr11 manual_curation exon 32096073 32096354 . + . Parent=GSCOCT00038089001 | |
| 73789 chr11 manual_curation exon 32096435 32096499 . + . Parent=GSCOCT00038089001 | |
| 73790 chr11 manual_curation exon 32096622 32096682 . + . Parent=GSCOCT00038089001 | |
| 73791 chr11 manual_curation exon 32097187 32097971 . + . Parent=GSCOCT00038089001 | |
| 73792 chr11 manual_curation CDS 32089890 32090378 . + 0 Parent=GSCOCT00038089001 | |
| 73793 chr11 manual_curation CDS 32091171 32091298 . + 0 Parent=GSCOCT00038089001 | |
| 73794 chr11 manual_curation CDS 32091579 32091621 . + 2 Parent=GSCOCT00038089001 | |
| 73795 chr11 manual_curation CDS 32091974 32092018 . + 0 Parent=GSCOCT00038089001 | |
| 73796 chr11 manual_curation CDS 32092120 32092242 . + 0 Parent=GSCOCT00038089001 | |
| 73797 chr11 manual_curation CDS 32092344 32092447 . + 0 Parent=GSCOCT00038089001 | |
| 73798 chr11 manual_curation CDS 32092912 32092966 . + 2 Parent=GSCOCT00038089001 | |
| 73799 chr11 manual_curation CDS 32093049 32093119 . + 0 Parent=GSCOCT00038089001 | |
| 73800 chr11 manual_curation CDS 32093257 32093359 . + 2 Parent=GSCOCT00038089001 | |
| 73801 chr11 manual_curation CDS 32094053 32094263 . + 0 Parent=GSCOCT00038089001 | |
| 73802 chr11 manual_curation CDS 32094510 32094586 . + 1 Parent=GSCOCT00038089001 | |
| 73803 chr11 manual_curation CDS 32094716 32094772 . + 0 Parent=GSCOCT00038089001 | |
| 73804 chr11 manual_curation CDS 32095525 32095599 . + 0 Parent=GSCOCT00038089001 | |
| 73805 chr11 manual_curation CDS 32095921 32095995 . + 0 Parent=GSCOCT00038089001 | |
| 73806 chr11 manual_curation CDS 32096073 32096354 . + 0 Parent=GSCOCT00038089001 | |
| 73807 chr11 manual_curation CDS 32096435 32096499 . + 0 Parent=GSCOCT00038089001 | |
| 73808 chr11 manual_curation CDS 32096622 32096682 . + 2 Parent=GSCOCT00038089001 | |
| 73809 chr11 manual_curation CDS 32097187 32097273 . + 0 Parent=GSCOCT00038089001 | |
| 73810 chr11 manual_curation gene 32099357 32108130 . + . ID=GSCOCG00038090001;Name=Cc11_g15720 | |
| 73811 chr11 manual_curation mRNA 32099357 32108130 . + . ID=GSCOCT00038090001;Parent=GSCOCG00038090001;Name=Cc11_g15720 | |
| 73812 chr11 manual_curation polypeptide 32099629 32107442 . + . ID=GSCOCP00038090001;Dbxref=TAIR:AT1G70620.3,TrEMBL:B9SPK9,TrEMBL:F6GZ16,TrEMBL:I1KXB2;Derives_from=GSCOCT00038090001;Name=Cc11_g15720;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038090001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(374323..374730%2C376078..376126%2C376581..376787%2C377340..377461%2C377540..377743%2C377825..378022%2C378649..378723%2C378795..378861%2C379029..379355%2C379368..380106%2C380207..380260%2C381876..381950%2C382085..382136);owner=coffea | |
| 73813 chr11 manual_curation exon 32099357 32100036 . + . Parent=GSCOCT00038090001 | |
| 73814 chr11 manual_curation exon 32101384 32101432 . + . Parent=GSCOCT00038090001 | |
| 73815 chr11 manual_curation exon 32101887 32102093 . + . Parent=GSCOCT00038090001 | |
| 73816 chr11 manual_curation exon 32102646 32102767 . + . Parent=GSCOCT00038090001 | |
| 73817 chr11 manual_curation exon 32102846 32103049 . + . Parent=GSCOCT00038090001 | |
| 73818 chr11 manual_curation exon 32103131 32103328 . + . Parent=GSCOCT00038090001 | |
| 73819 chr11 manual_curation exon 32103955 32104029 . + . Parent=GSCOCT00038090001 | |
| 73820 chr11 manual_curation exon 32104101 32104167 . + . Parent=GSCOCT00038090001 | |
| 73821 chr11 manual_curation exon 32104335 32104661 . + . Parent=GSCOCT00038090001 | |
| 73822 chr11 manual_curation exon 32104674 32105412 . + . Parent=GSCOCT00038090001 | |
| 73823 chr11 manual_curation exon 32105513 32105566 . + . Parent=GSCOCT00038090001 | |
| 73824 chr11 manual_curation exon 32107182 32107256 . + . Parent=GSCOCT00038090001 | |
| 73825 chr11 manual_curation exon 32107391 32108130 . + . Parent=GSCOCT00038090001 | |
| 73826 chr11 manual_curation CDS 32099629 32100036 . + 0 Parent=GSCOCT00038090001 | |
| 73827 chr11 manual_curation CDS 32101384 32101432 . + 0 Parent=GSCOCT00038090001 | |
| 73828 chr11 manual_curation CDS 32101887 32102093 . + 1 Parent=GSCOCT00038090001 | |
| 73829 chr11 manual_curation CDS 32102646 32102767 . + 1 Parent=GSCOCT00038090001 | |
| 73830 chr11 manual_curation CDS 32102846 32103049 . + 0 Parent=GSCOCT00038090001 | |
| 73831 chr11 manual_curation CDS 32103131 32103328 . + 0 Parent=GSCOCT00038090001 | |
| 73832 chr11 manual_curation CDS 32103955 32104029 . + 0 Parent=GSCOCT00038090001 | |
| 73833 chr11 manual_curation CDS 32104101 32104167 . + 0 Parent=GSCOCT00038090001 | |
| 73834 chr11 manual_curation CDS 32104335 32104661 . + 1 Parent=GSCOCT00038090001 | |
| 73835 chr11 manual_curation CDS 32104674 32105412 . + 1 Parent=GSCOCT00038090001 | |
| 73836 chr11 manual_curation CDS 32105513 32105566 . + 2 Parent=GSCOCT00038090001 | |
| 73837 chr11 manual_curation CDS 32107182 32107256 . + 2 Parent=GSCOCT00038090001 | |
| 73838 chr11 manual_curation CDS 32107391 32107442 . + 2 Parent=GSCOCT00038090001 | |
| 73839 chr11 manual_curation gene 32110072 32113864 . + . ID=GSCOCG00038091001;Name=Cc11_g15730 | |
| 73840 chr11 manual_curation mRNA 32110072 32113864 . + . ID=GSCOCT00038091001;Parent=GSCOCG00038091001;Name=Cc11_g15730 | |
| 73841 chr11 manual_curation polypeptide 32110072 32113864 . + . ID=GSCOCP00038091001;Dbxref=InterPro:IPR003388,InterPro:IPR005069,PANTHER:PTHR10994,PFAM:PF03407,TAIR:AT1G56550.1,TAIR:AT1G70630.1,TAIR:AT2G35610.1,TrEMBL:A5BSI0,TrEMBL:F6GZ14,TrEMBL:G7LJC4;Derives_from=GSCOCT00038091001;Name=Cc11_g15730;Ontology_term=CC_evidence_code:ISS,GO:0005783,CC_EC_number:missing_EC_number,PRODUCT:Nucleotide-diphospho-sugar transferase family protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038091001~ Nucleotide-diphospho-sugar transferase family protein~ unknown_gene~ modules;original_location=join(384766..385034%2C385431..385683%2C385762..386529%2C386724..386970%2C387222..387611%2C388026..388558);owner=coffea | |
| 73842 chr11 manual_curation exon 32110072 32110340 . + . Parent=GSCOCT00038091001 | |
| 73843 chr11 manual_curation exon 32110737 32110989 . + . Parent=GSCOCT00038091001 | |
| 73844 chr11 manual_curation exon 32111068 32111835 . + . Parent=GSCOCT00038091001 | |
| 73845 chr11 manual_curation exon 32112030 32112276 . + . Parent=GSCOCT00038091001 | |
| 73846 chr11 manual_curation exon 32112528 32112917 . + . Parent=GSCOCT00038091001 | |
| 73847 chr11 manual_curation exon 32113332 32113864 . + . Parent=GSCOCT00038091001 | |
| 73848 chr11 manual_curation CDS 32110072 32110340 . + 0 Parent=GSCOCT00038091001 | |
| 73849 chr11 manual_curation CDS 32110737 32110989 . + 2 Parent=GSCOCT00038091001 | |
| 73850 chr11 manual_curation CDS 32111068 32111835 . + 0 Parent=GSCOCT00038091001 | |
| 73851 chr11 manual_curation CDS 32112030 32112276 . + 0 Parent=GSCOCT00038091001 | |
| 73852 chr11 manual_curation CDS 32112528 32112917 . + 1 Parent=GSCOCT00038091001 | |
| 73853 chr11 manual_curation CDS 32113332 32113864 . + 1 Parent=GSCOCT00038091001 | |
| 73854 chr11 manual_curation gene 32114172 32118421 . - . ID=GSCOCG00038092001;Name=Cc11_g15740 | |
| 73855 chr11 manual_curation mRNA 32114172 32118421 . - . ID=GSCOCT00038092001;Parent=GSCOCG00038092001;Name=Cc11_g15740 | |
| 73856 chr11 manual_curation polypeptide 32114875 32117777 . - . ID=GSCOCP00038092001;Dbxref=InterPro:IPR001204,PANTHER:PTHR11101,PFAM:PF01384,SwissProt:Q38954,SwissProt:Q9UYV6,SwissProt:Q9Z7M4,TAIR:AT3G26570.1,TrEMBL:B9HLQ8,TrEMBL:F6GZ13,TrEMBL:Q6J2Q8;Derives_from=GSCOCT00038092001;Name=Cc11_g15740;Ontology_term=CC_evidence_code:ISS,GO:0005315,GO:0006817,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Inorganic phosphate transporter 2-1%2C chloroplastic,CC_functional_completeness:fragment,CC_gene:PHT2-1,CC_gene:CPn_0680,CC_gene:PYRAB14010;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038092001~ Inorganic phosphate transporter 2-1%2C chloroplastic~ PHT2-1~ fragment;original_location=complement(join(392220..392471%2C390583..390774%2C389569..390393));owner=coffea | |
| 73857 chr11 manual_curation exon 32114172 32115699 . - . Parent=GSCOCT00038092001 | |
| 73858 chr11 manual_curation exon 32115889 32116080 . - . Parent=GSCOCT00038092001 | |
| 73859 chr11 manual_curation exon 32117526 32118421 . - . Parent=GSCOCT00038092001 | |
| 73860 chr11 manual_curation CDS 32114875 32115699 . - 0 Parent=GSCOCT00038092001 | |
| 73861 chr11 manual_curation CDS 32115889 32116080 . - 0 Parent=GSCOCT00038092001 | |
| 73862 chr11 manual_curation CDS 32117526 32117777 . - 0 Parent=GSCOCT00038092001 | |
| 73863 chr11 manual_curation gene 32136390 32138985 . + . ID=GSCOCG00038093001;Name=Cc11_g15750 | |
| 73864 chr11 manual_curation mRNA 32136390 32138985 . + . ID=GSCOCT00038093001;Parent=GSCOCG00038093001;Name=Cc11_g15750 | |
| 73865 chr11 manual_curation polypeptide 32136537 32137422 . + . ID=GSCOCP00038093001;Dbxref=InterPro:IPR000270,PFAM:PF00564,SMART:SM00666,TAIR:AT1G70640.1,TAIR:AT3G48240.1,TAIR:AT5G63130.1,TrEMBL:A5B808,TrEMBL:B9HLQ7,TrEMBL:F6GZ12;Derives_from=GSCOCT00038093001;Name=Cc11_g15750;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Octicosapeptide/Phox/Bem1p family protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038093001~ Putative Octicosapeptide/Phox/Bem1p family protein~ unknown_gene~ modules;original_location=join(411231..411414%2C411587..412116);owner=coffea | |
| 73866 chr11 manual_curation exon 32136390 32136720 . + . Parent=GSCOCT00038093001 | |
| 73867 chr11 manual_curation exon 32136893 32138985 . + . Parent=GSCOCT00038093001 | |
| 73868 chr11 manual_curation CDS 32136537 32136720 . + 0 Parent=GSCOCT00038093001 | |
| 73869 chr11 manual_curation CDS 32136893 32137422 . + 1 Parent=GSCOCT00038093001 | |
| 73870 chr11 manual_curation gene 32139128 32140569 . + . ID=GSCOCG00038094001;Name=Cc11_g15760 | |
| 73871 chr11 manual_curation mRNA 32139128 32140569 . + . ID=GSCOCT00038094001;Parent=GSCOCG00038094001;Name=Cc11_g15760 | |
| 73872 chr11 manual_curation polypeptide 32140378 32140569 . + . ID=GSCOCP00038094001;Derives_from=GSCOCT00038094001;Name=Cc11_g15760;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038094001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=415072..415263;owner=coffea | |
| 73873 chr11 manual_curation exon 32139128 32140569 . + . Parent=GSCOCT00038094001 | |
| 73874 chr11 manual_curation CDS 32140378 32140569 . + 0 Parent=GSCOCT00038094001 | |
| 73875 chr11 manual_curation gene 32141981 32145589 . + . ID=GSCOCG00038095001;Name=Cc11_g15770 | |
| 73876 chr11 manual_curation mRNA 32141981 32145589 . + . ID=GSCOCT00038095001;Parent=GSCOCG00038095001;Name=Cc11_g15770 | |
| 73877 chr11 manual_curation polypeptide 32142092 32145368 . + . ID=GSCOCP00038095001;Dbxref=InterPro:IPR002672,InterPro:IPR006958,PANTHER:PTHR23405:SF4,PFAM:PF01778,PFAM:PF04874,PIR:PIRSF003352,SwissProt:Q66L33,SwissProt:Q6P7N1,SwissProt:Q7ZYG5,TAIR:AT1G23280.1,TrEMBL:B9T9U4,TrEMBL:D7SHJ7,TrEMBL:I1LS90;Derives_from=GSCOCT00038095001;Name=Cc11_g15770;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,CC_EC_number:missing_EC_number,PRODUCT:Protein MAK16 homolog B,CC_functional_completeness:complete,CC_gene:mak16-b,CC_gene:mak16-a,CC_gene:mak16;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038095001~ Protein MAK16 homolog B~ mak16-b~ complete;original_location=join(416786..416847%2C416969..417078%2C418004..418122%2C418237..418334%2C418924..419011%2C419129..419260%2C419400..419499%2C419787..419929%2C420018..420062);owner=coffea | |
| 73878 chr11 manual_curation exon 32141981 32142153 . + . Parent=GSCOCT00038095001 | |
| 73879 chr11 manual_curation exon 32142275 32142384 . + . Parent=GSCOCT00038095001 | |
| 73880 chr11 manual_curation exon 32143310 32143428 . + . Parent=GSCOCT00038095001 | |
| 73881 chr11 manual_curation exon 32143543 32143640 . + . Parent=GSCOCT00038095001 | |
| 73882 chr11 manual_curation exon 32144230 32144317 . + . Parent=GSCOCT00038095001 | |
| 73883 chr11 manual_curation exon 32144435 32144566 . + . Parent=GSCOCT00038095001 | |
| 73884 chr11 manual_curation exon 32144706 32144805 . + . Parent=GSCOCT00038095001 | |
| 73885 chr11 manual_curation exon 32145093 32145235 . + . Parent=GSCOCT00038095001 | |
| 73886 chr11 manual_curation exon 32145324 32145589 . + . Parent=GSCOCT00038095001 | |
| 73887 chr11 manual_curation CDS 32142092 32142153 . + 0 Parent=GSCOCT00038095001 | |
| 73888 chr11 manual_curation CDS 32142275 32142384 . + 2 Parent=GSCOCT00038095001 | |
| 73889 chr11 manual_curation CDS 32143310 32143428 . + 1 Parent=GSCOCT00038095001 | |
| 73890 chr11 manual_curation CDS 32143543 32143640 . + 0 Parent=GSCOCT00038095001 | |
| 73891 chr11 manual_curation CDS 32144230 32144317 . + 2 Parent=GSCOCT00038095001 | |
| 73892 chr11 manual_curation CDS 32144435 32144566 . + 0 Parent=GSCOCT00038095001 | |
| 73893 chr11 manual_curation CDS 32144706 32144805 . + 0 Parent=GSCOCT00038095001 | |
| 73894 chr11 manual_curation CDS 32145093 32145235 . + 1 Parent=GSCOCT00038095001 | |
| 73895 chr11 manual_curation CDS 32145324 32145368 . + 0 Parent=GSCOCT00038095001 | |
| 73896 chr11 manual_curation gene 32146158 32148324 . + . ID=GSCOCG00038096001;Name=Cc11_g15780 | |
| 73897 chr11 manual_curation mRNA 32146158 32148324 . + . ID=GSCOCT00038096001;Parent=GSCOCG00038096001;Name=Cc11_g15780 | |
| 73898 chr11 manual_curation polypeptide 32146499 32148018 . + . ID=GSCOCP00038096001;Dbxref=InterPro:IPR001611,InterPro:IPR003591,PFAM:PF00560,SMART:SM00369,SwissProt:O61967,SwissProt:Q80TH2,SwissProt:Q9BTT6,TAIR:AT1G12970.1,TAIR:AT3G26500.1,TAIR:AT5G05850.1,TrEMBL:B9SVK7,TrEMBL:I1J534,TrEMBL:I1JXB6;Derives_from=GSCOCT00038096001;Name=Cc11_g15780;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:3.1.3.16,PRODUCT:Putative Protein lap1,CC_functional_completeness:complete,CC_gene:let-413,CC_gene:Erbb2ip,CC_gene:LRRC1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038096001~ Putative Protein lap1~ let-413~ complete;original_location=join(421193..421393%2C421807..421973%2C422079..422712);owner=coffea | |
| 73899 chr11 manual_curation exon 32146158 32146699 . + . Parent=GSCOCT00038096001 | |
| 73900 chr11 manual_curation exon 32147113 32147279 . + . Parent=GSCOCT00038096001 | |
| 73901 chr11 manual_curation exon 32147385 32148324 . + . Parent=GSCOCT00038096001 | |
| 73902 chr11 manual_curation CDS 32146499 32146699 . + 0 Parent=GSCOCT00038096001 | |
| 73903 chr11 manual_curation CDS 32147113 32147279 . + 0 Parent=GSCOCT00038096001 | |
| 73904 chr11 manual_curation CDS 32147385 32148018 . + 2 Parent=GSCOCT00038096001 | |
| 73905 chr11 manual_curation gene 32160220 32162168 . + . ID=GSCOCG00038097001;Name=Cc11_g15790 | |
| 73906 chr11 manual_curation mRNA 32160220 32162168 . + . ID=GSCOCT00038097001;Parent=GSCOCG00038097001;Name=Cc11_g15790 | |
| 73907 chr11 manual_curation polypeptide 32160406 32161590 . + . ID=GSCOCP00038097001;Dbxref=GENE3D:G3DSA:3.30.730.10,InterPro:IPR001471,InterPro:IPR016177,PFAM:PF00847,PRINTS:PR00367,PROFILE:PS51032,SMART:SM00380,SUPERFAMILY:SSF54171,SwissProt:Q9FYK5,SwissProt:Q9M644,SwissProt:Q9SAD4,TAIR:AT1G12980.1,TAIR:AT1G24590.1,TAIR:AT5G13910.1,TrEMBL:B9HLQ6,TrEMBL:B9SVL3,TrEMBL:F6GZ11;Derives_from=GSCOCT00038097001;Name=Cc11_g15790;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003700,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:ESR2,CC_gene:ESR1,CC_gene:LEP;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038097001~ Putative uncharacterized protein~ ESR2~ complete;original_location=435100..436284;owner=coffea | |
| 73908 chr11 manual_curation exon 32160220 32162168 . + . Parent=GSCOCT00038097001 | |
| 73909 chr11 manual_curation CDS 32160406 32161590 . + 0 Parent=GSCOCT00038097001 | |
| 73910 chr11 manual_curation gene 32172165 32175205 . - . ID=GSCOCG00038100001;Name=Cc11_g15800 | |
| 73911 chr11 manual_curation mRNA 32172165 32175205 . - . ID=GSCOCT00038100001;Parent=GSCOCG00038100001;Name=Cc11_g15800 | |
| 73912 chr11 manual_curation polypeptide 32172165 32174956 . - . ID=GSCOCP00038100001;Dbxref=InterPro:IPR004249,InterPro:IPR011333,PFAM:PF03000,SUPERFAMILY:SSF54695,SwissProt:O80970,SwissProt:Q9C9V6,SwissProt:Q9LIM6,TAIR:AT1G67900.1,TAIR:AT2G14820.1,TAIR:AT3G26490.1,TrEMBL:A5BVB1,TrEMBL:B9HLQ4,TrEMBL:F6GVL5;Derives_from=GSCOCT00038100001;Name=Cc11_g15800;Ontology_term=CC_evidence_code:ISS,GO:0004871,GO:0005515,GO:0009416,CC_EC_number:missing_EC_number,PRODUCT:BTB/POZ domain-containing protein At1g67900,CC_functional_completeness:complete,CC_gene:At1g67900,CC_gene:At3g26490,CC_gene:NPY2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038100001~ BTB/POZ domain-containing protein At1g67900~ At1g67900~ complete;original_location=complement(join(449592..449650%2C449378..449447%2C447995..449254%2C446859..447350));owner=coffea | |
| 73913 chr11 manual_curation exon 32172165 32172656 . - . Parent=GSCOCT00038100001 | |
| 73914 chr11 manual_curation exon 32173301 32174560 . - . Parent=GSCOCT00038100001 | |
| 73915 chr11 manual_curation exon 32174684 32174753 . - . Parent=GSCOCT00038100001 | |
| 73916 chr11 manual_curation exon 32174898 32175205 . - . Parent=GSCOCT00038100001 | |
| 73917 chr11 manual_curation CDS 32172165 32172656 . - 0 Parent=GSCOCT00038100001 | |
| 73918 chr11 manual_curation CDS 32173301 32174560 . - 0 Parent=GSCOCT00038100001 | |
| 73919 chr11 manual_curation CDS 32174684 32174753 . - 2 Parent=GSCOCT00038100001 | |
| 73920 chr11 manual_curation CDS 32174898 32174956 . - 0 Parent=GSCOCT00038100001 | |
| 73921 chr11 manual_curation gene 32195307 32198498 . + . ID=GSCOCG00038102001;Name=Cc11_g15810 | |
| 73922 chr11 manual_curation mRNA 32195307 32198498 . + . ID=GSCOCT00038102001;Parent=GSCOCG00038102001;Name=Cc11_g15810 | |
| 73923 chr11 manual_curation polypeptide 32195788 32197958 . + . ID=GSCOCP00038102001;Dbxref=InterPro:IPR006813,PANTHER:PTHR12224,PFAM:PF04724,SwissProt:Q02527,SwissProt:Q09327,SwissProt:Q10470,TAIR:AT1G12990.1,TAIR:AT1G67880.1,TAIR:AT3G27540.1,TrEMBL:F4HP06,TrEMBL:F6GVL6,TrEMBL:Q9SAD5;Derives_from=GSCOCT00038102001;Name=Cc11_g15810;Ontology_term=CC_evidence_code:ISS,GO:0006487,GO:0016020,CC_EC_number:2.4.1.144,PRODUCT:beta-1%2C4-N-acetylglucosaminyltransferase family protein,CC_functional_completeness:complete,CC_gene:Mgat3,CC_gene:MGAT3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038102001~ beta-1%2C4-N-acetylglucosaminyltransferase family protein~ Mgat3~ complete;original_location=join(470482..470589%2C471555..472652);owner=coffea | |
| 73924 chr11 manual_curation exon 32195307 32195895 . + . Parent=GSCOCT00038102001 | |
| 73925 chr11 manual_curation exon 32196861 32198498 . + . Parent=GSCOCT00038102001 | |
| 73926 chr11 manual_curation CDS 32195788 32195895 . + 0 Parent=GSCOCT00038102001 | |
| 73927 chr11 manual_curation CDS 32196861 32197958 . + 0 Parent=GSCOCT00038102001 | |
| 73928 chr11 manual_curation gene 32202582 32203432 . + . ID=GSCOCG00038104001;Name=Cc11_g15820 | |
| 73929 chr11 manual_curation mRNA 32202582 32203432 . + . ID=GSCOCT00038104001;Parent=GSCOCG00038104001;Name=Cc11_g15820 | |
| 73930 chr11 manual_curation polypeptide 32202582 32203142 . + . ID=GSCOCP00038104001;Derives_from=GSCOCT00038104001;Name=Cc11_g15820;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038104001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=477276..477836;owner=coffea | |
| 73931 chr11 manual_curation exon 32202582 32203432 . + . Parent=GSCOCT00038104001 | |
| 73932 chr11 manual_curation CDS 32202582 32203142 . + 0 Parent=GSCOCT00038104001 | |
| 73933 chr11 manual_curation gene 32206795 32210768 . - . ID=GSCOCG00038106001;Name=Cc11_g15830 | |
| 73934 chr11 manual_curation mRNA 32206795 32210768 . - . ID=GSCOCT00038106001;Parent=GSCOCG00038106001;Name=Cc11_g15830 | |
| 73935 chr11 manual_curation polypeptide 32206795 32210768 . - . ID=GSCOCP00038106001;Dbxref=InterPro:IPR007877,PFAM:PF05212,TAIR:AT1G08040.1,TAIR:AT1G67850.1,TAIR:AT3G26440.1,TrEMBL:F6GVL9,TrEMBL:I1LNG4,TrEMBL:I1MYM9;Derives_from=GSCOCT00038106001;Name=Cc11_g15830;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF707),CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038106001~ Protein of unknown function (DUF707)~ unknown_gene~ fragment;original_location=complement(join(485408..485462%2C483616..483806%2C483246..483329%2C483045..483160%2C482837..482938%2C482645..482758%2C482445..482501%2C482283..482349%2C482090..482143%2C481841..481972%2C481750..481785%2C481489..481626));owner=coffea | |
| 73936 chr11 manual_curation exon 32206795 32206932 . - . Parent=GSCOCT00038106001 | |
| 73937 chr11 manual_curation exon 32207056 32207091 . - . Parent=GSCOCT00038106001 | |
| 73938 chr11 manual_curation exon 32207147 32207278 . - . Parent=GSCOCT00038106001 | |
| 73939 chr11 manual_curation exon 32207396 32207449 . - . Parent=GSCOCT00038106001 | |
| 73940 chr11 manual_curation exon 32207589 32207655 . - . Parent=GSCOCT00038106001 | |
| 73941 chr11 manual_curation exon 32207751 32207807 . - . Parent=GSCOCT00038106001 | |
| 73942 chr11 manual_curation exon 32207951 32208064 . - . Parent=GSCOCT00038106001 | |
| 73943 chr11 manual_curation exon 32208143 32208244 . - . Parent=GSCOCT00038106001 | |
| 73944 chr11 manual_curation exon 32208351 32208466 . - . Parent=GSCOCT00038106001 | |
| 73945 chr11 manual_curation exon 32208552 32208635 . - . Parent=GSCOCT00038106001 | |
| 73946 chr11 manual_curation exon 32208922 32209112 . - . Parent=GSCOCT00038106001 | |
| 73947 chr11 manual_curation exon 32210714 32210768 . - . Parent=GSCOCT00038106001 | |
| 73948 chr11 manual_curation CDS 32206795 32206932 . - 0 Parent=GSCOCT00038106001 | |
| 73949 chr11 manual_curation CDS 32207056 32207091 . - 0 Parent=GSCOCT00038106001 | |
| 73950 chr11 manual_curation CDS 32207147 32207278 . - 0 Parent=GSCOCT00038106001 | |
| 73951 chr11 manual_curation CDS 32207396 32207449 . - 0 Parent=GSCOCT00038106001 | |
| 73952 chr11 manual_curation CDS 32207589 32207655 . - 2 Parent=GSCOCT00038106001 | |
| 73953 chr11 manual_curation CDS 32207751 32207807 . - 2 Parent=GSCOCT00038106001 | |
| 73954 chr11 manual_curation CDS 32207951 32208064 . - 2 Parent=GSCOCT00038106001 | |
| 73955 chr11 manual_curation CDS 32208143 32208244 . - 2 Parent=GSCOCT00038106001 | |
| 73956 chr11 manual_curation CDS 32208351 32208466 . - 0 Parent=GSCOCT00038106001 | |
| 73957 chr11 manual_curation CDS 32208552 32208635 . - 0 Parent=GSCOCT00038106001 | |
| 73958 chr11 manual_curation CDS 32208922 32209112 . - 1 Parent=GSCOCT00038106001 | |
| 73959 chr11 manual_curation CDS 32210714 32210768 . - 0 Parent=GSCOCT00038106001 | |
| 73960 chr11 manual_curation gene 32212332 32216390 . - . ID=GSCOCG00038107001;Name=Cc11_g15840 | |
| 73961 chr11 manual_curation mRNA 32212332 32216390 . - . ID=GSCOCT00038107001;Parent=GSCOCG00038107001;Name=Cc11_g15840 | |
| 73962 chr11 manual_curation polypeptide 32212504 32215086 . - . ID=GSCOCP00038107001;Dbxref=InterPro:IPR007877,PFAM:PF05212,TAIR:AT1G67850.1,TAIR:AT2G28310.1,TAIR:AT3G27470.1,TrEMBL:F6GVL9,TrEMBL:I1LNG4,TrEMBL:I1MYM9;Derives_from=GSCOCT00038107001;Name=Cc11_g15840;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF707),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038107001~ Protein of unknown function (DUF707)~ unknown_gene~ complete;original_location=complement(join(489697..489780%2C489375..489527%2C488962..489066%2C488770..488853%2C488574..488689%2C488369..488470%2C488168..488284%2C487982..488038%2C487795..487861%2C487615..487668%2C487448..487522%2C487198..487347));owner=coffea | |
| 73963 chr11 manual_curation exon 32215221 32215438 . - . Parent=GSCOCT00038107001 | |
| 73964 chr11 manual_curation exon 32216354 32216390 . - . Parent=GSCOCT00038107001 | |
| 73965 chr11 manual_curation exon 32212332 32212653 . - . Parent=GSCOCT00038107001 | |
| 73966 chr11 manual_curation exon 32212754 32212828 . - . Parent=GSCOCT00038107001 | |
| 73967 chr11 manual_curation exon 32212921 32212974 . - . Parent=GSCOCT00038107001 | |
| 73968 chr11 manual_curation exon 32213101 32213167 . - . Parent=GSCOCT00038107001 | |
| 73969 chr11 manual_curation exon 32213288 32213344 . - . Parent=GSCOCT00038107001 | |
| 73970 chr11 manual_curation exon 32213474 32213590 . - . Parent=GSCOCT00038107001 | |
| 73971 chr11 manual_curation exon 32213675 32213776 . - . Parent=GSCOCT00038107001 | |
| 73972 chr11 manual_curation exon 32213880 32213995 . - . Parent=GSCOCT00038107001 | |
| 73973 chr11 manual_curation exon 32214076 32214159 . - . Parent=GSCOCT00038107001 | |
| 73974 chr11 manual_curation exon 32214268 32214372 . - . Parent=GSCOCT00038107001 | |
| 73975 chr11 manual_curation exon 32214681 32214833 . - . Parent=GSCOCT00038107001 | |
| 73976 chr11 manual_curation exon 32215003 32215114 . - . Parent=GSCOCT00038107001 | |
| 73977 chr11 manual_curation CDS 32212504 32212653 . - 0 Parent=GSCOCT00038107001 | |
| 73978 chr11 manual_curation CDS 32212754 32212828 . - 0 Parent=GSCOCT00038107001 | |
| 73979 chr11 manual_curation CDS 32212921 32212974 . - 0 Parent=GSCOCT00038107001 | |
| 73980 chr11 manual_curation CDS 32213101 32213167 . - 2 Parent=GSCOCT00038107001 | |
| 73981 chr11 manual_curation CDS 32213288 32213344 . - 2 Parent=GSCOCT00038107001 | |
| 73982 chr11 manual_curation CDS 32213474 32213590 . - 2 Parent=GSCOCT00038107001 | |
| 73983 chr11 manual_curation CDS 32213675 32213776 . - 2 Parent=GSCOCT00038107001 | |
| 73984 chr11 manual_curation CDS 32213880 32213995 . - 0 Parent=GSCOCT00038107001 | |
| 73985 chr11 manual_curation CDS 32214076 32214159 . - 0 Parent=GSCOCT00038107001 | |
| 73986 chr11 manual_curation CDS 32214268 32214372 . - 0 Parent=GSCOCT00038107001 | |
| 73987 chr11 manual_curation CDS 32214681 32214833 . - 0 Parent=GSCOCT00038107001 | |
| 73988 chr11 manual_curation CDS 32215003 32215086 . - 0 Parent=GSCOCT00038107001 | |
| 73989 chr11 manual_curation gene 32220965 32226155 . - . ID=GSCOCG00038111001;Name=Cc11_g15850 | |
| 73990 chr11 manual_curation mRNA 32220965 32226155 . - . ID=GSCOCT00038111001;Parent=GSCOCG00038111001;Name=Cc11_g15850 | |
| 73991 chr11 manual_curation polypeptide 32221450 32225870 . - . ID=GSCOCP00038111001;Dbxref=GENE3D:G3DSA:3.30.565.10,InterPro:IPR003594,PFAM:PF02518,SUPERFAMILY:SSF55874,TAIR:AT1G67840.1,TrEMBL:B9SVM1,TrEMBL:D7SMB3,TrEMBL:F4HVG8;Derives_from=GSCOCT00038111001;Name=Cc11_g15850;Ontology_term=CC_evidence_code:ISS,GO:0005524,CC_EC_number:missing_EC_number,PRODUCT:chloroplast sensor kinase,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038111001~ chloroplast sensor kinase~ unknown_gene~ complete;original_location=complement(join(500067..500564%2C499357..499521%2C498992..499276%2C498420..498485%2C498265..498333%2C498070..498162%2C497361..497542%2C496606..496882%2C496144..496395));owner=coffea | |
| 73992 chr11 manual_curation exon 32220965 32221701 . - . Parent=GSCOCT00038111001 | |
| 73993 chr11 manual_curation exon 32221912 32222188 . - . Parent=GSCOCT00038111001 | |
| 73994 chr11 manual_curation exon 32222667 32222848 . - . Parent=GSCOCT00038111001 | |
| 73995 chr11 manual_curation exon 32223376 32223468 . - . Parent=GSCOCT00038111001 | |
| 73996 chr11 manual_curation exon 32223571 32223639 . - . Parent=GSCOCT00038111001 | |
| 73997 chr11 manual_curation exon 32223726 32223791 . - . Parent=GSCOCT00038111001 | |
| 73998 chr11 manual_curation exon 32224298 32224582 . - . Parent=GSCOCT00038111001 | |
| 73999 chr11 manual_curation exon 32224663 32224827 . - . Parent=GSCOCT00038111001 | |
| 74000 chr11 manual_curation exon 32225373 32226155 . - . Parent=GSCOCT00038111001 | |
| 74001 chr11 manual_curation CDS 32221450 32221701 . - 0 Parent=GSCOCT00038111001 | |
| 74002 chr11 manual_curation CDS 32221912 32222188 . - 2 Parent=GSCOCT00038111001 | |
| 74003 chr11 manual_curation CDS 32222667 32222848 . - 0 Parent=GSCOCT00038111001 | |
| 74004 chr11 manual_curation CDS 32223376 32223468 . - 0 Parent=GSCOCT00038111001 | |
| 74005 chr11 manual_curation CDS 32223571 32223639 . - 0 Parent=GSCOCT00038111001 | |
| 74006 chr11 manual_curation CDS 32223726 32223791 . - 0 Parent=GSCOCT00038111001 | |
| 74007 chr11 manual_curation CDS 32224298 32224582 . - 0 Parent=GSCOCT00038111001 | |
| 74008 chr11 manual_curation CDS 32224663 32224827 . - 0 Parent=GSCOCT00038111001 | |
| 74009 chr11 manual_curation CDS 32225373 32225870 . - 0 Parent=GSCOCT00038111001 | |
| 74010 chr11 manual_curation gene 32227242 32230966 . + . ID=GSCOCG00038112001;Name=Cc11_g15860 | |
| 74011 chr11 manual_curation mRNA 32227242 32230966 . + . ID=GSCOCT00038112001;Parent=GSCOCG00038112001;Name=Cc11_g15860 | |
| 74012 chr11 manual_curation polypeptide 32227430 32230739 . + . ID=GSCOCP00038112001;Dbxref=GENE3D:G3DSA:3.60.40.10,InterPro:IPR000222,InterPro:IPR001932,InterPro:IPR014045,InterPro:IPR015655,PANTHER:PTHR13832,PFAM:PF00481,PROSITE:PS01032,SMART:SM00332,SUPERFAMILY:SSF81606,SwissProt:Q10MX1,SwissProt:Q8RX37,SwissProt:Q9FXE4,TAIR:AT1G07160.1,TAIR:AT1G67820.1,TAIR:AT2G30020.1,TrEMBL:B9HTS0,TrEMBL:B9SVM2,TrEMBL:F6GVM0;Derives_from=GSCOCT00038112001;Name=Cc11_g15860;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004722,GO:0006470,GO:0008287,CC_EC_number:3.1.3.16,PRODUCT:Probable protein phosphatase 2C 14,CC_functional_completeness:complete,CC_gene:At1g67820,CC_gene:At1g07160,CC_gene:Os03g0292100;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038112001~ Probable protein phosphatase 2C 14~ At1g67820~ complete;original_location=join(502124..502486%2C502631..502801%2C504159..504329%2C504420..504599%2C504996..505150%2C505223..505433);owner=coffea | |
| 74013 chr11 manual_curation exon 32227242 32227792 . + . Parent=GSCOCT00038112001 | |
| 74014 chr11 manual_curation exon 32227937 32228107 . + . Parent=GSCOCT00038112001 | |
| 74015 chr11 manual_curation exon 32229465 32229635 . + . Parent=GSCOCT00038112001 | |
| 74016 chr11 manual_curation exon 32229726 32229905 . + . Parent=GSCOCT00038112001 | |
| 74017 chr11 manual_curation exon 32230302 32230456 . + . Parent=GSCOCT00038112001 | |
| 74018 chr11 manual_curation exon 32230529 32230966 . + . Parent=GSCOCT00038112001 | |
| 74019 chr11 manual_curation CDS 32227430 32227792 . + 0 Parent=GSCOCT00038112001 | |
| 74020 chr11 manual_curation CDS 32227937 32228107 . + 0 Parent=GSCOCT00038112001 | |
| 74021 chr11 manual_curation CDS 32229465 32229635 . + 0 Parent=GSCOCT00038112001 | |
| 74022 chr11 manual_curation CDS 32229726 32229905 . + 0 Parent=GSCOCT00038112001 | |
| 74023 chr11 manual_curation CDS 32230302 32230456 . + 0 Parent=GSCOCT00038112001 | |
| 74024 chr11 manual_curation CDS 32230529 32230739 . + 2 Parent=GSCOCT00038112001 | |
| 74025 chr11 manual_curation gene 32232195 32232832 . - . ID=GSCOCG00038113001;Name=Cc11_g15870 | |
| 74026 chr11 manual_curation mRNA 32232195 32232832 . - . ID=GSCOCT00038113001;Parent=GSCOCG00038113001;Name=Cc11_g15870 | |
| 74027 chr11 manual_curation polypeptide 32232518 32232832 . - . ID=GSCOCP00038113001;Dbxref=InterPro:IPR001087,PFAM:PF00657,SwissProt:Q9FXE5,SwissProt:Q9LII9,SwissProt:Q9LIN2,TAIR:AT1G67830.1,TAIR:AT3G26430.1,TAIR:AT3G27950.1,TrEMBL:B9SVM3,TrEMBL:B9SVM4,TrEMBL:I1KSX3;Derives_from=GSCOCT00038113001;Name=Cc11_g15870;Ontology_term=CC_evidence_code:ISS,GO:0006629,CC_EC_number:missing_EC_number,PRODUCT:Uncharacterized protein,CC_functional_completeness:fragment,CC_gene:At3g26430,CC_gene:At3g27950,CC_gene:FXG1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038113001~ Uncharacterized protein~ At3g26430~ fragment;original_location=complement(507212..507526);owner=coffea | |
| 74028 chr11 manual_curation exon 32232195 32232832 . - . Parent=GSCOCT00038113001 | |
| 74029 chr11 manual_curation CDS 32232518 32232832 . - 0 Parent=GSCOCT00038113001 | |
| 74030 chr11 manual_curation gene 32234075 32237054 . - . ID=GSCOCG00038114001;Name=Cc11_g15880 | |
| 74031 chr11 manual_curation mRNA 32234075 32237054 . - . ID=GSCOCT00038114001;Parent=GSCOCG00038114001;Name=Cc11_g15880 | |
| 74032 chr11 manual_curation polypeptide 32234164 32236965 . - . ID=GSCOCP00038114001;Dbxref=InterPro:IPR001087,PFAM:PF00657,SwissProt:Q7Y1X1,SwissProt:Q9FXE5,SwissProt:Q9LIN2,TAIR:AT1G67830.1,TAIR:AT3G26430.1,TAIR:AT5G14450.1,TrEMBL:B9HTR7,TrEMBL:B9SVM4,TrEMBL:D7SMB7;Derives_from=GSCOCT00038114001;Name=Cc11_g15880;Ontology_term=CC_evidence_code:ISS,GO:0006629,CC_EC_number:missing_EC_number,PRODUCT:GDSL esterase/lipase At3g26430,CC_functional_completeness:complete,CC_gene:At3g26430,CC_gene:FXG1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038114001~ GDSL esterase/lipase At3g26430~ At3g26430~ complete;original_location=complement(join(511410..511659%2C509846..510055%2C509590..509759%2C509227..509497%2C508858..509117));owner=coffea | |
| 74033 chr11 manual_curation exon 32234075 32234423 . - . Parent=GSCOCT00038114001 | |
| 74034 chr11 manual_curation exon 32234533 32234803 . - . Parent=GSCOCT00038114001 | |
| 74035 chr11 manual_curation exon 32234896 32235065 . - . Parent=GSCOCT00038114001 | |
| 74036 chr11 manual_curation exon 32235152 32235361 . - . Parent=GSCOCT00038114001 | |
| 74037 chr11 manual_curation exon 32236716 32237054 . - . Parent=GSCOCT00038114001 | |
| 74038 chr11 manual_curation CDS 32234164 32234423 . - 1 Parent=GSCOCT00038114001 | |
| 74039 chr11 manual_curation CDS 32234533 32234803 . - 0 Parent=GSCOCT00038114001 | |
| 74040 chr11 manual_curation CDS 32234896 32235065 . - 1 Parent=GSCOCT00038114001 | |
| 74041 chr11 manual_curation CDS 32235152 32235361 . - 1 Parent=GSCOCT00038114001 | |
| 74042 chr11 manual_curation CDS 32236716 32236965 . - 0 Parent=GSCOCT00038114001 | |
| 74043 chr11 manual_curation gene 32238528 32241457 . - . ID=GSCOCG00038115001;Name=Cc11_g15890 | |
| 74044 chr11 manual_curation mRNA 32238528 32241457 . - . ID=GSCOCT00038115001;Parent=GSCOCG00038115001;Name=Cc11_g15890 | |
| 74045 chr11 manual_curation polypeptide 32238653 32241457 . - . ID=GSCOCP00038115001;Dbxref=InterPro:IPR001087,PFAM:PF00657,SwissProt:Q9LII9,SwissProt:Q9LIN2,SwissProt:Q9LY84,TAIR:AT3G26430.1,TAIR:AT3G27950.1,TAIR:AT5G14450.1,TrEMBL:B9SVM5,TrEMBL:D7SMB9,TrEMBL:F6HUT2;Derives_from=GSCOCT00038115001;Name=Cc11_g15890;Ontology_term=CC_evidence_code:ISS,GO:0006629,CC_EC_number:missing_EC_number,PRODUCT:Putative GDSL esterase/lipase At5g14450,CC_functional_completeness:complete,CC_gene:At5g14450,CC_gene:At3g26430,CC_gene:At3g27950;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038115001~ Putative GDSL esterase/lipase At5g14450~ At5g14450~ complete;original_location=complement(join(515842..516151%2C514901..515110%2C514543..514715%2C513790..514060%2C513347..513597));owner=coffea | |
| 74046 chr11 manual_curation exon 32238528 32238903 . - . Parent=GSCOCT00038115001 | |
| 74047 chr11 manual_curation exon 32239096 32239366 . - . Parent=GSCOCT00038115001 | |
| 74048 chr11 manual_curation exon 32239849 32240021 . - . Parent=GSCOCT00038115001 | |
| 74049 chr11 manual_curation exon 32240207 32240416 . - . Parent=GSCOCT00038115001 | |
| 74050 chr11 manual_curation exon 32241148 32241457 . - . Parent=GSCOCT00038115001 | |
| 74051 chr11 manual_curation CDS 32238653 32238903 . - 1 Parent=GSCOCT00038115001 | |
| 74052 chr11 manual_curation CDS 32239096 32239366 . - 0 Parent=GSCOCT00038115001 | |
| 74053 chr11 manual_curation CDS 32239849 32240021 . - 1 Parent=GSCOCT00038115001 | |
| 74054 chr11 manual_curation CDS 32240207 32240416 . - 1 Parent=GSCOCT00038115001 | |
| 74055 chr11 manual_curation CDS 32241148 32241457 . - 0 Parent=GSCOCT00038115001 | |
| 74056 chr11 manual_curation gene 32242609 32247727 . - . ID=GSCOCG00038117001;Name=Cc11_g15900 | |
| 74057 chr11 manual_curation mRNA 32242609 32247727 . - . ID=GSCOCT00038117001;Parent=GSCOCG00038117001;Name=Cc11_g15900 | |
| 74058 chr11 manual_curation polypeptide 32242847 32247658 . - . ID=GSCOCP00038117001;Dbxref=InterPro:IPR010433,PFAM:PF06273,TAIR:AT1G13020.1,TAIR:AT3G26400.1,TAIR:AT4G38710.2,TrEMBL:B9HTR6,TrEMBL:F6GVM2,TrEMBL:I1K4F5;Derives_from=GSCOCT00038117001;Name=Cc11_g15900;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:eukaryotic translation initiation factor 4B1,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038117001~ eukaryotic translation initiation factor 4B1~ unknown_gene~ complete;original_location=complement(join(521154..522352%2C518097..518486%2C517541..517565));owner=coffea | |
| 74059 chr11 manual_curation exon 32242609 32242871 . - . Parent=GSCOCT00038117001 | |
| 74060 chr11 manual_curation exon 32243403 32243792 . - . Parent=GSCOCT00038117001 | |
| 74061 chr11 manual_curation exon 32246460 32247727 . - . Parent=GSCOCT00038117001 | |
| 74062 chr11 manual_curation CDS 32242847 32242871 . - 2 Parent=GSCOCT00038117001 | |
| 74063 chr11 manual_curation CDS 32243403 32243792 . - 2 Parent=GSCOCT00038117001 | |
| 74064 chr11 manual_curation CDS 32246460 32247658 . - 0 Parent=GSCOCT00038117001 | |
| 74065 chr11 manual_curation gene 32249252 32250862 . + . ID=GSCOCG00038118001;Name=Cc11_g15910 | |
| 74066 chr11 manual_curation mRNA 32249252 32250862 . + . ID=GSCOCT00038118001;Parent=GSCOCG00038118001;Name=Cc11_g15910 | |
| 74067 chr11 manual_curation polypeptide 32249252 32249662 . + . ID=GSCOCP00038118001;Derives_from=GSCOCT00038118001;Name=Cc11_g15910;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038118001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=523946..524356;owner=coffea | |
| 74068 chr11 manual_curation exon 32249252 32250862 . + . Parent=GSCOCT00038118001 | |
| 74069 chr11 manual_curation CDS 32249252 32249662 . + 0 Parent=GSCOCT00038118001 | |
| 74070 chr11 manual_curation gene 32250943 32251132 . - . ID=GSCOCG00038119001;Name=Cc11_g15920 | |
| 74071 chr11 manual_curation mRNA 32250943 32251132 . - . ID=GSCOCT00038119001;Parent=GSCOCG00038119001;Name=Cc11_g15920 | |
| 74072 chr11 manual_curation polypeptide 32250943 32251132 . - . ID=GSCOCP00038119001;Derives_from=GSCOCT00038119001;Name=Cc11_g15920;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038119001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(525743..525826%2C525637..525660));owner=coffea | |
| 74073 chr11 manual_curation exon 32250943 32250966 . - . Parent=GSCOCT00038119001 | |
| 74074 chr11 manual_curation exon 32251049 32251132 . - . Parent=GSCOCT00038119001 | |
| 74075 chr11 manual_curation CDS 32250943 32250966 . - 0 Parent=GSCOCT00038119001 | |
| 74076 chr11 manual_curation CDS 32251049 32251132 . - 0 Parent=GSCOCT00038119001 | |
| 74077 chr11 manual_curation gene 32251202 32252640 . - . ID=GSCOCG00038120001;Name=Cc11_g15930 | |
| 74078 chr11 manual_curation mRNA 32251202 32252640 . - . ID=GSCOCT00038120001;Parent=GSCOCG00038120001;Name=Cc11_g15930 | |
| 74079 chr11 manual_curation polypeptide 32251202 32252422 . - . ID=GSCOCP00038120001;Dbxref=InterPro:IPR003808,PFAM:PF02657,SwissProt:P74523,SwissProt:Q84W65,TAIR:AT1G67810.1,TAIR:AT4G26500.1,TAIR:AT5G50210.1,TrEMBL:B9I3I0,TrEMBL:B9IF02,TrEMBL:I1K055;Derives_from=GSCOCT00038120001;Name=Cc11_g15930;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized sufE-like protein slr1419,CC_functional_completeness:modules,CC_gene:EMB1374,CC_gene:slr1419;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038120001~ Putative Uncharacterized sufE-like protein slr1419~ EMB1374~ modules;original_location=complement(join(526310..527116%2C525896..525946));owner=coffea | |
| 74080 chr11 manual_curation exon 32251202 32251252 . - . Parent=GSCOCT00038120001 | |
| 74081 chr11 manual_curation exon 32251616 32252640 . - . Parent=GSCOCT00038120001 | |
| 74082 chr11 manual_curation CDS 32251202 32251252 . - 0 Parent=GSCOCT00038120001 | |
| 74083 chr11 manual_curation CDS 32251616 32252422 . - 0 Parent=GSCOCT00038120001 | |
| 74084 chr11 manual_curation gene 32255435 32257371 . - . ID=GSCOCG00038121001;Name=Cc11_g15940 | |
| 74085 chr11 manual_curation mRNA 32255435 32257371 . - . ID=GSCOCT00038121001;Parent=GSCOCG00038121001;Name=Cc11_g15940 | |
| 74086 chr11 manual_curation polypeptide 32255870 32257371 . - . ID=GSCOCP00038121001;Dbxref=TAIR:AT3G26380.1,TrEMBL:B9HTR5,TrEMBL:B9SVM8,TrEMBL:F6GVM7;Derives_from=GSCOCT00038121001;Name=Cc11_g15940;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Melibiase family protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038121001~ Putative Melibiase family protein~ unknown_gene~ fragment;original_location=complement(join(531914..532065%2C531650..531806%2C531383..531458%2C531251..531301%2C530564..530784));owner=coffea | |
| 74087 chr11 manual_curation exon 32255435 32256090 . - . Parent=GSCOCT00038121001 | |
| 74088 chr11 manual_curation exon 32256557 32256607 . - . Parent=GSCOCT00038121001 | |
| 74089 chr11 manual_curation exon 32256689 32256764 . - . Parent=GSCOCT00038121001 | |
| 74090 chr11 manual_curation exon 32256956 32257112 . - . Parent=GSCOCT00038121001 | |
| 74091 chr11 manual_curation exon 32257220 32257371 . - . Parent=GSCOCT00038121001 | |
| 74092 chr11 manual_curation CDS 32255870 32256090 . - 1 Parent=GSCOCT00038121001 | |
| 74093 chr11 manual_curation CDS 32256557 32256607 . - 1 Parent=GSCOCT00038121001 | |
| 74094 chr11 manual_curation CDS 32256689 32256764 . - 0 Parent=GSCOCT00038121001 | |
| 74095 chr11 manual_curation CDS 32256956 32257112 . - 2 Parent=GSCOCT00038121001 | |
| 74096 chr11 manual_curation CDS 32257220 32257371 . - 0 Parent=GSCOCT00038121001 | |
| 74097 chr11 manual_curation gene 32257438 32261078 . - . ID=GSCOCG00038122001;Name=Cc11_g15950 | |
| 74098 chr11 manual_curation mRNA 32257438 32261078 . - . ID=GSCOCT00038122001;Parent=GSCOCG00038122001;Name=Cc11_g15950 | |
| 74099 chr11 manual_curation polypeptide 32257538 32260833 . - . ID=GSCOCP00038122001;Dbxref=GENE3D:G3DSA:3.20.20.70,InterPro:IPR000111,InterPro:IPR002241,InterPro:IPR013785,InterPro:IPR017853,PFAM:PF02065,PRINTS:PR00740,SUPERFAMILY:SSF51445,SwissProt:P14749,SwissProt:Q42656,SwissProt:Q9URZ0,TAIR:AT3G26380.1,TAIR:AT3G56310.1,TAIR:AT5G08380.1,TrEMBL:B9SVM8,TrEMBL:I1LNG1,TrEMBL:I1LNG2;Derives_from=GSCOCT00038122001;Name=Cc11_g15950;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0008152,CC_EC_number:3.2.1.22,PRODUCT:Putative Alpha-galactosidase,CC_functional_completeness:fragment,CC_gene:SPAC869.07c;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038122001~ Putative Alpha-galactosidase~ SPAC869.07c~ fragment;original_location=complement(join(535472..535527%2C534824..534986%2C534437..534694%2C534089..534263%2C533659..533720%2C533333..533496%2C533092..533189%2C532463..532521%2C532232..532378));owner=coffea | |
| 74100 chr11 manual_curation exon 32257438 32257684 . - . Parent=GSCOCT00038122001 | |
| 74101 chr11 manual_curation exon 32257769 32257827 . - . Parent=GSCOCT00038122001 | |
| 74102 chr11 manual_curation exon 32258398 32258495 . - . Parent=GSCOCT00038122001 | |
| 74103 chr11 manual_curation exon 32258639 32258802 . - . Parent=GSCOCT00038122001 | |
| 74104 chr11 manual_curation exon 32258965 32259026 . - . Parent=GSCOCT00038122001 | |
| 74105 chr11 manual_curation exon 32259395 32259569 . - . Parent=GSCOCT00038122001 | |
| 74106 chr11 manual_curation exon 32259743 32260000 . - . Parent=GSCOCT00038122001 | |
| 74107 chr11 manual_curation exon 32260130 32260292 . - . Parent=GSCOCT00038122001 | |
| 74108 chr11 manual_curation exon 32260778 32261078 . - . Parent=GSCOCT00038122001 | |
| 74109 chr11 manual_curation CDS 32257538 32257684 . - 0 Parent=GSCOCT00038122001 | |
| 74110 chr11 manual_curation CDS 32257769 32257827 . - 1 Parent=GSCOCT00038122001 | |
| 74111 chr11 manual_curation CDS 32258398 32258495 . - 2 Parent=GSCOCT00038122001 | |
| 74112 chr11 manual_curation CDS 32258639 32258802 . - 0 Parent=GSCOCT00038122001 | |
| 74113 chr11 manual_curation CDS 32258965 32259026 . - 1 Parent=GSCOCT00038122001 | |
| 74114 chr11 manual_curation CDS 32259395 32259569 . - 0 Parent=GSCOCT00038122001 | |
| 74115 chr11 manual_curation CDS 32259743 32260000 . - 0 Parent=GSCOCT00038122001 | |
| 74116 chr11 manual_curation CDS 32260130 32260292 . - 2 Parent=GSCOCT00038122001 | |
| 74117 chr11 manual_curation CDS 32260778 32260833 . - 0 Parent=GSCOCT00038122001 | |
| 74118 chr11 manual_curation gene 32262253 32269466 . - . ID=GSCOCG00038123001;Name=Cc11_g15960 | |
| 74119 chr11 manual_curation mRNA 32262253 32269466 . - . ID=GSCOCT00038123001;Parent=GSCOCG00038123001;Name=Cc11_g15960 | |
| 74120 chr11 manual_curation polypeptide 32262623 32269466 . - . ID=GSCOCP00038123001;Dbxref=InterPro:IPR019378,PFAM:PF10250,SwissProt:Q8W486,TAIR:AT2G01480.1,TAIR:AT3G26370.1,TAIR:AT4G24530.1,TrEMBL:B9SVM9,TrEMBL:D7SMC5,TrEMBL:I1LNG0;Derives_from=GSCOCT00038123001;Name=Cc11_g15960;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative DUF246 domain-containing protein At1g04910,CC_functional_completeness:modules,CC_gene:At1g04910;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038123001~ Putative DUF246 domain-containing protein At1g04910~ At1g04910~ modules;original_location=complement(join(543831..544160%2C542307..542357%2C542114..542204%2C540914..540990%2C540392..540480%2C539716..539835%2C539229..539345%2C538984..539127%2C538777..538900%2C538503..538694%2C537317..537676));owner=coffea | |
| 74121 chr11 manual_curation exon 32262253 32262982 . - . Parent=GSCOCT00038123001 | |
| 74122 chr11 manual_curation exon 32263809 32264000 . - . Parent=GSCOCT00038123001 | |
| 74123 chr11 manual_curation exon 32264083 32264206 . - . Parent=GSCOCT00038123001 | |
| 74124 chr11 manual_curation exon 32264290 32264433 . - . Parent=GSCOCT00038123001 | |
| 74125 chr11 manual_curation exon 32264535 32264651 . - . Parent=GSCOCT00038123001 | |
| 74126 chr11 manual_curation exon 32265022 32265141 . - . Parent=GSCOCT00038123001 | |
| 74127 chr11 manual_curation exon 32265698 32265786 . - . Parent=GSCOCT00038123001 | |
| 74128 chr11 manual_curation exon 32266220 32266296 . - . Parent=GSCOCT00038123001 | |
| 74129 chr11 manual_curation exon 32267420 32267510 . - . Parent=GSCOCT00038123001 | |
| 74130 chr11 manual_curation exon 32267613 32267663 . - . Parent=GSCOCT00038123001 | |
| 74131 chr11 manual_curation exon 32269137 32269466 . - . Parent=GSCOCT00038123001 | |
| 74132 chr11 manual_curation CDS 32262623 32262982 . - 0 Parent=GSCOCT00038123001 | |
| 74133 chr11 manual_curation CDS 32263809 32264000 . - 0 Parent=GSCOCT00038123001 | |
| 74134 chr11 manual_curation CDS 32264083 32264206 . - 2 Parent=GSCOCT00038123001 | |
| 74135 chr11 manual_curation CDS 32264290 32264433 . - 2 Parent=GSCOCT00038123001 | |
| 74136 chr11 manual_curation CDS 32264535 32264651 . - 2 Parent=GSCOCT00038123001 | |
| 74137 chr11 manual_curation CDS 32265022 32265141 . - 2 Parent=GSCOCT00038123001 | |
| 74138 chr11 manual_curation CDS 32265698 32265786 . - 0 Parent=GSCOCT00038123001 | |
| 74139 chr11 manual_curation CDS 32266220 32266296 . - 1 Parent=GSCOCT00038123001 | |
| 74140 chr11 manual_curation CDS 32267420 32267510 . - 0 Parent=GSCOCT00038123001 | |
| 74141 chr11 manual_curation CDS 32267613 32267663 . - 0 Parent=GSCOCT00038123001 | |
| 74142 chr11 manual_curation CDS 32269137 32269466 . - 0 Parent=GSCOCT00038123001 | |
| 74143 chr11 manual_curation gene 32274367 32281742 . + . ID=GSCOCG00038125001;Name=Cc11_g15970 | |
| 74144 chr11 manual_curation mRNA 32274367 32281742 . + . ID=GSCOCT00038125001;Parent=GSCOCG00038125001;Name=Cc11_g15970 | |
| 74145 chr11 manual_curation polypeptide 32274556 32281453 . + . ID=GSCOCP00038125001;Dbxref=TAIR:AT1G13030.1,TrEMBL:B9SVN1,TrEMBL:D7SMC6,TrEMBL:Q8RWK8;Derives_from=GSCOCT00038125001;Name=Cc11_g15970;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative sphere organelles protein-related,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038125001~ Putative sphere organelles protein-related~ unknown_gene~ complete;original_location=join(549250..549444%2C549871..549935%2C550072..550407%2C550547..550753%2C551238..551298%2C551731..551832%2C551914..552024%2C552102..552276%2C553349..553380%2C553933..554130%2C554722..554793%2C554885..555031%2C555195..555360%2C555815..555862%2C555966..556147);owner=coffea | |
| 74146 chr11 manual_curation exon 32274367 32274750 . + . Parent=GSCOCT00038125001 | |
| 74147 chr11 manual_curation exon 32275177 32275241 . + . Parent=GSCOCT00038125001 | |
| 74148 chr11 manual_curation exon 32275378 32275713 . + . Parent=GSCOCT00038125001 | |
| 74149 chr11 manual_curation exon 32275853 32276059 . + . Parent=GSCOCT00038125001 | |
| 74150 chr11 manual_curation exon 32276544 32276604 . + . Parent=GSCOCT00038125001 | |
| 74151 chr11 manual_curation exon 32277037 32277138 . + . Parent=GSCOCT00038125001 | |
| 74152 chr11 manual_curation exon 32277220 32277330 . + . Parent=GSCOCT00038125001 | |
| 74153 chr11 manual_curation exon 32277408 32277582 . + . Parent=GSCOCT00038125001 | |
| 74154 chr11 manual_curation exon 32278655 32278686 . + . Parent=GSCOCT00038125001 | |
| 74155 chr11 manual_curation exon 32279239 32279436 . + . Parent=GSCOCT00038125001 | |
| 74156 chr11 manual_curation exon 32280028 32280099 . + . Parent=GSCOCT00038125001 | |
| 74157 chr11 manual_curation exon 32280191 32280337 . + . Parent=GSCOCT00038125001 | |
| 74158 chr11 manual_curation exon 32280501 32280666 . + . Parent=GSCOCT00038125001 | |
| 74159 chr11 manual_curation exon 32281121 32281168 . + . Parent=GSCOCT00038125001 | |
| 74160 chr11 manual_curation exon 32281272 32281742 . + . Parent=GSCOCT00038125001 | |
| 74161 chr11 manual_curation CDS 32274556 32274750 . + 0 Parent=GSCOCT00038125001 | |
| 74162 chr11 manual_curation CDS 32275177 32275241 . + 0 Parent=GSCOCT00038125001 | |
| 74163 chr11 manual_curation CDS 32275378 32275713 . + 2 Parent=GSCOCT00038125001 | |
| 74164 chr11 manual_curation CDS 32275853 32276059 . + 2 Parent=GSCOCT00038125001 | |
| 74165 chr11 manual_curation CDS 32276544 32276604 . + 2 Parent=GSCOCT00038125001 | |
| 74166 chr11 manual_curation CDS 32277037 32277138 . + 0 Parent=GSCOCT00038125001 | |
| 74167 chr11 manual_curation CDS 32277220 32277330 . + 0 Parent=GSCOCT00038125001 | |
| 74168 chr11 manual_curation CDS 32277408 32277582 . + 0 Parent=GSCOCT00038125001 | |
| 74169 chr11 manual_curation CDS 32278655 32278686 . + 1 Parent=GSCOCT00038125001 | |
| 74170 chr11 manual_curation CDS 32279239 32279436 . + 0 Parent=GSCOCT00038125001 | |
| 74171 chr11 manual_curation CDS 32280028 32280099 . + 0 Parent=GSCOCT00038125001 | |
| 74172 chr11 manual_curation CDS 32280191 32280337 . + 0 Parent=GSCOCT00038125001 | |
| 74173 chr11 manual_curation CDS 32280501 32280666 . + 0 Parent=GSCOCT00038125001 | |
| 74174 chr11 manual_curation CDS 32281121 32281168 . + 1 Parent=GSCOCT00038125001 | |
| 74175 chr11 manual_curation CDS 32281272 32281453 . + 1 Parent=GSCOCT00038125001 | |
| 74176 chr11 manual_curation gene 32282232 32287180 . - . ID=GSCOCG00038126001;Name=Cc11_g15980 | |
| 74177 chr11 manual_curation mRNA 32282232 32287180 . - . ID=GSCOCT00038126001;Parent=GSCOCG00038126001;Name=Cc11_g15980 | |
| 74178 chr11 manual_curation polypeptide 32282911 32286354 . - . ID=GSCOCP00038126001;Dbxref=InterPro:IPR000340,InterPro:IPR000387,InterPro:IPR007122,InterPro:IPR016130,InterPro:IPR020422,PFAM:PF00782,PROFILE:PS50054,PROFILE:PS50056,PROSITE:PS00383,SMART:SM00195,SMART:SM00262,SwissProt:Q13115,SwissProt:Q9C5S1,SwissProt:Q9PW71,TAIR:AT3G06110.2,TAIR:AT3G23610.3,TAIR:AT3G55270.1,TrEMBL:F6GVM8,TrEMBL:Q3V655,TrEMBL:Q762M8;Derives_from=GSCOCT00038126001;Name=Cc11_g15980;Ontology_term=CC_evidence_code:ISS,GO:0003779,GO:0004725,GO:0006470,GO:0008138,GO:0016311,GO:0016791,CC_EC_number:3.1.3.16,CC_EC_number:3.1.3.16,PRODUCT:Putative MAPK phosphatase 2,CC_functional_completeness:modules,CC_gene:MKP1,CC_gene:DUSP4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038126001~ Putative MAPK phosphatase 2~ MKP1~ modules;original_location=complement(join(558547..561048%2C557605..557694));owner=coffea | |
| 74179 chr11 manual_curation exon 32286955 32287180 . - . Parent=GSCOCT00038126001 | |
| 74180 chr11 manual_curation exon 32282232 32283000 . - . Parent=GSCOCT00038126001 | |
| 74181 chr11 manual_curation exon 32283853 32286411 . - . Parent=GSCOCT00038126001 | |
| 74182 chr11 manual_curation CDS 32282911 32283000 . - 0 Parent=GSCOCT00038126001 | |
| 74183 chr11 manual_curation CDS 32283853 32286354 . - 0 Parent=GSCOCT00038126001 | |
| 74184 chr11 manual_curation gene 32296453 32298349 . + . ID=GSCOCG00038128001;Name=Cc11_g15990 | |
| 74185 chr11 manual_curation mRNA 32296453 32298349 . + . ID=GSCOCT00038128001;Parent=GSCOCG00038128001;Name=Cc11_g15990 | |
| 74186 chr11 manual_curation polypeptide 32297252 32297583 . + . ID=GSCOCP00038128001;Derives_from=GSCOCT00038128001;Name=Cc11_g15990;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038128001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(571946..572091%2C572175..572277);owner=coffea | |
| 74187 chr11 manual_curation exon 32296453 32296510 . + . Parent=GSCOCT00038128001 | |
| 74188 chr11 manual_curation exon 32296816 32296920 . + . Parent=GSCOCT00038128001 | |
| 74189 chr11 manual_curation exon 32297139 32297397 . + . Parent=GSCOCT00038128001 | |
| 74190 chr11 manual_curation exon 32297481 32298349 . + . Parent=GSCOCT00038128001 | |
| 74191 chr11 manual_curation CDS 32297252 32297397 . + 0 Parent=GSCOCT00038128001 | |
| 74192 chr11 manual_curation CDS 32297481 32297583 . + 2 Parent=GSCOCT00038128001 | |
| 74193 chr11 manual_curation gene 32299762 32300789 . + . ID=GSCOCG00038129001;Name=Cc11_g16000 | |
| 74194 chr11 manual_curation mRNA 32299762 32300789 . + . ID=GSCOCT00038129001;Parent=GSCOCG00038129001;Name=Cc11_g16000 | |
| 74195 chr11 manual_curation polypeptide 32299833 32300789 . + . ID=GSCOCP00038129001;Dbxref=TAIR:AT1G13050.1,TAIR:AT3G26350.1,TAIR:AT4G26490.1,TrEMBL:B9HTR0,TrEMBL:B9SVN4,TrEMBL:I1KSW4;Derives_from=GSCOCT00038129001;Name=Cc11_g16000;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038129001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=574527..575483;owner=coffea | |
| 74196 chr11 manual_curation exon 32299762 32300789 . + . Parent=GSCOCT00038129001 | |
| 74197 chr11 manual_curation CDS 32299833 32300789 . + 0 Parent=GSCOCT00038129001 | |
| 74198 chr11 manual_curation gene 32301299 32306240 . - . ID=GSCOCG00038130001;Name=Cc11_g16010 | |
| 74199 chr11 manual_curation mRNA 32301299 32306240 . - . ID=GSCOCT00038130001;Parent=GSCOCG00038130001;Name=Cc11_g16010 | |
| 74200 chr11 manual_curation polypeptide 32301605 32306135 . - . ID=GSCOCP00038130001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:P51566,SwissProt:P51567,SwissProt:P51568,TAIR:AT3G53570.1,TAIR:AT4G24740.1,TAIR:AT4G32660.1,TrEMBL:B9SVN5,TrEMBL:D7SMD0,TrEMBL:O49967;Derives_from=GSCOCT00038130001;Name=Cc11_g16010;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.12.1,PRODUCT:Serine/threonine-protein kinase AFC2,CC_functional_completeness:complete,CC_gene:AFC2,CC_gene:AFC1,CC_gene:AFC3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038130001~ Serine/threonine-protein kinase AFC2~ AFC2~ complete;original_location=complement(join(580737..580829%2C579358..579544%2C578714..578740%2C578129..578282%2C577980..578028%2C577782..577896%2C577454..577545%2C577116..577281%2C576967..577031%2C576751..576848%2C576559..576661%2C576299..576448));owner=coffea | |
| 74201 chr11 manual_curation exon 32301299 32301754 . - . Parent=GSCOCT00038130001 | |
| 74202 chr11 manual_curation exon 32301865 32301967 . - . Parent=GSCOCT00038130001 | |
| 74203 chr11 manual_curation exon 32302057 32302154 . - . Parent=GSCOCT00038130001 | |
| 74204 chr11 manual_curation exon 32302273 32302337 . - . Parent=GSCOCT00038130001 | |
| 74205 chr11 manual_curation exon 32302422 32302587 . - . Parent=GSCOCT00038130001 | |
| 74206 chr11 manual_curation exon 32302760 32302851 . - . Parent=GSCOCT00038130001 | |
| 74207 chr11 manual_curation exon 32303088 32303202 . - . Parent=GSCOCT00038130001 | |
| 74208 chr11 manual_curation exon 32303286 32303334 . - . Parent=GSCOCT00038130001 | |
| 74209 chr11 manual_curation exon 32303435 32303588 . - . Parent=GSCOCT00038130001 | |
| 74210 chr11 manual_curation exon 32304020 32304046 . - . Parent=GSCOCT00038130001 | |
| 74211 chr11 manual_curation exon 32304664 32304850 . - . Parent=GSCOCT00038130001 | |
| 74212 chr11 manual_curation exon 32306043 32306240 . - . Parent=GSCOCT00038130001 | |
| 74213 chr11 manual_curation CDS 32301605 32301754 . - 0 Parent=GSCOCT00038130001 | |
| 74214 chr11 manual_curation CDS 32301865 32301967 . - 2 Parent=GSCOCT00038130001 | |
| 74215 chr11 manual_curation CDS 32302057 32302154 . - 0 Parent=GSCOCT00038130001 | |
| 74216 chr11 manual_curation CDS 32302273 32302337 . - 1 Parent=GSCOCT00038130001 | |
| 74217 chr11 manual_curation CDS 32302422 32302587 . - 0 Parent=GSCOCT00038130001 | |
| 74218 chr11 manual_curation CDS 32302760 32302851 . - 1 Parent=GSCOCT00038130001 | |
| 74219 chr11 manual_curation CDS 32303088 32303202 . - 0 Parent=GSCOCT00038130001 | |
| 74220 chr11 manual_curation CDS 32303286 32303334 . - 2 Parent=GSCOCT00038130001 | |
| 74221 chr11 manual_curation CDS 32303435 32303588 . - 1 Parent=GSCOCT00038130001 | |
| 74222 chr11 manual_curation CDS 32304020 32304046 . - 1 Parent=GSCOCT00038130001 | |
| 74223 chr11 manual_curation CDS 32304664 32304850 . - 0 Parent=GSCOCT00038130001 | |
| 74224 chr11 manual_curation CDS 32306043 32306135 . - 0 Parent=GSCOCT00038130001 | |
| 74225 chr11 manual_curation gene 32307278 32312950 . - . ID=GSCOCG00038131001;Name=Cc11_g16020 | |
| 74226 chr11 manual_curation mRNA 32307278 32312950 . - . ID=GSCOCT00038131001;Parent=GSCOCG00038131001;Name=Cc11_g16020 | |
| 74227 chr11 manual_curation polypeptide 32307581 32312455 . - . ID=GSCOCP00038131001;Dbxref=SwissProt:Q5XVA8,TAIR:AT1G24560.1,TAIR:AT3G49055.1,TrEMBL:B9HTQ6,TrEMBL:B9RMU3,TrEMBL:F6GVN4;Derives_from=GSCOCT00038131001;Name=Cc11_g16020;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:At3g49055;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038131001~ unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49055.1)%3B Has 71940 Blast hits to 38124 proteins in 2481 species: Archae - 1358%3B Bacteria - 12126%3B Metazoa - 32861%3B Fungi - 6786%3B Plants - 4024%3B Viruses - 195%3B Other Eukaryotes - 14590 (source: NCBI BLink).~ At3g49055~ complete;original_location=complement(join(585752..587149%2C585578..585654%2C584969..585080%2C584697..584813%2C582275..582628));owner=coffea | |
| 74228 chr11 manual_curation exon 32307278 32307934 . - . Parent=GSCOCT00038131001 | |
| 74229 chr11 manual_curation exon 32310003 32310119 . - . Parent=GSCOCT00038131001 | |
| 74230 chr11 manual_curation exon 32310275 32310386 . - . Parent=GSCOCT00038131001 | |
| 74231 chr11 manual_curation exon 32310884 32310960 . - . Parent=GSCOCT00038131001 | |
| 74232 chr11 manual_curation exon 32311058 32312950 . - . Parent=GSCOCT00038131001 | |
| 74233 chr11 manual_curation CDS 32307581 32307934 . - 0 Parent=GSCOCT00038131001 | |
| 74234 chr11 manual_curation CDS 32310003 32310119 . - 0 Parent=GSCOCT00038131001 | |
| 74235 chr11 manual_curation CDS 32310275 32310386 . - 2 Parent=GSCOCT00038131001 | |
| 74236 chr11 manual_curation CDS 32310884 32310960 . - 0 Parent=GSCOCT00038131001 | |
| 74237 chr11 manual_curation CDS 32311058 32312455 . - 0 Parent=GSCOCT00038131001 | |
| 74238 chr11 manual_curation gene 32313937 32317790 . + . ID=GSCOCG00038132001;Name=Cc11_g16030 | |
| 74239 chr11 manual_curation mRNA 32313937 32317790 . + . ID=GSCOCT00038132001;Parent=GSCOCG00038132001;Name=Cc11_g16030 | |
| 74240 chr11 manual_curation polypeptide 32314179 32316956 . + . ID=GSCOCP00038132001;Dbxref=InterPro:IPR001841,InterPro:IPR002035,InterPro:IPR010734,PFAM:PF07002,PROFILE:PS50089,SMART:SM00327,SwissProt:Q09221,SwissProt:Q9LY87,SwissProt:Q9SS90,TAIR:AT1G67800.2,TAIR:AT3G01650.1,TAIR:AT5G14420.1,TrEMBL:D7SMD7,TrEMBL:G7J349,TrEMBL:G7J350;Derives_from=GSCOCT00038132001;Name=Cc11_g16030;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:E3 ubiquitin-protein ligase RGLG1,CC_functional_completeness:fragment,CC_gene:RGLG1,CC_gene:RGLG2,CC_gene:cpna-2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038132001~ E3 ubiquitin-protein ligase RGLG1~ RGLG1~ fragment;original_location=join(588873..589100%2C589189..589273%2C589348..589488%2C589576..589689%2C589776..589873%2C590166..590245%2C590325..590430%2C590560..590687%2C590768..590942%2C591419..591475%2C591567..591650);owner=coffea | |
| 74241 chr11 manual_curation exon 32313937 32314068 . + . Parent=GSCOCT00038132001 | |
| 74242 chr11 manual_curation exon 32314162 32314406 . + . Parent=GSCOCT00038132001 | |
| 74243 chr11 manual_curation exon 32314495 32314579 . + . Parent=GSCOCT00038132001 | |
| 74244 chr11 manual_curation exon 32314654 32314794 . + . Parent=GSCOCT00038132001 | |
| 74245 chr11 manual_curation exon 32314882 32314995 . + . Parent=GSCOCT00038132001 | |
| 74246 chr11 manual_curation exon 32315082 32315179 . + . Parent=GSCOCT00038132001 | |
| 74247 chr11 manual_curation exon 32315472 32315551 . + . Parent=GSCOCT00038132001 | |
| 74248 chr11 manual_curation exon 32315631 32315736 . + . Parent=GSCOCT00038132001 | |
| 74249 chr11 manual_curation exon 32315866 32315993 . + . Parent=GSCOCT00038132001 | |
| 74250 chr11 manual_curation exon 32316074 32316248 . + . Parent=GSCOCT00038132001 | |
| 74251 chr11 manual_curation exon 32316725 32316781 . + . Parent=GSCOCT00038132001 | |
| 74252 chr11 manual_curation exon 32316873 32317790 . + . Parent=GSCOCT00038132001 | |
| 74253 chr11 manual_curation CDS 32314179 32314406 . + 0 Parent=GSCOCT00038132001 | |
| 74254 chr11 manual_curation CDS 32314495 32314579 . + 0 Parent=GSCOCT00038132001 | |
| 74255 chr11 manual_curation CDS 32314654 32314794 . + 1 Parent=GSCOCT00038132001 | |
| 74256 chr11 manual_curation CDS 32314882 32314995 . + 1 Parent=GSCOCT00038132001 | |
| 74257 chr11 manual_curation CDS 32315082 32315179 . + 1 Parent=GSCOCT00038132001 | |
| 74258 chr11 manual_curation CDS 32315472 32315551 . + 0 Parent=GSCOCT00038132001 | |
| 74259 chr11 manual_curation CDS 32315631 32315736 . + 2 Parent=GSCOCT00038132001 | |
| 74260 chr11 manual_curation CDS 32315866 32315993 . + 0 Parent=GSCOCT00038132001 | |
| 74261 chr11 manual_curation CDS 32316074 32316248 . + 2 Parent=GSCOCT00038132001 | |
| 74262 chr11 manual_curation CDS 32316725 32316781 . + 0 Parent=GSCOCT00038132001 | |
| 74263 chr11 manual_curation CDS 32316873 32316956 . + 0 Parent=GSCOCT00038132001 | |
| 74264 chr11 manual_curation gene 32318010 32325541 . - . ID=GSCOCG00038133001;Name=Cc11_g16040 | |
| 74265 chr11 manual_curation mRNA 32318010 32325541 . - . ID=GSCOCT00038133001;Parent=GSCOCG00038133001;Name=Cc11_g16040 | |
| 74266 chr11 manual_curation polypeptide 32318010 32325541 . - . ID=GSCOCP00038133001;Dbxref=InterPro:IPR012476,PANTHER:PTHR12960,PFAM:PF07817,SwissProt:Q53GS7,SwissProt:Q5RAS2,SwissProt:Q6DRB1,TAIR:AT1G13120.1,TAIR:AT4G05523.1,TrEMBL:A5C5D0,TrEMBL:B9RMT7,TrEMBL:I1LNF4;Derives_from=GSCOCT00038133001;Name=Cc11_g16040;Ontology_term=CC_evidence_code:ISS,GO:0005643,GO:0016973,CC_EC_number:missing_EC_number,PRODUCT:Putative embryo defective 1745,CC_functional_completeness:complete,CC_gene:GLE1,CC_gene:gle1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038133001~ Putative embryo defective 1745~ GLE1~ complete;original_location=complement(join(600213..600235%2C599455..599625%2C599310..599329%2C599223..599274%2C598926..599093%2C598620..598781%2C597806..597926%2C597116..597264%2C596650..596821%2C595904..596108%2C595302..595402%2C594871..594941%2C594578..594659%2C594329..594415%2C593722..593805%2C593214..593345%2C593012..593134%2C592704..592925));owner=coffea | |
| 74267 chr11 manual_curation exon 32318010 32318231 . - . Parent=GSCOCT00038133001 | |
| 74268 chr11 manual_curation exon 32318318 32318440 . - . Parent=GSCOCT00038133001 | |
| 74269 chr11 manual_curation exon 32318520 32318651 . - . Parent=GSCOCT00038133001 | |
| 74270 chr11 manual_curation exon 32319028 32319111 . - . Parent=GSCOCT00038133001 | |
| 74271 chr11 manual_curation exon 32319635 32319721 . - . Parent=GSCOCT00038133001 | |
| 74272 chr11 manual_curation exon 32319884 32319965 . - . Parent=GSCOCT00038133001 | |
| 74273 chr11 manual_curation exon 32320177 32320247 . - . Parent=GSCOCT00038133001 | |
| 74274 chr11 manual_curation exon 32320608 32320708 . - . Parent=GSCOCT00038133001 | |
| 74275 chr11 manual_curation exon 32321210 32321414 . - . Parent=GSCOCT00038133001 | |
| 74276 chr11 manual_curation exon 32321956 32322127 . - . Parent=GSCOCT00038133001 | |
| 74277 chr11 manual_curation exon 32322422 32322570 . - . Parent=GSCOCT00038133001 | |
| 74278 chr11 manual_curation exon 32323112 32323232 . - . Parent=GSCOCT00038133001 | |
| 74279 chr11 manual_curation exon 32323926 32324087 . - . Parent=GSCOCT00038133001 | |
| 74280 chr11 manual_curation exon 32324232 32324399 . - . Parent=GSCOCT00038133001 | |
| 74281 chr11 manual_curation exon 32324529 32324580 . - . Parent=GSCOCT00038133001 | |
| 74282 chr11 manual_curation exon 32324616 32324635 . - . Parent=GSCOCT00038133001 | |
| 74283 chr11 manual_curation exon 32324761 32324931 . - . Parent=GSCOCT00038133001 | |
| 74284 chr11 manual_curation exon 32325519 32325541 . - . Parent=GSCOCT00038133001 | |
| 74285 chr11 manual_curation CDS 32318010 32318231 . - 0 Parent=GSCOCT00038133001 | |
| 74286 chr11 manual_curation CDS 32318318 32318440 . - 0 Parent=GSCOCT00038133001 | |
| 74287 chr11 manual_curation CDS 32318520 32318651 . - 0 Parent=GSCOCT00038133001 | |
| 74288 chr11 manual_curation CDS 32319028 32319111 . - 0 Parent=GSCOCT00038133001 | |
| 74289 chr11 manual_curation CDS 32319635 32319721 . - 0 Parent=GSCOCT00038133001 | |
| 74290 chr11 manual_curation CDS 32319884 32319965 . - 2 Parent=GSCOCT00038133001 | |
| 74291 chr11 manual_curation CDS 32320177 32320247 . - 0 Parent=GSCOCT00038133001 | |
| 74292 chr11 manual_curation CDS 32320608 32320708 . - 1 Parent=GSCOCT00038133001 | |
| 74293 chr11 manual_curation CDS 32321210 32321414 . - 0 Parent=GSCOCT00038133001 | |
| 74294 chr11 manual_curation CDS 32321956 32322127 . - 2 Parent=GSCOCT00038133001 | |
| 74295 chr11 manual_curation CDS 32322422 32322570 . - 0 Parent=GSCOCT00038133001 | |
| 74296 chr11 manual_curation CDS 32323112 32323232 . - 2 Parent=GSCOCT00038133001 | |
| 74297 chr11 manual_curation CDS 32323926 32324087 . - 2 Parent=GSCOCT00038133001 | |
| 74298 chr11 manual_curation CDS 32324232 32324399 . - 2 Parent=GSCOCT00038133001 | |
| 74299 chr11 manual_curation CDS 32324529 32324580 . - 1 Parent=GSCOCT00038133001 | |
| 74300 chr11 manual_curation CDS 32324616 32324635 . - 2 Parent=GSCOCT00038133001 | |
| 74301 chr11 manual_curation CDS 32324761 32324931 . - 2 Parent=GSCOCT00038133001 | |
| 74302 chr11 manual_curation CDS 32325519 32325541 . - 0 Parent=GSCOCT00038133001 | |
| 74303 chr11 manual_curation gene 32329613 32333214 . + . ID=GSCOCG00038134001;Name=Cc11_g16050 | |
| 74304 chr11 manual_curation mRNA 32329613 32333214 . + . ID=GSCOCT00038134001;Parent=GSCOCG00038134001;Name=Cc11_g16050 | |
| 74305 chr11 manual_curation polypeptide 32329860 32332979 . + . ID=GSCOCP00038134001;Dbxref=GENE3D:G3DSA:3.20.20.80,InterPro:IPR001547,InterPro:IPR013781,InterPro:IPR017853,PFAM:PF00150,SUPERFAMILY:SSF51445,TAIR:AT1G13130.1,TAIR:AT3G26130.1,TAIR:AT3G26140.1,TrEMBL:B9HLD8,TrEMBL:B9HTQ3,TrEMBL:B9RMT6;Derives_from=GSCOCT00038134001;Name=Cc11_g16050;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005975,GO:0043169,CC_EC_number:missing_EC_number,PRODUCT:Cellulase (glycosyl hydrolase family 5) protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038134001~ Cellulase (glycosyl hydrolase family 5) protein~ unknown_gene~ complete;original_location=join(604554..604886%2C605854..606101%2C606565..607085%2C607162..607673);owner=coffea | |
| 74306 chr11 manual_curation exon 32329613 32330192 . + . Parent=GSCOCT00038134001 | |
| 74307 chr11 manual_curation exon 32331160 32331407 . + . Parent=GSCOCT00038134001 | |
| 74308 chr11 manual_curation exon 32331871 32332391 . + . Parent=GSCOCT00038134001 | |
| 74309 chr11 manual_curation exon 32332468 32333214 . + . Parent=GSCOCT00038134001 | |
| 74310 chr11 manual_curation CDS 32329860 32330192 . + 0 Parent=GSCOCT00038134001 | |
| 74311 chr11 manual_curation CDS 32331160 32331407 . + 0 Parent=GSCOCT00038134001 | |
| 74312 chr11 manual_curation CDS 32331871 32332391 . + 2 Parent=GSCOCT00038134001 | |
| 74313 chr11 manual_curation CDS 32332468 32332979 . + 1 Parent=GSCOCT00038134001 | |
| 74314 chr11 manual_curation gene 32334007 32337275 . - . ID=GSCOCG00038135001;Name=Cc11_g16060 | |
| 74315 chr11 manual_curation mRNA 32334007 32337275 . - . ID=GSCOCT00038135001;Parent=GSCOCG00038135001;Name=Cc11_g16060 | |
| 74316 chr11 manual_curation polypeptide 32334174 32336947 . - . ID=GSCOCP00038135001;Dbxref=InterPro:IPR000243,InterPro:IPR001353,InterPro:IPR016050,PFAM:PF00227,PRINTS:PR00141,PROSITE:PS00854,SwissProt:O23710,SwissProt:Q7DLS1,SwissProt:Q99436,TAIR:AT3G27430.2,TAIR:AT4G31300.2,TAIR:AT5G40580.1,TrEMBL:D7LPH0,TrEMBL:D7MJ59,TrEMBL:D7SME1;Derives_from=GSCOCT00038135001;Name=Cc11_g16060;Ontology_term=CC_evidence_code:ISS,GO:0004175,GO:0004298,GO:0005839,GO:0051603,CC_EC_number:3.4.25.1,PRODUCT:Proteasome subunit beta type-7-B,CC_functional_completeness:complete,CC_gene:PBB2,CC_gene:PBB1,CC_gene:PSMB7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038135001~ Proteasome subunit beta type-7-B~ PBB2~ complete;original_location=complement(join(611498..611641%2C610214..610355%2C609791..609887%2C609635..609704%2C609444..609548%2C609261..609359%2C609070..609157%2C608868..608944));owner=coffea | |
| 74317 chr11 manual_curation exon 32337146 32337275 . - . Parent=GSCOCT00038135001 | |
| 74318 chr11 manual_curation exon 32334007 32334250 . - . Parent=GSCOCT00038135001 | |
| 74319 chr11 manual_curation exon 32334376 32334463 . - . Parent=GSCOCT00038135001 | |
| 74320 chr11 manual_curation exon 32334567 32334665 . - . Parent=GSCOCT00038135001 | |
| 74321 chr11 manual_curation exon 32334750 32334854 . - . Parent=GSCOCT00038135001 | |
| 74322 chr11 manual_curation exon 32334941 32335010 . - . Parent=GSCOCT00038135001 | |
| 74323 chr11 manual_curation exon 32335097 32335193 . - . Parent=GSCOCT00038135001 | |
| 74324 chr11 manual_curation exon 32335520 32335661 . - . Parent=GSCOCT00038135001 | |
| 74325 chr11 manual_curation exon 32336804 32336973 . - . Parent=GSCOCT00038135001 | |
| 74326 chr11 manual_curation CDS 32334174 32334250 . - 1 Parent=GSCOCT00038135001 | |
| 74327 chr11 manual_curation CDS 32334376 32334463 . - 0 Parent=GSCOCT00038135001 | |
| 74328 chr11 manual_curation CDS 32334567 32334665 . - 0 Parent=GSCOCT00038135001 | |
| 74329 chr11 manual_curation CDS 32334750 32334854 . - 0 Parent=GSCOCT00038135001 | |
| 74330 chr11 manual_curation CDS 32334941 32335010 . - 2 Parent=GSCOCT00038135001 | |
| 74331 chr11 manual_curation CDS 32335097 32335193 . - 1 Parent=GSCOCT00038135001 | |
| 74332 chr11 manual_curation CDS 32335520 32335661 . - 0 Parent=GSCOCT00038135001 | |
| 74333 chr11 manual_curation CDS 32336804 32336947 . - 0 Parent=GSCOCT00038135001 | |
| 74334 chr11 manual_curation gene 32342051 32345467 . + . ID=GSCOCG00038138001;Name=Cc11_g16070 | |
| 74335 chr11 manual_curation mRNA 32342051 32345467 . + . ID=GSCOCT00038138001;Parent=GSCOCG00038138001;Name=Cc11_g16070 | |
| 74336 chr11 manual_curation polypeptide 32342123 32345331 . + . ID=GSCOCP00038138001;Dbxref=TAIR:AT1G67790.1,TAIR:AT3G01670.1,TAIR:AT3G01680.1,TrEMBL:A5AVK0,TrEMBL:B9RMT3,TrEMBL:F6GVP2;Derives_from=GSCOCT00038138001;Name=Cc11_g16070;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038138001~ Putative unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01680.1)%3B Has 208 Blast hits to 125 proteins in 13 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 208%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(616817..616993%2C617505..617597%2C617679..618122%2C618292..618337%2C618489..618616%2C618817..619305%2C619408..620025);owner=coffea | |
| 74337 chr11 manual_curation exon 32342051 32342299 . + . Parent=GSCOCT00038138001 | |
| 74338 chr11 manual_curation exon 32342811 32342903 . + . Parent=GSCOCT00038138001 | |
| 74339 chr11 manual_curation exon 32342985 32343428 . + . Parent=GSCOCT00038138001 | |
| 74340 chr11 manual_curation exon 32343598 32343643 . + . Parent=GSCOCT00038138001 | |
| 74341 chr11 manual_curation exon 32343795 32343922 . + . Parent=GSCOCT00038138001 | |
| 74342 chr11 manual_curation exon 32344123 32344611 . + . Parent=GSCOCT00038138001 | |
| 74343 chr11 manual_curation exon 32344714 32345467 . + . Parent=GSCOCT00038138001 | |
| 74344 chr11 manual_curation CDS 32342123 32342299 . + 0 Parent=GSCOCT00038138001 | |
| 74345 chr11 manual_curation CDS 32342811 32342903 . + 0 Parent=GSCOCT00038138001 | |
| 74346 chr11 manual_curation CDS 32342985 32343428 . + 0 Parent=GSCOCT00038138001 | |
| 74347 chr11 manual_curation CDS 32343598 32343643 . + 0 Parent=GSCOCT00038138001 | |
| 74348 chr11 manual_curation CDS 32343795 32343922 . + 1 Parent=GSCOCT00038138001 | |
| 74349 chr11 manual_curation CDS 32344123 32344611 . + 0 Parent=GSCOCT00038138001 | |
| 74350 chr11 manual_curation CDS 32344714 32345331 . + 0 Parent=GSCOCT00038138001 | |
| 74351 chr11 manual_curation gene 32347407 32351308 . + . ID=GSCOCG00038139001;Name=Cc11_g16080 | |
| 74352 chr11 manual_curation mRNA 32347407 32351308 . + . ID=GSCOCT00038139001;Parent=GSCOCG00038139001;Name=Cc11_g16080 | |
| 74353 chr11 manual_curation polypeptide 32347407 32351019 . + . ID=GSCOCP00038139001;Dbxref=InterPro:IPR021640,PFAM:PF11594,TAIR:AT1G67790.1,TAIR:AT3G01670.1,TAIR:AT3G01680.1,TrEMBL:B9RMT2,TrEMBL:D7SME4,TrEMBL:E2FKK0;Derives_from=GSCOCT00038139001;Name=Cc11_g16080;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative CONTAINS InterPro DOMAIN/s,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038139001~ Putative CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640)%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01670.1)%3B Has 122 Blast hits to 112 proteins in 13 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 122%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(622101..622613%2C622757..622867%2C623130..623578%2C623970..624079%2C624207..624349%2C624444..624935%2C625093..625713);owner=coffea | |
| 74354 chr11 manual_curation exon 32347407 32347919 . + . Parent=GSCOCT00038139001 | |
| 74355 chr11 manual_curation exon 32348063 32348173 . + . Parent=GSCOCT00038139001 | |
| 74356 chr11 manual_curation exon 32348436 32348884 . + . Parent=GSCOCT00038139001 | |
| 74357 chr11 manual_curation exon 32349276 32349385 . + . Parent=GSCOCT00038139001 | |
| 74358 chr11 manual_curation exon 32349513 32349655 . + . Parent=GSCOCT00038139001 | |
| 74359 chr11 manual_curation exon 32349750 32350241 . + . Parent=GSCOCT00038139001 | |
| 74360 chr11 manual_curation exon 32350399 32351308 . + . Parent=GSCOCT00038139001 | |
| 74361 chr11 manual_curation CDS 32347407 32347919 . + 0 Parent=GSCOCT00038139001 | |
| 74362 chr11 manual_curation CDS 32348063 32348173 . + 0 Parent=GSCOCT00038139001 | |
| 74363 chr11 manual_curation CDS 32348436 32348884 . + 0 Parent=GSCOCT00038139001 | |
| 74364 chr11 manual_curation CDS 32349276 32349385 . + 2 Parent=GSCOCT00038139001 | |
| 74365 chr11 manual_curation CDS 32349513 32349655 . + 1 Parent=GSCOCT00038139001 | |
| 74366 chr11 manual_curation CDS 32349750 32350241 . + 0 Parent=GSCOCT00038139001 | |
| 74367 chr11 manual_curation CDS 32350399 32351019 . + 0 Parent=GSCOCT00038139001 | |
| 74368 chr11 manual_curation gene 32359373 32360746 . - . ID=GSCOCG00038141001;Name=Cc11_g16090 | |
| 74369 chr11 manual_curation mRNA 32359373 32360746 . - . ID=GSCOCT00038141001;Parent=GSCOCG00038141001;Name=Cc11_g16090 | |
| 74370 chr11 manual_curation polypeptide 32359373 32360746 . - . ID=GSCOCP00038141001;Dbxref=GENE3D:G3DSA:2.130.10.10,InterPro:IPR001680,InterPro:IPR011046,InterPro:IPR015943,InterPro:IPR017986,InterPro:IPR019781,InterPro:IPR019782,InterPro:IPR020472,PFAM:PF00400,PRINTS:PR00320,PROFILE:PS50082,PROFILE:PS50294,SMART:SM00320,SUPERFAMILY:SSF50978,SwissProt:P90648,SwissProt:Q8YV57,SwissProt:Q9VZF4,TAIR:AT1G24130.1,TAIR:AT1G24530.1,TAIR:AT5G50120.1,TrEMBL:B9HTP7,TrEMBL:B9RMT1,TrEMBL:F6GVP5;Derives_from=GSCOCT00038141001;Name=Cc11_g16090;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.7.11.7,PRODUCT:Putative Myosin heavy chain kinase B,CC_functional_completeness:complete,CC_gene:ago,CC_gene:mhkB,CC_gene:all2124;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038141001~ Putative Myosin heavy chain kinase B~ ago~ complete;original_location=complement(634067..635440);owner=coffea | |
| 74371 chr11 manual_curation exon 32359373 32360746 . - . Parent=GSCOCT00038141001 | |
| 74372 chr11 manual_curation CDS 32359373 32360746 . - 0 Parent=GSCOCT00038141001 | |
| 74373 chr11 manual_curation gene 32366143 32370990 . - . ID=GSCOCG00038143001;Name=Cc11_g16100 | |
| 74374 chr11 manual_curation mRNA 32366143 32370990 . - . ID=GSCOCT00038143001;Parent=GSCOCG00038143001;Name=Cc11_g16100 | |
| 74375 chr11 manual_curation polypeptide 32366143 32370990 . - . ID=GSCOCP00038143001;Dbxref=InterPro:IPR001140,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR011527,InterPro:IPR017871,InterPro:IPR017940,PFAM:PF00005,PFAM:PF00664,PROFILE:PS50893,PROFILE:PS50929,PROSITE:PS00211,SMART:SM00382,SUPERFAMILY:SSF90123,SwissProt:Q6YUU5,SwissProt:Q9LHD1,SwissProt:Q9LSJ5,TAIR:AT3G28345.1,TAIR:AT3G28380.1,TAIR:AT3G28390.1,TrEMBL:A5BIJ5,TrEMBL:B9RMT0,TrEMBL:F6GVP6;Derives_from=GSCOCT00038143001;Name=Cc11_g16100;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0006810,GO:0016021,GO:0016887,GO:0017111,GO:0055085,CC_EC_number:3.6.3.44,CC_EC_number:3.6.3.44,PRODUCT:Putative multidrug resistance protein,CC_functional_completeness:complete,CC_gene:Os02g0190300,CC_gene:ABCB15,CC_gene:ABCB18;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038143001~ Putative multidrug resistance protein~ Os02g0190300~ complete;original_location=complement(join(645490..645684%2C645272..645326%2C644799..644983%2C644201..644658%2C643354..643894%2C641316..643273%2C640837..641215));owner=coffea | |
| 74376 chr11 manual_curation exon 32366143 32366521 . - . Parent=GSCOCT00038143001 | |
| 74377 chr11 manual_curation exon 32366622 32368579 . - . Parent=GSCOCT00038143001 | |
| 74378 chr11 manual_curation exon 32368660 32369200 . - . Parent=GSCOCT00038143001 | |
| 74379 chr11 manual_curation exon 32369507 32369964 . - . Parent=GSCOCT00038143001 | |
| 74380 chr11 manual_curation exon 32370105 32370289 . - . Parent=GSCOCT00038143001 | |
| 74381 chr11 manual_curation exon 32370578 32370632 . - . Parent=GSCOCT00038143001 | |
| 74382 chr11 manual_curation exon 32370796 32370990 . - . Parent=GSCOCT00038143001 | |
| 74383 chr11 manual_curation CDS 32366143 32366521 . - 2 Parent=GSCOCT00038143001 | |
| 74384 chr11 manual_curation CDS 32366622 32368579 . - 0 Parent=GSCOCT00038143001 | |
| 74385 chr11 manual_curation CDS 32368660 32369200 . - 2 Parent=GSCOCT00038143001 | |
| 74386 chr11 manual_curation CDS 32369507 32369964 . - 0 Parent=GSCOCT00038143001 | |
| 74387 chr11 manual_curation CDS 32370105 32370289 . - 1 Parent=GSCOCT00038143001 | |
| 74388 chr11 manual_curation CDS 32370578 32370632 . - 0 Parent=GSCOCT00038143001 | |
| 74389 chr11 manual_curation CDS 32370796 32370990 . - 0 Parent=GSCOCT00038143001 | |
| 74390 chr11 manual_curation gene 32372382 32373724 . + . ID=GSCOCG00038144001;Name=Cc11_g16110 | |
| 74391 chr11 manual_curation mRNA 32372382 32373724 . + . ID=GSCOCT00038144001;Parent=GSCOCG00038144001;Name=Cc11_g16110 | |
| 74392 chr11 manual_curation polypeptide 32372506 32373360 . + . ID=GSCOCP00038144001;Dbxref=TAIR:AT1G67785.1,TrEMBL:B6T0P7,TrEMBL:D6BRE2,TrEMBL:F2D721;Derives_from=GSCOCT00038144001;Name=Cc11_g16110;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B Has 30 Blast hits to 30 proteins in 12 species,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038144001~ unknown protein%3B Has 30 Blast hits to 30 proteins in 12 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 30%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(647200..647304%2C647965..648054);owner=coffea | |
| 74393 chr11 manual_curation exon 32372382 32372610 . + . Parent=GSCOCT00038144001 | |
| 74394 chr11 manual_curation exon 32373271 32373724 . + . Parent=GSCOCT00038144001 | |
| 74395 chr11 manual_curation CDS 32372506 32372610 . + 0 Parent=GSCOCT00038144001 | |
| 74396 chr11 manual_curation CDS 32373271 32373360 . + 0 Parent=GSCOCT00038144001 | |
| 74397 chr11 manual_curation gene 32375743 32377610 . + . ID=GSCOCG00038145001;Name=Cc11_g16120 | |
| 74398 chr11 manual_curation mRNA 32375743 32377610 . + . ID=GSCOCT00038145001;Parent=GSCOCG00038145001;Name=Cc11_g16120 | |
| 74399 chr11 manual_curation polypeptide 32375844 32377383 . + . ID=GSCOCP00038145001;Dbxref=InterPro:IPR000169,InterPro:IPR000668,InterPro:IPR013128,InterPro:IPR013201,PANTHER:PTHR12411,PFAM:PF00112,PFAM:PF08246,PRINTS:PR00705,PROSITE:PS00139,PROSITE:PS00639,PROSITE:PS00640,SMART:SM00645,SMART:SM00848,SwissProt:O65039,SwissProt:P12412,SwissProt:P25803,TAIR:AT3G48340.1,TAIR:AT3G48350.1,TAIR:AT5G50260.1,TrEMBL:B9HLD6,TrEMBL:D7SME9,TrEMBL:G4Y630;Derives_from=GSCOCT00038145001;Name=Cc11_g16120;Ontology_term=CC_evidence_code:ISS,GO:0004197,GO:0006508,GO:0008234,CC_EC_number:3.4.22.14,PRODUCT:Vignain,CC_functional_completeness:complete,CC_gene:CYSEP;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038145001~ Vignain~ CYSEP~ complete;original_location=join(650538..650979%2C651106..651338%2C651458..651598%2C651814..652077);owner=coffea | |
| 74400 chr11 manual_curation exon 32375743 32376285 . + . Parent=GSCOCT00038145001 | |
| 74401 chr11 manual_curation exon 32376412 32376644 . + . Parent=GSCOCT00038145001 | |
| 74402 chr11 manual_curation exon 32376764 32376904 . + . Parent=GSCOCT00038145001 | |
| 74403 chr11 manual_curation exon 32377120 32377610 . + . Parent=GSCOCT00038145001 | |
| 74404 chr11 manual_curation CDS 32375844 32376285 . + 0 Parent=GSCOCT00038145001 | |
| 74405 chr11 manual_curation CDS 32376412 32376644 . + 1 Parent=GSCOCT00038145001 | |
| 74406 chr11 manual_curation CDS 32376764 32376904 . + 0 Parent=GSCOCT00038145001 | |
| 74407 chr11 manual_curation CDS 32377120 32377383 . + 0 Parent=GSCOCT00038145001 | |
| 74408 chr11 manual_curation gene 32385577 32388219 . - . ID=GSCOCG00038146001;Name=Cc11_g16130 | |
| 74409 chr11 manual_curation mRNA 32385577 32388219 . - . ID=GSCOCT00038146001;Parent=GSCOCG00038146001;Name=Cc11_g16130 | |
| 74410 chr11 manual_curation polypeptide 32385577 32388219 . - . ID=GSCOCP00038146001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR007201,InterPro:IPR012677,PFAM:PF00076,PFAM:PF04059,PROFILE:PS50102,SMART:SM00360,SwissProt:A2WY46,SwissProt:O65001,SwissProt:Q8W4I9,TAIR:AT1G67770.1,TAIR:AT3G26120.1,TAIR:AT5G61960.1,TrEMBL:A9XIW7,TrEMBL:B9HLD5,TrEMBL:F6GVP8;Derives_from=GSCOCT00038146001;Name=Cc11_g16130;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,CC_EC_number:missing_EC_number,PRODUCT:Putative terminal EAR1-like 1,CC_functional_completeness:fragment,CC_gene:TE1,CC_gene:ML1,CC_gene:PLA2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038146001~ Putative terminal EAR1-like 1~ TE1~ fragment;original_location=complement(join(662550..662913%2C661462..662224%2C661161..661280%2C660904..661045%2C660271..660717));owner=coffea | |
| 74411 chr11 manual_curation exon 32385577 32386023 . - . Parent=GSCOCT00038146001 | |
| 74412 chr11 manual_curation exon 32386210 32386351 . - . Parent=GSCOCT00038146001 | |
| 74413 chr11 manual_curation exon 32386467 32386586 . - . Parent=GSCOCT00038146001 | |
| 74414 chr11 manual_curation exon 32386768 32387530 . - . Parent=GSCOCT00038146001 | |
| 74415 chr11 manual_curation exon 32387856 32388219 . - . Parent=GSCOCT00038146001 | |
| 74416 chr11 manual_curation CDS 32385577 32386023 . - 0 Parent=GSCOCT00038146001 | |
| 74417 chr11 manual_curation CDS 32386210 32386351 . - 2 Parent=GSCOCT00038146001 | |
| 74418 chr11 manual_curation CDS 32386467 32386586 . - 2 Parent=GSCOCT00038146001 | |
| 74419 chr11 manual_curation CDS 32386768 32387530 . - 1 Parent=GSCOCT00038146001 | |
| 74420 chr11 manual_curation CDS 32387856 32388219 . - 0 Parent=GSCOCT00038146001 | |
| 74421 chr11 manual_curation gene 32395775 32398774 . - . ID=GSCOCG00038147001;Name=Cc11_g16140 | |
| 74422 chr11 manual_curation mRNA 32395775 32398774 . - . ID=GSCOCT00038147001;Parent=GSCOCG00038147001;Name=Cc11_g16140 | |
| 74423 chr11 manual_curation polypeptide 32396015 32398720 . - . ID=GSCOCP00038147001;Dbxref=InterPro:IPR001926,PFAM:PF00291,SUPERFAMILY:SSF53686,TAIR:AT1G48420.1,TAIR:AT3G26115.2,TrEMBL:A1L4V7,TrEMBL:D7SMF1,TrEMBL:Q9LJG2;Derives_from=GSCOCT00038147001;Name=Cc11_g16140;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,GO:0030170,CC_EC_number:missing_EC_number,PRODUCT:Pyridoxal-5'-phosphate-dependent enzyme family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038147001~ Pyridoxal-5'-phosphate-dependent enzyme family protein~ unknown_gene~ complete;original_location=complement(join(673328..673414%2C672713..673036%2C672274..672316%2C671784..672128%2C671476..671605%2C671117..671293%2C670709..670943));owner=coffea | |
| 74424 chr11 manual_curation exon 32395775 32396249 . - . Parent=GSCOCT00038147001 | |
| 74425 chr11 manual_curation exon 32396423 32396599 . - . Parent=GSCOCT00038147001 | |
| 74426 chr11 manual_curation exon 32396782 32396911 . - . Parent=GSCOCT00038147001 | |
| 74427 chr11 manual_curation exon 32397090 32397434 . - . Parent=GSCOCT00038147001 | |
| 74428 chr11 manual_curation exon 32397580 32397622 . - . Parent=GSCOCT00038147001 | |
| 74429 chr11 manual_curation exon 32398019 32398342 . - . Parent=GSCOCT00038147001 | |
| 74430 chr11 manual_curation exon 32398634 32398774 . - . Parent=GSCOCT00038147001 | |
| 74431 chr11 manual_curation CDS 32396015 32396249 . - 2 Parent=GSCOCT00038147001 | |
| 74432 chr11 manual_curation CDS 32396423 32396599 . - 2 Parent=GSCOCT00038147001 | |
| 74433 chr11 manual_curation CDS 32396782 32396911 . - 1 Parent=GSCOCT00038147001 | |
| 74434 chr11 manual_curation CDS 32397090 32397434 . - 1 Parent=GSCOCT00038147001 | |
| 74435 chr11 manual_curation CDS 32397580 32397622 . - 0 Parent=GSCOCT00038147001 | |
| 74436 chr11 manual_curation CDS 32398019 32398342 . - 0 Parent=GSCOCT00038147001 | |
| 74437 chr11 manual_curation CDS 32398634 32398720 . - 0 Parent=GSCOCT00038147001 | |
| 74438 chr11 manual_curation gene 32398916 32405116 . + . ID=GSCOCG00038148001;Name=Cc11_g16150 | |
| 74439 chr11 manual_curation mRNA 32398916 32405116 . + . ID=GSCOCT00038148001;Parent=GSCOCG00038148001;Name=Cc11_g16150 | |
| 74440 chr11 manual_curation polypeptide 32399112 32404804 . + . ID=GSCOCP00038148001;Dbxref=InterPro:IPR007949,InterPro:IPR012977,InterPro:IPR016024,PFAM:PF05285,PFAM:PF08158,SUPERFAMILY:SSF48371,SwissProt:A7S6A5,SwissProt:Q7KKH3,SwissProt:Q9NVU7,TAIR:AT1G13160.1,TAIR:AT4G31520.1,TrEMBL:B9HLD4,TrEMBL:B9RMS4,TrEMBL:G7J2L9;Derives_from=GSCOCT00038148001;Name=Cc11_g16150;Ontology_term=CC_evidence_code:ISS,GO:0005488,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein SDA1 homolog,CC_functional_completeness:complete,CC_gene:SDAD1,CC_gene:sdad1,CC_gene:Mys45A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038148001~ Putative Protein SDA1 homolog~ SDAD1~ complete;original_location=join(673806..674120%2C675146..675322%2C675411..675535%2C675615..675753%2C676184..676333%2C676416..676469%2C676572..676667%2C676755..676814%2C676909..676983%2C677088..677141%2C677325..677426%2C677546..678196%2C678374..678472%2C678825..678932%2C679349..679498);owner=coffea | |
| 74441 chr11 manual_curation exon 32398916 32399426 . + . Parent=GSCOCT00038148001 | |
| 74442 chr11 manual_curation exon 32400452 32400628 . + . Parent=GSCOCT00038148001 | |
| 74443 chr11 manual_curation exon 32400717 32400841 . + . Parent=GSCOCT00038148001 | |
| 74444 chr11 manual_curation exon 32400921 32401059 . + . Parent=GSCOCT00038148001 | |
| 74445 chr11 manual_curation exon 32401490 32401639 . + . Parent=GSCOCT00038148001 | |
| 74446 chr11 manual_curation exon 32401722 32401775 . + . Parent=GSCOCT00038148001 | |
| 74447 chr11 manual_curation exon 32401878 32401973 . + . Parent=GSCOCT00038148001 | |
| 74448 chr11 manual_curation exon 32402061 32402120 . + . Parent=GSCOCT00038148001 | |
| 74449 chr11 manual_curation exon 32402215 32402289 . + . Parent=GSCOCT00038148001 | |
| 74450 chr11 manual_curation exon 32402394 32402447 . + . Parent=GSCOCT00038148001 | |
| 74451 chr11 manual_curation exon 32402631 32402732 . + . Parent=GSCOCT00038148001 | |
| 74452 chr11 manual_curation exon 32402852 32403502 . + . Parent=GSCOCT00038148001 | |
| 74453 chr11 manual_curation exon 32403680 32403778 . + . Parent=GSCOCT00038148001 | |
| 74454 chr11 manual_curation exon 32404131 32404238 . + . Parent=GSCOCT00038148001 | |
| 74455 chr11 manual_curation exon 32404655 32405116 . + . Parent=GSCOCT00038148001 | |
| 74456 chr11 manual_curation CDS 32399112 32399426 . + 0 Parent=GSCOCT00038148001 | |
| 74457 chr11 manual_curation CDS 32400452 32400628 . + 0 Parent=GSCOCT00038148001 | |
| 74458 chr11 manual_curation CDS 32400717 32400841 . + 0 Parent=GSCOCT00038148001 | |
| 74459 chr11 manual_curation CDS 32400921 32401059 . + 2 Parent=GSCOCT00038148001 | |
| 74460 chr11 manual_curation CDS 32401490 32401639 . + 0 Parent=GSCOCT00038148001 | |
| 74461 chr11 manual_curation CDS 32401722 32401775 . + 0 Parent=GSCOCT00038148001 | |
| 74462 chr11 manual_curation CDS 32401878 32401973 . + 0 Parent=GSCOCT00038148001 | |
| 74463 chr11 manual_curation CDS 32402061 32402120 . + 0 Parent=GSCOCT00038148001 | |
| 74464 chr11 manual_curation CDS 32402215 32402289 . + 0 Parent=GSCOCT00038148001 | |
| 74465 chr11 manual_curation CDS 32402394 32402447 . + 0 Parent=GSCOCT00038148001 | |
| 74466 chr11 manual_curation CDS 32402631 32402732 . + 0 Parent=GSCOCT00038148001 | |
| 74467 chr11 manual_curation CDS 32402852 32403502 . + 0 Parent=GSCOCT00038148001 | |
| 74468 chr11 manual_curation CDS 32403680 32403778 . + 0 Parent=GSCOCT00038148001 | |
| 74469 chr11 manual_curation CDS 32404131 32404238 . + 0 Parent=GSCOCT00038148001 | |
| 74470 chr11 manual_curation CDS 32404655 32404804 . + 0 Parent=GSCOCT00038148001 | |
| 74471 chr11 manual_curation gene 32405318 32411913 . - . ID=GSCOCG00038149001;Name=Cc11_g16160 | |
| 74472 chr11 manual_curation mRNA 32405318 32411913 . - . ID=GSCOCT00038149001;Parent=GSCOCG00038149001;Name=Cc11_g16160 | |
| 74473 chr11 manual_curation polypeptide 32405681 32411498 . - . ID=GSCOCP00038149001;Dbxref=GENE3D:G3DSA:2.30.29.30,InterPro:IPR000648,InterPro:IPR001849,InterPro:IPR011993,PANTHER:PTHR10972,PFAM:PF00169,PFAM:PF01237,PROFILE:PS50003,SMART:SM00233,SwissProt:O80866,SwissProt:Q8L751,SwissProt:Q9SAF0,TAIR:AT1G13170.2,TAIR:AT2G31020.1,TAIR:AT4G08180.1,TrEMBL:B9HTF9,TrEMBL:B9RMS3,TrEMBL:F6GVJ4;Derives_from=GSCOCT00038149001;Name=Cc11_g16160;Ontology_term=CC_evidence_code:ISS,GO:0008202,CC_EC_number:missing_EC_number,PRODUCT:Oxysterol-binding protein-related protein 1D,CC_functional_completeness:complete,CC_gene:ORP1D,CC_gene:ORP1C,CC_gene:ORP1A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038149001~ Oxysterol-binding protein-related protein 1D~ ORP1D~ complete;original_location=complement(join(686032..686192%2C685629..685974%2C684620..684976%2C684133..684217%2C683435..683910%2C682963..683118%2C682469..682777%2C681243..681587%2C680375..680545));owner=coffea | |
| 74474 chr11 manual_curation exon 32405318 32405851 . - . Parent=GSCOCT00038149001 | |
| 74475 chr11 manual_curation exon 32406549 32406893 . - . Parent=GSCOCT00038149001 | |
| 74476 chr11 manual_curation exon 32407775 32408083 . - . Parent=GSCOCT00038149001 | |
| 74477 chr11 manual_curation exon 32408269 32408424 . - . Parent=GSCOCT00038149001 | |
| 74478 chr11 manual_curation exon 32408741 32409216 . - . Parent=GSCOCT00038149001 | |
| 74479 chr11 manual_curation exon 32409439 32409523 . - . Parent=GSCOCT00038149001 | |
| 74480 chr11 manual_curation exon 32409926 32410282 . - . Parent=GSCOCT00038149001 | |
| 74481 chr11 manual_curation exon 32410935 32411280 . - . Parent=GSCOCT00038149001 | |
| 74482 chr11 manual_curation exon 32411338 32411913 . - . Parent=GSCOCT00038149001 | |
| 74483 chr11 manual_curation CDS 32405681 32405851 . - 0 Parent=GSCOCT00038149001 | |
| 74484 chr11 manual_curation CDS 32406549 32406893 . - 0 Parent=GSCOCT00038149001 | |
| 74485 chr11 manual_curation CDS 32407775 32408083 . - 0 Parent=GSCOCT00038149001 | |
| 74486 chr11 manual_curation CDS 32408269 32408424 . - 0 Parent=GSCOCT00038149001 | |
| 74487 chr11 manual_curation CDS 32408741 32409216 . - 1 Parent=GSCOCT00038149001 | |
| 74488 chr11 manual_curation CDS 32409439 32409523 . - 0 Parent=GSCOCT00038149001 | |
| 74489 chr11 manual_curation CDS 32409926 32410282 . - 0 Parent=GSCOCT00038149001 | |
| 74490 chr11 manual_curation CDS 32410935 32411280 . - 2 Parent=GSCOCT00038149001 | |
| 74491 chr11 manual_curation CDS 32411338 32411498 . - 0 Parent=GSCOCT00038149001 | |
| 74492 chr11 manual_curation gene 32415859 32421916 . + . ID=GSCOCG00038150001;Name=Cc11_g16170 | |
| 74493 chr11 manual_curation mRNA 32415859 32421916 . + . ID=GSCOCT00038150001;Parent=GSCOCG00038150001;Name=Cc11_g16170 | |
| 74494 chr11 manual_curation polypeptide 32416304 32421237 . + . ID=GSCOCP00038150001;Dbxref=InterPro:IPR004000,InterPro:IPR015623,PANTHER:PTHR11937,PANTHER:PTHR11937:SF31,PFAM:PF00022,SMART:SM00268,SwissProt:A2X6S3,SwissProt:Q6K908,SwissProt:Q9SAF1,TAIR:AT1G13180.1,TAIR:AT2G42100.1,TAIR:AT3G53750.1,TrEMBL:A5CLG6,TrEMBL:B9HLD3,TrEMBL:F6GVJ5;Derives_from=GSCOCT00038150001;Name=Cc11_g16170;Ontology_term=CC_evidence_code:ISS,GO:0003779,GO:0005515,GO:0005524,GO:0005856,GO:0030833,CC_EC_number:missing_EC_number,PRODUCT:Actin-related protein 3,CC_functional_completeness:complete,CC_gene:ARP3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038150001~ Actin-related protein 3~ ARP3~ complete;original_location=join(690998..691047%2C691183..691648%2C692833..692979%2C693235..693327%2C693449..693568%2C694094..694204%2C694816..694941%2C695040..695138%2C695851..695931);owner=coffea | |
| 74495 chr11 manual_curation exon 32415859 32416353 . + . Parent=GSCOCT00038150001 | |
| 74496 chr11 manual_curation exon 32416489 32416954 . + . Parent=GSCOCT00038150001 | |
| 74497 chr11 manual_curation exon 32418139 32418285 . + . Parent=GSCOCT00038150001 | |
| 74498 chr11 manual_curation exon 32418541 32418633 . + . Parent=GSCOCT00038150001 | |
| 74499 chr11 manual_curation exon 32418755 32418874 . + . Parent=GSCOCT00038150001 | |
| 74500 chr11 manual_curation exon 32419400 32419510 . + . Parent=GSCOCT00038150001 | |
| 74501 chr11 manual_curation exon 32420122 32420247 . + . Parent=GSCOCT00038150001 | |
| 74502 chr11 manual_curation exon 32420346 32420444 . + . Parent=GSCOCT00038150001 | |
| 74503 chr11 manual_curation exon 32421157 32421916 . + . Parent=GSCOCT00038150001 | |
| 74504 chr11 manual_curation CDS 32416304 32416353 . + 0 Parent=GSCOCT00038150001 | |
| 74505 chr11 manual_curation CDS 32416489 32416954 . + 2 Parent=GSCOCT00038150001 | |
| 74506 chr11 manual_curation CDS 32418139 32418285 . + 0 Parent=GSCOCT00038150001 | |
| 74507 chr11 manual_curation CDS 32418541 32418633 . + 0 Parent=GSCOCT00038150001 | |
| 74508 chr11 manual_curation CDS 32418755 32418874 . + 0 Parent=GSCOCT00038150001 | |
| 74509 chr11 manual_curation CDS 32419400 32419510 . + 0 Parent=GSCOCT00038150001 | |
| 74510 chr11 manual_curation CDS 32420122 32420247 . + 0 Parent=GSCOCT00038150001 | |
| 74511 chr11 manual_curation CDS 32420346 32420444 . + 0 Parent=GSCOCT00038150001 | |
| 74512 chr11 manual_curation CDS 32421157 32421237 . + 0 Parent=GSCOCT00038150001 | |
| 74513 chr11 manual_curation gene 32424386 32428560 . + . ID=GSCOCG00038152001;Name=Cc11_g16180 | |
| 74514 chr11 manual_curation mRNA 32424386 32428560 . + . ID=GSCOCT00038152001;Parent=GSCOCG00038152001;Name=Cc11_g16180 | |
| 74515 chr11 manual_curation polypeptide 32424810 32426777 . + . ID=GSCOCP00038152001;Dbxref=GENE3D:G3DSA:3.30.70.330,InterPro:IPR000504,InterPro:IPR012677,PFAM:PF00076,PROFILE:PS50102,SMART:SM00360,TAIR:AT1G13190.1,TAIR:AT5G55670.1,TrEMBL:B9HLD1,TrEMBL:B9RMS1,TrEMBL:F6GVJ6;Derives_from=GSCOCT00038152001;Name=Cc11_g16180;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0003676,CC_EC_number:missing_EC_number,PRODUCT:Putative RNA-binding (RRM/RBD/RNP motifs) family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038152001~ Putative RNA-binding (RRM/RBD/RNP motifs) family protein~ unknown_gene~ complete;original_location=699504..701471;owner=coffea | |
| 74516 chr11 manual_curation exon 32424386 32424588 . + . Parent=GSCOCT00038152001 | |
| 74517 chr11 manual_curation exon 32428265 32428560 . + . Parent=GSCOCT00038152001 | |
| 74518 chr11 manual_curation exon 32424772 32426929 . + . Parent=GSCOCT00038152001 | |
| 74519 chr11 manual_curation CDS 32424810 32426777 . + 0 Parent=GSCOCT00038152001 | |
| 74520 chr11 manual_curation gene 32433913 32439339 . + . ID=GSCOCG00038154001;Name=Cc11_g16190 | |
| 74521 chr11 manual_curation mRNA 32433913 32439339 . + . ID=GSCOCT00038154001;Parent=GSCOCG00038154001;Name=Cc11_g16190 | |
| 74522 chr11 manual_curation polypeptide 32434077 32438815 . + . ID=GSCOCP00038154001;Dbxref=InterPro:IPR002194,InterPro:IPR002423,InterPro:IPR012718,InterPro:IPR017998,PANTHER:PTHR11353,PANTHER:PTHR11353:SF25,PFAM:PF00118,PRINTS:PR00304,PROSITE:PS00750,PROSITE:PS00751,PROSITE:PS00995,SUPERFAMILY:SSF48592,SwissProt:O04450,SwissProt:P40412,SwissProt:P54411,TAIR:AT1G24510.1,TAIR:AT3G18190.1,TAIR:AT5G26360.1,TIGRFAMs:TIGR02343,TrEMBL:B9RMR9,TrEMBL:I1LNE6,TrEMBL:I1MYL7;Derives_from=GSCOCT00038154001;Name=Cc11_g16190;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0005524,GO:0006457,GO:0044267,GO:0051082,CC_EC_number:missing_EC_number,PRODUCT:T-complex protein 1 subunit epsilon,CC_functional_completeness:complete,CC_gene:At1g24510;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038154001~ T-complex protein 1 subunit epsilon~ At1g24510~ complete;original_location=join(708771..708969%2C709899..710217%2C710789..711137%2C711544..711676%2C711778..711830%2C712594..712696%2C712885..713051%2C713124..713237%2C713339..713509);owner=coffea | |
| 74523 chr11 manual_curation exon 32433913 32434275 . + . Parent=GSCOCT00038154001 | |
| 74524 chr11 manual_curation exon 32435205 32435523 . + . Parent=GSCOCT00038154001 | |
| 74525 chr11 manual_curation exon 32436095 32436443 . + . Parent=GSCOCT00038154001 | |
| 74526 chr11 manual_curation exon 32436850 32436982 . + . Parent=GSCOCT00038154001 | |
| 74527 chr11 manual_curation exon 32437084 32437136 . + . Parent=GSCOCT00038154001 | |
| 74528 chr11 manual_curation exon 32437900 32438002 . + . Parent=GSCOCT00038154001 | |
| 74529 chr11 manual_curation exon 32438191 32438357 . + . Parent=GSCOCT00038154001 | |
| 74530 chr11 manual_curation exon 32438430 32438543 . + . Parent=GSCOCT00038154001 | |
| 74531 chr11 manual_curation exon 32438645 32439339 . + . Parent=GSCOCT00038154001 | |
| 74532 chr11 manual_curation CDS 32434077 32434275 . + 0 Parent=GSCOCT00038154001 | |
| 74533 chr11 manual_curation CDS 32435205 32435523 . + 1 Parent=GSCOCT00038154001 | |
| 74534 chr11 manual_curation CDS 32436095 32436443 . + 2 Parent=GSCOCT00038154001 | |
| 74535 chr11 manual_curation CDS 32436850 32436982 . + 0 Parent=GSCOCT00038154001 | |
| 74536 chr11 manual_curation CDS 32437084 32437136 . + 1 Parent=GSCOCT00038154001 | |
| 74537 chr11 manual_curation CDS 32437900 32438002 . + 0 Parent=GSCOCT00038154001 | |
| 74538 chr11 manual_curation CDS 32438191 32438357 . + 1 Parent=GSCOCT00038154001 | |
| 74539 chr11 manual_curation CDS 32438430 32438543 . + 0 Parent=GSCOCT00038154001 | |
| 74540 chr11 manual_curation CDS 32438645 32438815 . + 0 Parent=GSCOCT00038154001 | |
| 74541 chr11 manual_curation gene 32441604 32443959 . - . ID=GSCOCG00038155001;Name=Cc11_g16200 | |
| 74542 chr11 manual_curation mRNA 32441604 32443959 . - . ID=GSCOCT00038155001;Parent=GSCOCG00038155001;Name=Cc11_g16200 | |
| 74543 chr11 manual_curation polypeptide 32441986 32443753 . - . ID=GSCOCP00038155001;Dbxref=GENE3D:G3DSA:2.160.20.10,InterPro:IPR002022,InterPro:IPR011050,InterPro:IPR012334,InterPro:IPR018082,PFAM:PF00544,PRINTS:PR00807,SMART:SM00656,SUPERFAMILY:SSF51126,SwissProt:Q93Z25,SwissProt:Q9C5M8,SwissProt:Q9FXD8,TAIR:AT1G67750.1,TAIR:AT4G24780.1,TAIR:AT5G63180.1,TrEMBL:D7KVN7,TrEMBL:D7SMF7,TrEMBL:Q93XJ1;Derives_from=GSCOCT00038155001;Name=Cc11_g16200;Ontology_term=CC_evidence_code:ISS,CC_EC_number:4.2.2.2,PRODUCT:Probable pectate lyase 5,CC_functional_completeness:complete,CC_gene:At1g67750,CC_gene:At5g63180,CC_gene:At4g24780;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038155001~ Probable pectate lyase 5~ At1g67750~ complete;original_location=complement(join(718344..718447%2C717409..718146%2C717164..717302%2C716680..716901));owner=coffea | |
| 74544 chr11 manual_curation exon 32441604 32442207 . - . Parent=GSCOCT00038155001 | |
| 74545 chr11 manual_curation exon 32442470 32442608 . - . Parent=GSCOCT00038155001 | |
| 74546 chr11 manual_curation exon 32442715 32443452 . - . Parent=GSCOCT00038155001 | |
| 74547 chr11 manual_curation exon 32443650 32443959 . - . Parent=GSCOCT00038155001 | |
| 74548 chr11 manual_curation CDS 32441986 32442207 . - 0 Parent=GSCOCT00038155001 | |
| 74549 chr11 manual_curation CDS 32442470 32442608 . - 2 Parent=GSCOCT00038155001 | |
| 74550 chr11 manual_curation CDS 32442715 32443452 . - 2 Parent=GSCOCT00038155001 | |
| 74551 chr11 manual_curation CDS 32443650 32443753 . - 0 Parent=GSCOCT00038155001 | |
| 74552 chr11 manual_curation gene 32448251 32452953 . - . ID=GSCOCG00038156001;Name=Cc11_g16210 | |
| 74553 chr11 manual_curation mRNA 32448251 32452953 . - . ID=GSCOCT00038156001;Parent=GSCOCG00038156001;Name=Cc11_g16210 | |
| 74554 chr11 manual_curation polypeptide 32448636 32451716 . - . ID=GSCOCP00038156001;Dbxref=GENE3D:G3DSA:2.130.10.30,InterPro:IPR000408,InterPro:IPR009091,PFAM:PF00415,PRINTS:PR00633,PROFILE:PS50012,PROSITE:PS00626,SUPERFAMILY:SSF50985,SwissProt:O95714,SwissProt:Q4U2R1,SwissProt:Q9VR91,TAIR:AT3G15430.1,TAIR:AT3G26100.2,TAIR:AT5G63860.1,TrEMBL:A5BV58,TrEMBL:D7SMF8,TrEMBL:I1MYL4;Derives_from=GSCOCT00038156001;Name=Cc11_g16210;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative E3 ubiquitin-protein ligase HERC2,CC_functional_completeness:fragment,CC_gene:HERC2,CC_gene:Herc2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038156001~ Putative E3 ubiquitin-protein ligase HERC2~ HERC2~ fragment;original_location=complement(join(726150..726410%2C725708..726057%2C725202..725603%2C724178..724565%2C723330..723572));owner=coffea | |
| 74555 chr11 manual_curation exon 32448251 32448878 . - . Parent=GSCOCT00038156001 | |
| 74556 chr11 manual_curation exon 32449484 32449871 . - . Parent=GSCOCT00038156001 | |
| 74557 chr11 manual_curation exon 32450508 32450909 . - . Parent=GSCOCT00038156001 | |
| 74558 chr11 manual_curation exon 32451014 32451363 . - . Parent=GSCOCT00038156001 | |
| 74559 chr11 manual_curation exon 32451456 32452953 . - . Parent=GSCOCT00038156001 | |
| 74560 chr11 manual_curation CDS 32448636 32448878 . - 0 Parent=GSCOCT00038156001 | |
| 74561 chr11 manual_curation CDS 32449484 32449871 . - 2 Parent=GSCOCT00038156001 | |
| 74562 chr11 manual_curation CDS 32450508 32450909 . - 2 Parent=GSCOCT00038156001 | |
| 74563 chr11 manual_curation CDS 32451014 32451363 . - 0 Parent=GSCOCT00038156001 | |
| 74564 chr11 manual_curation CDS 32451456 32451716 . - 0 Parent=GSCOCT00038156001 | |
| 74565 chr11 manual_curation gene 32459822 32465942 . - . ID=GSCOCG00038158001;Name=Cc11_g16220 | |
| 74566 chr11 manual_curation mRNA 32459822 32465942 . - . ID=GSCOCT00038158001;Parent=GSCOCG00038158001;Name=Cc11_g16220 | |
| 74567 chr11 manual_curation polypeptide 32460385 32465517 . - . ID=GSCOCP00038158001;Dbxref=InterPro:IPR001708,InterPro:IPR020001,PANTHER:PTHR12428,PFAM:PF02096,SwissProt:Q8LBP4,SwissProt:Q9FY06,SwissProt:Q9FYL3,TAIR:AT1G24490.1,TAIR:AT2G28800.1,TIGRFAMs:TIGR03592,TrEMBL:B9RMR6,TrEMBL:D7SMF9,TrEMBL:I1MYL3;Derives_from=GSCOCT00038158001;Name=Cc11_g16220;Ontology_term=CC_evidence_code:ISS,GO:0016021,GO:0051205,CC_EC_number:missing_EC_number,PRODUCT:ALBINO3-like protein 1%2C chloroplastic,CC_functional_completeness:complete,CC_gene:ALB3L1,CC_gene:ALB3,CC_gene:PPF-1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038158001~ ALBINO3-like protein 1%2C chloroplastic~ ALB3L1~ complete;original_location=complement(join(739849..740211%2C739633..739743%2C739398..739472%2C738969..739029%2C738663..738736%2C738467..738571%2C737224..737331%2C736469..736572%2C736102..736305%2C735712..736015%2C735079..735156));owner=coffea | |
| 74568 chr11 manual_curation exon 32459822 32460462 . - . Parent=GSCOCT00038158001 | |
| 74569 chr11 manual_curation exon 32461018 32461321 . - . Parent=GSCOCT00038158001 | |
| 74570 chr11 manual_curation exon 32461408 32461611 . - . Parent=GSCOCT00038158001 | |
| 74571 chr11 manual_curation exon 32461775 32461878 . - . Parent=GSCOCT00038158001 | |
| 74572 chr11 manual_curation exon 32462530 32462637 . - . Parent=GSCOCT00038158001 | |
| 74573 chr11 manual_curation exon 32463773 32463877 . - . Parent=GSCOCT00038158001 | |
| 74574 chr11 manual_curation exon 32463969 32464042 . - . Parent=GSCOCT00038158001 | |
| 74575 chr11 manual_curation exon 32464275 32464335 . - . Parent=GSCOCT00038158001 | |
| 74576 chr11 manual_curation exon 32464704 32464778 . - . Parent=GSCOCT00038158001 | |
| 74577 chr11 manual_curation exon 32464939 32465049 . - . Parent=GSCOCT00038158001 | |
| 74578 chr11 manual_curation exon 32465155 32465942 . - . Parent=GSCOCT00038158001 | |
| 74579 chr11 manual_curation CDS 32460385 32460462 . - 0 Parent=GSCOCT00038158001 | |
| 74580 chr11 manual_curation CDS 32461018 32461321 . - 2 Parent=GSCOCT00038158001 | |
| 74581 chr11 manual_curation CDS 32461408 32461611 . - 2 Parent=GSCOCT00038158001 | |
| 74582 chr11 manual_curation CDS 32461775 32461878 . - 0 Parent=GSCOCT00038158001 | |
| 74583 chr11 manual_curation CDS 32462530 32462637 . - 0 Parent=GSCOCT00038158001 | |
| 74584 chr11 manual_curation CDS 32463773 32463877 . - 0 Parent=GSCOCT00038158001 | |
| 74585 chr11 manual_curation CDS 32463969 32464042 . - 1 Parent=GSCOCT00038158001 | |
| 74586 chr11 manual_curation CDS 32464275 32464335 . - 0 Parent=GSCOCT00038158001 | |
| 74587 chr11 manual_curation CDS 32464704 32464778 . - 0 Parent=GSCOCT00038158001 | |
| 74588 chr11 manual_curation CDS 32464939 32465049 . - 0 Parent=GSCOCT00038158001 | |
| 74589 chr11 manual_curation CDS 32465155 32465517 . - 0 Parent=GSCOCT00038158001 | |
| 74590 chr11 manual_curation gene 32468050 32469195 . + . ID=GSCOCG00038159001;Name=Cc11_g16230 | |
| 74591 chr11 manual_curation mRNA 32468050 32469195 . + . ID=GSCOCT00038159001;Parent=GSCOCG00038159001;Name=Cc11_g16230 | |
| 74592 chr11 manual_curation polypeptide 32468412 32469002 . + . ID=GSCOCP00038159001;Dbxref=HAMAP:MF_00717,InterPro:IPR009388,PFAM:PF06298,SwissProt:O49347,SwissProt:P80470,TAIR:AT1G67740.1,TrEMBL:A9PIV1,TrEMBL:A9PJJ8,TrEMBL:F6GVJ9;Derives_from=GSCOCT00038159001;Name=Cc11_g16230;Ontology_term=CC_evidence_code:ISS,GO:0009523,GO:0015979,GO:0016021,GO:0030145,CC_EC_number:missing_EC_number,PRODUCT:Photosystem II core complex proteins psbY%2C chloroplastic,CC_functional_completeness:complete,CC_gene:PSBY;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038159001~ Photosystem II core complex proteins psbY%2C chloroplastic~ PSBY~ complete;original_location=743106..743696;owner=coffea | |
| 74593 chr11 manual_curation exon 32468050 32469195 . + . Parent=GSCOCT00038159001 | |
| 74594 chr11 manual_curation CDS 32468412 32469002 . + 0 Parent=GSCOCT00038159001 | |
| 74595 chr11 manual_curation gene 32472023 32473375 . + . ID=GSCOCG00038160001;Name=Cc11_g16240 | |
| 74596 chr11 manual_curation mRNA 32472023 32473375 . + . ID=GSCOCT00038160001;Parent=GSCOCG00038160001;Name=Cc11_g16240 | |
| 74597 chr11 manual_curation polypeptide 32472600 32473340 . + . ID=GSCOCP00038160001;Dbxref=InterPro:IPR013216,PFAM:PF08241,TAIR:AT1G24480.1,TAIR:AT4G24805.1,TAIR:AT5G01710.1,TrEMBL:A7WPL5,TrEMBL:D7KAM7,TrEMBL:F6GVK0;Derives_from=GSCOCT00038160001;Name=Cc11_g16240;Ontology_term=CC_evidence_code:ISS,GO:0008152,GO:0008168,CC_EC_number:missing_EC_number,PRODUCT:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038160001~ S-adenosyl-L-methionine-dependent methyltransferases superfamily protein~ unknown_gene~ complete;original_location=747294..748034;owner=coffea | |
| 74598 chr11 manual_curation exon 32472023 32473375 . + . Parent=GSCOCT00038160001 | |
| 74599 chr11 manual_curation CDS 32472600 32473340 . + 0 Parent=GSCOCT00038160001 | |
| 74600 chr11 manual_curation gene 32474645 32480921 . - . ID=GSCOCG00038161001;Name=Cc11_g16250 | |
| 74601 chr11 manual_curation mRNA 32474645 32480921 . - . ID=GSCOCT00038161001;Parent=GSCOCG00038161001;Name=Cc11_g16250 | |
| 74602 chr11 manual_curation polypeptide 32474748 32480776 . - . ID=GSCOCP00038161001;Dbxref=TAIR:AT1G30060.1,TAIR:AT4G00930.1,TAIR:AT5G37190.1,TrEMBL:B9HTF1,TrEMBL:B9RMR3,TrEMBL:F6GVK1;Derives_from=GSCOCT00038161001;Name=Cc11_g16250;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038161001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(755329..755470%2C754578..754645%2C753599..754496%2C750919..753459%2C750256..750310%2C749442..749592));owner=coffea | |
| 74603 chr11 manual_curation exon 32474645 32474898 . - . Parent=GSCOCT00038161001 | |
| 74604 chr11 manual_curation exon 32475562 32475616 . - . Parent=GSCOCT00038161001 | |
| 74605 chr11 manual_curation exon 32476225 32478765 . - . Parent=GSCOCT00038161001 | |
| 74606 chr11 manual_curation exon 32478905 32479802 . - . Parent=GSCOCT00038161001 | |
| 74607 chr11 manual_curation exon 32479884 32479951 . - . Parent=GSCOCT00038161001 | |
| 74608 chr11 manual_curation exon 32480635 32480921 . - . Parent=GSCOCT00038161001 | |
| 74609 chr11 manual_curation CDS 32474748 32474898 . - 2 Parent=GSCOCT00038161001 | |
| 74610 chr11 manual_curation CDS 32475562 32475616 . - 1 Parent=GSCOCT00038161001 | |
| 74611 chr11 manual_curation CDS 32476225 32478765 . - 1 Parent=GSCOCT00038161001 | |
| 74612 chr11 manual_curation CDS 32478905 32479802 . - 0 Parent=GSCOCT00038161001 | |
| 74613 chr11 manual_curation CDS 32479884 32479951 . - 1 Parent=GSCOCT00038161001 | |
| 74614 chr11 manual_curation CDS 32480635 32480776 . - 0 Parent=GSCOCT00038161001 | |
| 74615 chr11 manual_curation gene 32482137 32492065 . - . ID=GSCOCG00038162001;Name=Cc11_g16260 | |
| 74616 chr11 manual_curation mRNA 32482137 32492065 . - . ID=GSCOCT00038162001;Parent=GSCOCG00038162001;Name=Cc11_g16260 | |
| 74617 chr11 manual_curation polypeptide 32482427 32492065 . - . ID=GSCOCP00038162001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR002198,InterPro:IPR002347,InterPro:IPR016040,InterPro:IPR020904,PANTHER:PTHR19410,PFAM:PF00106,PRINTS:PR00080,PRINTS:PR00081,PROSITE:PS00061,SwissProt:O70503,SwissProt:Q53GQ0,SwissProt:Q6P7R8,TAIR:AT1G24470.1,TAIR:AT1G67730.1,TAIR:AT3G03330.1,TrEMBL:B9HTF0,TrEMBL:F6GVK2,TrEMBL:Q0VH88;Derives_from=GSCOCT00038162001;Name=Cc11_g16260;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0005488,GO:0008152,GO:0016491,GO:0055114,CC_EC_number:1.1.1.62,PRODUCT:Putative Estradiol 17-beta-dehydrogenase 12,CC_functional_completeness:complete,CC_gene:Hsd17b12,CC_gene:HSD17B12;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038162001~ Putative Estradiol 17-beta-dehydrogenase 12~ Hsd17b12~ complete;original_location=complement(join(766116..766759%2C763307..763376%2C762943..763183%2C761485..761512%2C761313..761415%2C757613..758214%2C757448..757517%2C757121..757375));owner=coffea | |
| 74618 chr11 manual_curation exon 32482137 32482681 . - . Parent=GSCOCT00038162001 | |
| 74619 chr11 manual_curation exon 32482754 32482823 . - . Parent=GSCOCT00038162001 | |
| 74620 chr11 manual_curation exon 32482919 32483520 . - . Parent=GSCOCT00038162001 | |
| 74621 chr11 manual_curation exon 32486619 32486721 . - . Parent=GSCOCT00038162001 | |
| 74622 chr11 manual_curation exon 32486791 32486818 . - . Parent=GSCOCT00038162001 | |
| 74623 chr11 manual_curation exon 32488249 32488489 . - . Parent=GSCOCT00038162001 | |
| 74624 chr11 manual_curation exon 32488613 32488682 . - . Parent=GSCOCT00038162001 | |
| 74625 chr11 manual_curation exon 32491422 32492065 . - . Parent=GSCOCT00038162001 | |
| 74626 chr11 manual_curation CDS 32482427 32482681 . - 0 Parent=GSCOCT00038162001 | |
| 74627 chr11 manual_curation CDS 32482754 32482823 . - 2 Parent=GSCOCT00038162001 | |
| 74628 chr11 manual_curation CDS 32482919 32483520 . - 0 Parent=GSCOCT00038162001 | |
| 74629 chr11 manual_curation CDS 32486619 32486721 . - 2 Parent=GSCOCT00038162001 | |
| 74630 chr11 manual_curation CDS 32486791 32486818 . - 1 Parent=GSCOCT00038162001 | |
| 74631 chr11 manual_curation CDS 32488249 32488489 . - 0 Parent=GSCOCT00038162001 | |
| 74632 chr11 manual_curation CDS 32488613 32488682 . - 2 Parent=GSCOCT00038162001 | |
| 74633 chr11 manual_curation CDS 32491422 32492065 . - 0 Parent=GSCOCT00038162001 | |
| 74634 chr11 manual_curation gene 32492794 32499113 . - . ID=GSCOCG00038163001;Name=Cc11_g16270 | |
| 74635 chr11 manual_curation mRNA 32492794 32499113 . - . ID=GSCOCT00038163001;Parent=GSCOCG00038163001;Name=Cc11_g16270 | |
| 74636 chr11 manual_curation polypeptide 32493543 32498752 . - . ID=GSCOCP00038163001;Dbxref=InterPro:IPR000342,InterPro:IPR016137,PFAM:PF00615,PROFILE:PS50132,SMART:SM00315,SUPERFAMILY:SSF48097,TAIR:AT3G26090.1,TrEMBL:B9HLC2,TrEMBL:D7TAJ5,TrEMBL:I1LND8;Derives_from=GSCOCT00038163001;Name=Cc11_g16270;Ontology_term=CC_evidence_code:ISS,GO:0004871,CC_EC_number:missing_EC_number,PRODUCT:G-protein coupled receptors%3BGTPase activators,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038163001~ G-protein coupled receptors%3BGTPase activators~ unknown_gene~ complete;original_location=complement(join(773370..773446%2C772180..772300%2C771958..772018%2C771769..771853%2C771228..771301%2C770264..770455%2C769612..769700%2C769212..769450%2C769005..769129%2C768598..768719%2C768237..768446));owner=coffea | |
| 74637 chr11 manual_curation exon 32492794 32493752 . - . Parent=GSCOCT00038163001 | |
| 74638 chr11 manual_curation exon 32493904 32494025 . - . Parent=GSCOCT00038163001 | |
| 74639 chr11 manual_curation exon 32494311 32494435 . - . Parent=GSCOCT00038163001 | |
| 74640 chr11 manual_curation exon 32494518 32494756 . - . Parent=GSCOCT00038163001 | |
| 74641 chr11 manual_curation exon 32494918 32495006 . - . Parent=GSCOCT00038163001 | |
| 74642 chr11 manual_curation exon 32495570 32495761 . - . Parent=GSCOCT00038163001 | |
| 74643 chr11 manual_curation exon 32496534 32496607 . - . Parent=GSCOCT00038163001 | |
| 74644 chr11 manual_curation exon 32497075 32497159 . - . Parent=GSCOCT00038163001 | |
| 74645 chr11 manual_curation exon 32497264 32497324 . - . Parent=GSCOCT00038163001 | |
| 74646 chr11 manual_curation exon 32497486 32497606 . - . Parent=GSCOCT00038163001 | |
| 74647 chr11 manual_curation exon 32498676 32499113 . - . Parent=GSCOCT00038163001 | |
| 74648 chr11 manual_curation CDS 32493543 32493752 . - 0 Parent=GSCOCT00038163001 | |
| 74649 chr11 manual_curation CDS 32493904 32494025 . - 1 Parent=GSCOCT00038163001 | |
| 74650 chr11 manual_curation CDS 32494311 32494435 . - 2 Parent=GSCOCT00038163001 | |
| 74651 chr11 manual_curation CDS 32494518 32494756 . - 0 Parent=GSCOCT00038163001 | |
| 74652 chr11 manual_curation CDS 32494918 32495006 . - 1 Parent=GSCOCT00038163001 | |
| 74653 chr11 manual_curation CDS 32495570 32495761 . - 1 Parent=GSCOCT00038163001 | |
| 74654 chr11 manual_curation CDS 32496534 32496607 . - 2 Parent=GSCOCT00038163001 | |
| 74655 chr11 manual_curation CDS 32497075 32497159 . - 1 Parent=GSCOCT00038163001 | |
| 74656 chr11 manual_curation CDS 32497264 32497324 . - 0 Parent=GSCOCT00038163001 | |
| 74657 chr11 manual_curation CDS 32497486 32497606 . - 2 Parent=GSCOCT00038163001 | |
| 74658 chr11 manual_curation CDS 32498676 32498752 . - 0 Parent=GSCOCT00038163001 | |
| 74659 chr11 manual_curation gene 32499431 32503597 . - . ID=GSCOCG00038164001;Name=Cc11_g16280 | |
| 74660 chr11 manual_curation mRNA 32499431 32503597 . - . ID=GSCOCT00038164001;Parent=GSCOCG00038164001;Name=Cc11_g16280 | |
| 74661 chr11 manual_curation polypeptide 32500194 32503287 . - . ID=GSCOCP00038164001;Dbxref=InterPro:IPR003675,PFAM:PF02517,TAIR:AT3G26085.2,TrEMBL:B9RMQ5,TrEMBL:F6HG31,TrEMBL:I1KSU6;Derives_from=GSCOCT00038164001;Name=Cc11_g16280;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:CAAX amino terminal protease family protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038164001~ CAAX amino terminal protease family protein~ unknown_gene~ fragment;original_location=complement(join(777906..777981%2C777510..777568%2C777107..777406%2C776574..776634%2C775691..775815%2C775500..775562%2C775259..775383%2C774888..775023));owner=coffea | |
| 74662 chr11 manual_curation exon 32503420 32503597 . - . Parent=GSCOCT00038164001 | |
| 74663 chr11 manual_curation exon 32499431 32500329 . - . Parent=GSCOCT00038164001 | |
| 74664 chr11 manual_curation exon 32500565 32500689 . - . Parent=GSCOCT00038164001 | |
| 74665 chr11 manual_curation exon 32500806 32500868 . - . Parent=GSCOCT00038164001 | |
| 74666 chr11 manual_curation exon 32500997 32501121 . - . Parent=GSCOCT00038164001 | |
| 74667 chr11 manual_curation exon 32501880 32501940 . - . Parent=GSCOCT00038164001 | |
| 74668 chr11 manual_curation exon 32502413 32502712 . - . Parent=GSCOCT00038164001 | |
| 74669 chr11 manual_curation exon 32502816 32502874 . - . Parent=GSCOCT00038164001 | |
| 74670 chr11 manual_curation exon 32503212 32503346 . - . Parent=GSCOCT00038164001 | |
| 74671 chr11 manual_curation CDS 32500194 32500329 . - 2 Parent=GSCOCT00038164001 | |
| 74672 chr11 manual_curation CDS 32500565 32500689 . - 0 Parent=GSCOCT00038164001 | |
| 74673 chr11 manual_curation CDS 32500806 32500868 . - 0 Parent=GSCOCT00038164001 | |
| 74674 chr11 manual_curation CDS 32500997 32501121 . - 1 Parent=GSCOCT00038164001 | |
| 74675 chr11 manual_curation CDS 32501880 32501940 . - 0 Parent=GSCOCT00038164001 | |
| 74676 chr11 manual_curation CDS 32502413 32502712 . - 0 Parent=GSCOCT00038164001 | |
| 74677 chr11 manual_curation CDS 32502816 32502874 . - 1 Parent=GSCOCT00038164001 | |
| 74678 chr11 manual_curation CDS 32503212 32503287 . - 0 Parent=GSCOCT00038164001 | |
| 74679 chr11 manual_curation gene 32504826 32513051 . - . ID=GSCOCG00038165001;Name=Cc11_g16290 | |
| 74680 chr11 manual_curation mRNA 32504826 32513051 . - . ID=GSCOCT00038165001;Parent=GSCOCG00038165001;Name=Cc11_g16290 | |
| 74681 chr11 manual_curation polypeptide 32505137 32512749 . - . ID=GSCOCP00038165001;Dbxref=TAIR:AT1G24460.1,TAIR:AT4G31570.1,TrEMBL:F6HG32,TrEMBL:I1LND6,TrEMBL:I1MYK5;Derives_from=GSCOCT00038165001;Name=Cc11_g16290;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038165001~ Putative unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 14 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31570.1)%3B Has 181008 Blast hits to 85359 proteins in 3551 species: Archae - 3290%3B Bacteria - 48304%3B Metazoa - 70793%3B Fungi - 13943%3B Plants - 10118%3B Viruses - 785%3B Other Eukaryotes - 33775 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(787327..787443%2C786404..786676%2C783115..786282%2C781834..782686%2C781076..781719%2C780397..780544%2C780216..780297%2C779831..779933));owner=coffea | |
| 74682 chr11 manual_curation exon 32512898 32513051 . - . Parent=GSCOCT00038165001 | |
| 74683 chr11 manual_curation exon 32504826 32505239 . - . Parent=GSCOCT00038165001 | |
| 74684 chr11 manual_curation exon 32505522 32505603 . - . Parent=GSCOCT00038165001 | |
| 74685 chr11 manual_curation exon 32505703 32505850 . - . Parent=GSCOCT00038165001 | |
| 74686 chr11 manual_curation exon 32506382 32507025 . - . Parent=GSCOCT00038165001 | |
| 74687 chr11 manual_curation exon 32507140 32507992 . - . Parent=GSCOCT00038165001 | |
| 74688 chr11 manual_curation exon 32508421 32511588 . - . Parent=GSCOCT00038165001 | |
| 74689 chr11 manual_curation exon 32511710 32511982 . - . Parent=GSCOCT00038165001 | |
| 74690 chr11 manual_curation exon 32512633 32512810 . - . Parent=GSCOCT00038165001 | |
| 74691 chr11 manual_curation CDS 32505137 32505239 . - 2 Parent=GSCOCT00038165001 | |
| 74692 chr11 manual_curation CDS 32505522 32505603 . - 1 Parent=GSCOCT00038165001 | |
| 74693 chr11 manual_curation CDS 32505703 32505850 . - 0 Parent=GSCOCT00038165001 | |
| 74694 chr11 manual_curation CDS 32506382 32507025 . - 1 Parent=GSCOCT00038165001 | |
| 74695 chr11 manual_curation CDS 32507140 32507992 . - 0 Parent=GSCOCT00038165001 | |
| 74696 chr11 manual_curation CDS 32508421 32511588 . - 0 Parent=GSCOCT00038165001 | |
| 74697 chr11 manual_curation CDS 32511710 32511982 . - 0 Parent=GSCOCT00038165001 | |
| 74698 chr11 manual_curation CDS 32512633 32512749 . - 0 Parent=GSCOCT00038165001 | |
| 74699 chr11 manual_curation gene 32515870 32518774 . - . ID=GSCOCG00038166001;Name=Cc11_g16300 | |
| 74700 chr11 manual_curation mRNA 32515870 32518774 . - . ID=GSCOCT00038166001;Parent=GSCOCG00038166001;Name=Cc11_g16300 | |
| 74701 chr11 manual_curation polypeptide 32516040 32518284 . - . ID=GSCOCP00038166001;Dbxref=InterPro:IPR001841,InterPro:IPR017907,PROFILE:PS50089,PROSITE:PS00518,SMART:SM00184,TAIR:AT1G13195.1,TAIR:AT1G24440.1,TAIR:AT5G01520.1,TrEMBL:B9HTE6,TrEMBL:B9RMQ2,TrEMBL:D7TAJ9;Derives_from=GSCOCT00038166001;Name=Cc11_g16300;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:RING/U-box superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038166001~ RING/U-box superfamily protein~ unknown_gene~ complete;original_location=complement(join(792890..792978%2C791759..791921%2C791406..791472%2C791073..791307%2C790734..790944));owner=coffea | |
| 74702 chr11 manual_curation exon 32515870 32516250 . - . Parent=GSCOCT00038166001 | |
| 74703 chr11 manual_curation exon 32516379 32516613 . - . Parent=GSCOCT00038166001 | |
| 74704 chr11 manual_curation exon 32516712 32516778 . - . Parent=GSCOCT00038166001 | |
| 74705 chr11 manual_curation exon 32517065 32517227 . - . Parent=GSCOCT00038166001 | |
| 74706 chr11 manual_curation exon 32518196 32518774 . - . Parent=GSCOCT00038166001 | |
| 74707 chr11 manual_curation CDS 32516040 32516250 . - 2 Parent=GSCOCT00038166001 | |
| 74708 chr11 manual_curation CDS 32516379 32516613 . - 1 Parent=GSCOCT00038166001 | |
| 74709 chr11 manual_curation CDS 32516712 32516778 . - 0 Parent=GSCOCT00038166001 | |
| 74710 chr11 manual_curation CDS 32517065 32517227 . - 2 Parent=GSCOCT00038166001 | |
| 74711 chr11 manual_curation CDS 32518196 32518284 . - 0 Parent=GSCOCT00038166001 | |
| 74712 chr11 manual_curation gene 32521255 32527787 . - . ID=GSCOCG00038167001;Name=Cc11_g16310 | |
| 74713 chr11 manual_curation mRNA 32521255 32527787 . - . ID=GSCOCT00038167001;Parent=GSCOCG00038167001;Name=Cc11_g16310 | |
| 74714 chr11 manual_curation polypeptide 32521597 32527787 . - . ID=GSCOCP00038167001;Dbxref=InterPro:IPR000719,InterPro:IPR001245,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR020635,PFAM:PF00560,PFAM:PF07714,PROFILE:PS50011,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:C0LGI2,SwissProt:Q9LIG2,SwissProt:Q9ZQQ7,TAIR:AT1G51805.1,TAIR:AT1G67720.1,TAIR:AT2G37050.3,TrEMBL:B9HLB9,TrEMBL:B9HTE5,TrEMBL:D7TAK0;Derives_from=GSCOCT00038167001;Name=Cc11_g16310;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.10.2,PRODUCT:Probable LRR receptor-like serine/threonine-protein kinase At1g67720,CC_functional_completeness:complete,CC_gene:At1g67720,CC_gene:At3g21340,CC_gene:At2g14440;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038167001~ Probable LRR receptor-like serine/threonine-protein kinase At1g67720~ At1g67720~ complete;original_location=complement(join(802412..802481%2C801662..802199%2C801012..801520%2C800768..800900%2C800256..800327%2C800112..800180%2C799945..800016%2C799690..799758%2C799383..799555%2C799041..799294%2C798377..798503%2C798219..798284%2C797960..798146%2C797736..797868%2C796291..796608));owner=coffea | |
| 74715 chr11 manual_curation exon 32521255 32521914 . - . Parent=GSCOCT00038167001 | |
| 74716 chr11 manual_curation exon 32523042 32523174 . - . Parent=GSCOCT00038167001 | |
| 74717 chr11 manual_curation exon 32523266 32523452 . - . Parent=GSCOCT00038167001 | |
| 74718 chr11 manual_curation exon 32523525 32523590 . - . Parent=GSCOCT00038167001 | |
| 74719 chr11 manual_curation exon 32523683 32523809 . - . Parent=GSCOCT00038167001 | |
| 74720 chr11 manual_curation exon 32524347 32524600 . - . Parent=GSCOCT00038167001 | |
| 74721 chr11 manual_curation exon 32524689 32524861 . - . Parent=GSCOCT00038167001 | |
| 74722 chr11 manual_curation exon 32524996 32525064 . - . Parent=GSCOCT00038167001 | |
| 74723 chr11 manual_curation exon 32525251 32525322 . - . Parent=GSCOCT00038167001 | |
| 74724 chr11 manual_curation exon 32525418 32525486 . - . Parent=GSCOCT00038167001 | |
| 74725 chr11 manual_curation exon 32525562 32525633 . - . Parent=GSCOCT00038167001 | |
| 74726 chr11 manual_curation exon 32526074 32526206 . - . Parent=GSCOCT00038167001 | |
| 74727 chr11 manual_curation exon 32526318 32526826 . - . Parent=GSCOCT00038167001 | |
| 74728 chr11 manual_curation exon 32526968 32527505 . - . Parent=GSCOCT00038167001 | |
| 74729 chr11 manual_curation exon 32527718 32527787 . - . Parent=GSCOCT00038167001 | |
| 74730 chr11 manual_curation CDS 32521597 32521914 . - 0 Parent=GSCOCT00038167001 | |
| 74731 chr11 manual_curation CDS 32523042 32523174 . - 2 Parent=GSCOCT00038167001 | |
| 74732 chr11 manual_curation CDS 32523266 32523452 . - 1 Parent=GSCOCT00038167001 | |
| 74733 chr11 manual_curation CDS 32523525 32523590 . - 1 Parent=GSCOCT00038167001 | |
| 74734 chr11 manual_curation CDS 32523683 32523809 . - 0 Parent=GSCOCT00038167001 | |
| 74735 chr11 manual_curation CDS 32524347 32524600 . - 1 Parent=GSCOCT00038167001 | |
| 74736 chr11 manual_curation CDS 32524689 32524861 . - 2 Parent=GSCOCT00038167001 | |
| 74737 chr11 manual_curation CDS 32524996 32525064 . - 2 Parent=GSCOCT00038167001 | |
| 74738 chr11 manual_curation CDS 32525251 32525322 . - 2 Parent=GSCOCT00038167001 | |
| 74739 chr11 manual_curation CDS 32525418 32525486 . - 2 Parent=GSCOCT00038167001 | |
| 74740 chr11 manual_curation CDS 32525562 32525633 . - 2 Parent=GSCOCT00038167001 | |
| 74741 chr11 manual_curation CDS 32526074 32526206 . - 1 Parent=GSCOCT00038167001 | |
| 74742 chr11 manual_curation CDS 32526318 32526826 . - 2 Parent=GSCOCT00038167001 | |
| 74743 chr11 manual_curation CDS 32526968 32527505 . - 1 Parent=GSCOCT00038167001 | |
| 74744 chr11 manual_curation CDS 32527718 32527787 . - 0 Parent=GSCOCT00038167001 | |
| 74745 chr11 manual_curation gene 32531194 32533050 . + . ID=GSCOCG00038169001;Name=Cc11_g16320 | |
| 74746 chr11 manual_curation mRNA 32531194 32533050 . + . ID=GSCOCT00038169001;Parent=GSCOCG00038169001;Name=Cc11_g16320 | |
| 74747 chr11 manual_curation polypeptide 32531194 32533050 . + . ID=GSCOCP00038169001;Dbxref=InterPro:IPR001841,InterPro:IPR017907,InterPro:IPR018957,PFAM:PF00097,PROFILE:PS50089,PROSITE:PS00518,SMART:SM00184,TAIR:AT1G13195.1,TAIR:AT3G47160.2,TAIR:AT5G01520.1,TrEMBL:B9HTE4,TrEMBL:B9RMQ0,TrEMBL:D7TAK1;Derives_from=GSCOCT00038169001;Name=Cc11_g16320;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:Putative RING/U-box superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038169001~ Putative RING/U-box superfamily protein~ unknown_gene~ complete;original_location=join(805888..805970%2C806764..806891%2C807050..807121%2C807219..807450%2C807531..807744);owner=coffea | |
| 74748 chr11 manual_curation exon 32531194 32531276 . + . Parent=GSCOCT00038169001 | |
| 74749 chr11 manual_curation exon 32532070 32532197 . + . Parent=GSCOCT00038169001 | |
| 74750 chr11 manual_curation exon 32532356 32532427 . + . Parent=GSCOCT00038169001 | |
| 74751 chr11 manual_curation exon 32532525 32532756 . + . Parent=GSCOCT00038169001 | |
| 74752 chr11 manual_curation exon 32532837 32533050 . + . Parent=GSCOCT00038169001 | |
| 74753 chr11 manual_curation CDS 32531194 32531276 . + 0 Parent=GSCOCT00038169001 | |
| 74754 chr11 manual_curation CDS 32532070 32532197 . + 2 Parent=GSCOCT00038169001 | |
| 74755 chr11 manual_curation CDS 32532356 32532427 . + 1 Parent=GSCOCT00038169001 | |
| 74756 chr11 manual_curation CDS 32532525 32532756 . + 1 Parent=GSCOCT00038169001 | |
| 74757 chr11 manual_curation CDS 32532837 32533050 . + 2 Parent=GSCOCT00038169001 | |
| 74758 chr11 manual_curation gene 32540934 32545980 . + . ID=GSCOCG00038170001;Name=Cc11_g16330 | |
| 74759 chr11 manual_curation mRNA 32540934 32545980 . + . ID=GSCOCT00038170001;Parent=GSCOCG00038170001;Name=Cc11_g16330 | |
| 74760 chr11 manual_curation polypeptide 32541308 32545774 . + . ID=GSCOCP00038170001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001789,InterPro:IPR006447,InterPro:IPR009057,InterPro:IPR011006,InterPro:IPR012287,InterPro:IPR014778,PFAM:PF00072,PFAM:PF00249,PROFILE:PS50110,SMART:SM00448,SUPERFAMILY:SSF46689,SUPERFAMILY:SSF52172,SwissProt:Q940D0,SwissProt:Q9FXD6,SwissProt:Q9ZWJ9,TAIR:AT1G67710.1,TAIR:AT3G16857.2,TAIR:AT4G16110.1,TIGRFAMs:TIGR01557,TrEMBL:B9RMP7,TrEMBL:D7TAK2,TrEMBL:I1K3I8;Derives_from=GSCOCT00038170001;Name=Cc11_g16330;Ontology_term=CC_evidence_code:ISS,GO:0000156,GO:0000160,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Putative Two-component response regulator ARR11,CC_functional_completeness:complete,CC_gene:ARR11,CC_gene:ARR1,CC_gene:ARR2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038170001~ Putative Two-component response regulator ARR11~ ARR11~ complete;original_location=join(816002..816026%2C818310..818462%2C818557..818940%2C819063..819139%2C819443..820346%2C820440..820468);owner=coffea | |
| 74761 chr11 manual_curation exon 32540934 32541332 . + . Parent=GSCOCT00038170001 | |
| 74762 chr11 manual_curation exon 32543616 32543768 . + . Parent=GSCOCT00038170001 | |
| 74763 chr11 manual_curation exon 32543863 32544246 . + . Parent=GSCOCT00038170001 | |
| 74764 chr11 manual_curation exon 32544369 32544445 . + . Parent=GSCOCT00038170001 | |
| 74765 chr11 manual_curation exon 32544749 32545652 . + . Parent=GSCOCT00038170001 | |
| 74766 chr11 manual_curation exon 32545746 32545980 . + . Parent=GSCOCT00038170001 | |
| 74767 chr11 manual_curation CDS 32541308 32541332 . + 0 Parent=GSCOCT00038170001 | |
| 74768 chr11 manual_curation CDS 32543616 32543768 . + 1 Parent=GSCOCT00038170001 | |
| 74769 chr11 manual_curation CDS 32543863 32544246 . + 1 Parent=GSCOCT00038170001 | |
| 74770 chr11 manual_curation CDS 32544369 32544445 . + 1 Parent=GSCOCT00038170001 | |
| 74771 chr11 manual_curation CDS 32544749 32545652 . + 0 Parent=GSCOCT00038170001 | |
| 74772 chr11 manual_curation CDS 32545746 32545774 . + 1 Parent=GSCOCT00038170001 | |
| 74773 chr11 manual_curation gene 32546670 32547401 . - . ID=GSCOCG00038171001;Name=Cc11_g16340 | |
| 74774 chr11 manual_curation mRNA 32546670 32547401 . - . ID=GSCOCT00038171001;Parent=GSCOCG00038171001;Name=Cc11_g16340 | |
| 74775 chr11 manual_curation polypeptide 32546926 32547374 . - . ID=GSCOCP00038171001;Derives_from=GSCOCT00038171001;Name=Cc11_g16340;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038171001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(join(821985..822068%2C821620..821832));owner=coffea | |
| 74776 chr11 manual_curation exon 32546670 32547138 . - . Parent=GSCOCT00038171001 | |
| 74777 chr11 manual_curation exon 32547291 32547401 . - . Parent=GSCOCT00038171001 | |
| 74778 chr11 manual_curation CDS 32546926 32547138 . - 0 Parent=GSCOCT00038171001 | |
| 74779 chr11 manual_curation CDS 32547291 32547374 . - 0 Parent=GSCOCT00038171001 | |
| 74780 chr11 manual_curation gene 32547638 32551134 . - . ID=GSCOCG00038172001;Name=Cc11_g16350 | |
| 74781 chr11 manual_curation mRNA 32547638 32551134 . - . ID=GSCOCT00038172001;Parent=GSCOCG00038172001;Name=Cc11_g16350 | |
| 74782 chr11 manual_curation polypeptide 32547742 32550759 . - . ID=GSCOCP00038172001;Dbxref=TAIR:AT3G01710.1,TAIR:AT3G26050.1,TAIR:AT3G27350.2,TrEMBL:B9GJA8,TrEMBL:B9RMP6,TrEMBL:D7SPX1;Derives_from=GSCOCT00038172001;Name=Cc11_g16350;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Predicted protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038172001~ Putative Predicted protein~ unknown_gene~ fragment;original_location=complement(join(825382..825453%2C823999..824553%2C823559..823915%2C823401..823459%2C823215..823289%2C822436..822604));owner=coffea | |
| 74783 chr11 manual_curation exon 32547638 32547910 . - . Parent=GSCOCT00038172001 | |
| 74784 chr11 manual_curation exon 32548521 32548595 . - . Parent=GSCOCT00038172001 | |
| 74785 chr11 manual_curation exon 32548707 32548765 . - . Parent=GSCOCT00038172001 | |
| 74786 chr11 manual_curation exon 32548865 32549221 . - . Parent=GSCOCT00038172001 | |
| 74787 chr11 manual_curation exon 32549305 32549859 . - . Parent=GSCOCT00038172001 | |
| 74788 chr11 manual_curation exon 32550688 32551134 . - . Parent=GSCOCT00038172001 | |
| 74789 chr11 manual_curation CDS 32547742 32547910 . - 2 Parent=GSCOCT00038172001 | |
| 74790 chr11 manual_curation CDS 32548521 32548595 . - 2 Parent=GSCOCT00038172001 | |
| 74791 chr11 manual_curation CDS 32548707 32548765 . - 0 Parent=GSCOCT00038172001 | |
| 74792 chr11 manual_curation CDS 32548865 32549221 . - 0 Parent=GSCOCT00038172001 | |
| 74793 chr11 manual_curation CDS 32549305 32549859 . - 0 Parent=GSCOCT00038172001 | |
| 74794 chr11 manual_curation CDS 32550688 32550759 . - 0 Parent=GSCOCT00038172001 | |
| 74795 chr11 manual_curation gene 32558504 32559717 . - . ID=GSCOCG00038174001;Name=Cc11_g16360 | |
| 74796 chr11 manual_curation mRNA 32558504 32559717 . - . ID=GSCOCT00038174001;Parent=GSCOCG00038174001;Name=Cc11_g16360 | |
| 74797 chr11 manual_curation polypeptide 32558723 32559648 . - . ID=GSCOCP00038174001;Dbxref=InterPro:IPR002068,InterPro:IPR008978,PFAM:PF00011,PROFILE:PS01031,SUPERFAMILY:SSF49764,SwissProt:P09886,SwissProt:P31170,SwissProt:Q95661,TAIR:AT1G52560.1,TAIR:AT4G25200.1,TAIR:AT4G27670.1,TrEMBL:B9HTE1,TrEMBL:B9RMP5,TrEMBL:Q8L470;Derives_from=GSCOCT00038174001;Name=Cc11_g16360;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Heat shock protein%2C putative,CC_functional_completeness:complete,CC_gene:HSP21,CC_gene:HSP25.3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038174001~ Heat shock protein%2C putative~ HSP21~ complete;original_location=complement(join(834093..834342%2C833417..833889));owner=coffea | |
| 74798 chr11 manual_curation exon 32558504 32559195 . - . Parent=GSCOCT00038174001 | |
| 74799 chr11 manual_curation exon 32559399 32559717 . - . Parent=GSCOCT00038174001 | |
| 74800 chr11 manual_curation CDS 32558723 32559195 . - 1 Parent=GSCOCT00038174001 | |
| 74801 chr11 manual_curation CDS 32559399 32559648 . - 0 Parent=GSCOCT00038174001 | |
| 74802 chr11 manual_curation gene 32561612 32562647 . - . ID=GSCOCG00038175001;Name=Cc11_g16370 | |
| 74803 chr11 manual_curation mRNA 32561612 32562647 . - . ID=GSCOCT00038175001;Parent=GSCOCG00038175001;Name=Cc11_g16370 | |
| 74804 chr11 manual_curation polypeptide 32561612 32562647 . - . ID=GSCOCP00038175001;Dbxref=GENE3D:G3DSA:1.10.10.60,InterPro:IPR001005,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR014778,InterPro:IPR015495,InterPro:IPR017930,PANTHER:PTHR10641,PFAM:PF00249,PROFILE:PS51294,SMART:SM00717,SUPERFAMILY:SSF46689,SwissProt:P80073,SwissProt:P81394,SwissProt:Q50EX6,TAIR:AT1G66230.1,TAIR:AT5G14340.1,TAIR:AT5G16600.1,TrEMBL:B9GIZ9,TrEMBL:F6GX58,TrEMBL:I1MLP5;Derives_from=GSCOCT00038175001;Name=Cc11_g16370;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:myb domain protein 40,CC_functional_completeness:fragment,CC_gene:ODO1,CC_gene:PP2,CC_gene:MYB315;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038175001~ myb domain protein 40~ ODO1~ fragment;original_location=complement(join(837209..837341%2C836947..837076%2C836683..836834%2C836306..836463));owner=coffea | |
| 74805 chr11 manual_curation exon 32561612 32561769 . - . Parent=GSCOCT00038175001 | |
| 74806 chr11 manual_curation exon 32561989 32562140 . - . Parent=GSCOCT00038175001 | |
| 74807 chr11 manual_curation exon 32562253 32562382 . - . Parent=GSCOCT00038175001 | |
| 74808 chr11 manual_curation exon 32562515 32562647 . - . Parent=GSCOCT00038175001 | |
| 74809 chr11 manual_curation CDS 32561612 32561769 . - 1 Parent=GSCOCT00038175001 | |
| 74810 chr11 manual_curation CDS 32561989 32562140 . - 2 Parent=GSCOCT00038175001 | |
| 74811 chr11 manual_curation CDS 32562253 32562382 . - 1 Parent=GSCOCT00038175001 | |
| 74812 chr11 manual_curation CDS 32562515 32562647 . - 0 Parent=GSCOCT00038175001 | |
| 74813 chr11 manual_curation gene 32563218 32567135 . + . ID=GSCOCG00038176001;Name=Cc11_g16380 | |
| 74814 chr11 manual_curation mRNA 32563218 32567135 . + . ID=GSCOCT00038176001;Parent=GSCOCG00038176001;Name=Cc11_g16380 | |
| 74815 chr11 manual_curation polypeptide 32563986 32567025 . + . ID=GSCOCP00038176001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:A6YIH8,SwissProt:O81970,SwissProt:P24465,TAIR:AT1G13080.1,TAIR:AT1G13110.1,TAIR:AT3G26210.1,TrEMBL:B9RMP3,TrEMBL:C5Z163,TrEMBL:C7FGM0;Derives_from=GSCOCT00038176001;Name=Cc11_g16380;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.88,PRODUCT:Putative Cytochrome P450 71A1,CC_functional_completeness:modules,CC_gene:CYP71A1,CC_gene:CYP71A9,CC_gene:CYP71D55;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038176001~ Putative Cytochrome P450 71A1~ CYP71A1~ modules;original_location=join(838680..838823%2C839657..840661%2C841096..841719);owner=coffea | |
| 74816 chr11 manual_curation exon 32563218 32564129 . + . Parent=GSCOCT00038176001 | |
| 74817 chr11 manual_curation exon 32564963 32565967 . + . Parent=GSCOCT00038176001 | |
| 74818 chr11 manual_curation exon 32566402 32567135 . + . Parent=GSCOCT00038176001 | |
| 74819 chr11 manual_curation CDS 32563986 32564129 . + 0 Parent=GSCOCT00038176001 | |
| 74820 chr11 manual_curation CDS 32564963 32565967 . + 0 Parent=GSCOCT00038176001 | |
| 74821 chr11 manual_curation CDS 32566402 32567025 . + 0 Parent=GSCOCT00038176001 | |
| 74822 chr11 manual_curation gene 32567189 32570381 . - . ID=GSCOCG00038177001;Name=Cc11_g16390 | |
| 74823 chr11 manual_curation mRNA 32567189 32570381 . - . ID=GSCOCT00038177001;Parent=GSCOCG00038177001;Name=Cc11_g16390 | |
| 74824 chr11 manual_curation polypeptide 32567617 32570168 . - . ID=GSCOCP00038177001;Dbxref=TAIR:AT1G67700.2,TrEMBL:B9RMP2,TrEMBL:F6HG36,TrEMBL:Q8LDL0;Derives_from=GSCOCT00038177001;Name=Cc11_g16390;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038177001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%2C chloroplast envelope%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B Has 49 Blast hits to 49 proteins in 20 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 44%3B Viruses - 0%3B Other Eukaryotes - 5 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(844593..844862%2C844170..844307%2C843619..843705%2C843447..843494%2C842421..842572%2C842311..842323));owner=coffea | |
| 74825 chr11 manual_curation exon 32567189 32567629 . - . Parent=GSCOCT00038177001 | |
| 74826 chr11 manual_curation exon 32567727 32567878 . - . Parent=GSCOCT00038177001 | |
| 74827 chr11 manual_curation exon 32568753 32568800 . - . Parent=GSCOCT00038177001 | |
| 74828 chr11 manual_curation exon 32568925 32569011 . - . Parent=GSCOCT00038177001 | |
| 74829 chr11 manual_curation exon 32569476 32569613 . - . Parent=GSCOCT00038177001 | |
| 74830 chr11 manual_curation exon 32569899 32570381 . - . Parent=GSCOCT00038177001 | |
| 74831 chr11 manual_curation CDS 32567617 32567629 . - 2 Parent=GSCOCT00038177001 | |
| 74832 chr11 manual_curation CDS 32567727 32567878 . - 0 Parent=GSCOCT00038177001 | |
| 74833 chr11 manual_curation CDS 32568753 32568800 . - 0 Parent=GSCOCT00038177001 | |
| 74834 chr11 manual_curation CDS 32568925 32569011 . - 0 Parent=GSCOCT00038177001 | |
| 74835 chr11 manual_curation CDS 32569476 32569613 . - 0 Parent=GSCOCT00038177001 | |
| 74836 chr11 manual_curation CDS 32569899 32570168 . - 0 Parent=GSCOCT00038177001 | |
| 74837 chr11 manual_curation gene 32571002 32572510 . - . ID=GSCOCG00038178001;Name=Cc11_g16400 | |
| 74838 chr11 manual_curation mRNA 32571002 32572510 . - . ID=GSCOCT00038178001;Parent=GSCOCG00038178001;Name=Cc11_g16400 | |
| 74839 chr11 manual_curation polypeptide 32571002 32572510 . - . ID=GSCOCP00038178001;Dbxref=InterPro:IPR005202,PFAM:PF03514,PROFILE:PS50985,SwissProt:Q5BN22,SwissProt:Q8S4W7,SwissProt:Q9LQT8,TAIR:AT1G14920.1,TAIR:AT1G66350.1,TAIR:AT2G01570.1,TrEMBL:B9I3M1,TrEMBL:B9IF61,TrEMBL:F6GSG2;Derives_from=GSCOCT00038178001;Name=Cc11_g16400;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:GRAS family transcription factor,CC_functional_completeness:complete,CC_gene:GAI1,CC_gene:GAI,CC_gene:RGA2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038178001~ GRAS family transcription factor~ GAI1~ complete;original_location=complement(845696..847204);owner=coffea | |
| 74840 chr11 manual_curation exon 32571002 32572510 . - . Parent=GSCOCT00038178001 | |
| 74841 chr11 manual_curation CDS 32571002 32572510 . - 0 Parent=GSCOCT00038178001 | |
| 74842 chr11 manual_curation gene 32573981 32576636 . - . ID=GSCOCG00038180001;Name=Cc11_g16410 | |
| 74843 chr11 manual_curation mRNA 32573981 32576636 . - . ID=GSCOCT00038180001;Parent=GSCOCG00038180001;Name=Cc11_g16410 | |
| 74844 chr11 manual_curation polypeptide 32573981 32576413 . - . ID=GSCOCP00038180001;Dbxref=InterPro:IPR013094,PFAM:PF07859,SwissProt:Q8LED9,SwissProt:Q9LK21,SwissProt:Q9LYC1,TAIR:AT3G27320.1,TAIR:AT3G63010.1,TAIR:AT5G14310.1,TrEMBL:F6GX55,TrEMBL:I1K136,TrEMBL:Q0ZPV1;Derives_from=GSCOCT00038180001;Name=Cc11_g16410;Ontology_term=CC_evidence_code:ISS,GO:0008152,GO:0016787,CC_EC_number:missing_EC_number,PRODUCT:Probable carboxylesterase 16,CC_functional_completeness:complete,CC_gene:CXE16,CC_gene:CXE11,CC_gene:GID1B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038180001~ Probable carboxylesterase 16~ CXE16~ complete;original_location=complement(join(850380..851107%2C848675..849212));owner=coffea | |
| 74845 chr11 manual_curation exon 32573981 32574518 . - . Parent=GSCOCT00038180001 | |
| 74846 chr11 manual_curation exon 32575686 32576636 . - . Parent=GSCOCT00038180001 | |
| 74847 chr11 manual_curation CDS 32573981 32574518 . - 2 Parent=GSCOCT00038180001 | |
| 74848 chr11 manual_curation CDS 32575686 32576413 . - 0 Parent=GSCOCT00038180001 | |
| 74849 chr11 manual_curation gene 32580671 32582002 . + . ID=GSCOCG00038181001;Name=Cc11_g16420 | |
| 74850 chr11 manual_curation mRNA 32580671 32582002 . + . ID=GSCOCT00038181001;Parent=GSCOCG00038181001;Name=Cc11_g16420 | |
| 74851 chr11 manual_curation polypeptide 32580671 32582002 . + . ID=GSCOCP00038181001;Dbxref=InterPro:IPR003480,PFAM:PF02458,SwissProt:Q70PR7,SwissProt:Q94FT4,SwissProt:Q9ZTK5,TAIR:AT1G24430.1,TAIR:AT3G26040.1,TAIR:AT3G30280.1,TrEMBL:B9HTD4,TrEMBL:B9RML1,TrEMBL:D7TAL3;Derives_from=GSCOCT00038181001;Name=Cc11_g16420;Ontology_term=CC_evidence_code:ISS,CC_EC_number:2.3.1.150,PRODUCT:Putative Salutaridinol 7-O-acetyltransferase,CC_functional_completeness:complete,CC_gene:SALAT,CC_gene:ACT,CC_gene:DAT;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038181001~ Putative Salutaridinol 7-O-acetyltransferase~ SALAT~ complete;original_location=855365..856696;owner=coffea | |
| 74852 chr11 manual_curation exon 32580671 32582002 . + . Parent=GSCOCT00038181001 | |
| 74853 chr11 manual_curation CDS 32580671 32582002 . + 0 Parent=GSCOCT00038181001 | |
| 74854 chr11 manual_curation gene 32585858 32589815 . - . ID=GSCOCG00038183001;Name=Cc11_g16430 | |
| 74855 chr11 manual_curation mRNA 32585858 32589815 . - . ID=GSCOCT00038183001;Parent=GSCOCG00038183001;Name=Cc11_g16430 | |
| 74856 chr11 manual_curation polypeptide 32586251 32588976 . - . ID=GSCOCP00038183001;Dbxref=InterPro:IPR002554,PANTHER:PTHR10257,PFAM:PF01603,PIR:PIRSF028043,SwissProt:Q8LF36,SwissProt:Q8RW96,SwissProt:Q9LU89,TAIR:AT1G13460.1,TAIR:AT3G21650.1,TAIR:AT4G15415.2,TrEMBL:A5BUF9,TrEMBL:B9HTC9,TrEMBL:F6HG37;Derives_from=GSCOCT00038183001;Name=Cc11_g16430;Ontology_term=CC_evidence_code:ISS,GO:0000159,GO:0007165,GO:0008601,CC_EC_number:missing_EC_number,PRODUCT:Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform,CC_functional_completeness:complete,CC_gene:B'ETA,CC_gene:B'THETA,CC_gene:B'GAMMA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038183001~ Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform~ B'ETA~ complete;original_location=complement(join(862474..863670%2C860945..861298));owner=coffea | |
| 74857 chr11 manual_curation exon 32585858 32586604 . - . Parent=GSCOCT00038183001 | |
| 74858 chr11 manual_curation exon 32587780 32589815 . - . Parent=GSCOCT00038183001 | |
| 74859 chr11 manual_curation CDS 32586251 32586604 . - 0 Parent=GSCOCT00038183001 | |
| 74860 chr11 manual_curation CDS 32587780 32588976 . - 0 Parent=GSCOCT00038183001 | |
| 74861 chr11 manual_curation gene 32591465 32600939 . - . ID=GSCOCG00038184001;Name=Cc11_g16440 | |
| 74862 chr11 manual_curation mRNA 32591465 32600939 . - . ID=GSCOCT00038184001;Parent=GSCOCG00038184001;Name=Cc11_g16440 | |
| 74863 chr11 manual_curation polypeptide 32591759 32600891 . - . ID=GSCOCP00038184001;Dbxref=InterPro:IPR001567,PFAM:PF01432,SwissProt:P42675,SwissProt:P42676,SwissProt:Q91YP2,TAIR:AT1G67690.1,TAIR:AT5G51540.1,TAIR:AT5G65620.1,TrEMBL:B9HTC7,TrEMBL:B9RMK4,TrEMBL:D7TAL7;Derives_from=GSCOCT00038184001;Name=Cc11_g16440;Ontology_term=CC_evidence_code:ISS,GO:0004222,GO:0006508,CC_EC_number:3.4.24.15,PRODUCT:Putative Neurolysin%2C mitochondrial,CC_functional_completeness:complete,CC_gene:NLN,CC_gene:Nln;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038184001~ Putative Neurolysin%2C mitochondrial~ NLN~ complete;original_location=complement(join(875447..875585%2C875145..875266%2C874618..874781%2C873706..873796%2C873126..873305%2C872659..872739%2C871947..872024%2C871227..871319%2C870590..870670%2C870301..870463%2C870083..870203%2C869920..869989%2C869269..869376%2C869081..869178%2C868945..868990%2C868623..868719%2C867712..867785%2C867528..867632%2C866782..866862%2C866453..866560));owner=coffea | |
| 74864 chr11 manual_curation exon 32591465 32591866 . - . Parent=GSCOCT00038184001 | |
| 74865 chr11 manual_curation exon 32592088 32592168 . - . Parent=GSCOCT00038184001 | |
| 74866 chr11 manual_curation exon 32592834 32592938 . - . Parent=GSCOCT00038184001 | |
| 74867 chr11 manual_curation exon 32593018 32593091 . - . Parent=GSCOCT00038184001 | |
| 74868 chr11 manual_curation exon 32593929 32594025 . - . Parent=GSCOCT00038184001 | |
| 74869 chr11 manual_curation exon 32594251 32594296 . - . Parent=GSCOCT00038184001 | |
| 74870 chr11 manual_curation exon 32594387 32594484 . - . Parent=GSCOCT00038184001 | |
| 74871 chr11 manual_curation exon 32594575 32594682 . - . Parent=GSCOCT00038184001 | |
| 74872 chr11 manual_curation exon 32595226 32595295 . - . Parent=GSCOCT00038184001 | |
| 74873 chr11 manual_curation exon 32595389 32595509 . - . Parent=GSCOCT00038184001 | |
| 74874 chr11 manual_curation exon 32595607 32595769 . - . Parent=GSCOCT00038184001 | |
| 74875 chr11 manual_curation exon 32595896 32595976 . - . Parent=GSCOCT00038184001 | |
| 74876 chr11 manual_curation exon 32596533 32596625 . - . Parent=GSCOCT00038184001 | |
| 74877 chr11 manual_curation exon 32597253 32597330 . - . Parent=GSCOCT00038184001 | |
| 74878 chr11 manual_curation exon 32597965 32598045 . - . Parent=GSCOCT00038184001 | |
| 74879 chr11 manual_curation exon 32598432 32598611 . - . Parent=GSCOCT00038184001 | |
| 74880 chr11 manual_curation exon 32599012 32599102 . - . Parent=GSCOCT00038184001 | |
| 74881 chr11 manual_curation exon 32599924 32600087 . - . Parent=GSCOCT00038184001 | |
| 74882 chr11 manual_curation exon 32600451 32600572 . - . Parent=GSCOCT00038184001 | |
| 74883 chr11 manual_curation exon 32600753 32600939 . - . Parent=GSCOCT00038184001 | |
| 74884 chr11 manual_curation CDS 32591759 32591866 . - 0 Parent=GSCOCT00038184001 | |
| 74885 chr11 manual_curation CDS 32592088 32592168 . - 0 Parent=GSCOCT00038184001 | |
| 74886 chr11 manual_curation CDS 32592834 32592938 . - 0 Parent=GSCOCT00038184001 | |
| 74887 chr11 manual_curation CDS 32593018 32593091 . - 1 Parent=GSCOCT00038184001 | |
| 74888 chr11 manual_curation CDS 32593929 32594025 . - 0 Parent=GSCOCT00038184001 | |
| 74889 chr11 manual_curation CDS 32594251 32594296 . - 2 Parent=GSCOCT00038184001 | |
| 74890 chr11 manual_curation CDS 32594387 32594484 . - 0 Parent=GSCOCT00038184001 | |
| 74891 chr11 manual_curation CDS 32594575 32594682 . - 0 Parent=GSCOCT00038184001 | |
| 74892 chr11 manual_curation CDS 32595226 32595295 . - 2 Parent=GSCOCT00038184001 | |
| 74893 chr11 manual_curation CDS 32595389 32595509 . - 1 Parent=GSCOCT00038184001 | |
| 74894 chr11 manual_curation CDS 32595607 32595769 . - 0 Parent=GSCOCT00038184001 | |
| 74895 chr11 manual_curation CDS 32595896 32595976 . - 0 Parent=GSCOCT00038184001 | |
| 74896 chr11 manual_curation CDS 32596533 32596625 . - 0 Parent=GSCOCT00038184001 | |
| 74897 chr11 manual_curation CDS 32597253 32597330 . - 0 Parent=GSCOCT00038184001 | |
| 74898 chr11 manual_curation CDS 32597965 32598045 . - 0 Parent=GSCOCT00038184001 | |
| 74899 chr11 manual_curation CDS 32598432 32598611 . - 0 Parent=GSCOCT00038184001 | |
| 74900 chr11 manual_curation CDS 32599012 32599102 . - 2 Parent=GSCOCT00038184001 | |
| 74901 chr11 manual_curation CDS 32599924 32600087 . - 0 Parent=GSCOCT00038184001 | |
| 74902 chr11 manual_curation CDS 32600451 32600572 . - 1 Parent=GSCOCT00038184001 | |
| 74903 chr11 manual_curation CDS 32600753 32600891 . - 0 Parent=GSCOCT00038184001 | |
| 74904 chr11 manual_curation gene 32603487 32607174 . + . ID=GSCOCG00038185001;Name=Cc11_g16450 | |
| 74905 chr11 manual_curation mRNA 32603487 32607174 . + . ID=GSCOCT00038185001;Parent=GSCOCG00038185001;Name=Cc11_g16450 | |
| 74906 chr11 manual_curation polypeptide 32604330 32606667 . + . ID=GSCOCP00038185001;Dbxref=InterPro:IPR022364,SUPERFAMILY:SSF81383,SwissProt:Q9LK24,SwissProt:Q9LU91,SwissProt:Q9ZU90,TAIR:AT2G01620.1,TAIR:AT3G26000.1,TAIR:AT3G27290.1,TrEMBL:B9HTC6,TrEMBL:B9RMK2,TrEMBL:F6HG39;Derives_from=GSCOCT00038185001;Name=Cc11_g16450;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative F-box protein SKIP14,CC_functional_completeness:complete,CC_gene:SKIP14,CC_gene:At3g27290,CC_gene:SKIP28;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038185001~ Putative F-box protein SKIP14~ SKIP14~ complete;original_location=join(879024..879125%2C879189..879956%2C880846..881361);owner=coffea | |
| 74907 chr11 manual_curation exon 32603487 32604431 . + . Parent=GSCOCT00038185001 | |
| 74908 chr11 manual_curation exon 32604495 32605262 . + . Parent=GSCOCT00038185001 | |
| 74909 chr11 manual_curation exon 32606152 32607174 . + . Parent=GSCOCT00038185001 | |
| 74910 chr11 manual_curation CDS 32604330 32604431 . + 0 Parent=GSCOCT00038185001 | |
| 74911 chr11 manual_curation CDS 32604495 32605262 . + 0 Parent=GSCOCT00038185001 | |
| 74912 chr11 manual_curation CDS 32606152 32606667 . + 0 Parent=GSCOCT00038185001 | |
| 74913 chr11 manual_curation gene 32609697 32609879 . - . ID=GSCOCG00038186001;Name=Cc11_g16460 | |
| 74914 chr11 manual_curation mRNA 32609697 32609879 . - . ID=GSCOCT00038186001;Parent=GSCOCG00038186001;Name=Cc11_g16460 | |
| 74915 chr11 manual_curation polypeptide 32609697 32609879 . - . ID=GSCOCP00038186001;Derives_from=GSCOCT00038186001;Name=Cc11_g16460;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038186001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(884391..884573);owner=coffea | |
| 74916 chr11 manual_curation exon 32609697 32609879 . - . Parent=GSCOCT00038186001 | |
| 74917 chr11 manual_curation CDS 32609697 32609879 . - 0 Parent=GSCOCT00038186001 | |
| 74918 chr11 manual_curation gene 32611047 32615592 . - . ID=GSCOCG00038187001;Name=Cc11_g16470 | |
| 74919 chr11 manual_curation mRNA 32611047 32615592 . - . ID=GSCOCT00038187001;Parent=GSCOCG00038187001;Name=Cc11_g16470 | |
| 74920 chr11 manual_curation polypeptide 32611328 32615485 . - . ID=GSCOCP00038187001;Dbxref=InterPro:IPR001005,InterPro:IPR017877,PROFILE:PS50090,SMART:SM00717,SwissProt:Q9FX53,SwissProt:Q9LU92,SwissProt:Q9SDW0,TAIR:AT1G13450.1,TAIR:AT3G25990.1,TAIR:AT5G01380.1,TrEMBL:I1LNC2,TrEMBL:Q43326,TrEMBL:Q7DMS9;Derives_from=GSCOCT00038187001;Name=Cc11_g16470;Ontology_term=CC_evidence_code:ISS,GO:0003677,CC_EC_number:missing_EC_number,PRODUCT:Trihelix transcription factor GT-1,CC_functional_completeness:complete,CC_gene:GT-1,CC_gene:GT-4,CC_gene:GT-3A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038187001~ Trihelix transcription factor GT-1~ GT-1~ complete;original_location=complement(join(889579..890179%2C888770..888808%2C887586..887717%2C886529..886756%2C886022..886230));owner=coffea | |
| 74921 chr11 manual_curation exon 32611047 32611536 . - . Parent=GSCOCT00038187001 | |
| 74922 chr11 manual_curation exon 32611835 32612062 . - . Parent=GSCOCT00038187001 | |
| 74923 chr11 manual_curation exon 32612892 32613023 . - . Parent=GSCOCT00038187001 | |
| 74924 chr11 manual_curation exon 32614076 32614114 . - . Parent=GSCOCT00038187001 | |
| 74925 chr11 manual_curation exon 32614885 32615592 . - . Parent=GSCOCT00038187001 | |
| 74926 chr11 manual_curation CDS 32611328 32611536 . - 1 Parent=GSCOCT00038187001 | |
| 74927 chr11 manual_curation CDS 32611835 32612062 . - 1 Parent=GSCOCT00038187001 | |
| 74928 chr11 manual_curation CDS 32612892 32613023 . - 1 Parent=GSCOCT00038187001 | |
| 74929 chr11 manual_curation CDS 32614076 32614114 . - 1 Parent=GSCOCT00038187001 | |
| 74930 chr11 manual_curation CDS 32614885 32615485 . - 0 Parent=GSCOCT00038187001 | |
| 74931 chr11 manual_curation gene 32616811 32618472 . - . ID=GSCOCG00038188001;Name=Cc11_g16480 | |
| 74932 chr11 manual_curation mRNA 32616811 32618472 . - . ID=GSCOCT00038188001;Parent=GSCOCG00038188001;Name=Cc11_g16480 | |
| 74933 chr11 manual_curation polypeptide 32617101 32618319 . - . ID=GSCOCP00038188001;Dbxref=InterPro:IPR003511,PFAM:PF02301,PROFILE:PS50815,SUPERFAMILY:SSF56019,SwissProt:Q556Y9,SwissProt:Q9LU93,SwissProt:Q9XFH3,TAIR:AT3G25980.1,TrEMBL:D7TAM3,TrEMBL:I1LNB9,TrEMBL:I1MYJ1;Derives_from=GSCOCT00038188001;Name=Cc11_g16480;Ontology_term=CC_evidence_code:ISS,GO:0007067,CC_EC_number:missing_EC_number,PRODUCT:Mitotic spindle checkpoint protein MAD2,CC_functional_completeness:complete,CC_gene:MAD2,CC_gene:mad2l1-1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038188001~ Mitotic spindle checkpoint protein MAD2~ MAD2~ complete;original_location=complement(join(892941..893013%2C892816..892831%2C892581..892711%2C892372..892492%2C892171..892274%2C891944..892065%2C891795..891851));owner=coffea | |
| 74934 chr11 manual_curation exon 32616811 32617157 . - . Parent=GSCOCT00038188001 | |
| 74935 chr11 manual_curation exon 32617250 32617371 . - . Parent=GSCOCT00038188001 | |
| 74936 chr11 manual_curation exon 32617477 32617580 . - . Parent=GSCOCT00038188001 | |
| 74937 chr11 manual_curation exon 32617678 32617798 . - . Parent=GSCOCT00038188001 | |
| 74938 chr11 manual_curation exon 32617887 32618017 . - . Parent=GSCOCT00038188001 | |
| 74939 chr11 manual_curation exon 32618122 32618137 . - . Parent=GSCOCT00038188001 | |
| 74940 chr11 manual_curation exon 32618247 32618472 . - . Parent=GSCOCT00038188001 | |
| 74941 chr11 manual_curation CDS 32617101 32617157 . - 0 Parent=GSCOCT00038188001 | |
| 74942 chr11 manual_curation CDS 32617250 32617371 . - 1 Parent=GSCOCT00038188001 | |
| 74943 chr11 manual_curation CDS 32617477 32617580 . - 2 Parent=GSCOCT00038188001 | |
| 74944 chr11 manual_curation CDS 32617678 32617798 . - 1 Parent=GSCOCT00038188001 | |
| 74945 chr11 manual_curation CDS 32617887 32618017 . - 2 Parent=GSCOCT00038188001 | |
| 74946 chr11 manual_curation CDS 32618122 32618137 . - 1 Parent=GSCOCT00038188001 | |
| 74947 chr11 manual_curation CDS 32618247 32618319 . - 0 Parent=GSCOCT00038188001 | |
| 74948 chr11 manual_curation gene 32623188 32629270 . + . ID=GSCOCG00038189001;Name=Cc11_g16490 | |
| 74949 chr11 manual_curation mRNA 32623188 32629270 . + . ID=GSCOCT00038189001;Parent=GSCOCG00038189001;Name=Cc11_g16490 | |
| 74950 chr11 manual_curation polypeptide 32623188 32629270 . + . ID=GSCOCP00038189001;Dbxref=InterPro:IPR001140,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR011527,InterPro:IPR017871,InterPro:IPR017940,PFAM:PF00005,PFAM:PF00664,PROFILE:PS50893,PROFILE:PS50929,PROSITE:PS00211,SMART:SM00382,SUPERFAMILY:SSF90123,SwissProt:Q7GB25,SwissProt:Q8VZZ4,SwissProt:Q9LK64,TAIR:AT1G04120.1,TAIR:AT3G13080.1,TAIR:AT3G13090.1,TrEMBL:B9HLA5,TrEMBL:B9RMN4,TrEMBL:I1KRY8;Derives_from=GSCOCT00038189001;Name=Cc11_g16490;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0006810,GO:0016021,GO:0016887,GO:0017111,GO:0055085,CC_EC_number:3.6.3.44,CC_EC_number:3.6.3.44,PRODUCT:Putative ABC transporter C family member 3,CC_functional_completeness:complete,CC_gene:ABCC3,CC_gene:ABCC5,CC_gene:ABCC6;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038189001~ Putative ABC transporter C family member 3~ ABCC3~ complete;original_location=join(897882..898704%2C898980..900389%2C900470..900600%2C900694..901296%2C901393..901557%2C901737..902031%2C902397..902917%2C902999..903062%2C903237..903476%2C903840..903964);owner=coffea | |
| 74951 chr11 manual_curation exon 32623188 32624010 . + . Parent=GSCOCT00038189001 | |
| 74952 chr11 manual_curation exon 32624286 32625695 . + . Parent=GSCOCT00038189001 | |
| 74953 chr11 manual_curation exon 32625776 32625906 . + . Parent=GSCOCT00038189001 | |
| 74954 chr11 manual_curation exon 32626000 32626602 . + . Parent=GSCOCT00038189001 | |
| 74955 chr11 manual_curation exon 32626699 32626863 . + . Parent=GSCOCT00038189001 | |
| 74956 chr11 manual_curation exon 32627043 32627337 . + . Parent=GSCOCT00038189001 | |
| 74957 chr11 manual_curation exon 32627703 32628223 . + . Parent=GSCOCT00038189001 | |
| 74958 chr11 manual_curation exon 32628305 32628368 . + . Parent=GSCOCT00038189001 | |
| 74959 chr11 manual_curation exon 32628543 32628782 . + . Parent=GSCOCT00038189001 | |
| 74960 chr11 manual_curation exon 32629146 32629270 . + . Parent=GSCOCT00038189001 | |
| 74961 chr11 manual_curation CDS 32623188 32624010 . + 0 Parent=GSCOCT00038189001 | |
| 74962 chr11 manual_curation CDS 32624286 32625695 . + 1 Parent=GSCOCT00038189001 | |
| 74963 chr11 manual_curation CDS 32625776 32625906 . + 1 Parent=GSCOCT00038189001 | |
| 74964 chr11 manual_curation CDS 32626000 32626602 . + 0 Parent=GSCOCT00038189001 | |
| 74965 chr11 manual_curation CDS 32626699 32626863 . + 0 Parent=GSCOCT00038189001 | |
| 74966 chr11 manual_curation CDS 32627043 32627337 . + 0 Parent=GSCOCT00038189001 | |
| 74967 chr11 manual_curation CDS 32627703 32628223 . + 1 Parent=GSCOCT00038189001 | |
| 74968 chr11 manual_curation CDS 32628305 32628368 . + 0 Parent=GSCOCT00038189001 | |
| 74969 chr11 manual_curation CDS 32628543 32628782 . + 1 Parent=GSCOCT00038189001 | |
| 74970 chr11 manual_curation CDS 32629146 32629270 . + 1 Parent=GSCOCT00038189001 | |
| 74971 chr11 manual_curation gene 32631416 32632357 . - . ID=GSCOCG00038190001;Name=Cc11_g16500 | |
| 74972 chr11 manual_curation mRNA 32631416 32632357 . - . ID=GSCOCT00038190001;Parent=GSCOCG00038190001;Name=Cc11_g16500 | |
| 74973 chr11 manual_curation polypeptide 32631514 32632277 . - . ID=GSCOCP00038190001;Dbxref=InterPro:IPR010530,PFAM:PF06522,TAIR:AT3G29970.1,TAIR:AT3G48140.1,TrEMBL:B9HLA4,TrEMBL:C6T1F7,TrEMBL:D7TAM5;Derives_from=GSCOCT00038190001;Name=Cc11_g16500;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:B12D protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038190001~ B12D protein~ unknown_gene~ complete;original_location=complement(join(906939..906971%2C906633..906721%2C906208..906355));owner=coffea | |
| 74974 chr11 manual_curation exon 32631416 32631661 . - . Parent=GSCOCT00038190001 | |
| 74975 chr11 manual_curation exon 32631939 32632027 . - . Parent=GSCOCT00038190001 | |
| 74976 chr11 manual_curation exon 32632245 32632357 . - . Parent=GSCOCT00038190001 | |
| 74977 chr11 manual_curation CDS 32631514 32631661 . - 2 Parent=GSCOCT00038190001 | |
| 74978 chr11 manual_curation CDS 32631939 32632027 . - 0 Parent=GSCOCT00038190001 | |
| 74979 chr11 manual_curation CDS 32632245 32632277 . - 0 Parent=GSCOCT00038190001 | |
| 74980 chr11 manual_curation gene 32633565 32637189 . + . ID=GSCOCG00038191001;Name=Cc11_g16510 | |
| 74981 chr11 manual_curation mRNA 32633565 32637189 . + . ID=GSCOCT00038191001;Parent=GSCOCG00038191001;Name=Cc11_g16510 | |
| 74982 chr11 manual_curation polypeptide 32633804 32636259 . + . ID=GSCOCP00038191001;Dbxref=InterPro:IPR006424,InterPro:IPR020828,InterPro:IPR020829,InterPro:IPR020830,InterPro:IPR020831,PANTHER:PTHR10836,PFAM:PF00044,PFAM:PF02800,PIR:PIRSF000149,PRINTS:PR00078,PROSITE:PS00071,SMART:SM00846,SwissProt:P25861,SwissProt:P26518,SwissProt:P26520,TAIR:AT1G13440.1,TAIR:AT1G79530.1,TAIR:AT3G04120.1,TIGRFAMs:TIGR01534,TrEMBL:B9RAL0,TrEMBL:F6GSG7,TrEMBL:H9U0F9;Derives_from=GSCOCT00038191001;Name=Cc11_g16510;Ontology_term=CC_evidence_code:ISS,GO:0006006,GO:0008943,GO:0051287,GO:0055114,CC_EC_number:1.2.1.12,PRODUCT:Glyceraldehyde-3-phosphate dehydrogenase%2C cytosolic,CC_functional_completeness:complete,CC_gene:GAPC;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038191001~ Glyceraldehyde-3-phosphate dehydrogenase%2C cytosolic~ GAPC~ complete;original_location=join(908498..908525%2C908659..908759%2C908957..909072%2C909179..909278%2C909550..909696%2C909793..909853%2C909948..910045%2C910246..910388%2C910534..910617%2C910696..910785%2C910905..910953);owner=coffea | |
| 74983 chr11 manual_curation exon 32633565 32633831 . + . Parent=GSCOCT00038191001 | |
| 74984 chr11 manual_curation exon 32633965 32634065 . + . Parent=GSCOCT00038191001 | |
| 74985 chr11 manual_curation exon 32634263 32634378 . + . Parent=GSCOCT00038191001 | |
| 74986 chr11 manual_curation exon 32634485 32634584 . + . Parent=GSCOCT00038191001 | |
| 74987 chr11 manual_curation exon 32634856 32635002 . + . Parent=GSCOCT00038191001 | |
| 74988 chr11 manual_curation exon 32635099 32635159 . + . Parent=GSCOCT00038191001 | |
| 74989 chr11 manual_curation exon 32635254 32635351 . + . Parent=GSCOCT00038191001 | |
| 74990 chr11 manual_curation exon 32635552 32635694 . + . Parent=GSCOCT00038191001 | |
| 74991 chr11 manual_curation exon 32635840 32635923 . + . Parent=GSCOCT00038191001 | |
| 74992 chr11 manual_curation exon 32636002 32636091 . + . Parent=GSCOCT00038191001 | |
| 74993 chr11 manual_curation exon 32636211 32637189 . + . Parent=GSCOCT00038191001 | |
| 74994 chr11 manual_curation CDS 32633804 32633831 . + 0 Parent=GSCOCT00038191001 | |
| 74995 chr11 manual_curation CDS 32633965 32634065 . + 1 Parent=GSCOCT00038191001 | |
| 74996 chr11 manual_curation CDS 32634263 32634378 . + 0 Parent=GSCOCT00038191001 | |
| 74997 chr11 manual_curation CDS 32634485 32634584 . + 2 Parent=GSCOCT00038191001 | |
| 74998 chr11 manual_curation CDS 32634856 32635002 . + 0 Parent=GSCOCT00038191001 | |
| 74999 chr11 manual_curation CDS 32635099 32635159 . + 0 Parent=GSCOCT00038191001 | |
| 75000 chr11 manual_curation CDS 32635254 32635351 . + 1 Parent=GSCOCT00038191001 | |
| 75001 chr11 manual_curation CDS 32635552 32635694 . + 0 Parent=GSCOCT00038191001 | |
| 75002 chr11 manual_curation CDS 32635840 32635923 . + 2 Parent=GSCOCT00038191001 | |
| 75003 chr11 manual_curation CDS 32636002 32636091 . + 2 Parent=GSCOCT00038191001 | |
| 75004 chr11 manual_curation CDS 32636211 32636259 . + 2 Parent=GSCOCT00038191001 | |
| 75005 chr11 manual_curation gene 32647054 32647374 . - . ID=GSCOCG00038192001;Name=Cc11_g16520 | |
| 75006 chr11 manual_curation mRNA 32647054 32647374 . - . ID=GSCOCT00038192001;Parent=GSCOCG00038192001;Name=Cc11_g16520 | |
| 75007 chr11 manual_curation polypeptide 32647054 32647374 . - . ID=GSCOCP00038192001;Dbxref=InterPro:IPR001813,PFAM:PF00428,SwissProt:O24415,SwissProt:P46252,SwissProt:Q9LXM8,TAIR:AT2G27710.1,TAIR:AT3G28500.1,TAIR:AT3G44590.2,TrEMBL:A9PAR7,TrEMBL:A9PCM7,TrEMBL:D7LMJ6;Derives_from=GSCOCT00038192001;Name=Cc11_g16520;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006414,CC_EC_number:missing_EC_number,PRODUCT:60S acidic ribosomal protein P2-4,CC_functional_completeness:complete,CC_gene:RPP2D,CC_gene:RPP2B,CC_gene:RPP2A;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038192001~ 60S acidic ribosomal protein P2-4~ RPP2D~ complete;original_location=complement(921748..922068);owner=coffea | |
| 75008 chr11 manual_curation exon 32647054 32647374 . - . Parent=GSCOCT00038192001 | |
| 75009 chr11 manual_curation CDS 32647054 32647374 . - 0 Parent=GSCOCT00038192001 | |
| 75010 chr11 manual_curation gene 32650051 32654136 . + . ID=GSCOCG00038193001;Name=Cc11_g16530 | |
| 75011 chr11 manual_curation mRNA 32650051 32654136 . + . ID=GSCOCT00038193001;Parent=GSCOCG00038193001;Name=Cc11_g16530 | |
| 75012 chr11 manual_curation polypeptide 32650538 32653968 . + . ID=GSCOCP00038193001;Dbxref=GENE3D:G3DSA:1.25.40.20,InterPro:IPR002110,InterPro:IPR020683,PFAM:PF00023,PROFILE:PS50088,PROFILE:PS50297,SMART:SM00248,SUPERFAMILY:SSF48403,SwissProt:Q6GNY1,SwissProt:Q80SY4,SwissProt:Q86YT6,TAIR:AT2G31820.1,TAIR:AT3G01750.1,TAIR:AT3G04140.1,TrEMBL:A5BD19,TrEMBL:B9HLA2,TrEMBL:D5G0H2;Derives_from=GSCOCT00038193001;Name=Cc11_g16530;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Ankyrin repeat family protein,CC_functional_completeness:complete,CC_gene:Mib1,CC_gene:mib1,CC_gene:MIB1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038193001~ Ankyrin repeat family protein~ Mib1~ complete;original_location=join(925232..925939%2C927349..928485%2C928534..928662);owner=coffea | |
| 75013 chr11 manual_curation exon 32650051 32651245 . + . Parent=GSCOCT00038193001 | |
| 75014 chr11 manual_curation exon 32652655 32653791 . + . Parent=GSCOCT00038193001 | |
| 75015 chr11 manual_curation exon 32653840 32654136 . + . Parent=GSCOCT00038193001 | |
| 75016 chr11 manual_curation CDS 32650538 32651245 . + 0 Parent=GSCOCT00038193001 | |
| 75017 chr11 manual_curation CDS 32652655 32653791 . + 0 Parent=GSCOCT00038193001 | |
| 75018 chr11 manual_curation CDS 32653840 32653968 . + 0 Parent=GSCOCT00038193001 | |
| 75019 chr11 manual_curation gene 32655301 32657486 . + . ID=GSCOCG00038194001;Name=Cc11_g16540 | |
| 75020 chr11 manual_curation mRNA 32655301 32657486 . + . ID=GSCOCT00038194001;Parent=GSCOCG00038194001;Name=Cc11_g16540 | |
| 75021 chr11 manual_curation polypeptide 32655301 32657486 . + . ID=GSCOCP00038194001;Dbxref=InterPro:IPR013057,PFAM:PF01490,SwissProt:Q9FKS8,SwissProt:Q9LRB5,SwissProt:Q9SR44,TAIR:AT1G24400.1,TAIR:AT1G67640.1,TAIR:AT5G40780.1,TrEMBL:B9HLA1,TrEMBL:D7MJ37,TrEMBL:I1N7L1;Derives_from=GSCOCT00038194001;Name=Cc11_g16540;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Lysine histidine transporter 1,CC_functional_completeness:complete,CC_gene:LHT1,CC_gene:LHT2,CC_gene:At1g67640;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038194001~ Lysine histidine transporter 1~ LHT1~ complete;original_location=join(929995..930164%2C930374..930763%2C930974..931367%2C931530..931635%2C931731..931822%2C931907..931975%2C932082..932180);owner=coffea | |
| 75022 chr11 manual_curation exon 32655301 32655470 . + . Parent=GSCOCT00038194001 | |
| 75023 chr11 manual_curation exon 32655680 32656069 . + . Parent=GSCOCT00038194001 | |
| 75024 chr11 manual_curation exon 32656280 32656673 . + . Parent=GSCOCT00038194001 | |
| 75025 chr11 manual_curation exon 32656836 32656941 . + . Parent=GSCOCT00038194001 | |
| 75026 chr11 manual_curation exon 32657037 32657128 . + . Parent=GSCOCT00038194001 | |
| 75027 chr11 manual_curation exon 32657213 32657281 . + . Parent=GSCOCT00038194001 | |
| 75028 chr11 manual_curation exon 32657388 32657486 . + . Parent=GSCOCT00038194001 | |
| 75029 chr11 manual_curation CDS 32655301 32655470 . + 0 Parent=GSCOCT00038194001 | |
| 75030 chr11 manual_curation CDS 32655680 32656069 . + 2 Parent=GSCOCT00038194001 | |
| 75031 chr11 manual_curation CDS 32656280 32656673 . + 2 Parent=GSCOCT00038194001 | |
| 75032 chr11 manual_curation CDS 32656836 32656941 . + 0 Parent=GSCOCT00038194001 | |
| 75033 chr11 manual_curation CDS 32657037 32657128 . + 1 Parent=GSCOCT00038194001 | |
| 75034 chr11 manual_curation CDS 32657213 32657281 . + 0 Parent=GSCOCT00038194001 | |
| 75035 chr11 manual_curation CDS 32657388 32657486 . + 0 Parent=GSCOCT00038194001 | |
| 75036 chr11 manual_curation gene 32658653 32662260 . + . ID=GSCOCG00038195001;Name=Cc11_g16550 | |
| 75037 chr11 manual_curation mRNA 32658653 32662260 . + . ID=GSCOCT00038195001;Parent=GSCOCG00038195001;Name=Cc11_g16550 | |
| 75038 chr11 manual_curation polypeptide 32658653 32662260 . + . ID=GSCOCP00038195001;Dbxref=InterPro:IPR013057,PFAM:PF01490,SwissProt:Q9C733,SwissProt:Q9FKS8,SwissProt:Q9LRB5,TAIR:AT1G24400.1,TAIR:AT1G48640.1,TAIR:AT5G40780.1,TrEMBL:B9HLA1,TrEMBL:C5YMJ8,TrEMBL:D7MJ37;Derives_from=GSCOCT00038195001;Name=Cc11_g16550;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Lysine histidine transporter 1,CC_functional_completeness:complete,CC_gene:LHT1,CC_gene:LHT2,CC_gene:At1g48640;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038195001~ Lysine histidine transporter 1~ LHT1~ complete;original_location=join(933347..933528%2C934796..935185%2C935478..935871%2C936053..936158%2C936402..936493%2C936652..936720%2C936856..936954);owner=coffea | |
| 75039 chr11 manual_curation exon 32658653 32658834 . + . Parent=GSCOCT00038195001 | |
| 75040 chr11 manual_curation exon 32660102 32660491 . + . Parent=GSCOCT00038195001 | |
| 75041 chr11 manual_curation exon 32660784 32661177 . + . Parent=GSCOCT00038195001 | |
| 75042 chr11 manual_curation exon 32661359 32661464 . + . Parent=GSCOCT00038195001 | |
| 75043 chr11 manual_curation exon 32661708 32661799 . + . Parent=GSCOCT00038195001 | |
| 75044 chr11 manual_curation exon 32661958 32662026 . + . Parent=GSCOCT00038195001 | |
| 75045 chr11 manual_curation exon 32662162 32662260 . + . Parent=GSCOCT00038195001 | |
| 75046 chr11 manual_curation CDS 32658653 32658834 . + 0 Parent=GSCOCT00038195001 | |
| 75047 chr11 manual_curation CDS 32660102 32660491 . + 2 Parent=GSCOCT00038195001 | |
| 75048 chr11 manual_curation CDS 32660784 32661177 . + 2 Parent=GSCOCT00038195001 | |
| 75049 chr11 manual_curation CDS 32661359 32661464 . + 0 Parent=GSCOCT00038195001 | |
| 75050 chr11 manual_curation CDS 32661708 32661799 . + 1 Parent=GSCOCT00038195001 | |
| 75051 chr11 manual_curation CDS 32661958 32662026 . + 0 Parent=GSCOCT00038195001 | |
| 75052 chr11 manual_curation CDS 32662162 32662260 . + 0 Parent=GSCOCT00038195001 | |
| 75053 chr11 manual_curation gene 32663687 32668797 . + . ID=GSCOCG00038196001;Name=Cc11_g16560 | |
| 75054 chr11 manual_curation mRNA 32663687 32668797 . + . ID=GSCOCT00038196001;Parent=GSCOCG00038196001;Name=Cc11_g16560 | |
| 75055 chr11 manual_curation polypeptide 32663687 32668378 . + . ID=GSCOCP00038196001;Dbxref=InterPro:IPR007185,InterPro:IPR013627,InterPro:IPR016722,PFAM:PF04042,PFAM:PF08418,PIR:PIRSF018300,SwissProt:O89043,SwissProt:P33611,SwissProt:Q14181,TAIR:AT1G67630.1,TrEMBL:B9RMM9,TrEMBL:D7TAP9,TrEMBL:G7JC29;Derives_from=GSCOCT00038196001;Name=Cc11_g16560;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0003887,GO:0006260,CC_EC_number:missing_EC_number,PRODUCT:DNA polymerase alpha 2,CC_functional_completeness:complete,CC_gene:Pola2,CC_gene:POLA2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038196001~ DNA polymerase alpha 2~ Pola2~ complete;original_location=join(938381..938456%2C938530..938605%2C938943..939068%2C939527..939893%2C939974..940069%2C940277..940356%2C940806..940881%2C940979..941155%2C941392..941496%2C941584..941679%2C941773..941865%2C941972..942010%2C942107..942148%2C942355..942430%2C942634..942731%2C942917..943072);owner=coffea | |
| 75056 chr11 manual_curation exon 32663687 32663762 . + . Parent=GSCOCT00038196001 | |
| 75057 chr11 manual_curation exon 32663836 32663911 . + . Parent=GSCOCT00038196001 | |
| 75058 chr11 manual_curation exon 32664249 32664374 . + . Parent=GSCOCT00038196001 | |
| 75059 chr11 manual_curation exon 32664833 32665199 . + . Parent=GSCOCT00038196001 | |
| 75060 chr11 manual_curation exon 32665280 32665375 . + . Parent=GSCOCT00038196001 | |
| 75061 chr11 manual_curation exon 32665583 32665662 . + . Parent=GSCOCT00038196001 | |
| 75062 chr11 manual_curation exon 32666112 32666187 . + . Parent=GSCOCT00038196001 | |
| 75063 chr11 manual_curation exon 32666285 32666461 . + . Parent=GSCOCT00038196001 | |
| 75064 chr11 manual_curation exon 32666698 32666802 . + . Parent=GSCOCT00038196001 | |
| 75065 chr11 manual_curation exon 32666890 32666985 . + . Parent=GSCOCT00038196001 | |
| 75066 chr11 manual_curation exon 32667079 32667171 . + . Parent=GSCOCT00038196001 | |
| 75067 chr11 manual_curation exon 32667278 32667316 . + . Parent=GSCOCT00038196001 | |
| 75068 chr11 manual_curation exon 32667413 32667454 . + . Parent=GSCOCT00038196001 | |
| 75069 chr11 manual_curation exon 32667661 32667736 . + . Parent=GSCOCT00038196001 | |
| 75070 chr11 manual_curation exon 32667940 32668037 . + . Parent=GSCOCT00038196001 | |
| 75071 chr11 manual_curation exon 32668223 32668797 . + . Parent=GSCOCT00038196001 | |
| 75072 chr11 manual_curation CDS 32663687 32663762 . + 0 Parent=GSCOCT00038196001 | |
| 75073 chr11 manual_curation CDS 32663836 32663911 . + 1 Parent=GSCOCT00038196001 | |
| 75074 chr11 manual_curation CDS 32664249 32664374 . + 2 Parent=GSCOCT00038196001 | |
| 75075 chr11 manual_curation CDS 32664833 32665199 . + 2 Parent=GSCOCT00038196001 | |
| 75076 chr11 manual_curation CDS 32665280 32665375 . + 0 Parent=GSCOCT00038196001 | |
| 75077 chr11 manual_curation CDS 32665583 32665662 . + 0 Parent=GSCOCT00038196001 | |
| 75078 chr11 manual_curation CDS 32666112 32666187 . + 2 Parent=GSCOCT00038196001 | |
| 75079 chr11 manual_curation CDS 32666285 32666461 . + 0 Parent=GSCOCT00038196001 | |
| 75080 chr11 manual_curation CDS 32666698 32666802 . + 0 Parent=GSCOCT00038196001 | |
| 75081 chr11 manual_curation CDS 32666890 32666985 . + 0 Parent=GSCOCT00038196001 | |
| 75082 chr11 manual_curation CDS 32667079 32667171 . + 0 Parent=GSCOCT00038196001 | |
| 75083 chr11 manual_curation CDS 32667278 32667316 . + 0 Parent=GSCOCT00038196001 | |
| 75084 chr11 manual_curation CDS 32667413 32667454 . + 0 Parent=GSCOCT00038196001 | |
| 75085 chr11 manual_curation CDS 32667661 32667736 . + 0 Parent=GSCOCT00038196001 | |
| 75086 chr11 manual_curation CDS 32667940 32668037 . + 1 Parent=GSCOCT00038196001 | |
| 75087 chr11 manual_curation CDS 32668223 32668378 . + 0 Parent=GSCOCT00038196001 | |
| 75088 chr11 manual_curation gene 32669686 32670447 . - . ID=GSCOCG00038197001;Name=Cc11_g16570 | |
| 75089 chr11 manual_curation mRNA 32669686 32670447 . - . ID=GSCOCT00038197001;Parent=GSCOCG00038197001;Name=Cc11_g16570 | |
| 75090 chr11 manual_curation polypeptide 32669686 32670447 . - . ID=GSCOCP00038197001;Dbxref=InterPro:IPR006634,PFAM:PF03798,PROFILE:PS50922,SMART:SM00724,TAIR:AT3G25950.1,TAIR:AT3G27270.1,TAIR:AT5G14280.1,TrEMBL:B9GJB8,TrEMBL:B9RMM8,TrEMBL:D7UBG3;Derives_from=GSCOCT00038197001;Name=Cc11_g16570;Ontology_term=CC_evidence_code:ISS,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:DNA-binding storekeeper protein-related,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038197001~ DNA-binding storekeeper protein-related~ unknown_gene~ fragment;original_location=complement(944380..945141);owner=coffea | |
| 75091 chr11 manual_curation exon 32669686 32670447 . - . Parent=GSCOCT00038197001 | |
| 75092 chr11 manual_curation CDS 32669686 32670447 . - 0 Parent=GSCOCT00038197001 | |
| 75093 chr11 manual_curation gene 32673757 32679437 . - . ID=GSCOCG00038198001;Name=Cc11_g16580 | |
| 75094 chr11 manual_curation mRNA 32673757 32679437 . - . ID=GSCOCT00038198001;Parent=GSCOCG00038198001;Name=Cc11_g16580 | |
| 75095 chr11 manual_curation polypeptide 32674124 32679144 . - . ID=GSCOCP00038198001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR002198,InterPro:IPR002347,InterPro:IPR011284,InterPro:IPR016040,InterPro:IPR020842,InterPro:IPR020904,PANTHER:PTHR19410,PFAM:PF00106,PRINTS:PR00080,PRINTS:PR00081,PROSITE:PS00061,SMART:SM00822,SwissProt:P28643,SwissProt:Q93X62,SwissProt:Q949M3,TAIR:AT1G24360.1,TAIR:AT2G29260.1,TAIR:AT5G06060.1,TIGRFAMs:TIGR01830,TrEMBL:B9HTB3,TrEMBL:D7TAP7,TrEMBL:I1LNB1;Derives_from=GSCOCT00038198001;Name=Cc11_g16580;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004316,GO:0005488,GO:0006633,GO:0008152,GO:0016491,GO:0051287,GO:0055114,CC_EC_number:1.1.1.100,CC_EC_number:1.1.1.100,PRODUCT:3-oxoacyl-[acyl-carrier-protein] reductase%2C chloroplastic,CC_functional_completeness:complete,CC_gene:CLKR27,CC_gene:gbkr1,CC_gene:bkr3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038198001~ 3-oxoacyl-[acyl-carrier-protein] reductase%2C chloroplastic~ CLKR27~ complete;original_location=complement(join(953673..953838%2C952558..952700%2C951818..951871%2C950955..951035%2C950824..950869%2C950650..950744%2C950536..950568%2C950011..950145%2C949838..949931%2C949112..949194%2C948818..948850));owner=coffea | |
| 75096 chr11 manual_curation exon 32673757 32674156 . - . Parent=GSCOCT00038198001 | |
| 75097 chr11 manual_curation exon 32674418 32674500 . - . Parent=GSCOCT00038198001 | |
| 75098 chr11 manual_curation exon 32675144 32675237 . - . Parent=GSCOCT00038198001 | |
| 75099 chr11 manual_curation exon 32675317 32675451 . - . Parent=GSCOCT00038198001 | |
| 75100 chr11 manual_curation exon 32675842 32675874 . - . Parent=GSCOCT00038198001 | |
| 75101 chr11 manual_curation exon 32675956 32676050 . - . Parent=GSCOCT00038198001 | |
| 75102 chr11 manual_curation exon 32676130 32676175 . - . Parent=GSCOCT00038198001 | |
| 75103 chr11 manual_curation exon 32676261 32676341 . - . Parent=GSCOCT00038198001 | |
| 75104 chr11 manual_curation exon 32677124 32677177 . - . Parent=GSCOCT00038198001 | |
| 75105 chr11 manual_curation exon 32677864 32678006 . - . Parent=GSCOCT00038198001 | |
| 75106 chr11 manual_curation exon 32678979 32679437 . - . Parent=GSCOCT00038198001 | |
| 75107 chr11 manual_curation CDS 32674124 32674156 . - 0 Parent=GSCOCT00038198001 | |
| 75108 chr11 manual_curation CDS 32674418 32674500 . - 1 Parent=GSCOCT00038198001 | |
| 75109 chr11 manual_curation CDS 32675144 32675237 . - 0 Parent=GSCOCT00038198001 | |
| 75110 chr11 manual_curation CDS 32675317 32675451 . - 0 Parent=GSCOCT00038198001 | |
| 75111 chr11 manual_curation CDS 32675842 32675874 . - 0 Parent=GSCOCT00038198001 | |
| 75112 chr11 manual_curation CDS 32675956 32676050 . - 1 Parent=GSCOCT00038198001 | |
| 75113 chr11 manual_curation CDS 32676130 32676175 . - 0 Parent=GSCOCT00038198001 | |
| 75114 chr11 manual_curation CDS 32676261 32676341 . - 0 Parent=GSCOCT00038198001 | |
| 75115 chr11 manual_curation CDS 32677124 32677177 . - 0 Parent=GSCOCT00038198001 | |
| 75116 chr11 manual_curation CDS 32677864 32678006 . - 1 Parent=GSCOCT00038198001 | |
| 75117 chr11 manual_curation CDS 32678979 32679144 . - 0 Parent=GSCOCT00038198001 | |
| 75118 chr11 manual_curation gene 32679703 32682533 . - . ID=GSCOCG00038199001;Name=Cc11_g16590 | |
| 75119 chr11 manual_curation mRNA 32679703 32682533 . - . ID=GSCOCT00038199001;Parent=GSCOCG00038199001;Name=Cc11_g16590 | |
| 75120 chr11 manual_curation polypeptide 32680172 32682213 . - . ID=GSCOCP00038199001;Dbxref=InterPro:IPR004394,PANTHER:PTHR21043,PFAM:PF02410,TAIR:AT1G67620.1,TrEMBL:B9HIN9,TrEMBL:C6T2E4,TrEMBL:D7TAP2;Derives_from=GSCOCT00038199001;Name=Cc11_g16590;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Lojap-related protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038199001~ Putative Lojap-related protein~ unknown_gene~ fragment;original_location=complement(join(956821..956907%2C956486..956573%2C955096..955193%2C954866..954937));owner=coffea | |
| 75121 chr11 manual_curation exon 32679703 32680243 . - . Parent=GSCOCT00038199001 | |
| 75122 chr11 manual_curation exon 32680402 32680499 . - . Parent=GSCOCT00038199001 | |
| 75123 chr11 manual_curation exon 32681792 32681879 . - . Parent=GSCOCT00038199001 | |
| 75124 chr11 manual_curation exon 32682127 32682533 . - . Parent=GSCOCT00038199001 | |
| 75125 chr11 manual_curation CDS 32680172 32680243 . - 0 Parent=GSCOCT00038199001 | |
| 75126 chr11 manual_curation CDS 32680402 32680499 . - 1 Parent=GSCOCT00038199001 | |
| 75127 chr11 manual_curation CDS 32681792 32681879 . - 0 Parent=GSCOCT00038199001 | |
| 75128 chr11 manual_curation CDS 32682127 32682213 . - 0 Parent=GSCOCT00038199001 | |
| 75129 chr11 manual_curation gene 32684973 32692927 . + . ID=GSCOCG00038200001;Name=Cc11_g16600 | |
| 75130 chr11 manual_curation mRNA 32684973 32692927 . + . ID=GSCOCT00038200001;Parent=GSCOCG00038200001;Name=Cc11_g16600 | |
| 75131 chr11 manual_curation polypeptide 32685877 32692455 . + . ID=GSCOCP00038200001;Dbxref=TAIR:AT1G27850.1,TAIR:AT2G40070.1,TAIR:AT3G09000.1,TrEMBL:A5C8L0,TrEMBL:B9RMM4,TrEMBL:D7TAP1;Derives_from=GSCOCT00038200001;Name=Cc11_g16600;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B FUNCTIONS IN,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038200001~ Putative unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40070.1)%3B Has 9215 Blast hits to 5316 proteins in 473 species: Archae - 6%3B Bacteria - 773%3B Metazoa - 3392%3B Fungi - 1710%3B Plants - 539%3B Viruses - 143%3B Other Eukaryotes - 2652 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(960571..960766%2C960904..961012%2C961318..961438%2C961542..962279%2C963257..965114%2C966722..967149);owner=coffea | |
| 75132 chr11 manual_curation exon 32684973 32686072 . + . Parent=GSCOCT00038200001 | |
| 75133 chr11 manual_curation exon 32686210 32686318 . + . Parent=GSCOCT00038200001 | |
| 75134 chr11 manual_curation exon 32686624 32686744 . + . Parent=GSCOCT00038200001 | |
| 75135 chr11 manual_curation exon 32686848 32687585 . + . Parent=GSCOCT00038200001 | |
| 75136 chr11 manual_curation exon 32688563 32690420 . + . Parent=GSCOCT00038200001 | |
| 75137 chr11 manual_curation exon 32692028 32692927 . + . Parent=GSCOCT00038200001 | |
| 75138 chr11 manual_curation CDS 32685877 32686072 . + 0 Parent=GSCOCT00038200001 | |
| 75139 chr11 manual_curation CDS 32686210 32686318 . + 1 Parent=GSCOCT00038200001 | |
| 75140 chr11 manual_curation CDS 32686624 32686744 . + 2 Parent=GSCOCT00038200001 | |
| 75141 chr11 manual_curation CDS 32686848 32687585 . + 0 Parent=GSCOCT00038200001 | |
| 75142 chr11 manual_curation CDS 32688563 32690420 . + 0 Parent=GSCOCT00038200001 | |
| 75143 chr11 manual_curation CDS 32692028 32692455 . + 1 Parent=GSCOCT00038200001 | |
| 75144 chr11 manual_curation gene 32693461 32701471 . + . ID=GSCOCG00038201001;Name=Cc11_g16610 | |
| 75145 chr11 manual_curation mRNA 32693461 32701471 . + . ID=GSCOCT00038201001;Parent=GSCOCG00038201001;Name=Cc11_g16610 | |
| 75146 chr11 manual_curation polypeptide 32693461 32701006 . + . ID=GSCOCP00038201001;Dbxref=InterPro:IPR001650,InterPro:IPR002464,InterPro:IPR004589,InterPro:IPR011545,InterPro:IPR014001,InterPro:IPR014021,InterPro:IPR018329,PANTHER:PTHR13710,PFAM:PF00270,PFAM:PF00271,PROFILE:PS51192,PROFILE:PS51194,PROSITE:PS00690,SMART:SM00487,SMART:SM00490,SwissProt:O94761,SwissProt:Q0WVW7,SwissProt:Q75NR7,TAIR:AT1G10930.1,TAIR:AT1G27880.1,TAIR:AT4G35740.1,TIGRFAMs:TIGR00614,TrEMBL:B9HTB0,TrEMBL:B9RMM3,TrEMBL:D7TAN9;Derives_from=GSCOCT00038201001;Name=Cc11_g16610;Ontology_term=CC_evidence_code:ISS,GO:0003676,GO:0004386,GO:0005524,GO:0006310,GO:0008026,CC_EC_number:missing_EC_number,PRODUCT:ATP-dependent DNA helicase Q-like 5,CC_functional_completeness:complete,CC_gene:RECQL5,CC_gene:Recql4,CC_gene:RECQL4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038201001~ ATP-dependent DNA helicase Q-like 5~ RECQL5~ complete;original_location=join(968155..968651%2C968805..969351%2C969440..969493%2C969732..969844%2C969967..970161%2C970277..970355%2C970462..970515%2C970628..970702%2C970810..970863%2C971339..971383%2C971499..971593%2C971669..971795%2C972339..972437%2C972528..972583%2C972666..972768%2C973429..973557%2C974226..974392%2C974799..974823%2C974912..975027%2C975613..975700);owner=coffea | |
| 75147 chr11 manual_curation exon 32693461 32693957 . + . Parent=GSCOCT00038201001 | |
| 75148 chr11 manual_curation exon 32694111 32694657 . + . Parent=GSCOCT00038201001 | |
| 75149 chr11 manual_curation exon 32694746 32694799 . + . Parent=GSCOCT00038201001 | |
| 75150 chr11 manual_curation exon 32695038 32695150 . + . Parent=GSCOCT00038201001 | |
| 75151 chr11 manual_curation exon 32695273 32695467 . + . Parent=GSCOCT00038201001 | |
| 75152 chr11 manual_curation exon 32695583 32695661 . + . Parent=GSCOCT00038201001 | |
| 75153 chr11 manual_curation exon 32695768 32695821 . + . Parent=GSCOCT00038201001 | |
| 75154 chr11 manual_curation exon 32695934 32696008 . + . Parent=GSCOCT00038201001 | |
| 75155 chr11 manual_curation exon 32696116 32696169 . + . Parent=GSCOCT00038201001 | |
| 75156 chr11 manual_curation exon 32696645 32696689 . + . Parent=GSCOCT00038201001 | |
| 75157 chr11 manual_curation exon 32696805 32696899 . + . Parent=GSCOCT00038201001 | |
| 75158 chr11 manual_curation exon 32696975 32697101 . + . Parent=GSCOCT00038201001 | |
| 75159 chr11 manual_curation exon 32697645 32697743 . + . Parent=GSCOCT00038201001 | |
| 75160 chr11 manual_curation exon 32697834 32697889 . + . Parent=GSCOCT00038201001 | |
| 75161 chr11 manual_curation exon 32697972 32698074 . + . Parent=GSCOCT00038201001 | |
| 75162 chr11 manual_curation exon 32698735 32698863 . + . Parent=GSCOCT00038201001 | |
| 75163 chr11 manual_curation exon 32699532 32699698 . + . Parent=GSCOCT00038201001 | |
| 75164 chr11 manual_curation exon 32700105 32700129 . + . Parent=GSCOCT00038201001 | |
| 75165 chr11 manual_curation exon 32700218 32700333 . + . Parent=GSCOCT00038201001 | |
| 75166 chr11 manual_curation exon 32700919 32701471 . + . Parent=GSCOCT00038201001 | |
| 75167 chr11 manual_curation CDS 32693461 32693957 . + 0 Parent=GSCOCT00038201001 | |
| 75168 chr11 manual_curation CDS 32694111 32694657 . + 2 Parent=GSCOCT00038201001 | |
| 75169 chr11 manual_curation CDS 32694746 32694799 . + 0 Parent=GSCOCT00038201001 | |
| 75170 chr11 manual_curation CDS 32695038 32695150 . + 0 Parent=GSCOCT00038201001 | |
| 75171 chr11 manual_curation CDS 32695273 32695467 . + 2 Parent=GSCOCT00038201001 | |
| 75172 chr11 manual_curation CDS 32695583 32695661 . + 2 Parent=GSCOCT00038201001 | |
| 75173 chr11 manual_curation CDS 32695768 32695821 . + 0 Parent=GSCOCT00038201001 | |
| 75174 chr11 manual_curation CDS 32695934 32696008 . + 0 Parent=GSCOCT00038201001 | |
| 75175 chr11 manual_curation CDS 32696116 32696169 . + 0 Parent=GSCOCT00038201001 | |
| 75176 chr11 manual_curation CDS 32696645 32696689 . + 0 Parent=GSCOCT00038201001 | |
| 75177 chr11 manual_curation CDS 32696805 32696899 . + 0 Parent=GSCOCT00038201001 | |
| 75178 chr11 manual_curation CDS 32696975 32697101 . + 2 Parent=GSCOCT00038201001 | |
| 75179 chr11 manual_curation CDS 32697645 32697743 . + 0 Parent=GSCOCT00038201001 | |
| 75180 chr11 manual_curation CDS 32697834 32697889 . + 0 Parent=GSCOCT00038201001 | |
| 75181 chr11 manual_curation CDS 32697972 32698074 . + 2 Parent=GSCOCT00038201001 | |
| 75182 chr11 manual_curation CDS 32698735 32698863 . + 0 Parent=GSCOCT00038201001 | |
| 75183 chr11 manual_curation CDS 32699532 32699698 . + 0 Parent=GSCOCT00038201001 | |
| 75184 chr11 manual_curation CDS 32700105 32700129 . + 2 Parent=GSCOCT00038201001 | |
| 75185 chr11 manual_curation CDS 32700218 32700333 . + 0 Parent=GSCOCT00038201001 | |
| 75186 chr11 manual_curation CDS 32700919 32701006 . + 2 Parent=GSCOCT00038201001 | |
| 75187 chr11 manual_curation gene 32704187 32707877 . + . ID=GSCOCG00038202001;Name=Cc11_g16620 | |
| 75188 chr11 manual_curation mRNA 32704187 32707877 . + . ID=GSCOCT00038202001;Parent=GSCOCG00038202001;Name=Cc11_g16620 | |
| 75189 chr11 manual_curation polypeptide 32704333 32707415 . + . ID=GSCOCP00038202001;Dbxref=InterPro:IPR003832,PFAM:PF02681,SwissProt:O32107,TAIR:AT1G24350.3,TAIR:AT1G67600.1,TAIR:AT3G21610.1,TrEMBL:B9HTA9,TrEMBL:B9RMM2,TrEMBL:Q9FXC5;Derives_from=GSCOCT00038202001;Name=Cc11_g16620;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized membrane protein yuiD,CC_functional_completeness:modules,CC_gene:yuiD;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038202001~ Putative Uncharacterized membrane protein yuiD~ yuiD~ modules;original_location=join(979027..979235%2C979836..979992%2C981036..981086%2C981214..981306%2C982032..982109);owner=coffea | |
| 75190 chr11 manual_curation exon 32704187 32704541 . + . Parent=GSCOCT00038202001 | |
| 75191 chr11 manual_curation exon 32705142 32705298 . + . Parent=GSCOCT00038202001 | |
| 75192 chr11 manual_curation exon 32706342 32706392 . + . Parent=GSCOCT00038202001 | |
| 75193 chr11 manual_curation exon 32706520 32706612 . + . Parent=GSCOCT00038202001 | |
| 75194 chr11 manual_curation exon 32707338 32707877 . + . Parent=GSCOCT00038202001 | |
| 75195 chr11 manual_curation CDS 32704333 32704541 . + 0 Parent=GSCOCT00038202001 | |
| 75196 chr11 manual_curation CDS 32705142 32705298 . + 2 Parent=GSCOCT00038202001 | |
| 75197 chr11 manual_curation CDS 32706342 32706392 . + 0 Parent=GSCOCT00038202001 | |
| 75198 chr11 manual_curation CDS 32706520 32706612 . + 0 Parent=GSCOCT00038202001 | |
| 75199 chr11 manual_curation CDS 32707338 32707415 . + 0 Parent=GSCOCT00038202001 | |
| 75200 chr11 manual_curation gene 32708037 32712749 . - . ID=GSCOCG00038203001;Name=Cc11_g16630 | |
| 75201 chr11 manual_curation mRNA 32708037 32712749 . - . ID=GSCOCT00038203001;Parent=GSCOCG00038203001;Name=Cc11_g16630 | |
| 75202 chr11 manual_curation polypeptide 32708244 32712509 . - . ID=GSCOCP00038203001;Dbxref=InterPro:IPR002938,InterPro:IPR003042,PFAM:PF01494,PRINTS:PR00420,SwissProt:P42534,SwissProt:Q05355,SwissProt:Q8KN28,TAIR:AT1G24340.1,TrEMBL:B9HL95,TrEMBL:B9RMM1,TrEMBL:D7TAN7;Derives_from=GSCOCT00038203001;Name=Cc11_g16630;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0008152,GO:0016491,GO:0055114,CC_EC_number:1.14.13.20,PRODUCT:Putative 2%2C4-dichlorophenol 6-monooxygenase,CC_functional_completeness:complete,CC_gene:tfdB,CC_gene:SCO5321,CC_gene:schC;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038203001~ Putative 2%2C4-dichlorophenol 6-monooxygenase~ tfdB~ complete;original_location=complement(join(986999..987203%2C986794..986876%2C986544..986679%2C985780..986273%2C985607..985654%2C985194..985368%2C984940..985052%2C984746..984842%2C984427..984646%2C983601..983754%2C982938..983351));owner=coffea | |
| 75203 chr11 manual_curation exon 32708037 32708657 . - . Parent=GSCOCT00038203001 | |
| 75204 chr11 manual_curation exon 32708907 32709060 . - . Parent=GSCOCT00038203001 | |
| 75205 chr11 manual_curation exon 32709733 32709952 . - . Parent=GSCOCT00038203001 | |
| 75206 chr11 manual_curation exon 32710052 32710148 . - . Parent=GSCOCT00038203001 | |
| 75207 chr11 manual_curation exon 32710246 32710358 . - . Parent=GSCOCT00038203001 | |
| 75208 chr11 manual_curation exon 32710500 32710674 . - . Parent=GSCOCT00038203001 | |
| 75209 chr11 manual_curation exon 32710913 32710960 . - . Parent=GSCOCT00038203001 | |
| 75210 chr11 manual_curation exon 32711086 32711579 . - . Parent=GSCOCT00038203001 | |
| 75211 chr11 manual_curation exon 32711850 32711985 . - . Parent=GSCOCT00038203001 | |
| 75212 chr11 manual_curation exon 32712100 32712182 . - . Parent=GSCOCT00038203001 | |
| 75213 chr11 manual_curation exon 32712305 32712749 . - . Parent=GSCOCT00038203001 | |
| 75214 chr11 manual_curation CDS 32708244 32708657 . - 0 Parent=GSCOCT00038203001 | |
| 75215 chr11 manual_curation CDS 32708907 32709060 . - 2 Parent=GSCOCT00038203001 | |
| 75216 chr11 manual_curation CDS 32709733 32709952 . - 1 Parent=GSCOCT00038203001 | |
| 75217 chr11 manual_curation CDS 32710052 32710148 . - 0 Parent=GSCOCT00038203001 | |
| 75218 chr11 manual_curation CDS 32710246 32710358 . - 1 Parent=GSCOCT00038203001 | |
| 75219 chr11 manual_curation CDS 32710500 32710674 . - 0 Parent=GSCOCT00038203001 | |
| 75220 chr11 manual_curation CDS 32710913 32710960 . - 0 Parent=GSCOCT00038203001 | |
| 75221 chr11 manual_curation CDS 32711086 32711579 . - 1 Parent=GSCOCT00038203001 | |
| 75222 chr11 manual_curation CDS 32711850 32711985 . - 0 Parent=GSCOCT00038203001 | |
| 75223 chr11 manual_curation CDS 32712100 32712182 . - 1 Parent=GSCOCT00038203001 | |
| 75224 chr11 manual_curation CDS 32712305 32712509 . - 0 Parent=GSCOCT00038203001 | |
| 75225 chr11 manual_curation gene 32714442 32717077 . + . ID=GSCOCG00038205001;Name=Cc11_g16640 | |
| 75226 chr11 manual_curation mRNA 32714442 32717077 . + . ID=GSCOCT00038205001;Parent=GSCOCG00038205001;Name=Cc11_g16640 | |
| 75227 chr11 manual_curation polypeptide 32715567 32716780 . + . ID=GSCOCP00038205001;Dbxref=InterPro:IPR005516,PFAM:PF03763,TAIR:AT1G30320.1,TAIR:AT1G67590.1,TAIR:AT2G02170.1,TrEMBL:B9HL94,TrEMBL:B9HTA7,TrEMBL:B9RMM0;Derives_from=GSCOCT00038205001;Name=Cc11_g16640;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Remorin family protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038205001~ Remorin family protein~ unknown_gene~ fragment;original_location=join(990261..990379%2C990449..990622%2C990722..990803%2C991265..991474);owner=coffea | |
| 75228 chr11 manual_curation exon 32714442 32715685 . + . Parent=GSCOCT00038205001 | |
| 75229 chr11 manual_curation exon 32715755 32715928 . + . Parent=GSCOCT00038205001 | |
| 75230 chr11 manual_curation exon 32716028 32716109 . + . Parent=GSCOCT00038205001 | |
| 75231 chr11 manual_curation exon 32716571 32717077 . + . Parent=GSCOCT00038205001 | |
| 75232 chr11 manual_curation CDS 32715567 32715685 . + 0 Parent=GSCOCT00038205001 | |
| 75233 chr11 manual_curation CDS 32715755 32715928 . + 2 Parent=GSCOCT00038205001 | |
| 75234 chr11 manual_curation CDS 32716028 32716109 . + 2 Parent=GSCOCT00038205001 | |
| 75235 chr11 manual_curation CDS 32716571 32716780 . + 0 Parent=GSCOCT00038205001 | |
| 75236 chr11 manual_curation gene 32719221 32722229 . + . ID=GSCOCG00038207001;Name=Cc11_g16650 | |
| 75237 chr11 manual_curation mRNA 32719221 32722229 . + . ID=GSCOCT00038207001;Parent=GSCOCG00038207001;Name=Cc11_g16650 | |
| 75238 chr11 manual_curation polypeptide 32720042 32721864 . + . ID=GSCOCP00038207001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:A2XUW1,SwissProt:Q6K5F8,SwissProt:Q7XUF4,TAIR:AT1G18040.1,TAIR:AT1G67580.1,TAIR:AT5G63370.1,TrEMBL:B9RML9,TrEMBL:F6HG49,TrEMBL:I1KRZ8;Derives_from=GSCOCT00038207001;Name=Cc11_g16650;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.23,PRODUCT:Cyclin-dependent kinase G-2,CC_functional_completeness:fragment,CC_gene:CDKG-2,CC_gene:CDKG-1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038207001~ Cyclin-dependent kinase G-2~ CDKG-2~ fragment;original_location=join(994736..995001%2C995538..995673%2C995784..995872%2C995958..996032%2C996065..996176%2C996271..996377%2C996459..996558);owner=coffea | |
| 75239 chr11 manual_curation exon 32719221 32720307 . + . Parent=GSCOCT00038207001 | |
| 75240 chr11 manual_curation exon 32720844 32720979 . + . Parent=GSCOCT00038207001 | |
| 75241 chr11 manual_curation exon 32721090 32721178 . + . Parent=GSCOCT00038207001 | |
| 75242 chr11 manual_curation exon 32721264 32721338 . + . Parent=GSCOCT00038207001 | |
| 75243 chr11 manual_curation exon 32721371 32721482 . + . Parent=GSCOCT00038207001 | |
| 75244 chr11 manual_curation exon 32721577 32721683 . + . Parent=GSCOCT00038207001 | |
| 75245 chr11 manual_curation exon 32721765 32722229 . + . Parent=GSCOCT00038207001 | |
| 75246 chr11 manual_curation CDS 32720042 32720307 . + 0 Parent=GSCOCT00038207001 | |
| 75247 chr11 manual_curation CDS 32720844 32720979 . + 2 Parent=GSCOCT00038207001 | |
| 75248 chr11 manual_curation CDS 32721090 32721178 . + 0 Parent=GSCOCT00038207001 | |
| 75249 chr11 manual_curation CDS 32721264 32721338 . + 2 Parent=GSCOCT00038207001 | |
| 75250 chr11 manual_curation CDS 32721371 32721482 . + 2 Parent=GSCOCT00038207001 | |
| 75251 chr11 manual_curation CDS 32721577 32721683 . + 0 Parent=GSCOCT00038207001 | |
| 75252 chr11 manual_curation CDS 32721765 32721864 . + 2 Parent=GSCOCT00038207001 | |
| 75253 chr11 manual_curation gene 32725972 32730009 . - . ID=GSCOCG00038209001;Name=Cc11_g16660 | |
| 75254 chr11 manual_curation mRNA 32725972 32730009 . - . ID=GSCOCT00038209001;Parent=GSCOCG00038209001;Name=Cc11_g16660 | |
| 75255 chr11 manual_curation polypeptide 32726204 32729858 . - . ID=GSCOCP00038209001;Dbxref=InterPro:IPR021924,PFAM:PF12056,TAIR:AT1G50630.1,TAIR:AT1G67570.1,TAIR:AT3G20300.1,TrEMBL:B9HL92,TrEMBL:D7TAN3,TrEMBL:I1K3K2;Derives_from=GSCOCT00038209001;Name=Cc11_g16660;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF3537),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038209001~ Protein of unknown function (DUF3537)~ unknown_gene~ complete;original_location=complement(join(1004061..1004552%2C1002932..1003363%2C1002223..1002529%2C1000898..1001040));owner=coffea | |
| 75256 chr11 manual_curation exon 32725972 32726346 . - . Parent=GSCOCT00038209001 | |
| 75257 chr11 manual_curation exon 32727529 32727835 . - . Parent=GSCOCT00038209001 | |
| 75258 chr11 manual_curation exon 32728238 32728669 . - . Parent=GSCOCT00038209001 | |
| 75259 chr11 manual_curation exon 32729367 32730009 . - . Parent=GSCOCT00038209001 | |
| 75260 chr11 manual_curation CDS 32726204 32726346 . - 1 Parent=GSCOCT00038209001 | |
| 75261 chr11 manual_curation CDS 32727529 32727835 . - 0 Parent=GSCOCT00038209001 | |
| 75262 chr11 manual_curation CDS 32728238 32728669 . - 0 Parent=GSCOCT00038209001 | |
| 75263 chr11 manual_curation CDS 32729367 32729858 . - 0 Parent=GSCOCT00038209001 | |
| 75264 chr11 manual_curation gene 32732283 32734012 . + . ID=GSCOCG00038210001;Name=Cc11_g16670 | |
| 75265 chr11 manual_curation mRNA 32732283 32734012 . + . ID=GSCOCT00038210001;Parent=GSCOCG00038210001;Name=Cc11_g16670 | |
| 75266 chr11 manual_curation polypeptide 32732283 32734012 . + . ID=GSCOCP00038210001;Dbxref=InterPro:IPR000873,PFAM:PF00501,SwissProt:P0C5B6,SwissProt:Q7F1X5,SwissProt:Q84P23,TAIR:AT1G20500.1,TAIR:AT1G20510.1,TAIR:AT5G63380.1,TrEMBL:B9I3N0,TrEMBL:B9RMJ5,TrEMBL:D7TAQ2;Derives_from=GSCOCT00038210001;Name=Cc11_g16670;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,CC_EC_number:1.13.12.7,PRODUCT:Putative 4-coumarate--CoA ligase-like 5,CC_functional_completeness:fragment,CC_gene:4CLL5,CC_gene:4CLL9,CC_gene:4CLL4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038210001~ Putative 4-coumarate--CoA ligase-like 5~ 4CLL5~ fragment;original_location=join(1006977..1007000%2C1007084..1007300%2C1007474..1007675%2C1007804..1007812%2C1007938..1007965%2C1008109..1008184%2C1008269..1008407%2C1008553..1008706);owner=coffea | |
| 75267 chr11 manual_curation exon 32732283 32732306 . + . Parent=GSCOCT00038210001 | |
| 75268 chr11 manual_curation exon 32732390 32732606 . + . Parent=GSCOCT00038210001 | |
| 75269 chr11 manual_curation exon 32732780 32732981 . + . Parent=GSCOCT00038210001 | |
| 75270 chr11 manual_curation exon 32733110 32733118 . + . Parent=GSCOCT00038210001 | |
| 75271 chr11 manual_curation exon 32733244 32733271 . + . Parent=GSCOCT00038210001 | |
| 75272 chr11 manual_curation exon 32733415 32733490 . + . Parent=GSCOCT00038210001 | |
| 75273 chr11 manual_curation exon 32733575 32733713 . + . Parent=GSCOCT00038210001 | |
| 75274 chr11 manual_curation exon 32733859 32734012 . + . Parent=GSCOCT00038210001 | |
| 75275 chr11 manual_curation CDS 32732283 32732306 . + 0 Parent=GSCOCT00038210001 | |
| 75276 chr11 manual_curation CDS 32732390 32732606 . + 0 Parent=GSCOCT00038210001 | |
| 75277 chr11 manual_curation CDS 32732780 32732981 . + 1 Parent=GSCOCT00038210001 | |
| 75278 chr11 manual_curation CDS 32733110 32733118 . + 2 Parent=GSCOCT00038210001 | |
| 75279 chr11 manual_curation CDS 32733244 32733271 . + 2 Parent=GSCOCT00038210001 | |
| 75280 chr11 manual_curation CDS 32733415 32733490 . + 0 Parent=GSCOCT00038210001 | |
| 75281 chr11 manual_curation CDS 32733575 32733713 . + 1 Parent=GSCOCT00038210001 | |
| 75282 chr11 manual_curation CDS 32733859 32734012 . + 2 Parent=GSCOCT00038210001 | |
| 75283 chr11 manual_curation gene 32734546 32738830 . - . ID=GSCOCG00038212001;Name=Cc11_g16680 | |
| 75284 chr11 manual_curation mRNA 32734546 32738830 . - . ID=GSCOCT00038212001;Parent=GSCOCG00038212001;Name=Cc11_g16680 | |
| 75285 chr11 manual_curation polypeptide 32734546 32738830 . - . ID=GSCOCP00038212001;Dbxref=GENE3D:G3DSA:2.60.60.20,InterPro:IPR000907,InterPro:IPR001024,InterPro:IPR001246,InterPro:IPR008976,InterPro:IPR013819,InterPro:IPR020833,InterPro:IPR020834,PANTHER:PTHR11771,PFAM:PF00305,PFAM:PF01477,PRINTS:PR00087,PRINTS:PR00468,PROFILE:PS50095,PROFILE:PS51393,PROSITE:PS00081,PROSITE:PS00711,SMART:SM00308,SUPERFAMILY:SSF48484,SUPERFAMILY:SSF49723,SwissProt:O24371,SwissProt:Q9CAG3,SwissProt:Q9FNX8,TAIR:AT1G17420.1,TAIR:AT1G67560.1,TAIR:AT1G72520.1,TrEMBL:B9RMJ4,TrEMBL:D7TAQ3,TrEMBL:I1KS01;Derives_from=GSCOCT00038212001;Name=Cc11_g16680;Ontology_term=CC_evidence_code:ISS,GO:0005506,GO:0016165,GO:0046872,GO:0055114,CC_EC_number:1.13.11.12,PRODUCT:Lipoxygenase 6%2C choloroplastic,CC_functional_completeness:complete,CC_gene:LOX6,CC_gene:LOX3.1,CC_gene:LOX4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038212001~ Lipoxygenase 6%2C choloroplastic~ LOX6~ complete;original_location=complement(join(1013074..1013524%2C1012309..1012583%2C1011987..1012224%2C1011563..1011895%2C1011293..1011378%2C1011105..1011212%2C1010710..1011011%2C1010121..1010387%2C1009240..1009999));owner=coffea | |
| 75286 chr11 manual_curation exon 32734546 32735305 . - . Parent=GSCOCT00038212001 | |
| 75287 chr11 manual_curation exon 32735427 32735693 . - . Parent=GSCOCT00038212001 | |
| 75288 chr11 manual_curation exon 32736016 32736317 . - . Parent=GSCOCT00038212001 | |
| 75289 chr11 manual_curation exon 32736411 32736518 . - . Parent=GSCOCT00038212001 | |
| 75290 chr11 manual_curation exon 32736599 32736684 . - . Parent=GSCOCT00038212001 | |
| 75291 chr11 manual_curation exon 32736869 32737201 . - . Parent=GSCOCT00038212001 | |
| 75292 chr11 manual_curation exon 32737293 32737530 . - . Parent=GSCOCT00038212001 | |
| 75293 chr11 manual_curation exon 32737615 32737889 . - . Parent=GSCOCT00038212001 | |
| 75294 chr11 manual_curation exon 32738380 32738830 . - . Parent=GSCOCT00038212001 | |
| 75295 chr11 manual_curation CDS 32734546 32735305 . - 2 Parent=GSCOCT00038212001 | |
| 75296 chr11 manual_curation CDS 32735427 32735693 . - 2 Parent=GSCOCT00038212001 | |
| 75297 chr11 manual_curation CDS 32736016 32736317 . - 0 Parent=GSCOCT00038212001 | |
| 75298 chr11 manual_curation CDS 32736411 32736518 . - 0 Parent=GSCOCT00038212001 | |
| 75299 chr11 manual_curation CDS 32736599 32736684 . - 1 Parent=GSCOCT00038212001 | |
| 75300 chr11 manual_curation CDS 32736869 32737201 . - 1 Parent=GSCOCT00038212001 | |
| 75301 chr11 manual_curation CDS 32737293 32737530 . - 0 Parent=GSCOCT00038212001 | |
| 75302 chr11 manual_curation CDS 32737615 32737889 . - 1 Parent=GSCOCT00038212001 | |
| 75303 chr11 manual_curation CDS 32738380 32738830 . - 0 Parent=GSCOCT00038212001 | |
| 75304 chr11 manual_curation gene 32742753 32751094 . - . ID=GSCOCG00038213001;Name=Cc11_g16690 | |
| 75305 chr11 manual_curation mRNA 32742753 32751094 . - . ID=GSCOCT00038213001;Parent=GSCOCG00038213001;Name=Cc11_g16690 | |
| 75306 chr11 manual_curation polypeptide 32742753 32751094 . - . ID=GSCOCP00038213001;Dbxref=GENE3D:G3DSA:2.10.150.10,GENE3D:G3DSA:3.30.280.10,HAMAP:MF_01953,HAMAP:MF_01954,InterPro:IPR002019,InterPro:IPR002026,InterPro:IPR005848,InterPro:IPR006680,InterPro:IPR008221,InterPro:IPR011059,InterPro:IPR011612,InterPro:IPR017950,InterPro:IPR017951,PFAM:PF00449,PFAM:PF00547,PFAM:PF00699,PFAM:PF01979,PIR:PIRSF001222,PRINTS:PR01752,PRODOM:PD002319,PROFILE:PS51368,PROSITE:PS00145,PROSITE:PS01120,SUPERFAMILY:SSF51278,SUPERFAMILY:SSF51338,SUPERFAMILY:SSF54111,SwissProt:P07374,SwissProt:P0CS22,SwissProt:P0CS23,TAIR:AT1G67550.1,TIGRFAMs:TIGR00192,TIGRFAMs:TIGR00193,TIGRFAMs:TIGR01792,TrEMBL:A5B6F0,TrEMBL:D7TAQ4,TrEMBL:Q93WI8;Derives_from=GSCOCT00038213001;Name=Cc11_g16690;Ontology_term=CC_evidence_code:ISS,GO:0006807,GO:0009039,GO:0016151,GO:0016787,GO:0019627,CC_EC_number:3.5.1.5,CC_EC_number:3.5.1.5,PRODUCT:Urease,CC_functional_completeness:complete,CC_gene:URE1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038213001~ Urease~ URE1~ complete;original_location=complement(join(1025663..1025788%2C1025078..1025151%2C1024700..1024745%2C1024485..1024590%2C1023955..1024097%2C1023522..1023632%2C1022829..1022992%2C1022239..1022617%2C1022040..1022148%2C1020550..1020689%2C1020292..1020429%2C1020138..1020229%2C1019904..1020033%2C1019640..1019798%2C1018804..1018971%2C1018082..1018216%2C1017750..1017821%2C1017447..1017668));owner=coffea | |
| 75307 chr11 manual_curation exon 32742753 32742974 . - . Parent=GSCOCT00038213001 | |
| 75308 chr11 manual_curation exon 32743056 32743127 . - . Parent=GSCOCT00038213001 | |
| 75309 chr11 manual_curation exon 32743388 32743522 . - . Parent=GSCOCT00038213001 | |
| 75310 chr11 manual_curation exon 32744110 32744277 . - . Parent=GSCOCT00038213001 | |
| 75311 chr11 manual_curation exon 32744946 32745104 . - . Parent=GSCOCT00038213001 | |
| 75312 chr11 manual_curation exon 32745210 32745339 . - . Parent=GSCOCT00038213001 | |
| 75313 chr11 manual_curation exon 32745444 32745535 . - . Parent=GSCOCT00038213001 | |
| 75314 chr11 manual_curation exon 32745598 32745735 . - . Parent=GSCOCT00038213001 | |
| 75315 chr11 manual_curation exon 32745856 32745995 . - . Parent=GSCOCT00038213001 | |
| 75316 chr11 manual_curation exon 32747346 32747454 . - . Parent=GSCOCT00038213001 | |
| 75317 chr11 manual_curation exon 32747545 32747923 . - . Parent=GSCOCT00038213001 | |
| 75318 chr11 manual_curation exon 32748135 32748298 . - . Parent=GSCOCT00038213001 | |
| 75319 chr11 manual_curation exon 32748828 32748938 . - . Parent=GSCOCT00038213001 | |
| 75320 chr11 manual_curation exon 32749261 32749403 . - . Parent=GSCOCT00038213001 | |
| 75321 chr11 manual_curation exon 32749791 32749896 . - . Parent=GSCOCT00038213001 | |
| 75322 chr11 manual_curation exon 32750006 32750051 . - . Parent=GSCOCT00038213001 | |
| 75323 chr11 manual_curation exon 32750384 32750457 . - . Parent=GSCOCT00038213001 | |
| 75324 chr11 manual_curation exon 32750969 32751094 . - . Parent=GSCOCT00038213001 | |
| 75325 chr11 manual_curation CDS 32742753 32742974 . - 0 Parent=GSCOCT00038213001 | |
| 75326 chr11 manual_curation CDS 32743056 32743127 . - 0 Parent=GSCOCT00038213001 | |
| 75327 chr11 manual_curation CDS 32743388 32743522 . - 0 Parent=GSCOCT00038213001 | |
| 75328 chr11 manual_curation CDS 32744110 32744277 . - 0 Parent=GSCOCT00038213001 | |
| 75329 chr11 manual_curation CDS 32744946 32745104 . - 0 Parent=GSCOCT00038213001 | |
| 75330 chr11 manual_curation CDS 32745210 32745339 . - 2 Parent=GSCOCT00038213001 | |
| 75331 chr11 manual_curation CDS 32745444 32745535 . - 0 Parent=GSCOCT00038213001 | |
| 75332 chr11 manual_curation CDS 32745598 32745735 . - 0 Parent=GSCOCT00038213001 | |
| 75333 chr11 manual_curation CDS 32745856 32745995 . - 1 Parent=GSCOCT00038213001 | |
| 75334 chr11 manual_curation CDS 32747346 32747454 . - 0 Parent=GSCOCT00038213001 | |
| 75335 chr11 manual_curation CDS 32747545 32747923 . - 2 Parent=GSCOCT00038213001 | |
| 75336 chr11 manual_curation CDS 32748135 32748298 . - 0 Parent=GSCOCT00038213001 | |
| 75337 chr11 manual_curation CDS 32748828 32748938 . - 0 Parent=GSCOCT00038213001 | |
| 75338 chr11 manual_curation CDS 32749261 32749403 . - 1 Parent=GSCOCT00038213001 | |
| 75339 chr11 manual_curation CDS 32749791 32749896 . - 0 Parent=GSCOCT00038213001 | |
| 75340 chr11 manual_curation CDS 32750006 32750051 . - 2 Parent=GSCOCT00038213001 | |
| 75341 chr11 manual_curation CDS 32750384 32750457 . - 0 Parent=GSCOCT00038213001 | |
| 75342 chr11 manual_curation CDS 32750969 32751094 . - 0 Parent=GSCOCT00038213001 | |
| 75343 chr11 manual_curation gene 32755563 32759967 . + . ID=GSCOCG00038215001;Name=Cc11_g16700 | |
| 75344 chr11 manual_curation mRNA 32755563 32759967 . + . ID=GSCOCT00038215001;Parent=GSCOCG00038215001;Name=Cc11_g16700 | |
| 75345 chr11 manual_curation polypeptide 32755727 32759720 . + . ID=GSCOCP00038215001;Dbxref=GENE3D:G3DSA:1.25.40.20,InterPro:IPR002110,InterPro:IPR020683,PFAM:PF00023,PROFILE:PS50088,PROFILE:PS50297,SMART:SM00248,SUPERFAMILY:SSF48403,SwissProt:Q01484,SwissProt:Q12955,SwissProt:Q8C8R3,TAIR:AT5G14230.1,TrEMBL:A5BXS4,TrEMBL:D7UBE5,TrEMBL:F6HG58;Derives_from=GSCOCT00038215001;Name=Cc11_g16700;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:CONTAINS InterPro DOMAIN/s,CC_functional_completeness:complete,CC_gene:ANK3,CC_gene:ANK2,CC_gene:Ank2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038215001~ CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683)%2C Ankyrin repeat (InterPro:IPR002110)%3B BEST Arabidopsis thaliana protein match is: XB3 ortholog 2 in Arabidopsis thaliana (TAIR:AT5G57740.1)%3B Has 66374 Blast hits to 25358 proteins in 1201 species: Archae - 121%3B Bacteria - 8133%3B Metazoa - 29530%3B Fungi - 5885%3B Plants - 3349%3B Viruses - 785%3B Other Eukaryotes - 18571 (source: NCBI BLink).~ ANK3~ complete;original_location=join(1030421..1030753%2C1031937..1032212%2C1032525..1032662%2C1032882..1034414);owner=coffea | |
| 75346 chr11 manual_curation exon 32755563 32756059 . + . Parent=GSCOCT00038215001 | |
| 75347 chr11 manual_curation exon 32757243 32757518 . + . Parent=GSCOCT00038215001 | |
| 75348 chr11 manual_curation exon 32757831 32757968 . + . Parent=GSCOCT00038215001 | |
| 75349 chr11 manual_curation exon 32758188 32759967 . + . Parent=GSCOCT00038215001 | |
| 75350 chr11 manual_curation CDS 32755727 32756059 . + 0 Parent=GSCOCT00038215001 | |
| 75351 chr11 manual_curation CDS 32757243 32757518 . + 0 Parent=GSCOCT00038215001 | |
| 75352 chr11 manual_curation CDS 32757831 32757968 . + 0 Parent=GSCOCT00038215001 | |
| 75353 chr11 manual_curation CDS 32758188 32759720 . + 0 Parent=GSCOCT00038215001 | |
| 75354 chr11 manual_curation gene 32761046 32765090 . + . ID=GSCOCG00038216001;Name=Cc11_g16710 | |
| 75355 chr11 manual_curation mRNA 32761046 32765090 . + . ID=GSCOCT00038216001;Parent=GSCOCG00038216001;Name=Cc11_g16710 | |
| 75356 chr11 manual_curation polypeptide 32761046 32764674 . + . ID=GSCOCP00038216001;Dbxref=InterPro:IPR001949,InterPro:IPR011537,InterPro:IPR011538,InterPro:IPR019554,InterPro:IPR019575,PFAM:PF01512,PFAM:PF10531,PFAM:PF10589,PROSITE:PS00644,PROSITE:PS00645,SwissProt:Q54I90,SwissProt:Q91YT0,TIGRFAMs:TIGR01959;Derives_from=GSCOCT00038216001;Name=Cc11_g16710;Ontology_term=CC_evidence_code:ISS,GO:0008137,GO:0010181,GO:0051287,GO:0055114,CC_EC_number:1.6.99.3,PRODUCT:NADH dehydrogenase [ubiquinone] flavoprotein 1%2C mitochondrial,CC_functional_completeness:complete,CC_gene:At5g08530,CC_gene:ndufv1,CC_gene:Ndufv1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038216001~ NADH dehydrogenase [ubiquinone] flavoprotein 1%2C mitochondrial~ At5g08530~ complete;original_location=join(1035740..1035778%2C1036250..1036270%2C1037164..1038535%2C1038594..1038634%2C1039174..1039368);owner=coffea | |
| 75357 chr11 manual_curation exon 32761046 32761084 . + . Parent=GSCOCT00038216001 | |
| 75358 chr11 manual_curation exon 32761556 32761576 . + . Parent=GSCOCT00038216001 | |
| 75359 chr11 manual_curation exon 32762470 32763841 . + . Parent=GSCOCT00038216001 | |
| 75360 chr11 manual_curation exon 32763900 32763940 . + . Parent=GSCOCT00038216001 | |
| 75361 chr11 manual_curation exon 32764480 32765090 . + . Parent=GSCOCT00038216001 | |
| 75362 chr11 manual_curation CDS 32761046 32761084 . + 0 Parent=GSCOCT00038216001 | |
| 75363 chr11 manual_curation CDS 32761556 32761576 . + 0 Parent=GSCOCT00038216001 | |
| 75364 chr11 manual_curation CDS 32762470 32763841 . + 0 Parent=GSCOCT00038216001 | |
| 75365 chr11 manual_curation CDS 32763900 32763940 . + 1 Parent=GSCOCT00038216001 | |
| 75366 chr11 manual_curation CDS 32764480 32764674 . + 0 Parent=GSCOCT00038216001 | |
| 75367 chr11 manual_curation gene 32766179 32773614 . + . ID=GSCOCG00038217001;Name=Cc11_g16720 | |
| 75368 chr11 manual_curation mRNA 32766179 32773614 . + . ID=GSCOCT00038217001;Parent=GSCOCG00038217001;Name=Cc11_g16720 | |
| 75369 chr11 manual_curation polypeptide 32767459 32772324 . + . ID=GSCOCP00038217001;Dbxref=TAIR:AT2G42320.1,TAIR:AT3G01810.1,TAIR:AT5G43230.1,TrEMBL:B9RBL2,TrEMBL:B9RMI3,TrEMBL:F6I5K3;Derives_from=GSCOCT00038217001;Name=Cc11_g16720;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative FUNCTIONS IN,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038217001~ Putative FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2)%3B Has 1327 Blast hits to 470 proteins in 132 species: Archae - 2%3B Bacteria - 131%3B Metazoa - 139%3B Fungi - 114%3B Plants - 114%3B Viruses - 0%3B Other Eukaryotes - 827 (source: NCBI BLink).~ unknown_gene~ modules;original_location=join(1042153..1042818%2C1043090..1044189%2C1044476..1044764%2C1044863..1045087%2C1045474..1045647%2C1046120..1046308%2C1046394..1046507%2C1046686..1047018);owner=coffea | |
| 75370 chr11 manual_curation exon 32766179 32768124 . + . Parent=GSCOCT00038217001 | |
| 75371 chr11 manual_curation exon 32768396 32769495 . + . Parent=GSCOCT00038217001 | |
| 75372 chr11 manual_curation exon 32769782 32770070 . + . Parent=GSCOCT00038217001 | |
| 75373 chr11 manual_curation exon 32770169 32770393 . + . Parent=GSCOCT00038217001 | |
| 75374 chr11 manual_curation exon 32770780 32770953 . + . Parent=GSCOCT00038217001 | |
| 75375 chr11 manual_curation exon 32771426 32771614 . + . Parent=GSCOCT00038217001 | |
| 75376 chr11 manual_curation exon 32771700 32771813 . + . Parent=GSCOCT00038217001 | |
| 75377 chr11 manual_curation exon 32771992 32773614 . + . Parent=GSCOCT00038217001 | |
| 75378 chr11 manual_curation CDS 32767459 32768124 . + 0 Parent=GSCOCT00038217001 | |
| 75379 chr11 manual_curation CDS 32768396 32769495 . + 0 Parent=GSCOCT00038217001 | |
| 75380 chr11 manual_curation CDS 32769782 32770070 . + 2 Parent=GSCOCT00038217001 | |
| 75381 chr11 manual_curation CDS 32770169 32770393 . + 0 Parent=GSCOCT00038217001 | |
| 75382 chr11 manual_curation CDS 32770780 32770953 . + 0 Parent=GSCOCT00038217001 | |
| 75383 chr11 manual_curation CDS 32771426 32771614 . + 0 Parent=GSCOCT00038217001 | |
| 75384 chr11 manual_curation CDS 32771700 32771813 . + 0 Parent=GSCOCT00038217001 | |
| 75385 chr11 manual_curation CDS 32771992 32772324 . + 0 Parent=GSCOCT00038217001 | |
| 75386 chr11 manual_curation gene 32774774 32777956 . - . ID=GSCOCG00038219001;Name=Cc11_g16730 | |
| 75387 chr11 manual_curation mRNA 32774774 32777956 . - . ID=GSCOCT00038219001;Parent=GSCOCG00038219001;Name=Cc11_g16730 | |
| 75388 chr11 manual_curation polypeptide 32774774 32777021 . - . ID=GSCOCP00038219001;Dbxref=InterPro:IPR003323,PFAM:PF02338,PROFILE:PS50802,SwissProt:Q8LBZ4,TAIR:AT2G38025.1,TAIR:AT3G57810.2,TrEMBL:A5AJL3,TrEMBL:B9RMI0,TrEMBL:F6HL65;Derives_from=GSCOCT00038219001;Name=Cc11_g16730;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:OTU domain-containing protein At3g57810,CC_functional_completeness:fragment,CC_gene:At3g57810;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038219001~ OTU domain-containing protein At3g57810~ At3g57810~ fragment;original_location=complement(join(1051566..1051715%2C1050983..1051023%2C1050434..1050532%2C1050121..1050285%2C1049468..1049474));owner=coffea | |
| 75389 chr11 manual_curation exon 32774774 32774780 . - . Parent=GSCOCT00038219001 | |
| 75390 chr11 manual_curation exon 32775427 32775591 . - . Parent=GSCOCT00038219001 | |
| 75391 chr11 manual_curation exon 32775740 32775838 . - . Parent=GSCOCT00038219001 | |
| 75392 chr11 manual_curation exon 32776289 32776329 . - . Parent=GSCOCT00038219001 | |
| 75393 chr11 manual_curation exon 32776872 32777956 . - . Parent=GSCOCT00038219001 | |
| 75394 chr11 manual_curation CDS 32774774 32774780 . - 2 Parent=GSCOCT00038219001 | |
| 75395 chr11 manual_curation CDS 32775427 32775591 . - 2 Parent=GSCOCT00038219001 | |
| 75396 chr11 manual_curation CDS 32775740 32775838 . - 2 Parent=GSCOCT00038219001 | |
| 75397 chr11 manual_curation CDS 32776289 32776329 . - 0 Parent=GSCOCT00038219001 | |
| 75398 chr11 manual_curation CDS 32776872 32777021 . - 0 Parent=GSCOCT00038219001 | |
| 75399 chr11 manual_curation gene 32779697 32781490 . + . ID=GSCOCG00038220001;Name=Cc11_g16740 | |
| 75400 chr11 manual_curation mRNA 32779697 32781490 . + . ID=GSCOCT00038220001;Parent=GSCOCG00038220001;Name=Cc11_g16740 | |
| 75401 chr11 manual_curation polypeptide 32779738 32781327 . + . ID=GSCOCP00038220001;Dbxref=InterPro:IPR003593,InterPro:IPR003959,InterPro:IPR003960,PFAM:PF00004,PROSITE:PS00674,SMART:SM00382,SwissProt:Q54DY9,SwissProt:Q7ZV60,SwissProt:Q9P6Q3,TAIR:AT3G50930.1,TAIR:AT3G50940.1,TAIR:AT5G17760.1,TrEMBL:A5B9N9,TrEMBL:B9HL83,TrEMBL:F6HG64;Derives_from=GSCOCT00038220001;Name=Cc11_g16740;Ontology_term=CC_evidence_code:ISS,GO:0000166,GO:0005524,GO:0017111,CC_EC_number:missing_EC_number,PRODUCT:P-loop containing nucleoside triphosphate hydrolases superfamily protein,CC_functional_completeness:complete,CC_gene:SPAC644.07,CC_gene:bcs1l,CC_gene:bcsl1b;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038220001~ P-loop containing nucleoside triphosphate hydrolases superfamily protein~ SPAC644.07~ complete;original_location=join(1054432..1054533%2C1054627..1055424%2C1055557..1056021);owner=coffea | |
| 75402 chr11 manual_curation exon 32779697 32779839 . + . Parent=GSCOCT00038220001 | |
| 75403 chr11 manual_curation exon 32779933 32780730 . + . Parent=GSCOCT00038220001 | |
| 75404 chr11 manual_curation exon 32780863 32781490 . + . Parent=GSCOCT00038220001 | |
| 75405 chr11 manual_curation CDS 32779738 32779839 . + 0 Parent=GSCOCT00038220001 | |
| 75406 chr11 manual_curation CDS 32779933 32780730 . + 0 Parent=GSCOCT00038220001 | |
| 75407 chr11 manual_curation CDS 32780863 32781327 . + 0 Parent=GSCOCT00038220001 | |
| 75408 chr11 manual_curation gene 32782321 32783091 . + . ID=GSCOCG00038221001;Name=Cc11_g16750 | |
| 75409 chr11 manual_curation mRNA 32782321 32783091 . + . ID=GSCOCT00038221001;Parent=GSCOCG00038221001;Name=Cc11_g16750 | |
| 75410 chr11 manual_curation polypeptide 32782321 32783091 . + . ID=GSCOCP00038221001;Dbxref=TAIR:AT1G67540.2,TrEMBL:A5C6S6,TrEMBL:B9HL84,TrEMBL:B9HT96;Derives_from=GSCOCT00038221001;Name=Cc11_g16750;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038221001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=1057015..1057785;owner=coffea | |
| 75411 chr11 manual_curation exon 32782321 32783091 . + . Parent=GSCOCT00038221001 | |
| 75412 chr11 manual_curation CDS 32782321 32783091 . + 0 Parent=GSCOCT00038221001 | |
| 75413 chr11 manual_curation gene 32784972 32790127 . - . ID=GSCOCG00038222001;Name=Cc11_g16760 | |
| 75414 chr11 manual_curation mRNA 32784972 32790127 . - . ID=GSCOCT00038222001;Parent=GSCOCG00038222001;Name=Cc11_g16760 | |
| 75415 chr11 manual_curation polypeptide 32785331 32789171 . - . ID=GSCOCP00038222001;Dbxref=GENE3D:G3DSA:1.25.10.10,InterPro:IPR000225,InterPro:IPR003613,InterPro:IPR011989,InterPro:IPR016024,PFAM:PF04564,SMART:SM00185,SMART:SM00504,SUPERFAMILY:SSF48371,SwissProt:O48700,SwissProt:Q9C7G1,SwissProt:Q9CAG5,TAIR:AT1G24330.1,TAIR:AT1G27910.1,TAIR:AT1G67530.1,TrEMBL:A5C9K5,TrEMBL:B9HT95,TrEMBL:F6HG65;Derives_from=GSCOCT00038222001;Name=Cc11_g16760;Ontology_term=CC_evidence_code:ISS,GO:0000151,GO:0004842,GO:0005488,GO:0016567,CC_EC_number:missing_EC_number,PRODUCT:U-box domain-containing protein 6,CC_functional_completeness:complete,CC_gene:PUB6,CC_gene:PUB45,CC_gene:PUB7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038222001~ U-box domain-containing protein 6~ PUB6~ complete;original_location=complement(join(1063815..1063865%2C1063147..1063332%2C1062656..1062763%2C1060987..1062164%2C1060025..1060811));owner=coffea | |
| 75416 chr11 manual_curation exon 32789776 32790127 . - . Parent=GSCOCT00038222001 | |
| 75417 chr11 manual_curation exon 32784972 32786117 . - . Parent=GSCOCT00038222001 | |
| 75418 chr11 manual_curation exon 32786293 32787470 . - . Parent=GSCOCT00038222001 | |
| 75419 chr11 manual_curation exon 32787962 32788069 . - . Parent=GSCOCT00038222001 | |
| 75420 chr11 manual_curation exon 32788453 32788638 . - . Parent=GSCOCT00038222001 | |
| 75421 chr11 manual_curation exon 32789121 32789205 . - . Parent=GSCOCT00038222001 | |
| 75422 chr11 manual_curation CDS 32785331 32786117 . - 2 Parent=GSCOCT00038222001 | |
| 75423 chr11 manual_curation CDS 32786293 32787470 . - 0 Parent=GSCOCT00038222001 | |
| 75424 chr11 manual_curation CDS 32787962 32788069 . - 0 Parent=GSCOCT00038222001 | |
| 75425 chr11 manual_curation CDS 32788453 32788638 . - 0 Parent=GSCOCT00038222001 | |
| 75426 chr11 manual_curation CDS 32789121 32789171 . - 0 Parent=GSCOCT00038222001 | |
| 75427 chr11 manual_curation gene 32799532 32804634 . + . ID=GSCOCG00038224001;Name=Cc11_g16770 | |
| 75428 chr11 manual_curation mRNA 32799532 32804634 . + . ID=GSCOCT00038224001;Parent=GSCOCG00038224001;Name=Cc11_g16770 | |
| 75429 chr11 manual_curation polypeptide 32799532 32803857 . + . ID=GSCOCP00038224001;Dbxref=InterPro:IPR000243,InterPro:IPR001353,InterPro:IPR016050,PFAM:PF00227,PRINTS:PR00141,PROSITE:PS00854,SwissProt:O23717,SwissProt:O24361,SwissProt:Q9LIP2,TAIR:AT1G13060.2,TAIR:AT3G26340.1,TAIR:AT4G31300.2,TrEMBL:C6TLJ9,TrEMBL:D7TAR8,TrEMBL:I1KC47;Derives_from=GSCOCT00038224001;Name=Cc11_g16770;Ontology_term=CC_evidence_code:ISS,GO:0004175,GO:0004298,GO:0005839,GO:0051603,CC_EC_number:3.4.25.1,PRODUCT:Proteasome subunit beta type-5-B,CC_functional_completeness:modules,CC_gene:PBE2,CC_gene:PBE1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038224001~ Proteasome subunit beta type-5-B~ PBE2~ modules;original_location=join(1074226..1074341%2C1074425..1074503%2C1074716..1074838%2C1074930..1075059%2C1076767..1076873%2C1077684..1077818%2C1077917..1078020%2C1078216..1078316%2C1078427..1078551);owner=coffea | |
| 75430 chr11 manual_curation exon 32799532 32799647 . + . Parent=GSCOCT00038224001 | |
| 75431 chr11 manual_curation exon 32799731 32799809 . + . Parent=GSCOCT00038224001 | |
| 75432 chr11 manual_curation exon 32800022 32800144 . + . Parent=GSCOCT00038224001 | |
| 75433 chr11 manual_curation exon 32800236 32800365 . + . Parent=GSCOCT00038224001 | |
| 75434 chr11 manual_curation exon 32802073 32802179 . + . Parent=GSCOCT00038224001 | |
| 75435 chr11 manual_curation exon 32802990 32803124 . + . Parent=GSCOCT00038224001 | |
| 75436 chr11 manual_curation exon 32803223 32803326 . + . Parent=GSCOCT00038224001 | |
| 75437 chr11 manual_curation exon 32803522 32803622 . + . Parent=GSCOCT00038224001 | |
| 75438 chr11 manual_curation exon 32803733 32804634 . + . Parent=GSCOCT00038224001 | |
| 75439 chr11 manual_curation CDS 32799532 32799647 . + 0 Parent=GSCOCT00038224001 | |
| 75440 chr11 manual_curation CDS 32799731 32799809 . + 2 Parent=GSCOCT00038224001 | |
| 75441 chr11 manual_curation CDS 32800022 32800144 . + 0 Parent=GSCOCT00038224001 | |
| 75442 chr11 manual_curation CDS 32800236 32800365 . + 0 Parent=GSCOCT00038224001 | |
| 75443 chr11 manual_curation CDS 32802073 32802179 . + 1 Parent=GSCOCT00038224001 | |
| 75444 chr11 manual_curation CDS 32802990 32803124 . + 0 Parent=GSCOCT00038224001 | |
| 75445 chr11 manual_curation CDS 32803223 32803326 . + 0 Parent=GSCOCT00038224001 | |
| 75446 chr11 manual_curation CDS 32803522 32803622 . + 2 Parent=GSCOCT00038224001 | |
| 75447 chr11 manual_curation CDS 32803733 32803857 . + 1 Parent=GSCOCT00038224001 | |
| 75448 chr11 manual_curation gene 32807212 32810858 . + . ID=GSCOCG00038225001;Name=Cc11_g16780 | |
| 75449 chr11 manual_curation mRNA 32807212 32810858 . + . ID=GSCOCT00038225001;Parent=GSCOCG00038225001;Name=Cc11_g16780 | |
| 75450 chr11 manual_curation polypeptide 32807452 32810472 . + . ID=GSCOCP00038225001;Dbxref=InterPro:IPR000719,InterPro:IPR001611,InterPro:IPR002290,InterPro:IPR003591,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR013210,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PFAM:PF00560,PFAM:PF08263,PROFILE:PS50011,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SMART:SM00369,SUPERFAMILY:SSF56112,SwissProt:C0LGS3,SwissProt:Q94C77,SwissProt:Q9C9N5,TAIR:AT1G25320.1,TAIR:AT1G67510.1,TAIR:AT2G01210.1,TrEMBL:B9RMH3,TrEMBL:F6HG66,TrEMBL:G7KTA0;Derives_from=GSCOCT00038225001;Name=Cc11_g16780;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005515,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Putative Probable inactive leucine-rich repeat receptor-like protein kinase At1g66830,CC_functional_completeness:complete,CC_gene:At1g66830,CC_gene:At4g34220,CC_gene:At4g37250;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038225001~ Putative Probable inactive leucine-rich repeat receptor-like protein kinase At1g66830~ At1g66830~ complete;original_location=join(1082146..1083667%2C1084532..1085166);owner=coffea | |
| 75451 chr11 manual_curation exon 32807212 32808973 . + . Parent=GSCOCT00038225001 | |
| 75452 chr11 manual_curation exon 32809838 32810858 . + . Parent=GSCOCT00038225001 | |
| 75453 chr11 manual_curation CDS 32807452 32808973 . + 0 Parent=GSCOCT00038225001 | |
| 75454 chr11 manual_curation CDS 32809838 32810472 . + 1 Parent=GSCOCT00038225001 | |
| 75455 chr11 manual_curation gene 32810988 32813131 . - . ID=GSCOCG00038226001;Name=Cc11_g16790 | |
| 75456 chr11 manual_curation mRNA 32810988 32813131 . - . ID=GSCOCT00038226001;Parent=GSCOCG00038226001;Name=Cc11_g16790 | |
| 75457 chr11 manual_curation polypeptide 32811202 32813131 . - . ID=GSCOCP00038226001;Dbxref=InterPro:IPR002328,InterPro:IPR011032,InterPro:IPR013149,InterPro:IPR013154,InterPro:IPR020843,PFAM:PF00107,PFAM:PF08240,PROSITE:PS00059,SMART:SM00829,SUPERFAMILY:SSF50129,SwissProt:P93257,SwissProt:Q2KNL6,SwissProt:Q9ZRF1,TAIR:AT4G37970.1,TAIR:AT4G37980.1,TAIR:AT4G39330.1,TrEMBL:D7TRT6,TrEMBL:F6L7F5,TrEMBL:Q5I6D6;Derives_from=GSCOCT00038226001;Name=Cc11_g16790;Ontology_term=CC_evidence_code:ISS,GO:0008270,GO:0016491,GO:0055114,CC_EC_number:1.1.1.255,PRODUCT:Probable mannitol dehydrogenase,CC_functional_completeness:modules,CC_gene:ELI3,CC_gene:CAD,CC_gene:GEDH1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038226001~ Probable mannitol dehydrogenase~ ELI3~ modules;original_location=complement(join(1087724..1087825%2C1087586..1087650%2C1087168..1087195%2C1085896..1087086));owner=coffea | |
| 75458 chr11 manual_curation exon 32810988 32812392 . - . Parent=GSCOCT00038226001 | |
| 75459 chr11 manual_curation exon 32812474 32812501 . - . Parent=GSCOCT00038226001 | |
| 75460 chr11 manual_curation exon 32812892 32812956 . - . Parent=GSCOCT00038226001 | |
| 75461 chr11 manual_curation exon 32813030 32813131 . - . Parent=GSCOCT00038226001 | |
| 75462 chr11 manual_curation CDS 32811202 32812392 . - 0 Parent=GSCOCT00038226001 | |
| 75463 chr11 manual_curation CDS 32812474 32812501 . - 2 Parent=GSCOCT00038226001 | |
| 75464 chr11 manual_curation CDS 32812892 32812956 . - 0 Parent=GSCOCT00038226001 | |
| 75465 chr11 manual_curation CDS 32813030 32813131 . - 0 Parent=GSCOCT00038226001 | |
| 75466 chr11 manual_curation gene 32813497 32816414 . + . ID=GSCOCG00038227001;Name=Cc11_g16800 | |
| 75467 chr11 manual_curation mRNA 32813497 32816414 . + . ID=GSCOCT00038227001;Parent=GSCOCG00038227001;Name=Cc11_g16800 | |
| 75468 chr11 manual_curation polypeptide 32813497 32816037 . + . ID=GSCOCP00038227001;Dbxref=GENE3D:G3DSA:3.90.470.10,InterPro:IPR001063,InterPro:IPR005721,InterPro:IPR018260,PANTHER:PTHR11593,PFAM:PF00237,PROSITE:PS00464,SUPERFAMILY:SSF54843,SwissProt:O48557,TIGRFAMs:TIGR01038;Derives_from=GSCOCT00038227001;Name=Cc11_g16800;Ontology_term=CC_evidence_code:ISS,GO:0003735,GO:0005622,GO:0005840,GO:0006412,GO:0015934,CC_EC_number:missing_EC_number,PRODUCT:60S ribosomal protein L17,CC_functional_completeness:complete,CC_gene:RPL17B,CC_gene:RPL17A,CC_gene:RPL17;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038227001~ 60S ribosomal protein L17~ RPL17B~ complete;original_location=join(1088191..1088215%2C1088294..1088352%2C1088500..1088536%2C1088686..1088726%2C1090004..1090234%2C1090314..1090416%2C1090500..1090567%2C1090690..1090731);owner=coffea | |
| 75469 chr11 manual_curation exon 32813497 32813521 . + . Parent=GSCOCT00038227001 | |
| 75470 chr11 manual_curation exon 32813600 32813658 . + . Parent=GSCOCT00038227001 | |
| 75471 chr11 manual_curation exon 32813806 32813842 . + . Parent=GSCOCT00038227001 | |
| 75472 chr11 manual_curation exon 32813992 32814032 . + . Parent=GSCOCT00038227001 | |
| 75473 chr11 manual_curation exon 32815310 32815540 . + . Parent=GSCOCT00038227001 | |
| 75474 chr11 manual_curation exon 32815620 32815722 . + . Parent=GSCOCT00038227001 | |
| 75475 chr11 manual_curation exon 32815806 32815873 . + . Parent=GSCOCT00038227001 | |
| 75476 chr11 manual_curation exon 32815996 32816414 . + . Parent=GSCOCT00038227001 | |
| 75477 chr11 manual_curation CDS 32813497 32813521 . + 0 Parent=GSCOCT00038227001 | |
| 75478 chr11 manual_curation CDS 32813600 32813658 . + 1 Parent=GSCOCT00038227001 | |
| 75479 chr11 manual_curation CDS 32813806 32813842 . + 0 Parent=GSCOCT00038227001 | |
| 75480 chr11 manual_curation CDS 32813992 32814032 . + 1 Parent=GSCOCT00038227001 | |
| 75481 chr11 manual_curation CDS 32815310 32815540 . + 0 Parent=GSCOCT00038227001 | |
| 75482 chr11 manual_curation CDS 32815620 32815722 . + 0 Parent=GSCOCT00038227001 | |
| 75483 chr11 manual_curation CDS 32815806 32815873 . + 1 Parent=GSCOCT00038227001 | |
| 75484 chr11 manual_curation CDS 32815996 32816037 . + 0 Parent=GSCOCT00038227001 | |
| 75485 chr11 manual_curation gene 32822742 32824633 . + . ID=GSCOCG00038228001;Name=Cc11_g16810 | |
| 75486 chr11 manual_curation mRNA 32822742 32824633 . + . ID=GSCOCT00038228001;Parent=GSCOCG00038228001;Name=Cc11_g16810 | |
| 75487 chr11 manual_curation polypeptide 32824218 32824633 . + . ID=GSCOCP00038228001;Dbxref=TrEMBL:C6T0T7,TrEMBL:F6HG90;Derives_from=GSCOCT00038228001;Name=Cc11_g16810;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038228001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=join(1098912..1098924%2C1099095..1099327);owner=coffea | |
| 75488 chr11 manual_curation exon 32822742 32823027 . + . Parent=GSCOCT00038228001 | |
| 75489 chr11 manual_curation exon 32824160 32824230 . + . Parent=GSCOCT00038228001 | |
| 75490 chr11 manual_curation exon 32824401 32824633 . + . Parent=GSCOCT00038228001 | |
| 75491 chr11 manual_curation CDS 32824218 32824230 . + 0 Parent=GSCOCT00038228001 | |
| 75492 chr11 manual_curation CDS 32824401 32824633 . + 1 Parent=GSCOCT00038228001 | |
| 75493 chr11 manual_curation gene 32824685 32826683 . + . ID=GSCOCG00038229001;Name=Cc11_g16820 | |
| 75494 chr11 manual_curation mRNA 32824685 32826683 . + . ID=GSCOCT00038229001;Parent=GSCOCG00038229001;Name=Cc11_g16820 | |
| 75495 chr11 manual_curation polypeptide 32824739 32826171 . + . ID=GSCOCP00038229001;Dbxref=GENE3D:G3DSA:2.120.10.80,InterPro:IPR001810,InterPro:IPR006652,InterPro:IPR011043,InterPro:IPR013089,InterPro:IPR015915,PANTHER:PTHR23230,PFAM:PF00646,PFAM:PF01344,SMART:SM00256,SMART:SM00612,SUPERFAMILY:SSF50965,SwissProt:Q93W93,SwissProt:Q9CAG8,SwissProt:Q9FZJ3,TAIR:AT1G27420.1,TAIR:AT1G55270.1,TAIR:AT1G67480.1,TrEMBL:B9RMG2,TrEMBL:D7TAV2,TrEMBL:I1LN95;Derives_from=GSCOCT00038229001;Name=Cc11_g16820;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:F-box/kelch-repeat protein At1g67480,CC_functional_completeness:complete,CC_gene:At1g67480,CC_gene:At1g27420,CC_gene:At1g55270;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038229001~ F-box/kelch-repeat protein At1g67480~ At1g67480~ complete;original_location=join(1099433..1099962%2C1100238..1100865);owner=coffea | |
| 75496 chr11 manual_curation exon 32824685 32825268 . + . Parent=GSCOCT00038229001 | |
| 75497 chr11 manual_curation exon 32825544 32826683 . + . Parent=GSCOCT00038229001 | |
| 75498 chr11 manual_curation CDS 32824739 32825268 . + 0 Parent=GSCOCT00038229001 | |
| 75499 chr11 manual_curation CDS 32825544 32826171 . + 2 Parent=GSCOCT00038229001 | |
| 75500 chr11 manual_curation gene 32890495 32894555 . + . ID=GSCOCG00038230001;Name=Cc11_g16830 | |
| 75501 chr11 manual_curation mRNA 32890495 32894555 . + . ID=GSCOCT00038230001;Parent=GSCOCG00038230001;Name=Cc11_g16830 | |
| 75502 chr11 manual_curation polypeptide 32890804 32894294 . + . ID=GSCOCP00038230001;Dbxref=InterPro:IPR007145,PANTHER:PTHR19321,PFAM:PF03999,SwissProt:Q8LEG3,SwissProt:Q9C7G0,SwissProt:Q9FLP0,TAIR:AT1G27920.1,TAIR:AT4G26760.1,TAIR:AT5G55230.2,TrEMBL:B9GMJ5,TrEMBL:B9RMF5,TrEMBL:D7TAX4;Derives_from=GSCOCT00038230001;Name=Cc11_g16830;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:65-kDa microtubule-associated protein 8,CC_functional_completeness:complete,CC_gene:MAP65-8,CC_gene:MAP65-1,CC_gene:MAP65-2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038230001~ 65-kDa microtubule-associated protein 8~ MAP65-8~ complete;original_location=join(1165498..1165701%2C1166201..1166458%2C1166576..1166788%2C1167116..1167271%2C1167345..1167504%2C1167597..1167748%2C1167832..1167919%2C1168019..1168092%2C1168416..1168490%2C1168659..1168988);owner=coffea | |
| 75503 chr11 manual_curation exon 32890495 32891007 . + . Parent=GSCOCT00038230001 | |
| 75504 chr11 manual_curation exon 32891507 32891764 . + . Parent=GSCOCT00038230001 | |
| 75505 chr11 manual_curation exon 32891882 32892094 . + . Parent=GSCOCT00038230001 | |
| 75506 chr11 manual_curation exon 32892422 32892577 . + . Parent=GSCOCT00038230001 | |
| 75507 chr11 manual_curation exon 32892651 32892810 . + . Parent=GSCOCT00038230001 | |
| 75508 chr11 manual_curation exon 32892903 32893054 . + . Parent=GSCOCT00038230001 | |
| 75509 chr11 manual_curation exon 32893138 32893225 . + . Parent=GSCOCT00038230001 | |
| 75510 chr11 manual_curation exon 32893325 32893398 . + . Parent=GSCOCT00038230001 | |
| 75511 chr11 manual_curation exon 32893722 32893796 . + . Parent=GSCOCT00038230001 | |
| 75512 chr11 manual_curation exon 32893965 32894555 . + . Parent=GSCOCT00038230001 | |
| 75513 chr11 manual_curation CDS 32890804 32891007 . + 0 Parent=GSCOCT00038230001 | |
| 75514 chr11 manual_curation CDS 32891507 32891764 . + 0 Parent=GSCOCT00038230001 | |
| 75515 chr11 manual_curation CDS 32891882 32892094 . + 0 Parent=GSCOCT00038230001 | |
| 75516 chr11 manual_curation CDS 32892422 32892577 . + 0 Parent=GSCOCT00038230001 | |
| 75517 chr11 manual_curation CDS 32892651 32892810 . + 0 Parent=GSCOCT00038230001 | |
| 75518 chr11 manual_curation CDS 32892903 32893054 . + 1 Parent=GSCOCT00038230001 | |
| 75519 chr11 manual_curation CDS 32893138 32893225 . + 0 Parent=GSCOCT00038230001 | |
| 75520 chr11 manual_curation CDS 32893325 32893398 . + 1 Parent=GSCOCT00038230001 | |
| 75521 chr11 manual_curation CDS 32893722 32893796 . + 0 Parent=GSCOCT00038230001 | |
| 75522 chr11 manual_curation CDS 32893965 32894294 . + 0 Parent=GSCOCT00038230001 | |
| 75523 chr11 manual_curation gene 32895120 32895524 . - . ID=GSCOCG00038231001;Name=Cc11_g16840 | |
| 75524 chr11 manual_curation mRNA 32895120 32895524 . - . ID=GSCOCT00038231001;Parent=GSCOCG00038231001;Name=Cc11_g16840 | |
| 75525 chr11 manual_curation polypeptide 32895120 32895524 . - . ID=GSCOCP00038231001;Dbxref=GENE3D:G3DSA:1.10.20.10,InterPro:IPR003958,InterPro:IPR009072,PFAM:PF00808,SUPERFAMILY:SSF47113,TAIR:AT5G43250.1,TrEMBL:B9GMJ4,TrEMBL:B9RMF4,TrEMBL:F6HGA3;Derives_from=GSCOCT00038231001;Name=Cc11_g16840;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0005622,GO:0043565,CC_EC_number:missing_EC_number,PRODUCT:nuclear factor Y%2C subunit C13,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038231001~ nuclear factor Y%2C subunit C13~ unknown_gene~ complete;original_location=complement(1169814..1170218);owner=coffea | |
| 75526 chr11 manual_curation exon 32895120 32895524 . - . Parent=GSCOCT00038231001 | |
| 75527 chr11 manual_curation CDS 32895120 32895524 . - 0 Parent=GSCOCT00038231001 | |
| 75528 chr11 manual_curation gene 32896987 32901272 . + . ID=GSCOCG00038233001;Name=Cc11_g16850 | |
| 75529 chr11 manual_curation mRNA 32896987 32901272 . + . ID=GSCOCT00038233001;Parent=GSCOCG00038233001;Name=Cc11_g16850 | |
| 75530 chr11 manual_curation polypeptide 32896987 32900612 . + . ID=GSCOCP00038233001;Dbxref=InterPro:IPR018783,PFAM:PF10163,SwissProt:Q3ZBJ0,SwissProt:Q9JIX0,SwissProt:Q9NPA8,TAIR:AT3G27100.2,TrEMBL:B6T6J7,TrEMBL:B9N101,TrEMBL:C5XGA2;Derives_from=GSCOCT00038233001;Name=Cc11_g16850;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Enhancer of yellow 2 transcription factor homolog,CC_functional_completeness:modules,CC_gene:Eny2,CC_gene:ENY2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038233001~ Enhancer of yellow 2 transcription factor homolog~ Eny2~ modules;original_location=join(1171681..1171835%2C1172156..1172179%2C1172327..1172417%2C1172578..1172672%2C1174077..1174153%2C1175233..1175306);owner=coffea | |
| 75531 chr11 manual_curation exon 32896987 32897141 . + . Parent=GSCOCT00038233001 | |
| 75532 chr11 manual_curation exon 32897462 32897485 . + . Parent=GSCOCT00038233001 | |
| 75533 chr11 manual_curation exon 32897633 32897723 . + . Parent=GSCOCT00038233001 | |
| 75534 chr11 manual_curation exon 32897884 32897978 . + . Parent=GSCOCT00038233001 | |
| 75535 chr11 manual_curation exon 32899383 32899459 . + . Parent=GSCOCT00038233001 | |
| 75536 chr11 manual_curation exon 32900539 32901272 . + . Parent=GSCOCT00038233001 | |
| 75537 chr11 manual_curation CDS 32896987 32897141 . + 0 Parent=GSCOCT00038233001 | |
| 75538 chr11 manual_curation CDS 32897462 32897485 . + 2 Parent=GSCOCT00038233001 | |
| 75539 chr11 manual_curation CDS 32897633 32897723 . + 2 Parent=GSCOCT00038233001 | |
| 75540 chr11 manual_curation CDS 32897884 32897978 . + 0 Parent=GSCOCT00038233001 | |
| 75541 chr11 manual_curation CDS 32899383 32899459 . + 2 Parent=GSCOCT00038233001 | |
| 75542 chr11 manual_curation CDS 32900539 32900612 . + 1 Parent=GSCOCT00038233001 | |
| 75543 chr11 manual_curation gene 32907567 32910638 . + . ID=GSCOCG00038234001;Name=Cc11_g16860 | |
| 75544 chr11 manual_curation mRNA 32907567 32910638 . + . ID=GSCOCT00038234001;Parent=GSCOCG00038234001;Name=Cc11_g16860 | |
| 75545 chr11 manual_curation polypeptide 32907567 32910335 . + . ID=GSCOCP00038234001;Dbxref=GENE3D:G3DSA:1.10.630.10,InterPro:IPR001128,InterPro:IPR002401,InterPro:IPR017972,PANTHER:PTHR19383,PFAM:PF00067,PRINTS:PR00385,PRINTS:PR00463,PROSITE:PS00086,SUPERFAMILY:SSF48264,SwissProt:O48927,SwissProt:O65012,SwissProt:P48420,TAIR:AT1G13710.1,TAIR:AT1G74110.1,TAIR:AT3G61880.2,TrEMBL:A5BES1,TrEMBL:B9GMJ2,TrEMBL:F6HGA4;Derives_from=GSCOCT00038234001;Name=Cc11_g16860;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,GO:0055114,CC_EC_number:1.14.13.21,PRODUCT:Cytochrome P450 78A4,CC_functional_completeness:complete,CC_gene:CYP78A4,CC_gene:CYP78A3,CC_gene:CYP78A1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038234001~ Cytochrome P450 78A4~ CYP78A4~ complete;original_location=join(1182261..1183223%2C1184424..1185029);owner=coffea | |
| 75546 chr11 manual_curation exon 32907567 32908529 . + . Parent=GSCOCT00038234001 | |
| 75547 chr11 manual_curation exon 32909730 32910638 . + . Parent=GSCOCT00038234001 | |
| 75548 chr11 manual_curation CDS 32907567 32908529 . + 0 Parent=GSCOCT00038234001 | |
| 75549 chr11 manual_curation CDS 32909730 32910335 . + 0 Parent=GSCOCT00038234001 | |
| 75550 chr11 manual_curation gene 32917813 32921969 . + . ID=GSCOCG00038237001;Name=Cc11_g16870 | |
| 75551 chr11 manual_curation mRNA 32917813 32921969 . + . ID=GSCOCT00038237001;Parent=GSCOCG00038237001;Name=Cc11_g16870 | |
| 75552 chr11 manual_curation polypeptide 32917914 32921347 . + . ID=GSCOCP00038237001;Dbxref=InterPro:IPR004274,InterPro:IPR011948,PFAM:PF03031,PROFILE:PS50969,SMART:SM00577,SwissProt:Q5F3Z7,SwissProt:Q5XIK8,SwissProt:Q8BG15,TAIR:AT4G18140.1,TAIR:AT5G11860.1,TAIR:AT5G46410.2,TIGRFAMs:TIGR02251,TrEMBL:B9RMF0,TrEMBL:D7TAX7,TrEMBL:I1LN83;Derives_from=GSCOCT00038237001;Name=Cc11_g16870;Ontology_term=CC_evidence_code:ISS,GO:0016791,CC_EC_number:3.1.3.16,PRODUCT:Putative CTD small phosphatase-like protein 2,CC_functional_completeness:complete,CC_gene:CTDSPL2,CC_gene:Ctdspl2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038237001~ Putative CTD small phosphatase-like protein 2~ CTDSPL2~ complete;original_location=join(1192608..1192787%2C1192948..1193116%2C1193192..1193310%2C1193566..1193662%2C1193822..1193968%2C1194060..1194332%2C1194756..1195093%2C1195826..1196041);owner=coffea | |
| 75553 chr11 manual_curation exon 32917813 32918093 . + . Parent=GSCOCT00038237001 | |
| 75554 chr11 manual_curation exon 32918254 32918422 . + . Parent=GSCOCT00038237001 | |
| 75555 chr11 manual_curation exon 32918498 32918616 . + . Parent=GSCOCT00038237001 | |
| 75556 chr11 manual_curation exon 32918872 32918968 . + . Parent=GSCOCT00038237001 | |
| 75557 chr11 manual_curation exon 32919128 32919274 . + . Parent=GSCOCT00038237001 | |
| 75558 chr11 manual_curation exon 32919366 32919638 . + . Parent=GSCOCT00038237001 | |
| 75559 chr11 manual_curation exon 32920062 32920399 . + . Parent=GSCOCT00038237001 | |
| 75560 chr11 manual_curation exon 32921132 32921969 . + . Parent=GSCOCT00038237001 | |
| 75561 chr11 manual_curation CDS 32917914 32918093 . + 0 Parent=GSCOCT00038237001 | |
| 75562 chr11 manual_curation CDS 32918254 32918422 . + 0 Parent=GSCOCT00038237001 | |
| 75563 chr11 manual_curation CDS 32918498 32918616 . + 1 Parent=GSCOCT00038237001 | |
| 75564 chr11 manual_curation CDS 32918872 32918968 . + 0 Parent=GSCOCT00038237001 | |
| 75565 chr11 manual_curation CDS 32919128 32919274 . + 1 Parent=GSCOCT00038237001 | |
| 75566 chr11 manual_curation CDS 32919366 32919638 . + 1 Parent=GSCOCT00038237001 | |
| 75567 chr11 manual_curation CDS 32920062 32920399 . + 1 Parent=GSCOCT00038237001 | |
| 75568 chr11 manual_curation CDS 32921132 32921347 . + 0 Parent=GSCOCT00038237001 | |
| 75569 chr11 manual_curation gene 32929186 32931619 . + . ID=GSCOCG00038238001;Name=Cc11_g16880 | |
| 75570 chr11 manual_curation mRNA 32929186 32931619 . + . ID=GSCOCT00038238001;Parent=GSCOCG00038238001;Name=Cc11_g16880 | |
| 75571 chr11 manual_curation polypeptide 32929446 32931305 . + . ID=GSCOCP00038238001;Dbxref=InterPro:IPR008802,PFAM:PF05755,SwissProt:Q9FYF7,SwissProt:Q9MA63,SwissProt:Q9SW70,TAIR:AT1G67360.2,TAIR:AT2G47780.1,TAIR:AT3G05500.1,TrEMBL:F6HGA5,TrEMBL:I1MYF4,TrEMBL:I1MYF5;Derives_from=GSCOCT00038238001;Name=Cc11_g16880;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative REF/SRPP-like protein At1g67360,CC_functional_completeness:complete,CC_gene:At1g67360,CC_gene:SRP,CC_gene:At3g05500;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038238001~ Putative REF/SRPP-like protein At1g67360~ At1g67360~ complete;original_location=join(1204140..1204364%2C1205556..1205999);owner=coffea | |
| 75572 chr11 manual_curation exon 32929186 32929333 . + . Parent=GSCOCT00038238001 | |
| 75573 chr11 manual_curation exon 32929440 32929670 . + . Parent=GSCOCT00038238001 | |
| 75574 chr11 manual_curation exon 32930862 32931619 . + . Parent=GSCOCT00038238001 | |
| 75575 chr11 manual_curation CDS 32929446 32929670 . + 0 Parent=GSCOCT00038238001 | |
| 75576 chr11 manual_curation CDS 32930862 32931305 . + 0 Parent=GSCOCT00038238001 | |
| 75577 chr11 manual_curation gene 32933422 32934384 . - . ID=GSCOCG00038240001;Name=Cc11_g16890 | |
| 75578 chr11 manual_curation mRNA 32933422 32934384 . - . ID=GSCOCT00038240001;Parent=GSCOCG00038240001;Name=Cc11_g16890 | |
| 75579 chr11 manual_curation polypeptide 32933422 32933967 . - . ID=GSCOCP00038240001;Dbxref=TAIR:AT1G67350.1,TrEMBL:A9P8A9,TrEMBL:B9GZY8,TrEMBL:B9RME7;Derives_from=GSCOCT00038240001;Name=Cc11_g16890;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B Has 2 Blast hits to 2 proteins in 1 species,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038240001~ unknown protein%3B Has 2 Blast hits to 2 proteins in 1 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 2%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ modules;original_location=complement(join(1208372..1208661%2C1208116..1208215));owner=coffea | |
| 75580 chr11 manual_curation exon 32934325 32934384 . - . Parent=GSCOCT00038240001 | |
| 75581 chr11 manual_curation exon 32933422 32933521 . - . Parent=GSCOCT00038240001 | |
| 75582 chr11 manual_curation exon 32933678 32934010 . - . Parent=GSCOCT00038240001 | |
| 75583 chr11 manual_curation CDS 32933422 32933521 . - 2 Parent=GSCOCT00038240001 | |
| 75584 chr11 manual_curation CDS 32933678 32933967 . - 0 Parent=GSCOCT00038240001 | |
| 75585 chr11 manual_curation gene 32938744 32940704 . - . ID=GSCOCG00038241001;Name=Cc11_g16900 | |
| 75586 chr11 manual_curation mRNA 32938744 32940704 . - . ID=GSCOCT00038241001;Parent=GSCOCG00038241001;Name=Cc11_g16900 | |
| 75587 chr11 manual_curation polypeptide 32938975 32940481 . - . ID=GSCOCP00038241001;Dbxref=GENE3D:G3DSA:1.25.40.10,InterPro:IPR002893,InterPro:IPR006597,InterPro:IPR011990,PFAM:PF01753,PFAM:PF08238,PROFILE:PS50865,SwissProt:Q9FK27,SwissProt:Q9FYF9,TAIR:AT1G67340.1,TAIR:AT5G50450.1,TrEMBL:B9GML2,TrEMBL:B9GZP6,TrEMBL:B9RME6;Derives_from=GSCOCT00038241001;Name=Cc11_g16900;Ontology_term=CC_evidence_code:ISS,GO:0005488,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:F-box protein At1g67340,CC_functional_completeness:complete,CC_gene:At1g67340,CC_gene:At5g50450;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038241001~ F-box protein At1g67340~ At1g67340~ complete;original_location=complement(join(1214895..1215175%2C1214658..1214820%2C1213669..1214472));owner=coffea | |
| 75588 chr11 manual_curation exon 32938744 32939778 . - . Parent=GSCOCT00038241001 | |
| 75589 chr11 manual_curation exon 32939964 32940126 . - . Parent=GSCOCT00038241001 | |
| 75590 chr11 manual_curation exon 32940201 32940704 . - . Parent=GSCOCT00038241001 | |
| 75591 chr11 manual_curation CDS 32938975 32939778 . - 0 Parent=GSCOCT00038241001 | |
| 75592 chr11 manual_curation CDS 32939964 32940126 . - 2 Parent=GSCOCT00038241001 | |
| 75593 chr11 manual_curation CDS 32940201 32940481 . - 0 Parent=GSCOCT00038241001 | |
| 75594 chr11 manual_curation gene 32969201 32971701 . + . ID=GSCOCG00038243001;Name=Cc11_g16910 | |
| 75595 chr11 manual_curation mRNA 32969201 32971701 . + . ID=GSCOCT00038243001;Parent=GSCOCG00038243001;Name=Cc11_g16910 | |
| 75596 chr11 manual_curation polypeptide 32969576 32970915 . + . ID=GSCOCP00038243001;Dbxref=InterPro:IPR001344,InterPro:IPR022796,PANTHER:PTHR21649,PFAM:PF00504,SwissProt:P10708,SwissProt:P13869,SwissProt:P27521,TAIR:AT1G19150.1,TAIR:AT3G47470.1,TAIR:AT3G61470.1,TrEMBL:B9GML1,TrEMBL:D7TAY3,TrEMBL:I1KHL4;Derives_from=GSCOCT00038243001;Name=Cc11_g16910;Ontology_term=CC_evidence_code:ISS,GO:0016020,CC_EC_number:missing_EC_number,PRODUCT:Chlorophyll a-b binding protein%2C chloroplastic,CC_functional_completeness:complete,CC_gene:CAB7,CC_gene:LHCA4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038243001~ Chlorophyll a-b binding protein%2C chloroplastic~ CAB7~ complete;original_location=join(1244270..1244562%2C1244672..1244709%2C1244820..1245334%2C1245592..1245609);owner=coffea | |
| 75597 chr11 manual_curation exon 32969201 32969868 . + . Parent=GSCOCT00038243001 | |
| 75598 chr11 manual_curation exon 32969978 32970015 . + . Parent=GSCOCT00038243001 | |
| 75599 chr11 manual_curation exon 32970126 32970640 . + . Parent=GSCOCT00038243001 | |
| 75600 chr11 manual_curation exon 32970898 32971701 . + . Parent=GSCOCT00038243001 | |
| 75601 chr11 manual_curation CDS 32969576 32969868 . + 0 Parent=GSCOCT00038243001 | |
| 75602 chr11 manual_curation CDS 32969978 32970015 . + 2 Parent=GSCOCT00038243001 | |
| 75603 chr11 manual_curation CDS 32970126 32970640 . + 1 Parent=GSCOCT00038243001 | |
| 75604 chr11 manual_curation CDS 32970898 32970915 . + 0 Parent=GSCOCT00038243001 | |
| 75605 chr11 manual_curation gene 32973645 32973950 . - . ID=GSCOCG00038245001;Name=Cc11_g16920 | |
| 75606 chr11 manual_curation mRNA 32973645 32973950 . - . ID=GSCOCT00038245001;Parent=GSCOCG00038245001;Name=Cc11_g16920 | |
| 75607 chr11 manual_curation polypeptide 32973645 32973950 . - . ID=GSCOCP00038245001;Dbxref=TAIR:AT5G43260.1,TrEMBL:B9RME4,TrEMBL:F6HGA7,TrEMBL:Q6UA14;Derives_from=GSCOCT00038245001;Name=Cc11_g16920;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:chaperone protein dnaJ-related,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038245001~ chaperone protein dnaJ-related~ unknown_gene~ complete;original_location=complement(1248339..1248644);owner=coffea | |
| 75608 chr11 manual_curation exon 32973645 32973950 . - . Parent=GSCOCT00038245001 | |
| 75609 chr11 manual_curation CDS 32973645 32973950 . - 0 Parent=GSCOCT00038245001 | |
| 75610 chr11 manual_curation gene 32975646 32979856 . - . ID=GSCOCG00038246001;Name=Cc11_g16930 | |
| 75611 chr11 manual_curation mRNA 32975646 32979856 . - . ID=GSCOCT00038246001;Parent=GSCOCG00038246001;Name=Cc11_g16930 | |
| 75612 chr11 manual_curation polypeptide 32976120 32979528 . - . ID=GSCOCP00038246001;Dbxref=SwissProt:Q13686,SwissProt:Q54N08,SwissProt:Q9SA98,TAIR:AT1G11780.1,TrEMBL:A5BU64,TrEMBL:B9GZQ0,TrEMBL:I1MYF0;Derives_from=GSCOCT00038246001;Name=Cc11_g16930;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Alpha-ketoglutarate-dependent dioxygenase alkB,CC_functional_completeness:complete,CC_gene:At1g11780,CC_gene:alkB,CC_gene:ALKBH1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038246001~ Alpha-ketoglutarate-dependent dioxygenase alkB~ At1g11780~ complete;original_location=complement(join(1254122..1254222%2C1253872..1254023%2C1253400..1253755%2C1252434..1252572%2C1252160..1252226%2C1251929..1252050%2C1250814..1250953));owner=coffea | |
| 75613 chr11 manual_curation exon 32975646 32976259 . - . Parent=GSCOCT00038246001 | |
| 75614 chr11 manual_curation exon 32977235 32977356 . - . Parent=GSCOCT00038246001 | |
| 75615 chr11 manual_curation exon 32977466 32977532 . - . Parent=GSCOCT00038246001 | |
| 75616 chr11 manual_curation exon 32977740 32977878 . - . Parent=GSCOCT00038246001 | |
| 75617 chr11 manual_curation exon 32978706 32979061 . - . Parent=GSCOCT00038246001 | |
| 75618 chr11 manual_curation exon 32979178 32979329 . - . Parent=GSCOCT00038246001 | |
| 75619 chr11 manual_curation exon 32979428 32979856 . - . Parent=GSCOCT00038246001 | |
| 75620 chr11 manual_curation CDS 32976120 32976259 . - 1 Parent=GSCOCT00038246001 | |
| 75621 chr11 manual_curation CDS 32977235 32977356 . - 2 Parent=GSCOCT00038246001 | |
| 75622 chr11 manual_curation CDS 32977466 32977532 . - 1 Parent=GSCOCT00038246001 | |
| 75623 chr11 manual_curation CDS 32977740 32977878 . - 0 Parent=GSCOCT00038246001 | |
| 75624 chr11 manual_curation CDS 32978706 32979061 . - 1 Parent=GSCOCT00038246001 | |
| 75625 chr11 manual_curation CDS 32979178 32979329 . - 2 Parent=GSCOCT00038246001 | |
| 75626 chr11 manual_curation CDS 32979428 32979528 . - 0 Parent=GSCOCT00038246001 | |
| 75627 chr11 manual_curation gene 32980638 32984950 . + . ID=GSCOCG00038247001;Name=Cc11_g16940 | |
| 75628 chr11 manual_curation mRNA 32980638 32984950 . + . ID=GSCOCT00038247001;Parent=GSCOCG00038247001;Name=Cc11_g16940 | |
| 75629 chr11 manual_curation polypeptide 32980752 32984874 . + . ID=GSCOCP00038247001;Dbxref=InterPro:IPR007454,PFAM:PF04359,TAIR:AT1G27385.4,TrEMBL:B9GZQ1,TrEMBL:D7TAY6;Derives_from=GSCOCT00038247001;Name=Cc11_g16940;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B FUNCTIONS IN,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038247001~ unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF493 (InterPro:IPR007454)%3B Has 79 Blast hits to 79 proteins in 23 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 0%3B Fungi - 0%3B Plants - 72%3B Viruses - 0%3B Other Eukaryotes - 1 (source: NCBI BLink).~ unknown_gene~ fragment;original_location=join(1255446..1255710%2C1256360..1256463%2C1256799..1256912%2C1258995..1259078%2C1259512..1259568);owner=coffea | |
| 75630 chr11 manual_curation exon 32980638 32981016 . + . Parent=GSCOCT00038247001 | |
| 75631 chr11 manual_curation exon 32981666 32981769 . + . Parent=GSCOCT00038247001 | |
| 75632 chr11 manual_curation exon 32982105 32982218 . + . Parent=GSCOCT00038247001 | |
| 75633 chr11 manual_curation exon 32984301 32984384 . + . Parent=GSCOCT00038247001 | |
| 75634 chr11 manual_curation exon 32984818 32984950 . + . Parent=GSCOCT00038247001 | |
| 75635 chr11 manual_curation CDS 32980752 32981016 . + 0 Parent=GSCOCT00038247001 | |
| 75636 chr11 manual_curation CDS 32981666 32981769 . + 1 Parent=GSCOCT00038247001 | |
| 75637 chr11 manual_curation CDS 32982105 32982218 . + 0 Parent=GSCOCT00038247001 | |
| 75638 chr11 manual_curation CDS 32984301 32984384 . + 0 Parent=GSCOCT00038247001 | |
| 75639 chr11 manual_curation CDS 32984818 32984874 . + 0 Parent=GSCOCT00038247001 | |
| 75640 chr11 manual_curation gene 32986392 32987759 . + . ID=GSCOCG00038248001;Name=Cc11_g16950 | |
| 75641 chr11 manual_curation mRNA 32986392 32987759 . + . ID=GSCOCT00038248001;Parent=GSCOCG00038248001;Name=Cc11_g16950 | |
| 75642 chr11 manual_curation polypeptide 32986917 32987759 . + . ID=GSCOCP00038248001;Dbxref=TAIR:AT2G23520.1,TAIR:AT4G37100.1,TAIR:AT5G66950.1,TrEMBL:B9RME1,TrEMBL:D7SGZ3,TrEMBL:F6HGA9;Derives_from=GSCOCT00038248001;Name=Cc11_g16950;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038248001~ Putative uncharacterized protein~ unknown_gene~ fragment;original_location=join(1261611..1261717%2C1261748..1262453);owner=coffea | |
| 75643 chr11 manual_curation exon 32986392 32986513 . + . Parent=GSCOCT00038248001 | |
| 75644 chr11 manual_curation exon 32986603 32987023 . + . Parent=GSCOCT00038248001 | |
| 75645 chr11 manual_curation exon 32987054 32987759 . + . Parent=GSCOCT00038248001 | |
| 75646 chr11 manual_curation CDS 32986917 32987023 . + 0 Parent=GSCOCT00038248001 | |
| 75647 chr11 manual_curation CDS 32987054 32987759 . + 2 Parent=GSCOCT00038248001 | |
| 75648 chr11 manual_curation gene 32993779 32994636 . - . ID=GSCOCG00038249001;Name=Cc11_g16960 | |
| 75649 chr11 manual_curation mRNA 32993779 32994636 . - . ID=GSCOCT00038249001;Parent=GSCOCG00038249001;Name=Cc11_g16960 | |
| 75650 chr11 manual_curation polypeptide 32993779 32994636 . - . ID=GSCOCP00038249001;Dbxref=InterPro:IPR006514,InterPro:IPR021148,PFAM:PF04669,TAIR:AT1G09610.1,TAIR:AT1G27930.1,TAIR:AT1G67330.1,TIGRFAMs:TIGR01627,TrEMBL:B9RME0,TrEMBL:I1LN75,TrEMBL:I1MYE7;Derives_from=GSCOCT00038249001;Name=Cc11_g16960;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF579),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038249001~ Protein of unknown function (DUF579)~ unknown_gene~ complete;original_location=complement(1268473..1269330);owner=coffea | |
| 75651 chr11 manual_curation exon 32993779 32994636 . - . Parent=GSCOCT00038249001 | |
| 75652 chr11 manual_curation CDS 32993779 32994636 . - 0 Parent=GSCOCT00038249001 | |
| 75653 chr11 manual_curation gene 33002503 33004753 . + . ID=GSCOCG00038251001;Name=Cc11_g16970 | |
| 75654 chr11 manual_curation mRNA 33002503 33004753 . + . ID=GSCOCT00038251001;Parent=GSCOCG00038251001;Name=Cc11_g16970 | |
| 75655 chr11 manual_curation polypeptide 33002685 33004515 . + . ID=GSCOCP00038251001;Dbxref=InterPro:IPR003612,InterPro:IPR016140,PFAM:PF00234,SMART:SM00499,SUPERFAMILY:SSF47699,SwissProt:Q9C7F7,TAIR:AT1G27950.1,TAIR:AT2G44290.1,TAIR:AT2G44300.1,TrEMBL:A5AQG3,TrEMBL:B9GZQ5,TrEMBL:B9RMD9;Derives_from=GSCOCT00038251001;Name=Cc11_g16970;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized GPI-anchored protein At1g27950,CC_functional_completeness:complete,CC_gene:At1g27950;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038251001~ Putative Uncharacterized GPI-anchored protein At1g27950~ At1g27950~ complete;original_location=join(1277379..1277715%2C1278980..1279209);owner=coffea | |
| 75656 chr11 manual_curation exon 33002503 33003021 . + . Parent=GSCOCT00038251001 | |
| 75657 chr11 manual_curation exon 33004286 33004753 . + . Parent=GSCOCT00038251001 | |
| 75658 chr11 manual_curation CDS 33002685 33003021 . + 0 Parent=GSCOCT00038251001 | |
| 75659 chr11 manual_curation CDS 33004286 33004515 . + 1 Parent=GSCOCT00038251001 | |
| 75660 chr11 manual_curation gene 33006855 33011182 . + . ID=GSCOCG00038252001;Name=Cc11_g16980 | |
| 75661 chr11 manual_curation mRNA 33006855 33011182 . + . ID=GSCOCT00038252001;Parent=GSCOCG00038252001;Name=Cc11_g16980 | |
| 75662 chr11 manual_curation polypeptide 33006984 33010633 . + . ID=GSCOCP00038252001;Dbxref=InterPro:IPR001876,PFAM:PF00641,SMART:SM00547,SwissProt:Q8GZ43,TAIR:AT1G67325.2,TrEMBL:B9GZQ6,TrEMBL:I1LN72,TrEMBL:I1MYE4;Derives_from=GSCOCT00038252001;Name=Cc11_g16980;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0008270,CC_EC_number:missing_EC_number,PRODUCT:RanBP2-type zinc finger protein At1g67325,CC_functional_completeness:modules,CC_gene:At1g67325;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038252001~ RanBP2-type zinc finger protein At1g67325~ At1g67325~ modules;original_location=join(1281678..1281686%2C1282027..1282072%2C1282932..1283047%2C1283528..1283801%2C1284139..1284209%2C1284437..1284482%2C1284569..1284678%2C1284848..1284872%2C1284942..1285327);owner=coffea | |
| 75663 chr11 manual_curation exon 33006855 33006992 . + . Parent=GSCOCT00038252001 | |
| 75664 chr11 manual_curation exon 33007333 33007378 . + . Parent=GSCOCT00038252001 | |
| 75665 chr11 manual_curation exon 33008238 33008353 . + . Parent=GSCOCT00038252001 | |
| 75666 chr11 manual_curation exon 33008834 33009107 . + . Parent=GSCOCT00038252001 | |
| 75667 chr11 manual_curation exon 33009445 33009515 . + . Parent=GSCOCT00038252001 | |
| 75668 chr11 manual_curation exon 33009743 33009788 . + . Parent=GSCOCT00038252001 | |
| 75669 chr11 manual_curation exon 33009875 33009984 . + . Parent=GSCOCT00038252001 | |
| 75670 chr11 manual_curation exon 33010154 33010178 . + . Parent=GSCOCT00038252001 | |
| 75671 chr11 manual_curation exon 33010248 33011182 . + . Parent=GSCOCT00038252001 | |
| 75672 chr11 manual_curation CDS 33006984 33006992 . + 0 Parent=GSCOCT00038252001 | |
| 75673 chr11 manual_curation CDS 33007333 33007378 . + 0 Parent=GSCOCT00038252001 | |
| 75674 chr11 manual_curation CDS 33008238 33008353 . + 1 Parent=GSCOCT00038252001 | |
| 75675 chr11 manual_curation CDS 33008834 33009107 . + 0 Parent=GSCOCT00038252001 | |
| 75676 chr11 manual_curation CDS 33009445 33009515 . + 1 Parent=GSCOCT00038252001 | |
| 75677 chr11 manual_curation CDS 33009743 33009788 . + 0 Parent=GSCOCT00038252001 | |
| 75678 chr11 manual_curation CDS 33009875 33009984 . + 1 Parent=GSCOCT00038252001 | |
| 75679 chr11 manual_curation CDS 33010154 33010178 . + 0 Parent=GSCOCT00038252001 | |
| 75680 chr11 manual_curation CDS 33010248 33010633 . + 1 Parent=GSCOCT00038252001 | |
| 75681 chr11 manual_curation gene 33014232 33018945 . - . ID=GSCOCG00038253001;Name=Cc11_g16990 | |
| 75682 chr11 manual_curation mRNA 33014232 33018945 . - . ID=GSCOCT00038253001;Parent=GSCOCG00038253001;Name=Cc11_g16990 | |
| 75683 chr11 manual_curation polypeptide 33014693 33018489 . - . ID=GSCOCP00038253001;Dbxref=GENE3D:G3DSA:4.10.1100.10,InterPro:IPR004333,PFAM:PF03110,PROFILE:PS51141,SUPERFAMILY:SSF103612,SwissProt:A2YGR5,SwissProt:A3A2Z8,SwissProt:Q5Z818,TAIR:AT1G27360.1,TAIR:AT1G27370.1,TAIR:AT5G43270.2,TrEMBL:B9RMD6,TrEMBL:F6H9P0,TrEMBL:F6HGB1;Derives_from=GSCOCT00038253001;Name=Cc11_g16990;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0005634,CC_EC_number:missing_EC_number,PRODUCT:Putative squamosa promoter binding protein-like 2,CC_functional_completeness:complete,CC_gene:SPL12,CC_gene:SPL3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038253001~ Putative squamosa promoter binding protein-like 2~ SPL12~ complete;original_location=complement(join(1292525..1293183%2C1292173..1292309%2C1291322..1291558%2C1289387..1289700));owner=coffea | |
| 75684 chr11 manual_curation exon 33018724 33018945 . - . Parent=GSCOCT00038253001 | |
| 75685 chr11 manual_curation exon 33014232 33015006 . - . Parent=GSCOCT00038253001 | |
| 75686 chr11 manual_curation exon 33016628 33016864 . - . Parent=GSCOCT00038253001 | |
| 75687 chr11 manual_curation exon 33017479 33017615 . - . Parent=GSCOCT00038253001 | |
| 75688 chr11 manual_curation exon 33017831 33018531 . - . Parent=GSCOCT00038253001 | |
| 75689 chr11 manual_curation CDS 33014693 33015006 . - 1 Parent=GSCOCT00038253001 | |
| 75690 chr11 manual_curation CDS 33016628 33016864 . - 1 Parent=GSCOCT00038253001 | |
| 75691 chr11 manual_curation CDS 33017479 33017615 . - 2 Parent=GSCOCT00038253001 | |
| 75692 chr11 manual_curation CDS 33017831 33018489 . - 0 Parent=GSCOCT00038253001 | |
| 75693 chr11 manual_curation gene 33019063 33021082 . - . ID=GSCOCG00038254001;Name=Cc11_g17000 | |
| 75694 chr11 manual_curation mRNA 33019063 33021082 . - . ID=GSCOCT00038254001;Parent=GSCOCG00038254001;Name=Cc11_g17000 | |
| 75695 chr11 manual_curation polypeptide 33020059 33020322 . - . ID=GSCOCP00038254001;Derives_from=GSCOCT00038254001;Name=Cc11_g17000;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038254001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=complement(1294753..1295016);owner=coffea | |
| 75696 chr11 manual_curation exon 33019063 33021082 . - . Parent=GSCOCT00038254001 | |
| 75697 chr11 manual_curation CDS 33020059 33020322 . - 0 Parent=GSCOCT00038254001 | |
| 75698 chr11 manual_curation gene 33035575 33039878 . + . ID=GSCOCG00038255001;Name=Cc11_g17010 | |
| 75699 chr11 manual_curation mRNA 33035575 33039878 . + . ID=GSCOCT00038255001;Parent=GSCOCG00038255001;Name=Cc11_g17010 | |
| 75700 chr11 manual_curation polypeptide 33035671 33039425 . + . ID=GSCOCP00038255001;Dbxref=GENE3D:G3DSA:2.120.10.80,InterPro:IPR001810,InterPro:IPR011043,InterPro:IPR015915,InterPro:IPR017451,PFAM:PF00646,PROFILE:PS50181,SMART:SM00256,SUPERFAMILY:SSF50965,SwissProt:Q39090,SwissProt:Q9FZK1,SwissProt:Q9LFV5,TAIR:AT1G27340.1,TAIR:AT1G30950.1,TAIR:AT5G15710.1,TIGRFAMs:TIGR01640,TrEMBL:B8Y9B5,TrEMBL:F6HGB2,TrEMBL:H6VRF3;Derives_from=GSCOCT00038255001;Name=Cc11_g17010;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:F-box only protein 6,CC_functional_completeness:complete,CC_gene:FBX6,CC_gene:At5g15710,CC_gene:UFO;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038255001~ F-box only protein 6~ FBX6~ complete;original_location=join(1310365..1310501%2C1312871..1314051%2C1314109..1314119);owner=coffea | |
| 75701 chr11 manual_curation exon 33035575 33035807 . + . Parent=GSCOCT00038255001 | |
| 75702 chr11 manual_curation exon 33038177 33039357 . + . Parent=GSCOCT00038255001 | |
| 75703 chr11 manual_curation exon 33039415 33039878 . + . Parent=GSCOCT00038255001 | |
| 75704 chr11 manual_curation CDS 33035671 33035807 . + 0 Parent=GSCOCT00038255001 | |
| 75705 chr11 manual_curation CDS 33038177 33039357 . + 2 Parent=GSCOCT00038255001 | |
| 75706 chr11 manual_curation CDS 33039415 33039425 . + 1 Parent=GSCOCT00038255001 | |
| 75707 chr11 manual_curation gene 33041501 33043552 . - . ID=GSCOCG00038257001;Name=Cc11_g17020 | |
| 75708 chr11 manual_curation mRNA 33041501 33043552 . - . ID=GSCOCT00038257001;Parent=GSCOCG00038257001;Name=Cc11_g17020 | |
| 75709 chr11 manual_curation polypeptide 33041789 33042666 . - . ID=GSCOCP00038257001;Dbxref=InterPro:IPR010580,PANTHER:PTHR15601,PFAM:PF06624,TAIR:AT1G27330.1,TAIR:AT1G27350.1,TrEMBL:B9RMD3,TrEMBL:D6BQN4,TrEMBL:F6HGB4;Derives_from=GSCOCT00038257001;Name=Cc11_g17020;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Ribosome associated membrane protein RAMP4,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038257001~ Ribosome associated membrane protein RAMP4~ unknown_gene~ modules;original_location=complement(join(1317208..1317360%2C1316483..1316686));owner=coffea | |
| 75710 chr11 manual_curation exon 33041501 33041992 . - . Parent=GSCOCT00038257001 | |
| 75711 chr11 manual_curation exon 33042514 33043552 . - . Parent=GSCOCT00038257001 | |
| 75712 chr11 manual_curation CDS 33041789 33041992 . - 0 Parent=GSCOCT00038257001 | |
| 75713 chr11 manual_curation CDS 33042514 33042666 . - 0 Parent=GSCOCT00038257001 | |
| 75714 chr11 manual_curation gene 33063359 33071164 . + . ID=GSCOCG00038258001;Name=Cc11_g17030 | |
| 75715 chr11 manual_curation mRNA 33063359 33071164 . + . ID=GSCOCT00038258001;Parent=GSCOCG00038258001;Name=Cc11_g17030 | |
| 75716 chr11 manual_curation polypeptide 33064262 33070575 . + . ID=GSCOCP00038258001;Dbxref=GENE3D:G3DSA:3.30.565.10,InterPro:IPR001789,InterPro:IPR003594,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR006189,InterPro:IPR009082,InterPro:IPR011006,PFAM:PF00072,PFAM:PF00512,PFAM:PF02518,PFAM:PF03924,PRINTS:PR00344,PROFILE:PS50109,PROFILE:PS50110,PROFILE:PS50839,SMART:SM00387,SMART:SM00388,SMART:SM00448,SUPERFAMILY:SSF47384,SUPERFAMILY:SSF52172,SUPERFAMILY:SSF55874,SwissProt:Q9C5U0,SwissProt:Q9C5U1,SwissProt:Q9C5U2,TAIR:AT1G27320.1,TAIR:AT2G01830.2,TAIR:AT5G35750.1,TrEMBL:B8QJH2,TrEMBL:B9RMD2,TrEMBL:D7TAZ7;Derives_from=GSCOCT00038258001;Name=Cc11_g17030;Ontology_term=CC_evidence_code:ISS,GO:0000155,GO:0000156,GO:0000160,GO:0004673,GO:0004871,GO:0005524,GO:0007165,GO:0016020,GO:0016310,GO:0018106,CC_EC_number:2.7.13.3,PRODUCT:Histidine kinase 3,CC_functional_completeness:complete,CC_gene:AHK3,CC_gene:AHK2,CC_gene:AHK4;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038258001~ Histidine kinase 3~ AHK3~ complete;original_location=join(1338956..1339327%2C1339772..1340053%2C1340301..1340470%2C1340961..1341173%2C1342102..1342288%2C1342381..1342432%2C1342534..1342763%2C1342889..1342987%2C1343629..1344761%2C1345029..1345269);owner=coffea | |
| 75717 chr11 manual_curation exon 33063359 33064633 . + . Parent=GSCOCT00038258001 | |
| 75718 chr11 manual_curation exon 33065078 33065359 . + . Parent=GSCOCT00038258001 | |
| 75719 chr11 manual_curation exon 33065607 33065776 . + . Parent=GSCOCT00038258001 | |
| 75720 chr11 manual_curation exon 33066267 33066479 . + . Parent=GSCOCT00038258001 | |
| 75721 chr11 manual_curation exon 33067408 33067594 . + . Parent=GSCOCT00038258001 | |
| 75722 chr11 manual_curation exon 33067687 33067738 . + . Parent=GSCOCT00038258001 | |
| 75723 chr11 manual_curation exon 33067840 33068069 . + . Parent=GSCOCT00038258001 | |
| 75724 chr11 manual_curation exon 33068195 33068293 . + . Parent=GSCOCT00038258001 | |
| 75725 chr11 manual_curation exon 33068935 33070067 . + . Parent=GSCOCT00038258001 | |
| 75726 chr11 manual_curation exon 33070335 33071164 . + . Parent=GSCOCT00038258001 | |
| 75727 chr11 manual_curation CDS 33064262 33064633 . + 0 Parent=GSCOCT00038258001 | |
| 75728 chr11 manual_curation CDS 33065078 33065359 . + 0 Parent=GSCOCT00038258001 | |
| 75729 chr11 manual_curation CDS 33065607 33065776 . + 0 Parent=GSCOCT00038258001 | |
| 75730 chr11 manual_curation CDS 33066267 33066479 . + 2 Parent=GSCOCT00038258001 | |
| 75731 chr11 manual_curation CDS 33067408 33067594 . + 2 Parent=GSCOCT00038258001 | |
| 75732 chr11 manual_curation CDS 33067687 33067738 . + 0 Parent=GSCOCT00038258001 | |
| 75733 chr11 manual_curation CDS 33067840 33068069 . + 1 Parent=GSCOCT00038258001 | |
| 75734 chr11 manual_curation CDS 33068195 33068293 . + 0 Parent=GSCOCT00038258001 | |
| 75735 chr11 manual_curation CDS 33068935 33070067 . + 0 Parent=GSCOCT00038258001 | |
| 75736 chr11 manual_curation CDS 33070335 33070575 . + 2 Parent=GSCOCT00038258001 | |
| 75737 chr11 manual_curation gene 33085941 33088899 . + . ID=GSCOCG00038259001;Name=Cc11_g17040 | |
| 75738 chr11 manual_curation mRNA 33085941 33088899 . + . ID=GSCOCT00038259001;Parent=GSCOCG00038259001;Name=Cc11_g17040 | |
| 75739 chr11 manual_curation polypeptide 33086594 33088582 . + . ID=GSCOCP00038259001;Dbxref=InterPro:IPR002075,InterPro:IPR018222,PFAM:PF02136,PROFILE:PS50177,SwissProt:Q75AA5,SwissProt:Q9C7F5,SwissProt:Q9XJ54,TAIR:AT1G11570.2,TAIR:AT1G27310.1,TAIR:AT1G27970.2,TrEMBL:A5BM29,TrEMBL:A9PBT2,TrEMBL:B9RMD1;Derives_from=GSCOCT00038259001;Name=Cc11_g17040;Ontology_term=CC_evidence_code:ISS,GO:0005622,GO:0006810,CC_EC_number:missing_EC_number,PRODUCT:Nuclear transport factor 2,CC_functional_completeness:complete,CC_gene:NTF2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038259001~ Nuclear transport factor 2~ NTF2~ complete;original_location=join(1361288..1361587%2C1363202..1363276);owner=coffea | |
| 75740 chr11 manual_curation exon 33085941 33086893 . + . Parent=GSCOCT00038259001 | |
| 75741 chr11 manual_curation exon 33088508 33088899 . + . Parent=GSCOCT00038259001 | |
| 75742 chr11 manual_curation CDS 33086594 33086893 . + 0 Parent=GSCOCT00038259001 | |
| 75743 chr11 manual_curation CDS 33088508 33088582 . + 0 Parent=GSCOCT00038259001 | |
| 75744 chr11 manual_curation gene 33089092 33090041 . - . ID=GSCOCG00038260001;Name=Cc11_g17050 | |
| 75745 chr11 manual_curation mRNA 33089092 33090041 . - . ID=GSCOCT00038260001;Parent=GSCOCG00038260001;Name=Cc11_g17050 | |
| 75746 chr11 manual_curation polypeptide 33089092 33090041 . - . ID=GSCOCP00038260001;Dbxref=TAIR:AT1G27300.1,TrEMBL:B9GZP0,TrEMBL:B9RMD0,TrEMBL:D7TAZ8;Derives_from=GSCOCT00038260001;Name=Cc11_g17050;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B Has 54 Blast hits to 54 proteins in 19 species,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038260001~ Putative unknown protein%3B Has 54 Blast hits to 54 proteins in 19 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 11%3B Fungi - 6%3B Plants - 34%3B Viruses - 0%3B Other Eukaryotes - 3 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(1364547..1364735%2C1363786..1364274));owner=coffea | |
| 75747 chr11 manual_curation exon 33089092 33089580 . - . Parent=GSCOCT00038260001 | |
| 75748 chr11 manual_curation exon 33089853 33090041 . - . Parent=GSCOCT00038260001 | |
| 75749 chr11 manual_curation CDS 33089092 33089580 . - 0 Parent=GSCOCT00038260001 | |
| 75750 chr11 manual_curation CDS 33089853 33090041 . - 0 Parent=GSCOCT00038260001 | |
| 75751 chr11 manual_curation gene 33090822 33101196 . - . ID=GSCOCG00038262001;Name=Cc11_g17060 | |
| 75752 chr11 manual_curation mRNA 33090822 33101196 . - . ID=GSCOCT00038262001;Parent=GSCOCG00038262001;Name=Cc11_g17060 | |
| 75753 chr11 manual_curation polypeptide 33091158 33100768 . - . ID=GSCOCP00038262001;Dbxref=GENE3D:G3DSA:1.25.40.20,InterPro:IPR000048,InterPro:IPR002110,InterPro:IPR002909,InterPro:IPR005559,InterPro:IPR014756,InterPro:IPR020683,PFAM:PF00023,PFAM:PF00612,PFAM:PF01833,PFAM:PF03859,PROFILE:PS50088,PROFILE:PS50096,PROFILE:PS50297,PROFILE:PS51437,SMART:SM00015,SMART:SM00248,SUPERFAMILY:SSF48403,SUPERFAMILY:SSF81296,SwissProt:Q6NPP4,SwissProt:Q9FY74,SwissProt:Q9FYG2,TAIR:AT1G67310.1,TAIR:AT5G09410.3,TAIR:AT5G64220.1,TrEMBL:D7TB03,TrEMBL:H8ZRY3,TrEMBL:I1KS32;Derives_from=GSCOCT00038262001;Name=Cc11_g17060;Ontology_term=CC_evidence_code:ISS,GO:0005516,GO:0005634,GO:0030528,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:Calmodulin-binding transcription activator 4,CC_functional_completeness:complete,CC_gene:CMTA4,CC_gene:CMTA1,CC_gene:CMTA2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038262001~ Calmodulin-binding transcription activator 4~ CMTA4~ complete;original_location=complement(join(1375450..1375462%2C1374510..1374635%2C1374281..1374396%2C1373434..1373522%2C1373156..1373201%2C1372240..1372642%2C1371484..1371653%2C1371163..1371253%2C1370847..1371070%2C1368695..1369374%2C1366989..1367580%2C1366218..1366508%2C1365852..1365941));owner=coffea | |
| 75754 chr11 manual_curation exon 33090822 33091247 . - . Parent=GSCOCT00038262001 | |
| 75755 chr11 manual_curation exon 33091524 33091814 . - . Parent=GSCOCT00038262001 | |
| 75756 chr11 manual_curation exon 33092295 33092886 . - . Parent=GSCOCT00038262001 | |
| 75757 chr11 manual_curation exon 33094001 33094680 . - . Parent=GSCOCT00038262001 | |
| 75758 chr11 manual_curation exon 33096153 33096376 . - . Parent=GSCOCT00038262001 | |
| 75759 chr11 manual_curation exon 33096469 33096559 . - . Parent=GSCOCT00038262001 | |
| 75760 chr11 manual_curation exon 33096790 33096959 . - . Parent=GSCOCT00038262001 | |
| 75761 chr11 manual_curation exon 33097546 33097948 . - . Parent=GSCOCT00038262001 | |
| 75762 chr11 manual_curation exon 33098462 33098507 . - . Parent=GSCOCT00038262001 | |
| 75763 chr11 manual_curation exon 33098740 33098828 . - . Parent=GSCOCT00038262001 | |
| 75764 chr11 manual_curation exon 33099587 33099702 . - . Parent=GSCOCT00038262001 | |
| 75765 chr11 manual_curation exon 33099816 33099941 . - . Parent=GSCOCT00038262001 | |
| 75766 chr11 manual_curation exon 33100756 33101196 . - . Parent=GSCOCT00038262001 | |
| 75767 chr11 manual_curation CDS 33091158 33091247 . - 0 Parent=GSCOCT00038262001 | |
| 75768 chr11 manual_curation CDS 33091524 33091814 . - 0 Parent=GSCOCT00038262001 | |
| 75769 chr11 manual_curation CDS 33092295 33092886 . - 2 Parent=GSCOCT00038262001 | |
| 75770 chr11 manual_curation CDS 33094001 33094680 . - 0 Parent=GSCOCT00038262001 | |
| 75771 chr11 manual_curation CDS 33096153 33096376 . - 1 Parent=GSCOCT00038262001 | |
| 75772 chr11 manual_curation CDS 33096469 33096559 . - 0 Parent=GSCOCT00038262001 | |
| 75773 chr11 manual_curation CDS 33096790 33096959 . - 1 Parent=GSCOCT00038262001 | |
| 75774 chr11 manual_curation CDS 33097546 33097948 . - 0 Parent=GSCOCT00038262001 | |
| 75775 chr11 manual_curation CDS 33098462 33098507 . - 2 Parent=GSCOCT00038262001 | |
| 75776 chr11 manual_curation CDS 33098740 33098828 . - 0 Parent=GSCOCT00038262001 | |
| 75777 chr11 manual_curation CDS 33099587 33099702 . - 1 Parent=GSCOCT00038262001 | |
| 75778 chr11 manual_curation CDS 33099816 33099941 . - 1 Parent=GSCOCT00038262001 | |
| 75779 chr11 manual_curation CDS 33100756 33100768 . - 0 Parent=GSCOCT00038262001 | |
| 75780 chr11 manual_curation gene 33107418 33108235 . + . ID=GSCOCG00038263001;Name=Cc11_g17070 | |
| 75781 chr11 manual_curation mRNA 33107418 33108235 . + . ID=GSCOCT00038263001;Parent=GSCOCG00038263001;Name=Cc11_g17070 | |
| 75782 chr11 manual_curation polypeptide 33107637 33107846 . + . ID=GSCOCP00038263001;Dbxref=InterPro:IPR021775,PFAM:PF11820,TAIR:AT3G48660.1,TAIR:AT5G08391.1,TAIR:AT5G63500.1,TrEMBL:B9GMM1,TrEMBL:B9GZN8,TrEMBL:I1K3N0;Derives_from=GSCOCT00038263001;Name=Cc11_g17070;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF 3339),CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038263001~ Protein of unknown function (DUF 3339)~ unknown_gene~ fragment;original_location=1382331..1382540;owner=coffea | |
| 75783 chr11 manual_curation exon 33107418 33108235 . + . Parent=GSCOCT00038263001 | |
| 75784 chr11 manual_curation CDS 33107637 33107846 . + 0 Parent=GSCOCT00038263001 | |
| 75785 chr11 manual_curation gene 33112159 33113628 . + . ID=GSCOCG00038264001;Name=Cc11_g17080 | |
| 75786 chr11 manual_curation mRNA 33112159 33113628 . + . ID=GSCOCT00038264001;Parent=GSCOCG00038264001;Name=Cc11_g17080 | |
| 75787 chr11 manual_curation polypeptide 33112388 33112597 . + . ID=GSCOCP00038264001;Dbxref=InterPro:IPR021775,PFAM:PF11820,TAIR:AT3G48660.1,TAIR:AT5G08391.1,TAIR:AT5G63500.1,TrEMBL:B9GZN7,TrEMBL:B9RMC7,TrEMBL:I1MYD6;Derives_from=GSCOCT00038264001;Name=Cc11_g17080;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF 3339),CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038264001~ Protein of unknown function (DUF 3339)~ unknown_gene~ fragment;original_location=1387082..1387291;owner=coffea | |
| 75788 chr11 manual_curation exon 33112159 33113628 . + . Parent=GSCOCT00038264001 | |
| 75789 chr11 manual_curation CDS 33112388 33112597 . + 0 Parent=GSCOCT00038264001 | |
| 75790 chr11 manual_curation gene 33113731 33116528 . - . ID=GSCOCG00038265001;Name=Cc11_g17090 | |
| 75791 chr11 manual_curation mRNA 33113731 33116528 . - . ID=GSCOCT00038265001;Parent=GSCOCG00038265001;Name=Cc11_g17090 | |
| 75792 chr11 manual_curation polypeptide 33115072 33116121 . - . ID=GSCOCP00038265001;Dbxref=TAIR:AT1G27290.1,TrEMBL:B5TV75,TrEMBL:F6HGC2,TrEMBL:I1LN58;Derives_from=GSCOCT00038265001;Name=Cc11_g17090;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B Has 44 Blast hits to 44 proteins in 12 species,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038265001~ unknown protein%3B Has 44 Blast hits to 44 proteins in 12 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 44%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(1390410..1390815%2C1389766..1389824));owner=coffea | |
| 75793 chr11 manual_curation exon 33113731 33115130 . - . Parent=GSCOCT00038265001 | |
| 75794 chr11 manual_curation exon 33115716 33116528 . - . Parent=GSCOCT00038265001 | |
| 75795 chr11 manual_curation CDS 33115072 33115130 . - 1 Parent=GSCOCT00038265001 | |
| 75796 chr11 manual_curation CDS 33115716 33116121 . - 0 Parent=GSCOCT00038265001 | |
| 75797 chr11 manual_curation gene 33131783 33146857 . - . ID=GSCOCG00038267001;Name=Cc11_g17100 | |
| 75798 chr11 manual_curation mRNA 33131783 33146857 . - . ID=GSCOCT00038267001;Parent=GSCOCG00038267001;Name=Cc11_g17100 | |
| 75799 chr11 manual_curation polypeptide 33132054 33146554 . - . ID=GSCOCP00038267001;Dbxref=InterPro:IPR002100,InterPro:IPR002487,PFAM:PF00319,PFAM:PF01486,PRINTS:PR00404,PROFILE:PS50066,PROFILE:PS51297,PROSITE:PS00350,SMART:SM00432,SUPERFAMILY:SSF55455,SwissProt:P0C5B0,SwissProt:Q0J466,SwissProt:Q9FPN7,TAIR:AT1G77080.4,TAIR:AT5G65050.3,TAIR:AT5G65060.1,TrEMBL:E9JPX8,TrEMBL:F1SY11,TrEMBL:Q6UGQ6;Derives_from=GSCOCT00038267001;Name=Cc11_g17100;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0005634,GO:0043565,CC_EC_number:missing_EC_number,PRODUCT:Putative Agamous-like MADS-box protein AGL31,CC_functional_completeness:complete,CC_gene:AGL31,CC_gene:MADS7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038267001~ Putative Agamous-like MADS-box protein AGL31~ AGL31~ complete;original_location=complement(join(1421064..1421248%2C1409463..1409538%2C1408820..1408873%2C1408645..1408773%2C1407544..1407585%2C1406951..1406992%2C1406748..1406861));owner=coffea | |
| 75800 chr11 manual_curation exon 33131783 33132167 . - . Parent=GSCOCT00038267001 | |
| 75801 chr11 manual_curation exon 33132257 33132298 . - . Parent=GSCOCT00038267001 | |
| 75802 chr11 manual_curation exon 33132850 33132891 . - . Parent=GSCOCT00038267001 | |
| 75803 chr11 manual_curation exon 33133951 33134079 . - . Parent=GSCOCT00038267001 | |
| 75804 chr11 manual_curation exon 33134126 33134179 . - . Parent=GSCOCT00038267001 | |
| 75805 chr11 manual_curation exon 33134769 33134844 . - . Parent=GSCOCT00038267001 | |
| 75806 chr11 manual_curation exon 33146370 33146857 . - . Parent=GSCOCT00038267001 | |
| 75807 chr11 manual_curation CDS 33132054 33132167 . - 0 Parent=GSCOCT00038267001 | |
| 75808 chr11 manual_curation CDS 33132257 33132298 . - 0 Parent=GSCOCT00038267001 | |
| 75809 chr11 manual_curation CDS 33132850 33132891 . - 0 Parent=GSCOCT00038267001 | |
| 75810 chr11 manual_curation CDS 33133951 33134079 . - 0 Parent=GSCOCT00038267001 | |
| 75811 chr11 manual_curation CDS 33134126 33134179 . - 0 Parent=GSCOCT00038267001 | |
| 75812 chr11 manual_curation CDS 33134769 33134844 . - 2 Parent=GSCOCT00038267001 | |
| 75813 chr11 manual_curation CDS 33146370 33146554 . - 0 Parent=GSCOCT00038267001 | |
| 75814 chr11 manual_curation gene 33155343 33160623 . - . ID=GSCOCG00038268001;Name=Cc11_g17110 | |
| 75815 chr11 manual_curation mRNA 33155343 33160623 . - . ID=GSCOCT00038268001;Parent=GSCOCG00038268001;Name=Cc11_g17110 | |
| 75816 chr11 manual_curation polypeptide 33155556 33160349 . - . ID=GSCOCP00038268001;Dbxref=InterPro:IPR002100,InterPro:IPR002487,PFAM:PF00319,PFAM:PF01486,PRINTS:PR00404,PROFILE:PS50066,PROFILE:PS51297,PROSITE:PS00350,SMART:SM00432,SUPERFAMILY:SSF55455,SwissProt:O22456,SwissProt:O65874,SwissProt:Q03489,TAIR:AT1G24260.2,TAIR:AT3G02310.1,TAIR:AT5G15800.2,TrEMBL:E9JPX2,TrEMBL:Q7Y039,TrEMBL:Q9XHR9;Derives_from=GSCOCT00038268001;Name=Cc11_g17110;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0005634,GO:0043565,CC_EC_number:missing_EC_number,PRODUCT:Agamous-like MADS-box protein AGL9 homolog,CC_functional_completeness:complete,CC_gene:FBP2,CC_gene:MTF1,CC_gene:SEP3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038268001~ Agamous-like MADS-box protein AGL9 homolog~ FBP2~ complete;original_location=complement(join(1434859..1435043%2C1432881..1432959%2C1431871..1431938%2C1431681..1431780%2C1430969..1431010%2C1430835..1430876%2C1430559..1430692%2C1430250..1430325));owner=coffea | |
| 75817 chr11 manual_curation exon 33155343 33155631 . - . Parent=GSCOCT00038268001 | |
| 75818 chr11 manual_curation exon 33155865 33155998 . - . Parent=GSCOCT00038268001 | |
| 75819 chr11 manual_curation exon 33156141 33156182 . - . Parent=GSCOCT00038268001 | |
| 75820 chr11 manual_curation exon 33156275 33156316 . - . Parent=GSCOCT00038268001 | |
| 75821 chr11 manual_curation exon 33156987 33157086 . - . Parent=GSCOCT00038268001 | |
| 75822 chr11 manual_curation exon 33157177 33157244 . - . Parent=GSCOCT00038268001 | |
| 75823 chr11 manual_curation exon 33158187 33158265 . - . Parent=GSCOCT00038268001 | |
| 75824 chr11 manual_curation exon 33160165 33160623 . - . Parent=GSCOCT00038268001 | |
| 75825 chr11 manual_curation CDS 33155556 33155631 . - 2 Parent=GSCOCT00038268001 | |
| 75826 chr11 manual_curation CDS 33155865 33155998 . - 0 Parent=GSCOCT00038268001 | |
| 75827 chr11 manual_curation CDS 33156141 33156182 . - 0 Parent=GSCOCT00038268001 | |
| 75828 chr11 manual_curation CDS 33156275 33156316 . - 0 Parent=GSCOCT00038268001 | |
| 75829 chr11 manual_curation CDS 33156987 33157086 . - 2 Parent=GSCOCT00038268001 | |
| 75830 chr11 manual_curation CDS 33157177 33157244 . - 0 Parent=GSCOCT00038268001 | |
| 75831 chr11 manual_curation CDS 33158187 33158265 . - 2 Parent=GSCOCT00038268001 | |
| 75832 chr11 manual_curation CDS 33160165 33160349 . - 0 Parent=GSCOCT00038268001 | |
| 75833 chr11 manual_curation gene 33161494 33162118 . + . ID=GSCOCG00038269001;Name=Cc11_g17120 | |
| 75834 chr11 manual_curation mRNA 33161494 33162118 . + . ID=GSCOCT00038269001;Parent=GSCOCG00038269001;Name=Cc11_g17120 | |
| 75835 chr11 manual_curation polypeptide 33161494 33162118 . + . ID=GSCOCP00038269001;Dbxref=InterPro:IPR001128,PANTHER:PTHR19383;Derives_from=GSCOCT00038269001;Name=Cc11_g17120;Ontology_term=CC_evidence_code:ISS,GO:0004497,GO:0005506,GO:0009055,GO:0020037,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038269001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=join(1436188..1436243%2C1436319..1436400%2C1436801..1436812);owner=coffea | |
| 75836 chr11 manual_curation exon 33161494 33161549 . + . Parent=GSCOCT00038269001 | |
| 75837 chr11 manual_curation exon 33161625 33161706 . + . Parent=GSCOCT00038269001 | |
| 75838 chr11 manual_curation exon 33162107 33162118 . + . Parent=GSCOCT00038269001 | |
| 75839 chr11 manual_curation CDS 33161494 33161549 . + 0 Parent=GSCOCT00038269001 | |
| 75840 chr11 manual_curation CDS 33161625 33161706 . + 2 Parent=GSCOCT00038269001 | |
| 75841 chr11 manual_curation CDS 33162107 33162118 . + 0 Parent=GSCOCT00038269001 | |
| 75842 chr11 manual_curation gene 33177135 33181590 . - . ID=GSCOCG00038270001;Name=Cc11_g17130 | |
| 75843 chr11 manual_curation mRNA 33177135 33181590 . - . ID=GSCOCT00038270001;Parent=GSCOCG00038270001;Name=Cc11_g17130 | |
| 75844 chr11 manual_curation polypeptide 33177135 33179561 . - . ID=GSCOCP00038270001;Dbxref=GENE3D:G3DSA:4.10.1100.10,InterPro:IPR004333,PFAM:PF03110,PROFILE:PS51141,SUPERFAMILY:SSF103612,SwissProt:P0DI11,SwissProt:Q0J0K1,SwissProt:Q6YZE8,TAIR:AT1G27370.1,TAIR:AT5G50570.1,TAIR:AT5G50670.1,TrEMBL:A5BHV4,TrEMBL:B9RMC2,TrEMBL:F6GSW2;Derives_from=GSCOCT00038270001;Name=Cc11_g17130;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0005634,CC_EC_number:missing_EC_number,PRODUCT:Putative Squamosa promoter-binding-like protein 16,CC_functional_completeness:fragment,CC_gene:SPL16,CC_gene:SPL18,CC_gene:SPL13B;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038270001~ Putative Squamosa promoter-binding-like protein 16~ SPL16~ fragment;original_location=complement(join(1454044..1454255%2C1452608..1452741%2C1451829..1452454));owner=coffea | |
| 75845 chr11 manual_curation exon 33181521 33181590 . - . Parent=GSCOCT00038270001 | |
| 75846 chr11 manual_curation exon 33177135 33177760 . - . Parent=GSCOCT00038270001 | |
| 75847 chr11 manual_curation exon 33177914 33178047 . - . Parent=GSCOCT00038270001 | |
| 75848 chr11 manual_curation exon 33179350 33179867 . - . Parent=GSCOCT00038270001 | |
| 75849 chr11 manual_curation CDS 33177135 33177760 . - 1 Parent=GSCOCT00038270001 | |
| 75850 chr11 manual_curation CDS 33177914 33178047 . - 2 Parent=GSCOCT00038270001 | |
| 75851 chr11 manual_curation CDS 33179350 33179561 . - 0 Parent=GSCOCT00038270001 | |
| 75852 chr11 manual_curation gene 33182939 33183981 . + . ID=GSCOCG00038271001;Name=Cc11_g17140 | |
| 75853 chr11 manual_curation mRNA 33182939 33183981 . + . ID=GSCOCT00038271001;Parent=GSCOCG00038271001;Name=Cc11_g17140 | |
| 75854 chr11 manual_curation polypeptide 33182939 33183169 . + . ID=GSCOCP00038271001;Derives_from=GSCOCT00038271001;Name=Cc11_g17140;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038271001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1457633..1457863;owner=coffea | |
| 75855 chr11 manual_curation exon 33182939 33183981 . + . Parent=GSCOCT00038271001 | |
| 75856 chr11 manual_curation CDS 33182939 33183169 . + 0 Parent=GSCOCT00038271001 | |
| 75857 chr11 manual_curation gene 33186611 33193759 . - . ID=GSCOCG00038273001;Name=Cc11_g17150 | |
| 75858 chr11 manual_curation mRNA 33186611 33193759 . - . ID=GSCOCT00038273001;Parent=GSCOCG00038273001;Name=Cc11_g17150 | |
| 75859 chr11 manual_curation polypeptide 33187588 33193759 . - . ID=GSCOCP00038273001;Dbxref=InterPro:IPR007238,InterPro:IPR016558,PANTHER:PTHR10537,PFAM:PF04104,PIR:PIRSF009449,SwissProt:P33610,SwissProt:P49643,SwissProt:Q84WJ2,TAIR:AT1G67320.3,TrEMBL:B9GZN0,TrEMBL:B9RMC0,TrEMBL:D7TS99;Derives_from=GSCOCT00038273001;Name=Cc11_g17150;Ontology_term=CC_evidence_code:ISS,GO:0003896,CC_EC_number:missing_EC_number,PRODUCT:Probable DNA primase large subunit,CC_functional_completeness:complete,CC_gene:At1g67320,CC_gene:Prim2,CC_gene:PRIM2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038273001~ Probable DNA primase large subunit~ At1g67320~ complete;original_location=complement(join(1468318..1468453%2C1467849..1467910%2C1467637..1467740%2C1467447..1467528%2C1467262..1467321%2C1467016..1467073%2C1466868..1466887%2C1466290..1466373%2C1466140..1466204%2C1465521..1465569%2C1465392..1465439%2C1465212..1465301%2C1465010..1465069%2C1464765..1464824%2C1464316..1464390%2C1463748..1463833%2C1463293..1463386%2C1463089..1463196%2C1462282..1462302));owner=coffea | |
| 75860 chr11 manual_curation exon 33186611 33187608 . - . Parent=GSCOCT00038273001 | |
| 75861 chr11 manual_curation exon 33188395 33188502 . - . Parent=GSCOCT00038273001 | |
| 75862 chr11 manual_curation exon 33188599 33188692 . - . Parent=GSCOCT00038273001 | |
| 75863 chr11 manual_curation exon 33189054 33189139 . - . Parent=GSCOCT00038273001 | |
| 75864 chr11 manual_curation exon 33189622 33189696 . - . Parent=GSCOCT00038273001 | |
| 75865 chr11 manual_curation exon 33190071 33190130 . - . Parent=GSCOCT00038273001 | |
| 75866 chr11 manual_curation exon 33190316 33190375 . - . Parent=GSCOCT00038273001 | |
| 75867 chr11 manual_curation exon 33190518 33190607 . - . Parent=GSCOCT00038273001 | |
| 75868 chr11 manual_curation exon 33190698 33190745 . - . Parent=GSCOCT00038273001 | |
| 75869 chr11 manual_curation exon 33190827 33190875 . - . Parent=GSCOCT00038273001 | |
| 75870 chr11 manual_curation exon 33191446 33191510 . - . Parent=GSCOCT00038273001 | |
| 75871 chr11 manual_curation exon 33191596 33191679 . - . Parent=GSCOCT00038273001 | |
| 75872 chr11 manual_curation exon 33192174 33192193 . - . Parent=GSCOCT00038273001 | |
| 75873 chr11 manual_curation exon 33192322 33192379 . - . Parent=GSCOCT00038273001 | |
| 75874 chr11 manual_curation exon 33192568 33192627 . - . Parent=GSCOCT00038273001 | |
| 75875 chr11 manual_curation exon 33192753 33192834 . - . Parent=GSCOCT00038273001 | |
| 75876 chr11 manual_curation exon 33192943 33193046 . - . Parent=GSCOCT00038273001 | |
| 75877 chr11 manual_curation exon 33193155 33193216 . - . Parent=GSCOCT00038273001 | |
| 75878 chr11 manual_curation exon 33193624 33193759 . - . Parent=GSCOCT00038273001 | |
| 75879 chr11 manual_curation CDS 33187588 33187608 . - 0 Parent=GSCOCT00038273001 | |
| 75880 chr11 manual_curation CDS 33188395 33188502 . - 0 Parent=GSCOCT00038273001 | |
| 75881 chr11 manual_curation CDS 33188599 33188692 . - 2 Parent=GSCOCT00038273001 | |
| 75882 chr11 manual_curation CDS 33189054 33189139 . - 0 Parent=GSCOCT00038273001 | |
| 75883 chr11 manual_curation CDS 33189622 33189696 . - 0 Parent=GSCOCT00038273001 | |
| 75884 chr11 manual_curation CDS 33190071 33190130 . - 0 Parent=GSCOCT00038273001 | |
| 75885 chr11 manual_curation CDS 33190316 33190375 . - 0 Parent=GSCOCT00038273001 | |
| 75886 chr11 manual_curation CDS 33190518 33190607 . - 0 Parent=GSCOCT00038273001 | |
| 75887 chr11 manual_curation CDS 33190698 33190745 . - 0 Parent=GSCOCT00038273001 | |
| 75888 chr11 manual_curation CDS 33190827 33190875 . - 2 Parent=GSCOCT00038273001 | |
| 75889 chr11 manual_curation CDS 33191446 33191510 . - 0 Parent=GSCOCT00038273001 | |
| 75890 chr11 manual_curation CDS 33191596 33191679 . - 0 Parent=GSCOCT00038273001 | |
| 75891 chr11 manual_curation CDS 33192174 33192193 . - 1 Parent=GSCOCT00038273001 | |
| 75892 chr11 manual_curation CDS 33192322 33192379 . - 0 Parent=GSCOCT00038273001 | |
| 75893 chr11 manual_curation CDS 33192568 33192627 . - 0 Parent=GSCOCT00038273001 | |
| 75894 chr11 manual_curation CDS 33192753 33192834 . - 2 Parent=GSCOCT00038273001 | |
| 75895 chr11 manual_curation CDS 33192943 33193046 . - 0 Parent=GSCOCT00038273001 | |
| 75896 chr11 manual_curation CDS 33193155 33193216 . - 1 Parent=GSCOCT00038273001 | |
| 75897 chr11 manual_curation CDS 33193624 33193759 . - 0 Parent=GSCOCT00038273001 | |
| 75898 chr11 manual_curation gene 33195083 33201301 . - . ID=GSCOCG00038275001;Name=Cc11_g17160 | |
| 75899 chr11 manual_curation mRNA 33195083 33201301 . - . ID=GSCOCT00038275001;Parent=GSCOCG00038275001;Name=Cc11_g17160 | |
| 75900 chr11 manual_curation polypeptide 33195083 33200972 . - . ID=GSCOCP00038275001;Dbxref=InterPro:IPR012458,PFAM:PF07889,TAIR:AT1G04960.2,TAIR:AT1G24265.3,TAIR:AT1G24267.2,TrEMBL:D3Y3E8,TrEMBL:F2WZH0,TrEMBL:F6HGC6;Derives_from=GSCOCT00038275001;Name=Cc11_g17160;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Protein of unknown function (DUF1664),CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038275001~ Protein of unknown function (DUF1664)~ unknown_gene~ complete;original_location=complement(join(1475624..1475666%2C1474894..1474967%2C1474694..1474771%2C1473789..1473867%2C1473065..1473129%2C1472553..1472654%2C1471612..1471701%2C1471437..1471511%2C1471311..1471343%2C1471083..1471211%2C1470987..1471046%2C1470469..1470537%2C1470053..1470091%2C1469777..1469962));owner=coffea | |
| 75901 chr11 manual_curation exon 33195083 33195268 . - . Parent=GSCOCT00038275001 | |
| 75902 chr11 manual_curation exon 33195359 33195397 . - . Parent=GSCOCT00038275001 | |
| 75903 chr11 manual_curation exon 33195775 33195843 . - . Parent=GSCOCT00038275001 | |
| 75904 chr11 manual_curation exon 33196293 33196352 . - . Parent=GSCOCT00038275001 | |
| 75905 chr11 manual_curation exon 33196389 33196517 . - . Parent=GSCOCT00038275001 | |
| 75906 chr11 manual_curation exon 33196617 33196649 . - . Parent=GSCOCT00038275001 | |
| 75907 chr11 manual_curation exon 33196743 33196817 . - . Parent=GSCOCT00038275001 | |
| 75908 chr11 manual_curation exon 33196918 33197007 . - . Parent=GSCOCT00038275001 | |
| 75909 chr11 manual_curation exon 33197859 33197960 . - . Parent=GSCOCT00038275001 | |
| 75910 chr11 manual_curation exon 33198371 33198435 . - . Parent=GSCOCT00038275001 | |
| 75911 chr11 manual_curation exon 33199095 33199173 . - . Parent=GSCOCT00038275001 | |
| 75912 chr11 manual_curation exon 33200000 33200077 . - . Parent=GSCOCT00038275001 | |
| 75913 chr11 manual_curation exon 33200200 33200273 . - . Parent=GSCOCT00038275001 | |
| 75914 chr11 manual_curation exon 33200930 33201301 . - . Parent=GSCOCT00038275001 | |
| 75915 chr11 manual_curation CDS 33195083 33195268 . - 0 Parent=GSCOCT00038275001 | |
| 75916 chr11 manual_curation CDS 33195359 33195397 . - 0 Parent=GSCOCT00038275001 | |
| 75917 chr11 manual_curation CDS 33195775 33195843 . - 0 Parent=GSCOCT00038275001 | |
| 75918 chr11 manual_curation CDS 33196293 33196352 . - 0 Parent=GSCOCT00038275001 | |
| 75919 chr11 manual_curation CDS 33196389 33196517 . - 0 Parent=GSCOCT00038275001 | |
| 75920 chr11 manual_curation CDS 33196617 33196649 . - 0 Parent=GSCOCT00038275001 | |
| 75921 chr11 manual_curation CDS 33196743 33196817 . - 0 Parent=GSCOCT00038275001 | |
| 75922 chr11 manual_curation CDS 33196918 33197007 . - 0 Parent=GSCOCT00038275001 | |
| 75923 chr11 manual_curation CDS 33197859 33197960 . - 0 Parent=GSCOCT00038275001 | |
| 75924 chr11 manual_curation CDS 33198371 33198435 . - 1 Parent=GSCOCT00038275001 | |
| 75925 chr11 manual_curation CDS 33199095 33199173 . - 0 Parent=GSCOCT00038275001 | |
| 75926 chr11 manual_curation CDS 33200000 33200077 . - 0 Parent=GSCOCT00038275001 | |
| 75927 chr11 manual_curation CDS 33200200 33200273 . - 1 Parent=GSCOCT00038275001 | |
| 75928 chr11 manual_curation CDS 33200930 33200972 . - 0 Parent=GSCOCT00038275001 | |
| 75929 chr11 manual_curation gene 33207735 33211403 . - . ID=GSCOCG00038276001;Name=Cc11_g17170 | |
| 75930 chr11 manual_curation mRNA 33207735 33211403 . - . ID=GSCOCT00038276001;Parent=GSCOCG00038276001;Name=Cc11_g17170 | |
| 75931 chr11 manual_curation polypeptide 33207872 33211287 . - . ID=GSCOCP00038276001;Dbxref=InterPro:IPR003657,PFAM:PF03106,PROFILE:PS50811,SMART:SM00774,SwissProt:Q9FFS3,SwissProt:Q9FYA2,SwissProt:Q9S763,TAIR:AT3G01970.1,TAIR:AT5G13080.1,TAIR:AT5G41570.1,TrEMBL:B9GMM9,TrEMBL:C7S811,TrEMBL:D9ZJF3;Derives_from=GSCOCT00038276001;Name=Cc11_g17170;Ontology_term=CC_evidence_code:ISS,GO:0003700,GO:0043565,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:WRKY DNA binding protein,CC_functional_completeness:complete,CC_gene:WRKY75,CC_gene:WRKY45,CC_gene:WRKY24;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038276001~ WRKY DNA binding protein~ WRKY75~ complete;original_location=complement(join(1485587..1485981%2C1482566..1482746));owner=coffea | |
| 75932 chr11 manual_curation exon 33207735 33208052 . - . Parent=GSCOCT00038276001 | |
| 75933 chr11 manual_curation exon 33210893 33211403 . - . Parent=GSCOCT00038276001 | |
| 75934 chr11 manual_curation CDS 33207872 33208052 . - 2 Parent=GSCOCT00038276001 | |
| 75935 chr11 manual_curation CDS 33210893 33211287 . - 0 Parent=GSCOCT00038276001 | |
| 75936 chr11 manual_curation gene 33217258 33223715 . + . ID=GSCOCG00038277001;Name=Cc11_g17180 | |
| 75937 chr11 manual_curation mRNA 33217258 33223715 . + . ID=GSCOCT00038277001;Parent=GSCOCG00038277001;Name=Cc11_g17180 | |
| 75938 chr11 manual_curation polypeptide 33217374 33223526 . + . ID=GSCOCP00038277001;Dbxref=GENE3D:G3DSA:3.40.640.10,InterPro:IPR002129,InterPro:IPR015421,InterPro:IPR015424,PANTHER:PTHR11999,PFAM:PF00282,SUPERFAMILY:SSF53383,SwissProt:Q52RG7,SwissProt:Q54RV9,SwissProt:Q9C509,TAIR:AT1G27980.1,TAIR:AT3G17760.1,TAIR:AT5G17330.1,TrEMBL:F6HGC7,TrEMBL:G7KUR3,TrEMBL:I1JDU3;Derives_from=GSCOCT00038277001;Name=Cc11_g17180;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0016831,GO:0019752,GO:0030170,CC_EC_number:4.1.2.27,PRODUCT:Sphingosine-1-phosphate lyase,CC_functional_completeness:complete,CC_gene:At1g27980,CC_gene:SPL,CC_gene:sglA;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038277001~ Sphingosine-1-phosphate lyase~ At1g27980~ complete;original_location=join(1492068..1492273%2C1492401..1492446%2C1493139..1493290%2C1493405..1493464%2C1493754..1493978%2C1494061..1494202%2C1494611..1494702%2C1495441..1495567%2C1496586..1496601%2C1496883..1496990%2C1497086..1497140%2C1497219..1497365%2C1497606..1497684%2C1498098..1498220);owner=coffea | |
| 75939 chr11 manual_curation exon 33217258 33217579 . + . Parent=GSCOCT00038277001 | |
| 75940 chr11 manual_curation exon 33217707 33217752 . + . Parent=GSCOCT00038277001 | |
| 75941 chr11 manual_curation exon 33218445 33218596 . + . Parent=GSCOCT00038277001 | |
| 75942 chr11 manual_curation exon 33218711 33218770 . + . Parent=GSCOCT00038277001 | |
| 75943 chr11 manual_curation exon 33219060 33219284 . + . Parent=GSCOCT00038277001 | |
| 75944 chr11 manual_curation exon 33219367 33219508 . + . Parent=GSCOCT00038277001 | |
| 75945 chr11 manual_curation exon 33219917 33220008 . + . Parent=GSCOCT00038277001 | |
| 75946 chr11 manual_curation exon 33220747 33220873 . + . Parent=GSCOCT00038277001 | |
| 75947 chr11 manual_curation exon 33221892 33221907 . + . Parent=GSCOCT00038277001 | |
| 75948 chr11 manual_curation exon 33222189 33222296 . + . Parent=GSCOCT00038277001 | |
| 75949 chr11 manual_curation exon 33222392 33222446 . + . Parent=GSCOCT00038277001 | |
| 75950 chr11 manual_curation exon 33222525 33222671 . + . Parent=GSCOCT00038277001 | |
| 75951 chr11 manual_curation exon 33222912 33222990 . + . Parent=GSCOCT00038277001 | |
| 75952 chr11 manual_curation exon 33223404 33223715 . + . Parent=GSCOCT00038277001 | |
| 75953 chr11 manual_curation CDS 33217374 33217579 . + 0 Parent=GSCOCT00038277001 | |
| 75954 chr11 manual_curation CDS 33217707 33217752 . + 2 Parent=GSCOCT00038277001 | |
| 75955 chr11 manual_curation CDS 33218445 33218596 . + 0 Parent=GSCOCT00038277001 | |
| 75956 chr11 manual_curation CDS 33218711 33218770 . + 2 Parent=GSCOCT00038277001 | |
| 75957 chr11 manual_curation CDS 33219060 33219284 . + 2 Parent=GSCOCT00038277001 | |
| 75958 chr11 manual_curation CDS 33219367 33219508 . + 2 Parent=GSCOCT00038277001 | |
| 75959 chr11 manual_curation CDS 33219917 33220008 . + 0 Parent=GSCOCT00038277001 | |
| 75960 chr11 manual_curation CDS 33220747 33220873 . + 2 Parent=GSCOCT00038277001 | |
| 75961 chr11 manual_curation CDS 33221892 33221907 . + 0 Parent=GSCOCT00038277001 | |
| 75962 chr11 manual_curation CDS 33222189 33222296 . + 1 Parent=GSCOCT00038277001 | |
| 75963 chr11 manual_curation CDS 33222392 33222446 . + 1 Parent=GSCOCT00038277001 | |
| 75964 chr11 manual_curation CDS 33222525 33222671 . + 2 Parent=GSCOCT00038277001 | |
| 75965 chr11 manual_curation CDS 33222912 33222990 . + 2 Parent=GSCOCT00038277001 | |
| 75966 chr11 manual_curation CDS 33223404 33223526 . + 0 Parent=GSCOCT00038277001 | |
| 75967 chr11 manual_curation gene 33225255 33226619 . + . ID=GSCOCG00038278001;Name=Cc11_g17190 | |
| 75968 chr11 manual_curation mRNA 33225255 33226619 . + . ID=GSCOCT00038278001;Parent=GSCOCG00038278001;Name=Cc11_g17190 | |
| 75969 chr11 manual_curation polypeptide 33225255 33226619 . + . ID=GSCOCP00038278001;Dbxref=InterPro:IPR002213,PANTHER:PTHR11926,PFAM:PF00201,PROSITE:PS00375,SwissProt:Q5NTH0,SwissProt:Q8GVE3,SwissProt:Q9LSM0,TAIR:AT4G34131.1,TAIR:AT5G49690.1,TAIR:AT5G65550.1,TrEMBL:F6HIX7,TrEMBL:F6I0D3,TrEMBL:F6I5W2;Derives_from=GSCOCT00038278001;Name=Cc11_g17190;Ontology_term=CC_evidence_code:ISS,GO:0008152,CC_EC_number:2.4.1.115,PRODUCT:Putative Flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltransferase,CC_functional_completeness:complete,CC_gene:C12RT1,CC_gene:UGAT,CC_gene:UGT91B1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038278001~ Putative Flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltransferase~ C12RT1~ complete;original_location=join(1499949..1500466%2C1500563..1501313);owner=coffea | |
| 75970 chr11 manual_curation exon 33225255 33225772 . + . Parent=GSCOCT00038278001 | |
| 75971 chr11 manual_curation exon 33225869 33226619 . + . Parent=GSCOCT00038278001 | |
| 75972 chr11 manual_curation CDS 33225255 33225772 . + 0 Parent=GSCOCT00038278001 | |
| 75973 chr11 manual_curation CDS 33225869 33226619 . + 2 Parent=GSCOCT00038278001 | |
| 75974 chr11 manual_curation gene 33227827 33230464 . - . ID=GSCOCG00038279001;Name=Cc11_g17200 | |
| 75975 chr11 manual_curation mRNA 33227827 33230464 . - . ID=GSCOCT00038279001;Parent=GSCOCG00038279001;Name=Cc11_g17200 | |
| 75976 chr11 manual_curation polypeptide 33227950 33230464 . - . ID=GSCOCP00038279001;Dbxref=TAIR:AT5G14090.1,TrEMBL:A5BC57,TrEMBL:B9RMB7,TrEMBL:F6HGC9;Derives_from=GSCOCT00038279001;Name=Cc11_g17200;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B Has 56 Blast hits to 56 proteins in 18 species,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038279001~ Putative unknown protein%3B Has 56 Blast hits to 56 proteins in 18 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 2%3B Plants - 46%3B Viruses - 0%3B Other Eukaryotes - 8 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(1505104..1505158%2C1503822..1504696%2C1503186..1503474%2C1502644..1502663));owner=coffea | |
| 75977 chr11 manual_curation exon 33227827 33227969 . - . Parent=GSCOCT00038279001 | |
| 75978 chr11 manual_curation exon 33228492 33228780 . - . Parent=GSCOCT00038279001 | |
| 75979 chr11 manual_curation exon 33229128 33230002 . - . Parent=GSCOCT00038279001 | |
| 75980 chr11 manual_curation exon 33230410 33230464 . - . Parent=GSCOCT00038279001 | |
| 75981 chr11 manual_curation CDS 33227950 33227969 . - 1 Parent=GSCOCT00038279001 | |
| 75982 chr11 manual_curation CDS 33228492 33228780 . - 0 Parent=GSCOCT00038279001 | |
| 75983 chr11 manual_curation CDS 33229128 33230002 . - 1 Parent=GSCOCT00038279001 | |
| 75984 chr11 manual_curation CDS 33230410 33230464 . - 0 Parent=GSCOCT00038279001 | |
| 75985 chr11 manual_curation gene 33241409 33242212 . - . ID=GSCOCG00038281001;Name=Cc11_g17210 | |
| 75986 chr11 manual_curation mRNA 33241409 33242212 . - . ID=GSCOCT00038281001;Parent=GSCOCG00038281001;Name=Cc11_g17210 | |
| 75987 chr11 manual_curation polypeptide 33241409 33242212 . - . ID=GSCOCP00038281001;Dbxref=TAIR:AT1G12020.1,TAIR:AT1G24270.1,TAIR:AT5G13090.1,TrEMBL:B9RMB4,TrEMBL:F6GSW9,TrEMBL:F6HGD1;Derives_from=GSCOCT00038281001;Name=Cc11_g17210;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038281001~ Putative unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24270.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(1516103..1516906);owner=coffea | |
| 75988 chr11 manual_curation exon 33241409 33242212 . - . Parent=GSCOCT00038281001 | |
| 75989 chr11 manual_curation CDS 33241409 33242212 . - 0 Parent=GSCOCT00038281001 | |
| 75990 chr11 manual_curation gene 33245886 33248125 . - . ID=GSCOCG00038282001;Name=Cc11_g17220 | |
| 75991 chr11 manual_curation mRNA 33245886 33248125 . - . ID=GSCOCT00038282001;Parent=GSCOCG00038282001;Name=Cc11_g17220 | |
| 75992 chr11 manual_curation polypeptide 33246133 33247252 . - . ID=GSCOCP00038282001;Dbxref=TAIR:AT1G27990.1,TAIR:AT5G23920.1,TAIR:AT5G52420.1,TrEMBL:A5BC59,TrEMBL:B9RMB3,TrEMBL:D7TB12;Derives_from=GSCOCT00038282001;Name=Cc11_g17220;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038282001~ unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52420.1)%3B Has 86 Blast hits to 86 proteins in 15 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 84%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(1521305..1521946%2C1520827..1521042));owner=coffea | |
| 75993 chr11 manual_curation exon 33245886 33246348 . - . Parent=GSCOCT00038282001 | |
| 75994 chr11 manual_curation exon 33246611 33248125 . - . Parent=GSCOCT00038282001 | |
| 75995 chr11 manual_curation CDS 33246133 33246348 . - 0 Parent=GSCOCT00038282001 | |
| 75996 chr11 manual_curation CDS 33246611 33247252 . - 0 Parent=GSCOCT00038282001 | |
| 75997 chr11 manual_curation gene 33251998 33253020 . + . ID=GSCOCG00038283001;Name=Cc11_g17230 | |
| 75998 chr11 manual_curation mRNA 33251998 33253020 . + . ID=GSCOCT00038283001;Parent=GSCOCG00038283001;Name=Cc11_g17230 | |
| 75999 chr11 manual_curation polypeptide 33251998 33253020 . + . ID=GSCOCP00038283001;Dbxref=InterPro:IPR006121,PFAM:PF00403,PROFILE:PS50846,SUPERFAMILY:SSF55008,TAIR:AT1G29000.1,TAIR:AT3G02960.1,TAIR:AT5G63530.1,TrEMBL:B9IFE7,TrEMBL:D7L0B3,TrEMBL:F6I1M6;Derives_from=GSCOCT00038283001;Name=Cc11_g17230;Ontology_term=CC_evidence_code:ISS,GO:0030001,GO:0046872,CC_EC_number:missing_EC_number,PRODUCT:Putative Heavy metal transport/detoxification superfamily protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038283001~ Putative Heavy metal transport/detoxification superfamily protein~ unknown_gene~ complete;original_location=join(1526692..1526782%2C1526884..1527059%2C1527192..1527279%2C1527416..1527714);owner=coffea | |
| 76000 chr11 manual_curation exon 33251998 33252088 . + . Parent=GSCOCT00038283001 | |
| 76001 chr11 manual_curation exon 33252190 33252365 . + . Parent=GSCOCT00038283001 | |
| 76002 chr11 manual_curation exon 33252498 33252585 . + . Parent=GSCOCT00038283001 | |
| 76003 chr11 manual_curation exon 33252722 33253020 . + . Parent=GSCOCT00038283001 | |
| 76004 chr11 manual_curation CDS 33251998 33252088 . + 0 Parent=GSCOCT00038283001 | |
| 76005 chr11 manual_curation CDS 33252190 33252365 . + 1 Parent=GSCOCT00038283001 | |
| 76006 chr11 manual_curation CDS 33252498 33252585 . + 0 Parent=GSCOCT00038283001 | |
| 76007 chr11 manual_curation CDS 33252722 33253020 . + 1 Parent=GSCOCT00038283001 | |
| 76008 chr11 manual_curation gene 33255520 33259135 . + . ID=GSCOCG00038285001;Name=Cc11_g17240 | |
| 76009 chr11 manual_curation mRNA 33255520 33259135 . + . ID=GSCOCT00038285001;Parent=GSCOCG00038285001;Name=Cc11_g17240 | |
| 76010 chr11 manual_curation polypeptide 33256323 33258666 . + . ID=GSCOCP00038285001;Dbxref=TAIR:AT5G13100.1,TrEMBL:A5BWC8,TrEMBL:B9GMN6,TrEMBL:F6I1M5;Derives_from=GSCOCT00038285001;Name=Cc11_g17240;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:unknown protein%3B Has 1807 Blast hits to 1807 proteins in 277 species,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038285001~ unknown protein%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).~ unknown_gene~ fragment;original_location=join(1531017..1531147%2C1531916..1532156%2C1532957..1533074%2C1533269..1533360);owner=coffea | |
| 76011 chr11 manual_curation exon 33255520 33256453 . + . Parent=GSCOCT00038285001 | |
| 76012 chr11 manual_curation exon 33257222 33257462 . + . Parent=GSCOCT00038285001 | |
| 76013 chr11 manual_curation exon 33258263 33258380 . + . Parent=GSCOCT00038285001 | |
| 76014 chr11 manual_curation exon 33258575 33259135 . + . Parent=GSCOCT00038285001 | |
| 76015 chr11 manual_curation CDS 33256323 33256453 . + 0 Parent=GSCOCT00038285001 | |
| 76016 chr11 manual_curation CDS 33257222 33257462 . + 2 Parent=GSCOCT00038285001 | |
| 76017 chr11 manual_curation CDS 33258263 33258380 . + 0 Parent=GSCOCT00038285001 | |
| 76018 chr11 manual_curation CDS 33258575 33258666 . + 1 Parent=GSCOCT00038285001 | |
| 76019 chr11 manual_curation gene 33264549 33265606 . + . ID=GSCOCG00038286001;Name=Cc11_g17250 | |
| 76020 chr11 manual_curation mRNA 33264549 33265606 . + . ID=GSCOCT00038286001;Parent=GSCOCG00038286001;Name=Cc11_g17250 | |
| 76021 chr11 manual_curation polypeptide 33264650 33265402 . + . ID=GSCOCP00038286001;Dbxref=TrEMBL:B9GMN7,TrEMBL:B9I3V2,TrEMBL:B9RMA9;Derives_from=GSCOCT00038286001;Name=Cc11_g17250;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Predicted protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038286001~ Putative Predicted protein~ unknown_gene~ complete;original_location=1539344..1540096;owner=coffea | |
| 76022 chr11 manual_curation exon 33264549 33265606 . + . Parent=GSCOCT00038286001 | |
| 76023 chr11 manual_curation CDS 33264650 33265402 . + 0 Parent=GSCOCT00038286001 | |
| 76024 chr11 manual_curation gene 33269408 33275233 . + . ID=GSCOCG00038287001;Name=Cc11_g17260 | |
| 76025 chr11 manual_curation mRNA 33269408 33275233 . + . ID=GSCOCT00038287001;Parent=GSCOCG00038287001;Name=Cc11_g17260 | |
| 76026 chr11 manual_curation polypeptide 33269754 33274776 . + . ID=GSCOCP00038287001;Dbxref=GENE3D:G3DSA:3.40.50.720,InterPro:IPR001282,InterPro:IPR016040,InterPro:IPR019796,InterPro:IPR022674,InterPro:IPR022675,PANTHER:PTHR23429,PFAM:PF00479,PFAM:PF02781,PRINTS:PR00079,PROSITE:PS00069,SwissProt:Q43793,SwissProt:Q8L743,SwissProt:Q9FY99,TAIR:AT1G24280.1,TAIR:AT5G13110.1,TAIR:AT5G35790.1,TIGRFAMs:TIGR00871,TrEMBL:B9RMA8,TrEMBL:D7U5Y0,TrEMBL:Q9LL88;Derives_from=GSCOCT00038287001;Name=Cc11_g17260;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0004345,GO:0005488,GO:0006006,GO:0008152,GO:0050661,GO:0055114,CC_EC_number:1.1.1.49,PRODUCT:Glucose-6-phosphate 1-dehydrogenase%2C chloroplastic,CC_functional_completeness:complete,CC_gene:At5g13110,CC_gene:At1g24280;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038287001~ Glucose-6-phosphate 1-dehydrogenase%2C chloroplastic~ At5g13110~ complete;original_location=join(1544448..1544634%2C1545031..1545263%2C1545381..1545475%2C1545643..1545757%2C1546561..1546766%2C1546892..1547041%2C1547122..1547242%2C1547329..1547558%2C1547662..1547862%2C1549221..1549470);owner=coffea | |
| 76027 chr11 manual_curation exon 33269408 33269940 . + . Parent=GSCOCT00038287001 | |
| 76028 chr11 manual_curation exon 33270337 33270569 . + . Parent=GSCOCT00038287001 | |
| 76029 chr11 manual_curation exon 33270687 33270781 . + . Parent=GSCOCT00038287001 | |
| 76030 chr11 manual_curation exon 33270949 33271063 . + . Parent=GSCOCT00038287001 | |
| 76031 chr11 manual_curation exon 33271867 33272072 . + . Parent=GSCOCT00038287001 | |
| 76032 chr11 manual_curation exon 33272198 33272347 . + . Parent=GSCOCT00038287001 | |
| 76033 chr11 manual_curation exon 33272428 33272548 . + . Parent=GSCOCT00038287001 | |
| 76034 chr11 manual_curation exon 33272635 33272864 . + . Parent=GSCOCT00038287001 | |
| 76035 chr11 manual_curation exon 33272968 33273168 . + . Parent=GSCOCT00038287001 | |
| 76036 chr11 manual_curation exon 33274527 33275233 . + . Parent=GSCOCT00038287001 | |
| 76037 chr11 manual_curation CDS 33269754 33269940 . + 0 Parent=GSCOCT00038287001 | |
| 76038 chr11 manual_curation CDS 33270337 33270569 . + 1 Parent=GSCOCT00038287001 | |
| 76039 chr11 manual_curation CDS 33270687 33270781 . + 0 Parent=GSCOCT00038287001 | |
| 76040 chr11 manual_curation CDS 33270949 33271063 . + 2 Parent=GSCOCT00038287001 | |
| 76041 chr11 manual_curation CDS 33271867 33272072 . + 0 Parent=GSCOCT00038287001 | |
| 76042 chr11 manual_curation CDS 33272198 33272347 . + 2 Parent=GSCOCT00038287001 | |
| 76043 chr11 manual_curation CDS 33272428 33272548 . + 2 Parent=GSCOCT00038287001 | |
| 76044 chr11 manual_curation CDS 33272635 33272864 . + 0 Parent=GSCOCT00038287001 | |
| 76045 chr11 manual_curation CDS 33272968 33273168 . + 2 Parent=GSCOCT00038287001 | |
| 76046 chr11 manual_curation CDS 33274527 33274776 . + 2 Parent=GSCOCT00038287001 | |
| 76047 chr11 manual_curation gene 33280004 33280816 . + . ID=GSCOCG00038288001;Name=Cc11_g17270 | |
| 76048 chr11 manual_curation mRNA 33280004 33280816 . + . ID=GSCOCT00038288001;Parent=GSCOCG00038288001;Name=Cc11_g17270 | |
| 76049 chr11 manual_curation polypeptide 33280004 33280816 . + . ID=GSCOCP00038288001;Dbxref=InterPro:IPR005333,InterPro:IPR017887,PFAM:PF03634,PROFILE:PS51369,SwissProt:Q9C518,SwissProt:Q9C9L2,SwissProt:Q9LSD5,TAIR:AT1G58100.1,TAIR:AT1G69690.1,TAIR:AT3G27010.1,TrEMBL:B9GMN9,TrEMBL:B9RMA7,TrEMBL:C6TGU9;Derives_from=GSCOCT00038288001;Name=Cc11_g17270;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Transcription factor TCP20,CC_functional_completeness:fragment,CC_gene:TCP20,CC_gene:TCP8,CC_gene:TCP15;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038288001~ Transcription factor TCP20~ TCP20~ fragment;original_location=1554698..1555510;owner=coffea | |
| 76050 chr11 manual_curation exon 33280004 33280816 . + . Parent=GSCOCT00038288001 | |
| 76051 chr11 manual_curation CDS 33280004 33280816 . + 0 Parent=GSCOCT00038288001 | |
| 76052 chr11 manual_curation gene 33288977 33292476 . + . ID=GSCOCG00038290001;Name=Cc11_g17280 | |
| 76053 chr11 manual_curation mRNA 33288977 33292476 . + . ID=GSCOCT00038290001;Parent=GSCOCG00038290001;Name=Cc11_g17280 | |
| 76054 chr11 manual_curation polypeptide 33289517 33292122 . + . ID=GSCOCP00038290001;Dbxref=InterPro:IPR002912,PFAM:PF01842,TAIR:AT1G69040.2,TAIR:AT1G76990.1,TAIR:AT2G03730.1,TrEMBL:A5C2B4,TrEMBL:B9RMA6,TrEMBL:D7U5Y3;Derives_from=GSCOCT00038290001;Name=Cc11_g17280;Ontology_term=CC_evidence_code:ISS,GO:0008152,GO:0016597,CC_EC_number:missing_EC_number,PRODUCT:ACT domain repeat 4,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038290001~ ACT domain repeat 4~ unknown_gene~ complete;original_location=join(1564211..1564284%2C1564558..1564603%2C1564781..1564895%2C1565004..1565071%2C1565434..1566033%2C1566260..1566364%2C1566460..1566816);owner=coffea | |
| 76055 chr11 manual_curation exon 33288977 33289590 . + . Parent=GSCOCT00038290001 | |
| 76056 chr11 manual_curation exon 33289864 33289909 . + . Parent=GSCOCT00038290001 | |
| 76057 chr11 manual_curation exon 33290087 33290201 . + . Parent=GSCOCT00038290001 | |
| 76058 chr11 manual_curation exon 33290310 33290377 . + . Parent=GSCOCT00038290001 | |
| 76059 chr11 manual_curation exon 33290740 33291339 . + . Parent=GSCOCT00038290001 | |
| 76060 chr11 manual_curation exon 33291566 33291670 . + . Parent=GSCOCT00038290001 | |
| 76061 chr11 manual_curation exon 33291766 33292476 . + . Parent=GSCOCT00038290001 | |
| 76062 chr11 manual_curation CDS 33289517 33289590 . + 0 Parent=GSCOCT00038290001 | |
| 76063 chr11 manual_curation CDS 33289864 33289909 . + 2 Parent=GSCOCT00038290001 | |
| 76064 chr11 manual_curation CDS 33290087 33290201 . + 0 Parent=GSCOCT00038290001 | |
| 76065 chr11 manual_curation CDS 33290310 33290377 . + 1 Parent=GSCOCT00038290001 | |
| 76066 chr11 manual_curation CDS 33290740 33291339 . + 0 Parent=GSCOCT00038290001 | |
| 76067 chr11 manual_curation CDS 33291566 33291670 . + 0 Parent=GSCOCT00038290001 | |
| 76068 chr11 manual_curation CDS 33291766 33292122 . + 0 Parent=GSCOCT00038290001 | |
| 76069 chr11 manual_curation gene 33293171 33297282 . - . ID=GSCOCG00038291001;Name=Cc11_g17290 | |
| 76070 chr11 manual_curation mRNA 33293171 33297282 . - . ID=GSCOCT00038291001;Parent=GSCOCG00038291001;Name=Cc11_g17290 | |
| 76071 chr11 manual_curation polypeptide 33293671 33296972 . - . ID=GSCOCP00038291001;Dbxref=GENE3D:G3DSA:2.40.100.10,InterPro:IPR002130,InterPro:IPR015891,InterPro:IPR020892,PFAM:PF00160,PRINTS:PR00153,PROFILE:PS50072,PROSITE:PS00170,SUPERFAMILY:SSF50891,SwissProt:P34791,SwissProt:Q01490,SwissProt:Q9ASS6,TAIR:AT2G29960.1,TAIR:AT3G62030.2,TAIR:AT5G13120.1,TrEMBL:B9GZD4,TrEMBL:B9RMA5,TrEMBL:D7U5Y4;Derives_from=GSCOCT00038291001;Name=Cc11_g17290;Ontology_term=CC_evidence_code:ISS,GO:0003755,GO:0006457,CC_EC_number:5.2.1.8,PRODUCT:Peptidyl-prolyl cis-trans isomerase CYP20-2%2C chloroplastic,CC_functional_completeness:complete,CC_gene:CYP20-2,CC_gene:CYP20-3,CC_gene:CYPB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038291001~ Peptidyl-prolyl cis-trans isomerase CYP20-2%2C chloroplastic~ CYP20-2~ complete;original_location=complement(join(1571643..1571666%2C1571327..1571542%2C1570826..1570976%2C1570636..1570724%2C1569489..1569543%2C1569298..1569383%2C1568365..1568517));owner=coffea | |
| 76072 chr11 manual_curation exon 33293171 33293823 . - . Parent=GSCOCT00038291001 | |
| 76073 chr11 manual_curation exon 33294604 33294689 . - . Parent=GSCOCT00038291001 | |
| 76074 chr11 manual_curation exon 33294795 33294849 . - . Parent=GSCOCT00038291001 | |
| 76075 chr11 manual_curation exon 33295942 33296030 . - . Parent=GSCOCT00038291001 | |
| 76076 chr11 manual_curation exon 33296132 33296282 . - . Parent=GSCOCT00038291001 | |
| 76077 chr11 manual_curation exon 33296633 33296848 . - . Parent=GSCOCT00038291001 | |
| 76078 chr11 manual_curation exon 33296949 33297282 . - . Parent=GSCOCT00038291001 | |
| 76079 chr11 manual_curation CDS 33293671 33293823 . - 0 Parent=GSCOCT00038291001 | |
| 76080 chr11 manual_curation CDS 33294604 33294689 . - 1 Parent=GSCOCT00038291001 | |
| 76081 chr11 manual_curation CDS 33294795 33294849 . - 0 Parent=GSCOCT00038291001 | |
| 76082 chr11 manual_curation CDS 33295942 33296030 . - 1 Parent=GSCOCT00038291001 | |
| 76083 chr11 manual_curation CDS 33296132 33296282 . - 0 Parent=GSCOCT00038291001 | |
| 76084 chr11 manual_curation CDS 33296633 33296848 . - 0 Parent=GSCOCT00038291001 | |
| 76085 chr11 manual_curation CDS 33296949 33296972 . - 0 Parent=GSCOCT00038291001 | |
| 76086 chr11 manual_curation gene 33302044 33306043 . - . ID=GSCOCG00038293001;Name=Cc11_g17300 | |
| 76087 chr11 manual_curation mRNA 33302044 33306043 . - . ID=GSCOCT00038293001;Parent=GSCOCG00038293001;Name=Cc11_g17300 | |
| 76088 chr11 manual_curation polypeptide 33302332 33305653 . - . ID=GSCOCP00038293001;Dbxref=InterPro:IPR006992,PFAM:PF04909,TAIR:AT2G35450.1,TrEMBL:A9PGT3,TrEMBL:F6I1N0,TrEMBL:G7KUS9;Derives_from=GSCOCT00038293001;Name=Cc11_g17300;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,CC_EC_number:missing_EC_number,PRODUCT:catalytics%3Bhydrolases,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038293001~ catalytics%3Bhydrolases~ unknown_gene~ complete;original_location=complement(join(1580246..1580347%2C1580034..1580105%2C1579580..1579659%2C1578758..1578857%2C1578618..1578671%2C1578062..1578139%2C1577864..1577961%2C1577710..1577767%2C1577314..1577435%2C1577026..1577179));owner=coffea | |
| 76089 chr11 manual_curation exon 33302044 33302485 . - . Parent=GSCOCT00038293001 | |
| 76090 chr11 manual_curation exon 33302620 33302741 . - . Parent=GSCOCT00038293001 | |
| 76091 chr11 manual_curation exon 33303016 33303073 . - . Parent=GSCOCT00038293001 | |
| 76092 chr11 manual_curation exon 33303170 33303267 . - . Parent=GSCOCT00038293001 | |
| 76093 chr11 manual_curation exon 33303368 33303445 . - . Parent=GSCOCT00038293001 | |
| 76094 chr11 manual_curation exon 33303924 33303977 . - . Parent=GSCOCT00038293001 | |
| 76095 chr11 manual_curation exon 33304064 33304163 . - . Parent=GSCOCT00038293001 | |
| 76096 chr11 manual_curation exon 33304886 33304965 . - . Parent=GSCOCT00038293001 | |
| 76097 chr11 manual_curation exon 33305340 33305411 . - . Parent=GSCOCT00038293001 | |
| 76098 chr11 manual_curation exon 33305552 33306043 . - . Parent=GSCOCT00038293001 | |
| 76099 chr11 manual_curation CDS 33302332 33302485 . - 2 Parent=GSCOCT00038293001 | |
| 76100 chr11 manual_curation CDS 33302620 33302741 . - 0 Parent=GSCOCT00038293001 | |
| 76101 chr11 manual_curation CDS 33303016 33303073 . - 2 Parent=GSCOCT00038293001 | |
| 76102 chr11 manual_curation CDS 33303170 33303267 . - 0 Parent=GSCOCT00038293001 | |
| 76103 chr11 manual_curation CDS 33303368 33303445 . - 0 Parent=GSCOCT00038293001 | |
| 76104 chr11 manual_curation CDS 33303924 33303977 . - 0 Parent=GSCOCT00038293001 | |
| 76105 chr11 manual_curation CDS 33304064 33304163 . - 2 Parent=GSCOCT00038293001 | |
| 76106 chr11 manual_curation CDS 33304886 33304965 . - 0 Parent=GSCOCT00038293001 | |
| 76107 chr11 manual_curation CDS 33305340 33305411 . - 0 Parent=GSCOCT00038293001 | |
| 76108 chr11 manual_curation CDS 33305552 33305653 . - 0 Parent=GSCOCT00038293001 | |
| 76109 chr11 manual_curation gene 33306721 33315902 . - . ID=GSCOCG00038294001;Name=Cc11_g17310 | |
| 76110 chr11 manual_curation mRNA 33306721 33315902 . - . ID=GSCOCT00038294001;Parent=GSCOCG00038294001;Name=Cc11_g17310 | |
| 76111 chr11 manual_curation polypeptide 33307044 33315561 . - . ID=GSCOCP00038294001;Dbxref=InterPro:IPR003169,PFAM:PF02213,PROFILE:PS50829,SMART:SM00444,SUPERFAMILY:SSF55277,TAIR:AT1G24300.1,TAIR:AT1G27430.1,TAIR:AT5G42950.1,TrEMBL:A5APT2,TrEMBL:B9RMA3,TrEMBL:D7SVM3;Derives_from=GSCOCT00038294001;Name=Cc11_g17310;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative GYF domain-containing protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038294001~ Putative GYF domain-containing protein~ unknown_gene~ complete;original_location=complement(join(1590180..1590255%2C1589332..1589379%2C1589094..1589164%2C1587552..1588376%2C1587304..1587397%2C1587028..1587192%2C1586161..1586946%2C1584075..1586077%2C1583856..1583970%2C1583711..1583783%2C1582535..1582686%2C1581738..1582066));owner=coffea | |
| 76112 chr11 manual_curation exon 33306721 33307372 . - . Parent=GSCOCT00038294001 | |
| 76113 chr11 manual_curation exon 33307841 33307992 . - . Parent=GSCOCT00038294001 | |
| 76114 chr11 manual_curation exon 33309017 33309089 . - . Parent=GSCOCT00038294001 | |
| 76115 chr11 manual_curation exon 33309162 33309276 . - . Parent=GSCOCT00038294001 | |
| 76116 chr11 manual_curation exon 33309381 33311383 . - . Parent=GSCOCT00038294001 | |
| 76117 chr11 manual_curation exon 33311467 33312252 . - . Parent=GSCOCT00038294001 | |
| 76118 chr11 manual_curation exon 33312334 33312498 . - . Parent=GSCOCT00038294001 | |
| 76119 chr11 manual_curation exon 33312610 33312703 . - . Parent=GSCOCT00038294001 | |
| 76120 chr11 manual_curation exon 33312858 33313682 . - . Parent=GSCOCT00038294001 | |
| 76121 chr11 manual_curation exon 33314400 33314470 . - . Parent=GSCOCT00038294001 | |
| 76122 chr11 manual_curation exon 33314638 33314685 . - . Parent=GSCOCT00038294001 | |
| 76123 chr11 manual_curation exon 33315486 33315902 . - . Parent=GSCOCT00038294001 | |
| 76124 chr11 manual_curation CDS 33307044 33307372 . - 1 Parent=GSCOCT00038294001 | |
| 76125 chr11 manual_curation CDS 33307841 33307992 . - 2 Parent=GSCOCT00038294001 | |
| 76126 chr11 manual_curation CDS 33309017 33309089 . - 1 Parent=GSCOCT00038294001 | |
| 76127 chr11 manual_curation CDS 33309162 33309276 . - 0 Parent=GSCOCT00038294001 | |
| 76128 chr11 manual_curation CDS 33309381 33311383 . - 1 Parent=GSCOCT00038294001 | |
| 76129 chr11 manual_curation CDS 33311467 33312252 . - 1 Parent=GSCOCT00038294001 | |
| 76130 chr11 manual_curation CDS 33312334 33312498 . - 1 Parent=GSCOCT00038294001 | |
| 76131 chr11 manual_curation CDS 33312610 33312703 . - 0 Parent=GSCOCT00038294001 | |
| 76132 chr11 manual_curation CDS 33312858 33313682 . - 0 Parent=GSCOCT00038294001 | |
| 76133 chr11 manual_curation CDS 33314400 33314470 . - 1 Parent=GSCOCT00038294001 | |
| 76134 chr11 manual_curation CDS 33314638 33314685 . - 1 Parent=GSCOCT00038294001 | |
| 76135 chr11 manual_curation CDS 33315486 33315561 . - 0 Parent=GSCOCT00038294001 | |
| 76136 chr11 manual_curation gene 33318722 33324750 . - . ID=GSCOCG00038296001;Name=Cc11_g17320 | |
| 76137 chr11 manual_curation mRNA 33318722 33324750 . - . ID=GSCOCT00038296001;Parent=GSCOCG00038296001;Name=Cc11_g17320 | |
| 76138 chr11 manual_curation polypeptide 33319238 33324295 . - . ID=GSCOCP00038296001;Dbxref=InterPro:IPR006680,InterPro:IPR011059,PFAM:PF01979,SUPERFAMILY:SSF51338,SwissProt:A5UMN6,SwissProt:B0K2W0,SwissProt:B0K8R8,TrEMBL:A5B5F8,TrEMBL:B9RMA1,TrEMBL:F6I1N3;Derives_from=GSCOCT00038296001;Name=Cc11_g17320;Ontology_term=CC_evidence_code:ISS,GO:0016787,CC_EC_number:3.8.1.8,PRODUCT:Putative 5-methylthioadenosine/S-adenosylhomocysteine deaminase,CC_functional_completeness:fragment,CC_gene:mtaD;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038296001~ Putative 5-methylthioadenosine/S-adenosylhomocysteine deaminase~ mtaD~ fragment;original_location=complement(join(1598927..1598989%2C1598621..1598779%2C1597909..1598058%2C1596913..1597056%2C1596197..1596353%2C1595470..1595642%2C1595006..1595061%2C1594173..1594275%2C1593932..1594021));owner=coffea | |
| 76139 chr11 manual_curation exon 33318722 33319327 . - . Parent=GSCOCT00038296001 | |
| 76140 chr11 manual_curation exon 33319479 33319581 . - . Parent=GSCOCT00038296001 | |
| 76141 chr11 manual_curation exon 33320312 33320367 . - . Parent=GSCOCT00038296001 | |
| 76142 chr11 manual_curation exon 33320776 33320948 . - . Parent=GSCOCT00038296001 | |
| 76143 chr11 manual_curation exon 33321503 33321659 . - . Parent=GSCOCT00038296001 | |
| 76144 chr11 manual_curation exon 33322219 33322362 . - . Parent=GSCOCT00038296001 | |
| 76145 chr11 manual_curation exon 33323215 33323364 . - . Parent=GSCOCT00038296001 | |
| 76146 chr11 manual_curation exon 33323927 33324085 . - . Parent=GSCOCT00038296001 | |
| 76147 chr11 manual_curation exon 33324233 33324750 . - . Parent=GSCOCT00038296001 | |
| 76148 chr11 manual_curation CDS 33319238 33319327 . - 0 Parent=GSCOCT00038296001 | |
| 76149 chr11 manual_curation CDS 33319479 33319581 . - 2 Parent=GSCOCT00038296001 | |
| 76150 chr11 manual_curation CDS 33320312 33320367 . - 0 Parent=GSCOCT00038296001 | |
| 76151 chr11 manual_curation CDS 33320776 33320948 . - 1 Parent=GSCOCT00038296001 | |
| 76152 chr11 manual_curation CDS 33321503 33321659 . - 0 Parent=GSCOCT00038296001 | |
| 76153 chr11 manual_curation CDS 33322219 33322362 . - 0 Parent=GSCOCT00038296001 | |
| 76154 chr11 manual_curation CDS 33323215 33323364 . - 0 Parent=GSCOCT00038296001 | |
| 76155 chr11 manual_curation CDS 33323927 33324085 . - 0 Parent=GSCOCT00038296001 | |
| 76156 chr11 manual_curation CDS 33324233 33324295 . - 0 Parent=GSCOCT00038296001 | |
| 76157 chr11 manual_curation gene 33334414 33334893 . - . ID=GSCOCG00038298001;Name=Cc11_g17330 | |
| 76158 chr11 manual_curation mRNA 33334414 33334893 . - . ID=GSCOCT00038298001;Parent=GSCOCG00038298001;Name=Cc11_g17330 | |
| 76159 chr11 manual_curation polypeptide 33334414 33334893 . - . ID=GSCOCP00038298001;Dbxref=InterPro:IPR003676,PFAM:PF02519,TAIR:AT1G75590.1,TAIR:AT5G10990.1,TAIR:AT5G50760.1,TrEMBL:B9GMP4,TrEMBL:B9GZD1,TrEMBL:F6I1N4;Derives_from=GSCOCT00038298001;Name=Cc11_g17330;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:SAUR family protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038298001~ SAUR family protein~ unknown_gene~ complete;original_location=complement(1609108..1609587);owner=coffea | |
| 76160 chr11 manual_curation exon 33334414 33334893 . - . Parent=GSCOCT00038298001 | |
| 76161 chr11 manual_curation CDS 33334414 33334893 . - 0 Parent=GSCOCT00038298001 | |
| 76162 chr11 manual_curation gene 33342211 33343597 . - . ID=GSCOCG00038300001;Name=Cc11_g17340 | |
| 76163 chr11 manual_curation mRNA 33342211 33343597 . - . ID=GSCOCT00038300001;Parent=GSCOCG00038300001;Name=Cc11_g17340 | |
| 76164 chr11 manual_curation polypeptide 33342377 33343525 . - . ID=GSCOCP00038300001;Dbxref=InterPro:IPR006041,PFAM:PF01190,TAIR:AT3G26960.1,TAIR:AT5G13140.1,TAIR:AT5G41050.1,TrEMBL:A5AJL0,TrEMBL:B9GMP5,TrEMBL:I1KZG6;Derives_from=GSCOCT00038300001;Name=Cc11_g17340;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Pollen Ole e 1 allergen and extensin family protein,CC_functional_completeness:modules,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038300001~ Putative Pollen Ole e 1 allergen and extensin family protein~ unknown_gene~ modules;original_location=complement(join(1618009..1618219%2C1617071..1617879));owner=coffea | |
| 76165 chr11 manual_curation exon 33342211 33343185 . - . Parent=GSCOCT00038300001 | |
| 76166 chr11 manual_curation exon 33343315 33343597 . - . Parent=GSCOCT00038300001 | |
| 76167 chr11 manual_curation CDS 33342377 33343185 . - 1 Parent=GSCOCT00038300001 | |
| 76168 chr11 manual_curation CDS 33343315 33343525 . - 0 Parent=GSCOCT00038300001 | |
| 76169 chr11 manual_curation gene 33346968 33347384 . - . ID=GSCOCG00038301001;Name=Cc11_g17350 | |
| 76170 chr11 manual_curation mRNA 33346968 33347384 . - . ID=GSCOCT00038301001;Parent=GSCOCG00038301001;Name=Cc11_g17350 | |
| 76171 chr11 manual_curation polypeptide 33346968 33347384 . - . ID=GSCOCP00038301001;Dbxref=GENE3D:G3DSA:3.40.30.10,InterPro:IPR002109,InterPro:IPR011905,InterPro:IPR012335,InterPro:IPR012336,PFAM:PF00462,PROFILE:PS51354,SUPERFAMILY:SSF52833,SwissProt:Q0IMV4,SwissProt:Q6K609,SwissProt:Q7G8Y5,TAIR:AT3G02000.1,TAIR:AT4G15700.1,TAIR:AT5G14070.1,TIGRFAMs:TIGR02189,TrEMBL:B9RM97,TrEMBL:F6I1N5,TrEMBL:I1MLE6;Derives_from=GSCOCT00038301001;Name=Cc11_g17350;Ontology_term=CC_evidence_code:ISS,GO:0009055,GO:0015035,GO:0045454,CC_EC_number:missing_EC_number,PRODUCT:Glutaredoxin-C1,CC_functional_completeness:modules,CC_gene:GRXC1,CC_gene:GRXC3,CC_gene:GRXC14;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038301001~ Glutaredoxin-C1~ GRXC1~ modules;original_location=complement(1621662..1622078);owner=coffea | |
| 76172 chr11 manual_curation exon 33346968 33347384 . - . Parent=GSCOCT00038301001 | |
| 76173 chr11 manual_curation CDS 33346968 33347384 . - 0 Parent=GSCOCT00038301001 | |
| 76174 chr11 manual_curation gene 33351804 33352605 . + . ID=GSCOCG00038302001;Name=Cc11_g17360 | |
| 76175 chr11 manual_curation mRNA 33351804 33352605 . + . ID=GSCOCT00038302001;Parent=GSCOCG00038302001;Name=Cc11_g17360 | |
| 76176 chr11 manual_curation polypeptide 33351804 33352605 . + . ID=GSCOCP00038302001;Dbxref=SwissProt:Q9LU93,SwissProt:Q9XFH3,TAIR:AT3G25980.1,TrEMBL:I1LNB9,TrEMBL:I1LNC1,TrEMBL:I1MYJ1;Derives_from=GSCOCT00038302001;Name=Cc11_g17360;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:MAD2;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038302001~ Hypothetical protein~ MAD2~ missing_functional_completeness;original_location=join(1626498..1626576%2C1626908..1626916%2C1627013..1627105%2C1627193..1627299);owner=coffea | |
| 76177 chr11 manual_curation exon 33351804 33351882 . + . Parent=GSCOCT00038302001 | |
| 76178 chr11 manual_curation exon 33352214 33352222 . + . Parent=GSCOCT00038302001 | |
| 76179 chr11 manual_curation exon 33352319 33352411 . + . Parent=GSCOCT00038302001 | |
| 76180 chr11 manual_curation exon 33352499 33352605 . + . Parent=GSCOCT00038302001 | |
| 76181 chr11 manual_curation CDS 33351804 33351882 . + 0 Parent=GSCOCT00038302001 | |
| 76182 chr11 manual_curation CDS 33352214 33352222 . + 1 Parent=GSCOCT00038302001 | |
| 76183 chr11 manual_curation CDS 33352319 33352411 . + 1 Parent=GSCOCT00038302001 | |
| 76184 chr11 manual_curation CDS 33352499 33352605 . + 1 Parent=GSCOCT00038302001 | |
| 76185 chr11 manual_curation gene 33357731 33359866 . - . ID=GSCOCG00038303001;Name=Cc11_g17370 | |
| 76186 chr11 manual_curation mRNA 33357731 33359866 . - . ID=GSCOCT00038303001;Parent=GSCOCG00038303001;Name=Cc11_g17370 | |
| 76187 chr11 manual_curation polypeptide 33357731 33359866 . - . ID=GSCOCP00038303001;Dbxref=InterPro:IPR004140,PANTHER:PTHR12542,PFAM:PF03081,SwissProt:O35250,SwissProt:O54922,SwissProt:Q9UPT5,TAIR:AT5G13150.1,TAIR:AT5G13990.1,TAIR:AT5G58430.1,TrEMBL:B9GMP7,TrEMBL:B9RM96,TrEMBL:F6I1N2;Derives_from=GSCOCT00038303001;Name=Cc11_g17370;Ontology_term=CC_evidence_code:ISS,GO:0000145,GO:0006887,CC_EC_number:missing_EC_number,PRODUCT:Putative exocyst subunit exo70 family protein C1,CC_functional_completeness:complete,CC_gene:Exoc7,CC_gene:EXOC7;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038303001~ Putative exocyst subunit exo70 family protein C1~ Exoc7~ complete;original_location=complement(1632425..1634560);owner=coffea | |
| 76188 chr11 manual_curation exon 33357731 33359866 . - . Parent=GSCOCT00038303001 | |
| 76189 chr11 manual_curation CDS 33357731 33359866 . - 0 Parent=GSCOCT00038303001 | |
| 76190 chr11 manual_curation gene 33369014 33374100 . + . ID=GSCOCG00038304001;Name=Cc11_g17380 | |
| 76191 chr11 manual_curation mRNA 33369014 33374100 . + . ID=GSCOCT00038304001;Parent=GSCOCG00038304001;Name=Cc11_g17380 | |
| 76192 chr11 manual_curation polypeptide 33369523 33373399 . + . ID=GSCOCP00038304001;Dbxref=InterPro:IPR000719,InterPro:IPR002290,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR017441,InterPro:IPR017442,InterPro:IPR020635,PFAM:PF00069,PROFILE:PS50011,PROSITE:PS00107,PROSITE:PS00108,SMART:SM00219,SMART:SM00220,SUPERFAMILY:SSF56112,SwissProt:Q9FE20,SwissProt:Q9LQQ8,SwissProt:Q9SFT7,TAIR:AT5G02800.1,TAIR:AT5G13160.1,TAIR:AT5G18610.1,TrEMBL:B9GMP8,TrEMBL:B9RM95,TrEMBL:F6I1N7;Derives_from=GSCOCT00038304001;Name=Cc11_g17380;Ontology_term=CC_evidence_code:ISS,GO:0004672,GO:0004674,GO:0005524,GO:0006468,CC_EC_number:2.7.11.25,PRODUCT:Serine/threonine-protein kinase PBS1,CC_functional_completeness:complete,CC_gene:PBS1,CC_gene:At3g07070,CC_gene:At1g07870;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038304001~ Serine/threonine-protein kinase PBS1~ PBS1~ complete;original_location=join(1644217..1644337%2C1644878..1645080%2C1645566..1645755%2C1647126..1647517%2C1647608..1647875%2C1647936..1648093);owner=coffea | |
| 76193 chr11 manual_curation exon 33369014 33369643 . + . Parent=GSCOCT00038304001 | |
| 76194 chr11 manual_curation exon 33370184 33370386 . + . Parent=GSCOCT00038304001 | |
| 76195 chr11 manual_curation exon 33370872 33371061 . + . Parent=GSCOCT00038304001 | |
| 76196 chr11 manual_curation exon 33372432 33372823 . + . Parent=GSCOCT00038304001 | |
| 76197 chr11 manual_curation exon 33372914 33373181 . + . Parent=GSCOCT00038304001 | |
| 76198 chr11 manual_curation exon 33373242 33374100 . + . Parent=GSCOCT00038304001 | |
| 76199 chr11 manual_curation CDS 33369523 33369643 . + 0 Parent=GSCOCT00038304001 | |
| 76200 chr11 manual_curation CDS 33370184 33370386 . + 1 Parent=GSCOCT00038304001 | |
| 76201 chr11 manual_curation CDS 33370872 33371061 . + 0 Parent=GSCOCT00038304001 | |
| 76202 chr11 manual_curation CDS 33372432 33372823 . + 1 Parent=GSCOCT00038304001 | |
| 76203 chr11 manual_curation CDS 33372914 33373181 . + 0 Parent=GSCOCT00038304001 | |
| 76204 chr11 manual_curation CDS 33373242 33373399 . + 1 Parent=GSCOCT00038304001 | |
| 76205 chr11 manual_curation gene 33374853 33376697 . - . ID=GSCOCG00038305001;Name=Cc11_g17390 | |
| 76206 chr11 manual_curation mRNA 33374853 33376697 . - . ID=GSCOCT00038305001;Parent=GSCOCG00038305001;Name=Cc11_g17390 | |
| 76207 chr11 manual_curation polypeptide 33375013 33376568 . - . ID=GSCOCP00038305001;Dbxref=InterPro:IPR004316,InterPro:IPR018169,InterPro:IPR018179,PANTHER:PTHR10791,PANTHER:PTHR10791:SF6,PFAM:PF03083,SwissProt:A2X5B4,SwissProt:B8BKP4,SwissProt:Q6K602,TAIR:AT3G48740.1,TAIR:AT5G13170.1,TAIR:AT5G50790.1,TrEMBL:I1KR79,TrEMBL:I1N5G2,TrEMBL:I1N5G3;Derives_from=GSCOCT00038305001;Name=Cc11_g17390;Ontology_term=CC_evidence_code:ISS,GO:0016020,GO:0016021,CC_EC_number:missing_EC_number,PRODUCT:Putative Bidirectional sugar transporter SWEET15,CC_functional_completeness:complete,CC_gene:SWEET15,CC_gene:SWEET14;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038305001~ Putative Bidirectional sugar transporter SWEET15~ SWEET15~ complete;original_location=complement(join(1651208..1651262%2C1651081..1651117%2C1650775..1650982%2C1650499..1650663%2C1650178..1650297%2C1649707..1650030));owner=coffea | |
| 76208 chr11 manual_curation exon 33374853 33375336 . - . Parent=GSCOCT00038305001 | |
| 76209 chr11 manual_curation exon 33375484 33375603 . - . Parent=GSCOCT00038305001 | |
| 76210 chr11 manual_curation exon 33375805 33375969 . - . Parent=GSCOCT00038305001 | |
| 76211 chr11 manual_curation exon 33376081 33376288 . - . Parent=GSCOCT00038305001 | |
| 76212 chr11 manual_curation exon 33376387 33376423 . - . Parent=GSCOCT00038305001 | |
| 76213 chr11 manual_curation exon 33376514 33376697 . - . Parent=GSCOCT00038305001 | |
| 76214 chr11 manual_curation CDS 33375013 33375336 . - 0 Parent=GSCOCT00038305001 | |
| 76215 chr11 manual_curation CDS 33375484 33375603 . - 0 Parent=GSCOCT00038305001 | |
| 76216 chr11 manual_curation CDS 33375805 33375969 . - 0 Parent=GSCOCT00038305001 | |
| 76217 chr11 manual_curation CDS 33376081 33376288 . - 2 Parent=GSCOCT00038305001 | |
| 76218 chr11 manual_curation CDS 33376387 33376423 . - 1 Parent=GSCOCT00038305001 | |
| 76219 chr11 manual_curation CDS 33376514 33376568 . - 0 Parent=GSCOCT00038305001 | |
| 76220 chr11 manual_curation gene 33384145 33386277 . + . ID=GSCOCG00038306001;Name=Cc11_g17400 | |
| 76221 chr11 manual_curation mRNA 33384145 33386277 . + . ID=GSCOCT00038306001;Parent=GSCOCG00038306001;Name=Cc11_g17400 | |
| 76222 chr11 manual_curation polypeptide 33384190 33385843 . + . ID=GSCOCP00038306001;Dbxref=InterPro:IPR001753,InterPro:IPR018376,PFAM:PF00378,PROSITE:PS00166,SwissProt:O35459,SwissProt:Q13011,SwissProt:Q62651,TAIR:AT4G16210.1,TAIR:AT4G16800.1,TAIR:AT5G43280.1,TrEMBL:B9GMQ0,TrEMBL:B9RM93,TrEMBL:D7U5Z9;Derives_from=GSCOCT00038306001;Name=Cc11_g17400;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,CC_EC_number:4.2.1.17,PRODUCT:Putative Delta(3%2C5)-Delta(2%2C4)-dienoyl-CoA isomerase%2C mitochondrial,CC_functional_completeness:complete,CC_gene:Ech1,CC_gene:ECH1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038306001~ Putative Delta(3%2C5)-Delta(2%2C4)-dienoyl-CoA isomerase%2C mitochondrial~ Ech1~ complete;original_location=join(1658884..1659544%2C1660347..1660537);owner=coffea | |
| 76223 chr11 manual_curation exon 33384145 33384850 . + . Parent=GSCOCT00038306001 | |
| 76224 chr11 manual_curation exon 33385653 33386277 . + . Parent=GSCOCT00038306001 | |
| 76225 chr11 manual_curation CDS 33384190 33384850 . + 0 Parent=GSCOCT00038306001 | |
| 76226 chr11 manual_curation CDS 33385653 33385843 . + 1 Parent=GSCOCT00038306001 | |
| 76227 chr11 manual_curation gene 33399223 33401298 . + . ID=GSCOCG00038308001;Name=Cc11_g17410 | |
| 76228 chr11 manual_curation mRNA 33399223 33401298 . + . ID=GSCOCT00038308001;Parent=GSCOCG00038308001;Name=Cc11_g17410 | |
| 76229 chr11 manual_curation polypeptide 33399546 33400880 . + . ID=GSCOCP00038308001;Dbxref=InterPro:IPR003441,PFAM:PF02365,PROFILE:PS51005,SUPERFAMILY:SSF101941,SwissProt:O49255,SwissProt:Q52QH4,SwissProt:Q53NF7,TAIR:AT1G61110.1,TAIR:AT2G33480.1,TAIR:AT5G13180.1,TrEMBL:B9GMQ3,TrEMBL:B9GZC3,TrEMBL:B9RFW3;Derives_from=GSCOCT00038308001;Name=Cc11_g17410;Ontology_term=CC_evidence_code:ISS,GO:0003677,GO:0045449,CC_EC_number:missing_EC_number,PRODUCT:NAC domain containing protein 83,CC_functional_completeness:complete,CC_gene:NAC029,CC_gene:NAC68,CC_gene:NAC71;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038308001~ NAC domain containing protein 83~ NAC029~ complete;original_location=join(1674240..1674420%2C1674713..1675014%2C1675181..1675457%2C1675498..1675574);owner=coffea | |
| 76230 chr11 manual_curation exon 33399223 33399726 . + . Parent=GSCOCT00038308001 | |
| 76231 chr11 manual_curation exon 33400019 33400320 . + . Parent=GSCOCT00038308001 | |
| 76232 chr11 manual_curation exon 33400487 33400763 . + . Parent=GSCOCT00038308001 | |
| 76233 chr11 manual_curation exon 33400804 33401298 . + . Parent=GSCOCT00038308001 | |
| 76234 chr11 manual_curation CDS 33399546 33399726 . + 0 Parent=GSCOCT00038308001 | |
| 76235 chr11 manual_curation CDS 33400019 33400320 . + 1 Parent=GSCOCT00038308001 | |
| 76236 chr11 manual_curation CDS 33400487 33400763 . + 0 Parent=GSCOCT00038308001 | |
| 76237 chr11 manual_curation CDS 33400804 33400880 . + 1 Parent=GSCOCT00038308001 | |
| 76238 chr11 manual_curation gene 33404704 33408254 . - . ID=GSCOCG00038309001;Name=Cc11_g17420 | |
| 76239 chr11 manual_curation mRNA 33404704 33408254 . - . ID=GSCOCT00038309001;Parent=GSCOCG00038309001;Name=Cc11_g17420 | |
| 76240 chr11 manual_curation polypeptide 33405045 33408254 . - . ID=GSCOCP00038309001;Dbxref=TAIR:AT1G27435.1,TrEMBL:B9GF73,TrEMBL:B9RH26,TrEMBL:Q94F28;Derives_from=GSCOCT00038309001;Name=Cc11_g17420;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038309001~ Putative uncharacterized protein~ unknown_gene~ complete;original_location=complement(join(1682805..1682948%2C1679739..1679834));owner=coffea | |
| 76241 chr11 manual_curation exon 33404704 33405140 . - . Parent=GSCOCT00038309001 | |
| 76242 chr11 manual_curation exon 33408111 33408254 . - . Parent=GSCOCT00038309001 | |
| 76243 chr11 manual_curation CDS 33405045 33405140 . - 0 Parent=GSCOCT00038309001 | |
| 76244 chr11 manual_curation CDS 33408111 33408254 . - 0 Parent=GSCOCT00038309001 | |
| 76245 chr11 manual_curation gene 33430810 33440872 . + . ID=GSCOCG00038314001;Name=Cc11_g17430 | |
| 76246 chr11 manual_curation mRNA 33430810 33440872 . + . ID=GSCOCT00038314001;Parent=GSCOCG00038314001;Name=Cc11_g17430 | |
| 76247 chr11 manual_curation polypeptide 33431427 33440530 . + . ID=GSCOCP00038314001;Dbxref=GENE3D:G3DSA:3.40.50.920,InterPro:IPR005475,InterPro:IPR005476,InterPro:IPR009014,InterPro:IPR015941,PFAM:PF02779,PFAM:PF02780,SMART:SM00861,SUPERFAMILY:SSF52922,SwissProt:P52904,SwissProt:Q38799,SwissProt:Q86HX0,TAIR:AT1G30120.1,TAIR:AT2G34590.1,TAIR:AT5G50850.1,TrEMBL:A9P841,TrEMBL:B9GMQ4,TrEMBL:B9RFW4;Derives_from=GSCOCT00038314001;Name=Cc11_g17430;Ontology_term=CC_evidence_code:ISS,GO:0003824,GO:0008152,CC_EC_number:1.2.4.1,PRODUCT:Pyruvate dehydrogenase E1 component subunit beta%2C mitochondrial,CC_functional_completeness:complete,CC_gene:PDH2,CC_gene:pdhB;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038314001~ Pyruvate dehydrogenase E1 component subunit beta%2C mitochondrial~ PDH2~ complete;original_location=join(1706121..1706183%2C1706272..1706328%2C1706739..1706819%2C1706912..1706938%2C1707076..1707138%2C1707446..1707532%2C1713561..1713686%2C1714003..1714136%2C1714240..1714312%2C1714414..1714479%2C1714570..1714608%2C1714707..1714831%2C1714939..1715053%2C1715165..1715224);owner=coffea | |
| 76248 chr11 manual_curation exon 33430810 33431489 . + . Parent=GSCOCT00038314001 | |
| 76249 chr11 manual_curation exon 33431578 33431634 . + . Parent=GSCOCT00038314001 | |
| 76250 chr11 manual_curation exon 33432045 33432125 . + . Parent=GSCOCT00038314001 | |
| 76251 chr11 manual_curation exon 33432218 33432244 . + . Parent=GSCOCT00038314001 | |
| 76252 chr11 manual_curation exon 33432382 33432444 . + . Parent=GSCOCT00038314001 | |
| 76253 chr11 manual_curation exon 33432752 33432838 . + . Parent=GSCOCT00038314001 | |
| 76254 chr11 manual_curation exon 33438867 33438992 . + . Parent=GSCOCT00038314001 | |
| 76255 chr11 manual_curation exon 33439309 33439442 . + . Parent=GSCOCT00038314001 | |
| 76256 chr11 manual_curation exon 33439546 33439618 . + . Parent=GSCOCT00038314001 | |
| 76257 chr11 manual_curation exon 33439720 33439785 . + . Parent=GSCOCT00038314001 | |
| 76258 chr11 manual_curation exon 33439876 33439914 . + . Parent=GSCOCT00038314001 | |
| 76259 chr11 manual_curation exon 33440013 33440137 . + . Parent=GSCOCT00038314001 | |
| 76260 chr11 manual_curation exon 33440245 33440359 . + . Parent=GSCOCT00038314001 | |
| 76261 chr11 manual_curation exon 33440471 33440872 . + . Parent=GSCOCT00038314001 | |
| 76262 chr11 manual_curation CDS 33431427 33431489 . + 0 Parent=GSCOCT00038314001 | |
| 76263 chr11 manual_curation CDS 33431578 33431634 . + 0 Parent=GSCOCT00038314001 | |
| 76264 chr11 manual_curation CDS 33432045 33432125 . + 0 Parent=GSCOCT00038314001 | |
| 76265 chr11 manual_curation CDS 33432218 33432244 . + 0 Parent=GSCOCT00038314001 | |
| 76266 chr11 manual_curation CDS 33432382 33432444 . + 0 Parent=GSCOCT00038314001 | |
| 76267 chr11 manual_curation CDS 33432752 33432838 . + 0 Parent=GSCOCT00038314001 | |
| 76268 chr11 manual_curation CDS 33438867 33438992 . + 0 Parent=GSCOCT00038314001 | |
| 76269 chr11 manual_curation CDS 33439309 33439442 . + 0 Parent=GSCOCT00038314001 | |
| 76270 chr11 manual_curation CDS 33439546 33439618 . + 2 Parent=GSCOCT00038314001 | |
| 76271 chr11 manual_curation CDS 33439720 33439785 . + 0 Parent=GSCOCT00038314001 | |
| 76272 chr11 manual_curation CDS 33439876 33439914 . + 0 Parent=GSCOCT00038314001 | |
| 76273 chr11 manual_curation CDS 33440013 33440137 . + 0 Parent=GSCOCT00038314001 | |
| 76274 chr11 manual_curation CDS 33440245 33440359 . + 2 Parent=GSCOCT00038314001 | |
| 76275 chr11 manual_curation CDS 33440471 33440530 . + 0 Parent=GSCOCT00038314001 | |
| 76276 chr11 manual_curation gene 33444197 33445875 . - . ID=GSCOCG00038316001;Name=Cc11_g17440 | |
| 76277 chr11 manual_curation mRNA 33444197 33445875 . - . ID=GSCOCT00038316001;Parent=GSCOCG00038316001;Name=Cc11_g17440 | |
| 76278 chr11 manual_curation polypeptide 33444197 33445538 . - . ID=GSCOCP00038316001;Dbxref=InterPro:IPR001202,SUPERFAMILY:SSF51045,TAIR:AT1G28070.1,TAIR:AT2G33510.2,TrEMBL:D7U611,TrEMBL:O22801,TrEMBL:Q7XBE3;Derives_from=GSCOCT00038316001;Name=Cc11_g17440;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Putative unknown protein%3B BEST Arabidopsis thaliana protein match is,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038316001~ Putative unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33510.1)%3B Has 85 Blast hits to 77 proteins in 15 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 85%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).~ unknown_gene~ complete;original_location=complement(join(1719978..1720232%2C1718891..1719343));owner=coffea | |
| 76279 chr11 manual_curation exon 33444197 33444649 . - . Parent=GSCOCT00038316001 | |
| 76280 chr11 manual_curation exon 33445284 33445875 . - . Parent=GSCOCT00038316001 | |
| 76281 chr11 manual_curation CDS 33444197 33444649 . - 0 Parent=GSCOCT00038316001 | |
| 76282 chr11 manual_curation CDS 33445284 33445538 . - 0 Parent=GSCOCT00038316001 | |
| 76283 chr11 manual_curation gene 33450660 33452875 . + . ID=GSCOCG00038317001;Name=Cc11_g17450 | |
| 76284 chr11 manual_curation mRNA 33450660 33452875 . + . ID=GSCOCT00038317001;Parent=GSCOCG00038317001;Name=Cc11_g17450 | |
| 76285 chr11 manual_curation polypeptide 33451076 33452308 . + . ID=GSCOCP00038317001;Dbxref=InterPro:IPR006629,PFAM:PF10601,SMART:SM00714,TAIR:AT5G13190.1,TrEMBL:A5ACU3,TrEMBL:B9RFX0,TrEMBL:D7U609;Derives_from=GSCOCT00038317001;Name=Cc11_g17450;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:CONTAINS InterPro DOMAIN/s,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038317001~ CONTAINS InterPro DOMAIN/s: LPS-induced tumor necrosis factor alpha factor (InterPro:IPR006629)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).~ unknown_gene~ complete;original_location=join(1725770..1725954%2C1726668..1726794%2C1726919..1727002);owner=coffea | |
| 76286 chr11 manual_curation exon 33450660 33451260 . + . Parent=GSCOCT00038317001 | |
| 76287 chr11 manual_curation exon 33451974 33452100 . + . Parent=GSCOCT00038317001 | |
| 76288 chr11 manual_curation exon 33452225 33452875 . + . Parent=GSCOCT00038317001 | |
| 76289 chr11 manual_curation CDS 33451076 33451260 . + 0 Parent=GSCOCT00038317001 | |
| 76290 chr11 manual_curation CDS 33451974 33452100 . + 2 Parent=GSCOCT00038317001 | |
| 76291 chr11 manual_curation CDS 33452225 33452308 . + 0 Parent=GSCOCT00038317001 | |
| 76292 chr11 manual_curation gene 33459676 33464019 . + . ID=GSCOCG00038318001;Name=Cc11_g17460 | |
| 76293 chr11 manual_curation mRNA 33459676 33464019 . + . ID=GSCOCT00038318001;Parent=GSCOCG00038318001;Name=Cc11_g17460 | |
| 76294 chr11 manual_curation polypeptide 33460637 33463611 . + . ID=GSCOCP00038318001;Dbxref=InterPro:IPR010402,PFAM:PF06203,PROFILE:PS51017,SwissProt:O22800,SwissProt:O82256,SwissProt:Q9C7E8,TAIR:AT1G28050.1,TAIR:AT2G33500.1,TAIR:AT2G47890.1,TrEMBL:B9RFW9,TrEMBL:D9ZIW6,TrEMBL:F6I1P2;Derives_from=GSCOCT00038318001;Name=Cc11_g17460;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative uncharacterized protein,CC_functional_completeness:fragment,CC_gene:COL15,CC_gene:COL14,CC_gene:COL13;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038318001~ Putative uncharacterized protein~ COL15~ fragment;original_location=join(1735331..1735783%2C1737051..1737251%2C1737833..1738092%2C1738203..1738305);owner=coffea | |
| 76295 chr11 manual_curation exon 33459676 33461089 . + . Parent=GSCOCT00038318001 | |
| 76296 chr11 manual_curation exon 33462357 33462557 . + . Parent=GSCOCT00038318001 | |
| 76297 chr11 manual_curation exon 33463139 33463398 . + . Parent=GSCOCT00038318001 | |
| 76298 chr11 manual_curation exon 33463509 33464019 . + . Parent=GSCOCT00038318001 | |
| 76299 chr11 manual_curation CDS 33460637 33461089 . + 0 Parent=GSCOCT00038318001 | |
| 76300 chr11 manual_curation CDS 33462357 33462557 . + 0 Parent=GSCOCT00038318001 | |
| 76301 chr11 manual_curation CDS 33463139 33463398 . + 0 Parent=GSCOCT00038318001 | |
| 76302 chr11 manual_curation CDS 33463509 33463611 . + 2 Parent=GSCOCT00038318001 | |
| 76303 chr11 manual_curation gene 33464719 33465977 . + . ID=GSCOCG00038319001;Name=Cc11_g17470 | |
| 76304 chr11 manual_curation mRNA 33464719 33465977 . + . ID=GSCOCT00038319001;Parent=GSCOCG00038319001;Name=Cc11_g17470 | |
| 76305 chr11 manual_curation polypeptide 33464746 33465621 . + . ID=GSCOCP00038319001;Dbxref=TrEMBL:B9GLA9,TrEMBL:B9SBL8,TrEMBL:O65592;Derives_from=GSCOCT00038319001;Name=Cc11_g17470;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Predicted protein,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038319001~ Putative Predicted protein~ unknown_gene~ complete;original_location=1739440..1740315;owner=coffea | |
| 76306 chr11 manual_curation exon 33464719 33465977 . + . Parent=GSCOCT00038319001 | |
| 76307 chr11 manual_curation CDS 33464746 33465621 . + 0 Parent=GSCOCT00038319001 | |
| 76308 chr11 manual_curation gene 33475152 33479701 . + . ID=GSCOCG00038320001;Name=Cc11_g17480 | |
| 76309 chr11 manual_curation mRNA 33475152 33479701 . + . ID=GSCOCT00038320001;Parent=GSCOCG00038320001;Name=Cc11_g17480 | |
| 76310 chr11 manual_curation polypeptide 33475178 33478676 . + . ID=GSCOCP00038320001;Dbxref=InterPro:IPR001611,InterPro:IPR013210,PFAM:PF00560,PFAM:PF08263,SwissProt:Q94AG2,SwissProt:Q94F62,SwissProt:Q9XIC7,TAIR:AT1G71830.1,TAIR:AT3G43740.2,TAIR:AT5G21090.1,TrEMBL:B9GMQ6,TrEMBL:B9RFW6,TrEMBL:D7U606;Derives_from=GSCOCT00038320001;Name=Cc11_g17480;Ontology_term=CC_evidence_code:ISS,GO:0005515,CC_EC_number:missing_EC_number,PRODUCT:Somatic embryogenesis receptor kinase 1,CC_functional_completeness:fragment,CC_gene:SERK1,CC_gene:SERK2,CC_gene:BAK1;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038320001~ Somatic embryogenesis receptor kinase 1~ SERK1~ fragment;original_location=join(1749872..1749956%2C1750219..1750351%2C1751550..1751621%2C1752170..1752313%2C1752919..1752990%2C1753119..1753190%2C1753295..1753370);owner=coffea | |
| 76311 chr11 manual_curation exon 33475152 33475262 . + . Parent=GSCOCT00038320001 | |
| 76312 chr11 manual_curation exon 33475525 33475657 . + . Parent=GSCOCT00038320001 | |
| 76313 chr11 manual_curation exon 33476856 33476927 . + . Parent=GSCOCT00038320001 | |
| 76314 chr11 manual_curation exon 33477476 33477619 . + . Parent=GSCOCT00038320001 | |
| 76315 chr11 manual_curation exon 33478225 33478296 . + . Parent=GSCOCT00038320001 | |
| 76316 chr11 manual_curation exon 33478425 33478496 . + . Parent=GSCOCT00038320001 | |
| 76317 chr11 manual_curation exon 33478601 33479701 . + . Parent=GSCOCT00038320001 | |
| 76318 chr11 manual_curation CDS 33475178 33475262 . + 0 Parent=GSCOCT00038320001 | |
| 76319 chr11 manual_curation CDS 33475525 33475657 . + 1 Parent=GSCOCT00038320001 | |
| 76320 chr11 manual_curation CDS 33476856 33476927 . + 2 Parent=GSCOCT00038320001 | |
| 76321 chr11 manual_curation CDS 33477476 33477619 . + 2 Parent=GSCOCT00038320001 | |
| 76322 chr11 manual_curation CDS 33478225 33478296 . + 2 Parent=GSCOCT00038320001 | |
| 76323 chr11 manual_curation CDS 33478425 33478496 . + 2 Parent=GSCOCT00038320001 | |
| 76324 chr11 manual_curation CDS 33478601 33478676 . + 2 Parent=GSCOCT00038320001 | |
| 76325 chr11 manual_curation gene 33481680 33486662 . - . ID=GSCOCG00038321001;Name=Cc11_g17490 | |
| 76326 chr11 manual_curation mRNA 33481680 33486662 . - . ID=GSCOCT00038321001;Parent=GSCOCG00038321001;Name=Cc11_g17490 | |
| 76327 chr11 manual_curation polypeptide 33481680 33486662 . - . ID=GSCOCP00038321001;Dbxref=InterPro:IPR004148,PFAM:PF03114,SwissProt:O22799,TAIR:AT2G33490.1,TAIR:AT3G26910.2,TAIR:AT5G41100.1,TrEMBL:B9RFW5,TrEMBL:D7U605,TrEMBL:G7KWK2;Derives_from=GSCOCT00038321001;Name=Cc11_g17490;Ontology_term=CC_evidence_code:ISS,GO:0005515,GO:0005737,CC_EC_number:missing_EC_number,PRODUCT:Putative Uncharacterized protein At2g33490,CC_functional_completeness:complete,CC_gene:At2g33490;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038321001~ Putative Uncharacterized protein At2g33490~ At2g33490~ complete;original_location=complement(join(1761287..1761356%2C1760623..1760697%2C1759804..1759865%2C1759650..1759718%2C1759452..1759480%2C1759162..1759369%2C1758809..1759072%2C1757926..1757979%2C1756374..1757366));owner=coffea | |
| 76328 chr11 manual_curation exon 33481680 33482672 . - . Parent=GSCOCT00038321001 | |
| 76329 chr11 manual_curation exon 33483232 33483285 . - . Parent=GSCOCT00038321001 | |
| 76330 chr11 manual_curation exon 33484115 33484378 . - . Parent=GSCOCT00038321001 | |
| 76331 chr11 manual_curation exon 33484468 33484675 . - . Parent=GSCOCT00038321001 | |
| 76332 chr11 manual_curation exon 33484758 33484786 . - . Parent=GSCOCT00038321001 | |
| 76333 chr11 manual_curation exon 33484956 33485024 . - . Parent=GSCOCT00038321001 | |
| 76334 chr11 manual_curation exon 33485110 33485171 . - . Parent=GSCOCT00038321001 | |
| 76335 chr11 manual_curation exon 33485929 33486003 . - . Parent=GSCOCT00038321001 | |
| 76336 chr11 manual_curation exon 33486593 33486662 . - . Parent=GSCOCT00038321001 | |
| 76337 chr11 manual_curation CDS 33481680 33482672 . - 0 Parent=GSCOCT00038321001 | |
| 76338 chr11 manual_curation CDS 33483232 33483285 . - 0 Parent=GSCOCT00038321001 | |
| 76339 chr11 manual_curation CDS 33484115 33484378 . - 0 Parent=GSCOCT00038321001 | |
| 76340 chr11 manual_curation CDS 33484468 33484675 . - 2 Parent=GSCOCT00038321001 | |
| 76341 chr11 manual_curation CDS 33484758 33484786 . - 0 Parent=GSCOCT00038321001 | |
| 76342 chr11 manual_curation CDS 33484956 33485024 . - 0 Parent=GSCOCT00038321001 | |
| 76343 chr11 manual_curation CDS 33485110 33485171 . - 1 Parent=GSCOCT00038321001 | |
| 76344 chr11 manual_curation CDS 33485929 33486003 . - 1 Parent=GSCOCT00038321001 | |
| 76345 chr11 manual_curation CDS 33486593 33486662 . - 0 Parent=GSCOCT00038321001 | |
| 76346 chr11 manual_curation gene 33507866 33508817 . + . ID=GSCOCG00038323001;Name=Cc11_g17500 | |
| 76347 chr11 manual_curation mRNA 33507866 33508817 . + . ID=GSCOCT00038323001;Parent=GSCOCG00038323001;Name=Cc11_g17500 | |
| 76348 chr11 manual_curation polypeptide 33507866 33508817 . + . ID=GSCOCP00038323001;Dbxref=TAIR:AT1G28080.1,TAIR:AT5G13250.1,TrEMBL:B9GMR4,TrEMBL:B9RFX8,TrEMBL:G7KSY5;Derives_from=GSCOCT00038323001;Name=Cc11_g17500;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Predicted protein,CC_functional_completeness:fragment,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038323001~ Predicted protein~ unknown_gene~ fragment;original_location=join(1782560..1782972%2C1783193..1783243%2C1783385..1783511);owner=coffea | |
| 76349 chr11 manual_curation exon 33507866 33508278 . + . Parent=GSCOCT00038323001 | |
| 76350 chr11 manual_curation exon 33508499 33508549 . + . Parent=GSCOCT00038323001 | |
| 76351 chr11 manual_curation exon 33508691 33508817 . + . Parent=GSCOCT00038323001 | |
| 76352 chr11 manual_curation CDS 33507866 33508278 . + 0 Parent=GSCOCT00038323001 | |
| 76353 chr11 manual_curation CDS 33508499 33508549 . + 2 Parent=GSCOCT00038323001 | |
| 76354 chr11 manual_curation CDS 33508691 33508817 . + 2 Parent=GSCOCT00038323001 | |
| 76355 chr11 manual_curation gene 33526867 33528402 . + . ID=GSCOCG00038325001;Name=Cc11_g17510 | |
| 76356 chr11 manual_curation mRNA 33526867 33528402 . + . ID=GSCOCT00038325001;Parent=GSCOCG00038325001;Name=Cc11_g17510 | |
| 76357 chr11 manual_curation polypeptide 33526930 33528073 . + . ID=GSCOCP00038325001;Dbxref=HAMAP:MF_01217,InterPro:IPR003231,InterPro:IPR006162,InterPro:IPR006163,InterPro:IPR009081,InterPro:IPR020806,PFAM:PF00550,PROFILE:PS50075,PROSITE:PS00012,SMART:SM00823,SUPERFAMILY:SSF47336,SwissProt:P52411,SwissProt:P52413,SwissProt:P93092,TAIR:AT1G54580.1,TAIR:AT1G54630.1,TAIR:AT4G25050.2,TIGRFAMs:TIGR00517,TrEMBL:B9I3Y4,TrEMBL:D7TYT3,TrEMBL:I1KP35;Derives_from=GSCOCT00038325001;Name=Cc11_g17510;Ontology_term=CC_evidence_code:ISS,GO:0000036,GO:0006633,GO:0031177,GO:0048037,CC_EC_number:missing_EC_number,PRODUCT:Acyl carrier protein 1%2C chloroplastic,CC_functional_completeness:complete,CC_gene:ACP1,CC_gene:ACL1.1,CC_gene:ACL1.3;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038325001~ Acyl carrier protein 1%2C chloroplastic~ ACP1~ complete;original_location=join(1801624..1801698%2C1802129..1802230%2C1802344..1802466%2C1802630..1802767);owner=coffea | |
| 76358 chr11 manual_curation exon 33526867 33527004 . + . Parent=GSCOCT00038325001 | |
| 76359 chr11 manual_curation exon 33527435 33527536 . + . Parent=GSCOCT00038325001 | |
| 76360 chr11 manual_curation exon 33527650 33527772 . + . Parent=GSCOCT00038325001 | |
| 76361 chr11 manual_curation exon 33527936 33528402 . + . Parent=GSCOCT00038325001 | |
| 76362 chr11 manual_curation CDS 33526930 33527004 . + 0 Parent=GSCOCT00038325001 | |
| 76363 chr11 manual_curation CDS 33527435 33527536 . + 0 Parent=GSCOCT00038325001 | |
| 76364 chr11 manual_curation CDS 33527650 33527772 . + 0 Parent=GSCOCT00038325001 | |
| 76365 chr11 manual_curation CDS 33527936 33528073 . + 0 Parent=GSCOCT00038325001 | |
| 76366 chr11 manual_curation gene 33534437 33534898 . + . ID=GSCOCG00038326001;Name=Cc11_g17520 | |
| 76367 chr11 manual_curation mRNA 33534437 33534898 . + . ID=GSCOCT00038326001;Parent=GSCOCG00038326001;Name=Cc11_g17520 | |
| 76368 chr11 manual_curation polypeptide 33534505 33534774 . + . ID=GSCOCP00038326001;Dbxref=InterPro:IPR022251,PFAM:PF12609;Derives_from=GSCOCT00038326001;Name=Cc11_g17520;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Putative Protein of unknown function wound-induced,CC_functional_completeness:complete,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038326001~ Putative Protein of unknown function wound-induced~ unknown_gene~ complete;original_location=1809199..1809468;owner=coffea | |
| 76369 chr11 manual_curation exon 33534437 33534898 . + . Parent=GSCOCT00038326001 | |
| 76370 chr11 manual_curation CDS 33534505 33534774 . + 0 Parent=GSCOCT00038326001 | |
| 76371 chr11 manual_curation gene 33536746 33538065 . + . ID=GSCOCG00038328001;Name=Cc11_g17530 | |
| 76372 chr11 manual_curation mRNA 33536746 33538065 . + . ID=GSCOCT00038328001;Parent=GSCOCG00038328001;Name=Cc11_g17530 | |
| 76373 chr11 manual_curation polypeptide 33536746 33536928 . + . ID=GSCOCP00038328001;Derives_from=GSCOCT00038328001;Name=Cc11_g17530;Ontology_term=CC_evidence_code:ISS,CC_EC_number:missing_EC_number,PRODUCT:Hypothetical protein,CC_functional_completeness:missing_functional_completeness,CC_gene:unknown_gene;alternative_location=no_alternative_location;annotator_comment=missing_annotator_comment;date=Tue Jul 31 10:05:06 CEST 2012;inference={gaze};note=GSCOCT00038328001~ Hypothetical protein~ unknown_gene~ missing_functional_completeness;original_location=1811440..1811622;owner=coffea | |
| 76374 chr11 manual_curation exon 33536746 33538065 . + . Parent=GSCOCT00038328001 | |
| 76375 chr11 manual_curation CDS 33536746 33536928 . + 0 Parent=GSCOCT00038328001 |